PeakID (cmd=annotatePeaks.pl /hpc/users/watanh02/watanabe/ChIPseq/MAnorm2/ck1750_unc0638/ck1750_unc0638_MAnorm_result_homer.bed mm9)	Chr	Start	End	Strand	Peak Score	Focus Ratio/Region Size	Annotation	Detailed Annotation	Distance to TSS	Nearest PromoterID	Entrez ID	Nearest Unigene	Nearest Refseq	Nearest Ensembl	Gene Name	Gene Alias	Gene Description	Gene Type
unique_peak1-4201-9-3-1.18961340640422-1.57096726280955	chr2	118529333	118529889	+	0	NA	promoter-TSS (NM_001081971)	promoter-TSS (NM_001081971)	88	NM_001081971	383787	Mm.35758	NM_001081971	ENSMUSG00000078137	Ankrd63	Gm1337	ankyrin repeat domain 63	protein-coding
common_peak2-24931-52-86--0.334683505583029-0.706720175003303	chr17	88255635	88257147	+	0	NA	Intergenic	MMETn-int|LTR|ERVK	-59057	NM_199251	210741	Mm.312046	NM_199251	ENSMUSG00000050138	Kcnk12	mntk1	potassium channel, subfamily K, member 12	protein-coding
unique_peak1-1965-10-1-2.35641534500877-2.57096726280955	chr14	106163686	106164234	+	0	NA	Intergenic	RLTR10C|LTR|ERVK	132076	NM_011897	24064	Mm.89982	NM_011897	ENSMUSG00000022114	Spry2	sprouty2	sprouty homolog 2 (Drosophila)	protein-coding
unique_peak2-34324-7-25--1.9013488878429-2.63337704757512	chr13	97007217	97007812	+	0	NA	Intergenic	Intergenic	-104982	NM_029210	75209	Mm.40436	NM_029210	ENSMUSG00000051111	Sv2c	4930527L09Rik|AI841971	synaptic vesicle glycoprotein 2c	protein-coding
common_peak2-28281-16-16-0.0308008010177225-0.307611222530525	chr4	129741699	129742278	+	0	NA	intron (NM_028266, intron 27 of 69)	intron (NM_028266, intron 27 of 69)	16904	NM_028266	107581	Mm.41860	NM_028266	ENSMUSG00000040690	Col16a1	2700007F12Rik|A530052M23Rik|AI838662|CA1F	collagen, type XVI, alpha 1	protein-coding
common_peak1-12073-18-7-1.31291915122835-1.71830443967823	chr17	24208871	24209517	+	0	NA	intron (NM_027008, intron 1 of 5)	intron (NM_027008, intron 1 of 5)	1258	NM_027008	69259	Mm.28171	NM_027008	ENSMUSG00000016946	Kctd5	2610030N08Rik|mKIAA0176	potassium channel tetramerisation domain containing 5	protein-coding
common_peak2-24100-36-40-0.121769081549671-0.36493371439645	chr16	32430310	32431506	+	0	NA	promoter-TSS (NM_001163160)	promoter-TSS (NM_001163160)	-99	NM_009981	13026	Mm.98775	NM_009981	ENSMUSG00000005615	Pcyt1a	CTalpha|Cctalpha|Ctpct|Cttalpha	phosphate cytidylyltransferase 1, choline, alpha isoform	protein-coding
common_peak2-31653-8-10--0.454209200689727-1.078512453669	chr8	126538571	126539092	+	0	NA	intron (NM_133966, intron 1 of 4)	intron (NM_133966, intron 1 of 4)	6378	NM_133966	102162	Mm.291777	NM_133966	ENSMUSG00000038697	Taf5l	1110005N04Rik|AI849020	TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor	protein-coding
common_peak2-23171-128-250--0.306537551872696-1.36183038402612	chr15	12320409	12322495	+	0	NA	intron (NM_001081064, intron 13 of 23)	L1_Mus1|LINE|L1	70201	NM_025673	66629	Mm.157655	NM_025673	ENSMUSG00000022200	Golph3	4733401N08Rik|5730410D03Rik|AW413496	golgi phosphoprotein 3	protein-coding
unique_peak2-37689-3-9--1.73591118484664-1.57096726280955	chr5	99250309	99250748	+	0	NA	Intergenic	Intergenic	-32930	NM_173404	110075	Mm.209571	NM_173404	ENSMUSG00000029335	Bmp3	9130206H07|9530029I04Rik	bone morphogenetic protein 3	protein-coding
common_peak1-17061-21-13-0.762134343208631-1.0220094258199	chr6	99175046	99175931	+	0	NA	intron (NM_053202, intron 3 of 18)	intron (NM_053202, intron 3 of 18)	41021	NM_001197321	108655	Mm.234965	NM_053202	ENSMUSG00000030067	Foxp1	3110052D19Rik|4932443N09Rik|AI461938|AW494214	forkhead box P1	protein-coding
common_peak2-31314-7-15--1.20090916970181-0.947446088118041	chr8	79207059	79207588	+	0	NA	Intergenic	Intergenic	216749	NR_028579	100039211	Mm.367571	NR_028579	ENSMUSG00000074235	Gm10649	ENSMUSG00000074235	predicted gene 10649	ncRNA
unique_peak2-33912-5-14--1.61127093161437-1.95509489018123	chr12	65114579	65115144	+	0	NA	Intergenic	MTE2b|LTR|MaLR	461024	NM_001163271	623046	Mm.189552	NM_001163271	ENSMUSG00000043060	Fscb	EG623046	fibrous sheath CABYR binding protein	protein-coding
common_peak1-18975-10-24--1.28744084476596-1.59083646988122	chr9	56089957	56090404	+	0	NA	intron (NM_172924, intron 4 of 6)	B4A|SINE|B4	-81303	NM_019793	56434	Mm.28484	NM_019793	ENSMUSG00000032324	Tspan3	1700055K04Rik|TM4-A|Tm4sf8	tetraspanin 3	protein-coding
common_peak1-11928-48-44-0.47907405490514-1.03754770036046	chr17	70745429	70747147	+	0	NA	Intergenic	Intergenic	-27844	NM_177639	224997	Mm.311840	NM_027712	ENSMUSG00000003279	Dlgap1	4933422O14Rik|9630002F18|AI845682|AI848168|BB075781|D17Bwg0511e|GKAP/SAPAP|GKPA/SAPAP|Gkap|Sapap1|mKIAA4162	discs, large (Drosophila) homolog-associated protein 1	protein-coding
common_peak2-25472-16-16-0.0308008010177225-0.307611222530525	chr19	4477848	4478662	+	0	NA	Intergenic	Intergenic	-1112	NM_134164	171180	Mm.262270	NM_134164	ENSMUSG00000049303	Syt12	-	synaptotagmin XII	protein-coding
unique_peak1-1709-10-3-1.35641534500877-1.75805390616669	chr13	92595707	92596224	+	0	NA	intron (NM_009027, intron 9 of 23)	intron (NM_009027, intron 9 of 23)	305484	NM_009027	19418	Mm.248630	NM_009027		Rasgrf2	6330417G04Rik|AW048350|Grf2|Ras-GRF2	RAS protein-specific guanine nucleotide-releasing factor 2	protein-coding
common_peak1-18036-20-12-0.787635066450101-0.949240599462708	chr7	143599257	143600091	+	0	NA	Intergenic	Intergenic	-58576	NR_040459	330664	Mm.127762	NR_040459		C230079O03Rik	C230079O03	RIKEN cDNA C230079O03 gene	ncRNA
unique_peak2-35562-4-13--1.83081543591085-2.04196296489515	chr17	66101693	66102036	+	0	NA	intron (NM_133685, intron 1 of 6)	intron (NM_133685, intron 1 of 6)	20228	NM_133685	106572	Mm.29274	NM_133685	ENSMUSG00000056515	Rab31	1700093E07Rik|AI415285|Rab22B	RAB31, member RAS oncogene family	protein-coding
common_peak2-31942-50-58-0.158297267117111-0.413183870294151	chr9	64123907	64125757	+	0	NA	Intergenic	ID4_|SINE|ID	-4582	NM_025372	66131	Mm.196219	NM_025372	ENSMUSG00000032397	Tipin	1110005A05Rik|1110018P21Rik	timeless interacting protein	protein-coding
common_peak2-31524-47-69--0.194441592178419-0.408000828620178	chr8	109736887	109737807	+	0	NA	Intergenic	Intergenic	62786	NM_025558	66427	Mm.20242	NM_025558	ENSMUSG00000031924	Cyb5b	1810044O22Rik|AU015618|Cyb5m	cytochrome b5 type B	protein-coding
common_peak2-26301-25-40--0.495702099272978-0.683454027796267	chr2	32342483	32343757	+	0	NA	Intergenic	B3|SINE|B2	-36130	NM_146118	227731	Mm.37395	NM_146118	ENSMUSG00000026819	Slc25a25	1110030N17Rik|MCSC|mKIAA1896	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25	protein-coding
unique_peak1-4347-9-0-3.18961340640422-3.01029995663981	chr2	154893030	154893607	+	0	NA	intron (NM_016661, intron 2 of 9)	B1F|SINE|Alu	6915	NM_016661	269378	Mm.330692	NM_016661	ENSMUSG00000027597	Ahcy	AA987153|AL024110|CuBP|SAHH	S-adenosylhomocysteine hydrolase	protein-coding
common_peak2-20246-75-138--0.379874080980223-1.15506639971691	chr1	184033068	184034228	+	0	NA	Intergenic	Intergenic	-21220	NM_012058	27058	Mm.303071	NM_012058	ENSMUSG00000026511	Srp9	9kDa	signal recognition particle 9	protein-coding
unique_peak2-36436-1-7--2.62705701021674-1.80617997398389	chr2	131945007	131945268	+	0	NA	intron (NM_018824, intron 1 of 15)	intron (NM_018824, intron 1 of 15)	25707	NM_018824	54338	Mm.103581	NM_018824	ENSMUSG00000027340	Slc23a2	AI844736|NBTL1|SVCT2|Slc23a1|YSPL2|YSPL3|mKIAA0238	solute carrier family 23 (nucleobase transporters), member 2	protein-coding
unique_peak2-37527-9-10--0.269818212233077-1.05503135781948	chr5	24039492	24040086	+	0	NA	intron (NM_080444, intron 4 of 5)	intron (NM_080444, intron 4 of 5)	6477	NM_080444	117590	Mm.207071	NM_080444	ENSMUSG00000038204	Asb10	Asb-10|BB137407	ankyrin repeat and SOCS box-containing 10	protein-coding
common_peak2-21872-13-11-0.193509529916613-0.379391706698377	chr12	70712780	70713392	+	0	NA	intron (NM_001135559, intron 12 of 22)	B1_Mus1|SINE|Alu	-29071	NM_001033236	207965	Mm.102487	NM_001033236	ENSMUSG00000049882	Vcpkmt	Gm71|Mettl21d|Mettl221d|VCP-KMT	valosin containing protein lysine (K) methyltransferase	protein-coding
unique_peak1-3635-14-6-1.09186123830004-1.16633110333236	chr19	37960110	37960652	+	0	NA	Intergenic	Intergenic	157686	NM_001099634	226101	Mm.34674	NM_177035	ENSMUSG00000048612	Myof	2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3	myoferlin	protein-coding
common_peak2-29804-9-5-0.604650905683064-1.21398586181642	chr6	91076511	91076787	+	0	NA	Intergenic	L1MB7|LINE|L1	-9829	NM_018815	54563	Mm.28162	NM_018815	ENSMUSG00000030091	Nup210	9830001L10|AI836801|Pom210|gp190|gp210	nucleoporin 210	protein-coding
common_peak1-12410-18-17-0.142994149786039-0.353907621462753	chr17	72954990	72955668	+	0	NA	Intergenic	Intergenic	-1682	NM_007439	11682	Mm.311854	NM_007439	ENSMUSG00000055471	Alk	CD246|Tcrz	anaplastic lymphoma kinase	protein-coding
unique_peak1-4795-9-4-0.867685311516858-1.36011389749466	chr3	132873147	132873745	+	0	NA	intron (NM_029953, intron 1 of 3)	Lx3_Mus|LINE|L1	24407	NM_029953	77669	Mm.98630	NM_029953	ENSMUSG00000040969	Arhgef38	9130221D24Rik	Rho guanine nucleotide exchange factor (GEF) 38	protein-coding
unique_peak1-4898-8-1-2.00522241794757-2.05605744720049	chr4	45473562	45474054	+	0	NA	intron (NM_001033306, intron 2 of 5)	intron (NM_001033306, intron 2 of 5)	-52170	NM_001009949	230125	Mm.260210	NM_001009949	ENSMUSG00000045973	Slc25a51	9130208E07Rik|D130005A03Rik|Gm138|Mcart1	solute carrier family 25, member 51	protein-coding
common_peak1-15691-13-10-0.319040412000471-0.446472590016315	chr4	139231675	139232390	+	0	NA	Intergenic	Intergenic	22579	NM_031873	83770	Mm.190612	NM_031873	ENSMUSG00000028738	Tas1r2	Gpr71|T1r2|TR2	taste receptor, type 1, member 2	protein-coding
common_peak1-12562-88-148--0.203756111291629-0.584249270791306	chr18	9957247	9958938	+	0	NA	promoter-TSS (NM_153552)	promoter-TSS (NM_153552)	-86	NM_153552	225160	Mm.219648	NM_153552	ENSMUSG00000024287	Thoc1	3110002N20Rik|AW107452|NMP-84	THO complex 1	protein-coding
unique_peak2-39696-2-6--1.72480917832092-1.26211192963361	chr9	110848973	110849202	+	0	NA	promoter-TSS (NM_011562)	promoter-TSS (NM_011562)	-425	NM_011562	21667	Mm.5090	NM_011562	ENSMUSG00000032494	Tdgf1	CR1|cripto	teratocarcinoma-derived growth factor 1	protein-coding
unique_peak2-35233-7-12--0.901348887842903-1.31827279259406	chr16	92683718	92684234	+	0	NA	intron (NM_001111022, intron 4 of 6)	intron (NM_001111022, intron 4 of 6)	13598	NM_001111023	12394	Mm.4081	NM_009821	ENSMUSG00000022952	Runx1	AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b	runt related transcription factor 1	protein-coding
common_peak1-7509-36-63--0.520678913832246-0.955521670249469	chr1	16618233	16619393	+	0	NA	Intergenic	(TC)n|Simple_repeat|Simple_repeat	-9394	NM_001271017	66799	Mm.122430	NM_025773	ENSMUSG00000025939	Ube2w	6130401J04Rik	ubiquitin-conjugating enzyme E2W (putative)	protein-coding
common_peak1-18960-28-43--0.406472498815835-0.587580258678924	chr9	53383682	53384737	+	0	NA	TTS (NM_001081152)	TTS (NM_001081152)	34246	NM_144784	110446	Mm.293233	NM_144784	ENSMUSG00000032047	Acat1	6330585C21Rik|Acat	acetyl-Coenzyme A acetyltransferase 1	protein-coding
common_peak2-28873-12-20--0.743541437691122-0.625923329873571	chr5	76974738	76975231	+	0	NA	intron (NM_027270, intron 9 of 19)	intron (NM_027270, intron 9 of 19)	16648	NM_001289770	69940	Mm.403233	NM_027270	ENSMUSG00000036435	Exoc1	2810407P21Rik|A730011E05Rik|SEC3|Sec3l1|Sec3p	exocyst complex component 1	protein-coding
common_peak2-29056-8-7-0.00522241794757061-1.00793137938329	chr5	115651939	115652287	+	0	NA	Intergenic	Intergenic	-15983	NM_013879	29867	Mm.38551	NM_013879	ENSMUSG00000029544	Cabp1	caldendrin	calcium binding protein 1	protein-coding
unique_peak2-37158-1-7--2.62705701021674-1.80617997398389	chr4	41123867	41124311	+	0	NA	intron (NM_026275, intron 2 of 4)	B2_Mm1a|SINE|B2	41035	NM_026275	67615	Mm.389540	NM_026275	ENSMUSG00000036241	Ube2r2	1200003M11Rik|Cdc34b|Ubc3b	ubiquitin-conjugating enzyme E2R 2	protein-coding
common_peak1-16299-18-27--0.494435770829252-0.528262014464654	chr5	113908045	113908814	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-11038	NM_177292	320916	Mm.102783	NM_177292	ENSMUSG00000063430	Wscd2	4933413A10Rik|C530024P05Rik|Gm450	WSC domain containing 2	protein-coding
common_peak2-23109-12-6-0.841421063030034-1.58711810488664	chr14	79397689	79398055	+	0	NA	intron (NM_027906, intron 16 of 44)	L1Md_T|LINE|L1	148887	NM_173758	219189	Mm.159651	NM_027906	ENSMUSG00000058997	Vwa8	1300010F03Rik|4932416F07Rik|AI957255|Kiaa0564|mKIAA0564	von Willebrand factor A domain containing 8	protein-coding
common_peak1-17499-12-12--0.0516637330534535-0.309718203022949	chr7	25297315	25298021	+	0	NA	intron (NR_110958, intron 2 of 2)	intron (NR_110958, intron 2 of 2)	5562	NR_110958	232969	Mm.181332	NM_146183	ENSMUSG00000064264	Zfp428	2410005H09Rik|AV271806|AW047854|Znf428	zinc finger protein 428	protein-coding
unique_peak1-7249-13-4-1.45654393575041-2.23384849113406	chr9	78229936	78230684	+	0	NA	Intergenic	ORR1A2|LTR|MaLR	-3915	NM_026480	67968	Mm.26883	NM_026480		Ooep	2410146L05Rik|Floped|Moep19|Sddr	oocyte expressed protein	protein-coding
unique_peak1-2685-9-0-3.18961340640422-3.01029995663981	chr16	66628149	66628637	+	0	NA	Intergenic	ORR1A3|LTR|MaLR	-28970	NR_040512	75501	Mm.394300	NR_040512	ENSMUSG00000092599	1700010K23Rik	-	RIKEN cDNA 1700010K23 gene	ncRNA
common_peak1-12593-31-21-0.765807052175826-1.27201509741564	chr18	24101598	24102915	+	0	NA	Intergenic	Intergenic	-10933	NM_027007	69256	Mm.218343	NM_027007	ENSMUSG00000024276	Zfp397	2810411K16Rik|6720480F11Rik|AI461664	zinc finger protein 397	protein-coding
common_peak1-16754-74-48-1.1011767328634-5.02528621353218	chr6	34349413	34351938	+	0	NA	Intergenic	Intergenic	-11687	NM_009731	11997	Mm.482073	NM_009731	ENSMUSG00000052131	Akr1b7	AR|Avdp|MVDP	aldo-keto reductase family 1, member B7	protein-coding
common_peak2-32143-40-44-0.167122586421423-0.413133827688651	chr9	107770302	107771279	+	0	NA	intron (NM_029169, intron 1 of 20)	B1F|SINE|Alu	4360	NM_011251	19654	Mm.139926	NM_011251	ENSMUSG00000032582	Rbm6	4930506F14Rik|Def-3|NY-LU-12|g16|mKIAA4015	RNA binding motif protein 6	protein-coding
common_peak1-9506-20-23--0.0968877161299631-0.305855887145851	chr11	113683356	113684129	+	0	NA	intron (NM_172800, intron 34 of 44)	intron (NM_172800, intron 34 of 44)	-70613	NM_001163346	56699	Mm.293378	NM_020006	ENSMUSG00000041598	Cdc42ep4	1500041M20Rik|Borg4|CEP4	CDC42 effector protein (Rho GTPase binding) 4	protein-coding
common_peak2-25792-46-65--0.146398176109652-0.344471032458745	chr19	36409588	36410442	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-43542	NM_029508	76073	Mm.259180	NM_029508	ENSMUSG00000024805	Pcgf5	0610009F02Rik|1110054A01Rik|5830406C17Rik|5830443C21Rik|9530023M17Rik|AI324127	polycomb group ring finger 5	protein-coding
unique_peak1-2528-10-0-3.35641534500877-3.31132995230379	chr16	20822383	20822717	+	0	NA	Intergenic	Intergenic	-87966	NM_009379	21832	Mm.3943	NM_009379	ENSMUSG00000022847	Thpo	Mgdf|Ml|Mpllg|Tpo	thrombopoietin	protein-coding
unique_peak2-39986-6-13--1.2419568116773-1.58711810488664	chrX	159255754	159256248	+	0	NA	intron (NM_001290776, intron 1 of 10)	intron (NM_001290776, intron 1 of 10)	11385	NM_001290776	353170	Mm.270186	NM_178935	ENSMUSG00000038344	Txlng	4932441K18Rik|Fiat|Lrp	taxilin gamma	protein-coding
unique_peak1-6533-9-1-2.18961340640422-2.31132995230379	chr7	124457378	124457869	+	0	NA	Intergenic	Intergenic	-66870	NM_175645	233781	Mm.461427	NM_175645	ENSMUSG00000030657	Xylt1	8030490L12	xylosyltransferase 1	protein-coding
unique_peak1-2449-10-6-0.549060422951165-1.21398586181642	chr15	102072984	102073561	+	0	NA	intron (NM_011244, intron 3 of 9)	intron (NM_011244, intron 3 of 9)	3659	NM_001042727	19411	Mm.1273	NM_011244	ENSMUSG00000001288	Rarg	Nr1b3|RAR-gamma|RARD|RARgamma2	retinoic acid receptor, gamma	protein-coding
unique_peak2-37466-1-9--2.94898510510411-2.31132995230379	chr5	137707477	137707818	+	0	NA	Intergenic	Intergenic	-21835	NM_009599	11423	Mm.255464	NM_009599	ENSMUSG00000023328	Ache	-	acetylcholinesterase	protein-coding
common_peak1-18420-13-14--0.12841856497075-0.301029995663977	chr8	75089119	75089869	+	0	NA	3' UTR (NM_172396, exon 5 of 5)	3' UTR (NM_172396, exon 5 of 5)	5453	NM_172396	66818	Mm.22565	NM_172396	ENSMUSG00000044600	Smim7	9130011J15Rik	small integral membrane protein 7	protein-coding
common_peak1-8989-67-67-0.456948641532656-1.2225580734244	chr11	59655393	59657302	+	0	NA	Intergenic	Intergenic	-3078	NM_011991	26572	Mm.40	NM_011991	ENSMUSG00000019373	Cops3	Csn3|Sgn3	COP9 (constitutive photomorphogenic) homolog, subunit 3 (Arabidopsis thaliana)	protein-coding
common_peak1-11530-10-9-0.0344872501214071-1.05503135781948	chr16	4405677	4406280	+	0	NA	intron (NM_001291910, intron 3 of 11)	intron (NM_001291910, intron 3 of 11)	14520	NM_001291910	11515	Mm.439750	NM_009624	ENSMUSG00000005580	Adcy9	ACtp10|AW125421|D16Wsu65e|mKIAA0520	adenylate cyclase 9	protein-coding
common_peak2-31104-10-6-0.549060422951165-1.21398586181642	chr8	27259756	27260169	+	0	NA	Intergenic	PB1D9|SINE|Alu	-8679	NM_199042	73754	Mm.383241	NM_199042		Thap1	4833431A01Rik|AW490810	THAP domain containing, apoptosis associated protein 1	protein-coding
common_peak2-27158-36-42-0.0530563314656565-0.323497957212832	chr3	30602381	30603138	+	0	NA	Intergenic	Intergenic	-42456	NM_029489	75953	Mm.308084	NM_029489	ENSMUSG00000051860	Samd7	4930597A01Rik	sterile alpha motif domain containing 7	protein-coding
common_peak2-24612-8-11--0.579740082773585-1.14218153353838	chr17	33781551	33782215	+	0	NA	non-coding (NR_028279, exon 6 of 10)	non-coding (NR_028279, exon 6 of 10)	6843	NR_028279	378460	Mm.272606	NM_001002842	ENSMUSG00000032739	Pram1	AY665714	PML-RAR alpha-regulated adaptor molecule 1	protein-coding
common_peak2-20688-51-75--0.173003687841012-0.398951012888126	chr10	89744711	89746038	+	0	NA	intron (NM_001128086, intron 10 of 24)	Lx9|LINE|L1	-293098	NM_001177397	77531	Mm.440605	NM_181398	ENSMUSG00000058589	Anks1b	AIDA-1b|C030032C09Rik|E530015N03Rik|ENSMUSG00000078431|Gm10937|Gm1555	ankyrin repeat and sterile alpha motif domain containing 1B	protein-coding
unique_peak1-373-11-0-3.50869358425161-3.61235994796777	chr1	144863547	144864055	+	0	NA	Intergenic	MLT2B2|LTR|ERVL	-624026	NM_020025	26878	Mm.285580	NM_020025	ENSMUSG00000033849	B3galt2	-	UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	protein-coding
unique_peak2-32973-4-6--0.830815435910851-0.989110657569874	chr10	54040453	54040702	+	0	NA	Intergenic	L1Md_F2|LINE|L1	244849	NR_038016	100502920	Mm.403982	NR_038016	ENSMUSG00000097069	Gm16998	-	predicted gene, 16998	ncRNA
unique_peak2-36243-9-7-0.18961340640422-1.05908390183068	chr2	39190051	39190463	+	0	NA	Intergenic	L1Md_F3|LINE|L1	-108399	NM_024209	67857	Mm.389242	NM_024209		Ppp6c	2310003C10Rik	protein phosphatase 6, catalytic subunit	protein-coding
common_peak1-14271-16-13-0.310908720210457-0.417187467413082	chr2	156295776	156296518	+	0	NA	intron (NM_001291121, intron 2 of 21)	B2_Mm2|SINE|B2	-5123	NM_001006664	13821	Mm.20852	NM_013510	ENSMUSG00000027624	Epb4.1l1	4.1N|Epb41l1|NBL1|mKIAA0338	erythrocyte protein band 4.1-like 1	protein-coding
common_peak1-19071-12-37--1.59915152835595-2.90875693252979	chr9	70207361	70207971	+	0	NA	intron (NM_181072, intron 18 of 27)	L1MB8|LINE|L1	45894	NR_049200	100885839		NR_049200	miRBase:MI0019195	Mir5626	mmu-mir-5626	microRNA mir-5626	ncRNA
common_peak1-11416-16-15-0.118263642268062-0.328191099940264	chr15	99369725	99370416	+	0	NA	Intergenic	L1ME4a|LINE|L1	-11474	NM_001038658	72393	Mm.39760	NM_028224	ENSMUSG00000023011	Faim2	2900002L20Rik|Lfg|Lfg2|NMP25|Nmp35|Tmbim2	Fas apoptotic inhibitory molecule 2	protein-coding
common_peak2-27035-52-88--0.367473440700699-0.801556296744837	chr2	180041510	180043036	+	0	NA	Intergenic	Intergenic	-17689	NM_173031	271887	Mm.246640	NM_173031	ENSMUSG00000038980	Rbbp8nl	4732416F18	RBBP8 N-terminal like	protein-coding
common_peak1-12942-52-64-0.0858921772372447-0.34185676619046	chr19	24477163	24478426	+	0	NA	intron (NM_008846, intron 3 of 14)	intron (NM_008846, intron 3 of 14)	74170	NM_026520	68034	Mm.440181	NM_026520		Fam122a	2410124L17Rik|2900009I07Rik|ENSMUSG00000051082|Gm9849	family with sequence similarity 122, member A	protein-coding
unique_peak2-33935-2-14--2.82434485187184-3.03832868024006	chr12	73044446	73045425	+	0	NA	intron (NM_026102, intron 5 of 25)	intron (NM_026102, intron 5 of 25)	54405	NM_001286452	208846	Mm.87417	NM_026102	ENSMUSG00000034574	Daam1	-	dishevelled associated activator of morphogenesis 1	protein-coding
unique_peak2-33794-6-5--0.0195643903408542-0.947717972411649	chr11	120235597	120236027	+	0	NA	exon (NM_027980, exon 5 of 10)	exon (NM_027980, exon 5 of 10)	4248	NM_027980	71885	Mm.274890	NM_027980	ENSMUSG00000025384	2310003H01Rik	Faap100	RIKEN cDNA 2310003H01 gene	protein-coding
common_peak2-20848-18-23--0.272043349492805-0.34651636097721	chr11	61619739	61620682	+	0	NA	intron (NM_013881, intron 15 of 26)	B1_Mus1|SINE|Alu	-44620	NM_001164243	212627	Mm.27703	NM_144806	ENSMUSG00000020528	Prpsap2	A230054F23Rik	phosphoribosyl pyrophosphate synthetase-associated protein 2	protein-coding
common_peak1-8455-14-17--0.270708841084668-0.328191099940267	chr10	79916194	79916865	+	0	NA	Intergenic	Intergenic	-20131	NM_001164148	21423	Mm.3406	NM_011548	ENSMUSG00000020167	Tcf3	A1|AA408400|ALF2|AW209082|E12|E12/E47|E2A|E47|ME2|Pan1|Pan2|TCF-3|Tcfe2a|VDIR|bHLHb21	transcription factor 3	protein-coding
common_peak2-26211-11-9-0.186765489364251-0.344532117358383	chr2	26352234	26352667	+	0	NA	intron (NM_008714, intron 2 of 33)	intron (NM_008714, intron 2 of 33)	6892	NM_008714	18128	Mm.290610	NM_008714	ENSMUSG00000026923	Notch1	9930111A19Rik|Mis6|N1|Tan1|lin-12	notch 1	protein-coding
common_peak2-30517-8-8--0.164702583494742-1.00793137938329	chr7	65979131	65979600	+	0	NA	intron (NM_009728, intron 1 of 20)	MTA_Mm|LTR|MaLR	65793	NM_009728	11982	Mm.135129	NM_009728	ENSMUSG00000025324	Atp10a	Atp10c|pfatp	ATPase, class V, type 10A	protein-coding
common_peak2-28213-6-7--0.434601889619698-0.97990265578305	chr4	118062173	118062512	+	0	NA	intron (NM_198170, intron 18 of 71)	intron (NM_198170, intron 18 of 71)	19526	NM_198170	230676	Mm.415218	NM_198170	ENSMUSG00000033253	Szt2	6430407N22|ENSMUSG00000058432|TIGR	seizure threshold 2	protein-coding
unique_peak2-37499-6-17--1.60452689106201-1.49151883326343	chr5	8053001	8053705	+	0	NA	intron (NM_025618, intron 1 of 7)	intron (NM_025618, intron 1 of 7)	-3189	NM_001080974	109552	Mm.96211	NM_025618	ENSMUSG00000003161	Sri	2210417O06Rik|2900070H08Rik|Sor	sorcin	protein-coding
common_peak2-31407-137-161-0.443184696671138-2.29299843324306	chr8	92357933	92360977	+	0	NA	Intergenic	Intergenic	512696	NM_172913	244579	Mm.302755	NM_172913	ENSMUSG00000043668	Tox3	500-9|BC052044|C230068E13|CAGF9|Tnrc9	TOX high mobility group box family member 3	protein-coding
common_peak2-27839-60-83--0.0380255611582294-0.302346047605302	chr3	152121172	152123029	+	0	NA	3' UTR (NM_001080755, exon 14 of 14)	3' UTR (NM_001080755, exon 14 of 14)	62452	NM_001287139	108946	Mm.379292	NM_198416	ENSMUSG00000039068	Zzz3	3110065C23Rik|6430567E01Rik|AA408566|AI481057|AW556059|R75514	zinc finger, ZZ domain containing 3	protein-coding
common_peak1-18022-38-36-0.36199929366958-0.674559023890888	chr7	142060305	142061578	+	0	NA	intron (NM_001033420, intron 25 of 51)	intron (NM_001033420, intron 25 of 51)	69172	NM_001143802	627214	Mm.323610	NM_001143802	ENSMUSG00000073805	Fam196a	B830028B13Rik	family with sequence similarity 196, member A	protein-coding
common_peak2-27464-13-9-0.456543935750406-0.53895475198017	chr3	90596648	90597073	+	0	NA	Intergenic	Lx|LINE|L1	66032	NM_207263	384997	Mm.316644	NM_207263	ENSMUSG00000042250	Pglyrp4	Gm1478|Gm413	peptidoglycan recognition protein 4	protein-coding
unique_peak2-36157-2-6--1.72480917832092-1.26211192963361	chr2	25474927	25475279	+	0	NA	TTS (NM_001040130)	TTS (NM_001040130)	-1905	NM_029859	77058	Mm.478493	NM_029859	ENSMUSG00000026940	Ccdc183	4921530D09Rik|Cccd183|Kiaa1984	coiled-coil domain containing 183	protein-coding
common_peak2-26578-44-79--0.500035260318827-1.07722485289275	chr2	104816008	104817374	+	0	NA	intron (NM_177600, intron 12 of 17)	intron (NM_177600, intron 12 of 17)	40493	NM_145380	98221	Mm.379278	NM_145380	ENSMUSG00000027170	Eif3m	Ga17|Pcid1|Tango7	eukaryotic translation initiation factor 3, subunit M	protein-coding
common_peak1-15733-19-28--0.455293668465885-0.518921928796332	chr4	148038031	148038914	+	0	NA	intron (NM_001085505, intron 5 of 10)	intron (NM_001085505, intron 5 of 10)	21046	NM_001085505	230909	Mm.332067	NM_001085505	ENSMUSG00000070577	Gm572	b2b1167Clo	predicted gene 572	protein-coding
common_peak1-15283-26-19-0.6059709972711-0.841847921495509	chr4	40757088	40757856	+	0	NA	intron (NM_022305, intron 3 of 5)	intron (NM_022305, intron 3 of 5)	39699	NR_039584	100628614		NR_039584		Mir5123	mmu-mir-5123|mu-mir-5123	microRNA 5123	ncRNA
common_peak1-13756-24-43--0.666221715869581-0.994385396256659	chr2	34371774	34372737	+	0	NA	intron (NM_001290625, intron 5 of 11)	intron (NM_001290625, intron 5 of 11)	109884	NM_001290626	227743	Mm.270866	NM_177345	ENSMUSG00000038696	Mapkap1	AI591529|D230039K05Rik|Sin1	mitogen-activated protein kinase associated protein 1	protein-coding
unique_peak1-6495-9-0-3.18961340640422-3.01029995663981	chr7	113438296	113438810	+	0	NA	Intergenic	MTEa|LTR|MaLR	29489	NR_030720	668128	Mm.484022	NR_030720		Gm8989	EG668128|Gm21911	very large inducible GTPase 1 pseudogene	pseudo
unique_peak2-33695-4-5--0.608423014574403-0.909929411522249	chr11	106083743	106084120	+	0	NA	intron (NM_028074, intron 1 of 17)	intron (NM_028074, intron 1 of 17)	5691	NM_028074	72047	Mm.41367	NM_028074	ENSMUSG00000020705	Ddx42	1810047H21Rik|AW319508|AW556242|B430002H05Rik|RHELP|RNAHP|SF3b125	DEAD (Asp-Glu-Ala-Asp) box polypeptide 42	protein-coding
common_peak1-16809-43-66--0.283526004934069-0.518477330661964	chr6	47767583	47768775	+	0	NA	Intergenic	Intergenic	-4668	NM_009787	12304	Mm.2442	NM_009787	ENSMUSG00000025823	Pdia4	AI987846|Cai|ERp-72|Erp72	protein disulfide isomerase associated 4	protein-coding
common_peak2-20348-16-42--1.30800111243404-2.67563291309485	chr10	8549903	8550807	+	0	NA	intron (NM_175155, intron 2 of 19)	intron (NM_175155, intron 2 of 19)	55513	NM_175155	70097	Mm.338275	NM_175155	ENSMUSG00000015305	Sash1	1100001C18Rik|2500002E12Rik|A330076K04Rik|mKIAA0790	SAM and SH3 domain containing 1	protein-coding
unique_peak1-3321-16-2-2.53330114154691-3.78760380288747	chr18	82486097	82486782	+	0	NA	Intergenic	L1_Mur2|LINE|L1	89730	NM_008082	14427	Mm.6219	NM_008082	ENSMUSG00000024553	Galr1	Galnr1	galanin receptor 1	protein-coding
common_peak2-26865-11-10-0.0492619656143161-0.31137425193576	chr2	155826012	155826702	+	0	NA	3' UTR (NM_001145352, exon 5 of 5)	3' UTR (NM_001145352, exon 5 of 5)	3806	NM_001145351	320095	Mm.442175	NM_001145351	ENSMUSG00000074646	6430550D23Rik	-	RIKEN cDNA 6430550D23 gene	protein-coding
unique_peak1-7120-7-2-1.21412832957703-1.45399745587252	chr9	46183161	46183656	+	0	NA	Intergenic	RLTR12A|LTR|ERVK	-55339	NM_183104	74361	Mm.159169	NM_183104	ENSMUSG00000056617	4931429L15Rik	-	RIKEN cDNA 4931429L15 gene	protein-coding
unique_peak1-1254-21-8-1.39956426382392-2.11898024768848	chr11	115964126	115965274	+	0	NA	Intergenic	Intergenic	6849	NM_001205081	217333	Mm.347770	NM_172570	ENSMUSG00000020773	Trim47	2210023F24Rik	tripartite motif-containing 47	protein-coding
unique_peak2-34436-7-9--0.522837264589173-1.05908390183068	chr14	20928463	20928921	+	0	NA	Intergenic	Intergenic	-26298	NM_026209	67509	Mm.292423	NM_026209	ENSMUSG00000045107	Saysd1	1810063B07Rik|4930488P03Rik	SAYSVFN motif domain containing 1	protein-coding
common_peak2-19615-9-6-0.382258484346616-1.11707584880836	chr1	36243676	36244113	+	0	NA	intron (NM_198899, intron 15 of 40)	ORR1B1|LTR|MaLR	-42736	NR_105862	102465540		NR_105862		Mir6897	mmu-mir-6897	microRNA mir-6897	ncRNA
common_peak1-8371-15-20--0.380152672223105-0.397739447719386	chr10	60816136	60816832	+	0	NA	intron (NM_013753, intron 2 of 19)	MLT1J|LTR|MaLR	29787	NM_013753	27355	Mm.269699	NM_013753	ENSMUSG00000020092	Pald1	MMPAL|Pald|mKIAA1274	phosphatase domain containing, paladin 1	protein-coding
common_peak2-21716-38-24-0.927596469523806-2.07189913552604	chr11	109473133	109474076	+	0	NA	promoter-TSS (NM_145940)	promoter-TSS (NM_145940)	-901	NM_145940	52639	Mm.35817	NM_145940	ENSMUSG00000041895	Wipi1	4930533H01Rik|AW411817|D11Ertd498e	WD repeat domain, phosphoinositide interacting 1	protein-coding
common_peak1-12397-79-115--0.029145827950952-0.301978239904549	chr17	70847633	70850513	+	0	NA	intron (NM_027712, intron 1 of 9)	intron (NM_027712, intron 1 of 9)	-22377	NM_001128180	224997	Mm.311840	NM_027712	ENSMUSG00000003279	Dlgap1	4933422O14Rik|9630002F18|AI845682|AI848168|BB075781|D17Bwg0511e|GKAP/SAPAP|GKPA/SAPAP|Gkap|Sapap1|mKIAA4162	discs, large (Drosophila) homolog-associated protein 1	protein-coding
unique_peak2-38073-6-7--0.434601889619698-0.97990265578305	chr6	50387637	50388029	+	0	NA	intron (NM_001163645, intron 1 of 21)	RMER15-int|LTR|ERVL	18336	NM_001163645	71720	Mm.44153	NM_027881	ENSMUSG00000029822	Osbpl3	1200014M06Rik|6720421I08Rik|A530055M08|ORP3|OSBP3	oxysterol binding protein-like 3	protein-coding
common_peak2-30197-36-23-0.894358585446598-1.87476698508571	chr7	45677745	45678839	+	0	NA	Intergenic	Intergenic	841612	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak1-5099-9-7-0.18961340640422-1.05908390183068	chr4	150583629	150584124	+	0	NA	intron (NM_001081557, intron 6 of 23)	L2a|LINE|L2	-151814	NM_009498	22319	Mm.273930	NM_009498	ENSMUSG00000028955	Vamp3	D130027G05Rik|VAMP-3|ceb	vesicle-associated membrane protein 3	protein-coding
unique_peak2-35116-4-8--1.19338551529556-1.21878474469819	chr16	25380831	25381276	+	0	NA	intron (NM_175165, intron 4 of 5)	intron (NM_175165, intron 4 of 5)	94150	NM_175165	71338	Mm.126851	NM_175165	ENSMUSG00000048399	Tprg	5430420C16Rik|Tprg1	transformation related protein 63 regulated	protein-coding
common_peak1-9775-14-22--0.624345795699369-0.590343908676233	chr12	56345156	56345903	+	0	NA	intron (NM_001100110, intron 4 of 15)	MER58A|DNA|MER1_type	14064	NM_001100110	100101806	Mm.471968	NM_001100110	ENSMUSG00000021020	Srp54c	E330029E12Rik	signal recognition particle 54C	protein-coding
unique_peak1-6944-8-3-1.00522241794757-1.39487600375387	chr8	110827770	110828273	+	0	NA	Intergenic	Intergenic	280556	NR_077224	109215	Mm.65282	NR_077224		3010033K07Rik	-	RIKEN cDNA 3010033K07 gene	ncRNA
unique_peak2-33536-7-13--1.00826409175941-0.697979855752659	chr11	77983024	77983747	+	0	NA	intron (NM_080849, intron 8 of 14)	intron (NM_080849, intron 8 of 14)	-4333	NM_009423	22032	Mm.390418	NM_009423		Traf4	A530032M13Rik|CART1|msp2	TNF receptor associated factor 4	protein-coding
common_peak1-19025-9-12--0.510826311736872-0.394412252720706	chr9	63895888	63896478	+	0	NA	Intergenic	Intergenic	-1453	NR_040713	68697	Mm.491042	NR_040713	ENSMUSG00000097036	1110036E04Rik	-	RIKEN cDNA 1110036E04 gene	ncRNA
common_peak1-10492-17-12-0.517856620063946-0.647240723060192	chr14	76414959	76415710	+	0	NA	Intergenic	Intergenic	-4662	NM_026816	68705	Mm.20415	NM_026816	ENSMUSG00000067995	Gtf2f2	1110031C13Rik|AI326315	general transcription factor IIF, polypeptide 2	protein-coding
unique_peak1-7381-57-5-3.68107053935777-16.8073896046069	chrX	75734340	75735215	+	0	NA	intron (NM_027322, intron 2 of 3)	intron (NM_027322, intron 2 of 3)	94367	NM_001164275	546336	Mm.211712	NM_027322	ENSMUSG00000047996	Prrg1	2010007L08Rik	proline rich Gla (G-carboxyglutamic acid) 1	protein-coding
common_peak2-19693-57-80--0.0738169628056955-0.313478684295929	chr1	59762362	59764299	+	0	NA	intron (NM_018868, intron 10 of 14)	intron (NM_018868, intron 10 of 14)	1678	NR_028521	100217421		NR_028521		Snord11	MBII-95	small nucleolar RNA, C/D box 11	snoRNA
unique_peak2-34510-6-20--1.82691931239846-2.0280102512677	chr14	50930367	50930919	+	0	NA	Intergenic	L1Md_F2|LINE|L1	9865	NM_146664	258658	Mm.377621	NM_146664	ENSMUSG00000045306	Olfr734	MOR242-1	olfactory receptor 734	protein-coding
common_peak1-16198-23-21-0.262335885871783-0.416752705545949	chr5	92774044	92775137	+	0	NA	intron (NM_181728, intron 2 of 9)	intron (NM_181728, intron 2 of 9)	3325	NM_021274	15945	Mm.877	NM_021274	ENSMUSG00000034855	Cxcl10	C7|CRG-2|INP10|IP-10|IP10|Ifi10|Scyb10|gIP-10|mob-1	chemokine (C-X-C motif) ligand 10	protein-coding
unique_peak1-6231-15-6-1.20480982849805-1.32521814697968	chr7	5051181	5051939	+	0	NA	Intergenic	Intergenic	16953	NM_001145013	192658	Mm.28764	NM_138954	ENSMUSG00000035191	Rfpl4	D7Ertd486e|Rfpl4a	ret finger protein-like 4	protein-coding
common_peak2-23758-10-7-0.356415345008769-1.12966497611638	chr15	97963711	97964147	+	0	NA	Intergenic	B1_Mur3|SINE|Alu	12204	NM_030121	78541	Mm.200766	NM_030121	ENSMUSG00000048175	Asb8	4930539L19Rik|AI788835|C430011H06Rik	ankyrin repeat and SOCS box-containing 8	protein-coding
common_peak1-11550-31-38--0.0601635480491254-0.30392537800267	chr16	10286455	10287514	+	0	NA	intron (NM_007929, intron 3 of 4)	intron (NM_007929, intron 3 of 4)	27077	NM_007929	13731	Mm.246009	NM_007929	ENSMUSG00000022505	Emp2	XMP	epithelial membrane protein 2	protein-coding
unique_peak2-33855-1-7--2.62705701021674-1.80617997398389	chr12	17324464	17324872	+	0	NA	intron (NM_133699, intron 3 of 13)	intron (NM_133699, intron 3 of 13)	6868	NM_133699	68775	Mm.178798	NM_133699	ENSMUSG00000020566	Atp6v1c2	1110038G14Rik	ATPase, H+ transporting, lysosomal V1 subunit C2	protein-coding
common_peak1-10987-68-92-0.0308019681902651-0.311481380734784	chr15	35155013	35156017	+	0	NA	Intergenic	Intergenic	-69954	NM_019635	56274	Mm.262330	NM_019635	ENSMUSG00000022329	Stk3	0610042I06Rik|MST|Mst2|Mst3|Ste20|mess1	serine/threonine kinase 3	protein-coding
common_peak1-10858-28-16-0.965496278571123-1.60877160026697	chr14	121824700	121826040	+	0	NA	Intergenic	RMER10B|LTR|ERVL	-46918	NM_145465	223255	Mm.390756	NM_145465	ENSMUSG00000063410	Stk24	1810013H02Rik|C76483|MST-3|Mst3|STE20	serine/threonine kinase 24	protein-coding
unique_peak1-3170-16-5-1.53330114154691-1.80287260729378	chr18	38868622	38869404	+	0	NA	Intergenic	Intergenic	-108091	NM_011898	24066	Mm.42038	NM_011898	ENSMUSG00000024427	Spry4	A030006O18Rik|sprouty4	sprouty homolog 4 (Drosophila)	protein-coding
unique_peak2-32478-6-12--1.13504160776079-1.45089835786865	chr1	34236564	34237098	+	0	NA	exon (NM_010081, exon 23 of 24)	exon (NM_010081, exon 23 of 24)	19656	NM_010081	13518	Mm.336625	NM_010081	ENSMUSG00000026131	Dst	2310001O04Rik|A830042E19Rik|AW554249|BP230|BPAG1-n|Bpag|Bpag1|Macf2|ah|athetoid|dt|mKIAA0728|nmf203|nmf339	dystonin	protein-coding
common_peak2-20395-33-54--0.450022150999131-0.755494033265326	chr10	20312426	20313183	+	0	NA	intron (NM_013875, intron 2 of 12)	intron (NM_013875, intron 2 of 12)	132070	NM_013875	29863	Mm.425617	NM_013875	ENSMUSG00000019990	Pde7b	-	phosphodiesterase 7B	protein-coding
unique_peak2-38827-5-9--1.02630843089322-1.21398586181642	chr7	141215848	141216278	+	0	NA	intron (NM_007400, intron 3 of 22)	intron (NM_007400, intron 3 of 22)	200717	NM_007400	11489	Mm.439714	NM_007400	ENSMUSG00000054555	Adam12	Mltna|mKIAA4001	a disintegrin and metallopeptidase domain 12 (meltrin alpha)	protein-coding
common_peak1-16230-54-57-0.315104766502162-0.680633324097779	chr5	100622872	100624068	+	0	NA	Intergenic	Intergenic	-16241	NR_040679	69571	Mm.396412	NR_040679		2310034O05Rik	-	RIKEN cDNA 2310034O05 gene	ncRNA
unique_peak1-4095-13-2-2.19350952991661-3.03832868024006	chr2	72726210	72726876	+	0	NA	Intergenic	Intergenic	-74769	NR_102349	76218	Mm.75260	NR_102348	ENSMUSG00000085427	6430710C18Rik	5033406J01Rik	RIKEN cDNA 6430710C18 gene	ncRNA
unique_peak2-36794-8-4-0.683294323060208-1.21878474469819	chr3	81377168	81377481	+	0	NA	Intergenic	Intergenic	-359214	NM_177662	229445	Mm.254642	NM_177662	ENSMUSG00000028015	Ctso	A330105D01Rik|A430056C07|AI118514	cathepsin O	protein-coding
common_peak1-18077-40-44-0.167122586421423-0.413133827688651	chr8	45579133	45580887	+	0	NA	Intergenic	Intergenic	-455552	NM_001081286	14107	Mm.27365	NM_001081286	ENSMUSG00000070047	Fat1	2310038E12Rik|AU023433|Fath|mFat1	FAT tumor suppressor homolog 1 (Drosophila)	protein-coding
unique_peak1-1240-11-2-1.92373108353046-2.32232533660526	chr11	113294243	113294898	+	0	NA	intron (NM_027216, intron 5 of 9)	intron (NM_027216, intron 5 of 9)	132559	NM_001166503	69806	Mm.341021	NM_027216	ENSMUSG00000041654	Slc39a11	1810074D23Rik	solute carrier family 39 (metal ion transporter), member 11	protein-coding
unique_peak2-36976-6-13--1.2419568116773-1.58711810488664	chr3	116380322	116381022	+	0	NA	intron (NM_144902, intron 6 of 7)	(CAAT)n|Simple_repeat|Simple_repeat	-15077	NM_008246	15247	Mm.280077	NM_008246	ENSMUSG00000089911	Hiat1	-	hippocampus abundant gene transcript 1	protein-coding
unique_peak1-2135-8-0-3.00522241794757-2.70926996097583	chr15	55279714	55280233	+	0	NA	intron (NM_181277, intron 30 of 47)	Lx7|LINE|L1	108894	NM_026759	68537	Mm.236795	NM_026759		Mrpl13	1110002D09Rik	mitochondrial ribosomal protein L13	protein-coding
unique_peak2-34358-3-6--1.22133801201688-1.08602067057793	chr13	102658203	102658700	+	0	NA	Intergenic	ORR1A2|LTR|MaLR	-120279	NM_001077495	18708	Mm.259333	NM_001024955	ENSMUSG00000041417	Pik3r1	PI3K|p50alpha|p55alpha|p85alpha	phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)	protein-coding
common_peak2-30730-9-8-0.0196884049619079-1.03275496310833	chr7	116092724	116093194	+	0	NA	Intergenic	Intergenic	15030	NM_025344	66085	Mm.182962	NM_025344		Eif3f	0610037M02Rik|AA409853|Eif3s5	eukaryotic translation initiation factor 3, subunit F	protein-coding
common_peak2-30990-8-9--0.316705676939792-1.03275496310833	chr8	4493015	4493558	+	0	NA	promoter-TSS (NM_026058)	promoter-TSS (NM_026058)	-119	NM_026058	67260	Mm.35511	NM_026058	ENSMUSG00000008206	Cers4	2900019C14Rik|Lass4|Trh1	ceramide synthase 4	protein-coding
common_peak1-13241-29-16-1.02482723936477-1.87578206828671	chr19	29469966	29471152	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-14850	NM_021396	58205	Mm.116737	NM_021396		Pdcd1lg2	B7-DC|Btdc|F730015O22Rik|PD-L2	programmed cell death 1 ligand 2	protein-coding
unique_peak1-4413-8-1-2.00522241794757-2.05605744720049	chr2	167710022	167710532	+	0	NA	Intergenic	Intergenic	-47550	NM_011201	19246	Mm.277916	NM_011201	ENSMUSG00000027540	Ptpn1	PTP-1B|PTP-HA2|PTP1B	protein tyrosine phosphatase, non-receptor type 1	protein-coding
unique_peak1-4207-9-2-1.60465090568306-1.87199725847353	chr2	119167862	119168416	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	-8839	NM_026929	69065	Mm.35083	NM_026929	ENSMUSG00000027313	Chac1	1810008K03Rik	ChaC, cation transport regulator 1	protein-coding
common_peak2-26434-57-109--0.515326673445731-1.50247567844108	chr2	65237854	65239772	+	0	NA	Intergenic	RMER1B|Other|Other	-36356	NR_105755	102466151		NR_105755	miRBase:MI0021865	Mir6337	mmu-mir-6337	microRNA mir-6337	ncRNA
common_peak1-19231-10-13--0.450939577048835-0.386243247519795	chr9	108262910	108263477	+	0	NA	intron (NM_011678, intron 4 of 21)	B4A|SINE|B4	13031	NM_011678	22258	Mm.3974	NM_011678	ENSMUSG00000032612	Usp4	F730026I20Rik|Unp|mKIAA4155	ubiquitin specific peptidase 4 (proto-oncogene)	protein-coding
common_peak2-27368-24-26-0.0383224006042484-0.317118655902073	chr3	84813535	84814438	+	0	NA	Intergenic	Intergenic	-44484	NM_001040461	654362	Mm.466598	NM_001040461		Dear1	Dear|Despr	dual endothelin 1/angiotensin II receptor 1	protein-coding
common_peak1-18326-47-89--0.557011671563127-1.44267101396302	chr8	57651534	57652916	+	0	NA	Intergenic	Intergenic	733536	NM_175939	244486	Mm.67684	NM_175939	ENSMUSG00000046258	Adam29	-	a disintegrin and metallopeptidase domain 29	protein-coding
common_peak1-15556-35-32-0.386976139104051-0.652627812244279	chr4	123802924	123804252	+	0	NA	Intergenic	Intergenic	208912	NM_017475	54170	Mm.220922	NM_017475	ENSMUSG00000028646	Rragc	AU041672|Gtr2|RAGC|TIB929|YGR163W	Ras-related GTP binding C	protein-coding
unique_peak1-3183-10-2-1.77145284428761-2.09384600808989	chr18	46380848	46381274	+	0	NA	Intergenic	Intergenic	-8800	NM_178872	28105	Mm.277382	NM_178872	ENSMUSG00000033949	Trim36	D18Wsu100e|haprin	tripartite motif-containing 36	protein-coding
common_peak2-26764-24-42--0.633054851934381-0.913161965438649	chr2	140763076	140763990	+	0	NA	intron (NM_001013802, intron 4 of 18)	intron (NM_001013802, intron 4 of 18)	-266321	NM_178382	71436	Mm.426781	NM_178382	ENSMUSG00000051379	Flrt3	5530600M07Rik|C430047I10Rik|mKIAA1469	fibronectin leucine rich transmembrane protein 3	protein-coding
common_peak1-9722-32-66--0.786997171238112-1.82572255783529	chr12	32378650	32379638	+	0	NA	intron (NM_001163126, intron 6 of 22)	intron (NM_001163126, intron 6 of 22)	19647	NM_175191	73010	Mm.441517	NM_175191	ENSMUSG00000044067	Gpr22	2900068K05Rik|AW061316	G protein-coupled receptor 22	protein-coding
unique_peak1-4311-11-1-2.50869358425161-2.83420869758413	chr2	148855222	148855738	+	0	NA	Intergenic	Intergenic	-154276	NM_009976	13010	Mm.4263	NM_009976	ENSMUSG00000027447	Cst3	CysC	cystatin C	protein-coding
common_peak1-7635-19-13-0.595332404604082-0.713635438203849	chr1	64808512	64809355	+	0	NA	Intergenic	Intergenic	-24609	NM_022721	14367	Mm.150813	NM_022721	ENSMUSG00000045005	Fzd5	5330434N09Rik|AI427138|Fz-5|Fz5|mFz5	frizzled homolog 5 (Drosophila)	protein-coding
common_peak1-15787-13-7-0.778472030637769-0.817533494790411	chr4	155492121	155492640	+	0	NA	intron (NM_177205, intron 3 of 9)	B1_Mur1|SINE|Alu	8273	NM_177205	230996	Mm.318925	NM_145557	ENSMUSG00000059939	9430015G10Rik	-	RIKEN cDNA 9430015G10 gene	protein-coding
common_peak1-15273-77-106-0.043059593154851-0.317115895953177	chr4	33247739	33248788	+	0	NA	intron (NM_008075, intron 8 of 9)	intron (NM_008075, intron 8 of 9)	28449	NM_001034867	242377	Mm.372465	NM_001034867		Pm20d2	Acy1l2|Gm424	peptidase M20 domain containing 2	protein-coding
common_peak2-23631-12-14--0.25811461052088-0.309074325783021	chr15	83411442	83411975	+	0	NA	intron (NM_183017, intron 9 of 13)	B4|SINE|B4	13879	NM_183017	223723	Mm.46778	NM_183017	ENSMUSG00000016757	Ttll12	BC055368|D430005B17	tubulin tyrosine ligase-like family, member 12	protein-coding
common_peak1-14524-29-31-0.112290080615111-0.353704024845522	chr3	27886172	27887626	+	0	NA	intron (NM_008875, intron 1 of 25)	intron (NM_008875, intron 1 of 25)	3806	NM_008875	18805	Mm.212039	NM_008875	ENSMUSG00000027695	Pld1	AA536939|C85393|Pld1a|Pld1b	phospholipase D1	protein-coding
common_peak1-7969-25-26-0.106962403181638-0.336580821310522	chr1	156616941	156617953	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-44397	NM_009782	12290	Mm.267517	NM_009782	ENSMUSG00000004110	Cacna1e	A430040I15|BII|Cach6|Cacnl1a6|Cav2.3|Cchra1|alpha1E	calcium channel, voltage-dependent, R type, alpha 1E subunit	protein-coding
unique_peak2-38321-3-7--1.41398308995928-1.23214870625617	chr6	146755221	146755697	+	0	NA	intron (NM_001289681, intron 2 of 14)	B3A|SINE|B2	1407	NM_001289681	272322	Mm.333500	NM_172309	ENSMUSG00000040187	Arntl2	4632430A05Rik|BMAL2|CLIF|MOP9|bHLHe6	aryl hydrocarbon receptor nuclear translocator-like 2	protein-coding
unique_peak2-35063-3-7--1.41398308995928-1.23214870625617	chr16	13241001	13241370	+	0	NA	Intergenic	ID_B1|SINE|B4	-15389	NM_001122667	239719	Mm.270643	NM_153588	ENSMUSG00000009569	Mkl2	ENSMUSG00000075401|Gt4-1|MRTF-B|Mrtfb|mKIAA1243	MKL/myocardin-like 2	protein-coding
common_peak1-17181-32-44--0.212761077110015-0.36647540798597	chr6	122810858	122812047	+	0	NA	Intergenic	Lx8|LINE|L1	-5277	NM_009779	12267	Mm.2408	NM_009779	ENSMUSG00000040552	C3ar1	AZ3B|C3AR|HNFAG09	complement component 3a receptor 1	protein-coding
unique_peak2-32470-3-7--1.41398308995928-1.23214870625617	chr1	25016204	25016679	+	0	NA	Intergenic	Intergenic	318358	NM_001204913	100504323	Mm.484176	NM_001204913		Gm20172	-	predicted gene, 20172	protein-coding
common_peak2-29543-26-15-0.927899092158462-1.40782320807777	chr6	39377230	39377656	+	0	NA	Intergenic	B2_Mm1a|SINE|B2	-7075	NM_018810	54484	Mm.270484	NM_018810	ENSMUSG00000029922	Mkrn1	RFP	makorin, ring finger protein, 1	protein-coding
unique_peak2-37323-6-8--0.60452689106201-1.03789460276074	chr4	127371726	127372172	+	0	NA	Intergenic	Intergenic	276136	NM_001134733	635169	Mm.346755	NM_001134733	ENSMUSG00000028813	CK137956	-	cDNA sequence CK137956	protein-coding
common_peak2-30263-26-38--0.357503126703786-0.505877949819268	chr7	15945509	15946620	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-28136	NM_145708	246792	Mm.26391	NM_145708	ENSMUSG00000074369	Obox2	-	oocyte specific homeobox 2	protein-coding
common_peak1-12033-8-22--1.51833953810944-1.77631109801764	chr17	17623784	17624319	+	0	NA	Intergenic	Intergenic	84401	NM_025681	66643	Mm.268018	NM_025681	ENSMUSG00000047786	Lix1	5730466L18Rik	limb expression 1 homolog (chicken)	protein-coding
unique_peak2-35248-8-11--0.579740082773585-1.14218153353838	chr16	97761427	97761913	+	0	NA	intron (NR_003508, intron 2 of 13)	intron (NR_003508, intron 2 of 13)	3980	NM_013606	17858	Mm.14157	NM_013606	ENSMUSG00000023341	Mx2	AI528743|Mx-2	MX dynamin-like GTPase 2	protein-coding
common_peak1-9082-9-17--0.980311595038092-0.844317084070804	chr11	69681506	69682049	+	0	NA	Intergenic	RMER10B|LTR|ERVL	-9545	NM_031880	83813	Mm.28874	NM_031880	ENSMUSG00000001583	Tnk1	Kos1|Tnk1a|Tnk1b	tyrosine kinase, non-receptor, 1	protein-coding
unique_peak1-6720-9-1-2.18961340640422-2.31132995230379	chr8	41019181	41019642	+	0	NA	Intergenic	RMER19B|LTR|ERVK	-291379	NM_001113326	20288	Mm.239291	NM_031195	ENSMUSG00000025044	Msr1	MRS-A|MSR|MSR-A|SR-AI|SR-AII|Scara1|Scvr	macrophage scavenger receptor 1	protein-coding
unique_peak1-3307-12-0-3.64877598508764-4.21441993929574	chr18	78132181	78132724	+	0	NA	Intergenic	ORR1A2|LTR|MaLR	-2754	NM_001195633	100502841	Mm.297782	NM_001195633	ENSMUSG00000039840	Epg5	4732475F16|5430411K18Rik|AI661957|AW456499|mKIAA1632	ectopic P-granules autophagy protein 5 homolog (C. elegans)	protein-coding
common_peak2-21688-16-17--0.0516613591742505-0.301029995663984	chr11	104607953	104608822	+	0	NA	Intergenic	B3A|SINE|B2	139073	NM_016780	16416	Mm.87150	NM_016780	ENSMUSG00000020689	Itgb3	CD61|GP3A|INGRB3	integrin beta 3	protein-coding
common_peak1-17233-13-18--0.469455482805817-0.409888142029227	chr6	128142997	128143614	+	0	NA	Intergenic	PB1D10|SINE|Alu	-9484	NR_077223	330427	Mm.426356	NR_077223		9330102E08Rik	-	RIKEN cDNA 9330102E08 gene	ncRNA
unique_peak2-37493-1-6--2.43441193227435-1.56314192529759	chr5	5686785	5687214	+	0	NA	intron (NM_028734, intron 1 of 5)	intron (NM_028734, intron 1 of 5)	7090	NM_001285471	74051	Mm.274956	NM_028734	ENSMUSG00000015653	Steap2	4921538B17Rik|AI930049|AW045895|IPCA-1|IPCA1|PCANAP1|STAMP1|STMP	six transmembrane epithelial antigen of prostate 2	protein-coding
common_peak2-24563-37-66--0.540096118971953-1.0807309740853	chr17	29007043	29008956	+	0	NA	intron (NM_001034885, intron 1 of 9)	ID_B1|SINE|B4	12643	NM_001034885	433091	Mm.328925	NM_001034885	ENSMUSG00000043286	Pnpla1	-	patatin-like phospholipase domain containing 1	protein-coding
common_peak1-17938-25-32--0.182544214013348-0.333081040816759	chr7	127392699	127393764	+	0	NA	intron (NM_026458, intron 15 of 30)	intron (NM_026458, intron 15 of 30)	45753	NM_026458	67928	Mm.158178	NM_026458	ENSMUSG00000062017	Abca14	1700110B15Rik|4930539G24Rik	ATP-binding cassette, sub-family A (ABC1), member 14	protein-coding
common_peak1-10088-9-11--0.395349094316936-0.344532117358383	chr13	23749919	23750439	+	0	NA	Intergenic	Intergenic	25649	NM_178189	319164	Mm.261973	NM_178189	ENSMUSG00000069270	Hist1h2ac	-	histone cluster 1, H2ac	protein-coding
common_peak2-21056-16-17--0.0516613591742505-0.301029995663984	chr11	44518754	44519643	+	0	NA	intron (NM_001290710, intron 6 of 14)	intron (NM_001290710, intron 6 of 14)	87596	NM_001290710	13591	Mm.439662	NM_007897		Ebf1	Ebf|O/E-1|OE-1|Olf-1|Olf1	early B cell factor 1	protein-coding
common_peak1-11059-44-44-0.33003973823886-0.665385344403438	chr15	55556707	55558078	+	0	NA	intron (NM_016667, intron 3 of 6)	intron (NM_016667, intron 3 of 6)	168429	NM_001168250	105837	Mm.390829	NM_134092	ENSMUSG00000022369	Mtbp	AI429604|MDM2BP	Mdm2, transformed 3T3 cell double minute p53 binding protein	protein-coding
common_peak2-20918-11-9-0.186765489364251-0.344532117358383	chr11	5837432	5837867	+	0	NA	intron (NM_010292, intron 1 of 9)	RLTR10-int|LTR|ERVK	12435	NM_010292	103988	Mm.220358	NM_010292	ENSMUSG00000041798	Gck	GLK|Gk|Gls006|HK4|HKIV|HXKP|MODY2	glucokinase	protein-coding
unique_peak2-33818-4-6--0.830815435910851-0.989110657569874	chr12	3711348	3711774	+	0	NA	intron (NR_027869, intron 9 of 20)	intron (NR_027869, intron 9 of 20)	-95419	NM_007872	13435	Mm.5001	NM_007872	ENSMUSG00000020661	Dnmt3a	MmuIIIA	DNA methyltransferase 3A	protein-coding
unique_peak1-3650-13-3-1.77847203063777-2.58603100924543	chr19	38614719	38615450	+	0	NA	intron (NM_019588, intron 1 of 31)	intron (NM_019588, intron 1 of 31)	16397	NM_019588	74055	Mm.34031	NM_019588	ENSMUSG00000024998	Plce1	4933403A21Rik|PLCepsilon|Plce|mKIAA1516	phospholipase C, epsilon 1	protein-coding
common_peak2-29595-16-11-0.533301141546906-0.58239619684445	chr6	50596324	50596832	+	0	NA	Intergenic	Intergenic	7814	NM_021892	60531	Mm.157158	NM_021892		Npvf	Rfrp	neuropeptide VF precursor	protein-coding
common_peak2-20089-12-23--0.936186515633517-0.912223620338476	chr1	156473757	156474576	+	0	NA	intron (NM_009782, intron 6 of 46)	L2a|LINE|L2	98884	NM_009782	12290	Mm.267517	NM_009782	ENSMUSG00000004110	Cacna1e	A430040I15|BII|Cach6|Cacnl1a6|Cav2.3|Cchra1|alpha1E	calcium channel, voltage-dependent, R type, alpha 1E subunit	protein-coding
common_peak1-19218-8-9--0.316705676939792-1.03275496310833	chr9	106360649	106361057	+	0	NA	intron (NM_021567, intron 1 of 12)	intron (NM_021567, intron 1 of 12)	4684	NM_021567	59092	Mm.286394	NM_021567	ENSMUSG00000023495	Pcbp4	1200003L19Rik|AlphaCP-4	poly(rC) binding protein 4	protein-coding
common_peak1-11301-10-11--0.228547155712387-0.31137425193576	chr15	83564992	83565539	+	0	NA	Intergenic	Intergenic	-9796	NM_022723	64706	Mm.40393	NM_022723	ENSMUSG00000016763	Scube1	7330410C13Rik|A630023E24Rik	signal peptide, CUB domain, EGF-like 1	protein-coding
common_peak1-8493-37-85--0.900271683216279-2.86088863980773	chr10	80961270	80962502	+	0	NA	exon (NM_010102, exon 1 of 1)	exon (NM_010102, exon 1 of 1)	996	NM_010102	13611	Mm.33065	NM_010102	ENSMUSG00000044199	S1pr4	Edg6|Lpc1|S1p4	sphingosine-1-phosphate receptor 4	protein-coding
common_peak1-8804-8-12--0.695217300193522-0.475924844171029	chr11	20542207	20542631	+	0	NA	intron (NM_001038625, intron 1 of 1)	intron (NM_001038625, intron 1 of 1)	10439	NM_001038625	58172	Mm.339676	NM_021372	ENSMUSG00000049800	Sertad2	AB041541|AU021878|Kiaa0127|SEI-2|Sei2|TRIP-Br2|mKIAA0127	SERTA domain containing 2	protein-coding
common_peak2-32349-22-39--0.674643989799958-0.97145127402441	chrX	85573936	85574641	+	0	NA	Intergenic	Lx6|LINE|L1	-213326	NM_001160403	331461	Mm.121680	NM_001160403		Il1rapl1	6330532G10Rik|C030039N24|IL1R8|IL1RAPL|MRX34|OPHN4|TIGIRR-2	interleukin 1 receptor accessory protein-like 1	protein-coding
unique_peak1-1337-7-5-0.214128329577033-1.01466476204226	chr12	9030906	9031392	+	0	NA	intron (NM_001159527, intron 24 of 26)	intron (NM_001159527, intron 24 of 26)	-5654	NM_029321	75516	Mm.37581	NM_029321	ENSMUSG00000066637	Ttc32	1700013G20Rik	tetratricopeptide repeat domain 32	protein-coding
common_peak2-23697-8-6-0.197867495889966-1.03789460276074	chr15	88853102	88853510	+	0	NA	intron (NM_031260, intron 19 of 26)	intron (NM_031260, intron 19 of 26)	-36850	NM_001002005	406218	Mm.483059	NM_001002005	ENSMUSG00000058441	Panx2	-	pannexin 2	protein-coding
common_peak1-9510-16-8-0.948338640825749-1.02063122982878	chr11	114933819	114934493	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-10804	NM_172050	217306	Mm.222667	NM_172050	ENSMUSG00000048498	Cd300e	BC034097|CLM2|Cd300le|TREM5	CD300e antigen	protein-coding
unique_peak1-6685-12-1-2.64877598508764-3.36932189928148	chr8	26784358	26784845	+	0	NA	intron (NM_001001735, intron 8 of 9)	intron (NM_001001735, intron 8 of 9)	33845	NM_001081269	234135	Mm.217337	NM_001001735	ENSMUSG00000054823	Whsc1l1	6720429E03|A530023P05|AI528490|NSD3|WHISTLE	Wolf-Hirschhorn syndrome candidate 1-like 1 (human)	protein-coding
unique_peak1-60-11-2-1.92373108353046-2.32232533660526	chr1	34103375	34103945	+	0	NA	intron (NM_134448, intron 1 of 97)	intron (NM_134448, intron 1 of 97)	34990	NM_134448	13518	Mm.336625	NM_010081	ENSMUSG00000026131	Dst	2310001O04Rik|A830042E19Rik|AW554249|BP230|BPAG1-n|Bpag|Bpag1|Macf2|ah|athetoid|dt|mKIAA0728|nmf203|nmf339	dystonin	protein-coding
common_peak2-32226-12-19--0.673152109799724-0.546772548767014	chr9	123112849	123113302	+	0	NA	intron (NM_133974, intron 1 of 8)	intron (NM_133974, intron 1 of 8)	12081	NM_133974	109332	Mm.27519	NM_133974	ENSMUSG00000035498	Cdcp1	9030022E12Rik|AA409659|E030027H19Rik	CUB domain containing protein 1	protein-coding
common_peak2-20127-19-35--0.767237674780626-1.06916698217164	chr1	165459858	165461052	+	0	NA	Intergenic	Intergenic	-126683	NM_178883	98376	Mm.32901	NM_178883	ENSMUSG00000040124	Gorab	AI467484|NTKL-BP1|Scyl1bp1	golgin, RAB6-interacting	protein-coding
common_peak1-14611-45-33-0.772895184094533-1.81177654248742	chr3	52069595	52070822	+	0	NA	Intergenic	Intergenic	-2051	NM_019739	56458	Mm.29891	NM_019739	ENSMUSG00000044167	Foxo1	AI876417|Afxh|FKHR|Fkhr1|Foxo1a	forkhead box O1	protein-coding
common_peak2-32206-25-26-0.106962403181638-0.336580821310522	chr9	120739314	120740388	+	0	NA	Intergenic	Intergenic	84517	NR_040742	76402	Mm.436588	NR_040742		1700020M21Rik	-	RIKEN cDNA 1700020M21 gene	ncRNA
common_peak1-16244-21-20-0.177171842487475-0.380101753845079	chr5	104046159	104046886	+	0	NA	intron (NM_029415, intron 3 of 5)	intron (NM_029415, intron 3 of 5)	11900	NM_029415	75750	Mm.7446	NM_029415	ENSMUSG00000029321	Slc10a6	8430417G17Rik|C78479|Soat	solute carrier family 10 (sodium/bile acid cotransporter family), member 6	protein-coding
common_peak2-25800-16-28--0.73971735285951-0.890873221665474	chr19	37434105	37434899	+	0	NA	Intergenic	Intergenic	-16391	NM_010615	16551	Mm.42203	NM_010615	ENSMUSG00000012443	Kif11	Eg5|Kif8|Kifl1|Knsl1	kinesin family member 11	protein-coding
common_peak2-23275-31-45--0.29832328524389-0.470780655014941	chr15	27465867	27467465	+	0	NA	intron (NM_020332, intron 1 of 11)	intron (NM_020332, intron 1 of 11)	-34583	NR_106065	102466808		NR_106065		Mir7117	mmu-mir-7117	microRNA mir-7117	ncRNA
common_peak1-16255-43-52-0.054642730960504-0.319297110585539	chr5	105699577	105700765	+	0	NA	3' UTR (NM_194336, exon 11 of 11)	3' UTR (NM_194336, exon 11 of 11)	22547	NM_194336	100702	Mm.491210	NM_194336	ENSMUSG00000079362	Gbp6	AI595338|Mpa2l	guanylate binding protein 6	protein-coding
common_peak2-31473-6-9--0.75652998450706-1.11707584880836	chr8	106135610	106136042	+	0	NA	intron (NR_045730, intron 1 of 4)	RLTR20A1|LTR|ERVK	8127	NR_045730	71058	Mm.67707	NR_045730		4933400L20Rik	-	RIKEN cDNA 4933400L20 gene	ncRNA
common_peak1-18536-60-67-0.266829020370192-0.629493032588487	chr8	94677667	94680089	+	0	NA	Intergenic	Intergenic	201141	NR_110452	71296	Mm.86664	NR_033641	ENSMUSG00000031736	Crnde	4933436C20Rik	colorectal neoplasia differentially expressed (non-protein coding)	ncRNA
common_peak1-12684-63-64-0.415944778042135-1.06473361244512	chr18	38631071	38632881	+	0	NA	Intergenic	Intergenic	53347	NM_022996	65113	Mm.102496	NM_022996	ENSMUSG00000024425	Ndfip1	0610010M22Rik|N4wbp5	Nedd4 family interacting protein 1	protein-coding
unique_peak1-6781-10-3-1.35641534500877-1.75805390616669	chr8	64728308	64728844	+	0	NA	Intergenic	L1Md_T|LINE|L1	-126586	NM_011922	26359	Mm.42179	NM_011922	ENSMUSG00000031635	Anxa10	-	annexin A10	protein-coding
common_peak2-31067-4-7--1.02346051385325-1.09384600808989	chr8	22492701	22493146	+	0	NA	Intergenic	L1VL1|LINE|L1	-26224	NM_007844	13218	Mm.304264	NM_007844	ENSMUSG00000074437	Defa-rs1	2010300L12Rik|2010319H24Rik|CRS1C|CRS1C-2|CRS1C-5|Defcr-rs1	defensin, alpha, related sequence 1	protein-coding
unique_peak2-35152-3-7--1.41398308995928-1.23214870625617	chr16	32805399	32805766	+	0	NA	intron (NM_001256309, intron 3 of 3)	intron (NM_001256309, intron 3 of 3)	4950	NM_001256309	381043	Mm.303864	NM_001256309		Gm933	Gm1743	predicted gene 933	protein-coding
unique_peak2-38484-13-34--1.3508109863072-2.16696607243888	chr7	30972934	30974047	+	0	NA	intron (NM_009795, intron 9 of 10)	intron (NM_009795, intron 9 of 10)	4300	NM_009944	12865	Mm.423030	NM_009944	ENSMUSG00000074218	Cox7a1	COX7A|COX7AH|COX7AM	cytochrome c oxidase subunit VIIa 1	protein-coding
common_peak2-21704-8-5-0.420259917226415-1.10484139239135	chr11	106812871	106813299	+	0	NA	Intergenic	Intergenic	-31056	NM_025481	66313	Mm.340955	NM_025481	ENSMUSG00000018363	Smurf2	2810411E22Rik|AI558114|AI649275	SMAD specific E3 ubiquitin protein ligase 2	protein-coding
unique_peak1-4196-10-2-1.77145284428761-2.09384600808989	chr2	117928918	117929435	+	0	NA	Intergenic	Intergenic	-8482	NM_011580	21825	Mm.4159	NM_011580	ENSMUSG00000040152	Thbs1	TSP-1|TSP1|Thbs-1|tbsp1	thrombospondin 1	protein-coding
unique_peak1-706-15-5-1.4272022498345-1.61682445937017	chr10	84397500	84398199	+	0	NA	intron (NM_001013441, intron 2 of 8)	L1MB7|LINE|L1	17491	NM_183172	237422	Mm.18936	NM_183172		Ric8b	BC051080|Ric-8|Ric-8b	resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)	protein-coding
common_peak2-28878-15-30--0.942031559831219-1.24110690293937	chr5	81020191	81021106	+	0	NA	Intergenic	(TA)n|Simple_repeat|Simple_repeat	-429970	NM_198702	319387	Mm.273631	NM_198702	ENSMUSG00000037605	Lphn3	5430402I23Rik|CIRL-3|D130075K09Rik|Gm1379|LEC3|mKIAA0768	latrophilin 3	protein-coding
common_peak1-19430-45-52-0.132437570781673-0.372131646957063	chrX	77794963	77796063	+	0	NA	Intergenic	RodERV21-int|LTR|ERV1	-520470	NM_138751	192216	Mm.490421	NM_138751	ENSMUSG00000025666	Tmem47	3010015F07Rik|AI115536|BCMP1|Tm4sf10	transmembrane protein 47	protein-coding
unique_peak2-35407-6-27--2.2419568116773-3.43978897119959	chr17	33089232	33089900	+	0	NA	intron (NR_033585, intron 2 of 2)	intron (NR_033585, intron 2 of 2)	-5260	NM_130882	170716	Mm.254838	NM_130882	ENSMUSG00000024055	Cyp4f13	0610030I10Rik|Cypf13	cytochrome P450, family 4, subfamily f, polypeptide 13	protein-coding
unique_peak1-4695-9-6-0.382258484346616-1.11707584880836	chr3	97609756	97610246	+	0	NA	intron (NM_001289702, intron 4 of 45)	L1ME1|LINE|L1	-38064	NM_178080	83679	Mm.129840	NM_031401	ENSMUSG00000038170	Pde4dip	4732458A06Rik|9430063L05Rik|C87016|D130016K21Rik|D3Bwg1078e|Usmg4|mKIAA0454	phosphodiesterase 4D interacting protein (myomegalin)	protein-coding
common_peak2-23139-41-41-0.3088312820699-0.584217371416963	chr14	104521889	104523001	+	0	NA	Intergenic	L1Md_T|LINE|L1	-96086	NR_045953	73877	Mm.399172	NR_045953		4930432J09Rik	-	RIKEN cDNA 4930432J09 gene	ncRNA
common_peak2-24603-17-14-0.311405742596519-0.466170754204149	chr17	32829898	32830389	+	0	NA	intron (NM_134127, intron 5 of 12)	intron (NM_134127, intron 5 of 12)	7539	NM_134127	106648	Mm.26539	NM_134127	ENSMUSG00000073424	Cyp4f15	AI787289|Cyp4f-15	cytochrome P450, family 4, subfamily f, polypeptide 15	protein-coding
common_peak2-27186-11-15--0.491306415748387-0.435191258261915	chr3	36481810	36482308	+	0	NA	intron (NM_027810, intron 13 of 18)	B2_Mm1t|SINE|B2	-11141	NM_009828	12428	Mm.4189	NM_009828	ENSMUSG00000027715	Ccna2	AA408589|Ccn-1|Ccn1|Ccna|CycA2|Cyca	cyclin A2	protein-coding
common_peak2-30440-10-12--0.344024373132323-0.340565874754526	chr7	44985884	44986455	+	0	NA	Intergenic	Intergenic	1533735	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak1-16615-14-16--0.188246680892695-0.308035960714963	chr6	135266164	135266790	+	0	NA	Intergenic	Intergenic	-6075	NM_029595	76400	Mm.293018	NM_029595		Pbp2	1700023A18Rik|AI326308|Pebp-2|Pebp2	phosphatidylethanolamine binding protein 2	protein-coding
common_peak2-28866-55-85--0.221644883549396-0.466412485092343	chr5	76140104	76141294	+	0	NA	Intergenic	Intergenic	169683	NM_021099	16590	Mm.247073	NM_021099	ENSMUSG00000005672	Kit	Bs|CD117|Fdc|Gsfsco1|Gsfsco5|Gsfsow3|SCO1|SCO5|SOW3|Ssm|Tr-kit|W|c-KIT	kit oncogene	protein-coding
common_peak2-22332-40-51--0.0414640353899935-0.301029995663982	chr13	23554435	23555948	+	0	NA	intron (NM_013483, intron 3 of 7)	(TA)n|Simple_repeat|Simple_repeat	2579	NM_013483	12231	Mm.1420	NM_013483	ENSMUSG00000000706	Btn1a1	Btn	butyrophilin, subfamily 1, member A1	protein-coding
common_peak2-26728-26-47--0.657063408562694-1.12279078807801	chr2	131262486	131263343	+	0	NA	Intergenic	MLT1B|LTR|MaLR	-54684	NM_001177834	228608	Mm.136586	NM_145533	ENSMUSG00000027333	Smox	B130066H01Rik|PAO|PAOh1|SMO	spermine oxidase	protein-coding
unique_peak1-4371-30-4-2.84774731460451-6.69496016203892	chr2	157412457	157413748	+	0	NA	Intergenic	MMETn-int|LTR|ERVK	-21005	NM_016916	53619	Mm.480461	NM_016916	ENSMUSG00000067787	Blcap	AI462828|Bc10	bladder cancer associated protein homolog (human)	protein-coding
common_peak1-17712-18-14-0.406028555619833-0.532159081577619	chr7	79300104	79300947	+	0	NA	intron (NM_001024703, intron 17 of 22)	(TA)n|Simple_repeat|Simple_repeat	150956	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding
unique_peak2-35094-5-13--1.51173525806346-1.78669045979184	chr16	20498660	20499245	+	0	NA	promoter-TSS (NM_172265)	promoter-TSS (NM_172265)	62	NM_172265	224045	Mm.233855	NM_172265	ENSMUSG00000003235	Eif2b5	C81315	eukaryotic translation initiation factor 2B, subunit 5 epsilon	protein-coding
common_peak2-31241-27-39--0.330382143992127-0.451135909022758	chr8	70476246	70477076	+	0	NA	intron (NM_177698, intron 3 of 14)	ORR1A4|LTR|MaLR	21812	NM_177698	234353	Mm.32525	NM_027626	ENSMUSG00000030465	Psd3	4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D	pleckstrin and Sec7 domain containing 3	protein-coding
common_peak2-28575-11-10-0.0492619656143161-0.31137425193576	chr5	8848702	8849209	+	0	NA	intron (NM_011075, intron 22 of 27)	intron (NM_011075, intron 22 of 27)	-44766	NM_008830	18670	Mm.297825	NM_008830	ENSMUSG00000042476	Abcb4	Mdr2|Pgy-2|Pgy2|mdr-2	ATP-binding cassette, sub-family B (MDR/TAP), member 4	protein-coding
common_peak1-9624-80-94-0.280720158038404-0.759995171262795	chr11	121696688	121699340	+	0	NA	intron (NM_029049, intron 3 of 3)	intron (NM_029049, intron 3 of 3)	6482	NM_029049	74675	Mm.61213	NM_029049	ENSMUSG00000039198	Ptchd3	4930451E13Rik|4933440L20Rik|RNDEu-3	patched domain containing 3	protein-coding
common_peak2-22525-35-73--0.778083107166446-2.00509512107875	chr13	55189257	55190385	+	0	NA	intron (NM_001293660, intron 2 of 12)	intron (NM_001293660, intron 2 of 12)	11835	NM_011307	20184	Mm.259301	NM_011307	ENSMUSG00000025878	Uimc1	9430016E08Rik|D330018D10Rik|D630032M02Rik|RIP110|Rxrip110	ubiquitin interaction motif containing 1	protein-coding
common_peak1-18849-28-30-0.0987628094345876-0.332062764479303	chr9	20492017	20493103	+	0	NA	intron (NM_173777, intron 1 of 5)	MTE2b|LTR|MaLR	35986	NM_023371	23988	Mm.7906	NM_023371	ENSMUSG00000032171	Pin1	0610025L01Rik|D9Bwg1161e	protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1	protein-coding
common_peak2-31669-19-14-0.495796731053168-0.607095980551316	chr8	126805686	126806444	+	0	NA	intron (NM_139272, intron 1 of 15)	intron (NM_139272, intron 1 of 15)	50771	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
common_peak1-13564-73-93-0.137806154747584-0.411867520083741	chr2	6321861	6323616	+	0	NA	intron (NM_181399, intron 4 of 13)	AT_rich|Low_complexity|Low_complexity	48956	NM_181399	98910	Mm.40673	NM_181399	ENSMUSG00000039046	Usp6nl	AI316785|RNTRE|TRE2NL|mKIAA0019	USP6 N-terminal like	protein-coding
common_peak1-17292-27-24-0.347689761120511-0.550049347815233	chr6	136808489	136809294	+	0	NA	Intergenic	Intergenic	-2770	NM_026639	109978	Mm.31840	NM_026639	ENSMUSG00000030217	Art4	4432404K01Rik|ARTC4|DO|DOK1	ADP-ribosyltransferase 4	protein-coding
unique_peak1-3937-8-7-0.00522241794757061-1.00793137938329	chr2	27671537	27671999	+	0	NA	Intergenic	Intergenic	-70177	NM_015734	12831	Mm.7281	NM_015734	ENSMUSG00000026837	Col5a1	AI413331	collagen, type V, alpha 1	protein-coding
unique_peak2-35177-7-9--0.522837264589173-1.05908390183068	chr16	45837532	45838073	+	0	NA	intron (NM_153412, intron 1 of 17)	intron (NM_153412, intron 1 of 17)	6689	NM_153412	208177	Mm.211477	NM_153412	ENSMUSG00000033149	Phldb2	AV253284|C820004H04Rik|LL5b|LL5beta	pleckstrin homology-like domain, family B, member 2	protein-coding
common_peak2-26115-50-37-0.793012803035367-2.09824894066342	chr2	5950824	5952099	+	0	NA	intron (NM_001081132, intron 15 of 21)	intron (NM_001081132, intron 15 of 21)	78946	NM_001081132	326622	Mm.31102	NM_001081132	ENSMUSG00000043241	Upf2	-	UPF2 regulator of nonsense transcripts homolog (yeast)	protein-coding
common_peak1-16796-73-166--0.69130928604883-3.53491226790913	chr6	42348982	42350694	+	0	NA	promoter-TSS (NM_001001452)	promoter-TSS (NM_001001452)	-399	NM_001001452	387514	Mm.377921	NM_001001452	ENSMUSG00000046652	Tas2r143	Gm1404|Tas2r43|mt2r36	taste receptor, type 2, member 143	protein-coding
common_peak1-14849-39-48-0.00105140280394522-0.303268666669768	chr3	94886351	94887335	+	0	NA	intron (NM_001293707, intron 1 of 14)	intron (NM_001293707, intron 1 of 14)	24009	NM_001293707	18720	Mm.296409	NM_008847	ENSMUSG00000028126	Pip5k1a	PI4P5K-I[a]|PIP5K1-alpha|PIP5KIalpha|Pipk5a	phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha	protein-coding
common_peak2-24119-14-8-0.729291158915332-0.771068449301682	chr16	33400396	33400805	+	0	NA	intron (NM_011749, intron 1 of 8)	intron (NM_011749, intron 1 of 8)	19739	NM_011749	22661	Mm.392667	NM_011749	ENSMUSG00000022811	Zfp148	2210405J08Rik|AI480666|AW045217|BERF-1|BFCOL1|ZBP-89|Znf148	zinc finger protein 148	protein-coding
unique_peak2-32992-4-8--1.19338551529556-1.21878474469819	chr10	60003322	60003904	+	0	NA	intron (NR_045556, intron 7 of 68)	ID_B1|SINE|B4	141139	NM_001164374	100302688	Mm.444135	NM_001164374	ENSMUSG00000090439	Gm17455	-	predicted gene, 17455	protein-coding
common_peak2-23328-25-20-0.469532482566345-0.662033714151238	chr15	37030674	37031535	+	0	NA	Intergenic	Intergenic	-93947	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
common_peak1-12499-25-30--0.0923464050417691-0.304710633611958	chr17	87738348	87739330	+	0	NA	intron (NM_028639, intron 11 of 19)	intron (NM_028639, intron 11 of 19)	56613	NM_028639	225049	Mm.77396	NM_028639	ENSMUSG00000036918	Ttc7	1110035E02Rik|1700007L07Rik|Ttc7a|fsn|hea	tetratricopeptide repeat domain 7	protein-coding
common_peak2-25986-11-7-0.508693584251613-1.21681515183528	chr19	54948548	54949017	+	0	NA	Intergenic	Intergenic	225155	NM_008149	14732	Mm.210196	NM_008149	ENSMUSG00000024978	Gpam	GPAT|GPAT1	glycerol-3-phosphate acyltransferase, mitochondrial	protein-coding
unique_peak1-4892-7-2-1.21412832957703-1.45399745587252	chr4	43982151	43982610	+	0	NA	intron (NM_027450, intron 3 of 4)	intron (NM_027450, intron 3 of 4)	11806	NM_027450	384009	Mm.22213	NM_027450	ENSMUSG00000028480	Glipr2	5730414A08Rik|C77180|GAPR-1	GLI pathogenesis-related 2	protein-coding
common_peak2-26819-123-143-0.425898248564494-1.92272533177824	chr2	152105096	152106277	+	0	NA	3' UTR (NM_007788, exon 13 of 13)	3' UTR (NM_007788, exon 13 of 13)	-13922	NM_024196	67231	Mm.288733	NM_024196		Tbc1d20	1110028I04Rik|2810442O16Rik|AI414693	TBC1 domain family, member 20	protein-coding
common_peak1-12975-42-19-1.42040123297982-4.09923233888539	chr19	4045393	4046182	+	0	NA	Intergenic	PB1D10|SINE|Alu	-3566	NM_181796	14869	Mm.441542	NM_181796	ENSMUSG00000038155	Gstp2	GSTpiA|Gst-3|Gst3	glutathione S-transferase, pi 2	protein-coding
common_peak1-11785-25-31--0.138150094654894-0.315509160416417	chr16	46496211	46497148	+	0	NA	intron (NM_021495, intron 1 of 5)	CpG	401	NM_021496	58998	Mm.328072	NM_021495	ENSMUSG00000022656	Pvrl3	2610301B19Rik|3000002N23Rik|4921513D19Rik|AA407785|AU016832|AW538082|CD113	poliovirus receptor-related 3	protein-coding
common_peak2-23994-14-16--0.188246680892695-0.308035960714963	chr16	18836480	18836994	+	0	NA	promoter-TSS (NM_001033164)	promoter-TSS (NM_001033164)	64	NM_001033164	72307	Mm.36907	NM_001033164	ENSMUSG00000071632	2510002D24Rik	2410043I01Rik|AA163535|AA409624|DXMgi27	RIKEN cDNA 2510002D24 gene	protein-coding
unique_peak1-2151-8-2-1.42025991722641-1.65811743852845	chr15	59027111	59027526	+	0	NA	Intergenic	Intergenic	-111185	NR_045613	100416830	Mm.490788	NR_045613	ENSMUSG00000098528	Zfp572	4930472F24Rik	zinc finger protein 572	pseudo
common_peak2-19661-8-6-0.197867495889966-1.03789460276074	chr1	52845030	52845400	+	0	NA	Intergenic	Intergenic	29317	NM_008384	16329	Mm.917	NM_008384	ENSMUSG00000026102	Inpp1	2300002C06Rik|AV137389	inositol polyphosphate-1-phosphatase	protein-coding
common_peak1-14919-17-51--1.48214337993605-3.59866429024318	chr3	98355144	98355978	+	0	NA	TTS (NM_008294).2	TTS (NM_008294).2	12305	NM_001111336	15495	Mm.14309	NM_008294	ENSMUSG00000095143	Hsd3b4	-	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 4	protein-coding
common_peak2-30420-10-11--0.228547155712387-0.31137425193576	chr7	41392877	41393317	+	0	NA	Intergenic	Intergenic	-2079885	NM_001013810	434171	Mm.60990	NM_001013810	ENSMUSG00000060565	Gm5591	EG434171	predicted gene 5591	protein-coding
common_peak2-27036-17-29--0.688594257403481-0.756750750680359	chr2	180119232	180119988	+	0	NA	promoter-TSS (NR_045331)	promoter-TSS (NR_045331)	-699	NR_045331	622283	Mm.447602	NR_045331		Gm6307	EG622283	predicted gene 6307	ncRNA
unique_peak2-37964-3-6--1.22133801201688-1.08602067057793	chr6	53509764	53510162	+	0	NA	Intergenic	MIRb|SINE|MIR	-13405	NM_172728	231991	Mm.321138	NM_172728	ENSMUSG00000053007	Creb5	Crebpa|D430026C09Rik	cAMP responsive element binding protein 5	protein-coding
common_peak2-20209-15-13-0.204809828498052-0.368541233333383	chr1	178369083	178369776	+	0	NA	Intergenic	(GA)n|Simple_repeat|Simple_repeat	-163986	NM_176916	319455	Mm.338001	NM_176916	ENSMUSG00000055214	Pld5	B230365F16Rik	phospholipase D family, member 5	protein-coding
common_peak2-30597-16-31--0.881736357731938-1.20073456579999	chr7	81523069	81524136	+	0	NA	intron (NM_001038643, intron 2 of 10)	MLT1A0|LTR|MaLR	176064	NM_023908	108116	Mm.425467	NM_023908	ENSMUSG00000025790	Slco3a1	5830414C08Rik|Anr1|MJAM|OATP-D|R75096|Slc21a11	solute carrier organic anion transporter family, member 3a1	protein-coding
common_peak2-29001-66-66-0.452394473968069-1.23432943332867	chr5	108668780	108669990	+	0	NA	Intergenic	B2_Mm1a|SINE|B2	-28531	NM_026106	13486	Mm.303534	NM_026106	ENSMUSG00000029265	Dr1	1700121L09Rik|Dr1l|NC2|NC2beta	down-regulator of transcription 1	protein-coding
unique_peak2-33161-11-17--0.661231417190699-0.58239619684445	chr10	93188550	93189290	+	0	NA	intron (NM_021320, intron 5 of 9)	BC1_Mm|scRNA|scRNA	-42853	NR_038017	100504069	Mm.391412	NR_038017	ENSMUSG00000085723	Gm15915	OTTMUSG00000027787	predicted gene 15915	ncRNA
common_peak2-20123-9-8-0.0196884049619079-1.03275496310833	chr1	163994864	163995394	+	0	NA	intron (NM_172646, intron 16 of 19)	L1Md_T|LINE|L1	60029	NR_040562	72753	Mm.452125	NR_040562	ENSMUSG00000090260	2810442N19Rik	-	RIKEN cDNA 2810442N19 gene	ncRNA
common_peak1-14157-8-11--0.579740082773585-1.14218153353838	chr2	133716198	133716621	+	0	NA	Intergenic	L1Md_F2|LINE|L1	338514	NM_007553	12156	Mm.103205	NM_007553	ENSMUSG00000027358	Bmp2	AI467020|Bmp2a	bone morphogenetic protein 2	protein-coding
unique_peak1-7399-9-7-0.18961340640422-1.05908390183068	chrX	126748747	126749207	+	0	NA	intron (NM_172493, intron 23 of 26)	intron (NM_172493, intron 23 of 26)	464699	NM_172493	54004	Mm.10763	NM_017398	ENSMUSG00000034480	Diap2	Dia3|Diaph2|Drf2|E430022I22Rik	diaphanous homolog 2 (Drosophila)	protein-coding
common_peak1-15951-18-22--0.210642804828661-0.321718508207525	chr5	30232708	30233464	+	0	NA	intron (NR_105781, intron 1 of 2)	ORR1A1-int|LTR|MaLR	-106615	NM_031168	16193	Mm.1019	NM_031168	ENSMUSG00000025746	Il6	Il-6	interleukin 6	protein-coding
unique_peak2-37594-2-10--2.37688587490062-2.09384600808989	chr5	47922208	47922687	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-451947	NR_111900	20563	Mm.289739	NM_178804		Slit2	Drad-1|E030015M03Rik|E130320P19Rik|Slil3|mKIAA4141|slit-2	slit homolog 2 (Drosophila)	protein-coding
common_peak2-21886-38-27-0.764097737240927-1.59508594240593	chr12	113098175	113099113	+	0	NA	intron (NM_011625, intron 3 of 16)	intron (NM_011625, intron 3 of 16)	46263	NM_026752	68520	Mm.390497	NM_026752	ENSMUSG00000021286	Zfyve21	1110013H04Rik|AW558780|C85416	zinc finger, FYVE domain containing 21	protein-coding
common_peak1-17930-7-10--0.660340788339108-1.12966497611638	chr7	127207957	127208521	+	0	NA	Intergenic	Intergenic	-37701	NM_145586	233806	Mm.257952	NM_145586	ENSMUSG00000030917	Tmem159	8430420C20Rik	transmembrane protein 159	protein-coding
common_peak1-8008-8-12--0.695217300193522-0.475924844171029	chr1	166130257	166130723	+	0	NA	intron (NM_007976, intron 15 of 24)	intron (NM_007976, intron 15 of 24)	-48142	NR_037987	100503816	Mm.398579	NR_037987	ENSMUSG00000086593	Gm16548	-	predicted gene 16548	ncRNA
common_peak2-25833-12-6-0.841421063030034-1.58711810488664	chr19	40588136	40588565	+	0	NA	promoter-TSS (NM_178362)	promoter-TSS (NM_178362)	-48	NM_009166	20411	Mm.210815	NM_009166		Sorbs1	2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296	sorbin and SH3 domain containing 1	protein-coding
common_peak1-8322-64-70-0.315699282203921-0.747287521987093	chr10	43478186	43480319	+	0	NA	intron (NR_040581, intron 1 of 3)	MER21B|LTR|ERV1	13288	NR_040581	69443	Mm.484042	NR_040581		1700027J07Rik	-	RIKEN cDNA 1700027J07 gene	ncRNA
common_peak1-9403-18-11-0.727956650507195-0.876666802405043	chr11	100618954	100619771	+	0	NA	intron (NM_001081194, intron 1 of 16)	MIR3|SINE|MIR	1730	NM_001081194	380728	Mm.297539	NM_001081194	ENSMUSG00000035355	Kcnh4	BEC2	potassium voltage-gated channel, subfamily H (eag-related), member 4	protein-coding
common_peak1-15719-57-69-0.136750023133962-0.396265517229168	chr4	141300991	141303206	+	0	NA	promoter-TSS (NM_001081408)	promoter-TSS (NM_001081408)	-492	NM_001081408	75986	Mm.30032	NM_001081408	ENSMUSG00000040706	Agmat	5033405N08Rik	agmatine ureohydrolase (agmatinase)	protein-coding
unique_peak2-39785-12-39--1.67315210979972-3.25519915520379	chrX	10717307	10718663	+	0	NA	Intergenic	MLT1F2|LTR|MaLR	-158398	NM_001111037	100042922	Mm.374311	NM_001111037	ENSMUSG00000095208	Gm14483	OTTMUSG00000016789	predicted gene 14483	protein-coding
common_peak2-28459-10-13--0.450939577048835-0.386243247519795	chr4	151862030	151862539	+	0	NA	intron (NM_153424, intron 2 of 29)	intron (NM_153424, intron 2 of 29)	10033	NM_153424	260305	Mm.302496	NM_153424	ENSMUSG00000039577	Nphp4	4930564O18Rik|nmf192	nephronophthisis 4 (juvenile) homolog (human)	protein-coding
common_peak2-20389-53-83--0.251344410362832-0.504282745370237	chr10	19907303	19907891	+	0	NA	intron (NM_008635, intron 1 of 17)	intron (NM_008635, intron 1 of 17)	14063	NR_045350	73811	Mm.55644	NR_045350		4930405J17Rik	-	RIKEN cDNA 4930405J17 gene	ncRNA
common_peak1-9193-8-14--0.901668177660948-0.660903317613906	chr11	79992219	79992782	+	0	NA	TTS (NM_172133)	TTS (NM_172133)	-4874	NM_028019	71956	Mm.22985	NM_028019	ENSMUSG00000020707	Rnf135	0610037N03Rik|2410006N06Rik	ring finger protein 135	protein-coding
unique_peak1-3510-16-7-1.11826364226806-1.23399803405144	chr19	16272813	16273703	+	0	NA	intron (NM_008139, intron 1 of 6)	intron (NM_008139, intron 1 of 6)	34670	NR_033228	595139	Mm.405662	NR_033228		E030024N20Rik	9030417F11Rik|Ppia-ps8	peptidylprolyl isomerase A pseudogene 8	pseudo
common_peak2-27521-16-29--0.788626953340457-0.98872314135509	chr3	95693341	95694474	+	0	NA	TTS (NR_040446)	TTS (NR_040446)	1946	NM_153513	229600	Mm.89556	NM_153513	ENSMUSG00000038543	BC028528	L259	cDNA sequence BC028528	protein-coding
unique_peak1-5400-11-4-1.18676548936425-1.68134727924692	chr5	104385028	104385574	+	0	NA	exon (NM_198030, exon 7 of 7)	exon (NM_198030, exon 7 of 7)	21106	NM_198030	243168	Mm.284944	NM_198030	ENSMUSG00000034528	Hsd17b13	AI047820|PAN1B-like|Pan1b	hydroxysteroid (17-beta) dehydrogenase 13	protein-coding
common_peak1-11404-44-37-0.57396532112495-1.23216191351736	chr15	98662191	98663242	+	0	NA	promoter-TSS (NM_016781)	promoter-TSS (NM_016781)	-777	NM_016781	19082	Mm.6670	NM_016781	ENSMUSG00000067713	Prkag1	AA571379|BB036179|Prkaac	protein kinase, AMP-activated, gamma 1 non-catalytic subunit	protein-coding
common_peak1-15731-52-62-0.130980066765782-0.382291706502806	chr4	147904018	147905260	+	0	NA	exon (NM_020009, exon 35 of 58)	exon (NM_020009, exon 35 of 58)	-27897	NM_016699	50912	Mm.266635	NM_016699	ENSMUSG00000017264	Exosc10	PM-Scl|PM/Scl-100|Pmscl2|RRP6|p2|p3|p4	exosome component 10	protein-coding
common_peak2-31342-39-33-0.528298405668814-0.983321682013132	chr8	84066814	84067490	+	0	NA	intron (NM_001297596, intron 2 of 24)	intron (NM_001297596, intron 2 of 24)	200691	NM_001297593	234515	Mm.324468	NM_001024617	ENSMUSG00000037940	Inpp4b	E130107I17Rik	inositol polyphosphate-4-phosphatase, type II	protein-coding
common_peak1-9980-9-7-0.18961340640422-1.05908390183068	chr13	5865262	5865741	+	0	NA	intron (NM_011803, intron 2 of 3)	intron (NM_011803, intron 2 of 3)	4766	NM_011803	23849	Mm.275036	NM_011803	ENSMUSG00000000078	Klf6	AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9	Kruppel-like factor 6	protein-coding
common_peak2-26076-20-28--0.369906210536379-0.457753417732779	chr2	109280719	109281611	+	0	NA	Intergenic	Intergenic	160270	NM_139303	228421	Mm.274086	NM_139303	ENSMUSG00000027115	Kif18a	AU024633|B130001M12Rik	kinesin family member 18A	protein-coding
common_peak2-22172-14-30--1.05498015002923-1.40782320807776	chr12	100110138	100110923	+	0	NA	intron (NM_001081191, intron 7 of 43)	B3A|SINE|B2	29164	NM_001081191	319670	Mm.390484	NM_001081191	ENSMUSG00000051166	Eml5	BC027154|C130068M19Rik	echinoderm microtubule associated protein like 5	protein-coding
common_peak1-14572-17-8-1.04837133676273-1.30305656033811	chr3	37976465	37977078	+	0	NA	Intergenic	Intergenic	130270	NR_040541	71342	Mm.410782	NR_040541		5430434I15Rik	-	RIKEN cDNA 5430434I15 gene	ncRNA
common_peak2-23183-38-44-0.0795995629688555-0.338806640379593	chr15	58933049	58934225	+	0	NA	Intergenic	RLTR14|LTR|ERV1	-20056	NM_144800	211401	Mm.215481	NM_144800	ENSMUSG00000022353	Mtss1	2310003N14Rik|BC024131|D130001D01Rik|Mim|mKIAA0429	metastasis suppressor 1	protein-coding
common_peak1-11706-60-77-0.0688896427582826-0.335178273031072	chr16	32078292	32079480	+	0	NA	intron (NM_177326, intron 1 of 14)	CpG	542	NM_177326	224105	Mm.234204	NM_177326	ENSMUSG00000022781	Pak2	5330420P17Rik|A130002K10Rik|AI836325|D16Ertd269e|PAK-2|mKIAA4182	p21 protein (Cdc42/Rac)-activated kinase 2	protein-coding
unique_peak1-763-9-4-0.867685311516858-1.36011389749466	chr10	121505259	121505695	+	0	NA	Intergenic	Intergenic	11458	NR_004052	668272	Mm.236764	NR_004052		Gm9079	-	transmembrane emp24 domain trafficking protein 2 pseudogene	pseudo
common_peak2-27582-23-26--0.0331199976543877-0.301029995663988	chr3	101116726	101117626	+	0	NA	Intergenic	Intergenic	-25314	NM_013486	12481	Mm.22842	NM_013486	ENSMUSG00000027863	Cd2	LFA-2|Ly-37|Ly37	CD2 antigen	protein-coding
common_peak2-30327-12-20--0.743541437691122-0.625923329873571	chr7	25077256	25077899	+	0	NA	intron (NM_009561, intron 6 of 6)	intron (NM_009561, intron 6 of 6)	6991	NM_009561	22719	Mm.12832	NM_009561	ENSMUSG00000050605	Zfp61	-	zinc finger protein 61	protein-coding
common_peak2-26969-31-32-0.18084455145467-0.379775532323848	chr2	167014506	167015788	+	0	NA	promoter-TSS (NM_008420)	promoter-TSS (NM_008420)	-829	NM_008420	16500	Mm.205341	NM_008420		Kcnb1	Kcr1-1|Kv2.1|Shab	potassium voltage gated channel, Shab-related subfamily, member 1	protein-coding
common_peak1-10263-20-23--0.0968877161299631-0.305855887145851	chr13	55570822	55571610	+	0	NA	intron (NM_001030296, intron 1 of 2)	intron (NM_001030296, intron 1 of 2)	5588	NM_001030296	432763	Mm.315457	NM_001030296	ENSMUSG00000034686	Prr7	XM_484263	proline rich 7 (synaptic)	protein-coding
unique_peak1-225-8-6-0.197867495889966-1.03789460276074	chr1	88559181	88559609	+	0	NA	Intergenic	L1_Mus2|LINE|L1	7753	NM_010933	18159	Mm.12802	NM_010933	ENSMUSG00000026241	Nppc	CNP|lbab	natriuretic peptide type C	protein-coding
common_peak1-14306-14-28--0.958764834769927-1.16796998271031	chr2	161108361	161108986	+	0	NA	Intergenic	Intergenic	-173881	NM_173368	71389	Mm.122738	NM_173368	ENSMUSG00000057133	Chd6	5430439G14Rik|6330406J24Rik|CHD-6	chromodomain helicase DNA binding protein 6	protein-coding
unique_peak2-37713-8-9--0.316705676939792-1.03275496310833	chr5	104381056	104381633	+	0	NA	Intergenic	MLT1A0|LTR|MaLR	25063	NM_198030	243168	Mm.284944	NM_198030	ENSMUSG00000034528	Hsd17b13	AI047820|PAN1B-like|Pan1b	hydroxysteroid (17-beta) dehydrogenase 13	protein-coding
unique_peak2-37567-10-18--0.891512168434816-0.804350088532826	chr5	33782080	33782773	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-5687	NM_011320	672284		NM_011320		Nkx1-1	Nkx-1.1|Sax2	NK1 transcription factor related, locus 1 (Drosophila)	protein-coding
unique_peak2-32885-5-9--1.02630843089322-1.21398586181642	chr10	12867600	12868054	+	0	NA	Intergenic	L1MB3|LINE|L1	30002	NM_029172	75122	Mm.159433	NM_029172	ENSMUSG00000019815	Zc2hc1b	4930519B02Rik|Fam164b	zinc finger, C2HC-type containing 1B	protein-coding
common_peak1-13470-13-23--0.806490470083387-0.781208772652439	chr2	69205575	69206250	+	0	NA	Intergenic	L1_Rod|LINE|L1	-12607	NM_175512	241452	Mm.211655	NM_175512		Dhrs9	C730025I08Rik|Rdh15	dehydrogenase/reductase (SDR family) member 9	protein-coding
common_peak2-23824-60-67-0.266829020370192-0.629493032588487	chr15	101320998	101322378	+	0	NA	exon (NM_001201323, exon 1 of 9)	exon (NM_001201323, exon 1 of 9)	255	NM_001201323	100126226	Mm.347934	NM_001201323	ENSMUSG00000067613	5430421N21Rik	-	RIKEN cDNA 5430421N21 gene	protein-coding
common_peak2-30030-7-14--1.10779976531033-0.817533494790411	chr6	125426612	125427110	+	0	NA	intron (NM_007657, intron 1 of 7)	intron (NM_007657, intron 1 of 7)	17912	NM_007657	12527	Mm.210676	NM_007657	ENSMUSG00000030342	Cd9	Tspan29	CD9 antigen	protein-coding
unique_peak2-39573-6-14--1.34149248522822-1.01572999746118	chr9	73113403	73113891	+	0	NA	Intergenic	Intergenic	152371	NM_198609	225215	Mm.379366	NM_198609	ENSMUSG00000032215	Rsl24d1	2410159K22Rik	ribosomal L24 domain containing 1	protein-coding
common_peak2-31674-37-38-0.24059085262357-0.466726531031556	chr8	126838649	126839814	+	0	NA	intron (NM_139272, intron 3 of 15)	intron (NM_139272, intron 3 of 15)	83937	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
unique_peak2-32852-9-13--0.617741515653384-0.459837087125828	chr10	21790249	21790829	+	0	NA	Intergenic	Intergenic	-2654	NM_053264	114671	Mm.288194	NM_053264	ENSMUSG00000069712	4930444G20Rik	-	RIKEN cDNA 4930444G20 gene	protein-coding
unique_peak1-3841-12-1-2.64877598508764-3.36932189928148	chr2	4478344	4478905	+	0	NA	intron (NM_172475, intron 11 of 22)	intron (NM_172475, intron 11 of 22)	-2176	NM_001177844	209630	Mm.37932	NM_172475	ENSMUSG00000026657	Frmd4a	2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|OTTMUSG00000010806|mKIAA1294	FERM domain containing 4A	protein-coding
unique_peak1-2433-10-5-0.771452844287613-1.33892459842472	chr15	101382822	101383346	+	0	NA	3' UTR (NM_177717, exon 9 of 9)	3' UTR (NM_177717, exon 9 of 9)	-1994	NM_053249	114566	Mm.458432	NM_053249	ENSMUSG00000049548	Krt82	Krt2-20	keratin 82	protein-coding
unique_peak1-1056-9-1-2.18961340640422-2.31132995230379	chr11	79779938	79780464	+	0	NA	Intergenic	Intergenic	-4312	NM_144826	216987	Mm.274961	NM_144826	ENSMUSG00000035575	Utp6	4732497O03Rik|HCA66	UTP6, small subunit (SSU) processome component, homolog (yeast)	protein-coding
common_peak1-9844-24-21-0.333778284130419-0.518921928796332	chr12	78861524	78862580	+	0	NA	Intergenic	MLT1H|LTR|MaLR	350924	NM_001252616	53618	Mm.35628	NM_016893	ENSMUSG00000021065	Fut8	-	fucosyltransferase 8	protein-coding
unique_peak2-38017-5-6--0.511735258063458-0.947717972411649	chr6	32929826	32930195	+	0	NA	intron (NM_025336, intron 3 of 7)	L1M6|LINE|L1	80142	NM_025336	66075	Mm.21501	NM_025336	ENSMUSG00000053768	Chchd3	0610041L09Rik|1700039J09Rik|AW558177	coiled-coil-helix-coiled-coil-helix domain containing 3	protein-coding
common_peak2-32209-12-9-0.326847890200276-0.459837087125828	chr9	120927130	120927529	+	0	NA	intron (NM_177589, intron 35 of 36)	intron (NM_177589, intron 35 of 36)	63125	NR_106058	102465661		NR_106058		Mir7090	mmu-mir-7090	microRNA mir-7090	ncRNA
unique_peak2-33087-8-15--0.994777582052429-0.771068449301683	chr10	80160928	80161702	+	0	NA	intron (NM_172457, intron 1 of 3)	RMER1B|Other|Other	3250	NM_172457	208228	Mm.49309	NM_172457	ENSMUSG00000003348	Mob3a	5330417K06Rik|A630029F06|AV218468|Mobkl2a	MOB kinase activator 3A	protein-coding
common_peak1-7534-14-20--0.493101262421116-0.456667090758524	chr1	34434961	34435652	+	0	NA	Intergenic	Intergenic	54738	NR_039562	100628580		NR_039562	miRBase:MI0018011	Mir5103	mmu-mir-5103|mu-mir-5103	microRNA 5103	ncRNA
common_peak1-17016-33-17-1.16141256108322-2.37490429172804	chr6	91015720	91016848	+	0	NA	intron (NM_018815, intron 13 of 39)	MTD|LTR|MaLR	50536	NM_018815	54563	Mm.28162	NM_018815	ENSMUSG00000030091	Nup210	9830001L10|AI836801|Pom210|gp190|gp210	nucleoporin 210	protein-coding
unique_peak1-1123-18-14-0.406028555619833-0.532159081577619	chr11	94957435	94958522	+	0	NA	Intergenic	Intergenic	-19950	NM_013565	16400	Mm.57035	NM_013565	ENSMUSG00000001507	Itga3	AA407068|CD49C|GAPB3	integrin alpha 3	protein-coding
unique_peak2-33591-4-6--0.830815435910851-0.989110657569874	chr11	87987690	87988131	+	0	NA	intron (NM_001172099, intron 1 of 9)	intron (NM_001172099, intron 1 of 9)	4843	NM_001172099	103841	Mm.374846	NM_198013	ENSMUSG00000018378	Cuedc1	AI841487|C330016O16Rik	CUE domain containing 1	protein-coding
unique_peak1-2301-9-1-2.18961340640422-2.31132995230379	chr15	81071606	81072213	+	0	NA	Intergenic	Intergenic	5980	NM_145132	207911	Mm.323523	NM_145132	ENSMUSG00000050164	Mchr1	AW049955|Gpr24|Mch1r	melanin-concentrating hormone receptor 1	protein-coding
common_peak1-11418-58-35-1.12602493344818-4.08621821320449	chr15	99473428	99475328	+	0	NA	intron (NM_012025, intron 1 of 17)	intron (NM_012025, intron 1 of 17)	7709	NM_001253808	26934	Mm.273804	NM_012025	ENSMUSG00000023015	Racgap1	AI227039|AI327394|Band25|GTPase|MgcRacGAP|gtl11|mKIAA1478	Rac GTPase-activating protein 1	protein-coding
unique_peak1-3293-10-4-1.03448725012141-1.5150158574804	chr18	75387882	75388439	+	0	NA	intron (NM_027727, intron 14 of 16)	intron (NM_027727, intron 14 of 16)	68811	NR_045394	100503117	Mm.250517	NR_045393		2010010A06Rik	5033420E22Rik	RIKEN cDNA 2010010A06 gene	ncRNA
unique_peak1-5749-14-6-1.09186123830004-1.16633110333236	chr6	50261279	50261992	+	0	NA	intron (NM_027881, intron 16 of 21)	intron (NM_027881, intron 16 of 21)	-49867	NM_018769	54722	Mm.248361	NM_018769	ENSMUSG00000029821	Dfna5	2310037D07Rik|4932441K13Rik|Dfna5h|EG14210|Fin15	deafness, autosomal dominant 5 (human)	protein-coding
common_peak2-26807-11-6-0.701338662194009-1.32595962126035	chr2	150767945	150768447	+	0	NA	intron (NM_207204, intron 19 of 23)	intron (NM_207204, intron 19 of 23)	32866	NM_001163476	69270	Mm.271603	NM_027014	ENSMUSG00000027454	Gins1	2810418N01Rik|Gins4|PSF1|mKIAA0186	GINS complex subunit 1 (Psf1 homolog)	protein-coding
common_peak2-22717-16-20--0.274053780510699-0.353907621462756	chr13	103977782	103978753	+	0	NA	intron (NM_175171, intron 1 of 28)	intron (NM_175171, intron 1 of 28)	146305	NM_175171	328329	Mm.202606	NM_175171	ENSMUSG00000034751	Mast4	4930420O11Rik|AI642422|mKIAA0303	microtubule associated serine/threonine kinase family member 4	protein-coding
common_peak1-8017-8-9--0.316705676939792-1.03275496310833	chr1	168501316	168501825	+	0	NA	Intergenic	(CAAAC)n|Simple_repeat|Simple_repeat	-73851	NM_001164306	226601	Mm.475593	NM_001164306	ENSMUSG00000086056	Gm4846	EG226601|Fmo13	predicted gene 4846	protein-coding
common_peak1-14239-14-9-0.577288065470282-0.630231561310125	chr2	153274488	153275037	+	0	NA	intron (NM_001134300, intron 4 of 10)	Lx|LINE|L1	-4547	NM_001001986	329540	Mm.50600	NM_001001986	ENSMUSG00000061411	Nol4l	4931410H15|8430427H17Rik|AI429157|Gm1636	nucleolar protein 4-like	protein-coding
common_peak2-21045-9-9--0.132314688483142-1.03275496310833	chr11	40402502	40402928	+	0	NA	Intergenic	MLT1G|LTR|MaLR	103469	NM_134017	108645	Mm.293771	NM_134017	ENSMUSG00000042032	Mat2b	1110064C04Rik|2410018D16Rik|AI182287|AU022853|MAT-II|MATIIbeta|TGR	methionine adenosyltransferase II, beta	protein-coding
unique_peak2-39948-4-11--1.6084230145744-1.68134727924692	chrX	137049576	137050072	+	0	NA	Intergenic	Intergenic	27383	NR_122039	14605	Mm.22216	NM_010286	ENSMUSG00000031431	Tsc22d3	DIP|Dsip1|Gilz|TSC-22R|Tilz3	TSC22 domain family, member 3	protein-coding
unique_peak1-6195-9-0-3.18961340640422-3.01029995663981	chr6	148290403	148291014	+	0	NA	intron (NM_198967, intron 5 of 19)	intron (NM_198967, intron 5 of 19)	-12470	NR_003634	66184	Mm.391542	NM_025405	ENSMUSG00000063171	Rps4l	1110033J19Rik|AA407494|Rps4y2	ribosomal protein S4-like	pseudo
unique_peak2-37652-7-15--1.20090916970181-0.947446088118041	chr5	91402342	91403117	+	0	NA	intron (NM_026788, intron 5 of 7)	intron (NM_026788, intron 5 of 7)	42507	NM_026788	665563	Mm.153030	NM_026788	ENSMUSG00000029376	Mthfd2l	1110019K23Rik|C630010D07Rik	methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like	protein-coding
common_peak2-25308-10-21--1.10301627362853-1.16735254179725	chr18	74778136	74778879	+	0	NA	intron (NM_201600, intron 5 of 38)	B1F2|SINE|Alu	-87729	NR_045368	73606	Mm.444734	NR_045368		1700120E14Rik	-	RIKEN cDNA 1700120E14 gene	ncRNA
common_peak1-11978-37-72--0.663831487394199-1.55529262229468	chr17	8282355	8283494	+	0	NA	intron (NM_001033442, intron 2 of 3).2	intron (NM_001033442, intron 2 of 3).2	11169	NM_001033442	381059	Mm.490353	NM_001033442		Gm1604b	ENSMUSG00000073470|Gm1604	predicted gene 1604b	protein-coding
unique_peak1-2516-7-0-2.79909083029819-2.40823996531185	chr16	18970506	18970999	+	0	NA	TTS (NM_010435)	TTS (NM_010435)	93909	NM_010435	15260	Mm.15694	NM_010435	ENSMUSG00000022702	Hira	AA138857|D16Ertd95e|N28177|Tuple1	histone cell cycle regulation defective homolog A (S. cerevisiae)	protein-coding
common_peak2-29042-55-73--0.00483349447624803-0.302507199172891	chr5	115010998	115012170	+	0	NA	Intergenic	Intergenic	-6676	NM_001004180	433940	Mm.194212	NM_001004180	ENSMUSG00000041930	Fam222a	-	family with sequence similarity 222, member A	protein-coding
unique_peak2-37804-4-10--1.48289213249054-1.5150158574804	chr5	123523606	123524168	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-2397	NM_001039723	330189	Mm.391872	NM_001039723	ENSMUSG00000054434	Tmem120b	-	transmembrane protein 120B	protein-coding
unique_peak1-2722-16-7-1.11826364226806-1.23399803405144	chr16	92623566	92624272	+	0	NA	intron (NM_001111022, intron 5 of 6)	intron (NM_001111022, intron 5 of 6)	73655	NM_001111023	12394	Mm.4081	NM_009821	ENSMUSG00000022952	Runx1	AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b	runt related transcription factor 1	protein-coding
unique_peak1-638-7-1-1.79909083029819-1.80617997398389	chr10	42101525	42102044	+	0	NA	intron (NM_145743, intron 7 of 12)	AT_rich|Low_complexity|Low_complexity	96587	NM_145743	215951	Mm.89646	NM_145743	ENSMUSG00000038302	Lace1	CG8520	lactation elevated 1	protein-coding
unique_peak2-34249-9-19--1.13231468848314-1.09394599973099	chr13	59556595	59557271	+	0	NA	intron (NM_001284221, intron 24 of 24)	intron (NM_001284221, intron 24 of 24)	88879	NM_001284221	67269	Mm.153008	NM_023328	ENSMUSG00000021557	Agtpbp1	1700020N17Rik|2310001G17Rik|2900054O13Rik|4930445M19Rik|5730402G09Rik|CCP1|Nna1|nmf243|pcd	ATP/GTP binding protein 1	protein-coding
common_peak2-23554-28-36--0.156494245807488-0.329362479200675	chr15	79228945	79229796	+	0	NA	intron (NM_172608, intron 1 of 8)	intron (NM_172608, intron 1 of 8)	3979	NM_001253817	223693	Mm.323358	NM_172608	ENSMUSG00000009035	Tmem184b	2610507A11|4732495E13Rik	transmembrane protein 184b	protein-coding
common_peak1-10439-166-268-0.0453858190625489-0.340802776351685	chr13	103919037	103921749	+	0	NA	intron (NM_175171, intron 3 of 28)	intron (NM_175171, intron 3 of 28)	204179	NM_175171	328329	Mm.202606	NM_175171	ENSMUSG00000034751	Mast4	4930420O11Rik|AI642422|mKIAA0303	microtubule associated serine/threonine kinase family member 4	protein-coding
common_peak2-23919-11-6-0.701338662194009-1.32595962126035	chr16	8864019	8864446	+	0	NA	Intergenic	Intergenic	34039	NM_001081400	69053	Mm.390868	NM_001081400	ENSMUSG00000022507	1810013L24Rik	1110017P05Rik|3010002C02Rik|AA792997|AW124177|Gm19906|R74903	RIKEN cDNA 1810013L24 gene	protein-coding
common_peak2-29187-10-7-0.356415345008769-1.12966497611638	chr5	135649043	135649420	+	0	NA	intron (NM_009745, intron 2 of 5)	B3|SINE|B2	4989	NM_009745	12054	Mm.405834	NM_009745	ENSMUSG00000029681	Bcl7b	-	B cell CLL/lymphoma 7B	protein-coding
unique_peak1-5578-7-2-1.21412832957703-1.45399745587252	chr5	149134783	149135306	+	0	NA	Intergenic	MTA_Mm-int|LTR|MaLR	76436	NM_007513	11987	Mm.275489	NM_007513	ENSMUSG00000041313	Slc7a1	4831426K01Rik|AI447493|Atrc-1|Atrc1|Cat1|Rec-1|Rev-1|mCAT-1	solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	protein-coding
common_peak2-32224-24-34--0.33607311417725-0.427313034957882	chr9	122950348	122951195	+	0	NA	intron (NM_177911, intron 3 of 13)	intron (NM_177911, intron 3 of 13)	6912	NM_177911	331046	Mm.195309	NM_177911	ENSMUSG00000025787	Tgm4	9530008N10Rik|Eapa1|TGP	transglutaminase 4 (prostate)	protein-coding
unique_peak2-36307-0-10--4.29956254911151-2.57096726280955	chr2	75640828	75641462	+	0	NA	Intergenic	B3|SINE|B2	-29089	NM_172666	228061	Mm.31227	NM_172666	ENSMUSG00000042410	Agps	5832437L22|9930035G10Rik|AW123847|Adaps|Adas|Adhaps|Adps|Aldhpsy|bs2	alkylglycerone phosphate synthase	protein-coding
common_peak2-22280-19-57--1.45529366846589-4.04946261034137	chr13	9276416	9277457	+	0	NA	intron (NM_001081426, intron 1 of 36)	intron (NM_001081426, intron 1 of 36)	1165	NM_001081426	208440	Mm.217326	NM_172459	ENSMUSG00000048264	Dip2c	2900024P20Rik|9630044M06|mKIAA0934	DIP2 disco-interacting protein 2 homolog C (Drosophila)	protein-coding
common_peak2-29976-14-11-0.314253659636488-0.435191258261915	chr6	120153534	120154064	+	0	NA	TTS (NM_198884)	TTS (NM_198884)	90778	NM_198884	330406	Mm.321840	NM_198884	ENSMUSG00000041372	B4galnt3	AB114826|B4GalNAcT3|C330047A21	beta-1,4-N-acetyl-galactosaminyl transferase 3	protein-coding
common_peak2-22833-13-12-0.0780323124966764-0.334470287753051	chr14	20673767	20674186	+	0	NA	Intergenic	Intergenic	15829	NR_105025	52512	Mm.483998	NR_105025		D14Ertd670e	-	DNA segment, Chr 14, ERATO Doi 670, expressed	ncRNA
common_peak2-23985-10-4-1.03448725012141-1.5150158574804	chr16	18088983	18089418	+	0	NA	promoter-TSS (NM_011172)	promoter-TSS (NM_011172)	83	NM_011172	19125	Mm.28456	NM_011172	ENSMUSG00000003526	Prodh	Pro-1|Pro1|Ym24d07	proline dehydrogenase	protein-coding
common_peak1-10962-29-18-0.864362567171526-1.50628532113231	chr15	27527736	27529060	+	0	NA	Intergenic	Intergenic	27149	NR_106065	102466808		NR_106065		Mir7117	mmu-mir-7117	microRNA mir-7117	ncRNA
unique_peak2-35949-15-10-0.552733131918359-0.604422558181019	chr19	10389021	10389541	+	0	NA	Intergenic	ORR1D1-int|LTR|MaLR	-9914	NM_198114	269060	Mm.329718	NM_198114	ENSMUSG00000035735	Dagla	Nsddr	diacylglycerol lipase, alpha	protein-coding
common_peak2-20069-126-103-0.937220481810733-7.04398826329115	chr1	153129232	153131288	+	0	NA	Intergenic	Intergenic	-61368	NM_001039512	117198	Mm.33764	NM_028582	ENSMUSG00000023150	Ivns1abp	1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850	influenza virus NS1A binding protein	protein-coding
unique_peak2-36171-3-4--0.73591118484664-0.864171920961574	chr2	28935998	28936352	+	0	NA	intron (NM_009442, intron 8 of 11)	intron (NM_009442, intron 8 of 11)	20392	NM_009442	22130	Mm.252195	NM_009442	ENSMUSG00000026803	Ttf1	AV245725|TTF-1|TTF-I	transcription termination factor, RNA polymerase I	protein-coding
common_peak2-28232-19-37--0.845240186781899-1.27201509741564	chr4	120405112	120405958	+	0	NA	intron (NM_001081142, intron 1 of 13)	intron (NM_001081142, intron 1 of 13)	14246	NM_001081142	60613	Mm.249977	NM_001081142	ENSMUSG00000028631	Kcnq4	-	potassium voltage-gated channel, subfamily Q, member 4	protein-coding
common_peak2-27512-36-53--0.275566415995714-0.442998361601932	chr3	95282329	95283800	+	0	NA	intron (NM_001037737, intron 8 of 21)	MER58A|DNA|MER1_type	-20068	NM_007802	13038	Mm.272085	NM_007802	ENSMUSG00000028111	Ctsk	AI323530|MMS10-Q|Ms10q|catK	cathepsin K	protein-coding
common_peak2-29743-17-6-1.41094141614743-1.84350559086818	chr6	86370748	86371134	+	0	NA	intron (NM_011585, intron 6 of 12)	intron (NM_011585, intron 6 of 12)	16728	NM_001164078	21841	Mm.333219	NM_011585	ENSMUSG00000071337	Tia1	2310050N03Rik|AI256674|TIA-1|mTIA-1	cytotoxic granule-associated RNA binding protein 1	protein-coding
unique_peak1-5768-8-2-1.42025991722641-1.65811743852845	chr6	53510585	53510980	+	0	NA	Intergenic	Intergenic	-12586	NM_172728	231991	Mm.321138	NM_172728	ENSMUSG00000053007	Creb5	Crebpa|D430026C09Rik	cAMP responsive element binding protein 5	protein-coding
unique_peak2-32498-1-38--4.91245922907899-10.0214568239646	chr1	44951129	44951385	+	0	NA	Intergenic	Intergenic	-149463	NR_040602	75066	Mm.416932	NR_040602		4930521E06Rik	-	RIKEN cDNA 4930521E06 gene	ncRNA
common_peak2-27324-8-14--0.901668177660948-0.660903317613906	chr3	67430073	67430701	+	0	NA	Intergenic	Lx2|LINE|L1	43697	NM_025813	66868	Mm.491153	NM_025813	ENSMUSG00000027775	Mfsd1	1200003O06Rik	major facilitator superfamily domain containing 1	protein-coding
common_peak1-11636-26-20-0.535581669379702-0.738267116931592	chr16	21332781	21333788	+	0	NA	Intergenic	Intergenic	-36339	NR_046162	328646	Mm.404748	NR_046162	ENSMUSG00000096918	Gm16863	A830060N17	predicted gene, 16863	ncRNA
common_peak1-7746-22-13-0.8399291830298-1.1381569562463	chr1	90899822	90900872	+	0	NA	Intergenic	Intergenic	-12341	NR_040471	73475	Mm.491040	NR_040471		1700067G17Rik	-	RIKEN cDNA 1700067G17 gene	ncRNA
common_peak2-22478-30-15-1.16967540949187-2.23573970698983	chr13	48841417	48842214	+	0	NA	Intergenic	Intergenic	83410	NM_007526	12022	Mm.42241	NM_007526	ENSMUSG00000021381	Barx1	-	BarH-like homeobox 1	protein-coding
common_peak2-20198-21-19-0.247561170378873-0.427564438475253	chr1	175880487	175881074	+	0	NA	Intergenic	Lx4B|LINE|L1	-8157	NM_001045481	15950	Mm.463437	NM_008328	ENSMUSG00000039997	Ifi203	-	interferon activated gene 203	protein-coding
unique_peak2-38024-6-7--0.434601889619698-0.97990265578305	chr6	34910473	34910920	+	0	NA	intron (NM_001025573, intron 2 of 7)	intron (NM_001025573, intron 2 of 7)	17303	NM_001025573	243753	Mm.440221	NM_001025573	ENSMUSG00000029847	2010107G12Rik	Gm468	RIKEN cDNA 2010107G12 gene	protein-coding
common_peak2-27509-11-8-0.338768582809301-1.14218153353838	chr3	95229960	95230483	+	0	NA	Intergenic	RLTR9B2|LTR|ERVK	-1050	NR_033637	100043305	Mm.412052	NR_033637		Gm4349	-	SET domain, bifurcated 1 pseudogene	pseudo
common_peak1-10344-34-33-0.294605685750927-0.53611512876719	chr13	76017956	76018823	+	0	NA	intron (NM_028493, intron 8 of 11)	intron (NM_028493, intron 8 of 11)	41055	NM_053108	93692	Mm.25844	NM_053108	ENSMUSG00000021591	Glrx	C86710|D13Wsu156e|Glrx1|Grx1|TTase	glutaredoxin	protein-coding
common_peak1-11903-43-39-0.46063509063634-0.895298945923416	chr17	23674003	23675794	+	0	NA	Intergenic	Intergenic	26295	NM_001033496	449521	Mm.268582	NM_001033496	ENSMUSG00000071256	Zfp213	BC038178|D17Ertd197e	zinc finger protein 213	protein-coding
common_peak2-31939-27-42--0.434718803806862-0.595371917655149	chr9	64020115	64021440	+	0	NA	promoter-TSS (NM_026507)	promoter-TSS (NM_026507)	-39	NM_026507	68014	Mm.335237	NM_026507	ENSMUSG00000032400	Zwilch	2310031L18Rik	zwilch kinetochore protein	protein-coding
unique_peak2-39437-4-11--1.6084230145744-1.68134727924692	chr9	45430228	45430820	+	0	NA	intron (NM_001081270, intron 3 of 32)	intron (NM_001081270, intron 3 of 32)	-191209	NR_040732	74602	Mm.394117	NR_040732	ENSMUSG00000097074	4833428L15Rik	-	RIKEN cDNA 4833428L15 gene	ncRNA
common_peak2-27129-10-22--1.16714661104824-1.30248952876293	chr3	19894913	19895700	+	0	NA	TTS (NM_001146323)	TTS (NM_001146323)	38252	NM_007752	12870	Mm.13787	NM_007752	ENSMUSG00000003617	Cp	D3Ertd555e	ceruloplasmin	protein-coding
common_peak2-25230-111-171--0.00857096329192952-0.301029995663994	chr18	63691399	63693274	+	0	NA	Intergenic	Intergenic	-145499	NM_001039485	667742	Mm.158720	NM_172629	ENSMUSG00000041482	Piezo2	5930434P17|9030411M15Rik|9430028L06Rik|Fam38b|Fam38b2	piezo-type mechanosensitive ion channel component 2	protein-coding
unique_peak1-467-10-1-2.35641534500877-2.57096726280955	chr1	171377957	171378533	+	0	NA	Intergenic	Intergenic	83350	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
common_peak2-24392-18-13-0.505564229170747-0.625923329873571	chr17	13668130	13668725	+	0	NA	Intergenic	Intergenic	-45895	NR_030763	272667	Mm.444718	NR_030763	ENSMUSG00000079711	Smok4a	4930513D10Rik|Smok2c	sperm motility kinase 4A	pseudo
common_peak1-11764-19-18-0.154759813218101-0.351190433797598	chr16	42874455	42875280	+	0	NA	intron (NR_040522, intron 1 of 1)	intron (NR_040522, intron 1 of 1)	833	NR_040521	75722	Mm.243747	NR_040521	ENSMUSG00000075070	4932412D23Rik	ENSMUSG00000075070|Gm10809	RIKEN cDNA 4932412D23 gene	ncRNA
unique_peak2-38417-4-13--1.83081543591085-2.04196296489515	chr7	24840486	24841064	+	0	NA	TTS (NM_203489)	TTS (NM_203489)	982	NM_203489	209824	Mm.377233	NM_203489	ENSMUSG00000066723	Vmn1r183	Gm476|V1rd15	vomeronasal 1 receptor 183	protein-coding
common_peak1-10527-19-12-0.702247608520594-0.840839978588874	chr14	8665767	8666582	+	0	NA	intron (NM_134080, intron 1 of 45)	MER113|DNA|MER1_type	15703	NM_134080	286940	Mm.489652	NM_134080	ENSMUSG00000025278	Flnb	AL024016|Fln-b	filamin, beta	protein-coding
unique_peak2-36882-5-27--2.51173525806346-3.91086220464714	chr3	95066668	95067430	+	0	NA	intron (NM_173347, intron 4 of 7)	intron (NM_173347, intron 4 of 7)	-11934	NM_134253	171388	Mm.331209	NM_134253	ENSMUSG00000028115	Bnipl	1700128A13Rik|BNIP-S|BNIPL1|BNIPL2|PP73|PP753	BCL2/adenovirus E1B 19kD interacting protein like	protein-coding
unique_peak1-5664-11-5-0.923731083530457-1.477227296591	chr6	31061344	31061883	+	0	NA	intron (NR_110471, intron 3 of 3)	intron (NR_110471, intron 3 of 3)	-48520	NR_029532	387223		NR_029532	miRBase:MI0000143	Mir29b-1	Mirn29b|Mirn29b-1	microRNA 29b-1	ncRNA
common_peak2-20471-18-9-0.990991056340989-1.23014042908325	chr10	43978404	43978996	+	0	NA	Intergenic	MYSERV6-int|LTR|ERVK	-9464	NM_053069	11793	Mm.22264	NM_053069	ENSMUSG00000038160	Atg5	2010107M05Rik|3110067M24Rik|AW319544|Apg5l|Atg5l|C88337|Paddy	autophagy related 5	protein-coding
unique_peak2-34756-1-7--2.62705701021674-1.80617997398389	chr15	56764153	56764530	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-238240	NM_008216	15117	Mm.5148	NM_008216	ENSMUSG00000022367	Has2	-	hyaluronan synthase 2	protein-coding
unique_peak1-5101-12-4-1.32684789020028-2.04196296489515	chr4	150694628	150695180	+	0	NA	intron (NM_001081557, intron 5 of 23)	intron (NM_001081557, intron 5 of 23)	-262842	NM_009498	22319	Mm.273930	NM_009498	ENSMUSG00000028955	Vamp3	D130027G05Rik|VAMP-3|ceb	vesicle-associated membrane protein 3	protein-coding
common_peak1-9332-75-62-0.761787068243368-2.93459514437512	chr11	95776457	95778913	+	0	NA	Intergenic	(TTTTC)n|Simple_repeat|Simple_repeat	-1500	NM_008081	14422	Mm.340702	NM_008081		B4galnt2	AI593864|Dlb-1|Dlb1|Galg2|Galgt2|Ggm3|Igf2bp1	beta-1,4-N-acetyl-galactosaminyl transferase 2	protein-coding
common_peak2-22668-10-7-0.356415345008769-1.12966497611638	chr13	96938203	96938829	+	0	NA	Intergenic	Intergenic	-35984	NM_029210	75209	Mm.40436	NM_029210	ENSMUSG00000051111	Sv2c	4930527L09Rik|AI841971	synaptic vesicle glycoprotein 2c	protein-coding
common_peak2-26157-9-13--0.617741515653384-0.459837087125828	chr2	18056055	18056580	+	0	NA	intron (NR_045538, intron 8 of 22)	B3|SINE|B2	70105	NM_001252561	17354	Mm.209175	NM_010804	ENSMUSG00000026743	Mllt10	Af10|B130021D15Rik|D630001B22Rik|mKIAA4140	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	protein-coding
common_peak1-19499-16-33--0.969199198982277-1.43262124146305	chrX	162759402	162760143	+	0	NA	intron (NM_023122, intron 1 of 6)	intron (NM_023122, intron 1 of 6)	-22713	NM_001177958	14758	Mm.222320	NM_023122	ENSMUSG00000031342	Gpm6b	AI593561|Gpm6|M6B	glycoprotein m6b	protein-coding
common_peak1-17254-15-15-0.0121647505556561-0.30803596071496	chr6	131418131	131418959	+	0	NA	Intergenic	Lx3A|LINE|L1	-75235	NM_001244628	71392	Mm.22800	NM_001244628	ENSMUSG00000094113	5430401F13Rik	-	RIKEN cDNA 5430401F13 gene	protein-coding
unique_peak2-37651-8-7-0.00522241794757061-1.00793137938329	chr5	91075936	91076351	+	0	NA	Intergenic	Intergenic	-6630	NM_028478	73246	Mm.30172	NM_028478	ENSMUSG00000029370	Rassf6	1600016B17Rik	Ras association (RalGDS/AF-6) domain family member 6	protein-coding
unique_peak2-39262-0-4--3.16205902536157-1.10720996964787	chr8	119891052	119891405	+	0	NA	intron (NM_028941, intron 1 of 20)	intron (NM_028941, intron 1 of 20)	18158	NM_028941	74440	Mm.233181	NM_028941	ENSMUSG00000034390	Cmip	4933407C03Rik|5830471E12Rik|AI314065|AI464126	c-Maf inducing protein	protein-coding
common_peak1-10625-36-11-1.8943585854466-5.11006289713063	chr14	36918671	36919670	+	0	NA	Intergenic	Intergenic	11019	NM_175008	218921	Mm.212464	NM_175008	ENSMUSG00000096405	4930474N05Rik	-	RIKEN cDNA 4930474N05 gene	protein-coding
unique_peak1-2815-12-5-1.06381348436648-1.78669045979184	chr17	26123836	26124347	+	0	NA	Intergenic	Intergenic	-21641	NM_015830	50817	Mm.216072	NM_015830	ENSMUSG00000037326	Capn15	Solh	calpain 15	protein-coding
unique_peak1-4050-9-1-2.18961340640422-2.31132995230379	chr2	59696879	59697404	+	0	NA	intron (NM_001159636, intron 9 of 10)	intron (NM_001159636, intron 9 of 10)	23522	NM_001159636	72137	Mm.288734	NM_028118	ENSMUSG00000026988	Wdsub1	1700048E19Rik|2610014F08Rik	WD repeat, SAM and U-box domain containing 1	protein-coding
unique_peak1-6405-12-5-1.06381348436648-1.78669045979184	chr7	80790447	80791069	+	0	NA	Intergenic	L1MA6|LINE|L1	40691	NR_033604	244061	Mm.484605	NR_033604		Gm4971	EG244061	Smad nuclear interacting protein 1 pseudogene	pseudo
unique_peak1-358-7-5-0.214128329577033-1.01466476204226	chr1	138328985	138329522	+	0	NA	intron (NM_026500, intron 5 of 7)	intron (NM_026500, intron 5 of 7)	-17157	NR_024328	320054	Mm.208000	NR_024328	ENSMUSG00000097403	9230116N13Rik	-	RIKEN cDNA 9230116N13 gene	ncRNA
unique_peak2-39702-7-9--0.522837264589173-1.05908390183068	chr9	113929991	113930479	+	0	NA	intron (NM_178624, intron 1 of 14)	B4A|SINE|B4	5634	NM_178624	72179	Mm.386808	NM_178624	ENSMUSG00000032507	Fbxl2	2810423A21Rik|Fbl3	F-box and leucine-rich repeat protein 2	protein-coding
common_peak2-26585-39-25-0.915321528778062-2.02221055290443	chr2	109277697	109278393	+	0	NA	Intergenic	Intergenic	157150	NM_139303	228421	Mm.274086	NM_139303	ENSMUSG00000027115	Kif18a	AU024633|B130001M12Rik	kinesin family member 18A	protein-coding
common_peak2-24403-74-168--0.684992859303577-3.48665190209289	chr17	14977921	14979639	+	0	NA	intron (NM_175173, intron 23 of 24)	intron (NM_175173, intron 23 of 24)	101349	NM_175173	71682	Mm.122698	NM_175173	ENSMUSG00000046991	Wdr27	0610012K18Rik	WD repeat domain 27	protein-coding
common_peak2-31297-7-9--0.522837264589173-1.05908390183068	chr8	73341855	73342326	+	0	NA	intron (NM_008353, intron 13 of 15)	L1Md_F2|LINE|L1	9742	NM_008353	16161	Mm.731	NM_008353	ENSMUSG00000000791	Il12rb1	CD212|IL-12R[b]	interleukin 12 receptor, beta 1	protein-coding
common_peak2-21361-30-48--0.445034434623335-0.674559023890888	chr11	78176138	78177870	+	0	NA	intron (NM_008238, intron 6 of 8)	intron (NM_008238, intron 6 of 8)	19980	NM_011676	22248	Mm.284811	NM_011676	ENSMUSG00000002058	Unc119	D11Bhm52|HRG4|MRG4|Rg4|Rtg4|Unc119h	unc-119 homolog (C. elegans)	protein-coding
common_peak1-18480-14-15--0.100783839642355-0.301029995663982	chr8	84856804	84857541	+	0	NA	intron (NM_008357, intron 7 of 7)	(TA)n|Simple_repeat|Simple_repeat	69313	NM_001254747	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak1-13172-52-50-0.435834648294204-0.962598551638154	chr19	12009880	12011233	+	0	NA	intron (NM_172635, intron 14 of 18)	RLTR22_Mus|LTR|ERVK	12338	NR_105960	102465601		NR_105960		Mir6994	mmu-mir-6994	microRNA mir-6994	ncRNA
common_peak1-10911-26-12-1.22745937401737-2.03163221100073	chr15	5107719	5108729	+	0	NA	intron (NM_001013367, intron 1 of 8)	Lx5|LINE|L1	14363	NM_001013367	105787	Mm.207004	NM_001013367	ENSMUSG00000050697	Prkaa1	AI194361|AI450832|AL024255|AMPKalpha1|C130083N04Rik	protein kinase, AMP-activated, alpha 1 catalytic subunit	protein-coding
common_peak1-13972-7-15--1.20090916970181-0.947446088118041	chr2	93849298	93849837	+	0	NA	intron (NM_026944, intron 1 of 9)	L1MA7|LINE|L1	1320	NM_026944	69113	Mm.272498	NM_026944	ENSMUSG00000040174	Alkbh3	1700108H04Rik|1810020C19Rik|Abh3|mABH3	alkB, alkylation repair homolog 3 (E. coli)	protein-coding
unique_peak1-5503-10-6-0.549060422951165-1.21398586181642	chr5	135975959	135976479	+	0	NA	intron (NM_146001, intron 1 of 30)	PB1D9|SINE|Alu	44773	NM_146001	215114	Mm.280805	NM_146001	ENSMUSG00000039959	Hip1	2610109B09Rik|A930014B11Rik|E130315I21Rik|mKIAA4113	huntingtin interacting protein 1	protein-coding
common_peak2-21936-85-61-1.00120693773778-5.05421833471696	chr12	28635058	28636162	+	0	NA	Intergenic	Intergenic	597592	NM_001177964	68511	Mm.310284	NM_001177964		Dcdc2c	1110015M06Rik	doublecortin domain containing 2C	protein-coding
common_peak2-24781-11-6-0.701338662194009-1.32595962126035	chr17	62689672	62690105	+	0	NA	Intergenic	Intergenic	540778	NM_207654	13640	Mm.7978	NM_010109		Efna5	AL-1|AV158822|EFL-5|Ephrin-A5|Epl7|LERK-7|RAGS	ephrin A5	protein-coding
unique_peak1-7330-6-2-0.980435609659146-1.26211192963361	chr9	123214393	123214816	+	0	NA	Intergenic	L2c|LINE|L2	-44697	NM_001002267	72309	Mm.8569	NM_001002267	ENSMUSG00000054871	Tmem158	2310037P21Rik|Ris1	transmembrane protein 158	protein-coding
common_peak2-28132-14-33--1.18824668089269-1.80321929531239	chr4	97751421	97752357	+	0	NA	intron (NM_010905, intron 10 of 10)	intron (NM_010905, intron 10 of 10)	298067	NM_053157	94043	Mm.331719	NM_053157	ENSMUSG00000028563	Tm2d1	2310026L18Rik|AA990549|Bbp	TM2 domain containing 1	protein-coding
unique_peak1-1643-14-1-2.89921616035764-3.91338994363176	chr13	52007428	52008130	+	0	NA	Intergenic	Intergenic	65735	NM_011817	23882	Mm.281298	NM_011817	ENSMUSG00000021453	Gadd45g	AI327420|C86281|CR6|DDIT2|OIG37	growth arrest and DNA-damage-inducible 45 gamma	protein-coding
common_peak1-17431-27-35--0.178379050547076-0.330208782692001	chr7	15945694	15946733	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-27987	NM_145708	246792	Mm.26391	NM_145708	ENSMUSG00000074369	Obox2	-	oocyte specific homeobox 2	protein-coding
common_peak1-18494-9-8-0.0196884049619079-1.03275496310833	chr8	85119432	85119928	+	0	NA	Intergenic	L1Md_F2|LINE|L1	178345	NM_145600	30932	Mm.269248	NM_145600	ENSMUSG00000031711	Zfp330	BC008086|Noa36|Znf330	zinc finger protein 330	protein-coding
common_peak2-21203-21-44--0.922363831063439-1.59745120326141	chr11	61174356	61175041	+	0	NA	intron (NM_026183, intron 10 of 16)	intron (NM_026183, intron 10 of 16)	16879	NM_026183	67473	Mm.100741	NM_026183	ENSMUSG00000010122	Slc47a1	1300013J15Rik|AI036982|MATE1|mMATE1	solute carrier family 47, member 1	protein-coding
unique_peak1-6035-8-2-1.42025991722641-1.65811743852845	chr6	114917411	114917922	+	0	NA	Intergenic	Intergenic	-45896	NM_177683	232334	Mm.268357	NM_177683		Vgll4	BC048841|VGL-4	vestigial like 4 (Drosophila)	protein-coding
unique_peak1-7130-8-0-3.00522241794757-2.70926996097583	chr9	49988162	49988718	+	0	NA	Intergenic	Intergenic	-314190	NM_029639	76509	Mm.29959	NM_029639	ENSMUSG00000032068	Plet1	0610037B23Rik|1600029D21Rik|AA407923|AU043048	placenta expressed transcript 1	protein-coding
common_peak2-27183-14-16--0.188246680892695-0.308035960714963	chr3	36343240	36343976	+	0	NA	Intergenic	Intergenic	30838	NR_105976	102466786		NR_105976	miRBase:MI0022858	Mir7009	mmu-mir-7009	microRNA mir-7009	ncRNA
unique_peak2-38169-7-11--0.785871670422967-1.21681515183528	chr6	88971294	88971866	+	0	NA	Intergenic	Intergenic	-74529	NM_175017	232217	Mm.281744	NM_175017	ENSMUSG00000055403	4933427D06Rik	-	RIKEN cDNA 4933427D06 gene	protein-coding
unique_peak1-6785-7-8--0.370834171144123-1.00793137938329	chr8	67494817	67495308	+	0	NA	Intergenic	ID_B1|SINE|B4	16481	NM_001033429	333307	Mm.334557	NM_001033429	ENSMUSG00000071089	Trim75	Gm794	tripartite motif-containing 75	protein-coding
common_peak1-13350-87-49-1.35178091600644-8.23455511847319	chr19	44387583	44390424	+	0	NA	Intergenic	Intergenic	11342	NR_039574	100628619		NR_039574		Mir5114	mmu-mir-5114|mu-mir-5114	microRNA 5114	ncRNA
common_peak1-11603-22-12-0.946844386946312-1.31435121412491	chr16	17733885	17734800	+	0	NA	Intergenic	CpG	-11302	NM_001040683	94112	Mm.208970	NM_033609	ENSMUSG00000012114	Med15	A230074L19Rik|AW536074|Pcqap|mPcqap	mediator complex subunit 15	protein-coding
common_peak1-18450-25-54--0.919509808179554-1.96184293807029	chr8	83607963	83608998	+	0	NA	Intergenic	Intergenic	-69675	NM_027554	74841	Mm.246018	NM_027554	ENSMUSG00000038250	Usp38	4631402N15Rik|4833420O05Rik|AA536967|AU044701|AW544820|mKIAA1891	ubiquitin specific peptidase 38	protein-coding
common_peak1-15667-35-39-0.109442163575141-0.343417008601348	chr4	136449776	136451363	+	0	NA	Intergenic	Intergenic	-1740	NM_007574	12262	Mm.439732	NM_007574	ENSMUSG00000036896	C1qc	AI385742|C1qg|Ciqc	complement component 1, q subcomponent, C chain	protein-coding
common_peak2-21308-144-218-0.0948424768412517-0.424041740815944	chr11	74723037	74724947	+	0	NA	intron (NM_013761, intron 5 of 8)	intron (NM_013761, intron 5 of 8)	5044	NR_028562	100217469		NR_028562		Snord91a	MBII-296	small nucleolar RNA, C/D box 91A	snoRNA
common_peak1-12300-15-22--0.511397205501357-0.50761186003982	chr17	46593033	46593838	+	0	NA	intron (NM_001162864, intron 13 of 14)	intron (NM_001162864, intron 13 of 14)	-18009	NM_144856	108114	Mm.387538	NM_144856	ENSMUSG00000067144	Slc22a7	NLT|OAT2	solute carrier family 22 (organic anion transporter), member 7	protein-coding
unique_peak1-5936-7-0-2.79909083029819-2.40823996531185	chr6	90495499	90496024	+	0	NA	Intergenic	CT-rich|Low_complexity|Low_complexity	-5081	NM_027406	107747	Mm.30035	NM_027406	ENSMUSG00000030088	Aldh1l1	1810048F20Rik|FDH|Fthfd|Neut2	aldehyde dehydrogenase 1 family, member L1	protein-coding
common_peak1-11458-18-23--0.272043349492805-0.34651636097721	chr15	101366485	101367172	+	0	NA	intron (NM_016879, intron 2 of 3)	intron (NM_016879, intron 2 of 3)	-3577	NM_008474	16680	Mm.25292	NM_008474	ENSMUSG00000044294	Krt84	AV235125|HRb-1|Krt2-16|Krt2-3	keratin 84	protein-coding
common_peak2-28589-9-9--0.132314688483142-1.03275496310833	chr5	17571334	17571820	+	0	NA	Intergenic	L1_Mur2|LINE|L1	103189	NM_001081143	242851	Mm.332230	NM_001081143	ENSMUSG00000028777	Gnat3	Ggust|Gtn	guanine nucleotide binding protein, alpha transducing 3	protein-coding
common_peak1-7732-25-11-1.27688740462395-2.12469164491494	chr1	88575589	88576572	+	0	NA	Intergenic	Lx7|LINE|L1	-8932	NM_010933	18159	Mm.12802	NM_010933	ENSMUSG00000026241	Nppc	CNP|lbab	natriuretic peptide type C	protein-coding
unique_peak2-36018-9-8-0.0196884049619079-1.03275496310833	chr19	41838426	41838914	+	0	NA	Intergenic	MER33|DNA|MER1_type	17219	NR_040320	100502871	Mm.394485	NR_040320		Gm19424	-	predicted gene, 19424	ncRNA
common_peak2-29083-45-43-0.400926406707574-0.786568022251753	chr5	121204353	121205158	+	0	NA	intron (NM_145226, intron 14 of 15)	intron (NM_145226, intron 14 of 15)	-4898	NM_145227	246728	Mm.260926	NM_145227	ENSMUSG00000032690	Oas2	Oasl11	2'-5' oligoadenylate synthetase 2	protein-coding
common_peak2-30482-22-27--0.160070816970199-0.317737750275047	chr7	51912871	51913921	+	0	NA	exon (NM_001271540, exon 5 of 42)	exon (NM_001271540, exon 5 of 42)	7477	NM_001271538	71960	Mm.158289	NM_028021	ENSMUSG00000030739	Myh14	2400004E04Rik|II-C|NHMCII|NMHC II-C	myosin, heavy polypeptide 14	protein-coding
common_peak2-27440-15-27--0.795190171501948-0.918917574080418	chr3	89912486	89913467	+	0	NA	intron (NM_029937, intron 2 of 39)	B4A|SINE|B4	4922	NM_029937	77595	Mm.159949	NM_029937	ENSMUSG00000027939	Nup210l	4930548O11Rik|R26-EGFP|Tg(Gt(ROSA)26Sor-EGFP)130910Eps	nucleoporin 210-like	protein-coding
common_peak1-14554-97-135-0.0965382302419426-0.378599076654497	chr3	35931874	35933568	+	0	NA	intron (NM_178418, intron 4 of 11)	intron (NM_178418, intron 4 of 11)	19748	NM_178418	241943	Mm.269018	NM_178418	ENSMUSG00000047696	Ccdc144b	-	coiled-coil domain containing 144B	protein-coding
common_peak1-16215-72-114--0.176906238072057-0.445869382556193	chr5	96995964	96998260	+	0	NA	intron (NM_175473, intron 11 of 73)	intron (NM_175473, intron 11 of 73)	194138	NM_175473	231470	Mm.291120	NM_175473	ENSMUSG00000034687	Fras1	E130113P14Rik|bl|mKIAA1500	Fraser syndrome 1 homolog (human)	protein-coding
common_peak1-11073-37-58--0.356649977876023-0.602366141647657	chr15	58415241	58416302	+	0	NA	Intergenic	GA-rich|Low_complexity|Low_complexity	168748	NM_145959	210998	Mm.3224	NM_145959	ENSMUSG00000037119	D15Ertd621e	AV220772|BC033609|Fam91a1|SKIN|mKIAA0493	DNA segment, Chr 15, ERATO Doi 621, expressed	protein-coding
common_peak2-25629-16-16-0.0308008010177225-0.307611222530525	chr19	9075628	9076367	+	0	NA	intron (NR_104460, intron 4 of 6)	intron (NR_104460, intron 4 of 6)	12223	NM_001286518	66395	Mm.203866	NM_009643	ENSMUSG00000069833	Ahnak	DY6	AHNAK nucleoprotein (desmoyokin)	protein-coding
unique_peak1-914-16-0-4.11826364226806-5.41853992195166	chr11	48801957	48802579	+	0	NA	intron (NM_001145164, intron 1 of 1)	intron (NM_001145164, intron 1 of 1)	3480	NM_011579	21822	Mm.15793	NM_011579	ENSMUSG00000078922	Tgtp1	Gtp2|Irgb6|Mg21|Tgtp	T cell specific GTPase 1	protein-coding
common_peak2-29714-17-9-0.896368243317676-1.09394599973099	chr6	83506985	83507520	+	0	NA	intron (NM_024239, intron 6 of 9)	B4|SINE|B4	-10781	NR_078345	100861870	Mm.461230	NR_078345		Gm21284	-	predicted gene, 21284	ncRNA
common_peak1-16175-73-66-0.626305815967449-2.07438007356203	chr5	90875138	90877080	+	0	NA	Intergenic	Intergenic	-13806	NM_009654	11657	Mm.16773	NM_009654	ENSMUSG00000029368	Alb	Alb-1|Alb1	albumin	protein-coding
common_peak1-10334-11-7-0.508693584251613-1.21681515183528	chr13	74463134	74463568	+	0	NA	intron (NM_023281, intron 13 of 14)	L1_Mus1|LINE|L1	-8577	NM_011051	18570	Mm.24254	NM_011051	ENSMUSG00000021576	Pdcd6	AV299538|Alg2|MA-3|PS2|alg-2	programmed cell death 6	protein-coding
common_peak2-25646-15-24--0.631691439219068-0.650819692678081	chr19	9982625	9983155	+	0	NA	Intergenic	RLTR12A|LTR|ERVK	-8867	NM_016692	16319	Mm.29755	NM_016692	ENSMUSG00000024660	Incenp	2700067E22Rik|AU019509|C130081E20|C77457	inner centromere protein	protein-coding
common_peak1-10209-145-183-0.358095777072771-1.76070467760818	chr13	48869761	48871844	+	0	NA	Intergenic	L1MB3|LINE|L1	95452	NM_011078	18676	Mm.486213	NM_011078	ENSMUSG00000038025	Phf2	GRC5	PHD finger protein 2	protein-coding
common_peak2-28644-11-9-0.186765489364251-0.344532117358383	chr5	30231939	30232423	+	0	NA	intron (NR_105781, intron 1 of 2)	ORR1A1-int|LTR|MaLR	-107520	NM_031168	16193	Mm.1019	NM_031168	ENSMUSG00000025746	Il6	Il-6	interleukin 6	protein-coding
common_peak1-19237-8-16--1.08224042330277-0.891319708951328	chr9	108479743	108480234	+	0	NA	intron (NM_031392, intron 1 of 5)	intron (NM_031392, intron 1 of 5)	1013	NM_031392	83669	Mm.335454	NM_031392	ENSMUSG00000066357	Wdr6	mWDR6	WD repeat domain 6	protein-coding
common_peak1-15978-9-9--0.132314688483142-1.03275496310833	chr5	32033083	32033591	+	0	NA	intron (NM_181279, intron 4 of 13)	intron (NM_181279, intron 4 of 13)	32914	NM_181282	107976	Mm.482126	NM_144541	ENSMUSG00000052139	Bre	6030405P19Rik|AI429776|B830038C02Rik	brain and reproductive organ-expressed protein	protein-coding
common_peak2-25229-33-54--0.450022150999131-0.755494033265326	chr18	62548165	62548844	+	0	NA	intron (NM_008313, intron 2 of 6)	L1_Mus4|LINE|L1	64646	NM_008313	15562	Mm.20440	NM_008313	ENSMUSG00000026322	Htr4	5-HT-4|5-HT4|5-HT<4L>|5HTR4	5 hydroxytryptamine (serotonin) receptor 4	protein-coding
unique_peak1-2992-8-2-1.42025991722641-1.65811743852845	chr17	80148238	80148705	+	0	NA	Intergenic	Intergenic	-34090	NM_009994	13078	Mm.214016	NM_009994	ENSMUSG00000024087	Cyp1b1	CP1B|P4501b1	cytochrome P450, family 1, subfamily b, polypeptide 1	protein-coding
common_peak1-7588-22-40--0.710267899530679-1.05951140195658	chr1	54925556	54926757	+	0	NA	intron (NM_001081433, intron 1 of 27)	intron (NM_001081433, intron 1 of 27)	57075	NM_001081433	329154	Mm.397910	NM_001081433	ENSMUSG00000052331	Ankrd44	4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B	ankyrin repeat domain 44	protein-coding
common_peak1-8637-7-14--1.10779976531033-0.817533494790411	chr10	121822851	121823306	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-62477	NM_016847	54140	Mm.4351	NM_016847	ENSMUSG00000020123	Avpr1a	AVPR|Avpr1|V1a|V1aR	arginine vasopressin receptor 1A	protein-coding
common_peak1-11473-119-91-1.01487596507303-7.52161708948649	chr15	102015388	102018238	+	0	NA	intron (NM_144942, intron 7 of 14)	intron (NM_144942, intron 7 of 14)	2661	NM_144942	246277	Mm.296382	NM_144942	ENSMUSG00000023044	Csad	Csd	cysteine sulfinic acid decarboxylase	protein-coding
common_peak1-10170-20-18-0.240147271147608-0.388034239052786	chr13	38634643	38635641	+	0	NA	Intergenic	Intergenic	-14449	NM_001289598	105245	Mm.28622	NM_145367	ENSMUSG00000038991	Txndc5	AL022641|ERp46|PC-TRP	thioredoxin domain containing 5	protein-coding
common_peak2-31965-17-33--0.869166503045301-1.12969433525548	chr9	66945910	66946942	+	0	NA	Intergenic	Intergenic	-34942	NR_045748	100502636	Mm.412607	NR_045748		Gm19299	-	predicted gene, 19299	ncRNA
common_peak2-30938-11-17--0.661231417190699-0.58239619684445	chr8	3587734	3588382	+	0	NA	intron (NM_027171, intron 1 of 16)	CpG	608	NM_001163749	69697	Mm.390010	NM_027171	ENSMUSG00000044433	Camsap3	2310057J16Rik|Kiaa1543|Nezha	calmodulin regulated spectrin-associated protein family, member 3	protein-coding
common_peak2-27949-69-88-0.119409016292335-0.396142811983599	chr4	33030701	33032156	+	0	NA	intron (NM_001012451, intron 1 of 15)	intron (NM_001012451, intron 1 of 15)	6373	NM_001012451	140577	Mm.214766	NM_080471	ENSMUSG00000040183	Ankrd6	-	ankyrin repeat domain 6	protein-coding
unique_peak2-35291-10-18--0.891512168434816-0.804350088532826	chr17	7964074	7965051	+	0	NA	exon (NM_001081416, exon 8 of 20)	exon (NM_001081416, exon 8 of 20)	33277	NM_001081416	68655	Mm.379161	NM_001081416	ENSMUSG00000071984	Fndc1	1110027O12Rik|1110051A18Rik|mKIAA1866	fibronectin type III domain containing 1	protein-coding
common_peak1-11149-65-89-0.000312843147452391-0.302243115052196	chr15	74708895	74709936	+	0	NA	3' UTR (NM_025929, exon 3 of 3)	3' UTR (NM_025929, exon 3 of 3)	2719	NM_025929	67038	Mm.154566	NM_025929	ENSMUSG00000063522	2010109I03Rik	-	RIKEN cDNA 2010109I03 gene	protein-coding
unique_peak1-2849-16-6-1.31090872021046-1.49151883326344	chr17	31747462	31748285	+	0	NA	Intergenic	B2_Mm2|SINE|B2	26277	NM_144855	12411	Mm.206417	NM_144855	ENSMUSG00000024039	Cbs	AI047524|AI303044|HIP4	cystathionine beta-synthase	protein-coding
common_peak2-20332-21-26--0.185398236897233-0.318406410381916	chr10	3973007	3973921	+	0	NA	Intergenic	RLTR18B|LTR|ERVK	-415524	NM_001039652	18390	Mm.439715	NM_011013	ENSMUSG00000000766	Oprm1	M-OR-1|MOP-R|MOR-1|MOR-1O|Oprm|mor|muOR	opioid receptor, mu 1	protein-coding
common_peak2-30761-9-11--0.395349094316936-0.344532117358383	chr7	122101540	122102051	+	0	NA	intron (NR_040319, intron 2 of 4)	intron (NR_040319, intron 2 of 4)	7007	NR_040319	101786	Mm.395157	NR_040317		A730082K24Rik	AU044236	RIKEN cDNA A730082K24 gene	ncRNA
common_peak1-10018-103-98-0.658641125780431-3.20247763401147	chr13	6609481	6613014	+	0	NA	intron (NM_001291071, intron 8 of 21)	intron (NM_001291071, intron 8 of 21)	36770	NM_019703	56421	Mm.273874	NM_019703	ENSMUSG00000021196	Pfkp	1200015H23Rik|9330125N24Rik|ATP-PFK|PFK-C|PFK-P	phosphofructokinase, platelet	protein-coding
common_peak1-8597-10-23--1.22854715571239-1.44380006500971	chr10	111507521	111508125	+	0	NA	intron (NM_027018, intron 2 of 4)	Lx3_Mus|LINE|L1	10578	NM_027018	69286	Mm.47058	NM_027018	ENSMUSG00000020213	Glipr1l1	1700011E04Rik	GLI pathogenesis-related 1 like 1	protein-coding
common_peak1-17337-95-93-0.593326493346376-2.53599046075158	chr6	148211090	148212955	+	0	NA	intron (NM_198967, intron 12 of 19)	intron (NM_198967, intron 12 of 19)	-51126	NM_001286560	67456	Mm.59812	NM_026168	ENSMUSG00000030304	Ergic2	1200009B18Rik|4930572C01Rik|AA408438|Ptx1	ERGIC and golgi 2	protein-coding
common_peak1-10565-29-25-0.411850362474019-0.664636481544818	chr14	21051930	21052806	+	0	NA	Intergenic	Intergenic	36016	NM_029006	74571	Mm.105571	NM_029006	ENSMUSG00000023387	Kcnk16	4731413G05Rik|TALK-1|TALK1	potassium channel, subfamily K, member 16	protein-coding
common_peak2-26968-10-9-0.0344872501214071-1.05503135781948	chr2	166996475	166997118	+	0	NA	intron (NM_008420, intron 1 of 1)	intron (NM_008420, intron 1 of 1)	17522	NM_008420	16500	Mm.205341	NM_008420		Kcnb1	Kcr1-1|Kv2.1|Shab	potassium voltage gated channel, Shab-related subfamily, member 1	protein-coding
unique_peak2-39983-12-41--1.74354143769112-3.61278843657669	chrX	155215384	155216490	+	0	NA	Intergenic	L1_Mm|LINE|L1	-477777	NM_148945	110651	Mm.328476	NM_148945	ENSMUSG00000031309	Rps6ka3	C130006E23|MAPKAPK-1b|MPK-9|Rsk2|S6K-alpha3|p90RSK3|pp90RSK2	ribosomal protein S6 kinase polypeptide 3	protein-coding
unique_peak2-38409-10-14--0.550475250599749-0.446472590016315	chr7	22774649	22775291	+	0	NA	Intergenic	Intergenic	-4636	NM_001166848	100043596	Mm.484977	NM_001166848	ENSMUSG00000094208	Vmn1r130	Gm4542	vomeronasal 1 receptor 130	protein-coding
common_peak1-13077-72-51-0.968144094731226-4.06412691787081	chr19	6840000	6842756	+	0	NA	Intergenic	Intergenic	63056	NR_039555	100628576		NR_039555		Mir5046	mmu-mir-5046|mu-mir-5046	microRNA 5046	ncRNA
common_peak2-32228-18-24--0.330937038546373-0.380101753845076	chr9	123136604	123137267	+	0	NA	Intergenic	Intergenic	-11779	NM_133974	109332	Mm.27519	NM_133974	ENSMUSG00000035498	Cdcp1	9030022E12Rik|AA409659|E030027H19Rik	CUB domain containing protein 1	protein-coding
common_peak2-31602-12-14--0.25811461052088-0.309074325783021	chr8	122280690	122281399	+	0	NA	intron (NM_026922, intron 26 of 26)	intron (NM_026922, intron 26 of 26)	21272	NM_028883	74347	Mm.358759	NM_028883	ENSMUSG00000034105	Tldc1	4632415K11Rik|Kiaa1609	TBC/LysM associated domain containing 1	protein-coding
common_peak1-17130-14-9-0.577288065470282-0.630231561310125	chr6	115519188	115519909	+	0	NA	intron (NM_199033, intron 8 of 11)	intron (NM_199033, intron 8 of 11)	23046	NM_001101431	70291	Mm.133694	NM_001101431		Mkrn2os	2510049J12Rik	makorin, ring finger protein 2, opposite strand	protein-coding
common_peak1-10596-21-23--0.0154732354549205-0.305650498375555	chr14	31336498	31337060	+	0	NA	3' UTR (NM_133761, exon 10 of 10)	3' UTR (NM_133761, exon 10 of 10)	-25538	NM_009388	21881	Mm.290692	NM_009388	ENSMUSG00000021957	Tkt	p68	transketolase	protein-coding
common_peak1-9035-51-48-0.460213981487365-0.985819031340023	chr11	62538454	62539537	+	0	NA	intron (NM_133208, intron 2 of 4)	intron (NM_133208, intron 2 of 4)	3600	NM_133208	170740	Mm.339982	NM_133208		Zfp287	B230333C16Rik|SKAT-2|Skat2|Znf287|mszf16|mszf74	zinc finger protein 287	protein-coding
unique_peak2-35625-6-11--1.01956439034085-1.32595962126035	chr17	87265259	87265819	+	0	NA	Intergenic	Intergenic	-51149	NM_001277980	78469	Mm.67234	NM_030104	ENSMUSG00000037689	Tmem247	1700090G07Rik	transmembrane protein 247	protein-coding
common_peak1-13126-30-16-1.08221256824153-2.01522565129858	chr19	9039300	9040549	+	0	NA	exon (NM_197993, exon 9 of 9)	exon (NM_197993, exon 9 of 9)	-1607	NM_026007	67160	Mm.247762	NM_026007	ENSMUSG00000071644	Eef1g	2610301D06Rik|AA407312|EF1G	eukaryotic translation elongation factor 1 gamma	protein-coding
unique_peak2-36552-4-5--0.608423014574403-0.909929411522249	chr2	167776030	167776444	+	0	NA	intron (NM_011201, intron 1 of 8)	intron (NM_011201, intron 1 of 8)	18410	NM_011201	19246	Mm.277916	NM_011201	ENSMUSG00000027540	Ptpn1	PTP-1B|PTP-HA2|PTP1B	protein tyrosine phosphatase, non-receptor type 1	protein-coding
common_peak2-31397-72-108--0.0996005119046082-0.338260303283152	chr8	88361279	88362568	+	0	NA	intron (NM_028007, intron 2 of 17)	ORR1B1|LTR|MaLR	2925	NM_028007	71927	Mm.61018	NM_028007	ENSMUSG00000031703	Itfg1	2310047C21Rik|AI314457|Cda08|D8Wsu49e	integrin alpha FG-GAP repeat containing 1	protein-coding
common_peak2-21393-9-12--0.510826311736872-0.394412252720706	chr11	80183848	80184388	+	0	NA	intron (NM_027472, intron 5 of 9)	intron (NM_027472, intron 5 of 9)	7399	NM_027472	70591	Mm.86860	NM_027472	ENSMUSG00000057181	5730455P16Rik	-	RIKEN cDNA 5730455P16 gene	protein-coding
unique_peak2-37630-3-7--1.41398308995928-1.23214870625617	chr5	72150509	72150876	+	0	NA	intron (NM_008069, intron 3 of 8)	intron (NM_008069, intron 3 of 8)	59437	NM_008069	14400	Mm.38567	NM_008069		Gabrb1	AW061132|B230208N19Rik|Gabrb-1	gamma-aminobutyric acid (GABA) A receptor, subunit beta 1	protein-coding
common_peak1-11563-16-20--0.274053780510699-0.353907621462756	chr16	11254281	11254975	+	0	NA	promoter-TSS (NM_146066)	promoter-TSS (NM_146066)	-90	NR_035466	100316833		NR_035466	miRBase:MI0009934	Mir1945	mmu-mir-1945	microRNA 1945	ncRNA
unique_peak2-36933-12-28--1.20920501003993-1.52081014994907	chr3	103102573	103103417	+	0	NA	intron (NM_001079830, intron 1 of 18)	B4A|SINE|B4	19779	NM_001079830	94093	Mm.195036	NM_053170	ENSMUSG00000033014	Trim33	8030451N04Rik|AI413936|Ecto|Tif1g	tripartite motif-containing 33	protein-coding
common_peak2-27908-11-10-0.0492619656143161-0.31137425193576	chr4	6270756	6271143	+	0	NA	Intergenic	Intergenic	-21878	NM_016807	53378	Mm.247473	NM_016807	ENSMUSG00000028249	Sdcbp	MDA-9|Sycl|syntenin-1	syndecan binding protein	protein-coding
common_peak2-23442-10-10--0.103016273628528-0.301029995663987	chr15	63341016	63341625	+	0	NA	Intergenic	MTE2b-int|LTR|MaLR	-30157	NR_045279	432958	Mm.255105	NR_045279		Gm20740	-	predicted gene, 20740	ncRNA
common_peak1-10440-16-20--0.274053780510699-0.353907621462756	chr13	103977957	103978782	+	0	NA	intron (NM_175171, intron 1 of 28)	intron (NM_175171, intron 1 of 28)	146203	NM_175171	328329	Mm.202606	NM_175171	ENSMUSG00000034751	Mast4	4930420O11Rik|AI642422|mKIAA0303	microtubule associated serine/threonine kinase family member 4	protein-coding
unique_peak2-39085-7-9--0.522837264589173-1.05908390183068	chr8	75092888	75093353	+	0	NA	intron (NM_172396, intron 3 of 4)	intron (NM_172396, intron 3 of 4)	1827	NM_172396	66818	Mm.22565	NM_172396	ENSMUSG00000044600	Smim7	9130011J15Rik	small integral membrane protein 7	protein-coding
unique_peak2-34315-5-9--1.02630843089322-1.21398586181642	chr13	95039311	95039748	+	0	NA	intron (NM_029153, intron 1 of 8)	intron (NM_029153, intron 1 of 8)	15707	NM_029153	107767	Mm.201455	NM_029153	ENSMUSG00000021687	Scamp1	4930505M11Rik|AI415563|AW122395	secretory carrier membrane protein 1	protein-coding
common_peak1-12882-22-8-1.47735910364509-2.29727994934156	chr18	78114896	78115981	+	0	NA	intron (NM_013831, intron 12 of 14)	B3A|SINE|B2	-19768	NM_001195633	100502841	Mm.297782	NM_001195633	ENSMUSG00000039840	Epg5	4732475F16|5430411K18Rik|AI661957|AW456499|mKIAA1632	ectopic P-granules autophagy protein 5 homolog (C. elegans)	protein-coding
common_peak1-11610-14-12-0.198776442216552-0.373562084705529	chr16	17938721	17939519	+	0	NA	Intergenic	Intergenic	-10808	NM_153150	13358	Mm.229291	NM_153150	ENSMUSG00000003528	Slc25a1	1300019P08Rik|2610100G11Rik|AI194714|Ctp|Dgsj|Slc20a3	solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1	protein-coding
common_peak2-29142-9-6-0.382258484346616-1.11707584880836	chr5	125394864	125395178	+	0	NA	Intergenic	Intergenic	51946	NM_001081750	269704	Mm.138617	NM_001081750	ENSMUSG00000079215	Zfp664	AW060232|D930038J03Rik|ZFOC1|Znf664	zinc finger protein 664	protein-coding
common_peak2-20499-10-9-0.0344872501214071-1.05503135781948	chr10	58497870	58498262	+	0	NA	intron (NM_172788, intron 3 of 9)	(CCCA)n|Simple_repeat|Simple_repeat	186529	NM_001024911	103080	Mm.346842	NM_001024910	ENSMUSG00000019917	Sept10	4921515A04Rik|9430099J10Rik|AA408298|AI874685	septin 10	protein-coding
common_peak1-11039-12-7-0.648775985087639-0.697979855752659	chr15	44364545	44365157	+	0	NA	intron (NM_138674, intron 39 of 76)	intron (NM_138674, intron 39 of 76)	75752	NM_138674	192190	Mm.211494	NM_138674	ENSMUSG00000038725	Pkhd1l1	AB055648|PKHDL1	polycystic kidney and hepatic disease 1-like 1	protein-coding
common_peak2-29403-25-31--0.138150094654894-0.315509160416417	chr6	100498180	100499472	+	0	NA	Intergenic	RLTR20B3|LTR|ERVK	21432	NR_040525	73395	Mm.69413	NR_040525		1700049E22Rik	-	RIKEN cDNA 1700049E22 gene	ncRNA
common_peak2-22785-33-40--0.026214442092555-0.301029995663988	chr14	121797338	121798780	+	0	NA	Intergenic	B3|SINE|B2	-19607	NM_145465	223255	Mm.390756	NM_145465	ENSMUSG00000063410	Stk24	1810013H02Rik|C76483|MST-3|Mst3|STE20	serine/threonine kinase 24	protein-coding
common_peak2-22092-13-5-1.19350952991661-1.95509489018123	chr12	79905057	79905418	+	0	NA	intron (NM_019579, intron 3 of 14)	B3A|SINE|B2	55303	NM_019579	56217	Mm.425777	NM_019579	ENSMUSG00000021112	Mpp5	3830420B02Rik|AI255216|AI644496|Pals1	membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)	protein-coding
common_peak2-20513-7-5-0.214128329577033-1.01466476204226	chr10	59924430	59924746	+	0	NA	intron (NR_045556, intron 14 of 68)	intron (NR_045556, intron 14 of 68)	62114	NM_001164374	100302688	Mm.444135	NM_001164374	ENSMUSG00000090439	Gm17455	-	predicted gene, 17455	protein-coding
common_peak1-13973-40-57--0.199005312376474-0.373449689110125	chr2	94157151	94158239	+	0	NA	intron (NM_183106, intron 22 of 24)	L1MEg|LINE|L1	-56139	NR_030431	735259		NR_030431	miRBase:MI0004295	Mir670	Mirn670|mmu-mir-670	microRNA 670	ncRNA
common_peak2-23885-63-91--0.0852493649864234-0.320550491908803	chr16	44138221	44140641	+	0	NA	promoter-TSS (NM_007508)	promoter-TSS (NM_007508)	-299	NM_007508	11964	Mm.217787	NM_007508	ENSMUSG00000052459	Atp6v1a	AI647066|Atp6a1|Atp6a2|Atp6v1a1|VA68|VPP2	ATPase, H+ transporting, lysosomal V1 subunit A	protein-coding
common_peak1-8650-29-85--1.31397467408699-4.96587018760131	chr10	127266367	127267154	+	0	NA	intron (NR_037604, intron 1 of 3)	IAPLTR2a|LTR|ERVK	5488	NR_037604	380674	Mm.384871	NM_199313		Rdh18-ps	Rdh18	retinol dehydrogenase 18, pseudogene	pseudo
common_peak1-14596-8-10--0.454209200689727-1.078512453669	chr3	51341604	51342071	+	0	NA	intron (NM_080793, intron 3 of 7)	B1F2|SINE|Alu	-21842	NR_033624	100039684	Mm.387178	NR_033624	ENSMUSG00000097885	5031434O11Rik	AI481280|Gm2370	RIKEN cDNA 5031434O11 gene	ncRNA
unique_peak1-703-9-3-1.18961340640422-1.57096726280955	chr10	81430572	81431085	+	0	NA	Intergenic	IAPLTR1a_Mm|LTR|ERVK	-37603	NM_199062	331188	Mm.351497	NM_199062		Zfp781	A130081B01	zinc finger protein 781	protein-coding
common_peak2-23714-47-88--0.54089200619985-1.36934044104	chr15	89428936	89430299	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-7263	NM_026817	68708	Mm.23258	NM_026817	ENSMUSG00000022621	Rabl2	1110031N17Rik|AW549303|Rabl2a	RAB, member RAS oncogene family-like 2	protein-coding
common_peak1-18058-14-19--0.422711934529718-0.403453972741636	chr7	145221389	145222163	+	0	NA	Intergenic	Intergenic	367637	NM_183289	70571	Mm.334297	NM_183289	ENSMUSG00000091002	Tcerg1l	5730476P14Rik	transcription elongation regulator 1-like	protein-coding
common_peak2-28113-19-33--0.684775514588653-0.884951936461256	chr4	89049409	89050210	+	0	NA	Intergenic	Intergenic	-92868	NM_007670	12579	Mm.423094	NM_007670	ENSMUSG00000073802	Cdkn2b	AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b	cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)	protein-coding
common_peak1-14472-30-46--0.384913442185765-0.566504029620424	chr3	101923770	101924878	+	0	NA	intron (NM_009814, intron 5 of 10)	intron (NM_009814, intron 5 of 10)	33946	NM_009814	12373	Mm.15343	NM_009814	ENSMUSG00000027861	Casq2	AA033488|AW146219|ESTM52|cCSQ	calsequestrin 2	protein-coding
common_peak1-9413-17-14-0.311405742596519-0.466170754204149	chr11	101059848	101060819	+	0	NA	intron (NM_007970, intron 15 of 20)	B3|SINE|B2	22902	NM_016782	53321	Mm.474527	NM_016782	ENSMUSG00000017167	Cntnap1	AI841080|Caspr|NCP1|Nrxn4|p190|shm	contactin associated protein-like 1	protein-coding
common_peak2-22944-9-7-0.18961340640422-1.05908390183068	chr14	48279120	48279552	+	0	NA	intron (NM_001293636, intron 2 of 39)	intron (NM_001293636, intron 2 of 39)	-4095	NM_008477	16709	Mm.3110	NM_008477	ENSMUSG00000021843	Ktn1	-	kinectin 1	protein-coding
unique_peak1-7111-11-3-1.50869358425161-1.95434855131066	chr9	43874047	43874612	+	0	NA	promoter-TSS (NM_198092)	promoter-TSS (NM_198092)	-775	NM_198092	53376	Mm.272770	NM_016808	ENSMUSG00000032010	Usp2	B930035K21Rik|Ubp41	ubiquitin specific peptidase 2	protein-coding
common_peak2-26154-6-6--0.241956811677302-0.947717972411649	chr2	16984087	16984483	+	0	NA	Intergenic	RLTR45-int|LTR|ERVK	-48932	NR_040632	75069	Mm.50378	NR_040632		4930515L03Rik	-	RIKEN cDNA 4930515L03 gene	ncRNA
common_peak1-18889-23-28--0.136213490618491-0.317118655902079	chr9	35116632	35117728	+	0	NA	Intergenic	Intergenic	28490	NR_040715	71133	Mm.158577	NR_040715		4933422A05Rik	-	RIKEN cDNA 4933422A05 gene	ncRNA
common_peak1-15238-14-5-1.31425365963649-1.4372489031793	chr4	7942073	7942733	+	0	NA	Intergenic	L1_Mur3|LINE|L1	223785	NM_007592	12319	Mm.119320	NM_007592		Car8	AW546993|Ca8|Cals|Cals1|Carp|wdl	carbonic anhydrase 8	protein-coding
unique_peak1-7043-11-2-1.92373108353046-2.32232533660526	chr8	128268187	128268696	+	0	NA	intron (NM_025636, intron 3 of 4)	intron (NM_025636, intron 3 of 4)	10338	NM_025636	66566	Mm.25296	NM_025636	ENSMUSG00000031851	Ntpcr	2310079N02Rik|AI449709	nucleoside-triphosphatase, cancer-related	protein-coding
common_peak1-16279-17-52--1.50962411635816-3.7633092158656	chr5	110107722	110108520	+	0	NA	Intergenic	MurSatRep1|Unknown|Unknown	-120109	NM_001164735	57914	Mm.35771	NM_016715	ENSMUSG00000033467	Crlf2	CRLM2|Ly114|Tpte2|Tslpr	cytokine receptor-like factor 2	protein-coding
common_peak1-14548-10-18--0.891512168434816-0.804350088532826	chr3	32616193	32616685	+	0	NA	intron (NM_019673, intron 5 of 13)	intron (NM_019673, intron 5 of 13)	8971	NM_019673	56456	Mm.41077	NM_019673	ENSMUSG00000027671	Actl6a	2810432C06Rik|AI851094|ARP4|Actl6|Baf53a|C79802	actin-like 6A	protein-coding
unique_peak1-2743-8-3-1.00522241794757-1.39487600375387	chr17	28344152	28344637	+	0	NA	promoter-TSS (NM_027185)	promoter-TSS (NM_027185)	-329	NM_027185	23853	Mm.204731	NM_027185	ENSMUSG00000002257	Def6	2410003F05Rik|6430538D02Rik|AV094905|Ibp|Slat|Slat2|Slat6	differentially expressed in FDCP 6	protein-coding
common_peak1-17385-55-74--0.0241988193431784-0.301029995664056	chr7	133708842	133709870	+	0	NA	intron (NM_146200, intron 2 of 20)	intron (NM_146200, intron 2 of 20)	524	NM_146200	56347	Mm.22776	NM_146200	ENSMUSG00000030738	Eif3c	110kDa|3230401O13Rik|Eif3s8|NIPIL(A3)|NipilA3|Xs|Xsl	eukaryotic translation initiation factor 3, subunit C	protein-coding
common_peak1-16536-16-20--0.274053780510699-0.353907621462756	chr5	142960518	142961383	+	0	NA	3' UTR (NM_001289588, exon 15 of 15)	3' UTR (NM_001289588, exon 15 of 15)	21065	NM_172725	231855	Mm.78250	NM_172725	ENSMUSG00000039623	Ap5z1	C330006K01Rik	adaptor-related protein complex 5, zeta 1 subunit	protein-coding
common_peak2-22908-27-11-1.40658345017408-2.62629506227042	chr14	36919053	36919539	+	0	NA	Intergenic	Intergenic	11145	NM_175008	218921	Mm.212464	NM_175008	ENSMUSG00000096405	4930474N05Rik	-	RIKEN cDNA 4930474N05 gene	protein-coding
unique_peak1-5180-12-5-1.06381348436648-1.78669045979184	chr5	30848856	30849410	+	0	NA	promoter-TSS (NM_028483)	promoter-TSS (NM_028483)	-924	NM_028483	73259	Mm.443299	NM_028483	ENSMUSG00000053194	Cib4	1700041E20Rik	calcium and integrin binding family member 4	protein-coding
unique_peak1-112-8-0-3.00522241794757-2.70926996097583	chr1	58953482	58953999	+	0	NA	Intergenic	Intergenic	76586	NM_172406	70827	Mm.222887	NM_172406	ENSMUSG00000026028	Trak2	2900022D04Rik|4733401O11Rik|AI480836|AW046271|Als2cr3|CALS-C|GRIF-1|GRIF1|OIP98|mKIAA0549	trafficking protein, kinesin binding 2	protein-coding
common_peak2-30369-90-115-0.19632403081458-0.584971964717394	chr7	28808089	28810079	+	0	NA	Intergenic	RLTR6-int|LTR|ERV1	-9950	NM_001254951	100043772	Mm.129275	NM_001100456		Zfp850	C130069I09Rik|Gm4636	zinc finger protein 850	protein-coding
unique_peak2-37146-6-12--1.13504160776079-1.45089835786865	chr4	32518078	32518553	+	0	NA	intron (NM_001109661, intron 1 of 4)	intron (NM_001109661, intron 1 of 4)	13905	NM_001109661	12014	Mm.491223	NM_007521	ENSMUSG00000040270	Bach2	E030004N02Rik	BTB and CNC homology 2	protein-coding
common_peak1-12737-14-19--0.422711934529718-0.403453972741636	chr18	54987776	54988252	+	0	NA	Intergenic	Intergenic	161820	NM_175751	269023	Mm.192984	NM_175751	ENSMUSG00000052713	Zfp608	4932417D18Rik|D430007A19Rik|Znf608	zinc finger protein 608	protein-coding
common_peak2-24410-19-22--0.120874629395327-0.306080386793804	chr17	15396208	15396936	+	0	NA	Intergenic	Intergenic	-18825	NR_046164	328747	Mm.256835	NR_046164	ENSMUSG00000097624	Gm5091	C330048F19	predicted gene 5091	ncRNA
common_peak1-11019-29-29-0.205399485006592-0.423354874519384	chr15	38456342	38457368	+	0	NA	Intergenic	ORR1B1|LTR|MaLR	-7834	NM_018745	54375	Mm.250214	NM_018745	ENSMUSG00000037458	Azin1	1700085L02Rik|AI414949|Oazi|Oazin	antizyme inhibitor 1	protein-coding
common_peak1-15960-27-37--0.256381562548349-0.379775532323854	chr5	31179548	31180790	+	0	NA	TTS (NM_144525)	TTS (NM_144525)	8149	NM_144525	68796	Mm.205169	NM_144525		Tmem214	1110039B18Rik|4921530J21Rik|AI841294|AU018742|C76280	transmembrane protein 214	protein-coding
common_peak1-8643-11-16--0.578769256998726-0.503257505534083	chr10	123196594	123197114	+	0	NA	Intergenic	Intergenic	495722	NM_001252387	268354	Mm.51939	NM_182807	ENSMUSG00000044071	Fam19a2	6330575M02|FAM19A2 TAFA-2|TAFA2|Tafa-2	family with sequence similarity 19, member A2	protein-coding
unique_peak1-1378-10-3-1.35641534500877-1.75805390616669	chr12	54396235	54396854	+	0	NA	intron (NM_013780, intron 1 of 11)	intron (NM_013780, intron 1 of 11)	46880	NM_013780	27386	Mm.247044	NM_013780	ENSMUSG00000021010	Npas3	4930423H22Rik|bHLHe12	neuronal PAS domain protein 3	protein-coding
unique_peak2-32890-9-29--1.7172771892043-2.70611768348013	chr10	13964644	13965733	+	0	NA	Intergenic	MLT2B4|LTR|ERVL	279003	NM_010437	15273	Mm.42157	NM_010437	ENSMUSG00000015501	Hivep2	MIBP1|Schnurri-2|Shn-2	human immunodeficiency virus type I enhancer binding protein 2	protein-coding
common_peak2-25060-24-27--0.0141450192898871-0.304978344874324	chr18	34372591	34373383	+	0	NA	intron (NR_040534, intron 1 of 1)	L1MC|LINE|L1	-7651	NM_007462	11789	Mm.384171	NM_007462	ENSMUSG00000005871	Apc	AI047805|AU020952|AW124434|CC1|Min|mAPC	adenomatosis polyposis coli	protein-coding
common_peak1-13186-49-44-0.514430726695509-1.10994003514438	chr19	18670522	18671803	+	0	NA	intron (NM_017375, intron 2 of 9)	intron (NM_017375, intron 2 of 9)	35141	NM_017375	20409	Mm.172222	NM_017375		Ostf1	C78236|SH3P2|Sh3d3	osteoclast stimulating factor 1	protein-coding
common_peak1-17553-12-15--0.351224014912361-0.332077462497413	chr7	30169146	30169808	+	0	NA	intron (NM_001081028, intron 8 of 22)	intron (NM_001081028, intron 8 of 22)	80453	NM_013874	29861	Mm.101885	NM_013874	ENSMUSG00000030584	Dpf1	Neud4	D4, zinc and double PHD fingers family 1	protein-coding
unique_peak1-2971-15-0-4.01216475055566-5.11750992628768	chr17	74487501	74487985	+	0	NA	Intergenic	RLTR13D6|LTR|ERVK	-90487	NM_053188	94224	Mm.38933	NM_053188	ENSMUSG00000038541	Srd5a2	5ART2|S5AR 2	steroid 5 alpha-reductase 2	protein-coding
common_peak2-25555-31-29-0.318348075204605-0.512115693271959	chr19	6276930	6278013	+	0	NA	intron (NM_010119, intron 1 of 4)	CpG	575	NM_010119	13660	Mm.30169	NM_010119	ENSMUSG00000024772	Ehd1	AA409636|Past1|RME-1	EH-domain containing 1	protein-coding
common_peak1-14210-13-22--0.745089925419244-0.690311289528838	chr2	150361811	150362535	+	0	NA	Intergenic	Lx|LINE|L1	-33978	NM_009977	13011	Mm.12965	NM_009977	ENSMUSG00000068129	Cst7	Cmap	cystatin F (leukocystatin)	protein-coding
common_peak1-8266-8-6-0.197867495889966-1.03789460276074	chr10	23786449	23786972	+	0	NA	Intergenic	Intergenic	-9596	NM_001010830	215859	Mm.377239	NM_001010830	ENSMUSG00000096442	Taar8a	Gm230|taR-8a	trace amine-associated receptor 8A	protein-coding
common_peak1-13202-12-4-1.32684789020028-2.04196296489515	chr19	21784721	21785231	+	0	NA	Intergenic	B2_Mm2|SINE|B2	57177	NM_146096	226016	Mm.28796	NM_146096	ENSMUSG00000047368	Abhd17b	5730446C15Rik|Cgi67|Fam108b|Fam108b1	abhydrolase domain containing 17B	protein-coding
common_peak2-20165-19-24--0.241168863113038-0.344491671143527	chr1	171102248	171103037	+	0	NA	Intergenic	B3|SINE|B2	358953	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
unique_peak2-32738-6-13--1.2419568116773-1.58711810488664	chr1	165193652	165194279	+	0	NA	intron (NM_001025570, intron 1 of 2)	intron (NM_001025570, intron 1 of 2)	49816	NM_011127	18933	Mm.288642	NM_011127	ENSMUSG00000026586	Prrx1	A230024N07Rik|AA755424|AI385634|AI843499|K-2|Pmx|Pmx1|Prx1|mHox	paired related homeobox 1	protein-coding
common_peak1-9393-17-33--0.869166503045301-1.12969433525548	chr11	99386051	99386917	+	0	NA	Intergenic	Intergenic	-3912	NM_213730	237934	Mm.484091	NM_213730	ENSMUSG00000064165	Krt39	4732494G06Rik|Ka35	keratin 39	protein-coding
common_peak1-11579-20-15-0.488074784591193-0.590343908676236	chr16	14163281	14164242	+	0	NA	intron (NM_001114085, intron 1 of 8)	CpG	393	NM_001114085	67203	Mm.24105	NM_023317	ENSMUSG00000022678	Nde1	2810027M15Rik|AU042936|AW822251|Nude|mNudE	nuclear distribution gene E homolog 1 (A nidulans)	protein-coding
unique_peak1-4858-13-4-1.45654393575041-2.23384849113406	chr4	118537882	118538508	+	0	NA	Intergenic	(TCTCTG)n|Simple_repeat|Simple_repeat	-3193	NM_001011856	258159	Mm.388910	NM_001011856	ENSMUSG00000073769	Olfr1331	MOR259-3P	olfactory receptor 1331	protein-coding
unique_peak1-3067-10-0-3.35641534500877-3.31132995230379	chr18	11046897	11047381	+	0	NA	intron (NR_105023, intron 4 of 5)	intron (NR_105023, intron 4 of 5)	-5369	NM_010258	14465	Mm.329287	NM_010258	ENSMUSG00000005836	Gata6	AA410133|GATA-6	GATA binding protein 6	protein-coding
common_peak1-12473-18-9-0.990991056340989-1.23014042908325	chr17	84114315	84115086	+	0	NA	intron (NM_001171053, intron 3 of 13)	intron (NM_001171053, intron 3 of 13)	9197	NM_001171052	116871	Mm.277668	NM_054082	ENSMUSG00000055817	Mta3	1110002J22Rik|mKIAA1266	metastasis associated 3	protein-coding
common_peak2-26955-224-301-0.400158511864422-3.29009950323046	chr2	164910870	164912449	+	0	NA	intron (NR_033448, intron 2 of 2)	intron (NR_033448, intron 2 of 2)	4591	NR_033448	72211	Mm.482899	NR_033448	ENSMUSG00000078935	1700025C18Rik	-	RIKEN cDNA 1700025C18 gene	ncRNA
common_peak1-11750-13-16--0.30899081061257-0.330004445983672	chr16	36694048	36694729	+	0	NA	intron (NM_001285788, intron 1 of 7)	intron (NM_001285788, intron 1 of 7)	324	NM_001285791	106347	Mm.17807	NM_134109	ENSMUSG00000022900	Ildr1	AU041483|AU044638	immunoglobulin-like domain containing receptor 1	protein-coding
common_peak2-24396-29-30-0.158093770228236-0.384630725886669	chr17	13742878	13743965	+	0	NA	intron (NR_045436, intron 1 of 4)	intron (NR_045436, intron 1 of 4)	3539	NR_045436	72578	Mm.46549	NR_045436	ENSMUSG00000038347	2700054A10Rik	-	RIKEN cDNA 2700054A10 gene	ncRNA
common_peak1-8127-8-17--1.16470258349474-1.02063122982878	chr1	186705143	186705671	+	0	NA	intron (NM_178692, intron 1 of 1)	PB1D10|SINE|Alu	1508	NM_178692	226777	Mm.169542	NM_178692	ENSMUSG00000039349	C130074G19Rik	-	RIKEN cDNA C130074G19 gene	protein-coding
common_peak1-15913-28-14-1.14606852421294-2.01759298435799	chr5	23616304	23617452	+	0	NA	intron (NM_026448, intron 1 of 10)	intron (NM_026448, intron 1 of 10)	10470	NM_026448	52323	Mm.273768	NM_026448	ENSMUSG00000028986	Klhl7	2700038B03Rik|D5Ertd363e|SBBI26	kelch-like 7	protein-coding
unique_peak2-38674-5-23--2.28934283672701-3.02403524675804	chr7	99586291	99587002	+	0	NA	intron (NM_001243046, intron 13 of 14)	intron (NM_001243046, intron 13 of 14)	-123013	NM_025515	66365	Mm.21173	NM_025515	ENSMUSG00000030613	Ccdc90b	2310015N07Rik|C86558	coiled-coil domain containing 90B	protein-coding
common_peak1-15330-11-13--0.298661337805991-0.337263207250336	chr4	46639323	46639785	+	0	NA	intron (NM_198664, intron 5 of 12)	intron (NM_198664, intron 5 of 12)	23517	NM_198664	381605	Mm.331595	NM_198664	ENSMUSG00000039813	Tbc1d2	A630005A06Rik|BC022630|Gm1037|PARIS-1|PARIS1	TBC1 domain family, member 2	protein-coding
common_peak2-31234-14-10-0.439784541720347-0.519648556297791	chr8	70001408	70002004	+	0	NA	Intergenic	Intergenic	-12951	NM_008673	17960	Mm.14125	NM_008673	ENSMUSG00000025588	Nat1	Nat-1	N-acetyl transferase 1	protein-coding
common_peak1-8409-16-18--0.129663871175524-0.307235046933848	chr10	69929838	69930540	+	0	NA	intron (NM_024244, intron 3 of 13)	intron (NM_024244, intron 3 of 13)	26531	NM_001143776	71721	Mm.477813	NM_024244	ENSMUSG00000043259	Fam13c	1200015N20Rik|C030038O19Rik|mKIAA1796	family with sequence similarity 13, member C	protein-coding
common_peak1-15748-18-23--0.272043349492805-0.34651636097721	chr4	149457898	149458726	+	0	NA	Intergenic	MTC|LTR|MaLR	-3300	NM_177366	269604	Mm.219307	NM_177366	ENSMUSG00000047875	Gpr157	F730108M23Rik	G protein-coupled receptor 157	protein-coding
common_peak1-15672-16-13-0.310908720210457-0.417187467413082	chr4	137230842	137231669	+	0	NA	intron (NM_029563, intron 1 of 23)	intron (NM_029563, intron 1 of 23)	-6327	NM_001081155	110351	Mm.180763	NM_029563	ENSMUSG00000041351	Rap1gap	1300019I11Rik|2310004O14Rik|AI427470|ARPP-90|Rap1GAP1|Rap1ga1	Rap1 GTPase-activating protein	protein-coding
common_peak1-11002-94-82-0.754550136502392-3.62998959544415	chr15	36842175	36844325	+	0	NA	Intergenic	Intergenic	93907	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
unique_peak2-38732-1-5--2.2120195109379-1.32905871926422	chr7	112376524	112376932	+	0	NA	Intergenic	ID_B1|SINE|B4	-23873	NM_147069	259072	Mm.377823	NM_147069	ENSMUSG00000048425	Olfr686	MOR35-1	olfactory receptor 686	protein-coding
common_peak1-12520-17-15-0.218296338205038-0.403453972741633	chr18	38338374	38339202	+	0	NA	Intergenic	Intergenic	30628	NM_029357	75599	Mm.36560	NM_029357	ENSMUSG00000051375	Pcdh1	2010005A06Rik|AI585920	protocadherin 1	protein-coding
common_peak1-9147-11-10-0.0492619656143161-0.31137425193576	chr11	76494158	76494679	+	0	NA	intron (NM_177709, intron 1 of 2)	intron (NM_177709, intron 1 of 2)	1043	NM_177709	237858	Mm.127006	NM_177709	ENSMUSG00000046275	Tusc5	C130069F04Rik|DSPB1|Lost1	tumor suppressor candidate 5	protein-coding
unique_peak1-4299-35-9-2.10944216357514-5.54974207605759	chr2	146026793	146028049	+	0	NA	Intergenic	Intergenic	-20312	NM_016889	53626	Mm.379070	NM_016889	ENSMUSG00000068154	Insm1	IA-1	insulinoma-associated 1	protein-coding
unique_peak1-2196-15-3-2.01216475055566-3.03427613622886	chr15	66789141	66789939	+	0	NA	intron (NM_008681, intron 3 of 15)	intron (NM_008681, intron 3 of 15)	11663	NM_008681	17988	Mm.30837	NM_008681	ENSMUSG00000005125	Ndrg1	CAP43|CMT4D|DRG1|HMSNL|NMSL|Ndr1|Ndrl|PROXY1|RTP|TDD5	N-myc downstream regulated gene 1	protein-coding
common_peak2-21891-11-27--1.29866133780599-1.81053432848961	chr12	3365030	3365835	+	0	NA	5' UTR (NM_008445, exon 1 of 8)	5' UTR (NM_008445, exon 1 of 8)	300	NM_008445	16570	Mm.7688	NM_008445	ENSMUSG00000020668	Kif3c	mKIAA4058	kinesin family member 3C	protein-coding
unique_peak2-37551-3-23--2.99894559068043-4.08960682824985	chr5	31626654	31627381	+	0	NA	intron (NM_144909, intron 17 of 18)	intron (NM_144909, intron 17 of 18)	27063	NM_144909	231103	Mm.100043	NM_144909	ENSMUSG00000059434	Gckr	GKRP	glucokinase regulatory protein	protein-coding
common_peak1-16048-31-15-1.22523867081312-2.38724857749548	chr5	39716145	39717139	+	0	NA	Intergenic	Intergenic	278171	NR_045416	75095	Mm.332354	NR_045416		4930513D17Rik	-	RIKEN cDNA 4930513D17 gene	ncRNA
common_peak1-9239-15-32--1.0322293688028-1.48160942223867	chr11	86483695	86484528	+	0	NA	intron (NM_029478, intron 1 of 11)	B1_Mus2|SINE|Alu	13213	NM_029478	75909	Mm.390398	NM_029478	ENSMUSG00000018171	Vmp1	3110098I04Rik|4930579A11Rik|AI787464|Tango5|Tmem49|ni-2	vacuole membrane protein 1	protein-coding
common_peak2-27662-17-13-0.410941416147434-0.546772548767014	chr3	108780968	108781729	+	0	NA	intron (NM_001163567, intron 10 of 10)	intron (NM_001163567, intron 10 of 10)	37873	NM_001078646	66715	Mm.158124	NM_025723	ENSMUSG00000045662	Henmt1	4921515J06Rik|Hen1|mHEN1	HEN1 methyltransferase homolog 1 (Arabidopsis)	protein-coding
common_peak1-19273-21-23--0.0154732354549205-0.305650498375555	chr9	116312951	116313915	+	0	NA	Intergenic	Intergenic	-228952	NM_009371	21813	Mm.172346	NM_009371	ENSMUSG00000032440	Tgfbr2	1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII	transforming growth factor, beta receptor II	protein-coding
unique_peak1-4885-10-0-3.35641534500877-3.31132995230379	chr4	41108533	41108954	+	0	NA	intron (NM_026275, intron 1 of 4)	RLTR16|LTR|ERVK	25689	NM_026275	67615	Mm.389540	NM_026275	ENSMUSG00000036241	Ube2r2	1200003M11Rik|Cdc34b|Ubc3b	ubiquitin-conjugating enzyme E2R 2	protein-coding
unique_peak2-39895-8-17--1.16470258349474-1.02063122982878	chrX	85776922	85777631	+	0	NA	Intergenic	Intergenic	227616	NR_035440	100316809		NR_035440	miRBase:MI0008321	Mir1906-1	Mir1906|Mirn1906|mmu-mir-1906|mmu-mir-1906-1	microRNA 1906-1	ncRNA
unique_peak2-32573-8-11--0.579740082773585-1.14218153353838	chr1	86498600	86499147	+	0	NA	Intergenic	Intergenic	996512	NM_030194	109032	Mm.335802	NM_030194	ENSMUSG00000070034	Sp110	5031415C07Rik|52kDa|5830484A20Rik|ENSMUSG00000075603|Ifi75|Ipr1	Sp110 nuclear body protein	protein-coding
common_peak1-7493-66-125--0.458796259074076-1.39500855141518	chr1	10232079	10233755	+	0	NA	Intergenic	Intergenic	-10166	NM_001102430	211673	Mm.229141	NM_001102430	ENSMUSG00000067851	Arfgef1	ARFGEP1|BIG1|D130059B05Rik|D730028O18Rik|P200	ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited)	protein-coding
common_peak2-21071-55-72-0.0147953122726845-0.30697942122102	chr11	49049853	49052228	+	0	NA	Intergenic	Intergenic	-6653	NM_010794	17308	Mm.196933	NM_010794	ENSMUSG00000020346	Mgat1	Mgat-1	mannoside acetylglucosaminyltransferase 1	protein-coding
common_peak2-29644-40-48-0.0442658386358898-0.320773676263618	chr6	66896167	66897214	+	0	NA	intron (NM_001177560, intron 3 of 4)	intron (NM_001177560, intron 3 of 4)	49805	NM_001177558	14701	Mm.234342	NM_025278	ENSMUSG00000036402	Gng12	2010305F15Rik|AA536815|AI115529|AI314170|AI842738	guanine nucleotide binding protein (G protein), gamma 12	protein-coding
common_peak1-10086-9-10--0.269818212233077-1.05503135781948	chr13	23710042	23710522	+	0	NA	intron (NM_001177653, intron 1 of 1)	intron (NM_001177653, intron 1 of 1)	2681	NM_001177653	319179	Mm.440391	NM_178194	ENSMUSG00000047246	Hist1h2be	-	histone cluster 1, H2be	protein-coding
common_peak2-22395-12-8-0.478850983645327-0.562038191119709	chr13	32939476	32939903	+	0	NA	intron (NM_025429, intron 3 of 6)	CT-rich|Low_complexity|Low_complexity	3365	NM_025429	66222	Mm.20144	NM_025429	ENSMUSG00000044734	Serpinb1a	1190005M04Rik|AI325983|EI|EIA|ELANH2|LEI|M/NEI|MNEI|PI2	serine (or cysteine) peptidase inhibitor, clade B, member 1a	protein-coding
common_peak1-9697-19-47--1.18227517405947-2.51566814918164	chr12	21416921	21417795	+	0	NA	intron (NM_011739, intron 1 of 4)	B2_Mm2|SINE|B2	5939	NM_011739	22630	Mm.289630	NM_011739	ENSMUSG00000076432	Ywhaq	2700028P07Rik|AA409740|AU021156|R74690	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide	protein-coding
common_peak2-21554-3-15--2.41398308995928-2.80787975886178	chr11	96919040	96919639	+	0	NA	intron (NM_001081434, intron 12 of 22)	MIR|SINE|MIR	-5743	NR_106181	102465893		NR_106181		Mir8103	mmu-mir-8103	microRNA mir-8103	ncRNA
common_peak2-23146-85-114-0.109913197180276-0.392295196716639	chr14	105895634	105898119	+	0	NA	Intergenic	Intergenic	-1129	NR_045921	74864	Mm.159344	NR_045921	ENSMUSG00000022116	4930449E01Rik	-	RIKEN cDNA 4930449E01 gene	ncRNA
common_peak1-17728-12-18--0.599151528355947-0.476916024233333	chr7	80323748	80324334	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-77087	NR_046024	625243	Mm.261798	NR_046024		Gm6567	-	predicted gene 6567	ncRNA
unique_peak2-38486-1-13--3.43441193227435-3.36932189928148	chr7	31208215	31208731	+	0	NA	5' UTR (NM_172142, exon 1 of 11)	5' UTR (NM_172142, exon 1 of 11)	150	NM_172142	243910	Mm.386878	NM_172142	ENSMUSG00000036931	Nfkbid	IkappaBNS	nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, delta	protein-coding
unique_peak1-4959-7-3-0.799090830298189-1.23214870625617	chr4	99093088	99093602	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-229645	NM_010425	15221	Mm.4758	NM_010425	ENSMUSG00000067261	Foxd3	CWH3|Genesis|Hfh2	forkhead box D3	protein-coding
common_peak2-22765-34-37-0.134141013557681-0.369793428364259	chr13	119661747	119662886	+	0	NA	Intergenic	MT2B|LTR|ERVL	158810	NM_008002	14165	Mm.317323	NM_008002	ENSMUSG00000021732	Fgf10	AEY17|BB213776|Fgf-10|Gsfaey17	fibroblast growth factor 10	protein-coding
unique_peak2-35872-6-5--0.0195643903408542-0.947717972411649	chr18	79622229	79622610	+	0	NA	Intergenic	L1Md_T|LINE|L1	-316289	NM_053099	240427	Mm.312871	NM_053099	ENSMUSG00000024548	Setbp1	C130092E12|Seb|mKIAA0437	SET binding protein 1	protein-coding
unique_peak1-5862-13-3-1.77847203063777-2.58603100924543	chr6	84304187	84304799	+	0	NA	Intergenic	MTD|LTR|MaLR	69339	NR_046063	100038556	Mm.387783	NR_046063		Gm10445	ENSMUSG00000072956	predicted gene 10445	ncRNA
common_peak2-31490-39-69--0.513521770025813-1.04068780415875	chr8	106618865	106620850	+	0	NA	Intergenic	Intergenic	-5668	NM_009868	12562	Mm.21767	NM_009868	ENSMUSG00000031871	Cdh5	7B4|AA408225|Cd144|VE-Cad|VECD|VEcad|Vec	cadherin 5	protein-coding
common_peak2-20211-7-8--0.370834171144123-1.00793137938329	chr1	179040964	179041455	+	0	NA	intron (NM_011785, intron 2 of 12)	intron (NM_011785, intron 2 of 12)	137689	NM_011785	23797	Mm.235194	NM_011785	ENSMUSG00000019699	Akt3	AI851531|D930002M15Rik|Nmf350	thymoma viral proto-oncogene 3	protein-coding
common_peak2-23624-36-56--0.353568927996987-0.561693437916856	chr15	83156878	83158287	+	0	NA	intron (NM_025445, intron 7 of 15)	intron (NM_025445, intron 7 of 15)	23095	NM_025445	66251	Mm.258910	NM_025445	ENSMUSG00000054277	Arfgap3	0610009H19Rik|1810004P07Rik|1810035F16Rik|9130416J18Rik|Arfgap1	ADP-ribosylation factor GTPase activating protein 3	protein-coding
unique_peak2-39794-4-8--1.19338551529556-1.21878474469819	chrX	13461774	13462239	+	0	NA	Intergenic	Intergenic	-38324	NM_009806	12361	Mm.327591	NM_009806	ENSMUSG00000031012	Cask	DXPri1|DXRib1|LIN-2|Pals3|mLin-2	calcium/calmodulin-dependent serine protein kinase (MAGUK family)	protein-coding
unique_peak2-39060-7-23--1.78587167042297-2.25371873249797	chr8	71312928	71313707	+	0	NA	Intergenic	ORR1C1|LTR|MaLR	-4511	NM_001293791	70885	Mm.252421	NM_027590	ENSMUSG00000031864	Ints10	4921521J11Rik|AI462004	integrator complex subunit 10	protein-coding
unique_peak1-2478-22-5-2.06232160436625-3.46164246247458	chr16	4474435	4475397	+	0	NA	Intergenic	Intergenic	48137	NM_175347	106393	Mm.35811	NM_175347	ENSMUSG00000022519	Srl	9830004M20Rik|AW108387|sar	sarcalumenin	protein-coding
common_peak1-15901-15-17--0.157760250886656-0.307611222530528	chr5	20882247	20883094	+	0	NA	3' UTR (NM_008013, exon 2 of 2)	3' UTR (NM_008013, exon 2 of 2)	4179	NM_008013	14190	Mm.292100	NM_008013	ENSMUSG00000039899	Fgl2	AI385601|musfiblp	fibrinogen-like protein 2	protein-coding
common_peak1-16783-21-7-1.56948926526624-2.44150343356329	chr6	39013656	39014518	+	0	NA	non-coding (NR_040523, exon 4 of 4)	non-coding (NR_040523, exon 4 of 4)	3498	NR_040523	69986	Mm.490941	NR_040523		1700025N23Rik	-	RIKEN cDNA 1700025N23 gene	ncRNA
unique_peak1-6546-11-1-2.50869358425161-2.83420869758413	chr7	127285967	127286605	+	0	NA	intron (NM_011775, intron 4 of 17)	intron (NM_011775, intron 4 of 17)	2518	NM_011775	22787	Mm.6510	NM_011775	ENSMUSG00000030911	Zp2	Zp-2	zona pellucida glycoprotein 2	protein-coding
common_peak2-23473-16-12-0.417823924126969-0.489164546851866	chr15	73431071	73431616	+	0	NA	intron (NM_001033219, intron 2 of 7)	intron (NM_001033219, intron 2 of 7)	-4387	NM_001168255	106068	Mm.212813	NM_001033219	ENSMUSG00000079020	Slc45a4	9330175B01Rik|AW552276	solute carrier family 45, member 4	protein-coding
common_peak2-22800-7-9--0.522837264589173-1.05908390183068	chr14	8305022	8305450	+	0	NA	Intergenic	Intergenic	60249	NR_015568	68308	Mm.390669	NR_015568	ENSMUSG00000090585	4933406F09Rik	1700007H14Rik|4930429F21Rik|4930570O04Rik|Gm3768	RIKEN cDNA 4933406F09 gene	ncRNA
common_peak1-7715-29-40--0.245261924002973-0.373466121463214	chr1	87755921	87756984	+	0	NA	Intergenic	Intergenic	-34633	NM_022417	64294	Mm.29870	NM_022417	ENSMUSG00000026223	Itm2c	3110038L02Rik|BRI3|Bricd2c|E25|E25C|ITM3	integral membrane protein 2C	protein-coding
unique_peak1-1534-10-3-1.35641534500877-1.75805390616669	chr13	16715277	16715876	+	0	NA	Intergenic	L1Md_F2|LINE|L1	609268	NM_008380	16323	Mm.8042	NM_008380	ENSMUSG00000041324	Inhba	-	inhibin beta-A	protein-coding
common_peak2-26275-10-12--0.344024373132323-0.340565874754526	chr2	30718719	30719231	+	0	NA	intron (NM_009116, intron 1 of 3)	intron (NM_009116, intron 1 of 3)	18088	NM_009116	20204	Mm.1802	NM_009116	ENSMUSG00000039476	Prrx2	Prx2|S8	paired related homeobox 2	protein-coding
unique_peak2-36592-5-7--0.704380336005853-1.01466476204226	chr2	175965459	175965920	+	0	NA	intron (NR_040256, intron 3 of 4)	RLTR26|LTR|ERVK	-35457	NM_001177404	100303732	Mm.484983	NM_001177404		Gm14431	OTTMUSG00000016608	predicted gene 14431	protein-coding
common_peak2-23324-18-7-1.31291915122835-1.71830443967823	chr15	36932584	36933014	+	0	NA	intron (NM_026521, intron 2 of 3)	MIR|SINE|MIR	4358	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
common_peak2-22364-12-12--0.0516637330534535-0.309718203022949	chr13	28630346	28630951	+	0	NA	intron (NR_045053, intron 7 of 8)	Lx7|LINE|L1	172094	NR_105787	102466635		NR_105787	miRBase:MI0021897	Mir6368	mmu-mir-6368	microRNA mir-6368	ncRNA
unique_peak2-33089-8-18--1.24270509549601-1.15812782348128	chr10	80167730	80168301	+	0	NA	3' UTR (NM_027829, exon 10 of 10)	3' UTR (NM_027829, exon 10 of 10)	2577	NM_027829	71564	Mm.35802	NM_027829	ENSMUSG00000055862	Izumo4	9030607L17Rik|AI550407	IZUMO family member 4	protein-coding
common_peak1-18176-8-3-1.00522241794757-1.39487600375387	chr8	14818937	14819460	+	0	NA	intron (NM_172910, intron 9 of 15)	intron (NM_172910, intron 9 of 15)	-69338	NM_012000	26889	Mm.254027	NM_012000	ENSMUSG00000026317	Cln8	mnd	ceroid-lipofuscinosis, neuronal 8	protein-coding
unique_peak2-36190-3-5--0.998945590680433-0.96108193396963	chr2	30929180	30929709	+	0	NA	intron (NM_001038700, intron 6 of 14)	intron (NM_001038700, intron 6 of 14)	22576	NM_001177650	14269	Mm.52297	NM_019406	ENSMUSG00000075415	Fnbp1	1110057E06Rik|2210010H06Rik|FBP1|Fbp17	formin binding protein 1	protein-coding
unique_peak2-33513-6-12--1.13504160776079-1.45089835786865	chr11	74896632	74897131	+	0	NA	intron (NM_001002764, intron 13 of 18)	intron (NM_001002764, intron 13 of 18)	-17388	NR_030454	735274		NR_030454		Mir684-1	Mirn684-1	microRNA 684-1	ncRNA
common_peak2-28955-19-23--0.18227517405947-0.320777457303847	chr5	100621787	100622725	+	0	NA	Intergenic	Intergenic	-17455	NR_040679	69571	Mm.396412	NR_040679		2310034O05Rik	-	RIKEN cDNA 2310034O05 gene	ncRNA
common_peak2-20775-33-67--0.75612527872481-1.79658675346641	chr10	117709840	117710879	+	0	NA	Intergenic	MTC|LTR|MaLR	21735	NM_054079	116849	Mm.213193	NM_054079	ENSMUSG00000090461	Iltifb	IL-22b|IL-TIFb|Il22b	interleukin 10-related T cell-derived inducible factor beta	protein-coding
common_peak2-27715-5-6--0.511735258063458-0.947717972411649	chr3	122458998	122459433	+	0	NA	intron (NM_153422, intron 2 of 20)	intron (NM_153422, intron 2 of 20)	27139	NM_153422	242202	Mm.134911	NM_153422	ENSMUSG00000053965	Pde5a	Cgbpde|Cn5n|Pde5|Pde5a1	phosphodiesterase 5A, cGMP-specific	protein-coding
unique_peak1-5120-10-5-0.771452844287613-1.33892459842472	chr5	65437539	65438034	+	0	NA	Intergenic	RMER17C|LTR|ERVK	76229	NR_030577	100124451		NR_030577	miRBase:MI0005518	Mir574	Mirn574|mmu-mir-574	microRNA 574	ncRNA
common_peak1-8126-20-14-0.581184188982674-0.690311289528838	chr1	186609902	186610746	+	0	NA	TTS (NM_001290273)	TTS (NM_001290273)	24855	NM_001290273	66112	Mm.272457	NM_001081361	ENSMUSG00000026621	Marc1	1300013F15Rik|Mosc1	mitochondrial amidoxime reducing component 1	protein-coding
unique_peak2-35428-5-16--1.79184317725619-1.61682445937017	chr17	34837136	34837638	+	0	NA	intron (NM_031176, intron 16 of 32)	intron (NM_031176, intron 16 of 32)	29907	NM_031176	81877	Mm.290527	NM_031176	ENSMUSG00000033327	Tnxb	Tn-mhc|Tnx	tenascin XB	protein-coding
unique_peak2-35043-7-10--0.660340788339108-1.12966497611638	chr16	4469436	4469981	+	0	NA	Intergenic	Intergenic	-49210	NM_009624	11515	Mm.439750	NM_009624	ENSMUSG00000005580	Adcy9	ACtp10|AW125421|D16Wsu65e|mKIAA0520	adenylate cyclase 9	protein-coding
unique_peak2-36337-5-6--0.511735258063458-0.947717972411649	chr2	91264666	91265054	+	0	NA	intron (NM_175123, intron 1 of 8)	intron (NM_175123, intron 1 of 8)	19939	NM_175123	228356	Mm.386861	NM_175123	ENSMUSG00000040591	1110051M20Rik	AI586322	RIKEN cDNA 1110051M20 gene	protein-coding
unique_peak2-38922-9-25--1.51082631173687-2.00244947055753	chr8	20557692	20558204	+	0	NA	Intergenic	Intergenic	-537556	NR_028428	381598	Mm.359054	NM_001024708	ENSMUSG00000071793	2610005L07Rik	2810038F24Rik|6720476A01Rik	cadherin 11 pseudogene	pseudo
common_peak1-11613-8-9--0.316705676939792-1.03275496310833	chr16	18194565	18195047	+	0	NA	Intergenic	Intergenic	18820	NR_027843	66779	Mm.387525	NR_015575		4933432I09Rik	-	RIKEN cDNA 4933432I09 gene	ncRNA
common_peak1-11102-32-27-0.471737097162056-0.777451270049544	chr15	61535581	61537091	+	0	NA	intron (NR_040350, intron 4 of 4)	intron (NR_040350, intron 4 of 4)	69670	NR_040350	432956	Mm.404918	NR_040350		D030024E09Rik	-	RIKEN cDNA D030024E09 gene	ncRNA
unique_peak1-2734-10-2-1.77145284428761-2.09384600808989	chr16	97496350	97496876	+	0	NA	Intergenic	Intergenic	-81722	NM_019517	56175	Mm.97885	NM_019517	ENSMUSG00000040605	Bace2	1110059C24Rik|AEPLC|AI850424|ALP56|ARP1|ASP21|BAE2|CDA13|CEAP1|DRAP	beta-site APP-cleaving enzyme 2	protein-coding
common_peak1-8398-23-40--0.635784500109003-0.950816664083192	chr10	67548471	67549600	+	0	NA	Intergenic	Intergenic	106689	NM_001081346	170799	Mm.209844	NM_133244	ENSMUSG00000037846	Rtkn2	B130039D23Rik|Mbf|Plekhk1	rhotekin 2	protein-coding
common_peak2-31475-5-15--1.70438033600585-1.4372489031793	chr8	106137508	106138145	+	0	NA	intron (NR_045730, intron 1 of 4)	intron (NR_045730, intron 1 of 4)	10127	NR_045730	71058	Mm.67707	NR_045730		4933400L20Rik	-	RIKEN cDNA 4933400L20 gene	ncRNA
common_peak2-24137-45-78--0.443422722832231-0.942020504123675	chr16	36070946	36072584	+	0	NA	promoter-TSS (NM_027342)	promoter-TSS (NM_027342)	19	NM_001159421	381045	Mm.310434	NM_198645	ENSMUSG00000075229	Ccdc58	A930007B11Rik|AI413631	coiled-coil domain containing 58	protein-coding
common_peak1-17086-20-40--0.869477220026891-1.45230360914611	chr6	108828576	108829356	+	0	NA	Intergenic	RMER6A|LTR|ERVK	50331	NM_138677	192193	Mm.21596	NM_138677	ENSMUSG00000030104	Edem1	A130059K23Rik|EDEM|mKIAA0212	ER degradation enhancer, mannosidase alpha-like 1	protein-coding
common_peak2-29250-7-10--0.660340788339108-1.12966497611638	chr5	139826134	139826678	+	0	NA	Intergenic	B4|SINE|B4	-2165	NM_001160265	545817	Mm.482474	NM_001160265	ENSMUSG00000029541	Cyp2w1	Gm455	cytochrome P450, family 2, subfamily w, polypeptide 1	protein-coding
unique_peak2-35826-6-11--1.01956439034085-1.32595962126035	chr18	65052133	65052810	+	0	NA	intron (NM_001114386, intron 1 of 30)	intron (NM_001114386, intron 1 of 30)	5061	NM_001114386	83814	Mm.98668	NM_031881	ENSMUSG00000024589	Nedd4l	1300012C07Rik|Nedd4-2|Nedd4b	neural precursor cell expressed, developmentally down-regulated gene 4-like	protein-coding
common_peak2-20019-10-11--0.228547155712387-0.31137425193576	chr1	135730329	135730800	+	0	NA	Intergenic	MTD|LTR|MaLR	73186	NM_054076	269120	Mm.59985	NM_054076	ENSMUSG00000010311	Optc	-	opticin	protein-coding
common_peak1-17830-29-33-0.0248272393647717-0.313805205020552	chr7	109519115	109520038	+	0	NA	intron (NM_009287, intron 2 of 11)	intron (NM_009287, intron 2 of 11)	-70633	NM_009103	20133	Mm.197486	NM_009103	ENSMUSG00000030978	Rrm1	RnrM1	ribonucleotide reductase M1	protein-coding
common_peak1-12932-33-29-0.42444696691701-0.683454027796267	chr19	6060983	6062198	+	0	NA	exon (NM_013859, exon 1 of 1)	exon (NM_013859, exon 1 of 1)	383	NM_013859	29805	Mm.2310	NM_013859	ENSMUSG00000075227	Znhit2	C11orf5|Fon|ORF6|Znhit2-ps	zinc finger, HIT domain containing 2	protein-coding
unique_peak2-34574-13-15--0.221527969362231-0.308519316180257	chr14	66868834	66869638	+	0	NA	intron (NM_172498, intron 1 of 29)	intron (NM_172498, intron 1 of 29)	30653	NM_172498	19229	Mm.21613	NM_172498	ENSMUSG00000059456	Ptk2b	CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk	PTK2 protein tyrosine kinase 2 beta	protein-coding
common_peak1-10501-25-13-1.0544949832875-1.65862513589797	chr14	33341070	33342113	+	0	NA	intron (NM_001081221, intron 5 of 20)	intron (NM_001081221, intron 5 of 20)	14884	NM_001081221	319955	Mm.318310	NM_177043	ENSMUSG00000054051	Ercc6	4732403I04|C130058G22Rik|CSB	excision repair cross-complementing rodent repair deficiency, complementation group 6	protein-coding
common_peak2-24407-27-52--0.736374503667963-1.34506277748691	chr17	15065639	15066720	+	0	NA	intron (NM_175173, intron 3 of 24)	intron (NM_175173, intron 3 of 24)	13950	NM_175173	71682	Mm.122698	NM_175173	ENSMUSG00000046991	Wdr27	0610012K18Rik	WD repeat domain 27	protein-coding
unique_peak1-1331-12-2-2.06381348436648-2.79529063155376	chr12	8779911	8780545	+	0	NA	intron (NM_011519, intron 1 of 4)	intron (NM_011519, intron 1 of 4)	2026	NM_011519	20969	Mm.2580	NM_011519	ENSMUSG00000020592	Sdc1	AA408134|AA409076|CD138|Sstn|Synd|Synd1|syn-1	syndecan 1	protein-coding
unique_peak2-38457-1-5--2.2120195109379-1.32905871926422	chr7	28575770	28576093	+	0	NA	Intergenic	L1_Mur3|LINE|L1	25239	NR_033484	100043229	Mm.458666	NR_033484		Gm10046	ENSMUSG00000058661	predicted gene 10046	ncRNA
common_peak1-13154-139-189-0.238360759185252-0.945883966390176	chr19	10524658	10526167	+	0	NA	3' UTR (NM_173068, exon 11 of 11)	3' UTR (NM_173068, exon 11 of 11)	6525	NM_001111140	278795	Mm.490638	NM_001111140	ENSMUSG00000090291	Lrrc10b	Gm705|SerdinR	leucine rich repeat containing 10B	protein-coding
unique_peak1-6932-10-2-1.77145284428761-2.09384600808989	chr8	107288184	107288801	+	0	NA	Intergenic	Intergenic	30589	NM_133960	102022	Mm.212983	NM_133960	ENSMUSG00000055730	Ces2a	9130231C15Rik|AI266984|Ces6	carboxylesterase 2A	protein-coding
unique_peak2-38091-4-17--2.19338551529556-2.18192634393779	chr6	55617844	55618625	+	0	NA	Intergenic	Intergenic	13023	NM_009717	11922	Mm.5106	NM_009717	ENSMUSG00000037984	Neurod6	Atoh2|Math-2|Math2|Nex|Nex1m|bHLHa2	neurogenic differentiation 6	protein-coding
unique_peak2-38815-3-11--1.99894559068043-1.95434855131066	chr7	134263629	134264279	+	0	NA	intron (NM_133686, intron 1 of 3)	B3A|SINE|B2	1589	NM_133686	67375	Mm.26928	NM_133686		Qprt	2410027J01Rik|AI647766|QPRTase	quinolinate phosphoribosyltransferase	protein-coding
common_peak2-21707-18-30--0.641277159158523-0.738267116931589	chr11	107012047	107012740	+	0	NA	Intergenic	B1_Mur4|SINE|Alu	-19157	NM_176850	207165	Mm.343986	NM_176850	ENSMUSG00000040481	Bptf	9430093H17Rik|Falz	bromodomain PHD finger transcription factor	protein-coding
unique_peak1-1374-9-2-1.60465090568306-1.87199725847353	chr12	49508561	49509113	+	0	NA	Intergenic	MTA_Mm-int|LTR|MaLR	-975033	NM_001160112	15228	Mm.4704	NM_008241	ENSMUSG00000020950	Foxg1	2900064B05Rik|BF-1|Bf1|Hfh9|Hfhbf1	forkhead box G1	protein-coding
unique_peak2-34865-6-5--0.0195643903408542-0.947717972411649	chr15	77806281	77806704	+	0	NA	Intergenic	Intergenic	-5238	NM_018749	55944	Mm.3955	NM_018749	ENSMUSG00000016554	Eif3d	66/67kDa|AA407891|Eif3s7|eIF3p66	eukaryotic translation initiation factor 3, subunit D	protein-coding
unique_peak2-38532-3-11--1.99894559068043-1.95434855131066	chr7	46130582	46131133	+	0	NA	Intergenic	Intergenic	389047	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak1-403-18-0-4.31291915122835-NA	chr1	155826904	155827797	+	0	NA	Intergenic	B1F1|SINE|Alu	80291	NM_008131	14645	Mm.210745	NM_008131	ENSMUSG00000026473	Glul	GS|Glns	glutamate-ammonia ligase (glutamine synthetase)	protein-coding
unique_peak2-38150-5-10--1.16381195464315-1.33892459842472	chr6	86078079	86078597	+	0	NA	Intergenic	Intergenic	50296	NM_001271859	11519	Mm.104155	NM_013458		Add2	2900072M03Rik|add97	adducin 2 (beta)	protein-coding
common_peak1-19398-7-10--0.660340788339108-1.12966497611638	chrX	56455297	56455776	+	0	NA	intron (NM_001290414, intron 3 of 6)	L1MDa|LINE|L1	-36271	NM_001290415	14168	Mm.7995	NM_010200	ENSMUSG00000031137	Fgf13	Fhf2	fibroblast growth factor 13	protein-coding
common_peak1-12582-59-64-0.302996187844124-0.687867803885541	chr18	12972780	12974128	+	0	NA	intron (NM_001252490, intron 3 of 13)	intron (NM_001252490, intron 3 of 13)	4962	NR_045524	64291	Mm.259470	NM_020573	ENSMUSG00000044252	Osbpl1a	G430090F17Rik|Gm753|ORP-1|Osbpl1b	oxysterol binding protein-like 1A	protein-coding
common_peak2-26543-17-16-0.130833496954699-0.356936432242225	chr2	92743348	92743937	+	0	NA	Intergenic	Intergenic	-11616	NM_030725	80976	Mm.33490	NM_030725	ENSMUSG00000027220	Syt13	5730409J20Rik|AI549909|mKIAA1427	synaptotagmin XIII	protein-coding
common_peak2-24372-42-72--0.447495231012834-0.8613235380043	chr17	8164817	8166226	+	0	NA	intron (NM_025789, intron 3 of 7)	B1F1|SINE|Alu	27042	NM_025789	66832	Mm.29830	NM_025789	ENSMUSG00000073471	Rsph3a	1700012G05Rik|4930524H12Rik|R74860|Rshl2|Rshl2a	radial spoke 3A homolog (Chlamydomonas)	protein-coding
common_peak1-18552-28-38--0.232443099040786-0.377553616161376	chr8	104375116	104376508	+	0	NA	Intergenic	Intergenic	933199	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
common_peak2-25158-19-11-0.81772482594053-0.991115276827166	chr18	50023718	50024251	+	0	NA	exon (NM_001081371, exon 12 of 43)	exon (NM_001081371, exon 12 of 43)	31333	NM_001081371	240283	Mm.257790	NM_001081371	ENSMUSG00000037416	Dmxl1	C630007L23Rik|D030030C22	Dmx-like 1	protein-coding
common_peak2-21556-8-6-0.197867495889966-1.03789460276074	chr11	96943422	96943907	+	0	NA	Intergenic	Intergenic	18582	NR_106181	102465893		NR_106181		Mir8103	mmu-mir-8103	microRNA mir-8103	ncRNA
common_peak2-31123-16-37--1.12966387117552-1.94848218498813	chr8	33905592	33906620	+	0	NA	Intergenic	Intergenic	154392	NM_001177589	100042715	Mm.291093	NM_001177589		Gm3985	-	predicted gene 3985	protein-coding
common_peak1-13116-20-20-0.0957573618124323-0.321718508207528	chr19	8920321	8921291	+	0	NA	exon (NM_008144, exon 5 of 11)	exon (NM_008144, exon 5 of 11)	-4469	NM_001013019	68852	Mm.265792	NM_001013019	ENSMUSG00000071656	Lrrn4cl	1110067I12Rik	LRRN4 C-terminal like	protein-coding
unique_peak2-32582-3-9--1.73591118484664-1.57096726280955	chr1	89103390	89103865	+	0	NA	intron (NM_009604, intron 4 of 11)	intron (NM_009604, intron 4 of 11)	1241	NM_009604	11449	Mm.2810	NM_009604	ENSMUSG00000026253	Chrng	Achr-3|Acrg	cholinergic receptor, nicotinic, gamma polypeptide	protein-coding
unique_peak2-38103-7-9--0.522837264589173-1.05908390183068	chr6	67266321	67266738	+	0	NA	intron (NM_008354, intron 8 of 15)	intron (NM_008354, intron 8 of 15)	49556	NM_025814	66870	Mm.240490	NM_025814	ENSMUSG00000036371	Serbp1	1200009K13Rik|9330147J08Rik|AL022786|Pairbp1	serpine1 mRNA binding protein 1	protein-coding
unique_peak1-822-13-1-2.77847203063777-3.64038867156802	chr11	7237958	7238464	+	0	NA	Intergenic	Intergenic	-124285	NM_008343	16009	Mm.29254	NM_008343	ENSMUSG00000020427	Igfbp3	AI649005|IGFBP-3|IGgfbp3	insulin-like growth factor binding protein 3	protein-coding
unique_peak1-2792-8-0-3.00522241794757-2.70926996097583	chr17	13690774	13691305	+	0	NA	intron (NR_045437, intron 2 of 3)	RLTR10A|LTR|ERVK	-23283	NR_030763	272667	Mm.444718	NR_030763	ENSMUSG00000079711	Smok4a	4930513D10Rik|Smok2c	sperm motility kinase 4A	pseudo
common_peak1-9662-8-10--0.454209200689727-1.078512453669	chr12	3310406	3310884	+	0	NA	promoter-TSS (NM_016676)	promoter-TSS (NM_016676)	-676	NM_016676	19325	Mm.378993	NM_016676	ENSMUSG00000020671	Rab10	AW107754	RAB10, member RAS oncogene family	protein-coding
common_peak2-30253-12-11-0.0638134843664826-0.337263207250336	chr7	12818376	12818985	+	0	NA	Intergenic	L1_Mus1|LINE|L1	12015	NR_046074	100043092	Mm.367420	NR_046074		Gm4224	-	predicted gene 4224	ncRNA
common_peak2-20402-5-6--0.511735258063458-0.947717972411649	chr10	23786801	23787150	+	0	NA	Intergenic	Intergenic	-9331	NM_001010830	215859	Mm.377239	NM_001010830	ENSMUSG00000096442	Taar8a	Gm230|taR-8a	trace amine-associated receptor 8A	protein-coding
unique_peak1-1342-9-3-1.18961340640422-1.57096726280955	chr12	14301378	14301917	+	0	NA	Intergenic	Intergenic	33307	NR_045003	791361	Mm.217963	NR_045003		Gm16497	ENSMUSG00000066623	predicted gene 16497	ncRNA
common_peak2-28483-8-4-0.683294323060208-1.21878474469819	chr4	155582584	155582928	+	0	NA	Intergenic	Intergenic	5363	NR_030671	100382	Mm.461024	NR_030671		AW011738	-	expressed sequence AW011738	ncRNA
common_peak1-19129-62-69-0.281468441857118-0.662654265687252	chr9	78480415	78481706	+	0	NA	intron (NM_153098, intron 2 of 32)	intron (NM_153098, intron 2 of 32)	17707	NM_153098	235505	Mm.32955	NM_153098	ENSMUSG00000046186	Cd109	9930012E15Rik|AI480638|GARP	CD109 antigen	protein-coding
common_peak1-13796-30-33-0.082212568241534-0.329362479200675	chr2	39064906	39066060	+	0	NA	intron (NM_024209, intron 2 of 6)	B1F|SINE|Alu	16375	NM_024209	67857	Mm.389242	NM_024209		Ppp6c	2310003C10Rik	protein phosphatase 6, catalytic subunit	protein-coding
common_peak2-27749-31-44--0.266614425516551-0.432554671146866	chr3	127552469	127553763	+	0	NA	Intergenic	Lx8|LINE|L1	-12706	NM_145964	211556	Mm.403486	NM_145964	ENSMUSG00000074238	Ap1ar	AA407621|C78909|Gadkin	adaptor-related protein complex 1 associated regulatory protein	protein-coding
common_peak1-18856-39-29-0.708870651310635-1.42714050806394	chr9	21024147	21025378	+	0	NA	Intergenic	B1F1|SINE|Alu	19014	NM_016679	50868	Mm.248266	NM_016679	ENSMUSG00000003308	Keap1	INRF2|mKIAA0132	kelch-like ECH-associated protein 1	protein-coding
common_peak2-21467-93-169--0.298321072631433-0.981924396091499	chr11	87442618	87443622	+	0	NA	intron (NM_001045527, intron 2 of 5)	intron (NM_001045527, intron 2 of 5)	12454	NM_001045527	327992	Mm.390371	NM_001045527	ENSMUSG00000070345	Hsf5	Gm739|MLZ-220	heat shock transcription factor family member 5	protein-coding
common_peak2-26222-44-60--0.108844502994351-0.317735460399505	chr2	26963932	26964959	+	0	NA	TTS (NM_029981)	TTS (NM_029981)	29544	NM_029981	77794	Mm.330088	NM_029981	ENSMUSG00000036040	Adamtsl2	A930008K15Rik|tcp-1	ADAMTS-like 2	protein-coding
unique_peak1-5961-14-7-0.899216160357645-0.947446088118041	chr6	93258437	93259245	+	0	NA	Intergenic	L1_Mus2|LINE|L1	368265	NR_015530	330385	Mm.483472	NR_015530	ENSMUSG00000097462	9530026P05Rik	B430306B02	RIKEN cDNA 9530026P05 gene	ncRNA
unique_peak1-4414-7-4-0.477162735410827-1.09384600808989	chr2	167743900	167744404	+	0	NA	Intergenic	Intergenic	-13675	NM_011201	19246	Mm.277916	NM_011201	ENSMUSG00000027540	Ptpn1	PTP-1B|PTP-HA2|PTP1B	protein tyrosine phosphatase, non-receptor type 1	protein-coding
unique_peak1-2637-8-0-3.00522241794757-2.70926996097583	chr16	43930073	43930473	+	0	NA	intron (NM_027801, intron 6 of 15)	intron (NM_027801, intron 6 of 15)	40258	NM_027801	212153	Mm.209835	NM_027801	ENSMUSG00000022701	2610015P09Rik	8430422M09Rik|AU040712	RIKEN cDNA 2610015P09 gene	protein-coding
unique_peak2-39275-11-5-0.923731083530457-1.477227296591	chr8	121850729	121851091	+	0	NA	Intergenic	Intergenic	-17528	NM_024219	68196	Mm.358714	NM_024219	ENSMUSG00000031839	Hsbp1	0610007A03Rik|AA408769|Hsp25	heat shock factor binding protein 1	protein-coding
common_peak1-12230-30-32-0.12528129013342-0.352152970649944	chr17	35049739	35050949	+	0	NA	intron (NM_147151, intron 26 of 26)	intron (NM_147151, intron 26 of 26)	-1067	NM_023557	70129	Mm.183126	NM_023557	ENSMUSG00000007034	Slc44a4	2210409B01Rik|NG22	solute carrier family 44, member 4	protein-coding
common_peak2-25869-79-76-0.562048626481719-1.96253105648089	chr19	43616165	43617411	+	0	NA	Intergenic	Intergenic	-17693	NM_010324	14718	Mm.19039	NM_010324	ENSMUSG00000025190	Got1	AI789014|Got-1|cAspAT|cCAT	glutamate oxaloacetate transaminase 1, soluble	protein-coding
common_peak2-30232-5-9--1.02630843089322-1.21398586181642	chr7	4501902	4502193	+	0	NA	intron (NM_207270, intron 18 of 19)	B1_Mur4|SINE|Alu	-3878	NM_016908	53420	Mm.358663	NM_016908	ENSMUSG00000004961	Syt5	SytV	synaptotagmin V	protein-coding
common_peak2-20604-15-11-0.4272022498345-0.503257505534083	chr10	79983776	79984385	+	0	NA	intron (NM_026094, intron 27 of 27)	L1MB5|LINE|L1	17789	NM_026094	67331	Mm.52511	NM_026094	ENSMUSG00000003341	Atp8b3	1700042F02Rik|1700056N23Rik|ATPIK|SAPLT	ATPase, class I, type 8B, member 3	protein-coding
common_peak2-26205-17-16-0.130833496954699-0.356936432242225	chr2	26118576	26119334	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-26015	NM_153559	227638	Mm.116769	NM_153559	ENSMUSG00000036327	Qsox2	BC030934|Qscn6l1|SOXN	quiescin Q6 sulfhydryl oxidase 2	protein-coding
unique_peak1-1958-25-9-1.53992181045774-2.70611768348013	chr14	104715758	104716164	+	0	NA	Intergenic	Intergenic	151255	NM_011143	18996	Mm.246550	NM_011143		Pou4f1	Brn-3|Brn-3.0|Brn3|Brn3.0|Brn3a|E130119J07Rik	POU domain, class 4, transcription factor 1	protein-coding
common_peak2-23293-10-13--0.450939577048835-0.386243247519795	chr15	31568284	31568852	+	0	NA	Intergenic	Intergenic	36697	NM_026546	68073	Mm.119185	NM_026546	ENSMUSG00000039065	Fam173b	A930016P21Rik|AA987072	family with sequence similarity 173, member B	protein-coding
common_peak1-13992-19-25--0.297752391479405-0.376654945067947	chr2	103484731	103485739	+	0	NA	intron (NM_178890, intron 1 of 16)	ID_B1|SINE|B4	78768	NM_178890	99382	Mm.35850	NM_178890	ENSMUSG00000032724	Abtb2	AW539457|BPOZ-2	ankyrin repeat and BTB (POZ) domain containing 2	protein-coding
common_peak2-30947-147-228-0.0662651385857442-0.367851854606122	chr8	23165291	23168867	+	0	NA	intron (NM_007511, intron 1 of 20)	MIRb|SINE|MIR	3467	NM_007511	11979	Mm.87854	NM_007511	ENSMUSG00000006567	Atp7b	Atp7a|WND|tx	ATPase, Cu++ transporting, beta polypeptide	protein-coding
common_peak1-16824-73-76-0.425608465730321-1.18877383208862	chr6	49073137	49074736	+	0	NA	intron (NM_023670, intron 5 of 14)	L1VL2|LINE|L1	50142	NM_029353	75593	Mm.439947	NM_029353	ENSMUSG00000029815	Malsu1	2410003K15Rik|Matsu1	mitochondrial assembly of ribosomal large subunit 1	protein-coding
common_peak2-26878-13-8-0.608547029195456-0.660903317613904	chr2	156475456	156475992	+	0	NA	intron (NM_001277187, intron 1 of 11)	intron (NM_001277187, intron 1 of 11)	36291	NM_001277186	228836	Mm.22094	NM_146128	ENSMUSG00000061689	Dlgap4	AI225853|BC024558|DAP-4|DAP4|SAPAP-4|Sapap4|WBP16	discs, large homolog-associated protein 4 (Drosophila)	protein-coding
common_peak2-21286-5-5--0.289342836727009-0.909929411522249	chr11	70578242	70578653	+	0	NA	intron (NM_177565, intron 1 of 1)	intron (NM_177565, intron 1 of 1)	498	NM_177565	193043	Mm.40966	NM_177565	ENSMUSG00000043602	Zfp3	AI854635|B230309J24|Fnp-1|Zfp-3	zinc finger protein 3	protein-coding
common_peak2-24088-9-13--0.617741515653384-0.459837087125828	chr16	31599227	31599741	+	0	NA	Intergenic	Intergenic	-64045	NM_001252435	13383	Mm.382	NM_007862	ENSMUSG00000022770	Dlg1	B130052P05Rik|Dlgh1|E-dlg/SAP97|SAP-97|SAP97|mKIAA4187	discs, large homolog 1 (Drosophila)	protein-coding
unique_peak1-1859-8-2-1.42025991722641-1.65811743852845	chr14	54187174	54187603	+	0	NA	Intergenic	MMERGLN-int|LTR|ERV1	-98227	NM_001205242	100568452	Mm.213248	NM_001205242		A430107P09Rik	Va10	RIKEN cDNA A430107P09 gene	protein-coding
common_peak1-15649-8-11--0.579740082773585-1.14218153353838	chr4	135353599	135354083	+	0	NA	intron (NM_001085509, intron 24 of 36)	intron (NM_001085509, intron 24 of 36)	38211	NM_001085509	242702	Mm.318639	NM_001085509	ENSMUSG00000037139	Myom3	8430427K15Rik|Gm434	myomesin family, member 3	protein-coding
unique_peak1-4588-9-2-1.60465090568306-1.87199725847353	chr3	58255027	58255501	+	0	NA	intron (NM_001081229, intron 2 of 3)	intron (NM_001081229, intron 2 of 3)	35653	NM_001081229	72033	Mm.218409	NM_028067	ENSMUSG00000027806	Tsc22d2	1810043J12Rik|5530402M19Rik	TSC22 domain family, member 2	protein-coding
unique_peak2-38520-1-8--2.79698201165906-2.05605744720049	chr7	45643166	45643538	+	0	NA	Intergenic	Intergenic	876552	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak2-35887-0-7--3.84013093047421-1.80617997398389	chr18	87933782	87934228	+	0	NA	Intergenic	MamRep605|Unknown|Unknown	1051565	NM_172633	12405	Mm.70775	NM_172633	ENSMUSG00000024647	Cbln2	6330593N19Rik|A730004O05	cerebellin 2 precursor protein	protein-coding
unique_peak2-37657-6-7--0.434601889619698-0.97990265578305	chr5	92140513	92140996	+	0	NA	Intergenic	Intergenic	55572	NR_045383	73452	Mm.396233	NR_045383		1700063O14Rik	-	RIKEN cDNA 1700063O14 gene	ncRNA
common_peak1-8534-7-5-0.214128329577033-1.01466476204226	chr10	89595977	89596492	+	0	NA	intron (NM_001128086, intron 8 of 24)	intron (NM_001128086, intron 8 of 24)	259980	NM_001128086	77531	Mm.440605	NM_181398	ENSMUSG00000058589	Anks1b	AIDA-1b|C030032C09Rik|E530015N03Rik|ENSMUSG00000078431|Gm10937|Gm1555	ankyrin repeat and sterile alpha motif domain containing 1B	protein-coding
common_peak2-27251-69-64-0.572774634230278-1.78026981523164	chr3	53863193	53864173	+	0	NA	Intergenic	Intergenic	-96296	NM_001253683	22066	Mm.10100	NM_016984	ENSMUSG00000027748	Trpc4	CCE1|STRPC4|Trp4|Trrp4	transient receptor potential cation channel, subfamily C, member 4	protein-coding
unique_peak2-39934-4-7--1.02346051385325-1.09384600808989	chrX	109013584	109014038	+	0	NA	Intergenic	Intergenic	-193318	NM_031382	83556	Mm.190608	NM_031382	ENSMUSG00000034555	Tex16	OTTMUSG00000018437	testis expressed gene 16	protein-coding
unique_peak2-38584-3-6--1.22133801201688-1.08602067057793	chr7	67740505	67740936	+	0	NA	Intergenic	ORR1D2-int|LTR|MaLR	-455615	NM_001082962	20646	Mm.274995	NM_013670	ENSMUSG00000000948	Snrpn	2410045I01Rik|HCERN3|Peg4|Pwcr1|SMN	small nuclear ribonucleoprotein N	protein-coding
unique_peak1-782-22-7-1.6472841050874-2.63337704757512	chr11	8469609	8470584	+	0	NA	intron (NM_001083587, intron 4 of 30)	intron (NM_001083587, intron 4 of 30)	94442	NM_001083587	319939	Mm.337820	NM_001083587	ENSMUSG00000020422	Tns3	BC023928|F830010I22Rik|TEM6|Tens1	tensin 3	protein-coding
common_peak1-16954-56-46-0.681006973761606-1.82508467444514	chr6	84600707	84602640	+	0	NA	intron (NM_177077, intron 20 of 21)	RSINE1|SINE|B4	-57771	NM_001177713	232174	Mm.255246	NM_175475	ENSMUSG00000063415	Cyp26b1	CP26|P450RAI-2	cytochrome P450, family 26, subfamily b, polypeptide 1	protein-coding
unique_peak2-35155-7-7--0.200909169701811-0.97990265578305	chr16	33697822	33698403	+	0	NA	intron (NM_175256, intron 1 of 14)	intron (NM_175256, intron 1 of 14)	13560	NM_175256	77446	Mm.245741	NM_172934	ENSMUSG00000075254	Heg1	4632417D23Rik|5530401I02Rik|9530025L16Rik|BC038614|Gm629|OTTMUSG00000027315	HEG homolog 1 (zebrafish)	protein-coding
common_peak2-26808-10-5-0.771452844287613-1.33892459842472	chr2	150768766	150769192	+	0	NA	intron (NM_207204, intron 19 of 23)	intron (NM_207204, intron 19 of 23)	33649	NM_001163476	69270	Mm.271603	NM_027014	ENSMUSG00000027454	Gins1	2810418N01Rik|Gins4|PSF1|mKIAA0186	GINS complex subunit 1 (Psf1 homolog)	protein-coding
unique_peak1-3168-8-3-1.00522241794757-1.39487600375387	chr18	38634871	38635392	+	0	NA	Intergenic	B3A|SINE|B2	56502	NM_022996	65113	Mm.102496	NM_022996	ENSMUSG00000024425	Ndfip1	0610010M22Rik|N4wbp5	Nedd4 family interacting protein 1	protein-coding
unique_peak2-33704-5-6--0.511735258063458-0.947717972411649	chr11	108364514	108364911	+	0	NA	intron (NM_029606, intron 11 of 27)	intron (NM_029606, intron 11 of 27)	78132	NM_029606	76380	Mm.344071	NM_029586	ENSMUSG00000020728	Cep112	1700001M19Rik|1700029K01Rik|8430407H02Rik|AV043680|AV207351|Ccdc46|Macoco	centrosomal protein 112	protein-coding
common_peak1-13464-17-21--0.24113528043226-0.322753776620787	chr19	60811350	60812069	+	0	NA	Intergenic	Intergenic	-20181	NM_178421	332397	Mm.186390	NM_178421	ENSMUSG00000072437	Nanos1	-	nanos homolog 1 (Drosophila)	protein-coding
unique_peak1-1187-12-1-2.64877598508764-3.36932189928148	chr11	101057246	101058038	+	0	NA	intron (NM_007970, intron 15 of 20)	intron (NM_007970, intron 15 of 20)	20211	NM_016782	53321	Mm.474527	NM_016782	ENSMUSG00000017167	Cntnap1	AI841080|Caspr|NCP1|Nrxn4|p190|shm	contactin associated protein-like 1	protein-coding
common_peak2-27601-108-158-0.0572940061237137-0.333974416276908	chr3	103057758	103059285	+	0	NA	Intergenic	Intergenic	-24695	NM_053170	94093	Mm.195036	NM_053170	ENSMUSG00000033014	Trim33	8030451N04Rik|AI413936|Ecto|Tif1g	tripartite motif-containing 33	protein-coding
unique_peak2-36772-2-4--1.23938235115068-0.931118710592187	chr3	68507834	68508232	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	12687	NM_008351	16159	Mm.103783	NM_008351	ENSMUSG00000027776	Il12a	IL-12p35|Il-12a|Ll12a|p35	interleukin 12a	protein-coding
unique_peak2-34505-5-7--0.704380336005853-1.01466476204226	chr14	47509973	47510206	+	0	NA	intron (NM_028966, intron 2 of 11)	intron (NM_028966, intron 2 of 11)	7449	NM_001037221	74480	Mm.214454	NM_028966	ENSMUSG00000021838	Samd4	1700024G08Rik|1700111L17Rik|4933436G17Rik|Samd4a|Smaug|Smaug1	sterile alpha motif domain containing 4	protein-coding
common_peak2-31147-9-12--0.510826311736872-0.394412252720706	chr8	41015101	41015708	+	0	NA	Intergenic	Intergenic	-287372	NM_001113326	20288	Mm.239291	NM_031195	ENSMUSG00000025044	Msr1	MRS-A|MSR|MSR-A|SR-AI|SR-AII|Scara1|Scvr	macrophage scavenger receptor 1	protein-coding
unique_peak2-37292-2-5--1.50241675698448-1.08602067057793	chr4	118911759	118912122	+	0	NA	intron (NM_019783, intron 5 of 14)	intron (NM_019783, intron 5 of 14)	5506	NM_001042411	56401	Mm.27961	NM_019782	ENSMUSG00000028641	Lepre1	2410024C15Rik|Gros1|P3H1	leprecan 1	protein-coding
common_peak1-8608-11-13--0.298661337805991-0.337263207250336	chr10	115816186	115816723	+	0	NA	intron (NM_029928, intron 30 of 31)	B2_Mm2|SINE|B2	-38723	NR_028107	67342	Mm.245800	NM_026098	ENSMUSG00000020164	Kcnmb4os1	1700058G18Rik	potassium large conductance calcium-activated channel, subfamily M, beta member 4, opposite strand 1	ncRNA
common_peak2-27913-6-8--0.60452689106201-1.03789460276074	chr4	8509867	8510375	+	0	NA	intron (NM_021518, intron 6 of 7)	intron (NM_021518, intron 6 of 7)	47330	NM_021518	59021	Mm.397471	NM_021518	ENSMUSG00000047187	Rab2a	9330148M11Rik|C80220|Rab2	RAB2A, member RAS oncogene family	protein-coding
unique_peak2-34255-7-7--0.200909169701811-0.97990265578305	chr13	62684489	62684892	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-24731	NM_001162911	77117	Mm.470091	NM_175252		Zfp934	6720457D02Rik	zinc finger protein 934	protein-coding
unique_peak2-34660-4-12--1.72390023199434-1.85743853830261	chr14	123662167	123662621	+	0	NA	Intergenic	Lx3C|LINE|L1	93986	NR_045144	380934	Mm.393838	NR_045143		AA536875	Gm1591	expressed sequence AA536875	ncRNA
common_peak1-10619-11-10-0.0492619656143161-0.31137425193576	chr14	34309794	34310375	+	0	NA	Intergenic	Intergenic	-49740	NM_016700	26419	Mm.21495	NM_016700	ENSMUSG00000021936	Mapk8	AI849689|JNK|JNK1|Prkm8|SAPK1	mitogen-activated protein kinase 8	protein-coding
unique_peak2-37555-8-21--1.45420920068973-1.61268301619756	chr5	31636421	31637246	+	0	NA	intron (NR_105788, intron 7 of 7)	intron (NR_105788, intron 7 of 7)	36879	NM_144909	231103	Mm.100043	NM_144909	ENSMUSG00000059434	Gckr	GKRP	glucokinase regulatory protein	protein-coding
unique_peak2-38362-4-12--1.72390023199434-1.85743853830261	chr7	4526667	4527168	+	0	NA	intron (NM_207270, intron 6 of 19)	intron (NM_207270, intron 6 of 19)	28726	NM_207270	545902	Mm.188925	NM_207270	ENSMUSG00000035429	Ptprh	sap-1	protein tyrosine phosphatase, receptor type, H	protein-coding
common_peak1-17636-17-10-0.75886471956774-0.917676348953458	chr7	48916852	48917572	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-6172	NR_004441	75835	Mm.159597	NM_029460	ENSMUSG00000074164	Vmn2r-ps54	1700108E19Rik|4930562N12Rik|Casr-rs5|ENSMUSG00000078527|Gm10948|Gprc2a-rs5	vomeronasal 2, receptor, pseudogene 54	pseudo
common_peak1-9561-12-25--1.05166373305345-1.1381569562463	chr11	117809631	117810197	+	0	NA	Intergenic	Intergenic	20766	NM_007707	12702	Mm.3468	NM_007707	ENSMUSG00000053113	Socs3	Cis3|Cish3|EF-10|Ef10|SSI-3|Ssi3	suppressor of cytokine signaling 3	protein-coding
unique_peak1-3062-25-5-2.27688740462395-4.37015862955249	chr18	10461469	10462393	+	0	NA	intron (NM_001083628, intron 4 of 32)	intron (NM_001083628, intron 4 of 32)	136754	NM_001083628	381157	Mm.261535	NM_001083628	ENSMUSG00000042942	Greb1l	mKIAA4095	growth regulation by estrogen in breast cancer-like	protein-coding
common_peak1-12898-29-24-0.468433890840386-0.748982406290548	chr18	82522617	82523677	+	0	NA	Intergenic	L1_Mus2|LINE|L1	53022	NM_008082	14427	Mm.6219	NM_008082	ENSMUSG00000024553	Galr1	Galnr1	galanin receptor 1	protein-coding
common_peak2-27887-17-34--0.910986678739929-1.23560027455358	chr4	129810358	129811220	+	0	NA	intron (NM_001163027, intron 7 of 8)	intron (NM_001163027, intron 7 of 8)	5006	NM_001163027	230777	Mm.246595	NM_198959	ENSMUSG00000028778	Hcrtr1	Ox1r	hypocretin (orexin) receptor 1	protein-coding
common_peak2-26604-9-12--0.510826311736872-0.394412252720706	chr2	113640746	113641285	+	0	NA	intron (NM_009162, intron 2 of 5)	intron (NM_009162, intron 2 of 5)	28233	NM_009162	20394	Mm.4836	NM_009162	ENSMUSG00000023236	Scg5	7B2|AI325031|Sgne-1|Sgne1	secretogranin V	protein-coding
common_peak2-25558-14-19--0.422711934529718-0.403453972741636	chr19	6306247	6306847	+	0	NA	promoter-TSS (NM_001033342)	promoter-TSS (NM_001033342)	90	NM_001033342	240505	Mm.329622	NM_001033342	ENSMUSG00000024769	Cdc42bpg	BC046418|MRCKgamma	CDC42 binding protein kinase gamma (DMPK-like)	protein-coding
common_peak2-27892-16-25--0.58217607587303-0.633951497070961	chr4	139574725	139575764	+	0	NA	Intergenic	MERVL_2A-int|LTR|ERVL	-51303	NM_173427	242721	Mm.60400	NM_173427	ENSMUSG00000078234	Klhdc7a	B230308G19Rik	kelch domain containing 7A	protein-coding
unique_peak1-2784-8-6-0.197867495889966-1.03789460276074	chr17	12095570	12096096	+	0	NA	intron (NM_016694, intron 9 of 11)	intron (NM_016694, intron 9 of 11)	-19778	NR_045808	52027	Mm.442257	NR_045808		D17Ertd648e	-	DNA segment, Chr 17, ERATO Doi 648, expressed	ncRNA
common_peak2-31336-12-8-0.478850983645327-0.562038191119709	chr8	83715770	83716207	+	0	NA	Intergenic	MMERVK10C-int|LTR|ERVK	-150473	NM_001024617	234515	Mm.324468	NM_001024617	ENSMUSG00000037940	Inpp4b	E130107I17Rik	inositol polyphosphate-4-phosphatase, type II	protein-coding
common_peak2-20642-9-15--0.81038659359578-0.630231561310125	chr10	80960233	80960869	+	0	NA	TTS (NM_010102)	TTS (NM_010102)	-1443	NM_134009	103425	Mm.302791	NM_134009	ENSMUSG00000020238	Ncln	3100002P13Rik|AW120537	nicalin homolog (zebrafish)	protein-coding
common_peak1-9421-16-12-0.417823924126969-0.489164546851866	chr11	101278413	101279120	+	0	NA	promoter-TSS (NM_144829)	promoter-TSS (NM_144829)	-19	NM_144829	69684	Mm.146283	NM_144829	ENSMUSG00000075528	Aarsd1	1110069E20Rik|2310044P18Rik|AA589600|AlaX|AlaXp-II	alanyl-tRNA synthetase domain containing 1	protein-coding
common_peak1-9895-30-27-0.362320487434269-0.581176766834141	chr12	85959932	85960962	+	0	NA	Intergenic	Intergenic	-2031	NM_008992	19300	Mm.229109	NM_008992	ENSMUSG00000021240	Abcd4	P69r|P70R|Pxmp1l	ATP-binding cassette, sub-family D (ALD), member 4	protein-coding
common_peak1-17425-15-9-0.690236655668294-0.732381977911291	chr7	12949859	12950545	+	0	NA	Intergenic	Lx5|LINE|L1	-2089	NM_134233	171267	Mm.434341	NM_134233	ENSMUSG00000066803	Vmn1r84	V1rg11	vomeronasal 1 receptor 84	protein-coding
common_peak2-24140-12-20--0.743541437691122-0.625923329873571	chr16	36828291	36828886	+	0	NA	promoter-TSS (NM_001113401)	promoter-TSS (NM_001113401)	102	NM_177128	320299	Mm.222934	NM_177128	ENSMUSG00000022837	Iqcb1	6820449I09Rik|AV128382|NPHP5	IQ calmodulin-binding motif containing 1	protein-coding
common_peak2-29569-44-66--0.244196355889237-0.44415727438309	chr6	47767577	47768723	+	0	NA	Intergenic	Intergenic	-4639	NM_009787	12304	Mm.2442	NM_009787	ENSMUSG00000025823	Pdia4	AI987846|Cai|ERp-72|Erp72	protein disulfide isomerase associated 4	protein-coding
unique_peak2-36230-3-6--1.22133801201688-1.08602067057793	chr2	35756817	35757252	+	0	NA	intron (NM_029774, intron 4 of 9)	intron (NM_029774, intron 4 of 9)	78110	NM_029774	74410	Mm.21591	NM_028921	ENSMUSG00000026885	Ttll11	4932702F08Rik|4933424A20Rik|AU043211|D2Ertd624e	tubulin tyrosine ligase-like family, member 11	protein-coding
common_peak2-25485-31-19-0.903310575925761-1.57996244908225	chr19	5015870	5016390	+	0	NA	Intergenic	Intergenic	-7876	NM_007854	13340	Mm.4930	NM_007854	ENSMUSG00000024891	Slc29a2	Der12|Ent2|Hnp36	solute carrier family 29 (nucleoside transporters), member 2	protein-coding
unique_peak2-37282-2-7--1.91745425626332-1.45399745587252	chr4	117182688	117183064	+	0	NA	Intergenic	ID_B1|SINE|B4	-13356	NM_025739	66743	Mm.318331	NM_025739	ENSMUSG00000028677	Rnf220	4732477A13|4931406I20Rik|5730503K05Rik|AV302541	ring finger protein 220	protein-coding
unique_peak2-38904-6-9--0.75652998450706-1.11707584880836	chr8	13288256	13288733	+	0	NA	promoter-TSS (NM_001024504)	promoter-TSS (NM_001024504)	-368	NM_001042650	102323	Mm.368890	NM_001024504	ENSMUSG00000038506	Dcun1d2	AW495713|mFLJ10704	DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae)	protein-coding
unique_peak2-34402-6-7--0.434601889619698-0.97990265578305	chr14	7819407	7819823	+	0	NA	Intergenic	ORR1A3|LTR|MaLR	40348	NM_001164727	100038847	Mm.443041	NM_001164727	ENSMUSG00000093985	Gm10406	ENSMUSG00000072735	predicted gene 10406	protein-coding
unique_peak2-39474-3-6--1.22133801201688-1.08602067057793	chr9	56864192	56864587	+	0	NA	intron (NM_019651, intron 1 of 12)	RMER15|LTR|ERVL	21614	NM_019651	56294	Mm.325643	NM_019651	ENSMUSG00000032290	Ptpn9	MEG2	protein tyrosine phosphatase, non-receptor type 9	protein-coding
unique_peak2-33055-4-5--0.608423014574403-0.909929411522249	chr10	76237315	76237732	+	0	NA	intron (NM_021568, intron 11 of 15)	L1M5|LINE|L1	-48734	NM_009933	12833	Mm.2509	NM_009933	ENSMUSG00000001119	Col6a1	AI747156|Col6a-1	collagen, type VI, alpha 1	protein-coding
common_peak2-21365-16-11-0.533301141546906-0.58239619684445	chr11	78183227	78183513	+	0	NA	intron (NM_008238, intron 3 of 8)	intron (NM_008238, intron 3 of 8)	16740	NM_008238	15218	Mm.4496	NM_008238	ENSMUSG00000002057	Foxn1	D11Bhm185e|Fkh19|HFH-11|Hfh11|Whn|nu|nude	forkhead box N1	protein-coding
common_peak2-23037-38-81--0.786099345319553-2.15469273091327	chr14	67716000	67717504	+	0	NA	Intergenic	Intergenic	-25444	NM_001205188	71978	Mm.273997	NM_028032	ENSMUSG00000022052	Ppp2r2a	2410004D02Rik|mKIAA1541	protein phosphatase 2, regulatory subunit B, alpha	protein-coding
common_peak1-12826-23-22-0.198205548452068-0.373496418836697	chr18	69343800	69344655	+	0	NA	Intergenic	Intergenic	-159919	NM_013685	21413	Mm.4269	NM_013685	ENSMUSG00000053477	Tcf4	5730422P05Rik|ASP-I2|E2-2|E2.2|ITF-2|ITF-2b|ITF2|ME2|MITF-2A|MITF-2B|SEF-2|SEF2|SEF2-1|TFE|Tcf-4|bHLHb19	transcription factor 4	protein-coding
common_peak1-10428-21-30--0.384707045120639-0.446094173747089	chr13	100730016	100731001	+	0	NA	intron (NM_030026, intron 12 of 16)	intron (NM_030026, intron 12 of 16)	55086	NM_030026	78038	Mm.137327	NM_030026	ENSMUSG00000021646	Mccc2	4930552N12Rik|MCCB	methylcrotonoyl-Coenzyme A carboxylase 2 (beta)	protein-coding
unique_peak2-32930-7-10--0.660340788339108-1.12966497611638	chr10	27984443	27984930	+	0	NA	intron (NM_008983, intron 3 of 31)	intron (NM_008983, intron 3 of 31)	190060	NM_008983	19272	Mm.332303	NM_008983	ENSMUSG00000019889	Ptprk	AI853699|PTPk|RPTPkappa	protein tyrosine phosphatase, receptor type, K	protein-coding
unique_peak1-4173-8-1-2.00522241794757-2.05605744720049	chr2	113421490	113421986	+	0	NA	intron (NM_001285459, intron 6 of 16)	intron (NM_001285459, intron 6 of 16)	-103509	NM_001287818	14260	Mm.4938	NM_010230	ENSMUSG00000044042	Fmn1	Fmn|ld	formin 1	protein-coding
common_peak2-21542-43-47-0.197600684802547-0.437419278836636	chr11	95836548	95837812	+	0	NA	intron (NM_009951, intron 4 of 14)	B2_Mm2|SINE|B2	-12483	NR_037223	100526468		NR_037223	miRBase:MI0014025	Mir3063	mmu-mir-3063	microRNA 3063	ncRNA
common_peak2-20135-12-11-0.0638134843664826-0.337263207250336	chr1	166045484	166046024	+	0	NA	intron (NM_011347, intron 1 of 15)	PB1D10|SINE|Alu	359	NM_011347	20344	Mm.3337	NM_011347	ENSMUSG00000026580	Selp	CD62P|GMP-140|Grmp|LECAM3|PADGEM	selectin, platelet	protein-coding
common_peak2-30196-34-72--0.807756031878752-2.03570638876314	chr7	45153577	45155147	+	0	NA	Intergenic	Intergenic	1365542	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak1-13355-69-84-0.185751511121031-0.503955412545943	chr19	45056966	45059349	+	0	NA	3' UTR (NM_001081225, exon 20 of 20)	3' UTR (NM_001081225, exon 20 of 20)	883	NR_040294	73894	Mm.491408	NR_040294		4930414N06Rik	-	RIKEN cDNA 4930414N06 gene	ncRNA
common_peak1-17114-25-24-0.217993715570381-0.403610417161433	chr6	114642860	114643828	+	0	NA	intron (NM_001253718, intron 8 of 19)	MTD|LTR|MaLR	50225	NM_001253717	74244	Mm.275332	NM_028835	ENSMUSG00000030314	Atg7	1810013K23Rik|Agp7|Apg7l|Atg7l|Gm21553	autophagy related 7	protein-coding
common_peak2-20920-16-26--0.636623859895407-0.713114929964887	chr11	6006181	6006887	+	0	NA	3' UTR (NM_173748, exon 6 of 6)	3' UTR (NM_173748, exon 6 of 6)	-40783	NM_007595	12323	Mm.439733	NM_007595	ENSMUSG00000057897	Camk2b	Camk2d	calcium/calmodulin-dependent protein kinase II, beta	protein-coding
common_peak1-14229-106-95-0.752804354284563-4.13810104351114	chr2	152736273	152738858	+	0	NA	intron (NM_001081044, intron 1 of 11)	intron (NM_001081044, intron 1 of 11)	477	NM_001081044	228785	Mm.250604	NM_001081044	ENSMUSG00000027470	Mylk2	9830004H17Rik|BB138278	myosin, light polypeptide kinase 2, skeletal muscle	protein-coding
common_peak1-11211-47-29-1.02795082915803-2.82656563060959	chr15	78867834	78869308	+	0	NA	3' UTR (NM_013847, exon 9 of 9)	3' UTR (NM_013847, exon 9 of 9)	-3744	NM_015738	14429	Mm.390805	NM_015738	ENSMUSG00000006378	Galr3	Galnr3	galanin receptor 3	protein-coding
common_peak1-11694-16-9-0.796335547380699-0.844317084070804	chr16	30790238	30791016	+	0	NA	Intergenic	Intergenic	190818	NM_177632	224093	Mm.28244	NM_177632	ENSMUSG00000046546	Fam43a	Tuf1	family with sequence similarity 43, member A	protein-coding
unique_peak2-34805-7-11--0.785871670422967-1.21681515183528	chr15	73148151	73148714	+	0	NA	intron (NM_007982, intron 7 of 31)	Lx6|LINE|L1	105189	NM_007982	14083	Mm.254494	NM_007982	ENSMUSG00000022607	Ptk2	FAK|FRNK|Fadk|mKIAA4203|p125FAK	PTK2 protein tyrosine kinase 2	protein-coding
common_peak2-21693-31-32-0.18084455145467-0.379775532323848	chr11	106159369	106160725	+	0	NA	Intergenic	Intergenic	3163	NM_008117	14599	Mm.343934	NM_008117	ENSMUSG00000020713	Gh	Gh1	growth hormone	protein-coding
unique_peak2-35487-5-6--0.511735258063458-0.947717972411649	chr17	45767776	45768208	+	0	NA	intron (NM_001013767, intron 20 of 21)	intron (NM_001013767, intron 20 of 21)	28266	NM_001013767	268958	Mm.426026	NM_001013767	ENSMUSG00000058626	Capn11	-	calpain 11	protein-coding
common_peak2-32193-44-51-0.121453116427443-0.373449689110125	chr9	119001456	119002854	+	0	NA	intron (NR_121571, intron 1 of 14)	intron (NR_121571, intron 1 of 14)	465	NR_121571	18799	Mm.23963	NM_019676	ENSMUSG00000010660	Plcd1	AW212592|C79986	phospholipase C, delta 1	protein-coding
unique_peak1-2223-14-1-2.89921616035764-3.91338994363176	chr15	74733915	74734584	+	0	NA	Intergenic	Intergenic	-22115	NM_025929	67038	Mm.154566	NM_025929	ENSMUSG00000063522	2010109I03Rik	-	RIKEN cDNA 2010109I03 gene	protein-coding
common_peak2-26528-29-50--0.560135261356384-0.878852710448088	chr2	91202112	91203504	+	0	NA	intron (NM_175123, intron 3 of 8)	intron (NM_175123, intron 3 of 8)	81991	NM_175123	228356	Mm.386861	NM_175123	ENSMUSG00000040591	1110051M20Rik	AI586322	RIKEN cDNA 1110051M20 gene	protein-coding
common_peak1-18579-42-25-1.04188960972609-2.66762268841486	chr8	105990622	105991856	+	0	NA	Intergenic	Intergenic	-119805	NR_036588	69794	Mm.396139	NR_036588		1600027J07Rik	-	RIKEN cDNA 1600027J07 gene	ncRNA
common_peak2-25232-9-7-0.18961340640422-1.05908390183068	chr18	64071544	64071993	+	0	NA	intron (NM_001014981, intron 22 of 27)	L1Md_T|LINE|L1	203419	NM_001014981	104082	Mm.30850	NM_001014981	ENSMUSG00000040560	Wdr7	AI462727|TRAG|mKIAA0541	WD repeat domain 7	protein-coding
unique_peak2-39306-6-10--0.894033508256995-1.21398586181642	chr8	124231847	124232321	+	0	NA	Intergenic	Intergenic	-22375	NM_020605	57340	Mm.306870	NM_020605	ENSMUSG00000025318	Jph3	JP-3|Jp3	junctophilin 3	protein-coding
unique_peak1-4976-24-4-2.47128180788035-4.69785539356838	chr4	108459858	108460806	+	0	NA	Intergenic	(TTTTG)n|Simple_repeat|Simple_repeat	45857	NM_027453	70533	Mm.379178	NM_027453	ENSMUSG00000028568	Btf3l4	4632412E09Rik|5730434I03Rik|AI316863|AU022207|AW552446	basic transcription factor 3-like 4	protein-coding
unique_peak1-1987-16-2-2.53330114154691-3.78760380288747	chr15	10780170	10780915	+	0	NA	Intergenic	L1Md_F2|LINE|L1	21736	NR_040357	100502601	Mm.399434	NR_040357		Gm19276	-	predicted gene, 19276	ncRNA
common_peak2-32216-6-10--0.894033508256995-1.21398586181642	chr9	121815471	121815951	+	0	NA	intron (NM_001276719, intron 3 of 3)	intron (NM_001276719, intron 3 of 3)	8238	NM_021609	59289	Mm.258105	NM_021609	ENSMUSG00000044534	Ackr2	AI464239|CCR10|CCR9|Ccbp2|Cmkbr9|D6	atypical chemokine receptor 2	protein-coding
common_peak2-20591-19-36--0.806766038967264-1.16836819221353	chr10	79097080	79097749	+	0	NA	intron (NM_001024539, intron 1 of 12)	L2b|LINE|L2	3249	NM_001024539	216148	Mm.39424	NM_001024539	ENSMUSG00000020312	Shc2	6720466E06|SCK|ShcB|Sli	SHC (Src homology 2 domain containing) transforming protein 2	protein-coding
unique_peak2-32694-9-11--0.395349094316936-0.344532117358383	chr1	143772977	143773646	+	0	NA	Intergenic	Intergenic	-1220332	NR_040604	75910	Mm.483845	NR_040604		4930590L20Rik	-	RIKEN cDNA 4930590L20 gene	ncRNA
unique_peak2-32920-0-4--3.16205902536157-1.10720996964787	chr10	24596358	24596710	+	0	NA	intron (NM_001166416, intron 6 of 29)	L1MA8|LINE|L1	6742	NM_027347	70208	Mm.28020	NM_027347	ENSMUSG00000019984	Med23	130kDa|3000002A17Rik|Crsp3|ESTM7|Sur2|X83317|mKIAA1216	mediator complex subunit 23	protein-coding
common_peak2-24103-22-32--0.397110014271049-0.488172498216822	chr16	32643814	32644792	+	0	NA	promoter-TSS (NM_016788)	promoter-TSS (NM_016788)	-426	NM_001110147	51789	Mm.251115	NM_016788	ENSMUSG00000022791	Tnk2	Ack|Ack-1|Ack1|Cdgip|Pyk1	tyrosine kinase, non-receptor, 2	protein-coding
common_peak2-23011-12-7-0.648775985087639-0.697979855752659	chr14	62759668	62760189	+	0	NA	Intergenic	MTE-int|LTR|MaLR	151888	NM_173419	239133	Mm.127330	NM_173419	ENSMUSG00000048281	Dleu7	BC038059	deleted in lymphocytic leukemia, 7	protein-coding
common_peak1-18088-23-22-0.198205548452068-0.373496418836697	chr8	94600888	94601837	+	0	NA	Intergenic	Intergenic	-275809	NM_008393	16373	Mm.238044	NM_008393	ENSMUSG00000031734	Irx3	AI894186	Iroquois related homeobox 3	protein-coding
common_peak2-21095-94-93-0.575000716171679-2.37392859677855	chr11	51688706	51689744	+	0	NA	Intergenic	MLT1C|LTR|MaLR	-18242	NM_199299	76901	Mm.259996	NM_199299	ENSMUSG00000020387	Jade2	1200017K05Rik|AI480685|Phf15|mKIAA0239	jade family PHD finger 2	protein-coding
common_peak2-20048-11-15--0.491306415748387-0.435191258261915	chr1	149846864	149847266	+	0	NA	Intergenic	Lx8|LINE|L1	1502248	NM_001145807	215378	Mm.441817	NM_153539	ENSMUSG00000035131	Brinp3	B830045N13Rik|Fam5c	bone morphogenetic protein/retinoic acid inducible neural specific 3	protein-coding
unique_peak1-4849-9-3-1.18961340640422-1.57096726280955	chr3	153909782	153910261	+	0	NA	intron (NM_001081263, intron 9 of 21)	intron (NM_001081263, intron 9 of 21)	83503	NM_010713	16875	Mm.15530	NM_010713	ENSMUSG00000096225	Lhx8	L3|Lhx7	LIM homeobox protein 8	protein-coding
unique_peak1-666-12-3-1.64877598508764-2.36932189928148	chr10	60815238	60815694	+	0	NA	intron (NM_013753, intron 3 of 19)	intron (NM_013753, intron 3 of 19)	30805	NM_013753	27355	Mm.269699	NM_013753	ENSMUSG00000020092	Pald1	MMPAL|Pald|mKIAA1274	phosphatase domain containing, paladin 1	protein-coding
unique_peak2-39876-6-7--0.434601889619698-0.97990265578305	chrX	74254023	74254477	+	0	NA	Intergenic	Intergenic	-405987	NM_001201395	74987	Mm.107996	NM_001201395	ENSMUSG00000079525	4930468A15Rik	-	RIKEN cDNA 4930468A15 gene	protein-coding
unique_peak2-34813-10-25--1.34402437313232-1.74319850844462	chr15	74678819	74679969	+	0	NA	Intergenic	Intergenic	-7321	NM_001033229	110115	Mm.322606	NM_001033229	ENSMUSG00000075604	Cyp11b1	AA389061|CPN1|Cyp11b|Cyp11b-1|FHI	cytochrome P450, family 11, subfamily b, polypeptide 1	protein-coding
common_peak1-10958-9-21--1.26981821223308-1.37307999835977	chr15	25940874	25941373	+	0	NA	Intergenic	Intergenic	27002	NM_144523	52521	Mm.29145	NM_144523	ENSMUSG00000052253	Zfp622	1110033B05Rik|D15Ertd806e|ZPR9|Znf622	zinc finger protein 622	protein-coding
common_peak2-20512-9-5-0.604650905683064-1.21398586181642	chr10	59921198	59921647	+	0	NA	intron (NR_045556, intron 14 of 68)	URR1A|DNA|MER1_type	58948	NM_001164374	100302688	Mm.444135	NM_001164374	ENSMUSG00000090439	Gm17455	-	predicted gene, 17455	protein-coding
common_peak1-19191-25-12-1.16141018720401-1.87883858401928	chr9	99700244	99701335	+	0	NA	Intergenic	Intergenic	75800	NM_011440	20669	Mm.261595	NM_011440	ENSMUSG00000053747	Sox14	-	SRY (sex determining region Y)-box 14	protein-coding
unique_peak2-34730-2-15--2.91745425626332-3.28500101358144	chr15	38301250	38302101	+	0	NA	Intergenic	Intergenic	-71209	NM_001289471	21847	Mm.4292	NM_013692	ENSMUSG00000037465	Klf10	AI115143|EGR[a]|Egral|Gdnfif|TIEG-1|Tieg|Tieg1|mGIF	Kruppel-like factor 10	protein-coding
common_peak1-16976-28-13-1.24560419776386-2.25377313481387	chr6	86595442	86596514	+	0	NA	Intergenic	B1_Mur2|SINE|Alu	17810	NM_026414	67855	Mm.183043	NM_026414	ENSMUSG00000033508	Asprv1	2300003P22Rik|AA986851|SASP|SASPase|Taps	aspartic peptidase, retroviral-like 1	protein-coding
unique_peak1-7379-9-5-0.604650905683064-1.21398586181642	chrX	73999322	73999804	+	0	NA	Intergenic	Intergenic	-151300	NM_001201395	74987	Mm.107996	NM_001201395	ENSMUSG00000079525	4930468A15Rik	-	RIKEN cDNA 4930468A15 gene	protein-coding
unique_peak1-1703-26-6-2.12054417010086-4.0937649558367	chr13	91976008	91977104	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-29255	NM_145453	69085	Mm.52356	NM_145453	ENSMUSG00000021621	Zcchc9	1810019C21Rik	zinc finger, CCHC domain containing 9	protein-coding
unique_peak2-36547-6-12--1.13504160776079-1.45089835786865	chr2	165868692	165869234	+	0	NA	intron (NM_008679, intron 2 of 22)	(CA)n|Simple_repeat|Simple_repeat	50826	NM_008679	17979	Mm.469663	NM_008679	ENSMUSG00000027678	Ncoa3	2010305B15Rik|AW321064|Actr|Aib1|KAT13B|Rac3|Src3|Tram-1|Tram1|bHLHe42|p/Cip|pCip	nuclear receptor coactivator 3	protein-coding
common_peak2-30303-19-25--0.297752391479405-0.376654945067947	chr7	19750312	19751127	+	0	NA	intron (NM_001080815, intron 1 of 13)	intron (NM_001080815, intron 1 of 13)	757	NM_001080815	381853	Mm.333633	NM_001080815	ENSMUSG00000030406	Gipr	GIP-R|Gm1081|Gm160	gastric inhibitory polypeptide receptor	protein-coding
unique_peak1-3253-10-3-1.35641534500877-1.75805390616669	chr18	65072917	65073438	+	0	NA	intron (NM_001114386, intron 1 of 30)	intron (NM_001114386, intron 1 of 30)	25767	NM_001114386	83814	Mm.98668	NM_031881	ENSMUSG00000024589	Nedd4l	1300012C07Rik|Nedd4-2|Nedd4b	neural precursor cell expressed, developmentally down-regulated gene 4-like	protein-coding
unique_peak2-36430-15-21--0.447266868081641-0.448200956659578	chr2	130283763	130284687	+	0	NA	intron (NM_008980, intron 1 of 21)	B4|SINE|B4	8211	NM_001163688	19262	Mm.224246	NM_008980	ENSMUSG00000027303	Ptpra	Ptpa|Ptpalpha|Rptpalpha|Rptra|Rptralpha	protein tyrosine phosphatase, receptor type, A	protein-coding
unique_peak1-7134-15-4-1.69023665566829-1.97518968347063	chr9	54638629	54639282	+	0	NA	Intergenic	RSINE1|SINE|B4	26400	NM_013496	12903	Mm.34797	NM_013496	ENSMUSG00000032291	Crabp1	AI326249|CRABP-I|Crabp-1|CrabpI|Rbp-5	cellular retinoic acid binding protein I	protein-coding
unique_peak2-33410-7-9--0.522837264589173-1.05908390183068	chr11	55469729	55470153	+	0	NA	Intergenic	Intergenic	-48241	NM_020492	14654	Mm.89320	NM_020492		Glra1	nmf11|oscillator|ot|spasmodic|spd	glycine receptor, alpha 1 subunit	protein-coding
common_peak1-12455-13-18--0.469455482805817-0.409888142029227	chr17	83576928	83577685	+	0	NA	Intergenic	B3|SINE|B2	-37317	NM_134117	106522	Mm.311974	NM_134117	ENSMUSG00000024247	Pkdcc	AI115348|AW548124|Adtk1|ESTM17|MAd1|Sgk493|Vlk|X83346	protein kinase domain containing, cytoplasmic	protein-coding
common_peak2-24822-209-324-0.173523213553809-0.882455151362801	chr17	71001252	71003587	+	0	NA	intron (NM_001128180, intron 2 of 9)	(GGAGAA)n|Simple_repeat|Simple_repeat	91332	NM_001128181	224997	Mm.311840	NM_027712	ENSMUSG00000003279	Dlgap1	4933422O14Rik|9630002F18|AI845682|AI848168|BB075781|D17Bwg0511e|GKAP/SAPAP|GKPA/SAPAP|Gkap|Sapap1|mKIAA4162	discs, large (Drosophila) homolog-associated protein 1	protein-coding
unique_peak2-32714-6-12--1.13504160776079-1.45089835786865	chr1	155083665	155084208	+	0	NA	intron (NM_010683, intron 18 of 27)	L1MA5A|LINE|L1	-50359	NM_008485	16782	Mm.329272	NM_008485	ENSMUSG00000026479	Lamc2	AA589349	laminin, gamma 2	protein-coding
common_peak1-18592-21-41--0.822828157512525-1.27781945862486	chr8	106603255	106604208	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-21794	NM_009868	12562	Mm.21767	NM_009868	ENSMUSG00000031871	Cdh5	7B4|AA408225|Cd144|VE-Cad|VECD|VEcad|Vec	cadherin 5	protein-coding
common_peak2-23438-39-34-0.486478229974187-0.89292906939411	chr15	62327518	62328638	+	0	NA	Intergenic	Intergenic	-277072	NR_003523	67552	Mm.484027	NM_026230		H2afy3	4933432H23Rik	H2A histone family, member Y3	pseudo
common_peak2-30565-8-5-0.420259917226415-1.10484139239135	chr7	79315352	79315771	+	0	NA	intron (NM_001024703, intron 14 of 22)	intron (NM_001024703, intron 14 of 22)	135920	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding
common_peak1-7847-28-13-1.24560419776386-2.25377313481387	chr1	132099105	132100164	+	0	NA	intron (NM_172485, intron 26 of 27)	L1Md_A|LINE|L1	219942	NM_007827	13137	Mm.436759	NM_007827	ENSMUSG00000026401	Daf2	AI323748|Cd55b|Daf|Daf-TM|TM-DAF	decay accelerating factor 2	protein-coding
unique_peak1-4990-14-7-0.899216160357645-0.947446088118041	chr4	116165464	116166276	+	0	NA	Intergenic	Intergenic	-14284	NM_008389	16351	Mm.1350	NM_008389	ENSMUSG00000028696	Ipp	D4Jhu8|Mipp	IAP promoted placental gene	protein-coding
common_peak2-22912-12-11-0.0638134843664826-0.337263207250336	chr14	40948085	40948632	+	0	NA	Intergenic	L1Md_F2|LINE|L1	479407	NR_045936	73591	Mm.65499	NR_045936		1700109I08Rik	-	RIKEN cDNA 1700109I08 gene	ncRNA
unique_peak1-6521-11-3-1.50869358425161-1.95434855131066	chr7	119941130	119941843	+	0	NA	intron (NM_001166585, intron 1 of 10)	intron (NM_001166585, intron 1 of 10)	38588	NM_001166585	21676	Mm.24685	NM_009346	ENSMUSG00000055320	Tead1	2610024B07Rik|B230114H05Rik|Gtrgeo5|TEAD-1|TEF-1|Tcf13|mTEF-1	TEA domain family member 1	protein-coding
common_peak1-17173-86-151--0.272291719411232-0.791650489816042	chr6	120835853	120836894	+	0	NA	intron (NM_153516, intron 6 of 6)	B1F1|SINE|Alu	30465	NM_007544	12122	Mm.235081	NM_007544	ENSMUSG00000004446	Bid	2700049M22Rik|AI875481|AU022477	BH3 interacting domain death agonist	protein-coding
unique_peak1-6297-9-6-0.382258484346616-1.11707584880836	chr7	30121535	30122051	+	0	NA	intron (NM_001081028, intron 17 of 22)	intron (NM_001081028, intron 17 of 22)	32769	NM_013874	29861	Mm.101885	NM_013874	ENSMUSG00000030584	Dpf1	Neud4	D4, zinc and double PHD fingers family 1	protein-coding
unique_peak1-5487-9-0-3.18961340640422-3.01029995663981	chr5	131822608	131823135	+	0	NA	Intergenic	L1Md_A|LINE|L1	-39479	NM_145218	212996	Mm.299204	NM_145218		Wbscr17	AA388321|E330012B09Rik	Williams-Beuren syndrome chromosome region 17 homolog (human)	protein-coding
common_peak2-32253-13-21--0.680959587999529-0.607095980551316	chrX	7721487	7722274	+	0	NA	promoter-TSS (NR_033561)	promoter-TSS (NR_033561)	-673	NR_033561	70226	Mm.391639	NR_033561	ENSMUSG00000055188	Rbm3os	2900002K06Rik	RNA binding motif protein 3, opposite strand	ncRNA
common_peak2-19814-8-9--0.316705676939792-1.03275496310833	chr1	88462963	88463500	+	0	NA	intron (NM_008801, intron 1 of 4)	intron (NM_008801, intron 1 of 4)	15845	NM_008801	18582	Mm.12925	NM_008801	ENSMUSG00000026239	Pde6d	AI841218|PrBP/delta	phosphodiesterase 6D, cGMP-specific, rod, delta	protein-coding
common_peak2-29954-19-8-1.23276232521937-1.61268301619756	chr6	117880552	117881065	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	6545	NM_033648	108017	Mm.250392	NM_033648		Fxyd4	0610008I02Rik|AI267073|Chif	FXYD domain-containing ion transport regulator 4	protein-coding
common_peak1-16748-25-19-0.539921810457743-0.756750750680359	chr6	31517226	31518364	+	0	NA	Intergenic	Intergenic	-3858	NM_013723	27205	Mm.89918	NM_013723	ENSMUSG00000025608	Podxl	AW121214|Ly102|PC|PCLP-1|Pclp1	podocalyxin-like	protein-coding
common_peak1-9263-8-9--0.316705676939792-1.03275496310833	chr11	87074230	87074583	+	0	NA	intron (NM_177167, intron 1 of 6)	L1ME2z|LINE|L1	98090	NM_177167	320472	Mm.341988	NM_177167	ENSMUSG00000046442	Ppm1e	AW049266|B930008A12Rik|POPX1|PP2CH|mKIAA1072	protein phosphatase 1E (PP2C domain containing)	protein-coding
unique_peak2-39664-10-35--1.81350965643354-3.49519823291231	chr9	107554577	107555434	+	0	NA	intron (NM_001199217, intron 14 of 15)	(CATA)n|Simple_repeat|Simple_repeat	14725	NM_023805	76257	Mm.296560	NM_023805	ENSMUSG00000010064	Slc38a3	0610012J02Rik|D9Ucla2|Nat1|Slc38-3|Sn1|Snat3|mNAT	solute carrier family 38, member 3	protein-coding
common_peak2-28070-19-48--1.21202251745352-2.65769701904854	chr4	70409632	70411070	+	0	NA	Intergenic	L1MA6|LINE|L1	-214389	NM_172694	230316	Mm.251188	NM_172694		Megf9	4933405H16Rik|9630025C07|Egfl5|mKIAA0818	multiple EGF-like-domains 9	protein-coding
common_peak2-25143-24-14-0.886319307159198-1.33403699391683	chr18	44824719	44825296	+	0	NA	intron (NR_026853, intron 1 of 4)	MTD|LTR|MaLR	-3087	NM_001085374	328949	Mm.312511	NM_001033406	ENSMUSG00000071856	Mcc	D18Ertd451e|E330037C19	mutated in colorectal cancers	protein-coding
unique_peak1-6850-12-1-2.64877598508764-3.36932189928148	chr8	84771710	84772234	+	0	NA	Intergenic	Intergenic	154513	NM_001254747	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
unique_peak1-2641-13-2-2.19350952991661-3.03832868024006	chr16	45069855	45070420	+	0	NA	Intergenic	Intergenic	-24029	NM_026439	67896	Mm.181074	NM_026439	ENSMUSG00000022665	Ccdc80	2610001E17Rik|DRO1|Ssg1|Urb	coiled-coil domain containing 80	protein-coding
common_peak2-22222-13-13--0.0288828914198356-0.309074325783021	chr12	112952566	112953327	+	0	NA	intron (NM_001163388, intron 1 of 5)	intron (NM_001163388, intron 1 of 5)	1466	NM_026511	68020	Mm.425762	NM_026511	ENSMUSG00000037787	Apopt1	1700081D05Rik|2810002N01Rik|Apop-1|Apop1	apoptogenic, mitochondrial 1	protein-coding
common_peak2-21852-72-92-0.129425001764287-0.413011183519103	chr11	121696927	121698927	+	0	NA	intron (NM_029049, intron 3 of 3)	intron (NM_029049, intron 3 of 3)	6395	NM_029049	74675	Mm.61213	NM_029049	ENSMUSG00000039198	Ptchd3	4930451E13Rik|4933440L20Rik|RNDEu-3	patched domain containing 3	protein-coding
unique_peak1-3147-16-6-1.31090872021046-1.49151883326344	chr18	36670534	36671091	+	0	NA	intron (NM_010415, intron 3 of 5)	intron (NM_010415, intron 3 of 5)	4647	NM_010415	15200	Mm.289681	NM_010415	ENSMUSG00000024486	Hbegf	AW047313|Dtr|Dts|Hegfl	heparin-binding EGF-like growth factor	protein-coding
common_peak1-10804-34-16-1.29460568575093-2.92433603673115	chr14	78329993	78331287	+	0	NA	intron (NM_178825, intron 3 of 6)	intron (NM_178825, intron 3 of 6)	26594	NM_029495	108670	Mm.68134	NM_029495	ENSMUSG00000022014	Epsti1	2310046K10Rik|5033415K03Rik|BRESI1	epithelial stromal interaction 1 (breast)	protein-coding
common_peak2-31553-8-6-0.197867495889966-1.03789460276074	chr8	111940258	111940575	+	0	NA	Intergenic	Intergenic	-75608	NR_002928	384864	Mm.390083	NR_002928		Gm1943	-	WD repeat domain 70 pseudogene	pseudo
unique_peak1-7217-10-4-1.03448725012141-1.5150158574804	chr9	70227834	70228259	+	0	NA	intron (NM_181072, intron 25 of 27)	GA-rich|Low_complexity|Low_complexity	25514	NR_049200	100885839		NR_049200	miRBase:MI0019195	Mir5626	mmu-mir-5626	microRNA mir-5626	ncRNA
unique_peak1-4070-15-4-1.69023665566829-1.97518968347063	chr2	65194863	65195518	+	0	NA	intron (NM_177074, intron 4 of 11)	intron (NM_177074, intron 4 of 11)	6893	NM_177074	320106	Mm.227703	NM_177074	ENSMUSG00000061171	Slc38a11	9330158F14Rik	solute carrier family 38, member 11	protein-coding
common_peak2-24865-5-7--0.704380336005853-1.01466476204226	chr17	79598617	79598983	+	0	NA	Intergenic	Intergenic	147554	NM_027455	70536	Mm.293870	NM_027455	ENSMUSG00000024084	Qpct	5730422A13Rik	glutaminyl-peptide cyclotransferase (glutaminyl cyclase)	protein-coding
common_peak1-18709-22-13-0.8399291830298-1.1381569562463	chr8	122566468	122567463	+	0	NA	intron (NM_030209, intron 14 of 14)	intron (NM_030209, intron 14 of 14)	50595	NM_030209	78892	Mm.264680	NM_030209	ENSMUSG00000031825	Crispld2	1810049K24Rik|Lcrisp2|Lgl1|coffeecrisp	cysteine-rich secretory protein LCCL domain containing 2	protein-coding
unique_peak2-37149-2-4--1.23938235115068-0.931118710592187	chr4	35202534	35202962	+	0	NA	Intergenic	RMER17C|LTR|ERVK	-29619	NM_001081343	73205	Mm.331544	NM_001081343	ENSMUSG00000028300	3110043O21Rik	AI840585	RIKEN cDNA 3110043O21 gene	protein-coding
common_peak1-14096-11-7-0.508693584251613-1.21681515183528	chr2	124858808	124859304	+	0	NA	Intergenic	MER121|Unknown|Unknown	-34807	NM_175034	317750	Mm.330538	NM_175034	ENSMUSG00000035183	Slc24a5	F630045L20Rik|JSX|NCKX5|NCX5|Oca6	solute carrier family 24, member 5	protein-coding
common_peak2-31174-10-5-0.771452844287613-1.33892459842472	chr8	46445903	46446234	+	0	NA	intron (NM_153535, intron 1 of 13)	intron (NM_153535, intron 1 of 13)	21577	NM_153535	212326	Mm.51259	NM_153535	ENSMUSG00000070044	Fam149a	AW213256|mKIAA4166	family with sequence similarity 149, member A	protein-coding
common_peak1-7862-13-13--0.0288828914198356-0.309074325783021	chr1	133163791	133164516	+	0	NA	intron (NM_019777, intron 13 of 21)	Lx7|LINE|L1	11987	NM_019777	56489	Mm.386783	NM_019777	ENSMUSG00000042349	Ikbke	AW558201|IKK-i|IKKepsilon|Ikki	inhibitor of kappaB kinase epsilon	protein-coding
common_peak1-11342-18-14-0.406028555619833-0.532159081577619	chr15	87655336	87655944	+	0	NA	Intergenic	Intergenic	-29267	NR_105817	102465209		NR_105817	miRBase:MI0021927	Mir6393	mmu-mir-6393	microRNA mir-6393	ncRNA
common_peak1-9865-9-22--1.33394854965279-1.52222891542741	chr12	80790629	80791154	+	0	NA	intron (NM_009014, intron 8 of 10)	intron (NM_009014, intron 8 of 10)	392553	NM_001252562	19363	Mm.341756	NM_009014	ENSMUSG00000059060	Rad51b	AI553500|R51H2|Rad51l1|mREC2	RAD51 homolog B	protein-coding
unique_peak1-3073-16-2-2.53330114154691-3.78760380288747	chr18	15832845	15833338	+	0	NA	intron (NM_199055, intron 1 of 3)	intron (NM_199055, intron 1 of 3)	43464	NM_199055	71367	Mm.329304	NM_199055	ENSMUSG00000047161	Chst9	5430438D01Rik	carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9	protein-coding
common_peak1-15528-9-6-0.382258484346616-1.11707584880836	chr4	118235623	118236051	+	0	NA	intron (NM_026789, intron 20 of 21)	Lx6|LINE|L1	-19506	NM_172383	230678	Mm.23639	NM_172383	ENSMUSG00000050854	Tmem125	6330530A05Rik|AV223516	transmembrane protein 125	protein-coding
common_peak1-13189-13-3-1.77847203063777-2.58603100924543	chr19	19246677	19247239	+	0	NA	Intergenic	Intergenic	-61272	NM_001043354	225998	Mm.234641	NM_146095	ENSMUSG00000036192	Rorb	Nr1f2|RZR-beta|RZRB|Rorbeta	RAR-related orphan receptor beta	protein-coding
common_peak2-31114-37-46--0.0285957801918189-0.301029995663982	chr8	33652814	33654247	+	0	NA	Intergenic	Intergenic	391163	NR_046039	666589	Mm.367675	NR_046039		Gm8179	EG666589	predicted gene 8179	ncRNA
common_peak2-28621-23-33--0.365695336741259-0.481798116163913	chr5	24907971	24909034	+	0	NA	intron (NM_001081383, intron 6 of 58)	intron (NM_001081383, intron 6 of 58)	96099	NM_001081383	231051	Mm.332268	NM_001081383	ENSMUSG00000038056	Kmt2c	E330008K23Rik|HALR|Mll3|mKIAA1506	lysine (K)-specific methyltransferase 2C	protein-coding
common_peak1-17366-9-6-0.382258484346616-1.11707584880836	chr7	56049523	56050000	+	0	NA	intron (NM_028031, intron 1 of 16)	Lx7|LINE|L1	5388	NM_028031	243983	Mm.279116	NM_028031	ENSMUSG00000030471	Zdhhc13	2410004E01Rik|C530010M18|HIP3RP|Hip14l|kojak|skc4	zinc finger, DHHC domain containing 13	protein-coding
common_peak2-27125-15-22--0.511397205501357-0.50761186003982	chr3	19188243	19188953	+	0	NA	intron (NM_001122759, intron 1 of 12)	(TG)n|Simple_repeat|Simple_repeat	22724	NM_001122759	18583	Mm.355614	NM_008802	ENSMUSG00000069094	Pde7a	AU015378|AW047537	phosphodiesterase 7A	protein-coding
common_peak2-27502-18-32--0.731474968130102-0.907815120698057	chr3	95041914	95042848	+	0	NA	intron (NM_001024841, intron 1 of 1)	B3|SINE|B2	2650	NM_001024841	229588	Mm.387177	NM_001024841		Gm128	Ment|pmis1	predicted gene 128	protein-coding
common_peak1-12422-11-21--0.950738034385684-0.991115276827166	chr17	74797205	74797742	+	0	NA	intron (NM_144798, intron 1 of 13)	L1Md_F2|LINE|L1	2525	NM_144798	210148	Mm.243943	NM_144798	ENSMUSG00000024069	Slc30a6	9530029F08Rik|ZnT6	solute carrier family 30 (zinc transporter), member 6	protein-coding
common_peak2-28376-31-42--0.201026083888975-0.369793428364259	chr4	137993017	137994454	+	0	NA	intron (NM_026689, intron 2 of 3)	intron (NM_026689, intron 2 of 3)	3148	NM_026689	68350	Mm.103413	NM_026689	ENSMUSG00000041241	Mul1	0610009K11Rik|AV000801|Gide	mitochondrial ubiquitin ligase activator of NFKB 1	protein-coding
common_peak2-24955-33-26-0.576450060362061-0.950816664083185	chr18	84049871	84050678	+	0	NA	Intergenic	Lx8|LINE|L1	205680	NM_001081300	110796	Mm.102136	NM_001081300	ENSMUSG00000046982	Tshz1	5730407I04Rik|D18Bwg1409e|Mtsh1|NY-CO-33|Sdccag33|Tsh1|mKIAA4206|teashirt1	teashirt zinc finger family member 1	protein-coding
common_peak2-30004-15-16--0.075298090694683-0.301029995663976	chr6	124745584	124746297	+	0	NA	Intergenic	RMER12B|LTR|ERVK	-13019	NM_013539	14794	Mm.261906	NM_013539	ENSMUSG00000038451	Spsb2	AI461677|C9|Grcc9|SSB2	splA/ryanodine receptor domain and SOCS box containing 2	protein-coding
common_peak1-16477-28-19-0.7310310249341-1.12969433525548	chr5	137501594	137502490	+	0	NA	Intergenic	Intergenic	-4123	NM_001039385	381677	Mm.389697	NM_001039385	ENSMUSG00000037428	Vgf	Gm1052	VGF nerve growth factor inducible	protein-coding
common_peak2-25790-88-169--0.393978526967169-1.47044771712026	chr19	36347653	36349529	+	0	NA	Intergenic	HERV16-int|LTR|ERVL	-104966	NM_029508	76073	Mm.259180	NM_029508	ENSMUSG00000024805	Pcgf5	0610009F02Rik|1110054A01Rik|5830406C17Rik|5830443C21Rik|9530023M17Rik|AI324127	polycomb group ring finger 5	protein-coding
unique_peak2-34169-6-49--3.07845807939442-8.62624725869856	chr13	31806865	31808139	+	0	NA	Intergenic	Intergenic	89817	NM_010225	14238	Mm.125548	NM_010225	ENSMUSG00000038402	Foxf2	FREAC2|Fkh20|LUN	forkhead box F2	protein-coding
common_peak1-15278-14-16--0.188246680892695-0.308035960714963	chr4	40142336	40142950	+	0	NA	intron (NM_007386, intron 19 of 20)	intron (NM_007386, intron 19 of 20)	44215	NM_172689	230073	Mm.86382	NM_172689		Ddx58	6430573D20Rik|C330021E21|RIG-I|RLR-1	DEAD (Asp-Glu-Ala-Asp) box polypeptide 58	protein-coding
common_peak1-16094-22-15-0.647284105087405-0.849699271740893	chr5	64807622	64808639	+	0	NA	Intergenic	ORR1A2-int|LTR|MaLR	51051	NR_040681	69999	Mm.261413	NR_040681		1700027F09Rik	-	RIKEN cDNA 1700027F09 gene	ncRNA
common_peak2-27107-53-65-0.0965788930574751-0.358528808455797	chr3	9003879	9004940	+	0	NA	exon (NM_001025263, exon 1 of 7)	exon (NM_001025263, exon 1 of 7)	106	NM_009412	21985	Mm.371590	NM_009412	ENSMUSG00000027506	Tpd52	AI043038|mD52	tumor protein D52	protein-coding
unique_peak1-2504-9-3-1.18961340640422-1.57096726280955	chr16	13603186	13603746	+	0	NA	intron (NM_028761, intron 20 of 23)	B4A|SINE|B4	64797	NM_028761	74108	Mm.182350	NM_028761	ENSMUSG00000022685	Parn	1200003I18Rik|DAN	poly(A)-specific ribonuclease (deadenylation nuclease)	protein-coding
common_peak2-22315-25-54--0.919509808179554-1.96184293807029	chr13	21715699	21717171	+	0	NA	Intergenic	Lx7|LINE|L1	-12562	NM_146744	258739	Mm.377667	NM_146744	ENSMUSG00000051258	Olfr1362	MOR256-8|Olfr1363-ps1	olfactory receptor 1362	protein-coding
unique_peak1-4586-9-2-1.60465090568306-1.87199725847353	chr3	57389105	57389609	+	0	NA	Intergenic	Intergenic	-9525	NM_001168281	97064	Mm.405029	NM_133784	ENSMUSG00000027803	Wwtr1	2310058J06Rik|2610021I22Rik|C78399|Taz	WW domain containing transcription regulator 1	protein-coding
unique_peak2-33828-2-6--1.72480917832092-1.26211192963361	chr12	8779110	8779507	+	0	NA	intron (NM_011519, intron 1 of 4)	CpG	1106	NM_011519	20969	Mm.2580	NM_011519	ENSMUSG00000020592	Sdc1	AA408134|AA409076|CD138|Sstn|Synd|Synd1|syn-1	syndecan 1	protein-coding
common_peak2-27605-59-93--0.22922485080506-0.513356579122551	chr3	103279265	103280982	+	0	NA	Intergenic	Intergenic	-99082	NM_001276679	54524	Mm.88818	NM_018800	ENSMUSG00000027849	Syt6	3110037A08Rik|AW048930|sytVI	synaptotagmin VI	protein-coding
common_peak1-8098-87-119-0.0887465101726503-0.372255990168206	chr1	181210842	181212669	+	0	NA	intron (NM_027188, intron 5 of 11)	intron (NM_027188, intron 5 of 11)	236379	NM_027188	69726	Mm.222338	NM_027188		Smyd3	2410008A19Rik|Zmynd1	SET and MYND domain containing 3	protein-coding
common_peak1-15892-33-36-0.121884196896579-0.346766333527252	chr5	14025119	14026282	+	0	NA	5' UTR (NM_011348, exon 1 of 17)	5' UTR (NM_011348, exon 1 of 17)	424	NM_011348	20349	Mm.134093	NM_011348	ENSMUSG00000063531	Sema3e	6430702L12|AA408817|Semah|mKIAA0331	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E	protein-coding
unique_peak2-35717-11-9-0.186765489364251-0.344532117358383	chr18	33998253	33998764	+	0	NA	intron (NM_013512, intron 13 of 23)	Lx4A|LINE|L1	43962	NR_038151	69749	Mm.248787	NR_038151	ENSMUSG00000087590	2410004N09Rik	-	RIKEN cDNA 2410004N09 gene	ncRNA
common_peak1-15693-9-3-1.18961340640422-1.57096726280955	chr4	139255564	139256083	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	46370	NM_031873	83770	Mm.190612	NM_031873	ENSMUSG00000028738	Tas1r2	Gpr71|T1r2|TR2	taste receptor, type 1, member 2	protein-coding
common_peak1-8837-40-35-0.489050681308786-0.951203349073949	chr11	26593013	26594314	+	0	NA	Intergenic	Lx6|LINE|L1	-91445	NR_002890	654472	Mm.347777	NR_002890	ENSMUSG00000069939	Gm12070	OTTMUSG00000005300	glyceraldehyde-3-phosphate dehydrogenase pseudogene	pseudo
common_peak1-10107-24-42--0.633054851934381-0.913161965438649	chr13	28958034	28959323	+	0	NA	intron (NR_045053, intron 2 of 8)	intron (NR_045053, intron 2 of 8)	18613	NR_045054	72518	Mm.37454	NR_045053		2610307P16Rik	AI666457	RIKEN cDNA 2610307P16 gene	ncRNA
unique_peak2-38518-1-5--2.2120195109379-1.32905871926422	chr7	45538912	45539346	+	0	NA	Intergenic	Intergenic	980775	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak2-37591-7-10--0.660340788339108-1.12966497611638	chr5	43949268	43949760	+	0	NA	intron (NM_001135172, intron 1 of 2)	intron (NM_001135172, intron 1 of 2)	42706	NM_001135172	109323	Mm.275553	NM_175425	ENSMUSG00000061535	C1qtnf7	5530401N20Rik|8430425G24Rik|Ctrp7	C1q and tumor necrosis factor related protein 7	protein-coding
unique_peak2-38990-3-4--0.73591118484664-0.864171920961574	chr8	44379675	44380093	+	0	NA	TTS (NM_009556)	TTS (NM_009556)	12479	NM_009556	22702	Mm.285848	NM_009556	ENSMUSG00000051176	Zfp42	Rex-1|Rex1|Zfp-42	zinc finger protein 42	protein-coding
common_peak1-12652-116-161-0.154279330624797-0.531032240362716	chr18	36280144	36281708	+	0	NA	intron (NM_001167891, intron 1 of 9)	intron (NM_001167891, intron 1 of 9)	15069	NR_015571	74966	Mm.379238	NM_030089		4930471G03Rik	1700007N01Rik	RIKEN cDNA 4930471G03 gene	ncRNA
unique_peak2-39465-2-6--1.72480917832092-1.26211192963361	chr9	54802887	54803183	+	0	NA	intron (NM_011966, intron 6 of 8)	B1_Mur4|SINE|Alu	-4274	NM_145229	246735	Mm.473773	NM_145229	ENSMUSG00000044820	AY074887	Mcpr1	cDNA sequence AY074887	protein-coding
common_peak2-24383-21-14-0.662598669657717-0.879255460030357	chr17	12297831	12298457	+	0	NA	Intergenic	MTC|LTR|MaLR	-14006	NM_026644	68262	Mm.258300	NM_026644	ENSMUSG00000023827	Agpat4	1500003P24Rik	1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)	protein-coding
common_peak2-23682-25-25-0.161410187204014-0.36542888694933	chr15	85879083	85879964	+	0	NA	Intergenic	Intergenic	-8602	NM_172611	223752	Mm.24442	NM_172611	ENSMUSG00000035900	Gramd4	9930016O13	GRAM domain containing 4	protein-coding
unique_peak2-34051-4-6--0.830815435910851-0.989110657569874	chr12	116262725	116263105	+	0	NA	Intergenic	Intergenic	-511010	NR_106063	102465664		NR_106063	miRBase:MI0022945	Mir7094-2	mmu-mir-7094-2	microRNA mir-7094-2	ncRNA
common_peak2-30749-2-6--1.72480917832092-1.26211192963361	chr7	119720940	119721248	+	0	NA	intron (NM_020606, intron 10 of 12)	Lx8|LINE|L1	-101740	NM_001166584	21676	Mm.24685	NM_009346	ENSMUSG00000055320	Tead1	2610024B07Rik|B230114H05Rik|Gtrgeo5|TEAD-1|TEF-1|Tcf13|mTEF-1	TEA domain family member 1	protein-coding
unique_peak1-94-10-3-1.35641534500877-1.75805390616669	chr1	46887825	46888347	+	0	NA	intron (NM_172653, intron 3 of 9)	intron (NM_172653, intron 3 of 9)	22268	NM_172653	227059	Mm.233889	NM_172653	ENSMUSG00000025986	Slc39a10	2900042E17Rik|5430433I10|mKIAA1265	solute carrier family 39 (zinc transporter), member 10	protein-coding
common_peak1-14488-43-37-0.534635672080118-1.07072119362139	chr3	8923016	8924221	+	0	NA	exon (NM_025434, exon 1 of 3)	exon (NM_025434, exon 1 of 3)	239	NM_025434	66230	Mm.38460	NM_025434	ENSMUSG00000040269	Mrps28	1500012D08Rik|AW061224	mitochondrial ribosomal protein S28	protein-coding
common_peak2-19553-26-29-0.0210084965499435-0.304710633611964	chr1	193413066	193413927	+	0	NA	intron (NM_178632, intron 4 of 19)	intron (NM_178632, intron 4 of 19)	13883	NM_178632	77065	Mm.338175	NM_178632	ENSMUSG00000037461	Ints7	5930412E23Rik	integrator complex subunit 7	protein-coding
unique_peak1-2586-13-1-2.77847203063777-3.64038867156802	chr16	31004013	31004658	+	0	NA	intron (NM_198626, intron 3 of 3)	intron (NM_198626, intron 3 of 3)	77183	NM_198626	268880	Mm.286693	NM_198626	ENSMUSG00000047434	Xxylt1	AI480653	xyloside xylosyltransferase 1	protein-coding
common_peak2-27640-67-116--0.32595323680041-0.851766258064314	chr3	107695279	107696902	+	0	NA	TTS (NM_133867)	TTS (NM_133867)	-2682	NM_010360	14866	Mm.282351	NM_010360	ENSMUSG00000004032	Gstm5	-	glutathione S-transferase, mu 5	protein-coding
common_peak1-13541-21-33--0.517973575984104-0.610902792227722	chr2	3331703	3332901	+	0	NA	intron (NM_008579, intron 1 of 2)	intron (NM_008579, intron 1 of 2)	7618	NM_008579	104362	Mm.2688	NM_008579	ENSMUSG00000026650	Meig1	MLZ-278|Meg1	meiosis expressed gene 1	protein-coding
unique_peak1-3742-10-0-3.35641534500877-3.31132995230379	chr19	47320140	47320622	+	0	NA	intron (NM_021360, intron 3 of 5)	intron (NM_021360, intron 3 of 5)	17048	NM_001163480	18011	Mm.313651	NM_021360	ENSMUSG00000006435	Neurl1a	2410129E16Rik|AI450910|AI481072|Neu1|Neur1|Neurl|Neurl1|Nlz|Rnf67	neuralized homolog 1A (Drosophila)	protein-coding
common_peak2-20800-12-20--0.743541437691122-0.625923329873571	chr10	123196230	123196990	+	0	NA	Intergenic	Intergenic	495478	NM_001252387	268354	Mm.51939	NM_182807	ENSMUSG00000044071	Fam19a2	6330575M02|FAM19A2 TAFA-2|TAFA2|Tafa-2	family with sequence similarity 19, member A2	protein-coding
unique_peak1-4195-10-0-3.35641534500877-3.31132995230379	chr2	117840466	117841043	+	0	NA	Intergenic	Intergenic	-96904	NM_011580	21825	Mm.4159	NM_011580	ENSMUSG00000040152	Thbs1	TSP-1|TSP1|Thbs-1|tbsp1	thrombospondin 1	protein-coding
common_peak1-18808-10-9-0.0344872501214071-1.05503135781948	chr9	77544903	77545491	+	0	NA	Intergenic	L1Md_A|LINE|L1	-57145	NM_010295	14629	Mm.89888	NM_010295	ENSMUSG00000032350	Gclc	D9Wsu168e|GLCL-H|Ggcs-hs|Glclc	glutamate-cysteine ligase, catalytic subunit	protein-coding
common_peak2-22187-15-14-0.105274154947137-0.330004445983672	chr12	106045927	106046596	+	0	NA	intron (NM_053155, intron 1 of 13)	intron (NM_053155, intron 1 of 13)	-56099	NM_148948	192119	Mm.21135	NM_148948	ENSMUSG00000041415	Dicer1	1110006F08Rik|D12Ertd7e|mKIAA0928	dicer 1, ribonuclease type III	protein-coding
unique_peak2-35620-8-15--0.994777582052429-0.771068449301683	chr17	86961942	86962476	+	0	NA	intron (NM_011104, intron 11 of 14)	L2|LINE|L2	-190995	NM_010137	13819	Mm.1415	NM_010137	ENSMUSG00000024140	Epas1	HIF-2alpha|HIF2A|HLF|HRF|MOP2|bHLHe73	endothelial PAS domain protein 1	protein-coding
common_peak2-29724-44-44-0.33003973823886-0.665385344403438	chr6	84270250	84272026	+	0	NA	Intergenic	Intergenic	102694	NR_046063	100038556	Mm.387783	NR_046063		Gm10445	ENSMUSG00000072956	predicted gene 10445	ncRNA
common_peak2-25706-26-13-1.12054417010086-1.80107744087171	chr19	20530315	20530968	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-36564	NR_015502	320092	Mm.482524	NR_015502		E030003E18Rik	1700127G21Rik	RIKEN cDNA E030003E18 gene	ncRNA
common_peak2-32108-12-5-1.06381348436648-1.78669045979184	chr9	99725248	99725601	+	0	NA	Intergenic	Intergenic	51165	NM_011440	20669	Mm.261595	NM_011440	ENSMUSG00000053747	Sox14	-	SRY (sex determining region Y)-box 14	protein-coding
unique_peak2-33533-9-8-0.0196884049619079-1.03275496310833	chr11	77489535	77490064	+	0	NA	Intergenic	B2_Mm1a|SINE|B2	-9842	NM_001024205	68564	Mm.428996	NM_001024205		Nufip2	1110001M19Rik|9530056D24Rik|AI256692|AI461731|PIG1|mKIAA1321	nuclear fragile X mental retardation protein interacting protein 2	protein-coding
common_peak2-30913-36-59--0.427569509440764-0.711514064421841	chr7	144469433	144470737	+	0	NA	intron (NM_010096, intron 6 of 15)	intron (NM_010096, intron 6 of 15)	36043	NM_001113415	13593	Mm.258708	NM_010096	ENSMUSG00000010476	Ebf3	3110018A08Rik|O/E-2|mKIAA4201	early B cell factor 3	protein-coding
unique_peak1-1798-9-2-1.60465090568306-1.87199725847353	chr14	25225964	25226466	+	0	NA	Intergenic	ETnERV2-int|LTR|ERVK	80053	NM_001081247	218832	Mm.343610	NM_183157	ENSMUSG00000025280	Polr3a	9330175N20Rik|BC053071|RPC1|RPC155	polymerase (RNA) III (DNA directed) polypeptide A	protein-coding
common_peak2-27661-6-5--0.0195643903408542-0.947717972411649	chr3	108721033	108721396	+	0	NA	Intergenic	RMER21B|LTR|ERV1	-6592	NM_025845	66921	Mm.51049	NM_025845	ENSMUSG00000027881	Prpf38b	1110021E09Rik|AU018955	PRP38 pre-mRNA processing factor 38 (yeast) domain containing B	protein-coding
common_peak2-19993-14-6-1.09186123830004-1.16633110333236	chr1	134095685	134096015	+	0	NA	intron (NM_001033250, intron 1 of 3)	intron (NM_001033250, intron 1 of 3)	1185	NR_029777	723818		NR_029777	miRBase:MI0000646	Mir135b	Mirn135b	microRNA 135b	ncRNA
unique_peak1-2682-8-2-1.42025991722641-1.65811743852845	chr16	64836182	64836702	+	0	NA	Intergenic	(TTTG)n|Simple_repeat|Simple_repeat	-15469	NM_178647	106143	Mm.10160	NM_178647	ENSMUSG00000054604	Cggbp1	AA960172|AL023996|AW045841	CGG triplet repeat binding protein 1	protein-coding
common_peak2-29719-30-25-0.469235691350781-0.734130039933318	chr6	84225509	84226631	+	0	NA	Intergenic	Intergenic	147762	NR_046063	100038556	Mm.387783	NR_046063		Gm10445	ENSMUSG00000072956	predicted gene 10445	ncRNA
common_peak2-28771-15-16--0.075298090694683-0.301029995663976	chr5	52669321	52669761	+	0	NA	Intergenic	Intergenic	-61869	NR_040717	414111	Mm.417638	NR_040717		C130083M11Rik	-	RIKEN cDNA C130083M11 gene	ncRNA
common_peak2-22149-16-15-0.118263642268062-0.328191099940264	chr12	86800380	86800956	+	0	NA	Intergenic	RMER15|LTR|ERVL	-14183	NM_010234	14281	Mm.246513	NM_010234	ENSMUSG00000021250	Fos	D12Rfj1|c-fos|cFos	FBJ osteosarcoma oncogene	protein-coding
common_peak2-25878-25-26-0.106962403181638-0.336580821310522	chr19	44135371	44135950	+	0	NA	intron (NM_001164359, intron 5 of 11)	intron (NM_001164359, intron 5 of 11)	8516	NM_145502	226144	Mm.279865	NM_145502	ENSMUSG00000025198	Erlin1	2810439N09Rik|C80197|Keo4|Spfh1	ER lipid raft associated 1	protein-coding
common_peak1-15127-12-21--0.810655633549659-0.713635438203849	chr3	138746228	138746894	+	0	NA	Intergenic	Intergenic	-8396	NM_001040690	229877	Mm.28893	NM_145544	ENSMUSG00000028149	Rap1gds1	BC011279|GDS1	RAP1, GTP-GDP dissociation stimulator 1	protein-coding
unique_peak1-2979-21-1-3.56948926526624-6.00334947154112	chr17	77612942	77613739	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-986248	NM_015800	50766	Mm.311912	NM_015800	ENSMUSG00000024074	Crim1	AU015004	cysteine rich transmembrane BMP regulator 1 (chordin like)	protein-coding
common_peak2-27004-26-25-0.22745937401737-0.399869693390336	chr2	172370826	172371609	+	0	NA	Intergenic	Intergenic	-3876	NM_009335	21420	Mm.3629	NM_009335	ENSMUSG00000028640	Tfap2c	AA409384|AP2gamma|Ap-2.2|Stra2|Tcfap2c	transcription factor AP-2, gamma	protein-coding
common_peak2-22245-34-49--0.261787662773458-0.418071017975767	chr13	63814690	63815783	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-101392	NM_001013608	76251	Mm.186610	NM_023507	ENSMUSG00000021470	Ercc6l2	0610007P08Rik|1700019D06Rik|9330134C04Rik|Rad26l|Sr278	excision repair cross-complementing rodent repair deficiency, complementation group 6 like 2	protein-coding
common_peak2-31576-11-9-0.186765489364251-0.344532117358383	chr8	119604614	119605105	+	0	NA	intron (NM_029686, intron 2 of 42)	intron (NM_029686, intron 2 of 42)	1490	NM_029686	76645	Mm.159753	NM_029686	ENSMUSG00000034416	Pkd1l2	1700126L06Rik	polycystic kidney disease 1 like 2	protein-coding
common_peak1-7631-105-119-0.414443314914648-1.61411170324017	chr1	64532011	64533881	+	0	NA	Intergenic	RMER16|LTR|ERVK	-46432	NM_133828	12912	Mm.422634	NM_009952	ENSMUSG00000025958	Creb1	2310001E10Rik|3526402H21Rik|AV083133|Creb|Creb-1	cAMP responsive element binding protein 1	protein-coding
unique_peak1-837-11-8-0.338768582809301-1.14218153353838	chr11	8703765	8704293	+	0	NA	Intergenic	Intergenic	-139491	NM_001083587	319939	Mm.337820	NM_001083587	ENSMUSG00000020422	Tns3	BC023928|F830010I22Rik|TEM6|Tens1	tensin 3	protein-coding
common_peak2-25742-49-67--0.0811790182251553-0.315949812664558	chr19	26747115	26748844	+	0	NA	intron (NM_011416, intron 14 of 32)	AT_rich|Low_complexity|Low_complexity	68329	NM_011416	67155	Mm.491146	NM_011416	ENSMUSG00000024921	Smarca2	2610209L14Rik|SNF2alpha|Snf2l2|brahma|brm	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	protein-coding
unique_peak2-33523-8-12--0.695217300193522-0.475924844171029	chr11	76202000	76202554	+	0	NA	intron (NM_008750, intron 1 of 7)	intron (NM_008750, intron 1 of 7)	10366	NM_008750	18230	Mm.27915	NM_008750	ENSMUSG00000020844	Nxn	l11Jus13	nucleoredoxin	protein-coding
common_peak2-24770-18-33--0.774543690021988-1.00055860626307	chr17	56584039	56584586	+	0	NA	intron (NM_001252456, intron 6 of 28)	intron (NM_001252456, intron 6 of 28)	17332	NM_001252456	19280	Mm.258771	NM_011218	ENSMUSG00000013236	Ptprs	AL022616|PTP|PTP-NU3|PTPNU-3|PTPsigma|Ptpt9|R-PTP-S|RPTPsigma	protein tyrosine phosphatase, receptor type, S	protein-coding
common_peak1-10744-32-76--0.987694521475241-2.93258054373007	chr14	67716062	67717201	+	0	NA	Intergenic	Intergenic	-25323	NM_001205188	71978	Mm.273997	NM_028032	ENSMUSG00000022052	Ppp2r2a	2410004D02Rik|mKIAA1541	protein phosphatase 2, regulatory subunit B, alpha	protein-coding
unique_peak2-32876-3-9--1.73591118484664-1.57096726280955	chr10	9504221	9504652	+	0	NA	intron (NM_001081344, intron 19 of 25)	intron (NM_001081344, intron 19 of 25)	99916	NR_038036	620417	Mm.378085	NR_038036		Gm6150	-	predicted gene 6150	ncRNA
unique_peak2-35347-5-14--1.61127093161437-1.95509489018123	chr17	24960243	24960715	+	0	NA	exon (NM_029197, exon 6 of 14)	exon (NM_029197, exon 6 of 14)	19152	NM_029197	75178	Mm.52592	NM_029197	ENSMUSG00000024155	Meiob	4930528F23Rik|MLZ-675	meiosis specific with OB domains	protein-coding
common_peak2-20327-10-21--1.10301627362853-1.16735254179725	chr10	117063296	117063903	+	0	NA	Intergenic	Lx5|LINE|L1	-2957	NM_027468	70574	Mm.339332	NM_027468	ENSMUSG00000020183	Cpm	1110060I01Rik|5730456K23Rik|AA589379|E030045M14Rik	carboxypeptidase M	protein-coding
common_peak1-15654-9-9--0.132314688483142-1.03275496310833	chr4	135678307	135678830	+	0	NA	Intergenic	(CACCAT)n|Simple_repeat|Simple_repeat	-21169	NM_008321	15903	Mm.110	NM_008321		Id3	Hlh462|Idb3|bHLHb25	inhibitor of DNA binding 3	protein-coding
unique_peak2-34145-3-15--2.41398308995928-2.80787975886178	chr13	23752379	23752814	+	0	NA	Intergenic	MER99|DNA|hAT?	23232	NM_178189	319164	Mm.261973	NM_178189	ENSMUSG00000069270	Hist1h2ac	-	histone cluster 1, H2ac	protein-coding
common_peak1-15701-26-28-0.0699180970308904-0.316008636696532	chr4	139597631	139598798	+	0	NA	intron (NM_198610, intron 4 of 9)	intron (NM_198610, intron 4 of 9)	-74273	NM_173427	242721	Mm.60400	NM_173427	ENSMUSG00000078234	Klhdc7a	B230308G19Rik	kelch domain containing 7A	protein-coding
unique_peak2-38988-6-7--0.434601889619698-0.97990265578305	chr8	42184042	42184440	+	0	NA	intron (NM_001005863, intron 1 of 13)	intron (NM_001005863, intron 1 of 13)	15780	NM_001286413	102103	Mm.149438	NM_001005863	ENSMUSG00000045636	Mtus1	AI481402|ATBP135|Atip1|B430010I23Rik|B430305I03Rik|C85752|Cctsg1-440|MD44|MTSG1|mKIAA1288	mitochondrial tumor suppressor 1	protein-coding
unique_peak2-32903-10-19--0.965512749878593-0.917676348953458	chr10	19167444	19168265	+	0	NA	Intergenic	Intergenic	91509	NM_053008	94222	Mm.156946	NM_053008	ENSMUSG00000045591	Olig3	Bhlhb7|bHLHe20	oligodendrocyte transcription factor 3	protein-coding
common_peak2-25668-5-7--0.704380336005853-1.01466476204226	chr19	10688239	10688638	+	0	NA	intron (NM_015735, intron 7 of 26)	intron (NM_015735, intron 7 of 26)	8323	NM_015735	13194	Mm.289915	NM_015735	ENSMUSG00000024740	Ddb1	127kDa|AA408517|p127-Ddb1	damage specific DNA binding protein 1	protein-coding
common_peak2-22134-6-7--0.434601889619698-0.97990265578305	chr12	85472697	85473130	+	0	NA	intron (NM_028821, intron 5 of 7)	B4A|SINE|B4	16526	NM_027438	70481	Mm.444348	NM_027438	ENSMUSG00000054383	Pnma1	5730402C15Rik	paraneoplastic antigen MA1	protein-coding
unique_peak1-2471-19-2-2.81772482594053-4.27364484827118	chr16	55819358	55820382	+	0	NA	intron (NM_001159395, intron 2 of 12)	intron (NM_001159395, intron 2 of 12)	2381	NM_001159394	80859	Mm.247272	NM_030612	ENSMUSG00000035356	Nfkbiz	AA408868|INAP|Mail	nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta	protein-coding
unique_peak1-924-7-0-2.79909083029819-2.40823996531185	chr11	51600767	51601105	+	0	NA	intron (NM_025535, intron 4 of 6)	B2_Mm1a|SINE|B2	23771	NM_025535	66397	Mm.196592	NM_025535	ENSMUSG00000020386	Sar1b	2310075M17Rik|2900019I22Rik|CMRD|Sara1b|Sara2|Sarb	SAR1 gene homolog B (S. cerevisiae)	protein-coding
unique_peak1-4998-16-3-2.11826364226806-2.65002542325363	chr4	117549469	117550192	+	0	NA	intron (NR_045570, intron 6 of 8)	intron (NR_045570, intron 6 of 8)	-4755	NM_001034876	381546	Mm.440118	NM_001034876	ENSMUSG00000078588	Ccdc24	Gm1028	coiled-coil domain containing 24	protein-coding
common_peak2-25854-45-26-1.1054705231814-3.01622027613199	chr19	42518760	42519491	+	0	NA	Intergenic	Intergenic	-12852	NM_145123	72832	Mm.313558	NM_145123	ENSMUSG00000042401	Crtac1	2810454P21Rik|AW047536|Crtac1B|Lotus	cartilage acidic protein 1	protein-coding
unique_peak1-3550-10-0-3.35641534500877-3.31132995230379	chr19	24412808	24413268	+	0	NA	intron (NM_008846, intron 13 of 14)	intron (NM_008846, intron 13 of 14)	-57962	NM_008044	14297	Mm.7319	NM_008044	ENSMUSG00000059363	Fxn	FA|FARR|Frda|X25	frataxin	protein-coding
common_peak1-17529-35-63--0.568629741537496-1.12538602347822	chr7	28435615	28436653	+	0	NA	Intergenic	Intergenic	-2809	NM_028417	73032	Mm.44095	NM_028417	ENSMUSG00000007944	Ttc9b	2900074C18Rik	tetratricopeptide repeat domain 9B	protein-coding
unique_peak2-39512-7-8--0.370834171144123-1.00793137938329	chr9	63775029	63775525	+	0	NA	Intergenic	Intergenic	94589	NM_008542	17130	Mm.325757	NM_008542	ENSMUSG00000036867	Smad6	Madh6|b2b390Clo	SMAD family member 6	protein-coding
common_peak2-24839-25-37--0.386077608098479-0.512115693271959	chr17	74338601	74339634	+	0	NA	Intergenic	Intergenic	-39581	NM_011723	22436	Mm.11223	NM_011723	ENSMUSG00000024066	Xdh	XO|Xor|Xox-1|Xox1	xanthine dehydrogenase	protein-coding
common_peak2-19691-4-8--1.19338551529556-1.21878474469819	chr1	59579195	59579728	+	0	NA	intron (NM_001013771, intron 1 of 19)	RMER10B|LTR|ERVL	6353	NM_001013771	381260	Mm.486706	NM_001013771	ENSMUSG00000047361	Gm973	AW554518	predicted gene 973	protein-coding
common_peak2-28077-22-40--0.710267899530679-1.05951140195658	chr4	81442130	81443208	+	0	NA	Intergenic	Lx7|LINE|L1	-268615	NR_040659	545641	Mm.216028	NR_040659	ENSMUSG00000085022	Gm5860	EG545641	predicted gene 5860	ncRNA
common_peak2-25372-27-25-0.291106232754144-0.488172498216822	chr18	82855692	82856889	+	0	NA	intron (NM_177832, intron 1 of 29)	T-rich|Low_complexity|Low_complexity	5836	NM_177832	329002	Mm.34438	NM_177832	ENSMUSG00000041258	Zfp236	AI447957|Gm335	zinc finger protein 236	protein-coding
unique_peak2-34065-7-11--0.785871670422967-1.21681515183528	chr13	98532953	98533523	+	0	NA	Intergenic	Intergenic	203283	NR_046157	328314	Mm.138047	NR_046157		Gm5086	B230311A21|EG328314	predicted gene 5086	ncRNA
common_peak2-28899-15-35--1.15776025088666-1.87578206828671	chr5	91074221	91075066	+	0	NA	Intergenic	Intergenic	-5130	NM_028478	73246	Mm.30172	NM_028478	ENSMUSG00000029370	Rassf6	1600016B17Rik	Ras association (RalGDS/AF-6) domain family member 6	protein-coding
common_peak1-10806-58-77-0.0105477160282481-0.306598026174992	chr14	79066257	79067827	+	0	NA	intron (NM_001081336, intron 1 of 28)	intron (NM_001081336, intron 1 of 28)	-22784	NR_104044	380921	Mm.89591	NM_001081336	ENSMUSG00000034731	Dgkh	5930402B05Rik|D130015C16	diacylglycerol kinase, eta	protein-coding
unique_peak2-33836-1-5--2.2120195109379-1.32905871926422	chr12	10404196	10404554	+	0	NA	Intergenic	Intergenic	6789	NM_023697	105014	Mm.119343	NM_023697	ENSMUSG00000020621	Rdh14	3110030G19Rik|AW215439|PAN2	retinol dehydrogenase 14 (all-trans and 9-cis)	protein-coding
common_peak2-20422-5-4--0.0263084308932156-0.909929411522249	chr10	26373543	26373937	+	0	NA	Intergenic	Lx5|LINE|L1	20717	NR_033633	667572	Mm.482728	NR_033633	ENSMUSG00000098179	Gm8709	EG667572	glyceraldehyde-3-phosphate dehydrogenase pseudogene	pseudo
common_peak1-9300-16-21--0.341167976369236-0.392630012299441	chr11	90638190	90638918	+	0	NA	Intergenic	Intergenic	-27451	NR_045956	73922	Mm.233289	NR_045956	ENSMUSG00000085940	4930405D11Rik	-	RIKEN cDNA 4930405D11 gene	ncRNA
common_peak1-11291-11-12--0.191746133889479-0.310474156842889	chr15	83410423	83410940	+	0	NA	intron (NM_183017, intron 10 of 13)	intron (NM_183017, intron 10 of 13)	14906	NM_183017	223723	Mm.46778	NM_183017	ENSMUSG00000016757	Ttll12	BC055368|D430005B17	tubulin tyrosine ligase-like family, member 12	protein-coding
common_peak2-29263-11-11--0.0762689164695427-0.301029995663976	chr5	140705020	140705658	+	0	NA	intron (NM_010752, intron 10 of 17)	(TG)n|Simple_repeat|Simple_repeat	92167	NM_010752	17120	Mm.27250	NM_010752	ENSMUSG00000029554	Mad1l1	AI173502|AW550425|Mad1	MAD1 mitotic arrest deficient 1-like 1	protein-coding
common_peak2-22603-18-20--0.0793982715504091-0.301029995663976	chr13	74208511	74209210	+	0	NA	Intergenic	Intergenic	-9127	NM_028959	74470	Mm.73234	NM_028959	ENSMUSG00000021572	Cep72	2610029E11Rik|4933440J22Rik	centrosomal protein 72	protein-coding
common_peak2-20485-18-24--0.330937038546373-0.380101753845076	chr10	52233624	52234675	+	0	NA	Intergenic	MTE2b|LTR|MaLR	31396	NR_037920	22639	Mm.490597	NM_009540	ENSMUSG00000049576	Zfa-ps	Zfa|Zfx	zinc finger protein, autosomal, pseudogene	pseudo
common_peak1-8062-21-15-0.569489265266236-0.756118839439552	chr1	173941780	173942601	+	0	NA	intron (NM_033509, intron 3 of 7)	intron (NM_033509, intron 3 of 7)	15209	NM_033509	93840	Mm.36148	NM_033509	ENSMUSG00000026556	Vangl2	C530001F03Rik|Lp|Lpp1|Ltap|Vang1l2|loop-tail|ska17|ska<m17Jus>|stbm|strabismus	vang-like 2 (van gogh, Drosophila)	protein-coding
common_peak1-14199-109-100-0.727948199135406-3.9911827352518	chr2	148043003	148045579	+	0	NA	Intergenic	Intergenic	-171586	NM_010446	15376	Mm.938	NM_010446	ENSMUSG00000037025	Foxa2	HNF3-beta|HNF3beta|Hnf-3b|Hnf3b|Tcf-3b|Tcf3b	forkhead box A2	protein-coding
unique_peak2-39913-9-9--0.132314688483142-1.03275496310833	chrX	100494300	100494781	+	0	NA	Intergenic	Intergenic	-22197	NM_007674	12592	Mm.4353	NM_007674	ENSMUSG00000031326	Cdx4	Cdx-3|Cdx-4|Cdx3	caudal type homeobox 4	protein-coding
unique_peak2-38329-6-4-0.24347001549294-0.989110657569874	chr6	147980484	147980899	+	0	NA	Intergenic	L1MCa|LINE|L1	-15247	NM_178797	330450	Mm.475174	NM_178797	ENSMUSG00000030303	Far2	A230046P18|AW048109|BC055759|Mlstd1	fatty acyl CoA reductase 2	protein-coding
unique_peak2-35966-6-7--0.434601889619698-0.97990265578305	chr19	17356143	17356563	+	0	NA	Intergenic	Lx5|LINE|L1	57642	NM_001136484	14537	Mm.244825	NM_010265	ENSMUSG00000038843	Gcnt1	5630400D21Rik|B130048E03|C2 GlcNAcT|C2GNT|IGnT	glucosaminyl (N-acetyl) transferase 1, core 2	protein-coding
common_peak2-21524-21-20-0.177171842487475-0.380101753845079	chr11	94653540	94654291	+	0	NA	intron (NM_001163172, intron 2 of 4)	intron (NM_001163172, intron 2 of 4)	-9898	NM_001034896	544806	Mm.379774	NM_001034896	ENSMUSG00000075610	Tmem92	AU016430|Tmem92-ps	transmembrane protein 92	protein-coding
unique_peak2-38187-5-14--1.61127093161437-1.95509489018123	chr6	97223089	97223796	+	0	NA	Intergenic	RMER19B|LTR|ERVK	-20668	NM_001081157	320502	Mm.68163	NM_001081157	ENSMUSG00000044086	Lmod3	5430424A14Rik	leiomodin 3 (fetal)	protein-coding
unique_peak2-37565-4-8--1.19338551529556-1.21878474469819	chr5	32863729	32864261	+	0	NA	Intergenic	L1_Rod|LINE|L1	-49549	NM_001205133	22612	Mm.4558	NM_009535	ENSMUSG00000014932	Yes1	Yes|p61-Yes	Yamaguchi sarcoma viral (v-yes) oncogene homolog 1	protein-coding
unique_peak1-5220-11-3-1.50869358425161-1.95434855131066	chr5	36726237	36726865	+	0	NA	intron (NM_030889, intron 1 of 26)	intron (NM_030889, intron 1 of 26)	14237	NM_030889	81840	Mm.34113	NM_030889	ENSMUSG00000029093	Sorcs2	N28137|mKIAA1329	sortilin-related VPS10 domain containing receptor 2	protein-coding
common_peak2-23990-28-18-0.805031606377877-1.27334590136207	chr16	18426032	18426798	+	0	NA	promoter-TSS (NM_013711)	promoter-TSS (NM_013711)	-95	NM_013711	26462	Mm.390906	NM_013711	ENSMUSG00000075704	Txnrd2	AA118373|ESTM573010|TGR|Tr3|Trxr2|Trxrd2	thioredoxin reductase 2	protein-coding
common_peak1-19401-32-108--1.48909230555727-7.61807641691138	chrX	68678550	68679631	+	0	NA	intron (NM_138309, intron 7 of 8)	intron (NM_138309, intron 7 of 8)	61155	NM_016985	53332	Mm.219672	NM_016985	ENSMUSG00000015214	Mtmr1	AW049210	myotubularin related protein 1	protein-coding
unique_peak2-39336-6-16--1.52206473087004-1.32521814697968	chr9	66060151	66060684	+	0	NA	intron (NM_010019, intron 2 of 11)	intron (NM_010019, intron 2 of 11)	54384	NM_010019	13143	Mm.304472	NM_010019	ENSMUSG00000032380	Dapk2	-	death-associated protein kinase 2	protein-coding
common_peak2-24961-13-17--0.391452970804544-0.364171515310935	chr18	4921622	4922304	+	0	NA	Intergenic	CpG	109479	NR_045881	100038439	Mm.387569	NR_045881	ENSMUSG00000097043	Gm10556	ENSMUSG00000073646	predicted gene 10556	ncRNA
common_peak1-11695-11-5-0.923731083530457-1.477227296591	chr16	31172090	31172614	+	0	NA	intron (NM_030138, intron 1 of 22)	intron (NM_030138, intron 1 of 22)	28972	NM_030138	78618	Mm.274646	NM_030138	ENSMUSG00000049076	Acap2	4832442G16|9530039J15Rik|CNT-B2|Centb2|mKIAA0041	ArfGAP with coiled-coil, ankyrin repeat and PH domains 2	protein-coding
common_peak2-22643-37-70--0.623754048018863-1.38710580071366	chr13	92530048	92531679	+	0	NA	intron (NM_009027, intron 9 of 23)	intron (NM_009027, intron 9 of 23)	370586	NM_009027	19418	Mm.248630	NM_009027		Rasgrf2	6330417G04Rik|AW048350|Grf2|Ras-GRF2	RAS protein-specific guanine nucleotide-releasing factor 2	protein-coding
unique_peak2-34885-6-7--0.434601889619698-0.97990265578305	chr15	79950802	79951136	+	0	NA	Intergenic	B3|SINE|B2	-12615	NM_025609	66513	Mm.288245	NM_025609	ENSMUSG00000022414	Tab1	2310012M03Rik|Map3k7ip1|b2b449Clo	TGF-beta activated kinase 1/MAP3K7 binding protein 1	protein-coding
unique_peak1-6858-11-2-1.92373108353046-2.32232533660526	chr8	86500020	86500687	+	0	NA	promoter-TSS (NM_001277898)	promoter-TSS (NM_001277898)	-429	NM_001277898	18747	Mm.19111	NM_008854	ENSMUSG00000005469	Prkaca	PKCD|Pkaca	protein kinase, cAMP dependent, catalytic, alpha	protein-coding
common_peak1-17725-14-13-0.0918612383000403-0.332077462497413	chr7	80114407	80115104	+	0	NA	Intergenic	Intergenic	132199	NR_046024	625243	Mm.261798	NR_046024		Gm6567	-	predicted gene 6567	ncRNA
common_peak2-28270-15-17--0.157760250886656-0.307611222530528	chr4	127353790	127354513	+	0	NA	Intergenic	B4A|SINE|B4	293934	NM_001134733	635169	Mm.346755	NM_001134733	ENSMUSG00000028813	CK137956	-	cDNA sequence CK137956	protein-coding
common_peak2-21938-20-15-0.488074784591193-0.590343908676236	chr12	28675078	28676092	+	0	NA	Intergenic	L1_Mur3|LINE|L1	557617	NM_001177964	68511	Mm.310284	NM_001177964		Dcdc2c	1110015M06Rik	doublecortin domain containing 2C	protein-coding
unique_peak2-39811-1-9--2.94898510510411-2.31132995230379	chrX	35931031	35931437	+	0	NA	Intergenic	Intergenic	-1861	NM_001110142	72584	Mm.327675	NM_028288		Cul4b	2700050M05Rik|AA409770|CUL-4B|mKIAA0695	cullin 4B	protein-coding
common_peak2-31352-20-22--0.03548717146582-0.301029995663994	chr8	84656149	84657127	+	0	NA	Intergenic	Intergenic	269847	NM_001254747	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak2-28285-22-12-0.946844386946312-1.31435121412491	chr4	129811327	129811849	+	0	NA	intron (NM_001163027, intron 6 of 8)	intron (NM_001163027, intron 6 of 8)	4207	NM_001163027	230777	Mm.246595	NM_198959	ENSMUSG00000028778	Hcrtr1	Ox1r	hypocretin (orexin) receptor 1	protein-coding
common_peak2-20749-9-6-0.382258484346616-1.11707584880836	chr10	111570927	111571363	+	0	NA	Intergenic	Intergenic	-31587	NM_178278	353025	Mm.194428	NM_178278	ENSMUSG00000035694	Caps2	D630005B03Rik	calcyphosphine 2	protein-coding
common_peak1-12075-44-62--0.155387088931382-0.346662596190348	chr17	24414616	24415456	+	0	NA	intron (NM_001031621, intron 25 of 29)	intron (NM_001031621, intron 25 of 29)	-26682	NM_007634	12449	Mm.77695	NM_007634	ENSMUSG00000072082	Ccnf	CycF|Fbxo1	cyclin F	protein-coding
unique_peak1-1765-7-5-0.214128329577033-1.01466476204226	chr13	110217572	110218103	+	0	NA	intron (NM_011056, intron 3 of 16)	intron (NM_011056, intron 3 of 16)	102899	NR_030644	100124489		NR_030644		Mir582	Mirn582|mmu-mir-582	microRNA 582	ncRNA
unique_peak2-39152-10-18--0.891512168434816-0.804350088532826	chr8	88198999	88199940	+	0	NA	intron (NM_001081324, intron 1 of 8)	intron (NM_001081324, intron 1 of 8)	15439	NM_001081324	74513	Mm.126079	NM_001081324	ENSMUSG00000036902	Neto2	5530601C23Rik|AI854825|BTCL2	neuropilin (NRP) and tolloid (TLL)-like 2	protein-coding
common_peak2-30642-13-12-0.0780323124966764-0.334470287753051	chr7	98384652	98385272	+	0	NA	intron (NM_011807, intron 1 of 22)	intron (NM_011807, intron 1 of 22)	145666	NM_011807	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
unique_peak2-38109-9-10--0.269818212233077-1.05503135781948	chr6	72241296	72241840	+	0	NA	Intergenic	Lx3_Mus|LINE|L1	-13036	NM_001282071	20388	Mm.46033	NM_147779	ENSMUSG00000056370	Sftpb	AI562151|SF-B|SP-B|Sftp-3|Sftp3	surfactant associated protein B	protein-coding
common_peak2-21409-37-44-0.034139975156144-0.310681778627721	chr11	83472541	83473837	+	0	NA	Intergenic	Intergenic	-2897	NM_013652	20303	Mm.244263	NM_013652	ENSMUSG00000018930	Ccl4	AT744.1|Act-2|MIP-1B|Mip1b|Scya4	chemokine (C-C motif) ligand 4	protein-coding
common_peak1-9154-12-8-0.478850983645327-0.562038191119709	chr11	77215482	77216124	+	0	NA	intron (NM_001291190, intron 3 of 13)	ID2|SINE|ID	54021	NM_001291190	237860	Mm.440381	NM_177710	ENSMUSG00000037926	Ssh2	SSH-2|SSH-2L|mSSH-2L	slingshot homolog 2 (Drosophila)	protein-coding
unique_peak1-6167-16-7-1.11826364226806-1.23399803405144	chr6	145116000	145116772	+	0	NA	intron (NM_001281980, intron 12 of 18)	RSINE1|SINE|B4	43104	NM_177222	320662	Mm.207779	NM_177222	ENSMUSG00000043541	Casc1	A230084G12Rik|Las1	cancer susceptibility candidate 1	protein-coding
common_peak2-27992-12-11-0.0638134843664826-0.337263207250336	chr4	44234175	44234622	+	0	NA	promoter-TSS (NR_039565)	promoter-TSS (NR_039565)	-259	NR_039565	100628618		NR_039565	miRBase:MI0018014	Mir5106	mmu-mir-5106|mu-mir-5106	microRNA 5106	ncRNA
common_peak2-32093-8-14--0.901668177660948-0.660903317613906	chr9	98498832	98499250	+	0	NA	intron (NM_025485, intron 1 of 7)	intron (NM_025485, intron 1 of 7)	3057	NM_025485	64655	Mm.17949	NM_025485	ENSMUSG00000032459	Mrps22	3100002P07Rik|Rpms22	mitochondrial ribosomal protein S22	protein-coding
unique_peak1-4303-8-3-1.00522241794757-1.39487600375387	chr2	146534315	146534764	+	0	NA	Intergenic	Intergenic	-147086	NM_001033298	228730	Mm.292352	NM_001033298	ENSMUSG00000074749	Kiz	Gm114|Ncrna00153|Plk1s1	kizuna centrosomal protein	protein-coding
common_peak2-19965-20-13-0.680719862533589-0.809260849721102	chr1	133057189	133057824	+	0	NA	intron (NM_001136070, intron 6 of 14)	RSINE1|SINE|B4	7722	NM_010709	16865	Mm.276294	NM_010709	ENSMUSG00000026427	Eif2d	D1Ertd5e|Lgtn	eukaryotic translation initiation factor 2D	protein-coding
unique_peak2-34135-7-21--1.66034078833911-1.89173646618541	chr13	23533906	23534249	+	0	NA	Intergenic	Intergenic	-11191	NR_015492	320842	Mm.487476	NR_015492	ENSMUSG00000085024	C230035I16Rik	-	RIKEN cDNA C230035I16 gene	ncRNA
common_peak2-25616-69-140--0.544408905140061-2.00456418241193	chr19	8988619	8991616	+	0	NA	exon (NM_001293621, exon 24 of 24)	exon (NM_001293621, exon 24 of 24)	-4766	NM_024256	72727	Mm.259	NM_024256	ENSMUSG00000071649	B3gat3	2810405M13Rik	beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)	protein-coding
common_peak1-16087-15-7-1.01216475055566-1.08658567012551	chr5	64343496	64344244	+	0	NA	intron (NM_145923, intron 1 of 6)	intron (NM_145923, intron 1 of 6)	16266	NM_145923	100532	Mm.243632	NM_145923	ENSMUSG00000047881	Rell1	AA536743	RELT-like 1	protein-coding
unique_peak2-38686-7-16--1.28837201095215-1.08658567012551	chr7	101310471	101310866	+	0	NA	Intergenic	RLTR46|LTR|ERVK	1082279	NM_021427	58238	Mm.113787	NM_021427		Fam181b	A830059I20Rik|AB041569	family with sequence similarity 181, member B	protein-coding
common_peak2-21494-17-9-0.896368243317676-1.09394599973099	chr11	88629304	88629902	+	0	NA	Intergenic	Intergenic	49646	NR_038058	193280	Mm.396842	NR_038058		C030037D09Rik	9330160M04	RIKEN cDNA C030037D09 gene	ncRNA
unique_peak2-33929-4-9--1.34538860874061-1.36011389749466	chr12	70453082	70453655	+	0	NA	intron (NM_025441, intron 5 of 32)	intron (NM_025441, intron 5 of 32)	4795	NM_025441	66244	Mm.46705	NM_025441	ENSMUSG00000020982	Nemf	1500011I12Rik|4933405E14Rik|Sdccag1	nuclear export mediator factor	protein-coding
common_peak1-7919-20-25--0.212364933549899-0.342639663781856	chr1	138856172	138856940	+	0	NA	intron (NM_030676, intron 1 of 8)	B1_Mus2|SINE|Alu	469	NM_030676	26424	Mm.16794	NM_030676	ENSMUSG00000026398	Nr5a2	AU020803|D1Ertd308e|Ftf|LRH-1|UF2-H3B	nuclear receptor subfamily 5, group A, member 2	protein-coding
common_peak1-10004-19-38--0.882714892200562-1.37991291380345	chr13	4770894	4771647	+	0	NA	Intergenic	Intergenic	-162860	NM_018859	56043	Mm.251908	NM_018859	ENSMUSG00000045410	Akr1e1	1810061I10Rik|Akr1e2	aldo-keto reductase family 1, member E1	protein-coding
common_peak1-7745-85-68-0.846878791346482-3.89984827620811	chr1	90518387	90520745	+	0	NA	Intergenic	Intergenic	71474	NR_037971	100503197	Mm.99352	NR_037971		Gm19589	-	predicted gene, 19589	ncRNA
unique_peak1-7183-8-3-1.00522241794757-1.39487600375387	chr9	62816370	62816789	+	0	NA	intron (NM_019663, intron 1 of 13)	Charlie1a|DNA|MER1_type	12107	NM_019663	56469	Mm.431253	NM_019663	ENSMUSG00000032405	Pias1	2900068C24Rik|Ddxbp1|GBP	protein inhibitor of activated STAT 1	protein-coding
unique_peak2-38042-5-10--1.16381195464315-1.33892459842472	chr6	38842714	38843296	+	0	NA	Intergenic	Intergenic	-16816	NM_001294143	15258	Mm.23790	NM_010433	ENSMUSG00000061436	Hipk2	1110014O20Rik|B230339E18Rik|Stank	homeodomain interacting protein kinase 2	protein-coding
common_peak2-32265-19-46--1.15190152501595-2.37649337096008	chrX	12086768	12087759	+	0	NA	Intergenic	MLT1C|LTR|MaLR	-77622	NM_027439	70495	Mm.25148	NM_027439	ENSMUSG00000031007	Atp6ap2	(P)RR|5730403E06Rik|APT6M8-9|ATP6M8-9|Atp6ip2|M8-9	ATPase, H+ transporting, lysosomal accessory protein 2	protein-coding
common_peak2-25163-21-41--0.822828157512525-1.27781945862486	chr18	53244984	53246177	+	0	NA	Intergenic	Intergenic	-90439	NM_026386	67804	Mm.252171	NM_026386	ENSMUSG00000034484	Snx2	0610030A03Rik	sorting nexin 2	protein-coding
common_peak1-14818-27-21-0.532114332257938-0.800403172662453	chr3	90549862	90550700	+	0	NA	Intergenic	L1VL4|LINE|L1	19453	NM_207263	384997	Mm.316644	NM_207263	ENSMUSG00000042250	Pglyrp4	Gm1478|Gm413	peptidoglycan recognition protein 4	protein-coding
unique_peak1-6289-11-3-1.50869358425161-1.95434855131066	chr7	29272912	29273442	+	0	NA	Intergenic	Intergenic	-8783	NR_033605	70001	Mm.417851	NR_033605		1700028B04Rik	-	NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8 pseudogene	pseudo
common_peak1-17513-8-8--0.164702583494742-1.00793137938329	chr7	27489829	27490238	+	0	NA	Intergenic	Lx4A|LINE|L1	-18584	NM_001081148	243881	Mm.294678	NM_001081148	ENSMUSG00000040650	Cyp2b23	EG243881	cytochrome P450, family 2, subfamily b, polypeptide 23	protein-coding
unique_peak1-2031-8-0-3.00522241794757-2.70926996097583	chr15	12367995	12368491	+	0	NA	intron (NM_001081064, intron 4 of 23)	intron (NM_001081064, intron 4 of 23)	116992	NM_025673	66629	Mm.157655	NM_025673	ENSMUSG00000022200	Golph3	4733401N08Rik|5730410D03Rik|AW413496	golgi phosphoprotein 3	protein-coding
common_peak1-16733-11-12--0.191746133889479-0.310474156842889	chr6	31086776	31087531	+	0	NA	intron (NR_110471, intron 3 of 3)	intron (NR_110471, intron 3 of 3)	-74060	NR_029532	387223		NR_029532	miRBase:MI0000143	Mir29b-1	Mirn29b|Mirn29b-1	microRNA 29b-1	ncRNA
common_peak1-19035-40-68--0.449548774027071-0.830196118985429	chr9	64736849	64738156	+	0	NA	exon (NM_001162917, exon 21 of 35)	exon (NM_001162917, exon 21 of 35)	61912	NM_144813	214111	Mm.156124	NM_144813	ENSMUSG00000034452	Slc24a1	-	solute carrier family 24 (sodium/potassium/calcium exchanger), member 1	protein-coding
common_peak1-15204-37-41-0.133675648707058-0.363463023472118	chr4	32799801	32800937	+	0	NA	intron (NM_001081392, intron 39 of 101)	intron (NM_001081392, intron 39 of 101)	56275	NM_001081392	100019	Mm.24627	NM_133874	ENSMUSG00000058006	Mdn1	4833432B22Rik|A130070M06|AA958993|D4Abb1e|Gm135	midasin homolog (yeast)	protein-coding
unique_peak1-2894-8-4-0.683294323060208-1.21878474469819	chr17	44710159	44710679	+	0	NA	intron (NR_073425, intron 5 of 5)	intron (NR_073425, intron 5 of 5)	162706	NR_073425	12393	Mm.391013	NM_009820	ENSMUSG00000039153	Runx2	AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a	runt related transcription factor 2	protein-coding
unique_peak2-33636-0-5--3.42509343119537-1.32905871926422	chr11	98486720	98487049	+	0	NA	promoter-TSS (NM_001007461)	promoter-TSS (NM_001007461)	-790	NM_001007461	450219	Mm.371065	NM_001007461	ENSMUSG00000064224	Gsdma3	Bsk|Dfl|Fgn|Gsdm1l|Gsdm3|Rco2|Rim3	gasdermin A3	protein-coding
unique_peak1-3731-9-4-0.867685311516858-1.36011389749466	chr19	46641639	46642139	+	0	NA	intron (NM_019718, intron 1 of 5)	intron (NM_019718, intron 1 of 5)	5686	NM_019718	56350	Mm.22085	NM_019718	ENSMUSG00000025035	Arl3	-	ADP-ribosylation factor-like 3	protein-coding
common_peak2-26654-21-34--0.559793751678731-0.677299098039755	chr2	120970007	120970915	+	0	NA	intron (NM_001290812, intron 3 of 8)	intron (NM_001290812, intron 3 of 8)	2632	NM_029475	75894	Mm.384805	NM_029475	ENSMUSG00000027259	Adal	4930578F03Rik	adenosine deaminase-like	protein-coding
common_peak2-26737-10-9-0.0344872501214071-1.05503135781948	chr2	132094116	132094570	+	0	NA	intron (NM_138651, intron 1 of 12)	L1_Mus1|LINE|L1	5459	NM_138651	110911	Mm.284503	NM_138651	ENSMUSG00000058793	Cds2	5730450N06Rik|5730460C18Rik|AI854580|D2Wsu127e	CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2	protein-coding
unique_peak1-6717-33-4-3.00940946763817-7.72507165791725	chr8	40655052	40656368	+	0	NA	Intergenic	Intergenic	72322	NM_031195	20288	Mm.239291	NM_031195	ENSMUSG00000025044	Msr1	MRS-A|MSR|MSR-A|SR-AI|SR-AII|Scara1|Scvr	macrophage scavenger receptor 1	protein-coding
common_peak2-26009-16-20--0.274053780510699-0.353907621462756	chr19	55868126	55868783	+	0	NA	intron (NM_001142920, intron 4 of 11)	intron (NM_001142920, intron 4 of 11)	52154	NM_001142923	21416	Mm.139815	NM_009333	ENSMUSG00000024985	Tcf7l2	TCF4B|TCF4E|Tcf-4|Tcf4|mTcf-4B|mTcf-4E	transcription factor 7 like 2, T cell specific, HMG box	protein-coding
common_peak1-19251-22-38--0.638118113774844-0.887741995158868	chr9	110407372	110408245	+	0	NA	intron (NM_001163569, intron 10 of 20)	PB1D9|SINE|Alu	-27293	NM_001081340	235626	Mm.288949	NM_001081340	ENSMUSG00000044791	Setd2	4921524K10Rik|BC031601|KMT3A	SET domain containing 2	protein-coding
common_peak2-27024-26-15-0.927899092158462-1.40782320807777	chr2	174075047	174075815	+	0	NA	Intergenic	ORR1A2-int|LTR|MaLR	17195	NR_029646	723906		NR_029646	miRBase:MI0000394	Mir296	Mirn296|mmu-mir-296	microRNA 296	ncRNA
common_peak1-7650-19-7-1.40268732666169-1.89173646618542	chr1	74027461	74028164	+	0	NA	intron (NM_001289895, intron 17 of 32)	(CA)n|Simple_repeat|Simple_repeat	-116772	NR_045311	109198	Mm.359721	NR_045311		6030407O03Rik	-	RIKEN cDNA 6030407O03 gene	ncRNA
unique_peak2-39694-5-18--1.95230784944944-1.99473478107052	chr9	110789787	110790608	+	0	NA	intron (NM_146228, intron 8 of 26)	intron (NM_146228, intron 8 of 26)	7371	NM_001146060	235633	Mm.86338	NM_146228	ENSMUSG00000044037	Als2cl	79H19D|79H19E|BC022645|D930044G19Rik|mRn.49018	ALS2 C-terminal like	protein-coding
unique_peak2-34381-5-8--0.874305337448166-1.10484139239135	chr13	115101069	115101695	+	0	NA	intron (NM_010887, intron 3 of 4)	intron (NM_010887, intron 3 of 4)	76920	NM_010887	17993	Mm.253142	NM_010887	ENSMUSG00000021764	Ndufs4	6720411N02Rik|C1-18k	NADH dehydrogenase (ubiquinone) Fe-S protein 4	protein-coding
common_peak2-20802-29-51--0.588149637525981-0.951203349073955	chr10	126927887	126929107	+	0	NA	intron (NM_027900, intron 19 of 23)	intron (NM_027900, intron 19 of 23)	-10276	NM_177707	237611	Mm.32087	NM_177707	ENSMUSG00000040287	Stac3	9830125E18	SH3 and cysteine rich domain 3	protein-coding
common_peak2-23742-13-7-0.778472030637769-0.817533494790411	chr15	97772635	97773131	+	0	NA	Intergenic	RMER19B|LTR|ERVK	-21777	NM_201359	380967	Mm.196630	NM_201359	ENSMUSG00000052369	Tmem106c	AI046681|BC046621|D15Ertd405e	transmembrane protein 106C	protein-coding
common_peak2-20702-49-59-0.0993932274166651-0.345177777143024	chr10	93342342	93343770	+	0	NA	intron (NM_019648, intron 3 of 11)	intron (NM_019648, intron 3 of 11)	10891	NM_019648	56307	Mm.289329	NM_019648	ENSMUSG00000036112	Metap2	4930584B20Rik|A930035J23Rik|AI047573|AL024412|AU014659|Amp2|Mnpep|p67|p67eIF2	methionine aminopeptidase 2	protein-coding
common_peak1-18274-21-31--0.430510734733764-0.49501414494053	chr8	35494834	35495738	+	0	NA	Intergenic	Lx8|LINE|L1	208084	NR_040706	330734	Mm.149998	NR_040706		B930018H19Rik	B930018H19	RIKEN cDNA B930018H19 gene	ncRNA
unique_peak1-5042-11-8-0.338768582809301-1.14218153353838	chr4	133879245	133879850	+	0	NA	intron (NM_001039048, intron 5 of 8)	intron (NM_001039048, intron 5 of 8)	8512	NM_001039048	433766	Mm.331961	NM_001039048	ENSMUSG00000028834	Trim63	MuRF1|RF1|Rnf28	tripartite motif-containing 63	protein-coding
unique_peak1-5818-8-2-1.42025991722641-1.65811743852845	chr6	71208048	71208431	+	0	NA	intron (NM_001160127, intron 1 of 9)	B1_Mus1|SINE|Alu	4036	NM_001160127	12180	Mm.234274	NM_009762	ENSMUSG00000055027	Smyd1	4632404M21Rik|Bop|C78565|Zmynd18	SET and MYND domain containing 1	protein-coding
unique_peak1-2486-7-6--0.00826409175941478-0.97990265578305	chr16	8671586	8672056	+	0	NA	intron (NM_025821, intron 1 of 3)	CpG	425	NM_025821	52502	Mm.142095	NM_025821	ENSMUSG00000008393	Carhsp1	1200011K09Rik|Crhsp-24|D16Ertd465e	calcium regulated heat stable protein 1	protein-coding
common_peak1-17020-21-21-0.110057646628938-0.344491671143527	chr6	91116167	91116971	+	0	NA	intron (NM_144919, intron 5 of 9)	intron (NM_144919, intron 5 of 9)	9760	NM_144919	232232	Mm.206218	NM_144919	ENSMUSG00000034245	Hdac11	-	histone deacetylase 11	protein-coding
unique_peak1-149-21-2-2.98452676454508-5.06563262809273	chr1	71936079	71936962	+	0	NA	intron (NR_027658, intron 2 of 2)	intron (NR_027658, intron 2 of 2)	1834	NR_027659	667931	Mm.214128	NR_027658		Gm8883	EG667931|Gm554	predicted gene 8883	ncRNA
common_peak2-21306-8-6-0.197867495889966-1.03789460276074	chr11	74555184	74555601	+	0	NA	Intergenic	Intergenic	-17506	NM_013625	18472	Mm.397111	NM_013625	ENSMUSG00000020745	Pafah1b1	LIS-1|Lis1|MMS10-U|Mdsh|Ms10u|Pafaha	platelet-activating factor acetylhydrolase, isoform 1b, subunit 1	protein-coding
common_peak1-11448-10-11--0.228547155712387-0.31137425193576	chr15	101233093	101233666	+	0	NA	Intergenic	Intergenic	-9455	NM_033073	110310	Mm.486285	NM_033073		Krt7	D15Wsu77e|K7|Krt2-7	keratin 7	protein-coding
common_peak2-28384-35-42-0.00510550376040619-0.30358472802154	chr4	139192818	139193788	+	0	NA	intron (NM_175438, intron 7 of 14)	intron (NM_175438, intron 7 of 14)	-6654	NR_105987	102465617		NR_105987		Mir7020	mmu-mir-7020	microRNA mir-7020	ncRNA
common_peak1-10310-8-7-0.00522241794757061-1.00793137938329	chr13	67375316	67375841	+	0	NA	Intergenic	L1Md_A|LINE|L1	-3952	NR_033540	100038627	Mm.387089	NR_033540		F630042J09Rik	ENSMUSG00000074823	RIKEN cDNA F630042J09 gene	ncRNA
unique_peak2-33435-7-6--0.00826409175941478-0.97990265578305	chr11	60936115	60936472	+	0	NA	Intergenic	Intergenic	-18044	NM_021349	57916	Mm.265915	NM_021349	ENSMUSG00000010142	Tnfrsf13b	1200009E08Rik|Taci	tumor necrosis factor receptor superfamily, member 13b	protein-coding
common_peak1-8385-13-10-0.319040412000471-0.446472590016315	chr10	62601957	62602485	+	0	NA	intron (NM_182992, intron 10 of 19)	L1VL2|LINE|L1	39317	NM_016864	53404	Mm.228661	NM_016864	ENSMUSG00000036816	Atoh7	Math5|bHLHa13	atonal homolog 7 (Drosophila)	protein-coding
common_peak2-24421-18-28--0.54506184389922-0.591915184368642	chr17	17179199	17179953	+	0	NA	Intergenic	L1_Mur2|LINE|L1	-21491	NM_001005358	449000	Mm.483718	NM_001005358	ENSMUSG00000096696	Zfp960	-	zinc finger protein 960	protein-coding
common_peak1-9840-13-12-0.0780323124966764-0.334470287753051	chr12	76837659	76838273	+	0	NA	Intergenic	Intergenic	-1250	NM_030750	81535	Mm.280199	NM_030750	ENSMUSG00000021054	Sgpp1	AI463453|SPP|SPP1|Spph1	sphingosine-1-phosphate phosphatase 1	protein-coding
common_peak1-7933-13-11-0.193509529916613-0.379391706698377	chr1	151343818	151344480	+	0	NA	Intergenic	L1Md_T|LINE|L1	464265	NM_008869	18783	Mm.4186	NM_008869	ENSMUSG00000056220	Pla2g4a	Pla2g4|cPLA2|cPLA2alpha	phospholipase A2, group IVA (cytosolic, calcium-dependent)	protein-coding
unique_peak1-6978-7-0-2.79909083029819-2.40823996531185	chr8	119705649	119706078	+	0	NA	intron (NM_001081151, intron 1 of 10)	intron (NM_001081151, intron 1 of 10)	23828	NM_001081151	209239	Mm.132992	NM_001081151	ENSMUSG00000052557	Gan	A330045G18|gigaxonin	giant axonal neuropathy	protein-coding
unique_peak1-5191-15-2-2.4272022498345-3.53487848679804	chr5	32200243	32200919	+	0	NA	intron (NM_181281, intron 5 of 10)	intron (NM_181281, intron 5 of 10)	200158	NM_181282	107976	Mm.482126	NM_144541	ENSMUSG00000052139	Bre	6030405P19Rik|AI429776|B830038C02Rik	brain and reproductive organ-expressed protein	protein-coding
unique_peak2-39644-6-17--1.60452689106201-1.49151883326343	chr9	104262545	104262967	+	0	NA	Intergenic	AT_rich|Low_complexity|Low_complexity	-22704	NM_207668	56318	Mm.19941	NM_019807	ENSMUSG00000032561	Acpp	5'-NT|A030005E02Rik|FRAP|Lap|PAP|Ppal	acid phosphatase, prostate	protein-coding
common_peak1-7854-35-28-0.573389263334932-0.994385396256653	chr1	132417008	132418419	+	0	NA	Intergenic	Intergenic	-58396	NM_010016	13136	Mm.101591	NM_010016	ENSMUSG00000026399	Cd55	Daf|Daf-GPI|Daf1|GPI-DAF	CD55 antigen	protein-coding
unique_peak1-450-19-5-1.81772482594053-2.59995804677862	chr1	166651033	166651847	+	0	NA	Intergenic	MIRc|SINE|MIR	-75423	NM_019759	56429	Mm.28935	NM_019759	ENSMUSG00000026574	Dpt	1810032B19Rik|5033416F05Rik|EQ-1|Eq1	dermatopontin	protein-coding
unique_peak2-37621-4-8--1.19338551529556-1.21878474469819	chr5	66080376	66080846	+	0	NA	intron (NM_001081321, intron 2 of 31)	intron (NM_001081321, intron 2 of 31)	8484	NM_001081321	71521	Mm.278974	NM_027818	ENSMUSG00000029202	Pds5a	9030416H16Rik|E230024D05Rik|mKIAA0648	PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	protein-coding
unique_peak1-6575-9-5-0.604650905683064-1.21398586181642	chr7	139357883	139358372	+	0	NA	Intergenic	Intergenic	-11703	NM_018867	55987	Mm.471654	NM_018867	ENSMUSG00000030862	Cpxm2	4632435C11Rik|CPX-2|Cpx2	carboxypeptidase X 2 (M14 family)	protein-coding
common_peak2-26634-15-12-0.311725032414564-0.425539671739611	chr2	119288817	119289333	+	0	NA	intron (NM_026574, intron 1 of 35)	B1_Mus2|SINE|Alu	14290	NM_026574	68142	Mm.330496	NM_026574	ENSMUSG00000034154	Ino80	2310079N15Rik|4632409L19Rik|Inoc1	INO80 homolog (S. cerevisiae)	protein-coding
common_peak1-14225-40-22-1.13541372669409-2.87302884942463	chr2	152696394	152697725	+	0	NA	intron (NM_001141977, intron 4 of 17)	B3|SINE|B2	6256	NR_049195	100885834		NR_049195	miRBase:MI0019190	Mir5622	mmu-mir-5622	microRNA mir-5622	ncRNA
common_peak1-16584-25-25-0.161410187204014-0.36542888694933	chr5	148361009	148362133	+	0	NA	Intergenic	Intergenic	119415	NM_028291	72587	Mm.320469	NM_028291	ENSMUSG00000029647	Pan3	2700050F09Rik|A430027N15Rik|AU014670	PAN3 polyA specific ribonuclease subunit homolog (S. cerevisiae)	protein-coding
common_peak1-14853-51-71--0.0950011758397391-0.326210013932454	chr3	95014812	95016478	+	0	NA	intron (NM_029885, intron 2 of 9)	ID_B1|SINE|B4	-5734	NR_108026	100504029	Mm.478537	NR_108026	ENSMUSG00000097167	Gm16740	-	predicted gene, 16740	ncRNA
common_peak1-13880-33-9-2.00940946763817-4.90247409987431	chr2	73528776	73530013	+	0	NA	intron (NM_001113246, intron 5 of 12)	intron (NM_001113246, intron 5 of 12)	-30914	NM_001166604	108699	Mm.257073	NM_029716	ENSMUSG00000056486	Chn1	0610007I19Rik|0710001E19Rik|1700112L09Rik|2900046J01Rik|AI413815|ARHGAP2	chimerin 1	protein-coding
unique_peak1-458-9-0-3.18961340640422-3.01029995663981	chr1	170535961	170536474	+	0	NA	Intergenic	L1Md_F3|LINE|L1	115443	NR_105766	102465178		NR_105766	miRBase:MI0021876	Mir6348	mmu-mir-6348	microRNA mir-6348	ncRNA
common_peak1-16832-70-48-1.00525707226019-4.09562722997012	chr6	50565978	50567866	+	0	NA	Intergenic	L1_Mus2|LINE|L1	-20333	NM_027564	70821	Mm.157323	NM_027564	ENSMUSG00000029828	4921507P07Rik	TISP74	RIKEN cDNA 4921507P07 gene	protein-coding
common_peak1-9490-31-43--0.234192947824174-0.398838069828027	chr11	107479246	107480248	+	0	NA	intron (NM_198298, intron 12 of 31)	intron (NM_198298, intron 12 of 31)	-19289	NR_105897	102465562		NR_105897		Mir6932	mmu-mir-6932	microRNA mir-6932	ncRNA
common_peak2-29637-92-117-0.209709034340923-0.611164403819789	chr6	57824201	57825583	+	0	NA	Intergenic	Intergenic	26092	NM_134178	171196	Mm.377175	NM_134178	ENSMUSG00000093501	Vmn1r22	V1rc23	vomeronasal 1 receptor 22	protein-coding
unique_peak1-2202-9-1-2.18961340640422-2.31132995230379	chr15	67120718	67121151	+	0	NA	intron (NR_045140, intron 5 of 8)	intron (NR_045140, intron 5 of 8)	62603	NR_045140	69334	Mm.63770	NR_045140		1700012I11Rik	-	RIKEN cDNA 1700012I11 gene	ncRNA
common_peak2-25093-125-122-0.681310873720311-4.16611661338631	chr18	36414352	36416759	+	0	NA	Intergenic	Intergenic	-25261	NM_008989	19290	Mm.231802	NM_008989		Pura	CAGER-1|Pur-alpha|ssCRE-BP	purine rich element binding protein A	protein-coding
common_peak1-13670-28-26-0.298071617657994-0.481798116163919	chr2	27916056	27917095	+	0	NA	Intergenic	Intergenic	23823	NM_010190	14134	Mm.182935	NM_010190	ENSMUSG00000026835	Fcnb	Fcn2	ficolin B	protein-coding
unique_peak1-4880-12-5-1.06381348436648-1.78669045979184	chr4	33260969	33261635	+	0	NA	exon (NM_001034867, exon 7 of 7)	exon (NM_001034867, exon 7 of 7)	15410	NM_001034867	242377	Mm.372465	NM_001034867		Pm20d2	Acy1l2|Gm424	peptidase M20 domain containing 2	protein-coding
common_peak2-22052-23-34--0.407515512435886-0.533344939162177	chr12	69892317	69893191	+	0	NA	Intergenic	L1MB7|LINE|L1	367419	NM_009093	20090	Mm.379006	NM_009093	ENSMUSG00000034892	Rps29	-	ribosomal protein S29	protein-coding
common_peak1-14511-36-42-0.0530563314656565-0.323497957212832	chr3	20154311	20155498	+	0	NA	intron (NM_029706, intron 9 of 10)	intron (NM_029706, intron 9 of 10)	-12824	NM_007753	12873	Mm.1135	NM_007753	ENSMUSG00000001865	Cpa3	MC-CPA|mMC-CPA	carboxypeptidase A3, mast cell	protein-coding
common_peak2-26049-11-6-0.701338662194009-1.32595962126035	chr2	25575408	25575846	+	0	NA	Intergenic	RLTR6-int|LTR|ERV1	13228	NM_023326	107771	Mm.330057	NM_023326	ENSMUSG00000049086	Bmyc	2900002K07Rik|AW060705|Mycb	brain expressed myelocytomatosis oncogene	protein-coding
unique_peak2-34244-1-5--2.2120195109379-1.32905871926422	chr13	55190746	55191095	+	0	NA	intron (NM_001293660, intron 2 of 12)	MTE-int|LTR|MaLR	10736	NM_011307	20184	Mm.259301	NM_011307	ENSMUSG00000025878	Uimc1	9430016E08Rik|D330018D10Rik|D630032M02Rik|RIP110|Rxrip110	ubiquitin interaction motif containing 1	protein-coding
common_peak2-27889-10-13--0.450939577048835-0.386243247519795	chr4	135986687	135987266	+	0	NA	intron (NM_001285484, intron 1 of 1)	PB1D10|SINE|Alu	6449	NM_001285484	15552	Mm.40573	NM_008309	ENSMUSG00000070687	Htr1d	5-HT-1D|5-HT1D|AI853647|Gpcr14|Htr1db	5-hydroxytryptamine (serotonin) receptor 1D	protein-coding
common_peak1-18168-11-14--0.398197011356905-0.379391706698377	chr8	13676697	13677207	+	0	NA	intron (NM_009025, intron 1 of 23)	intron (NM_009025, intron 1 of 23)	635	NM_009025	19414	Mm.18517	NM_009025	ENSMUSG00000031453	Rasa3	AI326412|C86362|E130011G04|GAPIII|scat	RAS p21 protein activator 3	protein-coding
unique_peak1-896-9-1-2.18961340640422-2.31132995230379	chr11	35945610	35946138	+	0	NA	intron (NM_011856, intron 12 of 28)	intron (NM_011856, intron 12 of 28)	-152283	NM_170779	211652	Mm.31267	NM_170779		Wwc1	AA408228|AU017197|BC037006|Kibra|mKIAA0869	WW, C2 and coiled-coil domain containing 1	protein-coding
common_peak2-27329-7-5-0.214128329577033-1.01466476204226	chr3	68534780	68535089	+	0	NA	Intergenic	L1Md_T|LINE|L1	39588	NM_008351	16159	Mm.103783	NM_008351	ENSMUSG00000027776	Il12a	IL-12p35|Il-12a|Ll12a|p35	interleukin 12a	protein-coding
common_peak1-9874-14-20--0.493101262421116-0.456667090758524	chr12	83688118	83688690	+	0	NA	Intergenic	RSINE1|SINE|B4	-29621	NM_015812	50779	Mm.153013	NM_015812	ENSMUSG00000021219	Rgs6	-	regulator of G-protein signaling 6	protein-coding
unique_peak2-37036-5-11--1.28934283672701-1.477227296591	chr3	131564908	131565435	+	0	NA	Intergenic	Intergenic	-183085	NM_020265	56811	Mm.103593	NM_020265	ENSMUSG00000028031	Dkk2	-	dickkopf homolog 2 (Xenopus laevis)	protein-coding
common_peak2-20738-11-34--1.62058943269335-2.97841939682983	chr10	102511578	102512619	+	0	NA	Intergenic	Intergenic	-20687	NM_172553	216285	Mm.19287	NM_172553	ENSMUSG00000036602	Alx1	AI314867|C130005I02|Cart1	ALX homeobox 1	protein-coding
common_peak2-32188-12-27--1.15857893696997-1.38791538138627	chr9	116383581	116384321	+	0	NA	Intergenic	Intergenic	-299470	NM_009371	21813	Mm.172346	NM_009371	ENSMUSG00000032440	Tgfbr2	1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII	transforming growth factor, beta receptor II	protein-coding
unique_peak2-39762-8-19--1.31670567693979-1.30305656033811	chrX	168673203	168674080	+	0	NA	Intergenic	Intergenic	-2256792	NR_029457	654820	Mm.34441	NM_001039559	ENSMUSG00000072844	G530011O06Rik	-	RIKEN cDNA G530011O06 gene	ncRNA
common_peak2-26377-86-176--0.491969756050644-2.1069101332301	chr2	45109059	45111059	+	0	NA	Intergenic	Intergenic	-141260	NM_015753	24136	Mm.440702	NM_015753	ENSMUSG00000026872	Zeb2	9130203F04Rik|D130016B08Rik|SIP1|Zfhx1b|Zfx1b|Zfxh1b	zinc finger E-box binding homeobox 2	protein-coding
common_peak1-9336-13-8-0.608547029195456-0.660903317613904	chr11	95858884	95859518	+	0	NA	intron (NM_009951, intron 2 of 14)	intron (NM_009951, intron 2 of 14)	8057	NM_009951	140486	Mm.294769	NM_009951	ENSMUSG00000013415	Igf2bp1	AL024068|AW549074|CRD-BP|Crdbp|D030026A21Rik|D11Moh40e|D11Moh45|IMP-1|Neilsen|ZBP-1|Zbp1	insulin-like growth factor 2 mRNA binding protein 1	protein-coding
unique_peak1-5921-10-0-3.35641534500877-3.31132995230379	chr6	89087196	89087741	+	0	NA	Intergenic	Intergenic	-3520	NR_121594	434065	Mm.333241	NM_001033491		Gm1965	AU018164|AU021089|AU023851|C86079	predicted gene 1965	ncRNA
common_peak2-26006-85-110-0.160987381774545-0.483022674584033	chr19	55742303	55744532	+	0	NA	intron (NR_045318, intron 2 of 3)	intron (NR_045318, intron 2 of 3)	33277	NR_045318	77594	Mm.329924	NR_045318	ENSMUSG00000097632	4930552P12Rik	-	RIKEN cDNA 4930552P12 gene	ncRNA
unique_peak2-34113-3-11--1.99894559068043-1.95434855131066	chr13	21722021	21722520	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	9120	NM_146542	218066	Mm.484775	NM_146542	ENSMUSG00000036658	Olfr11	M49|MOR256-11|ORL121	olfactory receptor 11	protein-coding
common_peak1-11895-59-63-0.325364000872578-0.740919593040607	chr17	33684561	33685681	+	0	NA	intron (NM_172619, intron 17 of 24)	ORR1A3|LTR|MaLR	-7531	NM_053214	17916	Mm.42019	NM_053214	ENSMUSG00000024300	Myo1f	C330006B10Rik	myosin IF	protein-coding
unique_peak1-5965-8-2-1.42025991722641-1.65811743852845	chr6	93334241	93334699	+	0	NA	Intergenic	Intergenic	443894	NR_015530	330385	Mm.483472	NR_015530	ENSMUSG00000097462	9530026P05Rik	B430306B02	RIKEN cDNA 9530026P05 gene	ncRNA
common_peak2-19803-24-49--0.850646287007008-1.56058662248874	chr1	88007940	88008652	+	0	NA	intron (NM_008311, intron 1 of 3)	intron (NM_008311, intron 1 of 3)	249	NM_008311	15559	Mm.439747	NM_008311	ENSMUSG00000026228	Htr2b	5-HT2B|AJ012488|AV377389	5-hydroxytryptamine (serotonin) receptor 2B	protein-coding
common_peak1-10371-19-37--0.845240186781899-1.27201509741564	chr13	92530873	92531689	+	0	NA	intron (NM_009027, intron 9 of 23)	intron (NM_009027, intron 9 of 23)	370168	NM_009027	19418	Mm.248630	NM_009027		Rasgrf2	6330417G04Rik|AW048350|Grf2|Ras-GRF2	RAS protein-specific guanine nucleotide-releasing factor 2	protein-coding
unique_peak2-33168-7-7--0.200909169701811-0.97990265578305	chr10	94575177	94575480	+	0	NA	Intergenic	Intergenic	-168116	NM_018797	54712	Mm.256712	NM_018797	ENSMUSG00000074785	Plxnc1	2510048K12Rik|AW742158|CD232|Vespr	plexin C1	protein-coding
common_peak1-17038-26-22-0.404337136101449-0.569352520859861	chr6	92214188	92215124	+	0	NA	Intergenic	B3|SINE|B2	-20012	NM_009426	22044	Mm.1363	NM_009426	ENSMUSG00000005892	Trh	Pro-TRH|Trf	thyrotropin releasing hormone	protein-coding
common_peak1-8518-12-8-0.478850983645327-0.562038191119709	chr10	84621808	84622314	+	0	NA	intron (NM_007771, intron 1 of 12)	B4A|SINE|B4	25738	NM_007771	12952	Mm.26237	NM_007771	ENSMUSG00000020038	Cry1	AU020726|AU021000|Phll1	cryptochrome 1 (photolyase-like)	protein-coding
unique_peak2-33811-4-7--1.02346051385325-1.09384600808989	chr11	121204344	121204725	+	0	NA	intron (NM_025793, intron 2 of 9)	B1_Mus1|SINE|Alu	11227	NM_025793	66840	Mm.103986	NM_025793	ENSMUSG00000025173	Wdr45b	0610008N23Rik|AA408735|D16Bwg0193e|WIPI-3|Wdr45l	WD repeat domain 45B	protein-coding
common_peak2-19774-10-12--0.344024373132323-0.340565874754526	chr1	82795512	82796013	+	0	NA	Intergenic	MER102a|DNA|MER1_type	-30731	NM_025453	66261	Mm.46325	NM_025453	ENSMUSG00000026149	Tm4sf20	1810018L02Rik	transmembrane 4 L six family member 20	protein-coding
common_peak1-17390-53-52-0.41305255785273-0.940907383351645	chr7	141327134	141328387	+	0	NA	intron (NM_007400, intron 2 of 22)	MTE2b|LTR|MaLR	89020	NM_007400	11489	Mm.439714	NM_007400	ENSMUSG00000054555	Adam12	Mltna|mKIAA4001	a disintegrin and metallopeptidase domain 12 (meltrin alpha)	protein-coding
common_peak2-21882-28-28-0.194978124693891-0.390124689062469	chr12	102743233	102744339	+	0	NA	intron (NM_173023, intron 10 of 26)	L1Md_F2|LINE|L1	100903	NM_173023	271036	Mm.84218	NM_173023	ENSMUSG00000047014	Catsperb	4931410B03|4932415G16Rik	catsper channel auxiliary subunit beta	protein-coding
common_peak2-19970-11-9-0.186765489364251-0.344532117358383	chr1	133209711	133210153	+	0	NA	intron (NM_001081011, intron 17 of 22)	L1MA4|LINE|L1	-33792	NM_019777	56489	Mm.386783	NM_019777	ENSMUSG00000042349	Ikbke	AW558201|IKK-i|IKKepsilon|Ikki	inhibitor of kappaB kinase epsilon	protein-coding
unique_peak1-3845-8-5-0.420259917226415-1.10484139239135	chr2	4917114	4917623	+	0	NA	intron (NM_027290, intron 14 of 19)	RCHARR1|DNA|MER1_type	16469	NM_027290	70024	Mm.23828	NM_027290	ENSMUSG00000026669	Mcm10	2410041F14Rik|AU018508|C330019M07Rik|C79164	minichromosome maintenance deficient 10 (S. cerevisiae)	protein-coding
common_peak1-11739-27-9-1.66961785600787-3.27210358356897	chr16	34680901	34681871	+	0	NA	Intergenic	(TTTTG)n|Simple_repeat|Simple_repeat	-9316	NM_172824	239839	Mm.272045	NM_172824	ENSMUSG00000022833	Ccdc14	G630039H03Rik	coiled-coil domain containing 14	protein-coding
common_peak2-24898-32-53--0.475795482943808-0.765450243834444	chr17	84085229	84086519	+	0	NA	Intergenic	Intergenic	-19629	NM_001171054	116871	Mm.277668	NM_054082	ENSMUSG00000055817	Mta3	1110002J22Rik|mKIAA1266	metastasis associated 3	protein-coding
common_peak1-8282-8-9--0.316705676939792-1.03275496310833	chr10	26013912	26014430	+	0	NA	intron (NM_172787, intron 17 of 21)	L1Md_F3|LINE|L1	64658	NM_001115154	268288	Mm.213322	NM_001013766	ENSMUSG00000051354	Samd3	Gm623	sterile alpha motif domain containing 3	protein-coding
unique_peak1-1072-8-2-1.42025991722641-1.65811743852845	chr11	84828475	84828931	+	0	NA	intron (NM_001029934, intron 26 of 33)	PB1D10|SINE|Alu	57447	NM_007607	12351	Mm.1641	NM_007607	ENSMUSG00000000805	Car4	AW456718|Ca4	carbonic anhydrase 4	protein-coding
unique_peak2-38295-4-7--1.02346051385325-1.09384600808989	chr6	135254111	135254527	+	0	NA	Intergenic	B4|SINE|B4	6083	NM_029595	76400	Mm.293018	NM_029595		Pbp2	1700023A18Rik|AI326308|Pebp-2|Pebp2	phosphatidylethanolamine binding protein 2	protein-coding
common_peak2-30716-17-17-0.0483713367627256-0.325169893479371	chr7	113418657	113419481	+	0	NA	Intergenic	L1VL4|LINE|L1	48973	NR_030720	668128	Mm.484022	NR_030720		Gm8989	EG668128|Gm21911	very large inducible GTPase 1 pseudogene	pseudo
common_peak2-21044-41-62--0.276131218651257-0.491755066901284	chr11	35979377	35980870	+	0	NA	intron (NM_001290702, intron 7 of 27)	intron (NM_001290702, intron 7 of 27)	-186532	NM_170779	211652	Mm.31267	NM_170779		Wwc1	AA408228|AU017197|BC037006|Kibra|mKIAA0869	WW, C2 and coiled-coil domain containing 1	protein-coding
common_peak1-17662-12-16--0.4386868561627-0.368541233333383	chr7	64155869	64156381	+	0	NA	intron (NM_008074, intron 5 of 9)	RMER17C|LTR|ERVK	486116	NM_008074	14407	Mm.434343	NM_008074		Gabrg3	B230362M20Rik|Gabrg-3	gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3	protein-coding
unique_peak1-6346-8-2-1.42025991722641-1.65811743852845	chr7	58692933	58693451	+	0	NA	Intergenic	Intergenic	-73207	NR_073508	233246	Mm.254431	NM_177694	ENSMUSG00000055489	Ano5	9330162L24|Gdd1|Tmem16e	anoctamin 5	protein-coding
unique_peak1-3930-9-2-1.60465090568306-1.87199725847353	chr2	27232597	27233078	+	0	NA	intron (NM_009500, intron 2 of 27)	intron (NM_009500, intron 2 of 27)	49508	NM_009500	22325	Mm.179011	NM_009500	ENSMUSG00000009621	Vav2	2810040F13Rik|AI847175	vav 2 oncogene	protein-coding
common_peak2-20228-15-16--0.075298090694683-0.301029995663976	chr1	181004622	181005356	+	0	NA	intron (NM_027188, intron 8 of 11)	RLTR23|LTR|ERV1	443145	NM_027188	69726	Mm.222338	NM_027188		Smyd3	2410008A19Rik|Zmynd1	SET and MYND domain containing 3	protein-coding
unique_peak1-2074-11-0-3.50869358425161-3.61235994796777	chr15	36669788	36670365	+	0	NA	Intergenic	Intergenic	50611	NM_001253807	22631	Mm.3360	NM_011740	ENSMUSG00000022285	Ywhaz	1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	protein-coding
common_peak1-16463-7-12--0.901348887842903-1.31827279259406	chr5	136566819	136567328	+	0	NA	exon (NM_001039103, exon 3 of 20)	exon (NM_001039103, exon 3 of 20)	7287	NM_001039103	54153	Mm.290655	NM_133914	ENSMUSG00000004952	Rasa4	AA793972|AW112107|BB079060|CAPRI|GAPL	RAS p21 protein activator 4	protein-coding
common_peak2-26050-43-54-0.0012034719990428-0.303022200133692	chr2	25607662	25608666	+	0	NA	Intergenic	Intergenic	-12925	NM_010694	16820	Mm.4632	NM_010694	ENSMUSG00000026936	Lcn3	Vnsp1	lipocalin 3	protein-coding
common_peak2-23983-9-7-0.18961340640422-1.05908390183068	chr16	17939216	17939673	+	0	NA	Intergenic	Intergenic	-11132	NM_153150	13358	Mm.229291	NM_153150	ENSMUSG00000003528	Slc25a1	1300019P08Rik|2610100G11Rik|AI194714|Ctp|Dgsj|Slc20a3	solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1	protein-coding
common_peak1-8152-109-150-0.147754942562123-0.499092038117437	chr1	191717273	191719031	+	0	NA	intron (NM_026796, intron 5 of 11)	intron (NM_026796, intron 5 of 11)	28015	NM_026796	226830	Mm.156895	NM_026796	ENSMUSG00000026603	Smyd2	1110020E07Rik|4930402C15|KMT3C|Zmynd14	SET and MYND domain containing 2	protein-coding
common_peak2-29212-40-50--0.013449659220397-0.303180003474857	chr5	137115384	137116541	+	0	NA	Intergenic	Intergenic	-53054	NM_021611	59310	Mm.5178	NM_021611	ENSMUSG00000005474	Myl10	1700027I08Rik|Mylc2pl|PLRLC|PLRLC-A|PLRLC-B|PLRLC-C	myosin, light chain 10, regulatory	protein-coding
common_peak2-30110-33-44--0.160515533804146-0.342407020751092	chr6	135322208	135323577	+	0	NA	intron (NM_001288627, intron 1 of 4)	intron (NM_001288627, intron 1 of 4)	5381	NM_001288627	13730	Mm.182785	NM_010128	ENSMUSG00000030208	Emp1	I-8-09|TMP	epithelial membrane protein 1	protein-coding
unique_peak2-37518-10-13--0.450939577048835-0.386243247519795	chr5	21175197	21175668	+	0	NA	intron (NM_178728, intron 4 of 4)	intron (NM_178728, intron 4 of 4)	23630	NM_026034	67211	Mm.260782	NM_026034	ENSMUSG00000038525	Armc10	2810037C14Rik|Svh	armadillo repeat containing 10	protein-coding
common_peak2-24408-3-12--2.11442280810037-2.15846853396659	chr17	15084640	15085161	+	0	NA	non-coding (NR_027905, exon 1 of 1)	non-coding (NR_027905, exon 1 of 1)	928	NR_027905	106740	Mm.475379	NR_027905		LOC106740	-	uncharacterized LOC106740	ncRNA
unique_peak2-33369-2-8--2.08737925770563-1.65811743852845	chr11	35838423	35838866	+	0	NA	intron (NM_001290702, intron 25 of 27)	(TTCC)n|Simple_repeat|Simple_repeat	-45053	NM_170779	211652	Mm.31267	NM_170779		Wwc1	AA408228|AU017197|BC037006|Kibra|mKIAA0869	WW, C2 and coiled-coil domain containing 1	protein-coding
common_peak1-15219-17-23--0.366666162516118-0.383878263347744	chr4	136462328	136463038	+	0	NA	Intergenic	Intergenic	-7924	NM_007572	12259	Mm.439957	NM_007572	ENSMUSG00000036887	C1qa	AI255395|C1q	complement component 1, q subcomponent, alpha polypeptide	protein-coding
common_peak1-14741-300-344-0.717405817056166-12.2758132600337	chr3	87149241	87153054	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-10656	NM_009690	11801	Mm.6676	NM_009690	ENSMUSG00000015854	Cd5l	1/6|AAC-11|AI047839|Api6|CT2|Pdp|Sp-alpha	CD5 antigen-like	protein-coding
common_peak1-12245-15-12-0.311725032414564-0.425539671739611	chr17	35779383	35780231	+	0	NA	intron (NM_001033366, intron 1 of 2)	B1_Mus1|SINE|Alu	833	NM_001033366	268949	Mm.296301	NM_001033366	ENSMUSG00000073408	Dpcr1	Gm630	diffuse panbronchiolitis critical region 1 (human)	protein-coding
common_peak2-31182-17-20--0.174021084573723-0.306598483909156	chr8	47675343	47675890	+	0	NA	exon (NM_001001184, exon 9 of 15)	exon (NM_001001184, exon 9 of 15)	26938	NM_001001184	408022	Mm.217385	NM_001001184	ENSMUSG00000038225	Primpol	BC065112|Ccdc111	primase and polymerase (DNA-directed)	protein-coding
unique_peak1-3297-10-1-2.35641534500877-2.57096726280955	chr18	75440605	75441119	+	0	NA	intron (NM_027727, intron 16 of 16)	(TG)n|Simple_repeat|Simple_repeat	16109	NR_045394	100503117	Mm.250517	NR_045393		2010010A06Rik	5033420E22Rik	RIKEN cDNA 2010010A06 gene	ncRNA
common_peak1-17680-13-8-0.608547029195456-0.660903317613904	chr7	66450585	66451199	+	0	NA	Intergenic	Lx8|LINE|L1	-33228	NM_173010	22215	Mm.9002	NM_011668	ENSMUSG00000025326	Ube3a	4732496B02|5830462N02Rik|A130086L21Rik|Hpve6a|mKIAA4216	ubiquitin protein ligase E3A	protein-coding
common_peak1-8433-29-44--0.379563015714564-0.524158758825513	chr10	77605729	77606803	+	0	NA	Intergenic	Lx9|LINE|L1	26247	NM_138601	28295	Mm.268691	NM_138601	ENSMUSG00000053329	D10Jhu81e	C21orf33|ES1	DNA segment, Chr 10, Johns Hopkins University 81 expressed	protein-coding
common_peak1-8140-11-26--1.24619391791185-1.66030262873422	chr1	191025615	191026198	+	0	NA	Intergenic	Intergenic	141326	NM_001159850	16526	Mm.33304	NM_010607	ENSMUSG00000037624	Kcnk2	A430027H14Rik|AI848635|TREK-1	potassium channel, subfamily K, member 2	protein-coding
common_peak1-18390-9-16--0.897849434846119-0.732381977911291	chr8	71371306	71371881	+	0	NA	Intergenic	Intergenic	-32861	NM_008509	16956	Mm.1514	NM_008509	ENSMUSG00000015568	Lpl	-	lipoprotein lipase	protein-coding
common_peak1-12378-26-24-0.284042902383738-0.446094173747083	chr17	65950398	65951193	+	0	NA	intron (NM_013933, intron 1 of 5)	intron (NM_013933, intron 1 of 5)	12100	NM_013933	30960	Mm.266767	NM_013933	ENSMUSG00000024091	Vapa	33kDa|VAP33	vesicle-associated membrane protein, associated protein A	protein-coding
unique_peak1-3148-8-2-1.42025991722641-1.65811743852845	chr18	36671265	36671670	+	0	NA	intron (NM_010415, intron 3 of 5)	intron (NM_010415, intron 3 of 5)	3992	NM_010415	15200	Mm.289681	NM_010415	ENSMUSG00000024486	Hbegf	AW047313|Dtr|Dts|Hegfl	heparin-binding EGF-like growth factor	protein-coding
common_peak1-10523-20-19-0.16614668970383-0.348739088570342	chr14	8172356	8173077	+	0	NA	Intergenic	Intergenic	-7807	NM_001025085	545013	Mm.422841	NM_001025085	ENSMUSG00000072726	Gm5797	EG545013	predicted gene 5797	protein-coding
common_peak1-8662-8-10--0.454209200689727-1.078512453669	chr10	128203596	128204123	+	0	NA	TTS (NM_001170869)	TTS (NM_001170869)	18348	NM_001253704	78428	Mm.27358	NM_030100	ENSMUSG00000064030	Wibg	A030010B05Rik|Pym	within bgcn homolog (Drosophila)	protein-coding
unique_peak2-35015-4-10--1.48289213249054-1.5150158574804	chr15	101984087	101984434	+	0	NA	intron (NM_146064, intron 3 of 14)	intron (NM_146064, intron 3 of 14)	3254	NM_146064	223920	Mm.358862	NM_146064	ENSMUSG00000023045	Soat2	ACAT2|D15Wsu97e	sterol O-acyltransferase 2	protein-coding
common_peak2-30902-17-8-1.04837133676273-1.30305656033811	chr7	142481564	142481991	+	0	NA	Intergenic	Lx4A|LINE|L1	21475	NM_001163611	100043254	Mm.192092	NM_001163611	ENSMUSG00000073804	Nps	ENSMUSG00000073804	neuropeptide S	protein-coding
common_peak2-19900-83-101-0.241797283134631-0.69281726536346	chr1	106795973	106796834	+	0	NA	intron (NM_011800, intron 1 of 11)	intron (NM_011800, intron 1 of 11)	131007	NM_011800	23836	Mm.103640	NM_011800	ENSMUSG00000050840	Cdh20	Cdh7	cadherin 20	protein-coding
common_peak1-14486-74-116--0.154478142604797-0.419969705660413	chr3	5575278	5576908	+	0	NA	5' UTR (NM_008994, exon 1 of 6)	5' UTR (NM_008994, exon 1 of 6)	155	NM_001163301	19302	Mm.132336	NM_008994	ENSMUSG00000040374	Pex2	D3Ertd138e|PAF-1|PMP35|Pxmp3	peroxisomal biogenesis factor 2	protein-coding
common_peak1-19209-18-18-0.0649916377847664-0.323898164595606	chr9	105130979	105131983	+	0	NA	intron (NM_172461, intron 13 of 15)	Lx|LINE|L1	-84069	NM_028562	73532	Mm.23516	NM_028562	ENSMUSG00000032566	1700080E11Rik	AI429110|Tseg8	RIKEN cDNA 1700080E11 gene	protein-coding
common_peak1-18148-30-22-0.64611345343486-1.04213512323541	chr8	11339552	11340590	+	0	NA	intron (NM_009932, intron 3 of 47)	intron (NM_009932, intron 3 of 47)	27242	NM_009932	12827	Mm.181021	NM_009932	ENSMUSG00000031503	Col4a2	Col4a-2	collagen, type IV, alpha 2	protein-coding
common_peak1-18807-25-39--0.460078189542257-0.621525249893804	chr9	75775880	75776767	+	0	NA	Intergenic	Intergenic	-86461	NM_173731	208982	Mm.82306	NM_173731	ENSMUSG00000007908	Hmgcll1	BC037381	3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1	protein-coding
common_peak2-30075-13-14--0.12841856497075-0.301029995663977	chr6	131418368	131418905	+	0	NA	Intergenic	Lx3A|LINE|L1	-75144	NM_001244628	71392	Mm.22800	NM_001244628	ENSMUSG00000094113	5430401F13Rik	-	RIKEN cDNA 5430401F13 gene	protein-coding
common_peak1-12559-11-7-0.508693584251613-1.21681515183528	chr18	9300535	9301096	+	0	NA	Intergenic	RodERV21-int|LTR|ERV1	-18008	NM_153086	225152	Mm.119273	NM_153086	ENSMUSG00000036855	Gjd4	9430022F06Rik|Cx39	gap junction protein, delta 4	protein-coding
unique_peak1-4469-10-3-1.35641534500877-1.75805390616669	chr2	180286545	180287033	+	0	NA	Intergenic	Intergenic	-29220	NM_028479	73247	Mm.426558	NM_028479	ENSMUSG00000027569	Mrgbp	1600027N09Rik|AW060503|C80444	MRG/MORF4L binding protein	protein-coding
common_peak2-30058-48-101--0.701498190736681-2.23047157235694	chr6	128362012	128363440	+	0	NA	exon (NM_133927, exon 9 of 12)	exon (NM_133927, exon 9 of 12)	12202	NM_133927	101142	Mm.31345	NM_133927	ENSMUSG00000001518	Itfg2	2700050P07Rik|AI646725	integrin alpha FG-GAP repeat containing 2	protein-coding
unique_peak1-3029-15-4-1.69023665566829-1.97518968347063	chr18	56688213	56688986	+	0	NA	intron (NM_138600, intron 16 of 17)	B1_Mur4|SINE|Alu	-9194	NR_106160	102465790		NR_106160	miRBase:MI0025040	Mir1258	mmu-mir-1258	microRNA mir-1258	ncRNA
common_peak1-7592-9-10--0.269818212233077-1.05503135781948	chr1	55088384	55088985	+	0	NA	Intergenic	Intergenic	-4362	NM_031179	81898	Mm.279736	NM_031179	ENSMUSG00000025982	Sf3b1	155kDa|2810001M05Rik|AA409119|Prp10|SAP155|SF3b155|TA-8|Targ4	splicing factor 3b, subunit 1	protein-coding
common_peak1-16287-11-10-0.0492619656143161-0.31137425193576	chr5	111248076	111248551	+	0	NA	Intergenic	(TTAGGG)n|Simple_repeat|Simple_repeat	-9213	NM_009469	22241	Mm.271898	NM_009469	ENSMUSG00000029512	Ulk1	AU041434|Unc51.1|mKIAA0722	unc-51 like kinase 1	protein-coding
common_peak1-12616-18-21--0.146512467408946-0.306326795069975	chr18	32036427	32037340	+	0	NA	intron (NM_028866, intron 7 of 21)	intron (NM_028866, intron 7 of 21)	34674	NM_026006	67158	Mm.31537	NM_026006	ENSMUSG00000044982	Sft2d3	2610206C24Rik|AI847965|AW046173	SFT2 domain containing 3	protein-coding
common_peak2-32115-17-51--1.48214337993605-3.59866429024318	chr9	101250717	101251936	+	0	NA	TTS (NR_110509)	TTS (NR_110509)	6802	NR_110509	102633035	Mm.411422	NR_110509		LOC102633035	-	uncharacterized LOC102633035	ncRNA
unique_peak1-255-10-1-2.35641534500877-2.57096726280955	chr1	91693434	91693922	+	0	NA	intron (NM_001037136, intron 12 of 16)	intron (NM_001037136, intron 12 of 16)	-113211	NR_015540	74403	Mm.444291	NR_015540		4933400F21Rik	1700091C04Rik|4930565K10Rik	RIKEN cDNA 4933400F21 gene	ncRNA
unique_peak2-33151-4-9--1.34538860874061-1.36011389749466	chr10	86779090	86779599	+	0	NA	Intergenic	Intergenic	177061	NM_008553	17172	Mm.136217	NM_008553	ENSMUSG00000020052	Ascl1	AI225900|ASH1|Mash1|bHLHa46	achaete-scute complex homolog 1 (Drosophila)	protein-coding
common_peak1-17410-12-11-0.0638134843664826-0.337263207250336	chr7	4866270	4866824	+	0	NA	promoter-TSS (NM_170759)	promoter-TSS (NM_170759)	-272	NM_170759	232816	Mm.27442	NM_170759	ENSMUSG00000074406	Zfp628	Zec|Znf628	zinc finger protein 628	protein-coding
unique_peak2-38578-6-4-0.24347001549294-0.989110657569874	chr7	66658676	66659072	+	0	NA	Intergenic	L1Md_T|LINE|L1	-79355	NR_015479	330544	Mm.9002	NR_015479		C230091D08Rik	-	RIKEN cDNA C230091D08 gene	ncRNA
common_peak2-28095-23-16-0.634304663258741-0.82304638657543	chr4	86690323	86691165	+	0	NA	intron (NM_001110240, intron 4 of 9)	intron (NM_001110240, intron 4 of 9)	170426	NM_139306	230379	Mm.45019	NM_139306	ENSMUSG00000038007	Acer2	2410116I05Rik|Asah3l|CRG-L1|maCER2	alkaline ceramidase 2	protein-coding
common_peak1-12342-12-40--1.70877601953045-3.43266191012052	chr17	56036012	56036718	+	0	NA	intron (NM_145490, intron 3 of 3)	MurSatRep1|Unknown|Unknown	4849	NM_145490	224893	Mm.294853	NM_145490		Zfp959	-	zinc finger protein 959	protein-coding
common_peak2-31313-88-142--0.144458927607857-0.436498524636116	chr8	79028437	79031156	+	0	NA	Intergenic	RLTR17|LTR|ERVK	394276	NR_028579	100039211	Mm.367571	NR_028579	ENSMUSG00000074235	Gm10649	ENSMUSG00000074235	predicted gene 10649	ncRNA
common_peak2-22228-12-25--1.05166373305345-1.1381569562463	chr13	17694264	17694886	+	0	NA	intron (NM_138654, intron 6 of 13)	MTD|LTR|MaLR	92024	NM_138654	192136	Mm.364180	NM_138654		Sugct	5033411D12Rik|D17907	succinyl-CoA glutarate-CoA transferase	protein-coding
common_peak1-9306-17-7-1.21829633820504-1.55050753388977	chr11	94144530	94145431	+	0	NA	Intergenic	Intergenic	38245	NM_026313	67684	Mm.30927	NM_026313	ENSMUSG00000020863	Luc7l3	3300001P08Rik|Luc7a	LUC7-like 3 (S. cerevisiae)	protein-coding
unique_peak2-33709-9-14--0.717277189204299-0.53895475198017	chr11	110306692	110307136	+	0	NA	intron (NM_011943, intron 1 of 11)	B3|SINE|B2	46478	NM_011943	26399	Mm.14487	NM_011943	ENSMUSG00000020623	Map2k6	MEK6|MKK6|Prkmk6|SAPKK3	mitogen-activated protein kinase kinase 6	protein-coding
unique_peak1-7190-11-2-1.92373108353046-2.32232533660526	chr9	63679285	63679858	+	0	NA	Intergenic	MTD|LTR|MaLR	-73770	NM_016769	17127	Mm.7320	NM_016769	ENSMUSG00000032402	Smad3	AU022421|Madh3	SMAD family member 3	protein-coding
unique_peak1-5450-10-5-0.771452844287613-1.33892459842472	chr5	120228692	120229276	+	0	NA	Intergenic	Intergenic	-55688	NM_011537	21388	Mm.103636	NM_011537	ENSMUSG00000018263	Tbx5	-	T-box 5	protein-coding
unique_peak2-34019-5-7--0.704380336005853-1.01466476204226	chr12	105032720	105033160	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-21097	NM_009246	20703	Mm.439695	NM_009246	ENSMUSG00000071177	Serpina1d	AI118301|Dom4|PI4|Spi1-4	serine (or cysteine) peptidase inhibitor, clade A, member 1D	protein-coding
common_peak2-26432-20-15-0.488074784591193-0.590343908676236	chr2	65226214	65226960	+	0	NA	Intergenic	Intergenic	-24130	NR_105755	102466151		NR_105755	miRBase:MI0021865	Mir6337	mmu-mir-6337	microRNA mir-6337	ncRNA
common_peak1-17643-26-51--0.77254062598263-1.49688973786043	chr7	51861484	51862338	+	0	NA	intron (NM_001271538, intron 40 of 40)	intron (NM_001271538, intron 40 of 40)	15655	NM_001290682	16504	Mm.40312	NM_008422	ENSMUSG00000062785	Kcnc3	KShIIID|Kcr2-3|Kv3.3	potassium voltage gated channel, Shaw-related subfamily, member 3	protein-coding
unique_peak1-138-16-6-1.31090872021046-1.49151883326344	chr1	69276719	69277554	+	0	NA	Intergenic	Intergenic	-122503	NM_010154	13869	Mm.442420	NM_010154	ENSMUSG00000062209	Erbb4	Her4|c-erbB-4	v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	protein-coding
common_peak2-31898-24-21-0.333778284130419-0.518921928796332	chr9	57537078	57537862	+	0	NA	intron (NM_009992, intron 1 of 6)	intron (NM_009992, intron 1 of 6)	1735	NM_009992	13076	Mm.14089	NM_009992	ENSMUSG00000032315	Cyp1a1	AHH|AHRR|CP11|Cyp1a2|P450-1	cytochrome P450, family 1, subfamily a, polypeptide 1	protein-coding
unique_peak1-333-9-5-0.604650905683064-1.21398586181642	chr1	133246018	133246471	+	0	NA	exon (NM_001081011, exon 8 of 23)	exon (NM_001081011, exon 8 of 23)	-70104	NM_019777	56489	Mm.386783	NM_019777	ENSMUSG00000042349	Ikbke	AW558201|IKK-i|IKKepsilon|Ikki	inhibitor of kappaB kinase epsilon	protein-coding
common_peak2-25519-17-22--0.305265617851975-0.348739088570342	chr19	5749558	5750399	+	0	NA	intron (NM_008520, intron 12 of 27)	intron (NM_008520, intron 12 of 27)	9074	NM_008520	16998	Mm.182396	NM_008520	ENSMUSG00000024940	Ltbp3	Ltbp2|mFLJ00070	latent transforming growth factor beta binding protein 3	protein-coding
common_peak1-17792-24-29--0.113680692840802-0.304839791830752	chr7	98656695	98657656	+	0	NA	intron (NM_011807, intron 2 of 22)	intron (NM_011807, intron 2 of 22)	417879	NM_011807	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
common_peak1-16890-10-15--0.643584654991231-0.519648556297791	chr6	71966013	71966551	+	0	NA	intron (NR_046180, intron 2 of 2)	RSINE1|SINE|B4	26240	NR_046180	330350	Mm.246787	NR_046180		9130221F21Rik	9130221F21	RIKEN cDNA 9130221F21 gene	ncRNA
common_peak2-23626-12-10-0.189344366450341-0.386243247519795	chr15	83223377	83223851	+	0	NA	intron (NM_001159509, intron 2 of 10)	intron (NM_001159509, intron 2 of 10)	-25887	NR_027980	69291	Mm.66794	NM_001033147		1700001L05Rik	-	RIKEN cDNA 1700001L05 gene	ncRNA
unique_peak1-6032-8-1-2.00522241794757-2.05605744720049	chr6	114381381	114381894	+	0	NA	intron (NM_008285, intron 2 of 2)	intron (NM_008285, intron 2 of 2)	27977	NM_001252643	15465	Mm.333327	NM_008285	ENSMUSG00000053004	Hrh1	Bphs|H1R|HH1R|Hir	histamine receptor H1	protein-coding
common_peak2-27250-66-82-0.143444233078917-0.425896051280204	chr3	53462678	53464211	+	0	NA	Intergenic	Intergenic	-2167	NM_172862	242022	Mm.38378	NM_172862	ENSMUSG00000037016	Frem2	6030440P17Rik|8430406N05Rik|Gm409|b2b1562Clo|my|ne|nv1	Fras1 related extracellular matrix protein 2	protein-coding
unique_peak2-38848-3-13--2.22133801201688-2.36932189928148	chr7	143822306	143822807	+	0	NA	Intergenic	Intergenic	79731	NR_046021	621677	Mm.207290	NR_046021		Gm6249	EG621677	predicted gene 6249	ncRNA
common_peak1-9776-24-41--0.599107520011044-0.83607543869935	chr12	56520925	56521656	+	0	NA	Intergenic	Intergenic	21478	NM_011968	26443	Mm.30210	NM_011968	ENSMUSG00000021024	Psma6	IOTA	proteasome (prosome, macropain) subunit, alpha type 6	protein-coding
common_peak1-8231-10-4-1.03448725012141-1.5150158574804	chr10	12919130	12919622	+	0	NA	Intergenic	Intergenic	-6433	NM_181470	353258	Mm.117581	NM_181470	ENSMUSG00000019814	Ltv1	2610020N02Rik	LTV1 homolog (S. cerevisiae)	protein-coding
common_peak1-14793-19-20-0.0103699038829257-0.306326795069978	chr3	89896653	89897686	+	0	NA	intron (NM_001271764, intron 8 of 8)	B2_Mm1a|SINE|B2	-10885	NM_029937	77595	Mm.159949	NM_029937	ENSMUSG00000027939	Nup210l	4930548O11Rik|R26-EGFP|Tg(Gt(ROSA)26Sor-EGFP)130910Eps	nucleoporin 210-like	protein-coding
unique_peak2-33419-3-6--1.22133801201688-1.08602067057793	chr11	59707768	59708193	+	0	NA	Intergenic	Intergenic	46405	NM_134029	103850	Mm.41761	NM_134029	ENSMUSG00000032615	Nt5m	2010013E09Rik|AI846937|dNT-2	5',3'-nucleotidase, mitochondrial	protein-coding
common_peak2-27013-17-19--0.103631756682325-0.301029995663974	chr2	173262932	173263586	+	0	NA	Intergenic	B3|SINE|B2	-84834	NM_028158	72221	Mm.46132	NM_028158	ENSMUSG00000027518	1700021F07Rik	-	RIKEN cDNA 1700021F07 gene	protein-coding
common_peak2-26550-36-55--0.328033835889849-0.518540604135986	chr2	94157316	94157972	+	0	NA	intron (NM_183106, intron 22 of 24)	L1MEg|LINE|L1	-56088	NR_030431	735259		NR_030431	miRBase:MI0004295	Mir670	Mirn670|mmu-mir-670	microRNA 670	ncRNA
common_peak2-25195-66-56-0.6855936502611-2.22174510361786	chr18	60500734	60502201	+	0	NA	Intergenic	L1Md_F3|LINE|L1	-34216	NM_021792	60440	Mm.261140	NM_021792	ENSMUSG00000054072	Iigp1	2900074L10Rik|AI046432|AW111922|Ifgga1|Iigp|Irga6	interferon inducible GTPase 1	protein-coding
unique_peak1-6351-32-2-3.6941295184985-9.17270135773948	chr7	63815960	63817349	+	0	NA	Intergenic	Intergenic	321513	NM_021879	18431	Mm.137052	NM_021879	ENSMUSG00000030450	Oca2	D7H15S12|D7Icr28RN|D7Nic1|p	oculocutaneous albinism II	protein-coding
unique_peak1-3936-8-4-0.683294323060208-1.21878474469819	chr2	27670611	27671019	+	0	NA	Intergenic	Intergenic	-71130	NM_015734	12831	Mm.7281	NM_015734	ENSMUSG00000026837	Col5a1	AI413331	collagen, type V, alpha 1	protein-coding
common_peak2-26523-8-7-0.00522241794757061-1.00793137938329	chr2	91112785	91113213	+	0	NA	intron (NM_001166024, intron 11 of 16)	intron (NM_001166024, intron 11 of 16)	7727	NM_023854	77038	Mm.43636	NM_023854	ENSMUSG00000027255	Arfgap2	2310032E02Rik|Zfp289	ADP-ribosylation factor GTPase activating protein 2	protein-coding
common_peak2-20372-30-38--0.115726809370376-0.312769113767451	chr10	13982803	13983728	+	0	NA	Intergenic	Intergenic	281577	NM_001002268	215798	Mm.440142	NM_001002268	ENSMUSG00000039116	Gpr126	1190004A11Rik|AI449247|AW045736|DREG|Gm222	G protein-coupled receptor 126	protein-coding
unique_peak1-3179-8-3-1.00522241794757-1.39487600375387	chr18	43465487	43466001	+	0	NA	intron (NM_178749, intron 8 of 12)	GA-rich|Low_complexity|Low_complexity	67182	NM_001136086	22240	Mm.8180	NM_009468	ENSMUSG00000024501	Dpysl3	CRMP-4|DRP-3|TUC4|ULIP-1|Ulip|Ulip1	dihydropyrimidinase-like 3	protein-coding
common_peak2-32378-15-37--1.23576276288793-2.15838218998677	chrX	107815722	107816399	+	0	NA	Intergenic	MTD-int|LTR|MaLR	-193744	NM_008901	18994	Mm.56946	NM_008901	ENSMUSG00000056854	Pou3f4	Brn-4|Brn4|OTF-9|Otf9|Slf|oct-9	POU domain, class 3, transcription factor 4	protein-coding
common_peak1-11575-10-10--0.103016273628528-0.301029995663987	chr16	13819282	13819815	+	0	NA	intron (NM_010946, intron 1 of 9)	CpG	178	NM_010946	18203	Mm.380410	NM_010946	ENSMUSG00000022681	Ntan1	-	N-terminal Asn amidase	protein-coding
unique_peak2-38389-10-15--0.643584654991231-0.519648556297791	chr7	19002413	19003106	+	0	NA	Intergenic	L1_Mus2|LINE|L1	14645	NM_054063	114871	Mm.362025	NM_054063	ENSMUSG00000030373	Psg28	cea16	pregnancy-specific glycoprotein 28	protein-coding
common_peak1-7487-12-10-0.189344366450341-0.386243247519795	chr1	7396950	7397598	+	0	NA	Intergenic	Intergenic	318273	NM_183028	319263	Mm.21539	NM_183028	ENSMUSG00000051285	Pcmtd1	8430411F12Rik|A030012M09Rik	protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	protein-coding
common_peak2-31360-19-30--0.551508983725189-0.647723624534446	chr8	84752655	84753493	+	0	NA	Intergenic	Intergenic	173411	NM_001254747	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak2-20892-9-22--1.33394854965279-1.52222891542741	chr11	3905055	3905995	+	0	NA	Intergenic	Intergenic	15589	NM_001177691	53897	Mm.103414	NM_016922	ENSMUSG00000049721	Gal3st1	Cst|Gcst	galactose-3-O-sulfotransferase 1	protein-coding
common_peak2-25193-9-11--0.395349094316936-0.344532117358383	chr18	57837151	57837696	+	0	NA	intron (NM_029290, intron 6 of 6)	intron (NM_029290, intron 6 of 6)	-39184	NR_045360	70157	Mm.490532	NR_045360		2210409D07Rik	-	RIKEN cDNA 2210409D07 gene	ncRNA
common_peak2-27581-54-96--0.426827080557394-1.04808805211778	chr3	101109398	101110833	+	0	NA	Intergenic	Intergenic	-18253	NM_013486	12481	Mm.22842	NM_013486	ENSMUSG00000027863	Cd2	LFA-2|Ly-37|Ly37	CD2 antigen	protein-coding
common_peak1-7557-23-19-0.399839409621718-0.538442145997695	chr1	39576484	39577575	+	0	NA	Intergenic	Intergenic	-15618	NM_028043	52846	Mm.259421	NM_028043	ENSMUSG00000003135	Cnot11	2410015L18Rik|C40|D1Bwg0212e	CCR4-NOT transcription complex, subunit 11	protein-coding
unique_peak1-6861-8-1-2.00522241794757-2.05605744720049	chr8	87069206	87069730	+	0	NA	intron (NM_007578, intron 11 of 46)	intron (NM_007578, intron 11 of 46)	117283	NM_010499	15936	Mm.399	NM_010499	ENSMUSG00000053560	Ier2	AI317238|Ch1|Pip92	immediate early response 2	protein-coding
common_peak2-20571-10-22--1.16714661104824-1.30248952876293	chr10	76442114	76442791	+	0	NA	Intergenic	GA-rich|Low_complexity|Low_complexity	-17760	NM_021568	59093	Mm.272803	NM_021568	ENSMUSG00000001120	Pcbp3	AlphaCP-3	poly(rC) binding protein 3	protein-coding
common_peak1-10789-24-21-0.333778284130419-0.518921928796332	chr14	76110263	76111260	+	0	NA	intron (NM_177381, intron 20 of 22)	intron (NM_177381, intron 20 of 22)	43539	NM_177381	338337	Mm.86507	NM_177381	ENSMUSG00000034893	Cog3	E430004N23	component of oligomeric golgi complex 3	protein-coding
common_peak2-22764-14-16--0.188246680892695-0.308035960714963	chr13	119462266	119462818	+	0	NA	Intergenic	Intergenic	-40964	NM_008002	14165	Mm.317323	NM_008002	ENSMUSG00000021732	Fgf10	AEY17|BB213776|Fgf-10|Gsfaey17	fibroblast growth factor 10	protein-coding
unique_peak1-5150-9-5-0.604650905683064-1.21398586181642	chr5	17530298	17530856	+	0	NA	Intergenic	Intergenic	62189	NM_001081143	242851	Mm.332230	NM_001081143	ENSMUSG00000028777	Gnat3	Ggust|Gtn	guanine nucleotide binding protein, alpha transducing 3	protein-coding
unique_peak1-3325-7-3-0.799090830298189-1.23214870625617	chr18	82879109	82879628	+	0	NA	Intergenic	Intergenic	-10305	NR_039572	100628586		NR_039572	miRBase:MI0018021	Mir5112	mmu-mir-5112|mu-mir-5112	microRNA 5112	ncRNA
common_peak2-31661-24-14-0.886319307159198-1.33403699391683	chr8	126613293	126614087	+	0	NA	Intergenic	Intergenic	66317	NM_001029876	382038	Mm.334891	NM_001029876	ENSMUSG00000031976	Urb2	C77575|mKIAA0133	URB2 ribosome biogenesis 2 homolog (S. cerevisiae)	protein-coding
common_peak1-10966-22-22-0.123722149030391-0.342639663781856	chr15	27629859	27630745	+	0	NA	Intergenic	RLTR13D4|LTR|ERVK	-19005	NM_001242423	223433	Mm.266485	NM_198301	ENSMUSG00000056069	Fam105a	9830126M18	family with sequence similarity 105, member A	protein-coding
common_peak2-29541-33-26-0.576450060362061-0.950816664083185	chr6	39117796	39118549	+	0	NA	intron (NM_001033430, intron 7 of 19)	L1MB7|LINE|L1	38600	NM_001033430	338523	Mm.293175	NM_001033430	ENSMUSG00000042599	Kdm7a	A630082K20Rik|BB041802|ENSMUSG00000073143|Jhdm1d|mKIAA1718	lysine (K)-specific demethylase 7A	protein-coding
unique_peak1-5386-17-5-1.63333383748388-2.19184853030482	chr5	100605668	100606418	+	0	NA	Intergenic	Intergenic	-17216	NM_182841	231503	Mm.99790	NM_182841	ENSMUSG00000050640	Tmem150c	-	transmembrane protein 150C	protein-coding
common_peak1-8801-8-19--1.31670567693979-1.30305656033811	chr11	20477263	20477752	+	0	NA	intron (NM_021372, intron 1 of 1)	intron (NM_021372, intron 1 of 1)	34251	NM_021372	58172	Mm.339676	NM_021372	ENSMUSG00000049800	Sertad2	AB041541|AU021878|Kiaa0127|SEI-2|Sei2|TRIP-Br2|mKIAA0127	SERTA domain containing 2	protein-coding
common_peak1-13841-218-270-0.509111445729339-4.77870444702685	chr2	60123947	60126094	+	0	NA	Intergenic	Intergenic	-2479	NM_001290660	66205	Mm.227281	NM_025422	ENSMUSG00000060703	Cd302	1110055L24Rik|AI159627	CD302 antigen	protein-coding
common_peak1-12773-9-6-0.382258484346616-1.11707584880836	chr18	61211004	61211519	+	0	NA	intron (NM_001146268, intron 1 of 22)	intron (NM_001146268, intron 1 of 22)	6457	NM_008809	18596	Mm.4146	NM_008809	ENSMUSG00000024620	Pdgfrb	AI528809|CD140b|PDGFR-1|Pdgfr	platelet derived growth factor receptor, beta polypeptide	protein-coding
unique_peak2-37395-6-8--0.60452689106201-1.03789460276074	chr4	141279805	141280237	+	0	NA	promoter-TSS (NM_001017966)	promoter-TSS (NM_001017966)	-687	NM_001017966	68817	Mm.393721	NM_001017966		Ddi2	1110056G13Rik|1700027M01Rik|9130022E05Rik|AI604911|AU040698	DNA-damage inducible protein 2	protein-coding
unique_peak1-5802-8-3-1.00522241794757-1.39487600375387	chr6	66964874	66965378	+	0	NA	intron (NM_001177560, intron 3 of 4)	intron (NM_001177560, intron 3 of 4)	-21467	NR_040278	320172	Mm.449039	NR_040278	ENSMUSG00000087231	E230016M11Rik	-	RIKEN cDNA E230016M11 gene	ncRNA
common_peak2-29939-29-36--0.0971632850138393-0.304088508634286	chr6	116107259	116107999	+	0	NA	intron (NM_177412, intron 1 of 5)	Lx3C|LINE|L1	35763	NM_177412	330401	Mm.425352	NM_177412	ENSMUSG00000030126	Tmcc1	3632431M01Rik|mKIAA0779	transmembrane and coiled coil domains 1	protein-coding
unique_peak1-5130-6-4-0.24347001549294-0.989110657569874	chr5	3538211	3538722	+	0	NA	Intergenic	(GGAGA)n|Simple_repeat|Simple_repeat	-5367	NM_001042501	68152	Mm.240265	NM_026583		Fam133b	2900022K02Rik|5830415L20Rik	family with sequence similarity 133, member B	protein-coding
unique_peak2-35654-8-27--1.80213250411003-2.66623981987189	chr18	4352932	4353731	+	0	NA	promoter-TSS (NM_007746)	promoter-TSS (NM_007746)	-214	NR_040328	73915	Mm.482777	NR_040328		4833419F23Rik	-	RIKEN cDNA 4833419F23 gene	ncRNA
common_peak2-26946-38-45-0.0478907032415172-0.322047890816902	chr2	164549545	164550995	+	0	NA	Intergenic	Intergenic	9465	NM_001040055	641368	Mm.422380	NM_001040055	ENSMUSG00000074593	Spint5	Gm14316|OTTMUSG00000016293	serine protease inhibitor, Kunitz type 5	protein-coding
unique_peak2-35165-8-58--2.87742063141427-9.58265348630933	chr16	34572858	34574432	+	0	NA	Intergenic	Intergenic	-59532	NM_177357	545156	Mm.82274	NM_177357	ENSMUSG00000061751	Kalrn	2210407G14Rik|AV235988|DUET|E530005C20Rik|Gm539|Hapip|TRAD	kalirin, RhoGEF kinase	protein-coding
common_peak2-26873-26-16-0.840436250908123-1.24110690293937	chr2	156277901	156278541	+	0	NA	intron (NM_001291121, intron 2 of 21)	intron (NM_001291121, intron 2 of 21)	-23049	NM_001006664	13821	Mm.20852	NM_013510	ENSMUSG00000027624	Epb4.1l1	4.1N|Epb41l1|NBL1|mKIAA0338	erythrocyte protein band 4.1-like 1	protein-coding
common_peak2-21851-18-17-0.142994149786039-0.353907621462753	chr11	121673397	121673987	+	0	NA	Intergenic	Intergenic	-17840	NM_029049	74675	Mm.61213	NM_029049	ENSMUSG00000039198	Ptchd3	4930451E13Rik|4933440L20Rik|RNDEu-3	patched domain containing 3	protein-coding
common_peak1-11714-14-12-0.198776442216552-0.373562084705529	chr16	32608841	32609486	+	0	NA	intron (NM_011638, intron 1 of 18)	CpG	181	NM_011638	22042	Mm.28683	NM_011638	ENSMUSG00000022797	Tfrc	2610028K12Rik|AI195355|AI426448|AU015758|CD71|E430033M20Rik|Mtvr-1|Mtvr1|TFR|TFR1|TR|Trfr|p90	transferrin receptor	protein-coding
common_peak1-18913-61-27-1.57539440769174-6.79143745080396	chr9	43324937	43327101	+	0	NA	Intergenic	Intergenic	207173	NM_023655	72169	Mm.273277	NM_023655	ENSMUSG00000032013	Trim29	1110047J21Rik|2810431N19Rik|4732461M22Rik|AI119726	tripartite motif-containing 29	protein-coding
common_peak2-29023-28-22-0.529397163764449-0.781990829058356	chr5	113157762	113158507	+	0	NA	intron (NM_028901, intron 39 of 43)	intron (NM_028901, intron 39 of 43)	-64178	NR_040675	67360	Mm.59218	NR_040675	ENSMUSG00000098230	1700095B10Rik	-	RIKEN cDNA 1700095B10 gene	ncRNA
common_peak1-12747-19-14-0.495796731053168-0.607095980551316	chr18	57744874	57745741	+	0	NA	intron (NM_029290, intron 3 of 6)	intron (NM_029290, intron 3 of 6)	-33256	NR_015494	75084	Mm.243841	NR_015494	ENSMUSG00000086607	4930511M06Rik	-	RIKEN cDNA 4930511M06 gene	ncRNA
common_peak1-19058-32-35-0.109167017777348-0.348003640999429	chr9	67040180	67041702	+	0	NA	Intergenic	B3A|SINE|B2	43592	NR_029576	387185		NR_029576		Mir190a	Mir190|Mirn190|mir-190|mmu-mir-190|mmu-mir-190a	microRNA 190a	ncRNA
unique_peak2-32547-8-10--0.454209200689727-1.078512453669	chr1	72076784	72077347	+	0	NA	Intergenic	Intergenic	-25296	NR_040454	71134	Mm.370574	NR_040454		4933417E11Rik	-	RIKEN cDNA 4933417E11 gene	ncRNA
common_peak2-20910-150-187-0.386000231391452-2.05217576691725	chr11	5098280	5100203	+	0	NA	intron (NM_032396, intron 7 of 8)	intron (NM_032396, intron 7 of 8)	-47016	NM_080595	140703	Mm.840	NM_080595	ENSMUSG00000034164	Emid1	AW122071|CO-5|Emu1	EMI domain containing 1	protein-coding
common_peak1-12370-46-51-0.19755622510771-0.459662873060263	chr17	65642607	65644164	+	0	NA	intron (NM_001289485, intron 14 of 15)	L1Md_T|LINE|L1	246737	NM_001008973	381107	Mm.141275	NM_001008973	ENSMUSG00000045036	Tmem232	E130009J12Rik|Gm940|Tes13-L|Tes13-S	transmembrane protein 232	protein-coding
unique_peak2-34833-4-9--1.34538860874061-1.36011389749466	chr15	75152402	75152884	+	0	NA	Intergenic	RLTR13C1|LTR|ERVK	53792	NM_008530	17071	Mm.377095	NM_008530	ENSMUSG00000022583	Ly6f	-	lymphocyte antigen 6 complex, locus F	protein-coding
unique_peak2-35747-5-5--0.289342836727009-0.909929411522249	chr18	37877896	37878200	+	0	NA	intron (NM_033590, intron 1 of 3)	(CA)n|Simple_repeat|Simple_repeat	-2160	NM_033576	93701	Mm.247203	NM_033576		Pcdhgb4	-	protocadherin gamma subfamily B, 4	protein-coding
common_peak2-25404-112-67-1.34578745906994-10.826518566471	chr19	23134092	23136453	+	0	NA	Intergenic	Intergenic	-80444	NM_010638	16601	Mm.291595	NM_010638	ENSMUSG00000033863	Klf9	2310051E17Rik|AA589643|BTEB-1|Bteb1|ENSMUSG00000055440|Gm9971	Kruppel-like factor 9	protein-coding
common_peak2-27095-53-72--0.0488515464640891-0.302548520215158	chr3	121814314	121815799	+	0	NA	intron (NM_007378, intron 15 of 49)	intron (NM_007378, intron 15 of 49)	67678	NM_007378	11304	Mm.3918	NM_007378	ENSMUSG00000028125	Abca4	AW050280|Abc10|Abcr|D430003I15Rik|RmP	ATP-binding cassette, sub-family A (ABC1), member 4	protein-coding
common_peak1-18956-28-34--0.0763238971235038-0.304271119602326	chr9	51008123	51009174	+	0	NA	Intergenic	Intergenic	-13147	NM_011136	18985	Mm.897	NM_011136	ENSMUSG00000032053	Pou2af1	BOB.1|Bob-1|Bob1|OBF-1|OBF.1|OCA-B|OCAB	POU domain, class 2, associating factor 1	protein-coding
common_peak1-10397-29-22-0.588728124558098-0.950553505527076	chr13	97008294	97009344	+	0	NA	Intergenic	Intergenic	-106287	NM_029210	75209	Mm.40436	NM_029210	ENSMUSG00000051111	Sv2c	4930527L09Rik|AI841971	synaptic vesicle glycoprotein 2c	protein-coding
unique_peak2-39635-5-11--1.28934283672701-1.477227296591	chr9	102994054	102994635	+	0	NA	Intergenic	Intergenic	-20060	NM_173781	270192	Mm.490252	NM_173781	ENSMUSG00000032549	Rab6b	9630015C03|AI844641|C330006L04Rik|D9Bwg0185e	RAB6B, member RAS oncogene family	protein-coding
unique_peak1-7175-8-4-0.683294323060208-1.21878474469819	chr9	62021546	62021966	+	0	NA	Intergenic	MURVY-LTR|LTR|ERV1	-51355	NR_039595	100628602		NR_039595	miRBase:MI0018045	Mir5133	mmu-mir-5133|mu-mir-5133	microRNA 5133	ncRNA
common_peak2-30548-8-6-0.197867495889966-1.03789460276074	chr7	73559151	73559434	+	0	NA	intron (NM_053080, intron 3 of 12)	B4A|SINE|B4	13071	NM_053080	56847	Mm.140988	NM_053080	ENSMUSG00000015134	Aldh1a3	ALDH6|RALDH3|V1	aldehyde dehydrogenase family 1, subfamily A3	protein-coding
common_peak2-30503-6-8--0.60452689106201-1.03789460276074	chr7	64287034	64287420	+	0	NA	intron (NM_008074, intron 3 of 9)	MTD-int|LTR|MaLR	355014	NM_008074	14407	Mm.434343	NM_008074		Gabrg3	B230362M20Rik|Gabrg-3	gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3	protein-coding
unique_peak2-32491-7-6--0.00826409175941478-0.97990265578305	chr1	43466232	43466606	+	0	NA	Intergenic	Intergenic	-36177	NM_010879	17974	Mm.389903	NM_010879	ENSMUSG00000066877	Nck2	4833426I10Rik|Grb4|NCKbeta|Nck-2	non-catalytic region of tyrosine kinase adaptor protein 2	protein-coding
unique_peak1-6687-12-2-2.06381348436648-2.79529063155376	chr8	26812929	26813665	+	0	NA	intron (NM_001081269, intron 18 of 22)	intron (NM_001081269, intron 18 of 22)	-17223	NR_121642	71910	Mm.385055	NM_028000	ENSMUSG00000031570	Ppapdc1b	1810019D05Rik|2310022A04Rik|AW045471|Ppapdc1	phosphatidic acid phosphatase type 2 domain containing 1B	protein-coding
common_peak2-22355-9-7-0.18961340640422-1.05908390183068	chr13	24830785	24831190	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	22819	NM_020567	57441	Mm.12239	NM_020567	ENSMUSG00000006715	Gmnn	AW546347|Gem	geminin	protein-coding
unique_peak1-5195-12-4-1.32684789020028-2.04196296489515	chr5	33023874	33024584	+	0	NA	Intergenic	Intergenic	104046	NM_177298	320951	Mm.273765	NM_177298	ENSMUSG00000023452	Pisd	9030221M09Rik	phosphatidylserine decarboxylase	protein-coding
unique_peak1-2609-10-0-3.35641534500877-3.31132995230379	chr16	33692746	33693270	+	0	NA	intron (NM_175256, intron 1 of 14)	intron (NM_175256, intron 1 of 14)	8456	NM_175256	77446	Mm.245741	NM_172934	ENSMUSG00000075254	Heg1	4632417D23Rik|5530401I02Rik|9530025L16Rik|BC038614|Gm629|OTTMUSG00000027315	HEG homolog 1 (zebrafish)	protein-coding
unique_peak2-38864-5-7--0.704380336005853-1.01466476204226	chr7	145106830	145107295	+	0	NA	Intergenic	MTE2a|LTR|MaLR	477705	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
common_peak2-26032-23-15-0.721767504509081-0.949797625454541	chr19	60889638	60890127	+	0	NA	intron (NM_026437, intron 1 of 8)	B2_Mm2|SINE|B2	2409	NM_001167829	67894	Mm.26148	NM_026437	ENSMUSG00000024993	Fam45a	1810055E12Rik	family with sequence similarity 45, member A	protein-coding
unique_peak1-5348-17-3-2.21829633820504-3.11807310444576	chr5	91609595	91610508	+	0	NA	Intergenic	Lx9|LINE|L1	41410	NM_009704	11839	Mm.8039	NM_009704	ENSMUSG00000029378	Areg	AR|Sdgf	amphiregulin	protein-coding
common_peak2-28043-4-6--0.830815435910851-0.989110657569874	chr4	57812895	57813217	+	0	NA	Intergenic	ID_B1|SINE|B4	-45064	NM_009649	11641	Mm.467752	NM_009649	ENSMUSG00000038729	Akap2	AA959716|AI649048|Akap-2|Akap-kl|B230340M18Rik|Prka2	A kinase (PRKA) anchor protein 2	protein-coding
common_peak2-29136-22-15-0.647284105087405-0.849699271740893	chr5	125071931	125072659	+	0	NA	intron (NM_026486, intron 13 of 17)	B1_Mus1|SINE|Alu	-7338	NM_011596	21871	Mm.1158	NM_011596		Atp6v0a2	8430408C20Rik|AI385560|ATP6a2|AW489264|Atp6n1d|Atp6n2|C76904|ISF|J6B7|SHIF|Stv1|TJ6M|TJ6s|Tj6|V-ATPase 116 kDa|V-ATPase a2	ATPase, H+ transporting, lysosomal V0 subunit A2	protein-coding
common_peak2-26943-15-11-0.4272022498345-0.503257505534083	chr2	164460792	164461388	+	0	NA	intron (NM_001012723, intron 3 of 3)	intron (NM_001012723, intron 3 of 3)	3212	NM_001012723	277345	Mm.247244	NM_001012723	ENSMUSG00000070530	Wfdc16	BC043944|WAP16	WAP four-disulfide core domain 16	protein-coding
common_peak2-25020-40-60--0.271761654811788-0.459662873060288	chr18	24020446	24021246	+	0	NA	intron (NM_001162941, intron 5 of 7)	intron (NM_001162941, intron 5 of 7)	58375	NM_153058	212307	Mm.132237	NM_153058	ENSMUSG00000024277	Mapre2	AI314113|C820009F03Rik|D18Abb1e|EB1|EB2|RP1	microtubule-associated protein, RP/EB family, member 2	protein-coding
common_peak2-21191-19-5-1.81772482594053-2.59995804677862	chr11	60245626	60245965	+	0	NA	intron (NM_025757, intron 2 of 5)	intron (NM_025757, intron 2 of 5)	15148	NM_025757	66771	Mm.29950	NM_025757	ENSMUSG00000018415	Gid4	4933439F18Rik	GID complex subunit 4, VID24 homolog (S. cerevisiae)	protein-coding
common_peak2-27897-19-22--0.120874629395327-0.306080386793804	chr4	145194222	145195087	+	0	NA	Intergenic	Intergenic	-12395	NM_001205101	433801	Mm.276881	NM_001013808		Gm13212	OTTMUSG00000010965	predicted gene 13212	protein-coding
unique_peak2-39211-1-8--2.79698201165906-2.05605744720049	chr8	106606501	106606859	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-18845	NM_009868	12562	Mm.21767	NM_009868	ENSMUSG00000031871	Cdh5	7B4|AA408225|Cd144|VE-Cad|VECD|VEcad|Vec	cadherin 5	protein-coding
common_peak2-22585-15-19--0.309763344331706-0.356936432242222	chr13	67723812	67724614	+	0	NA	intron (NM_183146, intron 3 of 3)	intron (NM_183146, intron 3 of 3)	-13569	NM_001163246	100416706	Mm.478045	NM_001163246	ENSMUSG00000058093	AA987161	AA987127	expressed sequence AA987161	protein-coding
unique_peak2-35225-3-8--1.58390809140159-1.39487600375387	chr16	92236290	92236717	+	0	NA	Intergenic	Intergenic	-56131	NM_134110	246133	Mm.156736	NM_134110	ENSMUSG00000039672	Kcne2	2200002I16Rik|AW048273|MiRP1	potassium voltage-gated channel, Isk-related subfamily, gene 2	protein-coding
common_peak2-30097-70-35-1.45004191493309-7.0482881404752	chr6	135040101	135041100	+	0	NA	Intergenic	RMER17A|LTR|ERVK	24920	NM_181444	232431	Mm.23575	NM_181444	ENSMUSG00000046733	Gprc5a	Rai3|Raig1	G protein-coupled receptor, family C, group 5, member A	protein-coding
common_peak1-10809-21-31--0.430510734733764-0.49501414494053	chr14	79426314	79427293	+	0	NA	intron (NM_027906, intron 20 of 44)	AT_rich|Low_complexity|Low_complexity	177818	NM_173758	219189	Mm.159651	NM_027906	ENSMUSG00000058997	Vwa8	1300010F03Rik|4932416F07Rik|AI957255|Kiaa0564|mKIAA0564	von Willebrand factor A domain containing 8	protein-coding
common_peak1-15879-38-80--0.768397343586094-2.0567716791101	chr5	8421931	8423445	+	0	NA	promoter-TSS (NM_013726)	promoter-TSS (NM_013726)	28	NM_013726	27214	Mm.292470	NM_013726	ENSMUSG00000002297	Dbf4	AA545217|Ask	DBF4 homolog (S. cerevisiae)	protein-coding
unique_peak1-6011-19-7-1.40268732666169-1.89173646618542	chr6	108456112	108457138	+	0	NA	intron (NM_010585, intron 54 of 61)	intron (NM_010585, intron 54 of 61)	16888	NR_106121	102465766		NR_106121		Mir7661	mmu-mir-7661	microRNA mir-7661	ncRNA
unique_peak2-38423-5-10--1.16381195464315-1.33892459842472	chr7	25282051	25282569	+	0	NA	intron (NM_153112, intron 1 of 8)	intron (NM_153112, intron 1 of 8)	-9796	NM_001290461	232969	Mm.181332	NM_146183	ENSMUSG00000064264	Zfp428	2410005H09Rik|AV271806|AW047854|Znf428	zinc finger protein 428	protein-coding
common_peak1-10930-41-87--0.758282913788637-2.23549100446751	chr15	10469650	10470806	+	0	NA	intron (NM_029430, intron 3 of 10)	intron (NM_029430, intron 3 of 10)	18195	NM_029430	75777	Mm.48812	NM_029430	ENSMUSG00000022249	Ttc23l	4930401A09Rik	tetratricopeptide repeat domain 23-like	protein-coding
unique_peak1-3699-11-0-3.50869358425161-3.61235994796777	chr19	43893810	43894322	+	0	NA	intron (NM_013806, intron 19 of 31)	intron (NM_013806, intron 19 of 31)	-19227	NR_033472	100038628	Mm.212585	NR_033472	ENSMUSG00000074828	Gm10768	ENSMUSG00000074828	predicted gene 10768	ncRNA
unique_peak1-1887-12-2-2.06381348436648-2.79529063155376	chr14	63982489	63982930	+	0	NA	Intergenic	Intergenic	53315	NM_007549	12143	Mm.3962	NM_007549	ENSMUSG00000014453	Blk	-	B lymphoid kinase	protein-coding
common_peak1-8874-18-19--0.00900894365901106-0.306598483909153	chr11	43183011	43183846	+	0	NA	Intergenic	MER5A|DNA|MER1_type	4535	NR_029558	387164		NR_029558	miRBase:MI0000170	Mir146	Mirn146|miR-146a|mmu-mir-146	microRNA 146	ncRNA
unique_peak2-35346-7-13--1.00826409175941-0.697979855752659	chr17	24886553	24887168	+	0	NA	Intergenic	RMER13A|LTR|ERVK	-3088	NM_001012402	328779	Mm.328848	NM_001012402	ENSMUSG00000039628	Hs3st6	-	heparan sulfate (glucosamine) 3-O-sulfotransferase 6	protein-coding
common_peak1-15471-15-18--0.235762762887929-0.326591483156968	chr4	107178059	107178889	+	0	NA	intron (NM_147221, intron 2 of 10)	intron (NM_147221, intron 2 of 10)	71150	NM_147221	230587	Mm.331757	NM_147221	ENSMUSG00000034762	Glis1	Gli5|Gli6|GliH1	GLIS family zinc finger 1	protein-coding
unique_peak1-1090-8-0-3.00522241794757-2.70926996097583	chr11	88481530	88482025	+	0	NA	intron (NM_054043, intron 5 of 13)	intron (NM_054043, intron 5 of 13)	97766	NM_054043	76626	Mm.400451	NM_054043	ENSMUSG00000069769	Msi2	1700105C15Rik|AI451722|AI563628|AW489193|Msi2h	musashi RNA-binding protein 2	protein-coding
common_peak2-31758-86-113-0.142745779867612-0.454653431189891	chr9	21024658	21026782	+	0	NA	Intergenic	ID_B1|SINE|B4	18056	NM_016679	50868	Mm.248266	NM_016679	ENSMUSG00000003308	Keap1	INRF2|mKIAA0132	kelch-like ECH-associated protein 1	protein-coding
common_peak1-9636-76-155--0.523457832998967-2.0504136492428	chr12	51690812	51692690	+	0	NA	intron (NM_008858, intron 1 of 18)	Lx|LINE|L1	58459	NM_008858	18760	Mm.133719	NM_008858	ENSMUSG00000002688	Prkd1	PKD|PKD1|Pkcm|Prkcm	protein kinase D1	protein-coding
common_peak1-11752-33-47--0.253624938195627-0.423463616707761	chr16	36874861	36876057	+	0	NA	promoter-TSS (NM_134111)	promoter-TSS (NM_134111)	-547	NM_134111	106389	Mm.432078	NM_134111	ENSMUSG00000022838	Eaf2	AW048865|FESTA-L|FESTA-S|Festa|Traits|U19	ELL associated factor 2	protein-coding
unique_peak1-3115-11-2-1.92373108353046-2.32232533660526	chr18	32389633	32390264	+	0	NA	3' UTR (NM_011946, exon 17 of 17)	3' UTR (NM_011946, exon 17 of 17)	-10037	NM_133658	13872	Mm.282335	NM_133658	ENSMUSG00000024382	Ercc3	BTF2 p89|Ercc-3|XPB	excision repair cross-complementing rodent repair deficiency, complementation group 3	protein-coding
unique_peak2-33859-1-12--3.32749672835784-3.1004765869889	chr12	17873514	17873985	+	0	NA	Intergenic	MERVL-int|LTR|ERVL	176129	NM_016677	53602	Mm.313619	NM_016677	ENSMUSG00000071379	Hpcal1	NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3	hippocalcin-like 1	protein-coding
unique_peak2-32656-7-9--0.522837264589173-1.05908390183068	chr1	133400197	133400698	+	0	NA	intron (NM_001081011, intron 2 of 22)	B4|SINE|B4	23491	NM_001081011	14270	Mm.276259	NM_019520	ENSMUSG00000026425	Srgap2	9930124L22Rik|AI448945|FBP2|Fnbp2|srGAP3	SLIT-ROBO Rho GTPase activating protein 2	protein-coding
common_peak1-11578-16-12-0.417823924126969-0.489164546851866	chr16	14159473	14159986	+	0	NA	promoter-TSS (NM_001081154)	promoter-TSS (NM_001081154)	10	NR_030252	723916		NR_030252	miRBase:MI0003491	Mir484	Mirn484|mmu-mir-484	microRNA 484	ncRNA
unique_peak2-35558-17-30--0.735899972181837-0.841847921495509	chr17	65772081	65773218	+	0	NA	intron (NM_001289485, intron 12 of 15)	intron (NM_001289485, intron 12 of 15)	117473	NM_001008973	381107	Mm.141275	NM_001008973	ENSMUSG00000045036	Tmem232	E130009J12Rik|Gm940|Tes13-L|Tes13-S	transmembrane protein 232	protein-coding
common_peak2-30577-14-13-0.0918612383000403-0.332077462497413	chr7	80114638	80115206	+	0	NA	Intergenic	ORR1B2|LTR|MaLR	132032	NR_046024	625243	Mm.261798	NR_046024		Gm6567	-	predicted gene 6567	ncRNA
common_peak1-14013-60-111--0.453063060437072-1.25084506109572	chr2	109890368	109891611	+	0	NA	promoter-TSS (NR_040508)	promoter-TSS (NR_040508)	-353	NR_040508	75517	Mm.363927	NR_040508	ENSMUSG00000086186	Ccdc34os	1700024P03Rik	coiled-coil domain containing 34, opposite strand	ncRNA
common_peak2-27020-25-38--0.423552313517143-0.564346534703877	chr2	173659764	173660530	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	97075	NM_019806	56491	Mm.260456	NM_019806	ENSMUSG00000054455	Vapb	AI225786|AI840687|AI848259|D2Abb2e|R75548|VAP33b|Vamp33b	vesicle-associated membrane protein, associated protein B and C	protein-coding
common_peak1-14098-10-9-0.0344872501214071-1.05503135781948	chr2	125246967	125247674	+	0	NA	intron (NM_007993, intron 6 of 65)	intron (NM_007993, intron 6 of 65)	84854	NM_007993	14118	Mm.271644	NM_007993	ENSMUSG00000027204	Fbn1	AI536462|B430209H23|Fib-1|Tsk	fibrillin 1	protein-coding
common_peak1-10448-11-15--0.491306415748387-0.435191258261915	chr13	106947103	106947710	+	0	NA	Intergenic	Intergenic	713633	NM_008308	15550	Mm.4716	NM_008308	ENSMUSG00000021721	Htr1a	Gpcr18	5-hydroxytryptamine (serotonin) receptor 1A	protein-coding
common_peak2-32401-20-29--0.418815811017326-0.51032171069054	chrX	143518435	143519204	+	0	NA	intron (NM_008312, intron 4 of 5)	L1_Mur2|LINE|L1	19371	NR_037210	100526462		NR_037210	miRBase:MI0004300	Mir1298	mmu-mir-1298	microRNA 1298	ncRNA
common_peak2-22579-10-12--0.344024373132323-0.340565874754526	chr13	67332074	67332560	+	0	NA	Intergenic	RSINE1|SINE|B4	36875	NM_001048204	218311	Mm.82396	NM_183156	ENSMUSG00000051037	Zfp455	3732412P20Rik|Rslcan-10	zinc finger protein 455	protein-coding
common_peak2-27228-9-13--0.617741515653384-0.459837087125828	chr3	51660772	51661369	+	0	NA	intron (NM_001004176, intron 1 of 4)	intron (NM_001004176, intron 1 of 4)	195955	NM_174995	211666	Mm.24679	NM_174995	ENSMUSG00000074604	Mgst2	GST2|MGST-II	microsomal glutathione S-transferase 2	protein-coding
common_peak2-26766-14-16--0.188246680892695-0.308035960714963	chr2	141586914	141587748	+	0	NA	intron (NM_001013802, intron 7 of 18)	intron (NM_001013802, intron 7 of 18)	-1090119	NM_178382	71436	Mm.426781	NM_178382	ENSMUSG00000051379	Flrt3	5530600M07Rik|C430047I10Rik|mKIAA1469	fibronectin leucine rich transmembrane protein 3	protein-coding
common_peak1-8541-39-58--0.266881802442688-0.465606867440106	chr10	92721637	92722665	+	0	NA	intron (NM_001282967, intron 2 of 3)	B1_Mus2|SINE|Alu	51753	NM_013508	13713	Mm.4454	NM_013508	ENSMUSG00000008398	Elk3	D430049E23Rik|Erp|Etrp|Net|Sap-2	ELK3, member of ETS oncogene family	protein-coding
common_peak2-20819-7-7--0.200909169701811-0.97990265578305	chr10	128203621	128204053	+	0	NA	TTS (NM_001170869)	TTS (NM_001170869)	18326	NM_001253704	78428	Mm.27358	NM_030100	ENSMUSG00000064030	Wibg	A030010B05Rik|Pym	within bgcn homolog (Drosophila)	protein-coding
unique_peak1-66-7-1-1.79909083029819-1.80617997398389	chr1	36263833	36264314	+	0	NA	intron (NM_198899, intron 9 of 40)	L1_Rod|LINE|L1	37074	NM_198899	320011	Mm.261022	NM_198899	ENSMUSG00000037470	Uggt1	0910001L17Rik|A930007H10Rik|AA589501|AI414429|AI448372|C820010P03Rik|GT|UGT1|Ugcgl1	UDP-glucose glycoprotein glucosyltransferase 1	protein-coding
common_peak2-29397-2-7--1.91745425626332-1.45399745587252	chr6	86605812	86606214	+	0	NA	intron (NM_010751, intron 3 of 5)	intron (NM_010751, intron 3 of 5)	13140	NM_010751	17119	Mm.279580	NM_010751	ENSMUSG00000001156	Mxd1	AW122478|Mad|Mad1	MAX dimerization protein 1	protein-coding
unique_peak1-2878-10-2-1.77145284428761-2.09384600808989	chr17	36253432	36253946	+	0	NA	non-coding (NR_046286, exon 10 of 10)	non-coding (NR_046286, exon 10 of 10)	4691	NM_010395	15024	Mm.426031	NM_010395	ENSMUSG00000079491	H2-T10	H-2T10	histocompatibility 2, T region locus 10	protein-coding
unique_peak2-35903-2-5--1.50241675698448-1.08602067057793	chr19	4139356	4139610	+	0	NA	promoter-TSS (NM_206973)	promoter-TSS (NM_206973)	126	NM_144532	73660	Mm.379226	NM_144532	ENSMUSG00000024842	Cabp4	2410038D05Rik	calcium binding protein 4	protein-coding
unique_peak1-7237-12-5-1.06381348436648-1.78669045979184	chr9	75960825	75961440	+	0	NA	intron (NM_173731, intron 7 of 8)	MTD|LTR|MaLR	98348	NM_173731	208982	Mm.82306	NM_173731	ENSMUSG00000007908	Hmgcll1	BC037381	3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1	protein-coding
common_peak1-18959-64-96--0.134466440478525-0.376583285095203	chr9	52167634	52169235	+	0	NA	Intergenic	MTC|LTR|MaLR	-192218	NM_001162921	244871	Mm.295686	NM_001162921	ENSMUSG00000035164	Zc3h12c	A230108E06|C230027N18Rik|mKIAA1726	zinc finger CCCH type containing 12C	protein-coding
common_peak2-29882-38-59--0.335437936309988-0.547023400307267	chr6	112695899	112696883	+	0	NA	intron (NM_080448, intron 14 of 21)	intron (NM_080448, intron 14 of 21)	-49727	NM_001167730	58186	Mm.103812	NM_021385	ENSMUSG00000030254	Rad18	2810024C04Rik|Rad18sc	RAD18 homolog (S. cerevisiae)	protein-coding
common_peak2-21708-81-113-0.0391595888438241-0.316136652260595	chr11	107131144	107132356	+	0	NA	intron (NM_145823, intron 5 of 9)	ID_B1|SINE|B4	-81055	NM_001161329	68979	Mm.294617	NM_133702	ENSMUSG00000018433	Nol11	1500002M01Rik|AU015220|AU019874	nucleolar protein 11	protein-coding
unique_peak1-6662-34-4-3.0601404321139-8.24625970087838	chr8	17589353	17590885	+	0	NA	Intergenic	Intergenic	-54734	NM_053171	94109	Mm.436988	NM_053171	ENSMUSG00000060924	Csmd1	B930082H09|mKIAA1890	CUB and Sushi multiple domains 1	protein-coding
unique_peak2-34634-4-15--2.02346051385325-2.4322161449009	chr14	87140731	87141233	+	0	NA	intron (NM_019670, intron 27 of 27)	URR1A|DNA|MER1_type	399939	NM_019670	56419	Mm.440585	NM_019670	ENSMUSG00000022021	Diap3	4930417P13Rik|Dia2|Diaph3|Drf3|mDia2|mKIAA4117|p134MDia2	diaphanous homolog 3 (Drosophila)	protein-coding
common_peak1-9751-9-9--0.132314688483142-1.03275496310833	chr12	52503062	52503618	+	0	NA	intron (NM_029825, intron 10 of 24)	MER20|DNA|MER1_type	24773	NM_029825	76983	Mm.216511	NM_029825	ENSMUSG00000020952	Scfd1	3110021P21Rik|RA410|STXBP1L2	Sec1 family domain containing 1	protein-coding
common_peak1-13248-18-9-0.990991056340989-1.23014042908325	chr19	32186566	32187483	+	0	NA	Intergenic	Intergenic	-9394	NM_018830	54447	Mm.491229	NM_018830	ENSMUSG00000024887	Asah2	AI585898	N-acylsphingosine amidohydrolase 2	protein-coding
common_peak1-18211-57-49-0.622176850304204-1.66351452419095	chr8	24572162	24573534	+	0	NA	Intergenic	Intergenic	50874	NM_013834	20377	Mm.281691	NM_013834	ENSMUSG00000031548	Sfrp1	2210415K03Rik|AW011917|AW107218|AW742929|sFRP-1	secreted frizzled-related protein 1	protein-coding
common_peak2-29741-28-15-1.05295911982146-1.80321929531239	chr6	86219099	86219812	+	0	NA	intron (NM_031199, intron 3 of 5)	B4A|SINE|B4	74210	NM_031199	21802	Mm.137222	NM_031199	ENSMUSG00000029999	Tgfa	wa-1|wa1	transforming growth factor alpha	protein-coding
unique_peak1-26-12-2-2.06381348436648-2.79529063155376	chr1	9630404	9630938	+	0	NA	Intergenic	Intergenic	-9498	NR_015470	72481	Mm.279818	NR_015470	ENSMUSG00000079671	2610203C22Rik	2310007M24Rik	RIKEN cDNA 2610203C22 gene	ncRNA
unique_peak2-37057-5-9--1.02630843089322-1.21398586181642	chr3	138226114	138226596	+	0	NA	Intergenic	B1F2|SINE|Alu	36970	NR_035481	100316706		NR_035481	miRBase:MI0009952	Mir1956	mmu-mir-1956	microRNA 1956	ncRNA
common_peak2-19665-19-15-0.402687326661686-0.519193887192487	chr1	54601639	54602420	+	0	NA	intron (NM_001163314, intron 3 of 26)	MER68|LTR|ERVL	12499	NM_001163314	241062	Mm.103539	NM_175508	ENSMUSG00000073678	Pgap1	5033403E17Rik|9030223K07Rik|A530084K22|D230012E17Rik|oto	post-GPI attachment to proteins 1	protein-coding
unique_peak1-2049-7-2-1.21412832957703-1.45399745587252	chr15	27432240	27432733	+	0	NA	intron (NM_020332, intron 1 of 11)	intron (NM_020332, intron 1 of 11)	36054	NM_020332	11732	Mm.265264	NM_020332	ENSMUSG00000022265	Ank	Ankh|D15Ertd221e|ank|mKIAA1581	progressive ankylosis	protein-coding
common_peak2-26322-33-52--0.39658289203767-0.641883003087205	chr2	32966359	32967476	+	0	NA	Intergenic	MER33|DNA|MER1_type	-24193	NM_178888	99326	Mm.41290	NM_178888	ENSMUSG00000038860	Garnl3	AW120551	GTPase activating RANGAP domain-like 3	protein-coding
unique_peak1-698-10-3-1.35641534500877-1.75805390616669	chr10	80489152	80489670	+	0	NA	Intergenic	PB1D7|SINE|Alu	-1289	NM_145217	208666	Mm.44995	NM_145217	ENSMUSG00000043670	Diras1	Di-Ras1|Gbts1|RIG	DIRAS family, GTP-binding RAS-like 1	protein-coding
common_peak2-25138-7-7--0.200909169701811-0.97990265578305	chr18	42274893	42275255	+	0	NA	intron (NM_001146299, intron 4 of 8)	L1Md_F3|LINE|L1	61710	NM_001146299	269016	Mm.45472	NM_172966	ENSMUSG00000057719	Sh3rf2	2310046K19|9130023G24Rik|AI452083|Ppp1r39|RNF158	SH3 domain containing ring finger 2	protein-coding
unique_peak2-37872-1-5--2.2120195109379-1.32905871926422	chr5	137759995	137760277	+	0	NA	intron (NM_031406, intron 13 of 13)	ID_B1|SINE|B4	-4667	NM_011639	22051	Mm.27063	NM_011639	ENSMUSG00000023348	Trip6	-	thyroid hormone receptor interactor 6	protein-coding
common_peak2-26152-54-75--0.0748417518138513-0.314325647716191	chr2	15054360	15055881	+	0	NA	Intergenic	MusHAL1|LINE|L1	78131	NM_029466	75869	Mm.174068	NM_029466		Arl5b	4930587A11Rik|AW146430|Arl8	ADP-ribosylation factor-like 5B	protein-coding
common_peak1-9363-8-6-0.197867495889966-1.03789460276074	chr11	97686718	97687240	+	0	NA	intron (NM_010688, intron 4 of 6)	intron (NM_010688, intron 4 of 6)	-15115	NM_001080935	68127	Mm.110270	NM_001080935	ENSMUSG00000089676	B230217C12Rik	AI840637	RIKEN cDNA B230217C12 gene	protein-coding
common_peak2-26553-33-35-0.161412561083217-0.373466121463208	chr2	94405915	94406960	+	0	NA	Intergenic	Intergenic	-128133	NM_007466	11800	Mm.181824	NM_007466	ENSMUSG00000027193	Api5	AAC-11|AI196452	apoptosis inhibitor 5	protein-coding
common_peak1-14317-13-16--0.30899081061257-0.330004445983672	chr2	163515504	163516313	+	0	NA	intron (NM_001039390, intron 2 of 4)	intron (NM_001039390, intron 2 of 4)	-3865	NM_011106	18769	Mm.10091	NM_011106	ENSMUSG00000035268	Pkig	PKIgamma	protein kinase inhibitor, gamma	protein-coding
common_peak2-23429-10-24--1.28744084476596-1.59083646988122	chr15	61983971	61984646	+	0	NA	intron (NR_003368, intron 3 of 8)	ID4|SINE|ID	66698	NR_003523	67552	Mm.484027	NM_026230		H2afy3	4933432H23Rik	H2A histone family, member Y3	pseudo
common_peak2-27517-109-253--0.602525004884964-4.15206874654629	chr3	95658001	95660362	+	0	NA	intron (NM_027541, intron 1 of 15)	intron (NM_027541, intron 1 of 15)	495	NM_027541	70767	Mm.279872	NM_027541	ENSMUSG00000015748	Prpf3	3632413F13Rik	PRP3 pre-mRNA processing factor 3 homolog (yeast)	protein-coding
common_peak1-19336-44-54-0.0405331210438753-0.318638672819241	chrX	142965589	142966975	+	0	NA	Intergenic	Lx3B|LINE|L1	-430774	NM_008312	15560	Mm.439670	NM_008312	ENSMUSG00000041380	Htr2c	5-HT2C|5-HT2cR|5-HTR2C|5HT1c|Htr1c|SR1	5-hydroxytryptamine (serotonin) receptor 2C	protein-coding
common_peak2-28499-23-31--0.278232495490919-0.396392531282608	chr5	136051703	136052739	+	0	NA	Intergenic	Intergenic	-3308	NM_019577	56221	Mm.31505	NM_019577	ENSMUSG00000004814	Ccl24	CKb-6|MPIF-2|Scya24	chemokine (C-C motif) ligand 24	protein-coding
unique_peak1-4035-7-2-1.21412832957703-1.45399745587252	chr2	54567053	54567533	+	0	NA	intron (NM_173030, intron 3 of 12)	ORR1C2|LTR|MaLR	278495	NM_173030	271786	Mm.330227	NM_173030	ENSMUSG00000060988	Galnt13	A230002A12|A230020F20|BB182356	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 13	protein-coding
common_peak2-27560-22-29--0.259606490521114-0.36542888694933	chr3	96904522	96905373	+	0	NA	Intergenic	Intergenic	-57753	NM_019800	66659	Mm.101368	NM_019800	ENSMUSG00000028093	Acp6	5730559A09Rik|ACPL1|AU022842|mPACPL1	acid phosphatase 6, lysophosphatidic	protein-coding
unique_peak2-37583-9-14--0.717277189204299-0.53895475198017	chr5	36830115	36830644	+	0	NA	3' UTR (NM_025725, exon 1 of 1)	3' UTR (NM_025725, exon 1 of 1)	3142	NM_025725	66717	Mm.42368	NM_025725	ENSMUSG00000050677	Ccdc96	4921513E08Rik	coiled-coil domain containing 96	protein-coding
unique_peak1-339-19-1-3.40268732666169-5.15699611159533	chr1	134365360	134366076	+	0	NA	Intergenic	Intergenic	-8226	NM_172517	213464	Mm.132868	NM_172517	ENSMUSG00000026439	Rbbp5	4933411J24Rik|C330016J05	retinoblastoma binding protein 5	protein-coding
common_peak2-30921-10-9-0.0344872501214071-1.05503135781948	chr7	144775825	144776221	+	0	NA	Intergenic	Intergenic	146666	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
common_peak1-8988-22-30--0.30691220529947-0.399869693390336	chr11	59654399	59655382	+	0	NA	Intergenic	Intergenic	-1621	NM_011991	26572	Mm.40	NM_011991	ENSMUSG00000019373	Cops3	Csn3|Sgn3	COP9 (constitutive photomorphogenic) homolog, subunit 3 (Arabidopsis thaliana)	protein-coding
common_peak1-8649-10-17--0.813509656433543-0.699649909729472	chr10	127211119	127211653	+	0	NA	Intergenic	MTB-int|LTR|MaLR	-2075	NM_153133	103142	Mm.235814	NM_153133	ENSMUSG00000056148	Rdh9	AI121090|Crad3	retinol dehydrogenase 9	protein-coding
unique_peak1-3423-8-3-1.00522241794757-1.39487600375387	chr19	6156819	6157276	+	0	NA	Intergenic	MIRb|SINE|MIR	-7411	NM_028967	74481	Mm.159219	NM_028967	ENSMUSG00000039699	Batf2	4933430F08Rik	basic leucine zipper transcription factor, ATF-like 2	protein-coding
common_peak2-20078-16-24--0.525592547506663-0.561823156887258	chr1	153900190	153901020	+	0	NA	intron (NM_197990, intron 1 of 5)	intron (NM_197990, intron 1 of 5)	36845	NM_197990	69399	Mm.278031	NM_197990	ENSMUSG00000032666	1700025G04Rik	2610510E02Rik|2900042O04Rik|ENSMUSG00000073540	RIKEN cDNA 1700025G04 gene	protein-coding
unique_peak2-32660-5-22--2.22794229206287-2.81016724606745	chr1	134100201	134100963	+	0	NA	intron (NM_001033250, intron 1 of 3)	intron (NM_001033250, intron 1 of 3)	5917	NR_029777	723818		NR_029777	miRBase:MI0000646	Mir135b	Mirn135b	microRNA 135b	ncRNA
common_peak2-27140-4-9--1.34538860874061-1.36011389749466	chr3	27690437	27690697	+	0	NA	Intergenic	Intergenic	-81206	NM_173182	72007	Mm.38832	NM_173182	ENSMUSG00000039286	Fndc3b	1600019O04Rik|AW550168|Fad104|mKIAA4164	fibronectin type III domain containing 3B	protein-coding
common_peak2-26881-6-8--0.60452689106201-1.03789460276074	chr2	156839934	156840431	+	0	NA	3' UTR (NM_001164663, exon 15 of 15)	3' UTR (NM_001164663, exon 15 of 15)	-7371	NM_025853	66934	Mm.25410	NM_025853	ENSMUSG00000027635	Dsn1	1700022L09Rik|AW552447	DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)	protein-coding
unique_peak2-35295-1-7--2.62705701021674-1.80617997398389	chr17	10040497	10040881	+	0	NA	Intergenic	B4|SINE|B4	-71958	NR_045433	71092	Mm.243827	NR_045433		4930452A19Rik	4933424P20Rik	RIKEN cDNA 4930452A19 gene	ncRNA
common_peak2-27500-16-22--0.405298313788951-0.440610794044987	chr3	95014942	95015619	+	0	NA	intron (NM_029885, intron 2 of 9)	B1_Mur1|SINE|Alu	-6099	NR_108026	100504029	Mm.478537	NR_108026	ENSMUSG00000097167	Gm16740	-	predicted gene, 16740	ncRNA
common_peak1-17969-10-13--0.450939577048835-0.386243247519795	chr7	132316424	132316918	+	0	NA	Intergenic	RMER1A|Other|Other	176629	NR_045804	71208	Mm.159465	NM_172408		4933440M02Rik	-	RIKEN cDNA 4933440M02 gene	ncRNA
unique_peak2-35631-2-5--1.50241675698448-1.08602067057793	chr17	87567981	87568369	+	0	NA	Intergenic	Intergenic	26107	NR_046016	399626	Mm.396062	NR_046016		C330024C12Rik	-	RIKEN cDNA C330024C12 gene	ncRNA
unique_peak2-34652-3-6--1.22133801201688-1.08602067057793	chr14	118237172	118237542	+	0	NA	intron (NM_011821, intron 4 of 8)	intron (NM_011821, intron 4 of 8)	115712	NR_105747	102465148		NR_105747	miRBase:MI0021586	Mir6239	mmu-mir-6239	microRNA mir-6239	ncRNA
common_peak2-27527-13-10-0.319040412000471-0.446472590016315	chr3	95726304	95726908	+	0	NA	Intergenic	L1ME1|LINE|L1	-6574	NM_001253758	66471	Mm.218657	NM_023210	ENSMUSG00000015749	Anp32e	2810018A15Rik|AI047746|AI326868|CPD1|LANP-L|LANPL|mLANP-L	acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	protein-coding
common_peak2-20731-10-7-0.356415345008769-1.12966497611638	chr10	99237149	99237573	+	0	NA	Intergenic	Intergenic	-15069	NM_027945	71832	Mm.483162	NM_027945	ENSMUSG00000046934	Csl	1700007H16Rik	citrate synthase like	protein-coding
common_peak1-16433-19-14-0.495796731053168-0.607095980551316	chr5	134551412	134552235	+	0	NA	Intergenic	Lx6|LINE|L1	-23795	NM_030719	80909	Mm.45218	NM_030719		Gatsl2	7530428J21Rik|AW742413|Gats|Gatsl1	GATS protein-like 2	protein-coding
unique_peak1-7035-14-8-0.729291158915332-0.771068449301682	chr8	126833356	126833997	+	0	NA	intron (NM_139272, intron 3 of 15)	intron (NM_139272, intron 3 of 15)	78382	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
common_peak2-31912-11-8-0.338768582809301-1.14218153353838	chr9	59694958	59695281	+	0	NA	intron (NM_173018, intron 16 of 43)	L2a|LINE|L2	96138	NM_173018	270163	Mm.249545	NM_173018	ENSMUSG00000039585	Myo9a	4732465J09Rik|C130068I12Rik|C230003M11	myosin IXa	protein-coding
common_peak2-23214-34-21-0.922636908363969-1.85054049304327	chr15	3270450	3271064	+	0	NA	intron (NM_001286370, intron 10 of 10)	intron (NM_001286370, intron 10 of 10)	-17231	NM_001166063	100039139	Mm.455610	NM_001166063	ENSMUSG00000091119	Ccdc152	ENSMUSG00000071814	coiled-coil domain containing 152	protein-coding
common_peak1-16888-20-29--0.418815811017326-0.51032171069054	chr6	71632170	71632996	+	0	NA	Intergenic	B1F|SINE|Alu	-25092	NM_178608	52250	Mm.146332	NM_178608	ENSMUSG00000052852	Reep1	D6Ertd253e	receptor accessory protein 1	protein-coding
unique_peak2-34109-1-8--2.79698201165906-2.05605744720049	chr13	19590730	19591010	+	0	NA	Intergenic	Intergenic	-103249	NM_024270	76205	Mm.41940	NM_024270	ENSMUSG00000003062	Stard3nl	0610035N01Rik|6530409L22Rik|AW124774|MENTHO	STARD3 N-terminal like	protein-coding
common_peak2-22085-1-8--2.79698201165906-2.05605744720049	chr12	79006385	79006725	+	0	NA	Intergenic	Intergenic	-321087	NM_172952	268566	Mm.341742	NM_145965	ENSMUSG00000047454	Gphn	5730552E08Rik|AI662856|BC027112|C230040D23|GPH|GPHRYN|geph	gephyrin	protein-coding
common_peak1-18654-16-17--0.0516613591742505-0.301029995663984	chr8	111876082	111876726	+	0	NA	Intergenic	Intergenic	-11596	NR_002928	384864	Mm.390083	NR_002928		Gm1943	-	WD repeat domain 70 pseudogene	pseudo
unique_peak2-38541-5-12--1.40482005414695-1.62698961692433	chr7	49212617	49213183	+	0	NA	Intergenic	L1VL2|LINE|L1	-84860	NM_001105055	628422	Mm.469902	NM_001105055	ENSMUSG00000090383	Vmn2r58	EG628422	vomeronasal 2, receptor 58	protein-coding
unique_peak2-34837-2-7--1.91745425626332-1.45399745587252	chr15	75821628	75822060	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-2355	NM_177922	332110	Mm.40843	NM_177922	ENSMUSG00000063704	Mapk15	BC048082	mitogen-activated protein kinase 15	protein-coding
common_peak2-27094-21-29--0.337401330342283-0.403610417161439	chr3	121601430	121602332	+	0	NA	Intergenic	Intergenic	-54363	NM_172525	214137	Mm.229287	NM_172525	ENSMUSG00000039831	Arhgap29	6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1	Rho GTPase activating protein 29	protein-coding
common_peak1-9136-21-46--0.985099586411402-1.82819694957564	chr11	75588038	75588779	+	0	NA	intron (NM_007873, intron 6 of 8)	PB1D10|SINE|Alu	21151	NM_007873	13447	Mm.5137	NM_007873	ENSMUSG00000020848	Doc2b	-	double C2, beta	protein-coding
common_peak2-25464-5-7--0.704380336005853-1.01466476204226	chr19	4244640	4244961	+	0	NA	Intergenic	Intergenic	12901	NM_027196	69745	Mm.32518	NM_027196	ENSMUSG00000024854	Pold4	2410012M21Rik|AI463381|AW060307|Polds|p12	polymerase (DNA-directed), delta 4	protein-coding
common_peak1-13339-33-45--0.192224393531484-0.36493371439645	chr19	43939410	43940864	+	0	NA	intron (NM_028029, intron 10 of 15)	Lx7|LINE|L1	26844	NR_033472	100038628	Mm.212585	NR_033472	ENSMUSG00000074828	Gm10768	ENSMUSG00000074828	predicted gene 10768	ncRNA
common_peak2-20696-9-10--0.269818212233077-1.05503135781948	chr10	93094880	93095298	+	0	NA	Intergenic	ORR1B2|LTR|MaLR	-8705	NM_021320	57764	Mm.483868	NM_021320		Ntn4	-	netrin 4	protein-coding
common_peak2-29530-17-30--0.735899972181837-0.841847921495509	chr6	38298521	38299613	+	0	NA	intron (NM_028421, intron 1 of 11)	B2_Mm1a|SINE|B2	5536	NM_028864	78781	Mm.25243	NM_028421	ENSMUSG00000029826	Zc3hav1	1200014N16Rik|2900058M19Rik|9130009D18Rik|9830115L13Rik|ARTD13|D6Bwg1452e|ZAP	zinc finger CCCH type, antiviral 1	protein-coding
common_peak1-9974-8-16--1.08224042330277-0.891319708951328	chr12	118836442	118836952	+	0	NA	intron (NM_175930, intron 8 of 27)	intron (NM_175930, intron 8 of 27)	81745	NM_175930	217944	Mm.227642	NM_175930	ENSMUSG00000041992	Rapgef5	4932413M22|C86120|D030051B22Rik|GFR|Mrgef|mKIAA0277|mmr-gef	Rap guanine nucleotide exchange factor (GEF) 5	protein-coding
common_peak1-13747-10-18--0.891512168434816-0.804350088532826	chr2	32846806	32847165	+	0	NA	intron (NM_178888, intron 26 of 28)	intron (NM_178888, intron 26 of 28)	-9409	NM_019488	56017	Mm.305754	NM_019488	ENSMUSG00000026791	Slc2a8	D2Ertd44e|GLUT8|GlutX1	solute carrier family 2, (facilitated glucose transporter), member 8	protein-coding
common_peak1-16756-12-8-0.478850983645327-0.562038191119709	chr6	34481206	34481924	+	0	NA	Intergenic	Intergenic	55209	NM_007563	12183	Mm.282863	NM_007563	ENSMUSG00000038871	Bpgm	AI323730|AL022789|C86192	2,3-bisphosphoglycerate mutase	protein-coding
unique_peak1-5735-19-4-2.08075923177432-3.05312482518673	chr6	43667361	43668099	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-51556	NM_013861	29807	Mm.320979	NM_013861	ENSMUSG00000029735	Tpk1	-	thiamine pyrophosphokinase	protein-coding
common_peak1-13678-22-8-1.47735910364509-2.29727994934156	chr2	29054768	29055599	+	0	NA	intron (NM_133501, intron 5 of 8)	B1_Mus2|SINE|Alu	48377	NM_133501	171171	Mm.442448	NM_133500	ENSMUSG00000035513	Ntng2	2610016D08Rik|Lmnt2	netrin G2	protein-coding
unique_peak2-32450-1-9--2.94898510510411-2.31132995230379	chr1	7708021	7708385	+	0	NA	Intergenic	MusHAL1|LINE|L1	629202	NM_183028	319263	Mm.21539	NM_183028	ENSMUSG00000051285	Pcmtd1	8430411F12Rik|A030012M09Rik	protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	protein-coding
unique_peak1-4828-19-6-1.59533240460408-2.21753093801298	chr3	145633021	145633902	+	0	NA	Intergenic	Intergenic	-17373	NM_001166064	214804	Mm.268854	NM_001166064	ENSMUSG00000036863	Syde2	C430017H16Rik	synapse defective 1, Rho GTPase, homolog 2 (C. elegans)	protein-coding
common_peak2-30624-33-47--0.253624938195627-0.423463616707761	chr7	92669014	92669999	+	0	NA	Intergenic	Intergenic	48092	NM_001105183	670940	Mm.469908	NM_001105183	ENSMUSG00000090806	Vmn2r70	EG620835	vomeronasal 2, receptor 70	protein-coding
common_peak2-23215-16-18--0.129663871175524-0.307235046933848	chr15	3299841	3300386	+	0	NA	intron (NM_001286370, intron 3 of 10)	intron (NM_001286370, intron 3 of 10)	-46587	NM_001166063	100039139	Mm.455610	NM_001166063	ENSMUSG00000091119	Ccdc152	ENSMUSG00000071814	coiled-coil domain containing 152	protein-coding
common_peak1-13614-28-34--0.0763238971235038-0.304271119602326	chr2	23039192	23040303	+	0	NA	intron (NM_013771, intron 9 of 18)	intron (NM_013771, intron 9 of 18)	-23249	NM_027635	70981	Mm.314026	NM_027635	ENSMUSG00000026774	4931423N10Rik	-	RIKEN cDNA 4931423N10 gene	protein-coding
common_peak1-14604-37-26-0.771105569322351-1.52341724501298	chr3	51662313	51663700	+	0	NA	intron (NM_001004176, intron 1 of 4)	intron (NM_001004176, intron 1 of 4)	197891	NM_174995	211666	Mm.24679	NM_174995	ENSMUSG00000074604	Mgst2	GST2|MGST-II	microsomal glutathione S-transferase 2	protein-coding
unique_peak1-6183-18-5-1.7279566505072-2.39372960542229	chr6	146010236	146011078	+	0	NA	Intergenic	Intergenic	127990	NM_010656	16651	Mm.49689	NM_010656	ENSMUSG00000030255	Sspn	Krag	sarcospan	protein-coding
unique_peak1-76-13-2-2.19350952991661-3.03832868024006	chr1	39105735	39106313	+	0	NA	Intergenic	Intergenic	61365	NM_026850	68833	Mm.28121	NM_026850	ENSMUSG00000026078	Pdcl3	1110061A19Rik|C80025|Viaf1	phosducin-like 3	protein-coding
common_peak2-29115-21-29--0.337401330342283-0.403610417161439	chr5	123142189	123142769	+	0	NA	Intergenic	ORR1B1|LTR|MaLR	-15087	NM_011026	18438	Mm.290884	NM_011026	ENSMUSG00000029470	P2rx4	AI504491|AW555605|D5Ertd444e|P2X4	purinergic receptor P2X, ligand-gated ion channel 4	protein-coding
common_peak1-8754-11-9-0.186765489364251-0.344532117358383	chr11	4703976	4704574	+	0	NA	intron (NM_001252250, intron 6 of 16)	intron (NM_001252250, intron 6 of 16)	28863	NM_001252253	18016	Mm.297109	NM_010898	ENSMUSG00000009073	Nf2	merlin	neurofibromatosis 2	protein-coding
common_peak1-8473-13-25--0.921967687503323-0.983972868822056	chr10	80261202	80262014	+	0	NA	promoter-TSS (NM_023900)	promoter-TSS (NM_023900)	128	NM_013651	20222	Mm.358633	NM_013651	ENSMUSG00000020211	Sf3a2	66kDa|AW047242|PRP11|SFA66|Sap62	splicing factor 3a, subunit 2	protein-coding
unique_peak1-6002-10-3-1.35641534500877-1.75805390616669	chr6	103034360	103034837	+	0	NA	Intergenic	MLT1J2|LTR|MaLR	290220	NR_105792	102466636		NR_105792	miRBase:MI0021902	Mir6373	mmu-mir-6373	microRNA mir-6373	ncRNA
unique_peak1-2242-10-5-0.771452844287613-1.33892459842472	chr15	76625550	76626091	+	0	NA	intron (NM_198420, intron 1 of 10)	intron (NM_198420, intron 1 of 10)	22780	NM_001168288	223666	Mm.322931	NM_198420	ENSMUSG00000033697	Arhgap39	9530053N22|AI843066|D15Wsu169e|Kiaa1688|Porf-2	Rho GTPase activating protein 39	protein-coding
unique_peak2-32976-0-5--3.42509343119537-1.32905871926422	chr10	54085579	54085972	+	0	NA	Intergenic	Intergenic	290047	NR_038016	100502920	Mm.403982	NR_038016	ENSMUSG00000097069	Gm16998	-	predicted gene, 16998	ncRNA
common_peak1-18281-6-8--0.60452689106201-1.03789460276074	chr8	41015383	41015872	+	0	NA	Intergenic	Intergenic	-287595	NM_001113326	20288	Mm.239291	NM_031195	ENSMUSG00000025044	Msr1	MRS-A|MSR|MSR-A|SR-AI|SR-AII|Scara1|Scvr	macrophage scavenger receptor 1	protein-coding
common_peak1-17017-36-25-0.778881368026663-1.55933022783608	chr6	91016905	91017958	+	0	NA	intron (NM_018815, intron 13 of 39)	L1MB2|LINE|L1	49389	NM_018815	54563	Mm.28162	NM_018815	ENSMUSG00000030091	Nup210	9830001L10|AI836801|Pom210|gp190|gp210	nucleoporin 210	protein-coding
common_peak2-29100-5-9--1.02630843089322-1.21398586181642	chr5	122524309	122524763	+	0	NA	Intergenic	L1MB4|LINE|L1	-26453	NM_010861	17906	Mm.1529	NM_010861	ENSMUSG00000013936	Myl2	MLC-2|MLC-2v|Mlc2v|Mylpc	myosin, light polypeptide 2, regulatory, cardiac, slow	protein-coding
common_peak1-11089-26-15-0.927899092158462-1.40782320807777	chr15	59511437	59512620	+	0	NA	Intergenic	Intergenic	31819	NM_144549	211770	Mm.40298	NM_144549	ENSMUSG00000032501	Trib1	A530090O15Rik|TRB-1|Trb1	tribbles homolog 1 (Drosophila)	protein-coding
common_peak1-13626-15-16--0.075298090694683-0.301029995663976	chr2	25224065	25224765	+	0	NA	Intergenic	MTB|LTR|MaLR	-3140	NM_001290407	72080	Mm.250293	NM_001081085	ENSMUSG00000026955	Sapcd2	2010317E24Rik|6030458L21Rik|AL033337|ang	suppressor APC domain containing 2	protein-coding
unique_peak1-7429-12-5-1.06381348436648-1.78669045979184	chrX	166662302	166662971	+	0	NA	Intergenic	Intergenic	-245787	NR_029457	654820	Mm.34441	NM_001039559	ENSMUSG00000072844	G530011O06Rik	-	RIKEN cDNA G530011O06 gene	ncRNA
unique_peak1-2710-9-2-1.60465090568306-1.87199725847353	chr16	91938069	91938593	+	0	NA	Intergenic	Intergenic	-6456	NM_138597	28080	Mm.41	NM_138597	ENSMUSG00000022956	Atp5o	ATPO|D12Wsu28e|OSCP	ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	protein-coding
unique_peak1-3272-6-6--0.241956811677302-0.947717972411649	chr18	70567694	70568086	+	0	NA	Intergenic	Intergenic	-64218	NM_029019	170461	Mm.83623	NM_029019	ENSMUSG00000079608	Stard6	1700011K09Rik|4833424I06Rik|4933429L05Rik|AI644424	StAR-related lipid transfer (START) domain containing 6	protein-coding
unique_peak2-37989-1-5--2.2120195109379-1.32905871926422	chr6	17841719	17841981	+	0	NA	intron (NM_022332, intron 10 of 15)	intron (NM_022332, intron 10 of 15)	138595	NM_023653	22413	Mm.33653	NM_023653	ENSMUSG00000010797	Wnt2	2610510E18Rik|Int1l1|Irp|Mirp|Wnt-2|Wnt2a	wingless-type MMTV integration site family, member 2	protein-coding
common_peak2-23085-21-31--0.430510734733764-0.49501414494053	chr14	76413886	76414717	+	0	NA	Intergenic	Intergenic	-3629	NM_026816	68705	Mm.20415	NM_026816	ENSMUSG00000067995	Gtf2f2	1110031C13Rik|AI326315	general transcription factor IIF, polypeptide 2	protein-coding
common_peak2-22947-41-39-0.379220609961298-0.705686442909787	chr14	48446003	48446819	+	0	NA	Intergenic	Intergenic	-72128	NR_045959	73961	Mm.390702	NR_045959		4930447J18Rik	4930425M13Rik	RIKEN cDNA 4930447J18 gene	ncRNA
unique_peak2-38373-2-6--1.72480917832092-1.26211192963361	chr7	12962036	12962321	+	0	NA	Intergenic	L1Md_T|LINE|L1	-14065	NM_134233	171267	Mm.434341	NM_134233	ENSMUSG00000066803	Vmn1r84	V1rg11	vomeronasal 1 receptor 84	protein-coding
unique_peak1-2904-10-0-3.35641534500877-3.31132995230379	chr17	45971119	45971593	+	0	NA	Intergenic	Intergenic	-100563	NM_028164	72240	Mm.482897	NM_028164	ENSMUSG00000094690	1600014C23Rik	-	RIKEN cDNA 1600014C23 gene	protein-coding
unique_peak1-623-7-0-2.79909083029819-2.40823996531185	chr10	24496555	24496965	+	0	NA	intron (NM_134005, intron 22 of 24)	intron (NM_134005, intron 22 of 24)	59241	NM_134005	209558	Mm.338425	NM_134005	ENSMUSG00000019989	Enpp3	AI876438|CD203c	ectonucleotide pyrophosphatase/phosphodiesterase 3	protein-coding
common_peak2-25061-75-113--0.0938230224214562-0.336567586798303	chr18	34506248	34507946	+	0	NA	intron (NM_007874, intron 4 of 4)	intron (NM_007874, intron 4 of 4)	16298	NM_025527	66384	Mm.29452	NM_025527	ENSMUSG00000014504	Srp19	2310020D23Rik	signal recognition particle 19	protein-coding
unique_peak2-38019-4-8--1.19338551529556-1.21878474469819	chr6	33399267	33399646	+	0	NA	intron (NM_009148, intron 9 of 17)	Lx4B|LINE|L1	200306	NM_009148	20336	Mm.265512	NM_009148		Exoc4	C78892|Sec8|Sec8l1	exocyst complex component 4	protein-coding
common_peak2-19850-29-43--0.347141538022187-0.479515789778906	chr1	91250309	91251242	+	0	NA	Intergenic	Intergenic	51933	NR_040482	77331	Mm.374962	NR_040482		C030007H22Rik	-	RIKEN cDNA C030007H22 gene	ncRNA
unique_peak2-37520-8-11--0.579740082773585-1.14218153353838	chr5	21424940	21425603	+	0	NA	intron (NM_011261, intron 51 of 63)	intron (NM_011261, intron 51 of 63)	-53849	NM_030727	80979	Mm.160370	NM_030727	ENSMUSG00000029015	Slc26a5	Pres|prestin	solute carrier family 26, member 5	protein-coding
common_peak2-22888-19-29--0.504203268946832-0.580176690544129	chr14	31962684	31963513	+	0	NA	exon (NM_138672, exon 35 of 69)	exon (NM_138672, exon 35 of 69)	15059	NM_027289	70021	Mm.261681	NM_027289	ENSMUSG00000071547	Nt5dc2	2510015F01Rik	5'-nucleotidase domain containing 2	protein-coding
common_peak1-15428-32-36-0.0696386535907099-0.327094617740873	chr4	88955684	88956689	+	0	NA	intron (NM_007670, intron 1 of 1)	intron (NM_007670, intron 1 of 1)	755	NM_007670	12579	Mm.423094	NM_007670	ENSMUSG00000073802	Cdkn2b	AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b	cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)	protein-coding
unique_peak2-33311-3-7--1.41398308995928-1.23214870625617	chr11	5902227	5902662	+	0	NA	intron (NM_001174053, intron 3 of 19)	intron (NM_001174053, intron 3 of 19)	46683	NM_019661	56418	Mm.294821	NM_019661	ENSMUSG00000002741	Ykt6	0610042I15Rik|1810013M05Rik|AW105923	YKT6 homolog (S. Cerevisiae)	protein-coding
unique_peak1-4178-8-1-2.00522241794757-2.05605744720049	chr2	113610754	113611180	+	0	NA	Intergenic	Intergenic	-12162	NM_011824	23892	Mm.166318	NM_011824		Grem1	Cktsf1b1|Drm|Grem|ld	gremlin 1	protein-coding
common_peak1-16189-16-16-0.0308008010177225-0.307611222530525	chr5	92282595	92283253	+	0	NA	Intergenic	Intergenic	-86598	NR_045383	73452	Mm.396233	NR_045383		1700063O14Rik	-	RIKEN cDNA 1700063O14 gene	ncRNA
unique_peak1-6106-7-1-1.79909083029819-1.80617997398389	chr6	125592420	125592948	+	0	NA	exon (NM_011708, exon 28 of 52)	exon (NM_011708, exon 28 of 52)	-47753	NM_153589	243634	Mm.333398	NM_153589	ENSMUSG00000038115	Ano2	BC033409|Tmem16b	anoctamin 2	protein-coding
unique_peak1-6820-10-4-1.03448725012141-1.5150158574804	chr8	75090048	75090708	+	0	NA	3' UTR (NM_172396, exon 5 of 5)	3' UTR (NM_172396, exon 5 of 5)	4569	NM_172396	66818	Mm.22565	NM_172396	ENSMUSG00000044600	Smim7	9130011J15Rik	small integral membrane protein 7	protein-coding
common_peak1-9131-30-14-1.26278481388335-2.47671208917977	chr11	75537761	75538806	+	0	NA	Intergenic	B4|SINE|B4	-8106	NM_009536	22627	Mm.234700	NM_009536	ENSMUSG00000020849	Ywhae	AU019196	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide	protein-coding
unique_peak1-6083-8-1-2.00522241794757-2.05605744720049	chr6	122674127	122674576	+	0	NA	Intergenic	B2_Mm2|SINE|B2	16768	NM_001289828	71950	Mm.6047	NM_028016	ENSMUSG00000012396	Nanog	2410002E02Rik|ENK|ecat4	Nanog homeobox	protein-coding
unique_peak2-34626-4-7--1.02346051385325-1.09384600808989	chr14	76699180	76699531	+	0	NA	Intergenic	Intergenic	-116273	NM_207652	21807	Mm.153272	NM_009366	ENSMUSG00000022010	Tsc22d1	AA589566|AW105905|Egr5|TSC-22|Tgfb1i4|Tsc|Tsc22	TSC22 domain family, member 1	protein-coding
common_peak2-21547-9-8-0.0196884049619079-1.03275496310833	chr11	96005361	96005810	+	0	NA	intron (NM_172799, intron 7 of 14)	intron (NM_172799, intron 7 of 14)	10485	NM_172799	237930	Mm.249912	NM_172799	ENSMUSG00000038756	Ttll6	4932418K24Rik|D11Moh43e|D11Moh44e|t8130b59	tubulin tyrosine ligase-like family, member 6	protein-coding
common_peak1-8595-17-21--0.24113528043226-0.322753776620787	chr10	111473031	111473843	+	0	NA	Intergenic	Intergenic	-23808	NM_027018	69286	Mm.47058	NM_027018	ENSMUSG00000020213	Glipr1l1	1700011E04Rik	GLI pathogenesis-related 1 like 1	protein-coding
unique_peak1-4556-19-5-1.81772482594053-2.59995804677862	chr3	50457529	50458314	+	0	NA	Intergenic	Intergenic	-210386	NM_011990	26570	Mm.260988	NM_011990	ENSMUSG00000027737	Slc7a11	9930009M05Rik|AI451155|sut|xCT	solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	protein-coding
unique_peak2-39118-1-13--3.43441193227435-3.36932189928148	chr8	83165419	83166051	+	0	NA	intron (NM_001167898, intron 2 of 7)	L1Md_T|LINE|L1	30797	NM_001167898	333315	Mm.134296	NM_001167898	ENSMUSG00000042353	Frem3	Gm795|NV2	Fras1 related extracellular matrix protein 3	protein-coding
unique_peak2-35342-3-6--1.22133801201688-1.08602067057793	chr17	24469524	24470003	+	0	NA	intron (NM_001031621, intron 4 of 29)	intron (NM_001031621, intron 4 of 29)	14434	NM_001031621	381072	Mm.328842	NM_001031621	ENSMUSG00000035435	Abca17	-	ATP-binding cassette, sub-family A (ABC1), member 17	protein-coding
common_peak2-26749-12-6-0.841421063030034-1.58711810488664	chr2	136618227	136618646	+	0	NA	Intergenic	L1Md_F3|LINE|L1	79250	NM_001291056	20614	Mm.45953	NM_011428	ENSMUSG00000027273	Snap25	Bdr|GENA70|SNAP-25|SUP|sp	synaptosomal-associated protein 25	protein-coding
unique_peak1-6640-10-4-1.03448725012141-1.5150158574804	chr8	10970005	10970516	+	0	NA	Intergenic	(CAGA)n|Simple_repeat|Simple_repeat	-37590	NR_046017	619321	Mm.403007	NR_046017	ENSMUSG00000096938	9530052E02Rik	-	RIKEN cDNA 9530052E02 gene	ncRNA
unique_peak2-39282-7-17--1.37083417114412-1.23399803405144	chr8	122282105	122282836	+	0	NA	TTS (NM_026922)	TTS (NM_026922)	19846	NM_028883	74347	Mm.358759	NM_028883	ENSMUSG00000034105	Tldc1	4632415K11Rik|Kiaa1609	TBC/LysM associated domain containing 1	protein-coding
common_peak2-32165-23-39--0.600160590378282-0.869438253311888	chr9	110407258	110408289	+	0	NA	intron (NM_001163569, intron 10 of 20)	PB1D9|SINE|Alu	-27328	NM_001081340	235626	Mm.288949	NM_001081340	ENSMUSG00000044791	Setd2	4921524K10Rik|BC031601|KMT3A	SET domain containing 2	protein-coding
common_peak1-14496-57-72-0.0762084811989112-0.337470937500802	chr3	10439330	10440434	+	0	NA	intron (NM_029068, intron 1 of 7)	CpG	248	NM_029068	74718	Mm.440548	NM_029068	ENSMUSG00000027534	Snx16	4930522N22Rik|AI117577|AI747675	sorting nexin 16	protein-coding
common_peak1-7781-20-30--0.466121525795682-0.569352520859861	chr1	93803732	93804606	+	0	NA	Intergenic	Intergenic	106115	NM_007855	13345	Mm.9474	NM_007855	ENSMUSG00000007805	Twist2	Dermo1|bHLHa39	twist basic helix-loop-helix transcription factor 2	protein-coding
common_peak2-21893-37-62--0.451286852014098-0.817648941027521	chr12	3426719	3427773	+	0	NA	promoter-TSS (NR_030694)	promoter-TSS (NR_030694)	389	NM_172421	75302	Mm.120475	NM_172421	ENSMUSG00000037486	Asxl2	4930556B16Rik|mKIAA1685	additional sex combs like 2 (Drosophila)	protein-coding
common_peak2-27244-22-55--1.1600708169702-2.80467882841136	chr3	52268399	52270078	+	0	NA	Intergenic	Intergenic	196979	NM_019739	56458	Mm.29891	NM_019739	ENSMUSG00000044167	Foxo1	AI876417|Afxh|FKHR|Fkhr1|Foxo1a	forkhead box O1	protein-coding
common_peak1-13083-12-7-0.648775985087639-0.697979855752659	chr19	6969292	6969754	+	0	NA	Intergenic	Intergenic	14612	NM_012021	54683	Mm.279782	NM_012021		Prdx5	AOEB166|AOPP|Pmp20|Prdx6|PrxV	peroxiredoxin 5	protein-coding
unique_peak2-33727-6-7--0.434601889619698-0.97990265578305	chr11	115778959	115779446	+	0	NA	intron (NM_130454, intron 6 of 18)	AT_rich|Low_complexity|Low_complexity	5871	NM_001162998	68528	Mm.441893	NM_001162998	ENSMUSG00000075420	Smim6	1110017F19Rik	small integral membrane protein 6	protein-coding
unique_peak1-2490-14-2-2.31425365963649-3.28500101358144	chr16	10365913	10366664	+	0	NA	intron (NM_001291001, intron 5 of 6)	intron (NM_001291001, intron 5 of 6)	29253	NM_001099275	70426	Mm.142181	NM_001099275	ENSMUSG00000039179	Tekt5	3300001K11Rik	tektin 5	protein-coding
common_peak1-13249-15-12-0.311725032414564-0.425539671739611	chr19	32196692	32197589	+	0	NA	TTS (NM_001168526)	TTS (NM_001168526)	-19510	NM_018830	54447	Mm.491229	NM_018830	ENSMUSG00000024887	Asah2	AI585898	N-acylsphingosine amidohydrolase 2	protein-coding
common_peak2-22279-60-81--0.00326014299755251-0.302362195683184	chr13	9093794	9095027	+	0	NA	intron (NM_172585, intron 1 of 17)	intron (NM_172585, intron 1 of 17)	1259	NM_172585	217980	Mm.234944	NM_172585	ENSMUSG00000033499	Larp4b	A630096F19|AI256361|D13Wsu64e|Larp5	La ribonucleoprotein domain family, member 4B	protein-coding
common_peak1-18871-24-28--0.0647710923598552-0.301029995663979	chr9	22306983	22307795	+	0	NA	intron (NM_181316, intron 3 of 21)	intron (NM_181316, intron 3 of 21)	27230	NM_178415	319845	Mm.176725	NM_178415	ENSMUSG00000035919	Bbs9	E130103I17Rik	Bardet-Biedl syndrome 9 (human)	protein-coding
unique_peak2-35198-9-7-0.18961340640422-1.05908390183068	chr16	64885024	64885501	+	0	NA	Intergenic	RMER10A|LTR|ERVL	33351	NM_178647	106143	Mm.10160	NM_178647	ENSMUSG00000054604	Cggbp1	AA960172|AL023996|AW045841	CGG triplet repeat binding protein 1	protein-coding
unique_peak1-2813-10-4-1.03448725012141-1.5150158574804	chr17	25164974	25165601	+	0	NA	intron (NM_134126, intron 5 of 29)	B3|SINE|B2	12256	NM_134126	106633	Mm.32802	NM_134126	ENSMUSG00000024169	Ift140	AI661311|Tce5|Wdtc2|mKIAA0590	intraflagellar transport 140	protein-coding
unique_peak2-39903-4-6--0.830815435910851-0.989110657569874	chrX	95658501	95658908	+	0	NA	Intergenic	L1Md_F2|LINE|L1	313615	NM_013476	11835	Mm.39005	NM_013476		Ar	AW320017|Tfm	androgen receptor	protein-coding
common_peak2-24239-11-19--0.813234510635749-0.769930178837768	chr16	90349178	90349868	+	0	NA	Intergenic	Intergenic	-37119	NM_015755	26559	Mm.125874	NM_015755	ENSMUSG00000053414	Hunk	Bstk1|Mak-v	hormonally upregulated Neu-associated kinase	protein-coding
common_peak1-14427-54-20-1.78076833885097-7.07584913729011	chr2	180276531	180278481	+	0	NA	3' UTR (NM_018766, exon 4 of 4)	3' UTR (NM_018766, exon 4 of 4)	-38503	NM_028479	73247	Mm.426558	NM_028479	ENSMUSG00000027569	Mrgbp	1600027N09Rik|AW060503|C80444	MRG/MORF4L binding protein	protein-coding
common_peak2-21825-32-58--0.603551030142182-1.11442465192823	chr11	120098786	120099609	+	0	NA	intron (NM_198423, intron 2 of 27)	CpG-2927	4936	NM_198423	268515	Mm.309498	NM_198423	ENSMUSG00000039741	Bahcc1	B930044J06|BC060615	BAH domain and coiled-coil containing 1	protein-coding
common_peak1-17758-19-9-1.08075923177432-1.37307999835977	chr7	89444740	89445699	+	0	NA	intron (NM_001277954, intron 8 of 8)	intron (NM_001277954, intron 8 of 8)	36801	NM_001277954	20408	Mm.736	NM_017400		Sh3gl3	EEN-B2|SH3P13|Sh3d2c|Sh3d2c2	SH3-domain GRB2-like 3	protein-coding
unique_peak2-39703-11-40--1.84885842036647-4.10519998339124	chr9	114025876	114026815	+	0	NA	Intergenic	RLTR11A2|LTR|ERVK	59873	NM_001101510	382111	Mm.376140	NM_001101510	ENSMUSG00000086596	Susd5	Gm1126	sushi domain containing 5	protein-coding
common_peak1-8722-25-11-1.27688740462395-2.12469164491494	chr11	106659740	106660799	+	0	NA	intron (NM_177088, intron 4 of 19)	intron (NM_177088, intron 4 of 19)	9703	NM_001166685	320162	Mm.30524	NM_177088	ENSMUSG00000018372	Cep95	4732496G21Rik|AI118346|AI448335|Ccdc45|D330027A14Rik|F630025I20Rik	centrosomal protein 95	protein-coding
unique_peak1-5547-17-8-1.04837133676273-1.30305656033811	chr5	142912048	142912897	+	0	NA	intron (NM_199068, intron 2 of 8)	B2_Mm2|SINE|B2	-27413	NM_172725	231855	Mm.78250	NM_172725	ENSMUSG00000039623	Ap5z1	C330006K01Rik	adaptor-related protein complex 5, zeta 1 subunit	protein-coding
unique_peak2-33105-2-6--1.72480917832092-1.26211192963361	chr10	80928776	80929226	+	0	NA	intron (NM_176954, intron 8 of 11)	intron (NM_176954, intron 8 of 11)	16453	NM_176954	319586	Mm.152689	NM_176954	ENSMUSG00000034818	Celf5	4930565A21Rik|Brunol5	CUGBP, Elav-like family member 5	protein-coding
common_peak2-24171-83-117-0.0315795757442849-0.315628816833004	chr16	45843297	45845141	+	0	NA	intron (NM_153412, intron 1 of 17)	intron (NM_153412, intron 1 of 17)	272	NM_153412	208177	Mm.211477	NM_153412	ENSMUSG00000033149	Phldb2	AV253284|C820004H04Rik|LL5b|LL5beta	pleckstrin homology-like domain, family B, member 2	protein-coding
common_peak1-14481-49-74--0.222534867470697-0.458521068983781	chr3	144719323	144720500	+	0	NA	Intergenic	L1Md_T|LINE|L1	-24171	NM_017474	23844	Mm.33483	NM_017474	ENSMUSG00000028255	Clca3	Clca1|Clca2|gob-5|gob5	chloride channel calcium activated 3	protein-coding
unique_peak1-2672-86-28-2.11765479890478-14.9485718814968	chr16	57391028	57391784	+	0	NA	intron (NM_001040397, intron 1 of 4)	LSU-rRNA_Hsa|rRNA|rRNA	38016	NM_001040397	78749	Mm.328360	NM_001040397	ENSMUSG00000043336	Filip1l	4631422O05Rik|Doc1	filamin A interacting protein 1-like	protein-coding
unique_peak2-37288-3-6--1.22133801201688-1.08602067057793	chr4	118237284	118237679	+	0	NA	intron (NM_026789, intron 20 of 21)	intron (NM_026789, intron 20 of 21)	-21150	NM_172383	230678	Mm.23639	NM_172383	ENSMUSG00000050854	Tmem125	6330530A05Rik|AV223516	transmembrane protein 125	protein-coding
common_peak1-17168-21-13-0.762134343208631-1.0220094258199	chr6	120153418	120154542	+	0	NA	intron (NM_198884, intron 19 of 19)	intron (NM_198884, intron 19 of 19)	90597	NM_198884	330406	Mm.321840	NM_198884	ENSMUSG00000041372	B4galnt3	AB114826|B4GalNAcT3|C330047A21	beta-1,4-N-acetyl-galactosaminyl transferase 3	protein-coding
unique_peak1-5173-9-3-1.18961340640422-1.57096726280955	chr5	29706396	29706920	+	0	NA	Intergenic	RLTR41|LTR|ERV1	-1728	NM_020295	56873	Mm.41572	NM_020295	ENSMUSG00000010721	Lmbr1	1110048D14Rik|AU017641	limb region 1	protein-coding
unique_peak1-3189-11-8-0.338768582809301-1.14218153353838	chr18	50000292	50000799	+	0	NA	intron (NM_001081371, intron 2 of 42)	B3|SINE|B2	7894	NM_001081371	240283	Mm.257790	NM_001081371	ENSMUSG00000037416	Dmxl1	C630007L23Rik|D030030C22	Dmx-like 1	protein-coding
unique_peak2-34711-0-6--3.64748585253182-1.56314192529759	chr15	34205395	34205743	+	0	NA	intron (NM_033521, intron 4 of 6)	intron (NM_033521, intron 4 of 6)	-30867	NM_016762	17181	Mm.396856	NM_016762	ENSMUSG00000022324	Matn2	Crtm2|matrilin-2	matrilin 2	protein-coding
common_peak2-25501-10-8-0.186490343566457-1.078512453669	chr19	5432588	5433102	+	0	NA	Intergenic	Intergenic	7701	NM_001256515	107242	Mm.329658	NM_134149	ENSMUSG00000047423	AI837181	Bles03|N28173	expressed sequence AI837181	protein-coding
common_peak2-22587-31-30-0.271042360426248-0.460129356264044	chr13	69611482	69612554	+	0	NA	Intergenic	Intergenic	60724	NM_198600	210106	Mm.315959	NM_198600	ENSMUSG00000034575	Papd7	LAK-1|POLK|Pols|TRF4|TRF4-1	PAP associated domain containing 7	protein-coding
common_peak2-25380-22-35--0.522640896354908-0.664636481544818	chr18	84684917	84685784	+	0	NA	intron (NM_001033341, intron 3 of 8)	intron (NM_001033341, intron 3 of 8)	73546	NM_001033341	240476	Mm.329575	NM_001033341	ENSMUSG00000048410	Zfp407	6430585N13Rik|Gm333|Gm334|Gm948|ZNF407	zinc finger protein 407	protein-coding
unique_peak2-34199-7-8--0.370834171144123-1.00793137938329	chr13	40859193	40859545	+	0	NA	Intergenic	(TC)n|Simple_repeat|Simple_repeat	-30177	NM_011547	21418	Mm.85544	NM_011547	ENSMUSG00000021359	Tfap2a	AP-2|AP2alpha|Ap2|Ap2tf|Tcfap2a	transcription factor AP-2, alpha	protein-coding
unique_peak2-33831-2-11--2.50241675698448-2.32232533660526	chr12	8875601	8876150	+	0	NA	Intergenic	Intergenic	-52238	NM_008640	17775	Mm.30071	NM_008640	ENSMUSG00000020585	Laptm4a	AA286466|LAPTM4|MTP|Mtrp|mKIAA0108	lysosomal-associated protein transmembrane 4A	protein-coding
common_peak1-19268-23-28--0.136213490618491-0.317118655902079	chr9	114400895	114401640	+	0	NA	exon (NM_009916, exon 2 of 2)	exon (NM_009916, exon 2 of 2)	4395	NM_009916	12773	Mm.1337	NM_009916	ENSMUSG00000047898	Ccr4	C-C CKR-4|CHEMR1|Cmkbr4|LESTR|Sdf1r	chemokine (C-C motif) receptor 4	protein-coding
common_peak1-11449-8-16--1.08224042330277-0.891319708951328	chr15	101241645	101242098	+	0	NA	promoter-TSS (NM_033073)	promoter-TSS (NM_033073)	-963	NM_033073	110310	Mm.486285	NM_033073		Krt7	D15Wsu77e|K7|Krt2-7	keratin 7	protein-coding
common_peak2-30484-15-14-0.105274154947137-0.330004445983672	chr7	55638310	55639101	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-5191	NM_207539	404240	Mm.357942	NM_207539	ENSMUSG00000050870	Mrgprb8	MrgB8	MAS-related GPR, member B8	protein-coding
common_peak1-12762-23-24-0.0779113147343562-0.318406410381916	chr18	60648617	60649793	+	0	NA	intron (NM_134133, intron 1 of 1)	RLTR17|LTR|ERVK	12432	NM_134133	106878	Mm.273197	NM_134133	ENSMUSG00000038059	Smim3	2010002N04Rik|AI195350|AW561905|Nid67|cI-41	small integral membrane protein 3	protein-coding
common_peak1-8636-10-10--0.103016273628528-0.301029995663987	chr10	121802168	121802731	+	0	NA	Intergenic	L1Md_A|LINE|L1	-83106	NM_016847	54140	Mm.4351	NM_016847	ENSMUSG00000020123	Avpr1a	AVPR|Avpr1|V1a|V1aR	arginine vasopressin receptor 1A	protein-coding
unique_peak1-1924-8-0-3.00522241794757-2.70926996097583	chr14	76575978	76576471	+	0	NA	Intergenic	Intergenic	65526	NM_013745	27275	Mm.21138	NM_013745	ENSMUSG00000022009	Nufip1	Nufip	nuclear fragile X mental retardation protein interacting protein 1	protein-coding
unique_peak1-764-12-1-2.64877598508764-3.36932189928148	chr10	121510067	121510682	+	0	NA	Intergenic	Lx9|LINE|L1	6561	NR_004052	668272	Mm.236764	NR_004052		Gm9079	-	transmembrane emp24 domain trafficking protein 2 pseudogene	pseudo
unique_peak2-34838-4-7--1.02346051385325-1.09384600808989	chr15	75850244	75850683	+	0	NA	Intergenic	Intergenic	-5697	NM_134087	105732	Mm.267178	NM_134087	ENSMUSG00000046761	Fam83h	AA409316	family with sequence similarity 83, member H	protein-coding
unique_peak1-6245-21-6-1.76213434320863-2.81226952737395	chr7	19300789	19301498	+	0	NA	Intergenic	MTD|LTR|MaLR	-2296	NM_001004152	243862	Mm.389833	NM_001004152	ENSMUSG00000044903	Psg22	AA408604|cea9	pregnancy-specific glycoprotein 22	protein-coding
common_peak2-30995-14-8-0.729291158915332-0.771068449301682	chr8	8330536	8330961	+	0	NA	Intergenic	L1_Mus4|LINE|L1	330025	NM_010111	13642	Mm.209813	NM_010111	ENSMUSG00000001300	Efnb2	ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1	ephrin B2	protein-coding
common_peak1-8593-9-9--0.132314688483142-1.03275496310833	chr10	108446958	108447434	+	0	NA	intron (NM_001252341, intron 1 of 11)	intron (NM_001252341, intron 1 of 11)	835	NM_009306	20979	Mm.289702	NM_009306	ENSMUSG00000035864	Syt1	AW124717|G630098F17Rik|SytI	synaptotagmin I	protein-coding
unique_peak2-36126-7-7--0.200909169701811-0.97990265578305	chr2	6098684	6099114	+	0	NA	Intergenic	Intergenic	-15398	NR_040333	320132	Mm.445891	NR_040333	ENSMUSG00000087125	A230108P19Rik	-	RIKEN cDNA A230108P19 gene	ncRNA
unique_peak1-4685-6-2-0.980435609659146-1.26211192963361	chr3	95777440	95777956	+	0	NA	Intergenic	Intergenic	-11735	NR_045872	668224	Mm.357766	NR_045872		Gm9054	EG668224	predicted gene 9054	ncRNA
common_peak1-11120-43-35-0.612638184081391-1.27423323032613	chr15	64059704	64060973	+	0	NA	intron (NM_001276467, intron 3 of 29)	intron (NM_001276467, intron 3 of 29)	83897	NM_001276462	13196	Mm.277236	NM_010026	ENSMUSG00000022377	Asap1	AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19	ArfGAP with SH3 domain, ankyrin repeat and PH domain1	protein-coding
common_peak2-25848-14-21--0.560215458279653-0.519193887192484	chr19	41981343	41982197	+	0	NA	Intergenic	Intergenic	-4591	NM_023418	18648	Mm.391589	NM_023418	ENSMUSG00000011752	Pgam1	2310050F24Rik|Pgam-1	phosphoglycerate mutase 1	protein-coding
common_peak2-24455-16-38--1.16713857659419-2.08714016986896	chr17	23699350	23700173	+	0	NA	intron (NM_001033496, intron 1 of 5)	B1_Mus1|SINE|Alu	1432	NM_001033496	449521	Mm.268582	NM_001033496	ENSMUSG00000071256	Zfp213	BC038178|D17Ertd197e	zinc finger protein 213	protein-coding
common_peak2-20095-43-47-0.197600684802547-0.437419278836636	chr1	156938852	156940108	+	0	NA	Intergenic	Intergenic	7286	NM_010500	15939	Mm.12246	NM_010500	ENSMUSG00000056708	Ier5	-	immediate early response 5	protein-coding
common_peak1-10459-66-30-1.56428735403897-7.47290788173139	chr13	109242295	109243758	+	0	NA	Intergenic	B2_Mm2|SINE|B2	136495	NM_178683	218581	Mm.32318	NM_178683	ENSMUSG00000021697	Depdc1b	9830132O03|AW260467|XTP1	DEP domain containing 1B	protein-coding
common_peak2-20701-11-9-0.186765489364251-0.344532117358383	chr10	93341269	93341672	+	0	NA	intron (NM_019648, intron 5 of 11)	intron (NM_019648, intron 5 of 11)	12477	NM_019648	56307	Mm.289329	NM_019648	ENSMUSG00000036112	Metap2	4930584B20Rik|A930035J23Rik|AI047573|AL024412|AU014659|Amp2|Mnpep|p67|p67eIF2	methionine aminopeptidase 2	protein-coding
common_peak2-20567-7-5-0.214128329577033-1.01466476204226	chr10	75932277	75932584	+	0	NA	promoter-TSS (NM_172550)	promoter-TSS (NM_172550)	-571	NM_172550	216119	Mm.344778	NM_172550	ENSMUSG00000033126	Ybey	1110068N23Rik|A130042E20Rik|C21orf57|ORF57|ORF66	ybeY metallopeptidase	protein-coding
common_peak1-10005-49-28-1.14830282789761-3.44325269351006	chr13	4771940	4773132	+	0	NA	Intergenic	Intergenic	-164126	NM_018859	56043	Mm.251908	NM_018859	ENSMUSG00000045410	Akr1e1	1810061I10Rik|Akr1e2	aldo-keto reductase family 1, member E1	protein-coding
common_peak1-8423-11-7-0.508693584251613-1.21681515183528	chr10	76257633	76258204	+	0	NA	intron (NM_021568, intron 7 of 15)	intron (NM_021568, intron 7 of 15)	-69129	NM_009933	12833	Mm.2509	NM_009933	ENSMUSG00000001119	Col6a1	AI747156|Col6a-1	collagen, type VI, alpha 1	protein-coding
unique_peak1-1774-9-2-1.60465090568306-1.87199725847353	chr14	25345955	25346390	+	0	NA	Intergenic	Intergenic	36269	NM_011297	20088	Mm.16775	NM_011297	ENSMUSG00000025290	Rps24	-	ribosomal protein S24	protein-coding
common_peak2-26659-18-34--0.816363865716615-1.09826982379496	chr2	121170677	121171635	+	0	NA	intron (NM_178795, intron 9 of 29)	ID_B1|SINE|B4	5593	NM_178795	327655	Mm.386076	NM_178795	ENSMUSG00000033526	Ppip5k1	B430315C20Rik|Hisppd2a|mKIAA0377	diphosphoinositol pentakisphosphate kinase 1	protein-coding
common_peak1-14215-40-40-0.301423678133014-0.590471533980013	chr2	151494109	151495071	+	0	NA	promoter-TSS (NM_001276400)	promoter-TSS (NM_001276400)	-321	NM_001276400	668929	Mm.473683	NM_001114677	ENSMUSG00000074704	Rad21l	Gm14160|MeiRAD21L|Rad21l1	RAD21-like (S. pombe)	protein-coding
common_peak2-31298-25-48--0.752859938770102-1.32967515660734	chr8	73352149	73353597	+	0	NA	Intergenic	PB1D7|SINE|Alu	10746	NM_027560	70807	Mm.24215	NM_027560	ENSMUSG00000002910	Arrdc2	4632416I05Rik|Ilad1	arrestin domain containing 2	protein-coding
common_peak2-21426-23-39--0.600160590378282-0.869438253311888	chr11	85140073	85140792	+	0	NA	exon (NM_016910, exon 2 of 6)	exon (NM_016910, exon 2 of 6)	15676	NM_016910	53892	Mm.45609	NM_016910	ENSMUSG00000020525	Ppm1d	AV338790|Wip1	protein phosphatase 1D magnesium-dependent, delta isoform	protein-coding
common_peak1-9145-21-19-0.247561170378873-0.427564438475253	chr11	76216886	76217727	+	0	NA	Intergenic	Intergenic	-3121	NM_001291161	56322	Mm.18803	NM_019818	ENSMUSG00000020843	Timm22	Tim22	translocase of inner mitochondrial membrane 22	protein-coding
common_peak2-20821-43-56--0.0503268286410385-0.302986303577564	chr10	128322193	128323400	+	0	NA	intron (NM_010272, intron 2 of 2)	intron (NM_010272, intron 2 of 2)	5978	NM_010272	14561	Mm.299218	NM_010272		Gdf11	BMP-11|Bmp11	growth differentiation factor 11	protein-coding
common_peak2-23786-7-9--0.522837264589173-1.05908390183068	chr15	99505920	99506276	+	0	NA	intron (NM_009597, intron 3 of 11)	intron (NM_009597, intron 3 of 11)	4949	NM_009597	11419	Mm.440107	NM_009597	ENSMUSG00000023017	Asic1	AI843610|ASIC|ASIC1a|Accn2|B530003N02Rik|BNaC2	acid-sensing (proton-gated) ion channel 1	protein-coding
unique_peak1-6102-7-2-1.21412832957703-1.45399745587252	chr6	125450554	125451070	+	0	NA	Intergenic	Intergenic	-6039	NM_007657	12527	Mm.210676	NM_007657	ENSMUSG00000030342	Cd9	Tspan29	CD9 antigen	protein-coding
unique_peak1-332-11-2-1.92373108353046-2.32232533660526	chr1	133235895	133236449	+	0	NA	intron (NM_001081011, intron 10 of 22)	intron (NM_001081011, intron 10 of 22)	-60032	NM_019777	56489	Mm.386783	NM_019777	ENSMUSG00000042349	Ikbke	AW558201|IKK-i|IKKepsilon|Ikki	inhibitor of kappaB kinase epsilon	protein-coding
common_peak1-15796-41-44-0.209295608518985-0.445962842009412	chr4	155943576	155944751	+	0	NA	Intergenic	Intergenic	-335197	NM_198305	231003	Mm.423038	NM_198305	ENSMUSG00000078484	Klhl17	AL022703|BC058738	kelch-like 17	protein-coding
unique_peak1-4833-10-4-1.03448725012141-1.5150158574804	chr3	146856142	146856654	+	0	NA	Intergenic	Intergenic	341067	NM_027594	70892	Mm.187793	NM_027594	ENSMUSG00000036745	Ttll7	1110049N09Rik|4921517B04Rik|C630030B20|Ttll7s	tubulin tyrosine ligase-like family, member 7	protein-coding
unique_peak1-5508-15-6-1.20480982849805-1.32521814697968	chr5	136530918	136531714	+	0	NA	Intergenic	ORR1E|LTR|MaLR	-1821	NM_027158	69665	Mm.75713	NM_027158	ENSMUSG00000006143	Upk3bl	2310043J07Rik	uroplakin 3B-like	protein-coding
unique_peak1-7413-7-3-0.799090830298189-1.23214870625617	chrX	139783004	139783508	+	0	NA	intron (NM_031258, intron 4 of 8)	L2c|LINE|L2	45549	NM_031258	83453	Mm.157697	NM_031258	ENSMUSG00000031283	Chrdl1	CHL|CHL1|Nrln1|VOPT	chordin-like 1	protein-coding
common_peak1-8894-46-59--0.00889465235971709-0.302854783871693	chr11	49045633	49047668	+	0	NA	Intergenic	Intergenic	-11043	NM_010794	17308	Mm.196933	NM_010794	ENSMUSG00000020346	Mgat1	Mgat-1	mannoside acetylglucosaminyltransferase 1	protein-coding
common_peak1-8417-9-17--0.980311595038092-0.844317084070804	chr10	75070413	75070934	+	0	NA	intron (NM_011820, intron 6 of 11)	RLTR20B3|LTR|ERVK	18547	NM_011820	23887	Mm.257927	NM_011820	ENSMUSG00000006344	Ggt5	AI551243|GGL|GGT-REL|Ggtla1	gamma-glutamyltransferase 5	protein-coding
common_peak1-15946-6-7--0.434601889619698-0.97990265578305	chr5	29710507	29710867	+	0	NA	Intergenic	RMER19B|LTR|ERVK	-5757	NM_020295	56873	Mm.41572	NM_020295	ENSMUSG00000010721	Lmbr1	1110048D14Rik|AU017641	limb region 1	protein-coding
common_peak1-14237-19-12-0.702247608520594-0.840839978588874	chr2	153258185	153259119	+	0	NA	intron (NM_001001986, intron 2 of 7)	intron (NM_001001986, intron 2 of 7)	11563	NM_001001986	329540	Mm.50600	NM_001001986	ENSMUSG00000061411	Nol4l	4931410H15|8430427H17Rik|AI429157|Gm1636	nucleolar protein 4-like	protein-coding
common_peak1-16266-13-15--0.221527969362231-0.308519316180257	chr5	107987171	107987710	+	0	NA	intron (NM_133248, intron 14 of 18)	intron (NM_133248, intron 14 of 18)	23710	NM_175241	76421	Mm.67037	NM_175241	ENSMUSG00000089798	1700028K03Rik	-	RIKEN cDNA 1700028K03 gene	protein-coding
common_peak2-31405-16-44--1.37358945406161-2.98828922433295	chr8	91800707	91802076	+	0	NA	Intergenic	B3|SINE|B2	-233330	NM_021390	58198	Mm.214361	NM_021390	ENSMUSG00000031665	Sall1	Msal-3	sal-like 1 (Drosophila)	protein-coding
common_peak1-7437-49-41-0.613966400246423-1.40395959851644	chr1	64616780	64618808	+	0	NA	intron (NM_133828, intron 5 of 7)	intron (NM_133828, intron 5 of 7)	38416	NM_001037726	12912	Mm.422634	NM_009952	ENSMUSG00000025958	Creb1	2310001E10Rik|3526402H21Rik|AV083133|Creb|Creb-1	cAMP responsive element binding protein 1	protein-coding
unique_peak1-6025-12-5-1.06381348436648-1.78669045979184	chr6	113053860	113054478	+	0	NA	intron (NM_028385, intron 1 of 21)	intron (NM_028385, intron 1 of 21)	26536	NM_028385	72895	Mm.367159	NM_028385	ENSMUSG00000034269	Setd5	2900045N06Rik|C330007C20|C85544|mKIAA1757	SET domain containing 5	protein-coding
common_peak2-30823-6-8--0.60452689106201-1.03789460276074	chr7	130546348	130546808	+	0	NA	intron (NM_025304, intron 4 of 10)	intron (NM_025304, intron 4 of 10)	25082	NM_025304	30949	Mm.260527	NM_025304	ENSMUSG00000030763	Lcmt1	AL033290|LCMT-1|Lcmt	leucine carboxyl methyltransferase 1	protein-coding
unique_peak2-39535-11-19--0.813234510635749-0.769930178837768	chr9	66989273	66990342	+	0	NA	intron (NR_045748, intron 1 of 2)	intron (NR_045748, intron 1 of 2)	8439	NR_045748	100502636	Mm.412607	NR_045748		Gm19299	-	predicted gene, 19299	ncRNA
common_peak1-18122-89-137--0.0735577019521667-0.33020146522836	chr8	4677245	4679231	+	0	NA	Intergenic	CpG	65068	NM_145591	233987	Mm.102799	NM_145591		Zfp958	-	zinc finger protein 958	protein-coding
common_peak2-32191-15-21--0.447266868081641-0.448200956659578	chr9	118506071	118506740	+	0	NA	Intergenic	MLT1B|LTR|MaLR	-9422	NM_133721	104099	Mm.335520	NM_133721	ENSMUSG00000039115	Itga9	(alpha)9|2610002H11Rik|6720458D17Rik|AI461869|D130073C02|D9Ertd428e	integrin alpha 9	protein-coding
unique_peak2-34812-3-7--1.41398308995928-1.23214870625617	chr15	74676834	74677189	+	0	NA	Intergenic	Intergenic	-4938	NM_001033229	110115	Mm.322606	NM_001033229	ENSMUSG00000075604	Cyp11b1	AA389061|CPN1|Cyp11b|Cyp11b-1|FHI	cytochrome P450, family 11, subfamily b, polypeptide 1	protein-coding
common_peak2-21593-80-99-0.206719576594628-0.561037476851935	chr11	98775600	98777394	+	0	NA	exon (NM_011799, exon 8 of 12)	exon (NM_011799, exon 8 of 12)	7032	NM_011799	23834	Mm.20912	NM_011799	ENSMUSG00000017499	Cdc6	CDC18L	cell division cycle 6	protein-coding
unique_peak2-36195-11-26--1.24619391791185-1.66030262873422	chr2	32394879	32395955	+	0	NA	intron (NM_153560, intron 1 of 10)	intron (NM_153560, intron 1 of 10)	4538	NM_153560	98952	Mm.4065	NM_153560	ENSMUSG00000039157	Fam102a	AI426465|C230093N12Rik|Eeig1	family with sequence similarity 102, member A	protein-coding
common_peak2-30234-8-14--0.901668177660948-0.660903317613906	chr7	4684558	4685016	+	0	NA	Intergenic	Intergenic	-6942	NM_146177	232811	Mm.247844	NM_146177	ENSMUSG00000059851	Suv420h2	BC024816|KMT5C|Suv4-20h2	suppressor of variegation 4-20 homolog 2 (Drosophila)	protein-coding
common_peak2-27455-15-22--0.511397205501357-0.50761186003982	chr3	90475978	90476720	+	0	NA	Intergenic	MTD-int|LTR|MaLR	3356	NM_013650	20201	Mm.21567	NM_013650	ENSMUSG00000056054	S100a8	60B8Ag|AI323541|B8Ag|CFAg|CP-10|Caga|MRP8|p8	S100 calcium binding protein A8 (calgranulin A)	protein-coding
unique_peak1-4162-10-2-1.77145284428761-2.09384600808989	chr2	104717277	104717755	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-8965	NM_177600	211936	Mm.416538	NM_177600	ENSMUSG00000045106	Ccdc73	2210415I11Rik|4931417A20|AV080665|BC095976	coiled-coil domain containing 73	protein-coding
common_peak1-15188-56-30-1.28139951505237-4.62753553400588	chr3	153911722	153913351	+	0	NA	intron (NM_001081263, intron 10 of 21)	intron (NM_001081263, intron 10 of 21)	80988	NM_010713	16875	Mm.15530	NM_010713	ENSMUSG00000096225	Lhx8	L3|Lhx7	LIM homeobox protein 8	protein-coding
common_peak1-15190-40-59--0.247914912857421-0.427481819178421	chr3	155092695	155094223	+	0	NA	Intergenic	Intergenic	337061	NM_028938	74435	Mm.195711	NM_028938	ENSMUSG00000028182	Lrriq3	4930438B07Rik|4930511J15Rik|4933403H06Rik|BB020367|Lrrc44	leucine-rich repeats and IQ motif containing 3	protein-coding
common_peak1-13789-13-8-0.608547029195456-0.660903317613904	chr2	38545521	38546173	+	0	NA	Intergenic	Intergenic	24215	NM_139051	26423	Mm.31387	NM_139051	ENSMUSG00000026751	Nr5a1	Ad4BP|ELP|ELP-3|Ftz-F1|Ftzf1|SF-1|SF1	nuclear receptor subfamily 5, group A, member 1	protein-coding
common_peak2-21648-13-20--0.613845392140992-0.532159081577619	chr11	102184820	102185385	+	0	NA	Intergenic	B4A|SINE|B4	-4692	NM_011551	21429	Mm.2845	NM_011551	ENSMUSG00000020923	Ubtf	A930005G04Rik|NOR-90|Tcfubf|UBF|UBF1	upstream binding transcription factor, RNA polymerase I	protein-coding
common_peak1-14190-10-21--1.10301627362853-1.16735254179725	chr2	145903151	145903779	+	0	NA	Intergenic	Intergenic	142945	NM_175280	78774	Mm.136347	NM_175280	ENSMUSG00000037143	Cfap61	4930529M08Rik|BB178539|BC024760	cilia and flagella associated protein 61	protein-coding
unique_peak1-2851-11-2-1.92373108353046-2.32232533660526	chr17	31823237	31823946	+	0	NA	Intergenic	Intergenic	8715	NM_001278570	12954	Mm.1228	NM_013501	ENSMUSG00000024041	Cryaa	Acry-1|Crya-1|Crya1|DAcry-1|lop18	crystallin, alpha A	protein-coding
unique_peak2-34257-6-10--0.894033508256995-1.21398586181642	chr13	63072739	63073248	+	0	NA	intron (NM_001289926, intron 1 of 15)	intron (NM_001289926, intron 1 of 15)	6740	NM_001289924	72061	Mm.188105	NM_028079	ENSMUSG00000021458	2010111I01Rik	2300006M17Rik|AP-O|Aopep	RIKEN cDNA 2010111I01 gene	protein-coding
common_peak1-14479-48-62--0.00635277226510222-0.302767192121929	chr3	138526133	138527721	+	0	NA	intron (NR_121195, intron 1 of 7)	Lx8|LINE|L1	121755	NM_019571	56224	Mm.31927	NM_019571	ENSMUSG00000028152	Tspan5	2810455A09Rik|4930505M03Rik|NET-4|Tm4sf9	tetraspanin 5	protein-coding
common_peak1-17051-18-7-1.31291915122835-1.71830443967823	chr6	97208380	97209137	+	0	NA	Intergenic	RMER30|DNA|MER1_type	-5984	NM_001081157	320502	Mm.68163	NM_001081157	ENSMUSG00000044086	Lmod3	5430424A14Rik	leiomodin 3 (fetal)	protein-coding
unique_peak2-33833-6-8--0.60452689106201-1.03789460276074	chr12	8876954	8877402	+	0	NA	Intergenic	Intergenic	-50935	NM_008640	17775	Mm.30071	NM_008640	ENSMUSG00000020585	Laptm4a	AA286466|LAPTM4|MTP|Mtrp|mKIAA0108	lysosomal-associated protein transmembrane 4A	protein-coding
common_peak1-10192-27-66--1.07454323956254-2.91651320486995	chr13	44729600	44730599	+	0	NA	Intergenic	Intergenic	-96044	NM_021878	16468	Mm.25059	NM_021878	ENSMUSG00000038518	Jarid2	Jmj|jumonji	jumonji, AT rich interactive domain 2	protein-coding
common_peak1-9694-16-11-0.533301141546906-0.58239619684445	chr12	17739287	17740131	+	0	NA	intron (NM_016677, intron 1 of 3)	intron (NM_016677, intron 1 of 3)	42089	NM_016677	53602	Mm.313619	NM_016677	ENSMUSG00000071379	Hpcal1	NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3	hippocalcin-like 1	protein-coding
common_peak2-27822-17-8-1.04837133676273-1.30305656033811	chr3	145758747	145759194	+	0	NA	intron (NM_172864, intron 4 of 22)	RLTR11A|LTR|ERVK	12030	NM_172864	242253	Mm.235040	NM_172864	ENSMUSG00000043020	Wdr63	4931433A13Rik	WD repeat domain 63	protein-coding
common_peak1-10810-10-19--0.965512749878593-0.917676348953458	chr14	79451941	79452432	+	0	NA	intron (NM_027906, intron 21 of 44)	RLTR11A2|LTR|ERVK	194988	NM_001033215	105590	Mm.486536	NM_001033215	ENSMUSG00000071262	Zfp957	AU017455	zinc finger protein 957	protein-coding
unique_peak2-33583-6-25--2.13504160776079-3.01815507148775	chr11	86807034	86807953	+	0	NA	promoter-TSS (NM_001005341)	promoter-TSS (NM_001005341)	-229	NM_001005341	77864	Mm.191894	NM_001005341	ENSMUSG00000018427	Ypel2	6430570G24|E130113K08Rik	yippee-like 2 (Drosophila)	protein-coding
common_peak2-25632-15-15-0.0121647505556561-0.30803596071496	chr19	9081899	9082678	+	0	NA	exon (NM_009643, exon 5 of 5)	exon (NM_009643, exon 5 of 5)	18514	NM_001286518	66395	Mm.203866	NM_009643	ENSMUSG00000069833	Ahnak	DY6	AHNAK nucleoprotein (desmoyokin)	protein-coding
common_peak2-30470-1-7--2.62705701021674-1.80617997398389	chr7	47041263	47041611	+	0	NA	Intergenic	B4A|SINE|B4	268301	NM_001004139	70227	Mm.333800	NM_001004139	ENSMUSG00000068959	Zfp619	3000002G13Rik	zinc finger protein 619	protein-coding
common_peak2-24357-50-20-1.64862289370019-5.9332424748625	chr17	6468096	6468965	+	0	NA	Intergenic	L1Md_F3|LINE|L1	-18388	NR_033520	547127	Mm.297552	NM_001045538		Tmem181b-ps	Tmem181b	transmembrane protein 181B, pseudogene	pseudo
common_peak1-14803-55-47-0.619657370431546-1.62037624578621	chr3	90212726	90214159	+	0	NA	intron (NM_178876, intron 8 of 30)	intron (NM_178876, intron 8 of 30)	-19593	NM_011988	26568	Mm.45519	NM_011988	ENSMUSG00000027932	Slc27a3	Acsvl3|FATP3|Vlcs-3	solute carrier family 27 (fatty acid transporter), member 3	protein-coding
unique_peak2-32493-6-8--0.60452689106201-1.03789460276074	chr1	43827283	43827725	+	0	NA	intron (NM_026430, intron 9 of 14)	intron (NM_026430, intron 9 of 14)	40057	NM_024283	78896	Mm.50109	NM_024283	ENSMUSG00000026051	1500015O10Rik	Ecrg4	RIKEN cDNA 1500015O10 gene	protein-coding
common_peak2-27664-14-14--0.00767443525087419-0.308519316180257	chr3	108881752	108882358	+	0	NA	Intergenic	B3A|SINE|B2	-1362	NM_029054	74686	Mm.307948	NM_029054	ENSMUSG00000027880	Slc25a54	4930443G12Rik|SCaMC-1like	solute carrier family 25, member 54	protein-coding
common_peak2-21028-10-14--0.550475250599749-0.446472590016315	chr11	32267254	32267721	+	0	NA	intron (NM_177364, intron 1 of 12)	intron (NM_177364, intron 1 of 12)	19676	NM_177364	268396	Mm.227616	NM_177364	ENSMUSG00000040711	Sh3pxd2b	G431001E03Rik|TSK4|fad49	SH3 and PX domains 2B	protein-coding
common_peak1-9219-11-11--0.0762689164695427-0.301029995663976	chr11	83788891	83789437	+	0	NA	intron (NM_194341, intron 2 of 19)	RMER30|DNA|MER1_type	11231	NM_194341	217030	Mm.82680	NM_194341	ENSMUSG00000034940	Synrg	Ap1gbp1|SYNG	synergin, gamma	protein-coding
unique_peak1-1332-8-4-0.683294323060208-1.21878474469819	chr12	8780657	8781170	+	0	NA	intron (NM_011519, intron 1 of 4)	intron (NM_011519, intron 1 of 4)	2711	NM_011519	20969	Mm.2580	NM_011519	ENSMUSG00000020592	Sdc1	AA408134|AA409076|CD138|Sstn|Synd|Synd1|syn-1	syndecan 1	protein-coding
common_peak1-16906-41-49-0.0572925150739358-0.320382596085891	chr6	72389308	72390770	+	0	NA	promoter-TSS (NM_145569)	promoter-TSS (NM_145569)	-487	NM_145569	232087	Mm.29815	NM_145569	ENSMUSG00000053907	Mat2a	D630045P18Rik	methionine adenosyltransferase II, alpha	protein-coding
common_peak2-25330-9-8-0.0196884049619079-1.03275496310833	chr18	76057208	76057693	+	0	NA	intron (NM_145356, intron 1 of 4)	intron (NM_145356, intron 1 of 4)	77618	NM_145356	207259	Mm.159332	NM_145356	ENSMUSG00000044646	Zbtb7c	B230208J24Rik|Kr-pok|Zbtb36	zinc finger and BTB domain containing 7C	protein-coding
common_peak2-28480-13-12-0.0780323124966764-0.334470287753051	chr4	155489092	155489510	+	0	NA	intron (NM_177205, intron 2 of 9)	B3|SINE|B2	5194	NM_177205	230996	Mm.318925	NM_145557	ENSMUSG00000059939	9430015G10Rik	-	RIKEN cDNA 9430015G10 gene	protein-coding
common_peak1-9989-51-24-1.43106763582785-4.89407448190067	chr13	48840502	48842398	+	0	NA	Intergenic	RMER17C|LTR|ERVK	83045	NM_007526	12022	Mm.42241	NM_007526	ENSMUSG00000021381	Barx1	-	BarH-like homeobox 1	protein-coding
unique_peak1-1607-10-0-3.35641534500877-3.31132995230379	chr13	38087656	38088327	+	0	NA	Intergenic	MTB|LTR|MaLR	-1932	NM_025965	107513	Mm.426670	NM_025965	ENSMUSG00000021427	Ssr1	2510001K09Rik|6330400D04|AI159733|AI452176|SSR|TRAPA	signal sequence receptor, alpha	protein-coding
common_peak2-23338-44-49-0.178036644793811-0.432262512709542	chr15	38456670	38458324	+	0	NA	Intergenic	ORR1D2-int|LTR|MaLR	-8476	NM_018745	54375	Mm.250214	NM_018745	ENSMUSG00000037458	Azin1	1700085L02Rik|AI414949|Oazi|Oazin	antizyme inhibitor 1	protein-coding
common_peak1-17131-13-14--0.12841856497075-0.301029995663977	chr6	115522003	115522619	+	0	NA	intron (NM_199033, intron 8 of 11)	intron (NM_199033, intron 8 of 11)	20283	NM_001101431	70291	Mm.133694	NM_001101431		Mkrn2os	2510049J12Rik	makorin, ring finger protein 2, opposite strand	protein-coding
common_peak1-9762-38-80--0.768397343586094-2.0567716791101	chr12	54862023	54863125	+	0	NA	intron (NM_013780, intron 4 of 11)	intron (NM_013780, intron 4 of 11)	442287	NM_028133	112407	Mm.133037	NM_028133	ENSMUSG00000035105	Egln3	2610021G09Rik|AI505553|AI648162|Hif-p4h-3|Phd3|SM-20	egl-9 family hypoxia-inducible factor 3	protein-coding
common_peak2-28375-10-14--0.550475250599749-0.446472590016315	chr4	137954471	137955126	+	0	NA	Intergenic	B2_Mm1a|SINE|B2	-2425	NM_001081672	625638	Mm.379091	NM_001081672	ENSMUSG00000078235	Fam43b	OTTMUSG00000009974	family with sequence similarity 43, member B	protein-coding
common_peak1-17287-27-53--0.763341551268232-1.43939133646632	chr6	135362921	135363847	+	0	NA	Intergenic	Intergenic	45873	NM_001288627	13730	Mm.182785	NM_010128	ENSMUSG00000030208	Emp1	I-8-09|TMP	epithelial membrane protein 1	protein-coding
common_peak2-25822-25-32--0.182544214013348-0.333081040816759	chr19	38480878	38481697	+	0	NA	Intergenic	Intergenic	10817	NM_175507	240660	Mm.262085	NM_175507	ENSMUSG00000044026	Slc35g1	AA590464|D330039I19Rik|Tmem20	solute carrier family 35, member G1	protein-coding
common_peak2-22730-8-6-0.197867495889966-1.03789460276074	chr13	108228608	108229019	+	0	NA	Intergenic	Intergenic	-31089	NR_045083	105120	Mm.417700	NR_045083		AI197445	-	expressed sequence AI197445	ncRNA
common_peak1-10383-11-16--0.578769256998726-0.503257505534083	chr13	95037610	95038287	+	0	NA	intron (NM_029153, intron 1 of 8)	intron (NM_029153, intron 1 of 8)	17288	NM_029153	107767	Mm.201455	NM_029153	ENSMUSG00000021687	Scamp1	4930505M11Rik|AI415563|AW122395	secretory carrier membrane protein 1	protein-coding
unique_peak1-1227-11-7-0.508693584251613-1.21681515183528	chr11	110379546	110380250	+	0	NA	Intergenic	ID_B1|SINE|B4	119462	NM_011943	26399	Mm.14487	NM_011943	ENSMUSG00000020623	Map2k6	MEK6|MKK6|Prkmk6|SAPKK3	mitogen-activated protein kinase kinase 6	protein-coding
unique_peak2-35672-7-10--0.660340788339108-1.12966497611638	chr18	11645972	11646540	+	0	NA	Intergenic	Intergenic	-145529	NM_001252495	225182	Mm.154275	NM_175458	ENSMUSG00000041238	Rbbp8	9930104E21Rik|CtIP|RBBP-8|RIM|SAE2	retinoblastoma binding protein 8	protein-coding
unique_peak2-33239-4-10--1.48289213249054-1.5150158574804	chr10	121475591	121476113	+	0	NA	intron (NM_001242411, intron 1 of 21)	intron (NM_001242411, intron 1 of 21)	8519	NM_001242411	117600	Mm.288698	NM_001081037	ENSMUSG00000020121	Srgap1	4930572H05Rik|Arhgap13	SLIT-ROBO Rho GTPase activating protein 1	protein-coding
unique_peak1-4324-10-0-3.35641534500877-3.31132995230379	chr2	151576121	151576723	+	0	NA	Intergenic	Intergenic	-9393	NM_212446	228769	Mm.146984	NM_144889	ENSMUSG00000032869	Psmf1	AW048666|BC012260|PI31	proteasome (prosome, macropain) inhibitor subunit 1	protein-coding
unique_peak2-37129-1-7--2.62705701021674-1.80617997398389	chr4	12008125	12008547	+	0	NA	intron (NR_110955, intron 2 of 28)	RodERV21-int|LTR|ERV1	6768	NM_177861	329795	Mm.475125	NM_177861	ENSMUSG00000049488	Tmem67	5330408M12Rik|B230117O07|b2b1163.1Clo|b2b1291.1Clo	transmembrane protein 67	protein-coding
common_peak2-24902-14-10-0.439784541720347-0.519648556297791	chr17	84110758	84111436	+	0	NA	intron (NM_001171053, intron 2 of 13)	ID_B1|SINE|B4	5594	NM_001171052	116871	Mm.277668	NM_054082	ENSMUSG00000055817	Mta3	1110002J22Rik|mKIAA1266	metastasis associated 3	protein-coding
common_peak2-25365-16-18--0.129663871175524-0.307235046933848	chr18	82492170	82492860	+	0	NA	Intergenic	Intergenic	83654	NM_008082	14427	Mm.6219	NM_008082	ENSMUSG00000024553	Galr1	Galnr1	galanin receptor 1	protein-coding
common_peak2-29893-83-62-0.93694270160621-4.50628433868615	chr6	113306578	113307868	+	0	NA	Intergenic	B3A|SINE|B2	-13307	NM_133926	52163	Mm.277373	NM_133926	ENSMUSG00000030272	Camk1	AI505105|CaMKIalpha|D6Ertd263e	calcium/calmodulin-dependent protein kinase I	protein-coding
common_peak2-23091-7-8--0.370834171144123-1.00793137938329	chr14	76521686	76522046	+	0	NA	intron (NM_013745, intron 5 of 9)	intron (NM_013745, intron 5 of 9)	11168	NM_013745	27275	Mm.21138	NM_013745	ENSMUSG00000022009	Nufip1	Nufip	nuclear fragile X mental retardation protein interacting protein 1	protein-coding
common_peak2-29565-56-124--0.730188459222844-2.94812064175932	chr6	47743305	47745474	+	0	NA	Intergenic	Lx6|LINE|L1	9262	NR_030485	735289		NR_030485		Mir704	Mirn704|mmu-mir-704	microRNA 704	ncRNA
common_peak1-11808-10-18--0.891512168434816-0.804350088532826	chr16	62786346	62786768	+	0	NA	promoter-TSS (NM_178925)	promoter-TSS (NM_178925)	-15	NM_178925	106338	Mm.26321	NM_178925		Nsun3	6720484A09Rik|AU022521	NOL1/NOP2/Sun domain family member 3	protein-coding
unique_peak2-33995-5-9--1.02630843089322-1.21398586181642	chr12	87147176	87147625	+	0	NA	intron (NM_145447, intron 9 of 9)	B4A|SINE|B4	18095	NM_021446	58520	Mm.143795	NM_021446	ENSMUSG00000021252	0610007P14Rik	1190004E09Rik|AU019315|C77855|ORF11	RIKEN cDNA 0610007P14 gene	protein-coding
unique_peak1-3991-23-9-1.39983940962172-2.17218792383888	chr2	35069209	35070427	+	0	NA	Intergenic	MTEa|LTR|MaLR	-13178	NM_026697	68365	Mm.198264	NM_026697	ENSMUSG00000026878	Rab14	0610030G24Rik|2810475J17Rik|A830021G03Rik|AI314285|AI649155|D030017L14Rik	RAB14, member RAS oncogene family	protein-coding
unique_peak2-34016-3-6--1.22133801201688-1.08602067057793	chr12	105000385	105000803	+	0	NA	Intergenic	Intergenic	11249	NM_009246	20703	Mm.439695	NM_009246	ENSMUSG00000071177	Serpina1d	AI118301|Dom4|PI4|Spi1-4	serine (or cysteine) peptidase inhibitor, clade A, member 1D	protein-coding
common_peak2-30295-9-9--0.132314688483142-1.03275496310833	chr7	19308071	19308598	+	0	NA	exon (NM_001004152, exon 3 of 5)	exon (NM_001004152, exon 3 of 5)	4895	NM_001004152	243862	Mm.389833	NM_001004152	ENSMUSG00000044903	Psg22	AA408604|cea9	pregnancy-specific glycoprotein 22	protein-coding
common_peak2-23034-18-24--0.330937038546373-0.380101753845076	chr14	66257150	66258313	+	0	NA	intron (NM_001195674, intron 14 of 18)	intron (NM_001195674, intron 14 of 18)	-27509	NM_028903	71145	Mm.83840	NM_028903	ENSMUSG00000022032	Scara5	4932433F15Rik|4933425F03Rik|AV278087|Tesr	scavenger receptor class A, member 5 (putative)	protein-coding
common_peak1-11562-15-28--0.845816244571916-1.02077663956385	chr16	11253354	11254166	+	0	NA	TTS (NR_035466)	TTS (NR_035466)	658	NM_001130008	14852	Mm.325827	NM_146066		Gspt1	AI314175|AI326449|AV307676|C79774|G1st|Gst-1	G1 to S phase transition 1	protein-coding
common_peak1-14864-35-52--0.296550196100695-0.486454540233415	chr3	95282220	95283664	+	0	NA	intron (NM_001037737, intron 8 of 21)	intron (NM_001037737, intron 8 of 21)	-20190	NM_007802	13038	Mm.272085	NM_007802	ENSMUSG00000028111	Ctsk	AI323530|MMS10-Q|Ms10q|catK	cathepsin K	protein-coding
common_peak1-16724-71-27-1.83708925666237-9.99558851587577	chr6	30306437	30309126	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	33229	NM_172735	232679	Mm.29780	NM_172735	ENSMUSG00000039130	Zc3hc1	1110054L24Rik|AU018540|AU019789|HSPC216|Nipa	zinc finger, C3HC type 1	protein-coding
common_peak2-27660-17-17-0.0483713367627256-0.325169893479371	chr3	108571488	108572337	+	0	NA	intron (NM_177859, intron 6 of 11)	intron (NM_177859, intron 6 of 11)	29336	NM_177859	329738	Mm.72322	NM_177859	ENSMUSG00000049565	Aknad1	4921525H12Rik	AKNA domain containing 1	protein-coding
common_peak2-23541-15-20--0.380152672223105-0.397739447719386	chr15	78078435	78079230	+	0	NA	intron (NM_008677, intron 1 of 9)	(TCC)n|Simple_repeat|Simple_repeat	3591	NM_008677	17972	Mm.2068	NM_008677	ENSMUSG00000071715	Ncf4	AI451400|p40phox	neutrophil cytosolic factor 4	protein-coding
common_peak1-10030-18-9-0.990991056340989-1.23014042908325	chr13	13381559	13382276	+	0	NA	Intergenic	L1Md_F2|LINE|L1	103974	NM_031999	83924	Mm.379269	NM_031999	ENSMUSG00000021306	Gpr137b	AI788917|AU016435|AW546472|C730041E01|C80550|C80741|D13Abb1e|Tm7sf1	G protein-coupled receptor 137B	protein-coding
common_peak2-21309-7-9--0.522837264589173-1.05908390183068	chr11	74770340	74770790	+	0	NA	intron (NM_001002764, intron 8 of 18)	intron (NM_001002764, intron 8 of 18)	31191	NM_001002764	103677	Mm.288460	NM_001002764	ENSMUSG00000038290	Smg6	AI317223|AU041178	Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)	protein-coding
unique_peak1-6901-9-1-2.18961340640422-2.31132995230379	chr8	102865548	102865954	+	0	NA	Intergenic	Lx2A1|LINE|L1	-925380	NM_001039154	12564	Mm.441131	NM_007667	ENSMUSG00000036510	Cdh8	AI851472|cad8	cadherin 8	protein-coding
common_peak2-26669-21-13-0.762134343208631-1.0220094258199	chr2	122147627	122148324	+	0	NA	intron (NM_001099297, intron 8 of 32)	MER2|DNA|MER2_type	6567	NM_001099297	99439	Mm.108582	NM_001099297	ENSMUSG00000033268	Duox1	9930101G15Rik|AW987690|Duox2|LNOX1|LNOX2|NOXEF1|NOXEF2|P138-TOX|THOX1|THOX2	dual oxidase 1	protein-coding
unique_peak2-33112-7-12--0.901348887842903-1.31827279259406	chr10	81167249	81167880	+	0	NA	promoter-TSS (NM_001243067)	promoter-TSS (NM_001243067)	-6	NM_001243067	73610	Mm.490466	NM_001243067		Zfp433	1700123A16Rik	RIKEN cDNA 1700123A16 gene	protein-coding
common_peak1-10798-18-19--0.00900894365901106-0.306598483909153	chr14	76786905	76787811	+	0	NA	Intergenic	B1_Mur4|SINE|Alu	-28270	NM_207652	21807	Mm.153272	NM_009366	ENSMUSG00000022010	Tsc22d1	AA589566|AW105905|Egr5|TSC-22|Tgfb1i4|Tsc|Tsc22	TSC22 domain family, member 1	protein-coding
unique_peak2-39501-2-10--2.37688587490062-2.09384600808989	chr9	61946227	61946833	+	0	NA	Intergenic	Intergenic	23871	NR_039595	100628602		NR_039595	miRBase:MI0018045	Mir5133	mmu-mir-5133|mu-mir-5133	microRNA 5133	ncRNA
common_peak1-11025-46-27-1.0906410211912-3.08836129592182	chr15	38932198	38933619	+	0	NA	intron (NM_172402, intron 3 of 6)	intron (NM_172402, intron 3 of 6)	11354	NM_172402	69906	Mm.17875	NM_172402	ENSMUSG00000022299	Slc25a32	2610043O12Rik|Mftc	solute carrier family 25, member 32	protein-coding
common_peak1-16107-24-11-1.20824740204656-1.9654245668484	chr5	65455096	65456214	+	0	NA	Intergenic	Intergenic	-66815	NM_175174	71778	Mm.10281	NM_175174	ENSMUSG00000054920	Klhl5	1300013C10Rik	kelch-like 5	protein-coding
common_peak1-16850-24-17-0.623284901325404-0.890873221665474	chr6	54162461	54163514	+	0	NA	intron (NM_001163640, intron 3 of 12)	intron (NM_001163640, intron 3 of 12)	-59829	NM_023543	69993	Mm.321147	NM_023543	ENSMUSG00000004633	Chn2	1700026N20Rik|4930557O16Rik|ARHGAP3|Bch	chimerin 2	protein-coding
common_peak1-8858-15-15-0.0121647505556561-0.30803596071496	chr11	32266939	32267678	+	0	NA	intron (NM_177364, intron 1 of 12)	intron (NM_177364, intron 1 of 12)	19497	NM_177364	268396	Mm.227616	NM_177364	ENSMUSG00000040711	Sh3pxd2b	G431001E03Rik|TSK4|fad49	SH3 and PX domains 2B	protein-coding
common_peak2-31509-22-20-0.254966682308644-0.421916810733237	chr8	107488652	107489290	+	0	NA	exon (NM_197999, exon 5 of 12)	exon (NM_197999, exon 5 of 12)	3353	NM_197999	72361	Mm.26580	NM_197999	ENSMUSG00000031877	Ces2g	2210023G05Rik|Ces2l	carboxylesterase 2G	protein-coding
common_peak2-21558-13-9-0.456543935750406-0.53895475198017	chr11	96968037	96968520	+	0	NA	intron (NM_019507, intron 1 of 5)	(CA)n|Simple_repeat|Simple_repeat	8367	NM_019507	57765	Mm.94519	NM_019507	ENSMUSG00000001444	Tbx21	TBT1|Tbet|Tblym	T-box 21	protein-coding
common_peak2-22946-14-9-0.577288065470282-0.630231561310125	chr14	48295548	48295940	+	0	NA	intron (NM_001293635, intron 6 of 40)	intron (NM_001293635, intron 6 of 40)	12313	NM_008477	16709	Mm.3110	NM_008477	ENSMUSG00000021843	Ktn1	-	kinectin 1	protein-coding
common_peak1-14760-17-13-0.410941416147434-0.546772548767014	chr3	88295965	88296625	+	0	NA	intron (NM_001002011, intron 1 of 11)	L1MC4|LINE|L1	939	NM_019390	16905	Mm.243014	NM_019390	ENSMUSG00000028063	Lmna	Dhe	lamin A	protein-coding
unique_peak2-33522-3-6--1.22133801201688-1.08602067057793	chr11	76179331	76179705	+	0	NA	intron (NM_008750, intron 1 of 7)	intron (NM_008750, intron 1 of 7)	33125	NM_008750	18230	Mm.27915	NM_008750	ENSMUSG00000020844	Nxn	l11Jus13	nucleoredoxin	protein-coding
common_peak2-29929-12-10-0.189344366450341-0.386243247519795	chr6	115521759	115522367	+	0	NA	intron (NM_199033, intron 8 of 11)	intron (NM_199033, intron 8 of 11)	20531	NM_001101431	70291	Mm.133694	NM_001101431		Mkrn2os	2510049J12Rik	makorin, ring finger protein 2, opposite strand	protein-coding
unique_peak1-6652-13-8-0.608547029195456-0.660903317613904	chr8	14559162	14559844	+	0	NA	intron (NM_172910, intron 4 of 15)	GA-rich|Low_complexity|Low_complexity	-329033	NM_012000	26889	Mm.254027	NM_012000	ENSMUSG00000026317	Cln8	mnd	ceroid-lipofuscinosis, neuronal 8	protein-coding
unique_peak1-1485-7-4-0.477162735410827-1.09384600808989	chr12	117668430	117668867	+	0	NA	exon (NM_133762, exon 16 of 29)	exon (NM_133762, exon 16 of 29)	24773	NM_133762	76044	Mm.491196	NM_133762	ENSMUSG00000042029	Ncapg2	5830426I05Rik|Luzp5|Mtb|mCAP-G2	non-SMC condensin II complex, subunit G2	protein-coding
common_peak1-11175-22-15-0.647284105087405-0.849699271740893	chr15	76460756	76461660	+	0	NA	intron (NM_183091, intron 21 of 25)	intron (NM_183091, intron 21 of 25)	-4751	NM_025842	66914	Mm.30028	NM_025842	ENSMUSG00000062381	Vps28	1110014J03Rik|AI847241|D730005C08Rik	vacuolar protein sorting 28 (yeast)	protein-coding
unique_peak1-7166-9-4-0.867685311516858-1.36011389749466	chr9	59311291	59311866	+	0	NA	intron (NM_019927, intron 1 of 13)	intron (NM_019927, intron 1 of 13)	17970	NR_045640	100504377	Mm.446631	NR_045640		Gm20199	-	predicted gene, 20199	ncRNA
unique_peak2-34458-6-5--0.0195643903408542-0.947717972411649	chr14	25827693	25827953	+	0	NA	Intergenic	ORR1C2|LTR|MaLR	134904	NR_045718	75862	Mm.109191	NR_045718		4930572O13Rik	-	RIKEN cDNA 4930572O13 gene	ncRNA
common_peak2-24809-23-28--0.136213490618491-0.317118655902079	chr17	70737568	70738249	+	0	NA	Intergenic	Intergenic	-36224	NM_177639	224997	Mm.311840	NM_027712	ENSMUSG00000003279	Dlgap1	4933422O14Rik|9630002F18|AI845682|AI848168|BB075781|D17Bwg0511e|GKAP/SAPAP|GKPA/SAPAP|Gkap|Sapap1|mKIAA4162	discs, large (Drosophila) homolog-associated protein 1	protein-coding
unique_peak1-943-10-1-2.35641534500877-2.57096726280955	chr11	54952428	54952957	+	0	NA	intron (NM_172258, intron 5 of 10)	intron (NM_172258, intron 5 of 10)	12516	NM_172258	215332	Mm.87054	NM_172258	ENSMUSG00000049491	Slc36a3	PAT3|TRAMD2|tramdorin2	solute carrier family 36 (proton/amino acid symporter), member 3	protein-coding
unique_peak1-3691-15-5-1.4272022498345-1.61682445937017	chr19	43552455	43553190	+	0	NA	intron (NM_031396, intron 6 of 10)	intron (NM_031396, intron 6 of 10)	37896	NM_031396	83674	Mm.329864	NM_031396	ENSMUSG00000025189	Cnnm1	AI846314|Acdp1|CLP-1	cyclin M1	protein-coding
common_peak1-18934-7-9--0.522837264589173-1.05908390183068	chr9	45849997	45850498	+	0	NA	intron (NM_027498, intron 1 of 24)	L1_Mus1|LINE|L1	29344	NM_027498	70661	Mm.219459	NM_027498	ENSMUSG00000034135	Sik3	5730525O22Rik|9030204A07Rik|AI447252|AI846254|AI849445|Qsk|SIK-3|mKIAA0999	SIK family kinase 3	protein-coding
common_peak2-30454-17-23--0.366666162516118-0.383878263347744	chr7	45558464	45559096	+	0	NA	Intergenic	Intergenic	961124	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak2-37223-8-22--1.51833953810944-1.77631109801764	chr4	88773306	88773785	+	0	NA	Intergenic	Intergenic	-9729	NM_024433	66902	Mm.28500	NM_024433	ENSMUSG00000062937	Mtap	1300019I21Rik|MSAP	methylthioadenosine phosphorylase	protein-coding
common_peak2-21066-24-27--0.0141450192898871-0.304978344874324	chr11	48975011	48975791	+	0	NA	TTS (NM_146276)	TTS (NM_146276)	1883	NM_146276	258273	Mm.377407	NM_146276	ENSMUSG00000048378	Olfr1394	MOR280-1	olfactory receptor 1394	protein-coding
common_peak2-28747-8-8--0.164702583494742-1.00793137938329	chr5	38220092	38220352	+	0	NA	Intergenic	Intergenic	-4398	NM_010835	17701	Mm.256509	NM_010835	ENSMUSG00000048450	Msx1	AA675338|AI324650|Hox-7|Hox7|Hox7.1|msh	msh homeobox 1	protein-coding
common_peak2-22795-7-6--0.00826409175941478-0.97990265578305	chr14	8016010	8016395	+	0	NA	Intergenic	Intergenic	-9155	NM_001270812	100861615	Mm.488431	NM_001270812	ENSMUSG00000079396	LOC100861615	-	alpha takusan-like	protein-coding
unique_peak1-4769-9-1-2.18961340640422-2.31132995230379	chr3	122728917	122729439	+	0	NA	intron (NM_021503, intron 2 of 5)	intron (NM_021503, intron 2 of 5)	8727	NM_021503	59006	Mm.141157	NM_021503	ENSMUSG00000028116	Myoz2	1110012I24Rik|Fatz-2|Myozl2	myozenin 2	protein-coding
common_peak1-17280-79-35-1.65891016573431-9.87927996078587	chr6	135291128	135293887	+	0	NA	Intergenic	B1_Mur2|SINE|Alu	-20442	NM_010128	13730	Mm.182785	NM_010128	ENSMUSG00000030208	Emp1	I-8-09|TMP	epithelial membrane protein 1	protein-coding
common_peak1-9130-9-12--0.510826311736872-0.394412252720706	chr11	75531521	75532026	+	0	NA	Intergenic	Intergenic	-14616	NM_009536	22627	Mm.234700	NM_009536	ENSMUSG00000020849	Ywhae	AU019196	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide	protein-coding
common_peak1-7704-32-37-0.0311645057760748-0.312460117298692	chr1	86358558	86359457	+	0	NA	Intergenic	Intergenic	-1091866	NM_001037909	620078	Mm.386456	NM_175219	ENSMUSG00000052477	C130026I21Rik	4930565N07Rik|OTTMUSG00000029174	RIKEN cDNA C130026I21 gene	protein-coding
common_peak1-8209-12-10-0.189344366450341-0.386243247519795	chr10	7472847	7473440	+	0	NA	intron (NM_011835, intron 7 of 10)	intron (NM_011835, intron 7 of 10)	27345	NM_011835	23924	Mm.28127	NM_011835	ENSMUSG00000019794	Katna1	-	katanin p60 (ATPase-containing) subunit A1	protein-coding
common_peak1-7771-12-12--0.0516637330534535-0.309718203022949	chr1	93166397	93166996	+	0	NA	intron (NM_026454, intron 4 of 9)	ORR1D1-int|LTR|MaLR	19800	NM_026454	67921	Mm.337238	NM_026454	ENSMUSG00000034343	Ube2f	2510010F15Rik|AI851109	ubiquitin-conjugating enzyme E2F (putative)	protein-coding
common_peak1-14338-24-37--0.454717610675869-0.572500200098104	chr2	164549457	164550269	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	9058	NM_001040055	641368	Mm.422380	NM_001040055	ENSMUSG00000074593	Spint5	Gm14316|OTTMUSG00000016293	serine protease inhibitor, Kunitz type 5	protein-coding
unique_peak2-39924-3-5--0.998945590680433-0.96108193396963	chrX	104050679	104051114	+	0	NA	Intergenic	Lx8|LINE|L1	-14914	NM_199468	213436	Mm.85581	NM_199468	ENSMUSG00000047686	Zcchc5	D430021I08Rik|Gm375|Mar3|Mart3|ZHC5	zinc finger, CCHC domain containing 5	protein-coding
unique_peak2-36082-7-5-0.214128329577033-1.01466476204226	chr19	55807522	55807915	+	0	NA	Intergenic	MIRb|SINE|MIR	-8582	NM_001142922	21416	Mm.139815	NM_009333	ENSMUSG00000024985	Tcf7l2	TCF4B|TCF4E|Tcf-4|Tcf4|mTcf-4B|mTcf-4E	transcription factor 7 like 2, T cell specific, HMG box	protein-coding
unique_peak2-33603-7-17--1.37083417114412-1.23399803405144	chr11	94159018	94159789	+	0	NA	intron (NM_026313, intron 6 of 10)	intron (NM_026313, intron 6 of 10)	23822	NM_026313	67684	Mm.30927	NM_026313	ENSMUSG00000020863	Luc7l3	3300001P08Rik|Luc7a	LUC7-like 3 (S. cerevisiae)	protein-coding
unique_peak2-39594-1-12--3.32749672835784-3.1004765869889	chr9	77532051	77532620	+	0	NA	Intergenic	Intergenic	47796	NM_172925	244923	Mm.138238	NM_172925	ENSMUSG00000044938	Klhl31	9830147P19Rik|D930047P17Rik|Kbtbd1	kelch-like 31	protein-coding
common_peak2-26603-10-10--0.103016273628528-0.301029995663987	chr2	113620907	113621284	+	0	NA	intron (NM_009162, intron 4 of 5)	intron (NM_009162, intron 4 of 5)	-22290	NM_011824	23892	Mm.166318	NM_011824		Grem1	Cktsf1b1|Drm|Grem|ld	gremlin 1	protein-coding
common_peak1-15489-15-25--0.688274967585436-0.73354163167379	chr4	109201725	109202383	+	0	NA	intron (NM_026291, intron 1 of 4)	intron (NM_026291, intron 1 of 4)	1755	NM_001199090	67646	Mm.45820	NM_026291	ENSMUSG00000060491	4930522H14Rik	1700007J23Rik	RIKEN cDNA 4930522H14 gene	protein-coding
common_peak1-10454-9-7-0.18961340640422-1.05908390183068	chr13	108228673	108229201	+	0	NA	Intergenic	Intergenic	-30965	NR_045083	105120	Mm.417700	NR_045083		AI197445	-	expressed sequence AI197445	ncRNA
unique_peak1-6243-6-3-0.565398110380302-1.08602067057793	chr7	18860857	18861220	+	0	NA	Intergenic	ORR1B2|LTR|MaLR	30342	NM_153749	266815	Mm.106769	NM_153749	ENSMUSG00000054005	Mill1	5530400I18Rik	MHC I like leukocyte 1	protein-coding
unique_peak2-39930-6-13--1.2419568116773-1.58711810488664	chrX	106185855	106186456	+	0	NA	Intergenic	MLT1D|LTR|MaLR	-10669	NR_033596	70550	Mm.482937	NR_033596	ENSMUSG00000081793	5730416F02Rik	-	capping protein (actin filament), gelsolin-like pseudogene	pseudo
unique_peak1-2532-12-1-2.64877598508764-3.36932189928148	chr16	21225936	21226476	+	0	NA	Intergenic	Intergenic	21338	NM_010143	13845	Mm.6972	NM_010143	ENSMUSG00000005958	Ephb3	AW456895|Cek10|Etk2|HEK2|MDK5|Sek4|Tyro6	Eph receptor B3	protein-coding
common_peak1-10852-22-25--0.0531556130536872-0.301029995663976	chr14	121035586	121036428	+	0	NA	Intergenic	Intergenic	158324	NM_029519	76108	Mm.261448	NM_029519	ENSMUSG00000051615	Rap2a	5830461H18Rik	RAS related protein 2a	protein-coding
unique_peak1-4200-25-14-0.954959309736587-1.46151065785802	chr2	118519921	118521281	+	0	NA	intron (NM_001145854, intron 8 of 9)	B1_Mur2|SINE|Alu	9098	NM_001081971	383787	Mm.35758	NM_001081971	ENSMUSG00000078137	Ankrd63	Gm1337	ankyrin repeat domain 63	protein-coding
common_peak1-15870-33-57--0.526643432602043-0.951347777694914	chr5	5418327	5419412	+	0	NA	Intergenic	L1_Mus2|LINE|L1	-38618	NM_011074	18647	Mm.389061	NM_011074	ENSMUSG00000028926	Cdk14	Pftk1|mKIAA0834	cyclin-dependent kinase 14	protein-coding
unique_peak1-1601-11-6-0.701338662194009-1.32595962126035	chr13	36730043	36730676	+	0	NA	Intergenic	Lx2|LINE|L1	95987	NM_153529	68404	Mm.232930	NM_153529	ENSMUSG00000039114	Nrn1	0710008J23Rik|Cpg15|Nrn	neuritin 1	protein-coding
unique_peak1-5968-15-5-1.4272022498345-1.61682445937017	chr6	94391273	94391854	+	0	NA	Intergenic	RLTR20C|LTR|ERVK	-58745	NM_026255	67582	Mm.280725	NM_026255	ENSMUSG00000045100	Slc25a26	4930433D19Rik|4933433F13Rik|AW557176|D6Bwg0781e|Slc25a6	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26	protein-coding
common_peak2-24909-13-34--1.3508109863072-2.16696607243888	chr17	84511553	84512552	+	0	NA	Intergenic	Intergenic	34052	NR_045458	74473	Mm.399575	NR_045458		4933433H22Rik	-	RIKEN cDNA 4933433H22 gene	ncRNA
common_peak2-24074-34-24-0.738212337226542-1.3806499615138	chr16	30587266	30588043	+	0	NA	promoter-TSS (NM_178069)	promoter-TSS (NM_178069)	21	NM_178069	224092	Mm.567	NM_178069		Lsg1	5830465I20|AA409273|D16Bwg1547e	large subunit GTPase 1 homolog (S. cerevisiae)	protein-coding
common_peak1-9392-9-5-0.604650905683064-1.21398586181642	chr11	99385370	99385877	+	0	NA	Intergenic	Intergenic	-3051	NM_213730	237934	Mm.484091	NM_213730	ENSMUSG00000064165	Krt39	4732494G06Rik|Ka35	keratin 39	protein-coding
common_peak2-25127-23-32--0.322626614849373-0.436052471002795	chr18	39388864	39390046	+	0	NA	intron (NM_175164, intron 13 of 22)	intron (NM_175164, intron 13 of 22)	236656	NM_175164	71302	Mm.329396	NM_175164	ENSMUSG00000036452	Arhgap26	1810044B20Rik|2610010G17Rik|4933432P15Rik|AI853435|mKIAA0621	Rho GTPase activating protein 26	protein-coding
common_peak1-8247-20-27--0.319280137466411-0.412012472183092	chr10	18844754	18845636	+	0	NA	Intergenic	Intergenic	-16360	NR_038021	100504265	Mm.383417	NR_038021		Gm20139	-	predicted gene, 20139	ncRNA
common_peak2-20736-55-60-0.273882533589815-0.619228716864132	chr10	99263245	99265064	+	0	NA	Intergenic	PB1D10|SINE|Alu	-41862	NM_027945	71832	Mm.483162	NM_027945	ENSMUSG00000046934	Csl	1700007H16Rik	citrate synthase like	protein-coding
unique_peak1-937-26-6-2.12054417010086-4.0937649558367	chr11	54018785	54019765	+	0	NA	intron (NR_045506, intron 2 of 2)	intron (NR_045506, intron 2 of 2)	7515	NR_045506	71056	Mm.56332	NR_045506	ENSMUSG00000086209	4933405E24Rik	-	RIKEN cDNA 4933405E24 gene	ncRNA
common_peak1-13038-11-9-0.186765489364251-0.344532117358383	chr19	5691981	5692754	+	0	NA	intron (NM_022012, intron 3 of 11)	intron (NM_022012, intron 3 of 11)	3236	NM_022012	26403	Mm.185026	NM_022012	ENSMUSG00000004054	Map3k11	2610017K16Rik|Mlk3|PTK1|SPRK	mitogen-activated protein kinase kinase kinase 11	protein-coding
unique_peak1-4861-8-5-0.420259917226415-1.10484139239135	chr4	150798205	150798740	+	0	NA	intron (NM_001081557, intron 5 of 23)	(TTG)n|Simple_repeat|Simple_repeat	-366410	NM_009498	22319	Mm.273930	NM_009498	ENSMUSG00000028955	Vamp3	D130027G05Rik|VAMP-3|ceb	vesicle-associated membrane protein 3	protein-coding
common_peak2-25104-14-11-0.314253659636488-0.435191258261915	chr18	36706561	36707163	+	0	NA	intron (NM_001271547, intron 19 of 19)	intron (NM_001271547, intron 19 of 19)	-13395	NM_175375	108857	Mm.482287	NM_175375	ENSMUSG00000024483	Ankhd1	1110004O12Rik|4933432B13Rik|9130019P20Rik|A530027J04Rik|A630021B20Rik|AA571404|Mask|mFLJ00246|mKIAA1085	ankyrin repeat and KH domain containing 1	protein-coding
unique_peak2-39883-2-7--1.91745425626332-1.45399745587252	chrX	74429576	74430022	+	0	NA	Intergenic	L1_Mur2|LINE|L1	-326767	NM_020601	21372	Mm.258476	NM_020601	ENSMUSG00000025246	Tbl1x	5330429M20|Tbl1	transducin (beta)-like 1 X-linked	protein-coding
common_peak1-14845-40-150--1.57942905657398-11.3654194219529	chr3	94757457	94758939	+	0	NA	promoter-TSS (NM_017395)	promoter-TSS (NM_017395)	-739	NM_017395	53970	Mm.24308	NM_017395	ENSMUSG00000005774	Rfx5	-	regulatory factor X, 5 (influences HLA class II expression)	protein-coding
unique_peak1-4988-11-2-1.92373108353046-2.32232533660526	chr4	115656985	115657594	+	0	NA	Intergenic	Intergenic	33218	NM_010173	14073	Mm.256025	NM_010173	ENSMUSG00000034171	Faah	AW412498	fatty acid amide hydrolase	protein-coding
unique_peak2-36579-13-25--0.921967687503323-0.983972868822056	chr2	174438347	174439272	+	0	NA	Intergenic	Intergenic	-30226	NM_001099328	100043757	Mm.48711	NM_001099328	ENSMUSG00000050600	Zfp831	ENSMUSG00000050600|OTTMUSG00000017459	zinc finger protein 831	protein-coding
common_peak1-12570-116-42-2.06786457880732-20.364849820333	chr18	11047723	11051233	+	0	NA	TTS (NR_105022)	TTS (NR_105022)	-3030	NM_010258	14465	Mm.329287	NM_010258	ENSMUSG00000005836	Gata6	AA410133|GATA-6	GATA binding protein 6	protein-coding
common_peak1-16912-17-18--0.0296311752385474-0.306899554715732	chr6	72620039	72620919	+	0	NA	intron (NM_009332, intron 3 of 11)	intron (NM_009332, intron 3 of 11)	40654	NR_040421	100038714	Mm.321330	NR_040421		Gm15401	ENSMUSG00000072999|OTTMUSG00000021199	predicted gene 15401	ncRNA
unique_peak2-39354-1-7--2.62705701021674-1.80617997398389	chr9	5345353	5345781	+	0	NA	promoter-TSS (NM_009808)	promoter-TSS (NM_009808)	91	NM_009808	12364	Mm.42163	NM_009808	ENSMUSG00000025887	Casp12	-	caspase 12	protein-coding
unique_peak2-35750-7-16--1.28837201095215-1.08658567012551	chr18	38205577	38206136	+	0	NA	Intergenic	MLT1I|LTR|MaLR	-47233	NM_001205336	106952	Mm.247642	NM_139206	ENSMUSG00000024451	Arap3	Centd3|Drag1|E030006K04Rik|cnt-d3	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3	protein-coding
common_peak1-10217-11-17--0.661231417190699-0.58239619684445	chr13	49301132	49301579	+	0	NA	intron (NM_026738, intron 2 of 5)	intron (NM_026738, intron 2 of 5)	10040	NM_026738	68480	Mm.3336	NM_026738	ENSMUSG00000037960	1110007C09Rik	AI851695|Bincard	RIKEN cDNA 1110007C09 gene	protein-coding
common_peak1-12949-27-25-0.291106232754144-0.488172498216822	chr19	42090322	42091196	+	0	NA	intron (NM_145500, intron 1 of 2)	intron (NM_145500, intron 1 of 2)	-19769	NM_020033	56642	Mm.143737	NM_020033	ENSMUSG00000025172	Ankrd2	Arpp|mArpp	ankyrin repeat domain 2 (stretch responsive muscle)	protein-coding
unique_peak2-37792-3-12--2.11442280810037-2.15846853396659	chr5	121835730	121836263	+	0	NA	promoter-TSS (NM_172275)	promoter-TSS (NM_172275)	-372	NM_172275	231712	Mm.20488	NM_172275	ENSMUSG00000042726	Trafd1	1110008K06Rik|Fln29	TRAF type zinc finger domain containing 1	protein-coding
common_peak1-14951-8-14--0.901668177660948-0.660903317613906	chr3	104233554	104234080	+	0	NA	Intergenic	RCHARR1|DNA|MER1_type	81962	NM_001025067	269473	Mm.34855	NM_001025067	ENSMUSG00000032913	Lrig2	4632419I10Rik|BB096938	leucine-rich repeats and immunoglobulin-like domains 2	protein-coding
unique_peak2-38638-3-9--1.73591118484664-1.57096726280955	chr7	84029786	84030175	+	0	NA	intron (NM_001199224, intron 21 of 22)	intron (NM_001199224, intron 21 of 22)	655207	NM_001199224	244071	Mm.322829	NM_172902	ENSMUSG00000025754	Agbl1	Ccp4|D430020F16|EG244071|Nna1-l1	ATP/GTP binding protein-like 1	protein-coding
unique_peak2-39023-6-7--0.434601889619698-0.97990265578305	chr8	61275526	61276034	+	0	NA	intron (NM_175032, intron 1 of 11)	intron (NM_175032, intron 1 of 11)	-96187	NM_001177534	100271928	Mm.484123	NM_001177534		Gm15881	OTTMUSG00000027193	predicted gene 15881	protein-coding
common_peak2-31286-4-8--1.19338551529556-1.21878474469819	chr8	72438468	72438857	+	0	NA	exon (NM_001286450, exon 9 of 13)	exon (NM_001286450, exon 9 of 13)	-12205	NM_023312	67184	Mm.21162	NM_023312	ENSMUSG00000036199	Ndufa13	2700054G14Rik|AU022060|CDA016|CGI-39|GRIM-19|Grim19	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13	protein-coding
common_peak2-27719-35-89--1.06048283786717-3.85608468545679	chr3	122618699	122620209	+	0	NA	intron (NR_046036, intron 3 of 5)	intron (NR_046036, intron 3 of 5)	7580	NR_046036	74057	Mm.159123	NR_046036		4933405D12Rik	-	RIKEN cDNA 4933405D12 gene	ncRNA
common_peak1-11271-23-27--0.0855874175485232-0.30512735654709	chr15	81694087	81695038	+	0	NA	TTS (NM_026737)	TTS (NM_026737)	-5806	NM_020507	57259	Mm.323595	NM_020507	ENSMUSG00000048546	Tob2	2900090N22Rik|4930545K18Rik|AV071822|mKIAA1663	transducer of ERBB2, 2	protein-coding
common_peak1-16316-17-13-0.410941416147434-0.546772548767014	chr5	115157520	115158248	+	0	NA	promoter-TSS (NM_029992)	promoter-TSS (NM_029992)	96	NM_029992	77832	Mm.239698	NM_029992	ENSMUSG00000002486	Tchp	A930031F18Rik|AV279199	trichoplein, keratin filament binding	protein-coding
common_peak1-11245-9-10--0.269818212233077-1.05503135781948	chr15	79951532	79952046	+	0	NA	Intergenic	MER45R|DNA|Tip100	-11795	NM_025609	66513	Mm.288245	NM_025609	ENSMUSG00000022414	Tab1	2310012M03Rik|Map3k7ip1|b2b449Clo	TGF-beta activated kinase 1/MAP3K7 binding protein 1	protein-coding
unique_peak2-37654-9-9--0.132314688483142-1.03275496310833	chr5	91565333	91565708	+	0	NA	Intergenic	RMER17C|LTR|ERVK	-3121	NM_009704	11839	Mm.8039	NM_009704	ENSMUSG00000029378	Areg	AR|Sdgf	amphiregulin	protein-coding
common_peak1-18805-19-15-0.402687326661686-0.519193887192487	chr9	73039434	73040353	+	0	NA	Intergenic	Intergenic	78617	NM_198609	225215	Mm.379366	NM_198609	ENSMUSG00000032215	Rsl24d1	2410159K22Rik	ribosomal L24 domain containing 1	protein-coding
unique_peak1-4997-11-2-1.92373108353046-2.32232533660526	chr4	117329941	117330467	+	0	NA	intron (NM_001285901, intron 7 of 7)	intron (NM_001285901, intron 7 of 7)	24626	NM_023178	66233	Mm.29142	NM_023178	ENSMUSG00000009640	Dmap1	1500016M21Rik|DNMAP1|DNMTAP1|Dmtap1|mKIAA1425	DNA methyltransferase 1-associated protein 1	protein-coding
common_peak2-22486-11-21--0.950738034385684-0.991115276827166	chr13	49300935	49301611	+	0	NA	intron (NM_026738, intron 2 of 5)	intron (NM_026738, intron 2 of 5)	10122	NM_026738	68480	Mm.3336	NM_026738	ENSMUSG00000037960	1110007C09Rik	AI851695|Bincard	RIKEN cDNA 1110007C09 gene	protein-coding
common_peak2-29438-30-28-0.311694414364301-0.518746288394487	chr6	13871043	13871997	+	0	NA	Intergenic	Intergenic	49951	NR_045995	76311	Mm.367129	NR_045995	ENSMUSG00000097616	1110019D14Rik	-	RIKEN cDNA 1110019D14 gene	ncRNA
common_peak1-10059-23-28--0.136213490618491-0.317118655902079	chr13	21452764	21454094	+	0	NA	Intergenic	MTB|LTR|MaLR	-1260	NM_016684	22758	Mm.24124	NM_016684	ENSMUSG00000036721	Zscan12	2510038J07Rik|FPM315|Zfp96|mKIAA0426	zinc finger and SCAN domain containing 12	protein-coding
common_peak1-19414-9-9--0.132314688483142-1.03275496310833	chrX	73915306	73915808	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-67294	NM_001201395	74987	Mm.107996	NM_001201395	ENSMUSG00000079525	4930468A15Rik	-	RIKEN cDNA 4930468A15 gene	protein-coding
common_peak1-11917-9-10--0.269818212233077-1.05503135781948	chr17	35896824	35897463	+	0	NA	Intergenic	Intergenic	-12252	NR_045459	74601	Mm.410840	NR_045459	ENSMUSG00000092171	4833427F10Rik	-	RIKEN cDNA 4833427F10 gene	ncRNA
common_peak2-24316-25-13-1.0544949832875-1.65862513589797	chr17	56163895	56164565	+	0	NA	intron (NM_001252471, intron 1 of 8)	intron (NM_001252471, intron 1 of 8)	11830	NM_013664	20405	Mm.1773	NM_013664	ENSMUSG00000003200	Sh3gl1	C77078|EEN|SH3P8|Sh3d2b	SH3-domain GRB2-like 1	protein-coding
common_peak2-20613-22-29--0.259606490521114-0.36542888694933	chr10	80072970	80074247	+	0	NA	intron (NM_019575, intron 4 of 6)	intron (NM_019575, intron 4 of 6)	1603	NR_105877	102465550		NR_105877		Mir6912	mmu-mir-6912	microRNA mir-6912	ncRNA
unique_peak2-32476-5-9--1.02630843089322-1.21398586181642	chr1	34123468	34123911	+	0	NA	intron (NM_134448, intron 1 of 97)	intron (NM_134448, intron 1 of 97)	-50515	NR_105861	102466987		NR_105861		Mir6896	mmu-mir-6896	microRNA mir-6896	ncRNA
common_peak2-29347-98-193--0.398144148756577-1.65660557353303	chr5	149050839	149053138	+	0	NA	intron (NM_029920, intron 7 of 14)	intron (NM_029920, intron 7 of 14)	159492	NM_007513	11987	Mm.275489	NM_007513	ENSMUSG00000041313	Slc7a1	4831426K01Rik|AI447493|Atrc-1|Atrc1|Cat1|Rec-1|Rev-1|mCAT-1	solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	protein-coding
common_peak1-11466-10-9-0.0344872501214071-1.05503135781948	chr15	101929449	101929961	+	0	NA	Intergenic	Intergenic	-3714	NM_153533	209039	Mm.29389	NM_153533	ENSMUSG00000037003	Tenc1	C1-ten|nep|nph	tensin like C1 domain-containing phosphatase	protein-coding
common_peak1-14750-19-20-0.0103699038829257-0.306326795069978	chr3	87909774	87910656	+	0	NA	intron (NM_001033484, intron 22 of 37)	intron (NM_001033484, intron 22 of 37)	24242	NM_001033484	404710	Mm.331133	NM_001033484	ENSMUSG00000028068	Iqgap3	AI593484|D030034H08	IQ motif containing GTPase activating protein 3	protein-coding
unique_peak2-36719-13-31--1.22152796936223-1.73082168901047	chr3	52103470	52104480	+	0	NA	intron (NM_019739, intron 1 of 2)	intron (NM_019739, intron 1 of 2)	31716	NM_019739	56458	Mm.29891	NM_019739	ENSMUSG00000044167	Foxo1	AI876417|Afxh|FKHR|Fkhr1|Foxo1a	forkhead box O1	protein-coding
unique_peak2-34999-7-7--0.200909169701811-0.97990265578305	chr15	99651139	99651538	+	0	NA	promoter-TSS (NM_023063)	promoter-TSS (NM_023063)	-758	NM_023063	65970	Mm.33207	NM_023063	ENSMUSG00000023022	Lima1	Eplin	LIM domain and actin binding 1	protein-coding
common_peak1-17085-23-49--0.922088685265644-1.85759988472352	chr6	108783045	108784012	+	0	NA	intron (NM_138677, intron 1 of 11)	intron (NM_138677, intron 1 of 11)	4893	NM_138677	192193	Mm.21596	NM_138677	ENSMUSG00000030104	Edem1	A130059K23Rik|EDEM|mKIAA0212	ER degradation enhancer, mannosidase alpha-like 1	protein-coding
unique_peak2-38787-1-6--2.43441193227435-1.56314192529759	chr7	128418197	128418583	+	0	NA	Intergenic	Intergenic	-117420	NM_001081327	195646	Mm.247449	NM_177575	ENSMUSG00000046321	Hs3st2	6430516N12Rik|A830061E14Rik|AW491345	heparan sulfate (glucosamine) 3-O-sulfotransferase 2	protein-coding
common_peak2-26105-19-28--0.455293668465885-0.518921928796332	chr2	3749121	3750308	+	0	NA	Intergenic	RLTR19|LTR|ERVK	118984	NM_025626	66540	Mm.277864	NM_025626	ENSMUSG00000026655	Fam107b	3110001A13Rik|AA589595|AA959793|AI132312	family with sequence similarity 107, member B	protein-coding
common_peak2-28584-7-6--0.00826409175941478-0.97990265578305	chr5	14040291	14040619	+	0	NA	intron (NM_011348, intron 1 of 16)	intron (NM_011348, intron 1 of 16)	15179	NM_011348	20349	Mm.134093	NM_011348	ENSMUSG00000063531	Sema3e	6430702L12|AA408817|Semah|mKIAA0331	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E	protein-coding
common_peak1-12434-27-41--0.400771471883525-0.542588322087496	chr17	78417334	78418258	+	0	NA	Intergenic	L1M4b|LINE|L1	-181792	NM_015800	50766	Mm.311912	NM_015800	ENSMUSG00000024074	Crim1	AU015004	cysteine rich transmembrane BMP regulator 1 (chordin like)	protein-coding
common_peak2-27842-31-49--0.418617518961601-0.665814527695537	chr3	152143766	152145428	+	0	NA	exon (NM_001081277, exon 11 of 14)	exon (NM_001081277, exon 11 of 14)	84949	NM_001287139	108946	Mm.379292	NM_198416	ENSMUSG00000039068	Zzz3	3110065C23Rik|6430567E01Rik|AA408566|AI481057|AW556059|R75514	zinc finger, ZZ domain containing 3	protein-coding
common_peak2-28653-32-45--0.244469936837353-0.394172396164276	chr5	31048190	31049106	+	0	NA	intron (NM_023047, intron 2 of 12)	intron (NM_023047, intron 2 of 12)	34380	NM_023047	65254	Mm.27732	NM_023047	ENSMUSG00000029168	Dpysl5	CRAM|CRMP-5|Crmp5	dihydropyrimidinase-like 5	protein-coding
common_peak2-28098-8-7-0.00522241794757061-1.00793137938329	chr4	86857559	86857931	+	0	NA	intron (NM_001110240, intron 1 of 9)	intron (NM_001110240, intron 1 of 9)	16122	NM_001110240	76376	Mm.490487	NM_172426	ENSMUSG00000037996	Slc24a2	2810021B17Rik|6330417K15Rik|AI847460|Nckx2	solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	protein-coding
common_peak1-16533-12-18--0.599151528355947-0.476916024233333	chr5	142920944	142921598	+	0	NA	intron (NM_199068, intron 2 of 8)	intron (NM_199068, intron 2 of 8)	-18614	NM_172725	231855	Mm.78250	NM_172725	ENSMUSG00000039623	Ap5z1	C330006K01Rik	adaptor-related protein complex 5, zeta 1 subunit	protein-coding
common_peak2-30735-33-95--1.25362493819563-5.31116281903464	chr7	116443462	116445465	+	0	NA	intron (NM_054103, intron 13 of 13)	L1MA6|LINE|L1	-130641	NM_057173	109594	Mm.360145	NM_057173	ENSMUSG00000036111	Lmo1	Rbtn-1|Rbtn1|Ttg1	LIM domain only 1	protein-coding
common_peak2-27259-41-52--0.0267717497145386-0.301029995663982	chr3	56182849	56184194	+	0	NA	Intergenic	Intergenic	-195898	NM_030595	26422	Mm.384353	NM_030595	ENSMUSG00000027799	Nbea	Lyst2|mKIAA1544	neurobeachin	protein-coding
common_peak2-25783-35-45--0.092191697594509-0.310901174692144	chr19	34551250	34552738	+	0	NA	Intergenic	Intergenic	-2369	NM_009890	12642	Mm.30824	NM_009890	ENSMUSG00000050370	Ch25h	AI462618|m25OH	cholesterol 25-hydroxylase	protein-coding
common_peak2-20120-8-15--0.994777582052429-0.771068449301683	chr1	163380031	163380733	+	0	NA	Intergenic	RLTR31A_Mm|LTR|ERVK	-44406	NM_183391	240873	Mm.276823	NM_183391	ENSMUSG00000066755	Tnfsf18	Gitrl	tumor necrosis factor (ligand) superfamily, member 18	protein-coding
common_peak1-10238-14-42--1.52704859434445-3.19271205772593	chr13	52980514	52981127	+	0	NA	intron (NM_016709, intron 6 of 9)	L1_Mus3|LINE|L1	44226	NM_016709	11992	Mm.252034	NM_016709	ENSMUSG00000021460	Auh	C77140|W91705	AU RNA binding protein/enoyl-coenzyme A hydratase	protein-coding
common_peak2-27614-17-36--0.991157027423912-1.46094028072561	chr3	104511171	104512080	+	0	NA	Intergenic	Intergenic	68840	NM_183224	329731	Mm.389494	NM_183224	ENSMUSG00000055865	Fam19a3	7530404M11Rik|TAFA3|Tafa-3	family with sequence similarity 19, member A3	protein-coding
common_peak2-20538-40-82--0.716063748595826-1.88456604681059	chr10	67096182	67097450	+	0	NA	Intergenic	Intergenic	-85113	NM_001005419	211488	Mm.297250	NM_001005419	ENSMUSG00000057134	Ado	Gm237	2-aminoethanethiol (cysteamine) dioxygenase	protein-coding
unique_peak1-6397-10-3-1.35641534500877-1.75805390616669	chr7	80130239	80130800	+	0	NA	Intergenic	Lx7|LINE|L1	116435	NR_046024	625243	Mm.261798	NR_046024		Gm6567	-	predicted gene 6567	ncRNA
common_peak1-12132-28-18-0.805031606377877-1.27334590136207	chr17	27083759	27084750	+	0	NA	TTS (NR_037244)	TTS (NR_037244)	810	NR_037244	100526534		NR_037244	miRBase:MI0014046	Mir3083	mmu-mir-3083	microRNA 3083	ncRNA
common_peak2-21448-11-10-0.0492619656143161-0.31137425193576	chr11	86652758	86653182	+	0	NA	Intergenic	Intergenic	-31808	NM_026191	67487	Mm.260627	NM_026191	ENSMUSG00000018425	Dhx40	2410016C14Rik|ARG147|DDX40|PAD	DEAH (Asp-Glu-Ala-His) box polypeptide 40	protein-coding
common_peak1-18254-9-7-0.18961340640422-1.05908390183068	chr8	33903796	33904336	+	0	NA	Intergenic	Intergenic	156432	NM_001177589	100042715	Mm.291093	NM_001177589		Gm3985	-	predicted gene 3985	protein-coding
unique_peak1-4396-7-1-1.79909083029819-1.80617997398389	chr2	165503868	165504234	+	0	NA	intron (NM_001271962, intron 2 of 15)	IAPEz-int|LTR|ERVK	23253	NM_010165	14049	Mm.282719	NM_010165	ENSMUSG00000017897	Eya2	Eab1	eyes absent 2 homolog (Drosophila)	protein-coding
unique_peak1-6283-11-4-1.18676548936425-1.68134727924692	chr7	28834243	28834707	+	0	NA	intron (NM_011874, intron 1 of 10)	intron (NM_011874, intron 1 of 10)	636	NM_011874	23996	Mm.29582	NM_011874	ENSMUSG00000030603	Psmc4	CIP21|MIP224	proteasome (prosome, macropain) 26S subunit, ATPase, 4	protein-coding
unique_peak1-6241-14-1-2.89921616035764-3.91338994363176	chr7	18231124	18231371	+	0	NA	Intergenic	MERVL-int|LTR|ERVL	-26415	NR_002857	232919	Mm.153893	NR_002857		Psg-ps1	AV036018|Cea-6|Cea6	pregnancy specific glycoprotein pseudogene 1	pseudo
common_peak1-12664-24-35--0.376715098674596-0.470271536760928	chr18	36559560	36560313	+	0	NA	Intergenic	Intergenic	51658	NM_001081365	66060	Mm.272527	NM_001081365		Cystm1	0610010O12Rik	cysteine-rich transmembrane module containing 1	protein-coding
common_peak2-31303-11-8-0.338768582809301-1.14218153353838	chr8	75489207	75489625	+	0	NA	intron (NM_010687, intron 6 of 14)	intron (NM_010687, intron 6 of 14)	-50995	NR_039551	100628574		NR_039551	miRBase:MI0016979	Mir28b	mmu-mir-28b	microRNA 28b	ncRNA
common_peak2-22192-20-16-0.400611943340854-0.507611860039817	chr12	108792094	108792737	+	0	NA	Intergenic	Intergenic	181283	NR_045973	74968	Mm.359821	NR_045973	ENSMUSG00000085641	4930465M20Rik	4930431H15Rik	RIKEN cDNA 4930465M20 gene	ncRNA
common_peak1-11836-41-52--0.0267717497145386-0.301029995663982	chr16	85172281	85173883	+	0	NA	intron (NM_001198823, intron 1 of 17)	CpG	870	NM_001198825	11820	Mm.277585	NM_007471	ENSMUSG00000022892	App	Abeta|Abpp|Adap|Ag|Cvap|E030013M08Rik|betaApp	amyloid beta (A4) precursor protein	protein-coding
common_peak1-7930-19-13-0.595332404604082-0.713635438203849	chr1	150099282	150099963	+	0	NA	Intergenic	Intergenic	1708792	NM_008869	18783	Mm.4186	NM_008869	ENSMUSG00000056220	Pla2g4a	Pla2g4|cPLA2|cPLA2alpha	phospholipase A2, group IVA (cytosolic, calcium-dependent)	protein-coding
unique_peak1-1415-9-5-0.604650905683064-1.21398586181642	chr12	79944247	79944751	+	0	NA	exon (NM_023721, exon 9 of 9)	exon (NM_023721, exon 9 of 9)	18126	NM_023721	73834	Mm.491124	NM_023721	ENSMUSG00000021114	Atp6v1d	1110004P10Rik|Atp6m|VATD|Vma8	ATPase, H+ transporting, lysosomal V1 subunit D	protein-coding
common_peak1-14660-15-17--0.157760250886656-0.307611222530528	chr3	58372964	58373773	+	0	NA	Intergenic	RMER16-int|LTR|ERVK	-7212	NM_001040396	69227	Mm.270950	NM_001040396	ENSMUSG00000075700	Selt	2810407C02Rik|5730408P04Rik	selenoprotein T	protein-coding
common_peak1-12124-7-29--2.10779976531033-3.43644803111449	chr17	26715673	26716144	+	0	NA	intron (NM_026170, intron 1 of 9)	(CA)n|Simple_repeat|Simple_repeat	17451	NM_026170	67458	Mm.30496	NM_026170	ENSMUSG00000001576	Ergic1	1200007D18Rik|maa-136	endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	protein-coding
common_peak1-17797-18-14-0.406028555619833-0.532159081577619	chr7	99140477	99141157	+	0	NA	intron (NM_011807, intron 9 of 22)	intron (NM_011807, intron 9 of 22)	-70087	NM_001243046	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
common_peak2-27584-14-26--0.855671341805824-0.949797625454538	chr3	101377035	101377963	+	0	NA	Intergenic	Intergenic	31131	NM_144900	11928	Mm.280103	NM_144900	ENSMUSG00000033161	Atp1a1	Atpa-1|BC010319	ATPase, Na+/K+ transporting, alpha 1 polypeptide	protein-coding
unique_peak1-1647-8-2-1.42025991722641-1.65811743852845	chr13	55172119	55172610	+	0	NA	intron (NM_001293660, intron 4 of 12)	intron (NM_001293660, intron 4 of 12)	29292	NM_011307	20184	Mm.259301	NM_011307	ENSMUSG00000025878	Uimc1	9430016E08Rik|D330018D10Rik|D630032M02Rik|RIP110|Rxrip110	ubiquitin interaction motif containing 1	protein-coding
common_peak2-31947-21-28--0.288491729861336-0.367910579842127	chr9	64960847	64961503	+	0	NA	exon (NM_001290315, exon 2 of 20)	exon (NM_001290315, exon 2 of 20)	11882	NM_020043	56741	Mm.209041	NM_020043	ENSMUSG00000032816	Igdcc4	DDM36|Nope	immunoglobulin superfamily, DCC subclass, member 4	protein-coding
common_peak1-16097-9-10--0.269818212233077-1.05503135781948	chr5	64811605	64812057	+	0	NA	Intergenic	MTD-int|LTR|MaLR	47350	NR_040681	69999	Mm.261413	NR_040681		1700027F09Rik	-	RIKEN cDNA 1700027F09 gene	ncRNA
common_peak1-10872-64-41-1.07312897892984-4.10644008243844	chr15	38452053	38453751	+	0	NA	Intergenic	Intergenic	-3881	NM_018745	54375	Mm.250214	NM_018745	ENSMUSG00000037458	Azin1	1700085L02Rik|AI414949|Oazi|Oazin	antizyme inhibitor 1	protein-coding
common_peak1-11042-7-8--0.370834171144123-1.00793137938329	chr15	44457408	44457883	+	0	NA	intron (NM_019480, intron 2 of 6)	intron (NM_019480, intron 2 of 6)	6458	NM_019480	55960	Mm.287896	NM_019480	ENSMUSG00000022339	Ebag9	AI835379|Rcas1	estrogen receptor-binding fragment-associated gene 9	protein-coding
unique_peak2-37647-2-21--3.37688587490062-4.27364484827118	chr5	90594626	90595349	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	58034	NR_028088	231430	Mm.319697	NM_001033310	ENSMUSG00000035505	Cox18	BC038311	cytochrome c oxidase assembly protein 18	protein-coding
unique_peak1-1512-11-5-0.923731083530457-1.477227296591	chr13	5604295	5604885	+	0	NA	Intergenic	Intergenic	252748	NR_045891	71867	Mm.179181	NR_045891		1700016G22Rik	-	RIKEN cDNA 1700016G22 gene	ncRNA
unique_peak2-33894-3-21--2.87341470859657-3.59864904409228	chr12	50648822	50649671	+	0	NA	Intergenic	L1_Mm|LINE|L1	-67397	NR_045472	69054	Mm.417838	NR_045472		1810007C17Rik	-	RIKEN cDNA 1810007C17 gene	ncRNA
unique_peak2-34950-4-5--0.608423014574403-0.909929411522249	chr15	90413350	90413752	+	0	NA	intron (NM_025815, intron 7 of 19)	Lx7|LINE|L1	96268	NM_025815	66871	Mm.290991	NM_025815	ENSMUSG00000052560	Cpne8	1200003E11Rik|1500031E20Rik	copine VIII	protein-coding
unique_peak2-33427-6-11--1.01956439034085-1.32595962126035	chr11	60454568	60455173	+	0	NA	Intergenic	Intergenic	-58322	NM_001159405	16897	Mm.285453	NM_008502	ENSMUSG00000020536	Llgl1	AI325176|Lgl1|Llglh|Mgl1	lethal giant larvae homolog 1 (Drosophila)	protein-coding
unique_peak2-33582-12-15--0.351224014912361-0.332077462497413	chr11	86651053	86651634	+	0	NA	Intergenic	Intergenic	-30181	NM_026191	67487	Mm.260627	NM_026191	ENSMUSG00000018425	Dhx40	2410016C14Rik|ARG147|DDX40|PAD	DEAH (Asp-Glu-Ala-His) box polypeptide 40	protein-coding
common_peak2-28303-12-15--0.351224014912361-0.332077462497413	chr4	132842539	132843256	+	0	NA	Intergenic	L1MC|LINE|L1	-9192	NR_110978	52174	Mm.244748	NM_025667	ENSMUSG00000028857	Tmem222	5730406H10Rik|AA409341|D4Ertd196e	transmembrane protein 222	protein-coding
common_peak2-26315-5-12--1.40482005414695-1.62698961692433	chr2	32715361	32715928	+	0	NA	Intergenic	ID_B1|SINE|B4	-12887	NM_001113569	20910	Mm.278865	NM_009295	ENSMUSG00000026797	Stxbp1	AI317162|AI326233|MMS10-G|Ms10g|Munc-18a|Munc18-1|N-sec1|Rb-sec1|Sxtbp1|Unc18-1|Unc18h|nsec1	syntaxin binding protein 1	protein-coding
unique_peak2-38539-2-7--1.91745425626332-1.45399745587252	chr7	47112815	47113247	+	0	NA	Intergenic	Intergenic	339895	NM_001004139	70227	Mm.333800	NM_001004139	ENSMUSG00000068959	Zfp619	3000002G13Rik	zinc finger protein 619	protein-coding
common_peak1-15288-11-17--0.661231417190699-0.58239619684445	chr4	41274570	41275091	+	0	NA	Intergenic	RSINE1|SINE|B4	-12896	NM_026893	68970	Mm.28891	NM_026893	ENSMUSG00000028436	Dcaf12	1500001L20Rik|5830424K06Rik|AA420338|AI851081|Wdr40a	DDB1 and CUL4 associated factor 12	protein-coding
common_peak1-18487-44-43-0.362461215931238-0.728039925316326	chr8	84984159	84986272	+	0	NA	Intergenic	Intergenic	-58730	NM_008357	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak1-17122-76-45-1.23838242980627-6.25550971452015	chr6	115479007	115482069	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-14184	NM_199033	381802	Mm.291208	NM_199033	ENSMUSG00000042389	Tsen2	AU067695	tRNA splicing endonuclease 2 homolog (S. cerevisiae)	protein-coding
common_peak1-8626-60-114--0.491198189323844-1.44060810775761	chr10	118867906	118869789	+	0	NA	Intergenic	Intergenic	18347	NR_040578	67081	Mm.72644	NR_040578		1700025F24Rik	-	RIKEN cDNA 1700025F24 gene	ncRNA
common_peak2-19694-51-132--0.980358609898617-4.99700762739219	chr1	59912337	59913970	+	0	NA	intron (NM_007561, intron 9 of 12)	intron (NM_007561, intron 9 of 12)	-56697	NM_001037725	72750	Mm.258250	NM_001037725	ENSMUSG00000041040	Fam117b	2810425F24Rik|6330416D14Rik|Als2cr13	family with sequence similarity 117, member B	protein-coding
unique_peak2-33155-4-5--0.608423014574403-0.909929411522249	chr10	88826972	88827268	+	0	NA	Intergenic	ORR1B1|LTR|MaLR	79592	NM_001284344	237436	Mm.11982	NM_001033331	ENSMUSG00000074802	Gas2l3	8430435B07Rik|Gm240	growth arrest-specific 2 like 3	protein-coding
common_peak1-10402-11-7-0.508693584251613-1.21681515183528	chr13	97510937	97511535	+	0	NA	Intergenic	Intergenic	-70345	NM_008255	15357	Mm.316652	NM_008255	ENSMUSG00000021670	Hmgcr	HMG-CoAR|Red	3-hydroxy-3-methylglutaryl-Coenzyme A reductase	protein-coding
common_peak2-20609-16-10-0.658832023630764-0.699649909729472	chr10	80052339	80052758	+	0	NA	intron (NM_145421, intron 1 of 4)	intron (NM_145421, intron 1 of 4)	538	NM_145421	216169	Mm.29802	NM_145421	ENSMUSG00000003346	Abhd17a	1700013O15Rik|BC005632|D10Bwg1364e|Fam108a	abhydrolase domain containing 17A	protein-coding
unique_peak1-6967-9-4-0.867685311516858-1.36011389749466	chr8	117267057	117267602	+	0	NA	intron (NM_019573, intron 8 of 8)	intron (NM_019573, intron 8 of 8)	303777	NM_019573	80707	Mm.440420	NM_019573	ENSMUSG00000004637	Wwox	5330426P09Rik|9030416C10Rik|WOX1	WW domain-containing oxidoreductase	protein-coding
common_peak1-11052-18-20--0.0793982715504091-0.301029995663976	chr15	54278254	54278987	+	0	NA	intron (NM_173422, intron 3 of 5)	L1Md_T|LINE|L1	36291	NM_173422	239447	Mm.82400	NM_173422	ENSMUSG00000038591	Colec10	CL-L1	collectin sub-family member 10	protein-coding
common_peak2-21400-6-10--0.894033508256995-1.21398586181642	chr11	80818368	80818694	+	0	NA	intron (NM_001034013, intron 1 of 9)	L1_Mus1|LINE|L1	146640	NM_029367	75622	Mm.26988	NM_029367	ENSMUSG00000053184	Spaca3	1700025M08Rik|ALLP17|Lyc3|SLLP1|mSLLP1	sperm acrosome associated 3	protein-coding
unique_peak1-4309-10-1-2.35641534500877-2.57096726280955	chr2	148771875	148772498	+	0	NA	Intergenic	Intergenic	-70982	NM_009976	13010	Mm.4263	NM_009976	ENSMUSG00000027447	Cst3	CysC	cystatin C	protein-coding
common_peak1-18056-15-12-0.311725032414564-0.425539671739611	chr7	145044775	145045411	+	0	NA	Intergenic	MTE2b|LTR|MaLR	415736	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
common_peak1-17092-27-15-0.991545950895236-1.66700866096458	chr6	112948685	112949534	+	0	NA	Intergenic	MER20|DNA|MER1_type	-47212	NM_008188	14911	Mm.781	NM_008188	ENSMUSG00000030264	Thumpd3	AW556087|Gt(ROSA)26asSor|Gtrosa26as	THUMP domain containing 3	protein-coding
unique_peak2-36238-6-8--0.60452689106201-1.03789460276074	chr2	38541256	38541869	+	0	NA	Intergenic	Intergenic	28500	NM_139051	26423	Mm.31387	NM_139051	ENSMUSG00000026751	Nr5a1	Ad4BP|ELP|ELP-3|Ftz-F1|Ftzf1|SF-1|SF1	nuclear receptor subfamily 5, group A, member 1	protein-coding
common_peak2-28329-11-16--0.578769256998726-0.503257505534083	chr4	133967532	133967999	+	0	NA	exon (NM_001285874, exon 5 of 10)	exon (NM_001285874, exon 5 of 10)	8880	NM_001285877	100163	Mm.22116	NM_133880	ENSMUSG00000037366	Pafah2	2310074E22Rik|AI507170	platelet-activating factor acetylhydrolase 2	protein-coding
unique_peak1-652-11-6-0.701338662194009-1.32595962126035	chr10	59431165	59431753	+	0	NA	Intergenic	B3|SINE|B2	-16941	NM_029083	74747	Mm.21697	NM_029083	ENSMUSG00000020108	Ddit4	5830413E08Rik|AA415483|REDD1|Rtp801|dig2	DNA-damage-inducible transcript 4	protein-coding
unique_peak2-38390-4-6--0.830815435910851-0.989110657569874	chr7	19228995	19229353	+	0	NA	Intergenic	ORR1A3-int|LTR|MaLR	12900	NM_027403	72242	Mm.326858	NM_027403	ENSMUSG00000070796	Psg21	1600019C01Rik|1600025N01Rik|1600026N13Rik|cea8	pregnancy-specific glycoprotein 21	protein-coding
common_peak2-27229-10-8-0.186490343566457-1.078512453669	chr3	51661383	51661845	+	0	NA	intron (NM_001004176, intron 1 of 4)	intron (NM_001004176, intron 1 of 4)	196499	NM_174995	211666	Mm.24679	NM_174995	ENSMUSG00000074604	Mgst2	GST2|MGST-II	microsomal glutathione S-transferase 2	protein-coding
common_peak1-15402-45-30-0.906161714957997-2.2696557331197	chr4	83314441	83316164	+	0	NA	intron (NM_001081012, intron 16 of 25)	B2_Mm1t|SINE|B2	143853	NM_001081012	320226	Mm.180032	NM_029117	ENSMUSG00000052407	Ccdc171	4930418J05Rik|4930473A06Rik|A330015D16Rik	coiled-coil domain containing 171	protein-coding
unique_peak1-5074-11-6-0.701338662194009-1.32595962126035	chr4	140685079	140685608	+	0	NA	intron (NM_001277195, intron 1 of 3)	intron (NM_001277195, intron 1 of 3)	10368	NR_102344	213491	Mm.332006	NM_174996	ENSMUSG00000040842	Szrd1	1110022I03|D4Ertd22e	SUZ RNA binding domain containing 1	protein-coding
unique_peak2-38223-8-9--0.316705676939792-1.03275496310833	chr6	115283711	115284187	+	0	NA	Intergenic	L1MA7|LINE|L1	-27290	NM_001127330	19016	Mm.3020	NM_011146	ENSMUSG00000000440	Pparg	Nr1c3|PPAR-gamma|PPAR-gamma2|PPARgamma|PPARgamma2	peroxisome proliferator activated receptor gamma	protein-coding
common_peak2-26143-53-48-0.52626316830072-1.27243322704912	chr2	13572154	13573519	+	0	NA	Intergenic	L1ME1|LINE|L1	76898	NM_011701	22352	Mm.268000	NM_011701	ENSMUSG00000026728	Vim	-	vimentin	protein-coding
common_peak1-13794-12-20--0.743541437691122-0.625923329873571	chr2	38987686	38988309	+	0	NA	intron (NM_178778, intron 3 of 17)	intron (NM_178778, intron 3 of 17)	29758	NR_033526	100042584	Mm.451696	NR_033526		Gm16523	A130054J05Rik	mitochondrial ribosomal protein L40 pseudogene	pseudo
common_peak1-13956-51-56-0.242033811437832-0.514932048590334	chr2	91649081	91650565	+	0	NA	intron (NM_172669, intron 8 of 17)	intron (NM_172669, intron 8 of 17)	79528	NM_001080754	228361	Mm.436667	NM_172669	ENSMUSG00000040506	Ambra1	2310079H06Rik|A130023A14|AA474864|AV021921|D030051N19Rik|mKIAA1736	autophagy/beclin 1 regulator 1	protein-coding
common_peak2-22156-7-5-0.214128329577033-1.01466476204226	chr12	86891996	86892411	+	0	NA	Intergenic	B3|SINE|B2	-47852	NM_001205052	81703	Mm.103560	NM_030887	ENSMUSG00000034271	Jdp2	Jundm2|Jundp2|TIF	Jun dimerization protein 2	protein-coding
unique_peak2-39040-5-16--1.79184317725619-1.61682445937017	chr8	69902705	69903391	+	0	NA	Intergenic	Lx7|LINE|L1	-111609	NM_008673	17960	Mm.14125	NM_008673	ENSMUSG00000025588	Nat1	Nat-1	N-acetyl transferase 1	protein-coding
common_peak2-32036-8-15--0.994777582052429-0.771068449301683	chr9	78177106	78177790	+	0	NA	TTS (NM_205822)	TTS (NM_205822)	1611	NM_205822	382088	Mm.360477	NM_205822	ENSMUSG00000038750	Omt2b	AU018149|C86230|Mosg|OM2b	oocyte maturation, beta	protein-coding
common_peak1-16183-17-12-0.517856620063946-0.647240723060192	chr5	91662095	91662874	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	49618	NR_040428	100503265	Mm.125059	NR_040428		Gm19619	-	predicted gene, 19619	ncRNA
unique_peak1-1451-15-4-1.69023665566829-1.97518968347063	chr12	102730059	102730744	+	0	NA	intron (NM_173023, intron 10 of 26)	L1_Mus1|LINE|L1	87518	NM_173023	271036	Mm.84218	NM_173023	ENSMUSG00000047014	Catsperb	4931410B03|4932415G16Rik	catsper channel auxiliary subunit beta	protein-coding
common_peak2-19579-38-39-0.249524564411168-0.503563708672202	chr1	16103806	16105269	+	0	NA	intron (NM_133832, intron 2 of 5)	intron (NM_133832, intron 2 of 5)	8574	NM_133832	98711	Mm.274376	NM_133832		Rdh10	3110069K09Rik|4921506A21Rik|AI875664|AW549993|D1Ertd762e|m366Asp	retinol dehydrogenase 10 (all-trans)	protein-coding
unique_peak1-1307-18-4-1.99099105634099-2.82951996911245	chr11	120498274	120499069	+	0	NA	intron (NM_144795, intron 7 of 7)	intron (NM_144795, intron 7 of 7)	-3810	NM_010756	17134	Mm.268010	NM_010756		Mafg	AA545192|C630022N07Rik	v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian)	protein-coding
common_peak2-27307-12-9-0.326847890200276-0.459837087125828	chr3	63892423	63893085	+	0	NA	intron (NM_019918, intron 2 of 5)	intron (NM_019918, intron 2 of 5)	7190	NM_019918	56544	Mm.57069	NM_019918	ENSMUSG00000027824	Vmn2r1	Casrl1|EG56544|V2r83	vomeronasal 2, receptor 1	protein-coding
common_peak2-23903-22-24-0.00342791531268016-0.305461879681376	chr16	4623975	4625161	+	0	NA	intron (NM_025571, intron 1 of 4)	CpG	378	NM_025571	66449	Mm.354760	NM_025571	ENSMUSG00000014301	Pam16	2010110I09Rik|AV006767|CGI-136|Magmas|Tim16|Timm16	presequence translocase-asssociated motor 16 homolog (S. cerevisiae)	protein-coding
unique_peak1-3413-10-2-1.77145284428761-2.09384600808989	chr19	5934813	5935405	+	0	NA	Intergenic	Intergenic	-10293	NM_026772	104252	Mm.491103	NM_026772	ENSMUSG00000045664	Cdc42ep2	1110008C05Rik|Borg1|Cep2|D19Bwg1013e	CDC42 effector protein (Rho GTPase binding) 2	protein-coding
unique_peak2-33428-2-8--2.08737925770563-1.65811743852845	chr11	60581440	60581866	+	0	NA	intron (NM_009410, intron 1 of 18)	B3|SINE|B2	9214	NM_009410	21975	Mm.477819	NM_009410	ENSMUSG00000002814	Top3a	-	topoisomerase (DNA) III alpha	protein-coding
common_peak2-32205-24-30--0.160986407619158-0.316008636696545	chr9	120492242	120493199	+	0	NA	Intergenic	Intergenic	6272	NR_073359	76100	Mm.48212	NR_073359	ENSMUSG00000052658	5830454E08Rik	-	RIKEN cDNA 5830454E08 gene	ncRNA
common_peak1-14301-22-15-0.647284105087405-0.849699271740893	chr2	158624715	158625545	+	0	NA	intron (NM_145742, intron 1 of 20)	intron (NM_145742, intron 1 of 20)	4587	NM_001291144	71715	Mm.315652	NM_145742	ENSMUSG00000027655	Dhx35	1200009D07Rik|Ddx35	DEAH (Asp-Glu-Ala-His) box polypeptide 35	protein-coding
common_peak2-23713-25-34--0.26743311159986-0.387290225425543	chr15	89373511	89374404	+	0	NA	intron (NM_021423, intron 19 of 21)	intron (NM_021423, intron 19 of 21)	-24800	NM_013455	11434	Mm.57	NM_013455	ENSMUSG00000022622	Acr	-	acrosin prepropeptide	protein-coding
unique_peak1-6592-11-1-2.50869358425161-2.83420869758413	chr7	144742738	144743264	+	0	NA	Intergenic	Intergenic	113644	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
unique_peak1-145-11-1-2.50869358425161-2.83420869758413	chr1	71735702	71736209	+	0	NA	Intergenic	RMER19C|LTR|ERVK	36046	NR_040308	100042814	Mm.405775	NR_040308	ENSMUSG00000073652	Apol7d	ENSMUSG00000073652|Gm15456|OTTMUSG00000022136	apolipoprotein L 7d	ncRNA
common_peak2-25901-52-88--0.367473440700699-0.801556296744837	chr19	45782697	45783623	+	0	NA	Intergenic	Intergenic	21888	NR_045307	71232	Mm.50944	NR_045307		4933429K18Rik	-	RIKEN cDNA 4933429K18 gene	ncRNA
common_peak1-17001-9-9--0.132314688483142-1.03275496310833	chr6	88984934	88985481	+	0	NA	Intergenic	Intergenic	-60902	NM_175017	232217	Mm.281744	NM_175017	ENSMUSG00000055403	4933427D06Rik	-	RIKEN cDNA 4933427D06 gene	protein-coding
unique_peak2-34159-2-6--1.72480917832092-1.26211192963361	chr13	29638261	29638552	+	0	NA	intron (NM_144536, intron 10 of 15)	intron (NM_144536, intron 10 of 15)	309051	NM_144536	68916	Mm.212227	NM_144536	ENSMUSG00000006191	Cdkal1	1190005B03Rik|6620401C13Rik	CDK5 regulatory subunit associated protein 1-like 1	protein-coding
unique_peak2-37270-0-8--4.01005593191652-2.05605744720049	chr4	115225808	115226244	+	0	NA	Intergenic	L1VL4|LINE|L1	-10228	NM_001252539	666168	Mm.482086	NM_201640	ENSMUSG00000028712	Cyp4a31	-	cytochrome P450, family 4, subfamily a, polypeptide 31	protein-coding
common_peak2-23543-13-13--0.0288828914198356-0.309074325783021	chr15	78581048	78581777	+	0	NA	Intergenic	Intergenic	22463	NM_008595	17305	Mm.149235	NM_008595	ENSMUSG00000018169	Mfng	AW546563	MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase	protein-coding
common_peak1-11547-13-14--0.12841856497075-0.301029995663977	chr16	8637640	8638308	+	0	NA	promoter-TSS (NM_025708)	promoter-TSS (NM_025708)	174	NM_016881	54128	Mm.9699	NM_016881	ENSMUSG00000022711	Pmm2	AI585868|C86848	phosphomannomutase 2	protein-coding
common_peak2-20879-28-28-0.194978124693891-0.390124689062469	chr11	116489791	116490783	+	0	NA	Intergenic	Intergenic	-1954	NM_172572	217344	Mm.89695	NM_172572	ENSMUSG00000020806	Rhbdf2	4732465I17Rik|Rhbdl6	rhomboid 5 homolog 2 (Drosophila)	protein-coding
common_peak1-16690-30-27-0.362320487434269-0.581176766834141	chr6	13870945	13871835	+	0	NA	Intergenic	Intergenic	49821	NR_045995	76311	Mm.367129	NR_045995	ENSMUSG00000097616	1110019D14Rik	-	RIKEN cDNA 1110019D14 gene	ncRNA
common_peak2-24680-9-18--1.05831410703937-0.965105923112245	chr17	42939623	42940321	+	0	NA	intron (NM_009847, intron 16 of 17)	intron (NM_009847, intron 16 of 17)	-60844	NM_001033493	435529	Mm.136350	NM_001033493	ENSMUSG00000057899	Gpr111	PGR20	G protein-coupled receptor 111	protein-coding
common_peak2-30103-116-132-0.438846898008231-1.91096514683922	chr6	135250513	135253545	+	0	NA	Intergenic	ID_B1|SINE|B4	8373	NM_029595	76400	Mm.293018	NM_029595		Pbp2	1700023A18Rik|AI326308|Pebp-2|Pebp2	phosphatidylethanolamine binding protein 2	protein-coding
unique_peak1-2544-8-1-2.00522241794757-2.05605744720049	chr16	23182034	23182503	+	0	NA	Intergenic	RLTR40|LTR|ERVK	35659	NM_009605	11450	Mm.3969	NM_009605	ENSMUSG00000022878	Adipoq	30kDa|APN|Acdc|Acrp30|GBP28|adipo|apM1	adiponectin, C1Q and collagen domain containing	protein-coding
common_peak1-8214-14-39--1.42271193452972-2.70027529094734	chr10	8550033	8550796	+	0	NA	intron (NM_175155, intron 2 of 19)	intron (NM_175155, intron 2 of 19)	55454	NM_175155	70097	Mm.338275	NM_175155	ENSMUSG00000015305	Sash1	1100001C18Rik|2500002E12Rik|A330076K04Rik|mKIAA0790	SAM and SH3 domain containing 1	protein-coding
common_peak2-25837-8-8--0.164702583494742-1.00793137938329	chr19	41445744	41446129	+	0	NA	intron (NM_031376, intron 2 of 16)	L1MA9|LINE|L1	13624	NM_031376	83490	Mm.222266	NM_031376	ENSMUSG00000025017	Pik3ap1	1810044J04Rik|BCAP	phosphoinositide-3-kinase adaptor protein 1	protein-coding
common_peak2-23026-11-11--0.0762689164695427-0.301029995663976	chr14	65331892	65332428	+	0	NA	intron (NM_001081177, intron 3 of 39)	MTB_Mm-int|LTR|MaLR	60792	NM_001081177	16554	Mm.23611	NM_001081177	ENSMUSG00000060012	Kif13b	5330429L19Rik|6030414C01|AI429803|C130021D12Rik|GAKIN	kinesin family member 13B	protein-coding
unique_peak1-7105-8-2-1.42025991722641-1.65811743852845	chr9	43231130	43231650	+	0	NA	Intergenic	Intergenic	112544	NM_023655	72169	Mm.273277	NM_023655	ENSMUSG00000032013	Trim29	1110047J21Rik|2810431N19Rik|4732461M22Rik|AI119726	tripartite motif-containing 29	protein-coding
common_peak1-11379-75-17-2.56914199030097-16.1061563736285	chr15	97247009	97248446	+	0	NA	Intergenic	Intergenic	-170009	NM_001164602	105827	Mm.24005	NM_178114	ENSMUSG00000048218	Amigo2	AI415330|AMIGO-2|AW208913|Ali1	adhesion molecule with Ig like domain 2	protein-coding
common_peak2-22155-3-8--1.58390809140159-1.39487600375387	chr12	86888586	86888857	+	0	NA	Intergenic	Intergenic	-51334	NM_001205052	81703	Mm.103560	NM_030887	ENSMUSG00000034271	Jdp2	Jundm2|Jundp2|TIF	Jun dimerization protein 2	protein-coding
common_peak1-12306-42-22-1.21876737181017-3.32003866131526	chr17	46873221	46874351	+	0	NA	exon (NM_028065, exon 6 of 6)	exon (NM_028065, exon 6 of 6)	-7672	NM_010321	14711	Mm.29395	NM_010321	ENSMUSG00000002769	Gnmt	-	glycine N-methyltransferase	protein-coding
unique_peak2-39052-8-9--0.316705676939792-1.03275496310833	chr8	70629854	70630419	+	0	NA	Intergenic	Intergenic	-131663	NM_177698	234353	Mm.32525	NM_027626	ENSMUSG00000030465	Psd3	4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D	pleckstrin and Sec7 domain containing 3	protein-coding
common_peak1-14983-67-115--0.313569512344577-0.807261277699032	chr3	107695260	107696756	+	0	NA	TTS (NM_133867)	TTS (NM_133867)	-2764	NM_010360	14866	Mm.282351	NM_010360	ENSMUSG00000004032	Gstm5	-	glutathione S-transferase, mu 5	protein-coding
common_peak1-10291-7-8--0.370834171144123-1.00793137938329	chr13	63231769	63232202	+	0	NA	intron (NM_001289926, intron 5 of 15)	L1M5|LINE|L1	-109353	NR_110520	72061	Mm.188105	NM_028079	ENSMUSG00000021458	2010111I01Rik	2300006M17Rik|AP-O|Aopep	RIKEN cDNA 2010111I01 gene	protein-coding
unique_peak1-318-10-4-1.03448725012141-1.5150158574804	chr1	131909778	131910266	+	0	NA	intron (NM_172485, intron 15 of 27)	Lx5|LINE|L1	409554	NM_007827	13137	Mm.436759	NM_007827	ENSMUSG00000026401	Daf2	AI323748|Cd55b|Daf|Daf-TM|TM-DAF	decay accelerating factor 2	protein-coding
common_peak1-7738-21-15-0.569489265266236-0.756118839439552	chr1	89117578	89118631	+	0	NA	intron (NM_001039169, intron 3 of 6)	intron (NM_001039169, intron 3 of 6)	7590	NM_001039169	26987	Mm.227183	NM_023314	ENSMUSG00000026254	Eif4e2	2700069E09Rik|AI036339|AV129531|D0H0S6743E|Eif4el3	eukaryotic translation initiation factor 4E member 2	protein-coding
common_peak1-12979-30-20-0.777357986713112-1.30767018140166	chr19	4113277	4114348	+	0	NA	TTS (NM_016666)	TTS (NM_016666)	7763	NM_001276284	11632	Mm.10433	NM_016666	ENSMUSG00000024847	Aip	AA408703|AW476050|Ara9|D19Bwg1412e|Fkbp16|Xap2	aryl-hydrocarbon receptor-interacting protein	protein-coding
common_peak2-21800-80-84-0.44118483023165-1.35394859712804	chr11	118361420	118363722	+	0	NA	intron (NM_001285438, intron 8 of 13)	intron (NM_001285438, intron 8 of 13)	24297	NM_172573	217364	Mm.473963	NM_172573	ENSMUSG00000033857	Engase	C130099A03|D230014K01Rik	endo-beta-N-acetylglucosaminidase	protein-coding
common_peak1-11596-9-15--0.81038659359578-0.630231561310125	chr16	17282709	17283286	+	0	NA	exon (NM_001001983, exon 49 of 55)	exon (NM_001001983, exon 49 of 55)	6604	NM_177473	224019	Mm.246388	NM_177473	ENSMUSG00000055692	Tmem191c	4933405M22Rik|D16Bwg1494e	transmembrane protein 191C	protein-coding
unique_peak2-37072-1-9--2.94898510510411-2.31132995230379	chr3	145987913	145988282	+	0	NA	Intergenic	Intergenic	53811	NR_033542	100038607	Mm.365888	NR_033542		Gm10636	ENSMUSG00000074175	predicted gene 10636	ncRNA
common_peak2-28230-54-81--0.18446624298835-0.416056689382471	chr4	119538676	119540252	+	0	NA	intron (NM_010657, intron 1 of 8)	ORR1D2|LTR|MaLR	52181	NM_010657	16656	Mm.302758	NM_010657	ENSMUSG00000028634	Hivep3	2900056N03Rik|A130075N07|AI848000|E030045D18Rik|KBP-1|KBP1|Krc|Rc|Schnurri-3|Shn3|Zas3	human immunodeficiency virus type I enhancer binding protein 3	protein-coding
unique_peak2-33783-3-6--1.22133801201688-1.08602067057793	chr11	119786040	119786341	+	0	NA	Intergenic	RSINE1|SINE|B4	11066	NM_001085498	208092	Mm.306673	NM_001085498	ENSMUSG00000025371	Chmp6	2400004G01Rik	charged multivesicular body protein 6	protein-coding
unique_peak2-34998-5-12--1.40482005414695-1.62698961692433	chr15	99649051	99649800	+	0	NA	intron (NM_001113545, intron 4 of 10)	intron (NM_001113545, intron 4 of 10)	1155	NM_023063	65970	Mm.33207	NM_023063	ENSMUSG00000023022	Lima1	Eplin	LIM domain and actin binding 1	protein-coding
unique_peak2-32557-7-11--0.785871670422967-1.21681515183528	chr1	75024988	75025597	+	0	NA	intron (NM_029342, intron 3 of 5)	intron (NM_029342, intron 3 of 5)	-27067	NM_010544	16147	Mm.439736	NM_010544	ENSMUSG00000006538	Ihh	-	Indian hedgehog	protein-coding
common_peak1-18292-31-29-0.318348075204605-0.512115693271959	chr8	45410038	45411135	+	0	NA	Intergenic	Lx2|LINE|L1	-624976	NM_001081286	14107	Mm.27365	NM_001081286	ENSMUSG00000070047	Fat1	2310038E12Rik|AU023433|Fath|mFat1	FAT tumor suppressor homolog 1 (Drosophila)	protein-coding
common_peak1-10289-11-9-0.186765489364251-0.344532117358383	chr13	63164312	63164878	+	0	NA	intron (NM_001289926, intron 4 of 15)	intron (NM_001289926, intron 4 of 15)	98342	NM_001289924	72061	Mm.188105	NM_028079	ENSMUSG00000021458	2010111I01Rik	2300006M17Rik|AP-O|Aopep	RIKEN cDNA 2010111I01 gene	protein-coding
unique_peak2-35784-4-6--0.830815435910851-0.989110657569874	chr18	54926164	54926584	+	0	NA	Intergenic	GA-rich|Low_complexity|Low_complexity	154976	NR_045400	328957	Mm.402781	NR_045400		9330117O12Rik	9330117O12	RIKEN cDNA 9330117O12 gene	ncRNA
common_peak2-27067-17-23--0.366666162516118-0.383878263347744	chr2	181837366	181838223	+	0	NA	Intergenic	Intergenic	111863	NM_001205282	672125	Mm.489571	NM_001205282	ENSMUSG00000053277	Gm14496	OTTMUSG00000016837	predicted gene 14496	protein-coding
unique_peak2-39295-5-10--1.16381195464315-1.33892459842472	chr8	123284055	123284640	+	0	NA	Intergenic	Intergenic	24071	NM_008320	15900	Mm.334861	NM_008320	ENSMUSG00000041515	Irf8	AI893568|ICSBP|IRF-8|Icsbp1|Myls	interferon regulatory factor 8	protein-coding
common_peak1-17748-21-44--0.922363831063439-1.59745120326141	chr7	81828863	81830006	+	0	NA	Intergenic	Intergenic	-129768	NM_001038643	108116	Mm.425467	NM_023908	ENSMUSG00000025790	Slco3a1	5830414C08Rik|Anr1|MJAM|OATP-D|R75096|Slc21a11	solute carrier organic anion transporter family, member 3a1	protein-coding
unique_peak1-4801-12-4-1.32684789020028-2.04196296489515	chr3	135682033	135682673	+	0	NA	Intergenic	L1Md_T|LINE|L1	-179120	NR_040540	71038	Mm.410798	NR_040540		4933401H06Rik	-	RIKEN cDNA 4933401H06 gene	ncRNA
unique_peak2-32909-6-7--0.434601889619698-0.97990265578305	chr10	21046077	21046530	+	0	NA	intron (NR_045352, intron 1 of 3)	intron (NR_045352, intron 1 of 3)	15558	NR_045352	73990	Mm.399240	NR_045352		4930455C13Rik	-	RIKEN cDNA 4930455C13 gene	ncRNA
unique_peak1-341-8-4-0.683294323060208-1.21878474469819	chr1	134556496	134557008	+	0	NA	intron (NM_182716, intron 2 of 29)	B1F2|SINE|Alu	-17317	NM_001160316	269116	Mm.326702	NM_182716	ENSMUSG00000026442	Nfasc	AA387016|D430023G06Rik|NF|mKIAA0756	neurofascin	protein-coding
common_peak1-9112-14-15--0.100783839642355-0.301029995663982	chr11	72689844	72690632	+	0	NA	intron (NM_001045536, intron 30 of 54)	intron (NM_001045536, intron 30 of 54)	80510	NM_001045536	195018	Mm.272030	NM_001045536	ENSMUSG00000055670	Zzef1	8430405D05Rik|BC051585|C130099L13Rik|C85424|mKIAA0399	zinc finger, ZZ-type with EF hand domain 1	protein-coding
unique_peak2-33664-3-7--1.41398308995928-1.23214870625617	chr11	100770131	100770605	+	0	NA	intron (NM_011486, intron 2 of 23)	intron (NM_011486, intron 2 of 23)	30457	NM_213660	20848	Mm.249934	NM_011486	ENSMUSG00000004040	Stat3	1110034C02Rik|AW109958|Aprf	signal transducer and activator of transcription 3	protein-coding
unique_peak2-37573-4-5--0.608423014574403-0.909929411522249	chr5	35673601	35673873	+	0	NA	Intergenic	Intergenic	-30465	NR_046060	74429	Mm.399502	NR_046060		4930478P22Rik	4933405A14Rik	RIKEN cDNA 4930478P22 gene	ncRNA
common_peak1-17393-230-220-0.896718500682741-13.0544101485372	chr7	144746518	144752682	+	0	NA	Intergenic	Intergenic	120243	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
unique_peak1-4062-8-0-3.00522241794757-2.70926996097583	chr2	61295007	61295579	+	0	NA	Intergenic	(CAAA)n|Simple_repeat|Simple_repeat	-121350	NM_011529	21353	Mm.244393	NM_011529	ENSMUSG00000064289	Tank	C86182|E430026L09Rik|I-TRAF	TRAF family member-associated Nf-kappa B activator	protein-coding
unique_peak1-17-17-4-1.89636824331768-2.60953805094651	chr1	173980967	173981725	+	0	NA	Intergenic	Intergenic	6381	NM_010916	18071	Mm.2474	NM_010916	ENSMUSG00000051251	Nhlh1	Hen1|Nscl|Tal2|bHLHa35	nescient helix loop helix 1	protein-coding
common_peak2-24070-34-49--0.261787662773458-0.418071017975767	chr16	30510488	30511362	+	0	NA	Intergenic	CpG	39739	NM_172614	224090	Mm.241459	NM_172614		Tmem44	1700007N03Rik|9330161C17Rik|B230220N21	transmembrane protein 44	protein-coding
unique_peak2-34046-2-6--1.72480917832092-1.26211192963361	chr12	112976531	112976907	+	0	NA	intron (NM_001163388, intron 4 of 5)	intron (NM_001163388, intron 4 of 5)	-20341	NM_008450	16593	Mm.278357	NM_008450	ENSMUSG00000021288	Klc1	AI874768|Kns2	kinesin light chain 1	protein-coding
common_peak1-16728-10-6-0.549060422951165-1.21398586181642	chr6	30459608	30460164	+	0	NA	promoter-TSS (NM_178625)	promoter-TSS (NM_178625)	37	NM_027073	75647	Mm.46117	NM_027073	ENSMUSG00000029784	Ssmem1	1700016K02Rik|1700025E21Rik	serine-rich single-pass membrane protein 1	protein-coding
common_peak1-10757-16-13-0.310908720210457-0.417187467413082	chr14	70159613	70160374	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-7286	NM_020275	21933	Mm.193430	NM_020275	ENSMUSG00000022074	Tnfrsf10b	DR5|KILLER|Ly98|MK|TRAILR2|TRICK2A|TRICK2B|TRICKB	tumor necrosis factor receptor superfamily, member 10b	protein-coding
unique_peak2-39254-1-5--2.2120195109379-1.32905871926422	chr8	117423150	117423546	+	0	NA	intron (NM_019573, intron 8 of 8)	intron (NM_019573, intron 8 of 8)	459796	NM_019573	80707	Mm.440420	NM_019573	ENSMUSG00000004637	Wwox	5330426P09Rik|9030416C10Rik|WOX1	WW domain-containing oxidoreductase	protein-coding
unique_peak1-4822-9-1-2.18961340640422-2.31132995230379	chr3	144764398	144764904	+	0	NA	Intergenic	Intergenic	-2646	NM_178697	229933	Mm.331420	NM_178697	ENSMUSG00000036960	Clca5	4732440A06|AI586120|Clca2	chloride channel calcium activated 5	protein-coding
unique_peak1-554-12-5-1.06381348436648-1.78669045979184	chr1	193514346	193514933	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-27264	NM_172266	226856	Mm.277958	NM_172266	ENSMUSG00000026623	Lpgat1	AI649174|AW112037|BC013667	lysophosphatidylglycerol acyltransferase 1	protein-coding
common_peak2-23298-43-46-0.227974333846065-0.475408985215012	chr15	34238069	34239086	+	0	NA	intron (NM_016762, intron 1 of 18)	intron (NM_016762, intron 1 of 18)	2141	NM_016762	17181	Mm.396856	NM_016762	ENSMUSG00000022324	Matn2	Crtm2|matrilin-2	matrilin 2	protein-coding
common_peak1-13559-9-9--0.132314688483142-1.03275496310833	chr2	6129447	6130121	+	0	NA	intron (NM_024208, intron 1 of 4)	intron (NM_024208, intron 1 of 4)	4256	NM_024208	67856	Mm.38342	NM_024208	ENSMUSG00000039063	Echdc3	2310005D12Rik|AI662097	enoyl Coenzyme A hydratase domain containing 3	protein-coding
common_peak1-11267-21-17-0.399564263823923-0.561823156887258	chr15	81511512	81512406	+	0	NA	intron (NM_145993, intron 8 of 16)	B1_Mus2|SINE|Alu	15758	NM_001164320	214685	Mm.393287	NM_001164320	ENSMUSG00000063765	Chadl	AY100452|D930017K21Rik	chondroadherin-like	protein-coding
common_peak1-15202-10-24--1.28744084476596-1.59083646988122	chr4	12140345	12140831	+	0	NA	Intergenic	L1Md_A|LINE|L1	-41426	NM_026558	68099	Mm.25340	NM_026558	ENSMUSG00000028218	Fam92a	6720467C03Rik|Fam92a1	family with sequence similarity 92, member A	protein-coding
unique_peak1-5314-7-2-1.21412832957703-1.45399745587252	chr5	77364594	77365055	+	0	NA	intron (NM_172146, intron 1 of 10)	RLTR4_MM-int|LTR|ERV1	-15612	NM_025939	67054	Mm.182931	NM_025939	ENSMUSG00000029247	Paics	2610511I09Rik|ADE2H1|AIRC|PAIS	phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase	protein-coding
common_peak2-20676-19-25--0.297752391479405-0.376654945067947	chr10	86685052	86686044	+	0	NA	intron (NM_029685, intron 4 of 5)	intron (NM_029685, intron 4 of 5)	164757	NM_029685	76640	Mm.78423	NM_029685	ENSMUSG00000047129	1700113H08Rik	-	RIKEN cDNA 1700113H08 gene	protein-coding
common_peak2-26781-16-20--0.274053780510699-0.353907621462756	chr2	144556211	144556739	+	0	NA	intron (NM_025314, intron 4 of 5)	intron (NM_025314, intron 4 of 5)	-92927	NM_025490	66328	Mm.45377	NM_025490	ENSMUSG00000027431	Scp2d1	1700010M22Rik	SCP2 sterol-binding domain containing 1	protein-coding
common_peak2-26636-17-11-0.633333837483882-0.769930178837768	chr2	119350553	119351001	+	0	NA	intron (NM_172857, intron 10 of 12)	intron (NM_172857, intron 10 of 12)	22586	NM_172857	241624	Mm.212773	NM_172857	ENSMUSG00000048647	Exd1	4932702D22Rik|Exdl1	exonuclease 3'-5' domain containing 1	protein-coding
common_peak2-30037-15-14-0.105274154947137-0.330004445983672	chr6	125493929	125494547	+	0	NA	Intergenic	Intergenic	-8728	NM_011708	22371	Mm.22339	NM_011708	ENSMUSG00000001930	Vwf	6820430P06Rik|AI551257|B130011O06Rik|C630030D09|F8VWF|VWD	Von Willebrand factor homolog	protein-coding
unique_peak1-4930-7-1-1.79909083029819-1.80617997398389	chr4	59457877	59458315	+	0	NA	Intergenic	Intergenic	-6591	NM_001163288	634731	Mm.483589	NM_001163288	ENSMUSG00000038578	Susd1	A530080P10|Gm12528|OTTMUSG00000007332	sushi domain containing 1	protein-coding
unique_peak2-38671-4-7--1.02346051385325-1.09384600808989	chr7	99381525	99381855	+	0	NA	intron (NM_001243046, intron 4 of 14)	intron (NM_001243046, intron 4 of 14)	-1790	NM_001243047	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
common_peak1-18795-15-11-0.4272022498345-0.503257505534083	chr9	44334852	44335613	+	0	NA	promoter-TSS (NM_007551)	promoter-TSS (NM_007551)	-728	NM_007551	12145	Mm.6246	NM_007551	ENSMUSG00000047880	Cxcr5	Blr1|CXC-R5|CXCR-5|Gpcr6|MDR15	chemokine (C-X-C motif) receptor 5	protein-coding
common_peak1-18019-11-12--0.191746133889479-0.310474156842889	chr7	141475864	141476361	+	0	NA	intron (NM_001081331, intron 5 of 7)	L1MA9|LINE|L1	-59332	NM_007400	11489	Mm.439714	NM_007400	ENSMUSG00000054555	Adam12	Mltna|mKIAA4001	a disintegrin and metallopeptidase domain 12 (meltrin alpha)	protein-coding
common_peak1-12335-38-85--0.854812095403568-2.56593925009413	chr17	53566759	53567867	+	0	NA	intron (NM_172497, intron 6 of 12)	intron (NM_172497, intron 6 of 12)	35333	NM_172497	211482	Mm.60887	NM_172497	ENSMUSG00000023931	Efhb	4921525D22Rik	EF hand domain family, member B	protein-coding
unique_peak1-4716-8-0-3.00522241794757-2.70926996097583	chr3	104093292	104093776	+	0	NA	Intergenic	Intergenic	-69205	NM_001159354	99470	Mm.264849	NM_133853	ENSMUSG00000052539	Magi3	4732496O19Rik|6530407C02Rik|AA407180|AI120132|mKIAA1634	membrane associated guanylate kinase, WW and PDZ domain containing 3	protein-coding
unique_peak2-38214-3-5--0.998945590680433-0.96108193396963	chr6	114839407	114839769	+	0	NA	intron (NM_177683, intron 2 of 4)	B3|SINE|B2	32182	NM_177683	232334	Mm.268357	NM_177683		Vgll4	BC048841|VGL-4	vestigial like 4 (Drosophila)	protein-coding
unique_peak2-34040-5-12--1.40482005414695-1.62698961692433	chr12	112728482	112729048	+	0	NA	Intergenic	B4|SINE|B4	-4731	NM_001033248	212539	Mm.81916	NM_001033248	ENSMUSG00000010529	Gm266	-	predicted gene 266	protein-coding
unique_peak2-38649-5-7--0.704380336005853-1.01466476204226	chr7	92454329	92454751	+	0	NA	Intergenic	Intergenic	-68326	NM_001105181	620697	Mm.389945	NM_001105181	ENSMUSG00000096861	Vmn2r68	EG620697|Vmn2r68-ps	vomeronasal 2, receptor 68	protein-coding
common_peak1-17994-24-20-0.400892479988956-0.591915184368645	chr7	139273325	139274189	+	0	NA	intron (NM_018867, intron 4 of 13)	L2c|LINE|L2	72667	NM_018867	55987	Mm.471654	NM_018867	ENSMUSG00000030862	Cpxm2	4632435C11Rik|CPX-2|Cpx2	carboxypeptidase X 2 (M14 family)	protein-coding
unique_peak1-3152-12-4-1.32684789020028-2.04196296489515	chr18	37819540	37820136	+	0	NA	intron (NM_001301259, intron 1 of 3)	intron (NM_001301259, intron 1 of 3)	-1761	NM_033584	93709	Mm.247203	NM_033584		Pcdhga1	-	protocadherin gamma subfamily A, 1	protein-coding
common_peak1-11474-18-13-0.505564229170747-0.625923329873571	chr15	102018260	102018798	+	0	NA	intron (NM_144942, intron 3 of 14)	intron (NM_144942, intron 3 of 14)	945	NM_144942	246277	Mm.296382	NM_144942	ENSMUSG00000023044	Csad	Csd	cysteine sulfinic acid decarboxylase	protein-coding
common_peak2-31909-12-10-0.189344366450341-0.386243247519795	chr9	59652978	59653547	+	0	NA	intron (NM_173018, intron 8 of 43)	B1_Mur2|SINE|Alu	54281	NM_173018	270163	Mm.249545	NM_173018	ENSMUSG00000039585	Myo9a	4732465J09Rik|C130068I12Rik|C230003M11	myosin IXa	protein-coding
common_peak1-18947-77-95-0.199564078834841-0.539575460195755	chr9	48494561	48496055	+	0	NA	intron (NM_001033324, intron 4 of 6)	intron (NM_001033324, intron 4 of 6)	-82126	NM_010924	18113	Mm.8362	NM_010924	ENSMUSG00000032271	Nnmt	-	nicotinamide N-methyltransferase	protein-coding
common_peak2-28221-47-63--0.0651585752334523-0.308035049112909	chr4	118543311	118544948	+	0	NA	Intergenic	Intergenic	2741	NM_001011856	258159	Mm.388910	NM_001011856	ENSMUSG00000073769	Olfr1331	MOR259-3P	olfactory receptor 1331	protein-coding
unique_peak1-4164-9-2-1.60465090568306-1.87199725847353	chr2	108640059	108640611	+	0	NA	Intergenic	L1Md_F2|LINE|L1	478112	NM_029790	76894	Mm.330451	NM_029790	ENSMUSG00000057234	Mettl15	0610027B03Rik|AI303697|AW049952|Mett5d1	methyltransferase like 15	protein-coding
unique_peak2-35758-9-11--0.395349094316936-0.344532117358383	chr18	39700490	39701216	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-53954	NM_008173	14815	Mm.129481	NM_008173	ENSMUSG00000024431	Nr3c1	GR|Grl-1|Grl1	nuclear receptor subfamily 3, group C, member 1	protein-coding
unique_peak2-34010-2-4--1.23938235115068-0.931118710592187	chr12	102327011	102327291	+	0	NA	TTS (NR_038047)	TTS (NR_038047)	-5239	NM_001160214	68734	Mm.87077	NM_211355	ENSMUSG00000041846	Smek1	1110034C04Rik|BC064465|mKIAA2010	SMEK homolog 1, suppressor of mek1 (Dictyostelium)	protein-coding
common_peak1-18279-80-170--0.567276748516546-2.62036193244512	chr8	40510635	40512698	+	0	NA	Intergenic	Intergenic	128332	NR_044988	621335	Mm.208080	NR_044988		Gm6213	EG621335	predicted gene 6213	ncRNA
unique_peak1-1498-12-3-1.64877598508764-2.36932189928148	chr13	111295854	111296529	+	0	NA	Intergenic	(CATA)n|Simple_repeat|Simple_repeat	110939	NM_152804	20620	Mm.380	NM_152804	ENSMUSG00000021701	Plk2	Snk	polo-like kinase 2	protein-coding
common_peak2-24709-24-29--0.113680692840802-0.304839791830752	chr17	46247880	46248829	+	0	NA	intron (NM_026768, intron 1 of 5)	intron (NM_026768, intron 1 of 5)	401	NM_026768	68565	Mm.287443	NM_026768	ENSMUSG00000023967	Mrps18a	1110004O20Rik|C79712	mitochondrial ribosomal protein S18A	protein-coding
common_peak1-14714-62-135--0.676711382448254-2.79030669339515	chr3	79180736	79182601	+	0	NA	intron (NM_001142953, intron 1 of 4)	L1MA4|LINE|L1	32370	NM_001142953	100233207	Mm.373801	NM_001142953	ENSMUSG00000091685	Gm17359	-	predicted gene, 17359	protein-coding
unique_peak2-34170-0-5--3.42509343119537-1.32905871926422	chr13	32478854	32479230	+	0	NA	Intergenic	Intergenic	-48629	NM_146041	218138	Mm.247143	NM_146041	ENSMUSG00000038372	Gmds	BC031788|C87208	GDP-mannose 4, 6-dehydratase	protein-coding
common_peak2-23880-15-29--0.894725845052863-1.1282783422172	chr16	17759536	17760463	+	0	NA	intron (NM_145479, intron 1 of 6)	CpG	285	NM_145479	224023	Mm.282807	NM_145479	ENSMUSG00000022750	Klhl22	2610318I18Rik|Kelchl	kelch-like 22	protein-coding
common_peak2-20509-35-40-0.0738182538444203-0.324581211600972	chr10	59643047	59643937	+	0	NA	TTS (NM_016803)	TTS (NM_016803)	38516	NM_016803	53374	Mm.12866	NM_016803	ENSMUSG00000057337	Chst3	C6ST|C6ST-1|GST-0	carbohydrate (chondroitin 6/keratan) sulfotransferase 3	protein-coding
common_peak1-8057-11-8-0.338768582809301-1.14218153353838	chr1	172502754	172503280	+	0	NA	intron (NM_001109985, intron 1 of 9)	intron (NM_001109985, intron 1 of 9)	-15776	NM_027528	70729	Mm.487078	NM_027528	ENSMUSG00000038473	Nos1ap	6330408P19Rik|Capon	nitric oxide synthase 1 (neuronal) adaptor protein	protein-coding
unique_peak2-32574-6-7--0.434601889619698-0.97990265578305	chr1	86504079	86504613	+	0	NA	Intergenic	Intergenic	991039	NM_030194	109032	Mm.335802	NM_030194	ENSMUSG00000070034	Sp110	5031415C07Rik|52kDa|5830484A20Rik|ENSMUSG00000075603|Ifi75|Ipr1	Sp110 nuclear body protein	protein-coding
common_peak1-11941-10-8-0.186490343566457-1.078512453669	chr17	3418286	3418934	+	0	NA	intron (NM_001122998, intron 3 of 26)	intron (NM_001122998, intron 3 of 26)	21403	NM_011878	24001	Mm.137134	NM_011878	ENSMUSG00000023800	Tiam2	3000002F19Rik|STEF|mKIAA2016	T cell lymphoma invasion and metastasis 2	protein-coding
unique_peak1-1567-20-5-1.90311228387004-2.81016724606745	chr13	30336254	30337051	+	0	NA	intron (NM_153546, intron 12 of 12)	RSINE1|SINE|B4	-91573	NM_177322	11607	Mm.35062	NM_177322	ENSMUSG00000049115	Agtr1a	1810074K20Rik|AG2S|AI551199|AT1|AT1a|AT2R1|AT2R1A|Agtr-1a|Agtr1|Angtr-1a	angiotensin II receptor, type 1a	protein-coding
common_peak1-14744-7-8--0.370834171144123-1.00793137938329	chr3	87509254	87509775	+	0	NA	intron (NM_001003912, intron 13 of 39)	Lx|LINE|L1	43031	NM_028971	74485	Mm.474494	NM_028971	ENSMUSG00000023084	Lrrc71	4933430H15Rik	leucine rich repeat containing 71	protein-coding
unique_peak2-37134-0-6--3.64748585253182-1.56314192529759	chr4	19563859	19564106	+	0	NA	intron (NR_074089, intron 15 of 23)	Lx9|LINE|L1	61769	NM_025476	66302	Mm.440686	NM_025476	ENSMUSG00000028229	Rmdn1	Fam82b|RMD-1	regulator of microtubule dynamics 1	protein-coding
common_peak2-23730-32-35-0.109167017777348-0.348003640999429	chr15	95828713	95829561	+	0	NA	Intergenic	Intergenic	80846	NR_003627	402773	Mm.210567	NM_001033483		D030018L15Rik	-	nuclear receptor coactivator 2 pseudogene	pseudo
unique_peak1-4944-13-1-2.77847203063777-3.64038867156802	chr4	89351368	89351827	+	0	NA	Intergenic	Intergenic	-3292	NM_175647	242523	Mm.130167	NM_175647	ENSMUSG00000043753	Dmrta1	Dmrt4	doublesex and mab-3 related transcription factor like family A1	protein-coding
unique_peak1-5375-14-6-1.09186123830004-1.16633110333236	chr5	99236148	99236802	+	0	NA	Intergenic	Intergenic	-46983	NM_173404	110075	Mm.209571	NM_173404	ENSMUSG00000029335	Bmp3	9130206H07|9530029I04Rik	bone morphogenetic protein 3	protein-coding
unique_peak1-3141-13-4-1.45654393575041-2.23384849113406	chr18	36412290	36412847	+	0	NA	Intergenic	B1_Mur3|SINE|Alu	-28248	NM_008989	19290	Mm.231802	NM_008989		Pura	CAGER-1|Pur-alpha|ssCRE-BP	purine rich element binding protein A	protein-coding
common_peak1-10173-17-28--0.639684656922534-0.677583764578261	chr13	38959950	38960695	+	0	NA	Intergenic	Lx8|LINE|L1	92084	NM_001170430	108652	Mm.255506	NM_134060	ENSMUSG00000021432	Slc35b3	4921526O06Rik|AI428480|CGI-19|PABST2|PAPST2	solute carrier family 35, member B3	protein-coding
unique_peak1-1135-15-9-0.690236655668294-0.732381977911291	chr11	96004557	96005358	+	0	NA	intron (NM_172799, intron 7 of 14)	intron (NM_172799, intron 7 of 14)	9857	NM_172799	237930	Mm.249912	NM_172799	ENSMUSG00000038756	Ttll6	4932418K24Rik|D11Moh43e|D11Moh44e|t8130b59	tubulin tyrosine ligase-like family, member 6	protein-coding
unique_peak1-1897-7-0-2.79909083029819-2.40823996531185	chr14	65759721	65760193	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-43014	NM_018788	54616	Mm.103748	NM_018788	ENSMUSG00000021978	Extl3	2900009G18Rik|AU040105|Ext1l|mKIAA0519	exostoses (multiple)-like 3	protein-coding
common_peak1-10219-34-23-0.79710602628011-1.52482195715361	chr13	49580732	49582270	+	0	NA	intron (NM_025495, intron 5 of 7)	intron (NM_025495, intron 5 of 7)	-18678	NM_001012324	407800	Mm.386931	NM_001012324	ENSMUSG00000043631	Ecm2	9030618O22Rik|BC065151|tenonectin	extracellular matrix protein 2, female organ and adipocyte specific	protein-coding
unique_peak2-36008-1-5--2.2120195109379-1.32905871926422	chr19	38482004	38482250	+	0	NA	Intergenic	Intergenic	11657	NM_175507	240660	Mm.262085	NM_175507	ENSMUSG00000044026	Slc35g1	AA590464|D330039I19Rik|Tmem20	solute carrier family 35, member G1	protein-coding
common_peak2-20109-22-32--0.397110014271049-0.488172498216822	chr1	161034098	161035036	+	0	NA	Intergenic	Intergenic	-127890	NM_011931	26374	Mm.328135	NM_011931	ENSMUSG00000040782	Rfwd2	AI316802|C80879|Cop1	ring finger and WD repeat domain 2	protein-coding
unique_peak2-36052-1-6--2.43441193227435-1.56314192529759	chr19	46655308	46655644	+	0	NA	intron (NM_053196, intron 1 of 11)	MTE-int|LTR|MaLR	7621	NM_053196	94279	Mm.296837	NM_053196	ENSMUSG00000025036	Sfxn2	C79732|F630107H02Rik	sideroflexin 2	protein-coding
unique_peak1-7029-10-2-1.77145284428761-2.09384600808989	chr8	126708674	126709238	+	0	NA	Intergenic	(CAGAGA)n|Simple_repeat|Simple_repeat	-46338	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
unique_peak2-39627-3-5--0.998945590680433-0.96108193396963	chr9	96364581	96364893	+	0	NA	Intergenic	Intergenic	14277	NM_011279	19823	Mm.28235	NM_011279	ENSMUSG00000051234	Rnf7	Rbx2|SAG	ring finger protein 7	protein-coding
unique_peak1-3933-8-2-1.42025991722641-1.65811743852845	chr2	27405229	27405722	+	0	NA	Intergenic	B1_Mm|SINE|Alu	34808	NM_080848	140858	Mm.28265	NM_080848	ENSMUSG00000026917	Wdr5	2410008O07Rik|AA408785|AA960360|Big|Big-3	WD repeat domain 5	protein-coding
common_peak2-23116-14-7-0.899216160357645-0.947446088118041	chr14	79533993	79534512	+	0	NA	intron (NM_027906, intron 37 of 44)	intron (NM_027906, intron 37 of 44)	112922	NM_001033215	105590	Mm.486536	NM_001033215	ENSMUSG00000071262	Zfp957	AU017455	zinc finger protein 957	protein-coding
common_peak2-25094-18-26--0.441968350935117-0.471456499375593	chr18	36492245	36493266	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-15523	NM_001081365	66060	Mm.272527	NM_001081365		Cystm1	0610010O12Rik	cysteine-rich transmembrane module containing 1	protein-coding
unique_peak2-37198-8-11--0.579740082773585-1.14218153353838	chr4	59336195	59336773	+	0	NA	intron (NM_001163288, intron 15 of 16)	intron (NM_001163288, intron 15 of 16)	63561	NR_105031	101055769	Mm.421401	NR_105031		LOC101055769	-	uncharacterized LOC101055769	ncRNA
common_peak2-27674-9-16--0.897849434846119-0.732381977911291	chr3	116507595	116508093	+	0	NA	intron (NM_001081326, intron 2 of 33)	intron (NM_001081326, intron 2 of 33)	3240	NM_001081326	77559	Mm.237099	NM_001081326	ENSMUSG00000033400	Agl	1110061O17Rik|9430004C13Rik|9630046L06Rik|AI850929|C77197	amylo-1,6-glucosidase, 4-alpha-glucanotransferase	protein-coding
common_peak1-12791-62-31-1.41075145880208-5.97620393694059	chr18	64341173	64343379	+	0	NA	intron (NR_045366, intron 2 of 5)	intron (NR_045366, intron 2 of 5)	-71737	NM_009182	20451	Mm.252110	NM_009182	ENSMUSG00000056812	St8sia3	AI847333|ST8SiaIII|Siat8c	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	protein-coding
unique_peak2-34150-0-5--3.42509343119537-1.32905871926422	chr13	24548680	24549182	+	0	NA	intron (NM_001284520, intron 10 of 14)	intron (NM_001284520, intron 10 of 14)	41940	NM_001284520	12763	Mm.8396	NM_007717	ENSMUSG00000016756	Cmah	-	cytidine monophospho-N-acetylneuraminic acid hydroxylase	protein-coding
common_peak1-14855-9-20--1.20270401637454-1.23014042908325	chr3	95054705	95055159	+	0	NA	5' UTR (NM_134253, exon 1 of 10)	5' UTR (NM_134253, exon 1 of 10)	183	NM_001168356	171388	Mm.331209	NM_134253	ENSMUSG00000028115	Bnipl	1700128A13Rik|BNIP-S|BNIPL1|BNIPL2|PP73|PP753	BCL2/adenovirus E1B 19kD interacting protein like	protein-coding
unique_peak2-33877-3-9--1.73591118484664-1.57096726280955	chr12	27491789	27492258	+	0	NA	Intergenic	Intergenic	307837	NR_045052	100504347	Mm.130500	NR_045052		Gm20187	-	predicted gene, 20187	ncRNA
common_peak1-11132-125-46-2.06923652738191-22.2457012688078	chr15	67145193	67147877	+	0	NA	intron (NR_045140, intron 5 of 8)	intron (NR_045140, intron 5 of 8)	88204	NR_045140	69334	Mm.63770	NR_045140		1700012I11Rik	-	RIKEN cDNA 1700012I11 gene	ncRNA
common_peak1-11707-17-11-0.633333837483882-0.769930178837768	chr16	32099023	32099757	+	0	NA	promoter-TSS (NM_025892)	promoter-TSS (NM_025892)	423	NM_001111025	72084	Mm.37613	NM_024464	ENSMUSG00000023791	Pigx	2010319C14Rik|PIG-X	phosphatidylinositol glycan anchor biosynthesis, class X	protein-coding
common_peak1-11297-37-42-0.0997283167837208-0.340524918943711	chr15	83472516	83474182	+	0	NA	intron (NM_001271473, intron 4 of 19)	intron (NM_001271473, intron 4 of 19)	-47762	NM_183017	223723	Mm.46778	NM_183017	ENSMUSG00000016757	Ttll12	BC055368|D430005B17	tubulin tyrosine ligase-like family, member 12	protein-coding
unique_peak1-2664-8-5-0.420259917226415-1.10484139239135	chr16	55503936	55504451	+	0	NA	Intergenic	L2|LINE|L2	-220843	NM_178720	239852	Mm.245045	NM_178720	ENSMUSG00000064310	Zpld1	9430016A21Rik	zona pellucida like domain containing 1	protein-coding
unique_peak2-38232-3-5--0.998945590680433-0.96108193396963	chr6	117863038	117863375	+	0	NA	intron (NM_001166428, intron 1 of 3)	intron (NM_001166428, intron 1 of 3)	-4106	NM_001166427	98758	Mm.422979	NM_133834	ENSMUSG00000042079	Hnrnpf	4833420I20Rik|AA407306|Hnrpf	heterogeneous nuclear ribonucleoprotein F	protein-coding
unique_peak1-2901-10-1-2.35641534500877-2.57096726280955	chr17	45726316	45726926	+	0	NA	intron (NM_001199116, intron 5 of 12)	intron (NM_001199116, intron 5 of 12)	2721	NM_022880	63959	Mm.29744	NM_022880	ENSMUSG00000023942	Slc29a1	1200014D21Rik|AA407560|ENT1	solute carrier family 29 (nucleoside transporters), member 1	protein-coding
common_peak2-21942-12-24--0.995080204687086-1.0220094258199	chr12	29960646	29961629	+	0	NA	Intergenic	Intergenic	-252112	NM_001093775	17933	Mm.253067	NM_008666	ENSMUSG00000061911	Myt1l	2900046C06Rik|2900093J19Rik|C630034G21Rik|Nztf1|Pmng1|Png-1|mKIAA1106	myelin transcription factor 1-like	protein-coding
unique_peak1-3308-7-1-1.79909083029819-1.80617997398389	chr18	78132911	78133334	+	0	NA	Intergenic	Lx3B|LINE|L1	-2084	NM_001195633	100502841	Mm.297782	NM_001195633	ENSMUSG00000039840	Epg5	4732475F16|5430411K18Rik|AI661957|AW456499|mKIAA1632	ectopic P-granules autophagy protein 5 homolog (C. elegans)	protein-coding
unique_peak2-34678-4-8--1.19338551529556-1.21878474469819	chr15	8279764	8280165	+	0	NA	intron (NM_027707, intron 21 of 46)	intron (NM_027707, intron 21 of 46)	114499	NM_027707	71175	Mm.240329	NM_027707	ENSMUSG00000022141	Nipbl	Idn3	Nipped-B homolog (Drosophila)	protein-coding
unique_peak2-36340-4-9--1.34538860874061-1.36011389749466	chr2	91953623	91954049	+	0	NA	Intergenic	ORR1B1|LTR|MaLR	-70503	NM_138755	192285	Mm.330408	NM_138755	ENSMUSG00000058318	Phf21a	80kDa|Bhc|Bhc80|D030065N23Rik|PFTF1	PHD finger protein 21A	protein-coding
unique_peak1-926-15-5-1.4272022498345-1.61682445937017	chr11	51807185	51807963	+	0	NA	intron (NM_009458, intron 3 of 5)	intron (NM_009458, intron 3 of 5)	6394	NM_009458	22210	Mm.384918	NM_009458	ENSMUSG00000020390	Ube2b	2610301N02Rik|E2-14k|HR6B|Rad6b|mHR6B	ubiquitin-conjugating enzyme E2B	protein-coding
common_peak2-26209-11-14--0.398197011356905-0.379391706698377	chr2	26315404	26315938	+	0	NA	exon (NM_008714, exon 34 of 34)	exon (NM_008714, exon 34 of 34)	9968	NR_105962	102465602		NR_105962		Mir6996	mmu-mir-6996	microRNA mir-6996	ncRNA
common_peak2-28957-25-24-0.217993715570381-0.403610417161433	chr5	100673707	100674550	+	0	NA	Intergenic	Intergenic	34417	NR_040679	69571	Mm.396412	NR_040679		2310034O05Rik	-	RIKEN cDNA 2310034O05 gene	ncRNA
unique_peak1-4665-17-14-0.311405742596519-0.466170754204149	chr3	92250020	92250719	+	0	NA	Intergenic	Intergenic	-7668	NM_009265	20754	Mm.140151	NM_009265	ENSMUSG00000048455	Sprr1b	-	small proline-rich protein 1B	protein-coding
common_peak2-26223-18-27--0.494435770829252-0.528262014464654	chr2	27009795	27010780	+	0	NA	intron (NR_040524, intron 5 of 6)	intron (NR_040524, intron 5 of 6)	7936	NR_040524	329371	Mm.247664	NR_040524	ENSMUSG00000085008	Dbhos	6430548G04|Gm13399|OTTMUSG00000011846	dopamine beta hydroxylase, opposite strand	ncRNA
common_peak1-19208-29-38--0.173112138247138-0.327809114039775	chr9	105052667	105053905	+	0	NA	Intergenic	L1Md_F3|LINE|L1	-5874	NM_028562	73532	Mm.23516	NM_028562	ENSMUSG00000032566	1700080E11Rik	AI429110|Tseg8	RIKEN cDNA 1700080E11 gene	protein-coding
unique_peak2-39879-7-19--1.52283726458917-1.55050753388976	chrX	74304996	74305492	+	0	NA	Intergenic	L1_Mm|LINE|L1	-451322	NM_020601	21372	Mm.258476	NM_020601	ENSMUSG00000025246	Tbl1x	5330429M20|Tbl1	transducin (beta)-like 1 X-linked	protein-coding
common_peak2-28327-23-16-0.634304663258741-0.82304638657543	chr4	133887982	133888616	+	0	NA	Intergenic	ORR1A3|LTR|MaLR	-10662	NM_001039677	230810	Mm.358876	NM_001039677	ENSMUSG00000028836	Slc30a2	6030430C21|ZnT-2|Znt2	solute carrier family 30 (zinc transporter), member 2	protein-coding
unique_peak1-6906-8-4-0.683294323060208-1.21878474469819	chr8	105225245	105225675	+	0	NA	intron (NM_009866, intron 2 of 12)	Lx5|LINE|L1	83551	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
common_peak2-26433-16-9-0.796335547380699-0.844317084070804	chr2	65227901	65228283	+	0	NA	Intergenic	Intergenic	-25635	NR_105755	102466151		NR_105755	miRBase:MI0021865	Mir6337	mmu-mir-6337	microRNA mir-6337	ncRNA
common_peak2-26418-78-110-0.0124052278104285-0.304942611491146	chr2	60209253	60210758	+	0	NA	intron (NM_013825, intron 2 of 34)	Lx3C|LINE|L1	11283	NM_013825	17076	Mm.2074	NM_013825	ENSMUSG00000026980	Ly75	CD205|DEC-205|DEC205	lymphocyte antigen 75	protein-coding
common_peak2-26915-18-20--0.0793982715504091-0.301029995663976	chr2	163073589	163074379	+	0	NA	intron (NM_001098799, intron 2 of 8)	intron (NM_001098799, intron 2 of 8)	22794	NM_001098799	269389	Mm.207709	NM_001098799	ENSMUSG00000074607	Tox2	AI851523|AV026525|BI987407|Gcx1|RxHMG1	TOX high mobility group box family member 2	protein-coding
common_peak2-20580-10-14--0.550475250599749-0.446472590016315	chr10	77581692	77582280	+	0	NA	Intergenic	Intergenic	49873	NM_015790	50723	Mm.17819	NM_015790	ENSMUSG00000000732	Icosl	AU044799|B7-H2|B7RP-1|B7h|BG071784|GI50|GL50|GL50-B|ICOS-L|Icoslg|LICOS|Ly115l|mKIAA0653	icos ligand	protein-coding
unique_peak2-39736-1-7--2.62705701021674-1.80617997398389	chr9	123137611	123138201	+	0	NA	Intergenic	Intergenic	-12750	NM_133974	109332	Mm.27519	NM_133974	ENSMUSG00000035498	Cdcp1	9030022E12Rik|AA409659|E030027H19Rik	CUB domain containing protein 1	protein-coding
unique_peak1-5969-12-2-2.06381348436648-2.79529063155376	chr6	94678442	94678961	+	0	NA	Intergenic	Intergenic	-28562	NM_008377	16206	Mm.245210	NM_008377	ENSMUSG00000030029	Lrig1	D6Bwg0781e|Img|LIG-1	leucine-rich repeats and immunoglobulin-like domains 1	protein-coding
common_peak1-13217-18-30--0.641277159158523-0.738267116931589	chr19	24279994	24280904	+	0	NA	intron (NM_011597, intron 1 of 22)	intron (NM_011597, intron 1 of 22)	19067	NM_011597	21873	Mm.104744	NM_011597	ENSMUSG00000024812	Tjp2	ZO-2	tight junction protein 2	protein-coding
common_peak1-10377-12-14--0.25811461052088-0.309074325783021	chr13	94057551	94058147	+	0	NA	Intergenic	L1_Mus2|LINE|L1	-16601	NM_147176	26556	Mm.37533	NM_011982		Homer1	PSD-Zip45|SYN47|Ves-1|homer-1|vesl-1	homer homolog 1 (Drosophila)	protein-coding
common_peak1-15027-44-86--0.621050661280193-1.58699959838832	chr3	121426519	121428220	+	0	NA	intron (NM_010171, intron 1 of 5)	intron (NM_010171, intron 1 of 5)	914	NM_010171	14066	Mm.273188	NM_010171	ENSMUSG00000028128	F3	AA409063|CD142|Cf-3|Cf3|TF	coagulation factor III	protein-coding
common_peak2-31951-11-12--0.191746133889479-0.310474156842889	chr9	65201757	65202334	+	0	NA	intron (NM_016688, intron 1 of 4)	RLTR12B|LTR|ERVK	-6822	NM_001111145	208080	Mm.291862	NM_001111145	ENSMUSG00000086228	Ubap1l	Gm514	ubiquitin-associated protein 1-like	protein-coding
common_peak2-31636-11-7-0.508693584251613-1.21681515183528	chr8	123716704	123717054	+	0	NA	Intergenic	B3|SINE|B2	65294	NM_008024	14241	Mm.5111	NM_008024	ENSMUSG00000097084	Foxl1	FREAC7|Fkh6|fkh-6	forkhead box L1	protein-coding
unique_peak2-36540-11-33--1.57876925699873-2.80071159219767	chr2	164804912	164805945	+	0	NA	intron (NM_020333, intron 7 of 25)	intron (NM_020333, intron 7 of 25)	11940	NM_020333	57138	Mm.252987	NM_020333	ENSMUSG00000017740	Slc12a5	KCC2|mKIAA1176	solute carrier family 12, member 5	protein-coding
unique_peak2-36525-5-8--0.874305337448166-1.10484139239135	chr2	163493867	163494208	+	0	NA	intron (NM_001039390, intron 2 of 4)	intron (NM_001039390, intron 2 of 4)	9843	NM_001164053	18769	Mm.10091	NM_011106	ENSMUSG00000035268	Pkig	PKIgamma	protein kinase inhibitor, gamma	protein-coding
unique_peak2-35804-3-6--1.22133801201688-1.08602067057793	chr18	60896028	60896380	+	0	NA	Intergenic	Intergenic	-23161	NM_008306	15531	Mm.181862	NM_008306	ENSMUSG00000054008	Ndst1	1200015G06Rik|Hsst|NDST-1|b2b2230Clo	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1	protein-coding
common_peak1-16556-10-8-0.186490343566457-1.078512453669	chr5	145115839	145116336	+	0	NA	intron (NM_025833, intron 1 of 13)	intron (NM_025833, intron 1 of 13)	-2705	NR_102374	100579137		NR_102372		Dmr	-	Dmrt1 related	ncRNA
unique_peak2-36132-7-7--0.200909169701811-0.97990265578305	chr2	13558832	13559260	+	0	NA	Intergenic	ID_B1|SINE|B4	63108	NM_011701	22352	Mm.268000	NM_011701	ENSMUSG00000026728	Vim	-	vimentin	protein-coding
unique_peak2-35178-1-7--2.62705701021674-1.80617997398389	chr16	45886450	45886814	+	0	NA	Intergenic	MIR3|SINE|MIR	-42141	NM_001252442	208177	Mm.211477	NM_153412	ENSMUSG00000033149	Phldb2	AV253284|C820004H04Rik|LL5b|LL5beta	pleckstrin homology-like domain, family B, member 2	protein-coding
unique_peak1-4287-37-6-2.71863814942821-7.87818366083572	chr2	143846561	143847920	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-10241	NM_024281	81910	Mm.13705	NM_024281	ENSMUSG00000027422	Rrbp1	1700087N07Rik|5730465C04Rik|ES/130|mKIAA1398|mRRp0|mRRp1.8|mRRp10|mRRp15a|mRRp15b|mRRp16.8|mRRp2|mRRp41|mRRp47|mRRp5.4|p180	ribosome binding protein 1	protein-coding
unique_peak1-3180-8-1-2.00522241794757-2.05605744720049	chr18	43979176	43979686	+	0	NA	Intergenic	RMER12|LTR|ERVK	-26899	NM_001033280	225443	Mm.100304	NM_001033280	ENSMUSG00000071858	Gm94	-	predicted gene 94	protein-coding
unique_peak1-2879-9-0-3.18961340640422-3.01029995663981	chr17	36407453	36407859	+	0	NA	intron (NM_024468, intron 1 of 6)	intron (NM_024468, intron 1 of 6)	722	NM_178281	79263	Mm.40624	NM_024468	ENSMUSG00000045409	Trim39	1100001D15Rik|E130103K13Rik|RBCC-B30.2|Rnf23|mKIAA4179|tfp	tripartite motif-containing 39	protein-coding
unique_peak1-525-10-2-1.77145284428761-2.09384600808989	chr1	184442975	184443460	+	0	NA	intron (NM_009794, intron 1 of 20)	intron (NM_009794, intron 1 of 20)	4397	NM_009794	12334	Mm.19306	NM_009794	ENSMUSG00000026509	Capn2	AI326419|Capa-2|Capa2|m-calpain|m-calpin	calpain 2	protein-coding
unique_peak1-5174-8-0-3.00522241794757-2.70926996097583	chr5	30139612	30140138	+	0	NA	intron (NR_105781, intron 1 of 2)	L1_Mus1|LINE|L1	24324	NR_105781	102465962		NR_105781	miRBase:MI0021891	Mir6362	mmu-mir-6362	microRNA mir-6362	ncRNA
unique_peak1-5736-11-3-1.50869358425161-1.95434855131066	chr6	43668113	43668550	+	0	NA	Intergenic	L1VL4|LINE|L1	-52157	NM_013861	29807	Mm.320979	NM_013861	ENSMUSG00000029735	Tpk1	-	thiamine pyrophosphokinase	protein-coding
unique_peak1-1105-25-9-1.53992181045774-2.70611768348013	chr11	90225174	90226390	+	0	NA	intron (NM_172563, intron 2 of 3)	intron (NM_172563, intron 2 of 3)	26449	NM_172563	217082	Mm.158903	NM_172563	ENSMUSG00000003949	Hlf	E230015K02Rik	hepatic leukemia factor	protein-coding
unique_peak2-36754-4-6--0.830815435910851-0.989110657569874	chr3	61343760	61344113	+	0	NA	Intergenic	Intergenic	175507	NM_028712	74012	Mm.422674	NM_028712	ENSMUSG00000036894	Rap2b	4021402C18Rik|AA408554	RAP2B, member of RAS oncogene family	protein-coding
common_peak1-17763-88-170--0.402440105715366-1.52570265309957	chr7	90128767	90130986	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-9975	NR_045855	71285	Mm.76818	NR_045855		4933430H16Rik	-	RIKEN cDNA 4933430H16 gene	ncRNA
common_peak2-29374-153-265--0.0802641293804411-0.372019844577236	chr6	113376931	113378987	+	0	NA	intron (NM_001301295, intron 5 of 5)	intron (NM_001301295, intron 5 of 5)	7790	NM_178373	14311	Mm.10026	NM_178373	ENSMUSG00000030278	Cidec	CIDE-3|Fsp27	cell death-inducing DFFA-like effector c	protein-coding
unique_peak2-36499-10-8-0.186490343566457-1.078512453669	chr2	155979456	155979875	+	0	NA	intron (NM_133242, intron 13 of 16)	intron (NM_133242, intron 13 of 16)	9696	NM_025946	67067	Mm.371623	NM_025946	ENSMUSG00000067847	Romo1	2010100O12Rik|AI853864	reactive oxygen species modulator 1	protein-coding
unique_peak1-4017-11-6-0.701338662194009-1.32595962126035	chr2	38539794	38540450	+	0	NA	Intergenic	Intergenic	29940	NM_139051	26423	Mm.31387	NM_139051	ENSMUSG00000026751	Nr5a1	Ad4BP|ELP|ELP-3|Ftz-F1|Ftzf1|SF-1|SF1	nuclear receptor subfamily 5, group A, member 1	protein-coding
unique_peak1-6094-10-3-1.35641534500877-1.75805390616669	chr6	124937808	124938315	+	0	NA	Intergenic	Intergenic	-8677	NM_175696	319352	Mm.295327	NM_175696	ENSMUSG00000030329	Pianp	AI255183|AU067746|C530028O21Rik|Panp	PILR alpha associated neural protein	protein-coding
unique_peak2-38746-5-11--1.28934283672701-1.477227296591	chr7	114199960	114200444	+	0	NA	Intergenic	MERVL-int|LTR|ERVL	-17142	NM_147033	259035	Mm.377800	NM_147033	ENSMUSG00000049674	Olfr714	MOR263-2|P4	olfactory receptor 714	protein-coding
unique_peak1-515-16-4-1.7963355473807-2.18192634393779	chr1	183865253	183865972	+	0	NA	intron (NM_008680, intron 3 of 14)	intron (NM_008680, intron 3 of 14)	84499	NM_008680	13800	Mm.87759	NM_008680	ENSMUSG00000022995	Enah	Mena|NDPP-1|Ndpp1|WBP8	enabled homolog (Drosophila)	protein-coding
common_peak1-18206-26-28-0.0699180970308904-0.316008636696532	chr8	23149556	23150395	+	0	NA	intron (NM_007511, intron 1 of 20)	intron (NM_007511, intron 1 of 20)	20571	NM_007511	11979	Mm.87854	NM_007511	ENSMUSG00000006567	Atp7b	Atp7a|WND|tx	ATPase, Cu++ transporting, beta polypeptide	protein-coding
unique_peak2-39549-5-13--1.51173525806346-1.78669045979184	chr9	69466457	69467059	+	0	NA	Intergenic	Intergenic	141989	NM_022378	64290	Mm.440890	NM_022378	ENSMUSG00000059246	Foxb1	C43|Fkh5|Foxb1a|Foxb1b|Hfh-e5.1|Mf3|Twh	forkhead box B1	protein-coding
common_peak1-10246-20-20-0.0957573618124323-0.321718508207528	chr13	54608592	54609615	+	0	NA	intron (NM_176987, intron 1 of 9)	L1MEf|LINE|L1	3937	NM_176987	319719	Mm.376151	NM_176987	ENSMUSG00000043183	Simc1	4732471D19Rik	SUMO-interacting motifs containing 1	protein-coding
common_peak1-8843-27-39--0.330382143992127-0.451135909022758	chr11	29525906	29526973	+	0	NA	Intergenic	MLT2B2|LTR|ERVL	-66459	NM_194053	68585	Mm.192580	NM_024226	ENSMUSG00000020458	Rtn4	1110020G17Rik|AA407876|AA409940|AA960376|ASY|C130026I10Rik|NOGO|NSP-CL|NgA|Nogo-A|Nogo-B|Nogo-C|mKIAA0886|mKIAA4153	reticulon 4	protein-coding
common_peak2-24228-13-10-0.319040412000471-0.446472590016315	chr16	87348913	87349407	+	0	NA	Intergenic	Intergenic	-5270	NM_001159331	67768	Mm.296532	NM_026366	ENSMUSG00000044442	N6amt1	5830445C04Rik|Hemk2|Pred28	N-6 adenine-specific DNA methyltransferase 1 (putative)	protein-coding
unique_peak2-38558-9-10--0.269818212233077-1.05503135781948	chr7	64275120	64275722	+	0	NA	intron (NM_008074, intron 3 of 9)	L1Md_A|LINE|L1	366820	NM_008074	14407	Mm.434343	NM_008074		Gabrg3	B230362M20Rik|Gabrg-3	gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3	protein-coding
common_peak2-23516-24-13-0.985854980710112-1.52081014994907	chr15	76780856	76781547	+	0	NA	TTS (NM_054099)	TTS (NM_054099)	2227	NM_054099	117171	Mm.322968	NM_054099		1110038F14Rik	-	RIKEN cDNA 1110038F14 gene	protein-coding
common_peak2-27993-32-45--0.244469936837353-0.394172396164276	chr4	44756564	44757346	+	0	NA	Intergenic	Intergenic	-12476	NM_138590	319885	Mm.331576	NM_138590	ENSMUSG00000035649	Zcchc7	4930572I07Rik|D4Wsu132e	zinc finger, CCHC domain containing 7	protein-coding
common_peak2-21792-14-13-0.0918612383000403-0.332077462497413	chr11	117986765	117987511	+	0	NA	intron (NM_001167746, intron 4 of 80)	intron (NM_001167746, intron 4 of 80)	3395	NM_001167746	69926	Mm.473893	NM_001167746	ENSMUSG00000033987	Dnah17	2810003K23Rik|Dnahc17|Dnahcl1|Gm1178|mKIAA3028	dynein, axonemal, heavy chain 17	protein-coding
common_peak1-16494-17-6-1.41094141614743-1.84350559086818	chr5	138754341	138755137	+	0	NA	Intergenic	RLTR13D1|LTR|ERVK	33002	NM_016964	50878	Mm.285609	NM_016964	ENSMUSG00000036928	Stag3	SA-2	stromal antigen 3	protein-coding
common_peak2-23960-7-7--0.200909169701811-0.97990265578305	chr16	16213877	16214244	+	0	NA	intron (NM_026163, intron 1 of 12)	intron (NM_026163, intron 1 of 12)	622	NM_026163	67451	Mm.2252	NM_026163	ENSMUSG00000041957	Pkp2	1200008D14Rik|1200012P04Rik|AA516617|Pkp2l	plakophilin 2	protein-coding
common_peak1-17606-13-14--0.12841856497075-0.301029995663977	chr7	45017862	45018597	+	0	NA	Intergenic	Intergenic	1501675	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak1-3735-9-1-2.18961340640422-2.31132995230379	chr19	46937367	46937824	+	0	NA	intron (NM_001102471, intron 4 of 6)	intron (NM_001102471, intron 4 of 6)	99246	NM_029810	76952	Mm.40965	NM_029810	ENSMUSG00000025041	Nt5c2	2010002I23Rik|CnII|ENSMUSG00000025039|Gm9751|Gmp|Nt5b|Pnt5|cN-II	5'-nucleotidase, cytosolic II	protein-coding
common_peak2-24129-7-4-0.477162735410827-1.09384600808989	chr16	34860422	34860812	+	0	NA	intron (NM_139300, intron 2 of 31)	intron (NM_139300, intron 2 of 31)	75581	NM_139300	107589	Mm.33360	NM_139300	ENSMUSG00000022836	Mylk	9530072E15Rik|A930019C19Rik|AW489456|KRP|MLCK108|MLCK210|Mlck|smMLCK	myosin, light polypeptide kinase	protein-coding
common_peak2-29248-38-46-0.0168638076208927-0.31027100108714	chr5	139791367	139792278	+	0	NA	intron (NM_172723, intron 1 of 10)	(TCTG)n|Simple_repeat|Simple_repeat	9596	NM_172723	231821	Mm.297819	NM_172723	ENSMUSG00000056413	Adap1	4930431P11Rik|Centa1|GC1L|p42IP4	ArfGAP with dual PH domains 1	protein-coding
common_peak1-13076-37-13-1.71863814942821-4.54965489029365	chr19	6546056	6547360	+	0	NA	Intergenic	ID_B1|SINE|B4	-3638	NM_009203	20521	Mm.391146	NM_009203	ENSMUSG00000061742	Slc22a12	AI987855|OAT4L|Rst|Slc22al2|URAT1	solute carrier family 22 (organic anion/cation transporter), member 12	protein-coding
common_peak1-8253-61-83--0.00956809302942041-0.301029995663994	chr10	19907152	19908239	+	0	NA	intron (NM_008635, intron 1 of 17)	intron (NM_008635, intron 1 of 17)	13965	NR_045350	73811	Mm.55644	NR_045350		4930405J17Rik	-	RIKEN cDNA 4930405J17 gene	ncRNA
common_peak1-9217-9-7-0.18961340640422-1.05908390183068	chr11	83606432	83606966	+	0	NA	Intergenic	Intergenic	39560	NM_145432	217026	Mm.117874	NM_145432	ENSMUSG00000000976	Heatr6	2700008B19Rik|BB135312|BB249351	HEAT repeat containing 6	protein-coding
common_peak2-32341-12-7-0.648775985087639-0.697979855752659	chrX	75137869	75138165	+	0	NA	Intergenic	L1_Mus2|LINE|L1	27920	NM_001085544	628923	Mm.79600	NM_001085544	ENSMUSG00000079522	Gm14744	OTTMUSG00000017866|Obp1f	predicted gene 14744	protein-coding
unique_peak1-6097-17-4-1.89636824331768-2.60953805094651	chr6	125410995	125411801	+	0	NA	intron (NM_007657, intron 6 of 7)	intron (NM_007657, intron 6 of 7)	33375	NM_007657	12527	Mm.210676	NM_007657	ENSMUSG00000030342	Cd9	Tspan29	CD9 antigen	protein-coding
common_peak2-24027-26-49--0.715957097616262-1.30310500416066	chr16	23127358	23128304	+	0	NA	promoter-TSS (NM_145480)	promoter-TSS (NM_145480)	-28	NM_145480	106344	Mm.386835	NM_145480	ENSMUSG00000022881	Rfc4	A1|AI894123|AU040575|RFC37	replication factor C (activator 1) 4	protein-coding
unique_peak1-3985-7-1-1.79909083029819-1.80617997398389	chr2	34598356	34598694	+	0	NA	intron (NM_025709, intron 2 of 26)	B1_Mus2|SINE|Alu	12227	NM_025709	66691	Mm.156452	NM_025709	ENSMUSG00000026867	Gapvd1	2010005B09Rik|4432404J10Rik|AW108497|Gapex-5|RAP6|RME-6|mKIAA1521	GTPase activating protein and VPS9 domains 1	protein-coding
unique_peak1-6229-8-2-1.42025991722641-1.65811743852845	chr7	4776852	4777299	+	0	NA	TTS (NM_172737)	TTS (NM_172737)	-13133	NM_133777	77891	Mm.389787	NM_133777	ENSMUSG00000060860	Ube2s	0910001J09Rik|6720465F12Rik|AA409170|E2-EPF	ubiquitin-conjugating enzyme E2S	protein-coding
unique_peak1-4957-11-0-3.50869358425161-3.61235994796777	chr4	98334522	98335045	+	0	NA	intron (NM_001005787, intron 9 of 15)	intron (NM_001005787, intron 9 of 15)	-58662	NM_001081202	381591	Mm.34340	NM_001081202	ENSMUSG00000087166	L1td1	AA546746|AB211064|D76865|ECAT11	LINE-1 type transposase domain containing 1	protein-coding
common_peak2-28809-13-5-1.19350952991661-1.95509489018123	chr5	64867489	64867807	+	0	NA	promoter-TSS (NR_045413)	promoter-TSS (NR_045413)	-599	NR_045411	77382	Mm.366742	NR_045411		C030018K13Rik	-	RIKEN cDNA C030018K13 gene	ncRNA
common_peak2-28966-5-13--1.51173525806346-1.78669045979184	chr5	103754594	103755129	+	0	NA	Intergenic	AT_rich|Low_complexity|Low_complexity	-26813	NR_040699	74624	Mm.389662	NR_040699		4930429D17Rik	-	RIKEN cDNA 4930429D17 gene	ncRNA
unique_peak2-37449-4-7--1.02346051385325-1.09384600808989	chr4	155851525	155851922	+	0	NA	Intergenic	Intergenic	-242757	NM_198305	231003	Mm.423038	NM_198305	ENSMUSG00000078484	Klhl17	AL022703|BC058738	kelch-like 17	protein-coding
common_peak1-10302-13-16--0.30899081061257-0.330004445983672	chr13	64312047	64312649	+	0	NA	intron (NM_001122989, intron 9 of 13)	B3|SINE|B2	37498	NM_001122989	218294	Mm.25335	NM_172587	ENSMUSG00000033102	Cdc14b	2810432N10Rik|A530086E13Rik|AA472821|CDC14B3|Cdc14B1	CDC14 cell division cycle 14B	protein-coding
common_peak1-13056-26-28-0.0699180970308904-0.316008636696532	chr19	6014685	6015636	+	0	NA	promoter-TSS (NM_007600)	promoter-TSS (NM_007600)	87	NM_007600	12333	Mm.6221	NM_007600	ENSMUSG00000024942	Capn1	Capa-1|Capa1|mu-calpin	calpain 1	protein-coding
unique_peak1-6747-10-7-0.356415345008769-1.12966497611638	chr8	47933610	47934136	+	0	NA	Intergenic	Intergenic	108774	NM_008391	16363	Mm.1149	NM_008391	ENSMUSG00000031627	Irf2	9830146E22Rik|AI646973|Irf-2	interferon regulatory factor 2	protein-coding
common_peak2-24234-13-5-1.19350952991661-1.95509489018123	chr16	88539600	88539961	+	0	NA	Intergenic	L1_Mus3|LINE|L1	23648	NM_018778	54420	Mm.25836	NM_018778	ENSMUSG00000050520	Cldn8	AI648025	claudin 8	protein-coding
common_peak1-17032-10-4-1.03448725012141-1.5150158574804	chr6	91727228	91727787	+	0	NA	intron (NM_001159507, intron 16 of 23)	intron (NM_001159507, intron 16 of 23)	29880	NM_001159507	243547	Mm.333264	NM_001033353	ENSMUSG00000030098	Grip2	-	glutamate receptor interacting protein 2	protein-coding
common_peak1-12047-17-20--0.174021084573723-0.306598483909156	chr17	21650098	21650979	+	0	NA	Intergenic	Lx9|LINE|L1	-21965	NM_144515	22710	Mm.296100	NM_144515		Zfp52	KRAB11|Zfp-52|Zfp76|mszf23-2|mszf24|mszf34|mszf75|zfec29	zinc finger protein 52	protein-coding
common_peak2-31098-14-9-0.577288065470282-0.630231561310125	chr8	26794506	26794980	+	0	NA	intron (NM_001081269, intron 13 of 22)	ORR1D1|LTR|MaLR	-35777	NR_121642	71910	Mm.385055	NM_028000	ENSMUSG00000031570	Ppapdc1b	1810019D05Rik|2310022A04Rik|AW045471|Ppapdc1	phosphatidic acid phosphatase type 2 domain containing 1B	protein-coding
unique_peak2-33500-11-17--0.661231417190699-0.58239619684445	chr11	72793009	72793663	+	0	NA	intron (NM_001163336, intron 12 of 20)	intron (NM_001163336, intron 12 of 20)	18665	NM_001163337	53313	Mm.6306	NM_016745	ENSMUSG00000020788	Atp2a3	SERCA3b|Serca3	ATPase, Ca++ transporting, ubiquitous	protein-coding
common_peak2-23010-21-22-0.0459273092092225-0.319918318021793	chr14	62331925	62332671	+	0	NA	Intergenic	Intergenic	-31088	NR_028264	668253	Mm.32886	NR_028264	ENSMUSG00000097589	Dleu2	1810047A16Rik|4932411A06Rik|7730401J12Rik|AI197277|AI788824|Alt1|Gm9069|Leu2	deleted in lymphocytic leukemia, 2	ncRNA
common_peak1-12074-17-22--0.305265617851975-0.348739088570342	chr17	24352099	24352713	+	0	NA	3' UTR (NM_028056, exon 10 of 10)	3' UTR (NM_028056, exon 10 of 10)	5308	NM_028056	72016	Mm.23881	NM_028056	ENSMUSG00000024118	1600002H07Rik	-	RIKEN cDNA 1600002H07 gene	protein-coding
common_peak2-23858-13-34--1.3508109863072-2.16696607243888	chr15	102256934	102257970	+	0	NA	intron (NM_013672, intron 4 of 5)	B1_Mur3|SINE|Alu	-18346	NM_144547	110542	Mm.60331	NM_144547	ENSMUSG00000023047	Amhr2	Misiir|Misrii|Mrii	anti-Mullerian hormone type 2 receptor	protein-coding
common_peak2-23552-9-13--0.617741515653384-0.459837087125828	chr15	79074972	79075601	+	0	NA	exon (NM_008837, exon 7 of 13)	exon (NM_008837, exon 7 of 13)	9892	NM_020516	57274	Mm.441697	NM_020516	ENSMUSG00000032988	Slc16a8	Mct3	solute carrier family 16 (monocarboxylic acid transporters), member 8	protein-coding
common_peak2-23110-20-30--0.466121525795682-0.569352520859861	chr14	79426388	79427354	+	0	NA	intron (NM_027906, intron 20 of 44)	intron (NM_027906, intron 20 of 44)	177886	NM_173758	219189	Mm.159651	NM_027906	ENSMUSG00000058997	Vwa8	1300010F03Rik|4932416F07Rik|AI957255|Kiaa0564|mKIAA0564	von Willebrand factor A domain containing 8	protein-coding
common_peak2-22282-15-20--0.380152672223105-0.397739447719386	chr13	12257535	12258235	+	0	NA	Intergenic	L1MA4|LINE|L1	20870	NR_045170	328186	Mm.188154	NM_183202		Gm10336	B330003H21|ENSMUSG00000071543	predicted gene 10336	ncRNA
common_peak1-18253-29-21-0.652858461977813-1.06916698217164	chr8	33901960	33903091	+	0	NA	Intergenic	Intergenic	157973	NM_001177589	100042715	Mm.291093	NM_001177589		Gm3985	-	predicted gene 3985	protein-coding
unique_peak1-4106-14-3-1.89921616035764-2.80787975886178	chr2	75960739	75961479	+	0	NA	intron (NM_001081033, intron 9 of 19)	intron (NM_001081033, intron 9 of 19)	-141085	NM_030188	78802	Mm.282339	NM_030188	ENSMUSG00000075271	Ttc30a1	4930506L13Rik	tetratricopeptide repeat domain 30A1	protein-coding
unique_peak2-39019-14-25--0.801223557783447-0.84969927174089	chr8	57498471	57499435	+	0	NA	Intergenic	Intergenic	886808	NM_175939	244486	Mm.67684	NM_175939	ENSMUSG00000046258	Adam29	-	a disintegrin and metallopeptidase domain 29	protein-coding
unique_peak2-37684-6-8--0.60452689106201-1.03789460276074	chr5	98941855	98942279	+	0	NA	intron (NM_001024614, intron 3 of 5)	RLTR11A2|LTR|ERVK	-37384	NR_030484	735265		NR_030484		Mir703	Mirn703|mmu-mir-703	microRNA 703	ncRNA
unique_peak1-2651-7-2-1.21412832957703-1.45399745587252	chr16	49814412	49814858	+	0	NA	Intergenic	Intergenic	-41132	NM_010581	16423	Mm.31752	NM_010581	ENSMUSG00000055447	Cd47	9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp	CD47 antigen (Rh-related antigen, integrin-associated signal transducer)	protein-coding
common_peak1-15647-23-18-0.473839991065495-0.618644178587689	chr4	135292280	135293127	+	0	NA	intron (NM_178257, intron 3 of 6)	B3|SINE|B2	8629	NM_178257	230828	Mm.261647	NM_178257		Il22ra1	9130219A07Rik|ENSMUSG00000073746|IL-22R|Il22r	interleukin 22 receptor, alpha 1	protein-coding
unique_peak1-6647-19-1-3.40268732666169-5.15699611159533	chr8	11369305	11370268	+	0	NA	intron (NM_009932, intron 4 of 47)	intron (NM_009932, intron 4 of 47)	56957	NM_009932	12827	Mm.181021	NM_009932	ENSMUSG00000031503	Col4a2	Col4a-2	collagen, type IV, alpha 2	protein-coding
unique_peak1-4410-8-1-2.00522241794757-2.05605744720049	chr2	167578419	167578937	+	0	NA	Intergenic	Intergenic	62001	NR_015500	329562	Mm.123101	NM_177851	ENSMUSG00000006462	A530013C23Rik	-	RIKEN cDNA A530013C23 gene	ncRNA
unique_peak1-2702-23-0-4.72176750450908-NA	chr16	87784241	87785123	+	0	NA	Intergenic	Intergenic	85483	NM_007520	12013	Mm.26147	NM_007520	ENSMUSG00000025612	Bach1	6230421P05Rik|AI323795	BTB and CNC homology 1	protein-coding
common_peak1-14927-27-26-0.236658448731768-0.436052471002789	chr3	101116602	101117745	+	0	NA	Intergenic	Intergenic	-25311	NM_013486	12481	Mm.22842	NM_013486	ENSMUSG00000027863	Cd2	LFA-2|Ly-37|Ly37	CD2 antigen	protein-coding
common_peak2-28628-12-5-1.06381348436648-1.78669045979184	chr5	25614653	25615086	+	0	NA	Intergenic	Intergenic	349025	NM_001004365	242894	Mm.150319	NM_001004365	ENSMUSG00000056367	Actr3b	9630005C02|ARP11|AW047569|Arp3b|Arp3beta	ARP3 actin-related protein 3B	protein-coding
unique_peak1-774-6-1-1.5653981103803-1.56314192529759	chr10	128959574	128960091	+	0	NA	Intergenic	Intergenic	-3453	NM_146930	258932	Mm.377754	NM_146930	ENSMUSG00000047626	Olfr791	MOR114-1	olfactory receptor 791	protein-coding
common_peak1-12894-10-10--0.103016273628528-0.301029995663987	chr18	82470297	82470848	+	0	NA	Intergenic	Intergenic	105597	NM_008082	14427	Mm.6219	NM_008082	ENSMUSG00000024553	Galr1	Galnr1	galanin receptor 1	protein-coding
common_peak2-23044-11-8-0.338768582809301-1.14218153353838	chr14	69813255	69813753	+	0	NA	TTS (NM_010921)	TTS (NM_010921)	4755	NM_010921	18095	Mm.3520	NM_010921	ENSMUSG00000022061	Nkx3-1	Bax|NKX3.1|NKX3A|Nkx-3.1|bagpipe	NK-3 transcription factor, locus 1 (Drosophila)	protein-coding
common_peak2-27340-17-12-0.517856620063946-0.647240723060192	chr3	70803672	70804340	+	0	NA	Intergenic	Intergenic	-192793	NR_040556	625901	Mm.366028	NR_040556	ENSMUSG00000097252	Gm6634	EG625901	predicted gene 6634	ncRNA
common_peak1-7844-8-12--0.695217300193522-0.475924844171029	chr1	131526938	131527456	+	0	NA	intron (NM_172485, intron 5 of 27)	intron (NM_172485, intron 5 of 27)	357316	NM_172485	210417	Mm.380518	NM_172485	ENSMUSG00000042581	Thsd7b	1700074E13Rik|B930082A18|D130067I03Rik	thrombospondin, type I, domain containing 7B	protein-coding
common_peak2-24683-13-21--0.680959587999529-0.607095980551316	chr17	43053241	43054255	+	0	NA	Intergenic	Intergenic	-40375	NM_009847	12488	Mm.218637	NM_009847	ENSMUSG00000061665	Cd2ap	AL024079|C78928|METS-1|Mets1	CD2-associated protein	protein-coding
unique_peak1-6864-7-4-0.477162735410827-1.09384600808989	chr8	87363999	87364444	+	0	NA	intron (NM_009010, intron 1 of 8)	CpG	343	NM_001297607	19358	Mm.255539	NM_009010	ENSMUSG00000003813	Rad23a	2310040P19Rik|AL024030|HR23A|mHR23A	RAD23a homolog (S. cerevisiae)	protein-coding
common_peak1-8895-21-30--0.384707045120639-0.446094173747089	chr11	49049893	49050830	+	0	NA	Intergenic	Intergenic	-7332	NM_010794	17308	Mm.196933	NM_010794	ENSMUSG00000020346	Mgat1	Mgat-1	mannoside acetylglucosaminyltransferase 1	protein-coding
unique_peak1-3668-10-1-2.35641534500877-2.57096726280955	chr19	41247998	41248672	+	0	NA	intron (NM_011904, intron 2 of 20)	intron (NM_011904, intron 2 of 20)	32929	NM_011904	24087	Mm.89983	NM_011904	ENSMUSG00000025013	Tll2	-	tolloid-like 2	protein-coding
common_peak1-12095-38-57--0.286528335829042-0.468749305398727	chr17	25183505	25184608	+	0	NA	intron (NM_134126, intron 14 of 29)	B2_Mm1a|SINE|B2	31025	NM_134126	106633	Mm.32802	NM_134126	ENSMUSG00000024169	Ift140	AI661311|Tce5|Wdtc2|mKIAA0590	intraflagellar transport 140	protein-coding
common_peak2-22728-49-57-0.148302827897612-0.389014771016012	chr13	108043902	108045056	+	0	NA	Intergenic	Intergenic	-215423	NR_045083	105120	Mm.417700	NR_045083		AI197445	-	expressed sequence AI197445	ncRNA
unique_peak2-39807-0-5--3.42509343119537-1.32905871926422	chrX	32225568	32225852	+	0	NA	Intergenic	Intergenic	-94010	NM_001270667	100861966	Mm.443264	NM_001270667	ENSMUSG00000095801	Gm21950	Mgclh	predicted gene, 21950	protein-coding
common_peak2-21862-38-58--0.311190390063311-0.50619083865892	chr12	40222116	40223262	+	0	NA	Intergenic	Intergenic	541274	NM_007487	11861	Mm.12723	NM_007487	ENSMUSG00000047446	Arl4a	AI467555|Arl4	ADP-ribosylation factor-like 4A	protein-coding
common_peak2-25074-8-9--0.316705676939792-1.03275496310833	chr18	35383080	35383427	+	0	NA	intron (NM_009818, intron 9 of 17)	intron (NM_009818, intron 9 of 17)	-8575	NM_178005	107065	Mm.39900	NM_178005	ENSMUSG00000071862	Lrrtm2	AI851755|BB129880|C630011A14Rik|mKIAA0416	leucine rich repeat transmembrane neuronal 2	protein-coding
unique_peak1-164-9-0-3.18961340640422-3.01029995663981	chr1	74016462	74017075	+	0	NA	intron (NM_001289895, intron 18 of 32)	intron (NM_001289895, intron 18 of 32)	-105728	NR_045311	109198	Mm.359721	NR_045311		6030407O03Rik	-	RIKEN cDNA 6030407O03 gene	ncRNA
unique_peak2-38875-5-6--0.511735258063458-0.947717972411649	chr8	13647614	13648025	+	0	NA	intron (NM_009025, intron 1 of 23)	intron (NM_009025, intron 1 of 23)	29768	NM_009025	19414	Mm.18517	NM_009025	ENSMUSG00000031453	Rasa3	AI326412|C86362|E130011G04|GAPIII|scat	RAS p21 protein activator 3	protein-coding
common_peak1-13698-7-14--1.10779976531033-0.817533494790411	chr2	30392620	30393181	+	0	NA	Intergenic	ID_B1|SINE|B4	-57664	NM_030137	78617	Mm.40413	NM_030137	ENSMUSG00000047363	Cstad	9530039B02Rik	CSA-conditional, T cell activation-dependent protein	protein-coding
common_peak2-20994-10-17--0.813509656433543-0.699649909729472	chr11	23007894	23008744	+	0	NA	Intergenic	RMER16-int|LTR|ERVK	94932	NM_028672	73873	Mm.252406	NM_028672	ENSMUSG00000049811	Fam161a	4930430E16Rik	family with sequence similarity 161, member A	protein-coding
unique_peak2-36242-5-11--1.28934283672701-1.477227296591	chr2	39008151	39008738	+	0	NA	intron (NM_178778, intron 2 of 17)	intron (NM_178778, intron 2 of 17)	9311	NR_033526	100042584	Mm.451696	NR_033526		Gm16523	A130054J05Rik	mitochondrial ribosomal protein L40 pseudogene	pseudo
unique_peak1-860-7-6--0.00826409175941478-0.97990265578305	chr11	20886893	20887416	+	0	NA	Intergenic	Intergenic	-104173	NM_023324	67245	Mm.28957	NM_023324	ENSMUSG00000020134	Peli1	2810468L03Rik|A930031K15Rik|AA409794|AI586297|D11Ertd676e	pellino 1	protein-coding
common_peak2-22910-16-9-0.796335547380699-0.844317084070804	chr14	37185130	37185637	+	0	NA	Intergenic	Intergenic	277232	NM_175008	218921	Mm.212464	NM_175008	ENSMUSG00000096405	4930474N05Rik	-	RIKEN cDNA 4930474N05 gene	protein-coding
common_peak2-22033-41-12-2.00070898670757-6.15378020477106	chr12	69159324	69159600	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-389204	NR_033146	100316870	Mm.379794	NR_033146		Gm17821	-	DDB1 and CUL4 associated factor 5 pseudogene	pseudo
unique_peak2-32463-5-5--0.289342836727009-0.909929411522249	chr1	16229522	16229894	+	0	NA	intron (NM_001111272, intron 11 of 12)	ORR1D1|LTR|MaLR	133745	NM_133832	98711	Mm.274376	NM_133832		Rdh10	3110069K09Rik|4921506A21Rik|AI875664|AW549993|D1Ertd762e|m366Asp	retinol dehydrogenase 10 (all-trans)	protein-coding
common_peak1-7649-20-23--0.0968877161299631-0.305855887145851	chr1	72711134	72711879	+	0	NA	intron (NM_176980, intron 13 of 23)	intron (NM_176980, intron 13 of 23)	35632	NM_176980	319695	Mm.249056	NM_176980	ENSMUSG00000039342	Ankar	4932422E22Rik	ankyrin and armadillo repeat containing	protein-coding
unique_peak2-32697-6-11--1.01956439034085-1.32595962126035	chr1	150393386	150393865	+	0	NA	Intergenic	L1Md_T|LINE|L1	1414789	NM_008869	18783	Mm.4186	NM_008869	ENSMUSG00000056220	Pla2g4a	Pla2g4|cPLA2|cPLA2alpha	phospholipase A2, group IVA (cytosolic, calcium-dependent)	protein-coding
common_peak1-17566-36-51--0.221118631973337-0.382513308492835	chr7	34967628	34969084	+	0	NA	Intergenic	Intergenic	13310	NM_026549	68079	Mm.38173	NM_026549	ENSMUSG00000002635	Pdcd2l	6030457N17Rik	programmed cell death 2-like	protein-coding
common_peak2-22414-39-46-0.061172395241516-0.321605260051241	chr13	35741325	35742362	+	0	NA	Intergenic	Intergenic	-9888	NM_009881	12593	Mm.29002	NM_009881	ENSMUSG00000059288	Cdyl	AI325931	chromodomain protein, Y chromosome-like	protein-coding
common_peak2-22242-64-71-0.295521400266291-0.696474447554397	chr13	46726869	46728248	+	0	NA	intron (NM_026056, intron 7 of 12)	intron (NM_026056, intron 7 of 12)	-37333	NM_001033192	97863	Mm.275934	NM_001033192	ENSMUSG00000069237	C78339	-	expressed sequence C78339	protein-coding
common_peak1-18517-41-49-0.0572925150739358-0.320382596085891	chr8	90876724	90877925	+	0	NA	intron (NM_012047, intron 5 of 16)	ORR1B1|LTR|MaLR	8766	NM_012047	26992	Mm.5400	NM_012047		Brd7	BP75|CELTIX1|Ptpn13ip	bromodomain containing 7	protein-coding
common_peak2-25874-16-15-0.118263642268062-0.328191099940264	chr19	43918929	43919505	+	0	NA	Intergenic	Intergenic	5924	NR_033472	100038628	Mm.212585	NR_033472	ENSMUSG00000074828	Gm10768	ENSMUSG00000074828	predicted gene 10768	ncRNA
common_peak2-29834-17-11-0.633333837483882-0.769930178837768	chr6	94284188	94284757	+	0	NA	Intergenic	Intergenic	-50561	NM_001286785	14924	Mm.217216	NM_010367	ENSMUSG00000045095	Magi1	AIP3|BAP1|Baiap1|Gukmi1|MAGI1c|Magi-1|TNRC19|WWP3|mKIAA4129	membrane associated guanylate kinase, WW and PDZ domain containing 1	protein-coding
unique_peak2-33766-4-7--1.02346051385325-1.09384600808989	chr11	118160954	118161285	+	0	NA	Intergenic	B4A|SINE|B4	-9561	NM_001033528	72344	Mm.232293	NM_001033528	ENSMUSG00000033909	Usp36	2700002L06Rik|mKIAA1453	ubiquitin specific peptidase 36	protein-coding
unique_peak2-36199-2-8--2.08737925770563-1.65811743852845	chr2	32775210	32775670	+	0	NA	intron (NM_146119, intron 8 of 13)	intron (NM_146119, intron 8 of 13)	41335	NM_199302	227738	Mm.248037	NM_199302	ENSMUSG00000026792	Lrsam1	-	leucine rich repeat and sterile alpha motif containing 1	protein-coding
common_peak2-22021-21-22-0.0459273092092225-0.319918318021793	chr12	59040061	59040653	+	0	NA	Intergenic	L1Md_T|LINE|L1	-272434	NM_009216	20605	Mm.278336	NM_009216		Sstr1	SRIF-2|SS-1-R|SS1-R|SS1R|Smstr-1|Smstr1|sst1	somatostatin receptor 1	protein-coding
unique_peak1-2958-7-9--0.522837264589173-1.05908390183068	chr17	71191446	71192080	+	0	NA	Intergenic	B1_Mur2|SINE|Alu	4354	NM_001164077	21815	Mm.101034	NM_009372	ENSMUSG00000047407	Tgif1	AA959811|AI462167|Tgif	TGFB-induced factor homeobox 1	protein-coding
unique_peak2-35803-5-6--0.511735258063458-0.947717972411649	chr18	60756558	60756923	+	0	NA	intron (NM_177340, intron 2 of 2)	intron (NM_177340, intron 2 of 2)	-5370	NM_133363	170947	Mm.159257	NM_133363		Myoz3	4833419K08Rik|Fatz-3	myozenin 3	protein-coding
common_peak1-16431-15-10-0.552733131918359-0.604422558181019	chr5	134455027	134455689	+	0	NA	Intergenic	B3A|SINE|B2	-120260	NM_030719	80909	Mm.45218	NM_030719		Gatsl2	7530428J21Rik|AW742413|Gats|Gatsl1	GATS protein-like 2	protein-coding
common_peak1-10013-12-16--0.4386868561627-0.368541233333383	chr13	6193164	6193811	+	0	NA	Intergenic	(TC)n|Simple_repeat|Simple_repeat	332752	NM_011803	23849	Mm.275036	NM_011803	ENSMUSG00000000078	Klf6	AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9	Kruppel-like factor 6	protein-coding
unique_peak1-6574-7-1-1.79909083029819-1.80617997398389	chr7	139245428	139245900	+	0	NA	intron (NM_018867, intron 11 of 13)	MT2A|LTR|ERVL	87521	NM_173410	233919	Mm.208740	NM_173410		Gpr26	9630036A11Rik|A730021D22	G protein-coupled receptor 26	protein-coding
common_peak2-32026-15-17--0.157760250886656-0.307611222530528	chr9	75775004	75775794	+	0	NA	Intergenic	Intergenic	-87385	NM_173731	208982	Mm.82306	NM_173731	ENSMUSG00000007908	Hmgcll1	BC037381	3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1	protein-coding
common_peak1-18583-20-26--0.266812717572275-0.373496418836697	chr8	106138141	106138866	+	0	NA	intron (NR_045730, intron 1 of 4)	intron (NR_045730, intron 1 of 4)	10804	NR_045730	71058	Mm.67707	NR_045730		4933400L20Rik	-	RIKEN cDNA 4933400L20 gene	ncRNA
common_peak2-29280-23-25-0.0213277863679888-0.30528805757448	chr5	143112455	143113063	+	0	NA	intron (NM_178398, intron 1 of 11)	B1F2|SINE|Alu	7221	NM_178398	74781	Mm.29432	NM_178398		Wipi2	1110018O08Rik|2510001I10Rik	WD repeat domain, phosphoinositide interacting 2	protein-coding
common_peak2-27457-77-153--0.482259961138904-1.83454128498202	chr3	90508837	90509830	+	0	NA	Intergenic	L1_Rod|LINE|L1	-9690	NM_009114	20202	Mm.2128	NM_009114	ENSMUSG00000056071	S100a9	60B8Ag|AW546964|BEE22|Cagb|GAGB|L1Ag|MRP14|p14	S100 calcium binding protein A9 (calgranulin B)	protein-coding
unique_peak1-6548-15-6-1.20480982849805-1.32521814697968	chr7	127932460	127933124	+	0	NA	intron (NM_177697, intron 21 of 33)	G-rich|Low_complexity|Low_complexity	49721	NM_177697	233813	Mm.389939	NM_177697	ENSMUSG00000030889	Vwa3a	E030013G06Rik	von Willebrand factor A domain containing 3A	protein-coding
common_peak1-14670-12-15--0.351224014912361-0.332077462497413	chr3	60498795	60499343	+	0	NA	Intergenic	Intergenic	193895	NM_001253708	56758	Mm.255723	NM_020007	ENSMUSG00000027763	Mbnl1	Mbnl|mKIAA0428	muscleblind-like 1 (Drosophila)	protein-coding
common_peak1-11840-15-13-0.204809828498052-0.368541233333383	chr16	87440347	87441036	+	0	NA	5' UTR (NM_016924, exon 1 of 5)	5' UTR (NM_016924, exon 1 of 5)	146	NM_016924	53858	Mm.162406	NM_016924	ENSMUSG00000041079	Rwdd2b	ORF5	RWD domain containing 2B	protein-coding
common_peak1-9320-36-33-0.391858244917415-0.703513783457792	chr11	94629420	94630582	+	0	NA	Intergenic	B4A|SINE|B4	-7505	NM_001105561	217122	Mm.24063	NM_183153		Gm11545	A430060F13Rik|C86086|OTTMUSG00000002043	predicted gene 11545	protein-coding
common_peak2-19853-30-8-1.99975040804956-4.4860419630448	chr1	91456082	91456581	+	0	NA	intron (NM_001037136, intron 1 of 16)	(TCC)n|Simple_repeat|Simple_repeat	104945	NM_001037136	347722	Mm.291135	NM_178119	ENSMUSG00000055013	Agap1	Centg2|Ggap1|R75364|mKIAA1099	ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	protein-coding
common_peak2-20767-57-113--0.566856974085812-1.79119494269044	chr10	116580858	116582221	+	0	NA	intron (NM_177798, intron 1 of 9)	intron (NM_177798, intron 1 of 9)	3991	NM_177798	327826	Mm.135965	NM_177798	ENSMUSG00000020170	Frs2	4732458E18|C330018A15Rik|Frs2alpha|SNT1	fibroblast growth factor receptor substrate 2	protein-coding
unique_peak2-33179-2-4--1.23938235115068-0.931118710592187	chr10	95767877	95768210	+	0	NA	Intergenic	Intergenic	79202	NR_110448	74881	Mm.410819	NR_110448		4930459C07Rik	-	RIKEN cDNA 4930459C07 gene	ncRNA
common_peak1-17897-15-16--0.075298090694683-0.301029995663976	chr7	120865906	120866718	+	0	NA	Intergenic	Intergenic	-43200	NM_145584	233744	Mm.334160	NM_145584	ENSMUSG00000038156	Spon1	AI666765|AW455831|BC020531|D330035F22Rik|FSP	spondin 1, (f-spondin) extracellular matrix protein	protein-coding
common_peak1-14138-26-46--0.626689759519175-1.0379745517287	chr2	131262265	131263182	+	0	NA	Intergenic	Intergenic	-54875	NM_001177834	228608	Mm.136586	NM_145533	ENSMUSG00000027333	Smox	B130066H01Rik|PAO|PAOh1|SMO	spermine oxidase	protein-coding
common_peak1-11824-31-32-0.18084455145467-0.379775532323848	chr16	78264182	78265449	+	0	NA	Intergenic	B1F1|SINE|Alu	-9116	NR_045698	100503619	Mm.387531	NR_045698		E330011O21Rik	-	RIKEN cDNA E330011O21 gene	ncRNA
common_peak2-30157-63-109--0.34304712245407-0.838382413282744	chr6	146887700	146889538	+	0	NA	intron (NM_001170433, intron 2 of 27)	intron (NM_001170433, intron 2 of 27)	14324	NM_001164236	73344	Mm.391543	NM_028509	ENSMUSG00000040163	1700034J05Rik	-	RIKEN cDNA 1700034J05 gene	protein-coding
common_peak1-13131-17-16-0.130833496954699-0.356936432242225	chr19	9081992	9082773	+	0	NA	exon (NM_009643, exon 5 of 5)	exon (NM_009643, exon 5 of 5)	18608	NM_001286518	66395	Mm.203866	NM_009643	ENSMUSG00000069833	Ahnak	DY6	AHNAK nucleoprotein (desmoyokin)	protein-coding
common_peak1-11944-80-99-0.206719576594628-0.561037476851935	chr17	4767998	4770398	+	0	NA	Intergenic	Intergenic	-225876	NM_001085355	239985	Mm.133401	NM_001085355	ENSMUSG00000069729	Arid1b	8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235	AT rich interactive domain 1B (SWI-like)	protein-coding
common_peak2-30262-50-62-0.0636603929790356-0.328177820381495	chr7	15921895	15922919	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-51793	NM_145708	246792	Mm.26391	NM_145708	ENSMUSG00000074369	Obox2	-	oocyte specific homeobox 2	protein-coding
common_peak2-23180-23-46--0.832821347168557-1.52341724501299	chr15	39942980	39944252	+	0	NA	Intergenic	Intergenic	-22295	NM_001256056	328531	Mm.60703	NM_001256056		9330182O14Rik	-	RIKEN cDNA 9330182O14 gene	protein-coding
common_peak2-23657-21-14-0.662598669657717-0.879255460030357	chr15	85041183	85041888	+	0	NA	intron (NM_010180, intron 1 of 16)	intron (NM_010180, intron 1 of 16)	5097	NM_010180	14114	Mm.297992	NM_010180	ENSMUSG00000006369	Fbln1	-	fibulin 1	protein-coding
unique_peak1-3966-11-5-0.923731083530457-1.477227296591	chr2	31256414	31256987	+	0	NA	Intergenic	ID_B1|SINE|B4	-69090	NM_007494	11898	Mm.3217	NM_007494	ENSMUSG00000076441	Ass1	AA408052|ASS|Ass-1|fold	argininosuccinate synthetase 1	protein-coding
common_peak2-32269-33-82--1.0437018688214-3.50592567293368	chrX	12761247	12762834	+	0	NA	Intergenic	B2_Mm1a|SINE|B2	51369	NR_045430	72122	Mm.75434	NR_045429		2010308F09Rik	-	RIKEN cDNA 2010308F09 gene	ncRNA
common_peak2-19937-7-9--0.522837264589173-1.05908390183068	chr1	128103317	128103765	+	0	NA	intron (NM_172484, intron 5 of 14)	intron (NM_172484, intron 5 of 14)	285963	NM_172484	210356	Mm.377234	NM_172484	ENSMUSG00000049690	Nckap5	8430408F21|D130011D22Rik|E030049G20Rik|Erih1|Erih2|Gm1548|Nap5	NCK-associated protein 5	protein-coding
common_peak2-21960-64-91--0.0581155543484098-0.3119485245501	chr12	35046658	35047953	+	0	NA	intron (NM_001271386, intron 14 of 27)	intron (NM_001271386, intron 14 of 27)	166449	NM_024124	79221	Mm.310551	NM_024124	ENSMUSG00000004698	Hdac9	AV022454|D030072B18Rik|HD7B|HD9|HDRP|Hdac7b|Mitr|mKIAA0744	histone deacetylase 9	protein-coding
common_peak1-18340-44-22-1.29833087851152-3.78802519259418	chr8	65045995	65047356	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-383354	NM_001252620	72902	Mm.334552	NM_023689	ENSMUSG00000054162	Spock3	2900045C01Rik|AI428471|mKIAA4039	sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	protein-coding
common_peak1-7601-64-115--0.392534593418969-1.08315020895014	chr1	58423285	58424281	+	0	NA	intron (NM_001008419, intron 34 of 35)	intron (NM_001008419, intron 34 of 35)	-26197	NM_025824	66882	Mm.21848	NM_025824	ENSMUSG00000051223	Bzw1	1200015E15Rik|mKIAA0005	basic leucine zipper and W2 domains 1	protein-coding
common_peak1-15177-36-36-0.269867720538804-0.51862626278861	chr3	152346109	152347144	+	0	NA	Intergenic	(TTC)n|Simple_repeat|Simple_repeat	-15522	NM_001081277	229949	Mm.207057	NM_001081277	ENSMUSG00000039058	Ak5	-	adenylate kinase 5	protein-coding
common_peak2-32009-118-163-0.166240678504491-0.577169690232094	chr9	72110879	72112304	+	0	NA	Intergenic	RMER10B|LTR|ERVL	-11115	NM_146224	235469	Mm.242791	NM_146224	ENSMUSG00000038535	Zfp280d	A930005F02Rik|BC027163|Suhw4|ZNF634|Znf280d	zinc finger protein 280D	protein-coding
common_peak1-12572-162-157-0.770638792308199-6.87259725967503	chr18	11052350	11055478	+	0	NA	intron (NM_010258, intron 1 of 6)	intron (NM_010258, intron 1 of 6)	-1349	NR_105023	68434	Mm.57626	NR_105022	ENSMUSG00000097222	1010001N08Rik	-	RIKEN cDNA 1010001N08 gene	ncRNA
unique_peak2-33788-4-7--1.02346051385325-1.09384600808989	chr11	119913010	119913366	+	0	NA	Intergenic	Intergenic	-4729	NM_007377	11302	Mm.6826	NM_007377	ENSMUSG00000025375	Aatk	AATYK|aatyk1|mKIAA0641	apoptosis-associated tyrosine kinase	protein-coding
unique_peak2-38002-8-12--0.695217300193522-0.475924844171029	chr6	29308175	29308861	+	0	NA	intron (NM_184053, intron 2 of 6)	intron (NM_184053, intron 2 of 6)	10412	NM_184053	12321	Mm.392075	NM_007594	ENSMUSG00000029767	Calu	9530075H20Rik	calumenin	protein-coding
common_peak2-31341-51-8-2.90499882416026-11.820416592976	chr8	84021297	84021663	+	0	NA	intron (NM_001297596, intron 2 of 24)	Lx3A|LINE|L1	155019	NM_001297593	234515	Mm.324468	NM_001024617	ENSMUSG00000037940	Inpp4b	E130107I17Rik	inositol polyphosphate-4-phosphatase, type II	protein-coding
common_peak2-31206-10-10--0.103016273628528-0.301029995663987	chr8	61606468	61606931	+	0	NA	Intergenic	Intergenic	216147	NM_173411	234290	Mm.39244	NM_173411	ENSMUSG00000049946	BC030500	-	cDNA sequence BC030500	protein-coding
common_peak2-29217-26-17-0.75797409071615-1.09210977391291	chr5	137501666	137502413	+	0	NA	Intergenic	Intergenic	-4126	NM_001039385	381677	Mm.389697	NM_001039385	ENSMUSG00000037428	Vgf	Gm1052	VGF nerve growth factor inducible	protein-coding
common_peak2-28667-12-10-0.189344366450341-0.386243247519795	chr5	31647596	31648039	+	0	NA	intron (NR_105788, intron 7 of 7)	L1_Mus2|LINE|L1	47863	NM_144909	231103	Mm.100043	NM_144909	ENSMUSG00000059434	Gckr	GKRP	glucokinase regulatory protein	protein-coding
common_peak1-16957-16-10-0.658832023630764-0.699649909729472	chr6	85332315	85332999	+	0	NA	Intergenic	RLTR18B|LTR|ERVK	-8029	NM_001003955	52055	Mm.220334	NM_177466	ENSMUSG00000051343	Rab11fip5	9130206P09Rik|C75969|D6Ertd32e|GAF1|RIP11	RAB11 family interacting protein 5 (class I)	protein-coding
unique_peak2-33411-5-17--1.87430533744817-1.80287260729378	chr11	57962276	57962938	+	0	NA	intron (NM_001166669, intron 11 of 27)	(TG)n|Simple_repeat|Simple_repeat	19434	NM_172558	216766	Mm.275349	NM_172558	ENSMUSG00000037275	Gemin5	AA407055|AA407208|AI451603|BB194447|C330013N08	gem (nuclear organelle) associated protein 5	protein-coding
common_peak2-30134-60-70-0.204544742115849-0.506962665446446	chr6	140423484	140425152	+	0	NA	intron (NM_144920, intron 3 of 30)	intron (NM_144920, intron 3 of 30)	51698	NM_144920	109135	Mm.247670	NM_144920	ENSMUSG00000030231	Plekha5	2810431N21Rik|AI428202|AK129423|AMH-Cre|Ayu21-9|Gt(pU21)9Imeg|Pepp2|Tg(AMH-cre)1Flor	pleckstrin homology domain containing, family A member 5	protein-coding
common_peak1-16656-28-26-0.298071617657994-0.481798116163919	chr6	113442435	113443184	+	0	NA	TTS (NM_172487)	TTS (NM_172487)	9003	NM_172487	210673	Mm.133060	NM_172487	ENSMUSG00000045009	Prrt3	6330505P20|B230206N24Rik	proline-rich transmembrane protein 3	protein-coding
common_peak1-18028-53-50-0.468547670444433-1.09647263857051	chr7	142470230	142472498	+	0	NA	Intergenic	L1Md_F2|LINE|L1	11062	NM_001163611	100043254	Mm.192092	NM_001163611	ENSMUSG00000073804	Nps	ENSMUSG00000073804	neuropeptide S	protein-coding
common_peak1-13181-11-26--1.24619391791185-1.66030262873422	chr19	16780348	16781028	+	0	NA	intron (NM_173028, intron 27 of 71)	intron (NM_173028, intron 27 of 71)	74735	NM_173028	271564	Mm.211963	NM_173028	ENSMUSG00000046230	Vps13a	4930425F11|4930516E05Rik|4930543C13Rik|9930023P20|Chac|Chorein|D330038K10Rik|mKIAA0986	vacuolar protein sorting 13A (yeast)	protein-coding
unique_peak2-38738-4-8--1.19338551529556-1.21878474469819	chr7	113207507	113208023	+	0	NA	Intergenic	L1_Mur1|LINE|L1	13613	NR_030720	668128	Mm.484022	NR_030720		Gm8989	EG668128|Gm21911	very large inducible GTPase 1 pseudogene	pseudo
common_peak1-15722-59-119--0.581526594735941-1.97152429233126	chr4	141546001	141547231	+	0	NA	intron (NM_177868, intron 3 of 31)	ID_B1|SINE|B4	7709	NR_040672	545691	Mm.332015	NR_040672	ENSMUSG00000085424	Fhad1os1	Gm13037|OTTMUSG00000010113	forkhead-associated (FHA) phosphopeptide binding domain 1, opposite strand 1	ncRNA
unique_peak1-6272-7-4-0.477162735410827-1.09384600808989	chr7	25462402	25462925	+	0	NA	Intergenic	Lx4A|LINE|L1	-5594	NM_019981	56746	Mm.23385	NM_019981	ENSMUSG00000062773	Tex101	1700008H15Rik|AI429076|TES101RP	testis expressed gene 101	protein-coding
common_peak2-29806-21-21-0.110057646628938-0.344491671143527	chr6	91116088	91116856	+	0	NA	intron (NM_144919, intron 5 of 9)	intron (NM_144919, intron 5 of 9)	9663	NM_144919	232232	Mm.206218	NM_144919	ENSMUSG00000034245	Hdac11	-	histone deacetylase 11	protein-coding
common_peak2-30678-15-8-0.842239749113344-0.891319708951327	chr7	105735819	105736210	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	69065	NM_172280	233545	Mm.387819	NM_172280	ENSMUSG00000035401	2210018M11Rik	2310016L09Rik|AU019521|AU019557|Emsy	RIKEN cDNA 2210018M11 gene	protein-coding
unique_peak1-3690-14-8-0.729291158915332-0.771068449301682	chr19	43530973	43531768	+	0	NA	intron (NM_031396, intron 1 of 10)	intron (NM_031396, intron 1 of 10)	16444	NM_031396	83674	Mm.329864	NM_031396	ENSMUSG00000025189	Cnnm1	AI846314|Acdp1|CLP-1	cyclin M1	protein-coding
unique_peak1-1665-14-3-1.89921616035764-2.80787975886178	chr13	63642819	63643409	+	0	NA	intron (NM_008957, intron 8 of 22)	intron (NM_008957, intron 8 of 22)	23714	NM_008957	19206	Mm.228798	NM_008957	ENSMUSG00000021466	Ptch1	A230106A15Rik|Ptc|Ptc1|Ptch|mes	patched homolog 1	protein-coding
common_peak1-18127-10-12--0.344024373132323-0.340565874754526	chr8	8606214	8606786	+	0	NA	Intergenic	Intergenic	54273	NM_010111	13642	Mm.209813	NM_010111	ENSMUSG00000001300	Efnb2	ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1	ephrin B2	protein-coding
unique_peak1-4454-7-0-2.79909083029819-2.40823996531185	chr2	173615027	173615472	+	0	NA	Intergenic	Intergenic	52177	NM_019806	56491	Mm.260456	NM_019806	ENSMUSG00000054455	Vapb	AI225786|AI840687|AI848259|D2Abb2e|R75548|VAP33b|Vamp33b	vesicle-associated membrane protein, associated protein B and C	protein-coding
unique_peak2-37304-3-5--0.998945590680433-0.96108193396963	chr4	123283308	123283613	+	0	NA	intron (NM_001199136, intron 1 of 97)	intron (NM_001199136, intron 1 of 97)	-10203	NR_105824	102465214		NR_105824	miRBase:MI0021934	Mir6398	mmu-mir-6398	microRNA mir-6398	ncRNA
common_peak1-17252-64-93--0.0891424499690343-0.331026524252985	chr6	131292521	131294031	+	0	NA	Intergenic	RSINE1|SINE|B4	-29431	NM_172891	243659	Mm.20114	NM_172891	ENSMUSG00000032899	Styk1	9130025L13|AI326477|Nok	serine/threonine/tyrosine kinase 1	protein-coding
common_peak2-27670-58-104--0.418295582775626-1.04497728052195	chr3	110249908	110251553	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-196813	NR_024139	99890	Mm.36115	NM_178891	ENSMUSG00000049300	Prmt6	AW124876|BB233495|Hrmt1l6	protein arginine N-methyltransferase 6	protein-coding
common_peak2-32098-10-7-0.356415345008769-1.12966497611638	chr9	99414061	99414541	+	0	NA	intron (NM_028768, intron 12 of 21)	intron (NM_028768, intron 12 of 21)	43461	NR_028123	69797	Mm.307159	NR_028123		1600029I14Rik	-	RIKEN cDNA 1600029I14 gene	ncRNA
common_peak2-28606-16-16-0.0308008010177225-0.307611222530525	chr5	23783214	23783770	+	0	NA	Intergenic	Intergenic	20146	NR_030454	735274		NR_030454		Mir684-1	Mirn684-1	microRNA 684-1	ncRNA
common_peak1-13491-25-15-0.861849905345106-1.28534286439186	chr2	32259374	32260324	+	0	NA	Intergenic	ORR1A2|LTR|MaLR	8439	NM_133783	96979	Mm.28048	NM_133783	ENSMUSG00000026820	Ptges2	0610038H10Rik|C79137|Gbf1|Mpges2|Pges2	prostaglandin E synthase 2	protein-coding
unique_peak2-35765-2-4--1.23938235115068-0.931118710592187	chr18	42591190	42591480	+	0	NA	Intergenic	Intergenic	37084	NM_138945	18998	Mm.488204	NM_138945		Pou4f3	Brn3.1|Brn3c|ddl|dreidel	POU domain, class 4, transcription factor 3	protein-coding
unique_peak1-1594-26-3-2.92789909215846-5.86906124235393	chr13	34398308	34399094	+	0	NA	intron (NM_001033167, intron 1 of 10)	intron (NM_001033167, intron 1 of 10)	38350	NM_001033167	73102	Mm.23932	NM_001033167	ENSMUSG00000038267	Slc22a23	3110004L20Rik	solute carrier family 22, member 23	protein-coding
common_peak1-19346-52-90--0.399534649932997-0.905069649695056	chrX	8096435	8097509	+	0	NA	intron (NM_001126491, intron 4 of 5)	IAPEz-int|LTR|ERVK	5108	NM_001126491	546263	Mm.475615	NM_001126491	ENSMUSG00000079704	Gm14459	OTTMUSG00000016698	predicted gene 14459	protein-coding
common_peak1-19136-12-23--0.936186515633517-0.912223620338476	chr9	80165021	80165625	+	0	NA	intron (NM_022016, intron 15 of 16)	intron (NM_022016, intron 15 of 16)	152482	NM_001039546	17920	Mm.4040	NM_008662	ENSMUSG00000033577	Myo6	BC029719|Tlc|sv	myosin VI	protein-coding
unique_peak2-38871-5-6--0.511735258063458-0.947717972411649	chr8	4226981	4227311	+	0	NA	intron (NM_028175, intron 1 of 2)	intron (NM_028175, intron 1 of 2)	319	NM_028175	72267	Mm.25479	NM_028175	ENSMUSG00000046589	Lrrc8e	1810049O03Rik|C87354	leucine rich repeat containing 8 family, member E	protein-coding
common_peak2-28774-19-23--0.18227517405947-0.320777457303847	chr5	52834071	52834893	+	0	NA	intron (NM_001256059, intron 1 of 11)	RLTR1D|LTR|ERV1	28300	NM_001256059	100503884	Mm.332379	NM_001256059	ENSMUSG00000045790	Ccdc149	Gm447	coiled-coil domain containing 149	protein-coding
common_peak2-23269-7-5-0.214128329577033-1.01466476204226	chr15	25914878	25915226	+	0	NA	intron (NM_144523, intron 1 of 5)	intron (NM_144523, intron 1 of 5)	931	NM_144523	52521	Mm.29145	NM_144523	ENSMUSG00000052253	Zfp622	1110033B05Rik|D15Ertd806e|ZPR9|Znf622	zinc finger protein 622	protein-coding
common_peak2-20926-31-48--0.389471173302085-0.611014125894502	chr11	6415807	6416768	+	0	NA	exon (NM_178440, exon 8 of 22)	exon (NM_178440, exon 8 of 22)	4674	NM_178440	246177	Mm.239554	NM_178440	ENSMUSG00000020437	Myo1g	E430002D17Rik	myosin IG	protein-coding
unique_peak2-36346-4-6--0.830815435910851-0.989110657569874	chr2	92599989	92600450	+	0	NA	Intergenic	RMER16|LTR|ERVK	-155039	NM_030725	80976	Mm.33490	NM_030725	ENSMUSG00000027220	Syt13	5730409J20Rik|AI549909|mKIAA1427	synaptotagmin XIII	protein-coding
unique_peak2-32680-11-16--0.578769256998726-0.503257505534083	chr1	136234044	136234703	+	0	NA	Intergenic	Intergenic	-4868	NM_001144855	68507	Mm.295105	NM_001144855	ENSMUSG00000026458	Ppfia4	1110008G13Rik|AI448359|AI852265|C81506	protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4	protein-coding
common_peak2-31446-17-17-0.0483713367627256-0.325169893479371	chr8	104436480	104437055	+	0	NA	Intergenic	Intergenic	872244	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
unique_peak2-40000-7-6--0.00826409175941478-0.97990265578305	chrX	164976142	164976541	+	0	NA	intron (NM_001033330, intron 1 of 19)	intron (NM_001033330, intron 1 of 19)	38824	NM_001033330	333605	Mm.426168	NM_001033330	ENSMUSG00000049176	Frmpd4	Gm196|PKAP1|Pdzd10|Pdzk10|Preso1|preso	FERM and PDZ domain containing 4	protein-coding
common_peak2-31763-13-18--0.469455482805817-0.409888142029227	chr9	21337740	21338471	+	0	NA	intron (NM_206536, intron 2 of 5)	intron (NM_206536, intron 2 of 5)	7484	NM_001198794	382062	Mm.325205	NM_206536	ENSMUSG00000057191	AB124611	Gm1706	cDNA sequence AB124611	protein-coding
common_peak2-24855-8-7-0.00522241794757061-1.00793137938329	chr17	78217366	78217776	+	0	NA	Intergenic	L1MB7|LINE|L1	-382017	NM_015800	50766	Mm.311912	NM_015800	ENSMUSG00000024074	Crim1	AU015004	cysteine rich transmembrane BMP regulator 1 (chordin like)	protein-coding
common_peak1-12130-21-45--0.954072690790778-1.71114535657706	chr17	27038607	27039356	+	0	NA	Intergenic	Lx3C|LINE|L1	-15055	NM_053173	16580	Mm.491138	NM_016761	ENSMUSG00000024301	Kifc5b	Hset|KNSL2|Kifc5a	kinesin family member C5B	protein-coding
common_peak1-9448-9-0-3.18961340640422-3.01029995663981	chr11	103067177	103067608	+	0	NA	intron (NM_001254724, intron 1 of 9)	L1MC1|LINE|L1	2470	NM_001254724	69441	Mm.380648	NM_027082	ENSMUSG00000020940	1700023F06Rik	-	RIKEN cDNA 1700023F06 gene	protein-coding
unique_peak1-6699-9-3-1.18961340640422-1.57096726280955	chr8	33978049	33978617	+	0	NA	Intergenic	Intergenic	82165	NM_001177589	100042715	Mm.291093	NM_001177589		Gm3985	-	predicted gene 3985	protein-coding
common_peak2-31630-62-103--0.289688259339007-0.675836349268218	chr8	123373028	123374544	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	113510	NM_008320	15900	Mm.334861	NM_008320	ENSMUSG00000041515	Irf8	AI893568|ICSBP|IRF-8|Icsbp1|Myls	interferon regulatory factor 8	protein-coding
common_peak1-17514-11-12--0.191746133889479-0.310474156842889	chr7	27490878	27491408	+	0	NA	Intergenic	RLTRETN_Mm|LTR|ERVK	-19694	NM_001081148	243881	Mm.294678	NM_001081148	ENSMUSG00000040650	Cyp2b23	EG243881	cytochrome P450, family 2, subfamily b, polypeptide 23	protein-coding
common_peak1-13872-21-33--0.517973575984104-0.610902792227722	chr2	71528638	71529777	+	0	NA	Intergenic	Intergenic	-28267	NR_037979	381371	Mm.330284	NM_201366	ENSMUSG00000064263	Gm1631	-	predicted gene 1631	ncRNA
common_peak2-31536-29-71--1.0576349208272-3.00951212929436	chr8	111094087	111095266	+	0	NA	intron (NR_077224, intron 1 of 1)	RSINE1|SINE|B4	13901	NR_077224	109215	Mm.65282	NR_077224		3010033K07Rik	-	RIKEN cDNA 3010033K07 gene	ncRNA
common_peak2-25924-29-14-1.20539948500659-2.32006591355686	chr19	46479267	46479955	+	0	NA	intron (NM_001025391, intron 2 of 11)	B4A|SINE|B4	8225	NM_015752	24069	Mm.41210	NM_015752	ENSMUSG00000025231	Sufu	Su(fu)	suppressor of fused homolog (Drosophila)	protein-coding
common_peak2-30366-33-63--0.668662437474471-1.42573967311544	chr7	28435636	28436334	+	0	NA	Intergenic	(TAAA)n|Simple_repeat|Simple_repeat	-2958	NM_028417	73032	Mm.44095	NM_028417	ENSMUSG00000007944	Ttc9b	2900074C18Rik	tetratricopeptide repeat domain 9B	protein-coding
common_peak2-26941-9-5-0.604650905683064-1.21398586181642	chr2	164455733	164456114	+	0	NA	Intergenic	L1VL4|LINE|L1	8379	NM_001012723	277345	Mm.247244	NM_001012723	ENSMUSG00000070530	Wfdc16	BC043944|WAP16	WAP four-disulfide core domain 16	protein-coding
common_peak2-24414-68-143--0.599964222144016-2.41764904418593	chr17	15704078	15706140	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	-4822	NM_144809	213389	Mm.215162	NM_144809	ENSMUSG00000051977	Prdm9	BC012016|Dsbc1|G1-419-29|Meisetz|Rcr1|repro7	PR domain containing 9	protein-coding
common_peak2-31262-28-35--0.11696588162085-0.313805205020546	chr8	70896693	70897507	+	0	NA	TTS (NR_038189)	TTS (NR_038189)	4742	NR_038181	73609	Mm.443247	NR_038181	ENSMUSG00000085197	1700125H03Rik	4930510D22Rik	RIKEN cDNA 1700125H03 gene	ncRNA
unique_peak2-35800-1-7--2.62705701021674-1.80617997398389	chr18	60526629	60526905	+	0	NA	Intergenic	Lx9|LINE|L1	-8916	NM_021792	60440	Mm.261140	NM_021792	ENSMUSG00000054072	Iigp1	2900074L10Rik|AI046432|AW111922|Ifgga1|Iigp|Irga6	interferon inducible GTPase 1	protein-coding
common_peak2-30433-3-8--1.58390809140159-1.39487600375387	chr7	44554192	44554622	+	0	NA	Intergenic	Intergenic	1965497	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak2-21318-95-104-0.433669827357892-1.58078477103936	chr11	75459335	75461225	+	0	NA	intron (NM_008916, intron 8 of 11)	intron (NM_008916, intron 8 of 11)	-4731	NM_008659	17913	Mm.234502	NM_008659	ENSMUSG00000017774	Myo1c	C80397|MMIb|MYO1E|NMI|mm1beta|myr2	myosin IC	protein-coding
common_peak2-31150-24-55--1.01414501928989-2.24341076832583	chr8	41239611	41241110	+	0	NA	Intergenic	Lx|LINE|L1	131947	NM_030610	80857	Mm.425526	NM_030610	ENSMUSG00000031603	Fgf20	-	fibroblast growth factor 20	protein-coding
common_peak1-17480-43-46-0.227974333846065-0.475408985215012	chr7	24457161	24458595	+	0	NA	Intergenic	L1Md_F2|LINE|L1	14543	NM_030735	81010	Mm.379267	NM_030735	ENSMUSG00000035523	Vmn1r172	V1rd9|V3R9	vomeronasal 1 receptor 172	protein-coding
common_peak1-7618-18-9-0.990991056340989-1.23014042908325	chr1	60409108	60409737	+	0	NA	intron (NM_030013, intron 2 of 12)	intron (NM_030013, intron 2 of 12)	9206	NM_030013	77951	Mm.197640	NM_030013		Cyp20a1	A930011N14Rik|Cypm	cytochrome P450, family 20, subfamily a, polypeptide 1	protein-coding
unique_peak1-7256-8-2-1.42025991722641-1.65811743852845	chr9	86737411	86737928	+	0	NA	intron (NM_001277982, intron 2 of 29)	RLTR20A2|LTR|ERVK	37563	NM_001277982	20616	Mm.281651	NM_013669	ENSMUSG00000033419	Snap91	91kDa|AP180|F1-20|mKIAA0656	synaptosomal-associated protein 91	protein-coding
common_peak1-16327-21-25--0.130950452874856-0.305461879681376	chr5	116024190	116025141	+	0	NA	intron (NM_172719, intron 3 of 57)	intron (NM_172719, intron 3 of 57)	-6293	NR_105996	102466790		NR_105996		Mir7029	mmu-mir-7029	microRNA mir-7029	ncRNA
common_peak1-18029-20-10-1.0286431659539-1.30248952876293	chr7	142481347	142482123	+	0	NA	Intergenic	Lx4A|LINE|L1	21433	NM_001163611	100043254	Mm.192092	NM_001163611	ENSMUSG00000073804	Nps	ENSMUSG00000073804	neuropeptide S	protein-coding
unique_peak1-5646-11-0-3.50869358425161-3.61235994796777	chr6	28483637	28484143	+	0	NA	intron (NM_019776, intron 9 of 23)	intron (NM_019776, intron 9 of 23)	53542	NM_019776	56463	Mm.439987	NM_019776	ENSMUSG00000001424	Snd1	AL033314|Tudor-SN	staphylococcal nuclease and tudor domain containing 1	protein-coding
unique_peak2-34644-0-26--5.59501843263768-6.57132529354008	chr14	104336855	104337124	+	0	NA	Intergenic	B3|SINE|B2	89370	NR_045953	73877	Mm.399172	NR_045953		4930432J09Rik	-	RIKEN cDNA 4930432J09 gene	ncRNA
unique_peak1-7243-9-3-1.18961340640422-1.57096726280955	chr9	77744742	77745257	+	0	NA	Intergenic	Intergenic	-20173	NM_134255	68801	Mm.430736	NM_134255	ENSMUSG00000032349	Elovl5	1110059L23Rik|AI747313|AU043003|HELO1	ELOVL family member 5, elongation of long chain fatty acids (yeast)	protein-coding
common_peak2-31380-15-14-0.105274154947137-0.330004445983672	chr8	85432181	85432847	+	0	NA	intron (NM_177378, intron 1 of 6)	intron (NM_177378, intron 1 of 6)	45259	NM_177378	330812	Mm.491438	NM_177378	ENSMUSG00000047747	Rnf150	A630007N06Rik|C030044C12Rik|Greul5|mKIAA1214	ring finger protein 150	protein-coding
unique_peak1-2198-11-5-0.923731083530457-1.477227296591	chr15	66844112	66844674	+	0	NA	Intergenic	Intergenic	-43190	NM_008681	17988	Mm.30837	NM_008681	ENSMUSG00000005125	Ndrg1	CAP43|CMT4D|DRG1|HMSNL|NMSL|Ndr1|Ndrl|PROXY1|RTP|TDD5	N-myc downstream regulated gene 1	protein-coding
common_peak2-24052-3-13--2.22133801201688-2.36932189928148	chr16	25426606	25427079	+	0	NA	Intergenic	Intergenic	139939	NM_175165	71338	Mm.126851	NM_175165	ENSMUSG00000048399	Tprg	5430420C16Rik|Tprg1	transformation related protein 63 regulated	protein-coding
unique_peak2-39435-2-8--2.08737925770563-1.65811743852845	chr9	44802681	44803088	+	0	NA	Intergenic	RLTR19-int|LTR|ERVK	13015	NM_013487	12500	Mm.4527	NM_013487	ENSMUSG00000032094	Cd3d	T3d	CD3 antigen, delta polypeptide	protein-coding
common_peak2-21645-17-25--0.482143379936054-0.479250674391597	chr11	101784050	101785212	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-28963	NM_010791	17285	Mm.3404	NM_010791	ENSMUSG00000001493	Meox1	AI385561|D330041M02Rik|Mox-1|Mox1	mesenchyme homeobox 1	protein-coding
common_peak1-19098-123-167-0.203505827228046-0.709139478620644	chr9	72110722	72112562	+	0	NA	Intergenic	RMER10B|LTR|ERVL	-11064	NM_146224	235469	Mm.242791	NM_146224	ENSMUSG00000038535	Zfp280d	A930005F02Rik|BC027163|Suhw4|ZNF634|Znf280d	zinc finger protein 280D	protein-coding
common_peak1-13052-16-25--0.58217607587303-0.633951497070961	chr19	5912065	5912747	+	0	NA	intron (NM_011262, intron 1 of 10)	CpG	465	NM_011262	19708	Mm.2651	NM_011262	ENSMUSG00000024826	Dpf2	2210010M07Rik|BAF45D|Req|ubi-d4	D4, zinc and double PHD fingers family 2	protein-coding
unique_peak1-3196-10-0-3.35641534500877-3.31132995230379	chr18	53865615	53866166	+	0	NA	TTS (NR_040349)	TTS (NR_040349)	38311	NM_178686	225523	Mm.193678	NM_178686	ENSMUSG00000048799	Cep120	A230075C01|AU016693|Ccdc100	centrosomal protein 120	protein-coding
common_peak1-8394-37-79--0.795935023401544-2.21542829695182	chr10	67096134	67097238	+	0	NA	Intergenic	Intergenic	-84983	NM_001005419	211488	Mm.297250	NM_001005419	ENSMUSG00000057134	Ado	Gm237	2-aminoethanethiol (cysteamine) dioxygenase	protein-coding
common_peak2-23241-21-23--0.0154732354549205-0.305650498375555	chr15	9140541	9141346	+	0	NA	Intergenic	L1_Mm|LINE|L1	-55762	NM_001285980	27401	Mm.35584	NM_013787	ENSMUSG00000054115	Skp2	FBXL1|FWD1|p45	S-phase kinase-associated protein 2 (p45)	protein-coding
unique_peak1-2340-8-2-1.42025991722641-1.65811743852845	chr15	85010513	85011046	+	0	NA	Intergenic	(TC)n|Simple_repeat|Simple_repeat	-24217	NR_040360	100502602	Mm.390830	NR_040360		Gm19277	-	predicted gene, 19277	ncRNA
common_peak1-9080-51-61-0.120727515215698-0.362125042338591	chr11	69661739	69663370	+	0	NA	intron (NR_033133, intron 5 of 6)	intron (NR_033133, intron 5 of 6)	2408	NR_033133	70310	Mm.28874	NM_023564	ENSMUSG00000019461	Plscr3	2210403O21Rik|2610037N06Rik|ESTM3|X83310	phospholipid scramblase 3	protein-coding
unique_peak2-35791-4-6--0.830815435910851-0.989110657569874	chr18	56562039	56562471	+	0	NA	Intergenic	RMER6D|LTR|ERVK	-29531	NM_026240	107022	Mm.24356	NM_026240	ENSMUSG00000001700	Gramd3	9030613F08Rik|9130427A09Rik|AW061306|NS3TP2	GRAM domain containing 3	protein-coding
common_peak1-16606-39-77--0.669640971943095-1.66351452419096	chr5	150664738	150665666	+	0	NA	intron (NR_045758, intron 3 of 3)	intron (NR_045758, intron 3 of 3)	14880	NR_045758	70969	Mm.78499	NR_045758		4930500F04Rik	4931407C17Rik	RIKEN cDNA 4930500F04 gene	ncRNA
common_peak1-10661-43-40-0.425011180905619-0.817484656603571	chr14	48445941	48446905	+	0	NA	Intergenic	Intergenic	-72116	NR_045959	73961	Mm.390702	NR_045959		4930447J18Rik	4930425M13Rik	RIKEN cDNA 4930447J18 gene	ncRNA
common_peak1-17243-23-11-1.13680500378792-1.66030262873422	chr6	128549088	128550252	+	0	NA	Intergenic	Intergenic	-18046	NM_001001179	232400	Mm.259234	NM_001001179	ENSMUSG00000047228	BC048546	Ovos	cDNA sequence BC048546	protein-coding
common_peak2-22483-22-25--0.0531556130536872-0.301029995663976	chr13	49215416	49216625	+	0	NA	intron (NM_029361, intron 2 of 27)	B4A|SINE|B4	27677	NM_029361	75607	Mm.342723	NM_029361	ENSMUSG00000037989	Wnk2	1810073P09Rik|AW122246|ESTM15|X83337|mKIAA1760	WNK lysine deficient protein kinase 2	protein-coding
common_peak1-10608-83-79-0.592294530218764-2.23060001589935	chr14	32049169	32051455	+	0	NA	TTS (NM_027949)	TTS (NM_027949)	14092	NM_027949	71838	Mm.5348	NM_027949	ENSMUSG00000021902	Phf7	1700006H01Rik|1700010P14Rik|AI427892|AW555949	PHD finger protein 7	protein-coding
unique_peak1-3156-14-1-2.89921616035764-3.91338994363176	chr18	37923467	37924121	+	0	NA	exon (NM_033580, exon 1 of 4)	exon (NM_033580, exon 1 of 4)	-1440	NM_033595	93724	Mm.247203	NM_033595	ENSMUSG00000023036	Pcdhga12	Pcdh13|pc2c	protocadherin gamma subfamily A, 12	protein-coding
unique_peak1-2587-8-0-3.00522241794757-2.70926996097583	chr16	31281868	31282390	+	0	NA	Intergenic	Intergenic	-6346	NR_035427	100316676		NR_035427	miRBase:MI0006303	Mir1195	Mirn1195|mmu-mir-1195	microRNA 1195	ncRNA
unique_peak1-5199-18-2-2.7279566505072-4.01305082679061	chr5	34032906	34033789	+	0	NA	Intergenic	Intergenic	-31026	NM_001205270	14184	Mm.6904	NM_008010	ENSMUSG00000054252	Fgfr3	CD333|FR3|Fgfr-3|Flg-2|HBGFR|Mfr3|sam3	fibroblast growth factor receptor 3	protein-coding
unique_peak2-38433-0-6--3.64748585253182-1.56314192529759	chr7	25784841	25785275	+	0	NA	intron (NM_001290469, intron 4 of 22)	B3|SINE|B2	5898	NM_001290469	232975	Mm.44101	NM_144921	ENSMUSG00000040907	Atp1a3	Atpa-2	ATPase, Na+/K+ transporting, alpha 3 polypeptide	protein-coding
common_peak1-11438-18-8-1.14299414978604-1.45476480588849	chr15	100422290	100423205	+	0	NA	Intergenic	Intergenic	-5951	NM_010127	19009	Mm.28825	NM_010127	ENSMUSG00000009739	Pou6f1	2310038G18Rik|Brn5.0|C79593|Emb|cns-1	POU domain, class 6, transcription factor 1	protein-coding
unique_peak1-4820-8-3-1.00522241794757-1.39487600375387	chr3	144666136	144666615	+	0	NA	Intergenic	(CAAAA)n|Simple_repeat|Simple_repeat	-28366	NM_207208	99663	Mm.442050	NM_207208	ENSMUSG00000068547	Clca6	9130020L07Rik|AI504701|Clca4	chloride channel calcium activated 6	protein-coding
common_peak2-28212-43-47-0.197600684802547-0.437419278836636	chr4	117914618	117915433	+	0	NA	intron (NM_011213, intron 7 of 32)	intron (NM_011213, intron 7 of 32)	-31856	NR_106085	102466820		NR_106085		Mir7226	mmu-mir-7226	microRNA mir-7226	ncRNA
common_peak1-18132-16-23--0.466698858453094-0.497202060940027	chr8	10629221	10630028	+	0	NA	intron (NM_001081397, intron 35 of 35)	intron (NM_001081397, intron 35 of 35)	252830	NR_040705	320014	Mm.403203	NR_040705		B930025P03Rik	-	RIKEN cDNA B930025P03 gene	ncRNA
common_peak1-17251-60-30-1.40009555123366-5.75034450802421	chr6	130063070	130064904	+	0	NA	intron (NM_053151, intron 6 of 7)	intron (NM_053151, intron 6 of 7)	15866	NM_010650	16639	Mm.439698	NM_010650	ENSMUSG00000089727	Klra8	Cmv-1|Cmv1|Ly49h|Ly49u<129>	killer cell lectin-like receptor, subfamily A, member 8	protein-coding
common_peak1-8110-33-49--0.312518627249196-0.498996592876743	chr1	183344769	183346188	+	0	NA	intron (NM_028408, intron 3 of 5)	intron (NM_028408, intron 3 of 5)	62719	NM_001160211	72978	Mm.338083	NM_028408	ENSMUSG00000026514	Cnih3	2900075G08Rik|CNIH-3	cornichon homolog 3 (Drosophila)	protein-coding
common_peak2-25772-60-47-0.769329360899375-2.38916202615792	chr19	32345555	32347201	+	0	NA	intron (NM_001168525, intron 2 of 9)	intron (NM_001168525, intron 2 of 9)	-60875	NM_001168526	208449	Mm.329810	NM_144792	ENSMUSG00000040451	Sgms1	9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23	sphingomyelin synthase 1	protein-coding
unique_peak1-1075-12-8-0.478850983645327-0.562038191119709	chr11	86604022	86604654	+	0	NA	intron (NM_026191, intron 8 of 17)	intron (NM_026191, intron 8 of 17)	16824	NM_026191	67487	Mm.260627	NM_026191	ENSMUSG00000018425	Dhx40	2410016C14Rik|ARG147|DDX40|PAD	DEAH (Asp-Glu-Ala-His) box polypeptide 40	protein-coding
unique_peak1-4872-10-3-1.35641534500877-1.75805390616669	chr4	11767821	11768338	+	0	NA	Intergenic	Intergenic	82775	NM_019753	12557	Mm.33402	NM_019753	ENSMUSG00000028217	Cdh17	HPT-1|HPT-1/LI	cadherin 17	protein-coding
unique_peak2-35098-8-12--0.695217300193522-0.475924844171029	chr16	20799409	20800044	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-65142	NM_009379	21832	Mm.3943	NM_009379	ENSMUSG00000022847	Thpo	Mgdf|Ml|Mpllg|Tpo	thrombopoietin	protein-coding
common_peak2-30053-20-14-0.581184188982674-0.690311289528838	chr6	128224452	128225085	+	0	NA	intron (NM_001080979, intron 1 of 10)	intron (NM_001080979, intron 1 of 10)	26063	NM_001080979	21679	Mm.14774	NM_011567	ENSMUSG00000030353	Tead4	ETFR-2|Etfr2|FR-19|Rtef1|TEAD-4|TEF-3|Tcf13r1|Tef3|Tefr|Tefr1|Tefr1a	TEA domain family member 4	protein-coding
unique_peak2-36974-5-8--0.874305337448166-1.10484139239135	chr3	116129472	116129776	+	0	NA	Intergenic	Intergenic	-2674	NM_001173553	229776	Mm.17647	NM_001080818	ENSMUSG00000033502	Cdc14a	A830059A17Rik|CDC14A2|CDC14a1|Cdc14	CDC14 cell division cycle 14A	protein-coding
common_peak1-7645-43-28-0.924582190396131-2.24341076832583	chr1	72225601	72226626	+	0	NA	intron (NM_001005423, intron 2 of 4)	intron (NM_001005423, intron 2 of 4)	32768	NM_001005423	381269	Mm.422636	NM_001005423	ENSMUSG00000039395	Mreg	Gm974|Wdt2|dsu	melanoregulin	protein-coding
common_peak1-9295-63-92--0.100846220037441-0.331361767726665	chr11	88717528	88719296	+	0	NA	intron (NM_001042541, intron 1 of 10)	intron (NM_001042541, intron 1 of 10)	-5586	NR_104310	11640	Mm.2969	NM_009648	ENSMUSG00000018428	Akap1	AKAP121|AKAP84|Akap|C76494|C81186|DAKAP1|S-AKAP84	A kinase (PRKA) anchor protein 1	protein-coding
unique_peak1-2754-12-5-1.06381348436648-1.78669045979184	chr17	3557220	3557865	+	0	NA	promoter-TSS (NR_045303)	promoter-TSS (NR_045303)	171	NM_146074	224481	Mm.226554	NM_146074	ENSMUSG00000036983	Tfb1m	AI429207	transcription factor B1, mitochondrial	protein-coding
common_peak1-9164-18-30--0.641277159158523-0.738267116931589	chr11	78037830	78038638	+	0	NA	exon (NM_009297, exon 18 of 37)	exon (NM_009297, exon 18 of 37)	20971	NM_009297	20926	Mm.20755	NM_009297	ENSMUSG00000002052	Supt6	5131400N11Rik|AI132449|SPT6|Supt6h|mKIAA0162	suppressor of Ty 6	protein-coding
unique_peak1-7281-9-0-3.18961340640422-3.01029995663981	chr9	102944743	102945261	+	0	NA	intron (NM_033314, intron 1 of 13)	B4|SINE|B4	34183	NM_033314	24059	Mm.207106	NM_033314	ENSMUSG00000032548	Slco2a1	2310021C19Rik|Pgt|Slc21a2|mPgt	solute carrier organic anion transporter family, member 2a1	protein-coding
common_peak2-20217-89-150--0.203437984499076-0.580211473172483	chr1	179959160	179960672	+	0	NA	intron (NM_001034899, intron 5 of 7)	MLT1A0|LTR|MaLR	38350	NM_001034899	545391	Mm.442974	NM_001034899	ENSMUSG00000091476	Gm16432	EG545391|EG666250	predicted gene 16432	protein-coding
unique_peak1-3704-16-5-1.53330114154691-1.80287260729378	chr19	43962531	43963228	+	0	NA	intron (NM_028029, intron 4 of 15)	(TG)n|Simple_repeat|Simple_repeat	49586	NR_033472	100038628	Mm.212585	NR_033472	ENSMUSG00000074828	Gm10768	ENSMUSG00000074828	predicted gene 10768	ncRNA
common_peak2-27398-8-4-0.683294323060208-1.21878474469819	chr3	88210680	88211104	+	0	NA	intron (NM_025928, intron 1 of 4)	intron (NM_025928, intron 1 of 4)	3346	NM_025928	67037	Mm.36715	NM_025928	ENSMUSG00000028066	Pmf1	2600009M07Rik|AL033286|AW060657	polyamine-modulated factor 1	protein-coding
unique_peak1-1324-24-1-3.79320990276772-7.14178280843185	chr12	8075459	8076456	+	0	NA	Intergenic	Intergenic	91474	NM_009693	238055	Mm.221239	NM_009693	ENSMUSG00000020609	Apob	AI315052|Apo B-100|apob-100|apob-48	apolipoprotein B	protein-coding
common_peak1-10502-13-22--0.745089925419244-0.690311289528838	chr14	45318025	45318703	+	0	NA	Intergenic	Lx2|LINE|L1	26298	NM_001162954	666744	Mm.387002	NM_001162954	ENSMUSG00000091923	Gm8267	EG666744	predicted gene 8267	protein-coding
common_peak1-9441-10-22--1.16714661104824-1.30248952876293	chr11	102602807	102603526	+	0	NA	Intergenic	Intergenic	-19587	NM_009613	11488	Mm.89854	NM_009613	ENSMUSG00000020926	Adam11	AW060611|Mdc	a disintegrin and metallopeptidase domain 11	protein-coding
common_peak2-25888-24-23-0.208247402046561-0.407645899519042	chr19	44554617	44555624	+	0	NA	Intergenic	Intergenic	-12842	NM_011720	22423	Mm.88365	NM_011720	ENSMUSG00000036961	Wnt8b	-	wingless-type MMTV integration site family, member 8B	protein-coding
common_peak1-13506-35-33-0.343907417212165-0.587580258678924	chr2	85098222	85099573	+	0	NA	Intergenic	Lx8|LINE|L1	-62041	NM_001033346	241528	Mm.291095	NM_001033346	ENSMUSG00000075224	Lrrc55	A330097E02Rik|Gm351	leucine rich repeat containing 55	protein-coding
common_peak1-17015-24-12-1.09277018462662-1.73042999925837	chr6	91013887	91014854	+	0	NA	intron (NM_018815, intron 14 of 39)	PB1D10|SINE|Alu	52450	NM_018815	54563	Mm.28162	NM_018815	ENSMUSG00000030091	Nup210	9830001L10|AI836801|Pom210|gp190|gp210	nucleoporin 210	protein-coding
unique_peak1-883-8-1-2.00522241794757-2.05605744720049	chr11	32265851	32266364	+	0	NA	intron (NM_177364, intron 1 of 12)	intron (NM_177364, intron 1 of 12)	18296	NM_177364	268396	Mm.227616	NM_177364	ENSMUSG00000040711	Sh3pxd2b	G431001E03Rik|TSK4|fad49	SH3 and PX domains 2B	protein-coding
unique_peak2-37993-12-11-0.0638134843664826-0.337263207250336	chr6	22447378	22448082	+	0	NA	Intergenic	Intergenic	-141649	NM_138587	27999	Mm.490307	NM_138587	ENSMUSG00000029672	Fam3c	D6Wsu176e|Ilei	family with sequence similarity 3, member C	protein-coding
unique_peak1-1599-12-5-1.06381348436648-1.78669045979184	chr13	36728115	36728683	+	0	NA	Intergenic	HAL1-2a_MD|LINE|L1	97947	NM_153529	68404	Mm.232930	NM_153529	ENSMUSG00000039114	Nrn1	0710008J23Rik|Cpg15|Nrn	neuritin 1	protein-coding
common_peak1-9250-24-19-0.471281807880354-0.677583764578261	chr11	86647852	86648693	+	0	NA	Intergenic	ID_B1|SINE|B4	-27110	NM_026191	67487	Mm.260627	NM_026191	ENSMUSG00000018425	Dhx40	2410016C14Rik|ARG147|DDX40|PAD	DEAH (Asp-Glu-Ala-His) box polypeptide 40	protein-coding
unique_peak1-4422-16-3-2.11826364226806-2.65002542325363	chr2	167860320	167861269	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-24701	NM_001080708	69553	Mm.68454	NM_001080708	ENSMUSG00000074577	Fam65c	2310033K02Rik|Gm124	family with sequence similarity 65, member C	protein-coding
common_peak1-9310-14-4-1.57728806547028-2.4322161449009	chr11	94225348	94226167	+	0	NA	intron (NM_029600, intron 13 of 30)	intron (NM_029600, intron 13 of 30)	28533	NM_029600	76408	Mm.23942	NM_029600	ENSMUSG00000020865	Abcc3	1700019L09Rik|ABC31|MLP2|MOAT-D|MRP3	ATP-binding cassette, sub-family C (CFTR/MRP), member 3	protein-coding
unique_peak2-36280-4-11--1.6084230145744-1.68134727924692	chr2	64096989	64097499	+	0	NA	Intergenic	Intergenic	-161149	NM_001267847	60344	Mm.130769	NM_021716	ENSMUSG00000075324	Fign	fi|fidget	fidgetin	protein-coding
common_peak2-26642-27-43--0.467885667742062-0.652627812244285	chr2	119594181	119594869	+	0	NA	intron (NM_001163701, intron 21 of 24)	(TCTA)n|Simple_repeat|Simple_repeat	-8358	NM_206942	17005	Mm.1740	NM_008523	ENSMUSG00000027297	Ltk	-	leukocyte tyrosine kinase	protein-coding
common_peak1-18711-26-44--0.563954004171213-0.879657821688435	chr8	122575908	122577142	+	0	NA	3' UTR (NM_030209, exon 15 of 15)	3' UTR (NM_030209, exon 15 of 15)	48847	NM_133967	102193	Mm.240076	NM_133967	ENSMUSG00000031823	Zdhhc7	AL024087|Gramp2	zinc finger, DHHC domain containing 7	protein-coding
unique_peak2-35256-0-7--3.84013093047421-1.80617997398389	chr17	6651805	6652046	+	0	NA	intron (NM_001166627, intron 2 of 4).2	MTEb|LTR|MaLR	3031	NM_001166630	100040563	Mm.457381	NM_001166630		Dynlt1c	100040603|Dynlt1d	dynein light chain Tctex-type 1C	protein-coding
common_peak2-24834-19-22--0.120874629395327-0.306080386793804	chr17	72959794	72960627	+	0	NA	Intergenic	B4A|SINE|B4	-6563	NM_007439	11682	Mm.311854	NM_007439	ENSMUSG00000055471	Alk	CD246|Tcrz	anaplastic lymphoma kinase	protein-coding
unique_peak2-35009-2-6--1.72480917832092-1.26211192963361	chr15	100980253	100980546	+	0	NA	Intergenic	Intergenic	21446	NM_001277257	11482	Mm.279542	NM_009612	ENSMUSG00000000530	Acvrl1	AI115505|AI427544|Acvrlk1|Alk1	activin A receptor, type II-like 1	protein-coding
common_peak2-22737-12-10-0.189344366450341-0.386243247519795	chr13	109318885	109319444	+	0	NA	Intergenic	Intergenic	-125207	NM_011056	238871	Mm.434429	NM_011056		Pde4d	9630011N22Rik|Dpde3	phosphodiesterase 4D, cAMP specific	protein-coding
unique_peak2-33915-8-19--1.31670567693979-1.30305656033811	chr12	69197031	69197782	+	0	NA	Intergenic	Lx|LINE|L1	-427148	NR_033146	100316870	Mm.379794	NR_033146		Gm17821	-	DDB1 and CUL4 associated factor 5 pseudogene	pseudo
unique_peak2-32952-5-8--0.874305337448166-1.10484139239135	chr10	41489945	41490378	+	0	NA	intron (NM_001243074, intron 2 of 10)	intron (NM_001243074, intron 2 of 10)	39308	NM_001243075	103268	Mm.338605	NM_026643	ENSMUSG00000019813	Cep57l1	2410017P07Rik|4930484D11Rik|AI607327|cep57R	centrosomal protein 57-like 1	protein-coding
common_peak2-19916-22-37--0.600643408356181-0.808568985218824	chr1	125559915	125561021	+	0	NA	intron (NM_199021, intron 4 of 25)	B4A|SINE|B4	381668	NM_199021	269109	Mm.483255	NM_199021	ENSMUSG00000036815	Dpp10	6430601K09Rik|DPP X|Dprp3	dipeptidylpeptidase 10	protein-coding
common_peak1-14863-21-18-0.32156175182265-0.48779450977742	chr3	95281084	95281792	+	0	NA	intron (NM_001037737, intron 8 of 21)	B3A|SINE|B2	-21694	NM_007802	13038	Mm.272085	NM_007802	ENSMUSG00000028111	Ctsk	AI323530|MMS10-Q|Ms10q|catK	cathepsin K	protein-coding
unique_peak2-33693-11-19--0.813234510635749-0.769930178837768	chr11	105943788	105944631	+	0	NA	Intergenic	Intergenic	-2007	NM_011947	26406	Mm.27041	NM_011947	ENSMUSG00000020700	Map3k3	AW548911|MAPKKK3|Mekk3|mKIAA4031	mitogen-activated protein kinase kinase kinase 3	protein-coding
common_peak1-14764-17-19--0.103631756682325-0.301029995663974	chr3	88409647	88410375	+	0	NA	Intergenic	Intergenic	-10118	NM_001198911	16800	Mm.239329	NM_008487	ENSMUSG00000028059	Arhgef2	AA408978|GEF|GEF-H1|GEFH1|LFP40|Lbcl1|Lfc|P40|mKIAA0651	rho/rac guanine nucleotide exchange factor (GEF) 2	protein-coding
unique_peak1-3197-15-10-0.552733131918359-0.604422558181019	chr18	54905234	54905935	+	0	NA	Intergenic	(TA)n|Simple_repeat|Simple_repeat	134186	NR_045400	328957	Mm.402781	NR_045400		9330117O12Rik	9330117O12	RIKEN cDNA 9330117O12 gene	ncRNA
common_peak2-31212-23-12-1.02132778636799-1.44787515926925	chr8	65046389	65046962	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-383354	NM_001252620	72902	Mm.334552	NM_023689	ENSMUSG00000054162	Spock3	2900045C01Rik|AI428471|mKIAA4039	sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	protein-coding
unique_peak1-735-7-5-0.214128329577033-1.01466476204226	chr10	99108095	99108604	+	0	NA	intron (NR_038019, intron 1 of 2)	B3|SINE|B2	-3795	NR_038018	100417125	Mm.391428	NR_038018		Gm18409	-	mediator of cell motility 1 pseudogene	pseudo
common_peak1-19184-7-3-0.799090830298189-1.23214870625617	chr9	99132797	99133286	+	0	NA	intron (NM_001244762, intron 3 of 4)	B3|SINE|B2	4617	NM_001244762	623459	Mm.260891	NM_001244762	ENSMUSG00000096316	Gm6432	EG623459	predicted gene 6432	protein-coding
common_peak2-31013-36-80--0.86052891671687-2.45778990690048	chr8	11311897	11314040	+	0	NA	promoter-TSS (NM_009931)	promoter-TSS (NM_009931)	139	NM_009932	12827	Mm.181021	NM_009932	ENSMUSG00000031503	Col4a2	Col4a-2	collagen, type IV, alpha 2	protein-coding
common_peak2-24381-14-14--0.00767443525087419-0.308519316180257	chr17	12119258	12119915	+	0	NA	intron (NM_016694, intron 9 of 11)	B4|SINE|B4	-43531	NR_045808	52027	Mm.442257	NR_045808		D17Ertd648e	-	DNA segment, Chr 17, ERATO Doi 648, expressed	ncRNA
common_peak1-14560-19-12-0.702247608520594-0.840839978588874	chr3	36476149	36476934	+	0	NA	intron (NM_027810, intron 15 of 18)	L1_Mur3|LINE|L1	-5623	NM_009828	12428	Mm.4189	NM_009828	ENSMUSG00000027715	Ccna2	AA408589|Ccn-1|Ccn1|Ccna|CycA2|Cyca	cyclin A2	protein-coding
unique_peak2-35016-7-5-0.214128329577033-1.01466476204226	chr15	102012274	102012696	+	0	NA	intron (NM_144942, intron 8 of 14)	intron (NM_144942, intron 8 of 14)	6989	NM_144942	246277	Mm.296382	NM_144942	ENSMUSG00000023044	Csad	Csd	cysteine sulfinic acid decarboxylase	protein-coding
common_peak2-22351-71-82-0.269404747373047-0.688232488689754	chr13	24565504	24567000	+	0	NA	3' UTR (NM_001111110, exon 17 of 17)	3' UTR (NM_001111110, exon 17 of 17)	59261	NM_001284520	12763	Mm.8396	NM_007717	ENSMUSG00000016756	Cmah	-	cytidine monophospho-N-acetylneuraminic acid hydroxylase	protein-coding
common_peak1-15251-15-35--1.15776025088666-1.87578206828671	chr4	12089451	12090054	+	0	NA	intron (NM_026558, intron 5 of 7)	Lx5|LINE|L1	9410	NM_026558	68099	Mm.25340	NM_026558	ENSMUSG00000028218	Fam92a	6720467C03Rik|Fam92a1	family with sequence similarity 92, member A	protein-coding
common_peak2-22017-72-68-0.560059356094149-1.78763620797383	chr12	57535277	57537016	+	0	NA	Intergenic	MTE2a|LTR|MaLR	-89265	NM_145442	217588	Mm.25656	NM_145442	ENSMUSG00000021028	Mbip	4933408E06Rik	MAP3K12 binding inhibitory protein 1	protein-coding
common_peak2-29448-13-40--1.57907997398032-3.13557888369248	chr6	18845066	18846311	+	0	NA	Intergenic	Intergenic	29370	NM_001167757	75196	Mm.67665	NM_029202	ENSMUSG00000029517	Ankrd7	4930532L20Rik|AV278427	ankyrin repeat domain 7	protein-coding
unique_peak1-5537-16-2-2.53330114154691-3.78760380288747	chr5	140381815	140382698	+	0	NA	Intergenic	GA-rich|Low_complexity|Low_complexity	-1641	NM_175522	243312	Mm.237102	NM_175522	ENSMUSG00000048988	Elfn1	A930017N06Rik|AI197272|Ppp1r28	leucine rich repeat and fibronectin type III, extracellular 1	protein-coding
common_peak1-9845-14-20--0.493101262421116-0.456667090758524	chr12	79006688	79007521	+	0	NA	Intergenic	Intergenic	-320538	NM_172952	268566	Mm.341742	NM_145965	ENSMUSG00000047454	Gphn	5730552E08Rik|AI662856|BC027112|C230040D23|GPH|GPHRYN|geph	gephyrin	protein-coding
common_peak1-16562-78-159--0.515107000726828-2.08004229965105	chr5	145230895	145232612	+	0	NA	Intergenic	(GAA)n|Simple_repeat|Simple_repeat	-75003	NM_016789	53324	Mm.10099	NM_016789	ENSMUSG00000059991	Nptx2	Narp|np2	neuronal pentraxin 2	protein-coding
common_peak2-19629-36-50--0.193104255803741-0.358200417993044	chr1	38129022	38130070	+	0	NA	intron (NM_019570, intron 10 of 22)	intron (NM_019570, intron 10 of 22)	56961	NM_019570	56210	Mm.389103	NM_019570	ENSMUSG00000026082	Rev1	1110027I23Rik|AU022044|Rev1l	REV1 homolog (S. cerevisiae)	protein-coding
unique_peak2-38320-3-7--1.41398308995928-1.23214870625617	chr6	146674570	146675006	+	0	NA	intron (NM_172734, intron 1 of 13)	intron (NM_172734, intron 1 of 13)	1336	NM_172734	232533	Mm.322121	NM_172734	ENSMUSG00000001630	Stk38l	4930473A22Rik|B230328I19|Ndr2|Ndr54	serine/threonine kinase 38 like	protein-coding
common_peak2-29764-8-4-0.683294323060208-1.21878474469819	chr6	87102071	87102367	+	0	NA	intron (NM_054041, intron 17 of 17)	intron (NM_054041, intron 17 of 17)	47479	NM_001167937	52372	Mm.282851	NM_001167937		D6Ertd527e	AU043841	DNA segment, Chr 6, ERATO Doi 527, expressed	protein-coding
common_peak1-19423-22-38--0.638118113774844-0.887741995158868	chrX	74424409	74425227	+	0	NA	Intergenic	L1Md_A|LINE|L1	-331748	NM_020601	21372	Mm.258476	NM_020601	ENSMUSG00000025246	Tbl1x	5330429M20|Tbl1	transducin (beta)-like 1 X-linked	protein-coding
common_peak1-17157-25-19-0.539921810457743-0.756750750680359	chr6	118561782	118562837	+	0	NA	intron (NM_001159533, intron 37 of 46)	intron (NM_001159533, intron 37 of 46)	-50035	NM_001081112	232339	Mm.276116	NM_001081112	ENSMUSG00000007827	Ankrd26	5730521P14Rik|BC008111|mKIAA1074	ankyrin repeat domain 26	protein-coding
common_peak2-32067-12-9-0.326847890200276-0.459837087125828	chr9	92275713	92276223	+	0	NA	Intergenic	Lx7|LINE|L1	71753	NM_001033184	78459	Mm.179195	NM_001033184	ENSMUSG00000074139	1700057G04Rik	-	RIKEN cDNA 1700057G04 gene	protein-coding
unique_peak2-38865-5-5--0.289342836727009-0.909929411522249	chr7	145109065	145109464	+	0	NA	Intergenic	Intergenic	479907	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
unique_peak2-38213-1-6--2.43441193227435-1.56314192529759	chr6	114771475	114771845	+	0	NA	intron (NM_001253718, intron 19 of 19)	intron (NM_001253718, intron 19 of 19)	100110	NM_177683	232334	Mm.268357	NM_177683		Vgll4	BC048841|VGL-4	vestigial like 4 (Drosophila)	protein-coding
common_peak1-12162-18-31--0.687080848771648-0.820293215674341	chr17	29268873	29269658	+	0	NA	Intergenic	Intergenic	-2736	NM_001002786	442827	Mm.440341	NM_001002786	ENSMUSG00000064147	Rab44	9830134C10Rik	RAB44, member RAS oncogene family	protein-coding
unique_peak2-33525-5-8--0.874305337448166-1.10484139239135	chr11	76243809	76244211	+	0	NA	intron (NM_198894, intron 16 of 22)	intron (NM_198894, intron 16 of 22)	23365	NM_019818	56322	Mm.18803	NM_019818	ENSMUSG00000020843	Timm22	Tim22	translocase of inner mitochondrial membrane 22	protein-coding
common_peak1-13351-23-21-0.262335885871783-0.416752705545949	chr19	44554283	44555343	+	0	NA	Intergenic	L1M3|LINE|L1	-13149	NM_011720	22423	Mm.88365	NM_011720	ENSMUSG00000036961	Wnt8b	-	wingless-type MMTV integration site family, member 8B	protein-coding
common_peak2-25025-34-33-0.294605685750927-0.53611512876719	chr18	24470499	24471450	+	0	NA	Intergenic	RMER12|LTR|ERVK	106479	NM_001160404	14423	Mm.30249	NM_013814	ENSMUSG00000000420	Galnt1	-	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1	protein-coding
unique_peak1-477-11-4-1.18676548936425-1.68134727924692	chr1	177338597	177339328	+	0	NA	intron (NM_001199003, intron 2 of 17)	intron (NM_001199003, intron 2 of 17)	83714	NM_011880	24012	Mm.7956	NM_011880		Rgs7	-	regulator of G protein signaling 7	protein-coding
common_peak2-27872-54-73--0.0363676039992162-0.302527574714518	chr4	136052562	136053507	+	0	NA	intron (NM_024452, intron 1 of 4)	B1F2|SINE|Alu	27358	NM_024452	269593	Mm.485824	NM_024452	ENSMUSG00000001089	Luzp1	2700072H04Rik|AI266952|Luzp|mFLJ00226	leucine zipper protein 1	protein-coding
common_peak1-11551-23-30--0.232428805877794-0.363124929330844	chr16	10313128	10314087	+	0	NA	intron (NM_007929, intron 1 of 4)	intron (NM_007929, intron 1 of 4)	454	NM_007929	13731	Mm.246009	NM_007929	ENSMUSG00000022505	Emp2	XMP	epithelial membrane protein 2	protein-coding
unique_peak2-37709-4-9--1.34538860874061-1.36011389749466	chr5	104022490	104022904	+	0	NA	exon (NM_011204, exon 46 of 48)	exon (NM_011204, exon 46 of 48)	35725	NM_029415	75750	Mm.7446	NM_029415	ENSMUSG00000029321	Slc10a6	8430417G17Rik|C78479|Soat	solute carrier family 10 (sodium/bile acid cotransporter family), member 6	protein-coding
common_peak2-29307-9-11--0.395349094316936-0.344532117358383	chr5	145201072	145201587	+	0	NA	Intergenic	PB1D10|SINE|Alu	81935	NR_102373	100579137		NR_102372		Dmr	-	Dmrt1 related	ncRNA
common_peak1-10012-8-6-0.197867495889966-1.03789460276074	chr13	6010163	6010609	+	0	NA	Intergenic	Intergenic	149651	NM_011803	23849	Mm.275036	NM_011803	ENSMUSG00000000078	Klf6	AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9	Kruppel-like factor 6	protein-coding
unique_peak2-34093-2-5--1.50241675698448-1.08602067057793	chr13	12650549	12651051	+	0	NA	Intergenic	B3|SINE|B2	-7350	NM_026184	67475	Mm.358706	NM_026184	ENSMUSG00000057069	Ero1lb	1300013B24Rik|1700065B09Rik|AI447560|ero1-beta	ERO1-like beta (S. cerevisiae)	protein-coding
common_peak2-20810-18-15-0.312919151228352-0.456667090758524	chr10	127311167	127311828	+	0	NA	intron (NM_145424, intron 1 of 3)	RLTR47_MM|LTR|ERV1	7965	NM_145424	216454	Mm.214923	NM_145424	ENSMUSG00000074639	BC089597	CRAD-L	cDNA sequence BC089597	protein-coding
common_peak1-16322-36-36-0.269867720538804-0.51862626278861	chr5	115564762	115566066	+	0	NA	intron (NM_007383, intron 2 of 9)	B1_Mus2|SINE|Alu	3941	NM_007383	11409	Mm.18759	NM_007383	ENSMUSG00000029545	Acads	AI196007|Bcd-1|Bcd1|Hdlq8|SCAD	acyl-Coenzyme A dehydrogenase, short chain	protein-coding
common_peak2-21419-17-7-1.21829633820504-1.55050753388977	chr11	84168633	84169031	+	0	NA	intron (NM_133360, intron 43 of 53)	intron (NM_133360, intron 43 of 53)	158171	NM_019816	56321	Mm.257482	NM_019816	ENSMUSG00000018697	Aatf	4933415H02Rik|5830465M17Rik|Che-1|Trb	apoptosis antagonizing transcription factor	protein-coding
common_peak1-11852-44-32-0.777498715210082-1.84665509793009	chr16	90884632	90886022	+	0	NA	intron (NM_027627, intron 4 of 6)	MLT1F|LTR|MaLR	49767	NM_026502	68001	Mm.45374	NM_026502	ENSMUSG00000022972	1110004E09Rik	-	RIKEN cDNA 1110004E09 gene	protein-coding
common_peak1-9237-24-11-1.20824740204656-1.9654245668484	chr11	86256841	86257585	+	0	NA	Intergenic	Intergenic	-40946	NM_029788	76892	Mm.262707	NM_029788	ENSMUSG00000020521	Rnft1	0610013E23Rik|AV007605	ring finger protein, transmembrane 1	protein-coding
unique_peak2-35335-4-8--1.19338551529556-1.21878474469819	chr17	23829584	23829974	+	0	NA	Intergenic	B1_Mur3|SINE|Alu	-8786	NM_020293	56863	Mm.491368	NM_020293	ENSMUSG00000066720	Cldn9	nmf329	claudin 9	protein-coding
common_peak2-24756-5-4--0.0263084308932156-0.909929411522249	chr17	55958534	55958960	+	0	NA	intron (NM_139138, intron 14 of 16)	MTE2b|LTR|MaLR	59471	NM_144546	104349	Mm.460659	NM_144546		Zfp119a	AL024077|Mzf13|Zfp119	zinc finger protein 119a	protein-coding
common_peak2-29860-28-37--0.194968393622123-0.350690697593776	chr6	100287587	100288442	+	0	NA	Intergenic	Intergenic	-50662	NM_019743	56353	Mm.321633	NM_019743	ENSMUSG00000072872	Rybp	2410018J24Rik|DEDAF|YEAF1	RING1 and YY1 binding protein	protein-coding
common_peak1-13232-16-22--0.405298313788951-0.440610794044987	chr19	28963801	28964556	+	0	NA	intron (NM_009199, intron 2 of 11)	intron (NM_009199, intron 2 of 11)	54522	NM_009199	20510	Mm.246670	NM_009199	ENSMUSG00000024935	Slc1a1	D130048G10Rik|EAAC1|EAAC2|EAAT3|MEAAC1	solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	protein-coding
common_peak2-20029-26-24-0.284042902383738-0.446094173747083	chr1	136229955	136231126	+	0	NA	Intergenic	Intergenic	-1035	NM_001144855	68507	Mm.295105	NM_001144855	ENSMUSG00000026458	Ppfia4	1110008G13Rik|AI448359|AI852265|C81506	protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4	protein-coding
common_peak2-26923-12-14--0.25811461052088-0.309074325783021	chr2	163515610	163516284	+	0	NA	intron (NM_001039390, intron 2 of 4)	intron (NM_001039390, intron 2 of 4)	-3826	NM_011106	18769	Mm.10091	NM_011106	ENSMUSG00000035268	Pkig	PKIgamma	protein kinase inhibitor, gamma	protein-coding
unique_peak1-127-8-4-0.683294323060208-1.21878474469819	chr1	64337497	64337958	+	0	NA	Intergenic	Intergenic	-169764	NM_033563	93691	Mm.29466	NM_033563	ENSMUSG00000025959	Klf7	9830124P08Rik	Kruppel-like factor 7 (ubiquitous)	protein-coding
common_peak2-31678-19-24--0.241168863113038-0.344491671143527	chr8	126849130	126850003	+	0	NA	intron (NM_139272, intron 6 of 15)	intron (NM_139272, intron 6 of 15)	94272	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
unique_peak2-36694-6-14--1.34149248522822-1.01572999746118	chr3	36284102	36284882	+	0	NA	Intergenic	Intergenic	89954	NR_105976	102466786		NR_105976	miRBase:MI0022858	Mir7009	mmu-mir-7009	microRNA mir-7009	ncRNA
common_peak2-31207-12-11-0.0638134843664826-0.337263207250336	chr8	61927856	61928438	+	0	NA	Intergenic	Intergenic	537595	NM_173411	234290	Mm.39244	NM_173411	ENSMUSG00000049946	BC030500	-	cDNA sequence BC030500	protein-coding
common_peak1-11393-19-16-0.315224485411347-0.448200956659575	chr15	97963552	97964716	+	0	NA	TTS (NM_001170711)	TTS (NM_001170711)	11999	NM_030121	78541	Mm.200766	NM_030121	ENSMUSG00000048175	Asb8	4930539L19Rik|AI788835|C430011H06Rik	ankyrin repeat and SOCS box-containing 8	protein-coding
common_peak2-31545-16-14-0.211373046659543-0.364171515310935	chr8	111629862	111630497	+	0	NA	Intergenic	Intergenic	169419	NR_037295	100526511		NR_037295		Mir3108	mmu-mir-3108	microRNA 3108	ncRNA
common_peak1-12165-9-11--0.395349094316936-0.344532117358383	chr17	29439420	29439991	+	0	NA	3' UTR (NM_030561, exon 9 of 9)	3' UTR (NM_030561, exon 9 of 9)	-16122	NM_023734	74116	Mm.30950	NM_023734	ENSMUSG00000024011	Pi16	1200009H11Rik|Cripi|PI-16	peptidase inhibitor 16	protein-coding
common_peak1-17120-26-72--1.26192546672156-4.17044941831569	chr6	115360613	115361497	+	0	NA	intron (NM_001127330, intron 2 of 7)	intron (NM_001127330, intron 2 of 7)	-11029	NM_011146	19016	Mm.3020	NM_011146	ENSMUSG00000000440	Pparg	Nr1c3|PPAR-gamma|PPAR-gamma2|PPARgamma|PPARgamma2	peroxisome proliferator activated receptor gamma	protein-coding
common_peak2-20370-6-10--0.894033508256995-1.21398586181642	chr10	13965820	13966376	+	0	NA	Intergenic	L1Md_F2|LINE|L1	279913	NM_010437	15273	Mm.42157	NM_010437	ENSMUSG00000015501	Hivep2	MIBP1|Schnurri-2|Shn-2	human immunodeficiency virus type I enhancer binding protein 2	protein-coding
unique_peak2-39458-3-9--1.73591118484664-1.57096726280955	chr9	53341206	53341453	+	0	NA	intron (NM_007499, intron 3 of 63)	B2_Mm2|SINE|B2	3447	NM_007499	11920	Mm.5088	NM_007499	ENSMUSG00000034218	Atm	AI256621|C030026E19Rik	ataxia telangiectasia mutated	protein-coding
unique_peak2-36303-1-5--2.2120195109379-1.32905871926422	chr2	73313195	73313476	+	0	NA	intron (NM_153138, intron 1 of 7)	intron (NM_153138, intron 1 of 7)	10475	NM_001289723	215280	Mm.223504	NM_153138	ENSMUSG00000075284	Wipf1	AI115543|D2Ertd120e|WIP|Waspip	WAS/WASL interacting protein family, member 1	protein-coding
common_peak1-16312-11-8-0.338768582809301-1.14218153353838	chr5	114813577	114814034	+	0	NA	3' UTR (NM_001164573, exon 31 of 31)	3' UTR (NM_001164573, exon 31 of 31)	16709	NM_026145	330171	Mm.238285	NM_026145	ENSMUSG00000001098	Kctd10	AW536343|C87062|mBACURD3	potassium channel tetramerisation domain containing 10	protein-coding
common_peak1-12105-27-7-1.99154595089524-4.07016573886257	chr17	26094825	26095646	+	0	NA	Intergenic	Intergenic	7215	NM_015830	50817	Mm.216072	NM_015830	ENSMUSG00000037326	Capn15	Solh	calpain 15	protein-coding
common_peak2-24706-57-90--0.241761600119768-0.52100027772274	chr17	46030137	46031999	+	0	NA	Intergenic	Intergenic	131044	NM_001110267	22339	Mm.282184	NM_009505	ENSMUSG00000023951	Vegfa	Vegf|Vpf	vascular endothelial growth factor A	protein-coding
common_peak1-17466-17-39--1.10363175668232-1.82978420966174	chr7	19628991	19629700	+	0	NA	intron (NM_026605, intron 13 of 26)	intron (NM_026605, intron 13 of 26)	-10691	NM_031255	83434	Mm.84435	NM_031255	ENSMUSG00000040866	Rsph6a	RSP4|Rshl1	radial spoke head 6 homolog A (Chlamydomonas)	protein-coding
common_peak1-9059-18-11-0.727956650507195-0.876666802405043	chr11	68871581	68872358	+	0	NA	Intergenic	Intergenic	-1308	NM_028005	71923	Mm.340257	NM_028005	ENSMUSG00000045176	2310047M10Rik	-	RIKEN cDNA 2310047M10 gene	protein-coding
unique_peak2-35873-4-9--1.34538860874061-1.36011389749466	chr18	79900107	79900607	+	0	NA	Intergenic	Lx2B|LINE|L1	-343277	NM_053117	93737	Mm.24678	NM_053117	ENSMUSG00000056214	Pard6g	2410049N21Rik|Par6a	par-6 family cell polarity regulator gamma	protein-coding
common_peak1-18339-17-35--0.951628663237274-1.34608670144205	chr8	64947210	64947968	+	0	NA	Intergenic	Intergenic	-345599	NM_011922	26359	Mm.42179	NM_011922	ENSMUSG00000031635	Anxa10	-	annexin A10	protein-coding
common_peak1-17158-14-9-0.577288065470282-0.630231561310125	chr6	119175122	119175825	+	0	NA	Intergenic	Intergenic	-11071	NM_001033382	319734	Mm.440773	NM_001033382	ENSMUSG00000041460	Cacna2d4	5730412N02Rik|BE686333	calcium channel, voltage-dependent, alpha 2/delta subunit 4	protein-coding
common_peak2-26522-7-5-0.214128329577033-1.01466476204226	chr2	91112372	91112733	+	0	NA	intron (NM_001166024, intron 11 of 16)	B1F1|SINE|Alu	7280	NM_023854	77038	Mm.43636	NM_023854	ENSMUSG00000027255	Arfgap2	2310032E02Rik|Zfp289	ADP-ribosylation factor GTPase activating protein 2	protein-coding
common_peak1-9883-13-11-0.193509529916613-0.379391706698377	chr12	84772178	84772835	+	0	NA	intron (NM_001267625, intron 1 of 10)	intron (NM_001267625, intron 1 of 10)	56180	NM_001267626	70127	Mm.151308	NM_058212	ENSMUSG00000021221	Dpf3	2810403B03Rik|6530402L11Rik|BAF45C|C78788|CERD4|cer-d4	D4, zinc and double PHD fingers, family 3	protein-coding
unique_peak2-35890-3-6--1.22133801201688-1.08602067057793	chr19	36290407	36290788	+	0	NA	Intergenic	ORR1B2|LTR|MaLR	-96263	NM_013468	107765	Mm.10279	NM_013468	ENSMUSG00000024803	Ankrd1	Alrp|CARP|Crap|MARP1	ankyrin repeat domain 1 (cardiac muscle)	protein-coding
common_peak2-19901-13-10-0.319040412000471-0.446472590016315	chr1	107590073	107590628	+	0	NA	intron (NM_029349, intron 7 of 27)	intron (NM_029349, intron 7 of 27)	29912	NM_173187	227446	Mm.337339	NM_029349	ENSMUSG00000026319	2310035C23Rik	6430401N10|Kiaa1468|mKIAA1468	RIKEN cDNA 2310035C23 gene	protein-coding
common_peak1-11766-42-21-1.28289770922989-3.56455313593768	chr16	42906938	42908075	+	0	NA	promoter-TSS (NM_001285805)	promoter-TSS (NM_001285805)	-252	NM_001285805	56490	Mm.136238	NM_019778	ENSMUSG00000022708	Zbtb20	1300017A20Rik|7330412A13Rik|A930017C21Rik|D16Wsu73e|DPZF|HOF|ODA-8S|Oda8|Zfp288	zinc finger and BTB domain containing 20	protein-coding
common_peak1-17211-60-58-0.47164881225869-1.19886391578317	chr6	125348837	125350863	+	0	NA	Intergenic	MTD|LTR|MaLR	-19328	NM_198604	213522	Mm.333396	NM_198604	ENSMUSG00000038167	Plekhg6	BC026778|Gm155	pleckstrin homology domain containing, family G (with RhoGef domain) member 6	protein-coding
unique_peak1-3377-26-11-1.34293659143731-2.2880788707084	chr19	3684340	3685604	+	0	NA	intron (NM_008513, intron 1 of 22)	intron (NM_008513, intron 1 of 22)	1592	NM_008513	16973	Mm.274581	NM_008513	ENSMUSG00000024913	Lrp5	BMND1|HBM|LR3|LRP7|OPPG|mKIAA4142	low density lipoprotein receptor-related protein 5	protein-coding
unique_peak2-34202-7-5-0.214128329577033-1.01466476204226	chr13	41331104	41331488	+	0	NA	Intergenic	MIRb|SINE|MIR	-13917	NM_001135577	108934	Mm.38578	NM_001135577	ENSMUSG00000091264	Smim13	2900036K02Rik	small integral membrane protein 13	protein-coding
unique_peak1-2081-11-6-0.701338662194009-1.32595962126035	chr15	36875659	36876105	+	0	NA	Intergenic	Intergenic	61275	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
common_peak1-7772-14-12-0.198776442216552-0.373562084705529	chr1	93289422	93290288	+	0	NA	intron (NM_023343, intron 1 of 11)	B4A|SINE|B4	5505	NM_023343	67444	Mm.337240	NM_023343	ENSMUSG00000026309	Ilkap	0710007A14Rik|1600009O09Rik|PP2C-DELTA	integrin-linked kinase-associated serine/threonine phosphatase 2C	protein-coding
common_peak1-16961-19-29--0.504203268946832-0.580176690544129	chr6	85915495	85916403	+	0	NA	Intergenic	LTRIS2|LTR|ERV1	-4288	NM_028099	72102	Mm.24007	NM_028099	ENSMUSG00000030002	Dusp11	2010300F21Rik|AI481497	dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	protein-coding
common_peak2-20126-11-15--0.491306415748387-0.435191258261915	chr1	165432612	165433065	+	0	NA	Intergenic	B3A|SINE|B2	-99066	NM_178883	98376	Mm.32901	NM_178883	ENSMUSG00000040124	Gorab	AI467484|NTKL-BP1|Scyl1bp1	golgin, RAB6-interacting	protein-coding
common_peak1-14436-13-22--0.745089925419244-0.690311289528838	chr2	181241467	181242059	+	0	NA	intron (NR_111899, intron 3 of 5)	intron (NR_111899, intron 3 of 5)	9916	NM_001291204	66314	Mm.136648	NM_025482		Tpd52l2	2810411G23Rik|AU016537|C86069|D54	tumor protein D52-like 2	protein-coding
unique_peak1-4152-7-2-1.21412832957703-1.45399745587252	chr2	100312711	100313226	+	0	NA	Intergenic	RLTR20B3|LTR|ERVK	-1151937	NM_009020	19374	Mm.4988	NM_009020	ENSMUSG00000032864	Rag2	Rag-2	recombination activating gene 2	protein-coding
common_peak2-27736-13-8-0.608547029195456-0.660903317613904	chr3	126561395	126561869	+	0	NA	Intergenic	L1_Mur3|LINE|L1	84672	NM_001034168	109676	Mm.220242	NM_178655	ENSMUSG00000032826	Ank2	AI835472|AW491075|Ank-2	ankyrin 2, brain	protein-coding
common_peak1-16394-20-37--0.759852728852392-1.13829382151971	chr5	124249005	124249856	+	0	NA	intron (NM_001042421, intron 44 of 63)	intron (NM_001042421, intron 44 of 63)	49695	NM_001042421	208628	Mm.441089	NM_001042421	ENSMUSG00000029414	Kntc1	D330012D13	kinetochore associated 1	protein-coding
unique_peak1-4674-10-3-1.35641534500877-1.75805390616669	chr3	94633395	94633865	+	0	NA	Intergenic	Intergenic	-7859	NM_001165948	229584	Mm.274787	NM_172683	ENSMUSG00000038902	Pogz	9530006B08Rik	pogo transposable element with ZNF domain	protein-coding
common_peak2-22476-18-19--0.00900894365901106-0.306598483909153	chr13	48625102	48625742	+	0	NA	Intergenic	PB1D10|SINE|Alu	6061	NR_029656	387247		NR_029656	miRBase:MI0000405	Mirlet7d	Mirnlet7d|mmu-let-7d	microRNA let7d	ncRNA
unique_peak1-4752-6-0-2.5653981103803-2.10720996964787	chr3	116196343	116196715	+	0	NA	intron (NM_025517, intron 9 of 10)	intron (NM_025517, intron 9 of 10)	14564	NM_025517	66368	Mm.251228	NM_025517	ENSMUSG00000000339	Rtca	2310009A18Rik|AI450277|RPC|Rtcd1	RNA 3'-terminal phosphate cyclase	protein-coding
common_peak1-8037-10-6-0.549060422951165-1.21398586181642	chr1	171247983	171248439	+	0	NA	Intergenic	Intergenic	213384	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
common_peak1-10682-22-18-0.399356591643819-0.549581527953406	chr14	54573181	54574062	+	0	NA	Intergenic	Intergenic	288006	NM_001205242	100568452	Mm.213248	NM_001205242		A430107P09Rik	Va10	RIKEN cDNA A430107P09 gene	protein-coding
common_peak1-8763-16-11-0.533301141546906-0.58239619684445	chr11	5837181	5837921	+	0	NA	intron (NM_010292, intron 1 of 9)	RLTR10-int|LTR|ERVK	12533	NM_010292	103988	Mm.220358	NM_010292	ENSMUSG00000041798	Gck	GLK|Gk|Gls006|HK4|HKIV|HXKP|MODY2	glucokinase	protein-coding
unique_peak1-862-10-0-3.35641534500877-3.31132995230379	chr11	21581806	21582338	+	0	NA	intron (NM_145425, intron 6 of 17)	intron (NM_145425, intron 6 of 17)	109788	NM_145425	216560	Mm.138090	NM_145425	ENSMUSG00000020319	Wdpcp	AV249152	WD repeat containing planar cell polarity effector	protein-coding
common_peak1-15259-89-120-0.116103517551408-0.405744072202717	chr4	21847541	21848610	+	0	NA	Intergenic	Intergenic	-10398	NM_175234	76132	Mm.159689	NM_175234		Faxc	6230409E13Rik|AW742931	failed axon connections homolog (Drosophila)	protein-coding
unique_peak1-337-10-1-2.35641534500877-2.57096726280955	chr1	134072783	134073161	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-15041	NM_001033250	213409	Mm.426321	NM_001033250	ENSMUSG00000079330	Lemd1	4930540I23Rik|6430514M23Rik|AI428128|LEMP-1	LEM domain containing 1	protein-coding
common_peak2-29691-21-15-0.569489265266236-0.756118839439552	chr6	73221682	73222548	+	0	NA	intron (NM_019879, intron 7 of 8)	B3|SINE|B2	23616	NM_019879	56451	Mm.29845	NM_019879	ENSMUSG00000052738	Suclg1	1500000I01Rik|Sucla1	succinate-CoA ligase, GDP-forming, alpha subunit	protein-coding
common_peak2-22069-16-28--0.73971735285951-0.890873221665474	chr12	75734999	75735768	+	0	NA	Intergenic	L1M4|LINE|L1	336922	NM_198866	386753	Mm.341686	NM_198866	ENSMUSG00000029878	Dbpht2	Spot2	DNA binding protein with his-thr domain	protein-coding
common_peak2-19698-18-18-0.0649916377847664-0.323898164595606	chr1	60409216	60410329	+	0	NA	exon (NM_030013, exon 3 of 13)	exon (NM_030013, exon 3 of 13)	9556	NM_030013	77951	Mm.197640	NM_030013		Cyp20a1	A930011N14Rik|Cypm	cytochrome P450, family 20, subfamily a, polypeptide 1	protein-coding
unique_peak1-1874-16-5-1.53330114154691-1.80287260729378	chr14	57893084	57893848	+	0	NA	TTS (NM_030004)	TTS (NM_030004)	123854	NM_030004	68631	Mm.25539	NM_030004	ENSMUSG00000021947	Cryl1	1110025H08Rik|A230106J09Rik|C85932|gul3dh	crystallin, lambda 1	protein-coding
unique_peak2-38763-7-13--1.00826409175941-0.697979855752659	chr7	122133018	122133376	+	0	NA	Intergenic	Intergenic	38409	NR_040319	101786	Mm.395157	NR_040317		A730082K24Rik	AU044236	RIKEN cDNA A730082K24 gene	ncRNA
common_peak1-15287-23-45--0.801794451547932-1.41868709588403	chr4	41135505	41136318	+	0	NA	intron (NM_026275, intron 3 of 4)	RSINE1|SINE|B4	52857	NM_026275	67615	Mm.389540	NM_026275	ENSMUSG00000036241	Ube2r2	1200003M11Rik|Cdc34b|Ubc3b	ubiquitin-conjugating enzyme E2R 2	protein-coding
unique_peak2-37438-4-4--0.345388608740609-0.864171920961574	chr4	154160872	154161215	+	0	NA	Intergenic	Intergenic	-69266	NM_172878	242800	Mm.72944	NM_172878	ENSMUSG00000046637	Ttc34	4932418L02|B230396O12Rik	tetratricopeptide repeat domain 34	protein-coding
unique_peak2-36523-4-14--1.93035110946177-2.23384849113406	chr2	163418972	163419561	+	0	NA	Intergenic	ID_B1|SINE|B4	-8784	NM_181734	76080	Mm.89828	NM_029512	ENSMUSG00000017679	Ttpal	3110080A02Rik|5830472M02Rik	tocopherol (alpha) transfer protein-like	protein-coding
common_peak2-23458-89-36-1.82551338919705-12.7688183484298	chr15	67146165	67147636	+	0	NA	intron (NR_045140, intron 5 of 8)	MER5A|DNA|MER1_type	88569	NR_045140	69334	Mm.63770	NR_045140		1700012I11Rik	-	RIKEN cDNA 1700012I11 gene	ncRNA
unique_peak2-36621-4-6--0.830815435910851-0.989110657569874	chr3	58687300	58687713	+	0	NA	intron (NM_153384, intron 1 of 3)	intron (NM_153384, intron 1 of 3)	1628	NM_153386	229320	Mm.131502	NM_153384	ENSMUSG00000043850	Clrn1	A130002D11Rik|USH3|Ush3a	clarin 1	protein-coding
unique_peak1-4315-15-7-1.01216475055566-1.08658567012551	chr2	150777499	150778287	+	0	NA	intron (NM_207204, intron 16 of 23)	MT2A|LTR|ERVL	42563	NM_001163476	69270	Mm.271603	NM_027014	ENSMUSG00000027454	Gins1	2810418N01Rik|Gins4|PSF1|mKIAA0186	GINS complex subunit 1 (Psf1 homolog)	protein-coding
common_peak2-29873-8-5-0.420259917226415-1.10484139239135	chr6	108541895	108542227	+	0	NA	intron (NR_104577, intron 3 of 6)	intron (NR_104577, intron 3 of 6)	31100	NR_040757	75394	Mm.395061	NR_040757	ENSMUSG00000087341	0610040F04Rik	-	RIKEN cDNA 0610040F04 gene	ncRNA
common_peak2-26722-16-20--0.274053780510699-0.353907621462756	chr2	130871208	130871918	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-2739	NM_001136063	14588	Mm.198399	NM_020014	ENSMUSG00000027316	Gfra4	AW060733|G630015H18Rik	glial cell line derived neurotrophic factor family receptor alpha 4	protein-coding
common_peak2-25200-11-11--0.0762689164695427-0.301029995663976	chr18	60613637	60614098	+	0	NA	Intergenic	Intergenic	47770	NM_134133	106878	Mm.273197	NM_134133	ENSMUSG00000038059	Smim3	2010002N04Rik|AI195350|AW561905|Nid67|cI-41	small integral membrane protein 3	protein-coding
unique_peak2-35122-5-6--0.511735258063458-0.947717972411649	chr16	25586829	25587332	+	0	NA	Intergenic	Lx2B|LINE|L1	-96771	NM_001127259	22061	Mm.20894	NM_011641	ENSMUSG00000022510	Trp63	AI462811|Ket|P51/P63|P63|P73l|Tp63|Trp53rp1	transformation related protein 63	protein-coding
common_peak1-13840-13-15--0.221527969362231-0.308519316180257	chr2	59881947	59882632	+	0	NA	intron (NM_001001182, intron 2 of 35)	intron (NM_001001182, intron 2 of 35)	81508	NM_001001182	407823	Mm.228071	NM_001001182	ENSMUSG00000026987	Baz2b	5830435C13Rik|BC053917|D2Ertd794e	bromodomain adjacent to zinc finger domain, 2B	protein-coding
unique_peak2-38055-7-7--0.200909169701811-0.97990265578305	chr6	47328344	47328766	+	0	NA	Intergenic	RMER1B|Other|Other	-75768	NM_012042	26965	Mm.87611	NM_012042	ENSMUSG00000029686	Cul1	-	cullin 1	protein-coding
unique_peak1-132-9-1-2.18961340640422-2.31132995230379	chr1	64824999	64825474	+	0	NA	Intergenic	ID_B1|SINE|B4	-40912	NM_022721	14367	Mm.150813	NM_022721	ENSMUSG00000045005	Fzd5	5330434N09Rik|AI427138|Fz-5|Fz5|mFz5	frizzled homolog 5 (Drosophila)	protein-coding
common_peak2-27595-8-5-0.420259917226415-1.10484139239135	chr3	102752164	102752605	+	0	NA	intron (NM_201619, intron 7 of 10)	intron (NM_201619, intron 7 of 10)	-12361	NM_011516	20957	Mm.243849	NM_011516	ENSMUSG00000027855	Sycp1	SCP1	synaptonemal complex protein 1	protein-coding
common_peak2-28972-35-66--0.634718931995268-1.36285458319551	chr5	104046140	104048074	+	0	NA	intron (NM_029415, intron 2 of 5)	intron (NM_029415, intron 2 of 5)	11315	NM_029415	75750	Mm.7446	NM_029415	ENSMUSG00000029321	Slc10a6	8430417G17Rik|C78479|Soat	solute carrier family 10 (sodium/bile acid cotransporter family), member 6	protein-coding
unique_peak2-32681-3-10--1.87341470859657-1.75805390616669	chr1	136683393	136683805	+	0	NA	intron (NM_001081307, intron 18 of 23)	intron (NM_001081307, intron 18 of 23)	16699	NR_015606	329251	Mm.188709	NM_001081307	ENSMUSG00000073557	Ppp1r12b	1810037O03Rik|9530009M10Rik|AI132431|Mypt2	protein phosphatase 1, regulatory (inhibitor) subunit 12B	protein-coding
common_peak2-22252-13-16--0.30899081061257-0.330004445983672	chr13	3537472	3538067	+	0	NA	intron (NM_008112, intron 1 of 10)	CpG	448	NM_008112	14569	Mm.153226	NM_008112	ENSMUSG00000021218	Gdi2	GDI-B|GDIB|Gdi3	guanosine diphosphate (GDP) dissociation inhibitor 2	protein-coding
common_peak1-12195-50-53-0.286052814315484-0.610031908571722	chr17	32363366	32364842	+	0	NA	intron (NM_001286630, intron 3 of 19)	intron (NM_001286630, intron 3 of 19)	-14761	NR_102329	100043434		NR_102329		Gm4432	-	predicted gene 4432	pseudo
common_peak1-16580-33-18-1.08341004908194-2.15925086250253	chr5	147305086	147306311	+	0	NA	TTS (NM_001243110)	TTS (NM_001243110)	2759	NM_001243110	622924	Mm.389722	NM_001243110	ENSMUSG00000096527	Gm6370	-	predicted gene 6370	protein-coding
common_peak1-8024-9-9--0.132314688483142-1.03275496310833	chr1	169732331	169732801	+	0	NA	intron (NM_033652, intron 3 of 7)	intron (NM_033652, intron 3 of 7)	112877	NM_033652	110648	Mm.330081	NM_033652	ENSMUSG00000026686	Lmx1a	Lmx1.1|dr|dreher|sst	LIM homeobox transcription factor 1 alpha	protein-coding
common_peak2-31740-5-12--1.40482005414695-1.62698961692433	chr9	15238431	15238844	+	0	NA	Intergenic	ETnERV2-int|LTR|ERVK	-71302	NM_133214	170748	Mm.86572	NM_133214	ENSMUSG00000058173	Smco4	Fn5	single-pass membrane protein with coiled-coil domains 4	protein-coding
common_peak1-10208-26-28-0.0699180970308904-0.316008636696532	chr13	48625084	48626198	+	0	NA	Intergenic	Intergenic	5842	NR_029656	387247		NR_029656	miRBase:MI0000405	Mirlet7d	Mirnlet7d|mmu-let-7d	microRNA let7d	ncRNA
unique_peak2-35391-0-7--3.84013093047421-1.80617997398389	chr17	31379783	31380155	+	0	NA	TTS (NM_177823)	TTS (NM_177823)	34332	NM_025290	22092	Mm.12743	NM_025290	ENSMUSG00000024033	Rsph1	MCA|Tsga2	radial spoke head 1 homolog (Chlamydomonas)	protein-coding
common_peak2-32072-23-52--1.00615295005412-2.21947156384788	chr9	95749583	95750357	+	0	NA	Intergenic	B4A|SINE|B4	-4272	NM_001033210	102502	Mm.11869	NM_001033210	ENSMUSG00000049493	Pls1	AI427122	plastin 1 (I-isoform)	protein-coding
unique_peak2-36913-4-4--0.345388608740609-0.864171920961574	chr3	98028164	98028456	+	0	NA	intron (NM_026328, intron 1 of 5)	intron (NM_026328, intron 1 of 5)	2231	NM_026328	67709	Mm.46306	NM_026328	ENSMUSG00000027876	Reg4	2010002L15Rik|GISP|RELP	regenerating islet-derived family, member 4	protein-coding
common_peak2-30924-25-50--0.810575436626389-1.52790159704429	chr7	144941730	144943467	+	0	NA	Intergenic	Intergenic	313241	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
common_peak1-16471-59-73-0.115910635243628-0.370598165309234	chr5	137102183	137104038	+	0	NA	Intergenic	Intergenic	-59750	NM_001291238	13047	Mm.320317	NM_009986	ENSMUSG00000029705	Cux1	CDP|Cutl1|Cux|Cux-1	cut-like homeobox 1	protein-coding
common_peak2-28441-7-12--0.901348887842903-1.31827279259406	chr4	149485260	149485904	+	0	NA	Intergenic	ID_B1|SINE|B4	-7871	NM_019741	56485	Mm.260220	NM_019741	ENSMUSG00000028976	Slc2a5	AI526984|Glut5|Slc5a	solute carrier family 2 (facilitated glucose transporter), member 5	protein-coding
common_peak2-19881-38-48--0.0432571848166781-0.301029995664001	chr1	93754060	93755534	+	0	NA	Intergenic	Intergenic	56743	NM_007855	13345	Mm.9474	NM_007855	ENSMUSG00000007805	Twist2	Dermo1|bHLHa39	twist basic helix-loop-helix transcription factor 2	protein-coding
unique_peak2-35708-7-11--0.785871670422967-1.21681515183528	chr18	32137734	32138455	+	0	NA	intron (NM_032394, intron 25 of 46)	L1_Mur3|LINE|L1	-28804	NM_001025381	574402	Mm.391108	NM_001025381	ENSMUSG00000052229	Gpr17	AI853548	G protein-coupled receptor 17	protein-coding
unique_peak2-32484-5-7--0.704380336005853-1.01466476204226	chr1	36475662	36476079	+	0	NA	intron (NM_001277076, intron 45 of 52)	ORR1A2|LTR|MaLR	26214	NM_001013374	214895	Mm.287854	NM_001013374	ENSMUSG00000001143	Lman2l	A630028F14Rik|VIP36-like|VIPL	lectin, mannose-binding 2-like	protein-coding
unique_peak2-39790-2-8--2.08737925770563-1.65811743852845	chrX	12673219	12673591	+	0	NA	intron (NM_009481, intron 2 of 44)	intron (NM_009481, intron 2 of 44)	24781	NM_009481	22284	Mm.242646	NM_009481	ENSMUSG00000031010	Usp9x	5730589N07Rik|AA407302|AA407699|AL022658|AL022749|Dffrx|FAF-X|Fafl	ubiquitin specific peptidase 9, X chromosome	protein-coding
common_peak1-19359-9-17--0.980311595038092-0.844317084070804	chrX	13042177	13042661	+	0	NA	Intergenic	Intergenic	-2379	NM_173415	236690	Mm.90233	NM_173415	ENSMUSG00000051228	Nyx	CLNP|CSNB1|CSNB4|nob	nyctalopin	protein-coding
unique_peak2-36479-6-9--0.75652998450706-1.11707584880836	chr2	150607957	150608390	+	0	NA	Intergenic	Intergenic	-4359	NM_153781	110078	Mm.222584	NM_153781	ENSMUSG00000033059	Pygb	-	brain glycogen phosphorylase	protein-coding
unique_peak1-7013-15-2-2.4272022498345-3.53487848679804	chr8	123884238	123884926	+	0	NA	Intergenic	Intergenic	181272	NM_029597	76405	Mm.165697	NM_029597	ENSMUSG00000031809	1700018B08Rik	1700084O22Rik	RIKEN cDNA 1700018B08 gene	protein-coding
common_peak2-30829-11-14--0.398197011356905-0.379391706698377	chr7	130977358	130977967	+	0	NA	Intergenic	Intergenic	-149033	NM_001252072	628779	Mm.40210	NM_001252072	ENSMUSG00000078591	Hs3st4	EG628779|Gm6915	heparan sulfate (glucosamine) 3-O-sulfotransferase 4	protein-coding
common_peak1-19158-52-74--0.120558700230181-0.339000539072378	chr9	95511020	95513008	+	0	NA	Intergenic	MTD|LTR|MaLR	-26033	NM_029620	76477	Mm.46016	NM_029620		Pcolce2	2400001O18Rik|Pcpe2	procollagen C-endopeptidase enhancer 2	protein-coding
unique_peak2-33521-7-8--0.370834171144123-1.00793137938329	chr11	76026991	76027486	+	0	NA	exon (NM_177367, exon 2 of 2)	exon (NM_177367, exon 2 of 2)	3836	NM_177367	276919	Mm.482713	NM_177367	ENSMUSG00000049396	Gemin4	4932415L08Rik|AU015359	gem (nuclear organelle) associated protein 4	protein-coding
unique_peak1-22-9-1-2.18961340640422-2.31132995230379	chr1	6623432	6623927	+	0	NA	intron (NM_001244693, intron 2 of 22)	intron (NM_001244693, intron 2 of 22)	-96453	NR_045189	240690	Mm.234612	NM_173868	ENSMUSG00000033740	St18	AV348974|Myt3|NZF-3|Nzf3|mKIAA0535	suppression of tumorigenicity 18	protein-coding
unique_peak1-408-12-6-0.841421063030034-1.58711810488664	chr1	157046846	157047569	+	0	NA	intron (NM_021433, intron 7 of 7)	intron (NM_021433, intron 7 of 7)	41374	NM_021433	58244	Mm.66264	NM_021433	ENSMUSG00000026470	Stx6	2310039E05Rik|2410005I16Rik|AA437559|AI415714|AI845861	syntaxin 6	protein-coding
common_peak1-13942-22-30--0.30691220529947-0.399869693390336	chr2	90847225	90847777	+	0	NA	intron (NM_017368, intron 9 of 14)	B2_Mm1a|SINE|B2	-28283	NM_009023	19400	Mm.1272	NM_009023	ENSMUSG00000002104	Rapsn	43kDa|Nraps|Raps|rapsyn	receptor-associated protein of the synapse	protein-coding
unique_peak1-4194-23-3-2.72176750450908-4.84202874224997	chr2	117837970	117838845	+	0	NA	Intergenic	B3A|SINE|B2	-99251	NM_011580	21825	Mm.4159	NM_011580	ENSMUSG00000040152	Thbs1	TSP-1|TSP1|Thbs-1|tbsp1	thrombospondin 1	protein-coding
common_peak1-7700-23-9-1.39983940962172-2.17218792383888	chr1	84407017	84408167	+	0	NA	intron (NM_152915, intron 9 of 12)	intron (NM_152915, intron 9 of 12)	-126372	NM_001003948	98496	Mm.187470	NM_001003948	ENSMUSG00000045658	Pid1	5033414K04Rik|NYGGF4	phosphotyrosine interaction domain containing 1	protein-coding
common_peak1-13375-76-38-1.47654216700103-8.06805609725411	chr19	46356087	46359233	+	0	NA	exon (NM_178930, exon 34 of 40)	exon (NM_178930, exon 34 of 40)	-21567	NM_001177369	18034	Mm.102365	NM_019408	ENSMUSG00000025225	Nfkb2	NF-kappaB2|lyt|p49|p49/p100|p50B|p52	nuclear factor of kappa light polypeptide gene enhancer in B cells 2, p49/p100	protein-coding
unique_peak1-6619-8-0-3.00522241794757-2.70926996097583	chr8	4489400	4489944	+	0	NA	Intergenic	MTC|LTR|MaLR	-3733	NM_026058	67260	Mm.35511	NM_026058	ENSMUSG00000008206	Cers4	2900019C14Rik|Lass4|Trh1	ceramide synthase 4	protein-coding
common_peak1-15606-14-11-0.314253659636488-0.435191258261915	chr4	132308375	132309195	+	0	NA	intron (NM_133888, intron 1 of 7)	MIRb|SINE|MIR	4301	NM_133888	100340	Mm.287187	NM_133888	ENSMUSG00000028885	Smpdl3b	1110054A24Rik|AU045240|Asml3b	sphingomyelin phosphodiesterase, acid-like 3B	protein-coding
unique_peak2-35808-4-7--1.02346051385325-1.09384600808989	chr18	61637726	61638084	+	0	NA	intron (NR_045419, intron 1 of 3)	B3|SINE|B2	6356	NR_045419	442846	Mm.417648	NR_045419		A530050N04Rik	-	RIKEN cDNA A530050N04 gene	ncRNA
common_peak2-31315-146-169-0.484212889308004-2.85348253540064	chr8	79208213	79210695	+	0	NA	Intergenic	Intergenic	214618	NR_028579	100039211	Mm.367571	NR_028579	ENSMUSG00000074235	Gm10649	ENSMUSG00000074235	predicted gene 10649	ncRNA
common_peak1-17628-18-8-1.14299414978604-1.45476480588849	chr7	46761031	46761845	+	0	NA	Intergenic	Intergenic	-11698	NM_001004139	70227	Mm.333800	NM_001004139	ENSMUSG00000068959	Zfp619	3000002G13Rik	zinc finger protein 619	protein-coding
common_peak1-9877-24-26-0.0383224006042484-0.317118655902073	chr12	84218392	84219487	+	0	NA	intron (NM_001282061, intron 15 of 16)	intron (NM_001282061, intron 15 of 16)	-178797	NR_046045	74283	Mm.398247	NR_046045		1700085C21Rik	-	RIKEN cDNA 1700085C21 gene	ncRNA
common_peak1-14099-17-15-0.218296338205038-0.403453972741633	chr2	125672804	125673594	+	0	NA	intron (NM_001285507, intron 3 of 12)	intron (NM_001285507, intron 3 of 12)	11619	NM_009939	12848	Mm.3596	NM_009939	ENSMUSG00000027206	Cops2	AI315723|C85265|Csn2|Sgn2|TRIP-15|Trip15	COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)	protein-coding
common_peak1-15300-27-15-0.991545950895236-1.66700866096458	chr4	43397742	43398927	+	0	NA	intron (NM_001037709, intron 1 of 11)	L1MB3|LINE|L1	3480	NM_001037709	100213	Mm.235730	NM_199057	ENSMUSG00000035969	Rusc2	AI840675|mKIAA0375	RUN and SH3 domain containing 2	protein-coding
common_peak2-29315-18-12-0.612479433087259-0.739965416525508	chr5	146681667	146682454	+	0	NA	intron (NM_007818, intron 4 of 12)	RMER17D|LTR|ERVK	9370	NM_007818	13112	Mm.332844	NM_007818	ENSMUSG00000056035	Cyp3a11	AI256190|Cyp3a|IIIAm1|Pcn	cytochrome P450, family 3, subfamily a, polypeptide 11	protein-coding
common_peak2-25224-9-8-0.0196884049619079-1.03275496310833	chr18	62001366	62001803	+	0	NA	intron (NM_001164491, intron 7 of 23)	MLT1K|LTR|MaLR	-55268	NM_178928	106877	Mm.26632	NM_178928	ENSMUSG00000033032	Afap1l1	AI173486	actin filament associated protein 1-like 1	protein-coding
common_peak1-13641-25-22-0.338287949288093-0.51032171069054	chr2	25982378	25983424	+	0	NA	Intergenic	Intergenic	-4570	NM_026495	67991	Mm.131074	NM_026495	ENSMUSG00000026932	Nacc2	0610020I02Rik|AI448087|Btbd14a|C030048H19Rik	nucleus accumbens associated 2, BEN and BTB (POZ) domain containing	protein-coding
common_peak2-30651-57-60-0.335295702516042-0.760282562501395	chr7	99182392	99183346	+	0	NA	intron (NM_011807, intron 10 of 22)	intron (NM_011807, intron 10 of 22)	-28035	NM_001243046	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
common_peak2-28828-24-20-0.400892479988956-0.591915184368645	chr5	66089599	66090469	+	0	NA	promoter-TSS (NM_001081321)	promoter-TSS (NM_001081321)	-939	NM_001081321	71521	Mm.278974	NM_027818	ENSMUSG00000029202	Pds5a	9030416H16Rik|E230024D05Rik|mKIAA0648	PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	protein-coding
common_peak1-17787-11-25--1.19174613388948-1.51503956548638	chr7	98308781	98309222	+	0	NA	intron (NM_011807, intron 1 of 22)	B4A|SINE|B4	69705	NM_011807	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
common_peak1-15656-11-12--0.191746133889479-0.310474156842889	chr4	135686541	135687071	+	0	NA	Intergenic	ID_B1|SINE|B4	-12931	NM_008321	15903	Mm.110	NM_008321		Id3	Hlh462|Idb3|bHLHb25	inhibitor of DNA binding 3	protein-coding
common_peak1-19510-23-6-1.91441258245148-3.22740510021752	chrX	166971233	166972258	+	0	NA	Intergenic	Intergenic	-554896	NR_029457	654820	Mm.34441	NM_001039559	ENSMUSG00000072844	G530011O06Rik	-	RIKEN cDNA G530011O06 gene	ncRNA
unique_peak1-3701-11-2-1.92373108353046-2.32232533660526	chr19	43927417	43927934	+	0	NA	intron (NM_028029, intron 13 of 15)	intron (NM_028029, intron 13 of 15)	14382	NR_033472	100038628	Mm.212585	NR_033472	ENSMUSG00000074828	Gm10768	ENSMUSG00000074828	predicted gene 10768	ncRNA
common_peak2-24970-25-34--0.26743311159986-0.387290225425543	chr18	6136289	6137139	+	0	NA	promoter-TSS (NM_029277)	promoter-TSS (NM_029277)	-618	NM_001039692	75415	Mm.239675	NM_029277	ENSMUSG00000041225	Arhgap12	2810011M08Rik	Rho GTPase activating protein 12	protein-coding
common_peak2-24498-10-10--0.103016273628528-0.301029995663987	chr17	25773814	25774310	+	0	NA	intron (NM_029624, intron 5 of 10)	intron (NM_029624, intron 5 of 10)	57943	NR_045520	76483	Mm.12787	NM_029624	ENSMUSG00000002279	Lmf1	2400010G15Rik|AW822050|Tmem112|cld	lipase maturation factor 1	protein-coding
common_peak2-22646-44-67--0.265570006681804-0.476339052167862	chr13	93303135	93304689	+	0	NA	Intergenic	Intergenic	-3147	NM_173392	218441	Mm.259585	NM_173392	ENSMUSG00000021706	Zfyve16	AI035632|B130024H06Rik|B130031L15|mKIAA0305	zinc finger, FYVE domain containing 16	protein-coding
common_peak1-16221-10-9-0.0344872501214071-1.05503135781948	chr5	99252930	99253506	+	0	NA	Intergenic	Intergenic	-30240	NM_173404	110075	Mm.209571	NM_173404	ENSMUSG00000029335	Bmp3	9130206H07|9530029I04Rik	bone morphogenetic protein 3	protein-coding
unique_peak1-3460-17-4-1.89636824331768-2.60953805094651	chr19	9103905	9104761	+	0	NA	intron (NR_104460, intron 4 of 6)	L2c|LINE|L2	40559	NM_001286518	66395	Mm.203866	NM_009643	ENSMUSG00000069833	Ahnak	DY6	AHNAK nucleoprotein (desmoyokin)	protein-coding
common_peak2-19550-9-12--0.510826311736872-0.394412252720706	chr1	181255997	181256747	+	0	NA	intron (NM_027188, intron 5 of 11)	intron (NM_027188, intron 5 of 11)	191762	NM_027188	69726	Mm.222338	NM_027188		Smyd3	2410008A19Rik|Zmynd1	SET and MYND domain containing 3	protein-coding
common_peak1-9801-19-25--0.297752391479405-0.376654945067947	chr12	69241528	69242508	+	0	NA	Intergenic	Intergenic	-471760	NR_033146	100316870	Mm.379794	NR_033146		Gm17821	-	DDB1 and CUL4 associated factor 5 pseudogene	pseudo
unique_peak1-6550-15-7-1.01216475055566-1.08658567012551	chr7	128364263	128365065	+	0	NA	Intergenic	Intergenic	137712	NM_139310	246190	Mm.221073	NM_139310	ENSMUSG00000034990	Otoa	-	otoancorin	protein-coding
common_peak1-11855-21-13-0.762134343208631-1.0220094258199	chr16	91546809	91547690	+	0	NA	promoter-TSS (NM_008338)	promoter-TSS (NM_008338)	-90	NM_008338	15980	Mm.249364	NM_008338		Ifngr2	Ifgr2|Ifgt	interferon gamma receptor 2	protein-coding
unique_peak1-750-6-6--0.241956811677302-0.947717972411649	chr10	115251879	115252406	+	0	NA	Intergenic	Intergenic	-2198	NM_001168680	216350	Mm.22270	NM_146010	ENSMUSG00000034127	Tspan8	C76990|E330007O21Rik|Tm4sf3	tetraspanin 8	protein-coding
common_peak2-20965-11-10-0.0492619656143161-0.31137425193576	chr11	20249564	20250007	+	0	NA	Intergenic	RLTR15|LTR|ERVK	-17069	NM_018861	55963	Mm.6379	NM_018861	ENSMUSG00000020142	Slc1a4	ASCT-1|ASCT1|AW045657|SATT	solute carrier family 1 (glutamate/neutral amino acid transporter), member 4	protein-coding
unique_peak1-4072-18-8-1.14299414978604-1.45476480588849	chr2	65224974	65225933	+	0	NA	Intergenic	LTRIS_Mm|LTR|ERV1	-22996	NR_105755	102466151		NR_105755	miRBase:MI0021865	Mir6337	mmu-mir-6337	microRNA mir-6337	ncRNA
common_peak2-24352-9-7-0.18961340640422-1.05908390183068	chr17	6001143	6001518	+	0	NA	intron (NM_001113352, intron 5 of 25)	intron (NM_001113352, intron 5 of 25)	-6250	NM_001290698	20975	Mm.236068	NM_011523	ENSMUSG00000023805	Synj2	AI481647|SJ2|mKIAA0348	synaptojanin 2	protein-coding
common_peak2-23879-33-73--0.878115803103421-2.42452383397919	chr16	8830088	8831156	+	0	NA	exon (NM_001081400, exon 1 of 4)	exon (NM_001081400, exon 1 of 4)	429	NM_001081400	69053	Mm.390868	NM_001081400	ENSMUSG00000022507	1810013L24Rik	1110017P05Rik|3010002C02Rik|AA792997|AW124177|Gm19906|R74903	RIKEN cDNA 1810013L24 gene	protein-coding
unique_peak1-7319-10-4-1.03448725012141-1.5150158574804	chr9	120825895	120826328	+	0	NA	Intergenic	L1MA4|LINE|L1	-1743	NR_040742	76402	Mm.436588	NR_040742		1700020M21Rik	-	RIKEN cDNA 1700020M21 gene	ncRNA
common_peak2-30882-10-11--0.228547155712387-0.31137425193576	chr7	141269170	141269621	+	0	NA	intron (NM_007400, intron 3 of 22)	intron (NM_007400, intron 3 of 22)	147385	NM_007400	11489	Mm.439714	NM_007400	ENSMUSG00000054555	Adam12	Mltna|mKIAA4001	a disintegrin and metallopeptidase domain 12 (meltrin alpha)	protein-coding
unique_peak2-33020-4-17--2.19338551529556-2.18192634393779	chr10	68039302	68039851	+	0	NA	Intergenic	Intergenic	-34953	NM_028491	73287	Mm.141830	NM_028491	ENSMUSG00000019945	1700040L02Rik	-	RIKEN cDNA 1700040L02 gene	protein-coding
common_peak2-31256-89-128-0.0237394994027484-0.308575821423186	chr8	70698049	70700559	+	0	NA	Intergenic	RLTR25A|LTR|ERVK	-101123	NM_028182	72281	Mm.40974	NM_028182	ENSMUSG00000053886	Sh2d4a	2210402M20Rik|SH2A	SH2 domain containing 4A	protein-coding
common_peak1-14136-18-30--0.641277159158523-0.738267116931589	chr2	131204533	131205411	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	-26344	NM_178607	51902	Mm.477523	NM_178607	ENSMUSG00000048911	Rnf24	2810473M14Rik|4930505A13Rik|AI317164|C86507|D2Ertd504e	ring finger protein 24	protein-coding
common_peak2-24873-50-99--0.602915873295772-1.74391249584712	chr17	80727348	80728781	+	0	NA	intron (NM_001145452, intron 1 of 17)	intron (NM_001145452, intron 1 of 17)	21317	NM_001145452	381112	Mm.360004	NM_001145452	ENSMUSG00000054901	Arhgef33	Gm941	Rho guanine nucleotide exchange factor (GEF) 33	protein-coding
unique_peak2-33626-5-6--0.511735258063458-0.947717972411649	chr11	97448622	97449046	+	0	NA	Intergenic	MT2B|LTR|ERVL	-10991	NR_045496	69729	Mm.233452	NR_045496	ENSMUSG00000085860	2410003L11Rik	-	RIKEN cDNA 2410003L11 gene	ncRNA
unique_peak1-2216-13-1-2.77847203063777-3.64038867156802	chr15	73446877	73447543	+	0	NA	intron (NM_001033219, intron 1 of 7)	PB1D7|SINE|Alu	7964	NM_001033219	106068	Mm.212813	NM_001033219	ENSMUSG00000079020	Slc45a4	9330175B01Rik|AW552276	solute carrier family 45, member 4	protein-coding
common_peak2-27540-9-4-0.867685311516858-1.36011389749466	chr3	96134022	96134348	+	0	NA	Intergenic	Intergenic	-36293	NM_010186	14129	Mm.150	NM_010186	ENSMUSG00000015947	Fcgr1	AI323638|AV092959|CD64|FcgammaRI|IGGHAFC	Fc receptor, IgG, high affinity I	protein-coding
common_peak1-11107-31-76--1.04154786988178-3.28485219588636	chr15	61985555	61986777	+	0	NA	intron (NR_003368, intron 3 of 8)	intron (NR_003368, intron 3 of 8)	64840	NR_003523	67552	Mm.484027	NM_026230		H2afy3	4933432H23Rik	H2A histone family, member Y3	pseudo
common_peak1-19452-33-39-0.00940946763816619-0.303778768325576	chrX	103493308	103494323	+	0	NA	Intergenic	L1Md_F3|LINE|L1	-11350	NR_105803	102465963		NR_105803	miRBase:MI0021913	Mir6382	mmu-mir-6382	microRNA mir-6382	ncRNA
common_peak1-10482-13-12-0.0780323124966764-0.334470287753051	chr13	114680026	114680688	+	0	NA	intron (NM_172595, intron 1 of 4)	intron (NM_172595, intron 1 of 4)	95641	NM_172595	218639	Mm.79837	NM_172595	ENSMUSG00000042348	Arl15	A430036I03|Arfrp2|C230032K13Rik	ADP-ribosylation factor-like 15	protein-coding
common_peak1-8181-19-12-0.702247608520594-0.840839978588874	chr10	69926295	69927055	+	0	NA	intron (NM_024244, intron 3 of 13)	ORR1A3|LTR|MaLR	23017	NM_001143776	71721	Mm.477813	NM_024244	ENSMUSG00000043259	Fam13c	1200015N20Rik|C030038O19Rik|mKIAA1796	family with sequence similarity 13, member C	protein-coding
common_peak2-31978-21-60--1.36124807229665-3.76223442633752	chr9	69453667	69454771	+	0	NA	Intergenic	L1Md_F2|LINE|L1	149468	NR_037296	100526560		NR_037296	miRBase:MI0014106	Mir3109	mmu-mir-3109	microRNA 3109	ncRNA
unique_peak2-39996-3-7--1.41398308995928-1.23214870625617	chrX	163908427	163908869	+	0	NA	TTS (NM_001290428)	TTS (NM_001290428)	-88017	NM_026662	110639	Mm.272955	NM_026662	ENSMUSG00000025742	Prps2	2610101M19Rik|AA589463|AI464149|Prps-2	phosphoribosyl pyrophosphate synthetase 2	protein-coding
common_peak1-13503-28-10-1.59352750118417-3.11713623526325	chr2	73023432	73024562	+	0	NA	intron (NM_025942, intron 4 of 10)	B1_Mur1|SINE|Alu	28507	NM_030091	67059	Mm.22661	NM_025942	ENSMUSG00000027108	Ola1	2510025G09Rik|2810405J23Rik|2810409H07Rik|Gtpbp9|PTD004	Obg-like ATPase 1	protein-coding
unique_peak1-3209-17-2-2.63333383748388-3.75443312462699	chr18	56978504	56979201	+	0	NA	intron (NM_177115, intron 1 of 4)	intron (NM_177115, intron 1 of 4)	106350	NM_177115	320253	Mm.312623	NM_177115	ENSMUSG00000032656	March3	6330411I15Rik|A530081L18Rik|AI843639|MARCH-III	membrane-associated ring finger (C3HC4) 3	protein-coding
common_peak1-7765-71-31-1.64444417871997-8.60563220560289	chr1	92214459	92216100	+	0	NA	Intergenic	L1MC4|LINE|L1	114724	NM_007722	12778	Mm.6522	NM_007722		Ackr3	AW541270|CXC-R7|CXCR-7|Cmkor1|Cxcr7|RDC-1|Rdc1	atypical chemokine receptor 3	protein-coding
unique_peak2-32638-2-9--2.23938235115068-1.87199725847353	chr1	128357096	128357676	+	0	NA	intron (NM_001081756, intron 3 of 16)	intron (NM_001081756, intron 3 of 16)	32118	NM_172484	210356	Mm.377234	NM_172484	ENSMUSG00000049690	Nckap5	8430408F21|D130011D22Rik|E030049G20Rik|Erih1|Erih2|Gm1548|Nap5	NCK-associated protein 5	protein-coding
common_peak1-9106-16-32--0.926130477090392-1.31432283146954	chr11	70844743	70845460	+	0	NA	TTS (NM_134022)	TTS (NM_134022)	2018	NM_134022	103712	Mm.27768	NM_134022		6330403K07Rik	AI415455|AV161034|UGS148	RIKEN cDNA 6330403K07 gene	protein-coding
common_peak1-15788-20-19-0.16614668970383-0.348739088570342	chr4	155563708	155564704	+	0	NA	intron (NM_021604, intron 2 of 35)	intron (NM_021604, intron 2 of 35)	7391	NM_021604	11603	Mm.273098	NM_021604	ENSMUSG00000041936	Agrn	Agrin|nmf380	agrin	protein-coding
common_peak2-22673-11-13--0.298661337805991-0.337263207250336	chr13	97241174	97241875	+	0	NA	promoter-TSS (NM_001042714)	promoter-TSS (NM_001042714)	-409	NM_001042714	271144	Mm.470057	NM_001042714	ENSMUSG00000047117	Ankdd1b	9330128J19Rik	ankyrin repeat and death domain containing 1B	protein-coding
common_peak2-19593-18-10-0.853487532591054-1.03889213727317	chr1	23188346	23188905	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-79533	NM_025746	66755	Mm.431297	NM_025746	ENSMUSG00000073730	4933415F23Rik	-	RIKEN cDNA 4933415F23 gene	protein-coding
common_peak1-9151-38-24-0.927596469523806-2.07189913552604	chr11	76924207	76925972	+	0	NA	intron (NM_176965, intron 13 of 17)	L2|LINE|L2	-33150	NM_001012309	237859	Mm.156195	NM_001012309	ENSMUSG00000037958	Ccdc55	8030451K07|AI851076|AL022898|NSpr70|NSrp70|Nsrp1	coiled-coil domain containing 55	protein-coding
unique_peak1-119-6-0-2.5653981103803-2.10720996964787	chr1	60621468	60621930	+	0	NA	intron (NM_001045513, intron 1 of 13)	PB1D7|SINE|Alu	1910	NM_001045513	77300	Mm.440325	NM_001045513	ENSMUSG00000026014	Raph1	9430025M21Rik|C730009O10Rik|Lpd	Ras association (RalGDS/AF-6) and pleckstrin homology domains 1	protein-coding
unique_peak2-36261-6-10--0.894033508256995-1.21398586181642	chr2	58830612	58831023	+	0	NA	intron (NM_001001178, intron 10 of 14)	intron (NM_001001178, intron 10 of 14)	167867	NM_001001178	227933	Mm.330234	NM_177650	ENSMUSG00000036641	Ccdc148	5830402J09	coiled-coil domain containing 148	protein-coding
unique_peak2-33931-3-6--1.22133801201688-1.08602067057793	chr12	71015988	71016389	+	0	NA	intron (NM_178628, intron 2 of 14)	L1MB4|LINE|L1	-22038	NM_201519	399510	Mm.291936	NM_201519	ENSMUSG00000034761	Map4k5	4432415E19Rik|GCKR|KHS|MAPKKKK5	mitogen-activated protein kinase kinase kinase kinase 5	protein-coding
unique_peak2-33266-1-5--2.2120195109379-1.32905871926422	chr10	128603922	128604349	+	0	NA	Intergenic	Lx8|LINE|L1	-6097	NM_146547	258540	Mm.223077	NM_146547	ENSMUSG00000061367	Olfr771	MOR114-8	olfactory receptor 771	protein-coding
common_peak2-23389-27-20-0.599228528116475-0.90781512069806	chr15	58258816	58259637	+	0	NA	intron (NM_145959, intron 8 of 23)	intron (NM_145959, intron 8 of 23)	12203	NM_145959	210998	Mm.3224	NM_145959	ENSMUSG00000037119	D15Ertd621e	AV220772|BC033609|Fam91a1|SKIN|mKIAA0493	DNA segment, Chr 15, ERATO Doi 621, expressed	protein-coding
common_peak1-7602-12-6-0.841421063030034-1.58711810488664	chr1	58444764	58445479	+	0	NA	Intergenic	Intergenic	-4859	NM_025824	66882	Mm.21848	NM_025824	ENSMUSG00000051223	Bzw1	1200015E15Rik|mKIAA0005	basic leucine zipper and W2 domains 1	protein-coding
common_peak2-30939-35-45--0.092191697594509-0.310901174692144	chr8	4275386	4276378	+	0	NA	promoter-TSS (NM_011592)	promoter-TSS (NM_011592)	23	NM_011592	21856	Mm.195249	NM_011592	ENSMUSG00000002949	Timm44	0710005E20Rik|D8Ertd118e|Mimt44|Tim44	translocase of inner mitochondrial membrane 44	protein-coding
common_peak2-23169-30-38--0.115726809370376-0.312769113767451	chr15	10485345	10486696	+	0	NA	intron (NM_029430, intron 1 of 10)	B3|SINE|B2	2403	NM_029430	75777	Mm.48812	NM_029430	ENSMUSG00000022249	Ttc23l	4930401A09Rik	tetratricopeptide repeat domain 23-like	protein-coding
unique_peak1-4308-17-8-1.04837133676273-1.30305656033811	chr2	148186186	148186991	+	0	NA	Intergenic	Intergenic	-34525	NM_009219	20608	Mm.35324	NM_009219	ENSMUSG00000037014	Sstr4	Smstr4|sst4	somatostatin receptor 4	protein-coding
common_peak1-10410-9-8-0.0196884049619079-1.03275496310833	chr13	98317415	98317881	+	0	NA	Intergenic	B4|SINE|B4	-12307	NR_046157	328314	Mm.138047	NR_046157		Gm5086	B230311A21|EG328314	predicted gene 5086	ncRNA
common_peak1-9171-9-9--0.132314688483142-1.03275496310833	chr11	78178758	78179248	+	0	NA	intron (NM_008238, intron 6 of 8)	intron (NM_008238, intron 6 of 8)	21107	NM_008238	15218	Mm.4496	NM_008238	ENSMUSG00000002057	Foxn1	D11Bhm185e|Fkh19|HFH-11|Hfh11|Whn|nu|nude	forkhead box N1	protein-coding
common_peak2-22116-53-60-0.210235674853042-0.501837478813393	chr12	83631673	83633130	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-85624	NM_015812	50779	Mm.153013	NM_015812	ENSMUSG00000021219	Rgs6	-	regulator of G-protein signaling 6	protein-coding
unique_peak1-6118-15-5-1.4272022498345-1.61682445937017	chr6	128597227	128598001	+	0	NA	Intergenic	RLTR13B4|LTR|ERVK	-14789	NM_053165	94071	Mm.197689	NM_053165	ENSMUSG00000030364	Clec2h	Clrf|clr-f	C-type lectin domain family 2, member h	protein-coding
common_peak1-15143-11-8-0.338768582809301-1.14218153353838	chr3	144763720	144764243	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	-1976	NM_178697	229933	Mm.331420	NM_178697	ENSMUSG00000036960	Clca5	4732440A06|AI586120|Clca2	chloride channel calcium activated 5	protein-coding
common_peak2-31163-24-18-0.545282389324131-0.776879508296351	chr8	45610466	45611251	+	0	NA	Intergenic	Intergenic	-424704	NM_001081286	14107	Mm.27365	NM_001081286	ENSMUSG00000070047	Fat1	2310038E12Rik|AU023433|Fath|mFat1	FAT tumor suppressor homolog 1 (Drosophila)	protein-coding
common_peak1-16254-19-6-1.59533240460408-2.21753093801298	chr5	105684019	105684920	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-15917	NM_001039646	626578	Mm.275893	NM_001039646	ENSMUSG00000054588	Gbp10	-	guanylate-binding protein 10	protein-coding
unique_peak2-37932-5-14--1.61127093161437-1.95509489018123	chr5	146698620	146699446	+	0	NA	Intergenic	L1Md_A|LINE|L1	-7603	NM_007818	13112	Mm.332844	NM_007818	ENSMUSG00000056035	Cyp3a11	AI256190|Cyp3a|IIIAm1|Pcn	cytochrome P450, family 3, subfamily a, polypeptide 11	protein-coding
common_peak1-14523-9-13--0.617741515653384-0.459837087125828	chr3	27863584	27864061	+	0	NA	intron (NM_001164056, intron 2 of 26)	intron (NM_001164056, intron 2 of 26)	-19271	NM_008875	18805	Mm.212039	NM_008875	ENSMUSG00000027695	Pld1	AA536939|C85393|Pld1a|Pld1b	phospholipase D1	protein-coding
common_peak2-29672-28-10-1.59352750118417-3.11713623526325	chr6	72295851	72296452	+	0	NA	promoter-TSS (NM_138592)	promoter-TSS (NM_138592)	-982	NM_138592	28035	Mm.281900	NM_138592	ENSMUSG00000056305	Usp39	AA408960|AI894154|CGI-21|D6Wsu157e|SAD1	ubiquitin specific peptidase 39	protein-coding
common_peak2-30325-11-12--0.191746133889479-0.310474156842889	chr7	25072531	25073088	+	0	NA	Intergenic	Intergenic	11759	NM_009561	22719	Mm.12832	NM_009561	ENSMUSG00000050605	Zfp61	-	zinc finger protein 61	protein-coding
unique_peak2-33045-3-7--1.41398308995928-1.23214870625617	chr10	75105882	75106293	+	0	NA	intron (NM_027890, intron 1 of 14)	intron (NM_027890, intron 1 of 14)	666	NM_001162913	71733	Mm.247956	NM_027890	ENSMUSG00000006342	Susd2	1200011D11Rik	sushi domain containing 2	protein-coding
common_peak2-20788-8-6-0.197867495889966-1.03789460276074	chr10	120637437	120637856	+	0	NA	Intergenic	Intergenic	110599	NM_029057	74694	Mm.233833	NM_029057	ENSMUSG00000052302	Tbc1d30	4930505D03Rik	TBC1 domain family, member 30	protein-coding
common_peak1-12426-9-4-0.867685311516858-1.36011389749466	chr17	75255050	75255553	+	0	NA	intron (NM_152817, intron 16 of 19)	intron (NM_152817, intron 16 of 19)	138211	NM_152817	74196	Mm.209503	NM_152817	ENSMUSG00000024078	Ttc27	2610511O17Rik	tetratricopeptide repeat domain 27	protein-coding
unique_peak1-6938-10-3-1.35641534500877-1.75805390616669	chr8	108897451	108897955	+	0	NA	Intergenic	Intergenic	-35815	NM_021491	58994	Mm.23298	NM_021491	ENSMUSG00000031906	Smpd3	4631433G07Rik|AI427456|AW537966|fro|nSMase2	sphingomyelin phosphodiesterase 3, neutral	protein-coding
common_peak2-22469-44-82--0.553146596778389-1.28274482643494	chr13	47105516	47106827	+	0	NA	Intergenic	Intergenic	4048	NM_175340	105193	Mm.25593	NM_175340	ENSMUSG00000044231	Nhlrc1	AI505271|B230309E09Rik|EPM2B	NHL repeat containing 1	protein-coding
common_peak1-18798-22-7-1.6472841050874-2.63337704757512	chr9	54640471	54641665	+	0	NA	Intergenic	Lx5|LINE|L1	28513	NM_013496	12903	Mm.34797	NM_013496	ENSMUSG00000032291	Crabp1	AI326249|CRABP-I|Crabp-1|CrabpI|Rbp-5	cellular retinoic acid binding protein I	protein-coding
common_peak2-30127-8-11--0.579740082773585-1.14218153353838	chr6	137647823	137648399	+	0	NA	Intergenic	Intergenic	-35492	NM_011499	20901	Mm.22584	NM_011499	ENSMUSG00000030224	Strap	AW557906|C78091|C79202|Unrip	serine/threonine kinase receptor associated protein	protein-coding
common_peak1-9023-21-21-0.110057646628938-0.344491671143527	chr11	61637258	61638063	+	0	NA	intron (NM_013881, intron 12 of 26)	intron (NM_013881, intron 12 of 26)	30934	NM_013881	29869	Mm.162025	NM_013881	ENSMUSG00000004798	Ulk2	A830085I22Rik|AU015340|Unc51.2|mKIAA0623	unc-51 like kinase 2	protein-coding
common_peak1-19200-13-42--1.64779272406433-3.48244293670685	chr9	101251194	101251785	+	0	NA	Intergenic	Intergenic	6965	NR_110509	102633035	Mm.411422	NR_110509		LOC102633035	-	uncharacterized LOC102633035	ncRNA
unique_peak1-246-16-1-3.11826364226806-4.46429741251234	chr1	91039825	91040672	+	0	NA	exon (NM_133816, exon 4 of 6)	exon (NM_133816, exon 4 of 6)	49879	NR_106129	102465771		NR_106129		Mir7669	mmu-mir-7669	microRNA mir-7669	ncRNA
common_peak2-30840-7-8--0.370834171144123-1.00793137938329	chr7	133112433	133112792	+	0	NA	intron (NM_001101488, intron 2 of 6)	intron (NM_001101488, intron 2 of 6)	113313	NM_001101488	269994	Mm.39599	NM_001101488	ENSMUSG00000046182	Gsg1l	AI852434|C230098I05Rik|G630023A01Rik|Gm637|g1l	GSG1-like	protein-coding
common_peak1-18731-31-105--1.50268178375008-7.67068467037756	chr8	123653546	123654645	+	0	NA	3' UTR (NM_008024, exon 1 of 1)	3' UTR (NM_008024, exon 1 of 1)	2510	NM_008024	14241	Mm.5111	NM_008024	ENSMUSG00000097084	Foxl1	FREAC7|Fkh6|fkh-6	forkhead box L1	protein-coding
common_peak2-24127-16-7-1.11826364226806-1.23399803405144	chr16	34681346	34681718	+	0	NA	Intergenic	Intergenic	-9170	NM_172824	239839	Mm.272045	NM_172824	ENSMUSG00000022833	Ccdc14	G630039H03Rik	coiled-coil domain containing 14	protein-coding
unique_peak1-6431-11-6-0.701338662194009-1.32595962126035	chr7	97439356	97439862	+	0	NA	Intergenic	Intergenic	-11256	NM_001289583	83671	Mm.26751	NM_031394	ENSMUSG00000030616	Sytl2	AI266830|Slp2|mKIAA1597	synaptotagmin-like 2	protein-coding
unique_peak1-3679-11-4-1.18676548936425-1.68134727924692	chr19	42124704	42125259	+	0	NA	intron (NM_026152, intron 1 of 6)	MamRep4096|DNA|hAT?	-1737	NM_025752	66765	Mm.440412	NM_025752	ENSMUSG00000090369	4933411K16Rik	-	RIKEN cDNA 4933411K16 gene	protein-coding
unique_peak2-35666-9-18--1.05831410703937-0.965105923112245	chr18	9213231	9214032	+	0	NA	exon (NM_008058, exon 1 of 1)	exon (NM_008058, exon 1 of 1)	777	NM_008058	14370	Mm.184289	NM_008058	ENSMUSG00000036904	Fzd8	Fz8	frizzled homolog 8 (Drosophila)	protein-coding
unique_peak2-32851-8-7-0.00522241794757061-1.00793137938329	chr1	194687755	194688174	+	0	NA	Intergenic	Intergenic	-6018	NM_198247	214791	Mm.22806	NM_198247	ENSMUSG00000016262	Sertad4	4833404A09|C130018M11Rik	SERTA domain containing 4	protein-coding
unique_peak2-33805-9-5-0.604650905683064-1.21398586181642	chr11	120643149	120643664	+	0	NA	intron (NM_009053, intron 6 of 7)	intron (NM_009053, intron 6 of 7)	2112	NM_009053	19719	Mm.871	NM_009053	ENSMUSG00000025158	Rfng	-	RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase	protein-coding
unique_peak1-4923-11-5-0.923731083530457-1.477227296591	chr4	57278734	57279291	+	0	NA	intron (NM_011207, intron 2 of 25)	(CA)n|Simple_repeat|Simple_repeat	35697	NM_011207	545622	Mm.246552	NM_011207	ENSMUSG00000038764	Ptpn3	9530011I20Rik|PTP-H1|PTPCL	protein tyrosine phosphatase, non-receptor type 3	protein-coding
unique_peak1-4306-8-3-1.00522241794757-1.39487600375387	chr2	148024439	148025003	+	0	NA	Intergenic	Intergenic	-152016	NM_010446	15376	Mm.938	NM_010446	ENSMUSG00000037025	Foxa2	HNF3-beta|HNF3beta|Hnf-3b|Hnf3b|Tcf-3b|Tcf3b	forkhead box A2	protein-coding
unique_peak2-37305-6-11--1.01956439034085-1.32595962126035	chr4	123571854	123572274	+	0	NA	Intergenic	Intergenic	-10192	NM_019660	56309	Mm.446553	NM_019660	ENSMUSG00000028647	Mycbp	5730488M09Rik|AW552132|AW742590|Amy-1	c-myc binding protein	protein-coding
unique_peak1-1636-12-3-1.64877598508764-2.36932189928148	chr13	49320085	49320717	+	0	NA	Intergenic	RLTR26|LTR|ERVK	-9006	NM_026738	68480	Mm.3336	NM_026738	ENSMUSG00000037960	1110007C09Rik	AI851695|Bincard	RIKEN cDNA 1110007C09 gene	protein-coding
unique_peak1-1095-7-3-0.799090830298189-1.23214870625617	chr11	88661872	88662389	+	0	NA	Intergenic	B1_Mur4|SINE|Alu	50687	NM_009648	11640	Mm.2969	NM_009648	ENSMUSG00000018428	Akap1	AKAP121|AKAP84|Akap|C76494|C81186|DAKAP1|S-AKAP84	A kinase (PRKA) anchor protein 1	protein-coding
common_peak2-21640-16-7-1.11826364226806-1.23399803405144	chr11	101620203	101620684	+	0	NA	intron (NM_144831, intron 18 of 22)	intron (NM_144831, intron 18 of 22)	26173	NM_144831	217207	Mm.28186	NM_144831	ENSMUSG00000034931	Dhx8	Ddx8|mDEAH6|mKIAA4096	DEAH (Asp-Glu-Ala-His) box polypeptide 8	protein-coding
common_peak2-23373-23-12-1.02132778636799-1.44787515926925	chr15	55138898	55139478	+	0	NA	promoter-TSS (NM_181277)	promoter-TSS (NM_181277)	-117	NM_181277	12818	Mm.297859	NM_181277	ENSMUSG00000022371	Col14a1	5730412L22Rik|AW108078	collagen, type XIV, alpha 1	protein-coding
unique_peak2-39168-6-6--0.241956811677302-0.947717972411649	chr8	94532905	94533349	+	0	NA	Intergenic	Intergenic	-207574	NM_008393	16373	Mm.238044	NM_008393	ENSMUSG00000031734	Irx3	AI894186	Iroquois related homeobox 3	protein-coding
common_peak2-31500-15-34--1.11711826638931-1.74023246399357	chr8	107056119	107057627	+	0	NA	intron (NM_144931, intron 1 of 19)	intron (NM_144931, intron 1 of 19)	1664	NM_144931	234664	Mm.237670	NM_144931	ENSMUSG00000031878	Nae1	59kDa|Appbp1	NEDD8 activating enzyme E1 subunit 1	protein-coding
common_peak2-20876-43-48-0.167853341408494-0.404412720632912	chr11	106215947	106217488	+	0	NA	Intergenic	Intergenic	-6013	NM_133199	110880	Mm.432528	NM_133199	ENSMUSG00000001027	Scn4a	Nav1.4|SkM1|mH2	sodium channel, voltage-gated, type IV, alpha	protein-coding
unique_peak1-2729-12-5-1.06381348436648-1.78669045979184	chr16	95769416	95770051	+	0	NA	Intergenic	Intergenic	-17761	NM_133659	13876	Mm.164531	NM_133659	ENSMUSG00000040732	Erg	D030036I24Rik	avian erythroblastosis virus E-26 (v-ets) oncogene related	protein-coding
unique_peak1-1946-9-0-3.18961340640422-3.01029995663981	chr14	98627100	98627624	+	0	NA	Intergenic	L1Md_T|LINE|L1	-58378	NM_007826	13134	Mm.320593	NM_007826	ENSMUSG00000055639	Dach1	Dac|Dach	dachshund 1 (Drosophila)	protein-coding
common_peak2-20322-23-27--0.0855874175485232-0.30512735654709	chr10	81559036	81560127	+	0	NA	Intergenic	Intergenic	-31177	NM_001163064	216177	Mm.482395	NM_001163064		AU041133	-	expressed sequence AU041133	protein-coding
common_peak1-18977-58-70-0.146202815385815-0.419148369111222	chr9	56106842	56108862	+	0	NA	exon (NM_172924, exon 4 of 7)	exon (NM_172924, exon 4 of 7)	-98975	NM_019793	56434	Mm.28484	NM_019793	ENSMUSG00000032324	Tspan3	1700055K04Rik|TM4-A|Tm4sf8	tetraspanin 3	protein-coding
unique_peak1-1490-19-6-1.59533240460408-2.21753093801298	chr13	28310683	28311620	+	0	NA	Intergenic	L1Md_F2|LINE|L1	76798	NM_023746	28078	Mm.155058	NM_023746	ENSMUSG00000017064	Prl5a1	1600013P04Rik|D13Wsu14e|PLP-L|Prlpl	prolactin family 5, subfamily a, member 1	protein-coding
unique_peak1-3387-20-11-0.903112283870037-1.11267835143409	chr19	3935302	3936326	+	0	NA	exon (NM_001161428, exon 2 of 10)	exon (NM_001161428, exon 2 of 10)	628	NM_001161428	54445	Mm.262094	NM_019449	ENSMUSG00000036908	Unc93b1	Unc-93B1|Unc93b	unc-93 homolog B1 (C. elegans)	protein-coding
unique_peak2-38616-3-7--1.41398308995928-1.23214870625617	chr7	80269640	80269989	+	0	NA	Intergenic	PB1D10|SINE|Alu	-22860	NR_046024	625243	Mm.261798	NR_046024		Gm6567	-	predicted gene 6567	ncRNA
common_peak1-8360-13-21--0.680959587999529-0.607095980551316	chr10	59509513	59510067	+	0	NA	intron (NM_001199187, intron 6 of 10)	intron (NM_001199187, intron 6 of 10)	43715	NM_001199187	69090	Mm.155839	NM_026937	ENSMUSG00000044475	Ascc1	1810015P09Rik|AI550520|ASC1p50|CGI-18	activating signal cointegrator 1 complex subunit 1	protein-coding
common_peak1-11388-37-25-0.825553353344727-1.67017740290565	chr15	97786248	97787819	+	0	NA	Intergenic	Intergenic	-7627	NM_201359	380967	Mm.196630	NM_201359	ENSMUSG00000052369	Tmem106c	AI046681|BC046621|D15Ertd405e	transmembrane protein 106C	protein-coding
common_peak1-9982-16-17--0.0516613591742505-0.301029995663984	chr13	23445467	23446220	+	0	NA	3' UTR (NM_001111107, exon 5 of 5)	3' UTR (NM_001111107, exon 5 of 5)	15234	NM_001286156	218100	Mm.286454	NM_172586	ENSMUSG00000046351	Zfp322a	Znf322|Znf322a	zinc finger protein 322A	protein-coding
unique_peak1-5046-8-8--0.164702583494742-1.00793137938329	chr4	134481187	134481595	+	0	NA	intron (NM_023665, intron 3 of 4)	intron (NM_023665, intron 3 of 4)	1851	NM_023665	27981	Mm.331964	NM_023665	ENSMUSG00000037266	Rsrp1	2700043I21Rik|D4Ucla2|D4Wsu53e	arginine/serine rich protein 1	protein-coding
common_peak2-28088-28-34--0.0763238971235038-0.304271119602326	chr4	86575190	86576389	+	0	NA	intron (NM_001290543, intron 5 of 5)	intron (NM_001290543, intron 5 of 5)	55471	NM_139306	230379	Mm.45019	NM_139306	ENSMUSG00000038007	Acer2	2410116I05Rik|Asah3l|CRG-L1|maCER2	alkaline ceramidase 2	protein-coding
common_peak2-27532-31-48--0.389471173302085-0.611014125894502	chr3	95929247	95930613	+	0	NA	intron (NM_001025613, intron 2 of 12)	B1F1|SINE|Alu	21480	NM_001025614	229603	Mm.272336	NM_001025613	ENSMUSG00000038495	Otud7b	2900060B22Rik|4930463P07Rik|AI462125|CEZANNE|Trabid2|Za20d1	OTU domain containing 7B	protein-coding
common_peak2-30027-30-31-0.169675409491873-0.382130460680153	chr6	125377046	125378361	+	0	NA	Intergenic	RLTR14|LTR|ERV1	-47181	NM_198604	213522	Mm.333396	NM_198604	ENSMUSG00000038167	Plekhg6	BC026778|Gm155	pleckstrin homology domain containing, family G (with RhoGef domain) member 6	protein-coding
unique_peak1-6362-12-6-0.841421063030034-1.58711810488664	chr7	66384326	66385029	+	0	NA	Intergenic	L1Md_T|LINE|L1	-99443	NM_173010	22215	Mm.9002	NM_011668	ENSMUSG00000025326	Ube3a	4732496B02|5830462N02Rik|A130086L21Rik|Hpve6a|mKIAA4216	ubiquitin protein ligase E3A	protein-coding
unique_peak1-487-8-3-1.00522241794757-1.39487600375387	chr1	177983346	177983784	+	0	NA	intron (NM_176916, intron 4 of 9)	(TGAA)n|Simple_repeat|Simple_repeat	133105	NM_001290692	226720	Mm.11282	NM_001290692		Becn2	Gm104	beclin 2	protein-coding
unique_peak1-3882-8-1-2.00522241794757-2.05605744720049	chr2	13753156	13753656	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-38259	NM_145838	241230	Mm.330004	NM_145838	ENSMUSG00000003418	St8sia6	1700007J08Rik|AI314453|AI875066|ST8SiaVI|Siat8f	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6	protein-coding
common_peak1-18572-10-11--0.228547155712387-0.31137425193576	chr8	105606146	105606686	+	0	NA	Intergenic	L1Md_Gf|LINE|L1	265018	NR_036588	69794	Mm.396139	NR_036588		1600027J07Rik	-	RIKEN cDNA 1600027J07 gene	ncRNA
unique_peak2-38683-4-18--2.27138802729683-2.39353597935438	chr7	100733017	100733687	+	0	NA	Intergenic	Lx8|LINE|L1	504963	NM_021427	58238	Mm.113787	NM_021427		Fam181b	A830059I20Rik|AB041569	family with sequence similarity 181, member B	protein-coding
unique_peak2-33230-7-9--0.522837264589173-1.05908390183068	chr10	120432875	120433303	+	0	NA	Intergenic	MTEa|LTR|MaLR	-16703	NM_001081193	380664	Mm.339371	NM_001081193	ENSMUSG00000048661	Lemd3	AI316861|Man1	LEM domain containing 3	protein-coding
common_peak1-14657-56-103--0.464843892701849-1.26143771187977	chr3	57734852	57736631	+	0	NA	Intergenic	Intergenic	-84062	NM_019410	18645	Mm.271744	NM_019410	ENSMUSG00000027805	Pfn2	Pfn	profilin 2	protein-coding
common_peak1-8119-44-21-1.36246121593124-4.04946261034137	chr1	184276052	184277832	+	0	NA	Intergenic	Intergenic	-5205	NM_175127	67948	Mm.30737	NM_175127	ENSMUSG00000047539	Fbxo28	4833428J17Rik|5730505P19Rik|D1Ertd578e|Fbx28|mKIAA0483	F-box protein 28	protein-coding
unique_peak1-810-7-3-0.799090830298189-1.23214870625617	chr11	4257005	4257516	+	0	NA	intron (NM_029458, intron 10 of 10)	Lx7|LINE|L1	83825	NM_029458	75828	Mm.159592	NM_029458	ENSMUSG00000020419	Hormad2	4930529M09Rik	HORMA domain containing 2	protein-coding
unique_peak2-39068-10-17--0.813509656433543-0.699649909729472	chr8	72226061	72227153	+	0	NA	Intergenic	Intergenic	13778	NM_181274	66869	Mm.334581	NM_181274		Zfp869	1200003I07Rik	zinc finger protein 869	protein-coding
common_peak1-9042-47-42-0.50857667006445-1.06647553678992	chr11	62879181	62880275	+	0	NA	intron (NM_027660, intron 1 of 7)	MTD|LTR|MaLR	4567	NM_027660	71062	Mm.23534	NM_027660	ENSMUSG00000042189	Tekt3	4933407G07Rik	tektin 3	protein-coding
unique_peak1-6937-7-1-1.79909083029819-1.80617997398389	chr8	108826117	108826627	+	0	NA	intron (NM_021491, intron 1 of 8)	B2_Mm1a|SINE|B2	35516	NM_021491	58994	Mm.23298	NM_021491	ENSMUSG00000031906	Smpd3	4631433G07Rik|AI427456|AW537966|fro|nSMase2	sphingomyelin phosphodiesterase 3, neutral	protein-coding
unique_peak1-2232-10-7-0.356415345008769-1.12966497611638	chr15	76090990	76091504	+	0	NA	Intergenic	Intergenic	-7272	NM_028852	74281	Mm.159156	NM_028852	ENSMUSG00000049653	Spatc1	1700084J23Rik|speriolin	spermatogenesis and centriole associated 1	protein-coding
common_peak1-12418-32-37-0.0311645057760748-0.312460117298692	chr17	74489203	74490301	+	0	NA	Intergenic	Intergenic	-92496	NM_053188	94224	Mm.38933	NM_053188	ENSMUSG00000038541	Srd5a2	5ART2|S5AR 2	steroid 5 alpha-reductase 2	protein-coding
common_peak2-20693-23-43--0.737664114128217-1.21996307277154	chr10	91181117	91181917	+	0	NA	Intergenic	Lx9|LINE|L1	353413	NR_029812	723955		NR_029812	miRBase:MI0000715	Mir135a-2	Mirn135a-2	microRNA 135a-2	ncRNA
unique_peak1-595-8-1-2.00522241794757-2.05605744720049	chr10	17653304	17653780	+	0	NA	intron (NM_001033432, intron 1 of 3)	intron (NM_001033432, intron 1 of 3)	14331	NM_001033432	380629	Mm.276430	NM_001033432	ENSMUSG00000039879	Heca	Gm869|HDC|HDCL	headcase homolog (Drosophila)	protein-coding
common_peak1-14940-50-67--0.0465225247713867-0.302662697069732	chr3	102995032	102996305	+	0	NA	Intergenic	RMER6C|LTR|ERVK	20034	NM_026602	68183	Mm.104919	NM_026602	ENSMUSG00000005687	Bcas2	6430539P16Rik|AI132645|C76366|C80030	breast carcinoma amplified sequence 2	protein-coding
common_peak1-12403-18-39--1.00900894365901-1.65365064026544	chr17	71475249	71476101	+	0	NA	exon (NM_010867, exon 38 of 38)	exon (NM_010867, exon 38 of 38)	-57643	NM_022882	64898	Mm.227924	NM_022882	ENSMUSG00000024052	Lpin2	2610511G02Rik|AI481352|AW742896	lipin 2	protein-coding
common_peak1-7953-10-22--1.16714661104824-1.30248952876293	chr1	153333187	153333739	+	0	NA	intron (NM_011277, intron 1 of 6)	intron (NM_011277, intron 1 of 6)	14490	NM_011277	19821	Mm.474038	NM_011277	ENSMUSG00000026484	Rnf2	AI326319|AI450156|AU019207|Ring1B|dinG	ring finger protein 2	protein-coding
unique_peak1-2260-12-2-2.06381348436648-2.79529063155376	chr15	77856094	77856607	+	0	NA	intron (NM_007583, intron 1 of 3)	intron (NM_007583, intron 1 of 3)	-55096	NM_018749	55944	Mm.3955	NM_018749	ENSMUSG00000016554	Eif3d	66/67kDa|AA407891|Eif3s7|eIF3p66	eukaryotic translation initiation factor 3, subunit D	protein-coding
common_peak2-31068-23-28--0.136213490618491-0.317118655902079	chr8	22652866	22653755	+	0	NA	Intergenic	L1_Mus2|LINE|L1	13808	NM_001177521	100041890	Mm.423382	NM_001177521	ENSMUSG00000094818	Gm15308	ENSMUSG00000065957|OTTMUSG00000019860	predicted gene 15308	protein-coding
unique_peak1-4408-11-3-1.50869358425161-1.95434855131066	chr2	167416085	167416596	+	0	NA	Intergenic	Intergenic	41165	NM_023230	66589	Mm.278783	NM_023230	ENSMUSG00000078923	Ube2v1	0610011J09Rik|AI256840|CROC-1|CROC1|D7Bwg1382e|UEV-1	ubiquitin-conjugating enzyme E2 variant 1	protein-coding
common_peak1-17402-20-23--0.0968877161299631-0.305855887145851	chr7	4501196	4502064	+	0	NA	intron (NM_207270, intron 18 of 19)	intron (NM_207270, intron 18 of 19)	-3461	NM_016908	53420	Mm.358663	NM_016908	ENSMUSG00000004961	Syt5	SytV	synaptotagmin V	protein-coding
common_peak2-23733-13-30--1.17572427974911-1.59386218057211	chr15	96461233	96461960	+	0	NA	intron (NM_001166458, intron 1 of 15)	(TAA)n|Simple_repeat|Simple_repeat	10797	NM_134086	105727	Mm.103568	NM_134086	ENSMUSG00000023169	Slc38a1	AA408026|AA409865|AL022800|AU015942|NAT2	solute carrier family 38, member 1	protein-coding
common_peak1-14749-22-14-0.740393509478886-0.983972868822056	chr3	87908686	87909653	+	0	NA	intron (NM_001033484, intron 22 of 37)	intron (NM_001033484, intron 22 of 37)	23196	NM_001033484	404710	Mm.331133	NM_001033484	ENSMUSG00000028068	Iqgap3	AI593484|D030034H08	IQ motif containing GTPase activating protein 3	protein-coding
common_peak1-14857-19-32--0.641706792696767-0.800403172662453	chr3	95110857	95111489	+	0	NA	promoter-TSS (NM_023628)	promoter-TSS (NM_023628)	-75	NM_023628	71790	Mm.218844	NM_023628	ENSMUSG00000015702	Anxa9	1110003P15Rik|2310069F17Rik	annexin A9	protein-coding
common_peak1-17043-20-14-0.581184188982674-0.690311289528838	chr6	94284161	94285025	+	0	NA	Intergenic	Intergenic	-50682	NM_001286785	14924	Mm.217216	NM_010367	ENSMUSG00000045095	Magi1	AIP3|BAP1|Baiap1|Gukmi1|MAGI1c|Magi-1|TNRC19|WWP3|mKIAA4129	membrane associated guanylate kinase, WW and PDZ domain containing 1	protein-coding
common_peak2-30520-16-6-1.31090872021046-1.49151883326344	chr7	66228177	66228599	+	0	NA	Intergenic	Lx9|LINE|L1	-255732	NM_173010	22215	Mm.9002	NM_011668	ENSMUSG00000025326	Ube3a	4732496B02|5830462N02Rik|A130086L21Rik|Hpve6a|mKIAA4216	ubiquitin protein ligase E3A	protein-coding
unique_peak2-33220-3-4--0.73591118484664-0.864171920961574	chr10	118870012	118870350	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	19681	NR_040578	67081	Mm.72644	NR_040578		1700025F24Rik	-	RIKEN cDNA 1700025F24 gene	ncRNA
common_peak2-20845-9-7-0.18961340640422-1.05908390183068	chr11	57687842	57688303	+	0	NA	Intergenic	Intergenic	-42423	NM_008213	15110	Mm.4746	NM_008213	ENSMUSG00000037335	Hand1	Ehand1|Hxt|Th1|Thing1|bHLHa27|eHAND	heart and neural crest derivatives expressed transcript 1	protein-coding
common_peak2-19768-33-33-0.24387472127519-0.447010559430123	chr1	82282925	82284084	+	0	NA	exon (NM_010570, exon 1 of 2)	exon (NM_010570, exon 1 of 2)	4510	NM_010570	16367	Mm.4952	NM_010570	ENSMUSG00000055980	Irs1	G972R|IRS-1	insulin receptor substrate 1	protein-coding
common_peak1-13164-30-25-0.469235691350781-0.734130039933318	chr19	10881129	10882540	+	0	NA	intron (NM_001037801, intron 1 of 11)	B1F1|SINE|Alu	22714	NM_001037801	12511	Mm.290897	NM_009852	ENSMUSG00000024670	Cd6	-	CD6 antigen	protein-coding
common_peak2-32075-9-31--1.81038659359578-3.08022526292111	chr9	95826266	95827123	+	0	NA	intron (NM_019864, intron 34 of 46)	L1_Mus3|LINE|L1	-28485	NM_011916	24127	Mm.291179	NM_011916	ENSMUSG00000032410	Xrn1	Dhm2|exo|mXrn1	5'-3' exoribonuclease 1	protein-coding
unique_peak1-6132-8-0-3.00522241794757-2.70926996097583	chr6	134293858	134294268	+	0	NA	Intergenic	MIR3|SINE|MIR	-52284	NM_025778	66813	Mm.474472	NM_025778	ENSMUSG00000030200	Bcl2l14	4930452K23Rik|4933405K19Rik|9030625M01Rik|AI429211|Bclg	BCL2-like 14 (apoptosis facilitator)	protein-coding
common_peak2-25284-16-12-0.417823924126969-0.489164546851866	chr18	69415417	69415984	+	0	NA	Intergenic	L1M3|LINE|L1	-88446	NM_013685	21413	Mm.4269	NM_013685	ENSMUSG00000053477	Tcf4	5730422P05Rik|ASP-I2|E2-2|E2.2|ITF-2|ITF-2b|ITF2|ME2|MITF-2A|MITF-2B|SEF-2|SEF2|SEF2-1|TFE|Tcf-4|bHLHb19	transcription factor 4	protein-coding
unique_peak1-962-9-3-1.18961340640422-1.57096726280955	chr11	60252851	60253358	+	0	NA	intron (NM_025757, intron 5 of 5)	RLTR13D1|LTR|ERVK	-15015	NM_021354	13495	Mm.41803	NM_021354	ENSMUSG00000020537	Drg2	AI255295|AI461605	developmentally regulated GTP binding protein 2	protein-coding
unique_peak2-36528-11-12--0.191746133889479-0.310474156842889	chr2	163580586	163581120	+	0	NA	Intergenic	Intergenic	-4878	NM_001272052	11486	Mm.388	NM_007398	ENSMUSG00000017697	Ada	-	adenosine deaminase	protein-coding
common_peak2-23379-108-179--0.121676134921605-0.424787600162468	chr15	57693753	57696344	+	0	NA	Intergenic	Intergenic	28925	NM_024207	67819	Mm.289387	NM_024207	ENSMUSG00000022365	Derl1	1110021N07Rik|AI195141|AW551338|Derlin-1	Der1-like domain family, member 1	protein-coding
unique_peak2-33006-7-15--1.20090916970181-0.947446088118041	chr10	62332556	62333302	+	0	NA	intron (NM_001253857, intron 1 of 11)	intron (NM_001253857, intron 1 of 11)	9833	NM_027384	52463	Mm.17774	NM_027384	ENSMUSG00000047146	Tet1	2510010B09Rik|AA517754|BB001228|Cxxc6|D10Ertd17e|LCX|mKIAA1676	tet methylcytosine dioxygenase 1	protein-coding
common_peak1-10768-46-69--0.231287073696165-0.437489091603667	chr14	70599120	70600250	+	0	NA	intron (NM_001271407, intron 4 of 20)	B3|SINE|B2	4745	NM_001271408	20410	Mm.5068	NM_011366	ENSMUSG00000022091	Sorbs3	SCAM-1|SH3P3|Sh3d4|vinexin-g	sorbin and SH3 domain containing 3	protein-coding
common_peak1-18997-16-24--0.525592547506663-0.561823156887258	chr9	58582265	58583027	+	0	NA	intron (NM_028598, intron 1 of 5)	L1_Mus3|LINE|L1	6720	NM_028598	73673	Mm.205196	NM_028598	ENSMUSG00000074269	Rec114	2410076I21Rik|4930527A11Rik	REC114 meiotic recombination protein	protein-coding
common_peak2-24623-282-405-0.374605656129976-3.72558879200791	chr17	34119614	34122832	+	0	NA	non-coding (NR_033305, exon 1 of 1)	non-coding (NR_033305, exon 1 of 1)	2786	NR_033305	433100	Mm.380381	NM_001013793		AA388235	-	expressed sequence AA388235	ncRNA
common_peak2-23822-35-94--1.13848534986844-4.52458352949558	chr15	101315881	101317776	+	0	NA	intron (NM_001201323, intron 7 of 8)	ORR1E|LTR|MaLR	5115	NM_001201323	100126226	Mm.347934	NM_001201323	ENSMUSG00000067613	5430421N21Rik	-	RIKEN cDNA 5430421N21 gene	protein-coding
common_peak2-25188-10-6-0.549060422951165-1.21398586181642	chr18	57746553	57746937	+	0	NA	intron (NM_029290, intron 3 of 6)	intron (NM_029290, intron 3 of 6)	-34694	NR_015494	75084	Mm.243841	NR_015494	ENSMUSG00000086607	4930511M06Rik	-	RIKEN cDNA 4930511M06 gene	ncRNA
unique_peak2-36643-3-7--1.41398308995928-1.23214870625617	chr3	9172482	9172880	+	0	NA	Intergenic	GA-rich|Low_complexity|Low_complexity	-77886	NM_177660	229055	Mm.103262	NM_177660	ENSMUSG00000069114	Zbtb10	4832414A18|AU021107|RINZF	zinc finger and BTB domain containing 10	protein-coding
common_peak2-26018-137-130-0.749611698018312-5.38333853623504	chr19	57609825	57611583	+	0	NA	Intergenic	Intergenic	27148	NR_040307	78073	Mm.12411	NR_040306		6720468P15Rik	-	RIKEN cDNA 6720468P15 gene	ncRNA
common_peak1-8016-31-43--0.234192947824174-0.398838069828027	chr1	168429821	168431335	+	0	NA	Intergenic	Intergenic	-2859	NM_001164306	226601	Mm.475593	NM_001164306	ENSMUSG00000086056	Gm4846	EG226601|Fmo13	predicted gene 4846	protein-coding
common_peak1-12429-16-11-0.533301141546906-0.58239619684445	chr17	78216261	78216990	+	0	NA	Intergenic	Lx7|LINE|L1	-382963	NM_015800	50766	Mm.311912	NM_015800	ENSMUSG00000024074	Crim1	AU015004	cysteine rich transmembrane BMP regulator 1 (chordin like)	protein-coding
common_peak1-11356-34-39-0.0601404321139034-0.325162986021101	chr15	89195792	89196892	+	0	NA	intron (NM_001271600, intron 9 of 19)	B3A|SINE|B2	7907	NM_001111288	100126824	Mm.287977	NM_001111288	ENSMUSG00000091780	Sco2	-	SCO cytochrome oxidase deficient homolog 2 (yeast)	protein-coding
common_peak2-28231-26-63--1.07210090784154-2.89999763406377	chr4	120148182	120149638	+	0	NA	intron (NM_013883, intron 7 of 16)	intron (NM_013883, intron 7 of 16)	-55926	NM_177570	194219	Mm.29788	NM_177570	ENSMUSG00000047518	Slfnl1	4933406A14Rik	schlafen like 1	protein-coding
common_peak2-31981-14-11-0.314253659636488-0.435191258261915	chr9	69457351	69457963	+	0	NA	Intergenic	Intergenic	151090	NM_022378	64290	Mm.440890	NM_022378	ENSMUSG00000059246	Foxb1	C43|Fkh5|Foxb1a|Foxb1b|Hfh-e5.1|Mf3|Twh	forkhead box B1	protein-coding
unique_peak1-7265-8-1-2.00522241794757-2.05605744720049	chr9	96118739	96119251	+	0	NA	intron (NM_178667, intron 2 of 13)	L2c|LINE|L2	22301	NM_001184706	211586	Mm.17977	NM_178667	ENSMUSG00000032411	Tfdp2	1110029I05Rik|A330080J22Rik|DP-3|DP3	transcription factor Dp 2	protein-coding
common_peak2-25847-10-12--0.344024373132323-0.340565874754526	chr19	41912019	41912475	+	0	NA	Intergenic	Intergenic	7787	NM_008043	14296	Mm.4573	NM_008043		Frat1	AW060382	frequently rearranged in advanced T cell lymphomas	protein-coding
common_peak1-12321-16-20--0.274053780510699-0.353907621462756	chr17	47687499	47688391	+	0	NA	intron (NM_001081635, intron 1 of 6)	MT2B|LTR|ERVL	-42471	NM_007632	12445	Mm.27291	NM_007632	ENSMUSG00000034165	Ccnd3	9230106B05Rik|AA682053|AL024085|AW146355|C78795	cyclin D3	protein-coding
unique_peak2-37917-2-11--2.50241675698448-2.32232533660526	chr5	144647917	144648663	+	0	NA	intron (NM_013557, intron 10 of 14)	MTE2a|LTR|MaLR	7646	NM_025732	66729	Mm.439817	NM_025732	ENSMUSG00000029607	Ankrd61	4921520G13Rik	ankyrin repeat domain 61	protein-coding
unique_peak2-35757-2-4--1.23938235115068-0.931118710592187	chr18	39657027	39657267	+	0	NA	Intergenic	MER63C|DNA|AcHobo	-10248	NM_008173	14815	Mm.129481	NM_008173	ENSMUSG00000024431	Nr3c1	GR|Grl-1|Grl1	nuclear receptor subfamily 3, group C, member 1	protein-coding
common_peak2-27408-27-43--0.467885667742062-0.652627812244285	chr3	88492314	88493095	+	0	NA	intron (NM_028814, intron 2 of 13)	intron (NM_028814, intron 2 of 13)	2988	NM_028814	74200	Mm.251800	NM_028814	ENSMUSG00000028060	2810403A07Rik	A430106P18Rik|AI256352|AI451678|Blom7|Kiaa0907	RIKEN cDNA 2810403A07 gene	protein-coding
common_peak2-22093-6-4-0.24347001549294-0.989110657569874	chr12	79906719	79906999	+	0	NA	intron (NM_019579, intron 3 of 14)	intron (NM_019579, intron 3 of 14)	55766	NM_023721	73834	Mm.491124	NM_023721	ENSMUSG00000021114	Atp6v1d	1110004P10Rik|Atp6m|VATD|Vma8	ATPase, H+ transporting, lysosomal V1 subunit D	protein-coding
common_peak1-7883-20-11-0.903112283870037-1.11267835143409	chr1	134096530	134097371	+	0	NA	intron (NM_001033250, intron 1 of 3)	intron (NM_001033250, intron 1 of 3)	2285	NR_029777	723818		NR_029777	miRBase:MI0000646	Mir135b	Mirn135b	microRNA 135b	ncRNA
common_peak2-32249-8-9--0.316705676939792-1.03275496310833	chrX	6414635	6415171	+	0	NA	intron (NM_177914, intron 1 of 27)	intron (NM_177914, intron 1 of 27)	58471	NM_177914	331374	Mm.392752	NM_177914	ENSMUSG00000062393	Dgkk	Gm360	diacylglycerol kinase kappa	protein-coding
unique_peak2-32789-4-8--1.19338551529556-1.21878474469819	chr1	180943065	180943475	+	0	NA	intron (NM_027188, intron 10 of 11)	intron (NM_027188, intron 10 of 11)	484014	NM_001161665	269152	Mm.129727	NM_177724	ENSMUSG00000026494	Kif26b	4832420M10|BC056349|D230039L06Rik	kinesin family member 26B	protein-coding
unique_peak2-32527-4-30--2.97765682424012-5.18764427570439	chr1	62705970	62707374	+	0	NA	Intergenic	B3|SINE|B2	-43219	NM_001077406	18187	Mm.266341	NM_010939	ENSMUSG00000025969	Nrp2	1110048P06Rik|Np-2|Np2|Npn-2|Npn2	neuropilin 2	protein-coding
common_peak2-27253-41-60--0.229588632714226-0.425219862997755	chr3	54734468	54736224	+	0	NA	Intergenic	Charlie1a|DNA|MER1_type	-15537	NM_177854	329641	Mm.51187	NM_177854	ENSMUSG00000056306	Sertm1	6030405A18Rik	serine rich and transmembrane domain containing 1	protein-coding
common_peak2-23729-22-35--0.522640896354908-0.664636481544818	chr15	95803913	95805258	+	0	NA	3' UTR (NM_175344, exon 20 of 20)	3' UTR (NM_175344, exon 20 of 20)	105398	NR_003627	402773	Mm.210567	NM_001033483		D030018L15Rik	-	nuclear receptor coactivator 2 pseudogene	pseudo
common_peak2-25992-12-16--0.4386868561627-0.368541233333383	chr19	55244371	55245168	+	0	NA	Intergenic	Intergenic	-10606	NM_009348	21684	Mm.42139	NM_009348	ENSMUSG00000024979	Tectb	Tctnb	tectorin beta	protein-coding
unique_peak1-5865-10-5-0.771452844287613-1.33892459842472	chr6	84569877	84570415	+	0	NA	3' UTR (NM_177077, exon 22 of 22)	3' UTR (NM_177077, exon 22 of 22)	-26244	NM_001177713	232174	Mm.255246	NM_175475	ENSMUSG00000063415	Cyp26b1	CP26|P450RAI-2	cytochrome P450, family 26, subfamily b, polypeptide 1	protein-coding
common_peak1-14719-15-37--1.23576276288793-2.15838218998677	chr3	79567089	79567871	+	0	NA	Intergenic	MusHAL1|LINE|L1	-25764	NM_212452	381489	Mm.331086	NM_212452		Rxfp1	Gm1018|Lgr7	relaxin/insulin-like family peptide receptor 1	protein-coding
unique_peak1-2395-10-1-2.35641534500877-2.57096726280955	chr15	97770209	97770768	+	0	NA	Intergenic	Intergenic	-24172	NM_201359	380967	Mm.196630	NM_201359	ENSMUSG00000052369	Tmem106c	AI046681|BC046621|D15Ertd405e	transmembrane protein 106C	protein-coding
common_peak1-13035-127-160-0.32046963321344-1.31436330888478	chr19	5609451	5610826	+	0	NA	promoter-TSS (NM_178637)	promoter-TSS (NM_178637)	-44	NM_178637	81601	Mm.228930	NM_178637	ENSMUSG00000024926	Kat5	AI839539|CPLA2|Htatip|Htatip1|PLIP|Tip55|Tip60	K(lysine) acetyltransferase 5	protein-coding
common_peak1-19228-39-46-0.061172395241516-0.321605260051241	chr9	107770304	107771344	+	0	NA	intron (NM_029169, intron 1 of 20)	AT_rich|Low_complexity|Low_complexity	4326	NM_011251	19654	Mm.139926	NM_011251	ENSMUSG00000032582	Rbm6	4930506F14Rik|Def-3|NY-LU-12|g16|mKIAA4015	RNA binding motif protein 6	protein-coding
common_peak1-14806-11-5-0.923731083530457-1.477227296591	chr3	90253853	90254475	+	0	NA	TTS (NM_008727)	TTS (NM_008727)	15624	NM_008727	18160	Mm.4627	NM_008727	ENSMUSG00000027931	Npr1	AI893888|GC-A|NPR-A|NPRA|Pndr	natriuretic peptide receptor 1	protein-coding
common_peak2-21680-13-10-0.319040412000471-0.446472590016315	chr11	103953556	103954002	+	0	NA	Intergenic	Intergenic	-40417	NM_007762	12921	Mm.1892	NM_007762	ENSMUSG00000018634	Crhr1	CRFR1|Crhr	corticotropin releasing hormone receptor 1	protein-coding
unique_peak2-37835-8-11--0.579740082773585-1.14218153353838	chr5	134245734	134246211	+	0	NA	Intergenic	Intergenic	-329646	NM_030719	80909	Mm.45218	NM_030719		Gatsl2	7530428J21Rik|AW742413|Gats|Gatsl1	GATS protein-like 2	protein-coding
common_peak1-18680-13-11-0.193509529916613-0.379391706698377	chr8	119604446	119605260	+	0	NA	intron (NM_029686, intron 2 of 42)	intron (NM_029686, intron 2 of 42)	1496	NM_029686	76645	Mm.159753	NM_029686	ENSMUSG00000034416	Pkd1l2	1700126L06Rik	polycystic kidney disease 1 like 2	protein-coding
common_peak1-11794-56-57-0.377614830311671-0.835692031846851	chr16	55838146	55839425	+	0	NA	promoter-TSS (NM_030612)	promoter-TSS (NM_030612)	-31	NM_001159395	80859	Mm.247272	NM_030612	ENSMUSG00000035356	Nfkbiz	AA408868|INAP|Mail	nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta	protein-coding
unique_peak1-1761-12-3-1.64877598508764-2.36932189928148	chr13	109643942	109644673	+	0	NA	intron (NM_011056, intron 1 of 16)	intron (NM_011056, intron 1 of 16)	199936	NM_011056	238871	Mm.434429	NM_011056		Pde4d	9630011N22Rik|Dpde3	phosphodiesterase 4D, cAMP specific	protein-coding
common_peak2-30448-11-16--0.578769256998726-0.503257505534083	chr7	45339641	45340129	+	0	NA	Intergenic	Intergenic	1180019	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak1-11890-83-127--0.0857773748938735-0.332554445126597	chr16	97851027	97852366	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-18894	NM_015775	50528	Mm.276145	NM_015775	ENSMUSG00000000385	Tmprss2	D16Ertd61e	transmembrane protease, serine 2	protein-coding
unique_peak2-37249-2-9--2.23938235115068-1.87199725847353	chr4	100665124	100665673	+	0	NA	exon (NM_198037, exon 24 of 27)	exon (NM_198037, exon 24 of 27)	-76245	NM_183024	242570	Mm.185636	NM_183024	ENSMUSG00000035275	Raver2	A430091O22Rik	ribonucleoprotein, PTB-binding 2	protein-coding
unique_peak2-33908-5-7--0.704380336005853-1.01466476204226	chr12	59105755	59106161	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-206833	NM_009216	20605	Mm.278336	NM_009216		Sstr1	SRIF-2|SS-1-R|SS1-R|SS1R|Smstr-1|Smstr1|sst1	somatostatin receptor 1	protein-coding
common_peak2-21929-23-53--1.03311999765439-2.34578757725673	chr12	21416565	21417688	+	0	NA	intron (NM_011739, intron 1 of 4)	B1_Mus2|SINE|Alu	6171	NM_011739	22630	Mm.289630	NM_011739	ENSMUSG00000076432	Ywhaq	2700028P07Rik|AA409740|AU021156|R74690	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide	protein-coding
unique_peak1-3103-33-9-2.00940946763817-4.90247409987431	chr18	25712236	25713584	+	0	NA	intron (NM_001146294, intron 2 of 12)	intron (NM_001146294, intron 2 of 12)	199574	NM_133195	108013	Mm.266435	NM_133195	ENSMUSG00000024268	Celf4	A230070D14Rik|BRUNOL-4|Brul4|Brunol4|C130060B05Rik	CUGBP, Elav-like family member 4	protein-coding
common_peak2-20864-15-21--0.447266868081641-0.448200956659578	chr11	95403888	95404655	+	0	NA	Intergenic	Intergenic	-28392	NM_130858	104079	Mm.22970	NM_130858	ENSMUSG00000046719	Nxph3	-	neurexophilin 3	protein-coding
common_peak2-27743-28-46--0.501629731856175-0.767679714496325	chr3	126831680	126832871	+	0	NA	Intergenic	Intergenic	-31948	NR_105030	100862268	Mm.444603	NR_105029	ENSMUSG00000097456	LOC100862268	-	uncharacterized LOC100862268	ncRNA
common_peak2-22820-31-40--0.13231333380496-0.326417267106726	chr14	18270185	18271006	+	0	NA	Intergenic	ORR1A1-int|LTR|MaLR	-222879	NM_001113417	21834	Mm.32563	NM_009380	ENSMUSG00000021779	Thrb	Nr1a2|T3R[b]|T3Rbeta|Thrb1|Thrb2|c-erbAbeta	thyroid hormone receptor beta	protein-coding
unique_peak2-38814-6-5--0.0195643903408542-0.947717972411649	chr7	134225165	134225510	+	0	NA	Intergenic	RLTR21|LTR|ERVK	-9613	NM_178901	101602	Mm.490357	NM_178901	ENSMUSG00000045165	AI467606	-	expressed sequence AI467606	protein-coding
unique_peak1-3464-7-1-1.79909083029819-1.80617997398389	chr19	9908573	9908948	+	0	NA	Intergenic	IAPEY3-int|LTR|ERVK	65263	NM_016692	16319	Mm.29755	NM_016692	ENSMUSG00000024660	Incenp	2700067E22Rik|AU019509|C130081E20|C77457	inner centromere protein	protein-coding
common_peak2-24102-20-16-0.400611943340854-0.507611860039817	chr16	32640405	32641174	+	0	NA	Intergenic	(CTCTG)n|Simple_repeat|Simple_repeat	-3940	NM_001110147	51789	Mm.251115	NM_016788	ENSMUSG00000022791	Tnk2	Ack|Ack-1|Ack1|Cdgip|Pyk1	tyrosine kinase, non-receptor, 2	protein-coding
unique_peak1-4502-14-6-1.09186123830004-1.16633110333236	chr3	19429877	19430319	+	0	NA	intron (NM_025489, intron 1 of 4)	intron (NM_025489, intron 1 of 4)	-1149	NM_001163537	66326	Mm.45615	NM_025489	ENSMUSG00000027606	Dnajc5b	1700008A05Rik	DnaJ (Hsp40) homolog, subfamily C, member 5 beta	protein-coding
unique_peak1-5913-11-1-2.50869358425161-2.83420869758413	chr6	88905466	88906115	+	0	NA	Intergenic	L1M4b|LINE|L1	53545	NM_011906	24100	Mm.284480	NM_011906	ENSMUSG00000002871	Tpra1	40kDa|Gpr175|Tpra40	transmembrane protein, adipocyte asscociated 1	protein-coding
unique_peak2-37960-6-5--0.0195643903408542-0.947717972411649	chr6	147979886	147980315	+	0	NA	Intergenic	L1MCa|LINE|L1	-15838	NM_178797	330450	Mm.475174	NM_178797	ENSMUSG00000030303	Far2	A230046P18|AW048109|BC055759|Mlstd1	fatty acyl CoA reductase 2	protein-coding
common_peak2-24950-26-46--0.626689759519175-1.0379745517287	chr18	44660821	44662881	+	0	NA	intron (NM_001085373, intron 6 of 18)	intron (NM_001085373, intron 6 of 18)	121697	NM_027490	70640	Mm.87629	NM_027490	ENSMUSG00000024472	Dcp2	2410015D23Rik|5730537H01Rik|AL118268	DCP2 decapping enzyme homolog (S. cerevisiae)	protein-coding
common_peak1-14637-20-12-0.787635066450101-0.949240599462708	chr3	57181205	57182024	+	0	NA	Intergenic	MERVL-int|LTR|ERVL	-47718	NM_145539	229302	Mm.26618	NM_145539	ENSMUSG00000027801	Tm4sf4	Iltmp	transmembrane 4 superfamily member 4	protein-coding
unique_peak1-839-9-0-3.18961340640422-3.01029995663981	chr11	8828578	8829034	+	0	NA	Intergenic	RLTR4_Mm|LTR|ERV1	82334	NM_008316	15574	Mm.42201	NM_008316	ENSMUSG00000020413	Hus1	mHus1	Hus1 homolog (S. pombe)	protein-coding
common_peak1-9100-12-2-2.06381348436648-2.79529063155376	chr11	70577666	70578331	+	0	NA	promoter-TSS (NM_177565)	promoter-TSS (NM_177565)	49	NM_177565	193043	Mm.40966	NM_177565	ENSMUSG00000043602	Zfp3	AI854635|B230309J24|Fnp-1|Zfp-3	zinc finger protein 3	protein-coding
unique_peak2-34823-4-4--0.345388608740609-0.864171920961574	chr15	74996346	74996718	+	0	NA	Intergenic	RMER10B|LTR|ERVL	-54153	NM_001099217	100041546	Mm.482110	NM_001099217	ENSMUSG00000022584	Ly6c2	Ly-6C.2|Ly-6C2	lymphocyte antigen 6 complex, locus C2	protein-coding
unique_peak2-38772-8-11--0.579740082773585-1.14218153353838	chr7	127243929	127244519	+	0	NA	Intergenic	ORR1A1-int|LTR|MaLR	-1716	NM_145586	233806	Mm.257952	NM_145586	ENSMUSG00000030917	Tmem159	8430420C20Rik	transmembrane protein 159	protein-coding
common_peak2-25580-68-71-0.400035777855984-1.05715192273056	chr19	7205470	7207164	+	0	NA	intron (NM_134147, intron 3 of 10)	MIRc|SINE|MIR	-26098	NM_201411	396184	Mm.386930	NM_201411	ENSMUSG00000047787	Flrt1	AW742165|D630040I23Rik	fibronectin leucine rich transmembrane protein 1	protein-coding
unique_peak2-34160-7-8--0.370834171144123-1.00793137938329	chr13	30108739	30109152	+	0	NA	Intergenic	MLT1A0|LTR|MaLR	-31013	NM_010093	13557	Mm.268356	NM_010093	ENSMUSG00000016477	E2f3	E2F3b|E2f3a	E2F transcription factor 3	protein-coding
common_peak2-26483-20-42--0.938189970110905-1.68120055799038	chr2	80315233	80316304	+	0	NA	Intergenic	(TATAA)n|Simple_repeat|Simple_repeat	-28215	NM_011356	20378	Mm.427436	NM_011356	ENSMUSG00000027004	Frzb	Frp|Sfrp3|frezzled|fritz|frzb-1	frizzled-related protein	protein-coding
common_peak2-24946-15-33--1.07529809069468-1.60877160026698	chr18	36454035	36454766	+	0	NA	Intergenic	Intergenic	-5355	NM_001267796	109169	Mm.426423	NM_001267796		Igip	6330403M23Rik	IgA inducing protein	protein-coding
unique_peak2-37889-1-9--2.94898510510411-2.31132995230379	chr5	140189621	140190019	+	0	NA	intron (NM_174850, intron 6 of 16)	intron (NM_174850, intron 6 of 16)	22467	NM_174850	231830	Mm.240510	NM_174850	ENSMUSG00000036718	Micall2	A930021H16Rik|JRAB|MICAL-L2|mFLJ00139	MICAL-like 2	protein-coding
common_peak2-20940-46-36-0.688542577619851-1.61783625824857	chr11	8675050	8676031	+	0	NA	Intergenic	Intergenic	-111002	NM_001083587	319939	Mm.337820	NM_001083587	ENSMUSG00000020422	Tns3	BC023928|F830010I22Rik|TEM6|Tens1	tensin 3	protein-coding
common_peak1-16321-21-24--0.0743669245084888-0.301029995663979	chr5	115559351	115560216	+	0	NA	TTS (NM_007383)	TTS (NM_007383)	494	NM_001271590	100502825	Mm.361657	NM_001271590		Gm13826	OTTMUSG00000014624	predicted gene 13826	protein-coding
unique_peak2-38942-10-35--1.81350965643354-3.49519823291231	chr8	25753725	25754946	+	0	NA	intron (NM_010084, intron 12 of 19)	Lx9|LINE|L1	30892	NM_010084	13524	Mm.89943	NM_010084	ENSMUSG00000031552	Adam18	Adam27|Dtgn3|Tmdc3|tMDCIII	a disintegrin and metallopeptidase domain 18	protein-coding
common_peak2-23991-13-18--0.469455482805817-0.409888142029227	chr16	18498136	18498767	+	0	NA	promoter-TSS (NR_104347)	promoter-TSS (NR_104347)	-355	NM_001081682	13972	Mm.236139	NM_023120	ENSMUSG00000000884	Gnb1l	ESTM55|Gm16314|Me49f07|OTTMUSG00000033458|Wdr14|Wdvcf	guanine nucleotide binding protein (G protein), beta polypeptide 1-like	protein-coding
unique_peak1-4404-6-1-1.5653981103803-1.56314192529759	chr2	166794640	166795134	+	0	NA	intron (NM_011490, intron 1 of 11)	intron (NM_011490, intron 1 of 11)	-4670	NR_111895	20853	Mm.73276	NM_011490	ENSMUSG00000039536	Stau1	5830401L18Rik|AW549911|C85792|Stau	staufen (RNA binding protein) homolog 1 (Drosophila)	protein-coding
unique_peak2-37986-3-6--1.22133801201688-1.08602067057793	chr6	17247227	17247569	+	0	NA	Intergenic	URR1B|DNA|MER1_type	-8937	NM_007616	12389	Mm.28278	NM_007616	ENSMUSG00000007655	Cav1	Cav|Cav-1	caveolin 1, caveolae protein	protein-coding
common_peak2-27296-8-6-0.197867495889966-1.03789460276074	chr3	59279206	59279566	+	0	NA	Intergenic	Intergenic	-131208	NM_001162884	242050	Mm.228086	NM_001162884	ENSMUSG00000036334	Igsf10	6530405F15Rik|9030224D03|AA409708|AA536958|AI414626|Adlican2|CMF608	immunoglobulin superfamily, member 10	protein-coding
common_peak2-20718-44-64--0.200474978459919-0.389014771016025	chr10	95515064	95516099	+	0	NA	Intergenic	Intergenic	112284	NM_001001932	216238	Mm.210035	NM_001001932	ENSMUSG00000036499	Eea1	A430109M19Rik|B230358H09Rik|ZFYVE2	early endosome antigen 1	protein-coding
common_peak1-12428-17-13-0.410941416147434-0.546772548767014	chr17	75306967	75307601	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-97585	NM_019919	268977	Mm.269747	NM_019919	ENSMUSG00000001870	Ltbp1	9430031G15Rik|9830146M04|Ltbp-1|Tgfb|b2b1000Clo	latent transforming growth factor beta binding protein 1	protein-coding
unique_peak1-1252-8-1-2.00522241794757-2.05605744720049	chr11	115843726	115844206	+	0	NA	intron (NM_001005608, intron 7 of 39)	intron (NM_001005608, intron 7 of 39)	7927	NM_133663	192897	Mm.213873	NM_133663	ENSMUSG00000020758	Itgb4	AA407042|C230078O20|CD104	integrin beta 4	protein-coding
common_peak1-15614-20-40--0.869477220026891-1.45230360914611	chr4	132921823	132922610	+	0	NA	Intergenic	Intergenic	-3471	NM_016981	20544	Mm.4312	NM_016981	ENSMUSG00000028854	Slc9a1	AW554487|Apnh|Nhe1|swe	solute carrier family 9 (sodium/hydrogen exchanger), member 1	protein-coding
common_peak1-14904-33-54--0.450022150999131-0.755494033265326	chr3	96629770	96630587	+	0	NA	intron (NM_001163497, intron 1 of 3)	intron (NM_001163497, intron 1 of 3)	3096	NM_001163497	54215	Mm.34693	NM_018767	ENSMUSG00000038304	Cd160	AU045688|By55	CD160 antigen	protein-coding
common_peak1-9253-17-14-0.311405742596519-0.466170754204149	chr11	86683990	86684593	+	0	NA	Intergenic	Intergenic	-63129	NM_026191	67487	Mm.260627	NM_026191	ENSMUSG00000018425	Dhx40	2410016C14Rik|ARG147|DDX40|PAD	DEAH (Asp-Glu-Ala-His) box polypeptide 40	protein-coding
common_peak1-15716-20-29--0.418815811017326-0.51032171069054	chr4	141286458	141287080	+	0	NA	Intergenic	RSINE1|SINE|B4	-7435	NM_001017966	68817	Mm.393721	NM_001017966		Ddi2	1110056G13Rik|1700027M01Rik|9130022E05Rik|AI604911|AU040698	DNA-damage inducible protein 2	protein-coding
common_peak1-9690-21-20-0.177171842487475-0.380101753845079	chr12	17220658	17221703	+	0	NA	Intergenic	B3A|SINE|B2	-37486	NM_201531	382571	Mm.40173	NM_201531	ENSMUSG00000051726	Kcnf1	Gm1182|Kv5.1	potassium voltage-gated channel, subfamily F, member 1	protein-coding
common_peak1-19079-10-10--0.103016273628528-0.301029995663987	chr9	70656605	70657187	+	0	NA	intron (NM_008280, intron 6 of 8)	intron (NM_008280, intron 6 of 8)	125719	NM_008280	15450	Mm.390187	NM_008280	ENSMUSG00000032207	Lipc	AI256194|HL|Hpl	lipase, hepatic	protein-coding
common_peak1-17011-33-53--0.423549939637939-0.696926118858569	chr6	90735980	90737256	+	0	NA	intron (NM_001134384, intron 1 of 13)	ID_B1|SINE|B4	23499	NM_001134384	232227	Mm.196943	NM_182784	ENSMUSG00000034312	Iqsec1	AW561907|BC026481|BRAG2|D6Ertd349e|cI-43	IQ motif and Sec7 domain 1	protein-coding
common_peak1-9272-112-176--0.0343552497627151-0.306629850211599	chr11	87461680	87462656	+	0	NA	intron (NM_001045527, intron 5 of 5)	MTC|LTR|MaLR	-14421	NM_172448	207742	Mm.440230	NM_172448	ENSMUSG00000034177	Rnf43	4732452J19Rik	ring finger protein 43	protein-coding
common_peak1-9580-94-65-1.08519544849086-6.39993076708937	chr11	118408564	118411712	+	0	NA	intron (NM_001285436, intron 3 of 13)	intron (NM_001285436, intron 3 of 13)	71864	NM_172573	217364	Mm.473963	NM_172573	ENSMUSG00000033857	Engase	C130099A03|D230014K01Rik	endo-beta-N-acetylglucosaminidase	protein-coding
common_peak1-12394-45-58--0.0222850240169699-0.301029995663982	chr17	70750742	70752020	+	0	NA	Intergenic	Intergenic	-22751	NM_177639	224997	Mm.311840	NM_027712	ENSMUSG00000003279	Dlgap1	4933422O14Rik|9630002F18|AI845682|AI848168|BB075781|D17Bwg0511e|GKAP/SAPAP|GKPA/SAPAP|Gkap|Sapap1|mKIAA4162	discs, large (Drosophila) homolog-associated protein 1	protein-coding
common_peak1-18481-27-33--0.0959168903551033-0.304370854244436	chr8	84969004	84970484	+	0	NA	Intergenic	Intergenic	-43259	NM_008357	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak1-16091-9-8-0.0196884049619079-1.03275496310833	chr5	64751545	64751960	+	0	NA	Intergenic	Intergenic	107429	NR_040681	69999	Mm.261413	NR_040681		1700027F09Rik	-	RIKEN cDNA 1700027F09 gene	ncRNA
unique_peak2-32819-6-7--0.434601889619698-0.97990265578305	chr1	186478344	186478743	+	0	NA	Intergenic	Intergenic	-57833	NR_040627	74971	Mm.410816	NR_040627	ENSMUSG00000092578	4930488B22Rik	-	RIKEN cDNA 4930488B22 gene	ncRNA
unique_peak1-2568-13-2-2.19350952991661-3.03832868024006	chr16	25440712	25441258	+	0	NA	Intergenic	Intergenic	154082	NM_175165	71338	Mm.126851	NM_175165	ENSMUSG00000048399	Tprg	5430420C16Rik|Tprg1	transformation related protein 63 regulated	protein-coding
common_peak1-8132-41-54--0.0802110086759997-0.30922471743021	chr1	189727475	189728081	+	0	NA	intron (NM_001243792, intron 2 of 7)	intron (NM_001243792, intron 2 of 7)	-93928	NM_011935	26381	Mm.89989	NM_011935	ENSMUSG00000026610	Esrrg	ERR3|Errg|NR3B3|mKIAA0832	estrogen-related receptor gamma	protein-coding
unique_peak1-6635-9-3-1.18961340640422-1.57096726280955	chr8	10928409	10928930	+	0	NA	promoter-TSS (NR_030715)	promoter-TSS (NR_030715)	-212	NR_030715	665306	Mm.358758	NR_030715	ENSMUSG00000038917	3930402G23Rik	-	RIKEN cDNA 3930402G23 gene	ncRNA
unique_peak2-33163-3-6--1.22133801201688-1.08602067057793	chr10	93452988	93453412	+	0	NA	intron (NM_172538, intron 6 of 11)	intron (NM_172538, intron 6 of 11)	-26592	NR_029764	723908		NR_029764	miRBase:MI0000609	Mir331	Mirn331|mmu-mir-331	microRNA 331	ncRNA
common_peak1-13109-74-40-1.35833457236052-6.8592950983319	chr19	8818616	8821006	+	0	NA	intron (NM_019829, intron 4 of 9)	intron (NM_019829, intron 4 of 9)	2350	NR_105958	102465599		NR_105958		Mir6992	mmu-mir-6992	microRNA mir-6992	ncRNA
common_peak1-10431-11-22--1.0148683718054-1.11267835143409	chr13	101428698	101429348	+	0	NA	intron (NM_027592, intron 2 of 4)	intron (NM_027592, intron 2 of 4)	7461	NM_001015889	108143	Mm.301148	NM_027139	ENSMUSG00000052293	Taf9	2310012M09Rik|AA673500|AU045423|TAFII31|TAFII32|Taf2g	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor	protein-coding
common_peak2-24933-27-18-0.743618437451651-1.1637339601586	chr17	88626590	88627454	+	0	NA	Intergenic	MYSERV16_I-int|LTR|ERVK	102170	NM_001190356	225058	Mm.312053	NM_001190356		Gm4832	EG225058	predicted gene 4832	protein-coding
common_peak2-28290-32-36-0.0696386535907099-0.327094617740873	chr4	130162962	130164302	+	0	NA	intron (NM_025998, intron 3 of 6)	ORR1D1|LTR|MaLR	37927	NM_025998	67149	Mm.423029	NM_025998		Nkain1	2610200G18Rik|2810426C15Rik	Na+/K+ transporting ATPase interacting 1	protein-coding
unique_peak1-3640-15-8-0.842239749113344-0.891319708951327	chr19	38077636	38078328	+	0	NA	intron (NM_001099634, intron 3 of 52)	intron (NM_001099634, intron 3 of 52)	40085	NM_001099634	226101	Mm.34674	NM_177035	ENSMUSG00000048612	Myof	2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3	myoferlin	protein-coding
common_peak2-22830-32-76--0.987694521475241-2.93258054373007	chr14	20545609	20546840	+	0	NA	Intergenic	RSINE1|SINE|B4	-24255	NM_008695	18074	Mm.20348	NM_008695	ENSMUSG00000021806	Nid2	AW547149|Ly111|NID-2|entactin-2|nidogen-2	nidogen 2	protein-coding
unique_peak1-2025-7-4-0.477162735410827-1.09384600808989	chr15	10832158	10832628	+	0	NA	Intergenic	Intergenic	-49694	NM_030888	81799	Mm.280158	NM_030888	ENSMUSG00000058914	C1qtnf3	2310005P21Rik|CORS-26|CORS26|CTRP3|Corcs|Cors	C1q and tumor necrosis factor related protein 3	protein-coding
common_peak2-21376-27-32--0.0528481684632176-0.301029995663997	chr11	78535534	78536268	+	0	NA	Intergenic	Intergenic	-24974	NM_008702	18099	Mm.9001	NM_008702	ENSMUSG00000017376	Nlk	AI194375	nemo like kinase	protein-coding
common_peak2-32012-71-127--0.355555821280029-1.0000419899553	chr9	72639251	72641490	+	0	NA	Intergenic	Intergenic	-14711	NM_175485	235472	Mm.31696	NM_175485	ENSMUSG00000036030	Prtg	A230098A12Rik|Igdcc5	protogenin homolog (Gallus gallus)	protein-coding
unique_peak2-37884-0-6--3.64748585253182-1.56314192529759	chr5	139449758	139450148	+	0	NA	Intergenic	Intergenic	20954	NM_008808	18590	Mm.2675	NM_008808	ENSMUSG00000025856	Pdgfa	-	platelet derived growth factor, alpha	protein-coding
unique_peak2-37810-7-19--1.52283726458917-1.55050753388976	chr5	123973482	123974315	+	0	NA	intron (NM_023232, intron 1 of 5)	CpG	275	NM_023232	66593	Mm.46716	NM_023232	ENSMUSG00000029433	Diablo	0610041G12Rik|1700006L01Rik|AU040403|Smac	diablo homolog (Drosophila)	protein-coding
common_peak2-24094-39-61--0.338435063467721-0.585862008351123	chr16	32002526	32003905	+	0	NA	5' UTR (NM_177103, exon 1 of 10)	5' UTR (NM_177103, exon 1 of 10)	158	NM_177103	320213	Mm.152890	NM_023801		Senp5	6230429P13Rik|A730063F07Rik|AI851888|BB189556|SMT3IP3	SUMO/sentrin specific peptidase 5	protein-coding
common_peak2-23680-8-10--0.454209200689727-1.078512453669	chr15	85811044	85811598	+	0	NA	intron (NM_009886, intron 1 of 34)	intron (NM_009886, intron 1 of 34)	52886	NM_009886	12614	Mm.22680	NM_009886	ENSMUSG00000016028	Celsr1	Crsh|Scy|crash	cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog, Drosophila)	protein-coding
common_peak1-18467-9-20--1.20270401637454-1.23014042908325	chr8	84638696	84639159	+	0	NA	intron (NM_001297596, intron 24 of 24)	intron (NM_001297596, intron 24 of 24)	287558	NM_001254747	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak1-12421-8-8--0.164702583494742-1.00793137938329	chr17	74795945	74796459	+	0	NA	intron (NM_144798, intron 1 of 13)	B3|SINE|B2	1254	NM_144798	210148	Mm.243943	NM_144798	ENSMUSG00000024069	Slc30a6	9530029F08Rik|ZnT6	solute carrier family 30 (zinc transporter), member 6	protein-coding
common_peak1-14062-15-16--0.075298090694683-0.301029995663976	chr2	119787129	119787760	+	0	NA	intron (NM_001164274, intron 21 of 22)	intron (NM_001164274, intron 21 of 22)	-10991	NM_011941	26390	Mm.330501	NM_011941	ENSMUSG00000033902	Mapkbp1	2810483F24Rik|AW123212|JNKBP-1|Jnkbp1|mKIAA0596	mitogen-activated protein kinase binding protein 1	protein-coding
unique_peak1-1759-14-1-2.89921616035764-3.91338994363176	chr13	109437863	109438725	+	0	NA	Intergenic	Intergenic	-6077	NM_011056	238871	Mm.434429	NM_011056		Pde4d	9630011N22Rik|Dpde3	phosphodiesterase 4D, cAMP specific	protein-coding
common_peak1-12296-14-30--1.05498015002923-1.40782320807776	chr17	46274093	46274802	+	0	NA	intron (NM_029338, intron 2 of 4)	(CCTA)n|Simple_repeat|Simple_repeat	6700	NM_029338	75564	Mm.17993	NM_029338	ENSMUSG00000023966	Rsph9	1700027N10Rik	radial spoke head 9 homolog (Chlamydomonas)	protein-coding
common_peak1-15985-22-20-0.254966682308644-0.421916810733237	chr5	32195401	32196392	+	0	NA	intron (NM_181281, intron 5 of 10)	intron (NM_181281, intron 5 of 10)	195473	NM_181282	107976	Mm.482126	NM_144541	ENSMUSG00000052139	Bre	6030405P19Rik|AI429776|B830038C02Rik	brain and reproductive organ-expressed protein	protein-coding
common_peak2-27780-20-10-1.0286431659539-1.30248952876293	chr3	134339232	134339781	+	0	NA	Intergenic	Intergenic	-152465	NM_021382	21338	Mm.103810	NM_021382	ENSMUSG00000028172	Tacr3	Nk3r|Nkr|Tac3r	tachykinin receptor 3	protein-coding
common_peak2-19786-16-18--0.129663871175524-0.307235046933848	chr1	86153812	86154694	+	0	NA	Intergenic	Intergenic	-887112	NM_001037909	620078	Mm.386456	NM_175219	ENSMUSG00000052477	C130026I21Rik	4930565N07Rik|OTTMUSG00000029174	RIKEN cDNA C130026I21 gene	protein-coding
unique_peak2-34280-4-11--1.6084230145744-1.68134727924692	chr13	68582245	68582706	+	0	NA	Intergenic	RLTR6-int|LTR|ERV1	138523	NM_172480	210009	Mm.205514	NM_172480	ENSMUSG00000034617	Mtrr	4732420G08|MSR	5-methyltetrahydrofolate-homocysteine methyltransferase reductase	protein-coding
common_peak1-15406-30-35--0.000249591950439054-0.304088508634279	chr4	86574995	86576510	+	0	NA	intron (NM_001290543, intron 5 of 5)	intron (NM_001290543, intron 5 of 5)	55434	NM_139306	230379	Mm.45019	NM_139306	ENSMUSG00000038007	Acer2	2410116I05Rik|Asah3l|CRG-L1|maCER2	alkaline ceramidase 2	protein-coding
common_peak2-31505-18-12-0.612479433087259-0.739965416525508	chr8	107292779	107293382	+	0	NA	Intergenic	Lx6|LINE|L1	-26057	NM_001002775	442809	Mm.444779	NM_001002775		4932416K20Rik	-	RIKEN cDNA 4932416K20 gene	protein-coding
common_peak1-14500-11-16--0.578769256998726-0.503257505534083	chr3	14641620	14642330	+	0	NA	intron (NM_024495, intron 1 of 6)	intron (NM_024495, intron 1 of 6)	248	NM_024495	71934	Mm.158776	NM_024495	ENSMUSG00000027555	Car13	2310075C21Rik|Ca13	carbonic anhydrase 13	protein-coding
common_peak1-8744-8-18--1.24270509549601-1.15812782348128	chr11	4260119	4260611	+	0	NA	intron (NM_029458, intron 10 of 10)	Lx7|LINE|L1	80720	NM_029458	75828	Mm.159592	NM_029458	ENSMUSG00000020419	Hormad2	4930529M09Rik	HORMA domain containing 2	protein-coding
common_peak1-18532-10-10--0.103016273628528-0.301029995663987	chr8	94362904	94363460	+	0	NA	Intergenic	Intergenic	-37629	NM_008393	16373	Mm.238044	NM_008393	ENSMUSG00000031734	Irx3	AI894186	Iroquois related homeobox 3	protein-coding
common_peak1-16411-17-13-0.410941416147434-0.546772548767014	chr5	126538191	126538821	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	525718	NM_001190352	208151	Mm.40397	NM_001190352	ENSMUSG00000070498	Tmem132b	AK220418|mKIAA1786	transmembrane protein 132B	protein-coding
common_peak2-26186-35-27-0.6240153364049-1.10223211335955	chr2	25143420	25144725	+	0	NA	exon (NM_030055, exon 2 of 4)	exon (NM_030055, exon 2 of 4)	407	NM_030055	78217	Mm.160057	NM_030055	ENSMUSG00000026963	Tmem210	4930571C24Rik	transmembrane protein 210	protein-coding
common_peak1-12136-98-155--0.083633525431698-0.347053337503865	chr17	27554647	27556646	+	0	NA	Intergenic	ORR1C2|LTR|MaLR	60604	NR_106077	102466228		NR_106077		Mir7218	mmu-mir-7218	microRNA mir-7218	ncRNA
common_peak1-9752-40-75--0.588951830692487-1.29979449988493	chr12	52503849	52505008	+	0	NA	intron (NM_029825, intron 10 of 24)	B1_Mm|SINE|Alu	25861	NM_029825	76983	Mm.216511	NM_029825	ENSMUSG00000020952	Scfd1	3110021P21Rik|RA410|STXBP1L2	Sec1 family domain containing 1	protein-coding
common_peak2-23655-25-21-0.402418286707809-0.580176690544129	chr15	85011793	85012957	+	0	NA	Intergenic	Intergenic	-24063	NM_010180	14114	Mm.297992	NM_010180	ENSMUSG00000006369	Fbln1	-	fibulin 1	protein-coding
unique_peak2-38665-1-4--1.94898510510411-1.10720996964787	chr7	98326260	98326677	+	0	NA	intron (NM_011807, intron 1 of 22)	intron (NM_011807, intron 1 of 22)	87172	NM_011807	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
unique_peak2-33554-2-8--2.08737925770563-1.65811743852845	chr11	80702013	80702283	+	0	NA	intron (NM_001034013, intron 6 of 9)	intron (NM_001034013, intron 6 of 9)	30257	NM_029367	75622	Mm.26988	NM_029367	ENSMUSG00000053184	Spaca3	1700025M08Rik|ALLP17|Lyc3|SLLP1|mSLLP1	sperm acrosome associated 3	protein-coding
common_peak2-27952-37-62--0.451286852014098-0.817648941027521	chr4	34550570	34551619	+	0	NA	intron (NM_001159563, intron 4 of 19)	Lx7|LINE|L1	11097	NM_001159563	50793	Mm.399624	NM_015824		Orc3	Orc3l	origin recognition complex, subunit 3	protein-coding
common_peak2-19891-42-65--0.30206479149127-0.522142286192486	chr1	98094456	98096259	+	0	NA	Intergenic	Lx|LINE|L1	-177022	NR_040467	73454	Mm.396229	NR_040467		1700063A18Rik	-	RIKEN cDNA 1700063A18 gene	ncRNA
common_peak2-24635-8-12--0.695217300193522-0.475924844171029	chr17	34959422	34959931	+	0	NA	intron (NM_011413, intron 2 of 40)	intron (NM_011413, intron 2 of 40)	723	NM_011413	625018	Mm.439678	NM_011413		C4a	Slp	complement component 4A (Rodgers blood group)	protein-coding
common_peak1-10724-12-10-0.189344366450341-0.386243247519795	chr14	63122386	63122873	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-47503	NM_172810	239134	Mm.236557	NM_172810	ENSMUSG00000021933	Gucy1b2	B930025B03|GC-SB2	guanylate cyclase 1, soluble, beta 2	protein-coding
common_peak1-12174-41-61--0.253047605538215-0.456849196733789	chr17	30575540	30576721	+	0	NA	intron (NM_172618, intron 6 of 11)	MTEb-int|LTR|MaLR	-43005	NR_030688	623169	Mm.440508	NR_030688		Gm6402	EG623169	ribosomal protein S17 pseudogene	pseudo
common_peak1-9913-28-40--0.304592884796621-0.447010559430123	chr12	87471763	87472511	+	0	NA	intron (NM_029601, intron 3 of 7)	PB1D10|SINE|Alu	-38154	NR_046081	328136	Mm.312050	NR_046081	ENSMUSG00000097543	Gm805	-	predicted gene 805	ncRNA
unique_peak2-39047-13-27--1.02888289141984-1.21173582416604	chr8	70522608	70523243	+	0	NA	Intergenic	ORR1A2|LTR|MaLR	-24452	NM_177698	234353	Mm.32525	NM_027626	ENSMUSG00000030465	Psd3	4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D	pleckstrin and Sec7 domain containing 3	protein-coding
unique_peak2-37605-1-5--2.2120195109379-1.32905871926422	chr5	63755435	63755723	+	0	NA	Intergenic	Intergenic	-284763	NM_177006	319807	Mm.319487	NM_028470	ENSMUSG00000090061	Nwd2	3110047P20Rik|B830017A01Rik|Hn1-ps2|mKIAA1239	NACHT and WD repeat domain containing 2	protein-coding
common_peak1-7761-12-2-2.06381348436648-2.79529063155376	chr1	91817236	91817708	+	0	NA	Intergenic	Intergenic	10279	NM_010262	14472	Mm.204730	NM_010262		Gbx2	D130058E05Rik|Gbx-2|MMoxA|Stra7	gastrulation brain homeobox 2	protein-coding
unique_peak1-3726-19-4-2.08075923177432-3.05312482518673	chr19	46485306	46486218	+	0	NA	intron (NM_001025391, intron 2 of 11)	B1F|SINE|Alu	14376	NM_015752	24069	Mm.41210	NM_015752	ENSMUSG00000025231	Sufu	Su(fu)	suppressor of fused homolog (Drosophila)	protein-coding
common_peak1-15723-21-16-0.482026424015896-0.650819692678078	chr4	141559384	141560275	+	0	NA	intron (NM_177868, intron 1 of 31)	intron (NM_177868, intron 1 of 31)	7737	NM_177868	329977	Mm.252019	NM_028429	ENSMUSG00000051435	Fhad1	2900090M10Rik|B230311F11	forkhead-associated (FHA) phosphopeptide binding domain 1	protein-coding
common_peak1-11882-12-7-0.648775985087639-0.697979855752659	chr16	95779196	95779775	+	0	NA	Intergenic	MTC|LTR|MaLR	-27513	NM_133659	13876	Mm.164531	NM_133659	ENSMUSG00000040732	Erg	D030036I24Rik	avian erythroblastosis virus E-26 (v-ets) oncogene related	protein-coding
common_peak1-17282-6-5--0.0195643903408542-0.947717972411649	chr6	135320398	135320742	+	0	NA	intron (NM_001288627, intron 1 of 4)	L1MEe|LINE|L1	3059	NM_001288627	13730	Mm.182785	NM_010128	ENSMUSG00000030208	Emp1	I-8-09|TMP	epithelial membrane protein 1	protein-coding
unique_peak2-35824-2-8--2.08737925770563-1.65811743852845	chr18	64983021	64983279	+	0	NA	Intergenic	Lx7|LINE|L1	-64260	NM_001114386	83814	Mm.98668	NM_031881	ENSMUSG00000024589	Nedd4l	1300012C07Rik|Nedd4-2|Nedd4b	neural precursor cell expressed, developmentally down-regulated gene 4-like	protein-coding
common_peak1-9286-51-30-1.1207275152157-3.44473077378963	chr11	88236034	88237366	+	0	NA	intron (NM_054043, intron 7 of 13)	B4A|SINE|B4	70425	NR_039545	100628571		NR_039545	miRBase:MI0016973	Mir378b	mmu-mir-378b	microRNA 378b	ncRNA
unique_peak1-6051-13-3-1.77847203063777-2.58603100924543	chr6	115532972	115533645	+	0	NA	TTS (NM_001101431)	TTS (NM_001101431)	9286	NM_001101431	70291	Mm.133694	NM_001101431		Mkrn2os	2510049J12Rik	makorin, ring finger protein 2, opposite strand	protein-coding
common_peak1-17457-21-26--0.185398236897233-0.318406410381916	chr7	19228135	19228890	+	0	NA	Intergenic	ORR1A2-int|LTR|MaLR	13562	NM_027403	72242	Mm.326858	NM_027403	ENSMUSG00000070796	Psg21	1600019C01Rik|1600025N01Rik|1600026N13Rik|cea8	pregnancy-specific glycoprotein 21	protein-coding
unique_peak1-5098-14-4-1.57728806547028-2.4322161449009	chr4	150361731	150362554	+	0	NA	Intergenic	Intergenic	-9064	NM_011910	24111	Mm.89984	NM_011910	ENSMUSG00000028963	Uts2	UII|Ucn2|prepro-UII	urotensin 2	protein-coding
common_peak2-25883-19-8-1.23276232521937-1.61268301619756	chr19	44282322	44282858	+	0	NA	intron (NM_024450, intron 1 of 5)	intron (NM_024450, intron 1 of 5)	4812	NM_024450	30049	Mm.480594	NM_024450	ENSMUSG00000025202	Scd3	4930513N16Rik	stearoyl-coenzyme A desaturase 3	protein-coding
unique_peak2-33517-8-10--0.454209200689727-1.078512453669	chr11	75620021	75620554	+	0	NA	Intergenic	Intergenic	-10728	NM_007873	13447	Mm.5137	NM_007873	ENSMUSG00000020848	Doc2b	-	double C2, beta	protein-coding
unique_peak1-5765-13-2-2.19350952991661-3.03832868024006	chr6	52651934	52652644	+	0	NA	Intergenic	MLT1C|LTR|MaLR	-11434	NM_025816	52440	Mm.389757	NM_025816	ENSMUSG00000004535	Tax1bp1	1200003J11Rik|1700069J21Rik|AA930106|D6Ertd404e|D6Ertd772e|T6bp|TXBP151	Tax1 (human T cell leukemia virus type I) binding protein 1	protein-coding
common_peak2-25204-19-22--0.120874629395327-0.306080386793804	chr18	60648597	60649482	+	0	NA	intron (NM_134133, intron 1 of 1)	RLTR17|LTR|ERVK	12598	NM_134133	106878	Mm.273197	NM_134133	ENSMUSG00000038059	Smim3	2010002N04Rik|AI195350|AW561905|Nid67|cI-41	small integral membrane protein 3	protein-coding
common_peak2-24376-95-212--0.586794275201824-3.32664112287372	chr17	10317843	10320463	+	0	NA	Intergenic	Intergenic	193073	NM_021881	19317	Mm.130694	NM_021881	ENSMUSG00000062078	Qk	1110003F05Rik|1500005P18|QkI|l(17)-1Wis|l17Wis1	quaking	protein-coding
common_peak2-29567-18-31--0.687080848771648-0.820293215674341	chr6	47757625	47758182	+	0	NA	intron (NM_009787, intron 2 of 9)	RSINE1|SINE|B4	-4252	NR_030485	735289		NR_030485		Mir704	Mirn704|mmu-mir-704	microRNA 704	ncRNA
unique_peak1-2742-14-5-1.31425365963649-1.4372489031793	chr17	23739705	23740457	+	0	NA	intron (NM_001289484, intron 1 of 6)	intron (NM_001289484, intron 1 of 6)	2288	NM_001289482	332221	Mm.270315	NM_001033425	ENSMUSG00000023902	Zscan10	BC068284|Zfp206|Zkscan10|Znf206	zinc finger and SCAN domain containing 10	protein-coding
unique_peak2-33864-4-9--1.34538860874061-1.36011389749466	chr12	21112322	21112665	+	0	NA	Intergenic	B3|SINE|B2	-5124	NM_001004364	211914	Mm.358946	NM_001004364	ENSMUSG00000052632	Asap2	6530401G17Rik|Ddef2|Gm1523|Gm592|PAG3|PAP	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	protein-coding
common_peak2-21478-32-31-0.27909201921966-0.499999074040591	chr11	88098973	88099950	+	0	NA	Intergenic	Intergenic	-8084	NM_028859	74297	Mm.207320	NM_028859	ENSMUSG00000034031	1700106J16Rik	Ccdc182	RIKEN cDNA 1700106J16 gene	protein-coding
unique_peak1-1514-8-2-1.42025991722641-1.65811743852845	chr13	5846846	5847342	+	0	NA	Intergenic	Intergenic	10244	NR_045891	71867	Mm.179181	NR_045891		1700016G22Rik	-	RIKEN cDNA 1700016G22 gene	ncRNA
unique_peak1-4612-12-5-1.06381348436648-1.78669045979184	chr3	68470471	68470986	+	0	NA	Intergenic	Intergenic	-23838	NM_001159424	16159	Mm.103783	NM_008351	ENSMUSG00000027776	Il12a	IL-12p35|Il-12a|Ll12a|p35	interleukin 12a	protein-coding
unique_peak2-34593-2-6--1.72480917832092-1.26211192963361	chr14	70116863	70117178	+	0	NA	3' UTR (NM_134078, exon 10 of 10)	3' UTR (NM_134078, exon 10 of 10)	-9633	NM_001146012	71843	Mm.27738	NM_001146012	ENSMUSG00000034194	R3hcc1	1700020M16Rik|AA407796	R3H domain and coiled-coil containing 1	protein-coding
common_peak2-28337-30-31-0.169675409491873-0.382130460680153	chr4	134922838	134923454	+	0	NA	Intergenic	PB1D9|SINE|Alu	-14017	NM_001130477	51796	Mm.1963	NM_016799	ENSMUSG00000028809	Srrm1	AA407769|POP101|Srm160	serine/arginine repetitive matrix 1	protein-coding
common_peak1-9259-22-9-1.32535601020004-2.00244947055753	chr11	86961254	86962087	+	0	NA	intron (NM_197987, intron 7 of 23)	B1_Mus1|SINE|Alu	21093	NM_197987	68729	Mm.17436	NM_197987	ENSMUSG00000018548	Trim37	1110032A10Rik|2810004E07Rik|AI848587|AU043018|MUL|TEF3|mKIAA0898	tripartite motif-containing 37	protein-coding
unique_peak2-38275-2-4--1.23938235115068-0.931118710592187	chr6	129558941	129559328	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	13567	NM_033078	27007	Mm.8217	NM_033078	ENSMUSG00000030149	Klrk1	D6H12S2489E|NKG2-D|Nkg2d	killer cell lectin-like receptor subfamily K, member 1	protein-coding
unique_peak2-37577-2-10--2.37688587490062-2.09384600808989	chr5	36133672	36134163	+	0	NA	intron (NM_001177700, intron 1 of 16)	intron (NM_001177700, intron 1 of 16)	33388	NM_177678	231148	Mm.254446	NM_177678	ENSMUSG00000029095	Ablim2	AI606905|C230091L11	actin-binding LIM protein 2	protein-coding
common_peak1-8802-22-38--0.638118113774844-0.887741995158868	chr11	20531802	20532718	+	0	NA	5' UTR (NM_001038625, exon 1 of 2)	5' UTR (NM_001038625, exon 1 of 2)	280	NM_001038625	58172	Mm.339676	NM_021372	ENSMUSG00000049800	Sertad2	AB041541|AU021878|Kiaa0127|SEI-2|Sei2|TRIP-Br2|mKIAA0127	SERTA domain containing 2	protein-coding
common_peak1-18616-42-59--0.164561267741335-0.34908710939424	chr8	107587714	107588711	+	0	NA	Intergenic	RMER16-int|LTR|ERVK	15713	NM_198672	382053	Mm.295534	NM_198672	ENSMUSG00000069922	Ces3a	Ces3|Ces31|Es31	carboxylesterase 3A	protein-coding
common_peak2-24256-80-72-0.660751207489334-2.46745014621981	chr16	92620307	92622109	+	0	NA	intron (NM_001111022, intron 5 of 6)	intron (NM_001111022, intron 5 of 6)	76366	NM_001111023	12394	Mm.4081	NM_009821	ENSMUSG00000022952	Runx1	AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b	runt related transcription factor 1	protein-coding
unique_peak2-34995-7-6--0.00826409175941478-0.97990265578305	chr15	99588310	99588784	+	0	NA	intron (NM_028015, intron 1 of 9)	intron (NM_028015, intron 1 of 9)	14399	NM_028015	71949	Mm.390821	NM_028015		Cers5	2310081H14Rik|AU045339|AW544927|Lass5|Trh4	ceramide synthase 5	protein-coding
unique_peak2-38567-4-7--1.02346051385325-1.09384600808989	chr7	66365577	66365931	+	0	NA	Intergenic	Intergenic	-118366	NM_173010	22215	Mm.9002	NM_011668	ENSMUSG00000025326	Ube3a	4732496B02|5830462N02Rik|A130086L21Rik|Hpve6a|mKIAA4216	ubiquitin protein ligase E3A	protein-coding
unique_peak2-38331-20-38--0.797327434271056-1.23883036201157	chr6	148830666	148831995	+	0	NA	intron (NM_181541, intron 4 of 18)	RLTR17|LTR|ERVK	13429	NM_001301351	232560	Mm.150568	NM_181541	ENSMUSG00000030309	Caprin2	C1qdc1|Eeg1|rng140	caprin family member 2	protein-coding
unique_peak2-33333-9-9--0.132314688483142-1.03275496310833	chr11	20248971	20249429	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-16484	NM_018861	55963	Mm.6379	NM_018861	ENSMUSG00000020142	Slc1a4	ASCT-1|ASCT1|AW045657|SATT	solute carrier family 1 (glutamate/neutral amino acid transporter), member 4	protein-coding
unique_peak1-795-11-3-1.50869358425161-1.95434855131066	chr11	100155060	100155635	+	0	NA	Intergenic	ID_B1|SINE|B4	-24162	NM_212483	68239	Mm.158190	NM_212483	ENSMUSG00000053654	Krt42	2410039E07Rik|K17n|Ka22|ecat6	keratin 42	protein-coding
common_peak2-27415-21-8-1.39956426382392-2.11898024768848	chr3	88514546	88515049	+	0	NA	intron (NM_028814, intron 13 of 13)	intron (NM_028814, intron 13 of 13)	-5979	NM_009069	19769	Mm.4009	NM_009069		Rit1	RIBB|ROC1|Rit	Ras-like without CAAX 1	protein-coding
common_peak1-14327-58-59-0.389059339281978-0.932664372754135	chr2	163644151	163645247	+	0	NA	Intergenic	Intergenic	-1871	NM_016873	22403	Mm.13828	NM_016873	ENSMUSG00000027656	Wisp2	Ccn5|Crgr4|Ctgfl|Rcop1	WNT1 inducible signaling pathway protein 2	protein-coding
common_peak1-10465-7-7--0.200909169701811-0.97990265578305	chr13	110230339	110230795	+	0	NA	intron (NM_011056, intron 3 of 16)	intron (NM_011056, intron 3 of 16)	115629	NR_030644	100124489		NR_030644		Mir582	Mirn582|mmu-mir-582	microRNA 582	ncRNA
common_peak1-7708-22-10-1.18785248645011-1.74319850844462	chr1	86497189	86498108	+	0	NA	Intergenic	Intergenic	997737	NM_030194	109032	Mm.335802	NM_030194	ENSMUSG00000070034	Sp110	5031415C07Rik|52kDa|5830484A20Rik|ENSMUSG00000075603|Ifi75|Ipr1	Sp110 nuclear body protein	protein-coding
unique_peak2-36856-0-6--3.64748585253182-1.56314192529759	chr3	89411618	89411952	+	0	NA	intron (NM_080466, intron 2 of 7)	intron (NM_080466, intron 2 of 7)	87699	NM_080466	140493	Mm.120250	NM_080466		Kcnn3	KCa2.3|SK3|SKCA3	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	protein-coding
common_peak2-25428-38-35-0.401527657856218-0.7449989148481	chr19	3707664	3708968	+	0	NA	promoter-TSS (NM_028077)	promoter-TSS (NM_028077)	-17	NM_028077	72056	Mm.23780	NM_028077	ENSMUSG00000035372	1810055G02Rik	AI256204	RIKEN cDNA 1810055G02 gene	protein-coding
common_peak2-26446-19-26--0.352200175501782-0.416752705545949	chr2	71055740	71056343	+	0	NA	intron (NM_001198872, intron 2 of 18)	intron (NM_001198872, intron 2 of 18)	6038	NM_010064	13427	Mm.249479	NM_010064	ENSMUSG00000027012	Dync1i2	3110079H08Rik|AW554389|Dncic2	dynein cytoplasmic 1 intermediate chain 2	protein-coding
common_peak1-13735-17-6-1.41094141614743-1.84350559086818	chr2	32362463	32363198	+	0	NA	Intergenic	Intergenic	-28049	NM_153560	98952	Mm.4065	NM_153560	ENSMUSG00000039157	Fam102a	AI426465|C230093N12Rik|Eeig1	family with sequence similarity 102, member A	protein-coding
common_peak2-23882-39-44-0.123908150589479-0.359431063687663	chr16	20725715	20726520	+	0	NA	exon (NM_001173505, exon 6 of 6)	exon (NM_001173505, exon 6 of 6)	4554	NM_001289896	21832	Mm.3943	NM_009379	ENSMUSG00000022847	Thpo	Mgdf|Ml|Mpllg|Tpo	thrombopoietin	protein-coding
common_peak1-11534-21-22-0.0459273092092225-0.319918318021793	chr16	4624145	4625046	+	0	NA	intron (NM_025571, intron 1 of 4)	CpG	351	NM_025571	66449	Mm.354760	NM_025571	ENSMUSG00000014301	Pam16	2010110I09Rik|AV006767|CGI-136|Magmas|Tim16|Timm16	presequence translocase-asssociated motor 16 homolog (S. cerevisiae)	protein-coding
common_peak1-8952-24-15-0.793209902767717-1.16796998271032	chr11	54860053	54861291	+	0	NA	Intergenic	ID_B1|SINE|B4	-13699	NM_013472	11749	Mm.265347	NM_013472	ENSMUSG00000018340	Anxa6	AW107198|Anx6|AnxVI|Cabm|Camb	annexin A6	protein-coding
common_peak1-11264-30-11-1.58471290877072-3.34305003325519	chr15	81356554	81357786	+	0	NA	Intergenic	Intergenic	-59474	NM_177821	328572	Mm.258397	NM_177821	ENSMUSG00000055024	Ep300	A430090G16|A730011L11|KAT3B|p300|p300 HAT	E1A binding protein p300	protein-coding
common_peak2-30940-24-38--0.492192316094532-0.631311512744354	chr8	9977538	9978499	+	0	NA	5' UTR (NM_026868, exon 1 of 3)	5' UTR (NM_026868, exon 1 of 3)	301	NM_026868	68904	Mm.142570	NM_026868	ENSMUSG00000040396	Abhd13	1110065L07Rik|AI463703|AI788994	abhydrolase domain containing 13	protein-coding
unique_peak1-3750-13-3-1.77847203063777-2.58603100924543	chr19	53031931	53032683	+	0	NA	Intergenic	Intergenic	34636	NR_030678	100043450	Mm.145594	NR_030678		AA387883	-	expressed sequence AA387883	ncRNA
unique_peak1-2233-11-0-3.50869358425161-3.61235994796777	chr15	76157712	76158258	+	0	NA	exon (NM_175399, exon 1 of 3)	exon (NM_175399, exon 1 of 3)	158	NM_175399	109075	Mm.322752	NM_175399	ENSMUSG00000034259	Exosc4	1110039I09Rik|1500001N04Rik|Rrp41	exosome component 4	protein-coding
unique_peak2-37209-6-18--1.68252940306328-1.66449268468235	chr4	74251187	74251763	+	0	NA	Intergenic	L1Md_T|LINE|L1	353692	NM_144787	76804	Mm.209059	NM_144787	ENSMUSG00000028397	Kdm4c	2410141F18Rik|AA517467|Gasc1|Jmjd2c	lysine (K)-specific demethylase 4C	protein-coding
common_peak1-15049-41-22-1.17758674879165-3.01957526180442	chr3	122457790	122459021	+	0	NA	intron (NM_153422, intron 2 of 20)	intron (NM_153422, intron 2 of 20)	26329	NM_153422	242202	Mm.134911	NM_153422	ENSMUSG00000053965	Pde5a	Cgbpde|Cn5n|Pde5|Pde5a1	phosphodiesterase 5A, cGMP-specific	protein-coding
common_peak2-28039-23-20-0.32945008173032-0.471456499375596	chr4	57153267	57154108	+	0	NA	intron (NM_019427, intron 1 of 15)	intron (NM_019427, intron 1 of 15)	2341	NM_019427	54357	Mm.28217	NM_019427	ENSMUSG00000028434	Epb4.1l4b	6430543G08Rik|AA589614|AU021054|BB007528|D4Ertd346e|Ehm2|Epb41l4b|Lulu2	erythrocyte protein band 4.1-like 4b	protein-coding
common_peak1-10233-17-11-0.633333837483882-0.769930178837768	chr13	52061248	52061986	+	0	NA	Intergenic	Intergenic	119573	NM_011817	23882	Mm.281298	NM_011817	ENSMUSG00000021453	Gadd45g	AI327420|C86281|CR6|DDIT2|OIG37	growth arrest and DNA-damage-inducible 45 gamma	protein-coding
unique_peak1-2448-12-4-1.32684789020028-2.04196296489515	chr15	102062265	102062928	+	0	NA	promoter-TSS (NM_013566)	promoter-TSS (NM_013566)	-230	NM_013566	16421	Mm.58	NM_013566	ENSMUSG00000001281	Itgb7	Ly69	integrin beta 7	protein-coding
unique_peak2-38811-9-14--0.717277189204299-0.53895475198017	chr7	134114417	134115134	+	0	NA	TTS (NM_144926)	TTS (NM_144926)	-4653	NM_026638	52858	Mm.28219	NM_026638	ENSMUSG00000030682	Cdipt	9530042F15Rik|D7Bwg0575e|Pis|Pis1	CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)	protein-coding
unique_peak2-39712-9-11--0.395349094316936-0.344532117358383	chr9	118149568	118150076	+	0	NA	Intergenic	L1M4|LINE|L1	-90508	NM_026442	67899	Mm.9953	NM_026442	ENSMUSG00000039163	Cmc1	2010110K16Rik|2010312P05Rik|AI596001	COX assembly mitochondrial protein 1	protein-coding
common_peak2-29603-13-15--0.221527969362231-0.308519316180257	chr6	52012694	52013280	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-39961	NR_110440	102635415	Mm.333063	NR_110440		Halr1	Gm15055|Haunt|Linchoxa1|OTTMUSG00000018881|linc-Hoxa1	Hoxa adjacent long noncoding RNA 1	ncRNA
common_peak2-27953-6-7--0.434601889619698-0.97990265578305	chr4	34614632	34615123	+	0	NA	intron (NM_011895, intron 7 of 7)	RMER6A|LTR|ERVK	19810	NM_011895	24060	Mm.281885	NM_011895	ENSMUSG00000028293	Slc35a1	AA408150|AI314851	solute carrier family 35 (CMP-sialic acid transporter), member 1	protein-coding
common_peak2-22709-27-27-0.184191028837632-0.393151991482004	chr13	101540769	101541778	+	0	NA	intron (NM_021886, intron 3 of 8)	intron (NM_021886, intron 3 of 8)	4581	NM_021886	26886	Mm.273502	NM_021886	ENSMUSG00000045273	Cenph	1700021I11Rik|2410018A12Rik|2610042E16Rik|2810046K12Rik|AU044255|CENP-H|ENP	centromere protein H	protein-coding
common_peak1-17469-21-21-0.110057646628938-0.344491671143527	chr7	19796603	19797423	+	0	NA	promoter-TSS (NM_175668)	promoter-TSS (NM_175668)	-874	NM_175668	319197	Mm.135984	NM_175668	ENSMUSG00000044317	Gpr4	-	G protein-coupled receptor 4	protein-coding
common_peak2-22485-14-5-1.31425365963649-1.4372489031793	chr13	49300016	49300408	+	0	NA	intron (NM_026738, intron 3 of 5)	intron (NM_026738, intron 3 of 5)	11183	NM_026738	68480	Mm.3336	NM_026738	ENSMUSG00000037960	1110007C09Rik	AI851695|Bincard	RIKEN cDNA 1110007C09 gene	protein-coding
common_peak2-26197-26-17-0.75797409071615-1.09210977391291	chr2	25465545	25466202	+	0	NA	intron (NM_029859, intron 10 of 13)	intron (NM_029859, intron 10 of 13)	-1907	NM_001024616	227624	Mm.29600	NM_001024616	ENSMUSG00000015087	Rabl6	B230208H17Rik|Rbel1|Rbel1a|Rbel1b|parf	RAB, member RAS oncogene family-like 6	protein-coding
unique_peak2-39039-7-12--0.901348887842903-1.31827279259406	chr8	69822475	69823076	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-191882	NM_008673	17960	Mm.14125	NM_008673	ENSMUSG00000025588	Nat1	Nat-1	N-acetyl transferase 1	protein-coding
common_peak2-26058-9-14--0.717277189204299-0.53895475198017	chr2	32570940	32571457	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	-2706	NR_039536	100628606		NR_039536		Mir3960	mmu-mir-3960	microRNA 3960	ncRNA
unique_peak1-3144-10-2-1.77145284428761-2.09384600808989	chr18	36486313	36486838	+	0	NA	Intergenic	Intergenic	-21703	NM_001081365	66060	Mm.272527	NM_001081365		Cystm1	0610010O12Rik	cysteine-rich transmembrane module containing 1	protein-coding
common_peak2-27062-41-54--0.0802110086759997-0.30922471743021	chr2	181580616	181582281	+	0	NA	intron (NM_153594, intron 5 of 6)	intron (NM_153594, intron 5 of 6)	8889	NM_001291211	245867	Mm.491085	NM_153594	ENSMUSG00000027589	Pcmtd2	5330414D10Rik|AI314201	protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2	protein-coding
unique_peak2-37443-7-6--0.00826409175941478-0.97990265578305	chr4	155218883	155219297	+	0	NA	TTS (NM_024263)	TTS (NM_024263)	-2431	NM_010091	13542	Mm.3400	NM_010091	ENSMUSG00000029071	Dvl1	Dvl|mKIAA4029	dishevelled, dsh homolog 1 (Drosophila)	protein-coding
common_peak2-21471-101-169--0.155376699401282-0.473739908211797	chr11	87471020	87471613	+	0	NA	3' UTR (NM_001045527, exon 6 of 6)	3' UTR (NM_001045527, exon 6 of 6)	-5273	NM_172448	207742	Mm.440230	NM_172448	ENSMUSG00000034177	Rnf43	4732452J19Rik	ring finger protein 43	protein-coding
common_peak1-12025-33-22-0.807775606468516-1.45230360914611	chr17	17004902	17005913	+	0	NA	Intergenic	Intergenic	-195660	NM_001005358	449000	Mm.483718	NM_001005358	ENSMUSG00000096696	Zfp960	-	zinc finger protein 960	protein-coding
unique_peak1-5320-15-1-3.01216475055566-4.18809100057339	chr5	77386435	77387062	+	0	NA	intron (NM_025939, intron 2 of 8)	intron (NM_025939, intron 2 of 8)	-6145	NM_172146	231327	Mm.202337	NM_172146	ENSMUSG00000029246	Ppat	5730454C12Rik|AA408689|AA675351|AI507113|C79945	phosphoribosyl pyrophosphate amidotransferase	protein-coding
common_peak2-29112-6-4-0.24347001549294-0.989110657569874	chr5	123136870	123137193	+	0	NA	intron (NM_001038845, intron 12 of 12)	ORR1B1|LTR|MaLR	-20535	NM_011026	18438	Mm.290884	NM_011026	ENSMUSG00000029470	P2rx4	AI504491|AW555605|D5Ertd444e|P2X4	purinergic receptor P2X, ligand-gated ion channel 4	protein-coding
common_peak2-30171-8-8--0.164702583494742-1.00793137938329	chr6	149187441	149187876	+	0	NA	Intergenic	PB1D10|SINE|Alu	-50424	NM_001113424	232566	Mm.209147	NM_001113424	ENSMUSG00000068250	Amn1	5830467E07Rik|A230083D09|C730024G19Rik	antagonist of mitotic exit network 1	protein-coding
common_peak1-7767-65-72-0.30234138059711-0.736222529913312	chr1	92786621	92788040	+	0	NA	Intergenic	ETnERV2-int|LTR|ERVK	-24347	NM_053015	171531	Mm.105208	NM_053015	ENSMUSG00000026303	Mlph	2210418F23Rik|5031433I09Rik|AW228792|D1Wsu84e|Slac-2a|l(1)-3Rk|l1Rk3|ln	melanophilin	protein-coding
unique_peak2-38943-5-8--0.874305337448166-1.10484139239135	chr8	25785559	25786199	+	0	NA	promoter-TSS (NM_010084)	promoter-TSS (NM_010084)	-652	NM_010084	13524	Mm.89943	NM_010084	ENSMUSG00000031552	Adam18	Adam27|Dtgn3|Tmdc3|tMDCIII	a disintegrin and metallopeptidase domain 18	protein-coding
common_peak1-15296-13-12-0.0780323124966764-0.334470287753051	chr4	43030632	43031435	+	0	NA	exon (NM_020035, exon 9 of 10)	exon (NM_020035, exon 9 of 10)	7595	NM_020035	56703	Mm.143738	NM_020035	ENSMUSG00000028454	Pigo	mFLJ00350	phosphatidylinositol glycan anchor biosynthesis, class O	protein-coding
common_peak2-24939-25-22-0.338287949288093-0.51032171069054	chr18	36699379	36700573	+	0	NA	intron (NM_001271544, intron 19 of 21)	B1_Mur1|SINE|Alu	12170	NM_001271544	240215	Mm.135463	NM_172830	ENSMUSG00000024485	Slc4a9	AE4|D630003B07|D630024F24Rik	solute carrier family 4, sodium bicarbonate cotransporter, member 9	protein-coding
unique_peak2-34855-9-9--0.132314688483142-1.03275496310833	chr15	76715579	76715995	+	0	NA	intron (NM_145916, intron 3 of 4)	PB1D9|SINE|Alu	6081	NM_145916	223669	Mm.38948	NM_145916	ENSMUSG00000033669	Zfp7	KRAB20|KRAB7|Krox-2|Zfp-7|Zfp65|Zfp80|Zfp86-rs1|mszf73-2	zinc finger protein 7	protein-coding
common_peak1-9749-7-7--0.200909169701811-0.97990265578305	chr12	51848105	51848581	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-98133	NM_008858	18760	Mm.133719	NM_008858	ENSMUSG00000002688	Prkd1	PKD|PKD1|Pkcm|Prkcm	protein kinase D1	protein-coding
unique_peak2-35566-5-13--1.51173525806346-1.78669045979184	chr17	66751507	66752114	+	0	NA	intron (NM_001114098, intron 3 of 14)	intron (NM_001114098, intron 3 of 14)	47280	NM_172963	68617	Mm.33421	NM_172963	ENSMUSG00000052105	Mtcl1	1110012J17Rik|Ccdc165|D130071O13|Kiaa0802|Soga2|mKIAA0802|t8219b25	microtubule crosslinking factor 1	protein-coding
common_peak2-20786-12-15--0.351224014912361-0.332077462497413	chr10	120627731	120628487	+	0	NA	Intergenic	(TAA)n|Simple_repeat|Simple_repeat	120136	NM_029057	74694	Mm.233833	NM_029057	ENSMUSG00000052302	Tbc1d30	4930505D03Rik	TBC1 domain family, member 30	protein-coding
common_peak1-13586-37-88--0.949740359480579-3.20834184032052	chr2	14054684	14056232	+	0	NA	intron (NM_011484, intron 8 of 13)	intron (NM_011484, intron 8 of 13)	-40693	NM_001081310	625286	Mm.158781	NM_001081310	ENSMUSG00000061531	Tmem236	2010003H20Rik|Fam23a|Gm613	transmembrane protein 236	protein-coding
common_peak1-17852-68-69-0.44067776235333-1.19988796804558	chr7	112427545	112428546	+	0	NA	Intergenic	Intergenic	-8564	NM_001011533	259161	Mm.377867	NM_001011533	ENSMUSG00000073909	Olfr688	MOR40-16|MOR40-5|Olfr688-ps1	olfactory receptor 688	protein-coding
common_peak1-9358-23-11-1.13680500378792-1.66030262873422	chr11	97439807	97440845	+	0	NA	Intergenic	Intergenic	-3886	NM_018873	56013	Mm.342665	NM_018873	ENSMUSG00000038453	Srcin1	P140|SNIP|mKIAA1684|p140Cap	SRC kinase signaling inhibitor 1	protein-coding
unique_peak1-5129-7-2-1.21412832957703-1.45399745587252	chr5	3335064	3335590	+	0	NA	Intergenic	Intergenic	-8985	NM_009873	12571	Mm.31672	NM_009873	ENSMUSG00000040274	Cdk6	5830411I20|AI504062|Crk2	cyclin-dependent kinase 6	protein-coding
common_peak2-24948-34-46--0.172520324676372-0.340524918943711	chr18	38599801	38601301	+	0	NA	intron (NM_022996, intron 1 of 7)	intron (NM_022996, intron 1 of 7)	21922	NM_022996	65113	Mm.102496	NM_022996	ENSMUSG00000024425	Ndfip1	0610010M22Rik|N4wbp5	Nedd4 family interacting protein 1	protein-coding
common_peak1-9125-23-23-0.136805003787924-0.340939137447793	chr11	75178235	75179037	+	0	NA	intron (NM_001102611, intron 2 of 10)	RLTR6_Mm|LTR|ERV1	16701	NM_001102611	319822	Mm.340377	NM_177009	ENSMUSG00000018809	Smyd4	G430029E23Rik	SET and MYND domain containing 4	protein-coding
common_peak2-30978-10-5-0.771452844287613-1.33892459842472	chr8	3416685	3417063	+	0	NA	intron (NM_133962, intron 1 of 19)	intron (NM_133962, intron 1 of 19)	23866	NM_133962	102098	Mm.170461	NM_133962	ENSMUSG00000004568	Arhgef18	AI467246|D030053O22Rik	rho/rac guanine nucleotide exchange factor (GEF) 18	protein-coding
unique_peak1-2372-26-8-1.75797409071615-3.2467506969819	chr15	95015333	95016471	+	0	NA	Intergenic	Intergenic	-36153	NR_015482	100043315	Mm.159041	NR_015482		LOC100043315	-	uncharacterized LOC100043315	ncRNA
common_peak1-17301-75-27-1.93171206968568-11.3978922783633	chr6	137541043	137543412	+	0	NA	intron (NM_007945, intron 1 of 21)	intron (NM_007945, intron 1 of 21)	-22697	NM_001271587	13860	Mm.235346	NM_007945	ENSMUSG00000015766	Eps8	AW261790	epidermal growth factor receptor pathway substrate 8	protein-coding
unique_peak1-5066-11-1-2.50869358425161-2.83420869758413	chr4	139180234	139180884	+	0	NA	intron (NM_175438, intron 1 of 14)	intron (NM_175438, intron 1 of 14)	1750	NM_175438	212647	Mm.273571	NM_175438	ENSMUSG00000028737	Aldh4a1	A930035F14Rik|Ahd-1|Ahd1|Aldh4|Aldh5a1|E330022C09|P5cd|P5cdh|P5cdhl|P5cdhs|Ssdh1	aldehyde dehydrogenase 4 family, member A1	protein-coding
unique_peak1-261-7-2-1.21412832957703-1.45399745587252	chr1	92379397	92379847	+	0	NA	Intergenic	Intergenic	-120378	NM_133805	108679	Mm.119177	NM_133805	ENSMUSG00000034432	Cops8	9430009J09Rik|AA408242|Csn8|Sgn8	COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)	protein-coding
unique_peak2-36114-5-16--1.79184317725619-1.61682445937017	chr2	3474539	3475101	+	0	NA	Intergenic	RMER19C|LTR|ERVK	44483	NM_177647	227526	Mm.211455	NM_177647	ENSMUSG00000039496	Cdnf	9330140G23|Armetl1	cerebral dopamine neurotrophic factor	protein-coding
common_peak2-27896-9-10--0.269818212233077-1.05503135781948	chr4	144949038	144949588	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-44263	NM_009401	21941	Mm.12810	NM_009401	ENSMUSG00000028602	Tnfrsf8	Cd30|D1S166E|Ki|Ki-1	tumor necrosis factor receptor superfamily, member 8	protein-coding
unique_peak2-35627-1-9--2.94898510510411-2.31132995230379	chr17	87350936	87351322	+	0	NA	Intergenic	RMER1B|Other|Other	-3902	NM_029121	74915	Mm.159369	NM_029121	ENSMUSG00000053375	Atp6v1e2	4930500C14Rik|Atp6e1|E1	ATPase, H+ transporting, lysosomal V1 subunit E2	protein-coding
common_peak2-29588-36-41-0.0870036633889937-0.341444061219173	chr6	50382945	50384063	+	0	NA	intron (NM_001163645, intron 1 of 21)	intron (NM_001163645, intron 1 of 21)	22665	NM_001163645	71720	Mm.44153	NM_027881	ENSMUSG00000029822	Osbpl3	1200014M06Rik|6720421I08Rik|A530055M08|ORP3|OSBP3	oxysterol binding protein-like 3	protein-coding
common_peak1-11200-8-8--0.164702583494742-1.00793137938329	chr15	77888083	77888586	+	0	NA	intron (NM_007583, intron 1 of 3)	intron (NM_007583, intron 1 of 3)	61376	NM_007583	12300	Mm.277338	NM_007583		Cacng2	AW060990|B230105C07Rik|B930041E13Rik|stargazer|stargazin|stg|wag|waggler	calcium channel, voltage-dependent, gamma subunit 2	protein-coding
common_peak1-8817-13-12-0.0780323124966764-0.334470287753051	chr11	22437034	22437670	+	0	NA	Intergenic	Lx|LINE|L1	25066	NM_153596	103765	Mm.221274	NM_153596	ENSMUSG00000049904	Tmem17	AI503894|AW049890	transmembrane protein 17	protein-coding
unique_peak1-3150-8-3-1.00522241794757-1.39487600375387	chr18	36710110	36710567	+	0	NA	intron (NM_001271547, intron 19 of 19)	B3A|SINE|B2	-9919	NM_175375	108857	Mm.482287	NM_175375	ENSMUSG00000024483	Ankhd1	1110004O12Rik|4933432B13Rik|9130019P20Rik|A530027J04Rik|A630021B20Rik|AA571404|Mask|mFLJ00246|mKIAA1085	ankyrin repeat and KH domain containing 1	protein-coding
common_peak2-21682-17-38--1.06710588065721-1.70296806472143	chr11	103966645	103967414	+	0	NA	Intergenic	Intergenic	-27167	NM_007762	12921	Mm.1892	NM_007762	ENSMUSG00000018634	Crhr1	CRFR1|Crhr	corticotropin releasing hormone receptor 1	protein-coding
common_peak1-15640-34-41--0.0102488957774947-0.30364629078125	chr4	134734205	134735439	+	0	NA	TTS (NM_019732)	TTS (NM_019732)	58262	NM_019732	12399	Mm.378894	NM_019732	ENSMUSG00000070691	Runx3	AML2|Cbfa3|Pebp2a3	runt related transcription factor 3	protein-coding
common_peak2-24910-89-99-0.391110565051278-1.27095071039578	chr17	84789983	84791125	+	0	NA	intron (NM_183021, intron 25 of 37)	ORR1E|LTR|MaLR	74994	NM_183021	240174	Mm.246767	NM_177826	ENSMUSG00000024251	Thada	6530405K19|A930021O22|AU019899|BC052885|GITA	thyroid adenoma associated	protein-coding
common_peak1-18530-25-12-1.16141018720401-1.87883858401928	chr8	94262044	94262939	+	0	NA	Intergenic	Intergenic	63062	NM_001253822	16373	Mm.238044	NM_008393	ENSMUSG00000031734	Irx3	AI894186	Iroquois related homeobox 3	protein-coding
unique_peak2-39144-5-18--1.95230784944944-1.99473478107052	chr8	86768645	86769351	+	0	NA	Intergenic	Intergenic	4662	NM_001007571	101966	Mm.200723	NM_001007571	ENSMUSG00000019362	D8Ertd738e	AA589584	DNA segment, Chr 8, ERATO Doi 738, expressed	protein-coding
common_peak1-15816-14-12-0.198776442216552-0.373562084705529	chr5	86065039	86065657	+	0	NA	Intergenic	Intergenic	429260	NM_007683	12617	Mm.4649	NM_007683	ENSMUSG00000029253	Cenpc1	CENP-C|Cenpc	centromere protein C1	protein-coding
unique_peak2-34408-5-11--1.28934283672701-1.477227296591	chr14	8098228	8098857	+	0	NA	Intergenic	Intergenic	66367	NM_001025085	545013	Mm.422841	NM_001025085	ENSMUSG00000072726	Gm5797	EG545013	predicted gene 5797	protein-coding
common_peak1-9934-24-37--0.454717610675869-0.572500200098104	chr12	105784648	105785458	+	0	NA	Intergenic	Intergenic	-73607	NM_010351	14836	Mm.129	NM_010351	ENSMUSG00000021095	Gsc	-	goosecoid homeobox	protein-coding
common_peak1-17290-8-11--0.579740082773585-1.14218153353838	chr6	136518736	136519207	+	0	NA	intron (NM_019426, intron 5 of 14)	intron (NM_019426, intron 5 of 14)	51599	NM_019426	54343	Mm.173271	NM_019426	ENSMUSG00000030213	Atf7ip	2610204M12Rik|AM|Mcaf1	activating transcription factor 7 interacting protein	protein-coding
common_peak2-26971-23-23-0.136805003787924-0.340939137447793	chr2	167062765	167063222	+	0	NA	intron (NM_008968, intron 1 of 9)	intron (NM_008968, intron 1 of 9)	3044	NM_008968	19223	Mm.2339	NM_008968	ENSMUSG00000017969	Ptgis	Cyp8|Cyp8a1|Pgis	prostaglandin I2 (prostacyclin) synthase	protein-coding
common_peak1-17135-100-91-0.713209818753777-3.56525612157116	chr6	115807779	115809367	+	0	NA	intron (NM_001167763, intron 1 of 28)	intron (NM_001167763, intron 1 of 28)	5027	NM_031177	81896	Mm.333335	NM_031177	ENSMUSG00000030323	Ift122	C86139|Wdr10|sopb	intraflagellar transport 122	protein-coding
common_peak1-10239-11-21--0.950738034385684-0.991115276827166	chr13	53376806	53377333	+	0	NA	intron (NM_013846, intron 1 of 8)	intron (NM_013846, intron 1 of 8)	4409	NM_013846	26564	Mm.342774	NM_013846	ENSMUSG00000021464	Ror2	Ntrkr2|mRor2	receptor tyrosine kinase-like orphan receptor 2	protein-coding
common_peak1-17633-11-9-0.186765489364251-0.344532117358383	chr7	47043592	47044085	+	0	NA	Intergenic	RSINE1|SINE|B4	270702	NM_001004139	70227	Mm.333800	NM_001004139	ENSMUSG00000068959	Zfp619	3000002G13Rik	zinc finger protein 619	protein-coding
common_peak2-30192-19-42--1.02357742804041-1.85054049304327	chr7	30588097	30589001	+	0	NA	Intergenic	ORR1A1|LTR|MaLR	-12542	NM_146185	233056	Mm.224766	NM_146185	ENSMUSG00000011427	Zfp790	6330581L23Rik	zinc finger protein 790	protein-coding
common_peak1-17866-9-7-0.18961340640422-1.05908390183068	chr7	114066345	114066885	+	0	NA	Intergenic	L1_Mm|LINE|L1	8901	NM_001011542	258173	Mm.453832	NM_001011542	ENSMUSG00000073899	Olfr1532-ps1	MOR260-6P|MOR260-9P|Olfr708	olfactory receptor 1532, pseudogene 1	protein-coding
common_peak1-12021-61-135--0.704713511500999-3.02059385864799	chr17	15704168	15705730	+	0	NA	Intergenic	RMER17D2|LTR|ERVK	-4662	NM_144809	213389	Mm.215162	NM_144809	ENSMUSG00000051977	Prdm9	BC012016|Dsbc1|G1-419-29|Meisetz|Rcr1|repro7	PR domain containing 9	protein-coding
common_peak1-18072-57-69-0.136750023133962-0.396265517229168	chr8	22593222	22594595	+	0	NA	Intergenic	L1VL1|LINE|L1	-25822	NM_183268	68009	Mm.327348	NM_183268	ENSMUSG00000095066	Defa20	2010016F14Rik|Defcr20	defensin, alpha, 20	protein-coding
unique_peak1-3892-11-2-1.92373108353046-2.32232533660526	chr2	20520741	20521340	+	0	NA	intron (NM_001081006, intron 3 of 21)	intron (NM_001081006, intron 3 of 21)	79900	NM_001177631	208618	Mm.237935	NM_029895	ENSMUSG00000036617	Etl4	6620402G01Rik|9430077C05Rik|BC026657|E330027G05Rik|Etl-4|Skt	enhancer trap locus 4	protein-coding
common_peak2-28600-35-41-0.0390528356837434-0.311371317671728	chr5	21786683	21787265	+	0	NA	intron (NM_011261, intron 2 of 63)	RMER1B|Other|Other	63549	NM_011261	19699	Mm.425236	NM_011261	ENSMUSG00000042453	Reln	reeler|rl	reelin	protein-coding
unique_peak1-2667-12-2-2.06381348436648-2.79529063155376	chr16	55555348	55555986	+	0	NA	Intergenic	Intergenic	266584	NM_001159394	80859	Mm.247272	NM_030612	ENSMUSG00000035356	Nfkbiz	AA408868|INAP|Mail	nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta	protein-coding
unique_peak1-963-10-0-3.35641534500877-3.31132995230379	chr11	60776279	60776783	+	0	NA	Intergenic	L1MA4|LINE|L1	30972	NM_008928	26397	Mm.18494	NM_008928	ENSMUSG00000018932	Map2k3	AW212142|MEK3|MKK3|Prkmk3|mMKK3b	mitogen-activated protein kinase kinase 3	protein-coding
unique_peak2-34167-6-10--0.894033508256995-1.21398586181642	chr13	31617822	31618183	+	0	NA	Intergenic	Lx7|LINE|L1	-32037	NM_008239	15220	Mm.44235	NM_008239	ENSMUSG00000038415	Foxq1	HFH-1|Hfh1|Hfh1l|sa	forkhead box Q1	protein-coding
common_peak1-17381-36-28-0.621340091040183-1.16863888781394	chr7	126582781	126584028	+	0	NA	Intergenic	L1Md_T|LINE|L1	19382	NM_025989	67133	Mm.46403	NM_025989	ENSMUSG00000030954	Gp2	2310037I18Rik|AV060639	glycoprotein 2 (zymogen granule membrane)	protein-coding
unique_peak1-5848-10-2-1.77145284428761-2.09384600808989	chr6	82875471	82876114	+	0	NA	intron (NM_011350, intron 5 of 13)	(TTTCC)n|Simple_repeat|Simple_repeat	13952	NM_011350	20355	Mm.270543	NM_011350	ENSMUSG00000000627	Sema4f	-	sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	protein-coding
common_peak2-26790-27-19-0.669617856007873-1.02859851787301	chr2	148022899	148023810	+	0	NA	Intergenic	Intergenic	-150649	NM_010446	15376	Mm.938	NM_010446	ENSMUSG00000037025	Foxa2	HNF3-beta|HNF3beta|Hnf-3b|Hnf3b|Tcf-3b|Tcf3b	forkhead box A2	protein-coding
unique_peak2-38936-8-29--1.90166817766095-3.04993787975775	chr8	25016250	25016914	+	0	NA	intron (NM_177086, intron 4 of 6)	intron (NM_177086, intron 4 of 6)	236449	NM_177086	320158	Mm.121274	NM_177086	ENSMUSG00000037492	Zmat4	9630048M01Rik	zinc finger, matrin type 4	protein-coding
common_peak2-28681-85-149--0.273415442371229-0.798859123350393	chr5	32459016	32460067	+	0	NA	3' UTR (NM_008037, exon 4 of 4)	3' UTR (NM_008037, exon 4 of 4)	20696	NM_008037	14284	Mm.24684	NM_008037	ENSMUSG00000029135	Fosl2	Fra-2	fos-like antigen 2	protein-coding
common_peak2-27473-9-7-0.18961340640422-1.05908390183068	chr3	90706973	90707340	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-168428	NR_033593	619677	Mm.396622	NR_033593	ENSMUSG00000086377	4930529C04Rik	-	zinc finger, BED domain containing 4 pseudogene	pseudo
common_peak1-15861-48-88--0.504806279731583-1.20397006444706	chr5	4103841	4105513	+	0	NA	promoter-TSS (NM_020010)	promoter-TSS (NM_020010)	20	NM_020010	13121	Mm.140158	NM_020010	ENSMUSG00000001467	Cyp51	AI426508|CYPLI|Cyp51a1|Ldm|P450-14DM|P450LI	cytochrome P450, family 51	protein-coding
common_peak1-19318-18-13-0.505564229170747-0.625923329873571	chr9	123212968	123213808	+	0	NA	Intergenic	Intergenic	-43481	NM_001002267	72309	Mm.8569	NM_001002267	ENSMUSG00000054871	Tmem158	2310037P21Rik|Ris1	transmembrane protein 158	protein-coding
unique_peak2-34009-2-5--1.50241675698448-1.08602067057793	chr12	102283781	102284166	+	0	NA	intron (NM_001160214, intron 10 of 14)	intron (NM_001160214, intron 10 of 14)	-16780	NM_026681	68339	Mm.156217	NM_026681	ENSMUSG00000021182	Ccdc88c	0610010D24Rik|AV000935|AW324073|Daple|mKIAA1509	coiled-coil domain containing 88C	protein-coding
common_peak2-29281-15-24--0.631691439219068-0.650819692678081	chr5	143269671	143270602	+	0	NA	intron (NM_001122730, intron 16 of 18)	intron (NM_001122730, intron 16 of 18)	-6797	NR_110503	102631757	Mm.373036	NR_110502		LOC102631757	-	uncharacterized LOC102631757	ncRNA
unique_peak1-2053-11-6-0.701338662194009-1.32595962126035	chr15	27503101	27503563	+	0	NA	intron (NM_020332, intron 8 of 11)	intron (NM_020332, intron 8 of 11)	2083	NR_106065	102466808		NR_106065		Mir7117	mmu-mir-7117	microRNA mir-7117	ncRNA
common_peak2-29654-8-7-0.00522241794757061-1.00793137938329	chr6	71270867	71271288	+	0	NA	Intergenic	Intergenic	-1729	NM_009858	12526	Mm.333148	NM_009858	ENSMUSG00000053044	Cd8b1	Cd8b|Ly-3|Ly-C|Lyt-3	CD8 antigen, beta chain 1	protein-coding
unique_peak2-38744-4-5--0.608423014574403-0.909929411522249	chr7	113711410	113711742	+	0	NA	Intergenic	RLTR27|LTR|ERVK	76583	NM_001277179	434223	Mm.276443	NM_001277179		Gm1966	-	predicted gene 1966	protein-coding
common_peak2-22373-38-57--0.286528335829042-0.468749305398727	chr13	29983812	29985010	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-36954	NM_144536	68916	Mm.212227	NM_144536	ENSMUSG00000006191	Cdkal1	1190005B03Rik|6620401C13Rik	CDK5 regulatory subunit associated protein 1-like 1	protein-coding
common_peak1-16061-18-25--0.38752056691274-0.421916810733234	chr5	45520031	45520937	+	0	NA	Intergenic	MTE-int|LTR|MaLR	163044	NR_073013	75783	Mm.218472	NR_073013		4930431F12Rik	-	RIKEN cDNA 4930431F12 gene	ncRNA
unique_peak1-2890-19-8-1.23276232521937-1.61268301619756	chr17	43360003	43360982	+	0	NA	Intergenic	B4|SINE|B4	-46804	NM_133776	77596	Mm.159950	NM_133776	ENSMUSG00000041293	Gpr110	5031409J19Rik|KPG_009	G protein-coupled receptor 110	protein-coding
common_peak2-26741-29-31-0.112290080615111-0.353704024845522	chr2	132211696	132212660	+	0	NA	promoter-TSS (NM_144944)	promoter-TSS (NM_144944)	-995	NM_144944	246313	Mm.283777	NM_144944	ENSMUSG00000050558	Prokr2	B830005M06Rik|EG-VEGRF2|Gpcr73l1|Gpr73l1|PKR2	prokineticin receptor 2	protein-coding
unique_peak2-34407-13-18--0.469455482805817-0.409888142029227	chr14	7962844	7963872	+	0	NA	intron (NM_001270812, intron 2 of 5).3	intron (NM_001270812, intron 2 of 5).3	-25387	NM_001024712	100042149	Mm.396155	NM_001024712	ENSMUSG00000092167	Gm3696	544988|ENSMUSG00000056940|Gm10014	predicted gene 3696	protein-coding
common_peak1-8611-9-5-0.604650905683064-1.21398586181642	chr10	116261214	116261742	+	0	NA	intron (NM_001033333, intron 10 of 24)	intron (NM_001033333, intron 10 of 24)	72457	NM_001033333	237558	Mm.336386	NM_001033333	ENSMUSG00000034057	Myrfl	Gm239	myelin regulatory factor-like	protein-coding
common_peak2-21508-7-7--0.200909169701811-0.97990265578305	chr11	94145425	94145830	+	0	NA	Intergenic	B3A|SINE|B2	37598	NM_026313	67684	Mm.30927	NM_026313	ENSMUSG00000020863	Luc7l3	3300001P08Rik|Luc7a	LUC7-like 3 (S. cerevisiae)	protein-coding
unique_peak2-35343-6-11--1.01956439034085-1.32595962126035	chr17	24528240	24528754	+	0	NA	intron (NM_001039581, intron 17 of 31)	intron (NM_001039581, intron 17 of 31)	22961	NR_033554	654822	Mm.489806	NM_001039561	ENSMUSG00000073437	D330041H03Rik	-	RIKEN cDNA D330041H03 gene	ncRNA
common_peak1-8434-30-31-0.169675409491873-0.382130460680153	chr10	77621714	77623006	+	0	NA	Intergenic	Intergenic	10153	NM_138601	28295	Mm.268691	NM_138601	ENSMUSG00000053329	D10Jhu81e	C21orf33|ES1	DNA segment, Chr 10, Johns Hopkins University 81 expressed	protein-coding
unique_peak1-610-11-4-1.18676548936425-1.68134727924692	chr10	22202197	22202745	+	0	NA	Intergenic	L1_Mur3|LINE|L1	79852	NR_028580	100038752	Mm.392859	NR_028580	ENSMUSG00000096937	Gm10825	ENSMUSG00000075295	predicted gene 10825	ncRNA
common_peak2-25043-10-10--0.103016273628528-0.301029995663987	chr18	31910241	31910765	+	0	NA	Intergenic	RLTR14|LTR|ERV1	-8975	NM_153515	225339	Mm.290804	NM_153515	ENSMUSG00000041915	Ammecr1l	5430429D03Rik|AU022236|AU040755|AW111353|E230022H04Rik	AMME chromosomal region gene 1-like	protein-coding
unique_peak1-803-14-9-0.577288065470282-0.630231561310125	chr11	3373655	3374332	+	0	NA	intron (NR_028317, intron 2 of 3)	intron (NR_028317, intron 2 of 3)	-14237	NM_172791	237625	Mm.100476	NM_172791	ENSMUSG00000034579	Pla2g3	-	phospholipase A2, group III	protein-coding
common_peak2-29201-39-60--0.314976090643733-0.542494191925768	chr5	136565435	136567824	+	0	NA	intron (NM_133914, intron 2 of 20)	intron (NM_133914, intron 2 of 20)	6843	NM_001039103	54153	Mm.290655	NM_133914	ENSMUSG00000004952	Rasa4	AA793972|AW112107|BB079060|CAPRI|GAPL	RAS p21 protein activator 4	protein-coding
common_peak1-16437-7-4-0.477162735410827-1.09384600808989	chr5	134678750	134679121	+	0	NA	intron (NM_053266, intron 8 of 15)	B1_Mur1|SINE|Alu	19027	NM_053266	114674	Mm.218744	NM_053266	ENSMUSG00000015942	Gtf2ird2	1700012P16Rik	GTF2I repeat domain containing 2	protein-coding
unique_peak1-5064-22-7-1.6472841050874-2.63337704757512	chr4	137697370	137698453	+	0	NA	intron (NM_001256198, intron 12 of 32)	B1_Mur1|SINE|Alu	-21213	NR_105825	102466907		NR_105825		Mir6399	mmu-mir-6399	microRNA mir-6399	ncRNA
common_peak2-27920-26-28-0.0699180970308904-0.316008636696532	chr4	11155725	11156355	+	0	NA	exon (NM_178112, exon 13 of 28)	exon (NM_178112, exon 13 of 28)	25366	NM_178112	72656	Mm.246713	NM_178112	ENSMUSG00000040738	Ints8	2810013E07Rik|AV063769|D130008D20Rik	integrator complex subunit 8	protein-coding
common_peak2-29910-24-15-0.793209902767717-1.16796998271032	chr6	114920336	114921214	+	0	NA	Intergenic	Intergenic	-49005	NM_177683	232334	Mm.268357	NM_177683		Vgll4	BC048841|VGL-4	vestigial like 4 (Drosophila)	protein-coding
common_peak2-27966-16-24--0.525592547506663-0.561823156887258	chr4	41274430	41275398	+	0	NA	Intergenic	RSINE1|SINE|B4	-12980	NM_026893	68970	Mm.28891	NM_026893	ENSMUSG00000028436	Dcaf12	1500001L20Rik|5830424K06Rik|AA420338|AI851081|Wdr40a	DDB1 and CUL4 associated factor 12	protein-coding
unique_peak1-3982-11-3-1.50869358425161-1.95434855131066	chr2	32896909	32897492	+	0	NA	intron (NM_178888, intron 7 of 28)	intron (NM_178888, intron 7 of 28)	45524	NM_178888	99326	Mm.41290	NM_178888	ENSMUSG00000038860	Garnl3	AW120551	GTPase activating RANGAP domain-like 3	protein-coding
common_peak1-15746-5-7--0.704380336005853-1.01466476204226	chr4	149171291	149171581	+	0	NA	Intergenic	Intergenic	-23060	NM_027460	70556	Mm.41877	NM_027460	ENSMUSG00000028982	Slc25a33	5730438N18Rik|Pnc1	solute carrier family 25, member 33	protein-coding
common_peak1-13140-10-14--0.550475250599749-0.446472590016315	chr19	9981850	9982448	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-8126	NM_016692	16319	Mm.29755	NM_016692	ENSMUSG00000024660	Incenp	2700067E22Rik|AU019509|C130081E20|C77457	inner centromere protein	protein-coding
unique_peak2-35579-6-10--0.894033508256995-1.21398586181642	chr17	71355923	71356384	+	0	NA	Intergenic	Intergenic	-4280	NM_026064	67268	Mm.489605	NM_026064	ENSMUSG00000024048	Myl12a	2900073G15Rik|AI838292|C80200	myosin, light chain 12A, regulatory, non-sarcomeric	protein-coding
unique_peak2-35435-1-6--2.43441193227435-1.56314192529759	chr17	34949621	34950054	+	0	NA	intron (NM_011413, intron 30 of 40)	intron (NM_011413, intron 30 of 40)	-8466	NM_009995	13079	Mm.440407	NM_009995	ENSMUSG00000024365	Cyp21a1	21-OH|21OH|21OHA|21OHB|CYP21OH-A|Cyp21|Cyp21-ps1|Cyp21B|Cyp21a2-ps|Cyp21a2ps|Oh21-1|Oh21-2	cytochrome P450, family 21, subfamily a, polypeptide 1	protein-coding
common_peak2-29650-7-7--0.200909169701811-0.97990265578305	chr6	67106639	67107053	+	0	NA	Intergenic	Intergenic	-110127	NM_001113564	66870	Mm.240490	NM_025814	ENSMUSG00000036371	Serbp1	1200009K13Rik|9330147J08Rik|AL022786|Pairbp1	serpine1 mRNA binding protein 1	protein-coding
common_peak1-14185-40-37-0.411048169307513-0.786737236353031	chr2	144527252	144528457	+	0	NA	intron (NM_025314, intron 4 of 5)	MTE2b|LTR|MaLR	102165	NM_025314	66044	Mm.28109	NM_025314	ENSMUSG00000027430	Dtd1	0610006H08Rik|DUE-B|Hars2	D-tyrosyl-tRNA deacylase 1	protein-coding
common_peak1-18323-7-17--1.37083417114412-1.23399803405144	chr8	57505306	57505787	+	0	NA	Intergenic	Intergenic	880215	NM_175939	244486	Mm.67684	NM_175939	ENSMUSG00000046258	Adam29	-	a disintegrin and metallopeptidase domain 29	protein-coding
common_peak1-14050-14-18--0.348711353085941-0.360333814299795	chr2	119208409	119208977	+	0	NA	exon (NM_026574, exon 31 of 36)	exon (NM_026574, exon 31 of 36)	31715	NM_026929	69065	Mm.35083	NM_026929	ENSMUSG00000027313	Chac1	1810008K03Rik	ChaC, cation transport regulator 1	protein-coding
common_peak2-25713-28-18-0.805031606377877-1.27334590136207	chr19	21652231	21652980	+	0	NA	Intergenic	Intergenic	74676	NM_025423	66206	Mm.272430	NM_025423	ENSMUSG00000035171	1110059E24Rik	-	RIKEN cDNA 1110059E24 gene	protein-coding
common_peak2-21343-23-15-0.721767504509081-0.949797625454541	chr11	76925081	76925867	+	0	NA	intron (NM_176965, intron 13 of 17)	RSINE1|SINE|B4	-33535	NM_001012309	237859	Mm.156195	NM_001012309	ENSMUSG00000037958	Ccdc55	8030451K07|AI851076|AL022898|NSpr70|NSrp70|Nsrp1	coiled-coil domain containing 55	protein-coding
unique_peak2-39291-1-20--4.0193744329955-4.8766546284749	chr8	123165557	123165867	+	0	NA	Intergenic	(TCCCC)n|Simple_repeat|Simple_repeat	-7430	NM_197988	68918	Mm.473736	NM_197988	ENSMUSG00000043687	1190005I06Rik	-	RIKEN cDNA 1190005I06 gene	protein-coding
common_peak1-9078-19-14-0.495796731053168-0.607095980551316	chr11	69580909	69581739	+	0	NA	intron (NM_029348, intron 1 of 3)	intron (NM_029348, intron 1 of 3)	1910	NM_029348	75580	Mm.426361	NM_029348	ENSMUSG00000018750	Zbtb4	2310026P19Rik|9230111I22Rik|mKIAA1538	zinc finger and BTB domain containing 4	protein-coding
common_peak2-21432-14-37--1.34871135308594-2.38724857749547	chr11	86484634	86485391	+	0	NA	intron (NM_029478, intron 1 of 11)	intron (NM_029478, intron 1 of 11)	12312	NM_029478	75909	Mm.390398	NM_029478	ENSMUSG00000018171	Vmp1	3110098I04Rik|4930579A11Rik|AI787464|Tango5|Tmem49|ni-2	vacuole membrane protein 1	protein-coding
unique_peak1-4059-13-5-1.19350952991661-1.95509489018123	chr2	60879608	60880318	+	0	NA	Intergenic	L1Md_T|LINE|L1	-66755	NR_045335	100038493	Mm.388076	NR_045335	ENSMUSG00000075325	Gm13582	ENSMUSG00000075325|OTTMUSG00000012844	predicted gene 13582	ncRNA
unique_peak2-32605-5-4--0.0263084308932156-0.909929411522249	chr1	92906996	92907369	+	0	NA	intron (NM_001111312, intron 1 of 12)	MER20|DNA|MER1_type	11878	NM_001111312	16978	Mm.45039	NM_008515	ENSMUSG00000026305	Lrrfip1	AU024550|Fliiap1	leucine rich repeat (in FLII) interacting protein 1	protein-coding
common_peak2-22422-36-52--0.248599368395444-0.410818340144431	chr13	37439691	37441136	+	0	NA	intron (NM_010745, intron 1 of 4)	intron (NM_010745, intron 1 of 4)	3199	NM_010745	17084	Mm.2639	NM_010745	ENSMUSG00000021423	Ly86	MD-1|MD1	lymphocyte antigen 86	protein-coding
common_peak1-12096-27-23-0.40658345017408-0.622271369641148	chr17	25188346	25189058	+	0	NA	intron (NM_134126, intron 16 of 29)	intron (NM_134126, intron 16 of 29)	29357	NM_001001183	407831	Mm.34379	NM_001001183	ENSMUSG00000024168	Tmem204	-	transmembrane protein 204	protein-coding
unique_peak2-36715-4-10--1.48289213249054-1.5150158574804	chr3	51908778	51909191	+	0	NA	promoter-TSS (NM_001004176)	promoter-TSS (NM_001004176)	-56	NM_001004176	433586	Mm.234972	NM_001004176	ENSMUSG00000061143	Maml3	AV234550|BC049812|Mam-2|mKIAA1816	mastermind like 3 (Drosophila)	protein-coding
unique_peak2-36691-0-7--3.84013093047421-1.80617997398389	chr3	34663819	34664259	+	0	NA	Intergenic	Intergenic	-6958	NR_110488	102638436	Mm.261793	NR_110488		Peril	-	Peril transcript	ncRNA
common_peak2-32434-12-12--0.0516637330534535-0.309718203022949	chrX	169880784	169881271	+	0	NA	Intergenic	Intergenic	-3464178	NR_029457	654820	Mm.34441	NM_001039559	ENSMUSG00000072844	G530011O06Rik	-	RIKEN cDNA G530011O06 gene	ncRNA
unique_peak2-39038-8-12--0.695217300193522-0.475924844171029	chr8	69808483	69809197	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-205817	NM_008673	17960	Mm.14125	NM_008673	ENSMUSG00000025588	Nat1	Nat-1	N-acetyl transferase 1	protein-coding
common_peak2-27728-9-10--0.269818212233077-1.05503135781948	chr3	123334699	123335150	+	0	NA	intron (NR_121616, intron 3 of 13)	ORR1E|LTR|MaLR	-12556	NM_001293682	83398	Mm.443908	NM_031186	ENSMUSG00000027977	Ndst3	4921531K01Rik|4930511P15Rik|N-HSST 3|NDST-3	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	protein-coding
unique_peak2-37054-2-12--2.61789397440441-2.55640854263862	chr3	137999018	137999600	+	0	NA	Intergenic	Intergenic	23059	NM_026945	69117	Mm.46265	NM_026945	ENSMUSG00000053054	Adh6a	1810009C16Rik|Adh5a	alcohol dehydrogenase 6A (class V)	protein-coding
common_peak2-23249-31-64--0.797129142215331-1.88758293112677	chr15	11995114	11996316	+	0	NA	Intergenic	Intergenic	-51891	NM_011767	22763	Mm.273496	NM_011767	ENSMUSG00000022201	Zfr	C920030H05Rik	zinc finger RNA binding protein	protein-coding
common_peak1-18603-8-18--1.24270509549601-1.15812782348128	chr8	107031306	107031824	+	0	NA	intron (NM_180958, intron 3 of 19)	MER63D|DNA|AcHobo	2222	NM_180958	320022	Mm.249775	NM_180958	ENSMUSG00000052616	Ccdc79	4930532D21Rik|BB085179|Terb1	coiled-coil domain containing 79	protein-coding
unique_peak1-1819-10-0-3.35641534500877-3.31132995230379	chr14	32039865	32040331	+	0	NA	intron (NM_001025379, intron 15 of 15)	intron (NM_001025379, intron 15 of 15)	9039	NM_001025379	218877	Mm.27812	NM_001025379	ENSMUSG00000021904	Sema3g	AK129018	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G	protein-coding
common_peak2-26269-11-8-0.338768582809301-1.14218153353838	chr2	30658643	30659120	+	0	NA	intron (NR_028486, intron 1 of 6)	intron (NR_028486, intron 1 of 6)	303	NR_028486	73598	Mm.34166	NM_198000	ENSMUSG00000044320	1700001O22Rik	1700113K14Rik|4930549G18Rik	RIKEN cDNA 1700001O22 gene	protein-coding
common_peak1-11470-20-11-0.903112283870037-1.11267835143409	chr15	101980895	101981641	+	0	NA	intron (NM_146064, intron 1 of 14)	intron (NM_146064, intron 1 of 14)	262	NM_146064	223920	Mm.358862	NM_146064	ENSMUSG00000023045	Soat2	ACAT2|D15Wsu97e	sterol O-acyltransferase 2	protein-coding
unique_peak1-6907-17-5-1.63333383748388-2.19184853030482	chr8	105305218	105306070	+	0	NA	intron (NM_009866, intron 1 of 12)	intron (NM_009866, intron 1 of 12)	3367	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
common_peak2-27339-42-63--0.257670672132816-0.451511310064814	chr3	69721978	69723042	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-58694	NM_001286959	66183	Mm.45481	NM_133675	ENSMUSG00000043461	Sptssb	1110032A04Rik|ADMP|Sssptb	serine palmitoyltransferase, small subunit B	protein-coding
unique_peak1-6535-10-3-1.35641534500877-1.75805390616669	chr7	125492598	125493068	+	0	NA	Intergenic	L1MA4|LINE|L1	94233	NM_138649	110058	Mm.156558	NM_138649	ENSMUSG00000058420	Syt17	Bk	synaptotagmin XVII	protein-coding
unique_peak1-2385-14-7-0.899216160357645-0.947446088118041	chr15	97073407	97074077	+	0	NA	TTS (NM_001164602)	TTS (NM_001164602)	-3796	NM_172293	239647	Mm.130036	NM_172293	ENSMUSG00000044250	Pced1b	Fam113b	PC-esterase domain containing 1B	protein-coding
common_peak2-22832-13-10-0.319040412000471-0.446472590016315	chr14	20660316	20660823	+	0	NA	intron (NR_105025, intron 1 of 2)	intron (NR_105025, intron 1 of 2)	2422	NR_105025	52512	Mm.483998	NR_105025		D14Ertd670e	-	DNA segment, Chr 14, ERATO Doi 670, expressed	ncRNA
common_peak2-22202-22-20-0.254966682308644-0.421916810733237	chr12	111038219	111038942	+	0	NA	Intergenic	Intergenic	52492	NR_037233	100499517		NR_037233	miRBase:MI0014035	Mir3072	mmu-mir-3072	microRNA 3072	ncRNA
common_peak2-28388-34-61--0.572127783385609-1.06647553678992	chr4	139351778	139353174	+	0	NA	intron (NM_011039, intron 4 of 8)	intron (NM_011039, intron 4 of 8)	36407	NM_011039	18509	Mm.218760	NM_011039	ENSMUSG00000028736	Pax7	Pax-7	paired box 7	protein-coding
unique_peak1-2264-13-5-1.19350952991661-1.95509489018123	chr15	77945992	77946536	+	0	NA	intron (NM_007583, intron 1 of 3)	intron (NM_007583, intron 1 of 3)	3446	NM_007583	12300	Mm.277338	NM_007583		Cacng2	AW060990|B230105C07Rik|B930041E13Rik|stargazer|stargazin|stg|wag|waggler	calcium channel, voltage-dependent, gamma subunit 2	protein-coding
unique_peak1-6247-11-4-1.18676548936425-1.68134727924692	chr7	19319817	19320302	+	0	NA	Intergenic	Intergenic	16620	NM_001004152	243862	Mm.389833	NM_001004152	ENSMUSG00000044903	Psg22	AA408604|cea9	pregnancy-specific glycoprotein 22	protein-coding
common_peak2-29979-88-124-0.0496281245084456-0.322488629889589	chr6	120362848	120365003	+	0	NA	intron (NM_145997, intron 19 of 27)	intron (NM_145997, intron 19 of 27)	-49290	NM_008359	16172	Mm.4481	NM_008359	ENSMUSG00000002897	Il17ra	AW538159|Cdw217|Il17r|VDw217	interleukin 17 receptor A	protein-coding
common_peak2-32270-10-20--1.03590207776999-1.03889213727317	chrX	13041972	13042599	+	0	NA	Intergenic	MTD|LTR|MaLR	-2513	NM_173415	236690	Mm.90233	NM_173415	ENSMUSG00000051228	Nyx	CLNP|CSNB1|CSNB4|nob	nyctalopin	protein-coding
common_peak2-26062-38-28-0.713471664170958-1.45748092439675	chr2	38485789	38486822	+	0	NA	intron (NM_011187, intron 5 of 7)	intron (NM_011187, intron 5 of 7)	13121	NM_011187	19177	Mm.389251	NM_011187	ENSMUSG00000026750	Psmb7	AU020723|MC14	proteasome (prosome, macropain) subunit, beta type 7	protein-coding
common_peak1-8695-23-14-0.814876908900562-1.09492971584134	chr11	61619255	61620246	+	0	NA	intron (NM_013881, intron 15 of 26)	B1_Mus1|SINE|Alu	-44160	NM_001164243	212627	Mm.27703	NM_144806	ENSMUSG00000020528	Prpsap2	A230054F23Rik	phosphoribosyl pyrophosphate synthetase-associated protein 2	protein-coding
common_peak2-27273-34-19-1.0601404321139-2.23152841032562	chr3	57320396	57321079	+	0	NA	intron (NM_133784, intron 2 of 6)	PB1D10|SINE|Alu	59061	NM_133784	97064	Mm.405029	NM_133784	ENSMUSG00000027803	Wwtr1	2310058J06Rik|2610021I22Rik|C78399|Taz	WW domain containing transcription regulator 1	protein-coding
common_peak1-16990-15-9-0.690236655668294-0.732381977911291	chr6	87887814	87888660	+	0	NA	Intergenic	Intergenic	24267	NM_173737	232210	Mm.246241	NM_173737	ENSMUSG00000030060	Hmces	8430410A17Rik|C85376	5-hydroxymethylcytosine (hmC) binding, ES cell specific	protein-coding
common_peak1-11934-24-12-1.09277018462662-1.73042999925837	chr17	84179956	84181152	+	0	NA	intron (NM_001171053, intron 9 of 13)	intron (NM_001171053, intron 9 of 13)	65576	NM_025325	107766	Mm.30100	NM_025325	ENSMUSG00000000673	Haao	0610007K21Rik|0610012J07Rik|3-HAO|3-HAOxase|3HAO	3-hydroxyanthranilate 3,4-dioxygenase	protein-coding
common_peak2-25655-15-16--0.075298090694683-0.301029995663976	chr19	10279984	10280665	+	0	NA	promoter-TSS (NM_001163431)	promoter-TSS (NM_001163431)	-199	NM_001163431	69038	Mm.375100	NM_026919	ENSMUSG00000036372	Tmem258	1810006K21Rik	transmembrane protein 258	protein-coding
unique_peak2-39443-3-8--1.58390809140159-1.39487600375387	chr9	47589143	47589575	+	0	NA	intron (NM_001025600, intron 1 of 8)	intron (NM_001025600, intron 1 of 8)	36932	NR_046048	100038460	Mm.447649	NR_046048		Gm10677	ENSMUSG00000074363	predicted gene 10677	ncRNA
common_peak2-29237-13-16--0.30899081061257-0.330004445983672	chr5	139118048	139118844	+	0	NA	Intergenic	Intergenic	54359	NM_183025	243308	Mm.36612	NM_183025	ENSMUSG00000056014	A430033K04Rik	C86988	RIKEN cDNA A430033K04 gene	protein-coding
common_peak1-17692-13-9-0.456543935750406-0.53895475198017	chr7	70305010	70305698	+	0	NA	intron (NM_007390, intron 2 of 9)	B1_Mm|SINE|Alu	52058	NM_007390	11441	Mm.113464	NM_007390	ENSMUSG00000030525	Chrna7	Acra7|alpha7	cholinergic receptor, nicotinic, alpha polypeptide 7	protein-coding
common_peak1-15139-64-80-0.125596398823979-0.383784045838184	chr3	144569502	144571393	+	0	NA	Intergenic	(TTTC)n|Simple_repeat|Simple_repeat	-11472	NM_001039222	622139	Mm.447150	NM_001039222	ENSMUSG00000074196	Gm6289	EG622139	predicted gene 6289	protein-coding
common_peak1-8248-11-7-0.508693584251613-1.21681515183528	chr10	18875802	18876399	+	0	NA	intron (NR_038021, intron 1 of 3)	intron (NR_038021, intron 1 of 3)	-10944	NR_038022	100504265	Mm.383417	NR_038021		Gm20139	-	predicted gene, 20139	ncRNA
unique_peak2-36226-4-6--0.830815435910851-0.989110657569874	chr2	35682292	35682682	+	0	NA	intron (NM_029774, intron 6 of 9)	intron (NM_029774, intron 6 of 9)	7777	NR_040618	77665	Mm.400558	NR_040618	ENSMUSG00000086449	9030204H09Rik	-	RIKEN cDNA 9030204H09 gene	ncRNA
unique_peak1-4236-23-4-2.39983940962172-4.21583923654667	chr2	124855243	124856453	+	0	NA	Intergenic	Intergenic	-38015	NM_175034	317750	Mm.330538	NM_175034	ENSMUSG00000035183	Slc24a5	F630045L20Rik|JSX|NCKX5|NCX5|Oca6	solute carrier family 24, member 5	protein-coding
common_peak1-10701-23-25-0.0213277863679888-0.30528805757448	chr14	57664440	57665244	+	0	NA	intron (NM_016975, intron 1 of 1)	intron (NM_016975, intron 1 of 1)	11718	NM_001271623	14611	Mm.57207	NM_016975		Gja3	Cnx46|Cx43|Cx46|Gja-3	gap junction protein, alpha 3	protein-coding
common_peak1-16358-11-8-0.338768582809301-1.14218153353838	chr5	121837174	121837824	+	0	NA	Intergenic	Intergenic	-1875	NM_172275	231712	Mm.20488	NM_172275	ENSMUSG00000042726	Trafd1	1110008K06Rik|Fln29	TRAF type zinc finger domain containing 1	protein-coding
unique_peak2-36831-5-13--1.51173525806346-1.78669045979184	chr3	88531884	88532417	+	0	NA	intron (NR_028056, intron 5 of 5)	B2_Mm1a|SINE|B2	11374	NM_001163310	19769	Mm.4009	NM_009069		Rit1	RIBB|ROC1|Rit	Ras-like without CAAX 1	protein-coding
unique_peak1-1397-23-5-2.13680500378792-3.68490442130631	chr12	69997612	69998451	+	0	NA	Intergenic	MER67C|LTR|ERV1	262142	NM_009093	20090	Mm.379006	NM_009093	ENSMUSG00000034892	Rps29	-	ribosomal protein S29	protein-coding
common_peak2-28944-10-16--0.73104749624157-0.604422558181019	chr5	99243384	99244077	+	0	NA	Intergenic	MTD|LTR|MaLR	-39728	NM_173404	110075	Mm.209571	NM_173404	ENSMUSG00000029335	Bmp3	9130206H07|9530029I04Rik	bone morphogenetic protein 3	protein-coding
unique_peak1-2564-6-3-0.565398110380302-1.08602067057793	chr16	25377185	25377670	+	0	NA	intron (NM_175165, intron 4 of 5)	intron (NM_175165, intron 4 of 5)	90524	NM_175165	71338	Mm.126851	NM_175165	ENSMUSG00000048399	Tprg	5430420C16Rik|Tprg1	transformation related protein 63 regulated	protein-coding
common_peak1-11758-39-39-0.293833152031791-0.548322060310103	chr16	38088944	38090380	+	0	NA	promoter-TSS (NR_033221)	promoter-TSS (NR_033221)	-316	NR_033221	414072	Mm.483602	NR_033221		BC031361	-	cDNA sequence BC031361	ncRNA
common_peak1-13392-116-83-1.10181191073066-8.25608958829391	chr19	46986939	46988935	+	0	NA	intron (NR_028353, intron 3 of 18)	intron (NR_028353, intron 3 of 18)	48904	NM_029810	76952	Mm.40965	NM_029810	ENSMUSG00000025041	Nt5c2	2010002I23Rik|CnII|ENSMUSG00000025039|Gm9751|Gmp|Nt5b|Pnt5|cN-II	5'-nucleotidase, cytosolic II	protein-coding
common_peak2-24337-19-8-1.23276232521937-1.61268301619756	chr17	4769620	4770203	+	0	NA	Intergenic	Intergenic	-225163	NM_001085355	239985	Mm.133401	NM_001085355	ENSMUSG00000069729	Arid1b	8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235	AT rich interactive domain 1B (SWI-like)	protein-coding
unique_peak1-6660-9-2-1.60465090568306-1.87199725847353	chr8	14995590	14996111	+	0	NA	intron (NM_172751, intron 27 of 28)	intron (NM_172751, intron 27 of 28)	-15175	NM_029116	74901	Mm.46675	NM_029116	ENSMUSG00000055675	Kbtbd11	2900016B01Rik|4930465M17Rik|mKIAA0711	kelch repeat and BTB (POZ) domain containing 11	protein-coding
common_peak1-9440-37-33-0.43853023023548-0.767679714496325	chr11	102555272	102556325	+	0	NA	intron (NM_025918, intron 1 of 4)	intron (NM_025918, intron 1 of 4)	3241	NM_025918	52715	Mm.277638	NM_025918	ENSMUSG00000020925	Ccdc43	2610001E01Rik|D11Ertd707e	coiled-coil domain containing 43	protein-coding
unique_peak2-38382-2-7--1.91745425626332-1.45399745587252	chr7	16415298	16415701	+	0	NA	Intergenic	B2_Mm2|SINE|B2	9529	NM_145710	252830	Mm.25863	NM_145710	ENSMUSG00000041583	Obox6	D17Ertd599e	oocyte specific homeobox 6	protein-coding
unique_peak1-6504-9-7-0.18961340640422-1.05908390183068	chr7	116001322	116001827	+	0	NA	Intergenic	Lx|LINE|L1	11092	NM_001011846	258136	Mm.377356	NM_001011846	ENSMUSG00000066240	Olfr517	MOR268-4	olfactory receptor 517	protein-coding
common_peak2-22383-9-7-0.18961340640422-1.05908390183068	chr13	31332143	31332648	+	0	NA	intron (NR_045957, intron 1 of 2)	intron (NR_045957, intron 1 of 2)	560	NR_045957	73924	Mm.417825	NR_045957	ENSMUSG00000087460	4930401O12Rik	-	RIKEN cDNA 4930401O12 gene	ncRNA
common_peak2-25564-36-37-0.231393572724169-0.470780655014941	chr19	6840152	6841387	+	0	NA	Intergenic	Intergenic	63665	NR_039555	100628576		NR_039555		Mir5046	mmu-mir-5046|mu-mir-5046	microRNA 5046	ncRNA
unique_peak2-37833-2-50--4.58987959823482-12.2729761093104	chr5	131537108	131538824	+	0	NA	intron (NM_145218, intron 5 of 10)	intron (NM_145218, intron 5 of 10)	245426	NM_145218	212996	Mm.299204	NM_145218		Wbscr17	AA388321|E330012B09Rik	Williams-Beuren syndrome chromosome region 17 homolog (human)	protein-coding
common_peak1-16801-38-54--0.20990705422613-0.377714458142987	chr6	43665468	43666549	+	0	NA	Intergenic	Lx|LINE|L1	-49834	NM_013861	29807	Mm.320979	NM_013861	ENSMUSG00000029735	Tpk1	-	thiamine pyrophosphokinase	protein-coding
common_peak1-16767-16-8-0.948338640825749-1.02063122982878	chr6	35020250	35021008	+	0	NA	intron (NM_001164413, intron 3 of 11)	intron (NM_001164413, intron 3 of 11)	63108	NM_001164412	53621	Mm.214525	NM_016877	ENSMUSG00000038784	Cnot4	Not4|Not4h|Not4hp	CCR4-NOT transcription complex, subunit 4	protein-coding
common_peak1-19020-8-10--0.454209200689727-1.078512453669	chr9	63706703	63707248	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	-101174	NM_016769	17127	Mm.7320	NM_016769	ENSMUSG00000032402	Smad3	AU022421|Madh3	SMAD family member 3	protein-coding
unique_peak2-33046-0-11--4.42509343119537-2.83420869758413	chr10	75232946	75233571	+	0	NA	TTS (NM_010027)	TTS (NM_010027)	2861	NM_010027	13202	Mm.298947	NM_010027	ENSMUSG00000001666	Ddt	C78655	D-dopachrome tautomerase	protein-coding
common_peak1-7459-25-28-0.00386891021753399-0.304839791830758	chr1	90603000	90604208	+	0	NA	Intergenic	Intergenic	-4838	NM_177305	320982	Mm.27968	NM_177305	ENSMUSG00000049866	Arl4c	A630084M22Rik|Arl7|LAK	ADP-ribosylation factor-like 4C	protein-coding
common_peak2-29822-11-14--0.398197011356905-0.379391706698377	chr6	91688874	91689446	+	0	NA	intron (NM_009320, intron 6 of 14)	PB1D7|SINE|Alu	55099	NM_009320	21366	Mm.395650	NM_009320	ENSMUSG00000030096	Slc6a6	AA589629|C80501|Taut	solute carrier family 6 (neurotransmitter transporter, taurine), member 6	protein-coding
common_peak1-11332-29-46--0.442298771062527-0.626414924887874	chr15	85969780	85970760	+	0	NA	3' UTR (NM_145475, exon 13 of 13)	3' UTR (NM_145475, exon 13 of 13)	46301	NM_145475	223753	Mm.222685	NM_145475	ENSMUSG00000035891	Cerk	AI848610|D330016D08Rik|mKIAA1646	ceramide kinase	protein-coding
common_peak1-8387-43-90--0.725231454674994-2.15379281459257	chr10	62791251	62793094	+	0	NA	intron (NM_001159589, intron 3 of 7)	B3A|SINE|B2	9608	NM_019812	93759	Mm.351459	NM_019812	ENSMUSG00000020063	Sirt1	AA673258|SIR2L1|Sir2|Sir2a|Sir2alpha	sirtuin 1	protein-coding
common_peak2-21897-42-44-0.250476231537509-0.522994948702178	chr12	4233673	4234861	+	0	NA	promoter-TSS (NM_134046)	promoter-TSS (NM_134046)	27	NM_134046	52504	Mm.70546	NM_134046	ENSMUSG00000020652	Cenpo	2810429O05Rik|8430427C03Rik|D12Ertd482e	centromere protein O	protein-coding
common_peak2-19728-17-30--0.735899972181837-0.841847921495509	chr1	72306942	72307830	+	0	NA	intron (NM_023523, intron 7 of 7)	intron (NM_023523, intron 7 of 7)	23502	NM_023523	111175	Mm.281738	NM_023523	ENSMUSG00000026189	Pecr	2400003B18Rik|TERP	peroxisomal trans-2-enoyl-CoA reductase	protein-coding
unique_peak2-34496-3-10--1.87341470859657-1.75805390616669	chr14	46389967	46390622	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-112476	NM_001042719	114874	Mm.121918	NM_176845	ENSMUSG00000037697	Ddhd1	PA-PLA1	DDHD domain containing 1	protein-coding
common_peak2-30500-8-27--1.80213250411003-2.66623981987189	chr7	64127203	64128003	+	0	NA	intron (NM_008074, intron 5 of 9)	intron (NM_008074, intron 5 of 9)	514638	NM_008074	14407	Mm.434343	NM_008074		Gabrg3	B230362M20Rik|Gabrg-3	gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3	protein-coding
common_peak1-10150-42-48-0.127619483751976-0.377714458142987	chr13	35741311	35742609	+	0	NA	Intergenic	Intergenic	-9771	NM_009881	12593	Mm.29002	NM_009881	ENSMUSG00000059288	Cdyl	AI325931	chromodomain protein, Y chromosome-like	protein-coding
common_peak1-9609-57-84--0.143357896058773-0.36713912391627	chr11	120597578	120598753	+	0	NA	Intergenic	RLTR26|LTR|ERVK	-4830	NM_007621	12409	Mm.21454	NM_007621	ENSMUSG00000025150	Cbr2	MLCR	carbonyl reductase 2	protein-coding
unique_peak2-36031-3-6--1.22133801201688-1.08602067057793	chr19	43519340	43519637	+	0	NA	intron (NM_031396, intron 1 of 10)	intron (NM_031396, intron 1 of 10)	4562	NM_031396	83674	Mm.329864	NM_031396	ENSMUSG00000025189	Cnnm1	AI846314|Acdp1|CLP-1	cyclin M1	protein-coding
common_peak1-16128-32-33-0.191629177969321-0.409729630423047	chr5	67847085	67848153	+	0	NA	Intergenic	Intergenic	-7518	NR_110363	320479	Mm.387187	NR_015582		C330024D21Rik	-	RIKEN cDNA C330024D21 gene	ncRNA
unique_peak2-34180-2-6--1.72480917832092-1.26211192963361	chr13	34682989	34683406	+	0	NA	Intergenic	Lx7|LINE|L1	61353	NM_025831	66895	Mm.28943	NM_025831	ENSMUSG00000021411	Pxdc1	1300014I06Rik	PX domain containing 1	protein-coding
common_peak1-14790-57-73-0.0565796744499787-0.324195113983386	chr3	89772817	89774500	+	0	NA	Intergenic	B1_Mur3|SINE|Alu	-6404	NM_001081182	54667	Mm.30455	NM_001081182	ENSMUSG00000060671	Atp8b2	Id	ATPase, class I, type 8B, member 2	protein-coding
common_peak1-16336-41-42-0.274883950146562-0.532475415427916	chr5	117362554	117364008	+	0	NA	Intergenic	RSINE1|SINE|B4	202721	NM_001122666	71954	Mm.34456	NM_178622	ENSMUSG00000066900	Suds3	2400003N08Rik|2410008L21Rik|AU067672|mSds3	suppressor of defective silencing 3 homolog (S. cerevisiae)	protein-coding
unique_peak2-36136-4-7--1.02346051385325-1.09384600808989	chr2	15048576	15048912	+	0	NA	Intergenic	Intergenic	71755	NM_029466	75869	Mm.174068	NM_029466		Arl5b	4930587A11Rik|AW146430|Arl8	ADP-ribosylation factor-like 5B	protein-coding
common_peak2-25032-46-69--0.231287073696165-0.437489091603667	chr18	25629558	25631408	+	0	NA	Intergenic	Intergenic	282001	NM_133195	108013	Mm.266435	NM_133195	ENSMUSG00000024268	Celf4	A230070D14Rik|BRUNOL-4|Brul4|Brunol4|C130060B05Rik	CUGBP, Elav-like family member 4	protein-coding
common_peak2-24260-62-87--0.0486801598352127-0.306080045305055	chr16	92693620	92696397	+	0	NA	intron (NM_001111022, intron 3 of 6)	intron (NM_001111022, intron 3 of 6)	2566	NM_001111023	12394	Mm.4081	NM_009821	ENSMUSG00000022952	Runx1	AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b	runt related transcription factor 1	protein-coding
common_peak1-19138-10-10--0.103016273628528-0.301029995663987	chr9	83548301	83548760	+	0	NA	Intergenic	Intergenic	-36552	NR_046066	100039222	Mm.405596	NR_046066		Gm2109	-	predicted gene 2109	ncRNA
common_peak2-23292-48-97--0.643782692880394-1.88194491635449	chr15	31530050	31531780	+	0	NA	promoter-TSS (NM_026546)	promoter-TSS (NM_026546)	644	NM_007637	12465	Mm.282158	NM_007637	ENSMUSG00000022234	Cct5	Ccte|TCPE|mKIAA0098	chaperonin containing Tcp1, subunit 5 (epsilon)	protein-coding
common_peak1-7468-27-20-0.599228528116475-0.90781512069806	chr1	161250332	161251356	+	0	NA	intron (NM_011931, intron 15 of 19)	intron (NM_011931, intron 15 of 19)	-19594	NR_028518	100217414	Mm.450690	NR_028518		Scarna3a	MBI-114	small Cajal body-specific RNA 3A	ncRNA
unique_peak1-3256-20-1-3.48807478459119-5.43827864561946	chr18	65220209	65220992	+	0	NA	intron (NM_031881, intron 1 of 29)	intron (NM_031881, intron 1 of 29)	37419	NM_031881	83814	Mm.98668	NM_031881	ENSMUSG00000024589	Nedd4l	1300012C07Rik|Nedd4-2|Nedd4b	neural precursor cell expressed, developmentally down-regulated gene 4-like	protein-coding
common_peak1-18346-16-21--0.341167976369236-0.392630012299441	chr8	69395136	69395883	+	0	NA	intron (NM_001163564, intron 2 of 7)	intron (NM_001163564, intron 2 of 7)	11393	NM_001163564	234344	Mm.334561	NM_001163564	ENSMUSG00000014907	Naf1	Gm174	nuclear assembly factor 1 homolog (S. cerevisiae)	protein-coding
common_peak2-19645-20-25--0.212364933549899-0.342639663781856	chr1	43167659	43168597	+	0	NA	exon (NM_133818, exon 3 of 4)	exon (NM_133818, exon 3 of 4)	12573	NM_133818	98404	Mm.28817	NM_133818	ENSMUSG00000010290	AI597479	-	expressed sequence AI597479	protein-coding
unique_peak2-37089-3-8--1.58390809140159-1.39487600375387	chr3	152355387	152355887	+	0	NA	Intergenic	Intergenic	-21427	NM_178016	329777	Mm.331447	NM_025662	ENSMUSG00000039047	Pigk	3000001O05Rik	phosphatidylinositol glycan anchor biosynthesis, class K	protein-coding
common_peak2-28568-15-20--0.380152672223105-0.397739447719386	chr5	8052110	8052940	+	0	NA	intron (NM_025618, intron 1 of 7)	intron (NM_025618, intron 1 of 7)	-4017	NM_001080974	109552	Mm.96211	NM_025618	ENSMUSG00000003161	Sri	2210417O06Rik|2900070H08Rik|Sor	sorcin	protein-coding
unique_peak2-35830-3-10--1.87341470859657-1.75805390616669	chr18	66223154	66223718	+	0	NA	intron (NM_178793, intron 10 of 10)	ORR1D1-int|LTR|MaLR	-61147	NM_001172062	70361	Mm.290857	NM_027400	ENSMUSG00000041891	Lman1	2610020P13Rik|AI326273|AU043785|C730041J05|ERGIC53|F5F8D|MCFD1|MR60|P58|gp58	lectin, mannose-binding, 1	protein-coding
common_peak1-17484-10-21--1.10301627362853-1.16735254179725	chr7	24530070	24530512	+	0	NA	Intergenic	Intergenic	-8639	NM_207548	404291	Mm.160375	NM_207548	ENSMUSG00000090411	Vmn1r174	V1rd22	vomeronasal 1 receptor 174	protein-coding
common_peak1-17718-25-14-0.954959309736587-1.46151065785802	chr7	79779964	79781097	+	0	NA	Intergenic	Intergenic	-329049	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding
unique_peak1-457-11-3-1.50869358425161-1.95434855131066	chr1	169702716	169703415	+	0	NA	intron (NM_033652, intron 2 of 7)	L1_Mus3|LINE|L1	83376	NM_033652	110648	Mm.330081	NM_033652	ENSMUSG00000026686	Lmx1a	Lmx1.1|dr|dreher|sst	LIM homeobox transcription factor 1 alpha	protein-coding
common_peak2-20416-25-29--0.0450406902634128-0.301029995663982	chr10	25929654	25930574	+	0	NA	Intergenic	B4|SINE|B4	-19399	NM_001013766	268288	Mm.213322	NM_001013766	ENSMUSG00000051354	Samd3	Gm623	sterile alpha motif domain containing 3	protein-coding
unique_peak2-35366-4-8--1.19338551529556-1.21878474469819	chr17	27056840	27057213	+	0	NA	intron (NM_053173, intron 1 of 10)	MT2B2|LTR|ERVL	2990	NM_053173	16580	Mm.491138	NM_016761	ENSMUSG00000024301	Kifc5b	Hset|KNSL2|Kifc5a	kinesin family member C5B	protein-coding
common_peak1-16092-30-40--0.187876595126211-0.346766333527252	chr5	64802347	64803289	+	0	NA	Intergenic	MTD|LTR|MaLR	56363	NR_040681	69999	Mm.261413	NR_040681		1700027F09Rik	-	RIKEN cDNA 1700027F09 gene	ncRNA
common_peak2-24818-51-91--0.44863813045444-1.09572805394914	chr17	70848445	70850198	+	0	NA	intron (NM_027712, intron 1 of 9)	intron (NM_027712, intron 1 of 9)	-22129	NM_001128180	224997	Mm.311840	NM_027712	ENSMUSG00000003279	Dlgap1	4933422O14Rik|9630002F18|AI845682|AI848168|BB075781|D17Bwg0511e|GKAP/SAPAP|GKPA/SAPAP|Gkap|Sapap1|mKIAA4162	discs, large (Drosophila) homolog-associated protein 1	protein-coding
unique_peak1-4627-11-4-1.18676548936425-1.68134727924692	chr3	81135804	81136328	+	0	NA	Intergenic	Intergenic	295728	NM_019971	54635	Mm.331089	NM_019971	ENSMUSG00000028019	Pdgfc	1110064L01Rik|AI647969|PDGF-C	platelet-derived growth factor, C polypeptide	protein-coding
common_peak1-12409-26-19-0.6059709972711-0.841847921495509	chr17	72918338	72919717	+	0	NA	intron (NM_007439, intron 1 of 28)	intron (NM_007439, intron 1 of 28)	34620	NM_007439	11682	Mm.311854	NM_007439	ENSMUSG00000055471	Alk	CD246|Tcrz	anaplastic lymphoma kinase	protein-coding
common_peak2-26738-6-7--0.434601889619698-0.97990265578305	chr2	132099226	132099597	+	0	NA	intron (NM_138651, intron 1 of 12)	RSINE1|SINE|B4	10527	NM_138651	110911	Mm.284503	NM_138651	ENSMUSG00000058793	Cds2	5730450N06Rik|5730460C18Rik|AI854580|D2Wsu127e	CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2	protein-coding
unique_peak1-4199-16-2-2.53330114154691-3.78760380288747	chr2	118511975	118512685	+	0	NA	intron (NM_001145854, intron 2 of 9)	MTD|LTR|MaLR	9348	NM_001145854	214230	Mm.241857	NM_001033254	ENSMUSG00000074923	Pak6	4732456M09	p21 protein (Cdc42/Rac)-activated kinase 6	protein-coding
common_peak2-27027-93-174--0.34014124832606-1.20503843361496	chr2	174329455	174331234	+	0	NA	Intergenic	Intergenic	-31902	NM_025531	66390	Mm.182294	NM_025531	ENSMUSG00000016257	Slmo2	2310042G06Rik|AA407013	slowmo homolog 2 (Drosophila)	protein-coding
common_peak1-9942-22-33--0.440178736162935-0.541406350295756	chr12	110485473	110486303	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-179461	NM_001163175	380785	Mm.342085	NM_001163175	ENSMUSG00000040867	Begain	BM948371|Gm897	brain-enriched guanylate kinase-associated	protein-coding
unique_peak1-6124-8-0-3.00522241794757-2.70926996097583	chr6	129222941	129223386	+	0	NA	intron (NM_001033122, intron 1 of 4)	intron (NM_001033122, intron 1 of 4)	2224	NM_001033122	12515	Mm.74745	NM_001033122	ENSMUSG00000030156	Cd69	5830438K24Rik|AI452015|AIM|VEA	CD69 antigen	protein-coding
common_peak1-13317-40-49-0.0151194929763738-0.309716464454027	chr19	42147003	42148440	+	0	NA	Intergenic	Intergenic	13139	NM_198108	226123	Mm.259441	NM_198108	ENSMUSG00000049670	Morn4	-	MORN repeat containing 4	protein-coding
unique_peak1-274-9-0-3.18961340640422-3.01029995663981	chr1	98037713	98038331	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-119687	NR_040467	73454	Mm.396229	NR_040467		1700063A18Rik	-	RIKEN cDNA 1700063A18 gene	ncRNA
common_peak1-11554-31-46--0.329350180864514-0.513362016391488	chr16	10991770	10993075	+	0	NA	intron (NM_019980, intron 1 of 3)	intron (NM_019980, intron 1 of 3)	792	NM_019980	56722	Mm.294753	NM_019980	ENSMUSG00000022500	Litaf	3222402J11Rik|C85531|N4WBP3|TBX1	LPS-induced TN factor	protein-coding
common_peak1-18465-10-9-0.0344872501214071-1.05503135781948	chr8	84270065	84270595	+	0	NA	intron (NM_001297593, intron 4 of 23)	B1_Mur1|SINE|Alu	403869	NM_001297593	234515	Mm.324468	NM_001024617	ENSMUSG00000037940	Inpp4b	E130107I17Rik	inositol polyphosphate-4-phosphatase, type II	protein-coding
common_peak1-12051-50-79--0.28098777840841-0.554459000578111	chr17	21961745	21963213	+	0	NA	intron (NM_029281, intron 2 of 4)	B1_Mus1|SINE|Alu	20247	NM_029281	75424	Mm.271252	NM_029281	ENSMUSG00000069743	Zfp820	2610036F08Rik	zinc finger protein 820	protein-coding
common_peak1-13929-26-29-0.0210084965499435-0.304710633611964	chr2	85037145	85038042	+	0	NA	promoter-TSS (NM_001033346)	promoter-TSS (NM_001033346)	-737	NM_001033346	241528	Mm.291095	NM_001033346	ENSMUSG00000075224	Lrrc55	A330097E02Rik|Gm351	leucine rich repeat containing 55	protein-coding
common_peak1-17014-10-12--0.344024373132323-0.340565874754526	chr6	90995670	90996186	+	0	NA	intron (NM_018815, intron 20 of 39)	intron (NM_018815, intron 20 of 39)	70892	NM_018815	54563	Mm.28162	NM_018815	ENSMUSG00000030091	Nup210	9830001L10|AI836801|Pom210|gp190|gp210	nucleoporin 210	protein-coding
common_peak2-31750-27-34--0.137737066049731-0.314192449397093	chr9	20492239	20493377	+	0	NA	intron (NM_173777, intron 1 of 5)	B1_Mur4|SINE|Alu	36234	NM_023371	23988	Mm.7906	NM_023371	ENSMUSG00000032171	Pin1	0610025L01Rik|D9Bwg1161e	protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1	protein-coding
unique_peak2-33290-7-9--0.522837264589173-1.05908390183068	chr11	96141119	96141568	+	0	NA	Intergenic	Intergenic	-1876	NM_010461	15416	Mm.4822	NM_010461	ENSMUSG00000056648	Hoxb8	Hox-2.4	homeobox B8	protein-coding
common_peak2-20060-47-34-0.805558407821581-1.99054019639513	chr1	151676600	151677610	+	0	NA	3' UTR (NM_008869, exon 18 of 18)	3' UTR (NM_008869, exon 18 of 18)	131309	NM_008869	18783	Mm.4186	NM_008869	ENSMUSG00000056220	Pla2g4a	Pla2g4|cPLA2|cPLA2alpha	phospholipase A2, group IVA (cytosolic, calcium-dependent)	protein-coding
unique_peak2-33184-4-8--1.19338551529556-1.21878474469819	chr10	96620692	96621076	+	0	NA	Intergenic	Lx9|LINE|L1	122482	NR_045358	75301	Mm.108650	NR_045358		4930556N09Rik	-	RIKEN cDNA 4930556N09 gene	ncRNA
common_peak2-26047-6-6--0.241956811677302-0.947717972411649	chr2	25149359	25149691	+	0	NA	intron (NM_001242940, intron 2 of 3)	intron (NM_001242940, intron 2 of 3)	2785	NM_001242940	320354	Mm.445875	NM_001242940		Grin1os	E130003G02Rik	glutamate receptor, ionotropic, NMDA1 (zeta 1), opposite strand	protein-coding
common_peak1-17084-29-6-2.30493515855751-5.23041074693956	chr6	108704440	108705278	+	0	NA	Intergenic	RLTR40|LTR|ERVK	-28194	NM_026011	67166	Mm.271178	NM_026011	ENSMUSG00000030105	Arl8b	2610313E07Rik|3100002J04Rik|Arl10c|gie1	ADP-ribosylation factor-like 8B	protein-coding
unique_peak1-2582-8-2-1.42025991722641-1.65811743852845	chr16	30406142	30406604	+	0	NA	Intergenic	Lx8|LINE|L1	-17757	NM_001128096	224088	Mm.8924	NM_001128094	ENSMUSG00000022533	Atp13a3	AU022875|Gm1745|Gm541|Gm542	ATPase type 13A3	protein-coding
common_peak1-8150-18-15-0.312919151228352-0.456667090758524	chr1	191453464	191454390	+	0	NA	Intergenic	Intergenic	58038	NM_001081363	108000	Mm.129746	NM_001081363	ENSMUSG00000026605	Cenpf	6530404A22Rik|AI325968|CENF|Lek1|PRO1779|mitosin	centromere protein F	protein-coding
common_peak2-32254-10-12--0.344024373132323-0.340565874754526	chrX	7762666	7763131	+	0	NA	exon (NM_007898, exon 5 of 5)	exon (NM_007898, exon 5 of 5)	7740	NM_007898	13595	Mm.27183	NM_007898	ENSMUSG00000031168	Ebp	AI255399|Pabp|Td|mSI	phenylalkylamine Ca2+ antagonist (emopamil) binding protein	protein-coding
common_peak1-12363-15-10-0.552733131918359-0.604422558181019	chr17	62689487	62690244	+	0	NA	Intergenic	Intergenic	540801	NM_207654	13640	Mm.7978	NM_010109		Efna5	AL-1|AV158822|EFL-5|Ephrin-A5|Epl7|LERK-7|RAGS	ephrin A5	protein-coding
unique_peak1-1084-9-3-1.18961340640422-1.57096726280955	chr11	87008144	87008659	+	0	NA	intron (NM_197987, intron 17 of 23)	B1_Mus2|SINE|Alu	67824	NM_197987	68729	Mm.17436	NM_197987	ENSMUSG00000018548	Trim37	1110032A10Rik|2810004E07Rik|AI848587|AU043018|MUL|TEF3|mKIAA0898	tripartite motif-containing 37	protein-coding
common_peak1-13222-29-18-0.864362567171526-1.50628532113231	chr19	24422556	24423830	+	0	NA	intron (NM_008846, intron 12 of 14)	intron (NM_008846, intron 12 of 14)	-68117	NM_008044	14297	Mm.7319	NM_008044	ENSMUSG00000059363	Fxn	FA|FARR|Frda|X25	frataxin	protein-coding
common_peak2-24775-17-27--0.589058583852566-0.604689589251113	chr17	56764503	56765401	+	0	NA	intron (NM_028782, intron 1 of 17)	intron (NM_028782, intron 1 of 17)	1374	NM_028782	74142	Mm.329136	NM_028782	ENSMUSG00000041168	Lonp1	1200017E13Rik|LON|Prss15	lon peptidase 1, mitochondrial	protein-coding
common_peak1-17789-20-14-0.581184188982674-0.690311289528838	chr7	98384360	98385455	+	0	NA	intron (NM_011807, intron 1 of 22)	intron (NM_011807, intron 1 of 22)	145611	NM_011807	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
common_peak2-20251-15-12-0.311725032414564-0.425539671739611	chr1	184277171	184277685	+	0	NA	Intergenic	Intergenic	-5691	NM_175127	67948	Mm.30737	NM_175127	ENSMUSG00000047539	Fbxo28	4833428J17Rik|5730505P19Rik|D1Ertd578e|Fbx28|mKIAA0483	F-box protein 28	protein-coding
unique_peak1-5724-7-0-2.79909083029819-2.40823996531185	chr6	42473581	42474075	+	0	NA	Intergenic	L1MA6|LINE|L1	15191	NM_001081301	546896	Mm.439626	NM_001081301	ENSMUSG00000071494	Olfr455	EG546896|MOR0-17_p|MOR0-2P|MORO-2|Olfr455-ps1	olfactory receptor 455	protein-coding
common_peak2-20700-14-15--0.100783839642355-0.301029995663982	chr10	93332110	93332709	+	0	NA	intron (NM_019648, intron 7 of 11)	B1_Mur3|SINE|Alu	21538	NM_019648	56307	Mm.289329	NM_019648	ENSMUSG00000036112	Metap2	4930584B20Rik|A930035J23Rik|AI047573|AL024412|AU014659|Amp2|Mnpep|p67|p67eIF2	methionine aminopeptidase 2	protein-coding
common_peak2-27882-13-21--0.680959587999529-0.607095980551316	chr4	109117430	109118078	+	0	NA	TTS (NM_001145948)	TTS (NM_001145948)	29502	NM_001145948	230603	Mm.33091	NM_153392	ENSMUSG00000028555	Ttc39a	4922503N01Rik	tetratricopeptide repeat domain 39A	protein-coding
common_peak1-15944-33-51--0.369102155615563-0.590471533980013	chr5	29434625	29435745	+	0	NA	Intergenic	Lx8|LINE|L1	-87348	NM_021470	56874	Mm.87352	NM_021470	ENSMUSG00000029130	Rnf32	1700009J01Rik|2700025B22Rik|4930542N22Rik|Lmbr2	ring finger protein 32	protein-coding
unique_peak1-5889-7-2-1.21412832957703-1.45399745587252	chr6	86822507	86823020	+	0	NA	intron (NM_001040106, intron 1 of 20)	B2_Mm2|SINE|B2	23252	NM_001040106	269774	Mm.221038	NM_177762	ENSMUSG00000057230	Aak1	5530400K14Rik|9630042K20|AU067724|AU067726|BC028270|C79663|D6Ertd245e|R75501|mKIAA1048	AP2 associated kinase 1	protein-coding
unique_peak1-1022-8-5-0.420259917226415-1.10484139239135	chr11	75248756	75249299	+	0	NA	intron (NM_008878, intron 8 of 9)	intron (NM_008878, intron 8 of 9)	3976	NM_008878	18816	Mm.279733	NM_008878	ENSMUSG00000038224	Serpinf2	AI747498|Pli|Serpimf2	serine (or cysteine) peptidase inhibitor, clade F, member 2	protein-coding
unique_peak1-6774-7-0-2.79909083029819-2.40823996531185	chr8	61715688	61716147	+	0	NA	Intergenic	Lx9|LINE|L1	325365	NM_173411	234290	Mm.39244	NM_173411	ENSMUSG00000049946	BC030500	-	cDNA sequence BC030500	protein-coding
unique_peak2-39420-4-8--1.19338551529556-1.21878474469819	chr9	41532862	41533379	+	0	NA	Intergenic	Intergenic	143111	NR_029822	387236		NR_029822	miRBase:MI0000725	Mir125b-1	Mirn125b|Mirn125b-1	microRNA 125b-1	ncRNA
common_peak1-8272-9-12--0.510826311736872-0.394412252720706	chr10	24639242	24639656	+	0	NA	intron (NM_007482, intron 3 of 7)	intron (NM_007482, intron 3 of 7)	7827	NM_007482	11846	Mm.154144	NM_007482	ENSMUSG00000019987	Arg1	AI|AI256583|Arg-1|PGIF	arginase, liver	protein-coding
common_peak2-23511-7-5-0.214128329577033-1.01466476204226	chr15	76590295	76590712	+	0	NA	intron (NM_198420, intron 2 of 10)	ORR1E|LTR|MaLR	-36228	NM_176828	223665	Mm.291713	NM_145472	ENSMUSG00000079002	C030006K11Rik	1110033I13Rik	RIKEN cDNA C030006K11 gene	protein-coding
unique_peak2-35764-6-10--0.894033508256995-1.21398586181642	chr18	42261551	42262111	+	0	NA	intron (NM_172966, intron 2 of 7)	intron (NM_172966, intron 2 of 7)	48467	NM_001146299	269016	Mm.45472	NM_172966	ENSMUSG00000057719	Sh3rf2	2310046K19|9130023G24Rik|AI452083|Ppp1r39|RNF158	SH3 domain containing ring finger 2	protein-coding
common_peak2-22741-10-7-0.356415345008769-1.12966497611638	chr13	110230314	110230805	+	0	NA	intron (NM_011056, intron 3 of 16)	intron (NM_011056, intron 3 of 16)	115621	NR_030644	100124489		NR_030644		Mir582	Mirn582|mmu-mir-582	microRNA 582	ncRNA
common_peak1-15657-34-36-0.172615161372316-0.401350871931209	chr4	135872936	135874174	+	0	NA	intron (NM_001277123, intron 3 of 9)	B1_Mus1|SINE|Alu	6698	NM_001277123	74326	Mm.31051	NM_028871	ENSMUSG00000066037	Hnrnpr	2610003J05Rik|2610528B01Rik|Hnrpr	heterogeneous nuclear ribonucleoprotein R	protein-coding
unique_peak1-6348-13-6-0.971117108580164-1.01572999746118	chr7	58801052	58801798	+	0	NA	intron (NM_001271879, intron 5 of 20)	intron (NM_001271879, intron 5 of 20)	35026	NM_001271879	233246	Mm.254431	NM_177694	ENSMUSG00000055489	Ano5	9330162L24|Gdd1|Tmem16e	anoctamin 5	protein-coding
common_peak2-31329-18-20--0.0793982715504091-0.301029995663976	chr8	83441782	83442467	+	0	NA	Intergenic	ORR1C1|LTR|MaLR	-37706	NM_001301298	14388	Mm.277409	NM_021356	ENSMUSG00000031714	Gab1	AA408973|AW107238	growth factor receptor bound protein 2-associated protein 1	protein-coding
common_peak2-25009-11-15--0.491306415748387-0.435191258261915	chr18	14782364	14783079	+	0	NA	Intergenic	Intergenic	58702	NM_001161369	268996	Mm.31761	NM_009280	ENSMUSG00000037013	Ss18	D130059H17|Ssxt|Syt	synovial sarcoma translocation, Chromosome 18	protein-coding
common_peak2-28858-5-7--0.704380336005853-1.01466476204226	chr5	74067763	74068194	+	0	NA	intron (NM_178387, intron 10 of 12)	intron (NM_178387, intron 10 of 12)	25359	NM_178387	73472	Mm.87067	NM_178387	ENSMUSG00000029155	Spata18	1700067I02Rik	spermatogenesis associated 18	protein-coding
common_peak2-30556-34-23-0.79710602628011-1.52482195715361	chr7	78782730	78783613	+	0	NA	Intergenic	Intergenic	668310	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding
common_peak2-28673-40-81--0.698576321866986-1.79459601430274	chr5	32132830	32133955	+	0	NA	intron (NM_181281, intron 4 of 10)	intron (NM_181281, intron 4 of 10)	132969	NM_181282	107976	Mm.482126	NM_144541	ENSMUSG00000052139	Bre	6030405P19Rik|AI429776|B830038C02Rik	brain and reproductive organ-expressed protein	protein-coding
unique_peak1-5799-17-4-1.89636824331768-2.60953805094651	chr6	65590761	65591530	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-30460	NM_172399	68169	Mm.52392	NM_172399	ENSMUSG00000049001	Ndnf	A930038C07Rik|epidermacan	neuron-derived neurotrophic factor	protein-coding
unique_peak1-5598-37-5-2.94103057076466-8.54919107256478	chr6	54279316	54280500	+	0	NA	3' UTR (NM_030024, exon 2 of 2)	3' UTR (NM_030024, exon 2 of 2)	2902	NM_030024	78004	Mm.41984	NM_030024	ENSMUSG00000045725	Prr15	E130201N16Rik|G90	proline rich 15	protein-coding
unique_peak1-2788-11-0-3.50869358425161-3.61235994796777	chr17	13478953	13479501	+	0	NA	Intergenic	Intergenic	56098	NM_001167913	236574		NM_001167913		Smok2b	Gm1847|Smok+129	sperm motility kinase 2B	protein-coding
common_peak2-23064-90-132--0.000977409559038023-0.301849421159484	chr14	73142560	73144190	+	0	NA	Intergenic	Intergenic	-33565	NM_207636	319448	Mm.205421	NM_207636	ENSMUSG00000033487	Fndc3a	1700094E19Rik|D14Ertd453e|F730017H24Rik|Fndc3|sys	fibronectin type III domain containing 3A	protein-coding
unique_peak2-34497-6-8--0.60452689106201-1.03789460276074	chr14	46517044	46517498	+	0	NA	Intergenic	Lx7|LINE|L1	-186431	NR_002875	218963	Mm.282093	NR_002875		Gm1821	-	ubiquitin pseudogene	pseudo
common_peak2-27089-31-84--1.18415226532458-4.37155348239207	chr3	96239267	96240400	+	0	NA	intron (NM_001256180, intron 3 of 4)	intron (NM_001256180, intron 3 of 4)	16396	NM_001256181	329716	Mm.275223	NM_183223	ENSMUSG00000046317	BC107364	D730018G16	cDNA sequence BC107364	protein-coding
common_peak1-9244-12-10-0.189344366450341-0.386243247519795	chr11	86588547	86589093	+	0	NA	intron (NM_026191, intron 14 of 17)	RSINE1|SINE|B4	-17826	NM_001003908	67300	Mm.254588	NM_001003908	ENSMUSG00000047126	Cltc	3110065L21Rik|CHC|R74732	clathrin, heavy polypeptide (Hc)	protein-coding
common_peak2-28818-6-20--1.82691931239846-2.0280102512677	chr5	65458032	65458619	+	0	NA	Intergenic	Intergenic	-64145	NM_175174	71778	Mm.10281	NM_175174	ENSMUSG00000054920	Klhl5	1300013C10Rik	kelch-like 5	protein-coding
unique_peak1-6182-7-2-1.21412832957703-1.45399745587252	chr6	145984820	145985259	+	0	NA	Intergenic	Intergenic	102372	NM_010656	16651	Mm.49689	NM_010656	ENSMUSG00000030255	Sspn	Krag	sarcospan	protein-coding
common_peak2-31267-17-15-0.218296338205038-0.403453972741633	chr8	71380587	71381403	+	0	NA	Intergenic	B4A|SINE|B4	-23459	NM_008509	16956	Mm.1514	NM_008509	ENSMUSG00000015568	Lpl	-	lipoprotein lipase	protein-coding
unique_peak2-34131-2-13--2.72480917832092-2.79529063155376	chr13	22040870	22041224	+	0	NA	intron (NM_183014, intron 3 of 5)	intron (NM_183014, intron 3 of 5)	4084	NM_183014	193452	Mm.187446	NM_183014	ENSMUSG00000006720	Zfp184	4930500C15Rik	zinc finger protein 184 (Kruppel-like)	protein-coding
common_peak2-31889-3-7--1.41398308995928-1.23214870625617	chr9	56417162	56417547	+	0	NA	Intergenic	B3|SINE|B2	115706	NM_181074	235402	Mm.246605	NM_181074	ENSMUSG00000049556	Lingo1	4930471K13Rik|AV148400|LERN1|LINGO-1|Lrrn6a|UNQ201	leucine rich repeat and Ig domain containing 1	protein-coding
common_peak2-30497-22-41--0.745033317691356-1.15174830603352	chr7	63936921	63937797	+	0	NA	Intergenic	L1Md_T|LINE|L1	442218	NM_021879	18431	Mm.137052	NM_021879	ENSMUSG00000030450	Oca2	D7H15S12|D7Icr28RN|D7Nic1|p	oculocutaneous albinism II	protein-coding
common_peak1-10390-32-62--0.698187904280257-1.44840522860438	chr13	96542425	96543596	+	0	NA	intron (NM_027711, intron 2 of 35)	intron (NM_027711, intron 2 of 35)	76135	NM_010170	14064	Mm.440952	NM_010170	ENSMUSG00000021675	F2rl2	F730031A08|PAR3	coagulation factor II (thrombin) receptor-like 2	protein-coding
common_peak2-20207-125-137-0.515300922281382-2.65429288663268	chr1	178317951	178319324	+	0	NA	Intergenic	L1Md_F3|LINE|L1	-113194	NM_176916	319455	Mm.338001	NM_176916	ENSMUSG00000055214	Pld5	B230365F16Rik	phospholipase D family, member 5	protein-coding
unique_peak2-33060-10-27--1.45093957704883-2.06249767704514	chr10	77165409	77166459	+	0	NA	intron (NM_001287074, intron 1 of 11)	MTD|LTR|MaLR	-3398	NR_026831	16697	Mm.482251	NR_026831		Gm10272	ENSMUSG00000069584|Krtap12-4	keratin associated protein 12-4	pseudo
common_peak2-19941-59-73-0.115910635243628-0.370598165309234	chr1	128416578	128417459	+	0	NA	intron (NM_001081756, intron 3 of 16)	intron (NM_001081756, intron 3 of 16)	-27514	NM_172484	210356	Mm.377234	NM_172484	ENSMUSG00000049690	Nckap5	8430408F21|D130011D22Rik|E030049G20Rik|Erih1|Erih2|Gm1548|Nap5	NCK-associated protein 5	protein-coding
common_peak1-9464-17-38--1.06710588065721-1.70296806472143	chr11	103966586	103967398	+	0	NA	Intergenic	Intergenic	-27204	NM_007762	12921	Mm.1892	NM_007762	ENSMUSG00000018634	Crhr1	CRFR1|Crhr	corticotropin releasing hormone receptor 1	protein-coding
common_peak2-21993-41-45-0.177586748791647-0.410818340144418	chr12	54719169	54719780	+	0	NA	intron (NM_013780, intron 3 of 11)	intron (NM_013780, intron 3 of 11)	369810	NM_013780	27386	Mm.247044	NM_013780	ENSMUSG00000021010	Npas3	4930423H22Rik|bHLHe12	neuronal PAS domain protein 3	protein-coding
common_peak2-24355-16-25--0.58217607587303-0.633951497070961	chr17	6270238	6271109	+	0	NA	intron (NM_001033178, intron 1 of 16)	CpG	203	NM_001033178	77106	Mm.381893	NM_001033178	ENSMUSG00000038141	Tmem181a	5930418K15Rik|C76977|Gpr178|Tmem181|mKIAA1423	transmembrane protein 181A	protein-coding
common_peak1-13511-36-29-0.572430490559236-1.05820747366651	chr2	94272836	94274018	+	0	NA	intron (NM_007466, intron 1 of 13)	intron (NM_007466, intron 1 of 13)	4877	NM_007466	11800	Mm.181824	NM_007466	ENSMUSG00000027193	Api5	AAC-11|AI196452	apoptosis inhibitor 5	protein-coding
unique_peak1-5559-7-2-1.21412832957703-1.45399745587252	chr5	146694155	146694675	+	0	NA	Intergenic	Intergenic	-2985	NM_007818	13112	Mm.332844	NM_007818	ENSMUSG00000056035	Cyp3a11	AI256190|Cyp3a|IIIAm1|Pcn	cytochrome P450, family 3, subfamily a, polypeptide 11	protein-coding
common_peak1-12032-41-51-0.000708986707568471-0.303138254425616	chr17	17373703	17374708	+	0	NA	Intergenic	RMER10A|LTR|ERVL	115858	NM_011765	22759	Mm.436633	NM_011765	ENSMUSG00000095990	Zfp97	NGD16-4	zinc finger protein 97	protein-coding
unique_peak1-5897-14-9-0.577288065470282-0.630231561310125	chr6	87243879	87244716	+	0	NA	intron (NM_054041, intron 3 of 17)	intron (NM_054041, intron 3 of 17)	41472	NM_054041	69538	Mm.232525	NM_054041	ENSMUSG00000033420	Antxr1	2310008J16Rik|2810405N18Rik|Antrx1|Tem8	anthrax toxin receptor 1	protein-coding
common_peak2-27309-53-80--0.198876990468696-0.417582018066374	chr3	63928673	63929487	+	0	NA	intron (NM_001104592, intron 3 of 4)	Lx5|LINE|L1	12322	NM_001104592	100125586	Mm.469888	NM_001104592	ENSMUSG00000043897	Vmn2r2	ENSMUSG00000043897	vomeronasal 2, receptor 2	protein-coding
unique_peak2-39369-6-6--0.241956811677302-0.947717972411649	chr9	13668928	13669338	+	0	NA	Intergenic	Intergenic	36962	NM_176836	72826	Mm.246174	NM_176836	ENSMUSG00000037808	Fam76b	2810485I05Rik|C78303	family with sequence similarity 76, member B	protein-coding
common_peak1-15206-84-63-0.934934058889025-4.45916339683792	chr4	43727670	43729976	+	0	NA	Intergenic	B4|SINE|B4	-9385	NM_019486	56015	Mm.377126	NM_019486	ENSMUSG00000046450	Olfr71	MOR262-4|mOR17	olfactory receptor 71	protein-coding
common_peak1-17967-11-22--1.0148683718054-1.11267835143409	chr7	131362274	131362946	+	0	NA	intron (NM_001252072, intron 1 of 1)	intron (NM_001252072, intron 1 of 1)	235915	NM_001252072	628779	Mm.40210	NM_001252072	ENSMUSG00000078591	Hs3st4	EG628779|Gm6915	heparan sulfate (glucosamine) 3-O-sulfotransferase 4	protein-coding
unique_peak1-4604-10-4-1.03448725012141-1.5150158574804	chr3	65273141	65273689	+	0	NA	Intergenic	MTD|LTR|MaLR	-58954	NM_178892	99929	Mm.246398	NM_178892	ENSMUSG00000034640	Tiparp	ARTD14|AW558171|PARP7	TCDD-inducible poly(ADP-ribose) polymerase	protein-coding
common_peak2-26974-19-28--0.455293668465885-0.518921928796332	chr2	167402600	167403476	+	0	NA	Intergenic	Intergenic	39311	NM_011427	20613	Mm.2093	NM_011427	ENSMUSG00000042821	Snai1	AI194338|Sna|Sna1|Snail|Snail1	snail family zinc finger 1	protein-coding
common_peak1-17299-9-21--1.26981821223308-1.37307999835977	chr6	137519402	137519881	+	0	NA	promoter-TSS (NM_001271587)	promoter-TSS (NM_001271587)	-111	NM_001271587	13860	Mm.235346	NM_007945	ENSMUSG00000015766	Eps8	AW261790	epidermal growth factor receptor pathway substrate 8	protein-coding
common_peak1-8144-27-25-0.291106232754144-0.488172498216822	chr1	191183553	191184404	+	0	NA	intron (NM_001281848, intron 1 of 5)	intron (NM_001281848, intron 1 of 5)	-15907	NM_001281847	16526	Mm.33304	NM_010607	ENSMUSG00000037624	Kcnk2	A430027H14Rik|AI848635|TREK-1	potassium channel, subfamily K, member 2	protein-coding
unique_peak2-35120-11-13--0.298661337805991-0.337263207250336	chr16	25465326	25465948	+	0	NA	Intergenic	Intergenic	178734	NM_175165	71338	Mm.126851	NM_175165	ENSMUSG00000048399	Tprg	5430420C16Rik|Tprg1	transformation related protein 63 regulated	protein-coding
common_peak1-9256-16-10-0.658832023630764-0.699649909729472	chr11	86853132	86853954	+	0	NA	intron (NM_025638, intron 7 of 9)	RSINE1|SINE|B4	34096	NM_025638	66569	Mm.281887	NM_025638	ENSMUSG00000061666	Gdpd1	2610020H15Rik	glycerophosphodiester phosphodiesterase domain containing 1	protein-coding
unique_peak1-7417-14-1-2.89921616035764-3.91338994363176	chrX	142297514	142298141	+	0	NA	Intergenic	Intergenic	-375645	NM_153319	27494	Mm.100068	NM_153319	ENSMUSG00000041688	Amot	CAG-2|D0Kist1|Sii6	angiomotin	protein-coding
unique_peak1-2444-19-4-2.08075923177432-3.05312482518673	chr15	101930271	101931023	+	0	NA	Intergenic	CpG	-2772	NM_153533	209039	Mm.29389	NM_153533	ENSMUSG00000037003	Tenc1	C1-ten|nep|nph	tensin like C1 domain-containing phosphatase	protein-coding
common_peak2-31410-8-8--0.164702583494742-1.00793137938329	chr8	92364233	92364620	+	0	NA	Intergenic	Intergenic	507725	NM_172913	244579	Mm.302755	NM_172913	ENSMUSG00000043668	Tox3	500-9|BC052044|C230068E13|CAGF9|Tnrc9	TOX high mobility group box family member 3	protein-coding
common_peak2-25395-46-76--0.368790597446099-0.710725903974579	chr19	5487807	5489686	+	0	NA	promoter-TSS (NM_027877)	promoter-TSS (NM_027877)	-410	NM_027877	71711	Mm.27697	NM_027877	ENSMUSG00000024906	Mus81	1200008A18Rik|AI182501|AW045863	MUS81 endonuclease homolog (yeast)	protein-coding
unique_peak2-38548-4-7--1.02346051385325-1.09384600808989	chr7	52169729	52170152	+	0	NA	intron (NM_001077264, intron 4 of 22)	PB1D7|SINE|Alu	14920	NM_007458	11771	Mm.6877	NM_007458	ENSMUSG00000060279	Ap2a1	Adtaa	adaptor-related protein complex 2, alpha 1 subunit	protein-coding
unique_peak2-38443-8-17--1.16470258349474-1.02063122982878	chr7	27731377	27732095	+	0	NA	Intergenic	CT-rich|Low_complexity|Low_complexity	-7331	NM_001101467	233005	Mm.291574	NM_001101467	ENSMUSG00000091867	Cyp2a22	EG233005	cytochrome P450, family 2, subfamily a, polypeptide 22	protein-coding
common_peak2-19849-7-9--0.522837264589173-1.05908390183068	chr1	91095639	91096096	+	0	NA	Intergenic	IAPLTR1_Mm|LTR|ERVK	-5740	NR_106129	102465771		NR_106129		Mir7669	mmu-mir-7669	microRNA mir-7669	ncRNA
common_peak1-11382-43-20-1.39024576274494-3.98923275154812	chr15	97581164	97582511	+	0	NA	intron (NM_001177810, intron 18 of 27)	intron (NM_001177810, intron 18 of 27)	16260	NM_001177810	223864	Mm.24028	NM_144850	ENSMUSG00000022469	Rapgef3	2310016P22Rik|9330170P05Rik|Epac|Epac1	Rap guanine nucleotide exchange factor (GEF) 3	protein-coding
unique_peak2-39256-2-7--1.91745425626332-1.45399745587252	chr8	117646399	117646868	+	0	NA	intron (NM_019573, intron 8 of 8)	B4|SINE|B4	584161	NM_001025577	17132	Mm.275549	NM_001025577		Maf	2810401A20Rik|A230108G15Rik|AW047063|c-maf	avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog	protein-coding
common_peak2-22714-13-13--0.0288828914198356-0.309074325783021	chr13	102905745	102906559	+	0	NA	Intergenic	Intergenic	-367980	NM_001077495	18708	Mm.259333	NM_001024955	ENSMUSG00000041417	Pik3r1	PI3K|p50alpha|p55alpha|p85alpha	phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)	protein-coding
common_peak1-17493-6-11--1.01956439034085-1.32595962126035	chr7	25155334	25155708	+	0	NA	exon (NM_008433, exon 1 of 9)	exon (NM_008433, exon 1 of 9)	239	NM_008433	16534	Mm.9911	NM_008433	ENSMUSG00000054342	Kcnn4	IK1|IKCA1|KCA4|KCa3.1|SK4|SKCas|mIKCa1	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4	protein-coding
common_peak1-12678-21-24--0.0743669245084888-0.301029995663979	chr18	37934586	37935473	+	0	NA	intron (NM_033595, intron 1 of 3)	B1F|SINE|Alu	9795	NM_033595	93724	Mm.247203	NM_033595	ENSMUSG00000023036	Pcdhga12	Pcdh13|pc2c	protocadherin gamma subfamily A, 12	protein-coding
unique_peak2-33781-6-7--0.434601889619698-0.97990265578305	chr11	119393372	119393854	+	0	NA	Intergenic	RSINE1|SINE|B4	15521	NM_008730	18164	Mm.5142	NM_008730	ENSMUSG00000025582	Nptx1	D11Bwg1004e|Np1	neuronal pentraxin 1	protein-coding
common_peak1-12078-11-24--1.13516260552311-1.3750876294627	chr17	24470385	24470935	+	0	NA	intron (NM_001031621, intron 4 of 29)	intron (NM_001031621, intron 4 of 29)	13537	NM_001031621	381072	Mm.328842	NM_001031621	ENSMUSG00000035435	Abca17	-	ATP-binding cassette, sub-family A (ABC1), member 17	protein-coding
common_peak2-22623-9-4-0.867685311516858-1.36011389749466	chr13	80940442	80940825	+	0	NA	Intergenic	Intergenic	-82050	NM_001042591	105171	Mm.423137	NM_001042591	ENSMUSG00000074794	Arrdc3	AI450344|mKIAA1376	arrestin domain containing 3	protein-coding
common_peak1-19057-8-5-0.420259917226415-1.10484139239135	chr9	66991452	66991805	+	0	NA	intron (NR_045748, intron 1 of 2)	intron (NR_045748, intron 1 of 2)	10260	NR_045748	100502636	Mm.412607	NR_045748		Gm19299	-	predicted gene, 19299	ncRNA
unique_peak1-347-12-8-0.478850983645327-0.562038191119709	chr1	135411148	135411800	+	0	NA	Intergenic	ORR1C1|LTR|MaLR	-90685	NM_011439	20668	Mm.8575	NM_011439	ENSMUSG00000070643	Sox13	AA407916|AW259412|AW540933|Sox-13	SRY (sex determining region Y)-box 13	protein-coding
common_peak2-20939-13-7-0.778472030637769-0.817533494790411	chr11	8674097	8674561	+	0	NA	Intergenic	Intergenic	-109791	NM_001083587	319939	Mm.337820	NM_001083587	ENSMUSG00000020422	Tns3	BC023928|F830010I22Rik|TEM6|Tens1	tensin 3	protein-coding
unique_peak1-887-8-1-2.00522241794757-2.05605744720049	chr11	32552862	32553353	+	0	NA	intron (NM_001271349, intron 1 of 11)	intron (NM_001271349, intron 1 of 11)	10552	NM_001271347	103583	Mm.28017	NM_134015	ENSMUSG00000020271	Fbxw11	2310065A07Rik|AA536858|BTRC2|BTRCP2|Fbxw1b|HOS	F-box and WD-40 domain protein 11	protein-coding
common_peak1-15024-7-8--0.370834171144123-1.00793137938329	chr3	117076895	117077415	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-13361	NM_177664	229791	Mm.140138	NM_177664	ENSMUSG00000044667	Lppr4	A330086D10|D3Bwg0562e|PRG-1|mKIAA0455	lipid phosphate phosphatase-related protein type 4	protein-coding
common_peak1-11057-19-9-1.08075923177432-1.37307999835977	chr15	55141797	55142713	+	0	NA	intron (NM_181277, intron 1 of 47)	intron (NM_181277, intron 1 of 47)	2950	NM_181277	12818	Mm.297859	NM_181277	ENSMUSG00000022371	Col14a1	5730412L22Rik|AW108078	collagen, type XIV, alpha 1	protein-coding
common_peak2-32078-19-10-0.943255708024389-1.16735254179725	chr9	96196251	96196681	+	0	NA	intron (NM_178667, intron 8 of 13)	B2_Mm2|SINE|B2	36799	NM_001184710	211586	Mm.17977	NM_178667	ENSMUSG00000032411	Tfdp2	1110029I05Rik|A330080J22Rik|DP-3|DP3	transcription factor Dp 2	protein-coding
common_peak1-11767-22-24-0.00342791531268016-0.305461879681376	chr16	43363019	43363882	+	0	NA	intron (NM_001285805, intron 4 of 10)	intron (NM_001285805, intron 4 of 10)	56859	NR_046026	626693	Mm.447083	NR_046026	ENSMUSG00000085499	Gm15713	OTTMUSG00000025617	predicted gene 15713	ncRNA
common_peak1-7686-63-110--0.356103275279517-0.885462932858964	chr1	80339613	80341182	+	0	NA	Intergenic	Intergenic	-3392	NM_016716	26554	Mm.12665	NM_016716	ENSMUSG00000004364	Cul3	AI467304|AW146203|mKIAA0617	cullin 3	protein-coding
common_peak2-19870-25-63--1.13815009465489-3.09530603560454	chr1	93162160	93163011	+	0	NA	intron (NM_026454, intron 4 of 9)	intron (NM_026454, intron 4 of 9)	15689	NM_026454	67921	Mm.337238	NM_026454	ENSMUSG00000034343	Ube2f	2510010F15Rik|AI851109	ubiquitin-conjugating enzyme E2F (putative)	protein-coding
common_peak2-21589-16-29--0.788626953340457-0.98872314135509	chr11	98412165	98413228	+	0	NA	5' UTR (NM_001166494, exon 1 of 7)	5' UTR (NM_001166494, exon 1 of 7)	285	NM_001166494	69376	Mm.55996	NM_027061	ENSMUSG00000017195	Zpbp2	1700017D11Rik|2610022C02Rik|ZPBPL	zona pellucida binding protein 2	protein-coding
common_peak1-7496-18-10-0.853487532591054-1.03889213727317	chr1	10286112	10286771	+	0	NA	Intergenic	Lx9|LINE|L1	-63690	NM_001102430	211673	Mm.229141	NM_001102430	ENSMUSG00000067851	Arfgef1	ARFGEP1|BIG1|D130059B05Rik|D730028O18Rik|P200	ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited)	protein-coding
common_peak1-17439-13-31--1.22152796936223-1.73082168901047	chr7	16286393	16286863	+	0	NA	Intergenic	MuRRS-int|LTR|ERV1	-49091	NM_145709	252829	Mm.222738	NM_145709		Obox5	C87544	oocyte specific homeobox 5	protein-coding
unique_peak2-33875-3-4--0.73591118484664-0.864171920961574	chr12	25165113	25165535	+	0	NA	Intergenic	RMER15|LTR|ERVL	-18122	NM_020614	21340	Mm.39082	NM_020614	ENSMUSG00000059669	Taf1b	4930408G01Rik|A230108M10Rik|TAFI68|Tafi86	TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B	protein-coding
unique_peak2-35848-5-11--1.28934283672701-1.477227296591	chr18	74778903	74779398	+	0	NA	intron (NM_201600, intron 5 of 38)	intron (NM_201600, intron 5 of 38)	-88372	NR_045368	73606	Mm.444734	NR_045368		1700120E14Rik	-	RIKEN cDNA 1700120E14 gene	ncRNA
common_peak2-22767-11-10-0.0492619656143161-0.31137425193576	chr14	27131675	27132178	+	0	NA	Intergenic	Intergenic	-45107	NR_038005	71106	Mm.158564	NR_038005	ENSMUSG00000021874	4933413J09Rik	GCSE	RIKEN cDNA 4933413J09 gene	ncRNA
common_peak1-16408-7-1-1.79909083029819-1.80617997398389	chr5	125404584	125405087	+	0	NA	Intergenic	B4A|SINE|B4	61760	NM_001081750	269704	Mm.138617	NM_001081750	ENSMUSG00000079215	Zfp664	AW060232|D930038J03Rik|ZFOC1|Znf664	zinc finger protein 664	protein-coding
common_peak1-10271-9-11--0.395349094316936-0.344532117358383	chr13	56582027	56582551	+	0	NA	intron (NM_008373, intron 3 of 4)	intron (NM_008373, intron 3 of 4)	1318	NM_008373	16198	Mm.3006	NM_008373	ENSMUSG00000021538	Il9	Il-9|P40	interleukin 9	protein-coding
common_peak1-13416-11-12--0.191746133889479-0.310474156842889	chr19	53318614	53319278	+	0	NA	intron (NM_013758, intron 15 of 15)	intron (NM_013758, intron 15 of 15)	10749	NR_036590	69319	Mm.57452	NR_036590		1700001K23Rik	-	RIKEN cDNA 1700001K23 gene	ncRNA
unique_peak1-1911-10-2-1.77145284428761-2.09384600808989	chr14	70171102	70171701	+	0	NA	intron (NM_020275, intron 2 of 7)	RMER1B|Other|Other	4122	NM_020275	21933	Mm.193430	NM_020275	ENSMUSG00000022074	Tnfrsf10b	DR5|KILLER|Ly98|MK|TRAILR2|TRICK2A|TRICK2B|TRICKB	tumor necrosis factor receptor superfamily, member 10b	protein-coding
common_peak2-27679-22-46--0.907304746590233-1.67017740290565	chr3	116807678	116809058	+	0	NA	Intergenic	Intergenic	-27685	NR_038029	433646	Mm.158997	NR_038029	ENSMUSG00000028009	1700061I17Rik	-	RIKEN cDNA 1700061I17 gene	ncRNA
common_peak2-24891-26-25-0.22745937401737-0.399869693390336	chr17	84044553	84045446	+	0	NA	Intergenic	Intergenic	-13764	NM_153512	225030	Mm.223506	NM_153512	ENSMUSG00000045053	Kcng3	KV6.3|Kv10.1a|Kv10.1b	potassium voltage-gated channel, subfamily G, member 3	protein-coding
common_peak2-25737-15-17--0.157760250886656-0.307611222530528	chr19	24342371	24342993	+	0	NA	intron (NM_008044, intron 3 of 4)	intron (NM_008044, intron 3 of 4)	12394	NM_008044	14297	Mm.7319	NM_008044	ENSMUSG00000059363	Fxn	FA|FARR|Frda|X25	frataxin	protein-coding
common_peak1-19030-22-10-1.18785248645011-1.74319850844462	chr9	64114101	64115039	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-13158	NM_008927	26395	Mm.248907	NM_008927	ENSMUSG00000004936	Map2k1	MAPKK1|MEKK1|Mek1|Prkmk1	mitogen-activated protein kinase kinase 1	protein-coding
unique_peak1-3855-11-2-1.92373108353046-2.32232533660526	chr2	6295081	6295705	+	0	NA	intron (NM_181399, intron 1 of 13)	intron (NM_181399, intron 1 of 13)	21611	NM_181399	98910	Mm.40673	NM_181399	ENSMUSG00000039046	Usp6nl	AI316785|RNTRE|TRE2NL|mKIAA0019	USP6 N-terminal like	protein-coding
common_peak1-11570-14-8-0.729291158915332-0.771068449301682	chr16	13589293	13589860	+	0	NA	intron (NM_028761, intron 21 of 23)	intron (NM_028761, intron 21 of 23)	-69064	NR_037997	70100	Mm.158330	NR_037997		2310015D24Rik	-	RIKEN cDNA 2310015D24 gene	ncRNA
common_peak1-16339-39-35-0.445836245476841-0.810079075897168	chr5	118154734	118155514	+	0	NA	intron (NM_001114545, intron 12 of 19)	intron (NM_001114545, intron 12 of 19)	-162004	NM_008712	18125	Mm.44249	NM_008712	ENSMUSG00000029361	Nos1	2310005C01Rik|NO|NOS-I|Nos-1|bNOS|nNOS	nitric oxide synthase 1, neuronal	protein-coding
common_peak2-23710-27-35--0.178379050547076-0.330208782692001	chr15	89196068	89196619	+	0	NA	intron (NM_001271600, intron 9 of 19)	B3A|SINE|B2	7906	NM_001111288	100126824	Mm.287977	NM_001111288	ENSMUSG00000091780	Sco2	-	SCO cytochrome oxidase deficient homolog 2 (yeast)	protein-coding
unique_peak1-2472-14-7-0.899216160357645-0.947446088118041	chr16	91963244	91963800	+	0	NA	Intergenic	Intergenic	-31647	NM_138597	28080	Mm.41	NM_138597	ENSMUSG00000022956	Atp5o	ATPO|D12Wsu28e|OSCP	ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	protein-coding
common_peak2-28637-10-6-0.549060422951165-1.21398586181642	chr5	29388352	29388745	+	0	NA	Intergenic	L1Md_A|LINE|L1	-133985	NM_021470	56874	Mm.87352	NM_021470	ENSMUSG00000029130	Rnf32	1700009J01Rik|2700025B22Rik|4930542N22Rik|Lmbr2	ring finger protein 32	protein-coding
unique_peak2-36253-4-6--0.830815435910851-0.989110657569874	chr2	51140092	51140423	+	0	NA	intron (NR_040636, intron 1 of 2)	intron (NR_040636, intron 1 of 2)	42906	NR_040636	329404	Mm.417725	NR_040636	ENSMUSG00000086349	Gm13497	A730015I17|OTTMUSG00000012425	predicted gene 13497	ncRNA
unique_peak1-1351-8-0-3.00522241794757-2.70926996097583	chr12	17742879	17743406	+	0	NA	intron (NM_016677, intron 1 of 3)	intron (NM_016677, intron 1 of 3)	45522	NM_016677	53602	Mm.313619	NM_016677	ENSMUSG00000071379	Hpcal1	NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3	hippocalcin-like 1	protein-coding
unique_peak1-3057-9-6-0.382258484346616-1.11707584880836	chr18	8161572	8162078	+	0	NA	Intergenic	Intergenic	292630	NM_153085	225131	Mm.204524	NM_153085	ENSMUSG00000024283	Wac	1110067P07Rik|A230035H12Rik|AI256735|AI256776|Wwp4	WW domain containing adaptor with coiled-coil	protein-coding
unique_peak2-37268-0-6--3.64748585253182-1.56314192529759	chr4	109656519	109656838	+	0	NA	TTS (NM_172296)	TTS (NM_172296)	6048	NM_172296	242620	Mm.32825	NM_172296	ENSMUSG00000047143	Dmrta2	Dmrt5	doublesex and mab-3 related transcription factor like family A2	protein-coding
common_peak2-29441-33-60--0.599399775037358-1.1755042381992	chr6	17281034	17282396	+	0	NA	intron (NM_007616, intron 2 of 2)	intron (NM_007616, intron 2 of 2)	24075	NM_001243064	12389	Mm.28278	NM_007616	ENSMUSG00000007655	Cav1	Cav|Cav-1	caveolin 1, caveolae protein	protein-coding
common_peak1-17144-48-30-1.01673084084794-2.89999763406378	chr6	116643500	116645443	+	0	NA	3' UTR (NM_178768, exon 5 of 5)	3' UTR (NM_178768, exon 5 of 5)	-20617	NM_178045	213391	Mm.257931	NM_178045	ENSMUSG00000042129	Rassf4	3830411C14Rik|AD037|AI586137	Ras association (RalGDS/AF-6) domain family member 4	protein-coding
unique_peak1-2100-7-4-0.477162735410827-1.09384600808989	chr15	37724198	37724634	+	0	NA	Intergenic	Tigger7|DNA|MER2_type	-2233	NM_134094	52589	Mm.283370	NM_134094	ENSMUSG00000051359	Ncald	AI848120|D030020D09Rik|D15Ertd412e	neurocalcin delta	protein-coding
unique_peak2-36060-9-6-0.382258484346616-1.11707584880836	chr19	47868830	47869256	+	0	NA	intron (NM_027559, intron 11 of 37)	intron (NM_027559, intron 11 of 37)	42808	NM_027559	100048534	Mm.29457	NM_027559	ENSMUSG00000044948	Cfap43	4632415N18Rik|4930428C11Rik|4930463G05Rik|AI429486|D19Ertd652e|Wdr96	cilia and flagella associated protein 43	protein-coding
common_peak2-20734-17-17-0.0483713367627256-0.325169893479371	chr10	99243706	99244530	+	0	NA	Intergenic	Intergenic	-21826	NM_027945	71832	Mm.483162	NM_027945	ENSMUSG00000046934	Csl	1700007H16Rik	citrate synthase like	protein-coding
unique_peak2-33842-2-7--1.91745425626332-1.45399745587252	chr12	16526703	16527052	+	0	NA	Intergenic	Intergenic	69699	NM_015763	14245	Mm.153625	NM_015763	ENSMUSG00000020593	Lpin1	4631420P06|Kiaa0188|Lipin1|fld|mKIAA0188	lipin 1	protein-coding
common_peak1-8579-12-7-0.648775985087639-0.697979855752659	chr10	99210694	99211319	+	0	NA	Intergenic	Intergenic	11286	NM_027945	71832	Mm.483162	NM_027945	ENSMUSG00000046934	Csl	1700007H16Rik	citrate synthase like	protein-coding
common_peak2-28016-11-5-0.923731083530457-1.477227296591	chr4	46642647	46643061	+	0	NA	exon (NM_198664, exon 4 of 13)	exon (NM_198664, exon 4 of 13)	20217	NM_198664	381605	Mm.331595	NM_198664	ENSMUSG00000039813	Tbc1d2	A630005A06Rik|BC022630|Gm1037|PARIS-1|PARIS1	TBC1 domain family, member 2	protein-coding
common_peak1-18078-32-15-1.27909201921966-2.70027529094734	chr8	46841842	46843478	+	0	NA	intron (NM_172752, intron 6 of 22)	B2_Mm2|SINE|B2	61991	NR_045739	319940	Mm.441720	NR_045739	ENSMUSG00000085440	Sorbs2os	D330022K07Rik	sorbin and SH3 domain containing 2, opposite strand	ncRNA
unique_peak1-146-7-0-2.79909083029819-2.40823996531185	chr1	71751485	71752030	+	0	NA	Intergenic	Intergenic	51848	NR_040308	100042814	Mm.405775	NR_040308	ENSMUSG00000073652	Apol7d	ENSMUSG00000073652|Gm15456|OTTMUSG00000022136	apolipoprotein L 7d	ncRNA
common_peak2-23852-16-16-0.0308008010177225-0.307611222530525	chr15	102051926	102052768	+	0	NA	intron (NM_013566, intron 8 of 14)	intron (NM_013566, intron 8 of 14)	10019	NM_013566	16421	Mm.58	NM_013566	ENSMUSG00000001281	Itgb7	Ly69	integrin beta 7	protein-coding
unique_peak1-2535-10-2-1.77145284428761-2.09384600808989	chr16	21286669	21287213	+	0	NA	intron (NR_046162, intron 1 of 4)	intron (NR_046162, intron 1 of 4)	10004	NR_046162	328646	Mm.404748	NR_046162	ENSMUSG00000096918	Gm16863	A830060N17	predicted gene, 16863	ncRNA
common_peak2-29161-38-80--0.768397343586094-2.0567716791101	chr5	130171219	130172582	+	0	NA	intron (NM_172462, intron 1 of 2)	intron (NM_172462, intron 1 of 2)	4063	NM_172462	22648	Mm.135067	NM_172462	ENSMUSG00000051034	Zfp11	6720465D24|Krox-6|Zfp-11	zinc finger protein 11	protein-coding
unique_peak1-5842-39-7-2.61576124691915-7.99547444199666	chr6	82041086	82042743	+	0	NA	exon (NM_145570, exon 3 of 3)	exon (NM_145570, exon 3 of 3)	50292	NM_145570	232146	Mm.489683	NM_145570	ENSMUSG00000035104	Eva1a	BC014699|Fam176a|Tmem166	eva-1 homolog A (C. elegans)	protein-coding
unique_peak2-38613-11-28--1.34928741087596-1.9654245668484	chr7	80186207	80187243	+	0	NA	Intergenic	(TA)n|Simple_repeat|Simple_repeat	60229	NR_046024	625243	Mm.261798	NR_046024		Gm6567	-	predicted gene 6567	ncRNA
common_peak2-31656-14-13-0.0918612383000403-0.332077462497413	chr8	126590387	126590946	+	0	NA	Intergenic	Intergenic	43293	NM_001029876	382038	Mm.334891	NM_001029876	ENSMUSG00000031976	Urb2	C77575|mKIAA0133	URB2 ribosome biogenesis 2 homolog (S. cerevisiae)	protein-coding
unique_peak1-6029-12-4-1.32684789020028-2.04196296489515	chr6	113482477	113483044	+	0	NA	intron (NM_001033244, intron 1 of 43)	intron (NM_001033244, intron 1 of 43)	1084	NM_001033244	211651	Mm.160061	NM_001033244	ENSMUSG00000034023	Fancd2	2410150O07Rik|AU015151|BB137857|FA-D2|FA4|FACD|FAD|FANCD	Fanconi anemia, complementation group D2	protein-coding
unique_peak2-37723-1-7--2.62705701021674-1.80617997398389	chr5	105838324	105838800	+	0	NA	Intergenic	ORR1B1|LTR|MaLR	-6232	NM_001033550	433926	Mm.439781	NM_001033550	ENSMUSG00000070639	Lrrc8b	R75581|Ta-lrrp|mKIAA0231	leucine rich repeat containing 8 family, member B	protein-coding
unique_peak2-32633-5-9--1.02630843089322-1.21398586181642	chr1	125701918	125702327	+	0	NA	intron (NM_199021, intron 3 of 25)	intron (NM_199021, intron 3 of 25)	240014	NM_199021	269109	Mm.483255	NM_199021	ENSMUSG00000036815	Dpp10	6430601K09Rik|DPP X|Dprp3	dipeptidylpeptidase 10	protein-coding
unique_peak1-439-12-5-1.06381348436648-1.78669045979184	chr1	165194327	165194900	+	0	NA	intron (NM_001025570, intron 1 of 2)	intron (NM_001025570, intron 1 of 2)	49168	NM_011127	18933	Mm.288642	NM_011127	ENSMUSG00000026586	Prrx1	A230024N07Rik|AA755424|AI385634|AI843499|K-2|Pmx|Pmx1|Prx1|mHox	paired related homeobox 1	protein-coding
common_peak2-30228-36-58--0.403321963194087-0.65827215096213	chr7	4136945	4137455	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-20899	NM_021454	58804	Mm.34268	NM_021454	ENSMUSG00000063838	Cdc42ep5	1700027J19Rik|2010007O02Rik|Borg3|C85526|CEP5	CDC42 effector protein (Rho GTPase binding) 5	protein-coding
unique_peak1-4753-12-4-1.32684789020028-2.04196296489515	chr3	116413371	116413969	+	0	NA	intron (NM_144902, intron 1 of 7)	intron (NM_144902, intron 1 of 7)	1528	NM_144902	229782	Mm.190758	NM_144902	ENSMUSG00000027957	Slc35a3	2310050P13Rik	solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member 3	protein-coding
common_peak1-15572-25-33--0.225612935905233-0.357106932979091	chr4	126677440	126678532	+	0	NA	Intergenic	Intergenic	-20559	NR_045010	71514	Mm.257276	NM_023603	ENSMUSG00000028820	Sfpq	1110004P21Rik|2810416M14Rik|5730453G22Rik|9030402K04Rik|AU021830|D4Ertd314e|Gm12940|OTTMUSG00000009329|PSF|REP1	splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)	protein-coding
common_peak2-26796-23-23-0.136805003787924-0.340939137447793	chr2	148184550	148185668	+	0	NA	Intergenic	IAPLTR2b|LTR|ERVK	-36004	NM_009219	20608	Mm.35324	NM_009219	ENSMUSG00000037014	Sstr4	Smstr4|sst4	somatostatin receptor 4	protein-coding
unique_peak1-2560-8-2-1.42025991722641-1.65811743852845	chr16	24450448	24450987	+	0	NA	intron (NM_001145952, intron 1 of 11)	intron (NM_001145952, intron 1 of 11)	2540	NM_001145952	210126	Mm.209385	NM_178665	ENSMUSG00000033306	Lpp	9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16	LIM domain containing preferred translocation partner in lipoma	protein-coding
common_peak1-14012-30-90--1.33811923070682-5.49283664167422	chr2	109693381	109694652	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-37019	NM_011699	22343	Mm.235300	NM_011699	ENSMUSG00000027162	Lin7c	9130007B12Rik|AI303698|AU019331|AW125731|D2Ertd520e|LIN-7-C|LIN-7C|MALS-3|Veli3	lin-7 homolog C (C. elegans)	protein-coding
common_peak1-7664-9-11--0.395349094316936-0.344532117358383	chr1	74600860	74601331	+	0	NA	exon (NM_001081456, exon 7 of 17)	exon (NM_001081456, exon 7 of 17)	10161	NM_148937	18802	Mm.290731	NM_148937	ENSMUSG00000026173	Plcd4	4921507K24Rik	phospholipase C, delta 4	protein-coding
common_peak1-17836-10-6-0.549060422951165-1.21398586181642	chr7	110163655	110164221	+	0	NA	Intergenic	Intergenic	-26057	NM_147053	259055	Mm.377812	NM_147053	ENSMUSG00000073961	Olfr582	MOR30-3	olfactory receptor 582	protein-coding
common_peak2-27898-16-10-0.658832023630764-0.699649909729472	chr4	149307061	149307726	+	0	NA	intron (NM_029035, intron 1 of 2)	intron (NM_029035, intron 1 of 2)	21722	NM_029035	74646	Mm.30	NM_029035	ENSMUSG00000039911	Spsb1	1110014L01Rik|4930422J18Rik|AI596360|AI854583|SSB-1|SSB1	splA/ryanodine receptor domain and SOCS box containing 1	protein-coding
common_peak1-13815-45-26-1.1054705231814-3.01622027613199	chr2	51972124	51973661	+	0	NA	intron (NM_175238, intron 33 of 35)	intron (NM_175238, intron 33 of 35)	44535	NM_175238	51869	Mm.254530	NM_175238	ENSMUSG00000036202	Rif1	5730435J01Rik|6530403D07Rik|AU016181|AW549474|D2Ertd145e	Rap1 interacting factor 1 homolog (yeast)	protein-coding
common_peak2-22687-25-17-0.691924903902794-0.98872314135509	chr13	98477029	98477732	+	0	NA	Intergenic	Intergenic	147425	NR_046157	328314	Mm.138047	NR_046157		Gm5086	B230311A21|EG328314	predicted gene 5086	ncRNA
unique_peak1-3349-9-4-0.867685311516858-1.36011389749466	chr19	20496355	20497037	+	0	NA	intron (NR_045817, intron 2 of 2)	intron (NR_045817, intron 2 of 2)	16918	NR_045817	68994	Mm.261028	NM_183277	ENSMUSG00000094732	1500015L24Rik	-	RIKEN cDNA 1500015L24 gene	ncRNA
common_peak2-28651-51-38-0.789521606740324-2.06309159043266	chr5	30999813	31000997	+	0	NA	Intergenic	Intergenic	-13863	NM_023047	65254	Mm.27732	NM_023047	ENSMUSG00000029168	Dpysl5	CRAM|CRMP-5|Crmp5	dihydropyrimidinase-like 5	protein-coding
unique_peak2-37007-6-7--0.434601889619698-0.97990265578305	chr3	122349490	122349916	+	0	NA	Intergenic	Intergenic	-27071	NM_153118	214459	Mm.209491	NM_153118	ENSMUSG00000039735	Fnbp1l	2610318I01Rik|AW548221|TOCA1|toca-1	formin binding protein 1-like	protein-coding
unique_peak2-32711-7-6--0.00826409175941478-0.97990265578305	chr1	153487841	153488257	+	0	NA	intron (NM_022018, intron 2 of 13)	MTE2a|LTR|MaLR	69546	NM_022018	63913	Mm.157700	NM_022018		Fam129a	AI256368|AU019833|Niban	family with sequence similarity 129, member A	protein-coding
common_peak2-30026-55-57-0.34663887602513-0.781433730164713	chr6	125349083	125350695	+	0	NA	Intergenic	MTD|LTR|MaLR	-19367	NM_198604	213522	Mm.333396	NM_198604	ENSMUSG00000038167	Plekhg6	BC026778|Gm155	pleckstrin homology domain containing, family G (with RhoGef domain) member 6	protein-coding
unique_peak2-39763-0-9--4.16205902536157-2.31132995230379	chrX	5713193	5713446	+	0	NA	Intergenic	L1Md_F2|LINE|L1	36790	NM_001031664	102954	Mm.426101	NM_001031664	ENSMUSG00000073293	Nudt10	AI853080|Dipp3a	nudix (nucleoside diphosphate linked moiety X)-type motif 10	protein-coding
common_peak1-17795-19-29--0.504203268946832-0.580176690544129	chr7	98815384	98816213	+	0	NA	intron (NM_011807, intron 2 of 22)	intron (NM_011807, intron 2 of 22)	-395106	NM_001243046	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
unique_peak2-34881-11-12--0.191746133889479-0.310474156842889	chr15	79062498	79062965	+	0	NA	intron (NM_001045558, intron 3 of 12)	intron (NM_001045558, intron 3 of 12)	2919	NM_001045558	18693	Mm.259464	NM_008837	ENSMUSG00000068206	Pick1	Prkcabp	protein interacting with C kinase 1	protein-coding
common_peak2-30432-13-19--0.543456064249594-0.466170754204149	chr7	44553637	44553925	+	0	NA	Intergenic	Intergenic	1966123	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak1-2961-14-1-2.89921616035764-3.91338994363176	chr17	71267508	71268143	+	0	NA	Intergenic	Intergenic	-64953	NM_001164074	21815	Mm.101034	NM_009372	ENSMUSG00000047407	Tgif1	AA959811|AI462167|Tgif	TGFB-induced factor homeobox 1	protein-coding
unique_peak2-39153-5-8--0.874305337448166-1.10484139239135	chr8	88199959	88200340	+	0	NA	intron (NM_001081324, intron 1 of 8)	(GA)n|Simple_repeat|Simple_repeat	14759	NM_001081324	74513	Mm.126079	NM_001081324	ENSMUSG00000036902	Neto2	5530601C23Rik|AI854825|BTCL2	neuropilin (NRP) and tolloid (TLL)-like 2	protein-coding
unique_peak1-7106-10-2-1.77145284428761-2.09384600808989	chr9	43251320	43251854	+	0	NA	Intergenic	Intergenic	132741	NM_023655	72169	Mm.273277	NM_023655	ENSMUSG00000032013	Trim29	1110047J21Rik|2810431N19Rik|4732461M22Rik|AI119726	tripartite motif-containing 29	protein-coding
common_peak2-21808-12-36--1.56067738054131-2.74004546941311	chr11	118418349	118419235	+	0	NA	intron (NM_001285436, intron 3 of 13)	intron (NM_001285436, intron 3 of 13)	80518	NM_172573	217364	Mm.473963	NM_172573	ENSMUSG00000033857	Engase	C130099A03|D230014K01Rik	endo-beta-N-acetylglucosaminidase	protein-coding
common_peak1-8047-34-45--0.141493429055747-0.323497957212832	chr1	171503084	171504369	+	0	NA	Intergenic	Lx8|LINE|L1	-42131	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
common_peak1-11580-17-15-0.218296338205038-0.403453972741633	chr16	14316908	14317408	+	0	NA	intron (NM_025345, intron 1 of 4)	intron (NM_025345, intron 1 of 4)	267	NM_025345	66086	Mm.42072	NM_025345	ENSMUSG00000022677	Fopnl	0610037P05Rik	Fgfr1op N-terminal like	protein-coding
unique_peak2-36332-4-4--0.345388608740609-0.864171920961574	chr2	90611962	90612269	+	0	NA	intron (NM_018828, intron 12 of 16)	intron (NM_018828, intron 12 of 16)	-10786	NM_178755	271813	Mm.61146	NM_178755	ENSMUSG00000040812	Agbl2	4930524K04|A430081C19Rik|CCP2	ATP/GTP binding protein-like 2	protein-coding
unique_peak2-33306-7-6--0.00826409175941478-0.97990265578305	chr11	5485582	5485996	+	0	NA	intron (NM_023816, intron 7 of 26)	MTC|LTR|MaLR	16102	NM_023816	76389	Mm.67300	NM_023816	ENSMUSG00000020481	Ankrd36	1700008J08Rik|1700012M14Rik|Ankrd48	ankyrin repeat domain 36	protein-coding
unique_peak1-6214-11-0-3.50869358425161-3.61235994796777	chr7	101154809	101155339	+	0	NA	Intergenic	L1_Mus3|LINE|L1	926685	NM_021427	58238	Mm.113787	NM_021427		Fam181b	A830059I20Rik|AB041569	family with sequence similarity 181, member B	protein-coding
common_peak2-20606-43-114--1.06292686542067-4.86934715770728	chr10	79987844	79989374	+	0	NA	intron (NM_026094, intron 21 of 27)	intron (NM_026094, intron 21 of 27)	13260	NM_026094	67331	Mm.52511	NM_026094	ENSMUSG00000003341	Atp8b3	1700042F02Rik|1700056N23Rik|ATPIK|SAPLT	ATPase, class I, type 8B, member 3	protein-coding
unique_peak2-37325-5-9--1.02630843089322-1.21398586181642	chr4	129263612	129264161	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-8062	NM_182783	230766	Mm.20377	NM_182783	ENSMUSG00000050493	Fam167b	SEC	family with sequence similarity 167, member B	protein-coding
unique_peak1-4756-10-1-2.35641534500877-2.57096726280955	chr3	119709434	119710129	+	0	NA	Intergenic	Lx8|LINE|L1	-223475	NM_019550	56195	Mm.29966	NM_019550	ENSMUSG00000028134	Ptbp2	Ptb2|brPTB|nPTB	polypyrimidine tract binding protein 2	protein-coding
common_peak1-13918-16-23--0.466698858453094-0.497202060940027	chr2	84549942	84550736	+	0	NA	intron (NM_144887, intron 2 of 11)	intron (NM_144887, intron 2 of 11)	4982	NM_144887	228136	Mm.288508	NM_144887	ENSMUSG00000034075	Zdhhc5	1110032A17Rik|AI451382|Zisp	zinc finger, DHHC domain containing 5	protein-coding
unique_peak1-1969-6-3-0.565398110380302-1.08602067057793	chr14	118657612	118658137	+	0	NA	promoter-TSS (NR_105749)	promoter-TSS (NR_105749)	18	NR_105749	102465149		NR_105749	miRBase:MI0021588	Mir6241	mmu-mir-6241	microRNA mir-6241	ncRNA
common_peak2-25507-41-22-1.17758674879165-3.01957526180442	chr19	5474353	5475062	+	0	NA	promoter-TSS (NM_021474)	promoter-TSS (NM_021474)	17	NM_021474	58859	Mm.276367	NM_021474	ENSMUSG00000024909	Efemp2	0610011K11Rik|Fbln4|MBP1	epidermal growth factor-containing fibulin-like extracellular matrix protein 2	protein-coding
unique_peak2-35079-8-17--1.16470258349474-1.02063122982878	chr16	16358430	16359054	+	0	NA	promoter-TSS (NM_001276341)	promoter-TSS (NM_001276341)	-74	NR_075074	74006	Mm.218820	NM_152816	ENSMUSG00000022789	Dnm1l	6330417M19Rik|AI450666|Dlp1|Dnmlp1|Drp1|python	dynamin 1-like	protein-coding
unique_peak2-38370-6-5--0.0195643903408542-0.947717972411649	chr7	6283442	6283841	+	0	NA	Intergenic	Lx5|LINE|L1	-1605	NM_001033249	213011	Mm.333558	NM_001033249	ENSMUSG00000030443	Zfp583	BC056221|Znf583	zinc finger protein 583	protein-coding
common_peak2-23570-5-5--0.289342836727009-0.909929411522249	chr15	79403387	79403619	+	0	NA	intron (NR_103477, intron 7 of 8)	intron (NR_103477, intron 7 of 8)	-26332	NM_199080	67040	Mm.29644	NM_152806	ENSMUSG00000055065	Ddx17	2610007K22Rik|A430025E01Rik|AI047725|C80929|Gm926|p72	DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	protein-coding
common_peak2-32307-12-16--0.4386868561627-0.368541233333383	chrX	48284861	48285538	+	0	NA	intron (NM_001190332, intron 1 of 11)	intron (NM_001190332, intron 1 of 11)	10688	NM_001190332	385354	Mm.393050	NM_001190332		Frmd7	EG665849|Gm1533	FERM domain containing 7	protein-coding
common_peak2-28268-11-10-0.0492619656143161-0.31137425193576	chr4	127243713	127244208	+	0	NA	Intergenic	Intergenic	-208552	NM_010291	14622	Mm.26859	NM_010291	ENSMUSG00000042357	Gjb5	Cnx31.1|Cx31.1|Gjb-5	gap junction protein, beta 5	protein-coding
common_peak2-22292-15-18--0.235762762887929-0.326591483156968	chr13	14522305	14522967	+	0	NA	intron (NM_001081348, intron 2 of 28)	intron (NM_001081348, intron 2 of 28)	92857	NM_001081348	94253	Mm.125298	NM_153130	ENSMUSG00000021301	Hecw1	9330116H24Rik|AV273951|E130207I19Rik|Nedl1	HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	protein-coding
common_peak1-18561-34-10-1.92263690836397-4.89888609789328	chr8	104867111	104868330	+	0	NA	Intergenic	Intergenic	441291	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
unique_peak1-3042-12-1-2.64877598508764-3.36932189928148	chr18	5323157	5323835	+	0	NA	intron (NM_178722, intron 1 of 4)	intron (NM_178722, intron 1 of 4)	10941	NM_178722	240186	Mm.118257	NM_178722	ENSMUSG00000050945	Zfp438	9430031G09|9430091M14Rik|B830013J05Rik	zinc finger protein 438	protein-coding
unique_peak2-33552-6-8--0.60452689106201-1.03789460276074	chr11	80142672	80143181	+	0	NA	intron (NM_139228, intron 4 of 8)	L1MB3|LINE|L1	28512	NM_139228	246104	Mm.194148	NM_139228	ENSMUSG00000017692	Rhbdl3	AI847581|Rhbdl4|Rhomr1|Vrho	rhomboid, veinlet-like 3 (Drosophila)	protein-coding
common_peak1-7742-61-81-0.0251973251312565-0.306326401119212	chr1	90224705	90226201	+	0	NA	intron (NM_134252, intron 7 of 26)	URR1A|DNA|MER1_type	22166	NM_134252	171382	Mm.218753	NM_134252	ENSMUSG00000036251	Trpm8	CMR1|LTRPC6|LTrpC-6|TRPP8|Trp-p8	transient receptor potential cation channel, subfamily M, member 8	protein-coding
unique_peak1-2185-6-0-2.5653981103803-2.10720996964787	chr15	63408239	63408727	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-97320	NR_045279	432958	Mm.255105	NR_045279		Gm20740	-	predicted gene, 20740	ncRNA
common_peak2-27534-48-60-0.0401898136719279-0.316920393882012	chr3	95995317	95996601	+	0	NA	intron (NM_022030, intron 10 of 12)	GA-rich|Low_complexity|Low_complexity	5550	NM_026975	69168	Mm.104531	NM_026975	ENSMUSG00000015943	Bola1	1810037G04Rik	bolA-like 1 (E. coli)	protein-coding
common_peak2-22965-15-21--0.447266868081641-0.448200956659578	chr14	54426577	54427388	+	0	NA	Intergenic	Intergenic	141367	NM_001205242	100568452	Mm.213248	NM_001205242		A430107P09Rik	Va10	RIKEN cDNA A430107P09 gene	protein-coding
unique_peak2-37242-8-8--0.164702583494742-1.00793137938329	chr4	94094906	94095270	+	0	NA	Intergenic	Intergenic	128399	NM_026368	67770	Mm.35170	NM_026368	ENSMUSG00000028578	Caap1	5830433M19Rik|AI536248|CAAP	caspase activity and apoptosis inhibitor 1	protein-coding
unique_peak1-4037-10-3-1.35641534500877-1.75805390616669	chr2	58485851	58486323	+	0	NA	intron (NM_001289660, intron 1 of 7)	intron (NM_001289660, intron 1 of 7)	66342	NM_001289660	76654	Mm.200370	NM_029692	ENSMUSG00000026839	Upp2	1700124F02Rik|AI266885|UDRPASE2|UP2|UPASE2	uridine phosphorylase 2	protein-coding
unique_peak2-34039-5-7--0.704380336005853-1.01466476204226	chr12	112693690	112694059	+	0	NA	TTS (NM_009396)	TTS (NM_009396)	13002	NM_009396	21928	Mm.255332	NM_009396	ENSMUSG00000021281	Tnfaip2	B94|Exoc3l3|M-sec|Tnfip2|tnfb94	tumor necrosis factor, alpha-induced protein 2	protein-coding
common_peak2-20648-26-29-0.0210084965499435-0.304710633611964	chr10	81320877	81321652	+	0	NA	Intergenic	RLTR8|LTR|ERVK	-5415	NM_001243067	73610	Mm.490466	NM_001243067		Zfp433	1700123A16Rik	RIKEN cDNA 1700123A16 gene	protein-coding
unique_peak2-36619-6-9--0.75652998450706-1.11707584880836	chr3	55099065	55099620	+	0	NA	intron (NM_001111053, intron 3 of 6)	intron (NM_001111053, intron 3 of 6)	52894	NM_001195538	13175	Mm.393242	NM_019978	ENSMUSG00000027797	Dclk1	1700113D08Rik|2810480F11Rik|AI836758|Click-I|Cpg16|Dcamkl1|Dcl|Dclk|mKIAA0369	doublecortin-like kinase 1	protein-coding
common_peak2-19736-32-49--0.364764170555064-0.548322060310103	chr1	74236459	74237630	+	0	NA	Intergenic	Intergenic	4161	NM_178241	227288	Mm.337035	NM_178241	ENSMUSG00000048480	Cxcr1	Il8ra	chemokine (C-X-C motif) receptor 1	protein-coding
unique_peak1-1437-9-4-0.867685311516858-1.36011389749466	chr12	98900930	98901420	+	0	NA	Intergenic	Intergenic	596372	NM_008079	14420	Mm.5120	NM_008079	ENSMUSG00000021003	Galc	2310068B06Rik|A930008M05Rik|AW212969|AW413532|Gacy|twi|twitcher	galactosylceramidase	protein-coding
common_peak2-23936-34-34-0.2527855100563-0.484230028934922	chr16	13109488	13110540	+	0	NA	5' UTR (NM_015769, exon 1 of 11)	5' UTR (NM_015769, exon 1 of 11)	185	NM_015769	50505	Mm.287837	NM_015769		Ercc4	AI606920|Xpf	excision repair cross-complementing rodent repair deficiency, complementation group 4	protein-coding
common_peak2-22690-19-71--1.76723767478063-6.53325742942581	chr13	98534300	98536041	+	0	NA	Intergenic	Intergenic	205215	NR_046157	328314	Mm.138047	NR_046157		Gm5086	B230311A21|EG328314	predicted gene 5086	ncRNA
common_peak1-12772-13-7-0.778472030637769-0.817533494790411	chr18	60963118	60963728	+	0	NA	promoter-TSS (NM_001042605)	promoter-TSS (NM_001042605)	-80	NM_001042605	16149	Mm.439737	NM_010545	ENSMUSG00000024610	Cd74	CLIP|DHLAG|HLADG|Ia-GAMMA|Ii	CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)	protein-coding
common_peak1-10685-61-75-0.134821816305755-0.389025993365906	chr14	54617326	54618750	+	0	NA	Intergenic	Lx7|LINE|L1	255566	NM_001113358	13135	Mm.319038	NM_010015	ENSMUSG00000022174	Dad1	AI323713	defender against cell death 1	protein-coding
common_peak1-9787-41-52--0.0267717497145386-0.301029995663982	chr12	59060990	59062001	+	0	NA	Intergenic	Intergenic	-251296	NM_009216	20605	Mm.278336	NM_009216		Sstr1	SRIF-2|SS-1-R|SS1-R|SS1R|Smstr-1|Smstr1|sst1	somatostatin receptor 1	protein-coding
unique_peak2-35936-7-9--0.522837264589173-1.05908390183068	chr19	8880193	8880755	+	0	NA	Intergenic	Intergenic	3454	NM_001098237	75291	Mm.23423	NM_133759	ENSMUSG00000071661	Zbtb3	4930563M09Rik	zinc finger and BTB domain containing 3	protein-coding
unique_peak2-32832-2-5--1.50241675698448-1.08602067057793	chr1	191185437	191185782	+	0	NA	intron (NM_001281848, intron 1 of 5)	intron (NM_001281848, intron 1 of 5)	-17538	NM_001281847	16526	Mm.33304	NM_010607	ENSMUSG00000037624	Kcnk2	A430027H14Rik|AI848635|TREK-1	potassium channel, subfamily K, member 2	protein-coding
unique_peak2-35726-10-10--0.103016273628528-0.301029995663987	chr18	35066163	35066639	+	0	NA	intron (NM_144866, intron 9 of 10)	B1_Mus1|SINE|Alu	25256	NM_144866	225363	Mm.329353	NM_144866	ENSMUSG00000024360	Etf1	AI463371|D6Ertd109e|ERF|ERF1|SUP45L1|TB3-1	eukaryotic translation termination factor 1	protein-coding
common_peak1-7720-17-6-1.41094141614743-1.84350559086818	chr1	88140658	88141359	+	0	NA	intron (NM_030184, intron 19 of 24)	intron (NM_030184, intron 19 of 24)	-58788	NM_145222	227327	Mm.86467	NM_145222	ENSMUSG00000079445	B3gnt7	C330001H22Rik|beta-3GnT7	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7	protein-coding
common_peak1-14709-52-107--0.646627511897769-2.09673117042237	chr3	75556130	75557108	+	0	NA	Intergenic	ORR1D2|LTR|MaLR	-96966	NR_040539	69193	Mm.374088	NR_040539		2410007B07Rik	-	RIKEN cDNA 2410007B07 gene	ncRNA
common_peak1-10418-33-27-0.523982640467925-0.852249209606516	chr13	98694602	98695594	+	0	NA	intron (NM_012026, intron 35 of 35)	RSINE1|SINE|B4	281022	NM_012026	110596	Mm.252718	NM_012026	ENSMUSG00000021662	Arhgef28	9230110L08Rik|AI323540|D13Bwg1089e|RIP2|Rgnef|RhoGEF|Rhoip2|p190RhoGEF	Rho guanine nucleotide exchange factor (GEF) 28	protein-coding
unique_peak1-1326-7-1-1.79909083029819-1.80617997398389	chr12	8217911	8218330	+	0	NA	intron (NM_001167767, intron 1 of 5)	L1_Mur3|LINE|L1	3187	NM_001167767	68832	Mm.25608	NM_172401	ENSMUSG00000037669	1110057K04Rik	LDAH	RIKEN cDNA 1110057K04 gene	protein-coding
common_peak1-16610-11-10-0.0492619656143161-0.31137425193576	chr5	151155391	151155981	+	0	NA	intron (NM_172887, intron 7 of 60)	intron (NM_172887, intron 7 of 60)	93181	NM_172887	320365	Mm.216590	NM_172887	ENSMUSG00000056602	Fry	13CDNA73|9330186A19Rik|AF346502|AI462658|C87180|D930046M03|cg003|mKIAA4143	furry homolog (Drosophila)	protein-coding
common_peak2-31100-10-5-0.771452844287613-1.33892459842472	chr8	26978480	26978895	+	0	NA	intron (NM_008432, intron 7 of 26)	G-rich|Low_complexity|Low_complexity	18592	NM_008432	16532	Mm.289679	NM_008432	ENSMUSG00000031576	Kcnu1	Kcnma3|Slo3|mSlo3	potassium channel, subfamily U, member 1	protein-coding
unique_peak2-38493-4-7--1.02346051385325-1.09384600808989	chr7	35332935	35333379	+	0	NA	Intergenic	L1M5|LINE|L1	104703	NM_146188	233107	Mm.486198	NM_146188	ENSMUSG00000030499	Kctd15	BC031749	potassium channel tetramerisation domain containing 15	protein-coding
unique_peak2-34442-1-29--4.53394760582526-7.42783416306327	chr14	21982474	21983937	+	0	NA	intron (NM_134079, intron 3 of 10)	intron (NM_134079, intron 3 of 10)	87831	NM_001243041	11534	Mm.188734	NM_134079	ENSMUSG00000039197	Adk	2310026J05Rik|5033405D03Rik|AI255373|AI987814|Ak	adenosine kinase	protein-coding
unique_peak2-35147-5-6--0.511735258063458-0.947717972411649	chr16	32446208	32446636	+	0	NA	intron (NM_001163160, intron 1 of 8)	RMER4B|LTR|ERVK	15106	NM_001163160	13026	Mm.98775	NM_009981	ENSMUSG00000005615	Pcyt1a	CTalpha|Cctalpha|Ctpct|Cttalpha	phosphate cytidylyltransferase 1, choline, alpha isoform	protein-coding
unique_peak2-35557-3-7--1.41398308995928-1.23214870625617	chr17	65743931	65744347	+	0	NA	intron (NM_001289485, intron 13 of 15)	intron (NM_001289485, intron 13 of 15)	145983	NM_001008973	381107	Mm.141275	NM_001008973	ENSMUSG00000045036	Tmem232	E130009J12Rik|Gm940|Tes13-L|Tes13-S	transmembrane protein 232	protein-coding
common_peak2-26063-62-106--0.330715527599062-0.803416426948883	chr2	57114522	57117640	+	0	NA	intron (NM_010274, intron 1 of 16)	intron (NM_010274, intron 1 of 16)	25288	NM_010274	14571	Mm.3711	NM_010274	ENSMUSG00000026827	Gpd2	AA408484|AI448216|AU021455|AW494132|GPDH|Gdm1|Gpd-m|Gpdh-m|TISP38	glycerol phosphate dehydrogenase 2, mitochondrial	protein-coding
common_peak2-30170-36-34-0.350038069222788-0.634705740500755	chr6	149141526	149142557	+	0	NA	Intergenic	Intergenic	-4807	NM_001113424	232566	Mm.209147	NM_001113424	ENSMUSG00000068250	Amn1	5830467E07Rik|A230083D09|C730024G19Rik	antagonist of mitotic exit network 1	protein-coding
common_peak1-17886-9-7-0.18961340640422-1.05908390183068	chr7	118495329	118495840	+	0	NA	Intergenic	ORR1B1-int|LTR|MaLR	-229395	NR_015573	75479	Mm.381620	NR_015573		1700012D14Rik	-	RIKEN cDNA 1700012D14 gene	ncRNA
common_peak1-11684-14-20--0.493101262421116-0.456667090758524	chr16	30187594	30188307	+	0	NA	Intergenic	Intergenic	79668	NM_027904	71756	Mm.290614	NM_027904	ENSMUSG00000023176	Cpn2	1300018K11Rik	carboxypeptidase N, polypeptide 2	protein-coding
common_peak2-30116-23-28--0.136213490618491-0.317118655902079	chr6	136808244	136809021	+	0	NA	Intergenic	L1MD2|LINE|L1	-2511	NM_026639	109978	Mm.31840	NM_026639	ENSMUSG00000030217	Art4	4432404K01Rik|ARTC4|DO|DOK1	ADP-ribosyltransferase 4	protein-coding
common_peak2-26464-19-29--0.504203268946832-0.580176690544129	chr2	75832016	75832923	+	0	NA	intron (NM_001081033, intron 19 of 19)	intron (NM_001081033, intron 19 of 19)	-12445	NM_030188	78802	Mm.282339	NM_030188	ENSMUSG00000075271	Ttc30a1	4930506L13Rik	tetratricopeptide repeat domain 30A1	protein-coding
common_peak1-18943-9-10--0.269818212233077-1.05503135781948	chr9	48406566	48407092	+	0	NA	intron (NM_010924, intron 2 of 2)	PB1D10|SINE|Alu	6353	NM_010924	18113	Mm.8362	NM_010924	ENSMUSG00000032271	Nnmt	-	nicotinamide N-methyltransferase	protein-coding
common_peak2-29352-19-25--0.297752391479405-0.376654945067947	chr5	149606224	149607113	+	0	NA	Intergenic	MTD|LTR|MaLR	53252	NR_028285	70138	Mm.417834	NR_028285	ENSMUSG00000086494	2210417A02Rik	AV081004	RIKEN cDNA 2210417A02 gene	ncRNA
common_peak2-25283-34-68--0.726455929776903-1.64821041203306	chr18	69345915	69346949	+	0	NA	Intergenic	Intergenic	-157714	NM_013685	21413	Mm.4269	NM_013685	ENSMUSG00000053477	Tcf4	5730422P05Rik|ASP-I2|E2-2|E2.2|ITF-2|ITF-2b|ITF2|ME2|MITF-2A|MITF-2B|SEF-2|SEF2|SEF2-1|TFE|Tcf-4|bHLHb19	transcription factor 4	protein-coding
unique_peak1-1327-6-1-1.5653981103803-1.56314192529759	chr12	8244495	8244994	+	0	NA	intron (NM_001167768, intron 3 of 5)	MER5A|DNA|MER1_type	29811	NM_001167767	68832	Mm.25608	NM_172401	ENSMUSG00000037669	1110057K04Rik	LDAH	RIKEN cDNA 1110057K04 gene	protein-coding
unique_peak2-34380-5-6--0.511735258063458-0.947717972411649	chr13	114935159	114935613	+	0	NA	intron (NR_045836, intron 7 of 13)	intron (NR_045836, intron 7 of 13)	6414	NR_045836	319803	Mm.386896	NM_177004		A430090L17Rik	-	RIKEN cDNA A430090L17 gene	ncRNA
common_peak2-26549-11-16--0.578769256998726-0.503257505534083	chr2	93849116	93849880	+	0	NA	intron (NM_026944, intron 1 of 9)	B1_Mus1|SINE|Alu	1389	NM_026944	69113	Mm.272498	NM_026944	ENSMUSG00000040174	Alkbh3	1700108H04Rik|1810020C19Rik|Abh3|mABH3	alkB, alkylation repair homolog 3 (E. coli)	protein-coding
common_peak1-18621-82-88-0.417529713339337-1.31294114345216	chr8	109564759	109566713	+	0	NA	intron (NM_126165, intron 6 of 10)	intron (NM_126165, intron 6 of 10)	6778	NM_026513	68023	Mm.482335	NM_026513	ENSMUSG00000078931	Pdf	2610019N19Rik	peptide deformylase (mitochondrial)	protein-coding
common_peak1-16988-8-16--1.08224042330277-0.891319708951328	chr6	87811114	87811595	+	0	NA	Intergenic	Intergenic	-10254	NM_001109745	12785	Mm.290251	NM_013493	ENSMUSG00000030057	Cnbp	AA408710|Cnbp1|Znf9	cellular nucleic acid binding protein	protein-coding
unique_peak2-37758-5-8--0.874305337448166-1.10484139239135	chr5	114371052	114371511	+	0	NA	Intergenic	Intergenic	-12566	NM_011779	23790	Mm.260158	NM_011779	ENSMUSG00000004530	Coro1c	AL022675|AW455561|AW548837	coronin, actin binding protein 1C	protein-coding
unique_peak1-3893-10-6-0.549060422951165-1.21398586181642	chr2	20547633	20548181	+	0	NA	intron (NM_001081006, intron 3 of 21)	intron (NM_001081006, intron 3 of 21)	106767	NM_001177631	208618	Mm.237935	NM_029895	ENSMUSG00000036617	Etl4	6620402G01Rik|9430077C05Rik|BC026657|E330027G05Rik|Etl-4|Skt	enhancer trap locus 4	protein-coding
common_peak1-13775-49-74--0.222534867470697-0.458521068983781	chr2	36135877	36137046	+	0	NA	Intergenic	Intergenic	50515	NM_008969	19224	Mm.275434	NM_008969	ENSMUSG00000047250	Ptgs1	COX1|Cox-1|Cox-3|PGHS-1|PHS 1|Pghs1	prostaglandin-endoperoxide synthase 1	protein-coding
common_peak1-10020-41-29-0.794258109240142-1.7388889233551	chr13	8885169	8886293	+	0	NA	intron (NM_145360, intron 1 of 4)	intron (NM_145360, intron 1 of 4)	879	NM_145360	319554	Mm.29847	NM_145360	ENSMUSG00000058258	Idi1	4832416K17Rik	isopentenyl-diphosphate delta isomerase	protein-coding
common_peak1-19015-10-4-1.03448725012141-1.5150158574804	chr9	62829908	62830391	+	0	NA	Intergenic	CT-rich|Low_complexity|Low_complexity	-1463	NM_019663	56469	Mm.431253	NM_019663	ENSMUSG00000032405	Pias1	2900068C24Rik|Ddxbp1|GBP	protein inhibitor of activated STAT 1	protein-coding
common_peak1-17902-18-25--0.38752056691274-0.421916810733234	chr7	122067201	122068094	+	0	NA	Intergenic	RMER17C|LTR|ERVK	-24517	NR_040317	101786	Mm.395157	NR_040317		A730082K24Rik	AU044236	RIKEN cDNA A730082K24 gene	ncRNA
unique_peak2-32454-4-6--0.830815435910851-0.989110657569874	chr1	10593120	10593480	+	0	NA	intron (NM_001289497, intron 1 of 9)	intron (NM_001289497, intron 1 of 9)	116726	NM_001289497	329093	Mm.336423	NM_177834	ENSMUSG00000042501	Cpa6	9030616D13Rik	carboxypeptidase A6	protein-coding
common_peak2-20142-14-10-0.439784541720347-0.519648556297791	chr1	167271161	167271680	+	0	NA	intron (NM_028759, intron 14 of 18)	intron (NM_028759, intron 14 of 18)	45523	NM_001081126	240888	Mm.329929	NM_001081126		Gpr161	Gm208|Gm208Gpr|vl	G protein-coupled receptor 161	protein-coding
common_peak1-18257-31-41--0.167078751965637-0.345592563585011	chr8	33928707	33929903	+	0	NA	Intergenic	Intergenic	131193	NM_001177589	100042715	Mm.291093	NM_001177589		Gm3985	-	predicted gene 3985	protein-coding
common_peak1-10499-32-23-0.694129518498504-1.20786488037717	chr14	30654076	30655125	+	0	NA	Intergenic	Intergenic	-119550	NM_009785	12294	Mm.386754	NM_009785	ENSMUSG00000021991	Cacna2d3	Cacnad3	calcium channel, voltage-dependent, alpha2/delta subunit 3	protein-coding
unique_peak2-37730-4-16--2.11092335510359-1.97518968347063	chr5	108903200	108903707	+	0	NA	intron (NM_172716, intron 4 of 10)	B3|SINE|B2	13102	NM_172716	69587	Mm.261218	NM_172716		Pcgf3	2310035N15Rik|AI662857|D630042K08Rik|DONG1|E430039C14|RNF3A|Rnf3	polycomb group ring finger 3	protein-coding
common_peak2-26850-56-84--0.173795110698459-0.411711322860738	chr2	154612787	154614110	+	0	NA	Intergenic	Intergenic	-3398	NM_001139512	19383	Mm.221440	NM_023130	ENSMUSG00000027593	Raly	AI663842|Merc	hnRNP-associated with lethal yellow	protein-coding
common_peak2-21251-8-10--0.454209200689727-1.078512453669	chr11	69094311	69094800	+	0	NA	Intergenic	RMER1B|Other|Other	42820	NM_172560	216846	Mm.28774	NM_172560	ENSMUSG00000032782	Cntrob	9830165K03Rik|Lip8	centrobin, centrosomal BRCA2 interacting protein	protein-coding
common_peak2-23825-23-20-0.32945008173032-0.471456499375596	chr15	101322499	101323355	+	0	NA	promoter-TSS (NM_001201323)	promoter-TSS (NM_001201323)	-984	NM_001201323	100126226	Mm.347934	NM_001201323	ENSMUSG00000067613	5430421N21Rik	-	RIKEN cDNA 5430421N21 gene	protein-coding
common_peak1-12941-121-71-1.39744078043569-12.5292133887636	chr19	23133955	23136752	+	0	NA	Intergenic	Intergenic	-80363	NM_010638	16601	Mm.291595	NM_010638	ENSMUSG00000033863	Klf9	2310051E17Rik|AA589643|BTEB-1|Bteb1|ENSMUSG00000055440|Gm9971	Kruppel-like factor 9	protein-coding
common_peak2-21940-10-12--0.344024373132323-0.340565874754526	chr12	28751856	28752355	+	0	NA	Intergenic	L1_Mur1|LINE|L1	481097	NM_001177964	68511	Mm.310284	NM_001177964		Dcdc2c	1110015M06Rik	doublecortin domain containing 2C	protein-coding
unique_peak1-4915-10-5-0.771452844287613-1.33892459842472	chr4	55005273	55005871	+	0	NA	intron (NM_172867, intron 1 of 12)	intron (NM_172867, intron 1 of 12)	44755	NM_172867	242466	Mm.102904	NM_172867	ENSMUSG00000060206	Zfp462	6030417H05|9430078C22Rik|Gt4-2|Zfpip	zinc finger protein 462	protein-coding
common_peak2-28543-10-13--0.450939577048835-0.386243247519795	chr5	3501413	3502004	+	0	NA	intron (NM_009873, intron 4 of 6)	intron (NM_009873, intron 4 of 6)	-42125	NM_001042501	68152	Mm.240265	NM_026583		Fam133b	2900022K02Rik|5830415L20Rik	family with sequence similarity 133, member B	protein-coding
common_peak1-12459-8-10--0.454209200689727-1.078512453669	chr17	84026080	84026623	+	0	NA	intron (NM_153512, intron 1 of 1)	intron (NM_153512, intron 1 of 1)	4884	NM_153512	225030	Mm.223506	NM_153512	ENSMUSG00000045053	Kcng3	KV6.3|Kv10.1a|Kv10.1b	potassium voltage-gated channel, subfamily G, member 3	protein-coding
common_peak2-22743-14-14--0.00767443525087419-0.308519316180257	chr13	111294228	111294944	+	0	NA	Intergenic	L1MC|LINE|L1	109334	NM_152804	20620	Mm.380	NM_152804	ENSMUSG00000021701	Plk2	Snk	polo-like kinase 2	protein-coding
common_peak1-18503-74-167--0.676430845800153-3.39697400295475	chr8	86745106	86746376	+	0	NA	intron (NM_172503, intron 10 of 13)	B1_Mus1|SINE|Alu	-12935	NR_037294	100526528		NR_037294		Mir3074-2	mmu-mir-3074-2	microRNA 3074-2	ncRNA
common_peak1-8244-27-64--1.03082186213322-2.66218884881338	chr10	17947069	17948160	+	0	NA	intron (NM_144820, intron 2 of 5)	intron (NM_144820, intron 2 of 5)	7173	NM_144820	215814	Mm.296565	NM_144820	ENSMUSG00000059554	Ccdc28a	1700009P13Rik|AI480677	coiled-coil domain containing 28A	protein-coding
common_peak2-19918-9-13--0.617741515653384-0.459837087125828	chr1	125677779	125678330	+	0	NA	intron (NM_199021, intron 3 of 25)	intron (NM_199021, intron 3 of 25)	264082	NM_199021	269109	Mm.483255	NM_199021	ENSMUSG00000036815	Dpp10	6430601K09Rik|DPP X|Dprp3	dipeptidylpeptidase 10	protein-coding
unique_peak2-33620-11-10-0.0492619656143161-0.31137425193576	chr11	95842033	95842625	+	0	NA	intron (NM_009951, intron 2 of 14)	intron (NM_009951, intron 2 of 14)	-17632	NR_037223	100526468		NR_037223	miRBase:MI0014025	Mir3063	mmu-mir-3063	microRNA 3063	ncRNA
unique_peak2-38757-11-14--0.398197011356905-0.379391706698377	chr7	120842582	120843440	+	0	NA	Intergenic	L2c|LINE|L2	-66501	NM_145584	233744	Mm.334160	NM_145584	ENSMUSG00000038156	Spon1	AI666765|AW455831|BC020531|D330035F22Rik|FSP	spondin 1, (f-spondin) extracellular matrix protein	protein-coding
common_peak1-17021-9-4-0.867685311516858-1.36011389749466	chr6	91157008	91157443	+	0	NA	Intergenic	Intergenic	-5533	NM_001081437	14115	Mm.249146	NM_007992	ENSMUSG00000064080	Fbln2	5730577E14Rik|FIBL-2	fibulin 2	protein-coding
common_peak2-22897-13-6-0.971117108580164-1.01572999746118	chr14	33334553	33334933	+	0	NA	intron (NM_001081221, intron 4 of 20)	intron (NM_001081221, intron 4 of 20)	8036	NM_001081221	319955	Mm.318310	NM_177043	ENSMUSG00000054051	Ercc6	4732403I04|C130058G22Rik|CSB	excision repair cross-complementing rodent repair deficiency, complementation group 6	protein-coding
unique_peak1-5448-7-2-1.21412832957703-1.45399745587252	chr5	118447608	118448134	+	0	NA	intron (NM_145564, intron 9 of 11)	intron (NM_145564, intron 9 of 11)	21092	NM_145564	231670	Mm.21912	NM_145564	ENSMUSG00000032898	Fbxo21	2810425J22Rik|AU016673|mKIAA0875	F-box protein 21	protein-coding
unique_peak1-1554-8-4-0.683294323060208-1.21878474469819	chr13	25808548	25808833	+	0	NA	Intergenic	MTD|LTR|MaLR	249495	NR_045062	100503530	Mm.86763	NR_045062	ENSMUSG00000086531	Gm11351	OTTMUSG00000000620	predicted gene 11351	ncRNA
unique_peak1-548-10-5-0.771452844287613-1.33892459842472	chr1	191793478	191794129	+	0	NA	Intergenic	Intergenic	-47636	NM_026796	226830	Mm.156895	NM_026796	ENSMUSG00000026603	Smyd2	1110020E07Rik|4930402C15|KMT3C|Zmynd14	SET and MYND domain containing 2	protein-coding
unique_peak1-3230-12-5-1.06381348436648-1.78669045979184	chr18	60895405	60896018	+	0	NA	Intergenic	MIRb|SINE|MIR	-22668	NM_008306	15531	Mm.181862	NM_008306	ENSMUSG00000054008	Ndst1	1200015G06Rik|Hsst|NDST-1|b2b2230Clo	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1	protein-coding
common_peak1-15107-8-6-0.197867495889966-1.03789460276074	chr3	133624652	133625215	+	0	NA	Intergenic	RSINE1|SINE|B4	-274526	NM_001004367	319478	Mm.224814	NM_001004367	ENSMUSG00000044365	Cxxc4	9330210J02Rik|C030003J12Rik|Idax	CXXC finger 4	protein-coding
unique_peak2-39001-5-17--1.87430533744817-1.80287260729378	chr8	46739201	46739733	+	0	NA	intron (NM_172752, intron 1 of 22)	B4A|SINE|B4	146325	NM_001205219	234214	Mm.211096	NM_172752	ENSMUSG00000031626	Sorbs2	2010203O03Rik|9430041O17Rik|A530071H08|Argbp2|mKIAA0777	sorbin and SH3 domain containing 2	protein-coding
common_peak1-15584-14-10-0.439784541720347-0.519648556297791	chr4	129231226	129231835	+	0	NA	intron (NM_001162433, intron 9 of 12)	intron (NM_001162433, intron 9 of 12)	3525	NR_106199	102465997		NR_106199		Mir8119	mmu-mir-8119	microRNA mir-8119	ncRNA
common_peak2-25610-56-51-0.535156107298151-1.29979449988492	chr19	8941815	8942922	+	0	NA	Intergenic	A-rich|Low_complexity|Low_complexity	-3681	NM_146093	225896	Mm.27839	NM_146093	ENSMUSG00000071655	Ubxn1	2B28|4930455J02Rik|D19Ertd721e|T25529	UBX domain protein 1	protein-coding
common_peak1-19142-24-34--0.33607311417725-0.427313034957882	chr9	85842262	85843131	+	0	NA	Intergenic	Intergenic	106237	NM_001164792	21983	Mm.20864	NM_011627	ENSMUSG00000035274	Tpbg	5T4|AW495680|WAIF1	trophoblast glycoprotein	protein-coding
common_peak2-29275-87-174--0.45557400605116-1.82843722922636	chr5	142905106	142907677	+	0	NA	intron (NM_199068, intron 1 of 8)	intron (NM_199068, intron 1 of 8)	28940	NM_199068	17425	Mm.24214	NM_010812	ENSMUSG00000056493	Foxk1	A630048H08Rik|AI463295|ENSMUSG00000075577|Gm10868|Mnf	forkhead box K1	protein-coding
common_peak2-21437-377-367-1.02294009721343-29.148838810777	chr11	86581035	86587004	+	0	NA	intron (NM_026191, intron 17 of 17)	intron (NM_026191, intron 17 of 17)	-13025	NM_001003908	67300	Mm.254588	NM_001003908	ENSMUSG00000047126	Cltc	3110065L21Rik|CHC|R74732	clathrin, heavy polypeptide (Hc)	protein-coding
common_peak1-12099-22-22-0.123722149030391-0.342639663781856	chr17	25752348	25753350	+	0	NA	intron (NM_029624, intron 4 of 10)	PB1D10|SINE|Alu	36730	NR_045520	76483	Mm.12787	NM_029624	ENSMUSG00000002279	Lmf1	2400010G15Rik|AW822050|Tmem112|cld	lipase maturation factor 1	protein-coding
unique_peak2-37880-4-10--1.48289213249054-1.5150158574804	chr5	139251594	139252085	+	0	NA	intron (NM_030565, intron 3 of 9)	B3|SINE|B2	20804	NM_030565	80752	Mm.320355	NM_030565	ENSMUSG00000025854	Fam20c	C76981|DMP-4|DMP4|GEF-CK|mKIAA4081	family with sequence similarity 20, member C	protein-coding
common_peak1-15374-17-41--1.17402108457372-2.09421125609714	chr4	59548579	59549346	+	0	NA	intron (NM_178164, intron 1 of 13)	MT2A|LTR|ERVL	13274	NM_178164	230257	Mm.331640	NM_144904	ENSMUSG00000028382	Ptbp3	5830471K22Rik|AA407443|AI462022|AW107884|C86549|Rod1	polypyrimidine tract binding protein 3	protein-coding
common_peak2-28358-18-23--0.272043349492805-0.34651636097721	chr4	136433424	136434024	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	8368	NM_009777	12260	Mm.2570	NM_009777	ENSMUSG00000036905	C1qb	-	complement component 1, q subcomponent, beta polypeptide	protein-coding
common_peak2-25445-26-16-0.840436250908123-1.24110690293937	chr19	4113336	4114041	+	0	NA	TTS (NM_016666)	TTS (NM_016666)	7887	NM_001276284	11632	Mm.10433	NM_016666	ENSMUSG00000024847	Aip	AA408703|AW476050|Ara9|D19Bwg1412e|Fkbp16|Xap2	aryl-hydrocarbon receptor-interacting protein	protein-coding
common_peak1-17790-12-8-0.478850983645327-0.562038191119709	chr7	98415358	98415965	+	0	NA	intron (NM_011807, intron 1 of 22)	(TA)n|Simple_repeat|Simple_repeat	176365	NM_011807	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
unique_peak2-32763-3-5--0.998945590680433-0.96108193396963	chr1	171281379	171281793	+	0	NA	Intergenic	Intergenic	180009	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
common_peak1-8003-11-17--0.661231417190699-0.58239619684445	chr1	165633853	165634402	+	0	NA	intron (NM_001143956, intron 3 of 3)	intron (NM_001143956, intron 3 of 3)	21236	NM_001143956	240879	Mm.484621	NM_001143956		Mettl11b	Gm207|NTM1B	methyltransferase like 11B	protein-coding
unique_peak1-910-25-10-1.40241828670781-2.39922209159552	chr11	43426114	43427297	+	0	NA	Intergenic	Intergenic	-11641	NM_008375	16204	Mm.142716	NM_008375	ENSMUSG00000020405	Fabp6	GT|I-15P|I-BABP|ILBP|ILBP3|Illbp	fatty acid binding protein 6, ileal (gastrotropin)	protein-coding
unique_peak1-2623-21-7-1.56948926526624-2.44150343356329	chr16	38293763	38294899	+	0	NA	intron (NM_001098404, intron 1 of 8)	intron (NM_001098404, intron 1 of 8)	579	NM_010936	18171	Mm.8509	NM_010936	ENSMUSG00000022809	Nr1i2	PXR|PXR.1|PXR.2|PXR1|SXR|mPXR	nuclear receptor subfamily 1, group I, member 2	protein-coding
unique_peak1-3955-13-7-0.778472030637769-0.817533494790411	chr2	30495882	30496538	+	0	NA	Intergenic	MTD|LTR|MaLR	45646	NM_030137	78617	Mm.40413	NM_030137	ENSMUSG00000047363	Cstad	9530039B02Rik	CSA-conditional, T cell activation-dependent protein	protein-coding
common_peak2-21023-18-8-1.14299414978604-1.45476480588849	chr11	31803284	31803690	+	0	NA	intron (NM_001290678, intron 2 of 7)	intron (NM_001290678, intron 2 of 7)	32547	NM_026252	67579	Mm.339792	NM_026252	ENSMUSG00000020300	Cpeb4	Cpe-bp4|Cpeb-4|mCPEB-4	cytoplasmic polyadenylation element binding protein 4	protein-coding
unique_peak1-1604-11-2-1.92373108353046-2.32232533660526	chr13	37844736	37845307	+	0	NA	Intergenic	Intergenic	-72886	NM_026830	68750	Mm.491109	NM_026830	ENSMUSG00000039087	Rreb1	1110037N09Rik|AA414966|B930013M22Rik	ras responsive element binding protein 1	protein-coding
unique_peak1-4942-6-0-2.5653981103803-2.10720996964787	chr4	87928133	87928650	+	0	NA	intron (NM_001081184, intron 18 of 43)	L1Md_T|LINE|L1	156439	NM_025760	66775	Mm.386788	NM_025760	ENSMUSG00000028497	Ptplad2	4933428I03Rik|HACD4	protein tyrosine phosphatase-like A domain containing 2	protein-coding
common_peak2-21039-17-23--0.366666162516118-0.383878263347744	chr11	35834084	35834545	+	0	NA	intron (NM_001290702, intron 26 of 27)	intron (NM_001290702, intron 26 of 27)	-40723	NM_170779	211652	Mm.31267	NM_170779		Wwc1	AA408228|AU017197|BC037006|Kibra|mKIAA0869	WW, C2 and coiled-coil domain containing 1	protein-coding
unique_peak2-36451-6-5--0.0195643903408542-0.947717972411649	chr2	137662358	137662781	+	0	NA	Intergenic	Intergenic	-419751	NM_001025431	228662	Mm.153405	NM_145534	ENSMUSG00000062098	Btbd3	mKIAA0952	BTB (POZ) domain containing 3	protein-coding
unique_peak1-1403-10-0-3.35641534500877-3.31132995230379	chr12	73090763	73091317	+	0	NA	3' UTR (NM_172464, exon 26 of 26)	3' UTR (NM_172464, exon 26 of 26)	80938	NM_181752	238252	Mm.390508	NM_181752	ENSMUSG00000043398	Gpr135	PAFR	G protein-coupled receptor 135	protein-coding
common_peak2-22049-5-5--0.289342836727009-0.909929411522249	chr12	69503112	69503407	+	0	NA	Intergenic	Intergenic	-733001	NR_033146	100316870	Mm.379794	NR_033146		Gm17821	-	DDB1 and CUL4 associated factor 5 pseudogene	pseudo
common_peak1-9264-16-10-0.658832023630764-0.699649909729472	chr11	87086047	87086791	+	0	NA	intron (NM_177167, intron 1 of 6)	intron (NM_177167, intron 1 of 6)	86077	NM_177167	320472	Mm.341988	NM_177167	ENSMUSG00000046442	Ppm1e	AW049266|B930008A12Rik|POPX1|PP2CH|mKIAA1072	protein phosphatase 1E (PP2C domain containing)	protein-coding
common_peak2-23618-118-155-0.238390464260326-0.840393485058706	chr15	82145206	82148319	+	0	NA	Intergenic	IAPLTR2a|LTR|ERVK	17348	NM_029066	74716	Mm.159315	NM_029066	ENSMUSG00000022455	Wbp2nl	4930521I23Rik|PAWP	WBP2 N-terminal like	protein-coding
common_peak1-15947-120-151-0.305034107048164-1.17969553774918	chr5	29734673	29736943	+	0	NA	Intergenic	RLTRETN_Mm|LTR|ERVK	-25399	NM_001033457	433864	Mm.262815	NM_001033457		Nom1	D5Kng1|Gm1040	nucleolar protein with MIF4G domain 1	protein-coding
unique_peak1-224-8-0-3.00522241794757-2.70926996097583	chr1	88550445	88550964	+	0	NA	Intergenic	Intergenic	16444	NM_010933	18159	Mm.12802	NM_010933	ENSMUSG00000026241	Nppc	CNP|lbab	natriuretic peptide type C	protein-coding
unique_peak2-36093-11-7-0.508693584251613-1.21681515183528	chr19	57272510	57272985	+	0	NA	promoter-TSS (NM_001290816)	promoter-TSS (NM_001290816)	-626	NM_001290816	226251	Mm.217161	NM_178688	ENSMUSG00000025085	Ablim1	2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059	actin-binding LIM protein 1	protein-coding
common_peak2-32159-12-20--0.743541437691122-0.625923329873571	chr9	109038433	109039185	+	0	NA	Intergenic	RMER16-int|LTR|ERVK	25727	NM_177069	320082	Mm.188028	NM_177069	ENSMUSG00000047237	Fbxw21	E330009P21Rik	F-box and WD-40 domain protein 21	protein-coding
unique_peak2-39417-1-8--2.79698201165906-2.05605744720049	chr9	41105769	41106234	+	0	NA	Intergenic	Lx7|LINE|L1	-78643	NR_040725	73144	Mm.482850	NR_040725		3110039I08Rik	-	RIKEN cDNA 3110039I08 gene	ncRNA
common_peak2-30015-55-81--0.152932133465382-0.369699896448768	chr6	125008938	125009868	+	0	NA	intron (NM_016845, intron 6 of 9)	intron (NM_016845, intron 6 of 9)	-8535	NM_001163269	381810	Mm.333386	NM_001163268	ENSMUSG00000067714	Lpar5	GPR93|Gm1072|Gpr92|LPA5	lysophosphatidic acid receptor 5	protein-coding
unique_peak2-38442-3-11--1.99894559068043-1.95434855131066	chr7	27683508	27683911	+	0	NA	Intergenic	RodERV21-int|LTR|ERV1	40696	NM_001101467	233005	Mm.291574	NM_001101467	ENSMUSG00000091867	Cyp2a22	EG233005	cytochrome P450, family 2, subfamily a, polypeptide 22	protein-coding
unique_peak2-32917-8-10--0.454209200689727-1.078512453669	chr10	24475919	24476360	+	0	NA	Intergenic	Intergenic	-44231	NM_008813	18605	Mm.27254	NM_008813	ENSMUSG00000037370	Enpp1	4833416E15Rik|AI428932|C76301|CD203c|E-NPP1|Ly-41|M6S1|NPP1|Npps|PC-1|Pca|Pca-1|Pdnp1|ttw|twy	ectonucleotide pyrophosphatase/phosphodiesterase 1	protein-coding
common_peak1-18604-14-16--0.188246680892695-0.308035960714963	chr8	107047972	107048715	+	0	NA	exon (NM_144931, exon 8 of 20)	exon (NM_144931, exon 8 of 20)	10194	NM_144931	234664	Mm.237670	NM_144931	ENSMUSG00000031878	Nae1	59kDa|Appbp1	NEDD8 activating enzyme E1 subunit 1	protein-coding
unique_peak2-34720-7-10--0.660340788339108-1.12966497611638	chr15	36727555	36727974	+	0	NA	Intergenic	RLTR17|LTR|ERVK	-1080	NM_001253806	22631	Mm.3360	NM_011740	ENSMUSG00000022285	Ywhaz	1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	protein-coding
unique_peak2-38803-4-7--1.02346051385325-1.09384600808989	chr7	132713736	132714183	+	0	NA	intron (NM_001008700, intron 6 of 10)	ORR1E|LTR|MaLR	18163	NM_001008700	16190	Mm.233802	NM_010557	ENSMUSG00000030748	Il4ra	CD124|Il4r	interleukin 4 receptor, alpha	protein-coding
unique_peak2-37559-9-10--0.269818212233077-1.05503135781948	chr5	32134078	32134647	+	0	NA	intron (NM_181281, intron 5 of 10)	B1_Mus1|SINE|Alu	133939	NM_181282	107976	Mm.482126	NM_144541	ENSMUSG00000052139	Bre	6030405P19Rik|AI429776|B830038C02Rik	brain and reproductive organ-expressed protein	protein-coding
common_peak1-15926-14-33--1.18824668089269-1.80321929531239	chr5	24685755	24686471	+	0	NA	Intergenic	ID_B1|SINE|B4	-1185	NM_026449	67909	Mm.141471	NM_026449	ENSMUSG00000028938	Galntl5	1700021B12Rik|Galnt15	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5	protein-coding
common_peak1-18919-10-10--0.103016273628528-0.301029995663987	chr9	44378827	44379322	+	0	NA	Intergenic	Intergenic	-33901	NM_001110826	13209	Mm.267061	NM_007841	ENSMUSG00000032097	Ddx6	1110001P04Rik|E230023J21Rik|HLR2|mRCK/P54|p54|rck	DEAD (Asp-Glu-Ala-Asp) box polypeptide 6	protein-coding
unique_peak1-6534-14-2-2.31425365963649-3.28500101358144	chr7	125472298	125473038	+	0	NA	Intergenic	Intergenic	85247	NR_027879	67745	Mm.483404	NM_183267	ENSMUSG00000055159	4930583K01Rik	-	RIKEN cDNA 4930583K01 gene	ncRNA
common_peak1-13492-33-66--0.734751627932243-1.70008721686218	chr2	32422973	32424362	+	0	NA	3' UTR (NM_153560, exon 11 of 11)	3' UTR (NM_153560, exon 11 of 11)	-2711	NM_010073	13481	Mm.22001	NM_010073	ENSMUSG00000026810	Dpm2	AW557993|R75484	dolichol-phosphate (beta-D) mannosyltransferase 2	protein-coding
unique_peak1-5096-16-1-3.11826364226806-4.46429741251234	chr4	150002259	150002992	+	0	NA	TTS (NM_173774)	TTS (NM_173774)	23658	NM_173774	242773	Mm.29280	NM_173774		Slc45a1	C230078B22|Dnb5	solute carrier family 45, member 1	protein-coding
unique_peak2-33551-2-6--1.72480917832092-1.26211192963361	chr11	80089499	80089833	+	0	NA	Intergenic	(CATA)n|Simple_repeat|Simple_repeat	-24748	NM_139228	246104	Mm.194148	NM_139228	ENSMUSG00000017692	Rhbdl3	AI847581|Rhbdl4|Rhomr1|Vrho	rhomboid, veinlet-like 3 (Drosophila)	protein-coding
common_peak2-28308-16-14-0.211373046659543-0.364171515310935	chr4	133038585	133039463	+	0	NA	intron (NM_175307, intron 1 of 1)	intron (NM_175307, intron 1 of 1)	2976	NM_175307	100342	Mm.204656	NM_175307	ENSMUSG00000046694	Fam46b	4732473B16Rik|AU045678|AU046069	family with sequence similarity 46, member B	protein-coding
common_peak1-13383-14-8-0.729291158915332-0.771068449301682	chr19	46524804	46525392	+	0	NA	exon (NM_015752, exon 5 of 12)	exon (NM_015752, exon 5 of 12)	-51040	NM_053100	93679	Mm.392177	NM_053100	ENSMUSG00000025034	Trim8	AA408830|BB006755|GERP|Rnf27	tripartite motif-containing 8	protein-coding
common_peak1-11648-10-4-1.03448725012141-1.5150158574804	chr16	23166028	23166492	+	0	NA	Intergenic	Intergenic	19651	NM_009605	11450	Mm.3969	NM_009605	ENSMUSG00000022878	Adipoq	30kDa|APN|Acdc|Acrp30|GBP28|adipo|apM1	adiponectin, C1Q and collagen domain containing	protein-coding
common_peak1-17152-30-20-0.777357986713112-1.30767018140166	chr6	118121561	118122924	+	0	NA	intron (NM_001080780, intron 11 of 18)	intron (NM_001080780, intron 11 of 18)	25520	NM_009050	19713	Mm.57199	NM_009050	ENSMUSG00000030110	Ret	PTC|RET51|RET9|c-Ret	ret proto-oncogene	protein-coding
common_peak2-23845-29-25-0.411850362474019-0.664636481544818	chr15	102023705	102024787	+	0	NA	Intergenic	L1MB7|LINE|L1	-4772	NM_144942	246277	Mm.296382	NM_144942	ENSMUSG00000023044	Csad	Csd	cysteine sulfinic acid decarboxylase	protein-coding
common_peak2-24772-28-23-0.467996619100306-0.690880484874617	chr17	56613244	56614048	+	0	NA	intron (NM_001252455, intron 1 of 27)	CpG	2257	NM_001252455	19280	Mm.258771	NM_011218	ENSMUSG00000013236	Ptprs	AL022616|PTP|PTP-NU3|PTPNU-3|PTPsigma|Ptpt9|R-PTP-S|RPTPsigma	protein tyrosine phosphatase, receptor type, S	protein-coding
common_peak1-9964-8-8--0.164702583494742-1.00793137938329	chr12	112678597	112679117	+	0	NA	Intergenic	(GA)n|Simple_repeat|Simple_repeat	-2015	NM_009396	21928	Mm.255332	NM_009396	ENSMUSG00000021281	Tnfaip2	B94|Exoc3l3|M-sec|Tnfip2|tnfb94	tumor necrosis factor, alpha-induced protein 2	protein-coding
common_peak2-19706-28-45--0.470602836235551-0.703513783457792	chr1	64305004	64306498	+	0	NA	Intergenic	Intergenic	-137788	NM_033563	93691	Mm.29466	NM_033563	ENSMUSG00000025959	Klf7	9830124P08Rik	Kruppel-like factor 7 (ubiquitous)	protein-coding
unique_peak1-1881-21-2-2.98452676454508-5.06563262809273	chr14	61737033	61737895	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-19830	NM_172809	50720	Mm.440703	NM_015788	ENSMUSG00000048279	Sacs	A230052M14|DNAJC29|E130115J16Rik|mKIAA0730	sacsin	protein-coding
unique_peak2-38545-9-9--0.132314688483142-1.03275496310833	chr7	49603009	49603384	+	0	NA	Intergenic	L1_Mur2|LINE|L1	82543	NR_028441	628490	Mm.246518	NR_028441	ENSMUSG00000070621	Vmn2r-ps60	Casr-rs4|Gprc2a-rs4	vomeronasal 2, receptor, pseudogene 60	pseudo
common_peak2-27142-38-64--0.450915153729924-0.799068699966534	chr3	27709791	27711311	+	0	NA	Intergenic	Intergenic	84739	NM_001164437	208613	Mm.59189	NM_001164437	ENSMUSG00000043164	Tmem212	E030011K20Rik|Gm564	transmembrane protein 212	protein-coding
unique_peak1-1112-8-2-1.42025991722641-1.65811743852845	chr11	94163176	94163689	+	0	NA	intron (NM_026313, intron 4 of 10)	intron (NM_026313, intron 4 of 10)	19793	NM_026313	67684	Mm.30927	NM_026313	ENSMUSG00000020863	Luc7l3	3300001P08Rik|Luc7a	LUC7-like 3 (S. cerevisiae)	protein-coding
common_peak1-15434-48-34-0.841644134289848-2.21281914625673	chr4	89052649	89054662	+	0	NA	Intergenic	Intergenic	-96714	NM_007670	12579	Mm.423094	NM_007670	ENSMUSG00000073802	Cdkn2b	AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b	cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)	protein-coding
common_peak1-15126-11-27--1.29866133780599-1.81053432848961	chr3	138742358	138742840	+	0	NA	Intergenic	Intergenic	-4434	NM_001040690	229877	Mm.28893	NM_145544	ENSMUSG00000028149	Rap1gds1	BC011279|GDS1	RAP1, GTP-GDP dissociation stimulator 1	protein-coding
unique_peak2-35905-8-6-0.197867495889966-1.03789460276074	chr19	4201793	4202147	+	0	NA	promoter-TSS (NM_011237)	promoter-TSS (NM_011237)	-367	NM_011237	19367	Mm.277629	NM_011237	ENSMUSG00000024824	Rad9a	Rad9	RAD9 homolog A	protein-coding
common_peak2-28031-8-9--0.316705676939792-1.03275496310833	chr4	53714225	53714752	+	0	NA	3' UTR (NM_001195284, exon 13 of 13)	3' UTR (NM_001195284, exon 13 of 13)	-12566	NM_139309	246179	Mm.247210	NM_139309	ENSMUSG00000028414	Fktn	D830030O17Rik|Fcmd	fukutin	protein-coding
common_peak2-24510-15-6-1.20480982849805-1.32521814697968	chr17	26584084	26584379	+	0	NA	TTS (NM_001081656)	TTS (NM_001081656)	32321	NM_001081656	240055	Mm.133211	NM_001081656	ENSMUSG00000034413	Neurl1b	C230078M08Rik|EG240055	neuralized homolog 1b (Drosophila)	protein-coding
common_peak2-27470-7-13--1.00826409175941-0.697979855752659	chr3	90604011	90604564	+	0	NA	Intergenic	L1Md_F3|LINE|L1	73459	NM_207263	384997	Mm.316644	NM_207263	ENSMUSG00000042250	Pglyrp4	Gm1478|Gm413	peptidoglycan recognition protein 4	protein-coding
unique_peak2-34071-3-6--1.22133801201688-1.08602067057793	chr13	3086055	3086397	+	0	NA	Intergenic	Intergenic	-62495	NR_001581	73266	Mm.335891	NR_001581		Speer6-ps1	1700039A02Rik|SPEER-6	spermatogenesis associated glutamate (E)-rich protein 6, pseudogene 1	pseudo
common_peak2-26617-11-9-0.186765489364251-0.344532117358383	chr2	117745899	117746523	+	0	NA	Intergenic	Intergenic	98547	NR_040631	73938	Mm.399107	NR_040631	ENSMUSG00000086221	4930412B13Rik	-	RIKEN cDNA 4930412B13 gene	ncRNA
common_peak2-32326-7-5-0.214128329577033-1.01466476204226	chrX	73479251	73479659	+	0	NA	Intergenic	Intergenic	-30190	NM_001013760	238829	Mm.292319	NM_001013760	ENSMUSG00000071738	Gm4937	EG238829	predicted gene 4937	protein-coding
common_peak1-11074-27-8-1.82162094945292-3.64934937127727	chr15	58517734	58518798	+	0	NA	Intergenic	B1_Mm|SINE|Alu	136716	NM_175212	74868	Mm.293754	NM_175212	ENSMUSG00000062373	Tmem65	2610029O13Rik|4930438D12Rik	transmembrane protein 65	protein-coding
common_peak2-20539-17-28--0.639684656922534-0.677583764578261	chr10	67185644	67186403	+	0	NA	Intergenic	Intergenic	-174320	NM_001005419	211488	Mm.297250	NM_001005419	ENSMUSG00000057134	Ado	Gm237	2-aminoethanethiol (cysteamine) dioxygenase	protein-coding
common_peak1-15566-10-9-0.0344872501214071-1.05503135781948	chr4	126111077	126111670	+	0	NA	TTS (NM_153403)	TTS (NM_153403)	-4587	NM_153402	214150	Mm.440915	NM_153402		Ago3	AW048688|C130014L07Rik|Eif2c3	argonaute RISC catalytic subunit 3	protein-coding
unique_peak2-38446-6-13--1.2419568116773-1.58711810488664	chr7	28013737	28014491	+	0	NA	promoter-TSS (NM_181593)	promoter-TSS (NM_181593)	-498	NM_181593	233011	Mm.30963	NM_181593	ENSMUSG00000003752	Itpkc	9130023N17Rik	inositol 1,4,5-trisphosphate 3-kinase C	protein-coding
unique_peak2-34970-4-25--2.72390023199434-3.9780981129625	chr15	98139184	98139880	+	0	NA	Intergenic	Intergenic	4447	NM_207554	404314	Mm.309892	NM_207554		Olfr257	-	olfactory receptor 257	protein-coding
common_peak1-11915-130-141-0.542183963325179-3.03564798730977	chr17	35241235	35243459	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-2898	NM_148947	114652	Mm.222643	NM_148947	ENSMUSG00000034482	Ly6g5c	G5c|NG33	lymphocyte antigen 6 complex, locus G5C	protein-coding
unique_peak1-4983-11-4-1.18676548936425-1.68134727924692	chr4	111597077	111597616	+	0	NA	intron (NM_001100466, intron 1 of 6)	RLTR13C2|LTR|ERVK	5186	NM_001100466	639774	Mm.248185	NM_001100466	ENSMUSG00000078599	Skint8	OTTMUSG00000009475	selection and upkeep of intraepithelial T cells 8	protein-coding
common_peak2-21988-19-17-0.232762325219374-0.392630012299441	chr12	54162506	54163236	+	0	NA	intron (NM_198111, intron 9 of 13)	intron (NM_198111, intron 9 of 13)	-186793	NM_013780	27386	Mm.247044	NM_013780	ENSMUSG00000021010	Npas3	4930423H22Rik|bHLHe12	neuronal PAS domain protein 3	protein-coding
common_peak1-15855-11-50--2.16373175771988-6.16255954905146	chr5	3647476	3648045	+	0	NA	5' UTR (NM_026033, exon 1 of 5)	5' UTR (NM_026033, exon 1 of 5)	176	NM_026033	67210	Mm.178424	NM_026033	ENSMUSG00000007415	Gatad1	2310031E19Rik|2810047M21Rik|8430439A17Rik|9130430G15Rik|B330017N08Rik|ENSMUSG00000073241|Odag	GATA zinc finger domain containing 1	protein-coding
common_peak2-24814-43-55--0.024791736533901-0.301029995663988	chr17	70750676	70751866	+	0	NA	Intergenic	Intergenic	-22861	NM_177639	224997	Mm.311840	NM_027712	ENSMUSG00000003279	Dlgap1	4933422O14Rik|9630002F18|AI845682|AI848168|BB075781|D17Bwg0511e|GKAP/SAPAP|GKPA/SAPAP|Gkap|Sapap1|mKIAA4162	discs, large (Drosophila) homolog-associated protein 1	protein-coding
unique_peak1-6371-9-4-0.867685311516858-1.36011389749466	chr7	67950655	67951179	+	0	NA	Intergenic	Lx3_Mus|LINE|L1	-665812	NM_001082962	20646	Mm.274995	NM_013670	ENSMUSG00000000948	Snrpn	2410045I01Rik|HCERN3|Peg4|Pwcr1|SMN	small nuclear ribonucleoprotein N	protein-coding
common_peak2-23422-12-8-0.478850983645327-0.562038191119709	chr15	61535147	61535555	+	0	NA	intron (NR_040350, intron 4 of 4)	intron (NR_040350, intron 4 of 4)	70655	NR_040350	432956	Mm.404918	NR_040350		D030024E09Rik	-	RIKEN cDNA D030024E09 gene	ncRNA
common_peak1-17996-11-9-0.186765489364251-0.344532117358383	chr7	139285572	139286210	+	0	NA	intron (NM_018867, intron 4 of 13)	intron (NM_018867, intron 4 of 13)	60533	NM_018867	55987	Mm.471654	NM_018867	ENSMUSG00000030862	Cpxm2	4632435C11Rik|CPX-2|Cpx2	carboxypeptidase X 2 (M14 family)	protein-coding
unique_peak1-4576-11-6-0.701338662194009-1.32595962126035	chr3	57281213	57281808	+	0	NA	intron (NM_133784, intron 3 of 6)	intron (NM_133784, intron 3 of 6)	52178	NM_145539	229302	Mm.26618	NM_145539	ENSMUSG00000027801	Tm4sf4	Iltmp	transmembrane 4 superfamily member 4	protein-coding
common_peak1-10261-30-32-0.12528129013342-0.352152970649944	chr13	55510817	55511772	+	0	NA	intron (NM_011392, intron 10 of 12)	intron (NM_011392, intron 10 of 12)	5299	NM_029303	75477	Mm.432537	NM_029303		Pfn3	1700012P12Rik	profilin 3	protein-coding
unique_peak1-788-9-6-0.382258484346616-1.11707584880836	chr11	63782389	63782915	+	0	NA	intron (NM_178379, intron 6 of 6)	intron (NM_178379, intron 6 of 6)	-46866	NM_018805	54710	Mm.274426	NM_018805	ENSMUSG00000070407	Hs3st3b1	3-OST-3B|3OST3B1|3Ost3b|AU041882|AW536289|Hs3st3b|m3-OST-3B	heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1	protein-coding
unique_peak2-35780-4-9--1.34538860874061-1.36011389749466	chr18	53649582	53650221	+	0	NA	intron (NM_001033281, intron 2 of 6)	RLTR10C|LTR|ERVK	25701	NM_001033281	225518	Mm.297645	NM_001033281	ENSMUSG00000069378	Prdm6	Gm92|PRISM	PR domain containing 6	protein-coding
common_peak2-25769-14-7-0.899216160357645-0.947446088118041	chr19	32224138	32224557	+	0	NA	intron (NM_144792, intron 6 of 9)	intron (NM_144792, intron 6 of 9)	-46717	NM_018830	54447	Mm.491229	NM_018830	ENSMUSG00000024887	Asah2	AI585898	N-acylsphingosine amidohydrolase 2	protein-coding
common_peak1-7902-11-11--0.0762689164695427-0.301029995663976	chr1	135730285	135730818	+	0	NA	Intergenic	MTD|LTR|MaLR	73199	NM_054076	269120	Mm.59985	NM_054076	ENSMUSG00000010311	Optc	-	opticin	protein-coding
common_peak2-23853-19-26--0.352200175501782-0.416752705545949	chr15	102073958	102074489	+	0	NA	intron (NM_011244, intron 3 of 9)	intron (NM_011244, intron 3 of 9)	2708	NM_001042727	19411	Mm.1273	NM_011244	ENSMUSG00000001288	Rarg	Nr1b3|RAR-gamma|RARD|RARgamma2	retinoic acid receptor, gamma	protein-coding
unique_peak1-1721-8-1-2.00522241794757-2.05605744720049	chr13	96942580	96943054	+	0	NA	Intergenic	Intergenic	-40285	NM_029210	75209	Mm.40436	NM_029210	ENSMUSG00000051111	Sv2c	4930527L09Rik|AI841971	synaptic vesicle glycoprotein 2c	protein-coding
common_peak2-31677-8-9--0.316705676939792-1.03275496310833	chr8	126848492	126848869	+	0	NA	intron (NM_139272, intron 6 of 15)	intron (NM_139272, intron 6 of 15)	93386	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
unique_peak1-1999-10-3-1.35641534500877-1.75805390616669	chr15	97812140	97812632	+	0	NA	intron (NM_001113515, intron 39 of 52)	intron (NM_001113515, intron 39 of 52)	17726	NM_001252153	380967	Mm.196630	NM_201359	ENSMUSG00000052369	Tmem106c	AI046681|BC046621|D15Ertd405e	transmembrane protein 106C	protein-coding
common_peak1-15168-64-62-0.488166478208687-1.2846003850156	chr3	152118958	152121199	+	0	NA	intron (NM_001287139, intron 12 of 13)	B1_Mus1|SINE|Alu	60430	NM_001287139	108946	Mm.379292	NM_198416	ENSMUSG00000039068	Zzz3	3110065C23Rik|6430567E01Rik|AA408566|AI481057|AW556059|R75514	zinc finger, ZZ domain containing 3	protein-coding
common_peak1-16532-37-50--0.146432270485676-0.337231681760967	chr5	142909189	142910581	+	0	NA	intron (NM_199068, intron 1 of 8)	B4|SINE|B4	-30000	NM_172725	231855	Mm.78250	NM_172725	ENSMUSG00000039623	Ap5z1	C330006K01Rik	adaptor-related protein complex 5, zeta 1 subunit	protein-coding
common_peak1-8431-10-12--0.344024373132323-0.340565874754526	chr10	77515141	77515651	+	0	NA	intron (NM_001081695, intron 7 of 13)	intron (NM_001081695, intron 7 of 13)	-2684	NM_001284198	54427	Mm.13433	NM_019448	ENSMUSG00000000730	Dnmt3l	D6Ertd14e|ecat7	DNA (cytosine-5-)-methyltransferase 3-like	protein-coding
unique_peak2-34073-7-11--0.785871670422967-1.21681515183528	chr13	3742604	3743231	+	0	NA	Intergenic	Intergenic	60647	NM_027416	70405	Mm.20079	NM_027416	ENSMUSG00000063130	Calml3	2310068O22Rik|AI326174	calmodulin-like 3	protein-coding
common_peak1-16919-12-18--0.599151528355947-0.476916024233333	chr6	73222761	73223422	+	0	NA	intron (NM_019879, intron 7 of 8)	ORR1E|LTR|MaLR	24592	NM_019879	56451	Mm.29845	NM_019879	ENSMUSG00000052738	Suclg1	1500000I01Rik|Sucla1	succinate-CoA ligase, GDP-forming, alpha subunit	protein-coding
unique_peak2-36641-5-12--1.40482005414695-1.62698961692433	chr3	9002446	9003007	+	0	NA	intron (NM_009412, intron 1 of 5)	intron (NM_009412, intron 1 of 5)	1789	NM_009412	21985	Mm.371590	NM_009412	ENSMUSG00000027506	Tpd52	AI043038|mD52	tumor protein D52	protein-coding
common_peak2-31175-24-27--0.0141450192898871-0.304978344874324	chr8	46686742	46687376	+	0	NA	intron (NM_172752, intron 1 of 22)	L2a|LINE|L2	93917	NM_001205219	234214	Mm.211096	NM_172752	ENSMUSG00000031626	Sorbs2	2010203O03Rik|9430041O17Rik|A530071H08|Argbp2|mKIAA0777	sorbin and SH3 domain containing 2	protein-coding
common_peak2-20526-11-15--0.491306415748387-0.435191258261915	chr10	62413157	62413839	+	0	NA	exon (NM_177372, exon 3 of 21)	exon (NM_177372, exon 3 of 21)	3721	NM_177372	327762	Mm.21492	NM_177372	ENSMUSG00000036875	Dna2	Dna2l|E130315B21Rik	DNA replication helicase 2 homolog (yeast)	protein-coding
common_peak1-11897-34-14-1.47517793139275-3.48244293670685	chr17	5799525	5800864	+	0	NA	intron (NR_045080, intron 1 of 1)	(GGAGA)n|Simple_repeat|Simple_repeat	704	NR_045080	78512	Mm.23696	NR_045079	ENSMUSG00000096965	3300005D01Rik	-	RIKEN cDNA 3300005D01 gene	ncRNA
unique_peak2-36094-0-6--3.64748585253182-1.56314192529759	chr19	57341784	57342202	+	0	NA	Intergenic	Intergenic	-6457	NR_045319	78120	Mm.445892	NR_045319		4930449E18Rik	-	RIKEN cDNA 4930449E18 gene	ncRNA
common_peak2-21057-43-53-0.0276756833602345-0.309072945808617	chr11	45851682	45852792	+	0	NA	Intergenic	B4A|SINE|B4	-15767	NM_001291890	11492	Mm.89940	NM_009616	ENSMUSG00000011256	Adam19	AL024287|Mltnb	a disintegrin and metallopeptidase domain 19 (meltrin beta)	protein-coding
unique_peak2-33771-11-29--1.39819701135691-2.12469164491494	chr11	118289682	118290239	+	0	NA	intron (NM_001204129, intron 1 of 3)	intron (NM_001204129, intron 1 of 3)	189	NM_001204129	56745	Mm.23845	NM_019959		C1qtnf1	1600017K21Rik|CTRP1|Zsig37	C1q and tumor necrosis factor related protein 1	protein-coding
common_peak2-30769-6-9--0.75652998450706-1.11707584880836	chr7	125444480	125444929	+	0	NA	Intergenic	Intergenic	57283	NR_027879	67745	Mm.483404	NM_183267	ENSMUSG00000055159	4930583K01Rik	-	RIKEN cDNA 4930583K01 gene	ncRNA
unique_peak1-1714-10-2-1.77145284428761-2.09384600808989	chr13	94467676	94468200	+	0	NA	intron (NM_028772, intron 5 of 15)	intron (NM_028772, intron 5 of 15)	21192	NR_045086	105364	Mm.443795	NR_045086	ENSMUSG00000087334	AW495222	-	expressed sequence AW495222	ncRNA
common_peak2-26621-8-12--0.695217300193522-0.475924844171029	chr2	118479173	118479813	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-9820	NM_001033254	214230	Mm.241857	NM_001033254	ENSMUSG00000074923	Pak6	4732456M09	p21 protein (Cdc42/Rac)-activated kinase 6	protein-coding
common_peak2-31915-9-6-0.382258484346616-1.11707584880836	chr9	60841129	60841586	+	0	NA	Intergenic	Intergenic	-23519	NR_040767	330956	Mm.207985	NR_040767		Gm5122	A430102L10	predicted gene 5122	ncRNA
common_peak1-12231-19-35--0.767237674780626-1.06916698217164	chr17	35051293	35052091	+	0	NA	TTS (NM_001286575)	TTS (NM_001286575)	281	NM_023557	70129	Mm.183126	NM_023557	ENSMUSG00000007034	Slc44a4	2210409B01Rik|NG22	solute carrier family 44, member 4	protein-coding
unique_peak1-1085-11-2-1.92373108353046-2.32232533660526	chr11	87467703	87468304	+	0	NA	intron (NM_001045527, intron 5 of 5)	B3|SINE|B2	-8586	NM_172448	207742	Mm.440230	NM_172448	ENSMUSG00000034177	Rnf43	4732452J19Rik	ring finger protein 43	protein-coding
unique_peak1-1165-12-2-2.06381348436648-2.79529063155376	chr11	99109158	99109733	+	0	NA	Intergenic	Intergenic	-4064	NM_172946	268481	Mm.133193	NM_172946	ENSMUSG00000035849	Krt222	6330509G02Rik	keratin 222	protein-coding
unique_peak2-35916-8-17--1.16470258349474-1.02063122982878	chr19	5797141	5798051	+	0	NA	non-coding (NR_002847, exon 1 of 1)	non-coding (NR_002847, exon 1 of 1)	5075	NR_002847	72289	Mm.298256	NR_002847	ENSMUSG00000092341	Malat1	2210401K01Rik|9430072K23Rik|AI647968|Neat2	metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)	ncRNA
common_peak1-8002-20-31--0.511925215408807-0.634510163964152	chr1	165460505	165461520	+	0	NA	Intergenic	Intergenic	-127240	NM_178883	98376	Mm.32901	NM_178883	ENSMUSG00000040124	Gorab	AI467484|NTKL-BP1|Scyl1bp1	golgin, RAB6-interacting	protein-coding
unique_peak2-38135-3-5--0.998945590680433-0.96108193396963	chr6	84242317	84242729	+	0	NA	Intergenic	MTB|LTR|MaLR	131309	NR_046063	100038556	Mm.387783	NR_046063		Gm10445	ENSMUSG00000072956	predicted gene 10445	ncRNA
common_peak2-21188-29-27-0.304935158557507-0.525808162491371	chr11	60221931	60222962	+	0	NA	intron (NM_145427, intron 3 of 7)	intron (NM_145427, intron 3 of 7)	8155	NM_145427	246782	Mm.41651	NM_145427	ENSMUSG00000042709	Atpaf2	ATP12|ATP12p	ATP synthase mitochondrial F1 complex assembly factor 2	protein-coding
common_peak2-28223-9-13--0.617741515653384-0.459837087125828	chr4	119105219	119105803	+	0	NA	intron (NM_001014900, intron 1 of 7)	intron (NM_001014900, intron 1 of 7)	10222	NM_001014900	332934	Mm.388911	NM_001014900	ENSMUSG00000070806	Zmynd12	AI414736	zinc finger, MYND domain containing 12	protein-coding
common_peak1-12083-10-8-0.186490343566457-1.078512453669	chr17	24632664	24633190	+	0	NA	exon (NM_027937, exon 2 of 20)	exon (NM_027937, exon 2 of 20)	7199	NM_027937	268932	Mm.70989	NM_027937	ENSMUSG00000033597	Caskin1	3300002N10Rik|C130061I24|C630036E02Rik|mKIAA1306	CASK interacting protein 1	protein-coding
common_peak2-32061-66-123--0.435712645961034-1.27501900440191	chr9	88481481	88483455	+	0	NA	intron (NM_001034906, intron 6 of 6)	intron (NM_001034906, intron 6 of 6)	6594	NM_001034906	547109	Mm.304302	NM_001034906	ENSMUSG00000090693	Trim43a	EG547109|Gm6021	tripartite motif-containing 43A	protein-coding
common_peak1-11281-45-61--0.0938382850420032-0.317454636273734	chr15	82898970	82900150	+	0	NA	Intergenic	B3A|SINE|B2	-31075	NM_023475	68607	Mm.30056	NM_023475	ENSMUSG00000058586	Serhl	0610008B10Rik|1110019M09Rik|AU019786	serine hydrolase-like	protein-coding
unique_peak1-5903-17-1-3.21829633820504-4.59734841376773	chr6	87745441	87746201	+	0	NA	intron (NR_104478, intron 1 of 2)	L1MEc|LINE|L1	13930	NM_133717	69834	Mm.37380	NM_133717	ENSMUSG00000030055	Rab43	1810048P08Rik|2500004H21Rik|AW490415	RAB43, member RAS oncogene family	protein-coding
unique_peak2-37289-10-31--1.64358465499123-2.75133420124051	chr4	118427610	118429229	+	0	NA	Intergenic	Intergenic	-1278	NM_207152	258259	Mm.377398	NM_207152	ENSMUSG00000095218	Olfr1338	MOR259-4P|MOR259-9|Olfr1524-ps1	olfactory receptor 1338	protein-coding
common_peak1-16384-67-85-0.118146728080897-0.379131714100395	chr5	123683579	123685151	+	0	NA	intron (NM_026000, intron 1 of 5)	RSINE1|SINE|B4	6166	NM_026000	67151	Mm.278997	NM_026000	ENSMUSG00000029440	Psmd9	1500011J20Rik|2610202L11Rik|Bridge-1|P27	proteasome (prosome, macropain) 26S subunit, non-ATPase, 9	protein-coding
unique_peak1-6425-11-3-1.50869358425161-1.95434855131066	chr7	91715852	91716430	+	0	NA	intron (NR_045098, intron 1 of 2)	(GGGAGA)n|Simple_repeat|Simple_repeat	38311	NM_010176	14085	Mm.3798	NM_010176	ENSMUSG00000030630	Fah	-	fumarylacetoacetate hydrolase	protein-coding
common_peak2-22966-10-22--1.16714661104824-1.30248952876293	chr14	54464155	54464792	+	0	NA	Intergenic	Intergenic	178858	NM_001205242	100568452	Mm.213248	NM_001205242		A430107P09Rik	Va10	RIKEN cDNA A430107P09 gene	protein-coding
common_peak2-20951-20-37--0.759852728852392-1.13829382151971	chr11	12464509	12465343	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-99963	NM_001282993	12808	Mm.22847	NM_172496	ENSMUSG00000020173	Cobl	-	cordon-bleu WH2 repeat	protein-coding
unique_peak2-32443-6-13--1.2419568116773-1.58711810488664	chr1	135429882	135430424	+	0	NA	Intergenic	RLTR20B3|LTR|ERVK	76704	NM_009227	20643	Mm.249110	NM_009227	ENSMUSG00000090553	Snrpe	AL022645|C76690|SME	small nuclear ribonucleoprotein E	protein-coding
common_peak2-20807-10-17--0.813509656433543-0.699649909729472	chr10	127211167	127211836	+	0	NA	Intergenic	MTB-int|LTR|MaLR	-1960	NM_153133	103142	Mm.235814	NM_153133	ENSMUSG00000056148	Rdh9	AI121090|Crad3	retinol dehydrogenase 9	protein-coding
unique_peak2-36478-4-10--1.48289213249054-1.5150158574804	chr2	150450928	150451463	+	0	NA	intron (NM_080575, intron 10 of 13)	intron (NM_080575, intron 10 of 13)	-16936	NM_027977	71881	Mm.26599	NM_027977	ENSMUSG00000033096	Apmap	2310001A20Rik|AI314817	adipocyte plasma membrane associated protein	protein-coding
unique_peak1-2831-9-2-1.60465090568306-1.87199725847353	chr17	27549671	27550151	+	0	NA	Intergenic	Intergenic	54869	NR_106077	102466228		NR_106077		Mir7218	mmu-mir-7218	microRNA mir-7218	ncRNA
unique_peak2-38675-5-14--1.61127093161437-1.95509489018123	chr7	99587055	99587693	+	0	NA	intron (NM_001243046, intron 13 of 14)	intron (NM_001243046, intron 13 of 14)	-122285	NM_025515	66365	Mm.21173	NM_025515	ENSMUSG00000030613	Ccdc90b	2310015N07Rik|C86558	coiled-coil domain containing 90B	protein-coding
unique_peak1-5772-7-4-0.477162735410827-1.09384600808989	chr6	54084911	54085403	+	0	NA	intron (NM_001163640, intron 1 of 12)	URR1A|DNA|MER1_type	95231	NM_001163640	69993	Mm.321147	NM_023543	ENSMUSG00000004633	Chn2	1700026N20Rik|4930557O16Rik|ARHGAP3|Bch	chimerin 2	protein-coding
common_peak2-23550-148-183-0.393692171585107-2.08535086940653	chr15	79027521	79029151	+	0	NA	intron (NR_029470, intron 2 of 4)	intron (NR_029470, intron 2 of 4)	-31267	NM_008837	18693	Mm.259464	NM_008837	ENSMUSG00000068206	Pick1	Prkcabp	protein interacting with C kinase 1	protein-coding
unique_peak2-36892-3-4--0.73591118484664-0.864171920961574	chr3	95733548	95733900	+	0	NA	intron (NM_001253758, intron 1 of 4)	CpG	544	NM_023210	66471	Mm.218657	NM_023210	ENSMUSG00000015749	Anp32e	2810018A15Rik|AI047746|AI326868|CPD1|LANP-L|LANPL|mLANP-L	acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	protein-coding
common_peak2-28835-30-26-0.414787907328405-0.652802052802684	chr5	66543033	66543857	+	0	NA	promoter-TSS (NM_001127382)	promoter-TSS (NM_001127382)	-252	NM_001127382	245945	Mm.36863	NM_139065	ENSMUSG00000070780	Rbm47	9530077J19Rik	RNA binding motif protein 47	protein-coding
common_peak1-17720-8-9--0.316705676939792-1.03275496310833	chr7	79920446	79920967	+	0	NA	Intergenic	Intergenic	326248	NR_046024	625243	Mm.261798	NR_046024		Gm6567	-	predicted gene 6567	ncRNA
common_peak2-22098-34-56--0.450821487163475-0.736813861928694	chr12	80131982	80132913	+	0	NA	intron (NM_181073, intron 1 of 28)	B3A|SINE|B2	2297	NM_181073	211945	Mm.478321	NM_181073	ENSMUSG00000060716	Plekhh1	AV308913|C77772|D630024D12Rik|mKIAA1200	pleckstrin homology domain containing, family H (with MyTH4 domain) member 1	protein-coding
unique_peak2-38667-4-9--1.34538860874061-1.36011389749466	chr7	98361331	98361735	+	0	NA	intron (NM_011807, intron 1 of 22)	Lx9|LINE|L1	122237	NM_011807	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
unique_peak2-34050-3-4--0.73591118484664-0.864171920961574	chr12	113043754	113044141	+	0	NA	intron (NM_028875, intron 5 of 7)	intron (NM_028875, intron 5 of 7)	8105	NM_028875	74335	Mm.19082	NM_028875	ENSMUSG00000021287	Xrcc3	4432412E01Rik|AI182522|AW537713	X-ray repair complementing defective repair in Chinese hamster cells 3	protein-coding
common_peak1-8718-86-109-0.194276080507693-0.568308303182459	chr11	101645471	101646622	+	0	NA	intron (NM_008815, intron 1 of 12)	CpG-2642	578	NM_008815	18612	Mm.5025	NM_008815	ENSMUSG00000017724	Etv4	AW414408|Pea-3|Pea3	ets variant 4	protein-coding
common_peak1-13365-69-92-0.0559836361507013-0.329756527030102	chr19	45997577	45999010	+	0	NA	intron (NM_198296, intron 19 of 25)	intron (NM_198296, intron 19 of 25)	74685	NM_198296	71617	Mm.210949	NM_198296	ENSMUSG00000039901	9130011E15Rik	AI431055|AW050122	RIKEN cDNA 9130011E15 gene	protein-coding
common_peak2-25918-17-9-0.896368243317676-1.09394599973099	chr19	46358030	46358561	+	0	NA	intron (NM_178930, intron 36 of 39)	intron (NM_178930, intron 36 of 39)	-20932	NM_001177369	18034	Mm.102365	NM_019408	ENSMUSG00000025225	Nfkb2	NF-kappaB2|lyt|p49|p49/p100|p50B|p52	nuclear factor of kappa light polypeptide gene enhancer in B cells 2, p49/p100	protein-coding
common_peak2-23720-26-28-0.0699180970308904-0.316008636696532	chr15	90224284	90224903	+	0	NA	Intergenic	Intergenic	169802	NR_106106	102466838		NR_106106		Mir7648	mmu-mir-7648	microRNA mir-7648	ncRNA
common_peak2-30455-19-18-0.154759813218101-0.351190433797598	chr7	45559106	45560044	+	0	NA	Intergenic	Intergenic	960329	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak2-34115-8-20--1.38709500483119-1.45476480588849	chr13	21735024	21735594	+	0	NA	Intergenic	Intergenic	-3919	NM_146542	218066	Mm.484775	NM_146542	ENSMUSG00000036658	Olfr11	M49|MOR256-11|ORL121	olfactory receptor 11	protein-coding
common_peak1-16245-12-34--1.48050703185733-2.41238722831792	chr5	104046923	104047524	+	0	NA	intron (NM_029415, intron 2 of 5)	MIR|SINE|MIR	11199	NM_029415	75750	Mm.7446	NM_029415	ENSMUSG00000029321	Slc10a6	8430417G17Rik|C78479|Soat	solute carrier family 10 (sodium/bile acid cotransporter family), member 6	protein-coding
common_peak1-16837-114-164-0.0976323074625514-0.408674506502026	chr6	51468699	51471572	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	-3767	NM_001127349	71982	Mm.294166	NM_028035	ENSMUSG00000038301	Snx10	2410004M09Rik	sorting nexin 10	protein-coding
unique_peak1-385-10-3-1.35641534500877-1.75805390616669	chr1	153119599	153120141	+	0	NA	Intergenic	Intergenic	-71758	NM_001039512	117198	Mm.33764	NM_028582	ENSMUSG00000023150	Ivns1abp	1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850	influenza virus NS1A binding protein	protein-coding
unique_peak1-278-16-2-2.53330114154691-3.78760380288747	chr1	105924538	105925164	+	0	NA	Intergenic	RLTR20D|LTR|ERVK	-740545	NM_011800	23836	Mm.103640	NM_011800	ENSMUSG00000050840	Cdh20	Cdh7	cadherin 20	protein-coding
unique_peak2-35868-0-5--3.42509343119537-1.32905871926422	chr18	79009580	79009994	+	0	NA	intron (NM_053099, intron 4 of 5)	intron (NM_053099, intron 4 of 5)	-216098	NM_030683	27411	Mm.44158	NM_030683	ENSMUSG00000024552	Slc14a2	UT-A1|UT-A3	solute carrier family 14 (urea transporter), member 2	protein-coding
common_peak1-16510-11-7-0.508693584251613-1.21681515183528	chr5	139877051	139877573	+	0	NA	intron (NM_028469, intron 2 of 4)	B2_Mm2|SINE|B2	-5029	NM_177000	319772	Mm.440271	NM_177000		C130050O18Rik	-	RIKEN cDNA C130050O18 gene	protein-coding
common_peak1-10092-9-6-0.382258484346616-1.11707584880836	chr13	24552988	24553649	+	0	NA	intron (NM_001284520, intron 11 of 14)	RLTR21|LTR|ERVK	46327	NM_001284520	12763	Mm.8396	NM_007717	ENSMUSG00000016756	Cmah	-	cytidine monophospho-N-acetylneuraminic acid hydroxylase	protein-coding
unique_peak1-3457-18-9-0.990991056340989-1.23014042908325	chr19	9046812	9047718	+	0	NA	intron (NM_026007, intron 6 of 9)	intron (NM_026007, intron 6 of 9)	5734	NM_026007	67160	Mm.247762	NM_026007	ENSMUSG00000071644	Eef1g	2610301D06Rik|AA407312|EF1G	eukaryotic translation elongation factor 1 gamma	protein-coding
unique_peak1-6216-16-5-1.53330114154691-1.80287260729378	chr7	116457141	116457868	+	0	NA	intron (NM_054103, intron 12 of 13)	intron (NM_054103, intron 12 of 13)	125063	NM_054103	117229	Mm.389950	NM_054103	ENSMUSG00000031027	Stk33	4921505G21Rik|AW061264	serine/threonine kinase 33	protein-coding
common_peak2-20035-31-55--0.58211625124448-1.0707211936214	chr1	138347981	138349555	+	0	NA	Intergenic	Intergenic	-15657	NM_001287179	381293	Mm.458468	NM_001081258	ENSMUSG00000041498	Kif14	D1Ertd367e|E130203M01	kinesin family member 14	protein-coding
common_peak2-27546-11-14--0.398197011356905-0.379391706698377	chr3	96221736	96222362	+	0	NA	Intergenic	RLTR47_MM|LTR|ERV1	-3293	NR_001579	21748		NR_001579	ENSMUSG00000064796	Terc	mTER|mTR	telomerase RNA component	ncRNA
unique_peak1-6636-10-3-1.35641534500877-1.75805390616669	chr8	10947883	10948451	+	0	NA	Intergenic	Intergenic	-19710	NR_030715	665306	Mm.358758	NR_030715	ENSMUSG00000038917	3930402G23Rik	-	RIKEN cDNA 3930402G23 gene	ncRNA
common_peak1-10156-30-24-0.525819219717149-0.825714541185123	chr13	36734546	36735686	+	0	NA	Intergenic	Intergenic	91230	NM_153529	68404	Mm.232930	NM_153529	ENSMUSG00000039114	Nrn1	0710008J23Rik|Cpg15|Nrn	neuritin 1	protein-coding
common_peak1-14277-48-85--0.455337603467283-1.01379877677007	chr2	156720310	156722054	+	0	NA	Intergenic	Intergenic	-8368	NM_029983	77799	Mm.29264	NM_029983	ENSMUSG00000027636	Sla2	A930009E21Rik|AI430952|SLAP-2|SLAP2	Src-like-adaptor 2	protein-coding
unique_peak2-38682-7-7--0.200909169701811-0.97990265578305	chr7	100706618	100707107	+	0	NA	Intergenic	Intergenic	478473	NM_021427	58238	Mm.113787	NM_021427		Fam181b	A830059I20Rik|AB041569	family with sequence similarity 181, member B	protein-coding
unique_peak1-940-9-1-2.18961340640422-2.31132995230379	chr11	54113396	54113951	+	0	NA	Intergenic	Intergenic	-3653	NM_001033598	216739	Mm.267478	NM_144823	ENSMUSG00000020333	Acsl6	A330035H04Rik|AW050338|Facl6|LACS|Lacsl|mKIAA0837	acyl-CoA synthetase long-chain family member 6	protein-coding
common_peak2-27973-13-12-0.0780323124966764-0.334470287753051	chr4	43030708	43031346	+	0	NA	exon (NM_020035, exon 9 of 10)	exon (NM_020035, exon 9 of 10)	7601	NM_020035	56703	Mm.143738	NM_020035	ENSMUSG00000028454	Pigo	mFLJ00350	phosphatidylinositol glycan anchor biosynthesis, class O	protein-coding
unique_peak2-33577-7-8--0.370834171144123-1.00793137938329	chr11	86598154	86598528	+	0	NA	intron (NM_026191, intron 12 of 17)	intron (NM_026191, intron 12 of 17)	22821	NM_026191	67487	Mm.260627	NM_026191	ENSMUSG00000018425	Dhx40	2410016C14Rik|ARG147|DDX40|PAD	DEAH (Asp-Glu-Ala-His) box polypeptide 40	protein-coding
unique_peak1-5670-37-9-2.20406497659846-6.21277467730586	chr6	31090010	31091344	+	0	NA	intron (NR_110471, intron 2 of 3)	intron (NR_110471, intron 2 of 3)	-77584	NR_029532	387223		NR_029532	miRBase:MI0000143	Mir29b-1	Mirn29b|Mirn29b-1	microRNA 29b-1	ncRNA
unique_peak1-6930-13-0-3.77847203063777-4.51544993495972	chr8	107222550	107223128	+	0	NA	Intergenic	Intergenic	-35064	NM_001190330	102022	Mm.212983	NM_133960	ENSMUSG00000055730	Ces2a	9130231C15Rik|AI266984|Ces6	carboxylesterase 2A	protein-coding
unique_peak2-38824-3-6--1.22133801201688-1.08602067057793	chr7	141123243	141123676	+	0	NA	exon (NM_007400, exon 13 of 23)	exon (NM_007400, exon 13 of 23)	-148991	NM_001286031	101437	Mm.199223	NM_133941	ENSMUSG00000030986	Dhx32	3110079L04Rik|4732469F02Rik|AA408140|Ddx32	DEAH (Asp-Glu-Ala-His) box polypeptide 32	protein-coding
common_peak1-10555-23-41--0.67054991826968-1.0364730969458	chr14	20640856	20641593	+	0	NA	intron (NM_026528, intron 2 of 7)	ORR1D1|LTR|MaLR	1821	NM_026528	68045	Mm.21932	NM_026528	ENSMUSG00000021807	2700060E02Rik	-	RIKEN cDNA 2700060E02 gene	protein-coding
common_peak2-22522-9-15--0.81038659359578-0.630231561310125	chr13	54694187	54694813	+	0	NA	3' UTR (NM_028870, exon 5 of 5)	3' UTR (NM_028870, exon 5 of 5)	2908	NM_025933	67044	Mm.29353	NM_025933	ENSMUSG00000025868	Higd2a	2010110M21Rik|AA690237	HIG1 domain family, member 2A	protein-coding
common_peak2-30428-47-50-0.262416082795053-0.538129021504633	chr7	44245862	44247127	+	0	NA	Intergenic	Intergenic	2273410	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak2-27795-15-21--0.447266868081641-0.448200956659578	chr3	138527182	138527895	+	0	NA	intron (NR_121195, intron 1 of 7)	intron (NR_121195, intron 1 of 7)	122366	NM_019571	56224	Mm.31927	NM_019571	ENSMUSG00000028152	Tspan5	2810455A09Rik|4930505M03Rik|NET-4|Tm4sf9	tetraspanin 5	protein-coding
unique_peak1-5443-11-2-1.92373108353046-2.32232533660526	chr5	117123505	117124152	+	0	NA	Intergenic	MLT1E|LTR|MaLR	-82002	NM_026886	68955	Mm.146779	NM_026886	ENSMUSG00000063919	Srrm4	1500001A10Rik|B230202K19Rik|bv|mKIAA1853|nSR100	serine/arginine repetitive matrix 4	protein-coding
common_peak2-20279-28-25-0.352519401680371-0.541406350295756	chr1	191277967	191278771	+	0	NA	Intergenic	RLTR10|LTR|ERVK	-52217	NM_001281848	16526	Mm.33304	NM_010607	ENSMUSG00000037624	Kcnk2	A430027H14Rik|AI848635|TREK-1	potassium channel, subfamily K, member 2	protein-coding
unique_peak2-34902-3-8--1.58390809140159-1.39487600375387	chr15	82364284	82364719	+	0	NA	Intergenic	RLTR13D5|LTR|ERVK	-21027	NM_201360	380997	Mm.482248	NM_201360	ENSMUSG00000096852	Cyp2d12	9030605E09Rik	cytochrome P450, family 2, subfamily d, polypeptide 12	protein-coding
common_peak1-17913-9-15--0.81038659359578-0.630231561310125	chr7	125552295	125552769	+	0	NA	intron (NM_138649, intron 6 of 7)	intron (NM_138649, intron 6 of 7)	34534	NM_138649	110058	Mm.156558	NM_138649	ENSMUSG00000058420	Syt17	Bk	synaptotagmin XVII	protein-coding
common_peak1-18732-23-16-0.634304663258741-0.82304638657543	chr8	123684200	123685238	+	0	NA	Intergenic	Intergenic	33134	NM_008024	14241	Mm.5111	NM_008024	ENSMUSG00000097084	Foxl1	FREAC7|Fkh6|fkh-6	forkhead box L1	protein-coding
unique_peak2-32651-5-5--0.289342836727009-0.909929411522249	chr1	133183383	133183796	+	0	NA	3' UTR (NM_001081011, exon 23 of 23)	3' UTR (NM_001081011, exon 23 of 23)	-7449	NM_019777	56489	Mm.386783	NM_019777	ENSMUSG00000042349	Ikbke	AW558201|IKK-i|IKKepsilon|Ikki	inhibitor of kappaB kinase epsilon	protein-coding
common_peak2-23157-22-28--0.210696890040167-0.337923771396236	chr14	121035338	121036391	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	158181	NM_029519	76108	Mm.261448	NM_029519	ENSMUSG00000051615	Rap2a	5830461H18Rik	RAS related protein 2a	protein-coding
unique_peak1-4735-24-8-1.6232849013254-2.85636458546265	chr3	107793022	107794132	+	0	NA	Intergenic	L1Md_A|LINE|L1	-4223	NM_008183	14863	Mm.440086	NM_008183	ENSMUSG00000040562	Gstm2	Gstb-2|Gstb2	glutathione S-transferase, mu 2	protein-coding
common_peak1-8242-30-25-0.469235691350781-0.734130039933318	chr10	17574843	17576187	+	0	NA	Intergenic	RMER3D-int|LTR|ERVK	59490	NM_138628	378431	Mm.283493	NM_138628	ENSMUSG00000039891	Txlnb	2310001N14Rik|Mdp77	taxilin beta	protein-coding
unique_peak1-1617-19-3-2.40268732666169-3.59864904409227	chr13	41583525	41584328	+	0	NA	Intergenic	Intergenic	-1197	NM_001111324	18003	Mm.288980	NM_017464	ENSMUSG00000021365	Nedd9	Cas-L|CasL|HEF1|MEF1|Nedd-9|p105	neural precursor cell expressed, developmentally down-regulated gene 9	protein-coding
unique_peak2-35514-1-9--2.94898510510411-2.31132995230379	chr17	47925008	47925484	+	0	NA	intron (NM_001161722, intron 6 of 8)	intron (NM_001161722, intron 6 of 8)	2553	NM_011549	21425	Mm.2305	NM_011549	ENSMUSG00000023990	Tfeb	Tcfeb|bHLHe35	transcription factor EB	protein-coding
unique_peak1-6921-9-1-2.18961340640422-2.31132995230379	chr8	106583794	106584265	+	0	NA	Intergenic	Intergenic	-41496	NM_009868	12562	Mm.21767	NM_009868	ENSMUSG00000031871	Cdh5	7B4|AA408225|Cd144|VE-Cad|VECD|VEcad|Vec	cadherin 5	protein-coding
unique_peak2-36558-3-6--1.22133801201688-1.08602067057793	chr2	168158587	168158897	+	0	NA	Intergenic	Intergenic	-63911	NM_001081134	241794	Mm.425102	NM_001081134	ENSMUSG00000074575	Kcng1	AW536275|OTTMUSG00000016048	potassium voltage-gated channel, subfamily G, member 1	protein-coding
common_peak1-12743-25-8-1.69192490390279-3.04993787975775	chr18	56977503	56978364	+	0	NA	intron (NM_177115, intron 1 of 4)	intron (NM_177115, intron 1 of 4)	107269	NM_177115	320253	Mm.312623	NM_177115	ENSMUSG00000032656	March3	6330411I15Rik|A530081L18Rik|AI843639|MARCH-III	membrane-associated ring finger (C3HC4) 3	protein-coding
unique_peak2-38552-1-4--1.94898510510411-1.10720996964787	chr7	60155541	60155745	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-884557	NM_001195601	100503036	Mm.279725	NM_001195601	ENSMUSG00000094445	1700015G11Rik	Ccdc179	RIKEN cDNA 1700015G11 gene	protein-coding
unique_peak1-3794-11-0-3.50869358425161-3.61235994796777	chr19	57147605	57148130	+	0	NA	intron (NM_001290813, intron 8 of 20)	intron (NM_001290813, intron 8 of 20)	45647	NM_001103178	226251	Mm.217161	NM_178688	ENSMUSG00000025085	Ablim1	2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059	actin-binding LIM protein 1	protein-coding
unique_peak1-4093-9-1-2.18961340640422-2.31132995230379	chr2	72288094	72288580	+	0	NA	Intergenic	Intergenic	-25939	NM_025866	66953	Mm.270676	NM_025866	ENSMUSG00000055612	Cdca7	2310021G01Rik|AU044109|JPO1	cell division cycle associated 7	protein-coding
unique_peak1-5378-9-3-1.18961340640422-1.57096726280955	chr5	99428649	99429287	+	0	NA	intron (NM_008926, intron 2 of 18)	intron (NM_008926, intron 2 of 18)	37130	NM_008926	19092	Mm.263002	NM_008926	ENSMUSG00000029334	Prkg2	AW212535|CGKII|Prkgr2|cGK-II	protein kinase, cGMP-dependent, type II	protein-coding
unique_peak2-36994-3-8--1.58390809140159-1.39487600375387	chr3	121565894	121566417	+	0	NA	Intergenic	Intergenic	-48022	NM_008991	19299	Mm.399042	NM_008991	ENSMUSG00000028127	Abcd3	AI313901|AU018866|AW146054|PMP68|PMP70|Pxmp1	ATP-binding cassette, sub-family D (ALD), member 3	protein-coding
common_peak2-31786-110-193--0.197915081808484-0.6467996112304	chr9	31279520	31281670	+	0	NA	Intergenic	Lx5|LINE|L1	-8772	NM_144936	235135	Mm.390134	NM_144936	ENSMUSG00000041737	Tmem45b	BC018222	transmembrane protein 45b	protein-coding
common_peak1-15856-6-11--1.01956439034085-1.32595962126035	chr5	3688499	3688945	+	0	NA	Intergenic	Intergenic	31718	NM_029154	75010	Mm.85064	NM_029141	ENSMUSG00000014529	Tmbim7	4930403J02Rik|4930500J03Rik|4930511M11Rik|Lgf5|Tmbim1b	transmembrane BAX inhibitor motif containing 7	protein-coding
common_peak1-8544-13-17--0.391452970804544-0.364171515310935	chr10	93309379	93309979	+	0	NA	exon (NM_001206851, exon 3 of 7)	exon (NM_001206851, exon 3 of 7)	15379	NM_001206851	327799	Mm.491598	NM_183199	ENSMUSG00000020020	Usp44	E430004F17Rik	ubiquitin specific peptidase 44	protein-coding
common_peak1-18382-36-26-0.724433584004286-1.41868709588403	chr8	70776451	70777623	+	0	NA	Intergenic	ORR1D2|LTR|MaLR	-23390	NM_028182	72281	Mm.40974	NM_028182	ENSMUSG00000053886	Sh2d4a	2210402M20Rik|SH2A	SH2 domain containing 4A	protein-coding
unique_peak1-3403-8-1-2.00522241794757-2.05605744720049	chr19	4677772	4678408	+	0	NA	intron (NM_001033447, intron 3 of 14)	RMER4A|LTR|ERVK	20578	NM_001033447	381196	Mm.297789	NM_001033447	ENSMUSG00000071691	Gm960	-	predicted gene 960	protein-coding
unique_peak2-39404-3-6--1.22133801201688-1.08602067057793	chr9	33728154	33728484	+	0	NA	Intergenic	Intergenic	-121637	NR_040744	77119	Mm.367930	NR_040744	ENSMUSG00000098758	7630403G23Rik	-	RIKEN cDNA 7630403G23 gene	ncRNA
unique_peak2-33614-8-9--0.316705676939792-1.03275496310833	chr11	95079837	95080275	+	0	NA	Intergenic	B4A|SINE|B4	-42787	NM_053093	93670	Mm.40085	NM_053093	ENSMUSG00000020872	Tac4	AW489379|PPT-C	tachykinin 4	protein-coding
common_peak1-14558-17-15-0.218296338205038-0.403453972741633	chr3	36342838	36343666	+	0	NA	Intergenic	Intergenic	31194	NR_105976	102466786		NR_105976	miRBase:MI0022858	Mir7009	mmu-mir-7009	microRNA mir-7009	ncRNA
common_peak1-9824-11-14--0.398197011356905-0.379391706698377	chr12	71882400	71883155	+	0	NA	Intergenic	Intergenic	-43724	NM_028127	319710	Mm.2962	NM_028127	ENSMUSG00000048285	Frmd6	2610019M19Rik|4930488L10Rik|AW212977	FERM domain containing 6	protein-coding
unique_peak2-36604-6-11--1.01956439034085-1.32595962126035	chr2	178023292	178023779	+	0	NA	intron (NM_001177789, intron 7 of 12)	B4A|SINE|B4	95746	NM_001007154	74189	Mm.44413	NM_028806	ENSMUSG00000027525	Phactr3	1500003N10Rik|4930415A02Rik|H17739|Scapin1|Scapinin|mKIAA4224	phosphatase and actin regulator 3	protein-coding
common_peak2-25636-21-19-0.247561170378873-0.427564438475253	chr19	9106199	9106671	+	0	NA	intron (NR_104460, intron 4 of 6)	PB1D10|SINE|Alu	42661	NM_001286518	66395	Mm.203866	NM_009643	ENSMUSG00000069833	Ahnak	DY6	AHNAK nucleoprotein (desmoyokin)	protein-coding
unique_peak2-32616-9-10--0.269818212233077-1.05503135781948	chr1	106629448	106629830	+	0	NA	Intergenic	Intergenic	-35757	NM_011800	23836	Mm.103640	NM_011800	ENSMUSG00000050840	Cdh20	Cdh7	cadherin 20	protein-coding
common_peak2-24906-77-155--0.500875639306251-1.96843083716487	chr17	84185497	84188479	+	0	NA	intron (NM_054082, intron 11 of 16)	intron (NM_054082, intron 11 of 16)	59142	NM_025325	107766	Mm.30100	NM_025325	ENSMUSG00000000673	Haao	0610007K21Rik|0610012J07Rik|3-HAO|3-HAOxase|3HAO	3-hydroxyanthranilate 3,4-dioxygenase	protein-coding
unique_peak2-34514-7-6--0.00826409175941478-0.97990265578305	chr14	51960030	51960515	+	0	NA	intron (NR_045736, intron 2 of 4)	intron (NR_045736, intron 2 of 4)	4892	NR_045736	75377	Mm.402100	NR_045736		4930597G03Rik	-	RIKEN cDNA 4930597G03 gene	ncRNA
common_peak1-17403-19-21--0.0567442919756109-0.301029995663971	chr7	4658344	4659185	+	0	NA	exon (NM_001003920, exon 14 of 19)	exon (NM_001003920, exon 14 of 19)	16234	NM_001168572	381979	Mm.297064	NM_001003920	ENSMUSG00000035390	Brsk1	Gm1100|SAD-B|SADB	BR serine/threonine kinase 1	protein-coding
common_peak1-9470-9-12--0.510826311736872-0.394412252720706	chr11	104607997	104608511	+	0	NA	Intergenic	Intergenic	138940	NM_016780	16416	Mm.87150	NM_016780	ENSMUSG00000020689	Itgb3	CD61|GP3A|INGRB3	integrin beta 3	protein-coding
unique_peak1-6828-8-3-1.00522241794757-1.39487600375387	chr8	79292826	79293389	+	0	NA	intron (NR_028579, intron 1 of 1)	intron (NR_028579, intron 1 of 1)	130965	NR_028579	100039211	Mm.367571	NR_028579	ENSMUSG00000074235	Gm10649	ENSMUSG00000074235	predicted gene 10649	ncRNA
unique_peak1-5248-7-1-1.79909083029819-1.80617997398389	chr5	53444187	53444581	+	0	NA	intron (NM_011402, intron 1 of 12)	intron (NM_011402, intron 1 of 12)	3792	NM_011402	20531	Mm.284891	NM_011402	ENSMUSG00000029188	Slc34a2	AA536683|D5Ertd227e|NaPi-2b|Npt2b	solute carrier family 34 (sodium phosphate), member 2	protein-coding
unique_peak2-33618-1-7--2.62705701021674-1.80617997398389	chr11	95798595	95798984	+	0	NA	Intergenic	RLTR1B|LTR|ERV1	-22604	NM_008081	14422	Mm.340702	NM_008081		B4galnt2	AI593864|Dlb-1|Dlb1|Galg2|Galgt2|Ggm3|Igf2bp1	beta-1,4-N-acetyl-galactosaminyl transferase 2	protein-coding
unique_peak1-7128-9-1-2.18961340640422-2.31132995230379	chr9	49923272	49923792	+	0	NA	Intergenic	MLT1G3|LTR|MaLR	-316358	NM_010875	17967	Mm.4974	NM_010875		Ncam1	CD56|E-NCAM|NCAM-1|Ncam	neural cell adhesion molecule 1	protein-coding
common_peak2-29155-8-18--1.24270509549601-1.15812782348128	chr5	129715467	129715953	+	0	NA	Intergenic	Intergenic	113085	NM_001081342	243277	Mm.440501	NM_177734	ENSMUSG00000044017	Gpr133	E230012M21Rik	G protein-coupled receptor 133	protein-coding
unique_peak1-4935-9-3-1.18961340640422-1.57096726280955	chr4	63495811	63496284	+	0	NA	intron (NM_009403, intron 3 of 3)	intron (NM_009403, intron 3 of 3)	26271	NM_009403	21949	Mm.4664	NM_009403		Tnfsf8	CD153|CD30LG|Cd30l	tumor necrosis factor (ligand) superfamily, member 8	protein-coding
common_peak2-21373-19-24--0.241168863113038-0.344491671143527	chr11	78411772	78412647	+	0	NA	intron (NM_008702, intron 3 of 10)	intron (NM_008702, intron 3 of 10)	-47972	NM_133706	69071	Mm.29431	NM_133706	ENSMUSG00000037278	Tmem97	1810014L12Rik|AI115531|AL022956|D11Bhm182e	transmembrane protein 97	protein-coding
unique_peak2-34268-2-10--2.37688587490062-2.09384600808989	chr13	67128306	67128682	+	0	NA	intron (NR_045851, intron 1 of 8)	RMER17C|LTR|ERVK	4847	NR_045851	71226	Mm.399574	NR_045851		4933433G19Rik	-	RIKEN cDNA 4933433G19 gene	ncRNA
common_peak1-8807-64-78-0.1616656535315-0.431920820308006	chr11	20830456	20832037	+	0	NA	Intergenic	Intergenic	-100135	NM_173752	216551	Mm.76694	NM_173752	ENSMUSG00000042363	Lgalsl	1110067D22Rik|A530071M23|Grpa|Hspc159|Lgalsla	lectin, galactoside binding-like	protein-coding
unique_peak2-37345-3-8--1.58390809140159-1.39487600375387	chr4	132768358	132768962	+	0	NA	promoter-TSS (NM_008154)	promoter-TSS (NM_008154)	-209	NM_008154	14748	Mm.4721	NM_008154		Gpr3	Gpcr20|Gpcr21|Gpcr3	G-protein coupled receptor 3	protein-coding
common_peak1-8294-24-46--0.761378948909921-1.26138754964088	chr10	33950745	33951554	+	0	NA	Intergenic	Intergenic	-23792	NM_172508	212898	Mm.34557	NM_172508	ENSMUSG00000039497	Dse	6030499O08|AI480506|B130024B19Rik|Sart2	dermatan sulfate epimerase	protein-coding
common_peak2-30879-14-14--0.00767443525087419-0.308519316180257	chr7	141216561	141217257	+	0	NA	intron (NM_007400, intron 3 of 22)	ORR1E|LTR|MaLR	199871	NM_007400	11489	Mm.439714	NM_007400	ENSMUSG00000054555	Adam12	Mltna|mKIAA4001	a disintegrin and metallopeptidase domain 12 (meltrin alpha)	protein-coding
unique_peak1-6007-7-0-2.79909083029819-2.40823996531185	chr6	106765660	106766074	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-15786	NM_175357	58799	Mm.290085	NM_021449		Crbn	2610203G15Rik|2900045O07Rik|AF229032|AW108261|piL	cereblon	protein-coding
unique_peak2-36085-3-6--1.22133801201688-1.08602067057793	chr19	56037376	56037697	+	0	NA	Intergenic	L1MEf|LINE|L1	67725	NM_001142924	21416	Mm.139815	NM_009333	ENSMUSG00000024985	Tcf7l2	TCF4B|TCF4E|Tcf-4|Tcf4|mTcf-4B|mTcf-4E	transcription factor 7 like 2, T cell specific, HMG box	protein-coding
common_peak2-29504-13-6-0.971117108580164-1.01572999746118	chr6	34234660	34235132	+	0	NA	Intergenic	Intergenic	32547	NR_037965	626009	Mm.451	NR_028277		Gm6644	Akr1b3p|EG626009	Akr1b3 pseudogene	pseudo
common_peak2-30667-11-23--1.07626891646954-1.24082643394777	chr7	101904915	101905694	+	0	NA	Intergenic	Intergenic	-1453843	NM_011858	23966	Mm.254610	NM_011858	ENSMUSG00000048078	Tenm4	Doc4|ELM2|Odz4|R75022|Ten-m4|l(7)-3Rn|l7Rn3|mKIAA1302	teneurin transmembrane protein 4	protein-coding
common_peak1-17209-22-9-1.32535601020004-2.00244947055753	chr6	125324511	125325689	+	0	NA	intron (NM_198604, intron 6 of 16)	intron (NM_198604, intron 6 of 16)	5422	NM_198604	213522	Mm.333396	NM_198604	ENSMUSG00000038167	Plekhg6	BC026778|Gm155	pleckstrin homology domain containing, family G (with RhoGef domain) member 6	protein-coding
unique_peak2-37486-3-6--1.22133801201688-1.08602067057793	chr5	5293719	5294007	+	0	NA	intron (NM_011074, intron 2 of 14)	Lx8|LINE|L1	86388	NM_011074	18647	Mm.389061	NM_011074	ENSMUSG00000028926	Cdk14	Pftk1|mKIAA0834	cyclin-dependent kinase 14	protein-coding
common_peak1-11621-58-83--0.0963674878882639-0.322478816481785	chr16	20097270	20098222	+	0	NA	intron (NM_029436, intron 1 of 7)	CpG	119	NM_029436	75785	Mm.392450	NM_029436	ENSMUSG00000062901	Klhl24	1110046J11Rik|4930429H24Rik|6530402O20Rik|C85082	kelch-like 24	protein-coding
common_peak1-7462-65-101--0.180259402494368-0.438670624754528	chr1	133660518	133661722	+	0	NA	intron (NM_177243, intron 17 of 20)	intron (NM_177243, intron 17 of 20)	20521	NM_177243	320718	Mm.482704	NM_177243	ENSMUSG00000042268	Slc26a9	E030002L01Rik	solute carrier family 26, member 9	protein-coding
unique_peak2-33298-6-8--0.60452689106201-1.03789460276074	chr11	3408212	3408653	+	0	NA	Intergenic	Intergenic	-3608	NM_172439	170835	Mm.24313	NM_172439	ENSMUSG00000034570	Inpp5j	Pib5pa|Pipp	inositol polyphosphate 5-phosphatase J	protein-coding
common_peak2-23403-29-59--0.794600514993408-1.64648158885269	chr15	59373780	59374747	+	0	NA	intron (NM_026746, intron 4 of 6)	intron (NM_026746, intron 4 of 6)	-105946	NM_144549	211770	Mm.40298	NM_144549	ENSMUSG00000032501	Trib1	A530090O15Rik|TRB-1|Trb1	tribbles homolog 1 (Drosophila)	protein-coding
common_peak1-13437-39-18-1.36783373347557-3.53754093745204	chr19	55422775	55424109	+	0	NA	intron (NM_016862, intron 3 of 7)	intron (NM_016862, intron 3 of 7)	32895	NM_001293686	53611	Mm.258637	NM_016862	ENSMUSG00000024983	Vti1a	1110014F16Rik|1110018K19Rik|4921537J05Rik|MVti1|MVti1a|Vti1|Vti1-rp2	vesicle transport through interaction with t-SNAREs 1A	protein-coding
common_peak2-20276-27-48--0.623163893219973-1.00060938969219	chr1	191182468	191183371	+	0	NA	intron (NM_001281848, intron 1 of 5)	intron (NM_001281848, intron 1 of 5)	-14848	NM_001281847	16526	Mm.33304	NM_010607	ENSMUSG00000037624	Kcnk2	A430027H14Rik|AI848635|TREK-1	potassium channel, subfamily K, member 2	protein-coding
common_peak1-19393-12-15--0.351224014912361-0.332077462497413	chrX	48284893	48285441	+	0	NA	intron (NM_001190332, intron 1 of 11)	intron (NM_001190332, intron 1 of 11)	10720	NM_001190332	385354	Mm.393050	NM_001190332		Frmd7	EG665849|Gm1533	FERM domain containing 7	protein-coding
common_peak1-14664-7-10--0.660340788339108-1.12966497611638	chr3	58636591	58637084	+	0	NA	Intergenic	Intergenic	52297	NM_153386	229320	Mm.131502	NM_153384	ENSMUSG00000043850	Clrn1	A130002D11Rik|USH3|Ush3a	clarin 1	protein-coding
common_peak1-8830-19-41--0.989630096117074-1.72734829286054	chr11	23497437	23498034	+	0	NA	intron (NM_027860, intron 12 of 21)	intron (NM_027860, intron 12 of 21)	35896	NM_027860	71675	Mm.48031	NM_027860	ENSMUSG00000042208	0610010F05Rik	Kiaa1841|mKIAA1841	RIKEN cDNA 0610010F05 gene	protein-coding
common_peak2-30200-96-139-0.0367681974103622-0.320213612231709	chr7	59228037	59229819	+	0	NA	intron (NM_008087, intron 7 of 7)	intron (NM_008087, intron 7 of 7)	32156	NR_027704	75744	Mm.386823	NM_001160345	ENSMUSG00000074093	Svip	1700006C13Rik|6620401M08Rik	small VCP/p97-interacting protein	protein-coding
common_peak1-12983-79-61-0.874638856789745-3.84189370477377	chr19	4134529	4137155	+	0	NA	3' UTR (NM_144532, exon 6 of 6)	3' UTR (NM_144532, exon 6 of 6)	3767	NM_144532	73660	Mm.379226	NM_144532	ENSMUSG00000024842	Cabp4	2410038D05Rik	calcium binding protein 4	protein-coding
common_peak1-8005-11-14--0.398197011356905-0.379391706698377	chr1	166041047	166041593	+	0	NA	Intergenic	L1MA8|LINE|L1	-4075	NM_011347	20344	Mm.3337	NM_011347	ENSMUSG00000026580	Selp	CD62P|GMP-140|Grmp|LECAM3|PADGEM	selectin, platelet	protein-coding
common_peak2-19777-14-13-0.0918612383000403-0.332077462497413	chr1	82815853	82816470	+	0	NA	Intergenic	Intergenic	-19897	NM_010472	15463	Mm.392569	NM_010472	ENSMUSG00000026159	Agfg1	AU045498|C130049H11Rik|C85612|D730048C23Rik|Hrb|RAB|Rip	ArfGAP with FG repeats 1	protein-coding
unique_peak1-6058-7-2-1.21412832957703-1.45399745587252	chr6	115906390	115906886	+	0	NA	exon (NM_026376, exon 34 of 36)	exon (NM_026376, exon 34 of 36)	11681	NM_138311	171506	Mm.21899	NM_138311	ENSMUSG00000042279	H1foo	C86609|H1fo|H1oo	H1 histone family, member O, oocyte-specific	protein-coding
common_peak1-15950-11-10-0.0492619656143161-0.31137425193576	chr5	30231942	30232581	+	0	NA	intron (NR_105781, intron 1 of 2)	ORR1A1-int|LTR|MaLR	-107440	NM_031168	16193	Mm.1019	NM_031168	ENSMUSG00000025746	Il6	Il-6	interleukin 6	protein-coding
common_peak2-22821-33-50--0.341087779445966-0.542803625802499	chr14	18331032	18332094	+	0	NA	Intergenic	L1_Mur2|LINE|L1	-161911	NM_001113417	21834	Mm.32563	NM_009380	ENSMUSG00000021779	Thrb	Nr1a2|T3R[b]|T3Rbeta|Thrb1|Thrb2|c-erbAbeta	thyroid hormone receptor beta	protein-coding
common_peak2-29415-25-25-0.161410187204014-0.36542888694933	chr6	3497898	3499028	+	0	NA	intron (NM_024260, intron 13 of 27)	ORR1C2-int|LTR|MaLR	50070	NM_001167750	73288	Mm.45539	NM_024260	ENSMUSG00000001376	Ccdc132	1700034M03Rik|8430415E05Rik|BLM|C87205|mKIAA1861	coiled-coil domain containing 132	protein-coding
common_peak2-27115-20-25--0.212364933549899-0.342639663781856	chr3	14533715	14534577	+	0	NA	intron (NM_028915, intron 1 of 18)	intron (NM_028915, intron 1 of 18)	358	NM_028915	71710	Mm.257449	NM_028915	ENSMUSG00000027550	Lrrcc1	1200008A14Rik|4932441F23Rik|AI195358|AI447421	leucine rich repeat and coiled-coil domain containing 1	protein-coding
unique_peak1-5593-10-1-2.35641534500877-2.57096726280955	chr6	22380052	22380686	+	0	NA	Intergenic	L1M2|LINE|L1	-74288	NM_138587	27999	Mm.490307	NM_138587	ENSMUSG00000029672	Fam3c	D6Wsu176e|Ilei	family with sequence similarity 3, member C	protein-coding
common_peak1-12650-11-8-0.338768582809301-1.14218153353838	chr18	35739650	35740348	+	0	NA	intron (NM_010771, intron 6 of 14)	intron (NM_010771, intron 6 of 14)	18187	NM_010771	17184	Mm.215034	NM_010771	ENSMUSG00000037236	Matr3	1110061A14Rik|2810017I02Rik|AI841759|AW555618|D030046F20Rik|mKIAA0723	matrin 3	protein-coding
common_peak1-8069-24-40--0.564342101850367-0.763288167491253	chr1	177442340	177443351	+	0	NA	Intergenic	Intergenic	-20169	NM_001199003	24012	Mm.7956	NM_011880		Rgs7	-	regulator of G protein signaling 7	protein-coding
unique_peak2-40013-1-7--2.62705701021674-1.80617997398389	chrY	77488141	77488571	+	0	NA	Intergenic	Intergenic	75101098	NM_001270512	100041505	Mm.491824	NM_001270512		Gm3376	Rbmy1b	predicted gene 3376	protein-coding
unique_peak1-5223-8-0-3.00522241794757-2.70926996097583	chr5	38038322	38038798	+	0	NA	intron (NM_022416, intron 2 of 11)	intron (NM_022416, intron 2 of 11)	69832	NM_022416	64293	Mm.103714	NM_022416	ENSMUSG00000029123	Stk32b	2510009F08Rik|STKG6|Stk32|YANK2	serine/threonine kinase 32B	protein-coding
unique_peak1-631-8-2-1.42025991722641-1.65811743852845	chr10	31467739	31468306	+	0	NA	intron (NM_001013411, intron 4 of 6)	RMER5|LTR|ERV1	-138491	NM_001146349	268291	Mm.295212	NM_001146349	ENSMUSG00000063760	Rnf217	AU016819|Ibrdc1	ring finger protein 217	protein-coding
common_peak2-23476-6-6--0.241956811677302-0.947717972411649	chr15	73511599	73512065	+	0	NA	Intergenic	Intergenic	26103	NM_173365	239530	Mm.122997	NM_173365	ENSMUSG00000045281	Gpr20	A430106B11Rik	G protein-coupled receptor 20	protein-coding
common_peak2-20950-6-8--0.60452689106201-1.03789460276074	chr11	12463987	12464431	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-99246	NM_001282993	12808	Mm.22847	NM_172496	ENSMUSG00000020173	Cobl	-	cordon-bleu WH2 repeat	protein-coding
common_peak1-18242-6-1-1.5653981103803-1.56314192529759	chr8	32286828	32287162	+	0	NA	Intergenic	RLTRETN_Mm|LTR|ERVK	-7799	NM_026453	67920	Mm.289818	NM_026453	ENSMUSG00000031578	Mak16	2600016B03Rik|AI314911|Rbm13	MAK16 homolog (S. cerevisiae)	protein-coding
common_peak1-14980-43-71--0.387361815918609-0.743411445750435	chr3	107333199	107334564	+	0	NA	Intergenic	Intergenic	-12945	NM_172271	229706	Mm.212867	NM_172271	ENSMUSG00000027894	Slc6a17	D130012J15Rik|Ntt4	solute carrier family 6 (neurotransmitter transporter), member 17	protein-coding
common_peak2-23137-10-14--0.550475250599749-0.446472590016315	chr14	103070059	103070629	+	0	NA	Intergenic	RLTR31_Mur|LTR|ERVK	311505	NR_039592	100628599		NR_039592	miRBase:MI0018042	Mir5130	mmu-mir-5130|mu-mir-5130	microRNA 5130	ncRNA
common_peak2-30271-15-18--0.235762762887929-0.326591483156968	chr7	16272777	16273525	+	0	NA	Intergenic	L1_Mus2|LINE|L1	-48025	NM_145707	246791	Mm.425362	NM_145707	ENSMUSG00000066772	Obox3	Ohx	oocyte specific homeobox 3	protein-coding
unique_peak1-2713-13-3-1.77847203063777-2.58603100924543	chr16	91963881	91964420	+	0	NA	Intergenic	RMER15|LTR|ERVL	-32275	NM_138597	28080	Mm.41	NM_138597	ENSMUSG00000022956	Atp5o	ATPO|D12Wsu28e|OSCP	ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	protein-coding
unique_peak2-39018-4-8--1.19338551529556-1.21878474469819	chr8	57497841	57498293	+	0	NA	Intergenic	Intergenic	887694	NM_175939	244486	Mm.67684	NM_175939	ENSMUSG00000046258	Adam29	-	a disintegrin and metallopeptidase domain 29	protein-coding
common_peak2-30286-10-13--0.450939577048835-0.386243247519795	chr7	19076114	19076748	+	0	NA	Intergenic	L1Md_T|LINE|L1	-6933	NM_001029893	574429	Mm.296754	NM_001029893	ENSMUSG00000070799	Psg26	EG574429|cea14	pregnancy-specific glycoprotein 26	protein-coding
unique_peak2-33540-8-14--0.901668177660948-0.660903317613906	chr11	78175116	78175560	+	0	NA	intron (NM_008238, intron 6 of 8)	(GTTTG)n|Simple_repeat|Simple_repeat	18314	NM_011676	22248	Mm.284811	NM_011676	ENSMUSG00000002058	Unc119	D11Bhm52|HRG4|MRG4|Rg4|Rtg4|Unc119h	unc-119 homolog (C. elegans)	protein-coding
common_peak1-14286-20-23--0.0968877161299631-0.305855887145851	chr2	157447653	157448535	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-55997	NM_016916	53619	Mm.480461	NM_016916	ENSMUSG00000067787	Blcap	AI462828|Bc10	bladder cancer associated protein homolog (human)	protein-coding
common_peak1-11215-152-185-0.424458179581813-2.41802325679537	chr15	79027418	79029420	+	0	NA	intron (NR_029470, intron 2 of 4)	intron (NR_029470, intron 2 of 4)	-31184	NM_008837	18693	Mm.259464	NM_008837	ENSMUSG00000068206	Pick1	Prkcabp	protein interacting with C kinase 1	protein-coding
unique_peak1-2779-8-3-1.00522241794757-1.39487600375387	chr17	7984944	7985514	+	0	NA	intron (NM_001081416, intron 1 of 19)	intron (NM_001081416, intron 1 of 19)	12610	NM_001081416	68655	Mm.379161	NM_001081416	ENSMUSG00000071984	Fndc1	1110027O12Rik|1110051A18Rik|mKIAA1866	fibronectin type III domain containing 1	protein-coding
common_peak2-31824-7-6--0.00826409175941478-0.97990265578305	chr9	44234415	44234772	+	0	NA	Intergenic	MERVL_2A-int|LTR|ERVL	-8503	NM_201372	382073	Mm.259573	NM_201372	ENSMUSG00000043923	Ccdc84	D630044F24Rik|Gm1114	coiled-coil domain containing 84	protein-coding
unique_peak1-1794-10-2-1.77145284428761-2.09384600808989	chr14	24230178	24230723	+	0	NA	intron (NM_001253371, intron 18 of 29)	L1Md_T|LINE|L1	-316657	NR_033550	791307	Mm.364384	NR_033550	ENSMUSG00000068680	Gm10248	ENSMUSG00000068680	predicted gene 10248	ncRNA
common_peak2-24517-5-9--1.02630843089322-1.21398586181642	chr17	26610198	26610623	+	0	NA	Intergenic	Intergenic	35007	NM_013642	19252	Mm.239041	NM_013642	ENSMUSG00000024190	Dusp1	3CH134|MKP1|Ptpn16|U19515|erp|mkp-1	dual specificity phosphatase 1	protein-coding
unique_peak1-1475-10-5-0.771452844287613-1.33892459842472	chr12	111936203	111936827	+	0	NA	Intergenic	Intergenic	-1910	NM_010480	15519	Mm.1843	NM_010480	ENSMUSG00000021270	Hsp90aa1	86kDa|89kDa|AL024080|AL024147|Hsp86-1|Hsp89|Hsp90|Hspca|hsp4	heat shock protein 90, alpha (cytosolic), class A member 1	protein-coding
common_peak1-13489-99-104-0.505112225616529-2.04834832167125	chr2	30898638	30902965	+	0	NA	intron (NM_001177648, intron 10 of 16)	intron (NM_001177648, intron 10 of 16)	51219	NM_001177650	14269	Mm.52297	NM_019406	ENSMUSG00000075415	Fnbp1	1110057E06Rik|2210010H06Rik|FBP1|Fbp17	formin binding protein 1	protein-coding
unique_peak1-993-14-3-1.89921616035764-2.80787975886178	chr11	69686559	69687225	+	0	NA	Intergenic	ID_B1|SINE|B4	4628	NM_001195710	100503361	Mm.340490	NM_001195710	ENSMUSG00000094845	Tmem95	432576	transmembrane protein 95	protein-coding
common_peak2-28054-19-17-0.232762325219374-0.392630012299441	chr4	59318536	59319293	+	0	NA	Intergenic	L1Md_T|LINE|L1	45991	NR_105031	101055769	Mm.421401	NR_105031		LOC101055769	-	uncharacterized LOC101055769	ncRNA
common_peak2-27445-12-20--0.743541437691122-0.625923329873571	chr3	90052922	90053515	+	0	NA	intron (NM_013901, intron 2 of 3)	intron (NM_013901, intron 2 of 3)	1104	NM_013901	30791	Mm.294709	NM_013901	ENSMUSG00000052310	Slc39a1	Zip1|Zirtl	solute carrier family 39 (zinc transporter), member 1	protein-coding
common_peak1-16892-11-8-0.338768582809301-1.14218153353838	chr6	71990821	71991238	+	0	NA	intron (NR_046180, intron 1 of 2)	ORR1C2|LTR|MaLR	1493	NR_046180	330350	Mm.246787	NR_046180		9130221F21Rik	9130221F21	RIKEN cDNA 9130221F21 gene	ncRNA
unique_peak1-7335-9-2-1.60465090568306-1.87199725847353	chr9	124067697	124068256	+	0	NA	Intergenic	L1_Mm|LINE|L1	31694	NM_009917	12774	Mm.14302	NM_009917	ENSMUSG00000079227	Ccr5	AM4-7|CD195|Cmkbr5	chemokine (C-C motif) receptor 5	protein-coding
common_peak2-21397-11-18--0.739233929191972-0.671582559449692	chr11	80779262	80779947	+	0	NA	intron (NM_001034013, intron 2 of 9)	intron (NM_001034013, intron 2 of 9)	107713	NM_029367	75622	Mm.26988	NM_029367	ENSMUSG00000053184	Spaca3	1700025M08Rik|ALLP17|Lyc3|SLLP1|mSLLP1	sperm acrosome associated 3	protein-coding
unique_peak2-35714-5-10--1.16381195464315-1.33892459842472	chr18	33907643	33908240	+	0	NA	Intergenic	MTD|LTR|MaLR	-46605	NR_038152	69749	Mm.248787	NR_038151	ENSMUSG00000087590	2410004N09Rik	-	RIKEN cDNA 2410004N09 gene	ncRNA
common_peak2-32123-21-37--0.67843824817735-0.907273387067392	chr9	105053139	105053845	+	0	NA	Intergenic	L1Md_F3|LINE|L1	-6080	NM_028562	73532	Mm.23516	NM_028562	ENSMUSG00000032566	1700080E11Rik	AI429110|Tseg8	RIKEN cDNA 1700080E11 gene	protein-coding
common_peak1-15571-7-14--1.10779976531033-0.817533494790411	chr4	126429687	126430151	+	0	NA	promoter-TSS (NM_001035525)	promoter-TSS (NM_001035525)	754	NM_011986	26562	Mm.206206	NM_011986	ENSMUSG00000028833	Ncdn	AU042419|MMS10-AE|Ms10ae|mKIAA0607|norbin	neurochondrin	protein-coding
common_peak1-18049-11-11--0.0762689164695427-0.301029995663976	chr7	144939019	144939750	+	0	NA	Intergenic	Intergenic	310027	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
common_peak1-9329-50-67--0.0465225247713867-0.302662697069732	chr11	95309624	95310762	+	0	NA	intron (NM_025287, intron 2 of 10)	intron (NM_025287, intron 2 of 10)	34796	NM_025287	20747	Mm.285454	NM_025287	ENSMUSG00000057522	Spop	AI315626|Pcif1|TEF2	speckle-type POZ protein	protein-coding
unique_peak2-38809-2-5--1.50241675698448-1.08602067057793	chr7	133793416	133793701	+	0	NA	intron (NM_029339, intron 1 of 9)	L2|LINE|L2	735	NM_029339	75565	Mm.45686	NM_029339	ENSMUSG00000030714	Ccdc101	1700023O11Rik|9530025I05Rik	coiled-coil domain containing 101	protein-coding
unique_peak2-36836-1-8--2.79698201165906-2.05605744720049	chr3	88623742	88624040	+	0	NA	intron (NR_028359, intron 14 of 17)	intron (NR_028359, intron 14 of 17)	12518	NR_015498	319830	Mm.400394	NR_015498		1500004A13Rik	5430404N14Rik|BB132176	RIKEN cDNA 1500004A13 gene	ncRNA
common_peak2-20762-23-31--0.278232495490919-0.396392531282608	chr10	116192455	116193090	+	0	NA	Intergenic	Intergenic	-26539	NR_045345	72286	Mm.396207	NR_045345		1700030O20Rik	-	RIKEN cDNA 1700030O20 gene	ncRNA
common_peak1-7804-17-28--0.639684656922534-0.677583764578261	chr1	118389625	118390409	+	0	NA	intron (NM_001077425, intron 19 of 23)	L1Md_T|LINE|L1	808303	NM_001077425	636808	Mm.101576	NM_001077425	ENSMUSG00000070695	Cntnap5a	Caspr5-1|EG636808	contactin associated protein-like 5A	protein-coding
common_peak2-31943-47-39-0.612913329879185-1.36066917175235	chr9	64172378	64173538	+	0	NA	intron (NM_001001295, intron 5 of 16)	intron (NM_001001295, intron 5 of 16)	15306	NM_172519	213550	Mm.268341	NM_172519	ENSMUSG00000032396	Dis3l	AV340375	DIS3 mitotic control homolog (S. cerevisiae)-like	protein-coding
unique_peak1-3191-9-3-1.18961340640422-1.57096726280955	chr18	53247344	53247695	+	0	NA	Intergenic	Intergenic	-88500	NM_026386	67804	Mm.252171	NM_026386	ENSMUSG00000034484	Snx2	0610030A03Rik	sorting nexin 2	protein-coding
common_peak2-25630-44-36-0.612439468939585-1.33966217785261	chr19	9079000	9080516	+	0	NA	exon (NM_009643, exon 5 of 5)	exon (NM_009643, exon 5 of 5)	15984	NM_001286518	66395	Mm.203866	NM_009643	ENSMUSG00000069833	Ahnak	DY6	AHNAK nucleoprotein (desmoyokin)	protein-coding
unique_peak2-33195-4-11--1.6084230145744-1.68134727924692	chr10	110744793	110745206	+	0	NA	Intergenic	Intergenic	9264	NM_027914	71769	Mm.45256	NM_027914	ENSMUSG00000035759	Bbs10	1300007O09Rik|AI452285	Bardet-Biedl syndrome 10 (human)	protein-coding
unique_peak2-36832-11-23--1.07626891646954-1.24082643394777	chr3	88579371	88580168	+	0	NA	Intergenic	Intergenic	-1210	NR_028359	100302730	Mm.482358	NR_028359		5830417I10Rik	3632445O20Rik|AA387005	gon-4-like pseudogene	pseudo
common_peak1-7527-19-26--0.352200175501782-0.416752705545949	chr1	33719777	33720699	+	0	NA	intron (NM_008922, intron 4 of 13)	intron (NM_008922, intron 4 of 13)	6401	NM_008922	19076	Mm.27705	NM_008922	ENSMUSG00000026134	Prim2	AI323589	DNA primase, p58 subunit	protein-coding
common_peak1-12052-27-53--0.763341551268232-1.43939133646632	chr17	22225103	22225755	+	0	NA	Intergenic	L1_Mur3|LINE|L1	77515	NM_177596	210853	Mm.441622	NM_177596	ENSMUSG00000063383	Zfp947	6720451E15|EG210853|Gm4769	zinc finger protein 947	protein-coding
common_peak2-29908-26-24-0.284042902383738-0.446094173747083	chr6	114642917	114643889	+	0	NA	intron (NM_001253718, intron 8 of 19)	MTD|LTR|MaLR	50284	NM_001253717	74244	Mm.275332	NM_028835	ENSMUSG00000030314	Atg7	1810013K23Rik|Agp7|Apg7l|Atg7l|Gm21553	autophagy related 7	protein-coding
common_peak1-7806-19-27--0.404667595395917-0.464317215211849	chr1	119503585	119504624	+	0	NA	Intergenic	L1_Mus1|LINE|L1	703605	NM_011650	22099	Mm.426637	NM_011650	ENSMUSG00000026374	Tsn	2610034C24Rik|AU040286|C3PO|TB-RBP	translin	protein-coding
common_peak2-27294-14-39--1.42271193452972-2.70027529094734	chr3	59204018	59204722	+	0	NA	Intergenic	L1Md_T|LINE|L1	-56192	NM_001162884	242050	Mm.228086	NM_001162884	ENSMUSG00000036334	Igsf10	6530405F15Rik|9030224D03|AA409708|AA536958|AI414626|Adlican2|CMF608	immunoglobulin superfamily, member 10	protein-coding
common_peak1-12920-94-67-1.04212672659898-6.01331436443481	chr19	40894023	40895763	+	0	NA	Intergenic	Lx3C|LINE|L1	-10876	NM_172839	240665	Mm.309	NM_172839	ENSMUSG00000025010	Ccnj	D430039C20Rik	cyclin J	protein-coding
common_peak2-23280-27-30-0.0373496405083609-0.315041925765932	chr15	27629968	27631192	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-19283	NM_001242423	223433	Mm.266485	NM_198301	ENSMUSG00000056069	Fam105a	9830126M18	family with sequence similarity 105, member A	protein-coding
common_peak2-21111-7-6--0.00826409175941478-0.97990265578305	chr11	52341363	52341599	+	0	NA	Intergenic	Intergenic	131551	NM_153117	213673	Mm.291979	NM_153117	ENSMUSG00000036275	9530068E07Rik	C85061|Kct2	RIKEN cDNA 9530068E07 gene	protein-coding
common_peak2-26579-15-24--0.631691439219068-0.650819692678081	chr2	104849086	104850074	+	0	NA	intron (NM_145380, intron 5 of 10)	intron (NM_145380, intron 5 of 10)	7604	NM_145380	98221	Mm.379278	NM_145380	ENSMUSG00000027170	Eif3m	Ga17|Pcid1|Tango7	eukaryotic translation initiation factor 3, subunit M	protein-coding
common_peak2-24215-8-10--0.454209200689727-1.078512453669	chr16	78265300	78265699	+	0	NA	Intergenic	Intergenic	-9800	NR_045698	100503619	Mm.387531	NR_045698		E330011O21Rik	-	RIKEN cDNA E330011O21 gene	ncRNA
unique_peak2-34149-2-6--1.72480917832092-1.26211192963361	chr13	24519569	24520008	+	0	NA	intron (NM_001284520, intron 4 of 14)	intron (NM_001284520, intron 4 of 14)	12797	NM_001284520	12763	Mm.8396	NM_007717	ENSMUSG00000016756	Cmah	-	cytidine monophospho-N-acetylneuraminic acid hydroxylase	protein-coding
common_peak2-24040-11-12--0.191746133889479-0.310474156842889	chr16	24495251	24496093	+	0	NA	intron (NM_001145952, intron 2 of 11)	intron (NM_001145952, intron 2 of 11)	-33728	NR_038091	624582	Mm.439775	NR_038091		A730098P11Rik	-	mortality factor 4 like 1 pseudogene	pseudo
common_peak1-15320-8-7-0.00522241794757061-1.00793137938329	chr4	45948972	45949577	+	0	NA	intron (NM_198660, intron 30 of 37)	intron (NM_198660, intron 30 of 37)	-28933	NM_001290475	100121	Mm.275413	NM_146142	ENSMUSG00000035517	Tdrd7	5730495N10Rik|AI447470|PCTAIRE2BP	tudor domain containing 7	protein-coding
common_peak2-31317-15-11-0.4272022498345-0.503257505534083	chr8	79295346	79295853	+	0	NA	intron (NR_028579, intron 1 of 1)	intron (NR_028579, intron 1 of 1)	128473	NR_028579	100039211	Mm.367571	NR_028579	ENSMUSG00000074235	Gm10649	ENSMUSG00000074235	predicted gene 10649	ncRNA
unique_peak1-6891-16-8-0.948338640825749-1.02063122982878	chr8	94778380	94779261	+	0	NA	Intergenic	MTD|LTR|MaLR	101199	NR_110452	71296	Mm.86664	NR_033641	ENSMUSG00000031736	Crnde	4933436C20Rik	colorectal neoplasia differentially expressed (non-protein coding)	ncRNA
common_peak2-30065-59-56-0.492473986707837-1.22554633931855	chr6	128838185	128839175	+	0	NA	intron (NM_001289706, intron 2 of 6)	intron (NM_001289706, intron 2 of 6)	1075	NM_020257	93675	Mm.391513	NM_020257	ENSMUSG00000030365	Clec2i	Clr-g|Clrg|Dcl1|LCL-1|OCILrP2	C-type lectin domain family 2, member i	protein-coding
unique_peak1-2211-10-0-3.35641534500877-3.31132995230379	chr15	72952019	72952508	+	0	NA	intron (NM_153178, intron 11 of 18)	B1_Mus1|SINE|Alu	31421	NM_053068	93696	Mm.23095	NM_053068	ENSMUSG00000068391	Chrac1	2410152E03Rik|2810406L04Rik|YCL1	chromatin accessibility complex 1	protein-coding
common_peak1-9727-26-32--0.116495027199991-0.315041925765944	chr12	33429481	33430267	+	0	NA	Intergenic	Lx5|LINE|L1	-75326	NM_021524	59027	Mm.202727	NM_021524	ENSMUSG00000020572	Nampt	1110035O14Rik|AI314458|AI480535|NAmPRTase|Pbef|Pbef1|Visfatin	nicotinamide phosphoribosyltransferase	protein-coding
common_peak2-25776-30-40--0.187876595126211-0.346766333527252	chr19	32711633	32712574	+	0	NA	intron (NM_001201470, intron 3 of 11)	intron (NM_001201470, intron 3 of 11)	17608	NM_011864	23972	Mm.203916	NM_011864	ENSMUSG00000024899	Papss2	1810018P12Rik|AI159688|AtpsU2|Atpsk2|Sk2|bm	3'-phosphoadenosine 5'-phosphosulfate synthase 2	protein-coding
unique_peak1-6400-9-2-1.60465090568306-1.87199725847353	chr7	80246383	80246818	+	0	NA	non-coding (NR_046024, exon 1 of 3)	non-coding (NR_046024, exon 1 of 3)	354	NR_046024	625243	Mm.261798	NR_046024		Gm6567	-	predicted gene 6567	ncRNA
unique_peak1-3826-8-6-0.197867495889966-1.03789460276074	chr2	153255836	153256324	+	0	NA	intron (NM_001001986, intron 2 of 7)	intron (NM_001001986, intron 2 of 7)	14135	NM_001001986	329540	Mm.50600	NM_001001986	ENSMUSG00000061411	Nol4l	4931410H15|8430427H17Rik|AI429157|Gm1636	nucleolar protein 4-like	protein-coding
unique_peak2-39690-11-18--0.739233929191972-0.671582559449692	chr9	110652136	110653015	+	0	NA	Intergenic	Intergenic	-2926	NM_011199	19228	Mm.3542	NM_011199	ENSMUSG00000032492	Pth1r	PPR|Pthr|Pthr1	parathyroid hormone 1 receptor	protein-coding
common_peak2-25184-10-6-0.549060422951165-1.21398586181642	chr18	57059364	57059864	+	0	NA	intron (NM_177115, intron 1 of 4)	intron (NM_177115, intron 1 of 4)	25588	NM_177115	320253	Mm.312623	NM_177115	ENSMUSG00000032656	March3	6330411I15Rik|A530081L18Rik|AI843639|MARCH-III	membrane-associated ring finger (C3HC4) 3	protein-coding
common_peak2-29320-12-11-0.0638134843664826-0.337263207250336	chr5	146701765	146702281	+	0	NA	Intergenic	L1Md_A|LINE|L1	-10593	NM_007818	13112	Mm.332844	NM_007818	ENSMUSG00000056035	Cyp3a11	AI256190|Cyp3a|IIIAm1|Pcn	cytochrome P450, family 3, subfamily a, polypeptide 11	protein-coding
common_peak2-22718-36-38-0.193918867305506-0.429377759889511	chr13	104015355	104016824	+	0	NA	intron (NM_175171, intron 1 of 28)	intron (NM_175171, intron 1 of 28)	108483	NM_175171	328329	Mm.202606	NM_175171	ENSMUSG00000034751	Mast4	4930420O11Rik|AI642422|mKIAA0303	microtubule associated serine/threonine kinase family member 4	protein-coding
unique_peak2-33641-12-32--1.39561813427081-2.09887956687855	chr11	98774157	98775264	+	0	NA	intron (NM_001025779, intron 6 of 11)	B1_Mus2|SINE|Alu	5245	NM_011799	23834	Mm.20912	NM_011799	ENSMUSG00000017499	Cdc6	CDC18L	cell division cycle 6	protein-coding
common_peak1-16887-147-162-0.556740772451611-3.60834527931913	chr6	71543271	71544994	+	0	NA	intron (NM_173001, intron 20 of 25)	intron (NM_173001, intron 20 of 25)	38548	NM_173001	104263	Mm.260479	NM_173001	ENSMUSG00000053470	Kdm3a	1700105C21Rik|C230043E16Rik|JHDM2a|Jmjd1|Jmjd1a|KDM2A|TGSA|Tsga	lysine (K)-specific demethylase 3A	protein-coding
common_peak1-11436-159-206-0.348422129934764-1.85921881762894	chr15	100226594	100228863	+	0	NA	intron (NM_001146161, intron 15 of 15)	ORR1A2|LTR|MaLR	25758	NM_001146161	18174	Mm.234608	NM_008732	ENSMUSG00000023030	Slc11a2	DCT1|DMT1|Nramp2|mk|van	solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2	protein-coding
unique_peak1-2826-18-7-1.31291915122835-1.71830443967823	chr17	27042702	27043638	+	0	NA	Intergenic	RLTR1B|LTR|ERV1	-10866	NM_053173	16580	Mm.491138	NM_016761	ENSMUSG00000024301	Kifc5b	Hset|KNSL2|Kifc5a	kinesin family member C5B	protein-coding
common_peak1-18034-8-10--0.454209200689727-1.078512453669	chr7	143548126	143548561	+	0	NA	Intergenic	Intergenic	-7245	NR_040459	330664	Mm.127762	NR_040459		C230079O03Rik	C230079O03	RIKEN cDNA C230079O03 gene	ncRNA
unique_peak1-2956-12-3-1.64877598508764-2.36932189928148	chr17	71102577	71103288	+	0	NA	intron (NM_001128181, intron 5 of 9)	intron (NM_001128181, intron 5 of 9)	93185	NM_001164077	21815	Mm.101034	NM_009372	ENSMUSG00000047407	Tgif1	AA959811|AI462167|Tgif	TGFB-induced factor homeobox 1	protein-coding
unique_peak2-38514-9-11--0.395349094316936-0.344532117358383	chr7	44997663	44998158	+	0	NA	Intergenic	Intergenic	1521994	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak1-4977-10-0-3.35641534500877-3.31132995230379	chr4	108484141	108484490	+	0	NA	Intergenic	Intergenic	21874	NM_027453	70533	Mm.379178	NM_027453	ENSMUSG00000028568	Btf3l4	4632412E09Rik|5730434I03Rik|AI316863|AU022207|AW552446	basic transcription factor 3-like 4	protein-coding
unique_peak1-1500-13-0-3.77847203063777-4.51544993495972	chr13	3299393	3299686	+	0	NA	Intergenic	Intergenic	150818	NR_001581	73266	Mm.335891	NR_001581		Speer6-ps1	1700039A02Rik|SPEER-6	spermatogenesis associated glutamate (E)-rich protein 6, pseudogene 1	pseudo
unique_peak2-34166-6-4-0.24347001549294-0.989110657569874	chr13	31567871	31568295	+	0	NA	Intergenic	(TAAA)n|Simple_repeat|Simple_repeat	-81956	NM_008239	15220	Mm.44235	NM_008239	ENSMUSG00000038415	Foxq1	HFH-1|Hfh1|Hfh1l|sa	forkhead box Q1	protein-coding
unique_peak1-3604-9-2-1.60465090568306-1.87199725847353	chr19	32313917	32314411	+	0	NA	intron (NM_144792, intron 4 of 9)	intron (NM_144792, intron 4 of 9)	-28661	NM_001168526	208449	Mm.329810	NM_144792	ENSMUSG00000040451	Sgms1	9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23	sphingomyelin synthase 1	protein-coding
common_peak2-29074-21-32--0.474904854092218-0.550049347815239	chr5	118448584	118449362	+	0	NA	intron (NM_145564, intron 9 of 11)	intron (NM_145564, intron 9 of 11)	22194	NM_145564	231670	Mm.21912	NM_145564	ENSMUSG00000032898	Fbxo21	2810425J22Rik|AU016673|mKIAA0875	F-box protein 21	protein-coding
common_peak1-14380-11-7-0.508693584251613-1.21681515183528	chr2	168104211	168104717	+	0	NA	Intergenic	Intergenic	-9633	NM_001081134	241794	Mm.425102	NM_001081134	ENSMUSG00000074575	Kcng1	AW536275|OTTMUSG00000016048	potassium voltage-gated channel, subfamily G, member 1	protein-coding
unique_peak1-1245-9-0-3.18961340640422-3.01029995663981	chr11	114960329	114960861	+	0	NA	intron (NM_001163753, intron 1 of 8)	intron (NM_001163753, intron 1 of 8)	7850	NM_001163753	58222	Mm.143789	NM_021411	ENSMUSG00000020732	Rab37	B230331O03Rik|B230354I04Rik	RAB37, member RAS oncogene family	protein-coding
common_peak1-14771-34-22-0.858506570944253-1.68120055799038	chr3	88513728	88515183	+	0	NA	intron (NM_028814, intron 12 of 13)	intron (NM_028814, intron 12 of 13)	-6321	NM_009069	19769	Mm.4009	NM_009069		Rit1	RIBB|ROC1|Rit	Ras-like without CAAX 1	protein-coding
unique_peak1-3368-16-3-2.11826364226806-2.65002542325363	chr19	3319682	3320491	+	0	NA	Intergenic	Intergenic	-3215	NM_013495	12894	Mm.18522	NM_013495	ENSMUSG00000024900	Cpt1a	C730027G07|CPTI|Cpt1	carnitine palmitoyltransferase 1a, liver	protein-coding
common_peak2-27060-41-34-0.571865687903694-1.12519986426579	chr2	181497164	181497804	+	0	NA	promoter-TSS (NM_001171615)	promoter-TSS (NM_001171615)	-553	NM_001171615	17932	Mm.458718	NM_008665	ENSMUSG00000010505	Myt1	Nzf2|Nzf2a|Nzf2b|Nztf2	myelin transcription factor 1	protein-coding
common_peak2-32411-46-70--0.251751176255881-0.468231456109351	chrX	155262380	155263304	+	0	NA	Intergenic	Intergenic	-430872	NM_148945	110651	Mm.328476	NM_148945	ENSMUSG00000031309	Rps6ka3	C130006E23|MAPKAPK-1b|MPK-9|Rsk2|S6K-alpha3|p90RSK3|pp90RSK2	ribosomal protein S6 kinase polypeptide 3	protein-coding
common_peak2-20808-29-87--1.34714153802219-5.27134665442987	chr10	127266269	127266972	+	0	NA	intron (NR_037604, intron 1 of 3)	IAPLTR2a|LTR|ERVK	5348	NR_037604	380674	Mm.384871	NM_199313		Rdh18-ps	Rdh18	retinol dehydrogenase 18, pseudogene	pseudo
unique_peak1-5512-11-4-1.18676548936425-1.68134727924692	chr5	137419674	137420200	+	0	NA	Intergenic	ZP3AR|Satellite|Satellite	-9208	NM_001163243	66437	Mm.25849	NM_025562	ENSMUSG00000019054	Fis1	2010003O14Rik|Ttc11	fission 1 (mitochondrial outer membrane) homolog (yeast)	protein-coding
common_peak2-27895-96-160--0.164865663759288-0.483975347116962	chr4	143211959	143213412	+	0	NA	Intergenic	IAPLTR2a|LTR|ERVK	7779	NM_001126324	279185	Mm.441604	NM_001126324	ENSMUSG00000066688	Gm13083	OTTMUSG00000010327	predicted gene 13083	protein-coding
common_peak1-18157-15-22--0.511397205501357-0.50761186003982	chr8	12758779	12759610	+	0	NA	intron (NR_121603, intron 1 of 29)	intron (NR_121603, intron 1 of 29)	2178	NM_001293667	50770	Mm.257837	NM_015804	ENSMUSG00000031441	Atp11a	4930558F19Rik|AU040868|Atpc1h|Ih	ATPase, class VI, type 11A	protein-coding
common_peak2-20401-41-64--0.321219108179794-0.571074946341596	chr10	22730861	22732302	+	0	NA	Intergenic	URR1A|DNA|MER1_type	-191647	NM_011545	21412	Mm.16497	NM_011545	ENSMUSG00000045680	Tcf21	Pod-1|Pod1|bHLHa23|capsulin|epc|epicardin	transcription factor 21	protein-coding
unique_peak2-33109-5-8--0.874305337448166-1.10484139239135	chr10	81036935	81037487	+	0	NA	promoter-TSS (NM_019725)	promoter-TSS (NM_019725)	-821	NM_019725	21886	Mm.38608	NM_019725	ENSMUSG00000034771	Tle2	Grg2|mKIAA4188	transducin-like enhancer of split 2, homolog of Drosophila E(spl)	protein-coding
unique_peak1-5597-13-6-0.971117108580164-1.01572999746118	chr6	48578356	48579183	+	0	NA	intron (NR_027236, intron 1 of 3)	intron (NR_027236, intron 1 of 3)	603	NR_027236	243373	Mm.26678	NM_177737	ENSMUSG00000053297	AI854703	AI182503|D630044C04	expressed sequence AI854703	pseudo
common_peak1-14163-21-7-1.56948926526624-2.44150343356329	chr2	137419444	137420256	+	0	NA	Intergenic	Intergenic	-477594	NM_013822	16449	Mm.22398	NM_013822	ENSMUSG00000027276	Jag1	ABE2|Gsfabe2|Htu|Ozz|Ser-1	jagged 1	protein-coding
common_peak1-16015-10-16--0.73104749624157-0.604422558181019	chr5	34949400	34950015	+	0	NA	intron (NM_001024458, intron 4 of 14)	intron (NM_001024458, intron 4 of 14)	30056	NM_026660	68294	Mm.34564	NM_026660	ENSMUSG00000001082	Mfsd10	0610009O03Rik|Tetran	major facilitator superfamily domain containing 10	protein-coding
unique_peak2-35904-7-9--0.522837264589173-1.05908390183068	chr19	4191329	4191812	+	0	NA	promoter-TSS (NM_031868)	promoter-TSS (NM_031868)	-523	NM_178650	108995	Mm.288312	NM_178650	ENSMUSG00000040247	Tbc1d10c	1810062O14Rik|AI428527	TBC1 domain family, member 10c	protein-coding
common_peak1-9575-9-7-0.18961340640422-1.05908390183068	chr11	118348552	118349063	+	0	NA	exon (NM_172573, exon 14 of 14)	exon (NM_172573, exon 14 of 14)	10533	NM_172573	217364	Mm.473963	NM_172573	ENSMUSG00000033857	Engase	C130099A03|D230014K01Rik	endo-beta-N-acetylglucosaminidase	protein-coding
unique_peak2-35516-1-5--2.2120195109379-1.32905871926422	chr17	48737646	48737979	+	0	NA	Intergenic	Intergenic	143586	NM_152823	76589	Mm.311629	NM_152823	ENSMUSG00000043592	Unc5cl	2510009H09Rik|BB155270|Zud	unc-5 homolog C (C. elegans)-like	protein-coding
common_peak2-23290-20-20-0.0957573618124323-0.321718508207528	chr15	31224138	31224849	+	0	NA	3' UTR (NM_001164441, exon 4 of 4)	3' UTR (NM_001164441, exon 4 of 4)	70353	NM_146057	223453	Mm.222867	NM_146057	ENSMUSG00000039168	Dap	4921531N22Rik|AI789753|AU040360	death-associated protein	protein-coding
unique_peak1-990-15-1-3.01216475055566-4.18809100057339	chr11	69501487	69502162	+	0	NA	intron (NM_001159503, intron 5 of 12)	ID_B1|SINE|B4	-2768	NM_023517	69583	Mm.8983	NM_023517	ENSMUSG00000089669	Tnfsf13	2310026N09Rik|April|Tall2|Trdl1	tumor necrosis factor (ligand) superfamily, member 13	protein-coding
common_peak1-7504-39-41-0.223443824140393-0.455649802789393	chr1	16103777	16105277	+	0	NA	intron (NM_133832, intron 2 of 5)	intron (NM_133832, intron 2 of 5)	8564	NM_133832	98711	Mm.274376	NM_133832		Rdh10	3110069K09Rik|4921506A21Rik|AI875664|AW549993|D1Ertd762e|m366Asp	retinol dehydrogenase 10 (all-trans)	protein-coding
unique_peak1-2895-11-0-3.50869358425161-3.61235994796777	chr17	44804055	44804587	+	0	NA	intron (NR_073392, intron 4 of 7)	intron (NR_073392, intron 4 of 7)	68804	NR_073425	12393	Mm.391013	NM_009820	ENSMUSG00000039153	Runx2	AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a	runt related transcription factor 2	protein-coding
common_peak2-22559-16-10-0.658832023630764-0.699649909729472	chr13	63187588	63188186	+	0	NA	intron (NM_001289926, intron 5 of 15)	L1_Mus1|LINE|L1	121634	NM_001289924	72061	Mm.188105	NM_028079	ENSMUSG00000021458	2010111I01Rik	2300006M17Rik|AP-O|Aopep	RIKEN cDNA 2010111I01 gene	protein-coding
unique_peak2-35609-7-8--0.370834171144123-1.00793137938329	chr17	83993259	83993758	+	0	NA	intron (NM_153512, intron 1 of 1)	intron (NM_153512, intron 1 of 1)	37727	NM_153512	225030	Mm.223506	NM_153512	ENSMUSG00000045053	Kcng3	KV6.3|Kv10.1a|Kv10.1b	potassium voltage-gated channel, subfamily G, member 3	protein-coding
unique_peak1-1493-16-2-2.53330114154691-3.78760380288747	chr13	90308573	90309198	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	79613	NM_025335	66074	Mm.241387	NM_025335		Tmem167	0610041E09Rik|5730424F14Rik|AU041184|AW537806|ENSMUSG00000060669|Gm10085|Tmem167a	transmembrane protein 167	protein-coding
unique_peak2-35888-4-11--1.6084230145744-1.68134727924692	chr18	88971827	88972509	+	0	NA	Intergenic	RLTR31_Mm|LTR|ERVK	91431	NM_018821	54607	Mm.91920	NM_018821	ENSMUSG00000056153	Socs6	1500012M23Rik|5830401B18Rik|AI447482|Cis4|Cish4|HSPC060|SOCS-4|SOCS-6|SSI4|STAI4|STATI4|Socs4	suppressor of cytokine signaling 6	protein-coding
unique_peak2-34383-0-6--3.64748585253182-1.56314192529759	chr13	117020362	117020780	+	0	NA	Intergenic	(GA)n|Simple_repeat|Simple_repeat	79325	NM_021459	16392	Mm.42242	NM_021459	ENSMUSG00000042258	Isl1	-	ISL1 transcription factor, LIM/homeodomain	protein-coding
common_peak2-30144-27-22-0.467983994838223-0.705485015404196	chr6	145713070	145713910	+	0	NA	Intergenic	Intergenic	-43413	NM_027760	71323	Mm.158669	NM_027760	ENSMUSG00000030259	Rassf8	5133400D11Rik|AA815821|AW123240|Hoj1|mHoj-1	Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	protein-coding
common_peak2-20639-7-10--0.660340788339108-1.12966497611638	chr10	80750510	80751137	+	0	NA	intron (NM_001282095, intron 1 of 20)	intron (NM_001282095, intron 1 of 20)	-2297	NM_001282096	27375	Mm.27984	NM_013769	ENSMUSG00000034917	Tjp3	-	tight junction protein 3	protein-coding
unique_peak2-33212-2-8--2.08737925770563-1.65811743852845	chr10	116196933	116197305	+	0	NA	Intergenic	Intergenic	-30886	NR_045345	72286	Mm.396207	NR_045345		1700030O20Rik	-	RIKEN cDNA 1700030O20 gene	ncRNA
common_peak2-29568-63-98--0.19104402900902-0.443139834627271	chr6	47762706	47764362	+	0	NA	promoter-TSS (NM_009787)	promoter-TSS (NM_009787)	-23	NM_009787	12304	Mm.2442	NM_009787	ENSMUSG00000025823	Pdia4	AI987846|Cai|ERp-72|Erp72	protein disulfide isomerase associated 4	protein-coding
common_peak1-9548-45-65--0.184036094013582-0.387582563723712	chr11	116852342	116853861	+	0	NA	Intergenic	LTR37A|LTR|ERV1	72924	NM_172948	268510	Mm.35141	NM_172948	ENSMUSG00000043857	Mgat5b	C330018B01|GnT-IX|mGnTVB	mannoside acetylglucosaminyltransferase 5, isoenzyme B	protein-coding
common_peak2-20190-21-14-0.662598669657717-0.879255460030357	chr1	172562691	172563296	+	0	NA	Intergenic	ORR1C2|LTR|MaLR	-11670	NM_177068	320078	Mm.287131	NM_177068	ENSMUSG00000038463	Olfml2b	1110018N05Rik|4832415H08Rik|AI467542	olfactomedin-like 2B	protein-coding
unique_peak2-34207-11-21--0.950738034385684-0.991115276827166	chr13	42049287	42050040	+	0	NA	Intergenic	Intergenic	88379	NR_033545	100038577	Mm.387093	NR_033545		Gm10790	ENSMUSG00000074927	predicted gene 10790	ncRNA
unique_peak2-37148-6-35--2.60452689106201-5.23041074693955	chr4	32796299	32797183	+	0	NA	intron (NM_001081392, intron 36 of 101)	intron (NM_001081392, intron 36 of 101)	52647	NM_001081392	100019	Mm.24627	NM_133874	ENSMUSG00000058006	Mdn1	4833432B22Rik|A130070M06|AA958993|D4Abb1e|Gm135	midasin homolog (yeast)	protein-coding
common_peak2-19597-9-9--0.132314688483142-1.03275496310833	chr1	24005397	24005652	+	0	NA	intron (NM_026503, intron 2 of 2)	L1ME1|LINE|L1	6955	NM_026503	68002	Mm.250424	NM_026503	ENSMUSG00000026154	1110058L19Rik	1700001E18Rik|C6orf57	RIKEN cDNA 1110058L19 gene	protein-coding
unique_peak1-4405-9-2-1.60465090568306-1.87199725847353	chr2	167063697	167064179	+	0	NA	intron (NM_008968, intron 1 of 9)	intron (NM_008968, intron 1 of 9)	2099	NM_008968	19223	Mm.2339	NM_008968	ENSMUSG00000017969	Ptgis	Cyp8|Cyp8a1|Pgis	prostaglandin I2 (prostacyclin) synthase	protein-coding
common_peak2-31507-11-13--0.298661337805991-0.337263207250336	chr8	107424567	107425039	+	0	NA	Intergenic	Intergenic	-25357	NM_001163756	234673	Mm.441134	NM_172759	ENSMUSG00000031886	Ces2e	9030624L02Rik|Ces5	carboxylesterase 2E	protein-coding
unique_peak1-3817-11-0-3.50869358425161-3.61235994796777	chr2	66076112	66076681	+	0	NA	intron (NM_001290669, intron 7 of 27)	intron (NM_001290669, intron 7 of 27)	18278	NM_001047604	73668	Mm.250868	NM_001047604	ENSMUSG00000034848	Ttc21b	2410066K11Rik|Thm1|aln|mKIAA1992	tetratricopeptide repeat domain 21B	protein-coding
unique_peak1-7153-14-2-2.31425365963649-3.28500101358144	chr9	57950220	57951002	+	0	NA	promoter-TSS (NM_029212)	promoter-TSS (NM_029212)	-579	NM_029212	382077	Mm.335193	NM_029212	ENSMUSG00000037716	Ccdc33	4930535E21Rik|Gm1117|Tzip1	coiled-coil domain containing 33	protein-coding
unique_peak2-32632-8-14--0.901668177660948-0.660903317613906	chr1	125559122	125559727	+	0	NA	intron (NM_199021, intron 4 of 25)	L1Md_T|LINE|L1	382712	NM_199021	269109	Mm.483255	NM_199021	ENSMUSG00000036815	Dpp10	6430601K09Rik|DPP X|Dprp3	dipeptidylpeptidase 10	protein-coding
unique_peak1-7226-12-5-1.06381348436648-1.78669045979184	chr9	71722108	71722733	+	0	NA	intron (NM_001253862, intron 13 of 19)	intron (NM_001253862, intron 13 of 19)	21483	NM_001253864	21406	Mm.171615	NM_011544	ENSMUSG00000032228	Tcf12	A130037E08Rik|ALF1|HEB|HEBAlt|HTF-4|HTF4|ME1|REB|bHLHb20	transcription factor 12	protein-coding
common_peak2-26913-8-12--0.695217300193522-0.475924844171029	chr2	163017472	163017853	+	0	NA	Intergenic	G-rich|Low_complexity|Low_complexity	-33528	NM_001098799	269389	Mm.207709	NM_001098799	ENSMUSG00000074607	Tox2	AI851523|AV026525|BI987407|Gcx1|RxHMG1	TOX high mobility group box family member 2	protein-coding
common_peak2-27314-23-49--0.922088685265644-1.85759988472352	chr3	65527706	65528346	+	0	NA	intron (NM_001166659, intron 3 of 12)	intron (NM_001166659, intron 3 of 12)	57876	NM_001166659	624866	Mm.296317	NM_001037923	ENSMUSG00000074579	Lekr1	EG546798|EG624866|Gm6534	leucine, glutamate and lysine rich 1	protein-coding
common_peak2-29829-25-22-0.338287949288093-0.51032171069054	chr6	92214083	92214957	+	0	NA	Intergenic	Intergenic	-19876	NM_009426	22044	Mm.1363	NM_009426	ENSMUSG00000005892	Trh	Pro-TRH|Trf	thyrotropin releasing hormone	protein-coding
unique_peak2-38312-1-6--2.43441193227435-1.56314192529759	chr6	143365351	143365683	+	0	NA	Intergenic	(TCTA)n|Simple_repeat|Simple_repeat	171109	NR_027803	52285	Mm.354898	NM_001033129		D6Ertd474e	1700001I24Rik|AU023129	DNA segment, Chr 6, ERATO Doi 474, expressed	ncRNA
unique_peak1-98-9-2-1.60465090568306-1.87199725847353	chr1	51849662	51850241	+	0	NA	intron (NM_001161817, intron 13 of 30)	B1_Mur3|SINE|Alu	122871	NM_001290982	17912	Mm.3390	NM_010863	ENSMUSG00000018417	Myo1b	AA406997|MIH-L|MMIa	myosin IB	protein-coding
common_peak2-32426-19-24--0.241168863113038-0.344491671143527	chrX	166479115	166480224	+	0	NA	Intergenic	Intergenic	-62820	NR_029457	654820	Mm.34441	NM_001039559	ENSMUSG00000072844	G530011O06Rik	-	RIKEN cDNA G530011O06 gene	ncRNA
unique_peak1-7278-9-0-3.18961340640422-3.01029995663981	chr9	100461511	100462036	+	0	NA	intron (NM_001101483, intron 1 of 1)	intron (NM_001101483, intron 1 of 1)	9731	NM_001101483	245020	Mm.236289	NM_001101483	ENSMUSG00000070287	Slc35g2	Gm519|Tmem22	solute carrier family 35, member G2	protein-coding
unique_peak1-5579-14-5-1.31425365963649-1.4372489031793	chr5	149389943	149390611	+	0	NA	Intergenic	Intergenic	-25913	NM_011908	24109	Mm.21846	NM_011908	ENSMUSG00000001687	Ubl3	AW108023|HCG	ubiquitin-like 3	protein-coding
common_peak2-31309-18-10-0.853487532591054-1.03889213727317	chr8	78655576	78656143	+	0	NA	Intergenic	AT_rich|Low_complexity|Low_complexity	683266	NM_001164235	71831	Mm.443238	NM_027944	ENSMUSG00000031620	1700007B14Rik	-	RIKEN cDNA 1700007B14 gene	protein-coding
common_peak2-24170-5-6--0.511735258063458-0.947717972411649	chr16	45841827	45842257	+	0	NA	intron (NM_153412, intron 1 of 17)	MER20|DNA|MER1_type	2449	NM_153412	208177	Mm.211477	NM_153412	ENSMUSG00000033149	Phldb2	AV253284|C820004H04Rik|LL5b|LL5beta	pleckstrin homology-like domain, family B, member 2	protein-coding
common_peak2-19765-8-15--0.994777582052429-0.771068449301683	chr1	79776019	79776616	+	0	NA	intron (NM_001081210, intron 3 of 3)	intron (NM_001081210, intron 3 of 3)	3724	NM_001081210	69163	Mm.238455	NM_001081210	ENSMUSG00000026248	Mrpl44	1810030E18Rik|5730593H20Rik|AI463302	mitochondrial ribosomal protein L44	protein-coding
common_peak2-31139-10-6-0.549060422951165-1.21398586181642	chr8	35432165	35432622	+	0	NA	Intergenic	Lx8|LINE|L1	-202627	NR_105820	102465211		NR_105820	miRBase:MI0021930	Mir6395	mmu-mir-6395	microRNA mir-6395	ncRNA
unique_peak2-36601-3-4--0.73591118484664-0.864171920961574	chr2	177497720	177498113	+	0	NA	intron (NM_001243903, intron 2 of 4)	intron (NM_001243903, intron 2 of 4)	3923	NM_001243903	626802	Mm.386029	NM_001243903		Gm14322	OTTMUSG00000016321	predicted gene 14322	protein-coding
common_peak2-26300-16-16-0.0308008010177225-0.307611222530525	chr2	32288280	32288915	+	0	NA	intron (NM_001164357, intron 1 of 9)	MTD|LTR|MaLR	-1926	NM_001164358	227731	Mm.37395	NM_146118	ENSMUSG00000026819	Slc25a25	1110030N17Rik|MCSC|mKIAA1896	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25	protein-coding
common_peak1-10457-33-11-1.74637506180437-4.10519998339124	chr13	108713286	108714505	+	0	NA	Intergenic	Intergenic	-33637	NM_145456	67263	Mm.490418	NM_145456	ENSMUSG00000032846	Zswim6	2900036G02Rik|mKIAA1577	zinc finger SWIM-type containing 6	protein-coding
common_peak2-32435-12-6-0.841421063030034-1.58711810488664	chrX	169925746	169926082	+	0	NA	Intergenic	Intergenic	-3509065	NR_029457	654820	Mm.34441	NM_001039559	ENSMUSG00000072844	G530011O06Rik	-	RIKEN cDNA G530011O06 gene	ncRNA
unique_peak1-1120-10-2-1.77145284428761-2.09384600808989	chr11	94610977	94611565	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	11225	NM_001105561	217122	Mm.24063	NM_183153		Gm11545	A430060F13Rik|C86086|OTTMUSG00000002043	predicted gene 11545	protein-coding
common_peak1-13835-10-11--0.228547155712387-0.31137425193576	chr2	59611291	59611867	+	0	NA	intron (NM_001290659, intron 6 of 25)	intron (NM_001290659, intron 6 of 25)	109084	NM_001159636	72137	Mm.288734	NM_028118	ENSMUSG00000026988	Wdsub1	1700048E19Rik|2610014F08Rik	WD repeat, SAM and U-box domain containing 1	protein-coding
unique_peak2-32934-0-6--3.64748585253182-1.56314192529759	chr10	34020432	34020723	+	0	NA	3' UTR (NM_030203, exon 1 of 1)	3' UTR (NM_030203, exon 1 of 1)	3350	NM_030203	72480	Mm.21485	NM_030203	ENSMUSG00000039485	Tspyl4	2610102M01Rik|B230210I21Rik|D10Bwg0791e	TSPY-like 4	protein-coding
common_peak1-9311-16-10-0.658832023630764-0.699649909729472	chr11	94226203	94226986	+	0	NA	intron (NM_029600, intron 11 of 30)	intron (NM_029600, intron 11 of 30)	27696	NM_029600	76408	Mm.23942	NM_029600	ENSMUSG00000020865	Abcc3	1700019L09Rik|ABC31|MLP2|MOAT-D|MRP3	ATP-binding cassette, sub-family C (CFTR/MRP), member 3	protein-coding
common_peak2-19651-13-29--1.12841856497075-1.46151065785802	chr1	44119454	44120309	+	0	NA	Intergenic	Intergenic	39352	NM_029368	75623	Mm.348017	NM_029368	ENSMUSG00000026049	Tex30	1700029F09Rik|3110030D08Rik	testis expressed 30	protein-coding
common_peak2-20219-36-37-0.231393572724169-0.470780655014941	chr1	180725919	180726741	+	0	NA	intron (NM_001161665, intron 4 of 14)	intron (NM_001161665, intron 4 of 14)	267074	NM_001161665	269152	Mm.129727	NM_177724	ENSMUSG00000026494	Kif26b	4832420M10|BC056349|D230039L06Rik	kinesin family member 26B	protein-coding
common_peak1-13036-187-205-0.637643256580519-5.81567800992627	chr19	5636472	5638587	+	0	NA	promoter-TSS (NM_009045)	promoter-TSS (NM_009045)	39	NM_009045	19697	Mm.249966	NM_009045	ENSMUSG00000024927	Rela	p65	v-rel reticuloendotheliosis viral oncogene homolog A (avian)	protein-coding
common_peak2-28709-11-24--1.13516260552311-1.3750876294627	chr5	34660452	34661296	+	0	NA	Intergenic	ORR1E|LTR|MaLR	-18165	NM_011278	19822	Mm.21281	NM_011278	ENSMUSG00000029110	Rnf4	AU018689|Gtrgeo8	ring finger protein 4	protein-coding
unique_peak1-3391-12-2-2.06381348436648-2.79529063155376	chr19	4166776	4167428	+	0	NA	intron (NM_134148, intron 9 of 9)	intron (NM_134148, intron 9 of 9)	-3857	NM_021485	58988	Mm.271937	NM_021485	ENSMUSG00000024830	Rps6kb2	70kDa|S6K2	ribosomal protein S6 kinase, polypeptide 2	protein-coding
unique_peak2-38753-7-12--0.901348887842903-1.31827279259406	chr7	118243961	118244409	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	-17641	NM_013507	13690	Mm.185453	NM_013507	ENSMUSG00000005610	Eif4g2	AA589388|DAP-5|E130105L11Rik|Nat1|Natm1|p97	eukaryotic translation initiation factor 4, gamma 2	protein-coding
common_peak2-21962-17-10-0.75886471956774-0.917676348953458	chr12	40016837	40017277	+	0	NA	Intergenic	Lx8|LINE|L1	506759	NM_001163154	14009	Mm.4866	NM_007960	ENSMUSG00000004151	Etv1	ER81|Etsrp81	ets variant 1	protein-coding
common_peak2-21570-31-69--0.904044346131843-2.43183886932982	chr11	97450080	97451125	+	0	NA	Intergenic	Intergenic	-9223	NR_045496	69729	Mm.233452	NR_045496	ENSMUSG00000085860	2410003L11Rik	-	RIKEN cDNA 2410003L11 gene	ncRNA
common_peak2-26280-22-24-0.00342791531268016-0.305461879681376	chr2	30771422	30772606	+	0	NA	Intergenic	Intergenic	-13197	NM_022415	64292	Mm.28768	NM_022415	ENSMUSG00000050737	Ptges	2410099E23Rik|D2Ertd369e|Pges|mPGES|mPGES-1	prostaglandin E synthase	protein-coding
unique_peak1-7179-8-3-1.00522241794757-1.39487600375387	chr9	62454484	62454944	+	0	NA	Intergenic	Intergenic	-69863	NM_175484	235431	Mm.335229	NM_175484	ENSMUSG00000041729	Coro2b	CLIPINC|E130012P22Rik	coronin, actin binding protein, 2B	protein-coding
common_peak1-15529-33-39-0.00940946763816619-0.303778768325576	chr4	118290235	118291494	+	0	NA	intron (NM_026789, intron 1 of 21)	L1MEc|LINE|L1	2146	NM_026789	68625	Mm.256495	NM_026789	ENSMUSG00000028730	Wdr65	1110020C03Rik|AV009650|C130004B06Rik|Gm1363	WD repeat domain 65	protein-coding
common_peak1-9215-32-40--0.0784599853984238-0.303778768325576	chr11	83472437	83473474	+	0	NA	Intergenic	L1MA6|LINE|L1	-3131	NM_013652	20303	Mm.244263	NM_013652	ENSMUSG00000018930	Ccl4	AT744.1|Act-2|MIP-1B|Mip1b|Scya4	chemokine (C-C motif) ligand 4	protein-coding
common_peak2-26597-5-10--1.16381195464315-1.33892459842472	chr2	112284569	112284908	+	0	NA	Intergenic	Intergenic	-10444	NM_133749	73024	Mm.268027	NM_133749		Emc7	2900064A13Rik|AI451465|ORF3|c11orf3	ER membrane protein complex subunit 7	protein-coding
common_peak2-22629-34-76--0.884718013693635-2.45879583194289	chr13	85288255	85289305	+	0	NA	Intergenic	Lx7|LINE|L1	-40302	NM_023243	66671	Mm.18474	NM_023243	ENSMUSG00000021548	Ccnh	6330408H09Rik|AI661354|AV102684|AW538719	cyclin H	protein-coding
common_peak1-9588-10-23--1.22854715571239-1.44380006500971	chr11	119090588	119091072	+	0	NA	intron (NM_175430, intron 1 of 18)	intron (NM_175430, intron 1 of 18)	944	NM_175430	207607	Mm.189885	NM_175430	ENSMUSG00000039963	Ccdc40	B930008I02Rik	coiled-coil domain containing 40	protein-coding
unique_peak1-4423-10-5-0.771452844287613-1.33892459842472	chr2	167867078	167867551	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-31221	NM_001080708	69553	Mm.68454	NM_001080708	ENSMUSG00000074577	Fam65c	2310033K02Rik|Gm124	family with sequence similarity 65, member C	protein-coding
unique_peak1-2262-11-5-0.923731083530457-1.477227296591	chr15	77887151	77887859	+	0	NA	intron (NM_007583, intron 1 of 3)	intron (NM_007583, intron 1 of 3)	62205	NM_007583	12300	Mm.277338	NM_007583		Cacng2	AW060990|B230105C07Rik|B930041E13Rik|stargazer|stargazin|stg|wag|waggler	calcium channel, voltage-dependent, gamma subunit 2	protein-coding
unique_peak1-5078-7-2-1.21412832957703-1.45399745587252	chr4	141564454	141564979	+	0	NA	intron (NM_177868, intron 1 of 31)	B1_Mus2|SINE|Alu	2850	NM_177868	329977	Mm.252019	NM_028429	ENSMUSG00000051435	Fhad1	2900090M10Rik|B230311F11	forkhead-associated (FHA) phosphopeptide binding domain 1	protein-coding
common_peak1-10540-13-9-0.456543935750406-0.53895475198017	chr14	17917437	17918009	+	0	NA	Intergenic	(TTTC)n|Simple_repeat|Simple_repeat	-2878	NM_001289761	218772	Mm.259318	NM_011243	ENSMUSG00000017491	Rarb	A830025K23|Hap|Nr1b2	retinoic acid receptor, beta	protein-coding
common_peak2-30438-21-13-0.762134343208631-1.0220094258199	chr7	44869163	44869852	+	0	NA	Intergenic	Intergenic	1650397	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak2-39705-11-15--0.491306415748387-0.435191258261915	chr9	114781398	114782077	+	0	NA	Intergenic	Intergenic	-28467	NM_027294	70031	Mm.150064	NM_027294	ENSMUSG00000041012	Cmtm8	2700018N07Rik|AA408515|Cklfsf8	CKLF-like MARVEL transmembrane domain containing 8	protein-coding
common_peak2-24406-65-172--0.942462288159597-5.9686692514914	chr17	15040809	15042386	+	0	NA	intron (NM_175173, intron 17 of 24)	intron (NM_175173, intron 17 of 24)	38532	NM_175173	71682	Mm.122698	NM_175173	ENSMUSG00000046991	Wdr27	0610012K18Rik	WD repeat domain 27	protein-coding
common_peak2-30977-8-8--0.164702583494742-1.00793137938329	chr8	3414917	3415334	+	0	NA	intron (NM_133962, intron 1 of 19)	intron (NM_133962, intron 1 of 19)	22117	NM_133962	102098	Mm.170461	NM_133962	ENSMUSG00000004568	Arhgef18	AI467246|D030053O22Rik	rho/rac guanine nucleotide exchange factor (GEF) 18	protein-coding
unique_peak1-789-9-2-1.60465090568306-1.87199725847353	chr11	75071040	75071498	+	0	NA	intron (NM_177708, intron 1 of 1)	intron (NM_177708, intron 1 of 1)	63774	NM_177708	237847	Mm.82661	NM_177708	ENSMUSG00000045287	Rtn4rl1	Ngr3|Ngrh2|Ngrl2	reticulon 4 receptor-like 1	protein-coding
unique_peak1-3832-12-5-1.06381348436648-1.78669045979184	chr2	3239577	3240151	+	0	NA	exon (NM_001290368, exon 11 of 14)	exon (NM_001290368, exon 11 of 14)	10036	NM_001013376	227522	Mm.293948	NM_001013376	ENSMUSG00000049950	Rpp38	C330006A15Rik	ribonuclease P/MRP 38 subunit	protein-coding
unique_peak2-36840-22-33--0.440178736162935-0.541406350295756	chr3	88834811	88836163	+	0	NA	intron (NM_138679, intron 6 of 26)	intron (NM_138679, intron 6 of 26)	58466	NM_001083808	72296	Mm.27687	NM_028188	ENSMUSG00000041263	Rusc1	2210403N08Rik|AA408288|NESCA	RUN and SH3 domain containing 1	protein-coding
common_peak2-29261-20-15-0.488074784591193-0.590343908676236	chr5	140648318	140649024	+	0	NA	intron (NM_010752, intron 11 of 17)	intron (NM_010752, intron 11 of 17)	148835	NM_010752	17120	Mm.27250	NM_010752	ENSMUSG00000029554	Mad1l1	AI173502|AW550425|Mad1	MAD1 mitotic arrest deficient 1-like 1	protein-coding
common_peak1-15917-11-6-0.701338662194009-1.32595962126035	chr5	24030398	24030910	+	0	NA	intron (NM_015739, intron 1 of 1)	intron (NM_015739, intron 1 of 1)	2012	NM_015739	231044	Mm.246596	NM_015739		Gbx1	Gbx-1	gastrulation brain homeobox 1	protein-coding
common_peak2-24050-15-12-0.311725032414564-0.425539671739611	chr16	25424834	25425489	+	0	NA	Intergenic	Intergenic	138258	NM_175165	71338	Mm.126851	NM_175165	ENSMUSG00000048399	Tprg	5430420C16Rik|Tprg1	transformation related protein 63 regulated	protein-coding
unique_peak2-32703-5-6--0.511735258063458-0.947717972411649	chr1	152555903	152556410	+	0	NA	intron (NM_001024720, intron 36 of 106)	L1M4|LINE|L1	-242861	NM_001110146	96875	Mm.174256	NM_021400	ENSMUSG00000006014	Prg4	CACP|DOL54|JCAP|MSF|SZP|lubricin	proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein)	protein-coding
common_peak2-27562-13-28--1.0795089644898-1.33403699391683	chr3	97297314	97298077	+	0	NA	Intergenic	B3|SINE|B2	-82593	NM_146275	258272	Mm.377406	NM_146275	ENSMUSG00000051392	Olfr1402	MOR217-1	olfactory receptor 1402	protein-coding
unique_peak1-1903-8-0-3.00522241794757-2.70926996097583	chr14	67672342	67672711	+	0	NA	intron (NM_001205188, intron 2 of 9)	intron (NM_001205188, intron 2 of 9)	18782	NM_028032	71978	Mm.273997	NM_028032	ENSMUSG00000022052	Ppp2r2a	2410004D02Rik|mKIAA1541	protein phosphatase 2, regulatory subunit B, alpha	protein-coding
unique_peak2-32687-11-10-0.0492619656143161-0.31137425193576	chr1	138929312	138930006	+	0	NA	Intergenic	Intergenic	-72634	NM_030676	26424	Mm.16794	NM_030676	ENSMUSG00000026398	Nr5a2	AU020803|D1Ertd308e|Ftf|LRH-1|UF2-H3B	nuclear receptor subfamily 5, group A, member 2	protein-coding
unique_peak1-2708-9-6-0.382258484346616-1.11707584880836	chr16	91688469	91688892	+	0	NA	promoter-TSS (NR_040389)	promoter-TSS (NR_040389)	293	NM_021720	60364	Mm.328698	NM_021720	ENSMUSG00000022960	Donson	1110025J21Rik|AI845729|ORF60	downstream neighbor of SON	protein-coding
unique_peak1-1553-7-0-2.79909083029819-2.40823996531185	chr13	25563762	25564285	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-202158	NM_009513	22360	Mm.4766	NM_009513	ENSMUSG00000048978	Nrsn1	Neurensin-1|Neuro-p24|Vmp	neurensin 1	protein-coding
common_peak2-28409-11-17--0.661231417190699-0.58239619684445	chr4	141291516	141292018	+	0	NA	Intergenic	ID4|SINE|ID	-10823	NM_001081408	75986	Mm.30032	NM_001081408	ENSMUSG00000040706	Agmat	5033405N08Rik	agmatine ureohydrolase (agmatinase)	protein-coding
common_peak1-13567-11-20--0.883623838527147-0.876666802405043	chr2	6380189	6380658	+	0	NA	Intergenic	Intergenic	106641	NM_181399	98910	Mm.40673	NM_181399	ENSMUSG00000039046	Usp6nl	AI316785|RNTRE|TRE2NL|mKIAA0019	USP6 N-terminal like	protein-coding
common_peak1-8040-11-7-0.508693584251613-1.21681515183528	chr1	171270442	171270922	+	0	NA	Intergenic	L1Md_T|LINE|L1	190913	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
unique_peak2-36191-5-12--1.40482005414695-1.62698961692433	chr2	30952868	30953563	+	0	NA	intron (NM_001038700, intron 2 of 14)	B1_Mur4|SINE|Alu	-1195	NM_001177650	14269	Mm.52297	NM_019406	ENSMUSG00000075415	Fnbp1	1110057E06Rik|2210010H06Rik|FBP1|Fbp17	formin binding protein 1	protein-coding
common_peak2-28897-32-44--0.212761077110015-0.36647540798597	chr5	90890546	90891747	+	0	NA	intron (NM_009654, intron 2 of 14)	intron (NM_009654, intron 2 of 14)	1231	NM_009654	11657	Mm.16773	NM_009654	ENSMUSG00000029368	Alb	Alb-1|Alb1	albumin	protein-coding
common_peak2-32134-38-56--0.261437354866211-0.434791164020309	chr9	106429404	106430162	+	0	NA	Intergenic	B2_Mm2|SINE|B2	12879	NM_029300	75470	Mm.63799	NM_029300	ENSMUSG00000066382	Iqcf5	1700007L12Rik	IQ motif containing F5	protein-coding
common_peak2-23475-15-10-0.552733131918359-0.604422558181019	chr15	73435129	73435662	+	0	NA	intron (NM_001033219, intron 2 of 7)	intron (NM_001033219, intron 2 of 7)	-8439	NM_001168255	106068	Mm.212813	NM_001033219	ENSMUSG00000079020	Slc45a4	9330175B01Rik|AW552276	solute carrier family 45, member 4	protein-coding
common_peak2-21303-15-19--0.309763344331706-0.356936432242222	chr11	73047869	73048429	+	0	NA	Intergenic	Intergenic	-3612	NM_001001445	193034	Mm.447485	NM_001001445	ENSMUSG00000005952	Trpv1	OTRPC1|TRPV1alpha|TRPV1beta|VR-1|Vr1	transient receptor potential cation channel, subfamily V, member 1	protein-coding
unique_peak2-38694-12-29--1.25811461052088-1.65862513589797	chr7	102250369	102251151	+	0	NA	Intergenic	Intergenic	-1108387	NM_011858	23966	Mm.254610	NM_011858	ENSMUSG00000048078	Tenm4	Doc4|ELM2|Odz4|R75022|Ten-m4|l(7)-3Rn|l7Rn3|mKIAA1302	teneurin transmembrane protein 4	protein-coding
common_peak2-20180-44-45-0.298330878511522-0.60830192689697	chr1	172082133	172083514	+	0	NA	intron (NM_133806, intron 5 of 10)	intron (NM_133806, intron 5 of 10)	22254	NM_133806	107652	Mm.27969	NM_133806	ENSMUSG00000026670	Uap1	AA420407|AA437972|AGX-1|AGX-2|AGX1|AgX|ESTM38|SPAG2	UDP-N-acetylglucosamine pyrophosphorylase 1	protein-coding
unique_peak2-39928-5-6--0.511735258063458-0.947717972411649	chrX	106015718	106016129	+	0	NA	intron (NM_001081477, intron 6 of 40)	A-rich|Low_complexity|Low_complexity	13771	NM_001081477	382236	Mm.100112	NM_001081477	ENSMUSG00000063663	Brwd3	Brodl|D030064D06Rik|Gm596	bromodomain and WD repeat domain containing 3	protein-coding
common_peak1-12140-7-6--0.00826409175941478-0.97990265578305	chr17	27780601	27781068	+	0	NA	Intergenic	Intergenic	-8647	NM_025963	67097	Mm.275810	NM_025963	ENSMUSG00000052146	Rps10	2210402A09Rik	ribosomal protein S10	protein-coding
common_peak2-30987-19-15-0.402687326661686-0.519193887192487	chr8	3631038	3631899	+	0	NA	intron (NM_011503, intron 1 of 18)	intron (NM_011503, intron 1 of 18)	308	NM_011503	20911	Mm.7247	NM_011503	ENSMUSG00000004626	Stxbp2	C79054|Munc-18-2|Munc-18b|Munc18b|Sxtbp2|Sxtp2|Unc18-2|Unc18b|muSec1	syntaxin binding protein 2	protein-coding
common_peak2-28745-29-27-0.304935158557507-0.525808162491371	chr5	36796000	36796871	+	0	NA	Intergenic	Intergenic	-11399	NM_024478	17713	Mm.21535	NM_024478	ENSMUSG00000029198	Grpel1	AA408748|mt-GrpE#1|mt-Grpel1	GrpE-like 1, mitochondrial	protein-coding
common_peak2-23470-8-5-0.420259917226415-1.10484139239135	chr15	73183582	73183927	+	0	NA	intron (NM_007982, intron 2 of 31)	B2_Mm2|SINE|B2	69867	NM_007982	14083	Mm.254494	NM_007982	ENSMUSG00000022607	Ptk2	FAK|FRNK|Fadk|mKIAA4203|p125FAK	PTK2 protein tyrosine kinase 2	protein-coding
common_peak2-26088-58-35-1.12602493344818-4.08621821320449	chr2	157203867	157205295	+	0	NA	intron (NM_026968, intron 1 of 2)	intron (NM_026968, intron 1 of 2)	11251	NM_026968	69161	Mm.228619	NM_026968	ENSMUSG00000063019	Manbal	1810024K12Rik|AI836500	mannosidase, beta A, lysosomal-like	protein-coding
unique_peak2-39894-5-8--0.874305337448166-1.10484139239135	chrX	85776339	85776780	+	0	NA	Intergenic	Intergenic	228333	NR_035440	100316809		NR_035440	miRBase:MI0008321	Mir1906-1	Mir1906|Mirn1906|mmu-mir-1906|mmu-mir-1906-1	microRNA 1906-1	ncRNA
common_peak2-26645-14-14--0.00767443525087419-0.308519316180257	chr2	119787155	119787690	+	0	NA	intron (NM_001164274, intron 21 of 22)	intron (NM_001164274, intron 21 of 22)	-11013	NM_011941	26390	Mm.330501	NM_011941	ENSMUSG00000033902	Mapkbp1	2810483F24Rik|AW123212|JNKBP-1|Jnkbp1|mKIAA0596	mitogen-activated protein kinase binding protein 1	protein-coding
common_peak2-29062-41-47-0.116186204127504-0.355888493228951	chr5	117133612	117134918	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-92439	NM_026886	68955	Mm.146779	NM_026886	ENSMUSG00000063919	Srrm4	1500001A10Rik|B230202K19Rik|bv|mKIAA1853|nSR100	serine/arginine repetitive matrix 4	protein-coding
unique_peak1-1678-8-1-2.00522241794757-2.05605744720049	chr13	72638415	72638942	+	0	NA	Intergenic	Intergenic	127334	NR_030701	328287	Mm.235072	NR_030701		Gm20554	D430050G20	predicted gene, 20554	ncRNA
common_peak1-16165-112-131-0.388856180961829-1.56509483263976	chr5	86803677	86805351	+	0	NA	Intergenic	Intergenic	-2102	NM_145561	231382	Mm.240139	NM_145561		Tmprss11d	AST|AsP|BC020151	transmembrane protease, serine 11d	protein-coding
unique_peak1-4607-11-1-2.50869358425161-2.83420869758413	chr3	65689766	65690302	+	0	NA	Intergenic	MER46C|DNA|MER2_type	72113	NM_019937	56706	Mm.175612	NM_019937	ENSMUSG00000027829	Ccnl1	2610030E23Rik|AU018493|Ccnl|ania-6a	cyclin L1	protein-coding
common_peak1-12092-16-17--0.0516613591742505-0.301029995663984	chr17	25015053	25015858	+	0	NA	promoter-TSS (NM_008340)	promoter-TSS (NM_008340)	-260	NM_008340	16005	Mm.3135	NM_008340	ENSMUSG00000046070	Igfals	ALS|Albs|mKIAA4111	insulin-like growth factor binding protein, acid labile subunit	protein-coding
unique_peak1-717-11-4-1.18676548936425-1.68134727924692	chr10	90966203	90966685	+	0	NA	Intergenic	GA-rich|Low_complexity|Low_complexity	-332080	NM_001080130	21917	Mm.159684	NM_011605	ENSMUSG00000019961	Tmpo	5630400D24Rik|AI195756|AI606875|AW214352|AW547477|LAP2|TP	thymopoietin	protein-coding
common_peak2-29123-42-50-0.0699039858956887-0.334445504886124	chr5	124031463	124032395	+	0	NA	intron (NM_019765, intron 22 of 23)	intron (NM_019765, intron 22 of 23)	-8905	NM_029929	77573	Mm.41372	NM_029929	ENSMUSG00000029434	Vps33a	3830421M04Rik|AI503300|AW048546|AW554476|bf	vacuolar protein sorting 33A (yeast)	protein-coding
common_peak2-28293-34-31-0.382068527001266-0.662333595915619	chr4	131873578	131874260	+	0	NA	intron (NM_027925, intron 6 of 8)	B1_Mus1|SINE|Alu	7301	NR_028537	100217437		NR_028537		Snord99	MBII-420	small nucleolar RNA, C/D box 99	snoRNA
unique_peak1-4809-17-6-1.41094141614743-1.84350559086818	chr3	142315833	142316646	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-29329	NR_105802	102465200		NR_105802	miRBase:MI0021912	Mir6381	mmu-mir-6381	microRNA mir-6381	ncRNA
common_peak1-11433-18-11-0.727956650507195-0.876666802405043	chr15	99865903	99866793	+	0	NA	Intergenic	B3|SINE|B2	-2747	NM_001159361	239667	Mm.243658	NM_172819	ENSMUSG00000023026	Dip2b	4932422C22|AI317237|AI854602|mKIAA1463	DIP2 disco-interacting protein 2 homolog B (Drosophila)	protein-coding
common_peak2-20715-33-53--0.423549939637939-0.696926118858569	chr10	94687895	94689316	+	0	NA	intron (NM_009950, intron 2 of 2)	intron (NM_009950, intron 2 of 2)	98126	NM_009950	12905	Mm.473739	NM_009950	ENSMUSG00000045867	Cradd	RAIDD	CASP2 and RIPK1 domain containing adaptor with death domain	protein-coding
common_peak1-14807-26-52--0.800021362404737-1.59856525524509	chr3	90265017	90265889	+	0	NA	intron (NM_008727, intron 5 of 21)	intron (NM_008727, intron 5 of 21)	4335	NM_008727	18160	Mm.4627	NM_008727	ENSMUSG00000027931	Npr1	AI893888|GC-A|NPR-A|NPRA|Pndr	natriuretic peptide receptor 1	protein-coding
unique_peak2-38496-2-5--1.50241675698448-1.08602067057793	chr7	35754548	35754907	+	0	NA	intron (NM_008820, intron 8 of 14)	ORR1E|LTR|MaLR	57301	NM_008820	18624	Mm.69751	NM_008820	ENSMUSG00000063931	Pepd	Pep-4|Pep4	peptidase D	protein-coding
unique_peak2-34645-7-7--0.200909169701811-0.97990265578305	chr14	105663167	105663613	+	0	NA	intron (NM_001190989, intron 1 of 7)	Lx8|LINE|L1	5500	NM_001190989	76273	Mm.290669	NM_029561	ENSMUSG00000053253	Ndfip2	0710001O20Rik|2810436B12Rik|9130207N19Rik|N4wbp5a|mKIAA1165	Nedd4 family interacting protein 2	protein-coding
common_peak1-12220-9-12--0.510826311736872-0.394412252720706	chr17	34850447	34851062	+	0	NA	intron (NM_031176, intron 19 of 32)	intron (NM_031176, intron 19 of 32)	30088	NM_009780	12268	Mm.477109	NM_009780	ENSMUSG00000073418	C4b	C4|Ss	complement component 4B (Chido blood group)	protein-coding
unique_peak1-3525-11-6-0.701338662194009-1.32595962126035	chr19	20399433	20400021	+	0	NA	Intergenic	(TAGA)n|Simple_repeat|Simple_repeat	65434	NM_010730	16952	Mm.248360	NM_010730	ENSMUSG00000024659	Anxa1	Anx-1|Anx-A1|C430014K04Rik|Lpc-1|Lpc1	annexin A1	protein-coding
common_peak1-14563-28-46--0.501629731856175-0.767679714496325	chr3	36863041	36863917	+	0	NA	intron (NM_172679, intron 37 of 85)	L1_Mur2|LINE|L1	-99099	NM_009350	21744	Mm.8122	NM_009350	ENSMUSG00000027719	Adad1	Tenr	adenosine deaminase domain containing 1 (testis specific)	protein-coding
common_peak2-29952-32-26-0.524204517056192-0.869438253311882	chr6	117841072	117841873	+	0	NA	Intergenic	Intergenic	-8886	NM_001166432	98758	Mm.422979	NM_133834	ENSMUSG00000042079	Hnrnpf	4833420I20Rik|AA407306|Hnrpf	heterogeneous nuclear ribonucleoprotein F	protein-coding
common_peak1-11734-13-13--0.0288828914198356-0.309074325783021	chr16	33777736	33778298	+	0	NA	Intergenic	Intergenic	-16106	NM_010739	17063	Mm.3177	NM_010739	ENSMUSG00000022824	Muc13	114/A10|14/A10|AI159736|Lrrp|Ly64|NJ-1	mucin 13, epithelial transmembrane	protein-coding
unique_peak1-7230-9-6-0.382258484346616-1.11707584880836	chr9	74908774	74909294	+	0	NA	TTS (NM_021548)	TTS (NM_021548)	-9979	NM_010864	17918	Mm.3645	NM_010864	ENSMUSG00000034593	Myo5a	9630007J19Rik|AI413174|AI661011|Dbv|MVa|Myo5|MyoVA|Sev-1|d|d-120J|flail|flr	myosin VA	protein-coding
common_peak2-29445-15-12-0.311725032414564-0.425539671739611	chr6	17354339	17354999	+	0	NA	Intergenic	Intergenic	-59288	NM_008591	17295	Mm.86844	NM_008591	ENSMUSG00000009376	Met	AI838057|HGF|HGFR|Par4|c-Met	met proto-oncogene	protein-coding
common_peak2-26424-35-27-0.6240153364049-1.10223211335955	chr2	60901430	60902283	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-88648	NR_045335	100038493	Mm.388076	NR_045335	ENSMUSG00000075325	Gm13582	ENSMUSG00000075325|OTTMUSG00000012844	predicted gene 13582	ncRNA
common_peak1-15004-12-14--0.25811461052088-0.309074325783021	chr3	108881821	108882399	+	0	NA	Intergenic	B3A|SINE|B2	-1307	NM_029054	74686	Mm.307948	NM_029054	ENSMUSG00000027880	Slc25a54	4930443G12Rik|SCaMC-1like	solute carrier family 25, member 54	protein-coding
unique_peak2-33732-4-5--0.608423014574403-0.909929411522249	chr11	115903300	115903724	+	0	NA	intron (NM_172569, intron 1 of 15)	intron (NM_172569, intron 1 of 15)	11882	NM_172569	217331	Mm.297706	NM_172569	ENSMUSG00000020770	Unk	B230379M23Rik|Zc3h5|Zc3hdc5|mKIAA1753	unkempt homolog (Drosophila)	protein-coding
common_peak1-18905-15-29--0.894725845052863-1.1282783422172	chr9	40798623	40799524	+	0	NA	intron (NM_019465, intron 3 of 9)	intron (NM_019465, intron 3 of 9)	13638	NM_001281954	54698	Mm.42791	NM_019465	ENSMUSG00000032021	Crtam	-	cytotoxic and regulatory T cell molecule	protein-coding
common_peak1-14885-24-15-0.793209902767717-1.16796998271032	chr3	96086237	96087430	+	0	NA	TTS (NM_010186)	TTS (NM_010186)	11059	NM_010186	14129	Mm.150	NM_010186	ENSMUSG00000015947	Fcgr1	AI323638|AV092959|CD64|FcgammaRI|IGGHAFC	Fc receptor, IgG, high affinity I	protein-coding
common_peak1-8714-71-77-0.359041959857723-0.951856920429998	chr11	98794269	98796762	+	0	NA	Intergenic	Intergenic	-3495	NM_009024	19401	Mm.439744	NM_009024	ENSMUSG00000037992	Rara	Nr1b1|RAR|RARalpha1	retinoic acid receptor, alpha	protein-coding
common_peak2-25795-8-14--0.901668177660948-0.660903317613906	chr19	36918265	36918806	+	0	NA	intron (NM_001163635, intron 1 of 26)	B4A|SINE|B4	9813	NM_001163635	74493	Mm.249310	NM_001163635	ENSMUSG00000024811	Tnks2	5430432P15Rik|AA517131|AI662480|ARTD6|TNKS-2|Tank2	tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2	protein-coding
common_peak1-18724-18-28--0.54506184389922-0.591915184368642	chr8	123212182	123212964	+	0	NA	Intergenic	Intergenic	20353	NM_001293559	12857	Mm.386758	NM_009941	ENSMUSG00000031818	Cox4i1	AL024441|COX|COX IV-1|COXIV|Cox4|Cox4a|IV-1	cytochrome c oxidase subunit IV isoform 1	protein-coding
common_peak1-10317-23-32--0.322626614849373-0.436052471002795	chr13	69534802	69535543	+	0	NA	Intergenic	Intergenic	137570	NM_198600	210106	Mm.315959	NM_198600	ENSMUSG00000034575	Papd7	LAK-1|POLK|Pols|TRF4|TRF4-1	PAP associated domain containing 7	protein-coding
unique_peak1-2070-10-5-0.771452844287613-1.33892459842472	chr15	35775073	35775592	+	0	NA	intron (NM_177151, intron 42 of 61)	intron (NM_177151, intron 42 of 61)	92669	NM_053071	12864	Mm.548	NM_053071	ENSMUSG00000014313	Cox6c	-	cytochrome c oxidase subunit VIc	protein-coding
common_peak1-10111-19-22--0.120874629395327-0.306080386793804	chr13	29855017	29855753	+	0	NA	intron (NM_144536, intron 5 of 15)	MTE-int|LTR|MaLR	92072	NM_144536	68916	Mm.212227	NM_144536	ENSMUSG00000006191	Cdkal1	1190005B03Rik|6620401C13Rik	CDK5 regulatory subunit associated protein 1-like 1	protein-coding
common_peak2-26428-45-48-0.245648181229663-0.50619083865892	chr2	61711651	61712508	+	0	NA	Intergenic	L1Md_F2|LINE|L1	69569	NM_009322	21375	Mm.308525	NM_009322	ENSMUSG00000035033	Tbr1	-	T-box brain gene 1	protein-coding
common_peak2-21566-25-25-0.161410187204014-0.36542888694933	chr11	97415546	97416455	+	0	NA	intron (NM_018873, intron 1 of 19)	Lx5|LINE|L1	20440	NM_018873	56013	Mm.342665	NM_018873	ENSMUSG00000038453	Srcin1	P140|SNIP|mKIAA1684|p140Cap	SRC kinase signaling inhibitor 1	protein-coding
unique_peak2-33588-0-13--4.64748585253181-3.36932189928148	chr11	87662835	87663354	+	0	NA	Intergenic	BGLII|LTR|ERVK	-3633	NM_001039684	380718	Mm.24404	NM_001039684	ENSMUSG00000034121	Mks1	AK190930|B8d3	Meckel syndrome, type 1	protein-coding
common_peak2-22490-11-17--0.661231417190699-0.58239619684445	chr13	49682148	49682610	+	0	NA	intron (NM_012050, intron 1 of 3)	Lx3_Mus|LINE|L1	4263	NM_012050	27047	Mm.390589	NM_012050	ENSMUSG00000048368	Omd	OSAD|SLRR2C	osteomodulin	protein-coding
unique_peak1-3557-13-5-1.19350952991661-1.95509489018123	chr19	24672494	24673085	+	0	NA	Intergenic	Intergenic	-42472	NM_008846	18719	Mm.217214	NM_008846	ENSMUSG00000024867	Pip5k1b	PI4P5K-I[b]|PIP5K1-beta|PIP5KIbeta|Pipk5b|STM7	phosphatidylinositol-4-phosphate 5-kinase, type 1 beta	protein-coding
common_peak1-19247-14-28--0.958764834769927-1.16796998271031	chr9	109931243	109931935	+	0	NA	intron (NM_001205332, intron 5 of 17)	intron (NM_001205332, intron 5 of 17)	72002	NM_001252683	72831	Mm.276305	NM_133347	ENSMUSG00000032480	Dhx30	2810477H02Rik|C130058C04Rik|Ddx30|HELG|Ret-CoR	DEAH (Asp-Glu-Ala-His) box polypeptide 30	protein-coding
common_peak1-8226-19-12-0.702247608520594-0.840839978588874	chr10	11342995	11343889	+	0	NA	Intergenic	L1Md_T|LINE|L1	280199	NM_010146	13853	Mm.89946	NM_010146		Epm2a	TG-B|Tg(TcraK,TcrbK)TG-BFlv	epilepsy, progressive myoclonic epilepsy, type 2 gene alpha	protein-coding
unique_peak1-1834-10-2-1.77145284428761-2.09384600808989	chr14	40991672	40992197	+	0	NA	Intergenic	Intergenic	522983	NR_045936	73591	Mm.65499	NR_045936		1700109I08Rik	-	RIKEN cDNA 1700109I08 gene	ncRNA
common_peak2-30770-4-7--1.02346051385325-1.09384600808989	chr7	125444995	125445246	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	57699	NR_027879	67745	Mm.483404	NM_183267	ENSMUSG00000055159	4930583K01Rik	-	RIKEN cDNA 4930583K01 gene	ncRNA
common_peak2-25148-20-43--0.971356834046104-1.80105410004791	chr18	46596768	46597558	+	0	NA	Intergenic	Intergenic	28307	NR_045438	72076	Mm.82766	NM_028086	ENSMUSG00000046487	Mospd4	2010013H21Rik	motile sperm domain containing 4	pseudo
common_peak1-16268-26-30--0.0262972182284127-0.301029995663988	chr5	107996080	107996872	+	0	NA	intron (NM_133248, intron 8 of 18)	B3A|SINE|B2	-29916	NM_001163462	231571	Mm.482420	NM_144911	ENSMUSG00000033773	Rpap2	AW060207	RNA polymerase II associated protein 2	protein-coding
common_peak2-21423-12-10-0.189344366450341-0.386243247519795	chr11	84869415	84869924	+	0	NA	intron (NM_001029934, intron 6 of 33)	ORR1B1|LTR|MaLR	83788	NM_001029934	237898	Mm.178524	NM_001029934	ENSMUSG00000000804	Usp32	2900074J03Rik|6430526O11Rik|AW045245	ubiquitin specific peptidase 32	protein-coding
common_peak2-30293-24-40--0.564342101850367-0.763288167491253	chr7	19269722	19271077	+	0	NA	intron (NM_054058, intron 1 of 5)	intron (NM_054058, intron 1 of 5)	942	NM_054058	434540	Mm.479863	NM_054058		Psg20	Cea7|EG434540	pregnancy-specific glycoprotein 20	protein-coding
unique_peak2-39179-5-5--0.289342836727009-0.909929411522249	chr8	95067317	95067742	+	0	NA	Intergenic	Intergenic	-130659	NM_022428	64379	Mm.137247	NM_022428		Irx6	-	Iroquois related homeobox 6 (Drosophila)	protein-coding
unique_peak1-6823-11-5-0.923731083530457-1.477227296591	chr8	77287820	77288324	+	0	NA	Intergenic	MIR|SINE|MIR	-109001	NM_027837	71597	Mm.158735	NM_027837	ENSMUSG00000031621	Isx	9130012O13Rik|Pix-1	intestine specific homeobox	protein-coding
common_peak2-21694-10-11--0.228547155712387-0.31137425193576	chr11	106255901	106256582	+	0	NA	Intergenic	Intergenic	-12286	NM_010494	15896	Mm.394	NM_010494	ENSMUSG00000001029	Icam2	CD102|Icam-2|Ly-60	intercellular adhesion molecule 2	protein-coding
common_peak2-20699-11-13--0.298661337805991-0.337263207250336	chr10	93325901	93326281	+	0	NA	intron (NM_019648, intron 9 of 11)	intron (NM_019648, intron 9 of 11)	27856	NM_019648	56307	Mm.289329	NM_019648	ENSMUSG00000036112	Metap2	4930584B20Rik|A930035J23Rik|AI047573|AL024412|AU014659|Amp2|Mnpep|p67|p67eIF2	methionine aminopeptidase 2	protein-coding
unique_peak2-37126-10-27--1.45093957704883-2.06249767704514	chr4	11253553	11254491	+	0	NA	Intergenic	MYSERV6-int|LTR|ERVK	-4744	NM_001081201	381510	Mm.331486	NM_001081201	ENSMUSG00000045205	Dpy19l4	Gm1023|Narg3	dpy-19-like 4 (C. elegans)	protein-coding
unique_peak1-2741-10-2-1.77145284428761-2.09384600808989	chr16	97734304	97734908	+	0	NA	Intergenic	Intergenic	-8063	NM_020622	52793	Mm.327932	NM_020622	ENSMUSG00000022938	Fam3b	2-21|9030624C24Rik|D16Jhu19e|ORF9|Pander	family with sequence similarity 3, member B	protein-coding
common_peak1-7915-31-32-0.18084455145467-0.379775532323848	chr1	136695524	136696719	+	0	NA	intron (NM_001081307, intron 18 of 23)	(CAGG)n|Simple_repeat|Simple_repeat	4177	NR_015606	329251	Mm.188709	NM_001081307	ENSMUSG00000073557	Ppp1r12b	1810037O03Rik|9530009M10Rik|AI132431|Mypt2	protein phosphatase 1, regulatory (inhibitor) subunit 12B	protein-coding
unique_peak1-6179-32-6-2.47173709716206-6.173243856988	chr6	145932654	145933151	+	0	NA	Intergenic	Intergenic	50235	NM_010656	16651	Mm.49689	NM_010656	ENSMUSG00000030255	Sspn	Krag	sarcospan	protein-coding
common_peak1-16963-81-122--0.0704649023306745-0.323745799370708	chr6	85960708	85962125	+	0	NA	Intergenic	B3|SINE|B2	-5769	NM_012013	26910	Mm.8024	NM_012013	ENSMUSG00000030001	Figla	bHLHc8	folliculogenesis specific basic helix-loop-helix	protein-coding
unique_peak2-36512-11-18--0.739233929191972-0.671582559449692	chr2	157715685	157716323	+	0	NA	intron (NM_025680, intron 15 of 15)	intron (NM_025680, intron 15 of 15)	-24385	NM_198627	277432	Mm.441156	NM_198627	ENSMUSG00000037843	Vstm2l	Gm691	V-set and transmembrane domain containing 2-like	protein-coding
common_peak1-11471-65-117--0.390477109884714-1.06794926236629	chr15	102002728	102004855	+	0	NA	Intergenic	L1M4|LINE|L1	15683	NM_144942	246277	Mm.296382	NM_144942	ENSMUSG00000023044	Csad	Csd	cysteine sulfinic acid decarboxylase	protein-coding
common_peak1-8230-24-55--1.01414501928989-2.24341076832583	chr10	12868923	12869730	+	0	NA	TTS (NM_029172)	TTS (NM_029172)	28503	NM_029172	75122	Mm.159433	NM_029172	ENSMUSG00000019815	Zc2hc1b	4930519B02Rik|Fam164b	zinc finger, C2HC-type containing 1B	protein-coding
common_peak1-16611-10-10--0.103016273628528-0.301029995663987	chr5	151165870	151166386	+	0	NA	intron (NM_172887, intron 11 of 60)	RMER17B|LTR|ERVK	103623	NM_172887	320365	Mm.216590	NM_172887	ENSMUSG00000056602	Fry	13CDNA73|9330186A19Rik|AF346502|AI462658|C87180|D930046M03|cg003|mKIAA4143	furry homolog (Drosophila)	protein-coding
common_peak2-25156-22-21-0.187852486450107-0.376654945067947	chr18	49832643	49833277	+	0	NA	Intergenic	L1Md_A|LINE|L1	82295	NM_026854	68857	Mm.96010	NM_026854	ENSMUSG00000024505	Dtwd2	1190002H09Rik|8030470C17Rik|AI414673|BB115449	DTW domain containing 2	protein-coding
common_peak2-20574-13-8-0.608547029195456-0.660903317613904	chr10	77151270	77151719	+	0	NA	intron (NM_001287074, intron 1 of 11)	intron (NM_001287074, intron 1 of 11)	2008	NM_001205032	100502831	Mm.486158	NM_001205032	ENSMUSG00000095970	Gm19402	-	predicted gene, 19402	protein-coding
common_peak2-28092-14-8-0.729291158915332-0.771068449301682	chr4	86671828	86672255	+	0	NA	intron (NM_172426, intron 7 of 10)	intron (NM_172426, intron 7 of 10)	151723	NM_139306	230379	Mm.45019	NM_139306	ENSMUSG00000038007	Acer2	2410116I05Rik|Asah3l|CRG-L1|maCER2	alkaline ceramidase 2	protein-coding
unique_peak2-38438-4-7--1.02346051385325-1.09384600808989	chr7	27356164	27356671	+	0	NA	exon (NM_001048219, exon 9 of 10)	exon (NM_001048219, exon 9 of 10)	36333	NM_001048219	233001	Mm.11889	NM_194056	ENSMUSG00000054102	Nlrp9a	D7Ertd565e|Nalp-theta|Nalp9a	NLR family, pyrin domain containing 9A	protein-coding
unique_peak2-34764-4-6--0.830815435910851-0.989110657569874	chr15	58381608	58381993	+	0	NA	Intergenic	Intergenic	134777	NM_145959	210998	Mm.3224	NM_145959	ENSMUSG00000037119	D15Ertd621e	AV220772|BC033609|Fam91a1|SKIN|mKIAA0493	DNA segment, Chr 15, ERATO Doi 621, expressed	protein-coding
common_peak2-29740-17-22--0.305265617851975-0.348739088570342	chr6	86194840	86195573	+	0	NA	intron (NM_031199, intron 2 of 5)	intron (NM_031199, intron 2 of 5)	49961	NM_031199	21802	Mm.137222	NM_031199	ENSMUSG00000029999	Tgfa	wa-1|wa1	transforming growth factor alpha	protein-coding
common_peak1-15780-10-10--0.103016273628528-0.301029995663987	chr4	155222238	155222750	+	0	NA	intron (NM_010091, intron 1 of 14)	intron (NM_010091, intron 1 of 14)	973	NM_010091	13542	Mm.3400	NM_010091	ENSMUSG00000029071	Dvl1	Dvl|mKIAA4029	dishevelled, dsh homolog 1 (Drosophila)	protein-coding
common_peak1-15758-8-13--0.802132504110034-0.562038191119711	chr4	150707519	150708032	+	0	NA	intron (NM_001081557, intron 5 of 23)	intron (NM_001081557, intron 5 of 23)	-275713	NM_009498	22319	Mm.273930	NM_009498	ENSMUSG00000028955	Vamp3	D130027G05Rik|VAMP-3|ceb	vesicle-associated membrane protein 3	protein-coding
unique_peak2-35412-1-5--2.2120195109379-1.32905871926422	chr17	33643752	33644186	+	0	NA	Intergenic	Intergenic	-17172	NR_037707	224697	Mm.29304	NM_172619	ENSMUSG00000024299	Adamts10	9430006O18|AW045948|Adam-ts10|Adamts-10|Znmp	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10	protein-coding
common_peak2-25042-39-52--0.112159207644045-0.320382596085891	chr18	31803913	31804927	+	0	NA	intron (NM_172965, intron 2 of 20)	Lx7|LINE|L1	10383	NM_172965	269003	Mm.194538	NM_172965	ENSMUSG00000024260	Sap130	2610304F09Rik|6720406D06	Sin3A associated protein	protein-coding
unique_peak1-344-8-0-3.00522241794757-2.70926996097583	chr1	135131003	135131523	+	0	NA	Intergenic	Intergenic	-11411	NM_001160268	240753	Mm.253559	NM_182930	ENSMUSG00000041757	Plekha6	9530028L01Rik|AU042621|Pepp3	pleckstrin homology domain containing, family A member 6	protein-coding
common_peak2-29527-19-18-0.154759813218101-0.351190433797598	chr6	37618061	37618598	+	0	NA	Intergenic	RCHARR1|DNA|MER1_type	138156	NM_145364	208665	Mm.262635	NM_145364	ENSMUSG00000038641	Akr1d1	-	aldo-keto reductase family 1, member D1	protein-coding
common_peak1-13555-10-14--0.550475250599749-0.446472590016315	chr2	5067528	5068007	+	0	NA	intron (NM_028804, intron 2 of 2)	intron (NM_028804, intron 2 of 2)	8945	NM_028804	74186	Mm.274715	NM_028804	ENSMUSG00000026676	Ccdc3	2310045O21Rik	coiled-coil domain containing 3	protein-coding
unique_peak2-37866-0-5--3.42509343119537-1.32905871926422	chr5	137455157	137455555	+	0	NA	Intergenic	RSINE1|SINE|B4	-7533	NM_011962	26433	Mm.251003	NM_011962	ENSMUSG00000004846	Plod3	AI414586|LH3	procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3	protein-coding
unique_peak2-37738-2-9--2.23938235115068-1.87199725847353	chr5	110110114	110110605	+	0	NA	Intergenic	ORR1D2-int|LTR|MaLR	-122347	NM_001164735	57914	Mm.35771	NM_016715	ENSMUSG00000033467	Crlf2	CRLM2|Ly114|Tpte2|Tslpr	cytokine receptor-like factor 2	protein-coding
common_peak2-25858-16-17--0.0516613591742505-0.301029995663984	chr19	42676842	42677733	+	0	NA	intron (NM_001164311, intron 9 of 14)	intron (NM_001164311, intron 9 of 14)	10009	NM_001164311	67573	Mm.178767	NM_053083	ENSMUSG00000025185	Loxl4	4833426I20Rik|Loxc	lysyl oxidase-like 4	protein-coding
common_peak2-21637-56-59-0.328705229830724-0.716869875017263	chr11	101442169	101442949	+	0	NA	promoter-TSS (NM_144830)	promoter-TSS (NM_144830)	-997	NM_144830	217203	Mm.280559	NM_144830	ENSMUSG00000034947	Tmem106a	0610008L10Rik|AI043106|BC022145	transmembrane protein 106A	protein-coding
common_peak2-27161-37-58--0.356649977876023-0.602366141647657	chr3	30968147	30969533	+	0	NA	Intergenic	Intergenic	-25140	NM_011386	20482	Mm.15406	NM_011386	ENSMUSG00000027660	Skil	Skir|SnoN|sno	SKI-like	protein-coding
common_peak2-19959-28-25-0.352519401680371-0.541406350295756	chr1	132417380	132418253	+	0	NA	Intergenic	Intergenic	-58499	NM_010016	13136	Mm.101591	NM_010016	ENSMUSG00000026399	Cd55	Daf|Daf-GPI|Daf1|GPI-DAF	CD55 antigen	protein-coding
unique_peak1-5870-10-6-0.549060422951165-1.21398586181642	chr6	86028687	86029303	+	0	NA	intron (NM_001271859, intron 1 of 15)	intron (NM_001271859, intron 1 of 15)	953	NM_001271859	11519	Mm.104155	NM_013458		Add2	2900072M03Rik|add97	adducin 2 (beta)	protein-coding
unique_peak2-39032-12-8-0.478850983645327-0.562038191119709	chr8	64733197	64733628	+	0	NA	Intergenic	Intergenic	-131422	NM_011922	26359	Mm.42179	NM_011922	ENSMUSG00000031635	Anxa10	-	annexin A10	protein-coding
unique_peak2-33022-5-6--0.511735258063458-0.947717972411649	chr10	68167097	68167514	+	0	NA	Intergenic	Intergenic	-19189	NM_177794	327766	Mm.2479	NM_177794	ENSMUSG00000060044	Tmem26	3230401A06|AI195372	transmembrane protein 26	protein-coding
unique_peak1-4827-8-0-3.00522241794757-2.70926996097583	chr3	145478286	145478757	+	0	NA	intron (NM_026993, intron 1 of 5)	intron (NM_026993, intron 1 of 5)	56865	NM_026993	69219	Mm.234247	NM_026993	ENSMUSG00000028194	Ddah1	2410006N07Rik|2510015N06Rik|AI987801|AW050362	dimethylarginine dimethylaminohydrolase 1	protein-coding
common_peak1-18935-20-8-1.31814978314888-1.77631109801764	chr9	45850522	45851308	+	0	NA	intron (NM_027498, intron 1 of 24)	AT_rich|Low_complexity|Low_complexity	30012	NM_027498	70661	Mm.219459	NM_027498	ENSMUSG00000034135	Sik3	5730525O22Rik|9030204A07Rik|AI447252|AI846254|AI849445|Qsk|SIK-3|mKIAA0999	SIK family kinase 3	protein-coding
common_peak2-30950-35-51--0.269069459678588-0.449053920623485	chr8	45579489	45581277	+	0	NA	Intergenic	Intergenic	-455179	NM_001081286	14107	Mm.27365	NM_001081286	ENSMUSG00000070047	Fat1	2310038E12Rik|AU023433|Fath|mFat1	FAT tumor suppressor homolog 1 (Drosophila)	protein-coding
common_peak2-26571-38-47--0.0135098414226258-0.303315798308572	chr2	104027617	104028608	+	0	NA	intron (NM_001033347, intron 16 of 20)	Lx5|LINE|L1	65186	NM_026634	68243	Mm.158191	NM_026634	ENSMUSG00000032671	A930018P22Rik	-	RIKEN cDNA A930018P22 gene	protein-coding
common_peak2-28242-29-24-0.468433890840386-0.748982406290548	chr4	123572394	123573606	+	0	NA	Intergenic	Intergenic	-9256	NM_019660	56309	Mm.446553	NM_019660	ENSMUSG00000028647	Mycbp	5730488M09Rik|AW552132|AW742590|Amy-1	c-myc binding protein	protein-coding
common_peak1-16088-48-60-0.0401898136719279-0.316920393882012	chr5	64578952	64580807	+	0	NA	intron (NM_019636, intron 2 of 19)	intron (NM_019636, intron 2 of 19)	28380	NM_019636	57915	Mm.286353	NM_019636	ENSMUSG00000029174	Tbc1d1	1110062G02Rik|AI385682|AW555803|Tbc1|mKIAA1108	TBC1 domain family, member 1	protein-coding
common_peak1-17359-12-29--1.25811461052088-1.65862513589797	chr7	28802881	28803566	+	0	NA	Intergenic	L1_Rod|LINE|L1	-4089	NM_001254951	100043772	Mm.129275	NM_001100456		Zfp850	C130069I09Rik|Gm4636	zinc finger protein 850	protein-coding
common_peak1-9971-79-33-1.74137232592628-10.5549042186155	chr12	116268663	116271658	+	0	NA	Intergenic	Lx5|LINE|L1	-518255	NR_106063	102465664		NR_106063	miRBase:MI0022945	Mir7094-2	mmu-mir-7094-2	microRNA mir-7094-2	ncRNA
unique_peak1-7356-12-1-2.64877598508764-3.36932189928148	chrX	19079161	19079827	+	0	NA	Intergenic	Lx8|LINE|L1	-355397	NR_029807	723828		NR_029807	miRBase:MI0000710	Mir222	Mirn222|mmu-mir-222	microRNA 222	ncRNA
common_peak1-14088-25-19-0.539921810457743-0.756750750680359	chr2	122368160	122369139	+	0	NA	Intergenic	B3A|SINE|B2	57972	NM_001085518	381417	Mm.482295	NM_001085518	ENSMUSG00000079071	Gm14085	OTTMUSG00000015615	predicted gene 14085	protein-coding
common_peak1-18689-15-11-0.4272022498345-0.503257505534083	chr8	120493290	120493950	+	0	NA	Intergenic	(TCTA)n|Simple_repeat|Simple_repeat	-167791	NM_026758	68533	Mm.181836	NM_026758	ENSMUSG00000031843	Mphosph6	1110001M01Rik|AA536809|C86426	M phase phosphoprotein 6	protein-coding
common_peak2-25133-15-14-0.105274154947137-0.330004445983672	chr18	40218889	40219290	+	0	NA	Intergenic	Intergenic	159964	NM_023311	67180	Mm.270382	NM_023311	ENSMUSG00000024487	Yipf5	2610311I19Rik|AA408236|Yip1a	Yip1 domain family, member 5	protein-coding
common_peak2-32295-25-29--0.0450406902634128-0.301029995663982	chrX	38189512	38190319	+	0	NA	Intergenic	L1Md_T|LINE|L1	-564563	NM_016886	53623	Mm.327681	NM_016886	ENSMUSG00000001986	Gria3	2900064I19Rik|GluA3|GluR-C|GluR-K3|Glur-3|Glur3|Gluralpha3	glutamate receptor, ionotropic, AMPA3 (alpha 3)	protein-coding
common_peak2-26714-15-14-0.105274154947137-0.330004445983672	chr2	129129152	129129589	+	0	NA	intron (NM_010554, intron 5 of 6)	intron (NM_010554, intron 5 of 6)	6264	NR_040371	100503468	Mm.446943	NR_040371	ENSMUSG00000085498	Gm14023	OTTMUSG00000015408	predicted gene 14023	ncRNA
common_peak2-25907-17-9-0.896368243317676-1.09394599973099	chr19	46056585	46057089	+	0	NA	intron (NM_198296, intron 1 of 25)	B3|SINE|B2	16141	NM_198296	71617	Mm.210949	NM_198296	ENSMUSG00000039901	9130011E15Rik	AI431055|AW050122	RIKEN cDNA 9130011E15 gene	protein-coding
common_peak1-10832-36-48--0.135388757947454-0.322047890816902	chr14	101842959	101844318	+	0	NA	3' UTR (NM_001081278, exon 19 of 19)	3' UTR (NM_001081278, exon 19 of 19)	164770	NM_001081278	210789	Mm.320639	NM_173380	ENSMUSG00000033083	Tbc1d4	5930406J04Rik|A930035N22|AV295684|As160	TBC1 domain family, member 4	protein-coding
common_peak2-23696-13-10-0.319040412000471-0.446472590016315	chr15	88838129	88838622	+	0	NA	intron (NM_031260, intron 13 of 26)	intron (NM_031260, intron 13 of 26)	24951	NM_031260	83456	Mm.358791	NM_031260	ENSMUSG00000015365	Mov10l1	CHAMP|Csm	Moloney leukemia virus 10-like 1	protein-coding
unique_peak2-36051-9-9--0.132314688483142-1.03275496310833	chr19	46599401	46599806	+	0	NA	Intergenic	Intergenic	23465	NM_053100	93679	Mm.392177	NM_053100	ENSMUSG00000025034	Trim8	AA408830|BB006755|GERP|Rnf27	tripartite motif-containing 8	protein-coding
common_peak2-24679-29-32-0.0678959612566574-0.330208782692001	chr17	42875877	42876670	+	0	NA	intron (NM_001033493, intron 1 of 5)	B3|SINE|B2	2855	NM_001033493	435529	Mm.136350	NM_001033493	ENSMUSG00000057899	Gpr111	PGR20	G protein-coupled receptor 111	protein-coding
unique_peak2-39161-4-9--1.34538860874061-1.36011389749466	chr8	91486074	91486483	+	0	NA	Intergenic	ID|SINE|ID	-62356	NR_106190	102465899		NR_106190	miRBase:MI0026042	Mir8110	mmu-mir-8110	microRNA mir-8110	ncRNA
common_peak1-14258-14-13-0.0918612383000403-0.332077462497413	chr2	155592175	155592849	+	0	NA	Intergenic	B1F1|SINE|Alu	-8568	NM_010808	17391	Mm.330707	NM_010808	ENSMUSG00000027612	Mmp24	AU040325|MT5-MMP|MT5MMP|MTMMP5	matrix metallopeptidase 24	protein-coding
common_peak2-30951-33-31-0.331337562525529-0.549429090733244	chr8	61193909	61194869	+	0	NA	intron (NM_175032, intron 1 of 11)	intron (NM_175032, intron 1 of 11)	-14796	NM_001177534	100271928	Mm.484123	NM_001177534		Gm15881	OTTMUSG00000027193	predicted gene 15881	protein-coding
unique_peak1-2277-10-1-2.35641534500877-2.57096726280955	chr15	78865013	78865694	+	0	NA	intron (NM_001161712, intron 2 of 8)	intron (NM_001161712, intron 2 of 8)	4049	NM_001161712	26912	Mm.237085	NM_013847	ENSMUSG00000006378	Gcat	AI526977|Kbl	glycine C-acetyltransferase (2-amino-3-ketobutyrate-coenzyme A ligase)	protein-coding
common_peak2-31911-63-74-0.209493900574709-0.52921549434918	chr9	59690785	59693092	+	0	NA	intron (NM_173018, intron 16 of 43)	L1M4c|LINE|L1	92957	NM_173018	270163	Mm.249545	NM_173018	ENSMUSG00000039585	Myo9a	4732465J09Rik|C130068I12Rik|C230003M11	myosin IXa	protein-coding
common_peak2-21956-5-6--0.511735258063458-0.947717972411649	chr12	33147293	33147673	+	0	NA	Intergenic	L1_Mm|LINE|L1	83829	NM_001162903	72123	Mm.341352	NM_028111	ENSMUSG00000090946	Ccdc71l	2010109K11Rik|AV375874	coiled-coil domain containing 71 like	protein-coding
unique_peak2-36397-3-5--0.998945590680433-0.96108193396963	chr2	122164056	122164483	+	0	NA	intron (NM_001099297, intron 25 of 32)	intron (NM_001099297, intron 25 of 32)	22861	NM_001099297	99439	Mm.108582	NM_001099297	ENSMUSG00000033268	Duox1	9930101G15Rik|AW987690|Duox2|LNOX1|LNOX2|NOXEF1|NOXEF2|P138-TOX|THOX1|THOX2	dual oxidase 1	protein-coding
unique_peak2-35303-4-4--0.345388608740609-0.864171920961574	chr17	12759622	12760041	+	0	NA	Intergenic	ETnERV-int|LTR|ERVK	-17224	NM_013667	20518	Mm.17322	NM_013667	ENSMUSG00000040966	Slc22a2	Oct2|Orct2	solute carrier family 22 (organic cation transporter), member 2	protein-coding
unique_peak2-34460-4-9--1.34538860874061-1.36011389749466	chr14	26533204	26533691	+	0	NA	3' UTR (NM_001101433, exon 4 of 4)	3' UTR (NM_001101433, exon 4 of 4)	-12679	NR_028021	68173	Mm.444727	NM_026595		Ppifos	4930520F12Rik|Ppifs	peptidylprolyl isomerase F, opposite strand	ncRNA
common_peak2-32340-7-8--0.370834171144123-1.00793137938329	chrX	75137300	75137789	+	0	NA	Intergenic	L1_Mus2|LINE|L1	27447	NM_001085544	628923	Mm.79600	NM_001085544	ENSMUSG00000079522	Gm14744	OTTMUSG00000017866|Obp1f	predicted gene 14744	protein-coding
common_peak2-22954-10-14--0.550475250599749-0.446472590016315	chr14	51984684	51985300	+	0	NA	Intergenic	Intergenic	-19828	NR_045736	75377	Mm.402100	NR_045736		4930597G03Rik	-	RIKEN cDNA 4930597G03 gene	ncRNA
common_peak2-21033-14-15--0.100783839642355-0.301029995663982	chr11	33162358	33163064	+	0	NA	intron (NR_110973, intron 25 of 28)	intron (NR_110973, intron 25 of 28)	-59123	NM_019916	27140	Mm.25362	NM_019916	ENSMUSG00000040610	Tlx3	Hox11l2|Rnx|Tlx1l2	T cell leukemia, homeobox 3	protein-coding
unique_peak2-38191-3-9--1.73591118484664-1.57096726280955	chr6	98955500	98955826	+	0	NA	intron (NM_053202, intron 8 of 18)	intron (NM_053202, intron 8 of 18)	22629	NM_001197322	108655	Mm.234965	NM_053202	ENSMUSG00000030067	Foxp1	3110052D19Rik|4932443N09Rik|AI461938|AW494214	forkhead box P1	protein-coding
common_peak2-27139-16-11-0.533301141546906-0.58239619684445	chr3	27689803	27690355	+	0	NA	Intergenic	Intergenic	-80718	NM_173182	72007	Mm.38832	NM_173182	ENSMUSG00000039286	Fndc3b	1600019O04Rik|AW550168|Fad104|mKIAA4164	fibronectin type III domain containing 3B	protein-coding
common_peak1-16915-223-273-0.532735628707108-5.23972057682298	chr6	72898333	72900751	+	0	NA	Intergenic	ID_B1|SINE|B4	8684	NM_001039392	19240	Mm.3532	NM_025284	ENSMUSG00000079523	Tmsb10	Ptmb10|Tb10	thymosin, beta 10	protein-coding
common_peak2-27619-25-48--0.752859938770102-1.32967515660734	chr3	104817661	104818603	+	0	NA	intron (NM_001163332, intron 3 of 5)	intron (NM_001163332, intron 3 of 5)	37739	NM_001163333	80281	Mm.200327	NM_030249	ENSMUSG00000062127	Cttnbp2nl	AA552995|AA589392|AU018624|BC003236|mKIAA1433	CTTNBP2 N-terminal like	protein-coding
common_peak2-30813-26-14-1.02100849654994-1.59386218057211	chr7	128297726	128298348	+	0	NA	intron (NM_139310, intron 24 of 28)	MLT1K|LTR|MaLR	71085	NM_139310	246190	Mm.221073	NM_139310	ENSMUSG00000034990	Otoa	-	otoancorin	protein-coding
common_peak2-19845-8-7-0.00522241794757061-1.00793137938329	chr1	91043233	91043631	+	0	NA	intron (NM_133816, intron 4 of 5)	intron (NM_133816, intron 4 of 5)	46695	NR_106129	102465771		NR_106129		Mir7669	mmu-mir-7669	microRNA mir-7669	ncRNA
unique_peak2-36288-1-6--2.43441193227435-1.56314192529759	chr2	69669919	69670368	+	0	NA	intron (NM_177784, intron 3 of 3)	B3|SINE|B2	9716	NM_177784	277396	Mm.138073	NM_177784	ENSMUSG00000042155	Klhl23	C130068N17Rik	kelch-like 23	protein-coding
common_peak2-23965-10-13--0.450939577048835-0.386243247519795	chr16	16896663	16897313	+	0	NA	intron (NM_176833, intron 1 of 7)	intron (NM_176833, intron 1 of 7)	426	NM_176833	68606	Mm.230296	NM_176833	ENSMUSG00000026181	Ppm1f	1110021B16Rik|4933427B07Rik|CaMKPase|Popx2|mKIAA0015	protein phosphatase 1F (PP2C domain containing)	protein-coding
unique_peak1-285-10-0-3.35641534500877-3.31132995230379	chr1	114164817	114165479	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-403653	NM_001081316	319901	Mm.103468	NM_001081316	ENSMUSG00000038702	Dsel	9330132E09Rik	dermatan sulfate epimerase-like	protein-coding
unique_peak2-35935-11-9-0.186765489364251-0.344532117358383	chr19	8785967	8786541	+	0	NA	intron (NM_001161413, intron 4 of 9)	intron (NM_001161413, intron 4 of 9)	2133	NM_008577	17254	Mm.4114	NM_008577	ENSMUSG00000010095	Slc3a2	4F2|4F2HC|AI314110|Cd98|Ly-10|Ly-m10|Ly10|Mdu1|Mgp-2hc|NACAE	solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2	protein-coding
unique_peak2-35959-1-10--3.08648862885404-2.57096726280955	chr19	16386814	16387248	+	0	NA	intron (NM_008139, intron 2 of 6)	intron (NM_008139, intron 2 of 6)	2463	NR_105832	102465218		NR_105832	miRBase:MI0021942	Mir496b	mmu-mir-496b	microRNA mir-496b	ncRNA
common_peak2-23076-12-22--0.874785970969374-0.809260849721102	chr14	74732387	74733076	+	0	NA	Intergenic	B4A|SINE|B4	-22603	NR_046059	74425	Mm.399498	NR_046059		4933402J15Rik	-	RIKEN cDNA 4933402J15 gene	ncRNA
common_peak1-7890-26-13-1.12054417010086-1.80107744087171	chr1	134771431	134772367	+	0	NA	Intergenic	ID_B1|SINE|B4	-5033	NM_010732	16980	Mm.39640	NM_010732	ENSMUSG00000026443	Lrrn2	5730406J09Rik|NLRR-2	leucine rich repeat protein 2, neuronal	protein-coding
unique_peak2-37775-4-19--2.34538860874061-2.60953805094651	chr5	115732153	115732635	+	0	NA	intron (NM_026504, intron 1 of 6)	intron (NM_026504, intron 1 of 6)	2683	NM_026504	52064	Mm.290142	NM_026504	ENSMUSG00000041733	Coq5	1810014G04Rik|D5Ertd33e	coenzyme Q5 homolog, methyltransferase (yeast)	protein-coding
unique_peak2-38404-7-13--1.00826409175941-0.697979855752659	chr7	19816945	19817522	+	0	NA	intron (NM_207525, intron 1 of 1)	intron (NM_207525, intron 1 of 1)	3495	NM_207525	403187	Mm.239583	NM_207525		Opa3	D630048P19Rik|Gm1425|Gm472	optic atrophy 3	protein-coding
common_peak2-22205-40-42-0.232710928049-0.490454554604827	chr12	111537183	111537965	+	0	NA	Intergenic	MTE2b|LTR|MaLR	20134	NM_172119	107585	Mm.154427	NM_172119	ENSMUSG00000075707	Dio3	-	deiodinase, iodothyronine type III	protein-coding
unique_peak2-33044-7-12--0.901348887842903-1.31827279259406	chr10	75060417	75061052	+	0	NA	intron (NM_011820, intron 1 of 11)	RLTR13C1|LTR|ERVK	8608	NM_011820	23887	Mm.257927	NM_011820	ENSMUSG00000006344	Ggt5	AI551243|GGL|GGT-REL|Ggtla1	gamma-glutamyltransferase 5	protein-coding
common_peak2-27672-68-110--0.22445508705181-0.53957546019573	chr3	113629763	113630835	+	0	NA	Intergenic	L1Md_T|LINE|L1	-103159	NM_007729	12814	Mm.209715	NM_007729	ENSMUSG00000027966	Col11a1	C530001D20Rik|cho	collagen, type XI, alpha 1	protein-coding
common_peak2-29830-9-5-0.604650905683064-1.21398586181642	chr6	93260792	93261227	+	0	NA	Intergenic	Intergenic	370433	NR_015530	330385	Mm.483472	NR_015530	ENSMUSG00000097462	9530026P05Rik	B430306B02	RIKEN cDNA 9530026P05 gene	ncRNA
common_peak2-29489-13-23--0.806490470083387-0.781208772652439	chr6	31216331	31216983	+	0	NA	intron (NR_040257, intron 2 of 7)	intron (NR_040257, intron 2 of 7)	46306	NR_040261	73652	Mm.441297	NR_040257	ENSMUSG00000087380	2210408F21Rik	-	RIKEN cDNA 2210408F21 gene	ncRNA
unique_peak2-39649-2-4--1.23938235115068-0.931118710592187	chr9	106367339	106367703	+	0	NA	exon (NM_001159652, exon 1 of 1)	exon (NM_001159652, exon 1 of 1)	750	NM_001159652	436090	Mm.482905	NM_001159652	ENSMUSG00000091735	Gpr62	4933402E03Rik	G protein-coupled receptor 62	protein-coding
common_peak1-9168-20-25--0.212364933549899-0.342639663781856	chr11	78174169	78175070	+	0	NA	exon (NM_001277290, exon 8 of 9)	exon (NM_001277290, exon 8 of 9)	17595	NM_011676	22248	Mm.284811	NM_011676	ENSMUSG00000002058	Unc119	D11Bhm52|HRG4|MRG4|Rg4|Rtg4|Unc119h	unc-119 homolog (C. elegans)	protein-coding
unique_peak1-4785-11-0-3.50869358425161-3.61235994796777	chr3	130864532	130865064	+	0	NA	intron (NM_001276402, intron 3 of 9)	intron (NM_001276402, intron 3 of 9)	49089	NM_001276403	16842	Mm.255219	NM_010703	ENSMUSG00000027985	Lef1	3000002B05|AI451430|Lef-1	lymphoid enhancer binding factor 1	protein-coding
unique_peak2-34003-3-8--1.58390809140159-1.39487600375387	chr12	99638561	99638975	+	0	NA	Intergenic	Intergenic	131923	NM_008152	14744	Mm.378924	NM_008152	ENSMUSG00000021886	Gpr65	Dig1|Gpcr25|TDAG8	G-protein coupled receptor 65	protein-coding
common_peak1-16238-12-11-0.0638134843664826-0.337263207250336	chr5	103738348	103738883	+	0	NA	Intergenic	Intergenic	-10567	NR_040699	74624	Mm.389662	NR_040699		4930429D17Rik	-	RIKEN cDNA 4930429D17 gene	ncRNA
common_peak2-23640-14-29--1.00767443525087-1.28534286439185	chr15	83563429	83564357	+	0	NA	Intergenic	MTB|LTR|MaLR	-8424	NM_022723	64706	Mm.40393	NM_022723	ENSMUSG00000016763	Scube1	7330410C13Rik|A630023E24Rik	signal peptide, CUB domain, EGF-like 1	protein-coding
unique_peak2-34562-4-5--0.608423014574403-0.909929411522249	chr14	65875043	65875369	+	0	NA	intron (NM_021458, intron 1 of 6)	intron (NM_021458, intron 1 of 6)	6094	NM_021458	14365	Mm.214687	NM_021458		Fzd3	AU020229|D930050A07Rik|Fz3	frizzled homolog 3 (Drosophila)	protein-coding
common_peak2-25935-3-9--1.73591118484664-1.57096726280955	chr19	46968296	46968862	+	0	NA	intron (NM_029810, intron 10 of 17)	B2_Mm2|SINE|B2	68262	NM_029810	76952	Mm.40965	NM_029810	ENSMUSG00000025041	Nt5c2	2010002I23Rik|CnII|ENSMUSG00000025039|Gm9751|Gmp|Nt5b|Pnt5|cN-II	5'-nucleotidase, cytosolic II	protein-coding
common_peak1-7676-33-31-0.331337562525529-0.549429090733244	chr1	77461385	77462682	+	0	NA	intron (NM_007936, intron 3 of 17)	intron (NM_007936, intron 3 of 17)	31310	NR_105770	102465180		NR_105770		Mir6352	mmu-mir-6352	microRNA mir-6352	ncRNA
common_peak2-27174-31-29-0.318348075204605-0.512115693271959	chr3	32736824	32737706	+	0	NA	intron (NM_001013024, intron 2 of 20)	B1_Mm|SINE|Alu	20717	NM_001013024	72607	Mm.316153	NM_001013024		Usp13	2700071E21Rik|AI848077|ISOT3|IsoT-3	ubiquitin specific peptidase 13 (isopeptidase T-3)	protein-coding
unique_peak1-4499-8-0-3.00522241794757-2.70926996097583	chr3	10173383	10173980	+	0	NA	Intergenic	B2_Mm2|SINE|B2	10204	NM_001030305	18857	Mm.371777	NM_001030305	ENSMUSG00000052468	Pmp2	P2	peripheral myelin protein 2	protein-coding
common_peak2-25178-13-8-0.608547029195456-0.660903317613904	chr18	55087204	55087645	+	0	NA	intron (NM_175751, intron 3 of 9)	intron (NM_175751, intron 3 of 9)	62410	NM_175751	269023	Mm.192984	NM_175751	ENSMUSG00000052713	Zfp608	4932417D18Rik|D430007A19Rik|Znf608	zinc finger protein 608	protein-coding
common_peak1-12154-11-5-0.923731083530457-1.477227296591	chr17	28510403	28510938	+	0	NA	Intergenic	B1_Mur4|SINE|Alu	-8582	NM_021478	22157	Mm.42102	NM_021478	ENSMUSG00000037446	Tulp1	Tulp1l	tubby like protein 1	protein-coding
common_peak1-18585-14-42--1.52704859434445-3.19271205772593	chr8	106210384	106210980	+	0	NA	Intergenic	Intergenic	82983	NR_045730	71058	Mm.67707	NR_045730		4933400L20Rik	-	RIKEN cDNA 4933400L20 gene	ncRNA
unique_peak1-3997-9-3-1.18961340640422-1.57096726280955	chr2	35338507	35338936	+	0	NA	Intergenic	Intergenic	-21776	NM_001145821	14594	Mm.281124	NM_010283	ENSMUSG00000035778	Ggta1	AW108479|GALT|Gal|Ggta|Ggta-1|alpha3GalT	glycoprotein galactosyltransferase alpha 1, 3	protein-coding
common_peak2-24568-27-38--0.293856267967013-0.412842868820461	chr17	29440284	29440965	+	0	NA	TTS (NM_030561)	TTS (NM_030561)	-15203	NM_023734	74116	Mm.30950	NM_023734	ENSMUSG00000024011	Pi16	1200009H11Rik|Cripi|PI-16	peptidase inhibitor 16	protein-coding
common_peak2-24914-25-17-0.691924903902794-0.98872314135509	chr17	85162560	85163350	+	0	NA	intron (NM_028233, intron 13 of 37)	intron (NM_028233, intron 13 of 37)	27171	NM_028233	72416	Mm.217027	NM_028233	ENSMUSG00000024120	Lrpprc	3110001K13Rik|C76645|Gp130|Lrp130|Lsfc	leucine-rich PPR-motif containing	protein-coding
common_peak1-17422-10-11--0.228547155712387-0.31137425193576	chr7	12818439	12818949	+	0	NA	Intergenic	L1_Mus1|LINE|L1	12029	NR_046074	100043092	Mm.367420	NR_046074		Gm4224	-	predicted gene 4224	ncRNA
common_peak2-22112-33-43--0.128094056111768-0.324581211600972	chr12	81859924	81860962	+	0	NA	exon (NM_001008423, exon 2 of 2)	exon (NM_001008423, exon 2 of 2)	1259	NM_001008423	380768	Mm.29367	NM_001008423		Ccdc177	Gm1568	coiled-coil domain containing 177	protein-coding
common_peak1-14205-42-37-0.494401814423599-0.994719720785879	chr2	148856616	148858399	+	0	NA	Intergenic	RMER16-int|LTR|ERVK	-156303	NM_009976	13010	Mm.4263	NM_009976	ENSMUSG00000027447	Cst3	CysC	cystatin C	protein-coding
unique_peak2-38985-5-9--1.02630843089322-1.21398586181642	chr8	41238933	41239431	+	0	NA	Intergenic	Lx|LINE|L1	133125	NM_030610	80857	Mm.425526	NM_030610	ENSMUSG00000031603	Fgf20	-	fibroblast growth factor 20	protein-coding
common_peak2-23951-10-8-0.186490343566457-1.078512453669	chr16	14360922	14361294	+	0	NA	promoter-TSS (NM_008576)	promoter-TSS (NM_008576)	-543	NM_008576	17250	Mm.196634	NM_008576	ENSMUSG00000023088	Abcc1	Abcc1a|Abcc1b|MRP|Mdrap|Mrp1	ATP-binding cassette, sub-family C (CFTR/MRP), member 1	protein-coding
common_peak2-26763-10-5-0.771452844287613-1.33892459842472	chr2	140760673	140761097	+	0	NA	intron (NM_001013802, intron 4 of 18)	intron (NM_001013802, intron 4 of 18)	-263673	NM_178382	71436	Mm.426781	NM_178382	ENSMUSG00000051379	Flrt3	5530600M07Rik|C430047I10Rik|mKIAA1469	fibronectin leucine rich transmembrane protein 3	protein-coding
common_peak1-18730-34-38-0.0966663081390173-0.344477557577616	chr8	123477515	123478698	+	0	NA	Intergenic	Intergenic	128826	NR_045471	68790	Mm.246916	NR_045471	ENSMUSG00000097336	Fendrr	1110050K14Rik|linc-Foxf1a	Foxf1 adjacent non-coding developmental regulatory RNA	ncRNA
common_peak1-19181-17-23--0.366666162516118-0.383878263347744	chr9	98563519	98564313	+	0	NA	Intergenic	Intergenic	-61818	NM_025485	64655	Mm.17949	NM_025485	ENSMUSG00000032459	Mrps22	3100002P07Rik|Rpms22	mitochondrial ribosomal protein S22	protein-coding
common_peak1-11940-23-34--0.407515512435886-0.533344939162177	chr17	3326484	3327372	+	0	NA	intron (NM_001122998, intron 1 of 26)	CpG	355	NM_001122998	24001	Mm.137134	NM_011878	ENSMUSG00000023800	Tiam2	3000002F19Rik|STEF|mKIAA2016	T cell lymphoma invasion and metastasis 2	protein-coding
common_peak1-13682-13-11-0.193509529916613-0.379391706698377	chr2	29627631	29628291	+	0	NA	Intergenic	Intergenic	10913	NM_001177392	433416	Mm.330112	NM_001034887	ENSMUSG00000075425	Gm13547	OTTMUSG00000012686	predicted gene 13547	protein-coding
common_peak2-30216-79-119--0.0780554284318988-0.324330844378284	chr7	130645422	130647643	+	0	NA	Intergenic	L1MC5|LINE|L1	-2569	NM_001081329	210162	Mm.135397	NM_175435	ENSMUSG00000030757	Zkscan2	9430065N20Rik|AW493225|Zfp694	zinc finger with KRAB and SCAN domains 2	protein-coding
unique_peak2-35811-5-12--1.40482005414695-1.62698961692433	chr18	62203561	62204236	+	0	NA	Intergenic	L2b|LINE|L2	91169	NM_172628	225608	Mm.262320	NM_172628	ENSMUSG00000045629	Sh3tc2	D430044G18Rik	SH3 domain and tetratricopeptide repeats 2	protein-coding
common_peak2-29111-10-22--1.16714661104824-1.30248952876293	chr5	123135685	123136647	+	0	NA	intron (NM_001038845, intron 12 of 12)	intron (NM_001038845, intron 12 of 12)	-21400	NM_011026	18438	Mm.290884	NM_011026	ENSMUSG00000029470	P2rx4	AI504491|AW555605|D5Ertd444e|P2X4	purinergic receptor P2X, ligand-gated ion channel 4	protein-coding
unique_peak2-32710-1-6--2.43441193227435-1.56314192529759	chr1	153386430	153386865	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-31856	NM_022018	63913	Mm.157700	NM_022018		Fam129a	AI256368|AU019833|Niban	family with sequence similarity 129, member A	protein-coding
unique_peak2-37814-7-7--0.200909169701811-0.97990265578305	chr5	124353269	124353693	+	0	NA	Intergenic	CT-rich|Low_complexity|Low_complexity	-3803	NM_026603	68184	Mm.28549	NM_026603	ENSMUSG00000023106	Denr	1500003K04Rik	density-regulated protein	protein-coding
unique_peak2-34328-4-7--1.02346051385325-1.09384600808989	chr13	97512143	97512529	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-71445	NM_008255	15357	Mm.316652	NM_008255	ENSMUSG00000021670	Hmgcr	HMG-CoAR|Red	3-hydroxy-3-methylglutaryl-Coenzyme A reductase	protein-coding
common_peak1-15457-21-31--0.430510734733764-0.49501414494053	chr4	99120246	99121547	+	0	NA	Intergenic	MTD|LTR|MaLR	-202094	NM_010425	15221	Mm.4758	NM_010425	ENSMUSG00000067261	Foxd3	CWH3|Genesis|Hfh2	forkhead box D3	protein-coding
unique_peak2-39851-6-18--1.68252940306328-1.66449268468235	chrX	70385851	70386470	+	0	NA	intron (NM_001025383, intron 3 of 3).2	(TG)n|Simple_repeat|Simple_repeat	2603	NM_001025383	574404	Mm.481740	NM_001025383	ENSMUSG00000067771	Gm14685	-	predicted gene 14685	protein-coding
common_peak2-25468-70-61-0.665770605988524-2.1879318928065	chr19	4396322	4397334	+	0	NA	5' UTR (NM_001001984, exon 1 of 21)	5' UTR (NM_001001984, exon 1 of 21)	249	NM_001001984	225876	Mm.31941	NM_001001984	ENSMUSG00000054611	Kdm2a	100043628|5530401A10Rik|AA589516|AW536790|Cxxc8|Fbl11|Fbl7|Fbxl11|Gm4560|Jhdm1|Jhdm1a|lalina	lysine (K)-specific demethylase 2A	protein-coding
unique_peak2-33506-1-5--2.2120195109379-1.32905871926422	chr11	73321378	73321780	+	0	NA	Intergenic	Intergenic	9120	NM_146443	258435	Mm.377500	NM_146443	ENSMUSG00000095312	Olfr382	MOR135-14	olfactory receptor 382	protein-coding
common_peak2-31546-21-49--1.07436692450849-2.19832861281706	chr8	111643459	111644047	+	0	NA	Intergenic	Intergenic	182993	NR_037295	100526511		NR_037295		Mir3108	mmu-mir-3108	microRNA 3108	ncRNA
unique_peak1-5215-10-3-1.35641534500877-1.75805390616669	chr5	36211588	36212126	+	0	NA	intron (NM_177678, intron 16 of 19)	intron (NM_177678, intron 16 of 19)	-24111	NM_027373	70292	Mm.125167	NM_027373	ENSMUSG00000029094	Afap1	2600003E23Rik|9630044L16Rik|AI848729|Afap|mKIAA3018	actin filament associated protein 1	protein-coding
common_peak1-8315-35-43--0.0280613601747932-0.301029995663985	chr10	41565000	41566056	+	0	NA	intron (NM_001162908, intron 1 of 9)	IAPEz-int|LTR|ERVK	35148	NM_001162908	140742	Mm.139418	NM_001013370	ENSMUSG00000038332	Sesn1	1110002G11Rik|AU044290|Pa26|Sest1	sestrin 1	protein-coding
unique_peak2-37444-8-18--1.24270509549601-1.15812782348128	chr4	155249873	155250638	+	0	NA	intron (NM_028020, intron 4 of 16)	B2_Mm2|SINE|B2	6579	NM_028020	71957	Mm.475640	NM_028020	ENSMUSG00000029034	Cpsf3l	2410006F12Rik|AU044035	cleavage and polyadenylation specific factor 3-like	protein-coding
unique_peak2-38139-1-7--2.62705701021674-1.80617997398389	chr6	84587446	84587891	+	0	NA	intron (NM_177077, intron 20 of 21)	intron (NM_177077, intron 20 of 21)	-43766	NM_001177713	232174	Mm.255246	NM_175475	ENSMUSG00000063415	Cyp26b1	CP26|P450RAI-2	cytochrome P450, family 26, subfamily b, polypeptide 1	protein-coding
unique_peak2-37606-8-5-0.420259917226415-1.10484139239135	chr5	63812458	63812820	+	0	NA	Intergenic	Intergenic	-227703	NM_177006	319807	Mm.319487	NM_028470	ENSMUSG00000090061	Nwd2	3110047P20Rik|B830017A01Rik|Hn1-ps2|mKIAA1239	NACHT and WD repeat domain containing 2	protein-coding
common_peak2-23923-30-43--0.289756209145424-0.435893058718175	chr16	10785671	10786458	+	0	NA	promoter-TSS (NM_001271603)	promoter-TSS (NM_001271603)	-435	NM_001271603	12703	Mm.130	NM_009896	ENSMUSG00000038037	Socs1	Cish1|Cish7|JAB|SOCS-1|SSI-1	suppressor of cytokine signaling 1	protein-coding
common_peak2-24009-13-7-0.778472030637769-0.817533494790411	chr16	21256136	21256645	+	0	NA	promoter-TSS (NR_106145)	promoter-TSS (NR_106145)	-251	NR_106145	102465781		NR_106145	miRBase:MI0025025	Mir7680	mmu-mir-7680	microRNA mir-7680	ncRNA
common_peak2-21126-11-12--0.191746133889479-0.310474156842889	chr11	54004533	54005084	+	0	NA	intron (NR_045506, intron 2 of 2)	ORR1A4|LTR|MaLR	21982	NR_045506	71056	Mm.56332	NR_045506	ENSMUSG00000086209	4933405E24Rik	-	RIKEN cDNA 4933405E24 gene	ncRNA
common_peak2-30457-9-7-0.18961340640422-1.05908390183068	chr7	45601267	45601675	+	0	NA	Intergenic	Intergenic	918433	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak2-39974-1-6--2.43441193227435-1.56314192529759	chrX	151800851	151801139	+	0	NA	Intergenic	Lx8|LINE|L1	-27998	NM_016764	53381	Mm.247542	NM_016764	ENSMUSG00000025289	Prdx4	AOE372|Prx-iv|Prx4|TRANK	peroxiredoxin 4	protein-coding
unique_peak2-34803-4-6--0.830815435910851-0.989110657569874	chr15	72970209	72970514	+	0	NA	intron (NM_153178, intron 2 of 18)	intron (NM_153178, intron 2 of 18)	45016	NM_153178	239528	Mm.23095	NM_153178		Ago2	1110029L17Rik|2310051F07Rik|AI225898|AL022874|AW546247|ENSMUSG00000072493|Eif2c2|Gerp95|Gm10365|mKIAA4215	argonaute RISC catalytic subunit 2	protein-coding
unique_peak2-32528-1-8--2.79698201165906-2.05605744720049	chr1	62736580	62737138	+	0	NA	Intergenic	Intergenic	-13032	NM_001077406	18187	Mm.266341	NM_010939	ENSMUSG00000025969	Nrp2	1110048P06Rik|Np-2|Np2|Npn-2|Npn2	neuropilin 2	protein-coding
common_peak2-29127-23-47--0.863194996212076-1.63155726056134	chr5	124248990	124250286	+	0	NA	intron (NM_001042421, intron 44 of 63)	IAPLTR3|LTR|ERVK	49903	NM_001042421	208628	Mm.441089	NM_001042421	ENSMUSG00000029414	Kntc1	D330012D13	kinetochore associated 1	protein-coding
common_peak1-10710-23-17-0.551842503066768-0.713114929964887	chr14	60317874	60318896	+	0	NA	intron (NM_015803, intron 32 of 35)	MLT1A|LTR|MaLR	74267	NM_145463	219134	Mm.275409	NM_145463	ENSMUSG00000044461	Shisa2	9430059P22Rik|MAd2|Tmem46|mShisa|shisa	shisa homolog 2 (Xenopus laevis)	protein-coding
common_peak1-9209-11-13--0.298661337805991-0.337263207250336	chr11	82870664	82871327	+	0	NA	Intergenic	Intergenic	-7619	NM_011408	20556	Mm.278689	NM_011408	ENSMUSG00000072620	Slfn2	Shlf2	schlafen 2	protein-coding
common_peak1-15958-36-48--0.135388757947454-0.322047890816902	chr5	31048091	31049306	+	0	NA	intron (NM_023047, intron 2 of 12)	intron (NM_023047, intron 2 of 12)	34430	NM_023047	65254	Mm.27732	NM_023047	ENSMUSG00000029168	Dpysl5	CRAM|CRMP-5|Crmp5	dihydropyrimidinase-like 5	protein-coding
unique_peak2-36098-2-8--2.08737925770563-1.65811743852845	chr19	61175427	61176046	+	0	NA	Intergenic	ORR1A0|LTR|MaLR	76476	NM_001177513	633057	Mm.426097	NM_001177513	ENSMUSG00000094649	Gm7102	EG633057	predicted gene 7102	protein-coding
common_peak1-8528-20-15-0.488074784591193-0.590343908676236	chr10	88146727	88147653	+	0	NA	Intergenic	Intergenic	-1422	NM_011461	20728	Mm.21642	NM_011461		Spic	AU019198|C76795|Prf|Spi-C	Spi-C transcription factor (Spi-1/PU.1 related)	protein-coding
unique_peak2-37625-2-7--1.91745425626332-1.45399745587252	chr5	66473517	66473974	+	0	NA	intron (NM_178446, intron 2 of 6)	intron (NM_178446, intron 2 of 6)	15673	NM_139065	245945	Mm.36863	NM_139065	ENSMUSG00000070780	Rbm47	9530077J19Rik	RNA binding motif protein 47	protein-coding
common_peak2-26532-74-65-0.671492457620154-2.36405720836327	chr2	91710067	91711813	+	0	NA	intron (NM_172669, intron 11 of 17)	intron (NM_172669, intron 11 of 17)	-51406	NM_007699	12672	Mm.330405	NM_007699	ENSMUSG00000040495	Chrm4	Chrm-4|M4	cholinergic receptor, muscarinic 4	protein-coding
common_peak1-7999-18-15-0.312919151228352-0.456667090758524	chr1	164135146	164135920	+	0	NA	intron (NM_172646, intron 14 of 19)	intron (NM_172646, intron 14 of 19)	-12221	NR_002870	474332	Mm.479755	NR_002870	ENSMUSG00000078190	Dnm3os	6030416H16Rik|Hag2|Npn1|P/L01	dynamin 3, opposite strand	ncRNA
common_peak2-23891-25-23-0.27688740462395-0.451698068655807	chr16	3743119	3744081	+	0	NA	promoter-TSS (NM_148924)	promoter-TSS (NM_148924)	-499	NM_148924	74120	Mm.29081	NM_148924	ENSMUSG00000022529	Zfp263	1200014J04Rik|AI326880|AU020888|NT2|mFPM315	zinc finger protein 263	protein-coding
common_peak1-14030-21-22-0.0459273092092225-0.319918318021793	chr2	116972350	116973119	+	0	NA	intron (NM_001277256, intron 1 of 4)	intron (NM_001277256, intron 1 of 4)	25927	NM_033524	114715	Mm.245890	NM_033524	ENSMUSG00000027351	Spred1	5730461F13Rik|AL024345|AW047647	sprouty protein with EVH-1 domain 1, related sequence	protein-coding
common_peak2-24862-8-5-0.420259917226415-1.10484139239135	chr17	78736821	78737234	+	0	NA	intron (NM_015800, intron 8 of 16)	L1Md_F2|LINE|L1	80465	NM_001285949	225020	Mm.236835	NM_199448	ENSMUSG00000056121	Fez2	9030616F16|D17Ertd315e	fasciculation and elongation protein zeta 2 (zygin II)	protein-coding
unique_peak1-5146-20-7-1.48807478459119-2.07034318903805	chr5	17437712	17438700	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	-30182	NM_001081143	242851	Mm.332230	NM_001081143	ENSMUSG00000028777	Gnat3	Ggust|Gtn	guanine nucleotide binding protein, alpha transducing 3	protein-coding
common_peak2-26723-39-25-0.915321528778062-2.02221055290443	chr2	131096126	131096859	+	0	NA	intron (NM_153501, intron 1 of 6)	B2_Mm2|SINE|B2	8256	NM_153501	74450	Mm.101264	NM_153501	ENSMUSG00000037514	Pank2	4933409I19Rik|AI642621	pantothenate kinase 2	protein-coding
common_peak2-26218-16-21--0.341167976369236-0.392630012299441	chr2	26639566	26640306	+	0	NA	Intergenic	Intergenic	80579	NM_030718	80908	Mm.160386	NM_030718	ENSMUSG00000015787	Abo	NAGAT	ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase, transferase B, alpha 1-3-galactosyltransferase)	protein-coding
common_peak1-16625-12-13--0.158578936969966-0.301029995663979	chr6	13909757	13910324	+	0	NA	Intergenic	L1Md_F2|LINE|L1	88471	NR_045995	76311	Mm.367129	NR_045995	ENSMUSG00000097616	1110019D14Rik	-	RIKEN cDNA 1110019D14 gene	ncRNA
unique_peak1-1151-10-2-1.77145284428761-2.09384600808989	chr11	98446989	98447730	+	0	NA	intron (NM_025661, intron 1 of 3)	intron (NM_025661, intron 1 of 3)	1200	NM_025661	66612	Mm.180546	NM_025661	ENSMUSG00000038150	Ormdl3	2810011N17Rik|AI315223	ORM1-like 3 (S. cerevisiae)	protein-coding
common_peak1-18918-19-30--0.551508983725189-0.647723624534446	chr9	44360888	44361693	+	0	NA	Intergenic	ERVL-E-int|LTR|ERVL	-26786	NM_007551	12145	Mm.6246	NM_007551	ENSMUSG00000047880	Cxcr5	Blr1|CXC-R5|CXCR-5|Gpcr6|MDR15	chemokine (C-X-C motif) receptor 5	protein-coding
unique_peak2-33336-2-5--1.50241675698448-1.08602067057793	chr11	20358031	20358457	+	0	NA	Intergenic	Intergenic	-85012	NM_021372	58172	Mm.339676	NM_021372	ENSMUSG00000049800	Sertad2	AB041541|AU021878|Kiaa0127|SEI-2|Sei2|TRIP-Br2|mKIAA0127	SERTA domain containing 2	protein-coding
common_peak2-31774-23-26--0.0331199976543877-0.301029995663988	chr9	22307098	22307724	+	0	NA	intron (NM_181316, intron 3 of 21)	intron (NM_181316, intron 3 of 21)	27252	NM_178415	319845	Mm.176725	NM_178415	ENSMUSG00000035919	Bbs9	E130103I17Rik	Bardet-Biedl syndrome 9 (human)	protein-coding
common_peak1-10180-45-53-0.105470523181403-0.349953584539098	chr13	41000401	41001792	+	0	NA	intron (NM_008105, intron 1 of 2)	intron (NM_008105, intron 1 of 2)	-11907	NM_133219	14538	Mm.314757	NM_008105	ENSMUSG00000021360	Gcnt2	5330430K10Rik|IGnT|IGnTA|IGnTB|IGnTC	glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	protein-coding
common_peak1-9057-10-11--0.228547155712387-0.31137425193576	chr11	68458150	68458638	+	0	NA	Intergenic	Intergenic	-47023	NM_175260	77579	Mm.218233	NM_175260	ENSMUSG00000020900	Myh10	5730504C04Rik|9330167F11Rik|Fltn|Myhn-2|Myhn2|NMHC II-B|NMHC-B|NMHCII-B|NMMHC II-b|NMMHC-B|NMMHC-IIB|SMemb|mKIAA3005	myosin, heavy polypeptide 10, non-muscle	protein-coding
common_peak1-9005-9-8-0.0196884049619079-1.03275496310833	chr11	60223220	60223708	+	0	NA	intron (NM_145427, intron 1 of 7)	intron (NM_145427, intron 1 of 7)	7137	NM_145427	246782	Mm.41651	NM_145427	ENSMUSG00000042709	Atpaf2	ATP12|ATP12p	ATP synthase mitochondrial F1 complex assembly factor 2	protein-coding
common_peak1-9558-95-137-0.0393908882458449-0.320488675402861	chr11	117567737	117569776	+	0	NA	intron (NM_198022, intron 3 of 21)	intron (NM_198022, intron 3 of 21)	53153	NM_198022	217351	Mm.40272	NM_198022	ENSMUSG00000025571	Tnrc6c	9930033H14Rik|mKIAA1582	trinucleotide repeat containing 6C	protein-coding
unique_peak1-935-10-3-1.35641534500877-1.75805390616669	chr11	53979734	53980312	+	0	NA	Intergenic	B3A|SINE|B2	46767	NR_045506	71056	Mm.56332	NR_045506	ENSMUSG00000086209	4933405E24Rik	-	RIKEN cDNA 4933405E24 gene	ncRNA
common_peak2-30648-6-11--1.01956439034085-1.32595962126035	chr7	98813260	98813872	+	0	NA	intron (NM_011807, intron 2 of 22)	L1M1|LINE|L1	-397338	NM_001243046	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
unique_peak2-37042-1-5--2.2120195109379-1.32905871926422	chr3	133088850	133089200	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	115951	NM_146141	74776	Mm.210305	NM_146141	ENSMUSG00000028013	Ppa2	1110013G13Rik|Sid6306	pyrophosphatase (inorganic) 2	protein-coding
unique_peak1-6961-12-4-1.32684789020028-2.04196296489515	chr8	114765136	114765796	+	0	NA	Intergenic	Intergenic	230207	NM_020584	57321	Mm.213064	NM_020584	ENSMUSG00000033430	Terf2ip	Rap1	telomeric repeat binding factor 2, interacting protein	protein-coding
unique_peak2-38647-5-8--0.874305337448166-1.10484139239135	chr7	90306985	90307568	+	0	NA	Intergenic	Intergenic	-187375	NR_045855	71285	Mm.76818	NR_045855		4933430H16Rik	-	RIKEN cDNA 4933430H16 gene	ncRNA
common_peak1-17885-26-14-1.02100849654994-1.59386218057211	chr7	118494025	118495168	+	0	NA	Intergenic	Lx9|LINE|L1	-228407	NR_015573	75479	Mm.381620	NR_015573		1700012D14Rik	-	RIKEN cDNA 1700012D14 gene	ncRNA
common_peak2-28784-9-8-0.0196884049619079-1.03275496310833	chr5	63827070	63827480	+	0	NA	Intergenic	Intergenic	-213067	NM_177006	319807	Mm.319487	NM_028470	ENSMUSG00000090061	Nwd2	3110047P20Rik|B830017A01Rik|Hn1-ps2|mKIAA1239	NACHT and WD repeat domain containing 2	protein-coding
common_peak1-15304-17-24--0.425559851569687-0.427564438475253	chr4	43561770	43562524	+	0	NA	intron (NM_011602, intron 16 of 56)	intron (NM_011602, intron 16 of 56)	13308	NM_011602	21894	Mm.208601	NM_011602	ENSMUSG00000028465	Tln1	Tln	talin 1	protein-coding
common_peak1-18510-23-23-0.136805003787924-0.340939137447793	chr8	88117841	88118575	+	0	NA	Intergenic	Intergenic	-39038	NM_019794	56445	Mm.475573	NM_019794	ENSMUSG00000031701	Dnaja2	1500017M13Rik|2010206B19Rik|DNAJ|DNJ3|Dnaj3|HIRIP4|PRO3015|mDj3	DnaJ (Hsp40) homolog, subfamily A, member 2	protein-coding
unique_peak1-2382-16-7-1.11826364226806-1.23399803405144	chr15	96829736	96830586	+	0	NA	intron (NM_027052, intron 13 of 15)	intron (NM_027052, intron 13 of 15)	56226	NM_027052	69354	Mm.250980	NM_027052	ENSMUSG00000022464	Slc38a4	1110012E16Rik|1700012A18Rik|Ata3|mATA3|mNAT3	solute carrier family 38, member 4	protein-coding
unique_peak1-7177-7-4-0.477162735410827-1.09384600808989	chr9	62400531	62401124	+	0	NA	Intergenic	Intergenic	-15976	NM_175484	235431	Mm.335229	NM_175484	ENSMUSG00000041729	Coro2b	CLIPINC|E130012P22Rik	coronin, actin binding protein, 2B	protein-coding
common_peak2-20394-34-53--0.372818975162202-0.578228366855311	chr10	20311508	20312345	+	0	NA	intron (NM_013875, intron 2 of 12)	intron (NM_013875, intron 2 of 12)	132948	NM_013875	29863	Mm.425617	NM_013875	ENSMUSG00000019990	Pde7b	-	phosphodiesterase 7B	protein-coding
unique_peak2-38966-6-7--0.434601889619698-0.97990265578305	chr8	34108853	34109400	+	0	NA	Intergenic	Intergenic	-48628	NM_001177589	100042715	Mm.291093	NM_001177589		Gm3985	-	predicted gene 3985	protein-coding
common_peak1-17917-31-32-0.18084455145467-0.379775532323848	chr7	126474668	126475621	+	0	NA	Intergenic	L1MA4|LINE|L1	127642	NM_025989	67133	Mm.46403	NM_025989	ENSMUSG00000030954	Gp2	2310037I18Rik|AV060639	glycoprotein 2 (zymogen granule membrane)	protein-coding
common_peak1-11958-10-7-0.356415345008769-1.12966497611638	chr17	6116776	6117295	+	0	NA	intron (NM_001103181, intron 1 of 13)	URR1B|DNA|MER1_type	10205	NM_001103181	68842	Mm.449307	NM_054040	ENSMUSG00000034377	Tulp4	1110057P05Rik|2210038L17Rik|Tusp	tubby like protein 4	protein-coding
common_peak2-25405-51-71--0.0950011758397391-0.326210013932454	chr19	24476784	24478108	+	0	NA	intron (NM_008846, intron 3 of 14)	intron (NM_008846, intron 3 of 14)	74518	NM_026520	68034	Mm.440181	NM_026520		Fam122a	2410124L17Rik|2900009I07Rik|ENSMUSG00000051082|Gm9849	family with sequence similarity 122, member A	protein-coding
common_peak1-15264-15-10-0.552733131918359-0.604422558181019	chr4	24898074	24898812	+	0	NA	Intergenic	Intergenic	-2123	NM_030733	81006	Mm.160412	NM_030733	ENSMUSG00000040372	Gpr63	PSP24beta|Psp24-2	G protein-coupled receptor 63	protein-coding
unique_peak2-35453-5-12--1.40482005414695-1.62698961692433	chr17	35866336	35866907	+	0	NA	Intergenic	ID_B1|SINE|B4	-25537	NM_172962	12305	Mm.5021	NM_007584	ENSMUSG00000003534	Ddr1	6030432F18|AI323681|CD167a|Cak|Nep|PTK3A	discoidin domain receptor family, member 1	protein-coding
common_peak2-19758-11-9-0.186765489364251-0.344532117358383	chr1	77465503	77466070	+	0	NA	intron (NM_007936, intron 3 of 17)	intron (NM_007936, intron 3 of 17)	27557	NR_105770	102465180		NR_105770		Mir6352	mmu-mir-6352	microRNA mir-6352	ncRNA
common_peak1-17295-9-3-1.18961340640422-1.57096726280955	chr6	136900215	136900672	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-2601	NM_023898	78600	Mm.290622	NM_023898		Pde6h	A930033D18Rik|PDEgamma	phosphodiesterase 6H, cGMP-specific, cone, gamma	protein-coding
common_peak1-18426-63-103--0.262127127070502-0.593954113235467	chr8	78508128	78509424	+	0	NA	TTS (NM_027944)	TTS (NM_027944)	536183	NM_001164235	71831	Mm.443238	NM_027944	ENSMUSG00000031620	1700007B14Rik	-	RIKEN cDNA 1700007B14 gene	protein-coding
common_peak1-15619-11-11--0.0762689164695427-0.301029995663976	chr4	133277191	133277735	+	0	NA	intron (NM_001080819, intron 2 of 19)	B2_Mm2|SINE|B2	-4440	NR_106086	102465707		NR_106086		Mir7227	mmu-mir-7227	microRNA mir-7227	ncRNA
unique_peak2-36845-7-19--1.52283726458917-1.55050753388976	chr3	89228306	89229121	+	0	NA	exon (NM_011368, exon 8 of 13)	exon (NM_011368, exon 8 of 13)	3170	NM_001113331	20416	Mm.86595	NM_011368	ENSMUSG00000042626	Shc1	Shc|ShcA|p66|p66shc	src homology 2 domain-containing transforming protein C1	protein-coding
common_peak2-28210-11-6-0.701338662194009-1.32595962126035	chr4	117681814	117682225	+	0	NA	intron (NM_001285521, intron 4 of 10)	L1MEc|LINE|L1	-79651	NM_001284192	11876	Mm.56897	NM_009711	ENSMUSG00000028539	Artn	neublastin	artemin	protein-coding
common_peak1-9600-99-117-0.336714693920809-1.1389933161489	chr11	120233572	120235558	+	0	NA	intron (NM_027980, intron 5 of 9)	intron (NM_027980, intron 5 of 9)	5495	NM_027980	71885	Mm.274890	NM_027980	ENSMUSG00000025384	2310003H01Rik	Faap100	RIKEN cDNA 2310003H01 gene	protein-coding
common_peak1-8613-18-11-0.727956650507195-0.876666802405043	chr10	116267816	116268564	+	0	NA	intron (NM_001033333, intron 9 of 24)	PB1D9|SINE|Alu	65745	NM_001033333	237558	Mm.336386	NM_001033333	ENSMUSG00000034057	Myrfl	Gm239	myelin regulatory factor-like	protein-coding
common_peak1-19225-19-23--0.18227517405947-0.320777457303847	chr9	107568462	107569204	+	0	NA	intron (NM_001199218, intron 1 of 15)	intron (NM_001199218, intron 1 of 15)	897	NM_023805	76257	Mm.296560	NM_023805	ENSMUSG00000010064	Slc38a3	0610012J02Rik|D9Ucla2|Nat1|Slc38-3|Sn1|Snat3|mNAT	solute carrier family 38, member 3	protein-coding
unique_peak2-34117-5-25--2.40482005414695-3.46164246247458	chr13	21753330	21753958	+	0	NA	Intergenic	Intergenic	-2454	NM_146541	258534	Mm.271446	NM_146541	ENSMUSG00000049737	Olfr1361	MOR256-12	olfactory receptor 1361	protein-coding
unique_peak1-776-7-1-1.79909083029819-1.80617997398389	chr10	128961060	128961496	+	0	NA	Intergenic	Intergenic	-2007	NM_146930	258932	Mm.377754	NM_146930	ENSMUSG00000047626	Olfr791	MOR114-1	olfactory receptor 791	protein-coding
common_peak2-23878-36-51--0.221118631973337-0.382513308492835	chr16	33684118	33685539	+	0	NA	exon (NM_175256, exon 1 of 15)	exon (NM_175256, exon 1 of 15)	276	NM_175256	77446	Mm.245741	NM_172934	ENSMUSG00000075254	Heg1	4632417D23Rik|5530401I02Rik|9530025L16Rik|BC038614|Gm629|OTTMUSG00000027315	HEG homolog 1 (zebrafish)	protein-coding
unique_peak2-34245-6-18--1.68252940306328-1.66449268468235	chr13	55487400	55487984	+	0	NA	Intergenic	ORR1A3|LTR|MaLR	-13317	NM_011392	20505	Mm.276355	NM_011392	ENSMUSG00000021490	Slc34a1	NaPi-IIa|Npt2|Npt2a|Slc17a2	solute carrier family 34 (sodium phosphate), member 1	protein-coding
unique_peak2-33843-8-20--1.38709500483119-1.45476480588849	chr12	16532613	16533600	+	0	NA	Intergenic	Intergenic	63470	NM_015763	14245	Mm.153625	NM_015763	ENSMUSG00000020593	Lpin1	4631420P06|Kiaa0188|Lipin1|fld|mKIAA0188	lipin 1	protein-coding
unique_peak1-2740-9-0-3.18961340640422-3.01029995663981	chr16	97730600	97731081	+	0	NA	Intergenic	Intergenic	-4297	NM_020622	52793	Mm.327932	NM_020622	ENSMUSG00000022938	Fam3b	2-21|9030624C24Rik|D16Jhu19e|ORF9|Pander	family with sequence similarity 3, member B	protein-coding
common_peak2-19570-13-7-0.778472030637769-0.817533494790411	chr1	10932790	10933174	+	0	NA	Intergenic	Intergenic	-50564	NM_029525	109294	Mm.123247	NM_029525	ENSMUSG00000048960	Prex2	6230420N16Rik|AI316880|AI553603|C030045D06Rik|D430013K02|Depdc2|P-Rex2	phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2	protein-coding
common_peak2-21502-54-74--0.0557329288661466-0.30697942122102	chr11	93885187	93886684	+	0	NA	intron (NM_027569, intron 2 of 28)	intron (NM_027569, intron 2 of 28)	-19584	NM_001025430	70834	Mm.260737	NM_027569	ENSMUSG00000020859	Spag9	3110018C07Rik|4733401I23Rik|4831406C20Rik|AW552012|JLP|JSAP2|JSAP2a|Jip4|Mapk8ip4|syd1	sperm associated antigen 9	protein-coding
unique_peak1-5983-7-0-2.79909083029819-2.40823996531185	chr6	97963816	97964341	+	0	NA	intron (NM_001113198, intron 9 of 9)	MER82|DNA|MER2_type	22301	NM_008601	17342	Mm.333284	NM_008601	ENSMUSG00000035158	Mitf	BCC2|Bhlhe32|Gsfbcc2|Vitiligo|Wh|bw|mi|vit	microphthalmia-associated transcription factor	protein-coding
common_peak2-21732-10-8-0.186490343566457-1.078512453669	chr11	114933881	114934280	+	0	NA	Intergenic	G-rich|Low_complexity|Low_complexity	-10728	NM_172050	217306	Mm.222667	NM_172050	ENSMUSG00000048498	Cd300e	BC034097|CLM2|Cd300le|TREM5	CD300e antigen	protein-coding
common_peak1-7539-33-26-0.576450060362061-0.950816664083185	chr1	36088071	36089484	+	0	NA	Intergenic	MT2_Mm|LTR|ERVL	-36468	NM_015818	50785	Mm.213566	NM_015818	ENSMUSG00000045216	Hs6st1	6Ost1	heparan sulfate 6-O-sulfotransferase 1	protein-coding
common_peak2-21074-10-10--0.103016273628528-0.301029995663987	chr11	49846149	49846596	+	0	NA	intron (NM_001290750, intron 1 of 7)	intron (NM_001290750, intron 1 of 7)	7539	NM_001290750	59044	Mm.359004	NM_021540	ENSMUSG00000020376	Rnf130	G1RZFP|G1rp|GOLIATH|GP	ring finger protein 130	protein-coding
common_peak2-28325-18-9-0.990991056340989-1.23014042908325	chr4	133878680	133879183	+	0	NA	exon (NM_001039048, exon 5 of 9)	exon (NM_001039048, exon 5 of 9)	7896	NM_001039048	433766	Mm.331961	NM_001039048	ENSMUSG00000028834	Trim63	MuRF1|RF1|Rnf28	tripartite motif-containing 63	protein-coding
common_peak2-22757-30-27-0.362320487434269-0.581176766834141	chr13	114387468	114388353	+	0	NA	intron (NM_130796, intron 1 of 1)	intron (NM_130796, intron 1 of 1)	20862	NM_130796	170625	Mm.33721	NM_130796	ENSMUSG00000042364	Snx18	Snag1	sorting nexin 18	protein-coding
common_peak2-23574-44-75--0.42603467887505-0.835692031846863	chr15	79687197	79688388	+	0	NA	Intergenic	MERVL_2A-int|LTR|ERVL	-23029	NM_001013362	504193	Mm.38438	NM_029079	ENSMUSG00000022421	Npcd	Cbx6-Nptxr	neuronal pentraxin chromo domain	protein-coding
common_peak2-22762-28-24-0.409102930046738-0.610902792227729	chr13	118386547	118387255	+	0	NA	Intergenic	L1MC|LINE|L1	-4226	NM_010408	15165	Mm.343429	NM_010408		Hcn1	Bcng1|C630013B14Rik|HAC2	hyperpolarization-activated, cyclic nucleotide-gated K+ 1	protein-coding
common_peak2-26976-88-110-0.220996542820426-0.629368628758411	chr2	167420850	167422607	+	0	NA	Intergenic	Intergenic	35777	NM_023230	66589	Mm.278783	NM_023230	ENSMUSG00000078923	Ube2v1	0610011J09Rik|AI256840|CROC-1|CROC1|D7Bwg1382e|UEV-1	ubiquitin-conjugating enzyme E2 variant 1	protein-coding
unique_peak1-1136-9-6-0.382258484346616-1.11707584880836	chr11	96140360	96141020	+	0	NA	Intergenic	Intergenic	-2529	NM_010461	15416	Mm.4822	NM_010461	ENSMUSG00000056648	Hoxb8	Hox-2.4	homeobox B8	protein-coding
common_peak2-29199-12-9-0.326847890200276-0.459837087125828	chr5	136479930	136480458	+	0	NA	intron (NM_023742, intron 2 of 10)	intron (NM_023742, intron 2 of 10)	9524	NM_001256098	74198	Mm.275574	NM_023742	ENSMUSG00000004947	Dtx2	2610524D08Rik|AA408415|AU022494|Deltex2	deltex 2 homolog (Drosophila)	protein-coding
common_peak2-30982-14-22--0.624345795699369-0.590343908676233	chr8	3426046	3426674	+	0	NA	intron (NM_133962, intron 1 of 19)	ZP3AR|Satellite|Satellite	33352	NM_133962	102098	Mm.170461	NM_133962	ENSMUSG00000004568	Arhgef18	AI467246|D030053O22Rik	rho/rac guanine nucleotide exchange factor (GEF) 18	protein-coding
unique_peak1-6854-13-7-0.778472030637769-0.817533494790411	chr8	85035749	85036391	+	0	NA	Intergenic	L1Md_F|LINE|L1	-109585	NM_008357	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak2-26555-19-33--0.684775514588653-0.884951936461256	chr2	100519249	100520033	+	0	NA	Intergenic	MIR3|SINE|MIR	-945264	NM_009020	19374	Mm.4988	NM_009020	ENSMUSG00000032864	Rag2	Rag-2	recombination activating gene 2	protein-coding
common_peak1-18588-11-8-0.338768582809301-1.14218153353838	chr8	106400178	106400825	+	0	NA	Intergenic	Intergenic	-225024	NM_009868	12562	Mm.21767	NM_009868	ENSMUSG00000031871	Cdh5	7B4|AA408225|Cd144|VE-Cad|VECD|VEcad|Vec	cadherin 5	protein-coding
common_peak2-24285-42-106--0.999137658533963-4.03831682545896	chr17	17825583	17828155	+	0	NA	Intergenic	RLTR25A|LTR|ERVK	-14036	NM_001104539	626942	Mm.404019	NM_001104539	ENSMUSG00000092120	Vmn2r90	EG626942	vomeronasal 2, receptor 90	protein-coding
common_peak1-8765-16-29--0.788626953340457-0.98872314135509	chr11	6006158	6006889	+	0	NA	3' UTR (NM_173748, exon 6 of 6)	3' UTR (NM_173748, exon 6 of 6)	-40772	NM_007595	12323	Mm.439733	NM_007595	ENSMUSG00000057897	Camk2b	Camk2d	calcium/calmodulin-dependent protein kinase II, beta	protein-coding
common_peak1-8972-12-6-0.841421063030034-1.58711810488664	chr11	58214442	58215015	+	0	NA	Intergenic	Intergenic	-19885	NM_027239	69864	Mm.45641	NM_027239	ENSMUSG00000013653	1810065E05Rik	AV047390	RIKEN cDNA 1810065E05 gene	protein-coding
common_peak2-26747-14-8-0.729291158915332-0.771068449301682	chr2	132923786	132924220	+	0	NA	Intergenic	MER5A|DNA|MER1_type	-152231	NM_198029	241639	Mm.209784	NM_198029	ENSMUSG00000027356	Fermt1	5830467P10Rik|Kindlin-1	fermitin family homolog 1 (Drosophila)	protein-coding
common_peak1-12739-26-12-1.22745937401737-2.03163221100073	chr18	55086848	55088049	+	0	NA	intron (NM_175751, intron 3 of 9)	intron (NM_175751, intron 3 of 9)	62386	NM_175751	269023	Mm.192984	NM_175751	ENSMUSG00000052713	Zfp608	4932417D18Rik|D430007A19Rik|Znf608	zinc finger protein 608	protein-coding
unique_peak2-38509-2-4--1.23938235115068-0.931118710592187	chr7	44467472	44467870	+	0	NA	Intergenic	Intergenic	2052233	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak2-22561-31-41--0.167078751965637-0.345592563585011	chr13	63239456	63240820	+	0	NA	intron (NM_001289926, intron 5 of 15)	L2b|LINE|L2	-101200	NR_110520	72061	Mm.188105	NM_028079	ENSMUSG00000021458	2010111I01Rik	2300006M17Rik|AP-O|Aopep	RIKEN cDNA 2010111I01 gene	protein-coding
unique_peak2-33913-7-9--0.522837264589173-1.05908390183068	chr12	68136970	68137459	+	0	NA	intron (NM_001193266, intron 1 of 16)	intron (NM_001193266, intron 1 of 16)	186322	NM_001193266	320772	Mm.227680	NM_207010		Mdga2	6720489L24Rik|9330209L04Rik|Adp|Mamdc1	MAM domain containing glycosylphosphatidylinositol anchor 2	protein-coding
unique_peak2-33840-5-6--0.511735258063458-0.947717972411649	chr12	14301952	14302293	+	0	NA	Intergenic	Intergenic	33782	NR_045003	791361	Mm.217963	NR_045003		Gm16497	ENSMUSG00000066623	predicted gene 16497	ncRNA
common_peak2-27544-24-22-0.269647946710704-0.457753417732779	chr3	96219011	96219751	+	0	NA	promoter-TSS (NR_001579)	promoter-TSS (NR_001579)	-625	NR_001579	21748		NR_001579	ENSMUSG00000064796	Terc	mTER|mTR	telomerase RNA component	ncRNA
common_peak1-14989-64-44-0.973593305378929-3.54762341874443	chr3	107963907	107965548	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-6927	NM_175470	229714	Mm.73666	NM_175470	ENSMUSG00000046793	Gpr61	-	G protein-coupled receptor 61	protein-coding
unique_peak1-3322-12-3-1.64877598508764-2.36932189928148	chr18	82489389	82489936	+	0	NA	Intergenic	L1Md_F3|LINE|L1	86507	NM_008082	14427	Mm.6219	NM_008082	ENSMUSG00000024553	Galr1	Galnr1	galanin receptor 1	protein-coding
common_peak2-24819-24-46--0.761378948909921-1.26138754964088	chr17	70850280	70851400	+	0	NA	intron (NM_027712, intron 1 of 9)	intron (NM_027712, intron 1 of 9)	-20610	NM_001128180	224997	Mm.311840	NM_027712	ENSMUSG00000003279	Dlgap1	4933422O14Rik|9630002F18|AI845682|AI848168|BB075781|D17Bwg0511e|GKAP/SAPAP|GKPA/SAPAP|Gkap|Sapap1|mKIAA4162	discs, large (Drosophila) homolog-associated protein 1	protein-coding
unique_peak2-35062-10-12--0.344024373132323-0.340565874754526	chr16	13239886	13240472	+	0	NA	Intergenic	Intergenic	-16395	NM_001122667	239719	Mm.270643	NM_153588	ENSMUSG00000009569	Mkl2	ENSMUSG00000075401|Gt4-1|MRTF-B|Mrtfb|mKIAA1243	MKL/myocardin-like 2	protein-coding
common_peak2-31370-44-44-0.33003973823886-0.665385344403438	chr8	84984342	84986481	+	0	NA	Intergenic	L1M3|LINE|L1	-58926	NM_008357	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak2-26515-12-11-0.0638134843664826-0.337263207250336	chr2	90846370	90847006	+	0	NA	intron (NM_017368, intron 8 of 14)	intron (NM_017368, intron 8 of 14)	-29096	NM_009023	19400	Mm.1272	NM_009023	ENSMUSG00000002104	Rapsn	43kDa|Nraps|Raps|rapsyn	receptor-associated protein of the synapse	protein-coding
unique_peak2-37237-4-10--1.48289213249054-1.5150158574804	chr4	89524296	89524812	+	0	NA	Intergenic	L1Md_F2|LINE|L1	169665	NM_175647	242523	Mm.130167	NM_175647	ENSMUSG00000043753	Dmrta1	Dmrt4	doublesex and mab-3 related transcription factor like family A1	protein-coding
unique_peak2-35146-5-8--0.874305337448166-1.10484139239135	chr16	31638190	31638519	+	0	NA	Intergenic	Lx8|LINE|L1	-25175	NM_001252435	13383	Mm.382	NM_007862	ENSMUSG00000022770	Dlg1	B130052P05Rik|Dlgh1|E-dlg/SAP97|SAP-97|SAP97|mKIAA4187	discs, large homolog 1 (Drosophila)	protein-coding
common_peak2-26469-11-6-0.701338662194009-1.32595962126035	chr2	77170095	77170661	+	0	NA	Intergenic	Intergenic	-51729	NM_175465	228071	Mm.27120	NM_175465	ENSMUSG00000042272	Sestd1	1500031J16Rik|A930010O20|Solo/Trio8	SEC14 and spectrin domains 1	protein-coding
common_peak1-15933-64-64-0.443078588680149-1.12735745316731	chr5	25529581	25530951	+	0	NA	Intergenic	Intergenic	264422	NM_001004365	242894	Mm.150319	NM_001004365	ENSMUSG00000056367	Actr3b	9630005C02|ARP11|AW047569|Arp3b|Arp3beta	ARP3 actin-related protein 3B	protein-coding
unique_peak2-33493-5-10--1.16381195464315-1.33892459842472	chr11	71019934	71020368	+	0	NA	intron (NM_001040696, intron 3 of 14)	L1_Mm|LINE|L1	-5193	NM_001162414	637515	Mm.390402	NM_001039680	ENSMUSG00000070390	Nlrp1b	ENSMUSG00000070390|Nalp1b|OTTMUSG00000006087|OTTMUSG00000006089	NLR family, pyrin domain containing 1B	protein-coding
common_peak1-8252-26-38--0.357503126703786-0.505877949819268	chr10	19591928	19592741	+	0	NA	intron (NM_008822, intron 8 of 9)	CpG	-21069	NM_029529	76157	Mm.74324	NM_029529	ENSMUSG00000050473	Slc35d3	6230421J19Rik|Frcl1	solute carrier family 35, member D3	protein-coding
common_peak1-8325-24-11-1.20824740204656-1.9654245668484	chr10	43605015	43605911	+	0	NA	intron (NM_001081054, intron 5 of 10)	intron (NM_001081054, intron 5 of 10)	16079	NM_001081054	76563	Mm.5904	NM_001081054	ENSMUSG00000019863	Qrsl1	2700038P16Rik|C80053|GatA	glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1	protein-coding
unique_peak2-34422-1-12--3.32749672835784-3.1004765869889	chr14	19584724	19585391	+	0	NA	intron (NM_144839, intron 3 of 5)	L1_Mm|LINE|L1	141084	NM_144839	218793	Mm.23551	NM_144839	ENSMUSG00000058317	Ube2e2	BC016265	ubiquitin-conjugating enzyme E2E 2	protein-coding
common_peak1-9079-36-46--0.0752677655098832-0.303416277109641	chr11	69632682	69633731	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-1264	NM_175368	108803	Mm.73263	NM_175368	ENSMUSG00000044084	4933402P03Rik	-	RIKEN cDNA 4933402P03 gene	protein-coding
unique_peak1-1251-8-1-2.00522241794757-2.05605744720049	chr11	115831379	115831859	+	0	NA	Intergenic	Intergenic	-4420	NM_001005608	192897	Mm.213873	NM_133663	ENSMUSG00000020758	Itgb4	AA407042|C230078O20|CD104	integrin beta 4	protein-coding
unique_peak1-6587-16-5-1.53330114154691-1.80287260729378	chr7	143624505	143625291	+	0	NA	Intergenic	Intergenic	-83800	NR_040459	330664	Mm.127762	NR_040459		C230079O03Rik	C230079O03	RIKEN cDNA C230079O03 gene	ncRNA
unique_peak1-2983-7-1-1.79909083029819-1.80617997398389	chr17	78207277	78207698	+	0	NA	Intergenic	Intergenic	-392101	NM_015800	50766	Mm.311912	NM_015800	ENSMUSG00000024074	Crim1	AU015004	cysteine rich transmembrane BMP regulator 1 (chordin like)	protein-coding
common_peak1-11217-9-13--0.617741515653384-0.459837087125828	chr15	79075192	79075754	+	0	NA	intron (NM_001045558, intron 7 of 12)	intron (NM_001045558, intron 7 of 12)	9705	NM_020516	57274	Mm.441697	NM_020516	ENSMUSG00000032988	Slc16a8	Mct3	solute carrier family 16 (monocarboxylic acid transporters), member 8	protein-coding
common_peak2-26879-40-32-0.614581563392645-1.25391625579201	chr2	156547001	156548103	+	0	NA	promoter-TSS (NR_040505)	promoter-TSS (NR_040505)	537	NM_001042487	228836	Mm.22094	NM_146128	ENSMUSG00000061689	Dlgap4	AI225853|BC024558|DAP-4|DAP4|SAPAP-4|Sapap4|WBP16	discs, large homolog-associated protein 4 (Drosophila)	protein-coding
unique_peak2-33497-2-7--1.91745425626332-1.45399745587252	chr11	72488662	72489226	+	0	NA	intron (NM_025985, intron 3 of 5)	B3|SINE|B2	-14560	NM_009671	11736	Mm.10313	NM_009671	ENSMUSG00000020790	Ankfy1	Ankhzn|ZFYVE14|mKIAA1255	ankyrin repeat and FYVE domain containing 1	protein-coding
common_peak2-31409-29-24-0.468433890840386-0.748982406290548	chr8	92363148	92364151	+	0	NA	Intergenic	L1MC2|LINE|L1	508502	NM_172913	244579	Mm.302755	NM_172913	ENSMUSG00000043668	Tox3	500-9|BC052044|C230068E13|CAGF9|Tnrc9	TOX high mobility group box family member 3	protein-coding
unique_peak1-4743-10-2-1.77145284428761-2.09384600808989	chr3	108411186	108411708	+	0	NA	intron (NM_181400, intron 1 of 14)	Lx7|LINE|L1	17251	NM_181400	99512	Mm.285968	NM_181400	ENSMUSG00000040389	Wdr47	1810073M12Rik|AA552998|mKIAA0893	WD repeat domain 47	protein-coding
unique_peak2-34121-7-16--1.28837201095215-1.08658567012551	chr13	21780134	21780584	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-13510	NM_146543	258536	Mm.223076	NM_146543	ENSMUSG00000094398	Olfr1360	MOR256-10|MOR256-35	olfactory receptor 1360	protein-coding
common_peak1-16493-22-15-0.647284105087405-0.849699271740893	chr5	138622464	138623423	+	0	NA	intron (NM_009315, intron 10 of 14)	intron (NM_009315, intron 10 of 14)	5471	NM_009315	21343	Mm.248517	NM_009315	ENSMUSG00000036980	Taf6	80kDa|AW549759|TAF(II)80|TAFII70|Taf2e|p80	TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor	protein-coding
unique_peak1-4085-64-1-5.4654464017086-24.7114641675759	chr2	71540457	71542220	+	0	NA	Intergenic	HAL1|LINE|L1	-16136	NR_037979	381371	Mm.330284	NM_201366	ENSMUSG00000064263	Gm1631	-	predicted gene 1631	ncRNA
common_peak2-25600-54-33-1.08562292037939-3.52320289706014	chr19	8819491	8820911	+	0	NA	intron (NM_019829, intron 4 of 9)	intron (NM_019829, intron 4 of 9)	2740	NR_105958	102465599		NR_105958		Mir6992	mmu-mir-6992	microRNA mir-6992	ncRNA
common_peak2-28919-8-17--1.16470258349474-1.02063122982878	chr5	92747007	92747444	+	0	NA	Intergenic	Intergenic	-8175	NM_172713	231452	Mm.86564	NM_172713	ENSMUSG00000029415	Sdad1	4931421J16|AA591032|AW538460	SDA1 domain containing 1	protein-coding
unique_peak2-33782-3-5--0.998945590680433-0.96108193396963	chr11	119624981	119625362	+	0	NA	intron (NM_028898, intron 6 of 33)	intron (NM_028898, intron 6 of 33)	70508	NR_045313	319454	Mm.442144	NR_045312	ENSMUSG00000085081	Rptoros	A430071A18Rik	regulatory associated protein of MTOR, complex 1, opposite strand	ncRNA
common_peak2-19787-31-37--0.0226888426304619-0.301029995663945	chr1	86358587	86359445	+	0	NA	Intergenic	Intergenic	-1091875	NM_001037909	620078	Mm.386456	NM_175219	ENSMUSG00000052477	C130026I21Rik	4930565N07Rik|OTTMUSG00000029174	RIKEN cDNA C130026I21 gene	protein-coding
common_peak1-14612-47-66--0.131247765691224-0.343786565003198	chr3	52087731	52089440	+	0	NA	intron (NM_019739, intron 1 of 2)	B1_Mur1|SINE|Alu	16326	NM_019739	56458	Mm.29891	NM_019739	ENSMUSG00000044167	Foxo1	AI876417|Afxh|FKHR|Fkhr1|Foxo1a	forkhead box O1	protein-coding
common_peak1-15483-29-21-0.652858461977813-1.06916698217164	chr4	108619227	108620545	+	0	NA	intron (NR_040664, intron 4 of 5)	(CA)n|Simple_repeat|Simple_repeat	24796	NR_040664	77173	Mm.402545	NR_040664	ENSMUSG00000086483	8030443G20Rik	-	RIKEN cDNA 8030443G20 gene	ncRNA
common_peak1-16921-22-20-0.254966682308644-0.421916810733237	chr6	81923374	81924219	+	0	NA	Intergenic	Intergenic	-7853	NM_026490	56284	Mm.276293	NM_026490	ENSMUSG00000030045	Mrpl19	9030416F12Rik|9130412E02Rik|D6Ertd157e|MRP-L15|RLX1|Rpml15	mitochondrial ribosomal protein L19	protein-coding
common_peak1-9484-14-10-0.439784541720347-0.519648556297791	chr11	106812497	106813342	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-30890	NM_025481	66313	Mm.340955	NM_025481	ENSMUSG00000018363	Smurf2	2810411E22Rik|AI558114|AI649275	SMAD specific E3 ubiquitin protein ligase 2	protein-coding
common_peak1-8149-18-27--0.494435770829252-0.528262014464654	chr1	191397186	191397861	+	0	NA	Intergenic	L2a|LINE|L2	114442	NM_001081363	108000	Mm.129746	NM_001081363	ENSMUSG00000026605	Cenpf	6530404A22Rik|AI325968|CENF|Lek1|PRO1779|mitosin	centromere protein F	protein-coding
common_peak1-15200-17-8-1.04837133676273-1.30305656033811	chr4	155581952	155582926	+	0	NA	Intergenic	Intergenic	5046	NR_030671	100382	Mm.461024	NR_030671		AW011738	-	expressed sequence AW011738	ncRNA
unique_peak1-3968-14-1-2.89921616035764-3.91338994363176	chr2	31810147	31810877	+	0	NA	intron (NM_145144, intron 2 of 5)	intron (NM_145144, intron 2 of 5)	4689	NM_145144	108897	Mm.24838	NM_145144	ENSMUSG00000001864	Aif1l	2810003C17Rik|AI043124|C87647|Iba2	allograft inflammatory factor 1-like	protein-coding
common_peak2-24426-9-11--0.395349094316936-0.344532117358383	chr17	17837281	17837813	+	0	NA	Intergenic	Intergenic	-3358	NM_001104539	626942	Mm.404019	NM_001104539	ENSMUSG00000092120	Vmn2r90	EG626942	vomeronasal 2, receptor 90	protein-coding
common_peak1-8136-10-3-1.35641534500877-1.75805390616669	chr1	190902748	190903233	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-71271	NM_172650	226823	Mm.209880	NM_172650	ENSMUSG00000026608	Kctd3	4930438A20Rik|9330185B06|E330032J19Rik|NY-REN-45	potassium channel tetramerisation domain containing 3	protein-coding
common_peak1-9781-9-25--1.51082631173687-2.00244947055753	chr12	57230319	57230849	+	0	NA	Intergenic	Lx3B|LINE|L1	-123646	NR_045048	100503961	Mm.136732	NR_045048		Gm19990	-	predicted gene, 19990	ncRNA
common_peak2-24708-11-12--0.191746133889479-0.310474156842889	chr17	46161070	46161590	+	0	NA	intron (NM_001287058, intron 4 of 5)	intron (NM_001287058, intron 4 of 5)	782	NM_001110267	22339	Mm.282184	NM_009505	ENSMUSG00000023951	Vegfa	Vegf|Vpf	vascular endothelial growth factor A	protein-coding
unique_peak2-39546-10-15--0.643584654991231-0.519648556297791	chr9	69442781	69443258	+	0	NA	Intergenic	Intergenic	138268	NR_037296	100526560		NR_037296	miRBase:MI0014106	Mir3109	mmu-mir-3109	microRNA 3109	ncRNA
common_peak2-22963-8-9--0.316705676939792-1.03275496310833	chr14	54184652	54185159	+	0	NA	Intergenic	MMERGLN-int|LTR|ERV1	-100710	NM_001205242	100568452	Mm.213248	NM_001205242		A430107P09Rik	Va10	RIKEN cDNA A430107P09 gene	protein-coding
common_peak2-31778-14-40--1.45833584426044-2.86150037395323	chr9	23222578	23223537	+	0	NA	intron (NM_028472, intron 13 of 14)	URR1B|DNA|MER1_type	195537	NM_028472	73230	Mm.335020	NM_028472	ENSMUSG00000031963	Bmper	3110056H04Rik|CV-2|Crim3|Cv2	BMP-binding endothelial regulator	protein-coding
unique_peak2-33482-7-18--1.4488366831454-1.38887104242188	chr11	69921791	69922416	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	15957	NM_007493	11890	Mm.1357	NM_007493	ENSMUSG00000040963	Asgr2	ASGPR2|Asgr|Asgr-2	asialoglycoprotein receptor 2	protein-coding
common_peak2-28015-11-8-0.338768582809301-1.14218153353838	chr4	46641578	46642177	+	0	NA	intron (NM_198664, intron 4 of 12)	intron (NM_198664, intron 4 of 12)	21194	NM_198664	381605	Mm.331595	NM_198664	ENSMUSG00000039813	Tbc1d2	A630005A06Rik|BC022630|Gm1037|PARIS-1|PARIS1	TBC1 domain family, member 2	protein-coding
common_peak1-14071-19-30--0.551508983725189-0.647723624534446	chr2	120970321	120971113	+	0	NA	intron (NM_001290812, intron 3 of 8)	MTD|LTR|MaLR	2888	NM_029475	75894	Mm.384805	NM_029475	ENSMUSG00000027259	Adal	4930578F03Rik	adenosine deaminase-like	protein-coding
common_peak1-13621-14-14--0.00767443525087419-0.308519316180257	chr2	24949725	24950385	+	0	NA	intron (NM_172204, intron 1 of 11)	intron (NM_172204, intron 1 of 11)	670	NM_001163626	241275	Mm.218774	NM_172204	ENSMUSG00000036805	Noxa1	NY-CO-31|SDCCAG31	NADPH oxidase activator 1	protein-coding
unique_peak1-3370-10-3-1.35641534500877-1.75805390616669	chr19	3334473	3334938	+	0	NA	intron (NM_013495, intron 1 of 18)	RSINE1|SINE|B4	11404	NM_013495	12894	Mm.18522	NM_013495	ENSMUSG00000024900	Cpt1a	C730027G07|CPTI|Cpt1	carnitine palmitoyltransferase 1a, liver	protein-coding
common_peak2-30976-31-32-0.18084455145467-0.379775532323848	chr8	3412105	3413601	+	0	NA	intron (NM_133962, intron 1 of 19)	ORR1E|LTR|MaLR	19845	NM_133962	102098	Mm.170461	NM_133962	ENSMUSG00000004568	Arhgef18	AI467246|D030053O22Rik	rho/rac guanine nucleotide exchange factor (GEF) 18	protein-coding
common_peak1-11593-13-8-0.608547029195456-0.660903317613904	chr16	17069875	17070506	+	0	NA	promoter-TSS (NM_001291047)	promoter-TSS (NM_001291047)	-42	NM_023249	106369	Mm.237941	NM_023249	ENSMUSG00000022773	Ypel1	0610009L05Rik|1700016N17Rik|1700019O22Rik|4921520K19Rik|4930511F14Rik|AV118478|Dgl1|Ppil2|mdgl-1	yippee-like 1 (Drosophila)	protein-coding
common_peak2-31058-64-51-0.765006683567512-2.46569628784775	chr8	20288290	20289538	+	0	NA	Intergenic	Intergenic	-268522	NR_028428	381598	Mm.359054	NM_001024708	ENSMUSG00000071793	2610005L07Rik	2810038F24Rik|6720476A01Rik	cadherin 11 pseudogene	pseudo
common_peak1-18317-20-24--0.155781405183531-0.319918318021793	chr8	48109879	48110792	+	0	NA	intron (NM_177304, intron 1 of 7)	intron (NM_177304, intron 1 of 7)	38056	NM_177304	320981	Mm.211429	NM_177304	ENSMUSG00000038173	Enpp6	4833421B01Rik|B830047L21Rik|D8Ertd514e|E-NPP 6|Npp6	ectonucleotide pyrophosphatase/phosphodiesterase 6	protein-coding
common_peak1-8420-9-7-0.18961340640422-1.05908390183068	chr10	75932083	75932610	+	0	NA	promoter-TSS (NM_172550)	promoter-TSS (NM_172550)	-487	NM_172550	216119	Mm.344778	NM_172550	ENSMUSG00000033126	Ybey	1110068N23Rik|A130042E20Rik|C21orf57|ORF57|ORF66	ybeY metallopeptidase	protein-coding
unique_peak1-1983-9-4-0.867685311516858-1.36011389749466	chr14	121878843	121879317	+	0	NA	intron (NM_053079, intron 11 of 22)	intron (NM_053079, intron 11 of 22)	25396	NM_053079	56643	Mm.155618	NM_053079	ENSMUSG00000025557	Slc15a1	D630032F02|PECT1|PEPT1	solute carrier family 15 (oligopeptide transporter), member 1	protein-coding
unique_peak2-36818-5-6--0.511735258063458-0.947717972411649	chr3	87919576	87919971	+	0	NA	intron (NM_001033484, intron 33 of 37)	intron (NM_001033484, intron 33 of 37)	-26544	NM_133665	17261	Mm.28184	NM_133665	ENSMUSG00000001419	Mef2d	C80750	myocyte enhancer factor 2D	protein-coding
common_peak2-32392-33-49--0.312518627249196-0.498996592876743	chrX	134600985	134601893	+	0	NA	intron (NM_030688, intron 2 of 10)	intron (NM_030688, intron 2 of 10)	142680	NM_026469	67944	Mm.443280	NM_026469	ENSMUSG00000071686	Tex13a	1700025D03Rik	testis expressed 13A	protein-coding
common_peak2-26044-6-4-0.24347001549294-0.989110657569874	chr2	18055129	18055407	+	0	NA	intron (NR_045538, intron 8 of 22)	L1MA4A|LINE|L1	69056	NM_001252561	17354	Mm.209175	NM_010804	ENSMUSG00000026743	Mllt10	Af10|B130021D15Rik|D630001B22Rik|mKIAA4140	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	protein-coding
common_peak2-31634-57-67-0.17857019882859-0.451948128797766	chr8	123709847	123711279	+	0	NA	Intergenic	MTD|LTR|MaLR	58978	NM_008024	14241	Mm.5111	NM_008024	ENSMUSG00000097084	Foxl1	FREAC7|Fkh6|fkh-6	forkhead box L1	protein-coding
common_peak1-9120-13-17--0.391452970804544-0.364171515310935	chr11	74829971	74830521	+	0	NA	intron (NM_001002764, intron 10 of 18)	intron (NM_001002764, intron 10 of 18)	49247	NR_030454	735274		NR_030454		Mir684-1	Mirn684-1	microRNA 684-1	ncRNA
common_peak2-25583-43-27-0.975208263466099-2.41952329912175	chr19	7294620	7295749	+	0	NA	Intergenic	ORR1D2|LTR|MaLR	-3078	NM_007750	12868	Mm.14022	NM_007750	ENSMUSG00000035885	Cox8a	COX8L	cytochrome c oxidase subunit VIIIa	protein-coding
common_peak2-25168-6-7--0.434601889619698-0.97990265578305	chr18	53523547	53523838	+	0	NA	intron (NM_029394, intron 3 of 6)	intron (NM_029394, intron 3 of 6)	53969	NM_008908	19038	Mm.4587	NM_008908	ENSMUSG00000024538	Ppic	CyP-20c	peptidylprolyl isomerase C	protein-coding
unique_peak2-33917-7-12--0.901348887842903-1.31827279259406	chr12	69356800	69357173	+	0	NA	Intergenic	Intergenic	-586728	NR_033146	100316870	Mm.379794	NR_033146		Gm17821	-	DDB1 and CUL4 associated factor 5 pseudogene	pseudo
common_peak2-28424-13-27--1.02888289141984-1.21173582416604	chr4	148038387	148039027	+	0	NA	intron (NM_001085505, intron 6 of 10)	intron (NM_001085505, intron 6 of 10)	21281	NM_001085505	230909	Mm.332067	NM_001085505	ENSMUSG00000070577	Gm572	b2b1167Clo	predicted gene 572	protein-coding
unique_peak2-36385-4-9--1.34538860874061-1.36011389749466	chr2	120352664	120353114	+	0	NA	intron (NM_011743, intron 9 of 21)	intron (NM_011743, intron 9 of 21)	36678	NM_011743	20402	Mm.485295	NM_011743	ENSMUSG00000027288	Zfp106	Cd-1|D2Dcr28|H3a|Sh3bp3|Znf106|sirm	zinc finger protein 106	protein-coding
unique_peak1-6840-8-3-1.00522241794757-1.39487600375387	chr8	82680202	82680649	+	0	NA	Intergenic	Intergenic	-98518	NM_020259	15245	Mm.254493	NM_020259		Hhip	Hhip1	Hedgehog-interacting protein	protein-coding
common_peak2-31796-5-8--0.874305337448166-1.10484139239135	chr9	35117640	35118057	+	0	NA	Intergenic	Intergenic	29158	NR_040715	71133	Mm.158577	NR_040715		4933422A05Rik	-	RIKEN cDNA 4933422A05 gene	ncRNA
unique_peak1-5622-11-4-1.18676548936425-1.68134727924692	chr6	6955287	6955823	+	0	NA	intron (NM_001077713, intron 1 of 1)	BLACKJACK|DNA|AcHobo	49537	NM_001077713	71238	Mm.389086	NM_001077713		Acn9	0610005M07Rik|4933430A16Rik	ACN9 homolog (S. cerevisiae)	protein-coding
unique_peak2-35048-6-11--1.01956439034085-1.32595962126035	chr16	4939100	4939673	+	0	NA	exon (NM_025839, exon 2 of 3)	exon (NM_025839, exon 2 of 3)	199	NR_037666	100503704	Mm.480572	NR_037666	ENSMUSG00000097397	Gm16861	-	predicted gene, 16861	ncRNA
unique_peak2-39214-16-36--1.09118972336089-1.81352036806615	chr8	106935662	106936720	+	0	NA	Intergenic	Intergenic	-16484	NM_153582	97487	Mm.29658	NM_153582	ENSMUSG00000096188	Cmtm4	Cklfsf4|D19397|ENSMUSG00000051554|Gm9853	CKLF-like MARVEL transmembrane domain containing 4	protein-coding
common_peak2-31852-26-26-0.173011589994994-0.363124929330838	chr9	48407718	48408432	+	0	NA	intron (NM_010924, intron 2 of 2)	intron (NM_010924, intron 2 of 2)	5107	NM_010924	18113	Mm.8362	NM_010924	ENSMUSG00000032271	Nnmt	-	nicotinamide N-methyltransferase	protein-coding
unique_peak1-7219-14-5-1.31425365963649-1.4372489031793	chr9	70327650	70328341	+	0	NA	intron (NM_033604, intron 2 of 14)	intron (NM_033604, intron 2 of 14)	23537	NM_033604	93836	Mm.29783	NM_033604	ENSMUSG00000032217	Rnf111	ARK|Arkadia	ring finger 111	protein-coding
common_peak2-20663-21-26--0.185398236897233-0.318406410381916	chr10	83543950	83544416	+	0	NA	Intergenic	Intergenic	358573	NM_001145198	69784	Mm.271188	NM_001145198	ENSMUSG00000087651	1500009L16Rik	2700050C19Rik|OCC-1	RIKEN cDNA 1500009L16 gene	protein-coding
common_peak2-22532-23-28--0.136213490618491-0.317118655902079	chr13	55570434	55571600	+	0	NA	intron (NM_001030296, intron 1 of 2)	intron (NM_001030296, intron 1 of 2)	5389	NM_001030296	432763	Mm.315457	NM_001030296	ENSMUSG00000034686	Prr7	XM_484263	proline rich 7 (synaptic)	protein-coding
common_peak1-16334-43-93--0.772025666153935-2.44359761317891	chr5	117356955	117358157	+	0	NA	Intergenic	MTA_Mm-int|LTR|MaLR	208446	NM_001122666	71954	Mm.34456	NM_178622	ENSMUSG00000066900	Suds3	2400003N08Rik|2410008L21Rik|AU067672|mSds3	suppressor of defective silencing 3 homolog (S. cerevisiae)	protein-coding
unique_peak1-4641-30-3-3.16967540949187-7.44793394430711	chr3	87764646	87765588	+	0	NA	Intergenic	(TTTTTG)n|Simple_repeat|Simple_repeat	-9898	NM_016701	18008	Mm.331129	NM_016701	ENSMUSG00000004891	Nes	AA166324|C78523|ESTM46	nestin	protein-coding
unique_peak2-37982-2-7--1.91745425626332-1.45399745587252	chr6	6149289	6149866	+	0	NA	intron (NM_015829, intron 1 of 17)	intron (NM_015829, intron 1 of 17)	17596	NM_015829	50799	Mm.24513	NM_015829	ENSMUSG00000015112	Slc25a13	AI785475|Ctrn	solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13	protein-coding
common_peak2-28277-8-13--0.802132504110034-0.562038191119711	chr4	129461606	129462407	+	0	NA	Intergenic	Intergenic	-35717	NM_008974	19244	Mm.193688	NM_008974	ENSMUSG00000028788	Ptp4a2	Prl-2	protein tyrosine phosphatase 4a2	protein-coding
common_peak2-31874-11-21--0.950738034385684-0.991115276827166	chr9	54950823	54951467	+	0	NA	Intergenic	RLTR25B|LTR|ERVK	-46031	NM_180600	109161	Mm.207894	NM_180600	ENSMUSG00000032307	Ube2q2	3010021M21Rik	ubiquitin-conjugating enzyme E2Q (putative) 2	protein-coding
common_peak1-12281-17-27--0.589058583852566-0.604689589251113	chr17	44733393	44734176	+	0	NA	intron (NR_073425, intron 5 of 5)	BC1_Mm|scRNA|scRNA	139341	NR_073425	12393	Mm.391013	NM_009820	ENSMUSG00000039153	Runx2	AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a	runt related transcription factor 2	protein-coding
common_peak2-30328-8-6-0.197867495889966-1.03789460276074	chr7	25154076	25154511	+	0	NA	promoter-TSS (NM_008433)	promoter-TSS (NM_008433)	-989	NM_001163510	16534	Mm.9911	NM_008433	ENSMUSG00000054342	Kcnn4	IK1|IKCA1|KCA4|KCa3.1|SK4|SKCas|mIKCa1	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4	protein-coding
unique_peak2-34434-2-6--1.72480917832092-1.26211192963361	chr14	20871322	20871731	+	0	NA	Intergenic	ORR1A2|LTR|MaLR	30868	NM_026209	67509	Mm.292423	NM_026209	ENSMUSG00000045107	Saysd1	1810063B07Rik|4930488P03Rik	SAYSVFN motif domain containing 1	protein-coding
common_peak1-15815-37-22-1.00243111542881-2.18062287223157	chr5	81673363	81674928	+	0	NA	intron (NM_198702, intron 3 of 27)	intron (NM_198702, intron 3 of 27)	223527	NM_198702	319387	Mm.273631	NM_198702	ENSMUSG00000037605	Lphn3	5430402I23Rik|CIRL-3|D130075K09Rik|Gm1379|LEC3|mKIAA0768	latrophilin 3	protein-coding
common_peak1-13863-40-13-1.85162076069349-5.53877394417364	chr2	69376069	69377763	+	0	NA	intron (NM_001081088, intron 4 of 78)	intron (NM_001081088, intron 4 of 78)	47208	NM_001081088	14725	Mm.23847	NM_001081088	ENSMUSG00000027070	Lrp2	AI315343|AW536255|D230004K18Rik|Gp330|Megalin|b2b1625.2Clo	low density lipoprotein receptor-related protein 2	protein-coding
unique_peak1-5817-11-6-0.701338662194009-1.32595962126035	chr6	71130983	71131481	+	0	NA	Intergenic	RSINE1|SINE|B4	-18650	NM_017399	14080	Mm.22126	NM_017399	ENSMUSG00000054422	Fabp1	Fabpl|L-FABP	fatty acid binding protein 1, liver	protein-coding
common_peak1-8907-28-33--0.0345037214288766-0.301029995664001	chr11	50324960	50325908	+	0	NA	Intergenic	Intergenic	-80821	NM_172557	216724	Mm.390400	NM_172557	ENSMUSG00000020375	Rufy1	3000002E04Rik|Rabip4|ZFYVE12	RUN and FYVE domain containing 1	protein-coding
common_peak2-28163-5-5--0.289342836727009-0.909929411522249	chr4	107889620	107890043	+	0	NA	intron (NM_001167936, intron 1 of 13)	B3|SINE|B2	696	NM_001167936	230590	Mm.301798	NM_001167936	ENSMUSG00000034645	Zyg11a	BC022150	zyg-11 family member A, cell cycle regulator	protein-coding
unique_peak2-39307-2-11--2.50241675698448-2.32232533660526	chr8	124278069	124278790	+	0	NA	intron (NM_020605, intron 2 of 4)	intron (NM_020605, intron 2 of 4)	23970	NM_020605	57340	Mm.306870	NM_020605	ENSMUSG00000025318	Jph3	JP-3|Jp3	junctophilin 3	protein-coding
unique_peak2-37973-5-9--1.02630843089322-1.21398586181642	chr6	135249909	135250344	+	0	NA	Intergenic	Intergenic	10276	NM_029595	76400	Mm.293018	NM_029595		Pbp2	1700023A18Rik|AI326308|Pebp-2|Pebp2	phosphatidylethanolamine binding protein 2	protein-coding
common_peak2-26852-59-62-0.348084077372661-0.797828185802482	chr2	154790985	154792141	+	0	NA	Intergenic	Intergenic	-47743	NM_015770	50518	Mm.315593	NM_015770	ENSMUSG00000027596	a	A<y>|ASIP|ASP|As	nonagouti	protein-coding
common_peak2-24335-28-316--3.25537991031795-57.9265025970256	chr17	4625987	4626669	+	0	NA	Intergenic	(CATTC)n|Simple_repeat|Simple_repeat	-368746	NM_001085355	239985	Mm.133401	NM_001085355	ENSMUSG00000069729	Arid1b	8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235	AT rich interactive domain 1B (SWI-like)	protein-coding
common_peak2-25675-21-36--0.639964100362715-0.825714541185117	chr19	10948369	10949288	+	0	NA	exon (NM_134142, exon 2 of 4)	exon (NM_134142, exon 2 of 4)	-4559	NM_133804	98170	Mm.490254	NM_133804	ENSMUSG00000024736	Tmem132a	6720481D13Rik|Hspa5bp1|Orai1|R74613	transmembrane protein 132A	protein-coding
unique_peak2-33041-1-8--2.79698201165906-2.05605744720049	chr10	71363779	71364202	+	0	NA	Intergenic	Tigger2b|DNA|MER2_type	79448	NR_003644	108950	Mm.212793	NM_175390	ENSMUSG00000043859	1700049L16Rik	-	hematological and neurological expressed 1-like pseudogene	pseudo
unique_peak1-7021-11-5-0.923731083530457-1.477227296591	chr8	126547258	126547989	+	0	NA	intron (NM_001029876, intron 1 of 8)	intron (NM_001029876, intron 1 of 8)	250	NM_001029876	382038	Mm.334891	NM_001029876	ENSMUSG00000031976	Urb2	C77575|mKIAA0133	URB2 ribosome biogenesis 2 homolog (S. cerevisiae)	protein-coding
unique_peak1-3345-8-5-0.420259917226415-1.10484139239135	chr19	5816183	5816720	+	0	NA	Intergenic	B3A|SINE|B2	-13780	NR_002847	72289	Mm.298256	NR_002847	ENSMUSG00000092341	Malat1	2210401K01Rik|9430072K23Rik|AI647968|Neat2	metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)	ncRNA
common_peak2-21153-10-8-0.186490343566457-1.078512453669	chr11	58103221	58103606	+	0	NA	Intergenic	GA-rich|Low_complexity|Low_complexity	-17158	NM_182996	103836	Mm.41440	NM_182996	ENSMUSG00000037243	Zfp692	AI746306|AI839920|Zfp692-ps|Znf692	zinc finger protein 692	protein-coding
common_peak2-30926-14-12-0.198776442216552-0.373562084705529	chr7	144972269	144972863	+	0	NA	Intergenic	RMER2|LTR|ERV1	343209	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
common_peak2-23238-13-5-1.19350952991661-1.95509489018123	chr15	8940138	8940517	+	0	NA	intron (NM_198024, intron 1 of 11)	L1MB3|LINE|L1	22378	NM_198024	223332	Mm.321371	NM_198024		Ranbp3l	C130037N17Rik	RAN binding protein 3-like	protein-coding
unique_peak1-4683-11-2-1.92373108353046-2.32232533660526	chr3	95672990	95673549	+	0	NA	intron (NM_078479, intron 1 of 1)	intron (NM_078479, intron 1 of 1)	1273	NM_078479	66292	Mm.24108	NM_078479	ENSMUSG00000054312	Mrps21	1810031B19Rik	mitochondrial ribosomal protein S21	protein-coding
unique_peak2-39323-5-5--0.289342836727009-0.909929411522249	chr8	126551918	126552312	+	0	NA	exon (NM_001029876, exon 3 of 9)	exon (NM_001029876, exon 3 of 9)	4742	NM_001029876	382038	Mm.334891	NM_001029876	ENSMUSG00000031976	Urb2	C77575|mKIAA0133	URB2 ribosome biogenesis 2 homolog (S. cerevisiae)	protein-coding
unique_peak2-39223-8-10--0.454209200689727-1.078512453669	chr8	108886757	108887374	+	0	NA	Intergenic	Intergenic	-25177	NM_021491	58994	Mm.23298	NM_021491	ENSMUSG00000031906	Smpd3	4631433G07Rik|AI427456|AW537966|fro|nSMase2	sphingomyelin phosphodiesterase 3, neutral	protein-coding
common_peak2-29901-13-8-0.608547029195456-0.660903317613904	chr6	113623984	113624428	+	0	NA	intron (NM_172161, intron 6 of 12)	Cheshire|DNA|MER1_type	-23287	NM_001033463	381801	Mm.333322	NM_001033463	ENSMUSG00000056952	Tatdn2	AI646012|mKIAA0218	TatD DNase domain containing 2	protein-coding
common_peak2-25325-32-30-0.324895708832785-0.556669751231381	chr18	75683131	75683937	+	0	NA	intron (NM_201354, intron 7 of 11)	intron (NM_201354, intron 7 of 11)	9235	NR_045879	100038353	Mm.440724	NR_045879	ENSMUSG00000097712	Gm10532	ENSMUSG00000073534	predicted gene 10532	ncRNA
common_peak2-19573-30-30-0.215479099104998-0.419637632935632	chr1	13589068	13589868	+	0	NA	Intergenic	L2|LINE|L2	-9523	NM_028173	72265	Mm.28765	NM_028173	ENSMUSG00000025935	Tram1	1810049E02Rik|TRAMP	translocating chain-associating membrane protein 1	protein-coding
unique_peak1-2477-11-2-1.92373108353046-2.32232533660526	chr16	4029693	4030354	+	0	NA	Intergenic	Intergenic	-7122	NM_010061	13419	Mm.440565	NM_010061	ENSMUSG00000005980	Dnase1	AI788650|DNaseI|Dnl1	deoxyribonuclease I	protein-coding
unique_peak1-1732-12-6-0.841421063030034-1.58711810488664	chr13	100108085	100108740	+	0	NA	intron (NM_026873, intron 3 of 9)	intron (NM_026873, intron 3 of 9)	6221	NM_026873	68927	Mm.276502	NM_026873	ENSMUSG00000021650	Ptcd2	1190005P08Rik	pentatricopeptide repeat domain 2	protein-coding
unique_peak2-39257-5-8--0.874305337448166-1.10484139239135	chr8	118323036	118323474	+	0	NA	Intergenic	L1Md_T|LINE|L1	-92461	NM_001025577	17132	Mm.275549	NM_001025577		Maf	2810401A20Rik|A230108G15Rik|AW047063|c-maf	avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog	protein-coding
common_peak1-15306-27-26-0.236658448731768-0.436052471002789	chr4	43669145	43669858	+	0	NA	promoter-TSS (NM_026871)	promoter-TSS (NM_026871)	-184	NM_026871	68917	Mm.25285	NM_026871	ENSMUSG00000028470	Hint2	1190005L05Rik	histidine triad nucleotide binding protein 2	protein-coding
unique_peak2-37901-6-17--1.60452689106201-1.49151883326343	chr5	142440742	142441519	+	0	NA	intron (NM_177879, intron 13 of 44)	(CA)n|Simple_repeat|Simple_repeat	-436321	NM_199068	17425	Mm.24214	NM_010812	ENSMUSG00000056493	Foxk1	A630048H08Rik|AI463295|ENSMUSG00000075577|Gm10868|Mnf	forkhead box K1	protein-coding
common_peak1-10274-53-77--0.14442920644632-0.353864072814984	chr13	58214672	58216528	+	0	NA	Intergenic	Intergenic	-11811	NM_001195075	100503085	Mm.379256	NM_001195075	ENSMUSG00000014164	Klhl3	7530408C15Rik|AI430941|EG627648	kelch-like 3	protein-coding
unique_peak1-1596-10-3-1.35641534500877-1.75805390616669	chr13	35383459	35384011	+	0	NA	Intergenic	Intergenic	110243	NR_045616	100503727	Mm.32214	NR_045616		1700011B04Rik	-	RIKEN cDNA 1700011B04 gene	ncRNA
common_peak1-10019-9-9--0.132314688483142-1.03275496310833	chr13	8871079	8871632	+	0	NA	promoter-TSS (NM_001039388)	promoter-TSS (NM_001039388)	-373	NM_001039388	207615	Mm.284654	NM_172445	ENSMUSG00000021147	Wdr37	-	WD repeat domain 37	protein-coding
common_peak1-16473-10-12--0.344024373132323-0.340565874754526	chr5	137293996	137294545	+	0	NA	intron (NM_024474, intron 3 of 12)	intron (NM_024474, intron 3 of 12)	64707	NM_024474	140709	Mm.295020	NM_024474	ENSMUSG00000004415	Col26a1	9430032K24Rik|BC002218|Col26a|Emid2|Emu2	collagen, type XXVI, alpha 1	protein-coding
common_peak2-29266-10-19--0.965512749878593-0.917676348953458	chr5	142367342	142367959	+	0	NA	intron (NM_177879, intron 5 of 44)	(TAGA)n|Simple_repeat|Simple_repeat	-509801	NM_199068	17425	Mm.24214	NM_010812	ENSMUSG00000056493	Foxk1	A630048H08Rik|AI463295|ENSMUSG00000075577|Gm10868|Mnf	forkhead box K1	protein-coding
common_peak1-17048-46-88--0.577737487717596-1.45828564771299	chr6	97148118	97149333	+	0	NA	intron (NM_001111106, intron 4 of 16)	intron (NM_001111106, intron 4 of 16)	6911	NM_001111106	22200	Mm.277626	NM_011666	ENSMUSG00000030061	Uba3	A830034N06Rik|AI256736|AI848246|AW546539|Ube1c	ubiquitin-like modifier activating enzyme 3	protein-coding
common_peak1-16201-9-13--0.617741515653384-0.459837087125828	chr5	92822641	92823166	+	0	NA	intron (NM_181728, intron 4 of 9)	intron (NM_181728, intron 4 of 9)	-30581	NR_038116	56066	Mm.131723	NM_019494	ENSMUSG00000060183	Cxcl11	Cxc11|H174|I-tac|Ip9|Itac|Scyb11|Scyb9b|b-R1|betaR1	chemokine (C-X-C motif) ligand 11	protein-coding
common_peak2-32066-10-21--1.10301627362853-1.16735254179725	chr9	92251211	92251897	+	0	NA	intron (NM_001033184, intron 6 of 6)	L1MA7|LINE|L1	47339	NM_001033184	78459	Mm.179195	NM_001033184	ENSMUSG00000074139	1700057G04Rik	-	RIKEN cDNA 1700057G04 gene	protein-coding
common_peak2-31479-10-9-0.0344872501214071-1.05503135781948	chr8	106308049	106308601	+	0	NA	Intergenic	Intergenic	180626	NR_045730	71058	Mm.67707	NR_045730		4933400L20Rik	-	RIKEN cDNA 4933400L20 gene	ncRNA
unique_peak2-39489-7-18--1.4488366831454-1.38887104242188	chr9	58487803	58488521	+	0	NA	intron (NM_001293673, intron 3 of 7)	intron (NM_001293673, intron 3 of 7)	58115	NM_009145	20320	Mm.15125	NM_009145	ENSMUSG00000032336	Nptn	AW554172|SDR-1|Sdfr1	neuroplastin	protein-coding
common_peak2-20615-22-37--0.600643408356181-0.808568985218824	chr10	80103779	80105154	+	0	NA	TTS (NM_145361)	TTS (NM_145361)	12065	NM_001159591	103236	Mm.29873	NM_134002	ENSMUSG00000003345	Csnk1g2	2810429I12Rik|AI463719	casein kinase 1, gamma 2	protein-coding
common_peak1-10301-11-16--0.578769256998726-0.503257505534083	chr13	64161937	64162540	+	0	NA	intron (NM_008291, intron 9 of 10)	A-rich|Low_complexity|Low_complexity	28271	NM_008291	15487	Mm.5109	NM_008291	ENSMUSG00000033122	Hsd17b3	-	hydroxysteroid (17-beta) dehydrogenase 3	protein-coding
common_peak2-26972-5-5--0.289342836727009-0.909929411522249	chr2	167063323	167063672	+	0	NA	intron (NM_008968, intron 1 of 9)	intron (NM_008968, intron 1 of 9)	2540	NM_008968	19223	Mm.2339	NM_008968	ENSMUSG00000017969	Ptgis	Cyp8|Cyp8a1|Pgis	prostaglandin I2 (prostacyclin) synthase	protein-coding
common_peak1-16787-57-108--0.502151284697997-1.43436086981469	chr6	39591963	39593618	+	0	NA	intron (NM_139294, intron 14 of 21)	ID_B1|SINE|B4	50208	NM_026612	68198	Mm.29415	NM_026612	ENSMUSG00000002416	Ndufb2	1810011O01Rik|8kDa|AGGG|AI325567|CI-AGGG	NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2	protein-coding
unique_peak2-37784-2-6--1.72480917832092-1.26211192963361	chr5	118059242	118059699	+	0	NA	intron (NM_001114545, intron 4 of 19)	intron (NM_001114545, intron 4 of 19)	195459	NM_001114545	333050	Mm.437947	NM_001034873	ENSMUSG00000061578	Ksr2	-	kinase suppressor of ras 2	protein-coding
common_peak2-32179-20-48--1.12663505952402-2.44914526326141	chr9	113930943	113932139	+	0	NA	intron (NM_178624, intron 1 of 14)	Lx8|LINE|L1	4328	NM_178624	72179	Mm.386808	NM_178624	ENSMUSG00000032507	Fbxl2	2810423A21Rik|Fbl3	F-box and leucine-rich repeat protein 2	protein-coding
unique_peak2-32844-5-9--1.02630843089322-1.21398586181642	chr1	193421887	193422411	+	0	NA	intron (NM_178632, intron 7 of 19)	intron (NM_178632, intron 7 of 19)	22536	NM_178632	77065	Mm.338175	NM_178632	ENSMUSG00000037461	Ints7	5930412E23Rik	integrator complex subunit 7	protein-coding
common_peak1-13844-24-16-0.705747061517378-1.02077663956384	chr2	60693704	60694798	+	0	NA	intron (NM_020296, intron 1 of 13)	intron (NM_020296, intron 1 of 13)	25244	NM_001141932	56878	Mm.259667	NM_020296	ENSMUSG00000026970	Rbms1	2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1	RNA binding motif, single stranded interacting protein 1	protein-coding
common_peak2-21905-6-11--1.01956439034085-1.32595962126035	chr12	8772309	8772891	+	0	NA	Intergenic	MLT1J|LTR|MaLR	-5602	NM_011519	20969	Mm.2580	NM_011519	ENSMUSG00000020592	Sdc1	AA408134|AA409076|CD138|Sstn|Synd|Synd1|syn-1	syndecan 1	protein-coding
unique_peak2-37272-9-16--0.897849434846119-0.732381977911291	chr4	115264169	115264790	+	0	NA	Intergenic	L1Md_F|LINE|L1	-8747	NR_033575	631037	Mm.441000	NR_033575		Cyp4b1-ps2	Gm12839|OTTMUSG00000008630	cytochrome P450, family 4, subfamily b, polypeptide 1, pseudogene 2	pseudo
unique_peak2-38130-5-9--1.02630843089322-1.21398586181642	chr6	83319979	83320586	+	0	NA	intron (NM_183138, intron 10 of 10)	intron (NM_183138, intron 10 of 10)	20804	NM_175277	78653	Mm.391470	NM_175277		Bola3	1810056O20Rik	bolA-like 3 (E. coli)	protein-coding
common_peak2-19969-16-19--0.203664452619301-0.325169893479371	chr1	133188950	133189746	+	0	NA	exon (NM_001081011, exon 22 of 23)	exon (NM_001081011, exon 22 of 23)	-13208	NM_019777	56489	Mm.386783	NM_019777	ENSMUSG00000042349	Ikbke	AW558201|IKK-i|IKKepsilon|Ikki	inhibitor of kappaB kinase epsilon	protein-coding
common_peak2-28091-48-39-0.648999056347452-1.53884632328361	chr4	86669187	86670464	+	0	NA	intron (NM_172426, intron 7 of 10)	intron (NM_172426, intron 7 of 10)	149507	NM_139306	230379	Mm.45019	NM_139306	ENSMUSG00000038007	Acer2	2410116I05Rik|Asah3l|CRG-L1|maCER2	alkaline ceramidase 2	protein-coding
unique_peak1-294-9-0-3.18961340640422-3.01029995663981	chr1	125437628	125438171	+	0	NA	intron (NM_199021, intron 5 of 25)	intron (NM_199021, intron 5 of 25)	504237	NM_199021	269109	Mm.483255	NM_199021	ENSMUSG00000036815	Dpp10	6430601K09Rik|DPP X|Dprp3	dipeptidylpeptidase 10	protein-coding
common_peak2-26137-13-5-1.19350952991661-1.95509489018123	chr2	13384978	13385260	+	0	NA	intron (NM_001081084, intron 14 of 66)	intron (NM_001081084, intron 14 of 66)	28384	NM_001081084	65969	Mm.313915	NM_001081084	ENSMUSG00000026726	Cubn	AA408369|AL022750|D2Wsu88e	cubilin (intrinsic factor-cobalamin receptor)	protein-coding
unique_peak1-58-17-5-1.63333383748388-2.19184853030482	chr1	33630744	33631459	+	0	NA	intron (NM_008922, intron 7 of 13)	L1_Mur3|LINE|L1	95538	NM_008922	19076	Mm.27705	NM_008922	ENSMUSG00000026134	Prim2	AI323589	DNA primase, p58 subunit	protein-coding
common_peak2-27170-33-63--0.668662437474471-1.42573967311544	chr3	32510395	32511314	+	0	NA	intron (NM_013531, intron 1 of 9)	intron (NM_013531, intron 1 of 9)	4603	NM_013531	14696	Mm.139192	NM_013531	ENSMUSG00000027669	Gnb4	6720453A21Rik|G(beta)4	guanine nucleotide binding protein (G protein), beta 4	protein-coding
unique_peak2-39791-9-8-0.0196884049619079-1.03275496310833	chrX	12857938	12858511	+	0	NA	promoter-TSS (NM_010028)	promoter-TSS (NM_010028)	76	NM_010028	13205	Mm.289662	NM_010028	ENSMUSG00000000787	Ddx3x	D1Pas1-rs2|Ddx3|Fin14	DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked	protein-coding
common_peak1-15769-22-23-0.0623216043662485-0.319130838712456	chr4	152177416	152178148	+	0	NA	Intergenic	GA-rich|Low_complexity|Low_complexity	106133	NR_033138	330004	Mm.291863	NM_001033414		Gm833	-	predicted gene 833	ncRNA
common_peak2-31414-11-14--0.398197011356905-0.379391706698377	chr8	94214539	94215152	+	0	NA	Intergenic	ORR1E|LTR|MaLR	110708	NM_001253822	16373	Mm.238044	NM_008393	ENSMUSG00000031734	Irx3	AI894186	Iroquois related homeobox 3	protein-coding
common_peak2-24432-8-6-0.197867495889966-1.03789460276074	chr17	21450353	21450780	+	0	NA	promoter-TSS (NM_134200)	promoter-TSS (NM_134200)	-415	NM_134200	171234	Mm.405416	NM_134200	ENSMUSG00000058030	Vmn1r237	V1rf3|Vfrf3	vomeronasal 1 receptor 237	protein-coding
common_peak2-24286-86-93-0.421046942354716-1.38494079641881	chr17	31981529	31984308	+	0	NA	3' UTR (NM_010831, exon 14 of 14)	3' UTR (NM_010831, exon 14 of 14)	9819	NM_010831	17691	Mm.290941	NM_010831	ENSMUSG00000024042	Sik1	Msk|Sik|Snf1lk	salt inducible kinase 1	protein-coding
common_peak1-9547-49-61-0.0520875126383089-0.316666098280098	chr11	116842529	116844071	+	0	NA	intron (NM_172948, intron 14 of 16)	intron (NM_172948, intron 14 of 16)	63123	NM_172948	268510	Mm.35141	NM_172948	ENSMUSG00000043857	Mgat5b	C330018B01|GnT-IX|mGnTVB	mannoside acetylglucosaminyltransferase 5, isoenzyme B	protein-coding
unique_peak2-34490-3-4--0.73591118484664-0.864171920961574	chr14	43812122	43812354	+	0	NA	Intergenic	Intergenic	-118129	NM_001244671	100042055	Mm.429109	NM_001244671	ENSMUSG00000095226	Gm10377	ENSMUSG00000072606	predicted gene 10377	protein-coding
unique_peak1-6190-11-6-0.701338662194009-1.32595962126035	chr6	147760346	147760905	+	0	NA	Intergenic	Intergenic	121862	NR_033636	100039727	Mm.396220	NR_033636	ENSMUSG00000085077	1700049E15Rik	Gm15761|OTTMUSG00000026044	RIKEN cDNA 1700049E15 gene	ncRNA
common_peak2-24265-85-93-0.400814396447013-1.26597998525012	chr16	94312598	94314040	+	0	NA	intron (NM_011377, intron 7 of 10)	intron (NM_011377, intron 7 of 10)	196144	NM_139145	110948	Mm.30921	NM_139145	ENSMUSG00000040820	Hlcs	410I21.SP6|D16Jhu34	holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase)	protein-coding
common_peak2-23580-11-11--0.0762689164695427-0.301029995663976	chr15	79927703	79928188	+	0	NA	intron (NM_207708, intron 1 of 3)	intron (NM_207708, intron 1 of 3)	6181	NM_207708	20972	Mm.230301	NM_009303	ENSMUSG00000022415	Syngr1	R75468|Syngr1b|p29	synaptogyrin 1	protein-coding
unique_peak2-35853-2-4--1.23938235115068-0.931118710592187	chr18	75386510	75386848	+	0	NA	intron (NM_027727, intron 14 of 16)	intron (NM_027727, intron 14 of 16)	70292	NR_045394	100503117	Mm.250517	NR_045393		2010010A06Rik	5033420E22Rik	RIKEN cDNA 2010010A06 gene	ncRNA
unique_peak1-1359-9-1-2.18961340640422-2.31132995230379	chr12	24928074	24928581	+	0	NA	Intergenic	Intergenic	-146193	NM_001256489	66808	Mm.379124	NM_001256489		9030624G23Rik	-	RIKEN cDNA 9030624G23 gene	protein-coding
common_peak2-27654-13-33--1.30899081061257-2.01759298435799	chr3	108155856	108157028	+	0	NA	intron (NM_019972, intron 16 of 19)	(TG)n|Simple_repeat|Simple_repeat	-11387	NM_026831	68753	Mm.75201	NM_026831	ENSMUSG00000068745	Mybphl	1110037P11Rik	myosin binding protein H-like	protein-coding
unique_peak2-34948-6-14--1.34149248522822-1.01572999746118	chr15	90401516	90402172	+	0	NA	intron (NM_025815, intron 8 of 19)	intron (NM_025815, intron 8 of 19)	107975	NM_025815	66871	Mm.290991	NM_025815	ENSMUSG00000052560	Cpne8	1200003E11Rik|1500031E20Rik	copine VIII	protein-coding
common_peak2-24454-59-106--0.416102985528569-1.09282224205313	chr17	23675441	23677679	+	0	NA	Intergenic	Intergenic	24633	NM_001033496	449521	Mm.268582	NM_001033496	ENSMUSG00000071256	Zfp213	BC038178|D17Ertd197e	zinc finger protein 213	protein-coding
common_peak1-11850-92-108-0.324167758925839-1.00028844196551	chr16	90820201	90822810	+	0	NA	Intergenic	MER119|DNA|MER1_type	-9599	NM_027627	70967	Mm.253077	NM_027627		Eva1c	1700092M14Rik|4931408A02Rik|Fam176c	eva-1 homolog C (C. elegans)	protein-coding
unique_peak2-38459-3-7--1.41398308995928-1.23214870625617	chr7	28766093	28766479	+	0	NA	Intergenic	Intergenic	-2110	NM_001081021	338354	Mm.389873	NM_001081021		Zfp780b	B230208L21Rik	zinc finger protein 780B	protein-coding
unique_peak2-32499-5-9--1.02630843089322-1.21398586181642	chr1	45925424	45925883	+	0	NA	Intergenic	Intergenic	56786	NM_016917	53945	Mm.28756	NM_016917	ENSMUSG00000025993	Slc40a1	Dusg|Fpn1|IREG1|MTP|MTP1|Ol5|Pcm|Slc11a3|Slc39a1	solute carrier family 40 (iron-regulated transporter), member 1	protein-coding
common_peak1-9091-11-20--0.883623838527147-0.876666802405043	chr11	69979844	69980406	+	0	NA	promoter-TSS (NM_001204252)	promoter-TSS (NM_001204252)	0	NM_001204252	17312	Mm.252405	NM_010796	ENSMUSG00000000318	Clec10a	CD301a|M-ASGP-BP-1|Mgl|Mgl1	C-type lectin domain family 10, member A	protein-coding
common_peak1-16998-27-13-1.18419102883763-2.09887956687855	chr6	88923777	88924881	+	0	NA	Intergenic	Intergenic	72084	NM_011906	24100	Mm.284480	NM_011906	ENSMUSG00000002871	Tpra1	40kDa|Gpr175|Tpra40	transmembrane protein, adipocyte asscociated 1	protein-coding
common_peak2-22171-48-63--0.0290728487651855-0.301029995663976	chr12	99392249	99393721	+	0	NA	Intergenic	Intergenic	104562	NM_008079	14420	Mm.5120	NM_008079	ENSMUSG00000021003	Galc	2310068B06Rik|A930008M05Rik|AW212969|AW413532|Gacy|twi|twitcher	galactosylceramidase	protein-coding
common_peak1-17191-40-39-0.337047587863736-0.649502410911277	chr6	124711480	124712991	+	0	NA	intron (NM_013509, intron 10 of 11)	RSINE1|SINE|B4	-5730	NM_007881	13498	Mm.333380	NM_007881	ENSMUSG00000004263	Atn1	Atr1|Drpla|atrophin-1	atrophin 1	protein-coding
common_peak2-22996-30-32-0.12528129013342-0.352152970649944	chr14	57998788	57999317	+	0	NA	intron (NM_030004, intron 2 of 7)	intron (NM_030004, intron 2 of 7)	18268	NM_030004	68631	Mm.25539	NM_030004	ENSMUSG00000021947	Cryl1	1110025H08Rik|A230106J09Rik|C85932|gul3dh	crystallin, lambda 1	protein-coding
common_peak2-23799-14-9-0.577288065470282-0.630231561310125	chr15	99850058	99850470	+	0	NA	Intergenic	Intergenic	-18831	NM_001159361	239667	Mm.243658	NM_172819	ENSMUSG00000023026	Dip2b	4932422C22|AI317237|AI854602|mKIAA1463	DIP2 disco-interacting protein 2 homolog B (Drosophila)	protein-coding
common_peak1-14961-100-178--0.247044002453467-0.782727595823912	chr3	104863722	104865702	+	0	NA	Intergenic	MLT1K|LTR|MaLR	-5050	NM_029228	75269	Mm.307994	NM_029228	ENSMUSG00000051788	4930564D02Rik	-	RIKEN cDNA 4930564D02 gene	protein-coding
unique_peak1-497-8-2-1.42025991722641-1.65811743852845	chr1	180226296	180226775	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-22749	NM_025511	66359	Mm.489720	NM_025511	ENSMUSG00000026500	Cox20	2310005N03Rik|Fam36a	COX20 Cox2 chaperone	protein-coding
common_peak1-10473-14-8-0.729291158915332-0.771068449301682	chr13	112660630	112661140	+	0	NA	Intergenic	Intergenic	-61694	NM_011945	26401	Mm.15918	NM_011945	ENSMUSG00000021754	Map3k1	MAPKKK1|MEKK1|Mekk	mitogen-activated protein kinase kinase kinase 1	protein-coding
unique_peak2-35956-2-6--1.72480917832092-1.26211192963361	chr19	12518003	12518432	+	0	NA	Intergenic	Intergenic	15822	NM_019540	56093	Mm.285849	NM_019540	ENSMUSG00000040065	Pfpl	Epcs5|Epcs50	pore forming protein-like	protein-coding
common_peak2-22876-48-69--0.158355865710152-0.360272380583625	chr14	31018446	31019860	+	0	NA	intron (NM_001083616, intron 3 of 46)	intron (NM_001083616, intron 3 of 46)	147519	NM_001083616	12289	Mm.9772	NM_028981	ENSMUSG00000015968	Cacna1d	8430418G19Rik|C79217|Cacnl1a2|Cchl1a|Cchl1a2|D-LTCC	calcium channel, voltage-dependent, L type, alpha 1D subunit	protein-coding
common_peak2-20806-7-8--0.370834171144123-1.00793137938329	chr10	127195076	127195409	+	0	NA	Intergenic	Intergenic	-1577	NM_080436	107605	Mm.484271	NM_080436	ENSMUSG00000089789	Rdh1	-	retinol dehydrogenase 1 (all trans)	protein-coding
common_peak1-10640-22-29--0.259606490521114-0.36542888694933	chr14	46787464	46788542	+	0	NA	Intergenic	L1Md_F2|LINE|L1	84301	NR_002875	218963	Mm.282093	NR_002875		Gm1821	-	ubiquitin pseudogene	pseudo
common_peak1-10534-9-6-0.382258484346616-1.11707584880836	chr14	14632157	14632681	+	0	NA	Intergenic	Intergenic	129029	NM_177624	218739	Mm.39919	NM_177624	ENSMUSG00000044772	Sntn	A430083B19Rik	sentan, cilia apical structure protein	protein-coding
common_peak1-18966-30-27-0.362320487434269-0.581176766834141	chr9	54863303	54864343	+	0	NA	exon (NM_145129, exon 5 of 6)	exon (NM_145129, exon 5 of 6)	10543	NM_145129	110834	Mm.63569	NM_145129	ENSMUSG00000032303	Chrna3	(a)3|A730007P14Rik|Acra-3|Acra3	cholinergic receptor, nicotinic, alpha polypeptide 3	protein-coding
unique_peak1-263-9-2-1.60465090568306-1.87199725847353	chr1	92751893	92752394	+	0	NA	Intergenic	Intergenic	-11595	NM_001243008	12835	Mm.7562	NM_009935	ENSMUSG00000048126	Col6a3	AI507288|Col6a-3	collagen, type VI, alpha 3	protein-coding
common_peak2-22384-9-4-0.867685311516858-1.36011389749466	chr13	31469044	31469454	+	0	NA	Intergenic	MLT1A0|LTR|MaLR	-136294	NR_045957	73924	Mm.417825	NR_045957	ENSMUSG00000087460	4930401O12Rik	-	RIKEN cDNA 4930401O12 gene	ncRNA
common_peak2-30650-16-14-0.211373046659543-0.364171515310935	chr7	99140530	99141102	+	0	NA	intron (NM_011807, intron 9 of 22)	intron (NM_011807, intron 9 of 22)	-70088	NM_001243046	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
unique_peak2-38676-11-20--0.883623838527147-0.876666802405043	chr7	100120709	100121519	+	0	NA	Intergenic	MERVL-int|LTR|ERVL	97351	NM_028243	72461	Mm.389969	NM_028243	ENSMUSG00000061119	Prcp	2510048K03Rik|2610104A14Rik|AI451719|HUMPCP|PCP	prolylcarboxypeptidase (angiotensinase C)	protein-coding
common_peak2-19975-15-6-1.20480982849805-1.32521814697968	chr1	133227157	133227586	+	0	NA	intron (NM_001081011, intron 13 of 22)	B3|SINE|B2	-51231	NM_019777	56489	Mm.386783	NM_019777	ENSMUSG00000042349	Ikbke	AW558201|IKK-i|IKKepsilon|Ikki	inhibitor of kappaB kinase epsilon	protein-coding
unique_peak2-39065-6-7--0.434601889619698-0.97990265578305	chr8	71671734	71672156	+	0	NA	Intergenic	MTEa|LTR|MaLR	-7093	NM_199364	211134	Mm.479807	NM_199364	ENSMUSG00000036306	Lzts1	F37|FEZ1	leucine zipper, putative tumor suppressor 1	protein-coding
common_peak2-22857-13-9-0.456543935750406-0.53895475198017	chr14	25825001	25825511	+	0	NA	Intergenic	Intergenic	137471	NR_045718	75862	Mm.109191	NR_045718		4930572O13Rik	-	RIKEN cDNA 4930572O13 gene	ncRNA
unique_peak2-37511-8-13--0.802132504110034-0.562038191119711	chr5	17359802	17360303	+	0	NA	intron (NM_001159558, intron 1 of 15)	intron (NM_001159558, intron 1 of 15)	-4442	NM_001159557	12491	Mm.18628	NM_007643	ENSMUSG00000002944	Cd36	FAT|GPIV|Scarb3	CD36 antigen	protein-coding
unique_peak1-661-18-8-1.14299414978604-1.45476480588849	chr10	59920154	59921005	+	0	NA	intron (NR_045556, intron 14 of 68)	intron (NR_045556, intron 14 of 68)	58105	NM_001164374	100302688	Mm.444135	NM_001164374	ENSMUSG00000090439	Gm17455	-	predicted gene, 17455	protein-coding
unique_peak2-34480-5-7--0.704380336005853-1.01466476204226	chr14	34357579	34357979	+	0	NA	Intergenic	Intergenic	-44677	NM_008978	19256	Mm.8019	NM_008978	ENSMUSG00000021940	Ptpn20	typ	protein tyrosine phosphatase, non-receptor type 20	protein-coding
unique_peak2-32701-5-12--1.40482005414695-1.62698961692433	chr1	152386053	152386606	+	0	NA	Intergenic	Intergenic	-73034	NM_001110146	96875	Mm.174256	NM_021400	ENSMUSG00000006014	Prg4	CACP|DOL54|JCAP|MSF|SZP|lubricin	proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein)	protein-coding
unique_peak1-6566-32-10-1.81966040058236-4.28341153583535	chr7	132735345	132736633	+	0	NA	Intergenic	Intergenic	-10954	NM_021887	60504	Mm.155643	NM_021887	ENSMUSG00000030745	Il21r	NILR	interleukin 21 receptor	protein-coding
unique_peak1-3888-8-1-2.00522241794757-2.05605744720049	chr2	14644788	14645227	+	0	NA	TTS (NR_028497)	TTS (NR_028497)	2738	NR_028497	625342	Mm.484784	NR_028497		Gm13315	OTTMUSG00000011384	lactate dehydrogenase A pseudogene	pseudo
common_peak2-22322-56-57-0.377614830311671-0.835692031846851	chr13	23368176	23369419	+	0	NA	Intergenic	Intergenic	-1422	NR_046038	74061	Mm.399501	NR_046038	ENSMUSG00000085122	4933404K08Rik	-	RIKEN cDNA 4933404K08 gene	ncRNA
common_peak2-20452-10-12--0.344024373132323-0.340565874754526	chr10	40521685	40522288	+	0	NA	intron (NM_177793, intron 4 of 4)	intron (NM_177793, intron 4 of 4)	80963	NM_027879	71713	Mm.46063	NM_027879	ENSMUSG00000038446	Cdc40	1200003H23Rik|EHB3|PRP17	cell division cycle 40	protein-coding
common_peak2-28133-7-8--0.370834171144123-1.00793137938329	chr4	97777171	97777542	+	0	NA	intron (NM_010905, intron 10 of 10)	intron (NM_010905, intron 10 of 10)	272600	NM_053157	94043	Mm.331719	NM_053157	ENSMUSG00000028563	Tm2d1	2310026L18Rik|AA990549|Bbp	TM2 domain containing 1	protein-coding
unique_peak2-33735-3-6--1.22133801201688-1.08602067057793	chr11	116099055	116099463	+	0	NA	exon (NM_025276, exon 1 of 22)	exon (NM_025276, exon 1 of 22)	146	NM_025276	14027	Mm.293683	NM_025276	ENSMUSG00000034282	Evpl	-	envoplakin	protein-coding
common_peak1-17400-20-17-0.318149783148881-0.440610794044987	chr7	4149086	4149946	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-33215	NM_021454	58804	Mm.34268	NM_021454	ENSMUSG00000063838	Cdc42ep5	1700027J19Rik|2010007O02Rik|Borg3|C85526|CEP5	CDC42 effector protein (Rho GTPase binding) 5	protein-coding
common_peak2-25523-93-95-0.526107362785113-2.03414581212043	chr19	5802794	5804393	+	0	NA	promoter-TSS (NR_002847)	promoter-TSS (NR_002847)	-922	NR_002847	72289	Mm.298256	NR_002847	ENSMUSG00000092341	Malat1	2210401K01Rik|9430072K23Rik|AI647968|Neat2	metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)	ncRNA
common_peak1-9223-14-13-0.0918612383000403-0.332077462497413	chr11	84068011	84068656	+	0	NA	intron (NM_133360, intron 14 of 53)	intron (NM_133360, intron 14 of 53)	59393	NM_133360	107476	Mm.31374	NM_133360	ENSMUSG00000020532	Acaca	A530025K05Rik|Acac|Acc1|Gm738	acetyl-Coenzyme A carboxylase alpha	protein-coding
common_peak2-26671-13-7-0.778472030637769-0.817533494790411	chr2	122368424	122368823	+	0	NA	Intergenic	Intergenic	57946	NM_001085518	381417	Mm.482295	NM_001085518	ENSMUSG00000079071	Gm14085	OTTMUSG00000015615	predicted gene 14085	protein-coding
unique_peak2-33897-6-9--0.75652998450706-1.11707584880836	chr12	51692945	51693299	+	0	NA	intron (NM_008858, intron 1 of 18)	intron (NM_008858, intron 1 of 18)	57088	NM_008858	18760	Mm.133719	NM_008858	ENSMUSG00000002688	Prkd1	PKD|PKD1|Pkcm|Prkcm	protein kinase D1	protein-coding
common_peak2-25002-25-45--0.661712050711907-1.05820747366651	chr18	12128250	12129582	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-129969	NR_035447	100316686		NR_035447	miRBase:MI0008328	Mir1901	Mirn1901|mmu-mir-1901	microRNA 1901	ncRNA
common_peak1-13200-11-6-0.701338662194009-1.32595962126035	chr19	21652758	21653088	+	0	NA	Intergenic	L1MD2|LINE|L1	74358	NM_025423	66206	Mm.272430	NM_025423	ENSMUSG00000035171	1110059E24Rik	-	RIKEN cDNA 1110059E24 gene	protein-coding
common_peak1-11159-27-39--0.330382143992127-0.451135909022758	chr15	75867748	75869048	+	0	NA	Intergenic	Intergenic	-23632	NM_134087	105732	Mm.267178	NM_134087	ENSMUSG00000046761	Fam83h	AA409316	family with sequence similarity 83, member H	protein-coding
unique_peak2-35121-10-10--0.103016273628528-0.301029995663987	chr16	25482586	25483134	+	0	NA	Intergenic	Intergenic	195957	NM_175165	71338	Mm.126851	NM_175165	ENSMUSG00000048399	Tprg	5430420C16Rik|Tprg1	transformation related protein 63 regulated	protein-coding
unique_peak1-3430-6-2-0.980435609659146-1.26211192963361	chr19	6483907	6484398	+	0	NA	intron (NM_001205234, intron 11 of 22)	intron (NM_001205234, intron 11 of 22)	58918	NM_009203	20521	Mm.391146	NM_009203	ENSMUSG00000061742	Slc22a12	AI987855|OAT4L|Rst|Slc22al2|URAT1	solute carrier family 22 (organic anion/cation transporter), member 12	protein-coding
unique_peak2-33315-2-5--1.50241675698448-1.08602067057793	chr11	8483881	8484181	+	0	NA	intron (NM_001083587, intron 3 of 30)	intron (NM_001083587, intron 3 of 30)	80507	NM_001083587	319939	Mm.337820	NM_001083587	ENSMUSG00000020422	Tns3	BC023928|F830010I22Rik|TEM6|Tens1	tensin 3	protein-coding
common_peak2-19662-24-37--0.454717610675869-0.572500200098104	chr1	53784218	53785174	+	0	NA	Intergenic	Intergenic	-21068	NM_001252070	627872	Mm.184692	NM_001252070	ENSMUSG00000096141	Dnah7a	Dnahc7|Dnahc7a|Gm992	dynein, axonemal, heavy chain 7A	protein-coding
common_peak2-28829-22-14-0.740393509478886-0.983972868822056	chr5	66148816	66149593	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-5556	NM_001024917	333789	Mm.332398	NM_001024917	ENSMUSG00000037795	N4bp2	B3bp|E430014I16|Gm1791|Gm868	NEDD4 binding protein 2	protein-coding
common_peak2-25034-30-40--0.187876595126211-0.346766333527252	chr18	25678924	25680177	+	0	NA	intron (NM_001146293, intron 3 of 12)	intron (NM_001146293, intron 3 of 12)	232934	NM_133195	108013	Mm.266435	NM_133195	ENSMUSG00000024268	Celf4	A230070D14Rik|BRUNOL-4|Brul4|Brunol4|C130060B05Rik	CUGBP, Elav-like family member 4	protein-coding
common_peak2-24840-12-16--0.4386868561627-0.368541233333383	chr17	74395442	74396113	+	0	NA	intron (NM_053188, intron 1 of 4)	intron (NM_053188, intron 1 of 4)	1479	NM_053188	94224	Mm.38933	NM_053188	ENSMUSG00000038541	Srd5a2	5ART2|S5AR 2	steroid 5 alpha-reductase 2	protein-coding
unique_peak1-7403-13-6-0.971117108580164-1.01572999746118	chrX	126763901	126764421	+	0	NA	intron (NM_172493, intron 23 of 26)	intron (NM_172493, intron 23 of 26)	479883	NM_172493	54004	Mm.10763	NM_017398	ENSMUSG00000034480	Diap2	Dia3|Diaph2|Drf2|E430022I22Rik	diaphanous homolog 2 (Drosophila)	protein-coding
unique_peak2-32695-6-9--0.75652998450706-1.11707584880836	chr1	149960844	149961432	+	0	NA	Intergenic	Intergenic	1616321	NM_001145807	215378	Mm.441817	NM_153539	ENSMUSG00000035131	Brinp3	B830045N13Rik|Fam5c	bone morphogenetic protein/retinoic acid inducible neural specific 3	protein-coding
common_peak2-23863-75-115--0.118914003384287-0.363644558008837	chr15	102404522	102405711	+	0	NA	intron (NM_146065, intron 2 of 10)	Lx5|LINE|L1	-49743	NR_033409	54615	Mm.445915	NM_018787	ENSMUSG00000023052	Npff	-	neuropeptide FF-amide peptide precursor	protein-coding
unique_peak2-34492-6-19--1.75652998450706-1.84350559086818	chr14	45388308	45388842	+	0	NA	Intergenic	RodERV21-int|LTR|ERV1	-43913	NM_001162954	666744	Mm.387002	NM_001162954	ENSMUSG00000091923	Gm8267	EG666744	predicted gene 8267	protein-coding
unique_peak2-39322-10-21--1.10301627362853-1.16735254179725	chr8	126536725	126537480	+	0	NA	intron (NM_133966, intron 1 of 4)	intron (NM_133966, intron 1 of 4)	8107	NM_133966	102162	Mm.291777	NM_133966	ENSMUSG00000038697	Taf5l	1110005N04Rik|AI849020	TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor	protein-coding
common_peak2-21983-10-14--0.550475250599749-0.446472590016315	chr12	51970770	51971296	+	0	NA	Intergenic	Lx|LINE|L1	-220823	NM_008858	18760	Mm.133719	NM_008858	ENSMUSG00000002688	Prkd1	PKD|PKD1|Pkcm|Prkcm	protein kinase D1	protein-coding
common_peak2-20949-4-4--0.345388608740609-0.864171920961574	chr11	12411936	12412316	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-47163	NM_001282993	12808	Mm.22847	NM_172496	ENSMUSG00000020173	Cobl	-	cordon-bleu WH2 repeat	protein-coding
common_peak1-9890-26-13-1.12054417010086-1.80107744087171	chr12	85471815	85473015	+	0	NA	intron (NM_028821, intron 5 of 7)	intron (NM_028821, intron 5 of 7)	17024	NM_027438	70481	Mm.444348	NM_027438	ENSMUSG00000054383	Pnma1	5730402C15Rik	paraneoplastic antigen MA1	protein-coding
common_peak1-18597-16-32--0.926130477090392-1.31432283146954	chr8	106622272	106623221	+	0	NA	Intergenic	Intergenic	-2779	NM_009868	12562	Mm.21767	NM_009868	ENSMUSG00000031871	Cdh5	7B4|AA408225|Cd144|VE-Cad|VECD|VEcad|Vec	cadherin 5	protein-coding
unique_peak2-39840-4-10--1.48289213249054-1.5150158574804	chrX	52971469	52971985	+	0	NA	Intergenic	Intergenic	166954	NM_001220497	100039055	Mm.380174	NM_001220497		Gm16404	EG625711	predicted gene 16404	protein-coding
common_peak2-21660-28-34--0.0763238971235038-0.304271119602326	chr11	102818379	102819264	+	0	NA	TTS (NR_037963)	TTS (NR_037963)	6647	NR_037963	69739	Mm.276539	NR_037963	ENSMUSG00000085338	2410004I01Rik	-	RIKEN cDNA 2410004I01 gene	ncRNA
unique_peak2-36108-3-13--2.22133801201688-2.36932189928148	chr2	125975920	125976614	+	0	NA	intron (NM_029455, intron 1 of 16)	intron (NM_029455, intron 1 of 16)	1473	NM_029455	75823	Mm.444732	NM_029455	ENSMUSG00000027209	Fam227b	4930525F21Rik	family with sequence similarity 227, member B	protein-coding
unique_peak2-34892-1-5--2.2120195109379-1.32905871926422	chr15	80978500	80978877	+	0	NA	intron (NM_001082536, intron 1 of 13)	MERVL-int|LTR|ERVL	42499	NM_001082536	223701	Mm.439814	NM_153049	ENSMUSG00000042292	Mkl1	AMKL|Bsac|Mal|Mrtf-A	MKL (megakaryoblastic leukemia)/myocardin-like 1	protein-coding
common_peak2-31769-28-40--0.304592884796621-0.447010559430123	chr9	21722557	21723491	+	0	NA	promoter-TSS (NM_031874)	promoter-TSS (NM_031874)	-459	NM_031874	19340	Mm.260157	NM_031874	ENSMUSG00000019066	Rab3d	C130057E11Rik	RAB3D, member RAS oncogene family	protein-coding
unique_peak2-38280-8-7-0.00522241794757061-1.00793137938329	chr6	134089588	134090037	+	0	NA	intron (NM_007961, intron 2 of 7)	MT2B|LTR|ERVL	104087	NM_007961	14011	Mm.269995	NM_007961	ENSMUSG00000030199	Etv6	AW123102|AW557856|Tel	ets variant 6	protein-coding
common_peak1-18309-91-175--0.385999673034959-1.42492082980102	chr8	46740139	46742005	+	0	NA	intron (NM_172752, intron 1 of 22)	intron (NM_172752, intron 1 of 22)	147930	NM_001205219	234214	Mm.211096	NM_172752	ENSMUSG00000031626	Sorbs2	2010203O03Rik|9430041O17Rik|A530071H08|Argbp2|mKIAA0777	sorbin and SH3 domain containing 2	protein-coding
common_peak1-17752-15-15-0.0121647505556561-0.30803596071496	chr7	83892121	83892937	+	0	NA	intron (NM_001199224, intron 20 of 22)	Lx2|LINE|L1	517756	NM_001199224	244071	Mm.322829	NM_172902	ENSMUSG00000025754	Agbl1	Ccp4|D430020F16|EG244071|Nna1-l1	ATP/GTP binding protein-like 1	protein-coding
unique_peak2-35017-6-9--0.75652998450706-1.11707584880836	chr15	102100294	102100704	+	0	NA	Intergenic	Intergenic	-9388	NM_134100	106073	Mm.287740	NM_134100	ENSMUSG00000045665	Mfsd5	AA409375|AW556797|D15Mgi27	major facilitator superfamily domain containing 5	protein-coding
common_peak1-8607-23-50--0.950657837462415-1.97528391682864	chr10	115384859	115385668	+	0	NA	Intergenic	Intergenic	-70156	NM_011217	19279	Mm.336316	NM_011217	ENSMUSG00000020151	Ptprr	Gmcp1|PTP-SL|PTPBR7|RPTPRR|mPTP213	protein tyrosine phosphatase, receptor type, R	protein-coding
unique_peak1-5523-10-2-1.77145284428761-2.09384600808989	chr5	139129022	139129478	+	0	NA	Intergenic	Intergenic	65163	NM_183025	243308	Mm.36612	NM_183025	ENSMUSG00000056014	A430033K04Rik	C86988	RIKEN cDNA A430033K04 gene	protein-coding
unique_peak2-36648-8-8--0.164702583494742-1.00793137938329	chr3	10342702	10343330	+	0	NA	intron (NM_025512, intron 6 of 7)	RLTR20D|LTR|ERVK	-7360	NM_001010834	241877	Mm.442146	NM_001010834	ENSMUSG00000058921	Slc10a5	Gm405|mP5	solute carrier family 10 (sodium/bile acid cotransporter family), member 5	protein-coding
unique_peak2-39872-3-13--2.22133801201688-2.36932189928148	chrX	74243252	74243992	+	0	NA	Intergenic	B1F1|SINE|Alu	-395359	NM_001201395	74987	Mm.107996	NM_001201395	ENSMUSG00000079525	4930468A15Rik	-	RIKEN cDNA 4930468A15 gene	protein-coding
common_peak1-18238-32-22-0.755530063162647-1.34355844763204	chr8	27259801	27261191	+	0	NA	Intergenic	ID4|SINE|ID	-8145	NM_199042	73754	Mm.383241	NM_199042		Thap1	4833431A01Rik|AW490810	THAP domain containing, apoptosis associated protein 1	protein-coding
common_peak1-10199-17-41--1.17402108457372-2.09421125609714	chr13	45964788	45965798	+	0	NA	intron (NM_009124, intron 2 of 7)	MLT1D|LTR|MaLR	95067	NM_001199304	20238	Mm.342683	NM_009124	ENSMUSG00000046876	Atxn1	2900016G23Rik|Atx1|C85907|ENSMUSG00000074917|Gm10786|Sca1	ataxin 1	protein-coding
unique_peak1-248-12-2-2.06381348436648-2.79529063155376	chr1	91092177	91092769	+	0	NA	Intergenic	Intergenic	-2346	NR_106129	102465771		NR_106129		Mir7669	mmu-mir-7669	microRNA mir-7669	ncRNA
common_peak1-17783-20-15-0.488074784591193-0.590343908676236	chr7	98161907	98162937	+	0	NA	Intergenic	Lx2A1|LINE|L1	-76874	NM_011807	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
unique_peak1-6230-13-4-1.45654393575041-2.23384849113406	chr7	4791764	4792326	+	0	NA	intron (NM_001290291, intron 1 of 4)	intron (NM_001290291, intron 1 of 4)	4253	NM_001290291	232813	Mm.44666	NM_172737	ENSMUSG00000053550	Shisa7	-	shisa homolog 7 (Xenopus laevis)	protein-coding
common_peak2-22967-9-6-0.382258484346616-1.11707584880836	chr14	54572363	54572766	+	0	NA	Intergenic	L1Md_T|LINE|L1	286949	NM_001205242	100568452	Mm.213248	NM_001205242		A430107P09Rik	Va10	RIKEN cDNA A430107P09 gene	protein-coding
common_peak1-9031-15-9-0.690236655668294-0.732381977911291	chr11	62087515	62088213	+	0	NA	intron (NM_027198, intron 2 of 4)	B3|SINE|B2	7033	NM_027198	69747	Mm.141150	NM_027198	ENSMUSG00000014243	Zswim7	2410012H22Rik	zinc finger SWIM-type containing 7	protein-coding
common_peak1-8567-44-64--0.200474978459919-0.389014771016025	chr10	95515073	95516095	+	0	NA	Intergenic	Intergenic	112287	NM_001001932	216238	Mm.210035	NM_001001932	ENSMUSG00000036499	Eea1	A430109M19Rik|B230358H09Rik|ZFYVE2	early endosome antigen 1	protein-coding
common_peak2-28326-10-13--0.450939577048835-0.386243247519795	chr4	133887384	133887976	+	0	NA	Intergenic	MTB|LTR|MaLR	-11281	NM_001039677	230810	Mm.358876	NM_001039677	ENSMUSG00000028836	Slc30a2	6030430C21|ZnT-2|Znt2	solute carrier family 30 (zinc transporter), member 2	protein-coding
unique_peak1-7203-9-1-2.18961340640422-2.31132995230379	chr9	66714413	66714955	+	0	NA	intron (NM_173413, intron 1 of 7)	MLT1L|LTR|MaLR	-32171	NM_026674	68318	Mm.284229	NM_026674	ENSMUSG00000053040	Aph1c	0610008A10Rik|APH-1b|Aph1b	anterior pharynx defective 1c homolog (C. elegans)	protein-coding
common_peak2-32045-12-16--0.4386868561627-0.368541233333383	chr9	79792929	79793593	+	0	NA	intron (NM_001081243, intron 1 of 5)	intron (NM_001081243, intron 1 of 5)	32428	NM_001081243	70598	Mm.23049	NM_001081243	ENSMUSG00000034898	Filip1	5730485H21Rik|AI843021	filamin A interacting protein 1	protein-coding
common_peak2-21813-15-26--0.742722751607812-0.823046386575433	chr11	119090456	119091309	+	0	NA	intron (NM_175430, intron 1 of 18)	intron (NM_175430, intron 1 of 18)	996	NM_175430	207607	Mm.189885	NM_175430	ENSMUSG00000039963	Ccdc40	B930008I02Rik	coiled-coil domain containing 40	protein-coding
unique_peak1-4337-13-3-1.77847203063777-2.58603100924543	chr2	153175815	153176365	+	0	NA	intron (NM_001039939, intron 1 of 11)	intron (NM_001039939, intron 1 of 11)	4215	NM_001039939	228790	Mm.330677	NM_001039939	ENSMUSG00000042548	Asxl1	mKIAA0978	additional sex combs like 1	protein-coding
common_peak1-10436-39-49--0.0280949428555708-0.301029995663988	chr13	102898332	102899622	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-360805	NM_001077495	18708	Mm.259333	NM_001024955	ENSMUSG00000041417	Pik3r1	PI3K|p50alpha|p55alpha|p85alpha	phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)	protein-coding
common_peak2-24412-14-22--0.624345795699369-0.590343908676233	chr17	15499745	15500470	+	0	NA	Intergenic	Intergenic	-8682	NR_033511	100038481	Mm.387544	NR_033511		Gm10510	ENSMUSG00000073453	predicted gene 10510	ncRNA
common_peak1-12524-56-70-0.085848705934561-0.338476598245404	chr18	61176220	61177900	+	0	NA	Intergenic	Intergenic	-3207	NM_201353	240332	Mm.39846	NM_201353	ENSMUSG00000052026	Slc6a7	AW455934|PROT	solute carrier family 6 (neurotransmitter transporter, L-proline), member 7	protein-coding
unique_peak1-2675-9-6-0.382258484346616-1.11707584880836	chr16	57754629	57755157	+	0	NA	promoter-TSS (NM_007739)	promoter-TSS (NM_007739)	-43	NM_007739	12837	Mm.130388	NM_007739	ENSMUSG00000068196	Col8a1	Col8a-1	collagen, type VIII, alpha 1	protein-coding
common_peak2-28492-40-42-0.232710928049-0.490454554604827	chr4	155943706	155944686	+	0	NA	Intergenic	Intergenic	-335230	NM_198305	231003	Mm.423038	NM_198305	ENSMUSG00000078484	Klhl17	AL022703|BC058738	kelch-like 17	protein-coding
unique_peak1-2812-7-5-0.214128329577033-1.01466476204226	chr17	24895234	24895708	+	0	NA	exon (NM_001012402, exon 2 of 2)	exon (NM_001012402, exon 2 of 2)	5523	NM_001012402	328779	Mm.328848	NM_001012402	ENSMUSG00000039628	Hs3st6	-	heparan sulfate (glucosamine) 3-O-sulfotransferase 6	protein-coding
unique_peak2-35085-5-8--0.874305337448166-1.10484139239135	chr16	17740638	17741103	+	0	NA	Intergenic	RMER10A|LTR|ERVL	-17830	NM_001040683	94112	Mm.208970	NM_033609	ENSMUSG00000012114	Med15	A230074L19Rik|AW536074|Pcqap|mPcqap	mediator complex subunit 15	protein-coding
unique_peak1-3449-9-1-2.18961340640422-2.31132995230379	chr19	7592727	7593209	+	0	NA	intron (NM_146091, intron 4 of 12)	intron (NM_146091, intron 4 of 12)	24040	NM_146091	109168	Mm.264016	NM_146091	ENSMUSG00000024759	Atl3	4633402C03Rik|5730596K20Rik|AI465397|AW228836	atlastin GTPase 3	protein-coding
unique_peak1-5823-11-5-0.923731083530457-1.477227296591	chr6	72215165	72215658	+	0	NA	Intergenic	HAL1|LINE|L1	-29840	NM_153778	71093	Mm.87449	NM_153778	ENSMUSG00000037621	Atoh8	4933425C05Rik|Hath6|Math6|bHLHa21|okadin	atonal homolog 8 (Drosophila)	protein-coding
unique_peak1-5389-11-6-0.701338662194009-1.32595962126035	chr5	103620398	103620999	+	0	NA	intron (NM_001081567, intron 2 of 13)	intron (NM_001081567, intron 2 of 13)	19655	NM_001081567	26414	Mm.39253	NM_009158	ENSMUSG00000046709	Mapk10	C230008H04Rik|JNK3|JNK3B1|JNK3B2|SAPK(beta)|Serk2|p493F12|p54bSAPK	mitogen-activated protein kinase 10	protein-coding
common_peak2-24571-9-9--0.132314688483142-1.03275496310833	chr17	29485266	29485743	+	0	NA	promoter-TSS (NM_019880)	promoter-TSS (NM_019880)	-655	NM_019880	56462	Mm.285322	NM_019880	ENSMUSG00000024012	Mtch1	2310034O17Rik|AI255158|AU018396|C77849|PSAP	mitochondrial carrier homolog 1 (C. elegans)	protein-coding
common_peak2-28479-14-22--0.624345795699369-0.590343908676233	chr4	155488443	155489034	+	0	NA	intron (NM_177205, intron 2 of 9)	B3|SINE|B2	4631	NM_177205	230996	Mm.318925	NM_145557	ENSMUSG00000059939	9430015G10Rik	-	RIKEN cDNA 9430015G10 gene	protein-coding
common_peak2-20980-11-5-0.923731083530457-1.477227296591	chr11	20958149	20958571	+	0	NA	Intergenic	Intergenic	-32967	NM_023324	67245	Mm.28957	NM_023324	ENSMUSG00000020134	Peli1	2810468L03Rik|A930031K15Rik|AA409794|AI586297|D11Ertd676e	pellino 1	protein-coding
common_peak1-15361-6-6--0.241956811677302-0.947717972411649	chr4	57915314	57915714	+	0	NA	Intergenic	Intergenic	13622	NM_178727	242484	Mm.23214	NM_178727	ENSMUSG00000052117	D630039A03Rik	-	RIKEN cDNA D630039A03 gene	protein-coding
unique_peak1-360-10-4-1.03448725012141-1.5150158574804	chr1	138349690	138350232	+	0	NA	Intergenic	MIR|SINE|MIR	-14464	NM_001287179	381293	Mm.458468	NM_001081258	ENSMUSG00000041498	Kif14	D1Ertd367e|E130203M01	kinesin family member 14	protein-coding
unique_peak2-33197-9-8-0.0196884049619079-1.03275496310833	chr10	110920295	110920853	+	0	NA	intron (NM_015781, intron 2 of 15)	intron (NM_015781, intron 2 of 15)	2901	NM_001146707	53605	Mm.290407	NM_015781	ENSMUSG00000058799	Nap1l1	AA407126|AI256722|D10Ertd68e|NAP-1	nucleosome assembly protein 1-like 1	protein-coding
common_peak2-27867-15-12-0.311725032414564-0.425539671739611	chr3	159192766	159193370	+	0	NA	TTS (NM_029523)	TTS (NM_029523)	34671	NM_001172093	76131	Mm.371655	NM_029523	ENSMUSG00000028175	Depdc1a	5830484J08Rik|Depdc1	DEP domain containing 1a	protein-coding
common_peak2-25995-28-19-0.7310310249341-1.12969433525548	chr19	55257538	55258196	+	0	NA	intron (NM_009348, intron 2 of 9)	intron (NM_009348, intron 2 of 9)	2492	NM_009348	21684	Mm.42139	NM_009348	ENSMUSG00000024979	Tectb	Tctnb	tectorin beta	protein-coding
common_peak2-22936-10-11--0.228547155712387-0.31137425193576	chr14	47367185	47367782	+	0	NA	Intergenic	L1Md_T|LINE|L1	-12733	NM_028222	72391	Mm.272394	NM_028222	ENSMUSG00000037628	Cdkn3	2410006H10Rik|KAP	cyclin-dependent kinase inhibitor 3	protein-coding
common_peak1-9228-8-13--0.802132504110034-0.562038191119711	chr11	84513650	84514104	+	0	NA	Intergenic	Intergenic	20057	NR_046197	78471	Mm.47152	NR_046197	ENSMUSG00000085044	1700109G15Rik	-	RIKEN cDNA 1700109G15 gene	ncRNA
common_peak2-28783-11-10-0.0492619656143161-0.31137425193576	chr5	62765749	62766328	+	0	NA	Intergenic	L1_Mur3|LINE|L1	391378	NM_178407	212285	Mm.244403	NM_178407	ENSMUSG00000037999	Arap2	Centd1|Gm148|mKIAA0580	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2	protein-coding
common_peak2-25028-27-46--0.563042900782402-0.849650211186454	chr18	25168465	25169587	+	0	NA	intron (NM_001289654, intron 10 of 24)	intron (NM_001289654, intron 10 of 24)	155440	NM_001142697	66648	Mm.263189	NM_001004361	ENSMUSG00000024269	Tpgs2	5730437P09Rik|5730494M16Rik|AI666318|Pgs2	tubulin polyglutamylase complex subunit 2	protein-coding
common_peak1-11512-83-82-0.539183193759202-1.93818912282518	chr16	22264842	22266815	+	0	NA	exon (NM_009186, exon 1 of 9)	exon (NM_009186, exon 1 of 9)	174	NM_009186	20462	Mm.210352	NM_009186		Tra2b	5730405G21Rik|D16Ertd266e|SIG-41|Sfrs10|Silg41|TRA2beta	transformer 2 beta homolog (Drosophila)	protein-coding
unique_peak2-36396-2-8--2.08737925770563-1.65811743852845	chr2	121509662	121510117	+	0	NA	intron (NM_172673, intron 1 of 14)	(CAAAA)n|Simple_repeat|Simple_repeat	122904	NM_172673	228564	Mm.121514	NM_172673	ENSMUSG00000027238	Frmd5	1500032A09Rik|5830442F04|A930004K21Rik|R75430	FERM domain containing 5	protein-coding
common_peak2-31278-16-7-1.11826364226806-1.23399803405144	chr8	71882091	71882452	+	0	NA	Intergenic	L1Md_F|LINE|L1	37172	NR_038044	378466	Mm.37846	NM_194351		Gm10033	9330175B10Rik|ENSMUSG00000057924|ENSMUSG00000071083|Gm10311	predicted gene 10033	ncRNA
common_peak1-15166-16-14-0.211373046659543-0.364171515310935	chr3	151350965	151351806	+	0	NA	Intergenic	L1Md_F3|LINE|L1	61538	NM_133871	99899	Mm.30756	NM_133871	ENSMUSG00000028037	Ifi44	A430056A10Rik|AW261460|MTAP44|p44	interferon-induced protein 44	protein-coding
unique_peak2-38714-8-23--1.57974008277359-1.94520747672513	chr7	110702390	110703152	+	0	NA	3' UTR (NM_147100, exon 1 of 1)	3' UTR (NM_147100, exon 1 of 1)	3889	NM_147100	259104	Mm.424091	NM_147100	ENSMUSG00000078624	Olfr613	MOR20-1|Olfr613-ps1|Olfr614	olfactory receptor 613	protein-coding
unique_peak1-1894-8-1-2.00522241794757-2.05605744720049	chr14	65335763	65336237	+	0	NA	intron (NM_001081177, intron 5 of 39)	intron (NM_001081177, intron 5 of 39)	64632	NM_001081177	16554	Mm.23611	NM_001081177	ENSMUSG00000060012	Kif13b	5330429L19Rik|6030414C01|AI429803|C130021D12Rik|GAKIN	kinesin family member 13B	protein-coding
common_peak2-28025-24-19-0.471281807880354-0.677583764578261	chr4	52438621	52439168	+	0	NA	Intergenic	Lx3C|LINE|L1	12942	NR_045175	72648	Mm.391869	NR_045175	ENSMUSG00000085763	Smc2os	2700081L22Rik	structural maintenance of chromosomes 2, opposite strand	ncRNA
common_peak2-23763-15-25--0.688274967585436-0.73354163167379	chr15	98145060	98145767	+	0	NA	Intergenic	B4A|SINE|B4	-1434	NM_001011778	257943	Mm.309892	NM_001011778	ENSMUSG00000062037	Olfr285	MOR160-3	olfactory receptor 285	protein-coding
common_peak2-22417-9-9--0.132314688483142-1.03275496310833	chr13	36697494	36697942	+	0	NA	Intergenic	Intergenic	128628	NM_153529	68404	Mm.232930	NM_153529	ENSMUSG00000039114	Nrn1	0710008J23Rik|Cpg15|Nrn	neuritin 1	protein-coding
unique_peak1-6627-13-3-1.77847203063777-2.58603100924543	chr8	8649008	8649666	+	0	NA	intron (NM_010111, intron 1 of 4)	intron (NM_010111, intron 1 of 4)	11436	NM_010111	13642	Mm.209813	NM_010111	ENSMUSG00000001300	Efnb2	ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1	ephrin B2	protein-coding
common_peak1-15506-21-35--0.600435736176077-0.748982406290541	chr4	116463448	116464456	+	0	NA	intron (NM_146151, intron 4 of 10)	AT_rich|Low_complexity|Low_complexity	16212	NM_026654	68276	Mm.30534	NM_026654	ENSMUSG00000028688	Toe1	4930584N22Rik|4933424D16Rik|AI413517	target of EGR1, member 1 (nuclear)	protein-coding
common_peak1-14918-10-9-0.0344872501214071-1.05503135781948	chr3	98338972	98339590	+	0	NA	Intergenic	L1_Mm|LINE|L1	-24791	NM_008294	15495	Mm.14309	NM_008294	ENSMUSG00000095143	Hsd3b4	-	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 4	protein-coding
common_peak1-13979-12-10-0.189344366450341-0.386243247519795	chr2	101886226	101886824	+	0	NA	intron (NM_178886, intron 4 of 5)	intron (NM_178886, intron 4 of 5)	140092	NM_178886	241576	Mm.489740	NM_178886	ENSMUSG00000048058	Ldlrad3	6430500P08|AI194318|Lrad3	low density lipoprotein receptor class A domain containing 3	protein-coding
common_peak2-26746-28-40--0.304592884796621-0.447010559430123	chr2	132846635	132847547	+	0	NA	Intergenic	Intergenic	-75319	NM_198029	241639	Mm.209784	NM_198029	ENSMUSG00000027356	Fermt1	5830467P10Rik|Kindlin-1	fermitin family homolog 1 (Drosophila)	protein-coding
common_peak1-10441-32-32-0.234697899861207-0.451135909022752	chr13	104015854	104017103	+	0	NA	intron (NM_175171, intron 1 of 28)	intron (NM_175171, intron 1 of 28)	108094	NM_175171	328329	Mm.202606	NM_175171	ENSMUSG00000034751	Mast4	4930420O11Rik|AI642422|mKIAA0303	microtubule associated serine/threonine kinase family member 4	protein-coding
unique_peak2-37372-3-6--1.22133801201688-1.08602067057793	chr4	137858330	137858758	+	0	NA	TTS (NM_001190978)	TTS (NM_001190978)	-2109	NM_007838	13200	Mm.7236	NM_007838	ENSMUSG00000028757	Ddost	-	dolichyl-di-phosphooligosaccharide-protein glycotransferase	protein-coding
common_peak2-28648-8-13--0.802132504110034-0.562038191119711	chr5	30869573	30869941	+	0	NA	Intergenic	Intergenic	-20786	NM_010608	16527	Mm.439936	NM_010608	ENSMUSG00000049265	Kcnk3	TASK|Task-1|cTBAK-1	potassium channel, subfamily K, member 3	protein-coding
common_peak2-29063-14-8-0.729291158915332-0.771068449301682	chr5	117278631	117279070	+	0	NA	Intergenic	Intergenic	-237024	NM_026886	68955	Mm.146779	NM_026886	ENSMUSG00000063919	Srrm4	1500001A10Rik|B230202K19Rik|bv|mKIAA1853|nSR100	serine/arginine repetitive matrix 4	protein-coding
common_peak1-17479-9-7-0.18961340640422-1.05908390183068	chr7	24399553	24400003	+	0	NA	Intergenic	L1VL4|LINE|L1	8584	NM_001166722	546944	Mm.480274	NM_001166722	ENSMUSG00000094187	Vmn1r170	EG546944|Gm5999	vomeronasal 1 receptor 170	protein-coding
common_peak2-27853-15-17--0.157760250886656-0.307611222530528	chr3	152511828	152512686	+	0	NA	intron (NM_012028, intron 2 of 4)	Lx2|LINE|L1	132914	NM_012028	26938	Mm.40915	NM_012028		St6galnac5	AI851940|Siat7e	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	protein-coding
common_peak1-17138-19-23--0.18227517405947-0.320777457303847	chr6	116192636	116193468	+	0	NA	intron (NM_026585, intron 20 of 30)	intron (NM_026585, intron 20 of 30)	-21185	NM_001290338	67492	Mm.272772	NM_001081317	ENSMUSG00000042213	Zfand4	Anubl1	zinc finger, AN1-type domain 4	protein-coding
common_peak2-23533-17-17-0.0483713367627256-0.325169893479371	chr15	77876457	77877397	+	0	NA	intron (NM_007583, intron 1 of 3)	intron (NM_007583, intron 1 of 3)	72783	NM_007583	12300	Mm.277338	NM_007583		Cacng2	AW060990|B230105C07Rik|B930041E13Rik|stargazer|stargazin|stg|wag|waggler	calcium channel, voltage-dependent, gamma subunit 2	protein-coding
common_peak1-12530-13-9-0.456543935750406-0.53895475198017	chr18	79003610	79004347	+	0	NA	intron (NM_053099, intron 4 of 5)	intron (NM_053099, intron 4 of 5)	-210289	NM_030683	27411	Mm.44158	NM_030683	ENSMUSG00000024552	Slc14a2	UT-A1|UT-A3	solute carrier family 14 (urea transporter), member 2	protein-coding
common_peak1-16249-31-64--0.797129142215331-1.88758293112677	chr5	104508143	104509093	+	0	NA	intron (NM_010097, intron 10 of 10)	(TAAA)n|Simple_repeat|Simple_repeat	-1991	NM_001163772	100271704	Mm.366664	NM_001163772	ENSMUSG00000091034	Gm17660	Scpppq1	predicted gene, 17660	protein-coding
common_peak2-29995-56-56-0.402705811274502-0.901543963465162	chr6	124414216	124416149	+	0	NA	promoter-TSS (NM_153508)	promoter-TSS (NM_153508)	-380	NM_153508	232370	Mm.193701	NM_153508	ENSMUSG00000008153	Clstn3	CSTN3|Cs3|Cst-3|mKIAA0726	calsyntenin 3	protein-coding
unique_peak2-35614-1-9--2.94898510510411-2.31132995230379	chr17	84123198	84123578	+	0	NA	intron (NM_001171053, intron 3 of 13)	B3A|SINE|B2	17885	NM_001171052	116871	Mm.277668	NM_054082	ENSMUSG00000055817	Mta3	1110002J22Rik|mKIAA1266	metastasis associated 3	protein-coding
common_peak2-30800-27-31--0.00845404910476422-0.304476922018591	chr7	127448324	127449202	+	0	NA	intron (NM_026458, intron 24 of 30)	L1Md_F2|LINE|L1	-23435	NM_177213	320631	Mm.78330	NM_177213	ENSMUSG00000054746	Abca15	4930500I12Rik	ATP-binding cassette, sub-family A (ABC1), member 15	protein-coding
common_peak2-22538-10-14--0.550475250599749-0.446472590016315	chr13	56021370	56022038	+	0	NA	Intergenic	Intergenic	-88918	NM_011097	18740	Mm.135195	NM_011097	ENSMUSG00000021506	Pitx1	Bft|P-OTX|Potx|Ptx1	paired-like homeodomain transcription factor 1	protein-coding
unique_peak2-39534-4-9--1.34538860874061-1.36011389749466	chr9	66974867	66975359	+	0	NA	Intergenic	Intergenic	-6255	NR_045748	100502636	Mm.412607	NR_045748		Gm19299	-	predicted gene, 19299	ncRNA
unique_peak1-3219-13-0-3.77847203063777-4.51544993495972	chr18	59197901	59198580	+	0	NA	intron (NM_175506, intron 21 of 22)	intron (NM_175506, intron 21 of 22)	-23795	NR_033764	225583	Mm.209711	NM_173759	ENSMUSG00000050875	A730017C20Rik	-	RIKEN cDNA A730017C20 gene	protein-coding
common_peak1-12466-11-11--0.0762689164695427-0.301029995663976	chr17	84083987	84084497	+	0	NA	Intergenic	MTB|LTR|MaLR	-21261	NM_001171054	116871	Mm.277668	NM_054082	ENSMUSG00000055817	Mta3	1110002J22Rik|mKIAA1266	metastasis associated 3	protein-coding
unique_peak2-34362-1-7--2.62705701021674-1.80617997398389	chr13	104286653	104287030	+	0	NA	Intergenic	Intergenic	-162269	NM_175171	328329	Mm.202606	NM_175171	ENSMUSG00000034751	Mast4	4930420O11Rik|AI642422|mKIAA0303	microtubule associated serine/threonine kinase family member 4	protein-coding
common_peak2-21771-45-64--0.162009787683583-0.365132085969548	chr11	116852292	116853726	+	0	NA	Intergenic	LTR37A|LTR|ERV1	72832	NM_172948	268510	Mm.35141	NM_172948	ENSMUSG00000043857	Mgat5b	C330018B01|GnT-IX|mGnTVB	mannoside acetylglucosaminyltransferase 5, isoenzyme B	protein-coding
common_peak1-9378-12-24--0.995080204687086-1.0220094258199	chr11	98412381	98413013	+	0	NA	5' UTR (NM_001166494, exon 1 of 7)	5' UTR (NM_001166494, exon 1 of 7)	286	NM_001166494	69376	Mm.55996	NM_027061	ENSMUSG00000017195	Zpbp2	1700017D11Rik|2610022C02Rik|ZPBPL	zona pellucida binding protein 2	protein-coding
unique_peak1-2995-11-1-2.50869358425161-2.83420869758413	chr17	83217856	83218418	+	0	NA	Intergenic	Intergenic	259428	NR_045094	100503434	Mm.187281	NR_045094		Gm19689	-	predicted gene, 19689	ncRNA
common_peak1-16574-33-25-0.630897844384437-1.05951140195658	chr5	146910795	146912112	+	0	NA	intron (NM_001105160, intron 9 of 12)	intron (NM_001105160, intron 9 of 12)	20619	NM_001105160	100041449	Mm.301900	NM_001105160	ENSMUSG00000061292	Cyp3a59	ENSMUSG00000061292	cytochrome P450, family 3, subfamily a, polypeptide 59	protein-coding
common_peak2-21719-18-35--0.857005850213961-1.20071330053878	chr11	110336828	110337905	+	0	NA	intron (NM_011943, intron 1 of 11)	(GA)n|Simple_repeat|Simple_repeat	76930	NM_011943	26399	Mm.14487	NM_011943	ENSMUSG00000020623	Map2k6	MEK6|MKK6|Prkmk6|SAPKK3	mitogen-activated protein kinase kinase 6	protein-coding
common_peak2-23279-13-9-0.456543935750406-0.53895475198017	chr15	27597702	27598128	+	0	NA	intron (NM_001242423, intron 1 of 7)	intron (NM_001242423, intron 1 of 7)	13382	NM_001242424	223433	Mm.266485	NM_198301	ENSMUSG00000056069	Fam105a	9830126M18	family with sequence similarity 105, member A	protein-coding
common_peak1-16169-55-27-1.3972649490951-5.2385696980641	chr5	88720161	88721913	+	0	NA	Intergenic	ETnERV2-int|LTR|ERVK	23093	NM_001110779	665615	Mm.366701	NM_001110779	ENSMUSG00000090302	Gm7714	EG665615	predicted gene 7714	protein-coding
unique_peak2-38930-5-9--1.02630843089322-1.21398586181642	chr8	22879331	22879802	+	0	NA	Intergenic	Intergenic	-7461	NM_007843	13214	Mm.431316	NM_007843	ENSMUSG00000044748	Defb1	AW260221|BD-1	defensin beta 1	protein-coding
common_peak1-18937-76-95-0.176981885142125-0.509825734201316	chr9	45953837	45955750	+	0	NA	intron (NM_027498, intron 3 of 24)	MTE2b-int|LTR|MaLR	-81920	NM_009692	11806	Mm.26743	NM_009692	ENSMUSG00000032083	Apoa1	Alp-1|Apoa-1|Brp-14|Ltw-1|Lvtw-1|Sep-1|Sep-2|Sep2|apo-AI|apoA-I	apolipoprotein A-I	protein-coding
common_peak1-17241-40-43-0.199544064113801-0.449053920623498	chr6	128423990	128425310	+	0	NA	non-coding (NR_028592, exon 3 of 3)	non-coding (NR_028592, exon 3 of 3)	35875	NR_028592	791299	Mm.297516	NR_028592	ENSMUSG00000059659	Gm10069	ENSMUSG00000059659	predicted gene 10069	ncRNA
unique_peak1-5089-15-8-0.842239749113344-0.891319708951327	chr4	148040013	148040615	+	0	NA	intron (NM_001085505, intron 6 of 10)	intron (NM_001085505, intron 6 of 10)	22888	NM_001085505	230909	Mm.332067	NM_001085505	ENSMUSG00000070577	Gm572	b2b1167Clo	predicted gene 572	protein-coding
common_peak1-10803-31-36-0.0157853051841732-0.304004708442489	chr14	77036072	77037159	+	0	NA	Intergenic	Intergenic	-40760	NR_015485	73272	Mm.116804	NR_015485		1700108F19Rik	1700020I02Rik|BB065030	RIKEN cDNA 1700108F19 gene	ncRNA
unique_peak2-32682-2-8--2.08737925770563-1.65811743852845	chr1	138343034	138343461	+	0	NA	Intergenic	Intergenic	-21178	NM_001287179	381293	Mm.458468	NM_001081258	ENSMUSG00000041498	Kif14	D1Ertd367e|E130203M01	kinesin family member 14	protein-coding
unique_peak1-6046-9-1-2.18961340640422-2.31132995230379	chr6	115351311	115351932	+	0	NA	intron (NM_001127330, intron 2 of 7)	Lx3C|LINE|L1	-20463	NM_011146	19016	Mm.3020	NM_011146	ENSMUSG00000000440	Pparg	Nr1c3|PPAR-gamma|PPAR-gamma2|PPARgamma|PPARgamma2	peroxisome proliferator activated receptor gamma	protein-coding
common_peak2-25312-5-6--0.511735258063458-0.947717972411649	chr18	75318941	75319333	+	0	NA	intron (NM_027727, intron 13 of 16)	B3|SINE|B2	137834	NR_045394	100503117	Mm.250517	NR_045393		2010010A06Rik	5033420E22Rik	RIKEN cDNA 2010010A06 gene	ncRNA
common_peak1-9469-87-81-0.638085101163085-2.61588793632355	chr11	104549452	104550773	+	0	NA	Intergenic	Lx8|LINE|L1	80798	NM_016780	16416	Mm.87150	NM_016780	ENSMUSG00000020689	Itgb3	CD61|GP3A|INGRB3	integrin beta 3	protein-coding
unique_peak1-2744-7-3-0.799090830298189-1.23214870625617	chr17	33865560	33866084	+	0	NA	Intergenic	Intergenic	-10200	NR_045522	224703	Mm.311439	NM_145486	ENSMUSG00000079557	March2	9530046H09Rik|MARCH-II	membrane-associated ring finger (C3HC4) 2	protein-coding
common_peak1-10541-11-11--0.0762689164695427-0.301029995663976	chr14	17918538	17919056	+	0	NA	Intergenic	RLTR13D6|LTR|ERVK	-3952	NM_001289761	218772	Mm.259318	NM_011243	ENSMUSG00000017491	Rarb	A830025K23|Hap|Nr1b2	retinoic acid receptor, beta	protein-coding
common_peak2-27063-16-14-0.211373046659543-0.364171515310935	chr2	181592294	181592970	+	0	NA	TTS (NM_001291211)	TTS (NM_001291211)	-6433	NM_025901	67005	Mm.271986	NM_025901	ENSMUSG00000038628	Polr3k	12.3kDa|1500004O14Rik|AI196849|AU014893|C11|RPC10|RPC11	polymerase (RNA) III (DNA directed) polypeptide K	protein-coding
common_peak1-16835-26-16-0.840436250908123-1.24110690293937	chr6	50684068	50685019	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-41571	NR_045984	319981	Mm.131454	NR_045984		C530044C16Rik	-	RIKEN cDNA C530044C16 gene	ncRNA
unique_peak2-36959-1-4--1.94898510510411-1.10720996964787	chr3	108765907	108766216	+	0	NA	Intergenic	Intergenic	22586	NM_001078646	66715	Mm.158124	NM_025723	ENSMUSG00000045662	Henmt1	4921515J06Rik|Hen1|mHEN1	HEN1 methyltransferase homolog 1 (Arabidopsis)	protein-coding
common_peak2-23417-40-56--0.173914331413643-0.351783812734557	chr15	59822630	59823583	+	0	NA	Intergenic	Intergenic	25067	NM_027668	71088	Mm.425950	NM_027668	ENSMUSG00000071749	4933412E24Rik	-	RIKEN cDNA 4933412E24 gene	protein-coding
common_peak1-16309-13-6-0.971117108580164-1.01572999746118	chr5	114719341	114719925	+	0	NA	intron (NM_148935, intron 2 of 9)	intron (NM_148935, intron 2 of 9)	4137	NM_148935	116810	Mm.17709	NM_148935	ENSMUSG00000042002	Foxn4	-	forkhead box N4	protein-coding
common_peak1-12996-29-25-0.411850362474019-0.664636481544818	chr19	4333172	4334087	+	0	NA	intron (NM_001001984, intron 12 of 20)	intron (NM_001001984, intron 12 of 20)	-27407	NM_001290818	110355	Mm.254144	NM_130863	ENSMUSG00000024858	Adrbk1	Adrbk-1|Bark-1|GRK2|beta ARK|betaARK1	adrenergic receptor kinase, beta 1	protein-coding
unique_peak2-38927-4-6--0.830815435910851-0.989110657569874	chr8	22536960	22537213	+	0	NA	Intergenic	Intergenic	29903	NM_001177518	665927	Mm.422762	NM_001177518	ENSMUSG00000079114	Gm7849	EG665927	predicted gene 7849	protein-coding
common_peak2-30728-10-6-0.549060422951165-1.21398586181642	chr7	115999712	116000146	+	0	NA	Intergenic	Lx|LINE|L1	-10407	NM_146725	258720	Mm.377654	NM_146725	ENSMUSG00000062434	Olfr516	MOR268-2	olfactory receptor 516	protein-coding
unique_peak1-1355-23-9-1.39983940962172-2.17218792383888	chr12	21542773	21543845	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-120012	NM_011739	22630	Mm.289630	NM_011739	ENSMUSG00000076432	Ywhaq	2700028P07Rik|AA409740|AU021156|R74690	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide	protein-coding
unique_peak1-2107-8-1-2.00522241794757-2.05605744720049	chr15	39671175	39671603	+	0	NA	intron (NM_001164466, intron 4 of 9)	MLT1D|LTR|MaLR	17627	NM_001164466	64705	Mm.275974	NM_022722	ENSMUSG00000022304	Dpys	1200017I10Rik|1300004I01Rik|DHP|DHPase	dihydropyrimidinase	protein-coding
common_peak2-21632-12-15--0.351224014912361-0.332077462497413	chr11	101225872	101226548	+	0	NA	Intergenic	Intergenic	-2834	NM_008061	14377	Mm.18064	NM_008061	ENSMUSG00000078650	G6pc	AW107337|G6Pase|G6pt|Glc-6-Pase	glucose-6-phosphatase, catalytic	protein-coding
common_peak2-22674-15-6-1.20480982849805-1.32521814697968	chr13	97249349	97249774	+	0	NA	Intergenic	MTD|LTR|MaLR	-8446	NM_001042714	271144	Mm.470057	NM_001042714	ENSMUSG00000047117	Ankdd1b	9330128J19Rik	ankyrin repeat and death domain containing 1B	protein-coding
unique_peak1-6941-7-4-0.477162735410827-1.09384600808989	chr8	110217123	110217563	+	0	NA	Intergenic	Intergenic	-104961	NM_010817	17463	Mm.18347	NM_010817	ENSMUSG00000039067	Psmd7	AW107203|Mov-34|Mov34	proteasome (prosome, macropain) 26S subunit, non-ATPase, 7	protein-coding
common_peak1-16757-52-41-0.715942567486938-1.86585953767694	chr6	34597600	34599335	+	0	NA	Intergenic	Intergenic	-60977	NM_145575	109624	Mm.308134	NM_145575	ENSMUSG00000029761	Cald1	4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik	caldesmon 1	protein-coding
unique_peak1-4831-12-3-1.64877598508764-2.36932189928148	chr3	146473407	146474017	+	0	NA	intron (NM_011100, intron 1 of 9)	intron (NM_011100, intron 1 of 9)	2198	NM_011100	18749	Mm.16766	NM_011100	ENSMUSG00000005034	Prkacb	Pkacb	protein kinase, cAMP dependent, catalytic, beta	protein-coding
unique_peak2-37389-2-4--1.23938235115068-0.931118710592187	chr4	140661394	140661809	+	0	NA	intron (NM_177867, intron 10 of 14)	intron (NM_177867, intron 10 of 14)	17341	NM_177867	329972	Mm.247201	NM_177867	ENSMUSG00000045004	Spata21	4933414G08	spermatogenesis associated 21	protein-coding
unique_peak1-1585-12-7-0.648775985087639-0.697979855752659	chr13	33140841	33141540	+	0	NA	Intergenic	RMER17A-int|LTR|ERVK	21907	NM_011452	20706	Mm.45371	NM_011452		Serpinb9b	1600019A21Rik|R86|SPI-CI|Spi10|ovalbumin	serine (or cysteine) peptidase inhibitor, clade B, member 9b	protein-coding
common_peak2-23761-15-10-0.552733131918359-0.604422558181019	chr15	98050210	98050844	+	0	NA	intron (NM_001011780, intron 1 of 2)	B1_Mus1|SINE|Alu	960	NM_001011780	634104	Mm.259785	NM_001011780	ENSMUSG00000090129	Olfr287	MOR286-1	olfactory receptor 287	protein-coding
unique_peak2-35150-3-4--0.73591118484664-0.864171920961574	chr16	32728822	32729142	+	0	NA	Intergenic	MLT1B|LTR|MaLR	-6990	NM_080457	140474	Mm.214599	NM_080457	ENSMUSG00000079620	Muc4	4933405I11Rik|Asgp	mucin 4	protein-coding
common_peak1-12738-28-18-0.805031606377877-1.27334590136207	chr18	54990259	54991094	+	0	NA	Intergenic	B3|SINE|B2	159158	NM_175751	269023	Mm.192984	NM_175751	ENSMUSG00000052713	Zfp608	4932417D18Rik|D430007A19Rik|Znf608	zinc finger protein 608	protein-coding
common_peak2-22056-42-28-0.884348332739612-2.12244165266811	chr12	70706560	70707493	+	0	NA	intron (NM_001135559, intron 14 of 22)	intron (NM_001135559, intron 14 of 22)	-23011	NM_001033236	207965	Mm.102487	NM_001033236	ENSMUSG00000049882	Vcpkmt	Gm71|Mettl21d|Mettl221d|VCP-KMT	valosin containing protein lysine (K) methyltransferase	protein-coding
unique_peak1-5948-29-8-1.9423650791728-4.27327766748815	chr6	91199948	91201050	+	0	NA	intron (NM_001081437, intron 2 of 16)	intron (NM_001081437, intron 2 of 16)	37741	NM_007992	14115	Mm.249146	NM_007992	ENSMUSG00000064080	Fbln2	5730577E14Rik|FIBL-2	fibulin 2	protein-coding
common_peak1-13866-36-25-0.778881368026663-1.55933022783608	chr2	69884934	69886221	+	0	NA	intron (NM_177376, intron 2 of 34)	MER102a|DNA|MER1_type	8394	NM_177376	329421	Mm.99648	NM_177376	ENSMUSG00000042064	Myo3b	A430065P19Rik	myosin IIIB	protein-coding
common_peak1-13269-49-67--0.0811790182251553-0.315949812664558	chr19	36409415	36410514	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-43593	NM_029508	76073	Mm.259180	NM_029508	ENSMUSG00000024805	Pcgf5	0610009F02Rik|1110054A01Rik|5830406C17Rik|5830443C21Rik|9530023M17Rik|AI324127	polycomb group ring finger 5	protein-coding
unique_peak1-6797-8-3-1.00522241794757-1.39487600375387	chr8	70043062	70043610	+	0	NA	Intergenic	Intergenic	-4417	NM_008674	17962	Mm.57193	NM_008674	ENSMUSG00000056426	Nat3	-	N-acetyltransferase 3	protein-coding
common_peak1-14116-104-135-0.217282359961819-0.693484447080905	chr2	128427522	128430670	+	0	NA	Intergenic	Intergenic	84035	NM_008569	17222	Mm.277408	NM_008569	ENSMUSG00000014355	Anapc1	2610021O03Rik|AI047775|AI853536|AW547281|Apc1|Mcpr|tsg24	anaphase promoting complex subunit 1	protein-coding
common_peak1-8539-25-45--0.661712050711907-1.05820747366651	chr10	91181082	91182066	+	0	NA	Intergenic	Lx9|LINE|L1	353356	NR_029812	723955		NR_029812	miRBase:MI0000715	Mir135a-2	Mirn135a-2	microRNA 135a-2	ncRNA
common_peak1-18269-10-10--0.103016273628528-0.301029995663987	chr8	34952422	34952943	+	0	NA	intron (NM_001042674, intron 4 of 7)	intron (NM_001042674, intron 4 of 7)	87653	NM_019733	19663	Mm.323997	NM_019733	ENSMUSG00000031586	Rbpms	2010300K22Rik|2700019M19Rik|AU017537|RBP-MS|hermes	RNA binding protein gene with multiple splicing	protein-coding
common_peak1-17162-91-90-0.565637305403642-2.26859704136827	chr6	119478749	119480088	+	0	NA	intron (NM_009525, intron 1 of 4)	intron (NM_009525, intron 1 of 4)	14947	NM_009525	22419	Mm.321818	NM_009525	ENSMUSG00000030170	Wnt5b	AW545702|Wnt-5b	wingless-type MMTV integration site family, member 5B	protein-coding
common_peak2-28883-101-126-0.265329549964254-0.86930367248664	chr5	86804173	86805230	+	0	NA	Intergenic	Intergenic	-2289	NM_145561	231382	Mm.240139	NM_145561		Tmprss11d	AST|AsP|BC020151	transmembrane protease, serine 11d	protein-coding
common_peak2-30205-22-27--0.160070816970199-0.317737750275047	chr7	66600677	66601635	+	0	NA	Intergenic	Intergenic	-21637	NR_015479	330544	Mm.9002	NR_015479		C230091D08Rik	-	RIKEN cDNA C230091D08 gene	ncRNA
unique_peak2-33685-7-11--0.785871670422967-1.21681515183528	chr11	103170860	103171322	+	0	NA	Intergenic	L1M4|LINE|L1	34925	NM_133715	544817	Mm.259113	NM_133715	ENSMUSG00000034255	Arhgap27	2310069I04Rik|5730442P18Rik|Gm21552|Sh3d20	Rho GTPase activating protein 27	protein-coding
unique_peak1-6141-13-5-1.19350952991661-1.95509489018123	chr6	135028087	135028530	+	0	NA	intron (NM_181444, intron 1 of 3)	intron (NM_181444, intron 1 of 3)	12628	NM_181444	232431	Mm.23575	NM_181444	ENSMUSG00000046733	Gprc5a	Rai3|Raig1	G protein-coupled receptor, family C, group 5, member A	protein-coding
common_peak2-29439-65-82-0.117126508130203-0.381858126774364	chr6	15720364	15721823	+	0	NA	intron (NM_175088, intron 4 of 4)	intron (NM_175088, intron 4 of 4)	50432	NM_175088	16543	Mm.1314	NM_175088	ENSMUSG00000041390	Mdfic	Kdt1|Mdfid	MyoD family inhibitor domain containing	protein-coding
common_peak1-11168-11-10-0.0492619656143161-0.31137425193576	chr15	76212706	76213274	+	0	NA	intron (NM_175457, intron 1 of 43)	intron (NM_175457, intron 1 of 43)	2047	NM_175457	223658	Mm.123240	NM_175457	ENSMUSG00000022558	Mroh1	D330001F17Rik|Heatr7a	maestro heat-like repeat family member 1	protein-coding
unique_peak2-32451-7-19--1.52283726458917-1.55050753388976	chr1	9545477	9546572	+	0	NA	intron (NM_175236, intron 7 of 13)	B3A|SINE|B2	7897	NR_027664	76187	Mm.28514	NM_175236	ENSMUSG00000025911	Adhfe1	6330565B14Rik|AI043035|Adh8	alcohol dehydrogenase, iron containing, 1	protein-coding
unique_peak2-34482-2-7--1.91745425626332-1.45399745587252	chr14	40936876	40937465	+	0	NA	Intergenic	L1Md_F2|LINE|L1	468219	NR_045936	73591	Mm.65499	NR_045936		1700109I08Rik	-	RIKEN cDNA 1700109I08 gene	ncRNA
common_peak2-30957-7-13--1.00826409175941-0.697979855752659	chr8	84065986	84066488	+	0	NA	intron (NM_001297596, intron 2 of 24)	intron (NM_001297596, intron 2 of 24)	199776	NM_001297593	234515	Mm.324468	NM_001024617	ENSMUSG00000037940	Inpp4b	E130107I17Rik	inositol polyphosphate-4-phosphatase, type II	protein-coding
common_peak2-26126-7-10--0.660340788339108-1.12966497611638	chr2	6379480	6379992	+	0	NA	Intergenic	B4A|SINE|B4	105954	NM_181399	98910	Mm.40673	NM_181399	ENSMUSG00000039046	Usp6nl	AI316785|RNTRE|TRE2NL|mKIAA0019	USP6 N-terminal like	protein-coding
unique_peak1-1111-10-3-1.35641534500877-1.75805390616669	chr11	94162198	94162650	+	0	NA	intron (NM_026313, intron 5 of 10)	intron (NM_026313, intron 5 of 10)	20801	NM_026313	67684	Mm.30927	NM_026313	ENSMUSG00000020863	Luc7l3	3300001P08Rik|Luc7a	LUC7-like 3 (S. cerevisiae)	protein-coding
common_peak2-26228-20-19-0.16614668970383-0.348739088570342	chr2	27515120	27515935	+	0	NA	Intergenic	B3A|SINE|B2	-17194	NM_011305	20181	Mm.24624	NM_011305	ENSMUSG00000015846	Rxra	9530071D11Rik|Nr2b1|RXRalpha1	retinoid X receptor alpha	protein-coding
common_peak1-7921-77-128--0.226700675867257-0.596924666573505	chr1	138963250	138964525	+	0	NA	Intergenic	MERVL-int|LTR|ERVL	-106862	NM_030676	26424	Mm.16794	NM_030676	ENSMUSG00000026398	Nr5a2	AU020803|D1Ertd308e|Ftf|LRH-1|UF2-H3B	nuclear receptor subfamily 5, group A, member 2	protein-coding
unique_peak1-3195-11-2-1.92373108353046-2.32232533660526	chr18	53854798	53855325	+	0	NA	intron (NR_040349, intron 2 of 2)	intron (NR_040349, intron 2 of 2)	47256	NR_040349	100502945	Mm.376937	NR_040349		Gm19466	-	predicted gene, 19466	ncRNA
unique_peak1-4973-11-6-0.701338662194009-1.32595962126035	chr4	107467833	107468505	+	0	NA	Intergenic	Intergenic	-6695	NR_033496	16975	Mm.442134	NM_053073		Lrp8	4932703M08Rik|AA921429|AI848122|ApoER2|Lr8b	low density lipoprotein receptor-related protein 8, apolipoprotein e receptor	protein-coding
common_peak2-28333-9-18--1.05831410703937-0.965105923112245	chr4	134551597	134552243	+	0	NA	Intergenic	B4|SINE|B4	65025	NM_026780	68592	Mm.29989	NM_026780	ENSMUSG00000028821	Syf2	1110018L13Rik|Cbpin|D4Bwg1551e|Gcipip|Ntc31|mp29|p29	SYF2 homolog, RNA splicing factor (S. cerevisiae)	protein-coding
unique_peak2-34472-8-11--0.579740082773585-1.14218153353838	chr14	31829859	31830500	+	0	NA	promoter-TSS (NR_028523)	promoter-TSS (NR_028523)	-721	NR_028523	100217423		NR_028523		Snord19	MBII-108	small nucleolar RNA, C/D box 19	snoRNA
common_peak2-20976-42-20-1.35001190508842-3.82396535842625	chr11	20858557	20859433	+	0	NA	Intergenic	Intergenic	-127884	NM_173752	216551	Mm.76694	NM_173752	ENSMUSG00000042363	Lgalsl	1110067D22Rik|A530071M23|Grpa|Hspc159|Lgalsla	lectin, galactoside binding-like	protein-coding
unique_peak1-7365-10-3-1.35641534500877-1.75805390616669	chrX	42050862	42051483	+	0	NA	Intergenic	L1Md_F2|LINE|L1	92166	NM_001190718	245404	Mm.55685	NM_178739	ENSMUSG00000045284	Dcaf12l1	9330180J20|A230038L21Rik|Decaf12l1|Wdr40b	DDB1 and CUL4 associated factor 12-like 1	protein-coding
common_peak1-17323-13-12-0.0780323124966764-0.334470287753051	chr6	145862842	145863402	+	0	NA	Intergenic	Intergenic	-19545	NM_010656	16651	Mm.49689	NM_010656	ENSMUSG00000030255	Sspn	Krag	sarcospan	protein-coding
common_peak2-30917-40-40-0.301423678133014-0.590471533980013	chr7	144750497	144751957	+	0	NA	Intergenic	Intergenic	121870	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
common_peak2-29306-35-41-0.0390528356837434-0.311371317671728	chr5	145190931	145191945	+	0	NA	Intergenic	MTD|LTR|MaLR	72044	NR_102373	100579137		NR_102372		Dmr	-	Dmrt1 related	ncRNA
unique_peak2-36278-8-8--0.164702583494742-1.00793137938329	chr2	61138443	61138895	+	0	NA	Intergenic	RMER19A|LTR|ERVK	-277974	NM_011529	21353	Mm.244393	NM_011529	ENSMUSG00000064289	Tank	C86182|E430026L09Rik|I-TRAF	TRAF family member-associated Nf-kappa B activator	protein-coding
common_peak2-29000-62-85--0.0155132959000133-0.301029995663939	chr5	108628825	108630324	+	0	NA	intron (NM_028481, intron 21 of 28)	L1MB5|LINE|L1	67641	NM_028481	73254	Mm.441231	NM_028481	ENSMUSG00000056531	Ccdc18	1700021E15Rik|4932411G06Rik|NY-SAR-41	coiled-coil domain containing 18	protein-coding
common_peak2-26473-52-117--0.774383059096142-3.02153464980357	chr2	77279648	77281108	+	0	NA	intron (NM_178723, intron 6 of 9)	MLT1A0|LTR|MaLR	-20323	NR_040368	100503106	Mm.443215	NR_040368	ENSMUSG00000085845	Gm13944	OTTMUSG00000015155	predicted gene 13944	ncRNA
common_peak1-10385-12-10-0.189344366450341-0.386243247519795	chr13	95327308	95327972	+	0	NA	intron (NM_009680, intron 26 of 26)	MT2_Mm|LTR|ERVL	198725	NM_009680	11774	Mm.21185	NM_009680	ENSMUSG00000021686	Ap3b1	AP-3|AU015684|C78395|Hps2|beta3A|pe|pearl|rim2	adaptor-related protein complex 3, beta 1 subunit	protein-coding
unique_peak1-2275-30-6-2.36232048743427-5.46361714676356	chr15	78532481	78533743	+	0	NA	intron (NM_183141, intron 1 of 1)	intron (NM_183141, intron 1 of 1)	15431	NM_183141	207393	Mm.323188	NM_183141	ENSMUSG00000043460	Elfn2	6330514E13|AW048948|BC094219|Lrrc62|Ppp1r29	leucine rich repeat and fibronectin type III, extracellular 2	protein-coding
common_peak1-13726-17-36--0.991157027423912-1.46094028072561	chr2	31688276	31689168	+	0	NA	intron (NM_178887, intron 4 of 6)	intron (NM_178887, intron 4 of 6)	12803	NM_178887	98970	Mm.32080	NM_178887	ENSMUSG00000026841	Fibcd1	AI448887	fibrinogen C domain containing 1	protein-coding
unique_peak2-33487-5-13--1.51173525806346-1.78669045979184	chr11	70212435	70213113	+	0	NA	intron (NM_029231, intron 5 of 16)	intron (NM_029231, intron 5 of 16)	10759	NM_029231	75273	Mm.340601	NM_029231	ENSMUSG00000018921	Pelp1	4930563C04Rik|MNAR	proline, glutamic acid and leucine rich protein 1	protein-coding
common_peak1-10331-17-13-0.410941416147434-0.546772548767014	chr13	74316740	74317526	+	0	NA	intron (NM_177333, intron 10 of 12)	Lx2|LINE|L1	29015	NM_177333	211446	Mm.261859	NM_177333	ENSMUSG00000034152	Exoc3	2810050O03Rik|E430013E20Rik|Sec6|Sec6l1	exocyst complex component 3	protein-coding
unique_peak2-34737-6-13--1.2419568116773-1.58711810488664	chr15	40957729	40958317	+	0	NA	Intergenic	Intergenic	-321005	NM_001130166	170719	Mm.254267	NM_130885	ENSMUSG00000022307	Oxr1	2210416C20Rik|C7|C7B	oxidation resistance 1	protein-coding
common_peak1-16854-41-28-0.843167709721088-1.8888294360187	chr6	54203771	54205566	+	0	NA	intron (NM_001163640, intron 6 of 12)	intron (NM_001163640, intron 6 of 12)	-18148	NM_023543	69993	Mm.321147	NM_023543	ENSMUSG00000004633	Chn2	1700026N20Rik|4930557O16Rik|ARHGAP3|Bch	chimerin 2	protein-coding
common_peak1-11724-8-11--0.579740082773585-1.14218153353838	chr16	32859450	32860037	+	0	NA	intron (NM_001200038, intron 1 of 19)	intron (NM_001200038, intron 1 of 19)	8709	NM_001200038	100502698	Mm.327319	NM_172615	ENSMUSG00000035629	1700021K19Rik	5330403K09|Kiaa0226|Rubicon|mKIAA0226	RIKEN cDNA 1700021K19 gene	protein-coding
unique_peak1-6862-14-8-0.729291158915332-0.771068449301682	chr8	87069879	87070621	+	0	NA	intron (NM_007578, intron 11 of 46)	intron (NM_007578, intron 11 of 46)	116501	NM_010499	15936	Mm.399	NM_010499	ENSMUSG00000053560	Ier2	AI317238|Ch1|Pip92	immediate early response 2	protein-coding
unique_peak1-4109-9-1-2.18961340640422-2.31132995230379	chr2	78655687	78656205	+	0	NA	Intergenic	Intergenic	-53258	NM_009454	22193	Mm.1485	NM_009454		Ube2e3	Ubce4|ubcM2	ubiquitin-conjugating enzyme E2E 3	protein-coding
unique_peak2-34060-2-4--1.23938235115068-0.931118710592187	chr13	30523177	30523566	+	0	NA	Intergenic	Intergenic	95146	NM_177322	11607	Mm.35062	NM_177322	ENSMUSG00000049115	Agtr1a	1810074K20Rik|AG2S|AI551199|AT1|AT1a|AT2R1|AT2R1A|Agtr-1a|Agtr1|Angtr-1a	angiotensin II receptor, type 1a	protein-coding
common_peak2-31141-22-28--0.210696890040167-0.337923771396236	chr8	36094563	36095466	+	0	NA	Intergenic	IAP-d-int|LTR|ERVK	-66270	NM_175091	21951	Mm.88364	NM_175091	ENSMUSG00000031529	Tnks	4930554K12Rik|AI662855|ARTD5|C86528|D130072O21Rik|TANK1|mTNKS1	tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase	protein-coding
common_peak2-21512-14-11-0.314253659636488-0.435191258261915	chr11	94226089	94226695	+	0	NA	exon (NM_029600, exon 12 of 31)	exon (NM_029600, exon 12 of 31)	27898	NM_029600	76408	Mm.23942	NM_029600	ENSMUSG00000020865	Abcc3	1700019L09Rik|ABC31|MLP2|MOAT-D|MRP3	ATP-binding cassette, sub-family C (CFTR/MRP), member 3	protein-coding
common_peak1-10612-19-22--0.120874629395327-0.306080386793804	chr14	32201958	32202805	+	0	NA	intron (NM_011894, intron 3 of 8)	MER33|DNA|MER1_type	46838	NM_011894	24056	Mm.383198	NM_011894	ENSMUSG00000021892	Sh3bp5	AI606498|SH3BP-5|Sab	SH3-domain binding protein 5 (BTK-associated)	protein-coding
unique_peak2-33038-9-9--0.132314688483142-1.03275496310833	chr10	70287867	70288252	+	0	NA	Intergenic	Intergenic	-169348	NR_045292	319646	Mm.483039	NR_045291	ENSMUSG00000037747	D630013N20Rik	-	RIKEN cDNA D630013N20 gene	ncRNA
unique_peak1-3242-8-0-3.00522241794757-2.70926996097583	chr18	64333059	64333543	+	0	NA	intron (NR_045366, intron 2 of 5)	MLT1C|LTR|MaLR	-80712	NM_009182	20451	Mm.252110	NM_009182	ENSMUSG00000056812	St8sia3	AI847333|ST8SiaIII|Siat8c	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	protein-coding
common_peak1-19028-23-37--0.526160008934505-0.720235944639228	chr9	64020168	64021218	+	0	NA	promoter-TSS (NM_026507)	promoter-TSS (NM_026507)	45	NM_026507	68014	Mm.335237	NM_026507	ENSMUSG00000032400	Zwilch	2310031L18Rik	zwilch kinetochore protein	protein-coding
common_peak2-26644-15-22--0.511397205501357-0.50761186003982	chr2	119675091	119675679	+	0	NA	Intergenic	Intergenic	-47579	NM_001164274	29808	Mm.87532	NM_013720	ENSMUSG00000033943	Mga	AV312082|C130042M01Rik|C80739|D030062C11Rik|Mad5	MAX gene associated	protein-coding
common_peak2-20511-44-59--0.0849977610399835-0.308518202581802	chr10	59907094	59908591	+	0	NA	intron (NR_045556, intron 14 of 68)	intron (NR_045556, intron 14 of 68)	45368	NM_001164374	100302688	Mm.444135	NM_001164374	ENSMUSG00000090439	Gm17455	-	predicted gene, 17455	protein-coding
common_peak2-20081-4-15--2.02346051385325-2.4322161449009	chr1	155075623	155076091	+	0	NA	intron (NM_010683, intron 24 of 27)	intron (NM_010683, intron 24 of 27)	-42280	NM_008485	16782	Mm.329272	NM_008485	ENSMUSG00000026479	Lamc2	AA589349	laminin, gamma 2	protein-coding
common_peak1-15692-17-15-0.218296338205038-0.403453972741633	chr4	139232780	139233777	+	0	NA	Intergenic	Intergenic	23825	NM_031873	83770	Mm.190612	NM_031873	ENSMUSG00000028738	Tas1r2	Gpr71|T1r2|TR2	taste receptor, type 1, member 2	protein-coding
common_peak1-17234-11-6-0.701338662194009-1.32595962126035	chr6	128200152	128200664	+	0	NA	intron (NM_011567, intron 4 of 11)	intron (NM_011567, intron 4 of 11)	50423	NM_001080979	21679	Mm.14774	NM_011567	ENSMUSG00000030353	Tead4	ETFR-2|Etfr2|FR-19|Rtef1|TEAD-4|TEF-3|Tcf13r1|Tef3|Tefr|Tefr1|Tefr1a	TEA domain family member 4	protein-coding
unique_peak2-34400-4-6--0.830815435910851-0.989110657569874	chr14	7809446	7809727	+	0	NA	Intergenic	L1_Mur1|LINE|L1	50377	NM_001164727	100038847	Mm.443041	NM_001164727	ENSMUSG00000093985	Gm10406	ENSMUSG00000072735	predicted gene 10406	protein-coding
common_peak2-31471-23-28--0.136213490618491-0.317118655902079	chr8	106010743	106011609	+	0	NA	Intergenic	Intergenic	-116523	NR_045730	71058	Mm.67707	NR_045730		4933400L20Rik	-	RIKEN cDNA 4933400L20 gene	ncRNA
common_peak1-19389-68-140--0.569590573100498-2.18379884023537	chrX	42149182	42150589	+	0	NA	Intergenic	Intergenic	-6511	NM_178739	245404	Mm.55685	NM_178739	ENSMUSG00000045284	Dcaf12l1	9330180J20|A230038L21Rik|Decaf12l1|Wdr40b	DDB1 and CUL4 associated factor 12-like 1	protein-coding
unique_peak1-3454-13-4-1.45654393575041-2.23384849113406	chr19	8987757	8988409	+	0	NA	intron (NM_008060, intron 18 of 24)	B1_Mus1|SINE|Alu	-6800	NM_024256	72727	Mm.259	NM_024256	ENSMUSG00000071649	B3gat3	2810405M13Rik	beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)	protein-coding
common_peak2-32137-26-43--0.531532526478835-0.806432121853421	chr9	106821733	106822673	+	0	NA	intron (NM_153413, intron 40 of 52)	L1Md_T|LINE|L1	-27934	NM_029103	74840	Mm.29778	NM_029103	ENSMUSG00000032575	Manf	3230402M22Rik|AA407711|AA408789|AA673178|Armet|D17914|D18Mgi17	mesencephalic astrocyte-derived neurotrophic factor	protein-coding
unique_peak1-411-9-3-1.18961340640422-1.57096726280955	chr1	157081868	157082391	+	0	NA	Intergenic	Intergenic	76296	NM_021433	58244	Mm.66264	NM_021433	ENSMUSG00000026470	Stx6	2310039E05Rik|2410005I16Rik|AA437559|AI415714|AI845861	syntaxin 6	protein-coding
unique_peak1-561-10-3-1.35641534500877-1.75805390616669	chr1	194625700	194626217	+	0	NA	Intergenic	Intergenic	-28545	NM_144881	226861	Mm.145857	NM_144881	ENSMUSG00000037375	Hhat	2810432O22Rik|AI462858|AP-2CRE|Skn|Tg(TFAP2A-cre)1Will	hedgehog acyltransferase	protein-coding
common_peak1-10824-46-37-0.650068429805216-1.49662016474183	chr14	101787942	101789857	+	0	NA	Intergenic	MYSERV6-int|LTR|ERVK	-189613	NM_029680	76627	Mm.31415	NM_029680	ENSMUSG00000042888	Prr30	1700110M21Rik	proline rich 30	protein-coding
common_peak2-20292-12-11-0.0638134843664826-0.337263207250336	chr1	193389440	193390105	+	0	NA	intron (NM_029766, intron 5 of 14)	intron (NM_029766, intron 5 of 14)	9641	NM_029766	76843	Mm.189102	NM_029766	ENSMUSG00000037474	Dtl	2810047L02Rik|5730564G15Rik|Ramp	denticleless homolog (Drosophila)	protein-coding
common_peak1-9616-37-40-0.168441066867735-0.392002726290462	chr11	120824536	120825529	+	0	NA	3' UTR (NM_139059, exon 9 of 9)	3' UTR (NM_139059, exon 9 of 9)	14651	NM_001038654	80879	Mm.28632	NM_030696	ENSMUSG00000025161	Slc16a3	Mct3|Mct4	solute carrier family 16 (monocarboxylic acid transporters), member 3	protein-coding
unique_peak1-3019-8-0-3.00522241794757-2.70926996097583	chr17	88497098	88497612	+	0	NA	Intergenic	Intergenic	-27497	NM_001190356	225058	Mm.312053	NM_001190356		Gm4832	EG225058	predicted gene 4832	protein-coding
common_peak1-9432-8-8--0.164702583494742-1.00793137938329	chr11	101784789	101785393	+	0	NA	Intergenic	Intergenic	-28644	NR_045806	73887	Mm.159084	NR_045806	ENSMUSG00000071818	4930417O22Rik	-	RIKEN cDNA 4930417O22 gene	ncRNA
common_peak1-18427-18-11-0.727956650507195-0.876666802405043	chr8	78655691	78656374	+	0	NA	Intergenic	Intergenic	683439	NM_001164235	71831	Mm.443238	NM_027944	ENSMUSG00000031620	1700007B14Rik	-	RIKEN cDNA 1700007B14 gene	protein-coding
unique_peak2-36876-2-8--2.08737925770563-1.65811743852845	chr3	94656547	94656960	+	0	NA	intron (NM_172683, intron 1 of 18)	(GA)n|Simple_repeat|Simple_repeat	15264	NM_172683	229584	Mm.274787	NM_172683	ENSMUSG00000038902	Pogz	9530006B08Rik	pogo transposable element with ZNF domain	protein-coding
common_peak1-12273-29-19-0.790361985727748-1.34608670144205	chr17	43326733	43327613	+	0	NA	Intergenic	Intergenic	-31933	NR_045153	545207	Mm.329050	NR_045153		E130008D07Rik	-	RIKEN cDNA E130008D07 gene	ncRNA
unique_peak2-36431-1-6--2.43441193227435-1.56314192529759	chr2	130359336	130359744	+	0	NA	intron (NM_008980, intron 9 of 21)	intron (NM_008980, intron 9 of 21)	29945	NR_040348	321014	Mm.442588	NR_040348	ENSMUSG00000060029	4930473A02Rik	-	RIKEN cDNA 4930473A02 gene	ncRNA
common_peak2-28887-42-33-0.654866486616845-1.41268768702114	chr5	88675095	88676160	+	0	NA	Intergenic	L1Md_A|LINE|L1	-22317	NM_001110779	665615	Mm.366701	NM_001110779	ENSMUSG00000090302	Gm7714	EG665615	predicted gene 7714	protein-coding
unique_peak2-34989-6-11--1.01956439034085-1.32595962126035	chr15	99497358	99497935	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-3503	NM_009597	11419	Mm.440107	NM_009597	ENSMUSG00000023017	Asic1	AI843610|ASIC|ASIC1a|Accn2|B530003N02Rik|BNaC2	acid-sensing (proton-gated) ion channel 1	protein-coding
common_peak2-24928-11-23--1.07626891646954-1.24082643394777	chr17	87613338	87614125	+	0	NA	Intergenic	Intergenic	-19449	NR_046016	399626	Mm.396062	NR_046016		C330024C12Rik	-	RIKEN cDNA C330024C12 gene	ncRNA
unique_peak1-2669-11-1-2.50869358425161-2.83420869758413	chr16	55556737	55557225	+	0	NA	Intergenic	Lx6|LINE|L1	265270	NM_001159394	80859	Mm.247272	NM_030612	ENSMUSG00000035356	Nfkbiz	AA408868|INAP|Mail	nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta	protein-coding
common_peak2-30496-8-4-0.683294323060208-1.21878474469819	chr7	63912057	63912464	+	0	NA	Intergenic	RMER15-int|LTR|ERVL	417119	NM_021879	18431	Mm.137052	NM_021879	ENSMUSG00000030450	Oca2	D7H15S12|D7Icr28RN|D7Nic1|p	oculocutaneous albinism II	protein-coding
unique_peak1-1753-11-4-1.18676548936425-1.68134727924692	chr13	108157989	108158593	+	0	NA	Intergenic	MLT1J2|LTR|MaLR	-101611	NR_045083	105120	Mm.417700	NR_045083		AI197445	-	expressed sequence AI197445	ncRNA
common_peak1-8093-21-22-0.0459273092092225-0.319918318021793	chr1	180851061	180851780	+	0	NA	intron (NM_001161665, intron 12 of 14)	GA-rich|Low_complexity|Low_complexity	392164	NM_001161665	269152	Mm.129727	NM_177724	ENSMUSG00000026494	Kif26b	4832420M10|BC056349|D230039L06Rik	kinesin family member 26B	protein-coding
unique_peak1-2597-7-0-2.79909083029819-2.40823996531185	chr16	32127386	32127792	+	0	NA	Intergenic	B3|SINE|B2	27701	NM_025892	66994	Mm.22990	NM_025892	ENSMUSG00000035790	Cep19	1500031L02Rik|AI428934|AL022620	centrosomal protein 19	protein-coding
common_peak2-31935-12-12--0.0516637330534535-0.309718203022949	chr9	63757292	63757865	+	0	NA	Intergenic	Intergenic	112288	NM_008542	17130	Mm.325757	NM_008542	ENSMUSG00000036867	Smad6	Madh6|b2b390Clo	SMAD family member 6	protein-coding
common_peak2-19707-24-22-0.269647946710704-0.457753417732779	chr1	64338039	64338902	+	0	NA	Intergenic	Intergenic	-170507	NM_033563	93691	Mm.29466	NM_033563	ENSMUSG00000025959	Klf7	9830124P08Rik	Kruppel-like factor 7 (ubiquitous)	protein-coding
common_peak1-14473-176-383--0.366335891619768-2.61085095493513	chr3	119782063	119783800	+	0	NA	Intergenic	Lx5|LINE|L1	-296625	NM_019550	56195	Mm.29966	NM_019550	ENSMUSG00000028134	Ptbp2	Ptb2|brPTB|nPTB	polypyrimidine tract binding protein 2	protein-coding
common_peak1-9821-56-83--0.156721597339518-0.389025993365906	chr12	70974449	70975465	+	0	NA	intron (NM_201519, intron 2 of 30)	(CA)n|Simple_repeat|Simple_repeat	-19135	NM_178628	73991	Mm.474462	NM_178628	ENSMUSG00000021066	Atl1	4930435M24Rik|Adfsp|Fsp1|Spg3|Spg3a	atlastin GTPase 1	protein-coding
common_peak1-14684-24-37--0.454717610675869-0.572500200098104	chr3	65391698	65392601	+	0	NA	Intergenic	Intergenic	-58813	NR_027955	71004	Mm.475465	NM_001033527	ENSMUSG00000074580	4931440P22Rik	-	RIKEN cDNA 4931440P22 gene	ncRNA
common_peak1-10954-15-10-0.552733131918359-0.604422558181019	chr15	25768387	25769138	+	0	NA	Intergenic	MER91A|DNA|Tip100	-4291	NM_001034851	66270	Mm.25311	NM_025459	ENSMUSG00000022270	Fam134b	1810015C04Rik|AU015349	family with sequence similarity 134, member B	protein-coding
common_peak2-20005-20-11-0.903112283870037-1.11267835143409	chr1	134771498	134772146	+	0	NA	Intergenic	ID_B1|SINE|B4	-5110	NM_010732	16980	Mm.39640	NM_010732	ENSMUSG00000026443	Lrrn2	5730406J09Rik|NLRR-2	leucine rich repeat protein 2, neuronal	protein-coding
common_peak2-27233-9-6-0.382258484346616-1.11707584880836	chr3	51998048	51998482	+	0	NA	Intergenic	MLT1F|LTR|MaLR	-73994	NM_019739	56458	Mm.29891	NM_019739	ENSMUSG00000044167	Foxo1	AI876417|Afxh|FKHR|Fkhr1|Foxo1a	forkhead box O1	protein-coding
unique_peak2-35667-4-9--1.34538860874061-1.36011389749466	chr18	9270619	9271014	+	0	NA	Intergenic	Intergenic	11991	NM_153086	225152	Mm.119273	NM_153086	ENSMUSG00000036855	Gjd4	9430022F06Rik|Cx39	gap junction protein, delta 4	protein-coding
unique_peak1-1089-10-1-2.35641534500877-2.57096726280955	chr11	88268187	88268690	+	0	NA	intron (NM_054043, intron 7 of 13)	intron (NM_054043, intron 7 of 13)	102163	NR_039545	100628571		NR_039545	miRBase:MI0016973	Mir378b	mmu-mir-378b	microRNA 378b	ncRNA
common_peak2-27194-8-5-0.420259917226415-1.10484139239135	chr3	37729330	37729747	+	0	NA	Intergenic	Intergenic	-68197	NR_040559	626410	Mm.389417	NR_040559		Gm20755	-	predicted gene, 20755	ncRNA
unique_peak2-32834-7-10--0.660340788339108-1.12966497611638	chr1	191575629	191576172	+	0	NA	intron (NM_008976, intron 1 of 18)	B2_Mm2|SINE|B2	23753	NM_008976	19250	Mm.4498	NM_008976	ENSMUSG00000026604	Ptpn14	C130080N23Rik|OTTMUSG00000022087|PTP36	protein tyrosine phosphatase, non-receptor type 14	protein-coding
unique_peak1-1660-8-3-1.00522241794757-1.39487600375387	chr13	63153433	63153912	+	0	NA	intron (NM_001289926, intron 3 of 15)	Lx|LINE|L1	87419	NM_001289924	72061	Mm.188105	NM_028079	ENSMUSG00000021458	2010111I01Rik	2300006M17Rik|AP-O|Aopep	RIKEN cDNA 2010111I01 gene	protein-coding
unique_peak2-33231-7-9--0.522837264589173-1.05908390183068	chr10	120489843	120490357	+	0	NA	intron (NM_011915, intron 2 of 9)	(TG)n|Simple_repeat|Simple_repeat	19040	NM_011915	24117	Mm.32831	NM_011915	ENSMUSG00000020218	Wif1	AW107799|WIF-1	Wnt inhibitory factor 1	protein-coding
common_peak2-21629-9-12--0.510826311736872-0.394412252720706	chr11	101070019	101070607	+	0	NA	intron (NM_007970, intron 8 of 20)	B2_Mm2|SINE|B2	17451	NM_007970	14055	Mm.5027	NM_007970	ENSMUSG00000006920	Ezh1	AW557915|mKIAA0388	enhancer of zeste homolog 1 (Drosophila)	protein-coding
unique_peak1-4980-8-6-0.197867495889966-1.03789460276074	chr4	109406813	109407323	+	0	NA	intron (NM_007983, intron 4 of 18)	intron (NM_007983, intron 4 of 18)	57836	NM_007983	14084	Mm.318259	NM_007983	ENSMUSG00000010517	Faf1	AA408698|Dffrx|Fam	Fas-associated factor 1	protein-coding
common_peak1-9157-21-30--0.384707045120639-0.446094173747089	chr11	77763296	77764047	+	0	NA	intron (NM_001291225, intron 1 of 15)	intron (NM_001291225, intron 1 of 15)	19330	NM_021286	20370	Mm.229330	NM_021286	ENSMUSG00000000632	Sez6	BSRP-C|D11Bhm177e|sez-6	seizure related gene 6	protein-coding
common_peak2-30246-41-75--0.546778808594925-1.21053550697016	chr7	5079465	5081146	+	0	NA	Intergenic	RLTR13D6|LTR|ERVK	-2753	NM_009028	19428	Mm.322186	NM_009028	ENSMUSG00000083649	Rasl2-9	M2|Ran|Ran/M2|Rasl2-9-ps	RAS-like, family 2, locus 9	protein-coding
unique_peak1-5663-9-0-3.18961340640422-3.01029995663981	chr6	30469026	30469540	+	0	NA	intron (NM_029373, intron 2 of 2)	B1_Mur4|SINE|Alu	6997	NM_029373	75647	Mm.46117	NM_027073	ENSMUSG00000029784	Ssmem1	1700016K02Rik|1700025E21Rik	serine-rich single-pass membrane protein 1	protein-coding
unique_peak1-2234-10-6-0.549060422951165-1.21398586181642	chr15	76264175	76264684	+	0	NA	TTS (NR_105919)	TTS (NR_105919)	785	NR_105919	102465576		NR_105919		Mir6954	mmu-mir-6954	microRNA mir-6954	ncRNA
common_peak1-11375-101-115-0.396033241608848-1.4749845896535	chr15	96459626	96461234	+	0	NA	intron (NM_001166458, intron 1 of 15)	B4A|SINE|B4	11963	NM_134086	105727	Mm.103568	NM_134086	ENSMUSG00000023169	Slc38a1	AA408026|AA409865|AL022800|AU015942|NAT2	solute carrier family 38, member 1	protein-coding
common_peak2-31356-25-17-0.691924903902794-0.98872314135509	chr8	84689269	84689863	+	0	NA	Intergenic	Intergenic	236919	NM_001254747	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak2-25896-12-10-0.189344366450341-0.386243247519795	chr19	45079981	45080423	+	0	NA	promoter-TSS (NM_153796)	promoter-TSS (NM_153796)	730	NM_053164	94067	Mm.44174	NM_053164	ENSMUSG00000025208	Mrpl43	4930442D21Rik|bMRP36a	mitochondrial ribosomal protein L43	protein-coding
common_peak1-17656-14-12-0.198776442216552-0.373562084705529	chr7	61339698	61340432	+	0	NA	Intergenic	LTRIS_Mm|LTR|ERV1	-192806	NR_105746	102466619		NR_105746	miRBase:MI0021585	Mir6238	mmu-mir-6238	microRNA mir-6238	ncRNA
unique_peak1-908-12-4-1.32684789020028-2.04196296489515	chr11	43185401	43186094	+	0	NA	Intergenic	Lx7|LINE|L1	2216	NR_029558	387164		NR_029558	miRBase:MI0000170	Mir146	Mirn146|miR-146a|mmu-mir-146	microRNA 146	ncRNA
unique_peak1-3396-9-2-1.60465090568306-1.87199725847353	chr19	4297668	4298190	+	0	NA	intron (NM_001290818, intron 1 of 20)	B1F|SINE|Alu	8293	NM_130863	110355	Mm.254144	NM_130863	ENSMUSG00000024858	Adrbk1	Adrbk-1|Bark-1|GRK2|beta ARK|betaARK1	adrenergic receptor kinase, beta 1	protein-coding
common_peak1-13423-38-28-0.713471664170958-1.45748092439675	chr19	53556511	53558266	+	0	NA	Intergenic	Intergenic	-18102	NR_028427	381232	Mm.248624	NR_028427	ENSMUSG00000097636	5830416P10Rik	4833407H14Rik|5430437C04Rik|ENSMUSG00000074788|Gm10758	RIKEN cDNA 5830416P10 gene	ncRNA
unique_peak2-39710-2-6--1.72480917832092-1.26211192963361	chr9	116334966	116335360	+	0	NA	Intergenic	MTD|LTR|MaLR	-250682	NM_009371	21813	Mm.172346	NM_009371	ENSMUSG00000032440	Tgfbr2	1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII	transforming growth factor, beta receptor II	protein-coding
unique_peak1-234-10-0-3.35641534500877-3.31132995230379	chr1	89489670	89490230	+	0	NA	intron (NM_001160165, intron 1 of 2)	MTA_Mm|LTR|MaLR	-1175	NM_015750	23956	Mm.143717	NM_015750	ENSMUSG00000079434	Neu2	MBS|MSS|MTS	neuraminidase 2	protein-coding
common_peak1-9139-49-57-0.148302827897612-0.389014771016012	chr11	75652537	75654313	+	0	NA	intron (NM_029548, intron 5 of 7)	intron (NM_029548, intron 5 of 7)	-43866	NM_007873	13447	Mm.5137	NM_007873	ENSMUSG00000020848	Doc2b	-	double C2, beta	protein-coding
common_peak1-19049-23-30--0.232428805877794-0.363124929330844	chr9	65827063	65828081	+	0	NA	intron (NM_173185, intron 4 of 13)	intron (NM_173185, intron 4 of 13)	70755	NM_173185	214897	Mm.325816	NM_173185	ENSMUSG00000032384	Csnk1g1	9130020E21Rik	casein kinase 1, gamma 1	protein-coding
common_peak1-13637-16-24--0.525592547506663-0.561823156887258	chr2	25546353	25547102	+	0	NA	Intergenic	ETnERV2-int|LTR|ERVK	8481	NM_178036	332578	Mm.246797	NM_178036	ENSMUSG00000047356	Lcn10	9230112J07Rik	lipocalin 10	protein-coding
unique_peak1-2703-14-2-2.31425365963649-3.28500101358144	chr16	90823229	90824019	+	0	NA	Intergenic	Intergenic	-7480	NM_027627	70967	Mm.253077	NM_027627		Eva1c	1700092M14Rik|4931408A02Rik|Fam176c	eva-1 homolog C (C. elegans)	protein-coding
common_peak2-20850-66-93--0.0361051872517963-0.3022037702501	chr11	69368315	69369878	+	0	NA	3' UTR (NM_007911, exon 5 of 5)	3' UTR (NM_007911, exon 5 of 5)	4643	NM_007911	13643	Mm.249637	NM_007911	ENSMUSG00000003934	Efnb3	EFL-6|ELF-3|Elk-L3|Epl8|LERK-8|NLERK-2	ephrin B3	protein-coding
unique_peak2-33021-27-74--1.23727273960064-4.01573438430963	chr10	68135799	68138426	+	0	NA	Intergenic	Intergenic	-49382	NM_177794	327766	Mm.2479	NM_177794	ENSMUSG00000060044	Tmem26	3230401A06|AI195372	transmembrane protein 26	protein-coding
common_peak1-18560-10-10--0.103016273628528-0.301029995663987	chr8	104641773	104642397	+	0	NA	Intergenic	Intergenic	666926	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
common_peak1-18491-14-9-0.577288065470282-0.630231561310125	chr8	85059825	85060421	+	0	NA	Intergenic	ID_B1|SINE|B4	-133638	NM_008357	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
unique_peak2-39829-3-7--1.41398308995928-1.23214870625617	chrX	48341645	48342014	+	0	NA	Intergenic	Intergenic	29366	NM_172413	72065	Mm.43152	NM_172413	ENSMUSG00000050029	Rap2c	2010200P20Rik|AI194294|AL022976	RAP2C, member of RAS oncogene family	protein-coding
common_peak2-30721-21-42--0.856775489435862-1.3806499615138	chr7	113513783	113514725	+	0	NA	Intergenic	RLTR6-int|LTR|ERV1	-46212	NR_030720	668128	Mm.484022	NR_030720		Gm8989	EG668128|Gm21911	very large inducible GTPase 1 pseudogene	pseudo
common_peak2-27428-13-29--1.12841856497075-1.46151065785802	chr3	89337384	89338312	+	0	NA	intron (NM_080466, intron 1 of 7)	intron (NM_080466, intron 1 of 7)	13762	NM_080466	140493	Mm.120250	NM_080466		Kcnn3	KCa2.3|SK3|SKCA3	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	protein-coding
unique_peak1-6340-17-7-1.21829633820504-1.55050753388977	chr7	49342504	49343274	+	0	NA	Intergenic	Lx|LINE|L1	-28538	NM_001105056	628444	Mm.469901	NM_001105056	ENSMUSG00000092032	Vmn2r59	EG628444	vomeronasal 2, receptor 59	protein-coding
unique_peak2-38099-7-8--0.370834171144123-1.00793137938329	chr6	66967431	66967862	+	0	NA	3' UTR (NM_025278, exon 5 of 5)	3' UTR (NM_025278, exon 5 of 5)	-18947	NR_040278	320172	Mm.449039	NR_040278	ENSMUSG00000087231	E230016M11Rik	-	RIKEN cDNA E230016M11 gene	ncRNA
unique_peak1-4886-9-0-3.18961340640422-3.01029995663981	chr4	43330079	43330593	+	0	NA	intron (NM_177195, intron 9 of 28)	MERVL_2A-int|LTR|ERVL	50305	NM_177195	320571	Mm.74465	NM_177195	ENSMUSG00000028457	Atp8b5	4930417M19Rik|Feta	ATPase, class I, type 8B, member 5	protein-coding
unique_peak1-6478-13-6-0.971117108580164-1.01572999746118	chr7	112200500	112201052	+	0	NA	Intergenic	Intergenic	-3986	NM_146358	258355	Mm.377452	NM_146358	ENSMUSG00000073914	Olfr677	MOR32-11	olfactory receptor 677	protein-coding
unique_peak1-3709-12-3-1.64877598508764-2.36932189928148	chr19	44311711	44312402	+	0	NA	intron (NM_024450, intron 4 of 5)	RMER17C|LTR|ERVK	34278	NM_024450	30049	Mm.480594	NM_024450	ENSMUSG00000025202	Scd3	4930513N16Rik	stearoyl-coenzyme A desaturase 3	protein-coding
unique_peak2-35881-5-6--0.511735258063458-0.947717972411649	chr18	82909764	82910077	+	0	NA	Intergenic	L1_Mur3|LINE|L1	18511	NR_045389	76961	Mm.396392	NR_045389		2210420H20Rik	-	RIKEN cDNA 2210420H20 gene	ncRNA
unique_peak1-1619-11-0-3.50869358425161-3.61235994796777	chr13	41660895	41661433	+	0	NA	Intergenic	Intergenic	-40421	NM_001163572	621976	Mm.259830	NM_001163572	ENSMUSG00000087370	Tmem170b	EG621976	transmembrane protein 170B	protein-coding
unique_peak2-32867-0-6--3.64748585253182-1.56314192529759	chr10	5158044	5158479	+	0	NA	intron (NM_001079686, intron 2 of 54)	ORR1E|LTR|MaLR	6427	NM_001079686	64009	Mm.331626	NM_022027	ENSMUSG00000019769	Syne1	8B|A330049M09Rik|BE692247|C130039F11Rik|CPG2|Myne1|mKIAA1756	spectrin repeat containing, nuclear envelope 1	protein-coding
common_peak2-20121-44-46-0.267303982890898-0.556612435105728	chr1	163403478	163404075	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-21012	NM_183391	240873	Mm.276823	NM_183391	ENSMUSG00000066755	Tnfsf18	Gitrl	tumor necrosis factor (ligand) superfamily, member 18	protein-coding
common_peak1-18516-19-17-0.232762325219374-0.392630012299441	chr8	90868854	90870020	+	0	NA	intron (NM_012047, intron 8 of 16)	intron (NM_012047, intron 8 of 16)	16653	NM_012047	26992	Mm.5400	NM_012047		Brd7	BP75|CELTIX1|Ptpn13ip	bromodomain containing 7	protein-coding
common_peak2-19577-73-42-1.26613025172312-6.05072338421449	chr1	14309264	14310390	+	0	NA	Intergenic	Intergenic	-9547	NM_010164	14048	Mm.250185	NM_010164	ENSMUSG00000025932	Eya1	bor	eyes absent 1 homolog (Drosophila)	protein-coding
unique_peak1-4577-12-4-1.32684789020028-2.04196296489515	chr3	57295398	57295991	+	0	NA	intron (NM_133784, intron 3 of 6)	L1MC4|LINE|L1	66362	NM_145539	229302	Mm.26618	NM_145539	ENSMUSG00000027801	Tm4sf4	Iltmp	transmembrane 4 superfamily member 4	protein-coding
common_peak1-14467-82-151--0.354664369137851-1.126519948992	chr3	90585992	90587826	+	0	NA	Intergenic	L1Md_F|LINE|L1	56081	NM_207263	384997	Mm.316644	NM_207263	ENSMUSG00000042250	Pglyrp4	Gm1478|Gm413	peptidoglycan recognition protein 4	protein-coding
unique_peak1-1297-21-6-1.76213434320863-2.81226952737395	chr11	119987953	119989014	+	0	NA	intron (NM_001164801, intron 10 of 10)	intron (NM_001164801, intron 10 of 10)	24182	NM_001164799	72055	Mm.253403	NM_024249	ENSMUSG00000061306	Slc38a10	1810073N04Rik	solute carrier family 38, member 10	protein-coding
unique_peak1-2048-27-2-3.40658345017408-7.23262596636762	chr15	27428216	27429423	+	0	NA	intron (NM_020332, intron 1 of 11)	B2_Mm1a|SINE|B2	32387	NM_020332	11732	Mm.265264	NM_020332	ENSMUSG00000022265	Ank	Ankh|D15Ertd221e|ank|mKIAA1581	progressive ankylosis	protein-coding
unique_peak2-37413-9-7-0.18961340640422-1.05908390183068	chr4	147906349	147906756	+	0	NA	intron (NM_020009, intron 36 of 57)	intron (NM_020009, intron 36 of 57)	-25984	NM_016699	50912	Mm.266635	NM_016699	ENSMUSG00000017264	Exosc10	PM-Scl|PM/Scl-100|Pmscl2|RRP6|p2|p3|p4	exosome component 10	protein-coding
unique_peak1-5172-19-7-1.40268732666169-1.89173646618542	chr5	29699316	29699979	+	0	NA	intron (NM_020295, intron 1 of 16)	(TATATG)n|Simple_repeat|Simple_repeat	5283	NM_020295	56873	Mm.41572	NM_020295	ENSMUSG00000010721	Lmbr1	1110048D14Rik|AU017641	limb region 1	protein-coding
unique_peak2-33868-1-6--2.43441193227435-1.56314192529759	chr12	21363099	21363582	+	0	NA	intron (NR_102380, intron 1 of 15)	intron (NR_102380, intron 1 of 15)	16153	NR_102380	11491	Mm.27681	NM_009615	ENSMUSG00000052593	Adam17	CD156b|Tace	a disintegrin and metallopeptidase domain 17	protein-coding
common_peak2-25887-45-40-0.502806020726788-1.02303743263849	chr19	44388006	44389173	+	0	NA	Intergenic	L1MB5|LINE|L1	10928	NR_039574	100628619		NR_039574		Mir5114	mmu-mir-5114|mu-mir-5114	microRNA 5114	ncRNA
common_peak2-25100-31-40--0.13231333380496-0.326417267106726	chr18	36669609	36670348	+	0	NA	intron (NM_010415, intron 3 of 5)	intron (NM_010415, intron 3 of 5)	5481	NM_010415	15200	Mm.289681	NM_010415	ENSMUSG00000024486	Hbegf	AW047313|Dtr|Dts|Hegfl	heparin-binding EGF-like growth factor	protein-coding
common_peak1-13293-23-12-1.02132778636799-1.44787515926925	chr19	38592637	38593529	+	0	NA	Intergenic	L1Md_T|LINE|L1	-5604	NM_019588	74055	Mm.34031	NM_019588	ENSMUSG00000024998	Plce1	4933403A21Rik|PLCepsilon|Plce|mKIAA1516	phospholipase C, epsilon 1	protein-coding
unique_peak1-6418-8-0-3.00522241794757-2.70926996097583	chr7	84747796	84748248	+	0	NA	Intergenic	L1Md_F2|LINE|L1	974702	NM_008746	18213	Mm.33496	NM_008746		Ntrk3	AW125844|Ntrk3_tv3|TrkC	neurotrophic tyrosine kinase, receptor, type 3	protein-coding
common_peak2-21015-42-58--0.140313721494658-0.332057628060234	chr11	29692980	29694129	+	0	NA	intron (NM_146016, intron 22 of 41)	intron (NM_146016, intron 22 of 41)	32114	NM_176829	216622	Mm.443260	NM_176829	ENSMUSG00000078157	4931440F15Rik	Fem1ab	RIKEN cDNA 4931440F15 gene	protein-coding
common_peak2-21490-9-14--0.717277189204299-0.53895475198017	chr11	88582729	88583369	+	0	NA	intron (NR_038058, intron 2 of 3)	intron (NR_038058, intron 2 of 3)	3092	NR_038058	193280	Mm.396842	NR_038058		C030037D09Rik	9330160M04	RIKEN cDNA C030037D09 gene	ncRNA
common_peak1-16825-102-153-0.00430193614465324-0.301737316917986	chr6	49262471	49264427	+	0	NA	Intergenic	RMER16-int|LTR|ERVK	-5903	NM_175098	57895	Mm.32416	NM_175098	ENSMUSG00000050786	Ccdc126	6330407D12Rik|AA675040|AI465320|AL022711	coiled-coil domain containing 126	protein-coding
common_peak2-30558-20-24--0.155781405183531-0.319918318021793	chr7	78913847	78914642	+	0	NA	Intergenic	Lx4B|LINE|L1	537237	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding
common_peak2-20336-21-21-0.110057646628938-0.344491671143527	chr10	4432590	4433326	+	0	NA	intron (NM_001161822, intron 2 of 5)	intron (NM_001161822, intron 2 of 5)	8817	NM_019958	56533	Mm.44606	NM_019958	ENSMUSG00000019775	Rgs17	6430507P11Rik|Rgsz2	regulator of G-protein signaling 17	protein-coding
unique_peak1-6800-9-2-1.60465090568306-1.87199725847353	chr8	70529331	70529857	+	0	NA	Intergenic	Intergenic	-31121	NM_177698	234353	Mm.32525	NM_027626	ENSMUSG00000030465	Psd3	4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D	pleckstrin and Sec7 domain containing 3	protein-coding
common_peak2-32073-15-17--0.157760250886656-0.307611222530528	chr9	95801464	95802341	+	0	NA	intron (NM_019864, intron 23 of 46)	B3|SINE|B2	-43601	NM_001271569	73410	Mm.443314	NM_028533		1700065D16Rik	-	RIKEN cDNA 1700065D16 gene	protein-coding
common_peak1-14748-55-119--0.702270724455817-2.60049418611543	chr3	87906306	87908127	+	0	NA	intron (NM_001033484, intron 19 of 37)	RSINE1|SINE|B4	21243	NM_001033484	404710	Mm.331133	NM_001033484	ENSMUSG00000028068	Iqgap3	AI593484|D030034H08	IQ motif containing GTPase activating protein 3	protein-coding
common_peak1-13850-20-24--0.155781405183531-0.319918318021793	chr2	61401597	61402509	+	0	NA	Intergenic	Intergenic	-14590	NM_011529	21353	Mm.244393	NM_011529	ENSMUSG00000064289	Tank	C86182|E430026L09Rik|I-TRAF	TRAF family member-associated Nf-kappa B activator	protein-coding
common_peak1-13247-98-103-0.501328975289459-1.99140909626453	chr19	32106962	32108644	+	0	NA	intron (NM_018830, intron 10 of 23)	PB1D10|SINE|Alu	69827	NM_018830	54447	Mm.491229	NM_018830	ENSMUSG00000024887	Asah2	AI585898	N-acylsphingosine amidohydrolase 2	protein-coding
common_peak2-27262-19-13-0.595332404604082-0.713635438203849	chr3	57073469	57074175	+	0	NA	Intergenic	L1_Mus2|LINE|L1	32019	NM_008536	17112	Mm.856	NM_008536	ENSMUSG00000027800	Tm4sf1	L6|M3s1	transmembrane 4 superfamily member 1	protein-coding
common_peak1-7670-19-47--1.18227517405947-2.51566814918164	chr1	75236402	75237098	+	0	NA	intron (NM_020266, intron 4 of 8)	ID4_|SINE|ID	3473	NM_001159885	56812	Mm.489660	NM_020266		Dnajb2	2700059H22Rik|Dnajb10|Hsj1|mDj8	DnaJ (Hsp40) homolog, subfamily B, member 2	protein-coding
unique_peak1-5679-11-8-0.338768582809301-1.14218153353838	chr6	31549615	31550218	+	0	NA	Intergenic	Intergenic	-35979	NM_013723	27205	Mm.89918	NM_013723	ENSMUSG00000025608	Podxl	AW121214|Ly102|PC|PCLP-1|Pclp1	podocalyxin-like	protein-coding
unique_peak2-37870-5-8--0.874305337448166-1.10484139239135	chr5	137672256	137672708	+	0	NA	Intergenic	Intergenic	-57000	NM_009599	11423	Mm.255464	NM_009599	ENSMUSG00000023328	Ache	-	acetylcholinesterase	protein-coding
common_peak1-13677-11-14--0.398197011356905-0.379391706698377	chr2	28840205	28840735	+	0	NA	intron (NM_001166705, intron 2 of 5)	(GA)n|Simple_repeat|Simple_repeat	-68510	NM_001164186	54422	Mm.21390	NM_019446	ENSMUSG00000026805	Barhl1	Dres115|MBH2	BarH-like 1 (Drosophila)	protein-coding
unique_peak1-2619-7-4-0.477162735410827-1.09384600808989	chr16	36706836	36707297	+	0	NA	intron (NM_001285788, intron 1 of 7)	B4A|SINE|B4	13002	NM_001285791	106347	Mm.17807	NM_134109	ENSMUSG00000022900	Ildr1	AU041483|AU044638	immunoglobulin-like domain containing receptor 1	protein-coding
common_peak2-20259-4-6--0.830815435910851-0.989110657569874	chr1	186609531	186609928	+	0	NA	TTS (NM_001290273)	TTS (NM_001290273)	25450	NM_001290273	66112	Mm.272457	NM_001081361	ENSMUSG00000026621	Marc1	1300013F15Rik|Mosc1	mitochondrial amidoxime reducing component 1	protein-coding
common_peak2-31654-60-61-0.400095551233656-0.973121849231041	chr8	126539127	126540880	+	0	NA	intron (NM_133966, intron 1 of 4)	intron (NM_133966, intron 1 of 4)	5206	NM_133966	102162	Mm.291777	NM_133966	ENSMUSG00000038697	Taf5l	1110005N04Rik|AI849020	TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor	protein-coding
common_peak2-22246-28-29-0.146068524212944-0.357106932979091	chr13	65240737	65242028	+	0	NA	Intergenic	Intergenic	-12152	NM_146819	258816	Mm.377705	NM_146819	ENSMUSG00000049806	Olfr466	MOR209-1	olfactory receptor 466	protein-coding
common_peak1-13043-46-39-0.576067848361439-1.27570999829275	chr19	5770460	5771770	+	0	NA	intron (NM_023912, intron 1 of 16)	CpG	286	NM_023912	78891	Mm.276063	NM_023912	ENSMUSG00000024941	Scyl1	2810011O19Rik|C85140|Ntkl|mdf|mfd|p105	SCY1-like 1 (S. cerevisiae)	protein-coding
common_peak1-14789-23-27--0.0855874175485232-0.30512735654709	chr3	89715075	89715992	+	0	NA	intron (NM_010559, intron 1 of 9)	intron (NM_010559, intron 1 of 9)	1551	NM_010559	16194	Mm.2856	NM_010559	ENSMUSG00000027947	Il6ra	CD126|IL-6R|Il6r	interleukin 6 receptor, alpha	protein-coding
unique_peak2-38680-10-13--0.450939577048835-0.386243247519795	chr7	100606941	100607456	+	0	NA	Intergenic	MLT2C2|LTR|ERVL	378809	NM_021427	58238	Mm.113787	NM_021427		Fam181b	A830059I20Rik|AB041569	family with sequence similarity 181, member B	protein-coding
common_peak2-23284-19-11-0.81772482594053-0.991115276827166	chr15	28001389	28001868	+	0	NA	Intergenic	ORR1A3|LTR|MaLR	-46025	NM_001081302	223435	Mm.485422	NM_001081302	ENSMUSG00000022263	Trio	6720464I07Rik|AA408740|Solo	triple functional domain (PTPRF interacting)	protein-coding
common_peak2-23872-13-13--0.0288828914198356-0.309074325783021	chr15	103214939	103215673	+	0	NA	Intergenic	Intergenic	-18127	NM_010577	16402	Mm.16234	NM_010577	ENSMUSG00000000555	Itga5	Cd49e|Fnra|VLA5	integrin alpha 5 (fibronectin receptor alpha)	protein-coding
unique_peak2-39781-5-4--0.0263084308932156-0.909929411522249	chrX	8251991	8252340	+	0	NA	Intergenic	L1_Mur3|LINE|L1	15805	NM_001081565	631002	Mm.379565	NM_001081565	ENSMUSG00000079703	Ssxb8	-	synovial sarcoma, X member B, breakpoint 8	protein-coding
unique_peak1-5612-35-2-3.84640775774135-10.2940202619029	chr6	114458019	114459191	+	0	NA	Intergenic	Intergenic	104945	NM_001252643	15465	Mm.333327	NM_008285	ENSMUSG00000053004	Hrh1	Bphs|H1R|HH1R|Hir	histamine receptor H1	protein-coding
common_peak2-28197-42-43-0.282897709229887-0.572487971606918	chr4	116684865	116686005	+	0	NA	Intergenic	Charlie1a|DNA|MER1_type	-6578	NM_175135	108067	Mm.34612	NM_175135	ENSMUSG00000028683	Eif2b3	1190002P15Rik	eukaryotic translation initiation factor 2B, subunit 3	protein-coding
unique_peak2-34588-6-16--1.52206473087004-1.32521814697968	chr14	69732078	69732557	+	0	NA	Intergenic	L1Md_A|LINE|L1	-57542	NM_010920	18092	Mm.390691	NM_010920	ENSMUSG00000044186	Nkx2-6	AV044928|Nkx-2.6|Nkx2.6|Tix|tinman	NK2 homeobox 6	protein-coding
common_peak2-27914-35-35-0.261445257020192-0.479515789778899	chr4	8646952	8647687	+	0	NA	intron (NM_001277149, intron 1 of 37)	B4|SINE|B4	29766	NM_001277149	320790	Mm.138792	NM_001033395	ENSMUSG00000041235	Chd7	A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis	chromodomain helicase DNA binding protein 7	protein-coding
common_peak1-11293-10-11--0.228547155712387-0.31137425193576	chr15	83412062	83412684	+	0	NA	intron (NM_183017, intron 8 of 13)	intron (NM_183017, intron 8 of 13)	13214	NM_183017	223723	Mm.46778	NM_183017	ENSMUSG00000016757	Ttll12	BC055368|D430005B17	tubulin tyrosine ligase-like family, member 12	protein-coding
unique_peak2-32715-4-5--0.608423014574403-0.909929411522249	chr1	156037082	156037490	+	0	NA	Intergenic	Intergenic	-11031	NM_001204908	100503355	Mm.484410	NM_001204908	ENSMUSG00000066797	Zfp648	ENSMUSG00000066797|Gm10178|Gm203	zinc finger protein 648	protein-coding
common_peak2-31885-9-4-0.867685311516858-1.36011389749466	chr9	56104007	56104284	+	0	NA	intron (NM_172924, intron 4 of 6)	intron (NM_172924, intron 4 of 6)	-95268	NM_019793	56434	Mm.28484	NM_019793	ENSMUSG00000032324	Tspan3	1700055K04Rik|TM4-A|Tm4sf8	tetraspanin 3	protein-coding
common_peak2-21737-29-37--0.135637432828474-0.313095283157754	chr11	115413174	115413940	+	0	NA	Intergenic	Intergenic	-12201	NM_001002929	445007	Mm.4379	NM_001002929	ENSMUSG00000020739	Nup85	Pcnt1|frount	nucleoporin 85	protein-coding
common_peak1-17453-8-12--0.695217300193522-0.475924844171029	chr7	19076139	19076667	+	0	NA	Intergenic	L1Md_T|LINE|L1	-6905	NM_001029893	574429	Mm.296754	NM_001029893	ENSMUSG00000070799	Psg26	EG574429|cea14	pregnancy-specific glycoprotein 26	protein-coding
common_peak2-31741-14-18--0.348711353085941-0.360333814299795	chr9	15239021	15239824	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-70517	NM_133214	170748	Mm.86572	NM_133214	ENSMUSG00000058173	Smco4	Fn5	single-pass membrane protein with coiled-coil domains 4	protein-coding
common_peak2-31462-26-26-0.173011589994994-0.363124929330838	chr8	105605128	105606109	+	0	NA	Intergenic	L1Md_Gf|LINE|L1	265816	NR_036588	69794	Mm.396139	NR_036588		1600027J07Rik	-	RIKEN cDNA 1600027J07 gene	ncRNA
unique_peak1-422-15-5-1.4272022498345-1.61682445937017	chr1	161035114	161035697	+	0	NA	Intergenic	L1MEc|LINE|L1	-127052	NM_011931	26374	Mm.328135	NM_011931	ENSMUSG00000040782	Rfwd2	AI316802|C80879|Cop1	ring finger and WD repeat domain 2	protein-coding
common_peak2-22310-22-17-0.477359103645092-0.633951497070961	chr13	21362640	21363285	+	0	NA	Intergenic	Intergenic	21593	NM_010343	14780	Mm.1332	NM_010343	ENSMUSG00000004344	Gpx5	AV379049|Arep	glutathione peroxidase 5	protein-coding
common_peak2-21104-18-30--0.641277159158523-0.738267116931589	chr11	52004174	52004951	+	0	NA	Intergenic	MTE2a|LTR|MaLR	22927	NM_207253	276865	Mm.377871	NM_207253	ENSMUSG00000060170	Olfr1371	GA_x6K02T2QP88-3214035-3214970|MOR256-58	olfactory receptor 1371	protein-coding
unique_peak2-37787-5-5--0.289342836727009-0.909929411522249	chr5	118647414	118647813	+	0	NA	intron (NM_172998, intron 11 of 11)	L1MC|LINE|L1	27840	NM_007545	12123	Mm.384468	NM_007545	ENSMUSG00000046607	Hrk	AI838259|Bid3|DP5|harakiri	harakiri, BCL2 interacting protein (contains only BH3 domain)	protein-coding
common_peak1-10955-26-41--0.464418330620298-0.672592695851323	chr15	25914914	25916018	+	0	NA	intron (NM_144523, intron 1 of 5)	intron (NM_144523, intron 1 of 5)	1345	NM_144523	52521	Mm.29145	NM_144523	ENSMUSG00000052253	Zfp622	1110033B05Rik|D15Ertd806e|ZPR9|Znf622	zinc finger protein 622	protein-coding
common_peak2-30941-29-39--0.209638014272252-0.348003640999435	chr8	10665189	10666559	+	0	NA	Intergenic	Intergenic	216580	NR_040705	320014	Mm.403203	NR_040705		B930025P03Rik	-	RIKEN cDNA B930025P03 gene	ncRNA
common_peak1-12722-19-31--0.597312673338314-0.721233599456203	chr18	53245422	53246252	+	0	NA	Intergenic	Intergenic	-90182	NM_026386	67804	Mm.252171	NM_026386	ENSMUSG00000034484	Snx2	0610030A03Rik	sorting nexin 2	protein-coding
unique_peak1-4672-16-2-2.53330114154691-3.78760380288747	chr3	93598129	93598834	+	0	NA	Intergenic	RMER17C-int|LTR|ERVK	-1839	NM_207272	399675	Mm.377924	NM_207272	ENSMUSG00000060256	Tdpoz4	-	TD and POZ domain containing 4	protein-coding
common_peak2-31990-23-36--0.48768586111987-0.652802052802678	chr9	70503002	70503819	+	0	NA	intron (NM_172772, intron 1 of 8)	intron (NM_172772, intron 1 of 8)	1571	NM_172772	235461	Mm.170855	NM_172772	ENSMUSG00000042444	Fam63b	AI465301|B230380D07Rik|mKIAA1164	family with sequence similarity 63, member B	protein-coding
common_peak2-32303-68-138--0.548980293425211-2.03414581212041	chrX	42149258	42150538	+	0	NA	Intergenic	Intergenic	-6524	NM_178739	245404	Mm.55685	NM_178739	ENSMUSG00000045284	Dcaf12l1	9330180J20|A230038L21Rik|Decaf12l1|Wdr40b	DDB1 and CUL4 associated factor 12-like 1	protein-coding
unique_peak2-35920-5-11--1.28934283672701-1.477227296591	chr19	5913182	5913678	+	0	NA	promoter-TSS (NM_001291078)	promoter-TSS (NM_001291078)	-559	NM_001291078	19708	Mm.2651	NM_011262	ENSMUSG00000024826	Dpf2	2210010M07Rik|BAF45D|Req|ubi-d4	D4, zinc and double PHD fingers family 2	protein-coding
unique_peak1-1664-27-4-2.66961785600787-5.68425908349381	chr13	63324495	63325771	+	0	NA	intron (NM_001289926, intron 11 of 15)	intron (NM_001289926, intron 11 of 15)	-16205	NR_110520	72061	Mm.188105	NM_028079	ENSMUSG00000021458	2010111I01Rik	2300006M17Rik|AP-O|Aopep	RIKEN cDNA 2010111I01 gene	protein-coding
unique_peak2-38903-2-6--1.72480917832092-1.26211192963361	chr8	13208773	13209253	+	0	NA	Intergenic	Intergenic	-8389	NM_025768	66790	Mm.34901	NM_025768	ENSMUSG00000038515	Grtp1	5430401C05Rik|C81211|Tbc1d6	GH regulated TBC protein 1	protein-coding
common_peak2-27393-10-5-0.771452844287613-1.33892459842472	chr3	87960557	87960955	+	0	NA	intron (NM_133665, intron 3 of 10)	intron (NM_133665, intron 3 of 10)	14439	NM_133665	17261	Mm.28184	NM_133665	ENSMUSG00000001419	Mef2d	C80750	myocyte enhancer factor 2D	protein-coding
unique_peak1-1845-12-4-1.32684789020028-2.04196296489515	chr14	47490382	47491055	+	0	NA	Intergenic	Intergenic	-11922	NM_028966	74480	Mm.214454	NM_028966	ENSMUSG00000021838	Samd4	1700024G08Rik|1700111L17Rik|4933436G17Rik|Samd4a|Smaug|Smaug1	sterile alpha motif domain containing 4	protein-coding
common_peak1-8915-69-100--0.0630690354930623-0.310950811460187	chr11	51605763	51607230	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	29331	NM_025535	66397	Mm.196592	NM_025535	ENSMUSG00000020386	Sar1b	2310075M17Rik|2900019I22Rik|CMRD|Sara1b|Sara2|Sarb	SAR1 gene homolog B (S. cerevisiae)	protein-coding
unique_peak1-6762-11-0-3.50869358425161-3.61235994796777	chr8	57513844	57514287	+	0	NA	Intergenic	Intergenic	871696	NM_175939	244486	Mm.67684	NM_175939	ENSMUSG00000046258	Adam29	-	a disintegrin and metallopeptidase domain 29	protein-coding
common_peak2-27774-11-14--0.398197011356905-0.379391706698377	chr3	132983536	132984255	+	0	NA	intron (NM_146141, intron 1 of 11)	intron (NM_146141, intron 1 of 11)	10821	NM_146141	74776	Mm.210305	NM_146141	ENSMUSG00000028013	Ppa2	1110013G13Rik|Sid6306	pyrophosphatase (inorganic) 2	protein-coding
unique_peak1-6225-14-5-1.31425365963649-1.4372489031793	chr7	4098383	4099039	+	0	NA	3' UTR (NM_172736, exon 15 of 15)	3' UTR (NM_172736, exon 15 of 15)	2763	NM_175529	243813	Mm.347643	NM_175529	ENSMUSG00000043432	Leng9	9530024C23Rik|F630035L11Rik	leukocyte receptor cluster (LRC) member 9	protein-coding
common_peak2-24559-8-6-0.197867495889966-1.03789460276074	chr17	28691358	28691794	+	0	NA	Intergenic	ID_B1|SINE|B4	3870	NR_105935	102465585		NR_105935		Mir6969	mmu-mir-6969	microRNA mir-6969	ncRNA
unique_peak2-34592-8-26--1.7496650842159-2.47979361197949	chr14	70074881	70075973	+	0	NA	intron (NM_033325, intron 7 of 13)	intron (NM_033325, intron 7 of 13)	-16628	NR_105915	102465573		NR_105915		Mir6950	mmu-mir-6950	microRNA mir-6950	ncRNA
unique_peak1-6977-10-5-0.771452844287613-1.33892459842472	chr8	119559012	119559545	+	0	NA	intron (NM_029686, intron 25 of 42)	(CA)n|Simple_repeat|Simple_repeat	-41929	NM_026572	68133	Mm.258462	NM_026572	ENSMUSG00000034424	Gcsh	1100001L02Rik|5730591C18Rik	glycine cleavage system protein H (aminomethyl carrier)	protein-coding
common_peak2-32332-28-33--0.0345037214288766-0.301029995664001	chrX	74245693	74246550	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-397858	NM_001201395	74987	Mm.107996	NM_001201395	ENSMUSG00000079525	4930468A15Rik	-	RIKEN cDNA 4930468A15 gene	protein-coding
common_peak2-32088-21-71--1.60043573617608-5.57954964143456	chr9	96782527	96784074	+	0	NA	intron (NM_001289645, intron 1 of 6)	intron (NM_001289645, intron 1 of 6)	6593	NM_001289646	235534	Mm.233031	NM_153420	ENSMUSG00000043587	Pxylp1	9430094M07Rik|Acpl2|BB177120|C130099A20Rik	2-phosphoxylose phosphatase 1	protein-coding
common_peak1-14860-15-33--1.07529809069468-1.60877160026698	chr3	95228289	95229089	+	0	NA	Intergenic	IAPEY3-int|LTR|ERVK	-2582	NR_033637	100043305	Mm.412052	NR_033637		Gm4349	-	SET domain, bifurcated 1 pseudogene	pseudo
common_peak2-27391-9-12--0.510826311736872-0.394412252720706	chr3	87929711	87930108	+	0	NA	Intergenic	RSINE1|SINE|B4	-16408	NM_133665	17261	Mm.28184	NM_133665	ENSMUSG00000001419	Mef2d	C80750	myocyte enhancer factor 2D	protein-coding
common_peak2-21634-19-19-0.0807592317743238-0.322753776620787	chr11	101276863	101277657	+	0	NA	intron (NM_144829, intron 2 of 11)	B1_Mus1|SINE|Alu	1487	NM_144829	69684	Mm.146283	NM_144829	ENSMUSG00000075528	Aarsd1	1110069E20Rik|2310044P18Rik|AA589600|AlaX|AlaXp-II	alanyl-tRNA synthetase domain containing 1	protein-coding
unique_peak2-35781-5-7--0.704380336005853-1.01466476204226	chr18	54900157	54900638	+	0	NA	Intergenic	Intergenic	128999	NR_045400	328957	Mm.402781	NR_045400		9330117O12Rik	9330117O12	RIKEN cDNA 9330117O12 gene	ncRNA
common_peak1-17810-27-23-0.40658345017408-0.622271369641148	chr7	101320779	101321857	+	0	NA	Intergenic	(TAGA)n|Simple_repeat|Simple_repeat	1092929	NM_021427	58238	Mm.113787	NM_021427		Fam181b	A830059I20Rik|AB041569	family with sequence similarity 181, member B	protein-coding
unique_peak2-38407-0-4--3.16205902536157-1.10720996964787	chr7	19884814	19885182	+	0	NA	Intergenic	URR1B|DNA|MER1_type	8580	NM_001025364	20167	Mm.24142	NM_013648	ENSMUSG00000030401	Rtn2	MMS10-P|Ms10p|NSPLI|Nspl1	reticulon 2 (Z-band associated protein)	protein-coding
unique_peak2-34291-8-10--0.454209200689727-1.078512453669	chr13	74493437	74493887	+	0	NA	intron (NM_001168658, intron 2 of 3)	intron (NM_001168658, intron 2 of 3)	5897	NM_001168658	67433	Mm.101586	NM_024201		Ccdc127	0610011N22Rik|5430420E17Rik|A430066A18|AI256405|AW050060|C130002N06	coiled-coil domain containing 127	protein-coding
common_peak2-29204-11-12--0.191746133889479-0.310474156842889	chr5	136962052	136962808	+	0	NA	intron (NM_001291238, intron 1 of 22)	intron (NM_001291238, intron 1 of 22)	79421	NM_001291239	13047	Mm.320317	NM_009986	ENSMUSG00000029705	Cux1	CDP|Cutl1|Cux|Cux-1	cut-like homeobox 1	protein-coding
common_peak1-10110-33-36-0.121884196896579-0.346766333527252	chr13	29504396	29505678	+	0	NA	intron (NM_144536, intron 13 of 15)	intron (NM_144536, intron 13 of 15)	396913	NR_045075	77920	Mm.197051	NR_045073	ENSMUSG00000086363	A330102I10Rik	-	RIKEN cDNA A330102I10 gene	ncRNA
unique_peak2-36014-6-16--1.52206473087004-1.32521814697968	chr19	40561383	40561771	+	0	NA	intron (NM_178362, intron 1 of 28)	intron (NM_178362, intron 1 of 28)	26649	NM_178362	20411	Mm.210815	NM_009166		Sorbs1	2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296	sorbin and SH3 domain containing 1	protein-coding
unique_peak2-38085-1-13--3.43441193227435-3.36932189928148	chr6	54166226	54166724	+	0	NA	intron (NM_001163640, intron 4 of 12)	intron (NM_001163640, intron 4 of 12)	-56341	NM_023543	69993	Mm.321147	NM_023543	ENSMUSG00000004633	Chn2	1700026N20Rik|4930557O16Rik|ARHGAP3|Bch	chimerin 2	protein-coding
unique_peak1-120-17-1-3.21829633820504-4.59734841376773	chr1	60704669	60705386	+	0	NA	Intergenic	Intergenic	-81418	NM_001045513	77300	Mm.440325	NM_001045513	ENSMUSG00000026014	Raph1	9430025M21Rik|C730009O10Rik|Lpd	Ras association (RalGDS/AF-6) and pleckstrin homology domains 1	protein-coding
common_peak2-25458-221-213-0.873604694234967-11.975169512099	chr19	4212726	4216336	+	0	NA	intron (NM_019952, intron 1 of 2)	CpG	139	NM_019952	56708	Mm.347919	NM_019952		Clcf1	Bsf3|CLC	cardiotrophin-like cytokine factor 1	protein-coding
common_peak1-15990-26-22-0.404337136101449-0.569352520859861	chr5	32745316	32746665	+	0	NA	Intergenic	Intergenic	-15353	NM_172707	19046	Mm.241931	NM_172707		Ppp1cb	1200010B19	protein phosphatase 1, catalytic subunit, beta isoform	protein-coding
unique_peak1-2259-12-1-2.64877598508764-3.36932189928148	chr15	77855379	77856054	+	0	NA	intron (NM_007583, intron 1 of 3)	intron (NM_007583, intron 1 of 3)	-54462	NM_018749	55944	Mm.3955	NM_018749	ENSMUSG00000016554	Eif3d	66/67kDa|AA407891|Eif3s7|eIF3p66	eukaryotic translation initiation factor 3, subunit D	protein-coding
common_peak1-19301-20-33--0.599388056659146-0.781990829058356	chr9	121718167	121718981	+	0	NA	intron (NM_028384, intron 11 of 15)	intron (NM_028384, intron 11 of 15)	-16949	NM_029095	74770	Mm.44195	NM_029095	ENSMUSG00000032523	Hhatl	1110011D13Rik|Gup1	hedgehog acyltransferase-like	protein-coding
common_peak1-13921-23-38--0.563634714353168-0.792515101870073	chr2	84634750	84635627	+	0	NA	Intergenic	RMER17D2|LTR|ERVK	-3797	NM_019949	56791	Mm.38261	NM_019949	ENSMUSG00000027078	Ube2l6	2810489I21Rik|RIG-B|UBCH8|Ubce8|Ubcm8	ubiquitin-conjugating enzyme E2L 6	protein-coding
common_peak2-22216-9-8-0.0196884049619079-1.03275496310833	chr12	112678610	112679198	+	0	NA	Intergenic	Intergenic	-1968	NM_009396	21928	Mm.255332	NM_009396	ENSMUSG00000021281	Tnfaip2	B94|Exoc3l3|M-sec|Tnfip2|tnfb94	tumor necrosis factor, alpha-induced protein 2	protein-coding
common_peak1-14297-8-9--0.316705676939792-1.03275496310833	chr2	158512439	158512948	+	0	NA	intron (NM_001159662, intron 1 of 10)	intron (NM_001159662, intron 1 of 10)	19822	NM_001159662	228852	Mm.150540	NM_153089	ENSMUSG00000037754	Ppp1r16b	ANKRD4|C130078N17Rik|TIMAP|Wdt4	protein phosphatase 1, regulatory (inhibitor) subunit 16B	protein-coding
common_peak1-11986-13-20--0.613845392140992-0.532159081577619	chr17	12118575	12119381	+	0	NA	intron (NM_016694, intron 9 of 11)	intron (NM_016694, intron 9 of 11)	-42923	NR_045808	52027	Mm.442257	NR_045808		D17Ertd648e	-	DNA segment, Chr 17, ERATO Doi 648, expressed	ncRNA
common_peak2-31191-42-40-0.3847773232491-0.755494033265326	chr8	56550517	56551486	+	0	NA	Intergenic	Intergenic	510920	NM_001253756	234267	Mm.241700	NM_153581	ENSMUSG00000031517	Gpm6a	Gpm6|M6A	glycoprotein m6a	protein-coding
common_peak2-24789-45-51-0.15991830720378-0.398713855155082	chr17	65642683	65644169	+	0	NA	intron (NM_001289485, intron 14 of 15)	L1Md_T|LINE|L1	246696	NM_001008973	381107	Mm.141275	NM_001008973	ENSMUSG00000045036	Tmem232	E130009J12Rik|Gm940|Tes13-L|Tes13-S	transmembrane protein 232	protein-coding
unique_peak1-4754-8-4-0.683294323060208-1.21878474469819	chr3	116595171	116595701	+	0	NA	intron (NM_009146, intron 9 of 16)	intron (NM_009146, intron 9 of 16)	30838	NM_009146	20321	Mm.66293	NM_009146	ENSMUSG00000033386	Frrs1	AI131732|Sdfr2	ferric-chelate reductase 1	protein-coding
unique_peak1-1595-15-2-2.4272022498345-3.53487848679804	chr13	34865851	34866389	+	0	NA	Intergenic	Intergenic	34609	NM_138746	108161	Mm.41991	NM_138746	ENSMUSG00000038246	Fam50b	D0H6S2654E|X5L|XAP-5-like	family with sequence similarity 50, member B	protein-coding
unique_peak2-36131-3-6--1.22133801201688-1.08602067057793	chr2	12301662	12302062	+	0	NA	intron (NM_024185, intron 10 of 14)	L2c|LINE|L2	39225	NM_024185	66960	Mm.34059	NM_024185	ENSMUSG00000026767	Fam188a	1810041E18Rik|2310047O13Rik|5830410F13Rik|AI447827|AW111958	family with sequence similarity 188, member A	protein-coding
common_peak2-31718-15-13-0.204809828498052-0.368541233333383	chr9	3403829	3404512	+	0	NA	promoter-TSS (NM_027545)	promoter-TSS (NM_027545)	85	NM_027545	244672	Mm.245482	NM_027545	ENSMUSG00000025898	Cwf19l2	3230401L03Rik|9030209E10	CWF19-like 2, cell cycle control (S. pombe)	protein-coding
common_peak1-17380-23-18-0.473839991065495-0.618644178587689	chr7	126565587	126566561	+	0	NA	Intergenic	MIR|SINE|MIR	36712	NM_025989	67133	Mm.46403	NM_025989	ENSMUSG00000030954	Gp2	2310037I18Rik|AV060639	glycoprotein 2 (zymogen granule membrane)	protein-coding
unique_peak1-3139-17-6-1.41094141614743-1.84350559086818	chr18	36410639	36411428	+	0	NA	Intergenic	Intergenic	-29783	NM_008989	19290	Mm.231802	NM_008989		Pura	CAGER-1|Pur-alpha|ssCRE-BP	purine rich element binding protein A	protein-coding
unique_peak2-33444-6-12--1.13504160776079-1.45089835786865	chr11	62232666	62233206	+	0	NA	intron (NM_011308, intron 4 of 44)	intron (NM_011308, intron 4 of 44)	19081	NM_001252313	20185	Mm.271814	NM_011308	ENSMUSG00000018501	Ncor1	5730405M06Rik|A230020K14Rik|N-CoR|RIP13|Rxrip13|mKIAA1047	nuclear receptor co-repressor 1	protein-coding
common_peak2-21951-90-117-0.17166197658031-0.523540816573272	chr12	31949504	31950397	+	0	NA	promoter-TSS (NM_008482)	promoter-TSS (NM_008482)	-209	NM_008482	16777	Mm.172674	NM_008482	ENSMUSG00000002900	Lamb1	C77966|C80098|C81607|D130003D08Rik|Lamb-1|Lamb1-1	laminin B1	protein-coding
common_peak1-11275-38-38-0.286050440436282-0.554098881286537	chr15	81858260	81859753	+	0	NA	intron (NM_010247, intron 7 of 12)	intron (NM_010247, intron 7 of 12)	12207	NM_010247	14375	Mm.288809	NM_010247	ENSMUSG00000022471	Xrcc6	70kDa|G22p1|Ku70	X-ray repair complementing defective repair in Chinese hamster cells 6	protein-coding
common_peak2-29786-11-5-0.923731083530457-1.477227296591	chr6	89352460	89352865	+	0	NA	intron (NM_001167736, intron 5 of 6)	intron (NM_001167736, intron 5 of 6)	-40055	NM_008881	18844	Mm.3789	NM_008881	ENSMUSG00000030084	Plxna1	2600013D04Rik|NOV|PlexA1|Plxn1|mKIAA4053	plexin A1	protein-coding
unique_peak1-1611-10-2-1.77145284428761-2.09384600808989	chr13	40994766	40995210	+	0	NA	intron (NM_008105, intron 1 of 2)	intron (NM_008105, intron 1 of 2)	12861	NM_008105	14538	Mm.314757	NM_008105	ENSMUSG00000021360	Gcnt2	5330430K10Rik|IGnT|IGnTA|IGnTB|IGnTC	glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	protein-coding
unique_peak1-4610-7-2-1.21412832957703-1.45399745587252	chr3	65884707	65885179	+	0	NA	intron (NM_145820, intron 12 of 13)	intron (NM_145820, intron 12 of 13)	-122796	NM_019937	56706	Mm.175612	NM_019937	ENSMUSG00000027829	Ccnl1	2610030E23Rik|AU018493|Ccnl|ania-6a	cyclin L1	protein-coding
unique_peak1-1701-10-1-2.35641534500877-2.57096726280955	chr13	91224703	91225194	+	0	NA	intron (NM_025770, intron 3 of 7)	intron (NM_025770, intron 3 of 7)	138644	NM_025770	66795	Mm.235385	NM_025770	ENSMUSG00000021619	Atg10	5330424L23Rik|5430428K15Rik|AI852123|APG10|Agp10|Apg10l|Apg10p|Atg10l	autophagy related 10	protein-coding
common_peak2-30619-8-5-0.420259917226415-1.10484139239135	chr7	90319861	90320217	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-200138	NR_045855	71285	Mm.76818	NR_045855		4933430H16Rik	-	RIKEN cDNA 4933430H16 gene	ncRNA
common_peak2-28980-22-39--0.674643989799958-0.97145127402441	chr5	105518849	105520271	+	0	NA	intron (NM_172777, intron 5 of 10)	L1Md_T|LINE|L1	19751	NM_172777	236573	Mm.425261	NM_172777	ENSMUSG00000029298	Gbp9	-	guanylate-binding protein 9	protein-coding
unique_peak1-2835-9-4-0.867685311516858-1.36011389749466	chr17	28207520	28208048	+	0	NA	intron (NM_013687, intron 5 of 9)	intron (NM_013687, intron 5 of 9)	9745	NM_013687	21463	Mm.29758	NM_013687	ENSMUSG00000062859	Tcp11	D17Ken1|Tcp-11	t-complex protein 11	protein-coding
common_peak1-15708-15-8-0.842239749113344-0.891319708951327	chr4	140648752	140649349	+	0	NA	intron (NM_177867, intron 4 of 14)	intron (NM_177867, intron 4 of 14)	4790	NM_177867	329972	Mm.247201	NM_177867	ENSMUSG00000045004	Spata21	4933414G08	spermatogenesis associated 21	protein-coding
common_peak1-13286-38-16-1.48398981804819-3.936930499713	chr19	38036756	38038110	+	0	NA	intron (NM_001099634, intron 18 of 52)	L1MB3|LINE|L1	80634	NM_001099634	226101	Mm.34674	NM_177035	ENSMUSG00000048612	Myof	2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3	myoferlin	protein-coding
common_peak2-22580-8-8--0.164702583494742-1.00793137938329	chr13	67375483	67375912	+	0	NA	Intergenic	L1Md_A|LINE|L1	-3833	NR_033540	100038627	Mm.387089	NR_033540		F630042J09Rik	ENSMUSG00000074823	RIKEN cDNA F630042J09 gene	ncRNA
common_peak2-31429-14-20--0.493101262421116-0.456667090758524	chr8	94857491	94858110	+	0	NA	intron (NR_110452, intron 3 of 3)	intron (NR_110452, intron 3 of 3)	22219	NR_110452	71296	Mm.86664	NR_033641	ENSMUSG00000031736	Crnde	4933436C20Rik	colorectal neoplasia differentially expressed (non-protein coding)	ncRNA
common_peak2-23562-9-6-0.382258484346616-1.11707584880836	chr15	79357327	79357698	+	0	NA	TTS (NM_199080)	TTS (NM_199080)	5835	NM_152806	67040	Mm.29644	NM_152806	ENSMUSG00000055065	Ddx17	2610007K22Rik|A430025E01Rik|AI047725|C80929|Gm926|p72	DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	protein-coding
common_peak1-10304-35-44--0.0604828378671707-0.303525995925004	chr13	65112208	65113577	+	0	NA	Intergenic	Intergenic	-21474	NM_001083890	238683	Mm.295543	NM_001083890	ENSMUSG00000074849	Spata31d1c	4932441B19Rik|Fam75d1c	spermatogenesis associated 31 subfamily D, member 1C	protein-coding
common_peak2-22263-28-23-0.467996619100306-0.690880484874617	chr13	5843500	5844463	+	0	NA	Intergenic	Intergenic	13357	NR_045891	71867	Mm.179181	NR_045891		1700016G22Rik	-	RIKEN cDNA 1700016G22 gene	ncRNA
common_peak1-10296-32-35-0.109167017777348-0.348003640999429	chr13	63562958	63563856	+	0	NA	Intergenic	Intergenic	-30354	NM_001282942	14088	Mm.126106	NM_007985	ENSMUSG00000021461	Fancc	Facc	Fanconi anemia, complementation group C	protein-coding
common_peak1-11702-68-67-0.482497938047957-1.35721122071865	chr16	31597087	31599455	+	0	NA	Intergenic	Intergenic	-65258	NM_001252435	13383	Mm.382	NM_007862	ENSMUSG00000022770	Dlg1	B130052P05Rik|Dlgh1|E-dlg/SAP97|SAP-97|SAP97|mKIAA4187	discs, large homolog 1 (Drosophila)	protein-coding
common_peak1-12391-29-26-0.357402578451643-0.590428395010953	chr17	70738419	70739478	+	0	NA	Intergenic	Intergenic	-35184	NM_177639	224997	Mm.311840	NM_027712	ENSMUSG00000003279	Dlgap1	4933422O14Rik|9630002F18|AI845682|AI848168|BB075781|D17Bwg0511e|GKAP/SAPAP|GKPA/SAPAP|Gkap|Sapap1|mKIAA4162	discs, large (Drosophila) homolog-associated protein 1	protein-coding
common_peak2-30946-46-71--0.271929058193511-0.501837478813381	chr8	23034102	23036598	+	0	NA	Intergenic	Intergenic	7832	NM_139222	246082	Mm.390015	NM_139222	ENSMUSG00000048500	Defb15	BD-15	defensin beta 15	protein-coding
unique_peak1-1645-18-10-0.853487532591054-1.03889213727317	chr13	53297549	53298527	+	0	NA	intron (NM_013846, intron 1 of 8)	intron (NM_013846, intron 1 of 8)	83440	NM_013846	26564	Mm.342774	NM_013846	ENSMUSG00000021464	Ror2	Ntrkr2|mRor2	receptor tyrosine kinase-like orphan receptor 2	protein-coding
common_peak2-22678-15-20--0.380152672223105-0.397739447719386	chr13	98015644	98016262	+	0	NA	exon (NM_007930, exon 2 of 3)	exon (NM_007930, exon 2 of 3)	4893	NM_007930	13803	Mm.241073	NM_007930	ENSMUSG00000041773	Enc1	Nrpb|PIG10	ectodermal-neural cortex 1	protein-coding
common_peak2-29221-24-20-0.400892479988956-0.591915184368645	chr5	137630300	137631210	+	0	NA	Intergenic	Intergenic	-38678	NM_201373	384309	Mm.100647	NM_201373		Trim56	A130009K11Rik|Gm452|RNF109	tripartite motif-containing 56	protein-coding
unique_peak2-33025-6-10--0.894033508256995-1.21398586181642	chr10	68249257	68249820	+	0	NA	Intergenic	Intergenic	63044	NM_177794	327766	Mm.2479	NM_177794	ENSMUSG00000060044	Tmem26	3230401A06|AI195372	transmembrane protein 26	protein-coding
unique_peak1-5262-7-1-1.79909083029819-1.80617997398389	chr5	64367445	64368019	+	0	NA	Intergenic	Intergenic	-7596	NM_145923	100532	Mm.243632	NM_145923	ENSMUSG00000047881	Rell1	AA536743	RELT-like 1	protein-coding
unique_peak2-35710-1-7--2.62705701021674-1.80617997398389	chr18	33080687	33081060	+	0	NA	Intergenic	Intergenic	-17822	NM_009793	12326	Mm.222329	NM_009793	ENSMUSG00000038128	Camk4	A430110E23Rik|AI666733|CaMKIV|CaMKIV/Gr|D18Bwg0362e	calcium/calmodulin-dependent protein kinase IV	protein-coding
common_peak1-11361-15-13-0.204809828498052-0.368541233333383	chr15	89475592	89476301	+	0	NA	Intergenic	Lx2|LINE|L1	-53592	NM_026817	68708	Mm.23258	NM_026817	ENSMUSG00000022621	Rabl2	1110031N17Rik|AW549303|Rabl2a	RAB, member RAS oncogene family-like 2	protein-coding
unique_peak2-33307-3-8--1.58390809140159-1.39487600375387	chr11	5541922	5542247	+	0	NA	intron (NM_023816, intron 20 of 26)	L1M2|LINE|L1	65618	NM_026080	64660	Mm.7328	NM_026080	ENSMUSG00000020477	Mrps24	3110030K20Rik|AI414579|Rpms24	mitochondrial ribosomal protein S24	protein-coding
common_peak2-27390-15-19--0.309763344331706-0.356936432242222	chr3	87909970	87910714	+	0	NA	intron (NM_001033484, intron 22 of 37)	intron (NM_001033484, intron 22 of 37)	24369	NM_001033484	404710	Mm.331133	NM_001033484	ENSMUSG00000028068	Iqgap3	AI593484|D030034H08	IQ motif containing GTPase activating protein 3	protein-coding
common_peak1-14977-46-15-1.8979959432488-6.57912882493891	chr3	106787264	106788692	+	0	NA	Intergenic	Intergenic	-51102	NM_008418	16491	Mm.30640	NM_008418	ENSMUSG00000047959	Kcna3	Kca1-3|Kv1.3|Mk-3	potassium voltage-gated channel, shaker-related subfamily, member 3	protein-coding
unique_peak2-38929-5-6--0.511735258063458-0.947717972411649	chr8	22784313	22784696	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	8235	NM_010039	13238	Mm.465152	NM_010039		Defa4	Crp4|Defa28|Defcr4	defensin, alpha, 4	protein-coding
unique_peak1-3847-8-5-0.420259917226415-1.10484139239135	chr2	5166172	5166714	+	0	NA	Intergenic	Intergenic	107621	NM_028804	74186	Mm.274715	NM_028804	ENSMUSG00000026676	Ccdc3	2310045O21Rik	coiled-coil domain containing 3	protein-coding
common_peak2-22419-17-18--0.0296311752385474-0.306899554715732	chr13	36731015	36731756	+	0	NA	Intergenic	Lx7|LINE|L1	94961	NM_153529	68404	Mm.232930	NM_153529	ENSMUSG00000039114	Nrn1	0710008J23Rik|Cpg15|Nrn	neuritin 1	protein-coding
unique_peak2-36179-7-12--0.901348887842903-1.31827279259406	chr2	29826640	29827170	+	0	NA	intron (NM_001177668, intron 1 of 55)	intron (NM_001177668, intron 1 of 55)	5825	NM_001076554	20740	Mm.204969	NM_001076554	ENSMUSG00000057738	Sptan1	2610027H02Rik|Spna-2|Spna2	spectrin alpha, non-erythrocytic 1	protein-coding
unique_peak2-37841-7-12--0.901348887842903-1.31827279259406	chr5	135370008	135370530	+	0	NA	Intergenic	Intergenic	12334	NM_029681	76629	Mm.159750	NM_029681	ENSMUSG00000040576	Wbscr28	1700111I05Rik	Williams-Beuren syndrome chromosome region 28 (human)	protein-coding
common_peak2-27948-12-16--0.4386868561627-0.368541233333383	chr4	32657073	32657638	+	0	NA	intron (NR_026843, intron 1 of 4)	intron (NR_026843, intron 1 of 4)	1282	NR_026843	414068	Mm.389550	NR_026843	ENSMUSG00000086150	Bach2os	-	BTB and CNC homology 2, opposite strand	ncRNA
common_peak1-14070-11-14--0.398197011356905-0.379391706698377	chr2	120730651	120731084	+	0	NA	intron (NM_009461, intron 29 of 46)	MIR|SINE|MIR	54475	NR_038350	100502700	Mm.330516	NR_038349	ENSMUSG00000087519	AV039307	-	expressed sequence AV039307	ncRNA
common_peak1-18695-34-30-0.427872216614391-0.737357778720995	chr8	121187188	121188235	+	0	NA	intron (NM_019707, intron 2 of 13)	intron (NM_019707, intron 2 of 13)	380056	NM_019707	12554	Mm.334841	NM_019707	ENSMUSG00000031841	Cdh13	4932416G01Rik|Cdht|T-cadherin|Tcad	cadherin 13	protein-coding
common_peak2-24147-49-65--0.0381102963332696-0.302713324468805	chr16	38087609	38088859	+	0	NA	promoter-TSS (NM_019827)	promoter-TSS (NM_019827)	-853	NM_019827	56637	Mm.394930	NM_019827	ENSMUSG00000022812	Gsk3b	7330414F15Rik|8430431H08Rik|C86142|GSK-3|GSK-3beta|GSK3	glycogen synthase kinase 3 beta	protein-coding
common_peak2-24508-2-7--1.91745425626332-1.45399745587252	chr17	26538334	26538580	+	0	NA	Intergenic	Intergenic	-13453	NM_001081656	240055	Mm.133211	NM_001081656	ENSMUSG00000034413	Neurl1b	C230078M08Rik|EG240055	neuralized homolog 1b (Drosophila)	protein-coding
common_peak1-9779-13-9-0.456543935750406-0.53895475198017	chr12	56696720	56697504	+	0	NA	Intergenic	MTD|LTR|MaLR	-2792	NM_020287	56856	Mm.114886	NM_020287	ENSMUSG00000045440	Insm2	Mlt1	insulinoma-associated 2	protein-coding
unique_peak2-32895-2-6--1.72480917832092-1.26211192963361	chr10	16554560	16554921	+	0	NA	Intergenic	(TAA)n|Simple_repeat|Simple_repeat	260848	NR_038020	100504235	Mm.84044	NR_038020		Gm20125	-	predicted gene, 20125	ncRNA
unique_peak1-3601-15-6-1.20480982849805-1.32521814697968	chr19	32224969	32225594	+	0	NA	intron (NM_144792, intron 6 of 9)	MLT1A|LTR|MaLR	-47651	NM_018830	54447	Mm.491229	NM_018830	ENSMUSG00000024887	Asah2	AI585898	N-acylsphingosine amidohydrolase 2	protein-coding
unique_peak2-39679-1-19--3.94898510510411-4.59734841376773	chr9	108578142	108578875	+	0	NA	intron (NM_020520, intron 3 of 8)	intron (NM_020520, intron 3 of 8)	14079	NM_020520	57279	Mm.29666	NM_020520	ENSMUSG00000032602	Slc25a20	1110007P09Rik|C78826|Cact|mCAC	solute carrier family 25 (mitochondrial carnitine/acylcarnitine translocase), member 20	protein-coding
unique_peak1-4585-17-4-1.89636824331768-2.60953805094651	chr3	57387321	57388014	+	0	NA	Intergenic	Intergenic	-7835	NM_001168281	97064	Mm.405029	NM_133784	ENSMUSG00000027803	Wwtr1	2310058J06Rik|2610021I22Rik|C78399|Taz	WW domain containing transcription regulator 1	protein-coding
common_peak1-12266-8-16--1.08224042330277-0.891319708951328	chr17	40934395	40934908	+	0	NA	Intergenic	L1Md_T|LINE|L1	-3556	NM_009420	22024	Mm.1296	NM_009420	ENSMUSG00000023930	Crisp2	CRISP-2|GAPDL5|Tpx-1|Tpx1	cysteine-rich secretory protein 2	protein-coding
common_peak1-11633-11-10-0.0492619656143161-0.31137425193576	chr16	21246021	21246514	+	0	NA	Intergenic	Intergenic	9872	NR_106145	102465781		NR_106145	miRBase:MI0025025	Mir7680	mmu-mir-7680	microRNA mir-7680	ncRNA
common_peak2-27069-28-34--0.0763238971235038-0.304271119602326	chr3	121634749	121636241	+	0	NA	Intergenic	Intergenic	-20749	NM_172525	214137	Mm.229287	NM_172525	ENSMUSG00000039831	Arhgap29	6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1	Rho GTPase activating protein 29	protein-coding
unique_peak2-38743-6-6--0.241956811677302-0.947717972411649	chr7	113590865	113591292	+	0	NA	Intergenic	Lx3A|LINE|L1	-6491	NR_003967	209380	Mm.461779	NM_001001318	ENSMUSG00000053541	Gm4759	EG209380	GTPase, very large interferon inducible 1 pseudogene	pseudo
common_peak1-19272-17-11-0.633333837483882-0.769930178837768	chr9	116232219	116232916	+	0	NA	Intergenic	Intergenic	-148086	NM_009371	21813	Mm.172346	NM_009371	ENSMUSG00000032440	Tgfbr2	1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII	transforming growth factor, beta receptor II	protein-coding
common_peak1-18341-30-13-1.36232048743427-2.74004546941311	chr8	65128942	65129820	+	0	NA	Intergenic	L1Md_A|LINE|L1	-300648	NM_001252620	72902	Mm.334552	NM_023689	ENSMUSG00000054162	Spock3	2900045C01Rik|AI428471|mKIAA4039	sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	protein-coding
common_peak1-18626-139-211-0.0802959129530008-0.385405508894171	chr8	109778376	109779730	+	0	NA	Intergenic	Intergenic	-38317	NM_018823	54446	Mm.390057	NM_018823	ENSMUSG00000003847	Nfat5	AI225870|B130038B15Rik|CAG-8|CAG80|NFATL1|OREBP|TonEBP|mKIAA0827|nfatz	nuclear factor of activated T cells 5	protein-coding
common_peak1-11043-68-99--0.0738954104764282-0.318940315610422	chr15	44618860	44620259	+	0	NA	promoter-TSS (NM_001032727)	promoter-TSS (NM_001032727)	50	NM_176998	319613	Mm.207715	NM_176998	ENSMUSG00000022340	Sybu	Golsyn	syntabulin (syntaxin-interacting)	protein-coding
unique_peak1-5868-13-2-2.19350952991661-3.03832868024006	chr6	85380926	85381540	+	0	NA	promoter-TSS (NM_144918)	promoter-TSS (NM_144918)	-737	NM_144918	232187	Mm.219946	NM_144918	ENSMUSG00000033706	Smyd5	AW536703|NN8-4AG|Rai15|Rrg1	SET and MYND domain containing 5	protein-coding
common_peak2-28431-35-41-0.0390528356837434-0.311371317671728	chr4	148558327	148558956	+	0	NA	intron (NM_207682, intron 42 of 46)	B4A|SINE|B4	-17825	NM_001081274	110208	Mm.252080	NM_025801	ENSMUSG00000028961	Pgd	0610042A05Rik|AU019875|C78335	phosphogluconate dehydrogenase	protein-coding
unique_peak1-5893-11-3-1.50869358425161-1.95434855131066	chr6	87040810	87041504	+	0	NA	3' UTR (NM_013528, exon 19 of 19)	3' UTR (NM_013528, exon 19 of 19)	-13583	NM_001167938	52372	Mm.282851	NM_001167937		D6Ertd527e	AU043841	DNA segment, Chr 6, ERATO Doi 527, expressed	protein-coding
unique_peak2-38579-3-8--1.58390809140159-1.39487600375387	chr7	66689920	66690357	+	0	NA	Intergenic	Intergenic	-110619	NR_015479	330544	Mm.9002	NR_015479		C230091D08Rik	-	RIKEN cDNA C230091D08 gene	ncRNA
unique_peak1-2840-8-3-1.00522241794757-1.39487600375387	chr17	28706823	28707302	+	0	NA	Intergenic	Intergenic	-5602	NM_026571	328789	Mm.284760	NM_026571	ENSMUSG00000062252	Lhfpl5	9330179O15Rik|Tmhs|hscy	lipoma HMGIC fusion partner-like 5	protein-coding
common_peak2-28715-6-6--0.241956811677302-0.947717972411649	chr5	35729502	35729925	+	0	NA	Intergenic	Intergenic	-2053	NM_010445	15371	Mm.358606	NM_010445	ENSMUSG00000067438	Hmx1	Nkx5-3	H6 homeobox 1	protein-coding
common_peak2-20629-52-73--0.101193375363251-0.325500527219172	chr10	80560978	80562092	+	0	NA	promoter-TSS (NM_145365)	promoter-TSS (NM_145365)	82	NM_145365	208677	Mm.294693	NM_145365	ENSMUSG00000035041	Creb3l3	BC010786|CREB-H|D10Bur1e	cAMP responsive element binding protein 3-like 3	protein-coding
unique_peak1-1593-13-1-2.77847203063777-3.64038867156802	chr13	34385950	34386569	+	0	NA	intron (NM_001033167, intron 3 of 10)	intron (NM_001033167, intron 3 of 10)	50792	NM_001033167	73102	Mm.23932	NM_001033167	ENSMUSG00000038267	Slc22a23	3110004L20Rik	solute carrier family 22, member 23	protein-coding
unique_peak2-38113-8-13--0.802132504110034-0.562038191119711	chr6	72538272	72538795	+	0	NA	intron (NM_001253692, intron 2 of 11)	intron (NM_001253692, intron 2 of 11)	9874	NM_144917	232089	Mm.167232	NM_144917	ENSMUSG00000056698	Elmod3	AI844780|C330008I15Rik|RBM29|Rbed1	ELMO/CED-12 domain containing 3	protein-coding
unique_peak1-2921-11-0-3.50869358425161-3.61235994796777	chr17	48452056	48452629	+	0	NA	TTS (NM_001033405)	TTS (NM_001033405)	-3145	NM_177083	320148	Mm.123455	NM_177083	ENSMUSG00000043740	B430306N03Rik	Treml6	RIKEN cDNA B430306N03 gene	protein-coding
unique_peak2-33189-6-8--0.60452689106201-1.03789460276074	chr10	98333481	98334033	+	0	NA	Intergenic	Lx9|LINE|L1	-44029	NM_026482	67972	Mm.166944	NM_026482	ENSMUSG00000019943	Atp2b1	2810442I22Rik|E130111D10Rik|Pmca1	ATPase, Ca++ transporting, plasma membrane 1	protein-coding
common_peak1-17565-40-42-0.232710928049-0.490454554604827	chr7	34312721	34313957	+	0	NA	Intergenic	Intergenic	124961	NR_045685	353109	Mm.63867	NR_045685		Scgb2b23-ps	1700028O08Rik|Abpbg23-ps|C2y|Scgb2b1|Scgb2b1-ps	secretoglobin, family 2B, member 23, pseudogene	pseudo
common_peak1-13945-29-61--0.841906229771764-1.84937269552405	chr2	90940206	90941170	+	0	NA	intron (NM_011355, intron 2 of 4)	Lx7|LINE|L1	3734	NM_011355	20375	Mm.1302	NM_011355		Spi1	Dis-1|Dis1|PU.1|Sfpi-1|Sfpi1|Spi-1|Tcfpu1|Tfpu.1	spleen focus forming virus (SFFV) proviral integration oncogene	protein-coding
unique_peak1-4087-7-1-1.79909083029819-1.80617997398389	chr2	71629427	71629954	+	0	NA	intron (NM_001277970, intron 1 of 24)	intron (NM_001277970, intron 1 of 24)	4694	NM_001277970	16403	Mm.225096	NM_008397		Itga6	5033401O05Rik|AI115430|Cd49f|VLA-6	integrin alpha 6	protein-coding
common_peak2-24360-6-8--0.60452689106201-1.03789460276074	chr17	6744448	6744943	+	0	NA	Intergenic	Intergenic	-61693	NM_001166627	100040531	Mm.457987	NM_001166627	ENSMUSG00000095677	Dynlt1f	100040631|Dynlt1e	dynein light chain Tctex-type 1F	protein-coding
common_peak1-17058-11-32--1.53570053510684-2.62629506227042	chr6	99028399	99028927	+	0	NA	intron (NM_053202, intron 4 of 18)	intron (NM_053202, intron 4 of 18)	-50371	NM_001197322	108655	Mm.234965	NM_053202	ENSMUSG00000030067	Foxp1	3110052D19Rik|4932443N09Rik|AI461938|AW494214	forkhead box P1	protein-coding
unique_peak1-1507-13-2-2.19350952991661-3.03832868024006	chr13	3747045	3747723	+	0	NA	Intergenic	Intergenic	56180	NM_027416	70405	Mm.20079	NM_027416	ENSMUSG00000063130	Calml3	2310068O22Rik|AI326174	calmodulin-like 3	protein-coding
unique_peak2-38212-9-10--0.269818212233077-1.05503135781948	chr6	114648552	114649060	+	0	NA	intron (NM_001253718, intron 10 of 19)	intron (NM_001253718, intron 10 of 19)	55687	NM_001253717	74244	Mm.275332	NM_028835	ENSMUSG00000030314	Atg7	1810013K23Rik|Agp7|Apg7l|Atg7l|Gm21553	autophagy related 7	protein-coding
common_peak2-19647-18-32--0.731474968130102-0.907815120698057	chr1	43445761	43446480	+	0	NA	Intergenic	Intergenic	-56476	NM_010879	17974	Mm.389903	NM_010879	ENSMUSG00000066877	Nck2	4833426I10Rik|Grb4|NCKbeta|Nck-2	non-catalytic region of tyrosine kinase adaptor protein 2	protein-coding
common_peak2-24321-16-74--2.11055504822782-8.66277182338968	chr17	67353071	67355119	+	0	NA	intron (NM_008984, intron 7 of 30)	IAPEz-int|LTR|ERVK	21480	NR_049205	100885844		NR_049205		Mir5709	mmu-mir-5709	microRNA mir-5709	ncRNA
common_peak1-18173-20-21-0.0286431659538957-0.306080386793804	chr8	14606947	14608007	+	0	NA	intron (NM_172910, intron 4 of 15)	intron (NM_172910, intron 4 of 15)	-281059	NM_012000	26889	Mm.254027	NM_012000	ENSMUSG00000026317	Cln8	mnd	ceroid-lipofuscinosis, neuronal 8	protein-coding
unique_peak1-3390-36-12-1.77888136802666-4.71961104764085	chr19	4080429	4082415	+	0	NA	Intergenic	Intergenic	-1066	NM_001160253	29866	Mm.46268	NM_013878	ENSMUSG00000024857	Cabp2	-	calcium binding protein 2	protein-coding
common_peak2-28074-55-52-0.476699416589503-1.13944189361449	chr4	77309784	77311312	+	0	NA	intron (NM_011211, intron 2 of 39)	intron (NM_011211, intron 2 of 39)	547251	NM_011211	19266	Mm.184021	NM_011211	ENSMUSG00000028399	Ptprd	1110002J03Rik|3000002J10Rik|B230219D21Rik|R-PTP-delta	protein tyrosine phosphatase, receptor type, D	protein-coding
common_peak1-15088-44-58--0.0607502147933063-0.302918256338863	chr3	129532989	129534591	+	0	NA	intron (NM_026578, intron 1 of 6)	CpG	524	NM_026578	68147	Mm.24873	NM_026578	ENSMUSG00000028010	Gar1	AA409823|AI326794|C430047J18Rik|Nola1	GAR1 ribonucleoprotein homolog (yeast)	protein-coding
common_peak2-31955-3-13--2.22133801201688-2.36932189928148	chr9	65541289	65541816	+	0	NA	3' UTR (NM_172536, exon 10 of 10)	3' UTR (NM_172536, exon 10 of 10)	17197	NM_001301307	18247	Mm.116749	NM_010952	ENSMUSG00000040652	Oaz2	AZ-2|AZ2|Oaz2-ps|Sez15	ornithine decarboxylase antizyme 2	protein-coding
common_peak2-27243-16-21--0.341167976369236-0.392630012299441	chr3	52197756	52198630	+	0	NA	Intergenic	URR1A|DNA|MER1_type	125934	NM_019739	56458	Mm.29891	NM_019739	ENSMUSG00000044167	Foxo1	AI876417|Afxh|FKHR|Fkhr1|Foxo1a	forkhead box O1	protein-coding
common_peak1-18623-29-67--0.975172760635228-2.5182653668895	chr8	109705301	109706355	+	0	NA	intron (NM_025558, intron 4 of 4)	intron (NM_025558, intron 4 of 4)	31267	NM_025558	66427	Mm.20242	NM_025558	ENSMUSG00000031924	Cyb5b	1810044O22Rik|AU015618|Cyb5m	cytochrome b5 type B	protein-coding
common_peak1-16403-50-51-0.340500598337861-0.719772390806927	chr5	125079948	125082151	+	0	NA	intron (NM_011596, intron 1 of 19)	intron (NM_011596, intron 1 of 19)	1416	NM_011596	21871	Mm.1158	NM_011596		Atp6v0a2	8430408C20Rik|AI385560|ATP6a2|AW489264|Atp6n1d|Atp6n2|C76904|ISF|J6B7|SHIF|Stv1|TJ6M|TJ6s|Tj6|V-ATPase 116 kDa|V-ATPase a2	ATPase, H+ transporting, lysosomal V0 subunit A2	protein-coding
unique_peak1-3613-12-3-1.64877598508764-2.36932189928148	chr19	34199522	34200110	+	0	NA	intron (NM_024204, intron 4 of 5)	intron (NM_024204, intron 4 of 5)	24383	NM_023903	78753	Mm.195937	NM_023903	ENSMUSG00000056078	Lipm	4632427C23Rik|AW227514|Lipl3	lipase, family member M	protein-coding
unique_peak2-34210-4-6--0.830815435910851-0.989110657569874	chr13	43319695	43320053	+	0	NA	intron (NM_001033399, intron 1 of 1)	(TATATG)n|Simple_repeat|Simple_repeat	-53004	NM_001252640	67046	Mm.269213	NM_025935	ENSMUSG00000021368	Tbc1d7	2610009C09Rik	TBC1 domain family, member 7	protein-coding
common_peak1-11004-11-5-0.923731083530457-1.477227296591	chr15	36878441	36878967	+	0	NA	Intergenic	Intergenic	58453	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
unique_peak1-6016-8-0-3.00522241794757-2.70926996097583	chr6	108882107	108882567	+	0	NA	Intergenic	L1Md_F2|LINE|L1	103702	NM_138677	192193	Mm.21596	NM_138677	ENSMUSG00000030104	Edem1	A130059K23Rik|EDEM|mKIAA0212	ER degradation enhancer, mannosidase alpha-like 1	protein-coding
common_peak2-32361-9-14--0.717277189204299-0.53895475198017	chrX	97431353	97431830	+	0	NA	intron (NM_001177943, intron 1 of 8)	Lx7|LINE|L1	-144845	NR_030525	751534		NR_030525		Mir676	Mirn676|mmu-mir-676	microRNA 676	ncRNA
common_peak1-14509-7-21--1.66034078833911-1.89173646618541	chr3	19895022	19895463	+	0	NA	TTS (NM_001146323)	TTS (NM_001146323)	38188	NM_007752	12870	Mm.13787	NM_007752	ENSMUSG00000003617	Cp	D3Ertd555e	ceruloplasmin	protein-coding
common_peak1-15838-35-50--0.241055083508991-0.415549183621393	chr5	144768185	144769267	+	0	NA	intron (NM_177682, intron 6 of 14)	ORR1A2-int|LTR|MaLR	6996	NM_177682	231874	Mm.320432	NM_177682	ENSMUSG00000029617	Ccz1	AU022870	CCZ1 vacuolar protein trafficking and biogenesis associated	protein-coding
unique_peak1-989-10-1-2.35641534500877-2.57096726280955	chr11	69445749	69446363	+	0	NA	promoter-TSS (NM_011814)	promoter-TSS (NM_011814)	-417	NM_011814	23879	Mm.41930	NM_011814	ENSMUSG00000018765	Fxr2	Fxr2h	fragile X mental retardation, autosomal homolog 2	protein-coding
common_peak2-19712-14-7-0.899216160357645-0.947446088118041	chr1	64756810	64757219	+	0	NA	intron (NM_001097644, intron 4 of 9)	intron (NM_001097644, intron 4 of 9)	19095	NM_001097644	227210	Mm.39706	NM_001097644	ENSMUSG00000070871	Ccnyl1	9630037P07Rik|AW554339	cyclin Y-like 1	protein-coding
common_peak2-25435-15-9-0.690236655668294-0.732381977911291	chr19	3907227	3907749	+	0	NA	promoter-TSS (NM_001136091)	promoter-TSS (NM_001136091)	-355	NM_001136091	27060	Mm.271689	NM_016921	ENSMUSG00000001750	Tcirg1	ATP6N1C|ATP6a3|Atp6i|OC-116|OPTB1|Stv1|TIRC7|Vph1|oc	T cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3	protein-coding
common_peak2-20173-13-27--1.02888289141984-1.21173582416604	chr1	171287384	171287986	+	0	NA	Intergenic	Intergenic	173910	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
common_peak1-9241-9-7-0.18961340640422-1.05908390183068	chr11	86573855	86574372	+	0	NA	Intergenic	PB1D7|SINE|Alu	-3119	NM_001003908	67300	Mm.254588	NM_001003908	ENSMUSG00000047126	Cltc	3110065L21Rik|CHC|R74732	clathrin, heavy polypeptide (Hc)	protein-coding
common_peak2-21747-21-15-0.569489265266236-0.756118839439552	chr11	115877003	115877713	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-3325	NM_016905	14635	Mm.2820	NM_016905	ENSMUSG00000020766	Galk1	AA409894|GALK|Gk|Glk|Glk1	galactokinase 1	protein-coding
common_peak1-7760-12-7-0.648775985087639-0.697979855752659	chr1	91816683	91817209	+	0	NA	Intergenic	Intergenic	10805	NM_010262	14472	Mm.204730	NM_010262		Gbx2	D130058E05Rik|Gbx-2|MMoxA|Stra7	gastrulation brain homeobox 2	protein-coding
unique_peak1-4999-10-1-2.35641534500877-2.57096726280955	chr4	117832046	117832568	+	0	NA	intron (NM_001161823, intron 11 of 21)	ORR1C2|LTR|MaLR	20341	NM_172382	230674	Mm.234234	NM_172382	ENSMUSG00000033326	Kdm4a	D4Ertd222e|JHDM3A|Jmjd2|Jmjd2a|mKIAA0677	lysine (K)-specific demethylase 4A	protein-coding
common_peak2-28351-33-37-0.0834100490819436-0.326417267106726	chr4	135873159	135874388	+	0	NA	intron (NM_001277123, intron 3 of 9)	intron (NM_001277123, intron 3 of 9)	6916	NM_001277123	74326	Mm.31051	NM_028871	ENSMUSG00000066037	Hnrnpr	2610003J05Rik|2610528B01Rik|Hnrpr	heterogeneous nuclear ribonucleoprotein R	protein-coding
common_peak1-7837-59-74-0.0965453103766976-0.35180453854947	chr1	128416436	128417502	+	0	NA	intron (NM_001081756, intron 3 of 16)	intron (NM_001081756, intron 3 of 16)	-27465	NM_172484	210356	Mm.377234	NM_172484	ENSMUSG00000049690	Nckap5	8430408F21|D130011D22Rik|E030049G20Rik|Erih1|Erih2|Gm1548|Nap5	NCK-associated protein 5	protein-coding
common_peak1-17843-74-100-0.0576750942268127-0.327513992693979	chr7	111081886	111083246	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-3330	NM_147119	259123	Mm.377861	NM_147119	ENSMUSG00000073938	Olfr632	MOR2-1	olfactory receptor 632	protein-coding
common_peak2-21375-12-17--0.521149016354673-0.417187467413082	chr11	78512223	78512846	+	0	NA	Intergenic	B1_Mur3|SINE|Alu	-1607	NM_008702	18099	Mm.9001	NM_008702	ENSMUSG00000017376	Nlk	AI194375	nemo like kinase	protein-coding
unique_peak1-4793-6-6--0.241956811677302-0.947717972411649	chr3	132791616	132792144	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	36963	NM_027927	71793	Mm.246726	NM_027927	ENSMUSG00000028016	Ints12	1110020M19Rik|2810027J24Rik|4930529N21Rik|A230056J18Rik|AI666778|Phf22	integrator complex subunit 12	protein-coding
common_peak2-26102-40-62--0.318304240748819-0.533919121953929	chr2	3712655	3714246	+	0	NA	Intergenic	Lx8|LINE|L1	82720	NM_025626	66540	Mm.277864	NM_025626	ENSMUSG00000026655	Fam107b	3110001A13Rik|AA589595|AA959793|AI132312	family with sequence similarity 107, member B	protein-coding
common_peak2-21172-40-36-0.449522317122148-0.865433649227636	chr11	59636072	59637211	+	0	NA	intron (NM_011991, intron 8 of 11)	intron (NM_011991, intron 8 of 11)	13059	NR_045686	100504104	Mm.391737	NR_045686	ENSMUSG00000087249	Gm16062	ENSMUSG00000072890|OTTMUSG00000029633	predicted gene 16062	ncRNA
unique_peak1-5011-8-1-2.00522241794757-2.05605744720049	chr4	123754455	123754987	+	0	NA	Intergenic	Intergenic	160045	NM_017475	54170	Mm.220922	NM_017475	ENSMUSG00000028646	Rragc	AU041672|Gtr2|RAGC|TIB929|YGR163W	Ras-related GTP binding C	protein-coding
unique_peak2-33437-0-6--3.64748585253182-1.56314192529759	chr11	61175976	61176340	+	0	NA	intron (NM_026183, intron 10 of 16)	intron (NM_026183, intron 10 of 16)	15419	NM_026183	67473	Mm.100741	NM_026183	ENSMUSG00000010122	Slc47a1	1300013J15Rik|AI036982|MATE1|mMATE1	solute carrier family 47, member 1	protein-coding
unique_peak2-35326-5-17--1.87430533744817-1.80287260729378	chr17	21535408	21536168	+	0	NA	3' UTR (NM_172486, exon 4 of 4)	3' UTR (NM_172486, exon 4 of 4)	15076	NM_172486	210503	Mm.33443	NM_172486	ENSMUSG00000062743	Zfp677	A830058L05Rik|Tce8	zinc finger protein 677	protein-coding
common_peak1-13409-124-138-0.490939246665173-2.43015193322688	chr19	47918214	47920698	+	0	NA	Intergenic	RLTR45-int|LTR|ERVK	-7605	NM_027559	100048534	Mm.29457	NM_027559	ENSMUSG00000044948	Cfap43	4632415N18Rik|4930428C11Rik|4930463G05Rik|AI429486|D19Ertd652e|Wdr96	cilia and flagella associated protein 43	protein-coding
common_peak2-19949-6-10--0.894033508256995-1.21398586181642	chr1	131527043	131527512	+	0	NA	intron (NM_172485, intron 5 of 27)	intron (NM_172485, intron 5 of 27)	357396	NM_172485	210417	Mm.380518	NM_172485	ENSMUSG00000042581	Thsd7b	1700074E13Rik|B930082A18|D130067I03Rik	thrombospondin, type I, domain containing 7B	protein-coding
unique_peak1-113-8-7-0.00522241794757061-1.00793137938329	chr1	59163178	59163686	+	0	NA	exon (NM_001033449, exon 11 of 13)	exon (NM_001033449, exon 11 of 13)	-11688	NM_175200	73463	Mm.252811	NM_175200	ENSMUSG00000072295	Als2cr11	1700052H20Rik|4930408G06Rik	amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 11 (human)	protein-coding
unique_peak1-5950-7-1-1.79909083029819-1.80617997398389	chr6	91221840	91222279	+	0	NA	3' UTR (NM_007992, exon 18 of 18)	3' UTR (NM_007992, exon 18 of 18)	59301	NM_007992	14115	Mm.249146	NM_007992	ENSMUSG00000064080	Fbln2	5730577E14Rik|FIBL-2	fibulin 2	protein-coding
common_peak2-31584-12-7-0.648775985087639-0.697979855752659	chr8	120488985	120489401	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-163364	NM_026758	68533	Mm.181836	NM_026758	ENSMUSG00000031843	Mphosph6	1110001M01Rik|AA536809|C86426	M phase phosphoprotein 6	protein-coding
common_peak2-25944-41-43-0.241717086211363-0.486454540233427	chr19	47089890	47090650	+	0	NA	promoter-TSS (NM_001164363)	promoter-TSS (NM_001164363)	-591	NM_001164363	76952	Mm.40965	NM_029810	ENSMUSG00000025041	Nt5c2	2010002I23Rik|CnII|ENSMUSG00000025039|Gm9751|Gmp|Nt5b|Pnt5|cN-II	5'-nucleotidase, cytosolic II	protein-coding
common_peak2-23783-35-71--0.738554742979808-1.80978279797655	chr15	99392936	99394042	+	0	NA	Intergenic	Intergenic	-15998	NM_009699	11827	Mm.20206	NM_009699	ENSMUSG00000023013	Aqp2	AQP-CD|WCH-CD|cph|jpk	aquaporin 2	protein-coding
unique_peak2-34875-1-9--2.94898510510411-2.31132995230379	chr15	78815670	78816062	+	0	NA	intron (NM_001024716, intron 1 of 13)	intron (NM_001024716, intron 1 of 13)	2380	NM_001024716	110253	Mm.123714	NM_138579	ENSMUSG00000033088	Triobp	AI428493|EST478828|Tara|mKIAA1662	TRIO and F-actin binding protein	protein-coding
unique_peak1-5456-45-7-2.86035802534487-10.2231214387873	chr5	122135813	122137339	+	0	NA	3' UTR (NM_028227, exon 12 of 12)	3' UTR (NM_028227, exon 12 of 12)	-25042	NM_009125	20239	Mm.260900	NM_009125	ENSMUSG00000042605	Atxn2	9630045M23Rik|ATX2|AW544490|Sca2	ataxin 2	protein-coding
common_peak2-28550-120-251--0.424318303008167-2.27105345917276	chr5	3927435	3929094	+	0	NA	promoter-TSS (NM_194462)	promoter-TSS (NM_194462)	78	NM_194462	100986	Mm.46044	NM_194462	ENSMUSG00000040407	Akap9	5730481H23Rik|AKAP-9|AKAP450|AW545847|C79026|G1-448-15|PRKA9|mKIAA0803|mei2-5|repro12	A kinase (PRKA) anchor protein (yotiao) 9	protein-coding
unique_peak2-37194-8-10--0.454209200689727-1.078512453669	chr4	58553269	58553757	+	0	NA	intron (NM_010336, intron 1 of 3)	intron (NM_010336, intron 1 of 3)	12652	NM_172989	14745	Mm.4772	NM_010336	ENSMUSG00000038668	Lpar1	AI326300|Edg2|Gpcr26|Kdt2|lpA1|vzg-1	lysophosphatidic acid receptor 1	protein-coding
common_peak2-31700-18-17-0.142994149786039-0.353907621462753	chr9	50134589	50135500	+	0	NA	Intergenic	ID_B1|SINE|B4	-167586	NM_029639	76509	Mm.29959	NM_029639	ENSMUSG00000032068	Plet1	0610037B23Rik|1600029D21Rik|AA407923|AU043048	placenta expressed transcript 1	protein-coding
common_peak2-23532-56-108--0.532588499337683-1.60033012847202	chr15	77840400	77842157	+	0	NA	intron (NM_007583, intron 2 of 3)	ORR1B1|LTR|MaLR	-40024	NM_018749	55944	Mm.3955	NM_018749	ENSMUSG00000016554	Eif3d	66/67kDa|AA407891|Eif3s7|eIF3p66	eukaryotic translation initiation factor 3, subunit D	protein-coding
common_peak2-23168-12-23--0.936186515633517-0.912223620338476	chr14	122982793	122983784	+	0	NA	intron (NM_144844, intron 5 of 23)	(TTTC)n|Simple_repeat|Simple_repeat	49738	NM_144844	110821	Mm.23876	NM_144844	ENSMUSG00000041650	Pcca	C79630	propionyl-Coenzyme A carboxylase, alpha polypeptide	protein-coding
unique_peak1-3003-11-5-0.923731083530457-1.477227296591	chr17	84069752	84070366	+	0	NA	Intergenic	B1F|SINE|Alu	-35444	NM_001171054	116871	Mm.277668	NM_054082	ENSMUSG00000055817	Mta3	1110002J22Rik|mKIAA1266	metastasis associated 3	protein-coding
unique_peak2-34784-1-6--2.43441193227435-1.56314192529759	chr15	61991867	61992182	+	0	NA	intron (NR_003368, intron 4 of 8)	intron (NR_003368, intron 4 of 8)	58982	NR_003523	67552	Mm.484027	NM_026230		H2afy3	4933432H23Rik	H2A histone family, member Y3	pseudo
common_peak2-31844-13-8-0.608547029195456-0.660903317613904	chr9	45850495	45851048	+	0	NA	intron (NM_027498, intron 1 of 24)	intron (NM_027498, intron 1 of 24)	29868	NM_027498	70661	Mm.219459	NM_027498	ENSMUSG00000034135	Sik3	5730525O22Rik|9030204A07Rik|AI447252|AI846254|AI849445|Qsk|SIK-3|mKIAA0999	SIK family kinase 3	protein-coding
common_peak1-16843-66-107--0.236403837737627-0.546781255373177	chr6	52713443	52714465	+	0	NA	intron (NM_025816, intron 16 of 17)	intron (NM_025816, intron 16 of 17)	50231	NM_025816	52440	Mm.389757	NM_025816	ENSMUSG00000004535	Tax1bp1	1200003J11Rik|1700069J21Rik|AA930106|D6Ertd404e|D6Ertd772e|T6bp|TXBP151	Tax1 (human T cell leukemia virus type I) binding protein 1	protein-coding
common_peak1-8265-28-52--0.674961334741736-1.23110482636734	chr10	22731381	22732238	+	0	NA	Intergenic	Intergenic	-191875	NM_011545	21412	Mm.16497	NM_011545	ENSMUSG00000045680	Tcf21	Pod-1|Pod1|bHLHa23|capsulin|epc|epicardin	transcription factor 21	protein-coding
common_peak1-15646-12-14--0.25811461052088-0.309074325783021	chr4	135272171	135272801	+	0	NA	Intergenic	Intergenic	-11588	NM_178257	230828	Mm.261647	NM_178257		Il22ra1	9130219A07Rik|ENSMUSG00000073746|IL-22R|Il22r	interleukin 22 receptor, alpha 1	protein-coding
common_peak1-9190-45-60--0.070379312218015-0.308391271559909	chr11	79703735	79704633	+	0	NA	Intergenic	RMER10A|LTR|ERVL	71705	NM_144826	216987	Mm.274961	NM_144826	ENSMUSG00000035575	Utp6	4732497O03Rik|HCA66	UTP6, small subunit (SSU) processome component, homolog (yeast)	protein-coding
unique_peak1-4222-20-2-2.90311228387004-4.53603905993749	chr2	122266259	122267242	+	0	NA	intron (NM_172980, intron 2 of 18)	MT2A|LTR|ERVL	14537	NM_172980	269346	Mm.29510	NM_172980	ENSMUSG00000027219	Slc28a2	2010208B10Rik|B430217P18|BB152493|Cnt2	solute carrier family 28 (sodium-coupled nucleoside transporter), member 2	protein-coding
unique_peak2-39837-1-6--2.43441193227435-1.56314192529759	chrX	51814902	51815249	+	0	NA	Intergenic	RMER17D|LTR|ERVK	-19310	NM_001166646	100040867	Mm.481748	NM_001166646	ENSMUSG00000096468	Gm16405	EG625802	predicted gene 16405	protein-coding
common_peak1-7482-28-58--0.829683929540379-1.81177654248742	chr1	4857504	4858421	+	0	NA	intron (NM_011541, intron 2 of 9)	RMER6B|LTR|ERVK	9553	NM_001159751	21399	Mm.207263	NM_011541	ENSMUSG00000033813	Tcea1	S-II	transcription elongation factor A (SII) 1	protein-coding
unique_peak1-6486-8-4-0.683294323060208-1.21878474469819	chr7	112444386	112444903	+	0	NA	Intergenic	L1Md_F2|LINE|L1	8035	NM_001011533	259161	Mm.377867	NM_001011533	ENSMUSG00000073909	Olfr688	MOR40-16|MOR40-5|Olfr688-ps1	olfactory receptor 688	protein-coding
unique_peak2-34474-3-4--0.73591118484664-0.864171920961574	chr14	31902310	31902604	+	0	NA	intron (NM_001081251, intron 24 of 32)	B2_Mm2|SINE|B2	39659	NR_024069	66487	Mm.379116	NR_024069	ENSMUSG00000058351	Smim4	2010107H07Rik|Snhg8	small itegral membrane protein 4	ncRNA
unique_peak2-32556-5-8--0.874305337448166-1.10484139239135	chr1	75024390	75024841	+	0	NA	intron (NM_029342, intron 3 of 5)	intron (NM_029342, intron 3 of 5)	-26390	NM_010544	16147	Mm.439736	NM_010544	ENSMUSG00000006538	Ihh	-	Indian hedgehog	protein-coding
unique_peak1-5053-6-5--0.0195643903408542-0.947717972411649	chr4	135516480	135516938	+	0	NA	exon (NM_008254, exon 8 of 9)	exon (NM_008254, exon 8 of 9)	-4371	NM_178389	74246	Mm.247946	NM_178389	ENSMUSG00000028671	Gale	2310002A12Rik|AI323962	galactose-4-epimerase, UDP	protein-coding
common_peak1-11325-12-8-0.478850983645327-0.562038191119709	chr15	85662705	85663176	+	0	NA	intron (NM_001033337, intron 1 of 13)	intron (NM_001033337, intron 1 of 13)	206	NM_001033337	239570	Mm.151748	NM_001033337	ENSMUSG00000035944	Ttc38	9030019H09	tetratricopeptide repeat domain 38	protein-coding
unique_peak2-35373-7-11--0.785871670422967-1.21681515183528	chr17	28313511	28314137	+	0	NA	promoter-TSS (NM_172617)	promoter-TSS (NM_172617)	-539	NM_172617	224656	Mm.267359	NM_172617	ENSMUSG00000024220	Zfp523	2810027J07|BC025615|Znf76	zinc finger protein 523	protein-coding
common_peak1-13210-10-6-0.549060422951165-1.21398586181642	chr19	24042666	24043173	+	0	NA	Intergenic	Intergenic	62590	NM_001114174	381217	Mm.426078	NM_001114174	ENSMUSG00000071604	Fam189a2	AI414343|AI666772|Gm967	family with sequence similarity 189, member A2	protein-coding
common_peak2-29006-20-56--1.34481522957355-3.62981913803281	chr5	110107454	110108320	+	0	NA	Intergenic	MurSatRep1|Unknown|Unknown	-119875	NM_001164735	57914	Mm.35771	NM_016715	ENSMUSG00000033467	Crlf2	CRLM2|Ly114|Tpte2|Tslpr	cytokine receptor-like factor 2	protein-coding
common_peak2-27353-12-12--0.0516637330534535-0.309718203022949	chr3	79287388	79287902	+	0	NA	intron (NM_001162999, intron 12 of 16)	Lx8|LINE|L1	83956	NM_001162999	329679	Mm.244005	NM_001162999	ENSMUSG00000061175	Fnip2	D630023B12Rik|mKIAA1450	folliculin interacting protein 2	protein-coding
unique_peak1-5524-32-15-1.27909201921966-2.70027529094734	chr5	139300171	139301673	+	0	NA	Intergenic	Intergenic	4888	NM_001195128	384244	Mm.485002	NM_001195128	ENSMUSG00000094504	Gm5294	EG384244	predicted gene 5294	protein-coding
common_peak1-12827-32-67--0.808370822030679-1.92631927296918	chr18	69346024	69346919	+	0	NA	Intergenic	Intergenic	-157675	NM_013685	21413	Mm.4269	NM_013685	ENSMUSG00000053477	Tcf4	5730422P05Rik|ASP-I2|E2-2|E2.2|ITF-2|ITF-2b|ITF2|ME2|MITF-2A|MITF-2B|SEF-2|SEF2|SEF2-1|TFE|Tcf-4|bHLHb19	transcription factor 4	protein-coding
common_peak2-26768-10-14--0.550475250599749-0.446472590016315	chr2	143062490	143062995	+	0	NA	Intergenic	ORR1E|LTR|MaLR	158514	NM_020595	57329	Mm.157751	NM_020595	ENSMUSG00000027416	Otor	CDRAP|Fdp|MIA|MIAL	otoraplin	protein-coding
common_peak1-18484-12-21--0.810655633549659-0.713635438203849	chr8	84980302	84980980	+	0	NA	Intergenic	Intergenic	-54156	NM_008357	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak1-13911-22-18-0.399356591643819-0.549581527953406	chr2	80638293	80639176	+	0	NA	Intergenic	MLT2B2|LTR|ERVL	159313	NM_001190179	69482	Mm.29200	NM_027091		Nup35	2310006I24Rik|35kDa|5330402E05Rik|MP44|NO44	nucleoporin 35	protein-coding
common_peak1-16666-51-67--0.012539015647766-0.30102999566397	chr6	140623255	140624960	+	0	NA	intron (NM_009637, intron 8 of 8)	B3|SINE|B2	51288	NM_009637	11569	Mm.86453	NM_009637	ENSMUSG00000030232	Aebp2	AU023766|B230313N05Rik	AE binding protein 2	protein-coding
unique_peak1-4677-12-5-1.06381348436648-1.78669045979184	chr3	94914047	94914723	+	0	NA	promoter-TSS (NM_009336)	promoter-TSS (NM_009336)	-579	NM_009336	21427	Mm.133919	NM_009336	ENSMUSG00000008958	Vps72	Tcfl1|YL-1	vacuolar protein sorting 72 (yeast)	protein-coding
unique_peak1-4025-16-4-1.7963355473807-2.18192634393779	chr2	46441704	46442420	+	0	NA	Intergenic	MTD|LTR|MaLR	889937	NR_040497	69405	Mm.396184	NR_040497	ENSMUSG00000086202	1700019E08Rik	-	RIKEN cDNA 1700019E08 gene	ncRNA
unique_peak1-3341-11-1-2.50869358425161-2.83420869758413	chr18	88926908	88927427	+	0	NA	Intergenic	Intergenic	136432	NM_018821	54607	Mm.91920	NM_018821	ENSMUSG00000056153	Socs6	1500012M23Rik|5830401B18Rik|AI447482|Cis4|Cish4|HSPC060|SOCS-4|SOCS-6|SSI4|STAI4|STATI4|Socs4	suppressor of cytokine signaling 6	protein-coding
common_peak2-31340-13-22--0.745089925419244-0.690311289528838	chr8	83997410	83998226	+	0	NA	intron (NM_001297596, intron 2 of 24)	intron (NM_001297596, intron 2 of 24)	131357	NM_001297593	234515	Mm.324468	NM_001024617	ENSMUSG00000037940	Inpp4b	E130107I17Rik	inositol polyphosphate-4-phosphatase, type II	protein-coding
common_peak1-17688-37-32-0.481598952127365-0.849650211186447	chr7	67437144	67438599	+	0	NA	Intergenic	Intergenic	-152766	NM_001082962	20646	Mm.274995	NM_013670	ENSMUSG00000000948	Snrpn	2410045I01Rik|HCERN3|Peg4|Pwcr1|SMN	small nuclear ribonucleoprotein N	protein-coding
common_peak1-17451-16-12-0.417823924126969-0.489164546851866	chr7	18948203	18948922	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-8206	NM_011963	26438	Mm.89991	NM_011963	ENSMUSG00000003505	Psg18	Cea-3|Cea3|mmCGM6	pregnancy specific glycoprotein 18	protein-coding
unique_peak1-301-7-1-1.79909083029819-1.80617997398389	chr1	127230800	127231240	+	0	NA	Intergenic	MT2A|LTR|ERVL	101284	NM_023735	74117	Mm.183102	NM_023735	ENSMUSG00000026341	Actr3	1200003A09Rik|Arp3	ARP3 actin-related protein 3	protein-coding
unique_peak2-37095-1-4--1.94898510510411-1.10720996964787	chr3	153123689	153123925	+	0	NA	intron (NM_011372, intron 2 of 4)	intron (NM_011372, intron 2 of 4)	264290	NM_011372	20447	Mm.440929	NM_011372		St6galnac3	Siat7c	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	protein-coding
unique_peak1-4578-11-5-0.923731083530457-1.477227296591	chr3	57307597	57308192	+	0	NA	intron (NM_133784, intron 2 of 6)	intron (NM_133784, intron 2 of 6)	71904	NM_133784	97064	Mm.405029	NM_133784	ENSMUSG00000027803	Wwtr1	2310058J06Rik|2610021I22Rik|C78399|Taz	WW domain containing transcription regulator 1	protein-coding
unique_peak2-33786-14-14--0.00767443525087419-0.308519316180257	chr11	119818620	119819458	+	0	NA	intron (NM_130862, intron 2 of 13)	intron (NM_130862, intron 2 of 13)	14633	NM_130862	108100	Mm.197534	NM_130862	ENSMUSG00000025372	Baiap2	IRSp53|R75030	brain-specific angiogenesis inhibitor 1-associated protein 2	protein-coding
common_peak1-13028-13-7-0.778472030637769-0.817533494790411	chr19	5459999	5460720	+	0	NA	promoter-TSS (NM_021438)	promoter-TSS (NM_021438)	-248	NM_001253832	58249	Mm.329656	NM_021438	ENSMUSG00000024911	Fibp	2010004G08Rik|2010005N21Rik|3010027N18Rik	fibroblast growth factor (acidic) intracellular binding protein	protein-coding
common_peak1-19292-25-30--0.0923464050417691-0.304710633611958	chr9	120492182	120493268	+	0	NA	Intergenic	Intergenic	6277	NR_073359	76100	Mm.48212	NR_073359	ENSMUSG00000052658	5830454E08Rik	-	RIKEN cDNA 5830454E08 gene	ncRNA
common_peak2-30492-12-9-0.326847890200276-0.459837087125828	chr7	60244128	60244656	+	0	NA	Intergenic	Intergenic	902867	NR_105746	102466619		NR_105746	miRBase:MI0021585	Mir6238	mmu-mir-6238	microRNA mir-6238	ncRNA
common_peak2-28354-9-8-0.0196884049619079-1.03275496310833	chr4	136122862	136123319	+	0	NA	intron (NM_133872, intron 8 of 18)	intron (NM_133872, intron 8 of 18)	35548	NM_133872	99982	Mm.28540	NM_133872	ENSMUSG00000036940	Kdm1a	1810043O07Rik|AA408884|Aof2|D4Ertd478e|Kdm1|Lsd1|mKIAA0601	lysine (K)-specific demethylase 1A	protein-coding
unique_peak1-2654-12-0-3.64877598508764-4.21441993929574	chr16	50736591	50737220	+	0	NA	Intergenic	Intergenic	-4019	NR_028300	68190	Mm.139089	NR_028300		5330426P16Rik	-	RIKEN cDNA 5330426P16 gene	ncRNA
common_peak1-14675-18-47--1.2720433494928-2.7322271604537	chr3	61364609	61365476	+	0	NA	Intergenic	L1_Mur3|LINE|L1	196613	NM_028712	74012	Mm.422674	NM_028712	ENSMUSG00000036894	Rap2b	4021402C18Rik|AA408554	RAP2B, member of RAS oncogene family	protein-coding
common_peak2-26060-8-7-0.00522241794757061-1.00793137938329	chr2	35684222	35684538	+	0	NA	intron (NM_029774, intron 6 of 9)	ORR1A4|LTR|MaLR	9670	NR_040618	77665	Mm.400558	NR_040618	ENSMUSG00000086449	9030204H09Rik	-	RIKEN cDNA 9030204H09 gene	ncRNA
common_peak1-17598-10-19--0.965512749878593-0.917676348953458	chr7	44696630	44697256	+	0	NA	Intergenic	Intergenic	1822961	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak2-36149-6-7--0.434601889619698-0.97990265578305	chr2	21237291	21237672	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	-51713	NM_001004761	241263	Mm.166647	NM_175706	ENSMUSG00000045967	Gpr158	5330427M13Rik|mKIAA1136	G protein-coupled receptor 158	protein-coding
common_peak1-14568-33-19-1.00940946763817-1.9602491241746	chr3	37640179	37641482	+	0	NA	Intergenic	Intergenic	-17548	NM_198657	381438	Mm.490549	NM_198657	ENSMUSG00000058174	Gm5148	EG381438	predicted gene 5148	protein-coding
common_peak2-19819-12-13--0.158578936969966-0.301029995663979	chr1	88533694	88534240	+	0	NA	Intergenic	Intergenic	33181	NM_010933	18159	Mm.12802	NM_010933	ENSMUSG00000026241	Nppc	CNP|lbab	natriuretic peptide type C	protein-coding
common_peak1-11788-12-21--0.810655633549659-0.713635438203849	chr16	49855674	49856249	+	0	NA	intron (NM_010581, intron 1 of 9)	CpG	194	NM_010581	16423	Mm.31752	NM_010581	ENSMUSG00000055447	Cd47	9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp	CD47 antigen (Rh-related antigen, integrin-associated signal transducer)	protein-coding
common_peak1-8279-12-9-0.326847890200276-0.459837087125828	chr10	26011102	26011734	+	0	NA	intron (NM_172787, intron 18 of 21)	intron (NM_172787, intron 18 of 21)	61905	NM_001115154	268288	Mm.213322	NM_001013766	ENSMUSG00000051354	Samd3	Gm623	sterile alpha motif domain containing 3	protein-coding
unique_peak2-34602-6-7--0.434601889619698-0.97990265578305	chr14	70635621	70636114	+	0	NA	intron (NM_008915, intron 9 of 13)	RSINE1|SINE|B4	-28389	NM_011366	20410	Mm.5068	NM_011366	ENSMUSG00000022091	Sorbs3	SCAM-1|SH3P3|Sh3d4|vinexin-g	sorbin and SH3 domain containing 3	protein-coding
unique_peak2-36375-5-8--0.874305337448166-1.10484139239135	chr2	117672408	117673020	+	0	NA	intron (NR_040631, intron 2 of 5)	L1Md_F3|LINE|L1	25050	NR_040631	73938	Mm.399107	NR_040631	ENSMUSG00000086221	4930412B13Rik	-	RIKEN cDNA 4930412B13 gene	ncRNA
unique_peak2-37846-18-45--1.21064280482866-2.44377456520723	chr5	135624783	135626280	+	0	NA	promoter-TSS (NM_013763)	promoter-TSS (NM_013763)	-50	NM_013763	27368	Mm.36746	NM_013763		Tbl2	C76179|WS-bTRP	transducin (beta)-like 2	protein-coding
common_peak2-26073-36-39-0.157392991280392-0.394172396164276	chr2	94010203	94011410	+	0	NA	Intergenic	B3|SINE|B2	-12740	NM_019657	56348	Mm.22505	NM_019657	ENSMUSG00000027195	Hsd17b12	2610510O05Rik|AI172963|KIK-I|Kik1	hydroxysteroid (17-beta) dehydrogenase 12	protein-coding
unique_peak1-6725-12-0-3.64877598508764-4.21441993929574	chr8	42186960	42187463	+	0	NA	intron (NM_001005863, intron 1 of 13)	intron (NM_001005863, intron 1 of 13)	12810	NM_001286413	102103	Mm.149438	NM_001005863	ENSMUSG00000045636	Mtus1	AI481402|ATBP135|Atip1|B430010I23Rik|B430305I03Rik|C85752|Cctsg1-440|MD44|MTSG1|mKIAA1288	mitochondrial tumor suppressor 1	protein-coding
common_peak2-20058-36-54--0.302038627356906-0.47894145157142	chr1	151499875	151501025	+	0	NA	Intergenic	L1MC1|LINE|L1	307964	NM_008869	18783	Mm.4186	NM_008869	ENSMUSG00000056220	Pla2g4a	Pla2g4|cPLA2|cPLA2alpha	phospholipase A2, group IVA (cytosolic, calcium-dependent)	protein-coding
unique_peak1-3434-28-11-1.46799661910031-2.80071159219767	chr19	6548000	6549182	+	0	NA	Intergenic	Intergenic	-5521	NM_009203	20521	Mm.391146	NM_009203	ENSMUSG00000061742	Slc22a12	AI987855|OAT4L|Rst|Slc22al2|URAT1	solute carrier family 22 (organic anion/cation transporter), member 12	protein-coding
common_peak2-20467-13-5-1.19350952991661-1.95509489018123	chr10	43694762	43695055	+	0	NA	exon (NM_172393, exon 9 of 20)	exon (NM_172393, exon 9 of 20)	29744	NM_172393	11630	Mm.292082	NM_172393	ENSMUSG00000019866	Aim1	AI462491|AI463325	absent in melanoma 1	protein-coding
unique_peak1-2811-10-7-0.356415345008769-1.12966497611638	chr17	24251430	24251969	+	0	NA	intron (NM_001286662, intron 1 of 13)	intron (NM_001286662, intron 1 of 13)	26862	NM_011062	18607	Mm.10504	NM_011062	ENSMUSG00000024122	Pdpk1	Pdk1	3-phosphoinositide dependent protein kinase 1	protein-coding
common_peak1-8647-14-10-0.439784541720347-0.519648556297791	chr10	127188243	127188879	+	0	NA	intron (NM_007412, intron 1 of 1)	intron (NM_007412, intron 1 of 1)	293	NM_007412	11536	Mm.2857	NM_007412		Gpr182	AM-R|Admr|G10-D|Gpcr17|Gpcr22|MB10|NOW	G protein-coupled receptor 182	protein-coding
common_peak2-28205-44-41-0.429575411789775-0.87081905171081	chr4	117155601	117156525	+	0	NA	intron (NM_025739, intron 2 of 14)	intron (NM_025739, intron 2 of 14)	13457	NM_025739	66743	Mm.318331	NM_025739	ENSMUSG00000028677	Rnf220	4732477A13|4931406I20Rik|5730503K05Rik|AV302541	ring finger protein 220	protein-coding
unique_peak2-38826-11-16--0.578769256998726-0.503257505534083	chr7	141193009	141193972	+	0	NA	intron (NM_007400, intron 4 of 22)	intron (NM_007400, intron 4 of 22)	-219022	NM_001286031	101437	Mm.199223	NM_133941	ENSMUSG00000030986	Dhx32	3110079L04Rik|4732469F02Rik|AA408140|Ddx32	DEAH (Asp-Glu-Ala-His) box polypeptide 32	protein-coding
unique_peak2-32807-5-9--1.02630843089322-1.21398586181642	chr1	184035371	184036013	+	0	NA	Intergenic	Intergenic	-19176	NM_012058	27058	Mm.303071	NM_012058	ENSMUSG00000026511	Srp9	9kDa	signal recognition particle 9	protein-coding
common_peak2-22677-7-8--0.370834171144123-1.00793137938329	chr13	98015026	98015399	+	0	NA	exon (NM_007930, exon 2 of 3)	exon (NM_007930, exon 2 of 3)	4152	NM_007930	13803	Mm.241073	NM_007930	ENSMUSG00000041773	Enc1	Nrpb|PIG10	ectodermal-neural cortex 1	protein-coding
common_peak2-25859-42-25-1.04188960972609-2.66762268841486	chr19	42689839	42690728	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	-2987	NM_053083	67573	Mm.178767	NM_053083	ENSMUSG00000025185	Loxl4	4833426I20Rik|Loxc	lysyl oxidase-like 4	protein-coding
common_peak2-26190-18-43--1.14651246740895-2.16720861012097	chr2	25254748	25256156	+	0	NA	intron (NM_009849, intron 7 of 8)	intron (NM_009849, intron 7 of 8)	-3118	NM_008721	18146	Mm.1131	NM_008721	ENSMUSG00000015094	Npdc1	AI314472|NPDC-1	neural proliferation, differentiation and control 1	protein-coding
common_peak1-11169-10-12--0.344024373132323-0.340565874754526	chr15	76243180	76243700	+	0	NA	intron (NM_175457, intron 11 of 43)	intron (NM_175457, intron 11 of 43)	-20204	NR_105919	102465576		NR_105919		Mir6954	mmu-mir-6954	microRNA mir-6954	ncRNA
common_peak1-9660-392-394-0.988898913976289-28.874517280334	chr12	3109754	3110233	+	0	NA	Intergenic	GSAT_MM|Satellite|Satellite	-125798	NR_015551	74173	Mm.309774	NM_028796	ENSMUSG00000079179	Rab10os	1700012B15Rik|1810036A22Rik	RAB10, member RAS oncogene family, opposite strand	ncRNA
unique_peak2-35169-12-14--0.25811461052088-0.309074325783021	chr16	35490266	35490930	+	0	NA	intron (NM_028295, intron 1 of 16)	CpG	361	NM_028295	72599	Mm.71015	NM_028295	ENSMUSG00000022844	Pdia5	2700053F16Rik|AU015525|Pdir	protein disulfide isomerase associated 5	protein-coding
common_peak1-15540-42-22-1.21876737181017-3.32003866131526	chr4	119126218	119127620	+	0	NA	TTS (NM_001014900)	TTS (NM_001014900)	31630	NM_001014900	332934	Mm.388911	NM_001014900	ENSMUSG00000070806	Zmynd12	AI414736	zinc finger, MYND domain containing 12	protein-coding
common_peak1-9596-9-11--0.395349094316936-0.344532117358383	chr11	119933717	119934301	+	0	NA	intron (NM_009734, intron 10 of 25)	intron (NM_009734, intron 10 of 25)	14132	NM_009734	12009	Mm.2556	NM_009734	ENSMUSG00000039781	Cep131	AZ1|Azi|Azi1	centrosomal protein 131	protein-coding
common_peak2-26407-8-6-0.197867495889966-1.03789460276074	chr2	59420251	59420623	+	0	NA	Intergenic	Intergenic	-29662	NM_198294	66860	Mm.27917	NM_198294	ENSMUSG00000035168	Tanc1	1200003E16Rik|Tanc|mKIAA1728	tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1	protein-coding
common_peak1-17334-25-26-0.106962403181638-0.336580821310522	chr6	147042416	147043460	+	0	NA	intron (NM_001081237, intron 1 of 2)	intron (NM_001081237, intron 1 of 2)	3341	NM_001081237	232539	Mm.491206	NM_001081237	ENSMUSG00000040102	Klhl42	A330079N23Rik|AI450355|C230080I20Rik|Ctb9|Klhdc5|mKIAA1340	kelch-like 42	protein-coding
common_peak1-9799-22-20-0.254966682308644-0.421916810733237	chr12	69168349	69169143	+	0	NA	Intergenic	MERVL_2A-int|LTR|ERVL	-398488	NR_033146	100316870	Mm.379794	NR_033146		Gm17821	-	DDB1 and CUL4 associated factor 5 pseudogene	pseudo
unique_peak1-5931-9-2-1.60465090568306-1.87199725847353	chr6	89453203	89453713	+	0	NA	intron (NM_025351, intron 4 of 7)	intron (NM_025351, intron 4 of 7)	92188	NM_025351	66098	Mm.20313	NM_025351	ENSMUSG00000030086	Chchd6	0710001P09Rik|1700021B03Rik	coiled-coil-helix-coiled-coil-helix domain containing 6	protein-coding
common_peak1-9140-109-165-0.0111202505402765-0.303646243306683	chr11	75654762	75656807	+	0	NA	intron (NM_029548, intron 5 of 7)	intron (NM_029548, intron 5 of 7)	-46225	NM_007873	13447	Mm.5137	NM_007873	ENSMUSG00000020848	Doc2b	-	double C2, beta	protein-coding
unique_peak1-6947-8-5-0.420259917226415-1.10484139239135	chr8	111188750	111189205	+	0	NA	Intergenic	ORR1B1|LTR|MaLR	-49567	NM_007496	11906	Mm.416972	NM_007496	ENSMUSG00000038872	Zfhx3	A230102L03Rik|Atbf1|WBP9|mKIAA4228	zinc finger homeobox 3	protein-coding
unique_peak1-6391-12-0-3.64877598508764-4.21441993929574	chr7	79258301	79258786	+	0	NA	intron (NM_001024703, intron 19 of 22)	intron (NM_001024703, intron 19 of 22)	192938	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding
common_peak2-29937-97-90-0.676206431293585-3.12231751645212	chr6	115807919	115809262	+	0	NA	intron (NM_001167763, intron 1 of 28)	RSINE1|SINE|B4	5044	NM_031177	81896	Mm.333335	NM_031177	ENSMUSG00000030323	Ift122	C86139|Wdr10|sopb	intraflagellar transport 122	protein-coding
unique_peak2-39715-4-5--0.608423014574403-0.909929411522249	chr9	119321107	119321447	+	0	NA	intron (NM_007397, intron 1 of 9)	MurERV4-int|LTR|ERVK	9658	NM_007397	11481	Mm.390239	NM_007397	ENSMUSG00000061393	Acvr2b	ActRIIB	activin receptor IIB	protein-coding
common_peak2-29982-93-163--0.246482141111815-0.752436957991269	chr6	120835416	120837168	+	0	NA	intron (NM_153516, intron 6 of 6)	intron (NM_153516, intron 6 of 6)	30546	NM_007544	12122	Mm.235081	NM_007544	ENSMUSG00000004446	Bid	2700049M22Rik|AI875481|AU022477	BH3 interacting domain death agonist	protein-coding
common_peak1-8082-6-11--1.01956439034085-1.32595962126035	chr1	179546539	179546998	+	0	NA	Intergenic	Intergenic	26306	NR_037994	75589	Mm.86666	NR_037994		2310043L19Rik	-	RIKEN cDNA 2310043L19 gene	ncRNA
common_peak1-9738-21-15-0.569489265266236-0.756118839439552	chr12	45073622	45074480	+	0	NA	Intergenic	L1Md_T|LINE|L1	237004	NM_013760	27362	Mm.27432	NM_013760	ENSMUSG00000014905	Dnajb9	AA408011|AA673251|AA673481|AW556981|ERdj4|Mdg1|mDj7	DnaJ (Hsp40) homolog, subfamily B, member 9	protein-coding
unique_peak1-791-12-1-2.64877598508764-3.36932189928148	chr11	76889625	76890316	+	0	NA	intron (NM_001012309, intron 2 of 6)	intron (NM_001012309, intron 2 of 6)	1704	NR_030756	751519		NR_030756		Mir423	Mirn423|mmu-mir-423	microRNA 423	ncRNA
common_peak1-17526-11-22--1.0148683718054-1.11267835143409	chr7	28377759	28378251	+	0	NA	intron (NM_001110208, intron 1 of 13)	intron (NM_001110208, intron 1 of 13)	1426	NM_001110208	11652	Mm.177194	NM_007434	ENSMUSG00000004056	Akt2	2410016A19Rik|AW554154|PKB|PKBbeta	thymoma viral proto-oncogene 2	protein-coding
common_peak1-15940-35-32-0.386976139104051-0.652627812244279	chr5	29195132	29195912	+	0	NA	Intergenic	Intergenic	-327011	NM_021470	56874	Mm.87352	NM_021470	ENSMUSG00000029130	Rnf32	1700009J01Rik|2700025B22Rik|4930542N22Rik|Lmbr2	ring finger protein 32	protein-coding
common_peak1-12172-36-64--0.5430467268607-1.02389270236921	chr17	29660387	29661631	+	0	NA	Intergenic	MLT1A0|LTR|MaLR	25529	NM_001162901	71138	Mm.158581	NM_001162901	ENSMUSG00000079580	Tmem217	4933413N12Rik|EG622644	transmembrane protein 217	protein-coding
unique_peak1-1070-13-1-2.77847203063777-3.64038867156802	chr11	84361984	84362575	+	0	NA	Intergenic	RSINE1|SINE|B4	23117	NR_038057	78365	Mm.260345	NR_038057	ENSMUSG00000087211	Lhx1os	1500016L03Rik|Lhx1as	LIM homeobox 1, opposite strand	ncRNA
common_peak1-12525-62-151--0.837176054641501-4.36300399840177	chr18	61554418	61556160	+	0	NA	intron (NM_133249, intron 1 of 11)	intron (NM_133249, intron 1 of 11)	4796	NM_133249	170826	Mm.415302	NM_133249	ENSMUSG00000033871	Ppargc1b	4631412G21Rik|Perc	peroxisome proliferative activated receptor, gamma, coactivator 1 beta	protein-coding
unique_peak2-35035-6-16--1.52206473087004-1.32521814697968	chr16	17530545	17531364	+	0	NA	intron (NM_026909, intron 1 of 4)	CpG-5554	191	NM_026909	69009	Mm.10174	NM_026909	ENSMUSG00000022760	Thap7	1810004B07Rik	THAP domain containing 7	protein-coding
common_peak2-19887-9-13--0.617741515653384-0.459837087125828	chr1	97769364	97770014	+	0	NA	Intergenic	Lx9|LINE|L1	148646	NR_040467	73454	Mm.396229	NR_040467		1700063A18Rik	-	RIKEN cDNA 1700063A18 gene	ncRNA
common_peak1-14411-21-21-0.110057646628938-0.344491671143527	chr2	174463531	174464255	+	0	NA	Intergenic	B4A|SINE|B4	-5142	NM_001099328	100043757	Mm.48711	NM_001099328	ENSMUSG00000050600	Zfp831	ENSMUSG00000050600|OTTMUSG00000017459	zinc finger protein 831	protein-coding
common_peak1-8435-10-10--0.103016273628528-0.301029995663987	chr10	78244421	78244896	+	0	NA	intron (NM_009200, intron 1 of 9)	intron (NM_009200, intron 1 of 9)	1417	NM_009200	20513	Mm.6257	NM_009200	ENSMUSG00000005357	Slc1a6	EAAT4	solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6	protein-coding
common_peak1-8350-16-12-0.417823924126969-0.489164546851866	chr10	56485942	56486729	+	0	NA	Intergenic	Intergenic	389229	NM_010288	14609	Mm.378921	NM_010288	ENSMUSG00000050953	Gja1	AU042049|AW546267|Cnx43|Cx43|Cx43alpha1|Gja-1|Npm1|connexin43	gap junction protein, alpha 1	protein-coding
common_peak2-27236-6-7--0.434601889619698-0.97990265578305	chr3	52046704	52047202	+	0	NA	Intergenic	MMERGLN-int|LTR|ERV1	-25306	NM_019739	56458	Mm.29891	NM_019739	ENSMUSG00000044167	Foxo1	AI876417|Afxh|FKHR|Fkhr1|Foxo1a	forkhead box O1	protein-coding
common_peak2-24006-25-35--0.308075096097206-0.423354874519378	chr16	20800501	20801307	+	0	NA	Intergenic	MLT2B2|LTR|ERVL	-66320	NM_009379	21832	Mm.3943	NM_009379	ENSMUSG00000022847	Thpo	Mgdf|Ml|Mpllg|Tpo	thrombopoietin	protein-coding
common_peak2-23143-21-29--0.337401330342283-0.403610417161439	chr14	105802629	105803427	+	0	NA	Intergenic	Intergenic	-23748	NR_045859	71362	Mm.410781	NR_045859		5430440P10Rik	-	RIKEN cDNA 5430440P10 gene	ncRNA
common_peak2-22901-9-4-0.867685311516858-1.36011389749466	chr14	34088352	34088752	+	0	NA	intron (NM_153800, intron 3 of 10)	ORR1A3|LTR|MaLR	58543	NM_153800	239027	Mm.318350	NM_153800	ENSMUSG00000063506	Arhgap22	B230341L19Rik|RHOGAP2|p68RacGAP	Rho GTPase activating protein 22	protein-coding
common_peak2-24611-6-6--0.241956811677302-0.947717972411649	chr17	33779621	33780012	+	0	NA	intron (NM_001002842, intron 4 of 9)	intron (NM_001002842, intron 4 of 9)	4776	NR_028279	378460	Mm.272606	NM_001002842	ENSMUSG00000032739	Pram1	AY665714	PML-RAR alpha-regulated adaptor molecule 1	protein-coding
common_peak1-18012-9-11--0.395349094316936-0.344532117358383	chr7	141268976	141269447	+	0	NA	intron (NM_007400, intron 3 of 22)	B1_Mm|SINE|Alu	147569	NM_007400	11489	Mm.439714	NM_007400	ENSMUSG00000054555	Adam12	Mltna|mKIAA4001	a disintegrin and metallopeptidase domain 12 (meltrin alpha)	protein-coding
unique_peak2-36055-8-6-0.197867495889966-1.03789460276074	chr19	46947777	46948207	+	0	NA	intron (NM_033569, intron 6 of 7)	intron (NM_033569, intron 6 of 7)	88849	NM_029810	76952	Mm.40965	NM_029810	ENSMUSG00000025041	Nt5c2	2010002I23Rik|CnII|ENSMUSG00000025039|Gm9751|Gmp|Nt5b|Pnt5|cN-II	5'-nucleotidase, cytosolic II	protein-coding
common_peak1-7584-15-8-0.842239749113344-0.891319708951327	chr1	53797638	53798397	+	0	NA	Intergenic	Intergenic	-34389	NM_001252070	627872	Mm.184692	NM_001252070	ENSMUSG00000096141	Dnah7a	Dnahc7|Dnahc7a|Gm992	dynein, axonemal, heavy chain 7A	protein-coding
common_peak1-9344-24-14-0.886319307159198-1.33403699391683	chr11	96788927	96789799	+	0	NA	Intergenic	Intergenic	-1275	NM_146026	217138	Mm.342551	NM_146026		Prr15l	Atad4|BC022765|E230006A12Rik	proline rich 15-like	protein-coding
unique_peak1-2195-7-1-1.79909083029819-1.80617997398389	chr15	66506922	66507323	+	0	NA	intron (NM_009375, intron 5 of 47)	intron (NM_009375, intron 5 of 47)	4790	NM_009375	21819	Mm.441333	NM_009375	ENSMUSG00000053469	Tg	Tgn|cog	thyroglobulin	protein-coding
unique_peak2-34856-5-7--0.704380336005853-1.01466476204226	chr15	76870641	76871012	+	0	NA	intron (NM_013593, intron 1 of 3)	intron (NM_013593, intron 1 of 3)	-4679	NM_001163621	71939	Mm.34173	NM_028010	ENSMUSG00000033576	Apol6	2310076O14Rik	apolipoprotein L 6	protein-coding
common_peak2-23248-24-10-1.33377828413042-2.22881803703862	chr15	11399206	11399733	+	0	NA	Intergenic	Intergenic	-70056	NM_033074	110960	Mm.286061	NM_033074	ENSMUSG00000022241	Tars	D15Wsu59e|ThrRS	threonyl-tRNA synthetase	protein-coding
common_peak2-27171-16-30--0.835932668118813-1.0921097739129	chr3	32529200	32530089	+	0	NA	Intergenic	Intergenic	-14187	NM_013531	14696	Mm.139192	NM_013531	ENSMUSG00000027669	Gnb4	6720453A21Rik|G(beta)4	guanine nucleotide binding protein (G protein), beta 4	protein-coding
common_peak2-31223-36-69--0.649961930777212-1.40644682976108	chr8	69774506	69775027	+	0	NA	Intergenic	Lx4B|LINE|L1	-239891	NM_008673	17960	Mm.14125	NM_008673	ENSMUSG00000025588	Nat1	Nat-1	N-acetyl transferase 1	protein-coding
common_peak1-17537-23-15-0.721767504509081-0.949797625454541	chr7	28945628	28946815	+	0	NA	intron (NM_001164655, intron 17 of 19)	intron (NM_001164655, intron 17 of 19)	-8546	NM_007991	14113	Mm.4595	NM_007991	ENSMUSG00000046865	Fbl	AL022665|FIB|FLRN|RNU3IP1	fibrillarin	protein-coding
common_peak1-19395-20-70--1.66167233491349-6.0174712600457	chrX	51018115	51018979	+	0	NA	non-coding (NR_110489, exon 3 of 7)	non-coding (NR_110489, exon 3 of 7)	1208	NR_110489	331578	Mm.483375	NR_110489		AW822252	C230063B02	expressed sequence AW822252	ncRNA
common_peak2-31253-7-8--0.370834171144123-1.00793137938329	chr8	70672613	70673148	+	0	NA	Intergenic	Intergenic	-127547	NM_028182	72281	Mm.40974	NM_028182	ENSMUSG00000053886	Sh2d4a	2210402M20Rik|SH2A	SH2 domain containing 4A	protein-coding
unique_peak2-33365-5-7--0.704380336005853-1.01466476204226	chr11	32532757	32533136	+	0	NA	Intergenic	Intergenic	-9609	NM_001271348	103583	Mm.28017	NM_134015	ENSMUSG00000020271	Fbxw11	2310065A07Rik|AA536858|BTRC2|BTRCP2|Fbxw1b|HOS	F-box and WD-40 domain protein 11	protein-coding
common_peak2-27316-56-75--0.012331688004342-0.301029995664007	chr3	65658671	65659931	+	0	NA	Intergenic	Intergenic	102846	NM_019937	56706	Mm.175612	NM_019937	ENSMUSG00000027829	Ccnl1	2610030E23Rik|AU018493|Ccnl|ania-6a	cyclin L1	protein-coding
common_peak2-26556-21-31--0.430510734733764-0.49501414494053	chr2	100685758	100686542	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-778755	NM_009020	19374	Mm.4988	NM_009020	ENSMUSG00000032864	Rag2	Rag-2	recombination activating gene 2	protein-coding
common_peak1-8732-10-6-0.549060422951165-1.21398586181642	chr11	3288879	3289364	+	0	NA	intron (NM_010718, intron 2 of 15)	ID_B1|SINE|B4	-17726	NM_173053	16886	Mm.124176	NM_010718	ENSMUSG00000020451	Limk2	Limk-2	LIM motif-containing protein kinase 2	protein-coding
unique_peak1-3833-9-0-3.18961340640422-3.01029995663981	chr2	3654914	3655472	+	0	NA	intron (NM_025626, intron 1 of 3)	L1MB3|LINE|L1	24463	NM_025626	66540	Mm.277864	NM_025626	ENSMUSG00000026655	Fam107b	3110001A13Rik|AA589595|AA959793|AI132312	family with sequence similarity 107, member B	protein-coding
common_peak2-19683-24-22-0.269647946710704-0.457753417732779	chr1	58586268	58586884	+	0	NA	exon (NM_172513, exon 12 of 12)	exon (NM_172513, exon 12 of 12)	-24623	NM_008765	18393	Mm.3411	NM_008765	ENSMUSG00000026037	Orc2	AU041563|Orc2l	origin recognition complex, subunit 2	protein-coding
common_peak2-21355-7-7--0.200909169701811-0.97990265578305	chr11	77981929	77982377	+	0	NA	intron (NM_080849, intron 10 of 14)	intron (NM_080849, intron 10 of 14)	-3101	NM_009423	22032	Mm.390418	NM_009423		Traf4	A530032M13Rik|CART1|msp2	TNF receptor associated factor 4	protein-coding
common_peak2-32019-68-119--0.336929816310223-0.886732479180814	chr9	75408903	75410800	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	-2387	NM_016963	50875	Mm.38445	NM_016963	ENSMUSG00000058587	Tmod3	U-Tmod|UTMOD	tropomodulin 3	protein-coding
unique_peak1-3484-9-1-2.18961340640422-2.31132995230379	chr19	10579462	10579946	+	0	NA	intron (NM_025333, intron 3 of 3)	intron (NM_025333, intron 3 of 3)	19995	NM_025333	66072	Mm.180063	NM_025333	ENSMUSG00000024668	Sdhaf2	0610038F07Rik|AA407634|AW049997	succinate dehydrogenase complex assembly factor 2	protein-coding
common_peak1-14870-15-31--0.987835249444344-1.35897270024963	chr3	95667350	95668156	+	0	NA	intron (NM_078479, intron 1 of 1)	intron (NM_078479, intron 1 of 1)	6789	NM_078479	66292	Mm.24108	NM_078479	ENSMUSG00000054312	Mrps21	1810031B19Rik	mitochondrial ribosomal protein S21	protein-coding
common_peak2-19896-40-63--0.341024317248902-0.575830045570394	chr1	106171738	106173284	+	0	NA	Intergenic	L1Md_T|LINE|L1	-492885	NM_011800	23836	Mm.103640	NM_011800	ENSMUSG00000050840	Cdh20	Cdh7	cadherin 20	protein-coding
common_peak2-27698-8-6-0.197867495889966-1.03789460276074	chr3	121685052	121685324	+	0	NA	intron (NM_172525, intron 3 of 22)	intron (NM_172525, intron 3 of 22)	28944	NM_172525	214137	Mm.229287	NM_172525	ENSMUSG00000039831	Arhgap29	6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1	Rho GTPase activating protein 29	protein-coding
common_peak2-31395-41-55--0.106206217208944-0.319297110585551	chr8	88117911	88119383	+	0	NA	Intergenic	URR1A|DNA|MER1_type	-39477	NM_019794	56445	Mm.475573	NM_019794	ENSMUSG00000031701	Dnaja2	1500017M13Rik|2010206B19Rik|DNAJ|DNJ3|Dnaj3|HIRIP4|PRO3015|mDj3	DnaJ (Hsp40) homolog, subfamily A, member 2	protein-coding
unique_peak1-558-8-1-2.00522241794757-2.05605744720049	chr1	193919743	193920289	+	0	NA	Intergenic	Intergenic	-3536	NM_011633	22033	Mm.380491	NM_011633	ENSMUSG00000026637	Traf5	-	TNF receptor-associated factor 5	protein-coding
common_peak2-20589-24-55--1.01414501928989-2.24341076832583	chr10	78574267	78575606	+	0	NA	Intergenic	Lx4B|LINE|L1	-14591	NM_001004362	72128	Mm.297854	NM_001004362	ENSMUSG00000060301	2610008E11Rik	-	RIKEN cDNA 2610008E11 gene	protein-coding
common_peak1-16138-20-23--0.0968877161299631-0.305855887145851	chr5	73255311	73256360	+	0	NA	intron (NM_013689, intron 1 of 17)	intron (NM_013689, intron 1 of 17)	3852	NM_001113461	21682	Mm.319581	NM_013689	ENSMUSG00000029217	Tec	-	tec protein tyrosine kinase	protein-coding
common_peak2-21814-19-25--0.297752391479405-0.376654945067947	chr11	119125589	119126451	+	0	NA	3' UTR (NM_175430, exon 19 of 19)	3' UTR (NM_175430, exon 19 of 19)	-3261	NM_001159324	14387	Mm.4793	NM_008064	ENSMUSG00000025579	Gaa	E430018M07Rik	glucosidase, alpha, acid	protein-coding
common_peak2-22178-19-7-1.40268732666169-1.89173646618542	chr12	102261468	102261883	+	0	NA	intron (NM_026681, intron 2 of 29)	intron (NM_026681, intron 2 of 29)	-1697	NR_035421	100316805		NR_035421		Mir1190	Mirn1190|mmu-mir-1190	microRNA 1190	ncRNA
common_peak1-12016-10-13--0.450939577048835-0.386243247519795	chr17	15376241	15376734	+	0	NA	intron (NR_046164, intron 2 of 4)	intron (NR_046164, intron 2 of 4)	1260	NR_046164	328747	Mm.256835	NR_046164	ENSMUSG00000097624	Gm5091	C330048F19	predicted gene 5091	ncRNA
common_peak1-7702-67-111--0.262943439274609-0.646359817067815	chr1	85793140	85794535	+	0	NA	Intergenic	Intergenic	-526696	NM_001037909	620078	Mm.386456	NM_175219	ENSMUSG00000052477	C130026I21Rik	4930565N07Rik|OTTMUSG00000029174	RIKEN cDNA C130026I21 gene	protein-coding
common_peak2-25969-148-160-0.586337249527503-3.95873070483975	chr19	53389768	53390692	+	0	NA	intron (NM_001008542, intron 1 of 5)	MIRm|SINE|MIR	5234	NM_001008542	17859	Mm.2154	NM_010847	ENSMUSG00000025025	Mxi1	ENSMUSG00000067085|Gm10197|Mad2|bHLHc11	Max interacting protein 1	protein-coding
common_peak1-9161-8-4-0.683294323060208-1.21878474469819	chr11	77808119	77808548	+	0	NA	intron (NM_174852, intron 2 of 14)	PB1D10|SINE|Alu	12015	NM_174852	268448	Mm.274329	NM_174852	ENSMUSG00000037791	Phf12	2410142K10Rik|F630045O13|PF1|mKIAA1523	PHD finger protein 12	protein-coding
common_peak1-7943-14-18--0.348711353085941-0.360333814299795	chr1	153092542	153093219	+	0	NA	Intergenic	RSINE1|SINE|B4	-98748	NM_001039512	117198	Mm.33764	NM_028582	ENSMUSG00000023150	Ivns1abp	1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850	influenza virus NS1A binding protein	protein-coding
common_peak1-16537-24-27--0.0141450192898871-0.304978344874324	chr5	143112200	143113005	+	0	NA	intron (NM_178398, intron 1 of 11)	intron (NM_178398, intron 1 of 11)	7064	NM_178398	74781	Mm.29432	NM_178398		Wipi2	1110018O08Rik|2510001I10Rik	WD repeat domain, phosphoinositide interacting 2	protein-coding
common_peak2-25739-46-58-0.01535289388696-0.308391271559897	chr19	24555230	24557033	+	0	NA	intron (NM_008846, intron 1 of 14)	intron (NM_008846, intron 1 of 14)	-4167	NM_026520	68034	Mm.440181	NM_026520		Fam122a	2410124L17Rik|2900009I07Rik|ENSMUSG00000051082|Gm9849	family with sequence similarity 122, member A	protein-coding
common_peak2-22096-34-40-0.0245165223831822-0.311623594475992	chr12	80113190	80114656	+	0	NA	Intergenic	B1F|SINE|Alu	-5659	NM_178745	268567	Mm.341747	NM_178745	ENSMUSG00000046157	Tmem229b	6330442E10Rik|9830138K24|AU019070	transmembrane protein 229B	protein-coding
common_peak1-13103-14-11-0.314253659636488-0.435191258261915	chr19	8722749	8723252	+	0	NA	Intergenic	(A)n|Simple_repeat|Simple_repeat	14825	NR_045314	402757	Mm.150255	NR_045314		9830166K06Rik	-	RIKEN cDNA 9830166K06 gene	ncRNA
unique_peak1-6186-9-0-3.18961340640422-3.01029995663981	chr6	146951412	146951937	+	0	NA	intron (NM_001170433, intron 12 of 27)	intron (NM_001170433, intron 12 of 27)	-29385	NM_025620	66532	Mm.45888	NM_025620	ENSMUSG00000040121	Rep15	2210417D09Rik	RAB15 effector protein	protein-coding
common_peak2-31932-12-16--0.4386868561627-0.368541233333383	chr9	63721285	63721998	+	0	NA	Intergenic	Intergenic	-115840	NM_016769	17127	Mm.7320	NM_016769	ENSMUSG00000032402	Smad3	AU022421|Madh3	SMAD family member 3	protein-coding
common_peak2-30632-25-39--0.460078189542257-0.621525249893804	chr7	97399909	97400725	+	0	NA	intron (NM_183293, intron 2 of 10)	intron (NM_183293, intron 2 of 10)	13625	NM_029256	75338	Mm.487222	NM_029256	ENSMUSG00000030617	Ccdc83	4930549K11Rik|4930554C01Rik|4932423M01Rik	coiled-coil domain containing 83	protein-coding
common_peak2-21277-7-10--0.660340788339108-1.12966497611638	chr11	69991587	69992102	+	0	NA	Intergenic	Intergenic	11719	NM_010796	17312	Mm.252405	NM_010796	ENSMUSG00000000318	Clec10a	CD301a|M-ASGP-BP-1|Mgl|Mgl1	C-type lectin domain family 10, member A	protein-coding
common_peak1-17325-21-9-1.24756117037887-1.83731222263754	chr6	145977326	145978180	+	0	NA	Intergenic	Intergenic	95086	NM_010656	16651	Mm.49689	NM_010656	ENSMUSG00000030255	Sspn	Krag	sarcospan	protein-coding
common_peak1-15386-8-27--1.80213250411003-2.66623981987189	chr4	70409927	70410372	+	0	NA	Intergenic	Intergenic	-214187	NM_172694	230316	Mm.251188	NM_172694		Megf9	4933405H16Rik|9630025C07|Egfl5|mKIAA0818	multiple EGF-like-domains 9	protein-coding
common_peak2-29519-76-69-0.632661368918315-2.26968434926812	chr6	34865479	34867649	+	0	NA	Intergenic	B1F2|SINE|Alu	-4396	NM_009292	20899	Mm.5171	NM_009292	ENSMUSG00000029848	Stra8	-	stimulated by retinoic acid gene 8	protein-coding
common_peak1-16624-19-9-1.08075923177432-1.37307999835977	chr6	7847587	7848336	+	0	NA	Intergenic	ORR1A3-int|LTR|MaLR	52737	NM_052993	94192	Mm.102752	NM_052993	ENSMUSG00000042460	C1galt1	2210410E06Rik|AV284120|T-synthase	core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1	protein-coding
unique_peak1-1149-8-3-1.00522241794757-1.39487600375387	chr11	97987725	97988121	+	0	NA	intron (NM_028149, intron 2 of 14)	B1_Mus2|SINE|Alu	23007	NM_028149	72194	Mm.218350	NM_028149	ENSMUSG00000020883	Fbxl20	2610511F20Rik|4632423N09Rik|AI849362|AL117906|C86145|Fbl2|Scr|mKIAA4147	F-box and leucine-rich repeat protein 20	protein-coding
unique_peak2-38224-6-5--0.0195643903408542-0.947717972411649	chr6	115316542	115316985	+	0	NA	intron (NM_001127330, intron 1 of 7)	B3|SINE|B2	5524	NM_001127330	19016	Mm.3020	NM_011146	ENSMUSG00000000440	Pparg	Nr1c3|PPAR-gamma|PPAR-gamma2|PPARgamma|PPARgamma2	peroxisome proliferator activated receptor gamma	protein-coding
unique_peak2-36370-2-5--1.50241675698448-1.08602067057793	chr2	113457153	113457408	+	0	NA	intron (NM_001285459, intron 12 of 16)	intron (NM_001285459, intron 12 of 16)	-67967	NM_001287818	14260	Mm.4938	NM_010230	ENSMUSG00000044042	Fmn1	Fmn|ld	formin 1	protein-coding
common_peak1-17824-36-42-0.0530563314656565-0.323497957212832	chr7	105481513	105482783	+	0	NA	Intergenic	Intergenic	-24111	NM_025408	66190	Mm.334041	NM_025408	ENSMUSG00000030760	Acer3	1110057L18Rik|5430429L08Rik|AV015045|Phca	alkaline ceramidase 3	protein-coding
unique_peak1-2621-12-5-1.06381348436648-1.78669045979184	chr16	38184296	38185105	+	0	NA	intron (NM_019827, intron 4 of 10)	intron (NM_019827, intron 4 of 10)	-95354	NR_033221	414072	Mm.483602	NR_033221		BC031361	-	cDNA sequence BC031361	ncRNA
common_peak1-11856-65-123--0.462030370909748-1.41571809622601	chr16	91647066	91648514	+	0	NA	promoter-TSS (NM_010256)	promoter-TSS (NM_010256)	-279	NM_019973	20658	Mm.46401	NM_019973	ENSMUSG00000022961	Son	2900011L12Rik|AA409051|AU067731|C81487|mKIAA1019|nrebp	Son DNA binding protein	protein-coding
common_peak1-19514-18-37--0.935008362215234-1.41893667893732	chrX	169319754	169320466	+	0	NA	Intergenic	Intergenic	-2903261	NR_029457	654820	Mm.34441	NM_001039559	ENSMUSG00000072844	G530011O06Rik	-	RIKEN cDNA G530011O06 gene	ncRNA
unique_peak1-1578-30-2-3.58471290877072-8.33734317840678	chr13	31628627	31630044	+	0	NA	Intergenic	Intergenic	-20704	NM_008239	15220	Mm.44235	NM_008239	ENSMUSG00000038415	Foxq1	HFH-1|Hfh1|Hfh1l|sa	forkhead box Q1	protein-coding
unique_peak1-1510-11-3-1.50869358425161-1.95434855131066	chr13	4278887	4279530	+	0	NA	promoter-TSS (NM_013777)	promoter-TSS (NM_013777)	-563	NM_013777	622402	Mm.27447	NM_013777	ENSMUSG00000021211	Akr1c12	AI266976|Akra	aldo-keto reductase family 1, member C12	protein-coding
unique_peak2-33743-2-8--2.08737925770563-1.65811743852845	chr11	116885641	116885994	+	0	NA	Intergenic	RMER12|LTR|ERVK	-52280	NR_027059	76972	Mm.309167	NR_027059	ENSMUSG00000086859	2810008D09Rik	-	RIKEN cDNA 2810008D09 gene	ncRNA
common_peak2-28389-8-21--1.45420920068973-1.61268301619756	chr4	139380586	139381171	+	0	NA	intron (NM_011039, intron 4 of 8)	intron (NM_011039, intron 4 of 8)	8005	NM_011039	18509	Mm.218760	NM_011039	ENSMUSG00000028736	Pax7	Pax-7	paired box 7	protein-coding
common_peak1-9925-33-36-0.121884196896579-0.346766333527252	chr12	101912353	101913441	+	0	NA	intron (NM_153587, intron 2 of 17)	intron (NM_153587, intron 2 of 17)	50341	NM_153587	73086	Mm.220417	NM_153587	ENSMUSG00000021180	Rps6ka5	3110005L17Rik|6330404E13Rik|AI854034|MSK1|MSPK1|RLPK	ribosomal protein S6 kinase, polypeptide 5	protein-coding
common_peak2-30013-18-18-0.0649916377847664-0.323898164595606	chr6	124931473	124932172	+	0	NA	Intergenic	B3A|SINE|B2	-14916	NM_175696	319352	Mm.295327	NM_175696	ENSMUSG00000030329	Pianp	AI255183|AU067746|C530028O21Rik|Panp	PILR alpha associated neural protein	protein-coding
common_peak2-29538-28-28-0.194978124693891-0.390124689062469	chr6	38848586	38849465	+	0	NA	Intergenic	Intergenic	-19960	NM_011539	21391	Mm.4054	NM_011539	ENSMUSG00000029925	Tbxas1	CYP5|CYP5A1|THAS|TS|TXAS|TXS	thromboxane A synthase 1, platelet	protein-coding
unique_peak1-10-22-3-2.6472841050874-4.58930897763324	chr1	92814302	92815464	+	0	NA	intron (NM_053015, intron 1 of 15)	intron (NM_053015, intron 1 of 15)	3206	NM_053015	171531	Mm.105208	NM_053015	ENSMUSG00000026303	Mlph	2210418F23Rik|5031433I09Rik|AW228792|D1Wsu84e|Slac-2a|l(1)-3Rk|l1Rk3|ln	melanophilin	protein-coding
common_peak1-15905-16-25--0.58217607587303-0.633951497070961	chr5	21185728	21186413	+	0	NA	intron (NM_178728, intron 2 of 4)	intron (NM_178728, intron 2 of 4)	21093	NM_178728	242864	Mm.153292	NM_178728	ENSMUSG00000044968	Napepld	A530089G06|Mbldc1|NAPE-PLD	N-acyl phosphatidylethanolamine phospholipase D	protein-coding
common_peak2-29401-24-10-1.33377828413042-2.22881803703862	chr6	91389650	91390237	+	0	NA	intron (NR_045980, intron 1 of 2)	intron (NR_045980, intron 1 of 2)	905	NR_045980	75787	Mm.30842	NR_045980	ENSMUSG00000097693	4930471M09Rik	4930427C17Rik	RIKEN cDNA 4930471M09 gene	ncRNA
common_peak1-14653-19-21--0.0567442919756109-0.301029995663971	chr3	57446706	57447609	+	0	NA	Intergenic	L1MA4|LINE|L1	8449	NM_175095	52245	Mm.21901	NM_175095		Commd2	1190017G07Rik|AI047739|D3Ertd176e|HSPC042	COMM domain containing 2	protein-coding
unique_peak1-5637-13-2-2.19350952991661-3.03832868024006	chr6	17813026	17813734	+	0	NA	intron (NM_022332, intron 9 of 15)	intron (NM_022332, intron 9 of 15)	114210	NM_022332	64213	Mm.12051	NM_022332	ENSMUSG00000029534	St7	9430001H04Rik|Fam4a2|HELG|RAY1|SEN4|TSG7	suppression of tumorigenicity 7	protein-coding
common_peak1-13215-26-36--0.281554273470488-0.419637632935626	chr19	24173502	24174561	+	0	NA	exon (NM_011597, exon 20 of 23)	exon (NM_011597, exon 20 of 23)	-68522	NM_001114174	381217	Mm.426078	NM_001114174	ENSMUSG00000071604	Fam189a2	AI414343|AI666772|Gm967	family with sequence similarity 189, member A2	protein-coding
unique_peak1-5615-11-3-1.50869358425161-1.95434855131066	chr6	125271745	125272349	+	0	NA	exon (NM_011324, exon 1 of 12)	exon (NM_011324, exon 1 of 12)	689	NM_011324	20276	Mm.144114	NM_011324	ENSMUSG00000030340	Scnn1a	ENaC|SCNEA|Scnn1|mENaC	sodium channel, nonvoltage-gated 1 alpha	protein-coding
common_peak1-11522-43-22-1.25900122946669-3.47380072378139	chr16	93731961	93733554	+	0	NA	intron (NM_026700, intron 2 of 3)	B1F|SINE|Alu	20605	NM_027293	70028	Mm.23230	NM_026700	ENSMUSG00000022946	Dopey2	0610038M01Rik|2610510B01Rik|AI503246|C21orf5|mKIAA0933	dopey family member 2	protein-coding
unique_peak1-6314-18-8-1.14299414978604-1.45476480588849	chr7	44668117	44668904	+	0	NA	Intergenic	Intergenic	1851394	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak2-38969-6-6--0.241956811677302-0.947717972411649	chr8	34617789	34618221	+	0	NA	Intergenic	ORR1A0|LTR|MaLR	23222	NR_033589	628431	Mm.376526	NR_033589		Hmgb1-rs17	Hmg1-rs17	high mobility group box 1, related sequence 17	pseudo
common_peak1-9352-15-16--0.075298090694683-0.301029995663976	chr11	97315887	97316506	+	0	NA	intron (NM_021493, intron 5 of 18)	(TCTCCC)n|Simple_repeat|Simple_repeat	4722	NM_021493	58996	Mm.394118	NM_021493	ENSMUSG00000049807	Arhgap23	A330041B18Rik	Rho GTPase activating protein 23	protein-coding
unique_peak2-37923-2-4--1.23938235115068-0.931118710592187	chr5	144963606	144963974	+	0	NA	intron (NM_027410, intron 16 of 24)	B3A|SINE|B2	12635	NM_010800	17341	Mm.386767	NM_010800	ENSMUSG00000052271	Bhlha15	1810009C13Rik|Bhlhb8|MIST-1|Mist1	basic helix-loop-helix family, member a15	protein-coding
common_peak2-29429-39-73--0.593692118709797-1.33296683454087	chr6	8509204	8510711	+	0	NA	intron (NM_133236, intron 3 of 7)	B3|SINE|B2	39899	NM_001286729	170772	Mm.210787	NM_133236	ENSMUSG00000029638	Glcci1	2310047L21Rik|A130036A18Rik|Fam117c|Gig18|Tssn1	glucocorticoid induced transcript 1	protein-coding
common_peak1-11970-11-10-0.0492619656143161-0.31137425193576	chr17	6824673	6825237	+	0	NA	non-coding (NR_028305, exon 2 of 9).2	non-coding (NR_028305, exon 2 of 9).2	688	NR_028305	100040525	Mm.472852	NR_028305		Tmem181c-ps	100040596|ENSMUSG00000079729|ENSMUSG00000079731|Tmem181d-ps	transmembrane protein 181C, pseudogene	pseudo
common_peak2-31489-16-19--0.203664452619301-0.325169893479371	chr8	106615597	106616559	+	0	NA	Intergenic	Intergenic	-9447	NM_009868	12562	Mm.21767	NM_009868	ENSMUSG00000031871	Cdh5	7B4|AA408225|Cd144|VE-Cad|VECD|VEcad|Vec	cadherin 5	protein-coding
common_peak2-25755-12-6-0.841421063030034-1.58711810488664	chr19	29468288	29468664	+	0	NA	Intergenic	Intergenic	-16933	NM_021396	58205	Mm.116737	NM_021396		Pdcd1lg2	B7-DC|Btdc|F730015O22Rik|PD-L2	programmed cell death 1 ligand 2	protein-coding
common_peak1-12035-20-69--1.64120823235377-5.83587913882593	chr17	17826658	17827502	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-13825	NM_001104539	626942	Mm.404019	NM_001104539	ENSMUSG00000092120	Vmn2r90	EG626942	vomeronasal 2, receptor 90	protein-coding
common_peak1-7538-19-21--0.0567442919756109-0.301029995663971	chr1	34851717	34852502	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-6458	NM_183019	226970	Mm.41604	NM_183019	ENSMUSG00000037509	Arhgef4	9330140K16Rik|Asef|ENSMUSG00000070955	Rho guanine nucleotide exchange factor (GEF) 4	protein-coding
unique_peak2-33584-1-10--3.08648862885404-2.57096726280955	chr11	86883232	86883519	+	0	NA	intron (NM_025638, intron 1 of 9)	MTD|LTR|MaLR	4264	NM_025638	66569	Mm.281887	NM_025638	ENSMUSG00000061666	Gdpd1	2610020H15Rik	glycerophosphodiester phosphodiesterase domain containing 1	protein-coding
unique_peak2-35940-3-5--0.998945590680433-0.96108193396963	chr19	9066049	9066471	+	0	NA	intron (NR_104460, intron 1 of 6)	intron (NR_104460, intron 1 of 6)	2486	NM_001286518	66395	Mm.203866	NM_009643	ENSMUSG00000069833	Ahnak	DY6	AHNAK nucleoprotein (desmoyokin)	protein-coding
common_peak1-13040-23-26--0.0331199976543877-0.301029995663988	chr19	5728995	5729910	+	0	NA	TTS (NM_020491)	TTS (NM_020491)	214	NM_181452	17826	Mm.391142	NM_023166	ENSMUSG00000024939	Fam89b	1110021A21Rik|MMTV|Mtvr2	family with sequence similarity 89, member B	protein-coding
common_peak2-19808-5-8--0.874305337448166-1.10484139239135	chr1	88275913	88276387	+	0	NA	Intergenic	Intergenic	8566	NM_010341	14767	Mm.389159	NM_010341	ENSMUSG00000026237	Nmur1	FM-3|Gpr66|NMU-R1|NMU1R|NmU-R	neuromedin U receptor 1	protein-coding
common_peak1-13182-13-5-1.19350952991661-1.95509489018123	chr19	17255480	17256235	+	0	NA	intron (NM_181348, intron 11 of 19)	intron (NM_181348, intron 11 of 19)	158138	NM_001136484	14537	Mm.244825	NM_010265	ENSMUSG00000038843	Gcnt1	5630400D21Rik|B130048E03|C2 GlcNAcT|C2GNT|IGnT	glucosaminyl (N-acetyl) transferase 1, core 2	protein-coding
common_peak2-26354-7-6--0.00826409175941478-0.97990265578305	chr2	37443322	37443759	+	0	NA	intron (NM_009261, intron 15 of 16)	intron (NM_009261, intron 15 of 16)	59265	NM_009261	20744	Mm.237095	NM_009261	ENSMUSG00000026915	Strbp	6430510M02Rik|AI852513|C230082I21Rik|C86322|Spnr	spermatid perinuclear RNA binding protein	protein-coding
common_peak2-20630-11-7-0.508693584251613-1.21681515183528	chr10	80603272	80603876	+	0	NA	intron (NM_010731, intron 1 of 2)	intron (NM_010731, intron 1 of 2)	4558	NM_010731	16969	Mm.20920	NM_010731	ENSMUSG00000035011	Zbtb7a	9030619K07Rik|9130006G12Rik|AI452336|FBI-1|Lrf|Pokemon|Zbtb7	zinc finger and BTB domain containing 7a	protein-coding
unique_peak1-4799-9-3-1.18961340640422-1.57096726280955	chr3	133316918	133317435	+	0	NA	Intergenic	L1_Mm|LINE|L1	-109822	NM_001040400	214133	Mm.347816	NM_145989	ENSMUSG00000040943	Tet2	Ayu17-449|E130014J05Rik|mKIAA1546	tet methylcytosine dioxygenase 2	protein-coding
common_peak1-16785-29-17-0.942365079172799-1.68242911687175	chr6	39377067	39377767	+	0	NA	Intergenic	B2_Mm1a|SINE|B2	-7049	NM_018810	54484	Mm.270484	NM_018810	ENSMUSG00000029922	Mkrn1	RFP	makorin, ring finger protein, 1	protein-coding
unique_peak2-39556-1-6--2.43441193227435-1.56314192529759	chr9	70242415	70242841	+	0	NA	intron (NM_181072, intron 26 of 27)	B2_Mm2|SINE|B2	10932	NR_049200	100885839		NR_049200	miRBase:MI0019195	Mir5626	mmu-mir-5626	microRNA mir-5626	ncRNA
common_peak2-31413-23-26--0.0331199976543877-0.301029995663988	chr8	94098102	94099168	+	0	NA	intron (NM_011936, intron 8 of 8)	MLT1K|LTR|MaLR	226918	NM_001253822	16373	Mm.238044	NM_008393	ENSMUSG00000031734	Irx3	AI894186	Iroquois related homeobox 3	protein-coding
common_peak2-23539-10-11--0.228547155712387-0.31137425193576	chr15	77908441	77909022	+	0	NA	intron (NM_007583, intron 1 of 3)	intron (NM_007583, intron 1 of 3)	40979	NM_007583	12300	Mm.277338	NM_007583		Cacng2	AW060990|B230105C07Rik|B930041E13Rik|stargazer|stargazin|stg|wag|waggler	calcium channel, voltage-dependent, gamma subunit 2	protein-coding
unique_peak2-36152-4-11--1.6084230145744-1.68134727924692	chr2	25167814	25168434	+	0	NA	intron (NM_001177656, intron 3 of 19)	intron (NM_001177656, intron 3 of 19)	6583	NM_008169	14810	Mm.278672	NM_008169	ENSMUSG00000026959	Grin1	GluN1|GluRdelta1|GluRzeta1|M100174|NMD-R1|NMDAR1|NR1|Nmdar|Rgsc174	glutamate receptor, ionotropic, NMDA1 (zeta 1)	protein-coding
unique_peak2-35034-12-5-1.06381348436648-1.78669045979184	chr15	103515211	103515579	+	0	NA	Intergenic	Intergenic	-119883	NM_008134	14663	Mm.219621	NM_008134	ENSMUSG00000022491	Glycam1	MC26|Sgp50|glyCAM-1	glycosylation dependent cell adhesion molecule 1	protein-coding
unique_peak1-4013-7-4-0.477162735410827-1.09384600808989	chr2	36200999	36201461	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-31068	NM_146947	258949	Mm.377765	NM_146947	ENSMUSG00000068950	Olfr338	MOR136-5	olfactory receptor 338	protein-coding
common_peak2-28239-8-8--0.164702583494742-1.00793137938329	chr4	123411201	123411740	+	0	NA	TTS (NM_023423)	TTS (NM_023423)	-16041	NM_001030274	595136	Mm.42805	NM_001030274	ENSMUSG00000028648	Ndufs5	AI256693	NADH dehydrogenase (ubiquinone) Fe-S protein 5	protein-coding
common_peak1-12064-17-34--0.910986678739929-1.23560027455358	chr17	23770956	23771704	+	0	NA	intron (NM_001033339, intron 4 of 9)	B1F2|SINE|Alu	10906	NM_001033339	240047	Mm.235343	NM_001033339	ENSMUSG00000023903	Mmp25	F730048C11Rik|Leukolysin|MMP20|MT6-MMP	matrix metallopeptidase 25	protein-coding
common_peak1-19442-17-19--0.103631756682325-0.301029995663974	chrX	96025690	96026450	+	0	NA	intron (NM_052976, intron 2 of 24)	intron (NM_052976, intron 2 of 24)	60254	NM_052976	94190	Mm.254336	NM_052976		Ophn1	C130037N19Rik	oligophrenin 1	protein-coding
common_peak1-14528-19-8-1.23276232521937-1.61268301619756	chr3	29976742	29977760	+	0	NA	Intergenic	Intergenic	-65125	NM_007963	14013	Mm.56965	NM_007963	ENSMUSG00000027684	Mecom	D630039M04Rik|Evi-1|Evi1|Jbo|Mds|Mds1|Mds1-Evi1|Prdm3|Znfpr1b1	MDS1 and EVI1 complex locus	protein-coding
unique_peak2-36269-8-19--1.31670567693979-1.30305656033811	chr2	60369141	60369787	+	0	NA	intron (NM_008867, intron 2 of 29)	RMER17C|LTR|ERVK	21901	NM_008867	18779	Mm.5092	NM_008867	ENSMUSG00000054580	Pla2r1	Pla2-r|Pla2g1br|Pla2r	phospholipase A2 receptor 1	protein-coding
unique_peak2-37251-4-11--1.6084230145744-1.68134727924692	chr4	101647775	101648315	+	0	NA	Intergenic	MERVL-int|LTR|ERVL	-11400	NM_001085520	381536	Mm.297685	NM_001085520		Gm12789	OTTMUSG00000008445	predicted gene 12789	protein-coding
common_peak2-26811-14-7-0.899216160357645-0.947446088118041	chr2	151008837	151009370	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	85122	NM_001097977	433486	Mm.422661	NM_001097977	ENSMUSG00000079006	Gm14151	OTTMUSG00000015806	predicted gene 14151	protein-coding
common_peak2-22408-23-27--0.0855874175485232-0.30512735654709	chr13	34162783	34163874	+	0	NA	intron (NM_026512, intron 6 of 6)	intron (NM_026512, intron 6 of 6)	6549	NM_009450	22151	Mm.422827	NM_009450	ENSMUSG00000058672	Tubb2a	M(beta)2|Tubb2	tubulin, beta 2A class IIA	protein-coding
common_peak2-26328-11-13--0.298661337805991-0.337263207250336	chr2	34406855	34407417	+	0	NA	intron (NM_001290625, intron 7 of 11)	B1_Mus2|SINE|Alu	144765	NM_001290626	227743	Mm.270866	NM_177345	ENSMUSG00000038696	Mapkap1	AI591529|D230039K05Rik|Sin1	mitogen-activated protein kinase associated protein 1	protein-coding
unique_peak2-35014-1-6--2.43441193227435-1.56314192529759	chr15	101926025	101926476	+	0	NA	3' UTR (NM_145625, exon 15 of 15)	3' UTR (NM_145625, exon 15 of 15)	-7169	NM_153533	209039	Mm.29389	NM_153533	ENSMUSG00000037003	Tenc1	C1-ten|nep|nph	tensin like C1 domain-containing phosphatase	protein-coding
unique_peak2-33790-2-10--2.37688587490062-2.09384600808989	chr11	119925159	119925642	+	0	NA	TTS (NM_009734)	TTS (NM_009734)	-16941	NM_007377	11302	Mm.6826	NM_007377	ENSMUSG00000025375	Aatk	AATYK|aatyk1|mKIAA0641	apoptosis-associated tyrosine kinase	protein-coding
unique_peak2-38429-5-6--0.511735258063458-0.947717972411649	chr7	25705485	25705855	+	0	NA	intron (NM_001130152, intron 14 of 28)	B2_Mm1a|SINE|B2	16305	NM_001130152	16801	Mm.3181	NM_008488	ENSMUSG00000040940	Arhgef1	Lbcl2|Lsc	Rho guanine nucleotide exchange factor (GEF) 1	protein-coding
unique_peak2-39368-3-7--1.41398308995928-1.23214870625617	chr9	13321860	13322192	+	0	NA	Intergenic	Intergenic	87445	NR_028271	18689	Mm.41972	NM_008835		Phxr4	Sp5	per-hexamer repeat gene 4	ncRNA
unique_peak2-39124-7-9--0.522837264589173-1.05908390183068	chr8	83972860	83973266	+	0	NA	intron (NM_001297596, intron 1 of 24)	intron (NM_001297596, intron 1 of 24)	106602	NM_001297593	234515	Mm.324468	NM_001024617	ENSMUSG00000037940	Inpp4b	E130107I17Rik	inositol polyphosphate-4-phosphatase, type II	protein-coding
unique_peak1-160-15-0-4.01216475055566-5.11750992628768	chr1	73061328	73062118	+	0	NA	promoter-TSS (NR_038001)	promoter-TSS (NR_038001)	750	NM_009407	21958	Mm.425024	NM_009407	ENSMUSG00000026182	Tnp1	Stp-1|TP1|Tp-1	transition protein 1	protein-coding
common_peak2-27722-14-19--0.422711934529718-0.403453972741636	chr3	122983838	122984492	+	0	NA	intron (NM_027135, intron 3 of 22)	Lx8|LINE|L1	13751	NM_027135	69608	Mm.29293	NM_027135	ENSMUSG00000039234	Sec24d	2310020L09Rik|Gm1349	Sec24 related gene family, member D (S. cerevisiae)	protein-coding
unique_peak2-39897-2-9--2.23938235115068-1.87199725847353	chrX	88113256	88113858	+	0	NA	Intergenic	Intergenic	-23924	NM_001101450	212952	Mm.477436	NM_001101450	ENSMUSG00000091497	Gm44	-	predicted gene 44	protein-coding
unique_peak1-1681-12-1-2.64877598508764-3.36932189928148	chr13	73346325	73346844	+	0	NA	Intergenic	MTE2b-int|LTR|MaLR	-51361	NM_018885	50916	Mm.103784	NM_018885	ENSMUSG00000021604	Irx4	-	Iroquois related homeobox 4 (Drosophila)	protein-coding
unique_peak1-3897-15-6-1.20480982849805-1.32521814697968	chr2	20752794	20753389	+	0	NA	Intergenic	B3|SINE|B2	136257	NM_001081364	71435	Mm.28507	NM_001081364	ENSMUSG00000036591	Arhgap21	5530401C11Rik|AA416458|ARHGAP10	Rho GTPase activating protein 21	protein-coding
common_peak1-18869-13-11-0.193509529916613-0.379391706698377	chr9	22156570	22157329	+	0	NA	intron (NM_028390, intron 17 of 23)	intron (NM_028390, intron 17 of 23)	-21815	NR_033622	625603	Mm.37987	NR_033622		Gm6607	EG625603	40S ribosomal protein S20 pseudogene	pseudo
common_peak2-20256-77-91-0.260964623498984-0.691613651230254	chr1	185362344	185363732	+	0	NA	Intergenic	Intergenic	478119	NM_016928	53791	Mm.116894	NM_016928	ENSMUSG00000079164	Tlr5	-	toll-like receptor 5	protein-coding
common_peak1-15065-13-15--0.221527969362231-0.308519316180257	chr3	123679722	123680479	+	0	NA	Intergenic	Intergenic	-286330	NR_121616	83398	Mm.443908	NM_031186	ENSMUSG00000027977	Ndst3	4921531K01Rik|4930511P15Rik|N-HSST 3|NDST-3	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	protein-coding
common_peak1-11811-57-76--0.000753500615972236-0.302449268781736	chr16	64770043	64771711	+	0	NA	promoter-TSS (NM_026273)	promoter-TSS (NM_026273)	-112	NM_026273	67609	Mm.212157	NM_026273	ENSMUSG00000059920	4930453N24Rik	AI649104	RIKEN cDNA 4930453N24 gene	protein-coding
common_peak2-23615-36-43-0.0198894675304571-0.310901174692144	chr15	81858660	81860055	+	0	NA	intron (NM_010247, intron 7 of 12)	B4A|SINE|B4	12558	NM_010247	14375	Mm.288809	NM_010247	ENSMUSG00000022471	Xrcc6	70kDa|G22p1|Ku70	X-ray repair complementing defective repair in Chinese hamster cells 6	protein-coding
common_peak1-16060-9-10--0.269818212233077-1.05503135781948	chr5	45136950	45137522	+	0	NA	intron (NM_001286348, intron 1 of 8)	MIRb|SINE|MIR	53749	NM_010698	16826	Mm.25785	NM_010698	ENSMUSG00000039706	Ldb2	AI035351|AW146358|CLIM1|CLP-36|Ldb3	LIM domain binding 2	protein-coding
common_peak1-7529-18-21--0.146512467408946-0.306326795069975	chr1	33813621	33814472	+	0	NA	intron (NM_145392, intron 1 of 2)	intron (NM_145392, intron 1 of 2)	549	NM_145392	213539	Mm.247037	NM_145392	ENSMUSG00000042215	Bag2	2610042A13Rik|BC016230	BCL2-associated athanogene 2	protein-coding
unique_peak2-35381-2-6--1.72480917832092-1.26211192963361	chr17	29256007	29256371	+	0	NA	Intergenic	Intergenic	-15812	NM_001002786	442827	Mm.440341	NM_001002786	ENSMUSG00000064147	Rab44	9830134C10Rik	RAB44, member RAS oncogene family	protein-coding
common_peak1-16392-16-22--0.405298313788951-0.440610794044987	chr5	124115874	124116734	+	0	NA	intron (NM_019765, intron 1 of 23)	intron (NM_019765, intron 1 of 23)	18066	NM_001291229	56430	Mm.241109	NM_019765	ENSMUSG00000049550	Clip1	1110007I12Rik|4631429H07Rik|AV017631|C81039|CLIP-170|CLIP170|CYLN1|Clip50|Rsn|mKIAA4046|restin	CAP-GLY domain containing linker protein 1	protein-coding
common_peak2-29313-20-22--0.03548717146582-0.301029995663994	chr5	146675542	146676609	+	0	NA	intron (NM_007818, intron 9 of 12)	B1_Mur4|SINE|Alu	15355	NM_007818	13112	Mm.332844	NM_007818	ENSMUSG00000056035	Cyp3a11	AI256190|Cyp3a|IIIAm1|Pcn	cytochrome P450, family 3, subfamily a, polypeptide 11	protein-coding
common_peak1-16709-29-67--0.975172760635228-2.5182653668895	chr6	28260911	28261898	+	0	NA	Intergenic	(CCA)n|Simple_repeat|Simple_repeat	-49803	NM_001081678	627049	Mm.84441	NM_001081678	ENSMUSG00000039841	Zfp800	AA407452|Znf800	zinc finger protein 800	protein-coding
common_peak1-12545-12-26--1.10611151707583-1.26025077975594	chr18	5989525	5990123	+	0	NA	Intergenic	Intergenic	146272	NM_029277	75415	Mm.239675	NM_029277	ENSMUSG00000041225	Arhgap12	2810011M08Rik	Rho GTPase activating protein 12	protein-coding
common_peak1-12507-12-7-0.648775985087639-0.697979855752659	chr17	94834849	94835591	+	0	NA	Intergenic	Intergenic	314012	NM_176917	76781	Mm.139146	NM_176917	ENSMUSG00000055660	Mettl4	2410198H06Rik|A730091E08Rik|AV296509|HsT661	methyltransferase like 4	protein-coding
unique_peak1-1195-7-3-0.799090830298189-1.23214870625617	chr11	103097458	103097909	+	0	NA	intron (NM_016896, intron 6 of 15)	intron (NM_016896, intron 6 of 15)	-17937	NM_177801	328019	Mm.189646	NM_177801	ENSMUSG00000044787	Spata32	4933400C05Rik|VAD1.2	spermatogenesis associated 32	protein-coding
common_peak1-9814-27-34--0.137737066049731-0.314192449397093	chr12	69892151	69893323	+	0	NA	Intergenic	L1MB7|LINE|L1	367436	NM_009093	20090	Mm.379006	NM_009093	ENSMUSG00000034892	Rps29	-	ribosomal protein S29	protein-coding
unique_peak2-36551-11-8-0.338768582809301-1.14218153353838	chr2	167015795	167016184	+	0	NA	Intergenic	Intergenic	-1671	NM_008420	16500	Mm.205341	NM_008420		Kcnb1	Kcr1-1|Kv2.1|Shab	potassium voltage gated channel, Shab-related subfamily, member 1	protein-coding
common_peak2-30752-47-89--0.557011671563127-1.44267101396302	chr7	119895148	119896605	+	0	NA	intron (NM_001166584, intron 1 of 13)	intron (NM_001166584, intron 1 of 13)	-7022	NM_001166585	21676	Mm.24685	NM_009346	ENSMUSG00000055320	Tead1	2610024B07Rik|B230114H05Rik|Gtrgeo5|TEAD-1|TEF-1|Tcf13|mTEF-1	TEA domain family member 1	protein-coding
common_peak1-16856-34-17-1.21214352555895-2.67563291309484	chr6	54363615	54364816	+	0	NA	intron (NR_033635, intron 1 of 13)	intron (NR_033635, intron 1 of 13)	16000	NR_033635	100042056	Mm.448157	NM_198118	ENSMUSG00000073067	9130019P16Rik	6430501H15Rik|OTTMUSG00000023151	RIKEN cDNA 9130019P16 gene	ncRNA
unique_peak2-36755-8-17--1.16470258349474-1.02063122982878	chr3	61363881	61364378	+	0	NA	Intergenic	RLTR20B3|LTR|ERVK	195700	NM_028712	74012	Mm.422674	NM_028712	ENSMUSG00000036894	Rap2b	4021402C18Rik|AA408554	RAP2B, member of RAS oncogene family	protein-coding
common_peak2-23791-24-41--0.599107520011044-0.83607543869935	chr15	99701956	99702802	+	0	NA	intron (NM_001113545, intron 1 of 10)	AT_rich|Low_complexity|Low_complexity	3508	NM_001113545	65970	Mm.33207	NM_023063	ENSMUSG00000023022	Lima1	Eplin	LIM domain and actin binding 1	protein-coding
common_peak2-23309-18-19--0.00900894365901106-0.306598483909153	chr15	36609152	36609926	+	0	NA	Intergenic	Intergenic	-70811	NM_008774	18458	Mm.371570	NM_008774	ENSMUSG00000022283	Pabpc1	PABP|Pabp1|PabpI|Pabpl1|ePAB	poly(A) binding protein, cytoplasmic 1	protein-coding
common_peak1-12713-47-58-0.0521983754047062-0.317454636273721	chr18	49754907	49755943	+	0	NA	Intergenic	Intergenic	72482	NR_033785	67321	Mm.245802	NR_033785		1700044K03Rik	-	RIKEN cDNA 1700044K03 gene	ncRNA
common_peak2-28765-59-68-0.216839544094409-0.512540498859089	chr5	45856391	45857988	+	0	NA	Intergenic	Intergenic	12199	NM_001163317	624224	Mm.475609	NM_001163317	ENSMUSG00000049530	Clrn2	EG624224	clarin 2	protein-coding
common_peak2-25649-8-10--0.454209200689727-1.078512453669	chr19	10100570	10101049	+	0	NA	intron (NM_144538, intron 1 of 9)	intron (NM_144538, intron 1 of 9)	8091	NM_144538	74760	Mm.281969	NM_144538	ENSMUSG00000024663	Rab3il1	1200014K04Rik|AI115013|C76746|Rab3ail1	RAB3A interacting protein (rabin3)-like 1	protein-coding
unique_peak2-33002-3-6--1.22133801201688-1.08602067057793	chr10	61452229	61452659	+	0	NA	Intergenic	Intergenic	-10588	NM_007731	12817	Mm.300931	NM_007731	ENSMUSG00000058806	Col13a1	-	collagen, type XIII, alpha 1	protein-coding
unique_peak1-2993-8-0-3.00522241794757-2.70926996097583	chr17	80809635	80810107	+	0	NA	intron (NM_009231, intron 17 of 21)	intron (NM_009231, intron 17 of 21)	-36989	NR_028385	791338	Mm.204722	NR_028385		Gm10190	ENSMUSG00000066938	predicted gene 10190	ncRNA
common_peak2-27216-16-12-0.417823924126969-0.489164546851866	chr3	50906202	50906851	+	0	NA	Intergenic	IAPEy-int|LTR|ERVK	-121843	NM_009834	12457	Mm.86541	NM_009834	ENSMUSG00000023087	Ccrn4l	AU043840|Ccr4|nocturnin	CCR4 carbon catabolite repression 4-like (S. cerevisiae)	protein-coding
common_peak2-20102-30-36--0.039777956137077-0.301029995663973	chr1	159888557	159889677	+	0	NA	Intergenic	Intergenic	397274	NM_207583	240843	Mm.329579	NM_207583	ENSMUSG00000004031	Brinp2	6430517E21Rik|BB361039|Fam5b|mKIAA1747	bone morphogenic protein/retinoic acid inducible neural-specific 2	protein-coding
common_peak2-20464-24-53--0.961677599395752-2.00421908169978	chr10	43579078	43580350	+	0	NA	Intergenic	Intergenic	41828	NM_001081054	76563	Mm.5904	NM_001081054	ENSMUSG00000019863	Qrsl1	2700038P16Rik|C80053|GatA	glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1	protein-coding
common_peak2-31468-36-61--0.474875224219121-0.827470873527606	chr8	105900396	105901211	+	0	NA	Intergenic	Intergenic	-29369	NR_036588	69794	Mm.396139	NR_036588		1600027J07Rik	-	RIKEN cDNA 1600027J07 gene	ncRNA
unique_peak1-6645-19-3-2.40268732666169-3.59864904409227	chr8	11315817	11316836	+	0	NA	intron (NM_009932, intron 3 of 47)	intron (NM_009932, intron 3 of 47)	3497	NM_009932	12827	Mm.181021	NM_009932	ENSMUSG00000031503	Col4a2	Col4a-2	collagen, type IV, alpha 2	protein-coding
common_peak2-30036-18-15-0.312919151228352-0.456667090758524	chr6	125482866	125483593	+	0	NA	Intergenic	Intergenic	-19737	NM_011708	22371	Mm.22339	NM_011708	ENSMUSG00000001930	Vwf	6820430P06Rik|AI551257|B130011O06Rik|C630030D09|F8VWF|VWD	Von Willebrand factor homolog	protein-coding
unique_peak1-6710-11-5-0.923731083530457-1.477227296591	chr8	35418120	35418680	+	0	NA	Intergenic	Intergenic	-188634	NR_105820	102465211		NR_105820	miRBase:MI0021930	Mir6395	mmu-mir-6395	microRNA mir-6395	ncRNA
unique_peak1-5952-14-0-3.89921616035764-4.8164799306237	chr6	91617399	91617951	+	0	NA	Intergenic	(CATATA)n|Simple_repeat|Simple_repeat	-16386	NM_009320	21366	Mm.395650	NM_009320	ENSMUSG00000030096	Slc6a6	AA589629|C80501|Taut	solute carrier family 6 (neurotransmitter transporter, taurine), member 6	protein-coding
common_peak1-12253-12-17--0.521149016354673-0.417187467413082	chr17	36001975	36002685	+	0	NA	promoter-TSS (NM_001146711)	promoter-TSS (NM_001146711)	-210	NM_001146711	76448	Mm.359982	NM_175242	ENSMUSG00000034595	Ppp1r18	2310014H01Rik|AA407849|AI450394	protein phosphatase 1, regulatory subunit 18	protein-coding
common_peak2-31119-11-6-0.701338662194009-1.32595962126035	chr8	33898023	33898441	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	162266	NM_001177589	100042715	Mm.291093	NM_001177589		Gm3985	-	predicted gene 3985	protein-coding
unique_peak2-34502-4-12--1.72390023199434-1.85743853830261	chr14	46923944	46924378	+	0	NA	Intergenic	T-rich|Low_complexity|Low_complexity	-75038	NR_037981	100041724	Mm.383311	NM_001099324	ENSMUSG00000079261	Gm15217	OTTMUSG00000019524	predicted gene 15217	ncRNA
unique_peak2-36747-2-8--2.08737925770563-1.65811743852845	chr3	59278294	59278678	+	0	NA	Intergenic	RLTR47_MM|LTR|ERV1	-130308	NM_001162884	242050	Mm.228086	NM_001162884	ENSMUSG00000036334	Igsf10	6530405F15Rik|9030224D03|AA409708|AA536958|AI414626|Adlican2|CMF608	immunoglobulin superfamily, member 10	protein-coding
unique_peak2-37112-3-8--1.58390809140159-1.39487600375387	chr4	3938956	3939346	+	0	NA	intron (NM_181989, intron 3 of 6)	intron (NM_181989, intron 3 of 6)	7659	NM_181989	242285	Mm.98096	NM_181989	ENSMUSG00000028236	Sdr16c5	Rdhe2|Scdr9	short chain dehydrogenase/reductase family 16C, member 5	protein-coding
unique_peak1-6595-17-8-1.04837133676273-1.30305656033811	chr7	144976780	144977653	+	0	NA	Intergenic	Intergenic	347859	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
unique_peak1-2932-10-0-3.35641534500877-3.31132995230379	chr17	54310930	54311437	+	0	NA	Intergenic	(TA)n|Simple_repeat|Simple_repeat	127176	NM_022025	63993	Mm.155241	NM_022025	ENSMUSG00000023945	Slc5a7	CHT1	solute carrier family 5 (choline transporter), member 7	protein-coding
unique_peak1-5425-9-2-1.60465090568306-1.87199725847353	chr5	113219201	113219695	+	0	NA	intron (NM_028901, intron 30 of 43)	intron (NM_028901, intron 30 of 43)	-2864	NR_040675	67360	Mm.59218	NR_040675	ENSMUSG00000098230	1700095B10Rik	-	RIKEN cDNA 1700095B10 gene	ncRNA
common_peak2-20418-34-37-0.134141013557681-0.369793428364259	chr10	26011818	26012877	+	0	NA	intron (NM_172787, intron 18 of 21)	intron (NM_172787, intron 18 of 21)	62834	NM_001115154	268288	Mm.213322	NM_001013766	ENSMUSG00000051354	Samd3	Gm623	sterile alpha motif domain containing 3	protein-coding
common_peak1-18745-10-27--1.45093957704883-2.06249767704514	chr8	124898061	124898789	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-2091	NM_001029994	76014	Mm.241489	NM_001029993	ENSMUSG00000017478	Zc3h18	1190001B23Rik|5830416A07Rik|Nhn1	zinc finger CCCH-type containing 18	protein-coding
common_peak2-28691-18-37--0.935008362215234-1.41893667893732	chr5	33378387	33379260	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	17358	NM_011738	22629	Mm.332314	NM_011738	ENSMUSG00000018965	Ywhah	-	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide	protein-coding
common_peak2-24606-29-26-0.357402578451643-0.590428395010953	chr17	33092111	33092928	+	0	NA	intron (NR_033585, intron 2 of 2)	ORR1B1|LTR|MaLR	-8213	NM_130882	170716	Mm.254838	NM_130882	ENSMUSG00000024055	Cyp4f13	0610030I10Rik|Cypf13	cytochrome P450, family 4, subfamily f, polypeptide 13	protein-coding
common_peak1-15714-21-34--0.559793751678731-0.677299098039755	chr4	141278354	141279201	+	0	NA	intron (NM_001017966, intron 1 of 9)	CpG	557	NM_001017966	68817	Mm.393721	NM_001017966		Ddi2	1110056G13Rik|1700027M01Rik|9130022E05Rik|AI604911|AU040698	DNA-damage inducible protein 2	protein-coding
common_peak2-25989-58-51-0.595510216749405-1.62091282503239	chr19	55218408	55219865	+	0	NA	Intergenic	Intergenic	-36239	NM_009348	21684	Mm.42139	NM_009348	ENSMUSG00000024979	Tectb	Tctnb	tectorin beta	protein-coding
common_peak1-17577-30-48--0.445034434623335-0.674559023890888	chr7	38018720	38019802	+	0	NA	Intergenic	Intergenic	535510	NM_172385	243937	Mm.322505	NM_172385	ENSMUSG00000043456	Zfp536	9630010P11Rik|Znf536|mKIAA0390	zinc finger protein 536	protein-coding
common_peak1-18182-20-14-0.581184188982674-0.690311289528838	chr8	15072156	15073177	+	0	NA	intron (NM_008664, intron 6 of 36)	intron (NM_008664, intron 6 of 36)	15013	NM_008664	17930	Mm.272115	NM_008664	ENSMUSG00000031461	Myom2	AW146149	myomesin 2	protein-coding
common_peak1-10095-93-107-0.356182361342801-1.15506639971691	chr13	24800732	24802233	+	0	NA	intron (NM_029679, intron 15 of 22)	B2_Mm1t|SINE|B2	52324	NM_020567	57441	Mm.12239	NM_020567	ENSMUSG00000006715	Gmnn	AW546347|Gem	geminin	protein-coding
unique_peak2-35556-7-12--0.901348887842903-1.31827279259406	chr17	65704080	65704632	+	0	NA	intron (NM_001289485, intron 14 of 15)	intron (NM_001289485, intron 14 of 15)	185766	NM_001008973	381107	Mm.141275	NM_001008973	ENSMUSG00000045036	Tmem232	E130009J12Rik|Gm940|Tes13-L|Tes13-S	transmembrane protein 232	protein-coding
common_peak1-12634-114-115-0.605973526580796-3.18151589331345	chr18	34758609	34760064	+	0	NA	3' UTR (NM_030147, exon 22 of 22)	3' UTR (NM_030147, exon 22 of 22)	-2214	NM_177773	271508	Mm.417609	NM_177773	ENSMUSG00000049357	4933408B17Rik	-	RIKEN cDNA 4933408B17 gene	protein-coding
common_peak2-21847-28-27-0.245604197763859-0.431536360747188	chr11	121236660	121237071	+	0	NA	intron (NM_139147, intron 1 of 5)	B1F1|SINE|Alu	11653	NR_106095	102465713		NR_106095		Mir7236	mmu-mir-7236	microRNA mir-7236	ncRNA
common_peak1-14423-20-31--0.511925215408807-0.634510163964152	chr2	180220403	180221440	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-13760	NM_018766	18216	Mm.301712	NM_018766	ENSMUSG00000027568	Ntsr1	NT-1R|NTR-1|NTR1	neurotensin receptor 1	protein-coding
common_peak2-28729-13-13--0.0288828914198356-0.309074325783021	chr5	36181572	36182209	+	0	NA	intron (NM_001177700, intron 10 of 16)	intron (NM_001177700, intron 10 of 16)	-54078	NM_027373	70292	Mm.125167	NM_027373	ENSMUSG00000029094	Afap1	2600003E23Rik|9630044L16Rik|AI848729|Afap|mKIAA3018	actin filament associated protein 1	protein-coding
unique_peak2-36801-2-10--2.37688587490062-2.09384600808989	chr3	83450726	83451232	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-72939	NR_036591	69460	Mm.389464	NR_036591		1700028M03Rik	-	RIKEN cDNA 1700028M03 gene	ncRNA
common_peak1-15718-13-17--0.391452970804544-0.364171515310935	chr4	141291331	141291959	+	0	NA	Intergenic	Intergenic	-10945	NM_001081408	75986	Mm.30032	NM_001081408	ENSMUSG00000040706	Agmat	5033405N08Rik	agmatine ureohydrolase (agmatinase)	protein-coding
unique_peak1-2268-7-1-1.79909083029819-1.80617997398389	chr15	78003187	78003524	+	0	NA	intron (NM_025931, intron 1 of 6)	MTEa|LTR|MaLR	1183	NM_025931	67042	Mm.30191	NM_025931	ENSMUSG00000016637	Ift27	2600013G09Rik|Rabl4	intraflagellar transport 27	protein-coding
unique_peak2-33384-4-7--1.02346051385325-1.09384600808989	chr11	49084193	49084639	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-9236	NM_146471	258463	Mm.377517	NM_146471	ENSMUSG00000059864	Olfr1393	MOR256-24	olfactory receptor 1393	protein-coding
common_peak1-15854-43-62--0.194716737976214-0.39202633512402	chr5	3543449	3544615	+	0	NA	intron (NM_001042501, intron 1 of 10)	CpG	199	NM_001042501	68152	Mm.240265	NM_026583		Fam133b	2900022K02Rik|5830415L20Rik	family with sequence similarity 133, member B	protein-coding
common_peak1-7778-36-21-1.01988946753046-2.24027827302618	chr1	93678595	93679950	+	0	NA	Intergenic	Intergenic	-18782	NM_007855	13345	Mm.9474	NM_007855	ENSMUSG00000007805	Twist2	Dermo1|bHLHa39	twist basic helix-loop-helix transcription factor 2	protein-coding
unique_peak1-3825-8-3-1.00522241794757-1.39487600375387	chr2	137133694	137134216	+	0	NA	Intergenic	Intergenic	-191699	NM_013822	16449	Mm.22398	NM_013822	ENSMUSG00000027276	Jag1	ABE2|Gsfabe2|Htu|Ozz|Ser-1	jagged 1	protein-coding
common_peak2-27797-31-43--0.234192947824174-0.398838069828027	chr3	138745012	138746956	+	0	NA	Intergenic	Intergenic	-7819	NM_001040690	229877	Mm.28893	NM_145544	ENSMUSG00000028149	Rap1gds1	BC011279|GDS1	RAP1, GTP-GDP dissociation stimulator 1	protein-coding
common_peak1-10967-8-10--0.454209200689727-1.078512453669	chr15	27630789	27631337	+	0	NA	Intergenic	CT-rich|Low_complexity|Low_complexity	-19766	NM_001242423	223433	Mm.266485	NM_198301	ENSMUSG00000056069	Fam105a	9830126M18	family with sequence similarity 105, member A	protein-coding
common_peak2-21440-7-7--0.200909169701811-0.97990265578305	chr11	86590357	86590666	+	0	NA	intron (NM_026191, intron 12 of 17)	B1F2|SINE|Alu	-19517	NM_001003908	67300	Mm.254588	NM_001003908	ENSMUSG00000047126	Cltc	3110065L21Rik|CHC|R74732	clathrin, heavy polypeptide (Hc)	protein-coding
common_peak1-9381-22-19-0.325356010200042-0.479250674391597	chr11	98741466	98742468	+	0	NA	intron (NM_197940, intron 1 of 7)	intron (NM_197940, intron 1 of 7)	17055	NM_197940	68524	Mm.28661	NM_197940	ENSMUSG00000038013	Wipf2	1110014J05Rik|5730509C05Rik|AA407487|Gm1176|Wich|Wire	WAS/WASL interacting protein family, member 2	protein-coding
common_peak1-8861-57-44-0.774179943749254-2.28033326638858	chr11	32604317	32606308	+	0	NA	intron (NM_001271347, intron 2 of 12)	intron (NM_001271347, intron 2 of 12)	62757	NM_001271347	103583	Mm.28017	NM_134015	ENSMUSG00000020271	Fbxw11	2310065A07Rik|AA536858|BTRC2|BTRCP2|Fbxw1b|HOS	F-box and WD-40 domain protein 11	protein-coding
common_peak1-18204-63-62-0.461032667570673-1.2162050828799	chr8	23037922	23039809	+	0	NA	Intergenic	G-rich|Low_complexity|Low_complexity	4317	NM_139222	246082	Mm.390015	NM_139222	ENSMUSG00000048500	Defb15	BD-15	defensin beta 15	protein-coding
unique_peak1-3656-24-3-2.79320990276772-5.35253599412607	chr19	39060690	39061605	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-20362	NM_028089	72082	Mm.142581	NM_028089	ENSMUSG00000025002	Cyp2c55	2010318C06Rik	cytochrome P450, family 2, subfamily c, polypeptide 55	protein-coding
common_peak1-12531-18-20--0.0793982715504091-0.301029995663976	chr18	80707452	80708404	+	0	NA	Intergenic	L1Md_T|LINE|L1	33357	NR_028424	100039348	Mm.254722	NR_028424		Gm2176	A430076E10Rik	glucosamine-6-phosphate deaminase 1 pseudogene	pseudo
common_peak1-18195-37-24-0.882136881711094-1.82819694957564	chr8	22410747	22412318	+	0	NA	Intergenic	Intergenic	-15556	NM_007850	13237	Mm.436573	NM_007850	ENSMUSG00000074440	Defa3	Defa27|Defcr-3|Defcr3	defensin, alpha, 3	protein-coding
unique_peak1-7300-8-5-0.420259917226415-1.10484139239135	chr9	116218790	116219240	+	0	NA	Intergenic	Intergenic	-134534	NM_009371	21813	Mm.172346	NM_009371	ENSMUSG00000032440	Tgfbr2	1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII	transforming growth factor, beta receptor II	protein-coding
unique_peak1-7209-8-3-1.00522241794757-1.39487600375387	chr9	70037880	70038421	+	0	NA	Intergenic	Intergenic	-17007	NM_181072	71602	Mm.249311	NM_181072	ENSMUSG00000032220	Myo1e	2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3	myosin IE	protein-coding
common_peak1-9502-18-8-1.14299414978604-1.45476480588849	chr11	113100556	113101413	+	0	NA	Intergenic	Intergenic	-30001	NR_040276	319871	Mm.383743	NR_040276	ENSMUSG00000085421	4732490B19Rik	-	RIKEN cDNA 4732490B19 gene	ncRNA
common_peak1-15031-18-25--0.38752056691274-0.421916810733234	chr3	121634926	121635816	+	0	NA	Intergenic	Intergenic	-20873	NM_172525	214137	Mm.229287	NM_172525	ENSMUSG00000039831	Arhgap29	6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1	Rho GTPase activating protein 29	protein-coding
common_peak2-23329-58-35-1.12602493344818-4.08621821320449	chr15	37135228	37136289	+	0	NA	Intergenic	Intergenic	-27033	NM_026496	252973	Mm.244612	NM_026496	ENSMUSG00000022286	Grhl2	0610015A08Rik|BOM|Tcfcp2l3	grainyhead-like 2 (Drosophila)	protein-coding
common_peak1-14075-23-28--0.136213490618491-0.317118655902079	chr2	121139949	121140720	+	0	NA	intron (NM_178795, intron 29 of 29)	intron (NM_178795, intron 29 of 29)	19144	NM_001173506	17754	Mm.36501	NM_032393	ENSMUSG00000027254	Map1a	6330416M19Rik|AI853608|Mtap-1|Mtap1|Mtap1a|moth1	microtubule-associated protein 1 A	protein-coding
common_peak1-14005-30-30-0.215479099104998-0.419637632935632	chr2	105903948	105905305	+	0	NA	Intergenic	Intergenic	-60920	NR_033993	99349	Mm.25661	NM_026992	ENSMUSG00000027166	Dnajc24	1700030A21Rik|2610027M02Rik|AV066965|AW240712|Dph4|MmDjC7|Zcsl3	DnaJ (Hsp40) homolog, subfamily C, member 24	protein-coding
unique_peak2-33715-3-5--0.998945590680433-0.96108193396963	chr11	113225947	113226266	+	0	NA	intron (NM_027216, intron 6 of 9)	intron (NM_027216, intron 6 of 9)	-155123	NR_040276	319871	Mm.383743	NR_040276	ENSMUSG00000085421	4732490B19Rik	-	RIKEN cDNA 4732490B19 gene	ncRNA
common_peak2-28184-10-37--1.89151216843482-3.88430425937119	chr4	115278868	115279965	+	0	NA	intron (NM_001100181, intron 4 of 12)	intron (NM_001100181, intron 4 of 12)	5873	NM_001100181	100040843	Mm.482683	NM_001100181	ENSMUSG00000063929	Cyp4a32	OTTMUSG00000008689	cytochrome P450, family 4, subfamily a, polypeptide 32	protein-coding
common_peak2-22132-19-28--0.455293668465885-0.518921928796332	chr12	85338756	85339619	+	0	NA	Intergenic	Intergenic	10376	NM_134188	171210	Mm.371675	NM_134188	ENSMUSG00000021226	Acot2	AA571646|MTE-I|Mte1	acyl-CoA thioesterase 2	protein-coding
unique_peak2-36596-2-6--1.72480917832092-1.26211192963361	chr2	176635942	176636314	+	0	NA	intron (NR_040256, intron 2 of 4)	MTA_Mm|LTR|MaLR	13014	NR_040256	626877	Mm.490744	NR_040256		Gm14405	OTTMUSG00000016573	predicted gene 14405	pseudo
common_peak2-29523-20-34--0.641208232353773-0.863762398024911	chr6	35252515	35253282	+	0	NA	intron (NM_172892, intron 1 of 15)	intron (NM_172892, intron 1 of 15)	5228	NM_172892	243755	Mm.23666	NM_172892	ENSMUSG00000029843	Slc13a4	9630060C05Rik|SUT-1|SUT1	solute carrier family 13 (sodium/sulfate symporters), member 4	protein-coding
common_peak2-31647-32-58--0.603551030142182-1.11442465192823	chr8	124948366	124949986	+	0	NA	intron (NM_001301284, intron 4 of 4)	B2_Mm2|SINE|B2	3191	NM_145834	234836	Mm.222808	NM_145834	ENSMUSG00000046108	Il17c	IL-17C	interleukin 17C	protein-coding
unique_peak2-34524-10-13--0.450939577048835-0.386243247519795	chr14	54259230	54259973	+	0	NA	Intergenic	MTD-int|LTR|MaLR	-26014	NM_001205242	100568452	Mm.213248	NM_001205242		A430107P09Rik	Va10	RIKEN cDNA A430107P09 gene	protein-coding
common_peak2-32162-22-50--1.02514123688409-2.14568534968695	chr9	109930934	109932630	+	0	NA	intron (NM_001205332, intron 5 of 17)	PB1D10|SINE|Alu	71809	NM_001252683	72831	Mm.276305	NM_133347	ENSMUSG00000032480	Dhx30	2810477H02Rik|C130058C04Rik|Ddx30|HELG|Ret-CoR	DEAH (Asp-Glu-Ala-His) box polypeptide 30	protein-coding
common_peak1-15359-7-6--0.00826409175941478-0.97990265578305	chr4	57812833	57813308	+	0	NA	Intergenic	Intergenic	-45050	NM_009649	11641	Mm.467752	NM_009649	ENSMUSG00000038729	Akap2	AA959716|AI649048|Akap-2|Akap-kl|B230340M18Rik|Prka2	A kinase (PRKA) anchor protein 2	protein-coding
common_peak2-31166-33-31-0.331337562525529-0.549429090733244	chr8	45975180	45975793	+	0	NA	Intergenic	RMER17B|LTR|ERVK	-60076	NM_001081286	14107	Mm.27365	NM_001081286	ENSMUSG00000070047	Fat1	2310038E12Rik|AU023433|Fath|mFat1	FAT tumor suppressor homolog 1 (Drosophila)	protein-coding
common_peak1-15334-19-33--0.684775514588653-0.884951936461256	chr4	47353148	47353937	+	0	NA	Intergenic	L1Md_F3|LINE|L1	-12635	NM_009370	21812	Mm.197552	NM_009370	ENSMUSG00000007613	Tgfbr1	ALK5|AU017191|Alk-5|TbetaR-I|TbetaRI	transforming growth factor, beta receptor I	protein-coding
common_peak2-22161-14-29--1.00767443525087-1.28534286439185	chr12	87407347	87408027	+	0	NA	intron (NM_009368, intron 3 of 6)	intron (NM_009368, intron 3 of 6)	12304	NM_009368	21809	Mm.3992	NM_009368	ENSMUSG00000021253	Tgfb3	Tgfb-3	transforming growth factor, beta 3	protein-coding
common_peak1-17613-7-10--0.660340788339108-1.12966497611638	chr7	45458924	45459384	+	0	NA	Intergenic	Intergenic	1060750	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak1-9867-8-15--0.994777582052429-0.771068449301683	chr12	81484662	81485146	+	0	NA	intron (NM_177267, intron 5 of 8)	B1_Mur2|SINE|Alu	7760	NR_037207	100526530		NR_037207		Mir1843a	Mir1843|mmu-mir-1843|mmu-mir-1843a	microRNA 1843a	ncRNA
unique_peak2-35922-6-8--0.60452689106201-1.03789460276074	chr19	6004179	6004684	+	0	NA	intron (NM_001110504, intron 10 of 21)	intron (NM_001110504, intron 10 of 21)	-8189	NR_045783	100502985	Mm.465338	NR_045783	ENSMUSG00000097404	Gm10814	ENSMUSG00000075230	predicted gene 10814	ncRNA
unique_peak2-34370-7-9--0.522837264589173-1.05908390183068	chr13	109440711	109441228	+	0	NA	Intergenic	Intergenic	-3402	NM_011056	238871	Mm.434429	NM_011056		Pde4d	9630011N22Rik|Dpde3	phosphodiesterase 4D, cAMP specific	protein-coding
common_peak2-27346-17-17-0.0483713367627256-0.325169893479371	chr3	78966762	78967261	+	0	NA	Intergenic	Intergenic	-17214	NM_001099624	76089	Mm.31220	NM_001099624	ENSMUSG00000062232	Rapgef2	5830453M24Rik|CNRasGEF|Pdzgef1|RA-GEF-1|mKIAA0313|nRapGEP	Rap guanine nucleotide exchange factor (GEF) 2	protein-coding
unique_peak1-2374-9-3-1.18961340640422-1.57096726280955	chr15	95380425	95380941	+	0	NA	Intergenic	Intergenic	-22000	NM_001289653	54003	Mm.3959	NM_016743	ENSMUSG00000022454	Nell2	A330108N19Rik|R75516|mel91	NEL-like 2	protein-coding
unique_peak2-33817-7-24--1.84476535947653-2.44150343356329	chr12	78954425	78955133	+	0	NA	Intergenic	Intergenic	-372863	NM_172952	268566	Mm.341742	NM_145965	ENSMUSG00000047454	Gphn	5730552E08Rik|AI662856|BC027112|C230040D23|GPH|GPHRYN|geph	gephyrin	protein-coding
common_peak2-31887-37-39-0.204064976598456-0.426350872773373	chr9	56107835	56108973	+	0	NA	exon (NM_172924, exon 4 of 7)	exon (NM_172924, exon 4 of 7)	-99527	NM_019793	56434	Mm.28484	NM_019793	ENSMUSG00000032324	Tspan3	1700055K04Rik|TM4-A|Tm4sf8	tetraspanin 3	protein-coding
common_peak1-11590-34-34-0.2527855100563-0.484230028934922	chr16	16870665	16871593	+	0	NA	5' UTR (NM_011624, exon 1 of 18)	5' UTR (NM_011624, exon 1 of 18)	145	NM_011624	21976	Mm.326089	NM_011624	ENSMUSG00000022779	Top3b	-	topoisomerase (DNA) III beta	protein-coding
unique_peak2-34072-9-8-0.0196884049619079-1.03275496310833	chr13	3359568	3360003	+	0	NA	Intergenic	CpG	-117764	NR_015522	76937	Mm.487240	NR_015522	ENSMUSG00000097709	2810429I04Rik	AI256682	RIKEN cDNA 2810429I04 gene	ncRNA
common_peak2-21354-9-13--0.617741515653384-0.459837087125828	chr11	77835857	77836723	+	0	NA	intron (NM_174852, intron 8 of 14)	intron (NM_174852, intron 8 of 14)	-9525	NM_183286	70451	Mm.390342	NM_183286	ENSMUSG00000020834	Dhrs13	2610209N15Rik	dehydrogenase/reductase (SDR family) member 13	protein-coding
unique_peak1-5864-7-3-0.799090830298189-1.23214870625617	chr6	84385760	84386277	+	0	NA	Intergenic	Intergenic	-12186	NR_046063	100038556	Mm.387783	NR_046063		Gm10445	ENSMUSG00000072956	predicted gene 10445	ncRNA
unique_peak1-2936-11-9-0.186765489364251-0.344532117358383	chr17	56717794	56718384	+	0	NA	exon (NM_001029979, exon 4 of 21)	exon (NM_001029979, exon 4 of 21)	5917	NM_001029979	224902	Mm.214973	NM_001029979	ENSMUSG00000042625	Safb2	AA389433|AI255170|mKIAA0138	scaffold attachment factor B2	protein-coding
common_peak1-17189-42-36-0.532875962238234-1.0880568139457	chr6	124662174	124663754	+	0	NA	promoter-TSS (NM_013536)	promoter-TSS (NM_013536)	657	NM_007531	12034	Mm.36241	NM_007531	ENSMUSG00000004264	Phb2	AU044498|BAP|Bap37|Bcap37|REA	prohibitin 2	protein-coding
common_peak1-8645-40-34-0.529692665806132-1.04433310181892	chr10	126935011	126936220	+	0	NA	exon (NM_001168292, exon 26 of 26)	exon (NM_001168292, exon 26 of 26)	-3158	NM_177707	237611	Mm.32087	NM_177707	ENSMUSG00000040287	Stac3	9830125E18	SH3 and cysteine rich domain 3	protein-coding
unique_peak2-35815-4-8--1.19338551529556-1.21878474469819	chr18	64008236	64008753	+	0	NA	intron (NM_001014981, intron 20 of 27)	intron (NM_001014981, intron 20 of 27)	140145	NM_001014981	104082	Mm.30850	NM_001014981	ENSMUSG00000040560	Wdr7	AI462727|TRAG|mKIAA0541	WD repeat domain 7	protein-coding
common_peak1-9390-9-7-0.18961340640422-1.05908390183068	chr11	99199520	99200136	+	0	NA	promoter-TSS (NM_001033397)	promoter-TSS (NM_001033397)	-549	NM_001033397	320864	Mm.440509	NM_001033397	ENSMUSG00000075570	Krt26	4732407F15Rik|Krt25b	keratin 26	protein-coding
common_peak2-28661-7-6--0.00826409175941478-0.97990265578305	chr5	31568654	31568984	+	0	NA	intron (NM_026298, intron 21 of 47)	intron (NM_026298, intron 21 of 47)	14740	NM_027221	69815	Mm.389609	NM_027221	ENSMUSG00000029149	Krtcap3	2010001C09Rik|AW321088|Kcp3	keratinocyte associated protein 3	protein-coding
unique_peak2-32758-3-9--1.73591118484664-1.57096726280955	chr1	170277208	170277713	+	0	NA	intron (NM_001291508, intron 2 of 7)	B3|SINE|B2	84840	NM_001291508	18514	Mm.43358	NM_008783	ENSMUSG00000052534	Pbx1	2310056B04Rik|D230003C07Rik|Pbx-1	pre B cell leukemia homeobox 1	protein-coding
unique_peak1-1471-10-3-1.35641534500877-1.75805390616669	chr12	111447103	111447704	+	0	NA	Intergenic	RMER10A|LTR|ERVL	-51120	NR_045466	67280	Mm.390495	NR_045466		3110009F21Rik	-	RIKEN cDNA 3110009F21 gene	ncRNA
common_peak2-32422-12-27--1.15857893696997-1.38791538138627	chrX	164076126	164076674	+	0	NA	intron (NM_001290427, intron 3 of 17)	intron (NM_001290427, intron 3 of 17)	216609	NM_001290428	333605	Mm.426168	NM_001033330	ENSMUSG00000049176	Frmpd4	Gm196|PKAP1|Pdzd10|Pdzk10|Preso1|preso	FERM and PDZ domain containing 4	protein-coding
common_peak2-28158-10-16--0.73104749624157-0.604422558181019	chr4	107178382	107179006	+	0	NA	intron (NM_147221, intron 2 of 10)	intron (NM_147221, intron 2 of 10)	71370	NM_147221	230587	Mm.331757	NM_147221	ENSMUSG00000034762	Glis1	Gli5|Gli6|GliH1	GLIS family zinc finger 1	protein-coding
common_peak1-13948-15-11-0.4272022498345-0.503257505534083	chr2	91112499	91113265	+	0	NA	intron (NM_001166024, intron 11 of 16)	(TTTTC)n|Simple_repeat|Simple_repeat	7610	NM_023854	77038	Mm.43636	NM_023854	ENSMUSG00000027255	Arfgap2	2310032E02Rik|Zfp289	ADP-ribosylation factor GTPase activating protein 2	protein-coding
common_peak1-13374-21-35--0.600435736176077-0.748982406290541	chr19	46351913	46352918	+	0	NA	intron (NM_178930, intron 29 of 39)	intron (NM_178930, intron 29 of 39)	-26812	NM_001177369	18034	Mm.102365	NM_019408	ENSMUSG00000025225	Nfkb2	NF-kappaB2|lyt|p49|p49/p100|p50B|p52	nuclear factor of kappa light polypeptide gene enhancer in B cells 2, p49/p100	protein-coding
common_peak1-15480-9-8-0.0196884049619079-1.03275496310833	chr4	108327919	108328454	+	0	NA	intron (NM_183300, intron 12 of 15)	Lx3_Mus|LINE|L1	35625	NM_177045	319965	Mm.151129	NM_177045	ENSMUSG00000028582	Cc2d1b	A830039B04Rik|Freud2	coiled-coil and C2 domain containing 1B	protein-coding
unique_peak1-6120-13-6-0.971117108580164-1.01572999746118	chr6	128837417	128838038	+	0	NA	intron (NM_001289708, intron 1 of 4)	intron (NM_001289708, intron 1 of 4)	122	NM_020257	93675	Mm.391513	NM_020257	ENSMUSG00000030365	Clec2i	Clr-g|Clrg|Dcl1|LCL-1|OCILrP2	C-type lectin domain family 2, member i	protein-coding
common_peak2-24274-23-27--0.0855874175485232-0.30512735654709	chr16	95777390	95778418	+	0	NA	Intergenic	Intergenic	-25932	NM_133659	13876	Mm.164531	NM_133659	ENSMUSG00000040732	Erg	D030036I24Rik	avian erythroblastosis virus E-26 (v-ets) oncogene related	protein-coding
common_peak1-14956-19-37--0.845240186781899-1.27201509741564	chr3	104511013	104512057	+	0	NA	Intergenic	Intergenic	68930	NM_183224	329731	Mm.389494	NM_183224	ENSMUSG00000055865	Fam19a3	7530404M11Rik|TAFA3|Tafa-3	family with sequence similarity 19, member A3	protein-coding
common_peak1-13228-36-15-1.47932108616775-3.70968671820992	chr19	26749191	26750356	+	0	NA	intron (NM_011416, intron 14 of 32)	ID_B1|SINE|B4	70123	NM_011416	67155	Mm.491146	NM_011416	ENSMUSG00000024921	Smarca2	2610209L14Rik|SNF2alpha|Snf2l2|brahma|brm	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	protein-coding
common_peak2-26200-12-18--0.599151528355947-0.476916024233333	chr2	25534451	25535088	+	0	NA	intron (NM_177840, intron 2 of 6)	B3|SINE|B2	2463	NM_001276448	620709	Mm.99499	NM_177840	ENSMUSG00000045684	Lcn6	9230101D24Rik	lipocalin 6	protein-coding
unique_peak1-7-10-2-1.77145284428761-2.09384600808989	chr1	75399133	75399654	+	0	NA	intron (NM_001085370, intron 7 of 38)	intron (NM_001085370, intron 7 of 38)	2733	NM_001173477	11790	Mm.275397	NM_007463	ENSMUSG00000026207	Speg	AW125581|Apeg1|BPEG|D1Bwg1450e|SPEGalpha|SPEGbeta|mKIAA1297	SPEG complex locus	protein-coding
unique_peak1-818-10-1-2.35641534500877-2.57096726280955	chr11	5735306	5735670	+	0	NA	exon (NM_017401, exon 4 of 11)	exon (NM_017401, exon 4 of 11)	2531	NM_017401	54125	Mm.260194	NM_017401	ENSMUSG00000020474	Polm	AI462166|B230309I03Rik|Tdt-N	polymerase (DNA directed), mu	protein-coding
unique_peak1-5763-12-5-1.06381348436648-1.78669045979184	chr6	51566024	51566748	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	71864	NM_001127348	71982	Mm.294166	NM_028035	ENSMUSG00000038301	Snx10	2410004M09Rik	sorting nexin 10	protein-coding
common_peak2-23118-29-43--0.347141538022187-0.479515789778906	chr14	79586759	79587897	+	0	NA	intron (NM_027906, intron 42 of 44)	intron (NM_027906, intron 42 of 44)	59846	NM_001033215	105590	Mm.486536	NM_001033215	ENSMUSG00000071262	Zfp957	AU017455	zinc finger protein 957	protein-coding
common_peak1-7848-16-13-0.310908720210457-0.417187467413082	chr1	132133091	132133782	+	0	NA	Intergenic	MLT1F|LTR|MaLR	186140	NM_007827	13137	Mm.436759	NM_007827	ENSMUSG00000026401	Daf2	AI323748|Cd55b|Daf|Daf-TM|TM-DAF	decay accelerating factor 2	protein-coding
common_peak1-18622-64-105--0.262474052854595-0.626610071870342	chr8	109692471	109694007	+	0	NA	intron (NM_025558, intron 1 of 4)	intron (NM_025558, intron 1 of 4)	18678	NM_025558	66427	Mm.20242	NM_025558	ENSMUSG00000031924	Cyb5b	1810044O22Rik|AU015618|Cyb5m	cytochrome b5 type B	protein-coding
common_peak1-12985-30-17-0.999750408049561-1.81352036806616	chr19	4162702	4163860	+	0	NA	promoter-TSS (NM_021485)	promoter-TSS (NM_021485)	-36	NM_021485	58988	Mm.271937	NM_021485	ENSMUSG00000024830	Rps6kb2	70kDa|S6K2	ribosomal protein S6 kinase, polypeptide 2	protein-coding
common_peak1-8891-27-31--0.00845404910476422-0.304476922018591	chr11	48977774	48979016	+	0	NA	Intergenic	Intergenic	4877	NM_146276	258273	Mm.377407	NM_146276	ENSMUSG00000048378	Olfr1394	MOR280-1	olfactory receptor 1394	protein-coding
common_peak1-12642-95-184--0.383466115492298-1.47929529612245	chr18	35118164	35119588	+	0	NA	Intergenic	RMER16-int|LTR|ERVK	-4871	NM_010481	15526	Mm.209419	NM_010481	ENSMUSG00000024359	Hspa9	74kDa|Csa|Grp75|Hsc74|Hsp74|Hsp74a|Hspa9a|Mortalin|Mot-2|Mot2|Mthsp70|Pbp74	heat shock protein 9	protein-coding
common_peak2-26021-20-18-0.240147271147608-0.388034239052786	chr19	58522011	58522815	+	0	NA	intron (NR_104342, intron 4 of 11)	intron (NR_104342, intron 4 of 11)	6671	NM_001285457	14585	Mm.88367	NM_010279	ENSMUSG00000025089	Gfra1	AU042498	glial cell line derived neurotrophic factor family receptor alpha 1	protein-coding
common_peak2-29324-44-54-0.0405331210438753-0.318638672819241	chr5	146912434	146914086	+	0	NA	intron (NM_001105160, intron 9 of 12)	intron (NM_001105160, intron 9 of 12)	22426	NM_001105160	100041449	Mm.301900	NM_001105160	ENSMUSG00000061292	Cyp3a59	ENSMUSG00000061292	cytochrome P450, family 3, subfamily a, polypeptide 59	protein-coding
common_peak1-7887-93-157--0.192710884670834-0.566943354600629	chr1	134414817	134416501	+	0	NA	intron (NM_177129, intron 17 of 22)	intron (NM_177129, intron 17 of 22)	12852	NM_029025	74626	Mm.34611	NM_029025	ENSMUSG00000048174	Tmem81	4930429O20Rik|AI465369	transmembrane protein 81	protein-coding
unique_peak2-39836-2-6--1.72480917832092-1.26211192963361	chrX	51205619	51205907	+	0	NA	Intergenic	L1Md_T|LINE|L1	-104880	NM_011725	22441	Mm.379041	NM_011725	ENSMUSG00000054626	Xlr	-	X-linked lymphocyte-regulated	protein-coding
common_peak2-23585-27-28-0.133564955767664-0.358978896303361	chr15	80053642	80054652	+	0	NA	Intergenic	MTC|LTR|MaLR	-10363	NM_178719	239555	Mm.307163	NM_178719	ENSMUSG00000022412	Mief1	A230016E22|AI452372|Smcr7l	mitochondrial elongation factor 1	protein-coding
common_peak2-30305-7-5-0.214128329577033-1.01466476204226	chr7	19832237	19832601	+	0	NA	TTS (NM_207525)	TTS (NM_207525)	18681	NM_207525	403187	Mm.239583	NM_207525		Opa3	D630048P19Rik|Gm1425|Gm472	optic atrophy 3	protein-coding
unique_peak2-34879-9-7-0.18961340640422-1.05908390183068	chr15	79052035	79052415	+	0	NA	Intergenic	B1F|SINE|Alu	-7378	NM_008837	18693	Mm.259464	NM_008837	ENSMUSG00000068206	Pick1	Prkcabp	protein interacting with C kinase 1	protein-coding
common_peak1-7657-47-72--0.25498313411347-0.498810849059171	chr1	74303522	74304855	+	0	NA	intron (NM_029711, intron 6 of 9)	intron (NM_029711, intron 6 of 9)	-20986	NM_174985	227289	Mm.246587	NM_174985	ENSMUSG00000064272	Gpbar1	BG37|GPCR|GPR131|M-BAR|TGR5	G protein-coupled bile acid receptor 1	protein-coding
unique_peak1-6890-31-8-2.05531366937081-4.70100036706703	chr8	94683657	94685049	+	0	NA	Intergenic	Intergenic	195666	NR_110452	71296	Mm.86664	NR_033641	ENSMUSG00000031736	Crnde	4933436C20Rik	colorectal neoplasia differentially expressed (non-protein coding)	ncRNA
common_peak2-31525-20-18-0.240147271147608-0.388034239052786	chr8	109749835	109750363	+	0	NA	Intergenic	Intergenic	-67271	NM_018823	54446	Mm.390057	NM_018823	ENSMUSG00000003847	Nfat5	AI225870|B130038B15Rik|CAG-8|CAG80|NFATL1|OREBP|TonEBP|mKIAA0827|nfatz	nuclear factor of activated T cells 5	protein-coding
common_peak2-19547-72-76-0.401797272177417-1.12865934592523	chr1	171294020	171295145	+	0	NA	Intergenic	Intergenic	167013	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
common_peak2-27632-31-22-0.70167671475611-1.13829382151971	chr3	106482197	106483002	+	0	NA	Intergenic	Lx2|LINE|L1	-5306	NM_001039478	321000	Mm.259638	NM_028081	ENSMUSG00000056260	Lrif1	2010012G17Rik|4933421E11Rik|AI450568	ligand dependent nuclear receptor interacting factor 1	protein-coding
common_peak2-25607-9-13--0.617741515653384-0.459837087125828	chr19	8920208	8920684	+	0	NA	intron (NM_001290823, intron 4 of 10)	intron (NM_001290823, intron 4 of 10)	-4829	NM_001013019	68852	Mm.265792	NM_001013019	ENSMUSG00000071656	Lrrn4cl	1110067I12Rik	LRRN4 C-terminal like	protein-coding
unique_peak2-39504-7-10--0.660340788339108-1.12966497611638	chr9	63074357	63074824	+	0	NA	intron (NM_011840, intron 17 of 21)	B1_Mus2|SINE|Alu	-77822	NM_001163758	207667	Mm.36349	NM_172446	ENSMUSG00000022245	Skor1	AV273001|C230094B15Rik|Corl1|Lbxcor1	SKI family transcriptional corepressor 1	protein-coding
unique_peak2-32480-6-16--1.52206473087004-1.32521814697968	chr1	36068208	36068959	+	0	NA	Intergenic	L1MA4|LINE|L1	-56662	NM_015818	50785	Mm.213566	NM_015818	ENSMUSG00000045216	Hs6st1	6Ost1	heparan sulfate 6-O-sulfotransferase 1	protein-coding
common_peak2-24815-54-52-0.445165307066535-1.00457410994136	chr17	70753086	70754936	+	0	NA	Intergenic	Intergenic	-20121	NM_177639	224997	Mm.311840	NM_027712	ENSMUSG00000003279	Dlgap1	4933422O14Rik|9630002F18|AI845682|AI848168|BB075781|D17Bwg0511e|GKAP/SAPAP|GKPA/SAPAP|Gkap|Sapap1|mKIAA4162	discs, large (Drosophila) homolog-associated protein 1	protein-coding
common_peak1-19495-9-24--1.4542427833705-1.83731222263754	chrX	159372171	159372658	+	0	NA	intron (NM_018737, intron 10 of 18)	intron (NM_018737, intron 10 of 18)	30117	NM_009789	12309	Mm.6891	NM_009789	ENSMUSG00000040808	S100g	AU042539|CABP1|CaBP-D9K|Cabp9k|Calb3	S100 calcium binding protein G	protein-coding
unique_peak1-6308-8-3-1.00522241794757-1.39487600375387	chr7	40677402	40677906	+	0	NA	Intergenic	Intergenic	-1364442	NM_001013810	434171	Mm.60990	NM_001013810	ENSMUSG00000060565	Gm5591	EG434171	predicted gene 5591	protein-coding
unique_peak1-3721-9-1-2.18961340640422-2.31132995230379	chr19	46216013	46216447	+	0	NA	intron (NM_008852, intron 1 of 3)	ID_B1|SINE|B4	6585	NM_008852	18742	Mm.6255	NM_008852	ENSMUSG00000025229	Pitx3	Ptx3|ak	paired-like homeodomain transcription factor 3	protein-coding
unique_peak1-3389-38-11-1.98649015857737-5.73642998372103	chr19	4073602	4075110	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	-8132	NM_001160253	29866	Mm.46268	NM_013878	ENSMUSG00000024857	Cabp2	-	calcium binding protein 2	protein-coding
common_peak2-22345-7-15--1.20090916970181-0.947446088118041	chr13	23746719	23747290	+	0	NA	Intergenic	Intergenic	28824	NM_178189	319164	Mm.261973	NM_178189	ENSMUSG00000069270	Hist1h2ac	-	histone cluster 1, H2ac	protein-coding
common_peak2-30287-21-19-0.247561170378873-0.427564438475253	chr7	19094349	19095125	+	0	NA	Intergenic	Intergenic	22839	NM_054060	114868	Mm.389809	NM_054060	ENSMUSG00000070798	Psg25	cea13	pregnancy-specific glycoprotein 25	protein-coding
common_peak2-20200-18-22--0.210642804828661-0.321718508207525	chr1	176818367	176819102	+	0	NA	intron (NM_011825, intron 1 of 1)	intron (NM_011825, intron 1 of 1)	33216	NM_011825	23893	Mm.25760	NM_011825	ENSMUSG00000050069	Grem2	Gremlin2|Prdc	gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis)	protein-coding
common_peak1-12113-13-5-1.19350952991661-1.95509489018123	chr17	26598458	26599266	+	0	NA	Intergenic	Intergenic	46555	NM_013642	19252	Mm.239041	NM_013642	ENSMUSG00000024190	Dusp1	3CH134|MKP1|Ptpn16|U19515|erp|mkp-1	dual specificity phosphatase 1	protein-coding
unique_peak2-37170-2-6--1.72480917832092-1.26211192963361	chr4	46024077	46024561	+	0	NA	intron (NM_146142, intron 9 of 16)	intron (NM_146142, intron 9 of 16)	-27775	NM_021883	21916	Mm.249594	NM_021883	ENSMUSG00000028328	Tmod1	E-Tmod|Tmod	tropomodulin 1	protein-coding
common_peak2-20182-8-6-0.197867495889966-1.03789460276074	chr1	172216849	172217232	+	0	NA	Intergenic	RMER10A|LTR|ERVL	9585	NM_012009	26904	Mm.57009	NM_012009	ENSMUSG00000096334	Sh2d1b1	EAT-2|EAT-2A|Eat2|Eat2a|Sh2d1b	SH2 domain protein 1B1	protein-coding
common_peak2-30890-12-12--0.0516637330534535-0.309718203022949	chr7	141562234	141562865	+	0	NA	intron (NM_001081331, intron 1 of 7)	L1MB7|LINE|L1	5962	NM_001081331	71007	Mm.334285	NM_001081331	ENSMUSG00000030994	D7Ertd443e	4933400E14Rik|FATS|Gm497	DNA segment, Chr 7, ERATO Doi 443, expressed	protein-coding
common_peak1-17112-37-70--0.623754048018863-1.38710580071366	chr6	113697068	113698276	+	0	NA	3' UTR (NM_009723, exon 22 of 22)	3' UTR (NM_009723, exon 22 of 22)	-6997	NM_024206	110379	Mm.29296	NM_024206	ENSMUSG00000030298	Sec13	1110003H02Rik|Sec13l1|Sec13r	SEC13 homolog (S. cerevisiae)	protein-coding
common_peak2-24221-28-33--0.0345037214288766-0.301029995664001	chr16	84702763	84703728	+	0	NA	Intergenic	GC_rich|Low_complexity|Low_complexity	-11140	NR_029565	387173		NR_029565	miRBase:MI0000177	Mir155	Mirn155|mmu-mir-155	microRNA 155	ncRNA
unique_peak2-36214-6-7--0.434601889619698-0.97990265578305	chr2	35109475	35109894	+	0	NA	Intergenic	MTC|LTR|MaLR	-2195	NM_001206367	227753	Mm.21109	NM_146120	ENSMUSG00000026879	Gsn	ADF	gelsolin	protein-coding
common_peak2-26536-13-11-0.193509529916613-0.379391706698377	chr2	92183411	92183847	+	0	NA	intron (NM_138755, intron 9 of 17)	intron (NM_138755, intron 9 of 17)	27585	NM_001290774	228366	Mm.31158	NM_172670	ENSMUSG00000040434	Gyltl1b	5730485C17Rik|AI891893|Large2|Largel|mKIAA4105	glycosyltransferase-like 1B	protein-coding
common_peak1-8841-18-31--0.687080848771648-0.820293215674341	chr11	29373213	29374072	+	0	NA	intron (NM_176841, intron 17 of 31)	ID4|SINE|ID	41391	NM_026465	67939	Mm.251087	NM_026465	ENSMUSG00000032673	Prorsd1	2010316F05Rik|Ncrna00117|Prdxdd1	prolyl-tRNA synthetase domain containing 1	protein-coding
common_peak1-9313-10-10--0.103016273628528-0.301029995663987	chr11	94342619	94343130	+	0	NA	intron (NM_144827, intron 13 of 15)	intron (NM_144827, intron 13 of 15)	3750	NM_144827	217116	Mm.156123	NM_144827	ENSMUSG00000020867	Spata20	Tisp78	spermatogenesis associated 20	protein-coding
common_peak2-29997-11-17--0.661231417190699-0.58239619684445	chr6	124484283	124484919	+	0	NA	intron (NM_144938, intron 7 of 11)	intron (NM_144938, intron 7 of 11)	7738	NM_144938	50908	Mm.219527	NM_144938	ENSMUSG00000038521	C1s1	AA959438|AI255193|AI327365|C1s|C1sa	complement component 1, s subcomponent 1	protein-coding
common_peak2-28642-17-13-0.410941416147434-0.546772548767014	chr5	29860945	29861513	+	0	NA	Intergenic	MYSERV16_I-int|LTR|ERVK	-3260	NR_102704	619355	Mm.426744	NR_102704		Gm6083	ENSMUSG00000078182	developmental pluripotency associated 5 pseudogene	pseudo
unique_peak1-51-9-1-2.18961340640422-2.31132995230379	chr1	29484999	29485259	+	0	NA	Intergenic	Intergenic	6796	NR_105760	102465174		NR_105760	miRBase:MI0021870	Mir6342	mmu-mir-6342	microRNA mir-6342	ncRNA
unique_peak2-37513-8-6-0.197867495889966-1.03789460276074	chr5	17575907	17576290	+	0	NA	Intergenic	Lx3A|LINE|L1	107710	NM_001081143	242851	Mm.332230	NM_001081143	ENSMUSG00000028777	Gnat3	Ggust|Gtn	guanine nucleotide binding protein, alpha transducing 3	protein-coding
common_peak1-14576-10-3-1.35641534500877-1.75805390616669	chr3	38433842	38434481	+	0	NA	Intergenic	Intergenic	-50423	NM_001167883	99696	Mm.290937	NM_001033198	ENSMUSG00000044864	Ankrd50	AI662170|E430012K20Rik|mKIAA1223|mKIAA3019	ankyrin repeat domain 50	protein-coding
common_peak1-13875-28-34--0.0763238971235038-0.304271119602326	chr2	71644258	71645452	+	0	NA	intron (NM_001277970, intron 1 of 24)	intron (NM_001277970, intron 1 of 24)	19859	NM_001277970	16403	Mm.225096	NM_008397		Itga6	5033401O05Rik|AI115430|Cd49f|VLA-6	integrin alpha 6	protein-coding
common_peak2-19568-29-17-0.942365079172799-1.68242911687175	chr1	10285098	10285925	+	0	NA	Intergenic	B4|SINE|B4	-62760	NM_001102430	211673	Mm.229141	NM_001102430	ENSMUSG00000067851	Arfgef1	ARFGEP1|BIG1|D130059B05Rik|D730028O18Rik|P200	ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited)	protein-coding
unique_peak2-32980-4-12--1.72390023199434-1.85743853830261	chr10	59323338	59323815	+	0	NA	intron (NM_001291442, intron 11 of 12)	intron (NM_001291442, intron 11 of 12)	-18763	NM_019965	56709	Mm.103610	NM_019965	ENSMUSG00000020109	Dnajb12	Dj10|mDj10	DnaJ (Hsp40) homolog, subfamily B, member 12	protein-coding
common_peak2-26459-13-16--0.30899081061257-0.330004445983672	chr2	74578261	74579055	+	0	NA	intron (NM_010468, intron 1 of 2)	CpG	-12083	NR_110447	102634401	Mm.235021	NR_110447		LOC102634401	-	uncharacterized LOC102634401	ncRNA
common_peak1-12087-17-19--0.103631756682325-0.301029995663974	chr17	24707106	24707928	+	0	NA	intron (NM_013630, intron 11 of 45)	intron (NM_013630, intron 11 of 45)	20622	NM_013630	18763	Mm.30435	NM_013630	ENSMUSG00000032855	Pkd1	PC1|mFLJ00285	polycystic kidney disease 1 homolog	protein-coding
common_peak1-11262-38-39-0.249524564411168-0.503563708672202	chr15	80710658	80712214	+	0	NA	exon (NM_144812, exon 8 of 25)	exon (NM_144812, exon 8 of 25)	-59033	NR_039573	100628612		NR_039573	miRBase:MI0018022	Mir5113	mmu-mir-5113|mu-mir-5113	microRNA 5113	ncRNA
common_peak1-15077-18-27--0.494435770829252-0.528262014464654	chr3	126921707	126922305	+	0	NA	Intergenic	Intergenic	57783	NR_105029	100862268	Mm.444603	NR_105029	ENSMUSG00000097456	LOC100862268	-	uncharacterized LOC100862268	ncRNA
unique_peak1-1282-8-1-2.00522241794757-2.05605744720049	chr11	118372222	118372713	+	0	NA	intron (NM_001285438, intron 4 of 13)	intron (NM_001285438, intron 4 of 13)	34193	NM_172573	217364	Mm.473963	NM_172573	ENSMUSG00000033857	Engase	C130099A03|D230014K01Rik	endo-beta-N-acetylglucosaminidase	protein-coding
unique_peak1-3329-13-2-2.19350952991661-3.03832868024006	chr18	84681808	84682436	+	0	NA	intron (NM_001033341, intron 3 of 8)	L1_Mus1|LINE|L1	76774	NM_001033341	240476	Mm.329575	NM_001033341	ENSMUSG00000048410	Zfp407	6430585N13Rik|Gm333|Gm334|Gm948|ZNF407	zinc finger protein 407	protein-coding
common_peak1-11658-22-19-0.325356010200042-0.479250674391597	chr16	24434502	24435531	+	0	NA	intron (NM_178665, intron 1 of 12)	intron (NM_178665, intron 1 of 12)	-13161	NM_001145952	210126	Mm.209385	NM_178665	ENSMUSG00000033306	Lpp	9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16	LIM domain containing preferred translocation partner in lipoma	protein-coding
common_peak1-7878-12-12--0.0516637330534535-0.309718203022949	chr1	134079305	134079803	+	0	NA	Intergenic	Intergenic	-8459	NM_001033250	213409	Mm.426321	NM_001033250	ENSMUSG00000079330	Lemd1	4930540I23Rik|6430514M23Rik|AI428128|LEMP-1	LEM domain containing 1	protein-coding
unique_peak1-4383-8-2-1.42025991722641-1.65811743852845	chr2	163363608	163364089	+	0	NA	intron (NR_027970, intron 1 of 3)	intron (NR_027970, intron 1 of 3)	3609	NR_027970	68314	Mm.46190	NM_197983	ENSMUSG00000046840	Hnf4aos	0610008F07Rik	hepatic nuclear factor 4 alpha, opposite strand	ncRNA
common_peak2-25324-7-17--1.37083417114412-1.23399803405144	chr18	75682175	75682882	+	0	NA	TTS (NR_045879)	TTS (NR_045879)	8229	NR_045879	100038353	Mm.440724	NR_045879	ENSMUSG00000097712	Gm10532	ENSMUSG00000073534	predicted gene 10532	ncRNA
common_peak2-21715-10-18--0.891512168434816-0.804350088532826	chr11	109361910	109362630	+	0	NA	intron (NM_028710, intron 4 of 13)	A-rich|Low_complexity|Low_complexity	-27360	NM_001029842	104681	Mm.265874	NM_134038	ENSMUSG00000041920	Slc16a6	AW743111|ESTM12|MCT 6|MCT 7|MCT6	solute carrier family 16 (monocarboxylic acid transporters), member 6	protein-coding
common_peak1-18726-26-40--0.429652912459622-0.612304185853036	chr8	123253730	123254770	+	0	NA	Intergenic	ORR1C2|LTR|MaLR	-6026	NM_008320	15900	Mm.334861	NM_008320	ENSMUSG00000041515	Irf8	AI893568|ICSBP|IRF-8|Icsbp1|Myls	interferon regulatory factor 8	protein-coding
unique_peak2-37662-4-8--1.19338551529556-1.21878474469819	chr5	92813614	92813989	+	0	NA	intron (NM_181728, intron 2 of 9)	intron (NM_181728, intron 2 of 9)	-21479	NR_038116	56066	Mm.131723	NM_019494	ENSMUSG00000060183	Cxcl11	Cxc11|H174|I-tac|Ip9|Itac|Scyb11|Scyb9b|b-R1|betaR1	chemokine (C-X-C motif) ligand 11	protein-coding
common_peak2-27909-36-45--0.0442408698892587-0.301029995663982	chr4	6365319	6366175	+	0	NA	intron (NM_010945, intron 2 of 30)	(CAAA)n|Simple_repeat|Simple_repeat	15671	NM_010945	18201	Mm.3059	NM_010945	ENSMUSG00000028245	Nsmaf	AA959567|C630007J05|Fan	neutral sphingomyelinase (N-SMase) activation associated factor	protein-coding
common_peak2-23262-10-7-0.356415345008769-1.12966497611638	chr15	25621261	25621789	+	0	NA	intron (NM_019472, intron 2 of 40)	B3A|SINE|B2	69220	NM_019472	17909	Mm.60590	NM_019472	ENSMUSG00000022272	Myo10	AW048724|D15Ertd600e|mKIAA0799	myosin X	protein-coding
unique_peak2-33378-0-5--3.42509343119537-1.32905871926422	chr11	44519767	44520217	+	0	NA	intron (NM_001290710, intron 6 of 14)	intron (NM_001290710, intron 6 of 14)	88390	NM_001290710	13591	Mm.439662	NM_007897		Ebf1	Ebf|O/E-1|OE-1|Olf-1|Olf1	early B cell factor 1	protein-coding
unique_peak1-4009-10-1-2.35641534500877-2.57096726280955	chr2	35697812	35698333	+	0	NA	intron (NM_029774, intron 6 of 9)	B4A|SINE|B4	23362	NR_040618	77665	Mm.400558	NR_040618	ENSMUSG00000086449	9030204H09Rik	-	RIKEN cDNA 9030204H09 gene	ncRNA
common_peak2-30620-83-157--0.389558123070977-1.31619076156571	chr7	90442339	90444348	+	0	NA	Intergenic	Intergenic	-290098	NM_177695	233424	Mm.486619	NM_177695		Tmc3	9030203A06	transmembrane channel-like gene family 3	protein-coding
common_peak2-27476-33-42--0.0949271921765691-0.311623594475992	chr3	92245360	92246507	+	0	NA	Intergenic	Lx7|LINE|L1	-3232	NM_009265	20754	Mm.140151	NM_009265	ENSMUSG00000048455	Sprr1b	-	small proline-rich protein 1B	protein-coding
unique_peak1-2853-7-4-0.477162735410827-1.09384600808989	chr17	31897952	31898392	+	0	NA	Intergenic	Intergenic	83296	NM_001278570	12954	Mm.1228	NM_013501	ENSMUSG00000024041	Cryaa	Acry-1|Crya-1|Crya1|DAcry-1|lop18	crystallin, alpha A	protein-coding
unique_peak2-35255-17-31--0.781703661794962-0.932560489028298	chr17	6601564	6602865	+	0	NA	intron (NM_001199948, intron 1 of 5)	intron (NM_001199948, intron 1 of 5)	1310	NM_001166630	100040563	Mm.457381	NM_001166630		Dynlt1c	100040603|Dynlt1d	dynein light chain Tctex-type 1C	protein-coding
unique_peak2-34310-4-5--0.608423014574403-0.909929411522249	chr13	92609663	92610131	+	0	NA	intron (NM_009027, intron 9 of 23)	intron (NM_009027, intron 9 of 23)	291552	NM_009027	19418	Mm.248630	NM_009027		Rasgrf2	6330417G04Rik|AW048350|Grf2|Ras-GRF2	RAS protein-specific guanine nucleotide-releasing factor 2	protein-coding
common_peak1-8289-29-34--0.0169929363298555-0.304177167304369	chr10	30617491	30618770	+	0	NA	Intergenic	ORR1E|LTR|MaLR	-55541	NM_013904	15214	Mm.103573	NM_013904	ENSMUSG00000019789	Hey2	CHF1|Herp1|Hrt2|bHLHb32|hesr2	hairy/enhancer-of-split related with YRPW motif 2	protein-coding
common_peak1-17202-13-20--0.613845392140992-0.532159081577619	chr6	125039849	125040591	+	0	NA	Intergenic	Intergenic	-5961	NM_145979	107932	Mm.333388	NM_145979	ENSMUSG00000063870	Chd4	9530019N15Rik|AA617397|BC005710|D6Ertd380e|Mi-2beta|mKIAA4075	chromodomain helicase DNA binding protein 4	protein-coding
common_peak2-19578-39-48-0.00105140280394522-0.303268666669768	chr1	15805548	15806337	+	0	NA	intron (NM_001286628, intron 3 of 8)	intron (NM_001286628, intron 3 of 8)	10215	NM_001286628	21749	Mm.4306	NM_009352		Terf1	Pin2|Trbf1|Trf1	telomeric repeat binding factor 1	protein-coding
common_peak1-16486-32-35-0.109167017777348-0.348003640999429	chr5	138154935	138155979	+	0	NA	Intergenic	PB1D10|SINE|Alu	25769	NM_175521	243300	Mm.74750	NM_175521	ENSMUSG00000045348	Nyap1	6430598A04Rik	neuronal tyrosine-phosphorylated phosphoinositide 3-kinase adaptor 1	protein-coding
common_peak1-8237-25-50--0.810575436626389-1.52790159704429	chr10	13966780	13967742	+	0	NA	Intergenic	L1Md_F2|LINE|L1	281076	NM_010437	15273	Mm.42157	NM_010437	ENSMUSG00000015501	Hivep2	MIBP1|Schnurri-2|Shn-2	human immunodeficiency virus type I enhancer binding protein 2	protein-coding
common_peak2-22866-74-131--0.328507542379846-0.924292404666925	chr14	29967488	29969211	+	0	NA	intron (NM_009785, intron 13 of 37)	intron (NM_009785, intron 13 of 37)	136955	NM_176920	319476	Mm.95780	NM_176920	ENSMUSG00000045776	Lrtm1	A930016D02Rik	leucine-rich repeats and transmembrane domains 1	protein-coding
unique_peak1-6422-9-6-0.382258484346616-1.11707584880836	chr7	89559000	89559549	+	0	NA	intron (NM_001190374, intron 3 of 29)	intron (NM_001190374, intron 3 of 29)	75070	NM_001190374	269959	Mm.65306	NM_001190374	ENSMUSG00000070469	Adamtsl3	9230119C12Rik|C130057K09|mKIAA1233	ADAMTS-like 3	protein-coding
unique_peak2-39519-4-9--1.34538860874061-1.36011389749466	chr9	65101212	65101710	+	0	NA	Intergenic	MLT1G3|LTR|MaLR	-11526	NM_173385	214425	Mm.138455	NM_173385	ENSMUSG00000042254	Cilp	9830114D16|C130036G17Rik	cartilage intermediate layer protein, nucleotide pyrophosphohydrolase	protein-coding
common_peak2-26192-13-17--0.391452970804544-0.364171515310935	chr2	25272431	25272989	+	0	NA	Intergenic	Intergenic	-6052	NM_001289453	14347	Mm.1203	NM_013524	ENSMUSG00000036587	Fut7	AI853193|FTVII|Fuc-TVII|FucT-VII	fucosyltransferase 7	protein-coding
common_peak1-10600-23-14-0.814876908900562-1.09492971584134	chr14	31493950	31495050	+	0	NA	intron (NM_177815, intron 10 of 12)	intron (NM_177815, intron 10 of 12)	26939	NM_177815	328370	Mm.259657	NM_177815	ENSMUSG00000052395	Rft1	D930025H04	RFT1 homolog (S. cerevisiae)	protein-coding
common_peak1-10875-13-8-0.608547029195456-0.660903317613904	chr15	62209852	62210430	+	0	NA	Intergenic	Intergenic	-159135	NR_003523	67552	Mm.484027	NM_026230		H2afy3	4933432H23Rik	H2A histone family, member Y3	pseudo
unique_peak1-5355-10-0-3.35641534500877-3.31132995230379	chr5	92367284	92367819	+	0	NA	Intergenic	Intergenic	24031	NR_073442	68098	Mm.159453	NM_026557	ENSMUSG00000029397	Rchy1	ARNIP|CHIMP|Pirh2|Zfp363|Znf363	ring finger and CHY zinc finger domain containing 1	protein-coding
common_peak2-21255-11-7-0.508693584251613-1.21681515183528	chr11	69409714	69410241	+	0	NA	Intergenic	Intergenic	9485	NM_013415	11932	Mm.235204	NM_013415	ENSMUSG00000041329	Atp1b2	Amog|Atpb-2	ATPase, Na+/K+ transporting, beta 2 polypeptide	protein-coding
common_peak1-16162-13-17--0.391452970804544-0.364171515310935	chr5	81020078	81020606	+	0	NA	Intergenic	Intergenic	-430276	NM_198702	319387	Mm.273631	NM_198702	ENSMUSG00000037605	Lphn3	5430402I23Rik|CIRL-3|D130075K09Rik|Gm1379|LEC3|mKIAA0768	latrophilin 3	protein-coding
common_peak2-21677-4-12--1.72390023199434-1.85743853830261	chr11	103387565	103388097	+	0	NA	Intergenic	Intergenic	88222	NM_001033434	380730	Mm.380214	NM_001033434	ENSMUSG00000034239	Gm884	LRRC37	predicted gene 884	protein-coding
unique_peak1-2575-11-1-2.50869358425161-2.83420869758413	chr16	29656169	29656682	+	0	NA	Intergenic	Intergenic	77005	NM_001199177	74143	Mm.274285	NM_133752	ENSMUSG00000038084	Opa1	1200011N24Rik|AI225888|AI847218|lilr3|mKIAA0567	optic atrophy 1	protein-coding
common_peak1-17018-14-9-0.577288065470282-0.630231561310125	chr6	91076486	91077063	+	0	NA	Intergenic	L1MB7|LINE|L1	-9954	NM_018815	54563	Mm.28162	NM_018815	ENSMUSG00000030091	Nup210	9830001L10|AI836801|Pom210|gp190|gp210	nucleoporin 210	protein-coding
common_peak1-18752-13-13--0.0288828914198356-0.309074325783021	chr8	126550698	126551204	+	0	NA	intron (NM_001029876, intron 2 of 8)	intron (NM_001029876, intron 2 of 8)	3578	NM_001029876	382038	Mm.334891	NM_001029876	ENSMUSG00000031976	Urb2	C77575|mKIAA0133	URB2 ribosome biogenesis 2 homolog (S. cerevisiae)	protein-coding
unique_peak2-39600-14-58--1.9834268890042-6.17384340282693	chr9	77916671	77918193	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	17667	NM_008103	14531	Mm.1400	NM_008103	ENSMUSG00000023333	Gcm1	GCMa|Gcm-rs2|Gcm1-rs1|glide	glial cells missing homolog 1 (Drosophila)	protein-coding
common_peak1-9007-10-31--1.64358465499123-2.75133420124051	chr11	60352091	60352699	+	0	NA	exon (NM_172943, exon 1 of 4)	exon (NM_172943, exon 1 of 4)	1210	NM_172943	268420	Mm.262056	NM_172943	ENSMUSG00000042650	Alkbh5	AW050020|AW215868|Abh5|E130207K11|Ofoxd	alkB, alkylation repair homolog 5 (E. coli)	protein-coding
common_peak1-8109-23-9-1.39983940962172-2.17218792383888	chr1	183220872	183221646	+	0	NA	Intergenic	Intergenic	-61500	NM_028408	72978	Mm.338083	NM_028408	ENSMUSG00000026514	Cnih3	2900075G08Rik|CNIH-3	cornichon homolog 3 (Drosophila)	protein-coding
common_peak1-15147-18-11-0.727956650507195-0.876666802405043	chr3	145614576	145615350	+	0	NA	Intergenic	Intergenic	13967	NM_025555	66421	Mm.25137	NM_025555		2410004B18Rik	4930572C24Rik	RIKEN cDNA 2410004B18 gene	protein-coding
common_peak1-9388-11-11--0.0762689164695427-0.301029995663976	chr11	99126312	99126843	+	0	NA	Intergenic	Intergenic	19975	NM_029393	75706	Mm.46378	NM_029393	ENSMUSG00000020913	Krt24	2310058N18Rik|2310075C18Rik	keratin 24	protein-coding
common_peak2-29744-25-20-0.469532482566345-0.662033714151238	chr6	86371283	86372070	+	0	NA	intron (NM_011585, intron 6 of 12)	intron (NM_011585, intron 6 of 12)	-16716	NM_146170	232196	Mm.404040	NM_146170	ENSMUSG00000046679	C87436	-	expressed sequence C87436	protein-coding
unique_peak1-6561-16-7-1.11826364226806-1.23399803405144	chr7	130834311	130834735	+	0	NA	Intergenic	Intergenic	-190560	NM_001081329	210162	Mm.135397	NM_175435	ENSMUSG00000030757	Zkscan2	9430065N20Rik|AW493225|Zfp694	zinc finger with KRAB and SCAN domains 2	protein-coding
common_peak2-28664-38-31-0.57145265929853-1.10165134406427	chr5	31602238	31603084	+	0	NA	intron (NM_144909, intron 5 of 18)	B2_Mm2|SINE|B2	2707	NM_144909	231103	Mm.100043	NM_144909	ENSMUSG00000059434	Gckr	GKRP	glucokinase regulatory protein	protein-coding
common_peak2-27787-33-98--1.29801905755408-5.76241054490575	chr3	137867251	137868385	+	0	NA	Intergenic	Intergenic	-12919	NM_009626	11529	Mm.8473	NM_009626		Adh7	AI325182|Adh-3|Adh-3e|Adh-3t|Adh3|Adh3-e|Adh3-t|Adh4|Adt-1	alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide	protein-coding
unique_peak2-38522-4-5--0.608423014574403-0.909929411522249	chr7	45664884	45665290	+	0	NA	Intergenic	Intergenic	854817	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak2-38142-8-5-0.420259917226415-1.10484139239135	chr6	85295476	85295936	+	0	NA	intron (NM_001003955, intron 3 of 5)	intron (NM_001003955, intron 3 of 5)	-9339	NR_030486	735267		NR_030486	miRBase:MI0004689	Mir705	Mirn705|mmu-mir-705	microRNA 705	ncRNA
unique_peak1-488-11-2-1.92373108353046-2.32232533660526	chr1	178299606	178300333	+	0	NA	Intergenic	Intergenic	-94526	NM_176916	319455	Mm.338001	NM_176916	ENSMUSG00000055214	Pld5	B230365F16Rik	phospholipase D family, member 5	protein-coding
common_peak2-19911-25-35--0.308075096097206-0.423354874519378	chr1	119836691	119837490	+	0	NA	Intergenic	L1Md_F2|LINE|L1	370619	NM_011650	22099	Mm.426637	NM_011650	ENSMUSG00000026374	Tsn	2610034C24Rik|AU040286|C3PO|TB-RBP	translin	protein-coding
common_peak1-8218-21-21-0.110057646628938-0.344491671143527	chr10	8890895	8891948	+	0	NA	Intergenic	Intergenic	-285553	NM_175155	70097	Mm.338275	NM_175155	ENSMUSG00000015305	Sash1	1100001C18Rik|2500002E12Rik|A330076K04Rik|mKIAA0790	SAM and SH3 domain containing 1	protein-coding
unique_peak1-2761-12-6-0.841421063030034-1.58711810488664	chr17	5234190	5234741	+	0	NA	intron (NM_001085355, intron 4 of 19)	intron (NM_001085355, intron 4 of 19)	184302	NM_175349	106557	Mm.432764	NM_175349		Ldhal6b	4933402O15Rik|AI326310|LDHL|Ldhal	lactate dehydrogenase A-like 6B	protein-coding
unique_peak1-7208-12-4-1.32684789020028-2.04196296489515	chr9	70036568	70037054	+	0	NA	Intergenic	PB1D10|SINE|Alu	-18346	NM_181072	71602	Mm.249311	NM_181072	ENSMUSG00000032220	Myo1e	2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3	myosin IE	protein-coding
common_peak1-13254-17-23--0.366666162516118-0.383878263347744	chr19	32387667	32388577	+	0	NA	intron (NM_144792, intron 2 of 9)	intron (NM_144792, intron 2 of 9)	35684	NM_001168525	208449	Mm.329810	NM_144792	ENSMUSG00000040451	Sgms1	9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23	sphingomyelin synthase 1	protein-coding
common_peak2-20431-9-8-0.0196884049619079-1.03275496310833	chr10	30729642	30729951	+	0	NA	Intergenic	Intergenic	-167207	NM_013904	15214	Mm.103573	NM_013904	ENSMUSG00000019789	Hey2	CHF1|Herp1|Hrt2|bHLHb32|hesr2	hairy/enhancer-of-split related with YRPW motif 2	protein-coding
common_peak1-9447-42-31-0.742329327867184-1.66944648069025	chr11	102880569	102881664	+	0	NA	Intergenic	Intergenic	-2655	NM_026551	68087	Mm.277449	NM_026551	ENSMUSG00000020935	Dcakd	3010024O21Rik|6720485C15Rik|AI849483	dephospho-CoA kinase domain containing	protein-coding
common_peak1-10318-31-30-0.271042360426248-0.460129356264044	chr13	69611425	69612488	+	0	NA	Intergenic	Intergenic	60786	NM_198600	210106	Mm.315959	NM_198600	ENSMUSG00000034575	Papd7	LAK-1|POLK|Pols|TRF4|TRF4-1	PAP associated domain containing 7	protein-coding
unique_peak2-38859-2-7--1.91745425626332-1.45399745587252	chr7	144983375	144983780	+	0	NA	Intergenic	MTD|LTR|MaLR	354220	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
common_peak2-24804-16-19--0.203664452619301-0.325169893479371	chr17	66693399	66694383	+	0	NA	intron (NM_001114098, intron 12 of 14)	intron (NM_001114098, intron 12 of 14)	105199	NM_172963	68617	Mm.33421	NM_172963	ENSMUSG00000052105	Mtcl1	1110012J17Rik|Ccdc165|D130071O13|Kiaa0802|Soga2|mKIAA0802|t8219b25	microtubule crosslinking factor 1	protein-coding
common_peak1-15387-9-23--1.39534909431694-1.67711336403294	chr4	70410403	70410914	+	0	NA	Intergenic	L1MA6|LINE|L1	-214696	NM_172694	230316	Mm.251188	NM_172694		Megf9	4933405H16Rik|9630025C07|Egfl5|mKIAA0818	multiple EGF-like-domains 9	protein-coding
unique_peak2-35962-6-7--0.434601889619698-0.97990265578305	chr19	17262963	17263402	+	0	NA	intron (NM_181348, intron 11 of 19)	L1VL2|LINE|L1	150813	NM_001136484	14537	Mm.244825	NM_010265	ENSMUSG00000038843	Gcnt1	5630400D21Rik|B130048E03|C2 GlcNAcT|C2GNT|IGnT	glucosaminyl (N-acetyl) transferase 1, core 2	protein-coding
common_peak1-8752-11-9-0.186765489364251-0.344532117358383	chr11	4595060	4595619	+	0	NA	Intergenic	RMER19A|LTR|ERVK	9008	NM_197979	66152	Mm.269736	NM_197979	ENSMUSG00000059534	Uqcr10	1110020P15Rik|AA960494|Ucrc	ubiquinol-cytochrome c reductase, complex III subunit X	protein-coding
common_peak1-16968-75-89-0.24721389541361-0.660493963649647	chr6	86403954	86405222	+	0	NA	intron (NM_146170, intron 6 of 9)	B1_Mm|SINE|Alu	15948	NM_001243741	232196	Mm.404040	NM_146170	ENSMUSG00000046679	C87436	-	expressed sequence C87436	protein-coding
common_peak1-17203-20-12-0.787635066450101-0.949240599462708	chr6	125099206	125100077	+	0	NA	exon (NM_001039669, exon 2 of 10)	exon (NM_001039669, exon 2 of 10)	4372	NM_001039669	320678	Mm.129415	NM_178787	ENSMUSG00000038271	Iffo1	4733401N06Rik|A930037G23Rik|HOM-TES-103|Iffo	intermediate filament family orphan 1	protein-coding
unique_peak1-2366-18-6-1.50556422917075-2.02801025126771	chr15	88839122	88840063	+	0	NA	intron (NM_031260, intron 13 of 26)	L1M4|LINE|L1	26168	NM_031260	83456	Mm.358791	NM_031260	ENSMUSG00000015365	Mov10l1	CHAMP|Csm	Moloney leukemia virus 10-like 1	protein-coding
common_peak2-28195-10-7-0.356415345008769-1.12966497611638	chr4	116671862	116672330	+	0	NA	intron (NM_175244, intron 9 of 20)	intron (NM_175244, intron 9 of 20)	4143	NM_175244	76608	Mm.251420	NM_175244	ENSMUSG00000046861	Hectd3	1700064K09Rik|AI467540|AW743312	HECT domain containing 3	protein-coding
common_peak1-19262-26-46--0.626689759519175-1.0379745517287	chr9	111271815	111272695	+	0	NA	intron (NM_001164659, intron 11 of 21)	intron (NM_001164659, intron 11 of 21)	58012	NM_001164659	320429	Mm.270754	NM_001164659	ENSMUSG00000062296	Trank1	A230061D21Rik|C030048J01Rik|Gm187|Lba1	tetratricopeptide repeat and ankyrin repeat containing 1	protein-coding
unique_peak1-6210-8-1-2.00522241794757-2.05605744720049	chr7	73039843	73040473	+	0	NA	intron (NM_001291184, intron 1 of 20)	MIRb|SINE|MIR	33136	NM_011048	18553	Mm.294007	NM_011048	ENSMUSG00000030513	Pcsk6	C86343|Pace4|SPC4	proprotein convertase subtilisin/kexin type 6	protein-coding
common_peak2-25266-105-119-0.414443314914648-1.61411170324017	chr18	67640771	67641985	+	0	NA	Intergenic	Intergenic	16875	NM_144867	225655	Mm.221420	NM_144867	ENSMUSG00000024530	Slmo1	A230074A19Rik|BC019561	slowmo homolog 1 (Drosophila)	protein-coding
unique_peak1-6077-34-10-1.92263690836397-4.89888609789328	chr6	120173599	120175045	+	0	NA	intron (NM_198884, intron 5 of 19)	intron (NM_198884, intron 5 of 19)	70255	NM_198884	330406	Mm.321840	NM_198884	ENSMUSG00000041372	B4galnt3	AB114826|B4GalNAcT3|C330047A21	beta-1,4-N-acetyl-galactosaminyl transferase 3	protein-coding
unique_peak2-37699-7-11--0.785871670422967-1.21681515183528	chr5	100719143	100719672	+	0	NA	Intergenic	RMER16-int|LTR|ERVK	79696	NR_040679	69571	Mm.396412	NR_040679		2310034O05Rik	-	RIKEN cDNA 2310034O05 gene	ncRNA
common_peak2-31106-66-42-1.09221890972374-4.45195674625618	chr8	31149727	31151347	+	0	NA	Intergenic	L1Md_T|LINE|L1	-528330	NR_045856	71314	Mm.158666	NR_045856	ENSMUSG00000097044	4933433F19Rik	-	RIKEN cDNA 4933433F19 gene	ncRNA
unique_peak1-2159-8-5-0.420259917226415-1.10484139239135	chr15	59485863	59486384	+	0	NA	exon (NM_144549, exon 3 of 3)	exon (NM_144549, exon 3 of 3)	5914	NM_144549	211770	Mm.40298	NM_144549	ENSMUSG00000032501	Trib1	A530090O15Rik|TRB-1|Trb1	tribbles homolog 1 (Drosophila)	protein-coding
common_peak1-7842-21-23--0.0154732354549205-0.305650498375555	chr1	131107563	131108321	+	0	NA	Intergenic	L1_Mus2|LINE|L1	-61939	NM_172485	210417	Mm.380518	NM_172485	ENSMUSG00000042581	Thsd7b	1700074E13Rik|B930082A18|D130067I03Rik	thrombospondin, type I, domain containing 7B	protein-coding
common_peak1-9287-33-25-0.630897844384437-1.05951140195658	chr11	88497885	88499407	+	0	NA	intron (NM_054043, intron 5 of 13)	intron (NM_054043, intron 5 of 13)	80897	NM_054043	76626	Mm.400451	NM_054043	ENSMUSG00000069769	Msi2	1700105C15Rik|AI451722|AI563628|AW489193|Msi2h	musashi RNA-binding protein 2	protein-coding
unique_peak1-7348-9-2-1.60465090568306-1.87199725847353	chrX	9861945	9862493	+	0	NA	intron (NM_008769, intron 4 of 9)	L1MB1|LINE|L1	32734	NM_008769	18416	Mm.2611	NM_008769	ENSMUSG00000031173	Otc	AI265390|Sf|spf	ornithine transcarbamylase	protein-coding
unique_peak1-920-6-4-0.24347001549294-0.989110657569874	chr11	50226289	50226764	+	0	NA	intron (NM_172557, intron 7 of 17)	intron (NM_172557, intron 7 of 17)	18087	NM_172557	216724	Mm.390400	NM_172557	ENSMUSG00000020375	Rufy1	3000002E04Rik|Rabip4|ZFYVE12	RUN and FYVE domain containing 1	protein-coding
common_peak2-25209-11-15--0.491306415748387-0.435191258261915	chr18	60761538	60762322	+	0	NA	exon (NM_001109975, exon 2 of 2)	exon (NM_001109975, exon 2 of 2)	7828	NM_001109975	104027	Mm.252321	NM_177340	ENSMUSG00000043079	Synpo	9030217H17Rik|9130229N11|9330140I15Rik|AW046661	synaptopodin	protein-coding
common_peak1-8286-30-63--0.830324590508127-1.92045994443868	chr10	29312861	29313775	+	0	NA	Intergenic	Intergenic	-57645	NM_028351	72780	Mm.45191	NM_028351	ENSMUSG00000019880	Rspo3	2810459H04Rik|AW742308|Cristin1|Thsd2	R-spondin 3 homolog (Xenopus laevis)	protein-coding
unique_peak1-882-12-6-0.841421063030034-1.58711810488664	chr11	32262688	32263442	+	0	NA	intron (NM_177364, intron 1 of 12)	intron (NM_177364, intron 1 of 12)	15254	NM_177364	268396	Mm.227616	NM_177364	ENSMUSG00000040711	Sh3pxd2b	G431001E03Rik|TSK4|fad49	SH3 and PX domains 2B	protein-coding
unique_peak1-1959-8-1-2.00522241794757-2.05605744720049	chr14	105584704	105585228	+	0	NA	Intergenic	RMER6A|LTR|ERVK	-8422	NM_134077	74213	Mm.474531	NM_134077	ENSMUSG00000022119	Rbm26	1700009P03Rik|AI447318|C230097K14Rik|C86225|MLZ-393|Pro1777|Se70-2	RNA binding motif protein 26	protein-coding
common_peak1-17394-14-6-1.09186123830004-1.16633110333236	chr7	3274963	3275499	+	0	NA	Intergenic	B1_Mur3|SINE|Alu	-13808	NM_001093764	50918	Mm.29874	NM_016969	ENSMUSG00000068566	Myadm	D7Wsu62e	myeloid-associated differentiation marker	protein-coding
common_peak1-9920-39-49--0.0280949428555708-0.301029995663988	chr12	99392113	99393220	+	0	NA	Intergenic	Lx4A|LINE|L1	104881	NM_008079	14420	Mm.5120	NM_008079	ENSMUSG00000021003	Galc	2310068B06Rik|A930008M05Rik|AW212969|AW413532|Gacy|twi|twitcher	galactosylceramidase	protein-coding
common_peak2-23547-39-26-0.860873744755685-1.85759988472351	chr15	78868260	78869169	+	0	NA	TTS (NM_013847)	TTS (NM_013847)	-3601	NM_015738	14429	Mm.390805	NM_015738	ENSMUSG00000006378	Galr3	Galnr3	galanin receptor 3	protein-coding
common_peak1-15019-10-20--1.03590207776999-1.03889213727317	chr3	116861439	116861969	+	0	NA	Intergenic	Intergenic	-81021	NR_038029	433646	Mm.158997	NR_038029	ENSMUSG00000028009	1700061I17Rik	-	RIKEN cDNA 1700061I17 gene	ncRNA
unique_peak1-1988-10-3-1.35641534500877-1.75805390616669	chr15	36322739	36323335	+	0	NA	Intergenic	RSINE1|SINE|B4	103509	NM_175134	68839	Mm.396537	NM_175134	ENSMUSG00000048307	Ankrd46	1110054N06Rik|AI314978|AI987733	ankyrin repeat domain 46	protein-coding
unique_peak1-5834-12-3-1.64877598508764-2.36932189928148	chr6	72598589	72599114	+	0	NA	intron (NM_001079822, intron 4 of 12)	MTEb|LTR|MaLR	19026	NR_040421	100038714	Mm.321330	NR_040421		Gm15401	ENSMUSG00000072999|OTTMUSG00000021199	predicted gene 15401	ncRNA
unique_peak1-1244-19-7-1.40268732666169-1.89173646618542	chr11	114929874	114930895	+	0	NA	Intergenic	RSINE1|SINE|B4	-7032	NM_172050	217306	Mm.222667	NM_172050	ENSMUSG00000048498	Cd300e	BC034097|CLM2|Cd300le|TREM5	CD300e antigen	protein-coding
common_peak2-29820-16-7-1.11826364226806-1.23399803405144	chr6	91516022	91516538	+	0	NA	Intergenic	Intergenic	50251	NM_026309	67678	Mm.246693	NM_026309	ENSMUSG00000034192	Lsm3	1010001J12Rik|2610005D18Rik|6030401D18Rik|SMX4|USS2	LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)	protein-coding
unique_peak2-39111-7-5-0.214128329577033-1.01466476204226	chr8	80869013	80869424	+	0	NA	intron (NM_183096, intron 12 of 13)	intron (NM_183096, intron 12 of 13)	91333	NM_138944	18997	Mm.234261	NM_138944	ENSMUSG00000031688	Pou4f2	Brn-3.2|Brn-3b|Brn3b|Pou4f-rs1|mBrn3-3R	POU domain, class 4, transcription factor 2	protein-coding
unique_peak1-6003-20-3-2.48807478459119-3.8429424127101	chr6	103525512	103526439	+	0	NA	intron (NM_007697, intron 2 of 26)	L1Md_T|LINE|L1	65105	NM_007697	12661	Mm.251288	NM_007697	ENSMUSG00000030077	Chl1	A530023M13Rik|AI465420|CALL|LICAM2	cell adhesion molecule with homology to L1CAM	protein-coding
common_peak2-31179-21-44--0.922363831063439-1.59745120326141	chr8	46869483	46870783	+	0	NA	intron (NM_172752, intron 12 of 22)	intron (NM_172752, intron 12 of 22)	34518	NR_045739	319940	Mm.441720	NR_045739	ENSMUSG00000085440	Sorbs2os	D330022K07Rik	sorbin and SH3 domain containing 2, opposite strand	ncRNA
unique_peak1-1600-10-4-1.03448725012141-1.5150158574804	chr13	36729462	36729942	+	0	NA	Intergenic	Lx7|LINE|L1	96644	NM_153529	68404	Mm.232930	NM_153529	ENSMUSG00000039114	Nrn1	0710008J23Rik|Cpg15|Nrn	neuritin 1	protein-coding
common_peak2-29963-11-8-0.338768582809301-1.14218153353838	chr6	118562276	118562600	+	0	NA	intron (NM_001159533, intron 37 of 46)	intron (NM_001159533, intron 37 of 46)	-50164	NM_001081112	232339	Mm.276116	NM_001081112	ENSMUSG00000007827	Ankrd26	5730521P14Rik|BC008111|mKIAA1074	ankyrin repeat domain 26	protein-coding
common_peak1-10213-20-11-0.903112283870037-1.11267835143409	chr13	48982265	48983159	+	0	NA	intron (NM_001033268, intron 15 of 17)	B1_Mur1|SINE|Alu	-16458	NM_011078	18676	Mm.486213	NM_011078	ENSMUSG00000038025	Phf2	GRC5	PHD finger protein 2	protein-coding
unique_peak2-36507-7-6--0.00826409175941478-0.97990265578305	chr2	157147486	157147875	+	0	NA	intron (NM_019642, intron 16 of 16)	intron (NM_019642, intron 16 of 16)	24711	NM_010285	14601	Mm.389327	NM_010285	ENSMUSG00000027643	Ghrh	Ghrf	growth hormone releasing hormone	protein-coding
common_peak2-32131-9-22--1.33394854965279-1.52222891542741	chr9	106247205	106247976	+	0	NA	intron (NM_027354, intron 10 of 10)	intron (NM_027354, intron 10 of 10)	-23373	NM_153459	235584	Mm.275584	NM_153459	ENSMUSG00000053716	Dusp7	AU015694|Mkpx|Pyst2	dual specificity phosphatase 7	protein-coding
unique_peak2-35348-3-13--2.22133801201688-2.36932189928148	chr17	25114536	25115169	+	0	NA	intron (NM_020608, intron 11 of 20)	intron (NM_020608, intron 11 of 20)	-17284	NM_198937	52009	Mm.371601	NM_198937	ENSMUSG00000024165	Hn1l	2810430B18Rik|AL022629|C16orf34|D17Ertd441e	hematological and neurological expressed 1-like	protein-coding
unique_peak1-1215-29-6-2.30493515855751-5.23041074693956	chr11	106722611	106723796	+	0	NA	intron (NM_025481, intron 5 of 18)	B3A|SINE|B2	58826	NM_025481	66313	Mm.340955	NM_025481	ENSMUSG00000018363	Smurf2	2810411E22Rik|AI558114|AI649275	SMAD specific E3 ubiquitin protein ligase 2	protein-coding
unique_peak2-36241-4-6--0.830815435910851-0.989110657569874	chr2	39007651	39007926	+	0	NA	intron (NM_178778, intron 2 of 17)	intron (NM_178778, intron 2 of 17)	9967	NR_033526	100042584	Mm.451696	NR_033526		Gm16523	A130054J05Rik	mitochondrial ribosomal protein L40 pseudogene	pseudo
common_peak2-24655-46-55-0.0906410211911979-0.348250801558495	chr17	35776392	35777741	+	0	NA	intron (NM_001033366, intron 1 of 2)	ORR1D1|LTR|MaLR	3574	NM_001033366	268949	Mm.296301	NM_001033366	ENSMUSG00000073408	Dpcr1	Gm630	diffuse panbronchiolitis critical region 1 (human)	protein-coding
common_peak1-17652-30-49--0.474180780282851-0.734468890407008	chr7	58657818	58658939	+	0	NA	Intergenic	Intergenic	-108021	NR_073508	233246	Mm.254431	NM_177694	ENSMUSG00000055489	Ano5	9330162L24|Gdd1|Tmem16e	anoctamin 5	protein-coding
common_peak1-16225-14-22--0.624345795699369-0.590343908676233	chr5	100415653	100416340	+	0	NA	Intergenic	MMERVK10C-int|LTR|ERVK	-8039	NM_001077265	11991	Mm.150231	NM_007516		Hnrnpd	Auf1|Hnrpd	heterogeneous nuclear ribonucleoprotein D	protein-coding
common_peak2-28353-13-11-0.193509529916613-0.379391706698377	chr4	136021231	136021679	+	0	NA	Intergenic	ID|SINE|ID	-4221	NM_024452	269593	Mm.485824	NM_024452	ENSMUSG00000001089	Luzp1	2700072H04Rik|AI266952|Luzp|mFLJ00226	leucine zipper protein 1	protein-coding
common_peak2-29747-13-12-0.0780323124966764-0.334470287753051	chr6	86438879	86439484	+	0	NA	promoter-TSS (NR_040293)	promoter-TSS (NR_040293)	-960	NR_040292	381792	Mm.333223	NR_040292		2310040G24Rik	-	RIKEN cDNA 2310040G24 gene	ncRNA
common_peak2-26291-21-17-0.399564263823923-0.561823156887258	chr2	31572057	31572677	+	0	NA	intron (NM_001283047, intron 2 of 11)	intron (NM_001283047, intron 2 of 11)	28310	NM_001283046	11350	Mm.1318	NM_009594	ENSMUSG00000026842	Abl1	AI325092|Abl|E430008G22Rik|c-Abl	c-abl oncogene 1, non-receptor tyrosine kinase	protein-coding
common_peak2-25554-8-6-0.197867495889966-1.03789460276074	chr19	6275691	6276118	+	0	NA	promoter-TSS (NM_010119)	promoter-TSS (NM_010119)	-992	NM_010119	13660	Mm.30169	NM_010119	ENSMUSG00000024772	Ehd1	AA409636|Past1|RME-1	EH-domain containing 1	protein-coding
unique_peak1-6128-15-1-3.01216475055566-4.18809100057339	chr6	131316849	131317491	+	0	NA	intron (NM_011733, intron 8 of 8)	intron (NM_011733, intron 8 of 8)	21298	NM_139117	56449	Mm.458000	NM_011733	ENSMUSG00000030189	Ybx3	Csda|Dpba|MSY3|MSY4|Yb2|dbpA|oxyR	Y box protein 3	protein-coding
common_peak2-29776-14-14--0.00767443525087419-0.308519316180257	chr6	88084513	88084996	+	0	NA	Intergenic	Lx5|LINE|L1	-30502	NR_105795	102465196		NR_105795	miRBase:MI0021905	Mir6376	mmu-mir-6376	microRNA mir-6376	ncRNA
unique_peak1-4360-7-5-0.214128329577033-1.01466476204226	chr2	156416582	156416971	+	0	NA	Intergenic	RSINE1|SINE|B4	22382	NR_040372	100504350	Mm.94426	NR_040372	ENSMUSG00000086118	Gm14169	OTTMUSG00000015869	predicted gene 14169	ncRNA
common_peak2-29656-43-51-0.082123467382611-0.333814721158537	chr6	71439632	71440570	+	0	NA	Intergenic	Intergenic	-3787	NM_009543	22644	Mm.422969	NM_009543	ENSMUSG00000052656	Rnf103	AW146237|AW212918|Zfp103|kf-1	ring finger protein 103	protein-coding
common_peak2-21866-13-11-0.193509529916613-0.379391706698377	chr12	54492675	54493334	+	0	NA	intron (NM_013780, intron 2 of 11)	intron (NM_013780, intron 2 of 11)	143340	NM_013780	27386	Mm.247044	NM_013780	ENSMUSG00000021010	Npas3	4930423H22Rik|bHLHe12	neuronal PAS domain protein 3	protein-coding
common_peak1-17871-17-20--0.174021084573723-0.306598483909156	chr7	114275393	114276305	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-2853	NM_146780	258776	Mm.223207	NM_146780	ENSMUSG00000060503	Olfr715	MOR260-1	olfactory receptor 715	protein-coding
common_peak2-31771-25-40--0.495702099272978-0.683454027796267	chr9	22070847	22071784	+	0	NA	Intergenic	RLTR25A|LTR|ERVK	-6976	NM_181419	235048	Mm.292381	NM_181419	ENSMUSG00000062794	Zfp599	6720416P20	zinc finger protein 599	protein-coding
common_peak2-31809-12-13--0.158578936969966-0.301029995663979	chr9	38718265	38718896	+	0	NA	Intergenic	Intergenic	-19178	NM_146272	258269	Mm.377403	NM_146272	ENSMUSG00000063221	Olfr930	MOR171-46	olfactory receptor 930	protein-coding
common_peak2-22441-14-18--0.348711353085941-0.360333814299795	chr13	40913234	40913877	+	0	NA	Intergenic	Intergenic	-41582	NM_023887	14538	Mm.314757	NM_008105	ENSMUSG00000021360	Gcnt2	5330430K10Rik|IGnT|IGnTA|IGnTB|IGnTC	glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	protein-coding
unique_peak2-33752-8-5-0.420259917226415-1.10484139239135	chr11	117269039	117269472	+	0	NA	Intergenic	Intergenic	75628	NM_001113488	53860	Mm.38450	NM_017380	ENSMUSG00000059248	Sept9	MSF1|Msf|PNUTL4|Sint1	septin 9	protein-coding
common_peak1-14681-54-80--0.16676424125489-0.392502671390497	chr3	63928787	63929598	+	0	NA	intron (NM_001104592, intron 3 of 4)	Lx5|LINE|L1	12210	NM_001104592	100125586	Mm.469888	NM_001104592	ENSMUSG00000043897	Vmn2r2	ENSMUSG00000043897	vomeronasal 2, receptor 2	protein-coding
common_peak2-21638-35-23-0.846407757741348-1.63799378205027	chr11	101552044	101552745	+	0	NA	Intergenic	Intergenic	25539	NM_025404	80981	Mm.266840	NM_025404	ENSMUSG00000034936	Arl4d	1110036H21Rik|ARL6|AW456149|Arf4l|Arfl4|Arl5	ADP-ribosylation factor-like 4D	protein-coding
common_peak1-17717-19-25--0.297752391479405-0.376654945067947	chr7	79465524	79466373	+	0	NA	Intergenic	Intergenic	-14467	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding
unique_peak2-33705-0-8--4.01005593191652-2.05605744720049	chr11	108525905	108526413	+	0	NA	intron (NM_029606, intron 22 of 27)	intron (NM_029606, intron 22 of 27)	-17764	NM_145688	76380	Mm.344071	NM_029586	ENSMUSG00000020728	Cep112	1700001M19Rik|1700029K01Rik|8430407H02Rik|AV043680|AV207351|Ccdc46|Macoco	centrosomal protein 112	protein-coding
common_peak2-29903-11-8-0.338768582809301-1.14218153353838	chr6	113668510	113668880	+	0	NA	intron (NM_001286406, intron 1 of 2)	intron (NM_001286406, intron 1 of 2)	753	NM_001286405	58991	Mm.379095	NM_021488	ENSMUSG00000064177	Ghrl	2210006E23Rik|Ghr|MTLRP|MTLRPAP|m46	ghrelin	protein-coding
unique_peak2-37006-14-35--1.27070884108467-2.08778000015695	chr3	122321542	122322667	+	0	NA	intron (NM_001114665, intron 1 of 15)	CpG	528	NM_001114665	214459	Mm.209491	NM_153118	ENSMUSG00000039735	Fnbp1l	2610318I01Rik|AW548221|TOCA1|toca-1	formin binding protein 1-like	protein-coding
common_peak1-13908-17-5-1.63333383748388-2.19184853030482	chr2	80338686	80339380	+	0	NA	Intergenic	Intergenic	-51480	NM_011356	20378	Mm.427436	NM_011356	ENSMUSG00000027004	Frzb	Frp|Sfrp3|frezzled|fritz|frzb-1	frizzled-related protein	protein-coding
common_peak1-10709-12-11-0.0638134843664826-0.337263207250336	chr14	60251481	60252197	+	0	NA	Intergenic	PB1D7|SINE|Alu	7721	NM_145463	219134	Mm.275409	NM_145463	ENSMUSG00000044461	Shisa2	9430059P22Rik|MAd2|Tmem46|mShisa|shisa	shisa homolog 2 (Xenopus laevis)	protein-coding
unique_peak1-3663-20-3-2.48807478459119-3.8429424127101	chr19	40257030	40258024	+	0	NA	intron (NM_145499, intron 2 of 8)	intron (NM_145499, intron 2 of 8)	4249	NM_145499	226105	Mm.29119	NM_145499	ENSMUSG00000060613	Cyp2c70	-	cytochrome P450, family 2, subfamily c, polypeptide 70	protein-coding
unique_peak1-740-9-0-3.18961340640422-3.01029995663981	chr10	111313218	111313632	+	0	NA	Intergenic	Intergenic	-1993	NR_046029	629206	Mm.391444	NR_046029		Gm20758	-	predicted gene, 20758	ncRNA
common_peak2-27421-54-78--0.130694986547369-0.353159239817814	chr3	88830673	88832136	+	0	NA	intron (NM_138679, intron 6 of 26)	intron (NM_138679, intron 6 of 26)	61670	NM_138679	192195	Mm.130752	NM_138679	ENSMUSG00000028053	Ash1l	8030453L17Rik|Ash1|E430018P19Rik|Kmt2h	ash1 (absent, small, or homeotic)-like (Drosophila)	protein-coding
common_peak1-12515-67-86-0.101467986934267-0.360487696578537	chr18	16807785	16810112	+	0	NA	exon (NM_007664, exon 3 of 16)	exon (NM_007664, exon 3 of 16)	158610	NM_007664	12558	Mm.257437	NM_007664	ENSMUSG00000024304	Cdh2	CDHN|N-cadherin|Ncad	cadherin 2	protein-coding
common_peak1-8551-7-9--0.522837264589173-1.05908390183068	chr10	93421682	93422203	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	4666	NR_029764	723908		NR_029764	miRBase:MI0000609	Mir331	Mirn331|mmu-mir-331	microRNA 331	ncRNA
common_peak2-23690-9-7-0.18961340640422-1.05908390183068	chr15	86202820	86203312	+	0	NA	intron (NM_145476, intron 10 of 12)	intron (NM_145476, intron 10 of 12)	158177	NM_145476	223754	Mm.28904	NM_145476	ENSMUSG00000051864	Tbc1d22a	BC023106|D15Ertd781e	TBC1 domain family, member 22a	protein-coding
common_peak2-22548-12-17--0.521149016354673-0.417187467413082	chr13	59668671	59669569	+	0	NA	Intergenic	Lx8|LINE|L1	-10412	NM_023328	67269	Mm.153008	NM_023328	ENSMUSG00000021557	Agtpbp1	1700020N17Rik|2310001G17Rik|2900054O13Rik|4930445M19Rik|5730402G09Rik|CCP1|Nna1|nmf243|pcd	ATP/GTP binding protein 1	protein-coding
common_peak2-19581-25-40--0.495702099272978-0.683454027796267	chr1	16227877	16229325	+	0	NA	intron (NM_001111272, intron 11 of 12)	intron (NM_001111272, intron 11 of 12)	132638	NM_133832	98711	Mm.274376	NM_133832		Rdh10	3110069K09Rik|4921506A21Rik|AI875664|AW549993|D1Ertd762e|m366Asp	retinol dehydrogenase 10 (all-trans)	protein-coding
common_peak2-28049-91-108-0.305247620825412-0.953818797037946	chr4	58911089	58913149	+	0	NA	intron (NM_172381, intron 1 of 48)	intron (NM_172381, intron 1 of 48)	13478	NM_172381	230249	Mm.234801	NM_172381	ENSMUSG00000050812	AI314180	AW558785|BB181316|mKIAA0368	expressed sequence AI314180	protein-coding
unique_peak2-36216-5-7--0.704380336005853-1.01466476204226	chr2	35269826	35270117	+	0	NA	intron (NM_001145821, intron 4 of 7)	intron (NM_001145821, intron 4 of 7)	-17277	NM_001272040	74854	Mm.159338	NM_001080709	ENSMUSG00000079421	4930402F06Rik	-	RIKEN cDNA 4930402F06 gene	protein-coding
unique_peak2-35408-9-13--0.617741515653384-0.459837087125828	chr17	33254603	33255129	+	0	NA	Intergenic	Intergenic	21762	NM_177719	240069	Mm.157765	NM_177719	ENSMUSG00000048602	Morc2b	4932411A10Rik|Tce6	microrchidia 2B	protein-coding
common_peak2-27963-8-13--0.802132504110034-0.562038191119711	chr4	40853209	40853762	+	0	NA	Intergenic	Intergenic	-13604	NM_011463	20731	Mm.25246	NM_011463	ENSMUSG00000028415	Spink4	MPGC60	serine peptidase inhibitor, Kazal type 4	protein-coding
common_peak2-27052-26-16-0.840436250908123-1.24110690293937	chr2	180709361	180710063	+	0	NA	intron (NM_001177709, intron 7 of 11)	intron (NM_001177709, intron 7 of 11)	7707	NM_001177706	228998	Mm.33765	NM_145760	ENSMUSG00000027575	Arfgap1	AI115377|Arf1gap	ADP-ribosylation factor GTPase activating protein 1	protein-coding
common_peak2-24444-44-76--0.444893706126366-0.89245095702322	chr17	21961995	21962961	+	0	NA	intron (NM_029281, intron 2 of 4)	B1_Mus1|SINE|Alu	20248	NM_029281	75424	Mm.271252	NM_029281	ENSMUSG00000069743	Zfp820	2610036F08Rik	zinc finger protein 820	protein-coding
unique_peak2-32649-3-6--1.22133801201688-1.08602067057793	chr1	132316082	132316488	+	0	NA	exon (NM_007827, exon 3 of 10)	exon (NM_007827, exon 3 of 10)	3291	NM_007827	13137	Mm.436759	NM_007827	ENSMUSG00000026401	Daf2	AI323748|Cd55b|Daf|Daf-TM|TM-DAF	decay accelerating factor 2	protein-coding
common_peak2-27172-11-20--0.883623838527147-0.876666802405043	chr3	32616083	32616726	+	0	NA	intron (NM_019673, intron 5 of 13)	intron (NM_019673, intron 5 of 13)	8936	NM_019673	56456	Mm.41077	NM_019673	ENSMUSG00000027671	Actl6a	2810432C06Rik|AI851094|ARP4|Actl6|Baf53a|C79802	actin-like 6A	protein-coding
common_peak1-12955-76-42-1.33567963116118-6.98699877189634	chr19	53902498	53904254	+	0	NA	intron (NM_001170847, intron 5 of 13)	Lx3B|LINE|L1	-63345	NM_011050	18569	Mm.1605	NM_011050	ENSMUSG00000024975	Pdcd4	D19Ucla1|Ma3|Tis	programmed cell death 4	protein-coding
common_peak1-16210-88-121-0.0846750716076459-0.356629180543539	chr5	96793417	96795960	+	0	NA	Intergenic	MIRc|SINE|MIR	-8286	NM_175473	231470	Mm.291120	NM_175473	ENSMUSG00000034687	Fras1	E130113P14Rik|bl|mKIAA1500	Fraser syndrome 1 homolog (human)	protein-coding
common_peak1-7623-15-15-0.0121647505556561-0.30803596071496	chr1	63730575	63731247	+	0	NA	intron (NM_001081658, intron 2 of 14)	intron (NM_001081658, intron 2 of 14)	2590	NM_001081658	241073	Mm.297680	NM_001081658	ENSMUSG00000069085	Dytn	Gm215	dystrotelin	protein-coding
unique_peak2-35870-6-5--0.0195643903408542-0.947717972411649	chr18	79197540	79197837	+	0	NA	intron (NM_053099, intron 2 of 5)	intron (NM_053099, intron 2 of 5)	108442	NM_053099	240427	Mm.312871	NM_053099	ENSMUSG00000024548	Setbp1	C130092E12|Seb|mKIAA0437	SET binding protein 1	protein-coding
common_peak1-19483-19-29--0.504203268946832-0.580176690544129	chrX	143518361	143519168	+	0	NA	intron (NM_008312, intron 4 of 5)	L1_Mur2|LINE|L1	19316	NR_037210	100526462		NR_037210	miRBase:MI0004300	Mir1298	mmu-mir-1298	microRNA 1298	ncRNA
common_peak1-16151-31-32-0.18084455145467-0.379775532323848	chr5	76183324	76184559	+	0	NA	Intergenic	MLT1F2|LTR|MaLR	190512	NM_010612	16542	Mm.285	NM_010612	ENSMUSG00000062960	Kdr	6130401C07|Flk-1|Flk1|Krd-1|Ly73|VEGFR-2|VEGFR2|sVEGFR-2	kinase insert domain protein receptor	protein-coding
common_peak1-16402-61-36-1.17329596412039-4.44388276880307	chr5	125070566	125072980	+	0	NA	intron (NM_026486, intron 13 of 17)	L1MB5|LINE|L1	-7860	NM_011596	21871	Mm.1158	NM_011596		Atp6v0a2	8430408C20Rik|AI385560|ATP6a2|AW489264|Atp6n1d|Atp6n2|C76904|ISF|J6B7|SHIF|Stv1|TJ6M|TJ6s|Tj6|V-ATPase 116 kDa|V-ATPase a2	ATPase, H+ transporting, lysosomal V0 subunit A2	protein-coding
unique_peak2-33888-5-10--1.16381195464315-1.33892459842472	chr12	39912207	39912570	+	0	NA	Intergenic	Intergenic	402090	NM_001163154	14009	Mm.4866	NM_007960	ENSMUSG00000004151	Etv1	ER81|Etsrp81	ets variant 1	protein-coding
common_peak1-12189-12-13--0.158578936969966-0.301029995663979	chr17	31965638	31966178	+	0	NA	Intergenic	Intergenic	26829	NM_010831	17691	Mm.290941	NM_010831	ENSMUSG00000024042	Sik1	Msk|Sik|Snf1lk	salt inducible kinase 1	protein-coding
unique_peak2-34409-5-7--0.704380336005853-1.01466476204226	chr14	8421706	8422173	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-20859	NM_001270842	100041874	Mm.350858	NM_001270842	ENSMUSG00000079364	Gm3558	ENSMUSG00000079364	predicted gene 3558	protein-coding
common_peak1-8818-56-54-0.454236111914583-1.04668459253223	chr11	22511857	22513251	+	0	NA	Intergenic	Intergenic	100268	NM_153596	103765	Mm.221274	NM_153596	ENSMUSG00000049904	Tmem17	AI503894|AW049890	transmembrane protein 17	protein-coding
common_peak2-29172-39-44-0.123908150589479-0.359431063687663	chr5	134638593	134639349	+	0	NA	intron (NM_033572, intron 7 of 10)	intron (NM_033572, intron 7 of 10)	13666	NM_033572	94254	Mm.29508	NM_033572	ENSMUSG00000061979	Wbscr16	5730496C04Rik|AU019812	Williams-Beuren syndrome chromosome region 16 homolog (human)	protein-coding
common_peak2-20875-9-7-0.18961340640422-1.05908390183068	chr11	104316906	104317425	+	0	NA	Intergenic	Intergenic	-13560	NM_001081045	76719	Mm.136418	NM_001081045	ENSMUSG00000018412	Kansl1	1700081L11Rik|9430041J06Rik|mKIAA1267	KAT8 regulatory NSL complex subunit 1	protein-coding
unique_peak1-4724-11-3-1.50869358425161-1.95434855131066	chr3	105825900	105826545	+	0	NA	Intergenic	L2c|LINE|L2	-8658	NM_001200028	100503311	Mm.386825	NM_029604	ENSMUSG00000010136	Pifo	1700027A23Rik	primary cilia formation	protein-coding
common_peak2-19892-9-13--0.617741515653384-0.459837087125828	chr1	100230861	100231376	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-86583	NM_001164233	70866	Mm.389164	NM_027584	ENSMUSG00000026336	Slco6d1	4921511I05Rik	solute carrier organic anion transporter family, member 6d1	protein-coding
common_peak1-10546-41-57--0.156832290278912-0.350851889851556	chr14	18892944	18894042	+	0	NA	Intergenic	Intergenic	79335	NM_009380	21834	Mm.32563	NM_009380	ENSMUSG00000021779	Thrb	Nr1a2|T3R[b]|T3Rbeta|Thrb1|Thrb2|c-erbAbeta	thyroid hormone receptor beta	protein-coding
common_peak2-31969-14-19--0.422711934529718-0.403453972741636	chr9	67041143	67041687	+	0	NA	Intergenic	MLT1D|LTR|MaLR	43118	NR_029576	387185		NR_029576		Mir190a	Mir190|Mirn190|mir-190|mmu-mir-190|mmu-mir-190a	microRNA 190a	ncRNA
unique_peak2-35741-4-9--1.34538860874061-1.36011389749466	chr18	36687460	36687839	+	0	NA	promoter-TSS (NM_001271546)	promoter-TSS (NM_001271546)	-157	NM_172830	240215	Mm.135463	NM_172830	ENSMUSG00000024485	Slc4a9	AE4|D630003B07|D630024F24Rik	solute carrier family 4, sodium bicarbonate cotransporter, member 9	protein-coding
common_peak2-26518-149-238-0.028093689255325-0.317248880677388	chr2	90916788	90919027	+	0	NA	Intergenic	Intergenic	-7435	NM_001290765	68427	Mm.192375	NM_026721	ENSMUSG00000002105	Slc39a13	1100001L14Rik|AA387663|ZIP-13|ZIP13	solute carrier family 39 (metal ion transporter), member 13	protein-coding
common_peak2-23190-152-166-0.579912698215792-4.00962743381376	chr15	77969875	77971613	+	0	NA	Intergenic	Intergenic	-21034	NM_007583	12300	Mm.277338	NM_007583		Cacng2	AW060990|B230105C07Rik|B930041E13Rik|stargazer|stargazin|stg|wag|waggler	calcium channel, voltage-dependent, gamma subunit 2	protein-coding
common_peak2-32347-8-22--1.51833953810944-1.77631109801764	chrX	77796174	77796840	+	0	NA	Intergenic	RodERV21-int|LTR|ERV1	-519476	NM_138751	192216	Mm.490421	NM_138751	ENSMUSG00000025666	Tmem47	3010015F07Rik|AI115536|BCMP1|Tm4sf10	transmembrane protein 47	protein-coding
unique_peak1-4081-51-4-3.75299573071521-14.9900686750195	chr2	71533892	71535614	+	0	NA	Intergenic	MLT1C|LTR|MaLR	-22721	NR_037979	381371	Mm.330284	NM_201366	ENSMUSG00000064263	Gm1631	-	predicted gene 1631	ncRNA
common_peak2-21987-41-59--0.205741890759858-0.39695142494299	chr12	52604531	52604995	+	0	NA	Intergenic	Intergenic	-89565	NM_007728	12810	Mm.21325	NM_007728	ENSMUSG00000020953	Coch	AW122937|Coch-5B2|D12H14S564E	coagulation factor C homolog (Limulus polyphemus)	protein-coding
unique_peak2-34367-4-5--0.608423014574403-0.909929411522249	chr13	109211989	109212421	+	0	NA	Intergenic	RMER6A|LTR|ERVK	105674	NM_178683	218581	Mm.32318	NM_178683	ENSMUSG00000021697	Depdc1b	9830132O03|AW260467|XTP1	DEP domain containing 1B	protein-coding
common_peak2-25499-27-19-0.669617856007873-1.02859851787301	chr19	5425082	5425705	+	0	NA	promoter-TSS (NM_024176)	promoter-TSS (NM_024176)	249	NM_001256515	107242	Mm.329658	NM_134149	ENSMUSG00000047423	AI837181	Bles03|N28173	expressed sequence AI837181	protein-coding
common_peak2-32380-16-18--0.129663871175524-0.307235046933848	chrX	109141833	109142424	+	0	NA	Intergenic	Lx5|LINE|L1	-65001	NM_031382	83556	Mm.190608	NM_031382	ENSMUSG00000034555	Tex16	OTTMUSG00000018437	testis expressed gene 16	protein-coding
common_peak1-17997-9-8-0.0196884049619079-1.03275496310833	chr7	139295264	139295791	+	0	NA	intron (NM_018867, intron 4 of 13)	MTE2b|LTR|MaLR	50897	NM_018867	55987	Mm.471654	NM_018867	ENSMUSG00000030862	Cpxm2	4632435C11Rik|CPX-2|Cpx2	carboxypeptidase X 2 (M14 family)	protein-coding
common_peak2-31872-12-18--0.599151528355947-0.476916024233333	chr9	54733766	54734506	+	0	NA	intron (NM_022655, intron 6 of 21)	intron (NM_022655, intron 6 of 21)	22574	NM_022655	64602	Mm.208991	NM_022655	ENSMUSG00000032293	Ireb2	D9Ertd85e|Irp2	iron responsive element binding protein 2	protein-coding
common_peak2-20350-7-9--0.522837264589173-1.05908390183068	chr10	8890178	8890646	+	0	NA	Intergenic	Ricksha_c|DNA|MuDR	-284544	NM_175155	70097	Mm.338275	NM_175155	ENSMUSG00000015305	Sash1	1100001C18Rik|2500002E12Rik|A330076K04Rik|mKIAA0790	SAM and SH3 domain containing 1	protein-coding
unique_peak1-4450-10-4-1.03448725012141-1.5150158574804	chr2	173243871	173244300	+	0	NA	Intergenic	Intergenic	-104008	NM_028158	72221	Mm.46132	NM_028158	ENSMUSG00000027518	1700021F07Rik	-	RIKEN cDNA 1700021F07 gene	protein-coding
common_peak2-24307-122-140-0.442101004563194-2.07690567240058	chr17	35241324	35242995	+	0	NA	Intergenic	B3|SINE|B2	-3086	NM_148947	114652	Mm.222643	NM_148947	ENSMUSG00000034482	Ly6g5c	G5c|NG33	lymphocyte antigen 6 complex, locus G5C	protein-coding
common_peak2-23115-13-10-0.319040412000471-0.446472590016315	chr14	79519191	79519599	+	0	NA	intron (NM_027906, intron 37 of 44)	intron (NM_027906, intron 37 of 44)	127779	NM_001033215	105590	Mm.486536	NM_001033215	ENSMUSG00000071262	Zfp957	AU017455	zinc finger protein 957	protein-coding
common_peak1-18324-7-9--0.522837264589173-1.05908390183068	chr8	57511078	57511572	+	0	NA	Intergenic	Intergenic	874436	NM_175939	244486	Mm.67684	NM_175939	ENSMUSG00000046258	Adam29	-	a disintegrin and metallopeptidase domain 29	protein-coding
common_peak2-23946-40-34-0.529692665806132-1.04433310181892	chr16	13902397	13903352	+	0	NA	promoter-TSS (NM_001289562)	promoter-TSS (NM_001289562)	364	NM_001039533	94184	Mm.171484	NM_053181	ENSMUSG00000022680	Pdxdc1	2210010A19Rik|AA415817|Kiaa0251-hp	pyridoxal-dependent decarboxylase domain containing 1	protein-coding
unique_peak2-35260-4-9--1.34538860874061-1.36011389749466	chr17	31407904	31408401	+	0	NA	intron (NM_025290, intron 3 of 8)	RMER17A2|LTR|ERVK	6149	NM_025290	22092	Mm.12743	NM_025290	ENSMUSG00000024033	Rsph1	MCA|Tsga2	radial spoke head 1 homolog (Chlamydomonas)	protein-coding
unique_peak2-33961-3-5--0.998945590680433-0.96108193396963	chr12	80366548	80366912	+	0	NA	exon (NM_001008550, exon 23 of 42)	exon (NM_001008550, exon 23 of 42)	30539	NM_001008550	211978	Mm.297919	NM_001008550	ENSMUSG00000066440	Zfyve26	4930465A13|9330197E15Rik|A630028O16Rik|Gm893|mKIAA0321	zinc finger, FYVE domain containing 26	protein-coding
common_peak1-8157-48-35-0.801002149792502-2.06265032070493	chr1	193300970	193302701	+	0	NA	Intergenic	Intergenic	-80915	NM_144880	226849	Mm.205569	NM_144880	ENSMUSG00000026626	Ppp2r5a	PR61alpha	protein phosphatase 2, regulatory subunit B', alpha	protein-coding
unique_peak2-37351-3-20--2.80630051273804-3.35694334496952	chr4	133910304	133911094	+	0	NA	TTS (NM_001039677)	TTS (NM_001039677)	11738	NM_001039677	230810	Mm.358876	NM_001039677	ENSMUSG00000028836	Slc30a2	6030430C21|ZnT-2|Znt2	solute carrier family 30 (zinc transporter), member 2	protein-coding
unique_peak1-6242-10-1-2.35641534500877-2.57096726280955	chr7	18850587	18851042	+	0	NA	3' UTR (NM_153749, exon 5 of 5)	3' UTR (NM_153749, exon 5 of 5)	20118	NM_153749	266815	Mm.106769	NM_153749	ENSMUSG00000054005	Mill1	5530400I18Rik	MHC I like leukocyte 1	protein-coding
unique_peak1-1320-15-6-1.20480982849805-1.32521814697968	chr12	7918764	7919566	+	0	NA	Intergenic	Lx5|LINE|L1	-65318	NM_009693	238055	Mm.221239	NM_009693	ENSMUSG00000020609	Apob	AI315052|Apo B-100|apob-100|apob-48	apolipoprotein B	protein-coding
unique_peak2-35306-8-15--0.994777582052429-0.771068449301683	chr17	13654560	13655126	+	0	NA	Intergenic	Intergenic	-59479	NR_030763	272667	Mm.444718	NR_030763	ENSMUSG00000079711	Smok4a	4930513D10Rik|Smok2c	sperm motility kinase 4A	pseudo
unique_peak2-35160-10-23--1.22854715571239-1.44380006500971	chr16	34000931	34001945	+	0	NA	intron (NM_177357, intron 51 of 59)	B1_Mur4|SINE|Alu	-34349	NM_009471	22247	Mm.13145	NM_009471	ENSMUSG00000022814	Umps	1700095D23Rik|AA408257|AL033308|BB164745	uridine monophosphate synthetase	protein-coding
common_peak1-16989-15-13-0.204809828498052-0.368541233333383	chr6	87837801	87838606	+	0	NA	intron (NM_017477, intron 1 of 23)	intron (NM_017477, intron 1 of 23)	237	NM_201244	54161	Mm.258785	NM_017477	ENSMUSG00000030058	Copg1	AU019265|BC056168|Copg|D6Ertd71e|D6Wsu16e	coatomer protein complex, subunit gamma 1	protein-coding
common_peak1-15888-24-15-0.793209902767717-1.16796998271032	chr5	12220322	12221743	+	0	NA	Intergenic	RMER17C-int|LTR|ERVK	-162134	NM_028882	108151	Mm.89313	NM_028882	ENSMUSG00000040254	Sema3d	4631426B19Rik	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D	protein-coding
common_peak2-25198-7-10--0.660340788339108-1.12966497611638	chr18	60596216	60596613	+	0	NA	Intergenic	Lx8|LINE|L1	60731	NM_001146275	60440	Mm.261140	NM_021792	ENSMUSG00000054072	Iigp1	2900074L10Rik|AI046432|AW111922|Ifgga1|Iigp|Irga6	interferon inducible GTPase 1	protein-coding
common_peak1-12892-57-92--0.273125771029102-0.590512137238174	chr18	80933324	80934334	+	0	NA	intron (NM_001201569, intron 28 of 29)	intron (NM_001201569, intron 28 of 29)	-24019	NM_001164109	18018	Mm.329560	NM_016791	ENSMUSG00000033016	Nfatc1	2210017P03Rik|AI449492|AV076380|NF-ATc|NFAT2|NFATc|Nfatcb	nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1	protein-coding
common_peak1-18440-22-20-0.254966682308644-0.421916810733237	chr8	80879847	80880661	+	0	NA	intron (NM_183096, intron 12 of 13)	L2|LINE|L2	80297	NM_138944	18997	Mm.234261	NM_138944	ENSMUSG00000031688	Pou4f2	Brn-3.2|Brn-3b|Brn3b|Pou4f-rs1|mBrn3-3R	POU domain, class 4, transcription factor 2	protein-coding
common_peak2-29444-8-10--0.454209200689727-1.078512453669	chr6	17353566	17353990	+	0	NA	Intergenic	Intergenic	-60179	NM_008591	17295	Mm.86844	NM_008591	ENSMUSG00000009376	Met	AI838057|HGF|HGFR|Par4|c-Met	met proto-oncogene	protein-coding
common_peak2-27482-30-42--0.256589345210225-0.401350871931209	chr3	94443170	94444152	+	0	NA	intron (NM_011656, intron 1 of 12)	intron (NM_011656, intron 1 of 12)	19133	NM_001293728	22156	Mm.10214	NM_011656	ENSMUSG00000005968	Tuft1	-	tuftelin 1	protein-coding
common_peak2-23461-59-93--0.22922485080506-0.513356579122551	chr15	68362240	68363394	+	0	NA	Intergenic	Intergenic	-189966	NR_029718	387228		NR_029718	miRBase:MI0000549	Mir30d	Mirn30d|mmu-mir-30d	microRNA 30d	ncRNA
common_peak1-9659-23-32--0.322626614849373-0.436052471002795	chr12	116047675	116048460	+	0	NA	Intergenic	Intergenic	-296162	NR_106063	102465664		NR_106063	miRBase:MI0022945	Mir7094-2	mmu-mir-7094-2	microRNA mir-7094-2	ncRNA
unique_peak1-3589-11-3-1.50869358425161-1.95434855131066	chr19	30106082	30106549	+	0	NA	intron (NM_144873, intron 1 of 15)	intron (NM_144873, intron 1 of 15)	1312	NM_144873	109113	Mm.313364	NM_144873	ENSMUSG00000024817	Uhrf2	2310065A22Rik|AI426270|AW214556|D130071B19Rik|Nirf	ubiquitin-like, containing PHD and RING finger domains 2	protein-coding
common_peak1-18147-20-11-0.903112283870037-1.11267835143409	chr8	11337992	11338895	+	0	NA	intron (NM_009932, intron 3 of 47)	intron (NM_009932, intron 3 of 47)	25614	NM_009932	12827	Mm.181021	NM_009932	ENSMUSG00000031503	Col4a2	Col4a-2	collagen, type IV, alpha 2	protein-coding
unique_peak2-35682-3-8--1.58390809140159-1.39487600375387	chr18	16739822	16740265	+	0	NA	Intergenic	Intergenic	227515	NM_007664	12558	Mm.257437	NM_007664	ENSMUSG00000024304	Cdh2	CDHN|N-cadherin|Ncad	cadherin 2	protein-coding
unique_peak2-37116-0-6--3.64748585253182-1.56314192529759	chr4	8395295	8395656	+	0	NA	Intergenic	Lx|LINE|L1	-67316	NM_021518	59021	Mm.397471	NM_021518	ENSMUSG00000047187	Rab2a	9330148M11Rik|C80220|Rab2	RAB2A, member RAS oncogene family	protein-coding
common_peak1-9559-71-85-0.218179424017873-0.565418124657885	chr11	117654467	117655941	+	0	NA	TTS (NM_001195088)	TTS (NM_001195088)	-3770	NM_029964	77727	Mm.159981	NM_029964	ENSMUSG00000025573	6030468B19Rik	-	RIKEN cDNA 6030468B19 gene	protein-coding
unique_peak2-38306-12-25--1.05166373305345-1.1381569562463	chr6	137582488	137583599	+	0	NA	intron (NM_007945, intron 1 of 21)	PB1D7|SINE|Alu	14763	NM_001271588	13860	Mm.235346	NM_007945	ENSMUSG00000015766	Eps8	AW261790	epidermal growth factor receptor pathway substrate 8	protein-coding
unique_peak1-5739-30-4-2.84774731460451-6.69496016203892	chr6	47318987	47320468	+	0	NA	Intergenic	Intergenic	-84596	NM_012042	26965	Mm.87611	NM_012042	ENSMUSG00000029686	Cul1	-	cullin 1	protein-coding
common_peak2-26071-9-7-0.18961340640422-1.05908390183068	chr2	91963133	91963563	+	0	NA	Intergenic	Intergenic	-60991	NM_138755	192285	Mm.330408	NM_138755	ENSMUSG00000058318	Phf21a	80kDa|Bhc|Bhc80|D030065N23Rik|PFTF1	PHD finger protein 21A	protein-coding
common_peak2-23106-15-11-0.4272022498345-0.503257505534083	chr14	79066232	79066759	+	0	NA	intron (NM_001081336, intron 1 of 28)	intron (NM_001081336, intron 1 of 28)	-22237	NR_104044	380921	Mm.89591	NM_001081336	ENSMUSG00000034731	Dgkh	5930402B05Rik|D130015C16	diacylglycerol kinase, eta	protein-coding
common_peak1-18519-19-13-0.595332404604082-0.713635438203849	chr8	90908553	90909193	+	0	NA	Intergenic	Intergenic	-22783	NM_012047	26992	Mm.5400	NM_012047		Brd7	BP75|CELTIX1|Ptpn13ip	bromodomain containing 7	protein-coding
common_peak2-21902-36-72--0.710503472712263-1.66629652699066	chr12	8498703	8500034	+	0	NA	Intergenic	Intergenic	7423	NM_007483	11852	Mm.687	NM_007483	ENSMUSG00000054364	Rhob	AA017882|Arh6|Arhb	ras homolog gene family, member B	protein-coding
unique_peak1-415-15-4-1.69023665566829-1.97518968347063	chr1	160036629	160037262	+	0	NA	Intergenic	Intergenic	249446	NM_207583	240843	Mm.329579	NM_207583	ENSMUSG00000004031	Brinp2	6430517E21Rik|BB361039|Fam5b|mKIAA1747	bone morphogenic protein/retinoic acid inducible neural-specific 2	protein-coding
unique_peak1-96-15-6-1.20480982849805-1.32521814697968	chr1	51508272	51508932	+	0	NA	Intergenic	Intergenic	26641	NM_028696	109019	Mm.196290	NM_028696	ENSMUSG00000026107	Nabp1	4930434H03Rik|4930442A21Rik|4930488J04Rik|4933440J18Rik|5830411E10Rik|AI852561|Nbp1|Obfc2a|Ssb2	nucleic acid binding protein 1	protein-coding
unique_peak2-38172-6-10--0.894033508256995-1.21398586181642	chr6	89595114	89595655	+	0	NA	intron (NM_153162, intron 1 of 15)	intron (NM_153162, intron 1 of 15)	1402	NM_001178058	232223	Mm.229332	NM_153162	ENSMUSG00000000811	Txnrd3	AI196535|TR2|Tgr	thioredoxin reductase 3	protein-coding
common_peak1-15882-7-7--0.200909169701811-0.97990265578305	chr5	8719481	8719956	+	0	NA	intron (NM_011076, intron 18 of 27)	intron (NM_011076, intron 18 of 27)	59626	NM_011076	18671	Mm.207354	NM_011076	ENSMUSG00000040584	Abcb1a	Abcb4|Evi32|Mdr1a|Mdr3|P-gp|Pgp|Pgy-3|Pgy3|mdr-3	ATP-binding cassette, sub-family B (MDR/TAP), member 1A	protein-coding
common_peak2-20834-41-48-0.0864388607334519-0.335782825099843	chr11	5520984	5521729	+	0	NA	intron (NM_023816, intron 15 of 26)	intron (NM_023816, intron 15 of 26)	51669	NM_023816	76389	Mm.67300	NM_023816	ENSMUSG00000020481	Ankrd36	1700008J08Rik|1700012M14Rik|Ankrd48	ankyrin repeat domain 36	protein-coding
common_peak1-7931-12-5-1.06381348436648-1.78669045979184	chr1	150115002	150115735	+	0	NA	Intergenic	Intergenic	1693046	NM_008869	18783	Mm.4186	NM_008869	ENSMUSG00000056220	Pla2g4a	Pla2g4|cPLA2|cPLA2alpha	phospholipase A2, group IVA (cytosolic, calcium-dependent)	protein-coding
unique_peak2-33567-3-5--0.998945590680433-0.96108193396963	chr11	84819078	84819388	+	0	NA	intron (NM_001029934, intron 29 of 33)	intron (NM_001029934, intron 29 of 33)	47977	NM_007607	12351	Mm.1641	NM_007607	ENSMUSG00000000805	Car4	AW456718|Ca4	carbonic anhydrase 4	protein-coding
common_peak2-23397-73-98-0.0630383863456121-0.328041145103237	chr15	58888364	58890055	+	0	NA	intron (NM_001146180, intron 2 of 13)	intron (NM_001146180, intron 2 of 13)	24372	NM_001146180	211401	Mm.215481	NM_144800	ENSMUSG00000022353	Mtss1	2310003N14Rik|BC024131|D130001D01Rik|Mim|mKIAA0429	metastasis suppressor 1	protein-coding
common_peak1-13110-53-46-0.586384160738291-1.46999668045562	chr19	8836962	8838144	+	0	NA	intron (NM_001276704, intron 3 of 19)	intron (NM_001276704, intron 3 of 19)	5946	NM_001276704	53319	Mm.7271	NM_016813	ENSMUSG00000010097	Nxf1	Mex67|Mvb1|Tap	nuclear RNA export factor 1	protein-coding
common_peak1-8832-58-84--0.113441001247205-0.334340012190691	chr11	23665197	23666921	+	0	NA	intron (NM_009044, intron 1 of 9)	intron (NM_009044, intron 1 of 9)	4911	NM_009044	19696	Mm.4869	NM_009044	ENSMUSG00000020275	Rel	c-Rel	reticuloendotheliosis oncogene	protein-coding
unique_peak1-139-11-0-3.50869358425161-3.61235994796777	chr1	70179916	70180512	+	0	NA	intron (NM_029160, intron 11 of 16)	intron (NM_029160, intron 11 of 16)	182025	NM_025728	66722	Mm.440554	NM_025728	ENSMUSG00000053153	Spag16	4921511D23Rik|4930524F24Rik|4930585K05Rik|AV261009|Pf20|Wdr29	sperm associated antigen 16	protein-coding
common_peak2-25861-11-18--0.739233929191972-0.671582559449692	chr19	42752394	42753071	+	0	NA	Intergenic	Intergenic	-65436	NM_053083	67573	Mm.178767	NM_053083	ENSMUSG00000025185	Loxl4	4833426I20Rik|Loxc	lysyl oxidase-like 4	protein-coding
common_peak1-9536-25-30--0.0923464050417691-0.304710633611958	chr11	116130133	116131228	+	0	NA	intron (NM_146032, intron 2 of 15)	intron (NM_146032, intron 2 of 15)	4851	NM_146032	217337	Mm.29655	NM_146032	ENSMUSG00000020780	Srp68	2610024I03Rik	signal recognition particle 68	protein-coding
common_peak2-28415-18-11-0.727956650507195-0.876666802405043	chr4	141559612	141560202	+	0	NA	intron (NM_177868, intron 1 of 31)	intron (NM_177868, intron 1 of 31)	7659	NM_177868	329977	Mm.252019	NM_028429	ENSMUSG00000051435	Fhad1	2900090M10Rik|B230311F11	forkhead-associated (FHA) phosphopeptide binding domain 1	protein-coding
unique_peak2-35772-7-9--0.522837264589173-1.05908390183068	chr18	44535778	44536242	+	0	NA	Intergenic	Lx2|LINE|L1	-4144	NM_027490	70640	Mm.87629	NM_027490	ENSMUSG00000024472	Dcp2	2410015D23Rik|5730537H01Rik|AL118268	DCP2 decapping enzyme homolog (S. cerevisiae)	protein-coding
common_peak2-22189-15-19--0.309763344331706-0.356936432242222	chr12	108179751	108180407	+	0	NA	Intergenic	Intergenic	-225545	NR_015512	71033	Mm.159404	NR_015512	ENSMUSG00000085820	4933406K04Rik	4930426M03Rik|4930485I22Rik|4933427G14Rik	RIKEN cDNA 4933406K04 gene	ncRNA
unique_peak2-37338-2-4--1.23938235115068-0.931118710592187	chr4	130815446	130815847	+	0	NA	Intergenic	Intergenic	315346	NM_010769	17180	Mm.271796	NM_010769	ENSMUSG00000040533	Matn1	CMP|Crtm|Mat1|matrilin-1	matrilin 1, cartilage matrix protein	protein-coding
unique_peak1-2328-7-1-1.79909083029819-1.80617997398389	chr15	83441140	83441645	+	0	NA	intron (NM_022723, intron 18 of 21)	B1_Mur4|SINE|Alu	-15805	NM_183017	223723	Mm.46778	NM_183017	ENSMUSG00000016757	Ttll12	BC055368|D430005B17	tubulin tyrosine ligase-like family, member 12	protein-coding
common_peak2-22848-43-46-0.227974333846065-0.475408985215012	chr14	24244953	24246074	+	0	NA	intron (NM_010610, intron 18 of 28)	intron (NM_010610, intron 18 of 28)	-331720	NR_033550	791307	Mm.364384	NR_033550	ENSMUSG00000068680	Gm10248	ENSMUSG00000068680	predicted gene 10248	ncRNA
unique_peak1-7401-10-8-0.186490343566457-1.078512453669	chrX	126755189	126755876	+	0	NA	intron (NM_172493, intron 23 of 26)	intron (NM_172493, intron 23 of 26)	471254	NM_172493	54004	Mm.10763	NM_017398	ENSMUSG00000034480	Diap2	Dia3|Diaph2|Drf2|E430022I22Rik	diaphanous homolog 2 (Drosophila)	protein-coding
unique_peak1-5125-8-11--0.579740082773585-1.14218153353838	chr5	100597505	100598006	+	0	NA	Intergenic	Intergenic	-8928	NM_182841	231503	Mm.99790	NM_182841	ENSMUSG00000050640	Tmem150c	-	transmembrane protein 150C	protein-coding
common_peak2-31366-94-176--0.338015982233681-1.19354504831001	chr8	84975597	84978813	+	0	NA	Intergenic	Intergenic	-50720	NM_008357	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak1-17507-40-16-1.57151284150076-4.47502662768491	chr7	25878377	25880055	+	0	NA	intron (NM_011138, intron 12 of 13)	intron (NM_011138, intron 12 of 13)	2978	NR_105855	102465968		NR_105855		Mir6537	mmu-mir-6537	microRNA mir-6537	ncRNA
common_peak1-17187-9-17--0.980311595038092-0.844317084070804	chr6	124484327	124484912	+	0	NA	intron (NM_144938, intron 7 of 11)	B1F|SINE|Alu	7720	NM_144938	50908	Mm.219527	NM_144938	ENSMUSG00000038521	C1s1	AA959438|AI255193|AI327365|C1s|C1sa	complement component 1, s subcomponent 1	protein-coding
common_peak1-13476-113-155-0.163267526834461-0.564400141571742	chr2	4881244	4883004	+	0	NA	Intergenic	Intergenic	-15044	NM_001113558	68527	Mm.27791	NM_026754	ENSMUSG00000026668	Ucma	1110017I16Rik|AW121955|Grp	upper zone of growth plate and cartilage matrix associated	protein-coding
common_peak2-30677-38-44-0.0795995629688555-0.338806640379593	chr7	105481434	105482877	+	0	NA	Intergenic	Intergenic	-24118	NM_025408	66190	Mm.334041	NM_025408	ENSMUSG00000030760	Acer3	1110057L18Rik|5430429L08Rik|AV015045|Phca	alkaline ceramidase 3	protein-coding
common_peak2-23971-9-13--0.617741515653384-0.459837087125828	chr16	17282791	17283183	+	0	NA	exon (NM_001001983, exon 49 of 55)	exon (NM_001001983, exon 49 of 55)	6594	NM_177473	224019	Mm.246388	NM_177473	ENSMUSG00000055692	Tmem191c	4933405M22Rik|D16Bwg1494e	transmembrane protein 191C	protein-coding
common_peak1-10782-10-18--0.891512168434816-0.804350088532826	chr14	74732333	74732846	+	0	NA	Intergenic	Intergenic	-22745	NR_046059	74425	Mm.399498	NR_046059		4933402J15Rik	-	RIKEN cDNA 4933402J15 gene	ncRNA
unique_peak1-125-16-8-0.948338640825749-1.02063122982878	chr1	64003647	64004299	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-7328	NR_027824	433315	Mm.342696	NM_001013800	ENSMUSG00000044689	Gm13749	OTTMUSG00000013918	predicted gene 13749	ncRNA
unique_peak1-582-22-7-1.6472841050874-2.63337704757512	chr10	7725829	7726703	+	0	NA	Intergenic	Intergenic	-50345	NM_138667	68652	Mm.193041	NM_138667	ENSMUSG00000015755	Tab2	1110030N06Rik|A530078N03Rik|Map3k7ip2|mKIAA0733	TGF-beta activated kinase 1/MAP3K7 binding protein 2	protein-coding
common_peak2-23369-17-22--0.305265617851975-0.348739088570342	chr15	54277985	54278780	+	0	NA	intron (NM_173422, intron 3 of 5)	L1Md_T|LINE|L1	36053	NM_173422	239447	Mm.82400	NM_173422	ENSMUSG00000038591	Colec10	CL-L1	collectin sub-family member 10	protein-coding
common_peak2-28055-8-7-0.00522241794757061-1.00793137938329	chr4	59320838	59321299	+	0	NA	Intergenic	MLT1E1A|LTR|MaLR	48145	NR_105031	101055769	Mm.421401	NR_105031		LOC101055769	-	uncharacterized LOC101055769	ncRNA
common_peak2-27371-19-59--1.50420326894683-4.38310456572582	chr3	85886512	85887551	+	0	NA	Intergenic	Intergenic	-1325	NM_001082414	27059	Mm.2454	NM_012059	ENSMUSG00000028082	Sh3d19	AW011754|Kryn	SH3 domain protein D19	protein-coding
common_peak2-26417-211-270-0.452258789426764-3.77119708482268	chr2	60124328	60126022	+	0	NA	Intergenic	L1MC|LINE|L1	-2634	NM_001290660	66205	Mm.227281	NM_025422	ENSMUSG00000060703	Cd302	1110055L24Rik|AI159627	CD302 antigen	protein-coding
common_peak1-9121-22-57--1.21069689004017-3.08612073477863	chr11	74831286	74832180	+	0	NA	intron (NM_001002764, intron 10 of 18)	intron (NM_001002764, intron 10 of 18)	47760	NR_030454	735274		NR_030454		Mir684-1	Mirn684-1	microRNA 684-1	ncRNA
unique_peak1-1029-16-8-0.948338640825749-1.02063122982878	chr11	76011681	76012408	+	0	NA	Intergenic	B1F1|SINE|Alu	-3514	NM_027773	116972	Mm.188413	NM_027773		Fam57a	2310047D13Rik|4932415L08Rik|5430402E13Rik|5430420K21Rik|Wdt3	family with sequence similarity 57, member A	protein-coding
unique_peak1-3925-20-2-2.90311228387004-4.53603905993749	chr2	26481661	26482490	+	0	NA	Intergenic	B2_Mm1a|SINE|B2	-1902	NM_019833	56279	Mm.279863	NM_019833	ENSMUSG00000036186	Fam69b	AB030186|AW209000|B230317C12Rik|PIP49	family with sequence similarity 69, member B	protein-coding
unique_peak1-4894-14-7-0.899216160357645-0.947446088118041	chr4	45107544	45108166	+	0	NA	Intergenic	Lx6|LINE|L1	-10379	NM_001024142	269529	Mm.389552	NM_001024142	ENSMUSG00000048232	Fbxo10	FBX10|Gm634	F-box protein 10	protein-coding
common_peak1-16790-44-55-0.0145379125109315-0.308785666485023	chr6	40471165	40472259	+	0	NA	Intergenic	Intergenic	-2205	NM_026317	67690	Mm.52550	NM_026317	ENSMUSG00000029909	Prss37	1700016G05Rik|Tryx2	protease, serine 37	protein-coding
unique_peak2-34767-1-4--1.94898510510411-1.10720996964787	chr15	59232104	59232380	+	0	NA	intron (NM_026746, intron 2 of 6)	Lx6|LINE|L1	26489	NM_001164604	68501	Mm.27762	NM_026746	ENSMUSG00000059586	Nsmce2	1110014D18Rik|AI661537	non-SMC element 2 homolog (MMS21, S. cerevisiae)	protein-coding
common_peak2-19828-9-7-0.18961340640422-1.05908390183068	chr1	89122028	89122464	+	0	NA	intron (NM_001039169, intron 4 of 6)	intron (NM_001039169, intron 4 of 6)	11732	NM_001039169	26987	Mm.227183	NM_023314	ENSMUSG00000026254	Eif4e2	2700069E09Rik|AI036339|AV129531|D0H0S6743E|Eif4el3	eukaryotic translation initiation factor 4E member 2	protein-coding
common_peak1-17367-101-143-0.0840892352941074-0.374404511353022	chr7	59227796	59230103	+	0	NA	intron (NM_008087, intron 7 of 7)	intron (NM_008087, intron 7 of 7)	32135	NR_027704	75744	Mm.386823	NM_001160345	ENSMUSG00000074093	Svip	1700006C13Rik|6620401M08Rik	small VCP/p97-interacting protein	protein-coding
unique_peak2-35462-3-6--1.22133801201688-1.08602067057793	chr17	42892067	42892524	+	0	NA	Intergenic	Lx6|LINE|L1	-13167	NM_001033493	435529	Mm.136350	NM_001033493	ENSMUSG00000057899	Gpr111	PGR20	G protein-coupled receptor 111	protein-coding
common_peak2-23920-30-35--0.000249591950439054-0.304088508634279	chr16	10286517	10287351	+	0	NA	intron (NM_007929, intron 3 of 4)	intron (NM_007929, intron 3 of 4)	27127	NM_007929	13731	Mm.246009	NM_007929	ENSMUSG00000022505	Emp2	XMP	epithelial membrane protein 2	protein-coding
common_peak2-20101-42-62--0.234950595632733-0.420930521695299	chr1	159231567	159233201	+	0	NA	intron (NM_177644, intron 1 of 17)	Charlie1a|DNA|MER1_type	-110099	NR_027984	69953	Mm.286863	NM_027274	ENSMUSG00000049881	2810025M15Rik	AI429618	RIKEN cDNA 2810025M15 gene	ncRNA
unique_peak2-37952-4-11--1.6084230145744-1.68134727924692	chr5	151112355	151112777	+	0	NA	intron (NM_172887, intron 1 of 60)	intron (NM_172887, intron 1 of 60)	50061	NM_172887	320365	Mm.216590	NM_172887	ENSMUSG00000056602	Fry	13CDNA73|9330186A19Rik|AF346502|AI462658|C87180|D930046M03|cg003|mKIAA4143	furry homolog (Drosophila)	protein-coding
common_peak1-14959-57-19-1.94410494519157-8.45797546399247	chr3	104672892	104675447	+	0	NA	intron (NR_045578, intron 3 of 13)	MLT1A0|LTR|MaLR	6745	NM_153091	229681	Mm.206379	NM_153091		St7l	St7r	suppression of tumorigenicity 7-like	protein-coding
common_peak2-26110-16-14-0.211373046659543-0.364171515310935	chr2	4651668	4652203	+	0	NA	intron (NM_178663, intron 2 of 8)	intron (NM_178663, intron 2 of 8)	13058	NM_178663	209645	Mm.149539	NM_178663	ENSMUSG00000048186	Bend7	1110017O21Rik|E130319B15Rik	BEN domain containing 7	protein-coding
common_peak1-16622-84-66-0.868844868431253-3.9787926070032	chr6	121109467	121110860	+	0	NA	Intergenic	Intergenic	-23522	NM_028730	74043	Mm.491240	NM_028730	ENSMUSG00000067825	Pex26	4632428M11Rik|AI853212	peroxisomal biogenesis factor 26	protein-coding
unique_peak1-1361-12-5-1.06381348436648-1.78669045979184	chr12	29934108	29934620	+	0	NA	Intergenic	Intergenic	-278885	NM_001093775	17933	Mm.253067	NM_008666	ENSMUSG00000061911	Myt1l	2900046C06Rik|2900093J19Rik|C630034G21Rik|Nztf1|Pmng1|Png-1|mKIAA1106	myelin transcription factor 1-like	protein-coding
common_peak1-13037-26-21-0.468467473521165-0.647723624534446	chr19	5689421	5690575	+	0	NA	5' UTR (NM_022012, exon 3 of 12)	5' UTR (NM_022012, exon 3 of 12)	867	NM_022012	26403	Mm.185026	NM_022012	ENSMUSG00000004054	Map3k11	2610017K16Rik|Mlk3|PTK1|SPRK	mitogen-activated protein kinase kinase kinase 11	protein-coding
common_peak1-11705-44-61--0.13230347581834-0.330479330879757	chr16	32002219	32003945	+	0	NA	5' UTR (NM_177103, exon 1 of 10)	5' UTR (NM_177103, exon 1 of 10)	291	NM_177103	320213	Mm.152890	NM_023801		Senp5	6230429P13Rik|A730063F07Rik|AI851888|BB189556|SMT3IP3	SUMO/sentrin specific peptidase 5	protein-coding
common_peak1-13449-61-51-0.682309611608249-1.97656708196216	chr19	56821397	56822643	+	0	NA	Intergenic	MTE2b|LTR|MaLR	25158	NM_007419	11554	Mm.46797	NM_007419	ENSMUSG00000035283	Adrb1	Adrb-1|beta-AR	adrenergic receptor, beta 1	protein-coding
common_peak1-14424-16-17--0.0516613591742505-0.301029995663984	chr2	180225295	180226238	+	0	NA	Intergenic	Intergenic	-8915	NM_018766	18216	Mm.301712	NM_018766	ENSMUSG00000027568	Ntsr1	NT-1R|NTR-1|NTR1	neurotensin receptor 1	protein-coding
common_peak1-8639-13-16--0.30899081061257-0.330004445983672	chr10	121904664	121905233	+	0	NA	Intergenic	Lx2|LINE|L1	19393	NM_016847	54140	Mm.4351	NM_016847	ENSMUSG00000020123	Avpr1a	AVPR|Avpr1|V1a|V1aR	arginine vasopressin receptor 1A	protein-coding
common_peak1-9603-64-71-0.295521400266291-0.696474447554397	chr11	120252389	120254051	+	0	NA	intron (NM_199469, intron 12 of 15)	intron (NM_199469, intron 12 of 15)	-13160	NM_027980	71885	Mm.274890	NM_027980	ENSMUSG00000025384	2310003H01Rik	Faap100	RIKEN cDNA 2310003H01 gene	protein-coding
common_peak2-27862-32-55--0.528262902837944-0.895298945923416	chr3	155092775	155093884	+	0	NA	Intergenic	Intergenic	336931	NM_028938	74435	Mm.195711	NM_028938	ENSMUSG00000028182	Lrriq3	4930438B07Rik|4930511J15Rik|4933403H06Rik|BB020367|Lrrc44	leucine-rich repeats and IQ motif containing 3	protein-coding
unique_peak2-35688-7-15--1.20090916970181-0.947446088118041	chr18	20782052	20782568	+	0	NA	Intergenic	Intergenic	-41441	NM_013697	22139	Mm.2108	NM_013697	ENSMUSG00000061808	Ttr	AA408768|AI787086|D17860|prealbumin	transthyretin	protein-coding
unique_peak2-34713-8-10--0.454209200689727-1.078512453669	chr15	34495333	34495864	+	0	NA	Intergenic	Intergenic	70532	NM_152894	67724	Mm.248779	NM_026340	ENSMUSG00000022325	Pop1	4932434G09Rik	processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae)	protein-coding
common_peak2-29492-13-8-0.608547029195456-0.660903317613904	chr6	31218100	31218370	+	0	NA	intron (NR_040257, intron 2 of 7)	intron (NR_040257, intron 2 of 7)	47884	NR_040261	73652	Mm.441297	NR_040257	ENSMUSG00000087380	2210408F21Rik	-	RIKEN cDNA 2210408F21 gene	ncRNA
common_peak1-9626-57-40-0.908481035460845-2.88597915544846	chr11	121719901	121721505	+	0	NA	Intergenic	MurSatRep1|Unknown|Unknown	29171	NM_029049	74675	Mm.61213	NM_029049	ENSMUSG00000039198	Ptchd3	4930451E13Rik|4933440L20Rik|RNDEu-3	patched domain containing 3	protein-coding
common_peak2-30936-35-41-0.0390528356837434-0.311371317671728	chr8	106168156	106169471	+	0	NA	intron (NR_045730, intron 3 of 4)	intron (NR_045730, intron 3 of 4)	41114	NR_045730	71058	Mm.67707	NR_045730		4933400L20Rik	-	RIKEN cDNA 4933400L20 gene	ncRNA
common_peak1-7820-43-22-1.25900122946669-3.47380072378139	chr1	125687367	125689589	+	0	NA	intron (NM_199021, intron 3 of 25)	RMER1A|Other|Other	253658	NM_199021	269109	Mm.483255	NM_199021	ENSMUSG00000036815	Dpp10	6430601K09Rik|DPP X|Dprp3	dipeptidylpeptidase 10	protein-coding
common_peak1-8295-11-26--1.24619391791185-1.66030262873422	chr10	34019020	34019502	+	0	NA	3' UTR (NM_030203, exon 1 of 1)	3' UTR (NM_030203, exon 1 of 1)	2034	NM_030203	72480	Mm.21485	NM_030203	ENSMUSG00000039485	Tspyl4	2610102M01Rik|B230210I21Rik|D10Bwg0791e	TSPY-like 4	protein-coding
unique_peak1-2281-8-1-2.00522241794757-2.05605744720049	chr15	79361213	79361733	+	0	NA	intron (NM_001040187, intron 12 of 12)	B2_Mm2|SINE|B2	1874	NM_152806	67040	Mm.29644	NM_152806	ENSMUSG00000055065	Ddx17	2610007K22Rik|A430025E01Rik|AI047725|C80929|Gm926|p72	DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	protein-coding
common_peak2-27761-10-17--0.813509656433543-0.699649909729472	chr3	129724791	129725447	+	0	NA	intron (NM_207209, intron 3 of 23)	intron (NM_207209, intron 3 of 23)	38706	NM_207209	99683	Mm.192303	NM_207209	ENSMUSG00000001052	Sec24b	AI605202|SEC24	Sec24 related gene family, member B (S. cerevisiae)	protein-coding
common_peak2-29018-31-50--0.447186671158372-0.724428647890298	chr5	112323732	112324708	+	0	NA	Intergenic	Intergenic	-133472	NR_045833	269683	Mm.136946	NM_207252	ENSMUSG00000085271	E130006D01Rik	Gm16018|Gm681|OTTMUSG00000029083	RIKEN cDNA E130006D01 gene	ncRNA
common_peak1-7609-35-41-0.0390528356837434-0.311371317671728	chr1	58795234	58796364	+	0	NA	intron (NM_207653, intron 6 of 9)	B4A|SINE|B4	8403	NM_001293805	12633	Mm.336848	NM_009805	ENSMUSG00000026031	Cflar	2310024N18Rik|A430105C05Rik|CLARP|Cash|Casper|ENSMUSG00000072980|FLAME|FLAME-1|Flip|Gm9845|I-FLICE|MRIT|c-Flip	CASP8 and FADD-like apoptosis regulator	protein-coding
common_peak1-9618-170-187-0.603683647972497-4.8339642729739	chr11	120990368	120991741	+	0	NA	Intergenic	Intergenic	-11063	NM_027622	70956	Mm.158506	NM_027622	ENSMUSG00000039337	Tex19.2	4921530G04Rik|Tex19b	testis expressed gene 19.2	protein-coding
unique_peak2-38012-2-6--1.72480917832092-1.26211192963361	chr6	31108072	31108518	+	0	NA	intron (NR_110471, intron 2 of 3)	intron (NR_110471, intron 2 of 3)	60179	NR_110470	232685	Mm.443019	NM_144555		Lincpint	MNCb-1768|Pint|linc-Pint	long intergenic non-protein coding RNA, Trp53 induced transcript	ncRNA
common_peak1-19016-32-10-1.81966040058236-4.28341153583535	chr9	62857614	62859013	+	0	NA	Intergenic	Intergenic	-29627	NM_019663	56469	Mm.431253	NM_019663	ENSMUSG00000032405	Pias1	2900068C24Rik|Ddxbp1|GBP	protein inhibitor of activated STAT 1	protein-coding
unique_peak1-3453-39-14-1.70887065131063-4.77286552781164	chr19	8967150	8968391	+	0	NA	intron (NM_176843, intron 1 of 1)	CpG	293	NM_176843	109077	Mm.290474	NM_176843	ENSMUSG00000071652	Ints5	1110055N21Rik|mKIAA1698	integrator complex subunit 5	protein-coding
unique_peak2-34621-7-11--0.785871670422967-1.21681515183528	chr14	76580239	76580838	+	0	NA	Intergenic	MTB|LTR|MaLR	69840	NM_013745	27275	Mm.21138	NM_013745	ENSMUSG00000022009	Nufip1	Nufip	nuclear fragile X mental retardation protein interacting protein 1	protein-coding
common_peak2-21285-12-8-0.478850983645327-0.562038191119709	chr11	70540018	70540689	+	0	NA	intron (NM_153103, intron 22 of 22)	intron (NM_153103, intron 22 of 22)	20861	NR_105890	102465557		NR_105890		Mir6925	mmu-mir-6925	microRNA mir-6925	ncRNA
common_peak2-20670-25-18-0.613922391901521-0.86528749982161	chr10	85102032	85102799	+	0	NA	intron (NM_028709, intron 11 of 16)	ORR1E|LTR|MaLR	41259	NM_001017525	74007	Mm.36544	NM_028709	ENSMUSG00000020042	Btbd11	6330404E16Rik	BTB (POZ) domain containing 11	protein-coding
common_peak1-10957-17-20--0.174021084573723-0.306598483909156	chr15	25939956	25940753	+	0	NA	Intergenic	Intergenic	26233	NM_144523	52521	Mm.29145	NM_144523	ENSMUSG00000052253	Zfp622	1110033B05Rik|D15Ertd806e|ZPR9|Znf622	zinc finger protein 622	protein-coding
common_peak2-23993-33-46--0.223251289152109-0.392002726290462	chr16	18811612	18813075	+	0	NA	promoter-TSS (NM_009862)	promoter-TSS (NM_009862)	-44	NR_028403	22230	Mm.237594	NM_011672	ENSMUSG00000005262	Ufd1l	Ufd1	ubiquitin fusion degradation 1 like	protein-coding
common_peak1-10899-37-62--0.451286852014098-0.817648941027521	chr15	102005957	102007222	+	0	NA	TTS (NM_144942)	TTS (NM_144942)	12885	NM_144942	246277	Mm.296382	NM_144942	ENSMUSG00000023044	Csad	Csd	cysteine sulfinic acid decarboxylase	protein-coding
unique_peak1-118-9-5-0.604650905683064-1.21398586181642	chr1	60573247	60573823	+	0	NA	intron (NM_001045513, intron 4 of 13)	intron (NM_001045513, intron 4 of 13)	50074	NM_001045513	77300	Mm.440325	NM_001045513	ENSMUSG00000026014	Raph1	9430025M21Rik|C730009O10Rik|Lpd	Ras association (RalGDS/AF-6) and pleckstrin homology domains 1	protein-coding
common_peak2-25202-11-5-0.923731083530457-1.477227296591	chr18	60623920	60624208	+	0	NA	Intergenic	MERVK26-int|LTR|ERVK	37573	NM_134133	106878	Mm.273197	NM_134133	ENSMUSG00000038059	Smim3	2010002N04Rik|AI195350|AW561905|Nid67|cI-41	small integral membrane protein 3	protein-coding
unique_peak1-2563-11-4-1.18676548936425-1.68134727924692	chr16	25262239	25262944	+	0	NA	Intergenic	Intergenic	-24312	NM_175165	71338	Mm.126851	NM_175165	ENSMUSG00000048399	Tprg	5430420C16Rik|Tprg1	transformation related protein 63 regulated	protein-coding
common_peak1-18847-11-22--1.0148683718054-1.11267835143409	chr9	19622002	19622569	+	0	NA	Intergenic	Intergenic	9521	NM_146526	258519	Mm.491770	NM_146526	ENSMUSG00000095448	Olfr859	MOR146-3	olfactory receptor 859	protein-coding
common_peak2-21264-70-96-0.0200540741882707-0.305507337675529	chr11	69671308	69672398	+	0	NA	intron (NM_031880, intron 2 of 13)	intron (NM_031880, intron 2 of 13)	379	NM_031880	83813	Mm.28874	NM_031880	ENSMUSG00000001583	Tnk1	Kos1|Tnk1a|Tnk1b	tyrosine kinase, non-receptor, 1	protein-coding
common_peak1-7954-21-16-0.482026424015896-0.650819692678078	chr1	153749141	153750074	+	0	NA	intron (NM_197990, intron 5 of 5)	intron (NM_197990, intron 5 of 5)	147103	NM_001039644	66967	Mm.337691	NM_001039644	ENSMUSG00000043019	Edem3	2310050N11Rik	ER degradation enhancer, mannosidase alpha-like 3	protein-coding
common_peak1-17221-17-13-0.410941416147434-0.546772548767014	chr6	125493709	125494475	+	0	NA	Intergenic	ID4|SINE|ID	-8874	NM_011708	22371	Mm.22339	NM_011708	ENSMUSG00000001930	Vwf	6820430P06Rik|AI551257|B130011O06Rik|C630030D09|F8VWF|VWD	Von Willebrand factor homolog	protein-coding
common_peak1-18496-13-16--0.30899081061257-0.330004445983672	chr8	85432114	85432819	+	0	NA	intron (NM_177378, intron 1 of 6)	intron (NM_177378, intron 1 of 6)	45211	NM_177378	330812	Mm.491438	NM_177378	ENSMUSG00000047747	Rnf150	A630007N06Rik|C030044C12Rik|Greul5|mKIAA1214	ring finger protein 150	protein-coding
unique_peak1-7384-10-1-2.35641534500877-2.57096726280955	chrX	75757758	75758453	+	0	NA	intron (NM_027322, intron 2 of 3)	IAP-d-int|LTR|ERVK	71039	NM_001164275	546336	Mm.211712	NM_027322	ENSMUSG00000047996	Prrg1	2010007L08Rik	proline rich Gla (G-carboxyglutamic acid) 1	protein-coding
common_peak2-21701-10-9-0.0344872501214071-1.05503135781948	chr11	106778829	106779396	+	0	NA	intron (NM_025481, intron 1 of 18)	intron (NM_025481, intron 1 of 18)	2917	NM_025481	66313	Mm.340955	NM_025481	ENSMUSG00000018363	Smurf2	2810411E22Rik|AI558114|AI649275	SMAD specific E3 ubiquitin protein ligase 2	protein-coding
unique_peak1-7389-11-1-2.50869358425161-2.83420869758413	chrX	98898242	98898754	+	0	NA	Intergenic	Intergenic	30988	NM_009910	12766	Mm.12876	NM_009910	ENSMUSG00000050232	Cxcr3	Cd183|Cmkar3	chemokine (C-X-C motif) receptor 3	protein-coding
unique_peak1-4481-18-1-3.31291915122835-4.8766546284749	chr3	60751354	60752092	+	0	NA	Intergenic	ORR1E|LTR|MaLR	-54984	NM_008772	18441	Mm.281452	NM_008772	ENSMUSG00000027765	P2ry1	P2Y1	purinergic receptor P2Y, G-protein coupled 1	protein-coding
unique_peak1-3815-14-6-1.09186123830004-1.16633110333236	chr2	28590080	28590784	+	0	NA	intron (NM_001033874, intron 7 of 12)	intron (NM_001033874, intron 7 of 12)	1634	NR_037271	100526498		NR_037271		Mir3088	mmu-mir-3088	microRNA 3088	ncRNA
unique_peak2-35334-2-16--3.00491709751366-3.53487848679804	chr17	23679542	23680207	+	0	NA	Intergenic	Intergenic	21319	NM_001033496	449521	Mm.268582	NM_001033496	ENSMUSG00000071256	Zfp213	BC038178|D17Ertd197e	zinc finger protein 213	protein-coding
common_peak2-31062-7-6--0.00826409175941478-0.97990265578305	chr8	20967109	20967379	+	0	NA	Intergenic	Intergenic	-946852	NR_028428	381598	Mm.359054	NM_001024708	ENSMUSG00000071793	2610005L07Rik	2810038F24Rik|6720476A01Rik	cadherin 11 pseudogene	pseudo
unique_peak1-6087-9-2-1.60465090568306-1.87199725847353	chr6	123868450	123869000	+	0	NA	Intergenic	Intergenic	-65517	NM_001104641	545874	Mm.347595	NM_001104641	ENSMUSG00000094672	Vmn2r25	EG545874	vomeronasal 2, receptor 25	protein-coding
unique_peak2-37994-9-14--0.717277189204299-0.53895475198017	chr6	24526955	24527792	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-20398	NM_053098	93677	Mm.332941	NM_053098	ENSMUSG00000029683	Lmod2	C-Lmod	leiomodin 2 (cardiac)	protein-coding
common_peak2-24962-90-94-0.484449417611204-1.76325591554289	chr18	5333605	5335055	+	0	NA	intron (NM_178722, intron 1 of 4)	CpG	107	NM_178722	240186	Mm.118257	NM_178722	ENSMUSG00000050945	Zfp438	9430031G09|9430091M14Rik|B830013J05Rik	zinc finger protein 438	protein-coding
common_peak1-15920-16-15-0.118263642268062-0.328191099940264	chr5	24423841	24424693	+	0	NA	intron (NM_145401, intron 4 of 15)	B3|SINE|B2	-9940	NM_001170556	108099	Mm.33649	NM_145401	ENSMUSG00000028944	Prkag2	2410051C13Rik|AAKG|AAKG2|AI854673|H91620p|WPWS	protein kinase, AMP-activated, gamma 2 non-catalytic subunit	protein-coding
unique_peak1-4543-10-5-0.771452844287613-1.33892459842472	chr3	37769467	37770040	+	0	NA	Intergenic	Intergenic	-27982	NR_040559	626410	Mm.389417	NR_040559		Gm20755	-	predicted gene, 20755	ncRNA
common_peak1-8971-12-8-0.478850983645327-0.562038191119709	chr11	58199134	58199832	+	0	NA	intron (NM_001083884, intron 5 of 6)	Charlie1b|DNA|MER1_type	6949	NM_001083884	70163	Mm.24119	NM_027339	ENSMUSG00000013643	Lypd8	2210415F13Rik	LY6/PLAUR domain containing 8	protein-coding
common_peak1-16939-11-12--0.191746133889479-0.310474156842889	chr6	83349376	83350005	+	0	NA	intron (NM_183138, intron 3 of 10)	intron (NM_183138, intron 3 of 10)	1406	NR_105793	102465194		NR_105793		Mir6374	mmu-mir-6374	microRNA mir-6374	ncRNA
common_peak1-10061-14-19--0.422711934529718-0.403453972741636	chr13	21715633	21716360	+	0	NA	Intergenic	Lx7|LINE|L1	-12123	NM_146744	258739	Mm.377667	NM_146744	ENSMUSG00000051258	Olfr1362	MOR256-8|Olfr1363-ps1	olfactory receptor 1362	protein-coding
unique_peak2-39339-3-6--1.22133801201688-1.08602067057793	chr9	4308941	4309302	+	0	NA	promoter-TSS (NM_026962)	promoter-TSS (NM_026962)	373	NM_026276	67618	Mm.33970	NM_026276	ENSMUSG00000025894	Aasdhppt	2010309J24Rik|2810407B07Rik|AASD-PPT|CGI-80|LYS2|LYS5	aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase	protein-coding
common_peak1-12433-10-10--0.103016273628528-0.301029995663987	chr17	78403479	78404150	+	0	NA	Intergenic	Intergenic	-195774	NM_015800	50766	Mm.311912	NM_015800	ENSMUSG00000024074	Crim1	AU015004	cysteine rich transmembrane BMP regulator 1 (chordin like)	protein-coding
common_peak1-16271-38-49--0.0724035304761941-0.303268666669768	chr5	108268213	108269434	+	0	NA	intron (NM_007964, intron 2 of 17)	B1_Mm|SINE|Alu	9642	NM_001276397	73318	Mm.441500	NM_028502		Ube2d2b	1700013N18Rik	ubiquitin-conjugating enzyme E2D 2B	protein-coding
common_peak1-8199-22-52--1.08063634947579-2.40122790931992	chr10	4107273	4108215	+	0	NA	Intergenic	Intergenic	-316397	NM_001161822	56533	Mm.44606	NM_019958	ENSMUSG00000019775	Rgs17	6430507P11Rik|Rgsz2	regulator of G-protein signaling 17	protein-coding
common_peak1-13238-73-74-0.463576315929341-1.33745248687389	chr19	29250345	29252357	+	0	NA	Intergenic	Intergenic	41582	NR_029778	724062		NR_029778		Mir101b	Mirn101b|mir-101b	microRNA 101b	ncRNA
common_peak1-7885-20-38--0.797327434271056-1.23883036201157	chr1	134361386	134362268	+	0	NA	3' UTR (NM_172516, exon 13 of 13)	3' UTR (NM_172516, exon 13 of 13)	-12117	NM_172517	213464	Mm.132868	NM_172517	ENSMUSG00000026439	Rbbp5	4933411J24Rik|C330016J05	retinoblastoma binding protein 5	protein-coding
unique_peak1-1878-20-6-1.68071986253359-2.41165147706372	chr14	60426979	60427787	+	0	NA	intron (NM_015803, intron 26 of 35)	intron (NM_015803, intron 26 of 35)	183265	NM_145463	219134	Mm.275409	NM_145463	ENSMUSG00000044461	Shisa2	9430059P22Rik|MAd2|Tmem46|mShisa|shisa	shisa homolog 2 (Xenopus laevis)	protein-coding
common_peak2-26388-24-35--0.376715098674596-0.470271536760928	chr2	51934518	51935384	+	0	NA	intron (NM_175238, intron 7 of 35)	intron (NM_175238, intron 7 of 35)	6594	NM_175238	51869	Mm.254530	NM_175238	ENSMUSG00000036202	Rif1	5730435J01Rik|6530403D07Rik|AU016181|AW549474|D2Ertd145e	Rap1 interacting factor 1 homolog (yeast)	protein-coding
common_peak2-23211-39-45-0.0921992908621405-0.338002390994162	chr15	103365874	103367030	+	0	NA	intron (NM_021391, intron 1 of 6)	intron (NM_021391, intron 1 of 6)	1971	NM_021391	58200	Mm.143788	NM_021391	ENSMUSG00000022490	Ppp1r1a	0610038N18Rik|I-1	protein phosphatase 1, regulatory (inhibitor) subunit 1A	protein-coding
unique_peak2-36207-3-6--1.22133801201688-1.08602067057793	chr2	32901422	32901822	+	0	NA	intron (NM_178888, intron 6 of 28)	intron (NM_178888, intron 6 of 28)	41102	NM_178888	99326	Mm.41290	NM_178888	ENSMUSG00000038860	Garnl3	AW120551	GTPase activating RANGAP domain-like 3	protein-coding
unique_peak1-14-7-3-0.799090830298189-1.23214870625617	chr1	149913163	149913659	+	0	NA	Intergenic	Lx2B|LINE|L1	1568594	NM_001145807	215378	Mm.441817	NM_153539	ENSMUSG00000035131	Brinp3	B830045N13Rik|Fam5c	bone morphogenetic protein/retinoic acid inducible neural specific 3	protein-coding
unique_peak1-5252-10-2-1.77145284428761-2.09384600808989	chr5	53568450	53568960	+	0	NA	intron (NM_172710, intron 6 of 23)	intron (NM_172710, intron 6 of 23)	35986	NM_172710	231238	Mm.235020	NM_172710	ENSMUSG00000029189	Sel1l3	2310045A20Rik|AI429585|mKIAA0746	sel-1 suppressor of lin-12-like 3 (C. elegans)	protein-coding
common_peak2-28905-12-21--0.810655633549659-0.713635438203849	chr5	92042613	92043317	+	0	NA	intron (NM_145562, intron 3 of 3)	intron (NM_145562, intron 3 of 3)	96239	NM_145562	231440	Mm.5002	NM_145562		Parm1	2210012L08Rik|9130213B05Rik|W91666	prostate androgen-regulated mucin-like protein 1	protein-coding
unique_peak1-7359-10-7-0.356415345008769-1.12966497611638	chrX	21062144	21062790	+	0	NA	intron (NM_007429, intron 2 of 2)	intron (NM_007429, intron 2 of 2)	717	NM_007429	11609	Mm.2679	NM_007429	ENSMUSG00000068122	Agtr2	AI316812|AW107640	angiotensin II receptor, type 2	protein-coding
common_peak2-30922-24-34--0.33607311417725-0.427313034957882	chr7	144938184	144939429	+	0	NA	Intergenic	Intergenic	309449	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
common_peak2-20423-21-20-0.177171842487475-0.380101753845079	chr10	26374024	26374899	+	0	NA	Intergenic	LTRIS_Mus|LTR|ERV1	19996	NR_033633	667572	Mm.482728	NR_033633	ENSMUSG00000098179	Gm8709	EG667572	glyceraldehyde-3-phosphate dehydrogenase pseudogene	pseudo
unique_peak1-64-10-5-0.771452844287613-1.33892459842472	chr1	36250886	36251420	+	0	NA	intron (NM_198899, intron 13 of 40)	B1_Mur2|SINE|Alu	49994	NM_198899	320011	Mm.261022	NM_198899	ENSMUSG00000037470	Uggt1	0910001L17Rik|A930007H10Rik|AA589501|AI414429|AI448372|C820010P03Rik|GT|UGT1|Ugcgl1	UDP-glucose glycoprotein glucosyltransferase 1	protein-coding
unique_peak1-3140-10-5-0.771452844287613-1.33892459842472	chr18	36411565	36412070	+	0	NA	Intergenic	Intergenic	-28999	NM_008989	19290	Mm.231802	NM_008989		Pura	CAGER-1|Pur-alpha|ssCRE-BP	purine rich element binding protein A	protein-coding
unique_peak1-3976-15-1-3.01216475055566-4.18809100057339	chr2	32633491	32634290	+	0	NA	TTS (NM_178595)	TTS (NM_178595)	2549	NM_178595	329384	Mm.268037	NM_178595	ENSMUSG00000053746	Ptrh1	2210013M04Rik|AW046744	peptidyl-tRNA hydrolase 1 homolog (S. cerevisiae)	protein-coding
common_peak1-9321-20-21-0.0286431659538957-0.306080386793804	chr11	94653658	94654329	+	0	NA	intron (NM_001163172, intron 2 of 4)	intron (NM_001163172, intron 2 of 4)	-9976	NM_001034896	544806	Mm.379774	NM_001034896	ENSMUSG00000075610	Tmem92	AU016430|Tmem92-ps	transmembrane protein 92	protein-coding
common_peak2-30301-18-40--1.04463285338973-1.77675427888235	chr7	19628988	19629836	+	0	NA	intron (NM_026605, intron 13 of 26)	B3|SINE|B2	-10624	NM_031255	83434	Mm.84435	NM_031255	ENSMUSG00000040866	Rsph6a	RSP4|Rshl1	radial spoke head 6 homolog A (Chlamydomonas)	protein-coding
common_peak2-20801-3-8--1.58390809140159-1.39487600375387	chr10	123197101	123197558	+	0	NA	Intergenic	Intergenic	496197	NM_001252387	268354	Mm.51939	NM_182807	ENSMUSG00000044071	Fam19a2	6330575M02|FAM19A2 TAFA-2|TAFA2|Tafa-2	family with sequence similarity 19, member A2	protein-coding
common_peak1-17647-14-8-0.729291158915332-0.771068449301682	chr7	55794146	55794644	+	0	NA	Intergenic	L1Md_F2|LINE|L1	19061	NM_175531	243979	Mm.83689	NM_175531	ENSMUSG00000050425	Mrgprb2	4833406I20Rik|Mgrg14	MAS-related GPR, member B2	protein-coding
unique_peak1-3789-6-6--0.241956811677302-0.947717972411649	chr19	56038119	56038611	+	0	NA	Intergenic	Intergenic	68554	NM_001142924	21416	Mm.139815	NM_009333	ENSMUSG00000024985	Tcf7l2	TCF4B|TCF4E|Tcf-4|Tcf4|mTcf-4B|mTcf-4E	transcription factor 7 like 2, T cell specific, HMG box	protein-coding
unique_peak2-36509-11-19--0.813234510635749-0.769930178837768	chr2	157375813	157376633	+	0	NA	Intergenic	Intergenic	-9591	NM_001291129	18111	Mm.34330	NM_010923	ENSMUSG00000067786	Nnat	5730414I02Rik|AW107673|Peg5	neuronatin	protein-coding
unique_peak1-2192-18-5-1.7279566505072-2.39372960542229	chr15	64622145	64623177	+	0	NA	intron (NM_001291903, intron 5 of 16)	intron (NM_001291903, intron 5 of 16)	131197	NM_001291903	11514	Mm.1425	NM_009623	ENSMUSG00000022376	Adcy8	AC8|AW060868	adenylate cyclase 8	protein-coding
common_peak1-9546-11-7-0.508693584251613-1.21681515183528	chr11	116671666	116672185	+	0	NA	intron (NM_026280, intron 3 of 3)	intron (NM_026280, intron 3 of 3)	17435	NM_026280	67622	Mm.64962	NM_026280	ENSMUSG00000020814	Mxra7	1810057P16Rik|E130302J09Rik	matrix-remodelling associated 7	protein-coding
unique_peak2-37390-3-8--1.58390809140159-1.39487600375387	chr4	140665532	140665950	+	0	NA	intron (NM_177867, intron 12 of 14)	ID_B1|SINE|B4	21481	NM_177867	329972	Mm.247201	NM_177867	ENSMUSG00000045004	Spata21	4933414G08	spermatogenesis associated 21	protein-coding
common_peak1-16561-9-40--2.16793859821386-4.9024740998743	chr5	145205308	145205944	+	0	NA	Intergenic	RMER15|LTR|ERVL	86232	NR_102373	100579137		NR_102372		Dmr	-	Dmrt1 related	ncRNA
common_peak2-26734-13-16--0.30899081061257-0.330004445983672	chr2	131903123	131903623	+	0	NA	intron (NM_018824, intron 6 of 15)	intron (NM_018824, intron 6 of 15)	-47649	NM_175445	215653	Mm.204737	NM_175445	ENSMUSG00000027339	Rassf2	3830431H01Rik|9030412M04Rik|AI852669|AW495050	Ras association (RalGDS/AF-6) domain family member 2	protein-coding
common_peak1-18485-13-11-0.193509529916613-0.379391706698377	chr8	84981520	84982037	+	0	NA	Intergenic	RMER13B|LTR|ERVK	-55293	NM_008357	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak1-17959-43-50-0.110137843552208-0.352751277022878	chr7	129591654	129592770	+	0	NA	intron (NM_008855, intron 3 of 16)	B3|SINE|B2	159573	NM_008855	18751	Mm.207496	NM_008855	ENSMUSG00000052889	Prkcb	A130082F03Rik|PKC-Beta|Pkcb|Prkcb1|Prkcb2	protein kinase C, beta	protein-coding
unique_peak1-3162-23-2-3.13680500378792-5.60081203524255	chr18	38171526	38172556	+	0	NA	Intergenic	Intergenic	-13418	NM_001205336	106952	Mm.247642	NM_139206	ENSMUSG00000024451	Arap3	Centd3|Drag1|E030006K04Rik|cnt-d3	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3	protein-coding
common_peak2-25310-8-7-0.00522241794757061-1.00793137938329	chr18	75280317	75280648	+	0	NA	intron (NM_027727, intron 10 of 16)	intron (NM_027727, intron 10 of 16)	102056	NM_027727	69190	Mm.173826	NM_027727	ENSMUSG00000035765	Dym	1810041M12Rik|4933427L07Rik|C030019K18Rik	dymeclin	protein-coding
unique_peak2-40004-2-6--1.72480917832092-1.26211192963361	chrX	169936949	169937367	+	0	NA	Intergenic	Intergenic	-3520309	NR_029457	654820	Mm.34441	NM_001039559	ENSMUSG00000072844	G530011O06Rik	-	RIKEN cDNA G530011O06 gene	ncRNA
common_peak2-20218-58-73-0.0864965692615467-0.352472969721833	chr1	180640663	180642152	+	0	NA	intron (NM_001161665, intron 3 of 14)	intron (NM_001161665, intron 3 of 14)	182151	NM_001161665	269152	Mm.129727	NM_177724	ENSMUSG00000026494	Kif26b	4832420M10|BC056349|D230039L06Rik	kinesin family member 26B	protein-coding
common_peak1-12234-29-31-0.112290080615111-0.353704024845522	chr17	35125758	35127027	+	0	NA	Intergenic	MYSERV6-int|LTR|ERVK	7317	NM_030597	27756	Mm.165735	NM_030597	ENSMUSG00000007050	Lsm2	D17H6S56E-2|D17H6S56E2|Dmapl|Dmpkap|G7b|Sm-X5|SmX5|snRNP	LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	protein-coding
unique_peak1-4643-7-0-2.79909083029819-2.40823996531185	chr3	88284649	88284889	+	0	NA	TTS (NM_001002011)	TTS (NM_001002011)	12465	NM_019390	16905	Mm.243014	NM_019390	ENSMUSG00000028063	Lmna	Dhe	lamin A	protein-coding
common_peak2-26531-49-51-0.305844104884092-0.62082517231999	chr2	91648993	91650226	+	0	NA	intron (NM_172669, intron 8 of 17)	intron (NM_172669, intron 8 of 17)	79314	NM_001080754	228361	Mm.436667	NM_172669	ENSMUSG00000040506	Ambra1	2310079H06Rik|A130023A14|AA474864|AV021921|D030051N19Rik|mKIAA1736	autophagy/beclin 1 regulator 1	protein-coding
common_peak1-15674-76-120--0.156918851411313-0.415811348124245	chr4	137356710	137357946	+	0	NA	Intergenic	Intergenic	-5029	NM_007431	11647	Mm.288186	NM_007431	ENSMUSG00000028766	Alpl	APTNAP|Akp-2|Akp2|TNAP|TNSALP	alkaline phosphatase, liver/bone/kidney	protein-coding
unique_peak1-3465-41-16-1.61368586359832-4.65855722829497	chr19	9974436	9975891	+	0	NA	Intergenic	Lx7|LINE|L1	-1140	NM_016692	16319	Mm.29755	NM_016692	ENSMUSG00000024660	Incenp	2700067E22Rik|AU019509|C130081E20|C77457	inner centromere protein	protein-coding
unique_peak2-33422-4-7--1.02346051385325-1.09384600808989	chr11	60179099	60179505	+	0	NA	intron (NM_029044, intron 5 of 13)	MIRc|SINE|MIR	12420	NM_029044	74665	Mm.133570	NM_029044	ENSMUSG00000056598	Lrrc48	4930449E07Rik	leucine rich repeat containing 48	protein-coding
common_peak1-7814-12-7-0.648775985087639-0.697979855752659	chr1	125450264	125450833	+	0	NA	intron (NM_199021, intron 5 of 25)	MIRm|SINE|MIR	491588	NM_199021	269109	Mm.483255	NM_199021	ENSMUSG00000036815	Dpp10	6430601K09Rik|DPP X|Dprp3	dipeptidylpeptidase 10	protein-coding
common_peak2-30904-18-22--0.210642804828661-0.321718508207525	chr7	143052807	143053705	+	0	NA	Intergenic	Intergenic	-145194	NM_001081117	17345	Mm.4078	NM_001081117	ENSMUSG00000031004	Mki67	D630048A14Rik|Ki-67|Ki67	antigen identified by monoclonal antibody Ki 67	protein-coding
unique_peak1-4006-7-4-0.477162735410827-1.09384600808989	chr2	35679975	35680387	+	0	NA	intron (NM_029774, intron 6 of 9)	(CA)n|Simple_repeat|Simple_repeat	5471	NR_040618	77665	Mm.400558	NR_040618	ENSMUSG00000086449	9030204H09Rik	-	RIKEN cDNA 9030204H09 gene	ncRNA
common_peak1-14829-85-149--0.273415442371229-0.798859123350393	chr3	90612700	90615144	+	0	NA	Intergenic	L1_Mus1|LINE|L1	83094	NM_207263	384997	Mm.316644	NM_207263	ENSMUSG00000042250	Pglyrp4	Gm1478|Gm413	peptidoglycan recognition protein 4	protein-coding
unique_peak1-468-11-3-1.50869358425161-1.95434855131066	chr1	171439666	171440178	+	0	NA	intron (NM_023284, intron 10 of 13)	intron (NM_023284, intron 10 of 13)	21673	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
unique_peak1-5486-15-7-1.01216475055566-1.08658567012551	chr5	131815296	131815942	+	0	NA	Intergenic	RMER13A|LTR|ERVK	-32227	NM_145218	212996	Mm.299204	NM_145218		Wbscr17	AA388321|E330012B09Rik	Williams-Beuren syndrome chromosome region 17 homolog (human)	protein-coding
common_peak1-18158-24-35--0.376715098674596-0.470271536760928	chr8	13104159	13105393	+	0	NA	promoter-TSS (NM_146207)	promoter-TSS (NM_146207)	567	NM_178708	234069	Mm.103427	NM_178708	ENSMUSG00000038542	Pcid2	A730042J05Rik	PCI domain containing 2	protein-coding
common_peak2-28014-14-18--0.348711353085941-0.360333814299795	chr4	46639324	46640085	+	0	NA	intron (NM_198664, intron 5 of 12)	intron (NM_198664, intron 5 of 12)	23367	NM_198664	381605	Mm.331595	NM_198664	ENSMUSG00000039813	Tbc1d2	A630005A06Rik|BC022630|Gm1037|PARIS-1|PARIS1	TBC1 domain family, member 2	protein-coding
common_peak1-18658-38-51--0.128987058842561-0.320773676263618	chr8	116921113	116922128	+	0	NA	Intergenic	MMERVK10C-int|LTR|ERVK	-20314	NM_001007223	403395	Mm.81117	NM_001007223		Clec3a	1110019O10Rik|Clecsf1|Gm796	C-type lectin domain family 3, member a	protein-coding
unique_peak2-39754-8-14--0.901668177660948-0.660903317613906	chrX	36863682	36864374	+	0	NA	Intergenic	RLTR25A|LTR|ERVK	164585	NM_001177380	78631	Mm.243738	NM_001177380	ENSMUSG00000079619	Cypt15	1700085A12Rik	cysteine-rich perinuclear theca 15	protein-coding
common_peak2-27710-13-10-0.319040412000471-0.446472590016315	chr3	122364358	122364767	+	0	NA	Intergenic	L1MA4A|LINE|L1	-41930	NM_153118	214459	Mm.209491	NM_153118	ENSMUSG00000039735	Fnbp1l	2610318I01Rik|AW548221|TOCA1|toca-1	formin binding protein 1-like	protein-coding
unique_peak2-39991-4-6--0.830815435910851-0.989110657569874	chrX	160604044	160604406	+	0	NA	intron (NM_001130513, intron 8 of 18)	L1MA6|LINE|L1	25813	NM_027286	70008	Mm.13451	NM_027286	ENSMUSG00000015405	Ace2	2010305L05Rik	angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	protein-coding
unique_peak1-4043-19-3-2.40268732666169-3.59864904409227	chr2	59422164	59423081	+	0	NA	Intergenic	Intergenic	-27477	NM_198294	66860	Mm.27917	NM_198294	ENSMUSG00000035168	Tanc1	1200003E16Rik|Tanc|mKIAA1728	tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1	protein-coding
common_peak1-19141-24-56--1.03968011139702-2.36704399216973	chr9	85748804	85749610	+	0	NA	Intergenic	B4A|SINE|B4	12748	NM_001164792	21983	Mm.20864	NM_011627	ENSMUSG00000035274	Tpbg	5T4|AW495680|WAIF1	trophoblast glycoprotein	protein-coding
unique_peak2-37477-4-10--1.48289213249054-1.5150158574804	chr5	3595617	3596092	+	0	NA	promoter-TSS (NM_001293806)	promoter-TSS (NM_001293806)	-212	NM_027777	71382	Mm.379196	NM_027777	ENSMUSG00000005907	Pex1	5430414H02Rik|E330005K07Rik|ZWS1	peroxisomal biogenesis factor 1	protein-coding
unique_peak1-4511-17-2-2.63333383748388-3.75443312462699	chr3	24783211	24784124	+	0	NA	Intergenic	RLTR41|LTR|ERV1	1268562	NM_001163387	192167	Mm.316080	NM_138666	ENSMUSG00000063887	Nlgn1	6330415N05Rik|BB179718|NL1|Nlg1|mKIAA1070	neuroligin 1	protein-coding
common_peak2-20999-25-44--0.630003190984569-0.975110594803311	chr11	23632842	23633801	+	0	NA	TTS (NM_028304)	TTS (NM_028304)	37649	NM_009044	19696	Mm.4869	NM_009044	ENSMUSG00000020275	Rel	c-Rel	reticuloendotheliosis oncogene	protein-coding
common_peak1-10518-31-26-0.470351168649655-0.720235944639222	chr14	7953187	7954375	+	0	NA	intron (NM_001270812, intron 2 of 5).3	intron (NM_001270812, intron 2 of 5).3	-15810	NM_001024712	100042149	Mm.396155	NM_001024712	ENSMUSG00000092167	Gm3696	544988|ENSMUSG00000056940|Gm10014	predicted gene 3696	protein-coding
common_peak2-23706-9-9--0.132314688483142-1.03275496310833	chr15	89109907	89110432	+	0	NA	exon (NM_026813, exon 17 of 25)	exon (NM_026813, exon 17 of 25)	25994	NR_105924	102465981		NR_105924		Mir6959	mmu-mir-6959	microRNA mir-6959	ncRNA
unique_peak1-814-8-2-1.42025991722641-1.65811743852845	chr11	4309352	4309881	+	0	NA	intron (NM_029458, intron 8 of 10)	intron (NM_029458, intron 8 of 10)	31469	NM_029458	75828	Mm.159592	NM_029458	ENSMUSG00000020419	Hormad2	4930529M09Rik	HORMA domain containing 2	protein-coding
common_peak2-31455-18-26--0.441968350935117-0.471456499375593	chr8	105297556	105298432	+	0	NA	intron (NM_009866, intron 1 of 12)	L3|LINE|CR1	11017	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
unique_peak2-32871-23-51--0.978672213632011-2.09593985174545	chr10	7210790	7212713	+	0	NA	Intergenic	ORR1A0-int|LTR|MaLR	-1597	NR_045946	619314	Mm.145928	NR_045946		B020014A21Rik	-	RIKEN cDNA B020014A21 gene	ncRNA
common_peak1-18388-7-6--0.00826409175941478-0.97990265578305	chr8	71312343	71312851	+	0	NA	Intergenic	ID_B1|SINE|B4	-5231	NM_001293791	70885	Mm.252421	NM_027590	ENSMUSG00000031864	Ints10	4921521J11Rik|AI462004	integrator complex subunit 10	protein-coding
unique_peak1-701-6-3-0.565398110380302-1.08602067057793	chr10	81075815	81076282	+	0	NA	Intergenic	Intergenic	6995	NR_030677	268319	Mm.131825	NM_001033363	ENSMUSG00000074862	BC025920	-	zinc finger protein pseudogene	pseudo
common_peak2-28814-10-29--1.55047525059975-2.39922209159552	chr5	65435996	65436825	+	0	NA	Intergenic	Intergenic	74853	NR_030577	100124451		NR_030577	miRBase:MI0005518	Mir574	Mirn574|mmu-mir-574	microRNA 574	ncRNA
common_peak1-18031-15-19--0.309763344331706-0.356936432242222	chr7	143052876	143053504	+	0	NA	Intergenic	Intergenic	-145128	NM_001081117	17345	Mm.4078	NM_001081117	ENSMUSG00000031004	Mki67	D630048A14Rik|Ki-67|Ki67	antigen identified by monoclonal antibody Ki 67	protein-coding
unique_peak2-37205-3-11--1.99894559068043-1.95434855131066	chr4	65604538	65605011	+	0	NA	intron (NM_207109, intron 7 of 22)	intron (NM_207109, intron 7 of 22)	338754	NM_001161782	69807	Mm.22786	NM_053084	ENSMUSG00000051675	Trim32	1810045E12Rik|3f3|BBS11|Zfp117	tripartite motif-containing 32	protein-coding
common_peak2-19821-31-70--0.924508448691559-2.54750191086934	chr1	88700980	88702939	+	0	NA	intron (NM_001172157, intron 6 of 21)	L1M2|LINE|L1	101580	NM_001172157	208718	Mm.389152	NM_153530	ENSMUSG00000053333	Dis3l2	4930429A22Rik|8030493P09Rik	DIS3 mitotic control homolog (S. cerevisiae)-like 2	protein-coding
unique_peak1-5340-10-1-2.35641534500877-2.57096726280955	chr5	90763948	90764470	+	0	NA	intron (NM_030886, intron 2 of 34)	intron (NM_030886, intron 2 of 34)	31002	NM_030886	81702	Mm.245522	NM_030886	ENSMUSG00000055204	Ankrd17	4933425K22Rik|A130069E23Rik|A930008M01|AA407558|AA516750|AU040470|Foe|Gtar|Mask|mKIAA0697	ankyrin repeat domain 17	protein-coding
common_peak2-28373-27-24-0.347689761120511-0.550049347815233	chr4	137664191	137665370	+	0	NA	intron (NM_001256198, intron 10 of 32)	intron (NM_001256198, intron 10 of 32)	-54344	NR_105825	102466907		NR_105825		Mir6399	mmu-mir-6399	microRNA mir-6399	ncRNA
common_peak1-13319-49-28-1.14830282789761-3.44325269351006	chr19	42518465	42519554	+	0	NA	Intergenic	Intergenic	-12736	NM_145123	72832	Mm.313558	NM_145123	ENSMUSG00000042401	Crtac1	2810454P21Rik|AW047536|Crtac1B|Lotus	cartilage acidic protein 1	protein-coding
unique_peak2-37421-3-20--2.80630051273804-3.35694334496952	chr4	149436662	149437292	+	0	NA	Intergenic	Intergenic	-5586	NR_029751	723848		NR_029751	miRBase:MI0000584	Mir34a	Mirn34a|mmu-mir-34a	microRNA 34a	ncRNA
common_peak2-30018-14-20--0.493101262421116-0.456667090758524	chr6	125166073	125166789	+	0	NA	intron (NM_009496, intron 1 of 4)	intron (NM_009496, intron 1 of 4)	832	NM_001080557	22317	Mm.32321	NM_009496	ENSMUSG00000030337	Vamp1	Syb-1|Syb1|VAMP-1|lew	vesicle-associated membrane protein 1	protein-coding
common_peak2-24541-8-8--0.164702583494742-1.00793137938329	chr17	27797629	27798112	+	0	NA	intron (NM_001286744, intron 1 of 9)	intron (NM_001286744, intron 1 of 9)	5334	NM_001286743	23969	Mm.4926	NM_011861	ENSMUSG00000040276	Pacsin1	A830061D09Rik|H74|mKIAA1379|syndapin	protein kinase C and casein kinase substrate in neurons 1	protein-coding
common_peak1-15318-8-13--0.802132504110034-0.562038191119711	chr4	45529431	45529874	+	0	NA	intron (NM_001033306, intron 1 of 5)	intron (NM_001033306, intron 1 of 5)	14048	NM_001033306	230126	Mm.251716	NM_001033306	ENSMUSG00000044813	Shb	BC028832	src homology 2 domain-containing transforming protein B	protein-coding
unique_peak2-36837-1-8--2.79698201165906-2.05605744720049	chr3	88627566	88628007	+	0	NA	non-coding (NR_015498, exon 2 of 2)	non-coding (NR_015498, exon 2 of 2)	8623	NR_015498	319830	Mm.400394	NR_015498		1500004A13Rik	5430404N14Rik|BB132176	RIKEN cDNA 1500004A13 gene	ncRNA
common_peak2-26107-13-14--0.12841856497075-0.301029995663977	chr2	4476405	4477149	+	0	NA	intron (NM_172475, intron 11 of 22)	intron (NM_172475, intron 11 of 22)	-4023	NM_001177844	209630	Mm.37932	NM_172475	ENSMUSG00000026657	Frmd4a	2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|OTTMUSG00000010806|mKIAA1294	FERM domain containing 4A	protein-coding
unique_peak1-3578-23-1-3.72176750450908-6.57132529354008	chr19	29185606	29186639	+	0	NA	intron (NM_021525, intron 1 of 8)	intron (NM_021525, intron 1 of 8)	10257	NM_021525	59028	Mm.28630	NM_021525	ENSMUSG00000024785	Rcl1	2310040A02Rik|AI789745|C76567|RPCL1|Rnac	RNA terminal phosphate cyclase-like 1	protein-coding
common_peak2-31368-21-34--0.559793751678731-0.677299098039755	chr8	84980203	84981623	+	0	NA	Intergenic	Intergenic	-54428	NM_008357	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak1-12079-44-30-0.86769652418166-2.15096905553244	chr17	24478564	24479713	+	0	NA	intron (NM_001031621, intron 2 of 29)	Lx7|LINE|L1	5059	NM_001031621	381072	Mm.328842	NM_001031621	ENSMUSG00000035435	Abca17	-	ATP-binding cassette, sub-family A (ABC1), member 17	protein-coding
unique_peak2-39752-1026-615-2.02894146902748-268.776372747449	chrUn_JH584304	54605	61450	+	0	NA	NA	NA	NA	NA								
unique_peak1-3533-38-13-1.76409773724093-4.93958276952711	chr19	21103011	21104539	+	0	NA	Intergenic	(TCTG)n|Simple_repeat|Simple_repeat	-75083	NM_028953	13409	Mm.219585	NM_028953	ENSMUSG00000024749	Tmc1	4933416G09Rik|Beethoven|Bth|CWEA1|dn	transmembrane channel-like gene family 1	protein-coding
common_peak1-8138-37-70--0.623754048018863-1.38710580071366	chr1	190928142	190929374	+	0	NA	Intergenic	Intergenic	-97039	NM_172650	226823	Mm.209880	NM_172650	ENSMUSG00000026608	Kctd3	4930438A20Rik|9330185B06|E330032J19Rik|NY-REN-45	potassium channel tetramerisation domain containing 3	protein-coding
unique_peak2-34313-6-10--0.894033508256995-1.21398586181642	chr13	94257302	94257795	+	0	NA	intron (NM_021310, intron 1 of 10)	B1_Mus1|SINE|Alu	12215	NM_021310	57748	Mm.100273	NM_021310	ENSMUSG00000021690	Jmy	-	junction-mediating and regulatory protein	protein-coding
common_peak1-13628-19-11-0.81772482594053-0.991115276827166	chr2	25271807	25272448	+	0	NA	Intergenic	Intergenic	-6635	NM_001289453	14347	Mm.1203	NM_013524	ENSMUSG00000036587	Fut7	AI853193|FTVII|Fuc-TVII|FucT-VII	fucosyltransferase 7	protein-coding
common_peak1-8263-66-46-0.963894812748204-3.69519584706626	chr10	22306148	22308355	+	0	NA	Intergenic	Intergenic	-57566	NM_178934	353169	Mm.473705	NM_178934	ENSMUSG00000037490	Slc2a12	GLUT-12|Glut12	solute carrier family 2 (facilitated glucose transporter), member 12	protein-coding
unique_peak1-808-14-4-1.57728806547028-2.4322161449009	chr11	3906593	3907308	+	0	NA	Intergenic	Intergenic	17014	NM_001177691	53897	Mm.103414	NM_016922	ENSMUSG00000049721	Gal3st1	Cst|Gcst	galactose-3-O-sulfotransferase 1	protein-coding
common_peak1-16633-28-22-0.529397163764449-0.781990829058356	chr6	39419502	39420603	+	0	NA	intron (NM_172477, intron 14 of 18)	intron (NM_172477, intron 14 of 18)	-49684	NM_018810	54484	Mm.270484	NM_018810	ENSMUSG00000029922	Mkrn1	RFP	makorin, ring finger protein, 1	protein-coding
common_peak2-21006-43-35-0.612638184081391-1.27423323032613	chr11	26592901	26594241	+	0	NA	Intergenic	Lx6|LINE|L1	-91537	NR_002890	654472	Mm.347777	NR_002890	ENSMUSG00000069939	Gm12070	OTTMUSG00000005300	glyceraldehyde-3-phosphate dehydrogenase pseudogene	pseudo
unique_peak2-34461-6-12--1.13504160776079-1.45089835786865	chr14	30625674	30626244	+	0	NA	Intergenic	Intergenic	-90909	NM_009785	12294	Mm.386754	NM_009785	ENSMUSG00000021991	Cacna2d3	Cacnad3	calcium channel, voltage-dependent, alpha2/delta subunit 3	protein-coding
common_peak2-23318-20-9-1.16614668970383-1.52222891542741	chr15	36848098	36848614	+	0	NA	Intergenic	Intergenic	88801	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
common_peak1-13691-19-35--0.767237674780626-1.06916698217164	chr2	30066388	30067328	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-5639	NM_172404	70266	Mm.216089	NM_172404	ENSMUSG00000039648	Ccbl1	2010009K05Rik|AI182306|Gtk|Kat1|KatI	cysteine conjugate-beta lyase 1	protein-coding
unique_peak2-34553-4-6--0.830815435910851-0.989110657569874	chr14	62884967	62885399	+	0	NA	Intergenic	L1Md_T|LINE|L1	26633	NM_173419	239133	Mm.127330	NM_173419	ENSMUSG00000048281	Dleu7	BC038059	deleted in lymphocytic leukemia, 7	protein-coding
common_peak1-19427-8-8--0.164702583494742-1.00793137938329	chrX	75735299	75735755	+	0	NA	intron (NM_027322, intron 2 of 3)	intron (NM_027322, intron 2 of 3)	93617	NM_001164275	546336	Mm.211712	NM_027322	ENSMUSG00000047996	Prrg1	2010007L08Rik	proline rich Gla (G-carboxyglutamic acid) 1	protein-coding
common_peak2-23484-17-30--0.735899972181837-0.841847921495509	chr15	74967511	74968481	+	0	NA	Intergenic	Intergenic	-25617	NM_001099217	100041546	Mm.482110	NM_001099217	ENSMUSG00000022584	Ly6c2	Ly-6C.2|Ly-6C2	lymphocyte antigen 6 complex, locus C2	protein-coding
common_peak1-12809-17-32--0.826097781153416-1.02859851787301	chr18	67205292	67205919	+	0	NA	Intergenic	(A)n|Simple_repeat|Simple_repeat	-42347	NM_177137	14680	Mm.440746	NM_010307	ENSMUSG00000024524	Gnal	2610011C15Rik|9630020G10Rik|Galphaolf|Gna10|Golf	guanine nucleotide binding protein, alpha stimulating, olfactory type	protein-coding
common_peak2-25384-26-15-0.927899092158462-1.40782320807777	chr18	85306489	85307312	+	0	NA	Intergenic	ID4|SINE|ID	-185984	NM_025969	67105	Mm.250617	NM_025969	ENSMUSG00000024645	Timm21	1700034H14Rik|2700002I20Rik	tranlocase of inner mitochondrial membrane 21	protein-coding
common_peak1-12278-7-7--0.200909169701811-0.97990265578305	chr17	44543379	44543794	+	0	NA	Intergenic	Intergenic	218065	NM_172621	224796	Mm.37666	NM_172621	ENSMUSG00000023959	Clic5	5730531E12Rik|B330005L24|Gm322|jbg	chloride intracellular channel 5	protein-coding
common_peak1-15848-8-15--0.994777582052429-0.771068449301683	chr5	3321019	3321501	+	0	NA	Intergenic	MTEb|LTR|MaLR	-23052	NM_009873	12571	Mm.31672	NM_009873	ENSMUSG00000040274	Cdk6	5830411I20|AI504062|Crk2	cyclin-dependent kinase 6	protein-coding
unique_peak1-5527-15-7-1.01216475055566-1.08658567012551	chr5	139373813	139374392	+	0	NA	Intergenic	Intergenic	78068	NM_001195128	384244	Mm.485002	NM_001195128	ENSMUSG00000094504	Gm5294	EG384244	predicted gene 5294	protein-coding
unique_peak2-34761-5-5--0.289342836727009-0.909929411522249	chr15	58134037	58134492	+	0	NA	Intergenic	Intergenic	21460	NM_177755	268807	Mm.124498	NM_177755	ENSMUSG00000022357	Klhl38	8230402K04Rik	kelch-like 38	protein-coding
common_peak2-22028-21-32--0.474904854092218-0.550049347815239	chr12	64917829	64918557	+	0	NA	Intergenic	Lx7|LINE|L1	657692	NM_001163271	623046	Mm.189552	NM_001163271	ENSMUSG00000043060	Fscb	EG623046	fibrous sheath CABYR binding protein	protein-coding
unique_peak1-5289-16-3-2.11826364226806-2.65002542325363	chr5	66497722	66498502	+	0	NA	intron (NM_001127382, intron 2 of 7)	(TG)n|Simple_repeat|Simple_repeat	-8694	NM_139065	245945	Mm.36863	NM_139065	ENSMUSG00000070780	Rbm47	9530077J19Rik	RNA binding motif protein 47	protein-coding
common_peak2-29821-9-10--0.269818212233077-1.05503135781948	chr6	91684046	91684524	+	0	NA	intron (NM_009320, intron 5 of 14)	intron (NM_009320, intron 5 of 14)	50224	NM_009320	21366	Mm.395650	NM_009320	ENSMUSG00000030096	Slc6a6	AA589629|C80501|Taut	solute carrier family 6 (neurotransmitter transporter, taurine), member 6	protein-coding
unique_peak1-437-13-5-1.19350952991661-1.95509489018123	chr1	164798350	164799067	+	0	NA	Intergenic	RLTR13D2|LTR|ERVK	-2029	NM_010231	14261	Mm.976	NM_010231	ENSMUSG00000040181	Fmo1	-	flavin containing monooxygenase 1	protein-coding
unique_peak1-2460-6-0-2.5653981103803-2.10720996964787	chr15	103274477	103274969	+	0	NA	exon (NM_177631, exon 4 of 7)	exon (NM_177631, exon 4 of 7)	4167	NM_177631	223927	Mm.243718	NM_177631	ENSMUSG00000053508	BC048502	-	cDNA sequence BC048502	protein-coding
common_peak2-23184-11-6-0.701338662194009-1.32595962126035	chr15	62209839	62210254	+	0	NA	Intergenic	Intergenic	-159040	NR_003523	67552	Mm.484027	NM_026230		H2afy3	4933432H23Rik	H2A histone family, member Y3	pseudo
common_peak2-26884-8-6-0.197867495889966-1.03789460276074	chr2	157170605	157171005	+	0	NA	intron (NM_010285, intron 1 of 4)	intron (NM_010285, intron 1 of 4)	1586	NM_010285	14601	Mm.389327	NM_010285	ENSMUSG00000027643	Ghrh	Ghrf	growth hormone releasing hormone	protein-coding
common_peak2-25925-7-7--0.200909169701811-0.97990265578305	chr19	46489211	46489761	+	0	NA	intron (NM_001025391, intron 2 of 11)	intron (NM_001025391, intron 2 of 11)	18100	NM_015752	24069	Mm.41210	NM_015752	ENSMUSG00000025231	Sufu	Su(fu)	suppressor of fused homolog (Drosophila)	protein-coding
common_peak1-8803-10-9-0.0344872501214071-1.05503135781948	chr11	20532975	20533527	+	0	NA	intron (NM_001038625, intron 1 of 1)	intron (NM_001038625, intron 1 of 1)	1271	NM_001038625	58172	Mm.339676	NM_021372	ENSMUSG00000049800	Sertad2	AB041541|AU021878|Kiaa0127|SEI-2|Sei2|TRIP-Br2|mKIAA0127	SERTA domain containing 2	protein-coding
unique_peak2-33385-7-9--0.522837264589173-1.05908390183068	chr11	49087766	49088283	+	0	NA	Intergenic	Intergenic	-5628	NM_146471	258463	Mm.377517	NM_146471	ENSMUSG00000059864	Olfr1393	MOR256-24	olfactory receptor 1393	protein-coding
common_peak2-32229-18-12-0.612479433087259-0.739965416525508	chr9	123213099	123213694	+	0	NA	Intergenic	Intergenic	-43489	NM_001002267	72309	Mm.8569	NM_001002267	ENSMUSG00000054871	Tmem158	2310037P21Rik|Ris1	transmembrane protein 158	protein-coding
unique_peak2-35229-3-12--2.11442280810037-2.15846853396659	chr16	92582092	92582675	+	0	NA	Intergenic	MER67A|LTR|ERV1	83991	NM_172469	209195	Mm.44747	NM_172469	ENSMUSG00000022949	Clic6	5730466J16Rik|AL022908|AW045520|CLIC1L	chloride intracellular channel 6	protein-coding
common_peak2-31392-13-7-0.778472030637769-0.817533494790411	chr8	87071368	87071875	+	0	NA	intron (NM_007578, intron 11 of 46)	B1_Mur2|SINE|Alu	115130	NM_010499	15936	Mm.399	NM_010499	ENSMUSG00000053560	Ier2	AI317238|Ch1|Pip92	immediate early response 2	protein-coding
unique_peak2-39097-2-5--1.50241675698448-1.08602067057793	chr8	77468980	77469405	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-48410	NM_178017	70823	Mm.261739	NM_178017	ENSMUSG00000034518	Hmgxb4	4733401K04Rik|AI316803|E430025G12|Hmgb2l1	HMG box domain containing 4	protein-coding
unique_peak1-3320-6-2-0.980435609659146-1.26211192963361	chr18	81058457	81058863	+	0	NA	intron (NM_001201569, intron 7 of 29)	intron (NM_001201569, intron 7 of 29)	72137	NM_001201569	50771	Mm.247138	NM_015805	ENSMUSG00000024566	Atp9b	AA934181|Atpc2b|IIb|MMR	ATPase, class II, type 9B	protein-coding
common_peak1-14366-34-47--0.20289397371989-0.362058538051628	chr2	167492347	167493312	+	0	NA	Intergenic	MTD-int|LTR|MaLR	-5785	NM_145538	407243	Mm.4863	NM_145538		Tmem189	AI840826|Kua	transmembrane protein 189	protein-coding
unique_peak1-4523-8-2-1.42025991722641-1.65811743852845	chr3	30218009	30218418	+	0	NA	intron (NM_021442, intron 1 of 2)	B3A|SINE|B2	190196	NM_021442	14013	Mm.56965	NM_007963	ENSMUSG00000027684	Mecom	D630039M04Rik|Evi-1|Evi1|Jbo|Mds|Mds1|Mds1-Evi1|Prdm3|Znfpr1b1	MDS1 and EVI1 complex locus	protein-coding
common_peak1-8071-13-1-2.77847203063777-3.64038867156802	chr1	177718150	177718779	+	0	NA	intron (NM_029453, intron 16 of 27)	RMER17D2|LTR|ERVK	89740	NM_029453	75820	Mm.50361	NM_029453	ENSMUSG00000026523	Wdr64	4930415O10Rik|4930511H01Rik	WD repeat domain 64	protein-coding
common_peak1-9990-39-18-1.36783373347557-3.53754093745204	chr13	49299095	49300544	+	0	NA	intron (NM_026738, intron 3 of 5)	intron (NM_026738, intron 3 of 5)	11576	NM_026738	68480	Mm.3336	NM_026738	ENSMUSG00000037960	1110007C09Rik	AI851695|Bincard	RIKEN cDNA 1110007C09 gene	protein-coding
common_peak2-22143-11-9-0.186765489364251-0.344532117358383	chr12	86000866	86001260	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	17217	NM_001033776	432677	Mm.311913	NM_001033776	ENSMUSG00000071235	Vrtn	7420416P09Rik	vertebrae development associated	protein-coding
common_peak1-8333-53-99--0.502883177358796-1.30703964844599	chr10	44003166	44004788	+	0	NA	intron (NM_053069, intron 1 of 7)	intron (NM_053069, intron 1 of 7)	15813	NM_053069	11793	Mm.22264	NM_053069	ENSMUSG00000038160	Atg5	2010107M05Rik|3110067M24Rik|AW319544|Apg5l|Atg5l|C88337|Paddy	autophagy related 5	protein-coding
common_peak1-17669-27-28-0.133564955767664-0.358978896303361	chr7	65467805	65469012	+	0	NA	Intergenic	Intergenic	-445164	NM_009728	11982	Mm.135129	NM_009728	ENSMUSG00000025324	Atp10a	Atp10c|pfatp	ATPase, class V, type 10A	protein-coding
common_peak1-16129-33-49--0.312518627249196-0.498996592876743	chr5	69556665	69557681	+	0	NA	intron (NM_175519, intron 1 of 1)	Lx3_Mus|LINE|L1	175775	NM_175519	243043	Mm.234821	NM_175519	ENSMUSG00000037653	Kctd8	A730087N02Rik	potassium channel tetramerisation domain containing 8	protein-coding
common_peak2-30778-37-39-0.204064976598456-0.426350872773373	chr7	126502511	126503633	+	0	NA	Intergenic	MLT1A1|LTR|MaLR	99714	NM_025989	67133	Mm.46403	NM_025989	ENSMUSG00000030954	Gp2	2310037I18Rik|AV060639	glycoprotein 2 (zymogen granule membrane)	protein-coding
common_peak1-11180-32-51--0.421347698921432-0.649502410911277	chr15	76655857	76657208	+	0	NA	Intergenic	Lx7|LINE|L1	-7932	NM_198420	223666	Mm.322931	NM_198420	ENSMUSG00000033697	Arhgap39	9530053N22|AI843066|D15Wsu169e|Kiaa1688|Porf-2	Rho GTPase activating protein 39	protein-coding
unique_peak1-1629-7-1-1.79909083029819-1.80617997398389	chr13	45401939	45402411	+	0	NA	Intergenic	Intergenic	-82936	NM_153789	218203	Mm.212855	NM_153789	ENSMUSG00000038175	Mylip	9430057C20Rik|Mir	myosin regulatory light chain interacting protein	protein-coding
unique_peak1-2237-9-5-0.604650905683064-1.21398586181642	chr15	76275327	76275774	+	0	NA	intron (NM_175457, intron 33 of 43)	intron (NM_175457, intron 33 of 43)	11906	NR_105919	102465576		NR_105919		Mir6954	mmu-mir-6954	microRNA mir-6954	ncRNA
unique_peak2-38685-5-8--0.874305337448166-1.10484139239135	chr7	101108396	101108883	+	0	NA	Intergenic	Intergenic	880250	NM_021427	58238	Mm.113787	NM_021427		Fam181b	A830059I20Rik|AB041569	family with sequence similarity 181, member B	protein-coding
common_peak2-24223-19-30--0.551508983725189-0.647723624534446	chr16	85132367	85133569	+	0	NA	intron (NM_001198823, intron 1 of 17)	intron (NM_001198823, intron 1 of 17)	40984	NM_001198825	11820	Mm.277585	NM_007471	ENSMUSG00000022892	App	Abeta|Abpp|Adap|Ag|Cvap|E030013M08Rik|betaApp	amyloid beta (A4) precursor protein	protein-coding
common_peak2-24121-22-31--0.352715894912595-0.440892966163086	chr16	33594275	33595488	+	0	NA	intron (NM_134251, intron 5 of 12)	intron (NM_134251, intron 5 of 12)	76200	NM_001083902	171286	Mm.35253	NM_134251	ENSMUSG00000035506	Slc12a8	CCC9|E330020C02Rik	solute carrier family 12 (potassium/chloride transporters), member 8	protein-coding
unique_peak2-38337-1-8--2.79698201165906-2.05605744720049	chr7	25788089	25788586	+	0	NA	intron (NM_001290469, intron 1 of 22)	intron (NM_001290469, intron 1 of 22)	2619	NM_001290469	232975	Mm.44101	NM_144921	ENSMUSG00000040907	Atp1a3	Atpa-2	ATPase, Na+/K+ transporting, alpha 3 polypeptide	protein-coding
common_peak2-28305-19-39--0.919240768225676-1.49187957593	chr4	132922054	132922655	+	0	NA	Intergenic	Intergenic	-3333	NM_016981	20544	Mm.4312	NM_016981	ENSMUSG00000028854	Slc9a1	AW554487|Apnh|Nhe1|swe	solute carrier family 9 (sodium/hydrogen exchanger), member 1	protein-coding
unique_peak2-34655-7-5-0.214128329577033-1.01466476204226	chr14	120832826	120833198	+	0	NA	Intergenic	Intergenic	-44671	NM_029519	76108	Mm.261448	NM_029519	ENSMUSG00000051615	Rap2a	5830461H18Rik	RAS related protein 2a	protein-coding
unique_peak1-5636-31-4-2.90331057592576-6.95082544816871	chr6	17315798	17316954	+	0	NA	Intergenic	Intergenic	58736	NM_001243064	12389	Mm.28278	NM_007616	ENSMUSG00000007655	Cav1	Cav|Cav-1	caveolin 1, caveolae protein	protein-coding
common_peak2-27056-39-49--0.0280949428555708-0.301029995663988	chr2	181187237	181188193	+	0	NA	intron (NM_028125, intron 1 of 2)	RMER6A|LTR|ERVK	6416	NM_028125	72147	Mm.486504	NM_027656	ENSMUSG00000027583	Zbtb46	2610019F01Rik|4933406L05Rik|BZEL|Btbd4	zinc finger and BTB domain containing 46	protein-coding
unique_peak1-1508-8-0-3.00522241794757-2.70926996097583	chr13	3765596	3766130	+	0	NA	Intergenic	Intergenic	37701	NM_027416	70405	Mm.20079	NM_027416	ENSMUSG00000063130	Calml3	2310068O22Rik|AI326174	calmodulin-like 3	protein-coding
unique_peak2-38286-7-11--0.785871670422967-1.21681515183528	chr6	134668646	134669271	+	0	NA	exon (NM_130447, exon 7 of 7)	exon (NM_130447, exon 7 of 7)	73688	NM_130447	70686	Mm.491182	NM_130447	ENSMUSG00000030203	Dusp16	3830417M17Rik|AW558566|D6Ertd213e|MKP-7|MKP7|Mkpm	dual specificity phosphatase 16	protein-coding
unique_peak1-5912-26-10-1.46846747352116-2.57346781069461	chr6	88903455	88904757	+	0	NA	Intergenic	L1M4b|LINE|L1	51861	NM_011906	24100	Mm.284480	NM_011906	ENSMUSG00000002871	Tpra1	40kDa|Gpr175|Tpra40	transmembrane protein, adipocyte asscociated 1	protein-coding
common_peak2-27009-12-8-0.478850983645327-0.562038191119709	chr2	173256114	173256596	+	0	NA	Intergenic	RMER15|LTR|ERVL	-91738	NM_028158	72221	Mm.46132	NM_028158	ENSMUSG00000027518	1700021F07Rik	-	RIKEN cDNA 1700021F07 gene	protein-coding
common_peak2-22194-21-33--0.517973575984104-0.610902792227722	chr12	110485542	110486337	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-179512	NM_001163175	380785	Mm.342085	NM_001163175	ENSMUSG00000040867	Begain	BM948371|Gm897	brain-enriched guanylate kinase-associated	protein-coding
common_peak1-13309-22-25--0.0531556130536872-0.301029995663976	chr19	41801403	41802151	+	0	NA	intron (NM_015748, intron 2 of 36)	intron (NM_015748, intron 2 of 36)	16569	NM_015748	20562	Mm.40322	NM_015748	ENSMUSG00000025020	Slit1	Slil1|mKIAA0813	slit homolog 1 (Drosophila)	protein-coding
common_peak1-12814-28-35--0.11696588162085-0.313805205020546	chr18	67609924	67610941	+	0	NA	Intergenic	Lx7|LINE|L1	-1642	NM_027130	69597	Mm.426052	NM_027130	ENSMUSG00000024527	Afg3l2	2310036I02Rik|AW260507|Emv66|par	AFG3-like AAA ATPase 2	protein-coding
unique_peak2-34330-5-11--1.28934283672701-1.477227296591	chr13	98095007	98095666	+	0	NA	Intergenic	Intergenic	84276	NM_007930	13803	Mm.241073	NM_007930	ENSMUSG00000041773	Enc1	Nrpb|PIG10	ectodermal-neural cortex 1	protein-coding
unique_peak1-2959-10-5-0.771452844287613-1.33892459842472	chr17	71264461	71265081	+	0	NA	Intergenic	MLT1A1|LTR|MaLR	-61899	NM_001164074	21815	Mm.101034	NM_009372	ENSMUSG00000047407	Tgif1	AA959811|AI462167|Tgif	TGFB-induced factor homeobox 1	protein-coding
common_peak2-22639-62-69-0.281468441857118-0.662654265687252	chr13	91807226	91808090	+	0	NA	intron (NM_024186, intron 5 of 15)	intron (NM_024186, intron 5 of 15)	-73468	NM_028790	74156	Mm.275963	NM_028790	ENSMUSG00000021620	Acot12	1300004O04Rik|4930449F15Rik|AV027244|Cach|mCACH-1	acyl-CoA thioesterase 12	protein-coding
unique_peak2-36753-2-6--1.72480917832092-1.26211192963361	chr3	60560959	60561308	+	0	NA	Intergenic	Intergenic	-245574	NM_008772	18441	Mm.281452	NM_008772	ENSMUSG00000027765	P2ry1	P2Y1	purinergic receptor P2Y, G-protein coupled 1	protein-coding
common_peak2-19984-40-26-0.90408818058763-2.09593985174544	chr1	133696161	133697274	+	0	NA	intron (NM_178079, intron 2 of 12)	MTC|LTR|MaLR	2745	NM_178079	212933	Mm.23844	NM_178079	ENSMUSG00000042251	Pm20d1	4732466D17Rik|AI098026	peptidase M20 domain containing 1	protein-coding
unique_peak1-3456-14-1-2.89921616035764-3.91338994363176	chr19	9044424	9045013	+	0	NA	intron (NM_026007, intron 5 of 9)	B1F|SINE|Alu	3187	NM_026007	67160	Mm.247762	NM_026007	ENSMUSG00000071644	Eef1g	2610301D06Rik|AA407312|EF1G	eukaryotic translation elongation factor 1 gamma	protein-coding
unique_peak2-38621-4-7--1.02346051385325-1.09384600808989	chr7	80774511	80774896	+	0	NA	Intergenic	Intergenic	56746	NR_033604	244061	Mm.484605	NR_033604		Gm4971	EG244061	Smad nuclear interacting protein 1 pseudogene	pseudo
unique_peak2-34930-8-16--1.08224042330277-0.891319708951328	chr15	85981840	85982784	+	0	NA	intron (NM_145475, intron 6 of 12)	B1_Mur4|SINE|Alu	34259	NM_145475	223753	Mm.222685	NM_145475	ENSMUSG00000035891	Cerk	AI848610|D330016D08Rik|mKIAA1646	ceramide kinase	protein-coding
common_peak2-31416-19-7-1.40268732666169-1.89173646618542	chr8	94354356	94354845	+	0	NA	Intergenic	Intergenic	-29047	NM_008393	16373	Mm.238044	NM_008393	ENSMUSG00000031734	Irx3	AI894186	Iroquois related homeobox 3	protein-coding
common_peak1-14120-21-42--0.856775489435862-1.3806499615138	chr2	128818151	128818988	+	0	NA	intron (NM_178404, intron 2 of 11)	intron (NM_178404, intron 2 of 11)	25431	NM_178404	78751	Mm.26377	NM_178404	ENSMUSG00000042851	Zc3h6	4631426G04Rik|4833425H18Rik|AU024389|AW060453|Zc3hdc6|mKIAA2035	zinc finger CCCH type containing 6	protein-coding
unique_peak2-34253-4-5--0.608423014574403-0.909929411522249	chr13	60110331	60110726	+	0	NA	Intergenic	Intergenic	-20544	NR_046142	328263	Mm.123405	NR_046142		A530065N20Rik	A530065N20	RIKEN cDNA A530046M15 gene	ncRNA
common_peak1-14808-32-33-0.191629177969321-0.409729630423047	chr3	90265904	90266964	+	0	NA	intron (NM_008727, intron 4 of 21)	intron (NM_008727, intron 4 of 21)	3354	NM_008727	18160	Mm.4627	NM_008727	ENSMUSG00000027931	Npr1	AI893888|GC-A|NPR-A|NPRA|Pndr	natriuretic peptide receptor 1	protein-coding
unique_peak2-39798-5-6--0.511735258063458-0.947717972411649	chrX	19080453	19080819	+	0	NA	Intergenic	Intergenic	-356539	NR_029807	723828		NR_029807	miRBase:MI0000710	Mir222	Mirn222|mmu-mir-222	microRNA 222	ncRNA
unique_peak1-4209-11-0-3.50869358425161-3.61235994796777	chr2	119187847	119188108	+	0	NA	Intergenic	Intergenic	10999	NM_026929	69065	Mm.35083	NM_026929	ENSMUSG00000027313	Chac1	1810008K03Rik	ChaC, cation transport regulator 1	protein-coding
unique_peak1-7317-7-3-0.799090830298189-1.23214870625617	chr9	120602047	120602479	+	0	NA	Intergenic	MER5A|DNA|MER1_type	115815	NR_073359	76100	Mm.48212	NR_073359	ENSMUSG00000052658	5830454E08Rik	-	RIKEN cDNA 5830454E08 gene	ncRNA
common_peak2-30691-27-36--0.217907414733714-0.352152970649951	chr7	110164064	110165019	+	0	NA	Intergenic	Intergenic	-25454	NM_147053	259055	Mm.377812	NM_147053	ENSMUSG00000073961	Olfr582	MOR30-3	olfactory receptor 582	protein-coding
common_peak1-9291-8-10--0.454209200689727-1.078512453669	chr11	88582619	88583175	+	0	NA	intron (NR_038058, intron 2 of 3)	L2|LINE|L2	2940	NR_038058	193280	Mm.396842	NR_038058		C030037D09Rik	9330160M04	RIKEN cDNA C030037D09 gene	ncRNA
common_peak2-26885-39-53--0.139126255244315-0.335101043913478	chr2	157278845	157279907	+	0	NA	intron (NM_001025395, intron 2 of 13)	intron (NM_001025395, intron 2 of 13)	29347	NM_001025395	20779	Mm.22845	NM_009271	ENSMUSG00000027646	Src	AW259666|pp60c-src	Rous sarcoma oncogene	protein-coding
unique_peak2-38915-4-13--1.83081543591085-2.04196296489515	chr8	14651812	14652421	+	0	NA	intron (NM_172910, intron 4 of 15)	intron (NM_172910, intron 4 of 15)	-236420	NM_012000	26889	Mm.254027	NM_012000	ENSMUSG00000026317	Cln8	mnd	ceroid-lipofuscinosis, neuronal 8	protein-coding
common_peak2-21474-10-23--1.22854715571239-1.44380006500971	chr11	87736676	87737310	+	0	NA	Intergenic	RSINE1|SINE|B4	-8488	NM_146412	258407	Mm.271337	NM_146412	ENSMUSG00000060787	Olfr464	MOR240-2	olfactory receptor 464	protein-coding
unique_peak1-3714-7-0-2.79909083029819-2.40823996531185	chr19	44982010	44982423	+	0	NA	Intergenic	Intergenic	-23393	NM_001081225	226151	Mm.212609	NM_172638	ENSMUSG00000036097	Fam178a	3632432H19|6030443O07Rik|AU014917	family with sequence similarity 178, member A	protein-coding
unique_peak2-36937-4-7--1.02346051385325-1.09384600808989	chr3	103789958	103790393	+	0	NA	intron (NM_001163469, intron 6 of 17)	B1_Mur2|SINE|Alu	-17936	NR_030676	100125931	Mm.400392	NR_030676	ENSMUSG00000089998	Phtf1os	A130049A11Rik	putative homeodomain transcription factor 1, opposite strand	ncRNA
unique_peak2-37822-2-4--1.23938235115068-0.931118710592187	chr5	125475896	125476272	+	0	NA	Intergenic	(TCCA)n|Simple_repeat|Simple_repeat	-7761	NM_028443	73121	Mm.296138	NM_028443	ENSMUSG00000037962	Fam101a	3110032G18Rik|cfm|cfm2	family with sequence similarity 101, member A	protein-coding
common_peak2-30410-5-7--0.704380336005853-1.01466476204226	chr7	35646827	35647215	+	0	NA	Intergenic	B1F|SINE|Alu	-49291	NM_175140	68947	Mm.29380	NM_175140	ENSMUSG00000060402	Chst8	1500011J21Rik|AI426009	carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8	protein-coding
unique_peak2-38752-7-20--1.59322659248057-1.71830443967823	chr7	118128989	118129509	+	0	NA	Intergenic	Intergenic	-3274	NM_194464	17540	Mm.250023	NM_010826	ENSMUSG00000005611	Mrvi1	BB115629|Irag|Ris1	MRV integration site 1	protein-coding
unique_peak1-6570-11-3-1.50869358425161-1.95434855131066	chr7	134108729	134109312	+	0	NA	intron (NM_001252566, intron 12 of 16)	B2_Mm2|SINE|B2	-10408	NM_026638	52858	Mm.28219	NM_026638	ENSMUSG00000030682	Cdipt	9530042F15Rik|D7Bwg0575e|Pis|Pis1	CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)	protein-coding
common_peak2-20252-9-5-0.604650905683064-1.21398586181642	chr1	184344930	184345234	+	0	NA	intron (NM_173378, intron 1 of 17)	intron (NM_173378, intron 1 of 17)	5784	NM_173378	209456	Mm.287450	NM_173378	ENSMUSG00000026510	Trp53bp2	53BP2|AI746547|ASPP2|PPP1R13A|Tp53bp2|X98550	transformation related protein 53 binding protein 2	protein-coding
unique_peak1-469-8-2-1.42025991722641-1.65811743852845	chr1	172078255	172078812	+	0	NA	intron (NM_133806, intron 8 of 10)	intron (NM_133806, intron 8 of 10)	26544	NM_133806	107652	Mm.27969	NM_133806	ENSMUSG00000026670	Uap1	AA420407|AA437972|AGX-1|AGX-2|AGX1|AgX|ESTM38|SPAG2	UDP-N-acetylglucosamine pyrophosphorylase 1	protein-coding
unique_peak1-322-12-6-0.841421063030034-1.58711810488664	chr1	132152329	132152919	+	0	NA	Intergenic	L1Md_F2|LINE|L1	166952	NM_007827	13137	Mm.436759	NM_007827	ENSMUSG00000026401	Daf2	AI323748|Cd55b|Daf|Daf-TM|TM-DAF	decay accelerating factor 2	protein-coding
common_peak2-29015-26-29-0.0210084965499435-0.304710633611964	chr5	111330621	111331338	+	0	NA	intron (NM_001267622, intron 2 of 23)	L1VL4|LINE|L1	22157	NM_001267622	209683	Mm.295660	NM_024477	ENSMUSG00000033209	Ttc28	2310015L07Rik|6030435N04|AI428795|AI851761|BC002262|TPRBK	tetratricopeptide repeat domain 28	protein-coding
common_peak1-19145-63-103--0.262127127070502-0.593954113235467	chr9	86695173	86696398	+	0	NA	intron (NM_001277982, intron 14 of 29)	intron (NM_001277982, intron 14 of 29)	59351	NM_178738	244954	Mm.257629	NM_178738	ENSMUSG00000033491	Prss35	6030424L22Rik|P3D9	protease, serine 35	protein-coding
common_peak2-28427-15-8-0.842239749113344-0.891319708951327	chr4	148150599	148151120	+	0	NA	Intergenic	Intergenic	-27642	NM_001159344	69743	Mm.233879	NM_027195	ENSMUSG00000028977	Casz1	2410019P08Rik|AV096627|BC040081|Cst|D4Ertd432e	castor zinc finger 1	protein-coding
common_peak2-21238-17-20--0.174021084573723-0.306598483909156	chr11	68313423	68314208	+	0	NA	Intergenic	Intergenic	-2706	NM_001004435	104709	Mm.234573	NM_001004435	ENSMUSG00000046207	Pik3r6	BB220380|p84|p84 PIKAP|p87(PIKAP)|p87PIKAP	phosphoinositide-3-kinase, regulatory subunit 6	protein-coding
unique_peak2-36268-4-6--0.830815435910851-0.989110657569874	chr2	59697839	59698223	+	0	NA	intron (NM_001159636, intron 9 of 10)	PB1D10|SINE|Alu	22632	NM_001159636	72137	Mm.288734	NM_028118	ENSMUSG00000026988	Wdsub1	1700048E19Rik|2610014F08Rik	WD repeat, SAM and U-box domain containing 1	protein-coding
common_peak2-31000-77-95-0.199564078834841-0.539575460195755	chr8	8689566	8690817	+	0	NA	promoter-TSS (NR_106114)	promoter-TSS (NR_106114)	-29	NR_106114	102465762		NR_106114		Mir7654	mmu-mir-7654	microRNA mir-7654	ncRNA
common_peak1-15193-25-63--1.13815009465489-3.09530603560454	chr3	158031209	158032183	+	0	NA	intron (NM_001291453, intron 3 of 25)	intron (NM_001291453, intron 3 of 25)	193489	NM_001291453	242274	Mm.132162	NM_001081358	ENSMUSG00000028176	Lrrc7	AK122498|densin|mKIAA1365	leucine rich repeat containing 7	protein-coding
common_peak2-22642-8-4-0.683294323060208-1.21878474469819	chr13	92274872	92275282	+	0	NA	intron (NM_009027, intron 9 of 23)	intron (NM_009027, intron 9 of 23)	-258587	NM_198415	76722	Mm.316438	NM_198415	ENSMUSG00000021622	Ckmt2	2300008A19Rik|ScCKmit	creatine kinase, mitochondrial 2	protein-coding
common_peak1-13291-20-18-0.240147271147608-0.388034239052786	chr19	38084137	38084922	+	0	NA	intron (NM_001099634, intron 3 of 52)	(CATA)n|Simple_repeat|Simple_repeat	33538	NM_001099634	226101	Mm.34674	NM_177035	ENSMUSG00000048612	Myof	2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3	myoferlin	protein-coding
common_peak1-13478-188-231-0.475447137885404-3.63402000199099	chr2	14073034	14074988	+	0	NA	Intergenic	Intergenic	-22140	NM_001081310	625286	Mm.158781	NM_001081310	ENSMUSG00000061531	Tmem236	2010003H20Rik|Fam23a|Gm613	transmembrane protein 236	protein-coding
common_peak1-9545-16-23--0.466698858453094-0.497202060940027	chr11	116580891	116581576	+	0	NA	Intergenic	Intergenic	-25259	NM_009180	20446	Mm.3947	NM_009180		St6galnac2	II|ST6GalNAc|Siat7|Siat7b	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2	protein-coding
common_peak1-8600-10-8-0.186490343566457-1.078512453669	chr10	111544320	111544912	+	0	NA	3' UTR (NM_026223, exon 6 of 6)	3' UTR (NM_026223, exon 6 of 6)	24206	NM_026223	67537	Mm.292351	NM_026223	ENSMUSG00000020214	Glipr1l2	4921508O11Rik	GLI pathogenesis-related 1 like 2	protein-coding
unique_peak2-37539-7-13--1.00826409175941-0.697979855752659	chr5	29569120	29569854	+	0	NA	intron (NM_020295, intron 15 of 16)	L1_Mur3|LINE|L1	46954	NM_001289757	56874	Mm.87352	NM_021470	ENSMUSG00000029130	Rnf32	1700009J01Rik|2700025B22Rik|4930542N22Rik|Lmbr2	ring finger protein 32	protein-coding
unique_peak2-37287-7-15--1.20090916970181-0.947446088118041	chr4	118180228	118180820	+	0	NA	Intergenic	ORR1A1|LTR|MaLR	-18070	NM_011587	21846	Mm.4345	NM_011587	ENSMUSG00000033191	Tie1	D430008P04Rik|TIE|tie-1	tyrosine kinase with immunoglobulin-like and EGF-like domains 1	protein-coding
common_peak2-27799-40-80--0.680874320133526-1.70669763709067	chr3	139074211	139076105	+	0	NA	intron (NM_198659, intron 10 of 13)	intron (NM_198659, intron 10 of 13)	206301	NM_198659	381476	Mm.188334	NM_198659	ENSMUSG00000047940	Stpg2	B930007M17Rik|Gm1017	sperm tail PG rich repeat containing 2	protein-coding
common_peak1-18949-15-12-0.311725032414564-0.425539671739611	chr9	50603755	50604497	+	0	NA	intron (NR_045601, intron 7 of 13)	intron (NR_045601, intron 7 of 13)	20796	NR_045601	102580	Mm.160035	NM_133981	ENSMUSG00000032059	Alg9	8230402H15Rik|AI747665|B430313H07Rik|Dibd1	asparagine-linked glycosylation 9 (alpha 1,2 mannosyltransferase)	protein-coding
common_peak1-17279-22-15-0.647284105087405-0.849699271740893	chr6	135262699	135263734	+	0	NA	Intergenic	Intergenic	-2814	NM_029595	76400	Mm.293018	NM_029595		Pbp2	1700023A18Rik|AI326308|Pebp-2|Pebp2	phosphatidylethanolamine binding protein 2	protein-coding
unique_peak2-35340-12-8-0.478850983645327-0.562038191119709	chr17	24221027	24221505	+	0	NA	intron (NM_001286662, intron 11 of 13)	Charlie1|DNA|MER1_type	-10814	NM_027008	69259	Mm.28171	NM_027008	ENSMUSG00000016946	Kctd5	2610030N08Rik|mKIAA0176	potassium channel tetramerisation domain containing 5	protein-coding
common_peak2-32100-35-42-0.00510550376040619-0.30358472802154	chr9	99567902	99568941	+	0	NA	3' UTR (NM_028258, exon 16 of 16)	3' UTR (NM_028258, exon 16 of 16)	38407	NM_028258	72507	Mm.221455	NM_028258	ENSMUSG00000037784	Dzip1l	2610524A10Rik|AI663976	DAZ interacting protein 1-like	protein-coding
common_peak2-28538-15-9-0.690236655668294-0.732381977911291	chr5	3289894	3290339	+	0	NA	Intergenic	Intergenic	-54196	NM_009873	12571	Mm.31672	NM_009873	ENSMUSG00000040274	Cdk6	5830411I20|AI504062|Crk2	cyclin-dependent kinase 6	protein-coding
unique_peak1-6811-9-0-3.18961340640422-3.01029995663981	chr8	72435436	72435972	+	0	NA	exon (NM_001286450, exon 12 of 13)	exon (NM_001286450, exon 12 of 13)	-9247	NM_023312	67184	Mm.21162	NM_023312	ENSMUSG00000036199	Ndufa13	2700054G14Rik|AU022060|CDA016|CGI-39|GRIM-19|Grim19	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13	protein-coding
unique_peak1-1966-14-4-1.57728806547028-2.4322161449009	chr14	114840583	114841251	+	0	NA	Intergenic	MTB|LTR|MaLR	-390270	NR_045661	75822	Mm.410813	NR_045661		4930524C18Rik	-	RIKEN cDNA 4930524C18 gene	ncRNA
unique_peak2-35309-0-6--3.64748585253182-1.56314192529759	chr17	14289807	14290114	+	0	NA	Intergenic	L1_Mus1|LINE|L1	50878	NM_172826	240025	Mm.79993	NM_172826	ENSMUSG00000048826	Dact2	2900084M21Rik|A630024E20|Dpr2|Frd2|dapper2	dapper homolog 2, antagonist of beta-catenin (xenopus)	protein-coding
common_peak1-14082-10-13--0.450939577048835-0.386243247519795	chr2	121506136	121506729	+	0	NA	intron (NM_172673, intron 1 of 14)	intron (NM_172673, intron 1 of 14)	126361	NM_172673	228564	Mm.121514	NM_172673	ENSMUSG00000027238	Frmd5	1500032A09Rik|5830442F04|A930004K21Rik|R75430	FERM domain containing 5	protein-coding
unique_peak1-5324-9-2-1.60465090568306-1.87199725847353	chr5	81037110	81037636	+	0	NA	Intergenic	Lx|LINE|L1	-413245	NM_198702	319387	Mm.273631	NM_198702	ENSMUSG00000037605	Lphn3	5430402I23Rik|CIRL-3|D130075K09Rik|Gm1379|LEC3|mKIAA0768	latrophilin 3	protein-coding
common_peak2-26679-7-13--1.00826409175941-0.697979855752659	chr2	122765415	122765906	+	0	NA	Intergenic	Lx8|LINE|L1	157925	NM_021507	59010	Mm.28986	NM_021507	ENSMUSG00000005803	Sqrdl	0610039J17Rik|4930557M22Rik	sulfide quinone reductase-like (yeast)	protein-coding
unique_peak1-5589-18-0-4.31291915122835-NA	chr6	39058769	39059587	+	0	NA	intron (NM_172893, intron 3 of 11)	Lx8|LINE|L1	9170	NM_172893	243771	Mm.268462	NM_172893	ENSMUSG00000038507	Parp12	9930021O16|AA409132|AA536654|ARTD12|PARP-12|Zc3hdc1	poly (ADP-ribose) polymerase family, member 12	protein-coding
common_peak1-16379-18-17-0.142994149786039-0.353907621462753	chr5	123075325	123076286	+	0	NA	Intergenic	Intergenic	-11278	NM_009879	12589	Mm.10125	NM_009879	ENSMUSG00000029469	Ift81	AW060663|Cdv-1|Cdv-1r|Cdv1	intraflagellar transport 81	protein-coding
unique_peak1-614-10-7-0.356415345008769-1.12966497611638	chr10	22312852	22313351	+	0	NA	Intergenic	Intergenic	-51716	NM_178934	353169	Mm.473705	NM_178934	ENSMUSG00000037490	Slc2a12	GLUT-12|Glut12	solute carrier family 2 (facilitated glucose transporter), member 12	protein-coding
unique_peak2-39279-1-6--2.43441193227435-1.56314192529759	chr8	121932672	121933127	+	0	NA	intron (NM_019966, intron 4 of 4)	intron (NM_019966, intron 4 of 4)	14107	NM_019966	56690	Mm.423037	NM_019966	ENSMUSG00000074064	Mlycd	AI324784|Mcd	malonyl-CoA decarboxylase	protein-coding
common_peak2-30764-66-57-0.660502669298269-2.10309224529148	chr7	123097707	123099022	+	0	NA	intron (NM_001025559, intron 1 of 15)	RSINE1|SINE|B4	40236	NM_011445	20679	Mm.323365	NM_011445	ENSMUSG00000051910	Sox6	AI987981|SOX-LZ	SRY (sex determining region Y)-box 6	protein-coding
unique_peak2-37935-4-7--1.02346051385325-1.09384600808989	chr5	146917072	146917450	+	0	NA	intron (NM_001105160, intron 11 of 12)	GA-rich|Low_complexity|Low_complexity	26427	NM_001105160	100041449	Mm.301900	NM_001105160	ENSMUSG00000061292	Cyp3a59	ENSMUSG00000061292	cytochrome P450, family 3, subfamily a, polypeptide 59	protein-coding
common_peak2-29461-35-21-0.971938639825207-1.97718016252453	chr6	29347343	29348086	+	0	NA	Intergenic	Intergenic	-1212	NM_145574	232664	Mm.251303	NM_145574	ENSMUSG00000029769	Ccdc136	4921511K06Rik|BC006583	coiled-coil domain containing 136	protein-coding
common_peak2-25257-30-29-0.262784813883354-0.465043498729215	chr18	66002044	66002890	+	0	NA	Intergenic	Intergenic	-30666	NM_175012	225642	Mm.20298	NM_175012	ENSMUSG00000024517	Grp	BLP	gastrin releasing peptide	protein-coding
unique_peak1-4099-8-0-3.00522241794757-2.70926996097583	chr2	73485353	73485825	+	0	NA	intron (NM_175752, intron 1 of 6)	L1Md_F2|LINE|L1	12891	NM_175752	108699	Mm.257073	NM_029716	ENSMUSG00000056486	Chn1	0610007I19Rik|0710001E19Rik|1700112L09Rik|2900046J01Rik|AI413815|ARHGAP2	chimerin 1	protein-coding
unique_peak1-5091-10-6-0.549060422951165-1.21398586181642	chr4	149171903	149172428	+	0	NA	Intergenic	(GGGAGA)n|Simple_repeat|Simple_repeat	-23789	NM_027460	70556	Mm.41877	NM_027460	ENSMUSG00000028982	Slc25a33	5730438N18Rik|Pnc1	solute carrier family 25, member 33	protein-coding
unique_peak1-3504-12-2-2.06381348436648-2.79529063155376	chr19	15835927	15836481	+	0	NA	Intergenic	Intergenic	162908	NM_001205339	107272	Mm.289936	NM_177420	ENSMUSG00000024640	Psat1	D8Ertd814e|EPIP|PSA|Psat	phosphoserine aminotransferase 1	protein-coding
unique_peak1-6335-7-3-0.799090830298189-1.23214870625617	chr7	47109055	47109567	+	0	NA	Intergenic	ORR1A2|LTR|MaLR	336175	NM_001004139	70227	Mm.333800	NM_001004139	ENSMUSG00000068959	Zfp619	3000002G13Rik	zinc finger protein 619	protein-coding
unique_peak2-33571-3-5--0.998945590680433-0.96108193396963	chr11	85324392	85324615	+	0	NA	intron (NM_001166643, intron 15 of 23)	intron (NM_001166643, intron 15 of 23)	157837	NM_001166643	192197	Mm.287663	NM_138681	ENSMUSG00000059439	Bcas3	1500019F07Rik|2610028P08Rik|AU021018|BC028339|K20D4|rudhira	breast carcinoma amplified sequence 3	protein-coding
common_peak2-24609-9-6-0.382258484346616-1.11707584880836	chr17	33756472	33756910	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-9346	NR_034153	328801	Mm.181488	NM_026712	ENSMUSG00000073423	Zfp414	0610030H11Rik|Znf414	zinc finger protein 414	protein-coding
common_peak2-30270-15-28--0.845816244571916-1.02077663956385	chr7	16207588	16208283	+	0	NA	Intergenic	L1_Mur3|LINE|L1	17191	NM_145707	246791	Mm.425362	NM_145707	ENSMUSG00000066772	Obox3	Ohx	oocyte specific homeobox 3	protein-coding
unique_peak2-32622-6-13--1.2419568116773-1.58711810488664	chr1	118369301	118370022	+	0	NA	intron (NM_001077425, intron 19 of 23)	intron (NM_001077425, intron 19 of 23)	787947	NM_001077425	636808	Mm.101576	NM_001077425	ENSMUSG00000070695	Cntnap5a	Caspr5-1|EG636808	contactin associated protein-like 5A	protein-coding
unique_peak2-33340-2-5--1.50241675698448-1.08602067057793	chr11	22661805	22662232	+	0	NA	Intergenic	(GGAA)n|Simple_repeat|Simple_repeat	97717	NM_016888	53625	Mm.395495	NM_016888	ENSMUSG00000051650	B3gnt2	AA408337|AA409404|AW260308|B3Galt6|B3gnt1|BGnT-1|BGnT-2|BGnT1|BGnT2|Beta3gnt	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2	protein-coding
common_peak1-15229-22-23-0.0623216043662485-0.319130838712456	chr4	3574492	3575174	+	0	NA	Intergenic	Intergenic	-8820	NR_040643	70143	Mm.417835	NR_040643	ENSMUSG00000085394	2210414B05Rik	-	RIKEN cDNA 2210414B05 gene	ncRNA
common_peak2-25430-22-11-1.06232160436625-1.51503956548638	chr19	3832874	3833380	+	0	NA	Intergenic	Intergenic	-18646	NM_001271496	12660	Mm.225505	NM_013490	ENSMUSG00000024843	Chka	CK|CK/EK-alpha|Chetk-alpha|Chk|ChoK|EK|EtnK-alpha	choline kinase alpha	protein-coding
unique_peak2-32787-4-5--0.608423014574403-0.909929411522249	chr1	180569038	180569352	+	0	NA	intron (NM_001161665, intron 2 of 14)	intron (NM_001161665, intron 2 of 14)	109939	NM_001161665	269152	Mm.129727	NM_177724	ENSMUSG00000026494	Kif26b	4832420M10|BC056349|D230039L06Rik	kinesin family member 26B	protein-coding
common_peak1-16738-68-20-2.17764335651954-11.8435702720766	chr6	31113560	31115230	+	0	NA	intron (NR_110471, intron 2 of 3)	intron (NR_110471, intron 2 of 3)	54079	NR_110470	232685	Mm.443019	NM_144555		Lincpint	MNCb-1768|Pint|linc-Pint	long intergenic non-protein coding RNA, Trp53 induced transcript	ncRNA
common_peak1-19516-16-6-1.31090872021046-1.49151883326344	chrX	169925558	169926285	+	0	NA	Intergenic	Intergenic	-3509072	NR_029457	654820	Mm.34441	NM_001039559	ENSMUSG00000072844	G530011O06Rik	-	RIKEN cDNA G530011O06 gene	ncRNA
unique_peak1-5807-8-2-1.42025991722641-1.65811743852845	chr6	67104869	67105336	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	-111871	NM_001113564	66870	Mm.240490	NM_025814	ENSMUSG00000036371	Serbp1	1200009K13Rik|9330147J08Rik|AL022786|Pairbp1	serpine1 mRNA binding protein 1	protein-coding
common_peak1-16056-95-115-0.289934349896442-0.918122728223815	chr5	43781175	43783029	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-124706	NM_001135172	109323	Mm.275553	NM_175425	ENSMUSG00000061535	C1qtnf7	5530401N20Rik|8430425G24Rik|Ctrp7	C1q and tumor necrosis factor related protein 7	protein-coding
common_peak1-11969-22-13-0.8399291830298-1.1381569562463	chr17	6812448	6813282	+	0	NA	TTS (NM_001166630).3	TTS (NM_001166630).3	6369	NM_001166630	100040563	Mm.457381	NM_001166630		Dynlt1c	100040603|Dynlt1d	dynein light chain Tctex-type 1C	protein-coding
common_peak2-23658-25-25-0.161410187204014-0.36542888694933	chr15	85042309	85043458	+	0	NA	intron (NM_010180, intron 1 of 16)	B4A|SINE|B4	6445	NM_010180	14114	Mm.297992	NM_010180	ENSMUSG00000006369	Fbln1	-	fibulin 1	protein-coding
common_peak2-21457-10-18--0.891512168434816-0.804350088532826	chr11	86962065	86962866	+	0	NA	intron (NM_197987, intron 7 of 23)	intron (NM_197987, intron 7 of 23)	21888	NM_197987	68729	Mm.17436	NM_197987	ENSMUSG00000018548	Trim37	1110032A10Rik|2810004E07Rik|AI848587|AU043018|MUL|TEF3|mKIAA0898	tripartite motif-containing 37	protein-coding
unique_peak1-7216-9-1-2.18961340640422-2.31132995230379	chr9	70072592	70073105	+	0	NA	intron (NM_181072, intron 1 of 27)	MER5A1|DNA|MER1_type	17691	NM_181072	71602	Mm.249311	NM_181072	ENSMUSG00000032220	Myo1e	2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3	myosin IE	protein-coding
common_peak2-20671-4-10--1.48289213249054-1.5150158574804	chr10	85102835	85103157	+	0	NA	intron (NM_028709, intron 11 of 16)	intron (NM_028709, intron 11 of 16)	41840	NM_001017525	74007	Mm.36544	NM_028709	ENSMUSG00000020042	Btbd11	6330404E16Rik	BTB (POZ) domain containing 11	protein-coding
unique_peak1-1303-27-6-2.18419102883763-4.54209996799533	chr11	120238699	120239783	+	0	NA	intron (NM_027980, intron 2 of 9)	intron (NM_027980, intron 2 of 9)	819	NM_027980	71885	Mm.274890	NM_027980	ENSMUSG00000025384	2310003H01Rik	Faap100	RIKEN cDNA 2310003H01 gene	protein-coding
common_peak1-10491-14-13-0.0918612383000403-0.332077462497413	chr14	27131607	27132335	+	0	NA	Intergenic	Intergenic	-45062	NR_038005	71106	Mm.158564	NR_038005	ENSMUSG00000021874	4933413J09Rik	GCSE	RIKEN cDNA 4933413J09 gene	ncRNA
unique_peak2-37698-1-4--1.94898510510411-1.10720996964787	chr5	100670863	100671242	+	0	NA	Intergenic	Intergenic	31341	NR_040679	69571	Mm.396412	NR_040679		2310034O05Rik	-	RIKEN cDNA 2310034O05 gene	ncRNA
unique_peak2-39089-0-8--4.01005593191652-2.05605744720049	chr8	76881330	76881625	+	0	NA	Intergenic	Intergenic	-515596	NM_027837	71597	Mm.158735	NM_027837	ENSMUSG00000031621	Isx	9130012O13Rik|Pix-1	intestine specific homeobox	protein-coding
common_peak1-15254-11-6-0.701338662194009-1.32595962126035	chr4	15249712	15250198	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	56988	NM_181401	100201	Mm.394111	NM_181401	ENSMUSG00000043252	Tmem64	9630015D15Rik|AI790744|AV300874	transmembrane protein 64	protein-coding
unique_peak1-453-7-1-1.79909083029819-1.80617997398389	chr1	167233850	167234447	+	0	NA	intron (NM_001081126, intron 2 of 6)	intron (NM_001081126, intron 2 of 6)	8251	NM_001081126	240888	Mm.329929	NM_001081126		Gpr161	Gm208|Gm208Gpr|vl	G protein-coupled receptor 161	protein-coding
unique_peak2-35033-7-12--0.901348887842903-1.31827279259406	chr15	103357941	103358688	+	0	NA	intron (NM_001285890, intron 13 of 14)	intron (NM_001285890, intron 13 of 14)	10109	NM_021391	58200	Mm.143788	NM_021391	ENSMUSG00000022490	Ppp1r1a	0610038N18Rik|I-1	protein phosphatase 1, regulatory (inhibitor) subunit 1A	protein-coding
common_peak2-26991-10-8-0.186490343566457-1.078512453669	chr2	168104438	168104818	+	0	NA	Intergenic	Intergenic	-9797	NM_001081134	241794	Mm.425102	NM_001081134	ENSMUSG00000074575	Kcng1	AW536275|OTTMUSG00000016048	potassium voltage-gated channel, subfamily G, member 1	protein-coding
common_peak1-12624-21-25--0.130950452874856-0.305461879681376	chr18	32837065	32837904	+	0	NA	intron (NR_045381, intron 4 of 4)	Lx5|LINE|L1	-117796	NM_001048207	71683	Mm.292145	NM_027863	ENSMUSG00000090523	Gypc	0610037F22Rik|Cd236r	glycophorin C	protein-coding
common_peak2-24493-28-22-0.529397163764449-0.781990829058356	chr17	25188282	25189030	+	0	NA	intron (NM_134126, intron 16 of 29)	intron (NM_134126, intron 16 of 29)	29403	NM_001001183	407831	Mm.34379	NM_001001183	ENSMUSG00000024168	Tmem204	-	transmembrane protein 204	protein-coding
common_peak1-18111-19-14-0.495796731053168-0.607095980551316	chr8	3467247	3468329	+	0	NA	promoter-TSS (NM_026951)	promoter-TSS (NM_026951)	-140	NM_026951	69129	Mm.45279	NM_026951		Pex11g	1810022F11Rik|1810049N02Rik|Pex11c|Pex11gamma	peroxisomal biogenesis factor 11 gamma	protein-coding
common_peak2-21895-22-30--0.30691220529947-0.399869693390336	chr12	3806533	3807649	+	0	NA	promoter-TSS (NM_001271753)	promoter-TSS (NM_001271753)	-69	NM_001271753	13435	Mm.5001	NM_007872	ENSMUSG00000020661	Dnmt3a	MmuIIIA	DNA methyltransferase 3A	protein-coding
unique_peak2-32987-0-8--4.01005593191652-2.05605744720049	chr10	59923048	59923658	+	0	NA	intron (NR_045556, intron 14 of 68)	intron (NR_045556, intron 14 of 68)	60879	NM_001164374	100302688	Mm.444135	NM_001164374	ENSMUSG00000090439	Gm17455	-	predicted gene, 17455	protein-coding
common_peak1-11701-45-36-0.650904659715922-1.42954500397923	chr16	31592621	31594302	+	0	NA	Intergenic	Intergenic	-70068	NM_001252435	13383	Mm.382	NM_007862	ENSMUSG00000022770	Dlg1	B130052P05Rik|Dlgh1|E-dlg/SAP97|SAP-97|SAP97|mKIAA4187	discs, large homolog 1 (Drosophila)	protein-coding
common_peak2-29752-325-361-0.787647573659561-15.8390783163046	chr6	86524710	86527822	+	0	NA	Intergenic	Intergenic	48871	NR_037961	72012	Mm.349174	NR_037960	ENSMUSG00000097048	1600020E01Rik	-	RIKEN cDNA 1600020E01 gene	ncRNA
common_peak1-12866-11-4-1.18676548936425-1.68134727924692	chr18	75909497	75910042	+	0	NA	Intergenic	B1F|SINE|Alu	-52419	NM_201354	269037	Mm.36745	NM_201354	ENSMUSG00000052928	Ctif	Gm672	CBP80/20-dependent translation initiation factor	protein-coding
common_peak2-21562-6-6--0.241956811677302-0.947717972411649	chr11	97310749	97311121	+	0	NA	promoter-TSS (NM_021493)	promoter-TSS (NM_021493)	-539	NM_021493	58996	Mm.394118	NM_021493	ENSMUSG00000049807	Arhgap23	A330041B18Rik	Rho GTPase activating protein 23	protein-coding
common_peak1-15290-45-70--0.289389094159811-0.545679753374787	chr4	41348706	41349760	+	0	NA	intron (NM_024241, intron 8 of 12)	intron (NM_024241, intron 8 of 12)	53204	NM_023305	67123	Mm.289795	NM_023305	ENSMUSG00000028437	Ubap1	2700092A01Rik|NAG20|UBAP-1|Ubap	ubiquitin-associated protein 1	protein-coding
common_peak2-29960-22-29--0.259606490521114-0.36542888694933	chr6	118454612	118455952	+	0	NA	intron (NM_001081112, intron 33 of 33)	MTD|LTR|MaLR	-25991	NM_011763	22750	Mm.106970	NM_011763	ENSMUSG00000072623	Zfp9	1810048F22Rik|AU016736|Krox-4|Zfp-9|mszf79-2	zinc finger protein 9	protein-coding
common_peak2-22935-11-15--0.491306415748387-0.435191258261915	chr14	47353811	47354440	+	0	NA	Intergenic	Intergenic	-26091	NM_028222	72391	Mm.272394	NM_028222	ENSMUSG00000037628	Cdkn3	2410006H10Rik|KAP	cyclin-dependent kinase inhibitor 3	protein-coding
unique_peak2-33977-7-11--0.785871670422967-1.21681515183528	chr12	84970136	84970622	+	0	NA	Intergenic	MERVL-int|LTR|ERVL	-2805	NM_027349	67039	Mm.46005	NM_027349	ENSMUSG00000010608	Rbm25	2600011C06Rik|2610015J01Rik|A130095G20Rik|AI159652|AL023075|AU043498|RNPC7	RNA binding motif protein 25	protein-coding
common_peak1-10152-44-51-0.121453116427443-0.373449689110125	chr13	36117183	36118408	+	0	NA	intron (NM_201358, intron 2 of 2)	intron (NM_201358, intron 2 of 2)	58020	NM_029628	76487	Mm.44745	NM_029628	ENSMUSG00000050423	Ppp1r3g	1600032L17Rik	protein phosphatase 1, regulatory (inhibitor) subunit 3G	protein-coding
unique_peak1-4370-32-11-1.6941295184985-3.91086877283603	chr2	157410939	157412425	+	0	NA	Intergenic	MMETn-int|LTR|ERVK	-19585	NM_016916	53619	Mm.480461	NM_016916	ENSMUSG00000067787	Blcap	AI462828|Bc10	bladder cancer associated protein homolog (human)	protein-coding
unique_peak1-6791-13-10-0.319040412000471-0.446472590016315	chr8	69848472	69849311	+	0	NA	Intergenic	Intergenic	-165766	NM_008673	17960	Mm.14125	NM_008673	ENSMUSG00000025588	Nat1	Nat-1	N-acetyl transferase 1	protein-coding
common_peak1-8984-15-24--0.631691439219068-0.650819692678081	chr11	59471996	59472587	+	0	NA	Intergenic	Intergenic	-3706	NM_201245	26936	Mm.2402	NM_012027	ENSMUSG00000005417	Mprip	9530046C02|AA536749|AI647711|C76423|RIP3|Rhoip3|mKIAA0864|p116Rip	myosin phosphatase Rho interacting protein	protein-coding
unique_peak1-3911-12-2-2.06381348436648-2.79529063155376	chr2	24363297	24363895	+	0	NA	Intergenic	Intergenic	-32477	NM_011040	18510	Mm.2533	NM_011040	ENSMUSG00000026976	Pax8	Pax-8	paired box 8	protein-coding
unique_peak1-3034-9-0-3.18961340640422-3.01029995663981	chr18	62177033	62177519	+	0	NA	Intergenic	Intergenic	64547	NM_172628	225608	Mm.262320	NM_172628	ENSMUSG00000045629	Sh3tc2	D430044G18Rik	SH3 domain and tetratricopeptide repeats 2	protein-coding
common_peak1-12320-8-20--1.38709500483119-1.45476480588849	chr17	47629041	47629550	+	0	NA	intron (NM_022015, intron 7 of 8)	intron (NM_022015, intron 7 of 8)	9941	NM_022015	63856	Mm.275901	NM_022015	ENSMUSG00000023980	Taf8	AW260255|Tbn	TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factorq	protein-coding
common_peak2-22702-85-79-0.633475153237288-2.48525259113198	chr13	100650662	100651767	+	0	NA	Intergenic	ORR1B2|LTR|MaLR	19424	NM_013732	27220	Mm.75498	NM_013732	ENSMUSG00000021647	Cartpt	Cart	CART prepropeptide	protein-coding
unique_peak2-37972-0-6--3.64748585253182-1.56314192529759	chr6	134184704	134185122	+	0	NA	intron (NM_007961, intron 4 of 7)	intron (NM_007961, intron 4 of 7)	-161434	NM_025778	66813	Mm.474472	NM_025778	ENSMUSG00000030200	Bcl2l14	4930452K23Rik|4933405K19Rik|9030625M01Rik|AI429211|Bclg	BCL2-like 14 (apoptosis facilitator)	protein-coding
common_peak2-25456-17-14-0.311405742596519-0.466170754204149	chr19	4201034	4201595	+	0	NA	intron (NM_011237, intron 2 of 10)	intron (NM_011237, intron 2 of 10)	289	NM_011237	19367	Mm.277629	NM_011237	ENSMUSG00000024824	Rad9a	Rad9	RAD9 homolog A	protein-coding
common_peak2-24133-19-31--0.597312673338314-0.721233599456203	chr16	35768737	35769523	+	0	NA	exon (NM_153550, exon 1 of 9)	exon (NM_153550, exon 1 of 9)	312	NM_153550	224132	Mm.24094	NM_153550	ENSMUSG00000022848	Dirc2	RCC4	disrupted in renal carcinoma 2 (human)	protein-coding
unique_peak2-34292-3-8--1.58390809140159-1.39487600375387	chr13	75366760	75367234	+	0	NA	Intergenic	Intergenic	139562	NM_013628	18548	Mm.1333	NM_013628	ENSMUSG00000021587	Pcsk1	Nec-1|Nec1|PC1|PC3|Phpp-1|SPC3	proprotein convertase subtilisin/kexin type 1	protein-coding
unique_peak1-4570-9-1-2.18961340640422-2.31132995230379	chr3	52651844	52652372	+	0	NA	Intergenic	Intergenic	79480	NR_040555	622124	Mm.389434	NR_040555		Gm20750	-	predicted gene, 20750	ncRNA
common_peak1-18452-28-22-0.529397163764449-0.781990829058356	chr8	83715196	83716104	+	0	NA	Intergenic	MMERVK10C-int|LTR|ERVK	-150811	NM_001024617	234515	Mm.324468	NM_001024617	ENSMUSG00000037940	Inpp4b	E130107I17Rik	inositol polyphosphate-4-phosphatase, type II	protein-coding
common_peak2-21788-55-26-1.44973236898923-5.51648386939563	chr11	117941360	117942379	+	0	NA	intron (NM_001167746, intron 42 of 80)	intron (NM_001167746, intron 42 of 80)	48664	NM_001167746	69926	Mm.473893	NM_001167746	ENSMUSG00000033987	Dnah17	2810003K23Rik|Dnahc17|Dnahcl1|Gm1178|mKIAA3028	dynein, axonemal, heavy chain 17	protein-coding
common_peak1-9813-34-72--0.807756031878752-2.03570638876314	chr12	69681175	69682452	+	0	NA	Intergenic	L1MA7|LINE|L1	578360	NM_009093	20090	Mm.379006	NM_009093	ENSMUSG00000034892	Rps29	-	ribosomal protein S29	protein-coding
common_peak2-22163-28-39--0.2689689750659-0.409729630423047	chr12	87471602	87472363	+	0	NA	intron (NM_029601, intron 3 of 7)	RLTR10|LTR|ERVK	-38309	NR_046081	328136	Mm.312050	NR_046081	ENSMUSG00000097543	Gm805	-	predicted gene 805	ncRNA
common_peak1-9382-81-101-0.19962426103707-0.556258020955848	chr11	98775518	98777482	+	0	NA	exon (NM_011799, exon 8 of 12)	exon (NM_011799, exon 8 of 12)	7035	NM_011799	23834	Mm.20912	NM_011799	ENSMUSG00000017499	Cdc6	CDC18L	cell division cycle 6	protein-coding
common_peak1-18270-13-17--0.391452970804544-0.364171515310935	chr8	34952997	34953551	+	0	NA	intron (NM_001042674, intron 4 of 7)	intron (NM_001042674, intron 4 of 7)	87061	NM_019733	19663	Mm.323997	NM_019733	ENSMUSG00000031586	Rbpms	2010300K22Rik|2700019M19Rik|AU017537|RBP-MS|hermes	RNA binding protein gene with multiple splicing	protein-coding
common_peak1-15641-25-39--0.460078189542257-0.621525249893804	chr4	134852621	134853331	+	0	NA	Intergenic	B1F2|SINE|Alu	-24301	NM_013885	29876	Mm.257765	NM_013885	ENSMUSG00000037242	Clic4	D0Jmb3|TU-74|mc3s5|mtCLIC	chloride intracellular channel 4 (mitochondrial)	protein-coding
common_peak1-8638-16-29--0.788626953340457-0.98872314135509	chr10	121903584	121904435	+	0	NA	Intergenic	Lx2|LINE|L1	18454	NM_016847	54140	Mm.4351	NM_016847	ENSMUSG00000020123	Avpr1a	AVPR|Avpr1|V1a|V1aR	arginine vasopressin receptor 1A	protein-coding
unique_peak1-1767-22-7-1.6472841050874-2.63337704757512	chr13	111966058	111967010	+	0	NA	Intergenic	Intergenic	53105	NR_045908	73129	Mm.417826	NR_045908		3110015C05Rik	-	RIKEN cDNA 3110015C05 gene	ncRNA
unique_peak1-6379-19-1-3.40268732666169-5.15699611159533	chr7	71105117	71106250	+	0	NA	Intergenic	Intergenic	-21882	NM_021366	50794	Mm.240473	NM_021366	ENSMUSG00000052040	Klf13	0610043C13Rik|9430029L20Rik|Bteb3|FKLF-2|FKLF2|NSLP1|RFLAT-1|RFLAT1	Kruppel-like factor 13	protein-coding
unique_peak2-34801-11-27--1.29866133780599-1.81053432848961	chr15	72660077	72661319	+	0	NA	intron (NM_001164641, intron 17 of 17)	intron (NM_001164641, intron 17 of 17)	-19944	NR_002864	353342	Mm.440245	NR_002864		Peg13	-	paternally expressed 13	ncRNA
unique_peak1-7238-20-3-2.48807478459119-3.8429424127101	chr9	75961889	75962587	+	0	NA	intron (NM_173731, intron 7 of 8)	MTD|LTR|MaLR	99226	NM_205844	404194	Mm.213862	NM_205844	ENSMUSG00000059383	Gfral	AY457637|Gral	GDNF family receptor alpha like	protein-coding
common_peak2-24901-13-8-0.608547029195456-0.660903317613904	chr17	84107957	84108428	+	0	NA	intron (NM_001171053, intron 2 of 13)	intron (NM_001171053, intron 2 of 13)	2689	NM_001171052	116871	Mm.277668	NM_054082	ENSMUSG00000055817	Mta3	1110002J22Rik|mKIAA1266	metastasis associated 3	protein-coding
common_peak1-11027-14-15--0.100783839642355-0.301029995663982	chr15	39112022	39112714	+	0	NA	intron (NM_053271, intron 3 of 26)	L1Md_F2|LINE|L1	82536	NM_053271	116838	Mm.309296	NM_053271		Rims2	2810036I15Rik|AW048769|RIM2|Rab3ip2|Rim2(+40A)|Rim2(+44A)|Rim2(+4A)|Serg2|Syt3-rs|mKIAA0751	regulating synaptic membrane exocytosis 2	protein-coding
common_peak1-14851-30-44--0.322177686837802-0.475038482441584	chr3	94974339	94975281	+	0	NA	exon (NM_011351, exon 13 of 17)	exon (NM_011351, exon 13 of 17)	6549	NM_011351	20360	Mm.23662	NM_011351	ENSMUSG00000038777	Sema6c	Semay|mKIAA1869	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	protein-coding
unique_peak1-464-10-5-0.771452844287613-1.33892459842472	chr1	171111067	171111564	+	0	NA	Intergenic	L1Md_T|LINE|L1	350280	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
unique_peak2-36245-4-9--1.34538860874061-1.36011389749466	chr2	40127510	40127958	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-1045876	NM_024209	67857	Mm.389242	NM_024209		Ppp6c	2310003C10Rik	protein phosphatase 6, catalytic subunit	protein-coding
common_peak2-26773-8-8--0.164702583494742-1.00793137938329	chr2	143988675	143989119	+	0	NA	Intergenic	Intergenic	26129	NM_001033778	433481	Mm.330630	NM_001033778		Gm5535	EG433481	predicted gene 5535	protein-coding
common_peak1-18667-12-9-0.326847890200276-0.459837087125828	chr8	117280762	117281476	+	0	NA	intron (NM_019573, intron 8 of 8)	intron (NM_019573, intron 8 of 8)	317567	NM_019573	80707	Mm.440420	NM_019573	ENSMUSG00000004637	Wwox	5330426P09Rik|9030416C10Rik|WOX1	WW domain-containing oxidoreductase	protein-coding
unique_peak1-2625-13-5-1.19350952991661-1.95509489018123	chr16	38620739	38621423	+	0	NA	exon (NM_020260, exon 7 of 12)	exon (NM_020260, exon 7 of 12)	58154	NM_026407	67846	Mm.310476	NM_026407	ENSMUSG00000002845	Tmem39a	2610033C09Rik	transmembrane protein 39a	protein-coding
common_peak1-9152-41-43-0.241717086211363-0.486454540233427	chr11	76945159	76946316	+	0	NA	intron (NM_176965, intron 7 of 17)	intron (NM_176965, intron 7 of 17)	-53798	NM_001012309	237859	Mm.156195	NM_001012309	ENSMUSG00000037958	Ccdc55	8030451K07|AI851076|AL022898|NSpr70|NSrp70|Nsrp1	coiled-coil domain containing 55	protein-coding
unique_peak2-39476-1-6--2.43441193227435-1.56314192529759	chr9	57418155	57418475	+	0	NA	intron (NM_022813, intron 1 of 8)	ID_B1|SINE|B4	9564	NM_022813	24044	Mm.286069	NM_022813	ENSMUSG00000040188	Scamp2	AI875466|Sc2	secretory carrier membrane protein 2	protein-coding
common_peak2-23941-12-8-0.478850983645327-0.562038191119709	chr16	13589281	13589762	+	0	NA	intron (NM_028761, intron 21 of 23)	intron (NM_028761, intron 21 of 23)	-69009	NR_037997	70100	Mm.158330	NR_037997		2310015D24Rik	-	RIKEN cDNA 2310015D24 gene	ncRNA
common_peak1-11304-29-15-1.11229008061511-2.08778000015696	chr15	83592428	83593289	+	0	NA	Intergenic	Intergenic	-17595	NM_172610	223726	Mm.36395	NM_172610	ENSMUSG00000041708	Mpped1	6230403M19|AW456965|D15Bwg0669e	metallophosphoesterase domain containing 1	protein-coding
common_peak2-22000-31-31-0.225238670813123-0.416139936131877	chr12	55124273	55125120	+	0	NA	intron (NM_013780, intron 7 of 11)	intron (NM_013780, intron 7 of 11)	180165	NM_028133	112407	Mm.133037	NM_028133	ENSMUSG00000035105	Egln3	2610021G09Rik|AI505553|AI648162|Hif-p4h-3|Phd3|SM-20	egl-9 family hypoxia-inducible factor 3	protein-coding
unique_peak1-5702-11-2-1.92373108353046-2.32232533660526	chr6	35424463	35424991	+	0	NA	Intergenic	L1Md_F2|LINE|L1	65161	NM_008098	14489	Mm.182746	NM_008098	ENSMUSG00000029840	Mtpn	5033418D15Rik|Gcdp|V1	myotrophin	protein-coding
common_peak2-29251-9-6-0.382258484346616-1.11707584880836	chr5	139877100	139877464	+	0	NA	intron (NM_028469, intron 2 of 4)	B2_Mm2|SINE|B2	-5059	NM_177000	319772	Mm.440271	NM_177000		C130050O18Rik	-	RIKEN cDNA C130050O18 gene	protein-coding
common_peak1-9192-20-8-1.31814978314888-1.77631109801764	chr11	79739190	79740034	+	0	NA	Intergenic	B1_Mm|SINE|Alu	36277	NM_144826	216987	Mm.274961	NM_144826	ENSMUSG00000035575	Utp6	4732497O03Rik|HCA66	UTP6, small subunit (SSU) processome component, homolog (yeast)	protein-coding
common_peak1-8746-6-10--0.894033508256995-1.21398586181642	chr11	4265947	4266357	+	0	NA	intron (NM_029458, intron 10 of 10)	MTD|LTR|MaLR	74933	NM_029458	75828	Mm.159592	NM_029458	ENSMUSG00000020419	Hormad2	4930529M09Rik	HORMA domain containing 2	protein-coding
unique_peak1-4877-8-1-2.00522241794757-2.05605744720049	chr4	25541686	25542251	+	0	NA	3' UTR (NM_010243, exon 3 of 3)	3' UTR (NM_010243, exon 3 of 3)	185182	NM_010243	14348	Mm.39101	NM_010243	ENSMUSG00000055373	Fut9	AI746471|AU067636|mFUT9|mFuc-TIX	fucosyltransferase 9	protein-coding
unique_peak1-900-17-7-1.21829633820504-1.55050753388977	chr11	35963550	35964445	+	0	NA	intron (NM_001290702, intron 8 of 27)	intron (NM_001290702, intron 8 of 27)	-170406	NM_170779	211652	Mm.31267	NM_170779		Wwc1	AA408228|AU017197|BC037006|Kibra|mKIAA0869	WW, C2 and coiled-coil domain containing 1	protein-coding
common_peak1-16234-49-63-0.00628382302518382-0.302739834127522	chr5	102069265	102070395	+	0	NA	Intergenic	(GAAA)n|Simple_repeat|Simple_repeat	23900	NM_144955	18096	Mm.193072	NM_144955		Nkx6-1	NKX6A|Nkx6.1	NK6 homeobox 1	protein-coding
common_peak1-11094-56-38-0.950193606576994-2.98092681788371	chr15	59680260	59681398	+	0	NA	Intergenic	Charlie7|DNA|MER1_type	-54315	NR_045076	100503021	Mm.402924	NR_045076		Gm19510	-	predicted gene, 19510	ncRNA
common_peak2-22925-21-29--0.337401330342283-0.403610417161439	chr14	46787554	46788418	+	0	NA	Intergenic	L1Md_F2|LINE|L1	84284	NR_002875	218963	Mm.282093	NR_002875		Gm1821	-	ubiquitin pseudogene	pseudo
common_peak2-25948-23-10-1.26233588587178-1.90052685918624	chr19	47331029	47331513	+	0	NA	exon (NM_001163480, exon 5 of 6)	exon (NM_001163480, exon 5 of 6)	16808	NR_105961	102466782		NR_105961		Mir6995	mmu-mir-6995	microRNA mir-6995	ncRNA
common_peak2-26820-31-40--0.13231333380496-0.326417267106726	chr2	152226634	152227733	+	0	NA	Intergenic	Intergenic	-3401	NM_011438	20667	Mm.28424	NM_011438	ENSMUSG00000051817	Sox12	2010205A02Rik	SRY (sex determining region Y)-box 12	protein-coding
unique_peak2-35222-8-15--0.994777582052429-0.771068449301683	chr16	91729351	91730168	+	0	NA	promoter-TSS (NM_133679)	promoter-TSS (NM_133679)	143	NM_010587	16443	Mm.40546	NM_010587	ENSMUSG00000022957	Itsn1	AA517634|AA545208|AI316805|AI839402|AI848451|Ehsh1|Ese1|Itsn|Sh3p17	intersectin 1 (SH3 domain protein 1A)	protein-coding
unique_peak1-6485-9-0-3.18961340640422-3.01029995663981	chr7	112362258	112362816	+	0	NA	Intergenic	Lx5|LINE|L1	-9682	NM_147069	259072	Mm.377823	NM_147069	ENSMUSG00000048425	Olfr686	MOR35-1	olfactory receptor 686	protein-coding
common_peak2-28131-12-10-0.189344366450341-0.386243247519795	chr4	97466031	97466515	+	0	NA	intron (NM_010905, intron 2 of 10)	intron (NM_010905, intron 2 of 10)	21956	NM_010905	18027	Mm.31274	NM_010905	ENSMUSG00000028565	Nfia	1110047K16Rik|9430022M17Rik|CTF|NF1-A|NF1A	nuclear factor I/A	protein-coding
common_peak2-21801-5-8--0.874305337448166-1.10484139239135	chr11	118364812	118365174	+	0	NA	intron (NM_001285438, intron 6 of 13)	intron (NM_001285438, intron 6 of 13)	26719	NM_172573	217364	Mm.473963	NM_172573	ENSMUSG00000033857	Engase	C130099A03|D230014K01Rik	endo-beta-N-acetylglucosaminidase	protein-coding
common_peak2-29203-14-27--0.908138761699959-1.05601013496724	chr5	136632597	136633335	+	0	NA	intron (NM_178751, intron 2 of 2)	IAPEz-int|LTR|ERVK	13560	NM_178751	269717	Mm.308396	NM_178751	ENSMUSG00000039747	Orai2	A730041O15Rik|Tmem142b	ORAI calcium release-activated calcium modulator 2	protein-coding
common_peak1-8429-43-77--0.502839033338546-1.10096426460187	chr10	77251341	77253131	+	0	NA	intron (NM_001287074, intron 1 of 11)	BC1_Mm|scRNA|scRNA	9642	NM_001205034	100503388	Mm.482880	NM_001205034	ENSMUSG00000096380	Gm19668	-	predicted gene, 19668	protein-coding
common_peak2-25216-7-7--0.200909169701811-0.97990265578305	chr18	61210976	61211349	+	0	NA	intron (NM_001146268, intron 1 of 22)	intron (NM_001146268, intron 1 of 22)	6358	NM_008809	18596	Mm.4146	NM_008809	ENSMUSG00000024620	Pdgfrb	AI528809|CD140b|PDGFR-1|Pdgfr	platelet derived growth factor receptor, beta polypeptide	protein-coding
common_peak1-12681-10-47--2.22854715571239-5.96347229815761	chr18	38296508	38297153	+	0	NA	Intergenic	L1_Mus3|LINE|L1	72586	NM_029357	75599	Mm.36560	NM_029357	ENSMUSG00000051375	Pcdh1	2010005A06Rik|AI585920	protocadherin 1	protein-coding
unique_peak2-37446-7-8--0.370834171144123-1.00793137938329	chr4	155734294	155734676	+	0	NA	Intergenic	Intergenic	-125519	NM_198305	231003	Mm.423038	NM_198305	ENSMUSG00000078484	Klhl17	AL022703|BC058738	kelch-like 17	protein-coding
unique_peak2-35618-3-11--1.99894559068043-1.95434855131066	chr17	84509818	84510330	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	32074	NR_045458	74473	Mm.399575	NR_045458		4933433H22Rik	-	RIKEN cDNA 4933433H22 gene	ncRNA
common_peak2-25998-23-12-1.02132778636799-1.44787515926925	chr19	55423269	55423810	+	0	NA	intron (NM_016862, intron 3 of 7)	intron (NM_016862, intron 3 of 7)	32992	NM_001293686	53611	Mm.258637	NM_016862	ENSMUSG00000024983	Vti1a	1110014F16Rik|1110018K19Rik|4921537J05Rik|MVti1|MVti1a|Vti1|Vti1-rp2	vesicle transport through interaction with t-SNAREs 1A	protein-coding
unique_peak1-2166-13-4-1.45654393575041-2.23384849113406	chr15	60888509	60889186	+	0	NA	Intergenic	Intergenic	-136022	NM_001081067	117586	Mm.291499	NM_001081067	ENSMUSG00000022347	A1bg	C44	alpha-1-B glycoprotein	protein-coding
common_peak1-14058-22-30--0.30691220529947-0.399869693390336	chr2	119551556	119552434	+	0	NA	intron (NM_030112, intron 9 of 17)	B1_Mus2|SINE|Alu	-16078	NM_146125	228550	Mm.65337	NM_146125	ENSMUSG00000027296	Itpka	-	inositol 1,4,5-trisphosphate 3-kinase A	protein-coding
common_peak1-18750-32-18-1.03116450577607-2.02129774107186	chr8	126522788	126524210	+	0	NA	intron (NM_133966, intron 4 of 4)	intron (NM_133966, intron 4 of 4)	-16477	NM_019552	56199	Mm.274243	NM_019552	ENSMUSG00000031974	Abcb10	Abc-me|Abcb12	ATP-binding cassette, sub-family B (MDR/TAP), member 10	protein-coding
unique_peak1-7042-17-6-1.41094141614743-1.84350559086818	chr8	127964577	127965305	+	0	NA	intron (NM_001081337, intron 15 of 20)	intron (NM_001081337, intron 15 of 20)	51669	NM_001081337	244668	Mm.271668	NM_001081337	ENSMUSG00000001995	Sipa1l2	BC058408|mKIAA1389	signal-induced proliferation-associated 1 like 2	protein-coding
unique_peak2-36960-13-15--0.221527969362231-0.308519316180257	chr3	109027140	109027905	+	0	NA	Intergenic	Lx7|LINE|L1	101455	NM_172685	229731	Mm.33574	NM_172685	ENSMUSG00000040322	Slc25a24	2610016M12Rik	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24	protein-coding
unique_peak1-5280-8-1-2.00522241794757-2.05605744720049	chr5	66046898	66047328	+	0	NA	intron (NM_001081321, intron 8 of 31)	intron (NM_001081321, intron 8 of 31)	41982	NM_001081321	71521	Mm.278974	NM_027818	ENSMUSG00000029202	Pds5a	9030416H16Rik|E230024D05Rik|mKIAA0648	PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	protein-coding
common_peak2-32413-10-33--1.73104749624157-3.11713623526324	chrX	159372205	159372966	+	0	NA	intron (NM_018737, intron 10 of 18)	intron (NM_018737, intron 10 of 18)	29946	NM_009789	12309	Mm.6891	NM_009789	ENSMUSG00000040808	S100g	AU042539|CABP1|CaBP-D9K|Cabp9k|Calb3	S100 calcium binding protein G	protein-coding
common_peak1-16965-48-18-1.72299963779123-6.05053282271098	chr6	86218567	86220267	+	0	NA	intron (NM_031199, intron 3 of 5)	B4A|SINE|B4	74172	NM_031199	21802	Mm.137222	NM_031199	ENSMUSG00000029999	Tgfa	wa-1|wa1	transforming growth factor alpha	protein-coding
common_peak1-11979-23-24-0.0779113147343562-0.318406410381916	chr17	8283818	8284831	+	0	NA	intron (NM_001033442, intron 2 of 3).2	intron (NM_001033442, intron 2 of 3).2	9769	NM_001033442	381059	Mm.490353	NM_001033442		Gm1604b	ENSMUSG00000073470|Gm1604	predicted gene 1604b	protein-coding
common_peak2-25781-27-38--0.293856267967013-0.412842868820461	chr19	34192063	34193003	+	0	NA	intron (NM_023903, intron 8 of 9)	intron (NM_023903, intron 8 of 9)	17100	NM_023903	78753	Mm.195937	NM_023903	ENSMUSG00000056078	Lipm	4632427C23Rik|AW227514|Lipl3	lipase, family member M	protein-coding
unique_peak2-33810-1-9--2.94898510510411-2.31132995230379	chr11	121181584	121182028	+	0	NA	Intergenic	Intergenic	33955	NM_025793	66840	Mm.103986	NM_025793	ENSMUSG00000025173	Wdr45b	0610008N23Rik|AA408735|D16Bwg0193e|WIPI-3|Wdr45l	WD repeat domain 45B	protein-coding
common_peak1-18863-20-28--0.369906210536379-0.457753417732779	chr9	21546819	21547687	+	0	NA	intron (NM_010700, intron 12 of 17)	intron (NM_010700, intron 12 of 17)	17477	NM_026282	67629	Mm.295642	NM_026282	ENSMUSG00000074476	Spc24	2410030K01Rik|AV109292|Spbc24	SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
common_peak1-18016-8-19--1.31670567693979-1.30305656033811	chr7	141455220	141455707	+	0	NA	Intergenic	Intergenic	-38683	NM_007400	11489	Mm.439714	NM_007400	ENSMUSG00000054555	Adam12	Mltna|mKIAA4001	a disintegrin and metallopeptidase domain 12 (meltrin alpha)	protein-coding
unique_peak1-5771-21-6-1.76213434320863-2.81226952737395	chr6	53620542	53621466	+	0	NA	intron (NM_172728, intron 3 of 6)	intron (NM_172728, intron 3 of 6)	97636	NM_172728	231991	Mm.321138	NM_172728	ENSMUSG00000053007	Creb5	Crebpa|D430026C09Rik	cAMP responsive element binding protein 5	protein-coding
common_peak2-21115-25-35--0.308075096097206-0.423354874519378	chr11	52448436	52449212	+	0	NA	Intergenic	Intergenic	-129384	NM_177059	320027	Mm.44518	NM_177059		Fstl4	B230374F23Rik|SPIG1|mKIAA1061	follistatin-like 4	protein-coding
common_peak2-19529-27-28-0.133564955767664-0.358978896303361	chr1	72236531	72237146	+	0	NA	intron (NM_001005423, intron 2 of 4)	URR1B|DNA|MER1_type	22043	NM_001005423	381269	Mm.422636	NM_001005423	ENSMUSG00000039395	Mreg	Gm974|Wdt2|dsu	melanoregulin	protein-coding
common_peak1-9879-33-37-0.0834100490819436-0.326417267106726	chr12	84316677	84317809	+	0	NA	intron (NM_001267625, intron 10 of 10)	MIR|SINE|MIR	-277101	NR_046045	74283	Mm.398247	NR_046045		1700085C21Rik	-	RIKEN cDNA 1700085C21 gene	ncRNA
unique_peak1-965-9-2-1.60465090568306-1.87199725847353	chr11	61228363	61228835	+	0	NA	Intergenic	Intergenic	-37022	NM_026183	67473	Mm.100741	NM_026183	ENSMUSG00000010122	Slc47a1	1300013J15Rik|AI036982|MATE1|mMATE1	solute carrier family 47, member 1	protein-coding
common_peak2-19859-9-7-0.18961340640422-1.05908390183068	chr1	91823945	91824334	+	0	NA	TTS (NM_010262)	TTS (NM_010262)	3612	NM_010262	14472	Mm.204730	NM_010262		Gbx2	D130058E05Rik|Gbx-2|MMoxA|Stra7	gastrulation brain homeobox 2	protein-coding
common_peak2-19924-12-12--0.0516637330534535-0.309718203022949	chr1	125695212	125695826	+	0	NA	intron (NM_199021, intron 3 of 25)	ETnERV2-int|LTR|ERVK	246617	NM_199021	269109	Mm.483255	NM_199021	ENSMUSG00000036815	Dpp10	6430601K09Rik|DPP X|Dprp3	dipeptidylpeptidase 10	protein-coding
common_peak1-9505-40-34-0.529692665806132-1.04433310181892	chr11	113649047	113650282	+	0	NA	intron (NM_172800, intron 44 of 44)	intron (NM_172800, intron 44 of 44)	-36535	NM_001163346	56699	Mm.293378	NM_020006	ENSMUSG00000041598	Cdc42ep4	1500041M20Rik|Borg4|CEP4	CDC42 effector protein (Rho GTPase binding) 4	protein-coding
common_peak1-12000-64-103--0.234993316432488-0.557095317016001	chr17	13682469	13684385	+	0	NA	non-coding (NR_045437, exon 4 of 4)	non-coding (NR_045437, exon 4 of 4)	-30895	NR_030763	272667	Mm.444718	NR_030763	ENSMUSG00000079711	Smok4a	4930513D10Rik|Smok2c	sperm motility kinase 4A	pseudo
common_peak1-16653-88-127-0.0154124091705325-0.304422955819319	chr6	100286280	100288340	+	0	NA	Intergenic	Intergenic	-49958	NM_019743	56353	Mm.321633	NM_019743	ENSMUSG00000072872	Rybp	2410018J24Rik|DEDAF|YEAF1	RING1 and YY1 binding protein	protein-coding
common_peak2-30191-16-17--0.0516613591742505-0.301029995663984	chr7	29981928	29982898	+	0	NA	intron (NM_001164658, intron 11 of 27)	B1_Mur1|SINE|Alu	16639	NM_001164658	320225	Mm.349382	NM_001039721	ENSMUSG00000049676	Catsperg1	A230107C01Rik|Catsperg	catsper channel auxiliary subunit gamma 1	protein-coding
common_peak1-14976-36-108--1.28886323860917-6.10515912964155	chr3	106721505	106722476	+	0	NA	Intergenic	L1VL2|LINE|L1	-96515	NM_146489	258482	Mm.377527	NM_146489	ENSMUSG00000043529	Olfr266	MOR122-2	olfactory receptor 266	protein-coding
common_peak1-12704-73-121--0.238342331137665-0.615456870466516	chr18	44827953	44829441	+	0	NA	intron (NR_026853, intron 2 of 4)	intron (NR_026853, intron 2 of 4)	-6777	NM_001085374	328949	Mm.312511	NM_001033406	ENSMUSG00000071856	Mcc	D18Ertd451e|E330037C19	mutated in colorectal cancers	protein-coding
common_peak2-19711-13-35--1.39145297080454-2.32006591355687	chr1	64690973	64691623	+	0	NA	Intergenic	L1MD3|LINE|L1	-27556	NM_025964	67099	Mm.46394	NM_025964	ENSMUSG00000025956	Mettl21a	2310038H17Rik|AI464204|Fam119a	methyltransferase like 21A	protein-coding
common_peak2-30802-19-27--0.404667595395917-0.464317215211849	chr7	127471371	127472297	+	0	NA	promoter-TSS (NM_177213)	promoter-TSS (NM_177213)	-364	NM_177213	320631	Mm.78330	NM_177213	ENSMUSG00000054746	Abca15	4930500I12Rik	ATP-binding cassette, sub-family A (ABC1), member 15	protein-coding
common_peak2-27566-13-14--0.12841856497075-0.301029995663977	chr3	98025907	98026654	+	0	NA	intron (NM_026328, intron 1 of 5)	intron (NM_026328, intron 1 of 5)	201	NM_026328	67709	Mm.46306	NM_026328	ENSMUSG00000027876	Reg4	2010002L15Rik|GISP|RELP	regenerating islet-derived family, member 4	protein-coding
common_peak2-24531-51-91--0.44863813045444-1.09572805394914	chr17	27037673	27039644	+	0	NA	Intergenic	Intergenic	-15378	NM_053173	16580	Mm.491138	NM_016761	ENSMUSG00000024301	Kifc5b	Hset|KNSL2|Kifc5a	kinesin family member C5B	protein-coding
common_peak1-19306-6-7--0.434601889619698-0.97990265578305	chr9	121995654	121996145	+	0	NA	Intergenic	Intergenic	-30485	NM_001164572	20623	Mm.257989	NM_133741	ENSMUSG00000038145	Snrk	2010012F07Rik|AI448042|AW547029|E030034B15|R74830|mKIAA0096	SNF related kinase	protein-coding
common_peak1-12712-9-8-0.0196884049619079-1.03275496310833	chr18	46908706	46909256	+	0	NA	intron (NM_009681, intron 1 of 5)	intron (NM_009681, intron 1 of 5)	7410	NM_009681	11777	Mm.312536	NM_009681	ENSMUSG00000024480	Ap3s1	[s]3A	adaptor-related protein complex 3, sigma 1 subunit	protein-coding
unique_peak2-37887-3-6--1.22133801201688-1.08602067057793	chr5	139861956	139862192	+	0	NA	intron (NM_030258, intron 1 of 1)	intron (NM_030258, intron 1 of 1)	-3784	NM_001038703	80290	Mm.270003	NM_030258	ENSMUSG00000044197	Gpr146	BC003323|PGR8	G protein-coupled receptor 146	protein-coding
unique_peak2-34848-4-9--1.34538860874061-1.36011389749466	chr15	76198879	76199320	+	0	NA	promoter-TSS (NM_021555)	promoter-TSS (NM_021555)	-229	NM_021555	59053	Mm.133202	NM_021555	ENSMUSG00000022554	Hgh1	Brp16|D15Ertd741e|Fam203a	HGH1 homolog	protein-coding
unique_peak2-34701-0-8--4.01005593191652-2.05605744720049	chr15	27943814	27944216	+	0	NA	intron (NM_001081302, intron 1 of 56)	intron (NM_001081302, intron 1 of 56)	11588	NM_001081302	223435	Mm.485422	NM_001081302	ENSMUSG00000022263	Trio	6720464I07Rik|AA408740|Solo	triple functional domain (PTPRF interacting)	protein-coding
common_peak2-27495-40-49-0.0151194929763738-0.309716464454027	chr3	94886241	94887454	+	0	NA	intron (NM_001293707, intron 1 of 14)	intron (NM_001293707, intron 1 of 14)	24005	NM_001293707	18720	Mm.296409	NM_008847	ENSMUSG00000028126	Pip5k1a	PI4P5K-I[a]|PIP5K1-alpha|PIP5KIalpha|Pipk5a	phosphatidylinositol-4-phosphate 5-kinase, type 1 alpha	protein-coding
common_peak2-22896-15-26--0.742722751607812-0.823046386575433	chr14	32513481	32514144	+	0	NA	3' UTR (NM_001024604, exon 28 of 28)	3' UTR (NM_001024604, exon 28 of 28)	59569	NM_025295	26363	Mm.282679	NM_025295	ENSMUSG00000021900	Btd	-	biotinidase	protein-coding
unique_peak2-36886-3-15--2.41398308995928-2.80787975886178	chr3	95624986	95625403	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-2318	NM_001081293	75137	Mm.196275	NM_028328	ENSMUSG00000028106	Rprd2	2810036A19Rik|4930535B03Rik|6720469I21Rik|AL022841|AL022940|AU021304|BB077382|mKIAA0460	regulation of nuclear pre-mRNA domain containing 2	protein-coding
common_peak1-12299-98-196--0.420283126025826-1.82627352759046	chr17	46555209	46556823	+	0	NA	3' UTR (NM_207671, exon 10 of 10)	3' UTR (NM_207671, exon 10 of 10)	-9875	NM_053250	114570	Mm.25168	NM_053250	ENSMUSG00000023968	Crip3	TLP|TLP-A|TLP-B|Tlmp	cysteine-rich protein 3	protein-coding
common_peak2-21133-45-87--0.599073593292426-1.56901764734008	chr11	54437862	54438866	+	0	NA	intron (NM_175258, intron 9 of 27)	B3|SINE|B2	28716	NM_001252497	192786	Mm.254404	NM_175258	ENSMUSG00000037533	Rapgef6	A530068K01|AI844632|BB085664|C030018K18Rik|PDZ-GEF2|Pdzgef2|RA-GEF-2|Ragef2|mKIAA4052	Rap guanine nucleotide exchange factor (GEF) 6	protein-coding
common_peak1-13020-40-41-0.266658259972337-0.537526587463064	chr19	5366048	5367606	+	0	NA	promoter-TSS (NM_011793)	promoter-TSS (NM_011793)	14	NM_027236	69860	Mm.299167	NM_027236	ENSMUSG00000024841	Eif1ad	2010003J03Rik|AI131644	eukaryotic translation initiation factor 1A domain containing	protein-coding
unique_peak2-35692-2-10--2.37688587490062-2.09384600808989	chr18	24116397	24116879	+	0	NA	intron (NM_027007, intron 3 of 3)	intron (NM_027007, intron 3 of 3)	3449	NM_027007	69256	Mm.218343	NM_027007	ENSMUSG00000024276	Zfp397	2810411K16Rik|6720480F11Rik|AI461664	zinc finger protein 397	protein-coding
unique_peak1-6784-14-3-1.89921616035764-2.80787975886178	chr8	66586667	66587436	+	0	NA	intron (NM_009390, intron 5 of 20)	intron (NM_009390, intron 5 of 20)	97739	NM_009390	21892	Mm.418367	NM_009390	ENSMUSG00000053626	Tll1	Tll|Tll-1	tolloid-like	protein-coding
common_peak2-21283-22-25--0.0531556130536872-0.301029995663976	chr11	70451710	70452324	+	0	NA	promoter-TSS (NM_010326)	promoter-TSS (NM_010326)	-607	NM_010326	14723	Mm.377085	NM_010326	ENSMUSG00000050675	Gp1ba	GPIba|GPIbalpha	glycoprotein 1b, alpha polypeptide	protein-coding
common_peak1-15669-37-64--0.496374741542636-0.943512743618327	chr4	136469518	136470880	+	0	NA	Intergenic	B3A|SINE|B2	-15440	NM_007572	12259	Mm.439957	NM_007572	ENSMUSG00000036887	C1qa	AI255395|C1q	complement component 1, q subcomponent, alpha polypeptide	protein-coding
common_peak2-23273-8-16--1.08224042330277-0.891319708951328	chr15	25983577	25984107	+	0	NA	Intergenic	Intergenic	69721	NM_144523	52521	Mm.29145	NM_144523	ENSMUSG00000052253	Zfp622	1110033B05Rik|D15Ertd806e|ZPR9|Znf622	zinc finger protein 622	protein-coding
common_peak1-15339-64-95--0.119516099012553-0.359187433159323	chr4	48539718	48541295	+	0	NA	Intergenic	L1M2|LINE|L1	-12312	NM_001145925	66665	Mm.140749	NM_028137	ENSMUSG00000039693	Msantd3	2410046L14Rik|2810429P03Rik|5730528L13Rik|Mysantd3	Myb/SANT-like DNA-binding domain containing 3	protein-coding
common_peak1-14506-109-208--0.321199450193681-1.27637732566318	chr3	19310048	19312426	+	0	NA	Intergenic	Intergenic	-97358	NM_001163536	66326	Mm.45615	NM_025489	ENSMUSG00000027606	Dnajc5b	1700008A05Rik	DnaJ (Hsp40) homolog, subfamily C, member 5 beta	protein-coding
common_peak2-29948-19-17-0.232762325219374-0.392630012299441	chr6	116649255	116650072	+	0	NA	intron (NM_178768, intron 2 of 4)	intron (NM_178768, intron 2 of 4)	17113	NM_178768	319776	Mm.133120	NM_178768	ENSMUSG00000048108	Tmem72	C230095G01Rik	transmembrane protein 72	protein-coding
common_peak2-22699-21-35--0.600435736176077-0.748982406290541	chr13	100103362	100104246	+	0	NA	intron (NM_026873, intron 4 of 9)	intron (NM_026873, intron 4 of 9)	10829	NM_026873	68927	Mm.276502	NM_026873	ENSMUSG00000021650	Ptcd2	1190005P08Rik	pentatricopeptide repeat domain 2	protein-coding
common_peak1-13901-17-20--0.174021084573723-0.306598483909156	chr2	78868242	78868882	+	0	NA	Intergenic	B3A|SINE|B2	159358	NM_009454	22193	Mm.1485	NM_009454		Ube2e3	Ubce4|ubcM2	ubiquitin-conjugating enzyme E2E 3	protein-coding
common_peak1-13404-72-125--0.308696110627599-0.807938574271429	chr19	47579238	47580666	+	0	NA	intron (NM_175360, intron 9 of 9)	B4|SINE|B4	-7520	NR_045322	100503104	Mm.442735	NR_045322	ENSMUSG00000097990	Gm19557	-	predicted gene, 19557	ncRNA
common_peak1-12063-12-12--0.0516637330534535-0.309718203022949	chr17	23726302	23726841	+	0	NA	intron (NM_011747, intron 1 of 5)	intron (NM_011747, intron 1 of 5)	9883	NM_011747	22654	Mm.40326	NM_011747	ENSMUSG00000062012	Zfp13	4933429B21|AI835008|Krox-8|Rhit|Zfp-13	zinc finger protein 13	protein-coding
unique_peak1-2737-18-4-1.99099105634099-2.82951996911245	chr16	97683907	97684827	+	0	NA	non-coding (NR_003520, exon 1 of 9)	non-coding (NR_003520, exon 1 of 9)	145	NM_010846	17857	Mm.33996	NM_010846	ENSMUSG00000000386	Mx1	AI893580|Mx|Mx-1	MX dynamin-like GTPase 1	protein-coding
common_peak1-17539-9-13--0.617741515653384-0.459837087125828	chr7	28952327	28952864	+	0	NA	Intergenic	MTC-int|LTR|MaLR	-2172	NM_007991	14113	Mm.4595	NM_007991	ENSMUSG00000046865	Fbl	AL022665|FIB|FLRN|RNU3IP1	fibrillarin	protein-coding
common_peak2-25019-10-13--0.450939577048835-0.386243247519795	chr18	24020073	24020435	+	0	NA	intron (NM_001162941, intron 5 of 7)	intron (NM_001162941, intron 5 of 7)	57783	NM_153058	212307	Mm.132237	NM_153058	ENSMUSG00000024277	Mapre2	AI314113|C820009F03Rik|D18Abb1e|EB1|EB2|RP1	microtubule-associated protein, RP/EB family, member 2	protein-coding
common_peak1-9328-13-5-1.19350952991661-1.95509489018123	chr11	95258854	95259373	+	0	NA	Intergenic	MER53|DNA|hAT	12877	NM_016752	110172	Mm.4593	NM_016752		Slc35b1	Ugalt2	solute carrier family 35, member B1	protein-coding
common_peak2-23130-24-18-0.545282389324131-0.776879508296351	chr14	101788944	101789575	+	0	NA	Intergenic	MYSERV6-int|LTR|ERVK	-189973	NM_029680	76627	Mm.31415	NM_029680	ENSMUSG00000042888	Prr30	1700110M21Rik	proline rich 30	protein-coding
common_peak1-14246-26-15-0.927899092158462-1.40782320807777	chr2	154602843	154603763	+	0	NA	Intergenic	Intergenic	-13543	NM_001139512	19383	Mm.221440	NM_023130	ENSMUSG00000027593	Raly	AI663842|Merc	hnRNP-associated with lethal yellow	protein-coding
common_peak1-7489-14-16--0.188246680892695-0.308035960714963	chr1	9747859	9748460	+	0	NA	intron (NR_040462, intron 2 of 3)	intron (NR_040462, intron 2 of 3)	-9696	NM_173443	70675	Mm.274493	NM_173443		Vcpip1	4932442A08|5730421J18Rik|5730538E15Rik|VCIP135|mKIAA1850	valosin containing protein (p97)/p47 complex interacting protein 1	protein-coding
unique_peak2-32468-2-7--1.91745425626332-1.45399745587252	chr1	21078776	21079202	+	0	NA	Intergenic	GA-rich|Low_complexity|Low_complexity	-9683	NM_177409	170829	Mm.185680	NM_177409		Tram2	C330003D03Rik	translocating chain-associating membrane protein 2	protein-coding
unique_peak2-39666-4-6--0.830815435910851-0.989110657569874	chr9	107619984	107620417	+	0	NA	Intergenic	Intergenic	-7394	NM_011349	20350	Mm.12903	NM_011349	ENSMUSG00000034684	Sema3f	Sema4|Semak	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F	protein-coding
unique_peak1-4989-18-6-1.50556422917075-2.02801025126771	chr4	116144206	116144936	+	0	NA	Intergenic	Intergenic	-7785	NM_008641	17776	Mm.9287	NM_008641	ENSMUSG00000003810	Mast2	MAST205|Mtssk	microtubule associated serine/threonine kinase 2	protein-coding
common_peak1-19130-22-24-0.00342791531268016-0.305461879681376	chr9	78481945	78482649	+	0	NA	intron (NM_153098, intron 2 of 32)	intron (NM_153098, intron 2 of 32)	18944	NM_153098	235505	Mm.32955	NM_153098	ENSMUSG00000046186	Cd109	9930012E15Rik|AI480638|GARP	CD109 antigen	protein-coding
common_peak2-25702-4-7--1.02346051385325-1.09384600808989	chr19	19247146	19247559	+	0	NA	Intergenic	Intergenic	-61666	NM_001043354	225998	Mm.234641	NM_146095	ENSMUSG00000036192	Rorb	Nr1f2|RZR-beta|RZRB|Rorbeta	RAR-related orphan receptor beta	protein-coding
common_peak2-29962-17-11-0.633333837483882-0.769930178837768	chr6	118561586	118562274	+	0	NA	intron (NM_001159533, intron 37 of 46)	intron (NM_001159533, intron 37 of 46)	-49656	NM_001081112	232339	Mm.276116	NM_001081112	ENSMUSG00000007827	Ankrd26	5730521P14Rik|BC008111|mKIAA1074	ankyrin repeat domain 26	protein-coding
common_peak1-13743-9-5-0.604650905683064-1.21398586181642	chr2	32606982	32607495	+	0	NA	intron (NR_045535, intron 10 of 12)	intron (NR_045535, intron 10 of 12)	-5516	NR_045485	30933	Mm.200695	NM_152800	ENSMUSG00000009563	Tor2a	Prosalusin	torsin family 2, member A	protein-coding
unique_peak1-1192-10-1-2.35641534500877-2.57096726280955	chr11	102581829	102582344	+	0	NA	Intergenic	RLTR10C|LTR|ERVK	-23047	NM_025918	52715	Mm.277638	NM_025918	ENSMUSG00000020925	Ccdc43	2610001E01Rik|D11Ertd707e	coiled-coil domain containing 43	protein-coding
common_peak2-28936-20-39--0.83385331029617-1.34355844763204	chr5	96804578	96806006	+	0	NA	intron (NM_175473, intron 1 of 73)	intron (NM_175473, intron 1 of 73)	2318	NM_175473	231470	Mm.291120	NM_175473	ENSMUSG00000034687	Fras1	E130113P14Rik|bl|mKIAA1500	Fraser syndrome 1 homolog (human)	protein-coding
unique_peak1-760-27-8-1.82162094945292-3.64934937127727	chr10	120646042	120647336	+	0	NA	Intergenic	L1Md_F2|LINE|L1	101556	NM_029057	74694	Mm.233833	NM_029057	ENSMUSG00000052302	Tbc1d30	4930505D03Rik	TBC1 domain family, member 30	protein-coding
common_peak1-9330-135-112-0.937306440625274-7.58667662368048	chr11	95384035	95385513	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-8895	NM_130858	104079	Mm.22970	NM_130858	ENSMUSG00000046719	Nxph3	-	neurexophilin 3	protein-coding
unique_peak2-38636-2-6--1.72480917832092-1.26211192963361	chr7	82464791	82465180	+	0	NA	intron (NR_045814, intron 2 of 2)	intron (NR_045814, intron 2 of 2)	-10837	NM_153579	64176	Mm.273082	NM_153579	ENSMUSG00000053025	Sv2b	A830038F04Rik|AI850768|mKIAA0735	synaptic vesicle glycoprotein 2 b	protein-coding
common_peak2-21876-20-33--0.599388056659146-0.781990829058356	chr12	75595247	75596221	+	0	NA	Intergenic	MLT1F2|LTR|MaLR	197273	NM_198866	386753	Mm.341686	NM_198866	ENSMUSG00000029878	Dbpht2	Spot2	DNA binding protein with his-thr domain	protein-coding
common_peak1-14549-25-32--0.182544214013348-0.333081040816759	chr3	32708607	32709606	+	0	NA	Intergenic	MTD|LTR|MaLR	-7442	NM_001013024	72607	Mm.316153	NM_001013024		Usp13	2700071E21Rik|AI848077|ISOT3|IsoT-3	ubiquitin specific peptidase 13 (isopeptidase T-3)	protein-coding
common_peak2-22044-13-8-0.608547029195456-0.660903317613904	chr12	69422946	69423359	+	0	NA	Intergenic	Intergenic	-652894	NR_033146	100316870	Mm.379794	NR_033146		Gm17821	-	DDB1 and CUL4 associated factor 5 pseudogene	pseudo
unique_peak1-115-8-1-2.00522241794757-2.05605744720049	chr1	59480790	59481302	+	0	NA	Intergenic	Intergenic	-57945	NM_008057	14369	Mm.297906	NM_008057	ENSMUSG00000041075	Fzd7	Fz7	frizzled homolog 7 (Drosophila)	protein-coding
unique_peak2-34047-6-14--1.34149248522822-1.01572999746118	chr12	113013883	113014407	+	0	NA	exon (NM_001081959, exon 4 of 16)	exon (NM_001081959, exon 4 of 16)	17066	NM_001025361	16593	Mm.278357	NM_008450	ENSMUSG00000021288	Klc1	AI874768|Kns2	kinesin light chain 1	protein-coding
common_peak1-19437-35-27-0.6240153364049-1.10223211335955	chrX	94212282	94213347	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-55121	NM_001033361	245526	Mm.336164	NM_001033361	ENSMUSG00000031212	Pgr15l	-	G protein-coupled receptor 15-like	protein-coding
unique_peak2-37580-4-7--1.02346051385325-1.09384600808989	chr5	36353354	36353749	+	0	NA	Intergenic	Intergenic	117583	NM_027373	70292	Mm.125167	NM_027373	ENSMUSG00000029094	Afap1	2600003E23Rik|9630044L16Rik|AI848729|Afap|mKIAA3018	actin filament associated protein 1	protein-coding
common_peak1-10827-20-9-1.16614668970383-1.52222891542741	chr14	101798037	101798823	+	0	NA	Intergenic	Intergenic	-199144	NM_029680	76627	Mm.31415	NM_029680	ENSMUSG00000042888	Prr30	1700110M21Rik	proline rich 30	protein-coding
unique_peak1-1052-7-0-2.79909083029819-2.40823996531185	chr11	79305982	79306493	+	0	NA	intron (NM_010897, intron 36 of 57)	intron (NM_010897, intron 36 of 57)	-8704	NR_045305	104522	Mm.436987	NR_045305	ENSMUSG00000091523	AU040972	AU040954	expressed sequence AU040972	ncRNA
common_peak2-24842-39-41-0.223443824140393-0.455649802789393	chr17	74526417	74528150	+	0	NA	Intergenic	Intergenic	-130027	NM_053188	94224	Mm.38933	NM_053188	ENSMUSG00000038541	Srd5a2	5ART2|S5AR 2	steroid 5 alpha-reductase 2	protein-coding
unique_peak1-6136-15-7-1.01216475055566-1.08658567012551	chr6	134990109	134990849	+	0	NA	Intergenic	Intergenic	-25201	NM_181444	232431	Mm.23575	NM_181444	ENSMUSG00000046733	Gprc5a	Rai3|Raig1	G protein-coupled receptor, family C, group 5, member A	protein-coding
common_peak1-8028-38-86--0.871490836550198-2.67345263472825	chr1	170214779	170215606	+	0	NA	intron (NM_001291508, intron 2 of 7)	intron (NM_001291508, intron 2 of 7)	147108	NM_001291508	18514	Mm.43358	NM_008783	ENSMUSG00000052534	Pbx1	2310056B04Rik|D230003C07Rik|Pbx-1	pre B cell leukemia homeobox 1	protein-coding
unique_peak1-2076-10-4-1.03448725012141-1.5150158574804	chr15	36854879	36855438	+	0	NA	Intergenic	MT2A|LTR|ERVL	81999	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
common_peak1-11426-38-22-1.04789070324152-2.44914526326141	chr15	99723170	99724521	+	0	NA	Intergenic	RLTR14|LTR|ERV1	-17958	NM_001113545	65970	Mm.33207	NM_023063	ENSMUSG00000023022	Lima1	Eplin	LIM domain and actin binding 1	protein-coding
unique_peak2-33350-1-9--2.94898510510411-2.31132995230379	chr11	29840048	29840554	+	0	NA	intron (NM_146016, intron 2 of 41)	L1VL4|LINE|L1	85732	NM_146016	237711	Mm.445271	NM_146016	ENSMUSG00000044072	Eml6	2900083P10Rik|C230094A16Rik|EMAP-6	echinoderm microtubule associated protein like 6	protein-coding
common_peak2-25433-18-15-0.312919151228352-0.456667090758524	chr19	3851081	3851695	+	0	NA	promoter-TSS (NM_001271496)	promoter-TSS (NM_001271496)	-385	NM_001271496	12660	Mm.225505	NM_013490	ENSMUSG00000024843	Chka	CK|CK/EK-alpha|Chetk-alpha|Chk|ChoK|EK|EtnK-alpha	choline kinase alpha	protein-coding
common_peak1-11746-30-18-0.921747896048288-1.62918185056051	chr16	35870704	35871719	+	0	NA	intron (NM_001039530, intron 1 of 16)	CpG	257	NM_001039530	547253	Mm.244406	NM_001039530	ENSMUSG00000034422	Parp14	1600029O10Rik|ARTD8|BC021340|CoaSt6|mKIAA1268	poly (ADP-ribose) polymerase family, member 14	protein-coding
unique_peak2-39232-7-6--0.00826409175941478-0.97990265578305	chr8	111338541	111338954	+	0	NA	intron (NM_007496, intron 3 of 9)	intron (NM_007496, intron 3 of 9)	100203	NM_007496	11906	Mm.416972	NM_007496	ENSMUSG00000038872	Zfhx3	A230102L03Rik|Atbf1|WBP9|mKIAA4228	zinc finger homeobox 3	protein-coding
common_peak1-13730-93-108-0.342885538729343-1.0974520975334	chr2	32150600	32152153	+	0	NA	intron (NM_133852, intron 3 of 26)	B1_Mur2|SINE|Alu	7603	NM_001080968	99412	Mm.106376	NM_133852	ENSMUSG00000002546	Golga2	AW555139|GM130|mKIAA4150	golgi autoantigen, golgin subfamily a, 2	protein-coding
unique_peak1-6155-12-1-2.64877598508764-3.36932189928148	chr6	137456961	137457594	+	0	NA	intron (NM_001271595, intron 14 of 20)	intron (NM_001271595, intron 14 of 20)	11139	NM_001271589	13860	Mm.235346	NM_007945	ENSMUSG00000015766	Eps8	AW261790	epidermal growth factor receptor pathway substrate 8	protein-coding
unique_peak2-35374-6-11--1.01956439034085-1.32595962126035	chr17	28350910	28351360	+	0	NA	intron (NM_027185, intron 1 of 10)	ID_B1|SINE|B4	6412	NM_027185	23853	Mm.204731	NM_027185	ENSMUSG00000002257	Def6	2410003F05Rik|6430538D02Rik|AV094905|Ibp|Slat|Slat2|Slat6	differentially expressed in FDCP 6	protein-coding
common_peak2-30652-14-12-0.198776442216552-0.373562084705529	chr7	99215185	99215758	+	0	NA	intron (NM_001243046, intron 2 of 14)	intron (NM_001243046, intron 2 of 14)	4567	NM_001243046	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
common_peak2-25131-80-93-0.295986914691714-0.807261277699007	chr18	39490991	39492203	+	0	NA	intron (NM_175164, intron 20 of 22)	intron (NM_175164, intron 20 of 22)	155302	NM_008173	14815	Mm.129481	NM_008173	ENSMUSG00000024431	Nr3c1	GR|Grl-1|Grl1	nuclear receptor subfamily 3, group C, member 1	protein-coding
unique_peak1-3021-21-7-1.56948926526624-2.44150343356329	chr17	88625170	88626113	+	0	NA	Intergenic	RMER6C|LTR|ERVK	100789	NM_001190356	225058	Mm.312053	NM_001190356		Gm4832	EG225058	predicted gene 4832	protein-coding
common_peak2-24441-17-20--0.174021084573723-0.306598483909156	chr17	21679878	21680557	+	0	NA	intron (NM_144515, intron 2 of 4)	Lx3A|LINE|L1	7714	NM_144515	22710	Mm.296100	NM_144515		Zfp52	KRAB11|Zfp-52|Zfp76|mszf23-2|mszf24|mszf34|mszf75|zfec29	zinc finger protein 52	protein-coding
unique_peak1-5293-11-0-3.50869358425161-3.61235994796777	chr5	67532704	67533238	+	0	NA	Intergenic	PB1D10|SINE|Alu	-42606	NM_008888	18935	Mm.62505	NM_008888	ENSMUSG00000012520	Phox2b	Dilp1|NBPhox|Pmx2b	paired-like homeobox 2b	protein-coding
common_peak2-30534-37-30-0.571796761098944-1.03797455172871	chr7	67437178	67438540	+	0	NA	Intergenic	Intergenic	-152754	NM_001082962	20646	Mm.274995	NM_013670	ENSMUSG00000000948	Snrpn	2410045I01Rik|HCERN3|Peg4|Pwcr1|SMN	small nuclear ribonucleoprotein N	protein-coding
common_peak2-19805-6-13--1.2419568116773-1.58711810488664	chr1	88140024	88140666	+	0	NA	intron (NM_030184, intron 19 of 24)	RMER6A|LTR|ERVK	-59451	NM_145222	227327	Mm.86467	NM_145222	ENSMUSG00000079445	B3gnt7	C330001H22Rik|beta-3GnT7	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7	protein-coding
common_peak1-14672-26-24-0.284042902383738-0.446094173747083	chr3	60503423	60504709	+	0	NA	Intergenic	Intergenic	198892	NM_001253708	56758	Mm.255723	NM_020007	ENSMUSG00000027763	Mbnl1	Mbnl|mKIAA0428	muscleblind-like 1 (Drosophila)	protein-coding
unique_peak1-5629-12-5-1.06381348436648-1.78669045979184	chr6	14042918	14043555	+	0	NA	Intergenic	MLT1D|LTR|MaLR	221667	NR_045995	76311	Mm.367129	NR_045995	ENSMUSG00000097616	1110019D14Rik	-	RIKEN cDNA 1110019D14 gene	ncRNA
common_peak1-8369-8-6-0.197867495889966-1.03789460276074	chr10	59924325	59924789	+	0	NA	intron (NR_045556, intron 14 of 68)	intron (NR_045556, intron 14 of 68)	62083	NM_001164374	100302688	Mm.444135	NM_001164374	ENSMUSG00000090439	Gm17455	-	predicted gene, 17455	protein-coding
common_peak2-25978-18-21--0.146512467408946-0.306326795069975	chr19	53557399	53558072	+	0	NA	Intergenic	Intergenic	-18449	NR_028427	381232	Mm.248624	NR_028427	ENSMUSG00000097636	5830416P10Rik	4833407H14Rik|5430437C04Rik|ENSMUSG00000074788|Gm10758	RIKEN cDNA 5830416P10 gene	ncRNA
common_peak1-13611-30-13-1.36232048743427-2.74004546941311	chr2	21204888	21205795	+	0	NA	Intergenic	Intergenic	77990	NM_177588	208967	Mm.268841	NM_177588	ENSMUSG00000048550	Thnsl1	AW413632	threonine synthase-like 1 (bacterial)	protein-coding
common_peak1-9882-15-8-0.842239749113344-0.891319708951327	chr12	84614724	84615332	+	0	NA	intron (NM_001267625, intron 2 of 10)	intron (NM_001267625, intron 2 of 10)	213658	NM_001267626	70127	Mm.151308	NM_058212	ENSMUSG00000021221	Dpf3	2810403B03Rik|6530402L11Rik|BAF45C|C78788|CERD4|cer-d4	D4, zinc and double PHD fingers, family 3	protein-coding
common_peak1-18842-12-14--0.25811461052088-0.309074325783021	chr9	15357145	15357874	+	0	NA	Intergenic	Intergenic	47570	NM_133214	170748	Mm.86572	NM_133214	ENSMUSG00000058173	Smco4	Fn5	single-pass membrane protein with coiled-coil domains 4	protein-coding
common_peak1-7531-23-24-0.0779113147343562-0.318406410381916	chr1	34011410	34012299	+	0	NA	intron (NM_001276764, intron 2 of 102)	Lx9|LINE|L1	46784	NM_001276764	13518	Mm.336625	NM_010081	ENSMUSG00000026131	Dst	2310001O04Rik|A830042E19Rik|AW554249|BP230|BPAG1-n|Bpag|Bpag1|Macf2|ah|athetoid|dt|mKIAA0728|nmf203|nmf339	dystonin	protein-coding
common_peak1-18714-25-21-0.402418286707809-0.580176690544129	chr8	122775329	122776318	+	0	NA	Intergenic	Intergenic	-23693	NR_110496	434353	Mm.411793	NR_110496		A330074K22Rik	-	RIKEN cDNA A330074K22 gene	ncRNA
unique_peak1-4945-8-0-3.00522241794757-2.70926996097583	chr4	94432957	94433413	+	0	NA	intron (NM_001290551, intron 1 of 21)	intron (NM_001290551, intron 1 of 21)	27205	NM_001290551	21687	Mm.14313	NM_013690	ENSMUSG00000006386	Tek	AA517024|Cd202b|Hyk|STK1|Tie-2|Tie2	endothelial-specific receptor tyrosine kinase	protein-coding
common_peak2-24388-7-5-0.214128329577033-1.01466476204226	chr17	13187323	13187636	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-2074	NM_175394	60532	Mm.275521	NM_175394	ENSMUSG00000060475	Wtap	2810408K05Rik|9430038B09Rik	Wilms tumour 1-associating protein	protein-coding
common_peak1-14469-30-83--1.22264201328689-4.44388276880306	chr3	96239353	96240238	+	0	NA	intron (NM_001256180, intron 3 of 4)	intron (NM_001256180, intron 3 of 4)	16434	NM_001256181	329716	Mm.275223	NM_183223	ENSMUSG00000046317	BC107364	D730018G16	cDNA sequence BC107364	protein-coding
common_peak2-24233-50-63-0.0409403164789524-0.316181169053401	chr16	87698786	87700021	+	0	NA	intron (NM_007520, intron 1 of 4)	CpG	204	NM_007520	12013	Mm.26147	NM_007520	ENSMUSG00000025612	Bach1	6230421P05Rik|AI323795	BTB and CNC homology 1	protein-coding
common_peak2-22260-18-22--0.210642804828661-0.321718508207525	chr13	5803807	5804841	+	0	NA	Intergenic	Intergenic	53014	NR_045891	71867	Mm.179181	NR_045891		1700016G22Rik	-	RIKEN cDNA 1700016G22 gene	ncRNA
common_peak2-31657-14-17--0.270708841084668-0.328191099940267	chr8	126591040	126591675	+	0	NA	Intergenic	Intergenic	43984	NM_001029876	382038	Mm.334891	NM_001029876	ENSMUSG00000031976	Urb2	C77575|mKIAA0133	URB2 ribosome biogenesis 2 homolog (S. cerevisiae)	protein-coding
common_peak1-18364-25-23-0.27688740462395-0.451698068655807	chr8	70302177	70303213	+	0	NA	intron (NM_177698, intron 9 of 14)	L1Md_T|LINE|L1	39499	NM_027626	234353	Mm.32525	NM_027626	ENSMUSG00000030465	Psd3	4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D	pleckstrin and Sec7 domain containing 3	protein-coding
common_peak1-15182-12-10-0.189344366450341-0.386243247519795	chr3	152513029	152513654	+	0	NA	intron (NM_012028, intron 2 of 4)	ORR1E|LTR|MaLR	131830	NM_012028	26938	Mm.40915	NM_012028		St6galnac5	AI851940|Siat7e	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	protein-coding
unique_peak1-7169-17-1-3.21829633820504-4.59734841376773	chr9	60526077	60526931	+	0	NA	intron (NM_145616, intron 5 of 16)	intron (NM_145616, intron 5 of 16)	8837	NM_001146047	102747	Mm.269413	NM_145616	ENSMUSG00000047766	Lrrc49	AI430817|AW050057|D430025H09Rik|PGs4|p79	leucine rich repeat containing 49	protein-coding
common_peak2-31332-12-13--0.158578936969966-0.301029995663979	chr8	83602171	83602629	+	0	NA	Intergenic	L1Md_T|LINE|L1	-63595	NM_027554	74841	Mm.246018	NM_027554	ENSMUSG00000038250	Usp38	4631402N15Rik|4833420O05Rik|AA536967|AU044701|AW544820|mKIAA1891	ubiquitin specific peptidase 38	protein-coding
common_peak2-28036-18-19--0.00900894365901106-0.306598483909153	chr4	56864407	56865320	+	0	NA	intron (NM_018761, intron 1 of 18)	URR1A|DNA|MER1_type	13220	NM_018761	54366	Mm.218891	NM_018761	ENSMUSG00000038816	Ctnnal1	ACRP|AI616177|AW545119|C86009|Catnal1	catenin (cadherin associated protein), alpha-like 1	protein-coding
common_peak1-16064-31-51--0.475201047327968-0.786737236353019	chr5	50058247	50059259	+	0	NA	Intergenic	L1Md_T|LINE|L1	-381855	NM_001199244	80334	Mm.160172	NM_030265	ENSMUSG00000029088	Kcnip4	AV032399|Calp|Calp250|KChIP4|KChIP4a	Kv channel interacting protein 4	protein-coding
common_peak2-30006-11-15--0.491306415748387-0.435191258261915	chr6	124808747	124809651	+	0	NA	exon (NM_013533, exon 5 of 5)	exon (NM_013533, exon 5 of 5)	-1494	NM_013534	14789	Mm.35708	NM_013534	ENSMUSG00000023191	Leprel2	BC016431|Grcb|P3h3	leprecan-like 2	protein-coding
common_peak2-22571-13-16--0.30899081061257-0.330004445983672	chr13	64161814	64162664	+	0	NA	intron (NM_008291, intron 9 of 10)	A-rich|Low_complexity|Low_complexity	28270	NM_008291	15487	Mm.5109	NM_008291	ENSMUSG00000033122	Hsd17b3	-	hydroxysteroid (17-beta) dehydrogenase 3	protein-coding
common_peak1-13603-34-15-1.38206852700127-3.19271205772594	chr2	18821135	18822396	+	0	NA	intron (NM_008845, intron 3 of 9)	ORR1B1|LTR|MaLR	97983	NM_008845	18718	Mm.313977	NM_008845	ENSMUSG00000026737	Pip4k2a	AW742916|Pip5k2a	phosphatidylinositol-5-phosphate 4-kinase, type II, alpha	protein-coding
common_peak2-25017-59-85--0.10090075382952-0.333936129996735	chr18	23953855	23955335	+	0	NA	intron (NM_001162941, intron 2 of 7)	L2a|LINE|L2	-7876	NM_153058	212307	Mm.132237	NM_153058	ENSMUSG00000024277	Mapre2	AI314113|C820009F03Rik|D18Abb1e|EB1|EB2|RP1	microtubule-associated protein, RP/EB family, member 2	protein-coding
common_peak1-19416-30-44--0.322177686837802-0.475038482441584	chrX	74023204	74024069	+	0	NA	Intergenic	Lx|LINE|L1	-175373	NM_001201395	74987	Mm.107996	NM_001201395	ENSMUSG00000079525	4930468A15Rik	-	RIKEN cDNA 4930468A15 gene	protein-coding
unique_peak1-5932-20-8-1.31814978314888-1.77631109801764	chr6	89461082	89462116	+	0	NA	intron (NM_025351, intron 4 of 7)	B2_Mm2|SINE|B2	84047	NM_025351	66098	Mm.20313	NM_025351	ENSMUSG00000030086	Chchd6	0710001P09Rik|1700021B03Rik	coiled-coil-helix-coiled-coil-helix domain containing 6	protein-coding
unique_peak2-38658-4-12--1.72390023199434-1.85743853830261	chr7	97371460	97372064	+	0	NA	TTS (NM_183293)	TTS (NM_183293)	42180	NM_029256	75338	Mm.487222	NM_029256	ENSMUSG00000030617	Ccdc83	4930549K11Rik|4930554C01Rik|4932423M01Rik	coiled-coil domain containing 83	protein-coding
unique_peak1-6224-19-5-1.81772482594053-2.59995804677862	chr7	4082668	4083566	+	0	NA	intron (NM_001001454, intron 10 of 12)	C-rich|Low_complexity|Low_complexity	5411	NR_033548	100037396	Mm.447887	NR_033548	ENSMUSG00000085886	D030047H15Rik	Gm15924|OTTMUSG00000027889	RIKEN cDNA D030047H15 gene	ncRNA
unique_peak2-32653-4-10--1.48289213249054-1.5150158574804	chr1	133229060	133229538	+	0	NA	intron (NM_001081011, intron 12 of 22)	intron (NM_001081011, intron 12 of 22)	-53159	NM_019777	56489	Mm.386783	NM_019777	ENSMUSG00000042349	Ikbke	AW558201|IKK-i|IKKepsilon|Ikki	inhibitor of kappaB kinase epsilon	protein-coding
common_peak2-23917-74-69-0.586603560033641-1.93014370323847	chr16	8737674	8739273	+	0	NA	promoter-TSS (NM_001003918)	promoter-TSS (NM_001003918)	-38	NM_001003918	252870	Mm.295330	NM_001003918	ENSMUSG00000022710	Usp7	2210010O09Rik|AA409944|AA617399|AU019296|AW548146|C80752|Hausp	ubiquitin specific peptidase 7	protein-coding
unique_peak2-36531-4-6--0.830815435910851-0.989110657569874	chr2	163659051	163659407	+	0	NA	TTS (NM_016873)	TTS (NM_016873)	12659	NM_016873	22403	Mm.13828	NM_016873	ENSMUSG00000027656	Wisp2	Ccn5|Crgr4|Ctgfl|Rcop1	WNT1 inducible signaling pathway protein 2	protein-coding
unique_peak1-568-8-1-2.00522241794757-2.05605744720049	chr10	56950578	56951082	+	0	NA	Intergenic	Intergenic	255329	NR_045353	74928	Mm.416643	NR_045353	ENSMUSG00000097370	4930467K11Rik	-	RIKEN cDNA 4930467K11 gene	ncRNA
unique_peak2-39592-6-6--0.241956811677302-0.947717972411649	chr9	77481381	77481730	+	0	NA	Intergenic	Intergenic	-2984	NM_172925	244923	Mm.138238	NM_172925	ENSMUSG00000044938	Klhl31	9830147P19Rik|D930047P17Rik|Kbtbd1	kelch-like 31	protein-coding
unique_peak2-35822-4-8--1.19338551529556-1.21878474469819	chr18	64940063	64940401	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-107178	NM_001114386	83814	Mm.98668	NM_031881	ENSMUSG00000024589	Nedd4l	1300012C07Rik|Nedd4-2|Nedd4b	neural precursor cell expressed, developmentally down-regulated gene 4-like	protein-coding
common_peak1-9693-12-17--0.521149016354673-0.417187467413082	chr12	17729022	17729559	+	0	NA	intron (NM_016677, intron 1 of 3)	MTC|LTR|MaLR	31670	NM_016677	53602	Mm.313619	NM_016677	ENSMUSG00000071379	Hpcal1	NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3	hippocalcin-like 1	protein-coding
unique_peak1-6721-12-4-1.32684789020028-2.04196296489515	chr8	41036355	41037099	+	0	NA	Intergenic	Intergenic	-308695	NM_001113326	20288	Mm.239291	NM_031195	ENSMUSG00000025044	Msr1	MRS-A|MSR|MSR-A|SR-AI|SR-AII|Scara1|Scvr	macrophage scavenger receptor 1	protein-coding
unique_peak1-6934-6-5--0.0195643903408542-0.947717972411649	chr8	107457820	107458324	+	0	NA	3' UTR (NM_172759, exon 12 of 12)	3' UTR (NM_172759, exon 12 of 12)	7912	NM_172759	234673	Mm.441134	NM_172759	ENSMUSG00000031886	Ces2e	9030624L02Rik|Ces5	carboxylesterase 2E	protein-coding
common_peak2-27277-26-36--0.281554273470488-0.419637632935626	chr3	57410647	57411718	+	0	NA	Intergenic	Lx6|LINE|L1	-31350	NM_001168281	97064	Mm.405029	NM_133784	ENSMUSG00000027803	Wwtr1	2310058J06Rik|2610021I22Rik|C78399|Taz	WW domain containing transcription regulator 1	protein-coding
unique_peak2-33010-4-8--1.19338551529556-1.21878474469819	chr10	63177213	63177720	+	0	NA	intron (NM_001164376, intron 5 of 17)	L1Md_F2|LINE|L1	-106337	NM_001164519	216033	Mm.444692	NM_177612	ENSMUSG00000060843	Ctnna3	4930429L08Rik|4933408A16|Catna3|Vr22	catenin (cadherin associated protein), alpha 3	protein-coding
common_peak1-16132-18-25--0.38752056691274-0.421916810733234	chr5	72558789	72559598	+	0	NA	intron (NM_178599, intron 1 of 4)	CpG	229	NM_178599	27784	Mm.44223	NM_178599	ENSMUSG00000029213	Commd8	C77770|D5Buc26e	COMM domain containing 8	protein-coding
common_peak1-16117-48-45-0.447365195177801-0.955521670249481	chr5	66080880	66082871	+	0	NA	intron (NM_001081321, intron 2 of 31)	B3|SINE|B2	7220	NM_001081321	71521	Mm.278974	NM_027818	ENSMUSG00000029202	Pds5a	9030416H16Rik|E230024D05Rik|mKIAA0648	PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	protein-coding
unique_peak2-34649-2-6--1.72480917832092-1.26211192963361	chr14	118137135	118137543	+	0	NA	intron (NM_011821, intron 4 of 8)	(GA)n|Simple_repeat|Simple_repeat	215730	NR_105747	102465148		NR_105747	miRBase:MI0021586	Mir6239	mmu-mir-6239	microRNA mir-6239	ncRNA
common_peak2-30961-35-106--1.31009672793864-6.27131066415621	chr8	94666601	94667556	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	212941	NR_110452	71296	Mm.86664	NR_033641	ENSMUSG00000031736	Crnde	4933436C20Rik	colorectal neoplasia differentially expressed (non-protein coding)	ncRNA
common_peak2-20909-9-11--0.395349094316936-0.344532117358383	chr11	4895238	4895739	+	0	NA	intron (NM_007454, intron 1 of 20)	L2a|LINE|L2	8661	NM_007454	11764	Mm.274816	NM_007454	ENSMUSG00000009090	Ap1b1	Adtb1|b2b1660Clo	adaptor protein complex AP-1, beta 1 subunit	protein-coding
unique_peak2-39302-5-7--0.704380336005853-1.01466476204226	chr8	123719052	123719613	+	0	NA	Intergenic	Intergenic	67747	NM_008024	14241	Mm.5111	NM_008024	ENSMUSG00000097084	Foxl1	FREAC7|Fkh6|fkh-6	forkhead box L1	protein-coding
unique_peak2-39756-12-23--0.936186515633517-0.912223620338476	chrX	75382074	75382860	+	0	NA	Intergenic	L1_Mur3|LINE|L1	11661	NM_001085534	546335	Mm.476683	NM_001085534	ENSMUSG00000079521	Gm5938	EG546335	predicted gene 5938	protein-coding
common_peak2-30073-14-10-0.439784541720347-0.519648556297791	chr6	131382238	131382920	+	0	NA	Intergenic	Intergenic	-44111	NM_011733	56449	Mm.458000	NM_011733	ENSMUSG00000030189	Ybx3	Csda|Dpba|MSY3|MSY4|Yb2|dbpA|oxyR	Y box protein 3	protein-coding
common_peak2-22852-27-28-0.133564955767664-0.358978896303361	chr14	25473976	25475150	+	0	NA	Intergenic	Intergenic	164660	NM_011297	20088	Mm.16775	NM_011297	ENSMUSG00000025290	Rps24	-	ribosomal protein S24	protein-coding
common_peak1-18527-11-10-0.0492619656143161-0.31137425193576	chr8	94036557	94037122	+	0	NA	intron (NM_011936, intron 7 of 8)	intron (NM_011936, intron 7 of 8)	199415	NM_011936	26383	Mm.4375	NM_011936	ENSMUSG00000055932	Fto	AW743446|mKIAA1752	fat mass and obesity associated	protein-coding
unique_peak2-36267-8-18--1.24270509549601-1.15812782348128	chr2	59636421	59637321	+	0	NA	intron (NM_001290659, intron 12 of 25)	B3|SINE|B2	83792	NM_001159636	72137	Mm.288734	NM_028118	ENSMUSG00000026988	Wdsub1	1700048E19Rik|2610014F08Rik	WD repeat, SAM and U-box domain containing 1	protein-coding
unique_peak1-6973-24-8-1.6232849013254-2.85636458546265	chr8	119431971	119433054	+	0	NA	intron (NM_026844, intron 2 of 3)	intron (NM_026844, intron 2 of 3)	12824	NM_026844	66531	Mm.4011	NM_026844	ENSMUSG00000014633	Cmc2	1110046L09Rik|2310061C15Rik|DC13	COX assembly mitochondrial protein 2	protein-coding
common_peak2-26658-24-38--0.492192316094532-0.631311512744354	chr2	121139405	121140666	+	0	NA	intron (NM_178795, intron 29 of 29)	intron (NM_178795, intron 29 of 29)	18845	NM_001173506	17754	Mm.36501	NM_032393	ENSMUSG00000027254	Map1a	6330416M19Rik|AI853608|Mtap-1|Mtap1|Mtap1a|moth1	microtubule-associated protein 1 A	protein-coding
common_peak1-14039-6-9--0.75652998450706-1.11707584880836	chr2	118479143	118479558	+	0	NA	Intergenic	RMER19B|LTR|ERVK	-9963	NM_001033254	214230	Mm.241857	NM_001033254	ENSMUSG00000074923	Pak6	4732456M09	p21 protein (Cdc42/Rac)-activated kinase 6	protein-coding
common_peak1-17618-15-15-0.0121647505556561-0.30803596071496	chr7	45559259	45559951	+	0	NA	Intergenic	Intergenic	960299	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak1-9543-44-27-1.01453791251093-2.67977800786504	chr11	116273527	116275236	+	0	NA	promoter-TSS (NM_027258)	promoter-TSS (NM_027258)	-35	NM_027258	217340	Mm.426344	NM_027258	ENSMUSG00000052949	Rnf157	2610036E23Rik|A130073L17Rik|mKIAA1917	ring finger protein 157	protein-coding
common_peak2-28844-18-26--0.441968350935117-0.471456499375593	chr5	72558855	72559740	+	0	NA	intron (NM_178599, intron 1 of 4)	CpG	125	NM_178599	27784	Mm.44223	NM_178599	ENSMUSG00000029213	Commd8	C77770|D5Buc26e	COMM domain containing 8	protein-coding
common_peak1-18280-33-24-0.687481372750804-1.17890083738705	chr8	41013959	41015265	+	0	NA	Intergenic	Intergenic	-286580	NM_001113326	20288	Mm.239291	NM_031195	ENSMUSG00000025044	Msr1	MRS-A|MSR|MSR-A|SR-AI|SR-AII|Scara1|Scvr	macrophage scavenger receptor 1	protein-coding
common_peak1-17249-32-18-1.03116450577607-2.02129774107186	chr6	129231212	129232595	+	0	NA	Intergenic	RLTR19|LTR|ERVK	-6516	NM_001033122	12515	Mm.74745	NM_001033122	ENSMUSG00000030156	Cd69	5830438K24Rik|AI452015|AIM|VEA	CD69 antigen	protein-coding
unique_peak2-35212-1-6--2.43441193227435-1.56314192529759	chr16	88762678	88762987	+	0	NA	Intergenic	Intergenic	3740	NM_054100	117172	Mm.160339	NM_054100		2310034C09Rik	-	RIKEN cDNA 2310034C09 gene	protein-coding
common_peak1-19279-45-52-0.132437570781673-0.372131646957063	chr9	119001401	119002926	+	0	NA	intron (NR_121571, intron 1 of 14)	intron (NR_121571, intron 1 of 14)	457	NR_121571	18799	Mm.23963	NM_019676	ENSMUSG00000010660	Plcd1	AW212592|C79986	phospholipase C, delta 1	protein-coding
common_peak1-11755-42-32-0.69793520850873-1.53680515249685	chr16	37684122	37685866	+	0	NA	Intergenic	Intergenic	-30540	NM_026610	68194	Mm.379154	NM_026610		Ndufb4	0610006N12Rik|1300010H20Rik	NADH dehydrogenase (ubiquinone) 1 beta subcomplex 4	protein-coding
unique_peak2-37896-2-12--2.61789397440441-2.55640854263862	chr5	140832787	140833206	+	0	NA	intron (NM_172277, intron 3 of 10)	intron (NM_172277, intron 3 of 10)	25120	NM_008637	17766	Mm.118846	NM_008637	ENSMUSG00000036639	Nudt1	Mth1	nudix (nucleoside diphosphate linked moiety X)-type motif 1	protein-coding
common_peak1-13596-88-117-0.132769359808691-0.428191034476223	chr2	18056668	18058627	+	0	NA	intron (NR_045538, intron 8 of 22)	B4|SINE|B4	71435	NM_001252561	17354	Mm.209175	NM_010804	ENSMUSG00000026743	Mllt10	Af10|B130021D15Rik|D630001B22Rik|mKIAA4140	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	protein-coding
common_peak1-9593-9-4-0.867685311516858-1.36011389749466	chr11	119390521	119391004	+	0	NA	Intergenic	L1MB2|LINE|L1	18372	NM_008730	18164	Mm.5142	NM_008730	ENSMUSG00000025582	Nptx1	D11Bwg1004e|Np1	neuronal pentraxin 1	protein-coding
common_peak1-8569-13-5-1.19350952991661-1.95509489018123	chr10	95863928	95864521	+	0	NA	Intergenic	Intergenic	175383	NR_110448	74881	Mm.410819	NR_110448		4930459C07Rik	-	RIKEN cDNA 4930459C07 gene	ncRNA
common_peak2-31633-21-14-0.662598669657717-0.879255460030357	chr8	123684340	123685030	+	0	NA	Intergenic	Intergenic	33100	NM_008024	14241	Mm.5111	NM_008024	ENSMUSG00000097084	Foxl1	FREAC7|Fkh6|fkh-6	forkhead box L1	protein-coding
common_peak2-24758-13-40--1.57907997398032-3.13557888369248	chr17	56036045	56036788	+	0	NA	intron (NM_145490, intron 3 of 3)	MurSatRep1|Unknown|Unknown	4900	NM_145490	224893	Mm.294853	NM_145490		Zfp959	-	zinc finger protein 959	protein-coding
unique_peak1-5938-13-10-0.319040412000471-0.446472590016315	chr6	90695871	90696462	+	0	NA	intron (NM_001134384, intron 1 of 13)	MLT1A1|LTR|MaLR	-29643	NM_001134383	232227	Mm.196943	NM_182784	ENSMUSG00000034312	Iqsec1	AW561907|BC026481|BRAG2|D6Ertd349e|cI-43	IQ motif and Sec7 domain 1	protein-coding
unique_peak2-39797-1-6--2.43441193227435-1.56314192529759	chrX	17208514	17208859	+	0	NA	Intergenic	Intergenic	-59263	NM_028058	72018	Mm.41558	NM_028058	ENSMUSG00000025040	Fundc1	1500005J14Rik|1810033P05Rik	FUN14 domain containing 1	protein-coding
unique_peak1-5085-11-0-3.50869358425161-3.61235994796777	chr4	144973069	144973792	+	0	NA	Intergenic	Intergenic	-68380	NM_009401	21941	Mm.12810	NM_009401	ENSMUSG00000028602	Tnfrsf8	Cd30|D1S166E|Ki|Ki-1	tumor necrosis factor receptor superfamily, member 8	protein-coding
common_peak1-11800-29-29-0.205399485006592-0.423354874519384	chr16	57121510	57122515	+	0	NA	exon (NM_138599, exon 1 of 12)	exon (NM_138599, exon 1 of 12)	185	NM_138599	28185	Mm.213292	NM_138599	ENSMUSG00000022752	Tomm70a	2610044B22Rik|D16Ium22|D16Ium22e|D16Wsu109e|Tom70|mKIAA0719	translocase of outer mitochondrial membrane 70 homolog A (yeast)	protein-coding
unique_peak1-2930-8-1-2.00522241794757-2.05605744720049	chr17	54185785	54186276	+	0	NA	Intergenic	L1Md_T|LINE|L1	-56074	NM_018751	20888	Mm.10108	NM_018751	ENSMUSG00000023943	Sult1c1	(PST)G|P-SULT|ST1C1|Stp2|Sult1a2|mOLFST	sulfotransferase family, cytosolic, 1C, member 1	protein-coding
common_peak2-26822-27-21-0.532114332257938-0.800403172662453	chr2	152332087	152332747	+	0	NA	Intergenic	B4|SINE|B4	5055	NM_001039120	654457	Mm.389363	NM_001039120	ENSMUSG00000074680	Defb26	EG654457	defensin beta 26	protein-coding
common_peak2-29007-30-31-0.169675409491873-0.382130460680153	chr5	110176562	110177200	+	0	NA	Intergenic	Intergenic	86280	NR_027964	667213	Mm.454429	NR_027964		Gm10416	EG667213|ENSMUSG00000072761	zinc finger protein pseudogene	pseudo
unique_peak1-966-9-0-3.18961340640422-3.01029995663981	chr11	61590664	61591196	+	0	NA	3' UTR (NM_013881, exon 27 of 27)	3' UTR (NM_013881, exon 27 of 27)	-15340	NM_001164243	212627	Mm.27703	NM_144806	ENSMUSG00000020528	Prpsap2	A230054F23Rik	phosphoribosyl pyrophosphate synthetase-associated protein 2	protein-coding
common_peak1-8184-18-14-0.406028555619833-0.532159081577619	chr10	80052211	80052788	+	0	NA	intron (NM_145421, intron 1 of 4)	intron (NM_145421, intron 1 of 4)	587	NM_145421	216169	Mm.29802	NM_145421	ENSMUSG00000003346	Abhd17a	1700013O15Rik|BC005632|D10Bwg1364e|Fam108a	abhydrolase domain containing 17A	protein-coding
common_peak2-22938-49-62-0.0290038995252671-0.307923848373175	chr14	47373454	47375091	+	0	NA	Intergenic	RLTRETN_Mm|LTR|ERVK	-5944	NM_028222	72391	Mm.272394	NM_028222	ENSMUSG00000037628	Cdkn3	2410006H10Rik|KAP	cyclin-dependent kinase inhibitor 3	protein-coding
common_peak2-28594-30-98--1.45968121058774-6.77405187924008	chr5	21054601	21056027	+	0	NA	intron (NM_177076, intron 11 of 19)	intron (NM_177076, intron 11 of 19)	5969	NM_028977	74511	Mm.439963	NM_028977	ENSMUSG00000039883	Lrrc17	37kDa|4833425M04Rik|6130400C22Rik|P37nb	leucine rich repeat containing 17	protein-coding
unique_peak2-36887-4-6--0.830815435910851-0.989110657569874	chr3	95653570	95653943	+	0	NA	intron (NM_027541, intron 3 of 15)	intron (NM_027541, intron 3 of 15)	5920	NM_027541	70767	Mm.279872	NM_027541	ENSMUSG00000015748	Prpf3	3632413F13Rik	PRP3 pre-mRNA processing factor 3 homolog (yeast)	protein-coding
common_peak2-22909-25-63--1.13815009465489-3.09530603560454	chr14	37134605	37135325	+	0	NA	Intergenic	Lx8|LINE|L1	226814	NM_175008	218921	Mm.212464	NM_175008	ENSMUSG00000096405	4930474N05Rik	-	RIKEN cDNA 4930474N05 gene	protein-coding
common_peak2-27925-16-42--1.30800111243404-2.67563291309485	chr4	12089205	12090075	+	0	NA	intron (NM_026558, intron 5 of 7)	Lx5|LINE|L1	9522	NM_026558	68099	Mm.25340	NM_026558	ENSMUSG00000028218	Fam92a	6720467C03Rik|Fam92a1	family with sequence similarity 92, member A	protein-coding
common_peak1-11548-72-65-0.624189693513864-2.09597429140358	chr16	8737911	8739255	+	0	NA	promoter-TSS (NM_001003918)	promoter-TSS (NM_001003918)	-148	NM_001003918	252870	Mm.295330	NM_001003918	ENSMUSG00000022710	Usp7	2210010O09Rik|AA409944|AA617399|AU019296|AW548146|C80752|Hausp	ubiquitin specific peptidase 7	protein-coding
unique_peak2-37329-3-5--0.998945590680433-0.96108193396963	chr4	130173337	130173701	+	0	NA	Intergenic	Intergenic	-45755	NM_030722	80912	Mm.440206	NM_030722	ENSMUSG00000028580	Pum1	AA517475|Pumm|mKIAA0099	pumilio RNA-binding family member 1	protein-coding
unique_peak2-32706-5-4--0.0263084308932156-0.909929411522249	chr1	153093357	153093780	+	0	NA	Intergenic	Intergenic	-98060	NM_001039512	117198	Mm.33764	NM_028582	ENSMUSG00000023150	Ivns1abp	1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850	influenza virus NS1A binding protein	protein-coding
common_peak2-31582-16-18--0.129663871175524-0.307235046933848	chr8	120407624	120408586	+	0	NA	Intergenic	LTR16E1|LTR|ERVL	-82276	NM_026758	68533	Mm.181836	NM_026758	ENSMUSG00000031843	Mphosph6	1110001M01Rik|AA536809|C86426	M phase phosphoprotein 6	protein-coding
common_peak1-19315-15-23--0.5727977501655-0.575340103425218	chr9	123112527	123113280	+	0	NA	intron (NM_133974, intron 1 of 8)	intron (NM_133974, intron 1 of 8)	12253	NM_133974	109332	Mm.27519	NM_133974	ENSMUSG00000035498	Cdcp1	9030022E12Rik|AA409659|E030027H19Rik	CUB domain containing protein 1	protein-coding
common_peak2-27513-70-123--0.334229394011476-0.916450677904792	chr3	95314716	95316133	+	0	NA	Intergenic	Intergenic	12292	NM_007802	13038	Mm.272085	NM_007802	ENSMUSG00000028111	Ctsk	AI323530|MMS10-Q|Ms10q|catK	cathepsin K	protein-coding
unique_peak2-35875-2-10--2.37688587490062-2.09384600808989	chr18	80656536	80656981	+	0	NA	intron (NM_026295, intron 1 of 12)	intron (NM_026295, intron 1 of 12)	9648	NM_026295	67655	Mm.312893	NM_026295	ENSMUSG00000033323	Ctdp1	4930563P03Rik|AW553592	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1	protein-coding
unique_peak1-1652-8-1-2.00522241794757-2.05605744720049	chr13	59700336	59700851	+	0	NA	intron (NM_030153, intron 4 of 22)	B1_Mus2|SINE|Alu	13899	NM_030153	78689	Mm.253902	NM_030153	ENSMUSG00000021555	Naa35	A330021G12Rik|A330027C19Rik|AI158944|C030004C14Rik|Mak10	N(alpha)-acetyltransferase 35, NatC auxiliary subunit	protein-coding
common_peak2-23013-11-30--1.44550272613526-2.2880788707084	chr14	62761489	62762254	+	0	NA	Intergenic	Intergenic	149945	NM_173419	239133	Mm.127330	NM_173419	ENSMUSG00000048281	Dleu7	BC038059	deleted in lymphocytic leukemia, 7	protein-coding
unique_peak1-4357-44-3-3.82189283456854-13.1899852499752	chr2	155894350	155895828	+	0	NA	exon (NM_139151, exon 12 of 12)	exon (NM_139151, exon 12 of 12)	4140	NM_139151	245865	Mm.330713	NM_139151	ENSMUSG00000038180	Spag4	1700041K21Rik|MNCb-0953|Sun4|mKIAA4118	sperm associated antigen 4	protein-coding
common_peak2-30612-6-7--0.434601889619698-0.97990265578305	chr7	89738770	89739054	+	0	NA	intron (NM_001190374, intron 23 of 29)	intron (NM_001190374, intron 23 of 29)	58126	NM_177894	330577	Mm.222812	NM_177894	ENSMUSG00000038570	Fam154b	1700129I04Rik|D030069K18	family with sequence similarity 154, member B	protein-coding
unique_peak2-38780-1-7--2.62705701021674-1.80617997398389	chr7	127850349	127850751	+	0	NA	intron (NM_001164580, intron 1 of 2)	intron (NM_001164580, intron 1 of 2)	29416	NM_001164580	233812	Mm.276479	NM_001164580	ENSMUSG00000046096	BC030336	-	cDNA sequence BC030336	protein-coding
common_peak2-27317-47-35-0.764916423324236-1.84937269552405	chr3	65665800	65666774	+	0	NA	Intergenic	Intergenic	95860	NM_019937	56706	Mm.175612	NM_019937	ENSMUSG00000027829	Ccnl1	2610030E23Rik|AU018493|Ccnl|ania-6a	cyclin L1	protein-coding
common_peak2-26725-23-28--0.136213490618491-0.317118655902079	chr2	131179497	131180180	+	0	NA	Intergenic	Intergenic	-1210	NM_178607	51902	Mm.477523	NM_178607	ENSMUSG00000048911	Rnf24	2810473M14Rik|4930505A13Rik|AI317164|C86507|D2Ertd504e	ring finger protein 24	protein-coding
common_peak1-12339-14-11-0.314253659636488-0.435191258261915	chr17	55931846	55932588	+	0	NA	intron (NM_139138, intron 7 of 16)	L1Md_F2|LINE|L1	42968	NM_139138	52614	Mm.210497	NM_139138	ENSMUSG00000032915	Emr4	D17Ertd479e|Egf-tm7|Fire|Gpr127	EGF-like module containing, mucin-like, hormone receptor-like sequence 4	protein-coding
common_peak2-21599-19-9-1.08075923177432-1.37307999835977	chr11	99107453	99108111	+	0	NA	Intergenic	Charlie5|DNA|MER1_type	-2401	NM_172946	268481	Mm.133193	NM_172946	ENSMUSG00000035849	Krt222	6330509G02Rik	keratin 222	protein-coding
common_peak2-21406-23-29--0.185123091099438-0.336580821310529	chr11	83298372	83299463	+	0	NA	intron (NM_027427, intron 5 of 15)	B3|SINE|B2	12307	NM_027427	70439	Mm.181050	NM_027427	ENSMUSG00000020680	Taf15	2610111C21Rik|68kDa|TAFII68|Taf2n	TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor	protein-coding
unique_peak1-7007-7-2-1.21412832957703-1.45399745587252	chr8	122949510	122950028	+	0	NA	Intergenic	Intergenic	-62997	NM_198671	382034	Mm.334856	NM_198671	ENSMUSG00000031822	Gse1	2210013I18Rik|mKIAA0182	genetic suppressor element 1	protein-coding
unique_peak1-1563-9-4-0.867685311516858-1.36011389749466	chr13	29549725	29550195	+	0	NA	intron (NM_144536, intron 12 of 15)	L1M3|LINE|L1	397497	NM_144536	68916	Mm.212227	NM_144536	ENSMUSG00000006191	Cdkal1	1190005B03Rik|6620401C13Rik	CDK5 regulatory subunit associated protein 1-like 1	protein-coding
unique_peak1-5955-13-5-1.19350952991661-1.95509489018123	chr6	91713096	91713785	+	0	NA	3' UTR (NM_001159507, exon 24 of 24)	3' UTR (NM_001159507, exon 24 of 24)	43947	NM_001159507	243547	Mm.333264	NM_001033353	ENSMUSG00000030098	Grip2	-	glutamate receptor interacting protein 2	protein-coding
unique_peak2-37307-5-6--0.511735258063458-0.947717972411649	chr4	123905004	123905397	+	0	NA	Intergenic	Intergenic	258002	NR_040774	78460	Mm.452060	NR_040774		1700057H15Rik	-	RIKEN cDNA 1700057H15 gene	ncRNA
common_peak1-11725-22-17-0.477359103645092-0.633951497070961	chr16	32877522	32878448	+	0	NA	exon (NM_001159349, exon 1 of 8)	exon (NM_001159349, exon 1 of 8)	115	NM_001159349	69823	Mm.12831	NM_027226	ENSMUSG00000022800	Fyttd1	2010005M05Rik|3830411L18Rik|3830421F13Rik|4933423A17Rik|AI098218|AW539567|C85190	forty-two-three domain containing 1	protein-coding
unique_peak2-39852-7-14--1.10779976531033-0.817533494790411	chrX	70476609	70477205	+	0	NA	TTS (NM_007978)	TTS (NM_007978)	3262	NM_007978	14070	Mm.165807	NM_007978	ENSMUSG00000078317	F8a	AI852759|DXUcsf1|F8a1	factor 8-associated gene A	protein-coding
unique_peak2-39219-9-31--1.81038659359578-3.08022526292111	chr8	108711774	108713050	+	0	NA	intron (NM_178798, intron 2 of 9)	intron (NM_178798, intron 2 of 9)	19637	NM_178798	330836	Mm.46749	NM_178798	ENSMUSG00000031904	Slc7a6	AI643885|LAT-2|LAT3	solute carrier family 7 (cationic amino acid transporter, y+ system), member 6	protein-coding
unique_peak1-1357-9-3-1.18961340640422-1.57096726280955	chr12	24593184	24593604	+	0	NA	Intergenic	RLTR45-int|LTR|ERVK	188740	NM_001256489	66808	Mm.379124	NM_001256489		9030624G23Rik	-	RIKEN cDNA 9030624G23 gene	protein-coding
unique_peak1-1362-6-0-2.5653981103803-2.10720996964787	chr12	31071958	31072302	+	0	NA	Intergenic	Intergenic	-13890	NM_172951	268534	Mm.279765	NM_172951	ENSMUSG00000020672	Sntg2	2210008K22Rik|9530013L23|BB121248	syntrophin, gamma 2	protein-coding
common_peak1-18203-12-14--0.25811461052088-0.309074325783021	chr8	23037314	23037918	+	0	NA	Intergenic	L1_Mur2|LINE|L1	5566	NM_139222	246082	Mm.390015	NM_139222	ENSMUSG00000048500	Defb15	BD-15	defensin beta 15	protein-coding
unique_peak1-819-11-5-0.923731083530457-1.477227296591	chr11	5736646	5737157	+	0	NA	intron (NM_017401, intron 1 of 10)	intron (NM_017401, intron 1 of 10)	1118	NM_017401	54125	Mm.260194	NM_017401	ENSMUSG00000020474	Polm	AI462166|B230309I03Rik|Tdt-N	polymerase (DNA directed), mu	protein-coding
unique_peak1-594-13-4-1.45654393575041-2.23384849113406	chr10	17011609	17012181	+	0	NA	Intergenic	Intergenic	-196307	NR_038020	100504235	Mm.84044	NR_038020		Gm20125	-	predicted gene, 20125	ncRNA
unique_peak1-5914-8-0-3.00522241794757-2.70926996097583	chr6	88917239	88917714	+	0	NA	Intergenic	Intergenic	65231	NM_011906	24100	Mm.284480	NM_011906	ENSMUSG00000002871	Tpra1	40kDa|Gpr175|Tpra40	transmembrane protein, adipocyte asscociated 1	protein-coding
unique_peak1-250-11-2-1.92373108353046-2.32232533660526	chr1	91448919	91449504	+	0	NA	intron (NM_001037136, intron 1 of 16)	intron (NM_001037136, intron 1 of 16)	97825	NM_001037136	347722	Mm.291135	NM_178119	ENSMUSG00000055013	Agap1	Centg2|Ggap1|R75364|mKIAA1099	ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	protein-coding
common_peak1-12491-11-7-0.508693584251613-1.21681515183528	chr17	87170721	87171267	+	0	NA	intron (NM_010137, intron 1 of 15)	intron (NM_010137, intron 1 of 15)	17790	NM_010137	13819	Mm.1415	NM_010137	ENSMUSG00000024140	Epas1	HIF-2alpha|HIF2A|HLF|HRF|MOP2|bHLHe73	endothelial PAS domain protein 1	protein-coding
unique_peak1-895-10-2-1.77145284428761-2.09384600808989	chr11	35944210	35944727	+	0	NA	intron (NM_011856, intron 12 of 28)	intron (NM_011856, intron 12 of 28)	-150877	NM_170779	211652	Mm.31267	NM_170779		Wwc1	AA408228|AU017197|BC037006|Kibra|mKIAA0869	WW, C2 and coiled-coil domain containing 1	protein-coding
unique_peak1-3552-11-2-1.92373108353046-2.32232533660526	chr19	24486600	24487108	+	0	NA	intron (NM_008846, intron 3 of 14)	intron (NM_008846, intron 3 of 14)	65110	NM_026520	68034	Mm.440181	NM_026520		Fam122a	2410124L17Rik|2900009I07Rik|ENSMUSG00000051082|Gm9849	family with sequence similarity 122, member A	protein-coding
common_peak1-17800-13-9-0.456543935750406-0.53895475198017	chr7	99858252	99858737	+	0	NA	Intergenic	Intergenic	31475	NR_015510	666737	Mm.473620	NR_015510	ENSMUSG00000074024	4632427E13Rik	AU015482	RIKEN cDNA 4632427E13 gene	ncRNA
common_peak1-10855-68-101--0.102464562673199-0.340920414422423	chr14	121378196	121380279	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-55559	NM_134082	223254	Mm.223980	NM_134082	ENSMUSG00000025555	Farp1	AW228844|BC030329|Cdep	FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived)	protein-coding
common_peak1-17070-36-25-0.778881368026663-1.55933022783608	chr6	108184852	108186010	+	0	NA	intron (NM_010585, intron 2 of 61)	intron (NM_010585, intron 2 of 61)	22341	NM_010585	16438	Mm.227912	NM_010585	ENSMUSG00000030102	Itpr1	D6Pas2|ENSMUSG00000072853|Gm10429|IP3R1|InsP3R|Ip3r|Itpr-1|P400|Pcp-1|Pcp1|opt	inositol 1,4,5-trisphosphate receptor 1	protein-coding
unique_peak1-3560-8-0-3.00522241794757-2.70926996097583	chr19	26441074	26441613	+	0	NA	Intergenic	Intergenic	-238307	NM_011416	67155	Mm.491146	NM_011416	ENSMUSG00000024921	Smarca2	2610209L14Rik|SNF2alpha|Snf2l2|brahma|brm	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	protein-coding
unique_peak2-32916-8-7-0.00522241794757061-1.00793137938329	chr10	24458564	24459192	+	0	NA	Intergenic	Intergenic	-26970	NM_008813	18605	Mm.27254	NM_008813	ENSMUSG00000037370	Enpp1	4833416E15Rik|AI428932|C76301|CD203c|E-NPP1|Ly-41|M6S1|NPP1|Npps|PC-1|Pca|Pca-1|Pdnp1|ttw|twy	ectonucleotide pyrophosphatase/phosphodiesterase 1	protein-coding
unique_peak2-35475-11-24--1.13516260552311-1.3750876294627	chr17	44500707	44501725	+	0	NA	Intergenic	ORR1E|LTR|MaLR	175695	NM_172621	224796	Mm.37666	NM_172621	ENSMUSG00000023959	Clic5	5730531E12Rik|B330005L24|Gm322|jbg	chloride intracellular channel 5	protein-coding
common_peak1-9826-10-7-0.356415345008769-1.12966497611638	chr12	72084411	72085013	+	0	NA	intron (NM_011184, intron 3 of 10)	intron (NM_011184, intron 3 of 10)	9102	NM_011184	19167	Mm.296338	NM_011184		Psma3	Lmpc8	proteasome (prosome, macropain) subunit, alpha type 3	protein-coding
common_peak1-11287-17-15-0.218296338205038-0.403453972741633	chr15	83337929	83338774	+	0	NA	intron (NM_178869, intron 1 of 11)	intron (NM_178869, intron 1 of 11)	2986	NM_178869	319953	Mm.235007	NM_178869	ENSMUSG00000022442	Ttll1	6330444E16Rik|AV014541	tubulin tyrosine ligase-like 1	protein-coding
unique_peak2-39662-7-17--1.37083417114412-1.23399803405144	chr9	107534052	107534693	+	0	NA	intron (NM_008138, intron 1 of 8)	intron (NM_008138, intron 1 of 8)	3301	NM_008138	14678	Mm.196464	NM_008138	ENSMUSG00000032562	Gnai2	C76432|Galphai2|Gia|Gnai-2	guanine nucleotide binding protein (G protein), alpha inhibiting 2	protein-coding
unique_peak1-1053-7-1-1.79909083029819-1.80617997398389	chr11	79306931	79307444	+	0	NA	intron (NM_010897, intron 36 of 57)	intron (NM_010897, intron 36 of 57)	-9654	NR_045305	104522	Mm.436987	NR_045305	ENSMUSG00000091523	AU040972	AU040954	expressed sequence AU040972	ncRNA
common_peak2-24014-13-12-0.0780323124966764-0.334470287753051	chr16	21423168	21423714	+	0	NA	intron (NM_001285894, intron 1 of 45)	CpG	250	NM_001285894	209018	Mm.235683	NM_145948	ENSMUSG00000033653	Vps8	AI315068|AU040738|mKIAA0804	vacuolar protein sorting 8 homolog (S. cerevisiae)	protein-coding
common_peak1-12204-10-3-1.35641534500877-1.75805390616669	chr17	33756114	33756544	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-9708	NR_034153	328801	Mm.181488	NM_026712	ENSMUSG00000073423	Zfp414	0610030H11Rik|Znf414	zinc finger protein 414	protein-coding
common_peak2-21371-8-14--0.901668177660948-0.660903317613906	chr11	78368152	78368778	+	0	NA	Intergenic	Intergenic	-4228	NM_133706	69071	Mm.29431	NM_133706	ENSMUSG00000037278	Tmem97	1810014L12Rik|AI115531|AL022956|D11Bhm182e	transmembrane protein 97	protein-coding
common_peak1-11889-13-21--0.680959587999529-0.607095980551316	chr16	97762757	97763232	+	0	NA	intron (NR_003508, intron 2 of 13)	intron (NR_003508, intron 2 of 13)	5304	NM_013606	17858	Mm.14157	NM_013606	ENSMUSG00000023341	Mx2	AI528743|Mx-2	MX dynamin-like GTPase 2	protein-coding
unique_peak1-2298-22-10-1.18785248645011-1.74319850844462	chr15	80916180	80917236	+	0	NA	intron (NM_001082536, intron 2 of 13)	RMER15|LTR|ERVL	18769	NM_153049	223701	Mm.439814	NM_153049	ENSMUSG00000042292	Mkl1	AMKL|Bsac|Mal|Mrtf-A	MKL (megakaryoblastic leukemia)/myocardin-like 1	protein-coding
common_peak1-14557-16-26--0.636623859895407-0.713114929964887	chr3	36151028	36151719	+	0	NA	Intergenic	(TCTA)n|Simple_repeat|Simple_repeat	-30176	NM_198192	229214	Mm.330975	NM_198192	ENSMUSG00000058400	Qrfpr	AQ27|Gpr103|SP9155	pyroglutamylated RFamide peptide receptor	protein-coding
common_peak1-15098-92-127-0.0923520837027647-0.367921102240715	chr3	131488712	131491279	+	0	NA	Intergenic	Lx7|LINE|L1	-258261	NM_020265	56811	Mm.103593	NM_020265	ENSMUSG00000028031	Dkk2	-	dickkopf homolog 2 (Xenopus laevis)	protein-coding
unique_peak2-36923-11-9-0.186765489364251-0.344532117358383	chr3	101112551	101113038	+	0	NA	Intergenic	Intergenic	-20932	NM_013486	12481	Mm.22842	NM_013486	ENSMUSG00000027863	Cd2	LFA-2|Ly-37|Ly37	CD2 antigen	protein-coding
unique_peak2-35526-7-10--0.660340788339108-1.12966497611638	chr17	51583173	51583586	+	0	NA	intron (NR_046166, intron 1 of 4)	intron (NR_046166, intron 1 of 4)	4215	NR_046166	328837	Mm.236143	NR_046166		C330011F03Rik	C330011F03	RIKEN cDNA C330011F03 gene	ncRNA
common_peak1-11008-45-17-1.69043302390256-5.44514020616609	chr15	36931960	36933956	+	0	NA	intron (NM_026521, intron 2 of 3)	MIR|SINE|MIR	4199	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
common_peak1-18538-21-18-0.32156175182265-0.48779450977742	chr8	94686080	94686865	+	0	NA	Intergenic	Intergenic	193547	NR_110452	71296	Mm.86664	NR_033641	ENSMUSG00000031736	Crnde	4933436C20Rik	colorectal neoplasia differentially expressed (non-protein coding)	ncRNA
unique_peak2-36817-12-29--1.25811461052088-1.65862513589797	chr3	87884727	87885701	+	0	NA	promoter-TSS (NM_001033484)	promoter-TSS (NM_001033484)	-759	NM_001033484	404710	Mm.331133	NM_001033484	ENSMUSG00000028068	Iqgap3	AI593484|D030034H08	IQ motif containing GTPase activating protein 3	protein-coding
common_peak1-12984-31-11-1.64027617009197-3.52967372072617	chr19	4148329	4149507	+	0	NA	intron (NM_011778, intron 1 of 10)	intron (NM_011778, intron 1 of 10)	255	NM_011778	23789	Mm.276859	NM_011778	ENSMUSG00000024835	Coro1b	-	coronin, actin binding protein 1B	protein-coding
common_peak1-11048-42-15-1.74232932786718-5.38214435188357	chr15	53266322	53267667	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-89256	NM_010162	14042	Mm.309395	NM_010162		Ext1	AA409028	exostoses (multiple) 1	protein-coding
common_peak1-14140-70-42-1.1937021616733-5.30393000824437	chr2	131392331	131394158	+	0	NA	Intergenic	Intergenic	-5223	NM_013460	11550	Mm.389380	NM_013460		Adra1d	Adra-1|Adra1|Adra1a|Gpcr8|Spr8|[a]1d|alpha1D-AR	adrenergic receptor, alpha 1d	protein-coding
common_peak2-22428-11-19--0.813234510635749-0.769930178837768	chr13	37827300	37827936	+	0	NA	Intergenic	Intergenic	-90289	NM_026830	68750	Mm.491109	NM_026830	ENSMUSG00000039087	Rreb1	1110037N09Rik|AA414966|B930013M22Rik	ras responsive element binding protein 1	protein-coding
common_peak1-9761-21-35--0.600435736176077-0.748982406290541	chr12	54795041	54795736	+	0	NA	intron (NM_013780, intron 4 of 11)	intron (NM_013780, intron 4 of 11)	445724	NM_013780	27386	Mm.247044	NM_013780	ENSMUSG00000021010	Npas3	4930423H22Rik|bHLHe12	neuronal PAS domain protein 3	protein-coding
common_peak2-26717-18-26--0.441968350935117-0.471456499375593	chr2	130273543	130274334	+	0	NA	Intergenic	Intergenic	-2076	NM_008980	19262	Mm.224246	NM_008980	ENSMUSG00000027303	Ptpra	Ptpa|Ptpalpha|Rptpalpha|Rptra|Rptralpha	protein tyrosine phosphatase, receptor type, A	protein-coding
unique_peak2-35455-12-11-0.0638134843664826-0.337263207250336	chr17	35869932	35870518	+	0	NA	Intergenic	B3|SINE|B2	-29141	NM_172962	12305	Mm.5021	NM_007584	ENSMUSG00000003534	Ddr1	6030432F18|AI323681|CD167a|Cak|Nep|PTK3A	discoidin domain receptor family, member 1	protein-coding
common_peak1-13837-11-14--0.398197011356905-0.379391706698377	chr2	59628010	59628599	+	0	NA	intron (NM_001290659, intron 7 of 25)	(TA)n|Simple_repeat|Simple_repeat	92359	NM_001159636	72137	Mm.288734	NM_028118	ENSMUSG00000026988	Wdsub1	1700048E19Rik|2610014F08Rik	WD repeat, SAM and U-box domain containing 1	protein-coding
common_peak2-28761-11-32--1.53570053510684-2.62629506227042	chr5	44134963	44135724	+	0	NA	TTS (NM_001159963)	TTS (NM_001159963)	38045	NM_001159963	242960	Mm.25794	NM_178729	ENSMUSG00000039753	Fbxl5	Fbl4|Fir4	F-box and leucine-rich repeat protein 5	protein-coding
unique_peak2-35058-5-14--1.61127093161437-1.95509489018123	chr16	11322883	11323464	+	0	NA	intron (NM_028964, intron 1 of 20)	intron (NM_028964, intron 1 of 20)	176	NM_028964	74478	Mm.325831	NM_028964	ENSMUSG00000071669	Snx29	4933437K13Rik|ENSMUSG00000079738|Gm11170|Gm1737|Gm930|Rundc2a	sorting nexin 29	protein-coding
common_peak2-28368-27-42--0.434718803806862-0.595371917655149	chr4	137387663	137389098	+	0	NA	Intergenic	(TTCC)n|Simple_repeat|Simple_repeat	-29772	NM_199307	230857	Mm.401062	NM_199307	ENSMUSG00000057530	Ece1	AW322500|ECE-1|ECE-1a|ECE-1b|ECE-1d	endothelin converting enzyme 1	protein-coding
unique_peak1-4560-12-3-1.64877598508764-2.36932189928148	chr3	51701625	51702139	+	0	NA	intron (NM_001004176, intron 1 of 4)	intron (NM_001004176, intron 1 of 4)	207046	NM_001004176	433586	Mm.234972	NM_001004176	ENSMUSG00000061143	Maml3	AV234550|BC049812|Mam-2|mKIAA1816	mastermind like 3 (Drosophila)	protein-coding
unique_peak1-5126-12-1-2.64877598508764-3.36932189928148	chr5	107839096	107839731	+	0	NA	intron (NM_001001804, intron 2 of 6)	B4A|SINE|B4	6881	NM_001001804	384214	Mm.489863	NM_001001804	ENSMUSG00000033805	Ephx4	Abhd7|Ephxrp|Gm1382	epoxide hydrolase 4	protein-coding
common_peak1-8015-13-21--0.680959587999529-0.607095980551316	chr1	167386763	167387296	+	0	NA	intron (NM_028759, intron 1 of 18)	intron (NM_028759, intron 1 of 18)	3565	NM_028759	74106	Mm.227605	NM_028759	ENSMUSG00000026571	Dcaf6	1200006M05Rik|Iqwd1|PC326	DDB1 and CUL4 associated factor 6	protein-coding
common_peak2-31808-46-44-0.406142846919127-0.83767504605574	chr9	37656488	37657892	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-5215	NM_146417	258412	Mm.115804	NM_146417	ENSMUSG00000066749	Olfr877	MOR161-5	olfactory receptor 877	protein-coding
common_peak1-19424-17-14-0.311405742596519-0.466170754204149	chrX	74425408	74426175	+	0	NA	Intergenic	L1Md_A|LINE|L1	-330775	NM_020601	21372	Mm.258476	NM_020601	ENSMUSG00000025246	Tbl1x	5330429M20|Tbl1	transducin (beta)-like 1 X-linked	protein-coding
common_peak2-25328-7-4-0.477162735410827-1.09384600808989	chr18	75909446	75909760	+	0	NA	Intergenic	Intergenic	-52253	NM_201354	269037	Mm.36745	NM_201354	ENSMUSG00000052928	Ctif	Gm672	CBP80/20-dependent translation initiation factor	protein-coding
unique_peak2-38691-5-7--0.704380336005853-1.01466476204226	chr7	101969626	101969891	+	0	NA	Intergenic	RLTR11A2|LTR|ERVK	-1389389	NM_011858	23966	Mm.254610	NM_011858	ENSMUSG00000048078	Tenm4	Doc4|ELM2|Odz4|R75022|Ten-m4|l(7)-3Rn|l7Rn3|mKIAA1302	teneurin transmembrane protein 4	protein-coding
common_peak1-12081-15-35--1.15776025088666-1.87578206828671	chr17	24550057	24550691	+	0	NA	intron (NR_033554, intron 2 of 5)	intron (NR_033554, intron 2 of 5)	1084	NR_033554	654822	Mm.489806	NM_001039561	ENSMUSG00000073437	D330041H03Rik	-	RIKEN cDNA D330041H03 gene	ncRNA
unique_peak1-3593-8-4-0.683294323060208-1.21878474469819	chr19	32157297	32157680	+	0	NA	intron (NM_018830, intron 2 of 23)	L1_Mus4|LINE|L1	20142	NM_018830	54447	Mm.491229	NM_018830	ENSMUSG00000024887	Asah2	AI585898	N-acylsphingosine amidohydrolase 2	protein-coding
unique_peak2-32510-3-6--1.22133801201688-1.08602067057793	chr1	53296657	53296953	+	0	NA	intron (NM_153556, intron 5 of 12)	L1_Mm|LINE|L1	-52344	NM_027070	69397	Mm.307084	NM_027070	ENSMUSG00000060715	1700019A02Rik	-	RIKEN cDNA 1700019A02 gene	protein-coding
common_peak1-12400-32-53--0.475795482943808-0.765450243834444	chr17	70990216	70991255	+	0	NA	intron (NM_001128180, intron 2 of 9)	intron (NM_001128180, intron 2 of 9)	79648	NM_001128181	224997	Mm.311840	NM_027712	ENSMUSG00000003279	Dlgap1	4933422O14Rik|9630002F18|AI845682|AI848168|BB075781|D17Bwg0511e|GKAP/SAPAP|GKPA/SAPAP|Gkap|Sapap1|mKIAA4162	discs, large (Drosophila) homolog-associated protein 1	protein-coding
unique_peak1-1610-9-8-0.0196884049619079-1.03275496310833	chr13	40854490	40855062	+	0	NA	Intergenic	RSINE1|SINE|B4	-25584	NM_011547	21418	Mm.85544	NM_011547	ENSMUSG00000021359	Tfap2a	AP-2|AP2alpha|Ap2|Ap2tf|Tcfap2a	transcription factor AP-2, alpha	protein-coding
unique_peak2-39671-3-8--1.58390809140159-1.39487600375387	chr9	108094086	108094539	+	0	NA	Intergenic	Intergenic	-1598	NM_007567	12217	Mm.20425	NM_007567	ENSMUSG00000032589	Bsn	-	bassoon	protein-coding
common_peak1-18834-10-12--0.344024373132323-0.340565874754526	chr9	14380342	14381047	+	0	NA	intron (NM_001081395, intron 3 of 12)	intron (NM_001081395, intron 3 of 12)	38750	NM_001081395	75723	Mm.159552	NM_001081395	ENSMUSG00000013076	Amotl1	2310010G08Rik|2310067L22Rik|4932416D09Rik|JEAP|mFLJ00155	angiomotin-like 1	protein-coding
common_peak2-26343-10-9-0.0344872501214071-1.05503135781948	chr2	35590192	35590738	+	0	NA	Intergenic	Intergenic	38213	NM_001290639	69601	Mm.29629	NM_001001602	ENSMUSG00000026883	Dab2ip	2310011D08Rik|AI480459|Aip1|mKIAA1743	disabled 2 interacting protein	protein-coding
unique_peak2-34454-6-7--0.434601889619698-0.97990265578305	chr14	25532583	25533014	+	0	NA	Intergenic	Intergenic	222895	NM_011297	20088	Mm.16775	NM_011297	ENSMUSG00000025290	Rps24	-	ribosomal protein S24	protein-coding
common_peak2-25270-13-13--0.0288828914198356-0.309074325783021	chr18	67933308	67933885	+	0	NA	promoter-TSS (NM_028112)	promoter-TSS (NM_028112)	-934	NM_028112	72124	Mm.307315	NM_028112	ENSMUSG00000079614	Seh1l	2610007A16Rik|AW540070|SEC13L|SEH1A|SEH1B|Seh1	SEH1-like (S. cerevisiae	protein-coding
unique_peak2-33147-3-12--2.11442280810037-2.15846853396659	chr10	85871901	85872478	+	0	NA	intron (NM_001164495, intron 3 of 6)	Lx8|LINE|L1	89452	NM_001164495	27204	Mm.394931	NM_013722	ENSMUSG00000059602	Syn3	-	synapsin III	protein-coding
common_peak1-17443-9-6-0.382258484346616-1.11707584880836	chr7	16384230	16384772	+	0	NA	Intergenic	IAP-d-int|LTR|ERVK	40527	NM_145710	252830	Mm.25863	NM_145710	ENSMUSG00000041583	Obox6	D17Ertd599e	oocyte specific homeobox 6	protein-coding
common_peak1-16741-16-26--0.636623859895407-0.713114929964887	chr6	31216784	31217576	+	0	NA	intron (NR_040257, intron 2 of 7)	intron (NR_040257, intron 2 of 7)	46829	NR_040261	73652	Mm.441297	NR_040257	ENSMUSG00000087380	2210408F21Rik	-	RIKEN cDNA 2210408F21 gene	ncRNA
common_peak1-7982-64-57-0.607465406581031-1.75136096541679	chr1	160212740	160214102	+	0	NA	intron (NM_207583, intron 2 of 7)	intron (NM_207583, intron 2 of 7)	72970	NM_207583	240843	Mm.329579	NM_207583	ENSMUSG00000004031	Brinp2	6430517E21Rik|BB361039|Fam5b|mKIAA1747	bone morphogenic protein/retinoic acid inducible neural-specific 2	protein-coding
common_peak2-24318-37-87--0.933438547151479-3.09078640552327	chr17	62880365	62882538	+	0	NA	Intergenic	B3|SINE|B2	349215	NM_207654	13640	Mm.7978	NM_010109		Efna5	AL-1|AV158822|EFL-5|Ephrin-A5|Epl7|LERK-7|RAGS	ephrin A5	protein-coding
unique_peak2-37427-7-5-0.214128329577033-1.01466476204226	chr4	149889952	149890383	+	0	NA	intron (NM_001085492, intron 10 of 22)	intron (NM_001085492, intron 10 of 22)	136116	NM_173774	242773	Mm.29280	NM_173774		Slc45a1	C230078B22|Dnb5	solute carrier family 45, member 1	protein-coding
common_peak1-12257-19-26--0.352200175501782-0.416752705545949	chr17	36836959	36837800	+	0	NA	Intergenic	Intergenic	-28237	NM_177636	224756	Mm.246583	NM_177636	ENSMUSG00000037334	H2-M1	H-2M1|H2-Qa-Mb1|Mb1	histocompatibility 2, M region locus 1	protein-coding
unique_peak1-2635-17-3-2.21829633820504-3.11807310444576	chr16	43666161	43667247	+	0	NA	Intergenic	Intergenic	-2407	NM_001146325	100043314	Mm.390896	NM_001146325	ENSMUSG00000071552	Tigit	ENSMUSG00000071552|Vstm3	T cell immunoreceptor with Ig and ITIM domains	protein-coding
common_peak1-16405-200-181-0.933365698438037-11.9472461400295	chr5	125388761	125391838	+	0	NA	Intergenic	Intergenic	47224	NM_001081750	269704	Mm.138617	NM_001081750	ENSMUSG00000079215	Zfp664	AW060232|D930038J03Rik|ZFOC1|Znf664	zinc finger protein 664	protein-coding
common_peak2-30046-153-183-0.451456350063735-2.68773703184628	chr6	127328976	127331574	+	0	NA	Intergenic	(CCA)n|Simple_repeat|Simple_repeat	-72290	NR_073373	232386	Mm.257367	NR_073373		D130058E03	-	uncharacterized D130058E03	ncRNA
common_peak2-29497-13-8-0.608547029195456-0.660903317613904	chr6	31373006	31373443	+	0	NA	intron (NM_013791, intron 2 of 17)	B4A|SINE|B4	24396	NM_013791	27418	Mm.238038	NM_013791		Mkln1	A130067F06Rik|AU015903|BB154892	muskelin 1, intracellular mediator containing kelch motifs	protein-coding
common_peak1-12787-10-8-0.186490343566457-1.078512453669	chr18	64071670	64072243	+	0	NA	intron (NM_001014981, intron 22 of 27)	L1Md_T|LINE|L1	203607	NM_001014981	104082	Mm.30850	NM_001014981	ENSMUSG00000040560	Wdr7	AI462727|TRAG|mKIAA0541	WD repeat domain 7	protein-coding
common_peak1-11948-10-10--0.103016273628528-0.301029995663987	chr17	5137959	5138431	+	0	NA	intron (NM_001085355, intron 4 of 19)	intron (NM_001085355, intron 4 of 19)	143121	NM_001085355	239985	Mm.133401	NM_001085355	ENSMUSG00000069729	Arid1b	8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235	AT rich interactive domain 1B (SWI-like)	protein-coding
common_peak1-14155-29-40--0.245261924002973-0.373466121463214	chr2	132846492	132847492	+	0	NA	Intergenic	Intergenic	-75220	NM_198029	241639	Mm.209784	NM_198029	ENSMUSG00000027356	Fermt1	5830467P10Rik|Kindlin-1	fermitin family homolog 1 (Drosophila)	protein-coding
unique_peak2-38874-3-8--1.58390809140159-1.39487600375387	chr8	11550333	11550780	+	0	NA	exon (NM_024248, exon 1 of 15)	exon (NM_024248, exon 1 of 15)	215	NM_024248	71941	Mm.196576	NM_024248	ENSMUSG00000056228	Cars2	2310051N18Rik|2410044A07Rik|D530030H10Rik	cysteinyl-tRNA synthetase 2 (mitochondrial)(putative)	protein-coding
unique_peak2-38767-7-6--0.00826409175941478-0.97990265578305	chr7	124630256	124630692	+	0	NA	intron (NM_175645, intron 2 of 11)	MIR|SINE|MIR	105981	NM_175645	233781	Mm.461427	NM_175645	ENSMUSG00000030657	Xylt1	8030490L12	xylosyltransferase 1	protein-coding
common_peak2-28153-9-13--0.617741515653384-0.459837087125828	chr4	106678518	106679054	+	0	NA	intron (NM_198438, intron 4 of 16)	intron (NM_198438, intron 4 of 16)	60685	NM_025500	56280	Mm.29517	NM_025500	ENSMUSG00000028622	Mrpl37	2300004O14Rik|AI132596|MRP-L2|Rpml2	mitochondrial ribosomal protein L37	protein-coding
common_peak1-13360-116-116-0.623764613926016-3.32973990767425	chr19	45659091	45661118	+	0	NA	intron (NM_013907, intron 6 of 8)	intron (NM_013907, intron 6 of 8)	24999	NM_172639	226162	Mm.21978	NM_172639	ENSMUSG00000041035	Dpcd	5330431N19Rik|Ndac	deleted in primary ciliary dyskinesia	protein-coding
common_peak2-29855-14-9-0.577288065470282-0.630231561310125	chr6	99175071	99175524	+	0	NA	intron (NM_053202, intron 3 of 18)	intron (NM_053202, intron 3 of 18)	41212	NM_001197321	108655	Mm.234965	NM_053202	ENSMUSG00000030067	Foxp1	3110052D19Rik|4932443N09Rik|AI461938|AW494214	forkhead box P1	protein-coding
common_peak1-14732-65-83-0.0998485166983665-0.362550921004498	chr3	85573807	85574959	+	0	NA	Intergenic	Intergenic	-24252	NM_172682	229488	Mm.119926	NM_172682	ENSMUSG00000051000	Fam160a1	9930021J17Rik	family with sequence similarity 160, member A1	protein-coding
common_peak1-15598-31-24-0.581382481038399-0.907273387067398	chr4	130107219	130108576	+	0	NA	Intergenic	Intergenic	-17808	NM_025998	67149	Mm.423029	NM_025998		Nkain1	2610200G18Rik|2810426C15Rik	Na+/K+ transporting ATPase interacting 1	protein-coding
common_peak1-11929-67-58-0.661768433421154-2.0787781418229	chr17	71089354	71090893	+	0	NA	intron (NM_001128181, intron 5 of 9)	L1MB4|LINE|L1	105994	NM_001164077	21815	Mm.101034	NM_009372	ENSMUSG00000047407	Tgif1	AA959811|AI462167|Tgif	TGFB-induced factor homeobox 1	protein-coding
common_peak1-12183-22-31--0.352715894912595-0.440892966163086	chr17	31854975	31855799	+	0	NA	Intergenic	Intergenic	40511	NM_001278570	12954	Mm.1228	NM_013501	ENSMUSG00000024041	Cryaa	Acry-1|Crya-1|Crya1|DAcry-1|lop18	crystallin, alpha A	protein-coding
common_peak2-22462-24-66--1.27287928769006-3.73415597305199	chr13	45684258	45685903	+	0	NA	intron (NM_001199304, intron 5 of 6)	intron (NM_001199304, intron 5 of 6)	82242	NM_025508	66355	Mm.290802	NM_025508	ENSMUSG00000000253	Gmpr	2310004P21Rik|AV028449	guanosine monophosphate reductase	protein-coding
common_peak1-15836-14-3-1.89921616035764-2.80787975886178	chr5	139099567	139100183	+	0	NA	Intergenic	Intergenic	35788	NM_183025	243308	Mm.36612	NM_183025	ENSMUSG00000056014	A430033K04Rik	C86988	RIKEN cDNA A430033K04 gene	protein-coding
unique_peak2-36163-4-7--1.02346051385325-1.09384600808989	chr2	27319372	27319768	+	0	NA	exon (NM_023336, exon 2 of 12)	exon (NM_023336, exon 2 of 12)	11348	NM_023336	67382	Mm.28721	NM_023336	ENSMUSG00000026918	Brd3	2410084F24Rik|AW060456|Fsrg2|ORFX|RINGL3	bromodomain containing 3	protein-coding
unique_peak1-229-13-2-2.19350952991661-3.03832868024006	chr1	89102299	89102987	+	0	NA	intron (NM_009604, intron 1 of 11)	intron (NM_009604, intron 1 of 11)	257	NM_009604	11449	Mm.2810	NM_009604	ENSMUSG00000026253	Chrng	Achr-3|Acrg	cholinergic receptor, nicotinic, gamma polypeptide	protein-coding
unique_peak2-34504-6-6--0.241956811677302-0.947717972411649	chr14	47372219	47372519	+	0	NA	Intergenic	Intergenic	-7847	NM_028222	72391	Mm.272394	NM_028222	ENSMUSG00000037628	Cdkn3	2410006H10Rik|KAP	cyclin-dependent kinase inhibitor 3	protein-coding
common_peak2-25846-106-158-0.0248838997213632-0.311887640473017	chr19	41847121	41848920	+	0	NA	intron (NM_027667, intron 10 of 11)	MTD|LTR|MaLR	26569	NR_040320	100502871	Mm.394485	NR_040320		Gm19424	-	predicted gene, 19424	ncRNA
common_peak2-24368-15-18--0.235762762887929-0.326591483156968	chr17	6835577	6836220	+	0	NA	Intergenic	Intergenic	-10255	NR_028305	100040525	Mm.472852	NR_028305		Tmem181c-ps	100040596|ENSMUSG00000079729|ENSMUSG00000079731|Tmem181d-ps	transmembrane protein 181C, pseudogene	pseudo
common_peak2-21140-10-10--0.103016273628528-0.301029995663987	chr11	54936935	54937428	+	0	NA	Intergenic	ORR1B2|LTR|MaLR	25694	NM_010299	14667	Mm.287807	NM_010299	ENSMUSG00000000594	Gm2a	AA408702|AW215435|GM2-AP|SAP-3	GM2 ganglioside activator protein	protein-coding
unique_peak1-4548-12-3-1.64877598508764-2.36932189928148	chr3	38275572	38276171	+	0	NA	Intergenic	L1VL2|LINE|L1	107867	NM_001167883	99696	Mm.290937	NM_001033198	ENSMUSG00000044864	Ankrd50	AI662170|E430012K20Rik|mKIAA1223|mKIAA3019	ankyrin repeat domain 50	protein-coding
common_peak2-20409-7-8--0.370834171144123-1.00793137938329	chr10	24754300	24754744	+	0	NA	Intergenic	Lx|LINE|L1	-107246	NM_007482	11846	Mm.154144	NM_007482	ENSMUSG00000019987	Arg1	AI|AI256583|Arg-1|PGIF	arginase, liver	protein-coding
common_peak2-19733-12-5-1.06381348436648-1.78669045979184	chr1	74027617	74027988	+	0	NA	intron (NM_001289895, intron 17 of 32)	intron (NM_001289895, intron 17 of 32)	-116762	NR_045311	109198	Mm.359721	NR_045311		6030407O03Rik	-	RIKEN cDNA 6030407O03 gene	ncRNA
common_peak1-19485-9-7-0.18961340640422-1.05908390183068	chrX	150459290	150459791	+	0	NA	intron (NM_030036, intron 2 of 2).2	L1Md_F2|LINE|L1	8830	NM_001243017	625713	Mm.489577	NM_001243017	ENSMUSG00000094592	Gm15140	OTTMUSG00000019256	predicted gene 15140	protein-coding
common_peak2-23450-77-101-0.112101237584502-0.384415132402501	chr15	64382018	64383404	+	0	NA	Intergenic	MLT1A0|LTR|MaLR	-168230	NM_010026	13196	Mm.277236	NM_010026	ENSMUSG00000022377	Asap1	AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19	ArfGAP with SH3 domain, ankyrin repeat and PH domain1	protein-coding
common_peak1-13240-17-12-0.517856620063946-0.647240723060192	chr19	29467936	29468699	+	0	NA	Intergenic	L1M5|LINE|L1	-17092	NM_021396	58205	Mm.116737	NM_021396		Pdcd1lg2	B7-DC|Btdc|F730015O22Rik|PD-L2	programmed cell death 1 ligand 2	protein-coding
unique_peak1-4974-6-3-0.565398110380302-1.08602067057793	chr4	107817730	107818237	+	0	NA	Intergenic	Intergenic	-20059	NM_026728	52430	Mm.270783	NM_026728	ENSMUSG00000028601	Echdc2	1300017C12Rik|2610009M20Rik|D4Ertd765e	enoyl Coenzyme A hydratase domain containing 2	protein-coding
unique_peak1-2474-7-5-0.214128329577033-1.01466476204226	chr16	3908735	3909150	+	0	NA	promoter-TSS (NM_028484)	promoter-TSS (NM_028484)	-67	NM_029738	76779	Mm.458921	NM_029738	ENSMUSG00000014232	Cluap1	2310030D15Rik|2610111M03Rik	clusterin associated protein 1	protein-coding
common_peak2-32006-24-20-0.400892479988956-0.591915184368645	chr9	71694200	71695085	+	0	NA	intron (NM_001253862, intron 19 of 19)	Tigger7|DNA|MER2_type	49261	NM_001253864	21406	Mm.171615	NM_011544	ENSMUSG00000032228	Tcf12	A130037E08Rik|ALF1|HEB|HEBAlt|HTF-4|HTF4|ME1|REB|bHLHb20	transcription factor 12	protein-coding
common_peak1-19169-6-7--0.434601889619698-0.97990265578305	chr9	96478045	96478570	+	0	NA	intron (NM_053268, intron 7 of 23)	intron (NM_053268, intron 7 of 23)	53615	NM_053268	114713	Mm.124502	NM_053268	ENSMUSG00000032413	Rasa2	5430433H21Rik|AA517451|AU023900|GAP1m	RAS p21 protein activator 2	protein-coding
unique_peak2-38951-11-12--0.191746133889479-0.310474156842889	chr8	27261376	27261997	+	0	NA	Intergenic	Intergenic	-6955	NM_199042	73754	Mm.383241	NM_199042		Thap1	4833431A01Rik|AW490810	THAP domain containing, apoptosis associated protein 1	protein-coding
unique_peak1-501-12-0-3.64877598508764-4.21441993929574	chr1	180407111	180407860	+	0	NA	intron (NM_026626, intron 6 of 6)	intron (NM_026626, intron 6 of 6)	-51771	NM_001161665	269152	Mm.129727	NM_177724	ENSMUSG00000026494	Kif26b	4832420M10|BC056349|D230039L06Rik	kinesin family member 26B	protein-coding
common_peak2-20896-12-11-0.0638134843664826-0.337263207250336	chr11	4160339	4160834	+	0	NA	intron (NM_008501, intron 1 of 3)	intron (NM_008501, intron 1 of 3)	3015	NM_008501	16878	Mm.4964	NM_008501	ENSMUSG00000034394	Lif	-	leukemia inhibitory factor	protein-coding
unique_peak2-34547-3-13--2.22133801201688-2.36932189928148	chr14	60265248	60265861	+	0	NA	Intergenic	Intergenic	21436	NM_145463	219134	Mm.275409	NM_145463	ENSMUSG00000044461	Shisa2	9430059P22Rik|MAd2|Tmem46|mShisa|shisa	shisa homolog 2 (Xenopus laevis)	protein-coding
common_peak1-17178-39-45-0.0921992908621405-0.338002390994162	chr6	122339364	122340531	+	0	NA	Intergenic	RLTR10B|LTR|ERVK	-49702	NM_001271579	13619	Mm.6822	NM_007905	ENSMUSG00000040669	Phc1	AW557034|Edr|Edr1|Mph1|Rae-28|rae28	polyhomeotic-like 1 (Drosophila)	protein-coding
common_peak2-21310-21-21-0.110057646628938-0.344491671143527	chr11	74770880	74771412	+	0	NA	intron (NM_001002764, intron 8 of 18)	intron (NM_001002764, intron 8 of 18)	31772	NM_001002764	103677	Mm.288460	NM_001002764	ENSMUSG00000038290	Smg6	AI317223|AU041178	Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)	protein-coding
unique_peak2-36670-7-8--0.370834171144123-1.00793137938329	chr3	30510140	30510587	+	0	NA	exon (NM_001289621, exon 5 of 7)	exon (NM_001289621, exon 5 of 7)	9354	NM_001289621	80732	Mm.200378	NM_030557	ENSMUSG00000037730	Mynn	2810011C24Rik|AA415053|AI661031|AW049392|Mynr|SBBIZ1	myoneurin	protein-coding
unique_peak1-5743-7-1-1.79909083029819-1.80617997398389	chr6	48411365	48411885	+	0	NA	exon (NM_173428, exon 29 of 103)	exon (NM_173428, exon 29 of 103)	13397	NM_173428	243369	Mm.25039	NM_173428	ENSMUSG00000029797	Sspo	C79529|Scospondin	SCO-spondin	protein-coding
common_peak1-17436-14-19--0.422711934529718-0.403453972741636	chr7	16206892	16207631	+	0	NA	Intergenic	Intergenic	17865	NM_145707	246791	Mm.425362	NM_145707	ENSMUSG00000066772	Obox3	Ohx	oocyte specific homeobox 3	protein-coding
unique_peak1-1967-10-2-1.77145284428761-2.09384600808989	chr14	118180239	118180777	+	0	NA	intron (NM_011821, intron 4 of 8)	GA-rich|Low_complexity|Low_complexity	172561	NR_105747	102465148		NR_105747	miRBase:MI0021586	Mir6239	mmu-mir-6239	microRNA mir-6239	ncRNA
unique_peak2-35728-2-8--2.08737925770563-1.65811743852845	chr18	35103539	35103991	+	0	NA	intron (NM_010481, intron 9 of 16)	intron (NM_010481, intron 9 of 16)	10240	NM_010481	15526	Mm.209419	NM_010481	ENSMUSG00000024359	Hspa9	74kDa|Csa|Grp75|Hsc74|Hsp74|Hsp74a|Hspa9a|Mortalin|Mot-2|Mot2|Mthsp70|Pbp74	heat shock protein 9	protein-coding
common_peak1-12009-91-201--0.584779537149457-3.13457762411807	chr17	14960554	14962347	+	0	NA	intron (NM_175173, intron 24 of 24)	intron (NM_175173, intron 24 of 24)	118679	NM_175173	71682	Mm.122698	NM_175173	ENSMUSG00000046991	Wdr27	0610012K18Rik	WD repeat domain 27	protein-coding
unique_peak2-33600-7-7--0.200909169701811-0.97990265578305	chr11	90002470	90002884	+	0	NA	Intergenic	B4A|SINE|B4	-108113	NM_026178	67468	Mm.277518	NM_026178	ENSMUSG00000003948	Mmd	1200017E07Rik|1810073C06Rik|AA690185	monocyte to macrophage differentiation-associated	protein-coding
common_peak1-7792-34-17-1.21214352555895-2.67563291309484	chr1	105865381	105867017	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-799197	NM_011800	23836	Mm.103640	NM_011800	ENSMUSG00000050840	Cdh20	Cdh7	cadherin 20	protein-coding
unique_peak2-34740-6-7--0.434601889619698-0.97990265578305	chr15	51848493	51848833	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-22990	NM_175503	239435	Mm.24204	NM_175503	ENSMUSG00000068522	Aard	A5D3|AV328152	alanine and arginine rich domain containing protein	protein-coding
common_peak2-23419-14-27--0.908138761699959-1.05601013496724	chr15	61127563	61128356	+	0	NA	Intergenic	Intergenic	-375134	NM_001081067	117586	Mm.291499	NM_001081067	ENSMUSG00000022347	A1bg	C44	alpha-1-B glycoprotein	protein-coding
unique_peak1-6770-9-2-1.60465090568306-1.87199725847353	chr8	61478984	61479508	+	0	NA	Intergenic	L1_Mus1|LINE|L1	88694	NM_173411	234290	Mm.39244	NM_173411	ENSMUSG00000049946	BC030500	-	cDNA sequence BC030500	protein-coding
unique_peak1-6519-8-0-3.00522241794757-2.70926996097583	chr7	118937286	118937757	+	0	NA	Intergenic	ORR1E|LTR|MaLR	-14030	NM_173739	233733	Mm.323322	NM_173739	ENSMUSG00000038296	Galnt18	2900011G21Rik|BC024988|Galntl4	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 18	protein-coding
common_peak1-10714-12-22--0.874785970969374-0.809260849721102	chr14	61172837	61173626	+	0	NA	Intergenic	Intergenic	-80335	NM_001033272	219140	Mm.149776	NM_001033272	ENSMUSG00000021990	Spata13	C79050|ESTM11|X83327|mFLJ00298	spermatogenesis associated 13	protein-coding
common_peak1-9705-90-63-1.05430502594215-5.85144202413309	chr12	28635007	28636382	+	0	NA	Intergenic	Intergenic	597508	NM_001177964	68511	Mm.310284	NM_001177964		Dcdc2c	1110015M06Rik	doublecortin domain containing 2C	protein-coding
unique_peak2-36259-6-44--2.92645498594937-7.3848548297562	chr2	57221995	57222908	+	0	NA	3' UTR (NM_001145820, exon 17 of 17)	3' UTR (NM_001145820, exon 17 of 17)	131658	NM_010274	14571	Mm.3711	NM_010274	ENSMUSG00000026827	Gpd2	AA408484|AI448216|AU021455|AW494132|GPDH|Gdm1|Gpd-m|Gpdh-m|TISP38	glycerol phosphate dehydrogenase 2, mitochondrial	protein-coding
common_peak2-30992-9-9--0.132314688483142-1.03275496310833	chr8	4613285	4613659	+	0	NA	intron (NM_145591, intron 1 of 3)	intron (NM_145591, intron 1 of 3)	302	NM_145591	233987	Mm.102799	NM_145591		Zfp958	-	zinc finger protein 958	protein-coding
common_peak2-22862-35-34-0.302087241517538-0.529980592868312	chr14	26669189	26670288	+	0	NA	intron (NM_013469, intron 1 of 14)	intron (NM_013469, intron 1 of 14)	8097	NM_013469	11744	Mm.294083	NM_013469	ENSMUSG00000021866	Anxa11	A830099O17Rik|Anx11	annexin A11	protein-coding
unique_peak2-36502-5-10--1.16381195464315-1.33892459842472	chr2	156457479	156457964	+	0	NA	intron (NM_001277187, intron 1 of 11)	B3|SINE|B2	18288	NM_001277186	228836	Mm.22094	NM_146128	ENSMUSG00000061689	Dlgap4	AI225853|BC024558|DAP-4|DAP4|SAPAP-4|Sapap4|WBP16	discs, large homolog-associated protein 4 (Drosophila)	protein-coding
common_peak2-27700-32-94--1.29076358911129-5.3912890827562	chr3	121722669	121724479	+	0	NA	Intergenic	Intergenic	-23804	NM_007378	11304	Mm.3918	NM_007378	ENSMUSG00000028125	Abca4	AW050280|Abc10|Abcr|D430003I15Rik|RmP	ATP-binding cassette, sub-family A (ABC1), member 4	protein-coding
unique_peak1-6965-9-10--0.269818212233077-1.05503135781948	chr8	117156578	117157080	+	0	NA	intron (NM_019573, intron 5 of 8)	intron (NM_019573, intron 5 of 8)	193277	NM_019573	80707	Mm.440420	NM_019573	ENSMUSG00000004637	Wwox	5330426P09Rik|9030416C10Rik|WOX1	WW domain-containing oxidoreductase	protein-coding
common_peak2-31680-53-45-0.617411056358915-1.57728862130806	chr8	126852272	126853300	+	0	NA	intron (NM_139272, intron 7 of 15)	intron (NM_139272, intron 7 of 15)	97492	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
common_peak1-19060-8-8--0.164702583494742-1.00793137938329	chr9	67396162	67396686	+	0	NA	intron (NM_001081242, intron 1 of 57)	intron (NM_001081242, intron 1 of 57)	11086	NM_001081242	70549	Mm.33645	NM_027458	ENSMUSG00000052698	Tln2	5730421P04Rik|AI507121|AI787438|AL118320|mKIAA0320	talin 2	protein-coding
common_peak2-26630-57-56-0.433143025914188-1.0240665209794	chr2	119173847	119175646	+	0	NA	Intergenic	Intergenic	-2232	NM_026929	69065	Mm.35083	NM_026929	ENSMUSG00000027313	Chac1	1810008K03Rik	ChaC, cation transport regulator 1	protein-coding
common_peak2-21159-19-34--0.72659569028328-0.974620203848502	chr11	58322879	58323841	+	0	NA	Intergenic	B1_Mur3|SINE|Alu	-7304	NM_001011861	100502887	Mm.378539	NM_001011861	ENSMUSG00000058807	Olfr331	MOR275-4	olfactory receptor 331	protein-coding
unique_peak1-2728-18-3-2.31291915122835-3.35694334496952	chr16	95766894	95767813	+	0	NA	Intergenic	Intergenic	-15381	NM_133659	13876	Mm.164531	NM_133659	ENSMUSG00000040732	Erg	D030036I24Rik	avian erythroblastosis virus E-26 (v-ets) oncogene related	protein-coding
unique_peak2-39552-2-4--1.23938235115068-0.931118710592187	chr9	70047458	70047879	+	0	NA	Intergenic	RSINE1|SINE|B4	-7489	NM_181072	71602	Mm.249311	NM_181072	ENSMUSG00000032220	Myo1e	2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3	myosin IE	protein-coding
unique_peak1-5168-23-3-2.72176750450908-4.84202874224997	chr5	28500918	28502219	+	0	NA	Intergenic	Intergenic	9332	NM_010134	13799	Mm.4298	NM_010134		En2	BB131122|En-2	engrailed 2	protein-coding
common_peak2-31683-24-42--0.633054851934381-0.913161965438649	chr8	126944874	126945937	+	0	NA	intron (NM_171824, intron 1 of 6)	intron (NM_171824, intron 1 of 6)	12431	NM_171824	209966	Mm.234233	NM_171824	ENSMUSG00000050751	Pgbd5	2900019M05Rik|AI854313	piggyBac transposable element derived 5	protein-coding
unique_peak2-34858-5-16--1.79184317725619-1.61682445937017	chr15	76899135	76899860	+	0	NA	Intergenic	(GGA)n|Simple_repeat|Simple_repeat	-15331	NR_108037	74303	Mm.444304	NR_108037	ENSMUSG00000097267	1700109K24Rik	4933425G21Rik	RIKEN cDNA 1700109K24 gene	ncRNA
unique_peak2-38569-5-8--0.874305337448166-1.10484139239135	chr7	66385061	66385652	+	0	NA	Intergenic	L1Md_T|LINE|L1	-98764	NM_173010	22215	Mm.9002	NM_011668	ENSMUSG00000025326	Ube3a	4732496B02|5830462N02Rik|A130086L21Rik|Hpve6a|mKIAA4216	ubiquitin protein ligase E3A	protein-coding
common_peak1-12458-32-30-0.324895708832785-0.556669751231381	chr17	83990066	83991409	+	0	NA	intron (NM_153512, intron 1 of 1)	intron (NM_153512, intron 1 of 1)	40498	NM_153512	225030	Mm.223506	NM_153512	ENSMUSG00000045053	Kcng3	KV6.3|Kv10.1a|Kv10.1b	potassium voltage-gated channel, subfamily G, member 3	protein-coding
common_peak2-24926-19-14-0.495796731053168-0.607095980551316	chr17	87523548	87524254	+	0	NA	intron (NM_019654, intron 2 of 2)	intron (NM_019654, intron 2 of 2)	16882	NM_019654	56468	Mm.126885	NM_019654	ENSMUSG00000037104	Socs5	1810018L08Rik|Cish5|mKIAA0671	suppressor of cytokine signaling 5	protein-coding
common_peak2-32210-16-37--1.12966387117552-1.94848218498813	chr9	120933424	120934750	+	0	NA	intron (NM_177589, intron 35 of 36)	IAPLTR1_Mm|LTR|ERVK	69883	NR_106058	102465661		NR_106058		Mir7090	mmu-mir-7090	microRNA mir-7090	ncRNA
common_peak1-14592-103-120-0.369134508585446-1.32358901793376	chr3	51224036	51225593	+	0	NA	intron (NM_053089, intron 1 of 19)	(CAAAA)n|Simple_repeat|Simple_repeat	4876	NM_053089	74838	Mm.275281	NM_053089	ENSMUSG00000063273	Naa15	5730450D16Rik|6330400I15|ASTBDN|Narg1|Tbdn-1|mNAT1	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	protein-coding
common_peak1-10543-70-101--0.0524584255960967-0.310851097176051	chr14	18238249	18239357	+	0	NA	Intergenic	Intergenic	-254671	NM_001113417	21834	Mm.32563	NM_009380	ENSMUSG00000021779	Thrb	Nr1a2|T3R[b]|T3Rbeta|Thrb1|Thrb2|c-erbAbeta	thyroid hormone receptor beta	protein-coding
unique_peak1-6686-8-1-2.00522241794757-2.05605744720049	chr8	26805348	26805869	+	0	NA	intron (NM_001081269, intron 15 of 22)	intron (NM_001081269, intron 15 of 22)	-24912	NR_121642	71910	Mm.385055	NM_028000	ENSMUSG00000031570	Ppapdc1b	1810019D05Rik|2310022A04Rik|AW045471|Ppapdc1	phosphatidic acid phosphatase type 2 domain containing 1B	protein-coding
unique_peak1-4040-10-3-1.35641534500877-1.75805390616669	chr2	59175822	59176365	+	0	NA	intron (NM_175464, intron 13 of 20)	intron (NM_175464, intron 13 of 20)	48646	NR_040510	76676	Mm.110038	NR_040510	ENSMUSG00000087455	5330411J11Rik	-	RIKEN cDNA 5330411J11 gene	ncRNA
common_peak2-31274-9-16--0.897849434846119-0.732381977911291	chr8	71676050	71676768	+	0	NA	Intergenic	Intergenic	-11557	NM_199364	211134	Mm.479807	NM_199364	ENSMUSG00000036306	Lzts1	F37|FEZ1	leucine zipper, putative tumor suppressor 1	protein-coding
unique_peak1-1345-7-3-0.799090830298189-1.23214870625617	chr12	16868808	16869322	+	0	NA	Intergenic	B3A|SINE|B2	-32719	NM_009072	19878	Mm.276024	NM_009072	ENSMUSG00000020580	Rock2	B230113H15Rik|ROKalpha|Rho-kinase|Rock-II|Rock2m|mKIAA0619	Rho-associated coiled-coil containing protein kinase 2	protein-coding
common_peak2-23325-49-54-0.224924109500524-0.485273987300002	chr15	36937703	36938833	+	0	NA	Intergenic	Intergenic	-1111	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
unique_peak2-34491-6-17--1.60452689106201-1.49151883326343	chr14	45351074	45351739	+	0	NA	Intergenic	(TCTCTG)n|Simple_repeat|Simple_repeat	-6744	NM_001162954	666744	Mm.387002	NM_001162954	ENSMUSG00000091923	Gm8267	EG666744	predicted gene 8267	protein-coding
unique_peak1-6006-12-6-0.841421063030034-1.58711810488664	chr6	106763284	106763874	+	0	NA	Intergenic	Intergenic	-13498	NM_175357	58799	Mm.290085	NM_021449		Crbn	2610203G15Rik|2900045O07Rik|AF229032|AW108261|piL	cereblon	protein-coding
unique_peak2-34883-5-7--0.704380336005853-1.01466476204226	chr15	79833401	79833793	+	0	NA	intron (NM_011057, intron 3 of 6)	intron (NM_011057, intron 3 of 6)	-4141	NR_106072	102465699		NR_106072		Mir7213	mmu-mir-7213	microRNA mir-7213	ncRNA
unique_peak2-33227-0-5--3.42509343119537-1.32905871926422	chr10	120364053	120364488	+	0	NA	intron (NM_001081193, intron 10 of 12)	intron (NM_001081193, intron 10 of 12)	-28243	NM_177092	320183	Mm.169755	NM_177092	ENSMUSG00000051236	Msrb3	D430026P16Rik|I-8-23|MsrB2	methionine sulfoxide reductase B3	protein-coding
common_peak2-27145-25-29--0.0450406902634128-0.301029995663982	chr3	27886300	27887320	+	0	NA	intron (NM_008875, intron 1 of 25)	intron (NM_008875, intron 1 of 25)	3717	NM_008875	18805	Mm.212039	NM_008875	ENSMUSG00000027695	Pld1	AA536939|C85393|Pld1a|Pld1b	phospholipase D1	protein-coding
unique_peak2-36819-7-8--0.370834171144123-1.00793137938329	chr3	88043113	88043523	+	0	NA	Intergenic	Intergenic	15288	NM_021375	58176	Mm.103777	NM_021375	ENSMUSG00000001417	Rhbg	-	Rhesus blood group-associated B glycoprotein	protein-coding
unique_peak2-34382-8-8--0.164702583494742-1.00793137938329	chr13	116618754	116619209	+	0	NA	Intergenic	Lx8|LINE|L1	480915	NM_021459	16392	Mm.42242	NM_021459	ENSMUSG00000042258	Isl1	-	ISL1 transcription factor, LIM/homeodomain	protein-coding
common_peak1-8337-20-10-1.0286431659539-1.30248952876293	chr10	44079842	44080778	+	0	NA	TTS (NR_035450)	TTS (NR_035450)	828	NR_035450	100316688		NR_035450		Mir1929	mmu-mir-1929	microRNA 1929	ncRNA
common_peak1-7857-9-5-0.604650905683064-1.21398586181642	chr1	133033383	133033833	+	0	NA	intron (NM_145508, intron 1 of 2)	intron (NM_145508, intron 1 of 2)	1203	NM_145508	226419	Mm.39299	NM_145508	ENSMUSG00000016526	Dyrk3	BC006704	dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3	protein-coding
common_peak1-9374-16-16-0.0308008010177225-0.307611222530525	chr11	98192796	98193465	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-2171	NM_010895	18013	Mm.4814	NM_010895	ENSMUSG00000038255	Neurod2	Ndrf|bHLHa1	neurogenic differentiation 2	protein-coding
unique_peak1-7025-50-26-1.28605281431548-4.20651627396374	chr8	126659344	126661614	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-94815	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
unique_peak2-37640-3-13--2.22133801201688-2.36932189928148	chr5	73647420	73647739	+	0	NA	intron (NM_028194, intron 1 of 62)	CpG	278	NM_028194	72313	Mm.260594	NM_028194	ENSMUSG00000070733	Fryl	2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|mKIAA0826	furry homolog-like (Drosophila)	protein-coding
unique_peak2-36617-5-10--1.16381195464315-1.33892459842472	chr3	36552660	36553050	+	0	NA	intron (NM_019510, intron 4 of 11)	intron (NM_019510, intron 4 of 11)	36234	NM_019510	22065	Mm.74363	NM_019510	ENSMUSG00000027716	Trpc3	Mwk|Trcp3|Trp3|Trrp3	transient receptor potential cation channel, subfamily C, member 3	protein-coding
common_peak1-14217-40-64--0.363392130277356-0.620825172320003	chr2	151541912	151543438	+	0	NA	3' UTR (NM_212446, exon 7 of 7)	3' UTR (NM_212446, exon 7 of 7)	14931	NM_001160363	108832	Mm.103494	NM_001160363	ENSMUSG00000044364	Tmem74b	5430405G05Rik	transmembrane protein 74B	protein-coding
unique_peak2-34139-5-10--1.16381195464315-1.33892459842472	chr13	23586640	23587140	+	0	NA	Intergenic	Intergenic	-6164	NM_001289614	238555	Mm.129668	NM_175938		Btn2a2	Btn2|D030063K05	butyrophilin, subfamily 2, member A2	protein-coding
common_peak1-13658-20-8-1.31814978314888-1.77631109801764	chr2	26933733	26934747	+	0	NA	promoter-TSS (NM_029981)	promoter-TSS (NM_029981)	-661	NM_029981	77794	Mm.330088	NM_029981	ENSMUSG00000036040	Adamtsl2	A930008K15Rik|tcp-1	ADAMTS-like 2	protein-coding
common_peak2-21380-28-26-0.298071617657994-0.481798116163919	chr11	79070875	79071752	+	0	NA	Intergenic	ORR1A2|LTR|MaLR	-3116	NM_019653	78889	Mm.307022	NM_019653	ENSMUSG00000017677	Wsb1	1110056B13Rik|2700038M07Rik	WD repeat and SOCS box-containing 1	protein-coding
common_peak1-19240-34-74--0.846750163494614-2.24300019916735	chr9	108517017	108518023	+	0	NA	intron (NM_011790, intron 6 of 15)	intron (NM_011790, intron 6 of 15)	-17589	NM_028944	74443	Mm.226534	NM_028944	ENSMUSG00000006675	P4htm	4933406E20Rik|AI853847|BB128974|Ph-4	prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)	protein-coding
unique_peak2-39014-5-9--1.02630843089322-1.21398586181642	chr8	56223380	56223725	+	0	NA	Intergenic	Intergenic	183471	NM_001253756	234267	Mm.241700	NM_153581	ENSMUSG00000031517	Gpm6a	Gpm6|M6A	glycoprotein m6a	protein-coding
unique_peak2-35533-0-7--3.84013093047421-1.80617997398389	chr17	56079844	56080093	+	0	NA	intron (NM_146249, intron 3 of 3)	RMER6B|LTR|ERVK	4714	NM_146249	240120	Mm.441018	NM_146249		Zfp119b	-	zinc finger protein 119b	protein-coding
common_peak2-27424-4-9--1.34538860874061-1.36011389749466	chr3	89101496	89101886	+	0	NA	Intergenic	Intergenic	-16818	NM_001162425	13636	Mm.15675	NM_010107	ENSMUSG00000027954	Efna1	AI325262|B61|Efl1|Epl1|Eplg1|Lerk1	ephrin A1	protein-coding
unique_peak2-36113-1-4--1.94898510510411-1.10720996964787	chr2	3238848	3239044	+	0	NA	intron (NM_001290369, intron 9 of 12)	intron (NM_001290369, intron 9 of 12)	10954	NM_001013376	227522	Mm.293948	NM_001013376	ENSMUSG00000049950	Rpp38	C330006A15Rik	ribonuclease P/MRP 38 subunit	protein-coding
unique_peak2-34565-8-5-0.420259917226415-1.10484139239135	chr14	65883540	65884081	+	0	NA	Intergenic	Intergenic	-1728	NM_015795	50759	Mm.65308	NM_015795	ENSMUSG00000034532	Fbxo16	4932435C24Rik|Fbx16	F-box protein 16	protein-coding
unique_peak2-36992-5-5--0.289342836727009-0.909929411522249	chr3	121558965	121559298	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	-40998	NM_008991	19299	Mm.399042	NM_008991	ENSMUSG00000028127	Abcd3	AI313901|AU018866|AW146054|PMP68|PMP70|Pxmp1	ATP-binding cassette, sub-family D (ALD), member 3	protein-coding
unique_peak1-1668-9-6-0.382258484346616-1.11707584880836	chr13	67360519	67361198	+	0	NA	intron (NM_001001152, intron 2 of 3)	intron (NM_001001152, intron 2 of 3)	9146	NM_001001152	238690	Mm.306358	NM_001001152	ENSMUSG00000055480	Zfp458	BC062958|Rslcan-7|Znf728|mszf59-2	zinc finger protein 458	protein-coding
unique_peak2-38162-6-7--0.434601889619698-0.97990265578305	chr6	87277191	87277531	+	0	NA	intron (NM_054041, intron 1 of 17)	intron (NM_054041, intron 1 of 17)	8408	NM_054041	69538	Mm.232525	NM_054041	ENSMUSG00000033420	Antxr1	2310008J16Rik|2810405N18Rik|Antrx1|Tem8	anthrax toxin receptor 1	protein-coding
common_peak2-26802-7-5-0.214128329577033-1.01466476204226	chr2	148902290	148902595	+	0	NA	Intergenic	Lx3C|LINE|L1	-201238	NM_009976	13010	Mm.4263	NM_009976	ENSMUSG00000027447	Cst3	CysC	cystatin C	protein-coding
common_peak2-27548-29-81--1.24526192400297-4.37305082379355	chr3	96245496	96246747	+	0	NA	intron (NM_001256180, intron 1 of 4)	intron (NM_001256180, intron 1 of 4)	10108	NM_001256181	329716	Mm.275223	NM_183223	ENSMUSG00000046317	BC107364	D730018G16	cDNA sequence BC107364	protein-coding
common_peak1-9522-46-55-0.0906410211911979-0.348250801558495	chr11	115765097	115766263	+	0	NA	intron (NM_183259, intron 1 of 2)	intron (NM_183259, intron 1 of 2)	4227	NM_183259	66528	Mm.275740	NM_183259	ENSMUSG00000048442	Smim5	2210020M01Rik	small integral membrane protein 5	protein-coding
unique_peak2-33034-7-8--0.370834171144123-1.00793137938329	chr10	69931097	69931673	+	0	NA	intron (NM_024244, intron 3 of 13)	intron (NM_024244, intron 3 of 13)	27727	NM_001143776	71721	Mm.477813	NM_024244	ENSMUSG00000043259	Fam13c	1200015N20Rik|C030038O19Rik|mKIAA1796	family with sequence similarity 13, member C	protein-coding
unique_peak1-4736-12-0-3.64877598508764-4.21441993929574	chr3	107869827	107870504	+	0	NA	Intergenic	RMER1C|Other|Other	18179	NM_001289720	109674	Mm.274335	NM_028779	ENSMUSG00000027889	Ampd2	1200014F01Rik|AI552571|Ampd-2	adenosine monophosphate deaminase 2	protein-coding
unique_peak1-3167-7-7--0.200909169701811-0.97990265578305	chr18	38577401	38577943	+	0	NA	promoter-TSS (NM_022996)	promoter-TSS (NM_022996)	-957	NM_022996	65113	Mm.102496	NM_022996	ENSMUSG00000024425	Ndfip1	0610010M22Rik|N4wbp5	Nedd4 family interacting protein 1	protein-coding
common_peak2-21766-29-23-0.527327579893955-0.844067898188802	chr11	116273460	116274428	+	0	NA	intron (NM_027258, intron 1 of 18)	CpG	402	NM_027258	217340	Mm.426344	NM_027258	ENSMUSG00000052949	Rnf157	2610036E23Rik|A130073L17Rik|mKIAA1917	ring finger protein 157	protein-coding
common_peak1-10196-19-22--0.120874629395327-0.306080386793804	chr13	45001584	45002359	+	0	NA	exon (NM_001205044, exon 9 of 19)	exon (NM_001205044, exon 9 of 19)	95494	NM_025772	94245	Mm.352311	NM_025772	ENSMUSG00000057531	Dtnbp1	5430437B18Rik|AW048963|Bloc1s8|dysbindin|sdy	dystrobrevin binding protein 1	protein-coding
common_peak2-28694-8-5-0.420259917226415-1.10484139239135	chr5	33658168	33658497	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-19889	NM_021500	59003	Mm.281642	NM_021500	ENSMUSG00000079562	Maea	1110030D19Rik|EMP|Gid9	macrophage erythroblast attacher	protein-coding
unique_peak2-39229-3-6--1.22133801201688-1.08602067057793	chr8	111234299	111234715	+	0	NA	Intergenic	Intergenic	-4037	NM_007496	11906	Mm.416972	NM_007496	ENSMUSG00000038872	Zfhx3	A230102L03Rik|Atbf1|WBP9|mKIAA4228	zinc finger homeobox 3	protein-coding
common_peak2-28641-120-149-0.324142929995869-1.2832915957852	chr5	29734836	29736827	+	0	NA	Intergenic	RLTRETN_Mm|LTR|ERVK	-25376	NM_001033457	433864	Mm.262815	NM_001033457		Nom1	D5Kng1|Gm1040	nucleolar protein with MIF4G domain 1	protein-coding
common_peak2-21273-42-44-0.250476231537509-0.522994948702178	chr11	69920169	69921379	+	0	NA	Intergenic	Intergenic	14628	NM_007493	11890	Mm.1357	NM_007493	ENSMUSG00000040963	Asgr2	ASGPR2|Asgr|Asgr-2	asialoglycoprotein receptor 2	protein-coding
common_peak2-24904-22-39--0.674643989799958-0.97145127402441	chr17	84115774	84117093	+	0	NA	intron (NM_001171053, intron 3 of 13)	B1_Mur1|SINE|Alu	10930	NM_001171052	116871	Mm.277668	NM_054082	ENSMUSG00000055817	Mta3	1110002J22Rik|mKIAA1266	metastasis associated 3	protein-coding
unique_peak1-6942-11-5-0.923731083530457-1.477227296591	chr8	110525192	110525762	+	0	NA	Intergenic	Intergenic	-413095	NM_010817	17463	Mm.18347	NM_010817	ENSMUSG00000039067	Psmd7	AW107203|Mov-34|Mov34	proteasome (prosome, macropain) 26S subunit, non-ATPase, 7	protein-coding
common_peak1-19094-25-26-0.106962403181638-0.336580821310522	chr9	71693895	71694922	+	0	NA	intron (NM_001253862, intron 19 of 19)	intron (NM_001253862, intron 19 of 19)	49495	NM_001253864	21406	Mm.171615	NM_011544	ENSMUSG00000032228	Tcf12	A130037E08Rik|ALF1|HEB|HEBAlt|HTF-4|HTF4|ME1|REB|bHLHb20	transcription factor 12	protein-coding
unique_peak1-671-19-0-4.40268732666169-NA	chr10	66921743	66922675	+	0	NA	Intergenic	Intergenic	-78408	NM_010118	13654	Mm.290421	NM_010118	ENSMUSG00000037868	Egr2	Egr-2|Krox-20|Krox20|NGF1-B|Zfp-25|Zfp-6	early growth response 2	protein-coding
unique_peak2-36003-8-10--0.454209200689727-1.078512453669	chr19	38054804	38055392	+	0	NA	intron (NM_001099634, intron 11 of 52)	intron (NM_001099634, intron 11 of 52)	62969	NM_001099634	226101	Mm.34674	NM_177035	ENSMUSG00000048612	Myof	2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3	myoferlin	protein-coding
common_peak1-13516-82-74-0.664444453809854-2.60049418611543	chr2	114654231	114655446	+	0	NA	Intergenic	Intergenic	-174174	NM_025675	66632	Mm.117809	NM_025675	ENSMUSG00000057147	Dph6	5730421E18Rik|Atpbd4	diphthamine biosynthesis 6	protein-coding
unique_peak1-7284-15-1-3.01216475055566-4.18809100057339	chr9	104089115	104089748	+	0	NA	intron (NM_001163026, intron 34 of 55)	intron (NM_001163026, intron 34 of 55)	-60458	NM_145700	252837	Mm.269254	NM_145700	ENSMUSG00000079355	Ackr4	A630091E18Rik|CCBP2|CCR11|CCX-CKR|CCX-CKR1|Ccrl1|Cmkbrl1|PPR1|VSHK1	atypical chemokine receptor 4	protein-coding
unique_peak2-37961-2-8--2.08737925770563-1.65811743852845	chr6	38829820	38830295	+	0	NA	Intergenic	Intergenic	-3868	NM_001294143	15258	Mm.23790	NM_010433	ENSMUSG00000061436	Hipk2	1110014O20Rik|B230339E18Rik|Stank	homeodomain interacting protein kinase 2	protein-coding
common_peak2-26253-23-41--0.67054991826968-1.0364730969458	chr2	30066328	30067610	+	0	NA	Intergenic	RMER2|LTR|ERV1	-5750	NM_172404	70266	Mm.216089	NM_172404	ENSMUSG00000039648	Ccbl1	2010009K05Rik|AI182306|Gtk|Kat1|KatI	cysteine conjugate-beta lyase 1	protein-coding
common_peak1-11559-11-9-0.186765489364251-0.344532117358383	chr16	11176340	11176856	+	0	NA	promoter-TSS (NM_145931)	promoter-TSS (NM_145931)	-112	NM_145931	106205	Mm.226860	NM_145931	ENSMUSG00000037965	Zc3h7a	A430104C18Rik|AI447294|AW556219|HSPC055|Zc3h7|Zc3hdc7	zinc finger CCCH type containing 7 A	protein-coding
common_peak2-32011-65-112--0.328013022938061-0.822356880169644	chr9	72274416	72275981	+	0	NA	Intergenic	Intergenic	-11138	NM_008613	17427	Mm.387671	NM_008613		Mns1	AW546487	meiosis-specific nuclear structural protein 1	protein-coding
unique_peak1-1993-18-12-0.612479433087259-0.739965416525508	chr15	76201740	76202777	+	0	NA	TTS (NM_021555)	TTS (NM_021555)	2930	NM_021555	59053	Mm.133202	NM_021555	ENSMUSG00000022554	Hgh1	Brp16|D15Ertd741e|Fam203a	HGH1 homolog	protein-coding
unique_peak2-34742-7-5-0.214128329577033-1.01466476204226	chr15	53224357	53224660	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-46770	NM_010162	14042	Mm.309395	NM_010162		Ext1	AA409028	exostoses (multiple) 1	protein-coding
common_peak1-19284-36-49--0.16453510360697-0.338002390994162	chr9	119401773	119402995	+	0	NA	intron (NM_001253860, intron 22 of 26)	intron (NM_001253860, intron 22 of 26)	48343	NM_172456	208194	Mm.101578	NM_172456	ENSMUSG00000042787	Exog	AW557704|ENGL-B|ENGL-a|Endogl1|Endogl2|Engl|Engla|Englb	endo/exonuclease (5'-3'), endonuclease G-like	protein-coding
unique_peak2-37417-2-8--2.08737925770563-1.65811743852845	chr4	148901246	148901642	+	0	NA	intron (NM_023465, intron 1 of 4)	intron (NM_023465, intron 1 of 4)	9094	NM_023465	67087	Mm.299735	NM_023465	ENSMUSG00000028988	Ctnnbip1	1110008O09Rik|2310001I19Rik|AW457332|Catnbip1|Icat	catenin beta interacting protein 1	protein-coding
common_peak1-7934-12-17--0.521149016354673-0.417187467413082	chr1	151344717	151345223	+	0	NA	Intergenic	L1Md_T|LINE|L1	463444	NM_008869	18783	Mm.4186	NM_008869	ENSMUSG00000056220	Pla2g4a	Pla2g4|cPLA2|cPLA2alpha	phospholipase A2, group IVA (cytosolic, calcium-dependent)	protein-coding
common_peak2-29750-35-17-1.26144525702019-2.83052996583711	chr6	86487427	86488320	+	0	NA	intron (NR_037960, intron 3 of 4)	B1_Mur3|SINE|Alu	10478	NR_037961	72012	Mm.349174	NR_037960	ENSMUSG00000097048	1600020E01Rik	-	RIKEN cDNA 1600020E01 gene	ncRNA
common_peak1-14632-16-11-0.533301141546906-0.58239619684445	chr3	55113700	55114557	+	0	NA	intron (NM_001111053, intron 3 of 6)	intron (NM_001111053, intron 3 of 6)	67680	NM_001195538	13175	Mm.393242	NM_019978	ENSMUSG00000027797	Dclk1	1700113D08Rik|2810480F11Rik|AI836758|Click-I|Cpg16|Dcamkl1|Dcl|Dclk|mKIAA0369	doublecortin-like kinase 1	protein-coding
common_peak2-23582-17-23--0.366666162516118-0.383878263347744	chr15	79951476	79952618	+	0	NA	Intergenic	MER45R|DNA|Tip100	-11537	NM_025609	66513	Mm.288245	NM_025609	ENSMUSG00000022414	Tab1	2310012M03Rik|Map3k7ip1|b2b449Clo	TGF-beta activated kinase 1/MAP3K7 binding protein 1	protein-coding
common_peak2-22152-10-9-0.0344872501214071-1.05503135781948	chr12	86833275	86833753	+	0	NA	Intergenic	Intergenic	18663	NM_010234	14281	Mm.246513	NM_010234	ENSMUSG00000021250	Fos	D12Rfj1|c-fos|cFos	FBJ osteosarcoma oncogene	protein-coding
unique_peak2-37350-9-5-0.604650905683064-1.21398586181642	chr4	133614678	133615047	+	0	NA	Intergenic	Intergenic	-9505	NM_001162970	230806	Mm.240080	NM_001162970	ENSMUSG00000012123	Aim1l	-	absent in melanoma 1-like	protein-coding
common_peak1-14196-8-0-3.00522241794757-2.70926996097583	chr2	148037005	148037441	+	0	NA	Intergenic	Intergenic	-164518	NM_010446	15376	Mm.938	NM_010446	ENSMUSG00000037025	Foxa2	HNF3-beta|HNF3beta|Hnf-3b|Hnf3b|Tcf-3b|Tcf3b	forkhead box A2	protein-coding
unique_peak1-3762-22-5-2.06232160436625-3.46164246247458	chr19	55005113	55006079	+	0	NA	Intergenic	ORR1B1|LTR|MaLR	168341	NM_008149	14732	Mm.210196	NM_008149	ENSMUSG00000024978	Gpam	GPAT|GPAT1	glycerol-3-phosphate acyltransferase, mitochondrial	protein-coding
common_peak1-14474-36-51--0.221118631973337-0.382513308492835	chr3	121601400	121603112	+	0	NA	Intergenic	B1_Mur4|SINE|Alu	-53988	NM_172525	214137	Mm.229287	NM_172525	ENSMUSG00000039831	Arhgap29	6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1	Rho GTPase activating protein 29	protein-coding
common_peak2-19864-8-7-0.00522241794757061-1.00793137938329	chr1	92473968	92474309	+	0	NA	Intergenic	Intergenic	-25862	NM_133805	108679	Mm.119177	NM_133805	ENSMUSG00000034432	Cops8	9430009J09Rik|AA408242|Csn8|Sgn8	COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)	protein-coding
unique_peak2-32509-5-10--1.16381195464315-1.33892459842472	chr1	52253700	52254240	+	0	NA	intron (NM_001081081, intron 9 of 17)	intron (NM_001081081, intron 9 of 17)	36106	NM_001081081	14660	Mm.398608	NM_001081081	ENSMUSG00000026103	Gls	6330442B14|AI314027|B230365M23Rik	glutaminase	protein-coding
common_peak1-18946-6-17--1.60452689106201-1.49151883326343	chr9	48480268	48480769	+	0	NA	intron (NM_001033324, intron 4 of 6)	intron (NM_001033324, intron 4 of 6)	-67336	NM_010924	18113	Mm.8362	NM_010924	ENSMUSG00000032271	Nnmt	-	nicotinamide N-methyltransferase	protein-coding
common_peak1-8454-43-70--0.367183933980979-0.692838550835943	chr10	79908367	79909365	+	0	NA	Intergenic	MTD|LTR|MaLR	-12468	NM_001164148	21423	Mm.3406	NM_011548	ENSMUSG00000020167	Tcf3	A1|AA408400|ALF2|AW209082|E12|E12/E47|E2A|E47|ME2|Pan1|Pan2|TCF-3|Tcfe2a|VDIR|bHLHb21	transcription factor 3	protein-coding
unique_peak2-38300-0-6--3.64748585253182-1.56314192529759	chr6	135765268	135765684	+	0	NA	intron (NM_008171, intron 6 of 14)	intron (NM_008171, intron 6 of 14)	358053	NM_008171	14812	Mm.436649	NM_008171	ENSMUSG00000030209	Grin2b	AW490526|GluN2B|NR2B|Nmdar2b	glutamate receptor, ionotropic, NMDA2B (epsilon 2)	protein-coding
unique_peak2-37603-3-7--1.41398308995928-1.23214870625617	chr5	57717035	57717483	+	0	NA	Intergenic	Intergenic	391899	NR_015588	319216	Mm.332387	NR_015588	ENSMUSG00000097216	4932441J04Rik	-	RIKEN cDNA 4932441J04 gene	ncRNA
common_peak2-30085-24-12-1.09277018462662-1.73042999925837	chr6	134701246	134701839	+	0	NA	intron (NM_001048054, intron 3 of 6)	RSINE1|SINE|B4	41104	NM_130447	70686	Mm.491182	NM_130447	ENSMUSG00000030203	Dusp16	3830417M17Rik|AW558566|D6Ertd213e|MKP-7|MKP7|Mkpm	dual specificity phosphatase 16	protein-coding
common_peak2-31660-23-24-0.0779113147343562-0.318406410381916	chr8	126595673	126596942	+	0	NA	Intergenic	Intergenic	48934	NM_001029876	382038	Mm.334891	NM_001029876	ENSMUSG00000031976	Urb2	C77575|mKIAA0133	URB2 ribosome biogenesis 2 homolog (S. cerevisiae)	protein-coding
common_peak2-28477-25-14-0.954959309736587-1.46151065785802	chr4	155235287	155235904	+	0	NA	intron (NM_031872, intron 4 of 5)	intron (NM_031872, intron 4 of 5)	1867	NM_031872	83771	Mm.358792	NM_031872	ENSMUSG00000029072	Tas1r3	Sac|T1r3	taste receptor, type 1, member 3	protein-coding
common_peak1-13454-51-40-0.717371820984489-1.79658675346641	chr19	58103837	58105349	+	0	NA	intron (NM_181415, intron 27 of 28)	intron (NM_181415, intron 27 of 28)	-21064	NR_049196	100885835		NR_049196		Mir5623	mmu-mir-5623	microRNA mir-5623	ncRNA
common_peak1-18941-11-8-0.338768582809301-1.14218153353838	chr9	46184191	46184829	+	0	NA	Intergenic	Intergenic	-56441	NM_183104	74361	Mm.159169	NM_183104	ENSMUSG00000056617	4931429L15Rik	-	RIKEN cDNA 4931429L15 gene	protein-coding
common_peak1-17335-42-38-0.456927109004935-0.908349182838243	chr6	147090793	147092447	+	0	NA	Intergenic	B3A|SINE|B2	-37143	NR_033640	100039641	Mm.170402	NR_033640	ENSMUSG00000085600	E330012B07Rik	Gm15768|OTTMUSG00000026071	RIKEN cDNA E330012B07 gene	ncRNA
unique_peak2-37050-5-9--1.02630843089322-1.21398586181642	chr3	135674449	135675065	+	0	NA	Intergenic	MTD|LTR|MaLR	-171524	NR_040540	71038	Mm.410798	NR_040540		4933401H06Rik	-	RIKEN cDNA 4933401H06 gene	ncRNA
unique_peak2-34508-5-15--1.70438033600585-1.4372489031793	chr14	50924315	50924910	+	0	NA	Intergenic	ORR1D1-int|LTR|MaLR	-5607	NM_146663	258657	Mm.377620	NM_146663	ENSMUSG00000090874	Olfr733	MOR241-2	olfactory receptor 733	protein-coding
common_peak2-27012-9-8-0.0196884049619079-1.03275496310833	chr2	173262559	173262908	+	0	NA	Intergenic	Intergenic	-85360	NM_028158	72221	Mm.46132	NM_028158	ENSMUSG00000027518	1700021F07Rik	-	RIKEN cDNA 1700021F07 gene	protein-coding
common_peak2-26210-43-55--0.024791736533901-0.301029995663988	chr2	26351394	26352125	+	0	NA	intron (NM_008714, intron 2 of 33)	intron (NM_008714, intron 2 of 33)	7583	NM_008714	18128	Mm.290610	NM_008714	ENSMUSG00000026923	Notch1	9930111A19Rik|Mis6|N1|Tan1|lin-12	notch 1	protein-coding
common_peak1-16496-10-13--0.450939577048835-0.386243247519795	chr5	139118057	139118582	+	0	NA	Intergenic	Intergenic	54232	NM_183025	243308	Mm.36612	NM_183025	ENSMUSG00000056014	A430033K04Rik	C86988	RIKEN cDNA A430033K04 gene	protein-coding
unique_peak1-6997-7-5-0.214128329577033-1.01466476204226	chr8	122442910	122443394	+	0	NA	intron (NM_009462, intron 1 of 13)	B2_Mm2|SINE|B2	8400	NM_009462	22224	Mm.256910	NM_009462	ENSMUSG00000031826	Usp10	2610014N07Rik|UBPO|Uchrp|mKIAA0190	ubiquitin specific peptidase 10	protein-coding
unique_peak1-2778-22-1-3.6472841050874-6.28700305248716	chr17	6861264	6862332	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-1142	NM_001199948	100040531	Mm.457987	NM_001166627	ENSMUSG00000095677	Dynlt1f	100040631|Dynlt1e	dynein light chain Tctex-type 1F	protein-coding
common_peak1-12001-30-11-1.58471290877072-3.34305003325519	chr17	13698731	13699960	+	0	NA	intron (NR_045437, intron 2 of 3)	B1_Mus2|SINE|Alu	-14977	NR_030763	272667	Mm.444718	NR_030763	ENSMUSG00000079711	Smok4a	4930513D10Rik|Smok2c	sperm motility kinase 4A	pseudo
unique_peak2-38440-7-6--0.00826409175941478-0.97990265578305	chr7	27481761	27482148	+	0	NA	Intergenic	ETnERV2-int|LTR|ERVK	-10505	NM_001081148	243881	Mm.294678	NM_001081148	ENSMUSG00000040650	Cyp2b23	EG243881	cytochrome P450, family 2, subfamily b, polypeptide 23	protein-coding
unique_peak1-4010-12-2-2.06381348436648-2.79529063155376	chr2	35818797	35819312	+	0	NA	intron (NM_029774, intron 1 of 9)	intron (NM_029774, intron 1 of 9)	16090	NM_029774	74410	Mm.21591	NM_028921	ENSMUSG00000026885	Ttll11	4932702F08Rik|4933424A20Rik|AU043211|D2Ertd624e	tubulin tyrosine ligase-like family, member 11	protein-coding
common_peak2-30044-66-56-0.6855936502611-2.22174510361786	chr6	126920641	126922177	+	0	NA	intron (NM_138594, intron 11 of 13)	intron (NM_138594, intron 11 of 13)	31425	NM_138594	28040	Mm.44228	NM_138594	ENSMUSG00000030347	D6Wsu163e	C12orf4	DNA segment, Chr 6, Wayne State University 163, expressed	protein-coding
unique_peak2-37049-6-5--0.0195643903408542-0.947717972411649	chr3	135440324	135440752	+	0	NA	Intergenic	L1MA5|LINE|L1	-47705	NM_026228	67547	Mm.30239	NM_026228	ENSMUSG00000053897	Slc39a8	4933419D20Rik|AA986696|BIGM103|ZIP-8|Zip8	solute carrier family 39 (metal ion transporter), member 8	protein-coding
unique_peak1-3617-13-0-3.77847203063777-4.51544993495972	chr19	34282393	34283122	+	0	NA	intron (NM_029682, intron 1 of 10)	intron (NM_029682, intron 1 of 10)	15997	NM_029682	76630	Mm.130952	NM_029682	ENSMUSG00000024776	Stambpl1	1700095N21Rik|8230401J17Rik|ALMalpha|AMSH-FP	STAM binding protein like 1	protein-coding
common_peak2-30822-68-91-0.0463988232412831-0.319710768292074	chr7	130519050	130520419	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	-1762	NM_025304	30949	Mm.260527	NM_025304	ENSMUSG00000030763	Lcmt1	AL033290|LCMT-1|Lcmt	leucine carboxyl methyltransferase 1	protein-coding
common_peak2-27964-18-16-0.225456309978012-0.397739447719379	chr4	41134555	41135386	+	0	NA	intron (NM_026275, intron 3 of 4)	Lx6|LINE|L1	51916	NM_026275	67615	Mm.389540	NM_026275	ENSMUSG00000036241	Ube2r2	1200003M11Rik|Cdc34b|Ubc3b	ubiquitin-conjugating enzyme E2R 2	protein-coding
unique_peak2-36698-4-5--0.608423014574403-0.909929411522249	chr3	37313828	37314232	+	0	NA	intron (NM_001291044, intron 2 of 4)	intron (NM_001291044, intron 2 of 4)	4488	NM_001291044	229228	Mm.436967	NM_153561	ENSMUSG00000050174	Nudt6	Asfgf2b	nudix (nucleoside diphosphate linked moiety X)-type motif 6	protein-coding
unique_peak1-6793-9-4-0.867685311516858-1.36011389749466	chr8	69920563	69921170	+	0	NA	Intergenic	Intergenic	-93791	NM_008673	17960	Mm.14125	NM_008673	ENSMUSG00000025588	Nat1	Nat-1	N-acetyl transferase 1	protein-coding
common_peak1-19194-14-24--0.74464002941708-0.756118839439549	chr9	99703441	99704157	+	0	NA	Intergenic	Intergenic	72790	NM_011440	20669	Mm.261595	NM_011440	ENSMUSG00000053747	Sox14	-	SRY (sex determining region Y)-box 14	protein-coding
unique_peak2-36857-4-8--1.19338551529556-1.21878474469819	chr3	89421624	89422249	+	0	NA	intron (NM_080466, intron 3 of 7)	B4|SINE|B4	-97008	NM_001038587	56417	Mm.316628	NM_019655	ENSMUSG00000027951	Adar	AV242451|Adar1|Adar1p110|Adar1p150|mZaADAR	adenosine deaminase, RNA-specific	protein-coding
common_peak2-27472-95-163--0.20963665959407-0.615252092647737	chr3	90612564	90615651	+	0	NA	Intergenic	L1_Mus1|LINE|L1	83279	NM_207263	384997	Mm.316644	NM_207263	ENSMUSG00000042250	Pglyrp4	Gm1478|Gm413	peptidoglycan recognition protein 4	protein-coding
unique_peak2-36971-3-9--1.73591118484664-1.57096726280955	chr3	115689393	115689892	+	0	NA	intron (NM_023214, intron 5 of 10)	intron (NM_023214, intron 5 of 10)	20682	NM_023214	66500	Mm.34550	NM_023214	ENSMUSG00000054414	Slc30a7	1810059J10Rik|2610034N15Rik|4833428C12Rik|AI467242|ZnT-7|ZnT7|Zntl2	solute carrier family 30 (zinc transporter), member 7	protein-coding
unique_peak2-34627-9-8-0.0196884049619079-1.03275496310833	chr14	76785354	76785927	+	0	NA	Intergenic	Intergenic	-29988	NM_207652	21807	Mm.153272	NM_009366	ENSMUSG00000022010	Tsc22d1	AA589566|AW105905|Egr5|TSC-22|Tgfb1i4|Tsc|Tsc22	TSC22 domain family, member 1	protein-coding
common_peak2-29524-33-53--0.423549939637939-0.696926118858569	chr6	35539076	35539840	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-49570	NM_008098	14489	Mm.182746	NM_008098	ENSMUSG00000029840	Mtpn	5033418D15Rik|Gcdp|V1	myotrophin	protein-coding
common_peak1-13098-17-18--0.0296311752385474-0.306899554715732	chr19	7482305	7483185	+	0	NA	Intergenic	B3|SINE|B2	-9370	NM_175381	108899	Mm.386838	NM_175381	ENSMUSG00000053080	2700081O15Rik	AI255177|AI848741|AW742297	RIKEN cDNA 2700081O15 gene	protein-coding
unique_peak2-39166-1-6--2.43441193227435-1.56314192529759	chr8	94311282	94311617	+	0	NA	Intergenic	Intergenic	14104	NM_001253822	16373	Mm.238044	NM_008393	ENSMUSG00000031734	Irx3	AI894186	Iroquois related homeobox 3	protein-coding
common_peak1-13065-15-8-0.842239749113344-0.891319708951327	chr19	6235825	6236549	+	0	NA	promoter-TSS (NM_198168)	promoter-TSS (NM_198168)	-347	NM_198168	225849	Mm.118076	NM_198168	ENSMUSG00000024777	Ppp2r5b	B'beta|BC026670	protein phosphatase 2, regulatory subunit B', beta	protein-coding
common_peak1-16366-22-13-0.8399291830298-1.1381569562463	chr5	122518624	122519465	+	0	NA	Intergenic	B4A|SINE|B4	-21210	NM_007804	13048	Mm.156172	NM_007804	ENSMUSG00000042589	Cux2	1700051K22Rik|Cutl2|Cux-2|ENSMUSG00000072641	cut-like homeobox 2	protein-coding
unique_peak2-35144-0-6--3.64748585253182-1.56314192529759	chr16	31453851	31454275	+	0	NA	intron (NM_175177, intron 5 of 6)	intron (NM_175177, intron 5 of 6)	25224	NM_001122683	71911	Mm.293470	NM_175177	ENSMUSG00000046598	Bdh1	2310032J20Rik|AI327223|Bdh	3-hydroxybutyrate dehydrogenase, type 1	protein-coding
common_peak2-27623-34-30-0.427872216614391-0.737357778720995	chr3	105054430	105055810	+	0	NA	Intergenic	L1Md_F2|LINE|L1	185358	NM_029228	75269	Mm.307994	NM_029228	ENSMUSG00000051788	4930564D02Rik	-	RIKEN cDNA 4930564D02 gene	protein-coding
common_peak2-23409-14-7-0.899216160357645-0.947446088118041	chr15	59511637	59512074	+	0	NA	Intergenic	Intergenic	31646	NM_144549	211770	Mm.40298	NM_144549	ENSMUSG00000032501	Trib1	A530090O15Rik|TRB-1|Trb1	tribbles homolog 1 (Drosophila)	protein-coding
common_peak2-19749-19-11-0.81772482594053-0.991115276827166	chr1	75210776	75211344	+	0	NA	TTS (NM_009447)	TTS (NM_009447)	3656	NM_011494	20872	Mm.1155	NM_011494	ENSMUSG00000026201	Stk16	EDPK|Krct|MPSK|PKL12|TSF-1	serine/threonine kinase 16	protein-coding
unique_peak2-39462-2-7--1.91745425626332-1.45399745587252	chr9	53627285	53627761	+	0	NA	intron (NM_028060, intron 1 of 7)	intron (NM_028060, intron 1 of 7)	8181	NM_028060	72022	Mm.26159	NM_028060	ENSMUSG00000042195	Slc35f2	1500009K05Rik|AU019213	solute carrier family 35, member F2	protein-coding
unique_peak2-38199-5-16--1.79184317725619-1.61682445937017	chr6	112320223	112320967	+	0	NA	intron (NM_175525, intron 11 of 11)	intron (NM_175525, intron 11 of 11)	17422	NM_175525	243612	Mm.122653	NM_175525	ENSMUSG00000034387	Ssu2	D630042P16Rik|Fls485|Ssuh2	ssu-2 homolog (C. elegans)	protein-coding
common_peak1-9805-59-84--0.0840269352651237-0.322217193287928	chr12	69371439	69373124	+	0	NA	Intergenic	Lx5|LINE|L1	-602023	NR_033146	100316870	Mm.379794	NR_033146		Gm17821	-	DDB1 and CUL4 associated factor 5 pseudogene	pseudo
common_peak1-17123-13-9-0.456543935750406-0.53895475198017	chr6	115492250	115492764	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-2215	NM_199033	381802	Mm.291208	NM_199033	ENSMUSG00000042389	Tsen2	AU067695	tRNA splicing endonuclease 2 homolog (S. cerevisiae)	protein-coding
unique_peak1-576-6-0-2.5653981103803-2.10720996964787	chr10	4079737	4080213	+	0	NA	Intergenic	Intergenic	-344166	NM_001161822	56533	Mm.44606	NM_019958	ENSMUSG00000019775	Rgs17	6430507P11Rik|Rgsz2	regulator of G-protein signaling 17	protein-coding
common_peak2-24055-21-23--0.0154732354549205-0.305650498375555	chr16	25582683	25583954	+	0	NA	Intergenic	Intergenic	-100533	NM_001127259	22061	Mm.20894	NM_011641	ENSMUSG00000022510	Trp63	AI462811|Ket|P51/P63|P63|P73l|Tp63|Trp53rp1	transformation related protein 63	protein-coding
common_peak1-12107-28-19-0.7310310249341-1.12969433525548	chr17	26200543	26201634	+	0	NA	intron (NM_001162868, intron 1 of 13)	intron (NM_001162868, intron 1 of 13)	5034	NM_001162868	215445	Mm.41191	NM_153140	ENSMUSG00000037098	Rab11fip3	Cart1|D030060O14Rik|Rab11-FIP3|mKIAA0665	RAB11 family interacting protein 3 (class II)	protein-coding
common_peak2-25682-16-7-1.11826364226806-1.23399803405144	chr19	12005490	12005940	+	0	NA	intron (NM_172635, intron 10 of 18)	B1_Mus2|SINE|Alu	7497	NR_105960	102465601		NR_105960		Mir6994	mmu-mir-6994	microRNA mir-6994	ncRNA
unique_peak2-33971-7-4-0.477162735410827-1.09384600808989	chr12	83950439	83950875	+	0	NA	intron (NM_001282061, intron 2 of 16)	intron (NM_001282061, intron 2 of 16)	89485	NR_046045	74283	Mm.398247	NR_046045		1700085C21Rik	-	RIKEN cDNA 1700085C21 gene	ncRNA
common_peak2-20469-12-20--0.743541437691122-0.625923329873571	chr10	43942972	43943769	+	0	NA	Intergenic	L1Md_F2|LINE|L1	8139	NR_027506	70365	Mm.87073	NR_001582		Speer5-ps1	1700007C10Rik|SPEER-5|Speer5-ps	spermatogenesis associated glutamate (E)-rich protein 5, pseudogene 1	pseudo
common_peak1-15160-31-58--0.657404378548718-1.31742449843084	chr3	146520860	146521884	+	0	NA	intron (NM_027594, intron 1 of 20)	intron (NM_027594, intron 1 of 20)	6041	NM_027594	70892	Mm.187793	NM_027594	ENSMUSG00000036745	Ttll7	1110049N09Rik|4921517B04Rik|C630030B20|Ttll7s	tubulin tyrosine ligase-like family, member 7	protein-coding
common_peak2-26635-22-20-0.254966682308644-0.421916810733237	chr2	119337422	119338203	+	0	NA	Intergenic	B1_Mur4|SINE|Alu	-34447	NM_026574	68142	Mm.330496	NM_026574	ENSMUSG00000034154	Ino80	2310079N15Rik|4632409L19Rik|Inoc1	INO80 homolog (S. cerevisiae)	protein-coding
common_peak2-22430-28-29-0.146068524212944-0.357106932979091	chr13	37993368	37994167	+	0	NA	intron (NR_033615, intron 6 of 9)	intron (NR_033615, intron 6 of 9)	13027	NM_001177869	68750	Mm.491109	NM_026830	ENSMUSG00000039087	Rreb1	1110037N09Rik|AA414966|B930013M22Rik	ras responsive element binding protein 1	protein-coding
unique_peak1-1371-8-3-1.00522241794757-1.39487600375387	chr12	40908156	40908678	+	0	NA	intron (NM_001033437, intron 2 of 3)	IAPLTR2_Mm|LTR|ERVK	17485	NM_001033437	380755	Mm.390463	NM_001033437	ENSMUSG00000071342	Lsmem1	Gm889	leucine-rich single-pass membrane protein 1	protein-coding
common_peak1-9153-37-57--0.331987923641753-0.556612435105728	chr11	77077666	77078984	+	0	NA	intron (NM_177710, intron 1 of 14)	intron (NM_177710, intron 1 of 14)	48398	NM_177710	237860	Mm.440381	NM_177710	ENSMUSG00000037926	Ssh2	SSH-2|SSH-2L|mSSH-2L	slingshot homolog 2 (Drosophila)	protein-coding
unique_peak1-368-8-0-3.00522241794757-2.70926996097583	chr1	142867238	142867701	+	0	NA	Intergenic	RLTR6-int|LTR|ERV1	-314490	NR_040604	75910	Mm.483845	NR_040604		4930590L20Rik	-	RIKEN cDNA 4930590L20 gene	ncRNA
common_peak1-7828-18-12-0.612479433087259-0.739965416525508	chr1	127256920	127257868	+	0	NA	Intergenic	L1Md_A|LINE|L1	74910	NM_023735	74117	Mm.183102	NM_023735	ENSMUSG00000026341	Actr3	1200003A09Rik|Arp3	ARP3 actin-related protein 3	protein-coding
common_peak1-8251-28-23-0.467996619100306-0.690880484874617	chr10	19531564	19532650	+	0	NA	Intergenic	CT-rich|Low_complexity|Low_complexity	39158	NM_029529	76157	Mm.74324	NM_029529	ENSMUSG00000050473	Slc35d3	6230421J19Rik|Frcl1	solute carrier family 35, member D3	protein-coding
unique_peak2-38226-3-9--1.73591118484664-1.57096726280955	chr6	115466092	115466469	+	0	NA	Intergenic	Intergenic	-28442	NM_199033	381802	Mm.291208	NM_199033	ENSMUSG00000042389	Tsen2	AU067695	tRNA splicing endonuclease 2 homolog (S. cerevisiae)	protein-coding
common_peak2-26400-30-36--0.039777956137077-0.301029995663973	chr2	57354103	57355156	+	0	NA	Intergenic	L1MB2|LINE|L1	263836	NM_010274	14571	Mm.3711	NM_010274	ENSMUSG00000026827	Gpd2	AA408484|AI448216|AU021455|AW494132|GPDH|Gdm1|Gpd-m|Gpdh-m|TISP38	glycerol phosphate dehydrogenase 2, mitochondrial	protein-coding
common_peak2-24435-4-7--1.02346051385325-1.09384600808989	chr17	21516275	21516663	+	0	NA	Intergenic	RMER15|LTR|ERVL	-4243	NM_172486	210503	Mm.33443	NM_172486	ENSMUSG00000062743	Zfp677	A830058L05Rik|Tce8	zinc finger protein 677	protein-coding
common_peak2-25686-14-11-0.314253659636488-0.435191258261915	chr19	12488238	12488880	+	0	NA	Intergenic	B4A|SINE|B4	-8242	NM_146683	258678	Mm.377635	NM_146683	ENSMUSG00000050815	Olfr1441	MOR215-2	olfactory receptor 1441	protein-coding
common_peak1-19453-11-5-0.923731083530457-1.477227296591	chrX	103555683	103556134	+	0	NA	Intergenic	Intergenic	50743	NR_105803	102465963		NR_105803	miRBase:MI0021913	Mir6382	mmu-mir-6382	microRNA mir-6382	ncRNA
unique_peak2-34754-2-6--1.72480917832092-1.26211192963361	chr15	55134831	55135250	+	0	NA	Intergenic	Intergenic	-4265	NM_181277	12818	Mm.297859	NM_181277	ENSMUSG00000022371	Col14a1	5730412L22Rik|AW108078	collagen, type XIV, alpha 1	protein-coding
common_peak2-21065-25-24-0.217993715570381-0.403610417161433	chr11	48974061	48974904	+	0	NA	TTS (NM_146276)	TTS (NM_146276)	964	NM_146276	258273	Mm.377407	NM_146276	ENSMUSG00000048378	Olfr1394	MOR280-1	olfactory receptor 1394	protein-coding
unique_peak2-36761-10-26--1.3984721571547-1.90052685918624	chr3	63963798	63964541	+	0	NA	Intergenic	L1Md_F3|LINE|L1	-22767	NM_001104592	100125586	Mm.469888	NM_001104592	ENSMUSG00000043897	Vmn2r2	ENSMUSG00000043897	vomeronasal 2, receptor 2	protein-coding
common_peak1-14389-16-8-0.948338640825749-1.02063122982878	chr2	170184723	170185423	+	0	NA	intron (NR_040610, intron 2 of 7)	intron (NR_040610, intron 2 of 7)	3212	NR_040610	73303	Mm.443297	NR_040610	ENSMUSG00000086999	Bcas1os2	1700040N02Rik	breast carcinoma amplified sequence 1, opposite strand 2	ncRNA
unique_peak1-2160-16-6-1.31090872021046-1.49151883326344	chr15	59524883	59525753	+	0	NA	Intergenic	Intergenic	45109	NM_144549	211770	Mm.40298	NM_144549	ENSMUSG00000032501	Trib1	A530090O15Rik|TRB-1|Trb1	tribbles homolog 1 (Drosophila)	protein-coding
common_peak1-18634-26-22-0.404337136101449-0.569352520859861	chr8	110940602	110941787	+	0	NA	Intergenic	Intergenic	167383	NR_077224	109215	Mm.65282	NR_077224		3010033K07Rik	-	RIKEN cDNA 3010033K07 gene	ncRNA
unique_peak1-5843-12-2-2.06381348436648-2.79529063155376	chr6	82722923	82723657	+	0	NA	intron (NM_013820, intron 1 of 17)	CpG	1158	NM_013820	15277	Mm.255848	NM_013820	ENSMUSG00000000628	Hk2	AI642394|HKII	hexokinase 2	protein-coding
common_peak2-21378-19-22--0.120874629395327-0.306080386793804	chr11	78696604	78697481	+	0	NA	Intergenic	RMER10A|LTR|ERVL	-37319	NM_010927	18126	Mm.2893	NM_010927	ENSMUSG00000020826	Nos2	NOS-II|Nos-2|Nos2a|i-NOS|iNOS	nitric oxide synthase 2, inducible	protein-coding
common_peak1-14226-24-12-1.09277018462662-1.73042999925837	chr2	152726654	152727583	+	0	NA	Intergenic	B4A|SINE|B4	-9970	NM_001081044	228785	Mm.250604	NM_001081044	ENSMUSG00000027470	Mylk2	9830004H17Rik|BB138278	myosin, light polypeptide kinase 2, skeletal muscle	protein-coding
common_peak2-21297-8-7-0.00522241794757061-1.00793137938329	chr11	72467292	72467689	+	0	NA	intron (NM_025985, intron 1 of 5)	intron (NM_025985, intron 1 of 5)	-36014	NM_009671	11736	Mm.10313	NM_009671	ENSMUSG00000020790	Ankfy1	Ankhzn|ZFYVE14|mKIAA1255	ankyrin repeat and FYVE domain containing 1	protein-coding
unique_peak1-3338-19-2-2.81772482594053-4.27364484827118	chr18	88905168	88906075	+	0	NA	Intergenic	Intergenic	157978	NM_018821	54607	Mm.91920	NM_018821	ENSMUSG00000056153	Socs6	1500012M23Rik|5830401B18Rik|AI447482|Cis4|Cish4|HSPC060|SOCS-4|SOCS-6|SSI4|STAI4|STATI4|Socs4	suppressor of cytokine signaling 6	protein-coding
common_peak2-25525-58-86--0.146993560958231-0.365535503818061	chr19	5808449	5810432	+	0	NA	Intergenic	Intergenic	-6769	NR_002847	72289	Mm.298256	NR_002847	ENSMUSG00000092341	Malat1	2210401K01Rik|9430072K23Rik|AI647968|Neat2	metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)	ncRNA
common_peak2-19518-53-58-0.258329963054087-0.585993193419137	chr1	63176146	63177638	+	0	NA	intron (NR_045914, intron 1 of 3)	intron (NR_045914, intron 1 of 3)	15578	NR_045914	100380944	Mm.392955	NR_045914	ENSMUSG00000084799	Ino80dos	Gm11602|OTTMUSG00000002611	INO80 complex subunit D, opposite strand	ncRNA
common_peak2-31865-62-95--0.174211041919071-0.421729484740878	chr9	52167537	52169013	+	0	NA	Intergenic	MTC|LTR|MaLR	-192059	NM_001162921	244871	Mm.295686	NM_001162921	ENSMUSG00000035164	Zc3h12c	A230108E06|C230027N18Rik|mKIAA1726	zinc finger CCCH type containing 12C	protein-coding
common_peak2-21186-17-30--0.735899972181837-0.841847921495509	chr11	60179641	60180528	+	0	NA	intron (NM_029044, intron 5 of 13)	intron (NM_029044, intron 5 of 13)	13202	NM_029044	74665	Mm.133570	NM_029044	ENSMUSG00000056598	Lrrc48	4930449E07Rik	leucine rich repeat containing 48	protein-coding
unique_peak2-32576-10-17--0.813509656433543-0.699649909729472	chr1	87078204	87078803	+	0	NA	Intergenic	Intergenic	416882	NM_030194	109032	Mm.335802	NM_030194	ENSMUSG00000070034	Sp110	5031415C07Rik|52kDa|5830484A20Rik|ENSMUSG00000075603|Ifi75|Ipr1	Sp110 nuclear body protein	protein-coding
common_peak2-23001-8-14--0.901668177660948-0.660903317613906	chr14	60378723	60379310	+	0	NA	intron (NM_015803, intron 32 of 35)	intron (NM_015803, intron 32 of 35)	134898	NM_145463	219134	Mm.275409	NM_145463	ENSMUSG00000044461	Shisa2	9430059P22Rik|MAd2|Tmem46|mShisa|shisa	shisa homolog 2 (Xenopus laevis)	protein-coding
unique_peak2-36469-7-14--1.10779976531033-0.817533494790411	chr2	144550361	144550897	+	0	NA	intron (NM_025314, intron 4 of 5)	MER20|DNA|MER1_type	-98773	NM_025490	66328	Mm.45377	NM_025490	ENSMUSG00000027431	Scp2d1	1700010M22Rik	SCP2 sterol-binding domain containing 1	protein-coding
unique_peak1-1928-9-1-2.18961340640422-2.31132995230379	chr14	76630509	76631002	+	0	NA	Intergenic	L1Md_F2|LINE|L1	120057	NM_013745	27275	Mm.21138	NM_013745	ENSMUSG00000022009	Nufip1	Nufip	nuclear fragile X mental retardation protein interacting protein 1	protein-coding
common_peak1-17953-20-19-0.16614668970383-0.348739088570342	chr7	128319686	128320620	+	0	NA	Intergenic	L2a|LINE|L2	93201	NM_139310	246190	Mm.221073	NM_139310	ENSMUSG00000034990	Otoa	-	otoancorin	protein-coding
common_peak1-15356-20-15-0.488074784591193-0.590343908676236	chr4	57153502	57154382	+	0	NA	intron (NM_019427, intron 1 of 15)	intron (NM_019427, intron 1 of 15)	2086	NM_019427	54357	Mm.28217	NM_019427	ENSMUSG00000028434	Epb4.1l4b	6430543G08Rik|AA589614|AU021054|BB007528|D4Ertd346e|Ehm2|Epb41l4b|Lulu2	erythrocyte protein band 4.1-like 4b	protein-coding
common_peak2-23219-18-48--1.30179069288686-2.88064294409843	chr15	3995313	3995879	+	0	NA	intron (NM_024188, intron 3 of 16)	(TTA)n|Simple_repeat|Simple_repeat	-18190	NR_028266	414066	Mm.394461	NR_028266		BC037032	-	cDNA Sequence BC037032	ncRNA
common_peak1-19429-22-50--1.02514123688409-2.14568534968695	chrX	77510886	77511802	+	0	NA	Intergenic	Intergenic	-594570	NM_028025	71967	Mm.379207	NM_028025	ENSMUSG00000046942	Mageb16	2410003J06Rik	melanoma antigen family B, 16	protein-coding
common_peak1-13114-32-14-1.37220142361114-2.96631085054195	chr19	8892764	8893804	+	0	NA	promoter-TSS (NM_001081196)	promoter-TSS (NM_001081196)	500	NM_027412	70387	Mm.261082	NM_027412	ENSMUSG00000071660	Ttc9c	2210019E14Rik|6330408J23Rik	tetratricopeptide repeat domain 9C	protein-coding
common_peak1-13026-9-8-0.0196884049619079-1.03275496310833	chr19	5449737	5450231	+	0	NA	intron (NM_010235, intron 1 of 3)	MIRc|SINE|MIR	2286	NM_010235	14283	Mm.6215	NM_010235	ENSMUSG00000024912	Fosl1	AW538199|Fra1|fra-1	fos-like antigen 1	protein-coding
common_peak1-12990-219-207-0.898793884003577-12.4488538473802	chr19	4212726	4216021	+	0	NA	promoter-TSS (NM_019952)	promoter-TSS (NM_019952)	-19	NM_019952	56708	Mm.347919	NM_019952		Clcf1	Bsf3|CLC	cardiotrophin-like cytokine factor 1	protein-coding
common_peak1-17397-56-85--0.190668929262855-0.436835517045436	chr7	3645028	3646051	+	0	NA	promoter-TSS (NM_024168)	promoter-TSS (NM_024168)	327	NM_001164205	66078	Mm.379100	NM_024168	ENSMUSG00000035585	Tsen34	0610027F08Rik|Leng5	tRNA splicing endonuclease 34 homolog (S. cerevisiae)	protein-coding
common_peak2-20813-26-50--0.744526249813033-1.39836854781781	chr10	127667117	127668712	+	0	NA	3' UTR (NM_008600, exon 4 of 4)	3' UTR (NM_008600, exon 4 of 4)	-1205	NM_001164080	21853	Mm.6458	NM_011589	ENSMUSG00000039994	Timeless	C77407|Debt69|tim	timeless circadian clock 1	protein-coding
common_peak1-13100-22-19-0.325356010200042-0.479250674391597	chr19	8701463	8702453	+	0	NA	3' UTR (NM_008766, exon 10 of 10)	3' UTR (NM_008766, exon 10 of 10)	9472	NM_008766	18399	Mm.30090	NM_008766	ENSMUSG00000024650	Slc22a6	NKT|Oat1|Orctl1|mOat1	solute carrier family 22 (organic anion transporter), member 6	protein-coding
unique_peak2-39046-2-5--1.50241675698448-1.08602067057793	chr8	70518105	70518498	+	0	NA	Intergenic	L1M4|LINE|L1	-19828	NM_177698	234353	Mm.32525	NM_027626	ENSMUSG00000030465	Psd3	4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D	pleckstrin and Sec7 domain containing 3	protein-coding
common_peak1-8330-41-21-1.24171708621136-3.2524299487632	chr10	43977466	43979260	+	0	NA	Intergenic	MYSERV6-int|LTR|ERVK	-9801	NM_053069	11793	Mm.22264	NM_053069	ENSMUSG00000038160	Atg5	2010107M05Rik|3110067M24Rik|AW319544|Apg5l|Atg5l|C88337|Paddy	autophagy related 5	protein-coding
common_peak2-28696-26-18-0.679971578714877-0.959433126956265	chr5	33935709	33936390	+	0	NA	Intergenic	L1M5|LINE|L1	36235	NM_178390	74504	Mm.294695	NM_178390	ENSMUSG00000037339	Fam53a	2410018C17Rik|5430419M09Rik|Dntnp	family with sequence similarity 53, member A	protein-coding
common_peak1-17204-9-9--0.132314688483142-1.03275496310833	chr6	125166427	125166943	+	0	NA	intron (NM_009496, intron 1 of 4)	B1_Mus2|SINE|Alu	1086	NM_001080557	22317	Mm.32321	NM_009496	ENSMUSG00000030337	Vamp1	Syb-1|Syb1|VAMP-1|lew	vesicle-associated membrane protein 1	protein-coding
unique_peak1-5695-8-2-1.42025991722641-1.65811743852845	chr6	34496233	34496795	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	70158	NM_007563	12183	Mm.282863	NM_007563	ENSMUSG00000038871	Bpgm	AI323730|AL022789|C86192	2,3-bisphosphoglycerate mutase	protein-coding
unique_peak2-35496-1-7--2.62705701021674-1.80617997398389	chr17	46275093	46275497	+	0	NA	intron (NM_029338, intron 2 of 4)	RSINE1|SINE|B4	5852	NM_029338	75564	Mm.17993	NM_029338	ENSMUSG00000023966	Rsph9	1700027N10Rik	radial spoke head 9 homolog (Chlamydomonas)	protein-coding
unique_peak1-423-39-9-2.29383315203179-6.88973662387562	chr1	161248045	161249475	+	0	NA	intron (NM_011931, intron 14 of 19)	intron (NM_011931, intron 14 of 19)	-21678	NR_028518	100217414	Mm.450690	NR_028518		Scarna3a	MBI-114	small Cajal body-specific RNA 3A	ncRNA
common_peak2-28751-29-20-0.71997265783635-1.20071330053879	chr5	39761232	39761996	+	0	NA	Intergenic	Intergenic	233199	NR_045416	75095	Mm.332354	NR_045416		4930513D17Rik	-	RIKEN cDNA 4930513D17 gene	ncRNA
common_peak1-14244-21-11-0.984526764545079-1.3750876294627	chr2	154407507	154408314	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-12282	NM_007891	13555	Mm.18036	NM_007891	ENSMUSG00000027490	E2f1	E2F-1|mKIAA4009	E2F transcription factor 1	protein-coding
common_peak2-25063-11-20--0.883623838527147-0.876666802405043	chr18	34651050	34651736	+	0	NA	intron (NM_146084, intron 6 of 20)	B3|SINE|B2	15084	NM_146084	225358	Mm.226899	NM_146084	ENSMUSG00000036501	Fam13b	2610024E20Rik|AW060714|AW546153	family with sequence similarity 13, member B	protein-coding
common_peak2-30539-8-7-0.00522241794757061-1.00793137938329	chr7	70305239	70305685	+	0	NA	intron (NM_007390, intron 2 of 9)	intron (NM_007390, intron 2 of 9)	51950	NM_007390	11441	Mm.113464	NM_007390	ENSMUSG00000030525	Chrna7	Acra7|alpha7	cholinergic receptor, nicotinic, alpha polypeptide 7	protein-coding
common_peak2-21341-58-88--0.179783496075901-0.406403951062135	chr11	76762789	76763665	+	0	NA	intron (NM_178645, intron 2 of 11)	ID_B1|SINE|B4	4069	NM_178645	104184	Mm.399785	NM_178645	ENSMUSG00000020840	Blmh	AI035728|Bh|Bmh	bleomycin hydrolase	protein-coding
unique_peak2-35360-4-7--1.02346051385325-1.09384600808989	chr17	26637763	26638140	+	0	NA	Intergenic	Intergenic	7466	NM_013642	19252	Mm.239041	NM_013642	ENSMUSG00000024190	Dusp1	3CH134|MKP1|Ptpn16|U19515|erp|mkp-1	dual specificity phosphatase 1	protein-coding
unique_peak1-903-7-0-2.79909083029819-2.40823996531185	chr11	40403249	40403649	+	0	NA	Intergenic	L3|LINE|CR1	102735	NM_134017	108645	Mm.293771	NM_134017	ENSMUSG00000042032	Mat2b	1110064C04Rik|2410018D16Rik|AI182287|AU022853|MAT-II|MATIIbeta|TGR	methionine adenosyltransferase II, beta	protein-coding
common_peak2-25343-25-13-1.0544949832875-1.65862513589797	chr18	78072421	78072925	+	0	NA	intron (NM_013831, intron 1 of 14)	RLTR10C|LTR|ERVK	39384	NM_013831	19201	Mm.57174	NM_013831		Pstpip2	MAYP|cmo	proline-serine-threonine phosphatase-interacting protein 2	protein-coding
common_peak1-18030-19-27--0.404667595395917-0.464317215211849	chr7	142533129	142533955	+	0	NA	Intergenic	Intergenic	-68508	NM_183193	270004	Mm.132547	NM_183193	ENSMUSG00000048377	Foxi2	B130055A05Rik	forkhead box I2	protein-coding
common_peak2-24458-26-18-0.679971578714877-0.959433126956265	chr17	23790284	23790939	+	0	NA	Intergenic	Intergenic	-6879	NM_153784	212733	Mm.59997	NM_153784	ENSMUSG00000043782	Ccdc64b	BICDR-2	coiled-coil domain containing 64B	protein-coding
common_peak2-21703-9-8-0.0196884049619079-1.03275496310833	chr11	106811945	106812506	+	0	NA	Intergenic	Intergenic	-30196	NM_025481	66313	Mm.340955	NM_025481	ENSMUSG00000018363	Smurf2	2810411E22Rik|AI558114|AI649275	SMAD specific E3 ubiquitin protein ligase 2	protein-coding
common_peak1-16749-16-14-0.211373046659543-0.364171515310935	chr6	31563282	31564053	+	0	NA	Intergenic	Intergenic	-49730	NM_013723	27205	Mm.89918	NM_013723	ENSMUSG00000025608	Podxl	AW121214|Ly102|PC|PCLP-1|Pclp1	podocalyxin-like	protein-coding
common_peak1-10817-24-32--0.251184216590737-0.358978896303361	chr14	99045486	99046306	+	0	NA	Intergenic	Intergenic	399459	NM_175245	76789	Mm.38912	NM_175245	ENSMUSG00000033186	Mzt1	2410129H14Rik|AI120158|Mozart1	mitotic spindle organizing protein 1	protein-coding
common_peak2-22091-9-7-0.18961340640422-1.05908390183068	chr12	79614729	79615213	+	0	NA	intron (NM_145965, intron 9 of 22)	intron (NM_145965, intron 9 of 22)	-177551	NM_027597	70897	Mm.56514	NM_027597	ENSMUSG00000056987	Fam71d	4921509E07Rik|4930516C23Rik|GARI-L2	family with sequence similarity 71, member D	protein-coding
common_peak1-13664-18-12-0.612479433087259-0.739965416525508	chr2	27417074	27418151	+	0	NA	Intergenic	Intergenic	46945	NM_080848	140858	Mm.28265	NM_080848	ENSMUSG00000026917	Wdr5	2410008O07Rik|AA408785|AA960360|Big|Big-3	WD repeat domain 5	protein-coding
common_peak1-15591-34-33-0.294605685750927-0.53611512876719	chr4	129741618	129742934	+	0	NA	intron (NM_028266, intron 28 of 69)	intron (NM_028266, intron 28 of 69)	17192	NM_028266	107581	Mm.41860	NM_028266	ENSMUSG00000040690	Col16a1	2700007F12Rik|A530052M23Rik|AI838662|CA1F	collagen, type XVI, alpha 1	protein-coding
common_peak2-20365-5-7--0.704380336005853-1.01466476204226	chr10	12921814	12922244	+	0	NA	Intergenic	ID_B1|SINE|B4	-9086	NM_181470	353258	Mm.117581	NM_181470	ENSMUSG00000019814	Ltv1	2610020N02Rik	LTV1 homolog (S. cerevisiae)	protein-coding
unique_peak2-39314-6-4-0.24347001549294-0.989110657569874	chr8	124644752	124645157	+	0	NA	Intergenic	L1MC4|LINE|L1	143030	NR_106096	102466915		NR_106096		Mir7237	mmu-mir-7237	microRNA mir-7237	ncRNA
unique_peak1-5429-6-0-2.5653981103803-2.10720996964787	chr5	114648710	114649163	+	0	NA	intron (NM_133904, intron 12 of 51)	intron (NM_133904, intron 12 of 51)	33409	NM_133904	100705	Mm.81793	NM_133904	ENSMUSG00000042010	Acacb	AI597064|AW743042|Acc2|Accb	acetyl-Coenzyme A carboxylase beta	protein-coding
common_peak2-28343-3-6--1.22133801201688-1.08602067057793	chr4	135353422	135353724	+	0	NA	intron (NM_001085509, intron 24 of 36)	HAL1-2a_MD|LINE|L1	37943	NM_001085509	242702	Mm.318639	NM_001085509	ENSMUSG00000037139	Myom3	8430427K15Rik|Gm434	myomesin family, member 3	protein-coding
common_peak2-29925-9-6-0.382258484346616-1.11707584880836	chr6	115502454	115502803	+	0	NA	intron (NM_199033, intron 3 of 11)	B3A|SINE|B2	7906	NM_199033	381802	Mm.291208	NM_199033	ENSMUSG00000042389	Tsen2	AU067695	tRNA splicing endonuclease 2 homolog (S. cerevisiae)	protein-coding
unique_peak2-33719-12-16--0.4386868561627-0.368541233333383	chr11	113730626	113731588	+	0	NA	exon (NM_172800, exon 9 of 45)	exon (NM_172800, exon 9 of 45)	-117978	NM_001163346	56699	Mm.293378	NM_020006	ENSMUSG00000041598	Cdc42ep4	1500041M20Rik|Borg4|CEP4	CDC42 effector protein (Rho GTPase binding) 4	protein-coding
unique_peak1-1132-13-5-1.19350952991661-1.95509489018123	chr11	95808531	95808977	+	0	NA	Intergenic	Intergenic	15943	NR_037223	100526468		NR_037223	miRBase:MI0014025	Mir3063	mmu-mir-3063	microRNA 3063	ncRNA
unique_peak2-35377-6-6--0.241956811677302-0.947717972411649	chr17	29058537	29058953	+	0	NA	Intergenic	(TCC)n|Simple_repeat|Simple_repeat	-6476	NM_172450	207819	Mm.248931	NM_172450	ENSMUSG00000048905	4930539E08Rik	9130014G02	RIKEN cDNA 4930539E08 gene	protein-coding
common_peak2-21155-14-12-0.198776442216552-0.373562084705529	chr11	58167948	58168564	+	0	NA	Intergenic	Intergenic	24036	NM_024480	79566	Mm.290534	NM_024480	ENSMUSG00000013646	Sh3bp5l	2310074E09Rik|BC003251|mKIAA1720	SH3 binding domain protein 5 like	protein-coding
common_peak1-15677-27-31--0.00845404910476422-0.304476922018591	chr4	137593641	137594431	+	0	NA	intron (NM_001256198, intron 2 of 32)	intron (NM_001256198, intron 2 of 32)	44665	NM_172703	230861	Mm.268903	NM_172703	ENSMUSG00000028760	Eif4g3	1500002J22Rik|4833436O05|4930523M17Rik|G1-419-52|eIF4GII|repro8	eukaryotic translation initiation factor 4 gamma, 3	protein-coding
unique_peak1-2266-34-4-3.0601404321139-8.24625970087838	chr15	78001252	78002456	+	0	NA	intron (NM_025931, intron 1 of 6)	intron (NM_025931, intron 1 of 6)	2684	NM_025931	67042	Mm.30191	NM_025931	ENSMUSG00000016637	Ift27	2600013G09Rik|Rabl4	intraflagellar transport 27	protein-coding
common_peak2-22956-59-104--0.388881516793544-0.982736010510378	chr14	52019523	52020775	+	0	NA	Intergenic	Intergenic	-10527	NM_011686	669149	Mm.377117	NM_011686	ENSMUSG00000000606	Vmn2r88	V2r13|V2r3	vomeronasal 2, receptor 88	protein-coding
unique_peak2-36235-1-5--2.2120195109379-1.32905871926422	chr2	38468533	38468979	+	0	NA	intron (NM_011187, intron 6 of 7)	intron (NM_011187, intron 6 of 7)	30670	NM_011187	19177	Mm.389251	NM_011187	ENSMUSG00000026750	Psmb7	AU020723|MC14	proteasome (prosome, macropain) subunit, beta type 7	protein-coding
common_peak2-25538-10-9-0.0344872501214071-1.05503135781948	chr19	5942054	5942560	+	0	NA	intron (NM_001164057, intron 16 of 17)	intron (NM_001164057, intron 16 of 17)	-17491	NM_026772	104252	Mm.491103	NM_026772	ENSMUSG00000045664	Cdc42ep2	1110008C05Rik|Borg1|Cep2|D19Bwg1013e	CDC42 effector protein (Rho GTPase binding) 2	protein-coding
common_peak1-17592-52-51-0.407820272124607-0.889546191492162	chr7	44245498	44247127	+	0	NA	Intergenic	Intergenic	2273592	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak2-37886-2-9--2.23938235115068-1.87199725847353	chr5	139797193	139797565	+	0	NA	intron (NM_172723, intron 1 of 10)	L1MB3|LINE|L1	4039	NM_172723	231821	Mm.297819	NM_172723	ENSMUSG00000056413	Adap1	4930431P11Rik|Centa1|GC1L|p42IP4	ArfGAP with dual PH domains 1	protein-coding
common_peak1-15156-23-60--1.20896983305381-3.30112488607945	chr3	146450232	146451103	+	0	NA	intron (NM_011100, intron 1 of 9)	ORR1A2|LTR|MaLR	-6287	NM_001164200	18749	Mm.16766	NM_011100	ENSMUSG00000005034	Prkacb	Pkacb	protein kinase, cAMP dependent, catalytic, beta	protein-coding
common_peak1-14101-39-49--0.0280949428555708-0.301029995663988	chr2	125858423	125859436	+	0	NA	intron (NM_029455, intron 11 of 16)	intron (NM_029455, intron 11 of 16)	-1465	NM_008008	14178	Mm.330557	NM_008008	ENSMUSG00000027208	Fgf7	Kgf	fibroblast growth factor 7	protein-coding
unique_peak1-2417-12-7-0.648775985087639-0.697979855752659	chr15	99717350	99718167	+	0	NA	Intergenic	LTRIS2|LTR|ERV1	-11871	NM_001113545	65970	Mm.33207	NM_023063	ENSMUSG00000023022	Lima1	Eplin	LIM domain and actin binding 1	protein-coding
unique_peak2-36506-3-7--1.41398308995928-1.23214870625617	chr2	157134630	157135011	+	0	NA	intron (NM_019642, intron 9 of 16)	intron (NM_019642, intron 9 of 16)	-29535	NM_001039557	629499	Mm.384235	NM_001039557	ENSMUSG00000074627	Mroh8	4922505G16Rik	maestro heat-like repeat family member 8	protein-coding
common_peak2-24446-36-66--0.586768104290018-1.1689717347007	chr17	22360851	22362066	+	0	NA	intron (NM_001205095, intron 1 of 4)	intron (NM_001205095, intron 1 of 4)	1123	NM_001205095	240038	Mm.227945	NM_001205095	ENSMUSG00000096433	Gm4944	EG240038	predicted gene 4944	protein-coding
common_peak2-19795-95-106-0.406448358622868-1.43981869588929	chr1	87213346	87214734	+	0	NA	Intergenic	Intergenic	281345	NM_030194	109032	Mm.335802	NM_030194	ENSMUSG00000070034	Sp110	5031415C07Rik|52kDa|5830484A20Rik|ENSMUSG00000075603|Ifi75|Ipr1	Sp110 nuclear body protein	protein-coding
unique_peak1-316-11-8-0.338768582809301-1.14218153353838	chr1	131511886	131512558	+	0	NA	intron (NM_172485, intron 4 of 27)	intron (NM_172485, intron 4 of 27)	342341	NM_172485	210417	Mm.380518	NM_172485	ENSMUSG00000042581	Thsd7b	1700074E13Rik|B930082A18|D130067I03Rik	thrombospondin, type I, domain containing 7B	protein-coding
common_peak1-13924-47-61--0.0193548856203272-0.301029995663994	chr2	84650131	84651338	+	0	NA	TTS (NM_024230)	TTS (NM_024230)	11749	NM_019949	56791	Mm.38261	NM_019949	ENSMUSG00000027078	Ube2l6	2810489I21Rik|RIG-B|UBCH8|Ubce8|Ubcm8	ubiquitin-conjugating enzyme E2L 6	protein-coding
common_peak2-27667-68-161--0.769889223586328-4.03798630937804	chr3	109122362	109123871	+	0	NA	Intergenic	L1_Mm|LINE|L1	-20485	NM_020505	57257	Mm.282257	NM_020505	ENSMUSG00000033721	Vav3	A530094I06Rik|AA986410|Idd18.1	vav 3 oncogene	protein-coding
unique_peak2-37664-2-5--1.50241675698448-1.08602067057793	chr5	92857219	92857651	+	0	NA	intron (NM_183392, intron 3 of 11)	intron (NM_183392, intron 3 of 11)	6790	NM_183392	269113	Mm.275289	NM_183392	ENSMUSG00000034826	Nup54	3110079L04Rik|54kDa	nucleoporin 54	protein-coding
common_peak1-17250-52-72--0.0815645686143185-0.314891503798722	chr6	129532757	129534027	+	0	NA	intron (NM_153590, intron 5 of 6)	intron (NM_153590, intron 5 of 6)	5088	NM_153590	243655	Mm.30968	NM_153590	ENSMUSG00000050241	Klre1	Klre-1|NKG2I	killer cell lectin-like receptor family E member 1	protein-coding
unique_peak1-980-9-1-2.18961340640422-2.31132995230379	chr11	63987968	63988463	+	0	NA	Intergenic	ORR1C2|LTR|MaLR	95229	NR_033780	66456	Mm.124828	NR_033780	ENSMUSG00000087497	2810001G20Rik	AW045514	RIKEN cDNA 2810001G20 gene	ncRNA
unique_peak2-35242-4-6--0.830815435910851-0.989110657569874	chr16	95774173	95774508	+	0	NA	Intergenic	Intergenic	-22368	NM_133659	13876	Mm.164531	NM_133659	ENSMUSG00000040732	Erg	D030036I24Rik	avian erythroblastosis virus E-26 (v-ets) oncogene related	protein-coding
common_peak1-18479-40-62--0.318304240748819-0.533919121953929	chr8	84831714	84832880	+	0	NA	Intergenic	Intergenic	94188	NM_001254747	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak2-22539-73-85-0.266130251723124-0.675836349268242	chr13	56134643	56136193	+	0	NA	Intergenic	Intergenic	101493	NM_012015	26914	Mm.283802	NM_012015	ENSMUSG00000015937	H2afy	H2AF12M|mH2a1|macroH2A1	H2A histone family, member Y	protein-coding
common_peak1-8519-38-32-0.527058539940077-1.00060938969219	chr10	84917069	84918142	+	0	NA	intron (NM_028709, intron 1 of 16)	intron (NM_028709, intron 1 of 16)	68046	NM_028709	74007	Mm.36544	NM_028709	ENSMUSG00000020042	Btbd11	6330404E16Rik	BTB (POZ) domain containing 11	protein-coding
common_peak2-31233-12-37--1.59915152835595-2.90875693252979	chr8	69996553	69997468	+	0	NA	Intergenic	Lx5|LINE|L1	-17647	NM_008673	17960	Mm.14125	NM_008673	ENSMUSG00000025588	Nat1	Nat-1	N-acetyl transferase 1	protein-coding
common_peak2-23149-88-134--0.0614031878802983-0.321672611971975	chr14	115040454	115042230	+	0	NA	Intergenic	Intergenic	-189845	NR_045661	75822	Mm.410813	NR_045661		4930524C18Rik	-	RIKEN cDNA 4930524C18 gene	ncRNA
common_peak1-16693-28-54--0.728400593703197-1.41268768702114	chr6	17280890	17282047	+	0	NA	intron (NM_007616, intron 2 of 2)	intron (NM_007616, intron 2 of 2)	23828	NM_001243064	12389	Mm.28278	NM_007616	ENSMUSG00000007655	Cav1	Cav|Cav-1	caveolin 1, caveolae protein	protein-coding
common_peak2-27178-96-134-0.0892356173044977-0.379157367625731	chr3	35931980	35933475	+	0	NA	intron (NM_178418, intron 4 of 11)	intron (NM_178418, intron 4 of 11)	19742	NM_178418	241943	Mm.269018	NM_178418	ENSMUSG00000047696	Ccdc144b	-	coiled-coil domain containing 144B	protein-coding
common_peak2-22213-13-10-0.319040412000471-0.446472590016315	chr12	112586399	112586908	+	0	NA	intron (NM_183016, intron 1 of 36)	intron (NM_183016, intron 1 of 36)	29276	NM_183016	217866	Mm.27397	NM_183016	ENSMUSG00000021279	Cdc42bpb	MRCKb	CDC42 binding protein kinase beta	protein-coding
common_peak1-8033-24-28--0.0647710923598552-0.301029995663979	chr1	171149847	171151155	+	0	NA	Intergenic	Intergenic	311094	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
unique_peak2-32724-6-5--0.0195643903408542-0.947717972411649	chr1	162000002	162000381	+	0	NA	intron (NM_001162896, intron 1 of 2)	intron (NM_001162896, intron 1 of 2)	7858	NR_038030	75255	Mm.414845	NR_038030	ENSMUSG00000026729	4930562F07Rik	-	RIKEN cDNA 4930562F07 gene	ncRNA
common_peak1-7669-7-10--0.660340788339108-1.12966497611638	chr1	75235844	75236310	+	0	NA	intron (NM_178055, intron 4 of 9)	intron (NM_178055, intron 4 of 9)	2800	NM_001159885	56812	Mm.489660	NM_020266		Dnajb2	2700059H22Rik|Dnajb10|Hsj1|mDj8	DnaJ (Hsp40) homolog, subfamily B, member 2	protein-coding
common_peak1-13163-25-18-0.613922391901521-0.86528749982161	chr19	10818084	10819077	+	0	NA	intron (NR_027805, intron 1 of 3)	intron (NR_027805, intron 1 of 3)	3143	NR_027805	403202	Mm.34482	NM_207529	ENSMUSG00000067577	A430093F15Rik	Gm674	RIKEN cDNA A430093F15 gene	ncRNA
common_peak2-19646-17-6-1.41094141614743-1.84350559086818	chr1	43168851	43169261	+	0	NA	intron (NM_133818, intron 3 of 3)	intron (NM_133818, intron 3 of 3)	13501	NM_133818	98404	Mm.28817	NM_133818	ENSMUSG00000010290	AI597479	-	expressed sequence AI597479	protein-coding
unique_peak1-6510-17-0-4.21829633820504-6.02059991327962	chr7	116825405	116825832	+	0	NA	Intergenic	L1M2|LINE|L1	-21633	NM_020616	57373	Mm.334138	NM_020616	ENSMUSG00000031023	Akip1	BCA3|C11orf17|D7H11orf17|D930014E17Rik|ICRFP703B1614Q5.6|ORF27	A kinase (PRKA) interacting protein 1	protein-coding
unique_peak2-39891-3-8--1.58390809140159-1.39487600375387	chrX	75842922	75843482	+	0	NA	Intergenic	Intergenic	-13966	NM_027322	546336	Mm.211712	NM_027322	ENSMUSG00000047996	Prrg1	2010007L08Rik	proline rich Gla (G-carboxyglutamic acid) 1	protein-coding
common_peak1-12798-8-16--1.08224042330277-0.891319708951328	chr18	65050902	65051365	+	0	NA	intron (NM_001114386, intron 1 of 30)	intron (NM_001114386, intron 1 of 30)	3723	NM_001114386	83814	Mm.98668	NM_031881	ENSMUSG00000024589	Nedd4l	1300012C07Rik|Nedd4-2|Nedd4b	neural precursor cell expressed, developmentally down-regulated gene 4-like	protein-coding
common_peak2-31785-51-78--0.22885692257453-0.482409833682749	chr9	31029656	31031223	+	0	NA	intron (NR_037304, intron 1 of 3)	intron (NR_037304, intron 1 of 3)	-11039	NM_001102456	11804	Mm.19133	NM_009691	ENSMUSG00000031996	Aplp2	AI790698|APLP-2	amyloid beta (A4) precursor-like protein 2	protein-coding
common_peak2-27189-23-44--0.770085591820594-1.3174917037782	chr3	36863076	36863656	+	0	NA	intron (NM_172679, intron 37 of 85)	L1_Mur2|LINE|L1	-99212	NM_009350	21744	Mm.8122	NM_009350	ENSMUSG00000027719	Adad1	Tenr	adenosine deaminase domain containing 1 (testis specific)	protein-coding
common_peak1-12916-63-78-0.134531842893487-0.407682472603649	chr18	88893251	88894593	+	0	NA	Intergenic	L1Md_F2|LINE|L1	169677	NM_018821	54607	Mm.91920	NM_018821	ENSMUSG00000056153	Socs6	1500012M23Rik|5830401B18Rik|AI447482|Cis4|Cish4|HSPC060|SOCS-4|SOCS-6|SSI4|STAI4|STATI4|Socs4	suppressor of cytokine signaling 6	protein-coding
common_peak2-28193-9-12--0.510826311736872-0.394412252720706	chr4	116557557	116558070	+	0	NA	intron (NM_001029912, intron 1 of 13)	intron (NM_001029912, intron 1 of 13)	7806	NM_001029912	74464	Mm.218946	NM_001029912	ENSMUSG00000033948	Zswim5	4933426E21Rik|AI503093|mKIAA1511	zinc finger SWIM-type containing 5	protein-coding
common_peak2-25071-40-87--0.800455935886199-2.36410943273731	chr18	35021936	35023447	+	0	NA	exon (NM_007913, exon 2 of 2)	exon (NM_007913, exon 2 of 2)	1830	NM_007913	13653	Mm.181959	NM_007913		Egr1	A530045N19Rik|ETR103|Egr-1|Krox-1|Krox-24|Krox24|NGF1-A|NGFI-A|NGFIA|TIS8|Zenk|Zfp-6|Zif268|egr	early growth response 1	protein-coding
unique_peak1-1605-12-2-2.06381348436648-2.79529063155376	chr13	37854591	37855207	+	0	NA	Intergenic	Intergenic	-63008	NM_026830	68750	Mm.491109	NM_026830	ENSMUSG00000039087	Rreb1	1110037N09Rik|AA414966|B930013M22Rik	ras responsive element binding protein 1	protein-coding
unique_peak1-1926-12-3-1.64877598508764-2.36932189928148	chr14	76598705	76599263	+	0	NA	Intergenic	Intergenic	88286	NM_013745	27275	Mm.21138	NM_013745	ENSMUSG00000022009	Nufip1	Nufip	nuclear fragile X mental retardation protein interacting protein 1	protein-coding
unique_peak2-39276-5-11--1.28934283672701-1.477227296591	chr8	121890379	121890742	+	0	NA	Intergenic	(TAGA)n|Simple_repeat|Simple_repeat	22122	NM_024219	68196	Mm.358714	NM_024219	ENSMUSG00000031839	Hsbp1	0610007A03Rik|AA408769|Hsp25	heat shock factor binding protein 1	protein-coding
unique_peak1-1675-9-5-0.604650905683064-1.21398586181642	chr13	69604206	69604794	+	0	NA	Intergenic	GA-rich|Low_complexity|Low_complexity	68242	NM_198600	210106	Mm.315959	NM_198600	ENSMUSG00000034575	Papd7	LAK-1|POLK|Pols|TRF4|TRF4-1	PAP associated domain containing 7	protein-coding
unique_peak1-3683-8-1-2.00522241794757-2.05605744720049	chr19	42187320	42187716	+	0	NA	intron (NM_145501, intron 4 of 8)	intron (NM_145501, intron 4 of 8)	15965	NM_027106	69534	Mm.30060	NM_027106	ENSMUSG00000018821	Avpi1	2310008N12Rik|AA410041|VIT32|esu|mVIT32	arginine vasopressin-induced 1	protein-coding
unique_peak2-32827-4-15--2.02346051385325-2.4322161449009	chr1	189777673	189778515	+	0	NA	intron (NM_001243792, intron 2 of 7)	intron (NM_001243792, intron 2 of 7)	-43612	NM_011935	26381	Mm.89989	NM_011935	ENSMUSG00000026610	Esrrg	ERR3|Errg|NR3B3|mKIAA0832	estrogen-related receptor gamma	protein-coding
unique_peak1-3282-19-2-2.81772482594053-4.27364484827118	chr18	74442267	74443021	+	0	NA	promoter-TSS (NM_028948)	promoter-TSS (NM_028948)	-110	NR_029424	74453	Mm.182293	NM_028948	ENSMUSG00000035394	Ccdc11	4933415I03Rik	coiled-coil domain containing 11	protein-coding
unique_peak2-35142-6-7--0.434601889619698-0.97990265578305	chr16	31234878	31235376	+	0	NA	intron (NR_035427, intron 1 of 2)	intron (NR_035427, intron 1 of 2)	-33803	NM_030138	78618	Mm.274646	NM_030138	ENSMUSG00000049076	Acap2	4832442G16|9530039J15Rik|CNT-B2|Centb2|mKIAA0041	ArfGAP with coiled-coil, ankyrin repeat and PH domains 2	protein-coding
unique_peak1-2011-7-1-1.79909083029819-1.80617997398389	chr15	6622911	6623386	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-35233	NM_030168	78757	Mm.275811	NM_030168	ENSMUSG00000050310	Rictor	4921505C17Rik|6030405M08Rik|AVO3|AW492497|D530039E11Rik	RPTOR independent companion of MTOR, complex 2	protein-coding
unique_peak1-5458-19-5-1.81772482594053-2.59995804677862	chr5	122693142	122694081	+	0	NA	intron (NM_001039153, intron 12 of 13)	intron (NM_001039153, intron 12 of 13)	20858	NR_104441	654470	Mm.28804	NM_001039153	ENSMUSG00000038593	Tctn1	G730031O11Rik|Tect1	tectonic family member 1	protein-coding
common_peak1-7816-26-38--0.357503126703786-0.505877949819268	chr1	125560852	125561779	+	0	NA	intron (NM_199021, intron 4 of 25)	Lx2|LINE|L1	380821	NM_199021	269109	Mm.483255	NM_199021	ENSMUSG00000036815	Dpp10	6430601K09Rik|DPP X|Dprp3	dipeptidylpeptidase 10	protein-coding
common_peak2-28522-56-52-0.507675370876044-1.21053550697015	chr5	98942951	98943937	+	0	NA	intron (NM_001024614, intron 3 of 5)	intron (NM_001024614, intron 3 of 5)	-38761	NR_030484	735265		NR_030484		Mir703	Mirn703|mmu-mir-703	microRNA 703	ncRNA
common_peak1-14146-17-8-1.04837133676273-1.30305656033811	chr2	132091946	132092814	+	0	NA	intron (NM_138651, intron 1 of 12)	B2_Mm2|SINE|B2	3496	NM_138651	110911	Mm.284503	NM_138651	ENSMUSG00000058793	Cds2	5730450N06Rik|5730460C18Rik|AI854580|D2Wsu127e	CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2	protein-coding
unique_peak1-6613-8-2-1.42025991722641-1.65811743852845	chr8	3353015	3353555	+	0	NA	promoter-TSS (NM_001033378)	promoter-TSS (NM_001033378)	-130	NM_001033378	319493	Mm.234565	NM_001033378	ENSMUSG00000074497	A430078G23Rik	-	RIKEN cDNA A430078G23 gene	protein-coding
common_peak1-18143-14-17--0.270708841084668-0.328191099940267	chr8	11260150	11260876	+	0	NA	intron (NM_009931, intron 2 of 51)	intron (NM_009931, intron 2 of 51)	52313	NM_009931	12826	Mm.738	NM_009931	ENSMUSG00000031502	Col4a1	Bru|Col4a-1|Del(8)44H|Raw|Svc	collagen, type IV, alpha 1	protein-coding
common_peak2-20851-11-14--0.398197011356905-0.379391706698377	chr11	69795614	69795992	+	0	NA	intron (NM_026017, intron 1 of 7)	intron (NM_026017, intron 1 of 7)	-1066	NM_018740	54351	Mm.13430	NM_018740	ENSMUSG00000018565	Elp5	Derp6|Rai12	elongator acetyltransferase complex subunit 5	protein-coding
unique_peak2-36075-6-5--0.0195643903408542-0.947717972411649	chr19	54991789	54992096	+	0	NA	Intergenic	L1Md_A|LINE|L1	181995	NM_008149	14732	Mm.210196	NM_008149	ENSMUSG00000024978	Gpam	GPAT|GPAT1	glycerol-3-phosphate acyltransferase, mitochondrial	protein-coding
common_peak1-16828-11-14--0.398197011356905-0.379391706698377	chr6	50384118	50384816	+	0	NA	intron (NM_001163645, intron 1 of 21)	intron (NM_001163645, intron 1 of 21)	21702	NM_001163645	71720	Mm.44153	NM_027881	ENSMUSG00000029822	Osbpl3	1200014M06Rik|6720421I08Rik|A530055M08|ORP3|OSBP3	oxysterol binding protein-like 3	protein-coding
common_peak2-21709-13-14--0.12841856497075-0.301029995663977	chr11	107188667	107189290	+	0	NA	intron (NM_145823, intron 2 of 9)	MTE2b|LTR|MaLR	-138283	NM_001161329	68979	Mm.294617	NM_133702	ENSMUSG00000018433	Nol11	1500002M01Rik|AU015220|AU019874	nucleolar protein 11	protein-coding
common_peak1-9081-72-97-0.0538739687571095-0.328312670805942	chr11	69671190	69672484	+	0	NA	intron (NM_031880, intron 2 of 13)	intron (NM_031880, intron 2 of 13)	395	NM_031880	83813	Mm.28874	NM_031880	ENSMUSG00000001583	Tnk1	Kos1|Tnk1a|Tnk1b	tyrosine kinase, non-receptor, 1	protein-coding
common_peak2-20425-61-137--0.725775127028829-3.20883862849633	chr10	28074184	28076725	+	0	NA	intron (NM_008983, intron 6 of 31)	intron (NM_008983, intron 6 of 31)	280828	NM_008983	19272	Mm.332303	NM_008983	ENSMUSG00000019889	Ptprk	AI853699|PTPk|RPTPkappa	protein tyrosine phosphatase, receptor type, K	protein-coding
unique_peak2-34788-9-11--0.395349094316936-0.344532117358383	chr15	62286387	62287055	+	0	NA	Intergenic	Intergenic	-235715	NR_003523	67552	Mm.484027	NM_026230		H2afy3	4933432H23Rik	H2A histone family, member Y3	pseudo
common_peak2-28629-42-48-0.127619483751976-0.377714458142987	chr5	27790767	27791919	+	0	NA	intron (NM_001136060, intron 4 of 25)	L1M5|LINE|L1	36589	NM_028561	73526	Mm.389608	NM_028561	ENSMUSG00000048703	Speer4b	1700081O22Rik|SPEER-4B	spermatogenesis associated glutamate (E)-rich protein 4b	protein-coding
common_peak1-15813-19-9-1.08075923177432-1.37307999835977	chr5	74284908	74285759	+	0	NA	Intergenic	Intergenic	179103	NM_177561	69727	Mm.48795	NM_177561		Usp46	1190009E20Rik|2410018I08Rik|AI451644	ubiquitin specific peptidase 46	protein-coding
common_peak1-14503-34-20-0.989751104222505-2.03367508793052	chr3	18624434	18625583	+	0	NA	Intergenic	Lx5|LINE|L1	-244531	NR_040544	73959	Mm.60616	NR_040544		4930433B08Rik	-	RIKEN cDNA 4930433B08 gene	ncRNA
common_peak1-14149-13-22--0.745089925419244-0.690311289528838	chr2	132144625	132145256	+	0	NA	Intergenic	L1Md_F2|LINE|L1	33265	NM_001291039	110911	Mm.284503	NM_138651	ENSMUSG00000058793	Cds2	5730450N06Rik|5730460C18Rik|AI854580|D2Wsu127e	CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2	protein-coding
common_peak1-16395-13-18--0.469455482805817-0.409888142029227	chr5	124327454	124328043	+	0	NA	3' UTR (NM_175520, exon 1 of 1)	3' UTR (NM_175520, exon 1 of 1)	2281	NM_175520	243270	Mm.33362	NM_175520	ENSMUSG00000049241	Hcar1	Gpr81	hydrocarboxylic acid receptor 1	protein-coding
unique_peak1-986-10-2-1.77145284428761-2.09384600808989	chr11	68435150	68435578	+	0	NA	Intergenic	Intergenic	34825	NM_177779	276920	Mm.123046	NM_177779	ENSMUSG00000045915	Ccdc42	A530001H01Rik	coiled-coil domain containing 42	protein-coding
unique_peak1-4193-9-2-1.60465090568306-1.87199725847353	chr2	117801185	117801678	+	0	NA	Intergenic	Lx8|LINE|L1	-136227	NM_011580	21825	Mm.4159	NM_011580	ENSMUSG00000040152	Thbs1	TSP-1|TSP1|Thbs-1|tbsp1	thrombospondin 1	protein-coding
common_peak2-27695-7-6--0.00826409175941478-0.97990265578305	chr3	121640574	121640939	+	0	NA	Intergenic	ORR1C1|LTR|MaLR	-15488	NM_172525	214137	Mm.229287	NM_172525	ENSMUSG00000039831	Arhgap29	6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1	Rho GTPase activating protein 29	protein-coding
common_peak2-23568-18-20--0.0793982715504091-0.301029995663976	chr15	79391470	79392147	+	0	NA	TTS (NM_010059)	TTS (NM_010059)	-14637	NM_199080	67040	Mm.29644	NM_152806	ENSMUSG00000055065	Ddx17	2610007K22Rik|A430025E01Rik|AI047725|C80929|Gm926|p72	DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	protein-coding
common_peak2-21739-26-38--0.357503126703786-0.505877949819268	chr11	115535520	115536335	+	0	NA	intron (NM_008163, intron 2 of 5)	intron (NM_008163, intron 2 of 5)	33984	NM_008163	14784	Mm.439649	NM_008163	ENSMUSG00000059923	Grb2	AA408164|Ash	growth factor receptor bound protein 2	protein-coding
unique_peak1-121-9-1-2.18961340640422-2.31132995230379	chr1	60745397	60746101	+	0	NA	Intergenic	L1Md_A|LINE|L1	-57483	NM_007642	12487	Mm.255003	NM_007642	ENSMUSG00000026012	Cd28	-	CD28 antigen	protein-coding
unique_peak1-2077-8-5-0.420259917226415-1.10484139239135	chr15	36867586	36868106	+	0	NA	Intergenic	Intergenic	69311	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
common_peak2-25540-16-24--0.525592547506663-0.561823156887258	chr19	6014611	6015269	+	0	NA	non-coding (NR_045783, exon 3 of 5)	non-coding (NR_045783, exon 3 of 5)	307	NM_007600	12333	Mm.6221	NM_007600	ENSMUSG00000024942	Capn1	Capa-1|Capa1|mu-calpin	calpain 1	protein-coding
common_peak1-17950-39-24-0.971905057144429-2.19832861281706	chr7	127911761	127913044	+	0	NA	intron (NM_177697, intron 8 of 33)	intron (NM_177697, intron 8 of 33)	29331	NM_177697	233813	Mm.389939	NM_177697	ENSMUSG00000030889	Vwa3a	E030013G06Rik	von Willebrand factor A domain containing 3A	protein-coding
common_peak1-13537-135-124-0.791701118378374-5.77469593576908	chr2	173260346	173264863	+	0	NA	Intergenic	B3|SINE|B2	-85489	NM_028158	72221	Mm.46132	NM_028158	ENSMUSG00000027518	1700021F07Rik	-	RIKEN cDNA 1700021F07 gene	protein-coding
unique_peak1-5292-11-1-2.50869358425161-2.83420869758413	chr5	66757872	66758404	+	0	NA	intron (NM_001201413, intron 9 of 16)	Lx7|LINE|L1	-29234	NM_001201416	11787	Mm.5159	NM_009686	ENSMUSG00000029207	Apbb2	2310007D03Rik|FE65L1|Rirl1|TR2L|Zfra	amyloid beta (A4) precursor protein-binding, family B, member 2	protein-coding
common_peak2-30449-14-26--0.855671341805824-0.949797625454538	chr7	45395083	45395778	+	0	NA	Intergenic	Intergenic	1124474	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak2-19719-2-6--1.72480917832092-1.26211192963361	chr1	66817766	66818012	+	0	NA	intron (NM_001122738, intron 5 of 14)	intron (NM_001122738, intron 5 of 14)	46280	NM_177645	68691	Mm.240912	NM_177645	ENSMUSG00000026004	Kansl1l	1110028C15Rik|1190030G24|AI427598|C430010P07Rik|mKIAA4189	KAT8 regulatory NSL complex subunit 1-like	protein-coding
unique_peak1-7407-39-5-3.030798746198-9.32184467415593	chrX	126770636	126771631	+	0	NA	intron (NM_172493, intron 23 of 26)	T-rich|Low_complexity|Low_complexity	486855	NM_172493	54004	Mm.10763	NM_017398	ENSMUSG00000034480	Diap2	Dia3|Diaph2|Drf2|E430022I22Rik	diaphanous homolog 2 (Drosophila)	protein-coding
common_peak1-18497-99-128-0.208130487859397-0.647072872090464	chr8	85554212	85556165	+	0	NA	intron (NM_177378, intron 4 of 6)	MIRc|SINE|MIR	-134063	NM_001111304	71310	Mm.24031	NM_027758	ENSMUSG00000031709	Tbc1d9	4933431N12Rik|AI847101|AW490653|C76116	TBC1 domain family, member 9	protein-coding
unique_peak1-683-9-1-2.18961340640422-2.31132995230379	chr10	77205289	77205811	+	0	NA	intron (NM_001287074, intron 1 of 11)	intron (NM_001287074, intron 1 of 11)	16319	NM_001205033	100502953	Mm.486157	NM_001205033	ENSMUSG00000096421	Gm10100	ENSMUSG00000061452	predicted gene 10100	protein-coding
common_peak1-18969-50-53-0.286052814315484-0.610031908571722	chr9	55148877	55150444	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-18228	NM_032002	83961	Mm.443874	NM_032002	ENSMUSG00000032311	Nrg4	AI552600	neuregulin 4	protein-coding
common_peak2-28443-11-17--0.661231417190699-0.58239619684445	chr4	150008510	150009055	+	0	NA	intron (NM_173774, intron 6 of 8)	intron (NM_173774, intron 6 of 8)	17501	NM_173774	242773	Mm.29280	NM_173774		Slc45a1	C230078B22|Dnb5	solute carrier family 45, member 1	protein-coding
common_peak1-14638-34-21-0.922636908363969-1.85054049304327	chr3	57268102	57269344	+	0	NA	intron (NM_133784, intron 4 of 6)	RLTR16|LTR|ERVK	39391	NM_145539	229302	Mm.26618	NM_145539	ENSMUSG00000027801	Tm4sf4	Iltmp	transmembrane 4 superfamily member 4	protein-coding
common_peak1-8159-14-7-0.899216160357645-0.947446088118041	chr1	193389141	193389759	+	0	NA	intron (NM_029766, intron 5 of 14)	intron (NM_029766, intron 5 of 14)	9963	NM_029766	76843	Mm.189102	NM_029766	ENSMUSG00000037474	Dtl	2810047L02Rik|5730564G15Rik|Ramp	denticleless homolog (Drosophila)	protein-coding
common_peak2-27205-31-46--0.329350180864514-0.513362016391488	chr3	40800056	40800930	+	0	NA	Intergenic	L1MB8|LINE|L1	45940	NM_001040399	214048	Mm.46782	NM_027663	ENSMUSG00000037814	Larp1b	1700108L22Rik|4933421B21Rik|AA690246|Larp2	La ribonucleoprotein domain family, member 1B	protein-coding
common_peak1-18259-28-38--0.232443099040786-0.377553616161376	chr8	34146234	34147346	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-86292	NM_001177589	100042715	Mm.291093	NM_001177589		Gm3985	-	predicted gene 3985	protein-coding
common_peak1-14346-226-305-0.396663082396275-3.25610507704274	chr2	164910630	164912494	+	0	NA	intron (NR_033448, intron 2 of 2)	intron (NR_033448, intron 2 of 2)	4688	NR_033448	72211	Mm.482899	NR_033448	ENSMUSG00000078935	1700025C18Rik	-	RIKEN cDNA 1700025C18 gene	ncRNA
common_peak1-8215-40-78--0.644805065426005-1.53728479856666	chr10	8885448	8886533	+	0	NA	Intergenic	Intergenic	-280122	NM_175155	70097	Mm.338275	NM_175155	ENSMUSG00000015305	Sash1	1100001C18Rik|2500002E12Rik|A330076K04Rik|mKIAA0790	SAM and SH3 domain containing 1	protein-coding
unique_peak2-34194-0-7--3.84013093047421-1.80617997398389	chr13	37941609	37941947	+	0	NA	intron (NM_001039188, intron 1 of 9)	B1_Mur3|SINE|Alu	22516	NM_001039188	68750	Mm.491109	NM_026830	ENSMUSG00000039087	Rreb1	1110037N09Rik|AA414966|B930013M22Rik	ras responsive element binding protein 1	protein-coding
unique_peak2-34824-14-34--1.23006685658732-1.94354392707378	chr15	74996870	74998191	+	0	NA	Intergenic	L1MB5|LINE|L1	-55151	NM_001099217	100041546	Mm.482110	NM_001099217	ENSMUSG00000022584	Ly6c2	Ly-6C.2|Ly-6C2	lymphocyte antigen 6 complex, locus C2	protein-coding
unique_peak2-39742-6-6--0.241956811677302-0.947717972411649	chr9	123528807	123529250	+	0	NA	intron (NM_011731, intron 1 of 10)	L1Md_F2|LINE|L1	12655	NM_011731	22599	Mm.41963	NM_011731	ENSMUSG00000025243	Slc6a20b	AA986306|Sit1|Slc6a20|XT3|Xtrp3	solute carrier family 6 (neurotransmitter transporter), member 20B	protein-coding
common_peak2-29230-25-17-0.691924903902794-0.98872314135509	chr5	138263400	138264034	+	0	NA	3' UTR (NM_001005426, exon 17 of 17)	3' UTR (NM_001005426, exon 17 of 17)	13789	NM_153510	231805	Mm.379385	NM_153510	ENSMUSG00000046245	Pilra	AV021745|FDF03	paired immunoglobin-like type 2 receptor alpha	protein-coding
unique_peak1-1898-7-1-1.79909083029819-1.80617997398389	chr14	65805978	65806342	+	0	NA	Intergenic	MTD|LTR|MaLR	75140	NM_021458	14365	Mm.214687	NM_021458		Fzd3	AU020229|D930050A07Rik|Fz3	frizzled homolog 3 (Drosophila)	protein-coding
unique_peak2-33764-5-5--0.289342836727009-0.909929411522249	chr11	117932086	117932475	+	0	NA	intron (NM_001167746, intron 48 of 80)	ID_B1|SINE|B4	58253	NM_001167746	69926	Mm.473893	NM_001167746	ENSMUSG00000033987	Dnah17	2810003K23Rik|Dnahc17|Dnahcl1|Gm1178|mKIAA3028	dynein, axonemal, heavy chain 17	protein-coding
unique_peak2-33480-7-6--0.00826409175941478-0.97990265578305	chr11	69880659	69881090	+	0	NA	Intergenic	RLTR18B|LTR|ERVK	13017	NM_001291132	11889	Mm.6559	NM_009714	ENSMUSG00000020884	Asgr1	ASGPR1|Asgr|Asgr-1|HL-1	asialoglycoprotein receptor 1	protein-coding
common_peak2-23194-13-16--0.30899081061257-0.330004445983672	chr15	82345976	82346311	+	0	NA	Intergenic	MMTV-int|LTR|ERVK	-39385	NM_201360	380997	Mm.482248	NM_201360	ENSMUSG00000096852	Cyp2d12	9030605E09Rik	cytochrome P450, family 2, subfamily d, polypeptide 12	protein-coding
common_peak1-19280-24-22-0.269647946710704-0.457753417732779	chr9	119052882	119054096	+	0	NA	intron (NM_177117, intron 33 of 36)	intron (NM_177117, intron 33 of 36)	12722	NM_146230	235674	Mm.379402	NM_146230	ENSMUSG00000010651	Acaa1b	-	acetyl-Coenzyme A acyltransferase 1B	protein-coding
common_peak2-27312-24-37--0.454717610675869-0.572500200098104	chr3	65391779	65392815	+	0	NA	Intergenic	Intergenic	-58961	NR_027955	71004	Mm.475465	NM_001033527	ENSMUSG00000074580	4931440P22Rik	-	RIKEN cDNA 4931440P22 gene	ncRNA
common_peak1-11607-17-24--0.425559851569687-0.427564438475253	chr16	17928246	17928857	+	0	NA	promoter-TSS (NM_153150)	promoter-TSS (NM_153150)	-239	NM_153150	13358	Mm.229291	NM_153150	ENSMUSG00000003528	Slc25a1	1300019P08Rik|2610100G11Rik|AI194714|Ctp|Dgsj|Slc20a3	solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1	protein-coding
unique_peak2-36943-9-27--1.61774151565338-2.34622402919155	chr3	104788583	104789434	+	0	NA	Intergenic	Intergenic	-24381	NM_009520	22414	Mm.10740	NM_009520	ENSMUSG00000027840	Wnt2b	Wnt13	wingless-type MMTV integration site family, member 2B	protein-coding
common_peak2-23508-16-28--0.73971735285951-0.890873221665474	chr15	76477224	76477980	+	0	NA	3' UTR (NM_001276321, exon 4 of 4)	3' UTR (NM_001276321, exon 4 of 4)	-7243	NM_183091	72749	Mm.358749	NM_183091	ENSMUSG00000059323	Tonsl	2810439M11Rik|Nfkbil2	tonsoku-like, DNA repair protein	protein-coding
common_peak2-22159-13-31--1.22152796936223-1.73082168901047	chr12	87265852	87266942	+	0	NA	intron (NM_001081423, intron 22 of 33)	intron (NM_001081423, intron 22 of 33)	100497	NM_001081423	320244	Mm.132172	NM_177114	ENSMUSG00000012609	Ttll5	1700048H13Rik|2310009M18Rik|4930556H18Rik|AI428864|D630041K24Rik|R75373|Stamp|mKIAA0998	tubulin tyrosine ligase-like family, member 5	protein-coding
unique_peak2-39241-3-6--1.22133801201688-1.08602067057793	chr8	111818509	111818896	+	0	NA	Intergenic	L1Md_F3|LINE|L1	46106	NR_002928	384864	Mm.390083	NR_002928		Gm1943	-	WD repeat domain 70 pseudogene	pseudo
unique_peak1-1583-31-3-3.22523867081312-7.71465772374253	chr13	33025809	33027209	+	0	NA	Intergenic	Intergenic	-30873	NM_011454	20708	Mm.36526	NM_011454	ENSMUSG00000042842	Serpinb6b	NK13|Spi12|ovalbumin	serine (or cysteine) peptidase inhibitor, clade B, member 6b	protein-coding
unique_peak2-33724-8-6-0.197867495889966-1.03789460276074	chr11	115074958	115075379	+	0	NA	intron (NM_001033393, intron 8 of 9)	intron (NM_001033393, intron 8 of 9)	26367	NM_001033393	320534	Mm.260587	NM_001033393	ENSMUSG00000045980	Tmem104	C630005D06Rik|mFLJ00021	transmembrane protein 104	protein-coding
unique_peak2-38176-5-9--1.02630843089322-1.21398586181642	chr6	90983716	90984210	+	0	NA	intron (NM_018815, intron 28 of 39)	(GGA)n|Simple_repeat|Simple_repeat	82857	NM_018815	54563	Mm.28162	NM_018815	ENSMUSG00000030091	Nup210	9830001L10|AI836801|Pom210|gp190|gp210	nucleoporin 210	protein-coding
unique_peak2-34419-4-6--0.830815435910851-0.989110657569874	chr14	18028313	18028740	+	0	NA	Intergenic	RLTR16|LTR|ERVK	-113681	NM_001289761	218772	Mm.259318	NM_011243	ENSMUSG00000017491	Rarb	A830025K23|Hap|Nr1b2	retinoic acid receptor, beta	protein-coding
unique_peak1-5459-10-1-2.35641534500877-2.57096726280955	chr5	122770647	122771153	+	0	NA	3' UTR (NM_177242, exon 6 of 6)	3' UTR (NM_177242, exon 6 of 6)	33304	NM_144912	231724	Mm.255587	NM_144912	ENSMUSG00000038569	Rad9b	A630082N15Rik|BC021784	RAD9 homolog B	protein-coding
common_peak2-23551-15-11-0.4272022498345-0.503257505534083	chr15	79051197	79051760	+	0	NA	Intergenic	B3|SINE|B2	-8125	NM_008837	18693	Mm.259464	NM_008837	ENSMUSG00000068206	Pick1	Prkcabp	protein interacting with C kinase 1	protein-coding
unique_peak1-6443-9-2-1.60465090568306-1.87199725847353	chr7	99130965	99131492	+	0	NA	intron (NM_011807, intron 9 of 22)	intron (NM_011807, intron 9 of 22)	-79676	NM_001243046	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
common_peak2-20954-37-38-0.24059085262357-0.466726531031556	chr11	17159344	17160424	+	0	NA	intron (NM_020558, intron 1 of 4)	intron (NM_020558, intron 1 of 4)	2263	NM_020558	57316	Mm.287982	NM_020558	ENSMUSG00000000581	C1d	1110036E10Rik|AI875855|SUN-CoR	C1D nuclear receptor co-repressor	protein-coding
unique_peak1-6981-10-3-1.35641534500877-1.75805390616669	chr8	119806667	119807222	+	0	NA	intron (NM_001163262, intron 1 of 20)	intron (NM_001163262, intron 1 of 20)	26025	NM_001163262	74440	Mm.233181	NM_028941	ENSMUSG00000034390	Cmip	4933407C03Rik|5830471E12Rik|AI314065|AI464126	c-Maf inducing protein	protein-coding
common_peak1-13846-39-26-0.860873744755685-1.85759988472351	chr2	60877207	60878910	+	0	NA	Intergenic	L1Md_T|LINE|L1	-64850	NR_045335	100038493	Mm.388076	NR_045335	ENSMUSG00000075325	Gm13582	ENSMUSG00000075325|OTTMUSG00000012844	predicted gene 13582	ncRNA
common_peak1-11001-8-8--0.164702583494742-1.00793137938329	chr15	36836771	36837291	+	0	NA	Intergenic	Intergenic	100126	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
common_peak2-29468-18-39--1.00900894365901-1.65365064026544	chr6	30173070	30174153	+	0	NA	intron (NM_001169576, intron 3 of 4)	intron (NM_001169576, intron 3 of 4)	20192	NM_001169577	22214	Mm.332967	NM_009459	ENSMUSG00000039159	Ube2h	1500009C23Rik|AI181839|AI326965|AI462483|AW227540|E2-20K|Gid3|N28148|Ubc8	ubiquitin-conjugating enzyme E2H	protein-coding
common_peak1-16898-41-13-1.89379378279106-5.74204898103558	chr6	72295693	72296942	+	0	NA	promoter-TSS (NM_026696)	promoter-TSS (NM_026696)	-994	NM_026696	68364	Mm.52711	NM_026696	ENSMUSG00000058706	0610030E20Rik	1500031N04Rik|2810411C16Rik|AI461894	RIKEN cDNA 0610030E20 gene	protein-coding
common_peak1-7694-15-4-1.69023665566829-1.97518968347063	chr1	82815231	82815959	+	0	NA	Intergenic	Intergenic	-20463	NM_010472	15463	Mm.392569	NM_010472	ENSMUSG00000026159	Agfg1	AU045498|C130049H11Rik|C85612|D730048C23Rik|Hrb|RAB|Rip	ArfGAP with FG repeats 1	protein-coding
unique_peak1-953-7-2-1.21412832957703-1.45399745587252	chr11	59657596	59658139	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	-3708	NM_134029	103850	Mm.41761	NM_134029	ENSMUSG00000032615	Nt5m	2010013E09Rik|AI846937|dNT-2	5',3'-nucleotidase, mitochondrial	protein-coding
unique_peak1-7032-8-0-3.00522241794757-2.70926996097583	chr8	126784738	126785213	+	0	NA	intron (NM_139272, intron 1 of 15)	B4A|SINE|B4	29681	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
unique_peak2-35179-3-10--1.87341470859657-1.75805390616669	chr16	49923192	49923751	+	0	NA	Intergenic	Intergenic	-57102	NR_045001	628951	Mm.428032	NR_045001		Gm6936	-	predicted gene 6936	ncRNA
common_peak1-16635-15-15-0.0121647505556561-0.30803596071496	chr6	47595301	47596002	+	0	NA	Intergenic	RSINE1|SINE|B4	9442	NR_002841	19799		NR_002841		Rn4.5s	-	4.5S RNA	rRNA
unique_peak1-442-17-3-2.21829633820504-3.11807310444576	chr1	165769485	165770220	+	0	NA	intron (NM_010629, intron 10 of 20)	intron (NM_010629, intron 10 of 20)	60042	NM_010629	16579	Mm.4651	NM_010629	ENSMUSG00000026585	Kifap3	KAP3|SMAP	kinesin-associated protein 3	protein-coding
common_peak1-12147-6-6--0.241956811677302-0.947717972411649	chr17	28013676	28014152	+	0	NA	intron (NM_001080769, intron 3 of 20)	intron (NM_001080769, intron 3 of 20)	20462	NM_001080769	224648	Mm.291291	NM_001080769	ENSMUSG00000039512	Uhrf1bp1	1110020K19Rik|AA408674|F830021D11Rik|mKIAA4127	UHRF1 (ICBP90) binding protein 1	protein-coding
unique_peak1-1489-10-2-1.77145284428761-2.09384600808989	chr12	119671785	119672427	+	0	NA	Intergenic	Intergenic	96560	NR_045947	100384890	Mm.484658	NR_045947		D230030E09Rik	Npe	Riken cDNA D230030E09 gene	ncRNA
common_peak2-25213-13-12-0.0780323124966764-0.334470287753051	chr18	60952017	60952501	+	0	NA	Intergenic	Intergenic	-11244	NM_001042605	16149	Mm.439737	NM_010545	ENSMUSG00000024610	Cd74	CLIP|DHLAG|HLADG|Ia-GAMMA|Ii	CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)	protein-coding
unique_peak1-733-12-4-1.32684789020028-2.04196296489515	chr10	96870354	96870988	+	0	NA	Intergenic	MTC|LTR|MaLR	-15441	NR_039547	100628616		NR_039547		Mir3966	mmu-mir-3966|mu-mir-3966	microRNA 3966	ncRNA
unique_peak1-3123-20-11-0.903112283870037-1.11267835143409	chr18	35295461	35296578	+	0	NA	intron (NM_009818, intron 1 of 17)	intron (NM_009818, intron 1 of 17)	17453	NM_009818	12385	Mm.18962	NM_009818	ENSMUSG00000037815	Ctnna1	2010010M04Rik|AA517462|AI988031|Catna1	catenin (cadherin associated protein), alpha 1	protein-coding
common_peak2-26724-30-20-0.777357986713112-1.30767018140166	chr2	131160169	131160760	+	0	NA	intron (NM_178607, intron 1 of 5)	intron (NM_178607, intron 1 of 5)	18164	NM_178607	51902	Mm.477523	NM_178607	ENSMUSG00000048911	Rnf24	2810473M14Rik|4930505A13Rik|AI317164|C86507|D2Ertd504e	ring finger protein 24	protein-coding
unique_peak1-6503-13-0-3.77847203063777-4.51544993495972	chr7	115864431	115865026	+	0	NA	Intergenic	L1VL2|LINE|L1	7859	NM_146724	258719	Mm.377653	NM_146724	ENSMUSG00000056946	Olfr512	MOR268-3	olfactory receptor 512	protein-coding
common_peak2-19802-6-6--0.241956811677302-0.947717972411649	chr1	87901418	87901816	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-16900	NM_001122732	70060	Mm.196313	NM_027029	ENSMUSG00000026226	Spata3	1700011N12Rik|1700029H01Rik|4930424D10Rik|Mtsarg1|Tsarg1	spermatogenesis associated 3	protein-coding
unique_peak1-6776-16-3-2.11826364226806-2.65002542325363	chr8	62100308	62100974	+	0	NA	Intergenic	L1Md_A|LINE|L1	710089	NM_173411	234290	Mm.39244	NM_173411	ENSMUSG00000049946	BC030500	-	cDNA sequence BC030500	protein-coding
unique_peak1-3473-12-0-3.64877598508764-4.21441993929574	chr19	10113554	10114127	+	0	NA	Intergenic	Intergenic	-2198	NM_021890	60527	Mm.253875	NM_021890	ENSMUSG00000024664	Fads3	AI464531	fatty acid desaturase 3	protein-coding
common_peak2-20178-19-18-0.154759813218101-0.351190433797598	chr1	171477895	171478711	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-16708	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
unique_peak1-2305-27-11-1.40658345017408-2.62629506227042	chr15	81137273	81138591	+	0	NA	Intergenic	Intergenic	53263	NM_011399	20524	Mm.222536	NM_011399	ENSMUSG00000022404	Slc25a17	34kDa|47kDa|PMP34|Pmp47	solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17	protein-coding
common_peak2-20860-48-43-0.511495532597517-1.12538602347823	chr11	88047458	88048821	+	0	NA	Intergenic	Intergenic	30249	NM_001291271	64656	Mm.168680	NM_024174	ENSMUSG00000023723	Mrps23	D11Bwg1153e|MRP-S23|Rpms23|S23mt	mitochondrial ribosomal protein S23	protein-coding
unique_peak1-1672-11-1-2.50869358425161-2.83420869758413	chr13	69488037	69488700	+	0	NA	Intergenic	Intergenic	184374	NM_198600	210106	Mm.315959	NM_198600	ENSMUSG00000034575	Papd7	LAK-1|POLK|Pols|TRF4|TRF4-1	PAP associated domain containing 7	protein-coding
unique_peak1-2101-24-16-0.705747061517378-1.02077663956384	chr15	37899527	37900490	+	0	NA	intron (NM_001081359, intron 58 of 58)	intron (NM_001081359, intron 58 of 58)	-9198	NM_199476	382985	Mm.24738	NM_199476	ENSMUSG00000022292	Rrm2b	p53R2	ribonucleotide reductase M2 B (TP53 inducible)	protein-coding
unique_peak2-38634-7-13--1.00826409175941-0.697979855752659	chr7	82422789	82423618	+	0	NA	intron (NM_153579, intron 1 of 12)	intron (NM_153579, intron 1 of 12)	30069	NM_001109753	64176	Mm.273082	NM_153579	ENSMUSG00000053025	Sv2b	A830038F04Rik|AI850768|mKIAA0735	synaptic vesicle glycoprotein 2 b	protein-coding
common_peak2-25114-17-24--0.425559851569687-0.427564438475253	chr18	37934864	37935426	+	0	NA	intron (NM_033595, intron 1 of 3)	intron (NM_033595, intron 1 of 3)	9911	NM_033595	93724	Mm.247203	NM_033595	ENSMUSG00000023036	Pcdhga12	Pcdh13|pc2c	protocadherin gamma subfamily A, 12	protein-coding
common_peak2-29768-9-6-0.382258484346616-1.11707584880836	chr6	87511441	87511763	+	0	NA	Intergenic	L1M5|LINE|L1	-28349	NM_001286610	232201	Mm.119564	NM_175476		Arhgap25	A130039I20Rik	Rho GTPase activating protein 25	protein-coding
common_peak1-15053-35-16-1.34390741721217-3.08659436536937	chr3	122729477	122730744	+	0	NA	intron (NM_021503, intron 2 of 5)	B1F|SINE|Alu	7795	NM_021503	59006	Mm.141157	NM_021503	ENSMUSG00000028116	Myoz2	1110012I24Rik|Fatz-2|Myozl2	myozenin 2	protein-coding
common_peak1-8464-12-12--0.0516637330534535-0.309718203022949	chr10	80073658	80074228	+	0	NA	intron (NM_019575, intron 5 of 6)	intron (NM_019575, intron 5 of 6)	1938	NR_105877	102465550		NR_105877		Mir6912	mmu-mir-6912	microRNA mir-6912	ncRNA
common_peak1-16938-28-43--0.406472498815835-0.587580258678924	chr6	83325764	83326523	+	0	NA	intron (NM_183138, intron 6 of 10)	intron (NM_183138, intron 6 of 10)	24953	NR_105793	102465194		NR_105793		Mir6374	mmu-mir-6374	microRNA mir-6374	ncRNA
common_peak1-13264-27-17-0.821620949452924-1.31432283146954	chr19	34607019	34608086	+	0	NA	Intergenic	RMER13B|LTR|ERVK	-5588	NM_021460	16889	Mm.157545	NM_021460	ENSMUSG00000024781	Lipa	AA960673|Lal|Lip-1|Lip1	lysosomal acid lipase A	protein-coding
unique_peak1-4732-11-1-2.50869358425161-2.83420869758413	chr3	107697578	107698090	+	0	NA	promoter-TSS (NM_010360)	promoter-TSS (NM_010360)	-938	NM_010360	14866	Mm.282351	NM_010360	ENSMUSG00000004032	Gstm5	-	glutathione S-transferase, mu 5	protein-coding
common_peak1-19226-14-39--1.42271193452972-2.70027529094734	chr9	107612232	107612962	+	0	NA	intron (NM_011349, intron 1 of 17)	intron (NM_011349, intron 1 of 17)	209	NM_011349	20350	Mm.12903	NM_011349	ENSMUSG00000034684	Sema3f	Sema4|Semak	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F	protein-coding
unique_peak1-7010-8-7-0.00522241794757061-1.00793137938329	chr8	123711808	123712311	+	0	NA	Intergenic	(A)n|Simple_repeat|Simple_repeat	60474	NM_008024	14241	Mm.5111	NM_008024	ENSMUSG00000097084	Foxl1	FREAC7|Fkh6|fkh-6	forkhead box L1	protein-coding
common_peak1-12193-8-21--1.45420920068973-1.61268301619756	chr17	32320420	32320940	+	0	NA	TTS (NM_001033163)	TTS (NM_001033163)	5728	NM_001033163	71932	Mm.176240	NM_001033163	ENSMUSG00000037577	Ephx3	2310063B19Rik|Abhd9	epoxide hydrolase 3	protein-coding
common_peak2-21596-15-32--1.0322293688028-1.48160942223867	chr11	98935866	98937068	+	0	NA	exon (NM_172564, exon 6 of 13)	exon (NM_172564, exon 6 of 13)	14153	NM_172564	217169	Mm.262067	NM_172564	ENSMUSG00000017607	Tns4	9930017A07Rik|AA589547|AU016405|Cten	tensin 4	protein-coding
unique_peak1-5287-15-3-2.01216475055566-3.03427613622886	chr5	66200092	66200662	+	0	NA	intron (NM_001024917, intron 11 of 19)	intron (NM_001024917, intron 11 of 19)	45617	NM_001024917	333789	Mm.332398	NM_001024917	ENSMUSG00000037795	N4bp2	B3bp|E430014I16|Gm1791|Gm868	NEDD4 binding protein 2	protein-coding
unique_peak2-38098-6-10--0.894033508256995-1.21398586181642	chr6	66944299	66944692	+	0	NA	intron (NM_001177560, intron 3 of 4)	intron (NM_001177560, intron 3 of 4)	-42098	NR_040278	320172	Mm.449039	NR_040278	ENSMUSG00000087231	E230016M11Rik	-	RIKEN cDNA E230016M11 gene	ncRNA
unique_peak2-33090-8-18--1.24270509549601-1.15812782348128	chr10	80172812	80173444	+	0	NA	intron (NM_007460, intron 25 of 30)	intron (NM_007460, intron 25 of 30)	7690	NM_027829	71564	Mm.35802	NM_027829	ENSMUSG00000055862	Izumo4	9030607L17Rik|AI550407	IZUMO family member 4	protein-coding
unique_peak1-4774-10-0-3.35641534500877-3.31132995230379	chr3	123566569	123567098	+	0	NA	Intergenic	(TCTA)n|Simple_repeat|Simple_repeat	-173063	NR_121616	83398	Mm.443908	NM_031186	ENSMUSG00000027977	Ndst3	4921531K01Rik|4930511P15Rik|N-HSST 3|NDST-3	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	protein-coding
common_peak2-26167-27-16-0.904083109644897-1.48160942223867	chr2	19371363	19371885	+	0	NA	Intergenic	Intergenic	4334	NM_018809	19213	Mm.69647	NM_018809	ENSMUSG00000026735	Ptf1a	PTF1-p48|PTF1p48|bHLHa29	pancreas specific transcription factor, 1a	protein-coding
common_peak1-17148-91-83-0.681114522823577-3.02059385864801	chr6	117878661	117881102	+	0	NA	Intergenic	PB1D7|SINE|Alu	7472	NM_033648	108017	Mm.250392	NM_033648		Fxyd4	0610008I02Rik|AI267073|Chif	FXYD domain-containing ion transport regulator 4	protein-coding
common_peak2-19788-76-51-1.06150466772219-4.97219933347577	chr1	86433872	86435131	+	0	NA	Intergenic	Intergenic	1060884	NM_030194	109032	Mm.335802	NM_030194	ENSMUSG00000070034	Sp110	5031415C07Rik|52kDa|5830484A20Rik|ENSMUSG00000075603|Ifi75|Ipr1	Sp110 nuclear body protein	protein-coding
common_peak1-13759-11-25--1.19174613388948-1.51503956548638	chr2	34771248	34771800	+	0	NA	Intergenic	Intergenic	-2028	NM_028716	74016	Mm.65691	NM_028716	ENSMUSG00000026873	Phf19	3110009G19Rik|3321402G02Rik	PHD finger protein 19	protein-coding
common_peak2-26078-24-25-0.0927701846266249-0.337923771396236	chr2	130629292	130630012	+	0	NA	non-coding (NR_024097, exon 1 of 1)	non-coding (NR_024097, exon 1 of 1)	185	NR_024097	100043766	Mm.447040	NR_024097		Gm14057	OTTMUSG00000015563	Ppp1r14c pseudogene	pseudo
unique_peak2-38383-9-10--0.269818212233077-1.05503135781948	chr7	16536741	16537332	+	0	NA	intron (NM_153068, intron 5 of 5)	B3|SINE|B2	-5579	NM_133831	68077	Mm.277634	NM_133831	ENSMUSG00000041560	Gltscr2	5330430H08Rik|9430097C02Rik|AU041936|AW536441|PICT-1|R74911	glioma tumor suppressor candidate region gene 2	protein-coding
unique_peak2-38478-8-19--1.31670567693979-1.30305656033811	chr7	30553152	30553930	+	0	NA	promoter-TSS (NM_023750)	promoter-TSS (NM_023750)	-30	NM_023750	74352	Mm.251083	NM_023750		Zfp84	2210410P13Rik|4633401C23Rik|AI415447|BB081605|C86188|KRAB18|Zfp69	zinc finger protein 84	protein-coding
unique_peak2-33827-1-6--2.43441193227435-1.56314192529759	chr12	8673656	8674042	+	0	NA	Intergenic	B2_Mm1a|SINE|B2	-7091	NM_001160221	80913	Mm.341243	NM_030723	ENSMUSG00000020594	Pum2	5730503J23Rik|Pumm2|mKIAA0235	pumilio RNA-binding family member 2	protein-coding
common_peak2-20841-28-34--0.0763238971235038-0.304271119602326	chr11	49086450	49087571	+	0	NA	Intergenic	Intergenic	-6642	NM_146471	258463	Mm.377517	NM_146471	ENSMUSG00000059864	Olfr1393	MOR256-24	olfactory receptor 1393	protein-coding
common_peak2-24306-14-21--0.560215458279653-0.519193887192484	chr17	33718107	33718823	+	0	NA	intron (NM_053214, intron 8 of 27)	B1_Mus2|SINE|Alu	25813	NM_053214	17916	Mm.42019	NM_053214	ENSMUSG00000024300	Myo1f	C330006B10Rik	myosin IF	protein-coding
common_peak1-15887-75-165--0.635972439603639-3.0073619265767	chr5	9160863	9162601	+	0	NA	promoter-TSS (NM_011806)	promoter-TSS (NM_011806)	44	NM_001110327	23857	Mm.22480	NM_011806	ENSMUSG00000042508	Dmtf1	Dimp|Dmp1	cyclin D binding myb-like transcription factor 1	protein-coding
unique_peak2-38689-8-10--0.454209200689727-1.078512453669	chr7	101836506	101836991	+	0	NA	Intergenic	Intergenic	-1522399	NM_011858	23966	Mm.254610	NM_011858	ENSMUSG00000048078	Tenm4	Doc4|ELM2|Odz4|R75022|Ten-m4|l(7)-3Rn|l7Rn3|mKIAA1302	teneurin transmembrane protein 4	protein-coding
unique_peak2-38177-6-12--1.13504160776079-1.45089835786865	chr6	91212424	91213007	+	0	NA	intron (NM_007992, intron 9 of 17)	intron (NM_007992, intron 9 of 17)	49957	NM_007992	14115	Mm.249146	NM_007992	ENSMUSG00000064080	Fbln2	5730577E14Rik|FIBL-2	fibulin 2	protein-coding
common_peak1-18768-31-31-0.225238670813123-0.416139936131877	chr8	126832017	126833216	+	0	NA	intron (NM_139272, intron 3 of 15)	intron (NM_139272, intron 3 of 15)	77322	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
common_peak2-26127-12-22--0.874785970969374-0.809260849721102	chr2	6380030	6380783	+	0	NA	Intergenic	Intergenic	106624	NM_181399	98910	Mm.40673	NM_181399	ENSMUSG00000039046	Usp6nl	AI316785|RNTRE|TRE2NL|mKIAA0019	USP6 N-terminal like	protein-coding
common_peak2-24237-41-46-0.146559853171023-0.380848279231604	chr16	90220607	90221749	+	0	NA	intron (NM_011434, intron 1 of 4)	CpG	191	NM_011434	20655	Mm.276325	NM_011434	ENSMUSG00000022982	Sod1	B430204E11Rik|Cu/Zn-SOD|CuZnSOD|Ipo-1|Ipo1|SODC|Sod-1	superoxide dismutase 1, soluble	protein-coding
unique_peak1-1169-8-1-2.00522241794757-2.05605744720049	chr11	99491215	99491749	+	0	NA	Intergenic	Intergenic	-1929	NM_001048196	665891	Mm.394141	NM_001048196	ENSMUSG00000063251	Krtap4-1	A030010K20Rik	keratin associated protein 4-1	protein-coding
common_peak2-23036-10-10--0.103016273628528-0.301029995663987	chr14	67715345	67715779	+	0	NA	Intergenic	Intergenic	-24254	NM_001205188	71978	Mm.273997	NM_028032	ENSMUSG00000022052	Ppp2r2a	2410004D02Rik|mKIAA1541	protein phosphatase 2, regulatory subunit B, alpha	protein-coding
common_peak1-13391-92-99-0.44849589392804-1.57130714634859	chr19	46984496	46986265	+	0	NA	intron (NR_028353, intron 3 of 18)	intron (NR_028353, intron 3 of 18)	51461	NM_029810	76952	Mm.40965	NM_029810	ENSMUSG00000025041	Nt5c2	2010002I23Rik|CnII|ENSMUSG00000025039|Gm9751|Gmp|Nt5b|Pnt5|cN-II	5'-nucleotidase, cytosolic II	protein-coding
common_peak1-15542-52-78--0.195520757911404-0.420757421015467	chr4	119539017	119540289	+	0	NA	intron (NM_010657, intron 1 of 8)	ORR1D2|LTR|MaLR	52370	NM_010657	16656	Mm.302758	NM_010657	ENSMUSG00000028634	Hivep3	2900056N03Rik|A130075N07|AI848000|E030045D18Rik|KBP-1|KBP1|Krc|Rc|Schnurri-3|Shn3|Zas3	human immunodeficiency virus type I enhancer binding protein 3	protein-coding
common_peak2-29945-17-12-0.517856620063946-0.647240723060192	chr6	116635829	116636455	+	0	NA	Intergenic	MERVL-int|LTR|ERVL	-12288	NM_178045	213391	Mm.257931	NM_178045	ENSMUSG00000042129	Rassf4	3830411C14Rik|AD037|AI586137	Ras association (RalGDS/AF-6) domain family member 4	protein-coding
unique_peak2-36053-0-6--3.64748585253182-1.56314192529759	chr19	46718771	46719202	+	0	NA	intron (NM_001177812, intron 3 of 4)	intron (NM_001177812, intron 3 of 4)	21095	NM_001177813	226178	Mm.329895	NM_146099	ENSMUSG00000047731	Wbp1l	D19Wsu162e|Opal1	WW domain binding protein 1 like	protein-coding
unique_peak2-40006-15-46--1.54242410112198-3.58938495778629	chrY	90783573	90784849	+	0	NA	Intergenic	Intergenic	88396953	NM_001270512	100041505	Mm.491824	NM_001270512		Gm3376	Rbmy1b	predicted gene 3376	protein-coding
unique_peak1-5388-9-3-1.18961340640422-1.57096726280955	chr5	100798733	100799263	+	0	NA	intron (NM_026969, intron 22 of 27)	intron (NM_026969, intron 22 of 27)	46255	NM_026969	69162	Mm.18634	NM_026969	ENSMUSG00000035325	Sec31a	1810024J13Rik|ABP125|ABP130|AU042160|HSPC275|Sec31l1	Sec31 homolog A (S. cerevisiae)	protein-coding
unique_peak1-6742-12-4-1.32684789020028-2.04196296489515	chr8	46742837	46743437	+	0	NA	intron (NM_172752, intron 1 of 22)	MTD|LTR|MaLR	149995	NM_001205219	234214	Mm.211096	NM_172752	ENSMUSG00000031626	Sorbs2	2010203O03Rik|9430041O17Rik|A530071H08|Argbp2|mKIAA0777	sorbin and SH3 domain containing 2	protein-coding
common_peak2-28206-55-21-1.7451882525154-7.10488953080622	chr4	117189303	117190141	+	0	NA	Intergenic	MIR|SINE|MIR	-20202	NM_025739	66743	Mm.318331	NM_025739	ENSMUSG00000028677	Rnf220	4732477A13|4931406I20Rik|5730503K05Rik|AV302541	ring finger protein 220	protein-coding
common_peak1-14103-25-14-0.954959309736587-1.46151065785802	chr2	126350592	126351768	+	0	NA	Intergenic	Lx9|LINE|L1	-27580	NM_011978	26458	Mm.290044	NM_011978		Slc27a2	ACSVL1|FATP2|VLCS|Vlac|Vlacs	solute carrier family 27 (fatty acid transporter), member 2	protein-coding
unique_peak2-34157-5-6--0.511735258063458-0.947717972411649	chr13	28918335	28918739	+	0	NA	intron (NR_045053, intron 2 of 8)	B3A|SINE|B2	58754	NR_045054	72518	Mm.37454	NR_045053		2610307P16Rik	AI666457	RIKEN cDNA 2610307P16 gene	ncRNA
common_peak1-16554-16-16-0.0308008010177225-0.307611222530525	chr5	145083739	145084448	+	0	NA	intron (NM_025833, intron 2 of 13)	intron (NM_025833, intron 2 of 13)	-34699	NR_102374	100579137		NR_102372		Dmr	-	Dmrt1 related	ncRNA
common_peak2-20400-49-41-0.613966400246423-1.40395959851644	chr10	22306003	22307415	+	0	NA	Intergenic	MTD|LTR|MaLR	-58108	NM_178934	353169	Mm.473705	NM_178934	ENSMUSG00000037490	Slc2a12	GLUT-12|Glut12	solute carrier family 2 (facilitated glucose transporter), member 12	protein-coding
common_peak2-27838-53-57-0.282992017288357-0.634202858112803	chr3	152119094	152120845	+	0	NA	intron (NM_001287139, intron 12 of 13)	B1_Mus1|SINE|Alu	60321	NM_001287139	108946	Mm.379292	NM_198416	ENSMUSG00000039068	Zzz3	3110065C23Rik|6430567E01Rik|AA408566|AI481057|AW556059|R75514	zinc finger, ZZ domain containing 3	protein-coding
unique_peak2-37000-6-8--0.60452689106201-1.03789460276074	chr3	121686117	121686612	+	0	NA	intron (NM_172525, intron 3 of 22)	intron (NM_172525, intron 3 of 22)	30120	NM_172525	214137	Mm.229287	NM_172525	ENSMUSG00000039831	Arhgap29	6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1	Rho GTPase activating protein 29	protein-coding
common_peak2-20266-8-15--0.994777582052429-0.771068449301683	chr1	189728312	189728983	+	0	NA	intron (NM_001243792, intron 2 of 7)	intron (NM_001243792, intron 2 of 7)	-93059	NM_011935	26381	Mm.89989	NM_011935	ENSMUSG00000026610	Esrrg	ERR3|Errg|NR3B3|mKIAA0832	estrogen-related receptor gamma	protein-coding
unique_peak1-4731-7-0-2.79909083029819-2.40823996531185	chr3	107260951	107261407	+	0	NA	exon (NM_145922, exon 1 of 4)	exon (NM_145922, exon 1 of 4)	637	NM_145922	99738	Mm.101976	NM_145922	ENSMUSG00000027895	Kcnc4	AI850292|KSHIIIC|Kcr2-4|Kv3.4	potassium voltage gated channel, Shaw-related subfamily, member 4	protein-coding
common_peak2-23747-10-7-0.356415345008769-1.12966497611638	chr15	97786895	97787227	+	0	NA	Intergenic	Intergenic	-7599	NM_201359	380967	Mm.196630	NM_201359	ENSMUSG00000052369	Tmem106c	AI046681|BC046621|D15Ertd405e	transmembrane protein 106C	protein-coding
common_peak2-23303-19-30--0.551508983725189-0.647723624534446	chr15	35937322	35938210	+	0	NA	Intergenic	RMER19C|LTR|ERVK	-69765	NM_053071	12864	Mm.548	NM_053071	ENSMUSG00000014313	Cox6c	-	cytochrome c oxidase subunit VIc	protein-coding
unique_peak2-33555-7-7--0.200909169701811-0.97990265578305	chr11	80784093	80784522	+	0	NA	intron (NM_001034013, intron 2 of 9)	MLT1D|LTR|MaLR	112416	NM_029367	75622	Mm.26988	NM_029367	ENSMUSG00000053184	Spaca3	1700025M08Rik|ALLP17|Lyc3|SLLP1|mSLLP1	sperm acrosome associated 3	protein-coding
common_peak1-14809-9-20--1.20270401637454-1.23014042908325	chr3	90292372	90292889	+	0	NA	TTS (NM_026374)	TTS (NM_026374)	2305	NM_133854	20615	Mm.331182	NM_133854	ENSMUSG00000001018	Snapin	25kDa|AA407989|AV026596|Bloc1s7|Snap25bp|Snapap	SNAP-associated protein	protein-coding
unique_peak2-39151-3-10--1.87341470859657-1.75805390616669	chr8	88137818	88138190	+	0	NA	Intergenic	B3|SINE|B2	-58834	NM_019794	56445	Mm.475573	NM_019794	ENSMUSG00000031701	Dnaja2	1500017M13Rik|2010206B19Rik|DNAJ|DNJ3|Dnaj3|HIRIP4|PRO3015|mDj3	DnaJ (Hsp40) homolog, subfamily A, member 2	protein-coding
common_peak1-14207-10-12--0.344024373132323-0.340565874754526	chr2	150136210	150136740	+	0	NA	TTS (NM_027017)	TTS (NM_027017)	52026	NM_027017	69277	Mm.272470	NM_027017	ENSMUSG00000063364	3300002I08Rik	2900016H11Rik	RIKEN cDNA 3300002I08 gene	protein-coding
unique_peak1-3247-10-5-0.771452844287613-1.33892459842472	chr18	64439149	64439641	+	0	NA	Intergenic	Intergenic	-2561	NR_045366	73588	Mm.65475	NR_045366	ENSMUSG00000086128	St8sia3os	1700091E21Rik	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3, opposite strand	ncRNA
common_peak2-26652-38-50--0.100972682672965-0.309893763698769	chr2	120608742	120609966	+	0	NA	intron (NM_001024856, intron 7 of 15)	intron (NM_001024856, intron 7 of 15)	-52101	NM_026891	68968	Mm.2289	NM_026891	ENSMUSG00000027284	Cdan1	1500015A01Rik|AI448026|AW492297|CDA-I|CDA1|CDAI	congenital dyserythropoietic anemia, type I (human)	protein-coding
common_peak1-8271-10-7-0.356415345008769-1.12966497611638	chr10	24638672	24639224	+	0	NA	intron (NM_007482, intron 3 of 7)	intron (NM_007482, intron 3 of 7)	8328	NM_007482	11846	Mm.154144	NM_007482	ENSMUSG00000019987	Arg1	AI|AI256583|Arg-1|PGIF	arginase, liver	protein-coding
common_peak2-25939-76-90-0.254149745664585-0.695551052331828	chr19	46984522	46985559	+	0	NA	intron (NR_028353, intron 3 of 18)	intron (NR_028353, intron 3 of 18)	51801	NM_029810	76952	Mm.40965	NM_029810	ENSMUSG00000025041	Nt5c2	2010002I23Rik|CnII|ENSMUSG00000025039|Gm9751|Gmp|Nt5b|Pnt5|cN-II	5'-nucleotidase, cytosolic II	protein-coding
common_peak2-24020-18-16-0.225456309978012-0.397739447719379	chr16	22201880	22202556	+	0	NA	Intergenic	Intergenic	-38846	NM_183029	319765	Mm.489442	NM_183029	ENSMUSG00000033581	Igf2bp2	C330012H03Rik|IMP-2|Imp2|Neilsen	insulin-like growth factor 2 mRNA binding protein 2	protein-coding
common_peak1-13321-14-10-0.439784541720347-0.519648556297791	chr19	42613494	42614092	+	0	NA	intron (NM_177464, intron 1 of 6)	intron (NM_177464, intron 1 of 6)	20498	NM_177464	52013	Mm.254169	NM_177464	ENSMUSG00000025184	R3hcc1l	1700036B12Rik|AI450607|C10orf28|D19Ertd386e|GIDRP86|Gidrp88	R3H domain and coiled-coil containing 1 like	protein-coding
unique_peak1-2989-10-2-1.77145284428761-2.09384600808989	chr17	79819813	79820444	+	0	NA	Intergenic	AT_rich|Low_complexity|Low_complexity	57097	NR_033463	74622	Mm.311921	NR_033463		4930429F11Rik	-	RIKEN cDNA 4930429F11 gene	ncRNA
unique_peak1-4137-16-6-1.31090872021046-1.49151883326344	chr2	92645203	92645965	+	0	NA	Intergenic	Intergenic	-109674	NM_030725	80976	Mm.33490	NM_030725	ENSMUSG00000027220	Syt13	5730409J20Rik|AI549909|mKIAA1427	synaptotagmin XIII	protein-coding
common_peak1-16566-15-13-0.204809828498052-0.368541233333383	chr5	146675481	146676250	+	0	NA	intron (NM_007818, intron 9 of 12)	intron (NM_007818, intron 9 of 12)	15565	NM_007818	13112	Mm.332844	NM_007818	ENSMUSG00000056035	Cyp3a11	AI256190|Cyp3a|IIIAm1|Pcn	cytochrome P450, family 3, subfamily a, polypeptide 11	protein-coding
common_peak1-13525-61-91--0.140812626307673-0.380928408457974	chr2	147011862	147013873	+	0	NA	promoter-TSS (NM_010919)	promoter-TSS (NM_010919)	-293	NR_108091	78068	Mm.261511	NR_108091	ENSMUSG00000053545	6430503K07Rik	-	RIKEN cDNA 6430503K07 gene	ncRNA
common_peak1-10815-29-42--0.313974674086987-0.439405572480898	chr14	79586977	79588058	+	0	NA	intron (NM_027906, intron 42 of 44)	intron (NM_027906, intron 42 of 44)	59657	NM_001033215	105590	Mm.486536	NM_001033215	ENSMUSG00000071262	Zfp957	AU017455	zinc finger protein 957	protein-coding
common_peak1-8648-13-12-0.0780323124966764-0.334470287753051	chr10	127195178	127195923	+	0	NA	Intergenic	ORR1E|LTR|MaLR	-1269	NM_080436	107605	Mm.484271	NM_080436	ENSMUSG00000089789	Rdh1	-	retinol dehydrogenase 1 (all trans)	protein-coding
common_peak2-27612-34-60--0.548668810561621-0.994417253404935	chr3	104358366	104360443	+	0	NA	Intergenic	Intergenic	-43625	NM_001025067	269473	Mm.34855	NM_001025067	ENSMUSG00000032913	Lrig2	4632419I10Rik|BB096938	leucine-rich repeats and immunoglobulin-like domains 2	protein-coding
unique_peak2-38313-0-4--3.16205902536157-1.10720996964787	chr6	144087656	144088016	+	0	NA	intron (NM_001243163, intron 2 of 13)	intron (NM_001243163, intron 2 of 13)	70252	NM_001113559	20678	Mm.1752	NM_011444	ENSMUSG00000041540	Sox5	A730017D01Rik|AI528773	SRY (sex determining region Y)-box 5	protein-coding
unique_peak2-32607-4-4--0.345388608740609-0.864171920961574	chr1	93235961	93236261	+	0	NA	intron (NM_001033292, intron 5 of 8)	intron (NM_001033292, intron 5 of 8)	-11539	NM_027551	70788	Mm.68617	NM_027551	ENSMUSG00000026308	Klhl30	4631423F02Rik	kelch-like 30	protein-coding
common_peak2-19873-7-6--0.00826409175941478-0.97990265578305	chr1	93343617	93344055	+	0	NA	intron (NM_011066, intron 4 of 22)	intron (NM_011066, intron 4 of 22)	12069	NM_011066	18627	Mm.482463	NM_011066	ENSMUSG00000055866	Per2	mKIAA0347|mPer2	period circadian clock 2	protein-coding
common_peak2-23291-5-10--1.16381195464315-1.33892459842472	chr15	31224936	31225438	+	0	NA	3' UTR (NM_001164441, exon 4 of 4)	3' UTR (NM_001164441, exon 4 of 4)	71047	NM_146057	223453	Mm.222867	NM_146057	ENSMUSG00000039168	Dap	4921531N22Rik|AI789753|AU040360	death-associated protein	protein-coding
common_peak1-11971-161-173-0.620706190778093-4.77994076915997	chr17	6826903	6829419	+	0	NA	Intergenic	Intergenic	-2518	NR_028305	100040525	Mm.472852	NR_028305		Tmem181c-ps	100040596|ENSMUSG00000079729|ENSMUSG00000079731|Tmem181d-ps	transmembrane protein 181C, pseudogene	pseudo
unique_peak1-4863-12-5-1.06381348436648-1.78669045979184	chr4	5792429	5793033	+	0	NA	Intergenic	Lx8|LINE|L1	221405	NM_173426	242297	Mm.331470	NM_173426	ENSMUSG00000049119	Fam110b	1700012H17Rik|5031405P22|AW049855	family with sequence similarity 110, member B	protein-coding
common_peak2-27762-29-52--0.615630373948088-1.02702006187975	chr3	129830383	129831563	+	0	NA	Intergenic	Intergenic	-52790	NM_029838	77018	Mm.91728	NM_029838	ENSMUSG00000058897	Col25a1	2700062B08Rik|CLAC-P	collagen, type XXV, alpha 1	protein-coding
unique_peak2-35559-4-18--2.27138802729683-2.39353597935438	chr17	65885066	65885608	+	0	NA	intron (NM_001008973, intron 1 of 14)	intron (NM_001008973, intron 1 of 14)	4785	NM_001008973	381107	Mm.141275	NM_001008973	ENSMUSG00000045036	Tmem232	E130009J12Rik|Gm940|Tes13-L|Tes13-S	transmembrane protein 232	protein-coding
common_peak2-25954-72-121--0.262153524690569-0.652981896997973	chr19	47579418	47580826	+	0	NA	intron (NM_175360, intron 9 of 9)	intron (NM_175360, intron 9 of 9)	-7350	NR_045322	100503104	Mm.442735	NR_045322	ENSMUSG00000097990	Gm19557	-	predicted gene, 19557	ncRNA
unique_peak2-36907-4-4--0.345388608740609-0.864171920961574	chr3	97300289	97300571	+	0	NA	Intergenic	(TTTTG)n|Simple_repeat|Simple_repeat	-85328	NM_146275	258272	Mm.377406	NM_146275	ENSMUSG00000051392	Olfr1402	MOR217-1	olfactory receptor 1402	protein-coding
common_peak1-17742-60-92--0.1848669494875-0.425896051280179	chr7	80992656	80994509	+	0	NA	Intergenic	Lx|LINE|L1	22772	NR_102375	100861851		NR_102375		Gm21269	-	predicted gene, 21269	ncRNA
common_peak1-12045-136-202-0.10497075733081-0.433418441439837	chr17	21531366	21533417	+	0	NA	intron (NM_172486, intron 3 of 3)	Lx5|LINE|L1	11679	NM_172486	210503	Mm.33443	NM_172486	ENSMUSG00000062743	Zfp677	A830058L05Rik|Tce8	zinc finger protein 677	protein-coding
unique_peak1-5982-13-2-2.19350952991661-3.03832868024006	chr6	97410091	97410825	+	0	NA	intron (NM_145148, intron 2 of 23)	B3|SINE|B2	157193	NM_145148	232288	Mm.27789	NM_145148	ENSMUSG00000030064	Frmd4b	6030440G05Rik|C87375|GOBLIN|GRSP1|R74720|mKIAA1013	FERM domain containing 4B	protein-coding
unique_peak1-6777-9-2-1.60465090568306-1.87199725847353	chr8	62121059	62121657	+	0	NA	Intergenic	Intergenic	730806	NM_173411	234290	Mm.39244	NM_173411	ENSMUSG00000049946	BC030500	-	cDNA sequence BC030500	protein-coding
unique_peak2-33328-1-9--2.94898510510411-2.31132995230379	chr11	19409367	19409867	+	0	NA	Intergenic	Lx9|LINE|L1	-414828	NM_033523	114716	Mm.266627	NM_033523	ENSMUSG00000045671	Spred2	C79158	sprouty-related, EVH1 domain containing 2	protein-coding
common_peak1-12177-13-9-0.456543935750406-0.53895475198017	chr17	31433412	31434119	+	0	NA	5' UTR (NM_001242427, exon 1 of 20)	5' UTR (NM_001242427, exon 1 of 20)	596	NM_001242427	224674	Mm.311395	NM_153062	ENSMUSG00000024036	Slc37a1	G3PP	solute carrier family 37 (glycerol-3-phosphate transporter), member 1	protein-coding
common_peak1-11743-19-25--0.297752391479405-0.376654945067947	chr16	35022440	35023206	+	0	NA	intron (NM_023587, intron 1 of 6)	CpG	316	NM_023587	70757	Mm.27286	NM_023587	ENSMUSG00000035376	Ptplb	6330408J20Rik|AI255777|AI481689|HACD2	protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b	protein-coding
common_peak1-17069-12-14--0.25811461052088-0.309074325783021	chr6	108064882	108065581	+	0	NA	intron (NM_145937, intron 8 of 8)	L1MEc|LINE|L1	50192	NM_178391	74729	Mm.56539	NM_178391	ENSMUSG00000034639	Setmar	5830404F24Rik|Etet2	SET domain without mariner transposase fusion	protein-coding
unique_peak2-38568-7-8--0.370834171144123-1.00793137938329	chr7	66383548	66383968	+	0	NA	Intergenic	L1Md_T|LINE|L1	-100362	NM_173010	22215	Mm.9002	NM_011668	ENSMUSG00000025326	Ube3a	4732496B02|5830462N02Rik|A130086L21Rik|Hpve6a|mKIAA4216	ubiquitin protein ligase E3A	protein-coding
common_peak2-26839-9-6-0.382258484346616-1.11707584880836	chr2	153258398	153258681	+	0	NA	intron (NM_001001986, intron 2 of 7)	intron (NM_001001986, intron 2 of 7)	11676	NM_001001986	329540	Mm.50600	NM_001001986	ENSMUSG00000061411	Nol4l	4931410H15|8430427H17Rik|AI429157|Gm1636	nucleolar protein 4-like	protein-coding
common_peak2-25588-13-19--0.543456064249594-0.466170754204149	chr19	7482647	7483242	+	0	NA	Intergenic	B3|SINE|B2	-9171	NM_175381	108899	Mm.386838	NM_175381	ENSMUSG00000053080	2700081O15Rik	AI255177|AI848741|AW742297	RIKEN cDNA 2700081O15 gene	protein-coding
unique_peak1-4676-8-2-1.42025991722641-1.65811743852845	chr3	94804317	94804840	+	0	NA	intron (NM_175356, intron 8 of 10)	ID_B1|SINE|B4	-3512	NR_105980	102465613		NR_105980		Mir7013	mmu-mir-7013	microRNA mir-7013	ncRNA
unique_peak2-35076-5-6--0.511735258063458-0.947717972411649	chr16	15985297	15985661	+	0	NA	intron (NM_146068, intron 8 of 19)	intron (NM_146068, intron 8 of 19)	98100	NM_007679	12609	Mm.347407	NM_007679		Cebpd	-	CCAAT/enhancer binding protein (C/EBP), delta	protein-coding
common_peak1-11820-43-62--0.194716737976214-0.39202633512402	chr16	77013555	77014623	+	0	NA	promoter-TSS (NM_013918)	promoter-TSS (NM_013918)	-225	NM_013918	30940	Mm.40986	NM_013918	ENSMUSG00000022867	Usp25	-	ubiquitin specific peptidase 25	protein-coding
common_peak2-22273-121-108-0.799181457101072-5.26447178243434	chr13	6608779	6612991	+	0	NA	intron (NM_001291071, intron 8 of 21)	intron (NM_001291071, intron 8 of 21)	37132	NM_019703	56421	Mm.273874	NM_019703	ENSMUSG00000021196	Pfkp	1200015H23Rik|9330125N24Rik|ATP-PFK|PFK-C|PFK-P	phosphofructokinase, platelet	protein-coding
common_peak1-14842-7-7--0.200909169701811-0.97990265578305	chr3	94648772	94649243	+	0	NA	intron (NM_172683, intron 1 of 18)	B1_Mus1|SINE|Alu	7518	NM_172683	229584	Mm.274787	NM_172683	ENSMUSG00000038902	Pogz	9530006B08Rik	pogo transposable element with ZNF domain	protein-coding
common_peak2-32001-105-149-0.0925152200272858-0.386079731936961	chr9	71485051	71486148	+	0	NA	intron (NM_026599, intron 14 of 18)	ID4_|SINE|ID	-45432	NM_001033208	102371	Mm.27585	NM_001033208	ENSMUSG00000041361	Myzap	AA407270|AV006038|Gcom1|Gm640|Grinl1a7|Myozap	myocardial zonula adherens protein	protein-coding
common_peak2-25654-18-16-0.225456309978012-0.397739447719379	chr19	10279136	10279905	+	0	NA	intron (NM_026919, intron 1 of 3)	MIRc|SINE|MIR	828	NM_026919	69038	Mm.375100	NM_026919	ENSMUSG00000036372	Tmem258	1810006K21Rik	transmembrane protein 258	protein-coding
unique_peak1-1736-9-5-0.604650905683064-1.21398586181642	chr13	101311113	101311625	+	0	NA	intron (NM_008756, intron 1 of 8)	intron (NM_008756, intron 1 of 8)	11084	NM_008756	18260	Mm.4807	NM_008756	ENSMUSG00000021638	Ocln	AI503564|Ocl	occludin	protein-coding
common_peak2-26529-40-69--0.470307334193868-0.889546191492175	chr2	91265212	91266114	+	0	NA	intron (NM_175123, intron 1 of 8)	intron (NM_175123, intron 1 of 8)	19136	NM_175123	228356	Mm.386861	NM_175123	ENSMUSG00000040591	1110051M20Rik	AI586322	RIKEN cDNA 1110051M20 gene	protein-coding
common_peak1-15446-11-8-0.338768582809301-1.14218153353838	chr4	97465723	97466341	+	0	NA	intron (NM_010905, intron 2 of 10)	intron (NM_010905, intron 2 of 10)	21715	NM_010905	18027	Mm.31274	NM_010905	ENSMUSG00000028565	Nfia	1110047K16Rik|9430022M17Rik|CTF|NF1-A|NF1A	nuclear factor I/A	protein-coding
unique_peak1-4533-22-6-1.8399291830298-3.01815507148775	chr3	37348389	37349242	+	0	NA	intron (NM_001163511, intron 10 of 15)	intron (NM_001163511, intron 10 of 15)	29613	NM_021343	57815	Mm.172679	NM_021343	ENSMUSG00000027722	Spata5	2510048F20Rik|C78064|Spaf	spermatogenesis associated 5	protein-coding
unique_peak1-6837-12-9-0.326847890200276-0.459837087125828	chr8	81756865	81757337	+	0	NA	intron (NM_026315, intron 1 of 5)	L1M5|LINE|L1	15381	NM_026315	67687	Mm.178707	NM_026315	ENSMUSG00000031682	1700011L22Rik	-	RIKEN cDNA 1700011L22 gene	protein-coding
common_peak1-16028-24-10-1.33377828413042-2.22881803703862	chr5	36136268	36137277	+	0	NA	intron (NM_001177700, intron 1 of 16)	intron (NM_001177700, intron 1 of 16)	36243	NM_177678	231148	Mm.254446	NM_177678	ENSMUSG00000029095	Ablim2	AI606905|C230091L11	actin-binding LIM protein 2	protein-coding
unique_peak1-1164-10-10--0.103016273628528-0.301029995663987	chr11	99104720	99105404	+	0	NA	intron (NM_172946, intron 1 of 5)	intron (NM_172946, intron 1 of 5)	319	NM_172946	268481	Mm.133193	NM_172946	ENSMUSG00000035849	Krt222	6330509G02Rik	keratin 222	protein-coding
unique_peak2-33053-8-20--1.38709500483119-1.45476480588849	chr10	75921109	75921836	+	0	NA	TTS (NM_172550)	TTS (NM_172550)	9646	NM_029816	76964	Mm.472489	NM_029816	ENSMUSG00000009114	2610028H24Rik	ORF67	RIKEN cDNA 2610028H24 gene	protein-coding
unique_peak2-33122-1-5--2.2120195109379-1.32905871926422	chr10	81457577	81457881	+	0	NA	Intergenic	MurERV4-int|LTR|ERVK	-53143	NM_001024626	408062	Mm.391409	NM_001024626		Zfp873	-	zinc finger protein 873	protein-coding
common_peak2-26055-21-13-0.762134343208631-1.0220094258199	chr2	32259654	32260205	+	0	NA	Intergenic	Intergenic	8519	NM_133783	96979	Mm.28048	NM_133783	ENSMUSG00000026820	Ptges2	0610038H10Rik|C79137|Gbf1|Mpges2|Pges2	prostaglandin E synthase 2	protein-coding
common_peak2-22347-10-24--1.28744084476596-1.59083646988122	chr13	23751045	23751597	+	0	NA	Intergenic	Intergenic	24507	NM_178189	319164	Mm.261973	NM_178189	ENSMUSG00000069270	Hist1h2ac	-	histone cluster 1, H2ac	protein-coding
common_peak1-11450-104-127-0.304745201212158-1.03468595767841	chr15	101245395	101247610	+	0	NA	intron (NM_033073, intron 2 of 8)	intron (NM_033073, intron 2 of 8)	3668	NM_033073	110310	Mm.486285	NM_033073		Krt7	D15Wsu77e|K7|Krt2-7	keratin 7	protein-coding
common_peak2-26513-29-32-0.0678959612566574-0.330208782692001	chr2	90744605	90745345	+	0	NA	promoter-TSS (NM_025991)	promoter-TSS (NM_025991)	32	NM_025991	67136	Mm.330394	NM_025991	ENSMUSG00000005505	Kbtbd4	2510026C23Rik	kelch repeat and BTB (POZ) domain containing 4	protein-coding
unique_peak1-1080-9-6-0.382258484346616-1.11707584880836	chr11	86646997	86647501	+	0	NA	Intergenic	Intergenic	-26087	NM_026191	67487	Mm.260627	NM_026191	ENSMUSG00000018425	Dhx40	2410016C14Rik|ARG147|DDX40|PAD	DEAH (Asp-Glu-Ala-His) box polypeptide 40	protein-coding
common_peak2-31156-24-22-0.269647946710704-0.457753417732779	chr8	44455941	44456841	+	0	NA	Intergenic	RMER12|LTR|ERVK	-64028	NM_009556	22702	Mm.285848	NM_009556	ENSMUSG00000051176	Zfp42	Rex-1|Rex1|Zfp-42	zinc finger protein 42	protein-coding
common_peak2-22479-144-182-0.353929698158383-1.7161858984123	chr13	48869870	48871855	+	0	NA	Intergenic	L1MB3|LINE|L1	95392	NM_011078	18676	Mm.486213	NM_011078	ENSMUSG00000038025	Phf2	GRC5	PHD finger protein 2	protein-coding
common_peak1-17985-10-17--0.813509656433543-0.699649909729472	chr7	135605762	135606267	+	0	NA	promoter-TSS (NM_009383)	promoter-TSS (NM_009383)	-987	NM_009383	21843	Mm.242072	NM_009383	ENSMUSG00000030846	Tial1	5330433G13Rik|AL033329|TIAR|mTIAR	Tia1 cytotoxic granule-associated RNA binding protein-like 1	protein-coding
unique_peak2-38852-0-5--3.42509343119537-1.32905871926422	chr7	144448237	144448643	+	0	NA	intron (NM_010096, intron 6 of 15)	intron (NM_010096, intron 6 of 15)	22074	NR_045885	100038555	Mm.444788	NR_045885		Gm10578	ENSMUSG00000073800	predicted gene 10578	ncRNA
unique_peak2-39650-3-12--2.11442280810037-2.15846853396659	chr9	106368520	106369140	+	0	NA	promoter-TSS (NM_001159652)	promoter-TSS (NM_001159652)	-559	NM_001159652	436090	Mm.482905	NM_001159652	ENSMUSG00000091735	Gpr62	4933402E03Rik	G protein-coupled receptor 62	protein-coding
common_peak2-21324-25-12-1.16141018720401-1.87883858401928	chr11	75537968	75538500	+	0	NA	Intergenic	B4|SINE|B4	-8155	NM_009536	22627	Mm.234700	NM_009536	ENSMUSG00000020849	Ywhae	AU019196	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide	protein-coding
common_peak2-25416-26-11-1.34293659143731-2.2880788707084	chr19	53903336	53903792	+	0	NA	intron (NM_001170847, intron 5 of 13)	Lx3B|LINE|L1	-63157	NM_011050	18569	Mm.1605	NM_011050	ENSMUSG00000024975	Pdcd4	D19Ucla1|Ma3|Tis	programmed cell death 4	protein-coding
common_peak2-24691-9-6-0.382258484346616-1.11707584880836	chr17	44690926	44691434	+	0	NA	intron (NR_073425, intron 5 of 5)	intron (NR_073425, intron 5 of 5)	181945	NR_073425	12393	Mm.391013	NM_009820	ENSMUSG00000039153	Runx2	AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a	runt related transcription factor 2	protein-coding
unique_peak2-35204-6-8--0.60452689106201-1.03789460276074	chr16	84773815	84774340	+	0	NA	promoter-TSS (NM_023844)	promoter-TSS (NM_023844)	-291	NM_023844	67374	Mm.41758	NM_023844	ENSMUSG00000053062	Jam2	1110002N23Rik|2410030G21Rik|2410167M24Rik|JAM-2|JAM-B|Jcam2|VE-JAM	junction adhesion molecule 2	protein-coding
unique_peak2-38549-6-16--1.52206473087004-1.32521814697968	chr7	56018911	56019580	+	0	NA	Intergenic	L1MD1|LINE|L1	-25128	NM_028031	243983	Mm.279116	NM_028031	ENSMUSG00000030471	Zdhhc13	2410004E01Rik|C530010M18|HIP3RP|Hip14l|kojak|skc4	zinc finger, DHHC domain containing 13	protein-coding
common_peak2-25359-13-19--0.543456064249594-0.466170754204149	chr18	80707734	80708284	+	0	NA	Intergenic	L1Md_T|LINE|L1	33276	NR_028424	100039348	Mm.254722	NR_028424		Gm2176	A430076E10Rik	glucosamine-6-phosphate deaminase 1 pseudogene	pseudo
common_peak2-24442-22-16-0.559821263837065-0.733541631673787	chr17	21845454	21846165	+	0	NA	intron (NM_001008501, intron 2 of 5)	intron (NM_001008501, intron 2 of 5)	1101	NM_001008501	240034	Mm.34723	NM_001008501	ENSMUSG00000067928	Zfp760	9430018I06|BC029103	zinc finger protein 760	protein-coding
common_peak2-25240-27-29-0.0846553552867171-0.333081040816753	chr18	64515992	64516581	+	0	NA	intron (NM_194268, intron 1 of 1)	intron (NM_194268, intron 1 of 1)	16268	NM_194268	225631	Mm.234723	NM_194268	ENSMUSG00000045991	Onecut2	C730009D12|OC-2|Oc2	one cut domain, family member 2	protein-coding
common_peak1-8361-54-28-1.31510476650216-4.65239418269556	chr10	59577428	59579344	+	0	NA	intron (NM_052994, intron 1 of 10)	intron (NM_052994, intron 1 of 10)	9381	NM_052994	94214	Mm.153429	NM_052994	ENSMUSG00000058297	Spock2	AA407235|Gcap26|mKIAA0275	sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2	protein-coding
unique_peak2-34914-5-7--0.704380336005853-1.01466476204226	chr15	83463514	83463904	+	0	NA	intron (NM_022723, intron 8 of 21)	intron (NM_022723, intron 8 of 21)	-38122	NM_183017	223723	Mm.46778	NM_183017	ENSMUSG00000016757	Ttll12	BC055368|D430005B17	tubulin tyrosine ligase-like family, member 12	protein-coding
common_peak1-15498-13-15--0.221527969362231-0.308519316180257	chr4	115103133	115103834	+	0	NA	intron (NM_172306, intron 4 of 11)	L1Md_T|LINE|L1	19254	NM_172306	13118	Mm.448292	NM_172306	ENSMUSG00000078597	Cyp4a12b	BC060945|Cyp4a12	cytochrome P450, family 4, subfamily a, polypeptide 12B	protein-coding
common_peak1-8719-64-59-0.558555806100085-1.55153498638873	chr11	102316843	102319230	+	0	NA	intron (NM_010575, intron 26 of 29)	B1_Mus1|SINE|Alu	-9059	NM_199200	217219	Mm.259924	NM_199200	ENSMUSG00000034685	Fam171a2	-	family with sequence similarity 171, member A2	protein-coding
common_peak2-22510-18-32--0.731474968130102-0.907815120698057	chr13	53376957	53377929	+	0	NA	intron (NM_013846, intron 1 of 8)	intron (NM_013846, intron 1 of 8)	4035	NM_013846	26564	Mm.342774	NM_013846	ENSMUSG00000021464	Ror2	Ntrkr2|mRor2	receptor tyrosine kinase-like orphan receptor 2	protein-coding
common_peak2-20094-16-32--0.926130477090392-1.31432283146954	chr1	156718231	156719182	+	0	NA	Intergenic	L1M2|LINE|L1	-145656	NM_009782	12290	Mm.267517	NM_009782	ENSMUSG00000004110	Cacna1e	A430040I15|BII|Cach6|Cacnl1a6|Cav2.3|Cchra1|alpha1E	calcium channel, voltage-dependent, R type, alpha 1E subunit	protein-coding
common_peak1-13617-26-21-0.468467473521165-0.647723624534446	chr2	24440228	24441356	+	0	NA	Intergenic	Intergenic	-109673	NM_011040	18510	Mm.2533	NM_011040	ENSMUSG00000026976	Pax8	Pax-8	paired box 8	protein-coding
common_peak2-29558-24-34--0.33607311417725-0.427313034957882	chr6	42692407	42693320	+	0	NA	Intergenic	Intergenic	-1175	NM_001011799	258016	Mm.377328	NM_001011799	ENSMUSG00000095831	Olfr453	MOR257-8P	olfactory receptor 453	protein-coding
unique_peak2-37252-5-4--0.0263084308932156-0.909929411522249	chr4	103265343	103265728	+	0	NA	Intergenic	L1Md_T|LINE|L1	210430	NR_040673	622167	Mm.244115	NR_040673	ENSMUSG00000086136	Gm12718	OTTMUSG00000008109	predicted gene 12718	ncRNA
unique_peak2-34079-7-4-0.477162735410827-1.09384600808989	chr13	5870926	5871357	+	0	NA	Intergenic	Intergenic	10406	NM_011803	23849	Mm.275036	NM_011803	ENSMUSG00000000078	Klf6	AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9	Kruppel-like factor 6	protein-coding
common_peak2-21196-23-24-0.0779113147343562-0.318406410381916	chr11	60537897	60538867	+	0	NA	intron (NM_022009, intron 2 of 29)	intron (NM_022009, intron 2 of 29)	2341	NM_022009	14248	Mm.339755	NM_022009	ENSMUSG00000002812	Flii	3632430F08Rik|Fli1|Fliih	flightless I homolog (Drosophila)	protein-coding
common_peak1-10922-52-69--0.0210230266792673-0.301029995664019	chr15	8108348	8109973	+	0	NA	3' UTR (NM_133227, exon 35 of 35)	3' UTR (NM_133227, exon 35 of 35)	-9946	NM_001162906	73692	Mm.164436	NM_001162906	ENSMUSG00000039801	2410089E03Rik	4732468D17Rik|b2b012Clo	RIKEN cDNA 2410089E03 gene	protein-coding
common_peak2-21533-124-109-0.82852060586402-5.65681675167207	chr11	95384464	95385286	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-8996	NM_130858	104079	Mm.22970	NM_130858	ENSMUSG00000046719	Nxph3	-	neurexophilin 3	protein-coding
unique_peak2-39582-10-6-0.549060422951165-1.21398586181642	chr9	75769218	75769641	+	0	NA	Intergenic	L1Md_T|LINE|L1	-93355	NM_173731	208982	Mm.82306	NM_173731	ENSMUSG00000007908	Hmgcll1	BC037381	3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1	protein-coding
unique_peak2-37114-5-5--0.289342836727009-0.909929411522249	chr4	7942934	7943361	+	0	NA	Intergenic	L1_Mur3|LINE|L1	223041	NM_007592	12319	Mm.119320	NM_007592		Car8	AW546993|Ca8|Cals|Cals1|Carp|wdl	carbonic anhydrase 8	protein-coding
common_peak2-26541-16-12-0.417823924126969-0.489164546851866	chr2	92740537	92741137	+	0	NA	Intergenic	RSINE1|SINE|B4	-14421	NM_030725	80976	Mm.33490	NM_030725	ENSMUSG00000027220	Syt13	5730409J20Rik|AI549909|mKIAA1427	synaptotagmin XIII	protein-coding
common_peak1-14720-53-54-0.359613298891269-0.804633617149182	chr3	79590775	79592203	+	0	NA	Intergenic	Intergenic	-49773	NM_212452	381489	Mm.331086	NM_212452		Rxfp1	Gm1018|Lgr7	relaxin/insulin-like family peptide receptor 1	protein-coding
common_peak1-8048-45-43-0.400926406707574-0.786568022251753	chr1	172081987	172083419	+	0	NA	intron (NM_133806, intron 5 of 10)	intron (NM_133806, intron 5 of 10)	22374	NM_133806	107652	Mm.27969	NM_133806	ENSMUSG00000026670	Uap1	AA420407|AA437972|AGX-1|AGX-2|AGX1|AgX|ESTM38|SPAG2	UDP-N-acetylglucosamine pyrophosphorylase 1	protein-coding
common_peak1-12927-63-39-1.11638449618323-4.37381541636593	chr19	5387945	5390585	+	0	NA	promoter-TSS (NM_016882)	promoter-TSS (NM_016882)	-562	NM_016882	20227	Mm.34562	NM_016882	ENSMUSG00000039148	Sart1	U5-110K	squamous cell carcinoma antigen recognized by T cells 1	protein-coding
unique_peak1-6101-10-1-2.35641534500877-2.57096726280955	chr6	125449224	125449820	+	0	NA	Intergenic	PB1D10|SINE|Alu	-4749	NM_007657	12527	Mm.210676	NM_007657	ENSMUSG00000030342	Cd9	Tspan29	CD9 antigen	protein-coding
unique_peak2-35049-4-9--1.34538860874061-1.36011389749466	chr16	5255448	5255917	+	0	NA	intron (NM_027446, intron 1 of 7)	intron (NM_027446, intron 1 of 7)	367	NM_027446	70511	Mm.45780	NM_027446	ENSMUSG00000022544	Fam86	5730409G15Rik|Fam86a	family with sequence similarity 86	protein-coding
common_peak2-32157-17-21--0.24113528043226-0.322753776620787	chr9	108783598	108784598	+	0	NA	intron (NM_134420, intron 18 of 19)	intron (NM_134420, intron 18 of 19)	27724	NM_134420	171429	Mm.45201	NM_134420		Slc26a6	B930010B04Rik|CFEX|Pat-1|Pat1	solute carrier family 26, member 6	protein-coding
common_peak2-25136-7-7--0.200909169701811-0.97990265578305	chr18	42054926	42055337	+	0	NA	intron (NM_029942, intron 5 of 6)	intron (NM_029942, intron 5 of 6)	55717	NM_029942	77619	Mm.30649	NM_029942	ENSMUSG00000056671	Prelid2	1700003A01Rik|C330008K14Rik	PRELI domain containing 2	protein-coding
common_peak1-10990-145-226-0.0551092458388691-0.348035233751242	chr15	36281978	36283933	+	0	NA	Intergenic	Intergenic	-70053	NM_013923	30945	Mm.5181	NM_013923	ENSMUSG00000022280	Rnf19a	AA032313|Dorfin|Rnf19|UIP117|Ubce7ip2|XYbp	ring finger protein 19A	protein-coding
common_peak1-8296-9-8-0.0196884049619079-1.03275496310833	chr10	34095816	34096370	+	0	NA	intron (NM_176968, intron 6 of 11)	intron (NM_176968, intron 6 of 11)	-13694	NM_009925	12813	Mm.443177	NM_009925	ENSMUSG00000039462	Col10a1	Col10|Col10a-1	collagen, type X, alpha 1	protein-coding
common_peak1-14691-61-71-0.212824328307028-0.504282745370237	chr3	65973600	65975642	+	0	NA	intron (NM_145820, intron 7 of 13)	intron (NM_145820, intron 7 of 13)	-49188	NM_008987	19288	Mm.276776	NM_008987	ENSMUSG00000027832	Ptx3	AI607804|TSG-14	pentraxin related gene	protein-coding
common_peak2-32403-8-8--0.164702583494742-1.00793137938329	chrX	150459200	150459651	+	0	NA	intron (NM_030036, intron 2 of 2).2	L1Md_F2|LINE|L1	8945	NM_001243017	625713	Mm.489577	NM_001243017	ENSMUSG00000094592	Gm15140	OTTMUSG00000019256	predicted gene 15140	protein-coding
unique_peak1-2037-12-5-1.06381348436648-1.78669045979184	chr15	25644139	25644640	+	0	NA	intron (NM_019472, intron 4 of 40)	intron (NM_019472, intron 4 of 40)	92084	NM_019472	17909	Mm.60590	NM_019472	ENSMUSG00000022272	Myo10	AW048724|D15Ertd600e|mKIAA0799	myosin X	protein-coding
unique_peak2-38036-5-6--0.511735258063458-0.947717972411649	chr6	38254377	38254726	+	0	NA	Intergenic	ID_B1|SINE|B4	-5292	NM_172467	209032	Mm.101389	NM_172467	ENSMUSG00000047749	Zc3hav1l	B130055L09Rik|E430016P22Rik	zinc finger CCCH-type, antiviral 1-like	protein-coding
unique_peak2-37265-2-5--1.50241675698448-1.08602067057793	chr4	108625378	108625744	+	0	NA	intron (NR_040664, intron 2 of 5)	intron (NR_040664, intron 2 of 5)	19121	NR_040664	77173	Mm.402545	NR_040664	ENSMUSG00000086483	8030443G20Rik	-	RIKEN cDNA 8030443G20 gene	ncRNA
unique_peak1-4808-9-3-1.18961340640422-1.57096726280955	chr3	137981419	137981906	+	0	NA	intron (NM_026945, intron 2 of 8)	intron (NM_026945, intron 2 of 8)	5412	NM_026945	69117	Mm.46265	NM_026945	ENSMUSG00000053054	Adh6a	1810009C16Rik|Adh5a	alcohol dehydrogenase 6A (class V)	protein-coding
common_peak1-8118-13-6-0.971117108580164-1.01572999746118	chr1	184274504	184275013	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	-3021	NM_175127	67948	Mm.30737	NM_175127	ENSMUSG00000047539	Fbxo28	4833428J17Rik|5730505P19Rik|D1Ertd578e|Fbx28|mKIAA0483	F-box protein 28	protein-coding
unique_peak2-38632-3-9--1.73591118484664-1.57096726280955	chr7	82335371	82335840	+	0	NA	intron (NM_153579, intron 2 of 12)	intron (NM_153579, intron 2 of 12)	117667	NM_001109753	64176	Mm.273082	NM_153579	ENSMUSG00000053025	Sv2b	A830038F04Rik|AI850768|mKIAA0735	synaptic vesicle glycoprotein 2 b	protein-coding
common_peak2-22849-30-22-0.64611345343486-1.04213512323541	chr14	24490738	24491388	+	0	NA	intron (NM_001253374, intron 1 of 28)	intron (NM_001253374, intron 1 of 28)	332364	NM_001253375	16531	Mm.343607	NM_010610	ENSMUSG00000063142	Kcnma1	5730414M22Rik|BKCa|MaxiK|Slo|Slo1|mSlo|mSlo1	potassium large conductance calcium-activated channel, subfamily M, alpha member 1	protein-coding
common_peak2-24308-24-55--1.01414501928989-2.24341076832583	chr17	35700018	35701147	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-3848	NM_175148	69542	Mm.265291	NM_175148	ENSMUSG00000039269	2300002M23Rik	Stg|emprin	RIKEN cDNA 2300002M23 gene	protein-coding
unique_peak2-34834-5-7--0.704380336005853-1.01466476204226	chr15	75616726	75617115	+	0	NA	intron (NM_172121, intron 4 of 11)	intron (NM_172121, intron 4 of 11)	-38568	NM_194350	378435	Mm.309589	NM_194350	ENSMUSG00000047591	Mafa	RIPE3b1	v-maf musculoaponeurotic fibrosarcoma oncogene family, protein A (avian)	protein-coding
common_peak2-30647-12-15--0.351224014912361-0.332077462497413	chr7	98703114	98703761	+	0	NA	intron (NM_011807, intron 2 of 22)	intron (NM_011807, intron 2 of 22)	464141	NM_011807	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
unique_peak2-36160-8-11--0.579740082773585-1.14218153353838	chr2	26417801	26418402	+	0	NA	Intergenic	Intergenic	-18475	NM_178444	353156	Mm.268933	NM_178444	ENSMUSG00000026921	Egfl7	VE-statin|Zneu1	EGF-like domain 7	protein-coding
common_peak2-24378-20-19-0.16614668970383-0.348739088570342	chr17	10840197	10840811	+	0	NA	intron (NM_027032, intron 2 of 4)	IAPLTR2_Mm|LTR|ERVK	191422	NR_077238	319750	Mm.383485	NR_077237	ENSMUSG00000089633	A230009B12Rik	-	RIKEN cDNA A230009B12 gene	ncRNA
common_peak1-14781-35-40-0.0738182538444203-0.324581211600972	chr3	89213360	89214607	+	0	NA	intron (NM_177041, intron 2 of 7)	B3A|SINE|B2	1802	NM_177041	319945	Mm.258142	NM_177041	ENSMUSG00000042642	Flad1	A930017E24Rik|Pp591	RFad1, flavin adenine dinucleotide synthetase, homolog (yeast)	protein-coding
common_peak1-15612-10-9-0.0344872501214071-1.05503135781948	chr4	132842522	132843000	+	0	NA	Intergenic	L1MC|LINE|L1	-9056	NR_110978	52174	Mm.244748	NM_025667	ENSMUSG00000028857	Tmem222	5730406H10Rik|AA409341|D4Ertd196e	transmembrane protein 222	protein-coding
unique_peak2-32766-7-7--0.200909169701811-0.97990265578305	chr1	171469999	171470347	+	0	NA	Intergenic	Intergenic	-8578	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
unique_peak2-38415-4-9--1.34538860874061-1.36011389749466	chr7	24611141	24611578	+	0	NA	Intergenic	L1Md_F|LINE|L1	9386	NM_001166721	546943	Mm.480275	NM_001166721	ENSMUSG00000096859	Vmn1r176	Gm5998	vomeronasal 1 receptor 176	protein-coding
common_peak2-31430-14-14--0.00767443525087419-0.308519316180257	chr8	94917682	94918327	+	0	NA	Intergenic	(TCTA)n|Simple_repeat|Simple_repeat	36309	NM_018826	54352	Mm.101153	NM_018826	ENSMUSG00000031737	Irx5	-	Iroquois related homeobox 5 (Drosophila)	protein-coding
common_peak1-16026-74-86-0.272943081129879-0.712129232458725	chr5	36073978	36076366	+	0	NA	Intergenic	Intergenic	-3247	NM_194344	231147	Mm.290429	NM_194344	ENSMUSG00000036553	Sh3tc1	4631428G15|BC024909	SH3 domain and tetratricopeptide repeats 1	protein-coding
common_peak1-10991-20-18-0.240147271147608-0.388034239052786	chr15	36345661	36346526	+	0	NA	Intergenic	Intergenic	80453	NM_175134	68839	Mm.396537	NM_175134	ENSMUSG00000048307	Ankrd46	1110054N06Rik|AI314978|AI987733	ankyrin repeat domain 46	protein-coding
common_peak2-22878-21-23--0.0154732354549205-0.305650498375555	chr14	31336469	31337118	+	0	NA	3' UTR (NM_133761, exon 10 of 10)	3' UTR (NM_133761, exon 10 of 10)	-25524	NM_009388	21881	Mm.290692	NM_009388	ENSMUSG00000021957	Tkt	p68	transketolase	protein-coding
unique_peak1-4291-12-1-2.64877598508764-3.36932189928148	chr2	143901048	143901600	+	0	NA	Intergenic	RMER15|LTR|ERVL	42486	NM_207275	403171	Mm.389362	NM_207275	ENSMUSG00000037307	Banf2	4930517K23Rik|Baf-L|Baf-like|Gm115	barrier to autointegration factor 2	protein-coding
unique_peak1-2780-7-0-2.79909083029819-2.40823996531185	chr17	10556151	10556640	+	0	NA	Intergenic	Intergenic	38928	NR_045461	76634	Mm.491052	NR_045461		1700110C19Rik	-	RIKEN cDNA 1700110C19 gene	ncRNA
unique_peak2-34531-4-8--1.19338551529556-1.21878474469819	chr14	54876740	54877180	+	0	NA	intron (NM_001205181, intron 1 of 6)	intron (NM_001205181, intron 1 of 6)	-1947	NM_134076	105501	Mm.28771	NM_134076	ENSMUSG00000040997	Abhd4	1110035H23Rik|AI429574|Abh4	abhydrolase domain containing 4	protein-coding
unique_peak1-5696-10-3-1.35641534500877-1.75805390616669	chr6	34599549	34600048	+	0	NA	Intergenic	Intergenic	-59646	NM_145575	109624	Mm.308134	NM_145575	ENSMUSG00000029761	Cald1	4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik	caldesmon 1	protein-coding
common_peak2-19574-4-8--1.19338551529556-1.21878474469819	chr1	13659517	13659811	+	0	NA	intron (NM_001011873, intron 1 of 3)	intron (NM_001011873, intron 1 of 3)	812	NM_001011873	381246	Mm.311142	NM_001011873	ENSMUSG00000067813	Xkr9	Gm1620|XRG9	X Kell blood group precursor related family member 9 homolog	protein-coding
unique_peak2-34318-7-9--0.522837264589173-1.05908390183068	chr13	95781707	95782227	+	0	NA	intron (NM_172590, intron 8 of 12)	intron (NM_172590, intron 8 of 12)	35668	NM_172590	218460	Mm.33856	NM_172590	ENSMUSG00000042015	Wdr41	B830029I03Rik|MSTP048	WD repeat domain 41	protein-coding
common_peak2-20829-11-20--0.883623838527147-0.876666802405043	chr10	128695527	128696297	+	0	NA	Intergenic	Intergenic	-2107	NM_207559	404321	Mm.355212	NM_207559	ENSMUSG00000095483	Olfr776	MOR111-12	olfactory receptor 776	protein-coding
common_peak1-18607-30-29-0.262784813883354-0.465043498729215	chr8	107114203	107115517	+	0	NA	promoter-TSS (NM_001024606)	promoter-TSS (NM_001024606)	-508	NM_001024606	382051	Mm.290750	NM_001024606	ENSMUSG00000048371	Pdp2	4833426J09Rik|Gm1705|mKIAA1348	pyruvate dehyrogenase phosphatase catalytic subunit 2	protein-coding
unique_peak1-3278-14-3-1.89921616035764-2.80787975886178	chr18	73839511	73840131	+	0	NA	intron (NM_008540, intron 1 of 11)	intron (NM_008540, intron 1 of 11)	23574	NM_008540	17128	Mm.100399	NM_008540	ENSMUSG00000024515	Smad4	AW743858|D18Wsu70e|DPC4|Madh4	SMAD family member 4	protein-coding
unique_peak2-36638-2-6--1.72480917832092-1.26211192963361	chr3	7515162	7515513	+	0	NA	intron (NM_173181, intron 1 of 8)	intron (NM_173181, intron 1 of 8)	11911	NM_173181	67306	Mm.332366	NM_173181	ENSMUSG00000043542	Zc2hc1a	3110050N22Rik|AI790358|AU023959|Fam164a	zinc finger, C2HC-type containing 1A	protein-coding
unique_peak2-33955-2-7--1.91745425626332-1.45399745587252	chr12	78981577	78982060	+	0	NA	Intergenic	L1Md_T|LINE|L1	-345824	NM_172952	268566	Mm.341742	NM_145965	ENSMUSG00000047454	Gphn	5730552E08Rik|AI662856|BC027112|C230040D23|GPH|GPHRYN|geph	gephyrin	protein-coding
unique_peak1-3212-6-4-0.24347001549294-0.989110657569874	chr18	57230017	57230521	+	0	NA	Intergenic	L1_Mus4|LINE|L1	-62475	NM_001001979	70417	Mm.297863	NM_001001979	ENSMUSG00000024593	Megf10	3000002B06Rik|Gm331	multiple EGF-like-domains 10	protein-coding
common_peak1-16840-15-16--0.075298090694683-0.301029995663976	chr6	52012535	52013313	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-40024	NR_110440	102635415	Mm.333063	NR_110440		Halr1	Gm15055|Haunt|Linchoxa1|OTTMUSG00000018881|linc-Hoxa1	Hoxa adjacent long noncoding RNA 1	ncRNA
common_peak1-8081-10-13--0.450939577048835-0.386243247519795	chr1	179545772	179546211	+	0	NA	Intergenic	Intergenic	27083	NR_037994	75589	Mm.86666	NR_037994		2310043L19Rik	-	RIKEN cDNA 2310043L19 gene	ncRNA
unique_peak1-5182-9-4-0.867685311516858-1.36011389749466	chr5	30906556	30907037	+	0	NA	intron (NM_010608, intron 1 of 1)	intron (NM_010608, intron 1 of 1)	-15804	NR_040427	100502829	Mm.39944	NR_040427		Gm9899	ENSMUSG00000053214	predicted gene 9899	ncRNA
common_peak2-26683-9-7-0.18961340640422-1.05908390183068	chr2	124859036	124859516	+	0	NA	Intergenic	Intergenic	-34587	NM_175034	317750	Mm.330538	NM_175034	ENSMUSG00000035183	Slc24a5	F630045L20Rik|JSX|NCKX5|NCX5|Oca6	solute carrier family 24, member 5	protein-coding
common_peak2-24690-9-9--0.132314688483142-1.03275496310833	chr17	44543215	44543818	+	0	NA	Intergenic	Intergenic	217995	NM_172621	224796	Mm.37666	NM_172621	ENSMUSG00000023959	Clic5	5730531E12Rik|B330005L24|Gm322|jbg	chloride intracellular channel 5	protein-coding
common_peak2-21676-23-25-0.0213277863679888-0.30528805757448	chr11	103386320	103387485	+	0	NA	Intergenic	MTE2a|LTR|MaLR	89151	NM_001033434	380730	Mm.380214	NM_001033434	ENSMUSG00000034239	Gm884	LRRC37	predicted gene 884	protein-coding
common_peak1-19351-9-12--0.510826311736872-0.394412252720706	chrX	8892429	8892908	+	0	NA	Intergenic	PB1D9|SINE|Alu	31778	NM_029588	76383	Mm.440761	NM_029588	ENSMUSG00000096571	1700012L04Rik	H2al1	RIKEN cDNA 1700012L04 gene	protein-coding
unique_peak2-38684-2-9--2.23938235115068-1.87199725847353	chr7	100862857	100863405	+	0	NA	Intergenic	L1Md_T|LINE|L1	634742	NM_021427	58238	Mm.113787	NM_021427		Fam181b	A830059I20Rik|AB041569	family with sequence similarity 181, member B	protein-coding
common_peak1-15500-29-26-0.357402578451643-0.590428395010953	chr4	115784707	115785593	+	0	NA	intron (NM_001122959, intron 4 of 18)	intron (NM_001122959, intron 4 of 18)	11144	NM_009015	19366	Mm.3655	NM_009015	ENSMUSG00000028702	Rad54l	RAD54	RAD54 like (S. cerevisiae)	protein-coding
common_peak2-21948-13-11-0.193509529916613-0.379391706698377	chr12	31499857	31500468	+	0	NA	Intergenic	Intergenic	-69027	NM_001159743	100294583	Mm.399726	NM_001159743	ENSMUSG00000054204	Fam150b	6230419C23Rik	family with sequence similarity 150, member B	protein-coding
common_peak1-14702-83-141--0.235524494398556-0.632875226552809	chr3	69125808	69127830	+	0	NA	intron (NM_178726, intron 1 of 3)	intron (NM_178726, intron 1 of 3)	5979	NM_178726	242083	Mm.40577	NM_178726		Ppm1l	3222401G13|5930404J21Rik|AI481720|AW045850|PP2C|PP2Cepsilon|Pp2ce|Ppp2ce|mKIAA4175	protein phosphatase 1 (formerly 2C)-like	protein-coding
unique_peak1-5003-10-1-2.35641534500877-2.57096726280955	chr4	119124042	119124644	+	0	NA	intron (NM_001014900, intron 7 of 7)	MTD|LTR|MaLR	29054	NM_001014900	332934	Mm.388911	NM_001014900	ENSMUSG00000070806	Zmynd12	AI414736	zinc finger, MYND domain containing 12	protein-coding
common_peak1-10533-37-77--0.75940914737643-2.01603685092126	chr14	14345767	14346829	+	0	NA	intron (NM_001163032, intron 2 of 4)	B2_Mm1t|SINE|B2	59826	NM_001163032	72003	Mm.317515	NM_028052	ENSMUSG00000056296	Synpr	1500003F20Rik|SPO	synaptoporin	protein-coding
unique_peak1-2769-14-8-0.729291158915332-0.771068449301682	chr17	6117694	6118520	+	0	NA	intron (NM_001103181, intron 1 of 13)	intron (NM_001103181, intron 1 of 13)	11277	NM_001103181	68842	Mm.449307	NM_054040	ENSMUSG00000034377	Tulp4	1110057P05Rik|2210038L17Rik|Tusp	tubby like protein 4	protein-coding
unique_peak1-3768-16-1-3.11826364226806-4.46429741251234	chr19	55264700	55265574	+	0	NA	intron (NM_009348, intron 6 of 9)	intron (NM_009348, intron 6 of 9)	-2031	NR_106146	102465990		NR_106146		Mir6715	mmu-mir-6715	microRNA mir-6715	ncRNA
unique_peak2-32865-6-11--1.01956439034085-1.32595962126035	chr10	4346555	4347042	+	0	NA	Intergenic	Intergenic	-77343	NM_001161822	56533	Mm.44606	NM_019958	ENSMUSG00000019775	Rgs17	6430507P11Rik|Rgsz2	regulator of G-protein signaling 17	protein-coding
common_peak2-21415-10-10--0.103016273628528-0.301029995663987	chr11	83877942	83878325	+	0	NA	intron (NM_019819, intron 1 of 2)	B3|SINE|B2	3726	NM_019819	56405	Mm.240885	NM_019819	ENSMUSG00000018648	Dusp14	1110014C10Rik|2310042C07Rik|D11Ertd395e|MKP-L|Mkp6	dual specificity phosphatase 14	protein-coding
unique_peak2-34810-5-6--0.511735258063458-0.947717972411649	chr15	73536156	73536481	+	0	NA	intron (NM_173365, intron 1 of 1)	intron (NM_173365, intron 1 of 1)	1617	NM_173365	239530	Mm.122997	NM_173365	ENSMUSG00000045281	Gpr20	A430106B11Rik	G protein-coupled receptor 20	protein-coding
unique_peak2-38119-1-18--3.87498452366033-4.7418463123268	chr6	73292812	73293476	+	0	NA	Intergenic	Intergenic	94645	NM_019879	56451	Mm.29845	NM_019879	ENSMUSG00000052738	Suclg1	1500000I01Rik|Sucla1	succinate-CoA ligase, GDP-forming, alpha subunit	protein-coding
common_peak2-21631-12-13--0.158578936969966-0.301029995663979	chr11	101087118	101087756	+	0	NA	intron (NM_007970, intron 1 of 20)	CpG	327	NM_007970	14055	Mm.5027	NM_007970	ENSMUSG00000006920	Ezh1	AW557915|mKIAA0388	enhancer of zeste homolog 1 (Drosophila)	protein-coding
common_peak2-19874-41-49-0.0572925150739358-0.320382596085891	chr1	93444969	93445775	+	0	NA	intron (NM_001039126, intron 3 of 4)	ORR1A2|LTR|MaLR	7715	NM_023046	65247	Mm.234152	NM_023046	ENSMUSG00000026311	Asb1	1700029O08Rik|1700054C17Rik|AI426616|AI851378|mKIAA1146	ankyrin repeat and SOCS box-containing 1	protein-coding
common_peak1-18142-13-56--2.05441798352697-6.16058890298723	chr8	11008049	11008792	+	0	NA	promoter-TSS (NM_001081212)	promoter-TSS (NM_001081212)	10	NM_001081212	384783	Mm.407207	NM_001081212	ENSMUSG00000038894	Irs2	Irs-2	insulin receptor substrate 2	protein-coding
unique_peak1-7058-9-2-1.60465090568306-1.87199725847353	chr9	3532803	3533282	+	0	NA	exon (NM_001033322, exon 1 of 8)	exon (NM_001033322, exon 1 of 8)	693	NM_001033322	234889	Mm.91240	NM_001033322		Gucy1a2	6330407I18Rik|A230060L24Rik	guanylate cyclase 1, soluble, alpha 2	protein-coding
unique_peak2-37832-6-8--0.60452689106201-1.03789460276074	chr5	131251114	131251593	+	0	NA	intron (NM_021371, intron 4 of 5)	intron (NM_021371, intron 4 of 5)	326691	NM_021371	140904	Mm.40875	NM_021371	ENSMUSG00000060371	Caln1	9630012C17Rik|Cabp8	calneuron 1	protein-coding
unique_peak2-35128-2-11--2.50241675698448-2.32232533660526	chr16	29977770	29978356	+	0	NA	intron (NR_037689, intron 1 of 5)	intron (NR_037689, intron 1 of 5)	1147	NR_037689	328657	Mm.425982	NM_001033403		Gm1968	-	predicted gene 1968	ncRNA
common_peak1-9715-17-3-2.21829633820504-3.11807310444576	chr12	31270410	31271254	+	0	NA	intron (NM_172049, intron 2 of 4)	intron (NM_172049, intron 2 of 4)	1524	NM_172049	211986	Mm.34035	NM_172049	ENSMUSG00000043061	Tmem18	BC024093	transmembrane protein 18	protein-coding
common_peak1-13936-10-8-0.186490343566457-1.078512453669	chr2	90501158	90501721	+	0	NA	Intergenic	Intergenic	-15933	NM_021512	59015	Mm.24532	NM_021512	ENSMUSG00000051329	Nup160	160kDa|2810011M03Rik|AA414952|AU020188|Gtl-13|Gtl1-13|Gtl13|mKIAA0197	nucleoporin 160	protein-coding
common_peak2-27099-50-77--0.244461902383296-0.484951602153905	chr3	144719187	144720550	+	0	NA	Intergenic	L1Md_T|LINE|L1	-24128	NM_017474	23844	Mm.33483	NM_017474	ENSMUSG00000028255	Clca3	Clca1|Clca2|gob-5|gob5	chloride channel calcium activated 3	protein-coding
common_peak2-25853-32-48--0.335617824895548-0.503563708672202	chr19	42170521	42171272	+	0	NA	intron (NM_145501, intron 1 of 8)	B3|SINE|B2	5971	NM_145501	84095	Mm.117037	NM_145501	ENSMUSG00000025178	Pi4k2a	Pi4k2	phosphatidylinositol 4-kinase type 2 alpha	protein-coding
common_peak1-19256-22-17-0.477359103645092-0.633951497070961	chr9	110683081	110683903	+	0	NA	Intergenic	Intergenic	-17197	NM_153099	235628	Mm.292285	NM_153099	ENSMUSG00000044664	Prss42	Tessp2	protease, serine 42	protein-coding
common_peak1-8585-50-139--1.08834270046601-6.07159457143302	chr10	99261023	99262873	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-39656	NM_027945	71832	Mm.483162	NM_027945	ENSMUSG00000046934	Csl	1700007H16Rik	citrate synthase like	protein-coding
common_peak2-21928-9-7-0.18961340640422-1.05908390183068	chr12	21373772	21374199	+	0	NA	intron (NR_120376, intron 1 of 18)	intron (NR_120376, intron 1 of 18)	5508	NR_102380	11491	Mm.27681	NM_009615	ENSMUSG00000052593	Adam17	CD156b|Tace	a disintegrin and metallopeptidase domain 17	protein-coding
common_peak1-11679-50-50-0.368514974507457-0.781782704927518	chr16	29813466	29814682	+	0	NA	Intergenic	CpG	165136	NR_037689	328657	Mm.425982	NM_001033403		Gm1968	-	predicted gene 1968	ncRNA
unique_peak2-33580-3-6--1.22133801201688-1.08602067057793	chr11	86626254	86626654	+	0	NA	Intergenic	MMVL30-int|LTR|ERV1	-5292	NM_026191	67487	Mm.260627	NM_026191	ENSMUSG00000018425	Dhx40	2410016C14Rik|ARG147|DDX40|PAD	DEAH (Asp-Glu-Ala-His) box polypeptide 40	protein-coding
common_peak2-32091-11-9-0.186765489364251-0.344532117358383	chr9	96952862	96953395	+	0	NA	Intergenic	Intergenic	-34354	NM_145134	211949	Mm.491271	NM_145134	ENSMUSG00000046997	Spsb4	D030068E18Rik|SSB-4|Ssb4	splA/ryanodine receptor domain and SOCS box containing 4	protein-coding
common_peak1-10242-18-19--0.00900894365901106-0.306598483909153	chr13	54468217	54468985	+	0	NA	Intergenic	Intergenic	-4112	NM_009946	12890	Mm.268902	NM_009946	ENSMUSG00000025867	Cplx2	921-L|AI413745|AW492120	complexin 2	protein-coding
common_peak2-31151-12-18--0.599151528355947-0.476916024233333	chr8	41348553	41349119	+	0	NA	Intergenic	Lx7|LINE|L1	23471	NM_030610	80857	Mm.425526	NM_030610	ENSMUSG00000031603	Fgf20	-	fibroblast growth factor 20	protein-coding
common_peak2-20193-16-18--0.129663871175524-0.307235046933848	chr1	173879476	173880269	+	0	NA	Intergenic	Intergenic	32204	NM_030710	30925	Mm.486404	NM_030710	ENSMUSG00000015314	Slamf6	KAL1|KAL1b|Ly108|NTB-A|NTBA|SF2000	SLAM family member 6	protein-coding
common_peak2-30378-21-36--0.639964100362715-0.825714541185117	chr7	28962404	28963300	+	0	NA	intron (NM_007991, intron 6 of 8)	intron (NM_007991, intron 6 of 8)	-1650	NM_001037957	13549	Mm.57249	NM_010092	ENSMUSG00000002409	Dyrk1b	Mirk	dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b	protein-coding
unique_peak2-36612-4-14--1.93035110946177-2.23384849113406	chr2	180257472	180258101	+	0	NA	intron (NM_018766, intron 1 of 3)	C-rich|Low_complexity|Low_complexity	23105	NM_018766	18216	Mm.301712	NM_018766	ENSMUSG00000027568	Ntsr1	NT-1R|NTR-1|NTR1	neurotensin receptor 1	protein-coding
common_peak1-11213-7-4-0.477162735410827-1.09384600808989	chr15	78878100	78878465	+	0	NA	Intergenic	ID_B1|SINE|B4	5967	NM_015738	14429	Mm.390805	NM_015738	ENSMUSG00000006378	Galr3	Galnr3	galanin receptor 3	protein-coding
unique_peak2-33375-6-13--1.2419568116773-1.58711810488664	chr11	40790576	40791174	+	0	NA	Intergenic	Intergenic	-222087	NM_009831	12450	Mm.2103	NM_009831	ENSMUSG00000020326	Ccng1	AI314029	cyclin G1	protein-coding
common_peak2-26024-12-7-0.648775985087639-0.697979855752659	chr19	59878976	59879335	+	0	NA	Intergenic	Intergenic	140112	NM_001033172	74998	Mm.24167	NM_001033172	ENSMUSG00000040022	Rab11fip2	4930470G04Rik|A830046J09Rik|AW558126|Nrip11	RAB11 family interacting protein 2 (class I)	protein-coding
unique_peak2-37585-1-9--2.94898510510411-2.31132995230379	chr5	38023025	38023477	+	0	NA	intron (NM_022416, intron 2 of 11)	Lx7|LINE|L1	85141	NM_022416	64293	Mm.103714	NM_022416	ENSMUSG00000029123	Stk32b	2510009F08Rik|STKG6|Stk32|YANK2	serine/threonine kinase 32B	protein-coding
unique_peak1-3719-11-2-1.92373108353046-2.32232533660526	chr19	46041609	46042138	+	0	NA	intron (NM_198296, intron 5 of 25)	intron (NM_198296, intron 5 of 25)	31105	NM_198296	71617	Mm.210949	NM_198296	ENSMUSG00000039901	9130011E15Rik	AI431055|AW050122	RIKEN cDNA 9130011E15 gene	protein-coding
common_peak2-25033-7-8--0.370834171144123-1.00793137938329	chr18	25644541	25644965	+	0	NA	intron (NM_001146294, intron 12 of 12)	intron (NM_001146294, intron 12 of 12)	267731	NM_133195	108013	Mm.266435	NM_133195	ENSMUSG00000024268	Celf4	A230070D14Rik|BRUNOL-4|Brul4|Brunol4|C130060B05Rik	CUGBP, Elav-like family member 4	protein-coding
common_peak2-28378-19-35--0.767237674780626-1.06916698217164	chr4	138325559	138326423	+	0	NA	Intergenic	Intergenic	-5659	NM_011109	18782	Mm.71913	NM_011109	ENSMUSG00000041202	Pla2g2d	Splash|mGIID	phospholipase A2, group IID	protein-coding
common_peak2-25946-94-147--0.0798637977796339-0.338107591505897	chr19	47313772	47316153	+	0	NA	exon (NM_001163480, exon 3 of 6)	exon (NM_001163480, exon 3 of 6)	11629	NM_001163480	18011	Mm.313651	NM_021360	ENSMUSG00000006435	Neurl1a	2410129E16Rik|AI450910|AI481072|Neu1|Neur1|Neurl|Neurl1|Nlz|Rnf67	neuralized homolog 1A (Drosophila)	protein-coding
common_peak1-16552-25-18-0.613922391901521-0.86528749982161	chr5	144904628	144905649	+	0	NA	intron (NM_001081109, intron 4 of 13)	intron (NM_001081109, intron 4 of 13)	43833	NM_001081109	231876	Mm.288726	NM_001081109	ENSMUSG00000038970	Lmtk2	2900041G10Rik|A330101P12Rik|BREK|KPI-2|KPI2|aatyk2|cprk	lemur tyrosine kinase 2	protein-coding
common_peak1-18288-12-7-0.648775985087639-0.697979855752659	chr8	44092477	44093258	+	0	NA	Intergenic	L1Md_A|LINE|L1	133973	NM_177742	244448	Mm.64542	NM_177742	ENSMUSG00000031651	Triml1	4933403D14|BC050188	tripartite motif family-like 1	protein-coding
unique_peak1-1877-9-1-2.18961340640422-2.31132995230379	chr14	60366104	60366605	+	0	NA	intron (NM_015803, intron 32 of 35)	intron (NM_015803, intron 32 of 35)	122236	NM_145463	219134	Mm.275409	NM_145463	ENSMUSG00000044461	Shisa2	9430059P22Rik|MAd2|Tmem46|mShisa|shisa	shisa homolog 2 (Xenopus laevis)	protein-coding
common_peak1-18942-9-5-0.604650905683064-1.21398586181642	chr9	48406076	48406479	+	0	NA	intron (NM_010924, intron 2 of 2)	intron (NM_010924, intron 2 of 2)	6905	NM_010924	18113	Mm.8362	NM_010924	ENSMUSG00000032271	Nnmt	-	nicotinamide N-methyltransferase	protein-coding
unique_peak1-4181-8-8--0.164702583494742-1.00793137938329	chr2	113641420	113641915	+	0	NA	intron (NM_009162, intron 2 of 5)	intron (NM_009162, intron 2 of 5)	27581	NM_009162	20394	Mm.4836	NM_009162	ENSMUSG00000023236	Scg5	7B2|AI325031|Sgne-1|Sgne1	secretogranin V	protein-coding
unique_peak1-6838-21-4-2.24756117037887-3.74275476306371	chr8	81767115	81768054	+	0	NA	intron (NM_026315, intron 1 of 5)	L1MC3|LINE|L1	4898	NM_026315	67687	Mm.178707	NM_026315	ENSMUSG00000031682	1700011L22Rik	-	RIKEN cDNA 1700011L22 gene	protein-coding
unique_peak2-38670-5-12--1.40482005414695-1.62698961692433	chr7	99027039	99027648	+	0	NA	intron (NM_011807, intron 5 of 22)	Lx2|LINE|L1	-183561	NM_001243046	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
unique_peak2-34191-2-6--1.72480917832092-1.26211192963361	chr13	37620387	37620723	+	0	NA	Intergenic	MTC|LTR|MaLR	183341	NM_010745	17084	Mm.2639	NM_010745	ENSMUSG00000021423	Ly86	MD-1|MD1	lymphocyte antigen 86	protein-coding
common_peak1-8365-33-61--0.622858747861346-1.25612039445446	chr10	59879422	59880337	+	0	NA	intron (NR_045556, intron 22 of 68)	intron (NR_045556, intron 22 of 68)	17405	NM_001164374	100302688	Mm.444135	NM_001164374	ENSMUSG00000090439	Gm17455	-	predicted gene, 17455	protein-coding
unique_peak1-1529-8-1-2.00522241794757-2.05605744720049	chr13	14612471	14612998	+	0	NA	intron (NM_001081348, intron 1 of 28)	intron (NM_001081348, intron 1 of 28)	2759	NM_001081348	94253	Mm.125298	NM_153130	ENSMUSG00000021301	Hecw1	9330116H24Rik|AV273951|E130207I19Rik|Nedl1	HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	protein-coding
unique_peak2-38134-6-7--0.434601889619698-0.97990265578305	chr6	84228836	84229272	+	0	NA	Intergenic	Intergenic	144778	NR_046063	100038556	Mm.387783	NR_046063		Gm10445	ENSMUSG00000072956	predicted gene 10445	ncRNA
common_peak1-9065-35-87--1.02806136017479-3.59961219983479	chr11	69088094	69089285	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-38165	NM_008192	14919	Mm.291816	NM_008192	ENSMUSG00000020890	Gucy2e	GC-E|GC1|ROS-GC1	guanylate cyclase 2e	protein-coding
common_peak1-17476-16-19--0.203664452619301-0.325169893479371	chr7	24207531	24208396	+	0	NA	intron (NM_001039143, intron 8 of 14)	intron (NM_001039143, intron 8 of 14)	37047	NM_011860	23968	Mm.333653	NM_011860	ENSMUSG00000015721	Nlrp5	Mater|Nalp5|Op1|PAN11	NLR family, pyrin domain containing 5	protein-coding
common_peak2-28292-47-42-0.50857667006445-1.06647553678992	chr4	130663178	130664241	+	0	NA	Intergenic	LTR41|LTR|ERVL	163409	NM_010769	17180	Mm.271796	NM_010769	ENSMUSG00000040533	Matn1	CMP|Crtm|Mat1|matrilin-1	matrilin 1, cartilage matrix protein	protein-coding
common_peak2-25341-25-34--0.26743311159986-0.387290225425543	chr18	77773919	77774798	+	0	NA	intron (NM_001164504, intron 1 of 7)	intron (NM_001164504, intron 1 of 7)	29517	NM_001164504	225743	Mm.23293	NM_001164504	ENSMUSG00000025427	Rnf165	2900024M11Rik|AI427432|Ark2c|G630064H08Rik|Gm96	ring finger protein 165	protein-coding
common_peak2-30645-20-10-1.0286431659539-1.30248952876293	chr7	98655891	98656560	+	0	NA	intron (NM_011807, intron 2 of 22)	intron (NM_011807, intron 2 of 22)	416929	NM_011807	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
unique_peak1-2880-10-2-1.77145284428761-2.09384600808989	chr17	36843718	36844190	+	0	NA	Intergenic	Intergenic	-34812	NM_177636	224756	Mm.246583	NM_177636	ENSMUSG00000037334	H2-M1	H-2M1|H2-Qa-Mb1|Mb1	histocompatibility 2, M region locus 1	protein-coding
common_peak1-7617-52-76--0.158526550429202-0.374439317080688	chr1	60180445	60181418	+	0	NA	intron (NM_001285463, intron 5 of 17)	intron (NM_001285463, intron 5 of 17)	16004	NR_104344	241066	Mm.276441	NM_139150	ENSMUSG00000026017	Carf	Als2cr8|ECBRC-FC1|ECBRC-FC2	calcium response factor	protein-coding
unique_peak2-38989-3-8--1.58390809140159-1.39487600375387	chr8	44094013	44094425	+	0	NA	Intergenic	L1Md_A|LINE|L1	132621	NM_177742	244448	Mm.64542	NM_177742	ENSMUSG00000031651	Triml1	4933403D14|BC050188	tripartite motif family-like 1	protein-coding
unique_peak1-1530-6-0-2.5653981103803-2.10720996964787	chr13	15862318	15862845	+	0	NA	Intergenic	Intergenic	31882	NR_045507	71071	Mm.380845	NR_045507		4933412O06Rik	-	RIKEN cDNA 4933412O06 gene	ncRNA
common_peak2-21261-14-8-0.729291158915332-0.771068449301682	chr11	69581052	69581493	+	0	NA	intron (NM_029348, intron 1 of 3)	intron (NM_029348, intron 1 of 3)	1858	NM_029348	75580	Mm.426361	NM_029348	ENSMUSG00000018750	Zbtb4	2310026P19Rik|9230111I22Rik|mKIAA1538	zinc finger and BTB domain containing 4	protein-coding
unique_peak1-6514-9-3-1.18961340640422-1.57096726280955	chr7	118250744	118251226	+	0	NA	Intergenic	Intergenic	15204	NR_015573	75479	Mm.381620	NR_015573		1700012D14Rik	-	RIKEN cDNA 1700012D14 gene	ncRNA
unique_peak1-6444-11-2-1.92373108353046-2.32232533660526	chr7	99131963	99132513	+	0	NA	intron (NM_011807, intron 9 of 22)	(TATATG)n|Simple_repeat|Simple_repeat	-78666	NM_001243046	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
unique_peak1-3315-8-3-1.00522241794757-1.39487600375387	chr18	79193325	79193787	+	0	NA	intron (NM_053099, intron 2 of 5)	intron (NM_053099, intron 2 of 5)	112574	NM_053099	240427	Mm.312871	NM_053099	ENSMUSG00000024548	Setbp1	C130092E12|Seb|mKIAA0437	SET binding protein 1	protein-coding
unique_peak2-36293-7-12--0.901348887842903-1.31827279259406	chr2	71453320	71453706	+	0	NA	Intergenic	L1MB7|LINE|L1	-68702	NM_010054	13392	Mm.3896	NM_010054	ENSMUSG00000023391	Dlx2	AW121999|Dlx-2|Tes-1	distal-less homeobox 2	protein-coding
common_peak2-31066-28-19-0.7310310249341-1.12969433525548	chr8	22491626	22492419	+	0	NA	Intergenic	L1VL1|LINE|L1	-25323	NM_007844	13218	Mm.304264	NM_007844	ENSMUSG00000074437	Defa-rs1	2010300L12Rik|2010319H24Rik|CRS1C|CRS1C-2|CRS1C-5|Defcr-rs1	defensin, alpha, related sequence 1	protein-coding
common_peak1-15720-10-24--1.28744084476596-1.59083646988122	chr4	141425628	141426292	+	0	NA	intron (NM_025994, intron 1 of 3)	intron (NM_025994, intron 1 of 3)	4875	NM_025994	27984	Mm.395598	NM_025994	ENSMUSG00000040659	Efhd2	2600015J22Rik|AA408606|D4Wsu27e	EF hand domain containing 2	protein-coding
common_peak1-14815-18-22--0.210642804828661-0.321718508207525	chr3	90525924	90526780	+	0	NA	Intergenic	Intergenic	-4476	NM_001165968	384997	Mm.316644	NM_207263	ENSMUSG00000042250	Pglyrp4	Gm1478|Gm413	peptidoglycan recognition protein 4	protein-coding
common_peak2-29532-60-60-0.423554524057645-1.04415539603865	chr6	38433876	38434866	+	0	NA	intron (NM_177185, intron 12 of 16)	B1_Mur3|SINE|Alu	-22954	NR_106130	102466843		NR_106130		Mir7670	mmu-mir-7670	microRNA mir-7670	ncRNA
common_peak1-15984-53-20-1.74865558963717-6.88193557220074	chr5	32190021	32192315	+	0	NA	intron (NM_181281, intron 5 of 10)	intron (NM_181281, intron 5 of 10)	190745	NM_181282	107976	Mm.482126	NM_144541	ENSMUSG00000052139	Bre	6030405P19Rik|AI429776|B830038C02Rik	brain and reproductive organ-expressed protein	protein-coding
common_peak2-24437-134-202-0.0792335915942486-0.376206776100133	chr17	21531438	21533269	+	0	NA	intron (NM_172486, intron 3 of 3)	Lx5|LINE|L1	11641	NM_172486	210503	Mm.33443	NM_172486	ENSMUSG00000062743	Zfp677	A830058L05Rik|Tce8	zinc finger protein 677	protein-coding
unique_peak2-33628-3-8--1.58390809140159-1.39487600375387	chr11	97699112	97699570	+	0	NA	3' UTR (NM_010688, exon 7 of 7)	3' UTR (NM_010688, exon 7 of 7)	-2753	NM_001080935	68127	Mm.110270	NM_001080935	ENSMUSG00000089676	B230217C12Rik	AI840637	RIKEN cDNA B230217C12 gene	protein-coding
unique_peak1-5015-7-1-1.79909083029819-1.80617997398389	chr4	125279046	125279566	+	0	NA	intron (NM_001081097, intron 1 of 15)	Tigger5|DNA|MER2_type	97313	NR_035409	100124641		NR_035409		Mir692-2b	Mirn692-2b	microRNA 692-2b	ncRNA
unique_peak1-3446-7-2-1.21412832957703-1.45399745587252	chr19	7335662	7336142	+	0	NA	Intergenic	Intergenic	-8352	NM_054048	104383	Mm.283859	NM_054048	ENSMUSG00000024968	Rcor2	1A13|AW122124|CoREST|Rcor|Rcor1	REST corepressor 2	protein-coding
common_peak2-22271-17-18--0.0296311752385474-0.306899554715732	chr13	6605839	6606705	+	0	NA	intron (NM_001291071, intron 8 of 21)	intron (NM_001291071, intron 8 of 21)	41745	NM_019703	56421	Mm.273874	NM_019703	ENSMUSG00000021196	Pfkp	1200015H23Rik|9330125N24Rik|ATP-PFK|PFK-C|PFK-P	phosphofructokinase, platelet	protein-coding
common_peak1-13407-42-33-0.654866486616845-1.41268768702114	chr19	47869263	47870616	+	0	NA	intron (NM_027559, intron 11 of 37)	intron (NM_027559, intron 11 of 37)	41912	NM_027559	100048534	Mm.29457	NM_027559	ENSMUSG00000044948	Cfap43	4632415N18Rik|4930428C11Rik|4930463G05Rik|AI429486|D19Ertd652e|Wdr96	cilia and flagella associated protein 43	protein-coding
common_peak2-25361-14-11-0.314253659636488-0.435191258261915	chr18	81033411	81033982	+	0	NA	intron (NM_001201569, intron 10 of 29)	ID4|SINE|ID	97101	NM_001201569	50771	Mm.247138	NM_015805	ENSMUSG00000024566	Atp9b	AA934181|Atpc2b|IIb|MMR	ATPase, class II, type 9B	protein-coding
unique_peak1-5411-17-2-2.63333383748388-3.75443312462699	chr5	107966086	107966791	+	0	NA	intron (NM_175241, intron 1 of 6)	intron (NM_175241, intron 1 of 6)	2708	NM_175241	76421	Mm.67037	NM_175241	ENSMUSG00000089798	1700028K03Rik	-	RIKEN cDNA 1700028K03 gene	protein-coding
unique_peak2-33532-10-7-0.356415345008769-1.12966497611638	chr11	77159839	77160241	+	0	NA	intron (NM_177710, intron 2 of 14)	intron (NM_177710, intron 2 of 14)	-1742	NM_001291190	237860	Mm.440381	NM_177710	ENSMUSG00000037926	Ssh2	SSH-2|SSH-2L|mSSH-2L	slingshot homolog 2 (Drosophila)	protein-coding
common_peak2-32343-11-8-0.338768582809301-1.14218153353838	chrX	75735245	75735753	+	0	NA	intron (NM_027322, intron 2 of 3)	intron (NM_027322, intron 2 of 3)	93645	NM_001164275	546336	Mm.211712	NM_027322	ENSMUSG00000047996	Prrg1	2010007L08Rik	proline rich Gla (G-carboxyglutamic acid) 1	protein-coding
common_peak1-17674-21-11-0.984526764545079-1.3750876294627	chr7	65822367	65823354	+	0	NA	Intergenic	Intergenic	-90712	NM_009728	11982	Mm.135129	NM_009728	ENSMUSG00000025324	Atp10a	Atp10c|pfatp	ATPase, class V, type 10A	protein-coding
common_peak1-12574-27-45--0.532016005161777-0.779916249636879	chr18	11839031	11840357	+	0	NA	intron (NR_045526, intron 4 of 17)	L1VL2|LINE|L1	23836	NM_001081223	225182	Mm.154275	NM_175458	ENSMUSG00000041238	Rbbp8	9930104E21Rik|CtIP|RBBP-8|RIM|SAE2	retinoblastoma binding protein 8	protein-coding
unique_peak1-6408-8-2-1.42025991722641-1.65811743852845	chr7	80865081	80865596	+	0	NA	Intergenic	Intergenic	-19855	NM_001162532	100038347	Mm.425464	NM_001162532	ENSMUSG00000078670	Fam174b	-	family with sequence similarity 174, member B	protein-coding
unique_peak2-34532-4-13--1.83081543591085-2.04196296489515	chr14	55015567	55016138	+	0	NA	intron (NM_001253680, intron 2 of 9)	(TG)n|Simple_repeat|Simple_repeat	12457	NM_001253680	20540	Mm.142455	NM_011405	ENSMUSG00000000958	Slc7a7	AI790233|my+lat1	solute carrier family 7 (cationic amino acid transporter, y+ system), member 7	protein-coding
common_peak2-29774-119-170-0.120585406244146-0.457233432536808	chr6	88044122	88045928	+	0	NA	intron (NM_133933, intron 4 of 9)	intron (NM_133933, intron 4 of 9)	9227	NR_105795	102465196		NR_105795	miRBase:MI0021905	Mir6376	mmu-mir-6376	microRNA mir-6376	ncRNA
common_peak1-17503-25-21-0.402418286707809-0.580176690544129	chr7	25658410	25659357	+	0	NA	intron (NM_027732, intron 3 of 8)	intron (NM_027732, intron 3 of 8)	3807	NM_027732	71241	Mm.66855	NM_027732	ENSMUSG00000011349	Dmrtc2	4933432E21Rik|Dmrt7	doublesex and mab-3 related transcription factor like family C2	protein-coding
common_peak1-8505-38-33-0.483989818048191-0.907712525274296	chr10	82353931	82355112	+	0	NA	intron (NM_001042514, intron 13 of 13)	intron (NM_001042514, intron 13 of 13)	25150	NM_025499	66341	Mm.443284	NM_025499		Eid3	1700027M21Rik|NS4EB	EP300 interacting inhibitor of differentiation 3	protein-coding
common_peak1-14213-15-8-0.842239749113344-0.891319708951327	chr2	151008658	151009352	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	85024	NM_001097977	433486	Mm.422661	NM_001097977	ENSMUSG00000079006	Gm14151	OTTMUSG00000015806	predicted gene 14151	protein-coding
unique_peak2-37380-3-7--1.41398308995928-1.23214870625617	chr4	139088083	139088514	+	0	NA	5' UTR (NM_183148, exon 3 of 12)	5' UTR (NM_183148, exon 3 of 12)	1835	NM_183148	212632	Mm.30464	NM_183148	ENSMUSG00000041025	Iffo2	C79267	intermediate filament family orphan 2	protein-coding
unique_peak1-905-8-2-1.42025991722641-1.65811743852845	chr11	40428916	40429442	+	0	NA	Intergenic	Intergenic	77005	NM_134017	108645	Mm.293771	NM_134017	ENSMUSG00000042032	Mat2b	1110064C04Rik|2410018D16Rik|AI182287|AU022853|MAT-II|MATIIbeta|TGR	methionine adenosyltransferase II, beta	protein-coding
common_peak2-23066-6-5--0.0195643903408542-0.947717972411649	chr14	73237559	73237973	+	0	NA	Intergenic	Intergenic	-127956	NM_207636	319448	Mm.205421	NM_207636	ENSMUSG00000033487	Fndc3a	1700094E19Rik|D14Ertd453e|F730017H24Rik|Fndc3|sys	fibronectin type III domain containing 3A	protein-coding
unique_peak2-34263-5-6--0.511735258063458-0.947717972411649	chr13	64248691	64249057	+	0	NA	intron (NM_175494, intron 1 of 4)	PB1D9|SINE|Alu	5633	NM_175494	238673	Mm.300065	NM_175494	ENSMUSG00000044934	Zfp367	8030486J21Rik|ZFF29a|ZFF29b|Znf367	zinc finger protein 367	protein-coding
common_peak1-9589-16-24--0.525592547506663-0.561823156887258	chr11	119125506	119126295	+	0	NA	3' UTR (NM_175430, exon 19 of 19)	3' UTR (NM_175430, exon 19 of 19)	-3381	NM_001159324	14387	Mm.4793	NM_008064	ENSMUSG00000025579	Gaa	E430018M07Rik	glucosidase, alpha, acid	protein-coding
common_peak2-31754-11-17--0.661231417190699-0.58239619684445	chr9	20644575	20645386	+	0	NA	Intergenic	MER91A|DNA|Tip100	22032	NM_001030290	235033	Mm.297661	NM_001030290	ENSMUSG00000053773	Rdh8	Gm182|prRDH	retinol dehydrogenase 8	protein-coding
unique_peak2-37453-5-13--1.51173525806346-1.78669045979184	chr5	64225055	64225769	+	0	NA	intron (NM_029554, intron 1 of 3)	intron (NM_029554, intron 1 of 3)	21678	NM_029554	76261	Mm.38143	NM_029554	ENSMUSG00000060512	0610040J01Rik	AI662686	RIKEN cDNA 0610040J01 gene	protein-coding
common_peak2-29837-10-12--0.344024373132323-0.340565874754526	chr6	94649896	94650366	+	0	NA	promoter-TSS (NM_008377)	promoter-TSS (NM_008377)	8	NM_008377	16206	Mm.245210	NM_008377	ENSMUSG00000030029	Lrig1	D6Bwg0781e|Img|LIG-1	leucine-rich repeats and immunoglobulin-like domains 1	protein-coding
common_peak1-9496-10-18--0.891512168434816-0.804350088532826	chr11	109610895	109611481	+	0	NA	Intergenic	MER2|DNA|MER2_type	-27618	NM_153782	208659	Mm.208662	NM_153782	ENSMUSG00000020614	Fam20a	AI606893	family with sequence similarity 20, member A	protein-coding
common_peak2-28440-13-21--0.680959587999529-0.607095980551316	chr4	149484539	149485178	+	0	NA	Intergenic	MTD|LTR|MaLR	-8595	NM_019741	56485	Mm.260220	NM_019741	ENSMUSG00000028976	Slc2a5	AI526984|Glut5|Slc5a	solute carrier family 2 (facilitated glucose transporter), member 5	protein-coding
unique_peak2-33142-4-8--1.19338551529556-1.21878474469819	chr10	84398429	84398842	+	0	NA	intron (NM_001013441, intron 2 of 8)	intron (NM_001013441, intron 2 of 8)	18277	NM_183172	237422	Mm.18936	NM_183172		Ric8b	BC051080|Ric-8|Ric-8b	resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)	protein-coding
common_peak2-20804-20-54--1.29328492893347-3.32003866131528	chr10	126978606	126980006	+	0	NA	exon (NM_008512, exon 79 of 89)	exon (NM_008512, exon 79 of 89)	-7691	NM_183297	104080	Mm.437200	NM_183297	ENSMUSG00000040258	Nxph4	1110036M10Rik|AI851051	neurexophilin 4	protein-coding
unique_peak1-4534-11-0-3.50869358425161-3.61235994796777	chr3	37366261	37366786	+	0	NA	intron (NM_001163511, intron 14 of 15)	intron (NM_001163511, intron 14 of 15)	47321	NM_021343	57815	Mm.172679	NM_021343	ENSMUSG00000027722	Spata5	2510048F20Rik|C78064|Spaf	spermatogenesis associated 5	protein-coding
common_peak1-8341-11-12--0.191746133889479-0.310474156842889	chr10	47454397	47455123	+	0	NA	Intergenic	Lx5|LINE|L1	1360889	NR_046212	100418235	Mm.185993	NR_046212		C130030K03Rik	-	proteasome (prosome, macropain) subunit, alpha type 6 pseudogene	pseudo
common_peak2-22995-30-38--0.115726809370376-0.312769113767451	chr14	57889475	57890397	+	0	NA	Intergenic	Intergenic	127384	NM_030004	68631	Mm.25539	NM_030004	ENSMUSG00000021947	Cryl1	1110025H08Rik|A230106J09Rik|C85932|gul3dh	crystallin, lambda 1	protein-coding
unique_peak1-6028-12-1-2.64877598508764-3.36932189928148	chr6	113462377	113462984	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-10755	NM_001289700	210673	Mm.133060	NM_172487	ENSMUSG00000045009	Prrt3	6330505P20|B230206N24Rik	proline-rich transmembrane protein 3	protein-coding
unique_peak2-33102-2-7--1.91745425626332-1.45399745587252	chr10	80702963	80703337	+	0	NA	intron (NM_001034895, intron 4 of 17)	B3|SINE|B2	7242	NM_001034895	103406	Mm.158783	NM_001034895	ENSMUSG00000034949	Zfr2	2010013I23Rik|9130206N08Rik|AW045600|mKIAA1086	zinc finger RNA binding protein 2	protein-coding
unique_peak2-39169-10-20--1.03590207776999-1.03889213727317	chr8	94602025	94602811	+	0	NA	Intergenic	Lx9|LINE|L1	-276865	NM_008393	16373	Mm.238044	NM_008393	ENSMUSG00000031734	Irx3	AI894186	Iroquois related homeobox 3	protein-coding
unique_peak2-38269-6-10--0.894033508256995-1.21398586181642	chr6	128437330	128437862	+	0	NA	intron (NM_007376, intron 30 of 35)	intron (NM_007376, intron 30 of 35)	39142	NM_007376	11287	Mm.260144	NM_007376	ENSMUSG00000030359	Pzp	A1m|A2m|AI893533|MAM	pregnancy zone protein	protein-coding
common_peak1-19205-10-8-0.186490343566457-1.078512453669	chr9	102992986	102993549	+	0	NA	Intergenic	Intergenic	-21137	NM_173781	270192	Mm.490252	NM_173781	ENSMUSG00000032549	Rab6b	9630015C03|AI844641|C330006L04Rik|D9Bwg0185e	RAB6B, member RAS oncogene family	protein-coding
common_peak1-13022-13-16--0.30899081061257-0.330004445983672	chr19	5430056	5430901	+	0	NA	Intergenic	Intergenic	5334	NM_001256515	107242	Mm.329658	NM_134149	ENSMUSG00000047423	AI837181	Bles03|N28173	expressed sequence AI837181	protein-coding
common_peak1-17833-38-79--0.750475435588832-1.96088648955617	chr7	109751773	109752865	+	0	NA	promoter-TSS (NM_147102)	promoter-TSS (NM_147102)	-551	NM_147102	259106	Mm.377848	NM_147102	ENSMUSG00000073973	Olfr552	MOR28-1	olfactory receptor 552	protein-coding
unique_peak1-863-6-2-0.980435609659146-1.26211192963361	chr11	21751403	21751929	+	0	NA	intron (NM_145425, intron 14 of 17)	L1M3|LINE|L1	149988	NM_011023	18423	Mm.129663	NM_011023	ENSMUSG00000005917	Otx1	A730044F23Rik|jv	orthodenticle homolog 1	protein-coding
common_peak1-11609-9-6-0.382258484346616-1.11707584880836	chr16	17938128	17938582	+	0	NA	Intergenic	Intergenic	-10043	NM_153150	13358	Mm.229291	NM_153150	ENSMUSG00000003528	Slc25a1	1300019P08Rik|2610100G11Rik|AI194714|Ctp|Dgsj|Slc20a3	solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1	protein-coding
common_peak1-17482-8-11--0.579740082773585-1.14218153353838	chr7	24463057	24463483	+	0	NA	Intergenic	Intergenic	19935	NM_030735	81010	Mm.379267	NM_030735	ENSMUSG00000035523	Vmn1r172	V1rd9|V3R9	vomeronasal 1 receptor 172	protein-coding
common_peak1-12962-41-29-0.794258109240142-1.7388889233551	chr19	3282093	3283474	+	0	NA	promoter-TSS (NM_172252)	promoter-TSS (NM_172252)	227	NM_009212	20589	Mm.3179	NM_009212		Ighmbp2	AEP|Catf1|RIPE3b1|Smbp-2|Smbp2|Smubp2|nmd|sma	immunoglobulin mu binding protein 2	protein-coding
common_peak2-29091-55-77--0.0807823477095466-0.313973398029927	chr5	121710890	121712393	+	0	NA	intron (NM_181421, intron 4 of 75)	intron (NM_181421, intron 4 of 75)	41413	NM_181421	269700	Mm.184589	NM_181421	ENSMUSG00000042744	Gm15800	A130010L24|AU042671|BC019639|EG545802|OTTMUSG00000026283|mKIAA0614	predicted gene 15800	protein-coding
unique_peak1-4288-17-6-1.41094141614743-1.84350559086818	chr2	143852177	143853075	+	0	NA	Intergenic	Intergenic	-6212	NM_001044750	403171	Mm.389362	NM_207275	ENSMUSG00000037307	Banf2	4930517K23Rik|Baf-L|Baf-like|Gm115	barrier to autointegration factor 2	protein-coding
common_peak2-23777-63-140--0.701238761328204-3.01306940132187	chr15	99029333	99031706	+	0	NA	intron (NM_139140, intron 9 of 12)	intron (NM_139140, intron 9 of 12)	-24888	NM_010601	16512	Mm.374793	NM_010601	ENSMUSG00000037579	Kcnh3	AU019351|C030044P22Rik|Elk2|Kv12.2|Melk2	potassium voltage-gated channel, subfamily H (eag-related), member 3	protein-coding
common_peak1-9632-9-1-2.18961340640422-2.31132995230379	chr12	17219549	17220041	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	-36101	NM_201531	382571	Mm.40173	NM_201531	ENSMUSG00000051726	Kcnf1	Gm1182|Kv5.1	potassium voltage-gated channel, subfamily F, member 1	protein-coding
common_peak2-31295-23-12-1.02132778636799-1.44787515926925	chr8	73135277	73135787	+	0	NA	Intergenic	CpG	-3319	NM_133772	76900	Mm.6667	NM_133772	ENSMUSG00000070003	Ssbp4	1210002E11Rik|AW743380|Sspb4	single stranded DNA binding protein 4	protein-coding
unique_peak2-39491-6-10--0.894033508256995-1.21398586181642	chr9	58698572	58699132	+	0	NA	intron (NM_001081192, intron 2 of 7)	intron (NM_001081192, intron 2 of 7)	27533	NM_001081192	330953	Mm.151967	NM_001081192	ENSMUSG00000032338	Hcn4	Bcng3|Hcn3	hyperpolarization-activated, cyclic nucleotide-gated K+ 4	protein-coding
common_peak2-20553-11-16--0.578769256998726-0.503257505534083	chr10	69351972	69352902	+	0	NA	intron (NM_170728, intron 16 of 40)	B3A|SINE|B2	-35843	NM_170687	11735	Mm.235960	NM_009670	ENSMUSG00000069601	Ank3	2900054D09Rik|AI314020|Ank-3|AnkG|Ankyrin-3|Ankyrin-G	ankyrin 3, epithelial	protein-coding
common_peak1-9248-24-28--0.0647710923598552-0.301029995663979	chr11	86623291	86624337	+	0	NA	Intergenic	Intergenic	-2652	NM_026191	67487	Mm.260627	NM_026191	ENSMUSG00000018425	Dhx40	2410016C14Rik|ARG147|DDX40|PAD	DEAH (Asp-Glu-Ala-His) box polypeptide 40	protein-coding
common_peak1-14696-112-274--0.670037508091739-5.2996052715558	chr3	68491893	68494438	+	0	NA	Intergenic	Intergenic	-1401	NM_001159424	16159	Mm.103783	NM_008351	ENSMUSG00000027776	Il12a	IL-12p35|Il-12a|Ll12a|p35	interleukin 12a	protein-coding
unique_peak2-37667-5-10--1.16381195464315-1.33892459842472	chr5	92967069	92967503	+	0	NA	Intergenic	ORR1B2|LTR|MaLR	-32652	NM_007644	12492	Mm.297964	NM_007644	ENSMUSG00000029426	Scarb2	9330185J12Rik|Cd36l2|LGP85|LIMP-2|MLGP85	scavenger receptor class B, member 2	protein-coding
common_peak2-24150-8-20--1.38709500483119-1.45476480588849	chr16	38346930	38347457	+	0	NA	exon (NM_001017429, exon 1 of 3)	exon (NM_001017429, exon 1 of 3)	108	NM_001017429	12856	Mm.27396	NM_001017429	ENSMUSG00000046516	Cox17	AI037035	cytochrome c oxidase assembly protein 17	protein-coding
common_peak2-21519-15-9-0.690236655668294-0.732381977911291	chr11	94403710	94404220	+	0	NA	intron (NM_001013381, intron 8 of 8)	intron (NM_001013381, intron 8 of 8)	6556	NM_001013381	237926	Mm.342275	NM_001013381	ENSMUSG00000039096	Rsad1	B430319G23|BC056485	radical S-adenosyl methionine domain containing 1	protein-coding
unique_peak1-1653-11-2-1.92373108353046-2.32232533660526	chr13	59767122	59767765	+	0	NA	intron (NM_001035122, intron 1 of 9)	intron (NM_001035122, intron 1 of 9)	9702	NM_001035122	105348	Mm.171335	NM_027307	ENSMUSG00000021556	Golm1	2310001L02Rik|AW125446|D030064E01Rik|GP73|Golph2|PSEC0257	golgi membrane protein 1	protein-coding
common_peak1-10831-24-30--0.160986407619158-0.316008636696545	chr14	101840989	101841927	+	0	NA	TTS (NM_001081278)	TTS (NM_001081278)	166950	NM_001081278	210789	Mm.320639	NM_173380	ENSMUSG00000033083	Tbc1d4	5930406J04Rik|A930035N22|AV295684|As160	TBC1 domain family, member 4	protein-coding
common_peak2-23122-11-18--0.739233929191972-0.671582559449692	chr14	99299561	99300351	+	0	NA	Intergenic	Intergenic	145399	NM_175245	76789	Mm.38912	NM_175245	ENSMUSG00000033186	Mzt1	2410129H14Rik|AI120158|Mozart1	mitotic spindle organizing protein 1	protein-coding
common_peak1-16295-38-31-0.57145265929853-1.10165134406427	chr5	113157642	113158924	+	0	NA	intron (NM_028901, intron 39 of 43)	(TCTA)n|Simple_repeat|Simple_repeat	-64029	NR_040675	67360	Mm.59218	NR_040675	ENSMUSG00000098230	1700095B10Rik	-	RIKEN cDNA 1700095B10 gene	ncRNA
unique_peak2-39877-4-7--1.02346051385325-1.09384600808989	chrX	74282718	74283100	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-434646	NM_001201395	74987	Mm.107996	NM_001201395	ENSMUSG00000079525	4930468A15Rik	-	RIKEN cDNA 4930468A15 gene	protein-coding
unique_peak1-2321-11-2-1.92373108353046-2.32232533660526	chr15	83170105	83170618	+	0	NA	intron (NM_025445, intron 2 of 15)	L1M4|LINE|L1	10316	NM_025445	66251	Mm.258910	NM_025445	ENSMUSG00000054277	Arfgap3	0610009H19Rik|1810004P07Rik|1810035F16Rik|9130416J18Rik|Arfgap1	ADP-ribosylation factor GTPase activating protein 3	protein-coding
unique_peak2-36522-3-6--1.22133801201688-1.08602067057793	chr2	163212067	163212378	+	0	NA	intron (NM_001205076, intron 2 of 6)	intron (NM_001205076, intron 2 of 6)	11487	NM_021566	59091	Mm.34459	NM_021566	ENSMUSG00000017817	Jph2	1110002E14Rik|JP-2|Jp2	junctophilin 2	protein-coding
common_peak1-17623-26-44--0.563954004171213-0.879657821688435	chr7	45680186	45681254	+	0	NA	Intergenic	Intergenic	839184	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak1-7425-18-0-4.31291915122835-NA	chrX	162566614	162567244	+	0	NA	Intergenic	RLTR10-int|LTR|ERVK	-41483	NM_146238	237221	Mm.209490	NM_146238	ENSMUSG00000040621	Gemin8	B130034M20Rik|B930082C09Rik|BC023488|gemin-8	gem (nuclear organelle) associated protein 8	protein-coding
unique_peak2-37828-6-10--0.894033508256995-1.21398586181642	chr5	130168755	130169353	+	0	NA	intron (NM_172462, intron 1 of 2)	intron (NM_172462, intron 1 of 2)	6909	NM_172462	22648	Mm.135067	NM_172462	ENSMUSG00000051034	Zfp11	6720465D24|Krox-6|Zfp-11	zinc finger protein 11	protein-coding
unique_peak2-36263-7-8--0.370834171144123-1.00793137938329	chr2	59438080	59438541	+	0	NA	Intergenic	Intergenic	-11789	NM_198294	66860	Mm.27917	NM_198294	ENSMUSG00000035168	Tanc1	1200003E16Rik|Tanc|mKIAA1728	tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1	protein-coding
common_peak2-26782-34-34-0.2527855100563-0.484230028934922	chr2	144599921	144600493	+	0	NA	Intergenic	Intergenic	-49195	NM_025490	66328	Mm.45377	NM_025490	ENSMUSG00000027431	Scp2d1	1700010M22Rik	SCP2 sterol-binding domain containing 1	protein-coding
common_peak2-21932-24-27--0.0141450192898871-0.304978344874324	chr12	24830809	24831564	+	0	NA	Intergenic	Intergenic	-49052	NM_001256489	66808	Mm.379124	NM_001256489		9030624G23Rik	-	RIKEN cDNA 9030624G23 gene	protein-coding
unique_peak1-6611-6-1-1.5653981103803-1.56314192529759	chr8	120520559	120520944	+	0	NA	Intergenic	RMER15|LTR|ERVL	-194922	NM_026758	68533	Mm.181836	NM_026758	ENSMUSG00000031843	Mphosph6	1110001M01Rik|AA536809|C86426	M phase phosphoprotein 6	protein-coding
common_peak2-31749-42-38-0.456927109004935-0.908349182838243	chr9	20459341	20460496	+	0	NA	exon (NM_023371, exon 2 of 4)	exon (NM_023371, exon 2 of 4)	3344	NM_023371	23988	Mm.7906	NM_023371	ENSMUSG00000032171	Pin1	0610025L01Rik|D9Bwg1161e	protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1	protein-coding
common_peak2-29048-69-86-0.152198951410004-0.444694812276494	chr5	115488928	115489571	+	0	NA	intron (NM_029012, intron 1 of 10)	intron (NM_029012, intron 1 of 10)	27716	NM_029012	74585	Mm.355894	NM_029012	ENSMUSG00000029550	Sppl3	4833416I09Rik|Psl4|Usmg3	signal peptide peptidase 3	protein-coding
common_peak1-16233-44-65--0.222501284789918-0.415025079468056	chr5	100845709	100847211	+	0	NA	Intergenic	Intergenic	-1207	NM_026969	69162	Mm.18634	NM_026969	ENSMUSG00000035325	Sec31a	1810024J13Rik|ABP125|ABP130|AU042160|HSPC275|Sec31l1	Sec31 homolog A (S. cerevisiae)	protein-coding
common_peak2-31521-62-105--0.317168995761114-0.759030078841297	chr8	109692659	109694110	+	0	NA	intron (NM_025558, intron 1 of 4)	B1_Mm|SINE|Alu	18823	NM_025558	66427	Mm.20242	NM_025558	ENSMUSG00000031924	Cyb5b	1810044O22Rik|AU015618|Cyb5m	cytochrome b5 type B	protein-coding
common_peak2-29990-25-39--0.460078189542257-0.621525249893804	chr6	122810993	122811664	+	0	NA	Intergenic	Lx8|LINE|L1	-5153	NM_009779	12267	Mm.2408	NM_009779	ENSMUSG00000040552	C3ar1	AZ3B|C3AR|HNFAG09	complement component 3a receptor 1	protein-coding
common_peak1-13563-10-3-1.35641534500877-1.75805390616669	chr2	6320144	6320670	+	0	NA	intron (NM_181399, intron 3 of 13)	B4|SINE|B4	46625	NM_181399	98910	Mm.40673	NM_181399	ENSMUSG00000039046	Usp6nl	AI316785|RNTRE|TRE2NL|mKIAA0019	USP6 N-terminal like	protein-coding
common_peak2-25467-28-25-0.352519401680371-0.541406350295756	chr19	4333150	4333984	+	0	NA	intron (NM_001001984, intron 12 of 20)	intron (NM_001001984, intron 12 of 20)	-27345	NM_001290818	110355	Mm.254144	NM_130863	ENSMUSG00000024858	Adrbk1	Adrbk-1|Bark-1|GRK2|beta ARK|betaARK1	adrenergic receptor kinase, beta 1	protein-coding
common_peak2-20514-13-28--1.0795089644898-1.33403699391683	chr10	60277456	60278314	+	0	NA	intron (NM_029770, intron 1 of 16)	intron (NM_029770, intron 1 of 16)	16444	NM_029770	107449	Mm.290433	NM_029770	ENSMUSG00000020099	Unc5b	6330415E02Rik|A630020F16|D10Bwg0792e|Unc5h2	unc-5 homolog B (C. elegans)	protein-coding
unique_peak1-6280-9-5-0.604650905683064-1.21398586181642	chr7	28796335	28796856	+	0	NA	intron (NM_001254951, intron 2 of 5)	B2_Mm1t|SINE|B2	2539	NM_001254951	100043772	Mm.129275	NM_001100456		Zfp850	C130069I09Rik|Gm4636	zinc finger protein 850	protein-coding
common_peak2-22992-8-12--0.695217300193522-0.475924844171029	chr14	57759717	57760392	+	0	NA	Intergenic	Intergenic	-7606	NM_001010937	14623	Mm.25652	NM_008128	ENSMUSG00000040055	Gjb6	AA958971|Cx30|D14Bwg0506e	gap junction protein, beta 6	protein-coding
common_peak1-12940-25-9-1.53992181045774-2.70611768348013	chr19	15924925	15926020	+	0	NA	Intergenic	ERVL-B4-int|LTR|ERVL	73640	NM_001205339	107272	Mm.289936	NM_177420	ENSMUSG00000024640	Psat1	D8Ertd814e|EPIP|PSA|Psat	phosphoserine aminotransferase 1	protein-coding
common_peak2-27713-21-45--0.954072690790778-1.71114535657706	chr3	122419326	122421043	+	0	NA	Intergenic	Intergenic	-11892	NM_153422	242202	Mm.134911	NM_153422	ENSMUSG00000053965	Pde5a	Cgbpde|Cn5n|Pde5|Pde5a1	phosphodiesterase 5A, cGMP-specific	protein-coding
common_peak2-25981-35-25-0.730930540321412-1.34810744351377	chr19	53902312	53903284	+	0	NA	intron (NM_001170847, intron 5 of 13)	Lx3B|LINE|L1	-63923	NM_011050	18569	Mm.1605	NM_011050	ENSMUSG00000024975	Pdcd4	D19Ucla1|Ma3|Tis	programmed cell death 4	protein-coding
common_peak2-20960-18-9-0.990991056340989-1.23014042908325	chr11	19849219	19849773	+	0	NA	intron (NM_033523, intron 1 of 5)	RLTR11A|LTR|ERVK	25051	NM_033523	114716	Mm.266627	NM_033523	ENSMUSG00000045671	Spred2	C79158	sprouty-related, EVH1 domain containing 2	protein-coding
common_peak1-12232-45-71--0.30956697609744-0.585993193419137	chr17	35088725	35089882	+	0	NA	non-coding (NR_027943, exon 1 of 5)	non-coding (NR_027943, exon 1 of 5)	110	NR_027943	68763	Mm.28895	NR_015536	ENSMUSG00000092203	1110038B12Rik	0610009C20Rik|0910001G04Rik	RIKEN cDNA 1110038B12 gene	ncRNA
common_peak1-10584-15-13-0.204809828498052-0.368541233333383	chr14	27114730	27115295	+	0	NA	Intergenic	RLTR20D|LTR|ERVK	33268	NM_001177538	100039227	Mm.428840	NM_001177538	ENSMUSG00000072675	Duxbl2	ENSMUSG00000072675|Gm10394	doubl homeobox B-like 2	protein-coding
common_peak2-20836-78-115--0.0511599009670372-0.309639608274445	chr11	20201272	20202229	+	0	NA	TTS (NM_018861)	TTS (NM_018861)	30966	NM_018861	55963	Mm.6379	NM_018861	ENSMUSG00000020142	Slc1a4	ASCT-1|ASCT1|AW045657|SATT	solute carrier family 1 (glutamate/neutral amino acid transporter), member 4	protein-coding
unique_peak1-4230-17-2-2.63333383748388-3.75443312462699	chr2	122821111	122821875	+	0	NA	Intergenic	L1Md_T|LINE|L1	213758	NM_021507	59010	Mm.28986	NM_021507	ENSMUSG00000005803	Sqrdl	0610039J17Rik|4930557M22Rik	sulfide quinone reductase-like (yeast)	protein-coding
unique_peak1-2299-8-1-2.00522241794757-2.05605744720049	chr15	81033837	81034354	+	0	NA	Intergenic	Intergenic	12812	NR_015603	67638	Mm.390832	NM_026288	ENSMUSG00000047938	4930483J18Rik	-	RIKEN cDNA 4930483J18 gene	ncRNA
common_peak2-26510-2-5--1.50241675698448-1.08602067057793	chr2	90501164	90501401	+	0	NA	Intergenic	ID_B1|SINE|B4	-16090	NM_021512	59015	Mm.24532	NM_021512	ENSMUSG00000051329	Nup160	160kDa|2810011M03Rik|AA414952|AU020188|Gtl-13|Gtl1-13|Gtl13|mKIAA0197	nucleoporin 160	protein-coding
unique_peak1-1734-11-1-2.50869358425161-2.83420869758413	chr13	100670716	100671364	+	0	NA	promoter-TSS (NM_001081493)	promoter-TSS (NM_001081493)	-402	NM_001081493	27220	Mm.75498	NM_013732	ENSMUSG00000021647	Cartpt	Cart	CART prepropeptide	protein-coding
unique_peak1-5935-15-0-4.01216475055566-5.11750992628768	chr6	90360025	90360729	+	0	NA	intron (NM_173775, intron 11 of 16)	intron (NM_173775, intron 11 of 16)	18097	NM_173775	243538	Mm.386876	NM_173775	ENSMUSG00000048794	Ccdc37	AW048498|C030041G11Rik|C230069K22Rik	coiled-coil domain containing 37	protein-coding
common_peak1-17004-15-7-1.01216475055566-1.08658567012551	chr6	89352037	89352631	+	0	NA	intron (NM_001167736, intron 5 of 6)	intron (NM_001167736, intron 5 of 6)	-39727	NM_008881	18844	Mm.3789	NM_008881	ENSMUSG00000030084	Plxna1	2600013D04Rik|NOV|PlexA1|Plxn1|mKIAA4053	plexin A1	protein-coding
common_peak2-31962-9-9--0.132314688483142-1.03275496310833	chr9	66171603	66172146	+	0	NA	Intergenic	Intergenic	-26383	NM_145617	235439	Mm.244179	NM_145617	ENSMUSG00000038664	Herc1	2810449H11Rik|B230218H07|D130015N03Rik|tbl	hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1	protein-coding
common_peak2-28019-12-17--0.521149016354673-0.417187467413082	chr4	47474268	47474841	+	0	NA	Intergenic	Lx6|LINE|L1	12685	NM_019998	56737	Mm.22218	NM_019998	ENSMUSG00000039740	Alg2	1110018A23Rik|1300013N08Rik|ALPG2|CDGIi|MNCb-5081	asparagine-linked glycosylation 2 (alpha-1,3-mannosyltransferase)	protein-coding
unique_peak1-7137-10-2-1.77145284428761-2.09384600808989	chr9	55127759	55128229	+	0	NA	intron (NM_032002, intron 3 of 7)	intron (NM_032002, intron 3 of 7)	3438	NM_032002	83961	Mm.443874	NM_032002	ENSMUSG00000032311	Nrg4	AI552600	neuregulin 4	protein-coding
unique_peak2-35960-1-4--1.94898510510411-1.10720996964787	chr19	17141412	17141618	+	0	NA	intron (NM_181348, intron 6 of 19)	intron (NM_181348, intron 6 of 19)	110907	NM_181348	353211	Mm.257354	NM_181348	ENSMUSG00000039126	Prune2	6330414G02Rik|A230083H22Rik|A330102H22Rik|Bmcc1|mKIAA0367	prune homolog 2 (Drosophila)	protein-coding
common_peak1-16743-83-87-0.454791006468829-1.51330020762795	chr6	31219604	31221202	+	0	NA	intron (NR_040257, intron 2 of 7)	intron (NR_040257, intron 2 of 7)	50052	NR_040261	73652	Mm.441297	NR_040257	ENSMUSG00000087380	2210408F21Rik	-	RIKEN cDNA 2210408F21 gene	ncRNA
common_peak2-20494-29-23-0.527327579893955-0.844067898188802	chr10	57794453	57795222	+	0	NA	intron (NM_026148, intron 1 of 9)	intron (NM_026148, intron 1 of 9)	8623	NM_026148	110829	Mm.57734	NM_026148	ENSMUSG00000019920	Lims1	2310016J22Rik|4921524A02Rik|AI507642|AU021743|AW551584|C430041B13Rik|Lims1l|PINCH|PINCH1	LIM and senescent cell antigen-like domains 1	protein-coding
common_peak1-11678-22-14-0.740393509478886-0.983972868822056	chr16	29579388	29580385	+	0	NA	intron (NM_001199177, intron 1 of 29)	intron (NM_001199177, intron 1 of 29)	466	NM_001199177	74143	Mm.274285	NM_133752	ENSMUSG00000038084	Opa1	1200011N24Rik|AI225888|AI847218|lilr3|mKIAA0567	optic atrophy 1	protein-coding
unique_peak2-34269-9-16--0.897849434846119-0.732381977911291	chr13	67172988	67173807	+	0	NA	intron (NM_001012449, intron 2 of 2)	intron (NM_001012449, intron 2 of 2)	9084	NM_001012448	432769	Mm.458849	NM_001012325	ENSMUSG00000058883	Zfp708	Rslcan11	zinc finger protein 708	protein-coding
common_peak1-9870-32-34-0.149809002274694-0.375453743811476	chr12	82085298	82086418	+	0	NA	Intergenic	Intergenic	-16792	NM_001177561	20493	Mm.486361	NM_011387	ENSMUSG00000021135	Slc10a1	Ntcp	solute carrier family 10 (sodium/bile acid cotransporter family), member 1	protein-coding
common_peak1-17597-19-24--0.241168863113038-0.344491671143527	chr7	44694677	44695541	+	0	NA	Intergenic	Intergenic	1824795	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak2-20237-15-25--0.688274967585436-0.73354163167379	chr1	182282119	182282940	+	0	NA	intron (NM_001081175, intron 2 of 7)	intron (NM_001081175, intron 2 of 7)	-21849	NR_003623	277333	Mm.389223	NM_199472		Gm5069	EG277333	glyceraldehyde-3-phosphate dehydrogenase pseudogene	pseudo
common_peak1-10849-23-9-1.39983940962172-2.17218792383888	chr14	120296717	120297777	+	0	NA	Intergenic	Intergenic	144410	NM_001001490	239283	Mm.138520	NM_001001490	ENSMUSG00000044819	Oxgr1	Cysltr3|Gm299|Gpr80|Gpr99|P2Y15	oxoglutarate (alpha-ketoglutarate) receptor 1	protein-coding
unique_peak2-38698-0-6--3.64748585253182-1.56314192529759	chr7	105523135	105523532	+	0	NA	Intergenic	L1M4c|LINE|L1	-13495	NM_001168539	244152	Mm.25317	NM_001024619	ENSMUSG00000049580	Tsku	9530051K01Rik|E2ig4|Lrrc54|Tsk	tsukushi	protein-coding
common_peak2-19657-4-7--1.02346051385325-1.09384600808989	chr1	51509724	51510127	+	0	NA	Intergenic	Intergenic	25318	NM_028696	109019	Mm.196290	NM_028696	ENSMUSG00000026107	Nabp1	4930434H03Rik|4930442A21Rik|4930488J04Rik|4933440J18Rik|5830411E10Rik|AI852561|Nbp1|Obfc2a|Ssb2	nucleic acid binding protein 1	protein-coding
common_peak1-16642-29-32-0.0678959612566574-0.330208782692001	chr6	72957575	72958428	+	0	NA	Intergenic	Intergenic	-49259	NM_001190327	19240	Mm.3532	NM_025284	ENSMUSG00000079523	Tmsb10	Ptmb10|Tb10	thymosin, beta 10	protein-coding
unique_peak2-37697-2-5--1.50241675698448-1.08602067057793	chr5	100596108	100596497	+	0	NA	Intergenic	Intergenic	-7475	NM_182841	231503	Mm.99790	NM_182841	ENSMUSG00000050640	Tmem150c	-	transmembrane protein 150C	protein-coding
common_peak2-27550-40-41-0.266658259972337-0.537526587463064	chr3	96263514	96264440	+	0	NA	Intergenic	U1|snRNA|snRNA	-7748	NM_001256180	329716	Mm.275223	NM_183223	ENSMUSG00000046317	BC107364	D730018G16	cDNA sequence BC107364	protein-coding
common_peak2-25091-11-7-0.508693584251613-1.21681515183528	chr18	36408141	36408533	+	0	NA	Intergenic	Lx8|LINE|L1	-32479	NM_008989	19290	Mm.231802	NM_008989		Pura	CAGER-1|Pur-alpha|ssCRE-BP	purine rich element binding protein A	protein-coding
unique_peak1-2225-8-1-2.00522241794757-2.05605744720049	chr15	74765391	74765978	+	0	NA	Intergenic	RLTR4_MM-int|LTR|ERV1	-19797	NM_001164039	17069	Mm.788	NM_008529	ENSMUSG00000022587	Ly6e	9804|Ly67|RIG-E|Sca-2|TSA-1|Tsa1	lymphocyte antigen 6 complex, locus E	protein-coding
common_peak2-26273-22-26--0.107603397076064-0.30528805757448	chr2	30716508	30717598	+	0	NA	intron (NM_009116, intron 1 of 3)	intron (NM_009116, intron 1 of 3)	16166	NM_009116	20204	Mm.1802	NM_009116	ENSMUSG00000039476	Prrx2	Prx2|S8	paired related homeobox 2	protein-coding
common_peak1-14412-26-36--0.281554273470488-0.419637632935626	chr2	174472181	174473004	+	0	NA	exon (NM_001099328, exon 1 of 5)	exon (NM_001099328, exon 1 of 5)	3557	NM_001099328	100043757	Mm.48711	NM_001099328	ENSMUSG00000050600	Zfp831	ENSMUSG00000050600|OTTMUSG00000017459	zinc finger protein 831	protein-coding
unique_peak2-39823-4-9--1.34538860874061-1.36011389749466	chrX	42058054	42058601	+	0	NA	Intergenic	Lx4B|LINE|L1	85011	NM_001190718	245404	Mm.55685	NM_178739	ENSMUSG00000045284	Dcaf12l1	9330180J20|A230038L21Rik|Decaf12l1|Wdr40b	DDB1 and CUL4 associated factor 12-like 1	protein-coding
common_peak2-30826-14-11-0.314253659636488-0.435191258261915	chr7	130654024	130654690	+	0	NA	Intergenic	Lx8|LINE|L1	-10394	NM_001081329	210162	Mm.135397	NM_175435	ENSMUSG00000030757	Zkscan2	9430065N20Rik|AW493225|Zfp694	zinc finger with KRAB and SCAN domains 2	protein-coding
common_peak1-8620-17-22--0.305265617851975-0.348739088570342	chr10	117224125	117224793	+	0	NA	intron (NM_134010, intron 4 of 27)	B1_Mm|SINE|Alu	5302	NM_134010	103468	Mm.12568	NM_134010	ENSMUSG00000052798	Nup107	AW541137|C76801	nucleoporin 107	protein-coding
common_peak1-10837-29-63--0.887709919384889-2.06265032070494	chr14	105258699	105259357	+	0	NA	intron (NR_015593, intron 2 of 5)	intron (NR_015593, intron 2 of 5)	220664	NR_015593	320249	Mm.320725	NR_015593		D130009I18Rik	-	RIKEN cDNA D130009I18 gene	ncRNA
unique_peak2-38696-7-8--0.370834171144123-1.00793137938329	chr7	102565044	102565380	+	0	NA	Intergenic	MTC|LTR|MaLR	-793935	NM_011858	23966	Mm.254610	NM_011858	ENSMUSG00000048078	Tenm4	Doc4|ELM2|Odz4|R75022|Ten-m4|l(7)-3Rn|l7Rn3|mKIAA1302	teneurin transmembrane protein 4	protein-coding
unique_peak2-34675-1-4--1.94898510510411-1.10720996964787	chr15	7810674	7811079	+	0	NA	Intergenic	Intergenic	45326	NM_001301357	14573	Mm.4679	NM_010275	ENSMUSG00000022144	Gdnf	AI385739	glial cell line derived neurotrophic factor	protein-coding
unique_peak2-33573-2-19--3.23938235115068-3.75443312462699	chr11	85492687	85493440	+	0	NA	intron (NM_001166643, intron 22 of 23)	PB1D10|SINE|Alu	40183	NR_045875	71489	Mm.442482	NR_045875	ENSMUSG00000086199	Bcas3os1	8430403D17Rik	breast carcinoma amplified sequence 3, opposite strand 1	ncRNA
unique_peak2-39224-1-7--2.62705701021674-1.80617997398389	chr8	109185569	109186051	+	0	NA	exon (NM_009864, exon 11 of 16)	exon (NM_009864, exon 11 of 16)	-21158	NM_173037	272538	Mm.87151	NM_173037	ENSMUSG00000041949	Tango6	AW413431|E330010G16|Tmco7	transport and golgi organization 6	protein-coding
common_peak2-24838-26-17-0.75797409071615-1.09210977391291	chr17	74316461	74317007	+	0	NA	Intergenic	Lx4B|LINE|L1	-17198	NM_011723	22436	Mm.11223	NM_011723	ENSMUSG00000024066	Xdh	XO|Xor|Xox-1|Xox1	xanthine dehydrogenase	protein-coding
common_peak1-18648-22-50--1.02514123688409-2.14568534968695	chr8	111643336	111643989	+	0	NA	Intergenic	Intergenic	182902	NR_037295	100526511		NR_037295		Mir3108	mmu-mir-3108	microRNA 3108	ncRNA
unique_peak2-37028-11-6-0.701338662194009-1.32595962126035	chr3	129535498	129535932	+	0	NA	Intergenic	Intergenic	-1401	NM_026578	68147	Mm.24873	NM_026578	ENSMUSG00000028010	Gar1	AA409823|AI326794|C430047J18Rik|Nola1	GAR1 ribonucleoprotein homolog (yeast)	protein-coding
common_peak2-22704-17-30--0.735899972181837-0.841847921495509	chr13	100730173	100730853	+	0	NA	intron (NM_030026, intron 12 of 16)	intron (NM_030026, intron 12 of 16)	55081	NM_030026	78038	Mm.137327	NM_030026	ENSMUSG00000021646	Mccc2	4930552N12Rik|MCCB	methylcrotonoyl-Coenzyme A carboxylase 2 (beta)	protein-coding
unique_peak2-37293-2-10--2.37688587490062-2.09384600808989	chr4	119105922	119106375	+	0	NA	intron (NM_001014900, intron 1 of 7)	L1MA4|LINE|L1	10859	NM_001014900	332934	Mm.388911	NM_001014900	ENSMUSG00000070806	Zmynd12	AI414736	zinc finger, MYND domain containing 12	protein-coding
common_peak1-12489-26-66--1.13819009829931-3.3054085949608	chr17	87107389	87108147	+	0	NA	Intergenic	Intergenic	-45436	NM_010137	13819	Mm.1415	NM_010137	ENSMUSG00000024140	Epas1	HIF-2alpha|HIF2A|HLF|HRF|MOP2|bHLHe73	endothelial PAS domain protein 1	protein-coding
unique_peak2-32919-14-25--0.801223557783447-0.84969927174089	chr10	24595350	24596089	+	0	NA	intron (NM_001166416, intron 6 of 29)	intron (NM_001166416, intron 6 of 29)	5927	NM_027347	70208	Mm.28020	NM_027347	ENSMUSG00000019984	Med23	130kDa|3000002A17Rik|Crsp3|ESTM7|Sur2|X83317|mKIAA1216	mediator complex subunit 23	protein-coding
common_peak2-30737-32-31-0.27909201921966-0.499999074040591	chr7	118276757	118278129	+	0	NA	Intergenic	Intergenic	-11254	NR_015573	75479	Mm.381620	NR_015573		1700012D14Rik	-	RIKEN cDNA 1700012D14 gene	ncRNA
unique_peak1-3809-14-6-1.09186123830004-1.16633110333236	chr2	58589116	58589853	+	0	NA	intron (NM_001289660, intron 1 of 7)	intron (NM_001289660, intron 1 of 7)	-18111	NM_001289659	76654	Mm.200370	NM_029692	ENSMUSG00000026839	Upp2	1700124F02Rik|AI266885|UDRPASE2|UP2|UPASE2	uridine phosphorylase 2	protein-coding
unique_peak1-7274-18-6-1.50556422917075-2.02801025126771	chr9	98781363	98782038	+	0	NA	Intergenic	MuRRS4-int|LTR|ERV1	16514	NM_028033	71979	Mm.140843	NM_028033	ENSMUSG00000090470	2410012M07Rik	-	RIKEN cDNA 2410012M07 gene	protein-coding
common_peak2-22445-50-55-0.233585394421349-0.518477330661964	chr13	41000293	41001854	+	0	NA	intron (NM_008105, intron 1 of 2)	intron (NM_008105, intron 1 of 2)	-11930	NM_133219	14538	Mm.314757	NM_008105	ENSMUSG00000021360	Gcnt2	5330430K10Rik|IGnT|IGnTA|IGnTB|IGnTC	glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	protein-coding
common_peak1-14401-32-19-0.957163924332297-1.82978420966174	chr2	173271686	173273121	+	0	NA	Intergenic	ORR1E|LTR|MaLR	-75690	NM_028158	72221	Mm.46132	NM_028158	ENSMUSG00000027518	1700021F07Rik	-	RIKEN cDNA 1700021F07 gene	protein-coding
unique_peak2-34936-1-7--2.62705701021674-1.80617997398389	chr15	87596730	87597196	+	0	NA	Intergenic	Intergenic	29410	NR_105817	102465209		NR_105817	miRBase:MI0021927	Mir6393	mmu-mir-6393	microRNA mir-6393	ncRNA
unique_peak2-33921-8-11--0.579740082773585-1.14218153353838	chr12	69513047	69513690	+	0	NA	Intergenic	L1Md_T|LINE|L1	-743110	NR_033146	100316870	Mm.379794	NR_033146		Gm17821	-	DDB1 and CUL4 associated factor 5 pseudogene	pseudo
common_peak1-11468-97-85-0.757736316790184-3.73949572411947	chr15	101950723	101954248	+	0	NA	intron (NM_001033277, intron 6 of 10)	intron (NM_001033277, intron 6 of 10)	14161	NM_001033277	223918	Mm.385009	NM_001033277	ENSMUSG00000036966	Spryd3	BC008150	SPRY domain containing 3	protein-coding
unique_peak2-33451-1-5--2.2120195109379-1.32905871926422	chr11	63921802	63922244	+	0	NA	Intergenic	Intergenic	29037	NR_033780	66456	Mm.124828	NR_033780	ENSMUSG00000087497	2810001G20Rik	AW045514	RIKEN cDNA 2810001G20 gene	ncRNA
common_peak2-28504-13-34--1.3508109863072-2.16696607243888	chr5	24100359	24101330	+	0	NA	intron (NM_025891, intron 7 of 12)	intron (NM_025891, intron 7 of 12)	2912	NR_030423	735264		NR_030423		Mir671	Mirn671|mmu-mir-671	microRNA 671	ncRNA
common_peak1-13305-57-37-1.01810552663534-3.4145460777599	chr19	41448881	41450298	+	0	NA	intron (NM_031376, intron 2 of 16)	intron (NM_031376, intron 2 of 16)	9971	NM_031376	83490	Mm.222266	NM_031376	ENSMUSG00000025017	Pik3ap1	1810044J04Rik|BCAP	phosphoinositide-3-kinase adaptor protein 1	protein-coding
common_peak1-13141-17-28--0.639684656922534-0.677583764578261	chr19	9982523	9983282	+	0	NA	Intergenic	RLTR12A|LTR|ERVK	-8879	NM_016692	16319	Mm.29755	NM_016692	ENSMUSG00000024660	Incenp	2700067E22Rik|AU019509|C130081E20|C77457	inner centromere protein	protein-coding
unique_peak2-39802-6-6--0.241956811677302-0.947717972411649	chrX	20658266	20658672	+	0	NA	3' UTR (NM_183185, exon 5 of 5)	3' UTR (NM_183185, exon 5 of 5)	7886	NM_183185	245368	Mm.220470	NM_183185	ENSMUSG00000031079	Zfp300	D930016N04Rik	zinc finger protein 300	protein-coding
common_peak2-22274-7-7--0.200909169701811-0.97990265578305	chr13	8871117	8871520	+	0	NA	promoter-TSS (NM_001039388)	promoter-TSS (NM_001039388)	-336	NM_001039388	207615	Mm.284654	NM_172445	ENSMUSG00000021147	Wdr37	-	WD repeat domain 37	protein-coding
common_peak2-21485-20-23--0.0968877161299631-0.305855887145851	chr11	88497860	88498670	+	0	NA	intron (NM_054043, intron 5 of 13)	intron (NM_054043, intron 5 of 13)	81278	NM_054043	76626	Mm.400451	NM_054043	ENSMUSG00000069769	Msi2	1700105C15Rik|AI451722|AI563628|AW489193|Msi2h	musashi RNA-binding protein 2	protein-coding
common_peak1-9191-24-20-0.400892479988956-0.591915184368645	chr11	79711121	79712203	+	0	NA	Intergenic	Intergenic	64227	NM_144826	216987	Mm.274961	NM_144826	ENSMUSG00000035575	Utp6	4732497O03Rik|HCA66	UTP6, small subunit (SSU) processome component, homolog (yeast)	protein-coding
common_peak2-24878-9-13--0.617741515653384-0.459837087125828	chr17	83276162	83276721	+	0	NA	Intergenic	Intergenic	201124	NR_045094	100503434	Mm.187281	NR_045094		Gm19689	-	predicted gene, 19689	ncRNA
unique_peak1-1552-14-4-1.57728806547028-2.4322161449009	chr13	24999930	25000465	+	0	NA	3' UTR (NM_172532, exon 10 of 10)	3' UTR (NM_172532, exon 10 of 10)	2728	NR_045182	73326	Mm.458692	NR_045182		4932702P03Rik	1700047I16Rik	RIKEN cDNA 4932702P03 gene	ncRNA
unique_peak2-33638-11-15--0.491306415748387-0.435191258261915	chr11	98588249	98588987	+	0	NA	intron (NM_011869, intron 3 of 25)	(CAAA)n|Simple_repeat|Simple_repeat	2131	NM_011869	23989	Mm.246493	NM_011869	ENSMUSG00000017210	Med24	911GSE|AU040102|AW547152|D11Ertd307e|DRIP100|Gse2|Pparb2|Pparbp2|R75526|Thrap4|Trap100	mediator complex subunit 24	protein-coding
unique_peak1-5374-9-0-3.18961340640422-3.01029995663981	chr5	99232967	99233437	+	0	NA	Intergenic	Intergenic	-50256	NM_173404	110075	Mm.209571	NM_173404	ENSMUSG00000029335	Bmp3	9130206H07|9530029I04Rik	bone morphogenetic protein 3	protein-coding
common_peak2-23178-8-12--0.695217300193522-0.475924844171029	chr15	38469140	38469658	+	0	NA	Intergenic	Intergenic	-20378	NM_018745	54375	Mm.250214	NM_018745	ENSMUSG00000037458	Azin1	1700085L02Rik|AI414949|Oazi|Oazin	antizyme inhibitor 1	protein-coding
common_peak1-12816-51-89--0.416929270727102-0.976994348301596	chr18	67723622	67725200	+	0	NA	Intergenic	Intergenic	-12036	NM_194355	68166	Mm.208723	NM_176832	ENSMUSG00000024533	Spire1	6030430B19Rik|AI415299|AU022898|AW550622|Spir-1	spire homolog 1 (Drosophila)	protein-coding
common_peak2-32163-6-7--0.434601889619698-0.97990265578305	chr9	110100546	110101008	+	0	NA	intron (NM_009211, intron 21 of 27)	intron (NM_009211, intron 21 of 27)	-45510	NM_013884	29873	Mm.38496	NM_013884	ENSMUSG00000032482	Cspg5	Caleb|Ngc	chondroitin sulfate proteoglycan 5	protein-coding
unique_peak2-33974-2-5--1.50241675698448-1.08602067057793	chr12	84222312	84222695	+	0	NA	intron (NM_001282061, intron 15 of 16)	Tigger5|DNA|MER2_type	-182361	NR_046045	74283	Mm.398247	NR_046045		1700085C21Rik	-	RIKEN cDNA 1700085C21 gene	ncRNA
common_peak2-23030-9-12--0.510826311736872-0.394412252720706	chr14	65881625	65882109	+	0	NA	promoter-TSS (NM_021458)	promoter-TSS (NM_021458)	-567	NM_021458	14365	Mm.214687	NM_021458		Fzd3	AU020229|D930050A07Rik|Fz3	frizzled homolog 3 (Drosophila)	protein-coding
common_peak1-10796-13-14--0.12841856497075-0.301029995663977	chr14	76664265	76664830	+	0	NA	Intergenic	Intergenic	-151081	NM_207652	21807	Mm.153272	NM_009366	ENSMUSG00000022010	Tsc22d1	AA589566|AW105905|Egr5|TSC-22|Tgfb1i4|Tsc|Tsc22	TSC22 domain family, member 1	protein-coding
common_peak1-13122-62-46-0.856162607124447-2.86088863980773	chr19	8983013	8984933	+	0	NA	exon (NM_001293621, exon 9 of 24)	exon (NM_001293621, exon 9 of 24)	-10910	NM_024256	72727	Mm.259	NM_024256	ENSMUSG00000071649	B3gat3	2810405M13Rik	beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)	protein-coding
unique_peak1-2760-10-4-1.03448725012141-1.5150158574804	chr17	5125008	5125674	+	0	NA	intron (NM_001085355, intron 3 of 19)	intron (NM_001085355, intron 3 of 19)	130267	NM_001085355	239985	Mm.133401	NM_001085355	ENSMUSG00000069729	Arid1b	8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235	AT rich interactive domain 1B (SWI-like)	protein-coding
unique_peak2-38458-8-9--0.316705676939792-1.03275496310833	chr7	28716776	28717289	+	0	NA	Intergenic	CT-rich|Low_complexity|Low_complexity	-2583	NM_028538	73430	Mm.379224	NM_028538	ENSMUSG00000070709	1700049G17Rik	AV321011|BB026409	RIKEN cDNA 1700049G17 gene	protein-coding
common_peak2-26172-19-18-0.154759813218101-0.351190433797598	chr2	20735919	20736919	+	0	NA	Intergenic	ID2|SINE|ID	152929	NM_001081364	71435	Mm.28507	NM_001081364	ENSMUSG00000036591	Arhgap21	5530401C11Rik|AA416458|ARHGAP10	Rho GTPase activating protein 21	protein-coding
common_peak2-30765-60-90--0.153502778578165-0.381858126774389	chr7	123123750	123124834	+	0	NA	intron (NM_001025559, intron 1 of 15)	intron (NM_001025559, intron 1 of 15)	14308	NM_011445	20679	Mm.323365	NM_011445	ENSMUSG00000051910	Sox6	AI987981|SOX-LZ	SRY (sex determining region Y)-box 6	protein-coding
unique_peak2-37656-11-10-0.0492619656143161-0.31137425193576	chr5	92093532	92094114	+	0	NA	Intergenic	L1Md_F2|LINE|L1	102503	NR_045383	73452	Mm.396233	NR_045383		1700063O14Rik	-	RIKEN cDNA 1700063O14 gene	ncRNA
common_peak1-8885-30-35--0.000249591950439054-0.304088508634279	chr11	48800152	48801204	+	0	NA	exon (NM_011579, exon 2 of 2)	exon (NM_011579, exon 2 of 2)	5070	NM_011579	21822	Mm.15793	NM_011579	ENSMUSG00000078922	Tgtp1	Gtp2|Irgb6|Mg21|Tgtp	T cell specific GTPase 1	protein-coding
common_peak1-12285-23-35--0.448157496933232-0.590428395010947	chr17	45432912	45433824	+	0	NA	Intergenic	Intergenic	137288	NM_152810	71702	Mm.28270	NM_152810	ENSMUSG00000023932	Cdc5l	1200002I02Rik|AA408004|PCDC5RP	cell division cycle 5-like (S. pombe)	protein-coding
common_peak1-9483-94-160--0.201327310265301-0.590774498860861	chr11	106787398	106789267	+	0	NA	Intergenic	Intergenic	-6303	NM_025481	66313	Mm.340955	NM_025481	ENSMUSG00000018363	Smurf2	2810411E22Rik|AI558114|AI649275	SMAD specific E3 ubiquitin protein ligase 2	protein-coding
common_peak2-31540-13-5-1.19350952991661-1.95509489018123	chr8	111360976	111361312	+	0	NA	intron (NM_007496, intron 3 of 9)	intron (NM_007496, intron 3 of 9)	-99616	NR_037295	100526511		NR_037295		Mir3108	mmu-mir-3108	microRNA 3108	ncRNA
unique_peak2-33120-8-17--1.16470258349474-1.02063122982878	chr10	81384246	81384934	+	0	NA	intron (NM_199062, intron 1 of 3).2	intron (NM_199062, intron 1 of 3).2	8635	NM_199062	331188	Mm.351497	NM_199062		Zfp781	A130081B01	zinc finger protein 781	protein-coding
common_peak2-24484-7-8--0.370834171144123-1.00793137938329	chr17	24735392	24735857	+	0	NA	intron (NM_001286713, intron 36 of 41)	intron (NM_001286713, intron 36 of 41)	33948	NM_011647	22084	Mm.30435	NM_011647	ENSMUSG00000002496	Tsc2	Nafld|Tcs2	tuberous sclerosis 2	protein-coding
common_peak1-8727-28-26-0.298071617657994-0.481798116163919	chr11	119913480	119914588	+	0	NA	Intergenic	Intergenic	-5575	NM_007377	11302	Mm.6826	NM_007377	ENSMUSG00000025375	Aatk	AATYK|aatyk1|mKIAA0641	apoptosis-associated tyrosine kinase	protein-coding
unique_peak2-33656-1-7--2.62705701021674-1.80617997398389	chr11	100067341	100067726	+	0	NA	intron (NM_016958, intron 1 of 7)	intron (NM_016958, intron 1 of 7)	1291	NM_016958	16664	Mm.439898	NM_016958	ENSMUSG00000045545	Krt14	AI626930|K14|Krt-1.14|Krt1-14	keratin 14	protein-coding
common_peak1-13722-9-8-0.0196884049619079-1.03275496310833	chr2	30896811	30897285	+	0	NA	intron (NM_001038700, intron 9 of 14)	B1F|SINE|Alu	54972	NM_001177650	14269	Mm.52297	NM_019406	ENSMUSG00000075415	Fnbp1	1110057E06Rik|2210010H06Rik|FBP1|Fbp17	formin binding protein 1	protein-coding
common_peak2-29488-23-19-0.399839409621718-0.538442145997695	chr6	31205894	31206624	+	0	NA	intron (NR_040257, intron 2 of 7)	intron (NR_040257, intron 2 of 7)	35908	NR_040261	73652	Mm.441297	NR_040257	ENSMUSG00000087380	2210408F21Rik	-	RIKEN cDNA 2210408F21 gene	ncRNA
common_peak2-24826-49-49-0.362427633250459-0.734681648433366	chr17	71598089	71599346	+	0	NA	3' UTR (NM_022882, exon 20 of 20)	3' UTR (NM_022882, exon 20 of 20)	44723	NM_001164885	64898	Mm.227924	NM_022882	ENSMUSG00000024052	Lpin2	2610511G02Rik|AI481352|AW742896	lipin 2	protein-coding
common_peak1-9021-13-5-1.19350952991661-1.95509489018123	chr11	61607478	61607958	+	0	NA	intron (NM_013881, intron 20 of 26)	intron (NM_013881, intron 20 of 26)	-32128	NM_001164243	212627	Mm.27703	NM_144806	ENSMUSG00000020528	Prpsap2	A230054F23Rik	phosphoribosyl pyrophosphate synthetase-associated protein 2	protein-coding
common_peak2-21664-49-65--0.0381102963332696-0.302713324468805	chr11	103094758	103095624	+	0	NA	intron (NM_016896, intron 6 of 15)	intron (NM_016896, intron 6 of 15)	-15445	NM_177801	328019	Mm.189646	NM_177801	ENSMUSG00000044787	Spata32	4933400C05Rik|VAD1.2	spermatogenesis associated 32	protein-coding
common_peak1-13792-14-8-0.729291158915332-0.771068449301682	chr2	38925255	38925859	+	0	NA	3' UTR (NM_178778, exon 18 of 18)	3' UTR (NM_178778, exon 18 of 18)	-4496	NM_029793	76899	Mm.131098	NM_029793	ENSMUSG00000026754	Golga1	0710001G09Rik|2210418B03Rik|AW107649|Golgi97|golgin-97	golgi autoantigen, golgin subfamily a, 1	protein-coding
unique_peak1-6991-9-4-0.867685311516858-1.36011389749466	chr8	120539372	120539925	+	0	NA	Intergenic	RMER17B|LTR|ERVK	-213819	NM_026758	68533	Mm.181836	NM_026758	ENSMUSG00000031843	Mphosph6	1110001M01Rik|AA536809|C86426	M phase phosphoprotein 6	protein-coding
common_peak1-14055-197-283-0.265095494183338-1.47336781797147	chr2	119476881	119478858	+	0	NA	Intergenic	B1_Mur4|SINE|Alu	10665	NM_027175	69702	Mm.5390	NM_027175	ENSMUSG00000027305	Ndufaf1	2410001M24Rik|CGI-65|CIA30	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1	protein-coding
unique_peak1-3416-13-5-1.19350952991661-1.95509489018123	chr19	5939291	5939977	+	0	NA	TTS (NM_008893)	TTS (NM_008893)	-14818	NM_026772	104252	Mm.491103	NM_026772	ENSMUSG00000045664	Cdc42ep2	1110008C05Rik|Borg1|Cep2|D19Bwg1013e	CDC42 effector protein (Rho GTPase binding) 2	protein-coding
common_peak1-19297-9-26--1.56527409575925-2.17218792383888	chr9	120933454	120934040	+	0	NA	intron (NM_177589, intron 35 of 36)	intron (NM_177589, intron 35 of 36)	69543	NR_106058	102465661		NR_106058		Mir7090	mmu-mir-7090	microRNA mir-7090	ncRNA
unique_peak2-33984-6-5--0.0195643903408542-0.947717972411649	chr12	85824655	85825086	+	0	NA	intron (NM_173756, intron 5 of 5)	B1_Mur1|SINE|Alu	32412	NM_173756	217708	Mm.311904	NM_173756	ENSMUSG00000085793	Lin52	5830457H20Rik	lin-52 homolog (C. elegans)	protein-coding
common_peak1-12778-12-5-1.06381348436648-1.78669045979184	chr18	61632993	61633610	+	0	NA	intron (NR_045419, intron 3 of 3)	intron (NR_045419, intron 3 of 3)	10960	NR_045419	442846	Mm.417648	NR_045419		A530050N04Rik	-	RIKEN cDNA A530050N04 gene	ncRNA
common_peak2-27938-7-5-0.214128329577033-1.01466476204226	chr4	24496696	24497104	+	0	NA	intron (NM_199467, intron 13 of 23)	intron (NM_199467, intron 13 of 23)	73291	NM_199467	212377	Mm.120919	NM_199467	ENSMUSG00000045751	Mms22l	F730047E07Rik|Gm134	MMS22-like, DNA repair protein	protein-coding
common_peak2-30655-10-17--0.813509656433543-0.699649909729472	chr7	100285332	100285947	+	0	NA	Intergenic	(CAAAA)n|Simple_repeat|Simple_repeat	57250	NM_021427	58238	Mm.113787	NM_021427		Fam181b	A830059I20Rik|AB041569	family with sequence similarity 181, member B	protein-coding
common_peak1-16627-14-24--0.74464002941708-0.756118839439549	chr6	28262004	28262506	+	0	NA	Intergenic	Intergenic	-50654	NM_001081678	627049	Mm.84441	NM_001081678	ENSMUSG00000039841	Zfp800	AA407452|Znf800	zinc finger protein 800	protein-coding
common_peak2-29562-39-56--0.217128767245588-0.402440571782907	chr6	43665282	43666506	+	0	NA	Intergenic	Lx|LINE|L1	-49720	NM_013861	29807	Mm.320979	NM_013861	ENSMUSG00000029735	Tpk1	-	thiamine pyrophosphokinase	protein-coding
common_peak1-18777-52-70--0.0414871292389831-0.302592219506763	chr8	127063756	127065040	+	0	NA	intron (NM_029746, intron 9 of 17)	intron (NM_029746, intron 9 of 17)	19731	NM_029746	76332	Mm.240108	NM_029746	ENSMUSG00000031979	Cog2	1190002B08Rik|2700012E02Rik|C86089|Ldlc	component of oligomeric golgi complex 2	protein-coding
common_peak2-24588-28-50--0.619466222150033-1.0624982013315	chr17	31855965	31857065	+	0	NA	Intergenic	Intergenic	41639	NM_001278570	12954	Mm.1228	NM_013501	ENSMUSG00000024041	Cryaa	Acry-1|Crya-1|Crya1|DAcry-1|lop18	crystallin, alpha A	protein-coding
common_peak2-24738-29-35--0.0576349208272013-0.301029995663967	chr17	47923763	47924998	+	0	NA	intron (NM_001161722, intron 4 of 8)	MIRb|SINE|MIR	1687	NM_011549	21425	Mm.2305	NM_011549	ENSMUSG00000023990	Tfeb	Tcfeb|bHLHe35	transcription factor EB	protein-coding
unique_peak2-34849-9-19--1.13231468848314-1.09394599973099	chr15	76246734	76247457	+	0	NA	intron (NM_175457, intron 12 of 43)	intron (NM_175457, intron 12 of 43)	-16549	NR_105919	102465576		NR_105919		Mir6954	mmu-mir-6954	microRNA mir-6954	ncRNA
common_peak2-25171-116-161-0.154279330624797-0.531032240362716	chr18	53861534	53863244	+	0	NA	intron (NM_178686, intron 18 of 20)	intron (NM_178686, intron 18 of 20)	41812	NM_178686	225523	Mm.193678	NM_178686	ENSMUSG00000048799	Cep120	A230075C01|AU016693|Ccdc100	centrosomal protein 120	protein-coding
unique_peak2-39740-7-7--0.200909169701811-0.97990265578305	chr9	123308833	123309231	+	0	NA	intron (NM_153168, intron 5 of 20)	intron (NM_153168, intron 5 of 20)	32974	NM_153168	102436	Mm.276076	NM_153168	ENSMUSG00000035202	Lars2	AI035546|Kiaa0028|LEURS	leucyl-tRNA synthetase, mitochondrial	protein-coding
unique_peak2-38941-6-11--1.01956439034085-1.32595962126035	chr8	25621836	25622396	+	0	NA	Intergenic	ORR1C2-int|LTR|MaLR	64689	NM_145949	209176	Mm.219580	NM_145949	ENSMUSG00000031549	Ido2	AI265623|C230043N17Rik|Ido-2|Indol1	indoleamine 2,3-dioxygenase 2	protein-coding
unique_peak1-1478-10-2-1.77145284428761-2.09384600808989	chr12	112599470	112600038	+	0	NA	intron (NM_183016, intron 1 of 36)	intron (NM_183016, intron 1 of 36)	16175	NM_183016	217866	Mm.27397	NM_183016	ENSMUSG00000021279	Cdc42bpb	MRCKb	CDC42 binding protein kinase beta	protein-coding
unique_peak2-38061-39-72--0.574063311960864-1.25617732716374	chr6	47671888	47673520	+	0	NA	Intergenic	Intergenic	21526	NR_002841	19799		NR_002841		Rn4.5s	-	4.5S RNA	rRNA
common_peak2-23363-46-76--0.368790597446099-0.710725903974579	chr15	51864581	51865674	+	0	NA	Intergenic	Intergenic	-6526	NM_175503	239435	Mm.24204	NM_175503	ENSMUSG00000068522	Aard	A5D3|AV328152	alanine and arginine rich domain containing protein	protein-coding
common_peak1-11290-15-9-0.690236655668294-0.732381977911291	chr15	83403586	83404153	+	0	NA	intron (NM_009775, intron 3 of 3)	AT_rich|Low_complexity|Low_complexity	9866	NM_009775	12257	Mm.1508	NM_009775	ENSMUSG00000041736	Tspo	Bzrp|IBP|PBR|Tspo1	translocator protein	protein-coding
unique_peak2-39125-5-11--1.28934283672701-1.477227296591	chr8	84004187	84004900	+	0	NA	intron (NM_001297596, intron 2 of 24)	L1MA4A|LINE|L1	138082	NM_001297593	234515	Mm.324468	NM_001024617	ENSMUSG00000037940	Inpp4b	E130107I17Rik	inositol polyphosphate-4-phosphatase, type II	protein-coding
unique_peak2-33901-5-10--1.16381195464315-1.33892459842472	chr12	54656069	54656573	+	0	NA	intron (NM_013780, intron 3 of 11)	intron (NM_013780, intron 3 of 11)	306657	NM_013780	27386	Mm.247044	NM_013780	ENSMUSG00000021010	Npas3	4930423H22Rik|bHLHe12	neuronal PAS domain protein 3	protein-coding
common_peak1-18054-29-15-1.11229008061511-2.08778000015696	chr7	144982072	144983362	+	0	NA	Intergenic	MTEb|LTR|MaLR	353360	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
common_peak1-9055-9-13--0.617741515653384-0.459837087125828	chr11	68446255	68446916	+	0	NA	Intergenic	Intergenic	46046	NM_177779	276920	Mm.123046	NM_177779	ENSMUSG00000045915	Ccdc42	A530001H01Rik	coiled-coil domain containing 42	protein-coding
unique_peak1-19-20-5-1.90311228387004-2.81016724606745	chr1	184859893	184860768	+	0	NA	Intergenic	(TTTTTG)n|Simple_repeat|Simple_repeat	-24589	NM_016928	53791	Mm.116894	NM_016928	ENSMUSG00000079164	Tlr5	-	toll-like receptor 5	protein-coding
unique_peak2-33895-8-9--0.316705676939792-1.03275496310833	chr12	51347713	51348257	+	0	NA	Intergenic	L1Md_A|LINE|L1	402225	NM_008858	18760	Mm.133719	NM_008858	ENSMUSG00000002688	Prkd1	PKD|PKD1|Pkcm|Prkcm	protein kinase D1	protein-coding
common_peak1-16545-45-54-0.0789983118202118-0.332057628060234	chr5	143731365	143733174	+	0	NA	exon (NM_007984, exon 4 of 5)	exon (NM_007984, exon 4 of 5)	10235	NM_007984	14086	Mm.289707	NM_007984	ENSMUSG00000029581	Fscn1	AI663989|Fan1|fascin-1	fascin homolog 1, actin bundling protein (Strongylocentrotus purpuratus)	protein-coding
common_peak1-10311-13-22--0.745089925419244-0.690311289528838	chr13	67483843	67484438	+	0	NA	Intergenic	MuRRS4-int|LTR|ERV1	-7441	NM_001001186	408065	Mm.461583	NM_001001186	ENSMUSG00000078995	Zfp456	BC065418|Rslcan-13	zinc finger protein 456	protein-coding
common_peak2-22139-17-18--0.0296311752385474-0.306899554715732	chr12	85958982	85959684	+	0	NA	promoter-TSS (NM_008992)	promoter-TSS (NM_008992)	-917	NM_008992	19300	Mm.229109	NM_008992	ENSMUSG00000021240	Abcd4	P69r|P70R|Pxmp1l	ATP-binding cassette, sub-family D (ALD), member 4	protein-coding
unique_peak2-36530-4-13--1.83081543591085-2.04196296489515	chr2	163589429	163590065	+	0	NA	Intergenic	Intergenic	-13772	NM_001272052	11486	Mm.388	NM_007398	ENSMUSG00000017697	Ada	-	adenosine deaminase	protein-coding
common_peak2-23548-116-137-0.385604876731252-1.5715211171417	chr15	78876082	78878180	+	0	NA	Intergenic	Intergenic	4816	NM_015738	14429	Mm.390805	NM_015738	ENSMUSG00000006378	Galr3	Galnr3	galanin receptor 3	protein-coding
common_peak2-22745-13-34--1.3508109863072-2.16696607243888	chr13	111490161	111490760	+	0	NA	Intergenic	L1_Rod|LINE|L1	305208	NM_152804	20620	Mm.380	NM_152804	ENSMUSG00000021701	Plk2	Snk	polo-like kinase 2	protein-coding
unique_peak1-1666-15-2-2.4272022498345-3.53487848679804	chr13	64343801	64344336	+	0	NA	intron (NM_001122989, intron 4 of 13)	RSINE1|SINE|B4	5778	NM_001122989	218294	Mm.25335	NM_172587	ENSMUSG00000033102	Cdc14b	2810432N10Rik|A530086E13Rik|AA472821|CDC14B3|Cdc14B1	CDC14 cell division cycle 14B	protein-coding
unique_peak2-38639-2-5--1.50241675698448-1.08602067057793	chr7	87246639	87247031	+	0	NA	intron (NM_173011, intron 2 of 10)	B3|SINE|B2	13401	NM_173011	269951	Mm.246432	NM_173011	ENSMUSG00000030541	Idh2	E430004F23|IDPm|Idh-2	isocitrate dehydrogenase 2 (NADP+), mitochondrial	protein-coding
unique_peak1-3551-10-2-1.77145284428761-2.09384600808989	chr19	24467186	24467705	+	0	NA	intron (NM_008846, intron 4 of 14)	intron (NM_008846, intron 4 of 14)	84519	NM_026520	68034	Mm.440181	NM_026520		Fam122a	2410124L17Rik|2900009I07Rik|ENSMUSG00000051082|Gm9849	family with sequence similarity 122, member A	protein-coding
unique_peak2-35274-4-5--0.608423014574403-0.909929411522249	chr17	3684890	3685269	+	0	NA	intron (NM_198958, intron 5 of 12)	intron (NM_198958, intron 5 of 12)	11182	NM_198958	224480	Mm.328756	NM_198958	ENSMUSG00000023802	Nox3	GP91-3|het|nmf250	NADPH oxidase 3	protein-coding
unique_peak2-33465-0-6--3.64748585253182-1.56314192529759	chr11	68973438	68973724	+	0	NA	intron (NM_009659, intron 2 of 14)	intron (NM_009659, intron 2 of 14)	3007	NM_009659	11686	Mm.340329	NM_009659	ENSMUSG00000032807	Alox12b	Aloxe2|e-LOX2	arachidonate 12-lipoxygenase, 12R type	protein-coding
unique_peak1-2867-9-3-1.18961340640422-1.57096726280955	chr17	34862876	34863385	+	0	NA	Intergenic	PB1D10|SINE|Alu	17712	NM_009780	12268	Mm.477109	NM_009780	ENSMUSG00000073418	C4b	C4|Ss	complement component 4B (Chido blood group)	protein-coding
common_peak2-30487-44-49-0.178036644793811-0.432262512709542	chr7	55961777	55963050	+	0	NA	Intergenic	RLTR20B2|LTR|ERVK	-63242	NM_207537	404238	Mm.377926	NM_207537	ENSMUSG00000070546	Mrgprb3	MrgB3	MAS-related GPR, member B3	protein-coding
common_peak2-25550-89-107-0.280079252662534-0.827457127464096	chr19	6140160	6141904	+	0	NA	intron (NM_019722, intron 1 of 4)	CpG	105	NM_019722	56327	Mm.21071	NM_019722		Arl2	2610009M23Rik|AI115441|AW553335	ADP-ribosylation factor-like 2	protein-coding
unique_peak2-34597-10-12--0.344024373132323-0.340565874754526	chr14	70191937	70192472	+	0	NA	intron (NM_153514, intron 7 of 9)	intron (NM_153514, intron 7 of 9)	13148	NM_153514	246710	Mm.102367	NM_153514	ENSMUSG00000022075	Rhobtb2	Dbc2|E130206H14Rik|mKIAA0717	Rho-related BTB domain containing 2	protein-coding
common_peak2-30151-54-61-0.218889451242859-0.498810849059183	chr6	146577303	146578478	+	0	NA	intron (NM_026281, intron 1 of 11)	intron (NM_026281, intron 1 of 11)	5224	NM_026281	67623	Mm.278037	NM_026281	ENSMUSG00000040234	Tm7sf3	2010003B14Rik|NARP1	transmembrane 7 superfamily member 3	protein-coding
common_peak1-13480-66-87-0.0590520457885439-0.331361767726616	chr2	18676288	18678342	+	0	NA	Intergenic	Intergenic	56666	NM_001001334	381350	Mm.330024	NM_001001334		BC061194	-	cDNA sequence BC061194	protein-coding
common_peak2-30347-7-12--0.901348887842903-1.31827279259406	chr7	27195863	27196349	+	0	NA	Intergenic	ETnERV-int|LTR|ERVK	-16844	NM_001042612	330490	Mm.212174	NM_194062	ENSMUSG00000040614	Nlrp9c	AA636537|BB062542|Nalp-zeta|Nalp9c	NLR family, pyrin domain containing 9C	protein-coding
common_peak2-28236-13-28--1.0795089644898-1.33403699391683	chr4	122885317	122886139	+	0	NA	exon (NM_001085502, exon 2 of 6)	exon (NM_001085502, exon 2 of 6)	6932	NM_001085502	230718	Mm.354635	NM_001085502	ENSMUSG00000054958	Nt5c1a	Cn1a|Gm49	5'-nucleotidase, cytosolic IA	protein-coding
common_peak2-26278-11-20--0.883623838527147-0.876666802405043	chr2	30743193	30743907	+	0	NA	Intergenic	MTD|LTR|MaLR	15267	NM_022415	64292	Mm.28768	NM_022415	ENSMUSG00000050737	Ptges	2410099E23Rik|D2Ertd369e|Pges|mPGES|mPGES-1	prostaglandin E synthase	protein-coding
unique_peak1-6446-9-2-1.60465090568306-1.87199725847353	chr7	99304064	99304586	+	0	NA	intron (NM_001243046, intron 4 of 14)	intron (NM_001243046, intron 4 of 14)	-79155	NM_001243047	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
common_peak1-16491-19-30--0.551508983725189-0.647723624534446	chr5	138441472	138442114	+	0	NA	Intergenic	MTA_Mm-int|LTR|MaLR	19044	NM_013478	12007	Mm.30061	NM_013478	ENSMUSG00000037053	Azgp1	Zag	alpha-2-glycoprotein 1, zinc	protein-coding
unique_peak2-37281-3-5--0.998945590680433-0.96108193396963	chr4	116750299	116750721	+	0	NA	intron (NM_001111277, intron 10 of 11)	B1_Mus1|SINE|Alu	-18451	NM_008958	19207	Mm.287037	NM_008958	ENSMUSG00000028681	Ptch2	ptc2	patched homolog 2	protein-coding
common_peak2-31906-17-24--0.425559851569687-0.427564438475253	chr9	58582280	58583164	+	0	NA	intron (NM_028598, intron 1 of 5)	L1_Mus3|LINE|L1	6644	NM_028598	73673	Mm.205196	NM_028598	ENSMUSG00000074269	Rec114	2410076I21Rik|4930527A11Rik	REC114 meiotic recombination protein	protein-coding
common_peak2-22087-62-88--0.064981972164313-0.312327239180829	chr12	79028650	79030118	+	0	NA	Intergenic	Intergenic	-298258	NM_172952	268566	Mm.341742	NM_145965	ENSMUSG00000047454	Gphn	5730552E08Rik|AI662856|BC027112|C230040D23|GPH|GPHRYN|geph	gephyrin	protein-coding
common_peak2-31764-2-11--2.50241675698448-2.32232533660526	chr9	21509945	21510477	+	0	NA	Intergenic	Intergenic	-17809	NM_001252658	16835	Mm.3213	NM_010700	ENSMUSG00000032193	Ldlr	Hlb301	low density lipoprotein receptor	protein-coding
common_peak2-20170-32-38--0.00631019964258872-0.303850168981672	chr1	171246623	171248286	+	0	NA	Intergenic	L1Md_F2|LINE|L1	214141	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
common_peak2-24008-13-15--0.221527969362231-0.308519316180257	chr16	21246026	21246802	+	0	NA	Intergenic	Intergenic	9725	NR_106145	102465781		NR_106145	miRBase:MI0025025	Mir7680	mmu-mir-7680	microRNA mir-7680	ncRNA
unique_peak2-37762-8-6-0.197867495889966-1.03789460276074	chr5	114892061	114892445	+	0	NA	intron (NM_029956, intron 2 of 8)	B1F2|SINE|Alu	1783	NM_029956	77697	Mm.105182	NM_029956	ENSMUSG00000029575	Mmab	9130222L19Rik|ATR	methylmalonic aciduria (cobalamin deficiency) type B homolog (human)	protein-coding
unique_peak2-32965-1-10--3.08648862885404-2.57096726280955	chr10	45734390	45734950	+	0	NA	Intergenic	Intergenic	207160	NR_040624	320363	Mm.123343	NR_040624		D030045P18Rik	-	RIKEN cDNA D030045P18 gene	ncRNA
common_peak2-30129-31-7-2.22523867081312-5.17358211006552	chr6	137702212	137702709	+	0	NA	promoter-TSS (NM_172733)	promoter-TSS (NM_172733)	-638	NM_172733	232449	Mm.29181	NM_172733	ENSMUSG00000030225	Dera	2010002D22Rik|2500002K03Rik|DEOC	2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	protein-coding
common_peak1-19096-10-11--0.228547155712387-0.31137425193576	chr9	71759889	71760452	+	0	NA	intron (NM_001253865, intron 3 of 14)	intron (NM_001253865, intron 3 of 14)	-16267	NM_001253863	21406	Mm.171615	NM_011544	ENSMUSG00000032228	Tcf12	A130037E08Rik|ALF1|HEB|HEBAlt|HTF-4|HTF4|ME1|REB|bHLHb20	transcription factor 12	protein-coding
common_peak1-13893-20-26--0.266812717572275-0.373496418836697	chr2	76675011	76675858	+	0	NA	intron (NM_011652, intron 152 of 312)	intron (NM_011652, intron 152 of 312)	145170	NM_028004	22138	Mm.373672	NM_011652	ENSMUSG00000051747	Ttn	1100001C23Rik|2310036G12Rik|2310057K23Rik|2310074I15Rik|AF006999|AV006427|D330041I19Rik|D830007G01Rik|L56|mdm|shru	titin	protein-coding
unique_peak1-2358-10-6-0.549060422951165-1.21398586181642	chr15	86188513	86189056	+	0	NA	intron (NM_145476, intron 9 of 12)	intron (NM_145476, intron 9 of 12)	143895	NM_145476	223754	Mm.28904	NM_145476	ENSMUSG00000051864	Tbc1d22a	BC023106|D15Ertd781e	TBC1 domain family, member 22a	protein-coding
common_peak2-30411-67-105--0.183508971780204-0.459052083208626	chr7	35802211	35803255	+	0	NA	intron (NM_008820, intron 9 of 14)	intron (NM_008820, intron 9 of 14)	38852	NM_009884	12611	Mm.273090	NM_009884	ENSMUSG00000056216	Cebpg	C/EBP[g]|C/EBPgamma|GPE1-BP|Gpe1bp|Ig/EBP	CCAAT/enhancer binding protein (C/EBP), gamma	protein-coding
common_peak2-30297-17-14-0.311405742596519-0.466170754204149	chr7	19326723	19327395	+	0	NA	Intergenic	MTC|LTR|MaLR	23620	NM_001004152	243862	Mm.389833	NM_001004152	ENSMUSG00000044903	Psg22	AA408604|cea9	pregnancy-specific glycoprotein 22	protein-coding
common_peak1-9941-49-70--0.143463296479498-0.359387569720008	chr12	108793011	108794661	+	0	NA	Intergenic	Intergenic	179862	NR_045973	74968	Mm.359821	NR_045973	ENSMUSG00000085641	4930465M20Rik	4930431H15Rik	RIKEN cDNA 4930465M20 gene	ncRNA
common_peak1-7846-122-191--0.00331014375916805-0.301596960383675	chr1	132007112	132009039	+	0	NA	intron (NM_172485, intron 16 of 27)	L1Md_F2|LINE|L1	311501	NM_007827	13137	Mm.436759	NM_007827	ENSMUSG00000026401	Daf2	AI323748|Cd55b|Daf|Daf-TM|TM-DAF	decay accelerating factor 2	protein-coding
common_peak1-11011-41-28-0.843167709721088-1.8888294360187	chr15	37030233	37031992	+	0	NA	Intergenic	Intergenic	-93955	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
common_peak2-23233-14-23--0.685746340363512-0.669502273696327	chr15	8098684	8099235	+	0	NA	intron (NM_133227, intron 28 of 34)	intron (NM_133227, intron 28 of 34)	-20147	NM_001162906	73692	Mm.164436	NM_001162906	ENSMUSG00000039801	2410089E03Rik	4732468D17Rik|b2b012Clo	RIKEN cDNA 2410089E03 gene	protein-coding
common_peak2-29482-14-23--0.685746340363512-0.669502273696327	chr6	31087787	31088520	+	0	NA	intron (NR_110471, intron 3 of 3)	intron (NR_110471, intron 3 of 3)	-75060	NR_029532	387223		NR_029532	miRBase:MI0000143	Mir29b-1	Mirn29b|Mirn29b-1	microRNA 29b-1	ncRNA
common_peak2-27703-20-34--0.641208232353773-0.863762398024911	chr3	122121784	122123302	+	0	NA	promoter-TSS (NM_013867)	promoter-TSS (NM_013867)	-155	NM_013867	29815	Mm.45815	NM_013867	ENSMUSG00000028121	Bcar3	AI131758|AND-34	breast cancer anti-estrogen resistance 3	protein-coding
unique_peak2-32905-10-12--0.344024373132323-0.340565874754526	chr10	19934193	19934805	+	0	NA	intron (NM_008635, intron 1 of 17)	intron (NM_008635, intron 1 of 17)	6254	NM_001101561	621697	Mm.440587	NM_001101561		Gm6251	EG621697	predicted gene 6251	protein-coding
common_peak2-28777-7-10--0.660340788339108-1.12966497611638	chr5	53564321	53564898	+	0	NA	intron (NM_172710, intron 7 of 23)	MER112|DNA|MER1_type	40082	NM_172710	231238	Mm.235020	NM_172710	ENSMUSG00000029189	Sel1l3	2310045A20Rik|AI429585|mKIAA0746	sel-1 suppressor of lin-12-like 3 (C. elegans)	protein-coding
common_peak1-16243-25-13-1.0544949832875-1.65862513589797	chr5	104023175	104024084	+	0	NA	intron (NM_011204, intron 46 of 47)	intron (NM_011204, intron 46 of 47)	34793	NM_029415	75750	Mm.7446	NM_029415	ENSMUSG00000029321	Slc10a6	8430417G17Rik|C78479|Soat	solute carrier family 10 (sodium/bile acid cotransporter family), member 6	protein-coding
common_peak2-23226-7-7--0.200909169701811-0.97990265578305	chr15	5196224	5196638	+	0	NA	Intergenic	PB1D10|SINE|Alu	-2244	NM_008965	19219	Mm.18509	NM_008965	ENSMUSG00000039942	Ptger4	EP4|Ptgerep4	prostaglandin E receptor 4 (subtype EP4)	protein-coding
common_peak2-26572-114-168-0.063075085426183-0.352018175442567	chr2	104492920	104494977	+	0	NA	intron (NM_145529, intron 13 of 20)	intron (NM_145529, intron 13 of 20)	58371	NM_177190	320554	Mm.249065	NM_177190	ENSMUSG00000027175	Tcp11l1	C130096D04Rik	t-complex 11 like 1	protein-coding
unique_peak1-2541-10-6-0.549060422951165-1.21398586181642	chr16	22218307	22219001	+	0	NA	Intergenic	Intergenic	47348	NM_009186	20462	Mm.210352	NM_009186		Tra2b	5730405G21Rik|D16Ertd266e|SIG-41|Sfrs10|Silg41|TRA2beta	transformer 2 beta homolog (Drosophila)	protein-coding
common_peak2-32353-32-22-0.755530063162647-1.34355844763204	chrX	94212268	94212979	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-55312	NM_001033361	245526	Mm.336164	NM_001033361	ENSMUSG00000031212	Pgr15l	-	G protein-coupled receptor 15-like	protein-coding
common_peak2-30668-28-41--0.339358302957298-0.489200556185773	chr7	101905804	101906560	+	0	NA	Intergenic	GA-rich|Low_complexity|Low_complexity	-1452965	NM_011858	23966	Mm.254610	NM_011858	ENSMUSG00000048078	Tenm4	Doc4|ELM2|Odz4|R75022|Ten-m4|l(7)-3Rn|l7Rn3|mKIAA1302	teneurin transmembrane protein 4	protein-coding
common_peak1-7687-38-34-0.442169642353564-0.82261631811054	chr1	82282607	82283947	+	0	NA	intron (NM_010570, intron 1 of 1)	intron (NM_010570, intron 1 of 1)	4737	NM_010570	16367	Mm.4952	NM_010570	ENSMUSG00000055980	Irs1	G972R|IRS-1	insulin receptor substrate 1	protein-coding
common_peak2-31090-25-34--0.26743311159986-0.387290225425543	chr8	25602267	25602936	+	0	NA	Intergenic	Intergenic	-53183	NM_026931	69068	Mm.25775	NM_026931	ENSMUSG00000056313	1810011O10Rik	1110065B09Rik|AW121743|AW321058	RIKEN cDNA 1810011O10 gene	protein-coding
unique_peak1-1866-9-1-2.18961340640422-2.31132995230379	chr14	55759594	55760189	+	0	NA	Intergenic	B3A|SINE|B2	-24119	NM_177049	319984	Mm.19047	NM_177049	ENSMUSG00000022208	Jph4	9330157P13Rik|JP-4|JPHL1	junctophilin 4	protein-coding
common_peak2-27827-25-62--1.11543001815481-2.95981958782823	chr3	146450316	146451221	+	0	NA	intron (NM_011100, intron 1 of 9)	intron (NM_011100, intron 1 of 9)	-6388	NM_001164200	18749	Mm.16766	NM_011100	ENSMUSG00000005034	Prkacb	Pkacb	protein kinase, cAMP dependent, catalytic, beta	protein-coding
common_peak2-25537-18-14-0.406028555619833-0.532159081577619	chr19	5940632	5941209	+	0	NA	TTS (NM_001164057)	TTS (NM_001164057)	-16104	NM_026772	104252	Mm.491103	NM_026772	ENSMUSG00000045664	Cdc42ep2	1110008C05Rik|Borg1|Cep2|D19Bwg1013e	CDC42 effector protein (Rho GTPase binding) 2	protein-coding
common_peak2-28853-15-16--0.075298090694683-0.301029995663976	chr5	73279619	73280187	+	0	NA	Intergenic	Intergenic	-20216	NM_001113460	21682	Mm.319581	NM_013689	ENSMUSG00000029217	Tec	-	tec protein tyrosine kinase	protein-coding
common_peak1-15189-60-65-0.309897742262078-0.728895227537735	chr3	154596377	154597757	+	0	NA	intron (NM_177066, intron 17 of 24)	intron (NM_177066, intron 17 of 24)	121304	NM_177066	435766	Mm.210428	NM_177066	ENSMUSG00000040086	Tnni3k	Cark|D830019J24Rik	TNNI3 interacting kinase	protein-coding
common_peak1-11680-45-84--0.54903291079283-1.34062813340368	chr16	30063092	30064254	+	0	NA	Intergenic	CpG	-1770	NM_008235	15205	Mm.390859	NM_008235	ENSMUSG00000022528	Hes1	Hry|bHLHb39	hairy and enhancer of split 1 (Drosophila)	protein-coding
unique_peak1-6683-9-10--0.269818212233077-1.05503135781948	chr8	25993409	25993934	+	0	NA	intron (NM_001293693, intron 14 of 19)	Lx2B|LINE|L1	-58830	NM_001272059	11499	Mm.143889	NM_007401	ENSMUSG00000031554	Adam5	tMDC II|tMDCII	a disintegrin and metallopeptidase domain 5	protein-coding
unique_peak1-7017-7-2-1.21412832957703-1.45399745587252	chr8	125410221	125410748	+	0	NA	intron (NR_037865, intron 12 of 13)	intron (NR_037865, intron 12 of 13)	38210	NM_007662	12555	Mm.1976	NM_007662	ENSMUSG00000031962	Cdh15	AI323380|Cdh14|Mcad	cadherin 15	protein-coding
unique_peak2-33070-15-27--0.795190171501948-0.918917574080418	chr10	79532732	79534014	+	0	NA	intron (NM_183426, intron 5 of 31)	B3|SINE|B2	16609	NM_001037741	625249	Mm.332810	NM_008162	ENSMUSG00000075706	Gpx4	GPx-4|GSHPx-4|PHGPx|mtPHGPx|snGPx	glutathione peroxidase 4	protein-coding
unique_peak2-33414-2-5--1.50241675698448-1.08602067057793	chr11	59184186	59184541	+	0	NA	Intergenic	Intergenic	4792	NM_001045521	216797	Mm.339586	NM_001045521	ENSMUSG00000049291	Prss38	Gm249|Mpn2	protease, serine 38	protein-coding
common_peak1-13273-29-16-1.02482723936477-1.87578206828671	chr19	37263574	37264650	+	0	NA	intron (NR_045329, intron 2 of 2)	intron (NR_045329, intron 2 of 2)	8486	NM_001290829	208922	Mm.391176	NM_198300	ENSMUSG00000039652	Cpeb3	4831444O18Rik|CPE-BP3|mKIAA0940	cytoplasmic polyadenylation element binding protein 3	protein-coding
unique_peak2-32722-5-5--0.289342836727009-0.909929411522249	chr1	160370321	160370752	+	0	NA	intron (NM_001205204, intron 1 of 22)	intron (NM_001205204, intron 1 of 22)	-65220	NR_030441	735253		NR_030441		Mir488	Mirn488|mmu-mir-488	microRNA 488	ncRNA
common_peak1-8791-38-40-0.213900654680447-0.459173512026158	chr11	17159246	17160381	+	0	NA	intron (NM_020558, intron 1 of 4)	intron (NM_020558, intron 1 of 4)	2192	NM_020558	57316	Mm.287982	NM_020558	ENSMUSG00000000581	C1d	1110036E10Rik|AI875855|SUN-CoR	C1D nuclear receptor co-repressor	protein-coding
common_peak1-11981-9-17--0.980311595038092-0.844317084070804	chr17	8508643	8509141	+	0	NA	intron (NM_134114, intron 1 of 7)	ORR1D1|LTR|MaLR	-4909	NR_073374	75060	Mm.426530	NR_073374	ENSMUSG00000087478	4930506C21Rik	-	RIKEN cDNA 4930506C21 gene	ncRNA
common_peak1-15738-23-23-0.136805003787924-0.340939137447793	chr4	148444101	148445041	+	0	NA	intron (NM_019781, intron 2 of 8)	intron (NM_019781, intron 2 of 8)	29350	NM_019781	56273	Mm.184172	NM_019781	ENSMUSG00000028975	Pex14	Pex14p|R75137	peroxisomal biogenesis factor 14	protein-coding
common_peak1-11561-47-31-0.934841424766548-2.4646419254784	chr16	11202476	11203976	+	0	NA	promoter-TSS (NR_038156)	promoter-TSS (NR_038156)	159	NM_025546	66409	Mm.28291	NM_025546	ENSMUSG00000005846	Rsl1d1	2410005K20Rik|C76439|pBK1	ribosomal L1 domain containing 1	protein-coding
common_peak2-31464-10-6-0.549060422951165-1.21398586181642	chr8	105635870	105636309	+	0	NA	Intergenic	Intergenic	235345	NR_036588	69794	Mm.396139	NR_036588		1600027J07Rik	-	RIKEN cDNA 1600027J07 gene	ncRNA
unique_peak1-3932-7-1-1.79909083029819-1.80617997398389	chr2	27334719	27335172	+	0	NA	Intergenic	B2_Mm1a|SINE|B2	-3752	NM_001113574	67382	Mm.28721	NM_023336	ENSMUSG00000026918	Brd3	2410084F24Rik|AW060456|Fsrg2|ORFX|RINGL3	bromodomain containing 3	protein-coding
unique_peak1-2774-25-9-1.53992181045774-2.70611768348013	chr17	6433711	6434654	+	0	NA	exon (NM_009342, exon 3 of 5)	exon (NM_009342, exon 3 of 5)	4922	NM_009342	21648	Mm.1948	NM_009342	ENSMUSG00000096255	Dynlt1b	AGS2|Dynlt1|Tctex-1|Tctex1	dynein light chain Tctex-type 1B	protein-coding
common_peak1-9717-20-21-0.0286431659538957-0.306080386793804	chr12	31499176	31500145	+	0	NA	Intergenic	Intergenic	-69529	NM_001159743	100294583	Mm.399726	NM_001159743	ENSMUSG00000054204	Fam150b	6230419C23Rik	family with sequence similarity 150, member B	protein-coding
unique_peak1-3494-10-5-0.771452844287613-1.33892459842472	chr19	12012939	12013438	+	0	NA	intron (NM_172635, intron 15 of 18)	B2_Mm1a|SINE|B2	14970	NR_105960	102465601		NR_105960		Mir6994	mmu-mir-6994	microRNA mir-6994	ncRNA
unique_peak2-34872-4-7--1.02346051385325-1.09384600808989	chr15	77881197	77881595	+	0	NA	intron (NM_007583, intron 1 of 3)	intron (NM_007583, intron 1 of 3)	68314	NM_007583	12300	Mm.277338	NM_007583		Cacng2	AW060990|B230105C07Rik|B930041E13Rik|stargazer|stargazin|stg|wag|waggler	calcium channel, voltage-dependent, gamma subunit 2	protein-coding
common_peak2-27586-6-4-0.24347001549294-0.989110657569874	chr3	101516023	101516307	+	0	NA	Intergenic	Intergenic	-107535	NM_144900	11928	Mm.280103	NM_144900	ENSMUSG00000033161	Atp1a1	Atpa-1|BC010319	ATPase, Na+/K+ transporting, alpha 1 polypeptide	protein-coding
unique_peak2-34446-0-30--5.79432724086109-7.71438499397482	chr14	21990268	21991289	+	0	NA	intron (NM_134079, intron 4 of 10)	B1F|SINE|Alu	95404	NM_001243041	11534	Mm.188734	NM_134079	ENSMUSG00000039197	Adk	2310026J05Rik|5033405D03Rik|AI255373|AI987814|Ak	adenosine kinase	protein-coding
unique_peak2-37068-4-22--2.54702246991026-3.28004177908661	chr3	145072013	145072408	+	0	NA	intron (NM_027770, intron 24 of 59)	intron (NM_027770, intron 24 of 59)	116774	NM_027770	71355	Mm.235570	NM_027770	ENSMUSG00000028197	Col24a1	5430404K19Rik	collagen, type XXIV, alpha 1	protein-coding
unique_peak2-33657-6-9--0.75652998450706-1.11707584880836	chr11	100111553	100112150	+	0	NA	Intergenic	Intergenic	-1635	NM_008470	16666	Mm.422799	NM_008470	ENSMUSG00000053797	Krt16	AI324768|K16|Krt1-16	keratin 16	protein-coding
common_peak2-29597-13-9-0.456543935750406-0.53895475198017	chr6	50684333	50684683	+	0	NA	Intergenic	Intergenic	-41606	NR_045984	319981	Mm.131454	NR_045984		C530044C16Rik	-	RIKEN cDNA C530044C16 gene	ncRNA
common_peak2-21828-80-88-0.374842335402954-1.08315020895014	chr11	120251577	120253764	+	0	NA	intron (NM_199469, intron 12 of 15)	intron (NM_199469, intron 12 of 15)	-12610	NM_027980	71885	Mm.274890	NM_027980	ENSMUSG00000025384	2310003H01Rik	Faap100	RIKEN cDNA 2310003H01 gene	protein-coding
common_peak2-20685-6-8--0.60452689106201-1.03789460276074	chr10	88826440	88826747	+	0	NA	Intergenic	Intergenic	80119	NM_001284344	237436	Mm.11982	NM_001033331	ENSMUSG00000074802	Gas2l3	8430435B07Rik|Gm240	growth arrest-specific 2 like 3	protein-coding
common_peak2-30153-5-8--0.874305337448166-1.10484139239135	chr6	146642114	146642394	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-31198	NM_172734	232533	Mm.322121	NM_172734	ENSMUSG00000001630	Stk38l	4930473A22Rik|B230328I19|Ndr2|Ndr54	serine/threonine kinase 38 like	protein-coding
unique_peak1-2026-12-4-1.32684789020028-2.04196296489515	chr15	10832867	10833595	+	0	NA	Intergenic	RMER19A|LTR|ERVK	-48856	NM_030888	81799	Mm.280158	NM_030888	ENSMUSG00000058914	C1qtnf3	2310005P21Rik|CORS-26|CORS26|CTRP3|Corcs|Cors	C1q and tumor necrosis factor related protein 3	protein-coding
unique_peak1-6338-11-6-0.701338662194009-1.32595962126035	chr7	49298190	49298853	+	0	NA	intron (NM_001105056, intron 4 of 5)	MTEa|LTR|MaLR	15830	NM_001105056	628444	Mm.469901	NM_001105056	ENSMUSG00000092032	Vmn2r59	EG628444	vomeronasal 2, receptor 59	protein-coding
common_peak2-22233-149-193-0.329047655048946-1.59642840989979	chr13	9763663	9765252	+	0	NA	5' UTR (NM_001199141, exon 1 of 15)	5' UTR (NM_001199141, exon 1 of 15)	103	NM_001199141	66505	Mm.397307	NM_144516	ENSMUSG00000021156	Zmynd11	2210402G22Rik|BS69	zinc finger, MYND domain containing 11	protein-coding
common_peak2-20665-86-179--0.516217302297322-2.31110890262237	chr10	84440659	84442292	+	0	NA	intron (NM_001013441, intron 6 of 8)	intron (NM_001013441, intron 6 of 8)	61117	NM_183172	237422	Mm.18936	NM_183172		Ric8b	BC051080|Ric-8|Ric-8b	resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)	protein-coding
common_peak2-25018-22-24-0.00342791531268016-0.305461879681376	chr18	23988806	23989837	+	0	NA	intron (NM_153058, intron 1 of 6)	L1Md_F3|LINE|L1	26850	NM_153058	212307	Mm.132237	NM_153058	ENSMUSG00000024277	Mapre2	AI314113|C820009F03Rik|D18Abb1e|EB1|EB2|RP1	microtubule-associated protein, RP/EB family, member 2	protein-coding
common_peak2-21488-23-32--0.322626614849373-0.436052471002795	chr11	88558020	88559141	+	0	NA	intron (NM_001201341, intron 5 of 7)	intron (NM_001201341, intron 5 of 7)	20963	NM_054043	76626	Mm.400451	NM_054043	ENSMUSG00000069769	Msi2	1700105C15Rik|AI451722|AI563628|AW489193|Msi2h	musashi RNA-binding protein 2	protein-coding
common_peak1-11716-20-32--0.55631933476726-0.705485015404196	chr16	32643844	32644570	+	0	NA	promoter-TSS (NM_016788)	promoter-TSS (NM_016788)	-522	NM_001110147	51789	Mm.251115	NM_016788	ENSMUSG00000022791	Tnk2	Ack|Ack-1|Ack1|Cdgip|Pyk1	tyrosine kinase, non-receptor, 2	protein-coding
common_peak2-23056-21-14-0.662598669657717-0.879255460030357	chr14	70343730	70344522	+	0	NA	intron (NM_028560, intron 3 of 6)	intron (NM_028560, intron 3 of 6)	103912	NM_028526	73523	Mm.23509	NM_028526	ENSMUSG00000022085	Pebp4	PEBP-4	phosphatidylethanolamine binding protein 4	protein-coding
unique_peak1-5345-17-7-1.21829633820504-1.55050753388977	chr5	91281425	91282244	+	0	NA	Intergenic	Intergenic	-38437	NM_008176	14825	Mm.21013	NM_008176	ENSMUSG00000029380	Cxcl1	Fsp|Gro1|KC|Mgsa|N51|Scyb1|gro	chemokine (C-X-C motif) ligand 1	protein-coding
unique_peak2-38777-7-12--0.901348887842903-1.31827279259406	chr7	127800502	127801141	+	0	NA	intron (NM_025899, intron 12 of 13)	intron (NM_025899, intron 12 of 13)	12943	NM_001040137	67983	Mm.394441	NM_001040136	ENSMUSG00000030887	Pdzd9	4930408O21Rik	PDZ domain containing 9	protein-coding
common_peak1-17298-9-4-0.867685311516858-1.36011389749466	chr6	137518597	137519255	+	0	NA	intron (NM_001271588, intron 1 of 20)	intron (NM_001271588, intron 1 of 20)	604	NM_001271595	13860	Mm.235346	NM_007945	ENSMUSG00000015766	Eps8	AW261790	epidermal growth factor receptor pathway substrate 8	protein-coding
unique_peak2-32896-5-9--1.02630843089322-1.21398586181642	chr10	17059675	17060117	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-244308	NR_038020	100504235	Mm.84044	NR_038020		Gm20125	-	predicted gene, 20125	ncRNA
unique_peak1-4330-11-2-1.92373108353046-2.32232533660526	chr2	152710843	152711515	+	0	NA	intron (NM_001141977, intron 12 of 17)	intron (NM_001141977, intron 12 of 17)	20376	NR_049195	100885834		NR_049195	miRBase:MI0019190	Mir5622	mmu-mir-5622	microRNA mir-5622	ncRNA
common_peak1-19159-13-18--0.469455482805817-0.409888142029227	chr9	95637386	95638009	+	0	NA	intron (NM_011643, intron 2 of 12)	intron (NM_011643, intron 2 of 12)	13080	NM_011643	22063	Mm.149633	NM_011643	ENSMUSG00000032839	Trpc1	Mtrp1|Trp1|Trrp1	transient receptor potential cation channel, subfamily C, member 1	protein-coding
common_peak1-16608-9-10--0.269818212233077-1.05503135781948	chr5	150707160	150707657	+	0	NA	Intergenic	Intergenic	57086	NR_045758	70969	Mm.78499	NR_045758		4930500F04Rik	4931407C17Rik	RIKEN cDNA 4930500F04 gene	ncRNA
unique_peak2-36952-9-16--0.897849434846119-0.732381977911291	chr3	108200518	108201141	+	0	NA	exon (NM_017392, exon 18 of 34)	exon (NM_017392, exon 18 of 34)	14073	NM_019976	56742	Mm.389499	NM_019976	ENSMUSG00000068744	Psrc1	5430413I02Rik|AL033312|Dda3	proline/serine-rich coiled-coil 1	protein-coding
common_peak1-11869-41-39-0.379220609961298-0.705686442909787	chr16	93603374	93604699	+	0	NA	promoter-TSS (NM_145482)	promoter-TSS (NM_145482)	24	NM_145482	224440	Mm.10628	NM_145482	ENSMUSG00000022948	Setd4	AY037804|C21orf18|ORF21	SET domain containing 4	protein-coding
common_peak1-10924-36-36-0.269867720538804-0.51862626278861	chr15	8189515	8190841	+	0	NA	intron (NM_001162906, intron 38 of 52)	intron (NM_001162906, intron 38 of 52)	71072	NM_001162906	73692	Mm.164436	NM_001162906	ENSMUSG00000039801	2410089E03Rik	4732468D17Rik|b2b012Clo	RIKEN cDNA 2410089E03 gene	protein-coding
common_peak1-11513-14-8-0.729291158915332-0.771068449301682	chr16	31948464	31949062	+	0	NA	promoter-TSS (NR_027897)	promoter-TSS (NR_027897)	131	NM_026554	68092	Mm.290027	NM_026554	ENSMUSG00000022774	Ncbp2	20kDa|5930413E18Rik|AA536802|AI843301|C79367	nuclear cap binding protein subunit 2	protein-coding
common_peak1-16347-15-13-0.204809828498052-0.368541233333383	chr5	120502895	120503665	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-63242	NM_028762	74111	Mm.41022	NM_028762		Rbm19	1200009A02Rik|AV302714|NPO	RNA binding motif protein 19	protein-coding
unique_peak2-37212-3-9--1.73591118484664-1.57096726280955	chr4	82507222	82507581	+	0	NA	Intergenic	Intergenic	-1836	NM_026647	68268	Mm.32047	NM_026647	ENSMUSG00000028403	Zdhhc21	9130404H11Rik|AL024349|D130004H04Rik|dep	zinc finger, DHHC domain containing 21	protein-coding
unique_peak1-2257-15-8-0.842239749113344-0.891319708951327	chr15	77824831	77825516	+	0	NA	3' UTR (NM_007583, exon 4 of 4)	3' UTR (NM_007583, exon 4 of 4)	-23919	NM_018749	55944	Mm.3955	NM_018749	ENSMUSG00000016554	Eif3d	66/67kDa|AA407891|Eif3s7|eIF3p66	eukaryotic translation initiation factor 3, subunit D	protein-coding
common_peak2-32291-21-32--0.474904854092218-0.550049347815239	chrX	36874206	36875253	+	0	NA	Intergenic	Lx6|LINE|L1	175286	NM_001177380	78631	Mm.243738	NM_001177380	ENSMUSG00000079619	Cypt15	1700085A12Rik	cysteine-rich perinuclear theca 15	protein-coding
common_peak2-28215-7-6--0.00826409175941478-0.97990265578305	chr4	118235398	118235770	+	0	NA	intron (NM_026789, intron 20 of 21)	MTB_Mm|LTR|MaLR	-19253	NM_172383	230678	Mm.23639	NM_172383	ENSMUSG00000050854	Tmem125	6330530A05Rik|AV223516	transmembrane protein 125	protein-coding
common_peak1-18310-20-23--0.0968877161299631-0.305855887145851	chr8	46868193	46869167	+	0	NA	intron (NM_172752, intron 12 of 22)	intron (NM_172752, intron 12 of 22)	35971	NR_045739	319940	Mm.441720	NR_045739	ENSMUSG00000085440	Sorbs2os	D330022K07Rik	sorbin and SH3 domain containing 2, opposite strand	ncRNA
common_peak1-10960-9-15--0.81038659359578-0.630231561310125	chr15	27465993	27466502	+	0	NA	intron (NM_020332, intron 1 of 11)	intron (NM_020332, intron 1 of 11)	-35002	NR_106065	102466808		NR_106065		Mir7117	mmu-mir-7117	microRNA mir-7117	ncRNA
common_peak2-30643-3-8--1.58390809140159-1.39487600375387	chr7	98414993	98415384	+	0	NA	intron (NM_011807, intron 1 of 22)	intron (NM_011807, intron 1 of 22)	175892	NM_011807	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
common_peak1-11823-12-8-0.478850983645327-0.562038191119709	chr16	78259940	78260660	+	0	NA	Intergenic	(TTCA)n|Simple_repeat|Simple_repeat	-4601	NR_045698	100503619	Mm.387531	NR_045698		E330011O21Rik	-	RIKEN cDNA E330011O21 gene	ncRNA
unique_peak1-4260-8-2-1.42025991722641-1.65811743852845	chr2	131205931	131206420	+	0	NA	Intergenic	L1Md_T|LINE|L1	-27547	NM_178607	51902	Mm.477523	NM_178607	ENSMUSG00000048911	Rnf24	2810473M14Rik|4930505A13Rik|AI317164|C86507|D2Ertd504e	ring finger protein 24	protein-coding
unique_peak2-34530-4-11--1.6084230145744-1.68134727924692	chr14	54863580	54864120	+	0	NA	intron (NM_010015, intron 1 of 1)	L2|LINE|L2	9754	NM_001113358	13135	Mm.319038	NM_010015	ENSMUSG00000022174	Dad1	AI323713	defender against cell death 1	protein-coding
common_peak1-14092-38-49--0.0724035304761941-0.303268666669768	chr2	122738284	122739364	+	0	NA	Intergenic	RLTR10C|LTR|ERVK	131089	NM_021507	59010	Mm.28986	NM_021507	ENSMUSG00000005803	Sqrdl	0610039J17Rik|4930557M22Rik	sulfide quinone reductase-like (yeast)	protein-coding
unique_peak2-38260-1-7--2.62705701021674-1.80617997398389	chr6	125350895	125351237	+	0	NA	Intergenic	Intergenic	-20544	NM_198604	213522	Mm.333396	NM_198604	ENSMUSG00000038167	Plekhg6	BC026778|Gm155	pleckstrin homology domain containing, family G (with RhoGef domain) member 6	protein-coding
unique_peak1-4787-7-4-0.477162735410827-1.09384600808989	chr3	131488115	131488619	+	0	NA	Intergenic	(TTC)n|Simple_repeat|Simple_repeat	259371	NM_001289477	23971	Mm.244912	NM_011863	ENSMUSG00000028032	Papss1	AI325286|Asapk|SK1	3'-phosphoadenosine 5'-phosphosulfate synthase 1	protein-coding
common_peak2-24208-11-38--1.77670863461064-3.71898806998115	chr16	76142652	76143563	+	0	NA	intron (NR_040575, intron 1 of 2)	RLTR4_MM-int|LTR|ERV1	20249	NR_040575	78215	Mm.243885	NR_040575		4930578N18Rik	-	RIKEN cDNA 4930578N18 gene	ncRNA
common_peak1-18958-88-140--0.124138943228261-0.39873313218364	chr9	52047526	52049210	+	0	NA	Intergenic	Intergenic	-72152	NM_001162921	244871	Mm.295686	NM_001162921	ENSMUSG00000035164	Zc3h12c	A230108E06|C230027N18Rik|mKIAA1726	zinc finger CCCH type containing 12C	protein-coding
common_peak1-9869-33-43--0.128094056111768-0.324581211600972	chr12	81859928	81861114	+	0	NA	intron (NM_001008423, intron 1 of 1)	intron (NM_001008423, intron 1 of 1)	1181	NM_001008423	380768	Mm.29367	NM_001008423		Ccdc177	Gm1568	coiled-coil domain containing 177	protein-coding
common_peak2-26348-47-70--0.214905694738134-0.4354024333952	chr2	36135920	36136935	+	0	NA	Intergenic	Intergenic	50481	NM_008969	19224	Mm.275434	NM_008969	ENSMUSG00000047250	Ptgs1	COX1|Cox-1|Cox-3|PGHS-1|PHS 1|Pghs1	prostaglandin-endoperoxide synthase 1	protein-coding
unique_peak2-39274-7-18--1.4488366831454-1.38887104242188	chr8	121653102	121653656	+	0	NA	intron (NM_019707, intron 7 of 13)	intron (NM_019707, intron 7 of 13)	-215059	NM_024219	68196	Mm.358714	NM_024219	ENSMUSG00000031839	Hsbp1	0610007A03Rik|AA408769|Hsp25	heat shock factor binding protein 1	protein-coding
common_peak1-17762-30-14-1.26278481388335-2.47671208917977	chr7	90059984	90060954	+	0	NA	Intergenic	MLT2B1|LTR|ERVL	44626	NM_175366	108797	Mm.306789	NM_175366	ENSMUSG00000057706	Mex3b	4931439A04Rik|M-04814|Rkhd3|mKIAA2009	mex3 homolog B (C. elegans)	protein-coding
common_peak1-14727-10-7-0.356415345008769-1.12966497611638	chr3	84039626	84040106	+	0	NA	intron (NM_001271726, intron 1 of 11)	(TG)n|Simple_repeat|Simple_repeat	-15067	NM_030706	80890	Mm.44876	NM_030706	ENSMUSG00000027993	Trim2	mKIAA0517|narf	tripartite motif-containing 2	protein-coding
common_peak1-16750-7-7--0.200909169701811-0.97990265578305	chr6	33059762	33060250	+	0	NA	Intergenic	RMER19C|LTR|ERVK	-49854	NM_025336	66075	Mm.21501	NM_025336	ENSMUSG00000053768	Chchd3	0610041L09Rik|1700039J09Rik|AW558177	coiled-coil-helix-coiled-coil-helix domain containing 3	protein-coding
common_peak1-16784-36-31-0.479321086167754-0.864252281539331	chr6	39117701	39118844	+	0	NA	intron (NM_001033430, intron 7 of 19)	intron (NM_001033430, intron 7 of 19)	38500	NM_001033430	338523	Mm.293175	NM_001033430	ENSMUSG00000042599	Kdm7a	A630082K20Rik|BB041802|ENSMUSG00000073143|Jhdm1d|mKIAA1718	lysine (K)-specific demethylase 7A	protein-coding
common_peak2-29110-11-15--0.491306415748387-0.435191258261915	chr5	123075660	123076406	+	0	NA	Intergenic	MLT1L|LTR|MaLR	-11506	NM_009879	12589	Mm.10125	NM_009879	ENSMUSG00000029469	Ift81	AW060663|Cdv-1|Cdv-1r|Cdv1	intraflagellar transport 81	protein-coding
unique_peak2-38253-2-9--2.23938235115068-1.87199725847353	chr6	125131444	125131871	+	0	NA	intron (NM_146171, intron 9 of 31)	B3|SINE|B2	4792	NR_028517	100217413		NR_028517		Scarna10	MBI-52	small Cajal body-specific RNA 10	ncRNA
unique_peak2-32767-5-7--0.704380336005853-1.01466476204226	chr1	172205410	172205961	+	0	NA	Intergenic	Lx8|LINE|L1	-1770	NM_012009	26904	Mm.57009	NM_012009	ENSMUSG00000096334	Sh2d1b1	EAT-2|EAT-2A|Eat2|Eat2a|Sh2d1b	SH2 domain protein 1B1	protein-coding
common_peak2-31221-52-75--0.139667523177886-0.355332524809432	chr8	69716273	69717165	+	0	NA	Intergenic	Lx3A|LINE|L1	-297938	NM_008673	17960	Mm.14125	NM_008673	ENSMUSG00000025588	Nat1	Nat-1	N-acetyl transferase 1	protein-coding
common_peak1-10276-130-173-0.248987586981134-0.962498984452401	chr13	58400911	58403475	+	0	NA	intron (NM_175214, intron 13 of 16)	MTC-int|LTR|MaLR	12317	NR_105788	102465191		NR_105788		Mir6369	mmu-mir-6369	microRNA mir-6369	ncRNA
common_peak2-26682-23-31--0.278232495490919-0.396392531282608	chr2	124857937	124858878	+	0	NA	Intergenic	Intergenic	-35456	NM_175034	317750	Mm.330538	NM_175034	ENSMUSG00000035183	Slc24a5	F630045L20Rik|JSX|NCKX5|NCX5|Oca6	solute carrier family 24, member 5	protein-coding
unique_peak1-1158-7-1-1.79909083029819-1.80617997398389	chr11	99059918	99060390	+	0	NA	Intergenic	Intergenic	32177	NM_020618	57376	Mm.379086	NM_020618	ENSMUSG00000037935	Smarce1	2810417B20Rik|5830412H02Rik|9030408N19Rik|Baf27	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	protein-coding
common_peak1-17215-14-17--0.270708841084668-0.328191099940267	chr6	125424243	125424931	+	0	NA	intron (NM_007657, intron 1 of 7)	RCHARR1|DNA|MER1_type	20186	NM_007657	12527	Mm.210676	NM_007657	ENSMUSG00000030342	Cd9	Tspan29	CD9 antigen	protein-coding
unique_peak2-33733-1-7--2.62705701021674-1.80617997398389	chr11	115933610	115934019	+	0	NA	intron (NM_001009573, intron 13 of 32)	B1_Mus1|SINE|Alu	5461	NM_001009573	70450	Mm.259460	NM_001009573	ENSMUSG00000057948	Unc13d	2610108D09Rik|Jinx|Munc13-4|mFLJ00067	unc-13 homolog D (C. elegans)	protein-coding
common_peak1-9399-62-70-0.261004339297402-0.61673759389873	chr11	100290407	100291961	+	0	NA	exon (NM_001102650, exon 9 of 9)	exon (NM_001102650, exon 9 of 9)	11219	NM_026561	68106	Mm.28738	NM_026561	ENSMUSG00000017176	Nt5c3b	2610037D24Rik|AI841843|C330027I04Rik|Nt5c3l	5'-nucleotidase, cytosolic IIIB	protein-coding
unique_peak1-6873-9-0-3.18961340640422-3.01029995663981	chr8	88684245	88684730	+	0	NA	Intergenic	Intergenic	319586	NM_199446	102093	Mm.237296	NM_199446	ENSMUSG00000036879	Phkb	AI463271	phosphorylase kinase beta	protein-coding
common_peak2-20097-8-10--0.454209200689727-1.078512453669	chr1	157368833	157369358	+	0	NA	Intergenic	Intergenic	-36155	NM_001145781	72482	Mm.288249	NM_026683	ENSMUSG00000033701	Acbd6	0610010G04Rik|2610100E10Rik	acyl-Coenzyme A binding domain containing 6	protein-coding
unique_peak1-4845-9-7-0.18961340640422-1.05908390183068	chr3	152592461	152592918	+	0	NA	intron (NM_012028, intron 2 of 4)	B4|SINE|B4	52482	NM_012028	26938	Mm.40915	NM_012028		St6galnac5	AI851940|Siat7e	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	protein-coding
common_peak2-27466-24-9-1.47128180788035-2.52428350728854	chr3	90598636	90599045	+	0	NA	Intergenic	Intergenic	68012	NM_207263	384997	Mm.316644	NM_207263	ENSMUSG00000042250	Pglyrp4	Gm1478|Gm413	peptidoglycan recognition protein 4	protein-coding
common_peak1-11503-52-40-0.750707985647615-1.9967981614991	chr16	4586550	4588339	+	0	NA	Intergenic	Intergenic	-7269	NM_031184	83396	Mm.134072	NM_031184	ENSMUSG00000014303	Glis2	Gli5|Klf16|Nkl	GLIS family zinc finger 2	protein-coding
common_peak2-31618-10-11--0.228547155712387-0.31137425193576	chr8	123048842	123049259	+	0	NA	intron (NM_198671, intron 1 of 15)	intron (NM_198671, intron 1 of 15)	-10707	NM_001145897	382034	Mm.334856	NM_198671	ENSMUSG00000031822	Gse1	2210013I18Rik|mKIAA0182	genetic suppressor element 1	protein-coding
common_peak1-9027-42-77--0.543072890995065-1.18246856546184	chr11	61854253	61855544	+	0	NA	intron (NM_001281818, intron 2 of 14)	L1Md_A|LINE|L1	-35628	NM_001029936	432572	Mm.458025	NM_001029936	ENSMUSG00000042331	Specc1	2810012G08Rik|B230396K10Rik|Cytsb	sperm antigen with calponin homology and coiled-coil domains 1	protein-coding
unique_peak2-37420-7-7--0.200909169701811-0.97990265578305	chr4	149307980	149308442	+	0	NA	intron (NM_029035, intron 1 of 2)	intron (NM_029035, intron 1 of 2)	20904	NM_029035	74646	Mm.30	NM_029035	ENSMUSG00000039911	Spsb1	1110014L01Rik|4930422J18Rik|AI596360|AI854583|SSB-1|SSB1	splA/ryanodine receptor domain and SOCS box containing 1	protein-coding
common_peak1-16397-30-45--0.35388654656514-0.51862626278861	chr5	124445394	124446418	+	0	NA	promoter-TSS (NR_105999)	promoter-TSS (NR_105999)	-955	NR_105999	102465625		NR_105999		Mir7032	mmu-mir-7032	microRNA mir-7032	ncRNA
common_peak1-12059-10-11--0.228547155712387-0.31137425193576	chr17	23598524	23599032	+	0	NA	intron (NM_001104581, intron 5 of 5)	L1_Mus1|LINE|L1	17786	NM_001104581	619788	Mm.469847	NM_001104581	ENSMUSG00000091407	Vmn2r117	EG619788|V2Rp6	vomeronasal 2, receptor 117	protein-coding
unique_peak1-7385-14-0-3.89921616035764-4.8164799306237	chrX	75758850	75759343	+	0	NA	intron (NM_027322, intron 2 of 3)	IAP-d-int|LTR|ERVK	70048	NM_001164275	546336	Mm.211712	NM_027322	ENSMUSG00000047996	Prrg1	2010007L08Rik	proline rich Gla (G-carboxyglutamic acid) 1	protein-coding
common_peak1-12785-110-171--0.0242669943234537-0.303584683819975	chr18	63691159	63693127	+	0	NA	Intergenic	Intergenic	-145306	NM_001039485	667742	Mm.158720	NM_172629	ENSMUSG00000041482	Piezo2	5930434P17|9030411M15Rik|9430028L06Rik|Fam38b|Fam38b2	piezo-type mechanosensitive ion channel component 2	protein-coding
unique_peak2-35722-6-6--0.241956811677302-0.947717972411649	chr18	34782682	34783040	+	0	NA	intron (NM_001289606, intron 2 of 20)	intron (NM_001289606, intron 2 of 20)	-1417	NM_001166407	19348	Mm.258846	NM_009004	ENSMUSG00000003779	Kif20a	AA415432|Rab6kifl	kinesin family member 20A	protein-coding
unique_peak1-7150-10-5-0.771452844287613-1.33892459842472	chr9	57638962	57639524	+	0	NA	3' UTR (NM_019689, exon 8 of 8)	3' UTR (NM_019689, exon 8 of 8)	-25576	NM_007713	102414	Mm.25720	NM_007713	ENSMUSG00000032316	Clk3	AI256811	CDC-like kinase 3	protein-coding
common_peak1-14091-36-58--0.403321963194087-0.65827215096213	chr2	122701682	122703017	+	0	NA	Intergenic	RMER6A|LTR|ERVK	94614	NM_021507	59010	Mm.28986	NM_021507	ENSMUSG00000005803	Sqrdl	0610039J17Rik|4930557M22Rik	sulfide quinone reductase-like (yeast)	protein-coding
common_peak2-29197-28-34--0.0763238971235038-0.304271119602326	chr5	136054203	136055128	+	0	NA	Intergenic	B3|SINE|B2	-5752	NM_019577	56221	Mm.31505	NM_019577	ENSMUSG00000004814	Ccl24	CKb-6|MPIF-2|Scya24	chemokine (C-C motif) ligand 24	protein-coding
unique_peak2-34078-5-8--0.874305337448166-1.10484139239135	chr13	5826194	5826604	+	0	NA	Intergenic	Intergenic	30939	NR_045891	71867	Mm.179181	NR_045891		1700016G22Rik	-	RIKEN cDNA 1700016G22 gene	ncRNA
unique_peak2-39316-4-6--0.830815435910851-0.989110657569874	chr8	124897148	124897506	+	0	NA	Intergenic	Intergenic	-3189	NM_001029994	76014	Mm.241489	NM_001029993	ENSMUSG00000017478	Zc3h18	1190001B23Rik|5830416A07Rik|Nhn1	zinc finger CCCH-type containing 18	protein-coding
unique_peak1-3839-7-1-1.79909083029819-1.80617997398389	chr2	4445198	4445735	+	0	NA	intron (NM_172475, intron 7 of 22)	intron (NM_172475, intron 7 of 22)	-35334	NM_001177844	209630	Mm.37932	NM_172475	ENSMUSG00000026657	Frmd4a	2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|OTTMUSG00000010806|mKIAA1294	FERM domain containing 4A	protein-coding
unique_peak2-33851-3-12--2.11442280810037-2.15846853396659	chr12	17266415	17267041	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-6673	NM_027959	71853	Mm.222825	NM_027959	ENSMUSG00000020571	Pdia6	1700015E05Rik|AL023058|C77895|CaBP5|P5|Txndc7	protein disulfide isomerase associated 6	protein-coding
common_peak1-12115-30-16-1.08221256824153-2.01522565129858	chr17	26602903	26603839	+	0	NA	Intergenic	Intergenic	42046	NM_013642	19252	Mm.239041	NM_013642	ENSMUSG00000024190	Dusp1	3CH134|MKP1|Ptpn16|U19515|erp|mkp-1	dual specificity phosphatase 1	protein-coding
unique_peak2-37484-4-8--1.19338551529556-1.21878474469819	chr5	5261286	5261620	+	0	NA	intron (NM_011074, intron 2 of 14)	intron (NM_011074, intron 2 of 14)	118798	NM_011074	18647	Mm.389061	NM_011074	ENSMUSG00000028926	Cdk14	Pftk1|mKIAA0834	cyclin-dependent kinase 14	protein-coding
unique_peak2-33700-9-8-0.0196884049619079-1.03275496310833	chr11	106573064	106573556	+	0	NA	intron (NM_001032378, intron 2 of 13)	intron (NM_001032378, intron 2 of 13)	3285	NM_001032378	18613	Mm.343951	NM_008816	ENSMUSG00000020717	Pecam1	C85791|Cd31|PECAM-1|Pecam	platelet/endothelial cell adhesion molecule 1	protein-coding
unique_peak1-2984-27-10-1.53211433225794-2.93261892307636	chr17	78392520	78394011	+	0	NA	Intergenic	L1_Mur1|LINE|L1	-206323	NM_015800	50766	Mm.311912	NM_015800	ENSMUSG00000024074	Crim1	AU015004	cysteine rich transmembrane BMP regulator 1 (chordin like)	protein-coding
unique_peak1-5408-12-0-3.64877598508764-4.21441993929574	chr5	107759556	107760102	+	0	NA	promoter-TSS (NM_054054)	promoter-TSS (NM_054054)	-384	NM_001079873	114642	Mm.182836	NM_054054	ENSMUSG00000029279	Brdt	7420412D09Rik|Brd6|Fsrg3	bromodomain, testis-specific	protein-coding
common_peak2-25475-24-17-0.623284901325404-0.890873221665474	chr19	4625125	4625710	+	0	NA	TTS (NM_001033447)	TTS (NM_001033447)	200	NM_023131	19671	Mm.391143	NM_023131	ENSMUSG00000024889	Rce1	D19Ertd283e|D19Ertd98e	RCE1 homolog, prenyl protein peptidase (S. cerevisiae)	protein-coding
unique_peak1-5879-11-4-1.18676548936425-1.68134727924692	chr6	86499641	86500254	+	0	NA	intron (NR_037960, intron 3 of 4)	B1_Mur2|SINE|Alu	22552	NR_037961	72012	Mm.349174	NR_037960	ENSMUSG00000097048	1600020E01Rik	-	RIKEN cDNA 1600020E01 gene	ncRNA
common_peak2-30573-7-5-0.214128329577033-1.01466476204226	chr7	79936023	79936472	+	0	NA	Intergenic	Intergenic	310707	NR_046024	625243	Mm.261798	NR_046024		Gm6567	-	predicted gene 6567	ncRNA
unique_peak1-4103-13-0-3.77847203063777-4.51544993495972	chr2	75696533	75697185	+	0	NA	intron (NM_172666, intron 6 of 19)	intron (NM_172666, intron 6 of 19)	26625	NM_172666	228061	Mm.31227	NM_172666	ENSMUSG00000042410	Agps	5832437L22|9930035G10Rik|AW123847|Adaps|Adas|Adhaps|Adps|Aldhpsy|bs2	alkylglycerone phosphate synthase	protein-coding
unique_peak1-1483-11-2-1.92373108353046-2.32232533660526	chr12	116580330	116580900	+	0	NA	Intergenic	Intergenic	353390	NR_105810	102465205		NR_105810	miRBase:MI0021920	Mir6388	mmu-mir-6388	microRNA mir-6388	ncRNA
unique_peak1-3913-7-3-0.799090830298189-1.23214870625617	chr2	24368101	24368624	+	0	NA	Intergenic	Intergenic	-37243	NM_011040	18510	Mm.2533	NM_011040	ENSMUSG00000026976	Pax8	Pax-8	paired box 8	protein-coding
unique_peak1-1740-10-2-1.77145284428761-2.09384600808989	chr13	101965894	101966375	+	0	NA	Intergenic	Intergenic	-35948	NR_046158	328324	Mm.402274	NR_046158		5930438M14Rik	5930438M14	RIKEN cDNA 5930438M14 gene	ncRNA
common_peak2-30828-14-28--0.958764834769927-1.16796998271031	chr7	130865835	130866711	+	0	NA	Intergenic	MERVK26-int|LTR|ERVK	-222310	NM_001081329	210162	Mm.135397	NM_175435	ENSMUSG00000030757	Zkscan2	9430065N20Rik|AW493225|Zfp694	zinc finger with KRAB and SCAN domains 2	protein-coding
unique_peak2-37207-3-5--0.998945590680433-0.96108193396963	chr4	70386689	70386988	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-190876	NM_172694	230316	Mm.251188	NM_172694		Megf9	4933405H16Rik|9630025C07|Egfl5|mKIAA0818	multiple EGF-like-domains 9	protein-coding
unique_peak2-35833-2-11--2.50241675698448-2.32232533660526	chr18	67390711	67391075	+	0	NA	intron (NM_172630, intron 4 of 10)	B1_Mm|SINE|Alu	14591	NM_172630	225651	Mm.235792	NM_172630	ENSMUSG00000062526	Mppe1	A530095G11	metallophosphoesterase 1	protein-coding
common_peak1-9932-9-6-0.382258484346616-1.11707584880836	chr12	104864582	104865096	+	0	NA	exon (NM_144834, exon 3 of 5)	exon (NM_144834, exon 3 of 5)	4776	NM_144834	217847	Mm.29094	NM_144834	ENSMUSG00000061947	Serpina10	PZI|ZPI	serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10	protein-coding
common_peak2-20839-16-20--0.274053780510699-0.353907621462756	chr11	29130695	29131408	+	0	NA	intron (NM_025740, intron 4 of 9)	intron (NM_025740, intron 4 of 9)	16221	NM_025740	216618	Mm.128663	NM_025740	ENSMUSG00000020462	Ccdc104	2300003H10|4931428D14Rik	coiled-coil domain containing 104	protein-coding
common_peak1-19458-49-64--0.0160839900032705-0.301029995663976	chrX	103980350	103981783	+	0	NA	Intergenic	Lx2A1|LINE|L1	54916	NM_199468	213436	Mm.85581	NM_199468	ENSMUSG00000047686	Zcchc5	D430021I08Rik|Gm375|Mar3|Mart3|ZHC5	zinc finger, CCHC domain containing 5	protein-coding
common_peak1-16705-21-22-0.0459273092092225-0.319918318021793	chr6	22355582	22356498	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-49959	NM_138587	27999	Mm.490307	NM_138587	ENSMUSG00000029672	Fam3c	D6Wsu176e|Ilei	family with sequence similarity 3, member C	protein-coding
unique_peak2-34022-5-6--0.511735258063458-0.947717972411649	chr12	108275807	108276221	+	0	NA	Intergenic	Intergenic	-321480	NR_015512	71033	Mm.159404	NR_015512	ENSMUSG00000085820	4933406K04Rik	4930426M03Rik|4930485I22Rik|4933427G14Rik	RIKEN cDNA 4933406K04 gene	ncRNA
unique_peak2-36097-6-7--0.434601889619698-0.97990265578305	chr19	58978526	58979059	+	0	NA	Intergenic	Intergenic	7457	NR_037247	100526480		NR_037247		Mir3086	mmu-mir-3086	microRNA 3086	ncRNA
common_peak1-17585-16-12-0.417823924126969-0.489164546851866	chr7	41392670	41393395	+	0	NA	Intergenic	Intergenic	-2079820	NM_001013810	434171	Mm.60990	NM_001013810	ENSMUSG00000060565	Gm5591	EG434171	predicted gene 5591	protein-coding
common_peak2-27675-14-15--0.100783839642355-0.301029995663982	chr3	116562805	116563434	+	0	NA	intron (NM_001113478, intron 1 of 16)	intron (NM_001113478, intron 1 of 16)	634	NM_001113478	20321	Mm.66293	NM_009146	ENSMUSG00000033386	Frrs1	AI131732|Sdfr2	ferric-chelate reductase 1	protein-coding
common_peak2-23671-60-27-1.54693693956293-6.6133687752674	chr15	85663681	85664796	+	0	NA	intron (NM_001033337, intron 2 of 13)	B2_Mm2|SINE|B2	1504	NM_001033337	239570	Mm.151748	NM_001033337	ENSMUSG00000035944	Ttc38	9030019H09	tetratricopeptide repeat domain 38	protein-coding
common_peak1-14613-9-10--0.269818212233077-1.05503135781948	chr3	52101439	52101967	+	0	NA	intron (NM_019739, intron 1 of 2)	intron (NM_019739, intron 1 of 2)	29444	NM_019739	56458	Mm.29891	NM_019739	ENSMUSG00000044167	Foxo1	AI876417|Afxh|FKHR|Fkhr1|Foxo1a	forkhead box O1	protein-coding
common_peak2-23665-12-19--0.673152109799724-0.546772548767014	chr15	85613546	85614385	+	0	NA	intron (NM_011144, intron 3 of 7)	MTE2a|LTR|MaLR	28162	NM_001164626	72355	Mm.33706	NM_197998	ENSMUSG00000064284	Cdpf1	2210021J22Rik	cysteine rich, DPF motif domain containing 1	protein-coding
unique_peak2-37971-9-9--0.132314688483142-1.03275496310833	chr6	124812777	124813357	+	0	NA	intron (NM_013533, intron 1 of 4)	intron (NM_013533, intron 1 of 4)	868	NM_013533	14788	Mm.2514	NM_013533	ENSMUSG00000038390	Gpr162	A-2|BC031437|Grca	G protein-coupled receptor 162	protein-coding
common_peak2-20393-16-15-0.118263642268062-0.328191099940264	chr10	20105030	20105949	+	0	NA	Intergenic	Intergenic	37864	NM_027930	71804	Mm.262151	NM_027930	ENSMUSG00000019992	Mtfr2	2610016C23Rik|4933412C16Rik|Dufd1|Fam54a	mitochondrial fission regulator 2	protein-coding
common_peak1-9721-96-121-0.235313876792442-0.735050923371357	chr12	31949248	31950641	+	0	NA	promoter-TSS (NM_008482)	promoter-TSS (NM_008482)	-215	NM_008482	16777	Mm.172674	NM_008482	ENSMUSG00000002900	Lamb1	C77966|C80098|C81607|D130003D08Rik|Lamb-1|Lamb1-1	laminin B1	protein-coding
unique_peak1-1099-28-10-1.59352750118417-3.11713623526325	chr11	89024693	89026141	+	0	NA	Intergenic	Intergenic	90262	NM_001033266	217071	Mm.342127	NM_001033266	ENSMUSG00000072553	Gm525	-	predicted gene 525	protein-coding
common_peak2-29681-85-103-0.254963529983559-0.723492533298712	chr6	72439009	72440580	+	0	NA	Intergenic	Intergenic	-50242	NM_145569	232087	Mm.29815	NM_145569	ENSMUSG00000053907	Mat2a	D630045P18Rik	methionine adenosyltransferase II, alpha	protein-coding
common_peak1-8871-25-15-0.861849905345106-1.28534286439186	chr11	40446515	40447597	+	0	NA	Intergenic	Intergenic	59128	NM_134017	108645	Mm.293771	NM_134017	ENSMUSG00000042032	Mat2b	1110064C04Rik|2410018D16Rik|AI182287|AU022853|MAT-II|MATIIbeta|TGR	methionine adenosyltransferase II, beta	protein-coding
unique_peak1-2371-13-3-1.77847203063777-2.58603100924543	chr15	94966624	94967290	+	0	NA	intron (NR_015482, intron 2 of 2)	intron (NR_015482, intron 2 of 2)	12792	NR_015482	100043315	Mm.159041	NR_015482		LOC100043315	-	uncharacterized LOC100043315	ncRNA
unique_peak2-34487-3-10--1.87341470859657-1.75805390616669	chr14	40966355	40966857	+	0	NA	Intergenic	Intergenic	497655	NR_045936	73591	Mm.65499	NR_045936		1700109I08Rik	-	RIKEN cDNA 1700109I08 gene	ncRNA
unique_peak2-33761-6-5--0.0195643903408542-0.947717972411649	chr11	117820348	117820703	+	0	NA	Intergenic	Intergenic	10155	NM_007707	12702	Mm.3468	NM_007707	ENSMUSG00000053113	Socs3	Cis3|Cish3|EF-10|Ef10|SSI-3|Ssi3	suppressor of cytokine signaling 3	protein-coding
unique_peak1-4772-33-7-2.33133756252553-5.85892640211067	chr3	123063977	123065042	+	0	NA	intron (NM_027135, intron 21 of 22)	intron (NM_027135, intron 21 of 22)	24399	NM_201638	210529	Mm.260039	NM_201638	ENSMUSG00000028114	Mettl14	G430022H21Rik|mKIAA1627	methyltransferase like 14	protein-coding
common_peak2-26643-23-24-0.0779113147343562-0.318406410381916	chr2	119662570	119663443	+	0	NA	Intergenic	Intergenic	37756	NM_019392	22174	Mm.2901	NM_019392	ENSMUSG00000027298	Tyro3	AI323366|Brt|Dtk|Etk-2|Rse|Sky|TK19-2|Tif|etk2/tyro3	TYRO3 protein tyrosine kinase 3	protein-coding
unique_peak1-2012-7-1-1.79909083029819-1.80617997398389	chr15	6636159	6636598	+	0	NA	Intergenic	ORR1B2|LTR|MaLR	-22003	NM_030168	78757	Mm.275811	NM_030168	ENSMUSG00000050310	Rictor	4921505C17Rik|6030405M08Rik|AVO3|AW492497|D530039E11Rik	RPTOR independent companion of MTOR, complex 2	protein-coding
unique_peak2-39905-1-9--2.94898510510411-2.31132995230379	chrX	95992944	95993469	+	0	NA	intron (NM_052976, intron 3 of 24)	intron (NM_052976, intron 3 of 24)	93118	NM_052976	94190	Mm.254336	NM_052976		Ophn1	C130037N19Rik	oligophrenin 1	protein-coding
common_peak2-31722-15-47--1.5727977501655-3.76198415239266	chr9	7764091	7764823	+	0	NA	intron (NM_133739, intron 1 of 4)	CpG	380	NM_133739	71929	Mm.283293	NM_133739	ENSMUSG00000050912	Tmem123	2310075C12Rik	transmembrane protein 123	protein-coding
common_peak2-22825-33-50--0.341087779445966-0.542803625802499	chr14	20082283	20083349	+	0	NA	Intergenic	MTE2a|LTR|MaLR	338993	NM_001024706	432825	Mm.327147	NM_001024706	ENSMUSG00000095024	Gm5458	EG432825	predicted gene 5458	protein-coding
common_peak2-20010-37-57--0.331987923641753-0.556612435105728	chr1	135146296	135147604	+	0	NA	non-coding (NR_037984, exon 4 of 4)	non-coding (NR_037984, exon 4 of 4)	4276	NM_182930	240753	Mm.253559	NM_182930	ENSMUSG00000041757	Plekha6	9530028L01Rik|AU042621|Pepp3	pleckstrin homology domain containing, family A member 6	protein-coding
common_peak1-8929-110-169--0.00739317575905751-0.301029995663896	chr11	52098612	52100015	+	0	NA	Intergenic	MIR|SINE|MIR	-3561	NM_009331	21414	Mm.31630	NM_009331	ENSMUSG00000000782	Tcf7	AI465550|TCF-1|Tcf1	transcription factor 7, T cell specific	protein-coding
unique_peak2-36721-5-8--0.874305337448166-1.10484139239135	chr3	52267712	52268100	+	0	NA	Intergenic	Intergenic	195647	NM_019739	56458	Mm.29891	NM_019739	ENSMUSG00000044167	Foxo1	AI876417|Afxh|FKHR|Fkhr1|Foxo1a	forkhead box O1	protein-coding
common_peak2-27922-8-7-0.00522241794757061-1.00793137938329	chr4	11486086	11486496	+	0	NA	intron (NM_001039556, intron 1 of 14)	CpG	224	NM_001256145	623474	Mm.491200	NM_177285	ENSMUSG00000078773	Rad54b	E130016E03Rik	RAD54 homolog B (S. cerevisiae)	protein-coding
unique_peak1-3044-10-0-3.35641534500877-3.31132995230379	chr18	5413526	5414020	+	0	NA	Intergenic	Intergenic	-79336	NM_178722	240186	Mm.118257	NM_178722	ENSMUSG00000050945	Zfp438	9430031G09|9430091M14Rik|B830013J05Rik	zinc finger protein 438	protein-coding
common_peak1-14986-24-14-0.886319307159198-1.33403699391683	chr3	107736941	107737760	+	0	NA	Intergenic	B4A|SINE|B4	-2687	NM_026672	68312	Mm.458189	NM_026672	ENSMUSG00000004035	Gstm7	0610005A07Rik|AI894236|Cd203c	glutathione S-transferase, mu 7	protein-coding
common_peak2-25221-7-6--0.00826409175941478-0.97990265578305	chr18	61626553	61626866	+	0	NA	Intergenic	U6|snRNA|snRNA	17552	NR_045419	442846	Mm.417648	NR_045419		A530050N04Rik	-	RIKEN cDNA A530050N04 gene	ncRNA
unique_peak2-35273-4-7--1.02346051385325-1.09384600808989	chr17	3442610	3443001	+	0	NA	intron (NM_001122998, intron 9 of 26)	intron (NM_001122998, intron 9 of 26)	-39510	NM_001286758	24001	Mm.137134	NM_011878	ENSMUSG00000023800	Tiam2	3000002F19Rik|STEF|mKIAA2016	T cell lymphoma invasion and metastasis 2	protein-coding
common_peak2-32350-181-345--0.167249281437105-0.75651827403703	chrX	94122007	94123945	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-144959	NM_001033361	245526	Mm.336164	NM_001033361	ENSMUSG00000031212	Pgr15l	-	G protein-coupled receptor 15-like	protein-coding
common_peak2-28971-22-13-0.8399291830298-1.1381569562463	chr5	104023623	104024410	+	0	NA	intron (NM_011204, intron 47 of 47)	AT_rich|Low_complexity|Low_complexity	34406	NM_029415	75750	Mm.7446	NM_029415	ENSMUSG00000029321	Slc10a6	8430417G17Rik|C78479|Soat	solute carrier family 10 (sodium/bile acid cotransporter family), member 6	protein-coding
common_peak1-10820-18-9-0.990991056340989-1.23014042908325	chr14	99364356	99364919	+	0	NA	Intergenic	Intergenic	80718	NM_175245	76789	Mm.38912	NM_175245	ENSMUSG00000033186	Mzt1	2410129H14Rik|AI120158|Mozart1	mitotic spindle organizing protein 1	protein-coding
common_peak2-31554-20-26--0.266812717572275-0.373496418836697	chr8	111940686	111941435	+	0	NA	Intergenic	Intergenic	-76252	NR_002928	384864	Mm.390083	NR_002928		Gm1943	-	WD repeat domain 70 pseudogene	pseudo
common_peak1-16070-21-24--0.0743669245084888-0.301029995663979	chr5	52833940	52834961	+	0	NA	intron (NM_001256059, intron 1 of 11)	RLTR1D|LTR|ERV1	28332	NM_001256059	100503884	Mm.332379	NM_001256059	ENSMUSG00000045790	Ccdc149	Gm447	coiled-coil domain containing 149	protein-coding
unique_peak1-6023-7-0-2.79909083029819-2.40823996531185	chr6	112870332	112870808	+	0	NA	intron (NM_080448, intron 1 of 21)	intron (NM_080448, intron 1 of 21)	26690	NM_080448	259302	Mm.236401	NM_080448	ENSMUSG00000030257	Srgap3	AI452337|Arhgap14|D130026O08Rik|Gbi|MEGAP|WRP|mKIAA0411	SLIT-ROBO Rho GTPase activating protein 3	protein-coding
unique_peak2-39819-4-11--1.6084230145744-1.68134727924692	chrX	37130450	37130697	+	0	NA	Intergenic	L1_Mus4|LINE|L1	86208	NM_001191032	100504400	Mm.373409	NM_001191032	ENSMUSG00000095240	Cypt14	-	cysteine-rich perinuclear theca 14	protein-coding
common_peak1-11063-9-8-0.0196884049619079-1.03275496310833	chr15	57752913	57753414	+	0	NA	intron (NM_001081396, intron 3 of 20)	Lx9|LINE|L1	9409	NM_001167679	210544	Mm.390835	NM_199300	ENSMUSG00000022364	Tbc1d31	4B3|D330013L20Rik|Gm85|Wdr67	TBC1 domain family, member 31	protein-coding
unique_peak2-39543-3-7--1.41398308995928-1.23214870625617	chr9	67483594	67484004	+	0	NA	Intergenic	Intergenic	-76289	NM_001081242	70549	Mm.33645	NM_027458	ENSMUSG00000052698	Tln2	5730421P04Rik|AI507121|AI787438|AL118320|mKIAA0320	talin 2	protein-coding
common_peak1-14007-30-22-0.64611345343486-1.04213512323541	chr2	106973951	106974825	+	0	NA	Intergenic	L1Md_A|LINE|L1	-74580	NM_008045	14308	Mm.249525	NM_008045	ENSMUSG00000027120	Fshb	FSH|Fshbeta	follicle stimulating hormone beta	protein-coding
unique_peak1-5370-8-4-0.683294323060208-1.21878474469819	chr5	97995756	97996283	+	0	NA	intron (NR_045981, intron 6 of 7)	intron (NR_045981, intron 6 of 7)	-109992	NM_010294	14626	Mm.61206	NM_010294	ENSMUSG00000050553	Gk2	GKTA|Gk-rs2	glycerol kinase 2	protein-coding
common_peak1-17882-12-8-0.478850983645327-0.562038191119709	chr7	118277772	118278257	+	0	NA	Intergenic	RLTR23|LTR|ERV1	-11825	NR_015573	75479	Mm.381620	NR_015573		1700012D14Rik	-	RIKEN cDNA 1700012D14 gene	ncRNA
unique_peak1-4939-25-1-3.86184990534511-7.42783416306327	chr4	75148132	75148994	+	0	NA	Intergenic	(CAAAA)n|Simple_repeat|Simple_repeat	-224373	NM_025849	66928	Mm.24332	NM_025849	ENSMUSG00000028398	Tmem261	1700027K24Rik|3110001D03Rik	transmembrane protein 261	protein-coding
unique_peak2-38938-9-40--2.16793859821386-4.9024740998743	chr8	25068147	25069376	+	0	NA	intron (NM_177086, intron 5 of 6)	intron (NM_177086, intron 5 of 6)	288628	NM_177086	320158	Mm.121274	NM_177086	ENSMUSG00000037492	Zmat4	9630048M01Rik	zinc finger, matrin type 4	protein-coding
common_peak1-13949-23-19-0.399839409621718-0.538442145997695	chr2	91115209	91115969	+	0	NA	intron (NM_001166024, intron 16 of 16)	intron (NM_001166024, intron 16 of 16)	10317	NM_023854	77038	Mm.43636	NM_023854	ENSMUSG00000027255	Arfgap2	2310032E02Rik|Zfp289	ADP-ribosylation factor GTPase activating protein 2	protein-coding
common_peak1-12857-8-9--0.316705676939792-1.03275496310833	chr18	75363417	75363923	+	0	NA	intron (NM_027727, intron 14 of 16)	intron (NM_027727, intron 14 of 16)	93301	NR_045394	100503117	Mm.250517	NR_045393		2010010A06Rik	5033420E22Rik	RIKEN cDNA 2010010A06 gene	ncRNA
common_peak2-24507-8-8--0.164702583494742-1.00793137938329	chr17	26534008	26534521	+	0	NA	Intergenic	(TC)n|Simple_repeat|Simple_repeat	-17646	NM_001081656	240055	Mm.133211	NM_001081656	ENSMUSG00000034413	Neurl1b	C230078M08Rik|EG240055	neuralized homolog 1b (Drosophila)	protein-coding
unique_peak1-6306-11-4-1.18676548936425-1.68134727924692	chr7	38017941	38018597	+	0	NA	Intergenic	Intergenic	535132	NM_172298	243931	Mm.44141	NM_172298	ENSMUSG00000021217	Tshz3	A630038G13Rik|Tsh3|Zfp537|mKIAA1474|teashirt3	teashirt zinc finger family member 3	protein-coding
common_peak2-28047-8-6-0.197867495889966-1.03789460276074	chr4	57957581	57958004	+	0	NA	intron (NM_011660, intron 4 of 4)	B1F|SINE|Alu	11491	NM_011660	22166	Mm.260618	NM_011660	ENSMUSG00000028367	Txn1	ADF|AW550880|Trx1|Txn	thioredoxin 1	protein-coding
unique_peak2-39809-4-7--1.02346051385325-1.09384600808989	chrX	35889509	35889888	+	0	NA	intron (NM_001110142, intron 22 of 22)	intron (NM_001110142, intron 22 of 22)	39675	NM_028288	72584	Mm.327675	NM_028288		Cul4b	2700050M05Rik|AA409770|CUL-4B|mKIAA0695	cullin 4B	protein-coding
common_peak1-15265-21-22-0.0459273092092225-0.319918318021793	chr4	25281058	25281975	+	0	NA	Intergenic	Intergenic	-72548	NM_026194	67490	Mm.226295	NM_026194	ENSMUSG00000040359	Ufl1	1810074P20Rik|AI429228|Kiaa0776|Maxer|Rcad|mKIAA0776	UFM1 specific ligase 1	protein-coding
unique_peak1-6895-19-12-0.702247608520594-0.840839978588874	chr8	94871836	94872738	+	0	NA	intron (NR_110452, intron 2 of 3)	intron (NR_110452, intron 2 of 3)	7732	NR_110452	71296	Mm.86664	NR_033641	ENSMUSG00000031736	Crnde	4933436C20Rik	colorectal neoplasia differentially expressed (non-protein coding)	ncRNA
common_peak2-28371-55-41-0.812302448373941-2.38651324195789	chr4	137642062	137643346	+	0	NA	intron (NM_001256198, intron 5 of 32)	intron (NM_001256198, intron 5 of 32)	-76420	NR_105825	102466907		NR_105825		Mir6399	mmu-mir-6399	microRNA mir-6399	ncRNA
common_peak1-18542-21-20-0.177171842487475-0.380101753845079	chr8	94857171	94858071	+	0	NA	intron (NR_110452, intron 3 of 3)	intron (NR_110452, intron 3 of 3)	22398	NR_110452	71296	Mm.86664	NR_033641	ENSMUSG00000031736	Crnde	4933436C20Rik	colorectal neoplasia differentially expressed (non-protein coding)	ncRNA
common_peak2-24773-11-32--1.53570053510684-2.62629506227042	chr17	56626250	56626907	+	0	NA	Intergenic	Intergenic	-10675	NM_011218	19280	Mm.258771	NM_011218	ENSMUSG00000013236	Ptprs	AL022616|PTP|PTP-NU3|PTPNU-3|PTPsigma|Ptpt9|R-PTP-S|RPTPsigma	protein tyrosine phosphatase, receptor type, S	protein-coding
common_peak1-9039-22-12-0.946844386946312-1.31435121412491	chr11	62648605	62649750	+	0	NA	intron (NM_053169, intron 3 of 5)	intron (NM_053169, intron 3 of 5)	-11448	NM_001033669	213980	Mm.482259	NM_001033669	ENSMUSG00000090173	Fbxw10	Fbw10|HREP|SM25H2|SM2SH2	F-box and WD-40 domain protein 10	protein-coding
unique_peak1-632-8-2-1.42025991722641-1.65811743852845	chr10	32889747	32890272	+	0	NA	intron (NM_029726, intron 4 of 37)	intron (NM_029726, intron 4 of 37)	86154	NR_040657	442820	Mm.490725	NR_040657		D830005E20Rik	-	RIKEN cDNA D830005E20 gene	ncRNA
common_peak2-20147-43-83--0.609754237255058-1.54328506332033	chr1	168429267	168432138	+	0	NA	Intergenic	Intergenic	-2983	NM_001164306	226601	Mm.475593	NM_001164306	ENSMUSG00000086056	Gm4846	EG226601|Fmo13	predicted gene 4846	protein-coding
common_peak1-15172-10-10--0.103016273628528-0.301029995663987	chr3	152149974	152150497	+	0	NA	intron (NM_001081277, intron 10 of 13)	intron (NM_001081277, intron 10 of 13)	90587	NM_001287139	108946	Mm.379292	NM_198416	ENSMUSG00000039068	Zzz3	3110065C23Rik|6430567E01Rik|AA408566|AI481057|AW556059|R75514	zinc finger, ZZ domain containing 3	protein-coding
common_peak2-23136-15-23--0.5727977501655-0.575340103425218	chr14	101839187	101840200	+	0	NA	Intergenic	B3|SINE|B2	168715	NM_001081278	210789	Mm.320639	NM_173380	ENSMUSG00000033083	Tbc1d4	5930406J04Rik|A930035N22|AV295684|As160	TBC1 domain family, member 4	protein-coding
common_peak1-11602-10-6-0.549060422951165-1.21398586181642	chr16	17733325	17733822	+	0	NA	Intergenic	RMER5|LTR|ERV1	-10533	NM_001040683	94112	Mm.208970	NM_033609	ENSMUSG00000012114	Med15	A230074L19Rik|AW536074|Pcqap|mPcqap	mediator complex subunit 15	protein-coding
unique_peak2-38592-3-6--1.22133801201688-1.08602067057793	chr7	73606458	73606894	+	0	NA	Intergenic	MTD-int|LTR|MaLR	-34313	NM_053080	56847	Mm.140988	NM_053080	ENSMUSG00000015134	Aldh1a3	ALDH6|RALDH3|V1	aldehyde dehydrogenase family 1, subfamily A3	protein-coding
unique_peak2-36804-7-10--0.660340788339108-1.12966497611638	chr3	84155203	84155754	+	0	NA	intron (NR_040752, intron 3 of 3)	intron (NR_040752, intron 3 of 3)	28365	NR_040752	75309	Mm.159497	NR_040752		4930565D16Rik	-	RIKEN cDNA 4930565D16 gene	ncRNA
common_peak1-9187-43-32-0.738169066165249-1.63721186903096	chr11	79214091	79215278	+	0	NA	intron (NM_010897, intron 5 of 57)	MERVL_2A-int|LTR|ERVL	61290	NM_010897	18015	Mm.255596	NM_010897	ENSMUSG00000020716	Nf1	AW494271|E030030H24Rik|Nf-1	neurofibromatosis 1	protein-coding
common_peak2-26306-20-14-0.581184188982674-0.690311289528838	chr2	32452204	32452725	+	0	NA	intron (NM_011373, intron 4 of 4)	intron (NM_011373, intron 4 of 4)	-2765	NM_001025311	50935	Mm.88831	NM_016973	ENSMUSG00000026811	St6galnac6	ST6GalNAcVI|Siat7f	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6	protein-coding
unique_peak2-39765-8-10--0.454209200689727-1.078512453669	chrX	6400517	6401133	+	0	NA	intron (NM_177914, intron 1 of 27)	intron (NM_177914, intron 1 of 27)	44393	NM_177914	331374	Mm.392752	NM_177914	ENSMUSG00000062393	Dgkk	Gm360	diacylglycerol kinase kappa	protein-coding
common_peak2-24266-10-8-0.186490343566457-1.078512453669	chr16	94316606	94317105	+	0	NA	intron (NM_011377, intron 7 of 10)	intron (NM_011377, intron 7 of 10)	192608	NM_139145	110948	Mm.30921	NM_139145	ENSMUSG00000040820	Hlcs	410I21.SP6|D16Jhu34	holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase)	protein-coding
unique_peak1-7191-13-7-0.778472030637769-0.817533494790411	chr9	63746423	63747007	+	0	NA	Intergenic	Intergenic	123151	NM_008542	17130	Mm.325757	NM_008542	ENSMUSG00000036867	Smad6	Madh6|b2b390Clo	SMAD family member 6	protein-coding
unique_peak2-34980-5-27--2.51173525806346-3.91086220464714	chr15	98952886	98953800	+	0	NA	Intergenic	Intergenic	-3933	NM_139140	72572	Mm.276650	NM_139140	ENSMUSG00000051934	Spats2	2700012F11Rik|59kDa|Scr59|p59	spermatogenesis associated, serine-rich 2	protein-coding
common_peak1-10597-45-22-1.33679606928786-3.94835329416591	chr14	31403482	31405377	+	0	NA	Intergenic	Intergenic	19094	NR_037237	100526475		NR_037237		Mir3076	mmu-mir-3076	microRNA 3076	ncRNA
common_peak1-18951-7-8--0.370834171144123-1.00793137938329	chr9	50659436	50659929	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-5347	NM_001034085	73699	Mm.7726	NM_028614	ENSMUSG00000032058	Ppp2r1b	2410091N08Rik|AI790395	protein phosphatase 2, regulatory subunit A, beta	protein-coding
common_peak2-21759-5-18--1.95230784944944-1.99473478107052	chr11	116087251	116087737	+	0	NA	intron (NM_025276, intron 18 of 21)	intron (NM_025276, intron 18 of 21)	10178	NR_004853	69681	Mm.33677	NR_004853	ENSMUSG00000092300	Cdk3-ps	2310050O10Rik|Cdk3	cyclin-dependent kinase 3, pseudogene	pseudo
common_peak1-16016-42-34-0.613046310922218-1.29674067475645	chr5	35574320	35575880	+	0	NA	Intergenic	LTR16D2|LTR|ERVL	-46115	NM_007418	11553	Mm.57205	NM_007418	ENSMUSG00000045318	Adra2c	Adra-2c|[a]2C|alpha2-C4|alpha2C	adrenergic receptor, alpha 2c	protein-coding
common_peak1-12176-20-21-0.0286431659538957-0.306080386793804	chr17	31296156	31297089	+	0	NA	intron (NR_110502, intron 4 of 5).2	MTE2b|LTR|MaLR	5376	NM_009362	21784	Mm.2854	NM_009362	ENSMUSG00000024032	Tff1	Bcei|PS2	trefoil factor 1	protein-coding
common_peak1-13397-87-143--0.174287895661143-0.481410466069897	chr19	47313795	47315857	+	0	NA	intron (NM_021360, intron 2 of 5)	intron (NM_021360, intron 2 of 5)	11493	NM_001163480	18011	Mm.313651	NM_021360	ENSMUSG00000006435	Neurl1a	2410129E16Rik|AI450910|AI481072|Neu1|Neur1|Neurl|Neurl1|Nlz|Rnf67	neuralized homolog 1A (Drosophila)	protein-coding
unique_peak2-36594-1-6--2.43441193227435-1.56314192529759	chr2	176486398	176486696	+	0	NA	intron (NR_040256, intron 2 of 4)	B2_Mm2|SINE|B2	-6515	NM_001100416	668030	Mm.289463	NM_001100416		Gm14432	OTTMUSG00000016609	predicted gene 14432	protein-coding
common_peak2-24913-12-19--0.673152109799724-0.546772548767014	chr17	85089597	85090533	+	0	NA	intron (NM_026180, intron 3 of 12)	B1_Mur2|SINE|Alu	7604	NM_026180	67470	Mm.26581	NM_026180	ENSMUSG00000024254	Abcg8	1300003C16Rik|AI114946|sterolin-2	ATP-binding cassette, sub-family G (WHITE), member 8	protein-coding
common_peak2-23099-17-12-0.517856620063946-0.647240723060192	chr14	76819211	76819800	+	0	NA	intron (NM_207652, intron 1 of 2)	intron (NM_207652, intron 1 of 2)	3877	NM_207652	21807	Mm.153272	NM_009366	ENSMUSG00000022010	Tsc22d1	AA589566|AW105905|Egr5|TSC-22|Tgfb1i4|Tsc|Tsc22	TSC22 domain family, member 1	protein-coding
common_peak1-11321-10-4-1.03448725012141-1.5150158574804	chr15	85613101	85613660	+	0	NA	intron (NM_011144, intron 3 of 7)	L1MEc|LINE|L1	28747	NM_001164626	72355	Mm.33706	NM_197998	ENSMUSG00000064284	Cdpf1	2210021J22Rik	cysteine rich, DPF motif domain containing 1	protein-coding
unique_peak1-6705-21-6-1.76213434320863-2.81226952737395	chr8	34530093	34531159	+	0	NA	Intergenic	Intergenic	33829	NM_001098233	75029	Mm.159402	NM_152821	ENSMUSG00000049184	Purg	4930486B15Rik	purine-rich element binding protein G	protein-coding
unique_peak1-6911-25-6-2.0544949832875-3.87314773301527	chr8	105854494	105855353	+	0	NA	Intergenic	Intergenic	16511	NR_036588	69794	Mm.396139	NR_036588		1600027J07Rik	-	RIKEN cDNA 1600027J07 gene	ncRNA
unique_peak1-7408-40-5-3.07401318202994-9.84110924317454	chrX	126774803	126775582	+	0	NA	intron (NM_172493, intron 23 of 26)	intron (NM_172493, intron 23 of 26)	490914	NM_172493	54004	Mm.10763	NM_017398	ENSMUSG00000034480	Diap2	Dia3|Diaph2|Drf2|E430022I22Rik	diaphanous homolog 2 (Drosophila)	protein-coding
unique_peak2-33967-6-7--0.434601889619698-0.97990265578305	chr12	81594723	81594988	+	0	NA	intron (NM_133798, intron 8 of 8)	B2_Mm2|SINE|B2	-13338	NR_045490	69522	Mm.390530	NR_045490		2310002D06Rik	-	RIKEN cDNA 2310002D06 gene	ncRNA
common_peak2-27366-5-4--0.0263084308932156-0.909929411522249	chr3	84278894	84279277	+	0	NA	intron (NM_001033301, intron 1 of 11)	intron (NM_001033301, intron 1 of 11)	4328	NM_001205355	229474	Mm.331107	NM_001033301		Fhdc1	6330505N24Rik|Gm126	FH2 domain containing 1	protein-coding
unique_peak2-34796-1-9--2.94898510510411-2.31132995230379	chr15	71701998	71702508	+	0	NA	exon (NM_027174, exon 41 of 64)	exon (NM_027174, exon 41 of 64)	-143985	NM_177819	70363	Mm.126450	NM_177819	ENSMUSG00000036800	Fam135b	1700010C24Rik|A830008O07Rik	family with sequence similarity 135, member B	protein-coding
common_peak1-9504-40-26-0.90408818058763-2.09593985174544	chr11	113291440	113293088	+	0	NA	intron (NM_027216, intron 5 of 9)	intron (NM_027216, intron 5 of 9)	134865	NM_001166503	69806	Mm.341021	NM_027216	ENSMUSG00000041654	Slc39a11	1810074D23Rik	solute carrier family 39 (metal ion transporter), member 11	protein-coding
common_peak2-23253-19-33--0.684775514588653-0.884951936461256	chr15	12306136	12307176	+	0	NA	intron (NM_001081064, intron 18 of 23)	intron (NM_001081064, intron 18 of 23)	55405	NM_025673	66629	Mm.157655	NM_025673	ENSMUSG00000022200	Golph3	4733401N08Rik|5730410D03Rik|AW413496	golgi phosphoprotein 3	protein-coding
unique_peak2-39824-3-5--0.998945590680433-0.96108193396963	chrX	42059721	42060118	+	0	NA	Intergenic	Lx4B|LINE|L1	83419	NM_001190718	245404	Mm.55685	NM_178739	ENSMUSG00000045284	Dcaf12l1	9330180J20|A230038L21Rik|Decaf12l1|Wdr40b	DDB1 and CUL4 associated factor 12-like 1	protein-coding
common_peak1-13230-201-201-0.791634212316462-9.16024970329863	chr19	28009952	28012705	+	0	NA	intron (NM_001166414, intron 1 of 17)	L1ME2|LINE|L1	46110	NM_001166414	19726	Mm.313321	NM_011265	ENSMUSG00000040929	Rfx3	C230093O12Rik|MRFX3	regulatory factor X, 3 (influences HLA class II expression)	protein-coding
common_peak1-18245-20-33--0.599388056659146-0.781990829058356	chr8	33385551	33386415	+	0	NA	Intergenic	Intergenic	123616	NR_046039	666589	Mm.367675	NR_046039		Gm8179	EG666589	predicted gene 8179	ncRNA
unique_peak2-36412-10-21--1.10301627362853-1.16735254179725	chr2	127269622	127270699	+	0	NA	5' UTR (NM_029629, exon 1 of 8)	5' UTR (NM_029629, exon 1 of 8)	141	NM_029629	68126	Mm.288676	NM_029629	ENSMUSG00000027371	Fahd2a	1500003K14Rik|B430104H02Rik|Cgi-105|Fahd2	fumarylacetoacetate hydrolase domain containing 2A	protein-coding
unique_peak2-33162-10-16--0.73104749624157-0.604422558181019	chr10	93325075	93325743	+	0	NA	intron (NM_019648, intron 10 of 11)	intron (NM_019648, intron 10 of 11)	28538	NM_019648	56307	Mm.289329	NM_019648	ENSMUSG00000036112	Metap2	4930584B20Rik|A930035J23Rik|AI047573|AL024412|AU014659|Amp2|Mnpep|p67|p67eIF2	methionine aminopeptidase 2	protein-coding
common_peak1-17645-12-10-0.189344366450341-0.386243247519795	chr7	51914278	51914867	+	0	NA	intron (NM_001271538, intron 2 of 40)	MIRc|SINE|MIR	6301	NM_001271538	71960	Mm.158289	NM_028021	ENSMUSG00000030739	Myh14	2400004E04Rik|II-C|NHMCII|NMHC II-C	myosin, heavy polypeptide 14	protein-coding
common_peak1-10643-10-14--0.550475250599749-0.446472590016315	chr14	46831674	46832162	+	0	NA	Intergenic	L1Md_A|LINE|L1	128216	NR_002875	218963	Mm.282093	NR_002875		Gm1821	-	ubiquitin pseudogene	pseudo
unique_peak1-169-10-0-3.35641534500877-3.31132995230379	chr1	74051033	74051630	+	0	NA	intron (NM_001289895, intron 4 of 32)	intron (NM_001289895, intron 4 of 32)	119690	NM_027884	21961	Mm.309975	NM_027884	ENSMUSG00000055322	Tns1	1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns	tensin 1	protein-coding
common_peak1-7889-35-40-0.0738182538444203-0.324581211600972	chr1	134560051	134561291	+	0	NA	intron (NM_182716, intron 2 of 29)	ORR1A4-int|LTR|MaLR	-21236	NM_001160316	269116	Mm.326702	NM_182716	ENSMUSG00000026442	Nfasc	AA387016|D430023G06Rik|NF|mKIAA0756	neurofascin	protein-coding
common_peak2-24744-11-14--0.398197011356905-0.379391706698377	chr17	48738944	48739603	+	0	NA	Intergenic	Intergenic	145047	NM_152823	76589	Mm.311629	NM_152823	ENSMUSG00000043592	Unc5cl	2510009H09Rik|BB155270|Zud	unc-5 homolog C (C. elegans)-like	protein-coding
unique_peak2-35730-7-7--0.200909169701811-0.97990265578305	chr18	35134507	35134938	+	0	NA	Intergenic	Intergenic	-20717	NM_010481	15526	Mm.209419	NM_010481	ENSMUSG00000024359	Hspa9	74kDa|Csa|Grp75|Hsc74|Hsp74|Hsp74a|Hspa9a|Mortalin|Mot-2|Mot2|Mthsp70|Pbp74	heat shock protein 9	protein-coding
common_peak2-23401-16-14-0.211373046659543-0.364171515310935	chr15	59151097	59151844	+	0	NA	intron (NM_009270, intron 2 of 10)	intron (NM_009270, intron 2 of 10)	4823	NM_009270	20775	Mm.296169	NM_009270	ENSMUSG00000022351	Sqle	AI323792	squalene epoxidase	protein-coding
unique_peak1-2061-8-1-2.00522241794757-2.05605744720049	chr15	31115729	31116072	+	0	NA	Intergenic	Intergenic	-38240	NM_146057	223453	Mm.222867	NM_146057	ENSMUSG00000039168	Dap	4921531N22Rik|AI789753|AU040360	death-associated protein	protein-coding
unique_peak1-6579-7-6--0.00826409175941478-0.97990265578305	chr7	141432747	141433234	+	0	NA	Intergenic	Intergenic	-16210	NM_007400	11489	Mm.439714	NM_007400	ENSMUSG00000054555	Adam12	Mltna|mKIAA4001	a disintegrin and metallopeptidase domain 12 (meltrin alpha)	protein-coding
common_peak2-21076-43-41-0.390245762744942-0.745957255300192	chr11	50131319	50132050	+	0	NA	intron (NM_001110500, intron 1 of 14)	intron (NM_001110500, intron 1 of 14)	7491	NM_001110499	12330	Mm.248827	NM_007597	ENSMUSG00000020368	Canx	1110069N15Rik|AI988026|Cnx|D11Ertd153e	calnexin	protein-coding
common_peak1-8480-52-72--0.0815645686143185-0.314891503798722	chr10	80561113	80562187	+	0	NA	promoter-TSS (NM_145365)	promoter-TSS (NM_145365)	-33	NM_145365	208677	Mm.294693	NM_145365	ENSMUSG00000035041	Creb3l3	BC010786|CREB-H|D10Bur1e	cAMP responsive element binding protein 3-like 3	protein-coding
unique_peak2-39017-13-28--1.0795089644898-1.33403699391683	chr8	57486691	57487793	+	0	NA	Intergenic	Intergenic	898519	NM_175939	244486	Mm.67684	NM_175939	ENSMUSG00000046258	Adam29	-	a disintegrin and metallopeptidase domain 29	protein-coding
unique_peak2-39292-3-4--0.73591118484664-0.864171920961574	chr8	123253240	123253568	+	0	NA	Intergenic	Intergenic	-6872	NM_008320	15900	Mm.334861	NM_008320	ENSMUSG00000041515	Irf8	AI893568|ICSBP|IRF-8|Icsbp1|Myls	interferon regulatory factor 8	protein-coding
unique_peak2-34525-8-6-0.197867495889966-1.03789460276074	chr14	54360837	54361251	+	0	NA	Intergenic	Intergenic	75429	NM_001205242	100568452	Mm.213248	NM_001205242		A430107P09Rik	Va10	RIKEN cDNA A430107P09 gene	protein-coding
unique_peak1-6877-8-3-1.00522241794757-1.39487600375387	chr8	91380575	91381063	+	0	NA	Intergenic	Intergenic	159892	NM_001128171	74256	Mm.490395	NM_173369	ENSMUSG00000036712	Cyld	2010013M14Rik|2900009M21Rik|C130039D01Rik|CDMT|CYLD1|EAC|mKIAA0849	cylindromatosis (turban tumor syndrome)	protein-coding
unique_peak1-3040-9-2-1.60465090568306-1.87199725847353	chr18	5178947	5179474	+	0	NA	Intergenic	CT-rich|Low_complexity|Low_complexity	132623	NM_153153	225115	Mm.136791	NM_153153	ENSMUSG00000024236	Svil	AU024053|B430302E16Rik	supervillin	protein-coding
common_peak2-21135-15-14-0.105274154947137-0.330004445983672	chr11	54522900	54523422	+	0	NA	Intergenic	Intergenic	78044	NM_178626	72729	Mm.29476	NM_178626	ENSMUSG00000052298	Cdc42se2	2810404F18Rik|AA408783|AA536669|SPEC2	CDC42 small effector 2	protein-coding
common_peak1-10353-27-51--0.708893767245856-1.25391625579201	chr13	81783113	81784052	+	0	NA	Intergenic	Intergenic	-11439	NM_054053	110789	Mm.288694	NM_054053	ENSMUSG00000069170	Gpr98	Frings|Mass1|Mgr1|VLGR1	G protein-coupled receptor 98	protein-coding
common_peak2-32243-9-9--0.132314688483142-1.03275496310833	chrX	10715017	10715516	+	0	NA	Intergenic	Intergenic	-161117	NM_001111037	100042922	Mm.374311	NM_001111037	ENSMUSG00000095208	Gm14483	OTTMUSG00000016789	predicted gene 14483	protein-coding
common_peak1-8373-11-17--0.661231417190699-0.58239619684445	chr10	60932796	60933358	+	0	NA	Intergenic	Intergenic	-5504	NM_153542	216011	Mm.136116	NM_153542	ENSMUSG00000037151	Lrrc20	BC036304	leucine rich repeat containing 20	protein-coding
common_peak2-22923-12-7-0.648775985087639-0.697979855752659	chr14	46634067	46634649	+	0	NA	Intergenic	Intergenic	-69344	NR_002875	218963	Mm.282093	NR_002875		Gm1821	-	ubiquitin pseudogene	pseudo
common_peak2-28813-57-69-0.136750023133962-0.396265517229168	chr5	65390532	65391458	+	0	NA	intron (NM_026667, intron 3 of 13)	MT2A|LTR|ERVL	29438	NR_030577	100124451		NR_030577	miRBase:MI0005518	Mir574	Mirn574|mmu-mir-574	microRNA 574	ncRNA
common_peak1-14106-47-58-0.0521983754047062-0.317454636273721	chr2	126932633	126933905	+	0	NA	intron (NM_144818, intron 14 of 17)	intron (NM_144818, intron 14 of 17)	26421	NM_144818	215387	Mm.29786	NM_144818	ENSMUSG00000034906	Ncaph	A730011O11Rik|Brrn1|HCAP-H|mKIAA0074	non-SMC condensin I complex, subunit H	protein-coding
common_peak1-11833-98-138-0.0828276207070431-0.362755788825653	chr16	84834288	84836148	+	0	NA	promoter-TSS (NM_008065)	promoter-TSS (NM_008065)	-151	NM_008065	14390	Mm.18974	NM_008065	ENSMUSG00000008976	Gabpa	GABPalpha	GA repeat binding protein, alpha	protein-coding
unique_peak1-5219-8-5-0.420259917226415-1.10484139239135	chr5	36719392	36719913	+	0	NA	intron (NM_030889, intron 1 of 26)	intron (NM_030889, intron 1 of 26)	21136	NM_030889	81840	Mm.34113	NM_030889	ENSMUSG00000029093	Sorcs2	N28137|mKIAA1329	sortilin-related VPS10 domain containing receptor 2	protein-coding
common_peak2-27227-13-8-0.608547029195456-0.660903317613904	chr3	51660006	51660592	+	0	NA	exon (NM_001004176, exon 2 of 5)	exon (NM_001004176, exon 2 of 5)	195184	NM_174995	211666	Mm.24679	NM_174995	ENSMUSG00000074604	Mgst2	GST2|MGST-II	microsomal glutathione S-transferase 2	protein-coding
unique_peak2-35227-9-15--0.81038659359578-0.630231561310125	chr16	92399351	92400231	+	0	NA	intron (NM_001081549, intron 1 of 3)	intron (NM_001081549, intron 1 of 3)	532	NM_019466	54720	Mm.265744	NM_019466	ENSMUSG00000022951	Rcan1	Adapt78|CALP1L|CSP1|DSC1|Dscr1|MCIP1|RCN1	regulator of calcineurin 1	protein-coding
unique_peak2-39186-7-11--0.785871670422967-1.21681515183528	chr8	95434383	95434930	+	0	NA	intron (NM_173014, intron 12 of 13)	intron (NM_173014, intron 12 of 13)	9362	NM_027112	69543	Mm.440514	NM_027112	ENSMUSG00000078144	Capns2	2310005G05Rik|30K-2	calpain, small subunit 2	protein-coding
unique_peak2-32580-5-10--1.16381195464315-1.33892459842472	chr1	88700484	88700953	+	0	NA	intron (NM_001172157, intron 6 of 21)	L1M2|LINE|L1	100339	NM_001172157	208718	Mm.389152	NM_153530	ENSMUSG00000053333	Dis3l2	4930429A22Rik|8030493P09Rik	DIS3 mitotic control homolog (S. cerevisiae)-like 2	protein-coding
common_peak1-14201-15-17--0.157760250886656-0.307611222530528	chr2	148184934	148185668	+	0	NA	Intergenic	IAPLTR2b|LTR|ERVK	-35812	NM_009219	20608	Mm.35324	NM_009219	ENSMUSG00000037014	Sstr4	Smstr4|sst4	somatostatin receptor 4	protein-coding
unique_peak1-929-9-1-2.18961340640422-2.31132995230379	chr11	52335755	52336188	+	0	NA	Intergenic	Intergenic	126041	NM_153117	213673	Mm.291979	NM_153117	ENSMUSG00000036275	9530068E07Rik	C85061|Kct2	RIKEN cDNA 9530068E07 gene	protein-coding
common_peak1-14113-85-56-1.12251323395991-6.02019676904989	chr2	127721994	127724866	+	0	NA	intron (NM_028765, intron 8 of 17)	intron (NM_028765, intron 8 of 17)	43066	NM_028765	74121	Mm.244835	NM_028765	ENSMUSG00000027380	Acoxl	1200014P05Rik|AV025673	acyl-Coenzyme A oxidase-like	protein-coding
common_peak2-20592-12-20--0.743541437691122-0.625923329873571	chr10	79554383	79555120	+	0	NA	intron (NM_183426, intron 1 of 31)	intron (NM_183426, intron 1 of 31)	10696	NM_183426	216161	Mm.262102	NM_183426	ENSMUSG00000035673	Sbno2	BC019206|F730040C21|Sno|Stno	strawberry notch homolog 2 (Drosophila)	protein-coding
unique_peak1-7168-17-6-1.41094141614743-1.84350559086818	chr9	60521380	60522309	+	0	NA	intron (NM_145616, intron 6 of 16)	intron (NM_145616, intron 6 of 16)	13497	NM_001146047	102747	Mm.269413	NM_145616	ENSMUSG00000047766	Lrrc49	AI430817|AW050057|D430025H09Rik|PGs4|p79	leucine rich repeat containing 49	protein-coding
unique_peak1-4688-10-3-1.35641534500877-1.75805390616669	chr3	96068707	96069297	+	0	NA	Intergenic	Intergenic	-1762	NM_033596	97122	Mm.227295	NM_033596		Hist2h4	H4|X04652	histone cluster 2, H4	protein-coding
unique_peak2-38912-11-17--0.661231417190699-0.58239619684445	chr8	13889785	13890475	+	0	NA	intron (NM_025556, intron 1 of 3)	CpG	141	NM_025556	66423	Mm.29063	NM_025556	ENSMUSG00000031458	Coprs	1700029I03Rik|2410022L05Rik|AA409325|AI256813|C85432|Copr5	coordinator of PRMT5, differentiation stimulator	protein-coding
common_peak1-15221-16-18--0.129663871175524-0.307235046933848	chr4	141147911	141148553	+	0	NA	intron (NM_133754, intron 3 of 8)	intron (NM_133754, intron 3 of 8)	7607	NM_001163256	74202	Mm.490327	NM_133754	ENSMUSG00000006219	Fblim1	2410043F08Rik|Cal|Fblp1|Gt10|migfilin|migfilin(s)	filamin binding LIM protein 1	protein-coding
unique_peak2-39755-6-8--0.60452689106201-1.03789460276074	chrX	42139585	42140191	+	0	NA	3' UTR (NM_178739, exon 2 of 2)	3' UTR (NM_178739, exon 2 of 2)	3450	NM_001190718	245404	Mm.55685	NM_178739	ENSMUSG00000045284	Dcaf12l1	9330180J20|A230038L21Rik|Decaf12l1|Wdr40b	DDB1 and CUL4 associated factor 12-like 1	protein-coding
common_peak2-29037-7-8--0.370834171144123-1.00793137938329	chr5	114443648	114443998	+	0	NA	promoter-TSS (NM_198109)	promoter-TSS (NM_198109)	-57	NM_198109	231637	Mm.389682	NM_198109	ENSMUSG00000042121	Ssh1	AW551225|Gm1394|Gm1395|SSH-1|mSSH-1L	slingshot homolog 1 (Drosophila)	protein-coding
common_peak1-9595-7-8--0.370834171144123-1.00793137938329	chr11	119816829	119817343	+	0	NA	intron (NM_130862, intron 1 of 13)	intron (NM_130862, intron 1 of 13)	12680	NM_130862	108100	Mm.197534	NM_130862	ENSMUSG00000025372	Baiap2	IRSp53|R75030	brain-specific angiogenesis inhibitor 1-associated protein 2	protein-coding
unique_peak2-34053-3-10--1.87341470859657-1.75805390616669	chr12	117430495	117430962	+	0	NA	Intergenic	L1Md_F2|LINE|L1	70770	NM_146039	217935	Mm.31382	NM_146039	ENSMUSG00000042050	Wdr60	D430033N04Rik	WD repeat domain 60	protein-coding
common_peak2-24851-8-10--0.454209200689727-1.078512453669	chr17	75255379	75255919	+	0	NA	intron (NM_152817, intron 16 of 19)	intron (NM_152817, intron 16 of 19)	138559	NM_152817	74196	Mm.209503	NM_152817	ENSMUSG00000024078	Ttc27	2610511O17Rik	tetratricopeptide repeat domain 27	protein-coding
common_peak2-30788-9-5-0.604650905683064-1.21398586181642	chr7	126922493	126922915	+	0	NA	intron (NM_212442, intron 10 of 14)	L1Md_T|LINE|L1	14868	NM_027698	71151	Mm.274160	NM_027698	ENSMUSG00000030929	Eri2	4933424N09Rik|Exod1|mKIAA1504	exoribonuclease 2	protein-coding
common_peak1-16549-88-63-1.01541240917053-5.32948049624563	chr5	144220555	144223420	+	0	NA	Intergenic	MYSERV6-int|LTR|ERVK	-3374	NM_144915	231871	Mm.469963	NM_144915	ENSMUSG00000039206	Daglb	E330036I19Rik	diacylglycerol lipase, beta	protein-coding
common_peak1-13368-21-11-0.984526764545079-1.3750876294627	chr19	46056379	46057154	+	0	NA	intron (NM_198296, intron 1 of 25)	B3|SINE|B2	16212	NM_198296	71617	Mm.210949	NM_198296	ENSMUSG00000039901	9130011E15Rik	AI431055|AW050122	RIKEN cDNA 9130011E15 gene	protein-coding
common_peak2-28423-5-8--0.874305337448166-1.10484139239135	chr4	147941563	147941989	+	0	NA	intron (NM_016699, intron 11 of 24)	L1M|LINE|L1	9240	NM_016699	50912	Mm.266635	NM_016699	ENSMUSG00000017264	Exosc10	PM-Scl|PM/Scl-100|Pmscl2|RRP6|p2|p3|p4	exosome component 10	protein-coding
common_peak2-19909-43-47-0.197600684802547-0.437419278836636	chr1	119525668	119526791	+	0	NA	Intergenic	MTB_Mm|LTR|MaLR	681480	NM_011650	22099	Mm.426637	NM_011650	ENSMUSG00000026374	Tsn	2610034C24Rik|AU040286|C3PO|TB-RBP	translin	protein-coding
common_peak1-15624-7-11--0.785871670422967-1.21681515183528	chr4	133584083	133584635	+	0	NA	Intergenic	Intergenic	-9628	NM_145833	83557	Mm.302567	NM_145833	ENSMUSG00000050966	Lin28a	AL024421|ENSMUSG00000070700|Gm10299|Lin-28|Lin28|Tex17|lin-28A	lin-28 homolog A (C. elegans)	protein-coding
common_peak1-18748-9-9--0.132314688483142-1.03275496310833	chr8	125293252	125293763	+	0	NA	Intergenic	Intergenic	-5898	NM_144932	257633	Mm.334875	NM_144932	ENSMUSG00000015016	Acsf3	BB101783	acyl-CoA synthetase family member 3	protein-coding
common_peak1-9368-8-9--0.316705676939792-1.03275496310833	chr11	97799748	97800181	+	0	NA	intron (NM_028199, intron 8 of 13)	intron (NM_028199, intron 8 of 13)	47796	NM_028199	72324	Mm.39617	NM_028199	ENSMUSG00000017417	Plxdc1	2410003I07Rik|AI848450|Tem7	plexin domain containing 1	protein-coding
common_peak2-23922-9-10--0.269818212233077-1.05503135781948	chr16	10785193	10785565	+	0	NA	intron (NM_001271603, intron 1 of 1)	CpG	250	NM_009896	12703	Mm.130	NM_009896	ENSMUSG00000038037	Socs1	Cish1|Cish7|JAB|SOCS-1|SSI-1	suppressor of cytokine signaling 1	protein-coding
unique_peak1-3636-9-2-1.60465090568306-1.87199725847353	chr19	38012310	38012805	+	0	NA	intron (NM_001099634, intron 30 of 52)	intron (NM_001099634, intron 30 of 52)	105510	NM_001099634	226101	Mm.34674	NM_177035	ENSMUSG00000048612	Myof	2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3	myoferlin	protein-coding
common_peak2-22680-7-6--0.00826409175941478-0.97990265578305	chr13	98122255	98122606	+	0	NA	Intergenic	Intergenic	-82495	NR_110432	100039691	Mm.219358	NR_110430		Lincenc1	ENSMUSG00000078952|Gm11019|Gm2373|linc-Enc1	long intergenic non-coding RNA, embryonic stem cells expressed 1	ncRNA
common_peak1-11775-11-12--0.191746133889479-0.310474156842889	chr16	45158009	45158626	+	0	NA	promoter-TSS (NM_026402)	promoter-TSS (NM_026402)	469	NM_028756	74102	Mm.264984	NM_028756	ENSMUSG00000022664	Slc35a5	1010001J06Rik|AU021179|BB097433|D16Ertd450e|D730043G07Rik	solute carrier family 35, member A5	protein-coding
common_peak2-22550-42-59--0.164561267741335-0.34908710939424	chr13	59769888	59770784	+	0	NA	intron (NM_001035122, intron 1 of 9)	intron (NM_001035122, intron 1 of 9)	6809	NM_001035122	105348	Mm.171335	NM_027307	ENSMUSG00000021556	Golm1	2310001L02Rik|AW125446|D030064E01Rik|GP73|Golph2|PSEC0257	golgi membrane protein 1	protein-coding
common_peak1-17826-28-46--0.501629731856175-0.767679714496325	chr7	105743403	105744563	+	0	NA	intron (NM_172280, intron 17 of 19)	intron (NM_172280, intron 17 of 19)	61096	NM_172280	233545	Mm.387819	NM_172280	ENSMUSG00000035401	2210018M11Rik	2310016L09Rik|AU019521|AU019557|Emsy	RIKEN cDNA 2210018M11 gene	protein-coding
common_peak1-16355-34-23-0.79710602628011-1.52482195715361	chr5	121583369	121584799	+	0	NA	3' UTR (NM_001109992, exon 16 of 16)	3' UTR (NM_001109992, exon 16 of 16)	57322	NM_001109992	19247	Mm.8681	NM_011202	ENSMUSG00000043733	Ptpn11	2700084A17Rik|AW536184|PTP1D|PTP2C|SAP-2|SH-PTP2|SH-PTP3|SHP-2|Shp2|Syp	protein tyrosine phosphatase, non-receptor type 11	protein-coding
common_peak1-17401-36-18-1.23139357272417-2.89693331866911	chr7	4169519	4170747	+	0	NA	Intergenic	L1M4|LINE|L1	-19223	NM_001081239	232801	Mm.258061	NM_001081239	ENSMUSG00000070873	Lilra5	E030017K20|EG232801|Gm4878|Lilrc1	leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5	protein-coding
common_peak1-10557-19-14-0.495796731053168-0.607095980551316	chr14	20673614	20674287	+	0	NA	Intergenic	Intergenic	15803	NR_105025	52512	Mm.483998	NR_105025		D14Ertd670e	-	DNA segment, Chr 14, ERATO Doi 670, expressed	ncRNA
common_peak2-30177-32-49--0.364764170555064-0.548322060310103	chr7	44694678	44696445	+	0	NA	Intergenic	Intergenic	1824343	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak1-18984-55-72-0.0147953122726845-0.30697942122102	chr9	56994885	56996443	+	0	NA	promoter-TSS (NM_028347)	promoter-TSS (NM_028347)	-823	NM_028347	72774	Mm.35749	NM_028347	ENSMUSG00000032298	Neil1	2810450N13Rik|Nei1	nei endonuclease VIII-like 1 (E. coli)	protein-coding
common_peak1-12448-26-41--0.464418330620298-0.672592695851323	chr17	81064383	81065366	+	0	NA	intron (NM_001290345, intron 2 of 33)	intron (NM_001290345, intron 2 of 33)	62491	NM_001290345	225028	Mm.311948	NM_001081357	ENSMUSG00000024242	Map4k3	4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1	mitogen-activated protein kinase kinase kinase kinase 3	protein-coding
unique_peak2-34787-6-11--1.01956439034085-1.32595962126035	chr15	62202833	62203405	+	0	NA	Intergenic	Intergenic	-152113	NR_003523	67552	Mm.484027	NM_026230		H2afy3	4933432H23Rik	H2A histone family, member Y3	pseudo
common_peak2-30849-15-25--0.688274967585436-0.73354163167379	chr7	134670668	134671309	+	0	NA	promoter-TSS (NR_034045)	promoter-TSS (NR_034045)	-423	NR_034045	100217442	Mm.451113	NR_034045		Snora30	MBI-26	small nucleolar RNA, H/ACA box 30	snoRNA
common_peak2-22512-18-21--0.146512467408946-0.306326795069975	chr13	54468122	54469010	+	0	NA	Intergenic	Intergenic	-4147	NM_009946	12890	Mm.268902	NM_009946	ENSMUSG00000025867	Cplx2	921-L|AI413745|AW492120	complexin 2	protein-coding
common_peak2-31905-54-49-0.52922957185501-1.25617732716373	chr9	58554571	58555447	+	0	NA	intron (NM_028598, intron 2 of 5)	B1_Mus1|SINE|Alu	34357	NM_028598	73673	Mm.205196	NM_028598	ENSMUSG00000074269	Rec114	2410076I21Rik|4930527A11Rik	REC114 meiotic recombination protein	protein-coding
common_peak1-12576-26-17-0.75797409071615-1.09210977391291	chr18	11915745	11916941	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-81440	NM_022021	63955	Mm.40717	NM_022021	ENSMUSG00000040957	Cables1	Cables|ik3-1	CDK5 and Abl enzyme substrate 1	protein-coding
common_peak2-29772-11-7-0.508693584251613-1.21681515183528	chr6	87887972	87888318	+	0	NA	Intergenic	PB1D10|SINE|Alu	24175	NM_173737	232210	Mm.246241	NM_173737	ENSMUSG00000030060	Hmces	8430410A17Rik|C85376	5-hydroxymethylcytosine (hmC) binding, ES cell specific	protein-coding
unique_peak1-746-6-1-1.5653981103803-1.56314192529759	chr10	111670169	111670675	+	0	NA	Intergenic	Intergenic	-37757	NM_001025581	268345	Mm.336242	NM_001025581	ENSMUSG00000035681	Kcnc2	AW047325|B230117I07|KShIIIA|Kv3.2	potassium voltage gated channel, Shaw-related subfamily, member 2	protein-coding
unique_peak2-39140-10-10--0.103016273628528-0.301029995663987	chr8	85529084	85529718	+	0	NA	intron (NM_177378, intron 3 of 6)	B4A|SINE|B4	142146	NM_177378	330812	Mm.491438	NM_177378	ENSMUSG00000047747	Rnf150	A630007N06Rik|C030044C12Rik|Greul5|mKIAA1214	ring finger protein 150	protein-coding
common_peak1-18556-23-29--0.185123091099438-0.336580821310529	chr8	104395021	104395947	+	0	NA	Intergenic	RLTR10|LTR|ERVK	913527	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
common_peak1-12377-12-14--0.25811461052088-0.309074325783021	chr17	65884121	65884780	+	0	NA	intron (NM_001008973, intron 1 of 14)	intron (NM_001008973, intron 1 of 14)	5672	NM_001008973	381107	Mm.141275	NM_001008973	ENSMUSG00000045036	Tmem232	E130009J12Rik|Gm940|Tes13-L|Tes13-S	transmembrane protein 232	protein-coding
unique_peak1-4514-9-1-2.18961340640422-2.31132995230379	chr3	27151211	27151722	+	0	NA	Intergenic	Intergenic	-64533	NM_009425	22035	Mm.1062	NM_009425	ENSMUSG00000039304	Tnfsf10	A330042I21Rik|AI448571|APO-2L|Ly81|TL2|Trail	tumor necrosis factor (ligand) superfamily, member 10	protein-coding
common_peak1-15847-24-10-1.33377828413042-2.22881803703862	chr5	3301302	3302118	+	0	NA	Intergenic	Intergenic	-42602	NM_009873	12571	Mm.31672	NM_009873	ENSMUSG00000040274	Cdk6	5830411I20|AI504062|Crk2	cyclin-dependent kinase 6	protein-coding
common_peak1-19478-21-34--0.559793751678731-0.677299098039755	chrX	136741692	136742649	+	0	NA	Intergenic	Intergenic	-103317	NR_037208	100499512		NR_037208		Mir3475	mmu-mir-3475	microRNA 3475	ncRNA
common_peak1-8074-8-4-0.683294323060208-1.21878474469819	chr1	177983874	177984172	+	0	NA	intron (NM_176916, intron 4 of 9)	intron (NM_176916, intron 4 of 9)	133563	NM_001290692	226720	Mm.11282	NM_001290692		Becn2	Gm104	beclin 2	protein-coding
unique_peak2-32669-9-33--1.89784943484612-3.46696221776358	chr1	135818411	135819490	+	0	NA	promoter-TSS (NM_054077)	promoter-TSS (NM_054077)	-972	NM_054077	116847	Mm.214514	NM_054077	ENSMUSG00000041577	Prelp	7330409J17Rik|SLRR2A	proline arginine-rich end leucine-rich repeat	protein-coding
unique_peak2-34672-2-5--1.50241675698448-1.08602067057793	chr15	5496708	5496918	+	0	NA	intron (NR_045274, intron 2 of 4)	intron (NR_045274, intron 2 of 4)	50495	NR_045274	71432	Mm.291087	NR_045274		5430437J10Rik	-	RIKEN cDNA 5430437J10 gene	ncRNA
common_peak1-7882-43-24-1.13870699574898-3.01487716443559	chr1	134094660	134096522	+	0	NA	TTS (NR_029777)	TTS (NR_029777)	926	NR_029777	723818		NR_029777	miRBase:MI0000646	Mir135b	Mirn135b	microRNA 135b	ncRNA
unique_peak2-33074-4-5--0.608423014574403-0.909929411522249	chr10	79707342	79707735	+	0	NA	3' UTR (NM_023431, exon 14 of 14)	3' UTR (NM_023431, exon 14 of 14)	-4659	NM_029272	75406	Mm.28712	NM_029272	ENSMUSG00000020153	Ndufs7	1010001M04Rik	NADH dehydrogenase (ubiquinone) Fe-S protein 7	protein-coding
unique_peak1-931-9-6-0.382258484346616-1.11707584880836	chr11	52450816	52451316	+	0	NA	Intergenic	Intergenic	-127142	NM_177059	320027	Mm.44518	NM_177059		Fstl4	B230374F23Rik|SPIG1|mKIAA1061	follistatin-like 4	protein-coding
unique_peak2-33485-3-8--1.58390809140159-1.39487600375387	chr11	70193924	70194447	+	0	NA	Intergenic	Intergenic	-28652	NM_009660	11687	Mm.4584	NM_009660	ENSMUSG00000018924	Alox15	12-LO|12/15-LO|15-LOX|Alox12l|L-12LO	arachidonate 15-lipoxygenase	protein-coding
common_peak2-29536-6-6--0.241956811677302-0.947717972411649	chr6	38847604	38848026	+	0	NA	Intergenic	Intergenic	-21170	NM_011539	21391	Mm.4054	NM_011539	ENSMUSG00000029925	Tbxas1	CYP5|CYP5A1|THAS|TS|TXAS|TXS	thromboxane A synthase 1, platelet	protein-coding
common_peak2-23119-66-133--0.547605526031931-1.93246080941676	chr14	87415896	87417626	+	0	NA	intron (NM_019670, intron 5 of 27)	intron (NM_019670, intron 5 of 27)	124160	NM_019670	56419	Mm.440585	NM_019670	ENSMUSG00000022021	Diap3	4930417P13Rik|Dia2|Diaph3|Drf3|mDia2|mKIAA4117|p134MDia2	diaphanous homolog 3 (Drosophila)	protein-coding
unique_peak2-34012-7-7--0.200909169701811-0.97990265578305	chr12	103388709	103389196	+	0	NA	intron (NM_172152, intron 2 of 16)	intron (NM_172152, intron 2 of 16)	21323	NM_172152	238384	Mm.312448	NM_172152	ENSMUSG00000041771	Slc24a4	A930002M03Rik|AW492432|NCKX4	solute carrier family 24 (sodium/potassium/calcium exchanger), member 4	protein-coding
unique_peak1-2566-8-4-0.683294323060208-1.21878474469819	chr16	25428095	25428503	+	0	NA	Intergenic	Intergenic	141396	NM_175165	71338	Mm.126851	NM_175165	ENSMUSG00000048399	Tprg	5430420C16Rik|Tprg1	transformation related protein 63 regulated	protein-coding
common_peak2-30479-14-8-0.729291158915332-0.771068449301682	chr7	49759028	49759525	+	0	NA	Intergenic	Intergenic	-55826	NM_027702	71162	Mm.158598	NM_027702	ENSMUSG00000030463	4933421I07Rik	-	RIKEN cDNA 4933421I07 gene	protein-coding
common_peak2-23410-8-6-0.197867495889966-1.03789460276074	chr15	59512216	59512504	+	0	NA	Intergenic	Intergenic	32151	NM_144549	211770	Mm.40298	NM_144549	ENSMUSG00000032501	Trib1	A530090O15Rik|TRB-1|Trb1	tribbles homolog 1 (Drosophila)	protein-coding
common_peak1-8899-34-47--0.20289397371989-0.362058538051628	chr11	49712006	49713000	+	0	NA	Intergenic	Intergenic	-2834	NM_029004	74563	Mm.258798	NM_029004	ENSMUSG00000020374	Rasgef1c	9130006A14Rik	RasGEF domain family, member 1C	protein-coding
unique_peak1-5717-29-7-2.11229008061511-4.7258874491988	chr6	41527359	41528170	+	0	NA	Intergenic	MIR|SINE|MIR	-27717	NM_001146351	13848	Mm.271976	NM_007680	ENSMUSG00000029869	Ephb6	Cekl|Mep	Eph receptor B6	protein-coding
common_peak1-15562-13-21--0.680959587999529-0.607095980551316	chr4	125127379	125127997	+	0	NA	Intergenic	(ATGGTG)n|Simple_repeat|Simple_repeat	-40387	NM_001081097	14807	Mm.40896	NM_001081097	ENSMUSG00000001985	Grik3	9630027E11|GluK3|GluR7-3|Glur-7|Glur7	glutamate receptor, ionotropic, kainate 3	protein-coding
unique_peak2-33388-12-22--0.874785970969374-0.809260849721102	chr11	50024774	50025843	+	0	NA	promoter-TSS (NM_011018)	promoter-TSS (NM_011018)	-986	NM_011018	18412	Mm.40828	NM_011018	ENSMUSG00000015837	Sqstm1	A170|OSF-6|Osi|STAP|STONE14|p62	sequestosome 1	protein-coding
common_peak1-17517-11-20--0.883623838527147-0.876666802405043	chr7	28049524	28050154	+	0	NA	intron (NM_010950, intron 2 of 9)	intron (NM_010950, intron 2 of 9)	6059	NM_010950	18223	Mm.458153	NM_010950	ENSMUSG00000063160	Numbl	nbl	numb-like	protein-coding
unique_peak2-35221-0-4--3.16205902536157-1.10720996964787	chr16	91688906	91689336	+	0	NA	promoter-TSS (NR_040389)	promoter-TSS (NR_040389)	-22	NR_040389	100038392	Mm.440384	NR_040389	ENSMUSG00000085169	Gm10785	ENSMUSG00000074911	predicted gene 10785	ncRNA
unique_peak1-5109-11-3-1.50869358425161-1.95434855131066	chr4	155162433	155162934	+	0	NA	Intergenic	Intergenic	-2700	NM_001033394	320587	Mm.384382	NM_001033394	ENSMUSG00000073680	Tmem88b	A230069A22Rik	transmembrane protein 88B	protein-coding
unique_peak1-47-19-8-1.23276232521937-1.61268301619756	chr1	23271127	23271887	+	0	NA	Intergenic	Intergenic	-7601	NR_029533	387225		NR_029533	miRBase:MI0000144	Mir30a	Mirn30a|mmu-mir-30a	microRNA 30a	ncRNA
common_peak1-11566-53-89--0.350880083913746-0.74168542740463	chr16	13255905	13257277	+	0	NA	promoter-TSS (NM_001122667)	promoter-TSS (NM_001122667)	17	NM_001122667	239719	Mm.270643	NM_153588	ENSMUSG00000009569	Mkl2	ENSMUSG00000075401|Gt4-1|MRTF-B|Mrtfb|mKIAA1243	MKL/myocardin-like 2	protein-coding
unique_peak1-6745-7-3-0.799090830298189-1.23214870625617	chr8	46888377	46888884	+	0	NA	intron (NM_172752, intron 17 of 22)	intron (NM_172752, intron 17 of 22)	16021	NR_045739	319940	Mm.441720	NR_045739	ENSMUSG00000085440	Sorbs2os	D330022K07Rik	sorbin and SH3 domain containing 2, opposite strand	ncRNA
unique_peak2-36404-4-7--1.02346051385325-1.09384600808989	chr2	126152170	126152537	+	0	NA	intron (NM_001080944, intron 26 of 27)	intron (NM_001080944, intron 26 of 27)	164936	NM_001080944	241633	Mm.222235	NM_001080944	ENSMUSG00000060131	Atp8b4	A530043E15|Im	ATPase, class I, type 8B, member 4	protein-coding
common_peak2-26456-15-6-1.20480982849805-1.32521814697968	chr2	73023567	73024010	+	0	NA	intron (NM_025942, intron 4 of 10)	intron (NM_025942, intron 4 of 10)	28716	NM_030091	67059	Mm.22661	NM_025942	ENSMUSG00000027108	Ola1	2510025G09Rik|2810405J23Rik|2810409H07Rik|Gtpbp9|PTD004	Obg-like ATPase 1	protein-coding
common_peak1-15893-17-9-0.896368243317676-1.09394599973099	chr5	14039737	14040520	+	0	NA	intron (NM_011348, intron 1 of 16)	intron (NM_011348, intron 1 of 16)	14852	NM_011348	20349	Mm.134093	NM_011348	ENSMUSG00000063531	Sema3e	6430702L12|AA408817|Semah|mKIAA0331	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E	protein-coding
unique_peak2-34081-2-6--1.72480917832092-1.26211192963361	chr13	6191815	6192245	+	0	NA	Intergenic	Intergenic	331295	NM_011803	23849	Mm.275036	NM_011803	ENSMUSG00000000078	Klf6	AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9	Kruppel-like factor 6	protein-coding
common_peak1-13710-19-23--0.18227517405947-0.320777457303847	chr2	30716723	30717509	+	0	NA	intron (NM_009116, intron 1 of 3)	ID_B1|SINE|B4	16229	NM_009116	20204	Mm.1802	NM_009116	ENSMUSG00000039476	Prrx2	Prx2|S8	paired related homeobox 2	protein-coding
unique_peak2-38851-1-6--2.43441193227435-1.56314192529759	chr7	144426905	144427231	+	0	NA	intron (NR_045885, intron 1 of 3)	intron (NR_045885, intron 1 of 3)	702	NR_045885	100038555	Mm.444788	NR_045885		Gm10578	ENSMUSG00000073800	predicted gene 10578	ncRNA
unique_peak1-6752-7-3-0.799090830298189-1.23214870625617	chr8	51296610	51297082	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-156620	NR_046067	100039954	Mm.400419	NR_046067		Gm2516	-	predicted gene 2516	ncRNA
common_peak1-15670-37-40-0.168441066867735-0.392002726290462	chr4	136601776	136603006	+	0	NA	intron (NM_198248, intron 1 of 18)	MIR|SINE|MIR	2219	NM_198248	230848	Mm.31068	NM_198248	ENSMUSG00000060862	Zbtb40	BC059177|C230087D24|Gm571|mKIAA0478	zinc finger and BTB domain containing 40	protein-coding
unique_peak1-79-11-0-3.50869358425161-3.61235994796777	chr1	40167405	40167921	+	0	NA	intron (NM_010555, intron 3 of 8)	Lx8|LINE|L1	-24967	NR_037980	100047133	Mm.447052	NR_037980	ENSMUSG00000097899	Gm16894	-	predicted gene, 16894	ncRNA
unique_peak1-4082-10-0-3.35641534500877-3.31132995230379	chr2	71536302	71536865	+	0	NA	Intergenic	Intergenic	-20891	NR_037979	381371	Mm.330284	NM_201366	ENSMUSG00000064263	Gm1631	-	predicted gene 1631	ncRNA
unique_peak2-39028-12-45--1.87478597096937-4.35777281740386	chr8	61590310	61591472	+	0	NA	Intergenic	Intergenic	200339	NM_173411	234290	Mm.39244	NM_173411	ENSMUSG00000049946	BC030500	-	cDNA sequence BC030500	protein-coding
common_peak1-18347-55-77--0.0807823477095466-0.313973398029927	chr8	69583712	69585366	+	0	NA	Intergenic	Intergenic	200423	NM_001163564	234344	Mm.334561	NM_001163564	ENSMUSG00000014907	Naf1	Gm174	nuclear assembly factor 1 homolog (S. cerevisiae)	protein-coding
unique_peak2-36161-5-8--0.874305337448166-1.10484139239135	chr2	26902931	26903398	+	0	NA	Intergenic	RMER1C|Other|Other	-19646	NM_001177627	227659	Mm.41203	NM_172659	ENSMUSG00000036067	Slc2a6	A330096C23|F630103L12Rik|Glut6|Glut9	solute carrier family 2 (facilitated glucose transporter), member 6	protein-coding
common_peak1-11883-39-14-1.70887065131063-4.77286552781164	chr16	95814235	95815829	+	0	NA	Intergenic	Intergenic	-63060	NM_133659	13876	Mm.164531	NM_133659	ENSMUSG00000040732	Erg	D030036I24Rik	avian erythroblastosis virus E-26 (v-ets) oncogene related	protein-coding
unique_peak1-5153-16-1-3.11826364226806-4.46429741251234	chr5	21702541	21703227	+	0	NA	intron (NM_011261, intron 3 of 63)	intron (NM_011261, intron 3 of 63)	147639	NM_011261	19699	Mm.425236	NM_011261	ENSMUSG00000042453	Reln	reeler|rl	reelin	protein-coding
unique_peak2-39599-3-6--1.22133801201688-1.08602067057793	chr9	77776895	77777306	+	0	NA	intron (NM_134255, intron 1 of 7)	RCHARR1|DNA|MER1_type	11928	NM_134255	68801	Mm.430736	NM_134255	ENSMUSG00000032349	Elovl5	1110059L23Rik|AI747313|AU043003|HELO1	ELOVL family member 5, elongation of long chain fatty acids (yeast)	protein-coding
unique_peak2-37122-5-6--0.511735258063458-0.947717972411649	chr4	9663581	9663967	+	0	NA	Intergenic	Lx2B|LINE|L1	-33958	NR_030693	320152	Mm.159946	NR_030693		4930412C18Rik	5730591J02Rik	RIKEN cDNA 4930412C18 gene	ncRNA
unique_peak2-36550-9-20--1.20270401637454-1.23014042908325	chr2	166906029	166906671	+	0	NA	Intergenic	RSINE1|SINE|B4	15557	NR_028540	100217443		NR_028540		Snord12	MBII-99	small nucleolar RNA, C/D box 12	snoRNA
unique_peak2-38986-12-28--1.20920501003993-1.52081014994907	chr8	41373720	41374705	+	0	NA	Intergenic	Intergenic	-1905	NM_030610	80857	Mm.425526	NM_030610	ENSMUSG00000031603	Fgf20	-	fibroblast growth factor 20	protein-coding
common_peak2-30768-18-31--0.687080848771648-0.820293215674341	chr7	124459581	124460339	+	0	NA	Intergenic	MTE2a|LTR|MaLR	-64533	NM_175645	233781	Mm.461427	NM_175645	ENSMUSG00000030657	Xylt1	8030490L12	xylosyltransferase 1	protein-coding
unique_peak2-39260-2-5--1.50241675698448-1.08602067057793	chr8	119549858	119550246	+	0	NA	intron (NM_029686, intron 30 of 42)	B1_Mm|SINE|Alu	-32703	NM_026572	68133	Mm.258462	NM_026572	ENSMUSG00000034424	Gcsh	1100001L02Rik|5730591C18Rik	glycine cleavage system protein H (aminomethyl carrier)	protein-coding
common_peak1-9833-16-24--0.525592547506663-0.561823156887258	chr12	75827147	75827975	+	0	NA	Intergenic	(TA)n|Simple_repeat|Simple_repeat	429100	NM_198866	386753	Mm.341686	NM_198866	ENSMUSG00000029878	Dbpht2	Spot2	DNA binding protein with his-thr domain	protein-coding
common_peak2-21514-40-44-0.167122586421423-0.413133827688651	chr11	94327759	94328770	+	0	NA	intron (NM_001177890, intron 1 of 34)	intron (NM_001177890, intron 1 of 34)	7248	NM_001177888	12291	Mm.29585	NM_009783	ENSMUSG00000020866	Cacna1g	Cav3.1d|[a]1G|a1G|alpha-1G|mKIAA1123	calcium channel, voltage-dependent, T type, alpha 1G subunit	protein-coding
unique_peak1-4012-18-7-1.31291915122835-1.71830443967823	chr2	35993013	35993786	+	0	NA	intron (NM_026422, intron 1 of 6)	intron (NM_026422, intron 1 of 6)	-1175	NR_027515	67889	Mm.205937	NM_026434	ENSMUSG00000026889	Rbm18	2010004P11Rik|AU015530	RNA binding motif protein 18	protein-coding
common_peak2-27480-14-6-1.09186123830004-1.16633110333236	chr3	93537497	93537904	+	0	NA	Intergenic	RMER3D-int|LTR|ERVK	-57495	NM_148949	207213	Mm.425165	NM_148949	ENSMUSG00000094084	Tdpoz1	2cpoz56|Mapp2|Spopl1	TD and POZ domain containing 1	protein-coding
common_peak1-17281-27-21-0.532114332257938-0.800403172662453	chr6	135294944	135295864	+	0	NA	Intergenic	Intergenic	-17545	NM_010128	13730	Mm.182785	NM_010128	ENSMUSG00000030208	Emp1	I-8-09|TMP	epithelial membrane protein 1	protein-coding
unique_peak1-6955-9-1-2.18961340640422-2.31132995230379	chr8	111735669	111736181	+	0	NA	Intergenic	L1ME3A|LINE|L1	128883	NR_002928	384864	Mm.390083	NR_002928		Gm1943	-	WD repeat domain 70 pseudogene	pseudo
unique_peak1-7345-11-3-1.50869358425161-1.95434855131066	chrX	8222882	8223557	+	0	NA	Intergenic	Intergenic	44751	NM_001081565	631002	Mm.379565	NM_001081565	ENSMUSG00000079703	Ssxb8	-	synovial sarcoma, X member B, breakpoint 8	protein-coding
common_peak2-21012-11-10-0.0492619656143161-0.31137425193576	chr11	29514529	29515060	+	0	NA	Intergenic	Intergenic	-66754	NM_001033865	78294	Mm.180003	NM_024277	ENSMUSG00000020460	Rps27a	0610006J14Rik|Uba52|Ubb|Ubc	ribosomal protein S27A	protein-coding
common_peak2-32119-25-43--0.597581713292191-0.895935469411238	chr9	102834636	102835741	+	0	NA	Intergenic	Intergenic	-75631	NM_033314	24059	Mm.207106	NM_033314	ENSMUSG00000032548	Slco2a1	2310021C19Rik|Pgt|Slc21a2|mPgt	solute carrier organic anion transporter family, member 2a1	protein-coding
unique_peak1-1076-7-3-0.799090830298189-1.23214870625617	chr11	86605263	86605722	+	0	NA	intron (NM_026191, intron 8 of 17)	intron (NM_026191, intron 8 of 17)	15670	NM_026191	67487	Mm.260627	NM_026191	ENSMUSG00000018425	Dhx40	2410016C14Rik|ARG147|DDX40|PAD	DEAH (Asp-Glu-Ala-His) box polypeptide 40	protein-coding
common_peak2-27819-10-14--0.550475250599749-0.446472590016315	chr3	145618341	145619016	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	17682	NM_025555	66421	Mm.25137	NM_025555		2410004B18Rik	4930572C24Rik	RIKEN cDNA 2410004B18 gene	protein-coding
common_peak2-31544-10-5-0.771452844287613-1.33892459842472	chr8	111624200	111624642	+	0	NA	Intergenic	MLT1D|LTR|MaLR	163661	NR_037295	100526511		NR_037295		Mir3108	mmu-mir-3108	microRNA 3108	ncRNA
common_peak2-22218-23-32--0.322626614849373-0.436052471002795	chr12	112795818	112797083	+	0	NA	Intergenic	Intergenic	16163	NR_045295	100504687	Mm.26072	NR_045295	ENSMUSG00000096995	2810029C07Rik	AU017849	RIKEN cDNA 2810029C07 gene	ncRNA
unique_peak2-34586-6-9--0.75652998450706-1.11707584880836	chr14	69502689	69503231	+	0	NA	Intergenic	Intergenic	-144386	NM_009285	20855	Mm.20911	NM_009285	ENSMUSG00000014813	Stc1	Stc	stanniocalcin 1	protein-coding
common_peak2-30626-49-75--0.241643690418401-0.490255246984408	chr7	92873998	92875262	+	0	NA	Intergenic	RMER15-int|LTR|ERVL	28861	NM_001105185	244114	Mm.469907	NM_001105185	ENSMUSG00000051877	Vmn2r72	EG244114|Vmn2r72-ps	vomeronasal 2, receptor 72	protein-coding
unique_peak1-7427-12-4-1.32684789020028-2.04196296489515	chrX	164013767	164014440	+	0	NA	intron (NM_001290427, intron 5 of 17)	intron (NM_001290427, intron 5 of 17)	-193472	NM_026662	110639	Mm.272955	NM_026662	ENSMUSG00000025742	Prps2	2610101M19Rik|AA589463|AI464149|Prps-2	phosphoribosyl pyrophosphate synthetase 2	protein-coding
unique_peak2-35282-6-4-0.24347001549294-0.989110657569874	chr17	6016046	6016444	+	0	NA	intron (NM_001290698, intron 6 of 19)	intron (NM_001290698, intron 6 of 19)	8665	NM_001290698	20975	Mm.236068	NM_011523	ENSMUSG00000023805	Synj2	AI481647|SJ2|mKIAA0348	synaptojanin 2	protein-coding
unique_peak1-637-25-11-1.27688740462395-2.12469164491494	chr10	42088697	42089652	+	0	NA	intron (NM_145743, intron 7 of 12)	intron (NM_145743, intron 7 of 12)	-92626	NM_019740	56484	Mm.338613	NM_019740	ENSMUSG00000048756	Foxo3	1110048B16Rik|2010203A17Rik|C76856|FKHRL1|Fkhr2|Foxo3a	forkhead box O3	protein-coding
common_peak1-17860-17-13-0.410941416147434-0.546772548767014	chr7	113418443	113419222	+	0	NA	Intergenic	L1VL4|LINE|L1	49210	NR_030720	668128	Mm.484022	NR_030720		Gm8989	EG668128|Gm21911	very large inducible GTPase 1 pseudogene	pseudo
unique_peak2-34483-9-6-0.382258484346616-1.11707584880836	chr14	40948756	40949115	+	0	NA	Intergenic	L1Md_F2|LINE|L1	479984	NR_045936	73591	Mm.65499	NR_045936		1700109I08Rik	-	RIKEN cDNA 1700109I08 gene	ncRNA
common_peak2-24283-14-18--0.348711353085941-0.360333814299795	chr16	97921948	97922834	+	0	NA	Intergenic	Intergenic	62971	NM_023663	72388	Mm.35290	NM_023663	ENSMUSG00000005251	Ripk4	2310069J12Rik|AI552420|ANKK2|Ankrd3|DIk|PKK|RIP4	receptor-interacting serine-threonine kinase 4	protein-coding
common_peak1-14725-21-22-0.0459273092092225-0.319918318021793	chr3	83864330	83865369	+	0	NA	Intergenic	Intergenic	-20766	NM_172681	229473	Mm.28838	NM_172681	ENSMUSG00000033767	D930015E06Rik	Kiaa0922|mKIAA0922	RIKEN cDNA D930015E06 gene	protein-coding
unique_peak2-35755-1-6--2.43441193227435-1.56314192529759	chr18	38893623	38893951	+	0	NA	Intergenic	MT2C_Mm|LTR|ERVL	-132865	NM_011898	24066	Mm.42038	NM_011898	ENSMUSG00000024427	Spry4	A030006O18Rik|sprouty4	sprouty homolog 4 (Drosophila)	protein-coding
common_peak2-23790-42-73--0.467124037761766-0.920598702816666	chr15	99590054	99592207	+	0	NA	intron (NM_028015, intron 1 of 9)	B2_Mm1t|SINE|B2	11816	NM_028015	71949	Mm.390821	NM_028015		Cers5	2310081H14Rik|AU045339|AW544927|Lass5|Trh4	ceramide synthase 5	protein-coding
common_peak2-24658-9-10--0.269818212233077-1.05503135781948	chr17	35814619	35815129	+	0	NA	Intergenic	Intergenic	-4247	NM_010364	14885	Mm.10182	NM_010364	ENSMUSG00000001524	Gtf2h4	AW545633|BTF2 p52|TFIIH|p44|p52	general transcription factor II H, polypeptide 4	protein-coding
common_peak2-28799-15-9-0.690236655668294-0.732381977911291	chr5	64805024	64805459	+	0	NA	Intergenic	Intergenic	53940	NR_040681	69999	Mm.261413	NR_040681		1700027F09Rik	-	RIKEN cDNA 1700027F09 gene	ncRNA
common_peak1-11456-207-193-0.90115882393038-11.6551351275947	chr15	101328302	101333928	+	0	NA	Intergenic	Intergenic	-3132	NR_002872	574415	Mm.491077	NR_002872		Gm6042	EG574415|Kb32p	type II keratin Kb32P	pseudo
unique_peak2-34341-8-10--0.454209200689727-1.078512453669	chr13	98815637	98816129	+	0	NA	intron (NM_012026, intron 6 of 35)	intron (NM_012026, intron 6 of 35)	160237	NM_012026	110596	Mm.252718	NM_012026	ENSMUSG00000021662	Arhgef28	9230110L08Rik|AI323540|D13Bwg1089e|RIP2|Rgnef|RhoGEF|Rhoip2|p190RhoGEF	Rho guanine nucleotide exchange factor (GEF) 28	protein-coding
common_peak1-9988-88-146--0.184259935665832-0.529377573067446	chr13	48545723	48546933	+	0	NA	Intergenic	Intergenic	62451	NM_001164575	67911	Mm.251375	NM_026450	ENSMUSG00000050954	Zfp169	1700025J14Rik|4930429A13Rik|BE688704	zinc finger protein 169	protein-coding
common_peak2-27522-4-5--0.608423014574403-0.909929411522249	chr3	95694949	95695357	+	0	NA	intron (NM_153513, intron 1 of 4)	B1_Mm|SINE|Alu	700	NM_153513	229600	Mm.89556	NM_153513	ENSMUSG00000038543	BC028528	L259	cDNA sequence BC028528	protein-coding
common_peak2-23315-35-24-0.78751406868778-1.48724131519612	chr15	36820165	36820961	+	0	NA	Intergenic	Intergenic	-93879	NM_001253806	22631	Mm.3360	NM_011740	ENSMUSG00000022285	Ywhaz	1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	protein-coding
common_peak2-28672-12-11-0.0638134843664826-0.337263207250336	chr5	32034473	32035019	+	0	NA	intron (NM_181282, intron 3 of 11)	intron (NM_181282, intron 3 of 11)	34323	NM_181282	107976	Mm.482126	NM_144541	ENSMUSG00000052139	Bre	6030405P19Rik|AI429776|B830038C02Rik	brain and reproductive organ-expressed protein	protein-coding
common_peak1-17101-6-10--0.894033508256995-1.21398586181642	chr6	113418495	113419005	+	0	NA	intron (NM_001034029, intron 11 of 13)	intron (NM_001034029, intron 11 of 13)	-2699	NM_178942	171095	Mm.213397	NM_134159	ENSMUSG00000030281	Il17rc	1110025H02Rik|Gm19850|IL-17RC|IL17-RC|IL17-RL|Il17rl	interleukin 17 receptor C	protein-coding
unique_peak1-655-12-3-1.64877598508764-2.36932189928148	chr10	59628439	59629043	+	0	NA	Intergenic	RMER15-int|LTR|ERVL	39217	NR_105871	102465546		NR_105871		Mir6906	mmu-mir-6906	microRNA mir-6906	ncRNA
common_peak1-10264-25-23-0.27688740462395-0.451698068655807	chr13	55622237	55623111	+	0	NA	Intergenic	Intergenic	7225	NM_013739	27261	Mm.33910	NM_013739	ENSMUSG00000035711	Dok3	AI450713|Dokl	docking protein 3	protein-coding
common_peak1-12333-19-62--1.57459259683823-4.89792790686431	chr17	53478313	53479172	+	0	NA	Intergenic	(GAAA)n|Simple_repeat|Simple_repeat	123904	NM_172497	211482	Mm.60887	NM_172497	ENSMUSG00000023931	Efhb	4921525D22Rik	EF hand domain family, member B	protein-coding
common_peak1-10374-40-62--0.318304240748819-0.533919121953929	chr13	93303443	93304742	+	0	NA	Intergenic	Intergenic	-3327	NM_173392	218441	Mm.259585	NM_173392	ENSMUSG00000021706	Zfyve16	AI035632|B130024H06Rik|B130031L15|mKIAA0305	zinc finger, FYVE domain containing 16	protein-coding
unique_peak1-4352-14-5-1.31425365963649-1.4372489031793	chr2	155552720	155553295	+	0	NA	intron (NM_145537, intron 2 of 10)	B3|SINE|B2	2204	NM_145537	108687	Mm.273706	NM_145537	ENSMUSG00000038312	Edem2	9530090G24Rik|AI327354	ER degradation enhancer, mannosidase alpha-like 2	protein-coding
unique_peak1-1927-11-1-2.50869358425161-2.83420869758413	chr14	76622458	76622984	+	0	NA	Intergenic	Intergenic	112023	NM_013745	27275	Mm.21138	NM_013745	ENSMUSG00000022009	Nufip1	Nufip	nuclear fragile X mental retardation protein interacting protein 1	protein-coding
unique_peak2-34309-1-6--2.43441193227435-1.56314192529759	chr13	91202755	91203035	+	0	NA	intron (NM_025770, intron 3 of 7)	intron (NM_025770, intron 3 of 7)	140168	NM_024175	66475	Mm.306302	NM_024175		Rps23	2410044J15Rik	ribosomal protein S23	protein-coding
common_peak2-19595-15-36--1.19728861507329-2.01522565129858	chr1	23256174	23257261	+	0	NA	Intergenic	Intergenic	-22391	NR_029533	387225		NR_029533	miRBase:MI0000144	Mir30a	Mirn30a|mmu-mir-30a	microRNA 30a	ncRNA
common_peak2-26607-30-25-0.469235691350781-0.734130039933318	chr2	114200931	114201603	+	0	NA	Intergenic	Intergenic	-174099	NM_175466	228491	Mm.132523	NM_175466	ENSMUSG00000040321	Zfp770	6430601A21Rik|Znf770	zinc finger protein 770	protein-coding
common_peak1-8314-82-113-0.0603731301409933-0.334729014356514	chr10	41518902	41520263	+	0	NA	intron (NM_026643, intron 1 of 10)	RLTR6-int|LTR|ERV1	9887	NM_001243075	103268	Mm.338605	NM_026643	ENSMUSG00000019813	Cep57l1	2410017P07Rik|4930484D11Rik|AI607327|cep57R	centrosomal protein 57-like 1	protein-coding
unique_peak1-313-10-0-3.35641534500877-3.31132995230379	chr1	131084385	131084826	+	0	NA	Intergenic	B4|SINE|B4	-85276	NM_172485	210417	Mm.380518	NM_172485	ENSMUSG00000042581	Thsd7b	1700074E13Rik|B930082A18|D130067I03Rik	thrombospondin, type I, domain containing 7B	protein-coding
common_peak2-23493-20-24--0.155781405183531-0.319918318021793	chr15	75940757	75941641	+	0	NA	exon (NM_144848, exon 2 of 2)	exon (NM_144848, exon 2 of 2)	9426	NM_144848	223650	Mm.259929	NM_144848		Eppk1	6230424I18Rik|EPIPL|EPIPL1|EPPK	epiplakin 1	protein-coding
unique_peak1-5595-6-1-1.5653981103803-1.56314192529759	chr6	34684868	34685322	+	0	NA	intron (NM_145575, intron 1 of 11)	intron (NM_145575, intron 1 of 11)	25651	NM_145575	109624	Mm.308134	NM_145575	ENSMUSG00000029761	Cald1	4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik	caldesmon 1	protein-coding
common_peak1-13029-51-26-1.3200363234391-4.36422420509488	chr19	5474080	5475470	+	0	NA	promoter-TSS (NM_021474)	promoter-TSS (NM_021474)	40	NM_001164352	58859	Mm.276367	NM_021474	ENSMUSG00000024909	Efemp2	0610011K11Rik|Fbln4|MBP1	epidermal growth factor-containing fibulin-like extracellular matrix protein 2	protein-coding
common_peak2-24908-16-26--0.636623859895407-0.713114929964887	chr17	84510459	84511532	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	32995	NR_045458	74473	Mm.399575	NR_045458		4933433H22Rik	-	RIKEN cDNA 4933433H22 gene	ncRNA
common_peak1-18602-41-76--0.565637835846241-1.28400020807614	chr8	106892643	106894151	+	0	NA	intron (NM_153582, intron 1 of 3)	intron (NM_153582, intron 1 of 3)	26310	NM_153582	97487	Mm.29658	NM_153582	ENSMUSG00000096188	Cmtm4	Cklfsf4|D19397|ENSMUSG00000051554|Gm9853	CKLF-like MARVEL transmembrane domain containing 4	protein-coding
common_peak2-20958-9-11--0.395349094316936-0.344532117358383	chr11	17953266	17953917	+	0	NA	Intergenic	Intergenic	-99713	NM_026576	68145	Mm.178684	NM_026576	ENSMUSG00000016984	Etaa1	5730466H23Rik|AA672646	Ewing tumor-associated antigen 1	protein-coding
common_peak2-29596-9-5-0.604650905683064-1.21398586181642	chr6	50682927	50683334	+	0	NA	Intergenic	Intergenic	-42984	NR_045984	319981	Mm.131454	NR_045984		C530044C16Rik	-	RIKEN cDNA C530044C16 gene	ncRNA
unique_peak2-36909-7-28--2.05889016482938-3.23080944932561	chr3	97658269	97658991	+	0	NA	intron (NM_001289702, intron 1 of 45)	intron (NM_001289702, intron 1 of 45)	34000	NM_001289702	83679	Mm.129840	NM_031401	ENSMUSG00000038170	Pde4dip	4732458A06Rik|9430063L05Rik|C87016|D130016K21Rik|D3Bwg1078e|Usmg4|mKIAA0454	phosphodiesterase 4D interacting protein (myomegalin)	protein-coding
common_peak2-21991-51-70--0.0748232939021092-0.315296283155016	chr12	54709708	54710412	+	0	NA	intron (NM_013780, intron 3 of 11)	PB1|SINE|Alu	360396	NM_013780	27386	Mm.247044	NM_013780	ENSMUSG00000021010	Npas3	4930423H22Rik|bHLHe12	neuronal PAS domain protein 3	protein-coding
common_peak1-9992-11-28--1.34928741087596-1.9654245668484	chr13	53001896	53002434	+	0	NA	intron (NM_016709, intron 3 of 9)	intron (NM_016709, intron 3 of 9)	22881	NM_016709	11992	Mm.252034	NM_016709	ENSMUSG00000021460	Auh	C77140|W91705	AU RNA binding protein/enoyl-coenzyme A hydratase	protein-coding
common_peak2-29008-10-6-0.549060422951165-1.21398586181642	chr5	110447444	110447871	+	0	NA	Intergenic	IAPEY3-int|LTR|ERVK	22111	NM_145563	69504	Mm.441438	NM_145563	ENSMUSG00000066613	Zfp932	2310001H12Rik|Znf431	zinc finger protein 932	protein-coding
common_peak1-9641-18-27--0.494435770829252-0.528262014464654	chr12	55492006	55492643	+	0	NA	promoter-TSS (NR_033689)	promoter-TSS (NR_033689)	-19	NR_033689	665239	Mm.26856	NR_033689		Gm7550	EG665239|Gm666	predicted gene 7550	ncRNA
common_peak1-14068-7-9--0.522837264589173-1.05908390183068	chr2	120608735	120609131	+	0	NA	intron (NM_001024856, intron 7 of 15)	B2_Mm2|SINE|B2	-51680	NM_026891	68968	Mm.2289	NM_026891	ENSMUSG00000027284	Cdan1	1500015A01Rik|AI448026|AW492297|CDA-I|CDA1|CDAI	congenital dyserythropoietic anemia, type I (human)	protein-coding
unique_peak1-5151-15-8-0.842239749113344-0.891319708951327	chr5	17556498	17557176	+	0	NA	Intergenic	L1MB8|LINE|L1	88449	NM_001081143	242851	Mm.332230	NM_001081143	ENSMUSG00000028777	Gnat3	Ggust|Gtn	guanine nucleotide binding protein, alpha transducing 3	protein-coding
common_peak1-11034-23-12-1.02132778636799-1.44787515926925	chr15	41650788	41651668	+	0	NA	intron (NM_130885, intron 6 of 14)	intron (NM_130885, intron 6 of 14)	-11276	NM_001130164	170719	Mm.254267	NM_130885	ENSMUSG00000022307	Oxr1	2210416C20Rik|C7|C7B	oxidation resistance 1	protein-coding
common_peak1-9062-12-8-0.478850983645327-0.562038191119709	chr11	69039402	69039966	+	0	NA	exon (NM_008192, exon 12 of 19)	exon (NM_008192, exon 12 of 19)	10840	NM_008192	14919	Mm.291816	NM_008192	ENSMUSG00000020890	Gucy2e	GC-E|GC1|ROS-GC1	guanylate cyclase 2e	protein-coding
unique_peak2-32487-3-7--1.41398308995928-1.23214870625617	chr1	37696459	37696849	+	0	NA	intron (NM_028096, intron 2 of 9)	L1MEg|LINE|L1	80002	NM_028096	72097	Mm.142607	NM_028096	ENSMUSG00000026090	2010300C02Rik	-	RIKEN cDNA 2010300C02 gene	protein-coding
common_peak2-19955-48-37-0.722999637791229-1.78594796811656	chr1	132150409	132151695	+	0	NA	Intergenic	L1Md_F2|LINE|L1	168524	NM_007827	13137	Mm.436759	NM_007827	ENSMUSG00000026401	Daf2	AI323748|Cd55b|Daf|Daf-TM|TM-DAF	decay accelerating factor 2	protein-coding
common_peak2-31319-8-9--0.316705676939792-1.03275496310833	chr8	79610704	79611304	+	0	NA	intron (NM_001083906, intron 3 of 8)	intron (NM_001083906, intron 3 of 8)	184597	NM_001083906	110784	Mm.324393	NM_001083906	ENSMUSG00000031618	Nr3c2	MR|Mlr	nuclear receptor subfamily 3, group C, member 2	protein-coding
unique_peak2-38239-6-6--0.241956811677302-0.947717972411649	chr6	120148187	120148549	+	0	NA	intron (NM_016718, intron 2 of 3)	intron (NM_016718, intron 2 of 3)	96209	NM_198884	330406	Mm.321840	NM_198884	ENSMUSG00000041372	B4galnt3	AB114826|B4GalNAcT3|C330047A21	beta-1,4-N-acetyl-galactosaminyl transferase 3	protein-coding
common_peak2-32262-7-12--0.901348887842903-1.31827279259406	chrX	8892417	8892787	+	0	NA	Intergenic	Intergenic	31712	NM_029588	76383	Mm.440761	NM_029588	ENSMUSG00000096571	1700012L04Rik	H2al1	RIKEN cDNA 1700012L04 gene	protein-coding
unique_peak1-4868-7-0-2.79909083029819-2.40823996531185	chr4	11420346	11420806	+	0	NA	intron (NM_001081183, intron 1 of 24)	B2_Mm2|SINE|B2	7471	NM_001081183	66185	Mm.331487	NM_001081183	ENSMUSG00000040720	1110037F02Rik	4930422M05Rik|Kiaa1429|mKIAA1429	RIKEN cDNA 1110037F02 gene	protein-coding
common_peak2-20441-2-9--2.23938235115068-1.87199725847353	chr10	34418714	34419057	+	0	NA	Intergenic	Intergenic	215679	NM_010237	14302	Mm.332432	NM_010237	ENSMUSG00000019779	Frk	BSK|BSK/IYK|C85044|GTK|RAK	fyn-related kinase	protein-coding
unique_peak1-3112-19-4-2.08075923177432-3.05312482518673	chr18	32148054	32148647	+	0	NA	intron (NM_032394, intron 18 of 46)	intron (NM_032394, intron 18 of 46)	-39060	NM_001025381	574402	Mm.391108	NM_001025381	ENSMUSG00000052229	Gpr17	AI853548	G protein-coupled receptor 17	protein-coding
unique_peak2-39213-6-9--0.75652998450706-1.11707584880836	chr8	106646659	106647077	+	0	NA	intron (NM_009868, intron 2 of 11)	(GGGA)n|Simple_repeat|Simple_repeat	21343	NM_009868	12562	Mm.21767	NM_009868	ENSMUSG00000031871	Cdh5	7B4|AA408225|Cd144|VE-Cad|VECD|VEcad|Vec	cadherin 5	protein-coding
common_peak2-25414-18-8-1.14299414978604-1.45476480588849	chr19	53411616	53412089	+	0	NA	intron (NM_010847, intron 2 of 5)	Lx8|LINE|L1	6916	NM_001008543	17859	Mm.2154	NM_010847	ENSMUSG00000025025	Mxi1	ENSMUSG00000067085|Gm10197|Mad2|bHLHc11	Max interacting protein 1	protein-coding
unique_peak2-38516-0-4--3.16205902536157-1.10720996964787	chr7	45082351	45082767	+	0	NA	Intergenic	Intergenic	1437345	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak2-26173-92-139--0.0369309332422016-0.308136773605315	chr2	20967562	20969623	+	0	NA	Intergenic	Intergenic	78091	NR_033225	433408	Mm.386941	NR_033225		Gm13375	OTTMUSG00000011664	predicted gene 13375	ncRNA
common_peak2-23724-12-15--0.351224014912361-0.332077462497413	chr15	94543618	94544173	+	0	NA	intron (NM_178789, intron 2 of 7)	(CA)n|Simple_repeat|Simple_repeat	84279	NM_178789	320709	Mm.74873	NM_178789	ENSMUSG00000063296	Tmem117	B930062P21Rik	transmembrane protein 117	protein-coding
common_peak1-17502-11-10-0.0492619656143161-0.31137425193576	chr7	25433374	25433857	+	0	NA	Intergenic	Intergenic	12026	NM_133743	72434	Mm.281093	NM_133743	ENSMUSG00000057454	Lypd3	2310061G07Rik|C4.4a	Ly6/Plaur domain containing 3	protein-coding
common_peak1-10950-19-23--0.18227517405947-0.320777457303847	chr15	25621376	25622334	+	0	NA	intron (NM_019472, intron 2 of 40)	intron (NM_019472, intron 2 of 40)	69550	NM_019472	17909	Mm.60590	NM_019472	ENSMUSG00000022272	Myo10	AW048724|D15Ertd600e|mKIAA0799	myosin X	protein-coding
common_peak2-20971-10-14--0.550475250599749-0.446472590016315	chr11	20542162	20542706	+	0	NA	intron (NM_001038625, intron 1 of 1)	intron (NM_001038625, intron 1 of 1)	10454	NM_001038625	58172	Mm.339676	NM_021372	ENSMUSG00000049800	Sertad2	AB041541|AU021878|Kiaa0127|SEI-2|Sei2|TRIP-Br2|mKIAA0127	SERTA domain containing 2	protein-coding
unique_peak1-2182-15-9-0.690236655668294-0.732381977911291	chr15	62321646	62322441	+	0	NA	Intergenic	Intergenic	-271037	NR_003523	67552	Mm.484027	NM_026230		H2afy3	4933432H23Rik	H2A histone family, member Y3	pseudo
common_peak2-31254-20-34--0.641208232353773-0.863762398024911	chr8	70673334	70674175	+	0	NA	Intergenic	Intergenic	-126673	NM_028182	72281	Mm.40974	NM_028182	ENSMUSG00000053886	Sh2d4a	2210402M20Rik|SH2A	SH2 domain containing 4A	protein-coding
common_peak1-15134-26-16-0.840436250908123-1.24110690293937	chr3	142620253	142621154	+	0	NA	Intergenic	LTR16A|LTR|ERVL	-75735	NM_178654	109333	Mm.244236	NM_178654	ENSMUSG00000004591	Pkn2	6030436C20Rik|AI507382|PRK2|Prkcl2|Stk7	protein kinase N2	protein-coding
unique_peak2-32497-0-5--3.42509343119537-1.32905871926422	chr1	44825414	44825731	+	0	NA	intron (NM_028450, intron 6 of 10)	intron (NM_028450, intron 6 of 10)	-23778	NR_040602	75066	Mm.416932	NR_040602		4930521E06Rik	-	RIKEN cDNA 4930521E06 gene	ncRNA
unique_peak2-36441-8-6-0.197867495889966-1.03789460276074	chr2	132816020	132816592	+	0	NA	Intergenic	Intergenic	-44534	NM_198029	241639	Mm.209784	NM_198029	ENSMUSG00000027356	Fermt1	5830467P10Rik|Kindlin-1	fermitin family homolog 1 (Drosophila)	protein-coding
common_peak2-25183-17-8-1.04837133676273-1.30305656033811	chr18	56977712	56978098	+	0	NA	intron (NM_177115, intron 1 of 4)	intron (NM_177115, intron 1 of 4)	107297	NM_177115	320253	Mm.312623	NM_177115	ENSMUSG00000032656	March3	6330411I15Rik|A530081L18Rik|AI843639|MARCH-III	membrane-associated ring finger (C3HC4) 3	protein-coding
unique_peak1-1068-7-2-1.21412832957703-1.45399745587252	chr11	83624109	83624522	+	0	NA	Intergenic	Intergenic	-40056	NM_001291268	21410	Mm.7226	NM_009330	ENSMUSG00000020679	Hnf1b	HNF-1-beta|HNF-1B|HNF-1Beta|Hnf1beta|LFB3|Tcf-2|Tcf2|vHNF1	HNF1 homeobox B	protein-coding
unique_peak2-38928-5-11--1.28934283672701-1.477227296591	chr8	22756919	22757330	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-9115	NM_001167790	23855	Mm.425519	NM_001167790	ENSMUSG00000060208	Defa17	AU014719|Cryp17|Defcr17	defensin, alpha, 17	protein-coding
unique_peak2-35443-6-12--1.13504160776079-1.45089835786865	chr17	35479592	35480258	+	0	NA	intron (NM_010392, intron 2 of 6)	CpG-6321	647	NM_010392	15013	Mm.427969	NM_010392	ENSMUSG00000091705	H2-Q2	BE136769|ENSMUSG00000079507|Gm11132|H-2Q2|gs14-2	histocompatibility 2, Q region locus 2	protein-coding
common_peak2-28624-17-22--0.305265617851975-0.348739088570342	chr5	25498831	25499607	+	0	NA	Intergenic	Intergenic	233375	NM_001004365	242894	Mm.150319	NM_001004365	ENSMUSG00000056367	Actr3b	9630005C02|ARP11|AW047569|Arp3b|Arp3beta	ARP3 actin-related protein 3B	protein-coding
common_peak2-24719-19-20-0.0103699038829257-0.306326795069978	chr17	46782023	46783111	+	0	NA	promoter-TSS (NM_025302)	promoter-TSS (NM_025302)	-474	NM_029091	74764	Mm.279599	NM_029091	ENSMUSG00000003546	Klc4	1200014P03Rik|AA408085|AW146303|Knsl8	kinesin light chain 4	protein-coding
common_peak2-28238-33-40--0.026214442092555-0.301029995663988	chr4	122954681	122956056	+	0	NA	Intergenic	Intergenic	-4786	NM_130881	230721	Mm.277091	NM_130881	ENSMUSG00000011257	Pabpc4	-	poly(A) binding protein, cytoplasmic 4	protein-coding
common_peak1-10898-51-62-0.0976439021026563-0.343123337561527	chr15	101940657	101942284	+	0	NA	intron (NM_153533, intron 17 of 28)	intron (NM_153533, intron 17 of 28)	8051	NM_153533	209039	Mm.29389	NM_153533	ENSMUSG00000037003	Tenc1	C1-ten|nep|nph	tensin like C1 domain-containing phosphatase	protein-coding
unique_peak2-37177-4-8--1.19338551529556-1.21878474469819	chr4	48045161	48045622	+	0	NA	Intergenic	Intergenic	-18729	NM_015743	18124	Mm.247261	NM_015743	ENSMUSG00000028341	Nr4a3	AI573420|CHN|CSMF|MINOR|NOR-1|Nor1|TEC	nuclear receptor subfamily 4, group A, member 3	protein-coding
unique_peak1-2636-18-2-2.7279566505072-4.01305082679061	chr16	43801648	43802362	+	0	NA	intron (NM_007877, intron 2 of 6)	intron (NM_007877, intron 2 of 6)	39650	NM_007877	13490	Mm.439735	NM_007877	ENSMUSG00000022705	Drd3	D3R	dopamine receptor D3	protein-coding
unique_peak1-3729-10-4-1.03448725012141-1.5150158574804	chr19	46521036	46521563	+	0	NA	intron (NM_001025391, intron 3 of 11)	L1MB3|LINE|L1	49913	NM_015752	24069	Mm.41210	NM_015752	ENSMUSG00000025231	Sufu	Su(fu)	suppressor of fused homolog (Drosophila)	protein-coding
common_peak1-18776-24-38--0.492192316094532-0.631311512744354	chr8	126945172	126946102	+	0	NA	intron (NM_171824, intron 1 of 6)	intron (NM_171824, intron 1 of 6)	12199	NM_171824	209966	Mm.234233	NM_171824	ENSMUSG00000050751	Pgbd5	2900019M05Rik|AI854313	piggyBac transposable element derived 5	protein-coding
common_peak1-14079-11-7-0.508693584251613-1.21681515183528	chr2	121448092	121448762	+	0	NA	intron (NM_172673, intron 1 of 14)	B4|SINE|B4	115968	NM_001290986	241627	Mm.293284	NM_030234	ENSMUSG00000027242	Wdr76	5830411K18Rik|6030457D09|AA517836	WD repeat domain 76	protein-coding
unique_peak2-33996-5-16--1.79184317725619-1.61682445937017	chr12	87199700	87200448	+	0	NA	intron (NM_001081423, intron 7 of 33)	intron (NM_001081423, intron 7 of 33)	34174	NM_001081423	320244	Mm.132172	NM_177114	ENSMUSG00000012609	Ttll5	1700048H13Rik|2310009M18Rik|4930556H18Rik|AI428864|D630041K24Rik|R75373|Stamp|mKIAA0998	tubulin tyrosine ligase-like family, member 5	protein-coding
common_peak1-10241-22-23-0.0623216043662485-0.319130838712456	chr13	54071685	54072734	+	0	NA	Intergenic	MLT1B|LTR|MaLR	77940	NM_001291801	13488	Mm.54161	NM_010076	ENSMUSG00000021478	Drd1a	C030036C15Rik|Drd-1|Drd1|Gpcr15	dopamine receptor D1A	protein-coding
unique_peak1-6986-11-5-0.923731083530457-1.477227296591	chr8	120418733	120419359	+	0	NA	Intergenic	Intergenic	-93217	NM_026758	68533	Mm.181836	NM_026758	ENSMUSG00000031843	Mphosph6	1110001M01Rik|AA536809|C86426	M phase phosphoprotein 6	protein-coding
unique_peak2-33064-10-22--1.16714661104824-1.30248952876293	chr10	77569582	77570345	+	0	NA	Intergenic	Intergenic	37850	NM_015790	50723	Mm.17819	NM_015790	ENSMUSG00000000732	Icosl	AU044799|B7-H2|B7RP-1|B7h|BG071784|GI50|GL50|GL50-B|ICOS-L|Icoslg|LICOS|Ly115l|mKIAA0653	icos ligand	protein-coding
common_peak2-26371-54-72--0.0167387972502837-0.301029995663963	chr2	39225593	39226521	+	0	NA	Intergenic	Intergenic	-144199	NM_024209	67857	Mm.389242	NM_024209		Ppp6c	2310003C10Rik	protein phosphatase 6, catalytic subunit	protein-coding
common_peak1-8411-8-15--0.994777582052429-0.771068449301683	chr10	70095343	70095782	+	0	NA	intron (NR_045291, intron 1 of 5)	intron (NR_045291, intron 1 of 5)	19111	NR_045291	319646	Mm.483039	NR_045291	ENSMUSG00000037747	D630013N20Rik	-	RIKEN cDNA D630013N20 gene	ncRNA
common_peak2-30395-11-10-0.0492619656143161-0.31137425193576	chr7	31151133	31151606	+	0	NA	Intergenic	ORR1D2|LTR|MaLR	-3578	NM_175478	233067	Mm.23157	NM_175478	ENSMUSG00000036957	Lrfn3	A530045B06Rik|SALM4	leucine rich repeat and fibronectin type III domain containing 3	protein-coding
unique_peak1-5472-7-4-0.477162735410827-1.09384600808989	chr5	125166606	125167047	+	0	NA	intron (NM_011596, intron 9 of 19)	intron (NM_011596, intron 9 of 19)	-38629	NM_019536	56087	Mm.261014	NM_019536	ENSMUSG00000038011	Dnah10	Dnahc10	dynein, axonemal, heavy chain 10	protein-coding
common_peak2-32016-9-4-0.867685311516858-1.36011389749466	chr9	75196209	75196496	+	0	NA	intron (NM_013479, intron 1 of 1)	ID_B1|SINE|B4	787	NM_013479	12049	Mm.25988	NM_013479	ENSMUSG00000032191	Bcl2l10	AA420380|AU023065|Boo|C85687|Diva	Bcl2-like 10	protein-coding
common_peak1-10422-13-17--0.391452970804544-0.364171515310935	chr13	99238572	99239444	+	0	NA	Intergenic	L1M4|LINE|L1	-33988	NR_045498	70090	Mm.410857	NR_045498		2310005E17Rik	-	RIKEN cDNA 2310005E17 gene	ncRNA
common_peak2-30988-24-36--0.416243462861233-0.518746288394493	chr8	3676477	3677277	+	0	NA	intron (NM_025701, intron 1 of 1)	intron (NM_025701, intron 1 of 1)	400	NM_025701	66682	Mm.29090	NM_025701		Trappc5	4021401A16Rik|TRS31	trafficking protein particle complex 5	protein-coding
common_peak1-12544-49-90--0.501510817173513-1.25880250360973	chr18	5591853	5593116	+	0	NA	promoter-TSS (NR_033552)	promoter-TSS (NR_033552)	-49	NR_033552	791318	Mm.84339	NR_033552	ENSMUSG00000063087	Gm10125	ENSMUSG00000063087|Zeb1os	predicted gene 10125	ncRNA
unique_peak2-38261-6-7--0.434601889619698-0.97990265578305	chr6	125380000	125380466	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-49711	NM_198604	213522	Mm.333396	NM_198604	ENSMUSG00000038167	Plekhg6	BC026778|Gm155	pleckstrin homology domain containing, family G (with RhoGef domain) member 6	protein-coding
common_peak2-20294-12-7-0.648775985087639-0.697979855752659	chr1	193411978	193412350	+	0	NA	intron (NM_178632, intron 4 of 19)	intron (NM_178632, intron 4 of 19)	12551	NM_178632	77065	Mm.338175	NM_178632	ENSMUSG00000037461	Ints7	5930412E23Rik	integrator complex subunit 7	protein-coding
unique_peak2-38554-6-4-0.24347001549294-0.989110657569874	chr7	63924146	63924536	+	0	NA	Intergenic	Intergenic	429200	NM_021879	18431	Mm.137052	NM_021879	ENSMUSG00000030450	Oca2	D7H15S12|D7Icr28RN|D7Nic1|p	oculocutaneous albinism II	protein-coding
common_peak2-23782-14-14--0.00767443525087419-0.308519316180257	chr15	99369966	99370431	+	0	NA	Intergenic	Intergenic	-11602	NM_001038658	72393	Mm.39760	NM_028224	ENSMUSG00000023011	Faim2	2900002L20Rik|Lfg|Lfg2|NMP25|Nmp35|Tmbim2	Fas apoptotic inhibitory molecule 2	protein-coding
common_peak2-28922-4-5--0.608423014574403-0.909929411522249	chr5	92808786	92809170	+	0	NA	intron (NM_181728, intron 2 of 9)	Lx7|LINE|L1	-16656	NR_038116	56066	Mm.131723	NM_019494	ENSMUSG00000060183	Cxcl11	Cxc11|H174|I-tac|Ip9|Itac|Scyb11|Scyb9b|b-R1|betaR1	chemokine (C-X-C motif) ligand 11	protein-coding
common_peak1-19308-24-42--0.633054851934381-0.913161965438649	chr9	122117229	122118018	+	0	NA	intron (NM_001271873, intron 11 of 12)	intron (NM_001271873, intron 11 of 12)	65523	NR_106185	102465896		NR_106185		Mir8106	mmu-mir-8106	microRNA mir-8106	ncRNA
common_peak2-30970-17-11-0.633333837483882-0.769930178837768	chr8	126566379	126566997	+	0	NA	intron (NM_001029876, intron 7 of 8)	intron (NM_001029876, intron 7 of 8)	19315	NM_001029876	382038	Mm.334891	NM_001029876	ENSMUSG00000031976	Urb2	C77575|mKIAA0133	URB2 ribosome biogenesis 2 homolog (S. cerevisiae)	protein-coding
common_peak2-19621-28-46--0.501629731856175-0.767679714496325	chr1	36555962	36557289	+	0	NA	intron (NM_033570, intron 4 of 6)	intron (NM_033570, intron 4 of 6)	-12096	NM_001039551	94218	Mm.256323	NM_053186	ENSMUSG00000001138	Cnnm3	Acdp3|Clp3|mACDP3	cyclin M3	protein-coding
common_peak1-16331-20-18-0.240147271147608-0.388034239052786	chr5	117279420	117280302	+	0	NA	Intergenic	L2a|LINE|L2	-238035	NM_026886	68955	Mm.146779	NM_026886	ENSMUSG00000063919	Srrm4	1500001A10Rik|B230202K19Rik|bv|mKIAA1853|nSR100	serine/arginine repetitive matrix 4	protein-coding
common_peak2-26458-44-70--0.327854284936147-0.590496457913116	chr2	73910480	73912021	+	0	NA	Intergenic	Intergenic	-161899	NM_175015	228033	Mm.2966	NM_175015	ENSMUSG00000018770	Atp5g3	6030447M23	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9)	protein-coding
common_peak1-12284-26-31--0.0721009078415378-0.304589945962371	chr17	44814026	44815294	+	0	NA	intron (NR_073392, intron 4 of 7)	intron (NR_073392, intron 4 of 7)	58465	NR_073425	12393	Mm.391013	NM_009820	ENSMUSG00000039153	Runx2	AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a	runt related transcription factor 2	protein-coding
common_peak2-24534-21-11-0.984526764545079-1.3750876294627	chr17	27153394	27153988	+	0	NA	Intergenic	Intergenic	-1289	NM_001251881	70772	Mm.440437	NM_027544	ENSMUSG00000048731	Ggnbp1	0610031G08Rik|mdf	gametogenetin binding protein 1	protein-coding
unique_peak1-2870-12-7-0.648775985087639-0.697979855752659	chr17	35185737	35186480	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-1080	NM_033444	114584	Mm.29524	NM_033444		Clic1	Clcp|G6	chloride intracellular channel 1	protein-coding
unique_peak2-37145-8-16--1.08224042330277-0.891319708951328	chr4	32250818	32251564	+	0	NA	Intergenic	ORR1E|LTR|MaLR	200109	NM_172688	26409	Mm.258589	NM_009316	ENSMUSG00000028284	Map3k7	B430101B05|C87327|Tak1	mitogen-activated protein kinase kinase kinase 7	protein-coding
unique_peak1-7414-8-2-1.42025991722641-1.65811743852845	chrX	139809825	139810365	+	0	NA	intron (NM_031258, intron 2 of 8)	MTD-int|LTR|MaLR	18710	NM_031258	83453	Mm.157697	NM_031258	ENSMUSG00000031283	Chrdl1	CHL|CHL1|Nrln1|VOPT	chordin-like 1	protein-coding
common_peak2-25620-15-10-0.552733131918359-0.604422558181019	chr19	9039739	9040195	+	0	NA	exon (NM_197993, exon 9 of 9)	exon (NM_197993, exon 9 of 9)	-1564	NM_026007	67160	Mm.247762	NM_026007	ENSMUSG00000071644	Eef1g	2610301D06Rik|AA407312|EF1G	eukaryotic translation elongation factor 1 gamma	protein-coding
unique_peak1-1870-10-4-1.03448725012141-1.5150158574804	chr14	56575549	56576142	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-4637	NR_028284	17223	Mm.437339	NR_028284		Mcpt-ps1	MMCP-(Y)1|Mmcpy1	mast cell protease, pseudogene 1	pseudo
unique_peak2-37959-8-8--0.164702583494742-1.00793137938329	chr6	15728456	15728980	+	0	NA	intron (NM_175088, intron 4 of 4)	intron (NM_175088, intron 4 of 4)	58057	NM_175088	16543	Mm.1314	NM_175088	ENSMUSG00000041390	Mdfic	Kdt1|Mdfid	MyoD family inhibitor domain containing	protein-coding
unique_peak1-4692-12-5-1.06381348436648-1.78669045979184	chr3	96808297	96808985	+	0	NA	Intergenic	Intergenic	-27684	NM_001271628	14613	Mm.281816	NM_008121	ENSMUSG00000057123	Gja5	5730555N10Rik|Cnx40|Cx40|Gja-5	gap junction protein, alpha 5	protein-coding
unique_peak2-32729-11-7-0.508693584251613-1.21681515183528	chr1	162186554	162186968	+	0	NA	TTS (NM_013862)	TTS (NM_013862)	-43738	NM_009786	12301	Mm.10702	NM_009786	ENSMUSG00000014226	Cacybp	SIP	calcyclin binding protein	protein-coding
common_peak1-15811-36-25-0.778881368026663-1.55933022783608	chr5	41843540	41844910	+	0	NA	Intergenic	Intergenic	255169	NM_027295	100972	Mm.41555	NM_027295	ENSMUSG00000029128	Rab28	2700023P08Rik|AW496496	RAB28, member RAS oncogene family	protein-coding
common_peak1-15262-35-38-0.145968039600255-0.368093376636814	chr4	22357183	22358341	+	0	NA	intron (NR_104380, intron 8 of 8)	intron (NR_104380, intron 8 of 8)	57751	NM_008899	18992	Mm.129387	NM_008899	ENSMUSG00000095139	Pou3f2	9430075J19Rik|A230098E07Rik|Brn-2|Brn2|OTF-7|Otf7|oct-7	POU domain, class 3, transcription factor 2	protein-coding
unique_peak1-2561-11-3-1.50869358425161-1.95434855131066	chr16	24565757	24566319	+	0	NA	intron (NM_001145952, intron 3 of 11)	intron (NM_001145952, intron 3 of 11)	36638	NR_038091	624582	Mm.439775	NR_038091		A730098P11Rik	-	mortality factor 4 like 1 pseudogene	pseudo
common_peak1-11927-24-45--0.730352053289296-1.16863888781394	chr17	66518877	66519808	+	0	NA	Intergenic	L1_Mus3|LINE|L1	46482	NM_001003919	320209	Mm.259605	NM_001003919	ENSMUSG00000035842	Ddx11	4732462I11Rik|CHL1|CHLR1|KRG2|essa15a	DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11	protein-coding
common_peak2-25530-5-7--0.704380336005853-1.01466476204226	chr19	5814843	5815189	+	0	NA	Intergenic	B3A|SINE|B2	-12345	NR_002847	72289	Mm.298256	NR_002847	ENSMUSG00000092341	Malat1	2210401K01Rik|9430072K23Rik|AI647968|Neat2	metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)	ncRNA
unique_peak2-36395-6-7--0.434601889619698-0.97990265578305	chr2	121457112	121457528	+	0	NA	intron (NM_172673, intron 1 of 14)	(T)n|Simple_repeat|Simple_repeat	124861	NM_001290986	241627	Mm.293284	NM_030234	ENSMUSG00000027242	Wdr76	5830411K18Rik|6030457D09|AA517836	WD repeat domain 76	protein-coding
common_peak1-8135-33-31-0.331337562525529-0.549429090733244	chr1	189921536	189922550	+	0	NA	intron (NM_011935, intron 3 of 6)	intron (NM_011935, intron 3 of 6)	-89174	NR_038007	320272	Mm.446274	NR_038007		9330162B11Rik	-	RIKEN cDNA 9330162B11 gene	ncRNA
unique_peak2-32594-4-6--0.830815435910851-0.989110657569874	chr1	90446148	90446596	+	0	NA	Intergenic	Intergenic	-1720	NR_037971	100503197	Mm.99352	NR_037971		Gm19589	-	predicted gene, 19589	ncRNA
common_peak2-29578-89-114-0.189476703881628-0.557381047291801	chr6	48085416	48086811	+	0	NA	Intergenic	B3|SINE|B2	-49521	NM_001163475	69228	Mm.207555	NM_001163475	ENSMUSG00000057691	Zfp746	2810407L07Rik|AI317225|Znf746	zinc finger protein 746	protein-coding
unique_peak1-4235-9-2-1.60465090568306-1.87199725847353	chr2	124854707	124855169	+	0	NA	Intergenic	Intergenic	-38925	NM_175034	317750	Mm.330538	NM_175034	ENSMUSG00000035183	Slc24a5	F630045L20Rik|JSX|NCKX5|NCX5|Oca6	solute carrier family 24, member 5	protein-coding
unique_peak2-39832-12-7-0.648775985087639-0.697979855752659	chrX	48466594	48467085	+	0	NA	3' UTR (NM_134163, exon 8 of 8)	3' UTR (NM_134163, exon 8 of 8)	92170	NM_134163	171170	Mm.295324	NM_134163		Mbnl3	A530038J18Rik|AI661274|CHCR|E430034C16Rik|MBLX|MBLX39|MBXL	muscleblind-like 3 (Drosophila)	protein-coding
common_peak2-29053-34-35-0.212143525558954-0.439405572480892	chr5	115564856	115566026	+	0	NA	intron (NM_007383, intron 2 of 9)	B1_Mus2|SINE|Alu	3914	NM_007383	11409	Mm.18759	NM_007383	ENSMUSG00000029545	Acads	AI196007|Bcd-1|Bcd1|Hdlq8|SCAD	acyl-Coenzyme A dehydrogenase, short chain	protein-coding
common_peak1-19137-62-96--0.189161383385043-0.446284217035615	chr9	82974351	82976166	+	0	NA	Intergenic	Intergenic	64956	NM_175074	94353	Mm.244426	NM_026122	ENSMUSG00000066456	Hmgn3	1110002A15Rik|6330514M13Rik|BB071015|TRIP7	high mobility group nucleosomal binding domain 3	protein-coding
unique_peak2-36548-1-7--2.62705701021674-1.80617997398389	chr2	165992104	165992490	+	0	NA	Intergenic	Intergenic	-11114	NM_028072	72043	Mm.1011	NM_028072	ENSMUSG00000006800	Sulf2	2010004N24Rik|AU020235|MSulf-2|mKIAA1247	sulfatase 2	protein-coding
unique_peak2-36012-2-6--1.72480917832092-1.26211192963361	chr19	40307378	40307725	+	0	NA	intron (NM_016861, intron 4 of 6)	intron (NM_016861, intron 4 of 6)	38555	NM_016861	54132	Mm.5567	NM_016861		Pdlim1	Clim1|mClim1	PDZ and LIM domain 1 (elfin)	protein-coding
common_peak1-9255-8-15--0.994777582052429-0.771068449301683	chr11	86814489	86814935	+	0	NA	Intergenic	B1F|SINE|Alu	-7448	NM_001005341	77864	Mm.191894	NM_001005341	ENSMUSG00000018427	Ypel2	6430570G24|E130113K08Rik	yippee-like 2 (Drosophila)	protein-coding
common_peak2-31856-14-11-0.314253659636488-0.435191258261915	chr9	50603918	50604442	+	0	NA	intron (NR_045601, intron 7 of 13)	intron (NR_045601, intron 7 of 13)	20850	NR_045601	102580	Mm.160035	NM_133981	ENSMUSG00000032059	Alg9	8230402H15Rik|AI747665|B430313H07Rik|Dibd1	asparagine-linked glycosylation 9 (alpha 1,2 mannosyltransferase)	protein-coding
common_peak2-23054-10-5-0.771452844287613-1.33892459842472	chr14	70206130	70206549	+	0	NA	promoter-TSS (NM_153514)	promoter-TSS (NM_153514)	-987	NM_153514	246710	Mm.102367	NM_153514	ENSMUSG00000022075	Rhobtb2	Dbc2|E130206H14Rik|mKIAA0717	Rho-related BTB domain containing 2	protein-coding
unique_peak2-32802-7-15--1.20090916970181-0.947446088118041	chr1	183297028	183297443	+	0	NA	intron (NM_028408, intron 1 of 5)	intron (NM_028408, intron 1 of 5)	14476	NM_001160211	72978	Mm.338083	NM_028408	ENSMUSG00000026514	Cnih3	2900075G08Rik|CNIH-3	cornichon homolog 3 (Drosophila)	protein-coding
common_peak2-32325-11-10-0.0492619656143161-0.31137425193576	chrX	73478141	73478672	+	0	NA	Intergenic	Intergenic	-31239	NM_001013760	238829	Mm.292319	NM_001013760	ENSMUSG00000071738	Gm4937	EG238829	predicted gene 4937	protein-coding
common_peak2-25208-83-116-0.0438579055227217-0.323937522245888	chr18	60747558	60749251	+	0	NA	intron (NM_133363, intron 2 of 6)	intron (NM_133363, intron 2 of 6)	2966	NM_133363	170947	Mm.159257	NM_133363		Myoz3	4833419K08Rik|Fatz-3	myozenin 3	protein-coding
unique_peak2-38536-8-8--0.164702583494742-1.00793137938329	chr7	46957868	46958280	+	0	NA	Intergenic	L1_Mus1|LINE|L1	184938	NM_001004139	70227	Mm.333800	NM_001004139	ENSMUSG00000068959	Zfp619	3000002G13Rik	zinc finger protein 619	protein-coding
common_peak2-31196-51-91--0.44863813045444-1.09572805394914	chr8	57651511	57653086	+	0	NA	Intergenic	Intergenic	733463	NM_175939	244486	Mm.67684	NM_175939	ENSMUSG00000046258	Adam29	-	a disintegrin and metallopeptidase domain 29	protein-coding
common_peak1-9746-131-166-0.321535567260542-1.37406938362181	chr12	49400053	49402409	+	0	NA	Intergenic	Lx3C|LINE|L1	-1082639	NM_001160112	15228	Mm.4704	NM_008241	ENSMUSG00000020950	Foxg1	2900064B05Rik|BF-1|Bf1|Hfh9|Hfhbf1	forkhead box G1	protein-coding
common_peak2-25688-14-12-0.198776442216552-0.373562084705529	chr19	15457904	15458393	+	0	NA	Intergenic	L1_Mus1|LINE|L1	540964	NM_001205339	107272	Mm.289936	NM_177420	ENSMUSG00000024640	Psat1	D8Ertd814e|EPIP|PSA|Psat	phosphoserine aminotransferase 1	protein-coding
common_peak1-17635-18-16-0.225456309978012-0.397739447719379	chr7	47110269	47111268	+	0	NA	Intergenic	Intergenic	337632	NM_001004139	70227	Mm.333800	NM_001004139	ENSMUSG00000068959	Zfp619	3000002G13Rik	zinc finger protein 619	protein-coding
common_peak1-9986-23-10-1.26233588587178-1.90052685918624	chr13	37715187	37716254	+	0	NA	Intergenic	Intergenic	-202187	NM_026830	68750	Mm.491109	NM_026830	ENSMUSG00000039087	Rreb1	1110037N09Rik|AA414966|B930013M22Rik	ras responsive element binding protein 1	protein-coding
unique_peak1-3843-24-3-2.79320990276772-5.35253599412607	chr2	4717513	4718589	+	0	NA	intron (NM_178663, intron 8 of 8)	intron (NM_178663, intron 8 of 8)	79174	NM_178663	209645	Mm.149539	NM_178663	ENSMUSG00000048186	Bend7	1110017O21Rik|E130319B15Rik	BEN domain containing 7	protein-coding
unique_peak2-39285-5-5--0.289342836727009-0.909929411522249	chr8	122476288	122476559	+	0	NA	intron (NM_009462, intron 10 of 13)	intron (NM_009462, intron 10 of 13)	-39947	NM_030209	78892	Mm.264680	NM_030209	ENSMUSG00000031825	Crispld2	1810049K24Rik|Lcrisp2|Lgl1|coffeecrisp	cysteine-rich secretory protein LCCL domain containing 2	protein-coding
common_peak2-26980-21-29--0.337401330342283-0.403610417161439	chr2	167631448	167632235	+	0	NA	Intergenic	Intergenic	115164	NR_015500	329562	Mm.123101	NM_177851	ENSMUSG00000006462	A530013C23Rik	-	RIKEN cDNA A530013C23 gene	ncRNA
common_peak2-22799-23-37--0.526160008934505-0.720235944639228	chr14	8214093	8214804	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-30539	NR_015568	68308	Mm.390669	NR_015568	ENSMUSG00000090585	4933406F09Rik	1700007H14Rik|4930429F21Rik|4930570O04Rik|Gm3768	RIKEN cDNA 4933406F09 gene	ncRNA
unique_peak2-33368-10-41--2.03590207776999-4.69161891904142	chr11	33513047	33513970	+	0	NA	Intergenic	Intergenic	-34551	NM_146017	216643	Mm.99989	NM_146017	ENSMUSG00000020159	Gabrp	-	gamma-aminobutyric acid (GABA) A receptor, pi	protein-coding
unique_peak1-1893-8-0-3.00522241794757-2.70926996097583	chr14	64963180	64963671	+	0	NA	intron (NM_001253715, intron 1 of 4)	intron (NM_001253715, intron 1 of 4)	72368	NM_001253716	110265	Mm.26713	NM_026322	ENSMUSG00000054733	Msra	2310045J23Rik|6530413P12Rik|MSR-A	methionine sulfoxide reductase A	protein-coding
unique_peak2-36681-13-25--0.921967687503323-0.983972868822056	chr3	32365054	32365996	+	0	NA	3' UTR (NM_008839, exon 20 of 20)	3' UTR (NM_008839, exon 20 of 20)	25366	NM_001195074	100502876	Mm.383358	NM_001195074	ENSMUSG00000091091	Kcnmb3	EG435726|Gm5707	potassium large conductance calcium-activated channel, subfamily M, beta member 3	protein-coding
common_peak2-29883-23-26--0.0331199976543877-0.301029995663988	chr6	112889128	112889936	+	0	NA	intron (NM_080448, intron 1 of 21)	intron (NM_080448, intron 1 of 21)	7728	NM_080448	259302	Mm.236401	NM_080448	ENSMUSG00000030257	Srgap3	AI452337|Arhgap14|D130026O08Rik|Gbi|MEGAP|WRP|mKIAA0411	SLIT-ROBO Rho GTPase activating protein 3	protein-coding
common_peak1-18931-12-8-0.478850983645327-0.562038191119709	chr9	45504453	45505167	+	0	NA	intron (NM_001081270, intron 11 of 32)	intron (NM_001081270, intron 11 of 32)	131911	NM_001081373	214552	Mm.260103	NM_172531	ENSMUSG00000043987	Cep164	AI450905|BC027092|D030051D21|mKIAA1052	centrosomal protein 164	protein-coding
unique_peak2-33751-8-8--0.164702583494742-1.00793137938329	chr11	117114538	117115001	+	0	NA	intron (NM_001113486, intron 2 of 11)	intron (NM_001113486, intron 2 of 11)	-12791	NM_001113487	53860	Mm.38450	NM_017380	ENSMUSG00000059248	Sept9	MSF1|Msf|PNUTL4|Sint1	septin 9	protein-coding
common_peak1-14235-70-52-0.8920464618122-3.41416977378307	chr2	153160813	153162406	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	9937	NR_040318	72326	Mm.400102	NR_040318	ENSMUSG00000073236	2500004C02Rik	-	RIKEN cDNA 2500004C02 gene	ncRNA
common_peak1-10453-9-20--1.20270401637454-1.23014042908325	chr13	108214429	108214938	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	-45219	NR_045083	105120	Mm.417700	NR_045083		AI197445	-	expressed sequence AI197445	ncRNA
common_peak2-19879-16-17--0.0516613591742505-0.301029995663984	chr1	93679386	93680208	+	0	NA	Intergenic	Intergenic	-18257	NM_007855	13345	Mm.9474	NM_007855	ENSMUSG00000007805	Twist2	Dermo1|bHLHa39	twist basic helix-loop-helix transcription factor 2	protein-coding
common_peak2-20119-14-8-0.729291158915332-0.771068449301682	chr1	162740680	162741240	+	0	NA	Intergenic	L1MC4|LINE|L1	-17891	NM_013862	29809	Mm.25833	NM_013862	ENSMUSG00000026721	Rabgap1l	5830411O09Rik|8430421H08Rik|9630005B12Rik|AW049894|HHL|Hh1|mKIAA0471	RAB GTPase activating protein 1-like	protein-coding
unique_peak2-35341-3-6--1.22133801201688-1.08602067057793	chr17	24250921	24251270	+	0	NA	intron (NM_001286662, intron 1 of 13)	B4A|SINE|B4	27466	NM_011062	18607	Mm.10504	NM_011062	ENSMUSG00000024122	Pdpk1	Pdk1	3-phosphoinositide dependent protein kinase 1	protein-coding
common_peak2-28788-23-8-1.55184250306677-2.47979361197949	chr5	64095445	64095859	+	0	NA	intron (NM_177006, intron 1 of 6)	intron (NM_177006, intron 1 of 6)	55310	NM_177006	319807	Mm.319487	NM_028470	ENSMUSG00000090061	Nwd2	3110047P20Rik|B830017A01Rik|Hn1-ps2|mKIAA1239	NACHT and WD repeat domain containing 2	protein-coding
common_peak2-20221-12-16--0.4386868561627-0.368541233333383	chr1	180777747	180778333	+	0	NA	intron (NM_001161665, intron 5 of 14)	intron (NM_001161665, intron 5 of 14)	318784	NM_001161665	269152	Mm.129727	NM_177724	ENSMUSG00000026494	Kif26b	4832420M10|BC056349|D230039L06Rik	kinesin family member 26B	protein-coding
unique_peak1-153-11-3-1.50869358425161-1.95434855131066	chr1	72755974	72756513	+	0	NA	Intergenic	MER112|DNA|MER1_type	-1591	NM_009084	19981	Mm.21529	NM_009084	ENSMUSG00000046330	Rpl37a	-	ribosomal protein L37a	protein-coding
common_peak2-25963-13-4-1.45654393575041-2.23384849113406	chr19	53040511	53040857	+	0	NA	Intergenic	Intergenic	43013	NR_030678	100043450	Mm.145594	NR_030678		AA387883	-	expressed sequence AA387883	ncRNA
common_peak2-32042-15-13-0.204809828498052-0.368541233333383	chr9	79215294	79215930	+	0	NA	Intergenic	Intergenic	151497	NR_045336	100038575	Mm.367838	NR_045336		Gm10635	ENSMUSG00000074174	predicted gene 10635	ncRNA
common_peak2-28679-19-8-1.23276232521937-1.61268301619756	chr5	32349423	32349875	+	0	NA	intron (NM_181281, intron 9 of 10)	L1_Mus1|LINE|L1	-89196	NM_008037	14284	Mm.24684	NM_008037	ENSMUSG00000029135	Fosl2	Fra-2	fos-like antigen 2	protein-coding
common_peak2-28461-15-20--0.380152672223105-0.397739447719386	chr4	151995167	151996159	+	0	NA	Intergenic	Intergenic	-75986	NR_033138	330004	Mm.291863	NM_001033414		Gm833	-	predicted gene 833	ncRNA
unique_peak2-33372-5-10--1.16381195464315-1.33892459842472	chr11	40692130	40692664	+	0	NA	Intergenic	Intergenic	-123609	NM_009831	12450	Mm.2103	NM_009831	ENSMUSG00000020326	Ccng1	AI314029	cyclin G1	protein-coding
common_peak2-25460-62-31-1.41075145880208-5.97620393694059	chr19	4229514	4230847	+	0	NA	Intergenic	Intergenic	-1719	NM_027196	69745	Mm.32518	NM_027196	ENSMUSG00000024854	Pold4	2410012M21Rik|AI463381|AW060307|Polds|p12	polymerase (DNA-directed), delta 4	protein-coding
common_peak1-9109-17-14-0.311405742596519-0.466170754204149	chr11	72441114	72441923	+	0	NA	intron (NM_025985, intron 1 of 5)	intron (NM_025985, intron 1 of 5)	20755	NM_025985	67128	Mm.458052	NM_025985	ENSMUSG00000020794	Ube2g1	2700059C12Rik|AI256795|AU014992|AW552068|D130023C12Rik	ubiquitin-conjugating enzyme E2G 1	protein-coding
unique_peak1-2543-25-6-2.0544949832875-3.87314773301527	chr16	22844116	22845125	+	0	NA	intron (NM_001081368, intron 1 of 7)	intron (NM_001081368, intron 1 of 7)	13022	NM_001081368	70573	Mm.68291	NM_001081368	ENSMUSG00000004462	Tbccd1	5730478M09Rik|AU015083|BB165076	TBCC domain containing 1	protein-coding
common_peak2-19799-19-18-0.154759813218101-0.351190433797598	chr1	87574899	87575570	+	0	NA	intron (NM_013673, intron 9 of 19)	intron (NM_013673, intron 9 of 19)	28609	NM_013673	20684	Mm.290906	NM_013673	ENSMUSG00000026222	Sp100	A430075G10Rik	nuclear antigen Sp100	protein-coding
common_peak1-16868-35-63--0.568629741537496-1.12538602347822	chr6	57702623	57704134	+	0	NA	3' UTR (NM_146168, exon 5 of 5)	3' UTR (NM_146168, exon 5 of 5)	50929	NM_133737	71835	Mm.274904	NM_133737		Lancl2	1700003F10Rik	LanC (bacterial lantibiotic synthetase component C)-like 2	protein-coding
common_peak2-30893-34-56--0.450821487163475-0.736813861928694	chr7	142083774	142084947	+	0	NA	intron (NM_001143802, intron 3 of 3)	intron (NM_001143802, intron 3 of 3)	45753	NM_001143802	627214	Mm.323610	NM_001143802	ENSMUSG00000073805	Fam196a	B830028B13Rik	family with sequence similarity 196, member A	protein-coding
common_peak2-30603-62-106--0.330715527599062-0.803416426948883	chr7	83883151	83885090	+	0	NA	intron (NM_001199224, intron 20 of 22)	L1Md_F2|LINE|L1	509347	NM_001199224	244071	Mm.322829	NM_172902	ENSMUSG00000025754	Agbl1	Ccp4|D430020F16|EG244071|Nna1-l1	ATP/GTP binding protein-like 1	protein-coding
common_peak2-21624-10-8-0.186490343566457-1.078512453669	chr11	101003696	101004038	+	0	NA	Intergenic	RSINE1|SINE|B4	-13331	NM_134028	103768	Mm.142348	NM_134028	ENSMUSG00000045007	Tubg2	AI504772|Tubgl	tubulin, gamma 2	protein-coding
common_peak2-29034-8-9--0.316705676939792-1.03275496310833	chr5	114357615	114358138	+	0	NA	intron (NM_011779, intron 1 of 10)	intron (NM_011779, intron 1 of 10)	839	NM_011779	23790	Mm.260158	NM_011779	ENSMUSG00000004530	Coro1c	AL022675|AW455561|AW548837	coronin, actin binding protein 1C	protein-coding
unique_peak1-4840-10-4-1.03448725012141-1.5150158574804	chr3	152142117	152142606	+	0	NA	intron (NM_001081277, intron 11 of 13)	intron (NM_001081277, intron 11 of 13)	82713	NM_001287139	108946	Mm.379292	NM_198416	ENSMUSG00000039068	Zzz3	3110065C23Rik|6430567E01Rik|AA408566|AI481057|AW556059|R75514	zinc finger, ZZ domain containing 3	protein-coding
common_peak1-16470-12-11-0.0638134843664826-0.337263207250336	chr5	137080643	137081353	+	0	NA	Intergenic	RSINE1|SINE|B4	-37638	NM_001291238	13047	Mm.320317	NM_009986	ENSMUSG00000029705	Cux1	CDP|Cutl1|Cux|Cux-1	cut-like homeobox 1	protein-coding
common_peak1-16831-21-26--0.185398236897233-0.318406410381916	chr6	50454999	50456055	+	0	NA	Intergenic	Intergenic	-49358	NM_001163645	71720	Mm.44153	NM_027881	ENSMUSG00000029822	Osbpl3	1200014M06Rik|6720421I08Rik|A530055M08|ORP3|OSBP3	oxysterol binding protein-like 3	protein-coding
common_peak1-17814-12-18--0.599151528355947-0.476916024233333	chr7	101905304	101905845	+	0	NA	Intergenic	Intergenic	-1453573	NM_011858	23966	Mm.254610	NM_011858	ENSMUSG00000048078	Tenm4	Doc4|ELM2|Odz4|R75022|Ten-m4|l(7)-3Rn|l7Rn3|mKIAA1302	teneurin transmembrane protein 4	protein-coding
common_peak1-15582-55-60-0.273882533589815-0.619228716864132	chr4	128805556	128806794	+	0	NA	Intergenic	Intergenic	-7006	NM_001286081	15444	Mm.384452	NM_010471	ENSMUSG00000028785	Hpca	-	hippocalcin	protein-coding
common_peak1-12235-30-39--0.15225268539549-0.327094617740873	chr17	35134686	35135982	+	0	NA	Intergenic	RNERVK23-int|LTR|ERVK	-2518	NM_011690	22321	Mm.28420	NM_011690	ENSMUSG00000007029	Vars	Bat6|D17H6S56E|G7a|Vars2	valyl-tRNA synthetase	protein-coding
common_peak1-19182-11-8-0.338768582809301-1.14218153353838	chr9	99131178	99131716	+	0	NA	intron (NM_001244762, intron 4 of 4)	URR1B|DNA|MER1_type	6211	NM_001244762	623459	Mm.260891	NM_001244762	ENSMUSG00000096316	Gm6432	EG623459	predicted gene 6432	protein-coding
common_peak2-23676-8-8--0.164702583494742-1.00793137938329	chr15	85675044	85675533	+	0	NA	intron (NM_001033337, intron 7 of 13)	intron (NM_001033337, intron 7 of 13)	12554	NM_001033337	239570	Mm.151748	NM_001033337	ENSMUSG00000035944	Ttc38	9030019H09	tetratricopeptide repeat domain 38	protein-coding
unique_peak2-39081-1-7--2.62705701021674-1.80617997398389	chr8	73275485	73275830	+	0	NA	TTS (NM_201607)	TTS (NM_201607)	-2921	NM_009001	19339	Mm.5083	NM_009001	ENSMUSG00000031840	Rab3a	-	RAB3A, member RAS oncogene family	protein-coding
common_peak1-16351-24-41--0.599107520011044-0.83607543869935	chr5	121384944	121385668	+	0	NA	Intergenic	L1Md_F3|LINE|L1	20479	NM_133893	100535	Mm.247620	NM_133893	ENSMUSG00000032623	Oas1d	AA536864|C85127|oasl8	2'-5' oligoadenylate synthetase 1D	protein-coding
unique_peak1-6473-8-1-2.00522241794757-2.05605744720049	chr7	110881816	110882242	+	0	NA	TTS (NM_147097)	TTS (NM_147097)	1587	NM_147097	259159	Mm.377843	NM_147097	ENSMUSG00000096516	Olfr628	MOR22-1|MOR22-4P|Olfr1526-ps1	olfactory receptor 628	protein-coding
common_peak2-26847-13-7-0.778472030637769-0.817533494790411	chr2	154407550	154408008	+	0	NA	Intergenic	B4A|SINE|B4	-12151	NM_007891	13555	Mm.18036	NM_007891	ENSMUSG00000027490	E2f1	E2F-1|mKIAA4009	E2F transcription factor 1	protein-coding
common_peak2-19866-29-37--0.135637432828474-0.313095283157754	chr1	92910702	92911319	+	0	NA	intron (NM_001111312, intron 1 of 12)	intron (NM_001111312, intron 1 of 12)	15706	NM_001111312	16978	Mm.45039	NM_008515	ENSMUSG00000026305	Lrrfip1	AU024550|Fliiap1	leucine rich repeat (in FLII) interacting protein 1	protein-coding
unique_peak2-35266-14-53--1.85567134180582-5.18845361146766	chr17	56475557	56476608	+	0	NA	intron (NM_172132, intron 1 of 22)	intron (NM_172132, intron 1 of 22)	10609	NM_172132	193796	Mm.45047	NM_172132	ENSMUSG00000024201	Kdm4b	4732474L06Rik|Jmjd2b|mKIAA0876	lysine (K)-specific demethylase 4B	protein-coding
common_peak2-28023-64-93--0.0891424499690343-0.331026524252985	chr4	48539847	48541162	+	0	NA	Intergenic	L1M2|LINE|L1	-12314	NM_001145925	66665	Mm.140749	NM_028137	ENSMUSG00000039693	Msantd3	2410046L14Rik|2810429P03Rik|5730528L13Rik|Mysantd3	Myb/SANT-like DNA-binding domain containing 3	protein-coding
common_peak1-10694-52-62-0.130980066765782-0.382291706502806	chr14	55643067	55644106	+	0	NA	TTS (NM_026890)	TTS (NM_026890)	9295	NM_026890	68966	Mm.21214	NM_026890	ENSMUSG00000022204	Ngdn	1500001L15Rik|Ngd|neuroguidin	neuroguidin, EIF4E binding protein	protein-coding
common_peak1-15783-13-7-0.778472030637769-0.817533494790411	chr4	155487581	155488165	+	0	NA	intron (NM_177205, intron 1 of 9)	intron (NM_177205, intron 1 of 9)	3766	NM_177205	230996	Mm.318925	NM_145557	ENSMUSG00000059939	9430015G10Rik	-	RIKEN cDNA 9430015G10 gene	protein-coding
common_peak1-13609-18-18-0.0649916377847664-0.323898164595606	chr2	20735909	20736838	+	0	NA	Intergenic	Intergenic	152975	NM_001081364	71435	Mm.28507	NM_001081364	ENSMUSG00000036591	Arhgap21	5530401C11Rik|AA416458|ARHGAP10	Rho GTPase activating protein 21	protein-coding
unique_peak2-34345-5-6--0.511735258063458-0.947717972411649	chr13	99353440	99353919	+	0	NA	Intergenic	Intergenic	53686	NM_026685	68344	Mm.28766	NM_026685	ENSMUSG00000046082	Tmem174	0610009B10Rik|AA986094	transmembrane protein 174	protein-coding
unique_peak2-32496-7-17--1.37083417114412-1.23399803405144	chr1	44147855	44148475	+	0	NA	intron (NM_029368, intron 5 of 7)	intron (NM_029368, intron 5 of 7)	11068	NM_029368	75623	Mm.348017	NM_029368	ENSMUSG00000026049	Tex30	1700029F09Rik|3110030D08Rik	testis expressed 30	protein-coding
common_peak2-26231-33-34-0.202054545580562-0.406785247261493	chr2	27677314	27678154	+	0	NA	Intergenic	Intergenic	-64211	NM_015734	12831	Mm.7281	NM_015734	ENSMUSG00000026837	Col5a1	AI413331	collagen, type V, alpha 1	protein-coding
common_peak1-19494-17-9-0.896368243317676-1.09394599973099	chrX	158042918	158043544	+	0	NA	Intergenic	Intergenic	-111737	NM_001103367	24004	Mm.328503	NM_198409	ENSMUSG00000043518	Rai2	3f8	retinoic acid induced 2	protein-coding
unique_peak1-249-10-1-2.35641534500877-2.57096726280955	chr1	91442970	91443599	+	0	NA	intron (NM_001037136, intron 1 of 16)	intron (NM_001037136, intron 1 of 16)	91898	NM_001037136	347722	Mm.291135	NM_178119	ENSMUSG00000055013	Agap1	Centg2|Ggap1|R75364|mKIAA1099	ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	protein-coding
common_peak1-12619-31-14-1.3183480752046-2.63673708350641	chr18	32146467	32147713	+	0	NA	intron (NM_032394, intron 19 of 46)	intron (NM_032394, intron 19 of 46)	-37800	NM_001025381	574402	Mm.391108	NM_001025381	ENSMUSG00000052229	Gpr17	AI853548	G protein-coupled receptor 17	protein-coding
common_peak1-8486-9-6-0.382258484346616-1.11707584880836	chr10	80679851	80680337	+	0	NA	intron (NM_178662, intron 3 of 12)	(GAAA)n|Simple_repeat|Simple_repeat	13430	NM_178662	16467	Mm.127681	NM_178662	ENSMUSG00000034958	Atcay	3322401A10Rik|BB077577|BNIP-H|CLAC|hes|ji	ataxia, cerebellar, Cayman type homolog (human)	protein-coding
common_peak2-20791-24-42--0.633054851934381-0.913161965438649	chr10	121739546	121740563	+	0	NA	Intergenic	B4|SINE|B4	-145501	NM_016847	54140	Mm.4351	NM_016847	ENSMUSG00000020123	Avpr1a	AVPR|Avpr1|V1a|V1aR	arginine vasopressin receptor 1A	protein-coding
unique_peak2-37450-4-6--0.830815435910851-0.989110657569874	chr4	156067664	156067946	+	0	NA	Intergenic	Intergenic	-458839	NM_198305	231003	Mm.423038	NM_198305	ENSMUSG00000078484	Klhl17	AL022703|BC058738	kelch-like 17	protein-coding
unique_peak2-33262-5-13--1.51173525806346-1.78669045979184	chr10	128409148	128409843	+	0	NA	Intergenic	ID_B1|SINE|B4	-11451	NM_027853	71664	Mm.337232	NM_027853	ENSMUSG00000025347	Mettl7b	0610006F02Rik|AI266817	methyltransferase like 7B	protein-coding
unique_peak2-35357-2-10--2.37688587490062-2.09384600808989	chr17	26414933	26415538	+	0	NA	intron (NM_028190, intron 7 of 9)	intron (NM_028190, intron 7 of 9)	25380	NR_037905	66978	Mm.440216	NM_025881	ENSMUSG00000024188	Luc7l	1810045C04Rik|2410018D03Rik	Luc7 homolog (S. cerevisiae)-like	protein-coding
common_peak1-19133-17-23--0.366666162516118-0.383878263347744	chr9	79759238	79760007	+	0	NA	intron (NM_001081243, intron 1 of 5)	intron (NM_001081243, intron 1 of 5)	66067	NM_001081243	70598	Mm.23049	NM_001081243	ENSMUSG00000034898	Filip1	5730485H21Rik|AI843021	filamin A interacting protein 1	protein-coding
common_peak2-31229-6-7--0.434601889619698-0.97990265578305	chr8	69936741	69937089	+	0	NA	Intergenic	L1Md_A|LINE|L1	-77742	NM_008673	17960	Mm.14125	NM_008673	ENSMUSG00000025588	Nat1	Nat-1	N-acetyl transferase 1	protein-coding
common_peak2-21352-113-112-0.628490783281522-3.32861144773262	chr11	77784957	77787130	+	0	NA	intron (NM_001291225, intron 5 of 15)	intron (NM_001291225, intron 5 of 15)	-10275	NM_174852	268448	Mm.274329	NM_174852	ENSMUSG00000037791	Phf12	2410142K10Rik|F630045O13|PF1|mKIAA1523	PHD finger protein 12	protein-coding
common_peak2-30326-33-26-0.576450060362061-0.950816664083185	chr7	25076293	25077008	+	0	NA	exon (NM_009561, exon 7 of 7)	exon (NM_009561, exon 7 of 7)	7918	NM_009561	22719	Mm.12832	NM_009561	ENSMUSG00000050605	Zfp61	-	zinc finger protein 61	protein-coding
common_peak1-10712-16-19--0.203664452619301-0.325169893479371	chr14	60418886	60419627	+	0	NA	intron (NM_015803, intron 27 of 35)	intron (NM_015803, intron 27 of 35)	175138	NM_145463	219134	Mm.275409	NM_145463	ENSMUSG00000044461	Shisa2	9430059P22Rik|MAd2|Tmem46|mShisa|shisa	shisa homolog 2 (Xenopus laevis)	protein-coding
unique_peak2-33176-15-26--0.742722751607812-0.823046386575433	chr10	95563210	95564086	+	0	NA	Intergenic	Intergenic	-125193	NR_110448	74881	Mm.410819	NR_110448		4930459C07Rik	-	RIKEN cDNA 4930459C07 gene	ncRNA
common_peak1-15431-19-33--0.684775514588653-0.884951936461256	chr4	89049419	89050213	+	0	NA	Intergenic	Intergenic	-92875	NM_007670	12579	Mm.423094	NM_007670	ENSMUSG00000073802	Cdkn2b	AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b	cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)	protein-coding
common_peak2-23038-26-31--0.0721009078415378-0.304589945962371	chr14	67933025	67933996	+	0	NA	promoter-TSS (NM_001037931)	promoter-TSS (NM_001037931)	38	NM_001037931	628416	Mm.390723	NM_001037931	ENSMUSG00000075549	Gm6878	EG628416	predicted gene 6878	protein-coding
common_peak1-16913-13-8-0.608547029195456-0.660903317613904	chr6	72640669	72641322	+	0	NA	intron (NM_009332, intron 3 of 11)	L2a|LINE|L2	61170	NR_040421	100038714	Mm.321330	NR_040421		Gm15401	ENSMUSG00000072999|OTTMUSG00000021199	predicted gene 15401	ncRNA
unique_peak1-3079-9-0-3.18961340640422-3.01029995663981	chr18	21100372	21100955	+	0	NA	Intergenic	Intergenic	-2463	NM_026301	67664	Mm.45980	NM_026301	ENSMUSG00000033107	Rnf125	4930553F04Rik	ring finger protein 125	protein-coding
common_peak1-17269-35-50--0.241055083508991-0.415549183621393	chr6	134920387	134921671	+	0	NA	Intergenic	ID_B1|SINE|B4	-10990	NM_001109914	381823	Mm.296104	NM_001109914	ENSMUSG00000090698	Apold1	Gm1075	apolipoprotein L domain containing 1	protein-coding
common_peak2-27683-10-13--0.450939577048835-0.386243247519795	chr3	117038256	117038860	+	0	NA	intron (NM_177664, intron 1 of 6)	intron (NM_177664, intron 1 of 6)	25236	NM_177664	229791	Mm.140138	NM_177664	ENSMUSG00000044667	Lppr4	A330086D10|D3Bwg0562e|PRG-1|mKIAA0455	lipid phosphate phosphatase-related protein type 4	protein-coding
unique_peak1-6633-16-3-2.11826364226806-2.65002542325363	chr8	10924510	10925194	+	0	NA	non-coding (NR_030715, exon 3 of 3)	non-coding (NR_030715, exon 3 of 3)	3605	NR_030715	665306	Mm.358758	NR_030715	ENSMUSG00000038917	3930402G23Rik	-	RIKEN cDNA 3930402G23 gene	ncRNA
common_peak2-31894-57-72-0.0762084811989112-0.337470937500802	chr9	56994797	56996420	+	0	NA	promoter-TSS (NM_028347)	promoter-TSS (NM_028347)	-767	NM_028347	72774	Mm.35749	NM_028347	ENSMUSG00000032298	Neil1	2810450N13Rik|Nei1	nei endonuclease VIII-like 1 (E. coli)	protein-coding
common_peak1-10620-10-16--0.73104749624157-0.604422558181019	chr14	34311022	34311594	+	0	NA	Intergenic	Intergenic	-50964	NM_016700	26419	Mm.21495	NM_016700	ENSMUSG00000021936	Mapk8	AI849689|JNK|JNK1|Prkm8|SAPK1	mitogen-activated protein kinase 8	protein-coding
unique_peak1-1020-8-3-1.00522241794757-1.39487600375387	chr11	75215452	75215943	+	0	NA	exon (NM_001102611, exon 8 of 11)	exon (NM_001102611, exon 8 of 11)	20428	NM_011340	20317	Mm.2044	NM_011340	ENSMUSG00000000753	Serpinf1	AI195227|EPC-1|Pedf|Pedfl|Sdf3	serine (or cysteine) peptidase inhibitor, clade F, member 1	protein-coding
common_peak1-15018-21-43--0.889942353371062-1.48724131519613	chr3	116807731	116808746	+	0	NA	Intergenic	Intergenic	-27555	NR_038029	433646	Mm.158997	NR_038029	ENSMUSG00000028009	1700061I17Rik	-	RIKEN cDNA 1700061I17 gene	ncRNA
common_peak2-21080-9-19--1.13231468848314-1.09394599973099	chr11	50275054	50275707	+	0	NA	Intergenic	RMER1C|Other|Other	-30767	NM_172557	216724	Mm.390400	NM_172557	ENSMUSG00000020375	Rufy1	3000002E04Rik|Rabip4|ZFYVE12	RUN and FYVE domain containing 1	protein-coding
unique_peak2-36750-5-19--2.02630843089322-2.19184853030482	chr3	60493433	60494324	+	0	NA	Intergenic	RLTR33|LTR|ERVK	188704	NM_001253708	56758	Mm.255723	NM_020007	ENSMUSG00000027763	Mbnl1	Mbnl|mKIAA0428	muscleblind-like 1 (Drosophila)	protein-coding
common_peak2-24348-7-6--0.00826409175941478-0.97990265578305	chr17	5976816	5977172	+	0	NA	intron (NM_001113352, intron 2 of 25)	intron (NM_001113352, intron 2 of 25)	1408	NM_011523	20975	Mm.236068	NM_011523	ENSMUSG00000023805	Synj2	AI481647|SJ2|mKIAA0348	synaptojanin 2	protein-coding
common_peak2-22872-25-12-1.16141018720401-1.87883858401928	chr14	30564270	30565022	+	0	NA	Intergenic	Intergenic	-29596	NM_009785	12294	Mm.386754	NM_009785	ENSMUSG00000021991	Cacna2d3	Cacnad3	calcium channel, voltage-dependent, alpha2/delta subunit 3	protein-coding
common_peak1-11646-105-101-0.648908568551671-3.22234242566652	chr16	23106891	23108661	+	0	NA	non-coding (NR_110335, exon 1 of 12)	non-coding (NR_110335, exon 1 of 12)	235	NR_110335	13682	Mm.260084	NM_013506	ENSMUSG00000022884	Eif4a2	4833432N07Rik|BM-010|Ddx2b|Eif4|eIF-4A-II|eIF4A-II	eukaryotic translation initiation factor 4A2	protein-coding
common_peak2-30613-17-27--0.589058583852566-0.604689589251113	chr7	89739185	89740083	+	0	NA	intron (NM_001190374, intron 23 of 29)	intron (NM_001190374, intron 23 of 29)	57404	NM_177894	330577	Mm.222812	NM_177894	ENSMUSG00000038570	Fam154b	1700129I04Rik|D030069K18	family with sequence similarity 154, member B	protein-coding
common_peak1-10266-119-141-0.388690801625362-1.6500259668133	chr13	55714041	55715787	+	0	NA	Intergenic	Intergenic	-9452	NM_007596	12328	Mm.2313	NM_007596	ENSMUSG00000021501	Caml	AI385748|Camlg	calcium modulating ligand	protein-coding
common_peak2-24599-18-20--0.0793982715504091-0.301029995663976	chr17	32349885	32350582	+	0	NA	intron (NM_001286630, intron 10 of 19)	intron (NM_001286630, intron 10 of 19)	-23825	NM_001033163	71932	Mm.176240	NM_001033163	ENSMUSG00000037577	Ephx3	2310063B19Rik|Abhd9	epoxide hydrolase 3	protein-coding
common_peak1-13692-32-41--0.113225403559101-0.311888488969622	chr2	30123884	30125112	+	0	NA	intron (NM_001281829, intron 2 of 11)	L2b|LINE|L2	2159	NM_001252570	227696	Mm.297949	NM_172267	ENSMUSG00000079484	Phyhd1	-	phytanoyl-CoA dioxygenase domain containing 1	protein-coding
unique_peak1-5630-21-6-1.76213434320863-2.81226952737395	chr6	14113853	14114914	+	0	NA	Intergenic	Intergenic	292814	NR_045995	76311	Mm.367129	NR_045995	ENSMUSG00000097616	1110019D14Rik	-	RIKEN cDNA 1110019D14 gene	ncRNA
common_peak2-24405-71-186--0.902450281167665-6.0043309051889	chr17	15009428	15010979	+	0	NA	intron (NM_175173, intron 23 of 24)	intron (NM_175173, intron 23 of 24)	69926	NM_175173	71682	Mm.122698	NM_175173	ENSMUSG00000046991	Wdr27	0610012K18Rik	WD repeat domain 27	protein-coding
common_peak1-13765-9-6-0.382258484346616-1.11707584880836	chr2	35132558	35133043	+	0	NA	intron (NM_001206367, intron 2 of 17)	MIRb|SINE|MIR	-5100	NM_146120	227753	Mm.21109	NM_146120	ENSMUSG00000026879	Gsn	ADF	gelsolin	protein-coding
unique_peak1-4723-8-0-3.00522241794757-2.70926996097583	chr3	104967785	104968321	+	0	NA	Intergenic	Intergenic	98291	NM_029228	75269	Mm.307994	NM_029228	ENSMUSG00000051788	4930564D02Rik	-	RIKEN cDNA 4930564D02 gene	protein-coding
common_peak2-19576-35-21-0.971938639825207-1.97718016252453	chr1	14307014	14308057	+	0	NA	Intergenic	Intergenic	-7255	NM_010164	14048	Mm.250185	NM_010164	ENSMUSG00000025932	Eya1	bor	eyes absent 1 homolog (Drosophila)	protein-coding
common_peak1-15344-15-15-0.0121647505556561-0.30803596071496	chr4	53439867	53440468	+	0	NA	Intergenic	Intergenic	-13118	NM_001159633	100434	Mm.482207	NM_133891	ENSMUSG00000028412	Slc44a1	2210409B22Rik|4833416H08Rik|AW547365|CHTL1|CTL1|Cdw92	solute carrier family 44, member 1	protein-coding
unique_peak2-35588-5-10--1.16381195464315-1.33892459842472	chr17	75273779	75274132	+	0	NA	Intergenic	MTC|LTR|MaLR	-130914	NM_019919	268977	Mm.269747	NM_019919	ENSMUSG00000001870	Ltbp1	9430031G15Rik|9830146M04|Ltbp-1|Tgfb|b2b1000Clo	latent transforming growth factor beta binding protein 1	protein-coding
unique_peak2-34278-1-8--2.79698201165906-2.05605744720049	chr13	68298120	68298557	+	0	NA	Intergenic	L1Md_T|LINE|L1	334075	NM_001001185	408058	Mm.177840	NM_001001185	ENSMUSG00000064063	BC048507	-	cDNA sequence BC048507	protein-coding
unique_peak2-34647-5-5--0.289342836727009-0.909929411522249	chr14	105732812	105733227	+	0	NA	Intergenic	Intergenic	75129	NM_001190989	76273	Mm.290669	NM_029561	ENSMUSG00000053253	Ndfip2	0710001O20Rik|2810436B12Rik|9130207N19Rik|N4wbp5a|mKIAA1165	Nedd4 family interacting protein 2	protein-coding
common_peak1-9169-22-40--0.710267899530679-1.05951140195658	chr11	78176382	78177527	+	0	NA	intron (NM_008238, intron 6 of 8)	intron (NM_008238, intron 6 of 8)	19930	NM_011676	22248	Mm.284811	NM_011676	ENSMUSG00000002058	Unc119	D11Bhm52|HRG4|MRG4|Rg4|Rtg4|Unc119h	unc-119 homolog (C. elegans)	protein-coding
unique_peak1-251-14-2-2.31425365963649-3.28500101358144	chr1	91613046	91613828	+	0	NA	intron (NM_001037136, intron 9 of 16)	intron (NM_001037136, intron 9 of 16)	-32970	NR_015540	74403	Mm.444291	NR_015540		4933400F21Rik	1700091C04Rik|4930565K10Rik	RIKEN cDNA 4933400F21 gene	ncRNA
unique_peak2-39728-5-8--0.874305337448166-1.10484139239135	chr9	121794321	121794824	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-12901	NM_001276719	59289	Mm.258105	NM_021609	ENSMUSG00000044534	Ackr2	AI464239|CCR10|CCR9|Ccbp2|Cmkbr9|D6	atypical chemokine receptor 2	protein-coding
unique_peak2-35673-7-20--1.59322659248057-1.71830443967823	chr18	11914898	11915716	+	0	NA	Intergenic	Intergenic	-82476	NM_022021	63955	Mm.40717	NM_022021	ENSMUSG00000040957	Cables1	Cables|ik3-1	CDK5 and Abl enzyme substrate 1	protein-coding
common_peak2-22926-8-7-0.00522241794757061-1.00793137938329	chr14	46790421	46790851	+	0	NA	Intergenic	Intergenic	86934	NR_002875	218963	Mm.282093	NR_002875		Gm1821	-	ubiquitin pseudogene	pseudo
common_peak1-7752-91-59-1.16654134999382-6.9426409817248	chr1	91040916	91043489	+	0	NA	exon (NM_133816, exon 4 of 6)	exon (NM_133816, exon 4 of 6)	47925	NR_106129	102465771		NR_106129		Mir7669	mmu-mir-7669	microRNA mir-7669	ncRNA
common_peak2-23265-9-8-0.0196884049619079-1.03275496310833	chr15	25636322	25636712	+	0	NA	intron (NM_019472, intron 3 of 40)	intron (NM_019472, intron 3 of 40)	84212	NM_019472	17909	Mm.60590	NM_019472	ENSMUSG00000022272	Myo10	AW048724|D15Ertd600e|mKIAA0799	myosin X	protein-coding
common_peak1-15927-18-28--0.54506184389922-0.591915184368642	chr5	24750761	24751577	+	0	NA	intron (NM_144908, intron 1 of 11)	MT2C_Mm|LTR|ERVL	22458	NM_144908	231050	Mm.246718	NM_144908	ENSMUSG00000038072	Galnt11	A430075I06Rik|AI648252|E430002F06Rik	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11	protein-coding
common_peak2-30587-38-38-0.286050440436282-0.554098881286537	chr7	80687987	80688934	+	0	NA	non-coding (NR_037569, exon 5 of 5)	non-coding (NR_037569, exon 5 of 5)	-1828	NM_001081345	244059	Mm.34539	NM_001081345	ENSMUSG00000078671	Chd2	2810013C04Rik|2810040A01Rik|5630401D06Rik|AI851092|BC029703|CHD-2	chromodomain helicase DNA binding protein 2	protein-coding
common_peak2-31682-11-6-0.701338662194009-1.32595962126035	chr8	126909204	126909577	+	0	NA	intron (NM_171824, intron 1 of 6)	Tigger5|DNA|MER2_type	48446	NM_171824	209966	Mm.234233	NM_171824	ENSMUSG00000050751	Pgbd5	2900019M05Rik|AI854313	piggyBac transposable element derived 5	protein-coding
common_peak1-17346-18-14-0.406028555619833-0.532159081577619	chr7	66060197	66061131	+	0	NA	intron (NM_009728, intron 12 of 20)	MIRb|SINE|MIR	147092	NM_009728	11982	Mm.135129	NM_009728	ENSMUSG00000025324	Atp10a	Atp10c|pfatp	ATPase, class V, type 10A	protein-coding
common_peak1-10524-22-38--0.638118113774844-0.887741995158868	chr14	8213958	8214747	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-30635	NR_015568	68308	Mm.390669	NR_015568	ENSMUSG00000090585	4933406F09Rik	1700007H14Rik|4930429F21Rik|4930570O04Rik|Gm3768	RIKEN cDNA 4933406F09 gene	ncRNA
unique_peak1-2021-8-2-1.42025991722641-1.65811743852845	chr15	10673187	10673709	+	0	NA	intron (NR_045063, intron 2 of 6)	LTRIS_Mus|LTR|ERV1	28793	NR_045065	75259	Mm.33928	NR_045063	ENSMUSG00000097058	4930556M19Rik	1700009D01Rik|C130022M03Rik	RIKEN cDNA 4930556M19 gene	ncRNA
unique_peak1-4047-10-3-1.35641534500877-1.75805390616669	chr2	59653336	59653831	+	0	NA	exon (NM_198294, exon 17 of 27)	exon (NM_198294, exon 17 of 27)	67080	NM_001159636	72137	Mm.288734	NM_028118	ENSMUSG00000026988	Wdsub1	1700048E19Rik|2610014F08Rik	WD repeat, SAM and U-box domain containing 1	protein-coding
unique_peak2-33358-1-6--2.43441193227435-1.56314192529759	chr11	31820443	31820851	+	0	NA	intron (NM_001290678, intron 3 of 7)	intron (NM_001290678, intron 3 of 7)	-44986	NM_026262	67592	Mm.78654	NM_026262	ENSMUSG00000020299	4930524B15Rik	-	RIKEN cDNA 4930524B15 gene	protein-coding
common_peak1-16197-26-14-1.02100849654994-1.59386218057211	chr5	92762395	92763567	+	0	NA	intron (NM_181728, intron 2 of 9)	B2_Mm1t|SINE|B2	2114	NM_181728	109979	Mm.263514	NM_181728	ENSMUSG00000034842	Art3	4930569O04Rik|ARTC3	ADP-ribosyltransferase 3	protein-coding
common_peak2-31603-5-5--0.289342836727009-0.909929411522249	chr8	122375887	122376232	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-10146	NM_146219	234796	Mm.86446	NM_146219	ENSMUSG00000031828	Klhl36	-	kelch-like 36	protein-coding
unique_peak1-838-9-3-1.18961340640422-1.57096726280955	chr11	8711100	8711681	+	0	NA	Intergenic	Intergenic	-146852	NM_001083587	319939	Mm.337820	NM_001083587	ENSMUSG00000020422	Tns3	BC023928|F830010I22Rik|TEM6|Tens1	tensin 3	protein-coding
common_peak2-28112-10-12--0.344024373132323-0.340565874754526	chr4	89048311	89048969	+	0	NA	Intergenic	Intergenic	-91699	NM_007670	12579	Mm.423094	NM_007670	ENSMUSG00000073802	Cdkn2b	AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b	cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)	protein-coding
common_peak1-14442-41-55--0.106206217208944-0.319297110585551	chr2	181580519	181582277	+	0	NA	intron (NM_153594, intron 5 of 6)	intron (NM_153594, intron 5 of 6)	8839	NM_001291211	245867	Mm.491085	NM_153594	ENSMUSG00000027589	Pcmtd2	5330414D10Rik|AI314201	protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2	protein-coding
common_peak2-22589-41-50-0.028723362877165-0.309546119484978	chr13	70637267	70638194	+	0	NA	Intergenic	Intergenic	-74389	NR_045934	73584	Mm.442491	NR_045934		1700100L14Rik	-	RIKEN cDNA 1700100L14 gene	ncRNA
common_peak1-14948-17-24--0.425559851569687-0.427564438475253	chr3	103967539	103968374	+	0	NA	intron (NM_001159354, intron 1 of 20)	B4|SINE|B4	56373	NM_133853	99470	Mm.264849	NM_133853	ENSMUSG00000052539	Magi3	4732496O19Rik|6530407C02Rik|AA407180|AI120132|mKIAA1634	membrane associated guanylate kinase, WW and PDZ domain containing 3	protein-coding
common_peak2-23987-15-18--0.235762762887929-0.326591483156968	chr16	18234445	18235193	+	0	NA	intron (NM_172151, intron 1 of 10)	intron (NM_172151, intron 1 of 10)	410	NM_172151	27801	Mm.326263	NM_172151	ENSMUSG00000060166	Zdhhc8	D16H22S1738E|DHHC-8|E330009O14Rik|Op53c05|ZDHHCL1	zinc finger, DHHC domain containing 8	protein-coding
common_peak2-22679-22-17-0.477359103645092-0.633951497070961	chr13	98120107	98120858	+	0	NA	Intergenic	Intergenic	-84443	NR_110432	100039691	Mm.219358	NR_110430		Lincenc1	ENSMUSG00000078952|Gm11019|Gm2373|linc-Enc1	long intergenic non-coding RNA, embryonic stem cells expressed 1	ncRNA
unique_peak2-38987-3-8--1.58390809140159-1.39487600375387	chr8	41963860	41964207	+	0	NA	intron (NM_001044740, intron 1 of 11)	intron (NM_001044740, intron 1 of 11)	16312	NM_001044740	11988	Mm.4676	NM_007514	ENSMUSG00000031596	Slc7a2	20.5|AI158848|Atrc2|CAT-2|Cat2|Tea	solute carrier family 7 (cationic amino acid transporter, y+ system), member 2	protein-coding
unique_peak1-6738-13-0-3.77847203063777-4.51544993495972	chr8	46483376	46484087	+	0	NA	exon (NM_126166, exon 6 of 7)	exon (NM_126166, exon 6 of 7)	12162	NM_126166	142980	Mm.33874	NM_126166	ENSMUSG00000031639	Tlr3	AI957183	toll-like receptor 3	protein-coding
common_peak1-11638-12-13--0.158578936969966-0.301029995663979	chr16	21423217	21423735	+	0	NA	intron (NM_001285894, intron 1 of 45)	CpG	285	NM_001285894	209018	Mm.235683	NM_145948	ENSMUSG00000033653	Vps8	AI315068|AU040738|mKIAA0804	vacuolar protein sorting 8 homolog (S. cerevisiae)	protein-coding
common_peak2-30832-9-7-0.18961340640422-1.05908390183068	chr7	131410769	131411199	+	0	NA	intron (NM_001252072, intron 1 of 1)	intron (NM_001252072, intron 1 of 1)	284289	NM_001252072	628779	Mm.40210	NM_001252072	ENSMUSG00000078591	Hs3st4	EG628779|Gm6915	heparan sulfate (glucosamine) 3-O-sulfotransferase 4	protein-coding
common_peak1-11577-9-9--0.132314688483142-1.03275496310833	chr16	14158725	14159232	+	0	NA	promoter-TSS (NR_030252)	promoter-TSS (NR_030252)	389	NM_001081154	223989	Mm.85442	NM_001081154	ENSMUSG00000060657	Marf1	4921513D23Rik|BC031575|C87306|E030019O05|Lkap|mKIAA0430	meiosis arrest female 1	protein-coding
common_peak1-11147-19-22--0.120874629395327-0.306080386793804	chr15	73645162	73645834	+	0	NA	intron (NM_001033365, intron 2 of 10)	L1MA4|LINE|L1	24603	NM_001033365	268816	Mm.440635	NM_001033365	ENSMUSG00000072487	Mroh5	Gm628	maestro heat-like repeat family member 5	protein-coding
common_peak2-29553-9-5-0.604650905683064-1.21398586181642	chr6	41524283	41524595	+	0	NA	Intergenic	Intergenic	-31042	NM_001146351	13848	Mm.271976	NM_007680	ENSMUSG00000029869	Ephb6	Cekl|Mep	Eph receptor B6	protein-coding
common_peak1-15642-25-23-0.27688740462395-0.451698068655807	chr4	134853393	134854189	+	0	NA	Intergenic	Intergenic	-25116	NM_013885	29876	Mm.257765	NM_013885	ENSMUSG00000037242	Clic4	D0Jmb3|TU-74|mc3s5|mtCLIC	chloride intracellular channel 4 (mitochondrial)	protein-coding
common_peak1-19127-8-7-0.00522241794757061-1.00793137938329	chr9	78212114	78212663	+	0	NA	Intergenic	Intergenic	3618	NM_025274	434423	Mm.139314	NM_025274	ENSMUSG00000060461	Dppa5a	AA536857|Dppa5|Esg1|ecat2	developmental pluripotency associated 5A	protein-coding
common_peak1-11960-21-36--0.639964100362715-0.825714541185117	chr17	6430152	6431054	+	0	NA	intron (NM_009342, intron 1 of 4)	intron (NM_009342, intron 1 of 4)	1343	NM_009342	21648	Mm.1948	NM_009342	ENSMUSG00000096255	Dynlt1b	AGS2|Dynlt1|Tctex-1|Tctex1	dynein light chain Tctex-type 1B	protein-coding
unique_peak2-39908-6-10--0.894033508256995-1.21398586181642	chrX	96130594	96131194	+	0	NA	Intergenic	Intergenic	-2226	NM_207633	77929	Mm.212290	NM_207633	ENSMUSG00000047694	Yipf6	A430107J06Rik	Yip1 domain family, member 6	protein-coding
unique_peak2-32779-5-13--1.51173525806346-1.78669045979184	chr1	179053569	179053967	+	0	NA	intron (NM_011785, intron 2 of 12)	Lx|LINE|L1	125130	NM_011785	23797	Mm.235194	NM_011785	ENSMUSG00000019699	Akt3	AI851531|D930002M15Rik|Nmf350	thymoma viral proto-oncogene 3	protein-coding
common_peak2-21073-33-47--0.253624938195627-0.423463616707761	chr11	49711954	49712824	+	0	NA	Intergenic	Intergenic	-2948	NM_029004	74563	Mm.258798	NM_029004	ENSMUSG00000020374	Rasgef1c	9130006A14Rik	RasGEF domain family, member 1C	protein-coding
common_peak1-19340-22-44--0.84456899124227-1.45193041780123	chrX	7573494	7574264	+	0	NA	Intergenic	L1_Rod|LINE|L1	21739	NM_027227	69824	Mm.279756	NM_027227	ENSMUSG00000031163	Glod5	2010001H14Rik|AV061890	glyoxalase domain containing 5	protein-coding
common_peak1-14000-9-5-0.604650905683064-1.21398586181642	chr2	104706822	104707293	+	0	NA	Intergenic	(TAAA)n|Simple_repeat|Simple_repeat	-17050	NM_178695	228413	Mm.259609	NM_178695	ENSMUSG00000027171	Prrg4	9930111I18Rik|TMG4	proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	protein-coding
unique_peak1-4806-18-5-1.7279566505072-2.39372960542229	chr3	137610647	137611396	+	0	NA	intron (NM_011932, intron 4 of 8)	intron (NM_011932, intron 4 of 8)	29502	NM_019920	56692	Mm.331392	NM_019920	ENSMUSG00000091512	Lamtor3	AW556229|Map2k1ip1|Mapbp|Mapksp1|Mp1	late endosomal/lysosomal adaptor, MAPK and MTOR activator 3	protein-coding
unique_peak1-2073-7-0-2.79909083029819-2.40823996531185	chr15	36605785	36606053	+	0	NA	Intergenic	L1Md_A|LINE|L1	-67191	NM_008774	18458	Mm.371570	NM_008774	ENSMUSG00000022283	Pabpc1	PABP|Pabp1|PabpI|Pabpl1|ePAB	poly(A) binding protein, cytoplasmic 1	protein-coding
unique_peak1-6147-16-13-0.310908720210457-0.417187467413082	chr6	135318694	135319478	+	0	NA	intron (NM_001288627, intron 1 of 4)	(CA)n|Simple_repeat|Simple_repeat	1575	NM_001288627	13730	Mm.182785	NM_010128	ENSMUSG00000030208	Emp1	I-8-09|TMP	epithelial membrane protein 1	protein-coding
common_peak2-28105-9-9--0.132314688483142-1.03275496310833	chr4	88935305	88935824	+	0	NA	intron (NM_009877, intron 1 of 2)	intron (NM_009877, intron 1 of 2)	4959	NM_009877	12578	Mm.4733	NM_009877	ENSMUSG00000044303	Cdkn2a	ARF-INK4a|Arf|INK4a-ARF|Ink4a/Arf|MTS1|Pctr1|p16|p16(INK4a)|p16INK4a|p19<ARF>|p19ARF	cyclin-dependent kinase inhibitor 2A	protein-coding
unique_peak2-34197-5-9--1.02630843089322-1.21398586181642	chr13	38310135	38310658	+	0	NA	intron (NM_026382, intron 6 of 8)	intron (NM_026382, intron 6 of 8)	13588	NM_026382	67797	Mm.250783	NM_026382	ENSMUSG00000021431	Snrnp48	1110050F08Rik|6530403A03Rik|C6orf151	small nuclear ribonucleoprotein 48 (U11/U12)	protein-coding
unique_peak1-6394-13-4-1.45654393575041-2.23384849113406	chr7	79270851	79271584	+	0	NA	intron (NM_001024703, intron 18 of 22)	intron (NM_001024703, intron 18 of 22)	180264	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding
unique_peak2-36526-2-5--1.50241675698448-1.08602067057793	chr2	163535966	163536321	+	0	NA	intron (NM_001164053, intron 2 of 3)	MLT1F1|LTR|MaLR	16370	NM_011106	18769	Mm.10091	NM_011106	ENSMUSG00000035268	Pkig	PKIgamma	protein kinase inhibitor, gamma	protein-coding
common_peak2-23299-22-28--0.210696890040167-0.337923771396236	chr15	34442424	34443275	+	0	NA	exon (NM_152894, exon 12 of 17)	exon (NM_152894, exon 12 of 17)	17783	NM_152894	67724	Mm.248779	NM_026340	ENSMUSG00000022325	Pop1	4932434G09Rik	processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae)	protein-coding
common_peak1-11482-28-14-1.14606852421294-2.01759298435799	chr15	102102901	102103630	+	0	NA	Intergenic	L1MC4|LINE|L1	-6622	NM_134100	106073	Mm.287740	NM_134100	ENSMUSG00000045665	Mfsd5	AA409375|AW556797|D15Mgi27	major facilitator superfamily domain containing 5	protein-coding
common_peak2-32233-10-11--0.228547155712387-0.31137425193576	chr9	123529810	123530330	+	0	NA	intron (NM_011731, intron 1 of 10)	RLTR22_Mur|LTR|ERVK	11613	NM_011731	22599	Mm.41963	NM_011731	ENSMUSG00000025243	Slc6a20b	AA986306|Sit1|Slc6a20|XT3|Xtrp3	solute carrier family 6 (neurotransmitter transporter), member 20B	protein-coding
unique_peak1-6743-18-7-1.31291915122835-1.71830443967823	chr8	46829405	46830358	+	0	NA	intron (NR_045739, intron 2 of 5)	intron (NR_045739, intron 2 of 5)	74770	NR_045739	319940	Mm.441720	NR_045739	ENSMUSG00000085440	Sorbs2os	D330022K07Rik	sorbin and SH3 domain containing 2, opposite strand	ncRNA
unique_peak2-35452-6-8--0.60452689106201-1.03789460276074	chr17	35865643	35866099	+	0	NA	Intergenic	Intergenic	-24787	NM_172962	12305	Mm.5021	NM_007584	ENSMUSG00000003534	Ddr1	6030432F18|AI323681|CD167a|Cak|Nep|PTK3A	discoidin domain receptor family, member 1	protein-coding
common_peak2-24699-29-30-0.158093770228236-0.384630725886669	chr17	45572517	45573404	+	0	NA	Intergenic	Intergenic	-2304	NM_152810	71702	Mm.28270	NM_152810	ENSMUSG00000023932	Cdc5l	1200002I02Rik|AA408004|PCDC5RP	cell division cycle 5-like (S. pombe)	protein-coding
common_peak2-26272-29-45--0.411271875441902-0.573175361577109	chr2	30711543	30712741	+	0	NA	intron (NM_009116, intron 1 of 3)	intron (NM_009116, intron 1 of 3)	11255	NM_009116	20204	Mm.1802	NM_009116	ENSMUSG00000039476	Prrx2	Prx2|S8	paired related homeobox 2	protein-coding
common_peak2-29160-15-16--0.075298090694683-0.301029995663976	chr5	130029206	130029749	+	0	NA	intron (NM_172276, intron 7 of 17)	RSINE1|SINE|B4	22371	NM_172276	231769	Mm.288714	NM_172276	ENSMUSG00000029439	Sfswap	1190005N23Rik|6330437E22Rik|AI197402|AW212079|SWAP|Sfrs8|Srsf8	splicing factor, suppressor of white-apricot homolog (Drosophila)	protein-coding
common_peak1-16293-19-22--0.120874629395327-0.306080386793804	chr5	113156138	113157020	+	0	NA	intron (NM_028901, intron 39 of 43)	intron (NM_028901, intron 39 of 43)	-65733	NR_040675	67360	Mm.59218	NR_040675	ENSMUSG00000098230	1700095B10Rik	-	RIKEN cDNA 1700095B10 gene	ncRNA
common_peak1-7470-54-96--0.426827080557394-1.04808805211778	chr1	166001329	166002916	+	0	NA	intron (NM_011346, intron 6 of 8)	intron (NM_011346, intron 6 of 8)	9915	NM_001164059	20343	Mm.1461	NM_011346	ENSMUSG00000026581	Sell	AI528707|CD62L|L-selectin|LECAM-1|Lnhr|Ly-22|Ly-m22|Lyam-1|Lyam1	selectin, lymphocyte	protein-coding
unique_peak2-37944-5-7--0.704380336005853-1.01466476204226	chr5	148959733	148960191	+	0	NA	intron (NM_029920, intron 4 of 14)	RLTR10|LTR|ERVK	191066	NM_029920	77521	Mm.244177	NM_029920	ENSMUSG00000029651	Mtus2	5730592G18Rik|A730013O20Rik|AU067634|C130038G02Rik|Cazip|Gm763|mKIAA0774	microtubule associated tumor suppressor candidate 2	protein-coding
common_peak1-11156-22-12-0.946844386946312-1.31435121412491	chr15	75748523	75749527	+	0	NA	intron (NM_025412, intron 3 of 5)	intron (NM_025412, intron 3 of 5)	2965	NM_025412	66194	Mm.250599	NM_025412	ENSMUSG00000022571	Pycrl	1110058B13Rik|2700073G24Rik	pyrroline-5-carboxylate reductase-like	protein-coding
common_peak2-23071-22-20-0.254966682308644-0.421916810733237	chr14	73384535	73385292	+	0	NA	Intergenic	Intergenic	-40497	NR_027860	668489	Mm.158324	NR_027860		Gm9199	EG668489	glycine cleavage system protein H (aminomethyl carrier) pseudogene	pseudo
common_peak1-9218-22-27--0.160070816970199-0.317737750275047	chr11	83753313	83754243	+	0	NA	Intergenic	Intergenic	-1814	NM_030096	78394	Mm.280544	NM_030096	ENSMUSG00000020677	Ddx52	2700029C06Rik|ROK1	DEAD (Asp-Glu-Ala-Asp) box polypeptide 52	protein-coding
unique_peak1-3348-46-10-2.4385643246115-8.90534191416329	chr19	17349703	17351799	+	0	NA	Intergenic	L1_Mus3|LINE|L1	63244	NM_001136484	14537	Mm.244825	NM_010265	ENSMUSG00000038843	Gcnt1	5630400D21Rik|B130048E03|C2 GlcNAcT|C2GNT|IGnT	glucosaminyl (N-acetyl) transferase 1, core 2	protein-coding
common_peak1-13256-25-36--0.347603460283844-0.465043498729215	chr19	32485425	32486469	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	22241	NR_033198	67188	Mm.391160	NR_033198	ENSMUSG00000097787	2700046G09Rik	-	RIKEN cDNA 2700046G09 gene	ncRNA
unique_peak1-1317-10-6-0.549060422951165-1.21398586181642	chr12	3423229	3423778	+	0	NA	intron (NR_030694, intron 1 of 2)	Lx8|LINE|L1	3244	NR_030694	100043040	Mm.415417	NR_030694	ENSMUSG00000071456	1110002L01Rik	-	RIKEN cDNA 1110002L01 gene	ncRNA
common_peak2-25231-19-10-0.943255708024389-1.16735254179725	chr18	63901536	63902121	+	0	NA	intron (NM_001014981, intron 12 of 27)	B1_Mur2|SINE|Alu	33479	NM_001014981	104082	Mm.30850	NM_001014981	ENSMUSG00000040560	Wdr7	AI462727|TRAG|mKIAA0541	WD repeat domain 7	protein-coding
common_peak1-15658-16-10-0.658832023630764-0.699649909729472	chr4	135962713	135963563	+	0	NA	Intergenic	Intergenic	-16301	NM_001285482	15552	Mm.40573	NM_008309	ENSMUSG00000070687	Htr1d	5-HT-1D|5-HT1D|AI853647|Gpcr14|Htr1db	5-hydroxytryptamine (serotonin) receptor 1D	protein-coding
unique_peak1-3251-11-1-2.50869358425161-2.83420869758413	chr18	65061287	65061865	+	0	NA	intron (NM_001114386, intron 1 of 30)	intron (NM_001114386, intron 1 of 30)	14166	NM_001114386	83814	Mm.98668	NM_031881	ENSMUSG00000024589	Nedd4l	1300012C07Rik|Nedd4-2|Nedd4b	neural precursor cell expressed, developmentally down-regulated gene 4-like	protein-coding
unique_peak1-1131-9-5-0.604650905683064-1.21398586181642	chr11	95805489	95806127	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	18889	NR_037223	100526468		NR_037223	miRBase:MI0014025	Mir3063	mmu-mir-3063	microRNA 3063	ncRNA
unique_peak1-1995-7-0-2.79909083029819-2.40823996531185	chr15	78609986	78610537	+	0	NA	intron (NM_130859, intron 16 of 20)	intron (NM_130859, intron 16 of 20)	-6386	NM_008595	17305	Mm.149235	NM_008595	ENSMUSG00000018169	Mfng	AW546563	MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase	protein-coding
unique_peak1-5639-10-0-3.35641534500877-3.31132995230379	chr6	22421459	22421957	+	0	NA	Intergenic	Intergenic	-115627	NM_138587	27999	Mm.490307	NM_138587	ENSMUSG00000029672	Fam3c	D6Wsu176e|Ilei	family with sequence similarity 3, member C	protein-coding
unique_peak2-34533-8-19--1.31670567693979-1.30305656033811	chr14	55094749	55095467	+	0	NA	5' UTR (NM_080726, exon 1 of 5)	5' UTR (NM_080726, exon 1 of 5)	171	NM_080726	140743	Mm.274727	NM_080726	ENSMUSG00000022176	Rem2	AW411893	rad and gem related GTP binding protein 2	protein-coding
common_peak1-14395-33-69--0.797945454419438-1.9967981614991	chr2	172999899	173000978	+	0	NA	Intergenic	Intergenic	21864	NM_011044	18534	Mm.266867	NM_011044	ENSMUSG00000027513	Pck1	AI265463|PEPCK|Pck-1	phosphoenolpyruvate carboxykinase 1, cytosolic	protein-coding
unique_peak2-36342-6-10--0.894033508256995-1.21398586181642	chr2	92374765	92375208	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-57377	NR_106080	102466819		NR_106080	miRBase:MI0023716	Mir7221	mmu-mir-7221	microRNA mir-7221	ncRNA
common_peak2-25505-8-10--0.454209200689727-1.078512453669	chr19	5457083	5457538	+	0	NA	exon (NM_198616, exon 1 of 1)	exon (NM_198616, exon 1 of 1)	253	NM_198616	240514	Mm.329657	NM_198616		Ccdc85b	AI842788|BB115872	coiled-coil domain containing 85B	protein-coding
unique_peak1-519-29-5-2.52732757989395-5.79706174304447	chr1	184016241	184017205	+	0	NA	Intergenic	Intergenic	-38145	NM_012058	27058	Mm.303071	NM_012058	ENSMUSG00000026511	Srp9	9kDa	signal recognition particle 9	protein-coding
unique_peak1-1842-22-3-2.6472841050874-4.58930897763324	chr14	46083929	46084674	+	0	NA	intron (NM_146054, intron 12 of 14)	intron (NM_146054, intron 12 of 14)	65439	NM_146054	218952	Mm.210018	NM_146054	ENSMUSG00000037712	Fermt2	AA960555|Kindlin-2|Mig2|Plekhc1	fermitin family homolog 2 (Drosophila)	protein-coding
unique_peak2-35385-6-11--1.01956439034085-1.32595962126035	chr17	29491795	29492275	+	0	NA	Intergenic	Intergenic	-5824	NM_013710	26382	Mm.279187	NM_013710	ENSMUSG00000024013	Fgd2	Tcd-2|Tcd2|ZFYVE4|tcs-2|tcs2	FYVE, RhoGEF and PH domain containing 2	protein-coding
common_peak2-25835-153-171-0.54875355141865-3.69001391589258	chr19	41263064	41264902	+	0	NA	intron (NM_011904, intron 1 of 20)	intron (NM_011904, intron 1 of 20)	17281	NM_011904	24087	Mm.89983	NM_011904	ENSMUSG00000025013	Tll2	-	tolloid-like 2	protein-coding
unique_peak1-1206-23-11-1.13680500378792-1.66030262873422	chr11	105949561	105950662	+	0	NA	intron (NM_011947, intron 1 of 15)	intron (NM_011947, intron 1 of 15)	3895	NM_011947	26406	Mm.27041	NM_011947	ENSMUSG00000020700	Map3k3	AW548911|MAPKKK3|Mekk3|mKIAA4031	mitogen-activated protein kinase kinase kinase 3	protein-coding
unique_peak1-694-12-3-1.64877598508764-2.36932189928148	chr10	80069822	80070350	+	0	NA	exon (NM_001100606, exon 2 of 2)	exon (NM_001100606, exon 2 of 2)	-1919	NR_105877	102465550		NR_105877		Mir6912	mmu-mir-6912	microRNA mir-6912	ncRNA
common_peak2-21102-84-118-0.0401162955810817-0.315507148676085	chr11	51999706	52001034	+	0	NA	Intergenic	Intergenic	27119	NM_207253	276865	Mm.377871	NM_207253	ENSMUSG00000060170	Olfr1371	GA_x6K02T2QP88-3214035-3214970|MOR256-58	olfactory receptor 1371	protein-coding
unique_peak1-6809-14-5-1.31425365963649-1.4372489031793	chr8	72208388	72209038	+	0	NA	Intergenic	MMETn-int|LTR|ERVK	30258	NM_001177527	636741	Mm.480188	NM_001177527	ENSMUSG00000091764	Zfp964	4732490P12|EG636741|Gm7187	zinc finger protein 964	protein-coding
common_peak2-22148-14-17--0.270708841084668-0.328191099940267	chr12	86786836	86787639	+	0	NA	Intergenic	B3A|SINE|B2	-27614	NM_010234	14281	Mm.246513	NM_010234	ENSMUSG00000021250	Fos	D12Rfj1|c-fos|cFos	FBJ osteosarcoma oncogene	protein-coding
unique_peak2-37760-5-8--0.874305337448166-1.10484139239135	chr5	114690585	114691025	+	0	NA	intron (NM_133904, intron 43 of 51)	intron (NM_133904, intron 43 of 51)	32965	NM_148935	116810	Mm.17709	NM_148935	ENSMUSG00000042002	Foxn4	-	forkhead box N4	protein-coding
common_peak2-26784-4-6--0.830815435910851-0.989110657569874	chr2	145785962	145786213	+	0	NA	intron (NM_175280, intron 6 of 6)	ORR1C2|LTR|MaLR	25567	NM_175280	78774	Mm.136347	NM_175280	ENSMUSG00000037143	Cfap61	4930529M08Rik|BB178539|BC024760	cilia and flagella associated protein 61	protein-coding
common_peak2-21849-17-19--0.103631756682325-0.301029995663974	chr11	121260003	121260628	+	0	NA	Intergenic	MMERVK10C-int|LTR|ERVK	-10750	NM_139147	217371	Mm.281639	NM_139147	ENSMUSG00000025170	Rab40b	SEC4L|rar	Rab40B, member RAS oncogene family	protein-coding
common_peak1-8197-10-15--0.643584654991231-0.519648556297791	chr10	128909216	128909785	+	0	NA	promoter-TSS (NM_146551)	promoter-TSS (NM_146551)	-250	NM_146551	258544	Mm.377560	NM_146551	ENSMUSG00000049217	Olfr788	MOR111-4	olfactory receptor 788	protein-coding
unique_peak1-1167-8-4-0.683294323060208-1.21878474469819	chr11	99200403	99200924	+	0	NA	Intergenic	B1F2|SINE|Alu	-1384	NM_001033397	320864	Mm.440509	NM_001033397	ENSMUSG00000075570	Krt26	4732407F15Rik|Krt25b	keratin 26	protein-coding
common_peak2-22223-7-5-0.214128329577033-1.01466476204226	chr12	113155195	113155629	+	0	NA	Intergenic	Intergenic	-9146	NM_011625	21981	Mm.313076	NM_011625	ENSMUSG00000021285	Ppp1r13b	AI449786|ASPP1|AW545810|Tp53bp2|Trp53bp2|p85	protein phosphatase 1, regulatory (inhibitor) subunit 13B	protein-coding
unique_peak1-1144-12-3-1.64877598508764-2.36932189928148	chr11	97438977	97439417	+	0	NA	Intergenic	Intergenic	-2757	NM_018873	56013	Mm.342665	NM_018873	ENSMUSG00000038453	Srcin1	P140|SNIP|mKIAA1684|p140Cap	SRC kinase signaling inhibitor 1	protein-coding
unique_peak1-37-24-10-1.33377828413042-2.22881803703862	chr1	14304358	14305471	+	0	NA	Intergenic	Intergenic	-4634	NM_010164	14048	Mm.250185	NM_010164	ENSMUSG00000025932	Eya1	bor	eyes absent 1 homolog (Drosophila)	protein-coding
unique_peak2-39382-6-7--0.434601889619698-0.97990265578305	chr9	21367964	21368461	+	0	NA	intron (NM_153141, intron 1 of 14)	URR1B|DNA|MER1_type	16874	NM_153141	59035	Mm.178115	NM_021531	ENSMUSG00000032185	Carm1	Prmt4	coactivator-associated arginine methyltransferase 1	protein-coding
unique_peak2-38750-2-6--1.72480917832092-1.26211192963361	chr7	116442222	116442560	+	0	NA	intron (NM_054103, intron 13 of 13)	L1MA6|LINE|L1	-128569	NM_057173	109594	Mm.360145	NM_057173	ENSMUSG00000036111	Lmo1	Rbtn-1|Rbtn1|Ttg1	LIM domain only 1	protein-coding
unique_peak2-36928-4-9--1.34538860874061-1.36011389749466	chr3	102103542	102104083	+	0	NA	Intergenic	LTR48|LTR|ERV1	37484	NR_040391	319951	Mm.225196	NR_040391		A230001M10Rik	-	RIKEN cDNA A230001M10 gene	ncRNA
common_peak1-13270-206-170-1.07478493862329-15.4259337196858	chr19	36832760	36835834	+	0	NA	Intergenic	Intergenic	-23203	NM_016854	53412	Mm.24724	NM_016854	ENSMUSG00000067279	Ppp1r3c	PTG|Ppp1r5	protein phosphatase 1, regulatory (inhibitor) subunit 3C	protein-coding
common_peak1-10224-26-26-0.173011589994994-0.363124929330838	chr13	51645031	51646242	+	0	NA	intron (NM_009167, intron 1 of 11)	intron (NM_009167, intron 1 of 11)	16817	NM_009167	20418	Mm.131870	NM_009167	ENSMUSG00000021448	Shc3	N-Shc|Rai|ShcC	src homology 2 domain-containing transforming protein C3	protein-coding
unique_peak1-3642-10-5-0.771452844287613-1.33892459842472	chr19	38093232	38093708	+	0	NA	intron (NM_001099634, intron 3 of 52)	MTA_Mm|LTR|MaLR	24597	NM_001099634	226101	Mm.34674	NM_177035	ENSMUSG00000048612	Myof	2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3	myoferlin	protein-coding
common_peak2-21301-85-115-0.0974222529970792-0.374641233533041	chr11	72795179	72796986	+	0	NA	intron (NM_001163336, intron 15 of 20)	intron (NM_001163336, intron 15 of 20)	-16565	NM_008771	18436	Mm.25722	NM_008771	ENSMUSG00000020787	P2rx1	AI323649|BB122383|P2x|Pdcd3|RP-2	purinergic receptor P2X, ligand-gated ion channel, 1	protein-coding
unique_peak2-39308-4-5--0.608423014574403-0.909929411522249	chr8	124316555	124316974	+	0	NA	Intergenic	Intergenic	36705	NM_145605	234825	Mm.209329	NM_145605	ENSMUSG00000040263	Klhdc4	AA408426|AV352552|BC012312|G430025P05Rik	kelch domain containing 4	protein-coding
unique_peak1-3312-8-2-1.42025991722641-1.65811743852845	chr18	78313881	78314331	+	0	NA	intron (NM_001171011, intron 1 of 8)	intron (NM_001171011, intron 1 of 8)	6059	NM_001171010	108052	Mm.33832	NM_028122	ENSMUSG00000059336	Slc14a1	2610507K20Rik|3021401A05Rik|UT-B|Utb1	solute carrier family 14 (urea transporter), member 1	protein-coding
common_peak1-14266-60-76-0.0875053209256302-0.350518480579152	chr2	156110994	156112445	+	0	NA	intron (NM_172674, intron 9 of 17)	B3|SINE|B2	-26490	NM_027585	70873	Mm.475234	NM_027585	ENSMUSG00000038085	Cnbd2	4921517L17Rik|5430421B09Rik|Cris	cyclic nucleotide binding domain containing 2	protein-coding
common_peak2-30881-6-6--0.241956811677302-0.947717972411649	chr7	141268748	141269166	+	0	NA	intron (NM_007400, intron 3 of 22)	ID_B1|SINE|B4	147823	NM_007400	11489	Mm.439714	NM_007400	ENSMUSG00000054555	Adam12	Mltna|mKIAA4001	a disintegrin and metallopeptidase domain 12 (meltrin alpha)	protein-coding
common_peak1-19333-23-41--0.67054991826968-1.0364730969458	chrX	57392245	57393232	+	0	NA	intron (NM_001289731, intron 4 of 27)	MTE2b|LTR|MaLR	8139	NM_133197	109904	Mm.93796	NM_133197	ENSMUSG00000031139	Mcf2	B230117G22Rik|Dbl|Mcf-2	mcf.2 transforming sequence	protein-coding
common_peak1-7959-25-25-0.161410187204014-0.36542888694933	chr1	155076152	155076747	+	0	NA	intron (NM_010683, intron 22 of 27)	intron (NM_010683, intron 22 of 27)	-42872	NM_008485	16782	Mm.329272	NM_008485	ENSMUSG00000026479	Lamc2	AA589349	laminin, gamma 2	protein-coding
common_peak1-18046-7-8--0.370834171144123-1.00793137938329	chr7	144775352	144775863	+	0	NA	Intergenic	Intergenic	146250	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
unique_peak1-5359-14-7-0.899216160357645-0.947446088118041	chr5	92814356	92815015	+	0	NA	intron (NM_181728, intron 2 of 9)	B4A|SINE|B4	-22363	NR_038116	56066	Mm.131723	NM_019494	ENSMUSG00000060183	Cxcl11	Cxc11|H174|I-tac|Ip9|Itac|Scyb11|Scyb9b|b-R1|betaR1	chemokine (C-X-C motif) ligand 11	protein-coding
unique_peak2-38834-5-9--1.02630843089322-1.21398586181642	chr7	141506268	141506837	+	0	NA	intron (NM_001081331, intron 2 of 7)	Lx7|LINE|L1	50015	NM_001199941	71007	Mm.334285	NM_001081331	ENSMUSG00000030994	D7Ertd443e	4933400E14Rik|FATS|Gm497	DNA segment, Chr 7, ERATO Doi 443, expressed	protein-coding
common_peak1-16030-13-13--0.0288828914198356-0.309074325783021	chr5	36181646	36182345	+	0	NA	intron (NM_001177700, intron 10 of 16)	intron (NM_001177700, intron 10 of 16)	-53973	NM_027373	70292	Mm.125167	NM_027373	ENSMUSG00000029094	Afap1	2600003E23Rik|9630044L16Rik|AI848729|Afap|mKIAA3018	actin filament associated protein 1	protein-coding
unique_peak1-7272-9-4-0.867685311516858-1.36011389749466	chr9	96888924	96889436	+	0	NA	intron (NM_145134, intron 2 of 2)	intron (NM_145134, intron 2 of 2)	29594	NM_145134	211949	Mm.491271	NM_145134	ENSMUSG00000046997	Spsb4	D030068E18Rik|SSB-4|Ssb4	splA/ryanodine receptor domain and SOCS box containing 4	protein-coding
unique_peak2-39868-9-7-0.18961340640422-1.05908390183068	chrX	73745553	73746009	+	0	NA	Intergenic	MMETn-int|LTR|ERVK	102482	NM_001201395	74987	Mm.107996	NM_001201395	ENSMUSG00000079525	4930468A15Rik	-	RIKEN cDNA 4930468A15 gene	protein-coding
common_peak1-18172-41-41-0.3088312820699-0.584217371416963	chr8	13869273	13870446	+	0	NA	intron (NM_181854, intron 1 of 1)	CpG	218	NM_181854	101994	Mm.289346	NM_181854	ENSMUSG00000047710	Champ1	AA675043|AI116001|D8Ertd457e|D8Ertd569e|Zfp828|Znf828|mKIAA1802	chromosome alignment maintaining phosphoprotein 1	protein-coding
common_peak1-18619-49-17-1.83635882158287-6.61032311367524	chr8	108764216	108765769	+	0	NA	intron (NM_145404, intron 8 of 17)	intron (NM_145404, intron 8 of 17)	30038	NM_145404	214572	Mm.251804	NM_145404		Prmt7	4933402B05Rik|BC006705	protein arginine N-methyltransferase 7	protein-coding
common_peak1-8724-28-28-0.194978124693891-0.390124689062469	chr11	116489879	116490760	+	0	NA	Intergenic	Intergenic	-1986	NM_172572	217344	Mm.89695	NM_172572	ENSMUSG00000020806	Rhbdf2	4732465I17Rik|Rhbdl6	rhomboid 5 homolog 2 (Drosophila)	protein-coding
common_peak1-7710-14-15--0.100783839642355-0.301029995663982	chr1	87180114	87180676	+	0	NA	Intergenic	Intergenic	314990	NM_030194	109032	Mm.335802	NM_030194	ENSMUSG00000070034	Sp110	5031415C07Rik|52kDa|5830484A20Rik|ENSMUSG00000075603|Ifi75|Ipr1	Sp110 nuclear body protein	protein-coding
common_peak2-23388-13-13--0.0288828914198356-0.309074325783021	chr15	58256830	58257529	+	0	NA	intron (NM_145959, intron 6 of 23)	intron (NM_145959, intron 6 of 23)	10156	NM_145959	210998	Mm.3224	NM_145959	ENSMUSG00000037119	D15Ertd621e	AV220772|BC033609|Fam91a1|SKIN|mKIAA0493	DNA segment, Chr 15, ERATO Doi 621, expressed	protein-coding
common_peak2-26618-13-12-0.0780323124966764-0.334470287753051	chr2	117749062	117749656	+	0	NA	Intergenic	L1M1|LINE|L1	101695	NR_040631	73938	Mm.399107	NR_040631	ENSMUSG00000086221	4930412B13Rik	-	RIKEN cDNA 4930412B13 gene	ncRNA
common_peak2-21325-20-12-0.787635066450101-0.949240599462708	chr11	75551962	75552603	+	0	NA	intron (NM_009536, intron 1 of 5)	B1_Mm|SINE|Alu	5893	NM_009536	22627	Mm.234700	NM_009536	ENSMUSG00000020849	Ywhae	AU019196	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide	protein-coding
unique_peak2-36063-4-7--1.02346051385325-1.09384600808989	chr19	47891652	47892195	+	0	NA	intron (NM_027559, intron 5 of 37)	intron (NM_027559, intron 5 of 37)	19928	NM_027559	100048534	Mm.29457	NM_027559	ENSMUSG00000044948	Cfap43	4632415N18Rik|4930428C11Rik|4930463G05Rik|AI429486|D19Ertd652e|Wdr96	cilia and flagella associated protein 43	protein-coding
unique_peak1-596-10-6-0.549060422951165-1.21398586181642	chr10	18323900	18324512	+	0	NA	intron (NM_001033258, intron 26 of 33)	intron (NM_001033258, intron 26 of 33)	-58324	NM_019487	56016	Mm.35551	NM_019487	ENSMUSG00000019853	Hebp2	SOUL	heme binding protein 2	protein-coding
unique_peak1-214-20-2-2.90311228387004-4.53603905993749	chr1	87637073	87637981	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-4346	NM_177055	319997	Mm.116691	NM_177055	ENSMUSG00000052760	A630001G21Rik	-	RIKEN cDNA A630001G21 gene	protein-coding
common_peak2-19946-21-23--0.0154732354549205-0.305650498375555	chr1	131107550	131108308	+	0	NA	Intergenic	L1_Mus2|LINE|L1	-61952	NM_172485	210417	Mm.380518	NM_172485	ENSMUSG00000042581	Thsd7b	1700074E13Rik|B930082A18|D130067I03Rik	thrombospondin, type I, domain containing 7B	protein-coding
unique_peak1-7373-8-1-2.00522241794757-2.05605744720049	chrX	56640099	56640519	+	0	NA	intron (NM_001290414, intron 2 of 6)	intron (NM_001290414, intron 2 of 6)	198440	NM_001290414	14168	Mm.7995	NM_010200	ENSMUSG00000031137	Fgf13	Fhf2	fibroblast growth factor 13	protein-coding
common_peak1-17920-9-7-0.18961340640422-1.05908390183068	chr7	126625920	126626311	+	0	NA	Intergenic	Lx7|LINE|L1	-3339	NM_001278605	22242	Mm.10826	NM_009470	ENSMUSG00000030963	Umod	THP|Urehd1|urehr4	uromodulin	protein-coding
unique_peak2-37253-3-8--1.58390809140159-1.39487600375387	chr4	103313857	103314401	+	0	NA	Intergenic	Intergenic	259024	NR_040673	622167	Mm.244115	NR_040673	ENSMUSG00000086136	Gm12718	OTTMUSG00000008109	predicted gene 12718	ncRNA
common_peak2-27017-13-10-0.319040412000471-0.446472590016315	chr2	173271720	173272253	+	0	NA	Intergenic	Intergenic	-76107	NM_028158	72221	Mm.46132	NM_028158	ENSMUSG00000027518	1700021F07Rik	-	RIKEN cDNA 1700021F07 gene	protein-coding
common_peak2-20152-9-8-0.0196884049619079-1.03275496310833	chr1	168708836	168709249	+	0	NA	Intergenic	Lx4B|LINE|L1	-97066	NM_172844	240894	Mm.246610	NM_172844	ENSMUSG00000026560	Fmo9	4831428F09Rik	flavin containing monooxygenase 9	protein-coding
common_peak1-19425-17-11-0.633333837483882-0.769930178837768	chrX	75137655	75138223	+	0	NA	Intergenic	L1_Mus2|LINE|L1	27842	NM_001085544	628923	Mm.79600	NM_001085544	ENSMUSG00000079522	Gm14744	OTTMUSG00000017866|Obp1f	predicted gene 14744	protein-coding
common_peak1-16102-40-24-1.01511949297637-2.45983369815837	chr5	64969352	64970926	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	31799	NR_045078	100042198	Mm.25191	NR_045078		Gm3716	Gm1683	predicted gene 3716	ncRNA
common_peak1-13356-38-42-0.145187904596432-0.387953346623085	chr19	45074492	45075574	+	0	NA	intron (NM_011976, intron 14 of 14)	intron (NM_011976, intron 14 of 14)	5899	NM_053164	94067	Mm.44174	NM_053164	ENSMUSG00000025208	Mrpl43	4930442D21Rik|bMRP36a	mitochondrial ribosomal protein L43	protein-coding
common_peak2-29304-8-16--1.08224042330277-0.891319708951328	chr5	145167221	145167751	+	0	NA	Intergenic	Intergenic	48092	NR_102373	100579137		NR_102372		Dmr	-	Dmrt1 related	ncRNA
unique_peak2-33403-4-6--0.830815435910851-0.989110657569874	chr11	54214213	54214647	+	0	NA	intron (NM_029105, intron 9 of 13)	intron (NM_029105, intron 9 of 13)	30276	NM_029105	74847	Mm.486538	NM_029105	ENSMUSG00000020332	4930404A10Rik	-	RIKEN cDNA 4930404A10 gene	protein-coding
unique_peak2-39042-4-10--1.48289213249054-1.5150158574804	chr8	70131338	70131861	+	0	NA	Intergenic	Intergenic	83846	NM_008674	17962	Mm.57193	NM_008674	ENSMUSG00000056426	Nat3	-	N-acetyltransferase 3	protein-coding
common_peak2-19544-9-18--1.05831410703937-0.965105923112245	chr1	161070698	161071464	+	0	NA	Intergenic	Intergenic	-91376	NM_011931	26374	Mm.328135	NM_011931	ENSMUSG00000040782	Rfwd2	AI316802|C80879|Cop1	ring finger and WD repeat domain 2	protein-coding
unique_peak1-5567-11-0-3.50869358425161-3.61235994796777	chr5	146928970	146929452	+	0	NA	Intergenic	L1Md_F2|LINE|L1	38377	NM_001105160	100041449	Mm.301900	NM_001105160	ENSMUSG00000061292	Cyp3a59	ENSMUSG00000061292	cytochrome P450, family 3, subfamily a, polypeptide 59	protein-coding
unique_peak1-3053-14-9-0.577288065470282-0.630231561310125	chr18	5986033	5986883	+	0	NA	Intergenic	ORR1D2|LTR|MaLR	149638	NM_029277	75415	Mm.239675	NM_029277	ENSMUSG00000041225	Arhgap12	2810011M08Rik	Rho GTPase activating protein 12	protein-coding
common_peak2-25611-10-4-1.03448725012141-1.5150158574804	chr19	8954225	8954523	+	0	NA	TTS (NM_001160356)	TTS (NM_001160356)	1049	NM_001160356	107197	Mm.381181	NM_001160356	ENSMUSG00000071654	Uqcc3	AI462493|Cbp4	ubiquinol-cytochrome c reductase complex assembly factor 3	protein-coding
common_peak2-23984-17-33--0.869166503045301-1.12969433525548	chr16	18065914	18066797	+	0	NA	promoter-TSS (NM_001289814)	promoter-TSS (NM_001289814)	-141	NR_110380	13353	Mm.27155	NM_010047	ENSMUSG00000003531	Dgcr6	-	DiGeorge syndrome critical region gene 6	protein-coding
common_peak1-17753-8-8--0.164702583494742-1.00793137938329	chr7	84018219	84018727	+	0	NA	intron (NM_001199224, intron 21 of 22)	Charlie10a|DNA|MER1_type	643700	NM_001199224	244071	Mm.322829	NM_172902	ENSMUSG00000025754	Agbl1	Ccp4|D430020F16|EG244071|Nna1-l1	ATP/GTP binding protein-like 1	protein-coding
common_peak2-27230-24-29--0.113680692840802-0.304839791830752	chr3	51661963	51662953	+	0	NA	intron (NM_001004176, intron 1 of 4)	intron (NM_001004176, intron 1 of 4)	197343	NM_174995	211666	Mm.24679	NM_174995	ENSMUSG00000074604	Mgst2	GST2|MGST-II	microsomal glutathione S-transferase 2	protein-coding
common_peak1-7551-21-36--0.639964100362715-0.825714541185117	chr1	37996771	37997468	+	0	NA	Intergenic	Lx2B|LINE|L1	17485	NM_027111	69541	Mm.389117	NM_027111	ENSMUSG00000026085	Lyg1	2300002O18Rik	lysozyme G-like 1	protein-coding
common_peak2-29704-20-24--0.155781405183531-0.319918318021793	chr6	83109017	83109650	+	0	NA	intron (NM_027948, intron 1 of 3)	Lx7|LINE|L1	2935	NM_027948	71837	Mm.17621	NM_027948	ENSMUSG00000030030	1700003E16Rik	AU041756	RIKEN cDNA 1700003E16 gene	protein-coding
common_peak2-21092-29-16-1.02482723936477-1.87578206828671	chr11	51619769	51620316	+	0	NA	Intergenic	Intergenic	42877	NM_025535	66397	Mm.196592	NM_025535	ENSMUSG00000020386	Sar1b	2310075M17Rik|2900019I22Rik|CMRD|Sara1b|Sara2|Sarb	SAR1 gene homolog B (S. cerevisiae)	protein-coding
common_peak2-26793-97-81-0.826449066874198-4.29094862165307	chr2	148038210	148040332	+	0	NA	Intergenic	Lx4A|LINE|L1	-166566	NM_010446	15376	Mm.938	NM_010446	ENSMUSG00000037025	Foxa2	HNF3-beta|HNF3beta|Hnf-3b|Hnf3b|Tcf-3b|Tcf3b	forkhead box A2	protein-coding
common_peak2-28296-28-40--0.304592884796621-0.447010559430123	chr4	132270084	132270604	+	0	NA	intron (NM_210071, intron 15 of 16)	intron (NM_210071, intron 15 of 16)	18117	NM_201368	381560	Mm.44558	NM_201368	ENSMUSG00000037752	Xkr8	4931440N07Rik|AI597014|Gm1031|XRG8|mXkr8	X Kell blood group precursor related family member 8 homolog	protein-coding
common_peak1-18175-8-6-0.197867495889966-1.03789460276074	chr8	14759863	14760213	+	0	NA	intron (NM_172910, intron 7 of 15)	L1M3d|LINE|L1	-128498	NM_012000	26889	Mm.254027	NM_012000	ENSMUSG00000026317	Cln8	mnd	ceroid-lipofuscinosis, neuronal 8	protein-coding
unique_peak1-69-15-15-0.0121647505556561-0.30803596071496	chr1	36287260	36287985	+	0	NA	intron (NM_198899, intron 2 of 40)	intron (NM_198899, intron 2 of 40)	13525	NM_198899	320011	Mm.261022	NM_198899	ENSMUSG00000037470	Uggt1	0910001L17Rik|A930007H10Rik|AA589501|AI414429|AI448372|C820010P03Rik|GT|UGT1|Ugcgl1	UDP-glucose glycoprotein glucosyltransferase 1	protein-coding
common_peak1-11051-12-8-0.478850983645327-0.562038191119709	chr15	53675473	53676247	+	0	NA	intron (NM_177225, intron 2 of 4)	MLT1B|LTR|MaLR	58131	NM_177225	320679	Mm.442455	NM_177225	ENSMUSG00000058656	Samd12	A830094I09Rik	sterile alpha motif domain containing 12	protein-coding
common_peak2-21149-5-14--1.61127093161437-1.95509489018123	chr11	57719947	57720603	+	0	NA	Intergenic	Intergenic	-74626	NM_008213	15110	Mm.4746	NM_008213	ENSMUSG00000037335	Hand1	Ehand1|Hxt|Th1|Thing1|bHLHa27|eHAND	heart and neural crest derivatives expressed transcript 1	protein-coding
unique_peak1-1423-8-3-1.00522241794757-1.39487600375387	chr12	83579385	83579931	+	0	NA	Intergenic	B4A|SINE|B4	-138367	NM_015812	50779	Mm.153013	NM_015812	ENSMUSG00000021219	Rgs6	-	regulator of G-protein signaling 6	protein-coding
common_peak1-11252-28-23-0.467996619100306-0.690880484874617	chr15	80158257	80159311	+	0	NA	intron (NM_001044308, intron 4 of 36)	intron (NM_001044308, intron 4 of 36)	41116	NM_001044308	239556	Mm.291058	NM_001044308	ENSMUSG00000022416	Cacna1i	Ca(V)3.3	calcium channel, voltage-dependent, alpha 1I subunit	protein-coding
unique_peak2-37369-2-5--1.50241675698448-1.08602067057793	chr4	137367886	137368335	+	0	NA	Intergenic	Intergenic	-15811	NM_007431	11647	Mm.288186	NM_007431	ENSMUSG00000028766	Alpl	APTNAP|Akp-2|Akp2|TNAP|TNSALP	alkaline phosphatase, liver/bone/kidney	protein-coding
common_peak2-31562-30-69--0.959607607453093-2.5917804265315	chr8	117157303	117158709	+	0	NA	intron (NM_019573, intron 5 of 8)	URR1A|DNA|MER1_type	194454	NM_019573	80707	Mm.440420	NM_019573	ENSMUSG00000004637	Wwox	5330426P09Rik|9030416C10Rik|WOX1	WW domain-containing oxidoreductase	protein-coding
common_peak2-26882-16-20--0.274053780510699-0.353907621462756	chr2	156863106	156863677	+	0	NA	intron (NM_001164663, intron 5 of 14)	intron (NM_001164663, intron 5 of 14)	-30580	NM_025853	66934	Mm.25410	NM_025853	ENSMUSG00000027635	Dsn1	1700022L09Rik|AW552447	DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)	protein-coding
unique_peak1-7350-6-3-0.565398110380302-1.08602067057793	chrX	13241836	13242303	+	0	NA	intron (NM_175669, intron 2 of 3)	intron (NM_175669, intron 2 of 3)	3580	NM_175669	319200	Mm.383294	NM_175669	ENSMUSG00000047678	Gpr82	-	G protein-coupled receptor 82	protein-coding
common_peak2-23558-58-59-0.389059339281978-0.932664372754135	chr15	79323306	79324692	+	0	NA	intron (NM_008427, intron 1 of 1)	intron (NM_008427, intron 1 of 1)	11672	NM_008427	16520	Mm.140760	NM_008427	ENSMUSG00000044216	Kcnj4	IRK3|Kcnf2|MB-IRK3	potassium inwardly-rectifying channel, subfamily J, member 4	protein-coding
common_peak1-15845-10-6-0.549060422951165-1.21398586181642	chr5	3299687	3300314	+	0	NA	Intergenic	Intergenic	-44312	NM_009873	12571	Mm.31672	NM_009873	ENSMUSG00000040274	Cdk6	5830411I20|AI504062|Crk2	cyclin-dependent kinase 6	protein-coding
unique_peak1-5102-8-1-2.00522241794757-2.05605744720049	chr4	150779885	150780420	+	0	NA	intron (NM_001081557, intron 5 of 23)	L1MD|LINE|L1	-348090	NM_009498	22319	Mm.273930	NM_009498	ENSMUSG00000028955	Vamp3	D130027G05Rik|VAMP-3|ceb	vesicle-associated membrane protein 3	protein-coding
unique_peak2-32858-2-7--1.91745425626332-1.45399745587252	chr10	75316985	75317344	+	0	NA	Intergenic	Intergenic	5831	NM_010798	17319	Mm.2326	NM_010798	ENSMUSG00000033307	Mif	GIF|Glif	macrophage migration inhibitory factor	protein-coding
unique_peak2-38092-7-8--0.370834171144123-1.00793137938329	chr6	56902516	56903017	+	0	NA	Intergenic	L1Md_T|LINE|L1	-3741	NM_134176	171194	Mm.222754	NM_134176	ENSMUSG00000071893	Vmn1r4	C230065D10Rik|V1rc21	vomeronasal 1 receptor 4	protein-coding
common_peak2-30905-12-10-0.189344366450341-0.386243247519795	chr7	143517899	143518433	+	0	NA	Intergenic	Intergenic	22932	NR_040459	330664	Mm.127762	NR_040459		C230079O03Rik	C230079O03	RIKEN cDNA C230079O03 gene	ncRNA
common_peak1-9734-10-18--0.891512168434816-0.804350088532826	chr12	41024216	41024806	+	0	NA	Intergenic	RMER21B|LTR|ERV1	74560	NR_045157	629820	Mm.435540	NR_045157	ENSMUSG00000035983	Gm7008	EG629820	predicted gene 7008	ncRNA
unique_peak1-6053-10-5-0.771452844287613-1.33892459842472	chr6	115536943	115537409	+	0	NA	intron (NM_001101431, intron 2 of 3)	URR1A|DNA|MER1_type	5418	NM_001101431	70291	Mm.133694	NM_001101431		Mkrn2os	2510049J12Rik	makorin, ring finger protein 2, opposite strand	protein-coding
common_peak1-15914-26-20-0.535581669379702-0.738267116931592	chr5	23711962	23712648	+	0	NA	Intergenic	Lx8|LINE|L1	41524	NM_153092	231042	Mm.45513	NM_153092	ENSMUSG00000048439	Nupl2	AV116043|CG1|NLP-1|Nlp1	nucleoporin like 2	protein-coding
unique_peak2-38953-4-5--0.608423014574403-0.909929411522249	chr8	31171372	31171813	+	0	NA	Intergenic	Intergenic	-507275	NR_045856	71314	Mm.158666	NR_045856	ENSMUSG00000097044	4933433F19Rik	-	RIKEN cDNA 4933433F19 gene	ncRNA
common_peak2-27037-27-61--0.962650359491639-2.29782461879204	chr2	180171462	180172504	+	0	NA	Intergenic	Intergenic	-23700	NM_148933	108115	Mm.133687	NM_148933	ENSMUSG00000038963	Slco4a1	OATP-E|Slc21a12	solute carrier organic anion transporter family, member 4a1	protein-coding
common_peak1-8238-32-40--0.0784599853984238-0.303778768325576	chr10	13982744	13983788	+	0	NA	Intergenic	Intergenic	281576	NM_001002268	215798	Mm.440142	NM_001002268	ENSMUSG00000039116	Gpr126	1190004A11Rik|AI449247|AW045736|DREG|Gm222	G protein-coupled receptor 126	protein-coding
unique_peak1-3910-11-3-1.50869358425161-1.95434855131066	chr2	24358296	24358847	+	0	NA	Intergenic	Intergenic	-27452	NM_011040	18510	Mm.2533	NM_011040	ENSMUSG00000026976	Pax8	Pax-8	paired box 8	protein-coding
common_peak1-13296-32-17-1.10916701777735-2.22933157796382	chr19	38818726	38819859	+	0	NA	intron (NM_019588, intron 18 of 31)	intron (NM_019588, intron 18 of 31)	74435	NM_021315	57753	Mm.86482	NM_021315	ENSMUSG00000024999	Noc3l	AF233884|Fad24	nucleolar complex associated 3 homolog (S. cerevisiae)	protein-coding
common_peak2-25160-11-7-0.508693584251613-1.21681515183528	chr18	50061846	50062350	+	0	NA	intron (NM_001081371, intron 27 of 42)	intron (NM_001081371, intron 27 of 42)	69447	NM_001081371	240283	Mm.257790	NM_001081371	ENSMUSG00000037416	Dmxl1	C630007L23Rik|D030030C22	Dmx-like 1	protein-coding
unique_peak2-37295-2-9--2.23938235115068-1.87199725847353	chr4	119294588	119295020	+	0	NA	intron (NM_001290696, intron 9 of 11)	B2_Mm2|SINE|B2	-15533	NM_008190	14915	Mm.2614	NM_008190	ENSMUSG00000023247	Guca2a	Guca2	guanylate cyclase activator 2a (guanylin)	protein-coding
unique_peak1-1447-9-1-2.18961340640422-2.31132995230379	chr12	102185202	102185733	+	0	NA	intron (NM_026681, intron 13 of 29)	intron (NM_026681, intron 13 of 29)	-39059	NM_001177673	238377	Mm.32160	NM_175493	ENSMUSG00000047415	Gpr68	BB131428|Ogr1	G protein-coupled receptor 68	protein-coding
common_peak2-27772-27-33--0.0959168903551033-0.304370854244436	chr3	132870894	132872296	+	0	NA	intron (NM_029953, intron 1 of 3)	LTR83|LTR|ERVL	26258	NM_029953	77669	Mm.98630	NM_029953	ENSMUSG00000040969	Arhgef38	9130221D24Rik	Rho guanine nucleotide exchange factor (GEF) 38	protein-coding
unique_peak2-34947-5-9--1.02630843089322-1.21398586181642	chr15	89667452	89667910	+	0	NA	intron (NM_018803, intron 1 of 6)	B3|SINE|B2	4610	NM_018803	54526	Mm.261601	NM_018803	ENSMUSG00000063260	Syt10	-	synaptotagmin X	protein-coding
unique_peak2-38202-6-12--1.13504160776079-1.45089835786865	chr6	112683831	112684407	+	0	NA	intron (NM_080448, intron 18 of 21)	L1M4|LINE|L1	-37455	NM_001167730	58186	Mm.103812	NM_021385	ENSMUSG00000030254	Rad18	2810024C04Rik|Rad18sc	RAD18 homolog (S. cerevisiae)	protein-coding
common_peak1-9473-22-20-0.254966682308644-0.421916810733237	chr11	105952892	105953820	+	0	NA	intron (NM_011947, intron 1 of 15)	intron (NM_011947, intron 1 of 15)	7140	NM_011947	26406	Mm.27041	NM_011947	ENSMUSG00000020700	Map3k3	AW548911|MAPKKK3|Mekk3|mKIAA4031	mitogen-activated protein kinase kinase kinase 3	protein-coding
unique_peak2-37029-7-10--0.660340788339108-1.12966497611638	chr3	129535952	129536373	+	0	NA	Intergenic	B4A|SINE|B4	-1848	NM_026578	68147	Mm.24873	NM_026578	ENSMUSG00000028010	Gar1	AA409823|AI326794|C430047J18Rik|Nola1	GAR1 ribonucleoprotein homolog (yeast)	protein-coding
unique_peak1-1279-9-2-1.60465090568306-1.87199725847353	chr11	118349529	118350044	+	0	NA	3' UTR (NM_172573, exon 14 of 14)	3' UTR (NM_172573, exon 14 of 14)	11512	NM_172573	217364	Mm.473963	NM_172573	ENSMUSG00000033857	Engase	C130099A03|D230014K01Rik	endo-beta-N-acetylglucosaminidase	protein-coding
common_peak2-28352-9-9--0.132314688483142-1.03275496310833	chr4	135963065	135963495	+	0	NA	Intergenic	Intergenic	-16159	NM_001285482	15552	Mm.40573	NM_008309	ENSMUSG00000070687	Htr1d	5-HT-1D|5-HT1D|AI853647|Gpcr14|Htr1db	5-hydroxytryptamine (serotonin) receptor 1D	protein-coding
unique_peak1-2350-10-4-1.03448725012141-1.5150158574804	chr15	85683222	85683739	+	0	NA	intron (NM_001033337, intron 11 of 13)	intron (NM_001033337, intron 11 of 13)	-6657	NM_001168672	29870	Mm.20858	NM_013882	ENSMUSG00000022385	Gtse1	B99|Gtse-1	G two S phase expressed protein 1	protein-coding
common_peak2-30101-7-16--1.28837201095215-1.08658567012551	chr6	135065597	135066160	+	0	NA	intron (NM_001205396, intron 2 of 3)	intron (NM_001205396, intron 2 of 3)	2423	NM_053118	93746	Mm.49902	NM_053118	ENSMUSG00000030205	Gprc5d	-	G protein-coupled receptor, family C, group 5, member D	protein-coding
common_peak2-22272-42-55--0.0650255941904199-0.303022200133692	chr13	6606735	6608717	+	0	NA	intron (NM_001291071, intron 8 of 21)	intron (NM_001291071, intron 8 of 21)	40291	NM_019703	56421	Mm.273874	NM_019703	ENSMUSG00000021196	Pfkp	1200015H23Rik|9330125N24Rik|ATP-PFK|PFK-C|PFK-P	phosphofructokinase, platelet	protein-coding
unique_peak1-2016-11-2-1.92373108353046-2.32232533660526	chr15	8935299	8935829	+	0	NA	intron (NM_198024, intron 1 of 11)	L1Md_F2|LINE|L1	17615	NM_198024	223332	Mm.321371	NM_198024		Ranbp3l	C130037N17Rik	RAN binding protein 3-like	protein-coding
unique_peak1-1157-13-4-1.45654393575041-2.23384849113406	chr11	98948204	98948927	+	0	NA	intron (NM_172564, intron 1 of 12)	intron (NM_172564, intron 1 of 12)	2055	NM_172564	217169	Mm.262067	NM_172564	ENSMUSG00000017607	Tns4	9930017A07Rik|AA589547|AU016405|Cten	tensin 4	protein-coding
common_peak1-17951-113-127-0.448669745696709-1.96472299463488	chr7	127966823	127968005	+	0	NA	Intergenic	B3|SINE|B2	-18931	NM_007908	13631	Mm.25997	NM_007908	ENSMUSG00000035064	Eef2k	C86191|eEF-2K	eukaryotic elongation factor-2 kinase	protein-coding
unique_peak2-36125-7-13--1.00826409175941-0.697979855752659	chr2	5894826	5895373	+	0	NA	intron (NM_001081132, intron 4 of 21)	intron (NM_001081132, intron 4 of 21)	22584	NM_001081132	326622	Mm.31102	NM_001081132	ENSMUSG00000043241	Upf2	-	UPF2 regulator of nonsense transcripts homolog (yeast)	protein-coding
unique_peak1-702-11-1-2.50869358425161-2.83420869758413	chr10	81180761	81181167	+	0	NA	intron (NM_001243067, intron 1 of 3)	B3|SINE|B2	13394	NM_001243067	73610	Mm.490466	NM_001243067		Zfp433	1700123A16Rik	RIKEN cDNA 1700123A16 gene	protein-coding
unique_peak1-2139-12-5-1.06381348436648-1.78669045979184	chr15	57717779	57718286	+	0	NA	intron (NM_024207, intron 1 of 7)	intron (NM_024207, intron 1 of 7)	5941	NM_024207	67819	Mm.289387	NM_024207	ENSMUSG00000022365	Derl1	1110021N07Rik|AI195141|AW551338|Derlin-1	Der1-like domain family, member 1	protein-coding
unique_peak1-2804-10-2-1.77145284428761-2.09384600808989	chr17	21478234	21478781	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	27526	NM_134200	171234	Mm.405416	NM_134200	ENSMUSG00000058030	Vmn1r237	V1rf3|Vfrf3	vomeronasal 1 receptor 237	protein-coding
common_peak2-20079-30-44--0.322177686837802-0.475038482441584	chr1	154033803	154034866	+	0	NA	Intergenic	Intergenic	-96884	NM_197990	69399	Mm.278031	NM_197990	ENSMUSG00000032666	1700025G04Rik	2610510E02Rik|2900042O04Rik|ENSMUSG00000073540	RIKEN cDNA 1700025G04 gene	protein-coding
unique_peak1-3672-27-5-2.40658345017408-5.07532537266956	chr19	41447366	41448334	+	0	NA	intron (NM_031376, intron 2 of 16)	intron (NM_031376, intron 2 of 16)	11710	NM_031376	83490	Mm.222266	NM_031376	ENSMUSG00000025017	Pik3ap1	1810044J04Rik|BCAP	phosphoinositide-3-kinase adaptor protein 1	protein-coding
common_peak2-31873-23-22-0.198205548452068-0.373496418836697	chr9	54863680	54864430	+	0	NA	intron (NM_145129, intron 4 of 5)	MIR3|SINE|MIR	10311	NM_145129	110834	Mm.63569	NM_145129	ENSMUSG00000032303	Chrna3	(a)3|A730007P14Rik|Acra-3|Acra3	cholinergic receptor, nicotinic, alpha polypeptide 3	protein-coding
common_peak2-29469-34-56--0.450821487163475-0.736813861928694	chr6	30303773	30304661	+	0	NA	Intergenic	PB1D10|SINE|Alu	36793	NM_172735	232679	Mm.29780	NM_172735	ENSMUSG00000039130	Zc3hc1	1110054L24Rik|AU018540|AU019789|HSPC216|Nipa	zinc finger, C3HC type 1	protein-coding
common_peak1-15630-77-93-0.22993772787836-0.610533001990685	chr4	133751971	133754185	+	0	NA	intron (NM_001080712, intron 2 of 7)	MIRb|SINE|MIR	5841	NM_001080712	665186	Mm.318615	NM_001080712	ENSMUSG00000073747	Gm7534	EG665186	predicted gene 7534	protein-coding
common_peak1-10567-11-6-0.701338662194009-1.32595962126035	chr14	21498897	21499350	+	0	NA	intron (NM_001168273, intron 3 of 23)	RSINE1|SINE|B4	5580	NM_001168273	218811	Mm.173119	NM_172596	ENSMUSG00000039367	Sec24c	2610204K03Rik|mKIAA0079	Sec24 related gene family, member C (S. cerevisiae)	protein-coding
unique_peak1-5976-20-8-1.31814978314888-1.77631109801764	chr6	97294101	97294878	+	0	NA	intron (NM_145148, intron 8 of 23)	B1_Mur4|SINE|Alu	-91715	NM_001081157	320502	Mm.68163	NM_001081157	ENSMUSG00000044086	Lmod3	5430424A14Rik	leiomodin 3 (fetal)	protein-coding
unique_peak2-39624-8-7-0.00522241794757061-1.00793137938329	chr9	95795400	95795759	+	0	NA	intron (NM_019864, intron 21 of 46)	intron (NM_019864, intron 21 of 46)	-37278	NM_001271569	73410	Mm.443314	NM_028533		1700065D16Rik	-	RIKEN cDNA 1700065D16 gene	protein-coding
common_peak1-18938-14-20--0.493101262421116-0.456667090758524	chr9	45984514	45985229	+	0	NA	intron (NM_027498, intron 4 of 24)	RMER6A|LTR|ERVK	-51842	NM_009692	11806	Mm.26743	NM_009692	ENSMUSG00000032083	Apoa1	Alp-1|Apoa-1|Brp-14|Ltw-1|Lvtw-1|Sep-1|Sep-2|Sep2|apo-AI|apoA-I	apolipoprotein A-I	protein-coding
unique_peak1-4804-7-2-1.21412832957703-1.45399745587252	chr3	136440602	136441065	+	0	NA	intron (NM_008913, intron 1 of 13)	intron (NM_008913, intron 1 of 13)	107803	NM_001293622	19055	Mm.331389	NM_008913	ENSMUSG00000028161	Ppp3ca	2900074D19Rik|CN|Caln|Calna|CnA	protein phosphatase 3, catalytic subunit, alpha isoform	protein-coding
unique_peak2-39473-15-20--0.380152672223105-0.397739447719386	chr9	56551632	56552816	+	0	NA	Intergenic	Intergenic	-19164	NM_181074	235402	Mm.246605	NM_181074	ENSMUSG00000049556	Lingo1	4930471K13Rik|AV148400|LERN1|LINGO-1|Lrrn6a|UNQ201	leucine rich repeat and Ig domain containing 1	protein-coding
common_peak2-31064-19-17-0.232762325219374-0.392630012299441	chr8	22411409	22411908	+	0	NA	Intergenic	Intergenic	-15430	NM_007850	13237	Mm.436573	NM_007850	ENSMUSG00000074440	Defa3	Defa27|Defcr-3|Defcr3	defensin, alpha, 3	protein-coding
unique_peak1-6047-11-1-2.50869358425161-2.83420869758413	chr6	115373214	115373863	+	0	NA	intron (NM_011146, intron 1 of 6)	intron (NM_011146, intron 1 of 6)	1454	NM_011146	19016	Mm.3020	NM_011146	ENSMUSG00000000440	Pparg	Nr1c3|PPAR-gamma|PPAR-gamma2|PPARgamma|PPARgamma2	peroxisome proliferator activated receptor gamma	protein-coding
common_peak2-19769-6-7--0.434601889619698-0.97990265578305	chr1	82291114	82291572	+	0	NA	Intergenic	Intergenic	-3329	NM_010570	16367	Mm.4952	NM_010570	ENSMUSG00000055980	Irs1	G972R|IRS-1	insulin receptor substrate 1	protein-coding
common_peak2-22045-17-18--0.0296311752385474-0.306899554715732	chr12	69450203	69451355	+	0	NA	Intergenic	Intergenic	-680521	NR_033146	100316870	Mm.379794	NR_033146		Gm17821	-	DDB1 and CUL4 associated factor 5 pseudogene	pseudo
unique_peak2-37747-4-8--1.19338551529556-1.21878474469819	chr5	110839273	110839692	+	0	NA	intron (NM_001142642, intron 4 of 18)	intron (NM_001142642, intron 4 of 18)	21492	NR_105032	101056043	Mm.421924	NR_105032		LOC101056043	-	uncharacterized LOC101056043	ncRNA
common_peak1-18507-19-12-0.702247608520594-0.840839978588874	chr8	87071413	87072295	+	0	NA	intron (NM_007578, intron 11 of 46)	ID4|SINE|ID	114897	NM_010499	15936	Mm.399	NM_010499	ENSMUSG00000053560	Ier2	AI317238|Ch1|Pip92	immediate early response 2	protein-coding
common_peak1-17908-9-27--1.61774151565338-2.34622402919155	chr7	123370297	123370786	+	0	NA	Intergenic	Intergenic	-37186	NM_172743	233765	Mm.3741	NM_172743	ENSMUSG00000045659	Plekha7	A430081P20Rik|AI414265	pleckstrin homology domain containing, family A member 7	protein-coding
unique_peak1-1468-7-0-2.79909083029819-2.40823996531185	chr12	111093580	111094048	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	107726	NR_037233	100499517		NR_037233	miRBase:MI0014035	Mir3072	mmu-mir-3072	microRNA 3072	ncRNA
unique_peak2-36590-1-12--3.32749672835784-3.1004765869889	chr2	175800355	175800980	+	0	NA	promoter-TSS (NM_001199308).2	promoter-TSS (NM_001199308).2	-497	NM_001033123	13999		NM_001033123		Gm14288	OTTMUSG00000016199	predicted gene 14288	protein-coding
common_peak1-11870-9-21--1.26981821223308-1.37307999835977	chr16	93705467	93705967	+	0	NA	Intergenic	RLTR4_MM-int|LTR|ERV1	-6435	NM_026700	70028	Mm.23230	NM_026700	ENSMUSG00000022946	Dopey2	0610038M01Rik|2610510B01Rik|AI503246|C21orf5|mKIAA0933	dopey family member 2	protein-coding
common_peak1-15922-18-20--0.0793982715504091-0.301029995663976	chr5	24452004	24452921	+	0	NA	intron (NM_145401, intron 4 of 15)	intron (NM_145401, intron 4 of 15)	-38135	NM_001170556	108099	Mm.33649	NM_145401	ENSMUSG00000028944	Prkag2	2410051C13Rik|AAKG|AAKG2|AI854673|H91620p|WPWS	protein kinase, AMP-activated, gamma 2 non-catalytic subunit	protein-coding
common_peak1-12807-24-43--0.666221715869581-0.994385396256659	chr18	66458045	66459121	+	0	NA	Intergenic	Intergenic	-7091	NM_178793	320924	Mm.442049	NM_178793	ENSMUSG00000046318	Ccbe1	4933426F18Rik|9430093N24Rik|mKIAA1983	collagen and calcium binding EGF domains 1	protein-coding
common_peak2-20390-6-8--0.60452689106201-1.03789460276074	chr10	19957195	19957518	+	0	NA	intron (NM_008635, intron 3 of 17)	intron (NM_008635, intron 3 of 17)	29111	NM_001101561	621697	Mm.440587	NM_001101561		Gm6251	EG621697	predicted gene 6251	protein-coding
common_peak2-28923-9-11--0.395349094316936-0.344532117358383	chr5	92809215	92809737	+	0	NA	intron (NM_181728, intron 2 of 9)	Lx7|LINE|L1	-17154	NR_038116	56066	Mm.131723	NM_019494	ENSMUSG00000060183	Cxcl11	Cxc11|H174|I-tac|Ip9|Itac|Scyb11|Scyb9b|b-R1|betaR1	chemokine (C-X-C motif) ligand 11	protein-coding
common_peak2-23415-45-67--0.227104815905467-0.441863235260255	chr15	59759027	59760721	+	0	NA	Intergenic	Intergenic	88299	NM_027668	71088	Mm.425950	NM_027668	ENSMUSG00000071749	4933412E24Rik	-	RIKEN cDNA 4933412E24 gene	protein-coding
common_peak2-25378-9-21--1.26981821223308-1.37307999835977	chr18	84413258	84413931	+	0	NA	intron (NM_001033341, intron 8 of 8)	intron (NM_001033341, intron 8 of 8)	156044	NM_146090	225791	Mm.147052	NM_146090	ENSMUSG00000049090	Zadh2	C530046K17Rik|Pthr3	zinc binding alcohol dehydrogenase, domain containing 2	protein-coding
unique_peak1-4182-11-4-1.18676548936425-1.68134727924692	chr2	114796990	114797670	+	0	NA	Intergenic	Intergenic	-316666	NM_025675	66632	Mm.117809	NM_025675	ENSMUSG00000057147	Dph6	5730421E18Rik|Atpbd4	diphthamine biosynthesis 6	protein-coding
common_peak2-19709-9-10--0.269818212233077-1.05503135781948	chr1	64616772	64617188	+	0	NA	intron (NM_133828, intron 5 of 7)	intron (NM_133828, intron 5 of 7)	37602	NM_001037726	12912	Mm.422634	NM_009952	ENSMUSG00000025958	Creb1	2310001E10Rik|3526402H21Rik|AV083133|Creb|Creb-1	cAMP responsive element binding protein 1	protein-coding
common_peak2-27032-11-11--0.0762689164695427-0.301029995663976	chr2	179976012	179976644	+	0	NA	Intergenic	Intergenic	-15756	NM_025587	66481	Mm.289669	NM_025587	ENSMUSG00000039001	Rps21	1810049N11Rik|2410030A14Rik	ribosomal protein S21	protein-coding
common_peak2-30705-15-15-0.0121647505556561-0.30803596071496	chr7	112276906	112277526	+	0	NA	Intergenic	Intergenic	7243	NM_207557	404318	Mm.377938	NM_207557	ENSMUSG00000095248	Olfr681	MOR4014	olfactory receptor 681	protein-coding
common_peak2-27284-59-106--0.416102985528569-1.09282224205313	chr3	57734925	57736879	+	0	NA	Intergenic	B4A|SINE|B4	-84223	NM_019410	18645	Mm.271744	NM_019410	ENSMUSG00000027805	Pfn2	Pfn	profilin 2	protein-coding
common_peak2-32207-7-5-0.214128329577033-1.01466476204226	chr9	120770303	120770744	+	0	NA	Intergenic	Intergenic	53845	NR_040742	76402	Mm.436588	NR_040742		1700020M21Rik	-	RIKEN cDNA 1700020M21 gene	ncRNA
common_peak2-19636-14-16--0.188246680892695-0.308035960714963	chr1	39576766	39577464	+	0	NA	Intergenic	B4|SINE|B4	-15532	NM_028043	52846	Mm.259421	NM_028043	ENSMUSG00000003135	Cnot11	2410015L18Rik|C40|D1Bwg0212e	CCR4-NOT transcription complex, subunit 11	protein-coding
common_peak2-24184-37-56--0.306896942678923-0.514261803374139	chr16	55821412	55822637	+	0	NA	exon (NM_001159394, exon 1 of 12)	exon (NM_001159394, exon 1 of 12)	227	NM_001159394	80859	Mm.247272	NM_030612	ENSMUSG00000035356	Nfkbiz	AA408868|INAP|Mail	nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta	protein-coding
unique_peak1-6552-8-0-3.00522241794757-2.70926996097583	chr7	130520957	130521356	+	0	NA	promoter-TSS (NM_025304)	promoter-TSS (NM_025304)	-340	NM_025304	30949	Mm.260527	NM_025304	ENSMUSG00000030763	Lcmt1	AL033290|LCMT-1|Lcmt	leucine carboxyl methyltransferase 1	protein-coding
unique_peak2-34377-1-7--2.62705701021674-1.80617997398389	chr13	114727198	114727583	+	0	NA	intron (NM_172595, intron 3 of 4)	intron (NM_172595, intron 3 of 4)	142674	NM_172595	218639	Mm.79837	NM_172595	ENSMUSG00000042348	Arl15	A430036I03|Arfrp2|C230032K13Rik	ADP-ribosylation factor-like 15	protein-coding
unique_peak2-34550-6-10--0.894033508256995-1.21398586181642	chr14	61599497	61599950	+	0	NA	intron (NM_001164155, intron 5 of 9)	intron (NM_001164155, intron 5 of 9)	57101	NM_001164155	29820	Mm.281356	NM_013869	ENSMUSG00000060548	Tnfrsf19	AL023044|AW123854|TAJ|TAJ-ALPHA|TRADE|Troy	tumor necrosis factor receptor superfamily, member 19	protein-coding
unique_peak2-39239-6-15--1.4346018896197-1.16633110333236	chr8	111745263	111746033	+	0	NA	Intergenic	Lx7|LINE|L1	119160	NR_002928	384864	Mm.390083	NR_002928		Gm1943	-	WD repeat domain 70 pseudogene	pseudo
unique_peak1-5538-7-1-1.79909083029819-1.80617997398389	chr5	140428663	140429172	+	0	NA	intron (NM_175522, intron 1 of 1)	intron (NM_175522, intron 1 of 1)	45020	NM_175522	243312	Mm.237102	NM_175522	ENSMUSG00000048988	Elfn1	A930017N06Rik|AI197272|Ppp1r28	leucine rich repeat and fibronectin type III, extracellular 1	protein-coding
unique_peak1-3996-12-3-1.64877598508764-2.36932189928148	chr2	35259771	35260391	+	0	NA	intron (NM_001145821, intron 7 of 7)	MTC|LTR|MaLR	-7387	NM_001272040	74854	Mm.159338	NM_001080709	ENSMUSG00000079421	4930402F06Rik	-	RIKEN cDNA 4930402F06 gene	protein-coding
common_peak2-28395-17-7-1.21829633820504-1.55050753388977	chr4	139622717	139623111	+	0	NA	intron (NM_198610, intron 4 of 9)	intron (NM_198610, intron 4 of 9)	-98973	NM_173427	242721	Mm.60400	NM_173427	ENSMUSG00000078234	Klhdc7a	B230308G19Rik	kelch domain containing 7A	protein-coding
common_peak1-11557-23-49--0.922088685265644-1.85759988472352	chr16	11133969	11134776	+	0	NA	exon (NM_029582, exon 1 of 12)	exon (NM_029582, exon 1 of 12)	253	NM_029582	106200	Mm.291015	NM_029582	ENSMUSG00000022498	Txndc11	2810408E11Rik|AI427833|EFP1|Txdc11	thioredoxin domain containing 11	protein-coding
unique_peak2-32637-2-8--2.08737925770563-1.65811743852845	chr1	127409157	127409505	+	0	NA	Intergenic	L1Md_T|LINE|L1	-48262	NM_028787	74150	Mm.28654	NM_028787	ENSMUSG00000026342	Slc35f5	1300003P13Rik|AI646727	solute carrier family 35, member F5	protein-coding
common_peak1-16901-47-59-0.027950829158029-0.30826857217007	chr6	72346892	72348085	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-6827	NM_016794	22320	Mm.1838	NM_016794	ENSMUSG00000050732	Vamp8	AU041171|Edb|endobrevin	vesicle-associated membrane protein 8	protein-coding
common_peak1-9770-39-63--0.384238753080846-0.682033507942409	chr12	55398136	55399597	+	0	NA	Intergenic	MusHAL1|LINE|L1	64264	NR_108033	73592	Mm.416874	NR_108033		1700104L18Rik	-	RIKEN cDNA 1700104L18 gene	ncRNA
common_peak2-27112-11-16--0.578769256998726-0.503257505534083	chr3	10350791	10351411	+	0	NA	intron (NM_025512, intron 1 of 7)	intron (NM_025512, intron 1 of 7)	200	NM_025512	66361	Mm.371617	NM_025512	ENSMUSG00000039795	Zfand1	2310008M20Rik|AW048890	zinc finger, AN1-type domain 1	protein-coding
unique_peak2-37515-6-11--1.01956439034085-1.32595962126035	chr5	20881303	20882010	+	0	NA	exon (NM_008013, exon 2 of 2)	exon (NM_008013, exon 2 of 2)	3165	NM_008013	14190	Mm.292100	NM_008013	ENSMUSG00000039899	Fgl2	AI385601|musfiblp	fibrinogen-like protein 2	protein-coding
common_peak2-20634-11-15--0.491306415748387-0.435191258261915	chr10	80676729	80677271	+	0	NA	intron (NM_178662, intron 4 of 12)	B1_Mur3|SINE|Alu	-12218	NM_027120	69564	Mm.437211	NM_027120	ENSMUSG00000004939	Nmrk2	2310015C21Rik|Itgb1bp3|Mibp	nicotinamide riboside kinase 2	protein-coding
common_peak2-28186-29-26-0.357402578451643-0.590428395010953	chr4	115784679	115785551	+	0	NA	exon (NM_001122958, exon 5 of 19)	exon (NM_001122958, exon 5 of 19)	11179	NM_009015	19366	Mm.3655	NM_009015	ENSMUSG00000028702	Rad54l	RAD54	RAD54 like (S. cerevisiae)	protein-coding
common_peak1-15057-19-15-0.402687326661686-0.519193887192487	chr3	123052651	123053514	+	0	NA	intron (NM_027135, intron 14 of 22)	intron (NM_027135, intron 14 of 22)	35826	NM_201638	210529	Mm.260039	NM_201638	ENSMUSG00000028114	Mettl14	G430022H21Rik|mKIAA1627	methyltransferase like 14	protein-coding
unique_peak2-38291-12-24--0.995080204687086-1.0220094258199	chr6	135011596	135012356	+	0	NA	Intergenic	RSINE1|SINE|B4	-3704	NM_181444	232431	Mm.23575	NM_181444	ENSMUSG00000046733	Gprc5a	Rai3|Raig1	G protein-coupled receptor, family C, group 5, member A	protein-coding
unique_peak1-2206-8-2-1.42025991722641-1.65811743852845	chr15	67160656	67161115	+	0	NA	intron (NR_045140, intron 5 of 8)	L1Md_F3|LINE|L1	102554	NR_045140	69334	Mm.63770	NR_045140		1700012I11Rik	-	RIKEN cDNA 1700012I11 gene	ncRNA
common_peak2-24665-18-21--0.146512467408946-0.306326795069975	chr17	36001007	36002054	+	0	NA	exon (NM_134122, exon 4 of 4)	exon (NM_134122, exon 4 of 4)	-1010	NM_001146711	76448	Mm.359982	NM_175242	ENSMUSG00000034595	Ppp1r18	2310014H01Rik|AA407849|AI450394	protein phosphatase 1, regulatory subunit 18	protein-coding
common_peak2-31892-4-5--0.608423014574403-0.909929411522249	chr9	56872866	56873245	+	0	NA	intron (NM_019651, intron 4 of 12)	intron (NM_019651, intron 4 of 12)	30280	NM_019651	56294	Mm.325643	NM_019651	ENSMUSG00000032290	Ptpn9	MEG2	protein tyrosine phosphatase, non-receptor type 9	protein-coding
unique_peak1-3185-14-4-1.57728806547028-2.4322161449009	chr18	46862102	46862919	+	0	NA	Intergenic	Intergenic	25486	NM_033037	12583	Mm.241056	NM_033037	ENSMUSG00000033022	Cdo1	1300002L19Rik|Cdo|D18Ucla3	cysteine dioxygenase 1, cytosolic	protein-coding
common_peak1-15988-56-63-0.235595825439243-0.527904843875901	chr5	32610411	32612183	+	0	NA	intron (NM_030072, intron 21 of 38)	intron (NM_030072, intron 21 of 38)	-44656	NM_172147	665270	Mm.160067	NM_030072	ENSMUSG00000029134	Plb1	4632413E21Rik|4930433E17Rik|4930539A06Rik|BC033606	phospholipase B1	protein-coding
unique_peak2-38060-40-56--0.173914331413643-0.351783812734557	chr6	47667803	47669191	+	0	NA	Intergenic	Intergenic	25733	NR_002841	19799		NR_002841		Rn4.5s	-	4.5S RNA	rRNA
unique_peak1-258-18-3-2.31291915122835-3.35694334496952	chr1	91872343	91873300	+	0	NA	intron (NM_139152, intron 3 of 5)	L1ME2z|LINE|L1	38331	NM_139152	208372	Mm.215164	NM_139152	ENSMUSG00000067081	Asb18	Asb-18	ankyrin repeat and SOCS box-containing 18	protein-coding
unique_peak2-39508-2-5--1.50241675698448-1.08602067057793	chr9	63680330	63680683	+	0	NA	Intergenic	ID_B1|SINE|B4	-74705	NM_016769	17127	Mm.7320	NM_016769	ENSMUSG00000032402	Smad3	AU022421|Madh3	SMAD family member 3	protein-coding
common_peak2-26393-8-5-0.420259917226415-1.10484139239135	chr2	52960593	52960930	+	0	NA	intron (NM_172409, intron 11 of 26)	intron (NM_172409, intron 11 of 26)	89460	NM_018785	56194	Mm.257474	NM_018785	ENSMUSG00000061136	Prpf40a	2810012K09Rik|FBP11|Fnbp11|Fnbp3	PRP40 pre-mRNA processing factor 40 homolog A (yeast)	protein-coding
common_peak2-26100-15-23--0.5727977501655-0.575340103425218	chr2	3513041	3513753	+	0	NA	Intergenic	CT-rich|Low_complexity|Low_complexity	83060	NM_177647	227526	Mm.211455	NM_177647	ENSMUSG00000039496	Cdnf	9330140G23|Armetl1	cerebral dopamine neurotrophic factor	protein-coding
common_peak2-24474-12-26--1.10611151707583-1.26025077975594	chr17	24527282	24528042	+	0	NA	intron (NM_001039581, intron 17 of 31)	MTC-int|LTR|MaLR	23796	NR_033554	654822	Mm.489806	NM_001039561	ENSMUSG00000073437	D330041H03Rik	-	RIKEN cDNA D330041H03 gene	ncRNA
common_peak2-22109-13-27--1.02888289141984-1.21173582416604	chr12	80790566	80791470	+	0	NA	intron (NM_009014, intron 8 of 10)	B1_Mus1|SINE|Alu	392680	NM_001252562	19363	Mm.341756	NM_009014	ENSMUSG00000059060	Rad51b	AI553500|R51H2|Rad51l1|mREC2	RAD51 homolog B	protein-coding
unique_peak2-37130-4-8--1.19338551529556-1.21878474469819	chr4	14826000	14826470	+	0	NA	intron (NM_028264, intron 4 of 6)	intron (NM_028264, intron 4 of 6)	-31553	NM_001243100	100038514	Mm.331495	NM_001243100		Gm11837	OTTMUSG00000004551	predicted gene 11837	protein-coding
common_peak2-27987-6-5--0.0195643903408542-0.947717972411649	chr4	43729843	43730247	+	0	NA	Intergenic	MTD|LTR|MaLR	-10025	NM_027511	100039781	Mm.18796	NM_027511		Hrct1	3830408D24Rik	histidine rich carboxyl terminus 1	protein-coding
unique_peak1-5354-17-2-2.63333383748388-3.75443312462699	chr5	92366392	92367124	+	0	NA	Intergenic	Intergenic	24824	NR_073442	68098	Mm.159453	NM_026557	ENSMUSG00000029397	Rchy1	ARNIP|CHIMP|Pirh2|Zfp363|Znf363	ring finger and CHY zinc finger domain containing 1	protein-coding
common_peak2-21760-31-45--0.29832328524389-0.470780655014941	chr11	116130153	116131737	+	0	NA	intron (NM_146032, intron 2 of 15)	intron (NM_146032, intron 2 of 15)	4586	NM_146032	217337	Mm.29655	NM_146032	ENSMUSG00000020780	Srp68	2610024I03Rik	signal recognition particle 68	protein-coding
common_peak1-7817-8-13--0.802132504110034-0.562038191119711	chr1	125677820	125678341	+	0	NA	intron (NM_199021, intron 3 of 25)	CT-rich|Low_complexity|Low_complexity	264056	NM_199021	269109	Mm.483255	NM_199021	ENSMUSG00000036815	Dpp10	6430601K09Rik|DPP X|Dprp3	dipeptidylpeptidase 10	protein-coding
unique_peak2-36736-2-5--1.50241675698448-1.08602067057793	chr3	57408430	57408707	+	0	NA	Intergenic	Intergenic	-28736	NM_001168281	97064	Mm.405029	NM_133784	ENSMUSG00000027803	Wwtr1	2310058J06Rik|2610021I22Rik|C78399|Taz	WW domain containing transcription regulator 1	protein-coding
unique_peak2-33247-3-7--1.41398308995928-1.23214870625617	chr10	127063575	127063990	+	0	NA	Intergenic	URR1B|DNA|MER1_type	-5578	NM_008512	16971	Mm.271854	NM_008512	ENSMUSG00000040249	Lrp1	A2mr|AI316852|CD91|Lrp|b2b1554Clo	low density lipoprotein receptor-related protein 1	protein-coding
common_peak2-30409-34-64--0.640299286027188-1.29977634966096	chr7	35554547	35556113	+	0	NA	intron (NM_175140, intron 1 of 3)	(CA)n|Simple_repeat|Simple_repeat	42400	NM_175140	68947	Mm.29380	NM_175140	ENSMUSG00000060402	Chst8	1500011J21Rik|AI426009	carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8	protein-coding
common_peak2-29652-28-29-0.146068524212944-0.357106932979091	chr6	70824025	70825006	+	0	NA	intron (NM_010121, intron 2 of 16)	intron (NM_010121, intron 2 of 16)	29994	NM_010121	13666	Mm.247167	NM_010121	ENSMUSG00000031668	Eif2ak3	AI427929|Pek|Perk	eukaryotic translation initiation factor 2 alpha kinase 3	protein-coding
unique_peak1-5997-24-9-1.47128180788035-2.52428350728854	chr6	100180611	100181549	+	0	NA	3' UTR (NM_019743, exon 5 of 5)	3' UTR (NM_019743, exon 5 of 5)	56272	NM_019743	56353	Mm.321633	NM_019743	ENSMUSG00000072872	Rybp	2410018J24Rik|DEDAF|YEAF1	RING1 and YY1 binding protein	protein-coding
unique_peak1-4248-8-3-1.00522241794757-1.39487600375387	chr2	127703886	127704418	+	0	NA	intron (NM_028765, intron 5 of 17)	B1_Mus2|SINE|Alu	23788	NM_028765	74121	Mm.244835	NM_028765	ENSMUSG00000027380	Acoxl	1200014P05Rik|AV025673	acyl-Coenzyme A oxidase-like	protein-coding
common_peak2-30679-25-43--0.597581713292191-0.895935469411238	chr7	105736223	105737457	+	0	NA	Intergenic	RSINE1|SINE|B4	68239	NM_172280	233545	Mm.387819	NM_172280	ENSMUSG00000035401	2210018M11Rik	2310016L09Rik|AU019521|AU019557|Emsy	RIKEN cDNA 2210018M11 gene	protein-coding
common_peak2-28220-17-23--0.366666162516118-0.383878263347744	chr4	118542482	118543233	+	0	NA	TTS (NM_001011856)	TTS (NM_001011856)	1469	NM_001011856	258159	Mm.388910	NM_001011856	ENSMUSG00000073769	Olfr1331	MOR259-3P	olfactory receptor 1331	protein-coding
common_peak2-24042-11-11--0.0762689164695427-0.301029995663976	chr16	25041758	25042282	+	0	NA	Intergenic	Intergenic	-17705	NR_040374	319487	Mm.137341	NR_040374	ENSMUSG00000096960	A230028O05Rik	-	RIKEN cDNA A230028O05 gene	ncRNA
common_peak1-13016-11-12--0.191746133889479-0.310474156842889	chr19	5088446	5089066	+	0	NA	intron (NM_026553, intron 1 of 7)	CpG	218	NM_026553	68090	Mm.44202	NM_026553	ENSMUSG00000024875	Yif1a	5330422J23Rik|54TM|Yif1|Yif1p	Yip1 interacting factor homolog A (S. cerevisiae)	protein-coding
unique_peak2-35024-1-8--2.79698201165906-2.05605744720049	chr15	102459249	102459642	+	0	NA	Intergenic	ID_B1|SINE|B4	-3593	NM_146065	223922	Mm.208714	NM_146065	ENSMUSG00000099083	Atf7	1110012F10Rik|9430065F09Rik|AI549878|C130020M04Rik	activating transcription factor 7	protein-coding
common_peak2-30869-8-9--0.316705676939792-1.03275496310833	chr7	139971064	139971523	+	0	NA	intron (NM_212473, intron 1 of 4)	intron (NM_212473, intron 1 of 4)	7325	NM_175268	77938	Mm.225649	NM_175268	ENSMUSG00000030956	Fam53b	A930008G19Rik|mKIAA0140	family with sequence similarity 53, member B	protein-coding
common_peak2-19876-22-29--0.259606490521114-0.36542888694933	chr1	93634715	93635818	+	0	NA	Intergenic	Intergenic	-62788	NM_007855	13345	Mm.9474	NM_007855	ENSMUSG00000007805	Twist2	Dermo1|bHLHa39	twist basic helix-loop-helix transcription factor 2	protein-coding
common_peak1-13589-56-74-0.00677713494336274-0.302487370638123	chr2	15054571	15056283	+	0	NA	Intergenic	Intergenic	78438	NM_029466	75869	Mm.174068	NM_029466		Arl5b	4930587A11Rik|AW146430|Arl8	ADP-ribosylation factor-like 5B	protein-coding
unique_peak1-2939-10-2-1.77145284428761-2.09384600808989	chr17	62049194	62049705	+	0	NA	Intergenic	Lx|LINE|L1	1181217	NM_207654	13640	Mm.7978	NM_010109		Efna5	AL-1|AV158822|EFL-5|Ephrin-A5|Epl7|LERK-7|RAGS	ephrin A5	protein-coding
common_peak1-16000-34-17-1.21214352555895-2.67563291309484	chr5	33657247	33658797	+	0	NA	Intergenic	Intergenic	-20199	NM_021500	59003	Mm.281642	NM_021500	ENSMUSG00000079562	Maea	1110030D19Rik|EMP|Gid9	macrophage erythroblast attacher	protein-coding
unique_peak1-7214-8-2-1.42025991722641-1.65811743852845	chr9	70058105	70058594	+	0	NA	intron (NM_181072, intron 1 of 27)	intron (NM_181072, intron 1 of 27)	3192	NM_181072	71602	Mm.249311	NM_181072	ENSMUSG00000032220	Myo1e	2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3	myosin IE	protein-coding
common_peak2-20074-8-6-0.197867495889966-1.03789460276074	chr1	153202303	153202717	+	0	NA	3' UTR (NM_001039511, exon 8 of 8)	3' UTR (NM_001039511, exon 8 of 8)	10882	NM_001039511	117198	Mm.33764	NM_028582	ENSMUSG00000023150	Ivns1abp	1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850	influenza virus NS1A binding protein	protein-coding
unique_peak1-6649-9-1-2.18961340640422-2.31132995230379	chr8	11472186	11472721	+	0	NA	intron (NM_011227, intron 1 of 1)	MT2C_Mm|LTR|ERVL	6046	NM_011227	19332	Mm.37632	NM_011227		Rab20	AA536966|D8Ertd350e	RAB20, member RAS oncogene family	protein-coding
common_peak1-11463-10-8-0.186490343566457-1.078512453669	chr15	101522557	101523098	+	0	NA	promoter-TSS (NM_016879)	promoter-TSS (NM_016879)	-887	NM_016879	53622	Mm.347934	NM_016879		Krt85	AA589597|BB007925|Hb5|Krt2-18	keratin 85	protein-coding
common_peak1-12776-29-10-1.65285846197781-3.49519823291232	chr18	61613787	61615243	+	0	NA	Intergenic	B4|SINE|B4	29746	NR_045419	442846	Mm.417648	NR_045419		A530050N04Rik	-	RIKEN cDNA A530050N04 gene	ncRNA
common_peak1-12832-14-13-0.0918612383000403-0.332077462497413	chr18	69924745	69925382	+	0	NA	Intergenic	Intergenic	-160150	NM_201362	381175	Mm.266831	NM_201362	ENSMUSG00000038903	Ccdc68	BC046343	coiled-coil domain containing 68	protein-coding
common_peak2-26639-11-7-0.508693584251613-1.21681515183528	chr2	119491819	119492253	+	0	NA	Intergenic	Intergenic	-3502	NM_027175	69702	Mm.5390	NM_027175	ENSMUSG00000027305	Ndufaf1	2410001M24Rik|CGI-65|CIA30	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1	protein-coding
common_peak2-32317-12-15--0.351224014912361-0.332077462497413	chrX	69360222	69361039	+	0	NA	Intergenic	L1_Mus2|LINE|L1	-106726	NM_020280	17140	Mm.377097	NM_020280	ENSMUSG00000033343	Magea4	Mage-a4	melanoma antigen, family A, 4	protein-coding
common_peak2-24189-21-26--0.185398236897233-0.318406410381916	chr16	56037204	56038217	+	0	NA	5' UTR (NM_029092, exon 1 of 2)	5' UTR (NM_029092, exon 1 of 2)	177	NM_029092	52575	Mm.288742	NM_029092		Trmt10c	1300018J16Rik|D16Ertd454e|Rg9mtd1|Rnmtd1	tRNA methyltransferase 10C	protein-coding
common_peak2-31412-8-10--0.454209200689727-1.078512453669	chr8	94036554	94036990	+	0	NA	intron (NM_011936, intron 7 of 8)	intron (NM_011936, intron 7 of 8)	199348	NM_011936	26383	Mm.4375	NM_011936	ENSMUSG00000055932	Fto	AW743446|mKIAA1752	fat mass and obesity associated	protein-coding
common_peak2-27119-24-17-0.623284901325404-0.890873221665474	chr3	14886164	14886937	+	0	NA	5' UTR (NM_009801, exon 1 of 7)	5' UTR (NM_009801, exon 1 of 7)	124	NM_009801	12349	Mm.1186	NM_009801	ENSMUSG00000027562	Car2	AI131712|CAII|Ca2|Car-2|Ltw-5|Lvtw-5	carbonic anhydrase 2	protein-coding
common_peak1-17821-55-72-0.0147953122726845-0.30697942122102	chr7	104218650	104220138	+	0	NA	Intergenic	L1Md_T|LINE|L1	-10867	NM_001162477	14389	Mm.42033	NM_010248	ENSMUSG00000004508	Gab2	AI463667|D130058I17Rik|p97	growth factor receptor bound protein 2-associated protein 2	protein-coding
common_peak1-14639-13-7-0.778472030637769-0.817533494790411	chr3	57286274	57286852	+	0	NA	intron (NM_133784, intron 3 of 6)	intron (NM_133784, intron 3 of 6)	57231	NM_145539	229302	Mm.26618	NM_145539	ENSMUSG00000027801	Tm4sf4	Iltmp	transmembrane 4 superfamily member 4	protein-coding
common_peak1-15227-14-24--0.74464002941708-0.756118839439549	chr4	151044020	151044823	+	0	NA	intron (NM_001081557, intron 3 of 23)	intron (NM_001081557, intron 3 of 23)	191456	NM_001081557	100072	Mm.318846	NM_001081557	ENSMUSG00000014592	Camta1	1810059M14Rik|2310058O09Rik|AI316882|AW987475|mKIAA0833	calmodulin binding transcription activator 1	protein-coding
common_peak1-9463-28-24-0.409102930046738-0.610902792227729	chr11	103953207	103954781	+	0	NA	Intergenic	MTB|LTR|MaLR	-40202	NM_007762	12921	Mm.1892	NM_007762	ENSMUSG00000018634	Crhr1	CRFR1|Crhr	corticotropin releasing hormone receptor 1	protein-coding
common_peak2-20357-11-18--0.739233929191972-0.671582559449692	chr10	11149381	11150137	+	0	NA	intron (NM_010146, intron 2 of 3)	intron (NM_010146, intron 2 of 3)	86516	NM_010146	13853	Mm.89946	NM_010146		Epm2a	TG-B|Tg(TcraK,TcrbK)TG-BFlv	epilepsy, progressive myoclonic epilepsy, type 2 gene alpha	protein-coding
common_peak1-16861-12-19--0.673152109799724-0.546772548767014	chr6	56704227	56704818	+	0	NA	intron (NM_030235, intron 15 of 15)	intron (NM_030235, intron 15 of 15)	39623	NM_030235	78937	Mm.105343	NM_030235	ENSMUSG00000029787	Avl9	5830411G16Rik|D730049P16Rik|mKIAA0241	AVL9 homolog (S. cerevisiase)	protein-coding
unique_peak1-1781-9-2-1.60465090568306-1.87199725847353	chr14	7850394	7851000	+	0	NA	intron (NM_001164727, intron 2 of 6)	Lx3_Mus|LINE|L1	9266	NM_001164727	100038847	Mm.443041	NM_001164727	ENSMUSG00000093985	Gm10406	ENSMUSG00000072735	predicted gene 10406	protein-coding
unique_peak2-35906-7-10--0.660340788339108-1.12966497611638	chr19	4438981	4439369	+	0	NA	promoter-TSS (NR_045989)	promoter-TSS (NR_045989)	-148	NR_045990	319314	Mm.393810	NR_045989	ENSMUSG00000087132	A930001C03Rik	-	RIKEN cDNA A930001C03 gene	ncRNA
common_peak2-29854-21-17-0.399564263823923-0.561823156887258	chr6	99173594	99174287	+	0	NA	intron (NM_053202, intron 3 of 18)	intron (NM_053202, intron 3 of 18)	42569	NM_001197321	108655	Mm.234965	NM_053202	ENSMUSG00000030067	Foxp1	3110052D19Rik|4932443N09Rik|AI461938|AW494214	forkhead box P1	protein-coding
common_peak1-18298-13-15--0.221527969362231-0.308519316180257	chr8	45627769	45628306	+	0	NA	Intergenic	Intergenic	-407525	NM_001081286	14107	Mm.27365	NM_001081286	ENSMUSG00000070047	Fat1	2310038E12Rik|AU023433|Fath|mFat1	FAT tumor suppressor homolog 1 (Drosophila)	protein-coding
common_peak1-10553-11-8-0.338768582809301-1.14218153353838	chr14	20478299	20478866	+	0	NA	Intergenic	Intergenic	-56773	NM_001024706	432825	Mm.327147	NM_001024706	ENSMUSG00000095024	Gm5458	EG432825	predicted gene 5458	protein-coding
common_peak1-18138-21-41--0.822828157512525-1.27781945862486	chr8	10945507	10946224	+	0	NA	Intergenic	Intergenic	-17408	NR_030715	665306	Mm.358758	NR_030715	ENSMUSG00000038917	3930402G23Rik	-	RIKEN cDNA 3930402G23 gene	ncRNA
common_peak1-9831-15-28--0.845816244571916-1.02077663956385	chr12	75735053	75735873	+	0	NA	Intergenic	L1M4|LINE|L1	337002	NM_198866	386753	Mm.341686	NM_198866	ENSMUSG00000029878	Dbpht2	Spot2	DNA binding protein with his-thr domain	protein-coding
unique_peak1-6172-9-2-1.60465090568306-1.87199725847353	chr6	145360164	145360763	+	0	NA	intron (NM_028742, intron 8 of 9)	L1Md_F|LINE|L1	22982	NM_028742	74071	Mm.441497	NM_028742	ENSMUSG00000054966	Ifltd1	4933403M22Rik|AI482300|Lmna-rs1|Lmna1	intermediate filament tail domain containing 1	protein-coding
common_peak2-27435-14-10-0.439784541720347-0.519648556297791	chr3	89801570	89802149	+	0	NA	promoter-TSS (NR_045749)	promoter-TSS (NR_045749)	779	NM_011826	23897	Mm.256035	NM_011826	ENSMUSG00000027944	Hax1	HAX-1|HSP1BP-1|Hs1bp1|SIG-111|Silg111|mHAX-1s	HCLS1 associated X-1	protein-coding
unique_peak2-35182-3-8--1.58390809140159-1.39487600375387	chr16	50364474	50364819	+	0	NA	intron (NM_027444, intron 2 of 16)	intron (NM_027444, intron 2 of 16)	67856	NM_027444	70508	Mm.28940	NM_027444	ENSMUSG00000022641	Bbx	5530401J07Rik|5730403O13Rik	bobby sox homolog (Drosophila)	protein-coding
unique_peak1-2214-8-2-1.42025991722641-1.65811743852845	chr15	73318605	73319096	+	0	NA	Intergenic	Intergenic	-24140	NM_001081066	105841	Mm.322557	NM_001081066	ENSMUSG00000036661	Dennd3	AI447457|E030003N15Rik	DENN/MADD domain containing 3	protein-coding
common_peak2-31436-4-5--0.608423014574403-0.909929411522249	chr8	95809738	95810131	+	0	NA	Intergenic	Intergenic	-6299	NM_144930	234564	Mm.29110	NM_144930	ENSMUSG00000031725	Ces1f	AU018778|CesML1|TGH-2	carboxylesterase 1F	protein-coding
common_peak1-12578-11-8-0.338768582809301-1.14218153353838	chr18	12224798	12225533	+	0	NA	non-coding (NR_110356, exon 10 of 16)	non-coding (NR_110356, exon 10 of 16)	54881	NR_110356	338363	Mm.271567	NM_178801	ENSMUSG00000049411	Tmem241	6030446N20Rik	transmembrane protein 241	protein-coding
common_peak1-9385-10-14--0.550475250599749-0.446472590016315	chr11	98935770	98936335	+	0	NA	intron (NM_172564, intron 6 of 12)	intron (NM_172564, intron 6 of 12)	14568	NM_172564	217169	Mm.262067	NM_172564	ENSMUSG00000017607	Tns4	9930017A07Rik|AA589547|AU016405|Cten	tensin 4	protein-coding
common_peak2-31975-67-105--0.183508971780204-0.459052083208626	chr9	69397728	69398774	+	0	NA	Intergenic	Intergenic	93500	NR_037296	100526560		NR_037296	miRBase:MI0014106	Mir3109	mmu-mir-3109	microRNA 3109	ncRNA
common_peak1-14607-11-10-0.0492619656143161-0.31137425193576	chr3	51998201	51998806	+	0	NA	Intergenic	MLT1F|LTR|MaLR	-73756	NM_019739	56458	Mm.29891	NM_019739	ENSMUSG00000044167	Foxo1	AI876417|Afxh|FKHR|Fkhr1|Foxo1a	forkhead box O1	protein-coding
common_peak1-14647-9-1-2.18961340640422-2.31132995230379	chr3	57334721	57335246	+	0	NA	intron (NM_133784, intron 2 of 6)	intron (NM_133784, intron 2 of 6)	44815	NM_133784	97064	Mm.405029	NM_133784	ENSMUSG00000027803	Wwtr1	2310058J06Rik|2610021I22Rik|C78399|Taz	WW domain containing transcription regulator 1	protein-coding
common_peak1-10866-184-164-0.929669288542902-10.6971339172659	chr15	101318191	101323441	+	0	NA	intron (NM_001201323, intron 1 of 8)	intron (NM_001201323, intron 1 of 8)	1127	NM_001201323	100126226	Mm.347934	NM_001201323	ENSMUSG00000067613	5430421N21Rik	-	RIKEN cDNA 5430421N21 gene	protein-coding
common_peak2-23672-43-36-0.573109819894753-1.16883084967253	chr15	85665302	85666002	+	0	NA	intron (NM_001033337, intron 3 of 13)	intron (NM_001033337, intron 3 of 13)	2918	NM_001033337	239570	Mm.151748	NM_001033337	ENSMUSG00000035944	Ttc38	9030019H09	tetratricopeptide repeat domain 38	protein-coding
common_peak2-20708-17-51--1.48214337993605-3.59866429024318	chr10	93889029	93889855	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-88160	NM_172051	319880	Mm.23047	NM_172051	ENSMUSG00000020023	Tmcc3	AW488095|C630016B22Rik|C88213|Tmcc1	transmembrane and coiled coil domains 3	protein-coding
common_peak1-15832-89-145--0.154857804054015-0.455302203899196	chr5	135167801	135169504	+	0	NA	Intergenic	L1M3|LINE|L1	-4192	NM_010717	16885	Mm.15409	NM_010717	ENSMUSG00000029674	Limk1	-	LIM-domain containing, protein kinase	protein-coding
common_peak1-14753-9-13--0.617741515653384-0.459837087125828	chr3	88035157	88035672	+	0	NA	Intergenic	Intergenic	15894	NR_029817	387133		NR_029817		Mir9-1	Mirn9|Mirn9-1|mmu-mir-9-1	microRNA 9-1	ncRNA
common_peak2-23125-16-8-0.948338640825749-1.02063122982878	chr14	99364435	99364889	+	0	NA	Intergenic	Intergenic	80693	NM_175245	76789	Mm.38912	NM_175245	ENSMUSG00000033186	Mzt1	2410129H14Rik|AI120158|Mozart1	mitotic spindle organizing protein 1	protein-coding
unique_peak1-2368-8-3-1.00522241794757-1.39487600375387	chr15	89666469	89666987	+	0	NA	intron (NM_018803, intron 1 of 6)	intron (NM_018803, intron 1 of 6)	5563	NM_018803	54526	Mm.261601	NM_018803	ENSMUSG00000063260	Syt10	-	synaptotagmin X	protein-coding
unique_peak2-37799-8-11--0.579740082773585-1.14218153353838	chr5	122820879	122821364	+	0	NA	intron (NM_026883, intron 1 of 6)	intron (NM_026883, intron 1 of 6)	851	NM_026883	68948	Mm.474469	NM_026883		Fam216a	1500011H22Rik	family with sequence similarity 216, member A	protein-coding
common_peak1-13885-14-9-0.577288065470282-0.630231561310125	chr2	75643269	75643975	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-26612	NM_172666	228061	Mm.31227	NM_172666	ENSMUSG00000042410	Agps	5832437L22|9930035G10Rik|AW123847|Adaps|Adas|Adhaps|Adps|Aldhpsy|bs2	alkylglycerone phosphate synthase	protein-coding
unique_peak1-1003-12-5-1.06381348436648-1.78669045979184	chr11	71995830	71996545	+	0	NA	intron (NM_028963, intron 7 of 18)	GA-rich|Low_complexity|Low_complexity	20686	NM_028963	74477	Mm.289697	NM_028963	ENSMUSG00000020807	4933427D14Rik	C85113|Kiaa0753	RIKEN cDNA 4933427D14 gene	protein-coding
unique_peak2-35563-3-5--0.998945590680433-0.96108193396963	chr17	66111558	66111836	+	0	NA	intron (NM_133685, intron 1 of 6)	B2_Mm1t|SINE|B2	10395	NM_133685	106572	Mm.29274	NM_133685	ENSMUSG00000056515	Rab31	1700093E07Rik|AI415285|Rab22B	RAB31, member RAS oncogene family	protein-coding
common_peak2-24063-22-43--0.812147513549893-1.34810744351377	chr16	30065510	30067268	+	0	NA	intron (NM_008235, intron 3 of 3)	CpG	946	NM_008235	15205	Mm.390859	NM_008235	ENSMUSG00000022528	Hes1	Hry|bHLHb39	hairy and enhancer of split 1 (Drosophila)	protein-coding
common_peak2-21881-56-63-0.235595825439243-0.527904843875901	chr12	100186770	100188281	+	0	NA	intron (NM_198311, intron 7 of 14)	B4|SINE|B4	28703	NM_198311	76260	Mm.282660	NM_029553	ENSMUSG00000021013	Ttc8	0610012F22Rik|AV001447|BBS8	tetratricopeptide repeat domain 8	protein-coding
common_peak2-24374-18-31--0.687080848771648-0.820293215674341	chr17	8310989	8311592	+	0	NA	Intergenic	Intergenic	-17197	NM_001033442	381059	Mm.490353	NM_001033442		Gm1604b	ENSMUSG00000073470|Gm1604	predicted gene 1604b	protein-coding
common_peak2-22916-16-14-0.211373046659543-0.364171515310935	chr14	41018448	41019217	+	0	NA	Intergenic	L1Md_F2|LINE|L1	549881	NR_045936	73591	Mm.65499	NR_045936		1700109I08Rik	-	RIKEN cDNA 1700109I08 gene	ncRNA
common_peak2-28101-12-27--1.15857893696997-1.38791538138627	chr4	88790810	88791347	+	0	NA	intron (NM_024433, intron 1 of 7)	URR1A|DNA|MER1_type	7804	NM_024433	66902	Mm.28500	NM_024433	ENSMUSG00000062937	Mtap	1300019I21Rik|MSAP	methylthioadenosine phosphorylase	protein-coding
common_peak2-27888-16-20--0.274053780510699-0.353907621462756	chr4	135675900	135676539	+	0	NA	Intergenic	Intergenic	-23518	NM_008321	15903	Mm.110	NM_008321		Id3	Hlh462|Idb3|bHLHb25	inhibitor of DNA binding 3	protein-coding
unique_peak1-4494-9-5-0.604650905683064-1.21398586181642	chr3	4690355	4690862	+	0	NA	Intergenic	(GA)n|Simple_repeat|Simple_repeat	-108100	NR_045272	100503859	Mm.75172	NR_045272	ENSMUSG00000098659	1110015O18Rik	-	RIKEN cDNA 1110015O18 gene	ncRNA
unique_peak1-7398-11-1-2.50869358425161-2.83420869758413	chrX	109190891	109191619	+	0	NA	Intergenic	L1VL4|LINE|L1	-15874	NM_031382	83556	Mm.190608	NM_031382	ENSMUSG00000034555	Tex16	OTTMUSG00000018437	testis expressed gene 16	protein-coding
common_peak1-11121-21-12-0.869049547125143-1.18646456559501	chr15	64184854	64185699	+	0	NA	intron (NM_001276467, intron 1 of 29)	Lx8|LINE|L1	29205	NM_001276461	13196	Mm.277236	NM_010026	ENSMUSG00000022377	Asap1	AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19	ArfGAP with SH3 domain, ankyrin repeat and PH domain1	protein-coding
unique_peak1-5221-24-5-2.20824740204656-4.1393347358673	chr5	36728556	36729513	+	0	NA	intron (NM_030889, intron 1 of 26)	intron (NM_030889, intron 1 of 26)	11754	NM_030889	81840	Mm.34113	NM_030889	ENSMUSG00000029093	Sorcs2	N28137|mKIAA1329	sortilin-related VPS10 domain containing receptor 2	protein-coding
common_peak1-16031-23-16-0.634304663258741-0.82304638657543	chr5	36183119	36183989	+	0	NA	intron (NM_001177697, intron 11 of 18)	intron (NM_001177697, intron 11 of 18)	-52414	NM_027373	70292	Mm.125167	NM_027373	ENSMUSG00000029094	Afap1	2600003E23Rik|9630044L16Rik|AI848729|Afap|mKIAA3018	actin filament associated protein 1	protein-coding
common_peak1-13526-13-9-0.456543935750406-0.53895475198017	chr2	151961308	151961993	+	0	NA	Intergenic	MTEb|LTR|MaLR	-7695	NM_009328	21407	Mm.3881	NM_009328	ENSMUSG00000068079	Tcf15	Meso1|bHLH-EC2	transcription factor 15	protein-coding
common_peak1-11942-19-8-1.23276232521937-1.61268301619756	chr17	3419887	3420711	+	0	NA	intron (NM_001122998, intron 3 of 26)	B1F|SINE|Alu	23092	NM_011878	24001	Mm.137134	NM_011878	ENSMUSG00000023800	Tiam2	3000002F19Rik|STEF|mKIAA2016	T cell lymphoma invasion and metastasis 2	protein-coding
common_peak2-29463-13-11-0.193509529916613-0.379391706698377	chr6	29433022	29433589	+	0	NA	intron (NM_001029985, intron 36 of 37)	intron (NM_001029985, intron 36 of 37)	11868	NM_001145360	668210	Mm.420607	NM_001145360	ENSMUSG00000090685	Gm9047	EG668210	predicted gene 9047	protein-coding
common_peak1-14805-29-56--0.72059993354963-1.36290396447365	chr3	90247659	90248710	+	0	NA	Intergenic	Intergenic	-10626	NM_178876	229543	Mm.268564	NM_145540	ENSMUSG00000027933	Ints3	C77668	integrator complex subunit 3	protein-coding
unique_peak2-34984-5-6--0.511735258063458-0.947717972411649	chr15	99033968	99034353	+	0	NA	intron (NM_139140, intron 9 of 12)	intron (NM_139140, intron 9 of 12)	-21247	NM_010601	16512	Mm.374793	NM_010601	ENSMUSG00000037579	Kcnh3	AU019351|C030044P22Rik|Elk2|Kv12.2|Melk2	potassium voltage-gated channel, subfamily H (eag-related), member 3	protein-coding
common_peak1-9225-20-9-1.16614668970383-1.52222891542741	chr11	84168506	84169360	+	0	NA	intron (NM_133360, intron 43 of 53)	intron (NM_133360, intron 43 of 53)	158070	NM_019816	56321	Mm.257482	NM_019816	ENSMUSG00000018697	Aatf	4933415H02Rik|5830465M17Rik|Che-1|Trb	apoptosis antagonizing transcription factor	protein-coding
common_peak2-31399-26-33--0.159563749091877-0.332062764479297	chr8	90828239	90829315	+	0	NA	intron (NM_007406, intron 3 of 27)	RLTR20A2|LTR|ERVK	10674	NM_001037724	11513	Mm.288206	NM_007406	ENSMUSG00000031659	Adcy7	AA407758	adenylate cyclase 7	protein-coding
unique_peak2-33261-6-10--0.894033508256995-1.21398586181642	chr10	128337886	128338409	+	0	NA	Intergenic	Intergenic	-7828	NM_001042580	12512	Mm.371552	NM_007653	ENSMUSG00000025351	Cd63	C75951|ME491|Tspan30	CD63 antigen	protein-coding
unique_peak1-3360-10-2-1.77145284428761-2.09384600808989	chr19	41992170	41992756	+	0	NA	3' UTR (NM_023418, exon 4 of 4)	3' UTR (NM_023418, exon 4 of 4)	6102	NM_023418	18648	Mm.391589	NM_023418	ENSMUSG00000011752	Pgam1	2310050F24Rik|Pgam-1	phosphoglycerate mutase 1	protein-coding
unique_peak1-6589-13-8-0.608547029195456-0.660903317613904	chr7	143800186	143800820	+	0	NA	Intergenic	Intergenic	101784	NR_046021	621677	Mm.207290	NR_046021		Gm6249	EG621677	predicted gene 6249	ncRNA
common_peak1-16104-9-5-0.604650905683064-1.21398586181642	chr5	65199169	65199512	+	0	NA	intron (NM_008453, intron 1 of 5)	intron (NM_008453, intron 1 of 5)	4578	NM_008453	16599	Mm.392759	NM_008453	ENSMUSG00000029178	Klf3	9930027G08Rik|AL024007|Bklf|Tef-2	Kruppel-like factor 3 (basic)	protein-coding
unique_peak1-6508-17-0-4.21829633820504-6.02059991327962	chr7	116462330	116463006	+	0	NA	intron (NM_054103, intron 12 of 13)	L2|LINE|L2	119899	NM_054103	117229	Mm.389950	NM_054103	ENSMUSG00000031027	Stk33	4921505G21Rik|AW061264	serine/threonine kinase 33	protein-coding
common_peak2-31213-29-12-1.41185036247402-2.85339697372352	chr8	65128961	65129552	+	0	NA	Intergenic	L1Md_A|LINE|L1	-300773	NM_001252620	72902	Mm.334552	NM_023689	ENSMUSG00000054162	Spock3	2900045C01Rik|AI428471|mKIAA4039	sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	protein-coding
common_peak2-26861-16-13-0.310908720210457-0.417187467413082	chr2	155592266	155592861	+	0	NA	Intergenic	B1F1|SINE|Alu	-8517	NM_010808	17391	Mm.330707	NM_010808	ENSMUSG00000027612	Mmp24	AU040325|MT5-MMP|MT5MMP|MTMMP5	matrix metallopeptidase 24	protein-coding
common_peak2-27422-12-9-0.326847890200276-0.459837087125828	chr3	88914047	88914484	+	0	NA	Intergenic	(TC)n|Simple_repeat|Simple_repeat	-8376	NM_001253751	110196	Mm.39472	NM_134469	ENSMUSG00000059743	Fdps	6030492I17Rik|AI256750|Fdpsl1|mKIAA1293	farnesyl diphosphate synthetase	protein-coding
common_peak2-24755-39-83--0.776556175859607-2.22432009274867	chr17	55944316	55945695	+	0	NA	intron (NM_139138, intron 11 of 16)	intron (NM_139138, intron 11 of 16)	55756	NM_139138	52614	Mm.210497	NM_139138	ENSMUSG00000032915	Emr4	D17Ertd479e|Egf-tm7|Fire|Gpr127	EGF-like module containing, mucin-like, hormone receptor-like sequence 4	protein-coding
common_peak1-14347-53-73--0.0684803532130216-0.307062057408912	chr2	165033852	165035141	+	0	NA	intron (NM_174988, intron 1 of 11)	intron (NM_174988, intron 1 of 11)	25741	NM_174988	104010	Mm.151819	NM_174988	ENSMUSG00000053166	Cdh22	-	cadherin 22	protein-coding
common_peak1-15424-9-13--0.617741515653384-0.459837087125828	chr4	88938731	88939331	+	0	NA	intron (NM_009877, intron 1 of 2)	B1_Mus2|SINE|Alu	1492	NM_009877	12578	Mm.4733	NM_009877	ENSMUSG00000044303	Cdkn2a	ARF-INK4a|Arf|INK4a-ARF|Ink4a/Arf|MTS1|Pctr1|p16|p16(INK4a)|p16INK4a|p19<ARF>|p19ARF	cyclin-dependent kinase inhibitor 2A	protein-coding
common_peak1-10442-30-21-0.710243790854576-1.16836819221353	chr13	104023389	104024432	+	0	NA	intron (NM_175171, intron 1 of 28)	Charlie1a|DNA|MER1_type	100662	NM_175171	328329	Mm.202606	NM_175171	ENSMUSG00000034751	Mast4	4930420O11Rik|AI642422|mKIAA0303	microtubule associated serine/threonine kinase family member 4	protein-coding
common_peak2-23973-17-34--0.910986678739929-1.23560027455358	chr16	17451473	17452629	+	0	NA	promoter-TSS (NM_007764)	promoter-TSS (NM_007764)	-27	NM_001277231	12929	Mm.21048	NM_007764		Crkl	1110025F07Rik|AA589403|AI325100|Crkol	v-crk sarcoma virus CT10 oncogene homolog (avian)-like	protein-coding
common_peak2-22199-27-57--0.866435044232336-1.84665509793009	chr12	110850108	110851091	+	0	NA	TTS (NR_029770)	TTS (NR_029770)	567	NR_035419	100316669		NR_035419	miRBase:MI0006290	Mir1188	Mirn1188|mmu-mir-1188	microRNA 1188	ncRNA
common_peak2-30574-12-20--0.743541437691122-0.625923329873571	chr7	80026227	80026754	+	0	NA	Intergenic	Intergenic	220464	NR_046024	625243	Mm.261798	NR_046024		Gm6567	-	predicted gene 6567	ncRNA
common_peak2-20014-8-10--0.454209200689727-1.078512453669	chr1	135509782	135510266	+	0	NA	Intergenic	Intergenic	-3167	NM_009227	20643	Mm.249110	NM_009227	ENSMUSG00000090553	Snrpe	AL022645|C76690|SME	small nuclear ribonucleoprotein E	protein-coding
common_peak2-22987-45-59--0.046532570263647-0.302885977585733	chr14	56885440	56886459	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-4852	NM_013542	14939	Mm.14874	NM_013542	ENSMUSG00000015437	Gzmb	AI553453|CCP-1/C11|CCP1|Ctla-1|Ctla1|GZB	granzyme B	protein-coding
unique_peak2-35687-5-7--0.704380336005853-1.01466476204226	chr18	20741291	20741674	+	0	NA	exon (NM_007883, exon 8 of 15)	exon (NM_007883, exon 8 of 15)	24865	NM_007883	13511	Mm.345891	NM_007883	ENSMUSG00000044393	Dsg2	AA408168|D18Ertd293e	desmoglein 2	protein-coding
unique_peak1-195-15-7-1.01216475055566-1.08658567012551	chr1	78705032	78705866	+	0	NA	Intergenic	Intergenic	50434	NM_001136226	195434	Mm.276016	NM_001001981	ENSMUSG00000079470	Utp14b	4932411L21Rik|jsd	UTP14, U3 small nucleolar ribonucleoprotein, homolog B (yeast)	protein-coding
common_peak2-28632-22-33--0.440178736162935-0.541406350295756	chr5	28071258	28072015	+	0	NA	intron (NM_018878, intron 17 of 20)	intron (NM_018878, intron 17 of 20)	46454	NM_018878	55982	Mm.277190	NM_018878	ENSMUSG00000002221	Paxip1	D5Ertd149e|PTIP	PAX interacting (with transcription-activation domain) protein 1	protein-coding
common_peak2-29585-17-9-0.896368243317676-1.09394599973099	chr6	49319263	49319804	+	0	NA	intron (NM_001172216, intron 1 of 5)	intron (NM_001172216, intron 1 of 5)	1795	NM_172727	231946	Mm.35199	NM_172727	ENSMUSG00000047115	Fam221a	D330028D13Rik	family with sequence similarity 221, member A	protein-coding
unique_peak1-911-8-2-1.42025991722641-1.65811743852845	chr11	43894405	43894899	+	0	NA	Intergenic	Intergenic	-179913	NM_001284381	11548	Mm.39086	NM_007416	ENSMUSG00000050541	Adra1b	[a]1b	adrenergic receptor, alpha 1b	protein-coding
common_peak2-26202-21-46--0.985099586411402-1.82819694957564	chr2	25557198	25558414	+	0	NA	intron (NM_153558, intron 5 of 6)	intron (NM_153558, intron 5 of 6)	2212	NM_153558	227627	Mm.44630	NM_153558	ENSMUSG00000062061	Obp2a	BC027556|Lcn13	odorant binding protein 2A	protein-coding
common_peak2-24186-27-30-0.0373496405083609-0.315041925765932	chr16	55966207	55967161	+	0	NA	exon (NM_024218, exon 2 of 6)	exon (NM_024218, exon 2 of 6)	296	NM_024218	68193	Mm.29221	NM_024218	ENSMUSG00000098274	Rpl24	0610008L05Rik|Bst	ribosomal protein L24	protein-coding
unique_peak1-5988-13-2-2.19350952991661-3.03832868024006	chr6	99131167	99131834	+	0	NA	intron (NM_053202, intron 3 of 18)	intron (NM_053202, intron 3 of 18)	85009	NM_001197321	108655	Mm.234965	NM_053202	ENSMUSG00000030067	Foxp1	3110052D19Rik|4932443N09Rik|AI461938|AW494214	forkhead box P1	protein-coding
common_peak1-18870-7-9--0.522837264589173-1.05908390183068	chr9	22259297	22259814	+	0	NA	intron (NM_018739, intron 3 of 5)	intron (NM_018739, intron 3 of 5)	13245	NM_018739	55934	Mm.38235	NM_018739	ENSMUSG00000032239	Rp9	PAP-1|Rp9h	retinitis pigmentosa 9 (human)	protein-coding
unique_peak1-3590-9-2-1.60465090568306-1.87199725847353	chr19	30121349	30121909	+	0	NA	intron (NM_144873, intron 2 of 15)	ORR1A3|LTR|MaLR	16626	NM_144873	109113	Mm.313364	NM_144873	ENSMUSG00000024817	Uhrf2	2310065A22Rik|AI426270|AW214556|D130071B19Rik|Nirf	ubiquitin-like, containing PHD and RING finger domains 2	protein-coding
unique_peak1-4241-9-1-2.18961340640422-2.31132995230379	chr2	126304433	126304953	+	0	NA	intron (NM_001080944, intron 3 of 27)	intron (NM_001080944, intron 3 of 27)	12596	NM_001080944	241633	Mm.222235	NM_001080944	ENSMUSG00000060131	Atp8b4	A530043E15|Im	ATPase, class I, type 8B, member 4	protein-coding
common_peak1-18722-51-68--0.0336006311755961-0.302638508455059	chr8	123064576	123066138	+	0	NA	intron (NM_001145896, intron 1 of 15)	intron (NM_001145896, intron 1 of 15)	2761	NR_106159	102466849		NR_106159		Mir7687	mmu-mir-7687	microRNA mir-7687	ncRNA
common_peak1-16871-11-14--0.398197011356905-0.379391706698377	chr6	59208900	59209407	+	0	NA	Intergenic	B4A|SINE|B4	50289	NM_001081145	68140	Mm.25843	NM_001081145	ENSMUSG00000049232	Tigd2	3632410O17Rik	tigger transposable element derived 2	protein-coding
common_peak2-30559-7-8--0.370834171144123-1.00793137938329	chr7	78972909	78973374	+	0	NA	Intergenic	Intergenic	478340	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding
unique_peak1-2920-9-1-2.18961340640422-2.31132995230379	chr17	48184448	48184893	+	0	NA	Intergenic	Intergenic	-9427	NM_029689	76651	Mm.76918	NM_029689	ENSMUSG00000094928	1700122O11Rik	-	RIKEN cDNA 1700122O11 gene	protein-coding
unique_peak1-1689-11-3-1.50869358425161-1.95434855131066	chr13	75228478	75229136	+	0	NA	intron (NM_013628, intron 1 of 13)	intron (NM_013628, intron 1 of 13)	1372	NM_013628	18548	Mm.1333	NM_013628	ENSMUSG00000021587	Pcsk1	Nec-1|Nec1|PC1|PC3|Phpp-1|SPC3	proprotein convertase subtilisin/kexin type 1	protein-coding
common_peak1-8685-16-20--0.274053780510699-0.353907621462756	chr11	29130498	29131459	+	0	NA	intron (NM_025740, intron 4 of 9)	ID4|SINE|ID	16294	NM_025740	216618	Mm.128663	NM_025740	ENSMUSG00000020462	Ccdc104	2300003H10|4931428D14Rik	coiled-coil domain containing 104	protein-coding
unique_peak2-33327-6-17--1.60452689106201-1.49151883326343	chr11	17158659	17159229	+	0	NA	intron (NM_020558, intron 1 of 4)	intron (NM_020558, intron 1 of 4)	1323	NM_020558	57316	Mm.287982	NM_020558	ENSMUSG00000000581	C1d	1110036E10Rik|AI875855|SUN-CoR	C1D nuclear receptor co-repressor	protein-coding
unique_peak1-1134-15-3-2.01216475055566-3.03427613622886	chr11	95990886	95991692	+	0	NA	Intergenic	ID_B1|SINE|B4	-3811	NM_172799	237930	Mm.249912	NM_172799	ENSMUSG00000038756	Ttll6	4932418K24Rik|D11Moh43e|D11Moh44e|t8130b59	tubulin tyrosine ligase-like family, member 6	protein-coding
common_peak1-17197-35-51--0.269069459678588-0.449053920623485	chr6	124917157	124918112	+	0	NA	Intergenic	B1_Mur2|SINE|Alu	-2087	NM_001164089	26894	Mm.244536	NM_012003	ENSMUSG00000030127	Cops7a	D6Ertd35e	COP9 (constitutive photomorphogenic) homolog, subunit 7a (Arabidopsis thaliana)	protein-coding
common_peak2-20122-86-79-0.653707699144991-2.66186648710827	chr1	163929466	163930706	+	0	NA	intron (NM_172646, intron 19 of 19)	intron (NM_172646, intron 19 of 19)	-5014	NR_040562	72753	Mm.452125	NR_040562	ENSMUSG00000090260	2810442N19Rik	-	RIKEN cDNA 2810442N19 gene	ncRNA
common_peak1-16063-16-23--0.466698858453094-0.497202060940027	chr5	48372100	48372882	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-1903	NR_111900	20563	Mm.289739	NM_178804		Slit2	Drad-1|E030015M03Rik|E130320P19Rik|Slil3|mKIAA4141|slit-2	slit homolog 2 (Drosophila)	protein-coding
common_peak1-13377-20-8-1.31814978314888-1.77631109801764	chr19	46471255	46472266	+	0	NA	exon (NM_015752, exon 1 of 12)	exon (NM_015752, exon 1 of 12)	374	NM_015752	24069	Mm.41210	NM_015752	ENSMUSG00000025231	Sufu	Su(fu)	suppressor of fused homolog (Drosophila)	protein-coding
common_peak1-8604-73-95-0.107432505704065-0.371238112422406	chr10	112928069	112929417	+	0	NA	Intergenic	Intergenic	-562661	NM_001033474	382423	Mm.431239	NM_001033474	ENSMUSG00000074748	Atxn7l3b	4921506J03Rik|6230409E21Rik|AI315132|ENSMUSG00000074747	ataxin 7-like 3B	protein-coding
common_peak2-31401-50-69--0.088342700466014-0.315507670109565	chr8	90876084	90878233	+	0	NA	intron (NM_012047, intron 5 of 16)	intron (NM_012047, intron 5 of 16)	8932	NM_012047	26992	Mm.5400	NM_012047		Brd7	BP75|CELTIX1|Ptpn13ip	bromodomain containing 7	protein-coding
common_peak1-9936-17-23--0.366666162516118-0.383878263347744	chr12	108178564	108179263	+	0	NA	Intergenic	Intergenic	-224379	NR_015512	71033	Mm.159404	NR_015512	ENSMUSG00000085820	4933406K04Rik	4930426M03Rik|4930485I22Rik|4933427G14Rik	RIKEN cDNA 4933406K04 gene	ncRNA
common_peak1-8013-33-30-0.377141252138654-0.612304185853042	chr1	167307923	167308983	+	0	NA	intron (NM_028759, intron 10 of 18)	L1_Mus4|LINE|L1	82141	NM_028759	74106	Mm.227605	NM_028759	ENSMUSG00000026571	Dcaf6	1200006M05Rik|Iqwd1|PC326	DDB1 and CUL4 associated factor 6	protein-coding
unique_peak2-36019-0-7--3.84013093047421-1.80617997398389	chr19	41849130	41849558	+	0	NA	intron (NM_027667, intron 9 of 11)	intron (NM_027667, intron 9 of 11)	27230	NM_001163495	71085	Mm.21646	NM_027667	ENSMUSG00000025154	Arhgap19	4933411B03Rik|AI120128|AW546831|mFLJ00368	Rho GTPase activating protein 19	protein-coding
common_peak1-10047-83-71-0.744297623663814-3.16132581941167	chr13	17943258	17945105	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-47250	NM_027118	69562	Mm.193924	NM_027118	ENSMUSG00000041297	Cdk13	2310015O17Rik|Cdc2l5	cyclin-dependent kinase 13	protein-coding
common_peak1-17727-12-18--0.599151528355947-0.476916024233333	chr7	80207802	80208418	+	0	NA	Intergenic	Intergenic	38844	NR_046024	625243	Mm.261798	NR_046024		Gm6567	-	predicted gene 6567	ncRNA
common_peak2-28262-12-10-0.189344366450341-0.386243247519795	chr4	126468180	126468702	+	0	NA	intron (NM_001035526, intron 2 of 23)	intron (NM_001035526, intron 2 of 23)	37427	NM_001035526	100317	Mm.206206	NM_133886	ENSMUSG00000028830	AU040320	A730047D20Rik|Kiaa0319l	expressed sequence AU040320	protein-coding
common_peak2-21990-51-42-0.648659070900475-1.55729322517715	chr12	54696239	54696939	+	0	NA	intron (NM_013780, intron 3 of 11)	intron (NM_013780, intron 3 of 11)	346925	NM_013780	27386	Mm.247044	NM_013780	ENSMUSG00000021010	Npas3	4930423H22Rik|bHLHe12	neuronal PAS domain protein 3	protein-coding
common_peak1-18073-160-235-0.170170096580075-0.717820141550361	chr8	23165036	23169398	+	0	NA	intron (NM_007511, intron 1 of 20)	intron (NM_007511, intron 1 of 20)	3329	NM_007511	11979	Mm.87854	NM_007511	ENSMUSG00000006567	Atp7b	Atp7a|WND|tx	ATPase, Cu++ transporting, beta polypeptide	protein-coding
common_peak1-13874-13-4-1.45654393575041-2.23384849113406	chr2	71640216	71640704	+	0	NA	intron (NM_001277970, intron 1 of 24)	intron (NM_001277970, intron 1 of 24)	15464	NM_001277970	16403	Mm.225096	NM_008397		Itga6	5033401O05Rik|AI115430|Cd49f|VLA-6	integrin alpha 6	protein-coding
unique_peak1-59-16-3-2.11826364226806-2.65002542325363	chr1	33755672	33756370	+	0	NA	Intergenic	MTD|LTR|MaLR	-20720	NM_008999	19335	Mm.86744	NM_008999	ENSMUSG00000004768	Rab23	AW545388|opb|opb2	RAB23, member RAS oncogene family	protein-coding
common_peak2-23838-34-46--0.172520324676372-0.340524918943711	chr15	101938743	101940496	+	0	NA	intron (NM_153533, intron 11 of 28)	intron (NM_153533, intron 11 of 28)	6200	NM_153533	209039	Mm.29389	NM_153533	ENSMUSG00000037003	Tenc1	C1-ten|nep|nph	tensin like C1 domain-containing phosphatase	protein-coding
unique_peak2-39677-4-8--1.19338551529556-1.21878474469819	chr9	108346653	108347269	+	0	NA	intron (NM_001004192, intron 2 of 3)	B1_Mm|SINE|Alu	8148	NM_001004192	434439	Mm.78372	NM_001004192	ENSMUSG00000050641	BC048562	-	cDNA sequence BC048562	protein-coding
unique_peak2-36065-6-16--1.52206473087004-1.32521814697968	chr19	53325280	53325966	+	0	NA	intron (NR_036590, intron 1 of 2)	intron (NR_036590, intron 1 of 2)	4072	NR_036590	69319	Mm.57452	NR_036590		1700001K23Rik	-	RIKEN cDNA 1700001K23 gene	ncRNA
common_peak2-29309-77-157--0.519254168621106-2.1069728492598	chr5	145231043	145232590	+	0	NA	Intergenic	(GAA)n|Simple_repeat|Simple_repeat	-74940	NM_016789	53324	Mm.10099	NM_016789	ENSMUSG00000059991	Nptx2	Narp|np2	neuronal pentraxin 2	protein-coding
common_peak1-16793-62-26-1.65586395663862-7.47442460200306	chr6	41522755	41524812	+	0	NA	Intergenic	Intergenic	-31698	NM_001146351	13848	Mm.271976	NM_007680	ENSMUSG00000029869	Ephb6	Cekl|Mep	Eph receptor B6	protein-coding
unique_peak1-2193-9-2-1.60465090568306-1.87199725847353	chr15	66463272	66463809	+	0	NA	intron (NM_001081409, intron 17 of 20)	B4A|SINE|B4	-38792	NM_009375	21819	Mm.441333	NM_009375	ENSMUSG00000053469	Tg	Tgn|cog	thyroglobulin	protein-coding
common_peak2-28200-8-13--0.802132504110034-0.562038191119711	chr4	116807282	116807897	+	0	NA	Intergenic	Intergenic	-1032	NM_013807	12795	Mm.259022	NM_013807	ENSMUSG00000028680	Plk3	Cnk|Fnk|PRK	polo-like kinase 3	protein-coding
unique_peak2-35352-1-8--2.79698201165906-2.05605744720049	chr17	25451789	25451960	+	0	NA	Intergenic	(TC)n|Simple_repeat|Simple_repeat	-3725	NM_053260	114662	Mm.207082	NM_053260	ENSMUSG00000034039	Prss29	D19363|Isp2|mISP-2	protease, serine 29	protein-coding
unique_peak2-34412-2-5--1.50241675698448-1.08602067057793	chr14	11809809	11810244	+	0	NA	intron (NM_010210, intron 2 of 8)	intron (NM_010210, intron 2 of 8)	184520	NM_010210	14198	Mm.397619	NM_010210	ENSMUSG00000060579	Fhit	AW045638|Fra14A2	fragile histidine triad gene	protein-coding
common_peak1-16409-69-71-0.42521744581642-1.17831092014796	chr5	125405219	125407395	+	0	NA	Intergenic	Intergenic	63232	NM_001081750	269704	Mm.138617	NM_001081750	ENSMUSG00000079215	Zfp664	AW060232|D930038J03Rik|ZFOC1|Znf664	zinc finger protein 664	protein-coding
common_peak2-21686-40-50--0.013449659220397-0.303180003474857	chr11	104468628	104470110	+	0	NA	promoter-TSS (NM_016780)	promoter-TSS (NM_016780)	55	NM_016780	16416	Mm.87150	NM_016780	ENSMUSG00000020689	Itgb3	CD61|GP3A|INGRB3	integrin beta 3	protein-coding
common_peak2-31956-16-27--0.689091279789542-0.798885335210229	chr9	65541836	65542432	+	0	NA	3' UTR (NM_172536, exon 10 of 10)	3' UTR (NM_172536, exon 10 of 10)	17779	NM_001301307	18247	Mm.116749	NM_010952	ENSMUSG00000040652	Oaz2	AZ-2|AZ2|Oaz2-ps|Sez15	ornithine decarboxylase antizyme 2	protein-coding
common_peak2-19692-9-10--0.269818212233077-1.05503135781948	chr1	59579797	59580280	+	0	NA	intron (NM_001013771, intron 1 of 19)	(TG)n|Simple_repeat|Simple_repeat	6930	NM_001013771	381260	Mm.486706	NM_001013771	ENSMUSG00000047361	Gm973	AW554518	predicted gene 973	protein-coding
unique_peak2-37213-5-9--1.02630843089322-1.21398586181642	chr4	82511482	82512007	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-6179	NM_026647	68268	Mm.32047	NM_026647	ENSMUSG00000028403	Zdhhc21	9130404H11Rik|AL024349|D130004H04Rik|dep	zinc finger, DHHC domain containing 21	protein-coding
unique_peak1-1710-8-5-0.420259917226415-1.10484139239135	chr13	92611150	92611668	+	0	NA	intron (NM_009027, intron 9 of 23)	intron (NM_009027, intron 9 of 23)	290040	NM_009027	19418	Mm.248630	NM_009027		Rasgrf2	6330417G04Rik|AW048350|Grf2|Ras-GRF2	RAS protein-specific guanine nucleotide-releasing factor 2	protein-coding
unique_peak2-36827-6-9--0.75652998450706-1.11707584880836	chr3	88504057	88504535	+	0	NA	exon (NM_028814, exon 10 of 14)	exon (NM_028814, exon 10 of 14)	14580	NM_028814	74200	Mm.251800	NM_028814	ENSMUSG00000028060	2810403A07Rik	A430106P18Rik|AI256352|AI451678|Blom7|Kiaa0907	RIKEN cDNA 2810403A07 gene	protein-coding
common_peak1-12004-39-33-0.528298405668814-0.983321682013132	chr17	13742294	13743928	+	0	NA	intron (NR_045436, intron 1 of 4)	intron (NR_045436, intron 1 of 4)	3849	NR_045436	72578	Mm.46549	NR_045436	ENSMUSG00000038347	2700054A10Rik	-	RIKEN cDNA 2700054A10 gene	ncRNA
unique_peak1-3984-9-1-2.18961340640422-2.31132995230379	chr2	34565083	34565591	+	0	NA	intron (NM_025709, intron 11 of 26)	B2_Mm2|SINE|B2	45415	NM_025709	66691	Mm.156452	NM_025709	ENSMUSG00000026867	Gapvd1	2010005B09Rik|4432404J10Rik|AW108497|Gapex-5|RAP6|RME-6|mKIAA1521	GTPase activating protein and VPS9 domains 1	protein-coding
common_peak2-23817-14-40--1.45833584426044-2.86150037395323	chr15	101240956	101242327	+	0	NA	Intergenic	Intergenic	-1193	NM_033073	110310	Mm.486285	NM_033073		Krt7	D15Wsu77e|K7|Krt2-7	keratin 7	protein-coding
unique_peak2-36693-6-6--0.241956811677302-0.947717972411649	chr3	36067054	36067490	+	0	NA	3' UTR (NM_001101478, exon 4 of 4)	3' UTR (NM_001101478, exon 4 of 4)	17270	NM_001101478	241944	Mm.260056	NM_001101478	ENSMUSG00000033883	D3Ertd254e	-	DNA segment, Chr 3, ERATO Doi 254, expressed	protein-coding
common_peak1-10164-12-15--0.351224014912361-0.332077462497413	chr13	37857418	37858035	+	0	NA	Intergenic	MTEa|LTR|MaLR	-60181	NM_026830	68750	Mm.491109	NM_026830	ENSMUSG00000039087	Rreb1	1110037N09Rik|AA414966|B930013M22Rik	ras responsive element binding protein 1	protein-coding
common_peak1-13543-40-63--0.341024317248902-0.575830045570394	chr2	3712226	3714071	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	82418	NM_025626	66540	Mm.277864	NM_025626	ENSMUSG00000026655	Fam107b	3110001A13Rik|AA589595|AA959793|AI132312	family with sequence similarity 107, member B	protein-coding
unique_peak1-7378-14-1-2.89921616035764-3.91338994363176	chrX	73714791	73715437	+	0	NA	Intergenic	L1Md_T|LINE|L1	76425	NM_001033799	619294	Mm.423961	NM_001033799	ENSMUSG00000073085	4930428D18Rik	-	RIKEN cDNA 4930428D18 gene	protein-coding
common_peak2-28885-18-15-0.312919151228352-0.456667090758524	chr5	88554406	88555025	+	0	NA	Intergenic	Intergenic	39134	NM_001252680	20600	Mm.1397	NM_021289	ENSMUSG00000029281	Smr2	MSG2|Vcs2	submaxillary gland androgen regulated protein 2	protein-coding
common_peak1-9703-18-7-1.31291915122835-1.71830443967823	chr12	25110584	25111179	+	0	NA	Intergenic	IAPLTR3-int|LTR|ERVK	-72565	NM_020614	21340	Mm.39082	NM_020614	ENSMUSG00000059669	Taf1b	4930408G01Rik|A230108M10Rik|TAFI68|Tafi86	TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B	protein-coding
common_peak1-16928-13-8-0.608547029195456-0.660903317613904	chr6	83028212	83028754	+	0	NA	promoter-TSS (NM_197992)	promoter-TSS (NM_197992)	99	NM_197992	69837	Mm.12261	NM_197992	ENSMUSG00000069678	Pcgf1	2010002K04Rik|AU024121|Nspc1	polycomb group ring finger 1	protein-coding
unique_peak2-32621-6-12--1.13504160776079-1.45089835786865	chr1	118368197	118368785	+	0	NA	intron (NM_001077425, intron 19 of 23)	intron (NM_001077425, intron 19 of 23)	786777	NM_001077425	636808	Mm.101576	NM_001077425	ENSMUSG00000070695	Cntnap5a	Caspr5-1|EG636808	contactin associated protein-like 5A	protein-coding
unique_peak2-35831-8-22--1.51833953810944-1.77631109801764	chr18	66503615	66504670	+	0	NA	Intergenic	ID_B1|SINE|B4	-52650	NM_178793	320924	Mm.442049	NM_178793	ENSMUSG00000046318	Ccbe1	4933426F18Rik|9430093N24Rik|mKIAA1983	collagen and calcium binding EGF domains 1	protein-coding
common_peak2-31418-7-10--0.660340788339108-1.12966497611638	chr8	94377711	94378198	+	0	NA	Intergenic	Intergenic	-52401	NM_008393	16373	Mm.238044	NM_008393	ENSMUSG00000031734	Irx3	AI894186	Iroquois related homeobox 3	protein-coding
common_peak2-26742-22-32--0.397110014271049-0.488172498216822	chr2	132247472	132248463	+	0	NA	Intergenic	Intergenic	-2510	NR_045802	70845	Mm.158461	NR_045802	ENSMUSG00000027345	4921508D12Rik	-	RIKEN cDNA 4921508D12 gene	ncRNA
common_peak1-18444-17-16-0.130833496954699-0.356936432242225	chr8	82402479	82403221	+	0	NA	Intergenic	Lx6|LINE|L1	167131	NM_026904	68999	Mm.257445	NM_026904	ENSMUSG00000036977	Anapc10	1500026N15Rik|A830003M23Rik|APC10	anaphase promoting complex subunit 10	protein-coding
common_peak2-29793-9-11--0.395349094316936-0.344532117358383	chr6	90369524	90370052	+	0	NA	intron (NM_173775, intron 2 of 16)	intron (NM_173775, intron 2 of 16)	8686	NM_173775	243538	Mm.386876	NM_173775	ENSMUSG00000048794	Ccdc37	AW048498|C030041G11Rik|C230069K22Rik	coiled-coil domain containing 37	protein-coding
common_peak1-10267-16-13-0.310908720210457-0.417187467413082	chr13	55727107	55727801	+	0	NA	intron (NM_007596, intron 2 of 3)	B3|SINE|B2	3088	NM_007596	12328	Mm.2313	NM_007596	ENSMUSG00000021501	Caml	AI385748|Camlg	calcium modulating ligand	protein-coding
common_peak1-13082-74-82-0.340847145631683-0.916871060311385	chr19	6950516	6952563	+	0	NA	Intergenic	RLTR19|LTR|ERVK	-18838	NM_001081291	78317	Mm.329596	NM_198008	ENSMUSG00000047810	Ccdc88b	2610041P08Rik|Ccdc88	coiled-coil domain containing 88B	protein-coding
common_peak1-13058-9-18--1.05831410703937-0.965105923112245	chr19	6076827	6077288	+	0	NA	exon (NM_001081041, exon 1 of 10)	exon (NM_001081041, exon 1 of 10)	130	NM_001081041	68505	Mm.227361	NM_001081041	ENSMUSG00000024797	Vps51	1110014N23Rik|3110057M17Rik|AI837850|Ffr	vacuolar protein sorting 51 homolog (S. cerevisiae)	protein-coding
unique_peak1-1248-8-3-1.00522241794757-1.39487600375387	chr11	115326467	115326900	+	0	NA	intron (NM_001080934, intron 2 of 3)	(T)n|Simple_repeat|Simple_repeat	2896	NM_001080934	217316	Mm.25773	NM_001080934		Slc16a5	A130015N09Rik|MCT 5|MCT 6|MCT5	solute carrier family 16 (monocarboxylic acid transporters), member 5	protein-coding
unique_peak1-3418-12-4-1.32684789020028-2.04196296489515	chr19	5966505	5967220	+	0	NA	Intergenic	Intergenic	-2656	NM_008893	18969	Mm.209931	NM_008893	ENSMUSG00000024833	Pola2	AI573378	polymerase (DNA directed), alpha 2	protein-coding
unique_peak1-7275-8-5-0.420259917226415-1.10484139239135	chr9	99133310	99133659	+	0	NA	intron (NM_001244762, intron 3 of 4)	B3|SINE|B2	4174	NM_001244762	623459	Mm.260891	NM_001244762	ENSMUSG00000096316	Gm6432	EG623459	predicted gene 6432	protein-coding
unique_peak1-2966-12-6-0.841421063030034-1.58711810488664	chr17	72648107	72648644	+	0	NA	intron (NM_007439, intron 3 of 28)	B4|SINE|B4	305272	NM_007439	11682	Mm.311854	NM_007439	ENSMUSG00000055471	Alk	CD246|Tcrz	anaplastic lymphoma kinase	protein-coding
common_peak2-19729-11-7-0.508693584251613-1.21681515183528	chr1	72400069	72400539	+	0	NA	intron (NM_009533, intron 14 of 20)	intron (NM_009533, intron 14 of 20)	46309	NM_009533	22596	Mm.246952	NM_009533	ENSMUSG00000026187	Xrcc5	AI314015|Ku80|Ku86	X-ray repair complementing defective repair in Chinese hamster cells 5	protein-coding
common_peak2-21953-19-24--0.241168863113038-0.344491671143527	chr12	32819503	32820170	+	0	NA	Intergenic	Intergenic	73367	NM_001146201	30955	Mm.101369	NM_020272	ENSMUSG00000020573	Pik3cg	5830428L06Rik|PI3Kgamma|p110gamma	phosphoinositide-3-kinase, catalytic, gamma polypeptide	protein-coding
common_peak1-8459-13-11-0.193509529916613-0.379391706698377	chr10	80023948	80024678	+	0	NA	promoter-TSS (NM_025852)	promoter-TSS (NM_025852)	-8	NM_025852	66932	Mm.1116	NM_025852	ENSMUSG00000047417	Rexo1	1700021P10Rik|2610511M11Rik|AW050347|EloA-BP1|Tceb3bp1	REX1, RNA exonuclease 1 homolog (S. cerevisiae)	protein-coding
common_peak1-11192-18-20--0.0793982715504091-0.301029995663976	chr15	77335860	77336613	+	0	NA	Intergenic	CT-rich|Low_complexity|Low_complexity	-2465	NM_001177533	626615	Mm.390820	NM_001177533	ENSMUSG00000091650	Apol11a	EG626615	apolipoprotein L 11a	protein-coding
common_peak1-7513-13-20--0.613845392140992-0.532159081577619	chr1	16688513	16689102	+	0	NA	intron (NM_001159711, intron 2 of 4)	intron (NM_001159711, intron 2 of 4)	10270	NM_016923	17087	Mm.116844	NM_016923	ENSMUSG00000025779	Ly96	ESOP-1|MD-2|MD2	lymphocyte antigen 96	protein-coding
common_peak2-28872-31-35-0.0553136693708112-0.313095283157747	chr5	76904990	76906227	+	0	NA	Intergenic	Intergenic	-7494	NR_033501	639545	Mm.478255	NR_033501		Gm7271	EG639545	predicted gene 7271	pseudo
common_peak2-24391-83-84-0.504831688968425-1.75912742783898	chr17	13554649	13556812	+	0	NA	intron (NM_001167578, intron 7 of 11)	(TCTG)n|Simple_repeat|Simple_repeat	8292	NM_001167578	100041352	Mm.490251	NM_001167578	ENSMUSG00000052469	Tcp10c	D17Leh66C|D17Leh66ca|Gm9880|T66C-a|Tcp-10c	t-complex protein 10c	protein-coding
common_peak2-21408-24-31--0.206790097232283-0.334168439396943	chr11	83454389	83455888	+	0	NA	Intergenic	Intergenic	7742	NM_011337	20302	Mm.1282	NM_011337	ENSMUSG00000000982	Ccl3	AI323804|G0S19-1|LD78alpha|MIP-1alpha|MIP1-(a)|MIP1-alpha|Mip1a|Scya3	chemokine (C-C motif) ligand 3	protein-coding
common_peak2-25066-96-156--0.128569534536298-0.405288483971646	chr18	34859322	34861734	+	0	NA	intron (NM_010280, intron 3 of 7)	intron (NM_010280, intron 3 of 7)	19513	NM_010280	14587	Mm.16520	NM_010280	ENSMUSG00000024366	Gfra3	GFRalpha3|Y15110	glial cell line derived neurotrophic factor family receptor alpha 3	protein-coding
unique_peak1-1389-9-1-2.18961340640422-2.31132995230379	chr12	59012753	59013273	+	0	NA	Intergenic	L1Md_A|LINE|L1	-299778	NM_009216	20605	Mm.278336	NM_009216		Sstr1	SRIF-2|SS-1-R|SS1-R|SS1R|Smstr-1|Smstr1|sst1	somatostatin receptor 1	protein-coding
common_peak2-27449-25-31--0.138150094654894-0.315509160416417	chr3	90231482	90232390	+	0	NA	intron (NM_178876, intron 1 of 30)	B1_Mur4|SINE|Alu	5622	NM_145540	229543	Mm.268564	NM_145540	ENSMUSG00000027933	Ints3	C77668	integrator complex subunit 3	protein-coding
unique_peak1-5410-7-2-1.21412832957703-1.45399745587252	chr5	107949406	107949902	+	0	NA	Intergenic	B1F2|SINE|Alu	-14076	NM_182745	76421	Mm.67037	NM_175241	ENSMUSG00000089798	1700028K03Rik	-	RIKEN cDNA 1700028K03 gene	protein-coding
unique_peak2-36386-5-9--1.02630843089322-1.21398586181642	chr2	120403502	120404013	+	0	NA	intron (NM_001177792, intron 1 of 8)	PB1D9|SINE|Alu	10350	NM_009222	20619	Mm.245715	NM_009222	ENSMUSG00000027287	Snap23	23kDa|AA408749|SNAP-23|Sndt|Syndet	synaptosomal-associated protein 23	protein-coding
unique_peak1-4590-16-5-1.53330114154691-1.80287260729378	chr3	58366973	58367704	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-13242	NM_001040396	69227	Mm.270950	NM_001040396	ENSMUSG00000075700	Selt	2810407C02Rik|5730408P04Rik	selenoprotein T	protein-coding
common_peak1-8269-8-17--1.16470258349474-1.02063122982878	chr10	24149426	24149874	+	0	NA	Intergenic	Intergenic	-165598	NM_010217	14219	Mm.390287	NM_010217	ENSMUSG00000019997	Ctgf	Ccn2|Fisp12|Hcs24|fisp-12	connective tissue growth factor	protein-coding
unique_peak1-1459-16-1-3.11826364226806-4.46429741251234	chr12	108370983	108371732	+	0	NA	Intergenic	Intergenic	-416823	NR_015512	71033	Mm.159404	NR_015512	ENSMUSG00000085820	4933406K04Rik	4930426M03Rik|4930485I22Rik|4933427G14Rik	RIKEN cDNA 4933406K04 gene	ncRNA
unique_peak1-6235-9-3-1.18961340640422-1.57096726280955	chr7	12977380	12977881	+	0	NA	Intergenic	ORR1C1|LTR|MaLR	-29517	NM_134233	171267	Mm.434341	NM_134233	ENSMUSG00000066803	Vmn1r84	V1rg11	vomeronasal 1 receptor 84	protein-coding
common_peak1-12839-27-46--0.563042900782402-0.849650211186454	chr18	70530463	70531631	+	0	NA	Intergenic	MIR|SINE|MIR	-101061	NM_029019	170461	Mm.83623	NM_029019	ENSMUSG00000079608	Stard6	1700011K09Rik|4833424I06Rik|4933429L05Rik|AI644424	StAR-related lipid transfer (START) domain containing 6	protein-coding
common_peak1-18421-21-10-1.11005764662894-1.59083646988122	chr8	75488950	75489896	+	0	NA	intron (NM_010687, intron 6 of 14)	intron (NM_010687, intron 6 of 14)	-50988	NR_039551	100628574		NR_039551	miRBase:MI0016979	Mir28b	mmu-mir-28b	microRNA 28b	ncRNA
common_peak1-14823-32-21-0.819660400582363-1.49187957593	chr3	90595803	90597288	+	0	NA	Intergenic	Lx|LINE|L1	65717	NM_207263	384997	Mm.316644	NM_207263	ENSMUSG00000042250	Pglyrp4	Gm1478|Gm413	peptidoglycan recognition protein 4	protein-coding
unique_peak1-4097-18-0-4.31291915122835-NA	chr2	72838464	72839142	+	0	NA	Intergenic	Intergenic	-20300	NM_001018042	20687	Mm.124328	NM_011450	ENSMUSG00000027109	Sp3	D130027J01Rik	trans-acting transcription factor 3	protein-coding
unique_peak1-6436-14-4-1.57728806547028-2.4322161449009	chr7	98341493	98342098	+	0	NA	intron (NM_011807, intron 1 of 22)	L1_Mus2|LINE|L1	102499	NM_011807	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
common_peak1-9129-13-8-0.608547029195456-0.660903317613904	chr11	75509987	75510702	+	0	NA	intron (NM_133656, intron 2 of 2)	intron (NM_133656, intron 2 of 2)	17583	NM_001277221	12928	Mm.280125	NM_133656		Crk	Crk-I|Crk-II|Crk-III|Crk3|CrkIII|Crko|c-Crk|p38	v-crk sarcoma virus CT10 oncogene homolog (avian)	protein-coding
unique_peak1-2906-9-5-0.604650905683064-1.21398586181642	chr17	46242070	46242615	+	0	NA	Intergenic	B3A|SINE|B2	-5611	NM_026768	68565	Mm.287443	NM_026768	ENSMUSG00000023967	Mrps18a	1110004O20Rik|C79712	mitochondrial ribosomal protein S18A	protein-coding
common_peak1-18074-32-17-1.10916701777735-2.22933157796382	chr8	33897560	33899096	+	0	NA	Intergenic	Intergenic	162170	NM_001177589	100042715	Mm.291093	NM_001177589		Gm3985	-	predicted gene 3985	protein-coding
common_peak2-23770-18-14-0.406028555619833-0.532159081577619	chr15	98672735	98673339	+	0	NA	intron (NM_001033276, intron 43 of 54)	intron (NM_001033276, intron 43 of 54)	-11098	NM_016781	19082	Mm.6670	NM_016781	ENSMUSG00000067713	Prkag1	AA571379|BB036179|Prkaac	protein kinase, AMP-activated, gamma 1 non-catalytic subunit	protein-coding
common_peak1-17590-41-31-0.70114870484866-1.46742434643227	chr7	43442617	43443836	+	0	NA	Intergenic	Intergenic	3076678	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak1-11993-21-36--0.639964100362715-0.825714541185117	chr17	12916385	12917262	+	0	NA	intron (NM_010515, intron 10 of 47)	intron (NM_010515, intron 10 of 47)	-17354	NR_002853	104103	Mm.26553	NR_002853	ENSMUSG00000078247	Airn	2810051F02Rik|2810434M15Rik|AI256653|AI597500|AW049873|Air|B930018I07Rik|D17Ertd663e|IGF2RAS	antisense Igf2r RNA	ncRNA
unique_peak2-37227-8-10--0.454209200689727-1.078512453669	chr4	88793826	88794346	+	0	NA	intron (NM_024433, intron 1 of 7)	intron (NM_024433, intron 1 of 7)	10812	NM_024433	66902	Mm.28500	NM_024433	ENSMUSG00000062937	Mtap	1300019I21Rik|MSAP	methylthioadenosine phosphorylase	protein-coding
common_peak1-13439-35-16-1.34390741721217-3.08659436536937	chr19	55700340	55701451	+	0	NA	3' UTR (NM_001293685, exon 9 of 9)	3' UTR (NM_001293685, exon 9 of 9)	75799	NR_045318	77594	Mm.329924	NR_045318	ENSMUSG00000097632	4930552P12Rik	-	RIKEN cDNA 4930552P12 gene	ncRNA
unique_peak1-2440-15-7-1.01216475055566-1.08658567012551	chr15	101524823	101525643	+	0	NA	promoter-TSS (NM_008476)	promoter-TSS (NM_008476)	-497	NM_008476	16687	Mm.302399	NM_008476	ENSMUSG00000058354	Krt6a	2310016L08Rik|Krt2-6a|Krt2-6c|MK6a|mK6[a]	keratin 6A	protein-coding
unique_peak2-39786-0-5--3.42509343119537-1.32905871926422	chrX	11022227	11022619	+	0	NA	Intergenic	Intergenic	117475	NM_001114529	236663	Mm.473680	NM_001114529	ENSMUSG00000069038	Gm4906	EG236663	predicted gene 4906	protein-coding
common_peak2-22230-44-42-0.395628079866437-0.796452271284518	chr13	81657584	81658354	+	0	NA	intron (NM_054053, intron 33 of 89)	intron (NM_054053, intron 33 of 89)	114174	NM_054053	110789	Mm.288694	NM_054053	ENSMUSG00000069170	Gpr98	Frings|Mass1|Mgr1|VLGR1	G protein-coupled receptor 98	protein-coding
common_peak2-30483-8-5-0.420259917226415-1.10484139239135	chr7	51914280	51914537	+	0	NA	intron (NM_001271538, intron 2 of 40)	intron (NM_001271538, intron 2 of 40)	6465	NM_001271538	71960	Mm.158289	NM_028021	ENSMUSG00000030739	Myh14	2400004E04Rik|II-C|NHMCII|NMHC II-C	myosin, heavy polypeptide 14	protein-coding
common_peak2-29339-11-21--0.950738034385684-0.991115276827166	chr5	148633020	148633688	+	0	NA	Intergenic	B3|SINE|B2	-38850	NM_025624	66537	Mm.332855	NM_025624	ENSMUSG00000029649	Pomp	2510048O06Rik|Ump1	proteasome maturation protein	protein-coding
common_peak1-11344-10-12--0.344024373132323-0.340565874754526	chr15	88750701	88751194	+	0	NA	intron (NM_172818, intron 8 of 11)	intron (NM_172818, intron 8 of 11)	33901	NM_172818	239591	Mm.86807	NM_172818	ENSMUSG00000022388	Ttll8	1700019P01Rik|4933401B17	tubulin tyrosine ligase-like family, member 8	protein-coding
common_peak1-9710-11-13--0.298661337805991-0.337263207250336	chr12	28751870	28752572	+	0	NA	Intergenic	L1_Mur1|LINE|L1	480981	NM_001177964	68511	Mm.310284	NM_001177964		Dcdc2c	1110015M06Rik	doublecortin domain containing 2C	protein-coding
unique_peak2-36779-8-43--2.45420920068973-6.03134427939003	chr3	75498410	75499653	+	0	NA	Intergenic	RLTR18|LTR|ERVK	-39378	NR_040539	69193	Mm.374088	NR_040539		2410007B07Rik	-	RIKEN cDNA 2410007B07 gene	ncRNA
common_peak1-15968-12-14--0.25811461052088-0.309074325783021	chr5	31575837	31576547	+	0	NA	intron (NR_105788, intron 7 of 7)	B3A|SINE|B2	17295	NM_026298	67661	Mm.293023	NM_026298	ENSMUSG00000038564	Ift172	4930553F24Rik|Slb|avc1|wim	intraflagellar transport 172	protein-coding
common_peak2-30901-37-37-0.278065558042234-0.513362016391488	chr7	142470973	142472462	+	0	NA	Intergenic	L1Md_F2|LINE|L1	11415	NM_001163611	100043254	Mm.192092	NM_001163611	ENSMUSG00000073804	Nps	ENSMUSG00000073804	neuropeptide S	protein-coding
common_peak2-24488-18-16-0.225456309978012-0.397739447719379	chr17	25015240	25015878	+	0	NA	promoter-TSS (NM_008340)	promoter-TSS (NM_008340)	-156	NM_008340	16005	Mm.3135	NM_008340	ENSMUSG00000046070	Igfals	ALS|Albs|mKIAA4111	insulin-like growth factor binding protein, acid labile subunit	protein-coding
common_peak1-18267-53-80--0.198876990468696-0.417582018066374	chr8	34808774	34810449	+	0	NA	TTS (NM_010344)	TTS (NM_010344)	-32775	NM_001167921	68153	Mm.286104	NM_026584	ENSMUSG00000031585	Gtf2e2	34kDa|AI462509|C330006J08Rik	general transcription factor II E, polypeptide 2 (beta subunit)	protein-coding
common_peak1-10996-235-397-0.0854731548617806-0.466766393464885	chr15	36792533	36795020	+	0	NA	Intergenic	Intergenic	-67092	NM_001253806	22631	Mm.3360	NM_011740	ENSMUSG00000022285	Ywhaz	1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	protein-coding
common_peak1-16178-13-32--1.26592208872068-1.87214134458702	chr5	91074361	91075018	+	0	NA	Intergenic	Intergenic	-5176	NM_028478	73246	Mm.30172	NM_028478	ENSMUSG00000029370	Rassf6	1600016B17Rik	Ras association (RalGDS/AF-6) domain family member 6	protein-coding
common_peak2-22697-12-11-0.0638134843664826-0.337263207250336	chr13	99152535	99153116	+	0	NA	Intergenic	MLT1F2|LTR|MaLR	28625	NM_008242	15229	Mm.347441	NM_008242	ENSMUSG00000078302	Foxd1	AI385632|BF-2|FREAC4|Hfh10|Hfhbf2	forkhead box D1	protein-coding
common_peak1-14194-39-25-0.915321528778062-2.02221055290443	chr2	148022087	148023804	+	0	NA	Intergenic	RLTR28|LTR|ERVL	-150240	NM_010446	15376	Mm.938	NM_010446	ENSMUSG00000037025	Foxa2	HNF3-beta|HNF3beta|Hnf-3b|Hnf3b|Tcf-3b|Tcf3b	forkhead box A2	protein-coding
common_peak1-14949-28-89--1.43889397650821-6.09746073171794	chr3	104219414	104220374	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	95885	NM_001025067	269473	Mm.34855	NM_001025067	ENSMUSG00000032913	Lrig2	4632419I10Rik|BB096938	leucine-rich repeats and immunoglobulin-like domains 2	protein-coding
common_peak2-21276-10-7-0.356415345008769-1.12966497611638	chr11	69991152	69991546	+	0	NA	Intergenic	B3|SINE|B2	11224	NM_010796	17312	Mm.252405	NM_010796	ENSMUSG00000000318	Clec10a	CD301a|M-ASGP-BP-1|Mgl|Mgl1	C-type lectin domain family 10, member A	protein-coding
unique_peak1-6819-11-1-2.50869358425161-2.83420869758413	chr8	74979709	74980258	+	0	NA	intron (NM_028170, intron 5 of 7)	MT2_Mm|LTR|ERVL	12204	NM_028170	72254	Mm.30136	NM_028170	ENSMUSG00000052794	1700030K09Rik	-	RIKEN cDNA 1700030K09 gene	protein-coding
common_peak1-13782-25-18-0.613922391901521-0.86528749982161	chr2	37702659	37703698	+	0	NA	intron (NM_146122, intron 18 of 21)	intron (NM_146122, intron 18 of 21)	71409	NM_001163566	241324	Mm.392369	NM_001163566	ENSMUSG00000035403	Crb2	5930402A21|BC043114	crumbs homolog 2 (Drosophila)	protein-coding
unique_peak1-6532-11-2-1.92373108353046-2.32232533660526	chr7	123407022	123407599	+	0	NA	Intergenic	Intergenic	70394	NM_026533	68052	Mm.14798	NM_026533	ENSMUSG00000090862	Rps13	2700063M04Rik	ribosomal protein S13	protein-coding
common_peak2-29294-14-17--0.270708841084668-0.328191099940267	chr5	144222807	144223577	+	0	NA	Intergenic	Intergenic	-2169	NM_144915	231871	Mm.469963	NM_144915	ENSMUSG00000039206	Daglb	E330036I19Rik	diacylglycerol lipase, beta	protein-coding
common_peak2-25855-40-37-0.411048169307513-0.786737236353031	chr19	42612280	42613176	+	0	NA	intron (NM_177464, intron 1 of 6)	B1_Mur1|SINE|Alu	19433	NM_177464	52013	Mm.254169	NM_177464	ENSMUSG00000025184	R3hcc1l	1700036B12Rik|AI450607|C10orf28|D19Ertd386e|GIDRP86|Gidrp88	R3H domain and coiled-coil containing 1 like	protein-coding
common_peak2-28363-34-40-0.0245165223831822-0.311623594475992	chr4	136601931	136602896	+	0	NA	intron (NM_198248, intron 1 of 18)	MIR|SINE|MIR	2197	NM_198248	230848	Mm.31068	NM_198248	ENSMUSG00000060862	Zbtb40	BC059177|C230087D24|Gm571|mKIAA0478	zinc finger and BTB domain containing 40	protein-coding
unique_peak2-38488-4-15--2.02346051385325-2.4322161449009	chr7	34196055	34196718	+	0	NA	Intergenic	Intergenic	38133	NM_001270543	545948	Mm.349644	NM_001270543		Scgb1b20	EG545948|Gm5895	secretoglobin, family 1B, member 20	protein-coding
unique_peak1-7053-11-4-1.18676548936425-1.68134727924692	chr9	90275377	90275888	+	0	NA	Intergenic	URR1A|DNA|MER1_type	-110025	NM_194334	67016	Mm.335347	NM_194334	ENSMUSG00000037410	Tbc1d2b	1810061M12Rik|AI480956|AV021536|AV023399|AW491493|mKIAA1055	TBC1 domain family, member 2B	protein-coding
unique_peak1-755-11-3-1.50869358425161-1.95434855131066	chr10	116260091	116260587	+	0	NA	intron (NM_001033333, intron 10 of 24)	intron (NM_001033333, intron 10 of 24)	73596	NM_001033333	237558	Mm.336386	NM_001033333	ENSMUSG00000034057	Myrfl	Gm239	myelin regulatory factor-like	protein-coding
common_peak2-28444-31-36-0.0157853051841732-0.304004708442489	chr4	150236065	150237135	+	0	NA	intron (NM_133753, intron 1 of 3)	intron (NM_133753, intron 1 of 3)	7400	NM_133753	74155	Mm.318841	NM_133753	ENSMUSG00000028967	Errfi1	1300002F13Rik|AI788755|Mig-6|Mig6|RALT	ERBB receptor feedback inhibitor 1	protein-coding
unique_peak2-34124-5-15--1.70438033600585-1.4372489031793	chr13	21787481	21788185	+	0	NA	Intergenic	Intergenic	-7039	NM_001011820	258067	Mm.453831	NM_001011820	ENSMUSG00000096404	Olfr1359	MOR256-35|MOR256-60	olfactory receptor 1359	protein-coding
common_peak1-8764-40-38-0.373573463888849-0.714844670794617	chr11	5954768	5956530	+	0	NA	intron (NM_001174053, intron 1 of 19)	intron (NM_001174053, intron 1 of 19)	10102	NM_001174054	12323	Mm.439733	NM_007595	ENSMUSG00000057897	Camk2b	Camk2d	calcium/calmodulin-dependent protein kinase II, beta	protein-coding
common_peak2-20533-22-38--0.638118113774844-0.887741995158868	chr10	63243758	63244476	+	0	NA	intron (NM_001164376, intron 5 of 17)	L1Md_F2|LINE|L1	-39686	NM_001164519	216033	Mm.444692	NM_177612	ENSMUSG00000060843	Ctnna3	4930429L08Rik|4933408A16|Catna3|Vr22	catenin (cadherin associated protein), alpha 3	protein-coding
unique_peak1-1886-9-4-0.867685311516858-1.36011389749466	chr14	62990632	62991155	+	0	NA	intron (NM_026001, intron 10 of 10)	intron (NM_026001, intron 10 of 10)	39951	NM_026001	67153	Mm.26040	NM_026001	ENSMUSG00000021932	Rnaseh2b	1110019N06Rik|2610207P08Rik|Dleu8	ribonuclease H2, subunit B	protein-coding
common_peak2-30054-24-51--0.907229815373375-1.77636329975052	chr6	128225111	128226069	+	0	NA	intron (NM_001080979, intron 1 of 10)	intron (NM_001080979, intron 1 of 10)	25241	NM_001080979	21679	Mm.14774	NM_011567	ENSMUSG00000030353	Tead4	ETFR-2|Etfr2|FR-19|Rtef1|TEAD-4|TEF-3|Tcf13r1|Tef3|Tefr|Tefr1|Tefr1a	TEA domain family member 4	protein-coding
common_peak1-18645-11-5-0.923731083530457-1.477227296591	chr8	111537158	111537705	+	0	NA	Intergenic	Intergenic	76671	NR_037295	100526511		NR_037295		Mir3108	mmu-mir-3108	microRNA 3108	ncRNA
common_peak1-11445-54-13-2.36573083957213-10.0971742644277	chr15	101077383	101078872	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-19150	NM_010444	15370	Mm.119	NM_010444	ENSMUSG00000023034	Nr4a1	GFRP1|Gfrp|Hbr-1|Hbr1|Hmr|N10|NGFI-B|NGFIB|NP10|TIS1|TR3|nur77	nuclear receptor subfamily 4, group A, member 1	protein-coding
unique_peak2-32833-4-5--0.608423014574403-0.909929411522249	chr1	191574995	191575398	+	0	NA	intron (NM_008976, intron 1 of 18)	(TG)n|Simple_repeat|Simple_repeat	23049	NM_008976	19250	Mm.4498	NM_008976	ENSMUSG00000026604	Ptpn14	C130080N23Rik|OTTMUSG00000022087|PTP36	protein tyrosine phosphatase, non-receptor type 14	protein-coding
common_peak2-30367-1-5--2.2120195109379-1.32905871926422	chr7	28571134	28571562	+	0	NA	Intergenic	RLTR13D3|LTR|ERVK	20656	NR_033484	100043229	Mm.458666	NR_033484		Gm10046	ENSMUSG00000058661	predicted gene 10046	ncRNA
unique_peak2-37614-11-10-0.0492619656143161-0.31137425193576	chr5	64588060	64588746	+	0	NA	intron (NM_019636, intron 2 of 19)	intron (NM_019636, intron 2 of 19)	-33193	NM_001289514	57915	Mm.286353	NM_019636	ENSMUSG00000029174	Tbc1d1	1110062G02Rik|AI385682|AW555803|Tbc1|mKIAA1108	TBC1 domain family, member 1	protein-coding
common_peak2-27049-13-17--0.391452970804544-0.364171515310935	chr2	180582743	180583474	+	0	NA	Intergenic	Intergenic	-45637	NR_029538	723951		NR_029538		Mir124a-3	Mirn124a-3|mir-124a-3	microRNA 124a-3	ncRNA
unique_peak2-37152-4-6--0.830815435910851-0.989110657569874	chr4	40837817	40838273	+	0	NA	Intergenic	MT2B|LTR|ERVL	-29044	NM_011463	20731	Mm.25246	NM_011463	ENSMUSG00000028415	Spink4	MPGC60	serine peptidase inhibitor, Kazal type 4	protein-coding
common_peak2-19844-35-27-0.6240153364049-1.10223211335955	chr1	91041811	91042692	+	0	NA	exon (NM_133816, exon 4 of 6)	exon (NM_133816, exon 4 of 6)	47876	NR_106129	102465771		NR_106129		Mir7669	mmu-mir-7669	microRNA mir-7669	ncRNA
unique_peak2-36557-5-5--0.289342836727009-0.909929411522249	chr2	167959172	167959578	+	0	NA	Intergenic	Intergenic	20638	NR_040327	77017	Mm.407822	NR_040327	ENSMUSG00000087648	E130018N17Rik	-	RIKEN cDNA E130018N17 gene	ncRNA
common_peak1-7642-27-41--0.400771471883525-0.542588322087496	chr1	71556742	71557652	+	0	NA	Intergenic	Intergenic	-46533	NM_026195	108147	Mm.38010	NM_026195	ENSMUSG00000026192	Atic	2610509C24Rik|AA536954|AW212393	5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase	protein-coding
common_peak1-10667-9-13--0.617741515653384-0.459837087125828	chr14	51063469	51064052	+	0	NA	Intergenic	MLT1A0|LTR|MaLR	-8969	NM_146667	258661	Mm.377624	NM_146667	ENSMUSG00000095917	Olfr740	MOR106-4	olfactory receptor 740	protein-coding
unique_peak2-38277-4-6--0.830815435910851-0.989110657569874	chr6	131292076	131292492	+	0	NA	Intergenic	Intergenic	-28439	NM_172891	243659	Mm.20114	NM_172891	ENSMUSG00000032899	Styk1	9130025L13|AI326477|Nok	serine/threonine/tyrosine kinase 1	protein-coding
unique_peak1-6261-7-3-0.799090830298189-1.23214870625617	chr7	19935972	19936442	+	0	NA	intron (NM_001127324, intron 5 of 6)	intron (NM_001127324, intron 5 of 6)	5787	NM_007948	13870	Mm.280913	NM_007948	ENSMUSG00000003549	Ercc1	Ercc-1	excision repair cross-complementing rodent repair deficiency, complementation group 1	protein-coding
unique_peak2-33904-4-10--1.48289213249054-1.5150158574804	chr12	54777847	54778400	+	0	NA	intron (NM_013780, intron 4 of 11)	intron (NM_013780, intron 4 of 11)	428459	NM_013780	27386	Mm.247044	NM_013780	ENSMUSG00000021010	Npas3	4930423H22Rik|bHLHe12	neuronal PAS domain protein 3	protein-coding
common_peak2-24294-10-10--0.103016273628528-0.301029995663987	chr17	22314837	22315339	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-12144	NM_177596	210853	Mm.441622	NM_177596	ENSMUSG00000063383	Zfp947	6720451E15|EG210853|Gm4769	zinc finger protein 947	protein-coding
common_peak1-14448-18-12-0.612479433087259-0.739965416525508	chr3	57409488	57410436	+	0	NA	Intergenic	RLTR42|LTR|ERVK	-30130	NM_001168281	97064	Mm.405029	NM_133784	ENSMUSG00000027803	Wwtr1	2310058J06Rik|2610021I22Rik|C78399|Taz	WW domain containing transcription regulator 1	protein-coding
common_peak2-26708-6-4-0.24347001549294-0.989110657569874	chr2	128471001	128471295	+	0	NA	intron (NM_008569, intron 26 of 47)	intron (NM_008569, intron 26 of 47)	41983	NM_008569	17222	Mm.277408	NM_008569	ENSMUSG00000014355	Anapc1	2610021O03Rik|AI047775|AI853536|AW547281|Apc1|Mcpr|tsg24	anaphase promoting complex subunit 1	protein-coding
unique_peak1-5782-12-4-1.32684789020028-2.04196296489515	chr6	54355173	54355781	+	0	NA	intron (NR_033635, intron 1 of 13)	BGLII_B|LTR|ERVK	24738	NR_033635	100042056	Mm.448157	NM_198118	ENSMUSG00000073067	9130019P16Rik	6430501H15Rik|OTTMUSG00000023151	RIKEN cDNA 9130019P16 gene	ncRNA
unique_peak2-36707-7-8--0.370834171144123-1.00793137938329	chr3	51209963	51210437	+	0	NA	intron (NM_025523, intron 3 of 3)	B4A|SINE|B4	2677	NM_025523	66377	Mm.331007	NM_025523		Ndufc1	2310016K22Rik|KFYI	NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1	protein-coding
common_peak2-32105-10-17--0.813509656433543-0.699649909729472	chr9	99701464	99702199	+	0	NA	Intergenic	Intergenic	74758	NM_011440	20669	Mm.261595	NM_011440	ENSMUSG00000053747	Sox14	-	SRY (sex determining region Y)-box 14	protein-coding
unique_peak2-38316-4-14--1.93035110946177-2.23384849113406	chr6	145507897	145508634	+	0	NA	Intergenic	Lx6|LINE|L1	-56218	NM_009449	22147	Mm.270295	NM_009449	ENSMUSG00000067338	Tuba3b	M[a]7|Tuba7	tubulin, alpha 3B	protein-coding
common_peak2-31017-8-8--0.164702583494742-1.00793137938329	chr8	11337944	11338377	+	0	NA	intron (NM_009932, intron 3 of 47)	intron (NM_009932, intron 3 of 47)	25331	NM_009932	12827	Mm.181021	NM_009932	ENSMUSG00000031503	Col4a2	Col4a-2	collagen, type IV, alpha 2	protein-coding
common_peak2-27380-297-346-0.691536195321328-11.3816842778111	chr3	87149130	87152914	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-10781	NM_009690	11801	Mm.6676	NM_009690	ENSMUSG00000015854	Cd5l	1/6|AAC-11|AI047839|Api6|CT2|Pdp|Sp-alpha	CD5 antigen-like	protein-coding
unique_peak1-5281-15-4-1.69023665566829-1.97518968347063	chr5	66075311	66076104	+	0	NA	intron (NM_001081321, intron 2 of 31)	intron (NM_001081321, intron 2 of 31)	13388	NM_001081321	71521	Mm.278974	NM_027818	ENSMUSG00000029202	Pds5a	9030416H16Rik|E230024D05Rik|mKIAA0648	PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	protein-coding
common_peak1-14599-52-133--0.957829200192073-4.78096800106317	chr3	51415906	51416927	+	0	NA	Intergenic	GA-rich|Low_complexity|Low_complexity	-48699	NM_174995	211666	Mm.24679	NM_174995	ENSMUSG00000074604	Mgst2	GST2|MGST-II	microsomal glutathione S-transferase 2	protein-coding
common_peak1-12415-47-29-1.02795082915803-2.82656563060959	chr17	74315523	74317240	+	0	NA	Intergenic	Lx4B|LINE|L1	-16845	NM_011723	22436	Mm.11223	NM_011723	ENSMUSG00000024066	Xdh	XO|Xor|Xox-1|Xox1	xanthine dehydrogenase	protein-coding
unique_peak2-37279-3-6--1.22133801201688-1.08602067057793	chr4	116557141	116557522	+	0	NA	intron (NM_001029912, intron 1 of 13)	PB1|SINE|Alu	7324	NM_001029912	74464	Mm.218946	NM_001029912	ENSMUSG00000033948	Zswim5	4933426E21Rik|AI503093|mKIAA1511	zinc finger SWIM-type containing 5	protein-coding
common_peak2-30465-29-19-0.790361985727748-1.34608670144205	chr7	45873222	45873992	+	0	NA	Intergenic	Intergenic	646297	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak1-12028-18-28--0.54506184389922-0.591915184368642	chr17	17179213	17179954	+	0	NA	Intergenic	L1_Mur2|LINE|L1	-21484	NM_001005358	449000	Mm.483718	NM_001005358	ENSMUSG00000096696	Zfp960	-	zinc finger protein 960	protein-coding
common_peak2-24402-88-199--0.628443780604192-3.57008267015371	chr17	14960622	14962248	+	0	NA	intron (NM_175173, intron 24 of 24)	intron (NM_175173, intron 24 of 24)	118694	NM_175173	71682	Mm.122698	NM_175173	ENSMUSG00000046991	Wdr27	0610012K18Rik	WD repeat domain 27	protein-coding
common_peak1-11730-48-65--0.0734669681236388-0.3078161230877	chr16	33380184	33381510	+	0	NA	promoter-TSS (NM_011749)	promoter-TSS (NM_011749)	-14	NM_011749	22661	Mm.392667	NM_011749	ENSMUSG00000022811	Zfp148	2210405J08Rik|AI480666|AW045217|BERF-1|BFCOL1|ZBP-89|Znf148	zinc finger protein 148	protein-coding
unique_peak2-39381-7-5-0.214128329577033-1.01466476204226	chr9	21367058	21367576	+	0	NA	intron (NM_153141, intron 1 of 14)	PB1|SINE|Alu	15979	NM_153141	59035	Mm.178115	NM_021531	ENSMUSG00000032185	Carm1	Prmt4	coactivator-associated arginine methyltransferase 1	protein-coding
common_peak2-25037-20-34--0.641208232353773-0.863762398024911	chr18	25754035	25754520	+	0	NA	intron (NM_001146294, intron 2 of 12)	intron (NM_001146294, intron 2 of 12)	158207	NM_133195	108013	Mm.266435	NM_133195	ENSMUSG00000024268	Celf4	A230070D14Rik|BRUNOL-4|Brul4|Brunol4|C130060B05Rik	CUGBP, Elav-like family member 4	protein-coding
common_peak1-18880-11-13--0.298661337805991-0.337263207250336	chr9	28289653	28290197	+	0	NA	intron (NM_177906, intron 2 of 7)	intron (NM_177906, intron 2 of 7)	691071	NM_177906	330908	Mm.379474	NM_177906	ENSMUSG00000062257	Opcml	2900075O15Rik|3732419F12|AI844366|B930023M13Rik|C230027C17|Gm181|Obcam	opioid binding protein/cell adhesion molecule-like	protein-coding
common_peak1-15388-9-24--1.4542427833705-1.83731222263754	chr4	70535167	70535677	+	0	NA	Intergenic	L1Md_F3|LINE|L1	-339460	NM_172694	230316	Mm.251188	NM_172694		Megf9	4933405H16Rik|9630025C07|Egfl5|mKIAA0818	multiple EGF-like-domains 9	protein-coding
common_peak1-17384-81-119--0.0348409925999533-0.30471050143041	chr7	130645333	130647685	+	0	NA	Intergenic	L1MC5|LINE|L1	-2546	NM_001081329	210162	Mm.135397	NM_175435	ENSMUSG00000030757	Zkscan2	9430065N20Rik|AW493225|Zfp694	zinc finger with KRAB and SCAN domains 2	protein-coding
common_peak2-30767-14-17--0.270708841084668-0.328191099940267	chr7	124458933	124459396	+	0	NA	Intergenic	Intergenic	-65329	NM_175645	233781	Mm.461427	NM_175645	ENSMUSG00000030657	Xylt1	8030490L12	xylosyltransferase 1	protein-coding
common_peak2-25516-28-17-0.88303411837915-1.43262124146305	chr19	5724820	5725822	+	0	NA	intron (NM_001114595, intron 1 of 17)	intron (NM_001114595, intron 1 of 17)	996	NM_001114595	114601	Mm.210447	NM_053252	ENSMUSG00000024937	Ehbp1l1	G430002G23Rik	EH domain binding protein 1-like 1	protein-coding
common_peak2-24966-25-19-0.539921810457743-0.756750750680359	chr18	5427666	5428538	+	0	NA	Intergenic	Intergenic	-93665	NM_178722	240186	Mm.118257	NM_178722	ENSMUSG00000050945	Zfp438	9430031G09|9430091M14Rik|B830013J05Rik	zinc finger protein 438	protein-coding
common_peak2-22015-9-27--1.61774151565338-2.34622402919155	chr12	57230431	57230916	+	0	NA	Intergenic	Lx3B|LINE|L1	-123557	NR_045048	100503961	Mm.136732	NR_045048		Gm19990	-	predicted gene, 19990	ncRNA
common_peak2-26875-30-42--0.256589345210225-0.401350871931209	chr2	156311814	156312559	+	0	NA	intron (NM_001006664, intron 1 of 21)	intron (NM_001006664, intron 1 of 21)	10916	NM_001006664	13821	Mm.20852	NM_013510	ENSMUSG00000027624	Epb4.1l1	4.1N|Epb41l1|NBL1|mKIAA0338	erythrocyte protein band 4.1-like 1	protein-coding
common_peak1-14308-87-123-0.0414407953942941-0.322659637555749	chr2	162930872	162932206	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-16202	NM_026630	68236	Mm.33648	NM_026630		Gtsf1l	2410116G06Rik	gametocyte specific factor 1-like	protein-coding
common_peak1-13115-11-13--0.298661337805991-0.337263207250336	chr19	8898117	8898691	+	0	NA	intron (NM_001081196, intron 4 of 13)	B1_Mus2|SINE|Alu	4513	NM_001081196	68693	Mm.476519	NM_001081196	ENSMUSG00000071659	Hnrnpul2	1110031M08Rik|AI465155|Hnrpul2	heterogeneous nuclear ribonucleoprotein U-like 2	protein-coding
unique_peak1-447-6-7--0.434601889619698-0.97990265578305	chr1	166047900	166048404	+	0	NA	intron (NM_011347, intron 1 of 15)	intron (NM_011347, intron 1 of 15)	2757	NM_011347	20344	Mm.3337	NM_011347	ENSMUSG00000026580	Selp	CD62P|GMP-140|Grmp|LECAM3|PADGEM	selectin, platelet	protein-coding
common_peak1-12701-24-27--0.0141450192898871-0.304978344874324	chr18	44473037	44474153	+	0	NA	Intergenic	RSINE1|SINE|B4	-20133	NM_001033621	58916	Mm.143804	NM_001033621	ENSMUSG00000024471	Myot	5530402I04Rik|Ttid	myotilin	protein-coding
unique_peak1-1981-8-5-0.420259917226415-1.10484139239135	chr14	121824114	121824648	+	0	NA	Intergenic	Intergenic	-45929	NM_145465	223255	Mm.390756	NM_145465	ENSMUSG00000063410	Stk24	1810013H02Rik|C76483|MST-3|Mst3|STE20	serine/threonine kinase 24	protein-coding
unique_peak1-187-10-2-1.77145284428761-2.09384600808989	chr1	75400046	75400690	+	0	NA	3' UTR (NM_001085371, exon 11 of 11)	3' UTR (NM_001085371, exon 11 of 11)	3708	NM_001173477	11790	Mm.275397	NM_007463	ENSMUSG00000026207	Speg	AW125581|Apeg1|BPEG|D1Bwg1450e|SPEGalpha|SPEGbeta|mKIAA1297	SPEG complex locus	protein-coding
unique_peak1-528-14-1-2.89921616035764-3.91338994363176	chr1	184870185	184870806	+	0	NA	Intergenic	Intergenic	-14424	NM_016928	53791	Mm.116894	NM_016928	ENSMUSG00000079164	Tlr5	-	toll-like receptor 5	protein-coding
common_peak2-28567-9-17--0.980311595038092-0.844317084070804	chr5	5748901	5749352	+	0	NA	intron (NM_027399, intron 1 of 4)	CpG	191	NM_027399	70358	Mm.85429	NM_027399	ENSMUSG00000015652	Steap1	2410007B19Rik|Prss24|Steap	six transmembrane epithelial antigen of the prostate 1	protein-coding
common_peak1-16969-51-57-0.216942830475001-0.476339052167849	chr6	86437874	86439438	+	0	NA	promoter-TSS (NR_040293)	promoter-TSS (NR_040293)	-435	NR_040292	381792	Mm.333223	NR_040292		2310040G24Rik	-	RIKEN cDNA 2310040G24 gene	ncRNA
common_peak1-11235-139-196-0.186164548059823-0.706672300139681	chr15	79545453	79547527	+	0	NA	intron (NM_013818, intron 7 of 11)	intron (NM_013818, intron 7 of 11)	25164	NM_013818	14904	Mm.19080	NM_013818	ENSMUSG00000042535	Gtpbp1	AL022987|AW045683|C85212|GP-1|Gtpbp	GTP binding protein 1	protein-coding
unique_peak1-4671-11-6-0.701338662194009-1.32595962126035	chr3	93541125	93541760	+	0	NA	Intergenic	MTB_Mm|LTR|MaLR	-58878	NM_207272	399675	Mm.377924	NM_207272	ENSMUSG00000060256	Tdpoz4	-	TD and POZ domain containing 4	protein-coding
common_peak1-12160-41-74--0.52766998564722-1.1394418936145	chr17	28951876	28953418	+	0	NA	intron (NM_001081315, intron 4 of 12)	intron (NM_001081315, intron 4 of 12)	14576	NM_001081315	268936	Mm.291877	NM_199061	ENSMUSG00000063952	Brpf3	AI413466|AW493400|mKIAA1286	bromodomain and PHD finger containing, 3	protein-coding
common_peak1-19339-45-38-0.574955806482623-1.21247150569676	chrX	7429648	7431437	+	0	NA	intron (NM_001290536, intron 1 of 8)	intron (NM_001290536, intron 1 of 8)	11334	NM_001290537	54644	Mm.142827	NM_138604	ENSMUSG00000031154	Otud5	AA407879|AI553596|BB114028|DUBA|DXImx46e|Sfc7	OTU domain containing 5	protein-coding
common_peak2-20039-18-16-0.225456309978012-0.397739447719379	chr1	138928390	138929012	+	0	NA	Intergenic	Intergenic	-71676	NM_030676	26424	Mm.16794	NM_030676	ENSMUSG00000026398	Nr5a2	AU020803|D1Ertd308e|Ftf|LRH-1|UF2-H3B	nuclear receptor subfamily 5, group A, member 2	protein-coding
common_peak1-16498-17-17-0.0483713367627256-0.325169893479371	chr5	139200517	139201370	+	0	NA	Intergenic	Intergenic	-30092	NM_030565	80752	Mm.320355	NM_030565	ENSMUSG00000025854	Fam20c	C76981|DMP-4|DMP4|GEF-CK|mKIAA4081	family with sequence similarity 20, member C	protein-coding
unique_peak1-3215-8-4-0.683294323060208-1.21878474469819	chr18	57777756	57778301	+	0	NA	intron (NM_029290, intron 5 of 6)	intron (NM_029290, intron 5 of 6)	20211	NR_045360	70157	Mm.490532	NR_045360		2210409D07Rik	-	RIKEN cDNA 2210409D07 gene	ncRNA
unique_peak2-32507-2-6--1.72480917832092-1.26211192963361	chr1	51747637	51747883	+	0	NA	Intergenic	Intergenic	-212517	NM_028696	109019	Mm.196290	NM_028696	ENSMUSG00000026107	Nabp1	4930434H03Rik|4930442A21Rik|4930488J04Rik|4933440J18Rik|5830411E10Rik|AI852561|Nbp1|Obfc2a|Ssb2	nucleic acid binding protein 1	protein-coding
common_peak2-27488-14-11-0.314253659636488-0.435191258261915	chr3	94718571	94719213	+	0	NA	Intergenic	MTD|LTR|MaLR	-18113	NM_009150	20341	Mm.196558	NM_009150	ENSMUSG00000068874	Selenbp1	Lp56|Lpsb|SBP56	selenium binding protein 1	protein-coding
unique_peak2-36120-8-7-0.00522241794757061-1.00793137938329	chr2	5174106	5174486	+	0	NA	Intergenic	MusHAL1|LINE|L1	115474	NM_028804	74186	Mm.274715	NM_028804	ENSMUSG00000026676	Ccdc3	2310045O21Rik	coiled-coil domain containing 3	protein-coding
common_peak2-30542-90-134--0.022510571108679-0.301843283111981	chr7	70359518	70361771	+	0	NA	Intergenic	Intergenic	-3232	NM_007390	11441	Mm.113464	NM_007390	ENSMUSG00000030525	Chrna7	Acra7|alpha7	cholinergic receptor, nicotinic, alpha polypeptide 7	protein-coding
common_peak1-12241-8-6-0.197867495889966-1.03789460276074	chr17	35634633	35635048	+	0	NA	Intergenic	Intergenic	-8137	NM_013633	18999	Mm.17031	NM_013633	ENSMUSG00000024406	Pou5f1	NF-A3|Oct-3|Oct-3/4|Oct-4|Oct3|Oct3/4|Oct4|Otf-3|Otf-4|Otf3|Otf3-rs7|Otf3g|Otf4	POU domain, class 5, transcription factor 1	protein-coding
common_peak2-26755-16-5-1.53330114154691-1.80287260729378	chr2	137419594	137420044	+	0	NA	Intergenic	Lx9|LINE|L1	-477563	NM_013822	16449	Mm.22398	NM_013822	ENSMUSG00000027276	Jag1	ABE2|Gsfabe2|Htu|Ozz|Ser-1	jagged 1	protein-coding
unique_peak1-4777-8-5-0.420259917226415-1.10484139239135	chr3	126568627	126569139	+	0	NA	Intergenic	L1Md_F2|LINE|L1	77421	NM_001034168	109676	Mm.220242	NM_178655	ENSMUSG00000032826	Ank2	AI835472|AW491075|Ank-2	ankyrin 2, brain	protein-coding
common_peak2-20283-16-17--0.0516613591742505-0.301029995663984	chr1	191453823	191454522	+	0	NA	Intergenic	Intergenic	57793	NM_001081363	108000	Mm.129746	NM_001081363	ENSMUSG00000026605	Cenpf	6530404A22Rik|AI325968|CENF|Lek1|PRO1779|mitosin	centromere protein F	protein-coding
unique_peak1-5188-11-2-1.92373108353046-2.32232533660526	chr5	32031995	32032643	+	0	NA	intron (NM_181281, intron 2 of 10)	L2|LINE|L2	31896	NM_181282	107976	Mm.482126	NM_144541	ENSMUSG00000052139	Bre	6030405P19Rik|AI429776|B830038C02Rik	brain and reproductive organ-expressed protein	protein-coding
common_peak1-10823-49-37-0.758356309581599-1.88758293112676	chr14	101653347	101654419	+	0	NA	Intergenic	L1_Mur1|LINE|L1	-54597	NM_029680	76627	Mm.31415	NM_029680	ENSMUSG00000042888	Prr30	1700110M21Rik	proline rich 30	protein-coding
common_peak1-8115-9-6-0.382258484346616-1.11707584880836	chr1	184066297	184066814	+	0	NA	Intergenic	Intergenic	11687	NM_012058	27058	Mm.303071	NM_012058	ENSMUSG00000026511	Srp9	9kDa	signal recognition particle 9	protein-coding
common_peak2-31339-9-10--0.269818212233077-1.05503135781948	chr8	83996487	83996980	+	0	NA	intron (NM_001297596, intron 2 of 24)	intron (NM_001297596, intron 2 of 24)	130272	NM_001297593	234515	Mm.324468	NM_001024617	ENSMUSG00000037940	Inpp4b	E130107I17Rik	inositol polyphosphate-4-phosphatase, type II	protein-coding
unique_peak1-2035-11-3-1.50869358425161-1.95434855131066	chr15	25394460	25394982	+	0	NA	Intergenic	Intergenic	50774	NR_027376	432939	Mm.146555	NM_001013791		Gm5468	100040583|EG432939	predicted gene 5468	ncRNA
common_peak1-14151-22-34--0.481998911857562-0.600314449189972	chr2	132247464	132248523	+	0	NA	Intergenic	Intergenic	-2484	NR_045802	70845	Mm.158461	NR_045802	ENSMUSG00000027345	4921508D12Rik	-	RIKEN cDNA 4921508D12 gene	ncRNA
common_peak1-19320-25-16-0.774387064094767-1.1282783422172	chr9	123284787	123285691	+	0	NA	intron (NM_153168, intron 2 of 20)	MTEa|LTR|MaLR	9181	NM_153168	102436	Mm.276076	NM_153168	ENSMUSG00000035202	Lars2	AI035546|Kiaa0028|LEURS	leucyl-tRNA synthetase, mitochondrial	protein-coding
common_peak1-18926-10-12--0.344024373132323-0.340565874754526	chr9	44964956	44965588	+	0	NA	Intergenic	MLT1A1|LTR|MaLR	18147	NM_001013390	399548	Mm.335112	NM_001013390	ENSMUSG00000046480	Scn4b	Gm1471	sodium channel, type IV, beta	protein-coding
common_peak1-14119-60-45-0.830729905563518-2.67606589893832	chr2	128686528	128687879	+	0	NA	Intergenic	MTEa|LTR|MaLR	-2465	NM_024237	70370	Mm.5107	NM_024237	ENSMUSG00000027386	Fbln7	1600015H20Rik|AI464334|TM14	fibulin 7	protein-coding
common_peak1-9855-10-7-0.356415345008769-1.12966497611638	chr12	80211709	80212392	+	0	NA	Intergenic	Intergenic	-7124	NR_110486	321017	Mm.311575	NR_110486		9230116L04Rik	-	RIKEN cDNA 9230116L04 gene	ncRNA
unique_peak1-1531-8-2-1.42025991722641-1.65811743852845	chr13	15863188	15863692	+	0	NA	Intergenic	Intergenic	31023	NR_045507	71071	Mm.380845	NR_045507		4933412O06Rik	-	RIKEN cDNA 4933412O06 gene	ncRNA
common_peak1-7659-22-8-1.47735910364509-2.29727994934156	chr1	74389675	74390386	+	0	NA	intron (NM_019999, intron 1 of 8)	intron (NM_019999, intron 1 of 8)	10846	NM_019999	56695	Mm.384726	NM_019999	ENSMUSG00000026179	Pnkd	2210013N15Rik|2810403H05Rik|AI854243|Brp17|MNCb-5687|MR-1|Tahccp2	paroxysmal nonkinesiogenic dyskinesia	protein-coding
common_peak2-24863-9-10--0.269818212233077-1.05503135781948	chr17	78882255	78882552	+	0	NA	Intergenic	Intergenic	-25000	NM_001197028	74199	Mm.292983	NM_028813	ENSMUSG00000024076	Vit	1700052E02Rik|1700110E08Rik|2810429K11Rik	vitrin	protein-coding
common_peak2-21535-36-45--0.0442408698892587-0.301029995663982	chr11	95712798	95713768	+	0	NA	Intergenic	Intergenic	-6848	NR_045187	73906	Mm.399894	NR_045187	ENSMUSG00000086015	4833417C18Rik	-	RIKEN cDNA 4833417C18 gene	ncRNA
unique_peak1-668-17-7-1.21829633820504-1.55050753388977	chr10	61695386	61696145	+	0	NA	Intergenic	LTR82A|LTR|ERVL	-1799	NM_197996	70423	Mm.416781	NM_197996	ENSMUSG00000037031	Tspan15	1110036D12Rik|2700063A19Rik|AW048364|Tm4sf15	tetraspanin 15	protein-coding
common_peak2-21925-5-17--1.87430533744817-1.80287260729378	chr12	17738885	17739355	+	0	NA	intron (NM_016677, intron 1 of 3)	intron (NM_016677, intron 1 of 3)	41500	NM_016677	53602	Mm.313619	NM_016677	ENSMUSG00000071379	Hpcal1	NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3	hippocalcin-like 1	protein-coding
unique_peak1-5181-5-2-0.710657163272991-1.08602067057793	chr5	30852142	30852550	+	0	NA	Intergenic	L1MB7|LINE|L1	-4137	NM_028483	73259	Mm.443299	NM_028483	ENSMUSG00000053194	Cib4	1700041E20Rik	calcium and integrin binding family member 4	protein-coding
unique_peak2-38727-6-14--1.34149248522822-1.01572999746118	chr7	112267574	112268038	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-2167	NM_207557	404318	Mm.377938	NM_207557	ENSMUSG00000095248	Olfr681	MOR4014	olfactory receptor 681	protein-coding
unique_peak2-39496-6-10--0.894033508256995-1.21398586181642	chr9	59656458	59656964	+	0	NA	intron (NM_173018, intron 8 of 43)	AT_rich|Low_complexity|Low_complexity	57730	NM_173018	270163	Mm.249545	NM_173018	ENSMUSG00000039585	Myo9a	4732465J09Rik|C130068I12Rik|C230003M11	myosin IXa	protein-coding
common_peak2-30141-12-8-0.478850983645327-0.562038191119709	chr6	145111233	145111679	+	0	NA	intron (NM_001281980, intron 11 of 18)	B1_Mus1|SINE|Alu	41197	NM_008511	16970	Mm.843	NM_008511	ENSMUSG00000030263	Lrmp	D6Int3|D6Int4|D6Int5|D6Int7|D6Int8|Jaw1	lymphoid-restricted membrane protein	protein-coding
common_peak2-28283-23-25-0.0213277863679888-0.30528805757448	chr4	129794807	129795508	+	0	NA	intron (NM_026441, intron 1 of 4)	RLTR25B|LTR|ERVK	10357	NM_026441	67898	Mm.20818	NM_026441	ENSMUSG00000028779	Pef1	2600002E23Rik|Peflin	penta-EF hand domain containing 1	protein-coding
common_peak1-17764-27-15-0.991545950895236-1.66700866096458	chr7	90284844	90285957	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-165499	NR_045855	71285	Mm.76818	NR_045855		4933430H16Rik	-	RIKEN cDNA 4933430H16 gene	ncRNA
common_peak1-11612-12-4-1.32684789020028-2.04196296489515	chr16	18088697	18089191	+	0	NA	intron (NM_011172, intron 1 of 13)	CpG	339	NM_011172	19125	Mm.28456	NM_011172	ENSMUSG00000003526	Prodh	Pro-1|Pro1|Ym24d07	proline dehydrogenase	protein-coding
common_peak1-8687-16-15-0.118263642268062-0.328191099940264	chr11	43433462	43434283	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-18808	NM_008375	16204	Mm.142716	NM_008375	ENSMUSG00000020405	Fabp6	GT|I-15P|I-BABP|ILBP|ILBP3|Illbp	fatty acid binding protein 6, ileal (gastrotropin)	protein-coding
unique_peak1-1221-7-2-1.21412832957703-1.45399745587252	chr11	108283605	108284114	+	0	NA	Intergenic	Intergenic	-2721	NM_029606	76380	Mm.344071	NM_029586	ENSMUSG00000020728	Cep112	1700001M19Rik|1700029K01Rik|8430407H02Rik|AV043680|AV207351|Ccdc46|Macoco	centrosomal protein 112	protein-coding
common_peak1-13013-14-20--0.493101262421116-0.456667090758524	chr19	5041242	5041962	+	0	NA	TTS (NM_175383)	TTS (NM_175383)	198	NM_134155	107392	Mm.29628	NM_134155	ENSMUSG00000080268	Brms1	AV003220|AW554636	breast cancer metastasis-suppressor 1	protein-coding
unique_peak1-241-8-1-2.00522241794757-2.05605744720049	chr1	90875896	90876440	+	0	NA	Intergenic	B3A|SINE|B2	-36520	NR_040471	73475	Mm.491040	NR_040471		1700067G17Rik	-	RIKEN cDNA 1700067G17 gene	ncRNA
unique_peak2-38830-6-7--0.434601889619698-0.97990265578305	chr7	141414309	141414860	+	0	NA	intron (NM_007400, intron 1 of 22)	intron (NM_007400, intron 1 of 22)	2196	NM_007400	11489	Mm.439714	NM_007400	ENSMUSG00000054555	Adam12	Mltna|mKIAA4001	a disintegrin and metallopeptidase domain 12 (meltrin alpha)	protein-coding
unique_peak2-34617-5-5--0.289342836727009-0.909929411522249	chr14	76504105	76504437	+	0	NA	intron (NM_026177, intron 3 of 7)	intron (NM_026177, intron 3 of 7)	6351	NM_026177	67467	Mm.260767	NM_026177	ENSMUSG00000022008	Gpalpp1	1200011I18Rik|Kiaa1704	GPALPP motifs containing 1	protein-coding
unique_peak2-39424-5-13--1.51173525806346-1.78669045979184	chr9	42123636	42124296	+	0	NA	Intergenic	RMER1B|Other|Other	-51583	NM_172769	235293	Mm.32700	NM_172769	ENSMUSG00000032018	Sc5d	A830037K02|A830073K23Rik|Sc5dl	sterol-C5-desaturase (fungal ERG3, delta-5-desaturase) homolog (S. cerevisae)	protein-coding
common_peak1-10563-7-0-2.79909083029819-2.40823996531185	chr14	20924807	20925318	+	0	NA	Intergenic	B4|SINE|B4	-22668	NM_026209	67509	Mm.292423	NM_026209	ENSMUSG00000045107	Saysd1	1810063B07Rik|4930488P03Rik	SAYSVFN motif domain containing 1	protein-coding
common_peak2-21386-21-19-0.247561170378873-0.427564438475253	chr11	79710848	79711878	+	0	NA	Intergenic	Intergenic	64526	NM_144826	216987	Mm.274961	NM_144826	ENSMUSG00000035575	Utp6	4732497O03Rik|HCA66	UTP6, small subunit (SSU) processome component, homolog (yeast)	protein-coding
unique_peak2-36657-5-9--1.02630843089322-1.21398586181642	chr3	20034909	20035294	+	0	NA	intron (NM_013755, intron 6 of 7)	intron (NM_013755, intron 6 of 7)	19914	NM_013755	27357	Mm.6375	NM_013755	ENSMUSG00000019528	Gyg	AU017667|Gyg1	glycogenin	protein-coding
common_peak2-21290-22-54--1.13407560843726-2.66762268841486	chr11	70668812	70669750	+	0	NA	intron (NM_001291143, intron 2 of 18)	intron (NM_001291143, intron 2 of 18)	11018	NM_001291142	54189	Mm.7087	NM_019400	ENSMUSG00000020817	Rabep1	Rab5ep|rabaptin-5|rabaptin-5alpha	rabaptin, RAB GTPase binding effector protein 1	protein-coding
common_peak1-15325-10-13--0.450939577048835-0.386243247519795	chr4	46304894	46305350	+	0	NA	Intergenic	Intergenic	-51944	NM_183298	110805	Mm.354634	NM_183298		Foxe1	Titf2	forkhead box E1	protein-coding
common_peak2-28347-6-6--0.241956811677302-0.947717972411649	chr4	135675532	135675886	+	0	NA	Intergenic	B3|SINE|B2	-24028	NM_008321	15903	Mm.110	NM_008321		Id3	Hlh462|Idb3|bHLHb25	inhibitor of DNA binding 3	protein-coding
unique_peak1-2526-14-3-1.89921616035764-2.80787975886178	chr16	20803109	20803775	+	0	NA	Intergenic	Intergenic	-68858	NM_009379	21832	Mm.3943	NM_009379	ENSMUSG00000022847	Thpo	Mgdf|Ml|Mpllg|Tpo	thrombopoietin	protein-coding
unique_peak2-39959-1-10--3.08648862885404-2.57096726280955	chrX	140983390	140983979	+	0	NA	intron (NM_009428, intron 1 of 10)	L1Md_F3|LINE|L1	7098	NR_033647	100039436	Mm.483818	NM_001111315		Mageb16-ps1	EG623523|Gm15072|Mageb16|OTTMUSG00000018935	melanoma antigen family B, 16, pseudogene 1	pseudo
unique_peak1-2684-10-6-0.549060422951165-1.21398586181642	chr16	64884240	64884806	+	0	NA	Intergenic	RLTR28|LTR|ERVL	32612	NM_178647	106143	Mm.10160	NM_178647	ENSMUSG00000054604	Cggbp1	AA960172|AL023996|AW045841	CGG triplet repeat binding protein 1	protein-coding
unique_peak1-5437-16-5-1.53330114154691-1.80287260729378	chr5	115531562	115532298	+	0	NA	intron (NM_029012, intron 3 of 10)	B3|SINE|B2	26041	NM_001271591	100502825	Mm.361657	NM_001271590		Gm13826	OTTMUSG00000014624	predicted gene 13826	protein-coding
common_peak2-30686-8-11--0.579740082773585-1.14218153353838	chr7	109703728	109704256	+	0	NA	TTS (NM_147101)	TTS (NM_147101)	1192	NM_147101	259105	Mm.424092	NM_147101	ENSMUSG00000073977	Olfr549	MOR31-3	olfactory receptor 549	protein-coding
common_peak2-25879-12-12--0.0516637330534535-0.309718203022949	chr19	44145946	44146574	+	0	NA	Intergenic	B1F2|SINE|Alu	-1985	NM_001164360	226144	Mm.279865	NM_145502	ENSMUSG00000025198	Erlin1	2810439N09Rik|C80197|Keo4|Spfh1	ER lipid raft associated 1	protein-coding
common_peak1-17216-24-15-0.793209902767717-1.16796998271032	chr6	125425522	125426791	+	0	NA	intron (NM_007657, intron 1 of 7)	intron (NM_007657, intron 1 of 7)	18617	NM_007657	12527	Mm.210676	NM_007657	ENSMUSG00000030342	Cd9	Tspan29	CD9 antigen	protein-coding
unique_peak1-5313-9-2-1.60465090568306-1.87199725847353	chr5	77360040	77360554	+	0	NA	intron (NM_172146, intron 1 of 10)	RLTR4_MM-int|LTR|ERV1	-20139	NM_025939	67054	Mm.182931	NM_025939	ENSMUSG00000029247	Paics	2610511I09Rik|ADE2H1|AIRC|PAIS	phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase	protein-coding
common_peak1-15353-11-11--0.0762689164695427-0.301029995663976	chr4	56864934	56865445	+	0	NA	intron (NM_018761, intron 1 of 18)	ORR1E|LTR|MaLR	12894	NM_018761	54366	Mm.218891	NM_018761	ENSMUSG00000038816	Ctnnal1	ACRP|AI616177|AW545119|C86009|Catnal1	catenin (cadherin associated protein), alpha-like 1	protein-coding
common_peak1-13444-34-29-0.475177931392747-0.820829064533854	chr19	55867465	55868661	+	0	NA	intron (NM_001142920, intron 4 of 11)	intron (NM_001142920, intron 4 of 11)	51763	NM_001142923	21416	Mm.139815	NM_009333	ENSMUSG00000024985	Tcf7l2	TCF4B|TCF4E|Tcf-4|Tcf4|mTcf-4B|mTcf-4E	transcription factor 7 like 2, T cell specific, HMG box	protein-coding
common_peak2-28728-11-8-0.338768582809301-1.14218153353838	chr5	36179788	36180189	+	0	NA	intron (NM_001177700, intron 10 of 16)	intron (NM_001177700, intron 10 of 16)	-55980	NM_027373	70292	Mm.125167	NM_027373	ENSMUSG00000029094	Afap1	2600003E23Rik|9630044L16Rik|AI848729|Afap|mKIAA3018	actin filament associated protein 1	protein-coding
common_peak2-31487-4-11--1.6084230145744-1.68134727924692	chr8	106604203	106604707	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-21070	NM_009868	12562	Mm.21767	NM_009868	ENSMUSG00000031871	Cdh5	7B4|AA408225|Cd144|VE-Cad|VECD|VEcad|Vec	cadherin 5	protein-coding
common_peak2-20428-5-15--1.70438033600585-1.4372489031793	chr10	30600253	30600686	+	0	NA	Intergenic	L1Md_F|LINE|L1	-37880	NM_013904	15214	Mm.103573	NM_013904	ENSMUSG00000019789	Hey2	CHF1|Herp1|Hrt2|bHLHb32|hesr2	hairy/enhancer-of-split related with YRPW motif 2	protein-coding
unique_peak1-5112-11-2-1.92373108353046-2.32232533660526	chr4	156064157	156064689	+	0	NA	Intergenic	Intergenic	-455457	NM_198305	231003	Mm.423038	NM_198305	ENSMUSG00000078484	Klhl17	AL022703|BC058738	kelch-like 17	protein-coding
common_peak2-29874-25-27-0.0544949832875021-0.316543811862083	chr6	108570299	108571504	+	0	NA	intron (NR_104577, intron 1 of 6)	intron (NR_104577, intron 1 of 6)	2260	NR_040757	75394	Mm.395061	NR_040757	ENSMUSG00000087341	0610040F04Rik	-	RIKEN cDNA 0610040F04 gene	ncRNA
common_peak1-8229-12-10-0.189344366450341-0.386243247519795	chr10	12868384	12868880	+	0	NA	TTS (NM_029172)	TTS (NM_029172)	29197	NM_029172	75122	Mm.159433	NM_029172	ENSMUSG00000019815	Zc2hc1b	4930519B02Rik|Fam164b	zinc finger, C2HC-type containing 1B	protein-coding
unique_peak1-6751-10-1-2.35641534500877-2.57096726280955	chr8	49388576	49389124	+	0	NA	intron (NM_001145937, intron 12 of 26)	intron (NM_001145937, intron 12 of 26)	193483	NM_001161515	320685	Mm.121549	NM_178788	ENSMUSG00000031562	Dctd	6030466N05Rik	dCMP deaminase	protein-coding
unique_peak1-6212-8-4-0.683294323060208-1.21878474469819	chr7	80838388	80838907	+	0	NA	Intergenic	Intergenic	-7198	NR_033604	244061	Mm.484605	NR_033604		Gm4971	EG244061	Smad nuclear interacting protein 1 pseudogene	pseudo
common_peak1-15416-13-14--0.12841856497075-0.301029995663977	chr4	88781941	88782554	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-1027	NM_024433	66902	Mm.28500	NM_024433	ENSMUSG00000062937	Mtap	1300019I21Rik|MSAP	methylthioadenosine phosphorylase	protein-coding
unique_peak1-5244-10-2-1.77145284428761-2.09384600808989	chr5	51765637	51766154	+	0	NA	Intergenic	L1_Mm|LINE|L1	179265	NR_027710	19017	Mm.259072	NM_008904	ENSMUSG00000029167	Ppargc1a	A830037N07Rik|ENSMUSG00000079510|Gm11133|PGC-1|PGC-1v|Pgc-1alpha|Pgc1|Pgco1|Ppargc1	peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	protein-coding
common_peak2-22771-61-95--0.202213170971816-0.476832982524194	chr14	25377722	25379675	+	0	NA	Intergenic	BC1_Mm|scRNA|scRNA	68795	NM_011297	20088	Mm.16775	NM_011297	ENSMUSG00000025290	Rps24	-	ribosomal protein S24	protein-coding
common_peak2-22653-37-48--0.0887167726293896-0.31027100108714	chr13	94358298	94359575	+	0	NA	Intergenic	B1_Mur4|SINE|Alu	48777	NM_016668	12116	Mm.329582	NM_016668	ENSMUSG00000074768	Bhmt	-	betaine-homocysteine methyltransferase	protein-coding
unique_peak2-38806-6-10--0.894033508256995-1.21398586181642	chr7	133114758	133115200	+	0	NA	intron (NM_001101488, intron 2 of 6)	intron (NM_001101488, intron 2 of 6)	110946	NM_001101488	269994	Mm.39599	NM_001101488	ENSMUSG00000046182	Gsg1l	AI852434|C230098I05Rik|G630023A01Rik|Gm637|g1l	GSG1-like	protein-coding
common_peak2-22645-19-15-0.402687326661686-0.519193887192487	chr13	92844684	92845234	+	0	NA	intron (NM_009027, intron 1 of 23)	intron (NM_009027, intron 1 of 23)	56490	NM_009027	19418	Mm.248630	NM_009027		Rasgrf2	6330417G04Rik|AW048350|Grf2|Ras-GRF2	RAS protein-specific guanine nucleotide-releasing factor 2	protein-coding
unique_peak2-33697-0-6--3.64748585253182-1.56314192529759	chr11	106193103	106193547	+	0	NA	intron (NM_133199, intron 13 of 23)	intron (NM_133199, intron 13 of 23)	17379	NM_133199	110880	Mm.432528	NM_133199	ENSMUSG00000001027	Scn4a	Nav1.4|SkM1|mH2	sodium channel, voltage-gated, type IV, alpha	protein-coding
common_peak1-14969-18-41--1.07939827155041-1.90347783429882	chr3	105800899	105801668	+	0	NA	exon (NM_029604, exon 5 of 6)	exon (NM_029604, exon 5 of 6)	3132	NM_029604	100503311	Mm.386825	NM_029604	ENSMUSG00000010136	Pifo	1700027A23Rik	primary cilia formation	protein-coding
common_peak1-7604-25-21-0.402418286707809-0.580176690544129	chr1	58586300	58587064	+	0	NA	exon (NM_172513, exon 12 of 12)	exon (NM_172513, exon 12 of 12)	-24729	NM_008765	18393	Mm.3411	NM_008765	ENSMUSG00000026037	Orc2	AU041563|Orc2l	origin recognition complex, subunit 2	protein-coding
unique_peak2-36444-7-11--0.785871670422967-1.21681515183528	chr2	133552168	133552931	+	0	NA	Intergenic	Intergenic	174654	NM_007553	12156	Mm.103205	NM_007553	ENSMUSG00000027358	Bmp2	AI467020|Bmp2a	bone morphogenetic protein 2	protein-coding
common_peak1-7865-21-11-0.984526764545079-1.3750876294627	chr1	133212232	133213239	+	0	NA	intron (NM_001081011, intron 17 of 22)	intron (NM_001081011, intron 17 of 22)	-36595	NM_019777	56489	Mm.386783	NM_019777	ENSMUSG00000042349	Ikbke	AW558201|IKK-i|IKKepsilon|Ikki	inhibitor of kappaB kinase epsilon	protein-coding
common_peak1-14188-27-13-1.18419102883763-2.09887956687855	chr2	145218554	145219740	+	0	NA	intron (NM_053195, intron 2 of 16)	intron (NM_053195, intron 2 of 16)	-9891	NR_105748	102466620		NR_105748	miRBase:MI0021587	Mir6240	mmu-mir-6240	microRNA mir-6240	ncRNA
common_peak2-25108-20-38--0.797327434271056-1.23883036201157	chr18	36744028	36745266	+	0	NA	intron (NM_175375, intron 5 of 33)	ID|SINE|ID	24390	NM_175375	108857	Mm.482287	NM_175375	ENSMUSG00000024483	Ankhd1	1110004O12Rik|4933432B13Rik|9130019P20Rik|A530027J04Rik|A630021B20Rik|AA571404|Mask|mFLJ00246|mKIAA1085	ankyrin repeat and KH domain containing 1	protein-coding
common_peak2-24144-19-22--0.120874629395327-0.306080386793804	chr16	37653763	37654424	+	0	NA	intron (NM_026610, intron 1 of 2)	intron (NM_026610, intron 1 of 2)	361	NM_026610	68194	Mm.379154	NM_026610		Ndufb4	0610006N12Rik|1300010H20Rik	NADH dehydrogenase (ubiquinone) 1 beta subcomplex 4	protein-coding
common_peak1-11397-18-27--0.494435770829252-0.528262014464654	chr15	98144872	98145853	+	0	NA	Intergenic	Intergenic	-1383	NM_001011778	257943	Mm.309892	NM_001011778	ENSMUSG00000062037	Olfr285	MOR160-3	olfactory receptor 285	protein-coding
common_peak2-26031-11-7-0.508693584251613-1.21681515183528	chr19	60888885	60889302	+	0	NA	intron (NM_026437, intron 1 of 8)	B1_Mus1|SINE|Alu	1620	NM_001167829	67894	Mm.26148	NM_026437	ENSMUSG00000024993	Fam45a	1810055E12Rik	family with sequence similarity 45, member A	protein-coding
common_peak2-19953-15-11-0.4272022498345-0.503257505534083	chr1	132132958	132133628	+	0	NA	Intergenic	Intergenic	186283	NM_007827	13137	Mm.436759	NM_007827	ENSMUSG00000026401	Daf2	AI323748|Cd55b|Daf|Daf-TM|TM-DAF	decay accelerating factor 2	protein-coding
common_peak2-25238-27-12-1.29110623275414-2.3494062982954	chr18	64342269	64342846	+	0	NA	intron (NR_045366, intron 2 of 5)	intron (NR_045366, intron 2 of 5)	-71456	NM_009182	20451	Mm.252110	NM_009182	ENSMUSG00000056812	St8sia3	AI847333|ST8SiaIII|Siat8c	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	protein-coding
common_peak2-23247-8-12--0.695217300193522-0.475924844171029	chr15	10818053	10818574	+	0	NA	Intergenic	Intergenic	59507	NR_040357	100502601	Mm.399434	NR_040357		Gm19276	-	predicted gene, 19276	ncRNA
unique_peak2-37891-6-12--1.13504160776079-1.45089835786865	chr5	140316219	140316951	+	0	NA	Intergenic	Intergenic	-13788	NM_025604	66506	Mm.29070	NM_025604	ENSMUSG00000029551	Psmg3	1810042K04Rik|4930403H09Rik|AI303239	proteasome (prosome, macropain) assembly chaperone 3	protein-coding
common_peak1-13523-14-10-0.439784541720347-0.519648556297791	chr2	144555481	144556164	+	0	NA	intron (NM_025314, intron 4 of 5)	L1MB8|LINE|L1	-93580	NM_025490	66328	Mm.45377	NM_025490	ENSMUSG00000027431	Scp2d1	1700010M22Rik	SCP2 sterol-binding domain containing 1	protein-coding
unique_peak1-1835-11-1-2.50869358425161-2.83420869758413	chr14	41004106	41004781	+	0	NA	Intergenic	Intergenic	535492	NR_045936	73591	Mm.65499	NR_045936		1700109I08Rik	-	RIKEN cDNA 1700109I08 gene	ncRNA
unique_peak1-5895-7-0-2.79909083029819-2.40823996531185	chr6	87217081	87217604	+	0	NA	intron (NM_054041, intron 9 of 17)	RLTR8|LTR|ERVK	68427	NM_054041	69538	Mm.232525	NM_054041	ENSMUSG00000033420	Antxr1	2310008J16Rik|2810405N18Rik|Antrx1|Tem8	anthrax toxin receptor 1	protein-coding
common_peak1-17146-47-95--0.650121075954608-1.92313441404633	chr6	117716362	117717140	+	0	NA	Intergenic	Intergenic	-14964	NR_045731	72263	Mm.443289	NR_045731		1700030F04Rik	-	RIKEN cDNA 1700030F04 gene	ncRNA
unique_peak2-35616-2-11--2.50241675698448-2.32232533660526	chr17	84182971	84183613	+	0	NA	intron (NM_001171053, intron 10 of 13)	B1_Mur3|SINE|Alu	62838	NM_025325	107766	Mm.30100	NM_025325	ENSMUSG00000000673	Haao	0610007K21Rik|0610012J07Rik|3-HAO|3-HAOxase|3HAO	3-hydroxyanthranilate 3,4-dioxygenase	protein-coding
common_peak2-24769-28-28-0.194978124693891-0.390124689062469	chr17	56507025	56507895	+	0	NA	intron (NM_172132, intron 5 of 22)	intron (NM_172132, intron 5 of 22)	41987	NM_172132	193796	Mm.45047	NM_172132	ENSMUSG00000024201	Kdm4b	4732474L06Rik|Jmjd2b|mKIAA0876	lysine (K)-specific demethylase 4B	protein-coding
unique_peak1-6923-11-4-1.18676548936425-1.68134727924692	chr8	106588849	106589453	+	0	NA	Intergenic	Intergenic	-36374	NM_009868	12562	Mm.21767	NM_009868	ENSMUSG00000031871	Cdh5	7B4|AA408225|Cd144|VE-Cad|VECD|VEcad|Vec	cadherin 5	protein-coding
common_peak1-16667-37-46--0.0285957801918189-0.301029995663982	chr6	145211142	145212120	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	12559	NR_045598	100039495	Mm.121014	NR_045598	ENSMUSG00000086013	Gm15706	OTTMUSG00000025463	predicted gene 15706	ncRNA
common_peak1-16924-24-15-0.793209902767717-1.16796998271032	chr6	82761166	82762244	+	0	NA	Intergenic	Intergenic	-37257	NM_013820	15277	Mm.255848	NM_013820	ENSMUSG00000000628	Hk2	AI642394|HKII	hexokinase 2	protein-coding
common_peak2-30522-22-16-0.559821263837065-0.733541631673787	chr7	66339006	66339684	+	0	NA	Intergenic	Intergenic	-144775	NM_173010	22215	Mm.9002	NM_011668	ENSMUSG00000025326	Ube3a	4732496B02|5830462N02Rik|A130086L21Rik|Hpve6a|mKIAA4216	ubiquitin protein ligase E3A	protein-coding
common_peak2-28400-27-34--0.137737066049731-0.314192449397093	chr4	140630882	140631799	+	0	NA	intron (NM_025383, intron 1 of 7)	intron (NM_025383, intron 1 of 7)	2920	NM_025383	66147	Mm.21187	NM_025383	ENSMUSG00000028923	Necap2	1110005F07Rik|AA409105|C78898	NECAP endocytosis associated 2	protein-coding
common_peak1-7640-23-15-0.721767504509081-0.949797625454541	chr1	69685166	69686250	+	0	NA	intron (NM_011770, intron 3 of 7)	MTD|LTR|MaLR	46826	NM_011770	22779	Mm.106343	NM_011770	ENSMUSG00000025997	Ikzf2	A730095J18Rik|Helios|Zfpn1a2|Znfn1a2	IKAROS family zinc finger 2	protein-coding
common_peak2-20978-25-21-0.402418286707809-0.580176690544129	chr11	20895949	20897045	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-94830	NM_023324	67245	Mm.28957	NM_023324	ENSMUSG00000020134	Peli1	2810468L03Rik|A930031K15Rik|AA409794|AI586297|D11Ertd676e	pellino 1	protein-coding
unique_peak1-7155-17-1-3.21829633820504-4.59734841376773	chr9	57972001	57972864	+	0	NA	Intergenic	Intergenic	-4463	NM_001162475	20897	Mm.10801	NM_009291	ENSMUSG00000032327	Stra6	AI891933	stimulated by retinoic acid gene 6	protein-coding
common_peak1-10530-73-103--0.00804471171587018-0.301029995663957	chr14	13960354	13961830	+	0	NA	Intergenic	Intergenic	156060	NR_121589	328354	Mm.252404	NM_177813	ENSMUSG00000051729	Gm5087	C630025C03|EG328354	predicted gene 5087	ncRNA
common_peak1-14453-17-41--1.17402108457372-2.09421125609714	chr3	7503429	7504216	+	0	NA	intron (NM_173181, intron 1 of 8)	intron (NM_173181, intron 1 of 8)	396	NM_173181	67306	Mm.332366	NM_173181	ENSMUSG00000043542	Zc2hc1a	3110050N22Rik|AI790358|AU023959|Fam164a	zinc finger, C2HC-type containing 1A	protein-coding
unique_peak2-33472-2-8--2.08737925770563-1.65811743852845	chr11	69323516	69323927	+	0	NA	intron (NM_001081330, intron 12 of 85)	intron (NM_001081330, intron 12 of 85)	38889	NM_001081330	327954	Mm.247478	NM_177617	ENSMUSG00000005237	Dnah2	2900022L05Rik|4930564A01|D130094J20|D330014H01Rik|Dnahc2|Dnhd3	dynein, axonemal, heavy chain 2	protein-coding
common_peak1-8553-21-28--0.288491729861336-0.367910579842127	chr10	93425199	93425817	+	0	NA	Intergenic	Intergenic	1100	NR_029764	723908		NR_029764	miRBase:MI0000609	Mir331	Mirn331|mmu-mir-331	microRNA 331	ncRNA
common_peak2-26902-12-10-0.189344366450341-0.386243247519795	chr2	158512483	158513105	+	0	NA	intron (NM_001159662, intron 1 of 10)	intron (NM_001159662, intron 1 of 10)	19923	NM_001159662	228852	Mm.150540	NM_153089	ENSMUSG00000037754	Ppp1r16b	ANKRD4|C130078N17Rik|TIMAP|Wdt4	protein phosphatase 1, regulatory (inhibitor) subunit 16B	protein-coding
common_peak2-26887-13-5-1.19350952991661-1.95509489018123	chr2	157422134	157422572	+	0	NA	Intergenic	Lx9|LINE|L1	-30256	NM_016916	53619	Mm.480461	NM_016916	ENSMUSG00000067787	Blcap	AI462828|Bc10	bladder cancer associated protein homolog (human)	protein-coding
common_peak2-21503-12-28--1.20920501003993-1.52081014994907	chr11	93954913	93956013	+	0	NA	intron (NM_001025430, intron 15 of 25)	intron (NM_001025430, intron 15 of 25)	49944	NM_001025429	70834	Mm.260737	NM_027569	ENSMUSG00000020859	Spag9	3110018C07Rik|4733401I23Rik|4831406C20Rik|AW552012|JLP|JSAP2|JSAP2a|Jip4|Mapk8ip4|syd1	sperm associated antigen 9	protein-coding
common_peak2-23075-10-13--0.450939577048835-0.386243247519795	chr14	73552754	73553280	+	0	NA	intron (NM_134083, intron 2 of 14)	intron (NM_134083, intron 2 of 14)	10425	NR_033185	105670	Mm.280068	NM_134083	ENSMUSG00000022106	Rcbtb2	2610028E02Rik|2810420M18Rik|AI448345|AW240694|Chc1l|RC/BTB2	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2	protein-coding
unique_peak2-33876-0-7--3.84013093047421-1.80617997398389	chr12	27342255	27342659	+	0	NA	Intergenic	Intergenic	188377	NM_020557	22169	Mm.271839	NM_020557	ENSMUSG00000020638	Cmpk2	1200004E04Rik|TDKI|Tyki	cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial	protein-coding
common_peak2-31659-25-47--0.72311259537605-1.23561791483487	chr8	126594659	126595608	+	0	NA	Intergenic	Intergenic	47760	NM_001029876	382038	Mm.334891	NM_001029876	ENSMUSG00000031976	Urb2	C77575|mKIAA0133	URB2 ribosome biogenesis 2 homolog (S. cerevisiae)	protein-coding
common_peak2-25103-10-5-0.771452844287613-1.33892459842472	chr18	36686689	36687018	+	0	NA	promoter-TSS (NM_001271546)	promoter-TSS (NM_001271546)	-953	NM_172830	240215	Mm.135463	NM_172830	ENSMUSG00000024485	Slc4a9	AE4|D630003B07|D630024F24Rik	solute carrier family 4, sodium bicarbonate cotransporter, member 9	protein-coding
common_peak2-30599-31-46--0.329350180864514-0.513362016391488	chr7	81762877	81763738	+	0	NA	Intergenic	Intergenic	-63641	NM_001038643	108116	Mm.425467	NM_023908	ENSMUSG00000025790	Slco3a1	5830414C08Rik|Anr1|MJAM|OATP-D|R75096|Slc21a11	solute carrier organic anion transporter family, member 3a1	protein-coding
unique_peak2-36362-10-17--0.813509656433543-0.699649909729472	chr2	103760567	103761514	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-37112	NM_001142337	16909	Mm.29266	NM_008505	ENSMUSG00000032698	Lmo2	Rbtn-2|Rbtn2|Rhom-2|Ttg2	LIM domain only 2	protein-coding
common_peak2-30707-66-69-0.389200647480875-1.01696063309885	chr7	112427715	112428601	+	0	NA	Intergenic	Intergenic	-8451	NM_001011533	259161	Mm.377867	NM_001011533	ENSMUSG00000073909	Olfr688	MOR40-16|MOR40-5|Olfr688-ps1	olfactory receptor 688	protein-coding
common_peak1-16902-37-35-0.356068070043507-0.626414924887867	chr6	72369670	72370728	+	0	NA	intron (NM_019802, intron 4 of 14)	intron (NM_019802, intron 4 of 14)	5897	NM_019802	56316	Mm.19937	NM_019802	ENSMUSG00000053460	Ggcx	-	gamma-glutamyl carboxylase	protein-coding
unique_peak2-36759-1-7--2.62705701021674-1.80617997398389	chr3	63822342	63822710	+	0	NA	3' UTR (NM_001033300, exon 16 of 16)	3' UTR (NM_001033300, exon 16 of 16)	42461	NM_001033300	229363	Mm.331051	NM_001033300		Gmps	AA591640|AI047208	guanine monophosphate synthetase	protein-coding
common_peak2-24211-36-22-0.955759130110741-2.05089002217436	chr16	77329005	77329867	+	0	NA	promoter-TSS (NR_015543)	promoter-TSS (NR_015543)	-137	NR_015543	77994	Mm.394688	NR_015543	ENSMUSG00000090386	2810055G20Rik	D730043B02Rik	RIKEN cDNA 2810055G20 gene	ncRNA
unique_peak2-34181-10-6-0.549060422951165-1.21398586181642	chr13	34697356	34697583	+	0	NA	Intergenic	Intergenic	47081	NM_025831	66895	Mm.28943	NM_025831	ENSMUSG00000021411	Pxdc1	1300014I06Rik	PX domain containing 1	protein-coding
common_peak2-23660-9-8-0.0196884049619079-1.03275496310833	chr15	85347351	85347859	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-13948	NM_001256072	328577	Mm.212960	NM_001256072	ENSMUSG00000096607	7530416G11Rik	-	RIKEN cDNA 7530416G11 gene	protein-coding
common_peak1-8792-34-27-0.574713604943662-1.01480426461253	chr11	17211364	17212357	+	0	NA	Intergenic	Intergenic	54239	NM_020558	57316	Mm.287982	NM_020558	ENSMUSG00000000581	C1d	1110036E10Rik|AI875855|SUN-CoR	C1D nuclear receptor co-repressor	protein-coding
common_peak2-26257-52-94--0.461595618065249-1.13694527029009	chr2	30236665	30238336	+	0	NA	exon (NM_175392, exon 13 of 16)	exon (NM_175392, exon 13 of 16)	-10274	NM_020329	57170	Mm.285167	NM_020329	ENSMUSG00000026856	Dolpp1	0610011H20Rik|AB030189|LSFR2	dolichyl pyrophosphate phosphatase 1	protein-coding
common_peak2-26136-31-32-0.18084455145467-0.379775532323848	chr2	13371123	13372221	+	0	NA	intron (NM_001081084, intron 17 of 66)	intron (NM_001081084, intron 17 of 66)	41831	NM_001081084	65969	Mm.313915	NM_001081084	ENSMUSG00000026726	Cubn	AA408369|AL022750|D2Wsu88e	cubilin (intrinsic factor-cobalamin receptor)	protein-coding
common_peak2-31201-19-18-0.154759813218101-0.351190433797598	chr8	61247460	61248382	+	0	NA	intron (NM_175032, intron 1 of 11)	intron (NM_175032, intron 1 of 11)	-68328	NM_001177534	100271928	Mm.484123	NM_001177534		Gm15881	OTTMUSG00000027193	predicted gene 15881	protein-coding
common_peak2-25271-15-17--0.157760250886656-0.307611222530528	chr18	67933978	67934670	+	0	NA	promoter-TSS (NM_028112)	promoter-TSS (NM_028112)	-206	NM_028112	72124	Mm.307315	NM_028112	ENSMUSG00000079614	Seh1l	2610007A16Rik|AW540070|SEC13L|SEH1A|SEH1B|Seh1	SEH1-like (S. cerevisiae	protein-coding
common_peak2-20006-26-18-0.679971578714877-0.959433126956265	chr1	134803668	134804529	+	0	NA	intron (NM_010732, intron 1 of 1)	intron (NM_010732, intron 1 of 1)	27166	NM_010732	16980	Mm.39640	NM_010732	ENSMUSG00000026443	Lrrn2	5730406J09Rik|NLRR-2	leucine rich repeat protein 2, neuronal	protein-coding
common_peak1-7784-8-7-0.00522241794757061-1.00793137938329	chr1	97580392	97580713	+	0	NA	Intergenic	Lx7|LINE|L1	-16381	NM_001159745	20452	Mm.306228	NM_009183	ENSMUSG00000040710	St8sia4	PST|PST-1|SIAT8-D|ST8SiaIV|Siat8d	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	protein-coding
unique_peak1-7333-60-26-1.59940435945706-6.92454687748941	chr9	123461687	123462203	+	0	NA	intron (NM_030692, intron 5 of 19)	intron (NM_030692, intron 5 of 19)	22945	NM_030692	83493	Mm.273671	NM_030692	ENSMUSG00000025240	Sacm1l	SAC1|Sac1p|mKIAA0851	SAC1 (suppressor of actin mutations 1, homolog)-like (S. cerevisiae)	protein-coding
unique_peak2-39272-6-10--0.894033508256995-1.21398586181642	chr8	121283393	121284029	+	0	NA	intron (NM_019707, intron 4 of 13)	L1Md_T|LINE|L1	476056	NM_019707	12554	Mm.334841	NM_019707	ENSMUSG00000031841	Cdh13	4932416G01Rik|Cdht|T-cadherin|Tcad	cadherin 13	protein-coding
unique_peak1-2278-9-0-3.18961340640422-3.01029995663981	chr15	78996656	78997200	+	0	NA	intron (NR_029470, intron 1 of 4)	intron (NR_029470, intron 1 of 4)	432	NR_029470	100041655	Mm.483310	NR_029470	ENSMUSG00000075555	Gm10863	ENSMUSG00000075555	predicted gene 10863	ncRNA
unique_peak2-39655-5-10--1.16381195464315-1.33892459842472	chr9	106476269	106476731	+	0	NA	Intergenic	Intergenic	-3202	NM_026090	67320	Mm.335431	NM_026090	ENSMUSG00000041009	Iqcf4	1700042N06Rik|mtIQ1	IQ motif containing F4	protein-coding
unique_peak1-4376-13-2-2.19350952991661-3.03832868024006	chr2	158306275	158307043	+	0	NA	intron (NM_001291138, intron 25 of 29)	intron (NM_001291138, intron 25 of 29)	-21689	NM_145635	246747	Mm.28800	NM_145635	ENSMUSG00000044405	Adig	SMAF-1|Smaf1	adipogenin	protein-coding
common_peak2-31780-62-136--0.687280624158442-2.8798667770588	chr9	25150769	25152367	+	0	NA	Intergenic	L1Md_F2|LINE|L1	91528	NM_001205367	235072	Mm.270259	NM_009859	ENSMUSG00000001833	Sept7	Cdc10|E430034N22	septin 7	protein-coding
unique_peak2-35685-2-12--2.61789397440441-2.55640854263862	chr18	20058818	20059343	+	0	NA	Intergenic	L1Md_F2|LINE|L1	101518	NM_007882	13507	Mm.89935	NM_007882	ENSMUSG00000059898	Dsc3	5430426I24Rik	desmocollin 3	protein-coding
common_peak2-23217-7-8--0.370834171144123-1.00793137938329	chr15	3582745	3583216	+	0	NA	Intergenic	(TA)n|Simple_repeat|Simple_repeat	-49628	NM_010284	14600	Mm.3986	NM_010284	ENSMUSG00000055737	Ghr	GHBP|GHR/BP	growth hormone receptor	protein-coding
unique_peak1-3472-11-2-1.92373108353046-2.32232533660526	chr19	10112814	10113510	+	0	NA	Intergenic	Intergenic	-2876	NM_021890	60527	Mm.253875	NM_021890	ENSMUSG00000024664	Fads3	AI464531	fatty acid desaturase 3	protein-coding
common_peak1-16075-51-81--0.282628179015511-0.589033785605532	chr5	53590063	53591706	+	0	NA	intron (NM_172710, intron 2 of 23)	RSINE1|SINE|B4	13807	NM_172710	231238	Mm.235020	NM_172710	ENSMUSG00000029189	Sel1l3	2310045A20Rik|AI429585|mKIAA0746	sel-1 suppressor of lin-12-like 3 (C. elegans)	protein-coding
common_peak2-22438-19-33--0.684775514588653-0.884951936461256	chr13	38960007	38961045	+	0	NA	Intergenic	Lx8|LINE|L1	91880	NM_001170430	108652	Mm.255506	NM_134060	ENSMUSG00000021432	Slc35b3	4921526O06Rik|AI428480|CGI-19|PABST2|PAPST2	solute carrier family 35, member B3	protein-coding
common_peak1-19065-15-48--1.60254509355955-3.936930499713	chr9	69453543	69454191	+	0	NA	Intergenic	L1Md_F2|LINE|L1	149116	NR_037296	100526560		NR_037296	miRBase:MI0014106	Mir3109	mmu-mir-3109	microRNA 3109	ncRNA
common_peak1-12759-28-22-0.529397163764449-0.781990829058356	chr18	60613571	60615001	+	0	NA	Intergenic	L1_Mur3|LINE|L1	47351	NM_134133	106878	Mm.273197	NM_134133	ENSMUSG00000038059	Smim3	2010002N04Rik|AI195350|AW561905|Nid67|cI-41	small integral membrane protein 3	protein-coding
common_peak2-23128-44-36-0.612439468939585-1.33966217785261	chr14	101653640	101654367	+	0	NA	Intergenic	Intergenic	-54717	NM_029680	76627	Mm.31415	NM_029680	ENSMUSG00000042888	Prr30	1700110M21Rik	proline rich 30	protein-coding
unique_peak2-36066-5-4--0.0263084308932156-0.909929411522249	chr19	53420192	53420621	+	0	NA	intron (NM_010847, intron 2 of 5)	ID_B1|SINE|B4	15470	NM_001008543	17859	Mm.2154	NM_010847	ENSMUSG00000025025	Mxi1	ENSMUSG00000067085|Gm10197|Mad2|bHLHc11	Max interacting protein 1	protein-coding
unique_peak2-35424-8-9--0.316705676939792-1.03275496310833	chr17	34604255	34604784	+	0	NA	Intergenic	Intergenic	8363	NM_030746	632126	Mm.484958	NM_030746	ENSMUSG00000058435	Btnl4	Btn3a3|EG632126|NG11	butyrophilin-like 4	protein-coding
unique_peak2-35278-6-5--0.0195643903408542-0.947717972411649	chr17	5839770	5840205	+	0	NA	Intergenic	MTD|LTR|MaLR	-1393	NM_025664	66616	Mm.89515	NM_025664	ENSMUSG00000002365	Snx9	2700073N08Rik|SDP1|SH3PX1	sorting nexin 9	protein-coding
common_peak1-14582-17-19--0.103631756682325-0.301029995663974	chr3	41083269	41084057	+	0	NA	Intergenic	Intergenic	-196695	NM_027558	70804	Mm.40321	NM_027558	ENSMUSG00000049940	Pgrmc2	4631434O19Rik|5730409G06Rik|DG6|PMBP	progesterone receptor membrane component 2	protein-coding
common_peak2-23332-54-103--0.527353956511358-1.49979460444322	chr15	38077793	38078877	+	0	NA	Intergenic	Intergenic	-69726	NM_001081359	70790	Mm.476840	NM_027553	ENSMUSG00000037487	Ubr5	Edd|Edd1	ubiquitin protein ligase E3 component n-recognin 5	protein-coding
common_peak2-27723-20-28--0.369906210536379-0.457753417732779	chr3	122984592	122985186	+	0	NA	intron (NM_027135, intron 3 of 22)	intron (NM_027135, intron 3 of 22)	14475	NM_027135	69608	Mm.29293	NM_027135	ENSMUSG00000039234	Sec24d	2310020L09Rik|Gm1349	Sec24 related gene family, member D (S. cerevisiae)	protein-coding
common_peak2-27359-17-22--0.305265617851975-0.348739088570342	chr3	83055470	83056059	+	0	NA	Intergenic	Intergenic	196304	NM_016784	53317	Mm.286349	NM_016784	ENSMUSG00000027998	Plrg1	AA958940|C80566|Tango4	pleiotropic regulator 1, PRL1 homolog (Arabidopsis)	protein-coding
unique_peak1-1661-15-4-1.69023665566829-1.97518968347063	chr13	63241389	63242096	+	0	NA	intron (NM_001289926, intron 5 of 15)	intron (NM_001289926, intron 5 of 15)	-99596	NR_110520	72061	Mm.188105	NM_028079	ENSMUSG00000021458	2010111I01Rik	2300006M17Rik|AP-O|Aopep	RIKEN cDNA 2010111I01 gene	protein-coding
common_peak1-8821-9-4-0.867685311516858-1.36011389749466	chr11	22843070	22843840	+	0	NA	intron (NM_144514, intron 2 of 2)	(CCCA)n|Simple_repeat|Simple_repeat	-28550	NM_011663	22183	Mm.29542	NM_011663	ENSMUSG00000044068	Zrsr1	D11Ncvs75|Irlgs2|SP2|U2af1-rs1|U2afbp-rs	zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1	protein-coding
common_peak1-12971-29-14-1.20539948500659-2.32006591355686	chr19	3926248	3927482	+	0	NA	intron (NM_026316, intron 1 of 9)	intron (NM_026316, intron 1 of 9)	2851	NM_026316	67689	Mm.109341	NM_026316	ENSMUSG00000024885	Aldh3b1	1700001N19Rik|ALDH4|ALDH7	aldehyde dehydrogenase 3 family, member B1	protein-coding
common_peak1-13823-121-175-0.107934163240701-0.434925587542862	chr2	57122994	57124705	+	0	NA	intron (NM_010274, intron 2 of 16)	RMER6A|LTR|ERVK	33056	NM_010274	14571	Mm.3711	NM_010274	ENSMUSG00000026827	Gpd2	AA408484|AI448216|AU021455|AW494132|GPDH|Gdm1|Gpd-m|Gpdh-m|TISP38	glycerol phosphate dehydrogenase 2, mitochondrial	protein-coding
common_peak2-21302-10-10--0.103016273628528-0.301029995663987	chr11	72847972	72848452	+	0	NA	intron (NM_018883, intron 10 of 15)	intron (NM_018883, intron 10 of 15)	-13157	NM_025818	66874	Mm.41903	NM_025818		1200014J11Rik	C130061O14Rik|C78393	RIKEN cDNA 1200014J11 gene	protein-coding
unique_peak2-33215-7-9--0.522837264589173-1.05908390183068	chr10	116298066	116298615	+	0	NA	intron (NM_001033333, intron 2 of 24)	L1M4|LINE|L1	35595	NM_001033333	237558	Mm.336386	NM_001033333	ENSMUSG00000034057	Myrfl	Gm239	myelin regulatory factor-like	protein-coding
unique_peak2-39091-8-10--0.454209200689727-1.078512453669	chr8	76899240	76899705	+	0	NA	Intergenic	RMER1C|Other|Other	-497601	NM_027837	71597	Mm.158735	NM_027837	ENSMUSG00000031621	Isx	9130012O13Rik|Pix-1	intestine specific homeobox	protein-coding
unique_peak2-36246-6-8--0.60452689106201-1.03789460276074	chr2	43735444	43735871	+	0	NA	intron (NM_001025377, intron 5 of 5)	intron (NM_001025377, intron 5 of 5)	131310	NM_001025377	76117	Mm.217350	NM_153820	ENSMUSG00000049744	Arhgap15	5830480G12Rik	Rho GTPase activating protein 15	protein-coding
common_peak2-22514-18-27--0.494435770829252-0.528262014464654	chr13	54589972	54591146	+	0	NA	Intergenic	RMER10A|LTR|ERVL	-14607	NM_176987	319719	Mm.376151	NM_176987	ENSMUSG00000043183	Simc1	4732471D19Rik	SUMO-interacting motifs containing 1	protein-coding
unique_peak2-37741-9-24--1.4542427833705-1.83731222263754	chr5	110269157	110269834	+	0	NA	Intergenic	Lx6|LINE|L1	-6334	NR_027964	667213	Mm.454429	NR_027964		Gm10416	EG667213|ENSMUSG00000072761	zinc finger protein pseudogene	pseudo
common_peak1-13094-17-11-0.633333837483882-0.769930178837768	chr19	7303222	7303968	+	0	NA	intron (NM_027643, intron 6 of 7)	B3A|SINE|B2	-11489	NM_007750	12868	Mm.14022	NM_007750	ENSMUSG00000035885	Cox8a	COX8L	cytochrome c oxidase subunit VIIIa	protein-coding
common_peak1-11598-14-28--0.958764834769927-1.16796998271031	chr16	17451902	17452703	+	0	NA	5' UTR (NM_007764, exon 1 of 3)	5' UTR (NM_007764, exon 1 of 3)	224	NM_007764	12929	Mm.21048	NM_007764		Crkl	1110025F07Rik|AA589403|AI325100|Crkol	v-crk sarcoma virus CT10 oncogene homolog (avian)-like	protein-coding
unique_peak2-33916-3-9--1.73591118484664-1.57096726280955	chr12	69228243	69228591	+	0	NA	Intergenic	Lx3C|LINE|L1	-458159	NR_033146	100316870	Mm.379794	NR_033146		Gm17821	-	DDB1 and CUL4 associated factor 5 pseudogene	pseudo
unique_peak2-38278-1-46--5.18164586189438-12.3477007262448	chr6	132463632	132463882	+	0	NA	Intergenic	Lx8|LINE|L1	-56103	NM_011174	19131	Mm.425348	NM_011174	ENSMUSG00000059934	Prh1	MP2|Prp	proline rich protein HaeIII subfamily 1	protein-coding
common_peak2-22227-10-24--1.28744084476596-1.59083646988122	chr12	118836539	118837503	+	0	NA	intron (NM_175930, intron 8 of 27)	intron (NM_175930, intron 8 of 27)	82069	NM_175930	217944	Mm.227642	NM_175930	ENSMUSG00000041992	Rapgef5	4932413M22|C86120|D030051B22Rik|GFR|Mrgef|mKIAA0277|mmr-gef	Rap guanine nucleotide exchange factor (GEF) 5	protein-coding
common_peak2-26809-45-40-0.502806020726788-1.02303743263849	chr2	150769511	150771115	+	0	NA	intron (NM_207204, intron 19 of 23)	intron (NM_207204, intron 19 of 23)	34983	NM_001163476	69270	Mm.271603	NM_027014	ENSMUSG00000027454	Gins1	2810418N01Rik|Gins4|PSF1|mKIAA0186	GINS complex subunit 1 (Psf1 homolog)	protein-coding
common_peak2-22985-31-35-0.0553136693708112-0.313095283157747	chr14	56810793	56811689	+	0	NA	Intergenic	L1Md_T|LINE|L1	-17808	NM_153052	245839	Mm.207063	NM_153052	ENSMUSG00000015443	Gzmn	GrN	granzyme N	protein-coding
common_peak1-17080-52-114--0.737230060678676-2.72871009473243	chr6	108659597	108660606	+	0	NA	Intergenic	Intergenic	-49173	NR_104577	75394	Mm.395061	NR_040757	ENSMUSG00000087341	0610040F04Rik	-	RIKEN cDNA 0610040F04 gene	ncRNA
unique_peak1-4862-13-6-0.971117108580164-1.01572999746118	chr4	3677879	3678572	+	0	NA	intron (NM_001111096, intron 8 of 12)	intron (NM_001111096, intron 8 of 12)	36114	NR_028126	70720	Mm.445696	NR_028126		6330407A03Rik	-	RIKEN cDNA 6330407A03 gene	ncRNA
common_peak2-30298-12-14--0.25811461052088-0.309074325783021	chr7	19332489	19332945	+	0	NA	Intergenic	ETnERV2-int|LTR|ERVK	29278	NM_001004152	243862	Mm.389833	NM_001004152	ENSMUSG00000044903	Psg22	AA408604|cea9	pregnancy-specific glycoprotein 22	protein-coding
unique_peak1-7090-8-2-1.42025991722641-1.65811743852845	chr9	32901041	32901551	+	0	NA	Intergenic	Intergenic	397669	NM_001038642	23871	Mm.292415	NM_011808	ENSMUSG00000032035	Ets1	AI196000|AI448617|D230050P06|Ets-1|Tpl1	E26 avian leukemia oncogene 1, 5' domain	protein-coding
unique_peak2-36119-4-9--1.34538860874061-1.36011389749466	chr2	5137569	5138160	+	0	NA	intron (NM_028804, intron 2 of 2)	intron (NM_028804, intron 2 of 2)	79042	NM_028804	74186	Mm.274715	NM_028804	ENSMUSG00000026676	Ccdc3	2310045O21Rik	coiled-coil domain containing 3	protein-coding
common_peak2-30734-8-17--1.16470258349474-1.02063122982878	chr7	116442856	116443401	+	0	NA	intron (NM_054103, intron 13 of 13)	L1MA6|LINE|L1	-129306	NM_057173	109594	Mm.360145	NM_057173	ENSMUSG00000036111	Lmo1	Rbtn-1|Rbtn1|Ttg1	LIM domain only 1	protein-coding
common_peak1-8692-11-9-0.186765489364251-0.344532117358383	chr11	57687745	57688364	+	0	NA	Intergenic	Intergenic	-42405	NM_008213	15110	Mm.4746	NM_008213	ENSMUSG00000037335	Hand1	Ehand1|Hxt|Th1|Thing1|bHLHa27|eHAND	heart and neural crest derivatives expressed transcript 1	protein-coding
unique_peak1-158-9-1-2.18961340640422-2.31132995230379	chr1	73031209	73031691	+	0	NA	Intergenic	Intergenic	31023	NM_009407	21958	Mm.425024	NM_009407	ENSMUSG00000026182	Tnp1	Stp-1|TP1|Tp-1	transition protein 1	protein-coding
common_peak1-7574-12-7-0.648775985087639-0.697979855752659	chr1	51264615	51265168	+	0	NA	Intergenic	L1M2|LINE|L1	-81079	NM_138741	20324	Mm.398690	NM_138741	ENSMUSG00000045954	Sdpr	-	serum deprivation response	protein-coding
common_peak2-24725-13-9-0.456543935750406-0.53895475198017	chr17	47295030	47295490	+	0	NA	intron (NM_001097623, intron 3 of 19)	intron (NM_001097623, intron 3 of 19)	17369	NM_001097623	224829	Mm.260989	NM_172622	ENSMUSG00000064043	Trerf1	9430096I18Rik|AI429294|B830015H24|RAPA|Trep-132|Trep132	transcriptional regulating factor 1	protein-coding
common_peak1-18222-11-39--1.81323451063575-3.91086877283603	chr8	25601376	25601891	+	0	NA	Intergenic	Intergenic	-52215	NM_026931	69068	Mm.25775	NM_026931	ENSMUSG00000056313	1810011O10Rik	1110065B09Rik|AW121743|AW321058	RIKEN cDNA 1810011O10 gene	protein-coding
common_peak2-31691-13-16--0.30899081061257-0.330004445983672	chr8	129233632	129234259	+	0	NA	Intergenic	Intergenic	-116609	NM_001164598	270110	Mm.334918	NM_001164598	ENSMUSG00000051495	Irf2bp2	E130305N23Rik|IRF-2BP2	interferon regulatory factor 2 binding protein 2	protein-coding
unique_peak2-37965-0-5--3.42509343119537-1.32905871926422	chr6	83033761	83034119	+	0	NA	Intergenic	Intergenic	-2419	NM_010692	16815	Mm.20359	NM_010692	ENSMUSG00000034968	Lbx2	Lbx2h	ladybird homeobox homolog 2 (Drosophila)	protein-coding
unique_peak1-6197-10-5-0.771452844287613-1.33892459842472	chr6	148818530	148819128	+	0	NA	intron (NM_181541, intron 8 of 18)	intron (NM_181541, intron 8 of 18)	25930	NM_001301351	232560	Mm.150568	NM_181541	ENSMUSG00000030309	Caprin2	C1qdc1|Eeg1|rng140	caprin family member 2	protein-coding
common_peak2-25695-14-11-0.314253659636488-0.435191258261915	chr19	17256064	17256675	+	0	NA	intron (NM_181348, intron 11 of 19)	ORR1B2|LTR|MaLR	157626	NM_001136484	14537	Mm.244825	NM_010265	ENSMUSG00000038843	Gcnt1	5630400D21Rik|B130048E03|C2 GlcNAcT|C2GNT|IGnT	glucosaminyl (N-acetyl) transferase 1, core 2	protein-coding
common_peak1-12797-7-12--0.901348887842903-1.31827279259406	chr18	64986513	64986943	+	0	NA	Intergenic	Intergenic	-60682	NM_001114386	83814	Mm.98668	NM_031881	ENSMUSG00000024589	Nedd4l	1300012C07Rik|Nedd4-2|Nedd4b	neural precursor cell expressed, developmentally down-regulated gene 4-like	protein-coding
common_peak1-12227-12-17--0.521149016354673-0.417187467413082	chr17	34964392	34964948	+	0	NA	intron (NM_019442, intron 4 of 6)	MuRRS4-int|LTR|ERV1	-4271	NM_011413	625018	Mm.439678	NM_011413		C4a	Slp	complement component 4A (Rodgers blood group)	protein-coding
common_peak2-19699-32-77--1.00631019964259-3.05468825467783	chr1	60565917	60567646	+	0	NA	intron (NM_001045513, intron 4 of 13)	intron (NM_001045513, intron 4 of 13)	56828	NM_001045513	77300	Mm.440325	NM_001045513	ENSMUSG00000026014	Raph1	9430025M21Rik|C730009O10Rik|Lpd	Ras association (RalGDS/AF-6) and pleckstrin homology domains 1	protein-coding
unique_peak1-3350-12-0-3.64877598508764-4.21441993929574	chr19	21659339	21659937	+	0	NA	Intergenic	Intergenic	67643	NM_025423	66206	Mm.272430	NM_025423	ENSMUSG00000035171	1110059E24Rik	-	RIKEN cDNA 1110059E24 gene	protein-coding
unique_peak2-34972-7-8--0.370834171144123-1.00793137938329	chr15	98532798	98533181	+	0	NA	Intergenic	L1M5|LINE|L1	-5669	NM_153518	105833	Mm.26205	NM_153518	ENSMUSG00000003354	Ccdc65	4933417K04Rik|AI428139|AU020178|NYD-SP28	coiled-coil domain containing 65	protein-coding
unique_peak1-4609-9-0-3.18961340640422-3.01029995663981	chr3	65845593	65846121	+	0	NA	Intergenic	Intergenic	-83710	NM_019937	56706	Mm.175612	NM_019937	ENSMUSG00000027829	Ccnl1	2610030E23Rik|AU018493|Ccnl|ania-6a	cyclin L1	protein-coding
unique_peak2-32761-3-10--1.87341470859657-1.75805390616669	chr1	171072440	171072920	+	0	NA	Intergenic	Intergenic	388915	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
unique_peak2-37314-4-8--1.19338551529556-1.21878474469819	chr4	125085185	125085580	+	0	NA	Intergenic	Intergenic	-82693	NM_001081097	14807	Mm.40896	NM_001081097	ENSMUSG00000001985	Grik3	9630027E11|GluK3|GluR7-3|Glur-7|Glur7	glutamate receptor, ionotropic, kainate 3	protein-coding
common_peak2-23599-11-8-0.338768582809301-1.14218153353838	chr15	80710536	80711118	+	0	NA	exon (NM_144812, exon 8 of 25)	exon (NM_144812, exon 8 of 25)	-59642	NR_039573	100628612		NR_039573	miRBase:MI0018022	Mir5113	mmu-mir-5113|mu-mir-5113	microRNA 5113	ncRNA
common_peak2-31694-25-61--1.09234640504177-2.82656563060959	chr9	13827407	13828743	+	0	NA	Intergenic	Intergenic	195904	NM_176836	72826	Mm.246174	NM_176836	ENSMUSG00000037808	Fam76b	2810485I05Rik|C78303	family with sequence similarity 76, member B	protein-coding
common_peak2-21139-11-16--0.578769256998726-0.503257505534083	chr11	54936022	54936712	+	0	NA	Intergenic	(GA)n|Simple_repeat|Simple_repeat	24880	NM_010299	14667	Mm.287807	NM_010299	ENSMUSG00000000594	Gm2a	AA408702|AW215435|GM2-AP|SAP-3	GM2 ganglioside activator protein	protein-coding
unique_peak1-770-8-1-2.00522241794757-2.05605744720049	chr10	126961963	126962506	+	0	NA	TTS (NM_183297)	TTS (NM_183297)	-2734	NM_028230	108037	Mm.29890	NM_028230	ENSMUSG00000025403	Shmt2	2700043D08Rik|AA408223|AA986903	serine hydroxymethyltransferase 2 (mitochondrial)	protein-coding
unique_peak1-6086-7-0-2.79909083029819-2.40823996531185	chr6	122743480	122744043	+	0	NA	Intergenic	RMER4B|LTR|ERVK	-26441	NM_021899	60611	Mm.87142	NM_021899	ENSMUSG00000003154	Foxj2	Fhx	forkhead box J2	protein-coding
common_peak2-21009-9-12--0.510826311736872-0.394412252720706	chr11	28907504	28908055	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-122972	NM_027869	71701	Mm.211131	NM_027869	ENSMUSG00000020464	Pnpt1	1200003F12Rik|Old35|PNPase|Pnptl1	polyribonucleotide nucleotidyltransferase 1	protein-coding
common_peak2-20144-11-13--0.298661337805991-0.337263207250336	chr1	167308787	167309416	+	0	NA	intron (NM_028759, intron 10 of 18)	intron (NM_028759, intron 10 of 18)	81493	NM_028759	74106	Mm.227605	NM_028759	ENSMUSG00000026571	Dcaf6	1200006M05Rik|Iqwd1|PC326	DDB1 and CUL4 associated factor 6	protein-coding
unique_peak2-35097-15-22--0.511397205501357-0.50761186003982	chr16	20651694	20652258	+	0	NA	intron (NM_134101, intron 1 of 20)	CpG	251	NM_134101	21762	Mm.243234	NM_134101	ENSMUSG00000006998	Psmd2	9430095H01Rik|AA407121|TEG-190|Tex190	proteasome (prosome, macropain) 26S subunit, non-ATPase, 2	protein-coding
common_peak1-13721-7-10--0.660340788339108-1.12966497611638	chr2	30864697	30865225	+	0	NA	intron (NM_028846, intron 10 of 24)	intron (NM_028846, intron 10 of 24)	27162	NM_028846	74270	Mm.346654	NM_028846	ENSMUSG00000026854	Usp20	1700055M05Rik|AI467231|Vdu2	ubiquitin specific peptidase 20	protein-coding
common_peak2-29185-22-30--0.30691220529947-0.399869693390336	chr5	135186564	135188029	+	0	NA	intron (NM_007925, intron 26 of 36)	B3|SINE|B2	-22836	NM_010717	16885	Mm.15409	NM_010717	ENSMUSG00000029674	Limk1	-	LIM-domain containing, protein kinase	protein-coding
unique_peak1-7182-10-5-0.771452844287613-1.33892459842472	chr9	62813977	62814428	+	0	NA	intron (NM_019663, intron 1 of 13)	B1F|SINE|Alu	14484	NM_019663	56469	Mm.431253	NM_019663	ENSMUSG00000032405	Pias1	2900068C24Rik|Ddxbp1|GBP	protein inhibitor of activated STAT 1	protein-coding
common_peak1-9327-14-10-0.439784541720347-0.519648556297791	chr11	95105088	95105713	+	0	NA	Intergenic	Intergenic	-17443	NM_053093	93670	Mm.40085	NM_053093	ENSMUSG00000020872	Tac4	AW489379|PPT-C	tachykinin 4	protein-coding
common_peak1-18533-8-9--0.316705676939792-1.03275496310833	chr8	94377522	94378009	+	0	NA	Intergenic	Intergenic	-52212	NM_008393	16373	Mm.238044	NM_008393	ENSMUSG00000031734	Irx3	AI894186	Iroquois related homeobox 3	protein-coding
common_peak1-14375-12-21--0.810655633549659-0.713635438203849	chr2	167932496	167933072	+	0	NA	Intergenic	Intergenic	26280	NM_021409	58220	Mm.292834	NM_021409	ENSMUSG00000044641	Pard6b	AV025615|Par6b	par-6 family cell polarity regulator beta	protein-coding
common_peak2-24915-47-80--0.405008578118077-0.858683394889009	chr17	86166208	86168173	+	0	NA	Intergenic	B4A|SINE|B4	-79596	NM_011380	20472	Mm.5039	NM_011380	ENSMUSG00000024134	Six2	-	sine oculis-related homeobox 2	protein-coding
unique_peak2-38120-6-13--1.2419568116773-1.58711810488664	chr6	81965495	81966087	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-25831	NM_145570	232146	Mm.489683	NM_145570	ENSMUSG00000035104	Eva1a	BC014699|Fam176a|Tmem166	eva-1 homolog A (C. elegans)	protein-coding
unique_peak1-2108-16-8-0.948338640825749-1.02063122982878	chr15	40362053	40362846	+	0	NA	Intergenic	Intergenic	-3626	NR_046185	432945	Mm.321981	NR_046185	ENSMUSG00000056332	Gm16294	EG432945|OTTMUSG00000033304	predicted gene 16294	ncRNA
unique_peak2-38068-2-5--1.50241675698448-1.08602067057793	chr6	48298968	48299445	+	0	NA	Intergenic	Intergenic	-46379	NM_133922	77827	Mm.107646	NM_133922	ENSMUSG00000042810	Krba1	A930040G15Rik|AI448780	KRAB-A domain containing 1	protein-coding
common_peak2-27256-52-65-0.0638658709072457-0.326961876409496	chr3	55112046	55112916	+	0	NA	intron (NM_001111053, intron 3 of 6)	intron (NM_001111053, intron 3 of 6)	66033	NM_001195538	13175	Mm.393242	NM_019978	ENSMUSG00000027797	Dclk1	1700113D08Rik|2810480F11Rik|AI836758|Click-I|Cpg16|Dcamkl1|Dcl|Dclk|mKIAA0369	doublecortin-like kinase 1	protein-coding
unique_peak2-37508-11-11--0.0762689164695427-0.301029995663976	chr5	14038967	14039540	+	0	NA	intron (NM_011348, intron 1 of 16)	intron (NM_011348, intron 1 of 16)	13977	NM_011348	20349	Mm.134093	NM_011348	ENSMUSG00000063531	Sema3e	6430702L12|AA408817|Semah|mKIAA0331	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E	protein-coding
common_peak2-26074-36-29-0.572430490559236-1.05820747366651	chr2	94272764	94273942	+	0	NA	intron (NM_007466, intron 1 of 13)	RMER15|LTR|ERVL	4951	NM_007466	11800	Mm.181824	NM_007466	ENSMUSG00000027193	Api5	AAC-11|AI196452	apoptosis inhibitor 5	protein-coding
unique_peak2-34666-7-6--0.00826409175941478-0.97990265578305	chr15	99712657	99713167	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	-7025	NM_001113545	65970	Mm.33207	NM_023063	ENSMUSG00000023022	Lima1	Eplin	LIM domain and actin binding 1	protein-coding
unique_peak1-4897-8-4-0.683294323060208-1.21878474469819	chr4	45453165	45453679	+	0	NA	intron (NM_001033306, intron 5 of 5)	intron (NM_001033306, intron 5 of 5)	-31784	NM_001009949	230125	Mm.260210	NM_001009949	ENSMUSG00000045973	Slc25a51	9130208E07Rik|D130005A03Rik|Gm138|Mcart1	solute carrier family 25, member 51	protein-coding
unique_peak2-32439-7-12--0.901348887842903-1.31827279259406	chr1	53297099	53297659	+	0	NA	intron (NM_153556, intron 5 of 12)	L1_Mm|LINE|L1	-52918	NM_027070	69397	Mm.307084	NM_027070	ENSMUSG00000060715	1700019A02Rik	-	RIKEN cDNA 1700019A02 gene	protein-coding
common_peak2-25362-10-10--0.103016273628528-0.301029995663987	chr18	82470348	82470954	+	0	NA	Intergenic	Intergenic	105518	NM_008082	14427	Mm.6219	NM_008082	ENSMUSG00000024553	Galr1	Galnr1	galanin receptor 1	protein-coding
unique_peak1-4280-6-0-2.5653981103803-2.10720996964787	chr2	138191583	138192041	+	0	NA	Intergenic	MER63B|DNA|AcHobo	87583	NM_145534	228662	Mm.153405	NM_145534	ENSMUSG00000062098	Btbd3	mKIAA0952	BTB (POZ) domain containing 3	protein-coding
common_peak2-27604-11-12--0.191746133889479-0.310474156842889	chr3	103278577	103279250	+	0	NA	Intergenic	(TTTTG)n|Simple_repeat|Simple_repeat	-100292	NM_001276679	54524	Mm.88818	NM_018800	ENSMUSG00000027849	Syt6	3110037A08Rik|AW048930|sytVI	synaptotagmin VI	protein-coding
common_peak2-21636-31-45--0.29832328524389-0.470780655014941	chr11	101315616	101316991	+	0	NA	intron (NM_027320, intron 1 of 6)	intron (NM_027320, intron 1 of 6)	6577	NM_027320	70110	Mm.45558	NM_027320	ENSMUSG00000010358	Ifi35	2010008K16Rik|AW986054|IFP35|ifi-35	interferon-induced protein 35	protein-coding
unique_peak1-5072-12-4-1.32684789020028-2.04196296489515	chr4	140296779	140297531	+	0	NA	intron (NM_153106, intron 2 of 15)	B1_Mur4|SINE|Alu	1403	NM_153106	242726	Mm.271661	NM_153106	ENSMUSG00000040935	Padi6	Pad6|Padi5|ePAD	peptidyl arginine deiminase, type VI	protein-coding
unique_peak1-6259-14-3-1.89921616035764-2.80787975886178	chr7	19866336	19866887	+	0	NA	Intergenic	Intergenic	-1213	NM_177691	232941	Mm.134068	NM_177691	ENSMUSG00000030402	Ppm1n	A930002H20|C79127	protein phosphatase, Mg2+/Mn2+ dependent, 1N (putative)	protein-coding
common_peak1-17915-16-11-0.533301141546906-0.58239619684445	chr7	126376833	126377391	+	0	NA	Intergenic	B1_Mur2|SINE|Alu	-49224	NM_001024138	209776	Mm.300632	NM_001024138	ENSMUSG00000066197	Gpr139	GPRg1|Gm495|PGR3	G protein-coupled receptor 139	protein-coding
unique_peak2-33675-3-4--0.73591118484664-0.864171920961574	chr11	102217853	102218162	+	0	NA	intron (NM_011403, intron 11 of 19)	intron (NM_011403, intron 11 of 19)	8588	NM_011403	20533	Mm.7248	NM_011403	ENSMUSG00000006574	Slc4a1	Ae1|CD233|Empb3|l11Jus51	solute carrier family 4 (anion exchanger), member 1	protein-coding
common_peak1-7823-36-14-1.57243049055924-4.02188667233815	chr1	125700223	125701755	+	0	NA	intron (NM_199021, intron 3 of 25)	intron (NM_199021, intron 3 of 25)	241147	NM_199021	269109	Mm.483255	NM_199021	ENSMUSG00000036815	Dpp10	6430601K09Rik|DPP X|Dprp3	dipeptidylpeptidase 10	protein-coding
common_peak2-30142-55-68-0.096095414374533-0.356097801671622	chr6	145249298	145251027	+	0	NA	Intergenic	MTEa|LTR|MaLR	51090	NR_045598	100039495	Mm.121014	NR_045598	ENSMUSG00000086013	Gm15706	OTTMUSG00000025463	predicted gene 15706	ncRNA
common_peak1-10635-27-41--0.400771471883525-0.542588322087496	chr14	45657931	45658920	+	0	NA	Intergenic	Intergenic	50639	NM_008964	19217	Mm.4630	NM_008964	ENSMUSG00000037759	Ptger2	EP2|Ptgerep2	prostaglandin E receptor 2 (subtype EP2)	protein-coding
common_peak1-9117-10-8-0.186490343566457-1.078512453669	chr11	74555335	74555993	+	0	NA	Intergenic	Intergenic	-17778	NM_013625	18472	Mm.397111	NM_013625	ENSMUSG00000020745	Pafah1b1	LIS-1|Lis1|MMS10-U|Mdsh|Ms10u|Pafaha	platelet-activating factor acetylhydrolase, isoform 1b, subunit 1	protein-coding
common_peak2-28030-13-21--0.680959587999529-0.607095980551316	chr4	53631349	53632247	+	0	NA	intron (NM_133891, intron 15 of 15)	B1_Mur1|SINE|Alu	-12545	NM_176966	319636	Mm.103464	NM_176966	ENSMUSG00000054752	Fsd1l	A230072O16Rik|Ccdc10|Csdufd1|Fsd1nl|OTTMUSG00000007002	fibronectin type III and SPRY domain containing 1-like	protein-coding
common_peak1-12731-119-160-0.207521043015428-0.72568316258107	chr18	53861636	53863510	+	0	NA	intron (NM_178686, intron 18 of 20)	intron (NM_178686, intron 18 of 20)	41628	NM_178686	225523	Mm.193678	NM_178686	ENSMUSG00000048799	Cep120	A230075C01|AU016693|Ccdc100	centrosomal protein 120	protein-coding
unique_peak1-3780-18-3-2.31291915122835-3.35694334496952	chr19	55778879	55779704	+	0	NA	Intergenic	Intergenic	-2597	NR_045318	77594	Mm.329924	NR_045318	ENSMUSG00000097632	4930552P12Rik	-	RIKEN cDNA 4930552P12 gene	ncRNA
unique_peak1-3576-16-4-1.7963355473807-2.18192634393779	chr19	29064080	29064897	+	0	NA	promoter-TSS (NM_025950)	promoter-TSS (NM_025950)	-496	NM_025950	67072	Mm.78875	NM_025950	ENSMUSG00000024780	Cdc37l1	2700033A15Rik|BB159850|Cdc37l|Harc	cell division cycle 37-like 1	protein-coding
unique_peak1-3498-12-0-3.64877598508764-4.21441993929574	chr19	12832120	12832746	+	0	NA	Intergenic	Intergenic	7689	NM_170786	12803	Mm.290924	NM_053007	ENSMUSG00000079415	Cntf	AI429687	ciliary neurotrophic factor	protein-coding
unique_peak1-2910-10-2-1.77145284428761-2.09384600808989	chr17	46882604	46883205	+	0	NA	intron (NM_028065, intron 2 of 5)	B2_Mm2|SINE|B2	6257	NM_028065	72029	Mm.240325	NM_028065	ENSMUSG00000023973	Cnpy3	1600025D17Rik|2410050O22Rik|AI413153|CAG4A|ERDA5|PRAT4A|Tnrc5	canopy 3 homolog (zebrafish)	protein-coding
common_peak2-26935-6-15--1.4346018896197-1.16633110333236	chr2	164070460	164071030	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-6668	NM_017390	53878	Mm.99395	NM_017390	ENSMUSG00000040132	Svs2	BB115391|Semg1|SvsII	seminal vesicle secretory protein 2	protein-coding
unique_peak1-7291-10-11--0.228547155712387-0.31137425193576	chr9	108078882	108079540	+	0	NA	intron (NM_007567, intron 1 of 11)	ORR1C2|LTR|MaLR	13503	NM_007567	12217	Mm.20425	NM_007567	ENSMUSG00000032589	Bsn	-	bassoon	protein-coding
common_peak2-22871-17-12-0.517856620063946-0.647240723060192	chr14	30549119	30549707	+	0	NA	Intergenic	RMER17B|LTR|ERVK	-14363	NM_009785	12294	Mm.386754	NM_009785	ENSMUSG00000021991	Cacna2d3	Cacnad3	calcium channel, voltage-dependent, alpha2/delta subunit 3	protein-coding
common_peak1-8946-31-37--0.0226888426304619-0.301029995663945	chr11	54027829	54029276	+	0	NA	Intergenic	Intergenic	-1762	NR_045506	71056	Mm.56332	NR_045506	ENSMUSG00000086209	4933405E24Rik	-	RIKEN cDNA 4933405E24 gene	ncRNA
common_peak2-29069-40-46-0.104386831073461-0.357020589591567	chr5	117362757	117364275	+	0	NA	Intergenic	ORR1A2|LTR|MaLR	202486	NM_001122666	71954	Mm.34456	NM_178622	ENSMUSG00000066900	Suds3	2400003N08Rik|2410008L21Rik|AU067672|mSds3	suppressor of defective silencing 3 homolog (S. cerevisiae)	protein-coding
common_peak1-13719-9-6-0.382258484346616-1.11707584880836	chr2	30827745	30828214	+	0	NA	TTS (NM_144885)	TTS (NM_144885)	-4541	NM_144884	30931	Mm.154994	NM_144884	ENSMUSG00000026849	Tor1a	DQ2|Dyt1|torsinA	torsin family 1, member A (torsin A)	protein-coding
common_peak1-10333-16-7-1.11826364226806-1.23399803405144	chr13	74390042	74390881	+	0	NA	intron (NM_009644, intron 4 of 10)	Lx9|LINE|L1	39296	NM_009644	11624	Mm.290446	NM_009644	ENSMUSG00000021575	Ahrr	mKIAA1234	aryl-hydrocarbon receptor repressor	protein-coding
common_peak2-29289-24-20-0.400892479988956-0.591915184368645	chr5	144014362	144015126	+	0	NA	3' UTR (NM_017467, exon 7 of 7)	3' UTR (NM_017467, exon 7 of 7)	16957	NM_017467	54201	Mm.6666	NM_017467	ENSMUSG00000046658	Zfp316	Emzf1|Mzf3|Znf316	zinc finger protein 316	protein-coding
common_peak2-19524-50-73--0.168513049149998-0.377610692194725	chr1	52231885	52233286	+	0	NA	intron (NM_001081081, intron 14 of 17)	intron (NM_001081081, intron 14 of 17)	56119	NM_001205313	20846	Mm.277406	NM_009283	ENSMUSG00000026104	Stat1	2010005J02Rik|AA408197	signal transducer and activator of transcription 1	protein-coding
common_peak2-28894-14-10-0.439784541720347-0.519648556297791	chr5	90640216	90640721	+	0	NA	Intergenic	ID_B1|SINE|B4	12553	NR_028088	231430	Mm.319697	NM_001033310	ENSMUSG00000035505	Cox18	BC038311	cytochrome c oxidase assembly protein 18	protein-coding
unique_peak2-35020-2-5--1.50241675698448-1.08602067057793	chr15	102164026	102164460	+	0	NA	intron (NM_021713, intron 2 of 6)	B1_Mur4|SINE|Alu	2103	NM_021713	60315	Mm.251638	NM_021713	ENSMUSG00000001285	Myg1	0610023A07Rik|2810433J21Rik|5830429P19Rik|AI325965|Gamm1	melanocyte proliferating gene 1	protein-coding
common_peak2-26653-11-24--1.13516260552311-1.3750876294627	chr2	120730611	120731482	+	0	NA	intron (NM_009461, intron 29 of 46)	intron (NM_009461, intron 29 of 46)	54654	NR_038350	100502700	Mm.330516	NR_038349	ENSMUSG00000087519	AV039307	-	expressed sequence AV039307	ncRNA
common_peak2-22969-9-7-0.18961340640422-1.05908390183068	chr14	54573649	54574080	+	0	NA	Intergenic	Intergenic	288249	NM_001205242	100568452	Mm.213248	NM_001205242		A430107P09Rik	Va10	RIKEN cDNA A430107P09 gene	protein-coding
unique_peak2-36383-3-6--1.22133801201688-1.08602067057793	chr2	119618557	119619039	+	0	NA	Intergenic	RLTR20A2|LTR|ERVK	-4678	NM_001290800	22174	Mm.2901	NM_019392	ENSMUSG00000027298	Tyro3	AI323366|Brt|Dtk|Etk-2|Rse|Sky|TK19-2|Tif|etk2/tyro3	TYRO3 protein tyrosine kinase 3	protein-coding
common_peak1-8784-13-14--0.12841856497075-0.301029995663977	chr11	8761379	8762003	+	0	NA	Intergenic	Lx8|LINE|L1	149449	NM_008316	15574	Mm.42201	NM_008316	ENSMUSG00000020413	Hus1	mHus1	Hus1 homolog (S. pombe)	protein-coding
common_peak1-15216-8-3-1.00522241794757-1.39487600375387	chr4	133103432	133103865	+	0	NA	Intergenic	Intergenic	-1706	NM_010948	18221	Mm.69	NM_010948	ENSMUSG00000028851	Nudc	SIG-92|Silg92	nuclear distribution gene C homolog (Aspergillus)	protein-coding
unique_peak1-609-7-2-1.21412832957703-1.45399745587252	chr10	21789571	21789977	+	0	NA	Intergenic	Intergenic	-1889	NM_053264	114671	Mm.288194	NM_053264	ENSMUSG00000069712	4930444G20Rik	-	RIKEN cDNA 4930444G20 gene	protein-coding
unique_peak1-4506-25-11-1.27688740462395-2.12469164491494	chr3	21953083	21953960	+	0	NA	Intergenic	ORR1C2|LTR|MaLR	-22053	NM_030732	81004	Mm.202966	NM_030732	ENSMUSG00000027630	Tbl1xr1	8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1	transducin (beta)-like 1X-linked receptor 1	protein-coding
unique_peak1-3971-12-6-0.841421063030034-1.58711810488664	chr2	32440698	32441335	+	0	NA	Intergenic	Intergenic	-1582	NM_001276425	20448	Mm.27446	NM_011373	ENSMUSG00000079442	St6galnac4	SIAT7-D|ST6GalNAcIV|Siat7d	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4	protein-coding
common_peak2-24813-85-94-0.385547639793703-1.20036064309688	chr17	70747378	70749262	+	0	NA	Intergenic	Intergenic	-25812	NM_177639	224997	Mm.311840	NM_027712	ENSMUSG00000003279	Dlgap1	4933422O14Rik|9630002F18|AI845682|AI848168|BB075781|D17Bwg0511e|GKAP/SAPAP|GKPA/SAPAP|Gkap|Sapap1|mKIAA4162	discs, large (Drosophila) homolog-associated protein 1	protein-coding
common_peak1-9177-14-11-0.314253659636488-0.435191258261915	chr11	78367176	78367880	+	0	NA	Intergenic	Intergenic	-3291	NM_133706	69071	Mm.29431	NM_133706	ENSMUSG00000037278	Tmem97	1810014L12Rik|AI115531|AL022956|D11Bhm182e	transmembrane protein 97	protein-coding
common_peak2-21521-22-14-0.740393509478886-0.983972868822056	chr11	94548592	94549393	+	0	NA	Intergenic	Intergenic	-10185	NM_145828	217119	Mm.100638	NM_145828	ENSMUSG00000020868	Xylt2	E030002B02Rik|XT-II|XT2|xylT-II	xylosyltransferase II	protein-coding
common_peak2-19927-10-8-0.186490343566457-1.078512453669	chr1	127232477	127232933	+	0	NA	Intergenic	Intergenic	99599	NM_023735	74117	Mm.183102	NM_023735	ENSMUSG00000026341	Actr3	1200003A09Rik|Arp3	ARP3 actin-related protein 3	protein-coding
common_peak1-9836-14-9-0.577288065470282-0.630231561310125	chr12	76403314	76404191	+	0	NA	Intergenic	Intergenic	-5548	NM_023275	80837	Mm.27467	NM_023275	ENSMUSG00000046768	Rhoj	1110005O19Rik|AW210585|Arhj|TC10L|TCL	ras homolog gene family, member J	protein-coding
common_peak2-27649-51-49-0.431067635827849-0.910002444715788	chr3	108013364	108014410	+	0	NA	promoter-TSS (NM_001289545)	promoter-TSS (NM_001289545)	-442	NM_175183	72522	Mm.187326	NM_175183	ENSMUSG00000048997	Atxn7l2	2610528J18Rik	ataxin 7-like 2	protein-coding
common_peak1-16172-120-147-0.343508254862799-1.3933920553082	chr5	90365450	90367457	+	0	NA	Intergenic	Intergenic	-54094	NM_001081401	330119	Mm.133062	NM_177872	ENSMUSG00000043635	Adamts3	1100001H14Rik|6330442E02Rik	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 3	protein-coding
common_peak2-19847-9-10--0.269818212233077-1.05503135781948	chr1	91054970	91055541	+	0	NA	Intergenic	Intergenic	34872	NR_106129	102465771		NR_106129		Mir7669	mmu-mir-7669	microRNA mir-7669	ncRNA
unique_peak1-2608-8-1-2.00522241794757-2.05605744720049	chr16	33691228	33691729	+	0	NA	intron (NM_175256, intron 1 of 14)	intron (NM_175256, intron 1 of 14)	6926	NM_175256	77446	Mm.245741	NM_172934	ENSMUSG00000075254	Heg1	4632417D23Rik|5530401I02Rik|9530025L16Rik|BC038614|Gm629|OTTMUSG00000027315	HEG homolog 1 (zebrafish)	protein-coding
common_peak1-18080-34-29-0.475177931392747-0.820829064533854	chr8	66486033	66487238	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-55668	NM_001195687	244495	Mm.485331	NM_001195687	ENSMUSG00000094443	Gm4975	EG244495|Sgo2B	predicted gene 4975	protein-coding
unique_peak2-32662-6-8--0.60452689106201-1.03789460276074	chr1	135169830	135170421	+	0	NA	intron (NM_001160268, intron 8 of 22)	intron (NM_001160268, intron 8 of 22)	-3740	NR_037984	100502933	Mm.487491	NR_037984		Gm19461	-	predicted gene, 19461	ncRNA
unique_peak2-38062-30-69--0.959607607453093-2.5917804265315	chr6	47680675	47682157	+	0	NA	Intergenic	Intergenic	12814	NR_002841	19799		NR_002841		Rn4.5s	-	4.5S RNA	rRNA
unique_peak2-36828-7-11--0.785871670422967-1.21681515183528	chr3	88509226	88509617	+	0	NA	intron (NM_028814, intron 10 of 13)	intron (NM_028814, intron 10 of 13)	-11355	NM_009069	19769	Mm.4009	NM_009069		Rit1	RIBB|ROC1|Rit	Ras-like without CAAX 1	protein-coding
common_peak2-30281-22-17-0.477359103645092-0.633951497070961	chr7	16844680	16845527	+	0	NA	promoter-TSS (NM_001173550)	promoter-TSS (NM_001173550)	-214	NM_007577	12273	Mm.247623	NM_007577	ENSMUSG00000049130	C5ar1	C5aR|C5r1|Cd88|D7Msu1	complement component 5a receptor 1	protein-coding
common_peak1-14791-17-10-0.75886471956774-0.917676348953458	chr3	89801734	89802425	+	0	NA	promoter-TSS (NR_045749)	promoter-TSS (NR_045749)	559	NM_011826	23897	Mm.256035	NM_011826	ENSMUSG00000027944	Hax1	HAX-1|HSP1BP-1|Hs1bp1|SIG-111|Silg111|mHAX-1s	HCLS1 associated X-1	protein-coding
common_peak1-13986-11-8-0.338768582809301-1.14218153353838	chr2	103072927	103073574	+	0	NA	Intergenic	Intergenic	70103	NM_007914	13661	Mm.10724	NM_007914	ENSMUSG00000012350	Ehf	9030625L19Rik|AU019492	ets homologous factor	protein-coding
common_peak2-29088-21-14-0.662598669657717-0.879255460030357	chr5	121583735	121584378	+	0	NA	3' UTR (NM_001109992, exon 16 of 16)	3' UTR (NM_001109992, exon 16 of 16)	57350	NM_001109992	19247	Mm.8681	NM_011202	ENSMUSG00000043733	Ptpn11	2700084A17Rik|AW536184|PTP1D|PTP2C|SAP-2|SH-PTP2|SH-PTP3|SHP-2|Shp2|Syp	protein tyrosine phosphatase, non-receptor type 11	protein-coding
common_peak1-17714-11-10-0.0492619656143161-0.31137425193576	chr7	79315482	79316067	+	0	NA	intron (NM_001024703, intron 14 of 22)	MIRm|SINE|MIR	135707	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding
common_peak1-14973-29-57--0.745690914512461-1.45455780655082	chr3	106546938	106547790	+	0	NA	Intergenic	L1Md_F2|LINE|L1	22764	NM_001286685	321000	Mm.259638	NM_028081	ENSMUSG00000056260	Lrif1	2010012G17Rik|4933421E11Rik|AI450568	ligand dependent nuclear receptor interacting factor 1	protein-coding
common_peak1-12588-37-39-0.204064976598456-0.426350872773373	chr18	20895515	20896463	+	0	NA	intron (NM_019737, intron 1 of 8)	ID_B1|SINE|B4	8916	NM_019737	56386	Mm.393827	NM_019737	ENSMUSG00000056124	B4galt6	AA536803|AU022389	UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 6	protein-coding
common_peak1-13160-65-54-0.710806225952467-2.27623938954082	chr19	10604586	10606479	+	0	NA	intron (NM_172302, intron 2 of 9)	intron (NM_172302, intron 2 of 9)	5798	NM_172302	269061	Mm.490260	NM_172302	ENSMUSG00000034820	Cpsf7	5730453I16Rik|AL022757|C330017N18Rik	cleavage and polyadenylation specific factor 7	protein-coding
common_peak1-11173-17-22--0.305265617851975-0.348739088570342	chr15	76351221	76351861	+	0	NA	intron (NM_130893, intron 1 of 1)	intron (NM_130893, intron 1 of 1)	1018	NM_130893	170729	Mm.218747	NM_130893	ENSMUSG00000048385	Scrt1	-	scratch homolog 1, zinc finger protein (Drosophila)	protein-coding
common_peak2-26726-31-58--0.657404378548718-1.31742449843084	chr2	131203741	131205497	+	0	NA	Intergenic	MLT1D|LTR|MaLR	-25991	NM_178607	51902	Mm.477523	NM_178607	ENSMUSG00000048911	Rnf24	2810473M14Rik|4930505A13Rik|AI317164|C86507|D2Ertd504e	ring finger protein 24	protein-coding
unique_peak1-7115-15-7-1.01216475055566-1.08658567012551	chr9	45300612	45301604	+	0	NA	intron (NM_001081270, intron 3 of 32)	B3|SINE|B2	-61793	NR_040732	74602	Mm.394117	NR_040732	ENSMUSG00000097074	4833428L15Rik	-	RIKEN cDNA 4833428L15 gene	ncRNA
common_peak1-18683-17-24--0.425559851569687-0.427564438475253	chr8	119910989	119911701	+	0	NA	intron (NM_001163262, intron 3 of 20)	intron (NM_001163262, intron 3 of 20)	38275	NM_028941	74440	Mm.233181	NM_028941	ENSMUSG00000034390	Cmip	4933407C03Rik|5830471E12Rik|AI314065|AI464126	c-Maf inducing protein	protein-coding
unique_peak2-39723-5-7--0.704380336005853-1.01466476204226	chr9	121036714	121037166	+	0	NA	intron (NM_177589, intron 30 of 36)	intron (NM_177589, intron 30 of 36)	149350	NM_177589	209012	Mm.371804	NM_177589	ENSMUSG00000040936	Ulk4	4932415A06Rik|A730098P15	unc-51-like kinase 4	protein-coding
common_peak2-24745-14-14--0.00767443525087419-0.308519316180257	chr17	49428283	49428857	+	0	NA	Intergenic	RMER19B|LTR|ERVK	23715	NR_033486	100415784	Mm.400421	NR_033486		Gm17830	-	predicted gene, 17830	ncRNA
unique_peak2-34288-12-23--0.936186515633517-0.912223620338476	chr13	73937378	73938170	+	0	NA	intron (NM_011390, intron 15 of 23)	intron (NM_011390, intron 15 of 23)	36629	NM_011390	20499	Mm.275800	NM_011390	ENSMUSG00000017756	Slc12a7	AA408796|D13Ertd261e|Kcc4	solute carrier family 12, member 7	protein-coding
common_peak2-22635-58-78--0.00783081328660629-0.302413108461692	chr13	91223354	91224586	+	0	NA	intron (NM_025770, intron 3 of 7)	intron (NM_025770, intron 3 of 7)	139622	NM_025770	66795	Mm.235385	NM_025770	ENSMUSG00000021619	Atg10	5330424L23Rik|5430428K15Rik|AI852123|APG10|Agp10|Apg10l|Apg10p|Atg10l	autophagy related 10	protein-coding
common_peak1-18757-33-19-1.00940946763817-1.9602491241746	chr8	126612684	126614184	+	0	NA	Intergenic	B2_Mm2|SINE|B2	66061	NM_001029876	382038	Mm.334891	NM_001029876	ENSMUSG00000031976	Urb2	C77575|mKIAA0133	URB2 ribosome biogenesis 2 homolog (S. cerevisiae)	protein-coding
unique_peak2-34512-5-6--0.511735258063458-0.947717972411649	chr14	51089271	51089612	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-3291	NM_207133	258233	Mm.377278	NM_207133		Olfr741	GA_x5J8B7TYL6J-3-280|GA_x5J8B7U07Q4-325-757|GA_x6K02T2PMLR-6197851-6198786|MOR106-10|MOR106-15	olfactory receptor 741	protein-coding
common_peak1-10887-11-7-0.508693584251613-1.21681515183528	chr15	83590808	83591260	+	0	NA	Intergenic	Intergenic	-19419	NM_172610	223726	Mm.36395	NM_172610	ENSMUSG00000041708	Mpped1	6230403M19|AW456965|D15Bwg0669e	metallophosphoesterase domain containing 1	protein-coding
common_peak1-13327-41-43-0.241717086211363-0.486454540233427	chr19	42779608	42780556	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	47183	NM_029011	74580	Mm.329858	NM_029011	ENSMUSG00000060224	Pyroxd2	3830409H07Rik|4833409A17Rik	pyridine nucleotide-disulphide oxidoreductase domain 2	protein-coding
unique_peak2-39816-5-15--1.70438033600585-1.4372489031793	chrX	36807351	36808063	+	0	NA	Intergenic	Intergenic	108264	NM_001177380	78631	Mm.243738	NM_001177380	ENSMUSG00000079619	Cypt15	1700085A12Rik	cysteine-rich perinuclear theca 15	protein-coding
common_peak1-7904-19-20-0.0103699038829257-0.306326795069978	chr1	135765839	135766836	+	0	NA	Intergenic	Intergenic	37413	NM_054076	269120	Mm.59985	NM_054076	ENSMUSG00000010311	Optc	-	opticin	protein-coding
common_peak1-18151-25-27-0.0544949832875021-0.316543811862083	chr8	11497148	11498028	+	0	NA	promoter-TSS (NM_001190357)	promoter-TSS (NM_001190357)	20	NM_026995	69225	Mm.64911	NM_026995	ENSMUSG00000031505	Carkd	0710008K08Rik|2810407E01Rik	carbohydrate kinase domain containing	protein-coding
common_peak1-7891-38-20-1.17913523651977-2.88064294409843	chr1	134803219	134804583	+	0	NA	intron (NM_010732, intron 1 of 1)	intron (NM_010732, intron 1 of 1)	26969	NM_010732	16980	Mm.39640	NM_010732	ENSMUSG00000026443	Lrrn2	5730406J09Rik|NLRR-2	leucine rich repeat protein 2, neuronal	protein-coding
common_peak2-28533-56-57-0.377614830311671-0.835692031846851	chr5	137510135	137511261	+	0	NA	TTS (NM_007457)	TTS (NM_007457)	4533	NM_001039385	381677	Mm.389697	NM_001039385	ENSMUSG00000037428	Vgf	Gm1052	VGF nerve growth factor inducible	protein-coding
common_peak1-15831-50-91--0.482621639578061-1.16916033364214	chr5	130170590	130172591	+	0	NA	intron (NM_172462, intron 1 of 2)	URR1B|DNA|MER1_type	4373	NM_172462	22648	Mm.135067	NM_172462	ENSMUSG00000051034	Zfp11	6720465D24|Krox-6|Zfp-11	zinc finger protein 11	protein-coding
unique_peak1-2955-16-6-1.31090872021046-1.49151883326344	chr17	70963600	70964056	+	0	NA	intron (NM_001128180, intron 2 of 9)	(TC)n|Simple_repeat|Simple_repeat	52741	NM_001128181	224997	Mm.311840	NM_027712	ENSMUSG00000003279	Dlgap1	4933422O14Rik|9630002F18|AI845682|AI848168|BB075781|D17Bwg0511e|GKAP/SAPAP|GKPA/SAPAP|Gkap|Sapap1|mKIAA4162	discs, large (Drosophila) homolog-associated protein 1	protein-coding
common_peak1-8980-12-17--0.521149016354673-0.417187467413082	chr11	58977921	58978438	+	0	NA	promoter-TSS (NM_173785)	promoter-TSS (NM_173785)	-932	NM_173785	216792	Mm.266175	NM_173785	ENSMUSG00000049287	Iba57	4930543L23Rik|A230051G13Rik|C1orf69	IBA57, iron-sulfur cluster assembly homolog (S. cerevisiae)	protein-coding
common_peak2-21506-34-25-0.681628808860174-1.24799833770813	chr11	93988126	93989048	+	0	NA	Intergenic	PB1D9|SINE|Alu	83068	NM_001025429	70834	Mm.260737	NM_027569	ENSMUSG00000020859	Spag9	3110018C07Rik|4733401I23Rik|4831406C20Rik|AW552012|JLP|JSAP2|JSAP2a|Jip4|Mapk8ip4|syd1	sperm associated antigen 9	protein-coding
common_peak2-24329-113-82-1.07363031434978-7.77732060073077	chr17	3081363	3082894	+	0	NA	intron (NR_003519, intron 1 of 7)	intron (NR_003519, intron 1 of 7)	2055	NR_003519	328734	Mm.335641	NR_003519		Pisd-ps2	D030013I16Rik	phosphatidylserine decarboxylase, pseudogene 2	pseudo
common_peak1-7940-13-22--0.745089925419244-0.690311289528838	chr1	152901992	152902770	+	0	NA	Intergenic	CT-rich|Low_complexity|Low_complexity	-61816	NM_001024720	545370	Mm.379425	NM_001024720	ENSMUSG00000066842	Hmcn1	EG545370|Gm201	hemicentin 1	protein-coding
unique_peak2-37065-6-17--1.60452689106201-1.49151883326343	chr3	144201976	144202831	+	0	NA	intron (NM_011828, intron 1 of 6)	intron (NM_011828, intron 1 of 6)	30777	NM_011828	23908	Mm.12863	NM_011828	ENSMUSG00000040151	Hs2st1	AW214369|Hs2st|mKIAA0448	heparan sulfate 2-O-sulfotransferase 1	protein-coding
common_peak2-27716-13-17--0.391452970804544-0.364171515310935	chr3	122508812	122509564	+	0	NA	intron (NM_153422, intron 11 of 20)	intron (NM_153422, intron 11 of 20)	-4290	NR_045168	71647	Mm.449992	NR_045168		4930447N08Rik	-	RIKEN cDNA 4930447N08 gene	ncRNA
unique_peak1-6105-9-4-0.867685311516858-1.36011389749466	chr6	125485543	125486055	+	0	NA	Intergenic	Intergenic	-17167	NM_011708	22371	Mm.22339	NM_011708	ENSMUSG00000001930	Vwf	6820430P06Rik|AI551257|B130011O06Rik|C630030D09|F8VWF|VWD	Von Willebrand factor homolog	protein-coding
common_peak2-22628-10-6-0.549060422951165-1.21398586181642	chr13	84222502	84222806	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-139247	NR_029418	72745	Mm.295063	NM_175187	ENSMUSG00000035762	Tmem161b	2810446P07Rik|AI843389	transmembrane protein 161B	protein-coding
common_peak2-31695-35-31-0.431370258462504-0.725458513490992	chr9	14613944	14615095	+	0	NA	intron (NM_018736, intron 10 of 19)	intron (NM_018736, intron 10 of 19)	25368	NM_018736	17535	Mm.149071	NM_018736	ENSMUSG00000031928	Mre11a	Mre11|Mre11b	meiotic recombination 11 homolog A (S. cerevisiae)	protein-coding
common_peak2-30093-119-166-0.154733628655992-0.547921164264813	chr6	134926475	134928801	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-4381	NM_001109914	381823	Mm.296104	NM_001109914	ENSMUSG00000090698	Apold1	Gm1075	apolipoprotein L domain containing 1	protein-coding
common_peak2-27016-52-43-0.648828371628402-1.62370182176242	chr2	173266620	173267826	+	0	NA	Intergenic	Intergenic	-80870	NM_028158	72221	Mm.46132	NM_028158	ENSMUSG00000027518	1700021F07Rik	-	RIKEN cDNA 1700021F07 gene	protein-coding
unique_peak1-3804-21-3-2.56948926526624-4.33845181153635	chr19	60934536	60935584	+	0	NA	intron (NM_053198, intron 2 of 13)	intron (NM_053198, intron 2 of 13)	2273	NM_053198	94281	Mm.48179	NM_053198		Sfxn4	-	sideroflexin 4	protein-coding
unique_peak1-5070-9-0-3.18961340640422-3.01029995663981	chr4	139543818	139544349	+	0	NA	Intergenic	Intergenic	-20142	NM_173427	242721	Mm.60400	NM_173427	ENSMUSG00000078234	Klhdc7a	B230308G19Rik	kelch domain containing 7A	protein-coding
unique_peak1-2714-35-7-2.4313702584625-6.55885943208411	chr16	92158126	92159718	+	0	NA	Intergenic	Intergenic	100341	NM_080456	121022	Mm.217354	NM_080456	ENSMUSG00000039680	Mrps6	AW046321	mitochondrial ribosomal protein S6	protein-coding
unique_peak1-2040-10-4-1.03448725012141-1.5150158574804	chr15	25773504	25774164	+	0	NA	intron (NM_001034851, intron 1 of 8)	intron (NM_001034851, intron 1 of 8)	781	NM_001034851	66270	Mm.25311	NM_025459	ENSMUSG00000022270	Fam134b	1810015C04Rik|AU015349	family with sequence similarity 134, member B	protein-coding
unique_peak2-33706-8-14--0.901668177660948-0.660903317613906	chr11	109425856	109426577	+	0	NA	intron (NM_001166177, intron 4 of 4)	L4|LINE|RTE	21191	NM_001166177	74008	Mm.482224	NM_028710	ENSMUSG00000020604	Arsg	6330406P08Rik|AI846872	arylsulfatase G	protein-coding
unique_peak1-1899-8-2-1.42025991722641-1.65811743852845	chr14	65880350	65880849	+	0	NA	intron (NM_021458, intron 1 of 6)	CpG	701	NM_021458	14365	Mm.214687	NM_021458		Fzd3	AU020229|D930050A07Rik|Fz3	frizzled homolog 3 (Drosophila)	protein-coding
common_peak2-29348-35-48--0.183339585652704-0.360715883817177	chr5	149183629	149184524	+	0	NA	intron (NM_007513, intron 1 of 12)	RLTR28B|LTR|ERVL	27404	NM_007513	11987	Mm.275489	NM_007513	ENSMUSG00000041313	Slc7a1	4831426K01Rik|AI447493|Atrc-1|Atrc1|Cat1|Rec-1|Rev-1|mCAT-1	solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	protein-coding
common_peak2-29090-16-26--0.636623859895407-0.713114929964887	chr5	121660547	121661279	+	0	NA	Intergenic	ID_B1|SINE|B4	6403	NM_011290	19988	Mm.262021	NM_011290	ENSMUSG00000029614	Rpl6	Taxreb107	ribosomal protein L6	protein-coding
common_peak1-13693-16-22--0.405298313788951-0.440610794044987	chr2	30205574	30206396	+	0	NA	intron (NM_001289710, intron 4 of 9)	intron (NM_001289710, intron 4 of 9)	8851	NM_139302	227700	Mm.33343	NM_139302	ENSMUSG00000026860	Sh3glb2	SPAS-1	SH3-domain GRB2-like endophilin B2	protein-coding
common_peak2-22266-60-76-0.0875053209256302-0.350518480579152	chr13	5860405	5861421	+	0	NA	exon (NM_011803, exon 1 of 4)	exon (NM_011803, exon 1 of 4)	178	NM_011803	23849	Mm.275036	NM_011803	ENSMUSG00000000078	Klf6	AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9	Kruppel-like factor 6	protein-coding
common_peak2-28854-18-38--0.972483067633897-1.53432270224293	chr5	73292745	73293326	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-12566	NM_001113423	75991	Mm.121285	NM_153567	ENSMUSG00000036087	Slain2	5033405K12Rik|8030444K12Rik|AI596370	SLAIN motif family, member 2	protein-coding
common_peak2-31086-14-28--0.958764834769927-1.16796998271031	chr8	25100960	25101763	+	0	NA	intron (NM_177086, intron 5 of 6)	intron (NM_177086, intron 5 of 6)	321228	NM_177086	320158	Mm.121274	NM_177086	ENSMUSG00000037492	Zmat4	9630048M01Rik	zinc finger, matrin type 4	protein-coding
common_peak2-31375-11-14--0.398197011356905-0.379391706698377	chr8	85060050	85060654	+	0	NA	Intergenic	L1MC5|LINE|L1	-133867	NM_008357	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
unique_peak1-6806-10-2-1.77145284428761-2.09384600808989	chr8	71463050	71463596	+	0	NA	Intergenic	Intergenic	58869	NM_008509	16956	Mm.1514	NM_008509	ENSMUSG00000015568	Lpl	-	lipoprotein lipase	protein-coding
unique_peak1-7002-8-4-0.683294323060208-1.21878474469819	chr8	122531280	122531736	+	0	NA	intron (NM_030209, intron 1 of 14)	intron (NM_030209, intron 1 of 14)	15138	NM_030209	78892	Mm.264680	NM_030209	ENSMUSG00000031825	Crispld2	1810049K24Rik|Lcrisp2|Lgl1|coffeecrisp	cysteine-rich secretory protein LCCL domain containing 2	protein-coding
unique_peak2-37364-2-7--1.91745425626332-1.45399745587252	chr4	136117392	136117702	+	0	NA	intron (NM_133872, intron 8 of 18)	intron (NM_133872, intron 8 of 18)	41091	NM_133872	99982	Mm.28540	NM_133872	ENSMUSG00000036940	Kdm1a	1810043O07Rik|AA408884|Aof2|D4Ertd478e|Kdm1|Lsd1|mKIAA0601	lysine (K)-specific demethylase 1A	protein-coding
common_peak2-19890-7-8--0.370834171144123-1.00793137938329	chr1	98084395	98084871	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-166298	NR_040467	73454	Mm.396229	NR_040467		1700063A18Rik	-	RIKEN cDNA 1700063A18 gene	ncRNA
common_peak1-16350-47-43-0.47540980612925-0.980945783223891	chr5	121204107	121205137	+	0	NA	exon (NM_145226, exon 15 of 16)	exon (NM_145226, exon 15 of 16)	-4765	NM_145227	246728	Mm.260926	NM_145227	ENSMUSG00000032690	Oas2	Oasl11	2'-5' oligoadenylate synthetase 2	protein-coding
unique_peak2-37312-0-6--3.64748585253182-1.56314192529759	chr4	124937046	124937538	+	0	NA	Intergenic	B4|SINE|B4	-132167	NM_153159	230738	Mm.402	NM_153159	ENSMUSG00000042677	Zc3h12a	BC036563|MCPIP|Mcpip1	zinc finger CCCH type containing 12A	protein-coding
unique_peak2-37247-6-11--1.01956439034085-1.32595962126035	chr4	99715440	99716072	+	0	NA	Intergenic	Intergenic	-52640	NM_013845	26563	Mm.57252	NM_013845	ENSMUSG00000035305	Ror1	2810404D04Rik|Ntrkr1|mRor1	receptor tyrosine kinase-like orphan receptor 1	protein-coding
unique_peak2-36833-16-21--0.341167976369236-0.392630012299441	chr3	88621068	88621908	+	0	NA	non-coding (NR_028359, exon 13 of 18)	non-coding (NR_028359, exon 13 of 18)	14921	NR_015498	319830	Mm.400394	NR_015498		1500004A13Rik	5430404N14Rik|BB132176	RIKEN cDNA 1500004A13 gene	ncRNA
common_peak2-29165-11-6-0.701338662194009-1.32595962126035	chr5	131813115	131813544	+	0	NA	Intergenic	Intergenic	-29937	NM_145218	212996	Mm.299204	NM_145218		Wbscr17	AA388321|E330012B09Rik	Williams-Beuren syndrome chromosome region 17 homolog (human)	protein-coding
common_peak2-28145-32-48--0.335617824895548-0.503563708672202	chr4	101264319	101265204	+	0	NA	intron (NM_001164583, intron 1 of 18)	RLTR17|LTR|ERVK	41562	NM_001164583	72685	Mm.76494	NM_198412	ENSMUSG00000028528	Dnajc6	2810027M23Rik|mKIAA0473	DnaJ (Hsp40) homolog, subfamily C, member 6	protein-coding
unique_peak1-3463-10-5-0.771452844287613-1.33892459842472	chr19	9899671	9900182	+	0	NA	Intergenic	L1_Mur2|LINE|L1	74097	NM_016692	16319	Mm.29755	NM_016692	ENSMUSG00000024660	Incenp	2700067E22Rik|AU019509|C130081E20|C77457	inner centromere protein	protein-coding
common_peak2-19530-7-10--0.660340788339108-1.12966497611638	chr1	74661775	74662239	+	0	NA	intron (NM_175031, intron 10 of 26)	B3|SINE|B2	13978	NM_175031	269209	Mm.310974	NM_175031	ENSMUSG00000033276	Stk36	1700112N14Rik|B930045J24|FU|Fused|mKIAA1278	serine/threonine kinase 36	protein-coding
common_peak1-10121-9-7-0.18961340640422-1.05908390183068	chr13	31469010	31469459	+	0	NA	Intergenic	MLT1A0|LTR|MaLR	-136279	NR_045957	73924	Mm.417825	NR_045957	ENSMUSG00000087460	4930401O12Rik	-	RIKEN cDNA 4930401O12 gene	ncRNA
unique_peak2-33210-11-16--0.578769256998726-0.503257505534083	chr10	115817737	115818492	+	0	NA	intron (NM_029928, intron 31 of 31)	intron (NM_029928, intron 31 of 31)	-37063	NR_028107	67342	Mm.245800	NM_026098	ENSMUSG00000020164	Kcnmb4os1	1700058G18Rik	potassium large conductance calcium-activated channel, subfamily M, beta member 4, opposite strand 1	ncRNA
common_peak2-29319-16-11-0.533301141546906-0.58239619684445	chr5	146700371	146701100	+	0	NA	Intergenic	MTA_Mm-int|LTR|MaLR	-9305	NM_007818	13112	Mm.332844	NM_007818	ENSMUSG00000056035	Cyp3a11	AI256190|Cyp3a|IIIAm1|Pcn	cytochrome P450, family 3, subfamily a, polypeptide 11	protein-coding
common_peak2-28931-105-102-0.634833383339948-3.11236527851724	chr5	96160657	96163059	+	0	NA	intron (NM_001270457, intron 3 of 3).3	intron (NM_001270457, intron 3 of 3).3	3334	NM_001270457	666203	Mm.380154	NM_001270457	ENSMUSG00000096139	Gm7978	EG666203	predicted gene 7978	protein-coding
common_peak2-30244-37-42-0.0997283167837208-0.340524918943711	chr7	5037914	5039054	+	0	NA	intron (NM_010147, intron 3 of 11)	B1_Mus2|SINE|Alu	6647	NM_001252454	13854	Mm.3091	NM_010147	ENSMUSG00000035203	Epn1	AA269831|Ibp1	epsin 1	protein-coding
common_peak2-21145-24-23-0.208247402046561-0.407645899519042	chr11	55468231	55469172	+	0	NA	Intergenic	L2|LINE|L2	-47001	NM_020492	14654	Mm.89320	NM_020492		Glra1	nmf11|oscillator|ot|spasmodic|spd	glycine receptor, alpha 1 subunit	protein-coding
common_peak2-20113-14-13-0.0918612383000403-0.332077462497413	chr1	161969118	161969694	+	0	NA	Intergenic	Intergenic	-5105	NR_028111	67647	Mm.171518	NM_001024470	ENSMUSG00000090394	4930523C07Rik	-	RIKEN cDNA 4930523C07 gene	protein-coding
common_peak2-20826-29-35--0.0576349208272013-0.301029995663967	chr10	128459104	128460159	+	0	NA	Intergenic	Intergenic	11288	NM_146862	258861	Mm.377724	NM_146862	ENSMUSG00000063374	Olfr763	MOR269-2	olfactory receptor 763	protein-coding
unique_peak2-34386-5-12--1.40482005414695-1.62698961692433	chr13	119408786	119409385	+	0	NA	Intergenic	Intergenic	64110	NR_045982	75890	Mm.141235	NR_045982		1700003P14Rik	1700030O10Rik|4930584L06Rik	RIKEN cDNA 1700003P14 gene	ncRNA
common_peak2-21101-6-13--1.2419568116773-1.58711810488664	chr11	51916785	51917328	+	0	NA	intron (NM_019411, intron 1 of 6)	intron (NM_019411, intron 1 of 6)	4730	NM_019411	19052	Mm.260288	NM_019411		Ppp2ca	PP2A|R75353	protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform	protein-coding
unique_peak2-38798-8-15--0.994777582052429-0.771068449301683	chr7	130981842	130982314	+	0	NA	Intergenic	L1ME4a|LINE|L1	-144617	NM_001252072	628779	Mm.40210	NM_001252072	ENSMUSG00000078591	Hs3st4	EG628779|Gm6915	heparan sulfate (glucosamine) 3-O-sulfotransferase 4	protein-coding
common_peak1-7516-27-20-0.599228528116475-0.90781512069806	chr1	21218366	21219276	+	0	NA	intron (NM_029398, intron 4 of 4)	intron (NM_029398, intron 4 of 4)	10165	NM_029398	75712	Mm.441478	NM_029398	ENSMUSG00000025933	Tmem14a	5730496E24Rik|C85783|PTD011	transmembrane protein 14A	protein-coding
common_peak2-21635-15-15-0.0121647505556561-0.30803596071496	chr11	101278220	101278858	+	0	NA	exon (NM_144829, exon 2 of 12)	exon (NM_144829, exon 2 of 12)	208	NM_144829	69684	Mm.146283	NM_144829	ENSMUSG00000075528	Aarsd1	1110069E20Rik|2310044P18Rik|AA589600|AlaX|AlaXp-II	alanyl-tRNA synthetase domain containing 1	protein-coding
common_peak2-22105-19-34--0.72659569028328-0.974620203848502	chr12	80318654	80319274	+	0	NA	intron (NM_030017, intron 5 of 6)	Lx5|LINE|L1	9063	NM_030017	77974	Mm.274373	NM_030017	ENSMUSG00000021123	Rdh12	A930033N07Rik	retinol dehydrogenase 12	protein-coding
unique_peak1-4992-6-1-1.5653981103803-1.56314192529759	chr4	116655931	116656456	+	0	NA	intron (NM_001029912, intron 11 of 13)	B2_Mm2|SINE|B2	10787	NM_009478	22275	Mm.46484	NM_009478	ENSMUSG00000028684	Urod	AI323803|Uro-d	uroporphyrinogen decarboxylase	protein-coding
unique_peak2-37756-5-8--0.874305337448166-1.10484139239135	chr5	113220596	113221142	+	0	NA	intron (NM_028901, intron 29 of 43)	intron (NM_028901, intron 29 of 43)	-1443	NR_040675	67360	Mm.59218	NR_040675	ENSMUSG00000098230	1700095B10Rik	-	RIKEN cDNA 1700095B10 gene	ncRNA
common_peak2-25024-93-127-0.111069863506269-0.400208738142035	chr18	24205081	24206683	+	0	NA	Intergenic	Intergenic	-26610	NM_021559	59057	Mm.417427	NM_021559		Zfp191	3526401F17Rik|5033419P20Rik|AI480505|AI642085|AL024422|KOX17|ZF-12|Znf191|Znf24|Znp191	zinc finger protein 191	protein-coding
unique_peak2-37048-6-9--0.75652998450706-1.11707584880836	chr3	135437488	135438047	+	0	NA	Intergenic	MMETn-int|LTR|ERVK	-50476	NM_026228	67547	Mm.30239	NM_026228	ENSMUSG00000053897	Slc39a8	4933419D20Rik|AA986696|BIGM103|ZIP-8|Zip8	solute carrier family 39 (metal ion transporter), member 8	protein-coding
common_peak1-18179-8-10--0.454209200689727-1.078512453669	chr8	14964994	14965483	+	0	NA	intron (NM_172751, intron 18 of 28)	intron (NM_172751, intron 18 of 28)	-45787	NM_029116	74901	Mm.46675	NM_029116	ENSMUSG00000055675	Kbtbd11	2900016B01Rik|4930465M17Rik|mKIAA0711	kelch repeat and BTB (POZ) domain containing 11	protein-coding
common_peak2-23902-7-5-0.214128329577033-1.01466476204226	chr16	4604407	4604754	+	0	NA	intron (NM_031184, intron 1 of 6)	intron (NM_031184, intron 1 of 6)	9867	NM_031184	83396	Mm.134072	NM_031184	ENSMUSG00000014303	Glis2	Gli5|Klf16|Nkl	GLIS family zinc finger 2	protein-coding
unique_peak1-5855-9-2-1.60465090568306-1.87199725847353	chr6	83417362	83417875	+	0	NA	Intergenic	Intergenic	25869	NR_028382	320775	Mm.434334	NR_028382	ENSMUSG00000051844	B230319C09Rik	-	RIKEN cDNA B230319C09 gene	ncRNA
unique_peak2-36894-8-14--0.901668177660948-0.660903317613906	chr3	95754108	95754841	+	0	NA	Intergenic	L1_Mus1|LINE|L1	21294	NM_023210	66471	Mm.218657	NM_023210	ENSMUSG00000015749	Anp32e	2810018A15Rik|AI047746|AI326868|CPD1|LANP-L|LANPL|mLANP-L	acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	protein-coding
common_peak2-26383-7-5-0.214128329577033-1.01466476204226	chr2	49687974	49688351	+	0	NA	intron (NM_027990, intron 1 of 9)	MT2A|LTR|ERVL	44956	NM_027990	71897	Mm.41381	NM_027990	ENSMUSG00000026765	Lypd6b	2310010M24Rik|AW049525	LY6/PLAUR domain containing 6B	protein-coding
common_peak1-12169-43-44-0.290710089194028-0.566980988816338	chr17	29488662	29490395	+	0	NA	Intergenic	ORR1C2|LTR|MaLR	-4679	NM_019880	56462	Mm.285322	NM_019880	ENSMUSG00000024012	Mtch1	2310034O17Rik|AI255158|AU018396|C77849|PSAP	mitochondrial carrier homolog 1 (C. elegans)	protein-coding
common_peak1-18006-33-80--1.0085124403591-3.25247856210074	chr7	140941313	140942507	+	0	NA	intron (NM_001286032, intron 1 of 10)	intron (NM_001286032, intron 1 of 10)	10042	NM_001286030	101437	Mm.199223	NM_133941	ENSMUSG00000030986	Dhx32	3110079L04Rik|4732469F02Rik|AA408140|Ddx32	DEAH (Asp-Glu-Ala-His) box polypeptide 32	protein-coding
common_peak1-17005-22-38--0.638118113774844-0.887741995158868	chr6	89361401	89362708	+	0	NA	intron (NM_001167736, intron 5 of 6)	HAL1-3A_ME|LINE|L1	-49447	NM_008881	18844	Mm.3789	NM_008881	ENSMUSG00000030084	Plxna1	2600013D04Rik|NOV|PlexA1|Plxn1|mKIAA4053	plexin A1	protein-coding
common_peak1-18704-61-57-0.524768334621768-1.35565283421421	chr8	121949974	121951617	+	0	NA	Intergenic	Intergenic	-10267	NM_027950	71839	Mm.272357	NM_027950	ENSMUSG00000074063	Osgin1	1700012B18Rik|Okl38	oxidative stress induced growth inhibitor 1	protein-coding
unique_peak2-38255-2-7--1.91745425626332-1.45399745587252	chr6	125164348	125164763	+	0	NA	Intergenic	Intergenic	-1044	NM_009496	22317	Mm.32321	NM_009496	ENSMUSG00000030337	Vamp1	Syb-1|Syb1|VAMP-1|lew	vesicle-associated membrane protein 1	protein-coding
unique_peak2-38601-7-7--0.200909169701811-0.97990265578305	chr7	79303260	79303637	+	0	NA	intron (NM_001024703, intron 17 of 22)	intron (NM_001024703, intron 17 of 22)	148033	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding
common_peak2-23104-8-11--0.579740082773585-1.14218153353838	chr14	78331205	78331720	+	0	NA	intron (NM_178825, intron 4 of 6)	intron (NM_178825, intron 4 of 6)	27416	NM_029495	108670	Mm.68134	NM_029495	ENSMUSG00000022014	Epsti1	2310046K10Rik|5033415K03Rik|BRESI1	epithelial stromal interaction 1 (breast)	protein-coding
unique_peak1-1424-12-0-3.64877598508764-4.21441993929574	chr12	83620556	83621185	+	0	NA	Intergenic	Intergenic	-97155	NM_015812	50779	Mm.153013	NM_015812	ENSMUSG00000021219	Rgs6	-	regulator of G-protein signaling 6	protein-coding
common_peak1-18081-11-11--0.0762689164695427-0.301029995663976	chr8	70696681	70697455	+	0	NA	Intergenic	B3|SINE|B2	-103359	NM_028182	72281	Mm.40974	NM_028182	ENSMUSG00000053886	Sh2d4a	2210402M20Rik|SH2A	SH2 domain containing 4A	protein-coding
common_peak2-27624-7-15--1.20090916970181-0.947446088118041	chr3	105058539	105059118	+	0	NA	Intergenic	Intergenic	189066	NM_029228	75269	Mm.307994	NM_029228	ENSMUSG00000051788	4930564D02Rik	-	RIKEN cDNA 4930564D02 gene	protein-coding
common_peak2-19672-32-59--0.627798576388859-1.19360251378961	chr1	55087251	55088886	+	0	NA	Intergenic	Intergenic	-3746	NM_031179	81898	Mm.279736	NM_031179	ENSMUSG00000025982	Sf3b1	155kDa|2810001M05Rik|AA409119|Prp10|SAP155|SF3b155|TA-8|Targ4	splicing factor 3b, subunit 1	protein-coding
common_peak1-9146-26-17-0.75797409071615-1.09210977391291	chr11	76406699	76407884	+	0	NA	Intergenic	Intergenic	-16050	NM_198894	109934	Mm.258939	NM_198018	ENSMUSG00000017631	Abr	-	active BCR-related gene	protein-coding
unique_peak2-38021-4-9--1.34538860874061-1.36011389749466	chr6	34384225	34384715	+	0	NA	Intergenic	L1_Mm|LINE|L1	22108	NM_009731	11997	Mm.482073	NM_009731	ENSMUSG00000052131	Akr1b7	AR|Avdp|MVDP	aldo-keto reductase family 1, member B7	protein-coding
unique_peak1-6008-13-1-2.77847203063777-3.64038867156802	chr6	107567069	107567685	+	0	NA	Intergenic	L1VL1|LINE|L1	87657	NM_008516	16979	Mm.428543	NM_008516	ENSMUSG00000034648	Lrrn1	2810047E21Rik|NLRR-1	leucine rich repeat protein 1, neuronal	protein-coding
common_peak1-9940-19-16-0.315224485411347-0.448200956659575	chr12	108792133	108792793	+	0	NA	Intergenic	Intergenic	181235	NR_045973	74968	Mm.359821	NR_045973	ENSMUSG00000085641	4930465M20Rik	4930431H15Rik	RIKEN cDNA 4930465M20 gene	ncRNA
common_peak1-7488-16-14-0.211373046659543-0.364171515310935	chr1	9236601	9237440	+	0	NA	intron (NM_027671, intron 1 of 20)	L1Md_T|LINE|L1	52938	NM_001290390	71096	Mm.336395	NM_027671		Sntg1	4933426D16Rik|G1SYN|SYN4	syntrophin, gamma 1	protein-coding
unique_peak1-3536-10-2-1.77145284428761-2.09384600808989	chr19	21170656	21171201	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-142236	NM_028953	13409	Mm.219585	NM_028953	ENSMUSG00000024749	Tmc1	4933416G09Rik|Beethoven|Bth|CWEA1|dn	transmembrane channel-like gene family 1	protein-coding
unique_peak1-5729-8-3-1.00522241794757-1.39487600375387	chr6	43305524	43306043	+	0	NA	intron (NM_013861, intron 8 of 8)	intron (NM_013861, intron 8 of 8)	-46230	NM_130869	18291	Mm.17715	NM_130869	ENSMUSG00000029736	Nobox	OG2|Og2x	NOBOX oogenesis homeobox	protein-coding
common_peak2-26373-13-8-0.608547029195456-0.660903317613904	chr2	44526166	44526599	+	0	NA	intron (NM_172662, intron 5 of 10)	L1Md_F|LINE|L1	190760	NM_172662	227835	Mm.314312	NM_172662	ENSMUSG00000036890	Gtdc1	E330008O22Rik	glycosyltransferase-like domain containing 1	protein-coding
common_peak1-19000-11-11--0.0762689164695427-0.301029995663976	chr9	59652971	59653539	+	0	NA	intron (NM_173018, intron 8 of 43)	B1_Mur2|SINE|Alu	54274	NM_173018	270163	Mm.249545	NM_173018	ENSMUSG00000039585	Myo9a	4732465J09Rik|C130068I12Rik|C230003M11	myosin IXa	protein-coding
unique_peak1-5809-17-0-4.21829633820504-6.02059991327962	chr6	67283861	67284388	+	0	NA	intron (NM_008354, intron 8 of 15)	intron (NM_008354, intron 8 of 15)	42007	NM_008354	16162	Mm.188337	NM_008354	ENSMUSG00000018341	Il12rb2	A930027I18Rik|IL-12RB2|Ifnm	interleukin 12 receptor, beta 2	protein-coding
common_peak2-19601-8-8--0.164702583494742-1.00793137938329	chr1	33670267	33670710	+	0	NA	intron (NM_008922, intron 7 of 13)	intron (NM_008922, intron 7 of 13)	56151	NM_008922	19076	Mm.27705	NM_008922	ENSMUSG00000026134	Prim2	AI323589	DNA primase, p58 subunit	protein-coding
common_peak1-9513-54-38-0.887683542767485-2.62085056578726	chr11	115072666	115074316	+	0	NA	intron (NM_001033393, intron 8 of 9)	intron (NM_001033393, intron 8 of 9)	24690	NM_001033393	320534	Mm.260587	NM_001033393	ENSMUSG00000045980	Tmem104	C630005D06Rik|mFLJ00021	transmembrane protein 104	protein-coding
unique_peak1-208-15-2-2.4272022498345-3.53487848679804	chr1	86447992	86448680	+	0	NA	Intergenic	Intergenic	1047049	NM_030194	109032	Mm.335802	NM_030194	ENSMUSG00000070034	Sp110	5031415C07Rik|52kDa|5830484A20Rik|ENSMUSG00000075603|Ifi75|Ipr1	Sp110 nuclear body protein	protein-coding
common_peak1-18103-16-12-0.417823924126969-0.489164546851866	chr8	3220958	3221900	+	0	NA	intron (NM_010568, intron 2 of 20)	intron (NM_010568, intron 2 of 20)	58188	NM_010568	16337	Mm.268003	NM_010568	ENSMUSG00000005534	Insr	4932439J01Rik|CD220|D630014A15Rik|IR|IR-A|IR-B	insulin receptor	protein-coding
common_peak2-22881-7-5-0.214128329577033-1.01466476204226	chr14	31407573	31407978	+	0	NA	TTS (NM_011103)	TTS (NM_011103)	22440	NR_037237	100526475		NR_037237		Mir3076	mmu-mir-3076	microRNA 3076	ncRNA
common_peak1-10780-23-24-0.0779113147343562-0.318406410381916	chr14	73524690	73525442	+	0	NA	Intergenic	Intergenic	-17251	NM_001170694	105670	Mm.280068	NM_134083	ENSMUSG00000022106	Rcbtb2	2610028E02Rik|2810420M18Rik|AI448345|AW240694|Chc1l|RC/BTB2	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2	protein-coding
unique_peak1-5888-12-2-2.06381348436648-2.79529063155376	chr6	86765496	86766049	+	0	NA	Intergenic	Intergenic	-22194	NM_013471	11746	Mm.259702	NM_013471	ENSMUSG00000029994	Anxa4	AI265406|AIV|AW106930|Anx4|Xanx-4	annexin A4	protein-coding
unique_peak1-6091-10-2-1.77145284428761-2.09384600808989	chr6	124800388	124800916	+	0	NA	exon (NM_013534, exon 9 of 15)	exon (NM_013534, exon 9 of 15)	7053	NM_013534	14789	Mm.35708	NM_013534	ENSMUSG00000023191	Leprel2	BC016431|Grcb|P3h3	leprecan-like 2	protein-coding
common_peak1-13636-12-18--0.599151528355947-0.476916024233333	chr2	25534410	25535106	+	0	NA	intron (NM_177840, intron 2 of 6)	B3|SINE|B2	2452	NM_001276448	620709	Mm.99499	NM_177840	ENSMUSG00000045684	Lcn6	9230101D24Rik	lipocalin 6	protein-coding
unique_peak1-191-7-3-0.799090830298189-1.23214870625617	chr1	77516476	77516937	+	0	NA	Intergenic	Intergenic	-5043	NM_007936	13838	Mm.400747	NM_007936	ENSMUSG00000026235	Epha4	2900005C20Rik|AI385584|Cek8|Hek8|Sek|Sek1|Tyro1|rb	Eph receptor A4	protein-coding
unique_peak1-7136-8-3-1.00522241794757-1.39487600375387	chr9	55125665	55126237	+	0	NA	intron (NM_032002, intron 3 of 7)	L1M5|LINE|L1	5481	NM_032002	83961	Mm.443874	NM_032002	ENSMUSG00000032311	Nrg4	AI552600	neuregulin 4	protein-coding
common_peak2-25549-35-41-0.0390528356837434-0.311371317671728	chr19	6135699	6137427	+	0	NA	intron (NM_019722, intron 3 of 4)	intron (NM_019722, intron 3 of 4)	4574	NM_019722	56327	Mm.21071	NM_019722		Arl2	2610009M23Rik|AI115441|AW553335	ADP-ribosylation factor-like 2	protein-coding
common_peak1-16490-30-19-0.84774731460451-1.46094028072561	chr5	138263146	138264209	+	0	NA	exon (NM_001005426, exon 17 of 17)	exon (NM_001005426, exon 17 of 17)	13829	NM_153510	231805	Mm.379385	NM_153510	ENSMUSG00000046245	Pilra	AV021745|FDF03	paired immunoglobin-like type 2 receptor alpha	protein-coding
common_peak2-29177-16-9-0.796335547380699-0.844317084070804	chr5	134951140	134951711	+	0	NA	Intergenic	PB1D9|SINE|Alu	-18839	NM_001081464	57080	Mm.332735	NM_020331	ENSMUSG00000023079	Gtf2ird1	1700012P16Rik|BEN|Cream1|ESTM9|GTF3|Gtf2il|MusTRD1|Tg(Alb1-Myc)166.8Sst|WBSCR11|X83320	general transcription factor II I repeat domain-containing 1	protein-coding
unique_peak2-39494-7-10--0.660340788339108-1.12966497611638	chr9	59539654	59540180	+	0	NA	Intergenic	Intergenic	-15654	NM_001033498	546134	Mm.297580	NM_001033498	ENSMUSG00000074259	Gramd2	BC064463	GRAM domain containing 2	protein-coding
common_peak1-8233-20-46--1.06651406708644-2.18062287223157	chr10	13192442	13193344	+	0	NA	intron (NM_001195065, intron 1 of 12)	GC_rich|Low_complexity|Low_complexity	1309	NM_001195065	215789	Mm.283359	NM_001033257	ENSMUSG00000062866	Phactr2	AV158170|BC012871	phosphatase and actin regulator 2	protein-coding
unique_peak2-36424-1-6--2.43441193227435-1.56314192529759	chr2	128943541	128943904	+	0	NA	exon (NM_009086, exon 11 of 15)	exon (NM_009086, exon 11 of 15)	-11714	NM_025395	66170	Mm.40621	NM_025395	ENSMUSG00000037938	Chchd5	1110027L01Rik|AW045710	coiled-coil-helix-coiled-coil-helix domain containing 5	protein-coding
unique_peak2-33318-11-36--1.70075978137734-3.34305003325519	chr11	8920844	8921884	+	0	NA	intron (NM_001290519, intron 8 of 9)	RLTR20B1|LTR|ERVK	-10224	NM_008316	15574	Mm.42201	NM_008316	ENSMUSG00000020413	Hus1	mHus1	Hus1 homolog (S. pombe)	protein-coding
common_peak2-28512-12-8-0.478850983645327-0.562038191119709	chr5	74284967	74285408	+	0	NA	Intergenic	Intergenic	179249	NM_177561	69727	Mm.48795	NM_177561		Usp46	1190009E20Rik|2410018I08Rik|AI451644	ubiquitin specific peptidase 46	protein-coding
unique_peak2-33125-0-9--4.16205902536157-2.31132995230379	chr10	81495444	81495885	+	0	NA	Intergenic	BGLII_B|LTR|ERVK	-15208	NM_001024626	408062	Mm.391409	NM_001024626		Zfp873	-	zinc finger protein 873	protein-coding
unique_peak2-36000-10-6-0.549060422951165-1.21398586181642	chr19	37959312	37959592	+	0	NA	Intergenic	Intergenic	158615	NM_001099634	226101	Mm.34674	NM_177035	ENSMUSG00000048612	Myof	2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3	myoferlin	protein-coding
common_peak2-29233-14-14--0.00767443525087419-0.308519316180257	chr5	138622814	138623435	+	0	NA	intron (NM_009315, intron 10 of 14)	intron (NM_009315, intron 10 of 14)	5290	NM_009315	21343	Mm.248517	NM_009315	ENSMUSG00000036980	Taf6	80kDa|AW549759|TAF(II)80|TAFII70|Taf2e|p80	TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor	protein-coding
common_peak1-11500-8-8--0.164702583494742-1.00793137938329	chr15	103221190	103221645	+	0	NA	Intergenic	B3|SINE|B2	-24238	NM_010577	16402	Mm.16234	NM_010577	ENSMUSG00000000555	Itga5	Cd49e|Fnra|VLA5	integrin alpha 5 (fibronectin receptor alpha)	protein-coding
common_peak1-8721-45-45-0.336796069287859-0.658272150962117	chr11	106216197	106217607	+	0	NA	Intergenic	L2a|LINE|L2	-6198	NM_133199	110880	Mm.432528	NM_133199	ENSMUSG00000001027	Scn4a	Nav1.4|SkM1|mH2	sodium channel, voltage-gated, type IV, alpha	protein-coding
common_peak1-13061-10-28--1.5015656501188-2.22881803703862	chr19	6127767	6128281	+	0	NA	intron (NM_026912, intron 1 of 7)	intron (NM_026912, intron 1 of 7)	191	NM_026912	69024	Mm.329629	NM_026912	ENSMUSG00000024787	Snx15	1500032B08Rik|E130013C21Rik	sorting nexin 15	protein-coding
unique_peak2-39507-8-13--0.802132504110034-0.562038191119711	chr9	63398646	63399317	+	0	NA	intron (NM_030068, intron 5 of 21)	intron (NM_030068, intron 5 of 21)	51274	NM_030068	78250	Mm.444612	NM_030068	ENSMUSG00000037801	Iqch	4921504K03Rik	IQ motif containing H	protein-coding
common_peak2-21717-12-19--0.673152109799724-0.546772548767014	chr11	109610855	109611559	+	0	NA	Intergenic	MER2|DNA|MER2_type	-27637	NM_153782	208659	Mm.208662	NM_153782	ENSMUSG00000020614	Fam20a	AI606893	family with sequence similarity 20, member A	protein-coding
unique_peak2-35539-6-10--0.894033508256995-1.21398586181642	chr17	56664411	56664997	+	0	NA	Intergenic	Intergenic	-12798	NM_011483	20834	Mm.76862	NM_011483	ENSMUSG00000044526	Znrf4	1700094M01Rik|Ssrzf1|spzn	zinc and ring finger 4	protein-coding
unique_peak1-710-10-1-2.35641534500877-2.57096726280955	chr10	86183067	86183504	+	0	NA	intron (NM_001003910, intron 3 of 15)	intron (NM_001003910, intron 3 of 15)	7775	NM_153595	103220	Mm.440762	NM_153595	ENSMUSG00000044937	BC030307	AI449705|AU041509|Gnn	cDNA sequence BC030307	protein-coding
common_peak2-21565-30-55--0.637679512565731-1.16883084967252	chr11	97361851	97363248	+	0	NA	promoter-TSS (NM_001289118)	promoter-TSS (NM_001289118)	-895	NM_001289118	100141474	Mm.482426	NM_001289118		4933428G20Rik	-	RIKEN cDNA 4933428G20 gene	protein-coding
unique_peak1-1522-16-9-0.796335547380699-0.844317084070804	chr13	12638085	12638975	+	0	NA	Intergenic	B4A|SINE|B4	-19620	NM_026184	67475	Mm.358706	NM_026184	ENSMUSG00000057069	Ero1lb	1300013B24Rik|1700065B09Rik|AI447560|ero1-beta	ERO1-like beta (S. cerevisiae)	protein-coding
common_peak1-8940-6-6--0.241956811677302-0.947717972411649	chr11	53567243	53567750	+	0	NA	Intergenic	URR1A|DNA|MER1_type	9660	NR_106131	102465772		NR_106131	miRBase:MI0025011	Mir7671	mmu-mir-7671	microRNA mir-7671	ncRNA
unique_peak2-34703-11-11--0.0762689164695427-0.301029995663976	chr15	27998757	27999474	+	0	NA	Intergenic	ORR1A3|LTR|MaLR	-43512	NM_001081302	223435	Mm.485422	NM_001081302	ENSMUSG00000022263	Trio	6720464I07Rik|AA408740|Solo	triple functional domain (PTPRF interacting)	protein-coding
unique_peak1-3535-15-6-1.20480982849805-1.32521814697968	chr19	21144555	21145185	+	0	NA	Intergenic	MTEa|LTR|MaLR	-116178	NM_028953	13409	Mm.219585	NM_028953	ENSMUSG00000024749	Tmc1	4933416G09Rik|Beethoven|Bth|CWEA1|dn	transmembrane channel-like gene family 1	protein-coding
common_peak2-31059-357-511-0.451364733193888-6.73250537732706	chr8	20296029	20298095	+	0	NA	Intergenic	Intergenic	-276670	NR_028428	381598	Mm.359054	NM_001024708	ENSMUSG00000071793	2610005L07Rik	2810038F24Rik|6720476A01Rik	cadherin 11 pseudogene	pseudo
unique_peak2-39485-3-11--1.99894559068043-1.95434855131066	chr9	58253250	58253676	+	0	NA	Intergenic	Intergenic	35152	NR_040727	73529	Mm.490924	NR_040727		1700072B07Rik	-	RIKEN cDNA 1700072B07 gene	ncRNA
common_peak2-31051-12-11-0.0638134843664826-0.337263207250336	chr8	18767753	18768284	+	0	NA	intron (NM_173189, intron 12 of 13)	intron (NM_173189, intron 12 of 13)	-26456	NM_007426	11601	Mm.439874	NM_007426	ENSMUSG00000031465	Angpt2	Agpt2|Ang-2|Ang2	angiopoietin 2	protein-coding
common_peak2-26905-9-8-0.0196884049619079-1.03275496310833	chr2	158794876	158795321	+	0	NA	Intergenic	Intergenic	174555	NM_001291144	71715	Mm.315652	NM_145742	ENSMUSG00000027655	Dhx35	1200009D07Rik|Ddx35	DEAH (Asp-Glu-Ala-His) box polypeptide 35	protein-coding
common_peak2-31986-9-17--0.980311595038092-0.844317084070804	chr9	70229385	70230128	+	0	NA	intron (NM_181072, intron 25 of 27)	Charlie10|DNA|MER1_type	23804	NR_049200	100885839		NR_049200	miRBase:MI0019195	Mir5626	mmu-mir-5626	microRNA mir-5626	ncRNA
common_peak2-19617-36-43-0.0198894675304571-0.310901174692144	chr1	36368347	36369160	+	0	NA	exon (NM_001290726, exon 2 of 8)	exon (NM_001290726, exon 2 of 8)	4175	NM_001172205	214855	Mm.34316	NM_145996	ENSMUSG00000037447	Arid5a	D430024K22Rik|Mrf1	AT rich interactive domain 5A (MRF1-like)	protein-coding
common_peak2-20651-14-38--1.3861860585046-2.54214423428716	chr10	81704505	81705279	+	0	NA	promoter-TSS (NM_001105557)	promoter-TSS (NM_001105557)	-872	NM_001105557	237411		NM_172789	ENSMUSG00000062931	Zfp938	B230315N10Rik	zinc finger protein 938	protein-coding
unique_peak1-4077-17-12-0.517856620063946-0.647240723060192	chr2	69379228	69380237	+	0	NA	intron (NM_001081088, intron 4 of 78)	B1_Mur1|SINE|Alu	44392	NM_001081088	14725	Mm.23847	NM_001081088	ENSMUSG00000027070	Lrp2	AI315343|AW536255|D230004K18Rik|Gp330|Megalin|b2b1625.2Clo	low density lipoprotein receptor-related protein 2	protein-coding
common_peak2-26740-15-24--0.631691439219068-0.650819692678081	chr2	132144546	132145441	+	0	NA	Intergenic	L1Md_F2|LINE|L1	33318	NM_001291039	110911	Mm.284503	NM_138651	ENSMUSG00000058793	Cds2	5730450N06Rik|5730460C18Rik|AI854580|D2Wsu127e	CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2	protein-coding
common_peak2-25000-19-19-0.0807592317743238-0.322753776620787	chr18	11910154	11910687	+	0	NA	Intergenic	MMERVK10C-int|LTR|ERVK	-87363	NM_022021	63955	Mm.40717	NM_022021	ENSMUSG00000040957	Cables1	Cables|ik3-1	CDK5 and Abl enzyme substrate 1	protein-coding
unique_peak1-4133-10-5-0.771452844287613-1.33892459842472	chr2	92202217	92202713	+	0	NA	3' UTR (NM_001109691, exon 19 of 19)	3' UTR (NM_001109691, exon 19 of 19)	8749	NM_001290774	228366	Mm.31158	NM_172670	ENSMUSG00000040434	Gyltl1b	5730485C17Rik|AI891893|Large2|Largel|mKIAA4105	glycosyltransferase-like 1B	protein-coding
unique_peak1-340-12-7-0.648775985087639-0.697979855752659	chr1	134494529	134495228	+	0	NA	intron (NM_001160316, intron 20 of 26)	intron (NM_001160316, intron 20 of 26)	44557	NM_001160316	269116	Mm.326702	NM_182716	ENSMUSG00000026442	Nfasc	AA387016|D430023G06Rik|NF|mKIAA0756	neurofascin	protein-coding
unique_peak1-4364-10-0-3.35641534500877-3.31132995230379	chr2	156736064	156736580	+	0	NA	Intergenic	Intergenic	-23508	NM_029983	77799	Mm.29264	NM_029983	ENSMUSG00000027636	Sla2	A930009E21Rik|AI430952|SLAP-2|SLAP2	Src-like-adaptor 2	protein-coding
common_peak2-25391-32-24-0.635235829444936-1.08405458203115	chr19	3325652	3326413	+	0	NA	intron (NM_013495, intron 1 of 18)	intron (NM_013495, intron 1 of 18)	2731	NM_013495	12894	Mm.18522	NM_013495	ENSMUSG00000024900	Cpt1a	C730027G07|CPTI|Cpt1	carnitine palmitoyltransferase 1a, liver	protein-coding
unique_peak2-37277-7-15--1.20090916970181-0.947446088118041	chr4	115737677	115738134	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	9770	NM_025641	66576	Mm.181721	NM_025641	ENSMUSG00000063882	Uqcrh	2210416J04Rik|2310021J10Rik|2610041P16Rik	ubiquinol-cytochrome c reductase hinge protein	protein-coding
unique_peak1-6018-15-4-1.69023665566829-1.97518968347063	chr6	110145961	110146660	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-449282	NM_177328	108073	Mm.240881	NM_177328	ENSMUSG00000056755	Grm7	6330570A01Rik|BB176677|C030018L03|E130018M02Rik|Gpr1g|Gprc1g|mGluR7	glutamate receptor, metabotropic 7	protein-coding
common_peak2-31567-110-156-0.107377011487017-0.41397669133061	chr8	118285643	118288532	+	0	NA	Intergenic	Intergenic	-56293	NM_001025577	17132	Mm.275549	NM_001025577		Maf	2810401A20Rik|A230108G15Rik|AW047063|c-maf	avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog	protein-coding
unique_peak1-6880-16-4-1.7963355473807-2.18192634393779	chr8	91506169	91506989	+	0	NA	Intergenic	Intergenic	-42055	NR_106190	102465899		NR_106190	miRBase:MI0026042	Mir8110	mmu-mir-8110	microRNA mir-8110	ncRNA
unique_peak2-33812-11-27--1.29866133780599-1.81053432848961	chr11	121702446	121703390	+	0	NA	exon (NM_029049, exon 4 of 4)	exon (NM_029049, exon 4 of 4)	11386	NM_029049	74675	Mm.61213	NM_029049	ENSMUSG00000039198	Ptchd3	4930451E13Rik|4933440L20Rik|RNDEu-3	patched domain containing 3	protein-coding
unique_peak1-3036-10-2-1.77145284428761-2.09384600808989	chr18	76103676	76104246	+	0	NA	intron (NM_145356, intron 2 of 4)	intron (NM_145356, intron 2 of 4)	124129	NM_145356	207259	Mm.159332	NM_145356	ENSMUSG00000044646	Zbtb7c	B230208J24Rik|Kr-pok|Zbtb36	zinc finger and BTB domain containing 7C	protein-coding
unique_peak2-32977-2-13--2.72480917832092-2.79529063155376	chr10	58321870	58322290	+	0	NA	intron (NM_172788, intron 1 of 9)	Lx8|LINE|L1	45973	NM_172788	237353	Mm.333078	NM_172788	ENSMUSG00000037990	Sh3rf3	4831416G18Rik|Igfbp5-ip|Sh3md4|Sh3rf31	SH3 domain containing ring finger 3	protein-coding
unique_peak2-35665-1-7--2.62705701021674-1.80617997398389	chr18	8327468	8327690	+	0	NA	Intergenic	RMER17B|LTR|ERVK	458384	NM_153085	225131	Mm.204524	NM_153085	ENSMUSG00000024283	Wac	1110067P07Rik|A230035H12Rik|AI256735|AI256776|Wwp4	WW domain containing adaptor with coiled-coil	protein-coding
unique_peak2-38822-4-7--1.02346051385325-1.09384600808989	chr7	140882418	140882754	+	0	NA	intron (NM_009479, intron 7 of 9)	intron (NM_009479, intron 7 of 9)	-10842	NM_152944	214766	Mm.222952	NM_152944	ENSMUSG00000030981	Mmp21	b2b873Clo	matrix metallopeptidase 21	protein-coding
unique_peak2-33354-2-7--1.91745425626332-1.45399745587252	chr11	31226004	31226289	+	0	NA	Intergenic	Intergenic	43915	NM_011491	20856	Mm.32506	NM_011491		Stc2	AW125853|Stc2l|mustc2	stanniocalcin 2	protein-coding
unique_peak2-37319-2-6--1.72480917832092-1.26211192963361	chr4	126169801	126170084	+	0	NA	3' UTR (NM_153177, exon 18 of 18)	3' UTR (NM_153177, exon 18 of 18)	-24277	NM_153403	236511	Mm.30800	NM_153403	ENSMUSG00000041530	Ago1	Eif2c1	argonaute RISC catalytic subunit 1	protein-coding
common_peak1-12590-61-85--0.0435154249527576-0.306200290196897	chr18	23953746	23955315	+	0	NA	intron (NM_001162941, intron 2 of 7)	L2a|LINE|L2	-7941	NM_153058	212307	Mm.132237	NM_153058	ENSMUSG00000024277	Mapre2	AI314113|C820009F03Rik|D18Abb1e|EB1|EB2|RP1	microtubule-associated protein, RP/EB family, member 2	protein-coding
common_peak2-32021-29-26-0.357402578451643-0.590428395010953	chr9	75422680	75423745	+	0	NA	intron (NM_001038710, intron 9 of 9)	PB1D10|SINE|Alu	-15748	NM_016963	50875	Mm.38445	NM_016963	ENSMUSG00000058587	Tmod3	U-Tmod|UTMOD	tropomodulin 3	protein-coding
common_peak2-20056-15-18--0.235762762887929-0.326591483156968	chr1	151344649	151345469	+	0	NA	Intergenic	L1Md_T|LINE|L1	463355	NM_008869	18783	Mm.4186	NM_008869	ENSMUSG00000056220	Pla2g4a	Pla2g4|cPLA2|cPLA2alpha	phospholipase A2, group IVA (cytosolic, calcium-dependent)	protein-coding
common_peak1-9531-12-16--0.4386868561627-0.368541233333383	chr11	116012175	116012740	+	0	NA	intron (NM_172571, intron 16 of 30)	intron (NM_172571, intron 16 of 30)	-12275	NM_024177	60441	Mm.29974	NM_024177	ENSMUSG00000020775	Mrpl38	1110036N21Rik|4733401F03Rik|MRP-L3|R75240|Rpml3	mitochondrial ribosomal protein L38	protein-coding
common_peak1-16044-29-27-0.304935158557507-0.525808162491371	chr5	38038915	38040085	+	0	NA	intron (NM_022416, intron 2 of 11)	intron (NM_022416, intron 2 of 11)	68892	NM_022416	64293	Mm.103714	NM_022416	ENSMUSG00000029123	Stk32b	2510009F08Rik|STKG6|Stk32|YANK2	serine/threonine kinase 32B	protein-coding
common_peak1-16124-10-3-1.35641534500877-1.75805390616669	chr5	66617817	66618341	+	0	NA	Intergenic	Intergenic	-33285	NM_027602	70918	Mm.23166	NM_027602	ENSMUSG00000029206	Nsun7	4921525L17Rik	NOL1/NOP2/Sun domain family, member 7	protein-coding
unique_peak1-460-10-3-1.35641534500877-1.75805390616669	chr1	170831244	170831756	+	0	NA	Intergenic	Lx8|LINE|L1	410726	NR_105766	102465178		NR_105766	miRBase:MI0021876	Mir6348	mmu-mir-6348	microRNA mir-6348	ncRNA
unique_peak1-5119-10-3-1.35641534500877-1.75805390616669	chr5	32210678	32211273	+	0	NA	intron (NM_181281, intron 6 of 10)	intron (NM_181281, intron 6 of 10)	210552	NM_181282	107976	Mm.482126	NM_144541	ENSMUSG00000052139	Bre	6030405P19Rik|AI429776|B830038C02Rik	brain and reproductive organ-expressed protein	protein-coding
common_peak2-25249-16-24--0.525592547506663-0.561823156887258	chr18	65070375	65071273	+	0	NA	intron (NM_001114386, intron 1 of 30)	intron (NM_001114386, intron 1 of 30)	23414	NM_001114386	83814	Mm.98668	NM_031881	ENSMUSG00000024589	Nedd4l	1300012C07Rik|Nedd4-2|Nedd4b	neural precursor cell expressed, developmentally down-regulated gene 4-like	protein-coding
common_peak1-19405-20-37--0.759852728852392-1.13829382151971	chrX	71816337	71817488	+	0	NA	Intergenic	Intergenic	-22755	NM_146398	258393	Mm.377477	NM_146398	ENSMUSG00000051706	Olfr1325	MOR102-1	olfactory receptor 1325	protein-coding
unique_peak1-5509-9-0-3.18961340640422-3.01029995663981	chr5	136532010	136532648	+	0	NA	promoter-TSS (NM_027158)	promoter-TSS (NM_027158)	-808	NM_027158	69665	Mm.75713	NM_027158	ENSMUSG00000006143	Upk3bl	2310043J07Rik	uroplakin 3B-like	protein-coding
common_peak1-8281-16-15-0.118263642268062-0.328191099940264	chr10	26013077	26013756	+	0	NA	intron (NM_172787, intron 17 of 21)	intron (NM_172787, intron 17 of 21)	63903	NM_001115154	268288	Mm.213322	NM_001013766	ENSMUSG00000051354	Samd3	Gm623	sterile alpha motif domain containing 3	protein-coding
common_peak1-12175-18-22--0.210642804828661-0.321718508207525	chr17	30612080	30612757	+	0	NA	intron (NM_172618, intron 6 of 11)	intron (NM_172618, intron 6 of 11)	-79293	NR_030688	623169	Mm.440508	NR_030688		Gm6402	EG623169	ribosomal protein S17 pseudogene	pseudo
common_peak1-7673-13-13--0.0288828914198356-0.309074325783021	chr1	75520926	75521678	+	0	NA	exon (NM_027886, exon 3 of 25)	exon (NM_027886, exon 3 of 25)	3198	NM_027886	71728	Mm.312650	NM_027886	ENSMUSG00000026213	Stk11ip	1200014D22Rik|BB131189|LIP1|LKB1IP	serine/threonine kinase 11 interacting protein	protein-coding
unique_peak2-34567-5-9--1.02630843089322-1.21398586181642	chr14	65968660	65969098	+	0	NA	Intergenic	Intergenic	-8634	NM_199029	380912	Mm.270087	NM_199029	ENSMUSG00000034522	Zfp395	BC053701|Gm910	zinc finger protein 395	protein-coding
common_peak2-27932-14-10-0.439784541720347-0.519648556297791	chr4	21776167	21776697	+	0	NA	promoter-TSS (NR_028384)	promoter-TSS (NR_028384)	-837	NR_028384	67735	Mm.391650	NR_028384		4930528A17Rik	-	RIKEN cDNA 4930528A17 gene	ncRNA
common_peak1-13910-108-178--0.113638815856187-0.408046540016924	chr2	80580132	80581723	+	0	NA	Intergenic	Intergenic	101506	NM_001190179	69482	Mm.29200	NM_027091		Nup35	2310006I24Rik|35kDa|5330402E05Rik|MP44|NO44	nucleoporin 35	protein-coding
unique_peak1-5563-10-4-1.03448725012141-1.5150158574804	chr5	146867894	146868458	+	0	NA	Intergenic	ETnERV2-int|LTR|ERVK	-22658	NM_001105160	100041449	Mm.301900	NM_001105160	ENSMUSG00000061292	Cyp3a59	ENSMUSG00000061292	cytochrome P450, family 3, subfamily a, polypeptide 59	protein-coding
unique_peak2-33258-7-12--0.901348887842903-1.31827279259406	chr10	128176113	128176777	+	0	NA	intron (NM_016811, intron 1 of 23)	B2_Mm1a|SINE|B2	4667	NM_016811	13139	Mm.291235	NM_016811	ENSMUSG00000025357	Dgka	80kDa|AW146112|Dagk1	diacylglycerol kinase, alpha	protein-coding
common_peak1-8864-57-42-0.839768285376831-2.56976710895951	chr11	33659662	33661760	+	0	NA	intron (NM_001190885, intron 1 of 8)	B1F1|SINE|Alu	82874	NM_027398	70357	Mm.252514	NM_027398	ENSMUSG00000053519	Kcnip1	KCHIP1|Kchip1.2	Kv channel-interacting protein 1	protein-coding
common_peak2-27044-16-15-0.118263642268062-0.328191099940264	chr2	180225504	180226277	+	0	NA	Intergenic	Intergenic	-8791	NM_018766	18216	Mm.301712	NM_018766	ENSMUSG00000027568	Ntsr1	NT-1R|NTR-1|NTR1	neurotensin receptor 1	protein-coding
unique_peak1-1205-8-6-0.197867495889966-1.03789460276074	chr11	105946916	105947455	+	0	NA	intron (NM_011947, intron 1 of 15)	intron (NM_011947, intron 1 of 15)	969	NM_011947	26406	Mm.27041	NM_011947	ENSMUSG00000020700	Map3k3	AW548911|MAPKKK3|Mekk3|mKIAA4031	mitogen-activated protein kinase kinase kinase 3	protein-coding
unique_peak1-6060-9-3-1.18961340640422-1.57096726280955	chr6	116003980	116004493	+	0	NA	intron (NM_177412, intron 3 of 5)	intron (NM_177412, intron 3 of 5)	-59213	NM_026376	67784	Mm.3085	NM_026376	ENSMUSG00000030123	Plxnd1	6230425C21Rik|b2b1863Clo|b2b553Clo	plexin D1	protein-coding
common_peak1-9524-23-16-0.634304663258741-0.82304638657543	chr11	115876805	115877776	+	0	NA	Intergenic	ORR1E|LTR|MaLR	-3257	NM_016905	14635	Mm.2820	NM_016905	ENSMUSG00000020766	Galk1	AA409894|GALK|Gk|Glk|Glk1	galactokinase 1	protein-coding
common_peak1-10089-9-24--1.4542427833705-1.83731222263754	chr13	23751163	23751690	+	0	NA	Intergenic	Intergenic	24402	NM_178189	319164	Mm.261973	NM_178189	ENSMUSG00000069270	Hist1h2ac	-	histone cluster 1, H2ac	protein-coding
unique_peak2-35161-3-6--1.22133801201688-1.08602067057793	chr16	34081793	34082197	+	0	NA	intron (NM_177357, intron 34 of 59)	intron (NM_177357, intron 34 of 59)	-114906	NM_009471	22247	Mm.13145	NM_009471	ENSMUSG00000022814	Umps	1700095D23Rik|AA408257|AL033308|BB164745	uridine monophosphate synthetase	protein-coding
common_peak1-14668-11-5-0.923731083530457-1.477227296591	chr3	59279231	59279854	+	0	NA	Intergenic	Intergenic	-131364	NM_001162884	242050	Mm.228086	NM_001162884	ENSMUSG00000036334	Igsf10	6530405F15Rik|9030224D03|AA409708|AA536958|AI414626|Adlican2|CMF608	immunoglobulin superfamily, member 10	protein-coding
unique_peak2-38095-5-15--1.70438033600585-1.4372489031793	chr6	58831337	58831975	+	0	NA	intron (NM_028705, intron 15 of 24)	intron (NM_028705, intron 15 of 24)	25464	NM_021432	58243	Mm.389747	NM_021432	ENSMUSG00000055430	Nap1l5	1110020M21Rik	nucleosome assembly protein 1-like 5	protein-coding
unique_peak2-36417-4-7--1.02346051385325-1.09384600808989	chr2	127792398	127792856	+	0	NA	intron (NM_028765, intron 9 of 17)	L1Md_T|LINE|L1	112263	NM_028765	74121	Mm.244835	NM_028765	ENSMUSG00000027380	Acoxl	1200014P05Rik|AV025673	acyl-Coenzyme A oxidase-like	protein-coding
unique_peak2-38425-10-12--0.344024373132323-0.340565874754526	chr7	25430259	25430984	+	0	NA	Intergenic	Intergenic	9032	NM_133743	72434	Mm.281093	NM_133743	ENSMUSG00000057454	Lypd3	2310061G07Rik|C4.4a	Ly6/Plaur domain containing 3	protein-coding
common_peak1-10351-11-13--0.298661337805991-0.337263207250336	chr13	80963054	80963562	+	0	NA	Intergenic	RMER17C|LTR|ERVK	-59375	NM_001042591	105171	Mm.423137	NM_001042591	ENSMUSG00000074794	Arrdc3	AI450344|mKIAA1376	arrestin domain containing 3	protein-coding
common_peak1-9096-16-23--0.466698858453094-0.497202060940027	chr11	70409490	70410207	+	0	NA	intron (NM_176893, intron 1 of 31)	intron (NM_176893, intron 1 of 31)	-19548	NM_001145537	668433	Mm.425687	NM_001145537	ENSMUSG00000087279	4930544D05Rik	-	RIKEN cDNA 4930544D05 gene	protein-coding
unique_peak1-713-22-1-3.6472841050874-6.28700305248716	chr10	87016255	87017046	+	0	NA	intron (NM_008777, intron 3 of 12)	intron (NM_008777, intron 3 of 12)	32110	NM_008777	18478	Mm.263539	NM_008777	ENSMUSG00000020051	Pah	AW106920	phenylalanine hydroxylase	protein-coding
common_peak2-30117-95-103-0.447475626882922-1.65486731105564	chr6	136827408	136828756	+	0	NA	Intergenic	Intergenic	-3756	NM_008597	17313	Mm.243085	NM_008597	ENSMUSG00000030218	Mgp	Mglap	matrix Gla protein	protein-coding
common_peak1-10174-33-32-0.286943443167075-0.49444889977478	chr13	40859648	40861178	+	0	NA	Intergenic	RLTR31A_Mm|LTR|ERVK	-31221	NM_011547	21418	Mm.85544	NM_011547	ENSMUSG00000021359	Tfap2a	AP-2|AP2alpha|Ap2|Ap2tf|Tcfap2a	transcription factor AP-2, alpha	protein-coding
common_peak2-21271-35-48--0.183339585652704-0.360715883817177	chr11	69900477	69902048	+	0	NA	Intergenic	Intergenic	-4884	NM_007493	11890	Mm.1357	NM_007493	ENSMUSG00000040963	Asgr2	ASGPR2|Asgr|Asgr-2	asialoglycoprotein receptor 2	protein-coding
common_peak1-10085-34-48--0.232641317113942-0.387953346623085	chr13	23621520	23622742	+	0	NA	promoter-TSS (NM_153173)	promoter-TSS (NM_153173)	-782	NM_153173	69386	Mm.158272	NM_153173	ENSMUSG00000060981	Hist1h4h	1700024H08Rik	histone cluster 1, H4h	protein-coding
unique_peak1-6622-10-1-2.35641534500877-2.57096726280955	chr8	5031343	5031833	+	0	NA	Intergenic	Lx4A|LINE|L1	73644	NM_011388	20494	Mm.3500	NM_011388	ENSMUSG00000023073	Slc10a2	ASBT|ISBT	solute carrier family 10, member 2	protein-coding
unique_peak2-32505-7-10--0.660340788339108-1.12966497611638	chr1	51290508	51291179	+	0	NA	intron (NR_045151, intron 4 of 4)	Lx|LINE|L1	-55127	NM_138741	20324	Mm.398690	NM_138741	ENSMUSG00000045954	Sdpr	-	serum deprivation response	protein-coding
unique_peak2-35512-2-7--1.91745425626332-1.45399745587252	chr17	47630480	47630970	+	0	NA	intron (NM_022015, intron 6 of 8)	MIRm|SINE|MIR	8511	NM_022015	63856	Mm.275901	NM_022015	ENSMUSG00000023980	Taf8	AW260255|Tbn	TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factorq	protein-coding
common_peak2-21840-31-21-0.765807052175826-1.27201509741564	chr11	120762617	120763760	+	0	NA	intron (NM_027745, intron 7 of 18)	intron (NM_027745, intron 7 of 18)	30998	NM_027745	71276	Mm.275751	NM_027745	ENSMUSG00000048445	Ccdc57	4933434G05Rik	coiled-coil domain containing 57	protein-coding
common_peak1-13075-15-16--0.075298090694683-0.301029995663976	chr19	6476990	6477703	+	0	NA	intron (NM_001205234, intron 9 of 22)	intron (NM_001205234, intron 9 of 22)	58608	NM_001205234	18190	Mm.329616	NM_020253	ENSMUSG00000033768	Nrxn2	6430591O13Rik|mKIAA0921	neurexin II	protein-coding
unique_peak1-925-21-8-1.39956426382392-2.11898024768848	chr11	51768085	51769080	+	0	NA	Intergenic	Intergenic	-12551	NM_029976	52626	Mm.289456	NM_029976	ENSMUSG00000020392	Cdkn2aipnl	A430101B06Rik|AA409260|D11Ertd497e|MNCb-1520	CDKN2A interacting protein N-terminal like	protein-coding
common_peak1-18879-41-23-1.1161862041275-2.80059901349926	chr9	27801355	27802796	+	0	NA	intron (NM_177906, intron 1 of 7)	intron (NM_177906, intron 1 of 7)	203221	NM_177906	330908	Mm.379474	NM_177906	ENSMUSG00000062257	Opcml	2900075O15Rik|3732419F12|AI844366|B930023M13Rik|C230027C17|Gm181|Obcam	opioid binding protein/cell adhesion molecule-like	protein-coding
unique_peak2-32629-3-10--1.87341470859657-1.75805390616669	chr1	121351309	121351886	+	0	NA	Intergenic	Intergenic	-32772	NM_008381	16324	Mm.3092	NM_008381	ENSMUSG00000037035	Inhbb	-	inhibin beta-B	protein-coding
common_peak2-28552-20-36--0.721378581037757-1.04213512323541	chr5	4192104	4192994	+	0	NA	intron (NM_001042670, intron 1 of 1)	CpG	182	NM_001042670	208595	Mm.129815	NM_001042670	ENSMUSG00000053178	Mterf1b	ENSMUSG00000053178|Gm9897	mitochondrial transcription termination factor 1b	protein-coding
common_peak2-26655-51-49-0.431067635827849-0.910002444715788	chr2	120976947	120977773	+	0	NA	intron (NM_029475, intron 7 of 9)	intron (NM_029475, intron 7 of 9)	9531	NM_029475	75894	Mm.384805	NM_029475	ENSMUSG00000027259	Adal	4930578F03Rik	adenosine deaminase-like	protein-coding
unique_peak1-5665-24-2-3.20824740204656-6.14077709290365	chr6	31070171	31071167	+	0	NA	intron (NR_110471, intron 3 of 3)	intron (NR_110471, intron 3 of 3)	-57576	NR_029532	387223		NR_029532	miRBase:MI0000143	Mir29b-1	Mirn29b|Mirn29b-1	microRNA 29b-1	ncRNA
common_peak1-17345-30-29-0.262784813883354-0.465043498729215	chr6	149408610	149409826	+	0	NA	intron (NM_001112796, intron 1 of 7)	intron (NM_001112796, intron 1 of 7)	51712	NM_009753	12121	Mm.177181	NM_009753	ENSMUSG00000003452	Bicd1	B830009D06Rik	bicaudal D homolog 1 (Drosophila)	protein-coding
common_peak1-11184-11-11--0.0762689164695427-0.301029995663976	chr15	76879268	76879836	+	0	NA	intron (NM_028010, intron 3 of 4)	(CAAAC)n|Simple_repeat|Simple_repeat	1546	NM_013593	17189	Mm.404074	NM_013593	ENSMUSG00000018893	Mb	AI325109	myoglobin	protein-coding
common_peak1-13681-42-67--0.345133513383155-0.604904474110885	chr2	29619647	29620691	+	0	NA	TTS (NM_001177392)	TTS (NM_001177392)	3121	NM_001177392	433416	Mm.330112	NM_001034887	ENSMUSG00000075425	Gm13547	OTTMUSG00000012686	predicted gene 13547	protein-coding
common_peak2-23454-12-9-0.326847890200276-0.459837087125828	chr15	66843193	66843647	+	0	NA	Intergenic	Intergenic	-42217	NM_008681	17988	Mm.30837	NM_008681	ENSMUSG00000005125	Ndrg1	CAP43|CMT4D|DRG1|HMSNL|NMSL|Ndr1|Ndrl|PROXY1|RTP|TDD5	N-myc downstream regulated gene 1	protein-coding
unique_peak2-34052-4-11--1.6084230145744-1.68134727924692	chr12	116405494	116405838	+	0	NA	Intergenic	Intergenic	528339	NR_105810	102465205		NR_105810	miRBase:MI0021920	Mir6388	mmu-mir-6388	microRNA mir-6388	ncRNA
common_peak2-21222-49-46-0.451694971347546-0.943512743618327	chr11	62538557	62539399	+	0	NA	intron (NM_133208, intron 2 of 4)	intron (NM_133208, intron 2 of 4)	3617	NM_133208	170740	Mm.339982	NM_133208		Zfp287	B230333C16Rik|SKAT-2|Skat2|Znf287|mszf16|mszf74	zinc finger protein 287	protein-coding
unique_peak2-37818-1-7--2.62705701021674-1.80617997398389	chr5	124997932	124998350	+	0	NA	intron (NM_019770, intron 3 of 3)	intron (NM_019770, intron 3 of 3)	-4732	NM_001190795	67848	Mm.281601	NM_026409	ENSMUSG00000029389	Ddx55	2810021H22Rik|mKIAA1595	DEAD (Asp-Glu-Ala-Asp) box polypeptide 55	protein-coding
unique_peak2-35420-3-6--1.22133801201688-1.08602067057793	chr17	34027336	34027759	+	0	NA	promoter-TSS (NM_001195298)	promoter-TSS (NM_001195298)	31	NM_001195298	100502766	Mm.335713	NM_001195298	ENSMUSG00000079553	Kifc1	100042970|Gm4137|HSET|KNSL2|Kifc5a|Knsl2a|Tctex-7|Tctex-7A|Tctex7|Tctex7a	kinesin family member C1	protein-coding
unique_peak2-34240-5-9--1.02630843089322-1.21398586181642	chr13	54101394	54101877	+	0	NA	Intergenic	Intergenic	48514	NM_001291801	13488	Mm.54161	NM_010076	ENSMUSG00000021478	Drd1a	C030036C15Rik|Drd-1|Drd1|Gpcr15	dopamine receptor D1A	protein-coding
common_peak1-7600-40-64--0.363392130277356-0.620825172320003	chr1	58392885	58394060	+	0	NA	exon (NM_001008419, exon 24 of 36)	exon (NM_001008419, exon 24 of 36)	-56508	NM_025824	66882	Mm.21848	NM_025824	ENSMUSG00000051223	Bzw1	1200015E15Rik|mKIAA0005	basic leucine zipper and W2 domains 1	protein-coding
unique_peak1-6074-9-1-2.18961340640422-2.31132995230379	chr6	120146489	120146921	+	0	NA	intron (NM_016718, intron 1 of 3)	intron (NM_016718, intron 1 of 3)	97872	NM_198884	330406	Mm.321840	NM_198884	ENSMUSG00000041372	B4galnt3	AB114826|B4GalNAcT3|C330047A21	beta-1,4-N-acetyl-galactosaminyl transferase 3	protein-coding
common_peak1-17498-16-16-0.0308008010177225-0.307611222530525	chr7	25278669	25279422	+	0	NA	intron (NM_153112, intron 1 of 8)	intron (NM_153112, intron 1 of 8)	12003	NM_153112	260299	Mm.178322	NM_153112	ENSMUSG00000054793	Cadm4	Igdf4c|Igsf4c|Tsll2	cell adhesion molecule 4	protein-coding
common_peak1-16306-14-10-0.439784541720347-0.519648556297791	chr5	114373064	114373783	+	0	NA	Intergenic	Intergenic	-14708	NM_011779	23790	Mm.260158	NM_011779	ENSMUSG00000004530	Coro1c	AL022675|AW455561|AW548837	coronin, actin binding protein 1C	protein-coding
unique_peak2-38034-0-4--3.16205902536157-1.10720996964787	chr6	38198719	38199147	+	0	NA	intron (NM_194061, intron 1 of 19)	B2_Mm2|SINE|B2	5076	NM_194061	330286	Mm.277163	NM_194061	ENSMUSG00000063455	D630045J12Rik	Kiaa1549|mKIAA1549	RIKEN cDNA D630045J12 gene	protein-coding
common_peak1-19023-29-23-0.527327579893955-0.844067898188802	chr9	63726003	63727122	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-120761	NM_016769	17127	Mm.7320	NM_016769	ENSMUSG00000032402	Smad3	AU022421|Madh3	SMAD family member 3	protein-coding
common_peak1-8153-20-8-1.31814978314888-1.77631109801764	chr1	191817127	191817940	+	0	NA	Intergenic	Intergenic	-71366	NM_026796	226830	Mm.156895	NM_026796	ENSMUSG00000026603	Smyd2	1110020E07Rik|4930402C15|KMT3C|Zmynd14	SET and MYND domain containing 2	protein-coding
common_peak1-10980-8-13--0.802132504110034-0.562038191119711	chr15	31568294	31568828	+	0	NA	Intergenic	Intergenic	36690	NM_026546	68073	Mm.119185	NM_026546	ENSMUSG00000039065	Fam173b	A930016P21Rik|AA987072	family with sequence similarity 173, member B	protein-coding
unique_peak2-36316-2-4--1.23938235115068-0.931118710592187	chr2	79397748	79398096	+	0	NA	Intergenic	Intergenic	-77660	NM_080558	70599	Mm.272881	NM_080558	ENSMUSG00000027007	Ssfa2	5730488C15Rik|CS-1|CS1|KRAP|SPAG13|mKIAA1927	sperm specific antigen 2	protein-coding
common_peak2-23160-24-18-0.545282389324131-0.776879508296351	chr14	121183767	121184674	+	0	NA	Intergenic	Lx2B|LINE|L1	-126196	NM_023579	70572	Mm.221452	NM_023579	ENSMUSG00000030662	Ipo5	1110011C18Rik|5730478E03Rik|AA409333|C76941|IMB3|Kpnb3|Ranbp5	importin 5	protein-coding
common_peak2-22672-16-10-0.658832023630764-0.699649909729472	chr13	97240402	97240956	+	0	NA	intron (NM_001042714, intron 1 of 13)	intron (NM_001042714, intron 1 of 13)	436	NM_001042714	271144	Mm.470057	NM_001042714	ENSMUSG00000047117	Ankdd1b	9330128J19Rik	ankyrin repeat and death domain containing 1B	protein-coding
common_peak1-10254-36-73--0.730132279461196-1.75762453057467	chr13	55189309	55190490	+	0	NA	intron (NM_001293660, intron 2 of 12)	ORR1E|LTR|MaLR	11757	NM_011307	20184	Mm.259301	NM_011307	ENSMUSG00000025878	Uimc1	9430016E08Rik|D330018D10Rik|D630032M02Rik|RIP110|Rxrip110	ubiquitin interaction motif containing 1	protein-coding
unique_peak1-4038-11-7-0.508693584251613-1.21681515183528	chr2	58549410	58550036	+	0	NA	intron (NM_001289660, intron 1 of 7)	B1_Mur2|SINE|Alu	-57872	NM_001289659	76654	Mm.200370	NM_029692	ENSMUSG00000026839	Upp2	1700124F02Rik|AI266885|UDRPASE2|UP2|UPASE2	uridine phosphorylase 2	protein-coding
unique_peak1-5780-10-3-1.35641534500877-1.75805390616669	chr6	54283131	54283865	+	0	NA	intron (NR_033635, intron 3 of 13)	intron (NR_033635, intron 3 of 13)	6492	NM_030024	78004	Mm.41984	NM_030024	ENSMUSG00000045725	Prr15	E130201N16Rik|G90	proline rich 15	protein-coding
common_peak2-26691-254-403-0.199399250348122-1.2337552967931	chr2	126674387	126676662	+	0	NA	intron (NM_021450, intron 5 of 38)	intron (NM_021450, intron 5 of 38)	26473	NM_001164325	58800	Mm.244705	NM_021450	ENSMUSG00000027365	Trpm7	2310022G15Rik|4833414K03Rik|5033407O22Rik|CHAK|CHAK1|LTrpC-7|Ltpr7|Ltrpc7|TRPPLIK	transient receptor potential cation channel, subfamily M, member 7	protein-coding
common_peak2-31224-20-37--0.759852728852392-1.13829382151971	chr8	69790798	69791911	+	0	NA	Intergenic	RMER13A|LTR|ERVK	-223303	NM_008673	17960	Mm.14125	NM_008673	ENSMUSG00000025588	Nat1	Nat-1	N-acetyl transferase 1	protein-coding
common_peak1-12275-52-96--0.491652851921429-1.26475411759558	chr17	44238664	44240559	+	0	NA	5' UTR (NM_199016, exon 2 of 4)	5' UTR (NM_199016, exon 2 of 4)	3146	NM_199016	224794	Mm.255971	NM_199016	ENSMUSG00000023961	Enpp4	4933413N07Rik|AA986363|AI195364|E-NPP 4|Gm90|mKIAA0879	ectonucleotide pyrophosphatase/phosphodiesterase 4	protein-coding
unique_peak1-5117-10-0-3.35641534500877-3.31132995230379	chr5	24854274	24854792	+	0	NA	intron (NM_001081383, intron 24 of 58)	intron (NM_001081383, intron 24 of 58)	125822	NM_144908	231050	Mm.246718	NM_144908	ENSMUSG00000038072	Galnt11	A430075I06Rik|AI648252|E430002F06Rik	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11	protein-coding
common_peak2-20822-27-40--0.366006053722848-0.494448899774786	chr10	128376537	128377656	+	0	NA	intron (NM_008398, intron 3 of 24)	B4|SINE|B4	6227	NM_008398	16404	Mm.179747	NM_008398	ENSMUSG00000025348	Itga7	[a]7|alpha7	integrin alpha 7	protein-coding
unique_peak2-39663-3-10--1.87341470859657-1.75805390616669	chr9	107553991	107554525	+	0	NA	3' UTR (NM_023805, exon 16 of 16)	3' UTR (NM_023805, exon 16 of 16)	15472	NM_023805	76257	Mm.296560	NM_023805	ENSMUSG00000010064	Slc38a3	0610012J02Rik|D9Ucla2|Nat1|Slc38-3|Sn1|Snat3|mNAT	solute carrier family 38, member 3	protein-coding
common_peak2-30915-15-16--0.075298090694683-0.301029995663976	chr7	144739483	144740076	+	0	NA	Intergenic	Lx6|LINE|L1	110422	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
common_peak2-30014-44-63--0.178107165431465-0.366201338534461	chr6	124964573	124966171	+	0	NA	intron (NM_175557, intron 2 of 10)	ORR1A2|LTR|MaLR	5685	NM_175557	269800	Mm.108677	NM_175557	ENSMUSG00000038346	Zfp384	BB163993|C130073D16Rik|Ciz|NP|Nmp4	zinc finger protein 384	protein-coding
unique_peak2-37196-13-9-0.456543935750406-0.53895475198017	chr4	59315568	59316185	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	42953	NR_105031	101055769	Mm.421401	NR_105031		LOC101055769	-	uncharacterized LOC101055769	ncRNA
common_peak2-19744-16-15-0.118263642268062-0.328191099940264	chr1	74396449	74397247	+	0	NA	intron (NM_019999, intron 6 of 8)	intron (NM_019999, intron 6 of 8)	-11834	NM_001033345	241112	Mm.310460	NM_001033345	ENSMUSG00000073650	Catip	Gm216	ciliogenesis associated TTC17 interacting protein	protein-coding
unique_peak2-39889-6-10--0.894033508256995-1.21398586181642	chrX	75514251	75514722	+	0	NA	Intergenic	L1Md_T|LINE|L1	-23226	NM_001126321	236874	Mm.371699	NM_001126321	ENSMUSG00000079519	Gm14743	OTTMUSG00000017864	predicted gene 14743	protein-coding
common_peak2-19637-83-116-0.0438579055227217-0.323937522245888	chr1	39900224	39901698	+	0	NA	intron (NR_040465, intron 3 of 4)	intron (NR_040465, intron 3 of 4)	3214	NR_040465	73426	Mm.396239	NR_040465		1700066B17Rik	-	RIKEN cDNA 1700066B17 gene	ncRNA
common_peak1-10312-21-12-0.869049547125143-1.18646456559501	chr13	67552437	67553186	+	0	NA	promoter-TSS (NM_177712)	promoter-TSS (NM_177712)	-251	NM_177712	238692	Mm.486478	NM_177712	ENSMUSG00000069206	Zfp874a	C330011K17Rik|Rslcan15|Zfp874	zinc finger protein 874a	protein-coding
unique_peak2-35174-4-7--1.02346051385325-1.09384600808989	chr16	43458865	43459260	+	0	NA	intron (NM_001285805, intron 4 of 10)	intron (NM_001285805, intron 4 of 10)	-38753	NR_046026	626693	Mm.447083	NR_046026	ENSMUSG00000085499	Gm15713	OTTMUSG00000025617	predicted gene 15713	ncRNA
unique_peak2-38371-0-7--3.84013093047421-1.80617997398389	chr7	7074633	7075055	+	0	NA	promoter-TSS (NM_172738)	promoter-TSS (NM_172738)	-657	NM_172738	232853	Mm.23838	NM_172738	ENSMUSG00000062116	Zfp954	5730403M16Rik|8030437F07|AA123315	zinc finger protein 954	protein-coding
common_peak1-13784-26-30--0.0262972182284127-0.301029995663988	chr2	38286479	38287556	+	0	NA	Intergenic	Intergenic	80189	NM_010710	16870	Mm.142856	NM_010710	ENSMUSG00000000247	Lhx2	LH2A|Lh-2|Lim2|ap|apterous	LIM homeobox protein 2	protein-coding
common_peak2-27442-15-23--0.5727977501655-0.575340103425218	chr3	89997727	89998679	+	0	NA	intron (NM_029937, intron 32 of 39)	RSINE1|SINE|B4	19366	NM_001190258	100043813	Mm.270283	NM_001190258	ENSMUSG00000050621	Rps27rt	ENSMUSG00000050621|Gm9846|Rps27l2	ribosomal protein S27, retrogene	protein-coding
common_peak2-23560-12-10-0.189344366450341-0.386243247519795	chr15	79326517	79326940	+	0	NA	intron (NM_008427, intron 1 of 1)	(TCCA)n|Simple_repeat|Simple_repeat	8943	NM_008427	16520	Mm.140760	NM_008427	ENSMUSG00000044216	Kcnj4	IRK3|Kcnf2|MB-IRK3	potassium inwardly-rectifying channel, subfamily J, member 4	protein-coding
unique_peak1-6867-15-8-0.842239749113344-0.891319708951327	chr8	88113741	88114587	+	0	NA	Intergenic	Intergenic	-34994	NM_019794	56445	Mm.475573	NM_019794	ENSMUSG00000031701	Dnaja2	1500017M13Rik|2010206B19Rik|DNAJ|DNJ3|Dnaj3|HIRIP4|PRO3015|mDj3	DnaJ (Hsp40) homolog, subfamily A, member 2	protein-coding
common_peak1-15237-84-120-0.0160708216144307-0.304619247117288	chr4	6453156	6454572	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-72446	NM_010945	18201	Mm.3059	NM_010945	ENSMUSG00000028245	Nsmaf	AA959567|C630007J05|Fan	neutral sphingomyelinase (N-SMase) activation associated factor	protein-coding
common_peak1-13086-45-31-0.860358025344872-2.10802515387389	chr19	6986735	6988032	+	0	NA	intron (NM_007953, intron 4 of 6)	intron (NM_007953, intron 4 of 6)	1393	NR_105956	102466213		NR_105956		Mir6990	mmu-mir-6990	microRNA mir-6990	ncRNA
common_peak1-18236-12-16--0.4386868561627-0.368541233333383	chr8	27128034	27128721	+	0	NA	Intergenic	ORR1B2|LTR|MaLR	-2304	NM_008033	14272	Mm.3496	NM_008033	ENSMUSG00000015994	Fnta	FTA	farnesyltransferase, CAAX box, alpha	protein-coding
common_peak1-14571-8-7-0.00522241794757061-1.00793137938329	chr3	37975731	37976255	+	0	NA	Intergenic	Intergenic	131048	NR_040541	71342	Mm.410782	NR_040541		5430434I15Rik	-	RIKEN cDNA 5430434I15 gene	ncRNA
common_peak2-31848-32-49--0.364764170555064-0.548322060310103	chr9	46012723	46013704	+	0	NA	intron (NM_027498, intron 15 of 24)	intron (NM_027498, intron 15 of 24)	-23500	NM_009692	11806	Mm.26743	NM_009692	ENSMUSG00000032083	Apoa1	Alp-1|Apoa-1|Brp-14|Ltw-1|Lvtw-1|Sep-1|Sep-2|Sep2|apo-AI|apoA-I	apolipoprotein A-I	protein-coding
unique_peak2-35132-2-5--1.50241675698448-1.08602067057793	chr16	30504186	30504607	+	0	NA	Intergenic	Intergenic	46268	NM_172614	224090	Mm.241459	NM_172614		Tmem44	1700007N03Rik|9330161C17Rik|B230220N21	transmembrane protein 44	protein-coding
common_peak2-28608-9-6-0.382258484346616-1.11707584880836	chr5	24030258	24030655	+	0	NA	intron (NM_015739, intron 1 of 1)	intron (NM_015739, intron 1 of 1)	2210	NM_015739	231044	Mm.246596	NM_015739		Gbx1	Gbx-1	gastrulation brain homeobox 1	protein-coding
unique_peak1-4321-14-5-1.31425365963649-1.4372489031793	chr2	150914553	150915382	+	0	NA	exon (NM_001097977, exon 2 of 4)	exon (NM_001097977, exon 2 of 4)	3119	NM_001097977	433486	Mm.422661	NM_001097977	ENSMUSG00000079006	Gm14151	OTTMUSG00000015806	predicted gene 14151	protein-coding
common_peak2-29987-39-47-0.0307987461979975-0.310078451983505	chr6	122339485	122340640	+	0	NA	Intergenic	RLTR10B|LTR|ERVK	-49817	NM_001271579	13619	Mm.6822	NM_007905	ENSMUSG00000040669	Phc1	AW557034|Edr|Edr1|Mph1|Rae-28|rae28	polyhomeotic-like 1 (Drosophila)	protein-coding
unique_peak1-6994-22-4-2.32535601020004-3.9780981129625	chr8	121580195	121581289	+	0	NA	intron (NM_019707, intron 6 of 13)	intron (NM_019707, intron 6 of 13)	-287696	NM_024219	68196	Mm.358714	NM_024219	ENSMUSG00000031839	Hsbp1	0610007A03Rik|AA408769|Hsp25	heat shock factor binding protein 1	protein-coding
unique_peak1-1793-8-3-1.00522241794757-1.39487600375387	chr14	24212884	24213368	+	0	NA	intron (NM_001253372, intron 18 of 28)	intron (NM_001253372, intron 18 of 28)	-299333	NR_033550	791307	Mm.364384	NR_033550	ENSMUSG00000068680	Gm10248	ENSMUSG00000068680	predicted gene 10248	ncRNA
common_peak1-18392-14-21--0.560215458279653-0.519193887192484	chr8	71469250	71469956	+	0	NA	Intergenic	L1_Mus3|LINE|L1	65149	NM_008509	16956	Mm.1514	NM_008509	ENSMUSG00000015568	Lpl	-	lipoprotein lipase	protein-coding
unique_peak2-35339-3-5--0.998945590680433-0.96108193396963	chr17	24162779	24163210	+	0	NA	Intergenic	MTC-int|LTR|MaLR	-12216	NM_175440	213171	Mm.133083	NM_175440	ENSMUSG00000050762	Prss27	CAPH2|Mpn|marapsin	protease, serine 27	protein-coding
common_peak2-28224-12-9-0.326847890200276-0.459837087125828	chr4	119108829	119109295	+	0	NA	intron (NM_001014900, intron 2 of 7)	URR1B|DNA|MER1_type	13773	NM_001014900	332934	Mm.388911	NM_001014900	ENSMUSG00000070806	Zmynd12	AI414736	zinc finger, MYND domain containing 12	protein-coding
common_peak1-11923-27-15-0.991545950895236-1.66700866096458	chr17	56163712	56164578	+	0	NA	intron (NM_001252471, intron 1 of 8)	intron (NM_001252471, intron 1 of 8)	11915	NM_013664	20405	Mm.1773	NM_013664	ENSMUSG00000003200	Sh3gl1	C77078|EEN|SH3P8|Sh3d2b	SH3-domain GRB2-like 1	protein-coding
common_peak1-14707-50-66--0.0251488739788197-0.30102999566397	chr3	69721747	69723305	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-58710	NM_001286959	66183	Mm.45481	NM_133675	ENSMUSG00000043461	Sptssb	1110032A04Rik|ADMP|Sssptb	serine palmitoyltransferase, small subunit B	protein-coding
common_peak1-18702-16-19--0.203664452619301-0.325169893479371	chr8	121828950	121829939	+	0	NA	intron (NM_019707, intron 11 of 13)	L1MB7|LINE|L1	-38994	NM_024219	68196	Mm.358714	NM_024219	ENSMUSG00000031839	Hsbp1	0610007A03Rik|AA408769|Hsp25	heat shock factor binding protein 1	protein-coding
unique_peak1-1184-10-5-0.771452844287613-1.33892459842472	chr11	100999260	100999736	+	0	NA	Intergenic	Intergenic	-17700	NM_134028	103768	Mm.142348	NM_134028	ENSMUSG00000045007	Tubg2	AI504772|Tubgl	tubulin, gamma 2	protein-coding
common_peak1-7706-52-17-1.93833498882339-7.62096174012085	chr1	86436550	86438714	+	0	NA	Intergenic	Intergenic	1057753	NM_030194	109032	Mm.335802	NM_030194	ENSMUSG00000070034	Sp110	5031415C07Rik|52kDa|5830484A20Rik|ENSMUSG00000075603|Ifi75|Ipr1	Sp110 nuclear body protein	protein-coding
common_peak1-15907-31-45--0.29832328524389-0.470780655014941	chr5	21701343	21702262	+	0	NA	intron (NM_011261, intron 3 of 63)	intron (NM_011261, intron 3 of 63)	148721	NM_011261	19699	Mm.425236	NM_011261	ENSMUSG00000042453	Reln	reeler|rl	reelin	protein-coding
common_peak1-14801-9-11--0.395349094316936-0.344532117358383	chr3	90080429	90080879	+	0	NA	intron (NM_201407, intron 19 of 27)	B3|SINE|B2	6583	NR_105979	102465612		NR_105979		Mir7012	mmu-mir-7012	microRNA mir-7012	ncRNA
unique_peak1-3891-10-4-1.03448725012141-1.5150158574804	chr2	18059057	18059637	+	0	NA	intron (NR_045538, intron 8 of 22)	intron (NR_045538, intron 8 of 22)	73135	NM_001252561	17354	Mm.209175	NM_010804	ENSMUSG00000026743	Mllt10	Af10|B130021D15Rik|D630001B22Rik|mKIAA4140	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	protein-coding
common_peak1-16303-13-13--0.0288828914198356-0.309074325783021	chr5	114356437	114357233	+	0	NA	intron (NM_011779, intron 1 of 10)	intron (NM_011779, intron 1 of 10)	1880	NM_011779	23790	Mm.260158	NM_011779	ENSMUSG00000004530	Coro1c	AL022675|AW455561|AW548837	coronin, actin binding protein 1C	protein-coding
unique_peak2-35504-4-7--1.02346051385325-1.09384600808989	chr17	46879444	46879934	+	0	NA	intron (NM_028065, intron 3 of 5)	intron (NM_028065, intron 3 of 5)	9472	NM_028065	72029	Mm.240325	NM_028065	ENSMUSG00000023973	Cnpy3	1600025D17Rik|2410050O22Rik|AI413153|CAG4A|ERDA5|PRAT4A|Tnrc5	canopy 3 homolog (zebrafish)	protein-coding
unique_peak2-34036-4-6--0.830815435910851-0.989110657569874	chr12	112588685	112589067	+	0	NA	intron (NM_183016, intron 1 of 36)	intron (NM_183016, intron 1 of 36)	27053	NM_183016	217866	Mm.27397	NM_183016	ENSMUSG00000021279	Cdc42bpb	MRCKb	CDC42 binding protein kinase beta	protein-coding
unique_peak2-33564-0-9--4.16205902536157-2.31132995230379	chr11	84080724	84081165	+	0	NA	intron (NM_133360, intron 22 of 53)	B1F|SINE|Alu	72004	NM_133360	107476	Mm.31374	NM_133360	ENSMUSG00000020532	Acaca	A530025K05Rik|Acac|Acc1|Gm738	acetyl-Coenzyme A carboxylase alpha	protein-coding
unique_peak2-36677-5-4--0.0263084308932156-0.909929411522249	chr3	31021480	31021902	+	0	NA	3' UTR (NM_011386, exon 7 of 7)	3' UTR (NM_011386, exon 7 of 7)	-27151	NM_008770	18417	Mm.4425	NM_008770	ENSMUSG00000037625	Cldn11	Claudin-11|Claudin11|Osp|Otm	claudin 11	protein-coding
common_peak2-23814-26-22-0.404337136101449-0.569352520859861	chr15	101174031	101175091	+	0	NA	Intergenic	Lx3B|LINE|L1	-25222	NR_035462	100316694		NR_035462	miRBase:MI0009930	Mir1941	mmu-mir-1941	microRNA 1941	ncRNA
common_peak1-15366-15-20--0.380152672223105-0.397739447719386	chr4	59002995	59003822	+	0	NA	Intergenic	Intergenic	-3458	NM_025968	67103	Mm.34497	NM_025968	ENSMUSG00000028378	Ptgr1	2510002C21Rik|Ltb4dh|Zadh3	prostaglandin reductase 1	protein-coding
unique_peak1-377-8-1-2.00522241794757-2.05605744720049	chr1	150145985	150146244	+	0	NA	Intergenic	L1Md_T|LINE|L1	1662300	NM_008869	18783	Mm.4186	NM_008869	ENSMUSG00000056220	Pla2g4a	Pla2g4|cPLA2|cPLA2alpha	phospholipase A2, group IVA (cytosolic, calcium-dependent)	protein-coding
unique_peak1-2120-14-6-1.09186123830004-1.16633110333236	chr15	44426350	44427119	+	0	NA	intron (NM_138674, intron 76 of 76)	B2_Mm1t|SINE|B2	-24453	NM_019480	55960	Mm.287896	NM_019480	ENSMUSG00000022339	Ebag9	AI835379|Rcas1	estrogen receptor-binding fragment-associated gene 9	protein-coding
common_peak2-29476-31-32-0.18084455145467-0.379775532323848	chr6	30692836	30693875	+	0	NA	intron (NM_001252293, intron 6 of 11)	RSINE1|SINE|B4	2056	NR_029900	723930		NR_029900		Mir335	Mirn335|mir-335|mmu-mir-335	microRNA 335	ncRNA
unique_peak2-35951-13-18--0.469455482805817-0.409888142029227	chr19	10690678	10691292	+	0	NA	intron (NM_015735, intron 10 of 26)	intron (NM_015735, intron 10 of 26)	10870	NM_015735	13194	Mm.289915	NM_015735	ENSMUSG00000024740	Ddb1	127kDa|AA408517|p127-Ddb1	damage specific DNA binding protein 1	protein-coding
common_peak1-18002-10-9-0.0344872501214071-1.05503135781948	chr7	139971013	139971635	+	0	NA	intron (NM_212473, intron 1 of 4)	intron (NM_212473, intron 1 of 4)	7294	NM_175268	77938	Mm.225649	NM_175268	ENSMUSG00000030956	Fam53b	A930008G19Rik|mKIAA0140	family with sequence similarity 53, member B	protein-coding
unique_peak1-6430-14-5-1.31425365963649-1.4372489031793	chr7	97356820	97357403	+	0	NA	3' UTR (NM_001252521, exon 20 of 20)	3' UTR (NM_001252521, exon 20 of 20)	56831	NM_029256	75338	Mm.487222	NM_029256	ENSMUSG00000030617	Ccdc83	4930549K11Rik|4930554C01Rik|4932423M01Rik	coiled-coil domain containing 83	protein-coding
common_peak1-9678-43-51-0.082123467382611-0.333814721158537	chr12	8810836	8812173	+	0	NA	Intergenic	Intergenic	33302	NM_011519	20969	Mm.2580	NM_011519	ENSMUSG00000020592	Sdc1	AA408134|AA409076|CD138|Sstn|Synd|Synd1|syn-1	syndecan 1	protein-coding
unique_peak2-37752-4-15--2.02346051385325-2.4322161449009	chr5	111881302	111882119	+	0	NA	intron (NM_001081235, intron 1 of 1)	intron (NM_001081235, intron 1 of 1)	34524	NM_001081235	433938	Mm.332576	NM_001081235	ENSMUSG00000070576	Mn1	AA003644|AA009236	meningioma 1	protein-coding
common_peak1-12263-18-24--0.330937038546373-0.380101753845076	chr17	37045989	37046553	+	0	NA	exon (NM_146077, exon 8 of 8)	exon (NM_146077, exon 8 of 8)	11196	NM_146077	224762	Mm.213417	NM_146077	ENSMUSG00000058063	Trim31	BC026666|HCG1|HCGI|RNF	tripartite motif-containing 31	protein-coding
common_peak1-10525-7-8--0.370834171144123-1.00793137938329	chr14	8304883	8305382	+	0	NA	Intergenic	Intergenic	60145	NR_015568	68308	Mm.390669	NR_015568	ENSMUSG00000090585	4933406F09Rik	1700007H14Rik|4930429F21Rik|4930570O04Rik|Gm3768	RIKEN cDNA 4933406F09 gene	ncRNA
unique_peak1-1551-6-2-0.980435609659146-1.26211192963361	chr13	24617547	24618074	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-56248	NM_001286100	193385	Mm.217319	NM_029679	ENSMUSG00000036006	Fam65b	-	family with sequence similarity 65, member B	protein-coding
unique_peak1-7210-10-4-1.03448725012141-1.5150158574804	chr9	70041742	70042318	+	0	NA	Intergenic	Intergenic	-13127	NM_181072	71602	Mm.249311	NM_181072	ENSMUSG00000032220	Myo1e	2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3	myosin IE	protein-coding
unique_peak2-33061-2-5--1.50241675698448-1.08602067057793	chr10	77200976	77201278	+	0	NA	intron (NM_001287074, intron 1 of 11)	ORR1A3|LTR|MaLR	11896	NM_001205033	100502953	Mm.486157	NM_001205033	ENSMUSG00000096421	Gm10100	ENSMUSG00000061452	predicted gene 10100	protein-coding
unique_peak2-38007-8-10--0.454209200689727-1.078512453669	chr6	30509173	30509692	+	0	NA	intron (NM_001024698, intron 10 of 10)	intron (NM_001024698, intron 10 of 10)	-8944	NM_027926	71791	Mm.105759	NM_027926	ENSMUSG00000039070	Cpa4	1110019K20Rik|AV009555	carboxypeptidase A4	protein-coding
common_peak2-22434-29-31-0.112290080615111-0.353704024845522	chr13	38527360	38528595	+	0	NA	intron (NM_007556, intron 1 of 6)	intron (NM_007556, intron 1 of 6)	90392	NM_007556	12161	Mm.385759	NM_007556	ENSMUSG00000039004	Bmp6	D13Wsu115e|Vgr1	bone morphogenetic protein 6	protein-coding
common_peak2-25006-8-28--1.85275857718-2.85636458546265	chr18	12949165	12949420	+	0	NA	intron (NM_001252490, intron 3 of 13)	intron (NM_001252490, intron 3 of 13)	29124	NR_045524	64291	Mm.259470	NM_020573	ENSMUSG00000044252	Osbpl1a	G430090F17Rik|Gm753|ORP-1|Osbpl1b	oxysterol binding protein-like 1A	protein-coding
common_peak2-29870-23-14-0.814876908900562-1.09492971584134	chr6	108531508	108532175	+	0	NA	intron (NR_104577, intron 5 of 6)	intron (NR_104577, intron 5 of 6)	41320	NR_040757	75394	Mm.395061	NR_040757	ENSMUSG00000087341	0610040F04Rik	-	RIKEN cDNA 0610040F04 gene	ncRNA
common_peak2-31049-18-13-0.505564229170747-0.625923329873571	chr8	15072185	15072872	+	0	NA	intron (NM_008664, intron 6 of 36)	intron (NM_008664, intron 6 of 36)	14875	NM_008664	17930	Mm.272115	NM_008664	ENSMUSG00000031461	Myom2	AW146149	myomesin 2	protein-coding
unique_peak1-4656-11-5-0.923731083530457-1.477227296591	chr3	89646987	89647581	+	0	NA	intron (NM_172530, intron 2 of 5)	intron (NM_172530, intron 2 of 5)	11992	NM_172530	214547	Mm.225	NM_172530	ENSMUSG00000046280	She	9430022A14	src homology 2 domain-containing transforming protein E	protein-coding
unique_peak2-34725-6-7--0.434601889619698-0.97990265578305	chr15	36900330	36900703	+	0	NA	Intergenic	B1F2|SINE|Alu	36641	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
common_peak2-32283-13-16--0.30899081061257-0.330004445983672	chrX	19905002	19905718	+	0	NA	Intergenic	MT2C_Mm|LTR|ERVL	-36247	NM_133669	19889	Mm.288141	NM_133669	ENSMUSG00000060090	Rp2h	AI662636|Rp2	retinitis pigmentosa 2 homolog (human)	protein-coding
common_peak1-17658-17-7-1.21829633820504-1.55050753388977	chr7	63911675	63912431	+	0	NA	Intergenic	RMER15-int|LTR|ERVL	416912	NM_021879	18431	Mm.137052	NM_021879	ENSMUSG00000030450	Oca2	D7H15S12|D7Icr28RN|D7Nic1|p	oculocutaneous albinism II	protein-coding
unique_peak1-2047-18-3-2.31291915122835-3.35694334496952	chr15	27425424	27426211	+	0	NA	intron (NM_020332, intron 1 of 11)	intron (NM_020332, intron 1 of 11)	29385	NM_020332	11732	Mm.265264	NM_020332	ENSMUSG00000022265	Ank	Ankh|D15Ertd221e|ank|mKIAA1581	progressive ankylosis	protein-coding
common_peak2-27616-43-57--0.0754178096038691-0.308785666485011	chr3	104637693	104639227	+	0	NA	intron (NM_009797, intron 5 of 9)	MTC|LTR|MaLR	-16979	NM_001163440	17454	Mm.1597	NM_008619	ENSMUSG00000002227	Mov10	C77703|Mov-10	Moloney leukemia virus 10	protein-coding
common_peak1-11738-10-11--0.228547155712387-0.31137425193576	chr16	33966514	33967023	+	0	NA	intron (NM_009471, intron 1 of 5)	intron (NM_009471, intron 1 of 5)	321	NM_009471	22247	Mm.13145	NM_009471	ENSMUSG00000022814	Umps	1700095D23Rik|AA408257|AL033308|BB164745	uridine monophosphate synthetase	protein-coding
unique_peak1-4763-9-6-0.382258484346616-1.11707584880836	chr3	122131108	122131563	+	0	NA	intron (NM_013867, intron 2 of 11)	intron (NM_013867, intron 2 of 11)	8637	NM_013867	29815	Mm.45815	NM_013867	ENSMUSG00000028121	Bcar3	AI131758|AND-34	breast cancer anti-estrogen resistance 3	protein-coding
common_peak1-12304-18-20--0.0793982715504091-0.301029995663976	chr17	46782223	46783132	+	0	NA	promoter-TSS (NM_025302)	promoter-TSS (NM_025302)	-520	NM_025302	27398	Mm.391007	NM_025302	ENSMUSG00000002767	Mrpl2	CGI-22|MRP-L14|Rpml14	mitochondrial ribosomal protein L2	protein-coding
unique_peak1-448-9-3-1.18961340640422-1.57096726280955	chr1	166049097	166049619	+	0	NA	intron (NM_011347, intron 1 of 15)	intron (NM_011347, intron 1 of 15)	3963	NM_011347	20344	Mm.3337	NM_011347	ENSMUSG00000026580	Selp	CD62P|GMP-140|Grmp|LECAM3|PADGEM	selectin, platelet	protein-coding
unique_peak2-36553-9-21--1.26981821223308-1.37307999835977	chr2	167800320	167801222	+	0	NA	intron (NM_011201, intron 7 of 8)	intron (NM_011201, intron 7 of 8)	35322	NM_001080708	69553	Mm.68454	NM_001080708	ENSMUSG00000074577	Fam65c	2310033K02Rik|Gm124	family with sequence similarity 65, member C	protein-coding
common_peak2-21239-16-11-0.533301141546906-0.58239619684445	chr11	68445444	68446075	+	0	NA	Intergenic	Intergenic	45220	NM_177779	276920	Mm.123046	NM_177779	ENSMUSG00000045915	Ccdc42	A530001H01Rik	coiled-coil domain containing 42	protein-coding
unique_peak2-37749-4-9--1.34538860874061-1.36011389749466	chr5	111204442	111205051	+	0	NA	intron (NM_001025562, intron 3 of 5)	intron (NM_001025562, intron 3 of 5)	4869	NM_019700	56361	Mm.23528	NM_019700	ENSMUSG00000029507	Pus1	A730013B20Rik|MPUS1|mPus1p	pseudouridine synthase 1	protein-coding
common_peak2-19809-37-44-0.034139975156144-0.310681778627721	chr1	88427841	88429681	+	0	NA	Intergenic	Intergenic	5450	NM_008972	19231	Mm.19187	NM_008972	ENSMUSG00000026238	Ptma	Thym	prothymosin alpha	protein-coding
common_peak1-12382-13-7-0.778472030637769-0.817533494790411	chr17	66447886	66448481	+	0	NA	intron (NM_028388, intron 1 of 7)	intron (NM_028388, intron 1 of 7)	2716	NM_001278415	72900	Mm.2206	NM_028388	ENSMUSG00000024099	Ndufv2	2900010C23Rik	NADH dehydrogenase (ubiquinone) flavoprotein 2	protein-coding
common_peak2-20684-31-44--0.266614425516551-0.432554671146866	chr10	88731056	88732224	+	0	NA	Intergenic	GA-rich|Low_complexity|Low_complexity	-11105	NR_102339	320091	Mm.236464	NM_178773	ENSMUSG00000035189	Ano4	A330096O15Rik|Gm65|Tmem16d	anoctamin 4	protein-coding
unique_peak2-36675-4-7--1.02346051385325-1.09384600808989	chr3	30999951	31000298	+	0	NA	intron (NM_001039090, intron 2 of 6)	ID_B1|SINE|B4	6144	NM_001039090	20482	Mm.15406	NM_011386	ENSMUSG00000027660	Skil	Skir|SnoN|sno	SKI-like	protein-coding
common_peak2-19785-67-115--0.313569512344577-0.807261277699032	chr1	85793288	85794774	+	0	NA	Intergenic	Intergenic	-526890	NM_001037909	620078	Mm.386456	NM_175219	ENSMUSG00000052477	C130026I21Rik	4930565N07Rik|OTTMUSG00000029174	RIKEN cDNA C130026I21 gene	protein-coding
common_peak2-21292-20-35--0.681850216851119-0.950553505527076	chr11	70844563	70845689	+	0	NA	TTS (NM_134022)	TTS (NM_134022)	1993	NM_134022	103712	Mm.27768	NM_134022		6330403K07Rik	AI415455|AV161034|UGS148	RIKEN cDNA 6330403K07 gene	protein-coding
unique_peak2-39957-5-8--0.874305337448166-1.10484139239135	chrX	140529441	140529847	+	0	NA	Intergenic	Lx7|LINE|L1	-58594	NR_040271	319764	Mm.208482	NR_040271	ENSMUSG00000085139	A730046J19Rik	-	RIKEN cDNA A730046J19 gene	ncRNA
common_peak1-17664-10-9-0.0344872501214071-1.05503135781948	chr7	64286813	64287460	+	0	NA	intron (NM_008074, intron 3 of 9)	L1Md_F3|LINE|L1	355105	NM_008074	14407	Mm.434343	NM_008074		Gabrg3	B230362M20Rik|Gabrg-3	gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3	protein-coding
unique_peak1-5257-16-4-1.7963355473807-2.18192634393779	chr5	55505461	55506176	+	0	NA	Intergenic	Intergenic	764587	NR_038045	330086	Mm.254449	NM_177871		Gm10440	D130065D13|ENSMUSG00000072936	predicted gene 10440	ncRNA
common_peak1-13793-20-18-0.240147271147608-0.388034239052786	chr2	38925954	38926938	+	0	NA	3' UTR (NM_178778, exon 18 of 18)	3' UTR (NM_178778, exon 18 of 18)	-5385	NM_029793	76899	Mm.131098	NM_029793	ENSMUSG00000026754	Golga1	0710001G09Rik|2210418B03Rik|AW107649|Golgi97|golgin-97	golgi autoantigen, golgin subfamily a, 1	protein-coding
unique_peak2-37485-0-13--4.64748585253181-3.36932189928148	chr5	5292945	5293577	+	0	NA	intron (NM_011074, intron 2 of 14)	intron (NM_011074, intron 2 of 14)	86990	NM_011074	18647	Mm.389061	NM_011074	ENSMUSG00000028926	Cdk14	Pftk1|mKIAA0834	cyclin-dependent kinase 14	protein-coding
common_peak1-13754-36-78--0.824459662009349-2.24733288503568	chr2	33886904	33887960	+	0	NA	Intergenic	B4A|SINE|B4	-143966	NM_175184	72543	Mm.254914	NM_175184	ENSMUSG00000038740	Mvb12b	2610200O14Rik|2610528K11Rik|AI414895|Fam125b	multivesicular body subunit 12B	protein-coding
unique_peak2-39563-4-9--1.34538860874061-1.36011389749466	chr9	70888321	70888775	+	0	NA	Intergenic	Intergenic	-105933	NM_008280	15450	Mm.390187	NM_008280	ENSMUSG00000032207	Lipc	AI256194|HL|Hpl	lipase, hepatic	protein-coding
common_peak1-8616-12-17--0.521149016354673-0.417187467413082	chr10	116949776	116950362	+	0	NA	Intergenic	Intergenic	-116487	NM_027468	70574	Mm.339332	NM_027468	ENSMUSG00000020183	Cpm	1110060I01Rik|5730456K23Rik|AA589379|E030045M14Rik	carboxypeptidase M	protein-coding
common_peak1-16301-20-17-0.318149783148881-0.440610794044987	chr5	114100210	114101025	+	0	NA	promoter-TSS (NM_008153)	promoter-TSS (NM_008153)	-218	NM_008153	14747	Mm.5196	NM_008153	ENSMUSG00000042190	Cmklr1	ChemR23|DEZ|Gpcr27|mcmklr1	chemokine-like receptor 1	protein-coding
unique_peak1-2450-20-4-2.16614668970383-3.28004177908661	chr15	102396171	102397052	+	0	NA	intron (NM_146065, intron 2 of 10)	intron (NM_146065, intron 2 of 10)	-41238	NR_033409	54615	Mm.445915	NM_018787	ENSMUSG00000023052	Npff	-	neuropeptide FF-amide peptide precursor	protein-coding
common_peak2-29989-123-151-0.347895736563221-1.41732393923609	chr6	122701410	122704276	+	0	NA	Intergenic	MLT2C2|LTR|ERVL	-10080	NM_011401	20527	Mm.395108	NM_011401	ENSMUSG00000003153	Slc2a3	AA408729|AL023014|AL024341|AU040424|C78366|Glut-3|Glut3	solute carrier family 2 (facilitated glucose transporter), member 3	protein-coding
unique_peak2-35095-3-11--1.99894559068043-1.95434855131066	chr16	20536588	20537140	+	0	NA	intron (NM_009679, intron 1 of 10)	intron (NM_009679, intron 1 of 10)	1287	NM_009679	11773	Mm.18946	NM_009679	ENSMUSG00000022841	Ap2m1	-	adaptor-related protein complex 2, mu 1 subunit	protein-coding
unique_peak2-37056-1-14--3.53394760582526-3.64038867156802	chr3	138218094	138218682	+	0	NA	exon (NM_007917, exon 8 of 8)	exon (NM_007917, exon 8 of 8)	29003	NR_035481	100316706		NR_035481	miRBase:MI0009952	Mir1956	mmu-mir-1956	microRNA 1956	ncRNA
common_peak2-32074-15-11-0.4272022498345-0.503257505534083	chr9	95816595	95817164	+	0	NA	exon (NM_019864, exon 30 of 47)	exon (NM_019864, exon 30 of 47)	-38300	NM_011916	24127	Mm.291179	NM_011916	ENSMUSG00000032410	Xrn1	Dhm2|exo|mXrn1	5'-3' exoribonuclease 1	protein-coding
unique_peak1-1825-9-1-2.18961340640422-2.31132995230379	chr14	33343392	33343898	+	0	NA	intron (NM_001081221, intron 5 of 20)	intron (NM_001081221, intron 5 of 20)	16938	NM_001081221	319955	Mm.318310	NM_177043	ENSMUSG00000054051	Ercc6	4732403I04|C130058G22Rik|CSB	excision repair cross-complementing rodent repair deficiency, complementation group 6	protein-coding
unique_peak2-35599-5-6--0.511735258063458-0.947717972411649	chr17	79285704	79286070	+	0	NA	intron (NM_001163625, intron 6 of 6)	L1_Mus1|LINE|L1	-3975	NM_011163	19106	Mm.378990	NM_011163	ENSMUSG00000024079	Eif2ak2	2310047A08Rik|4732414G15Rik|AI467567|AI747578|Pkr|Prkr|Tik	eukaryotic translation initiation factor 2-alpha kinase 2	protein-coding
common_peak2-26429-23-21-0.262335885871783-0.416752705545949	chr2	62645676	62646334	+	0	NA	intron (NM_133207, intron 6 of 15)	intron (NM_133207, intron 6 of 15)	143621	NM_145523	227960	Mm.219877	NM_145523	ENSMUSG00000026893	Gca	5133401E04Rik|AI573844	grancalcin	protein-coding
common_peak1-9503-11-9-0.186765489364251-0.344532117358383	chr11	113265247	113265939	+	0	NA	intron (NM_027216, intron 5 of 9)	intron (NM_027216, intron 5 of 9)	161536	NM_001166503	69806	Mm.341021	NM_027216	ENSMUSG00000041654	Slc39a11	1810074D23Rik	solute carrier family 39 (metal ion transporter), member 11	protein-coding
unique_peak1-3176-20-5-1.90311228387004-2.81016724606745	chr18	41096618	41097517	+	0	NA	Intergenic	L1_Mus4|LINE|L1	679052	NM_026135	383348	Mm.76366	NM_026135	ENSMUSG00000051401	Kctd16	4930434H12Rik|Gm1267	potassium channel tetramerisation domain containing 16	protein-coding
unique_peak2-35639-4-7--1.02346051385325-1.09384600808989	chr17	88460013	88460439	+	0	NA	intron (NM_001081034, intron 1 of 22)	intron (NM_001081034, intron 1 of 22)	4399	NM_001081034	225055	Mm.386857	NM_001081034	ENSMUSG00000005371	Fbxo11	C80048|Jf	F-box protein 11	protein-coding
unique_peak1-1574-15-5-1.4272022498345-1.61682445937017	chr13	31530735	31531461	+	0	NA	Intergenic	B1F|SINE|Alu	-118941	NM_008239	15220	Mm.44235	NM_008239	ENSMUSG00000038415	Foxq1	HFH-1|Hfh1|Hfh1l|sa	forkhead box Q1	protein-coding
common_peak2-19654-13-6-0.971117108580164-1.01572999746118	chr1	51264772	51265271	+	0	NA	Intergenic	Intergenic	-80949	NM_138741	20324	Mm.398690	NM_138741	ENSMUSG00000045954	Sdpr	-	serum deprivation response	protein-coding
common_peak1-15179-22-23-0.0623216043662485-0.319130838712456	chr3	152477723	152478784	+	0	NA	Intergenic	Intergenic	101189	NM_025662	329777	Mm.331447	NM_025662	ENSMUSG00000039047	Pigk	3000001O05Rik	phosphatidylinositol glycan anchor biosynthesis, class K	protein-coding
unique_peak2-37604-1-5--2.2120195109379-1.32905871926422	chr5	63586630	63586983	+	0	NA	Intergenic	Intergenic	381744	NM_001170705	100322896	Mm.479821	NM_001170705	ENSMUSG00000090326	Dthd1	Gm17384	death domain containing 1	protein-coding
common_peak2-25300-33-27-0.523982640467925-0.852249209606516	chr18	73571604	73572398	+	0	NA	Intergenic	Intergenic	-160358	NM_001039214	240396	Mm.24131	NM_001039214	ENSMUSG00000037253	Mex3c	A130001D14Rik|BC035207|BM-013|Rkhd2	mex3 homolog C (C. elegans)	protein-coding
unique_peak1-5300-11-4-1.18676548936425-1.68134727924692	chr5	74126376	74127034	+	0	NA	Intergenic	Intergenic	84086	NM_178387	73472	Mm.87067	NM_178387	ENSMUSG00000029155	Spata18	1700067I02Rik	spermatogenesis associated 18	protein-coding
common_peak1-12254-20-25--0.212364933549899-0.342639663781856	chr17	36032063	36032693	+	0	NA	intron (NM_001033630, intron 2 of 5)	intron (NM_001033630, intron 2 of 5)	1945	NM_001033630	69662	Mm.260159	NM_001033630	ENSMUSG00000050705	2310061I04Rik	-	RIKEN cDNA 2310061I04 gene	protein-coding
common_peak2-31281-27-31--0.00845404910476422-0.304476922018591	chr8	72161321	72162143	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-12285	NM_172754	234362	Mm.458487	NM_172754	ENSMUSG00000060427	Zfp868	AI449175|AW108241|C530032E20|mszf62	zinc finger protein 868	protein-coding
common_peak1-14658-10-7-0.356415345008769-1.12966497611638	chr3	58202880	58203408	+	0	NA	Intergenic	Intergenic	-16467	NM_001081229	72033	Mm.218409	NM_028067	ENSMUSG00000027806	Tsc22d2	1810043J12Rik|5530402M19Rik	TSC22 domain family, member 2	protein-coding
unique_peak2-37785-1-6--2.43441193227435-1.56314192529759	chr5	118157284	118157691	+	0	NA	intron (NM_001114545, intron 13 of 19)	intron (NM_001114545, intron 13 of 19)	-159641	NM_008712	18125	Mm.44249	NM_008712	ENSMUSG00000029361	Nos1	2310005C01Rik|NO|NOS-I|Nos-1|bNOS|nNOS	nitric oxide synthase 1, neuronal	protein-coding
unique_peak2-33607-7-5-0.214128329577033-1.01466476204226	chr11	94498550	94499004	+	0	NA	intron (NM_133807, intron 4 of 6)	intron (NM_133807, intron 4 of 6)	7639	NM_133807	98238	Mm.172720	NM_133807	ENSMUSG00000020869	Lrrc59	AA959742|C78668	leucine rich repeat containing 59	protein-coding
common_peak2-24576-110-146-0.20232541554228-0.666024210332527	chr17	30003874	30005765	+	0	NA	intron (NM_001081160, intron 1 of 15)	intron (NM_001081160, intron 1 of 15)	20008	NM_001081160	74762	Mm.40901	NM_001081160	ENSMUSG00000043557	Mdga1	1200011I03Rik|GPIM|Mamdc3	MAM domain containing glycosylphosphatidylinositol anchor 1	protein-coding
common_peak1-12287-9-13--0.617741515653384-0.459837087125828	chr17	45573992	45574516	+	0	NA	Intergenic	MERVL_2A-int|LTR|ERVL	-3598	NM_152810	71702	Mm.28270	NM_152810	ENSMUSG00000023932	Cdc5l	1200002I02Rik|AA408004|PCDC5RP	cell division cycle 5-like (S. pombe)	protein-coding
common_peak1-13024-44-28-0.963911839440963-2.49326259230166	chr19	5433267	5434625	+	0	NA	Intergenic	Intergenic	8802	NM_001256515	107242	Mm.329658	NM_134149	ENSMUSG00000047423	AI837181	Bles03|N28173	expressed sequence AI837181	protein-coding
unique_peak1-1639-8-0-3.00522241794757-2.70926996097583	chr13	51859399	51859917	+	0	NA	intron (NM_001281880, intron 1 of 16)	intron (NM_001281880, intron 1 of 16)	29458	NM_001281880	20354	Mm.33903	NM_013660	ENSMUSG00000021451	Sema4d	CD100|Semacl2|Semaj|Semcl2|coll-4	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D	protein-coding
common_peak1-11029-20-40--0.869477220026891-1.45230360914611	chr15	39943093	39943992	+	0	NA	Intergenic	Intergenic	-22369	NM_001256056	328531	Mm.60703	NM_001256056		9330182O14Rik	-	RIKEN cDNA 9330182O14 gene	protein-coding
common_peak2-27626-14-20--0.493101262421116-0.456667090758524	chr3	105686755	105687422	+	0	NA	intron (NM_027025, intron 1 of 6)	Lx3C|LINE|L1	13312	NM_001174169	11542	Mm.235024	NM_009631	ENSMUSG00000000562	Adora3	1700001D09Rik|4930578J19Rik|A3AR|A3R|AA3R|ARA3|Gpcr2	adenosine A3 receptor	protein-coding
common_peak2-19858-11-9-0.186765489364251-0.344532117358383	chr1	91823080	91823661	+	0	NA	Intergenic	Intergenic	4381	NM_010262	14472	Mm.204730	NM_010262		Gbx2	D130058E05Rik|Gbx-2|MMoxA|Stra7	gastrulation brain homeobox 2	protein-coding
unique_peak1-2974-15-5-1.4272022498345-1.61682445937017	chr17	75174589	75175235	+	0	NA	intron (NM_152817, intron 10 of 19)	intron (NM_152817, intron 10 of 19)	57822	NM_152817	74196	Mm.209503	NM_152817	ENSMUSG00000024078	Ttc27	2610511O17Rik	tetratricopeptide repeat domain 27	protein-coding
common_peak1-7552-9-14--0.717277189204299-0.53895475198017	chr1	37997990	37998478	+	0	NA	Intergenic	Lx2B|LINE|L1	16370	NM_027111	69541	Mm.389117	NM_027111	ENSMUSG00000026085	Lyg1	2300002O18Rik	lysozyme G-like 1	protein-coding
common_peak1-10934-17-16-0.130833496954699-0.356936432242225	chr15	10818183	10818907	+	0	NA	Intergenic	Intergenic	59739	NR_040357	100502601	Mm.399434	NR_040357		Gm19276	-	predicted gene, 19276	ncRNA
unique_peak2-33953-8-18--1.24270509549601-1.15812782348128	chr12	78953371	78954130	+	0	NA	Intergenic	Intergenic	-373892	NM_172952	268566	Mm.341742	NM_145965	ENSMUSG00000047454	Gphn	5730552E08Rik|AI662856|BC027112|C230040D23|GPH|GPHRYN|geph	gephyrin	protein-coding
unique_peak2-35396-4-9--1.34538860874061-1.36011389749466	chr17	31970156	31970538	+	0	NA	Intergenic	Intergenic	22390	NM_010831	17691	Mm.290941	NM_010831	ENSMUSG00000024042	Sik1	Msk|Sik|Snf1lk	salt inducible kinase 1	protein-coding
common_peak2-23424-11-23--1.07626891646954-1.24082643394777	chr15	61608065	61608786	+	0	NA	Intergenic	Intergenic	-2419	NR_040350	432956	Mm.404918	NR_040350		D030024E09Rik	-	RIKEN cDNA D030024E09 gene	ncRNA
common_peak1-18910-8-1-2.00522241794757-2.05605744720049	chr9	41950074	41950602	+	0	NA	Intergenic	(GA)n|Simple_repeat|Simple_repeat	-17966	NM_011436	20660	Mm.121920	NM_011436		Sorl1	2900010L19Rik|AI596264|AW261561|LR11|SorLA|gp250|mSorLA	sortilin-related receptor, LDLR class A repeats-containing	protein-coding
unique_peak2-35280-7-21--1.66034078833911-1.89173646618541	chr17	5941331	5942075	+	0	NA	intron (NM_001113352, intron 1 of 25)	CpG	423	NM_001113352	20975	Mm.236068	NM_011523	ENSMUSG00000023805	Synj2	AI481647|SJ2|mKIAA0348	synaptojanin 2	protein-coding
common_peak1-12895-19-15-0.402687326661686-0.519193887192487	chr18	82475603	82476390	+	0	NA	Intergenic	Intergenic	100173	NM_008082	14427	Mm.6219	NM_008082	ENSMUSG00000024553	Galr1	Galnr1	galanin receptor 1	protein-coding
common_peak1-15548-84-97-0.320224214773817-0.922095462234909	chr4	122885685	122887227	+	0	NA	intron (NM_001085502, intron 3 of 5)	intron (NM_001085502, intron 3 of 5)	7660	NM_001085502	230718	Mm.354635	NM_001085502	ENSMUSG00000054958	Nt5c1a	Cn1a|Gm49	5'-nucleotidase, cytosolic IA	protein-coding
unique_peak2-35788-4-12--1.72390023199434-1.85743853830261	chr18	56432142	56432768	+	0	NA	Intergenic	Intergenic	-159331	NM_026240	107022	Mm.24356	NM_026240	ENSMUSG00000001700	Gramd3	9030613F08Rik|9130427A09Rik|AW061306|NS3TP2	GRAM domain containing 3	protein-coding
common_peak1-13955-46-65--0.146398176109652-0.344471032458745	chr2	91526429	91527382	+	0	NA	intron (NM_145528, intron 6 of 15)	B1_Mur3|SINE|Alu	23844	NM_145528	51897	Mm.28492	NM_145528	ENSMUSG00000027244	Atg13	1110053A20Rik|D2Ertd391e|Harbi1	autophagy related 13	protein-coding
common_peak2-30464-12-11-0.0638134843664826-0.337263207250336	chr7	45830375	45831020	+	0	NA	Intergenic	Intergenic	689207	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak2-27820-55-102--0.481880656030516-1.27244447704216	chr3	145648454	145650112	+	0	NA	Intergenic	Intergenic	-1551	NM_001166064	214804	Mm.268854	NM_001166064	ENSMUSG00000036863	Syde2	C430017H16Rik	synapse defective 1, Rho GTPase, homolog 2 (C. elegans)	protein-coding
common_peak2-22267-84-180--0.56491182819418-2.73494217404114	chr13	5861489	5864187	+	0	NA	intron (NM_011803, intron 1 of 3)	intron (NM_011803, intron 1 of 3)	2103	NM_011803	23849	Mm.275036	NM_011803	ENSMUSG00000000078	Klf6	AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9	Kruppel-like factor 6	protein-coding
common_peak1-17639-43-37-0.534635672080118-1.07072119362139	chr7	49599772	49601586	+	0	NA	Intergenic	MERVK26-int|LTR|ERVK	85060	NR_028441	628490	Mm.246518	NR_028441	ENSMUSG00000070621	Vmn2r-ps60	Casr-rs4|Gprc2a-rs4	vomeronasal 2, receptor, pseudogene 60	pseudo
common_peak1-15146-50-104--0.67330520118717-2.16117965707066	chr3	145117937	145119408	+	0	NA	intron (NM_027770, intron 33 of 59)	CT-rich|Low_complexity|Low_complexity	-120500	NM_001081094	229937	Mm.24586	NM_001081094	ENSMUSG00000074182	Znhit6	2410019A14Rik	zinc finger, HIT type 6	protein-coding
unique_peak1-3450-34-5-2.79710602628011-7.5321606872843	chr19	8518372	8519613	+	0	NA	Intergenic	Lx3C|LINE|L1	-39397	NM_177002	319800	Mm.426083	NM_177002	ENSMUSG00000052562	Slc22a30	AA986766|C730048C13Rik|UST1R	solute carrier family 22, member 30	protein-coding
common_peak2-30394-9-8-0.0196884049619079-1.03275496310833	chr7	31041919	31042455	+	0	NA	intron (NM_146186, intron 12 of 32)	L1MC4|LINE|L1	-20403	NM_001289817	381867	Mm.483986	NM_001289817		Ovol3	Gm1903|movo3	OVO homolog-like 3 (Drosophila)	protein-coding
unique_peak2-39857-4-5--0.608423014574403-0.909929411522249	chrX	72094723	72095094	+	0	NA	Intergenic	Intergenic	12373	NM_001081670	546325	Mm.436644	NM_001081670	ENSMUSG00000079531	Gm5936	EG546325	predicted gene 5936	protein-coding
common_peak2-28302-8-9--0.316705676939792-1.03275496310833	chr4	132639054	132639721	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-47161	NM_153423	242687	Mm.23566	NM_153423	ENSMUSG00000028868	Wasf2	AW742646|D4Ertd13e|WAVE2	WAS protein family, member 2	protein-coding
common_peak2-22769-88-116-0.145047689587128-0.450887642954521	chr14	101841076	101844726	+	0	NA	3' UTR (NM_001081278, exon 19 of 19)	3' UTR (NM_001081278, exon 19 of 19)	165507	NM_001081278	210789	Mm.320639	NM_173380	ENSMUSG00000033083	Tbc1d4	5930406J04Rik|A930035N22|AV295684|As160	TBC1 domain family, member 4	protein-coding
common_peak1-16270-42-51-0.0418896097260921-0.319645149473567	chr5	108131557	108132810	+	0	NA	intron (NR_045871, intron 1 of 2)	intron (NR_045871, intron 1 of 2)	316	NR_045871	654809	Mm.399159	NR_045871		4930428O21Rik	-	RIKEN cDNA 4930428O21 gene	ncRNA
unique_peak1-5170-7-0-2.79909083029819-2.40823996531185	chr5	28568162	28568682	+	0	NA	Intergenic	Intergenic	-4009	NM_175651	269637	Mm.68286	NM_175651	ENSMUSG00000044681	Cnpy1	1500012D20Rik|9630008K15Rik|AI853839	canopy 1 homolog (zebrafish)	protein-coding
unique_peak2-38959-2-7--1.91745425626332-1.45399745587252	chr8	32007632	32008028	+	0	NA	Intergenic	Intergenic	-192304	NM_025869	66959	Mm.23916	NM_025869	ENSMUSG00000039661	Dusp26	2310043K02Rik|Skrp3	dual specificity phosphatase 26 (putative)	protein-coding
common_peak1-18816-11-12--0.191746133889479-0.310474156842889	chr9	3335450	3335902	+	0	NA	intron (NM_026303, intron 1 of 11)	intron (NM_026303, intron 1 of 11)	445	NM_026303	67667	Mm.116968	NM_026303	ENSMUSG00000025899	Alkbh8	4930562C03Rik|8030431D03Rik|9430088N01Rik|Abh8	alkB, alkylation repair homolog 8 (E. coli)	protein-coding
unique_peak2-32826-8-7-0.00522241794757061-1.00793137938329	chr1	189769850	189770237	+	0	NA	intron (NM_001243792, intron 2 of 7)	intron (NM_001243792, intron 2 of 7)	-51663	NM_011935	26381	Mm.89989	NM_011935	ENSMUSG00000026610	Esrrg	ERR3|Errg|NR3B3|mKIAA0832	estrogen-related receptor gamma	protein-coding
unique_peak2-32524-2-8--2.08737925770563-1.65811743852845	chr1	60004039	60004431	+	0	NA	intron (NM_001037725, intron 1 of 7)	Lx2|LINE|L1	34385	NM_001037725	72750	Mm.258250	NM_001037725	ENSMUSG00000041040	Fam117b	2810425F24Rik|6330416D14Rik|Als2cr13	family with sequence similarity 117, member B	protein-coding
common_peak2-23029-21-26--0.185398236897233-0.318406410381916	chr14	65837277	65837992	+	0	NA	intron (NM_021458, intron 4 of 6)	intron (NM_021458, intron 4 of 6)	43666	NM_021458	14365	Mm.214687	NM_021458		Fzd3	AU020229|D930050A07Rik|Fz3	frizzled homolog 3 (Drosophila)	protein-coding
common_peak1-11760-7-20--1.59322659248057-1.71830443967823	chr16	38346898	38347412	+	0	NA	promoter-TSS (NM_001017429)	promoter-TSS (NM_001017429)	70	NM_001017429	12856	Mm.27396	NM_001017429	ENSMUSG00000046516	Cox17	AI037035	cytochrome c oxidase assembly protein 17	protein-coding
common_peak2-22685-14-11-0.314253659636488-0.435191258261915	chr13	98390894	98391483	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	61233	NR_046157	328314	Mm.138047	NR_046157		Gm5086	B230311A21|EG328314	predicted gene 5086	ncRNA
common_peak1-17856-75-52-1.01114653718009-4.51889462061216	chr7	113184741	113187371	+	0	NA	Intergenic	L1Md_T|LINE|L1	35322	NR_030720	668128	Mm.484022	NR_030720		Gm8989	EG668128|Gm21911	very large inducible GTPase 1 pseudogene	pseudo
unique_peak1-1771-11-3-1.50869358425161-1.95434855131066	chr13	113601227	113601767	+	0	NA	intron (NM_008903, intron 1 of 5)	intron (NM_008903, intron 1 of 5)	10512	NM_008247	19012	Mm.317186	NM_008247	ENSMUSG00000021759	Ppap2a	Hic53|Hpic53|LPP-1|LPP1|PAP-2a|PAP2-alpha|PAP2a|mPAP	phosphatidic acid phosphatase type 2A	protein-coding
unique_peak2-33898-8-7-0.00522241794757061-1.00793137938329	chr12	52097756	52098085	+	0	NA	Intergenic	Intergenic	-347710	NM_008858	18760	Mm.133719	NM_008858	ENSMUSG00000002688	Prkd1	PKD|PKD1|Pkcm|Prkcm	protein kinase D1	protein-coding
unique_peak1-4298-10-6-0.549060422951165-1.21398586181642	chr2	145934176	145934750	+	0	NA	Intergenic	MER102a|DNA|MER1_type	-113270	NM_016889	53626	Mm.379070	NM_016889	ENSMUSG00000068154	Insm1	IA-1	insulinoma-associated 1	protein-coding
common_peak1-10706-29-39--0.209638014272252-0.348003640999435	chr14	57889453	57890376	+	0	NA	Intergenic	Intergenic	127406	NM_030004	68631	Mm.25539	NM_030004	ENSMUSG00000021947	Cryl1	1110025H08Rik|A230106J09Rik|C85932|gul3dh	crystallin, lambda 1	protein-coding
common_peak1-10801-9-6-0.382258484346616-1.11707584880836	chr14	76876213	76876633	+	0	NA	intron (NM_207652, intron 1 of 2)	intron (NM_207652, intron 1 of 2)	-11820	NM_001177751	21807	Mm.153272	NM_009366	ENSMUSG00000022010	Tsc22d1	AA589566|AW105905|Egr5|TSC-22|Tgfb1i4|Tsc|Tsc22	TSC22 domain family, member 1	protein-coding
unique_peak2-36453-4-5--0.608423014574403-0.909929411522249	chr2	139724712	139725079	+	0	NA	intron (NM_001159641, intron 10 of 12)	L1Md_T|LINE|L1	167646	NM_001159640	75812	Mm.293449	NM_175225	ENSMUSG00000039033	Tasp1	4930485D02Rik|AW986064	taspase, threonine aspartase 1	protein-coding
unique_peak1-5308-6-5--0.0195643903408542-0.947717972411649	chr5	75826629	75827051	+	0	NA	Intergenic	L1ME1|LINE|L1	-144172	NM_001122733	16590	Mm.247073	NM_021099	ENSMUSG00000005672	Kit	Bs|CD117|Fdc|Gsfsco1|Gsfsco5|Gsfsow3|SCO1|SCO5|SOW3|Ssm|Tr-kit|W|c-KIT	kit oncogene	protein-coding
common_peak1-12327-45-63--0.139641974655128-0.345907904941242	chr17	48409872	48411030	+	0	NA	intron (NM_172623, intron 4 of 5)	B3|SINE|B2	6790	NM_001163796	224840	Mm.131234	NM_172623	ENSMUSG00000051682	Treml4	5031403H21Rik|BB137214|IDCP1|TLT-4|TLT4|Treml3	triggering receptor expressed on myeloid cells-like 4	protein-coding
unique_peak1-4431-8-1-2.00522241794757-2.05605744720049	chr2	168161881	168162376	+	0	NA	Intergenic	Intergenic	-67297	NM_001081134	241794	Mm.425102	NM_001081134	ENSMUSG00000074575	Kcng1	AW536275|OTTMUSG00000016048	potassium voltage-gated channel, subfamily G, member 1	protein-coding
unique_peak1-3587-9-3-1.18961340640422-1.57096726280955	chr19	29940336	29940656	+	0	NA	Intergenic	RMER20A|LTR|ERVK	-53032	NM_177721	240614	Mm.125503	NM_177721	ENSMUSG00000074909	Ranbp6	C630001B19	RAN binding protein 6	protein-coding
unique_peak1-5831-18-8-1.14299414978604-1.45476480588849	chr6	72373049	72373869	+	0	NA	intron (NM_019802, intron 5 of 14)	intron (NM_019802, intron 5 of 14)	9157	NM_019802	56316	Mm.19937	NM_019802	ENSMUSG00000053460	Ggcx	-	gamma-glutamyl carboxylase	protein-coding
common_peak1-14289-11-11--0.0762689164695427-0.301029995663976	chr2	157553146	157553892	+	0	NA	Intergenic	Intergenic	-9618	NM_025680	66642	Mm.45193	NM_025680	ENSMUSG00000027649	Ctnnbl1	5730471K09Rik|NAP|NYD-SP19|P14L	catenin, beta like 1	protein-coding
common_peak2-31008-27-45--0.532016005161777-0.779916249636879	chr8	10945415	10946351	+	0	NA	Intergenic	Intergenic	-17426	NR_030715	665306	Mm.358758	NR_030715	ENSMUSG00000038917	3930402G23Rik	-	RIKEN cDNA 3930402G23 gene	ncRNA
common_peak2-19696-21-32--0.474904854092218-0.550049347815239	chr1	60098242	60098903	+	0	NA	intron (NM_027407, intron 1 of 10)	intron (NM_027407, intron 1 of 10)	1359	NM_027407	70375	Mm.17834	NM_027407	ENSMUSG00000026018	Ica1l	1700030B17Rik|Als2cr15	islet cell autoantigen 1-like	protein-coding
common_peak1-19223-8-9--0.316705676939792-1.03275496310833	chr9	106886125	106886537	+	0	NA	intron (NM_153413, intron 22 of 52)	Lx9|LINE|L1	-92062	NM_029103	74840	Mm.29778	NM_029103	ENSMUSG00000032575	Manf	3230402M22Rik|AA407711|AA408789|AA673178|Armet|D17914|D18Mgi17	mesencephalic astrocyte-derived neurotrophic factor	protein-coding
common_peak1-9939-10-11--0.228547155712387-0.31137425193576	chr12	108711324	108711844	+	0	NA	Intergenic	Intergenic	262114	NR_045973	74968	Mm.359821	NR_045973	ENSMUSG00000085641	4930465M20Rik	4930431H15Rik	RIKEN cDNA 4930465M20 gene	ncRNA
common_peak2-20159-17-14-0.311405742596519-0.466170754204149	chr1	170175094	170175736	+	0	NA	intron (NM_001291508, intron 2 of 7)	(GAAA)n|Simple_repeat|Simple_repeat	186885	NM_001291508	18514	Mm.43358	NM_008783	ENSMUSG00000052534	Pbx1	2310056B04Rik|D230003C07Rik|Pbx-1	pre B cell leukemia homeobox 1	protein-coding
common_peak1-13102-73-82-0.317355575078297-0.819779479040504	chr19	8712305	8714042	+	0	NA	Intergenic	Intergenic	20687	NM_008766	18399	Mm.30090	NM_008766	ENSMUSG00000024650	Slc22a6	NKT|Oat1|Orctl1|mOat1	solute carrier family 22 (organic anion transporter), member 6	protein-coding
unique_peak2-36437-5-6--0.511735258063458-0.947717972411649	chr2	132098291	132098654	+	0	NA	intron (NM_138651, intron 1 of 12)	intron (NM_138651, intron 1 of 12)	9588	NM_138651	110911	Mm.284503	NM_138651	ENSMUSG00000058793	Cds2	5730450N06Rik|5730460C18Rik|AI854580|D2Wsu127e	CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2	protein-coding
common_peak1-8158-13-11-0.193509529916613-0.379391706698377	chr1	193387183	193387825	+	0	NA	intron (NM_029766, intron 5 of 14)	intron (NM_029766, intron 5 of 14)	11909	NM_029766	76843	Mm.189102	NM_029766	ENSMUSG00000037474	Dtl	2810047L02Rik|5730564G15Rik|Ramp	denticleless homolog (Drosophila)	protein-coding
common_peak1-13640-7-14--1.10779976531033-0.817533494790411	chr2	25621518	25621984	+	0	NA	intron (NM_010694, intron 2 of 6)	intron (NM_010694, intron 2 of 6)	662	NM_010694	16820	Mm.4632	NM_010694	ENSMUSG00000026936	Lcn3	Vnsp1	lipocalin 3	protein-coding
common_peak2-26051-13-13--0.0288828914198356-0.309074325783021	chr2	27328321	27328874	+	0	NA	intron (NM_001113574, intron 1 of 12)	intron (NM_001113574, intron 1 of 12)	2321	NM_023336	67382	Mm.28721	NM_023336	ENSMUSG00000026918	Brd3	2410084F24Rik|AW060456|Fsrg2|ORFX|RINGL3	bromodomain containing 3	protein-coding
common_peak2-21846-11-16--0.578769256998726-0.503257505534083	chr11	121228735	121229522	+	0	NA	intron (NM_139147, intron 1 of 5)	intron (NM_139147, intron 1 of 5)	-13367	NM_025793	66840	Mm.103986	NM_025793	ENSMUSG00000025173	Wdr45b	0610008N23Rik|AA408735|D16Bwg0193e|WIPI-3|Wdr45l	WD repeat domain 45B	protein-coding
common_peak1-13201-51-64-0.0525560125741187-0.315949812664558	chr19	21653121	21654193	+	0	NA	Intergenic	RMER1A|Other|Other	73624	NM_025423	66206	Mm.272430	NM_025423	ENSMUSG00000035171	1110059E24Rik	-	RIKEN cDNA 1110059E24 gene	protein-coding
common_peak2-32428-12-5-1.06381348436648-1.78669045979184	chrX	166971664	166972035	+	0	NA	Intergenic	Intergenic	-555000	NR_029457	654820	Mm.34441	NM_001039559	ENSMUSG00000072844	G530011O06Rik	-	RIKEN cDNA G530011O06 gene	ncRNA
common_peak1-15604-66-82-0.143444233078917-0.425896051280204	chr4	132260417	132262391	+	0	NA	intron (NM_210071, intron 12 of 16)	intron (NM_210071, intron 12 of 16)	27057	NM_201368	381560	Mm.44558	NM_201368	ENSMUSG00000037752	Xkr8	4931440N07Rik|AI597014|Gm1031|XRG8|mXkr8	X Kell blood group precursor related family member 8 homolog	protein-coding
common_peak1-14687-59-73-0.115910635243628-0.370598165309234	chr3	65658496	65659856	+	0	NA	Intergenic	MER47B|DNA|MER2_type	102971	NM_019937	56706	Mm.175612	NM_019937	ENSMUSG00000027829	Ccnl1	2610030E23Rik|AU018493|Ccnl|ania-6a	cyclin L1	protein-coding
common_peak2-25473-28-12-1.35251940168037-2.51395164919446	chr19	4496719	4497511	+	0	NA	3' UTR (NM_027237, exon 2 of 2)	3' UTR (NM_027237, exon 2 of 2)	1468	NM_027237	69861	Mm.282978	NM_027237	ENSMUSG00000042041	2010003K11Rik	-	RIKEN cDNA 2010003K11 gene	protein-coding
common_peak2-22481-11-5-0.923731083530457-1.477227296591	chr13	48982638	48982947	+	0	NA	intron (NM_001033268, intron 15 of 17)	intron (NM_001033268, intron 15 of 17)	-16538	NM_011078	18676	Mm.486213	NM_011078	ENSMUSG00000038025	Phf2	GRC5	PHD finger protein 2	protein-coding
unique_peak1-3506-11-2-1.92373108353046-2.32232533660526	chr19	16087720	16088241	+	0	NA	Intergenic	MTEb-int|LTR|MaLR	28415	NR_045355	100502653	Mm.149980	NR_045355	ENSMUSG00000097557	C130060C02Rik	-	RIKEN cDNA C130060C02 gene	ncRNA
unique_peak2-38724-4-7--1.02346051385325-1.09384600808989	chr7	112225158	112225804	+	0	NA	Intergenic	Intergenic	7498	NM_146758	258753	Mm.377675	NM_146758	ENSMUSG00000073913	Olfr678	MOR32-5	olfactory receptor 678	protein-coding
unique_peak2-38643-5-6--0.511735258063458-0.947717972411649	chr7	89664865	89665140	+	0	NA	intron (NM_001190374, intron 10 of 29)	MTC|LTR|MaLR	132036	NM_177894	330577	Mm.222812	NM_177894	ENSMUSG00000038570	Fam154b	1700129I04Rik|D030069K18	family with sequence similarity 154, member B	protein-coding
common_peak1-18483-19-33--0.684775514588653-0.884951936461256	chr8	84979388	84980210	+	0	NA	Intergenic	B1F|SINE|Alu	-53314	NM_008357	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak2-23197-12-6-0.841421063030034-1.58711810488664	chr15	83590782	83591233	+	0	NA	Intergenic	Intergenic	-19446	NM_172610	223726	Mm.36395	NM_172610	ENSMUSG00000041708	Mpped1	6230403M19|AW456965|D15Bwg0669e	metallophosphoesterase domain containing 1	protein-coding
common_peak2-27070-15-18--0.235762762887929-0.326591483156968	chr3	65928757	65929581	+	0	NA	intron (NM_145820, intron 10 of 13)	intron (NM_145820, intron 10 of 13)	-94640	NM_008987	19288	Mm.276776	NM_008987	ENSMUSG00000027832	Ptx3	AI607804|TSG-14	pentraxin related gene	protein-coding
unique_peak2-38087-9-9--0.132314688483142-1.03275496310833	chr6	54595155	54595666	+	0	NA	3' UTR (NM_001164361, exon 14 of 14)	3' UTR (NM_001164361, exon 14 of 14)	-36208	NM_001289741	68235	Mm.233860	NM_026629	ENSMUSG00000038065	Mturn	2410066E13Rik|AI448550|B230212L03Rik	maturin, neural progenitor differentiation regulator homolog (Xenopus)	protein-coding
common_peak1-19302-36-59--0.427569509440764-0.711514064421841	chr9	121719053	121719994	+	0	NA	intron (NM_028384, intron 10 of 15)	intron (NM_028384, intron 10 of 15)	-17898	NM_029095	74770	Mm.44195	NM_029095	ENSMUSG00000032523	Hhatl	1110011D13Rik|Gup1	hedgehog acyltransferase-like	protein-coding
common_peak2-27747-12-10-0.189344366450341-0.386243247519795	chr3	126922904	126923486	+	0	NA	Intergenic	B3|SINE|B2	58972	NR_105029	100862268	Mm.444603	NR_105029	ENSMUSG00000097456	LOC100862268	-	uncharacterized LOC100862268	ncRNA
common_peak2-22050-11-9-0.186765489364251-0.344532117358383	chr12	69515722	69516154	+	0	NA	Intergenic	Intergenic	744235	NM_009093	20090	Mm.379006	NM_009093	ENSMUSG00000034892	Rps29	-	ribosomal protein S29	protein-coding
unique_peak1-4949-14-3-1.89921616035764-2.80787975886178	chr4	96591001	96591589	+	0	NA	Intergenic	Intergenic	-139444	NM_001081284	620779	Mm.439625	NM_001081284	ENSMUSG00000078639	Gm12695	OTTMUSG00000008003	predicted gene 12695	protein-coding
common_peak2-21691-17-17-0.0483713367627256-0.325169893479371	chr11	105952802	105953468	+	0	NA	intron (NM_011947, intron 1 of 15)	intron (NM_011947, intron 1 of 15)	6919	NM_011947	26406	Mm.27041	NM_011947	ENSMUSG00000020700	Map3k3	AW548911|MAPKKK3|Mekk3|mKIAA4031	mitogen-activated protein kinase kinase kinase 3	protein-coding
common_peak1-18368-47-89--0.557011671563127-1.44267101396302	chr8	70509630	70511183	+	0	NA	Intergenic	Intergenic	-11933	NM_177698	234353	Mm.32525	NM_027626	ENSMUSG00000030465	Psd3	4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D	pleckstrin and Sec7 domain containing 3	protein-coding
common_peak1-16149-72-79-0.346655717984955-0.937394891182587	chr5	75043574	75045153	+	0	NA	intron (NM_001159577, intron 2 of 10)	Tigger5|DNA|MER2_type	29534	NM_010727	16924	Mm.440403	NM_010727	ENSMUSG00000029228	Lnx1	Lnx	ligand of numb-protein X 1	protein-coding
common_peak1-17521-14-19--0.422711934529718-0.403453972741636	chr7	28277546	28278200	+	0	NA	Intergenic	PB1D10|SINE|Alu	5901	NM_018820	55942	Mm.153684	NM_018820	ENSMUSG00000008384	Sertad1	1110032C13Rik|AV000455|AW456625|Sei-1|Sei1|TRIP-Br1	SERTA domain containing 1	protein-coding
common_peak2-26039-52-48-0.493550146150491-1.12396031894769	chr2	103284681	103286422	+	0	NA	intron (NM_010125, intron 4 of 6)	intron (NM_010125, intron 4 of 6)	21326	NM_010125	13711	Mm.20888	NM_010125	ENSMUSG00000027186	Elf5	ESE-2|ESE-5|ESE-5.	E74-like factor 5	protein-coding
common_peak1-18844-11-33--1.57876925699873-2.80071159219767	chr9	15709547	15710061	+	0	NA	Intergenic	Intergenic	-30804	NM_145712	244701	Mm.222631	NM_145712	ENSMUSG00000050901	Mtnr1b	Mel-1B-R|Mel1b|Mt2	melatonin receptor 1B	protein-coding
unique_peak1-3545-9-0-3.18961340640422-3.01029995663981	chr19	23997120	23997757	+	0	NA	intron (NM_177034, intron 5 of 12)	intron (NM_177034, intron 5 of 12)	108071	NM_001114174	381217	Mm.426078	NM_001114174	ENSMUSG00000071604	Fam189a2	AI414343|AI666772|Gm967	family with sequence similarity 189, member A2	protein-coding
unique_peak2-37186-5-6--0.511735258063458-0.947717972411649	chr4	56638253	56638590	+	0	NA	Intergenic	Lx3C|LINE|L1	115876	NM_025271	11471	Mm.251434	NM_025271	ENSMUSG00000070980	Actl7b	Tact1	actin-like 7b	protein-coding
common_peak2-24666-12-14--0.25811461052088-0.309074325783021	chr17	36002148	36002774	+	0	NA	promoter-TSS (NM_001146711)	promoter-TSS (NM_001146711)	-79	NM_001146711	76448	Mm.359982	NM_175242	ENSMUSG00000034595	Ppp1r18	2310014H01Rik|AA407849|AI450394	protein phosphatase 1, regulatory subunit 18	protein-coding
common_peak2-21236-13-12-0.0780323124966764-0.334470287753051	chr11	67861308	67861995	+	0	NA	intron (NM_018768, intron 6 of 7)	intron (NM_018768, intron 6 of 7)	81666	NM_018768	55943	Mm.3973	NM_018768	ENSMUSG00000020903	Stx8	0610007H08Rik|1110002H11Rik|4930571E13Rik|CARB	syntaxin 8	protein-coding
common_peak2-19743-50-98--0.588416303600657-1.66561336836221	chr1	74391486	74392546	+	0	NA	intron (NM_019999, intron 1 of 8)	intron (NM_019999, intron 1 of 8)	12832	NM_019999	56695	Mm.384726	NM_019999	ENSMUSG00000026179	Pnkd	2210013N15Rik|2810403H05Rik|AI854243|Brp17|MNCb-5687|MR-1|Tahccp2	paroxysmal nonkinesiogenic dyskinesia	protein-coding
common_peak2-28418-44-32-0.777498715210082-1.84665509793009	chr4	141570324	141571680	+	0	NA	Intergenic	Intergenic	-3436	NM_177868	329977	Mm.252019	NM_028429	ENSMUSG00000051435	Fhad1	2900090M10Rik|B230311F11	forkhead-associated (FHA) phosphopeptide binding domain 1	protein-coding
unique_peak1-1395-9-1-2.18961340640422-2.31132995230379	chr12	69540487	69540968	+	0	NA	Intergenic	L1Md_T|LINE|L1	719446	NM_009093	20090	Mm.379006	NM_009093	ENSMUSG00000034892	Rps29	-	ribosomal protein S29	protein-coding
common_peak1-7939-27-30-0.0373496405083609-0.315041925765932	chr1	152766611	152767522	+	0	NA	intron (NM_001024720, intron 1 of 106)	intron (NM_001024720, intron 1 of 106)	73499	NM_001024720	545370	Mm.379425	NM_001024720	ENSMUSG00000066842	Hmcn1	EG545370|Gm201	hemicentin 1	protein-coding
common_peak1-11709-14-28--0.958764834769927-1.16796998271031	chr16	32246657	32247162	+	0	NA	promoter-TSS (NM_001185162)	promoter-TSS (NM_001185162)	202	NM_173439	268882	Mm.256137	NM_173439	ENSMUSG00000035764	Fbxo45	2610017J04Rik|AI463119|BC026799	F-box protein 45	protein-coding
unique_peak2-34452-6-6--0.241956811677302-0.947717972411649	chr14	25472970	25473382	+	0	NA	Intergenic	B4A|SINE|B4	163273	NM_011297	20088	Mm.16775	NM_011297	ENSMUSG00000025290	Rps24	-	ribosomal protein S24	protein-coding
unique_peak1-3807-9-3-1.18961340640422-1.57096726280955	chr2	24379085	24379712	+	0	NA	Intergenic	Intergenic	-48279	NM_011040	18510	Mm.2533	NM_011040	ENSMUSG00000026976	Pax8	Pax-8	paired box 8	protein-coding
common_peak1-13696-34-17-1.21214352555895-2.67563291309484	chr2	30258326	30259499	+	0	NA	intron (NM_007760, intron 13 of 13)	B3A|SINE|B2	11138	NM_001290508	57170	Mm.285167	NM_020329	ENSMUSG00000026856	Dolpp1	0610011H20Rik|AB030189|LSFR2	dolichyl pyrophosphate phosphatase 1	protein-coding
common_peak1-9418-13-13--0.0288828914198356-0.309074325783021	chr11	101225699	101226260	+	0	NA	Intergenic	Intergenic	-3065	NM_008061	14377	Mm.18064	NM_008061	ENSMUSG00000078650	G6pc	AW107337|G6Pase|G6pt|Glc-6-Pase	glucose-6-phosphatase, catalytic	protein-coding
common_peak2-27105-8-32--2.03917170141088-3.64934937127727	chr3	7366342	7367148	+	0	NA	5' UTR (NM_008862, exon 1 of 3)	5' UTR (NM_008862, exon 1 of 3)	141	NM_008862	18767	Mm.3193	NM_008862	ENSMUSG00000027499	Pkia	AI415001|PKIalpha	protein kinase inhibitor, alpha	protein-coding
unique_peak2-35042-5-10--1.16381195464315-1.33892459842472	chr16	4420544	4420928	+	0	NA	promoter-TSS (NM_009624)	promoter-TSS (NM_009624)	-238	NM_009624	11515	Mm.439750	NM_009624	ENSMUSG00000005580	Adcy9	ACtp10|AW125421|D16Wsu65e|mKIAA0520	adenylate cyclase 9	protein-coding
common_peak2-30575-7-6--0.00826409175941478-0.97990265578305	chr7	80057795	80058240	+	0	NA	Intergenic	Intergenic	188937	NR_046024	625243	Mm.261798	NR_046024		Gm6567	-	predicted gene 6567	ncRNA
common_peak2-25255-21-14-0.662598669657717-0.879255460030357	chr18	65800075	65800528	+	0	NA	intron (NM_207255, intron 3 of 5)	B1_Mur1|SINE|Alu	-57621	NM_177028	319888	Mm.183576	NM_177028	ENSMUSG00000046610	Oacyl	5330437I02Rik|Acyl3	O-acyltransferase like	protein-coding
common_peak1-15340-16-10-0.658832023630764-0.699649909729472	chr4	49631711	49632498	+	0	NA	Intergenic	RLTR19-int|LTR|ERVK	-12828	NM_001163263	109331	Mm.24765	NM_182999	ENSMUSG00000028309	Rnf20	4833430L21Rik|AW540162|C79397|mKIAA4116	ring finger protein 20	protein-coding
common_peak2-32106-11-13--0.298661337805991-0.337263207250336	chr9	99702276	99702962	+	0	NA	Intergenic	Intergenic	73970	NM_011440	20669	Mm.261595	NM_011440	ENSMUSG00000053747	Sox14	-	SRY (sex determining region Y)-box 14	protein-coding
common_peak1-8438-43-51-0.082123467382611-0.333814721158537	chr10	78412194	78413171	+	0	NA	Intergenic	Lx4A|LINE|L1	-5270	NM_207201	18372	Mm.391567	NM_207201	ENSMUSG00000094080	Olfr8	GA_x5J8B7TNKDU-1250-1574|MOR139-5P	olfactory receptor 8	protein-coding
unique_peak2-38456-1-6--2.43441193227435-1.56314192529759	chr7	28574067	28574451	+	0	NA	Intergenic	Intergenic	23567	NR_033484	100043229	Mm.458666	NR_033484		Gm10046	ENSMUSG00000058661	predicted gene 10046	ncRNA
common_peak2-20668-13-12-0.0780323124966764-0.334470287753051	chr10	84622191	84622777	+	0	NA	intron (NM_007771, intron 1 of 12)	intron (NM_007771, intron 1 of 12)	25315	NM_007771	12952	Mm.26237	NM_007771	ENSMUSG00000020038	Cry1	AU020726|AU021000|Phll1	cryptochrome 1 (photolyase-like)	protein-coding
common_peak1-7985-21-29--0.337401330342283-0.403610417161439	chr1	160906437	160907252	+	0	NA	Intergenic	MuLV-int|LTR|ERV1	-19275	NM_001085376	23850	Mm.458621	NM_001085376	ENSMUSG00000073530	Pappa2	PAPP-A2|PLAC3|Pappe	pappalysin 2	protein-coding
unique_peak1-1048-8-4-0.683294323060208-1.21878474469819	chr11	78697678	78698002	+	0	NA	Intergenic	B4|SINE|B4	-36521	NM_010927	18126	Mm.2893	NM_010927	ENSMUSG00000020826	Nos2	NOS-II|Nos-2|Nos2a|i-NOS|iNOS	nitric oxide synthase 2, inducible	protein-coding
common_peak2-23270-22-39--0.674643989799958-0.97145127402441	chr15	25915288	25916408	+	0	NA	intron (NM_144523, intron 1 of 5)	intron (NM_144523, intron 1 of 5)	1727	NM_144523	52521	Mm.29145	NM_144523	ENSMUSG00000052253	Zfp622	1110033B05Rik|D15Ertd806e|ZPR9|Znf622	zinc finger protein 622	protein-coding
common_peak2-26447-33-38-0.0459353436632801-0.312166972154323	chr2	71211648	71212605	+	0	NA	Intergenic	Intergenic	-6515	NM_172436	78830	Mm.30928	NM_172436		Slc25a12	2610002D09Rik|AI839531|B230107K20Rik|BB129864	solute carrier family 25 (mitochondrial carrier, Aralar), member 12	protein-coding
common_peak2-24178-32-50--0.393333322751835-0.597008909195482	chr16	49855088	49856466	+	0	NA	promoter-TSS (NM_010581)	promoter-TSS (NM_010581)	10	NM_010581	16423	Mm.31752	NM_010581	ENSMUSG00000055447	Cd47	9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp	CD47 antigen (Rh-related antigen, integrin-associated signal transducer)	protein-coding
common_peak1-17993-11-6-0.701338662194009-1.32595962126035	chr7	139267087	139267617	+	0	NA	intron (NM_018867, intron 6 of 13)	intron (NM_018867, intron 6 of 13)	79072	NM_018867	55987	Mm.471654	NM_018867	ENSMUSG00000030862	Cpxm2	4632435C11Rik|CPX-2|Cpx2	carboxypeptidase X 2 (M14 family)	protein-coding
unique_peak2-34433-16-16-0.0308008010177225-0.307611222530525	chr14	20845491	20846475	+	0	NA	Intergenic	Intergenic	-49512	NM_001285909	14702	Mm.41737	NM_010315	ENSMUSG00000043004	Gng2	82	guanine nucleotide binding protein (G protein), gamma 2	protein-coding
common_peak2-23683-31-46--0.329350180864514-0.513362016391488	chr15	85969721	85970835	+	0	NA	3' UTR (NM_145475, exon 13 of 13)	3' UTR (NM_145475, exon 13 of 13)	46293	NM_145475	223753	Mm.222685	NM_145475	ENSMUSG00000035891	Cerk	AI848610|D330016D08Rik|mKIAA1646	ceramide kinase	protein-coding
common_peak1-15443-11-40--1.84885842036647-4.10519998339124	chr4	95051792	95052429	+	0	NA	Intergenic	RLTR42-int|LTR|ERVK	-172088	NM_001113412	75578	Mm.276098	NM_029347	ENSMUSG00000028573	Fggy	2310009E04Rik	FGGY carbohydrate kinase domain containing	protein-coding
unique_peak2-39885-10-12--0.344024373132323-0.340565874754526	chrX	75130396	75130889	+	0	NA	Intergenic	L1Md_T|LINE|L1	20545	NM_001085544	628923	Mm.79600	NM_001085544	ENSMUSG00000079522	Gm14744	OTTMUSG00000017866|Obp1f	predicted gene 14744	protein-coding
common_peak1-13940-29-33-0.0248272393647717-0.313805205020552	chr2	90745430	90746349	+	0	NA	exon (NM_025991, exon 2 of 4)	exon (NM_025991, exon 2 of 4)	946	NM_025991	67136	Mm.330394	NM_025991	ENSMUSG00000005505	Kbtbd4	2510026C23Rik	kelch repeat and BTB (POZ) domain containing 4	protein-coding
common_peak1-15812-32-21-0.819660400582363-1.49187957593	chr5	65453984	65455058	+	0	NA	Intergenic	Intergenic	-67949	NM_175174	71778	Mm.10281	NM_175174	ENSMUSG00000054920	Klhl5	1300013C10Rik	kelch-like 5	protein-coding
common_peak1-14824-46-17-1.72807094180649-5.8272605099587	chr3	90597756	90599541	+	0	NA	Intergenic	Intergenic	67820	NM_207263	384997	Mm.316644	NM_207263	ENSMUSG00000042250	Pglyrp4	Gm1478|Gm413	peptidoglycan recognition protein 4	protein-coding
common_peak1-12242-19-14-0.495796731053168-0.607095980551316	chr17	35666900	35667525	+	0	NA	exon (NM_146248, exon 16 of 18)	exon (NM_146248, exon 16 of 18)	-2934	NM_020576	57390	Mm.34201	NM_020576	ENSMUSG00000024409	Psors1c2	AI448740|Pcg|SPR1	psoriasis susceptibility 1 candidate 2 (human)	protein-coding
unique_peak1-7148-21-3-2.56948926526624-4.33845181153635	chr9	57600352	57601353	+	0	NA	intron (NM_007713, intron 9 of 12)	B2_Mm2|SINE|B2	12815	NM_007713	102414	Mm.25720	NM_007713	ENSMUSG00000032316	Clk3	AI256811	CDC-like kinase 3	protein-coding
unique_peak1-147-11-7-0.508693584251613-1.21681515183528	chr1	71754776	71755290	+	0	NA	Intergenic	MLT1G3|LTR|MaLR	55124	NR_040308	100042814	Mm.405775	NR_040308	ENSMUSG00000073652	Apol7d	ENSMUSG00000073652|Gm15456|OTTMUSG00000022136	apolipoprotein L 7d	ncRNA
common_peak2-28947-71-102--0.0420563484632472-0.305330011285694	chr5	99978081	99979795	+	0	NA	intron (NR_030692, intron 2 of 3)	(TA)n|Simple_repeat|Simple_repeat	179141	NR_030692	319818	Mm.295233	NR_030692	ENSMUSG00000089809	A930011G23Rik	-	RIKEN cDNA A930011G23 gene	ncRNA
common_peak2-29219-22-28--0.210696890040167-0.337923771396236	chr5	137600287	137601151	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-8642	NM_201373	384309	Mm.100647	NM_201373		Trim56	A130009K11Rik|Gm452|RNF109	tripartite motif-containing 56	protein-coding
common_peak2-21170-19-27--0.404667595395917-0.464317215211849	chr11	59600220	59601019	+	0	NA	non-coding (NR_110894, exon 1 of 2)	non-coding (NR_110894, exon 1 of 2)	105	NR_110894	194908	Mm.344651	NM_183139		Pld6	4933433K01Rik|Gm10|Zuc|mZuc|mitoPLD	phospholipase D family, member 6	protein-coding
unique_peak1-6174-9-2-1.60465090568306-1.87199725847353	chr6	145681888	145682400	+	0	NA	Intergenic	Intergenic	-74759	NM_027760	71323	Mm.158669	NM_027760	ENSMUSG00000030259	Rassf8	5133400D11Rik|AA815821|AW123240|Hoj1|mHoj-1	Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	protein-coding
unique_peak1-1680-13-5-1.19350952991661-1.95509489018123	chr13	72715894	72716516	+	0	NA	Intergenic	(TTTCC)n|Simple_repeat|Simple_repeat	49807	NR_030701	328287	Mm.235072	NR_030701		Gm20554	D430050G20	predicted gene, 20554	ncRNA
unique_peak1-7247-8-0-3.00522241794757-2.70926996097583	chr9	78213302	78213852	+	0	NA	Intergenic	Intergenic	2429	NM_025274	434423	Mm.139314	NM_025274	ENSMUSG00000060461	Dppa5a	AA536857|Dppa5|Esg1|ecat2	developmental pluripotency associated 5A	protein-coding
common_peak2-32386-27-13-1.18419102883763-2.09887956687855	chrX	126773462	126773887	+	0	NA	intron (NM_172493, intron 23 of 26)	intron (NM_172493, intron 23 of 26)	489396	NM_172493	54004	Mm.10763	NM_017398	ENSMUSG00000034480	Diap2	Dia3|Diaph2|Drf2|E430022I22Rik	diaphanous homolog 2 (Drosophila)	protein-coding
unique_peak1-6490-7-1-1.79909083029819-1.80617997398389	chr7	112788053	112788522	+	0	NA	promoter-TSS (NM_019502)	promoter-TSS (NM_019502)	643	NM_029802	76932	Mm.41637	NM_029802	ENSMUSG00000030881	Arfip2	2310002N04Rik|POR|Por1	ADP-ribosylation factor interacting protein 2	protein-coding
common_peak2-20143-27-23-0.40658345017408-0.622271369641148	chr1	167308044	167308696	+	0	NA	intron (NM_028759, intron 10 of 18)	L1_Mus4|LINE|L1	82224	NM_028759	74106	Mm.227605	NM_028759	ENSMUSG00000026571	Dcaf6	1200006M05Rik|Iqwd1|PC326	DDB1 and CUL4 associated factor 6	protein-coding
common_peak1-14521-41-63--0.29885129515134-0.529856340941694	chr3	27709632	27711205	+	0	NA	Intergenic	Intergenic	84872	NM_001164437	208613	Mm.59189	NM_001164437	ENSMUSG00000043164	Tmem212	E030011K20Rik|Gm564	transmembrane protein 212	protein-coding
common_peak2-32173-8-8--0.164702583494742-1.00793137938329	chr9	111148395	111148895	+	0	NA	intron (NM_026810, intron 11 of 18)	ID_B1|SINE|B4	25467	NM_026810	17350	Mm.486383	NM_026810	ENSMUSG00000032498	Mlh1	1110035C23Rik|AI317206|AI325952|AI561766	mutL homolog 1 (E. coli)	protein-coding
unique_peak2-36137-9-11--0.395349094316936-0.344532117358383	chr2	15048952	15049342	+	0	NA	Intergenic	Intergenic	72158	NM_029466	75869	Mm.174068	NM_029466		Arl5b	4930587A11Rik|AW146430|Arl8	ADP-ribosylation factor-like 5B	protein-coding
unique_peak2-33718-5-6--0.511735258063458-0.947717972411649	chr11	113729209	113729765	+	0	NA	intron (NM_172800, intron 10 of 44)	intron (NM_172800, intron 10 of 44)	-116358	NM_001163346	56699	Mm.293378	NM_020006	ENSMUSG00000041598	Cdc42ep4	1500041M20Rik|Borg4|CEP4	CDC42 effector protein (Rho GTPase binding) 4	protein-coding
unique_peak2-34669-5-12--1.40482005414695-1.62698961692433	chr15	5115904	5116436	+	0	NA	intron (NM_001013367, intron 3 of 8)	HAL1|LINE|L1	-19390	NM_026213	67515	Mm.254979	NM_026213	ENSMUSG00000022151	Ttc33	2410099M07Rik|2900001O04Rik|AI507072|AW538342|Osrf	tetratricopeptide repeat domain 33	protein-coding
common_peak2-32167-12-16--0.4386868561627-0.368541233333383	chr9	110656432	110656867	+	0	NA	Intergenic	Intergenic	-7000	NM_011199	19228	Mm.3542	NM_011199	ENSMUSG00000032492	Pth1r	PPR|Pthr|Pthr1	parathyroid hormone 1 receptor	protein-coding
unique_peak1-6264-7-7--0.200909169701811-0.97990265578305	chr7	24366450	24366963	+	0	NA	Intergenic	L1Md_F|LINE|L1	4502	NM_001166843	100043103	Mm.480300	NM_001166843	ENSMUSG00000094602	Vmn1r169	Gm4232	vomeronasal 1 receptor 169	protein-coding
common_peak1-8775-29-10-1.65285846197781-3.49519823291232	chr11	8467978	8468917	+	0	NA	intron (NM_001083587, intron 4 of 30)	Lx8|LINE|L1	96091	NM_001083587	319939	Mm.337820	NM_001083587	ENSMUSG00000020422	Tns3	BC023928|F830010I22Rik|TEM6|Tens1	tensin 3	protein-coding
common_peak1-19466-20-26--0.266812717572275-0.373496418836697	chrX	113184921	113185603	+	0	NA	Intergenic	Intergenic	-377291	NM_001033471	382239	Mm.336224	NM_001033471	ENSMUSG00000072995	Cpxcr1	Gm1143	CPX chromosome region, candidate 1	protein-coding
common_peak2-30789-30-52--0.558245045071326-0.936258361511353	chr7	127026197	127027952	+	0	NA	intron (NM_001163703, intron 1 of 2)	B1_Mus1|SINE|Alu	11898	NM_173408	233805	Mm.31539	NM_173408	ENSMUSG00000048787	Dcun1d3	1700020A13Rik|BC030335	DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)	protein-coding
common_peak2-29207-15-18--0.235762762887929-0.326591483156968	chr5	137072268	137073185	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	-29366	NM_001291238	13047	Mm.320317	NM_009986	ENSMUSG00000029705	Cux1	CDP|Cutl1|Cux|Cux-1	cut-like homeobox 1	protein-coding
unique_peak2-38842-6-6--0.241956811677302-0.947717972411649	chr7	143068663	143068992	+	0	NA	Intergenic	Intergenic	-160765	NM_001081117	17345	Mm.4078	NM_001081117	ENSMUSG00000031004	Mki67	D630048A14Rik|Ki-67|Ki67	antigen identified by monoclonal antibody Ki 67	protein-coding
common_peak1-8758-11-15--0.491306415748387-0.435191258261915	chr11	5444339	5444939	+	0	NA	Intergenic	RLTR13B1|LTR|ERVK	-2419	NM_134033	104479	Mm.210403	NM_134033	ENSMUSG00000020482	Ccdc117	1110004K02Rik|1700026O03Rik|AU018638|AU042822|AV173073|BC018601	coiled-coil domain containing 117	protein-coding
unique_peak1-5331-10-1-2.35641534500877-2.57096726280955	chr5	81473626	81474141	+	0	NA	intron (NM_198702, intron 1 of 27)	L1MA5|LINE|L1	23265	NM_198702	319387	Mm.273631	NM_198702	ENSMUSG00000037605	Lphn3	5430402I23Rik|CIRL-3|D130075K09Rik|Gm1379|LEC3|mKIAA0768	latrophilin 3	protein-coding
common_peak1-9167-71-85-0.218179424017873-0.565418124657885	chr11	78164665	78167169	+	0	NA	Intergenic	Intergenic	8893	NM_011676	22248	Mm.284811	NM_011676	ENSMUSG00000002058	Unc119	D11Bhm52|HRG4|MRG4|Rg4|Rtg4|Unc119h	unc-119 homolog (C. elegans)	protein-coding
common_peak1-17554-13-11-0.193509529916613-0.379391706698377	chr7	30280403	30281061	+	0	NA	intron (NM_001081028, intron 2 of 22)	B1_Mur4|SINE|Alu	9747	NM_001081028	74206	Mm.447042	NM_001081028	ENSMUSG00000030583	Sipa1l3	2610511M17Rik	signal-induced proliferation-associated 1 like 3	protein-coding
unique_peak2-38841-3-7--1.41398308995928-1.23214870625617	chr7	143062490	143062989	+	0	NA	Intergenic	ORR1E|LTR|MaLR	-154677	NM_001081117	17345	Mm.4078	NM_001081117	ENSMUSG00000031004	Mki67	D630048A14Rik|Ki-67|Ki67	antigen identified by monoclonal antibody Ki 67	protein-coding
common_peak1-10615-21-24--0.0743669245084888-0.301029995663979	chr14	33340075	33340989	+	0	NA	intron (NM_001081221, intron 5 of 20)	intron (NM_001081221, intron 5 of 20)	13825	NM_001081221	319955	Mm.318310	NM_177043	ENSMUSG00000054051	Ercc6	4732403I04|C130058G22Rik|CSB	excision repair cross-complementing rodent repair deficiency, complementation group 6	protein-coding
common_peak2-25031-23-11-1.13680500378792-1.66030262873422	chr18	25540834	25541355	+	0	NA	intron (NM_001033532, intron 8 of 10)	intron (NM_001033532, intron 8 of 10)	213573	NM_001033532	225289	Mm.391081	NM_001033532	ENSMUSG00000033632	AW554918	4921538P22|AI461742|Kiaa1328|mKIAA1328	expressed sequence AW554918	protein-coding
unique_peak2-38900-4-10--1.48289213249054-1.5150158574804	chr8	11558446	11558836	+	0	NA	intron (NM_011919, intron 1 of 1)	CpG	2575	NM_011919	26356	Mm.25709	NM_011919	ENSMUSG00000045969	Ing1	2610028J21Rik|AA407184|AI875420|mING1h|p33Ing1|p37Ing1b	inhibitor of growth family, member 1	protein-coding
unique_peak2-36067-9-16--0.897849434846119-0.732381977911291	chr19	53420847	53421453	+	0	NA	intron (NM_010847, intron 3 of 5)	B1_Mus1|SINE|Alu	16214	NM_001008543	17859	Mm.2154	NM_010847	ENSMUSG00000025025	Mxi1	ENSMUSG00000067085|Gm10197|Mad2|bHLHc11	Max interacting protein 1	protein-coding
common_peak2-28273-54-60-0.242348424066847-0.538245270207283	chr4	128805622	128806830	+	0	NA	Intergenic	Intergenic	-7057	NM_001286081	15444	Mm.384452	NM_010471	ENSMUSG00000028785	Hpca	-	hippocalcin	protein-coding
unique_peak2-35990-8-6-0.197867495889966-1.03789460276074	chr19	29361545	29361975	+	0	NA	intron (NM_001048177, intron 9 of 23)	intron (NM_001048177, intron 9 of 23)	35467	NM_008413	16452	Mm.275839	NM_008413	ENSMUSG00000024789	Jak2	Fd17	Janus kinase 2	protein-coding
unique_peak2-36997-4-5--0.608423014574403-0.909929411522249	chr3	121636285	121636583	+	0	NA	Intergenic	LTR16B1|LTR|ERVL	-19810	NM_172525	214137	Mm.229287	NM_172525	ENSMUSG00000039831	Arhgap29	6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1	Rho GTPase activating protein 29	protein-coding
common_peak2-20883-66-107--0.236403837737627-0.546781255373177	chr11	3202001	3203411	+	0	NA	intron (NR_045109, intron 3 of 3)	intron (NR_045109, intron 3 of 3)	-6297	NR_045708	100302648	Mm.458664	NR_045708	ENSMUSG00000084941	Gm11944	OTTMUSG00000005017	predicted gene 11944	ncRNA
unique_peak2-35213-0-5--3.42509343119537-1.32905871926422	chr16	90810071	90810394	+	0	NA	intron (NM_029497, intron 1 of 38)	intron (NM_029497, intron 1 of 38)	426	NM_029497	207932	Mm.328688	NM_029497	ENSMUSG00000039929	Urb1	4921511H13Rik|5730405K23Rik|AA670781|AI645590|mKIAA0539	URB1 ribosome biogenesis 1 homolog (S. cerevisiae)	protein-coding
common_peak1-12598-27-49--0.652310238879489-1.08158034290998	chr18	24529155	24530242	+	0	NA	Intergenic	Intergenic	57973	NR_029573	387182		NR_029573	miRBase:MI0000229	Mir187	Mirn187|mmu-mir-187	microRNA 187	ncRNA
common_peak2-20554-45-54-0.0789983118202118-0.332057628060234	chr10	69872035	69873384	+	0	NA	Intergenic	Intergenic	-30707	NM_001143777	71721	Mm.477813	NM_024244	ENSMUSG00000043259	Fam13c	1200015N20Rik|C030038O19Rik|mKIAA1796	family with sequence similarity 13, member C	protein-coding
common_peak2-24313-25-32--0.182544214013348-0.333081040816759	chr17	44777067	44777774	+	0	NA	intron (NM_001271631, intron 2 of 4)	intron (NM_001271631, intron 2 of 4)	95705	NR_073425	12393	Mm.391013	NM_009820	ENSMUSG00000039153	Runx2	AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a	runt related transcription factor 2	protein-coding
unique_peak1-3081-12-2-2.06381348436648-2.79529063155376	chr18	21290755	21291451	+	0	NA	intron (NM_001033445, intron 4 of 5)	intron (NM_001033445, intron 4 of 5)	60258	NM_008586	17288	Mm.2682	NM_008586	ENSMUSG00000024313	Mep1b	Mep-1b	meprin 1 beta	protein-coding
common_peak2-25734-9-9--0.132314688483142-1.03275496310833	chr19	24288543	24288970	+	0	NA	intron (NM_011597, intron 1 of 22)	intron (NM_011597, intron 1 of 22)	10760	NM_011597	21873	Mm.104744	NM_011597	ENSMUSG00000024812	Tjp2	ZO-2	tight junction protein 2	protein-coding
common_peak1-9744-85-74-0.726584557628771-3.07269768555856	chr12	49390826	49392725	+	0	NA	Intergenic	Intergenic	-1092095	NM_001160112	15228	Mm.4704	NM_008241	ENSMUSG00000020950	Foxg1	2900064B05Rik|BF-1|Bf1|Hfh9|Hfhbf1	forkhead box G1	protein-coding
common_peak2-20742-24-17-0.623284901325404-0.890873221665474	chr10	108446353	108447160	+	0	NA	intron (NM_001252341, intron 1 of 11)	intron (NM_001252341, intron 1 of 11)	1275	NM_009306	20979	Mm.289702	NM_009306	ENSMUSG00000035864	Syt1	AW124717|G630098F17Rik|SytI	synaptotagmin I	protein-coding
unique_peak2-36561-7-7--0.200909169701811-0.97990265578305	chr2	168548945	168549252	+	0	NA	intron (NM_001289446, intron 1 of 27)	ORR1A2-int|LTR|MaLR	10741	NM_001289445	11981	Mm.330819	NM_015731	ENSMUSG00000027546	Atp9a	IIa	ATPase, class II, type 9A	protein-coding
common_peak2-31424-19-8-1.23276232521937-1.61268301619756	chr8	94682577	94683133	+	0	NA	Intergenic	Intergenic	197164	NR_110452	71296	Mm.86664	NR_033641	ENSMUSG00000031736	Crnde	4933436C20Rik	colorectal neoplasia differentially expressed (non-protein coding)	ncRNA
unique_peak1-3318-10-3-1.35641534500877-1.75805390616669	chr18	81035378	81035920	+	0	NA	intron (NM_001201569, intron 10 of 29)	intron (NM_001201569, intron 10 of 29)	95148	NM_001201569	50771	Mm.247138	NM_015805	ENSMUSG00000024566	Atp9b	AA934181|Atpc2b|IIb|MMR	ATPase, class II, type 9B	protein-coding
common_peak2-25137-25-12-1.16141018720401-1.87883858401928	chr18	42056675	42057383	+	0	NA	intron (NM_029942, intron 5 of 6)	intron (NM_029942, intron 5 of 6)	53819	NM_029942	77619	Mm.30649	NM_029942	ENSMUSG00000056671	Prelid2	1700003A01Rik|C330008K14Rik	PRELI domain containing 2	protein-coding
unique_peak2-33889-7-17--1.37083417114412-1.23399803405144	chr12	40036934	40037510	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	526924	NM_001163154	14009	Mm.4866	NM_007960	ENSMUSG00000004151	Etv1	ER81|Etsrp81	ets variant 1	protein-coding
unique_peak2-36847-4-5--0.608423014574403-0.909929411522249	chr3	89270345	89270704	+	0	NA	intron (NM_027348, intron 3 of 4)	RSINE1|SINE|B4	7031	NM_027348	68603	Mm.34242	NM_026784	ENSMUSG00000027952	Pmvk	1110011E12Rik|2900002L22Rik|AV001327|PMK|PMKA|PMKASE	phosphomevalonate kinase	protein-coding
unique_peak1-646-14-8-0.729291158915332-0.771068449301682	chr10	44015341	44015958	+	0	NA	intron (NM_053069, intron 4 of 7)	intron (NM_053069, intron 4 of 7)	27485	NM_053069	11793	Mm.22264	NM_053069	ENSMUSG00000038160	Atg5	2010107M05Rik|3110067M24Rik|AW319544|Apg5l|Atg5l|C88337|Paddy	autophagy related 5	protein-coding
common_peak1-18178-12-18--0.599151528355947-0.476916024233333	chr8	14911152	14911706	+	0	NA	promoter-TSS (NM_001037736)	promoter-TSS (NM_001037736)	-234	NM_172751	234094	Mm.240298	NM_172751	ENSMUSG00000071176	Arhgef10	6430549H08Rik|mKIAA0294	Rho guanine nucleotide exchange factor (GEF) 10	protein-coding
unique_peak1-461-8-0-3.00522241794757-2.70926996097583	chr1	170884317	170884806	+	0	NA	Intergenic	Lx|LINE|L1	463787	NR_105766	102465178		NR_105766	miRBase:MI0021876	Mir6348	mmu-mir-6348	microRNA mir-6348	ncRNA
unique_peak2-36001-6-12--1.13504160776079-1.45089835786865	chr19	37985695	37986433	+	0	NA	intron (NM_001099634, intron 45 of 52)	intron (NM_001099634, intron 45 of 52)	132003	NM_001099634	226101	Mm.34674	NM_177035	ENSMUSG00000048612	Myof	2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3	myoferlin	protein-coding
common_peak2-27824-17-21--0.24113528043226-0.322753776620787	chr3	145937887	145938486	+	0	NA	intron (NM_022983, intron 2 of 2)	intron (NM_022983, intron 2 of 2)	54261	NM_022983	65086	Mm.155520	NM_022983	ENSMUSG00000036832	Lpar3	Edg7|lpA3	lysophosphatidic acid receptor 3	protein-coding
unique_peak2-32721-5-6--0.511735258063458-0.947717972411649	chr1	159252811	159253257	+	0	NA	intron (NM_177644, intron 1 of 17)	intron (NM_177644, intron 1 of 17)	-89449	NR_027984	69953	Mm.286863	NM_027274	ENSMUSG00000049881	2810025M15Rik	AI429618	RIKEN cDNA 2810025M15 gene	ncRNA
common_peak1-14988-25-14-0.954959309736587-1.46151065785802	chr3	107895602	107896519	+	0	NA	promoter-TSS (NM_008141)	promoter-TSS (NM_008141)	76	NM_008141	14686	Mm.439652	NM_008141	ENSMUSG00000009108	Gnat2	AW490837|Gnat-2|Gt-2|Tcalpha	guanine nucleotide binding protein, alpha transducing 2	protein-coding
common_peak1-13717-13-13--0.0288828914198356-0.309074325783021	chr2	30771450	30772108	+	0	NA	Intergenic	Intergenic	-12962	NM_022415	64292	Mm.28768	NM_022415	ENSMUSG00000050737	Ptges	2410099E23Rik|D2Ertd369e|Pges|mPGES|mPGES-1	prostaglandin E synthase	protein-coding
unique_peak2-35367-9-11--0.395349094316936-0.344532117358383	chr17	27057376	27058085	+	0	NA	intron (NM_053173, intron 1 of 10)	intron (NM_053173, intron 1 of 10)	3694	NM_053173	16580	Mm.491138	NM_016761	ENSMUSG00000024301	Kifc5b	Hset|KNSL2|Kifc5a	kinesin family member C5B	protein-coding
unique_peak1-5193-13-6-0.971117108580164-1.01572999746118	chr5	32441987	32442598	+	0	NA	intron (NM_008037, intron 1 of 3)	intron (NM_008037, intron 1 of 3)	3447	NM_008037	14284	Mm.24684	NM_008037	ENSMUSG00000029135	Fosl2	Fra-2	fos-like antigen 2	protein-coding
common_peak2-32268-10-36--1.85303802062018-3.68843956647705	chrX	12587784	12588313	+	0	NA	Intergenic	Intergenic	-31093	NR_038158	70489	Mm.383563	NR_038158	ENSMUSG00000087424	5730405O15Rik	-	RIKEN cDNA 5730405O15 gene	ncRNA
common_peak2-25247-3-6--1.22133801201688-1.08602067057793	chr18	65052839	65053257	+	0	NA	intron (NM_001114386, intron 1 of 30)	B2_Mm2|SINE|B2	5638	NM_001114386	83814	Mm.98668	NM_031881	ENSMUSG00000024589	Nedd4l	1300012C07Rik|Nedd4-2|Nedd4b	neural precursor cell expressed, developmentally down-regulated gene 4-like	protein-coding
unique_peak1-4074-13-1-2.77847203063777-3.64038867156802	chr2	66148938	66149628	+	0	NA	intron (NM_018733, intron 17 of 26)	L1Md_F2|LINE|L1	-54609	NM_001290669	73668	Mm.250868	NM_001047604	ENSMUSG00000034848	Ttc21b	2410066K11Rik|Thm1|aln|mKIAA1992	tetratricopeptide repeat domain 21B	protein-coding
common_peak1-14187-36-35-0.309396084725442-0.573175361577103	chr2	144599817	144600611	+	0	NA	Intergenic	Intergenic	-49188	NM_025490	66328	Mm.45377	NM_025490	ENSMUSG00000027431	Scp2d1	1700010M22Rik	SCP2 sterol-binding domain containing 1	protein-coding
unique_peak1-2967-13-3-1.77847203063777-2.58603100924543	chr17	72649172	72649912	+	0	NA	intron (NM_007439, intron 3 of 28)	intron (NM_007439, intron 3 of 28)	304105	NM_007439	11682	Mm.311854	NM_007439	ENSMUSG00000055471	Alk	CD246|Tcrz	anaplastic lymphoma kinase	protein-coding
common_peak2-27272-24-23-0.208247402046561-0.407645899519042	chr3	57318624	57319905	+	0	NA	intron (NM_133784, intron 2 of 6)	AT_rich|Low_complexity|Low_complexity	60534	NM_133784	97064	Mm.405029	NM_133784	ENSMUSG00000027803	Wwtr1	2310058J06Rik|2610021I22Rik|C78399|Taz	WW domain containing transcription regulator 1	protein-coding
common_peak1-13226-34-55--0.425286395056338-0.680499470139652	chr19	26747088	26748236	+	0	NA	intron (NM_011416, intron 14 of 32)	intron (NM_011416, intron 14 of 32)	68012	NM_011416	67155	Mm.491146	NM_011416	ENSMUSG00000024921	Smarca2	2610209L14Rik|SNF2alpha|Snf2l2|brahma|brm	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	protein-coding
unique_peak2-33052-9-31--1.81038659359578-3.08022526292111	chr10	75859768	75860260	+	0	NA	intron (NM_008787, intron 23 of 41)	ORR1D1|LTR|MaLR	8254	NR_040580	67523	Mm.437833	NR_040580		1700094J05Rik	-	RIKEN cDNA 1700094J05 gene	ncRNA
unique_peak1-2545-7-0-2.79909083029819-2.40823996531185	chr16	23217732	23218082	+	0	NA	Intergenic	Intergenic	-6906	NM_145933	20440	Mm.149029	NM_145933	ENSMUSG00000022885	St6gal1	AW742324|Siat1|St6Gal-I|St6gal|St6galI	beta galactoside alpha 2,6 sialyltransferase 1	protein-coding
unique_peak1-1750-26-8-1.75797409071615-3.2467506969819	chr13	107846226	107847248	+	0	NA	Intergenic	Intergenic	34087	NR_015471	100040322	Mm.133867	NR_015471		3830408C21Rik	-	RIKEN cDNA 3830408C21 gene	ncRNA
common_peak1-15702-28-10-1.59352750118417-3.11713623526325	chr4	139622494	139623429	+	0	NA	intron (NM_198610, intron 4 of 9)	intron (NM_198610, intron 4 of 9)	-99020	NM_173427	242721	Mm.60400	NM_173427	ENSMUSG00000078234	Klhdc7a	B230308G19Rik	kelch domain containing 7A	protein-coding
common_peak2-31578-13-19--0.543456064249594-0.466170754204149	chr8	119777734	119778502	+	0	NA	Intergenic	Intergenic	-2801	NM_001163262	74440	Mm.233181	NM_028941	ENSMUSG00000034390	Cmip	4933407C03Rik|5830471E12Rik|AI314065|AI464126	c-Maf inducing protein	protein-coding
common_peak2-30120-10-5-0.771452844287613-1.33892459842472	chr6	137515468	137515841	+	0	NA	intron (NM_001271588, intron 1 of 20)	(T)n|Simple_repeat|Simple_repeat	3876	NM_001271595	13860	Mm.235346	NM_007945	ENSMUSG00000015766	Eps8	AW261790	epidermal growth factor receptor pathway substrate 8	protein-coding
unique_peak1-679-11-6-0.701338662194009-1.32595962126035	chr10	75465849	75466446	+	0	NA	intron (NM_198635, intron 11 of 13)	B2_Mm2|SINE|B2	-5524	NR_105836	102466646		NR_105836	miRBase:MI0021946	Mir6409	mmu-mir-6409	microRNA mir-6409	ncRNA
unique_peak1-5338-12-0-3.64877598508764-4.21441993929574	chr5	90741619	90742352	+	0	NA	intron (NM_030886, intron 2 of 34)	intron (NM_030886, intron 2 of 34)	53226	NM_030886	81702	Mm.245522	NM_030886	ENSMUSG00000055204	Ankrd17	4933425K22Rik|A130069E23Rik|A930008M01|AA407558|AA516750|AU040470|Foe|Gtar|Mask|mKIAA0697	ankyrin repeat domain 17	protein-coding
common_peak1-14636-25-16-0.774387064094767-1.1282783422172	chr3	57073025	57073930	+	0	NA	Intergenic	MER117|DNA|MER1_type	32364	NM_008536	17112	Mm.856	NM_008536	ENSMUSG00000027800	Tm4sf1	L6|M3s1	transmembrane 4 superfamily member 1	protein-coding
unique_peak1-5709-10-5-0.771452844287613-1.33892459842472	chr6	38789248	38789682	+	0	NA	intron (NM_001294144, intron 1 of 14)	intron (NM_001294144, intron 1 of 14)	-2155	NM_001136065	15258	Mm.23790	NM_010433	ENSMUSG00000061436	Hipk2	1110014O20Rik|B230339E18Rik|Stank	homeodomain interacting protein kinase 2	protein-coding
common_peak2-24656-8-6-0.197867495889966-1.03789460276074	chr17	35779331	35779745	+	0	NA	intron (NM_001033366, intron 1 of 2)	intron (NM_001033366, intron 1 of 2)	1102	NM_001033366	268949	Mm.296301	NM_001033366	ENSMUSG00000073408	Dpcr1	Gm630	diffuse panbronchiolitis critical region 1 (human)	protein-coding
common_peak2-24897-14-18--0.348711353085941-0.360333814299795	chr17	84083873	84084668	+	0	NA	Intergenic	MTB|LTR|MaLR	-21233	NM_001171054	116871	Mm.277668	NM_054082	ENSMUSG00000055817	Mta3	1110002J22Rik|mKIAA1266	metastasis associated 3	protein-coding
unique_peak1-1021-84-14-3.02804346328051-21.6615097094304	chr11	75245484	75247599	+	0	NA	intron (NM_008878, intron 9 of 9)	intron (NM_008878, intron 9 of 9)	6462	NM_008878	18816	Mm.279733	NM_008878	ENSMUSG00000038224	Serpinf2	AI747498|Pli|Serpimf2	serine (or cysteine) peptidase inhibitor, clade F, member 2	protein-coding
common_peak1-11014-46-51-0.19755622510771-0.459662873060263	chr15	37960279	37961203	+	0	NA	intron (NM_001081359, intron 9 of 58)	intron (NM_001081359, intron 9 of 58)	47868	NM_001112721	70790	Mm.476840	NM_027553	ENSMUSG00000037487	Ubr5	Edd|Edd1	ubiquitin protein ligase E3 component n-recognin 5	protein-coding
unique_peak1-6327-10-5-0.771452844287613-1.33892459842472	chr7	46837854	46838350	+	0	NA	Intergenic	B1_Mur3|SINE|Alu	64966	NM_001004139	70227	Mm.333800	NM_001004139	ENSMUSG00000068959	Zfp619	3000002G13Rik	zinc finger protein 619	protein-coding
common_peak2-22562-11-7-0.508693584251613-1.21681515183528	chr13	63252630	63253239	+	0	NA	intron (NM_001289926, intron 5 of 15)	B4|SINE|B4	-88404	NR_110520	72061	Mm.188105	NM_028079	ENSMUSG00000021458	2010111I01Rik	2300006M17Rik|AP-O|Aopep	RIKEN cDNA 2010111I01 gene	protein-coding
common_peak2-21330-29-33-0.0248272393647717-0.313805205020552	chr11	75651413	75652137	+	0	NA	intron (NM_029548, intron 5 of 7)	intron (NM_029548, intron 5 of 7)	-42216	NM_007873	13447	Mm.5137	NM_007873	ENSMUSG00000020848	Doc2b	-	double C2, beta	protein-coding
common_peak2-31099-32-46--0.275496832457978-0.426350872773373	chr8	26975902	26977131	+	0	NA	intron (NM_008432, intron 7 of 26)	intron (NM_008432, intron 7 of 26)	16421	NM_008432	16532	Mm.289679	NM_008432	ENSMUSG00000031576	Kcnu1	Kcnma3|Slo3|mSlo3	potassium channel, subfamily U, member 1	protein-coding
common_peak2-29699-17-13-0.410941416147434-0.546772548767014	chr6	83024061	83024582	+	0	NA	Intergenic	Intergenic	-4063	NM_197992	69837	Mm.12261	NM_197992	ENSMUSG00000069678	Pcgf1	2010002K04Rik|AU024121|Nspc1	polycomb group ring finger 1	protein-coding
unique_peak2-36613-2-12--2.61789397440441-2.55640854263862	chr2	181525677	181526305	+	0	NA	intron (NM_001171615, intron 4 of 22)	intron (NM_001171615, intron 4 of 22)	-5021	NM_001171680	17932	Mm.458718	NM_008665	ENSMUSG00000010505	Myt1	Nzf2|Nzf2a|Nzf2b|Nztf2	myelin transcription factor 1	protein-coding
common_peak2-21552-18-14-0.406028555619833-0.532159081577619	chr11	96789116	96789495	+	0	NA	Intergenic	Intergenic	-1333	NM_146026	217138	Mm.342551	NM_146026		Prr15l	Atad4|BC022765|E230006A12Rik	proline rich 15-like	protein-coding
common_peak1-18454-16-12-0.417823924126969-0.489164546851866	chr8	83899838	83900535	+	0	NA	intron (NM_001297596, intron 1 of 24)	intron (NM_001297596, intron 1 of 24)	33725	NM_001297593	234515	Mm.324468	NM_001024617	ENSMUSG00000037940	Inpp4b	E130107I17Rik	inositol polyphosphate-4-phosphatase, type II	protein-coding
unique_peak2-39080-5-6--0.511735258063458-0.947717972411649	chr8	73178777	73179152	+	0	NA	intron (NM_023217, intron 2 of 4)	B1_Mm|SINE|Alu	4673	NM_023217	66522	Mm.154906	NM_023217	ENSMUSG00000056204	Pgpep1	2810003H13Rik|Gm19458|PAP-I|PGP|PGP-I|PGPI|Pcp	pyroglutamyl-peptidase I	protein-coding
common_peak1-16337-10-12--0.344024373132323-0.340565874754526	chr5	117388506	117389084	+	0	NA	Intergenic	L1MA4|LINE|L1	177207	NM_001122666	71954	Mm.34456	NM_178622	ENSMUSG00000066900	Suds3	2400003N08Rik|2410008L21Rik|AU067672|mSds3	suppressor of defective silencing 3 homolog (S. cerevisiae)	protein-coding
unique_peak2-38391-7-10--0.660340788339108-1.12966497611638	chr7	19265873	19266563	+	0	NA	exon (NM_054058, exon 5 of 6)	exon (NM_054058, exon 5 of 6)	5123	NM_054058	434540	Mm.479863	NM_054058		Psg20	Cea7|EG434540	pregnancy-specific glycoprotein 20	protein-coding
unique_peak1-5732-8-0-3.00522241794757-2.70926996097583	chr6	43441756	43442162	+	0	NA	intron (NM_013861, intron 5 of 8)	(TA)n|Simple_repeat|Simple_repeat	49531	NR_045988	319812	Mm.446393	NR_045988		9430018G01Rik	-	RIKEN cDNA 9430018G01 gene	ncRNA
common_peak1-12526-13-9-0.456543935750406-0.53895475198017	chr18	64044877	64045403	+	0	NA	intron (NM_001014981, intron 21 of 27)	Lx8|LINE|L1	176791	NM_001014981	104082	Mm.30850	NM_001014981	ENSMUSG00000040560	Wdr7	AI462727|TRAG|mKIAA0541	WD repeat domain 7	protein-coding
unique_peak1-4101-10-1-2.35641534500877-2.57096726280955	chr2	73585098	73585614	+	0	NA	intron (NM_001113246, intron 1 of 12)	intron (NM_001113246, intron 1 of 12)	28047	NM_001166603	108699	Mm.257073	NM_029716	ENSMUSG00000056486	Chn1	0610007I19Rik|0710001E19Rik|1700112L09Rik|2900046J01Rik|AI413815|ARHGAP2	chimerin 1	protein-coding
unique_peak1-219-10-2-1.77145284428761-2.09384600808989	chr1	88431870	88432262	+	0	NA	Intergenic	B1_Mm|SINE|Alu	8755	NM_008972	19231	Mm.19187	NM_008972	ENSMUSG00000026238	Ptma	Thym	prothymosin alpha	protein-coding
unique_peak2-36257-13-22--0.745089925419244-0.690311289528838	chr2	52958842	52959872	+	0	NA	intron (NM_172409, intron 10 of 26)	B2_Mm2|SINE|B2	90864	NM_018785	56194	Mm.257474	NM_018785	ENSMUSG00000061136	Prpf40a	2810012K09Rik|FBP11|Fnbp11|Fnbp3	PRP40 pre-mRNA processing factor 40 homolog A (yeast)	protein-coding
unique_peak1-4552-11-2-1.92373108353046-2.32232533660526	chr3	40892448	40893046	+	0	NA	Intergenic	Charlie2b|DNA|MER1_type	-5779	NM_027558	70804	Mm.40321	NM_027558	ENSMUSG00000049940	Pgrmc2	4631434O19Rik|5730409G06Rik|DG6|PMBP	progesterone receptor membrane component 2	protein-coding
unique_peak1-3858-9-2-1.60465090568306-1.87199725847353	chr2	6354727	6355278	+	0	NA	intron (NM_181399, intron 13 of 13)	intron (NM_181399, intron 13 of 13)	81220	NM_181399	98910	Mm.40673	NM_181399	ENSMUSG00000039046	Usp6nl	AI316785|RNTRE|TRE2NL|mKIAA0019	USP6 N-terminal like	protein-coding
unique_peak2-38003-4-10--1.48289213249054-1.5150158574804	chr6	29467792	29468345	+	0	NA	Intergenic	Intergenic	-8557	NM_012057	27056	Mm.6479	NM_012057	ENSMUSG00000029771	Irf5	AW491843|mirf5	interferon regulatory factor 5	protein-coding
common_peak2-19880-35-37-0.183442745018919-0.398838069828027	chr1	93680216	93681186	+	0	NA	Intergenic	Intergenic	-17353	NM_007855	13345	Mm.9474	NM_007855	ENSMUSG00000007805	Twist2	Dermo1|bHLHa39	twist basic helix-loop-helix transcription factor 2	protein-coding
common_peak1-13806-64-81-0.10789439709052-0.364007861551466	chr2	48813095	48814924	+	0	NA	intron (NM_029924, intron 1 of 16)	intron (NM_029924, intron 1 of 16)	8981	NM_029924	109241	Mm.440436	NM_029924	ENSMUSG00000036792	Mbd5	9430004D19Rik|AA536666|AI426407|C030040A15Rik|Gm1630|OTTMUSG00000012483	methyl-CpG binding domain protein 5	protein-coding
unique_peak1-967-10-0-3.35641534500877-3.31132995230379	chr11	61597281	61597791	+	0	NA	intron (NM_013881, intron 22 of 26)	intron (NM_013881, intron 22 of 26)	-21946	NM_001164243	212627	Mm.27703	NM_144806	ENSMUSG00000020528	Prpsap2	A230054F23Rik	phosphoribosyl pyrophosphate synthetase-associated protein 2	protein-coding
unique_peak1-3017-18-4-1.99099105634099-2.82951996911245	chr17	87501842	87502766	+	0	NA	Intergenic	Intergenic	-4715	NM_019654	56468	Mm.126885	NM_019654	ENSMUSG00000037104	Socs5	1810018L08Rik|Cish5|mKIAA0671	suppressor of cytokine signaling 5	protein-coding
common_peak1-14656-19-19-0.0807592317743238-0.322753776620787	chr3	57651199	57652057	+	0	NA	promoter-TSS (NM_019410)	promoter-TSS (NM_019410)	51	NM_019410	18645	Mm.271744	NM_019410	ENSMUSG00000027805	Pfn2	Pfn	profilin 2	protein-coding
common_peak1-14311-24-22-0.269647946710704-0.457753417732779	chr2	163073230	163074221	+	0	NA	intron (NM_001098799, intron 2 of 8)	intron (NM_001098799, intron 2 of 8)	22535	NM_001098799	269389	Mm.207709	NM_001098799	ENSMUSG00000074607	Tox2	AI851523|AV026525|BI987407|Gcx1|RxHMG1	TOX high mobility group box family member 2	protein-coding
unique_peak1-4453-12-5-1.06381348436648-1.78669045979184	chr2	173320758	173321445	+	0	NA	Intergenic	ORR1A4|LTR|MaLR	-26992	NM_028158	72221	Mm.46132	NM_028158	ENSMUSG00000027518	1700021F07Rik	-	RIKEN cDNA 1700021F07 gene	protein-coding
common_peak2-24263-15-5-1.4272022498345-1.61682445937017	chr16	93732181	93732588	+	0	NA	intron (NM_026700, intron 2 of 3)	intron (NM_026700, intron 2 of 3)	20232	NM_027293	70028	Mm.23230	NM_026700	ENSMUSG00000022946	Dopey2	0610038M01Rik|2610510B01Rik|AI503246|C21orf5|mKIAA0933	dopey family member 2	protein-coding
unique_peak2-38500-3-6--1.22133801201688-1.08602067057793	chr7	38226574	38226979	+	0	NA	Intergenic	Intergenic	327995	NM_172385	243937	Mm.322505	NM_172385	ENSMUSG00000043456	Zfp536	9630010P11Rik|Znf536|mKIAA0390	zinc finger protein 536	protein-coding
common_peak1-15329-46-23-1.31303344252765-4.01185321998351	chr4	46622410	46623916	+	0	NA	intron (NM_198664, intron 9 of 12)	B2_Mm2|SINE|B2	-8362	NM_001164804	107684	Mm.416311	NM_178893	ENSMUSG00000028337	Coro2a	9030208C03Rik|AI563590|IR10	coronin, actin binding protein 2A	protein-coding
unique_peak2-38485-9-19--1.13231468848314-1.09394599973099	chr7	31150421	31151063	+	0	NA	Intergenic	(GGA)n|Simple_repeat|Simple_repeat	-2951	NM_175478	233067	Mm.23157	NM_175478	ENSMUSG00000036957	Lrfn3	A530045B06Rik|SALM4	leucine rich repeat and fibronectin type III domain containing 3	protein-coding
common_peak1-18851-44-57--0.0360881605590366-0.301029995664025	chr9	20606707	20607954	+	0	NA	intron (NM_016919, intron 10 of 66)	intron (NM_016919, intron 10 of 66)	12148	NM_016919	53867	Mm.334994	NM_016919	ENSMUSG00000004098	Col5a3	-	collagen, type V, alpha 3	protein-coding
unique_peak2-36393-5-11--1.28934283672701-1.477227296591	chr2	120849875	120850506	+	0	NA	intron (NM_013513, intron 10 of 12)	intron (NM_013513, intron 10 of 12)	12301	NM_013513	13828	Mm.240051	NM_013513	ENSMUSG00000023216	Epb4.2	Epb42	erythrocyte protein band 4.2	protein-coding
unique_peak2-35819-2-9--2.23938235115068-1.87199725847353	chr18	64339247	64339655	+	0	NA	intron (NR_045366, intron 2 of 5)	intron (NR_045366, intron 2 of 5)	-74562	NM_009182	20451	Mm.252110	NM_009182	ENSMUSG00000056812	St8sia3	AI847333|ST8SiaIII|Siat8c	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	protein-coding
unique_peak1-4792-6-4-0.24347001549294-0.989110657569874	chr3	132788511	132788884	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	33780	NM_027927	71793	Mm.246726	NM_027927	ENSMUSG00000028016	Ints12	1110020M19Rik|2810027J24Rik|4930529N21Rik|A230056J18Rik|AI666778|Phf22	integrator complex subunit 12	protein-coding
unique_peak2-32506-9-16--0.897849434846119-0.732381977911291	chr1	51478593	51479007	+	0	NA	Intergenic	RLTR45-int|LTR|ERVK	56443	NM_028696	109019	Mm.196290	NM_028696	ENSMUSG00000026107	Nabp1	4930434H03Rik|4930442A21Rik|4930488J04Rik|4933440J18Rik|5830411E10Rik|AI852561|Nbp1|Obfc2a|Ssb2	nucleic acid binding protein 1	protein-coding
unique_peak2-34698-7-6--0.00826409175941478-0.97990265578305	chr15	27544971	27545268	+	0	NA	intron (NM_001013792, intron 4 of 6)	intron (NM_001013792, intron 4 of 6)	15329	NM_001013792	432940	Mm.309164	NM_001013792	ENSMUSG00000046034	Otulin	C79097|Fam105b|m3Sapc|m7-1Sapc	OTU deubiquitinase with linear linkage specificity	protein-coding
common_peak1-14223-41-27-0.893793782791056-2.04885494247584	chr2	152331731	152332962	+	0	NA	Intergenic	B4|SINE|B4	5126	NM_001039120	654457	Mm.389363	NM_001039120	ENSMUSG00000074680	Defb26	EG654457	defensin beta 26	protein-coding
common_peak2-27609-11-12--0.191746133889479-0.310474156842889	chr3	104226800	104227280	+	0	NA	Intergenic	MTA_Mm-int|LTR|MaLR	88739	NM_001025067	269473	Mm.34855	NM_001025067	ENSMUSG00000032913	Lrig2	4632419I10Rik|BB096938	leucine-rich repeats and immunoglobulin-like domains 2	protein-coding
unique_peak1-6049-10-2-1.77145284428761-2.09384600808989	chr6	115482212	115482695	+	0	NA	Intergenic	Intergenic	-12269	NM_199033	381802	Mm.291208	NM_199033	ENSMUSG00000042389	Tsen2	AU067695	tRNA splicing endonuclease 2 homolog (S. cerevisiae)	protein-coding
common_peak1-18488-54-55-0.36573083957213-0.796654548817852	chr8	85024519	85025957	+	0	NA	Intergenic	L1MEg|LINE|L1	-98753	NM_008357	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
unique_peak2-39235-2-9--2.23938235115068-1.87199725847353	chr8	111619401	111619833	+	0	NA	Intergenic	Intergenic	158857	NR_037295	100526511		NR_037295		Mir3108	mmu-mir-3108	microRNA 3108	ncRNA
common_peak2-30341-70-74-0.391148225879518-1.03059905972714	chr7	25753579	25755272	+	0	NA	TTS (NM_010261)	TTS (NM_010261)	669	NR_106013	102465633		NR_106013		Mir7046	mmu-mir-7046	microRNA mir-7046	ncRNA
unique_peak2-35703-2-7--1.91745425626332-1.45399745587252	chr18	31635148	31635471	+	0	NA	Intergenic	Intergenic	-28240	NM_009308	20983	Mm.233846	NM_009308	ENSMUSG00000024261	Syt4	SytIV	synaptotagmin IV	protein-coding
common_peak2-28182-17-30--0.735899972181837-0.841847921495509	chr4	114999987	115001094	+	0	NA	intron (NM_177406, intron 9 of 11)	intron (NM_177406, intron 9 of 11)	28889	NM_177406	277753	Mm.276106	NM_177406	ENSMUSG00000066071	Cyp4a12a	BC025936|Cyp4a12	cytochrome P450, family 4, subfamily a, polypeptide 12a	protein-coding
common_peak2-24317-15-12-0.311725032414564-0.425539671739611	chr17	57032139	57032789	+	0	NA	3' UTR (NM_022328, exon 12 of 12)	3' UTR (NM_022328, exon 12 of 12)	17408	NM_030141	78625	Mm.160106	NM_030141	ENSMUSG00000024209	1700061G19Rik	1700026H02|AI507598	RIKEN cDNA 1700061G19 gene	protein-coding
unique_peak2-36968-3-10--1.87341470859657-1.75805390616669	chr3	113341741	113342266	+	0	NA	Intergenic	ORR1A1-int|LTR|MaLR	-8936	NM_001038696	67225	Mm.316928	NM_026043	ENSMUSG00000027981	Rnpc3	2810441O16Rik|AI447568|C030014B17Rik	RNA-binding region (RNP1, RRM) containing 3	protein-coding
unique_peak2-33543-2-5--1.50241675698448-1.08602067057793	chr11	78377456	78377724	+	0	NA	Intergenic	B3|SINE|B2	-13353	NM_133706	69071	Mm.29431	NM_133706	ENSMUSG00000037278	Tmem97	1810014L12Rik|AI115531|AL022956|D11Bhm182e	transmembrane protein 97	protein-coding
common_peak2-29384-54-60-0.242348424066847-0.538245270207283	chr6	38550525	38551971	+	0	NA	intron (NM_138680, intron 8 of 9)	AT_rich|Low_complexity|Low_complexity	35991	NM_001033171	74253	Mm.121859	NM_001033171	ENSMUSG00000071537	Klrg2	2310020F24Rik	killer cell lectin-like receptor subfamily G, member 2	protein-coding
common_peak2-30662-23-23-0.136805003787924-0.340939137447793	chr7	101321128	101322035	+	0	NA	Intergenic	Intergenic	1093192	NM_021427	58238	Mm.113787	NM_021427		Fam181b	A830059I20Rik|AB041569	family with sequence similarity 181, member B	protein-coding
common_peak2-25536-18-25--0.38752056691274-0.421916810733234	chr19	5912020	5912827	+	0	NA	intron (NM_011262, intron 1 of 10)	CpG	448	NM_011262	19708	Mm.2651	NM_011262	ENSMUSG00000024826	Dpf2	2210010M07Rik|BAF45D|Req|ubi-d4	D4, zinc and double PHD fingers family 2	protein-coding
unique_peak1-123-8-1-2.00522241794757-2.05605744720049	chr1	61992153	61992646	+	0	NA	intron (NM_001081050, intron 2 of 22)	Lx|LINE|L1	307001	NM_001081050	72823	Mm.35153	NM_001081050	ENSMUSG00000052062	Pard3b	1810008K04Rik|2010002N16Rik|2810455B10Rik|Als2cr19|PAR3B|PAR3L|PAR3beta	par-3 family cell polarity regulator beta	protein-coding
common_peak1-14415-13-13--0.0288828914198356-0.309074325783021	chr2	180033540	180034150	+	0	NA	Intergenic	RLTR16|LTR|ERVK	-9261	NM_173031	271887	Mm.246640	NM_173031	ENSMUSG00000038980	Rbbp8nl	4732416F18	RBBP8 N-terminal like	protein-coding
unique_peak1-3626-12-1-2.64877598508764-3.36932189928148	chr19	36904189	36904698	+	0	NA	Intergenic	L1MB2|LINE|L1	-4279	NM_001163635	74493	Mm.249310	NM_001163635	ENSMUSG00000024811	Tnks2	5430432P15Rik|AA517131|AI662480|ARTD6|TNKS-2|Tank2	tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2	protein-coding
unique_peak1-7112-13-3-1.77847203063777-2.58603100924543	chr9	44232858	44233438	+	0	NA	Intergenic	RMER10A|LTR|ERVL	-7058	NM_201372	382073	Mm.259573	NM_201372	ENSMUSG00000043923	Ccdc84	D630044F24Rik|Gm1114	coiled-coil domain containing 84	protein-coding
unique_peak2-34651-1-10--3.08648862885404-2.57096726280955	chr14	118236317	118236919	+	0	NA	intron (NM_011821, intron 4 of 8)	B4|SINE|B4	116451	NR_105747	102465148		NR_105747	miRBase:MI0021586	Mir6239	mmu-mir-6239	microRNA mir-6239	ncRNA
unique_peak2-38581-2-5--1.50241675698448-1.08602067057793	chr7	67342175	67342458	+	0	NA	Intergenic	RSINE1|SINE|B4	-57211	NM_001082962	20646	Mm.274995	NM_013670	ENSMUSG00000000948	Snrpn	2410045I01Rik|HCERN3|Peg4|Pwcr1|SMN	small nuclear ribonucleoprotein N	protein-coding
unique_peak2-35358-1-8--2.79698201165906-2.05605744720049	chr17	26419927	26420376	+	0	NA	3' UTR (NM_028190, exon 10 of 10)	3' UTR (NM_028190, exon 10 of 10)	30296	NR_037905	66978	Mm.440216	NM_025881	ENSMUSG00000024188	Luc7l	1810045C04Rik|2410018D03Rik	Luc7 homolog (S. cerevisiae)-like	protein-coding
unique_peak1-4412-19-5-1.81772482594053-2.59995804677862	chr2	167697883	167698694	+	0	NA	Intergenic	Intergenic	-59539	NM_011201	19246	Mm.277916	NM_011201	ENSMUSG00000027540	Ptpn1	PTP-1B|PTP-HA2|PTP1B	protein tyrosine phosphatase, non-receptor type 1	protein-coding
common_peak2-25743-25-11-1.27688740462395-2.12469164491494	chr19	26749673	26750193	+	0	NA	intron (NM_011416, intron 14 of 32)	intron (NM_011416, intron 14 of 32)	70283	NM_011416	67155	Mm.491146	NM_011416	ENSMUSG00000024921	Smarca2	2610209L14Rik|SNF2alpha|Snf2l2|brahma|brm	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	protein-coding
unique_peak1-6073-34-6-2.57471360494366-6.89626809252057	chr6	120145055	120146427	+	0	NA	intron (NM_016718, intron 1 of 3)	intron (NM_016718, intron 1 of 3)	98836	NM_198884	330406	Mm.321840	NM_198884	ENSMUSG00000041372	B4galnt3	AB114826|B4GalNAcT3|C330047A21	beta-1,4-N-acetyl-galactosaminyl transferase 3	protein-coding
common_peak2-25412-27-23-0.40658345017408-0.622271369641148	chr19	46038910	46039571	+	0	NA	intron (NM_198296, intron 8 of 25)	intron (NM_198296, intron 8 of 25)	33738	NM_198296	71617	Mm.210949	NM_198296	ENSMUSG00000039901	9130011E15Rik	AI431055|AW050122	RIKEN cDNA 9130011E15 gene	protein-coding
common_peak2-23869-28-45--0.470602836235551-0.703513783457792	chr15	102670339	102671129	+	0	NA	Intergenic	Intergenic	-80828	NM_010464	15422	Mm.207062	NM_010464	ENSMUSG00000001655	Hoxc13	-	homeobox C13	protein-coding
common_peak2-20704-23-29--0.185123091099438-0.336580821310529	chr10	93425187	93425849	+	0	NA	TTS (NR_029764)	TTS (NR_029764)	1090	NR_029764	723908		NR_029764	miRBase:MI0000609	Mir331	Mirn331|mmu-mir-331	microRNA 331	ncRNA
common_peak1-16307-77-104-0.070281061889875-0.337564225507046	chr5	114378749	114381369	+	0	NA	Intergenic	Intergenic	-21344	NM_011779	23790	Mm.260158	NM_011779	ENSMUSG00000004530	Coro1c	AL022675|AW455561|AW548837	coronin, actin binding protein 1C	protein-coding
common_peak1-11605-18-17-0.142994149786039-0.353907621462753	chr16	17922031	17922581	+	0	NA	Intergenic	CpG	6006	NM_153150	13358	Mm.229291	NM_153150	ENSMUSG00000003528	Slc25a1	1300019P08Rik|2610100G11Rik|AI194714|Ctp|Dgsj|Slc20a3	solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1	protein-coding
unique_peak1-628-10-2-1.77145284428761-2.09384600808989	chr10	30754943	30755467	+	0	NA	Intergenic	Intergenic	-192616	NM_013904	15214	Mm.103573	NM_013904	ENSMUSG00000019789	Hey2	CHF1|Herp1|Hrt2|bHLHb32|hesr2	hairy/enhancer-of-split related with YRPW motif 2	protein-coding
unique_peak1-6744-36-6-2.67196616411015-7.63095141572459	chr8	46844211	46845684	+	0	NA	intron (NM_172752, intron 7 of 22)	intron (NM_172752, intron 7 of 22)	59704	NR_045739	319940	Mm.441720	NR_045739	ENSMUSG00000085440	Sorbs2os	D330022K07Rik	sorbin and SH3 domain containing 2, opposite strand	ncRNA
common_peak2-32094-15-24--0.631691439219068-0.650819692678081	chr9	98563424	98564113	+	0	NA	Intergenic	Intergenic	-61670	NM_025485	64655	Mm.17949	NM_025485	ENSMUSG00000032459	Mrps22	3100002P07Rik|Rpms22	mitochondrial ribosomal protein S22	protein-coding
unique_peak2-38952-7-16--1.28837201095215-1.08658567012551	chr8	27262025	27262596	+	0	NA	Intergenic	Intergenic	-6331	NM_199042	73754	Mm.383241	NM_199042		Thap1	4833431A01Rik|AW490810	THAP domain containing, apoptosis associated protein 1	protein-coding
unique_peak2-36580-7-7--0.200909169701811-0.97990265578305	chr2	175141383	175141803	+	0	NA	intron (NM_001177543, intron 5 of 5).2	RMER15|LTR|ERVL	22120	NM_001100415	627914	Mm.466613	NM_001100415		Gm14430	OTTMUSG00000016607	predicted gene 14430	protein-coding
unique_peak2-33123-4-11--1.6084230145744-1.68134727924692	chr10	81464693	81465430	+	0	NA	Intergenic	RLTR19-int|LTR|ERVK	-45811	NM_001024626	408062	Mm.391409	NM_001024626		Zfp873	-	zinc finger protein 873	protein-coding
common_peak2-28392-6-6--0.241956811677302-0.947717972411649	chr4	139579761	139580168	+	0	NA	Intergenic	Intergenic	-56023	NM_173427	242721	Mm.60400	NM_173427	ENSMUSG00000078234	Klhdc7a	B230308G19Rik	kelch domain containing 7A	protein-coding
common_peak1-13800-18-37--0.935008362215234-1.41893667893732	chr2	44926247	44926917	+	0	NA	intron (NM_001289521, intron 1 of 8)	intron (NM_001289521, intron 1 of 8)	39215	NM_001289521	24136	Mm.440702	NM_015753	ENSMUSG00000026872	Zeb2	9130203F04Rik|D130016B08Rik|SIP1|Zfhx1b|Zfx1b|Zfxh1b	zinc finger E-box binding homeobox 2	protein-coding
unique_peak1-6758-11-5-0.923731083530457-1.477227296591	chr8	56284816	56285357	+	0	NA	Intergenic	Intergenic	245005	NM_001253756	234267	Mm.241700	NM_153581	ENSMUSG00000031517	Gpm6a	Gpm6|M6A	glycoprotein m6a	protein-coding
common_peak1-10458-14-12-0.198776442216552-0.373562084705529	chr13	109230033	109230626	+	0	NA	Intergenic	Intergenic	123798	NM_178683	218581	Mm.32318	NM_178683	ENSMUSG00000021697	Depdc1b	9830132O03|AW260467|XTP1	DEP domain containing 1B	protein-coding
common_peak1-13855-20-4-2.16614668970383-3.28004177908661	chr2	65223422	65224334	+	0	NA	Intergenic	Intergenic	-21421	NR_105755	102466151		NR_105755	miRBase:MI0021865	Mir6337	mmu-mir-6337	microRNA mir-6337	ncRNA
unique_peak2-37954-5-11--1.28934283672701-1.477227296591	chr5	151189667	151190305	+	0	NA	intron (NM_172887, intron 18 of 60)	PB1D10|SINE|Alu	114808	NR_024513	194292	Mm.300184	NR_024513		Gm5	Gm1812	predicted gene 5	ncRNA
common_peak1-11649-8-10--0.454209200689727-1.078512453669	chr16	23166514	23166959	+	0	NA	Intergenic	Intergenic	20127	NM_009605	11450	Mm.3969	NM_009605	ENSMUSG00000022878	Adipoq	30kDa|APN|Acdc|Acrp30|GBP28|adipo|apM1	adiponectin, C1Q and collagen domain containing	protein-coding
unique_peak2-34511-6-6--0.241956811677302-0.947717972411649	chr14	50944442	50944931	+	0	NA	Intergenic	Intergenic	-4178	NM_146664	258658	Mm.377621	NM_146664	ENSMUSG00000045306	Olfr734	MOR242-1	olfactory receptor 734	protein-coding
common_peak2-29286-27-40--0.366006053722848-0.494448899774786	chr5	143622376	143623205	+	0	NA	Intergenic	B2_Mm2|SINE|B2	34127	NM_001033312	231863	Mm.89753	NM_001033312	ENSMUSG00000066640	Fbxl18	AI427077|B130019G13Rik|C330021B20Rik	F-box and leucine-rich repeat protein 18	protein-coding
common_peak2-29965-26-20-0.535581669379702-0.738267116931592	chr6	119332632	119333347	+	0	NA	intron (NM_197985, intron 1 of 7)	RLTR22_Mur|LTR|ERVK	34512	NM_197985	68465	Mm.291826	NM_197985	ENSMUSG00000030168	Adipor2	1110001I14Rik|ADCR2|AI115388|AW554121|D6Ucla1e|Paqr2	adiponectin receptor 2	protein-coding
common_peak2-21616-4-6--0.830815435910851-0.989110657569874	chr11	100618687	100619063	+	0	NA	intron (NM_001081194, intron 2 of 16)	intron (NM_001081194, intron 2 of 16)	2217	NM_001081194	380728	Mm.297539	NM_001081194	ENSMUSG00000035355	Kcnh4	BEC2	potassium voltage-gated channel, subfamily H (eag-related), member 4	protein-coding
common_peak2-29288-12-14--0.25811461052088-0.309074325783021	chr5	143732570	143733021	+	0	NA	intron (NM_007984, intron 4 of 4)	B1_Mur4|SINE|Alu	10761	NM_007984	14086	Mm.289707	NM_007984	ENSMUSG00000029581	Fscn1	AI663989|Fan1|fascin-1	fascin homolog 1, actin bundling protein (Strongylocentrotus purpuratus)	protein-coding
common_peak1-14299-19-11-0.81772482594053-0.991115276827166	chr2	158522520	158523307	+	0	NA	intron (NM_153089, intron 2 of 10)	MIRb|SINE|MIR	30042	NM_001159662	228852	Mm.150540	NM_153089	ENSMUSG00000037754	Ppp1r16b	ANKRD4|C130078N17Rik|TIMAP|Wdt4	protein phosphatase 1, regulatory (inhibitor) subunit 16B	protein-coding
unique_peak1-5364-8-4-0.683294323060208-1.21878474469819	chr5	92978430	92978877	+	0	NA	Intergenic	RLTR6-int|LTR|ERV1	-21910	NM_001033478	384198	Mm.76757	NM_001033478	ENSMUSG00000057068	Fam47e	C730043O17|Gm1381	family with sequence similarity 47, member E	protein-coding
unique_peak1-5382-8-3-1.00522241794757-1.39487600375387	chr5	100416476	100417004	+	0	NA	Intergenic	MMERVK10C-int|LTR|ERVK	-8783	NM_001077265	11991	Mm.150231	NM_007516		Hnrnpd	Auf1|Hnrpd	heterogeneous nuclear ribonucleoprotein D	protein-coding
unique_peak2-33745-3-6--1.22133801201688-1.08602067057793	chr11	117086794	117087217	+	0	NA	intron (NM_001113486, intron 2 of 11)	intron (NM_001113486, intron 2 of 11)	26030	NM_001113486	53860	Mm.38450	NM_017380	ENSMUSG00000059248	Sept9	MSF1|Msf|PNUTL4|Sint1	septin 9	protein-coding
unique_peak2-39418-2-8--2.08737925770563-1.65811743852845	chr9	41113375	41113669	+	0	NA	Intergenic	RSINE1|SINE|B4	-71122	NR_040725	73144	Mm.482850	NR_040725		3110039I08Rik	-	RIKEN cDNA 3110039I08 gene	ncRNA
common_peak1-16999-24-9-1.47128180788035-2.52428350728854	chr6	88925448	88926350	+	0	NA	Intergenic	Intergenic	73654	NM_011906	24100	Mm.284480	NM_011906	ENSMUSG00000002871	Tpra1	40kDa|Gpr175|Tpra40	transmembrane protein, adipocyte asscociated 1	protein-coding
common_peak1-15232-10-4-1.03448725012141-1.5150158574804	chr4	4613978	4614426	+	0	NA	Intergenic	RLTR9C|LTR|ERVK	106251	NM_177730	242291	Mm.218889	NM_177730		Impad1	1110001C20Rik|AA408880|AI451589|AL022796|B230207P20|Jaws|gPAPP	inositol monophosphatase domain containing 1	protein-coding
unique_peak1-5021-10-4-1.03448725012141-1.5150158574804	chr4	129262997	129263562	+	0	NA	Intergenic	Intergenic	-7455	NM_182783	230766	Mm.20377	NM_182783	ENSMUSG00000050493	Fam167b	SEC	family with sequence similarity 167, member B	protein-coding
common_peak1-12611-27-42--0.434718803806862-0.595371917655149	chr18	31609223	31610093	+	0	NA	Intergenic	Lx5|LINE|L1	-2589	NM_009308	20983	Mm.233846	NM_009308	ENSMUSG00000024261	Syt4	SytIV	synaptotagmin IV	protein-coding
common_peak2-28234-73-108--0.0757893183517044-0.326760750174164	chr4	120824979	120825822	+	0	NA	intron (NM_001081013, intron 5 of 5)	B1_Mur3|SINE|Alu	35739	NM_001081013	109263	Mm.215745	NM_001081013	ENSMUSG00000049878	Rlf	9230110M18Rik|AI195322|MommeD8	rearranged L-myc fusion sequence	protein-coding
common_peak1-19029-26-17-0.75797409071615-1.09210977391291	chr9	64049523	64050806	+	0	NA	intron (NM_008927, intron 5 of 10)	Lx5|LINE|L1	23060	NM_183316	330959	Mm.24082	NM_183316	ENSMUSG00000032398	Snapc5	2010103A03Rik	small nuclear RNA activating complex, polypeptide 5	protein-coding
unique_peak2-36500-6-12--1.13504160776079-1.45089835786865	chr2	156180386	156180988	+	0	NA	intron (NM_027585, intron 9 of 12)	(GA)n|Simple_repeat|Simple_repeat	38028	NR_024329	347740	Mm.324242	NR_024329		2900097C17Rik	1810005K14Rik|4930563C06Rik	RIKEN cDNA 2900097C17 gene	ncRNA
common_peak2-30649-21-31--0.430510734733764-0.49501414494053	chr7	98815514	98816476	+	0	NA	intron (NM_011807, intron 2 of 22)	intron (NM_011807, intron 2 of 22)	-394909	NM_001243046	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
common_peak1-18633-18-24--0.330937038546373-0.380101753845076	chr8	110919786	110920643	+	0	NA	Intergenic	MER20|DNA|MER1_type	188363	NR_077224	109215	Mm.65282	NR_077224		3010033K07Rik	-	RIKEN cDNA 3010033K07 gene	ncRNA
common_peak2-26889-20-24--0.155781405183531-0.319918318021793	chr2	157446779	157447679	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-55132	NM_016916	53619	Mm.480461	NM_016916	ENSMUSG00000067787	Blcap	AI462828|Bc10	bladder cancer associated protein homolog (human)	protein-coding
common_peak2-26948-41-63--0.29885129515134-0.529856340941694	chr2	164562050	164564020	+	0	NA	intron (NM_027961, intron 1 of 3)	intron (NM_027961, intron 1 of 3)	5732	NM_027961	71856	Mm.330770	NM_027961	ENSMUSG00000076434	Wfdc3	1700015L13Rik|1700127F16Rik	WAP four-disulfide core domain 3	protein-coding
common_peak1-10126-13-8-0.608547029195456-0.660903317613904	chr13	32904515	32905307	+	0	NA	intron (NM_030215, intron 3 of 6)	intron (NM_030215, intron 3 of 6)	11012	NM_030215	78903	Mm.286680	NM_030215	ENSMUSG00000021400	Wrnip1	4833444L21Rik|WHIP|Wrnip	Werner helicase interacting protein 1	protein-coding
common_peak1-9196-26-23-0.342936591437306-0.502376547007663	chr11	80141544	80142471	+	0	NA	intron (NM_139228, intron 4 of 8)	L1MB3|LINE|L1	27593	NM_139228	246104	Mm.194148	NM_139228	ENSMUSG00000017692	Rhbdl3	AI847581|Rhbdl4|Rhomr1|Vrho	rhomboid, veinlet-like 3 (Drosophila)	protein-coding
common_peak1-11228-106-99-0.693910665230995-3.63600306973533	chr15	79367485	79370143	+	0	NA	intron (NM_001040187, intron 8 of 12)	intron (NM_001040187, intron 8 of 12)	-5467	NM_152806	67040	Mm.29644	NM_152806	ENSMUSG00000055065	Ddx17	2610007K22Rik|A430025E01Rik|AI047725|C80929|Gm926|p72	DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	protein-coding
unique_peak1-6609-15-4-1.69023665566829-1.97518968347063	chr8	104841165	104841842	+	0	NA	Intergenic	L1Md_F2|LINE|L1	467508	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
unique_peak2-33703-9-15--0.81038659359578-0.630231561310125	chr11	108343846	108344523	+	0	NA	intron (NM_029606, intron 7 of 27)	RSINE1|SINE|B4	57604	NM_029606	76380	Mm.344071	NM_029586	ENSMUSG00000020728	Cep112	1700001M19Rik|1700029K01Rik|8430407H02Rik|AV043680|AV207351|Ccdc46|Macoco	centrosomal protein 112	protein-coding
common_peak2-25269-6-7--0.434601889619698-0.97990265578305	chr18	67932784	67933246	+	0	NA	Intergenic	B1_Mur4|SINE|Alu	-1515	NM_028112	72124	Mm.307315	NM_028112	ENSMUSG00000079614	Seh1l	2610007A16Rik|AW540070|SEC13L|SEH1A|SEH1B|Seh1	SEH1-like (S. cerevisiae	protein-coding
common_peak1-10974-18-17-0.142994149786039-0.353907621462753	chr15	28158845	28159542	+	0	NA	intron (NM_133365, intron 3 of 78)	intron (NM_133365, intron 3 of 78)	25672	NM_133365	110082	Mm.248464	NM_133365	ENSMUSG00000022262	Dnah5	AU022615|Dnahc5|Mdnah5|b2b1134Clo|b2b1154Clo|b2b1537Clo|b2b1565Clo|b2b601Clo|mKIAA1603	dynein, axonemal, heavy chain 5	protein-coding
unique_peak2-37735-12-26--1.10611151707583-1.26025077975594	chr5	109906660	109907783	+	0	NA	Intergenic	MurSatRep1|Unknown|Unknown	58189	NM_001104628	384221	Mm.469879	NM_001104628	ENSMUSG00000091879	Vmn2r17	EG384221	vomeronasal 2, receptor 17	protein-coding
unique_peak2-34435-8-12--0.695217300193522-0.475924844171029	chr14	20891484	20892058	+	0	NA	Intergenic	Lx|LINE|L1	10623	NM_026209	67509	Mm.292423	NM_026209	ENSMUSG00000045107	Saysd1	1810063B07Rik|4930488P03Rik	SAYSVFN motif domain containing 1	protein-coding
common_peak1-13595-8-12--0.695217300193522-0.475924844171029	chr2	18056085	18056579	+	0	NA	intron (NR_045538, intron 8 of 22)	B3|SINE|B2	70120	NM_001252561	17354	Mm.209175	NM_010804	ENSMUSG00000026743	Mllt10	Af10|B130021D15Rik|D630001B22Rik|mKIAA4140	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	protein-coding
common_peak2-19717-9-7-0.18961340640422-1.05908390183068	chr1	66701116	66701500	+	0	NA	intron (NM_175510, intron 51 of 64)	intron (NM_175510, intron 51 of 64)	-46159	NM_025683	66646	Mm.240912	NM_025683	ENSMUSG00000026005	Rpe	2810429B02Rik|5730518J08Rik	ribulose-5-phosphate-3-epimerase	protein-coding
unique_peak1-766-6-3-0.565398110380302-1.08602067057793	chr10	121961304	121961734	+	0	NA	Intergenic	Intergenic	45428	NR_040616	319272	Mm.411763	NR_040616		A130077B15Rik	-	RIKEN cDNA A130077B15 gene	ncRNA
common_peak2-28171-20-53--1.26681271757228-3.16860498301544	chr4	108833178	108833853	+	0	NA	intron (NM_133885, intron 2 of 22)	intron (NM_133885, intron 2 of 22)	41362	NM_133885	100273	Mm.366315	NM_133885	ENSMUSG00000028559	Osbpl9	2600011I06Rik|AU015843|Orp-9	oxysterol binding protein-like 9	protein-coding
common_peak2-26379-17-16-0.130833496954699-0.356936432242225	chr2	46442546	46443082	+	0	NA	Intergenic	L1_Mus2|LINE|L1	890689	NR_040497	69405	Mm.396184	NR_040497	ENSMUSG00000086202	1700019E08Rik	-	RIKEN cDNA 1700019E08 gene	ncRNA
common_peak1-15620-14-10-0.439784541720347-0.519648556297791	chr4	133338556	133339267	+	0	NA	Intergenic	MTD|LTR|MaLR	-29385	NM_001080819	93760	Mm.22478	NM_001080819	ENSMUSG00000007880	Arid1a	1110030E03Rik|BAF250a|Osa1|Smarcf1	AT rich interactive domain 1A (SWI-like)	protein-coding
unique_peak2-33655-1-8--2.79698201165906-2.05605744720049	chr11	99850912	99851475	+	0	NA	Intergenic	Intergenic	-3286	NM_001256057	100504183	Mm.426560	NM_001256057	ENSMUSG00000078253	Gm11570	Krtap16-1|OTTMUSG00000002209	predicted gene 11570	protein-coding
common_peak1-12323-28-34--0.0763238971235038-0.304271119602326	chr17	47923840	47924865	+	0	NA	intron (NM_001161722, intron 4 of 8)	MIRb|SINE|MIR	1659	NM_011549	21425	Mm.2305	NM_011549	ENSMUSG00000023990	Tfeb	Tcfeb|bHLHe35	transcription factor EB	protein-coding
common_peak1-8628-10-9-0.0344872501214071-1.05503135781948	chr10	120227117	120227567	+	0	NA	intron (NM_177092, intron 6 of 6)	ORR1A2|LTR|MaLR	24554	NR_038003	70874	Mm.427286	NR_038000	ENSMUSG00000044544	4921513I03Rik	-	RIKEN cDNA 4921513I03 gene	ncRNA
unique_peak1-5571-9-3-1.18961340640422-1.57096726280955	chr5	148373812	148374287	+	0	NA	3' UTR (NM_010228, exon 30 of 30)	3' UTR (NM_010228, exon 30 of 30)	131893	NM_028291	72587	Mm.320469	NM_028291	ENSMUSG00000029647	Pan3	2700050F09Rik|A430027N15Rik|AU014670	PAN3 polyA specific ribonuclease subunit homolog (S. cerevisiae)	protein-coding
unique_peak2-33963-2-6--1.72480917832092-1.26211192963361	chr12	80375092	80375456	+	0	NA	intron (NM_001008550, intron 16 of 41)	intron (NM_001008550, intron 16 of 41)	21995	NM_001008550	211978	Mm.297919	NM_001008550	ENSMUSG00000066440	Zfyve26	4930465A13|9330197E15Rik|A630028O16Rik|Gm893|mKIAA0321	zinc finger, FYVE domain containing 26	protein-coding
unique_peak1-1092-8-3-1.00522241794757-1.39487600375387	chr11	88525063	88525545	+	0	NA	intron (NM_054043, intron 5 of 13)	intron (NM_054043, intron 5 of 13)	54239	NM_054043	76626	Mm.400451	NM_054043	ENSMUSG00000069769	Msi2	1700105C15Rik|AI451722|AI563628|AW489193|Msi2h	musashi RNA-binding protein 2	protein-coding
common_peak1-11303-12-1-2.64877598508764-3.36932189928148	chr15	83575810	83576393	+	0	NA	Intergenic	B4A|SINE|B4	-20632	NM_022723	64706	Mm.40393	NM_022723	ENSMUSG00000016763	Scube1	7330410C13Rik|A630023E24Rik	signal peptide, CUB domain, EGF-like 1	protein-coding
unique_peak2-36961-2-6--1.72480917832092-1.26211192963361	chr3	109255181	109255554	+	0	NA	intron (NM_020505, intron 2 of 26)	intron (NM_020505, intron 2 of 26)	111766	NM_020505	57257	Mm.282257	NM_020505	ENSMUSG00000033721	Vav3	A530094I06Rik|AA986410|Idd18.1	vav 3 oncogene	protein-coding
unique_peak1-6664-12-9-0.326847890200276-0.459837087125828	chr8	18679301	18680007	+	0	NA	intron (NM_173189, intron 11 of 13)	MTC|LTR|MaLR	61908	NM_007426	11601	Mm.439874	NM_007426	ENSMUSG00000031465	Angpt2	Agpt2|Ang-2|Ang2	angiopoietin 2	protein-coding
unique_peak2-37340-4-13--1.83081543591085-2.04196296489515	chr4	132048505	132049238	+	0	NA	3' UTR (NM_144907, exon 10 of 10)	3' UTR (NM_144907, exon 10 of 10)	17500	NM_144907	230784	Mm.23608	NM_144907		Sesn2	HI95|SEST2|Ses2	sestrin 2	protein-coding
common_peak1-17242-9-10--0.269818212233077-1.05503135781948	chr6	128437894	128438351	+	0	NA	intron (NM_007376, intron 29 of 35)	intron (NM_007376, intron 29 of 35)	38616	NM_007376	11287	Mm.260144	NM_007376	ENSMUSG00000030359	Pzp	A1m|A2m|AI893533|MAM	pregnancy zone protein	protein-coding
common_peak2-22403-13-14--0.12841856497075-0.301029995663977	chr13	33951708	33952330	+	0	NA	Intergenic	Intergenic	-16742	NM_001045535	435350	Mm.263418	NM_001045535	ENSMUSG00000069248	Serpinb6e	Gm11396|OTTMUSG00000000720|SPI3B|ovalbumin	serine (or cysteine) peptidase inhibitor, clade B, member 6e	protein-coding
common_peak2-22447-20-15-0.488074784591193-0.590343908676236	chr13	41365969	41366707	+	0	NA	intron (NM_001135577, intron 1 of 1)	intron (NM_001135577, intron 1 of 1)	21125	NM_001135577	108934	Mm.38578	NM_001135577	ENSMUSG00000091264	Smim13	2900036K02Rik	small integral membrane protein 13	protein-coding
common_peak2-27322-50-67--0.0465225247713867-0.302662697069732	chr3	65973765	65975319	+	0	NA	intron (NM_145820, intron 7 of 13)	intron (NM_145820, intron 7 of 13)	-49267	NM_008987	19288	Mm.276776	NM_008987	ENSMUSG00000027832	Ptx3	AI607804|TSG-14	pentraxin related gene	protein-coding
common_peak1-18525-35-24-0.78751406868778-1.48724131519612	chr8	92362961	92364346	+	0	NA	Intergenic	L1MC2|LINE|L1	508498	NM_172913	244579	Mm.302755	NM_172913	ENSMUSG00000043668	Tox3	500-9|BC052044|C230068E13|CAGF9|Tnrc9	TOX high mobility group box family member 3	protein-coding
common_peak2-27599-33-26-0.576450060362061-0.950816664083185	chr3	103019564	103020483	+	0	NA	Intergenic	Intergenic	44389	NM_026602	68183	Mm.104919	NM_026602	ENSMUSG00000005687	Bcas2	6430539P16Rik|AI132645|C76366|C80030	breast carcinoma amplified sequence 2	protein-coding
unique_peak2-35238-8-17--1.16470258349474-1.02063122982878	chr16	92698356	92698811	+	0	NA	intron (NM_001111022, intron 2 of 6)	CpG	-1009	NM_009821	12394	Mm.4081	NM_009821	ENSMUSG00000022952	Runx1	AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b	runt related transcription factor 1	protein-coding
common_peak2-24857-12-7-0.648775985087639-0.697979855752659	chr17	78388599	78388912	+	0	NA	Intergenic	Intergenic	-210833	NM_015800	50766	Mm.311912	NM_015800	ENSMUSG00000024074	Crim1	AU015004	cysteine rich transmembrane BMP regulator 1 (chordin like)	protein-coding
unique_peak2-35871-7-12--0.901348887842903-1.31827279259406	chr18	79270476	79270872	+	0	NA	intron (NM_053099, intron 2 of 5)	intron (NM_053099, intron 2 of 5)	35456	NM_053099	240427	Mm.312871	NM_053099	ENSMUSG00000024548	Setbp1	C130092E12|Seb|mKIAA0437	SET binding protein 1	protein-coding
common_peak2-26140-18-15-0.312919151228352-0.456667090758524	chr2	13413482	13414181	+	0	NA	promoter-TSS (NM_001081084)	promoter-TSS (NM_001081084)	-328	NM_001081084	65969	Mm.313915	NM_001081084	ENSMUSG00000026726	Cubn	AA408369|AL022750|D2Wsu88e	cubilin (intrinsic factor-cobalamin receptor)	protein-coding
common_peak1-13680-10-13--0.450939577048835-0.386243247519795	chr2	29125310	29125838	+	0	NA	Intergenic	Lx|LINE|L1	-17061	NR_029460	76220	Mm.330108	NR_029460		6530402F18Rik	mKIAA1857	RIKEN cDNA 6530402F18 gene	ncRNA
common_peak2-23812-20-18-0.240147271147608-0.388034239052786	chr15	100687272	100688050	+	0	NA	Intergenic	B1F|SINE|Alu	-13415	NM_001077499	20273	Mm.385012	NM_011323	ENSMUSG00000023033	Scn8a	AI853486|C630029C19Rik|NaCh6|Nav1.6|dmu|med|mnd-2|mnd2|nmf2|nmf335|nmf58|nur14|seal	sodium channel, voltage-gated, type VIII, alpha	protein-coding
common_peak1-10391-46-65--0.146398176109652-0.344471032458745	chr13	96670248	96671668	+	0	NA	Intergenic	Intergenic	-9081	NM_027711	544963	Mm.38878	NM_027711	ENSMUSG00000021676	Iqgap2	4933417J23Rik|A630053O10|AI788777	IQ motif containing GTPase activating protein 2	protein-coding
unique_peak1-4745-7-4-0.477162735410827-1.09384600808989	chr3	108778856	108779392	+	0	NA	intron (NM_001163567, intron 10 of 10)	intron (NM_001163567, intron 10 of 10)	35649	NM_001078646	66715	Mm.158124	NM_025723	ENSMUSG00000045662	Henmt1	4921515J06Rik|Hen1|mHEN1	HEN1 methyltransferase homolog 1 (Arabidopsis)	protein-coding
unique_peak1-4120-8-5-0.420259917226415-1.10484139239135	chr2	85062870	85063523	+	0	NA	Intergenic	Intergenic	-26340	NM_001033346	241528	Mm.291095	NM_001033346	ENSMUSG00000075224	Lrrc55	A330097E02Rik|Gm351	leucine rich repeat containing 55	protein-coding
unique_peak2-34119-8-19--1.31670567693979-1.30305656033811	chr13	21765477	21766191	+	0	NA	TTS (NM_146543)	TTS (NM_146543)	977	NM_001011820	258067	Mm.453831	NM_001011820	ENSMUSG00000096404	Olfr1359	MOR256-35|MOR256-60	olfactory receptor 1359	protein-coding
unique_peak2-33452-6-7--0.434601889619698-0.97990265578305	chr11	64000318	64000741	+	0	NA	Intergenic	Intergenic	107543	NR_033780	66456	Mm.124828	NR_033780	ENSMUSG00000087497	2810001G20Rik	AW045514	RIKEN cDNA 2810001G20 gene	ncRNA
common_peak2-29128-11-17--0.661231417190699-0.58239619684445	chr5	124327568	124328023	+	0	NA	3' UTR (NM_175520, exon 1 of 1)	3' UTR (NM_175520, exon 1 of 1)	2234	NM_175520	243270	Mm.33362	NM_175520	ENSMUSG00000049241	Hcar1	Gpr81	hydrocarboxylic acid receptor 1	protein-coding
common_peak1-19362-142-169-0.435931324432918-2.33406825033719	chrX	13279696	13282289	+	0	NA	intron (NM_001284503, intron 3 of 26)	intron (NM_001284503, intron 3 of 26)	42503	NM_175669	319200	Mm.383294	NM_175669	ENSMUSG00000047678	Gpr82	-	G protein-coupled receptor 82	protein-coding
common_peak1-13933-10-23--1.22854715571239-1.44380006500971	chr2	86020223	86020817	+	0	NA	TTS (NM_146583)	TTS (NM_146583)	1746	NM_146583	18352	Mm.222842	NM_146583	ENSMUSG00000075199	Olfr52	IE6|MOR185-6|ORL446	olfactory receptor 52	protein-coding
unique_peak1-2343-13-3-1.77847203063777-2.58603100924543	chr15	85421087	85421593	+	0	NA	intron (NR_040433, intron 3 of 4)	intron (NR_040433, intron 3 of 4)	-9089	NM_009528	22422	Mm.306946	NM_009528	ENSMUSG00000022382	Wnt7b	Wnt-7b	wingless-type MMTV integration site family, member 7B	protein-coding
unique_peak1-3283-10-2-1.77145284428761-2.09384600808989	chr18	74475045	74475551	+	0	NA	intron (NR_029424, intron 7 of 8)	Lx8|LINE|L1	32544	NM_028948	74453	Mm.182293	NM_028948	ENSMUSG00000035394	Ccdc11	4933415I03Rik	coiled-coil domain containing 11	protein-coding
common_peak2-21364-3-8--1.58390809140159-1.39487600375387	chr11	78182743	78183201	+	0	NA	intron (NM_008238, intron 3 of 8)	intron (NM_008238, intron 3 of 8)	17138	NM_008238	15218	Mm.4496	NM_008238	ENSMUSG00000002057	Foxn1	D11Bhm185e|Fkh19|HFH-11|Hfh11|Whn|nu|nude	forkhead box N1	protein-coding
common_peak1-11839-39-55--0.19159367513845-0.376238101225462	chr16	87353968	87354620	+	0	NA	promoter-TSS (NM_001159331)	promoter-TSS (NM_001159331)	-136	NM_001159331	67768	Mm.296532	NM_026366	ENSMUSG00000044442	N6amt1	5830445C04Rik|Hemk2|Pred28	N-6 adenine-specific DNA methyltransferase 1 (putative)	protein-coding
unique_peak2-35917-5-7--0.704380336005853-1.01466476204226	chr19	5798499	5798866	+	0	NA	non-coding (NR_002847, exon 1 of 1)	non-coding (NR_002847, exon 1 of 1)	3989	NR_002847	72289	Mm.298256	NR_002847	ENSMUSG00000092341	Malat1	2210401K01Rik|9430072K23Rik|AI647968|Neat2	metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)	ncRNA
common_peak2-21462-9-22--1.33394854965279-1.52222891542741	chr11	87109272	87109791	+	0	NA	intron (NM_177167, intron 1 of 6)	MTE-int|LTR|MaLR	62965	NM_177167	320472	Mm.341988	NM_177167	ENSMUSG00000046442	Ppm1e	AW049266|B930008A12Rik|POPX1|PP2CH|mKIAA1072	protein phosphatase 1E (PP2C domain containing)	protein-coding
unique_peak2-34938-6-12--1.13504160776079-1.45089835786865	chr15	87664704	87665329	+	0	NA	Intergenic	Intergenic	-38643	NR_105817	102465209		NR_105817	miRBase:MI0021927	Mir6393	mmu-mir-6393	microRNA mir-6393	ncRNA
common_peak2-21753-9-6-0.382258484346616-1.11707584880836	chr11	115970074	115970497	+	0	NA	intron (NM_001205081, intron 1 of 5)	intron (NM_001205081, intron 1 of 5)	1264	NM_001205081	217333	Mm.347770	NM_172570	ENSMUSG00000020773	Trim47	2210023F24Rik	tripartite motif-containing 47	protein-coding
unique_peak1-6152-14-1-2.89921616035764-3.91338994363176	chr6	135559150	135559774	+	0	NA	Intergenic	B1F|SINE|Alu	241951	NM_001288627	13730	Mm.182785	NM_010128	ENSMUSG00000030208	Emp1	I-8-09|TMP	epithelial membrane protein 1	protein-coding
common_peak1-9443-20-8-1.31814978314888-1.77631109801764	chr11	102642762	102643614	+	0	NA	Intergenic	Intergenic	20435	NM_001110778	11488	Mm.89854	NM_009613	ENSMUSG00000020926	Adam11	AW060611|Mdc	a disintegrin and metallopeptidase domain 11	protein-coding
unique_peak1-1212-11-2-1.92373108353046-2.32232533660526	chr11	106658431	106658949	+	0	NA	intron (NM_177088, intron 4 of 19)	intron (NM_177088, intron 4 of 19)	8124	NM_001166685	320162	Mm.30524	NM_177088	ENSMUSG00000018372	Cep95	4732496G21Rik|AI118346|AI448335|Ccdc45|D330027A14Rik|F630025I20Rik	centrosomal protein 95	protein-coding
unique_peak2-38572-9-8-0.0196884049619079-1.03275496310833	chr7	66439306	66439792	+	0	NA	Intergenic	L1_Mur2|LINE|L1	-44571	NM_173010	22215	Mm.9002	NM_011668	ENSMUSG00000025326	Ube3a	4732496B02|5830462N02Rik|A130086L21Rik|Hpve6a|mKIAA4216	ubiquitin protein ligase E3A	protein-coding
unique_peak1-994-12-4-1.32684789020028-2.04196296489515	chr11	69845326	69845986	+	0	NA	intron (NM_001109752, intron 8 of 19)	B1_Mur4|SINE|Alu	13549	NM_007864	13385	Mm.27256	NM_007864	ENSMUSG00000020886	Dlg4	Dlgh4|PSD-95|PSD95|SAP90|SAP90A	discs, large homolog 4 (Drosophila)	protein-coding
unique_peak2-36936-4-10--1.48289213249054-1.5150158574804	chr3	103241832	103242346	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	-137116	NM_001276679	54524	Mm.88818	NM_018800	ENSMUSG00000027849	Syt6	3110037A08Rik|AW048930|sytVI	synaptotagmin VI	protein-coding
common_peak1-14329-11-14--0.398197011356905-0.379391706698377	chr2	164070665	164071224	+	0	NA	Intergenic	Intergenic	-6867	NM_017390	53878	Mm.99395	NM_017390	ENSMUSG00000040132	Svs2	BB115391|Semg1|SvsII	seminal vesicle secretory protein 2	protein-coding
unique_peak2-36022-3-6--1.22133801201688-1.08602067057793	chr19	41980796	41981128	+	0	NA	Intergenic	Intergenic	-5399	NM_023418	18648	Mm.391589	NM_023418	ENSMUSG00000011752	Pgam1	2310050F24Rik|Pgam-1	phosphoglycerate mutase 1	protein-coding
common_peak2-28320-23-25-0.0213277863679888-0.30528805757448	chr4	133632546	133633542	+	0	NA	intron (NM_001162970, intron 5 of 19)	ID_B1|SINE|B4	8677	NM_001162970	230806	Mm.240080	NM_001162970	ENSMUSG00000012123	Aim1l	-	absent in melanoma 1-like	protein-coding
common_peak2-27633-41-89--0.790704391481015-2.43424896028355	chr3	106546993	106548632	+	0	NA	Intergenic	L1Md_F2|LINE|L1	23212	NM_001286685	321000	Mm.259638	NM_028081	ENSMUSG00000056260	Lrif1	2010012G17Rik|4933421E11Rik|AI450568	ligand dependent nuclear receptor interacting factor 1	protein-coding
common_peak1-17730-21-22-0.0459273092092225-0.319918318021793	chr7	80370703	80371584	+	0	NA	Intergenic	RMER1B|Other|Other	-84123	NR_105062	100505025	Mm.445959	NR_105062		LOC100505025	-	uncharacterized LOC100505025	ncRNA
unique_peak1-3682-11-4-1.18676548936425-1.68134727924692	chr19	42143988	42144406	+	0	NA	intron (NM_026152, intron 6 of 6)	intron (NM_026152, intron 6 of 6)	16663	NM_198108	226123	Mm.259441	NM_198108	ENSMUSG00000049670	Morn4	-	MORN repeat containing 4	protein-coding
unique_peak1-2843-8-0-3.00522241794757-2.70926996097583	chr17	29062550	29063116	+	0	NA	Intergenic	Intergenic	-10564	NM_172450	207819	Mm.248931	NM_172450	ENSMUSG00000048905	4930539E08Rik	9130014G02	RIKEN cDNA 4930539E08 gene	protein-coding
common_peak2-29818-12-11-0.0638134843664826-0.337263207250336	chr6	91472938	91473430	+	0	NA	TTS (NM_026309)	TTS (NM_026309)	7155	NM_026309	67678	Mm.246693	NM_026309	ENSMUSG00000034192	Lsm3	1010001J12Rik|2610005D18Rik|6030401D18Rik|SMX4|USS2	LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)	protein-coding
unique_peak1-2739-9-4-0.867685311516858-1.36011389749466	chr16	97715238	97715666	+	0	NA	intron (NM_020622, intron 2 of 7)	intron (NM_020622, intron 2 of 7)	11091	NM_020622	52793	Mm.327932	NM_020622	ENSMUSG00000022938	Fam3b	2-21|9030624C24Rik|D16Jhu19e|ORF9|Pander	family with sequence similarity 3, member B	protein-coding
unique_peak2-38960-2-7--1.91745425626332-1.45399745587252	chr8	32008377	32008729	+	0	NA	Intergenic	L1MC5|LINE|L1	-191581	NM_025869	66959	Mm.23916	NM_025869	ENSMUSG00000039661	Dusp26	2310043K02Rik|Skrp3	dual specificity phosphatase 26 (putative)	protein-coding
common_peak2-27264-30-21-0.710243790854576-1.16836819221353	chr3	57268264	57269302	+	0	NA	intron (NM_133784, intron 4 of 6)	RLTR16|LTR|ERVK	39451	NM_145539	229302	Mm.26618	NM_145539	ENSMUSG00000027801	Tm4sf4	Iltmp	transmembrane 4 superfamily member 4	protein-coding
common_peak2-25469-26-21-0.468467473521165-0.647723624534446	chr19	4397417	4398119	+	0	NA	promoter-TSS (NM_001001984)	promoter-TSS (NM_001001984)	-691	NM_001001984	225876	Mm.31941	NM_001001984	ENSMUSG00000054611	Kdm2a	100043628|5530401A10Rik|AA589516|AW536790|Cxxc8|Fbl11|Fbl7|Fbxl11|Gm4560|Jhdm1|Jhdm1a|lalina	lysine (K)-specific demethylase 2A	protein-coding
unique_peak1-7152-9-3-1.18961340640422-1.57096726280955	chr9	57940250	57940626	+	0	NA	intron (NM_001166282, intron 4 of 19)	intron (NM_001166282, intron 4 of 19)	9594	NM_029212	382077	Mm.335193	NM_029212	ENSMUSG00000037716	Ccdc33	4930535E21Rik|Gm1117|Tzip1	coiled-coil domain containing 33	protein-coding
unique_peak1-4094-11-1-2.50869358425161-2.83420869758413	chr2	72297722	72298223	+	0	NA	Intergenic	MERVL-int|LTR|ERVL	-16304	NM_025866	66953	Mm.270676	NM_025866	ENSMUSG00000055612	Cdca7	2310021G01Rik|AU044109|JPO1	cell division cycle associated 7	protein-coding
common_peak1-12905-26-57--0.93008190296911-2.15096905553243	chr18	84084997	84086014	+	0	NA	Intergenic	Intergenic	170449	NM_001081300	110796	Mm.102136	NM_001081300	ENSMUSG00000046982	Tshz1	5730407I04Rik|D18Bwg1409e|Mtsh1|NY-CO-33|Sdccag33|Tsh1|mKIAA4206|teashirt1	teashirt zinc finger family member 1	protein-coding
common_peak1-18580-31-31-0.225238670813123-0.416139936131877	chr8	106010300	106011569	+	0	NA	Intergenic	Intergenic	-116765	NR_045730	71058	Mm.67707	NR_045730		4933400L20Rik	-	RIKEN cDNA 4933400L20 gene	ncRNA
common_peak2-21810-22-10-1.18785248645011-1.74319850844462	chr11	118430762	118431388	+	0	NA	intron (NM_001285436, intron 3 of 13)	CpG	92801	NM_172573	217364	Mm.473963	NM_172573	ENSMUSG00000033857	Engase	C130099A03|D230014K01Rik	endo-beta-N-acetylglucosaminidase	protein-coding
common_peak1-15574-46-60--0.0327413943140851-0.301029995663994	chr4	126967282	126968512	+	0	NA	Intergenic	MIRb|SINE|MIR	23386	NM_008120	14612	Mm.24615	NM_008120	ENSMUSG00000050234	Gja4	AU020209|AW558810|Cnx37|Cx37|Gja-4	gap junction protein, alpha 4	protein-coding
common_peak2-20854-56-111--0.571759096618361-1.82364696432849	chr11	78362824	78365227	+	0	NA	intron (NM_133706, intron 1 of 2)	CpG	212	NM_133706	69071	Mm.29431	NM_133706	ENSMUSG00000037278	Tmem97	1810014L12Rik|AI115531|AL022956|D11Bhm182e	transmembrane protein 97	protein-coding
unique_peak2-36032-8-6-0.197867495889966-1.03789460276074	chr19	43523356	43523786	+	0	NA	intron (NM_031396, intron 1 of 10)	B3A|SINE|B2	8645	NM_031396	83674	Mm.329864	NM_031396	ENSMUSG00000025189	Cnnm1	AI846314|Acdp1|CLP-1	cyclin M1	protein-coding
common_peak2-25603-17-15-0.218296338205038-0.403453972741633	chr19	8871581	8872144	+	0	NA	exon (NM_026329, exon 3 of 8)	exon (NM_026329, exon 3 of 8)	1185	NM_026329	67710	Mm.22117	NM_026329	ENSMUSG00000071662	Polr2g	2410046K11Rik|A230108L04Rik|C76415|RBP7|Rpo2-7l	polymerase (RNA) II (DNA directed) polypeptide G	protein-coding
common_peak1-16179-26-34--0.201383924786504-0.35535220421655	chr5	91139087	91140315	+	0	NA	Intergenic	B1_Mur3|SINE|Alu	-48623	NM_009141	20311	Mm.4660	NM_009141	ENSMUSG00000029371	Cxcl5	AMCF-II|ENA-78|GCP-2|LIX|Scyb5|Scyb6	chemokine (C-X-C motif) ligand 5	protein-coding
common_peak2-28699-8-7-0.00522241794757061-1.00793137938329	chr5	34169759	34170190	+	0	NA	Intergenic	AT_rich|Low_complexity|Low_complexity	-15787	NM_175231	107823	Mm.19892	NM_175231	ENSMUSG00000057406	Whsc1	5830445G22Rik|9430010A17Rik|AW555663|C130020C13Rik|D030027O06Rik|D930023B08Rik|MMSET|NSD2|Whsc1l|mKIAA1090	Wolf-Hirschhorn syndrome candidate 1 (human)	protein-coding
common_peak2-26390-43-60--0.148174152039184-0.348250801558508	chr2	52072487	52073697	+	0	NA	intron (NM_010889, intron 85 of 156)	intron (NM_010889, intron 85 of 156)	-73430	NR_040620	78049	Mm.243883	NR_040620		4930573O16Rik	-	RIKEN cDNA 4930573O16 gene	ncRNA
common_peak1-13768-41-31-0.70114870484866-1.46742434643227	chr2	35461556	35463038	+	0	NA	intron (NM_001290637, intron 1 of 16)	intron (NM_001290637, intron 1 of 16)	-15204	NM_001290641	69601	Mm.29629	NM_001001602	ENSMUSG00000026883	Dab2ip	2310011D08Rik|AI480459|Aip1|mKIAA1743	disabled 2 interacting protein	protein-coding
common_peak1-15218-48-23-1.38596465051366-4.50093765979984	chr4	136134538	136135892	+	0	NA	intron (NM_133872, intron 2 of 18)	intron (NM_133872, intron 2 of 18)	23423	NM_133872	99982	Mm.28540	NM_133872	ENSMUSG00000036940	Kdm1a	1810043O07Rik|AA408884|Aof2|D4Ertd478e|Kdm1|Lsd1|mKIAA0601	lysine (K)-specific demethylase 1A	protein-coding
common_peak1-11182-45-23-1.27539552462372-3.69573697033081	chr15	76780139	76781928	+	0	NA	3' UTR (NM_054099, exon 4 of 4)	3' UTR (NM_054099, exon 4 of 4)	2059	NM_054099	117171	Mm.322968	NM_054099		1110038F14Rik	-	RIKEN cDNA 1110038F14 gene	protein-coding
unique_peak1-107-12-1-2.64877598508764-3.36932189928148	chr1	55163672	55164316	+	0	NA	Intergenic	Intergenic	19002	NM_008303	15528	Mm.215667	NM_008303	ENSMUSG00000073676	Hspe1	10kDa|Hsp10|mt-cpn10	heat shock protein 1 (chaperonin 10)	protein-coding
common_peak1-16019-11-8-0.338768582809301-1.14218153353838	chr5	35728910	35729579	+	0	NA	Intergenic	Intergenic	-2522	NM_010445	15371	Mm.358606	NM_010445	ENSMUSG00000067438	Hmx1	Nkx5-3	H6 homeobox 1	protein-coding
common_peak1-18187-57-86--0.176910455769799-0.408992416275689	chr8	19979897	19980838	+	0	NA	TTS (NR_028428)	TTS (NR_028428)	-21587	NM_001177408	100040599	Mm.491087	NM_001177408	ENSMUSG00000074449	Gm15319	OTTMUSG00000020118	predicted gene 15319	protein-coding
common_peak2-26404-12-19--0.673152109799724-0.546772548767014	chr2	59155146	59155630	+	0	NA	intron (NM_175464, intron 9 of 20)	intron (NM_175464, intron 9 of 20)	69351	NR_040510	76676	Mm.110038	NR_040510	ENSMUSG00000087455	5330411J11Rik	-	RIKEN cDNA 5330411J11 gene	ncRNA
common_peak2-31530-7-13--1.00826409175941-0.697979855752659	chr8	110618423	110618962	+	0	NA	Intergenic	Intergenic	489885	NR_077224	109215	Mm.65282	NR_077224		3010033K07Rik	-	RIKEN cDNA 3010033K07 gene	ncRNA
common_peak2-24995-12-18--0.599151528355947-0.476916024233333	chr18	11051667	11052388	+	0	NA	promoter-TSS (NM_010258)	promoter-TSS (NM_010258)	-481	NM_010258	14465	Mm.329287	NM_010258	ENSMUSG00000005836	Gata6	AA410133|GATA-6	GATA binding protein 6	protein-coding
unique_peak2-34690-2-11--2.50241675698448-2.32232533660526	chr15	25578721	25579160	+	0	NA	intron (NM_019472, intron 1 of 40)	intron (NM_019472, intron 1 of 40)	26635	NM_019472	17909	Mm.60590	NM_019472	ENSMUSG00000022272	Myo10	AW048724|D15Ertd600e|mKIAA0799	myosin X	protein-coding
common_peak1-10355-8-6-0.197867495889966-1.03789460276074	chr13	84222278	84222761	+	0	NA	Intergenic	Intergenic	-139382	NR_029418	72745	Mm.295063	NM_175187	ENSMUSG00000035762	Tmem161b	2810446P07Rik|AI843389	transmembrane protein 161B	protein-coding
common_peak1-9886-8-6-0.197867495889966-1.03789460276074	chr12	85192133	85192639	+	0	NA	intron (NR_073563, intron 3 of 10)	intron (NR_073563, intron 3 of 10)	-9078	NM_010949	18222	Mm.4390	NM_010949	ENSMUSG00000021224	Numb	Nb	numb gene homolog (Drosophila)	protein-coding
unique_peak1-4713-9-2-1.60465090568306-1.87199725847353	chr3	103405261	103405743	+	0	NA	intron (NM_001276676, intron 3 of 6)	intron (NM_001276676, intron 3 of 6)	25453	NM_001276681	54524	Mm.88818	NM_018800	ENSMUSG00000027849	Syt6	3110037A08Rik|AW048930|sytVI	synaptotagmin VI	protein-coding
common_peak2-26201-19-25--0.297752391479405-0.376654945067947	chr2	25546063	25546965	+	0	NA	Intergenic	ETnERV2-int|LTR|ERVK	8268	NM_178036	332578	Mm.246797	NM_178036	ENSMUSG00000047356	Lcn10	9230112J07Rik	lipocalin 10	protein-coding
common_peak2-32184-8-16--1.08224042330277-0.891319708951328	chr9	115310626	115310948	+	0	NA	Intergenic	Intergenic	65508	NR_040730	73856	Mm.399156	NR_040730		4930428G15Rik	-	RIKEN cDNA 4930428G15 gene	ncRNA
common_peak2-24114-22-35--0.522640896354908-0.664636481544818	chr16	32914023	32914647	+	0	NA	exon (NM_001081255, exon 1 of 21)	exon (NM_001081255, exon 1 of 21)	149	NM_001081255	70144	Mm.491178	NM_001081255	ENSMUSG00000022801	Lrch3	2210409B11Rik|AW215594|Gm1742	leucine-rich repeats and calponin homology (CH) domain containing 3	protein-coding
common_peak2-23788-15-9-0.690236655668294-0.732381977911291	chr15	99585351	99585803	+	0	NA	intron (NM_028015, intron 1 of 9)	B1_Mur4|SINE|Alu	17369	NM_028015	71949	Mm.390821	NM_028015		Cers5	2310081H14Rik|AU045339|AW544927|Lass5|Trh4	ceramide synthase 5	protein-coding
common_peak2-21860-15-8-0.842239749113344-0.891319708951327	chr12	16842307	16842765	+	0	NA	Intergenic	Intergenic	24765	NM_033270	50496	Mm.23296	NM_033270	ENSMUSG00000057469	E2f6	AI462434|E2F6b|EMA	E2F transcription factor 6	protein-coding
common_peak1-10010-59-76-0.058577460177677-0.323303948644615	chr13	5860394	5861365	+	0	NA	5' UTR (NM_011803, exon 1 of 4)	5' UTR (NM_011803, exon 1 of 4)	144	NM_011803	23849	Mm.275036	NM_011803	ENSMUSG00000000078	Klf6	AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9	Kruppel-like factor 6	protein-coding
unique_peak1-2865-11-3-1.50869358425161-1.95434855131066	chr17	34683675	34684173	+	0	NA	Intergenic	Intergenic	-17316	NM_010929	18132	Mm.173813	NM_010929	ENSMUSG00000015468	Notch4	Int-3|Int3|N4	notch 4	protein-coding
unique_peak2-39099-4-6--0.830815435910851-0.989110657569874	chr8	78656794	78657356	+	0	NA	Intergenic	B3|SINE|B2	684482	NM_001164235	71831	Mm.443238	NM_027944	ENSMUSG00000031620	1700007B14Rik	-	RIKEN cDNA 1700007B14 gene	protein-coding
unique_peak2-33793-5-11--1.28934283672701-1.477227296591	chr11	120230936	120231624	+	0	NA	3' UTR (NM_027980, exon 10 of 10)	3' UTR (NM_027980, exon 10 of 10)	8432	NM_172802	238021	Mm.481403	NM_172802	ENSMUSG00000025380	Fscn2	A930022G03|C630046B20Rik|ahl8	fascin homolog 2, actin-bundling protein, retinal (Strongylocentrotus purpuratus)	protein-coding
unique_peak1-3186-25-10-1.40241828670781-2.39922209159552	chr18	46864638	46865668	+	0	NA	Intergenic	Intergenic	22843	NM_033037	12583	Mm.241056	NM_033037	ENSMUSG00000033022	Cdo1	1300002L19Rik|Cdo|D18Ucla3	cysteine dioxygenase 1, cytosolic	protein-coding
unique_peak1-514-8-3-1.00522241794757-1.39487600375387	chr1	183778760	183779274	+	0	NA	Intergenic	Intergenic	-6485	NM_133815	98386	Mm.4538	NM_133815	ENSMUSG00000004880	Lbr	AI505894|ic	lamin B receptor	protein-coding
unique_peak1-5907-9-3-1.18961340640422-1.57096726280955	chr6	88064859	88065402	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-10878	NR_105795	102465196		NR_105795	miRBase:MI0021905	Mir6376	mmu-mir-6376	microRNA mir-6376	ncRNA
common_peak1-11801-24-9-1.47128180788035-2.52428350728854	chr16	57419032	57419944	+	0	NA	intron (NM_001040397, intron 1 of 4)	intron (NM_001040397, intron 1 of 4)	66098	NM_001040397	78749	Mm.328360	NM_001040397	ENSMUSG00000043336	Filip1l	4631422O05Rik|Doc1	filamin A interacting protein 1-like	protein-coding
common_peak1-11747-30-32-0.12528129013342-0.352152970649944	chr16	35938272	35939482	+	0	NA	exon (NM_001013371, exon 1 of 5)	exon (NM_001013371, exon 1 of 5)	236	NM_001013371	209200	Mm.390852	NM_001013371	ENSMUSG00000049502	Dtx3l	AU042200|BC023741	deltex 3-like (Drosophila)	protein-coding
common_peak2-26292-25-26-0.106962403181638-0.336580821310522	chr2	31572697	31573355	+	0	NA	intron (NM_001283047, intron 2 of 11)	B2_Mm2|SINE|B2	28969	NM_001283046	11350	Mm.1318	NM_009594	ENSMUSG00000026842	Abl1	AI325092|Abl|E430008G22Rik|c-Abl	c-abl oncogene 1, non-receptor tyrosine kinase	protein-coding
common_peak2-27551-17-22--0.305265617851975-0.348739088570342	chr3	96268503	96269240	+	0	NA	Intergenic	B1_Mur2|SINE|Alu	-12642	NM_001256180	329716	Mm.275223	NM_183223	ENSMUSG00000046317	BC107364	D730018G16	cDNA sequence BC107364	protein-coding
common_peak2-28487-15-13-0.204809828498052-0.368541233333383	chr4	155650994	155651642	+	0	NA	Intergenic	Intergenic	-42352	NM_198305	231003	Mm.423038	NM_198305	ENSMUSG00000078484	Klhl17	AL022703|BC058738	kelch-like 17	protein-coding
common_peak2-31265-50-79--0.28098777840841-0.554459000578111	chr8	71366376	71367864	+	0	NA	Intergenic	RLTR20B2|LTR|ERVK	-37334	NM_008509	16956	Mm.1514	NM_008509	ENSMUSG00000015568	Lpl	-	lipoprotein lipase	protein-coding
unique_peak2-33668-2-5--1.50241675698448-1.08602067057793	chr11	100939844	100940174	+	0	NA	exon (NM_010475, exon 2 of 6)	exon (NM_010475, exon 2 of 6)	284	NM_010475	15485	Mm.188939	NM_010475	ENSMUSG00000019301	Hsd17b1	17HSDB1|17beta-HSD|E2DH|Hsd17ba	hydroxysteroid (17-beta) dehydrogenase 1	protein-coding
common_peak2-27760-8-9--0.316705676939792-1.03275496310833	chr3	129583145	129583664	+	0	NA	promoter-TSS (NM_183423)	promoter-TSS (NM_183423)	-698	NM_183423	66350	Mm.151951	NM_023196	ENSMUSG00000027999	Pla2g12a	2310004B05Rik|GXII|GXII-1|GXII-1-PLA2|Pla2g12|Rossy|mGXII-1	phospholipase A2, group XIIA	protein-coding
unique_peak1-4834-9-2-1.60465090568306-1.87199725847353	chr3	148907119	148907588	+	0	NA	Intergenic	Intergenic	-30348	NR_040591	381482	Mm.393866	NR_040591		Gm1653	-	predicted gene 1653	ncRNA
unique_peak2-38476-10-11--0.228547155712387-0.31137425193576	chr7	29784041	29784735	+	0	NA	intron (NM_008279, intron 23 of 31)	intron (NM_008279, intron 23 of 31)	16515	NM_008279	26411	Mm.148278	NM_008279	ENSMUSG00000037337	Map4k1	Hpk1|mHPK1	mitogen-activated protein kinase kinase kinase kinase 1	protein-coding
common_peak2-24864-38-58--0.311190390063311-0.50619083865892	chr17	79020149	79021023	+	0	NA	intron (NM_028813, intron 11 of 13)	intron (NM_028813, intron 11 of 13)	113183	NM_028813	74199	Mm.292983	NM_028813	ENSMUSG00000024076	Vit	1700052E02Rik|1700110E08Rik|2810429K11Rik	vitrin	protein-coding
common_peak2-21360-20-26--0.266812717572275-0.373496418836697	chr11	78174237	78175097	+	0	NA	exon (NM_001277290, exon 8 of 9)	exon (NM_001277290, exon 8 of 9)	17643	NM_011676	22248	Mm.284811	NM_011676	ENSMUSG00000002058	Unc119	D11Bhm52|HRG4|MRG4|Rg4|Rtg4|Unc119h	unc-119 homolog (C. elegans)	protein-coding
common_peak1-12969-18-12-0.612479433087259-0.739965416525508	chr19	3907032	3907736	+	0	NA	promoter-TSS (NM_001136091)	promoter-TSS (NM_001136091)	-251	NM_001136091	27060	Mm.271689	NM_016921	ENSMUSG00000001750	Tcirg1	ATP6N1C|ATP6a3|Atp6i|OC-116|OPTB1|Stv1|TIRC7|Vph1|oc	T cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3	protein-coding
common_peak2-20059-19-11-0.81772482594053-0.991115276827166	chr1	151501031	151501387	+	0	NA	Intergenic	Intergenic	307205	NM_008869	18783	Mm.4186	NM_008869	ENSMUSG00000056220	Pla2g4a	Pla2g4|cPLA2|cPLA2alpha	phospholipase A2, group IVA (cytosolic, calcium-dependent)	protein-coding
common_peak2-20098-16-6-1.31090872021046-1.49151883326344	chr1	157380430	157380897	+	0	NA	Intergenic	Intergenic	-24587	NM_001145781	72482	Mm.288249	NM_026683	ENSMUSG00000033701	Acbd6	0610010G04Rik|2610100E10Rik	acyl-Coenzyme A binding domain containing 6	protein-coding
common_peak1-12645-13-11-0.193509529916613-0.379391706698377	chr18	35553309	35553938	+	0	NA	intron (NM_030749, intron 3 of 9)	intron (NM_030749, intron 3 of 9)	104956	NM_030749	81500	Mm.291482	NM_030749	ENSMUSG00000024357	Sil1	1810057E01Rik|AI042831|wz	endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)	protein-coding
common_peak1-12948-340-169-1.95683074883716-67.7850411122719	chr19	38599228	38604891	+	0	NA	intron (NM_019588, intron 1 of 31)	intron (NM_019588, intron 1 of 31)	3372	NM_019588	74055	Mm.34031	NM_019588	ENSMUSG00000024998	Plce1	4933403A21Rik|PLCepsilon|Plce|mKIAA1516	phospholipase C, epsilon 1	protein-coding
unique_peak2-37414-2-7--1.91745425626332-1.45399745587252	chr4	147906869	147907182	+	0	NA	intron (NM_020009, intron 36 of 57)	intron (NM_020009, intron 36 of 57)	-25511	NM_016699	50912	Mm.266635	NM_016699	ENSMUSG00000017264	Exosc10	PM-Scl|PM/Scl-100|Pmscl2|RRP6|p2|p3|p4	exosome component 10	protein-coding
common_peak1-9459-27-29-0.0846553552867171-0.333081040816753	chr11	103381668	103382982	+	0	NA	Intergenic	Intergenic	93728	NM_001033434	380730	Mm.380214	NM_001033434	ENSMUSG00000034239	Gm884	LRRC37	predicted gene 884	protein-coding
common_peak1-13558-23-20-0.32945008173032-0.471456499375596	chr2	6071062	6072135	+	0	NA	Intergenic	Intergenic	17669	NR_033471	100038358	Mm.353975	NR_033470		Gm10857	AU015850|ENSMUSG00000075545	predicted gene 10857	ncRNA
unique_peak2-34561-7-7--0.200909169701811-0.97990265578305	chr14	65357803	65358374	+	0	NA	intron (NM_001081177, intron 13 of 39)	intron (NM_001081177, intron 13 of 39)	86720	NM_001081177	16554	Mm.23611	NM_001081177	ENSMUSG00000060012	Kif13b	5330429L19Rik|6030414C01|AI429803|C130021D12Rik|GAKIN	kinesin family member 13B	protein-coding
common_peak2-20863-7-9--0.522837264589173-1.05908390183068	chr11	95092501	95092937	+	0	NA	Intergenic	Intergenic	-30124	NM_053093	93670	Mm.40085	NM_053093	ENSMUSG00000020872	Tac4	AW489379|PPT-C	tachykinin 4	protein-coding
unique_peak1-1425-14-5-1.31425365963649-1.4372489031793	chr12	84384285	84385024	+	0	NA	intron (NM_001267625, intron 7 of 10)	intron (NM_001267625, intron 7 of 10)	-344512	NR_046045	74283	Mm.398247	NR_046045		1700085C21Rik	-	RIKEN cDNA 1700085C21 gene	ncRNA
common_peak2-28821-61-60-0.452011992186454-1.10782270834225	chr5	65696845	65698442	+	0	NA	intron (NM_011258, intron 4 of 24)	intron (NM_011258, intron 4 of 24)	29235	NM_011258	19687	Mm.148877	NM_011258	ENSMUSG00000029191	Rfc1	140kDa|Alp145|RFC140|Recc1	replication factor C (activator 1) 1	protein-coding
common_peak1-19120-21-83--1.82282815751253-7.77572678768527	chr9	76014552	76015597	+	0	NA	intron (NM_205844, intron 7 of 8)	RMER17C|LTR|ERVK	46390	NM_205844	404194	Mm.213862	NM_205844	ENSMUSG00000059383	Gfral	AY457637|Gral	GDNF family receptor alpha like	protein-coding
unique_peak2-39686-6-17--1.60452689106201-1.49151883326343	chr9	109081716	109082416	+	0	NA	intron (NM_177598, intron 9 of 9)	B1_Mus1|SINE|Alu	16423	NM_177598	211305	Mm.225242	NM_177598	ENSMUSG00000049314	Fbxw13	E330017E16	F-box and WD-40 domain protein 13	protein-coding
unique_peak2-38633-3-6--1.22133801201688-1.08602067057793	chr7	82421944	82422384	+	0	NA	intron (NM_153579, intron 1 of 12)	intron (NM_153579, intron 1 of 12)	31108	NM_001109753	64176	Mm.273082	NM_153579	ENSMUSG00000053025	Sv2b	A830038F04Rik|AI850768|mKIAA0735	synaptic vesicle glycoprotein 2 b	protein-coding
unique_peak2-37461-8-8--0.164702583494742-1.00793137938329	chr5	93044525	93045090	+	0	NA	intron (NM_177230, intron 22 of 24)	IAPEz-int|LTR|ERVK	12730	NM_175096	52331	Mm.21965	NM_175096	ENSMUSG00000047963	Stbd1	D530019K15Rik|D5Ertd593e	starch binding domain 1	protein-coding
common_peak1-12883-14-10-0.439784541720347-0.519648556297791	chr18	79008414	79009171	+	0	NA	intron (NM_053099, intron 4 of 5)	intron (NM_053099, intron 4 of 5)	-215103	NM_030683	27411	Mm.44158	NM_030683	ENSMUSG00000024552	Slc14a2	UT-A1|UT-A3	solute carrier family 14 (urea transporter), member 2	protein-coding
common_peak1-15063-32-57--0.578888975907912-1.03825765497309	chr3	123508415	123509372	+	0	NA	Intergenic	Intergenic	-115123	NR_121616	83398	Mm.443908	NM_031186	ENSMUSG00000027977	Ndst3	4921531K01Rik|4930511P15Rik|N-HSST 3|NDST-3	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	protein-coding
unique_peak1-7363-11-8-0.338768582809301-1.14218153353838	chrX	36824681	36825339	+	0	NA	Intergenic	L1_Rod|LINE|L1	125567	NM_001177380	78631	Mm.243738	NM_001177380	ENSMUSG00000079619	Cypt15	1700085A12Rik	cysteine-rich perinuclear theca 15	protein-coding
unique_peak2-32673-9-9--0.132314688483142-1.03275496310833	chr1	135821124	135821775	+	0	NA	Intergenic	L2b|LINE|L2	-3471	NM_054077	116847	Mm.214514	NM_054077	ENSMUSG00000041577	Prelp	7330409J17Rik|SLRR2A	proline arginine-rich end leucine-rich repeat	protein-coding
common_peak2-22688-15-20--0.380152672223105-0.397739447719386	chr13	98478162	98478833	+	0	NA	Intergenic	Intergenic	148542	NR_046157	328314	Mm.138047	NR_046157		Gm5086	B230311A21|EG328314	predicted gene 5086	ncRNA
common_peak1-10759-10-7-0.356415345008769-1.12966497611638	chr14	70173157	70173642	+	0	NA	intron (NM_020275, intron 3 of 7)	intron (NM_020275, intron 3 of 7)	6120	NM_020275	21933	Mm.193430	NM_020275	ENSMUSG00000022074	Tnfrsf10b	DR5|KILLER|Ly98|MK|TRAILR2|TRICK2A|TRICK2B|TRICKB	tumor necrosis factor receptor superfamily, member 10b	protein-coding
unique_peak2-38847-3-5--0.998945590680433-0.96108193396963	chr7	143798051	143798484	+	0	NA	Intergenic	Intergenic	104020	NR_046021	621677	Mm.207290	NR_046021		Gm6249	EG621677	predicted gene 6249	ncRNA
unique_peak1-2834-7-3-0.799090830298189-1.23214870625617	chr17	27965934	27966460	+	0	NA	Intergenic	Intergenic	-8710	NM_001271511	224647	Mm.196577	NM_001033279	ENSMUSG00000056692	D17Wsu92e	AU020189|C030010A15|C80239	DNA segment, Chr 17, Wayne State University 92, expressed	protein-coding
common_peak2-22648-10-13--0.450939577048835-0.386243247519795	chr13	93771357	93772063	+	0	NA	Intergenic	Intergenic	-71549	NR_036451	100502942	Mm.441946	NM_177623		Gm4814	C920025J10|EG218444	predicted gene 4814	ncRNA
common_peak2-23398-6-8--0.60452689106201-1.03789460276074	chr15	58932466	58933011	+	0	NA	Intergenic	Intergenic	-19157	NM_144800	211401	Mm.215481	NM_144800	ENSMUSG00000022353	Mtss1	2310003N14Rik|BC024131|D130001D01Rik|Mim|mKIAA0429	metastasis suppressor 1	protein-coding
unique_peak1-6517-12-2-2.06381348436648-2.79529063155376	chr7	118486477	118486991	+	0	NA	Intergenic	Intergenic	-220545	NR_015573	75479	Mm.381620	NR_015573		1700012D14Rik	-	RIKEN cDNA 1700012D14 gene	ncRNA
common_peak2-22899-21-20-0.177171842487475-0.380101753845079	chr14	33350832	33351620	+	0	NA	intron (NM_001081221, intron 5 of 20)	MTEa|LTR|MaLR	24519	NM_001081221	319955	Mm.318310	NM_177043	ENSMUSG00000054051	Ercc6	4732403I04|C130058G22Rik|CSB	excision repair cross-complementing rodent repair deficiency, complementation group 6	protein-coding
unique_peak1-465-8-3-1.00522241794757-1.39487600375387	chr1	171248490	171248820	+	0	NA	Intergenic	B4A|SINE|B4	212940	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
common_peak1-18165-7-9--0.522837264589173-1.05908390183068	chr8	13643861	13644330	+	0	NA	intron (NM_009025, intron 1 of 23)	intron (NM_009025, intron 1 of 23)	33492	NM_009025	19414	Mm.18517	NM_009025	ENSMUSG00000031453	Rasa3	AI326412|C86362|E130011G04|GAPIII|scat	RAS p21 protein activator 3	protein-coding
unique_peak1-2302-33-3-3.33133756252553-8.51993963657044	chr15	81081450	81082554	+	0	NA	intron (NR_077230, intron 1 of 1)	B4A|SINE|B4	290	NR_077230	78102	Mm.296832	NR_077229		8430426J06Rik	-	RIKEN cDNA 8430426J06 gene	ncRNA
common_peak2-26035-36-53--0.275566415995714-0.442998361601932	chr19	61266542	61267235	+	0	NA	Intergenic	B4A|SINE|B4	-14676	NM_001177513	633057	Mm.426097	NM_001177513	ENSMUSG00000094649	Gm7102	EG633057	predicted gene 7102	protein-coding
common_peak1-14877-55-93--0.349968980524936-0.771450065510656	chr3	95817985	95819409	+	0	NA	intron (NM_013841, intron 14 of 14)	intron (NM_013841, intron 14 of 14)	-18935	NM_023320	67220	Mm.458147	NM_023320	ENSMUSG00000015745	Plekho1	2810052M02Rik|CKIP-1|Ckip1|JZA-20|Jza2	pleckstrin homology domain containing, family O member 1	protein-coding
common_peak1-10808-18-9-0.990991056340989-1.23014042908325	chr14	79397418	79398289	+	0	NA	intron (NM_027906, intron 16 of 44)	L1Md_T|LINE|L1	148868	NM_173758	219189	Mm.159651	NM_027906	ENSMUSG00000058997	Vwa8	1300010F03Rik|4932416F07Rik|AI957255|Kiaa0564|mKIAA0564	von Willebrand factor A domain containing 8	protein-coding
common_peak2-21586-72-95-0.0836213121511618-0.355052609790503	chr11	98201960	98203548	+	0	NA	Intergenic	Intergenic	-7298	NM_144828	19049	Mm.45372	NM_144828	ENSMUSG00000061718	Ppp1r1b	AU040756|DARPP-32|Darpp32	protein phosphatase 1, regulatory (inhibitor) subunit 1B	protein-coding
common_peak1-11478-12-9-0.326847890200276-0.459837087125828	chr15	102038375	102039109	+	0	NA	exon (NM_001289695, exon 4 of 7)	exon (NM_001289695, exon 4 of 7)	3740	NM_001289695	68744	Mm.352945	NM_153194	ENSMUSG00000046897	Zfp740	1110034O07Rik|AW548228|Znf740	zinc finger protein 740	protein-coding
unique_peak2-34977-9-27--1.61774151565338-2.34622402919155	chr15	98917347	98918148	+	0	NA	exon (NM_001024702, exon 1 of 2)	exon (NM_001024702, exon 1 of 2)	412	NM_001024702	239659	Mm.309917	NM_001024702	ENSMUSG00000001076	C1ql4	C1qtnf11|CTRP11	complement component 1, q subcomponent-like 4	protein-coding
unique_peak2-34768-4-7--1.02346051385325-1.09384600808989	chr15	59311293	59311802	+	0	NA	intron (NM_026746, intron 4 of 6)	intron (NM_026746, intron 4 of 6)	105794	NM_001164604	68501	Mm.27762	NM_026746	ENSMUSG00000059586	Nsmce2	1110014D18Rik|AI661537	non-SMC element 2 homolog (MMS21, S. cerevisiae)	protein-coding
common_peak2-22951-35-52--0.296550196100695-0.486454540233415	chr14	50869980	50871229	+	0	NA	Intergenic	L1Md_A|LINE|L1	-12046	NM_146363	258360	Mm.377457	NM_146363	ENSMUSG00000048080	Olfr731	MOR246-5	olfactory receptor 731	protein-coding
common_peak1-16736-13-10-0.319040412000471-0.446472590016315	chr6	31089263	31089889	+	0	NA	intron (NR_110471, intron 3 of 3)	intron (NR_110471, intron 3 of 3)	-76483	NR_029532	387223		NR_029532	miRBase:MI0000143	Mir29b-1	Mirn29b|Mirn29b-1	microRNA 29b-1	ncRNA
common_peak2-30381-11-7-0.508693584251613-1.21681515183528	chr7	29471347	29471749	+	0	NA	Intergenic	MERVL_2A-int|LTR|ERVL	-6320	NM_207238	233040	Mm.116116	NM_207238	ENSMUSG00000037463	Fbxo27	E130008B10Rik|FBG5|Gm161	F-box protein 27	protein-coding
common_peak1-8666-13-26--0.9764154715257-1.09492971584134	chr10	128411729	128412358	+	0	NA	Intergenic	Lx9|LINE|L1	-13999	NM_027853	71664	Mm.337232	NM_027853	ENSMUSG00000025347	Mettl7b	0610006F02Rik|AI266817	methyltransferase like 7B	protein-coding
unique_peak1-4464-11-2-1.92373108353046-2.32232533660526	chr2	180230115	180230626	+	0	NA	Intergenic	MIRm|SINE|MIR	-4311	NM_018766	18216	Mm.301712	NM_018766	ENSMUSG00000027568	Ntsr1	NT-1R|NTR-1|NTR1	neurotensin receptor 1	protein-coding
common_peak1-19198-16-21--0.341167976369236-0.392630012299441	chr9	101034559	101035279	+	0	NA	intron (NM_172144, intron 9 of 12)	L1Md_F2|LINE|L1	56433	NM_001100451	77853	Mm.326206	NM_001100451		Msl2	E130103E02Rik|Msl2l1|Rnf184	male-specific lethal 2 homolog (Drosophila)	protein-coding
common_peak2-22317-8-10--0.454209200689727-1.078512453669	chr13	21778741	21779285	+	0	NA	Intergenic	L1_Mm|LINE|L1	-12164	NM_146543	258536	Mm.223076	NM_146543	ENSMUSG00000094398	Olfr1360	MOR256-10|MOR256-35	olfactory receptor 1360	protein-coding
common_peak2-31611-11-6-0.701338662194009-1.32595962126035	chr8	122583319	122583763	+	0	NA	Intergenic	MTC-int|LTR|MaLR	41831	NM_133967	102193	Mm.240076	NM_133967	ENSMUSG00000031823	Zdhhc7	AL024087|Gramp2	zinc finger, DHHC domain containing 7	protein-coding
common_peak2-25574-10-5-0.771452844287613-1.33892459842472	chr19	6980029	6980449	+	0	NA	Intergenic	Intergenic	3896	NM_012021	54683	Mm.279782	NM_012021		Prdx5	AOEB166|AOPP|Pmp20|Prdx6|PrxV	peroxiredoxin 5	protein-coding
unique_peak1-4358-7-2-1.21412832957703-1.45399745587252	chr2	156223394	156223897	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	-4930	NR_024329	347740	Mm.324242	NR_024329		2900097C17Rik	1810005K14Rik|4930563C06Rik	RIKEN cDNA 2900097C17 gene	ncRNA
unique_peak2-33604-11-21--0.950738034385684-0.991115276827166	chr11	94211437	94212224	+	0	NA	intron (NM_029600, intron 29 of 30)	intron (NM_029600, intron 29 of 30)	22515	NM_146024	71452	Mm.141054	NM_027799	ENSMUSG00000020864	Ankrd40	1110011C06Rik|5530600A18Rik|Gcap15	ankyrin repeat domain 40	protein-coding
common_peak2-27572-6-6--0.241956811677302-0.947717972411649	chr3	98339356	98339761	+	0	NA	Intergenic	L1_Mm|LINE|L1	-25068	NM_008294	15495	Mm.14309	NM_008294	ENSMUSG00000095143	Hsd3b4	-	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 4	protein-coding
common_peak1-11006-14-9-0.577288065470282-0.630231561310125	chr15	36918020	36918734	+	0	NA	Intergenic	Intergenic	18780	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
unique_peak2-32795-2-9--2.23938235115068-1.87199725847353	chr1	181860946	181861351	+	0	NA	Intergenic	Intergenic	-30072	NM_001033285	226751	Mm.259655	NM_001033285	ENSMUSG00000026490	Cdc42bpa	A930014J19Rik|DMPK-like	CDC42 binding protein kinase alpha	protein-coding
common_peak1-15108-7-7--0.200909169701811-0.97990265578305	chr3	134239741	134240244	+	0	NA	Intergenic	Intergenic	-153393	NR_040600	75208	Mm.84580	NR_040600		4930539C22Rik	-	RIKEN cDNA 4930539C22 gene	ncRNA
unique_peak1-6223-9-3-1.18961340640422-1.57096726280955	chr7	3629573	3630093	+	0	NA	promoter-TSS (NM_181820)	promoter-TSS (NM_181820)	-678	NM_181820	353499	Mm.360398	NM_181820	ENSMUSG00000019734	Tmc4	-	transmembrane channel-like gene family 4	protein-coding
common_peak2-21250-35-87--1.02806136017479-3.59961219983479	chr11	69088114	69089287	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-38176	NM_008192	14919	Mm.291816	NM_008192	ENSMUSG00000020890	Gucy2e	GC-E|GC1|ROS-GC1	guanylate cyclase 2e	protein-coding
unique_peak2-35900-8-10--0.454209200689727-1.078512453669	chr19	4099817	4100413	+	0	NA	promoter-TSS (NM_008851)	promoter-TSS (NM_008851)	117	NR_075078	18739	Mm.1860	NM_008851	ENSMUSG00000024851	Pitpnm1	DRES9|Mpt-1|Nir-2|PITPnm 1|Pitpnm|R75447|Rd9|RdgB|RdgB1	phosphatidylinositol transfer protein, membrane-associated 1	protein-coding
unique_peak1-2488-13-7-0.778472030637769-0.817533494790411	chr16	8861339	8861967	+	0	NA	Intergenic	Intergenic	31460	NM_001081400	69053	Mm.390868	NM_001081400	ENSMUSG00000022507	1810013L24Rik	1110017P05Rik|3010002C02Rik|AA792997|AW124177|Gm19906|R74903	RIKEN cDNA 1810013L24 gene	protein-coding
common_peak2-27376-26-19-0.6059709972711-0.841847921495509	chr3	86461029	86461864	+	0	NA	intron (NM_030695, intron 46 of 56)	intron (NM_030695, intron 46 of 56)	-109241	NM_011839	23937	Mm.389466	NM_011839	ENSMUSG00000057777	Mab21l2	-	mab-21-like 2 (C. elegans)	protein-coding
common_peak2-31137-37-39-0.204064976598456-0.426350872773373	chr8	34953894	34955092	+	0	NA	intron (NM_001042674, intron 4 of 7)	intron (NM_001042674, intron 4 of 7)	85842	NM_019733	19663	Mm.323997	NM_019733	ENSMUSG00000031586	Rbpms	2010300K22Rik|2700019M19Rik|AU017537|RBP-MS|hermes	RNA binding protein gene with multiple splicing	protein-coding
unique_peak2-32515-8-16--1.08224042330277-0.891319708951328	chr1	56973372	56973966	+	0	NA	intron (NM_139146, intron 3 of 10)	intron (NM_139146, intron 3 of 10)	54509	NM_139146	212712	Mm.145599	NM_139146	ENSMUSG00000038331	Satb2	mKIAA1034	special AT-rich sequence binding protein 2	protein-coding
common_peak1-15559-36-61--0.474875224219121-0.827470873527606	chr4	124850401	124851410	+	0	NA	Intergenic	Intergenic	-45780	NM_153159	230738	Mm.402	NM_153159	ENSMUSG00000042677	Zc3h12a	BC036563|MCPIP|Mcpip1	zinc finger CCCH type containing 12A	protein-coding
common_peak1-19403-8-17--1.16470258349474-1.02063122982878	chrX	71364916	71365253	+	0	NA	Intergenic	Intergenic	-7721	NM_008106	14539	Mm.284825	NM_008106	ENSMUSG00000031394	Opn1mw	Gcp	opsin 1 (cone pigments), medium-wave-sensitive (color blindness, deutan)	protein-coding
common_peak2-28196-4-5--0.608423014574403-0.909929411522249	chr4	116678154	116678568	+	0	NA	TTS (NM_175244)	TTS (NM_175244)	10408	NM_175244	76608	Mm.251420	NM_175244	ENSMUSG00000046861	Hectd3	1700064K09Rik|AI467540|AW743312	HECT domain containing 3	protein-coding
common_peak2-26937-17-12-0.517856620063946-0.647240723060192	chr2	164433196	164433829	+	0	NA	intron (NM_001276432, intron 3 of 6)	intron (NM_001276432, intron 3 of 6)	5374	NM_001276432	277343	Mm.383292	NM_001080550	ENSMUSG00000070533	Wfdc8	Gm706	WAP four-disulfide core domain 8	protein-coding
unique_peak1-1892-8-5-0.420259917226415-1.10484139239135	chr14	64914890	64915379	+	0	NA	intron (NM_001253714, intron 1 of 4)	MTD|LTR|MaLR	120659	NM_001253716	110265	Mm.26713	NM_026322	ENSMUSG00000054733	Msra	2310045J23Rik|6530413P12Rik|MSR-A	methionine sulfoxide reductase A	protein-coding
common_peak1-8111-22-11-1.06232160436625-1.51503956548638	chr1	183368652	183369679	+	0	NA	intron (NM_028408, intron 3 of 5)	(T)n|Simple_repeat|Simple_repeat	72417	NM_207280	403180	Mm.220754	NM_207280	ENSMUSG00000050625	Ccdc121	6530421E24Rik|Gm755	coiled-coil domain containing 121	protein-coding
unique_peak1-5258-10-4-1.03448725012141-1.5150158574804	chr5	64195811	64196458	+	0	NA	exon (NM_177006, exon 7 of 7)	exon (NM_177006, exon 7 of 7)	-7600	NM_029554	76261	Mm.38143	NM_029554	ENSMUSG00000060512	0610040J01Rik	AI662686	RIKEN cDNA 0610040J01 gene	protein-coding
common_peak2-30352-10-19--0.965512749878593-0.917676348953458	chr7	27490460	27491319	+	0	NA	Intergenic	Lx4A|LINE|L1	-19440	NM_001081148	243881	Mm.294678	NM_001081148	ENSMUSG00000040650	Cyp2b23	EG243881	cytochrome P450, family 2, subfamily b, polypeptide 23	protein-coding
common_peak2-25631-13-8-0.608547029195456-0.660903317613904	chr19	9081200	9081791	+	0	NA	exon (NM_009643, exon 5 of 5)	exon (NM_009643, exon 5 of 5)	17721	NM_001286518	66395	Mm.203866	NM_009643	ENSMUSG00000069833	Ahnak	DY6	AHNAK nucleoprotein (desmoyokin)	protein-coding
common_peak2-20192-29-23-0.527327579893955-0.844067898188802	chr1	173767247	173768640	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-1885	NM_001252472	12523	Mm.259115	NM_013489	ENSMUSG00000038147	Cd84	A130013D22Rik|CDw84|SLAMF5	CD84 antigen	protein-coding
unique_peak1-1274-14-2-2.31425365963649-3.28500101358144	chr11	117913185	117913778	+	0	NA	intron (NM_001167746, intron 60 of 80)	RMER13B|LTR|ERVK	49897	NR_105898	102466768		NR_105898		Mir6933	mmu-mir-6933	microRNA mir-6933	ncRNA
common_peak2-21072-87-120-0.0767738685065744-0.357077716071707	chr11	49202358	49204480	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-40510	NM_147066	259069	Mm.377820	NM_147066	ENSMUSG00000046575	Olfr1389	MOR256-1	olfactory receptor 1389	protein-coding
common_peak1-14131-19-20-0.0103699038829257-0.306326795069978	chr2	130870985	130871855	+	0	NA	Intergenic	Intergenic	-2596	NM_001136063	14588	Mm.198399	NM_020014	ENSMUSG00000027316	Gfra4	AW060733|G630015H18Rik	glial cell line derived neurotrophic factor family receptor alpha 4	protein-coding
common_peak2-25660-31-16-1.13777582956278-2.15838218998676	chr19	10297126	10298054	+	0	NA	intron (NM_001033481, intron 7 of 25)	intron (NM_001033481, intron 7 of 25)	17067	NM_001163431	69038	Mm.375100	NM_026919	ENSMUSG00000036372	Tmem258	1810006K21Rik	transmembrane protein 258	protein-coding
unique_peak2-32848-7-19--1.52283726458917-1.55050753388976	chr1	193449666	193450382	+	0	NA	Intergenic	L3|LINE|CR1	50411	NM_178632	77065	Mm.338175	NM_178632	ENSMUSG00000037461	Ints7	5930412E23Rik	integrator complex subunit 7	protein-coding
common_peak1-12405-29-50--0.560135261356384-0.878852710448088	chr17	71615912	71616951	+	0	NA	intron (NM_145158, intron 4 of 7)	intron (NM_145158, intron 4 of 7)	43874	NM_145158	246707	Mm.23462	NM_145158	ENSMUSG00000024053	Emilin2	FOAP-10	elastin microfibril interfacer 2	protein-coding
unique_peak1-5315-21-3-2.56948926526624-4.33845181153635	chr5	77367403	77368246	+	0	NA	intron (NM_172146, intron 1 of 10)	RLTR4_MM-int|LTR|ERV1	-12612	NM_025939	67054	Mm.182931	NM_025939	ENSMUSG00000029247	Paics	2610511I09Rik|ADE2H1|AIRC|PAIS	phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase	protein-coding
common_peak2-29866-31-24-0.581382481038399-0.907273387067398	chr6	108184920	108185641	+	0	NA	intron (NM_010585, intron 2 of 61)	(TCCC)n|Simple_repeat|Simple_repeat	22190	NM_010585	16438	Mm.227912	NM_010585	ENSMUSG00000030102	Itpr1	D6Pas2|ENSMUSG00000072853|Gm10429|IP3R1|InsP3R|Ip3r|Itpr-1|P400|Pcp-1|Pcp1|opt	inositol 1,4,5-trisphosphate receptor 1	protein-coding
common_peak1-9861-16-27--0.689091279789542-0.798885335210229	chr12	80291351	80292071	+	0	NA	intron (NM_021557, intron 1 of 6)	intron (NM_021557, intron 1 of 6)	1095	NM_021557	17252	Mm.291799	NM_021557	ENSMUSG00000066441	Rdh11	2610319N22Rik|AI428145|AU045252|Arsdr1|C85936|CGI-82|HCBP12|M42C60|Mdt1|Psdr1|SCALD|UBE-1c1|Ube-1c	retinol dehydrogenase 11	protein-coding
unique_peak2-36388-7-9--0.522837264589173-1.05908390183068	chr2	120404732	120405100	+	0	NA	intron (NM_001177792, intron 1 of 8)	intron (NM_001177792, intron 1 of 8)	11509	NM_009222	20619	Mm.245715	NM_009222	ENSMUSG00000027287	Snap23	23kDa|AA408749|SNAP-23|Sndt|Syndet	synaptosomal-associated protein 23	protein-coding
common_peak2-26203-8-14--0.901668177660948-0.660903317613906	chr2	25621502	25622186	+	0	NA	intron (NM_010694, intron 2 of 6)	intron (NM_010694, intron 2 of 6)	755	NM_010694	16820	Mm.4632	NM_010694	ENSMUSG00000026936	Lcn3	Vnsp1	lipocalin 3	protein-coding
unique_peak1-5815-20-2-2.90311228387004-4.53603905993749	chr6	69610997	69612006	+	0	NA	Intergenic	Intergenic	-334333	NR_004434	19783		NR_004434		Rprl1	Rmrp2|Rpr|Rprh2	ribonuclease P RNA-like 1	ncRNA
common_peak1-17093-11-8-0.338768582809301-1.14218153353838	chr6	113022405	113023057	+	0	NA	intron (NR_027010, intron 1 of 2)	intron (NR_027010, intron 1 of 2)	4507	NR_027010	14910	Mm.280950	NR_027008	ENSMUSG00000086429	Gt(ROSA)26Sor	AV258896|Gtrgeo26|Gtrosa26|R26|ROSA26	gene trap ROSA 26, Philippe Soriano	ncRNA
common_peak1-12186-20-13-0.680719862533589-0.809260849721102	chr17	31896959	31897944	+	0	NA	Intergenic	Intergenic	82575	NM_001278570	12954	Mm.1228	NM_013501	ENSMUSG00000024041	Cryaa	Acry-1|Crya-1|Crya1|DAcry-1|lop18	crystallin, alpha A	protein-coding
common_peak2-24987-43-78--0.5212175626534-1.16907810239195	chr18	10028696	10030133	+	0	NA	intron (NM_001038589, intron 1 of 14)	intron (NM_001038589, intron 1 of 14)	733	NM_021522	59025	Mm.329277	NM_021522	ENSMUSG00000047879	Usp14	2610005K12Rik|2610037B11Rik|AW107924|C78769|ax|nmf375	ubiquitin specific peptidase 14	protein-coding
unique_peak1-6378-15-3-2.01216475055566-3.03427613622886	chr7	71093436	71094233	+	0	NA	Intergenic	B1_Mur3|SINE|Alu	-10033	NM_021366	50794	Mm.240473	NM_021366	ENSMUSG00000052040	Klf13	0610043C13Rik|9430029L20Rik|Bteb3|FKLF-2|FKLF2|NSLP1|RFLAT-1|RFLAT1	Kruppel-like factor 13	protein-coding
common_peak2-23969-13-7-0.778472030637769-0.817533494790411	chr16	17233069	17233479	+	0	NA	promoter-TSS (NM_178922)	promoter-TSS (NM_178922)	-406	NM_178922	58180	Mm.261602	NM_178922	ENSMUSG00000050240	Hic2	AA409108|HRG22|mKIAA1020	hypermethylated in cancer 2	protein-coding
unique_peak2-35857-4-8--1.19338551529556-1.21878474469819	chr18	75665976	75666472	+	0	NA	intron (NM_201354, intron 9 of 11)	intron (NM_201354, intron 9 of 11)	-8075	NR_045879	100038353	Mm.440724	NR_045879	ENSMUSG00000097712	Gm10532	ENSMUSG00000073534	predicted gene 10532	ncRNA
common_peak2-30277-14-18--0.348711353085941-0.360333814299795	chr7	16402085	16402809	+	0	NA	Intergenic	IAPEY3-int|LTR|ERVK	22581	NM_145710	252830	Mm.25863	NM_145710	ENSMUSG00000041583	Obox6	D17Ertd599e	oocyte specific homeobox 6	protein-coding
common_peak1-13649-47-49-0.290985234991823-0.585862008351098	chr2	26388568	26389963	+	0	NA	Intergenic	Intergenic	-29923	NM_008714	18128	Mm.290610	NM_008714	ENSMUSG00000026923	Notch1	9930111A19Rik|Mis6|N1|Tan1|lin-12	notch 1	protein-coding
common_peak1-12945-115-75-1.23117944689281-9.67648220652989	chr19	38025470	38028617	+	0	NA	intron (NM_001099634, intron 23 of 52)	MT2A|LTR|ERVL	91024	NM_001099634	226101	Mm.34674	NM_177035	ENSMUSG00000048612	Myof	2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3	myoferlin	protein-coding
unique_peak1-5644-6-1-1.5653981103803-1.56314192529759	chr6	24894187	24894656	+	0	NA	Intergenic	L1Md_T|LINE|L1	11704	NM_177013	319832	Mm.127446	NM_177013	ENSMUSG00000048022	Tmem229a	6332401O19Rik	transmembrane protein 229A	protein-coding
common_peak1-18217-33-52--0.39658289203767-0.641883003087205	chr8	25097533	25098931	+	0	NA	intron (NM_177086, intron 5 of 6)	ID_B1|SINE|B4	318099	NM_177086	320158	Mm.121274	NM_177086	ENSMUSG00000037492	Zmat4	9630048M01Rik	zinc finger, matrin type 4	protein-coding
unique_peak1-5970-23-1-3.72176750450908-6.57132529354008	chr6	94729873	94730610	+	0	NA	Intergenic	Intergenic	-80102	NM_008377	16206	Mm.245210	NM_008377	ENSMUSG00000030029	Lrig1	D6Bwg0781e|Img|LIG-1	leucine-rich repeats and immunoglobulin-like domains 1	protein-coding
common_peak1-17081-7-18--1.4488366831454-1.38887104242188	chr6	108660921	108661373	+	0	NA	Intergenic	Intergenic	-50219	NR_104577	75394	Mm.395061	NR_040757	ENSMUSG00000087341	0610040F04Rik	-	RIKEN cDNA 0610040F04 gene	ncRNA
unique_peak2-36591-3-6--1.22133801201688-1.08602067057793	chr2	175869284	175869719	+	0	NA	intron (NM_001177480, intron 1 of 4).2	intron (NM_001177480, intron 1 of 4).2	1124	NM_001164689	626832	Mm.441314	NM_001164689		Gm6710	1600017I02Rik|2310011F05Rik|2900089K14Rik|3100002L24Rik|WF-4	predicted gene 6710	protein-coding
unique_peak2-37830-3-10--1.87341470859657-1.75805390616669	chr5	130182450	130182964	+	0	NA	Intergenic	RMER6B|LTR|ERVK	-6744	NM_172462	22648	Mm.135067	NM_172462	ENSMUSG00000051034	Zfp11	6720465D24|Krox-6|Zfp-11	zinc finger protein 11	protein-coding
unique_peak2-37358-6-20--1.82691931239846-2.0280102512677	chr4	134534541	134535381	+	0	NA	Intergenic	Intergenic	48066	NM_026780	68592	Mm.29989	NM_026780	ENSMUSG00000028821	Syf2	1110018L13Rik|Cbpin|D4Bwg1551e|Gcipip|Ntc31|mp29|p29	SYF2 homolog, RNA splicing factor (S. cerevisiae)	protein-coding
common_peak2-28428-37-73--0.683460294143131-1.64294012011226	chr4	148151344	148152253	+	0	NA	Intergenic	Intergenic	-26703	NM_001159344	69743	Mm.233879	NM_027195	ENSMUSG00000028977	Casz1	2410019P08Rik|AV096627|BC040081|Cst|D4Ertd432e	castor zinc finger 1	protein-coding
unique_peak1-6376-10-1-2.35641534500877-2.57096726280955	chr7	70416325	70416975	+	0	NA	Intergenic	Intergenic	-59238	NM_007390	11441	Mm.113464	NM_007390	ENSMUSG00000030525	Chrna7	Acra7|alpha7	cholinergic receptor, nicotinic, alpha polypeptide 7	protein-coding
common_peak1-18543-14-14--0.00767443525087419-0.308519316180257	chr8	94917669	94918370	+	0	NA	Intergenic	(TCTA)n|Simple_repeat|Simple_repeat	36324	NM_018826	54352	Mm.101153	NM_018826	ENSMUSG00000031737	Irx5	-	Iroquois related homeobox 5 (Drosophila)	protein-coding
unique_peak1-1077-10-1-2.35641534500877-2.57096726280955	chr11	86620926	86621421	+	0	NA	promoter-TSS (NM_026191)	promoter-TSS (NM_026191)	-11	NM_026191	67487	Mm.260627	NM_026191	ENSMUSG00000018425	Dhx40	2410016C14Rik|ARG147|DDX40|PAD	DEAH (Asp-Glu-Ala-His) box polypeptide 40	protein-coding
common_peak2-23842-80-141--0.29917135313533-0.875424290883621	chr15	102002095	102005592	+	0	NA	Intergenic	Intergenic	15631	NM_144942	246277	Mm.296382	NM_144942	ENSMUSG00000023044	Csad	Csd	cysteine sulfinic acid decarboxylase	protein-coding
common_peak1-18502-61-29-1.47585873414082-6.19699457725345	chr8	86500716	86502635	+	0	NA	intron (NM_001277898, intron 1 of 9)	intron (NM_001277898, intron 1 of 9)	893	NM_001277898	18747	Mm.19111	NM_008854	ENSMUSG00000005469	Prkaca	PKCD|Pkaca	protein kinase, cAMP dependent, catalytic, alpha	protein-coding
unique_peak2-39165-4-5--0.608423014574403-0.909929411522249	chr8	94182831	94183248	+	0	NA	intron (NM_011936, intron 8 of 8)	intron (NM_011936, intron 8 of 8)	142514	NM_001253822	16373	Mm.238044	NM_008393	ENSMUSG00000031734	Irx3	AI894186	Iroquois related homeobox 3	protein-coding
unique_peak2-33881-3-6--1.22133801201688-1.08602067057793	chr12	30911031	30911319	+	0	NA	intron (NM_172951, intron 14 of 16)	intron (NM_172951, intron 14 of 16)	-93701	NM_009417	22018	Mm.4991	NM_009417	ENSMUSG00000020673	Tpo	-	thyroid peroxidase	protein-coding
common_peak1-13072-26-20-0.535581669379702-0.738267116931592	chr19	6305834	6306677	+	0	NA	promoter-TSS (NM_001033342)	promoter-TSS (NM_001033342)	-202	NM_001033342	240505	Mm.329622	NM_001033342	ENSMUSG00000024769	Cdc42bpg	BC046418|MRCKgamma	CDC42 binding protein kinase gamma (DMPK-like)	protein-coding
unique_peak2-32940-4-6--0.830815435910851-0.989110657569874	chr10	39659743	39660163	+	0	NA	Intergenic	Intergenic	-13224	NM_001163503	72045	Mm.235981	NM_001163503	ENSMUSG00000039339	2010001E11Rik	Naglt1b	RIKEN cDNA 2010001E11 gene	protein-coding
common_peak2-32261-9-11--0.395349094316936-0.344532117358383	chrX	8238496	8239106	+	0	NA	Intergenic	L1Md_T|LINE|L1	29169	NM_001081565	631002	Mm.379565	NM_001081565	ENSMUSG00000079703	Ssxb8	-	synovial sarcoma, X member B, breakpoint 8	protein-coding
common_peak1-17330-19-25--0.297752391479405-0.376654945067947	chr6	146793018	146793895	+	0	NA	Intergenic	(TC)n|Simple_repeat|Simple_repeat	-5176	NM_027059	69371	Mm.252733	NM_027059	ENSMUSG00000030292	Smco2	1700023A16Rik	single-pass membrane protein with coiled-coil domains 2	protein-coding
unique_peak2-36250-3-10--1.87341470859657-1.75805390616669	chr2	49811368	49811827	+	0	NA	Intergenic	ORR1B1|LTR|MaLR	-110352	NR_033304	320343	Mm.130607	NM_177139	ENSMUSG00000050447	Lypd6	E130115E03Rik	LY6/PLAUR domain containing 6	protein-coding
common_peak1-10623-21-16-0.482026424015896-0.650819692678078	chr14	34548918	34549721	+	0	NA	Intergenic	Charlie22a|DNA|MER1_type	146863	NM_008978	19256	Mm.8019	NM_008978	ENSMUSG00000021940	Ptpn20	typ	protein tyrosine phosphatase, non-receptor type 20	protein-coding
common_peak1-11778-11-3-1.50869358425161-1.95434855131066	chr16	45839758	45840266	+	0	NA	intron (NM_153412, intron 1 of 17)	intron (NM_153412, intron 1 of 17)	4479	NM_153412	208177	Mm.211477	NM_153412	ENSMUSG00000033149	Phldb2	AV253284|C820004H04Rik|LL5b|LL5beta	pleckstrin homology-like domain, family B, member 2	protein-coding
unique_peak1-711-10-4-1.03448725012141-1.5150158574804	chr10	86310285	86310780	+	0	NA	intron (NM_138673, intron 65 of 68)	intron (NM_138673, intron 65 of 68)	68782	NM_175331	103466	Mm.200446	NM_175331	ENSMUSG00000054027	Nt5dc3	AU040402|AW540062|C630002B14Rik|TU12B1-TY	5'-nucleotidase domain containing 3	protein-coding
unique_peak1-846-20-4-2.16614668970383-3.28004177908661	chr11	17468995	17470022	+	0	NA	Intergenic	RLTR20B3|LTR|ERVK	311887	NM_020558	57316	Mm.287982	NM_020558	ENSMUSG00000000581	C1d	1110036E10Rik|AI875855|SUN-CoR	C1D nuclear receptor co-repressor	protein-coding
common_peak1-9797-20-40--0.869477220026891-1.45230360914611	chr12	69158342	69159110	+	0	NA	Intergenic	MURVY-LTR|LTR|ERV1	-388468	NR_033146	100316870	Mm.379794	NR_033146		Gm17821	-	DDB1 and CUL4 associated factor 5 pseudogene	pseudo
unique_peak1-4740-12-2-2.06381348436648-2.79529063155376	chr3	108147394	108147993	+	0	NA	intron (NM_019972, intron 11 of 19)	intron (NM_019972, intron 11 of 19)	-20136	NM_026831	68753	Mm.75201	NM_026831	ENSMUSG00000068745	Mybphl	1110037P11Rik	myosin binding protein H-like	protein-coding
unique_peak1-5620-112-53-1.67836279815681-14.8738986985345	chr6	3200429	3201705	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-37452	NR_036696	667335	Mm.380219	NR_036696		Gm8579	EG667335	spermatogenesis associated glutamate (E)-rich protein 4a pseudogene	pseudo
common_peak2-22948-26-50--0.744526249813033-1.39836854781781	chr14	49065572	49066525	+	0	NA	promoter-TSS (NM_172600)	promoter-TSS (NM_172600)	21	NM_172600	218989	Mm.85211	NM_172600	ENSMUSG00000036339	Tmem260	5930435P15|6720456H20Rik	transmembrane protein 260	protein-coding
unique_peak2-34578-4-9--1.34538860874061-1.36011389749466	chr14	67940417	67940830	+	0	NA	intron (NM_010095, intron 7 of 16)	intron (NM_010095, intron 7 of 16)	-7075	NM_001037931	628416	Mm.390723	NM_001037931	ENSMUSG00000075549	Gm6878	EG628416	predicted gene 6878	protein-coding
unique_peak2-39971-1-5--2.2120195109379-1.32905871926422	chrX	150485813	150486210	+	0	NA	intron (NM_030036, intron 2 of 2).3	intron (NM_030036, intron 2 of 2).3	3571	NM_030036	78092	Mm.46855	NM_030036	ENSMUSG00000094802	Samt1	Gm15144|OTTMUSG00000019268	spermatogenesis associated multipass transmembrane protein 1	protein-coding
common_peak2-27702-7-11--0.785871670422967-1.21681515183528	chr3	121820118	121820528	+	0	NA	intron (NM_007378, intron 17 of 49)	intron (NM_007378, intron 17 of 49)	72945	NM_007378	11304	Mm.3918	NM_007378	ENSMUSG00000028125	Abca4	AW050280|Abc10|Abcr|D430003I15Rik|RmP	ATP-binding cassette, sub-family A (ABC1), member 4	protein-coding
common_peak1-14110-8-8--0.164702583494742-1.00793137938329	chr2	127133766	127134348	+	0	NA	Intergenic	Tigger2b|DNA|MER2_type	-27838	NM_010090	13537	Mm.4729	NM_010090	ENSMUSG00000027368	Dusp2	PAC1	dual specificity phosphatase 2	protein-coding
common_peak2-29300-16-18--0.129663871175524-0.307235046933848	chr5	145083574	145084438	+	0	NA	intron (NM_025833, intron 2 of 13)	intron (NM_025833, intron 2 of 13)	-34786	NR_102374	100579137		NR_102372		Dmr	-	Dmrt1 related	ncRNA
unique_peak1-4488-7-5-0.214128329577033-1.01466476204226	chr3	103907239	103907724	+	0	NA	intron (NM_001159354, intron 2 of 20)	intron (NM_001159354, intron 2 of 20)	116848	NM_133853	99470	Mm.264849	NM_133853	ENSMUSG00000052539	Magi3	4732496O19Rik|6530407C02Rik|AA407180|AI120132|mKIAA1634	membrane associated guanylate kinase, WW and PDZ domain containing 3	protein-coding
common_peak2-31110-32-41--0.113225403559101-0.311888488969622	chr8	32989194	32989983	+	0	NA	intron (NM_178591, intron 1 of 8)	intron (NM_178591, intron 1 of 8)	39087	NM_178591	211323	Mm.153432	NM_178591	ENSMUSG00000062991	Nrg1	6030402G23Rik|ARIA|D230005F13Rik|GGF|GGFII|HRG|HRGalpha|Hgl|NDF|SMDF	neuregulin 1	protein-coding
common_peak1-16931-11-14--0.398197011356905-0.379391706698377	chr6	83101336	83101902	+	0	NA	intron (NM_133641, intron 11 of 11)	intron (NM_133641, intron 11 of 11)	4754	NM_023790	75659	Mm.130665	NM_023790		Wdr54	1700030E05Rik	WD repeat domain 54	protein-coding
unique_peak1-974-23-4-2.39983940962172-4.21583923654667	chr11	62623248	62624335	+	0	NA	Intergenic	Intergenic	-9964	NM_053169	94092	Mm.117087	NM_053169	ENSMUSG00000047821	Trim16	9130006M08Rik|AI482483|EBBP	tripartite motif-containing 16	protein-coding
common_peak2-30965-30-39--0.15225268539549-0.327094617740873	chr8	111033635	111034440	+	0	NA	Intergenic	MTD|LTR|MaLR	74540	NR_077224	109215	Mm.65282	NR_077224		3010033K07Rik	-	RIKEN cDNA 3010033K07 gene	ncRNA
common_peak1-14902-36-99--1.16453510360697-4.80759789460922	chr3	96575910	96577687	+	0	NA	intron (NM_026406, intron 3 of 8)	L1MB7|LINE|L1	41646	NM_018767	54215	Mm.34693	NM_018767	ENSMUSG00000038304	Cd160	AU045688|By55	CD160 antigen	protein-coding
common_peak2-29291-15-15-0.0121647505556561-0.30803596071496	chr5	144126075	144126746	+	0	NA	intron (NM_133355, intron 1 of 20)	intron (NM_133355, intron 1 of 20)	823	NM_133355	170935	Mm.197460	NM_133355	ENSMUSG00000010825	Grid2ip	-	glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein 1	protein-coding
unique_peak1-7418-6-0-2.5653981103803-2.10720996964787	chrX	142464240	142464747	+	0	NA	Intergenic	Intergenic	-542311	NM_153319	27494	Mm.100068	NM_153319	ENSMUSG00000041688	Amot	CAG-2|D0Kist1|Sii6	angiomotin	protein-coding
unique_peak2-39557-1-7--2.62705701021674-1.80617997398389	chr9	70260467	70260800	+	0	NA	intron (NM_007630, intron 5 of 8)	intron (NM_007630, intron 5 of 8)	-7073	NR_049200	100885839		NR_049200	miRBase:MI0019195	Mir5626	mmu-mir-5626	microRNA mir-5626	ncRNA
common_peak2-19943-28-30-0.0987628094345876-0.332062764479303	chr1	130735109	130736171	+	0	NA	Intergenic	B4A|SINE|B4	-246764	NM_009911	12767	Mm.1401	NM_009911	ENSMUSG00000045382	Cxcr4	CD184|Cmkar4|LESTR|PB-CKR|PBSF/SDF-1|Sdf1r|b2b220Clo	chemokine (C-X-C motif) receptor 4	protein-coding
common_peak2-19644-30-53--0.585212092671595-1.01050013482523	chr1	43163114	43164565	+	0	NA	intron (NM_133818, intron 2 of 3)	Lx3_Mus|LINE|L1	8284	NM_133818	98404	Mm.28817	NM_133818	ENSMUSG00000010290	AI597479	-	expressed sequence AI597479	protein-coding
unique_peak1-2235-15-3-2.01216475055566-3.03427613622886	chr15	76273345	76274036	+	0	NA	exon (NM_175457, exon 33 of 44)	exon (NM_175457, exon 33 of 44)	10046	NR_105919	102465576		NR_105919		Mir6954	mmu-mir-6954	microRNA mir-6954	ncRNA
common_peak2-27451-7-10--0.660340788339108-1.12966497611638	chr3	90254320	90254711	+	0	NA	TTS (NM_008727)	TTS (NM_008727)	15273	NM_008727	18160	Mm.4627	NM_008727	ENSMUSG00000027931	Npr1	AI893888|GC-A|NPR-A|NPRA|Pndr	natriuretic peptide receptor 1	protein-coding
common_peak2-23871-13-7-0.778472030637769-0.817533494790411	chr15	102674189	102674608	+	0	NA	Intergenic	Intergenic	-77164	NM_010464	15422	Mm.207062	NM_010464	ENSMUSG00000001655	Hoxc13	-	homeobox C13	protein-coding
common_peak1-10160-7-8--0.370834171144123-1.00793137938329	chr13	37751670	37752188	+	0	NA	Intergenic	(GGA)n|Simple_repeat|Simple_repeat	-165978	NM_026830	68750	Mm.491109	NM_026830	ENSMUSG00000039087	Rreb1	1110037N09Rik|AA414966|B930013M22Rik	ras responsive element binding protein 1	protein-coding
unique_peak2-38494-5-4--0.0263084308932156-0.909929411522249	chr7	35348893	35349173	+	0	NA	Intergenic	LTRIS_Mm|LTR|ERV1	88827	NM_146188	233107	Mm.486198	NM_146188	ENSMUSG00000030499	Kctd15	BC031749	potassium channel tetramerisation domain containing 15	protein-coding
unique_peak2-34857-9-11--0.395349094316936-0.344532117358383	chr15	76871085	76871752	+	0	NA	intron (NM_013593, intron 1 of 3)	PB1D10|SINE|Alu	-4087	NM_001163621	71939	Mm.34173	NM_028010	ENSMUSG00000033576	Apol6	2310076O14Rik	apolipoprotein L 6	protein-coding
common_peak1-10142-23-8-1.55184250306677-2.47979361197949	chr13	34154334	34155117	+	0	NA	intron (NM_026512, intron 5 of 6)	intron (NM_026512, intron 5 of 6)	15152	NM_009450	22151	Mm.422827	NM_009450	ENSMUSG00000058672	Tubb2a	M(beta)2|Tubb2	tubulin, beta 2A class IIA	protein-coding
common_peak2-32127-15-15-0.0121647505556561-0.30803596071496	chr9	105495229	105495743	+	0	NA	Intergenic	Intergenic	-49839	NM_001081309	75669	Mm.274830	NM_029380	ENSMUSG00000032571	Pik3r4	2210010O15Rik|C730038E05Rik|C85833|D9Ertd418e	phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 4, p150	protein-coding
unique_peak1-3-11-0-3.50869358425161-3.61235994796777	chr1	173407918	173408499	+	0	NA	Intergenic	Intergenic	-25401	NM_019484	56009	Mm.389208	NM_019484	ENSMUSG00000060244	Alyref2	C130042O11Rik|REF2|Refbp2	Aly/REF export factor 2	protein-coding
common_peak1-9643-13-10-0.319040412000471-0.446472590016315	chr12	70712837	70713398	+	0	NA	intron (NM_001135559, intron 12 of 22)	B1_Mus1|SINE|Alu	-29102	NM_001033236	207965	Mm.102487	NM_001033236	ENSMUSG00000049882	Vcpkmt	Gm71|Mettl21d|Mettl221d|VCP-KMT	valosin containing protein lysine (K) methyltransferase	protein-coding
unique_peak2-32900-6-15--1.4346018896197-1.16633110333236	chr10	19014875	19015340	+	0	NA	Intergenic	Intergenic	-61238	NM_053008	94222	Mm.156946	NM_053008	ENSMUSG00000045591	Olig3	Bhlhb7|bHLHe20	oligodendrocyte transcription factor 3	protein-coding
common_peak2-32286-15-15-0.0121647505556561-0.30803596071496	chrX	20704123	20704905	+	0	NA	Intergenic	Intergenic	-38159	NM_183185	245368	Mm.220470	NM_183185	ENSMUSG00000031079	Zfp300	D930016N04Rik	zinc finger protein 300	protein-coding
common_peak2-24828-19-29--0.504203268946832-0.580176690544129	chr17	72828683	72829355	+	0	NA	intron (NM_007439, intron 1 of 28)	LTRIS2|LTR|ERV1	124628	NM_007439	11682	Mm.311854	NM_007439	ENSMUSG00000055471	Alk	CD246|Tcrz	anaplastic lymphoma kinase	protein-coding
common_peak2-20235-31-54--0.556121042711537-0.994719720785867	chr1	181841883	181843262	+	0	NA	Intergenic	Intergenic	-48648	NM_001033285	226751	Mm.259655	NM_001033285	ENSMUSG00000026490	Cdc42bpa	A930014J19Rik|DMPK-like	CDC42 binding protein kinase alpha	protein-coding
common_peak1-17914-34-80--0.957781475883358-2.91445928041772	chr7	126199746	126200697	+	0	NA	Intergenic	Intergenic	-61496	NM_001195774	64297	Mm.103439	NM_022420	ENSMUSG00000008734	Gprc5b	AW125761|Raig2	G protein-coupled receptor, family C, group 5, member B	protein-coding
unique_peak2-32658-2-5--1.50241675698448-1.08602067057793	chr1	133800614	133800969	+	0	NA	Intergenic	Lx8|LINE|L1	-6244	NM_175294	98415	Mm.246869	NM_175294	ENSMUSG00000026434	Nucks1	2700010L10Rik|8430423A01Rik|AI647518|C78391|Nucks	nuclear casein kinase and cyclin-dependent kinase substrate 1	protein-coding
common_peak2-19730-7-7--0.200909169701811-0.97990265578305	chr1	72465039	72465479	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	111264	NM_009533	22596	Mm.246952	NM_009533	ENSMUSG00000026187	Xrcc5	AI314015|Ku80|Ku86	X-ray repair complementing defective repair in Chinese hamster cells 5	protein-coding
common_peak1-11886-10-13--0.450939577048835-0.386243247519795	chr16	97495491	97496039	+	0	NA	Intergenic	Intergenic	-82570	NM_019517	56175	Mm.97885	NM_019517	ENSMUSG00000040605	Bace2	1110059C24Rik|AEPLC|AI850424|ALP56|ARP1|ASP21|BAE2|CDA13|CEAP1|DRAP	beta-site APP-cleaving enzyme 2	protein-coding
unique_peak1-2738-11-4-1.18676548936425-1.68134727924692	chr16	97697831	97698411	+	0	NA	intron (NM_020622, intron 4 of 7)	intron (NM_020622, intron 4 of 7)	-13608	NR_003520	17857	Mm.33996	NM_010846	ENSMUSG00000000386	Mx1	AI893580|Mx|Mx-1	MX dynamin-like GTPase 1	protein-coding
common_peak1-12919-12-10-0.189344366450341-0.386243247519795	chr18	90579654	90580328	+	0	NA	Intergenic	B1F|SINE|Alu	-99555	NM_198295	67988	Mm.268041	NM_198295	ENSMUSG00000024614	Tmx3	6430411B10Rik|A730024F05Rik|AV259382|Txndc10|mKIAA1830	thioredoxin-related transmembrane protein 3	protein-coding
common_peak1-9825-9-9--0.132314688483142-1.03275496310833	chr12	71883779	71884280	+	0	NA	Intergenic	Intergenic	-42472	NM_028127	319710	Mm.2962	NM_028127	ENSMUSG00000048285	Frmd6	2610019M19Rik|4930488L10Rik|AW212977	FERM domain containing 6	protein-coding
common_peak1-15223-96-161--0.173798788529296-0.506892575252314	chr4	143211934	143213410	+	0	NA	Intergenic	IAPLTR2a|LTR|ERVK	7766	NM_001126324	279185	Mm.441604	NM_001126324	ENSMUSG00000066688	Gm13083	OTTMUSG00000010327	predicted gene 13083	protein-coding
unique_peak2-39020-7-4-0.477162735410827-1.09384600808989	chr8	57499725	57500041	+	0	NA	Intergenic	Intergenic	885878	NM_175939	244486	Mm.67684	NM_175939	ENSMUSG00000046258	Adam29	-	a disintegrin and metallopeptidase domain 29	protein-coding
unique_peak2-38756-5-9--1.02630843089322-1.21398586181642	chr7	120634157	120634729	+	0	NA	Intergenic	L1Md_T|LINE|L1	-22905	NM_001285831	67420	Mm.206919	NM_026143	ENSMUSG00000030759	Far1	2600011M19Rik|2900034E22Rik|3732409C05Rik|AI850429|Mlstd2	fatty acyl CoA reductase 1	protein-coding
common_peak1-10731-51-45-0.55136186954556-1.24554587181539	chr14	65097264	65098577	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-23180	NM_026322	110265	Mm.26713	NM_026322	ENSMUSG00000054733	Msra	2310045J23Rik|6530413P12Rik|MSR-A	methionine sulfoxide reductase A	protein-coding
unique_peak2-38861-5-13--1.51173525806346-1.78669045979184	chr7	145055954	145056589	+	0	NA	Intergenic	B3|SINE|B2	426914	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
common_peak1-17778-12-8-0.478850983645327-0.562038191119709	chr7	97341349	97342083	+	0	NA	intron (NM_001252524, intron 16 of 18)	intron (NM_001252524, intron 16 of 18)	62974	NM_001252520	233489	Mm.235175	NM_146194	ENSMUSG00000039361	Picalm	CALM|CLTH|PAP180|fit-1|fit1|mKIAA4114	phosphatidylinositol binding clathrin assembly protein	protein-coding
unique_peak1-2000-20-5-1.90311228387004-2.81016724606745	chr15	100318383	100319457	+	0	NA	intron (NM_153407, intron 2 of 4)	intron (NM_153407, intron 2 of 4)	6750	NM_153407	207785	Mm.294969	NM_153407	ENSMUSG00000044636	Csrnp2	CSRNP-2|Csnrp2|taip-12	cysteine-serine-rich nuclear protein 2	protein-coding
common_peak2-31934-26-20-0.535581669379702-0.738267116931592	chr9	63726128	63727020	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-120773	NM_016769	17127	Mm.7320	NM_016769	ENSMUSG00000032402	Smad3	AU022421|Madh3	SMAD family member 3	protein-coding
common_peak1-10474-14-20--0.493101262421116-0.456667090758524	chr13	112926880	112927549	+	0	NA	Intergenic	ORR1B2|LTR|MaLR	-151445	NM_001168403	77318	Mm.159895	NM_029898	ENSMUSG00000049985	Ankrd55	C030011J08Rik	ankyrin repeat domain 55	protein-coding
common_peak1-9859-19-23--0.18227517405947-0.320777457303847	chr12	80260536	80261383	+	0	NA	intron (NM_016800, intron 4 of 5)	RMER4B|LTR|ERVK	12486	NM_016800	53612	Mm.265929	NM_016800	ENSMUSG00000021124	Vti1b	AU015348|GES30|MVti1b|SNARE|Vti1-rp1	vesicle transport through interaction with t-SNAREs 1B	protein-coding
common_peak1-8476-16-28--0.73971735285951-0.890873221665474	chr10	80386704	80387585	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	-5692	NM_008655	17873	Mm.1360	NM_008655	ENSMUSG00000015312	Gadd45b	AI323528|Myd118	growth arrest and DNA-damage-inducible 45 beta	protein-coding
common_peak1-12188-8-9--0.316705676939792-1.03275496310833	chr17	31937297	31937824	+	0	NA	Intergenic	Intergenic	55177	NM_010831	17691	Mm.290941	NM_010831	ENSMUSG00000024042	Sik1	Msk|Sik|Snf1lk	salt inducible kinase 1	protein-coding
common_peak1-7457-97-108-0.415816746715356-1.48025295783121	chr1	88276177	88278425	+	0	NA	Intergenic	Intergenic	7415	NM_010341	14767	Mm.389159	NM_010341	ENSMUSG00000026237	Nmur1	FM-3|Gpr66|NMU-R1|NMU1R|NmU-R	neuromedin U receptor 1	protein-coding
unique_peak2-32587-4-6--0.830815435910851-0.989110657569874	chr1	89570098	89570576	+	0	NA	intron (NR_122078, intron 5 of 27)	intron (NR_122078, intron 5 of 27)	53450	NM_001110193	16331	Mm.15105	NM_010566	ENSMUSG00000026288	Inpp5d	SHIP|SHIP-1|SHIP1|SIP-145|p150Ship|s-SHIP	inositol polyphosphate-5-phosphatase D	protein-coding
unique_peak1-5164-9-1-2.18961340640422-2.31132995230379	chr5	25612670	25612991	+	0	NA	Intergenic	Intergenic	346986	NM_001004365	242894	Mm.150319	NM_001004365	ENSMUSG00000056367	Actr3b	9630005C02|ARP11|AW047569|Arp3b|Arp3beta	ARP3 actin-related protein 3B	protein-coding
unique_peak2-38206-5-6--0.511735258063458-0.947717972411649	chr6	113023604	113023971	+	0	NA	intron (NR_027010, intron 1 of 2)	intron (NR_027010, intron 1 of 2)	3451	NR_027010	14910	Mm.280950	NR_027008	ENSMUSG00000086429	Gt(ROSA)26Sor	AV258896|Gtrgeo26|Gtrosa26|R26|ROSA26	gene trap ROSA 26, Philippe Soriano	ncRNA
unique_peak1-1329-14-4-1.57728806547028-2.4322161449009	chr12	8521147	8521783	+	0	NA	Intergenic	Intergenic	-14674	NM_007483	11852	Mm.687	NM_007483	ENSMUSG00000054364	Rhob	AA017882|Arh6|Arhb	ras homolog gene family, member B	protein-coding
unique_peak1-5750-12-7-0.648775985087639-0.697979855752659	chr6	50354947	50355585	+	0	NA	intron (NM_001163645, intron 2 of 21)	intron (NM_001163645, intron 2 of 21)	-22430	NM_027881	71720	Mm.44153	NM_027881	ENSMUSG00000029822	Osbpl3	1200014M06Rik|6720421I08Rik|A530055M08|ORP3|OSBP3	oxysterol binding protein-like 3	protein-coding
common_peak1-8641-15-27--0.795190171501948-0.918917574080418	chr10	122096403	122097212	+	0	NA	Intergenic	RSINE1|SINE|B4	-19011	NM_176919	319468	Mm.489703	NM_176919	ENSMUSG00000034613	Ppm1h	A430075L18Rik|ARHCL1|C030002B11Rik	protein phosphatase 1H (PP2C domain containing)	protein-coding
common_peak1-19052-20-30--0.466121525795682-0.569352520859861	chr9	66350399	66351137	+	0	NA	intron (NM_145617, intron 76 of 77)	intron (NM_145617, intron 76 of 77)	11632	NM_175206	74165	Mm.297998	NM_175206	ENSMUSG00000050503	Fbxl22	1110004B15Rik	F-box and leucine-rich repeat protein 22	protein-coding
common_peak1-8592-25-14-0.954959309736587-1.46151065785802	chr10	108446002	108446888	+	0	NA	intron (NM_001252341, intron 1 of 11)	intron (NM_001252341, intron 1 of 11)	1586	NM_009306	20979	Mm.289702	NM_009306	ENSMUSG00000035864	Syt1	AW124717|G630098F17Rik|SytI	synaptotagmin I	protein-coding
unique_peak1-6010-7-0-2.79909083029819-2.40823996531185	chr6	108305063	108305549	+	0	NA	intron (NM_010585, intron 8 of 61)	MIRm|SINE|MIR	-134431	NR_106121	102465766		NR_106121		Mir7661	mmu-mir-7661	microRNA mir-7661	ncRNA
unique_peak2-37710-5-16--1.79184317725619-1.61682445937017	chr5	104055036	104055610	+	0	NA	intron (NM_029415, intron 1 of 5)	B1_Mus2|SINE|Alu	3099	NM_029415	75750	Mm.7446	NM_029415	ENSMUSG00000029321	Slc10a6	8430417G17Rik|C78479|Soat	solute carrier family 10 (sodium/bile acid cotransporter family), member 6	protein-coding
common_peak2-29005-9-6-0.382258484346616-1.11707584880836	chr5	109996145	109996560	+	0	NA	Intergenic	Intergenic	-8340	NM_001164735	57914	Mm.35771	NM_016715	ENSMUSG00000033467	Crlf2	CRLM2|Ly114|Tpte2|Tslpr	cytokine receptor-like factor 2	protein-coding
unique_peak1-892-11-0-3.50869358425161-3.61235994796777	chr11	33700097	33700785	+	0	NA	intron (NM_001190885, intron 1 of 8)	L2a|LINE|L2	43144	NM_027398	70357	Mm.252514	NM_027398	ENSMUSG00000053519	Kcnip1	KCHIP1|Kchip1.2	Kv channel-interacting protein 1	protein-coding
unique_peak2-35517-5-6--0.511735258063458-0.947717972411649	chr17	49751360	49751776	+	0	NA	Intergenic	Intergenic	-2929	NM_177052	319991	Mm.441340	NM_177052	ENSMUSG00000023999	Kif6	D130004B10Rik|D130084M03Rik	kinesin family member 6	protein-coding
unique_peak1-4510-12-1-2.64877598508764-3.36932189928148	chr3	24333009	24333527	+	0	NA	Intergenic	B4A|SINE|B4	1718961	NM_001163387	192167	Mm.316080	NM_138666	ENSMUSG00000063887	Nlgn1	6330415N05Rik|BB179718|NL1|Nlg1|mKIAA1070	neuroligin 1	protein-coding
common_peak1-10043-12-11-0.0638134843664826-0.337263207250336	chr13	17212742	17213470	+	0	NA	intron (NM_138654, intron 12 of 13)	intron (NM_138654, intron 12 of 13)	573493	NM_138654	192136	Mm.364180	NM_138654		Sugct	5033411D12Rik|D17907	succinyl-CoA glutarate-CoA transferase	protein-coding
common_peak1-8903-84-72-0.745109500009008-3.13115263338306	chr11	50211886	50214169	+	0	NA	intron (NM_172557, intron 12 of 17)	ORR1A4|LTR|MaLR	21806	NM_021510	59013	Mm.21740	NM_021510	ENSMUSG00000007850	Hnrnph1	AI642080|E430005G16Rik|Hnrnph|Hnrph1	heterogeneous nuclear ribonucleoprotein H1	protein-coding
unique_peak1-5186-9-4-0.867685311516858-1.36011389749466	chr5	31451560	31452064	+	0	NA	intron (NM_008622, intron 2 of 7)	G-rich|Low_complexity|Low_complexity	4741	NM_001294324	17527	Mm.435472	NM_008622	ENSMUSG00000090262	Mpv17	Tg.Mpv17	MpV17 mitochondrial inner membrane protein	protein-coding
common_peak2-30929-4-7--1.02346051385325-1.09384600808989	chr7	145025000	145025415	+	0	NA	Intergenic	Intergenic	395850	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
common_peak2-23826-174-176-0.731133393539232-6.80347940441254	chr15	101328142	101332713	+	0	NA	Intergenic	Intergenic	-3820	NR_002872	574415	Mm.491077	NR_002872		Gm6042	EG574415|Kb32p	type II keratin Kb32P	pseudo
common_peak2-25046-10-6-0.549060422951165-1.21398586181642	chr18	32055398	32055831	+	0	NA	intron (NM_028866, intron 17 of 21)	B1_Mur2|SINE|Alu	15943	NM_026006	67158	Mm.31537	NM_026006	ENSMUSG00000044982	Sft2d3	2610206C24Rik|AI847965|AW046173	SFT2 domain containing 3	protein-coding
common_peak1-8331-18-10-0.853487532591054-1.03889213727317	chr10	43983046	43983854	+	0	NA	Intergenic	Intergenic	-4714	NM_053069	11793	Mm.22264	NM_053069	ENSMUSG00000038160	Atg5	2010107M05Rik|3110067M24Rik|AW319544|Apg5l|Atg5l|C88337|Paddy	autophagy related 5	protein-coding
unique_peak2-36193-1-13--3.43441193227435-3.36932189928148	chr2	31670650	31671183	+	0	NA	3' UTR (NM_178887, exon 7 of 7)	3' UTR (NM_178887, exon 7 of 7)	-4878	NM_183424	227717	Mm.185027	NM_183424	ENSMUSG00000043102	Qrfp	P518	pyroglutamylated RFamide peptide	protein-coding
common_peak1-10288-9-4-0.867685311516858-1.36011389749466	chr13	63163675	63164244	+	0	NA	intron (NM_001289926, intron 4 of 15)	intron (NM_001289926, intron 4 of 15)	97706	NM_001289924	72061	Mm.188105	NM_028079	ENSMUSG00000021458	2010111I01Rik	2300006M17Rik|AP-O|Aopep	RIKEN cDNA 2010111I01 gene	protein-coding
unique_peak1-836-16-8-0.948338640825749-1.02063122982878	chr11	8701001	8701777	+	0	NA	Intergenic	Intergenic	-136851	NM_001083587	319939	Mm.337820	NM_001083587	ENSMUSG00000020422	Tns3	BC023928|F830010I22Rik|TEM6|Tens1	tensin 3	protein-coding
unique_peak2-34004-1-4--1.94898510510411-1.10720996964787	chr12	100168334	100168692	+	0	NA	intron (NM_029553, intron 1 of 13)	L1VL4|LINE|L1	9691	NM_198311	76260	Mm.282660	NM_029553	ENSMUSG00000021013	Ttc8	0610012F22Rik|AV001447|BBS8	tetratricopeptide repeat domain 8	protein-coding
common_peak2-32198-27-72--1.19827860798478-3.72942130693321	chr9	119894581	119895616	+	0	NA	Intergenic	Intergenic	-1322	NM_153287	215418	Mm.491094	NM_153287	ENSMUSG00000032515	Csrnp1	4931429D10Rik|Axud1|CSRNP-1|URAX1|taip-3	cysteine-serine-rich nuclear protein 1	protein-coding
common_peak2-26122-3-4--0.73591118484664-0.864171920961574	chr2	6319952	6320194	+	0	NA	intron (NM_181399, intron 3 of 13)	intron (NM_181399, intron 3 of 13)	46291	NM_181399	98910	Mm.40673	NM_181399	ENSMUSG00000039046	Usp6nl	AI316785|RNTRE|TRE2NL|mKIAA0019	USP6 N-terminal like	protein-coding
common_peak1-17100-92-66-1.02626289324499-5.67930377568301	chr6	113306459	113308216	+	0	NA	Intergenic	ID_B1|SINE|B4	-13421	NM_133926	52163	Mm.277373	NM_133926	ENSMUSG00000030272	Camk1	AI505105|CaMKIalpha|D6Ertd263e	calcium/calmodulin-dependent protein kinase I	protein-coding
common_peak2-24152-48-48-0.356217307119606-0.742542878650758	chr16	38549687	38550685	+	0	NA	exon (NM_172380, exon 1 of 11)	exon (NM_172380, exon 1 of 11)	152	NM_172380	224143	Mm.284366	NM_172380	ENSMUSG00000034064	Poglut1	9630046K23Rik|Clp46|Ktelc1|Rumi	protein O-glucosyltransferase 1	protein-coding
unique_peak2-35653-8-18--1.24270509549601-1.15812782348128	chr18	4199074	4199348	+	0	NA	Intergenic	Intergenic	33381	NM_026092	67328	Mm.158148	NM_026092	ENSMUSG00000024233	Lyzl1	1700038F02Rik|Lyc2	lysozyme-like 1	protein-coding
common_peak2-22790-10-9-0.0344872501214071-1.05503135781948	chr14	7851487	7851965	+	0	NA	intron (NM_001164727, intron 2 of 6)	intron (NM_001164727, intron 2 of 6)	8237	NM_001164727	100038847	Mm.443041	NM_001164727	ENSMUSG00000093985	Gm10406	ENSMUSG00000072735	predicted gene 10406	protein-coding
unique_peak2-35589-7-15--1.20090916970181-0.947446088118041	chr17	75551207	75551796	+	0	NA	intron (NM_019919, intron 4 of 33)	intron (NM_019919, intron 4 of 33)	-26649	NM_206958	268977	Mm.269747	NM_019919	ENSMUSG00000001870	Ltbp1	9430031G15Rik|9830146M04|Ltbp-1|Tgfb|b2b1000Clo	latent transforming growth factor beta binding protein 1	protein-coding
unique_peak2-32665-4-11--1.6084230145744-1.68134727924692	chr1	135374603	135374975	+	0	NA	Intergenic	Intergenic	-54000	NM_011439	20668	Mm.8575	NM_011439	ENSMUSG00000070643	Sox13	AA407916|AW259412|AW540933|Sox-13	SRY (sex determining region Y)-box 13	protein-coding
common_peak2-23043-9-15--0.81038659359578-0.630231561310125	chr14	69498463	69499284	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-148473	NM_009285	20855	Mm.20911	NM_009285	ENSMUSG00000014813	Stc1	Stc	stanniocalcin 1	protein-coding
common_peak2-28237-80-82-0.475536335022428-1.50708012376454	chr4	122886190	122887401	+	0	NA	intron (NM_001085502, intron 3 of 5)	ID_B1|SINE|B4	7999	NM_001085502	230718	Mm.354635	NM_001085502	ENSMUSG00000054958	Nt5c1a	Cn1a|Gm49	5'-nucleotidase, cytosolic IA	protein-coding
common_peak2-29894-36-36-0.269867720538804-0.51862626278861	chr6	113343499	113344486	+	0	NA	intron (NM_133923, intron 2 of 12)	intron (NM_133923, intron 2 of 12)	1501	NM_133923	101100	Mm.388573	NM_133923	ENSMUSG00000030276	Ttll3	4833441J24Rik|AI450050	tubulin tyrosine ligase-like family, member 3	protein-coding
common_peak1-8070-42-14-1.83543873225867-5.75551916672625	chr1	177622742	177624021	+	0	NA	promoter-TSS (NM_010098)	promoter-TSS (NM_010098)	-618	NM_010098	13603	Mm.32744	NM_010098	ENSMUSG00000026525	Opn3	ERO|Ecpn	opsin 3	protein-coding
unique_peak2-33880-5-6--0.511735258063458-0.947717972411649	chr12	30584514	30584918	+	0	NA	intron (NM_001093776, intron 21 of 24)	MLT1A|LTR|MaLR	-38185	NM_181395	69675	Mm.251774	NM_181395	ENSMUSG00000020674	Pxdn	2310075M15Rik|C85409|E330004E07|VPO1|mKIAA0230	peroxidasin homolog (Drosophila)	protein-coding
common_peak2-28467-14-12-0.198776442216552-0.373562084705529	chr4	153956659	153957149	+	0	NA	intron (NM_027504, intron 1 of 16)	intron (NM_027504, intron 1 of 16)	53572	NR_045643	320939	Mm.436738	NR_045643		5930403L14Rik	-	RIKEN cDNA 5930403L14 gene	ncRNA
common_peak2-28986-48-62--0.00635277226510222-0.302767192121929	chr5	105876277	105877262	+	0	NA	intron (NM_001033550, intron 1 of 4)	L1Md_T|LINE|L1	31975	NM_001033550	433926	Mm.439781	NM_001033550	ENSMUSG00000070639	Lrrc8b	R75581|Ta-lrrp|mKIAA0231	leucine rich repeat containing 8 family, member B	protein-coding
unique_peak1-4946-10-2-1.77145284428761-2.09384600808989	chr4	94979691	94980186	+	0	NA	Intergenic	Lx7|LINE|L1	-244260	NM_001113412	75578	Mm.276098	NM_029347	ENSMUSG00000028573	Fggy	2310009E04Rik	FGGY carbohydrate kinase domain containing	protein-coding
common_peak2-21723-7-7--0.200909169701811-0.97990265578305	chr11	113101143	113101515	+	0	NA	Intergenic	MTD|LTR|MaLR	-30346	NR_040276	319871	Mm.383743	NR_040276	ENSMUSG00000085421	4732490B19Rik	-	RIKEN cDNA 4732490B19 gene	ncRNA
common_peak1-10113-10-9-0.0344872501214071-1.05503135781948	chr13	29985205	29985736	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-38013	NM_144536	68916	Mm.212227	NM_144536	ENSMUSG00000006191	Cdkal1	1190005B03Rik|6620401C13Rik	CDK5 regulatory subunit associated protein 1-like 1	protein-coding
common_peak2-28764-18-24--0.330937038546373-0.380101753845076	chr5	45520173	45520957	+	0	NA	Intergenic	MTE-int|LTR|MaLR	163125	NR_073013	75783	Mm.218472	NR_073013		4930431F12Rik	-	RIKEN cDNA 4930431F12 gene	ncRNA
unique_peak2-39263-7-40--2.55846117431989-5.85892640211067	chr8	119895676	119896665	+	0	NA	intron (NM_028941, intron 1 of 20)	intron (NM_028941, intron 1 of 20)	23100	NM_028941	74440	Mm.233181	NM_028941	ENSMUSG00000034390	Cmip	4933407C03Rik|5830471E12Rik|AI314065|AI464126	c-Maf inducing protein	protein-coding
common_peak2-26145-6-5--0.0195643903408542-0.947717972411649	chr2	13976739	13976986	+	0	NA	intron (NM_001012396, intron 1 of 5)	CpG	800	NM_001012396	30963	Mm.241205	NM_013935	ENSMUSG00000063275	Ptpla	HACD1	protein tyrosine phosphatase-like (proline instead of catalytic arginine), member a	protein-coding
common_peak2-24429-13-29--1.12841856497075-1.46151065785802	chr17	20944253	20945165	+	0	NA	Intergenic	Lx2B|LINE|L1	-6750	NM_134190	171224	Mm.377183	NM_134190	ENSMUSG00000061150	Vmn1r229	V1re1	vomeronasal 1 receptor 229	protein-coding
common_peak2-20865-13-6-0.971117108580164-1.01572999746118	chr11	96747255	96747661	+	0	NA	Intergenic	Intergenic	30337	NM_030248	80280	Mm.28297	NM_030248	ENSMUSG00000018669	Cdk5rap3	1810007E24Rik|BC002318|C53|C81486|HSF-27|IC53|MST016	CDK5 regulatory subunit associated protein 3	protein-coding
common_peak1-9884-25-30--0.0923464050417691-0.304710633611958	chr12	84996071	84996994	+	0	NA	intron (NM_027349, intron 6 of 18)	intron (NM_027349, intron 6 of 18)	23348	NM_027349	67039	Mm.46005	NM_027349	ENSMUSG00000010608	Rbm25	2600011C06Rik|2610015J01Rik|A130095G20Rik|AI159652|AL023075|AU043498|RNPC7	RNA binding motif protein 25	protein-coding
common_peak1-11230-20-11-0.903112283870037-1.11267835143409	chr15	79377841	79378910	+	0	NA	Intergenic	ID_B1|SINE|B4	-1204	NM_199080	67040	Mm.29644	NM_152806	ENSMUSG00000055065	Ddx17	2610007K22Rik|A430025E01Rik|AI047725|C80929|Gm926|p72	DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	protein-coding
unique_peak2-39707-2-5--1.50241675698448-1.08602067057793	chr9	116153065	116153496	+	0	NA	Intergenic	Intergenic	-68799	NM_009371	21813	Mm.172346	NM_009371	ENSMUSG00000032440	Tgfbr2	1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII	transforming growth factor, beta receptor II	protein-coding
common_peak1-18671-60-58-0.47164881225869-1.19886391578317	chr8	118349436	118351082	+	0	NA	Intergenic	Intergenic	-119465	NM_001025577	17132	Mm.275549	NM_001025577		Maf	2810401A20Rik|A230108G15Rik|AW047063|c-maf	avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog	protein-coding
common_peak1-12133-34-14-1.47517793139275-3.48244293670685	chr17	27153365	27154578	+	0	NA	Intergenic	Intergenic	-1009	NM_001251881	70772	Mm.440437	NM_027544	ENSMUSG00000048731	Ggnbp1	0610031G08Rik|mdf	gametogenetin binding protein 1	protein-coding
common_peak1-10362-58-77-0.0105477160282481-0.306598026174992	chr13	91223514	91224687	+	0	NA	intron (NM_025770, intron 3 of 7)	intron (NM_025770, intron 3 of 7)	139492	NM_025770	66795	Mm.235385	NM_025770	ENSMUSG00000021619	Atg10	5330424L23Rik|5430428K15Rik|AI852123|APG10|Agp10|Apg10l|Apg10p|Atg10l	autophagy related 10	protein-coding
unique_peak2-39844-6-9--0.75652998450706-1.11707584880836	chrX	53369911	53370423	+	0	NA	Intergenic	L1Md_T|LINE|L1	-19582	NM_027510	70691	Mm.335676	NM_027510	ENSMUSG00000031125	3830403N18Rik	Xlrl	RIKEN cDNA 3830403N18 gene	protein-coding
common_peak2-24196-17-18--0.0296311752385474-0.306899554715732	chr16	58512873	58513712	+	0	NA	intron (NM_018784, intron 1 of 10)	intron (NM_018784, intron 1 of 10)	10133	NM_018784	54613	Mm.212742	NM_018784	ENSMUSG00000022747	St3gal6	1700023B24Rik|AI930218|AW552396|Siat10|St3galVI	ST3 beta-galactoside alpha-2,3-sialyltransferase 6	protein-coding
common_peak2-19923-18-15-0.312919151228352-0.456667090758524	chr1	125693976	125694467	+	0	NA	intron (NM_199021, intron 3 of 25)	intron (NM_199021, intron 3 of 25)	247915	NM_199021	269109	Mm.483255	NM_199021	ENSMUSG00000036815	Dpp10	6430601K09Rik|DPP X|Dprp3	dipeptidylpeptidase 10	protein-coding
unique_peak1-6672-12-7-0.648775985087639-0.697979855752659	chr8	22490284	22491035	+	0	NA	Intergenic	L1VL1|LINE|L1	-23960	NM_007844	13218	Mm.304264	NM_007844	ENSMUSG00000074437	Defa-rs1	2010300L12Rik|2010319H24Rik|CRS1C|CRS1C-2|CRS1C-5|Defcr-rs1	defensin, alpha, related sequence 1	protein-coding
common_peak2-21751-16-14-0.211373046659543-0.364171515310935	chr11	115956763	115957697	+	0	NA	Intergenic	(T)n|Simple_repeat|Simple_repeat	-8952	NM_016852	22378	Mm.284792	NM_016852	ENSMUSG00000034341	Wbp2	-	WW domain binding protein 2	protein-coding
common_peak2-30614-3-6--1.22133801201688-1.08602067057793	chr7	89979883	89980448	+	0	NA	Intergenic	L1MA4|LINE|L1	-35678	NM_175366	108797	Mm.306789	NM_175366	ENSMUSG00000057706	Mex3b	4931439A04Rik|M-04814|Rkhd3|mKIAA2009	mex3 homolog B (C. elegans)	protein-coding
common_peak1-17962-9-10--0.269818212233077-1.05503135781948	chr7	130574923	130575425	+	0	NA	Intergenic	RMER19B|LTR|ERVK	-30634	NM_007474	11833	Mm.273175	NM_007474	ENSMUSG00000030762	Aqp8	AI255744|AQP-8	aquaporin 8	protein-coding
unique_peak2-37073-9-21--1.26981821223308-1.37307999835977	chr3	146404550	146405355	+	0	NA	intron (NM_011100, intron 8 of 9)	intron (NM_011100, intron 8 of 9)	28250	NM_001164198	18749	Mm.16766	NM_011100	ENSMUSG00000005034	Prkacb	Pkacb	protein kinase, cAMP dependent, catalytic, beta	protein-coding
common_peak2-27620-99-177--0.256375687683747-0.823893099442262	chr3	104863717	104865631	+	0	NA	Intergenic	MLT1K|LTR|MaLR	-5088	NM_029228	75269	Mm.307994	NM_029228	ENSMUSG00000051788	4930564D02Rik	-	RIKEN cDNA 4930564D02 gene	protein-coding
unique_peak2-37751-1-12--3.32749672835784-3.1004765869889	chr5	111205853	111206483	+	0	NA	intron (NM_001025561, intron 3 of 6)	B3A|SINE|B2	3447	NM_019700	56361	Mm.23528	NM_019700	ENSMUSG00000029507	Pus1	A730013B20Rik|MPUS1|mPus1p	pseudouridine synthase 1	protein-coding
common_peak2-26045-67-86-0.101467986934267-0.360487696578537	chr2	18676284	18678311	+	0	NA	Intergenic	Intergenic	56648	NM_001001334	381350	Mm.330024	NM_001001334		BC061194	-	cDNA sequence BC061194	protein-coding
common_peak1-16095-12-14--0.25811461052088-0.309074325783021	chr5	64809975	64810605	+	0	NA	Intergenic	ORR1A2-int|LTR|MaLR	48891	NR_040681	69999	Mm.261413	NR_040681		1700027F09Rik	-	RIKEN cDNA 1700027F09 gene	ncRNA
common_peak1-19334-31-105--1.50268178375008-7.67068467037756	chrX	94797432	94798412	+	0	NA	Intergenic	RLTR16|LTR|ERVK	-225374	NM_001161433	245527	Mm.189270	NM_175540	ENSMUSG00000034457	Eda2r	9430060M22Rik|TNFRSF27|Xedar	ectodysplasin A2 receptor	protein-coding
common_peak1-18308-24-27--0.0141450192898871-0.304978344874324	chr8	46686869	46687554	+	0	NA	intron (NM_172752, intron 1 of 22)	intron (NM_172752, intron 1 of 22)	94069	NM_001205219	234214	Mm.211096	NM_172752	ENSMUSG00000031626	Sorbs2	2010203O03Rik|9430041O17Rik|A530071H08|Argbp2|mKIAA0777	sorbin and SH3 domain containing 2	protein-coding
common_peak2-22077-14-21--0.560215458279653-0.519193887192484	chr12	76594039	76594726	+	0	NA	intron (NM_012024, intron 4 of 13)	intron (NM_012024, intron 4 of 13)	-76614	NM_175644	217674	Mm.252250	NM_175644	ENSMUSG00000048982	Gphb5	Zlut1	glycoprotein hormone beta 5	protein-coding
common_peak2-26792-4-6--0.830815435910851-0.989110657569874	chr2	148037318	148037753	+	0	NA	Intergenic	Intergenic	-164830	NM_010446	15376	Mm.938	NM_010446	ENSMUSG00000037025	Foxa2	HNF3-beta|HNF3beta|Hnf-3b|Hnf3b|Tcf-3b|Tcf3b	forkhead box A2	protein-coding
unique_peak2-39037-6-9--0.75652998450706-1.11707584880836	chr8	69654438	69654942	+	0	NA	Intergenic	L1Md_Gf|LINE|L1	270574	NM_001163564	234344	Mm.334561	NM_001163564	ENSMUSG00000014907	Naf1	Gm174	nuclear assembly factor 1 homolog (S. cerevisiae)	protein-coding
common_peak1-11920-28-33--0.0345037214288766-0.301029995664001	chr17	44776907	44777917	+	0	NA	intron (NM_001271631, intron 2 of 4)	intron (NM_001271631, intron 2 of 4)	95713	NR_073425	12393	Mm.391013	NM_009820	ENSMUSG00000039153	Runx2	AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a	runt related transcription factor 2	protein-coding
common_peak1-15060-27-24-0.347689761120511-0.550049347815233	chr3	123267228	123268475	+	0	NA	intron (NR_121616, intron 6 of 13)	B4|SINE|B4	54517	NM_001293682	83398	Mm.443908	NM_031186	ENSMUSG00000027977	Ndst3	4921531K01Rik|4930511P15Rik|N-HSST 3|NDST-3	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	protein-coding
common_peak1-18733-58-66-0.229860744432725-0.554459000578111	chr8	123709676	123711111	+	0	NA	Intergenic	MTD|LTR|MaLR	58808	NM_008024	14241	Mm.5111	NM_008024	ENSMUSG00000097084	Foxl1	FREAC7|Fkh6|fkh-6	forkhead box L1	protein-coding
common_peak1-9198-10-12--0.344024373132323-0.340565874754526	chr11	80183957	80184470	+	0	NA	intron (NM_027472, intron 5 of 9)	RSINE1|SINE|B4	7304	NM_027472	70591	Mm.86860	NM_027472	ENSMUSG00000057181	5730455P16Rik	-	RIKEN cDNA 5730455P16 gene	protein-coding
unique_peak2-39095-2-7--1.91745425626332-1.45399745587252	chr8	77170350	77170879	+	0	NA	Intergenic	Intergenic	-226459	NM_027837	71597	Mm.158735	NM_027837	ENSMUSG00000031621	Isx	9130012O13Rik|Pix-1	intestine specific homeobox	protein-coding
common_peak2-21436-58-60-0.36521259732761-0.866757392601631	chr11	86578641	86580810	+	0	NA	Intergenic	Intergenic	-8731	NM_001003908	67300	Mm.254588	NM_001003908	ENSMUSG00000047126	Cltc	3110065L21Rik|CHC|R74732	clathrin, heavy polypeptide (Hc)	protein-coding
common_peak1-9340-19-10-0.943255708024389-1.16735254179725	chr11	96017502	96018561	+	0	NA	exon (NM_172799, exon 13 of 15)	exon (NM_172799, exon 13 of 15)	22931	NM_172799	237930	Mm.249912	NM_172799	ENSMUSG00000038756	Ttll6	4932418K24Rik|D11Moh43e|D11Moh44e|t8130b59	tubulin tyrosine ligase-like family, member 6	protein-coding
unique_peak1-6296-13-7-0.778472030637769-0.817533494790411	chr7	29908329	29909039	+	0	NA	intron (NM_009109, intron 1 of 105)	MIRb|SINE|MIR	1486	NM_009109	20190	Mm.439745	NM_009109	ENSMUSG00000030592	Ryr1	AI528790|RYR-1|Ryr|skrr	ryanodine receptor 1, skeletal muscle	protein-coding
common_peak2-30137-15-19--0.309763344331706-0.356936432242222	chr6	142345522	142346035	+	0	NA	intron (NM_025872, intron 4 of 4)	intron (NM_025872, intron 4 of 4)	10015	NM_025872	66964	Mm.3676	NM_025872	ENSMUSG00000030245	Golt1b	2310061A22Rik|AA407874|AU024291|CGI-141	golgi transport 1 homolog B (S. cerevisiae)	protein-coding
unique_peak1-3244-11-0-3.50869358425161-3.61235994796777	chr18	64336721	64337303	+	0	NA	intron (NR_045366, intron 2 of 5)	MLT1C|LTR|MaLR	-77001	NM_009182	20451	Mm.252110	NM_009182	ENSMUSG00000056812	St8sia3	AI847333|ST8SiaIII|Siat8c	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	protein-coding
common_peak1-17382-94-116-0.259224848265911-0.790329511085542	chr7	126975907	126977399	+	0	NA	intron (NM_028129, intron 10 of 13)	PB1D10|SINE|Alu	38952	NM_001004187	434234	Mm.38237	NM_028129	ENSMUSG00000030924	2610020H08Rik	-	RIKEN cDNA 2610020H08 gene	protein-coding
common_peak2-22775-9-18--1.05831410703937-0.965105923112245	chr14	31670099	31670715	+	0	NA	intron (NM_028839, intron 1 of 7)	intron (NM_028839, intron 1 of 7)	-22036	NM_181390	66175	Mm.220895	NM_181390	ENSMUSG00000042485	Mustn1	1110028G01Rik|Mustang	musculoskeletal, embryonic nuclear protein 1	protein-coding
unique_peak1-2748-16-2-2.53330114154691-3.78760380288747	chr17	45776185	45776996	+	0	NA	exon (NM_001013767, exon 8 of 22)	exon (NM_001013767, exon 8 of 22)	19668	NM_001013767	268958	Mm.426026	NM_001013767	ENSMUSG00000058626	Capn11	-	calpain 11	protein-coding
unique_peak1-3596-11-4-1.18676548936425-1.68134727924692	chr19	32178809	32179358	+	0	NA	Intergenic	Intergenic	-1453	NM_018830	54447	Mm.491229	NM_018830	ENSMUSG00000024887	Asah2	AI585898	N-acylsphingosine amidohydrolase 2	protein-coding
common_peak1-8066-50-33-0.953477475228613-2.73597506297428	chr1	176812996	176814969	+	0	NA	intron (NM_011825, intron 1 of 1)	L1_Mus1|LINE|L1	37968	NM_011825	23893	Mm.25760	NM_011825	ENSMUSG00000050069	Grem2	Gremlin2|Prdc	gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis)	protein-coding
common_peak1-18636-32-46--0.275496832457978-0.426350872773373	chr8	111027084	111028327	+	0	NA	Intergenic	Intergenic	80872	NR_077224	109215	Mm.65282	NR_077224		3010033K07Rik	-	RIKEN cDNA 3010033K07 gene	ncRNA
common_peak2-26258-14-13-0.0918612383000403-0.332077462497413	chr2	30251684	30252475	+	0	NA	intron (NM_001290509, intron 5 of 6)	intron (NM_001290509, intron 5 of 6)	4305	NM_001290508	57170	Mm.285167	NM_020329	ENSMUSG00000026856	Dolpp1	0610011H20Rik|AB030189|LSFR2	dolichyl pyrophosphate phosphatase 1	protein-coding
unique_peak1-4269-8-5-0.420259917226415-1.10484139239135	chr2	132103405	132103912	+	0	NA	intron (NM_138651, intron 1 of 12)	intron (NM_138651, intron 1 of 12)	-8017	NM_001291039	110911	Mm.284503	NM_138651	ENSMUSG00000058793	Cds2	5730450N06Rik|5730460C18Rik|AI854580|D2Wsu127e	CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2	protein-coding
common_peak2-29749-7-6--0.00826409175941478-0.97990265578305	chr6	86486914	86487244	+	0	NA	intron (NR_037960, intron 3 of 4)	B2_Mm2|SINE|B2	9684	NR_037961	72012	Mm.349174	NR_037960	ENSMUSG00000097048	1600020E01Rik	-	RIKEN cDNA 1600020E01 gene	ncRNA
unique_peak1-6815-22-6-1.8399291830298-3.01815507148775	chr8	73133483	73134461	+	0	NA	Intergenic	Intergenic	-1759	NM_133772	76900	Mm.6667	NM_133772	ENSMUSG00000070003	Ssbp4	1210002E11Rik|AW743380|Sspb4	single stranded DNA binding protein 4	protein-coding
common_peak2-23691-36-29-0.572430490559236-1.05820747366651	chr15	86213784	86214876	+	0	NA	intron (NM_145476, intron 10 of 12)	B4|SINE|B4	169441	NM_145476	223754	Mm.28904	NM_145476	ENSMUSG00000051864	Tbc1d22a	BC023106|D15Ertd781e	TBC1 domain family, member 22a	protein-coding
common_peak2-21412-6-11--1.01956439034085-1.32595962126035	chr11	83788720	83789147	+	0	NA	intron (NM_194341, intron 2 of 19)	intron (NM_194341, intron 2 of 19)	11000	NM_194341	217030	Mm.82680	NM_194341	ENSMUSG00000034940	Synrg	Ap1gbp1|SYNG	synergin, gamma	protein-coding
unique_peak2-39676-7-20--1.59322659248057-1.71830443967823	chr9	108342701	108343702	+	0	NA	intron (NM_001004192, intron 2 of 3)	intron (NM_001004192, intron 2 of 3)	4388	NM_001004192	434439	Mm.78372	NM_001004192	ENSMUSG00000050641	BC048562	-	cDNA sequence BC048562	protein-coding
unique_peak2-37355-8-8--0.164702583494742-1.00793137938329	chr4	134496797	134497378	+	0	NA	Intergenic	(CAGAGA)n|Simple_repeat|Simple_repeat	10192	NM_026780	68592	Mm.29989	NM_026780	ENSMUSG00000028821	Syf2	1110018L13Rik|Cbpin|D4Bwg1551e|Gcipip|Ntc31|mp29|p29	SYF2 homolog, RNA splicing factor (S. cerevisiae)	protein-coding
unique_peak1-5604-26-11-1.34293659143731-2.2880788707084	chr6	89456442	89457541	+	0	NA	intron (NM_025351, intron 4 of 7)	RMER1A|Other|Other	88655	NM_025351	66098	Mm.20313	NM_025351	ENSMUSG00000030086	Chchd6	0710001P09Rik|1700021B03Rik	coiled-coil-helix-coiled-coil-helix domain containing 6	protein-coding
unique_peak2-35250-6-7--0.434601889619698-0.97990265578305	chr17	25165729	25166066	+	0	NA	exon (NM_134126, exon 6 of 30)	exon (NM_134126, exon 6 of 30)	12866	NM_134126	106633	Mm.32802	NM_134126	ENSMUSG00000024169	Ift140	AI661311|Tce5|Wdtc2|mKIAA0590	intraflagellar transport 140	protein-coding
unique_peak1-6670-10-5-0.771452844287613-1.33892459842472	chr8	18846253	18846726	+	0	NA	5' UTR (NM_026792, exon 1 of 8)	5' UTR (NM_026792, exon 1 of 8)	210	NM_026792	52123	Mm.24117	NM_026792		Agpat5	1110013A05Rik|D8Ertd319e	1-acylglycerol-3-phosphate O-acyltransferase 5 (lysophosphatidic acid acyltransferase, epsilon)	protein-coding
common_peak1-9452-126-150-0.399255460626747-1.79987553752339	chr11	103131835	103133201	+	0	NA	Intergenic	Intergenic	-3803	NM_016896	53859	Mm.158981	NM_016896	ENSMUSG00000020941	Map3k14	Nik|aly	mitogen-activated protein kinase kinase kinase 14	protein-coding
common_peak2-29552-23-9-1.39983940962172-2.17218792383888	chr6	41523385	41523946	+	0	NA	Intergenic	L1ME1|LINE|L1	-31816	NM_001146351	13848	Mm.271976	NM_007680	ENSMUSG00000029869	Ephb6	Cekl|Mep	Eph receptor B6	protein-coding
unique_peak2-34657-5-5--0.289342836727009-0.909929411522249	chr14	121368329	121368758	+	0	NA	Intergenic	B3|SINE|B2	58127	NM_023579	70572	Mm.221452	NM_023579	ENSMUSG00000030662	Ipo5	1110011C18Rik|5730478E03Rik|AA409333|C76941|IMB3|Kpnb3|Ranbp5	importin 5	protein-coding
common_peak1-12521-65-83-0.0998485166983665-0.362550921004498	chr18	38600214	38602319	+	0	NA	intron (NM_022996, intron 1 of 7)	intron (NM_022996, intron 1 of 7)	22637	NM_022996	65113	Mm.102496	NM_022996	ENSMUSG00000024425	Ndfip1	0610010M22Rik|N4wbp5	Nedd4 family interacting protein 1	protein-coding
unique_peak2-39875-6-12--1.13504160776079-1.45089835786865	chrX	74249697	74250326	+	0	NA	Intergenic	Intergenic	-401748	NM_001201395	74987	Mm.107996	NM_001201395	ENSMUSG00000079525	4930468A15Rik	-	RIKEN cDNA 4930468A15 gene	protein-coding
common_peak2-31170-26-44--0.563954004171213-0.879657821688435	chr8	46163094	46164085	+	0	NA	intron (NM_008639, intron 1 of 1)	B3|SINE|B2	9025	NM_008639	17773	Mm.5133	NM_008639	ENSMUSG00000054764	Mtnr1a	MR|MelR	melatonin receptor 1A	protein-coding
unique_peak1-1256-6-5--0.0195643903408542-0.947717972411649	chr11	116195374	116195829	+	0	NA	exon (NM_008240, exon 2 of 3)	exon (NM_008240, exon 2 of 3)	1067	NM_008240	15223	Mm.378938	NM_008240	ENSMUSG00000034227	Foxj1	FKHL-13|HFH-4|Hfh4	forkhead box J1	protein-coding
unique_peak1-5004-8-0-3.00522241794757-2.70926996097583	chr4	119278800	119279256	+	0	NA	intron (NM_001290696, intron 5 of 11)	intron (NM_001290696, intron 5 of 11)	-31309	NM_008190	14915	Mm.2614	NM_008190	ENSMUSG00000023247	Guca2a	Guca2	guanylate cyclase activator 2a (guanylin)	protein-coding
common_peak1-8192-9-20--1.20270401637454-1.23014042908325	chr10	117063269	117063817	+	0	NA	Intergenic	Lx5|LINE|L1	-3013	NM_027468	70574	Mm.339332	NM_027468	ENSMUSG00000020183	Cpm	1110060I01Rik|5730456K23Rik|AA589379|E030045M14Rik	carboxypeptidase M	protein-coding
common_peak1-14422-41-24-1.05729251507394-2.59472032287452	chr2	180218624	180220287	+	0	NA	Intergenic	Intergenic	-15226	NM_018766	18216	Mm.301712	NM_018766	ENSMUSG00000027568	Ntsr1	NT-1R|NTR-1|NTR1	neurotensin receptor 1	protein-coding
common_peak1-9498-16-32--0.926130477090392-1.31432283146954	chr11	110337144	110337816	+	0	NA	intron (NM_011943, intron 1 of 11)	intron (NM_011943, intron 1 of 11)	77044	NM_011943	26399	Mm.14487	NM_011943	ENSMUSG00000020623	Map2k6	MEK6|MKK6|Prkmk6|SAPKK3	mitogen-activated protein kinase kinase 6	protein-coding
common_peak2-31390-10-16--0.73104749624157-0.604422558181019	chr8	86922450	86923162	+	0	NA	Intergenic	MTB|LTR|MaLR	-16457	NM_001252060	12286	Mm.334658	NM_007578	ENSMUSG00000034656	Cacna1a	APCA|BI|Caca1a|Cacnl1a4|Cav2.1|Ccha1a|EA2|FHM|HPCA|MHP|MHP1|SCA6|alpha1A|la|nmf352|rkr|tg	calcium channel, voltage-dependent, P/Q type, alpha 1A subunit	protein-coding
common_peak2-20215-38-71--0.598472342143782-1.27243322704912	chr1	179802732	179803931	+	0	NA	Intergenic	RMER19B|LTR|ERVK	-76691	NM_007422	11566	Mm.338021	NM_007422	ENSMUSG00000015961	Adss	AI314886|AS|Adss2	adenylosuccinate synthetase, non muscle	protein-coding
unique_peak1-3447-9-3-1.18961340640422-1.57096726280955	chr19	7483356	7483811	+	0	NA	Intergenic	Intergenic	-8532	NM_175381	108899	Mm.386838	NM_175381	ENSMUSG00000053080	2700081O15Rik	AI255177|AI848741|AW742297	RIKEN cDNA 2700081O15 gene	protein-coding
common_peak1-17761-16-27--0.689091279789542-0.798885335210229	chr7	89739310	89740080	+	0	NA	intron (NM_001190374, intron 23 of 29)	intron (NM_001190374, intron 23 of 29)	57343	NM_177894	330577	Mm.222812	NM_177894	ENSMUSG00000038570	Fam154b	1700129I04Rik|D030069K18	family with sequence similarity 154, member B	protein-coding
common_peak2-20608-12-8-0.478850983645327-0.562038191119709	chr10	80033857	80034296	+	0	NA	intron (NM_078477, intron 1 of 1)	intron (NM_078477, intron 1 of 1)	5965	NM_078477	118445	Mm.41513	NM_078477	ENSMUSG00000035397	Klf16	AI843742|BTEB4|DRRF	Kruppel-like factor 16	protein-coding
common_peak2-30689-77-107-0.0296390773925292-0.310036389339139	chr7	110060779	110061670	+	0	NA	Intergenic	Intergenic	-2873	NM_147085	259089	Mm.377834	NM_147085	ENSMUSG00000043310	Olfr571	MOR21-1	olfactory receptor 571	protein-coding
unique_peak1-5996-7-0-2.79909083029819-2.40823996531185	chr6	100059777	100060269	+	0	NA	Intergenic	Intergenic	177329	NM_019743	56353	Mm.321633	NM_019743	ENSMUSG00000072872	Rybp	2410018J24Rik|DEDAF|YEAF1	RING1 and YY1 binding protein	protein-coding
common_peak1-11475-10-10--0.103016273628528-0.301029995663987	chr15	102023664	102024157	+	0	NA	Intergenic	Intergenic	-4436	NM_144942	246277	Mm.296382	NM_144942	ENSMUSG00000023044	Csad	Csd	cysteine sulfinic acid decarboxylase	protein-coding
common_peak2-28712-37-34-0.396710054540852-0.69337412621609	chr5	35574546	35575651	+	0	NA	Intergenic	LTR16D2|LTR|ERVL	-46117	NM_007418	11553	Mm.57205	NM_007418	ENSMUSG00000045318	Adra2c	Adra-2c|[a]2C|alpha2-C4|alpha2C	adrenergic receptor, alpha 2c	protein-coding
common_peak2-23073-13-8-0.608547029195456-0.660903317613904	chr14	73401918	73402400	+	0	NA	Intergenic	ORR1A4|LTR|MaLR	-23251	NR_027860	668489	Mm.158324	NR_027860		Gm9199	EG668489	glycine cleavage system protein H (aminomethyl carrier) pseudogene	pseudo
common_peak1-18007-12-8-0.478850983645327-0.562038191119709	chr7	141096502	141097221	+	0	NA	intron (NM_007400, intron 21 of 22)	intron (NM_007400, intron 21 of 22)	-122393	NM_001286031	101437	Mm.199223	NM_133941	ENSMUSG00000030986	Dhx32	3110079L04Rik|4732469F02Rik|AA408140|Ddx32	DEAH (Asp-Glu-Ala-His) box polypeptide 32	protein-coding
unique_peak2-38354-9-11--0.395349094316936-0.344532117358383	chr7	3292509	3293058	+	0	NA	promoter-TSS (NM_001093766)	promoter-TSS (NM_001093766)	-246	NM_001093766	50918	Mm.29874	NM_016969	ENSMUSG00000068566	Myadm	D7Wsu62e	myeloid-associated differentiation marker	protein-coding
unique_peak1-675-12-6-0.841421063030034-1.58711810488664	chr10	70131668	70132443	+	0	NA	Intergenic	Intergenic	-13344	NR_045292	319646	Mm.483039	NR_045291	ENSMUSG00000037747	D630013N20Rik	-	RIKEN cDNA D630013N20 gene	ncRNA
unique_peak1-5581-12-4-1.32684789020028-2.04196296489515	chr5	150180103	150180617	+	0	NA	Intergenic	Intergenic	-34021	NM_027519	70717	Mm.252139	NM_027519	ENSMUSG00000029659	Medag	6330406I15Rik|Awms3|MEDA-4|Meda4|mAWMS3	mesenteric estrogen dependent adipogenesis	protein-coding
common_peak2-21082-47-49-0.290985234991823-0.585862008351098	chr11	50324969	50326568	+	0	NA	Intergenic	Intergenic	-81155	NM_172557	216724	Mm.390400	NM_172557	ENSMUSG00000020375	Rufy1	3000002E04Rik|Rabip4|ZFYVE12	RUN and FYVE domain containing 1	protein-coding
common_peak1-16237-31-44--0.266614425516551-0.432554671146866	chr5	103736841	103737771	+	0	NA	Intergenic	Intergenic	-9258	NR_040699	74624	Mm.389662	NR_040699		4930429D17Rik	-	RIKEN cDNA 4930429D17 gene	ncRNA
common_peak2-26844-69-131--0.449251672099721-1.40612184567901	chr2	153741137	153742470	+	0	NA	Intergenic	Intergenic	-2163	NM_194357	378700	Mm.55392	NM_194357	ENSMUSG00000068008	Bpifb3	Lplunc3|Rya3	BPI fold containing family B, member 3	protein-coding
common_peak1-17327-18-12-0.612479433087259-0.739965416525508	chr6	146633870	146634717	+	0	NA	Intergenic	Intergenic	28553	NR_046277	74925	Mm.386304	NR_046277	ENSMUSG00000085238	4930479D17Rik	-	RIKEN cDNA 4930479D17 gene	ncRNA
common_peak1-8909-36-40-0.121769081549671-0.36493371439645	chr11	50377713	50378602	+	0	NA	Intergenic	LTR78|LTR|ERV1	-37430	NM_001277305	216725	Mm.110597	NM_175643	ENSMUSG00000036545	Adamts2	ADAM-TS2|ADAMTS-2|ADAMTS-3|PCINP|hPCPNI|mKIAA4060|pNPI	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 2	protein-coding
common_peak2-23330-12-19--0.673152109799724-0.546772548767014	chr15	37317476	37318314	+	0	NA	intron (NM_001170866, intron 5 of 6)	B1_Mus1|SINE|Alu	-37414	NM_029113	74892	Mm.107630	NM_029113	ENSMUSG00000022288	4930447A16Rik	-	RIKEN cDNA 4930447A16 gene	protein-coding
common_peak1-14156-17-10-0.75886471956774-0.917676348953458	chr2	132923672	132924467	+	0	NA	Intergenic	ORR1E|LTR|MaLR	-152297	NM_198029	241639	Mm.209784	NM_198029	ENSMUSG00000027356	Fermt1	5830467P10Rik|Kindlin-1	fermitin family homolog 1 (Drosophila)	protein-coding
common_peak1-17319-30-21-0.710243790854576-1.16836819221353	chr6	145339929	145340947	+	0	NA	non-coding (NR_003625, exon 1 of 1)	non-coding (NR_003625, exon 1 of 1)	4293	NR_003625	381827	Mm.179075	NM_001001987		1700073E17Rik	-	ribosomal protein L7 pseudogene	pseudo
common_peak1-15611-6-9--0.75652998450706-1.11707584880836	chr4	132639159	132639616	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-47161	NM_153423	242687	Mm.23566	NM_153423	ENSMUSG00000028868	Wasf2	AW742646|D4Ertd13e|WAVE2	WAS protein family, member 2	protein-coding
unique_peak2-35878-6-5--0.0195643903408542-0.947717972411649	chr18	82571269	82571552	+	0	NA	intron (NM_008082, intron 1 of 2)	intron (NM_008082, intron 1 of 2)	4759	NM_008082	14427	Mm.6219	NM_008082	ENSMUSG00000024553	Galr1	Galnr1	galanin receptor 1	protein-coding
unique_peak2-39912-3-9--1.73591118484664-1.57096726280955	chrX	99470195	99470778	+	0	NA	Intergenic	L1VL2|LINE|L1	22496	NR_040285	434825	Mm.447373	NR_040285	ENSMUSG00000085568	Gm14858	OTTMUSG00000018301	predicted gene 14858	ncRNA
unique_peak1-3994-10-4-1.03448725012141-1.5150158574804	chr2	35230668	35231154	+	0	NA	TTS (NM_001080709)	TTS (NM_001080709)	-7662	NM_029463	75859	Mm.159604	NM_029463	ENSMUSG00000026882	4930568D16Rik	Ggta1l1	RIKEN cDNA 4930568D16 gene	protein-coding
common_peak1-15078-13-12-0.0780323124966764-0.334470287753051	chr3	126922690	126923241	+	0	NA	Intergenic	Intergenic	58742	NR_105029	100862268	Mm.444603	NR_105029	ENSMUSG00000097456	LOC100862268	-	uncharacterized LOC100862268	ncRNA
common_peak2-30379-76-122--0.180570119475958-0.459979256805583	chr7	29247496	29249388	+	0	NA	intron (NM_001141921, intron 4 of 4)	B1_Mur4|SINE|Alu	11185	NM_001141921	80749	Mm.483073	NM_030562		Lrfn1	BC004018|SALM2|Semo1	leucine rich repeat and fibronectin type III domain containing 1	protein-coding
unique_peak1-2858-10-5-0.771452844287613-1.33892459842472	chr17	32919568	32920089	+	0	NA	intron (NM_172458, intron 1 of 3)	B3|SINE|B2	5404	NM_172458	208292	Mm.38813	NM_172458		Zfp871	4732483N19|9030612M13Rik|AI118577|AI265322|mKIAA3006	zinc finger protein 871	protein-coding
common_peak2-29932-42-24-1.09847313809246-2.87232347911589	chr6	115528333	115529347	+	0	NA	TTS (NM_199033)	TTS (NM_199033)	13754	NM_001101431	70291	Mm.133694	NM_001101431		Mkrn2os	2510049J12Rik	makorin, ring finger protein 2, opposite strand	protein-coding
common_peak1-10637-12-6-0.841421063030034-1.58711810488664	chr14	46277170	46277727	+	0	NA	TTS (NR_039593)	TTS (NR_039593)	280	NR_039593	100628600		NR_039593		Mir5131	mmu-mir-5131|mu-mir-5131	microRNA 5131	ncRNA
common_peak2-24319-26-37--0.320028421285123-0.460129356264038	chr17	63863941	63864839	+	0	NA	Intergenic	Intergenic	-14461	NM_015794	50758	Mm.136366	NM_015794		Fbxl17	6330576B01Rik|AI452053|BB073797|C130023C01Rik|Fbx13|Fbxo13	F-box and leucine-rich repeat protein 17	protein-coding
common_peak1-15064-8-10--0.454209200689727-1.078512453669	chr3	123677141	123677660	+	0	NA	Intergenic	Intergenic	-283630	NR_121616	83398	Mm.443908	NM_031186	ENSMUSG00000027977	Ndst3	4921531K01Rik|4930511P15Rik|N-HSST 3|NDST-3	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	protein-coding
common_peak1-12058-11-20--0.883623838527147-0.876666802405043	chr17	23563785	23564339	+	0	NA	Intergenic	L1Md_F2|LINE|L1	42292	NM_001104580	619697	Mm.469848	NM_001104580	ENSMUSG00000090966	Vmn2r116	EG619697|V2Rp5	vomeronasal 2, receptor 116	protein-coding
common_peak1-16476-20-54--1.29328492893347-3.32003866131528	chr5	137425835	137426753	+	0	NA	Intergenic	Intergenic	-2851	NM_001163243	66437	Mm.25849	NM_025562	ENSMUSG00000019054	Fis1	2010003O14Rik|Ttc11	fission 1 (mitochondrial outer membrane) homolog (yeast)	protein-coding
unique_peak1-4605-8-1-2.00522241794757-2.05605744720049	chr3	65586319	65586825	+	0	NA	intron (NM_001166659, intron 8 of 12)	MTEb-int|LTR|MaLR	116422	NM_001166659	624866	Mm.296317	NM_001037923	ENSMUSG00000074579	Lekr1	EG546798|EG624866|Gm6534	leucine, glutamate and lysine rich 1	protein-coding
common_peak1-14646-40-21-1.1995440641138-3.09993411082635	chr3	57320189	57321415	+	0	NA	intron (NM_133784, intron 2 of 6)	intron (NM_133784, intron 2 of 6)	58996	NM_133784	97064	Mm.405029	NM_133784	ENSMUSG00000027803	Wwtr1	2310058J06Rik|2610021I22Rik|C78399|Taz	WW domain containing transcription regulator 1	protein-coding
common_peak2-22929-28-57--0.805021875306109-1.70773054518537	chr14	46882568	46883734	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-116048	NR_037981	100041724	Mm.383311	NM_001099324	ENSMUSG00000079261	Gm15217	OTTMUSG00000019524	predicted gene 15217	ncRNA
common_peak1-9097-23-26--0.0331199976543877-0.301029995663988	chr11	70451643	70452441	+	0	NA	promoter-TSS (NM_010326)	promoter-TSS (NM_010326)	-582	NM_010326	14723	Mm.377085	NM_010326	ENSMUSG00000050675	Gp1ba	GPIba|GPIbalpha	glycoprotein 1b, alpha polypeptide	protein-coding
unique_peak2-38356-5-10--1.16381195464315-1.33892459842472	chr7	3665099	3665504	+	0	NA	intron (NM_011095, intron 13 of 14)	intron (NM_011095, intron 13 of 14)	6683	NM_011095	18733	Mm.326531	NM_011095		Pirb	Gp91|LIR-3|Lilrb3|PIR-B	paired Ig-like receptor B	protein-coding
unique_peak1-3384-12-1-2.64877598508764-3.36932189928148	chr19	3840460	3841170	+	0	NA	Intergenic	Intergenic	-10958	NM_001271496	12660	Mm.225505	NM_013490	ENSMUSG00000024843	Chka	CK|CK/EK-alpha|Chetk-alpha|Chk|ChoK|EK|EtnK-alpha	choline kinase alpha	protein-coding
common_peak1-8232-37-38-0.24059085262357-0.466726531031556	chr10	12922204	12923620	+	0	NA	Intergenic	Intergenic	-9969	NM_181470	353258	Mm.117581	NM_181470	ENSMUSG00000019814	Ltv1	2610020N02Rik	LTV1 homolog (S. cerevisiae)	protein-coding
common_peak2-31492-19-21--0.0567442919756109-0.301029995663971	chr8	106640610	106641256	+	0	NA	intron (NM_009868, intron 2 of 11)	Lx6|LINE|L1	15408	NM_009868	12562	Mm.21767	NM_009868	ENSMUSG00000031871	Cdh5	7B4|AA408225|Cd144|VE-Cad|VECD|VEcad|Vec	cadherin 5	protein-coding
common_peak1-14872-13-19--0.543456064249594-0.466170754204149	chr3	95687277	95687991	+	0	NA	intron (NR_040446, intron 1 of 3)	intron (NR_040446, intron 1 of 3)	-1483	NM_001033302	229599	Mm.331218	NM_001033302	ENSMUSG00000038550	Ciart	Chrono|Gm129	circadian associated repressor of transcription	protein-coding
common_peak2-27436-13-14--0.12841856497075-0.301029995663977	chr3	89860983	89861569	+	0	NA	intron (NM_001287087, intron 6 of 8)	B3|SINE|B2	4552	NM_027500	99650	Mm.300083	NM_025762	ENSMUSG00000027942	4933434E20Rik	5730552F22Rik|AI462154|NICE-3|NS5ATP4	RIKEN cDNA 4933434E20 gene	protein-coding
common_peak2-22182-15-16--0.075298090694683-0.301029995663976	chr12	103425237	103425814	+	0	NA	intron (NM_172152, intron 2 of 16)	intron (NM_172152, intron 2 of 16)	57896	NM_172152	238384	Mm.312448	NM_172152	ENSMUSG00000041771	Slc24a4	A930002M03Rik|AW492432|NCKX4	solute carrier family 24 (sodium/potassium/calcium exchanger), member 4	protein-coding
unique_peak2-37195-7-15--1.20090916970181-0.947446088118041	chr4	59035124	59035751	+	0	NA	exon (NM_001033165, exon 4 of 4)	exon (NM_001033165, exon 4 of 4)	-12591	NM_025277	14700	Mm.41780	NM_025277	ENSMUSG00000038607	Gng10	AV006524	guanine nucleotide binding protein (G protein), gamma 10	protein-coding
common_peak2-30724-43-46-0.227974333846065-0.475408985215012	chr7	114171052	114171953	+	0	NA	Intergenic	Lx3C|LINE|L1	-8148	NM_147034	259036	Mm.377801	NM_147034	ENSMUSG00000073898	Olfr713	MOR263-1|P3	olfactory receptor 713	protein-coding
common_peak1-9426-31-16-1.13777582956278-2.15838218998676	chr11	101619811	101621107	+	0	NA	intron (NM_144831, intron 18 of 22)	intron (NM_144831, intron 18 of 22)	26165	NM_008815	18612	Mm.5025	NM_008815	ENSMUSG00000017724	Etv4	AW414408|Pea-3|Pea3	ets variant 4	protein-coding
common_peak2-21317-13-16--0.30899081061257-0.330004445983672	chr11	75403079	75403705	+	0	NA	intron (NM_008850, intron 1 of 10)	intron (NM_008850, intron 1 of 10)	1782	NM_008850	18738	Mm.3128	NM_008850	ENSMUSG00000017781	Pitpna	Pitpn|vb|vibrator	phosphatidylinositol transfer protein, alpha	protein-coding
common_peak2-27646-26-35--0.24202590928385-0.384630725886657	chr3	107759616	107760454	+	0	NA	Intergenic	Intergenic	12057	NM_010359	14864	Mm.440885	NM_010359	ENSMUSG00000004038	Gstm3	Fsc2|mGSTM5	glutathione S-transferase, mu 3	protein-coding
unique_peak1-4394-13-6-0.971117108580164-1.01572999746118	chr2	164879986	164880551	+	0	NA	promoter-TSS (NR_027852)	promoter-TSS (NR_027852)	-868	NM_170704	21939	Mm.271833	NM_011611	ENSMUSG00000017652	Cd40	AI326936|Bp50|GP39|HIGM1|IGM|IMD3|T-BAM|TRAP|Tnfrsf5|p50	CD40 antigen	protein-coding
common_peak2-26041-109-153-0.1193731411923-0.434075142507129	chr2	4881209	4882667	+	0	NA	Intergenic	Intergenic	-15230	NM_001113558	68527	Mm.27791	NM_026754	ENSMUSG00000026668	Ucma	1110017I16Rik|AW121955|Grp	upper zone of growth plate and cartilage matrix associated	protein-coding
common_peak1-18817-15-16--0.075298090694683-0.301029995663976	chr9	3403988	3404696	+	0	NA	intron (NM_027545, intron 1 of 17)	intron (NM_027545, intron 1 of 17)	257	NM_027545	244672	Mm.245482	NM_027545	ENSMUSG00000025898	Cwf19l2	3230401L03Rik|9030209E10	CWF19-like 2, cell cycle control (S. pombe)	protein-coding
unique_peak2-38469-4-7--1.02346051385325-1.09384600808989	chr7	29234054	29234438	+	0	NA	Intergenic	MIR|SINE|MIR	-2758	NM_030562	80749	Mm.483073	NM_030562		Lrfn1	BC004018|SALM2|Semo1	leucine rich repeat and fibronectin type III domain containing 1	protein-coding
common_peak1-18948-12-19--0.673152109799724-0.546772548767014	chr9	50528332	50528886	+	0	NA	intron (NM_178118, intron 1 of 19)	intron (NM_178118, intron 1 of 19)	7480	NM_178118	330938	Mm.82598	NM_178118	ENSMUSG00000032064	Dixdc1	4930563F16Rik|BC048182|Ccd1|Ccd1Aalpha1L|Ccd1Abeta1L|Ccd1BalphaL|Ccd1BbetaL|Ccd1CL|mKIAA1735	DIX domain containing 1	protein-coding
common_peak1-13092-16-8-0.948338640825749-1.02063122982878	chr19	7240396	7241095	+	0	NA	intron (NM_134147, intron 3 of 10)	intron (NM_134147, intron 3 of 10)	40029	NM_134150	107260	Mm.203921	NM_134150	ENSMUSG00000024767	Otub1	AI850305	OTU domain, ubiquitin aldehyde binding 1	protein-coding
common_peak1-11873-59-70-0.175616881367896-0.445902247262471	chr16	94316541	94318504	+	0	NA	intron (NM_011377, intron 7 of 10)	intron (NM_011377, intron 7 of 10)	191941	NM_139145	110948	Mm.30921	NM_139145	ENSMUSG00000040820	Hlcs	410I21.SP6|D16Jhu34	holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase)	protein-coding
unique_peak2-37435-5-7--0.704380336005853-1.01466476204226	chr4	152010139	152010620	+	0	NA	Intergenic	Intergenic	-61270	NR_033138	330004	Mm.291863	NM_001033414		Gm833	-	predicted gene 833	ncRNA
common_peak2-30124-58-41-0.903632512111736-2.95955828708081	chr6	137558035	137559716	+	0	NA	intron (NM_007945, intron 1 of 21)	MTEb|LTR|MaLR	38931	NM_001271588	13860	Mm.235346	NM_007945	ENSMUSG00000015766	Eps8	AW261790	epidermal growth factor receptor pathway substrate 8	protein-coding
common_peak1-14937-9-12--0.510826311736872-0.394412252720706	chr3	102742893	102743369	+	0	NA	TTS (NM_201622)	TTS (NM_201622)	-3108	NM_011516	20957	Mm.243849	NM_011516	ENSMUSG00000027855	Sycp1	SCP1	synaptonemal complex protein 1	protein-coding
common_peak1-9347-9-6-0.382258484346616-1.11707584880836	chr11	96943506	96944035	+	0	NA	Intergenic	Intergenic	18688	NR_106181	102465893		NR_106181		Mir8103	mmu-mir-8103	microRNA mir-8103	ncRNA
unique_peak2-35241-5-5--0.289342836727009-0.909929411522249	chr16	95729219	95729508	+	0	NA	intron (NM_133659, intron 2 of 10)	intron (NM_133659, intron 2 of 10)	22609	NM_133659	13876	Mm.164531	NM_133659	ENSMUSG00000040732	Erg	D030036I24Rik	avian erythroblastosis virus E-26 (v-ets) oncogene related	protein-coding
unique_peak1-1404-9-3-1.18961340640422-1.57096726280955	chr12	73780587	73781054	+	0	NA	Intergenic	B3|SINE|B2	-15005	NM_025522	66375	Mm.289653	NM_025522	ENSMUSG00000021094	Dhrs7	2310016E22Rik|5730564L20Rik|AW061210|Retdsr4|Retsdr4	dehydrogenase/reductase (SDR family) member 7	protein-coding
unique_peak1-7159-9-4-0.867685311516858-1.36011389749466	chr9	58275643	58276129	+	0	NA	Intergenic	B4|SINE|B4	-27094	NR_040736	74879	Mm.416924	NR_040736	ENSMUSG00000097651	4930461G14Rik	-	RIKEN cDNA 4930461G14 gene	ncRNA
common_peak2-21399-7-14--1.10779976531033-0.817533494790411	chr11	80817743	80818365	+	0	NA	intron (NM_001034013, intron 1 of 9)	L1_Mus1|LINE|L1	146163	NM_029367	75622	Mm.26988	NM_029367	ENSMUSG00000053184	Spaca3	1700025M08Rik|ALLP17|Lyc3|SLLP1|mSLLP1	sperm acrosome associated 3	protein-coding
unique_peak2-38067-5-7--0.704380336005853-1.01466476204226	chr6	47953311	47953906	+	0	NA	Intergenic	RLTR6-int|LTR|ERV1	44505	NM_001081382	72306	Mm.381553	NM_001081382	ENSMUSG00000071477	Zfp777	2500002G23Rik	zinc finger protein 777	protein-coding
unique_peak2-32459-2-5--1.50241675698448-1.08602067057793	chr1	13371938	13372361	+	0	NA	Intergenic	B4A|SINE|B4	-7985	NM_008678	17978	Mm.2537	NM_008678	ENSMUSG00000005886	Ncoa2	9530095N19|D1Ertd433e|GRIP-1|Grip1|KAT13C|SRC-2|TIF-2|TIF2|bHLHe75	nuclear receptor coactivator 2	protein-coding
common_peak1-10895-305-521-0.148784914377424-0.965413789233583	chr15	96284677	96289216	+	0	NA	intron (NM_028148, intron 1 of 14)	intron (NM_028148, intron 1 of 14)	4328	NM_028148	72193	Mm.324474	NM_028148	ENSMUSG00000033228	Scaf11	1110061H03Rik|2610510E10Rik|AI462454|CASP11|SIP1|SRRP129|Sfrs2ip|Srsf2ip|mKIAA3013	SR-related CTD-associated factor 11	protein-coding
unique_peak2-38546-2-6--1.72480917832092-1.26211192963361	chr7	51892212	51892613	+	0	NA	intron (NM_001271538, intron 14 of 40)	MER2|DNA|MER2_type	28461	NM_001271538	71960	Mm.158289	NM_028021	ENSMUSG00000030739	Myh14	2400004E04Rik|II-C|NHMCII|NMHC II-C	myosin, heavy polypeptide 14	protein-coding
unique_peak2-32579-6-10--0.894033508256995-1.21398586181642	chr1	88438060	88438705	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	15071	NM_008972	19231	Mm.19187	NM_008972	ENSMUSG00000026238	Ptma	Thym	prothymosin alpha	protein-coding
common_peak2-30185-15-16--0.075298090694683-0.301029995663976	chr7	19333010	19333609	+	0	NA	Intergenic	MMETn-int|LTR|ERVK	29870	NM_001004152	243862	Mm.389833	NM_001004152	ENSMUSG00000044903	Psg22	AA408604|cea9	pregnancy-specific glycoprotein 22	protein-coding
common_peak1-19465-32-40--0.0784599853984238-0.303778768325576	chrX	112311269	112312166	+	0	NA	Intergenic	L1_Mus3|LINE|L1	290526	NM_001081661	75097	Mm.50414	NM_001081661	ENSMUSG00000047079	Ube2dnl2	4930524E20Rik	ubiquitin-conjugating enzyme E2D N-terminal like 2	protein-coding
common_peak1-16120-79-122--0.11367933816262-0.359928666095459	chr5	66150296	66152136	+	0	NA	Intergenic	RLTR20B2|LTR|ERVK	-3544	NM_001024917	333789	Mm.332398	NM_001024917	ENSMUSG00000037795	N4bp2	B3bp|E430014I16|Gm1791|Gm868	NEDD4 binding protein 2	protein-coding
unique_peak1-5728-21-5-1.98452676454508-3.24127775360835	chr6	43292823	43293825	+	0	NA	Intergenic	Intergenic	-33771	NM_130869	18291	Mm.17715	NM_130869	ENSMUSG00000029736	Nobox	OG2|Og2x	NOBOX oogenesis homeobox	protein-coding
unique_peak2-35397-2-5--1.50241675698448-1.08602067057793	chr17	31995782	31996172	+	0	NA	Intergenic	Intergenic	-3240	NM_010831	17691	Mm.290941	NM_010831	ENSMUSG00000024042	Sik1	Msk|Sik|Snf1lk	salt inducible kinase 1	protein-coding
common_peak1-10461-18-11-0.727956650507195-0.876666802405043	chr13	109318755	109319667	+	0	NA	Intergenic	Intergenic	-125160	NM_011056	238871	Mm.434429	NM_011056		Pde4d	9630011N22Rik|Dpde3	phosphodiesterase 4D, cAMP specific	protein-coding
unique_peak2-33233-1-20--4.0193744329955-4.8766546284749	chr10	120898491	120899173	+	0	NA	intron (NM_138956, intron 1 of 4)	intron (NM_138956, intron 1 of 4)	14474	NM_138956	192678	Mm.41265	NM_138956	ENSMUSG00000025795	Rassf3	AW212023|AW322379	Ras association (RalGDS/AF-6) domain family member 3	protein-coding
common_peak2-19713-18-11-0.727956650507195-0.876666802405043	chr1	64808631	64809305	+	0	NA	Intergenic	Intergenic	-24644	NM_022721	14367	Mm.150813	NM_022721	ENSMUSG00000045005	Fzd5	5330434N09Rik|AI427138|Fz-5|Fz5|mFz5	frizzled homolog 5 (Drosophila)	protein-coding
unique_peak2-32502-2-10--2.37688587490062-2.09384600808989	chr1	50481108	50481460	+	0	NA	Intergenic	L1M2|LINE|L1	-503083	NM_019790	56363	Mm.245154	NM_019790	ENSMUSG00000026109	Tmeff2	4832418D20Rik|7630402F16Rik|TR-2	transmembrane protein with EGF-like and two follistatin-like domains 2	protein-coding
unique_peak2-39570-9-9--0.132314688483142-1.03275496310833	chr9	72644130	72644660	+	0	NA	Intergenic	Intergenic	-10686	NM_175485	235472	Mm.31696	NM_175485	ENSMUSG00000036030	Prtg	A230098A12Rik|Igdcc5	protogenin homolog (Gallus gallus)	protein-coding
unique_peak2-38921-5-5--0.289342836727009-0.909929411522249	chr8	18936347	18936640	+	0	NA	intron (NM_001113350, intron 6 of 6)	intron (NM_001113350, intron 6 of 6)	14378	NM_001286469	319581	Mm.111354	NM_176951	ENSMUSG00000039814	Xkr5	5430438H03Rik|XRG5	X Kell blood group precursor-related family, member 5	protein-coding
common_peak2-20204-34-20-0.989751104222505-2.03367508793052	chr1	177718760	177719971	+	0	NA	intron (NM_029453, intron 16 of 27)	intron (NM_029453, intron 16 of 27)	90641	NM_029453	75820	Mm.50361	NM_029453	ENSMUSG00000026523	Wdr64	4930415O10Rik|4930511H01Rik	WD repeat domain 64	protein-coding
unique_peak2-39564-3-9--1.73591118484664-1.57096726280955	chr9	70889352	70889740	+	0	NA	Intergenic	Intergenic	-106931	NM_008280	15450	Mm.390187	NM_008280	ENSMUSG00000032207	Lipc	AI256194|HL|Hpl	lipase, hepatic	protein-coding
unique_peak1-3252-10-2-1.77145284428761-2.09384600808989	chr18	65062303	65062620	+	0	NA	intron (NM_001114386, intron 1 of 30)	ORR1A2|LTR|MaLR	15051	NM_001114386	83814	Mm.98668	NM_031881	ENSMUSG00000024589	Nedd4l	1300012C07Rik|Nedd4-2|Nedd4b	neural precursor cell expressed, developmentally down-regulated gene 4-like	protein-coding
common_peak1-17172-15-12-0.311725032414564-0.425539671739611	chr6	120822245	120822792	+	0	NA	intron (NM_153516, intron 5 of 6)	L1Md_F2|LINE|L1	36270	NM_153516	94044	Mm.27990	NM_153516	ENSMUSG00000009112	Bcl2l13	BCL-RAMBO|E430016C20Rik|Mil-1|Mil1	BCL2-like 13 (apoptosis facilitator)	protein-coding
unique_peak1-4014-7-1-1.79909083029819-1.80617997398389	chr2	38438717	38439134	+	0	NA	intron (NM_001159631, intron 9 of 9)	intron (NM_001159631, intron 9 of 9)	60501	NM_011187	19177	Mm.389251	NM_011187	ENSMUSG00000026750	Psmb7	AU020723|MC14	proteasome (prosome, macropain) subunit, beta type 7	protein-coding
common_peak1-8172-19-24--0.241168863113038-0.344491671143527	chr10	59899862	59900690	+	0	NA	intron (NR_045556, intron 15 of 68)	intron (NR_045556, intron 15 of 68)	37802	NM_001164374	100302688	Mm.444135	NM_001164374	ENSMUSG00000090439	Gm17455	-	predicted gene, 17455	protein-coding
unique_peak2-37220-4-17--2.19338551529556-2.18192634393779	chr4	88757101	88757608	+	0	NA	Intergenic	MLT1D|LTR|MaLR	-25920	NM_024433	66902	Mm.28500	NM_024433	ENSMUSG00000062937	Mtap	1300019I21Rik|MSAP	methylthioadenosine phosphorylase	protein-coding
common_peak1-14457-191-232-0.496803120627201-3.96135531868114	chr3	30503811	30509567	+	0	NA	exon (NM_001289621, exon 3 of 7)	exon (NM_001289621, exon 3 of 7)	5680	NM_001289621	80732	Mm.200378	NM_030557	ENSMUSG00000037730	Mynn	2810011C24Rik|AA415053|AI661031|AW049392|Mynr|SBBIZ1	myoneurin	protein-coding
unique_peak2-39098-3-8--1.58390809140159-1.39487600375387	chr8	77610239	77610724	+	0	NA	Intergenic	Intergenic	-7036	NM_010442	15368	Mm.276389	NM_010442	ENSMUSG00000005413	Hmox1	D8Wsu38e|HO-1|HO1|Hemox|Hmox|Hsp32	heme oxygenase (decycling) 1	protein-coding
common_peak2-21843-30-36--0.039777956137077-0.301029995663973	chr11	120824682	120825419	+	0	NA	3' UTR (NM_139059, exon 9 of 9)	3' UTR (NM_139059, exon 9 of 9)	14669	NM_001038654	80879	Mm.28632	NM_030696	ENSMUSG00000025161	Slc16a3	Mct3|Mct4	solute carrier family 16 (monocarboxylic acid transporters), member 3	protein-coding
common_peak1-11581-29-26-0.357402578451643-0.590428395010953	chr16	14360908	14362063	+	0	NA	promoter-TSS (NM_008576)	promoter-TSS (NM_008576)	-166	NM_008576	17250	Mm.196634	NM_008576	ENSMUSG00000023088	Abcc1	Abcc1a|Abcc1b|MRP|Mdrap|Mrp1	ATP-binding cassette, sub-family C (CFTR/MRP), member 1	protein-coding
common_peak2-23193-70-65-0.575572797016945-1.76186337069789	chr15	80132913	80134557	+	0	NA	intron (NM_001044308, intron 2 of 36)	intron (NM_001044308, intron 2 of 36)	16067	NM_001044308	239556	Mm.291058	NM_001044308	ENSMUSG00000022416	Cacna1i	Ca(V)3.3	calcium channel, voltage-dependent, alpha 1I subunit	protein-coding
common_peak2-28251-4-7--1.02346051385325-1.09384600808989	chr4	125122821	125123254	+	0	NA	Intergenic	Intergenic	-45038	NM_001081097	14807	Mm.40896	NM_001081097	ENSMUSG00000001985	Grik3	9630027E11|GluK3|GluR7-3|Glur-7|Glur7	glutamate receptor, ionotropic, kainate 3	protein-coding
common_peak2-22099-5-5--0.289342836727009-0.909929411522249	chr12	80211437	80211855	+	0	NA	Intergenic	PB1D7|SINE|Alu	-6720	NR_110486	321017	Mm.311575	NR_110486		9230116L04Rik	-	RIKEN cDNA 9230116L04 gene	ncRNA
common_peak1-15844-19-12-0.702247608520594-0.840839978588874	chr5	3289643	3290503	+	0	NA	Intergenic	Intergenic	-54239	NM_009873	12571	Mm.31672	NM_009873	ENSMUSG00000040274	Cdk6	5830411I20|AI504062|Crk2	cyclin-dependent kinase 6	protein-coding
unique_peak1-1784-9-4-0.867685311516858-1.36011389749466	chr14	8258153	8258727	+	0	NA	Intergenic	IAPEY3-int|LTR|ERVK	13453	NR_015568	68308	Mm.390669	NR_015568	ENSMUSG00000090585	4933406F09Rik	1700007H14Rik|4930429F21Rik|4930570O04Rik|Gm3768	RIKEN cDNA 4933406F09 gene	ncRNA
common_peak1-8151-18-16-0.225456309978012-0.397739447719379	chr1	191454617	191455397	+	0	NA	Intergenic	Intergenic	56958	NM_001081363	108000	Mm.129746	NM_001081363	ENSMUSG00000026605	Cenpf	6530404A22Rik|AI325968|CENF|Lek1|PRO1779|mitosin	centromere protein F	protein-coding
unique_peak2-33278-1-9--2.94898510510411-2.31132995230379	chr11	106036889	106037360	+	0	NA	intron (NM_028126, intron 2 of 10)	B1_Mur2|SINE|Alu	-15668	NM_172397	67803	Mm.21687	NM_172397	ENSMUSG00000040699	Limd2	0610025L06Rik|AI413966	LIM domain containing 2	protein-coding
common_peak1-13608-17-14-0.311405742596519-0.466170754204149	chr2	20525991	20526811	+	0	NA	intron (NM_001081006, intron 3 of 21)	L1Md_F2|LINE|L1	85261	NM_001177631	208618	Mm.237935	NM_029895	ENSMUSG00000036617	Etl4	6620402G01Rik|9430077C05Rik|BC026657|E330027G05Rik|Etl-4|Skt	enhancer trap locus 4	protein-coding
common_peak2-25451-18-8-1.14299414978604-1.45476480588849	chr19	4148579	4149050	+	0	NA	intron (NM_011778, intron 1 of 10)	CpG	151	NM_011778	23789	Mm.276859	NM_011778	ENSMUSG00000024835	Coro1b	-	coronin, actin binding protein 1B	protein-coding
common_peak1-17591-11-14--0.398197011356905-0.379391706698377	chr7	43579769	43580444	+	0	NA	Intergenic	Intergenic	2939798	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak2-24654-6-7--0.434601889619698-0.97990265578305	chr17	35770438	35770879	+	0	NA	Intergenic	RMER17C|LTR|ERVK	-7076	NM_001244654	672682	Mm.454025	NM_001244654	ENSMUSG00000090588	Gm9573	Muc21	predicted gene 9573	protein-coding
common_peak1-16647-22-13-0.8399291830298-1.1381569562463	chr6	91012713	91013780	+	0	NA	intron (NM_018815, intron 14 of 39)	B1_Mur1|SINE|Alu	53574	NM_018815	54563	Mm.28162	NM_018815	ENSMUSG00000030091	Nup210	9830001L10|AI836801|Pom210|gp190|gp210	nucleoporin 210	protein-coding
common_peak2-27456-14-25--0.801223557783447-0.84969927174089	chr3	90490350	90491169	+	0	NA	Intergenic	Intergenic	8884	NM_001281852	20202	Mm.2128	NM_009114	ENSMUSG00000056071	S100a9	60B8Ag|AW546964|BEE22|Cagb|GAGB|L1Ag|MRP14|p14	S100 calcium binding protein A9 (calgranulin B)	protein-coding
unique_peak1-3853-13-4-1.45654393575041-2.23384849113406	chr2	6080911	6081399	+	0	NA	Intergenic	Intergenic	27226	NR_033471	100038358	Mm.353975	NR_033470		Gm10857	AU015850|ENSMUSG00000075545	predicted gene 10857	ncRNA
common_peak1-15430-10-9-0.0344872501214071-1.05503135781948	chr4	89048124	89048598	+	0	NA	Intergenic	Intergenic	-91420	NM_007670	12579	Mm.423094	NM_007670	ENSMUSG00000073802	Cdkn2b	AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b	cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)	protein-coding
common_peak1-10572-31-22-0.70167671475611-1.13829382151971	chr14	24490490	24491521	+	0	NA	intron (NM_001253374, intron 1 of 28)	intron (NM_001253374, intron 1 of 28)	332422	NM_001253375	16531	Mm.343607	NM_010610	ENSMUSG00000063142	Kcnma1	5730414M22Rik|BKCa|MaxiK|Slo|Slo1|mSlo|mSlo1	potassium large conductance calcium-activated channel, subfamily M, alpha member 1	protein-coding
common_peak2-26854-10-10--0.103016273628528-0.301029995663987	chr2	155073820	155074406	+	0	NA	intron (NM_001291108, intron 3 of 3)	intron (NM_001291108, intron 3 of 3)	11769	NM_001291108	67068	Mm.23693	NM_025947	ENSMUSG00000047459	Dynlrb1	2010012N15Rik|2010320M17Rik|9430076K19Rik|AV124457|DNLC2A|Dncl2a|km23-1	dynein light chain roadblock-type 1	protein-coding
unique_peak2-37475-4-9--1.34538860874061-1.36011389749466	chr5	3432986	3433391	+	0	NA	intron (NM_009873, intron 3 of 6)	intron (NM_009873, intron 3 of 6)	88876	NM_009873	12571	Mm.31672	NM_009873	ENSMUSG00000040274	Cdk6	5830411I20|AI504062|Crk2	cyclin-dependent kinase 6	protein-coding
common_peak1-18243-43-44-0.290710089194028-0.566980988816338	chr8	32988648	32989923	+	0	NA	intron (NM_178591, intron 1 of 8)	intron (NM_178591, intron 1 of 8)	39390	NM_178591	211323	Mm.153432	NM_178591	ENSMUSG00000062991	Nrg1	6030402G23Rik|ARIA|D230005F13Rik|GGF|GGFII|HRG|HRGalpha|Hgl|NDF|SMDF	neuregulin 1	protein-coding
unique_peak1-1739-7-0-2.79909083029819-2.40823996531185	chr13	101831605	101832130	+	0	NA	Intergenic	Intergenic	-170215	NR_046158	328324	Mm.402274	NR_046158		5930438M14Rik	5930438M14	RIKEN cDNA 5930438M14 gene	ncRNA
common_peak1-8713-53-66-0.0748838219581565-0.340664206019335	chr11	96976806	96978016	+	0	NA	promoter-TSS (NM_019507)	promoter-TSS (NM_019507)	-766	NM_019507	57765	Mm.94519	NM_019507	ENSMUSG00000001444	Tbx21	TBT1|Tbet|Tblym	T-box 21	protein-coding
common_peak2-25671-22-4-2.32535601020004-3.9780981129625	chr19	10741353	10741730	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	11020	NM_021453	58803	Mm.34037	NM_021453	ENSMUSG00000024738	Pga5	1110035E17Rik|Pepf	pepsinogen 5, group I	protein-coding
unique_peak1-3331-10-3-1.35641534500877-1.75805390616669	chr18	84850428	84851067	+	0	NA	intron (NM_023149, intron 2 of 11)	intron (NM_023149, intron 2 of 11)	704	NM_001289531	66054	Mm.29646	NM_023149	ENSMUSG00000024644	Cndp2	0610010E05Rik|C76600|Cn2|Dip-2|Pep-1|Pep1	CNDP dipeptidase 2 (metallopeptidase M20 family)	protein-coding
common_peak2-21411-24-29--0.113680692840802-0.304839791830752	chr11	83753288	83754375	+	0	NA	Intergenic	Intergenic	-1761	NM_030096	78394	Mm.280544	NM_030096	ENSMUSG00000020677	Ddx52	2700029C06Rik|ROK1	DEAD (Asp-Glu-Ala-Asp) box polypeptide 52	protein-coding
common_peak2-30329-7-8--0.370834171144123-1.00793137938329	chr7	25154943	25155361	+	0	NA	promoter-TSS (NM_008433)	promoter-TSS (NM_008433)	-130	NM_001163510	16534	Mm.9911	NM_008433	ENSMUSG00000054342	Kcnn4	IK1|IKCA1|KCA4|KCa3.1|SK4|SKCas|mIKCa1	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4	protein-coding
unique_peak1-909-10-1-2.35641534500877-2.57096726280955	chr11	43344858	43345369	+	0	NA	intron (NM_001045530, intron 2 of 5)	intron (NM_001045530, intron 2 of 5)	2862	NM_001045530	380694	Mm.247595	NM_001045530	ENSMUSG00000044707	Ccnjl	Gm877	cyclin J-like	protein-coding
common_peak1-14677-24-41--0.599107520011044-0.83607543869935	chr3	63562430	63563241	+	0	NA	intron (NM_001177733, intron 5 of 23)	HAL1|LINE|L1	92078	NM_001177733	269437	Mm.316391	NM_183191	ENSMUSG00000036834	Plch1	BC042549|PLCeta1|Plcl3	phospholipase C, eta 1	protein-coding
unique_peak2-35602-0-6--3.64748585253182-1.56314192529759	chr17	80208639	80208970	+	0	NA	Intergenic	Intergenic	86659	NM_178050	56298	Mm.175403	NM_019717	ENSMUSG00000059811	Atl2	2010110I21Rik|AA407293|AV334690|Aip-2|Arl6ip2	atlastin GTPase 2	protein-coding
common_peak2-29049-57-82--0.109006391267996-0.335178273031072	chr5	115489726	115490400	+	0	NA	intron (NM_029012, intron 1 of 10)	intron (NM_029012, intron 1 of 10)	28530	NM_029012	74585	Mm.355894	NM_029012	ENSMUSG00000029550	Sppl3	4833416I09Rik|Psl4|Usmg3	signal peptide peptidase 3	protein-coding
common_peak2-25121-54-60-0.242348424066847-0.538245270207283	chr18	38631268	38632551	+	0	NA	Intergenic	Intergenic	53280	NM_022996	65113	Mm.102496	NM_022996	ENSMUSG00000024425	Ndfip1	0610010M22Rik|N4wbp5	Nedd4 family interacting protein 1	protein-coding
unique_peak2-34891-6-10--0.894033508256995-1.21398586181642	chr15	80977607	80978205	+	0	NA	intron (NM_001082536, intron 1 of 13)	MERVL-int|LTR|ERVL	-42429	NM_153049	223701	Mm.439814	NM_153049	ENSMUSG00000042292	Mkl1	AMKL|Bsac|Mal|Mrtf-A	MKL (megakaryoblastic leukemia)/myocardin-like 1	protein-coding
common_peak2-27721-19-14-0.495796731053168-0.607095980551316	chr3	122887958	122888734	+	0	NA	intron (NM_080451, intron 1 of 4)	RCHARR1|DNA|MER1_type	50721	NM_080451	118449	Mm.34359	NM_080451	ENSMUSG00000050315	Synpo2	1110069I04Rik|2310068J10Rik|9530006G20Rik|AI848603|Myo	synaptopodin 2	protein-coding
unique_peak1-7428-11-1-2.50869358425161-2.83420869758413	chrX	164016121	164016693	+	0	NA	intron (NM_001290427, intron 5 of 17)	L1_Mus2|LINE|L1	-195776	NM_026662	110639	Mm.272955	NM_026662	ENSMUSG00000025742	Prps2	2610101M19Rik|AA589463|AI464149|Prps-2	phosphoribosyl pyrophosphate synthetase 2	protein-coding
common_peak2-21143-16-19--0.203664452619301-0.325169893479371	chr11	55417752	55418419	+	0	NA	intron (NM_001290821, intron 1 of 8)	intron (NM_001290821, intron 1 of 8)	3615	NM_001290821	14654	Mm.89320	NM_020492		Glra1	nmf11|oscillator|ot|spasmodic|spd	glycine receptor, alpha 1 subunit	protein-coding
common_peak2-29701-12-15--0.351224014912361-0.332077462497413	chr6	83052428	83053199	+	0	NA	intron (NM_001081266, intron 1 of 8)	intron (NM_001081266, intron 1 of 8)	1303	NM_001081266	243510	Mm.436553	NM_001081266	ENSMUSG00000079511	Ccdc142	A230058J24Rik	coiled-coil domain containing 142	protein-coding
common_peak1-16794-17-7-1.21829633820504-1.55050753388977	chr6	42261720	42262395	+	0	NA	intron (NM_013491, intron 20 of 22)	intron (NM_013491, intron 20 of 22)	12582	NM_001286584	76156	Mm.234314	NM_029528	ENSMUSG00000029861	Fam131b	6330503C03Rik|6530406I18Rik|AV277466	family with sequence similarity 131, member B	protein-coding
common_peak1-13104-30-10-1.71024379085458-3.68843956647704	chr19	8723369	8724448	+	0	NA	Intergenic	L1M5|LINE|L1	13917	NR_045314	402757	Mm.150255	NR_045314		9830166K06Rik	-	RIKEN cDNA 9830166K06 gene	ncRNA
unique_peak1-3035-17-1-3.21829633820504-4.59734841376773	chr18	65584298	65585226	+	0	NA	Intergenic	Intergenic	-5889	NM_172833	240354	Mm.132613	NM_172833	ENSMUSG00000032688	Malt1	A630046N12|D430033E09Rik	mucosa associated lymphoid tissue lymphoma translocation gene 1	protein-coding
common_peak1-7547-11-10-0.0492619656143161-0.31137425193576	chr1	36691429	36691989	+	0	NA	intron (NM_001126046, intron 5 of 14)	intron (NM_001126046, intron 5 of 14)	-41532	NM_027957	381337	Mm.17413	NM_027957	ENSMUSG00000046337	Fam178b	1700024G10Rik|Gm990	family with sequence similarity 178, member B	protein-coding
common_peak1-12707-49-92--0.532874988082847-1.3982704267089	chr18	46524932	46525915	+	0	NA	Intergenic	Intergenic	-53841	NM_001160399	240261	Mm.329416	NM_001160399	ENSMUSG00000071855	Ccdc112	8430438M01Rik|AW108467	coiled-coil domain containing 112	protein-coding
common_peak2-29841-48-88--0.504806279731583-1.20397006444706	chr6	97148052	97149345	+	0	NA	intron (NM_001111106, intron 4 of 16)	intron (NM_001111106, intron 4 of 16)	6938	NM_001111106	22200	Mm.277626	NM_011666	ENSMUSG00000030061	Uba3	A830034N06Rik|AI256736|AI848246|AW546539|Ube1c	ubiquitin-like modifier activating enzyme 3	protein-coding
common_peak1-19039-36-19-1.15739299128039-2.66231292118422	chr9	65196323	65197158	+	0	NA	intron (NM_016688, intron 1 of 4)	intron (NM_016688, intron 1 of 4)	2865	NM_016688	50996	Mm.29193	NM_016688	ENSMUSG00000041837	Pdcd7	C80112|ES18	programmed cell death 7	protein-coding
unique_peak1-6396-10-3-1.35641534500877-1.75805390616669	chr7	79313423	79313958	+	0	NA	intron (NM_001024703, intron 14 of 22)	intron (NM_001024703, intron 14 of 22)	137791	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding
common_peak1-16203-16-19--0.203664452619301-0.325169893479371	chr5	92960522	92961275	+	0	NA	Intergenic	IAPEY_LTR|LTR|ERVK	-26264	NM_007644	12492	Mm.297964	NM_007644	ENSMUSG00000029426	Scarb2	9330185J12Rik|Cd36l2|LGP85|LIMP-2|MLGP85	scavenger receptor class B, member 2	protein-coding
common_peak1-15389-14-20--0.493101262421116-0.456667090758524	chr4	75277730	75278461	+	0	NA	Intergenic	Intergenic	-353905	NM_025849	66928	Mm.24332	NM_025849	ENSMUSG00000028398	Tmem261	1700027K24Rik|3110001D03Rik	transmembrane protein 261	protein-coding
common_peak2-28778-11-15--0.491306415748387-0.435191258261915	chr5	53588876	53589528	+	0	NA	intron (NM_172710, intron 2 of 23)	intron (NM_172710, intron 2 of 23)	15489	NM_172710	231238	Mm.235020	NM_172710	ENSMUSG00000029189	Sel1l3	2310045A20Rik|AI429585|mKIAA0746	sel-1 suppressor of lin-12-like 3 (C. elegans)	protein-coding
unique_peak2-35670-2-8--2.08737925770563-1.65811743852845	chr18	11644046	11644427	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-147549	NM_001252495	225182	Mm.154275	NM_175458	ENSMUSG00000041238	Rbbp8	9930104E21Rik|CtIP|RBBP-8|RIM|SAE2	retinoblastoma binding protein 8	protein-coding
common_peak2-25502-32-23-0.694129518498504-1.20786488037717	chr19	5433354	5434111	+	0	NA	Intergenic	Intergenic	8588	NM_001256515	107242	Mm.329658	NM_134149	ENSMUSG00000047423	AI837181	Bles03|N28173	expressed sequence AI837181	protein-coding
unique_peak2-33072-7-8--0.370834171144123-1.00793137938329	chr10	79704417	79704898	+	0	NA	intron (NM_023431, intron 13 of 13)	intron (NM_023431, intron 13 of 13)	-7540	NM_029272	75406	Mm.28712	NM_029272	ENSMUSG00000020153	Ndufs7	1010001M04Rik	NADH dehydrogenase (ubiquinone) Fe-S protein 7	protein-coding
common_peak1-14936-23-12-1.02132778636799-1.44787515926925	chr3	102723451	102724660	+	0	NA	intron (NM_011516, intron 12 of 32)	MTD|LTR|MaLR	15968	NM_011516	20957	Mm.243849	NM_011516	ENSMUSG00000027855	Sycp1	SCP1	synaptonemal complex protein 1	protein-coding
unique_peak2-38444-2-10--2.37688587490062-2.09384600808989	chr7	27804983	27805418	+	0	NA	Intergenic	MMERVK10C-int|LTR|ERVK	-8909	NM_133657	13085	Mm.20770	NM_133657	ENSMUSG00000060407	Cyp2a12	-	cytochrome P450, family 2, subfamily a, polypeptide 12	protein-coding
unique_peak1-3737-8-5-0.420259917226415-1.10484139239135	chr19	46972937	46973475	+	0	NA	intron (NM_029810, intron 6 of 17)	intron (NM_029810, intron 6 of 17)	63635	NM_029810	76952	Mm.40965	NM_029810	ENSMUSG00000025041	Nt5c2	2010002I23Rik|CnII|ENSMUSG00000025039|Gm9751|Gmp|Nt5b|Pnt5|cN-II	5'-nucleotidase, cytosolic II	protein-coding
common_peak2-30966-36-44--0.0125320101619204-0.303469903643781	chr8	117258633	117260499	+	0	NA	intron (NM_019573, intron 8 of 8)	intron (NM_019573, intron 8 of 8)	296014	NM_019573	80707	Mm.440420	NM_019573	ENSMUSG00000004637	Wwox	5330426P09Rik|9030416C10Rik|WOX1	WW domain-containing oxidoreductase	protein-coding
common_peak2-25973-61-123--0.571446980637535-1.99837208065853	chr19	53528438	53530150	+	0	NA	intron (NR_028427, intron 2 of 9)	intron (NR_028427, intron 2 of 9)	9992	NR_028427	381232	Mm.248624	NR_028427	ENSMUSG00000097636	5830416P10Rik	4833407H14Rik|5430437C04Rik|ENSMUSG00000074788|Gm10758	RIKEN cDNA 5830416P10 gene	ncRNA
common_peak1-15113-15-17--0.157760250886656-0.307611222530528	chr3	135522079	135522800	+	0	NA	intron (NM_001135149, intron 6 of 8)	intron (NM_001135149, intron 6 of 8)	-19206	NR_040540	71038	Mm.410798	NR_040540		4933401H06Rik	-	RIKEN cDNA 4933401H06 gene	ncRNA
common_peak1-14464-65-83-0.0998485166983665-0.362550921004498	chr3	88685140	88686624	+	0	NA	intron (NM_001242372, intron 15 of 32)	intron (NM_001242372, intron 15 of 32)	31990	NM_144898	229524	Mm.440405	NM_144898	ENSMUSG00000068922	Msto1	BC008103|mst	misato homolog 1 (Drosophila)	protein-coding
common_peak2-19907-27-37--0.256381562548349-0.379775532323854	chr1	118459075	118459800	+	0	NA	intron (NM_001077425, intron 21 of 23)	intron (NM_001077425, intron 21 of 23)	877723	NM_001077425	636808	Mm.101576	NM_001077425	ENSMUSG00000070695	Cntnap5a	Caspr5-1|EG636808	contactin associated protein-like 5A	protein-coding
common_peak1-15814-8-18--1.24270509549601-1.15812782348128	chr5	76529229	76529672	+	0	NA	Intergenic	Intergenic	-39848	NM_020611	57357	Mm.289446	NM_020611	ENSMUSG00000029233	Srd5a3	1110025P14Rik|A430076C09|AV364670|AW987574|D730040M03Rik|H5ar|S5AR 3|Srd5a2l	steroid 5 alpha-reductase 3	protein-coding
common_peak2-26548-17-16-0.130833496954699-0.356936432242225	chr2	93822102	93822603	+	0	NA	intron (NM_026944, intron 8 of 9)	URR1B|DNA|MER1_type	2161	NR_045827	70852	Mm.437014	NR_045827	ENSMUSG00000027196	4921507L20Rik	-	RIKEN cDNA 4921507L20 gene	ncRNA
common_peak2-22026-4-5--0.608423014574403-0.909929411522249	chr12	59206347	59206624	+	0	NA	Intergenic	Lx3_Mus|LINE|L1	-106306	NM_009216	20605	Mm.278336	NM_009216		Sstr1	SRIF-2|SS-1-R|SS1-R|SS1R|Smstr-1|Smstr1|sst1	somatostatin receptor 1	protein-coding
common_peak2-24533-22-17-0.477359103645092-0.633951497070961	chr17	27084165	27084813	+	0	NA	TTS (NR_037244)	TTS (NR_037244)	575	NR_037244	100526534		NR_037244	miRBase:MI0014046	Mir3083	mmu-mir-3083	microRNA 3083	ncRNA
unique_peak1-1838-28-3-3.05295911982146-6.65354359207424	chr14	43249944	43251517	+	0	NA	Intergenic	L1_Rod|LINE|L1	126012	NM_001244671	100042055	Mm.429109	NM_001244671	ENSMUSG00000095226	Gm10377	ENSMUSG00000072606	predicted gene 10377	protein-coding
common_peak2-24365-18-11-0.727956650507195-0.876666802405043	chr17	6812573	6813147	+	0	NA	TTS (NM_001166630).3	TTS (NM_001166630).3	6364	NM_001166630	100040563	Mm.457381	NM_001166630		Dynlt1c	100040603|Dynlt1d	dynein light chain Tctex-type 1C	protein-coding
unique_peak2-32531-3-7--1.41398308995928-1.23214870625617	chr1	64005408	64005762	+	0	NA	Intergenic	Intergenic	-5716	NR_027824	433315	Mm.342696	NM_001013800	ENSMUSG00000044689	Gm13749	OTTMUSG00000013918	predicted gene 13749	ncRNA
common_peak2-26132-14-17--0.270708841084668-0.328191099940267	chr2	11398296	11399001	+	0	NA	intron (NM_001177753, intron 16 of 17)	intron (NM_001177753, intron 16 of 17)	25069	NM_001177754	170768	Mm.19669	NM_133232	ENSMUSG00000026773	Pfkfb3	E330010H22Rik|iPFK-2|uPFK-2	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	protein-coding
unique_peak1-2176-8-1-2.00522241794757-2.05605744720049	chr15	61606349	61606853	+	0	NA	promoter-TSS (NR_040350)	promoter-TSS (NR_040350)	-595	NR_040350	432956	Mm.404918	NR_040350		D030024E09Rik	-	RIKEN cDNA D030024E09 gene	ncRNA
common_peak2-31606-38-78--0.732328088878573-1.86707916839833	chr8	122550159	122551722	+	0	NA	intron (NM_030209, intron 8 of 14)	intron (NM_030209, intron 8 of 14)	34570	NM_030209	78892	Mm.264680	NM_030209	ENSMUSG00000031825	Crispld2	1810049K24Rik|Lcrisp2|Lgl1|coffeecrisp	cysteine-rich secretory protein LCCL domain containing 2	protein-coding
common_peak2-27718-9-11--0.395349094316936-0.344532117358383	chr3	122521030	122521505	+	0	NA	intron (NM_153422, intron 12 of 20)	intron (NM_153422, intron 12 of 20)	-16369	NR_045168	71647	Mm.449992	NR_045168		4930447N08Rik	-	RIKEN cDNA 4930447N08 gene	ncRNA
common_peak1-18716-13-5-1.19350952991661-1.95509489018123	chr8	122989962	122990462	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-22554	NM_198671	382034	Mm.334856	NM_198671	ENSMUSG00000031822	Gse1	2210013I18Rik|mKIAA0182	genetic suppressor element 1	protein-coding
common_peak1-17605-40-57--0.199005312376474-0.373449689110125	chr7	45016475	45017768	+	0	NA	Intergenic	Intergenic	1502783	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak1-10561-35-43--0.0280613601747932-0.301029995663985	chr14	20733761	20734903	+	0	NA	intron (NM_001285910, intron 1 of 2)	Lx9|LINE|L1	61583	NM_001285911	14702	Mm.41737	NM_010315	ENSMUSG00000043004	Gng2	82	guanine nucleotide binding protein (G protein), gamma 2	protein-coding
unique_peak2-32943-11-22--1.0148683718054-1.11267835143409	chr10	40246623	40247300	+	0	NA	Intergenic	Intergenic	-43207	NM_027572	70840	Mm.332570	NM_027572	ENSMUSG00000019834	Slc22a16	4921504E14Rik|CT2|FLIPT2|OCT6|OKB1	solute carrier family 22 (organic cation transporter), member 16	protein-coding
unique_peak2-37568-1-7--2.62705701021674-1.80617997398389	chr5	34188079	34188392	+	0	NA	intron (NM_175231, intron 1 of 20)	MIRc|SINE|MIR	2474	NM_001081102	107823	Mm.19892	NM_175231	ENSMUSG00000057406	Whsc1	5830445G22Rik|9430010A17Rik|AW555663|C130020C13Rik|D030027O06Rik|D930023B08Rik|MMSET|NSD2|Whsc1l|mKIAA1090	Wolf-Hirschhorn syndrome candidate 1 (human)	protein-coding
common_peak2-26286-11-5-0.923731083530457-1.477227296591	chr2	30900282	30900556	+	0	NA	intron (NM_001177648, intron 10 of 16)	intron (NM_001177648, intron 10 of 16)	51601	NM_001177650	14269	Mm.52297	NM_019406	ENSMUSG00000075415	Fnbp1	1110057E06Rik|2210010H06Rik|FBP1|Fbp17	formin binding protein 1	protein-coding
common_peak2-22343-30-17-0.999750408049561-1.81352036806616	chr13	23739552	23740298	+	0	NA	Intergenic	Intergenic	-25498	NM_015787	50709	Mm.170587	NM_015787		Hist1h1e	H1-4|H1e|H1f4|H1s-4|H1var2	histone cluster 1, H1e	protein-coding
common_peak1-16971-58-27-1.48859501283289-6.0871496622179	chr6	86486834	86488679	+	0	NA	intron (NR_037960, intron 3 of 4)	intron (NR_037960, intron 3 of 4)	10361	NR_037961	72012	Mm.349174	NR_037960	ENSMUSG00000097048	1600020E01Rik	-	RIKEN cDNA 1600020E01 gene	ncRNA
unique_peak2-37362-5-4--0.0263084308932156-0.909929411522249	chr4	135645147	135645567	+	0	NA	Intergenic	Intergenic	-36071	NM_025919	67025	Mm.276856	NM_025919	ENSMUSG00000059291	Rpl11	2010203J19Rik	ribosomal protein L11	protein-coding
unique_peak2-32639-4-6--0.830815435910851-0.989110657569874	chr1	128359221	128359620	+	0	NA	intron (NM_001081756, intron 3 of 16)	intron (NM_001081756, intron 3 of 16)	30084	NM_172484	210356	Mm.377234	NM_172484	ENSMUSG00000049690	Nckap5	8430408F21|D130011D22Rik|E030049G20Rik|Erih1|Erih2|Gm1548|Nap5	NCK-associated protein 5	protein-coding
unique_peak1-7131-10-0-3.35641534500877-3.31132995230379	chr9	50533838	50534332	+	0	NA	intron (NM_178118, intron 1 of 19)	intron (NM_178118, intron 1 of 19)	2004	NM_178118	330938	Mm.82598	NM_178118	ENSMUSG00000032064	Dixdc1	4930563F16Rik|BC048182|Ccd1|Ccd1Aalpha1L|Ccd1Abeta1L|Ccd1BalphaL|Ccd1BbetaL|Ccd1CL|mKIAA1735	DIX domain containing 1	protein-coding
unique_peak1-6353-8-3-1.00522241794757-1.39487600375387	chr7	63919270	63919698	+	0	NA	Intergenic	L1Md_A|LINE|L1	424343	NM_021879	18431	Mm.137052	NM_021879	ENSMUSG00000030450	Oca2	D7H15S12|D7Icr28RN|D7Nic1|p	oculocutaneous albinism II	protein-coding
common_peak1-8064-13-31--1.22152796936223-1.73082168901047	chr1	175692093	175692759	+	0	NA	intron (NM_008329, intron 1 of 8)	ORR1E|LTR|MaLR	4624	NM_008329	15951	Mm.261270	NM_008329	ENSMUSG00000073489	Ifi204	Ifi16|p204	interferon activated gene 204	protein-coding
unique_peak1-7250-6-3-0.565398110380302-1.08602067057793	chr9	78255579	78256094	+	0	NA	intron (NM_001191044, intron 5 of 16)	B4A|SINE|B4	12252	NM_001191044	100048658	Mm.158166	NM_001191044	ENSMUSG00000070291	Ddx43	ENSMUSG00000070291|OTTMUSG00000019690	DEAD (Asp-Glu-Ala-Asp) box polypeptide 43	protein-coding
unique_peak1-5268-10-1-2.35641534500877-2.57096726280955	chr5	64595029	64595589	+	0	NA	intron (NM_019636, intron 2 of 19)	MER58A|DNA|MER1_type	-26287	NM_001289514	57915	Mm.286353	NM_019636	ENSMUSG00000029174	Tbc1d1	1110062G02Rik|AI385682|AW555803|Tbc1|mKIAA1108	TBC1 domain family, member 1	protein-coding
unique_peak2-33669-5-13--1.51173525806346-1.78669045979184	chr11	101119136	101119938	+	0	NA	TTS (NM_001284414)	TTS (NM_001284414)	-2344	NM_175638	69847	Mm.23656	NM_175638	ENSMUSG00000035112	Wnk4	2010002J11Rik|Pha2b|Prkwnk4	WNK lysine deficient protein kinase 4	protein-coding
common_peak1-15155-26-49--0.715957097616262-1.30310500416066	chr3	146447903	146448723	+	0	NA	intron (NM_011100, intron 1 of 9)	ORR1A2|LTR|MaLR	-3933	NM_001164200	18749	Mm.16766	NM_011100	ENSMUSG00000005034	Prkacb	Pkacb	protein kinase, cAMP dependent, catalytic, beta	protein-coding
unique_peak1-5859-8-1-2.00522241794757-2.05605744720049	chr6	84260899	84261416	+	0	NA	Intergenic	Intergenic	112675	NR_046063	100038556	Mm.387783	NR_046063		Gm10445	ENSMUSG00000072956	predicted gene 10445	ncRNA
common_peak2-21955-13-23--0.806490470083387-0.781208772652439	chr12	32954090	32954924	+	0	NA	Intergenic	L1_Mur1|LINE|L1	-60993	NM_001146200	30955	Mm.101369	NM_020272	ENSMUSG00000020573	Pik3cg	5830428L06Rik|PI3Kgamma|p110gamma	phosphoinositide-3-kinase, catalytic, gamma polypeptide	protein-coding
unique_peak1-3633-8-2-1.42025991722641-1.65811743852845	chr19	37884004	37884634	+	0	NA	Intergenic	MER117|DNA|MER1_type	112021	NM_007811	13082	Mm.42230	NM_007811	ENSMUSG00000024987	Cyp26a1	Cyp26|P450RA|P450RAI|RAH	cytochrome P450, family 26, subfamily a, polypeptide 1	protein-coding
unique_peak1-5353-11-7-0.508693584251613-1.21681515183528	chr5	92281809	92282352	+	0	NA	Intergenic	Intergenic	-85754	NR_045383	73452	Mm.396233	NR_045383		1700063O14Rik	-	RIKEN cDNA 1700063O14 gene	ncRNA
common_peak1-12406-20-29--0.418815811017326-0.51032171069054	chr17	72828540	72829473	+	0	NA	intron (NM_007439, intron 1 of 28)	LTRIS2|LTR|ERV1	124641	NM_007439	11682	Mm.311854	NM_007439	ENSMUSG00000055471	Alk	CD246|Tcrz	anaplastic lymphoma kinase	protein-coding
common_peak2-31914-28-38--0.232443099040786-0.377553616161376	chr9	60501642	60502921	+	0	NA	intron (NM_145616, intron 8 of 16)	intron (NM_145616, intron 8 of 16)	33060	NM_001146047	102747	Mm.269413	NM_145616	ENSMUSG00000047766	Lrrc49	AI430817|AW050057|D430025H09Rik|PGs4|p79	leucine rich repeat containing 49	protein-coding
unique_peak2-34282-9-6-0.382258484346616-1.11707584880836	chr13	72710478	72711000	+	0	NA	Intergenic	Intergenic	55273	NR_030701	328287	Mm.235072	NR_030701		Gm20554	D430050G20	predicted gene, 20554	ncRNA
common_peak1-9965-9-18--1.05831410703937-0.965105923112245	chr12	112722134	112722658	+	0	NA	TTS (NM_001033248)	TTS (NM_001033248)	1638	NM_001033248	212539	Mm.81916	NM_001033248	ENSMUSG00000010529	Gm266	-	predicted gene 266	protein-coding
unique_peak1-6643-10-1-2.35641534500877-2.57096726280955	chr8	11254464	11254970	+	0	NA	intron (NM_009931, intron 2 of 51)	B1F|SINE|Alu	58109	NM_009931	12826	Mm.738	NM_009931	ENSMUSG00000031502	Col4a1	Bru|Col4a-1|Del(8)44H|Raw|Svc	collagen, type IV, alpha 1	protein-coding
common_peak2-23081-63-69-0.309029574125623-0.753034214639445	chr14	75845287	75846179	+	0	NA	Intergenic	Intergenic	-10056	NM_001128093	380918	Mm.484360	NM_001128093	ENSMUSG00000091722	Siah3	Gm912	seven in absentia homolog 3 (Drosophila)	protein-coding
common_peak1-15460-36-53--0.275566415995714-0.442998361601932	chr4	101355882	101356814	+	0	NA	Intergenic	Intergenic	-33664	NM_001122899	16847	Mm.259282	NM_010704	ENSMUSG00000057722	Lepr	LEPROT|Leprb|Modb1|OB-RGRP|Obr|db|diabetes|obese-like|obl	leptin receptor	protein-coding
common_peak2-20356-14-45--1.62434579569937-3.70968671820991	chr10	9900364	9901246	+	0	NA	Intergenic	MER58A|DNA|MER1_type	-279967	NM_001081344	78808	Mm.331751	NM_030191	ENSMUSG00000019790	Stxbp5	0710001E20Rik|4930565N16Rik|AW742610|LGL3|mKIAA1006	syntaxin binding protein 5 (tomosyn)	protein-coding
common_peak1-18749-25-13-1.0544949832875-1.65862513589797	chr8	126497083	126498313	+	0	NA	intron (NM_019552, intron 1 of 12)	B3|SINE|B2	9324	NM_019552	56199	Mm.274243	NM_019552	ENSMUSG00000031974	Abcb10	Abc-me|Abcb12	ATP-binding cassette, sub-family B (MDR/TAP), member 10	protein-coding
unique_peak1-2098-12-4-1.32684789020028-2.04196296489515	chr15	37318822	37319458	+	0	NA	intron (NM_001170866, intron 5 of 6)	B2_Mm2|SINE|B2	-36169	NM_029113	74892	Mm.107630	NM_029113	ENSMUSG00000022288	4930447A16Rik	-	RIKEN cDNA 4930447A16 gene	protein-coding
common_peak1-10870-33-30-0.377141252138654-0.612304185853042	chr15	36716204	36717074	+	0	NA	intron (NM_001253807, intron 1 of 4)	intron (NM_001253807, intron 1 of 4)	4048	NM_001253807	22631	Mm.3360	NM_011740	ENSMUSG00000022285	Ywhaz	1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	protein-coding
unique_peak1-2018-8-1-2.00522241794757-2.05605744720049	chr15	10641420	10641915	+	0	NA	intron (NM_001166408, intron 1 of 17)	intron (NM_001166408, intron 1 of 17)	1628	NM_030690	75646	Mm.212395	NM_030690	ENSMUSG00000022246	Rai14	1700008J19Rik|1700020L11Rik|Ankycorbin|Norpeg|mKIAA1334	retinoic acid induced 14	protein-coding
common_peak2-27163-81-91-0.348487646951552-1.00860794703809	chr3	30995286	30997065	+	0	NA	5' UTR (NM_011386, exon 2 of 7)	5' UTR (NM_011386, exon 2 of 7)	2195	NM_001039090	20482	Mm.15406	NM_011386	ENSMUSG00000027660	Skil	Skir|SnoN|sno	SKI-like	protein-coding
unique_peak2-35574-5-6--0.511735258063458-0.947717972411649	chr17	70845266	70845540	+	0	NA	intron (NM_027712, intron 1 of 9)	AT_rich|Low_complexity|Low_complexity	-26047	NM_001128180	224997	Mm.311840	NM_027712	ENSMUSG00000003279	Dlgap1	4933422O14Rik|9630002F18|AI845682|AI848168|BB075781|D17Bwg0511e|GKAP/SAPAP|GKPA/SAPAP|Gkap|Sapap1|mKIAA4162	discs, large (Drosophila) homolog-associated protein 1	protein-coding
unique_peak2-33692-1-6--2.43441193227435-1.56314192529759	chr11	105328301	105328693	+	0	NA	Intergenic	GC_rich|Low_complexity|Low_complexity	-10448	NM_001039242	632687	Mm.121570	NM_172568	ENSMUSG00000078627	March10	4933417C16Rik|AV039223|OTTMUSG00000002847|Rnf190	membrane-associated ring finger (C3HC4) 10	protein-coding
unique_peak2-35298-7-8--0.370834171144123-1.00793137938329	chr17	10721285	10721671	+	0	NA	intron (NM_027032, intron 4 of 4)	intron (NM_027032, intron 4 of 4)	72396	NR_077238	319750	Mm.383485	NR_077237	ENSMUSG00000089633	A230009B12Rik	-	RIKEN cDNA A230009B12 gene	ncRNA
common_peak1-14531-20-29--0.418815811017326-0.51032171069054	chr3	30511456	30512425	+	0	NA	intron (NM_030557, intron 6 of 7)	intron (NM_030557, intron 6 of 7)	10931	NM_001289621	80732	Mm.200378	NM_030557	ENSMUSG00000037730	Mynn	2810011C24Rik|AA415053|AI661031|AW049392|Mynr|SBBIZ1	myoneurin	protein-coding
unique_peak2-39049-5-11--1.28934283672701-1.477227296591	chr8	70539588	70540254	+	0	NA	Intergenic	Intergenic	-41448	NM_177698	234353	Mm.32525	NM_027626	ENSMUSG00000030465	Psd3	4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D	pleckstrin and Sec7 domain containing 3	protein-coding
unique_peak1-4598-12-2-2.06381348436648-2.79529063155376	chr3	60570385	60570908	+	0	NA	Intergenic	RMER13A|LTR|ERVK	-236061	NM_008772	18441	Mm.281452	NM_008772	ENSMUSG00000027765	P2ry1	P2Y1	purinergic receptor P2Y, G-protein coupled 1	protein-coding
common_peak2-20222-15-8-0.842239749113344-0.891319708951327	chr1	180783193	180783761	+	0	NA	intron (NM_001161665, intron 5 of 14)	intron (NM_001161665, intron 5 of 14)	324221	NM_001161665	269152	Mm.129727	NM_177724	ENSMUSG00000026494	Kif26b	4832420M10|BC056349|D230039L06Rik	kinesin family member 26B	protein-coding
common_peak2-30320-18-14-0.406028555619833-0.532159081577619	chr7	24531220	24531955	+	0	NA	Intergenic	L1Md_F3|LINE|L1	-7343	NM_207548	404291	Mm.160375	NM_207548	ENSMUSG00000090411	Vmn1r174	V1rd22	vomeronasal 1 receptor 174	protein-coding
unique_peak2-37010-3-6--1.22133801201688-1.08602067057793	chr3	122475691	122476098	+	0	NA	intron (NM_153422, intron 3 of 20)	intron (NM_153422, intron 3 of 20)	29004	NR_045168	71647	Mm.449992	NR_045168		4930447N08Rik	-	RIKEN cDNA 4930447N08 gene	ncRNA
common_peak2-23565-39-23-1.030798746198-2.3865980902211	chr15	79369326	79370186	+	0	NA	exon (NM_199079, exon 6 of 11)	exon (NM_199079, exon 6 of 11)	-6409	NM_152806	67040	Mm.29644	NM_152806	ENSMUSG00000055065	Ddx17	2610007K22Rik|A430025E01Rik|AI047725|C80929|Gm926|p72	DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	protein-coding
common_peak1-17228-72-78-0.364803064695215-0.997974826158522	chr6	127148756	127150129	+	0	NA	intron (NR_040273, intron 2 of 2)	RLTR25B|LTR|ERVK	-48376	NM_009829	12444	Mm.333406	NM_009829	ENSMUSG00000000184	Ccnd2	2600016F06Rik|AI256817|BF642806|C86853|Vin-1|Vin1|cD2	cyclin D2	protein-coding
common_peak1-8702-72-64-0.646215999843863-2.20680251592002	chr11	83852447	83854448	+	0	NA	intron (NM_194341, intron 19 of 19)	intron (NM_194341, intron 19 of 19)	28412	NM_019819	56405	Mm.240885	NM_019819	ENSMUSG00000018648	Dusp14	1110014C10Rik|2310042C07Rik|D11Ertd395e|MKP-L|Mkp6	dual specificity phosphatase 14	protein-coding
unique_peak2-33003-5-6--0.511735258063458-0.947717972411649	chr10	61648587	61648957	+	0	NA	3' UTR (NM_197996, exon 8 of 8)	3' UTR (NM_197996, exon 8 of 8)	8203	NR_106122	102465767		NR_106122		Mir7662	mmu-mir-7662	microRNA mir-7662	ncRNA
common_peak2-30527-13-17--0.391452970804544-0.364171515310935	chr7	66581063	66581756	+	0	NA	Intergenic	L1MC|LINE|L1	-1890	NR_015479	330544	Mm.9002	NR_015479		C230091D08Rik	-	RIKEN cDNA C230091D08 gene	ncRNA
common_peak2-20964-18-25--0.38752056691274-0.421916810733234	chr11	20200497	20201110	+	0	NA	Intergenic	RMER15|LTR|ERVL	31913	NM_018861	55963	Mm.6379	NM_018861	ENSMUSG00000020142	Slc1a4	ASCT-1|ASCT1|AW045657|SATT	solute carrier family 1 (glutamate/neutral amino acid transporter), member 4	protein-coding
common_peak1-15833-32-65--0.765302100138793-1.72757011346395	chr5	137313544	137314801	+	0	NA	intron (NM_024474, intron 2 of 12)	HAL1|LINE|L1	44805	NM_024474	140709	Mm.295020	NM_024474	ENSMUSG00000004415	Col26a1	9430032K24Rik|BC002218|Col26a|Emid2|Emu2	collagen, type XXVI, alpha 1	protein-coding
common_peak1-12225-42-28-0.884348332739612-2.12244165266811	chr17	34951677	34952957	+	0	NA	exon (NM_011413, exon 23 of 41)	exon (NM_011413, exon 23 of 41)	8082	NM_011413	625018	Mm.439678	NM_011413		C4a	Slp	complement component 4A (Rodgers blood group)	protein-coding
unique_peak2-36480-15-19--0.309763344331706-0.356936432242222	chr2	150771925	150772932	+	0	NA	intron (NM_207204, intron 17 of 23)	intron (NM_207204, intron 17 of 23)	37098	NM_001163476	69270	Mm.271603	NM_027014	ENSMUSG00000027454	Gins1	2810418N01Rik|Gins4|PSF1|mKIAA0186	GINS complex subunit 1 (Psf1 homolog)	protein-coding
common_peak1-7981-14-17--0.270708841084668-0.328191099940267	chr1	160195174	160195877	+	0	NA	intron (NM_207583, intron 4 of 7)	L2a|LINE|L2	90866	NM_207583	240843	Mm.329579	NM_207583	ENSMUSG00000004031	Brinp2	6430517E21Rik|BB361039|Fam5b|mKIAA1747	bone morphogenic protein/retinoic acid inducible neural-specific 2	protein-coding
common_peak2-28693-3-9--1.73591118484664-1.57096726280955	chr5	33651672	33652047	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-26362	NM_021500	59003	Mm.281642	NM_021500	ENSMUSG00000079562	Maea	1110030D19Rik|EMP|Gid9	macrophage erythroblast attacher	protein-coding
common_peak2-32390-6-8--0.60452689106201-1.03789460276074	chrX	134585697	134586130	+	0	NA	intron (NM_030688, intron 2 of 10)	intron (NM_030688, intron 2 of 10)	158206	NM_026469	67944	Mm.443280	NM_026469	ENSMUSG00000071686	Tex13a	1700025D03Rik	testis expressed 13A	protein-coding
unique_peak1-933-8-3-1.00522241794757-1.39487600375387	chr11	53761492	53761881	+	0	NA	Intergenic	Intergenic	31843	NM_019723	56517	Mm.154284	NM_019723	ENSMUSG00000063652	Slc22a21	Octn3|Slc22a9	solute carrier family 22 (organic cation transporter), member 21	protein-coding
unique_peak1-6715-14-3-1.89921616035764-2.80787975886178	chr8	39044590	39045227	+	0	NA	intron (NM_145841, intron 1 of 7)	intron (NM_145841, intron 1 of 7)	270348	NR_029884	723860		NR_029884		Mir383	Mirn383|mmu-mir-383	microRNA 383	ncRNA
common_peak2-30557-31-31-0.225238670813123-0.416139936131877	chr7	78846558	78847358	+	0	NA	Intergenic	RMER17A2|LTR|ERVK	604523	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding
unique_peak2-32511-1-9--2.94898510510411-2.31132995230379	chr1	53695283	53695774	+	0	NA	intron (NM_001252070, intron 11 of 65)	L1MB7|LINE|L1	68100	NM_001252070	627872	Mm.184692	NM_001252070	ENSMUSG00000096141	Dnah7a	Dnahc7|Dnahc7a|Gm992	dynein, axonemal, heavy chain 7A	protein-coding
unique_peak2-36296-5-9--1.02630843089322-1.21398586181642	chr2	71698221	71698783	+	0	NA	Intergenic	Intergenic	-12779	NM_172665	228026	Mm.34411	NM_172665	ENSMUSG00000006494	Pdk1	B830012B01|D530020C15Rik	pyruvate dehydrogenase kinase, isoenzyme 1	protein-coding
unique_peak1-4575-20-9-1.16614668970383-1.52222891542741	chr3	57079056	57079808	+	0	NA	Intergenic	AT_rich|Low_complexity|Low_complexity	26409	NM_008536	17112	Mm.856	NM_008536	ENSMUSG00000027800	Tm4sf1	L6|M3s1	transmembrane 4 superfamily member 1	protein-coding
unique_peak1-6368-7-0-2.79909083029819-2.40823996531185	chr7	67083400	67083925	+	0	NA	Intergenic	Intergenic	35655	NR_015456	52480	Mm.482346	NR_015456		D7Ertd715e	AU018661	DNA segment, Chr 7, ERATO Doi 715, expressed	ncRNA
common_peak1-17023-10-7-0.356415345008769-1.12966497611638	chr6	91204719	91205215	+	0	NA	intron (NM_001081437, intron 5 of 16)	intron (NM_001081437, intron 5 of 16)	42209	NM_007992	14115	Mm.249146	NM_007992	ENSMUSG00000064080	Fbln2	5730577E14Rik|FIBL-2	fibulin 2	protein-coding
unique_peak1-3270-10-0-3.35641534500877-3.31132995230379	chr18	70028787	70029386	+	0	NA	Intergenic	Intergenic	-56127	NM_201362	381175	Mm.266831	NM_201362	ENSMUSG00000038903	Ccdc68	BC046343	coiled-coil domain containing 68	protein-coding
unique_peak1-3240-8-3-1.00522241794757-1.39487600375387	chr18	64089215	64089829	+	0	NA	intron (NM_001014981, intron 25 of 27)	intron (NM_001014981, intron 25 of 27)	221173	NM_001014981	104082	Mm.30850	NM_001014981	ENSMUSG00000040560	Wdr7	AI462727|TRAG|mKIAA0541	WD repeat domain 7	protein-coding
common_peak2-28760-15-15-0.0121647505556561-0.30803596071496	chr5	43948530	43949142	+	0	NA	intron (NM_001135172, intron 1 of 2)	intron (NM_001135172, intron 1 of 2)	42028	NM_001135172	109323	Mm.275553	NM_175425	ENSMUSG00000061535	C1qtnf7	5530401N20Rik|8430425G24Rik|Ctrp7	C1q and tumor necrosis factor related protein 7	protein-coding
unique_peak1-4679-10-1-2.35641534500877-2.57096726280955	chr3	94922144	94922802	+	0	NA	intron (NM_009336, intron 2 of 5)	PB1D9|SINE|Alu	-5963	NM_016712	50874	Mm.71935	NM_016712	ENSMUSG00000005628	Tmod4	MTMOD|Sk-Tmod	tropomodulin 4	protein-coding
common_peak2-24817-18-18-0.0649916377847664-0.323898164595606	chr17	70847750	70848408	+	0	NA	intron (NM_027712, intron 1 of 9)	intron (NM_027712, intron 1 of 9)	-23371	NM_001128180	224997	Mm.311840	NM_027712	ENSMUSG00000003279	Dlgap1	4933422O14Rik|9630002F18|AI845682|AI848168|BB075781|D17Bwg0511e|GKAP/SAPAP|GKPA/SAPAP|Gkap|Sapap1|mKIAA4162	discs, large (Drosophila) homolog-associated protein 1	protein-coding
common_peak2-27910-19-20-0.0103699038829257-0.306326795069978	chr4	6452145	6453105	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-71207	NM_010945	18201	Mm.3059	NM_010945	ENSMUSG00000028245	Nsmaf	AA959567|C630007J05|Fan	neutral sphingomyelinase (N-SMase) activation associated factor	protein-coding
unique_peak2-32522-3-7--1.41398308995928-1.23214870625617	chr1	59488302	59488747	+	0	NA	Intergenic	RLTR23|LTR|ERV1	-50467	NM_008057	14369	Mm.297906	NM_008057	ENSMUSG00000041075	Fzd7	Fz7	frizzled homolog 7 (Drosophila)	protein-coding
unique_peak2-32520-3-7--1.41398308995928-1.23214870625617	chr1	59481392	59481818	+	0	NA	Intergenic	MTE2b|LTR|MaLR	-57386	NM_008057	14369	Mm.297906	NM_008057	ENSMUSG00000041075	Fzd7	Fz7	frizzled homolog 7 (Drosophila)	protein-coding
common_peak1-15158-102-201--0.38712300591224-1.65621167215253	chr3	146498556	146500824	+	0	NA	Intergenic	Intergenic	-15641	NM_027594	70892	Mm.187793	NM_027594	ENSMUSG00000036745	Ttll7	1110049N09Rik|4921517B04Rik|C630030B20|Ttll7s	tubulin tyrosine ligase-like family, member 7	protein-coding
common_peak1-11977-42-73--0.467124037761766-0.920598702816666	chr17	8164756	8166320	+	0	NA	intron (NM_025789, intron 3 of 7)	B1F1|SINE|Alu	27059	NM_025789	66832	Mm.29830	NM_025789	ENSMUSG00000073471	Rsph3a	1700012G05Rik|4930524H12Rik|R74860|Rshl2|Rshl2a	radial spoke 3A homolog (Chlamydomonas)	protein-coding
common_peak2-22212-39-38-0.330359028056905-0.603849233446504	chr12	112576518	112577895	+	0	NA	intron (NM_183016, intron 4 of 36)	intron (NM_183016, intron 4 of 36)	38723	NM_183016	217866	Mm.27397	NM_183016	ENSMUSG00000021279	Cdc42bpb	MRCKb	CDC42 binding protein kinase beta	protein-coding
common_peak1-17370-22-16-0.559821263837065-0.733541631673787	chr7	65978134	65979210	+	0	NA	intron (NM_009728, intron 1 of 20)	intron (NM_009728, intron 1 of 20)	65100	NM_009728	11982	Mm.135129	NM_009728	ENSMUSG00000025324	Atp10a	Atp10c|pfatp	ATPase, class V, type 10A	protein-coding
common_peak1-11254-37-17-1.35606807004351-3.31195702770221	chr15	80161298	80162904	+	0	NA	intron (NM_001044308, intron 4 of 36)	intron (NM_001044308, intron 4 of 36)	44433	NM_001044308	239556	Mm.291058	NM_001044308	ENSMUSG00000022416	Cacna1i	Ca(V)3.3	calcium channel, voltage-dependent, alpha 1I subunit	protein-coding
unique_peak1-6062-10-4-1.03448725012141-1.5150158574804	chr6	116406432	116407075	+	0	NA	intron (NM_009662, intron 1 of 13)	intron (NM_009662, intron 1 of 13)	4443	NM_009662	11689	Mm.41072	NM_009662	ENSMUSG00000025701	Alox5	5-LO|5-LOX|5LO|5LX|AI850497|F730011J02	arachidonate 5-lipoxygenase	protein-coding
common_peak1-9640-45-74--0.368460665151009-0.72320139087996	chr12	55229746	55231045	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	74466	NM_028133	112407	Mm.133037	NM_028133	ENSMUSG00000035105	Egln3	2610021G09Rik|AI505553|AI648162|Hif-p4h-3|Phd3|SM-20	egl-9 family hypoxia-inducible factor 3	protein-coding
common_peak2-29843-26-34--0.201383924786504-0.35535220421655	chr6	97204944	97205698	+	0	NA	Intergenic	Intergenic	-2547	NM_001081157	320502	Mm.68163	NM_001081157	ENSMUSG00000044086	Lmod3	5430424A14Rik	leiomodin 3 (fetal)	protein-coding
unique_peak2-33993-7-18--1.4488366831454-1.38887104242188	chr12	86881499	86882252	+	0	NA	Intergenic	Intergenic	-58180	NM_001205052	81703	Mm.103560	NM_030887	ENSMUSG00000034271	Jdp2	Jundm2|Jundp2|TIF	Jun dimerization protein 2	protein-coding
unique_peak1-3005-7-3-0.799090830298189-1.23214870625617	chr17	84112541	84112969	+	0	NA	intron (NM_001171053, intron 2 of 13)	intron (NM_001171053, intron 2 of 13)	7252	NM_001171052	116871	Mm.277668	NM_054082	ENSMUSG00000055817	Mta3	1110002J22Rik|mKIAA1266	metastasis associated 3	protein-coding
common_peak1-18137-41-29-0.794258109240142-1.7388889233551	chr8	10909682	10911185	+	0	NA	Intergenic	Intergenic	10511	NR_102285	71624	Mm.139075	NR_102285		4833411C07Rik	-	RIKEN cDNA 4833411C07 gene	ncRNA
unique_peak2-36044-6-8--0.60452689106201-1.03789460276074	chr19	45005928	45006381	+	0	NA	intron (NM_001081225, intron 1 of 19)	intron (NM_001081225, intron 1 of 19)	545	NM_001081225	226151	Mm.212609	NM_172638	ENSMUSG00000036097	Fam178a	3632432H19|6030443O07Rik|AU014917	family with sequence similarity 178, member A	protein-coding
unique_peak1-7037-12-5-1.06381348436648-1.78669045979184	chr8	126856486	126857161	+	0	NA	intron (NM_139272, intron 10 of 15)	intron (NM_139272, intron 10 of 15)	101013	NM_171824	209966	Mm.234233	NM_171824	ENSMUSG00000050751	Pgbd5	2900019M05Rik|AI854313	piggyBac transposable element derived 5	protein-coding
common_peak2-24101-13-11-0.193509529916613-0.379391706698377	chr16	32608986	32609453	+	0	NA	intron (NM_011638, intron 1 of 18)	CpG	237	NM_011638	22042	Mm.28683	NM_011638	ENSMUSG00000022797	Tfrc	2610028K12Rik|AI195355|AI426448|AU015758|CD71|E430033M20Rik|Mtvr-1|Mtvr1|TFR|TFR1|TR|Trfr|p90	transferrin receptor	protein-coding
common_peak2-20042-12-16--0.4386868561627-0.368541233333383	chr1	141066331	141067005	+	0	NA	exon (NM_181347, exon 21 of 21)	exon (NM_181347, exon 21 of 21)	192434	NR_108103	78229	Mm.437838	NR_108103		4930596I21Rik	-	RIKEN cDNA 4930596I21 gene	ncRNA
common_peak2-30817-58-79--0.0259781599968658-0.301029995664001	chr7	128523679	128524685	+	0	NA	Intergenic	Intergenic	-11628	NM_001081327	195646	Mm.247449	NM_177575	ENSMUSG00000046321	Hs3st2	6430516N12Rik|A830061E14Rik|AW491345	heparan sulfate (glucosamine) 3-O-sulfotransferase 2	protein-coding
common_peak1-10986-28-12-1.35251940168037-2.51395164919446	chr15	35025208	35026508	+	0	NA	intron (NM_019635, intron 4 of 10)	intron (NM_019635, intron 4 of 10)	59703	NM_019635	56274	Mm.262330	NM_019635	ENSMUSG00000022329	Stk3	0610042I06Rik|MST|Mst2|Mst3|Ste20|mess1	serine/threonine kinase 3	protein-coding
common_peak1-15842-45-53-0.105470523181403-0.349953584539098	chr5	147291759	147292914	+	0	NA	Intergenic	Intergenic	-1183	NM_001243104	623198	Mm.489582	NM_001243104	ENSMUSG00000096344	Gm6408	-	predicted gene 6408	protein-coding
unique_peak1-5972-18-8-1.14299414978604-1.45476480588849	chr6	94754919	94755728	+	0	NA	Intergenic	Intergenic	-105184	NM_008377	16206	Mm.245210	NM_008377	ENSMUSG00000030029	Lrig1	D6Bwg0781e|Img|LIG-1	leucine-rich repeats and immunoglobulin-like domains 1	protein-coding
unique_peak2-36425-9-14--0.717277189204299-0.53895475198017	chr2	129129884	129130637	+	0	NA	intron (NM_010554, intron 5 of 6)	intron (NM_010554, intron 5 of 6)	5448	NM_010554	16175	Mm.15534	NM_010554	ENSMUSG00000027399	Il1a	Il-1a	interleukin 1 alpha	protein-coding
common_peak1-16979-45-72--0.329466533535146-0.629057001794454	chr6	86848680	86849931	+	0	NA	intron (NM_001040106, intron 1 of 20)	intron (NM_001040106, intron 1 of 20)	49794	NM_001040106	269774	Mm.221038	NM_177762	ENSMUSG00000057230	Aak1	5530400K14Rik|9630042K20|AU067724|AU067726|BC028270|C79663|D6Ertd245e|R75501|mKIAA1048	AP2 associated kinase 1	protein-coding
unique_peak1-1695-8-0-3.00522241794757-2.70926996097583	chr13	80932750	80933239	+	0	NA	Intergenic	ORR1B1-int|LTR|MaLR	-89689	NM_001042591	105171	Mm.423137	NM_001042591	ENSMUSG00000074794	Arrdc3	AI450344|mKIAA1376	arrestin domain containing 3	protein-coding
unique_peak1-7307-9-1-2.18961340640422-2.31132995230379	chr9	117251737	117252267	+	0	NA	intron (NM_001172121, intron 2 of 14)	MTE-int|LTR|MaLR	-90401	NM_001172126	207181	Mm.326411	NM_178660	ENSMUSG00000039607	Rbms3	6720477E09Rik|8430436O14Rik	RNA binding motif, single stranded interacting protein	protein-coding
common_peak1-11713-42-42-0.316064573165086-0.62760443475974	chr16	32429984	32431780	+	0	NA	promoter-TSS (NM_001163160)	promoter-TSS (NM_001163160)	-125	NM_009981	13026	Mm.98775	NM_009981	ENSMUSG00000005615	Pcyt1a	CTalpha|Cctalpha|Ctpct|Cttalpha	phosphate cytidylyltransferase 1, choline, alpha isoform	protein-coding
common_peak2-31776-36-74--0.749497604328126-1.85122145394931	chr9	22387568	22389955	+	0	NA	intron (NM_181316, intron 9 of 21)	intron (NM_181316, intron 9 of 21)	108602	NM_178415	319845	Mm.176725	NM_178415	ENSMUSG00000035919	Bbs9	E130103I17Rik	Bardet-Biedl syndrome 9 (human)	protein-coding
unique_peak1-3836-11-4-1.18676548936425-1.68134727924692	chr2	3753230	3753853	+	0	NA	Intergenic	AT_rich|Low_complexity|Low_complexity	122811	NM_025626	66540	Mm.277864	NM_025626	ENSMUSG00000026655	Fam107b	3110001A13Rik|AA589595|AA959793|AI132312	family with sequence similarity 107, member B	protein-coding
unique_peak1-3755-7-0-2.79909083029819-2.40823996531185	chr19	53694066	53694533	+	0	NA	intron (NM_007790, intron 7 of 28)	B1_Mus2|SINE|Alu	19413	NM_007790	13006	Mm.14910	NM_007790	ENSMUSG00000024974	Smc3	Bamacan|Cspg6|HCAP|Mmip1|SMC-3|SmcD	structural maintenance of chromosomes 3	protein-coding
common_peak2-32255-6-6--0.241956811677302-0.947717972411649	chrX	7842122	7842536	+	0	NA	Intergenic	(TATATG)n|Simple_repeat|Simple_repeat	-6178	NM_172479	209837	Mm.6055	NM_172479	ENSMUSG00000031170	Slc38a5	C81234|E330031E14|JM24|SN2	solute carrier family 38, member 5	protein-coding
common_peak2-27454-15-19--0.309763344331706-0.356936432242222	chr3	90432980	90433511	+	0	NA	Intergenic	Intergenic	16429	NM_011313	20200	Mm.100144	NM_011313	ENSMUSG00000001025	S100a6	2A9|5B10|CALCYCLIN|Cacy|PRA	S100 calcium binding protein A6 (calcyclin)	protein-coding
common_peak1-18249-44-39-0.499964739681173-1.03825765497309	chr8	33660004	33661104	+	0	NA	Intergenic	Intergenic	398187	NR_046039	666589	Mm.367675	NR_046039		Gm8179	EG666589	predicted gene 8179	ncRNA
common_peak2-21416-28-28-0.194978124693891-0.390124689062469	chr11	83941957	83942754	+	0	NA	intron (NM_172562, intron 1 of 15)	intron (NM_172562, intron 1 of 15)	715	NM_172562	217031	Mm.45159	NM_172562	ENSMUSG00000018651	Tada2a	AV319371|D030022J10Rik|Tada2l	transcriptional adaptor 2A	protein-coding
common_peak1-8466-15-26--0.742722751607812-0.823046386575433	chr10	80104209	80105109	+	0	NA	TTS (NM_145361)	TTS (NM_145361)	12258	NM_001159591	103236	Mm.29873	NM_134002	ENSMUSG00000003345	Csnk1g2	2810429I12Rik|AI463719	casein kinase 1, gamma 2	protein-coding
common_peak2-30174-58-91--0.227612021166516-0.485119537398548	chr6	149309074	149310248	+	0	NA	Intergenic	PB1D9|SINE|Alu	-47845	NM_001112796	12121	Mm.177181	NM_009753	ENSMUSG00000003452	Bicd1	B830009D06Rik	bicaudal D homolog 1 (Drosophila)	protein-coding
common_peak1-10756-8-4-0.683294323060208-1.21878474469819	chr14	70099440	70099960	+	0	NA	intron (NM_001146012, intron 6 of 7)	intron (NM_001146012, intron 6 of 7)	7645	NR_105915	102465573		NR_105915		Mir6950	mmu-mir-6950	microRNA mir-6950	ncRNA
common_peak1-11558-12-17--0.521149016354673-0.417187467413082	chr16	11175620	11176249	+	0	NA	intron (NR_027502, intron 1 of 22)	CpG	552	NR_027502	106205	Mm.226860	NM_145931	ENSMUSG00000037965	Zc3h7a	A430104C18Rik|AI447294|AW556219|HSPC055|Zc3h7|Zc3hdc7	zinc finger CCCH type containing 7 A	protein-coding
common_peak2-29564-42-90--0.765465312331512-2.27623938954082	chr6	47739763	47741099	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	13220	NR_030485	735289		NR_030485		Mir704	Mirn704|mmu-mir-704	microRNA 704	ncRNA
common_peak1-18981-6-7--0.434601889619698-0.97990265578305	chr9	56872787	56873268	+	0	NA	intron (NM_019651, intron 4 of 12)	intron (NM_019651, intron 4 of 12)	30252	NM_019651	56294	Mm.325643	NM_019651	ENSMUSG00000032290	Ptpn9	MEG2	protein tyrosine phosphatase, non-receptor type 9	protein-coding
unique_peak1-2215-8-0-3.00522241794757-2.70926996097583	chr15	73414944	73415382	+	0	NA	intron (NM_001033219, intron 6 of 7)	intron (NM_001033219, intron 6 of 7)	11793	NM_001168255	106068	Mm.212813	NM_001033219	ENSMUSG00000079020	Slc45a4	9330175B01Rik|AW552276	solute carrier family 45, member 4	protein-coding
common_peak2-28613-49-83--0.386033599753577-0.835791152470286	chr5	24601032	24602917	+	0	NA	intron (NM_145401, intron 1 of 15)	MER5A|DNA|MER1_type	4486	NM_145401	108099	Mm.33649	NM_145401	ENSMUSG00000028944	Prkag2	2410051C13Rik|AAKG|AAKG2|AI854673|H91620p|WPWS	protein kinase, AMP-activated, gamma 2 non-catalytic subunit	protein-coding
common_peak1-17935-39-56--0.217128767245588-0.402440571782907	chr7	127344886	127346128	+	0	NA	promoter-TSS (NM_016669)	promoter-TSS (NM_016669)	-5	NM_016669	12971	Mm.9114	NM_016669	ENSMUSG00000030905	Crym	-	crystallin, mu	protein-coding
common_peak1-12508-24-14-0.886319307159198-1.33403699391683	chr17	94864305	94865140	+	0	NA	Intergenic	Lx9|LINE|L1	284510	NM_176917	76781	Mm.139146	NM_176917	ENSMUSG00000055660	Mettl4	2410198H06Rik|A730091E08Rik|AV296509|HsT661	methyltransferase like 4	protein-coding
common_peak2-20602-39-69--0.513521770025813-1.04068780415875	chr10	79908531	79909168	+	0	NA	Intergenic	MTD|LTR|MaLR	-12451	NM_001164148	21423	Mm.3406	NM_011548	ENSMUSG00000020167	Tcf3	A1|AA408400|ALF2|AW209082|E12|E12/E47|E2A|E47|ME2|Pan1|Pan2|TCF-3|Tcfe2a|VDIR|bHLHb21	transcription factor 3	protein-coding
common_peak2-19920-15-18--0.235762762887929-0.326591483156968	chr1	125680083	125680985	+	0	NA	intron (NM_199021, intron 3 of 25)	L1_Mus1|LINE|L1	261602	NM_199021	269109	Mm.483255	NM_199021	ENSMUSG00000036815	Dpp10	6430601K09Rik|DPP X|Dprp3	dipeptidylpeptidase 10	protein-coding
common_peak1-15945-33-36-0.121884196896579-0.346766333527252	chr5	29707050	29708766	+	0	NA	Intergenic	RLTR25B|LTR|ERVK	-2978	NM_020295	56873	Mm.41572	NM_020295	ENSMUSG00000010721	Lmbr1	1110048D14Rik|AU017641	limb region 1	protein-coding
unique_peak1-5573-17-0-4.21829633820504-6.02059991327962	chr5	148574698	148575354	+	0	NA	Intergenic	B1_Mur2|SINE|Alu	-37462	NM_010228	14254	Mm.389712	NM_010228	ENSMUSG00000029648	Flt1	AI323757|Flt-1|VEGFR-1|VEGFR1|sFlt1	FMS-like tyrosine kinase 1	protein-coding
common_peak1-13091-30-47--0.415287091229283-0.618527319161325	chr19	7216899	7217923	+	0	NA	intron (NM_134147, intron 3 of 10)	B1F2|SINE|Alu	-37192	NM_201411	396184	Mm.386930	NM_201411	ENSMUSG00000047787	Flrt1	AW742165|D630040I23Rik	fibronectin leucine rich transmembrane protein 1	protein-coding
common_peak1-8176-10-11--0.228547155712387-0.31137425193576	chr10	19185490	19186169	+	0	NA	Intergenic	Intergenic	109484	NM_053008	94222	Mm.156946	NM_053008	ENSMUSG00000045591	Olig3	Bhlhb7|bHLHe20	oligodendrocyte transcription factor 3	protein-coding
common_peak1-16822-16-7-1.11826364226806-1.23399803405144	chr6	48510533	48511316	+	0	NA	intron (NM_177736, intron 2 of 2)	MTA_Mm|LTR|MaLR	6126	NM_177736	243371	Mm.290764	NM_177736	ENSMUSG00000073096	Lrrc61	BC027309	leucine rich repeat containing 61	protein-coding
unique_peak1-4138-21-3-2.56948926526624-4.33845181153635	chr2	92735597	92736368	+	0	NA	Intergenic	Intergenic	-19276	NM_030725	80976	Mm.33490	NM_030725	ENSMUSG00000027220	Syt13	5730409J20Rik|AI549909|mKIAA1427	synaptotagmin XIII	protein-coding
common_peak1-9953-105-150-0.0829291711980877-0.371089646173629	chr12	111536986	111538952	+	0	NA	Intergenic	RMER19B|LTR|ERVK	20529	NM_172119	107585	Mm.154427	NM_172119	ENSMUSG00000075707	Dio3	-	deiodinase, iodothyronine type III	protein-coding
common_peak2-22670-29-21-0.652858461977813-1.06916698217164	chr13	97008361	97009216	+	0	NA	Intergenic	Intergenic	-106256	NM_029210	75209	Mm.40436	NM_029210	ENSMUSG00000051111	Sv2c	4930527L09Rik|AI841971	synaptic vesicle glycoprotein 2c	protein-coding
common_peak2-22126-24-19-0.471281807880354-0.677583764578261	chr12	84417118	84417861	+	0	NA	intron (NM_001267625, intron 5 of 10)	intron (NM_001267625, intron 5 of 10)	-377347	NR_046045	74283	Mm.398247	NR_046045		1700085C21Rik	-	RIKEN cDNA 1700085C21 gene	ncRNA
common_peak1-18509-10-12--0.344024373132323-0.340565874754526	chr8	87504080	87504707	+	0	NA	Intergenic	Intergenic	-1746	NM_008416	16477	Mm.1167	NM_008416	ENSMUSG00000052837	Junb	-	jun B proto-oncogene	protein-coding
unique_peak2-39727-6-12--1.13504160776079-1.45089835786865	chr9	121710383	121710911	+	0	NA	intron (NM_028384, intron 13 of 15)	intron (NM_028384, intron 13 of 15)	-9022	NM_029095	74770	Mm.44195	NM_029095	ENSMUSG00000032523	Hhatl	1110011D13Rik|Gup1	hedgehog acyltransferase-like	protein-coding
unique_peak1-4427-9-3-1.18961340640422-1.57096726280955	chr2	168078119	168078588	+	0	NA	Intergenic	Intergenic	16478	NM_001081134	241794	Mm.425102	NM_001081134	ENSMUSG00000074575	Kcng1	AW536275|OTTMUSG00000016048	potassium voltage-gated channel, subfamily G, member 1	protein-coding
common_peak2-29167-27-51--0.708893767245856-1.25391625579201	chr5	134176009	134176817	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-399205	NM_030719	80909	Mm.45218	NM_030719		Gatsl2	7530428J21Rik|AW742413|Gats|Gatsl1	GATS protein-like 2	protein-coding
common_peak1-17170-86-118-0.0808180307244095-0.357996857961114	chr6	120363077	120365057	+	0	NA	intron (NM_145997, intron 19 of 27)	intron (NM_145997, intron 19 of 27)	-49148	NM_008359	16172	Mm.4481	NM_008359	ENSMUSG00000002897	Il17ra	AW538159|Cdw217|Il17r|VDw217	interleukin 17 receptor A	protein-coding
common_peak1-13475-99-164--0.146964470963165-0.457186059703072	chr2	173275044	173277261	+	0	NA	Intergenic	(GGGGA)n|Simple_repeat|Simple_repeat	-71941	NM_028158	72221	Mm.46132	NM_028158	ENSMUSG00000027518	1700021F07Rik	-	RIKEN cDNA 1700021F07 gene	protein-coding
common_peak1-7968-11-14--0.398197011356905-0.379391706698377	chr1	156616059	156616593	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-43276	NM_009782	12290	Mm.267517	NM_009782	ENSMUSG00000004110	Cacna1e	A430040I15|BII|Cach6|Cacnl1a6|Cav2.3|Cchra1|alpha1E	calcium channel, voltage-dependent, R type, alpha 1E subunit	protein-coding
common_peak1-12289-9-11--0.395349094316936-0.344532117358383	chr17	45736191	45736719	+	0	NA	promoter-TSS (NM_001199115)	promoter-TSS (NM_001199115)	97	NM_001199115	63959	Mm.29744	NM_022880	ENSMUSG00000023942	Slc29a1	1200014D21Rik|AA407560|ENT1	solute carrier family 29 (nucleoside transporters), member 1	protein-coding
unique_peak2-35628-12-17--0.521149016354673-0.417187467413082	chr17	87458747	87459614	+	0	NA	Intergenic	RMER19B|LTR|ERVK	34279	NM_019936	56724	Mm.109329	NM_019936	ENSMUSG00000024146	Cript	1200020A08Rik|AA589469	cysteine-rich PDZ-binding protein	protein-coding
common_peak2-20125-11-36--1.70075978137734-3.34305003325519	chr1	164224280	164225217	+	0	NA	intron (NM_172646, intron 11 of 19)	intron (NM_172646, intron 11 of 19)	71249	NR_029796	387210		NR_029796	miRBase:MI0000698	Mir214	Mirn214|mmu-mir-214	microRNA 214	ncRNA
common_peak2-30425-12-17--0.521149016354673-0.417187467413082	chr7	43312469	43313174	+	0	NA	Intergenic	Intergenic	3207083	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak2-23114-2-11--2.50241675698448-2.32232533660526	chr14	79518610	79519178	+	0	NA	intron (NM_027906, intron 37 of 44)	intron (NM_027906, intron 37 of 44)	128280	NM_001033215	105590	Mm.486536	NM_001033215	ENSMUSG00000071262	Zfp957	AU017455	zinc finger protein 957	protein-coding
common_peak2-32004-9-5-0.604650905683064-1.21398586181642	chr9	71689944	71690276	+	0	NA	Intergenic	Intergenic	53793	NM_001253864	21406	Mm.171615	NM_011544	ENSMUSG00000032228	Tcf12	A130037E08Rik|ALF1|HEB|HEBAlt|HTF-4|HTF4|ME1|REB|bHLHb20	transcription factor 12	protein-coding
common_peak2-30609-18-15-0.312919151228352-0.456667090758524	chr7	89338092	89338930	+	0	NA	Intergenic	Intergenic	-69907	NM_001277955	20408	Mm.736	NM_017400		Sh3gl3	EEN-B2|SH3P13|Sh3d2c|Sh3d2c2	SH3-domain GRB2-like 3	protein-coding
common_peak1-12875-18-22--0.210642804828661-0.321718508207525	chr18	76929863	76930575	+	0	NA	Intergenic	Intergenic	-164925	NM_001109743	664805	Mm.329543	NM_001109743	ENSMUSG00000091519	Skor2	Corl2|EG664805|Fussel18|Gm7348	SKI family transcriptional corepressor 2	protein-coding
common_peak1-12218-21-18-0.32156175182265-0.48779450977742	chr17	34627559	34628357	+	0	NA	intron (NR_004051, intron 6 of 8)	intron (NR_004051, intron 6 of 8)	6416	NR_004051	81497	Mm.484231	NR_004051		Btnl5-ps	Btnl5|ENSMUSG00000073420|Gm15330|NG12|OTTMUSG00000020237	butyrophilin-like 5, pseudogene	pseudo
common_peak2-26932-16-37--1.12966387117552-1.94848218498813	chr2	163602240	163602877	+	0	NA	Intergenic	Intergenic	-26583	NM_001272052	11486	Mm.388	NM_007398	ENSMUSG00000017697	Ada	-	adenosine deaminase	protein-coding
common_peak2-21289-11-18--0.739233929191972-0.671582559449692	chr11	70655310	70656126	+	0	NA	Intergenic	Lx8|LINE|L1	-2545	NM_001291143	54189	Mm.7087	NM_019400	ENSMUSG00000020817	Rabep1	Rab5ep|rabaptin-5|rabaptin-5alpha	rabaptin, RAB GTPase binding effector protein 1	protein-coding
common_peak1-13121-28-20-0.660641697042702-1.00055860626307	chr19	8981665	8982992	+	0	NA	intron (NM_001293621, intron 5 of 23)	intron (NM_001293621, intron 5 of 23)	9781	NM_008060	14376	Mm.3196	NM_008060	ENSMUSG00000071650	Ganab	AU042638|G2an|GluII|mKIAA0088	alpha glucosidase 2 alpha neutral subunit	protein-coding
common_peak2-26414-16-12-0.417823924126969-0.489164546851866	chr2	59675995	59676604	+	0	NA	intron (NM_001290659, intron 22 of 25)	intron (NM_001290659, intron 22 of 25)	44364	NM_001159636	72137	Mm.288734	NM_028118	ENSMUSG00000026988	Wdsub1	1700048E19Rik|2610014F08Rik	WD repeat, SAM and U-box domain containing 1	protein-coding
common_peak2-22207-13-10-0.319040412000471-0.446472590016315	chr12	111698129	111698493	+	0	NA	intron (NM_001135001, intron 2 of 13)	intron (NM_001135001, intron 2 of 13)	12922	NM_001135001	26931	Mm.240396	NM_012023	ENSMUSG00000017843	Ppp2r5c	2610043M05Rik|2700063L20Rik|AI060890|AW545884|C85228|D12Bwg0916e|mKIAA0044	protein phosphatase 2, regulatory subunit B', gamma	protein-coding
unique_peak1-1104-8-4-0.683294323060208-1.21878474469819	chr11	90224242	90224761	+	0	NA	intron (NM_172563, intron 2 of 3)	L1MC|LINE|L1	27730	NM_172563	217082	Mm.158903	NM_172563	ENSMUSG00000003949	Hlf	E230015K02Rik	hepatic leukemia factor	protein-coding
common_peak1-11556-39-61--0.338435063467721-0.585862008351123	chr16	11066213	11067370	+	0	NA	intron (NM_009223, intron 1 of 1)	CpG	400	NM_009223	20621	Mm.325800	NM_009223	ENSMUSG00000037972	Snn	2810407J07Rik|AI848521|AW547286	stannin	protein-coding
unique_peak1-1078-22-8-1.47735910364509-2.29727994934156	chr11	86630005	86631091	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-9386	NM_026191	67487	Mm.260627	NM_026191	ENSMUSG00000018425	Dhx40	2410016C14Rik|ARG147|DDX40|PAD	DEAH (Asp-Glu-Ala-His) box polypeptide 40	protein-coding
common_peak2-29869-11-8-0.338768582809301-1.14218153353838	chr6	108476841	108477391	+	0	NA	intron (NM_010585, intron 60 of 61)	intron (NM_010585, intron 60 of 61)	37379	NR_106121	102465766		NR_106121		Mir7661	mmu-mir-7661	microRNA mir-7661	ncRNA
common_peak1-12982-27-4-2.66961785600787-5.68425908349381	chr19	4133573	4134515	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	5565	NM_144532	73660	Mm.379226	NM_144532	ENSMUSG00000024842	Cabp4	2410038D05Rik	calcium binding protein 4	protein-coding
unique_peak2-34236-6-7--0.434601889619698-0.97990265578305	chr13	53001092	53001443	+	0	NA	intron (NM_016709, intron 3 of 9)	BC1_Mm|scRNA|scRNA	23779	NM_016709	11992	Mm.252034	NM_016709	ENSMUSG00000021460	Auh	C77140|W91705	AU RNA binding protein/enoyl-coenzyme A hydratase	protein-coding
common_peak2-25315-8-12--0.695217300193522-0.475924844171029	chr18	75363506	75364107	+	0	NA	intron (NM_027727, intron 14 of 16)	MLT1J2|LTR|MaLR	93165	NR_045394	100503117	Mm.250517	NR_045393		2010010A06Rik	5033420E22Rik	RIKEN cDNA 2010010A06 gene	ncRNA
common_peak2-22515-26-38--0.357503126703786-0.505877949819268	chr13	54604969	54606248	+	0	NA	intron (NM_176987, intron 1 of 9)	CpG	442	NM_176987	319719	Mm.376151	NM_176987	ENSMUSG00000043183	Simc1	4732471D19Rik	SUMO-interacting motifs containing 1	protein-coding
common_peak1-8348-39-48-0.00105140280394522-0.303268666669768	chr10	56228486	56229652	+	0	NA	Intergenic	L1Md_T|LINE|L1	131963	NM_010288	14609	Mm.378921	NM_010288	ENSMUSG00000050953	Gja1	AU042049|AW546267|Cnx43|Cx43|Cx43alpha1|Gja-1|Npm1|connexin43	gap junction protein, alpha 1	protein-coding
unique_peak2-37962-35-76--0.835416282232397-2.31448767722894	chr6	47676372	47678051	+	0	NA	Intergenic	Intergenic	17019	NR_002841	19799		NR_002841		Rn4.5s	-	4.5S RNA	rRNA
common_peak2-20320-13-16--0.30899081061257-0.330004445983672	chr10	80150396	80151127	+	0	NA	intron (NM_172457, intron 3 of 3)	intron (NM_172457, intron 3 of 3)	13804	NM_172457	208228	Mm.49309	NM_172457	ENSMUSG00000003348	Mob3a	5330417K06Rik|A630029F06|AV218468|Mobkl2a	MOB kinase activator 3A	protein-coding
common_peak1-10594-49-71--0.163641178417128-0.379881757498728	chr14	31018280	31019967	+	0	NA	intron (NM_001083616, intron 3 of 46)	intron (NM_001083616, intron 3 of 46)	147549	NM_001083616	12289	Mm.9772	NM_028981	ENSMUSG00000015968	Cacna1d	8430418G19Rik|C79217|Cacnl1a2|Cchl1a|Cchl1a2|D-LTCC	calcium channel, voltage-dependent, L type, alpha 1D subunit	protein-coding
unique_peak1-3585-13-3-1.77847203063777-2.58603100924543	chr19	29641394	29642131	+	0	NA	exon (NM_001081319, exon 5 of 26)	exon (NM_001081319, exon 5 of 26)	44990	NM_001081319	226089	Mm.353838	NM_177641	ENSMUSG00000038658	Ric1	C030046E11Rik|C130057E09Rik|Kiaa1432	RAB6A GEF complex partner 1	protein-coding
unique_peak2-33950-6-7--0.434601889619698-0.97990265578305	chr12	77059953	77060355	+	0	NA	intron (NM_001005510, intron 45 of 115)	MTE2a|LTR|MaLR	50064	NR_039560	100628610		NR_039560		Mir5101	mmu-mir-5101|mu-mir-5101	microRNA 5101	ncRNA
unique_peak1-5584-6-1-1.5653981103803-1.56314192529759	chr5	150709461	150709889	+	0	NA	Intergenic	Intergenic	59353	NR_045758	70969	Mm.78499	NR_045758		4930500F04Rik	4931407C17Rik	RIKEN cDNA 4930500F04 gene	ncRNA
common_peak1-10965-13-8-0.608547029195456-0.660903317613904	chr15	27597815	27598461	+	0	NA	intron (NM_001242423, intron 1 of 7)	MIR|SINE|MIR	13159	NM_001242424	223433	Mm.266485	NM_198301	ENSMUSG00000056069	Fam105a	9830126M18	family with sequence similarity 105, member A	protein-coding
common_peak1-15243-45-83--0.531959397433889-1.26866979374127	chr4	11006699	11008435	+	0	NA	Intergenic	B3A|SINE|B2	-4215	NM_001085493	76947	Mm.275265	NM_001085493	ENSMUSG00000050323	Ndufaf6	2310030N02Rik	NADH dehydrogenase (ubiquinone) complex I, assembly factor 6	protein-coding
unique_peak1-4354-8-5-0.420259917226415-1.10484139239135	chr2	155728765	155729216	+	0	NA	intron (NR_024487, intron 5 of 9)	MIRb|SINE|MIR	27056	NM_018888	56046	Mm.158827	NM_018888	ENSMUSG00000005882	Uqcc1	2310079L17Rik|2410003P15Rik|3110038N19Rik|Bfzb|Bfzp|Cbp3|Uqcc	ubiquinol-cytochrome c reductase complex assembly factor 1	protein-coding
common_peak2-28913-17-30--0.735899972181837-0.841847921495509	chr5	92434499	92435280	+	0	NA	TTS (NM_001276315)	TTS (NM_001276315)	18390	NM_001177577	381651	Mm.332494	NM_001177577	ENSMUSG00000096035	Gm1045	-	predicted gene 1045	protein-coding
common_peak1-17184-13-16--0.30899081061257-0.330004445983672	chr6	122874489	122875033	+	0	NA	exon (NM_199311, exon 2 of 6)	exon (NM_199311, exon 2 of 6)	2895	NM_199311	269799	Mm.297275	NM_199311	ENSMUSG00000049037	Clec4a1	BC049354|Dcir4	C-type lectin domain family 4, member a1	protein-coding
common_peak1-12024-13-15--0.221527969362231-0.308519316180257	chr17	16951560	16952035	+	0	NA	Intergenic	Intergenic	-249270	NM_001005358	449000	Mm.483718	NM_001005358	ENSMUSG00000096696	Zfp960	-	zinc finger protein 960	protein-coding
common_peak2-28665-13-46--1.77611682103987-4.20640746933199	chr5	31613764	31614393	+	0	NA	intron (NM_144909, intron 16 of 18)	(TTCC)n|Simple_repeat|Simple_repeat	14124	NM_144909	231103	Mm.100043	NM_144909	ENSMUSG00000059434	Gckr	GKRP	glucokinase regulatory protein	protein-coding
unique_peak1-3235-13-3-1.77847203063777-2.58603100924543	chr18	61958967	61959722	+	0	NA	3' UTR (NM_198649, exon 23 of 23)	3' UTR (NM_198649, exon 23 of 23)	-13028	NM_178928	106877	Mm.26632	NM_178928	ENSMUSG00000033032	Afap1l1	AI173486	actin filament associated protein 1-like 1	protein-coding
common_peak1-13745-26-27-0.120544170100858-0.335332249061431	chr2	32714390	32715522	+	0	NA	Intergenic	Intergenic	-12199	NM_001113569	20910	Mm.278865	NM_009295	ENSMUSG00000026797	Stxbp1	AI317162|AI326233|MMS10-G|Ms10g|Munc-18a|Munc18-1|N-sec1|Rb-sec1|Sxtbp1|Unc18-1|Unc18h|nsec1	syntaxin binding protein 1	protein-coding
common_peak1-16739-35-45--0.092191697594509-0.310901174692144	chr6	31125314	31126706	+	0	NA	intron (NR_110470, intron 2 of 2)	intron (NR_110470, intron 2 of 2)	42464	NR_110470	232685	Mm.443019	NM_144555		Lincpint	MNCb-1768|Pint|linc-Pint	long intergenic non-protein coding RNA, Trp53 induced transcript	ncRNA
unique_peak2-38749-6-32--2.47899600897815-4.54209996799533	chr7	116432552	116433462	+	0	NA	intron (NM_054103, intron 13 of 13)	L1MEf|LINE|L1	-119185	NM_057173	109594	Mm.360145	NM_057173	ENSMUSG00000036111	Lmo1	Rbtn-1|Rbtn1|Ttg1	LIM domain only 1	protein-coding
unique_peak2-35368-7-10--0.660340788339108-1.12966497611638	chr17	27181382	27182027	+	0	NA	Intergenic	B2_Mm1a|SINE|B2	-12545	NM_080553	16440	Mm.458106	NM_080553	ENSMUSG00000042644	Itpr3	Ip3r3|Itpr-3	inositol 1,4,5-triphosphate receptor 3	protein-coding
unique_peak2-32742-4-7--1.02346051385325-1.09384600808989	chr1	166043249	166043668	+	0	NA	Intergenic	Intergenic	-1937	NM_011347	20344	Mm.3337	NM_011347	ENSMUSG00000026580	Selp	CD62P|GMP-140|Grmp|LECAM3|PADGEM	selectin, platelet	protein-coding
common_peak2-27367-23-21-0.262335885871783-0.416752705545949	chr3	84581896	84582895	+	0	NA	Intergenic	Intergenic	-37104	NM_001177773	50754	Mm.196475	NM_080428	ENSMUSG00000028086	Fbxw7	1110001A17Rik|AGO|Cdc4|Fbw7|Fbwd6|Fbx30|Fbxo30|Fbxw6|SEL-10	F-box and WD-40 domain protein 7	protein-coding
unique_peak1-1130-8-1-2.00522241794757-2.05605744720049	chr11	95366453	95366936	+	0	NA	Intergenic	MLT1J|LTR|MaLR	9185	NM_130858	104079	Mm.22970	NM_130858	ENSMUSG00000046719	Nxph3	-	neurexophilin 3	protein-coding
unique_peak2-34251-6-11--1.01956439034085-1.32595962126035	chr13	59585584	59586228	+	0	NA	intron (NM_001284219, intron 16 of 24)	intron (NM_001284219, intron 16 of 24)	59906	NM_001284221	67269	Mm.153008	NM_023328	ENSMUSG00000021557	Agtpbp1	1700020N17Rik|2310001G17Rik|2900054O13Rik|4930445M19Rik|5730402G09Rik|CCP1|Nna1|nmf243|pcd	ATP/GTP binding protein 1	protein-coding
common_peak2-23173-218-267-0.525171296625437-5.03651617925973	chr15	101973953	101978806	+	0	NA	intron (NM_008344, intron 1 of 3)	RMER12|LTR|ERVK	1762	NM_008344	16012	Mm.358609	NM_008344	ENSMUSG00000023046	Igfbp6	IGFBP-6	insulin-like growth factor binding protein 6	protein-coding
common_peak1-8086-61-74-0.15393063925346-0.413122813965767	chr1	180640419	180642133	+	0	NA	intron (NM_001161665, intron 3 of 14)	intron (NM_001161665, intron 3 of 14)	182020	NM_001161665	269152	Mm.129727	NM_177724	ENSMUSG00000026494	Kif26b	4832420M10|BC056349|D230039L06Rik	kinesin family member 26B	protein-coding
unique_peak1-3568-31-5-2.64027617009197-6.28613342899827	chr19	28558468	28559739	+	0	NA	intron (NM_175459, intron 4 of 10)	L1M5|LINE|L1	-193611	NR_045330	320176	Mm.406716	NR_045330	ENSMUSG00000097735	D930032P07Rik	-	RIKEN cDNA D930032P07 gene	ncRNA
unique_peak1-2410-10-1-2.35641534500877-2.57096726280955	chr15	99521486	99521996	+	0	NA	promoter-TSS (NM_001289791)	promoter-TSS (NM_001289791)	-445	NM_001289791	11419	Mm.440107	NM_009597	ENSMUSG00000023017	Asic1	AI843610|ASIC|ASIC1a|Accn2|B530003N02Rik|BNaC2	acid-sensing (proton-gated) ion channel 1	protein-coding
unique_peak1-7145-12-5-1.06381348436648-1.78669045979184	chr9	57339046	57339591	+	0	NA	Intergenic	Intergenic	-12591	NM_133982	102614	Mm.274421	NM_133982	ENSMUSG00000062309	Rpp25	AI851155	ribonuclease P/MRP 25 subunit	protein-coding
unique_peak1-2205-60-9-3.03236376673317-14.9429113802855	chr15	67143102	67145124	+	0	NA	intron (NR_045140, intron 5 of 8)	intron (NR_045140, intron 5 of 8)	85782	NR_045140	69334	Mm.63770	NR_045140		1700012I11Rik	-	RIKEN cDNA 1700012I11 gene	ncRNA
unique_peak1-20-12-2-2.06381348436648-2.79529063155376	chr1	3549731	3550583	+	0	NA	intron (NM_001011874, intron 1 of 2)	intron (NM_001011874, intron 1 of 2)	111422	NM_001011874	497097	Mm.454496	NM_001011874	ENSMUSG00000051951	Xkr4	AY534250|Gm210|XRG4|mKIAA1889	X Kell blood group precursor related family member 4	protein-coding
unique_peak2-38736-6-6--0.241956811677302-0.947717972411649	chr7	112823314	112823703	+	0	NA	Intergenic	B3|SINE|B2	34454	NM_019502	14356	Mm.220330	NM_019502		Timm10b	Fxc1|Tim10b|Tim9b	translocase of inner mitochondrial membrane 10B	protein-coding
unique_peak1-3366-26-10-1.46846747352116-2.57346781069461	chr19	55852293	55853299	+	0	NA	intron (NM_001142920, intron 4 of 11)	intron (NM_001142920, intron 4 of 11)	36496	NM_001142923	21416	Mm.139815	NM_009333	ENSMUSG00000024985	Tcf7l2	TCF4B|TCF4E|Tcf-4|Tcf4|mTcf-4B|mTcf-4E	transcription factor 7 like 2, T cell specific, HMG box	protein-coding
unique_peak2-39005-4-6--0.830815435910851-0.989110657569874	chr8	46941567	46942037	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-29037	NM_016798	53318	Mm.282900	NM_016798	ENSMUSG00000031636	Pdlim3	AI463105|ALP|Actn2lp	PDZ and LIM domain 3	protein-coding
common_peak2-27381-56-53-0.480708323275775-1.12620916894576	chr3	87157317	87158720	+	0	NA	Intergenic	Lx8|LINE|L1	-3785	NM_009690	11801	Mm.6676	NM_009690	ENSMUSG00000015854	Cd5l	1/6|AAC-11|AI047839|Api6|CT2|Pdp|Sp-alpha	CD5 antigen-like	protein-coding
common_peak1-16485-15-29--0.894725845052863-1.1282783422172	chr5	138085017	138085739	+	0	NA	exon (NM_010571, exon 2 of 2)	exon (NM_010571, exon 2 of 2)	1564	NM_010571	16369	Mm.24486	NM_010571	ENSMUSG00000047182	Irs3	AA408304	insulin receptor substrate 3	protein-coding
common_peak2-25474-38-59--0.335437936309988-0.547023400307267	chr19	4614539	4615909	+	0	NA	5' UTR (NM_153388, exon 1 of 3)	5' UTR (NM_153388, exon 1 of 3)	443	NM_153388	225875	Mm.329675	NM_153388	ENSMUSG00000045045	Lrfn4	BC023156|Salm3	leucine rich repeat and fibronectin type III domain containing 4	protein-coding
common_peak2-25972-6-9--0.75652998450706-1.11707584880836	chr19	53461807	53462196	+	0	NA	intron (NM_172429, intron 2 of 5)	B1_Mur1|SINE|Alu	3062	NM_172429	76479	Mm.313687	NM_172429	ENSMUSG00000025024	Smndc1	2410004J23Rik|4933440I19Rik	survival motor neuron domain containing 1	protein-coding
common_peak2-23094-8-9--0.316705676939792-1.03275496310833	chr14	76616648	76617168	+	0	NA	Intergenic	Intergenic	106210	NM_013745	27275	Mm.21138	NM_013745	ENSMUSG00000022009	Nufip1	Nufip	nuclear fragile X mental retardation protein interacting protein 1	protein-coding
unique_peak1-5253-9-4-0.867685311516858-1.36011389749466	chr5	53809400	53809968	+	0	NA	Intergenic	MER57C2|LTR|ERV1	-137334	NM_001080928	19664	Mm.209292	NM_009035	ENSMUSG00000039191	Rbpj	AI843960|CBF1|Igkjrb|Igkrsbp|RBP-J|RBP-J kappa|RBPjk|Rbpsuh	recombination signal binding protein for immunoglobulin kappa J region	protein-coding
common_peak2-25638-10-8-0.186490343566457-1.078512453669	chr19	9135103	9135638	+	0	NA	intron (NM_001286518, intron 6 of 6)	B1_Mm|SINE|Alu	27076	NM_011681	22287	Mm.2258	NM_011681	ENSMUSG00000024653	Scgb1a1	CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg	secretoglobin, family 1A, member 1 (uteroglobin)	protein-coding
common_peak1-17194-48-96--0.628985690952313-1.79914952665944	chr6	124755683	124756961	+	0	NA	Intergenic	Intergenic	-2637	NM_013539	14794	Mm.261906	NM_013539	ENSMUSG00000038451	Spsb2	AI461677|C9|Grcc9|SSB2	splA/ryanodine receptor domain and SOCS box containing 2	protein-coding
common_peak1-13828-40-68--0.449548774027071-0.830196118985429	chr2	58566413	58567839	+	0	NA	intron (NM_001289660, intron 1 of 7)	L1MA4A|LINE|L1	-40469	NM_001289659	76654	Mm.200370	NM_029692	ENSMUSG00000026839	Upp2	1700124F02Rik|AI266885|UDRPASE2|UP2|UPASE2	uridine phosphorylase 2	protein-coding
common_peak1-17406-15-15-0.0121647505556561-0.30803596071496	chr7	4788900	4789730	+	0	NA	intron (NM_001290291, intron 1 of 4)	intron (NM_001290291, intron 1 of 4)	6983	NM_001290291	232813	Mm.44666	NM_172737	ENSMUSG00000053550	Shisa7	-	shisa homolog 7 (Xenopus laevis)	protein-coding
common_peak1-17486-13-7-0.778472030637769-0.817533494790411	chr7	24598952	24599663	+	0	NA	Intergenic	Intergenic	-5088	NM_001166727	622222	Mm.480269	NM_001166727	ENSMUSG00000095632	Vmn1r175	EG622222|Gm6299	vomeronasal 1 receptor 175	protein-coding
common_peak2-28178-15-19--0.309763344331706-0.356936432242222	chr4	109665531	109666314	+	0	NA	Intergenic	Intergenic	15292	NM_172296	242620	Mm.32825	NM_172296	ENSMUSG00000047143	Dmrta2	Dmrt5	doublesex and mab-3 related transcription factor like family A2	protein-coding
common_peak2-31461-7-8--0.370834171144123-1.00793137938329	chr8	105601314	105601724	+	0	NA	Intergenic	Intergenic	269915	NR_036588	69794	Mm.396139	NR_036588		1600027J07Rik	-	RIKEN cDNA 1600027J07 gene	ncRNA
unique_peak2-32521-12-26--1.10611151707583-1.26025077975594	chr1	59482157	59483350	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	-56238	NM_008057	14369	Mm.297906	NM_008057	ENSMUSG00000041075	Fzd7	Fz7	frizzled homolog 7 (Drosophila)	protein-coding
common_peak2-22703-40-33-0.571512841500759-1.1451285992054	chr13	100669267	100670201	+	0	NA	intron (NM_013732, intron 2 of 2)	intron (NM_013732, intron 2 of 2)	904	NM_013732	27220	Mm.75498	NM_013732	ENSMUSG00000021647	Cartpt	Cart	CART prepropeptide	protein-coding
unique_peak1-4421-11-3-1.50869358425161-1.95434855131066	chr2	167833176	167833749	+	0	NA	intron (NM_001080708, intron 1 of 21)	intron (NM_001080708, intron 1 of 21)	2631	NM_001080708	69553	Mm.68454	NM_001080708	ENSMUSG00000074577	Fam65c	2310033K02Rik|Gm124	family with sequence similarity 65, member C	protein-coding
common_peak1-15625-6-2-0.980435609659146-1.26211192963361	chr4	133613819	133614133	+	0	NA	Intergenic	Intergenic	-10391	NM_001162970	230806	Mm.240080	NM_001162970	ENSMUSG00000012123	Aim1l	-	absent in melanoma 1-like	protein-coding
unique_peak1-6232-17-15-0.218296338205038-0.403453972741633	chr7	7277583	7278375	+	0	NA	exon (NM_009490, exon 3 of 6)	exon (NM_009490, exon 3 of 6)	12225	NM_009490	22306	Mm.458977	NM_009490	ENSMUSG00000070847	Vmn2r30	ENSMUSG00000070847|V2r15	vomeronasal 2, receptor 30	protein-coding
common_peak2-29777-21-20-0.177171842487475-0.380101753845079	chr6	88465249	88465877	+	0	NA	exon (NM_016906, exon 3 of 12)	exon (NM_016906, exon 3 of 12)	3231	NM_016906	53421	Mm.28375	NM_016906	ENSMUSG00000030082	Sec61a1	AA408394|AA410007|Sec61a	Sec61 alpha 1 subunit (S. cerevisiae)	protein-coding
unique_peak2-36071-6-9--0.75652998450706-1.11707584880836	chr19	53653822	53654293	+	0	NA	Intergenic	Intergenic	-20829	NM_007790	13006	Mm.14910	NM_007790	ENSMUSG00000024974	Smc3	Bamacan|Cspg6|HCAP|Mmip1|SMC-3|SmcD	structural maintenance of chromosomes 3	protein-coding
unique_peak1-1456-7-1-1.79909083029819-1.80617997398389	chr12	108142416	108142649	+	0	NA	Intergenic	Intergenic	-187998	NR_015512	71033	Mm.159404	NR_015512	ENSMUSG00000085820	4933406K04Rik	4930426M03Rik|4930485I22Rik|4933427G14Rik	RIKEN cDNA 4933406K04 gene	ncRNA
unique_peak1-2681-8-2-1.42025991722641-1.65811743852845	chr16	58712388	58712848	+	0	NA	Intergenic	Intergenic	6219	NM_001162955	71223	Mm.359970	NM_001162955	ENSMUSG00000047293	Gpr15	4933439K08Rik	G protein-coupled receptor 15	protein-coding
common_peak2-32053-23-32--0.322626614849373-0.436052471002795	chr9	85842349	85843063	+	0	NA	Intergenic	Intergenic	106247	NM_001164792	21983	Mm.20864	NM_011627	ENSMUSG00000035274	Tpbg	5T4|AW495680|WAIF1	trophoblast glycoprotein	protein-coding
common_peak1-10332-20-25--0.212364933549899-0.342639663781856	chr13	74349611	74350460	+	0	NA	3' UTR (NM_009644, exon 11 of 11)	3' UTR (NM_009644, exon 11 of 11)	-3887	NM_177333	211446	Mm.261859	NM_177333	ENSMUSG00000034152	Exoc3	2810050O03Rik|E430013E20Rik|Sec6|Sec6l1	exocyst complex component 3	protein-coding
common_peak1-15401-34-30-0.427872216614391-0.737357778720995	chr4	83308156	83309815	+	0	NA	intron (NM_001081012, intron 15 of 25)	intron (NM_001081012, intron 15 of 25)	137536	NM_001081012	320226	Mm.180032	NM_029117	ENSMUSG00000052407	Ccdc171	4930418J05Rik|4930473A06Rik|A330015D16Rik	coiled-coil domain containing 171	protein-coding
unique_peak1-3702-23-7-1.72176750450908-2.82905316394614	chr19	43938057	43939003	+	0	NA	intron (NM_028029, intron 10 of 15)	Lx7|LINE|L1	25237	NR_033472	100038628	Mm.212585	NR_033472	ENSMUSG00000074828	Gm10768	ENSMUSG00000074828	predicted gene 10768	ncRNA
unique_peak2-33387-4-14--1.93035110946177-2.23384849113406	chr11	49243959	49244542	+	0	NA	exon (NM_147066, exon 1 of 1)	exon (NM_147066, exon 1 of 1)	321	NM_147066	259069	Mm.377820	NM_147066	ENSMUSG00000046575	Olfr1389	MOR256-1	olfactory receptor 1389	protein-coding
common_peak1-8707-49-25-1.30584410488409-4.14100757013079	chr11	94403086	94404906	+	0	NA	intron (NM_001013381, intron 8 of 8)	intron (NM_001013381, intron 8 of 8)	6525	NM_001013381	237926	Mm.342275	NM_001013381	ENSMUSG00000039096	Rsad1	B430319G23|BC056485	radical S-adenosyl methionine domain containing 1	protein-coding
unique_peak1-3829-8-4-0.683294323060208-1.21878474469819	chr2	169590325	169590834	+	0	NA	intron (NM_080455, intron 1 of 1)	intron (NM_080455, intron 1 of 1)	131433	NM_080455	228911	Mm.315789	NM_080455	ENSMUSG00000047907	Tshz2	2900073F20Rik|B830045G17|Mtsh2|Sdccag33l|Tsh2|Zfp218|mKIAA4248|teashirt2	teashirt zinc finger family member 2	protein-coding
common_peak1-13359-14-11-0.314253659636488-0.435191258261915	chr19	45560037	45560674	+	0	NA	intron (NM_001286466, intron 4 of 13)	intron (NM_001286466, intron 4 of 13)	74678	NM_020032	56626	Mm.46509	NM_020032	ENSMUSG00000025218	Poll	1110003P06Rik|AV007317	polymerase (DNA directed), lambda	protein-coding
unique_peak2-38338-8-12--0.695217300193522-0.475924844171029	chr7	27508292	27508902	+	0	NA	Intergenic	L1VL2|LINE|L1	-33609	NM_007814	13090	Mm.14098	NM_007814	ENSMUSG00000066704	Cyp2b19	-	cytochrome P450, family 2, subfamily b, polypeptide 19	protein-coding
common_peak2-27610-6-14--1.34149248522822-1.01572999746118	chr3	104233639	104234089	+	0	NA	Intergenic	RCHARR1|DNA|MER1_type	81915	NM_001025067	269473	Mm.34855	NM_001025067	ENSMUSG00000032913	Lrig2	4632419I10Rik|BB096938	leucine-rich repeats and immunoglobulin-like domains 2	protein-coding
common_peak1-16152-59-107--0.42952350129089-1.15052193417603	chr5	76303685	76305051	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	70085	NM_010612	16542	Mm.285	NM_010612	ENSMUSG00000062960	Kdr	6130401C07|Flk-1|Flk1|Krd-1|Ly73|VEGFR-2|VEGFR2|sVEGFR-2	kinase insert domain protein receptor	protein-coding
unique_peak1-4956-12-4-1.32684789020028-2.04196296489515	chr4	97920273	97921014	+	0	NA	Intergenic	B4|SINE|B4	129313	NM_053157	94043	Mm.331719	NM_053157	ENSMUSG00000028563	Tm2d1	2310026L18Rik|AA990549|Bbp	TM2 domain containing 1	protein-coding
common_peak2-20561-8-5-0.420259917226415-1.10484139239135	chr10	74680898	74681124	+	0	NA	intron (NM_001145826, intron 1 of 18)	L1M4|LINE|L1	5876	NM_001145826	74392	Mm.27716	NM_153406	ENSMUSG00000033444	Specc1l	4930470P14Rik|4932439K10Rik|9530057A13Rik|AI317249|Cytsa|mKIAA0376	sperm antigen with calponin homology and coiled-coil domains 1-like	protein-coding
common_peak2-25633-7-6--0.00826409175941478-0.97990265578305	chr19	9082723	9083076	+	0	NA	exon (NM_009643, exon 5 of 5)	exon (NM_009643, exon 5 of 5)	19125	NM_001286518	66395	Mm.203866	NM_009643	ENSMUSG00000069833	Ahnak	DY6	AHNAK nucleoprotein (desmoyokin)	protein-coding
common_peak1-12710-19-8-1.23276232521937-1.61268301619756	chr18	46859249	46860125	+	0	NA	Intergenic	Intergenic	28309	NM_033037	12583	Mm.241056	NM_033037	ENSMUSG00000033022	Cdo1	1300002L19Rik|Cdo|D18Ucla3	cysteine dioxygenase 1, cytosolic	protein-coding
unique_peak2-37797-5-6--0.511735258063458-0.947717972411649	chr5	122502390	122502902	+	0	NA	Intergenic	Intergenic	-4812	NM_007804	13048	Mm.156172	NM_007804	ENSMUSG00000042589	Cux2	1700051K22Rik|Cutl2|Cux-2|ENSMUSG00000072641	cut-like homeobox 2	protein-coding
common_peak2-22051-78-71-0.636896092718223-2.31273107961858	chr12	69537703	69539528	+	0	NA	Intergenic	L1Md_T|LINE|L1	721558	NM_009093	20090	Mm.379006	NM_009093	ENSMUSG00000034892	Rps29	-	ribosomal protein S29	protein-coding
common_peak2-21329-19-8-1.23276232521937-1.61268301619756	chr11	75605725	75606197	+	0	NA	intron (NM_007873, intron 1 of 8)	intron (NM_007873, intron 1 of 8)	3598	NM_007873	13447	Mm.5137	NM_007873	ENSMUSG00000020848	Doc2b	-	double C2, beta	protein-coding
common_peak2-30625-58-94--0.273905673440451-0.583801854567669	chr7	92740675	92741548	+	0	NA	Intergenic	Lx2|LINE|L1	-22861	NM_001105184	233445	Mm.389930	NM_001105184	ENSMUSG00000091205	Vmn2r71	EG233445	vomeronasal 2, receptor 71	protein-coding
common_peak2-20160-36-85--0.946943668534344-3.01746543769812	chr1	170214897	170215496	+	0	NA	intron (NM_001291508, intron 2 of 7)	intron (NM_001291508, intron 2 of 7)	147104	NM_001291508	18514	Mm.43358	NM_008783	ENSMUSG00000052534	Pbx1	2310056B04Rik|D230003C07Rik|Pbx-1	pre B cell leukemia homeobox 1	protein-coding
common_peak2-25569-44-72--0.367931724311482-0.680633324097791	chr19	6909113	6910555	+	0	NA	intron (NM_019924, intron 8 of 17)	intron (NM_019924, intron 8 of 17)	5283	NM_019924	56613	Mm.20914	NM_019924	ENSMUSG00000024952	Rps6ka4	1110069D02Rik|90kDa|AI848992|Msk2|mMSK2	ribosomal protein S6 kinase, polypeptide 4	protein-coding
common_peak1-11222-11-13--0.298661337805991-0.337263207250336	chr15	79299926	79300640	+	0	NA	Intergenic	B3A|SINE|B2	-27796	NM_013767	27373	Mm.30199	NM_013767	ENSMUSG00000022433	Csnk1e	AI426939|AI551861|AW457082|CK1epsilon|CKIe|KC1epsilon|tau	casein kinase 1, epsilon	protein-coding
unique_peak2-36956-0-4--3.16205902536157-1.10720996964787	chr3	108458294	108458625	+	0	NA	intron (NM_001177771, intron 2 of 12)	intron (NM_001177771, intron 2 of 12)	1551	NM_001177770	229725	Mm.214545	NM_145543	ENSMUSG00000027884	Clcc1	Mclc	chloride channel CLIC-like 1	protein-coding
common_peak2-23677-15-7-1.01216475055566-1.08658567012551	chr15	85684042	85684429	+	0	NA	intron (NM_001033337, intron 12 of 13)	intron (NM_001033337, intron 12 of 13)	-5902	NM_001168672	29870	Mm.20858	NM_013882	ENSMUSG00000022385	Gtse1	B99|Gtse-1	G two S phase expressed protein 1	protein-coding
common_peak1-9064-69-33-1.50767960600839-7.4501118718888	chr11	69072980	69073935	+	0	NA	Intergenic	Intergenic	-22933	NM_008192	14919	Mm.291816	NM_008192	ENSMUSG00000020890	Gucy2e	GC-E|GC1|ROS-GC1	guanylate cyclase 2e	protein-coding
common_peak2-25420-19-20-0.0103699038829257-0.306326795069978	chr19	58523211	58524036	+	0	NA	intron (NR_104342, intron 4 of 11)	intron (NR_104342, intron 4 of 11)	5461	NM_001285457	14585	Mm.88367	NM_010279	ENSMUSG00000025089	Gfra1	AU042498	glial cell line derived neurotrophic factor family receptor alpha 1	protein-coding
unique_peak1-456-6-3-0.565398110380302-1.08602067057793	chr1	168471694	168472157	+	0	NA	Intergenic	L1Md_A|LINE|L1	-44206	NM_001164306	226601	Mm.475593	NM_001164306	ENSMUSG00000086056	Gm4846	EG226601|Fmo13	predicted gene 4846	protein-coding
unique_peak1-4257-21-10-1.11005764662894-1.59083646988122	chr2	129819220	129820221	+	0	NA	Intergenic	Intergenic	-18356	NM_009374	21818	Mm.2961	NM_009374	ENSMUSG00000027401	Tgm3	AI893889|TG E|TG(E)|TGE|TGase E|TGase-3	transglutaminase 3, E polypeptide	protein-coding
common_peak1-7800-13-20--0.613845392140992-0.532159081577619	chr1	111864213	111864969	+	0	NA	Intergenic	Intergenic	-15723	NM_172853	241201	Mm.213407	NM_172853	ENSMUSG00000026312	Cdh7	9330156F07Rik|CDH7L1	cadherin 7, type 2	protein-coding
unique_peak1-4750-8-2-1.42025991722641-1.65811743852845	chr3	115641209	115641716	+	0	NA	TTS (NM_023214)	TTS (NM_023214)	50361	NM_027193	69740	Mm.5915	NM_027193	ENSMUSG00000033554	Dph5	2410012M04Rik|AU045680|C80186	DPH5 homolog (S. cerevisiae)	protein-coding
unique_peak1-2042-10-0-3.35641534500877-3.31132995230379	chr15	25941838	25942459	+	0	NA	Intergenic	Intergenic	28027	NM_144523	52521	Mm.29145	NM_144523	ENSMUSG00000052253	Zfp622	1110033B05Rik|D15Ertd806e|ZPR9|Znf622	zinc finger protein 622	protein-coding
unique_peak2-39533-4-16--2.11092335510359-1.97518968347063	chr9	66919027	66919791	+	0	NA	Intergenic	Intergenic	-22389	NM_001164251	22003	Mm.121878	NM_024427	ENSMUSG00000032366	Tpm1	AA986836|AI854628|TM2|Tm3|Tmpa|Tpm-1|alpha-TM	tropomyosin 1, alpha	protein-coding
common_peak2-30389-10-15--0.643584654991231-0.519648556297791	chr7	30169283	30169756	+	0	NA	intron (NM_001081028, intron 8 of 22)	PB1|SINE|Alu	80495	NM_013874	29861	Mm.101885	NM_013874	ENSMUSG00000030584	Dpf1	Neud4	D4, zinc and double PHD fingers family 1	protein-coding
common_peak2-29561-15-7-1.01216475055566-1.08658567012551	chr6	43637357	43637684	+	0	NA	Intergenic	Kanga1|DNA|Tc2	-21346	NM_013861	29807	Mm.320979	NM_013861	ENSMUSG00000029735	Tpk1	-	thiamine pyrophosphokinase	protein-coding
common_peak1-12190-58-42-0.869685180188399-2.79764007137193	chr17	31992704	31995100	+	0	NA	Intergenic	Intergenic	-1165	NM_010831	17691	Mm.290941	NM_010831	ENSMUSG00000024042	Sik1	Msk|Sik|Snf1lk	salt inducible kinase 1	protein-coding
unique_peak1-3694-8-4-0.683294323060208-1.21878474469819	chr19	43610951	43611530	+	0	NA	Intergenic	Intergenic	-12145	NM_010324	14718	Mm.19039	NM_010324	ENSMUSG00000025190	Got1	AI789014|Got-1|cAspAT|cCAT	glutamate oxaloacetate transaminase 1, soluble	protein-coding
common_peak1-16123-40-28-0.800994687623526-1.77636329975051	chr5	66542895	66544416	+	0	NA	promoter-TSS (NM_001127382)	promoter-TSS (NM_001127382)	-462	NM_001127382	245945	Mm.36863	NM_139065	ENSMUSG00000070780	Rbm47	9530077J19Rik	RNA binding motif protein 47	protein-coding
unique_peak1-2676-10-6-0.549060422951165-1.21398586181642	chr16	58388933	58389630	+	0	NA	Intergenic	Intergenic	-19367	NM_028523	73379	Mm.373589	NM_028523	ENSMUSG00000035107	Dcbld2	1700055P21Rik|AW146002|CLCP1|Esdn	discoidin, CUB and LCCL domain containing 2	protein-coding
common_peak1-16518-36-79--0.842607008719608-2.35156382971582	chr5	140610630	140612061	+	0	NA	intron (NM_010752, intron 12 of 17)	intron (NM_010752, intron 12 of 17)	186161	NM_010752	17120	Mm.27250	NM_010752	ENSMUSG00000029554	Mad1l1	AI173502|AW550425|Mad1	MAD1 mitotic arrest deficient 1-like 1	protein-coding
common_peak1-19166-23-12-1.02132778636799-1.44787515926925	chr9	96196196	96196905	+	0	NA	intron (NM_178667, intron 8 of 13)	B2_Mm2|SINE|B2	36883	NM_001184710	211586	Mm.17977	NM_178667	ENSMUSG00000032411	Tfdp2	1110029I05Rik|A330080J22Rik|DP-3|DP3	transcription factor Dp 2	protein-coding
common_peak1-13879-108-171--0.0560877932940285-0.324297008126841	chr2	72978373	72981196	+	0	NA	intron (NM_030091, intron 7 of 7)	intron (NM_030091, intron 7 of 7)	72720	NM_030091	67059	Mm.22661	NM_025942	ENSMUSG00000027108	Ola1	2510025G09Rik|2810405J23Rik|2810409H07Rik|Gtpbp9|PTD004	Obg-like ATPase 1	protein-coding
unique_peak2-33013-7-13--1.00826409175941-0.697979855752659	chr10	66353459	66354061	+	0	NA	Intergenic	B3A|SINE|B2	-114063	NR_110511	102634101	Mm.445258	NR_110511		LOC102634101	-	uncharacterized LOC102634101	ncRNA
common_peak1-18020-21-28--0.288491729861336-0.367910579842127	chr7	141476419	141477335	+	0	NA	intron (NM_001081331, intron 5 of 7)	L1MA9|LINE|L1	-60097	NM_007400	11489	Mm.439714	NM_007400	ENSMUSG00000054555	Adam12	Mltna|mKIAA4001	a disintegrin and metallopeptidase domain 12 (meltrin alpha)	protein-coding
unique_peak1-2334-7-2-1.21412832957703-1.45399745587252	chr15	84237155	84237651	+	0	NA	intron (NM_001163145, intron 3 of 4)	intron (NM_001163145, intron 3 of 4)	40124	NM_001163145	72301	Mm.275387	NM_001163145	ENSMUSG00000062760	1810041L15Rik	Kiaa1644	RIKEN cDNA 1810041L15 gene	protein-coding
common_peak2-27135-57-101--0.406392301892566-1.00585340319754	chr3	27453328	27455459	+	0	NA	intron (NM_173182, intron 4 of 25)	ID_B1|SINE|B4	29524	NR_037275	100526525		NR_037275		Mir3092	mmu-mir-3092	microRNA 3092	ncRNA
common_peak1-14086-36-17-1.30939608472544-3.14879976126019	chr2	122147496	122149048	+	0	NA	intron (NM_001099297, intron 8 of 32)	(CAAG)n|Simple_repeat|Simple_repeat	6864	NM_001099297	99439	Mm.108582	NM_001099297	ENSMUSG00000033268	Duox1	9930101G15Rik|AW987690|Duox2|LNOX1|LNOX2|NOXEF1|NOXEF2|P138-TOX|THOX1|THOX2	dual oxidase 1	protein-coding
unique_peak2-38818-2-6--1.72480917832092-1.26211192963361	chr7	139384802	139385097	+	0	NA	Intergenic	Intergenic	-38525	NM_018867	55987	Mm.471654	NM_018867	ENSMUSG00000030862	Cpxm2	4632435C11Rik|CPX-2|Cpx2	carboxypeptidase X 2 (M14 family)	protein-coding
unique_peak1-627-9-8-0.0196884049619079-1.03275496310833	chr10	27985334	27985983	+	0	NA	intron (NM_008983, intron 3 of 31)	intron (NM_008983, intron 3 of 31)	191032	NM_008983	19272	Mm.332303	NM_008983	ENSMUSG00000019889	Ptprk	AI853699|PTPk|RPTPkappa	protein tyrosine phosphatase, receptor type, K	protein-coding
unique_peak1-2985-23-1-3.72176750450908-6.57132529354008	chr17	78851497	78852344	+	0	NA	Intergenic	Lx9|LINE|L1	-34428	NM_001285940	225020	Mm.236835	NM_199448	ENSMUSG00000056121	Fez2	9030616F16|D17Ertd315e	fasciculation and elongation protein zeta 2 (zygin II)	protein-coding
common_peak1-13243-39-32-0.5713671275607-1.08158034290997	chr19	29805725	29806728	+	0	NA	intron (NM_172836, intron 5 of 7)	intron (NM_172836, intron 5 of 7)	33795	NM_029993	77836	Mm.138437	NM_029993		Mlana	A930034P04Rik|Mart1	melan-A	protein-coding
unique_peak2-39760-5-7--0.704380336005853-1.01466476204226	chrX	136740861	136741364	+	0	NA	Intergenic	Intergenic	-104375	NR_037208	100499512		NR_037208		Mir3475	mmu-mir-3475	microRNA 3475	ncRNA
common_peak1-14742-90-64-1.0319372129137-5.66187917122561	chr3	87157351	87159820	+	0	NA	Intergenic	B1F|SINE|Alu	-3218	NM_009690	11801	Mm.6676	NM_009690	ENSMUSG00000015854	Cd5l	1/6|AAC-11|AI047839|Api6|CT2|Pdp|Sp-alpha	CD5 antigen-like	protein-coding
common_peak2-31052-9-10--0.269818212233077-1.05503135781948	chr8	18898605	18899066	+	0	NA	Intergenic	Intergenic	52036	NM_001286469	319581	Mm.111354	NM_176951	ENSMUSG00000039814	Xkr5	5430438H03Rik|XRG5	X Kell blood group precursor-related family, member 5	protein-coding
common_peak1-16147-14-17--0.270708841084668-0.328191099940267	chr5	74194761	74195355	+	0	NA	Intergenic	(CCCTG)n|Simple_repeat|Simple_repeat	152439	NM_178387	73472	Mm.87067	NM_178387	ENSMUSG00000029155	Spata18	1700067I02Rik	spermatogenesis associated 18	protein-coding
common_peak2-19690-15-11-0.4272022498345-0.503257505534083	chr1	59236733	59237278	+	0	NA	exon (NM_028717, exon 23 of 34)	exon (NM_028717, exon 23 of 34)	-16772	NM_001164682	227157	Mm.474049	NM_145143	ENSMUSG00000079550	Mpp4	Dlg6	membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)	protein-coding
common_peak1-10748-10-13--0.450939577048835-0.386243247519795	chr14	69269431	69269940	+	0	NA	intron (NR_102399, intron 1 of 21)	intron (NR_102399, intron 1 of 21)	4214	NM_010082	13522	Mm.117450	NM_010082	ENSMUSG00000014725	Adam28	C130072N01Rik|D430033C21Rik|Dtgn1|MDC-L|MDC-Lm|MDC-Ls|MDCL|TECADAM|eMDCII	a disintegrin and metallopeptidase domain 28	protein-coding
unique_peak1-1603-8-2-1.42025991722641-1.65811743852845	chr13	37452581	37453094	+	0	NA	intron (NM_010745, intron 1 of 4)	intron (NM_010745, intron 1 of 4)	15623	NM_010745	17084	Mm.2639	NM_010745	ENSMUSG00000021423	Ly86	MD-1|MD1	lymphocyte antigen 86	protein-coding
unique_peak2-35863-4-7--1.02346051385325-1.09384600808989	chr18	76124860	76125300	+	0	NA	intron (NM_145356, intron 2 of 4)	L1MEc|LINE|L1	133045	NR_045365	73009	Mm.443541	NR_045365		2900057B20Rik	-	RIKEN cDNA 2900057B20 gene	ncRNA
common_peak1-9270-93-170--0.306782651379629-1.02427853571067	chr11	87442592	87443635	+	0	NA	intron (NM_001045527, intron 2 of 5)	intron (NM_001045527, intron 2 of 5)	12447	NM_001045527	327992	Mm.390371	NM_001045527	ENSMUSG00000070345	Hsf5	Gm739|MLZ-220	heat shock transcription factor family member 5	protein-coding
common_peak1-8494-33-39-0.00940946763816619-0.303778768325576	chr10	81105278	81106388	+	0	NA	exon (NM_027480, exon 17 of 20)	exon (NM_027480, exon 17 of 20)	-5981	NM_001142963	100233208	Mm.327168	NM_001142963		Gm10778	ENSMUSG00000074860	predicted gene 10778	protein-coding
common_peak1-15577-12-10-0.189344366450341-0.386243247519795	chr4	127243779	127244425	+	0	NA	Intergenic	HAL1|LINE|L1	-208694	NM_010291	14622	Mm.26859	NM_010291	ENSMUSG00000042357	Gjb5	Cnx31.1|Cx31.1|Gjb-5	gap junction protein, beta 5	protein-coding
unique_peak2-39139-5-12--1.40482005414695-1.62698961692433	chr8	85132757	85133246	+	0	NA	Intergenic	L1MC|LINE|L1	165024	NM_145600	30932	Mm.269248	NM_145600	ENSMUSG00000031711	Zfp330	BC008086|Noa36|Znf330	zinc finger protein 330	protein-coding
common_peak1-18043-19-13-0.595332404604082-0.713635438203849	chr7	144678407	144679075	+	0	NA	Intergenic	MTE2a|LTR|MaLR	49384	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
unique_peak2-35978-11-21--0.950738034385684-0.991115276827166	chr19	24343178	24343872	+	0	NA	intron (NM_008044, intron 3 of 4)	ID_B1|SINE|B4	11551	NM_008044	14297	Mm.7319	NM_008044	ENSMUSG00000059363	Fxn	FA|FARR|Frda|X25	frataxin	protein-coding
unique_peak1-5835-25-7-1.86184990534511-3.43644803111449	chr6	72618549	72619525	+	0	NA	intron (NM_009332, intron 3 of 11)	intron (NM_009332, intron 3 of 11)	39212	NR_040421	100038714	Mm.321330	NR_040421		Gm15401	ENSMUSG00000072999|OTTMUSG00000021199	predicted gene 15401	ncRNA
unique_peak1-44-19-2-2.81772482594053-4.27364484827118	chr1	21009992	21010885	+	0	NA	intron (NM_177409, intron 2 of 10)	L1Md_F2|LINE|L1	58868	NM_177409	170829	Mm.185680	NM_177409		Tram2	C330003D03Rik	translocating chain-associating membrane protein 2	protein-coding
common_peak1-12640-40-88--0.816757748215299-2.46569628784776	chr18	35021961	35023489	+	0	NA	exon (NM_007913, exon 2 of 2)	exon (NM_007913, exon 2 of 2)	1864	NM_007913	13653	Mm.181959	NM_007913		Egr1	A530045N19Rik|ETR103|Egr-1|Krox-1|Krox-24|Krox24|NGF1-A|NGFI-A|NGFIA|TIS8|Zenk|Zfp-6|Zif268|egr	early growth response 1	protein-coding
common_peak1-9905-16-14-0.211373046659543-0.364171515310935	chr12	86832999	86833821	+	0	NA	Intergenic	Intergenic	18559	NM_010234	14281	Mm.246513	NM_010234	ENSMUSG00000021250	Fos	D12Rfj1|c-fos|cFos	FBJ osteosarcoma oncogene	protein-coding
common_peak2-21916-5-10--1.16381195464315-1.33892459842472	chr12	14150188	14150617	+	0	NA	Intergenic	Intergenic	8442	NM_029007	105005	Mm.227253	NM_029007	ENSMUSG00000020607	Fam84a	2310003N02Rik|4731402F03Rik|AW125753|Nse1	family with sequence similarity 84, member A	protein-coding
unique_peak2-34722-2-8--2.08737925770563-1.65811743852845	chr15	36826775	36827305	+	0	NA	Intergenic	RLTR33|LTR|ERVK	-100356	NM_001253806	22631	Mm.3360	NM_011740	ENSMUSG00000022285	Ywhaz	1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	protein-coding
common_peak1-11087-18-10-0.853487532591054-1.03889213727317	chr15	59480919	59481605	+	0	NA	intron (NM_144549, intron 1 of 2)	intron (NM_144549, intron 1 of 2)	1053	NM_144549	211770	Mm.40298	NM_144549	ENSMUSG00000032501	Trib1	A530090O15Rik|TRB-1|Trb1	tribbles homolog 1 (Drosophila)	protein-coding
unique_peak1-2793-6-0-2.5653981103803-2.10720996964787	chr17	13731887	13732263	+	0	NA	intron (NR_045437, intron 2 of 3)	B3|SINE|B2	14885	NR_045436	72578	Mm.46549	NR_045436	ENSMUSG00000038347	2700054A10Rik	-	RIKEN cDNA 2700054A10 gene	ncRNA
common_peak2-30948-19-25--0.297752391479405-0.376654945067947	chr8	25099377	25100310	+	0	NA	intron (NM_177086, intron 5 of 6)	LTR16D|LTR|ERVL	319710	NM_177086	320158	Mm.121274	NM_177086	ENSMUSG00000037492	Zmat4	9630048M01Rik	zinc finger, matrin type 4	protein-coding
common_peak1-13562-19-12-0.702247608520594-0.840839978588874	chr2	6255907	6256789	+	0	NA	intron (NM_001080548, intron 1 of 14)	intron (NM_001080548, intron 1 of 14)	12545	NM_001080548	98910	Mm.40673	NM_181399	ENSMUSG00000039046	Usp6nl	AI316785|RNTRE|TRE2NL|mKIAA0019	USP6 N-terminal like	protein-coding
unique_peak1-4538-19-7-1.40268732666169-1.89173646618542	chr3	37723102	37724154	+	0	NA	Intergenic	MTEb|LTR|MaLR	-74107	NR_040559	626410	Mm.389417	NR_040559		Gm20755	-	predicted gene, 20755	ncRNA
unique_peak1-5890-11-2-1.92373108353046-2.32232533660526	chr6	86826688	86827435	+	0	NA	intron (NM_001040106, intron 1 of 20)	MLT1C|LTR|MaLR	27550	NM_001040106	269774	Mm.221038	NM_177762	ENSMUSG00000057230	Aak1	5530400K14Rik|9630042K20|AU067724|AU067726|BC028270|C79663|D6Ertd245e|R75501|mKIAA1048	AP2 associated kinase 1	protein-coding
common_peak2-21875-27-52--0.736374503667963-1.34506277748691	chr12	73907958	73909017	+	0	NA	Intergenic	Intergenic	46289	NM_008910	19042	Mm.261045	NM_008910	ENSMUSG00000021096	Ppm1a	2310003C21Rik|2900017D14Rik|AI427932|AU017636|MMPa-2|MPPa-1	protein phosphatase 1A, magnesium dependent, alpha isoform	protein-coding
common_peak1-17150-15-11-0.4272022498345-0.503257505534083	chr6	117907898	117908538	+	0	NA	Intergenic	Intergenic	-20865	NM_001173372	108017	Mm.250392	NM_033648		Fxyd4	0610008I02Rik|AI267073|Chif	FXYD domain-containing ion transport regulator 4	protein-coding
unique_peak2-38451-8-12--0.695217300193522-0.475924844171029	chr7	28382396	28382939	+	0	NA	intron (NM_001110208, intron 1 of 13)	intron (NM_001110208, intron 1 of 13)	6088	NM_001110208	11652	Mm.177194	NM_007434	ENSMUSG00000004056	Akt2	2410016A19Rik|AW554154|PKB|PKBbeta	thymoma viral proto-oncogene 2	protein-coding
unique_peak2-37953-2-11--2.50241675698448-2.32232533660526	chr5	151113067	151113507	+	0	NA	intron (NM_172887, intron 2 of 60)	MER2|DNA|MER2_type	50782	NM_172887	320365	Mm.216590	NM_172887	ENSMUSG00000056602	Fry	13CDNA73|9330186A19Rik|AF346502|AI462658|C87180|D930046M03|cg003|mKIAA4143	furry homolog (Drosophila)	protein-coding
common_peak1-7967-62-65-0.366357339443631-0.881817354409502	chr1	156558603	156559612	+	0	NA	intron (NM_009782, intron 1 of 46)	intron (NM_009782, intron 1 of 46)	13943	NM_009782	12290	Mm.267517	NM_009782	ENSMUSG00000004110	Cacna1e	A430040I15|BII|Cach6|Cacnl1a6|Cav2.3|Cchra1|alpha1E	calcium channel, voltage-dependent, R type, alpha 1E subunit	protein-coding
common_peak2-20852-12-23--0.936186515633517-0.912223620338476	chr11	70237381	70238385	+	0	NA	Intergenic	Intergenic	-8199	NM_001271360	216869	Mm.203747	NM_145429	ENSMUSG00000060216	Arrb2	AI326910|AW122872	arrestin, beta 2	protein-coding
unique_peak1-6090-12-6-0.841421063030034-1.58711810488664	chr6	124790347	124791018	+	0	NA	promoter-TSS (NM_013530)	promoter-TSS (NM_013530)	-389	NM_013530	14695	Mm.68889	NM_013530	ENSMUSG00000023439	Gnb3	Gnb-3	guanine nucleotide binding protein (G protein), beta 3	protein-coding
unique_peak1-3739-10-1-2.35641534500877-2.57096726280955	chr19	47258822	47259384	+	0	NA	intron (NM_021360, intron 1 of 5)	intron (NM_021360, intron 1 of 5)	5793	NM_021360	18011	Mm.313651	NM_021360	ENSMUSG00000006435	Neurl1a	2410129E16Rik|AI450910|AI481072|Neu1|Neur1|Neurl|Neurl1|Nlz|Rnf67	neuralized homolog 1A (Drosophila)	protein-coding
unique_peak2-36797-4-7--1.02346051385325-1.09384600808989	chr3	82349893	82350220	+	0	NA	intron (NM_008731, intron 1 of 1)	intron (NM_008731, intron 1 of 1)	1951	NM_008731	18167	Mm.1433	NM_008731	ENSMUSG00000028004	Npy2r	NPY2-R	neuropeptide Y receptor Y2	protein-coding
unique_peak1-2882-9-1-2.18961340640422-2.31132995230379	chr17	40869010	40869405	+	0	NA	TTS (NM_001038500)	TTS (NM_001038500)	5138	NM_001038500	619517	Mm.391018	NM_001038500	ENSMUSG00000073396	Esp1	EG619517|Gm6084	exocrine gland secreted peptide 1	protein-coding
common_peak2-20541-20-42--0.938189970110905-1.68120055799038	chr10	67536717	67538058	+	0	NA	Intergenic	Intergenic	95041	NM_001081346	170799	Mm.209844	NM_133244	ENSMUSG00000037846	Rtkn2	B130039D23Rik|Mbf|Plekhk1	rhotekin 2	protein-coding
unique_peak2-34991-4-6--0.830815435910851-0.989110657569874	chr15	99530847	99531249	+	0	NA	3' UTR (NM_009597, exon 12 of 12)	3' UTR (NM_009597, exon 12 of 12)	-1670	NM_031842	83797	Mm.273756	NM_031842	ENSMUSG00000023018	Smarcd1	AA407987|Baf60a|D15Kz1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	protein-coding
common_peak1-17285-9-10--0.269818212233077-1.05503135781948	chr6	135351849	135352360	+	0	NA	Intergenic	Intergenic	34593	NM_001288627	13730	Mm.182785	NM_010128	ENSMUSG00000030208	Emp1	I-8-09|TMP	epithelial membrane protein 1	protein-coding
unique_peak2-33217-2-6--1.72480917832092-1.26211192963361	chr10	117867808	117868139	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-10130	NM_008337	15978	Mm.240327	NM_008337	ENSMUSG00000055170	Ifng	IFN-g|Ifg	interferon gamma	protein-coding
unique_peak1-6782-7-6--0.00826409175941478-0.97990265578305	chr8	65645048	65645529	+	0	NA	intron (NM_023689, intron 5 of 11)	intron (NM_023689, intron 5 of 11)	215146	NM_023689	72902	Mm.334552	NM_023689	ENSMUSG00000054162	Spock3	2900045C01Rik|AI428471|mKIAA4039	sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	protein-coding
unique_peak2-35521-3-6--1.22133801201688-1.08602067057793	chr17	50600459	50600907	+	0	NA	Intergenic	Intergenic	-48189	NM_013880	224860	Mm.217362	NM_013880	ENSMUSG00000038910	Plcl2	PLC-L2|PRIP-2|Plce2|mKIAA1092	phospholipase C-like 2	protein-coding
common_peak2-24130-18-10-0.853487532591054-1.03889213727317	chr16	34958320	34958879	+	0	NA	intron (NR_045722, intron 1 of 2)	intron (NR_045722, intron 1 of 2)	351	NR_045722	278725	Mm.436927	NR_045722		E130310I04Rik	A930019C19Rik	RIKEN cDNA E130310I04 gene	ncRNA
common_peak2-19958-10-10--0.103016273628528-0.301029995663987	chr1	132391326	132391784	+	0	NA	Intergenic	L1Md_T|LINE|L1	-32238	NM_010016	13136	Mm.101591	NM_010016	ENSMUSG00000026399	Cd55	Daf|Daf-GPI|Daf1|GPI-DAF	CD55 antigen	protein-coding
unique_peak1-6228-10-3-1.35641534500877-1.75805390616669	chr7	4657162	4657732	+	0	NA	TTS (NM_177887)	TTS (NM_177887)	14917	NM_001168572	381979	Mm.297064	NM_001003920	ENSMUSG00000035390	Brsk1	Gm1100|SAD-B|SADB	BR serine/threonine kinase 1	protein-coding
unique_peak1-7285-15-2-2.4272022498345-3.53487848679804	chr9	104443973	104444823	+	0	NA	Intergenic	HAL1b|LINE|L1	-27720	NM_028719	74020	Mm.326240	NM_028719	ENSMUSG00000032564	Cpne4	3632411M23Rik|4933406O10Rik	copine IV	protein-coding
common_peak1-11673-40-30-0.704779372364223-1.49688973786044	chr16	25531716	25533155	+	0	NA	Intergenic	Intergenic	-151416	NM_001127259	22061	Mm.20894	NM_011641	ENSMUSG00000022510	Trp63	AI462811|Ket|P51/P63|P63|P73l|Tp63|Trp53rp1	transformation related protein 63	protein-coding
unique_peak2-33902-6-23--2.01956439034085-2.6100056615562	chr12	54734474	54735023	+	0	NA	intron (NM_013780, intron 3 of 11)	(TG)n|Simple_repeat|Simple_repeat	385084	NM_013780	27386	Mm.247044	NM_013780	ENSMUSG00000021010	Npas3	4930423H22Rik|bHLHe12	neuronal PAS domain protein 3	protein-coding
unique_peak2-39617-1-5--2.2120195109379-1.32905871926422	chr9	89832272	89832691	+	0	NA	intron (NM_011245, intron 2 of 26)	L1VL4|LINE|L1	27868	NM_001039655	19417	Mm.44561	NM_011245	ENSMUSG00000032356	Rasgrf1	AI844718|CDC25|CDC25Mm|Gnrp|Grf1|Grfbeta|P190-A|Ras-GRF1|p190|p190RhoGEF	RAS protein-specific guanine nucleotide-releasing factor 1	protein-coding
common_peak1-18473-16-10-0.658832023630764-0.699649909729472	chr8	84744395	84745174	+	0	NA	Intergenic	Intergenic	181701	NM_001254747	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
unique_peak2-39063-6-20--1.82691931239846-2.0280102512677	chr8	71611598	71612456	+	0	NA	promoter-TSS (NM_007509)	promoter-TSS (NM_007509)	-608	NM_007509	11966	Mm.249096	NM_007509	ENSMUSG00000006273	Atp6v1b2	AI194269|AI790362|Atp6b2|HO57|R74844	ATPase, H+ transporting, lysosomal V1 subunit B2	protein-coding
common_peak2-26012-120-140-0.413410268092956-1.83184849254417	chr19	56547603	56549419	+	0	NA	intron (NM_172641, intron 6 of 12)	intron (NM_172641, intron 6 of 12)	12384	NM_172641	226245	Mm.156742	NM_172641	ENSMUSG00000035818	Plekhs1	9930023K05Rik	pleckstrin homology domain containing, family S member 1	protein-coding
unique_peak1-7009-13-3-1.77847203063777-2.58603100924543	chr8	123675328	123675951	+	0	NA	Intergenic	B1F|SINE|Alu	24054	NM_008024	14241	Mm.5111	NM_008024	ENSMUSG00000097084	Foxl1	FREAC7|Fkh6|fkh-6	forkhead box L1	protein-coding
common_peak2-19760-49-46-0.451694971347546-0.943512743618327	chr1	78488338	78489629	+	0	NA	Intergenic	Intergenic	-3511	NR_102757	23874	Mm.28922	NM_011811	ENSMUSG00000026245	Farsb	C76708|Farsa|Farsl|Farslb|Frsb	phenylalanyl-tRNA synthetase, beta subunit	protein-coding
common_peak2-27746-8-8--0.164702583494742-1.00793137938329	chr3	126922330	126922773	+	0	NA	Intergenic	Intergenic	58328	NR_105029	100862268	Mm.444603	NR_105029	ENSMUSG00000097456	LOC100862268	-	uncharacterized LOC100862268	ncRNA
common_peak2-26970-7-8--0.370834171144123-1.00793137938329	chr2	167062378	167062667	+	0	NA	intron (NM_008968, intron 1 of 9)	intron (NM_008968, intron 1 of 9)	3515	NM_008968	19223	Mm.2339	NM_008968	ENSMUSG00000017969	Ptgis	Cyp8|Cyp8a1|Pgis	prostaglandin I2 (prostacyclin) synthase	protein-coding
common_peak1-10953-30-15-1.16967540949187-2.23573970698983	chr15	25767304	25768369	+	0	NA	Intergenic	Intergenic	-5217	NM_001034851	66270	Mm.25311	NM_025459	ENSMUSG00000022270	Fam134b	1810015C04Rik|AU015349	family with sequence similarity 134, member B	protein-coding
common_peak1-8806-48-102--0.715573375948404-2.32180062021758	chr11	20631486	20632867	+	0	NA	intron (NM_001252503, intron 1 of 7)	intron (NM_001252503, intron 1 of 7)	9383	NM_001290545	216549	Mm.356580	NM_181411	ENSMUSG00000049659	Aftph	-	aftiphilin	protein-coding
common_peak1-9756-58-46-0.741361083212859-2.21542829695182	chr12	54695979	54697083	+	0	NA	intron (NM_013780, intron 3 of 11)	intron (NM_013780, intron 3 of 11)	346867	NM_013780	27386	Mm.247044	NM_013780	ENSMUSG00000021010	Npas3	4930423H22Rik|bHLHe12	neuronal PAS domain protein 3	protein-coding
unique_peak1-425-28-3-3.05295911982146-6.65354359207424	chr1	162012995	162014241	+	0	NA	Intergenic	RMER17B|LTR|ERVK	-5502	NR_038031	75255	Mm.414845	NR_038030	ENSMUSG00000026729	4930562F07Rik	-	RIKEN cDNA 4930562F07 gene	ncRNA
common_peak2-26570-106-111-0.530411932948115-2.38209917102956	chr2	103795967	103797995	+	0	NA	Intergenic	Intergenic	-1171	NM_001142337	16909	Mm.29266	NM_008505	ENSMUSG00000032698	Lmo2	Rbtn-2|Rbtn2|Rhom-2|Ttg2	LIM domain only 2	protein-coding
common_peak1-13044-99-98-0.590001123203042-2.60420088082323	chr19	5802727	5804646	+	0	NA	Intergenic	CpG	-1015	NR_002847	72289	Mm.298256	NR_002847	ENSMUSG00000092341	Malat1	2210401K01Rik|9430072K23Rik|AI647968|Neat2	metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)	ncRNA
common_peak2-28159-5-6--0.511735258063458-0.947717972411649	chr4	107313481	107313899	+	0	NA	Intergenic	Intergenic	43077	NM_019872	56296	Mm.141324	NM_019872	ENSMUSG00000028610	Dmrtb1	Dmrt6|Prp13	DMRT-like family B with proline-rich C-terminal, 1	protein-coding
unique_peak1-2085-14-0-3.89921616035764-4.8164799306237	chr15	36910708	36911343	+	0	NA	Intergenic	Intergenic	26132	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
common_peak1-18985-5-7--0.704380336005853-1.01466476204226	chr9	57148122	57148643	+	0	NA	Intergenic	MTD|LTR|MaLR	-37976	NM_028820	74211	Mm.428905	NM_028820	ENSMUSG00000032300	1700017B05Rik	AA682102|D9Ertd278e	RIKEN cDNA 1700017B05 gene	protein-coding
common_peak1-14544-19-21--0.0567442919756109-0.301029995663971	chr3	32396054	32396846	+	0	NA	Intergenic	Intergenic	-5559	NM_001195074	100502876	Mm.383358	NM_001195074	ENSMUSG00000091091	Kcnmb3	EG435726|Gm5707	potassium large conductance calcium-activated channel, subfamily M, beta member 3	protein-coding
common_peak2-21741-39-23-1.030798746198-2.3865980902211	chr11	115564163	115564619	+	0	NA	intron (NM_008163, intron 1 of 5)	B1_Mus2|SINE|Alu	5520	NM_008163	14784	Mm.439649	NM_008163	ENSMUSG00000059923	Grb2	AA408164|Ash	growth factor receptor bound protein 2	protein-coding
common_peak1-13985-33-13-1.52398264046792-3.43266191012053	chr2	102944808	102946023	+	0	NA	Intergenic	(TTTC)n|Simple_repeat|Simple_repeat	31583	NM_019735	56369	Mm.24772	NM_019735	ENSMUSG00000010911	Apip	APIP2|CGI-29|Mmrp19	APAF1 interacting protein	protein-coding
common_peak1-8918-33-44--0.160515533804146-0.342407020751092	chr11	51635542	51636788	+	0	NA	intron (NM_199299, intron 9 of 11)	intron (NM_199299, intron 9 of 11)	34818	NM_199299	76901	Mm.259996	NM_199299	ENSMUSG00000020387	Jade2	1200017K05Rik|AI480685|Phf15|mKIAA0239	jade family PHD finger 2	protein-coding
unique_peak1-2294-7-3-0.799090830298189-1.23214870625617	chr15	80190874	80191396	+	0	NA	intron (NM_001044308, intron 9 of 36)	intron (NM_001044308, intron 9 of 36)	73467	NM_001044308	239556	Mm.291058	NM_001044308	ENSMUSG00000022416	Cacna1i	Ca(V)3.3	calcium channel, voltage-dependent, alpha 1I subunit	protein-coding
unique_peak2-34907-6-6--0.241956811677302-0.947717972411649	chr15	83165949	83166359	+	0	NA	intron (NM_025445, intron 3 of 15)	intron (NM_025445, intron 3 of 15)	14523	NM_025445	66251	Mm.258910	NM_025445	ENSMUSG00000054277	Arfgap3	0610009H19Rik|1810004P07Rik|1810035F16Rik|9130416J18Rik|Arfgap1	ADP-ribosylation factor GTPase activating protein 3	protein-coding
common_peak2-25780-78-79-0.484892999273172-1.54534477417358	chr19	33391610	33392569	+	0	NA	intron (NM_001167818, intron 4 of 6)	intron (NM_001167818, intron 4 of 6)	74696	NM_001167818	67795	Mm.204591	NM_001146342	ENSMUSG00000071573	Rnls	6530404N21Rik|AI452315|AW060440|C10orf59	renalase, FAD-dependent amine oxidase	protein-coding
common_peak2-19846-17-47--1.36666616251612-2.96402770480589	chr1	91053033	91054863	+	0	NA	Intergenic	Intergenic	36179	NR_106129	102465771		NR_106129		Mir7669	mmu-mir-7669	microRNA mir-7669	ncRNA
unique_peak2-37997-15-25--0.688274967585436-0.73354163167379	chr6	28420929	28421691	+	0	NA	Intergenic	B4|SINE|B4	-9038	NM_019776	56463	Mm.439987	NM_019776	ENSMUSG00000001424	Snd1	AL033314|Tudor-SN	staphylococcal nuclease and tudor domain containing 1	protein-coding
common_peak2-32276-9-8-0.0196884049619079-1.03275496310833	chrX	13346270	13346719	+	0	NA	intron (NM_001284503, intron 2 of 26)	Lx|LINE|L1	77188	NM_001284505	12361	Mm.327591	NM_009806	ENSMUSG00000031012	Cask	DXPri1|DXRib1|LIN-2|Pals3|mLin-2	calcium/calmodulin-dependent serine protein kinase (MAGUK family)	protein-coding
common_peak1-9642-29-12-1.41185036247402-2.85339697372352	chr12	69451272	69452273	+	0	NA	Intergenic	L1M5|LINE|L1	-681514	NR_033146	100316870	Mm.379794	NR_033146		Gm17821	-	DDB1 and CUL4 associated factor 5 pseudogene	pseudo
unique_peak1-3779-9-2-1.60465090568306-1.87199725847353	chr19	55774201	55774634	+	0	NA	intron (NR_045318, intron 1 of 3)	intron (NR_045318, intron 1 of 3)	2277	NR_045318	77594	Mm.329924	NR_045318	ENSMUSG00000097632	4930552P12Rik	-	RIKEN cDNA 4930552P12 gene	ncRNA
unique_peak1-1427-29-8-1.9423650791728-4.27327766748815	chr12	85201489	85202428	+	0	NA	intron (NR_073563, intron 2 of 10)	MTEa|LTR|MaLR	15804	NM_001272056	18222	Mm.4390	NM_010949	ENSMUSG00000021224	Numb	Nb	numb gene homolog (Drosophila)	protein-coding
common_peak2-29256-10-11--0.228547155712387-0.31137425193576	chr5	140444233	140444715	+	0	NA	intron (NM_175522, intron 1 of 1)	intron (NM_175522, intron 1 of 1)	60577	NM_175522	243312	Mm.237102	NM_175522	ENSMUSG00000048988	Elfn1	A930017N06Rik|AI197272|Ppp1r28	leucine rich repeat and fibronectin type III, extracellular 1	protein-coding
unique_peak2-36399-3-7--1.41398308995928-1.23214870625617	chr2	122718552	122719000	+	0	NA	Intergenic	L1Md_A|LINE|L1	111041	NM_021507	59010	Mm.28986	NM_021507	ENSMUSG00000005803	Sqrdl	0610039J17Rik|4930557M22Rik	sulfide quinone reductase-like (yeast)	protein-coding
common_peak1-12311-21-13-0.762134343208631-1.0220094258199	chr17	47294863	47295642	+	0	NA	intron (NM_001097623, intron 3 of 19)	intron (NM_001097623, intron 3 of 19)	17361	NM_001097623	224829	Mm.260989	NM_172622	ENSMUSG00000064043	Trerf1	9430096I18Rik|AI429294|B830015H24|RAPA|Trep-132|Trep132	transcriptional regulating factor 1	protein-coding
unique_peak1-2960-7-3-0.799090830298189-1.23214870625617	chr17	71265632	71266139	+	0	NA	Intergenic	L1M2|LINE|L1	-63013	NM_001164074	21815	Mm.101034	NM_009372	ENSMUSG00000047407	Tgif1	AA959811|AI462167|Tgif	TGFB-induced factor homeobox 1	protein-coding
common_peak2-27086-109-178--0.0976560953770553-0.377201792087372	chr3	90585951	90588798	+	0	NA	Intergenic	L1Md_F|LINE|L1	56546	NM_207263	384997	Mm.316644	NM_207263	ENSMUSG00000042250	Pglyrp4	Gm1478|Gm413	peptidoglycan recognition protein 4	protein-coding
common_peak1-13805-19-17-0.232762325219374-0.392630012299441	chr2	46442435	46443112	+	0	NA	Intergenic	L1_Mus2|LINE|L1	890648	NR_040497	69405	Mm.396184	NR_040497	ENSMUSG00000086202	1700019E08Rik	-	RIKEN cDNA 1700019E08 gene	ncRNA
unique_peak2-37679-10-18--0.891512168434816-0.804350088532826	chr5	96799198	96799929	+	0	NA	Intergenic	Intergenic	-3411	NM_175473	231470	Mm.291120	NM_175473	ENSMUSG00000034687	Fras1	E130113P14Rik|bl|mKIAA1500	Fraser syndrome 1 homolog (human)	protein-coding
common_peak1-16753-9-10--0.269818212233077-1.05503135781948	chr6	34274087	34274598	+	0	NA	Intergenic	Intergenic	-6853	NM_009658	11677	Mm.451	NM_009658	ENSMUSG00000001642	Akr1b3	ALR2|AR|Ahr-1|Ahr1|Akr1b1|Aldor1|Aldr1	aldo-keto reductase family 1, member B3 (aldose reductase)	protein-coding
unique_peak2-39226-5-6--0.511735258063458-0.947717972411649	chr8	110941805	110942263	+	0	NA	Intergenic	Intergenic	166543	NR_077224	109215	Mm.65282	NR_077224		3010033K07Rik	-	RIKEN cDNA 3010033K07 gene	ncRNA
common_peak2-24960-24-30--0.160986407619158-0.316008636696545	chr18	4375421	4376327	+	0	NA	intron (NM_026157, intron 1 of 8)	CpG	284	NM_026157	67440	Mm.49826	NM_026157	ENSMUSG00000024234	Mtpap	0610027A18Rik|AW551379|Papd1	mitochondrial poly(A) polymerase	protein-coding
common_peak2-24481-16-16-0.0308008010177225-0.307611222530525	chr17	24707125	24707739	+	0	NA	intron (NM_013630, intron 11 of 45)	intron (NM_013630, intron 11 of 45)	20537	NM_013630	18763	Mm.30435	NM_013630	ENSMUSG00000032855	Pkd1	PC1|mFLJ00285	polycystic kidney disease 1 homolog	protein-coding
unique_peak1-6657-32-10-1.81966040058236-4.28341153583535	chr8	14970512	14971637	+	0	NA	intron (NM_172751, intron 18 of 28)	intron (NM_172751, intron 18 of 28)	-39951	NM_029116	74901	Mm.46675	NM_029116	ENSMUSG00000055675	Kbtbd11	2900016B01Rik|4930465M17Rik|mKIAA0711	kelch repeat and BTB (POZ) domain containing 11	protein-coding
common_peak2-23940-8-12--0.695217300193522-0.475924844171029	chr16	13437545	13438078	+	0	NA	Intergenic	Intergenic	-11805	NR_030549	100124432		NR_030549	miRBase:MI0005484	Mir193b	Mir193|Mirn193b	microRNA 193b	ncRNA
unique_peak1-1083-14-4-1.57728806547028-2.4322161449009	chr11	86919873	86920573	+	0	NA	intron (NM_175563, intron 1 of 9)	PB1|SINE|Alu	1993	NM_175563	270906	Mm.132381	NM_175563	ENSMUSG00000020493	Prr11	B930067F20Rik	proline rich 11	protein-coding
common_peak2-28759-92-112-0.272173121287577-0.806162152839507	chr5	43781565	43783043	+	0	NA	Intergenic	Intergenic	-124504	NM_001135172	109323	Mm.275553	NM_175425	ENSMUSG00000061535	C1qtnf7	5530401N20Rik|8430425G24Rik|Ctrp7	C1q and tumor necrosis factor related protein 7	protein-coding
unique_peak2-33746-1-13--3.43441193227435-3.36932189928148	chr11	117091106	117091617	+	0	NA	intron (NM_001113486, intron 2 of 11)	Lx8|LINE|L1	30386	NM_001113486	53860	Mm.38450	NM_017380	ENSMUSG00000059248	Sept9	MSF1|Msf|PNUTL4|Sint1	septin 9	protein-coding
common_peak2-25201-13-7-0.778472030637769-0.817533494790411	chr18	60614189	60614575	+	0	NA	Intergenic	L1_Mur3|LINE|L1	47255	NM_134133	106878	Mm.273197	NM_134133	ENSMUSG00000038059	Smim3	2010002N04Rik|AI195350|AW561905|Nid67|cI-41	small integral membrane protein 3	protein-coding
common_peak1-16289-42-45-0.218767371810171-0.478941451571433	chr5	112276553	112277684	+	0	NA	Intergenic	L1MA5A|LINE|L1	-86370	NR_045833	269683	Mm.136946	NM_207252	ENSMUSG00000085271	E130006D01Rik	Gm16018|Gm681|OTTMUSG00000029083	RIKEN cDNA E130006D01 gene	ncRNA
common_peak2-32263-12-10-0.189344366450341-0.386243247519795	chrX	8892840	8893274	+	0	NA	Intergenic	Intergenic	32167	NM_029588	76383	Mm.440761	NM_029588	ENSMUSG00000096571	1700012L04Rik	H2al1	RIKEN cDNA 1700012L04 gene	protein-coding
common_peak2-29852-10-5-0.771452844287613-1.33892459842472	chr6	99095491	99095900	+	0	NA	intron (NM_053202, intron 4 of 18)	intron (NM_053202, intron 4 of 18)	-117403	NM_001197322	108655	Mm.234965	NM_053202	ENSMUSG00000030067	Foxp1	3110052D19Rik|4932443N09Rik|AI461938|AW494214	forkhead box P1	protein-coding
unique_peak1-7038-12-7-0.648775985087639-0.697979855752659	chr8	126881330	126882007	+	0	NA	Intergenic	Lx6|LINE|L1	76168	NM_171824	209966	Mm.234233	NM_171824	ENSMUSG00000050751	Pgbd5	2900019M05Rik|AI854313	piggyBac transposable element derived 5	protein-coding
unique_peak1-1735-8-2-1.42025991722641-1.65811743852845	chr13	101016068	101016562	+	0	NA	intron (NM_010870, intron 1 of 14)	MTC|LTR|MaLR	976	NM_010870	17951	Mm.290476	NM_010870	ENSMUSG00000071203	Naip5	Birc1e|Lgn1|Naip-rs3	NLR family, apoptosis inhibitory protein 5	protein-coding
common_peak1-19043-15-21--0.447266868081641-0.448200956659578	chr9	65294127	65294862	+	0	NA	intron (NM_027134, intron 6 of 8)	intron (NM_027134, intron 6 of 8)	10905	NM_027134	69606	Mm.287956	NM_027134	ENSMUSG00000059183	Mtfmt	2310020P08Rik	mitochondrial methionyl-tRNA formyltransferase	protein-coding
common_peak2-20646-21-32--0.474904854092218-0.550049347815239	chr10	81176544	81177247	+	0	NA	intron (NM_001243067, intron 1 of 3)	ORR1A2-int|LTR|MaLR	9325	NM_001243067	73610	Mm.490466	NM_001243067		Zfp433	1700123A16Rik	RIKEN cDNA 1700123A16 gene	protein-coding
common_peak2-23069-21-15-0.569489265266236-0.756118839439552	chr14	73254248	73254876	+	0	NA	Intergenic	Intergenic	-144752	NM_207636	319448	Mm.205421	NM_207636	ENSMUSG00000033487	Fndc3a	1700094E19Rik|D14Ertd453e|F730017H24Rik|Fndc3|sys	fibronectin type III domain containing 3A	protein-coding
common_peak1-10138-10-25--1.34402437313232-1.74319850844462	chr13	34002264	34002913	+	0	NA	Intergenic	Intergenic	-5011	NM_148942	97848	Mm.272188	NM_148942	ENSMUSG00000052180	Serpinb6c	C76171|C76174|SPI3C|SPIC|ovalbumin	serine (or cysteine) peptidase inhibitor, clade B, member 6c	protein-coding
unique_peak2-36041-8-15--0.994777582052429-0.771068449301683	chr19	44407961	44408622	+	0	NA	intron (NM_183216, intron 1 of 5)	intron (NM_183216, intron 1 of 5)	475	NM_183216	329065	Mm.313583	NM_183216	ENSMUSG00000050195	Scd4	ACOD4	stearoyl-coenzyme A desaturase 4	protein-coding
common_peak1-12430-22-16-0.559821263837065-0.733541631673787	chr17	78217317	78218552	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-381654	NM_015800	50766	Mm.311912	NM_015800	ENSMUSG00000024074	Crim1	AU015004	cysteine rich transmembrane BMP regulator 1 (chordin like)	protein-coding
common_peak2-30332-18-26--0.441968350935117-0.471456499375593	chr7	25237190	25237901	+	0	NA	Intergenic	ID_B1|SINE|B4	-6844	NM_199013	210145	Mm.33811	NM_199013	ENSMUSG00000062028	Irgc1	F630044M05Rik|Gm1102|Gm474|Ifgge|Iigp5|Irgc	immunity-related GTPase family, cinema 1	protein-coding
common_peak1-16649-173-80-1.8488597114052-28.1812063288928	chr6	91207412	91212210	+	0	NA	intron (NM_007992, intron 9 of 17)	intron (NM_007992, intron 9 of 17)	47053	NM_007992	14115	Mm.249146	NM_007992	ENSMUSG00000064080	Fbln2	5730577E14Rik|FIBL-2	fibulin 2	protein-coding
unique_peak1-1287-7-1-1.79909083029819-1.80617997398389	chr11	118427732	118428249	+	0	NA	intron (NM_001285436, intron 3 of 13)	intron (NM_001285436, intron 3 of 13)	89716	NM_172573	217364	Mm.473963	NM_172573	ENSMUSG00000033857	Engase	C130099A03|D230014K01Rik	endo-beta-N-acetylglucosaminidase	protein-coding
common_peak2-20002-90-157--0.249475722234951-0.732823024393424	chr1	134414778	134416251	+	0	NA	intron (NM_177129, intron 17 of 22)	intron (NM_177129, intron 17 of 22)	12707	NM_029025	74626	Mm.34611	NM_029025	ENSMUSG00000048174	Tmem81	4930429O20Rik|AI465369	transmembrane protein 81	protein-coding
common_peak2-23975-13-16--0.30899081061257-0.330004445983672	chr16	17619221	17619874	+	0	NA	promoter-TSS (NM_029945)	promoter-TSS (NM_029945)	100	NM_001164609	77626	Mm.34659	NM_029945	ENSMUSG00000005899	Smpd4	4122402O22Rik|mKIAA1418	sphingomyelin phosphodiesterase 4	protein-coding
common_peak2-20517-37-73--0.683460294143131-1.64294012011226	chr10	60932606	60934403	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-5077	NM_153542	216011	Mm.136116	NM_153542	ENSMUSG00000037151	Lrrc20	BC036304	leucine rich repeat containing 20	protein-coding
common_peak2-24284-51-86--0.368019670246155-0.814709005062661	chr16	97961593	97963169	+	0	NA	Intergenic	Intergenic	22981	NM_023663	72388	Mm.35290	NM_023663	ENSMUSG00000005251	Ripk4	2310069J12Rik|AI552420|ANKK2|Ankrd3|DIk|PKK|RIP4	receptor-interacting serine-threonine kinase 4	protein-coding
common_peak2-19590-5-9--1.02630843089322-1.21398586181642	chr1	21079490	21079849	+	0	NA	Intergenic	Intergenic	-10363	NM_177409	170829	Mm.185680	NM_177409		Tram2	C330003D03Rik	translocating chain-associating membrane protein 2	protein-coding
common_peak2-27515-23-43--0.737664114128217-1.21996307277154	chr3	95434266	95434812	+	0	NA	TTS (NM_001026212)	TTS (NM_001026212)	5637	NM_001026212	56205	Mm.241365	NM_019561	ENSMUSG00000038619	Ensa	1700020C18Rik|2610007F17Rik|AI451924	endosulfine alpha	protein-coding
common_peak1-11387-25-25-0.161410187204014-0.36542888694933	chr15	97784213	97785151	+	0	NA	Intergenic	Intergenic	-9978	NM_201359	380967	Mm.196630	NM_201359	ENSMUSG00000052369	Tmem106c	AI046681|BC046621|D15Ertd405e	transmembrane protein 106C	protein-coding
common_peak1-14416-51-89--0.416929270727102-0.976994348301596	chr2	180041725	180043131	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-17844	NM_173031	271887	Mm.246640	NM_173031	ENSMUSG00000038980	Rbbp8nl	4732416F18	RBBP8 N-terminal like	protein-coding
common_peak1-10466-11-15--0.491306415748387-0.435191258261915	chr13	110967141	110967833	+	0	NA	intron (NM_023852, intron 3 of 4)	intron (NM_023852, intron 3 of 4)	102927	NM_023852	67295	Mm.151600	NM_023852	ENSMUSG00000021700	Rab3c	2700062I01Rik|3110015B08Rik|3110037E15Rik|AI850886	RAB3C, member RAS oncogene family	protein-coding
common_peak2-25182-64-45-0.94188444565159-3.37478943945637	chr18	56974588	56975707	+	0	NA	intron (NM_177115, intron 1 of 4)	intron (NM_177115, intron 1 of 4)	107680	NM_010721	16906	Mm.4105	NM_010721	ENSMUSG00000024590	Lmnb1	-	lamin B1	protein-coding
common_peak1-7721-30-21-0.710243790854576-1.16836819221353	chr1	88262299	88263454	+	0	NA	intron (NR_015507, intron 1 of 1)	B3A|SINE|B2	6727	NR_015507	319336	Mm.389155	NR_015507	ENSMUSG00000073627	C130036L24Rik	ENSMUSG00000073627	RIKEN cDNA C130036L24 gene	ncRNA
common_peak2-19843-37-23-0.941030570764663-1.99811292136509	chr1	91040981	91041762	+	0	NA	exon (NM_133816, exon 4 of 6)	exon (NM_133816, exon 4 of 6)	48756	NR_106129	102465771		NR_106129		Mir7669	mmu-mir-7669	microRNA mir-7669	ncRNA
common_peak2-27175-133-211-0.0036371301201088-0.303078562137761	chr3	34019408	34021097	+	0	NA	Intergenic	ID_B1|SINE|B4	-39976	NM_026332	67713	Mm.274266	NM_026332	ENSMUSG00000027679	Dnajc19	1810055D05Rik|AA959924|Tim14	DnaJ (Hsp40) homolog, subfamily C, member 19	protein-coding
common_peak1-8467-16-21--0.341167976369236-0.392630012299441	chr10	80115858	80116516	+	0	NA	intron (NM_145361, intron 1 of 8)	intron (NM_145361, intron 1 of 8)	3629	NM_145361	208198	Mm.60720	NM_145361	ENSMUSG00000003344	Btbd2	2610037C03Rik|4930512K17Rik	BTB (POZ) domain containing 2	protein-coding
common_peak1-8669-21-19-0.247561170378873-0.427564438475253	chr10	128626200	128627074	+	0	NA	Intergenic	L1Md_T|LINE|L1	-2162	NM_207008	257664	Mm.377884	NM_207008	ENSMUSG00000096000	Olfr773	GA_x6K02T2PULF-10872859-10871923|MOR114-15|Olfr773-ps1	olfactory receptor 773	protein-coding
common_peak1-10408-36-53--0.275566415995714-0.442998361601932	chr13	98262367	98263738	+	0	NA	intron (NR_110430, intron 2 of 2)	intron (NR_110430, intron 2 of 2)	10396	NR_110431	100039691	Mm.219358	NR_110430		Lincenc1	ENSMUSG00000078952|Gm11019|Gm2373|linc-Enc1	long intergenic non-coding RNA, embryonic stem cells expressed 1	ncRNA
unique_peak1-2181-11-4-1.18676548936425-1.68134727924692	chr15	62283562	62284174	+	0	NA	Intergenic	Intergenic	-232862	NR_003523	67552	Mm.484027	NM_026230		H2afy3	4933432H23Rik	H2A histone family, member Y3	pseudo
unique_peak1-538-11-2-1.92373108353046-2.32232533660526	chr1	191193249	191193719	+	0	NA	intron (NM_001281848, intron 1 of 5)	(TATG)n|Simple_repeat|Simple_repeat	-25413	NM_001281847	16526	Mm.33304	NM_010607	ENSMUSG00000037624	Kcnk2	A430027H14Rik|AI848635|TREK-1	potassium channel, subfamily K, member 2	protein-coding
unique_peak2-34089-1-8--2.79698201165906-2.05605744720049	chr13	12461652	12462103	+	0	NA	Intergenic	Intergenic	-25765	NM_144835	217995	Mm.171186	NM_144835	ENSMUSG00000050244	Heatr1	AA517551|B130016L12Rik|BC019693	HEAT repeat containing 1	protein-coding
common_peak2-20577-24-41--0.599107520011044-0.83607543869935	chr10	77252064	77252942	+	0	NA	intron (NM_001287074, intron 1 of 11)	Lx7|LINE|L1	9375	NM_001205034	100503388	Mm.482880	NM_001205034	ENSMUSG00000096380	Gm19668	-	predicted gene, 19668	protein-coding
common_peak2-19842-16-12-0.417823924126969-0.489164546851866	chr1	91024945	91025503	+	0	NA	intron (NM_133816, intron 2 of 5)	intron (NM_133816, intron 2 of 5)	58187	NM_133816	98402	Mm.170983	NM_133816		Sh3bp4	AI594717|AW227605|BOG25	SH3-domain binding protein 4	protein-coding
unique_peak2-32769-10-15--0.643584654991231-0.519648556297791	chr1	172241705	172242290	+	0	NA	exon (NM_001039593, exon 2 of 2)	exon (NM_001039593, exon 2 of 2)	3005	NM_001039593	76925	Mm.33631	NM_001039593	ENSMUSG00000042800	1700015E13Rik	-	RIKEN cDNA 1700015E13 gene	protein-coding
common_peak2-30910-10-17--0.813509656433543-0.699649909729472	chr7	143690861	143691376	+	0	NA	Intergenic	Intergenic	-150020	NR_040459	330664	Mm.127762	NR_040459		C230079O03Rik	C230079O03	RIKEN cDNA C230079O03 gene	ncRNA
common_peak2-25455-26-30--0.0262972182284127-0.301029995663988	chr19	4192055	4192854	+	0	NA	intron (NM_031868, intron 1 of 6)	CpG	280	NM_031868	19045	Mm.1970	NM_031868	ENSMUSG00000040385	Ppp1ca	Ppp1c|dism2	protein phosphatase 1, catalytic subunit, alpha isoform	protein-coding
unique_peak1-114-9-0-3.18961340640422-3.01029995663981	chr1	59476200	59476779	+	0	NA	Intergenic	MTD|LTR|MaLR	-62502	NM_008057	14369	Mm.297906	NM_008057	ENSMUSG00000041075	Fzd7	Fz7	frizzled homolog 7 (Drosophila)	protein-coding
unique_peak2-38497-1-5--2.2120195109379-1.32905871926422	chr7	37375087	37375514	+	0	NA	Intergenic	Intergenic	-107837	NM_172298	243931	Mm.44141	NM_172298	ENSMUSG00000021217	Tshz3	A630038G13Rik|Tsh3|Zfp537|mKIAA1474|teashirt3	teashirt zinc finger family member 3	protein-coding
common_peak2-31849-7-14--1.10779976531033-0.817533494790411	chr9	46176085	46176745	+	0	NA	Intergenic	ORR1A2|LTR|MaLR	-48346	NM_183104	74361	Mm.159169	NM_183104	ENSMUSG00000056617	4931429L15Rik	-	RIKEN cDNA 4931429L15 gene	protein-coding
common_peak1-10040-11-16--0.578769256998726-0.503257505534083	chr13	15660271	15660878	+	0	NA	intron (NM_008130, intron 3 of 14)	B1_Mur3|SINE|Alu	105018	NM_008130	14634	Mm.5098	NM_008130	ENSMUSG00000021318	Gli3	AI854843|AU023367|Bph|GLI3-190|GLI3FL|Pdn|Xt|add	GLI-Kruppel family member GLI3	protein-coding
common_peak1-11130-18-10-0.853487532591054-1.03889213727317	chr15	66891130	66891905	+	0	NA	Intergenic	B4|SINE|B4	-90314	NM_008681	17988	Mm.30837	NM_008681	ENSMUSG00000005125	Ndrg1	CAP43|CMT4D|DRG1|HMSNL|NMSL|Ndr1|Ndrl|PROXY1|RTP|TDD5	N-myc downstream regulated gene 1	protein-coding
unique_peak1-6698-19-5-1.81772482594053-2.59995804677862	chr8	33888562	33889452	+	0	NA	Intergenic	L1_Mur2|LINE|L1	171491	NM_001177589	100042715	Mm.291093	NM_001177589		Gm3985	-	predicted gene 3985	protein-coding
common_peak2-31732-10-14--0.550475250599749-0.446472590016315	chr9	14156688	14157215	+	0	NA	Intergenic	Intergenic	28735	NM_028013	71946	Mm.41423	NM_028013	ENSMUSG00000037419	Endod1	2210414F18Rik|2310067E08Rik|C85344	endonuclease domain containing 1	protein-coding
common_peak1-19353-8-8--0.164702583494742-1.00793137938329	chrX	10729372	10729851	+	0	NA	Intergenic	MLT1C|LTR|MaLR	-146772	NM_001111037	100042922	Mm.374311	NM_001111037	ENSMUSG00000095208	Gm14483	OTTMUSG00000016789	predicted gene 14483	protein-coding
unique_peak1-7133-10-3-1.35641534500877-1.75805390616669	chr9	53384913	53385499	+	0	NA	Intergenic	L1ME3A|LINE|L1	33249	NM_144784	110446	Mm.293233	NM_144784	ENSMUSG00000032047	Acat1	6330585C21Rik|Acat	acetyl-Coenzyme A acetyltransferase 1	protein-coding
common_peak1-17276-12-6-0.841421063030034-1.58711810488664	chr6	135066154	135066688	+	0	NA	exon (NM_053118, exon 2 of 3)	exon (NM_053118, exon 2 of 3)	1880	NM_053118	93746	Mm.49902	NM_053118	ENSMUSG00000030205	Gprc5d	-	G protein-coupled receptor, family C, group 5, member D	protein-coding
unique_peak2-39173-6-8--0.60452689106201-1.03789460276074	chr8	94772170	94772618	+	0	NA	Intergenic	Intergenic	107625	NR_110452	71296	Mm.86664	NR_033641	ENSMUSG00000031736	Crnde	4933436C20Rik	colorectal neoplasia differentially expressed (non-protein coding)	ncRNA
common_peak1-12719-12-7-0.648775985087639-0.697979855752659	chr18	50061941	50062428	+	0	NA	intron (NM_001081371, intron 27 of 42)	intron (NM_001081371, intron 27 of 42)	69533	NM_001081371	240283	Mm.257790	NM_001081371	ENSMUSG00000037416	Dmxl1	C630007L23Rik|D030030C22	Dmx-like 1	protein-coding
unique_peak2-35219-11-14--0.398197011356905-0.379391706698377	chr16	91484301	91485020	+	0	NA	promoter-TSS (NM_010508)	promoter-TSS (NM_010508)	-800	NM_010508	15975	Mm.502	NM_010508		Ifnar1	CD118|Ifar|Ifnar|Ifrc|Infar	interferon (alpha and beta) receptor 1	protein-coding
unique_peak2-33787-3-5--0.998945590680433-0.96108193396963	chr11	119863530	119863957	+	0	NA	3' UTR (NM_001037754, exon 14 of 14)	3' UTR (NM_001037754, exon 14 of 14)	-12338	NR_037225	100526518		NR_037225		Mir3065	mmu-mir-3065	microRNA 3065	ncRNA
unique_peak1-845-11-0-3.50869358425161-3.61235994796777	chr11	16783967	16784493	+	0	NA	intron (NM_007912, intron 15 of 15)	(TC)n|Simple_repeat|Simple_repeat	67055	NR_110421	72735	Mm.268598	NR_015469		Eldr	2810442I21Rik|4930500E12Rik|Fabl	Egfr long non-coding downstream RNA	ncRNA
unique_peak2-39135-2-13--2.72480917832092-2.79529063155376	chr8	84908469	84908966	+	0	NA	intron (NM_001254747, intron 1 of 7)	intron (NM_001254747, intron 1 of 7)	17768	NM_001254747	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
unique_peak1-4160-12-9-0.326847890200276-0.459837087125828	chr2	104095959	104096602	+	0	NA	intron (NM_001033347, intron 2 of 20)	intron (NM_001033347, intron 2 of 20)	133354	NM_026634	68243	Mm.158191	NM_026634	ENSMUSG00000032671	A930018P22Rik	-	RIKEN cDNA A930018P22 gene	protein-coding
unique_peak1-6484-22-3-2.6472841050874-4.58930897763324	chr7	112293660	112294534	+	0	NA	Intergenic	Intergenic	-1274	NM_147045	259047	Mm.223428	NM_147045	ENSMUSG00000044120	Olfr683	MOR40-1	olfactory receptor 683	protein-coding
unique_peak2-32981-10-19--0.965512749878593-0.917676348953458	chr10	59430191	59431047	+	0	NA	Intergenic	Intergenic	-16101	NM_029083	74747	Mm.21697	NM_029083	ENSMUSG00000020108	Ddit4	5830413E08Rik|AA415483|REDD1|Rtp801|dig2	DNA-damage-inducible transcript 4	protein-coding
unique_peak2-36607-11-31--1.49130641574839-2.45535166244229	chr2	180024910	180025723	+	0	NA	promoter-TSS (NM_173031)	promoter-TSS (NM_173031)	-732	NM_173031	271887	Mm.246640	NM_173031	ENSMUSG00000038980	Rbbp8nl	4732416F18	RBBP8 N-terminal like	protein-coding
unique_peak1-4509-7-0-2.79909083029819-2.40823996531185	chr3	22142140	22142646	+	0	NA	Intergenic	L1Md_A|LINE|L1	-7899	NR_004439	19784		NR_004439		Rprl2	RPRH3|Rmrp3	ribonuclease P RNA-like 2	ncRNA
unique_peak1-3011-6-1-1.5653981103803-1.56314192529759	chr17	84612383	84612905	+	0	NA	intron (NM_183021, intron 36 of 37)	intron (NM_183021, intron 36 of 37)	-25357	NM_001001806	12193	Mm.259321	NM_001001806	ENSMUSG00000045817	Zfp36l2	Brf2|ERF2|Tis11d	zinc finger protein 36, C3H type-like 2	protein-coding
common_peak1-9572-11-13--0.298661337805991-0.337263207250336	chr11	118013046	118013637	+	0	NA	Intergenic	B3A|SINE|B2	-22808	NM_001167746	69926	Mm.473893	NM_001167746	ENSMUSG00000033987	Dnah17	2810003K23Rik|Dnahc17|Dnahcl1|Gm1178|mKIAA3028	dynein, axonemal, heavy chain 17	protein-coding
unique_peak1-142-9-0-3.18961340640422-3.01029995663981	chr1	71338532	71339056	+	0	NA	intron (NM_175210, intron 27 of 52)	MamSINE1|SINE|tRNA	122690	NM_175210	74591	Mm.159251	NM_175210	ENSMUSG00000050296	Abca12	4832428G11Rik|4833417A11Rik	ATP-binding cassette, sub-family A (ABC1), member 12	protein-coding
common_peak2-25539-26-16-0.840436250908123-1.24110690293937	chr19	5945239	5945968	+	0	NA	intron (NM_001164057, intron 13 of 17)	intron (NM_001164057, intron 13 of 17)	18603	NM_001164057	18969	Mm.209931	NM_008893	ENSMUSG00000024833	Pola2	AI573378	polymerase (DNA directed), alpha 2	protein-coding
common_peak1-18188-335-506-0.354528528617719-4.10490693903242	chr8	20121505	20123983	+	0	NA	Intergenic	Intergenic	-102352	NR_028428	381598	Mm.359054	NM_001024708	ENSMUSG00000071793	2610005L07Rik	2810038F24Rik|6720476A01Rik	cadherin 11 pseudogene	pseudo
common_peak2-31877-47-50-0.262416082795053-0.538129021504633	chr9	55149100	55150326	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-18281	NM_032002	83961	Mm.443874	NM_032002	ENSMUSG00000032311	Nrg4	AI552600	neuregulin 4	protein-coding
common_peak1-9807-10-7-0.356415345008769-1.12966497611638	chr12	69450194	69450704	+	0	NA	Intergenic	MER115|DNA|Tip100	-680191	NR_033146	100316870	Mm.379794	NR_033146		Gm17821	-	DDB1 and CUL4 associated factor 5 pseudogene	pseudo
common_peak2-20979-11-9-0.186765489364251-0.344532117358383	chr11	20937222	20937619	+	0	NA	Intergenic	Lx8|LINE|L1	-53907	NM_023324	67245	Mm.28957	NM_023324	ENSMUSG00000020134	Peli1	2810468L03Rik|A930031K15Rik|AA409794|AI586297|D11Ertd676e	pellino 1	protein-coding
common_peak1-12569-98-119-0.294878097822032-0.942230112112181	chr18	10725338	10727085	+	0	NA	5' UTR (NM_144860, exon 1 of 21)	5' UTR (NM_144860, exon 1 of 21)	588	NM_144860	225164	Mm.21500	NM_144860	ENSMUSG00000024294	Mib1	DIP-1|E430019M12Rik|Mib|mKIAA1323	mindbomb homolog 1 (Drosophila)	protein-coding
common_peak2-30002-38-41-0.17913523651977-0.420706537898431	chr6	124711607	124713075	+	0	NA	intron (NM_013509, intron 10 of 11)	RSINE1|SINE|B4	-5836	NM_007881	13498	Mm.333380	NM_007881	ENSMUSG00000004263	Atn1	Atr1|Drpla|atrophin-1	atrophin 1	protein-coding
unique_peak2-33007-7-7--0.200909169701811-0.97990265578305	chr10	62577793	62578361	+	0	NA	TTS (NM_182992)	TTS (NM_182992)	15173	NM_016864	53404	Mm.228661	NM_016864	ENSMUSG00000036816	Atoh7	Math5|bHLHa13	atonal homolog 7 (Drosophila)	protein-coding
common_peak2-26573-29-71--1.0576349208272-3.00951212929436	chr2	104590453	104591311	+	0	NA	Intergenic	B3|SINE|B2	-7924	NM_144804	211896	Mm.288805	NM_144804	ENSMUSG00000027173	Depdc7	AV216087	DEP domain containing 7	protein-coding
unique_peak1-3759-10-3-1.35641534500877-1.75805390616669	chr19	54954952	54955451	+	0	NA	Intergenic	Intergenic	218736	NM_008149	14732	Mm.210196	NM_008149	ENSMUSG00000024978	Gpam	GPAT|GPAT1	glycerol-3-phosphate acyltransferase, mitochondrial	protein-coding
unique_peak2-33182-4-6--0.830815435910851-0.989110657569874	chr10	95970845	95971221	+	0	NA	Intergenic	L1Md_T|LINE|L1	-108602	NM_007569	12226	Mm.23811	NM_007569	ENSMUSG00000036478	Btg1	AI426953|AW546738	B cell translocation gene 1, anti-proliferative	protein-coding
common_peak1-10889-563-654-0.891469361549815-37.4363327088911	chr15	85666340	85674636	+	0	NA	intron (NM_001033337, intron 5 of 13)	RMER6A|LTR|ERVK	7754	NM_001033337	239570	Mm.151748	NM_001033337	ENSMUSG00000035944	Ttc38	9030019H09	tetratricopeptide repeat domain 38	protein-coding
common_peak2-22042-20-23--0.0968877161299631-0.305855887145851	chr12	69371340	69371979	+	0	NA	Intergenic	Lx5|LINE|L1	-601401	NR_033146	100316870	Mm.379794	NR_033146		Gm17821	-	DDB1 and CUL4 associated factor 5 pseudogene	pseudo
unique_peak1-4018-12-6-0.841421063030034-1.58711810488664	chr2	38544019	38544565	+	0	NA	Intergenic	Intergenic	25770	NM_139051	26423	Mm.31387	NM_139051	ENSMUSG00000026751	Nr5a1	Ad4BP|ELP|ELP-3|Ftz-F1|Ftzf1|SF-1|SF1	nuclear receptor subfamily 5, group A, member 1	protein-coding
unique_peak2-35547-3-7--1.41398308995928-1.23214870625617	chr17	62782911	62783248	+	0	NA	Intergenic	Intergenic	447587	NM_207654	13640	Mm.7978	NM_010109		Efna5	AL-1|AV158822|EFL-5|Ephrin-A5|Epl7|LERK-7|RAGS	ephrin A5	protein-coding
unique_peak1-3624-8-1-2.00522241794757-2.05605744720049	chr19	36687452	36687838	+	0	NA	intron (NM_001163471, intron 18 of 20)	B2_Mm2|SINE|B2	58516	NM_172637	226098	Mm.61107	NM_172637	ENSMUSG00000041180	Hectd2	4921524L07|A630025O09Rik|AW212605	HECT domain containing 2	protein-coding
unique_peak1-2456-9-1-2.18961340640422-2.31132995230379	chr15	102840958	102841529	+	0	NA	exon (NM_010465, exon 2 of 2)	exon (NM_010465, exon 2 of 2)	1250	NM_010465	15425	Mm.4444	NM_010465	ENSMUSG00000001661	Hoxc6	Hox-3.3|Hox-6.1	homeobox C6	protein-coding
unique_peak2-34344-2-8--2.08737925770563-1.65811743852845	chr13	99344899	99345338	+	0	NA	Intergenic	Intergenic	62247	NM_026685	68344	Mm.28766	NM_026685	ENSMUSG00000046082	Tmem174	0610009B10Rik|AA986094	transmembrane protein 174	protein-coding
common_peak2-25699-46-41-0.505678520470041-1.08181395420695	chr19	18670716	18671545	+	0	NA	intron (NM_017375, intron 2 of 9)	(TG)n|Simple_repeat|Simple_repeat	35173	NM_017375	20409	Mm.172222	NM_017375		Ostf1	C78236|SH3P2|Sh3d3	osteoclast stimulating factor 1	protein-coding
unique_peak2-34224-5-5--0.289342836727009-0.909929411522249	chr13	49492673	49493094	+	0	NA	Intergenic	B3|SINE|B2	-23709	NR_075085	75678	Mm.390586	NM_199056	ENSMUSG00000021385	Ippk	1810043M15Rik|InsP6	inositol 1,3,4,5,6-pentakisphosphate 2-kinase	protein-coding
common_peak1-11832-28-34--0.0763238971235038-0.304271119602326	chr16	84702804	84703873	+	0	NA	Intergenic	CpG	-11047	NR_029565	387173		NR_029565	miRBase:MI0000177	Mir155	Mirn155|mmu-mir-155	microRNA 155	ncRNA
common_peak2-27383-20-48--1.12663505952402-2.44914526326141	chr3	87173745	87174832	+	0	NA	3' UTR (NM_009690, exon 6 of 6)	3' UTR (NM_009690, exon 6 of 6)	-6021	NM_153090	229499	Mm.255203	NM_153090	ENSMUSG00000059994	Fcrl1	A230020G22Rik|Bxmas1|Bxmh1|Bxmh1b|Fcrh1|Fcrh1l|Fcrh1s|Ifgp1	Fc receptor-like 1	protein-coding
unique_peak1-4749-8-2-1.42025991722641-1.65811743852845	chr3	113949514	113950037	+	0	NA	Intergenic	(GA)n|Simple_repeat|Simple_repeat	216317	NM_007729	12814	Mm.209715	NM_007729	ENSMUSG00000027966	Col11a1	C530001D20Rik|cho	collagen, type XI, alpha 1	protein-coding
unique_peak2-34177-6-8--0.60452689106201-1.03789460276074	chr13	34079513	34079882	+	0	NA	3' UTR (NM_001163239, exon 6 of 6)	3' UTR (NM_001163239, exon 6 of 6)	14966	NM_001243192	20719	Mm.252210	NM_009254	ENSMUSG00000060147	Serpinb6a	4930482L21Rik|D330015H01Rik|PI-6|Serpinb6|Spi3|ovalbumin	serine (or cysteine) peptidase inhibitor, clade B, member 6a	protein-coding
common_peak1-17426-8-9--0.316705676939792-1.03275496310833	chr7	12978333	12978777	+	0	NA	Intergenic	Intergenic	29285	NM_001033820	619331	Mm.361832	NM_001033820	ENSMUSG00000034071	Zfp551	9630004E07Rik|Znf551	zinc fingr protein 551	protein-coding
unique_peak1-1217-14-0-3.89921616035764-4.8164799306237	chr11	106783013	106783725	+	0	NA	Intergenic	Intergenic	-1340	NM_025481	66313	Mm.340955	NM_025481	ENSMUSG00000018363	Smurf2	2810411E22Rik|AI558114|AI649275	SMAD specific E3 ubiquitin protein ligase 2	protein-coding
unique_peak2-36153-2-6--1.72480917832092-1.26211192963361	chr2	25181622	25181951	+	0	NA	Intergenic	RCHARR1|DNA|MER1_type	6305	NR_027448	100272219	Mm.382103	NR_027448	ENSMUSG00000097345	AA543186	-	expressed sequence AA543186	ncRNA
unique_peak1-1683-17-7-1.21829633820504-1.55050753388977	chr13	73736747	73737548	+	0	NA	Intergenic	Intergenic	-4303	NM_146047	218335	Mm.30099	NM_146047	ENSMUSG00000021610	Clptm1l	C130052I12Rik|Crr9	CLPTM1-like	protein-coding
unique_peak1-7227-7-5-0.214128329577033-1.01466476204226	chr9	71771309	71771789	+	0	NA	intron (NM_001253862, intron 6 of 19)	B2_Mm1t|SINE|B2	-27646	NM_001253863	21406	Mm.171615	NM_011544	ENSMUSG00000032228	Tcf12	A130037E08Rik|ALF1|HEB|HEBAlt|HTF-4|HTF4|ME1|REB|bHLHb20	transcription factor 12	protein-coding
unique_peak2-33997-5-19--2.02630843089322-2.19184853030482	chr12	87387770	87388176	+	0	NA	intron (NM_001081423, intron 33 of 33)	intron (NM_001081423, intron 33 of 33)	32018	NM_009368	21809	Mm.3992	NM_009368	ENSMUSG00000021253	Tgfb3	Tgfb-3	transforming growth factor, beta 3	protein-coding
common_peak2-31220-46-79--0.423932151638561-0.866757392601618	chr8	69625035	69625729	+	0	NA	Intergenic	Intergenic	241266	NM_001163564	234344	Mm.334561	NM_001163564	ENSMUSG00000014907	Naf1	Gm174	nuclear assembly factor 1 homolog (S. cerevisiae)	protein-coding
common_peak2-20483-10-11--0.228547155712387-0.31137425193576	chr10	50583602	50584183	+	0	NA	Intergenic	Intergenic	-31565	NM_011376	20464	Mm.4774	NM_011376	ENSMUSG00000019913	Sim1	bHLHe14|mSIM1	single-minded homolog 1 (Drosophila)	protein-coding
common_peak1-8050-11-7-0.508693584251613-1.21681515183528	chr1	172216762	172217537	+	0	NA	Intergenic	RMER10A|LTR|ERVL	9694	NM_012009	26904	Mm.57009	NM_012009	ENSMUSG00000096334	Sh2d1b1	EAT-2|EAT-2A|Eat2|Eat2a|Sh2d1b	SH2 domain protein 1B1	protein-coding
common_peak2-28144-19-13-0.595332404604082-0.713635438203849	chr4	99193813	99194365	+	0	NA	Intergenic	RMER17B|LTR|ERVK	-128901	NM_010425	15221	Mm.4758	NM_010425	ENSMUSG00000067261	Foxd3	CWH3|Genesis|Hfh2	forkhead box D3	protein-coding
unique_peak2-35313-1-8--2.79698201165906-2.05605744720049	chr17	14407574	14408032	+	0	NA	Intergenic	RMER20A|LTR|ERVK	-8710	NM_022315	64074	Mm.30162	NM_022315	ENSMUSG00000023886	Smoc2	1700056C05Rik|5430426J21Rik|Smoc2l	SPARC related modular calcium binding 2	protein-coding
common_peak1-8606-20-38--0.797327434271056-1.23883036201157	chr10	115383861	115384772	+	0	NA	Intergenic	MER115|DNA|Tip100	-71103	NM_011217	19279	Mm.336316	NM_011217	ENSMUSG00000020151	Ptprr	Gmcp1|PTP-SL|PTPBR7|RPTPRR|mPTP213	protein tyrosine phosphatase, receptor type, R	protein-coding
common_peak1-16670-25-18-0.613922391901521-0.86528749982161	chr6	4085929	4087070	+	0	NA	Intergenic	Intergenic	-49572	NM_009748	12068	Mm.286457	NM_009748	ENSMUSG00000032757	Bet1	AW555236|Bet-1	blocked early in transport 1 homolog (S. cerevisiae)	protein-coding
common_peak1-9400-53-109--0.640386701108731-2.05620933116781	chr11	100319799	100320724	+	0	NA	Intergenic	Intergenic	13835	NM_172565	217194	Mm.183320	NM_172565	ENSMUSG00000048732	Klhl11	BC011167	kelch-like 11	protein-coding
unique_peak2-39919-4-6--0.830815435910851-0.989110657569874	chrX	101640135	101640509	+	0	NA	Intergenic	ORR1B1|LTR|MaLR	-31137	NM_009592	11306	Mm.426128	NM_009592	ENSMUSG00000031333	Abcb7	AA517758|AU019072|Abc7	ATP-binding cassette, sub-family B (MDR/TAP), member 7	protein-coding
unique_peak2-35224-3-11--1.99894559068043-1.95434855131066	chr16	92058540	92059080	+	0	NA	intron (NM_080456, intron 1 of 2)	CpG	229	NM_080456	121022	Mm.217354	NM_080456	ENSMUSG00000039680	Mrps6	AW046321	mitochondrial ribosomal protein S6	protein-coding
common_peak1-17677-37-13-1.71863814942821-4.54965489029365	chr7	66227249	66228946	+	0	NA	Intergenic	Lx9|LINE|L1	-256023	NM_173010	22215	Mm.9002	NM_011668	ENSMUSG00000025326	Ube3a	4732496B02|5830462N02Rik|A130086L21Rik|Hpve6a|mKIAA4216	ubiquitin protein ligase E3A	protein-coding
common_peak2-29679-8-13--0.802132504110034-0.562038191119711	chr6	72380016	72380585	+	0	NA	3' UTR (NM_019802, exon 15 of 15)	3' UTR (NM_019802, exon 15 of 15)	-8377	NR_046011	78108	Mm.440743	NR_046011		4930414L22Rik	AI449819	RIKEN cDNA 4930414L22 gene	ncRNA
common_peak2-30478-36-61--0.474875224219121-0.827470873527606	chr7	49601628	49602877	+	0	NA	Intergenic	RLTR25B|LTR|ERVK	83487	NR_028441	628490	Mm.246518	NR_028441	ENSMUSG00000070621	Vmn2r-ps60	Casr-rs4|Gprc2a-rs4	vomeronasal 2, receptor, pseudogene 60	pseudo
common_peak2-25446-22-29--0.259606490521114-0.36542888694933	chr19	4121199	4121732	+	0	NA	5' UTR (NM_016666, exon 2 of 7)	5' UTR (NM_016666, exon 2 of 7)	110	NM_001276284	11632	Mm.10433	NM_016666	ENSMUSG00000024847	Aip	AA408703|AW476050|Ara9|D19Bwg1412e|Fkbp16|Xap2	aryl-hydrocarbon receptor-interacting protein	protein-coding
common_peak2-21164-19-35--0.767237674780626-1.06916698217164	chr11	58938052	58938881	+	0	NA	intron (NM_199152, intron 8 of 89)	L1M4b|LINE|L1	11411	NM_001171512	380698	Mm.339542	NM_199152	ENSMUSG00000061462	Obscn	BC046431|Gm878|OTTMUSG00000005786|UNC89	obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF	protein-coding
common_peak2-20605-23-21-0.262335885871783-0.416752705545949	chr10	79984972	79985582	+	0	NA	intron (NM_026094, intron 25 of 27)	B4A|SINE|B4	16592	NM_026094	67331	Mm.52511	NM_026094	ENSMUSG00000003341	Atp8b3	1700042F02Rik|1700056N23Rik|ATPIK|SAPLT	ATPase, class I, type 8B, member 3	protein-coding
unique_peak1-2855-10-4-1.03448725012141-1.5150158574804	chr17	31919457	31919998	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	73010	NM_010831	17691	Mm.290941	NM_010831	ENSMUSG00000024042	Sik1	Msk|Sik|Snf1lk	salt inducible kinase 1	protein-coding
unique_peak1-4984-8-6-0.197867495889966-1.03789460276074	chr4	111720119	111720603	+	0	NA	Intergenic	Intergenic	-33714	NM_178786	320640	Mm.253775	NM_178786	ENSMUSG00000055960	Skint4	9530098N22Rik	selection and upkeep of intraepithelial T cells 4	protein-coding
common_peak1-13667-68-47-0.98499827857714-3.89468630297453	chr2	27539470	27540709	+	0	NA	intron (NM_011305, intron 1 of 9)	intron (NM_011305, intron 1 of 9)	7368	NM_011305	20181	Mm.24624	NM_011305	ENSMUSG00000015846	Rxra	9530071D11Rik|Nr2b1|RXRalpha1	retinoid X receptor alpha	protein-coding
common_peak1-14768-39-22-1.09219929086214-2.58772382823801	chr3	88494400	88496205	+	0	NA	intron (NM_028814, intron 4 of 13)	B2_Mm2|SINE|B2	5586	NM_028814	74200	Mm.251800	NM_028814	ENSMUSG00000028060	2810403A07Rik	A430106P18Rik|AI256352|AI451678|Blom7|Kiaa0907	RIKEN cDNA 2810403A07 gene	protein-coding
common_peak2-25673-10-9-0.0344872501214071-1.05503135781948	chr19	10881238	10881695	+	0	NA	intron (NM_001037801, intron 1 of 11)	RSINE1|SINE|B4	23082	NM_001037801	12511	Mm.290897	NM_009852	ENSMUSG00000024670	Cd6	-	CD6 antigen	protein-coding
common_peak1-10707-29-37--0.135637432828474-0.313095283157754	chr14	59200878	59201956	+	0	NA	Intergenic	ORR1C1|LTR|MaLR	509894	NM_013518	14180	Mm.8846	NM_013518		Fgf9	Eks	fibroblast growth factor 9	protein-coding
common_peak1-8862-93-121-0.180332525943382-0.543503707252088	chr11	32642383	32643861	+	0	NA	intron (NM_134015, intron 13 of 13)	intron (NM_134015, intron 13 of 13)	81472	NM_027050	69351	Mm.65488	NM_027050	ENSMUSG00000020270	Smim23	1700008A04Rik	small integral membrane protein 23	protein-coding
common_peak1-9538-20-18-0.240147271147608-0.388034239052786	chr11	116167558	116168366	+	0	NA	promoter-TSS (NM_001162872)	promoter-TSS (NM_001162872)	90	NM_016857	53413	Mm.22530	NM_016857	ENSMUSG00000020792	Exoc7	Exo70|sec70	exocyst complex component 7	protein-coding
unique_peak1-6985-10-3-1.35641534500877-1.75805390616669	chr8	120371268	120371978	+	0	NA	Intergenic	B4A|SINE|B4	-45794	NM_026758	68533	Mm.181836	NM_026758	ENSMUSG00000031843	Mphosph6	1110001M01Rik|AA536809|C86426	M phase phosphoprotein 6	protein-coding
common_peak1-16722-16-35--1.05166135917425-1.68242911687175	chr6	30173420	30174149	+	0	NA	intron (NM_001169576, intron 3 of 4)	AT_rich|Low_complexity|Low_complexity	20019	NM_001169577	22214	Mm.332967	NM_009459	ENSMUSG00000039159	Ube2h	1500009C23Rik|AI181839|AI326965|AI462483|AW227540|E2-20K|Gid3|N28148|Ubc8	ubiquitin-conjugating enzyme E2H	protein-coding
common_peak2-26706-90-129-0.0319372129136974-0.314291411079304	chr2	128427627	128430132	+	0	NA	Intergenic	Intergenic	84252	NM_008569	17222	Mm.277408	NM_008569	ENSMUSG00000014355	Anapc1	2610021O03Rik|AI047775|AI853536|AW547281|Apc1|Mcpr|tsg24	anaphase promoting complex subunit 1	protein-coding
common_peak2-25761-16-7-1.11826364226806-1.23399803405144	chr19	30124651	30125132	+	0	NA	intron (NM_144873, intron 2 of 15)	intron (NM_144873, intron 2 of 15)	19888	NM_144873	109113	Mm.313364	NM_144873	ENSMUSG00000024817	Uhrf2	2310065A22Rik|AI426270|AW214556|D130071B19Rik|Nirf	ubiquitin-like, containing PHD and RING finger domains 2	protein-coding
common_peak2-30452-13-25--0.921967687503323-0.983972868822056	chr7	45525615	45526281	+	0	NA	Intergenic	Intergenic	993956	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak2-24282-85-127--0.044596751875349-0.308816337106353	chr16	97850944	97852296	+	0	NA	Intergenic	MTE2a|LTR|MaLR	-18818	NM_015775	50528	Mm.276145	NM_015775	ENSMUSG00000000385	Tmprss2	D16Ertd61e	transmembrane protease, serine 2	protein-coding
common_peak2-21083-34-42--0.0441962277008319-0.30102999566401	chr11	50377473	50378524	+	0	NA	Intergenic	Intergenic	-37589	NM_001277305	216725	Mm.110597	NM_175643	ENSMUSG00000036545	Adamts2	ADAM-TS2|ADAMTS-2|ADAMTS-3|PCINP|hPCPNI|mKIAA4060|pNPI	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 2	protein-coding
unique_peak2-36767-4-8--1.19338551529556-1.21878474469819	chr3	65374860	65375276	+	0	NA	Intergenic	Intergenic	-41732	NR_027955	71004	Mm.475465	NM_001033527	ENSMUSG00000074580	4931440P22Rik	-	RIKEN cDNA 4931440P22 gene	ncRNA
common_peak1-12337-58-103--0.404489783250595-0.990270949802597	chr17	55877957	55879417	+	0	NA	Intergenic	Lx2B|LINE|L1	-10562	NM_139138	52614	Mm.210497	NM_139138	ENSMUSG00000032915	Emr4	D17Ertd479e|Egf-tm7|Fire|Gpr127	EGF-like module containing, mucin-like, hormone receptor-like sequence 4	protein-coding
unique_peak1-433-7-0-2.79909083029819-2.40823996531185	chr1	162307346	162307849	+	0	NA	intron (NM_013862, intron 18 of 20)	intron (NM_013862, intron 18 of 20)	-25895	NM_001038621	29809	Mm.25833	NM_013862	ENSMUSG00000026721	Rabgap1l	5830411O09Rik|8430421H08Rik|9630005B12Rik|AW049894|HHL|Hh1|mKIAA0471	RAB GTPase activating protein 1-like	protein-coding
unique_peak2-36726-9-7-0.18961340640422-1.05908390183068	chr3	56270501	56270891	+	0	NA	Intergenic	Intergenic	-283073	NM_030595	26422	Mm.384353	NM_030595	ENSMUSG00000027799	Nbea	Lyst2|mKIAA1544	neurobeachin	protein-coding
common_peak1-11674-11-11--0.0762689164695427-0.301029995663976	chr16	25582942	25583441	+	0	NA	Intergenic	Intergenic	-100660	NM_001127259	22061	Mm.20894	NM_011641	ENSMUSG00000022510	Trp63	AI462811|Ket|P51/P63|P63|P73l|Tp63|Trp53rp1	transformation related protein 63	protein-coding
unique_peak2-32788-7-14--1.10779976531033-0.817533494790411	chr1	180848361	180849079	+	0	NA	intron (NM_001161665, intron 12 of 14)	intron (NM_001161665, intron 12 of 14)	389464	NM_001161665	269152	Mm.129727	NM_177724	ENSMUSG00000026494	Kif26b	4832420M10|BC056349|D230039L06Rik	kinesin family member 26B	protein-coding
common_peak1-10784-9-8-0.0196884049619079-1.03275496310833	chr14	75283706	75284170	+	0	NA	intron (NM_001033439, intron 1 of 19)	intron (NM_001033439, intron 1 of 19)	63746	NM_001252132	380916	Mm.288868	NM_001033439	ENSMUSG00000068015	Lrch1	4832412D13Rik|AI552548|AW215503|Chdc1|mKIAA1016	leucine-rich repeats and calponin homology (CH) domain containing 1	protein-coding
unique_peak1-3658-14-1-2.89921616035764-3.91338994363176	chr19	39095931	39096581	+	0	NA	intron (NM_028089, intron 4 of 8)	L1VL4|LINE|L1	14747	NM_028089	72082	Mm.142581	NM_028089	ENSMUSG00000025002	Cyp2c55	2010318C06Rik	cytochrome P450, family 2, subfamily c, polypeptide 55	protein-coding
common_peak2-22839-1-7--2.62705701021674-1.80617997398389	chr14	20924502	20924899	+	0	NA	Intergenic	Intergenic	-22306	NM_026209	67509	Mm.292423	NM_026209	ENSMUSG00000045107	Saysd1	1810063B07Rik|4930488P03Rik	SAYSVFN motif domain containing 1	protein-coding
common_peak2-26633-19-8-1.23276232521937-1.61268301619756	chr2	119251024	119251590	+	0	NA	intron (NM_026574, intron 22 of 35)	intron (NM_026574, intron 22 of 35)	52058	NM_026574	68142	Mm.330496	NM_026574	ENSMUSG00000034154	Ino80	2310079N15Rik|4632409L19Rik|Inoc1	INO80 homolog (S. cerevisiae)	protein-coding
common_peak1-18878-64-146--0.734225943127761-3.45553044080475	chr9	25251683	25253496	+	0	NA	Intergenic	Intergenic	-36593	NM_026189	67484	Mm.112977	NM_026189	ENSMUSG00000036611	Eepd1	2310005P05Rik|AI481005	endonuclease/exonuclease/phosphatase family domain containing 1	protein-coding
common_peak1-8088-18-13-0.505564229170747-0.625923329873571	chr1	180768043	180769025	+	0	NA	intron (NM_001161665, intron 5 of 14)	B4A|SINE|B4	309278	NM_001161665	269152	Mm.129727	NM_177724	ENSMUSG00000026494	Kif26b	4832420M10|BC056349|D230039L06Rik	kinesin family member 26B	protein-coding
common_peak2-28511-37-36-0.316539705856869-0.566504029620424	chr5	64864043	64865433	+	0	NA	Intergenic	Intergenic	-3509	NR_045411	77382	Mm.366742	NR_045411		C030018K13Rik	-	RIKEN cDNA C030018K13 gene	ncRNA
common_peak2-23228-14-8-0.729291158915332-0.771068449301682	chr15	5513103	5513518	+	0	NA	intron (NR_045274, intron 2 of 4)	intron (NR_045274, intron 2 of 4)	66992	NR_045274	71432	Mm.291087	NR_045274		5430437J10Rik	-	RIKEN cDNA 5430437J10 gene	ncRNA
common_peak1-18476-15-27--0.795190171501948-0.918917574080418	chr8	84752787	84753331	+	0	NA	Intergenic	Intergenic	173426	NM_001254747	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak1-12355-11-31--1.49130641574839-2.45535166244229	chr17	56626400	56627045	+	0	NA	Intergenic	Intergenic	-10819	NM_011218	19280	Mm.258771	NM_011218	ENSMUSG00000013236	Ptprs	AL022616|PTP|PTP-NU3|PTPNU-3|PTPsigma|Ptpt9|R-PTP-S|RPTPsigma	protein tyrosine phosphatase, receptor type, S	protein-coding
common_peak1-9551-9-16--0.897849434846119-0.732381977911291	chr11	117115162	117115839	+	0	NA	intron (NM_001113486, intron 2 of 11)	intron (NM_001113486, intron 2 of 11)	-12060	NM_001113487	53860	Mm.38450	NM_017380	ENSMUSG00000059248	Sept9	MSF1|Msf|PNUTL4|Sint1	septin 9	protein-coding
common_peak2-24363-81-67-0.784586761758226-3.28882736933807	chr17	6807736	6809863	+	0	NA	intron (NM_001166627, intron 2 of 4).3	B2_Mm1t|SINE|B2	2303	NM_001166630	100040563	Mm.457381	NM_001166630		Dynlt1c	100040603|Dynlt1d	dynein light chain Tctex-type 1C	protein-coding
unique_peak1-2401-9-4-0.867685311516858-1.36011389749466	chr15	98616654	98617160	+	0	NA	Intergenic	B1F2|SINE|Alu	-3381	NM_021279	22408	Mm.1123	NM_021279	ENSMUSG00000022997	Wnt1	Int-1|Wnt-1|sw|swaying	wingless-type MMTV integration site family, member 1	protein-coding
common_peak2-20944-11-8-0.338768582809301-1.14218153353838	chr11	8706690	8707009	+	0	NA	Intergenic	Intergenic	-142311	NM_001083587	319939	Mm.337820	NM_001083587	ENSMUSG00000020422	Tns3	BC023928|F830010I22Rik|TEM6|Tens1	tensin 3	protein-coding
common_peak2-31228-34-31-0.382068527001266-0.662333595915619	chr8	69935658	69936657	+	0	NA	Intergenic	L1Md_A|LINE|L1	-78500	NM_008673	17960	Mm.14125	NM_008673	ENSMUSG00000025588	Nat1	Nat-1	N-acetyl transferase 1	protein-coding
common_peak2-24277-37-49--0.117863118288906-0.321605260051241	chr16	96081789	96083441	+	0	NA	intron (NR_040484, intron 1 of 3)	intron (NR_040484, intron 1 of 3)	37705	NR_040485	69776	Mm.120470	NR_040484	ENSMUSG00000086899	1600002D24Rik	-	RIKEN cDNA 1600002D24 gene	ncRNA
common_peak2-26830-11-7-0.508693584251613-1.21681515183528	chr2	152758288	152758650	+	0	NA	exon (NM_010226, exon 1 of 1)	exon (NM_010226, exon 1 of 1)	475	NM_010226	14239	Mm.205798	NM_010226	ENSMUSG00000074676	Foxs1	FREAC10|Fkh3|Fkhl18	forkhead box S1	protein-coding
unique_peak2-39615-7-8--0.370834171144123-1.00793137938329	chr9	88548394	88548968	+	0	NA	Intergenic	L1Md_A|LINE|L1	-54600	NR_040766	320692	Mm.427378	NR_040766	ENSMUSG00000097073	9430037G07Rik	-	RIKEN cDNA 9430037G07 gene	ncRNA
common_peak2-20359-17-10-0.75886471956774-0.917676348953458	chr10	11343281	11343873	+	0	NA	Intergenic	L1Md_T|LINE|L1	280334	NM_010146	13853	Mm.89946	NM_010146		Epm2a	TG-B|Tg(TcraK,TcrbK)TG-BFlv	epilepsy, progressive myoclonic epilepsy, type 2 gene alpha	protein-coding
unique_peak1-7377-11-1-2.50869358425161-2.83420869758413	chrX	73576581	73577213	+	0	NA	Intergenic	Intergenic	-61792	NM_001033799	619294	Mm.423961	NM_001033799	ENSMUSG00000073085	4930428D18Rik	-	RIKEN cDNA 4930428D18 gene	protein-coding
common_peak2-32218-6-7--0.434601889619698-0.97990265578305	chr9	121995595	121996016	+	0	NA	Intergenic	Intergenic	-30579	NM_001164572	20623	Mm.257989	NM_133741	ENSMUSG00000038145	Snrk	2010012F07Rik|AI448042|AW547029|E030034B15|R74830|mKIAA0096	SNF related kinase	protein-coding
common_peak1-19004-12-9-0.326847890200276-0.459837087125828	chr9	59695647	59696316	+	0	NA	intron (NM_173018, intron 16 of 43)	B1_Mur2|SINE|Alu	97000	NM_173018	270163	Mm.249545	NM_173018	ENSMUSG00000039585	Myo9a	4732465J09Rik|C130068I12Rik|C230003M11	myosin IXa	protein-coding
common_peak2-28857-10-12--0.344024373132323-0.340565874754526	chr5	74060905	74061711	+	0	NA	intron (NM_178387, intron 7 of 12)	intron (NM_178387, intron 7 of 12)	18689	NM_178387	73472	Mm.87067	NM_178387	ENSMUSG00000029155	Spata18	1700067I02Rik	spermatogenesis associated 18	protein-coding
unique_peak2-36295-4-6--0.830815435910851-0.989110657569874	chr2	71652359	71652808	+	0	NA	intron (NM_001277970, intron 1 of 24)	intron (NM_001277970, intron 1 of 24)	27587	NM_001277970	16403	Mm.225096	NM_008397		Itga6	5033401O05Rik|AI115430|Cd49f|VLA-6	integrin alpha 6	protein-coding
common_peak1-8319-38-42-0.145187904596432-0.387953346623085	chr10	42477727	42478867	+	0	NA	Intergenic	(TC)n|Simple_repeat|Simple_repeat	-3005	NM_153055	140740	Mm.214344	NM_153055	ENSMUSG00000019802	Sec63	5730478J10Rik|AI649014|AW319215	SEC63-like (S. cerevisiae)	protein-coding
unique_peak1-273-10-2-1.77145284428761-2.09384600808989	chr1	97948755	97949271	+	0	NA	Intergenic	Intergenic	-30678	NR_040467	73454	Mm.396229	NR_040467		1700063A18Rik	-	RIKEN cDNA 1700063A18 gene	ncRNA
unique_peak1-1861-9-1-2.18961340640422-2.31132995230379	chr14	54390865	54391306	+	0	NA	Intergenic	(TA)n|Simple_repeat|Simple_repeat	105470	NM_001205242	100568452	Mm.213248	NM_001205242		A430107P09Rik	Va10	RIKEN cDNA A430107P09 gene	protein-coding
unique_peak2-32892-13-30--1.17572427974911-1.59386218057211	chr10	14017443	14018489	+	0	NA	Intergenic	MER33|DNA|MER1_type	246876	NM_001002268	215798	Mm.440142	NM_001002268	ENSMUSG00000039116	Gpr126	1190004A11Rik|AI449247|AW045736|DREG|Gm222	G protein-coupled receptor 126	protein-coding
common_peak1-8432-10-14--0.550475250599749-0.446472590016315	chr10	77581781	77582319	+	0	NA	Intergenic	Intergenic	49937	NM_015790	50723	Mm.17819	NM_015790	ENSMUSG00000000732	Icosl	AU044799|B7-H2|B7RP-1|B7h|BG071784|GI50|GL50|GL50-B|ICOS-L|Icoslg|LICOS|Ly115l|mKIAA0653	icos ligand	protein-coding
common_peak2-21120-29-31-0.112290080615111-0.353704024845522	chr11	53519647	53520605	+	0	NA	intron (NM_009012, intron 1 of 24)	intron (NM_009012, intron 1 of 24)	695	NM_009012	19360	Mm.4888	NM_009012	ENSMUSG00000020380	Rad50	Mrell|Rad50l	RAD50 homolog (S. cerevisiae)	protein-coding
unique_peak2-37361-10-19--0.965512749878593-0.917676348953458	chr4	134766997	134767979	+	0	NA	Intergenic	Intergenic	61187	NM_013885	29876	Mm.257765	NM_013885	ENSMUSG00000037242	Clic4	D0Jmb3|TU-74|mc3s5|mtCLIC	chloride intracellular channel 4 (mitochondrial)	protein-coding
common_peak2-21839-55-56-0.371729856987961-0.843970404532257	chr11	120672737	120674336	+	0	NA	intron (NM_007988, intron 28 of 42)	intron (NM_007988, intron 28 of 42)	12325	NM_007988	14104	Mm.236443	NM_007988	ENSMUSG00000025153	Fasn	A630082H08Rik|FAS	fatty acid synthase	protein-coding
common_peak1-18239-65-38-1.20676372061488-5.02359584670445	chr8	31149455	31150915	+	0	NA	Intergenic	L1Md_T|LINE|L1	-528682	NR_045856	71314	Mm.158666	NR_045856	ENSMUSG00000097044	4933433F19Rik	-	RIKEN cDNA 4933433F19 gene	ncRNA
common_peak1-7536-12-9-0.326847890200276-0.459837087125828	chr1	34849603	34850255	+	0	NA	Intergenic	Intergenic	-8638	NM_183019	226970	Mm.41604	NM_183019	ENSMUSG00000037509	Arhgef4	9330140K16Rik|Asef|ENSMUSG00000070955	Rho guanine nucleotide exchange factor (GEF) 4	protein-coding
common_peak2-26254-35-43--0.0280613601747932-0.301029995663985	chr2	30123816	30125251	+	0	NA	intron (NM_001281829, intron 2 of 11)	L2b|LINE|L2	2194	NM_001252570	227696	Mm.297949	NM_172267	ENSMUSG00000079484	Phyhd1	-	phytanoyl-CoA dioxygenase domain containing 1	protein-coding
common_peak2-20220-13-12-0.0780323124966764-0.334470287753051	chr1	180768097	180768654	+	0	NA	intron (NM_001161665, intron 5 of 14)	intron (NM_001161665, intron 5 of 14)	309119	NM_001161665	269152	Mm.129727	NM_177724	ENSMUSG00000026494	Kif26b	4832420M10|BC056349|D230039L06Rik	kinesin family member 26B	protein-coding
common_peak1-15045-14-37--1.34871135308594-2.38724857749547	chr3	122274201	122274855	+	0	NA	intron (NM_001114665, intron 2 of 15)	MIRb|SINE|MIR	-29929	NR_106117	102465764		NR_106117		Mir7657	mmu-mir-7657	microRNA mir-7657	ncRNA
unique_peak2-39938-7-13--1.00826409175941-0.697979855752659	chrX	126745898	126746358	+	0	NA	intron (NM_172493, intron 23 of 26)	intron (NM_172493, intron 23 of 26)	461850	NM_172493	54004	Mm.10763	NM_017398	ENSMUSG00000034480	Diap2	Dia3|Diaph2|Drf2|E430022I22Rik	diaphanous homolog 2 (Drosophila)	protein-coding
unique_peak1-4512-20-0-4.48807478459119-NA	chr3	25143830	25144587	+	0	NA	Intergenic	MYSERV6-int|LTR|ERVK	908021	NM_001163387	192167	Mm.316080	NM_138666	ENSMUSG00000063887	Nlgn1	6330415N05Rik|BB179718|NL1|Nlg1|mKIAA1070	neuroligin 1	protein-coding
common_peak2-26158-83-115-0.0562416299785546-0.334157720374157	chr2	18056630	18058263	+	0	NA	intron (NR_045538, intron 8 of 22)	intron (NR_045538, intron 8 of 22)	71234	NM_001252561	17354	Mm.209175	NM_010804	ENSMUSG00000026743	Mllt10	Af10|B130021D15Rik|D630001B22Rik|mKIAA4140	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	protein-coding
unique_peak1-695-7-1-1.79909083029819-1.80617997398389	chr10	80098998	80099349	+	0	NA	intron (NM_134002, intron 2 of 10)	RSINE1|SINE|B4	6772	NM_001159591	103236	Mm.29873	NM_134002	ENSMUSG00000003345	Csnk1g2	2810429I12Rik|AI463719	casein kinase 1, gamma 2	protein-coding
common_peak2-26007-8-7-0.00522241794757061-1.00793137938329	chr19	55849919	55850369	+	0	NA	intron (NM_001142920, intron 4 of 11)	(TC)n|Simple_repeat|Simple_repeat	33844	NM_001142923	21416	Mm.139815	NM_009333	ENSMUSG00000024985	Tcf7l2	TCF4B|TCF4E|Tcf-4|Tcf4|mTcf-4B|mTcf-4E	transcription factor 7 like 2, T cell specific, HMG box	protein-coding
common_peak2-24157-31-20-0.832921248034363-1.41893667893732	chr16	42907220	42907864	+	0	NA	promoter-TSS (NM_001285805)	promoter-TSS (NM_001285805)	-216	NM_001285805	56490	Mm.136238	NM_019778	ENSMUSG00000022708	Zbtb20	1300017A20Rik|7330412A13Rik|A930017C21Rik|D16Wsu73e|DPZF|HOF|ODA-8S|Oda8|Zfp288	zinc finger and BTB domain containing 20	protein-coding
common_peak2-30627-12-15--0.351224014912361-0.332077462497413	chr7	95688630	95689345	+	0	NA	Intergenic	Lx|LINE|L1	110204	NM_028238	72433	Mm.276669	NM_028238	ENSMUSG00000030559	Rab38	2310011F14Rik|AU043391|cht	RAB38, member RAS oncogene family	protein-coding
common_peak2-23364-141-210-0.11194164792568-0.461704705918544	chr15	51990338	51992083	+	0	NA	Intergenic	Intergenic	119557	NM_175503	239435	Mm.24204	NM_175503	ENSMUSG00000068522	Aard	A5D3|AV328152	alanine and arginine rich domain containing protein	protein-coding
unique_peak1-2494-6-0-2.5653981103803-2.10720996964787	chr16	10843886	10844301	+	0	NA	TTS (NM_001162932)	TTS (NM_001162932)	8941	NM_001162932	223970	Mm.325777	NM_001033278	ENSMUSG00000037991	Rmi2	A630055G03Rik|Gm537|Gm929	RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)	protein-coding
common_peak2-26065-16-11-0.533301141546906-0.58239619684445	chr2	60702573	60703138	+	0	NA	intron (NM_020296, intron 1 of 13)	intron (NM_020296, intron 1 of 13)	16640	NM_001141932	56878	Mm.259667	NM_020296	ENSMUSG00000026970	Rbms1	2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1	RNA binding motif, single stranded interacting protein 1	protein-coding
unique_peak2-33092-5-8--0.874305337448166-1.10484139239135	chr10	80225915	80226364	+	0	NA	intron (NM_199322, intron 1 of 27)	intron (NM_199322, intron 1 of 27)	8188	NM_199322	208266	Mm.152371	NM_199322	ENSMUSG00000061589	Dot1l	A630076O07|AW907654|Dot1|KMT4|mDot1	DOT1-like, histone H3 methyltransferase (S. cerevisiae)	protein-coding
common_peak1-9560-8-11--0.579740082773585-1.14218153353838	chr11	117779438	117779931	+	0	NA	Intergenic	Intergenic	-44844	NM_027919	71776	Mm.3200	NM_027919	ENSMUSG00000017713	Tha1	1300017K07Rik|GLY1	threonine aldolase 1	protein-coding
unique_peak1-2770-8-3-1.00522241794757-1.39487600375387	chr17	6168356	6168867	+	0	NA	intron (NM_054040, intron 1 of 13)	intron (NM_054040, intron 1 of 13)	30463	NM_054040	68842	Mm.449307	NM_054040	ENSMUSG00000034377	Tulp4	1110057P05Rik|2210038L17Rik|Tusp	tubby like protein 4	protein-coding
unique_peak1-440-12-5-1.06381348436648-1.78669045979184	chr1	165194913	165195445	+	0	NA	intron (NM_001025570, intron 1 of 2)	intron (NM_001025570, intron 1 of 2)	48602	NM_011127	18933	Mm.288642	NM_011127	ENSMUSG00000026586	Prrx1	A230024N07Rik|AA755424|AI385634|AI843499|K-2|Pmx|Pmx1|Prx1|mHox	paired related homeobox 1	protein-coding
common_peak2-22940-27-42--0.434718803806862-0.595371917655149	chr14	47472497	47473113	+	0	NA	intron (NM_026832, intron 4 of 5)	intron (NM_026832, intron 4 of 5)	20886	NM_026832	68755	Mm.343809	NM_026832	ENSMUSG00000055128	Cgrrf1	1110038G02Rik|1810009H17Rik|CGR19	cell growth regulator with ring finger domain 1	protein-coding
unique_peak2-37847-6-16--1.52206473087004-1.32521814697968	chr5	135626811	135627587	+	0	NA	intron (NM_013763, intron 1 of 6)	intron (NM_013763, intron 1 of 6)	1618	NM_013763	27368	Mm.36746	NM_013763		Tbl2	C76179|WS-bTRP	transducin (beta)-like 2	protein-coding
common_peak2-27167-126-265--0.417622235549364-2.34652380507229	chr3	31093431	31096237	+	0	NA	Intergenic	Intergenic	45992	NM_008770	18417	Mm.4425	NM_008770	ENSMUSG00000037625	Cldn11	Claudin-11|Claudin11|Osp|Otm	claudin 11	protein-coding
common_peak1-8634-22-21-0.187852486450107-0.376654945067947	chr10	121625485	121626336	+	0	NA	Intergenic	L1_Mus3|LINE|L1	69157	NR_027637	100043513	Mm.429141	NR_027637		Gm4489	Gm241	predicted gene 4489	ncRNA
unique_peak2-39464-5-5--0.289342836727009-0.909929411522249	chr9	54644320	54644732	+	0	NA	Intergenic	Intergenic	31971	NM_013496	12903	Mm.34797	NM_013496	ENSMUSG00000032291	Crabp1	AI326249|CRABP-I|Crabp-1|CrabpI|Rbp-5	cellular retinoic acid binding protein I	protein-coding
common_peak2-21048-23-24-0.0779113147343562-0.318406410381916	chr11	40733661	40734561	+	0	NA	Intergenic	L1VL2|LINE|L1	-165323	NM_009831	12450	Mm.2103	NM_009831	ENSMUSG00000020326	Ccng1	AI314029	cyclin G1	protein-coding
unique_peak2-37118-1-10--3.08648862885404-2.57096726280955	chr4	8911401	8911863	+	0	NA	Intergenic	Lx8|LINE|L1	-284832	NM_028940	74438	Mm.473368	NM_028940	ENSMUSG00000041216	Clvs1	4933402J24Rik|Clvl1|Rlbp1l1	clavesin 1	protein-coding
common_peak2-30784-10-16--0.73104749624157-0.604422558181019	chr7	126759663	126760335	+	0	NA	Intergenic	Intergenic	-1343	NM_054094	117147	Mm.427560	NM_054094	ENSMUSG00000033533	Acsm1	Acas3|Bucs1|Macs	acyl-CoA synthetase medium-chain family member 1	protein-coding
common_peak2-20723-20-14-0.581184188982674-0.690311289528838	chr10	96871669	96872209	+	0	NA	Intergenic	Intergenic	-14173	NR_039547	100628616		NR_039547		Mir3966	mmu-mir-3966|mu-mir-3966	microRNA 3966	ncRNA
common_peak1-15537-8-13--0.802132504110034-0.562038191119711	chr4	119105194	119105661	+	0	NA	intron (NM_001014900, intron 1 of 7)	intron (NM_001014900, intron 1 of 7)	10138	NM_001014900	332934	Mm.388911	NM_001014900	ENSMUSG00000070806	Zmynd12	AI414736	zinc finger, MYND domain containing 12	protein-coding
unique_peak2-33257-1-6--2.43441193227435-1.56314192529759	chr10	128167459	128167858	+	0	NA	intron (NM_016811, intron 12 of 23)	intron (NM_016811, intron 12 of 23)	13454	NM_016811	13139	Mm.291235	NM_016811	ENSMUSG00000025357	Dgka	80kDa|AW146112|Dagk1	diacylglycerol kinase, alpha	protein-coding
common_peak2-31632-34-107--1.3728189751622-6.67027976519762	chr8	123653482	123654846	+	0	NA	3' UTR (NM_008024, exon 1 of 1)	3' UTR (NM_008024, exon 1 of 1)	2579	NM_008024	14241	Mm.5111	NM_008024	ENSMUSG00000097084	Foxl1	FREAC7|Fkh6|fkh-6	forkhead box L1	protein-coding
common_peak2-28716-12-7-0.648775985087639-0.697979855752659	chr5	35739739	35740041	+	0	NA	Intergenic	CpG	8124	NM_010445	15371	Mm.358606	NM_010445	ENSMUSG00000067438	Hmx1	Nkx5-3	H6 homeobox 1	protein-coding
unique_peak2-38397-5-10--1.16381195464315-1.33892459842472	chr7	19603994	19604517	+	0	NA	intron (NM_008260, intron 1 of 1)	MIR|SINE|MIR	4633	NM_008260	15377	Mm.42260	NM_008260	ENSMUSG00000040891	Foxa3	Hnf-3g|Hnf3g|Tcf-3g|Tcf3g	forkhead box A3	protein-coding
common_peak1-11384-30-30-0.215479099104998-0.419637632935632	chr15	97767735	97768814	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	-26386	NM_201359	380967	Mm.196630	NM_201359	ENSMUSG00000052369	Tmem106c	AI046681|BC046621|D15Ertd405e	transmembrane protein 106C	protein-coding
unique_peak1-4691-12-5-1.06381348436648-1.78669045979184	chr3	96696814	96697479	+	0	NA	intron (NM_026229, intron 4 of 13)	intron (NM_026229, intron 4 of 13)	12075	NM_026229	67549	Mm.46722	NM_026229		Gpr89	4933412D19Rik|Gpr89a|SH120	G protein-coupled receptor 89	protein-coding
unique_peak1-564-10-2-1.77145284428761-2.09384600808989	chr1	194662726	194663328	+	0	NA	Intergenic	Intergenic	-4872	NR_040468	73455	Mm.414869	NR_040468		1700065J18Rik	-	RIKEN cDNA 1700065J18 gene	ncRNA
unique_peak2-39145-13-15--0.221527969362231-0.308519316180257	chr8	86825721	86826560	+	0	NA	Intergenic	Intergenic	-31839	NM_026350	67736	Mm.30095	NM_026350	ENSMUSG00000004994	Ccdc130	4930527D15Rik|C77430	coiled-coil domain containing 130	protein-coding
common_peak2-30792-10-17--0.813509656433543-0.699649909729472	chr7	127244529	127245217	+	0	NA	Intergenic	ORR1A1|LTR|MaLR	-1067	NM_145586	233806	Mm.257952	NM_145586	ENSMUSG00000030917	Tmem159	8430420C20Rik	transmembrane protein 159	protein-coding
common_peak1-11900-85-252--1.02759032656966-9.95490390958673	chr17	15023417	15025264	+	0	NA	intron (NM_175173, intron 21 of 24)	intron (NM_175173, intron 21 of 24)	55789	NM_175173	71682	Mm.122698	NM_175173	ENSMUSG00000046991	Wdr27	0610012K18Rik	WD repeat domain 27	protein-coding
common_peak1-9599-30-58--0.712967639869968-1.42954500397924	chr11	120098869	120099543	+	0	NA	intron (NM_198423, intron 2 of 27)	CpG-2927	4945	NM_198423	268515	Mm.309498	NM_198423	ENSMUSG00000039741	Bahcc1	B930044J06|BC060615	BAH domain and coiled-coil containing 1	protein-coding
common_peak2-19614-22-18-0.399356591643819-0.549581527953406	chr1	36088080	36088884	+	0	NA	Intergenic	MT2_Mm|LTR|ERVL	-36763	NM_015818	50785	Mm.213566	NM_015818	ENSMUSG00000045216	Hs6st1	6Ost1	heparan sulfate 6-O-sulfotransferase 1	protein-coding
unique_peak1-6716-12-1-2.64877598508764-3.36932189928148	chr8	39059885	39060439	+	0	NA	intron (NM_145841, intron 1 of 7)	RLTR13B1|LTR|ERVK	255094	NR_029884	723860		NR_029884		Mir383	Mirn383|mmu-mir-383	microRNA 383	ncRNA
common_peak1-19344-19-13-0.595332404604082-0.713635438203849	chrX	7841334	7842328	+	0	NA	Intergenic	Intergenic	-6676	NM_172479	209837	Mm.6055	NM_172479	ENSMUSG00000031170	Slc38a5	C81234|E330031E14|JM24|SN2	solute carrier family 38, member 5	protein-coding
common_peak1-9204-24-23-0.208247402046561-0.407645899519042	chr11	80810008	80810897	+	0	NA	intron (NM_001034013, intron 1 of 9)	intron (NM_001034013, intron 1 of 9)	138561	NM_029367	75622	Mm.26988	NM_029367	ENSMUSG00000053184	Spaca3	1700025M08Rik|ALLP17|Lyc3|SLLP1|mSLLP1	sperm acrosome associated 3	protein-coding
unique_peak1-1535-9-2-1.60465090568306-1.87199725847353	chr13	16717383	16717981	+	0	NA	Intergenic	Intergenic	611374	NM_008380	16323	Mm.8042	NM_008380	ENSMUSG00000041324	Inhba	-	inhibin beta-A	protein-coding
common_peak2-23268-7-5-0.214128329577033-1.01466476204226	chr15	25768414	25768770	+	0	NA	Intergenic	Intergenic	-4461	NM_001034851	66270	Mm.25311	NM_025459	ENSMUSG00000022270	Fam134b	1810015C04Rik|AU015349	family with sequence similarity 134, member B	protein-coding
common_peak2-20986-9-10--0.269818212233077-1.05503135781948	chr11	22437149	22437489	+	0	NA	Intergenic	Lx|LINE|L1	25033	NM_153596	103765	Mm.221274	NM_153596	ENSMUSG00000049904	Tmem17	AI503894|AW049890	transmembrane protein 17	protein-coding
unique_peak2-33292-8-19--1.31670567693979-1.30305656033811	chr11	102284916	102285541	+	0	NA	Intergenic	Lx|LINE|L1	-6408	NM_008175	14824	Mm.1568	NM_008175	ENSMUSG00000034708	Grn	Pgrn|epithelin	granulin	protein-coding
common_peak1-9922-22-28--0.210696890040167-0.337923771396236	chr12	100159192	100160034	+	0	NA	intron (NM_029553, intron 1 of 13)	intron (NM_029553, intron 1 of 13)	791	NM_198311	76260	Mm.282660	NM_029553	ENSMUSG00000021013	Ttc8	0610012F22Rik|AV001447|BBS8	tetratricopeptide repeat domain 8	protein-coding
common_peak2-27465-5-7--0.704380336005853-1.01466476204226	chr3	90597599	90598005	+	0	NA	Intergenic	Intergenic	66974	NM_207263	384997	Mm.316644	NM_207263	ENSMUSG00000042250	Pglyrp4	Gm1478|Gm413	peptidoglycan recognition protein 4	protein-coding
common_peak1-16634-7-14--1.10779976531033-0.817533494790411	chr6	40435688	40436138	+	0	NA	Intergenic	Intergenic	-5324	NM_001025385	574417	Mm.386354	NM_001025385	ENSMUSG00000052850	Tas2r137	T2R37|Tas2r3|mt2r41	taste receptor, type 2, member 137	protein-coding
unique_peak1-6472-19-8-1.23276232521937-1.61268301619756	chr7	109600188	109601128	+	0	NA	intron (NM_009103, intron 7 of 18)	intron (NM_009103, intron 7 of 18)	10449	NM_009103	20133	Mm.197486	NM_009103	ENSMUSG00000030978	Rrm1	RnrM1	ribonucleotide reductase M1	protein-coding
common_peak1-8284-38-27-0.764097737240927-1.59508594240593	chr10	26373926	26375670	+	0	NA	Intergenic	Lx5|LINE|L1	19659	NR_033633	667572	Mm.482728	NR_033633	ENSMUSG00000098179	Gm8709	EG667572	glyceraldehyde-3-phosphate dehydrogenase pseudogene	pseudo
unique_peak1-3963-10-5-0.771452844287613-1.33892459842472	chr2	30918255	30918764	+	0	NA	intron (NM_001038700, intron 6 of 14)	B3|SINE|B2	33511	NM_001177650	14269	Mm.52297	NM_019406	ENSMUSG00000075415	Fnbp1	1110057E06Rik|2210010H06Rik|FBP1|Fbp17	formin binding protein 1	protein-coding
unique_peak2-32717-5-7--0.704380336005853-1.01466476204226	chr1	156508033	156508399	+	0	NA	intron (NM_009782, intron 3 of 46)	intron (NM_009782, intron 3 of 46)	64834	NM_009782	12290	Mm.267517	NM_009782	ENSMUSG00000004110	Cacna1e	A430040I15|BII|Cach6|Cacnl1a6|Cav2.3|Cchra1|alpha1E	calcium channel, voltage-dependent, R type, alpha 1E subunit	protein-coding
unique_peak2-37943-2-4--1.23938235115068-0.931118710592187	chr5	148673497	148673932	+	0	NA	intron (NM_025624, intron 1 of 5)	intron (NM_025624, intron 1 of 5)	1510	NM_025624	66537	Mm.332855	NM_025624	ENSMUSG00000029649	Pomp	2510048O06Rik|Ump1	proteasome maturation protein	protein-coding
common_peak2-30190-12-15--0.351224014912361-0.332077462497413	chr7	29458033	29458747	+	0	NA	Intergenic	Intergenic	-19478	NM_207238	233040	Mm.116116	NM_207238	ENSMUSG00000037463	Fbxo27	E130008B10Rik|FBG5|Gm161	F-box protein 27	protein-coding
common_peak2-27208-18-18-0.0649916377847664-0.323898164595606	chr3	41083247	41084005	+	0	NA	Intergenic	Intergenic	-196658	NM_027558	70804	Mm.40321	NM_027558	ENSMUSG00000049940	Pgrmc2	4631434O19Rik|5730409G06Rik|DG6|PMBP	progesterone receptor membrane component 2	protein-coding
common_peak1-12774-12-8-0.478850983645327-0.562038191119709	chr18	61212712	61213317	+	0	NA	intron (NM_001146268, intron 1 of 22)	intron (NM_001146268, intron 1 of 22)	8210	NM_008809	18596	Mm.4146	NM_008809	ENSMUSG00000024620	Pdgfrb	AI528809|CD140b|PDGFR-1|Pdgfr	platelet derived growth factor receptor, beta polypeptide	protein-coding
common_peak1-14245-21-18-0.32156175182265-0.48779450977742	chr2	154436454	154437260	+	0	NA	Intergenic	Intergenic	-2247	NM_199304	228807	Mm.103555	NM_199304	ENSMUSG00000059842	Zfp341	Znf341	zinc finger protein 341	protein-coding
common_peak1-16643-81-50-1.19962426103707-6.30563463100427	chr6	84310713	84313674	+	0	NA	Intergenic	Intergenic	61639	NR_046063	100038556	Mm.387783	NR_046063		Gm10445	ENSMUSG00000072956	predicted gene 10445	ncRNA
unique_peak1-4561-8-4-0.683294323060208-1.21878474469819	chr3	51889295	51889838	+	0	NA	intron (NM_001004176, intron 1 of 4)	intron (NM_001004176, intron 1 of 4)	19362	NM_001004176	433586	Mm.234972	NM_001004176	ENSMUSG00000061143	Maml3	AV234550|BC049812|Mam-2|mKIAA1816	mastermind like 3 (Drosophila)	protein-coding
common_peak1-11585-27-31--0.00845404910476422-0.304476922018591	chr16	15862358	15863797	+	0	NA	5' UTR (NM_029354, exon 1 of 3)	5' UTR (NM_029354, exon 1 of 3)	338	NM_029354	72083	Mm.22351	NM_029354	ENSMUSG00000022671	Mzt2	2410018G20Rik|2610001E06Rik|Fam128|Fam128b	mitotic spindle organizing protein 2	protein-coding
common_peak2-25952-52-64-0.0858921772372447-0.34185676619046	chr19	47536582	47538777	+	0	NA	intron (NM_001164717, intron 1 of 13)	intron (NM_001164717, intron 1 of 13)	1222	NM_001164717	14218	Mm.127560	NM_008018	ENSMUSG00000053617	Sh3pxd2a	2310014D11Rik|AA589508|AI256723|AI413738|C230050L11|EG329070|Fish|Gm5098|Sh3md1|TSK5|Tks5	SH3 and PX domains 2A	protein-coding
common_peak1-11099-14-24--0.74464002941708-0.756118839439549	chr15	61127365	61128103	+	0	NA	Intergenic	Intergenic	-374909	NM_001081067	117586	Mm.291499	NM_001081067	ENSMUSG00000022347	A1bg	C44	alpha-1-B glycoprotein	protein-coding
unique_peak2-36863-4-13--1.83081543591085-2.04196296489515	chr3	90513425	90514075	+	0	NA	Intergenic	RMER1A|Other|Other	-14107	NM_009114	20202	Mm.2128	NM_009114	ENSMUSG00000056071	S100a9	60B8Ag|AW546964|BEE22|Cagb|GAGB|L1Ag|MRP14|p14	S100 calcium binding protein A9 (calgranulin B)	protein-coding
common_peak1-8588-9-27--1.61774151565338-2.34622402919155	chr10	102511969	102512471	+	0	NA	Intergenic	Intergenic	-20809	NM_172553	216285	Mm.19287	NM_172553	ENSMUSG00000036602	Alx1	AI314867|C130005I02|Cart1	ALX homeobox 1	protein-coding
unique_peak2-33834-5-4--0.0263084308932156-0.909929411522249	chr12	8947667	8947956	+	0	NA	Intergenic	Intergenic	-6924	NM_010770	17182	Mm.42226	NM_010770	ENSMUSG00000020583	Matn3	AV009181	matrilin 3	protein-coding
common_peak1-14539-80-86-0.407632270520624-1.21277003021814	chr3	30994986	30996587	+	0	NA	5' UTR (NM_011386, exon 2 of 7)	5' UTR (NM_011386, exon 2 of 7)	1806	NM_001039090	20482	Mm.15406	NM_011386	ENSMUSG00000027660	Skil	Skir|SnoN|sno	SKI-like	protein-coding
unique_peak1-3440-12-5-1.06381348436648-1.78669045979184	chr19	7054701	7055230	+	0	NA	promoter-TSS (NM_001166368)	promoter-TSS (NM_001166368)	-14	NM_001166368	14227	Mm.4234	NM_008020	ENSMUSG00000056629	Fkbp2	13kDa|FKBP-2|mFKBP13|mFKBP2	FK506 binding protein 2	protein-coding
common_peak1-19379-34-36-0.172615161372316-0.401350871931209	chrX	37126448	37127702	+	0	NA	Intergenic	AT_rich|Low_complexity|Low_complexity	89706	NM_001191032	100504400	Mm.373409	NM_001191032	ENSMUSG00000095240	Cypt14	-	cysteine-rich perinuclear theca 14	protein-coding
common_peak1-8354-19-26--0.352200175501782-0.416752705545949	chr10	58322444	58323294	+	0	NA	intron (NM_172788, intron 1 of 9)	Lx8|LINE|L1	46762	NM_172788	237353	Mm.333078	NM_172788	ENSMUSG00000037990	Sh3rf3	4831416G18Rik|Igfbp5-ip|Sh3md4|Sh3rf31	SH3 domain containing ring finger 3	protein-coding
common_peak2-21152-48-56-0.138037137070073-0.390495201889466	chr11	58008894	58009901	+	0	NA	Intergenic	Intergenic	-3661	NM_018738	16145	Mm.33902	NM_018738	ENSMUSG00000078853	Igtp	AW558444|Irgm3	interferon gamma induced GTPase	protein-coding
common_peak2-24872-39-62--0.361518676580763-0.632401539335832	chr17	80479451	80480851	+	0	NA	Intergenic	RMER6B|LTR|ERVK	-18543	NM_144802	72692	Mm.64579	NM_144802	ENSMUSG00000024095	Hnrnpll	2510028H02Rik|2810036L13Rik|AI256697|AI852082|Hnrpll	heterogeneous nuclear ribonucleoprotein L-like	protein-coding
unique_peak2-37671-7-6--0.00826409175941478-0.97990265578305	chr5	93151968	93152390	+	0	NA	intron (NM_015756, intron 1 of 10)	(TGGA)n|Simple_repeat|Simple_repeat	39718	NM_015756	27428	Mm.46014	NM_015756	ENSMUSG00000029381	Shroom3	AL022960|D5Ertd287e|Shrm|Shrm3	shroom family member 3	protein-coding
common_peak2-30803-3-8--1.58390809140159-1.39487600375387	chr7	127477649	127477991	+	0	NA	intron (NM_177213, intron 3 of 30)	intron (NM_177213, intron 3 of 30)	5622	NM_177213	320631	Mm.78330	NM_177213	ENSMUSG00000054746	Abca15	4930500I12Rik	ATP-binding cassette, sub-family A (ABC1), member 15	protein-coding
unique_peak1-772-12-6-0.841421063030034-1.58711810488664	chr10	127603485	127604144	+	0	NA	intron (NM_001039080, intron 2 of 13)	intron (NM_001039080, intron 2 of 13)	9810	NM_019711	56516	Mm.42247	NM_019711	ENSMUSG00000040043	Rbms2	2610315E04Rik|Scr3	RNA binding motif, single stranded interacting protein 2	protein-coding
unique_peak1-5836-11-4-1.18676548936425-1.68134727924692	chr6	72620937	72621526	+	0	NA	intron (NM_009332, intron 3 of 11)	intron (NM_009332, intron 3 of 11)	41406	NR_040421	100038714	Mm.321330	NR_040421		Gm15401	ENSMUSG00000072999|OTTMUSG00000021199	predicted gene 15401	ncRNA
unique_peak1-7369-8-0-3.00522241794757-2.70926996097583	chrX	50611824	50612423	+	0	NA	intron (NM_001166365, intron 7 of 8)	intron (NM_001166365, intron 7 of 8)	10859	NM_030167	78755	Mm.28559	NM_030167	ENSMUSG00000036022	Fam122b	4632404H22Rik|AI256344|SPACIA2	family with sequence similarity 122, member B	protein-coding
unique_peak2-36209-3-6--1.22133801201688-1.08602067057793	chr2	33129870	33130350	+	0	NA	intron (NM_001290570, intron 5 of 16)	intron (NM_001290570, intron 5 of 16)	58629	NM_011923	26360	Mm.208919	NM_011923	ENSMUSG00000004105	Angptl2	AI593246|AW260363|Arp2	angiopoietin-like 2	protein-coding
unique_peak2-37490-1-6--2.43441193227435-1.56314192529759	chr5	5374471	5374825	+	0	NA	intron (NM_011074, intron 1 of 14)	(GTGTG)n|Simple_repeat|Simple_repeat	5603	NM_011074	18647	Mm.389061	NM_011074	ENSMUSG00000028926	Cdk14	Pftk1|mKIAA0834	cyclin-dependent kinase 14	protein-coding
common_peak2-24011-20-15-0.488074784591193-0.590343908676236	chr16	21332920	21333615	+	0	NA	Intergenic	Intergenic	-36322	NR_046162	328646	Mm.404748	NR_046162	ENSMUSG00000096918	Gm16863	A830060N17	predicted gene, 16863	ncRNA
common_peak1-12618-66-103--0.18195605371525-0.435844194873134	chr18	32067291	32068571	+	0	NA	TTS (NM_026006)	TTS (NM_026006)	3626	NM_026006	67158	Mm.31537	NM_026006	ENSMUSG00000044982	Sft2d3	2610206C24Rik|AI847965|AW046173	SFT2 domain containing 3	protein-coding
common_peak2-19527-60-70-0.204544742115849-0.506962665446446	chr1	64798376	64800609	+	0	NA	Intergenic	Intergenic	-15168	NM_022721	14367	Mm.150813	NM_022721	ENSMUSG00000045005	Fzd5	5330434N09Rik|AI427138|Fz-5|Fz5|mFz5	frizzled homolog 5 (Drosophila)	protein-coding
unique_peak2-39936-1-6--2.43441193227435-1.56314192529759	chrX	125104202	125104580	+	0	NA	Intergenic	Intergenic	-481669	NR_045441	75274	Mm.108718	NR_045441	ENSMUSG00000086244	4930558G05Rik	-	RIKEN cDNA 4930558G05 gene	ncRNA
common_peak1-15820-68-73-0.360507413669346-0.92842122850166	chr5	93092885	93093950	+	0	NA	intron (NM_177230, intron 4 of 24)	intron (NM_177230, intron 4 of 24)	10736	NM_177230	320696	Mm.209991	NM_177230	ENSMUSG00000050050	Ccdc158	4932413O14Rik	coiled-coil domain containing 158	protein-coding
unique_peak1-2353-13-1-2.77847203063777-3.64038867156802	chr15	85859604	85860345	+	0	NA	intron (NM_009886, intron 1 of 34)	intron (NM_009886, intron 1 of 34)	4233	NM_009886	12614	Mm.22680	NM_009886	ENSMUSG00000016028	Celsr1	Crsh|Scy|crash	cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog, Drosophila)	protein-coding
common_peak2-28659-9-10--0.269818212233077-1.05503135781948	chr5	31494808	31495295	+	0	NA	promoter-TSS (NM_153680)	promoter-TSS (NM_153680)	461	NM_001127355	13667	Mm.29394	NM_010122	ENSMUSG00000029145	Eif2b4	Eif2b	eukaryotic translation initiation factor 2B, subunit 4 delta	protein-coding
common_peak2-29641-112-126-0.444565613548117-1.91197791628434	chr6	65042393	65043454	+	0	NA	intron (NM_007958, intron 12 of 23)	ID_B1|SINE|B4	49723	NM_001253392	13990	Mm.99113	NM_007958	ENSMUSG00000029920	Smarcad1	AV081750|AW226546|D6Pas1|Etl1|mKIAA1122	SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	protein-coding
common_peak2-27289-44-77--0.463509384293713-0.951659045366392	chr3	58524954	58526104	+	0	NA	intron (NR_045167, intron 2 of 7)	intron (NR_045167, intron 2 of 7)	29018	NR_045167	71301	Mm.254475	NR_045167	ENSMUSG00000097725	4930593A02Rik	4933440I01Rik	RIKEN cDNA 4930593A02 gene	ncRNA
common_peak2-27991-21-23--0.0154732354549205-0.305650498375555	chr4	44233175	44234078	+	0	NA	TTS (NR_039565)	TTS (NR_039565)	513	NR_039565	100628618		NR_039565	miRBase:MI0018014	Mir5106	mmu-mir-5106|mu-mir-5106	microRNA 5106	ncRNA
common_peak1-10081-24-46--0.761378948909921-1.26138754964088	chr13	23570622	23571664	+	0	NA	intron (NM_001289614, intron 6 of 6)	intron (NM_001289614, intron 6 of 6)	9583	NM_001289615	238555	Mm.129668	NM_175938		Btn2a2	Btn2|D030063K05	butyrophilin, subfamily 2, member A2	protein-coding
unique_peak2-35835-8-22--1.51833953810944-1.77631109801764	chr18	67448505	67449307	+	0	NA	promoter-TSS (NM_053261)	promoter-TSS (NM_053261)	29	NM_053261	114663	Mm.34079	NM_053261	ENSMUSG00000024525	Impa2	2210415D20Rik|AI326924|AW259601	inositol (myo)-1(or 4)-monophosphatase 2	protein-coding
unique_peak2-34342-6-18--1.68252940306328-1.66449268468235	chr13	98993782	98994608	+	0	NA	Intergenic	RLTR9C|LTR|ERVK	-18075	NM_012026	110596	Mm.252718	NM_012026	ENSMUSG00000021662	Arhgef28	9230110L08Rik|AI323540|D13Bwg1089e|RIP2|Rgnef|RhoGEF|Rhoip2|p190RhoGEF	Rho guanine nucleotide exchange factor (GEF) 28	protein-coding
common_peak2-24473-35-29-0.524479662853985-0.895935469411238	chr17	24478763	24479406	+	0	NA	intron (NM_001031621, intron 2 of 29)	Lx7|LINE|L1	5113	NM_001031621	381072	Mm.328842	NM_001031621	ENSMUSG00000035435	Abca17	-	ATP-binding cassette, sub-family A (ABC1), member 17	protein-coding
common_peak2-29067-46-103--0.80244377489229-2.79364893869912	chr5	117356629	117358110	+	0	NA	Intergenic	MTA_Mm-int|LTR|MaLR	208633	NM_001122666	71954	Mm.34456	NM_178622	ENSMUSG00000066900	Suds3	2400003N08Rik|2410008L21Rik|AU067672|mSds3	suppressor of defective silencing 3 homolog (S. cerevisiae)	protein-coding
common_peak1-11453-20-12-0.787635066450101-0.949240599462708	chr15	101266802	101267603	+	0	NA	intron (NM_001003668, intron 1 of 8)	intron (NM_001003668, intron 1 of 8)	2033	NM_001003668	406219	Mm.347934	NM_001003668	ENSMUSG00000047641	Krt83	Krt2-25	keratin 83	protein-coding
unique_peak1-5642-9-4-0.867685311516858-1.36011389749466	chr6	24546179	24546731	+	0	NA	Intergenic	L1M4|LINE|L1	-1316	NM_053098	93677	Mm.332941	NM_053098	ENSMUSG00000029683	Lmod2	C-Lmod	leiomodin 2 (cardiac)	protein-coding
common_peak1-8446-7-6--0.00826409175941478-0.97990265578305	chr10	79682530	79683047	+	0	NA	Intergenic	Intergenic	-6555	NM_023431	68114	Mm.273418	NM_023431	ENSMUSG00000020156	Mum1	2610019J09|9430059D04Rik|UBE-1C2	melanoma associated antigen (mutated) 1	protein-coding
common_peak1-8345-17-12-0.517856620063946-0.647240723060192	chr10	52381488	52382081	+	0	NA	Intergenic	Lx3_Mus|LINE|L1	-28523	NM_178675	215085	Mm.338690	NM_178675	ENSMUSG00000038602	Slc35f1	Duf6|E130016L02	solute carrier family 35, member F1	protein-coding
unique_peak1-559-14-4-1.57728806547028-2.4322161449009	chr1	194090124	194090951	+	0	NA	intron (NM_010600, intron 5 of 10)	MTD|LTR|MaLR	75878	NM_010600	16510	Mm.4489	NM_010600	ENSMUSG00000058248	Kcnh1	EAG1|Kv10.1|M-eag	potassium voltage-gated channel, subfamily H (eag-related), member 1	protein-coding
common_peak2-25701-19-29--0.504203268946832-0.580176690544129	chr19	18758504	18759484	+	0	NA	intron (NM_026120, intron 3 of 7)	intron (NM_026120, intron 3 of 7)	13724	NM_026120	67383	Mm.306602	NM_026120	ENSMUSG00000024726	2410127L17Rik	-	RIKEN cDNA 2410127L17 gene	protein-coding
unique_peak1-2670-23-7-1.72176750450908-2.82905316394614	chr16	55636271	55637269	+	0	NA	Intergenic	Intergenic	185481	NM_001159394	80859	Mm.247272	NM_030612	ENSMUSG00000035356	Nfkbiz	AA408868|INAP|Mail	nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta	protein-coding
common_peak2-27406-12-10-0.189344366450341-0.386243247519795	chr3	88488625	88489128	+	0	NA	promoter-TSS (NM_028814)	promoter-TSS (NM_028814)	-840	NM_028814	74200	Mm.251800	NM_028814	ENSMUSG00000028060	2810403A07Rik	A430106P18Rik|AI256352|AI451678|Blom7|Kiaa0907	RIKEN cDNA 2810403A07 gene	protein-coding
common_peak2-19822-16-21--0.341167976369236-0.392630012299441	chr1	89070389	89071310	+	0	NA	Intergenic	Intergenic	-9219	NM_027084	69453	Mm.84618	NM_027084	ENSMUSG00000036480	Prss56	1700027L20Rik	protease, serine 56	protein-coding
common_peak2-19703-65-53-0.737278437313659-2.40371295649053	chr1	63775811	63777630	+	0	NA	promoter-TSS (NM_172422)	promoter-TSS (NM_172422)	172	NM_029696	76668	Mm.30494	NM_029696	ENSMUSG00000025963	Mdh1b	1700124B08Rik|AV255588	malate dehydrogenase 1B, NAD (soluble)	protein-coding
common_peak1-9230-8-32--2.03917170141088-3.64934937127727	chr11	84870334	84870719	+	0	NA	intron (NM_001029934, intron 6 of 33)	intron (NM_001029934, intron 6 of 33)	82931	NM_001029934	237898	Mm.178524	NM_001029934	ENSMUSG00000000804	Usp32	2900074J03Rik|6430526O11Rik|AW045245	ubiquitin specific peptidase 32	protein-coding
common_peak2-31985-24-70--1.35653721673697-4.33910183144977	chr9	70207289	70209132	+	0	NA	intron (NM_181072, intron 18 of 27)	intron (NM_181072, intron 18 of 27)	45350	NR_049200	100885839		NR_049200	miRBase:MI0019195	Mir5626	mmu-mir-5626	microRNA mir-5626	ncRNA
common_peak1-14455-44-43-0.362461215931238-0.728039925316326	chr3	19627641	19629104	+	0	NA	Intergenic	Intergenic	-32976	NM_205769	12918	Mm.290689	NM_205769	ENSMUSG00000049796	Crh	CRF|Gm1347	corticotropin releasing hormone	protein-coding
unique_peak2-35590-8-8--0.164702583494742-1.00793137938329	chr17	75936922	75937356	+	0	NA	3' UTR (NM_133747, exon 8 of 8)	3' UTR (NM_133747, exon 8 of 8)	14147	NM_133747	72722	Mm.24641	NM_133747	ENSMUSG00000002017	Fam98a	2810405J04Rik|AL024114	family with sequence similarity 98, member A	protein-coding
common_peak1-8376-22-11-1.06232160436625-1.51503956548638	chr10	61089152	61089986	+	0	NA	TTS (NM_001177511)	TTS (NM_001177511)	-21800	NM_026438	67895	Mm.28897	NM_026438	ENSMUSG00000020089	Ppa1	2010317E03Rik|Pyp	pyrophosphatase (inorganic) 1	protein-coding
common_peak1-14767-60-82--0.0207475697263932-0.301029995663945	chr3	88491492	88493727	+	0	NA	intron (NM_028814, intron 2 of 13)	B1_Mm|SINE|Alu	2893	NM_028814	74200	Mm.251800	NM_028814	ENSMUSG00000028060	2810403A07Rik	A430106P18Rik|AI256352|AI451678|Blom7|Kiaa0907	RIKEN cDNA 2810403A07 gene	protein-coding
common_peak1-17210-13-9-0.456543935750406-0.53895475198017	chr6	125330606	125331195	+	0	NA	promoter-TSS (NM_198604)	promoter-TSS (NM_198604)	-378	NM_198604	213522	Mm.333396	NM_198604	ENSMUSG00000038167	Plekhg6	BC026778|Gm155	pleckstrin homology domain containing, family G (with RhoGef domain) member 6	protein-coding
common_peak2-25462-8-15--0.994777582052429-0.771068449301683	chr19	4232389	4233142	+	0	NA	exon (NM_027196, exon 3 of 4)	exon (NM_027196, exon 3 of 4)	866	NM_027196	69745	Mm.32518	NM_027196	ENSMUSG00000024854	Pold4	2410012M21Rik|AI463381|AW060307|Polds|p12	polymerase (DNA-directed), delta 4	protein-coding
common_peak2-19797-13-12-0.0780323124966764-0.334470287753051	chr1	87551308	87551877	+	0	NA	intron (NM_013673, intron 1 of 19)	intron (NM_013673, intron 1 of 19)	4967	NM_013673	20684	Mm.290906	NM_013673	ENSMUSG00000026222	Sp100	A430075G10Rik	nuclear antigen Sp100	protein-coding
common_peak2-30980-15-18--0.235762762887929-0.326591483156968	chr8	3424931	3425389	+	0	NA	intron (NM_133962, intron 1 of 19)	PB1D10|SINE|Alu	32152	NM_133962	102098	Mm.170461	NM_133962	ENSMUSG00000004568	Arhgef18	AI467246|D030053O22Rik	rho/rac guanine nucleotide exchange factor (GEF) 18	protein-coding
common_peak1-9342-9-21--1.26981821223308-1.37307999835977	chr11	96064921	96065439	+	0	NA	non-coding (NR_108029, exon 2 of 2)	non-coding (NR_108029, exon 2 of 2)	412	NR_108029	432593	Mm.342467	NR_108029		Gm11538	OTTMUSG00000001983	predicted gene 11538	ncRNA
unique_peak2-39357-6-19--1.75652998450706-1.84350559086818	chr9	6453717	6454725	+	0	NA	Intergenic	Lx6|LINE|L1	-187674	NM_027942	71829	Mm.141452	NM_027942	ENSMUSG00000047619	Ddi1	1700011N24Rik	DDI1, DNA-damage inducible 1, homolog 1 (S. cerevisiae)	protein-coding
unique_peak2-39993-7-22--1.72447112575882-2.07034318903805	chrX	162760368	162761112	+	0	NA	intron (NM_023122, intron 1 of 6)	RSINE1|SINE|B4	-21745	NM_001177958	14758	Mm.222320	NM_023122	ENSMUSG00000031342	Gpm6b	AI593561|Gpm6|M6B	glycoprotein m6b	protein-coding
common_peak1-8928-20-7-1.48807478459119-2.07034318903805	chr11	52097921	52098488	+	0	NA	Intergenic	Intergenic	-2452	NM_009331	21414	Mm.31630	NM_009331	ENSMUSG00000000782	Tcf7	AI465550|TCF-1|Tcf1	transcription factor 7, T cell specific	protein-coding
unique_peak2-35827-9-9--0.132314688483142-1.03275496310833	chr18	65096808	65097357	+	0	NA	intron (NM_001114386, intron 1 of 30)	intron (NM_001114386, intron 1 of 30)	49672	NM_001114386	83814	Mm.98668	NM_031881	ENSMUSG00000024589	Nedd4l	1300012C07Rik|Nedd4-2|Nedd4b	neural precursor cell expressed, developmentally down-regulated gene 4-like	protein-coding
unique_peak2-34415-3-6--1.22133801201688-1.08602067057793	chr14	14294466	14294850	+	0	NA	intron (NM_001163032, intron 1 of 4)	intron (NM_001163032, intron 1 of 4)	8186	NM_001163032	72003	Mm.317515	NM_028052	ENSMUSG00000056296	Synpr	1500003F20Rik|SPO	synaptoporin	protein-coding
unique_peak2-37180-4-6--0.830815435910851-0.989110657569874	chr4	49520492	49520896	+	0	NA	Intergenic	MT2A|LTR|ERVL	-1264	NM_007519	12012	Mm.2859	NM_007519	ENSMUSG00000039653	Baat	AI118337|AI158864|BAT	bile acid-Coenzyme A: amino acid N-acyltransferase	protein-coding
unique_peak1-737-9-5-0.604650905683064-1.21398586181642	chr10	99265108	99265648	+	0	NA	Intergenic	Intergenic	-43086	NM_027945	71832	Mm.483162	NM_027945	ENSMUSG00000046934	Csl	1700007H16Rik	citrate synthase like	protein-coding
common_peak2-23221-23-33--0.365695336741259-0.481798116163913	chr15	4026631	4027676	+	0	NA	intron (NM_024188, intron 7 of 16)	intron (NM_024188, intron 7 of 16)	-49747	NR_028266	414066	Mm.394461	NR_028266		BC037032	-	cDNA Sequence BC037032	ncRNA
common_peak1-8596-14-34--1.23006685658732-1.94354392707378	chr10	111506406	111507216	+	0	NA	intron (NM_027018, intron 2 of 4)	L1_Mur1|LINE|L1	9566	NM_027018	69286	Mm.47058	NM_027018	ENSMUSG00000020213	Glipr1l1	1700011E04Rik	GLI pathogenesis-related 1 like 1	protein-coding
common_peak1-13459-107-141-0.204299813168713-0.678013636639614	chr19	59942679	59944037	+	0	NA	Intergenic	Intergenic	75909	NM_001033172	74998	Mm.24167	NM_001033172	ENSMUSG00000040022	Rab11fip2	4930470G04Rik|A830046J09Rik|AW558126|Nrip11	RAB11 family interacting protein 2 (class I)	protein-coding
common_peak1-13569-49-10-2.54685220438789-9.8496207496751	chr2	7080466	7081745	+	0	NA	intron (NM_001110231, intron 3 of 15)	intron (NM_001110231, intron 3 of 15)	-78757	NM_001160292	14007	Mm.398543	NM_010160	ENSMUSG00000002107	Celf2	B230218O03|B230345P09Rik|C88023|CELF-2|CUG-BP2|Cugbp2|D230046B21Rik|Etr-3|Napor|Napor-2|mETR-3	CUGBP, Elav-like family member 2	protein-coding
common_peak1-17637-10-8-0.186490343566457-1.078512453669	chr7	49317215	49317733	+	0	NA	Intergenic	Intergenic	-3123	NM_001105056	628444	Mm.469901	NM_001105056	ENSMUSG00000092032	Vmn2r59	EG628444	vomeronasal 2, receptor 59	protein-coding
unique_peak1-4053-9-4-0.867685311516858-1.36011389749466	chr2	60672586	60673108	+	0	NA	intron (NM_001141932, intron 2 of 14)	intron (NM_001141932, intron 2 of 14)	46648	NM_001141932	56878	Mm.259667	NM_020296	ENSMUSG00000026970	Rbms1	2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1	RNA binding motif, single stranded interacting protein 1	protein-coding
common_peak1-7874-7-16--1.28837201095215-1.08658567012551	chr1	133950578	133951092	+	0	NA	intron (NM_001114662, intron 3 of 9)	intron (NM_001114662, intron 3 of 9)	13804	NM_172510	213006	Mm.208445	NM_172510	ENSMUSG00000059149	Mfsd4	A230072B04|A930031D07Rik|AI850289	major facilitator superfamily domain containing 4	protein-coding
common_peak1-18968-32-22-0.755530063162647-1.34355844763204	chr9	55136027	55137634	+	0	NA	Intergenic	Intergenic	-5398	NM_032002	83961	Mm.443874	NM_032002	ENSMUSG00000032311	Nrg4	AI552600	neuregulin 4	protein-coding
common_peak2-21961-74-54-0.934526863453947-3.91679597206899	chr12	36381312	36382342	+	0	NA	Intergenic	Intergenic	-2037	NR_045050	71581	Mm.100110	NR_045050		9130015A21Rik	-	RIKEN cDNA 9130015A21 gene	ncRNA
unique_peak2-35828-5-7--0.704380336005853-1.01466476204226	chr18	65495261	65495546	+	0	NA	intron (NM_001037294, intron 4 of 12)	RLTR25A|LTR|ERVK	58139	NM_001037294	225638	Mm.296528	NM_001037294	ENSMUSG00000032845	Alpk2	Gm549|Hak	alpha-kinase 2	protein-coding
unique_peak2-35612-4-5--0.608423014574403-0.909929411522249	chr17	84118689	84119082	+	0	NA	intron (NM_001171053, intron 3 of 13)	B1_Mur4|SINE|Alu	13382	NM_001171052	116871	Mm.277668	NM_054082	ENSMUSG00000055817	Mta3	1110002J22Rik|mKIAA1266	metastasis associated 3	protein-coding
unique_peak2-35580-5-7--0.704380336005853-1.01466476204226	chr17	71552012	71552424	+	0	NA	intron (NM_022882, intron 1 of 19)	intron (NM_022882, intron 1 of 19)	-1776	NM_001164885	64898	Mm.227924	NM_022882	ENSMUSG00000024052	Lpin2	2610511G02Rik|AI481352|AW742896	lipin 2	protein-coding
common_peak2-26804-14-9-0.577288065470282-0.630231561310125	chr2	150218129	150218696	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-29911	NM_027017	69277	Mm.272470	NM_027017	ENSMUSG00000063364	3300002I08Rik	2900016H11Rik	RIKEN cDNA 3300002I08 gene	protein-coding
common_peak1-8364-40-42-0.232710928049-0.490454554604827	chr10	59642852	59644205	+	0	NA	TTS (NM_016803)	TTS (NM_016803)	38480	NM_016803	53374	Mm.12866	NM_016803	ENSMUSG00000057337	Chst3	C6ST|C6ST-1|GST-0	carbohydrate (chondroitin 6/keratan) sulfotransferase 3	protein-coding
common_peak2-30830-12-24--0.995080204687086-1.0220094258199	chr7	131361941	131362696	+	0	NA	intron (NM_001252072, intron 1 of 1)	PB1D7|SINE|Alu	235623	NM_001252072	628779	Mm.40210	NM_001252072	ENSMUSG00000078591	Hs3st4	EG628779|Gm6915	heparan sulfate (glucosamine) 3-O-sulfotransferase 4	protein-coding
common_peak2-21241-6-8--0.60452689106201-1.03789460276074	chr11	68446978	68447494	+	0	NA	Intergenic	B3|SINE|B2	46697	NM_177779	276920	Mm.123046	NM_177779	ENSMUSG00000045915	Ccdc42	A530001H01Rik	coiled-coil domain containing 42	protein-coding
common_peak1-7734-12-11-0.0638134843664826-0.337263207250336	chr1	89070412	89070951	+	0	NA	Intergenic	ID_B1|SINE|B4	-9387	NM_027084	69453	Mm.84618	NM_027084	ENSMUSG00000036480	Prss56	1700027L20Rik	protease, serine 56	protein-coding
unique_peak1-5128-9-4-0.867685311516858-1.36011389749466	chr5	3198317	3198753	+	0	NA	Intergenic	Intergenic	-145777	NM_009873	12571	Mm.31672	NM_009873	ENSMUSG00000040274	Cdk6	5830411I20|AI504062|Crk2	cyclin-dependent kinase 6	protein-coding
common_peak2-24289-16-8-0.948338640825749-1.02063122982878	chr17	5799721	5800223	+	0	NA	non-coding (NR_045079, exon 1 of 3)	non-coding (NR_045079, exon 1 of 3)	482	NR_045080	78512	Mm.23696	NR_045079	ENSMUSG00000096965	3300005D01Rik	-	RIKEN cDNA 3300005D01 gene	ncRNA
common_peak2-27361-12-19--0.673152109799724-0.546772548767014	chr3	83864501	83865140	+	0	NA	Intergenic	Intergenic	-20737	NM_172681	229473	Mm.28838	NM_172681	ENSMUSG00000033767	D930015E06Rik	Kiaa0922|mKIAA0922	RIKEN cDNA D930015E06 gene	protein-coding
unique_peak2-39716-4-7--1.02346051385325-1.09384600808989	chr9	119425611	119426169	+	0	NA	intron (NM_001253860, intron 16 of 26)	intron (NM_001253860, intron 16 of 26)	45906	NM_001253860	20271	Mm.103584	NM_021544	ENSMUSG00000032511	Scn5a	Nav1.5|Nav1.5c|SkM1|SkM2|mH1	sodium channel, voltage-gated, type V, alpha	protein-coding
common_peak2-21551-8-6-0.197867495889966-1.03789460276074	chr11	96076149	96076554	+	0	NA	Intergenic	Intergenic	11583	NR_108029	432593	Mm.342467	NR_108029		Gm11538	OTTMUSG00000001983	predicted gene 11538	ncRNA
unique_peak2-36078-0-6--3.64748585253182-1.56314192529759	chr19	55571374	55571805	+	0	NA	intron (NM_016862, intron 5 of 7)	intron (NM_016862, intron 5 of 7)	181042	NM_001293686	53611	Mm.258637	NM_016862	ENSMUSG00000024983	Vti1a	1110014F16Rik|1110018K19Rik|4921537J05Rik|MVti1|MVti1a|Vti1|Vti1-rp2	vesicle transport through interaction with t-SNAREs 1A	protein-coding
common_peak1-16008-24-25-0.0927701846266249-0.337923771396236	chr5	34513176	34514193	+	0	NA	Intergenic	L2|LINE|L2	-1509	NM_001289804	272158	Mm.319286	NM_181857	ENSMUSG00000045102	Poln	POL4P	DNA polymerase N	protein-coding
unique_peak1-97-8-3-1.00522241794757-1.39487600375387	chr1	51584984	51585508	+	0	NA	Intergenic	MLT1B|LTR|MaLR	-50003	NM_028696	109019	Mm.196290	NM_028696	ENSMUSG00000026107	Nabp1	4930434H03Rik|4930442A21Rik|4930488J04Rik|4933440J18Rik|5830411E10Rik|AI852561|Nbp1|Obfc2a|Ssb2	nucleic acid binding protein 1	protein-coding
common_peak1-15972-13-22--0.745089925419244-0.690311289528838	chr5	31629255	31629889	+	0	NA	3' UTR (NM_144909, exon 19 of 19)	3' UTR (NM_144909, exon 19 of 19)	29618	NM_144909	231103	Mm.100043	NM_144909	ENSMUSG00000059434	Gckr	GKRP	glucokinase regulatory protein	protein-coding
common_peak1-12519-14-33--1.18824668089269-1.80321929531239	chr18	36454007	36454698	+	0	NA	Intergenic	Intergenic	-5403	NM_001267796	109169	Mm.426423	NM_001267796		Igip	6330403M23Rik	IgA inducing protein	protein-coding
common_peak1-7505-89-73-0.825513389197052-3.93170347593117	chr1	16171119	16173761	+	0	NA	Intergenic	Intergenic	76477	NM_133832	98711	Mm.274376	NM_133832		Rdh10	3110069K09Rik|4921506A21Rik|AI875664|AW549993|D1Ertd762e|m366Asp	retinol dehydrogenase 10 (all-trans)	protein-coding
common_peak2-31077-12-11-0.0638134843664826-0.337263207250336	chr8	24554875	24555393	+	0	NA	intron (NM_013834, intron 2 of 2)	intron (NM_013834, intron 2 of 2)	33160	NM_013834	20377	Mm.281691	NM_013834	ENSMUSG00000031548	Sfrp1	2210415K03Rik|AW011917|AW107218|AW742929|sFRP-1	secreted frizzled-related protein 1	protein-coding
common_peak1-7952-6-17--1.60452689106201-1.49151883326343	chr1	153332355	153332850	+	0	NA	intron (NM_011277, intron 1 of 6)	B1_Mus1|SINE|Alu	15351	NM_011277	19821	Mm.474038	NM_011277	ENSMUSG00000026484	Rnf2	AI326319|AI450156|AU019207|Ring1B|dinG	ring finger protein 2	protein-coding
common_peak2-21981-6-6--0.241956811677302-0.947717972411649	chr12	51847867	51848280	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-97863	NM_008858	18760	Mm.133719	NM_008858	ENSMUSG00000002688	Prkd1	PKD|PKD1|Pkcm|Prkcm	protein kinase D1	protein-coding
common_peak1-17421-27-21-0.532114332257938-0.800403172662453	chr7	12478060	12478993	+	0	NA	Intergenic	L1Md_F2|LINE|L1	12834	NM_134207	171241	Mm.377197	NM_134207	ENSMUSG00000043308	Vmn1r75	V1rg6	vomeronasal 1 receptor 75	protein-coding
unique_peak1-393-8-5-0.420259917226415-1.10484139239135	chr1	153487058	153487568	+	0	NA	intron (NM_022018, intron 2 of 13)	PB1D9|SINE|Alu	68810	NM_022018	63913	Mm.157700	NM_022018		Fam129a	AI256368|AU019833|Niban	family with sequence similarity 129, member A	protein-coding
unique_peak2-36463-4-9--1.34538860874061-1.36011389749466	chr2	143088864	143089356	+	0	NA	Intergenic	Intergenic	184882	NM_020595	57329	Mm.157751	NM_020595	ENSMUSG00000027416	Otor	CDRAP|Fdp|MIA|MIAL	otoraplin	protein-coding
unique_peak1-2002-8-3-1.00522241794757-1.39487600375387	chr15	3246870	3247403	+	0	NA	intron (NM_001166063, intron 3 of 8)	L1MC3|LINE|L1	6390	NM_001166063	100039139	Mm.455610	NM_001166063	ENSMUSG00000091119	Ccdc152	ENSMUSG00000071814	coiled-coil domain containing 152	protein-coding
unique_peak1-5141-10-5-0.771452844287613-1.33892459842472	chr5	13526871	13527365	+	0	NA	intron (NM_001243072, intron 7 of 17)	intron (NM_001243072, intron 7 of 17)	127809	NM_009152	20346	Mm.372039	NM_009152	ENSMUSG00000028883	Sema3a	Hsema-I|SEMA1|SemD|Semad|coll-1	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A	protein-coding
unique_peak2-35494-4-10--1.48289213249054-1.5150158574804	chr17	46270301	46270726	+	0	NA	intron (NM_029338, intron 4 of 4)	ID_B1|SINE|B4	10634	NM_029338	75564	Mm.17993	NM_029338	ENSMUSG00000023966	Rsph9	1700027N10Rik	radial spoke head 9 homolog (Chlamydomonas)	protein-coding
common_peak1-10769-25-20-0.469532482566345-0.662033714151238	chr14	70765772	70766768	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-15039	NM_001135151	213053	Mm.270647	NM_144808	ENSMUSG00000022094	Slc39a14	FAD-123|ZIP-14|Zip14|fad123	solute carrier family 39 (zinc transporter), member 14	protein-coding
common_peak2-23367-25-6-2.0544949832875-3.87314773301527	chr15	53266876	53267309	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-89354	NM_010162	14042	Mm.309395	NM_010162		Ext1	AA409028	exostoses (multiple) 1	protein-coding
common_peak2-31594-15-9-0.690236655668294-0.732381977911291	chr8	121631215	121631836	+	0	NA	intron (NM_019707, intron 7 of 13)	intron (NM_019707, intron 7 of 13)	-236913	NM_024219	68196	Mm.358714	NM_024219	ENSMUSG00000031839	Hsbp1	0610007A03Rik|AA408769|Hsp25	heat shock factor binding protein 1	protein-coding
common_peak2-24794-84-191--0.650028441832131-3.63131347308698	chr17	65782422	65784171	+	0	NA	intron (NM_001289485, intron 11 of 15)	RLTR20B3|LTR|ERVK	106826	NM_001008973	381107	Mm.141275	NM_001008973	ENSMUSG00000045036	Tmem232	E130009J12Rik|Gm940|Tes13-L|Tes13-S	transmembrane protein 232	protein-coding
common_peak2-24695-7-12--0.901348887842903-1.31827279259406	chr17	44767760	44768313	+	0	NA	intron (NR_073392, intron 6 of 7)	intron (NR_073392, intron 6 of 7)	105089	NR_073425	12393	Mm.391013	NM_009820	ENSMUSG00000039153	Runx2	AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a	runt related transcription factor 2	protein-coding
unique_peak1-964-15-5-1.4272022498345-1.61682445937017	chr11	61202873	61203626	+	0	NA	Intergenic	Intergenic	-11672	NM_026183	67473	Mm.100741	NM_026183	ENSMUSG00000010122	Slc47a1	1300013J15Rik|AI036982|MATE1|mMATE1	solute carrier family 47, member 1	protein-coding
common_peak2-31264-6-4-0.24347001549294-0.989110657569874	chr8	71312419	71312854	+	0	NA	Intergenic	Intergenic	-5192	NM_001293791	70885	Mm.252421	NM_027590	ENSMUSG00000031864	Ints10	4921521J11Rik|AI462004	integrator complex subunit 10	protein-coding
common_peak1-17133-51-28-1.216942830475-3.88257373983915	chr6	115527843	115529475	+	0	NA	TTS (NM_199033)	TTS (NM_199033)	13935	NM_001101431	70291	Mm.133694	NM_001101431		Mkrn2os	2510049J12Rik	makorin, ring finger protein 2, opposite strand	protein-coding
unique_peak1-6827-10-1-2.35641534500877-2.57096726280955	chr8	79155259	79155784	+	0	NA	Intergenic	Intergenic	268551	NR_028579	100039211	Mm.367571	NR_028579	ENSMUSG00000074235	Gm10649	ENSMUSG00000074235	predicted gene 10649	ncRNA
common_peak2-32222-31-41--0.167078751965637-0.345592563585011	chr9	122865402	122866109	+	0	NA	intron (NM_010620, intron 1 of 34)	RLTR22_Mur|LTR|ERVK	5556	NM_010620	209737	Mm.278920	NM_010620	ENSMUSG00000036768	Kif15	3110023M17Rik|3930402I10Rik|D330038N01|HKLP2|Knsl7|b2b1117.1Clo	kinesin family member 15	protein-coding
unique_peak1-6990-8-1-2.00522241794757-2.05605744720049	chr8	120527232	120527758	+	0	NA	Intergenic	Intergenic	-201666	NM_026758	68533	Mm.181836	NM_026758	ENSMUSG00000031843	Mphosph6	1110001M01Rik|AA536809|C86426	M phase phosphoprotein 6	protein-coding
common_peak1-17179-11-11--0.0762689164695427-0.301029995663976	chr6	122602072	122602590	+	0	NA	Intergenic	Intergenic	25889	NM_139218	73708	Mm.27982	NM_139218	ENSMUSG00000046323	Dppa3	2410075G02Rik|PCG7|PGC7|Stella	developmental pluripotency-associated 3	protein-coding
unique_peak2-34755-0-7--3.84013093047421-1.80617997398389	chr15	56040091	56040447	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-301765	NM_016667	20649	Mm.309425	NM_016667	ENSMUSG00000060429	Sntb1	-	syntrophin, basic 1	protein-coding
unique_peak2-39610-5-10--1.16381195464315-1.33892459842472	chr9	85750080	85750462	+	0	NA	Intergenic	Intergenic	13812	NM_001164792	21983	Mm.20864	NM_011627	ENSMUSG00000035274	Tpbg	5T4|AW495680|WAIF1	trophoblast glycoprotein	protein-coding
unique_peak2-35441-4-6--0.830815435910851-0.989110657569874	chr17	35121714	35122098	+	0	NA	intron (NM_001204274, intron 2 of 4)	intron (NM_001204274, intron 2 of 4)	2831	NM_030597	27756	Mm.165735	NM_030597	ENSMUSG00000007050	Lsm2	D17H6S56E-2|D17H6S56E2|Dmapl|Dmpkap|G7b|Sm-X5|SmX5|snRNP	LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	protein-coding
common_peak2-29805-14-9-0.577288065470282-0.630231561310125	chr6	91076960	91077617	+	0	NA	Intergenic	Intergenic	-10468	NM_018815	54563	Mm.28162	NM_018815	ENSMUSG00000030091	Nup210	9830001L10|AI836801|Pom210|gp190|gp210	nucleoporin 210	protein-coding
unique_peak2-37315-12-28--1.20920501003993-1.52081014994907	chr4	126046636	126047558	+	0	NA	intron (NM_153402, intron 9 of 18)	Lx2B|LINE|L1	-44654	NM_011902	24084	Mm.23895	NM_011902	ENSMUSG00000028845	Tekt2	AU014974|tektin-t	tektin 2	protein-coding
common_peak1-12880-41-24-1.05729251507394-2.59472032287452	chr18	77943800	77945253	+	0	NA	intron (NM_178670, intron 1 of 4)	B3A|SINE|B2	8223	NM_178670	212163	Mm.23293	NM_178670	ENSMUSG00000047466	8030462N17Rik	Akd2|Ark2N	RIKEN cDNA 8030462N17 gene	protein-coding
unique_peak1-3597-27-11-1.40658345017408-2.62629506227042	chr19	32179624	32180738	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-2551	NM_018830	54447	Mm.491229	NM_018830	ENSMUSG00000024887	Asah2	AI585898	N-acylsphingosine amidohydrolase 2	protein-coding
common_peak2-30337-13-16--0.30899081061257-0.330004445983672	chr7	25376263	25377231	+	0	NA	intron (NM_023154, intron 1 of 7)	intron (NM_023154, intron 1 of 7)	-4087	NM_001033205	101544	Mm.20117	NM_001033205	ENSMUSG00000066721	Zfp575	AI326876|Znf575	zinc finger protein 575	protein-coding
unique_peak2-36459-2-6--1.72480917832092-1.26211192963361	chr2	141800963	141801496	+	0	NA	intron (NM_001013802, intron 8 of 18)	RMER1A|Other|Other	925971	NM_001081133	16558	Mm.251934	NM_001081133	ENSMUSG00000038844	Kif16b	8430434E15Rik|AA623607|AI789011|C80253|C80902|mKIAA1590	kinesin family member 16B	protein-coding
unique_peak2-35493-0-6--3.64748585253182-1.56314192529759	chr17	46268827	46269272	+	0	NA	intron (NM_029338, intron 4 of 4)	intron (NM_029338, intron 4 of 4)	12098	NM_029338	75564	Mm.17993	NM_029338	ENSMUSG00000023966	Rsph9	1700027N10Rik	radial spoke head 9 homolog (Chlamydomonas)	protein-coding
common_peak1-15839-32-28-0.421111024092088-0.694972475810963	chr5	146701770	146703183	+	0	NA	Intergenic	L1Md_A|LINE|L1	-11046	NM_007818	13112	Mm.332844	NM_007818	ENSMUSG00000056035	Cyp3a11	AI256190|Cyp3a|IIIAm1|Pcn	cytochrome P450, family 3, subfamily a, polypeptide 11	protein-coding
common_peak2-21615-10-8-0.186490343566457-1.078512453669	chr11	100440652	100441046	+	0	NA	intron (NM_001146318, intron 2 of 2)	intron (NM_001146318, intron 2 of 2)	3644	NM_001146318	12799	Mm.15711	NM_009923	ENSMUSG00000006782	Cnp	CNPase|Cnp-1|Cnp1	2',3'-cyclic nucleotide 3' phosphodiesterase	protein-coding
common_peak2-24598-11-24--1.13516260552311-1.3750876294627	chr17	32320209	32321119	+	0	NA	TTS (NM_001033163)	TTS (NM_001033163)	5744	NM_001033163	71932	Mm.176240	NM_001033163	ENSMUSG00000037577	Ephx3	2310063B19Rik|Abhd9	epoxide hydrolase 3	protein-coding
common_peak2-22506-7-9--0.522837264589173-1.05908390183068	chr13	52892267	52892688	+	0	NA	Intergenic	Intergenic	-39903	NR_027893	105404	Mm.184173	NR_027893		BB123696	-	expressed sequence BB123696	ncRNA
unique_peak2-36406-3-5--0.998945590680433-0.96108193396963	chr2	126309470	126309854	+	0	NA	intron (NM_001080944, intron 2 of 27)	intron (NM_001080944, intron 2 of 27)	7627	NM_001080944	241633	Mm.222235	NM_001080944	ENSMUSG00000060131	Atp8b4	A530043E15|Im	ATPase, class I, type 8B, member 4	protein-coding
common_peak1-12855-15-30--0.942031559831219-1.24110690293937	chr18	75325409	75326133	+	0	NA	intron (NM_027727, intron 13 of 16)	intron (NM_027727, intron 13 of 16)	131200	NR_045394	100503117	Mm.250517	NR_045393		2010010A06Rik	5033420E22Rik	RIKEN cDNA 2010010A06 gene	ncRNA
common_peak2-27302-23-29--0.185123091099438-0.336580821310529	chr3	61362766	61363637	+	0	NA	Intergenic	L1_Mur3|LINE|L1	194772	NM_028712	74012	Mm.422674	NM_028712	ENSMUSG00000036894	Rap2b	4021402C18Rik|AA408554	RAP2B, member of RAS oncogene family	protein-coding
common_peak2-25346-10-5-0.771452844287613-1.33892459842472	chr18	79003779	79004122	+	0	NA	intron (NM_053099, intron 4 of 5)	(GA)n|Simple_repeat|Simple_repeat	-210261	NM_030683	27411	Mm.44158	NM_030683	ENSMUSG00000024552	Slc14a2	UT-A1|UT-A3	solute carrier family 14 (urea transporter), member 2	protein-coding
unique_peak2-39981-3-6--1.22133801201688-1.08602067057793	chrX	153666393	153666766	+	0	NA	intron (NM_011077, intron 14 of 21)	intron (NM_011077, intron 14 of 21)	186639	NM_011077	18675	Mm.2529	NM_011077	ENSMUSG00000057457	Phex	Gy|HPDR|HPDR1|Hyp|PEX	phosphate regulating endopeptidase homolog, X-linked	protein-coding
common_peak2-29905-23-28--0.136213490618491-0.317118655902079	chr6	113695759	113696888	+	0	NA	3' UTR (NM_009723, exon 22 of 22)	3' UTR (NM_009723, exon 22 of 22)	-5648	NM_024206	110379	Mm.29296	NM_024206	ENSMUSG00000030298	Sec13	1110003H02Rik|Sec13l1|Sec13r	SEC13 homolog (S. cerevisiae)	protein-coding
common_peak2-21853-13-14--0.12841856497075-0.301029995663977	chr11	121701506	121702360	+	0	NA	intron (NM_029049, intron 3 of 3)	RLTR31_Mm|LTR|ERVK	10401	NM_029049	74675	Mm.61213	NM_029049	ENSMUSG00000039198	Ptchd3	4930451E13Rik|4933440L20Rik|RNDEu-3	patched domain containing 3	protein-coding
common_peak1-16314-17-9-0.896368243317676-1.09394599973099	chr5	115118963	115119605	+	0	NA	TTS (NM_019821)	TTS (NM_019821)	-10854	NM_022017	63873	Mm.266450	NM_022017	ENSMUSG00000014158	Trpv4	0610033B08Rik|OTRPC4|Trp12|VR-OAC|VRL-2|VROAC	transient receptor potential cation channel, subfamily V, member 4	protein-coding
unique_peak1-7117-8-3-1.00522241794757-1.39487600375387	chr9	45843780	45844238	+	0	NA	intron (NM_027498, intron 1 of 24)	intron (NM_027498, intron 1 of 24)	23106	NM_027498	70661	Mm.219459	NM_027498	ENSMUSG00000034135	Sik3	5730525O22Rik|9030204A07Rik|AI447252|AI846254|AI849445|Qsk|SIK-3|mKIAA0999	SIK family kinase 3	protein-coding
common_peak2-28458-10-7-0.356415345008769-1.12966497611638	chr4	151861066	151861451	+	0	NA	intron (NM_153424, intron 2 of 29)	intron (NM_153424, intron 2 of 29)	9007	NM_153424	260305	Mm.302496	NM_153424	ENSMUSG00000039577	Nphp4	4930564O18Rik|nmf192	nephronophthisis 4 (juvenile) homolog (human)	protein-coding
common_peak1-7512-9-10--0.269818212233077-1.05503135781948	chr1	16687704	16688178	+	0	NA	intron (NM_001159711, intron 2 of 4)	B1_Mur1|SINE|Alu	9404	NM_016923	17087	Mm.116844	NM_016923	ENSMUSG00000025779	Ly96	ESOP-1|MD-2|MD2	lymphocyte antigen 96	protein-coding
common_peak2-25716-20-26--0.266812717572275-0.373496418836697	chr19	21945782	21946570	+	0	NA	Intergenic	Intergenic	93346	NM_031997	83921	Mm.329776	NM_031997	ENSMUSG00000024754	Tmem2	-	transmembrane protein 2	protein-coding
unique_peak2-37321-9-22--1.33394854965279-1.52222891542741	chr4	126320940	126321841	+	0	NA	Intergenic	Intergenic	-33497	NM_011970	26445	Mm.22233	NM_011970	ENSMUSG00000028837	Psmb2	AU045357|AW108089|C7-I|D4Wsu33e|HC7-I	proteasome (prosome, macropain) subunit, beta type 2	protein-coding
unique_peak1-4773-10-1-2.35641534500877-2.57096726280955	chr3	123074805	123075442	+	0	NA	intron (NM_201638, intron 9 of 10)	intron (NM_201638, intron 9 of 10)	13785	NM_201638	210529	Mm.260039	NM_201638	ENSMUSG00000028114	Mettl14	G430022H21Rik|mKIAA1627	methyltransferase like 14	protein-coding
common_peak1-12302-9-10--0.269818212233077-1.05503135781948	chr17	46704583	46705018	+	0	NA	intron (NM_175168, intron 18 of 19)	intron (NM_175168, intron 18 of 19)	-11689	NM_020493	20807	Mm.45044	NM_020493	ENSMUSG00000015605	Srf	AW049942|AW240594	serum response factor	protein-coding
unique_peak2-39358-3-7--1.41398308995928-1.23214870625617	chr9	6644771	6645169	+	0	NA	Intergenic	RMER2|LTR|ERV1	-378423	NM_027942	71829	Mm.141452	NM_027942	ENSMUSG00000047619	Ddi1	1700011N24Rik	DDI1, DNA-damage inducible 1, homolog 1 (S. cerevisiae)	protein-coding
unique_peak2-38734-2-4--1.23938235115068-0.931118710592187	chr7	112534111	112534473	+	0	NA	intron (NM_001242363, intron 7 of 12)	intron (NM_001242363, intron 7 of 12)	10680	NM_001195727	100503879	Mm.380109	NM_001195727	ENSMUSG00000078611	Gm5901	EG545989	predicted gene 5901	protein-coding
common_peak2-31825-14-8-0.729291158915332-0.771068449301682	chr9	44267730	44268179	+	0	NA	Intergenic	Intergenic	-5104	NM_009476	22269	Mm.4453	NM_009476	ENSMUSG00000041523	Upk2	AW491716|UPII	uroplakin 2	protein-coding
common_peak1-16829-26-34--0.201383924786504-0.35535220421655	chr6	50395391	50396401	+	0	NA	intron (NM_001163645, intron 1 of 21)	intron (NM_001163645, intron 1 of 21)	10273	NM_001163645	71720	Mm.44153	NM_027881	ENSMUSG00000029822	Osbpl3	1200014M06Rik|6720421I08Rik|A530055M08|ORP3|OSBP3	oxysterol binding protein-like 3	protein-coding
unique_peak1-3210-8-2-1.42025991722641-1.65811743852845	chr18	57085253	57085754	+	0	NA	promoter-TSS (NM_177115)	promoter-TSS (NM_177115)	-301	NM_177115	320253	Mm.312623	NM_177115	ENSMUSG00000032656	March3	6330411I15Rik|A530081L18Rik|AI843639|MARCH-III	membrane-associated ring finger (C3HC4) 3	protein-coding
unique_peak1-626-8-2-1.42025991722641-1.65811743852845	chr10	27982887	27983374	+	0	NA	intron (NM_008983, intron 2 of 31)	intron (NM_008983, intron 2 of 31)	188504	NM_008983	19272	Mm.332303	NM_008983	ENSMUSG00000019889	Ptprk	AI853699|PTPk|RPTPkappa	protein tyrosine phosphatase, receptor type, K	protein-coding
common_peak2-20568-20-23--0.0968877161299631-0.305855887145851	chr10	76032565	76033215	+	0	NA	TTS (NM_029661)	TTS (NM_029661)	-5503	NM_080845	14317	Mm.36278	NM_080845	ENSMUSG00000001155	Ftcd	-	formiminotransferase cyclodeaminase	protein-coding
common_peak2-27732-22-50--1.02514123688409-2.14568534968695	chr3	123677683	123679836	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-284989	NR_121616	83398	Mm.443908	NM_031186	ENSMUSG00000027977	Ndst3	4921531K01Rik|4930511P15Rik|N-HSST 3|NDST-3	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	protein-coding
unique_peak1-1027-24-1-3.79320990276772-7.14178280843185	chr11	75765030	75765626	+	0	NA	Intergenic	Intergenic	-25935	NM_001291159	380714	Mm.425697	NM_029548	ENSMUSG00000020847	Rph3al	Gm1753|Noc2	rabphilin 3A-like (without C2 domains)	protein-coding
unique_peak2-39092-6-9--0.75652998450706-1.11707584880836	chr8	76900552	76901126	+	0	NA	Intergenic	Intergenic	-496234	NM_027837	71597	Mm.158735	NM_027837	ENSMUSG00000031621	Isx	9130012O13Rik|Pix-1	intestine specific homeobox	protein-coding
common_peak1-7722-14-16--0.188246680892695-0.308035960714963	chr1	88427969	88428556	+	0	NA	TTS (NM_008972)	TTS (NM_008972)	4951	NM_008972	19231	Mm.19187	NM_008972	ENSMUSG00000026238	Ptma	Thym	prothymosin alpha	protein-coding
unique_peak2-37071-4-6--0.830815435910851-0.989110657569874	chr3	145923673	145924040	+	0	NA	intron (NM_022983, intron 2 of 2)	intron (NM_022983, intron 2 of 2)	39931	NM_022983	65086	Mm.155520	NM_022983	ENSMUSG00000036832	Lpar3	Edg7|lpA3	lysophosphatidic acid receptor 3	protein-coding
common_peak2-26762-25-18-0.613922391901521-0.86528749982161	chr2	140759229	140760024	+	0	NA	intron (NM_001013802, intron 4 of 18)	intron (NM_001013802, intron 4 of 18)	-262414	NM_178382	71436	Mm.426781	NM_178382	ENSMUSG00000051379	Flrt3	5530600M07Rik|C430047I10Rik|mKIAA1469	fibronectin leucine rich transmembrane protein 3	protein-coding
unique_peak2-38346-0-8--4.01005593191652-2.05605744720049	chr7	127254493	127254759	+	0	NA	intron (NM_145586, intron 2 of 4)	intron (NM_145586, intron 2 of 4)	8686	NM_145586	233806	Mm.257952	NM_145586	ENSMUSG00000030917	Tmem159	8430420C20Rik	transmembrane protein 159	protein-coding
common_peak2-20352-7-11--0.785871670422967-1.21681515183528	chr10	8899427	8899809	+	0	NA	Intergenic	Intergenic	-293750	NM_175155	70097	Mm.338275	NM_175155	ENSMUSG00000015305	Sash1	1100001C18Rik|2500002E12Rik|A330076K04Rik|mKIAA0790	SAM and SH3 domain containing 1	protein-coding
unique_peak1-4971-17-10-0.75886471956774-0.917676348953458	chr4	107011399	107012382	+	0	NA	intron (NM_001205156, intron 4 of 8)	intron (NM_001205156, intron 4 of 8)	24922	NM_001205156	230584	Mm.29118	NM_145550	ENSMUSG00000057375	Yipf1	C030002N13Rik	Yip1 domain family, member 1	protein-coding
unique_peak2-39910-6-16--1.52206473087004-1.32521814697968	chrX	98938158	98938632	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-8909	NM_009910	12766	Mm.12876	NM_009910	ENSMUSG00000050232	Cxcr3	Cd183|Cmkar3	chemokine (C-X-C motif) receptor 3	protein-coding
unique_peak1-6723-9-4-0.867685311516858-1.36011389749466	chr8	41473368	41473880	+	0	NA	Intergenic	Intergenic	-35545	NM_178395	70546	Mm.34326	NM_178395		Zdhhc2	5730415P04Rik|6430583A19Rik	zinc finger, DHHC domain containing 2	protein-coding
common_peak1-8800-9-11--0.395349094316936-0.344532117358383	chr11	20455383	20455874	+	0	NA	intron (NM_021372, intron 1 of 1)	intron (NM_021372, intron 1 of 1)	12372	NM_021372	58172	Mm.339676	NM_021372	ENSMUSG00000049800	Sertad2	AB041541|AU021878|Kiaa0127|SEI-2|Sei2|TRIP-Br2|mKIAA0127	SERTA domain containing 2	protein-coding
unique_peak1-1729-19-4-2.08075923177432-3.05312482518673	chr13	98819308	98820130	+	0	NA	intron (NM_012026, intron 6 of 35)	intron (NM_012026, intron 6 of 35)	156401	NM_012026	110596	Mm.252718	NM_012026	ENSMUSG00000021662	Arhgef28	9230110L08Rik|AI323540|D13Bwg1089e|RIP2|Rgnef|RhoGEF|Rhoip2|p190RhoGEF	Rho guanine nucleotide exchange factor (GEF) 28	protein-coding
unique_peak1-4941-10-1-2.35641534500877-2.57096726280955	chr4	86612194	86612752	+	0	NA	Intergenic	IAPEY3_LTR|LTR|ERVK	92155	NM_139306	230379	Mm.45019	NM_139306	ENSMUSG00000038007	Acer2	2410116I05Rik|Asah3l|CRG-L1|maCER2	alkaline ceramidase 2	protein-coding
common_peak2-20691-32-35-0.109167017777348-0.348003640999429	chr10	91170794	91171617	+	0	NA	Intergenic	Intergenic	363725	NR_029812	723955		NR_029812	miRBase:MI0000715	Mir135a-2	Mirn135a-2	microRNA 135a-2	ncRNA
unique_peak1-4273-8-0-3.00522241794757-2.70926996097583	chr2	136598651	136599164	+	0	NA	intron (NM_011428, intron 5 of 7)	intron (NM_011428, intron 5 of 7)	59721	NM_001291056	20614	Mm.45953	NM_011428	ENSMUSG00000027273	Snap25	Bdr|GENA70|SNAP-25|SUP|sp	synaptosomal-associated protein 25	protein-coding
unique_peak1-6818-11-0-3.50869358425161-3.61235994796777	chr8	74874258	74874876	+	0	NA	intron (NM_007944, intron 22 of 23)	(TAA)n|Simple_repeat|Simple_repeat	31606	NM_008452	16598	Mm.26938	NM_008452	ENSMUSG00000055148	Klf2	Lklf	Kruppel-like factor 2 (lung)	protein-coding
unique_peak2-36074-7-8--0.370834171144123-1.00793137938329	chr19	54984925	54985373	+	0	NA	Intergenic	Intergenic	188788	NM_008149	14732	Mm.210196	NM_008149	ENSMUSG00000024978	Gpam	GPAT|GPAT1	glycerol-3-phosphate acyltransferase, mitochondrial	protein-coding
common_peak2-23047-10-8-0.186490343566457-1.078512453669	chr14	69911308	69911651	+	0	NA	intron (NM_173420, intron 1 of 2)	intron (NM_173420, intron 1 of 2)	877	NM_173420	239167	Mm.259889	NM_173420		Synb	D930020E02Rik|syncytin-B	syncytin b	protein-coding
unique_peak2-37172-5-9--1.02630843089322-1.21398586181642	chr4	46461570	46462043	+	0	NA	Intergenic	Intergenic	-2183	NM_130889	67628	Mm.263913	NM_130889	ENSMUSG00000028333	Anp32b	2410015B15Rik|PAL31|PHAPI2a|Ssp29	acidic (leucine-rich) nuclear phosphoprotein 32 family, member B	protein-coding
unique_peak2-36655-5-9--1.02630843089322-1.21398586181642	chr3	19629158	19629510	+	0	NA	Intergenic	Intergenic	-33938	NM_205769	12918	Mm.290689	NM_205769	ENSMUSG00000049796	Crh	CRF|Gm1347	corticotropin releasing hormone	protein-coding
unique_peak1-3800-10-3-1.35641534500877-1.75805390616669	chr19	59891134	59891640	+	0	NA	Intergenic	L1Md_A|LINE|L1	127880	NM_001033172	74998	Mm.24167	NM_001033172	ENSMUSG00000040022	Rab11fip2	4930470G04Rik|A830046J09Rik|AW558126|Nrip11	RAB11 family interacting protein 2 (class I)	protein-coding
common_peak2-20175-7-16--1.28837201095215-1.08658567012551	chr1	171345605	171346074	+	0	NA	Intergenic	Intergenic	115756	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
common_peak2-30333-12-22--0.874785970969374-0.809260849721102	chr7	25249015	25250175	+	0	NA	intron (NM_011113, intron 1 of 6)	BC1_Mm|scRNA|scRNA	2076	NM_011113	18793	Mm.1359	NM_011113	ENSMUSG00000046223	Plaur	Cd87|u-PAR|uPAR	plasminogen activator, urokinase receptor	protein-coding
unique_peak2-38159-6-7--0.434601889619698-0.97990265578305	chr6	87219115	87219528	+	0	NA	intron (NM_054041, intron 8 of 17)	intron (NM_054041, intron 8 of 17)	66448	NM_054041	69538	Mm.232525	NM_054041	ENSMUSG00000033420	Antxr1	2310008J16Rik|2810405N18Rik|Antrx1|Tem8	anthrax toxin receptor 1	protein-coding
unique_peak1-5641-18-1-3.31291915122835-4.8766546284749	chr6	23079563	23080426	+	0	NA	intron (NM_013930, intron 1 of 23)	intron (NM_013930, intron 1 of 23)	2992	NM_013930	30956	Mm.18651	NM_013930	ENSMUSG00000029695	Aass	LKR|LKR/SDH|LOR|LOR/SDH|Lorsdh|SDH	aminoadipate-semialdehyde synthase	protein-coding
common_peak2-26093-79-65-0.784441047818166-3.25122790825921	chr2	168229841	168231141	+	0	NA	Intergenic	Intergenic	-135660	NM_001081134	241794	Mm.425102	NM_001081134	ENSMUSG00000074575	Kcng1	AW536275|OTTMUSG00000016048	potassium voltage-gated channel, subfamily G, member 1	protein-coding
common_peak1-19161-12-12--0.0516637330534535-0.309718203022949	chr9	95801719	95802385	+	0	NA	intron (NM_019864, intron 23 of 46)	intron (NM_019864, intron 23 of 46)	-43751	NM_001271569	73410	Mm.443314	NM_028533		1700065D16Rik	-	RIKEN cDNA 1700065D16 gene	protein-coding
common_peak1-18994-12-9-0.326847890200276-0.459837087125828	chr9	57805005	57805596	+	0	NA	intron (NM_011352, intron 9 of 13)	intron (NM_011352, intron 9 of 13)	17358	NM_011352	20361	Mm.335187	NM_011352	ENSMUSG00000038264	Sema7a	2900057C09Rik|CDw108|H-Sema-L|M-Sema-L|Semal	sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A	protein-coding
unique_peak2-36533-3-8--1.58390809140159-1.39487600375387	chr2	163820697	163821153	+	0	NA	promoter-TSS (NM_018753)	promoter-TSS (NM_018753)	-8	NM_018753	54401	Mm.34319	NM_018753	ENSMUSG00000018326	Ywhab	1300003C17Rik	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide	protein-coding
common_peak1-10539-60-101--0.318133480350964-0.730164429015626	chr14	16364821	16366180	+	0	NA	Intergenic	Intergenic	-93999	NM_146052	218763	Mm.138039	NM_146052	ENSMUSG00000045201	Lrrc3b	BC019794|LRP15	leucine rich repeat containing 3B	protein-coding
unique_peak2-36709-7-9--0.522837264589173-1.05908390183068	chr3	51552938	51553333	+	0	NA	intron (NM_001004176, intron 2 of 4)	intron (NM_001004176, intron 2 of 4)	88020	NM_174995	211666	Mm.24679	NM_174995	ENSMUSG00000074604	Mgst2	GST2|MGST-II	microsomal glutathione S-transferase 2	protein-coding
common_peak1-16823-35-42-0.00510550376040619-0.30358472802154	chr6	48554058	48555451	+	0	NA	Intergenic	Intergenic	-8425	NM_173429	243372	Mm.435190	NM_173429	ENSMUSG00000007216	Zfp775	C130032F08Rik|Znf775	zinc finger protein 775	protein-coding
common_peak1-17978-39-44-0.123908150589479-0.359431063687663	chr7	133123617	133125115	+	0	NA	intron (NM_001101488, intron 2 of 6)	intron (NM_001101488, intron 2 of 6)	101559	NM_001101488	269994	Mm.39599	NM_001101488	ENSMUSG00000046182	Gsg1l	AI852434|C230098I05Rik|G630023A01Rik|Gm637|g1l	GSG1-like	protein-coding
common_peak2-31270-7-6--0.00826409175941478-0.97990265578305	chr8	71476362	71476767	+	0	NA	Intergenic	RSINE1|SINE|B4	72110	NM_008509	16956	Mm.1514	NM_008509	ENSMUSG00000015568	Lpl	-	lipoprotein lipase	protein-coding
unique_peak2-36402-1-4--1.94898510510411-1.10720996964787	chr2	125160582	125160985	+	0	NA	intron (NM_007993, intron 45 of 65)	(TCC)n|Simple_repeat|Simple_repeat	87532	NM_023595	110074	Mm.282499	NM_023595	ENSMUSG00000027203	Dut	5031412I06Rik|5133400F09Rik|D2Bwg0749e|Dutp|dUTPase	deoxyuridine triphosphatase	protein-coding
common_peak2-28882-14-16--0.188246680892695-0.308035960714963	chr5	86172189	86172988	+	0	NA	Intergenic	Intergenic	322020	NM_007683	12617	Mm.4649	NM_007683	ENSMUSG00000029253	Cenpc1	CENP-C|Cenpc	centromere protein C1	protein-coding
common_peak1-19177-11-9-0.186765489364251-0.344532117358383	chr9	96952157	96952679	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-33644	NM_145134	211949	Mm.491271	NM_145134	ENSMUSG00000046997	Spsb4	D030068E18Rik|SSB-4|Ssb4	splA/ryanodine receptor domain and SOCS box containing 4	protein-coding
common_peak1-9011-21-13-0.762134343208631-1.0220094258199	chr11	60698539	60699370	+	0	NA	Intergenic	B3|SINE|B2	-6414	NM_001168507	216821	Mm.28063	NM_173453	ENSMUSG00000043284	Tmem11	5730466P16Rik|AA409091	transmembrane protein 11	protein-coding
common_peak2-29614-6-9--0.75652998450706-1.11707584880836	chr6	54163304	54163761	+	0	NA	intron (NM_001163640, intron 3 of 12)	CT-rich|Low_complexity|Low_complexity	-59284	NM_023543	69993	Mm.321147	NM_023543	ENSMUSG00000004633	Chn2	1700026N20Rik|4930557O16Rik|ARHGAP3|Bch	chimerin 2	protein-coding
common_peak2-20380-27-57--0.866435044232336-1.84665509793009	chr10	18055519	18056328	+	0	NA	Intergenic	Intergenic	-71558	NM_173390	215819	Mm.297971	NM_173390	ENSMUSG00000039835	Nhsl1	5730409E15Rik|A630035H13Rik|A730096F01|BC013565|D10Bwg0940e|mKIAA1357	NHS-like 1	protein-coding
common_peak1-13455-25-14-0.954959309736587-1.46151065785802	chr19	58105362	58106221	+	0	NA	intron (NM_181415, intron 27 of 28)	intron (NM_181415, intron 27 of 28)	-19866	NR_049196	100885835		NR_049196		Mir5623	mmu-mir-5623	microRNA mir-5623	ncRNA
unique_peak1-3474-28-5-2.46799661910031-5.31420319710686	chr19	10136953	10138023	+	0	NA	Intergenic	Intergenic	21450	NM_021890	60527	Mm.253875	NM_021890	ENSMUSG00000024664	Fads3	AI464531	fatty acid desaturase 3	protein-coding
common_peak2-20419-14-15--0.100783839642355-0.301029995663982	chr10	26012882	26013621	+	0	NA	intron (NM_172787, intron 17 of 21)	intron (NM_172787, intron 17 of 21)	63738	NM_001115154	268288	Mm.213322	NM_001013766	ENSMUSG00000051354	Samd3	Gm623	sterile alpha motif domain containing 3	protein-coding
unique_peak1-2365-9-4-0.867685311516858-1.36011389749466	chr15	88758861	88759346	+	0	NA	intron (NM_172818, intron 7 of 11)	B1_Mur2|SINE|Alu	25745	NM_172818	239591	Mm.86807	NM_172818	ENSMUSG00000022388	Ttll8	1700019P01Rik|4933401B17	tubulin tyrosine ligase-like family, member 8	protein-coding
common_peak1-19163-8-27--1.80213250411003-2.66623981987189	chr9	95826523	95827015	+	0	NA	intron (NM_019864, intron 34 of 46)	L1_Mus3|LINE|L1	-28410	NM_011916	24127	Mm.291179	NM_011916	ENSMUSG00000032410	Xrn1	Dhm2|exo|mXrn1	5'-3' exoribonuclease 1	protein-coding
unique_peak2-34307-10-18--0.891512168434816-0.804350088532826	chr13	91173090	91174180	+	0	NA	intron (NM_025770, intron 4 of 7)	intron (NM_025770, intron 4 of 7)	110908	NM_024175	66475	Mm.306302	NM_024175		Rps23	2410044J15Rik	ribosomal protein S23	protein-coding
common_peak2-28207-13-11-0.193509529916613-0.379391706698377	chr4	117210440	117210874	+	0	NA	Intergenic	Intergenic	-12272	NM_001285902	140546	Mm.235891	NM_080469	ENSMUSG00000033423	Eri3	PINT1|Prnpip1	exoribonuclease 3	protein-coding
unique_peak1-6712-8-2-1.42025991722641-1.65811743852845	chr8	35912062	35912468	+	0	NA	exon (NM_175091, exon 18 of 27)	exon (NM_175091, exon 18 of 27)	41601	NM_176933	319520	Mm.170276	NM_176933	ENSMUSG00000031530	Dusp4	2700078F24Rik|AI844617|BB104621|E130306H24Rik|MKP2	dual specificity phosphatase 4	protein-coding
unique_peak2-38447-4-7--1.02346051385325-1.09384600808989	chr7	28311607	28312010	+	0	NA	intron (NM_001033315, intron 1 of 3)	intron (NM_001033315, intron 1 of 3)	3528	NM_001033315	233020	Mm.429716	NM_001033315	ENSMUSG00000040424	Hipk4	Gm162	homeodomain interacting protein kinase 4	protein-coding
common_peak2-20061-12-10-0.189344366450341-0.386243247519795	chr1	151693039	151693592	+	0	NA	intron (NM_008869, intron 15 of 17)	Lx9|LINE|L1	115099	NM_008869	18783	Mm.4186	NM_008869	ENSMUSG00000056220	Pla2g4a	Pla2g4|cPLA2|cPLA2alpha	phospholipase A2, group IVA (cytosolic, calcium-dependent)	protein-coding
common_peak1-18045-8-8--0.164702583494742-1.00793137938329	chr7	144756160	144756686	+	0	NA	Intergenic	Intergenic	127066	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
unique_peak2-33721-7-10--0.660340788339108-1.12966497611638	chr11	113734636	113735192	+	0	NA	intron (NM_172800, intron 6 of 44)	intron (NM_172800, intron 6 of 44)	-121785	NM_001163346	56699	Mm.293378	NM_020006	ENSMUSG00000041598	Cdc42ep4	1500041M20Rik|Borg4|CEP4	CDC42 effector protein (Rho GTPase binding) 4	protein-coding
common_peak2-21802-7-6--0.00826409175941478-0.97990265578305	chr11	118365406	118365810	+	0	NA	intron (NM_001285438, intron 5 of 13)	intron (NM_001285438, intron 5 of 13)	27334	NM_172573	217364	Mm.473963	NM_172573	ENSMUSG00000033857	Engase	C130099A03|D230014K01Rik	endo-beta-N-acetylglucosaminidase	protein-coding
unique_peak2-38057-44-101--0.85053250740296-2.99727509715319	chr6	47654129	47656441	+	0	NA	Intergenic	Intergenic	-19910	NR_002841	19799		NR_002841		Rn4.5s	-	4.5S RNA	rRNA
common_peak1-12850-9-16--0.897849434846119-0.732381977911291	chr18	74778056	74778584	+	0	NA	intron (NM_201600, intron 5 of 38)	intron (NM_201600, intron 5 of 38)	-87542	NR_045368	73606	Mm.444734	NR_045368		1700120E14Rik	-	RIKEN cDNA 1700120E14 gene	ncRNA
common_peak2-30074-38-53--0.183434842864938-0.354801288549198	chr6	131387287	131388764	+	0	NA	Intergenic	Intergenic	-49557	NM_011733	56449	Mm.458000	NM_011733	ENSMUSG00000030189	Ybx3	Csda|Dpba|MSY3|MSY4|Yb2|dbpA|oxyR	Y box protein 3	protein-coding
common_peak2-28405-14-14--0.00767443525087419-0.308519316180257	chr4	141277302	141277963	+	0	NA	intron (NM_001017966, intron 1 of 9)	intron (NM_001017966, intron 1 of 9)	1702	NM_001017966	68817	Mm.393721	NM_001017966		Ddi2	1110056G13Rik|1700027M01Rik|9130022E05Rik|AI604911|AU040698	DNA-damage inducible protein 2	protein-coding
unique_peak2-39147-2-8--2.08737925770563-1.65811743852845	chr8	86888645	86889115	+	0	NA	Intergenic	B4|SINE|B4	-50383	NM_001252060	12286	Mm.334658	NM_007578	ENSMUSG00000034656	Cacna1a	APCA|BI|Caca1a|Cacnl1a4|Cav2.1|Ccha1a|EA2|FHM|HPCA|MHP|MHP1|SCA6|alpha1A|la|nmf352|rkr|tg	calcium channel, voltage-dependent, P/Q type, alpha 1A subunit	protein-coding
unique_peak2-33221-8-9--0.316705676939792-1.03275496310833	chr10	118987884	118988403	+	0	NA	intron (NM_133442, intron 1 of 21)	Lx8|LINE|L1	97053	NM_001277293	74053	Mm.196692	NM_028736	ENSMUSG00000034813	Grip1	4931400F03Rik|GRIP|eb	glutamate receptor interacting protein 1	protein-coding
unique_peak1-1467-9-0-3.18961340640422-3.01029995663981	chr12	110898048	110898519	+	0	NA	intron (NR_028261, intron 20 of 20)	intron (NR_028261, intron 20 of 20)	3728	NR_046306	100861572		NR_046306	ENSMUSG00000064417	DQ267102	-	snoRNA DQ267102	snoRNA
unique_peak1-6580-8-1-2.00522241794757-2.05605744720049	chr7	142046032	142046591	+	0	NA	intron (NM_001033420, intron 25 of 51)	MER31-int|LTR|ERV1	83802	NM_001143802	627214	Mm.323610	NM_001143802	ENSMUSG00000073805	Fam196a	B830028B13Rik	family with sequence similarity 196, member A	protein-coding
unique_peak2-35716-9-11--0.395349094316936-0.344532117358383	chr18	33923010	33923633	+	0	NA	Intergenic	Intergenic	-31225	NR_038152	69749	Mm.248787	NR_038151	ENSMUSG00000087590	2410004N09Rik	-	RIKEN cDNA 2410004N09 gene	ncRNA
common_peak1-18116-26-35--0.24202590928385-0.384630725886657	chr8	3676177	3677135	+	0	NA	intron (NM_025701, intron 1 of 1)	CpG	179	NM_025701	66682	Mm.29090	NM_025701		Trappc5	4021401A16Rik|TRS31	trafficking protein particle complex 5	protein-coding
common_peak1-18235-15-32--1.0322293688028-1.48160942223867	chr8	27042675	27043232	+	0	NA	intron (NM_008432, intron 25 of 26)	intron (NM_008432, intron 25 of 26)	44263	NM_029884	52120	Mm.28326	NM_029884	ENSMUSG00000037260	Hgsnat	9430010M12Rik|AW208455|D8Ertd354e|Tmem76	heparan-alpha-glucosaminide N-acetyltransferase	protein-coding
common_peak2-29867-8-6-0.197867495889966-1.03789460276074	chr6	108212484	108212908	+	0	NA	intron (NM_010585, intron 4 of 61)	intron (NM_010585, intron 4 of 61)	49606	NM_010585	16438	Mm.227912	NM_010585	ENSMUSG00000030102	Itpr1	D6Pas2|ENSMUSG00000072853|Gm10429|IP3R1|InsP3R|Ip3r|Itpr-1|P400|Pcp-1|Pcp1|opt	inositol 1,4,5-trisphosphate receptor 1	protein-coding
common_peak1-15150-64-55-0.658091479651-1.96968908950776	chr3	145683952	145686092	+	0	NA	TTS (NM_001166064)	TTS (NM_001166064)	34188	NM_001166064	214804	Mm.268854	NM_001166064	ENSMUSG00000036863	Syde2	C430017H16Rik	synapse defective 1, Rho GTPase, homolog 2 (C. elegans)	protein-coding
common_peak1-15157-11-6-0.701338662194009-1.32595962126035	chr3	146474293	146474814	+	0	NA	intron (NM_011100, intron 1 of 9)	intron (NM_011100, intron 1 of 9)	1357	NM_011100	18749	Mm.16766	NM_011100	ENSMUSG00000005034	Prkacb	Pkacb	protein kinase, cAMP dependent, catalytic, beta	protein-coding
common_peak2-26957-15-11-0.4272022498345-0.503257505534083	chr2	165287212	165287993	+	0	NA	intron (NM_054055, intron 1 of 12)	intron (NM_054055, intron 1 of 12)	11095	NM_054055	114644	Mm.250738	NM_054055	ENSMUSG00000018459	Slc13a3	NaDC-3|NaDC3|SDCT2	solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3	protein-coding
common_peak2-26703-61-46-0.828160478071703-2.638168732281	chr2	127722453	127724036	+	0	NA	intron (NM_028765, intron 8 of 17)	(T)n|Simple_repeat|Simple_repeat	42880	NM_028765	74121	Mm.244835	NM_028765	ENSMUSG00000027380	Acoxl	1200014P05Rik|AV025673	acyl-Coenzyme A oxidase-like	protein-coding
common_peak1-16371-24-15-0.793209902767717-1.16796998271032	chr5	122698090	122699172	+	0	NA	intron (NM_001039153, intron 8 of 13)	intron (NM_001039153, intron 8 of 13)	15838	NR_104441	654470	Mm.28804	NM_001039153	ENSMUSG00000038593	Tctn1	G730031O11Rik|Tect1	tectonic family member 1	protein-coding
common_peak1-8189-35-56--0.401519755702237-0.672788403510108	chr10	89685439	89686268	+	0	NA	intron (NM_001128086, intron 9 of 24)	intron (NM_001128086, intron 9 of 24)	349599	NM_001128086	77531	Mm.440605	NM_181398	ENSMUSG00000058589	Anks1b	AIDA-1b|C030032C09Rik|E530015N03Rik|ENSMUSG00000078431|Gm10937|Gm1555	ankyrin repeat and sterile alpha motif domain containing 1B	protein-coding
unique_peak2-39086-7-27--2.00826409175941-3.02827458119512	chr8	75093525	75094261	+	0	NA	exon (NM_172396, exon 3 of 5)	exon (NM_172396, exon 3 of 5)	1054	NM_172396	66818	Mm.22565	NM_172396	ENSMUSG00000044600	Smim7	9130011J15Rik	small integral membrane protein 7	protein-coding
unique_peak2-34614-3-8--1.58390809140159-1.39487600375387	chr14	75753844	75754270	+	0	NA	Intergenic	Intergenic	69877	NM_026083	67302	Mm.74704	NM_026083	ENSMUSG00000022000	Zc3h13	2600010B19Rik|3110050K21Rik|4930570G11Rik|C87618	zinc finger CCCH type containing 13	protein-coding
common_peak2-32044-5-4--0.0263084308932156-0.909929411522249	chr9	79759965	79760372	+	0	NA	intron (NM_001081243, intron 1 of 5)	intron (NM_001081243, intron 1 of 5)	65521	NM_001081243	70598	Mm.23049	NM_001081243	ENSMUSG00000034898	Filip1	5730485H21Rik|AI843021	filamin A interacting protein 1	protein-coding
common_peak1-13337-33-20-0.939020139746768-1.77675427888235	chr19	43918854	43920216	+	0	NA	Intergenic	B1_Mur2|SINE|Alu	6242	NR_033472	100038628	Mm.212585	NR_033472	ENSMUSG00000074828	Gm10768	ENSMUSG00000074828	predicted gene 10768	ncRNA
unique_peak1-4296-9-3-1.18961340640422-1.57096726280955	chr2	145842559	145843079	+	0	NA	Intergenic	Intergenic	82299	NM_175280	78774	Mm.136347	NM_175280	ENSMUSG00000037143	Cfap61	4930529M08Rik|BB178539|BC024760	cilia and flagella associated protein 61	protein-coding
common_peak1-11260-210-242-0.601320627461781-6.07522556811321	chr15	80254244	80256735	+	0	NA	Intergenic	Intergenic	135411	NM_001163189	383075	Mm.297626	NM_001163189	ENSMUSG00000050439	Enthd1	Gm1242|Gm86	ENTH domain containing 1	protein-coding
unique_peak1-5892-11-2-1.92373108353046-2.32232533660526	chr6	87026724	87027200	+	0	NA	intron (NM_013528, intron 13 of 18)	intron (NM_013528, intron 13 of 18)	-27778	NM_001167938	52372	Mm.282851	NM_001167937		D6Ertd527e	AU043841	DNA segment, Chr 6, ERATO Doi 527, expressed	protein-coding
common_peak2-21750-12-6-0.841421063030034-1.58711810488664	chr11	115955860	115956329	+	0	NA	Intergenic	Intergenic	-7816	NM_016852	22378	Mm.284792	NM_016852	ENSMUSG00000034341	Wbp2	-	WW domain binding protein 2	protein-coding
unique_peak2-32516-6-13--1.2419568116773-1.58711810488664	chr1	58504316	58504889	+	0	NA	exon (NM_022988, exon 1 of 6)	exon (NM_022988, exon 1 of 6)	125	NM_022988	65102	Mm.340248	NM_022988	ENSMUSG00000026036	Nif3l1	1110030G24Rik	Ngg1 interacting factor 3-like 1 (S. pombe)	protein-coding
common_peak1-8051-9-6-0.382258484346616-1.11707584880836	chr1	172242779	172243265	+	0	NA	TTS (NM_001039593)	TTS (NM_001039593)	4030	NM_001039593	76925	Mm.33631	NM_001039593	ENSMUSG00000042800	1700015E13Rik	-	RIKEN cDNA 1700015E13 gene	protein-coding
unique_peak2-34982-5-8--0.874305337448166-1.10484139239135	chr15	98998744	98999174	+	0	NA	intron (NM_139140, intron 3 of 12)	B3|SINE|B2	41683	NM_139140	72572	Mm.276650	NM_139140	ENSMUSG00000051934	Spats2	2700012F11Rik|59kDa|Scr59|p59	spermatogenesis associated, serine-rich 2	protein-coding
common_peak2-19962-8-4-0.683294323060208-1.21878474469819	chr1	133033367	133033762	+	0	NA	intron (NM_145508, intron 1 of 2)	intron (NM_145508, intron 1 of 2)	1247	NM_145508	226419	Mm.39299	NM_145508	ENSMUSG00000016526	Dyrk3	BC006704	dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3	protein-coding
unique_peak2-36793-6-6--0.241956811677302-0.947717972411649	chr3	81017071	81017525	+	0	NA	3' UTR (NM_019971, exon 6 of 6)	3' UTR (NM_019971, exon 6 of 6)	176960	NM_019971	54635	Mm.331089	NM_019971	ENSMUSG00000028019	Pdgfc	1110064L01Rik|AI647969|PDGF-C	platelet-derived growth factor, C polypeptide	protein-coding
unique_peak1-2687-9-0-3.18961340640422-3.01029995663981	chr16	76149728	76150193	+	0	NA	intron (NR_040575, intron 1 of 2)	intron (NR_040575, intron 1 of 2)	27102	NR_040575	78215	Mm.243885	NR_040575		4930578N18Rik	-	RIKEN cDNA 4930578N18 gene	ncRNA
unique_peak1-5769-10-3-1.35641534500877-1.75805390616669	chr6	53572305	53572842	+	0	NA	intron (NM_172728, intron 3 of 6)	intron (NM_172728, intron 3 of 6)	49205	NM_172728	231991	Mm.321138	NM_172728	ENSMUSG00000053007	Creb5	Crebpa|D430026C09Rik	cAMP responsive element binding protein 5	protein-coding
common_peak1-10343-59-95--0.259598499848578-0.580562178555099	chr13	75942920	75944390	+	0	NA	Intergenic	Intergenic	-33679	NM_053108	93692	Mm.25844	NM_053108	ENSMUSG00000021591	Glrx	C86710|D13Wsu156e|Glrx1|Grx1|TTase	glutaredoxin	protein-coding
common_peak1-15618-42-54--0.0390303856574761-0.30102999566397	chr4	133129672	133131067	+	0	NA	promoter-TSS (NM_172876)	promoter-TSS (NM_172876)	-291	NM_172876	242691	Mm.40110	NM_172876	ENSMUSG00000028850	Gpatch3	D930035B09Rik|Gpatc3	G patch domain containing 3	protein-coding
unique_peak1-6958-7-6--0.00826409175941478-0.97990265578305	chr8	111991877	111992336	+	0	NA	Intergenic	Intergenic	-25821	NM_019938	56523	Mm.42166	NM_019938	ENSMUSG00000031727	Pmfbp1	1700016D22Rik|F77|Stap	polyamine modulated factor 1 binding protein 1	protein-coding
unique_peak1-5634-11-2-1.92373108353046-2.32232533660526	chr6	17129052	17129762	+	0	NA	Intergenic	Intergenic	-18344	NR_102305	319682	Mm.136046	NR_102304	ENSMUSG00000085171	D830026I12Rik	-	RIKEN cDNA D830026I12 gene	ncRNA
common_peak2-28635-32-50--0.393333322751835-0.597008909195482	chr5	29377917	29379287	+	0	NA	Intergenic	MTB|LTR|MaLR	-143931	NM_021470	56874	Mm.87352	NM_021470	ENSMUSG00000029130	Rnf32	1700009J01Rik|2700025B22Rik|4930542N22Rik|Lmbr2	ring finger protein 32	protein-coding
common_peak2-27541-40-59--0.247914912857421-0.427481819178421	chr3	96160458	96162481	+	0	NA	Intergenic	Intergenic	57287	NR_001579	21748		NR_001579	ENSMUSG00000064796	Terc	mTER|mTR	telomerase RNA component	ncRNA
common_peak2-22660-13-9-0.456543935750406-0.53895475198017	chr13	95464740	95465220	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-93918	NM_009321	21371	Mm.379025	NM_009321	ENSMUSG00000042043	Tbca	Tbca13	tubulin cofactor A	protein-coding
common_peak1-18065-70-88-0.144233485409001-0.417832131711369	chr8	126614272	126616579	+	0	NA	Intergenic	ORR1A1-int|LTR|MaLR	68052	NM_001029876	382038	Mm.334891	NM_001029876	ENSMUSG00000031976	Urb2	C77575|mKIAA0133	URB2 ribosome biogenesis 2 homolog (S. cerevisiae)	protein-coding
common_peak2-22844-14-24--0.74464002941708-0.756118839439549	chr14	21500761	21501228	+	0	NA	intron (NM_001168273, intron 3 of 23)	B2_Mm2|SINE|B2	7451	NM_001168273	218811	Mm.173119	NM_172596	ENSMUSG00000039367	Sec24c	2610204K03Rik|mKIAA0079	Sec24 related gene family, member C (S. cerevisiae)	protein-coding
common_peak2-25397-601-653-1.00778546348108-49.6123486213039	chr19	5842856	5850392	+	0	NA	Intergenic	Intergenic	-1146	NR_003513	66961	Mm.281895	NR_003513		Neat1	2310043N10Rik|VINC	nuclear paraspeckle assembly transcript 1 (non-protein coding)	ncRNA
common_peak2-23152-4-10--1.48289213249054-1.5150158574804	chr14	120277199	120277651	+	0	NA	Intergenic	Tigger7|DNA|MER2_type	128976	NR_045621	75432	Mm.443277	NR_045621		1700006F04Rik	-	RIKEN cDNA 1700006F04 gene	ncRNA
common_peak1-19221-41-50-0.028723362877165-0.309546119484978	chr9	106788044	106789765	+	0	NA	TTS (NM_029103)	TTS (NM_029103)	427	NM_175402	109095	Mm.431589	NM_175402	ENSMUSG00000045365	Rbm15b	1810017N16Rik	RNA binding motif protein 15B	protein-coding
common_peak1-12442-43-89--0.709289910805972-2.06080902314195	chr17	79895369	79896088	+	0	NA	Intergenic	MTD|LTR|MaLR	14098	NR_033462	100038718	Mm.414347	NR_033462		Gm10494	ENSMUSG00000073373	predicted gene 10494	ncRNA
common_peak1-10178-20-15-0.488074784591193-0.590343908676236	chr13	40916025	40916897	+	0	NA	Intergenic	Intergenic	-38676	NM_023887	14538	Mm.314757	NM_008105	ENSMUSG00000021360	Gcnt2	5330430K10Rik|IGnT|IGnTA|IGnTB|IGnTC	glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	protein-coding
common_peak2-24779-24-29--0.113680692840802-0.304839791830752	chr17	59012766	59013449	+	0	NA	Intergenic	Intergenic	117691	NM_027001	69239	Mm.246732	NM_027001	ENSMUSG00000024227	2610034M16Rik	AV114557	RIKEN cDNA 2610034M16 gene	protein-coding
unique_peak1-2251-23-6-1.91441258245148-3.22740510021752	chr15	77343119	77344088	+	0	NA	intron (NM_001177533, intron 2 of 3)	L1_Mur2|LINE|L1	4902	NM_001177533	626615	Mm.390820	NM_001177533	ENSMUSG00000091650	Apol11a	EG626615	apolipoprotein L 11a	protein-coding
unique_peak1-4857-20-9-1.16614668970383-1.52222891542741	chr4	108887804	108888666	+	0	NA	Intergenic	MER20|DNA|MER1_type	-2783	NM_001285895	108802	Mm.318248	NM_001033226	ENSMUSG00000028558	Calr4	4933403L16Rik|AU017583	calreticulin 4	protein-coding
common_peak2-19888-24-33--0.294252938482622-0.390124689062463	chr1	97976563	97977638	+	0	NA	Intergenic	Intergenic	-58765	NR_040467	73454	Mm.396229	NR_040467		1700063A18Rik	-	RIKEN cDNA 1700063A18 gene	ncRNA
common_peak2-31712-34-63--0.617931472998734-1.219227950326	chr9	88718985	88720447	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-14286	NM_001177858	666731	Mm.446951	NM_001177858	ENSMUSG00000067399	Trim43c	EG666731|Trim43	tripartite motif-containing 43C	protein-coding
unique_peak1-3133-9-7-0.18961340640422-1.05908390183068	chr18	36382986	36383438	+	0	NA	Intergenic	Intergenic	-26398	NM_001167891	100042150	Mm.380390	NM_001167891	ENSMUSG00000060275	Nrg2	Don1|NTAK	neuregulin 2	protein-coding
unique_peak1-6855-7-2-1.21412832957703-1.45399745587252	chr8	85118536	85119032	+	0	NA	Intergenic	L1Md_F2|LINE|L1	179241	NM_145600	30932	Mm.269248	NM_145600	ENSMUSG00000031711	Zfp330	BC008086|Noa36|Znf330	zinc finger protein 330	protein-coding
common_peak1-11016-27-30-0.0373496405083609-0.315041925765932	chr15	38299349	38300491	+	0	NA	Intergenic	Intergenic	-69454	NM_001289471	21847	Mm.4292	NM_013692	ENSMUSG00000037465	Klf10	AI115143|EGR[a]|Egral|Gdnfif|TIEG-1|Tieg|Tieg1|mGIF	Kruppel-like factor 10	protein-coding
common_peak2-24783-15-8-0.842239749113344-0.891319708951327	chr17	63798022	63798468	+	0	NA	intron (NM_015794, intron 4 of 8)	intron (NM_015794, intron 4 of 8)	51684	NM_015794	50758	Mm.136366	NM_015794		Fbxl17	6330576B01Rik|AI452053|BB073797|C130023C01Rik|Fbx13|Fbxo13	F-box and leucine-rich repeat protein 17	protein-coding
common_peak1-8867-22-23-0.0623216043662485-0.319130838712456	chr11	35833876	35834637	+	0	NA	intron (NM_001290702, intron 26 of 27)	intron (NM_001290702, intron 26 of 27)	-40665	NM_170779	211652	Mm.31267	NM_170779		Wwc1	AA408228|AU017197|BC037006|Kibra|mKIAA0869	WW, C2 and coiled-coil domain containing 1	protein-coding
common_peak1-14137-37-41-0.133675648707058-0.363463023472118	chr2	131209856	131210739	+	0	NA	Intergenic	LTRIS_Mus|LTR|ERV1	-31669	NM_178607	51902	Mm.477523	NM_178607	ENSMUSG00000048911	Rnf24	2810473M14Rik|4930505A13Rik|AI317164|C86507|D2Ertd504e	ring finger protein 24	protein-coding
unique_peak1-4489-7-3-0.799090830298189-1.23214870625617	chr3	108511176	108511693	+	0	NA	intron (NM_029522, intron 2 of 14)	intron (NM_029522, intron 2 of 14)	13783	NM_029522	76123	Mm.226941	NM_029522	ENSMUSG00000027883	Gpsm2	6230410J09Rik|LGN|Pins	G-protein signalling modulator 2 (AGS3-like, C. elegans)	protein-coding
unique_peak1-4848-45-7-2.86035802534487-10.2231214387873	chr3	153589096	153590477	+	0	NA	intron (NM_007382, intron 10 of 11)	B1_Mur2|SINE|Alu	-13856	NR_028094	19352	Mm.277831	NM_011231	ENSMUSG00000038975	Rabggtb	-	Rab geranylgeranyl transferase, b subunit	protein-coding
common_peak1-14450-8-6-0.197867495889966-1.03789460276074	chr3	84278918	84279443	+	0	NA	intron (NM_001033301, intron 1 of 11)	intron (NM_001033301, intron 1 of 11)	4233	NM_001205355	229474	Mm.331107	NM_001033301		Fhdc1	6330505N24Rik|Gm126	FH2 domain containing 1	protein-coding
common_peak2-24732-4-7--1.02346051385325-1.09384600808989	chr17	47505288	47505720	+	0	NA	promoter-TSS (NM_183086)	promoter-TSS (NM_183086)	-332	NM_001146212	64657	Mm.216250	NM_183086	ENSMUSG00000034729	Mrps10	1110038B19Rik|AW743084|Rpms10	mitochondrial ribosomal protein S10	protein-coding
unique_peak1-6759-6-0-2.5653981103803-2.10720996964787	chr8	56312002	56312483	+	0	NA	Intergenic	Intergenic	272161	NM_001253756	234267	Mm.241700	NM_153581	ENSMUSG00000031517	Gpm6a	Gpm6|M6A	glycoprotein m6a	protein-coding
common_peak1-14728-10-5-0.771452844287613-1.33892459842472	chr3	84040335	84040790	+	0	NA	intron (NM_001271726, intron 1 of 11)	B3|SINE|B2	-15763	NM_030706	80890	Mm.44876	NM_030706	ENSMUSG00000027993	Trim2	mKIAA0517|narf	tripartite motif-containing 2	protein-coding
common_peak2-31688-8-11--0.579740082773585-1.14218153353838	chr8	128272537	128273105	+	0	NA	TTS (NM_025636)	TTS (NM_025636)	14718	NM_025636	66566	Mm.25296	NM_025636	ENSMUSG00000031851	Ntpcr	2310079N02Rik|AI449709	nucleoside-triphosphatase, cancer-related	protein-coding
unique_peak1-3417-11-2-1.92373108353046-2.32232533660526	chr19	5955594	5956185	+	0	NA	intron (NM_001164057, intron 5 of 17)	intron (NM_001164057, intron 5 of 17)	8317	NM_001164057	18969	Mm.209931	NM_008893	ENSMUSG00000024833	Pola2	AI573378	polymerase (DNA directed), alpha 2	protein-coding
common_peak2-28973-6-4-0.24347001549294-0.989110657569874	chr5	104403510	104403944	+	0	NA	intron (NM_198030, intron 1 of 6)	B1F|SINE|Alu	2680	NM_198030	243168	Mm.284944	NM_198030	ENSMUSG00000034528	Hsd17b13	AI047820|PAN1B-like|Pan1b	hydroxysteroid (17-beta) dehydrogenase 13	protein-coding
common_peak2-22341-16-20--0.274053780510699-0.353907621462756	chr13	23710001	23710857	+	0	NA	intron (NM_001177653, intron 1 of 1)	intron (NM_001177653, intron 1 of 1)	2534	NM_001177653	319179	Mm.440391	NM_178194	ENSMUSG00000047246	Hist1h2be	-	histone cluster 1, H2be	protein-coding
common_peak1-12518-13-14--0.12841856497075-0.301029995663977	chr18	36405103	36405778	+	0	NA	Intergenic	Intergenic	-35376	NM_008989	19290	Mm.231802	NM_008989		Pura	CAGER-1|Pur-alpha|ssCRE-BP	purine rich element binding protein A	protein-coding
unique_peak2-36389-4-9--1.34538860874061-1.36011389749466	chr2	120558676	120559309	+	0	NA	3' UTR (NM_080788, exon 16 of 16)	3' UTR (NM_080788, exon 16 of 16)	-1739	NM_026891	68968	Mm.2289	NM_026891	ENSMUSG00000027284	Cdan1	1500015A01Rik|AI448026|AW492297|CDA-I|CDA1|CDAI	congenital dyserythropoietic anemia, type I (human)	protein-coding
common_peak2-25495-37-41-0.133675648707058-0.363463023472118	chr19	5366318	5367658	+	0	NA	promoter-TSS (NM_011793)	promoter-TSS (NM_011793)	-112	NM_011793	23825	Mm.358649	NM_011793	ENSMUSG00000024844	Banf1	Baf|Bcrp1|L2bp1/Baf	barrier to autointegration factor 1	protein-coding
common_peak2-28724-7-5-0.214128329577033-1.01466476204226	chr5	36085337	36085735	+	0	NA	Intergenic	B1_Mur2|SINE|Alu	-13611	NM_194344	231147	Mm.290429	NM_194344	ENSMUSG00000036553	Sh3tc1	4631428G15|BC024909	SH3 domain and tetratricopeptide repeats 1	protein-coding
unique_peak1-4955-10-1-2.35641534500877-2.57096726280955	chr4	97855134	97855662	+	0	NA	Intergenic	Intergenic	194558	NM_053157	94043	Mm.331719	NM_053157	ENSMUSG00000028563	Tm2d1	2310026L18Rik|AA990549|Bbp	TM2 domain containing 1	protein-coding
common_peak1-11774-17-26--0.53659116395843-0.538442145997695	chr16	45038083	45038812	+	0	NA	Intergenic	MLT2B2|LTR|ERVL	-55719	NM_026439	67896	Mm.181074	NM_026439	ENSMUSG00000022665	Ccdc80	2610001E17Rik|DRO1|Ssg1|Urb	coiled-coil domain containing 80	protein-coding
common_peak1-9173-19-15-0.402687326661686-0.519193887192487	chr11	78188787	78189497	+	0	NA	intron (NM_008238, intron 1 of 8)	MIRb|SINE|MIR	10968	NM_008238	15218	Mm.4496	NM_008238	ENSMUSG00000002057	Foxn1	D11Bhm185e|Fkh19|HFH-11|Hfh11|Whn|nu|nude	forkhead box N1	protein-coding
unique_peak2-34811-6-6--0.241956811677302-0.947717972411649	chr15	74622521	74622942	+	0	NA	Intergenic	L1M5|LINE|L1	7667	NM_029627	76486	Mm.273319	NM_029627	ENSMUSG00000044678	Ly6k	2410015A16Rik|3110035B01Rik|mLy-6K	lymphocyte antigen 6 complex, locus K	protein-coding
common_peak1-16489-41-28-0.843167709721088-1.8888294360187	chr5	138193890	138195289	+	0	NA	intron (NM_029805, intron 3 of 5)	intron (NM_029805, intron 3 of 5)	7392	NM_023910	78829	Mm.286399	NM_023910	ENSMUSG00000029723	Tsc22d4	0610009M14Rik|1700023B23Rik|AI415410|Thg-1pit|Tilz2	TSC22 domain family, member 4	protein-coding
unique_peak2-33969-0-8--4.01005593191652-2.05605744720049	chr12	82247090	82247410	+	0	NA	intron (NM_022316, intron 5 of 12)	(TCTA)n|Simple_repeat|Simple_repeat	-19888	NR_037227	100526532		NR_037227		Mir3067	mmu-mir-3067	microRNA 3067	ncRNA
unique_peak2-33585-1-8--2.79698201165906-2.05605744720049	chr11	87024885	87025221	+	0	NA	intron (NM_197987, intron 22 of 23)	L1_Mus3|LINE|L1	84476	NM_197987	68729	Mm.17436	NM_197987	ENSMUSG00000018548	Trim37	1110032A10Rik|2810004E07Rik|AI848587|AU043018|MUL|TEF3|mKIAA0898	tripartite motif-containing 37	protein-coding
unique_peak1-6221-20-10-1.0286431659539-1.30248952876293	chr7	145047108	145048205	+	0	NA	Intergenic	Intergenic	418299	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
unique_peak1-409-23-2-3.13680500378792-5.60081203524255	chr1	157079555	157080439	+	0	NA	Intergenic	Intergenic	74164	NM_021433	58244	Mm.66264	NM_021433	ENSMUSG00000026470	Stx6	2310039E05Rik|2410005I16Rik|AA437559|AI415714|AI845861	syntaxin 6	protein-coding
unique_peak1-5518-9-1-2.18961340640422-2.31132995230379	chr5	137835743	137836356	+	0	NA	intron (NM_011741, intron 71 of 87)	(GA)n|Simple_repeat|Simple_repeat	44712	NM_010144	13846	Mm.34533	NM_010144	ENSMUSG00000029710	Ephb4	AI042935|Htk|MDK2|Myk1|Tyro11	Eph receptor B4	protein-coding
common_peak1-9747-18-23--0.272043349492805-0.34651636097721	chr12	51377508	51378196	+	0	NA	Intergenic	Intergenic	372358	NM_008858	18760	Mm.133719	NM_008858	ENSMUSG00000002688	Prkd1	PKD|PKD1|Pkcm|Prkcm	protein kinase D1	protein-coding
common_peak1-10116-15-6-1.20480982849805-1.32521814697968	chr13	30360671	30361460	+	0	NA	Intergenic	RMER19B|LTR|ERVK	-67160	NM_177322	11607	Mm.35062	NM_177322	ENSMUSG00000049115	Agtr1a	1810074K20Rik|AG2S|AI551199|AT1|AT1a|AT2R1|AT2R1A|Agtr-1a|Agtr1|Angtr-1a	angiotensin II receptor, type 1a	protein-coding
common_peak2-30434-10-17--0.813509656433543-0.699649909729472	chr7	44696680	44697330	+	0	NA	Intergenic	Intergenic	1822899	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak1-12781-15-7-1.01216475055566-1.08658567012551	chr18	62002237	62003005	+	0	NA	intron (NM_001164491, intron 7 of 23)	intron (NM_001164491, intron 7 of 23)	-56305	NM_178928	106877	Mm.26632	NM_178928	ENSMUSG00000033032	Afap1l1	AI173486	actin filament associated protein 1-like 1	protein-coding
common_peak2-26449-40-83--0.733341740027663-1.97656708196217	chr2	71625674	71627702	+	0	NA	intron (NM_001277970, intron 1 of 24)	intron (NM_001277970, intron 1 of 24)	1692	NM_001277970	16403	Mm.225096	NM_008397		Itga6	5033401O05Rik|AI115430|Cd49f|VLA-6	integrin alpha 6	protein-coding
common_peak1-17398-12-23--0.936186515633517-0.912223620338476	chr7	3703951	3704638	+	0	NA	intron (NM_001289428, intron 12 of 12)	L1Md_F2|LINE|L1	-32310	NM_011095	18733	Mm.326531	NM_011095		Pirb	Gp91|LIR-3|Lilrb3|PIR-B	paired Ig-like receptor B	protein-coding
common_peak1-11054-13-10-0.319040412000471-0.446472590016315	chr15	55112325	55113007	+	0	NA	Intergenic	Intergenic	-26639	NM_181277	12818	Mm.297859	NM_181277	ENSMUSG00000022371	Col14a1	5730412L22Rik|AW108078	collagen, type XIV, alpha 1	protein-coding
unique_peak1-5263-11-5-0.923731083530457-1.477227296591	chr5	64382966	64383682	+	0	NA	Intergenic	B1F1|SINE|Alu	-23188	NM_145923	100532	Mm.243632	NM_145923	ENSMUSG00000047881	Rell1	AA536743	RELT-like 1	protein-coding
unique_peak1-6462-11-4-1.18676548936425-1.68134727924692	chr7	102824345	102824778	+	0	NA	Intergenic	Intergenic	-534586	NM_011858	23966	Mm.254610	NM_011858	ENSMUSG00000048078	Tenm4	Doc4|ELM2|Odz4|R75022|Ten-m4|l(7)-3Rn|l7Rn3|mKIAA1302	teneurin transmembrane protein 4	protein-coding
common_peak2-27369-18-44--1.17893394510132-2.30394906186187	chr3	84814583	84815731	+	0	NA	Intergenic	Intergenic	-45655	NM_001040461	654362	Mm.466598	NM_001040461		Dear1	Dear|Despr	dual endothelin 1/angiotensin II receptor 1	protein-coding
unique_peak2-36875-6-6--0.241956811677302-0.947717972411649	chr3	94648295	94648703	+	0	NA	intron (NM_172683, intron 1 of 18)	L1MC5|LINE|L1	7010	NM_172683	229584	Mm.274787	NM_172683	ENSMUSG00000038902	Pogz	9530006B08Rik	pogo transposable element with ZNF domain	protein-coding
common_peak1-18885-13-7-0.778472030637769-0.817533494790411	chr9	32709597	32710244	+	0	NA	Intergenic	Intergenic	206293	NM_001038642	23871	Mm.292415	NM_011808	ENSMUSG00000032035	Ets1	AI196000|AI448617|D230050P06|Ets-1|Tpl1	E26 avian leukemia oncogene 1, 5' domain	protein-coding
common_peak2-23572-135-194-0.150155089290851-0.557492817869552	chr15	79545626	79547541	+	0	NA	exon (NM_013818, exon 8 of 12)	exon (NM_013818, exon 8 of 12)	25257	NM_013818	14904	Mm.19080	NM_013818	ENSMUSG00000042535	Gtpbp1	AL022987|AW045683|C85212|GP-1|Gtpbp	GTP binding protein 1	protein-coding
unique_peak1-6293-32-5-2.6941295184985-6.78080173520047	chr7	29461311	29462685	+	0	NA	Intergenic	Intergenic	-15870	NM_207238	233040	Mm.116116	NM_207238	ENSMUSG00000037463	Fbxo27	E130008B10Rik|FBG5|Gm161	F-box protein 27	protein-coding
unique_peak1-5808-7-0-2.79909083029819-2.40823996531185	chr6	67277707	67278155	+	0	NA	intron (NM_008354, intron 8 of 15)	Lx8|LINE|L1	48200	NM_008354	16162	Mm.188337	NM_008354	ENSMUSG00000018341	Il12rb2	A930027I18Rik|IL-12RB2|Ifnm	interleukin 12 receptor, beta 2	protein-coding
common_peak1-17808-11-17--0.661231417190699-0.58239619684445	chr7	100930516	100931010	+	0	NA	Intergenic	Intergenic	702374	NM_021427	58238	Mm.113787	NM_021427		Fam181b	A830059I20Rik|AB041569	family with sequence similarity 181, member B	protein-coding
unique_peak2-36344-2-11--2.50241675698448-2.32232533660526	chr2	92459375	92459986	+	0	NA	Intergenic	MTE2a|LTR|MaLR	19816	NM_023850	76969	Mm.38021	NM_023850	ENSMUSG00000027221	Chst1	2610008E20Rik|AW125896|C6ST|GST-1|Gst1|KSGAL6ST	carbohydrate (keratan sulfate Gal-6) sulfotransferase 1	protein-coding
common_peak1-16930-26-34--0.201383924786504-0.35535220421655	chr6	83054532	83055427	+	0	NA	intron (NM_001081266, intron 5 of 8)	intron (NM_001081266, intron 5 of 8)	3469	NM_001081266	243510	Mm.436553	NM_001081266	ENSMUSG00000079511	Ccdc142	A230058J24Rik	coiled-coil domain containing 142	protein-coding
unique_peak1-3748-15-5-1.4272022498345-1.61682445937017	chr19	47909410	47910193	+	0	NA	intron (NM_027559, intron 2 of 37)	B1_Mur4|SINE|Alu	2050	NM_027559	100048534	Mm.29457	NM_027559	ENSMUSG00000044948	Cfap43	4632415N18Rik|4930428C11Rik|4930463G05Rik|AI429486|D19Ertd652e|Wdr96	cilia and flagella associated protein 43	protein-coding
common_peak2-21977-13-6-0.971117108580164-1.01572999746118	chr12	49400163	49400587	+	0	NA	Intergenic	Intergenic	-1083495	NM_001160112	15228	Mm.4704	NM_008241	ENSMUSG00000020950	Foxg1	2900064B05Rik|BF-1|Bf1|Hfh9|Hfhbf1	forkhead box G1	protein-coding
common_peak2-28355-18-7-1.31291915122835-1.71830443967823	chr4	136140644	136140987	+	0	NA	intron (NM_133872, intron 2 of 18)	B1_Mus1|SINE|Alu	17823	NM_133872	99982	Mm.28540	NM_133872	ENSMUSG00000036940	Kdm1a	1810043O07Rik|AA408884|Aof2|D4Ertd478e|Kdm1|Lsd1|mKIAA0601	lysine (K)-specific demethylase 1A	protein-coding
unique_peak2-35867-4-7--1.02346051385325-1.09384600808989	chr18	78767974	78768416	+	0	NA	intron (NM_207651, intron 2 of 21)	MIR|SINE|MIR	25494	NM_207651	27411	Mm.44158	NM_030683	ENSMUSG00000024552	Slc14a2	UT-A1|UT-A3	solute carrier family 14 (urea transporter), member 2	protein-coding
common_peak2-27192-18-34--0.816363865716615-1.09826982379496	chr3	37419006	37419705	+	0	NA	intron (NM_001163511, intron 14 of 15)	intron (NM_001163511, intron 14 of 15)	100153	NM_021343	57815	Mm.172679	NM_021343	ENSMUSG00000027722	Spata5	2510048F20Rik|C78064|Spaf	spermatogenesis associated 5	protein-coding
unique_peak1-4290-12-3-1.64877598508764-2.36932189928148	chr2	143870871	143871490	+	0	NA	intron (NM_001044750, intron 1 of 2)	B3A|SINE|B2	12342	NM_207275	403171	Mm.389362	NM_207275	ENSMUSG00000037307	Banf2	4930517K23Rik|Baf-L|Baf-like|Gm115	barrier to autointegration factor 2	protein-coding
common_peak1-8921-19-6-1.59533240460408-2.21753093801298	chr11	51832939	51833782	+	0	NA	intron (NM_001166656, intron 5 of 12)	intron (NM_001166656, intron 5 of 12)	15637	NM_001166653	213084	Mm.280557	NM_153785	ENSMUSG00000020389	Cdkl3	AI852479|B230379H01Rik	cyclin-dependent kinase-like 3	protein-coding
unique_peak1-1539-11-0-3.50869358425161-3.61235994796777	chr13	20133588	20134088	+	0	NA	Intergenic	Intergenic	-48538	NM_080288	140580	Mm.342392	NM_080288	ENSMUSG00000041112	Elmo1	6330578D22Rik|C230095H21Rik|CED-12	engulfment and cell motility 1	protein-coding
unique_peak2-39499-3-8--1.58390809140159-1.39487600375387	chr9	61314667	61315105	+	0	NA	Intergenic	RMER5|LTR|ERV1	94713	NM_001083927	21887	Mm.24255	NM_009389	ENSMUSG00000032280	Tle3	2610103N05Rik|ESG|Grg3a|Grg3b|mKIAA1547	transducin-like enhancer of split 3, homolog of Drosophila E(spl)	protein-coding
unique_peak2-39317-3-6--1.22133801201688-1.08602067057793	chr8	124955331	124955771	+	0	NA	intron (NM_001301284, intron 1 of 4)	intron (NM_001301284, intron 1 of 4)	1289	NM_001301284	13057	Mm.271671	NM_007806	ENSMUSG00000006519	Cyba	b558|nmf333|p22-phox|p22phox	cytochrome b-245, alpha polypeptide	protein-coding
common_peak2-25953-5-5--0.289342836727009-0.909929411522249	chr19	47539163	47539549	+	0	NA	promoter-TSS (NM_008018)	promoter-TSS (NM_008018)	-455	NM_008018	14218	Mm.127560	NM_008018	ENSMUSG00000053617	Sh3pxd2a	2310014D11Rik|AA589508|AI256723|AI413738|C230050L11|EG329070|Fish|Gm5098|Sh3md1|TSK5|Tks5	SH3 and PX domains 2A	protein-coding
common_peak1-19350-22-9-1.32535601020004-2.00244947055753	chrX	8239082	8240117	+	0	NA	Intergenic	Intergenic	28371	NM_001081565	631002	Mm.379565	NM_001081565	ENSMUSG00000079703	Ssxb8	-	synovial sarcoma, X member B, breakpoint 8	protein-coding
unique_peak1-5048-8-2-1.42025991722641-1.65811743852845	chr4	134764117	134764621	+	0	NA	Intergenic	Intergenic	64306	NM_013885	29876	Mm.257765	NM_013885	ENSMUSG00000037242	Clic4	D0Jmb3|TU-74|mc3s5|mtCLIC	chloride intracellular channel 4 (mitochondrial)	protein-coding
common_peak1-18566-10-13--0.450939577048835-0.386243247519795	chr8	105346903	105347342	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-38111	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
common_peak1-13950-10-12--0.344024373132323-0.340565874754526	chr2	91157680	91158098	+	0	NA	intron (NM_175123, intron 3 of 8)	intron (NM_175123, intron 3 of 8)	52617	NM_023854	77038	Mm.43636	NM_023854	ENSMUSG00000027255	Arfgap2	2310032E02Rik|Zfp289	ADP-ribosylation factor GTPase activating protein 2	protein-coding
unique_peak2-38656-1-5--2.2120195109379-1.32905871926422	chr7	97332941	97333324	+	0	NA	intron (NM_146194, intron 13 of 20)	PB1D9|SINE|Alu	54390	NM_001252520	233489	Mm.235175	NM_146194	ENSMUSG00000039361	Picalm	CALM|CLTH|PAP180|fit-1|fit1|mKIAA4114	phosphatidylinositol binding clathrin assembly protein	protein-coding
unique_peak1-5967-7-0-2.79909083029819-2.40823996531185	chr6	94239228	94239583	+	0	NA	Intergenic	Intergenic	-5494	NM_001286785	14924	Mm.217216	NM_010367	ENSMUSG00000045095	Magi1	AIP3|BAP1|Baiap1|Gukmi1|MAGI1c|Magi-1|TNRC19|WWP3|mKIAA4129	membrane associated guanylate kinase, WW and PDZ domain containing 1	protein-coding
common_peak1-16333-39-50--0.0566640950523416-0.303223439438773	chr5	117318647	117319816	+	0	NA	Intergenic	B4A|SINE|B4	246771	NM_001122666	71954	Mm.34456	NM_178622	ENSMUSG00000066900	Suds3	2400003N08Rik|2410008L21Rik|AU067672|mSds3	suppressor of defective silencing 3 homolog (S. cerevisiae)	protein-coding
common_peak1-8945-10-11--0.228547155712387-0.31137425193576	chr11	54004586	54005077	+	0	NA	intron (NR_045506, intron 2 of 2)	ORR1A4|LTR|MaLR	21959	NR_045506	71056	Mm.56332	NR_045506	ENSMUSG00000086209	4933405E24Rik	-	RIKEN cDNA 4933405E24 gene	ncRNA
common_peak1-18055-10-8-0.186490343566457-1.078512453669	chr7	145024737	145025292	+	0	NA	Intergenic	Intergenic	395657	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
common_peak2-31875-6-8--0.60452689106201-1.03789460276074	chr9	55136017	55136414	+	0	NA	Intergenic	Intergenic	-4783	NM_032002	83961	Mm.443874	NM_032002	ENSMUSG00000032311	Nrg4	AI552600	neuregulin 4	protein-coding
common_peak1-18399-10-10--0.103016273628528-0.301029995663987	chr8	71701954	71702368	+	0	NA	Intergenic	Intergenic	-30784	NM_001013379	234358	Mm.334577	NM_001013379		Zfp930	-	zinc finger protein 930	protein-coding
unique_peak1-3785-15-10-0.552733131918359-0.604422558181019	chr19	55865739	55866541	+	0	NA	intron (NM_001142920, intron 4 of 11)	intron (NM_001142920, intron 4 of 11)	49840	NM_001142923	21416	Mm.139815	NM_009333	ENSMUSG00000024985	Tcf7l2	TCF4B|TCF4E|Tcf-4|Tcf4|mTcf-4B|mTcf-4E	transcription factor 7 like 2, T cell specific, HMG box	protein-coding
unique_peak1-7273-9-1-2.18961340640422-2.31132995230379	chr9	96889552	96890042	+	0	NA	intron (NM_145134, intron 2 of 2)	MIRb|SINE|MIR	28977	NM_145134	211949	Mm.491271	NM_145134	ENSMUSG00000046997	Spsb4	D030068E18Rik|SSB-4|Ssb4	splA/ryanodine receptor domain and SOCS box containing 4	protein-coding
common_peak1-9832-8-12--0.695217300193522-0.475924844171029	chr12	75818237	75818694	+	0	NA	Intergenic	Intergenic	420004	NM_198866	386753	Mm.341686	NM_198866	ENSMUSG00000029878	Dbpht2	Spot2	DNA binding protein with his-thr domain	protein-coding
unique_peak1-4307-12-1-2.64877598508764-3.36932189928148	chr2	148025883	148026286	+	0	NA	Intergenic	Intergenic	-153379	NM_010446	15376	Mm.938	NM_010446	ENSMUSG00000037025	Foxa2	HNF3-beta|HNF3beta|Hnf-3b|Hnf3b|Tcf-3b|Tcf3b	forkhead box A2	protein-coding
common_peak1-18924-9-16--0.897849434846119-0.732381977911291	chr9	44880697	44881136	+	0	NA	intron (NM_001093749, intron 5 of 5)	B3|SINE|B2	-6350	NM_001005421	270152	Mm.190461	NM_001005421	ENSMUSG00000048534	Amica1	AMICA|Crea7|Gm638	adhesion molecule, interacts with CXADR antigen 1	protein-coding
common_peak1-7840-9-5-0.604650905683064-1.21398586181642	chr1	131090339	131090796	+	0	NA	Intergenic	MTEa|LTR|MaLR	-79314	NM_172485	210417	Mm.380518	NM_172485	ENSMUSG00000042581	Thsd7b	1700074E13Rik|B930082A18|D130067I03Rik	thrombospondin, type I, domain containing 7B	protein-coding
common_peak1-12252-16-15-0.118263642268062-0.328191099940264	chr17	36000730	36001549	+	0	NA	exon (NM_134122, exon 3 of 4)	exon (NM_134122, exon 3 of 4)	-1401	NM_001146711	76448	Mm.359982	NM_175242	ENSMUSG00000034595	Ppp1r18	2310014H01Rik|AA407849|AI450394	protein phosphatase 1, regulatory subunit 18	protein-coding
unique_peak1-6497-7-4-0.477162735410827-1.09384600808989	chr7	113496396	113496878	+	0	NA	Intergenic	Intergenic	-28595	NR_030720	668128	Mm.484022	NR_030720		Gm8989	EG668128|Gm21911	very large inducible GTPase 1 pseudogene	pseudo
common_peak2-25842-61-65-0.338355210390887-0.777585324479293	chr19	41482054	41483898	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-23416	NM_031376	83490	Mm.222266	NM_031376	ENSMUSG00000025017	Pik3ap1	1810044J04Rik|BCAP	phosphoinositide-3-kinase adaptor protein 1	protein-coding
unique_peak2-33374-11-17--0.661231417190699-0.58239619684445	chr11	40754632	40755342	+	0	NA	Intergenic	Intergenic	-186199	NM_009831	12450	Mm.2103	NM_009831	ENSMUSG00000020326	Ccng1	AI314029	cyclin G1	protein-coding
common_peak2-24620-48-58-0.088284101872973-0.345907904941242	chr17	34024232	34025423	+	0	NA	intron (NM_001195298, intron 1 of 10)	intron (NM_001195298, intron 1 of 10)	2751	NM_001195298	100502766	Mm.335713	NM_001195298	ENSMUSG00000079553	Kifc1	100042970|Gm4137|HSET|KNSL2|Kifc5a|Knsl2a|Tctex-7|Tctex-7A|Tctex7|Tctex7a	kinesin family member C1	protein-coding
unique_peak1-7222-13-11-0.193509529916613-0.379391706698377	chr9	70847887	70848638	+	0	NA	Intergenic	Intergenic	-65647	NM_008280	15450	Mm.390187	NM_008280	ENSMUSG00000032207	Lipc	AI256194|HL|Hpl	lipase, hepatic	protein-coding
common_peak2-25065-67-91-0.0208495267259821-0.3057506808173	chr18	34776963	34777970	+	0	NA	intron (NM_001289606, intron 2 of 20)	B1F2|SINE|Alu	-6812	NM_001166407	19348	Mm.258846	NM_009004	ENSMUSG00000003779	Kif20a	AA415432|Rab6kifl	kinesin family member 20A	protein-coding
common_peak2-21435-45-50-0.187932683373377-0.429827778234671	chr11	86577388	86578530	+	0	NA	Intergenic	ORR1D2|LTR|MaLR	-6965	NM_001003908	67300	Mm.254588	NM_001003908	ENSMUSG00000047126	Cltc	3110065L21Rik|CHC|R74732	clathrin, heavy polypeptide (Hc)	protein-coding
unique_peak1-4515-13-4-1.45654393575041-2.23384849113406	chr3	27204795	27205442	+	0	NA	Intergenic	B4A|SINE|B4	-10881	NM_009425	22035	Mm.1062	NM_009425	ENSMUSG00000039304	Tnfsf10	A330042I21Rik|AI448571|APO-2L|Ly81|TL2|Trail	tumor necrosis factor (ligand) superfamily, member 10	protein-coding
common_peak1-14462-26-61--1.02629721822841-2.64075047711343	chr3	75956123	75957229	+	0	NA	intron (NM_001253719, intron 2 of 15)	L1Md_F2|LINE|L1	77171	NM_001253719	213262	Mm.379337	NM_178673	ENSMUSG00000034098	Fstl5	9130207J01Rik	follistatin-like 5	protein-coding
unique_peak2-39391-2-8--2.08737925770563-1.65811743852845	chr9	22664939	22665265	+	0	NA	intron (NM_181316, intron 20 of 21)	Lx8|LINE|L1	-362418	NM_028472	73230	Mm.335020	NM_028472	ENSMUSG00000031963	Bmper	3110056H04Rik|CV-2|Crim3|Cv2	BMP-binding endothelial regulator	protein-coding
unique_peak2-33324-2-7--1.91745425626332-1.45399745587252	chr11	12407248	12407668	+	0	NA	Intergenic	IAPLTR1_Mm|LTR|ERVK	-42495	NM_001282993	12808	Mm.22847	NM_172496	ENSMUSG00000020173	Cobl	-	cordon-bleu WH2 repeat	protein-coding
common_peak2-29225-16-30--0.835932668118813-1.0921097739129	chr5	138085056	138085824	+	0	NA	exon (NM_010571, exon 2 of 2)	exon (NM_010571, exon 2 of 2)	1502	NM_010571	16369	Mm.24486	NM_010571	ENSMUSG00000047182	Irs3	AA408304	insulin receptor substrate 3	protein-coding
common_peak2-25745-191-198-0.724364644737832-7.44680159089459	chr19	28010506	28012497	+	0	NA	intron (NM_001166414, intron 1 of 17)	intron (NM_001166414, intron 1 of 17)	45937	NM_001166414	19726	Mm.313321	NM_011265	ENSMUSG00000040929	Rfx3	C230093O12Rik|MRFX3	regulatory factor X, 3 (influences HLA class II expression)	protein-coding
common_peak2-24573-20-45--1.03548717146582-2.05089002217436	chr17	29549631	29550555	+	0	NA	Intergenic	Intergenic	52234	NM_001159538	26382	Mm.279187	NM_013710	ENSMUSG00000024013	Fgd2	Tcd-2|Tcd2|ZFYVE4|tcs-2|tcs2	FYVE, RhoGEF and PH domain containing 2	protein-coding
common_peak2-19594-13-16--0.30899081061257-0.330004445983672	chr1	23202314	23202933	+	0	NA	Intergenic	MLT1B|LTR|MaLR	-76485	NR_029533	387225		NR_029533	miRBase:MI0000144	Mir30a	Mirn30a|mmu-mir-30a	microRNA 30a	ncRNA
common_peak1-9243-413-416-1.00180780032199-31.3716927143687	chr11	86581670	86588525	+	0	NA	intron (NM_026191, intron 16 of 17)	RSINE1|SINE|B4	-14103	NM_001003908	67300	Mm.254588	NM_001003908	ENSMUSG00000047126	Cltc	3110065L21Rik|CHC|R74732	clathrin, heavy polypeptide (Hc)	protein-coding
common_peak1-17012-54-37-0.925158248186149-2.78521478104011	chr6	90795754	90797206	+	0	NA	Intergenic	Intergenic	-36363	NM_001134384	232227	Mm.196943	NM_182784	ENSMUSG00000034312	Iqsec1	AW561907|BC026481|BRAG2|D6Ertd349e|cI-43	IQ motif and Sec7 domain 1	protein-coding
common_peak1-8922-33-19-1.00940946763817-1.9602491241746	chr11	51876378	51877728	+	0	NA	intron (NM_001166654, intron 13 of 13)	intron (NM_001166654, intron 13 of 13)	-35273	NM_019411	19052	Mm.260288	NM_019411		Ppp2ca	PP2A|R75353	protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform	protein-coding
common_peak2-30708-14-16--0.188246680892695-0.308035960714963	chr7	112535111	112535710	+	0	NA	intron (NM_001242363, intron 7 of 12)	intron (NM_001242363, intron 7 of 12)	11798	NM_001195727	100503879	Mm.380109	NM_001195727	ENSMUSG00000078611	Gm5901	EG545989	predicted gene 5901	protein-coding
common_peak2-28544-38-61--0.382743651088345-0.638510577194958	chr5	3543771	3544514	+	0	NA	intron (NM_001042501, intron 1 of 10)	CpG	309	NM_001042501	68152	Mm.240265	NM_026583		Fam133b	2900022K02Rik|5830415L20Rik	family with sequence similarity 133, member B	protein-coding
unique_peak2-33930-11-17--0.661231417190699-0.58239619684445	chr12	70937361	70938287	+	0	NA	intron (NR_033573, intron 6 of 7)	intron (NR_033573, intron 6 of 7)	-6849	NR_038173	70934	Mm.440427	NR_038172		4931403G20Rik	-	RIKEN cDNA 4931403G20 gene	ncRNA
common_peak1-7490-12-14--0.25811461052088-0.309074325783021	chr1	9798034	9798641	+	0	NA	intron (NM_177547, intron 1 of 16)	B3A|SINE|B2	10126	NM_177547	170755	Mm.336410	NM_133220	ENSMUSG00000025915	Sgk3	2510015P22Rik|A330005P07Rik|Cisk|fy|fz	serum/glucocorticoid regulated kinase 3	protein-coding
unique_peak2-33361-5-5--0.289342836727009-0.909929411522249	chr11	32225327	32225686	+	0	NA	Intergenic	Intergenic	-22305	NM_177364	268396	Mm.227616	NM_177364	ENSMUSG00000040711	Sh3pxd2b	G431001E03Rik|TSK4|fad49	SH3 and PX domains 2B	protein-coding
unique_peak1-1433-9-0-3.18961340640422-3.01029995663981	chr12	87404538	87405049	+	0	NA	exon (NM_009368, exon 4 of 7)	exon (NM_009368, exon 4 of 7)	15198	NM_009368	21809	Mm.3992	NM_009368	ENSMUSG00000021253	Tgfb3	Tgfb-3	transforming growth factor, beta 3	protein-coding
common_peak1-16964-16-21--0.341167976369236-0.392630012299441	chr6	86194841	86195508	+	0	NA	intron (NM_031199, intron 2 of 5)	intron (NM_031199, intron 2 of 5)	49929	NM_031199	21802	Mm.137222	NM_031199	ENSMUSG00000029999	Tgfa	wa-1|wa1	transforming growth factor alpha	protein-coding
unique_peak1-6267-8-3-1.00522241794757-1.39487600375387	chr7	24610415	24610874	+	0	NA	Intergenic	L1Md_F|LINE|L1	10101	NM_001166721	546943	Mm.480275	NM_001166721	ENSMUSG00000096859	Vmn1r176	Gm5998	vomeronasal 1 receptor 176	protein-coding
common_peak2-31904-9-12--0.510826311736872-0.394412252720706	chr9	57910381	57910828	+	0	NA	intron (NM_001166282, intron 10 of 19)	intron (NM_001166282, intron 10 of 19)	30523	NM_001243265	330951	Mm.406992	NM_001243265		Gm16130	E330033L03|OTTMUSG00000030814	predicted gene 16130	protein-coding
common_peak1-13990-20-8-1.31814978314888-1.77631109801764	chr2	103286632	103287680	+	0	NA	intron (NM_010125, intron 4 of 6)	CT-rich|Low_complexity|Low_complexity	22931	NM_010125	13711	Mm.20888	NM_010125	ENSMUSG00000027186	Elf5	ESE-2|ESE-5|ESE-5.	E74-like factor 5	protein-coding
common_peak2-25326-34-14-1.47517793139275-3.48244293670685	chr18	75901038	75901552	+	0	NA	Intergenic	B3|SINE|B2	-43945	NM_201354	269037	Mm.36745	NM_201354	ENSMUSG00000052928	Ctif	Gm672	CBP80/20-dependent translation initiation factor	protein-coding
common_peak2-21998-8-23--1.57974008277359-1.94520747672513	chr12	54998938	54999718	+	0	NA	intron (NM_013780, intron 5 of 11)	L1Md_T|LINE|L1	305533	NM_028133	112407	Mm.133037	NM_028133	ENSMUSG00000035105	Egln3	2610021G09Rik|AI505553|AI648162|Hif-p4h-3|Phd3|SM-20	egl-9 family hypoxia-inducible factor 3	protein-coding
common_peak2-23187-86-116-0.105271074448948-0.39078581421855	chr15	77036571	77038395	+	0	NA	intron (NM_001110827, intron 2 of 13)	intron (NM_001110827, intron 2 of 13)	-53241	NM_001286418	93686	Mm.202774	NM_053104	ENSMUSG00000033565	Rbfox2	Fbm2|Fxh|Hrnbp2|Rbm9	RNA binding protein, fox-1 homolog (C. elegans) 2	protein-coding
unique_peak2-37946-10-23--1.22854715571239-1.44380006500971	chr5	149526455	149527416	+	0	NA	Intergenic	Intergenic	-26481	NR_028285	70138	Mm.417834	NR_028285	ENSMUSG00000086494	2210417A02Rik	AV081004	RIKEN cDNA 2210417A02 gene	ncRNA
common_peak2-28881-18-18-0.0649916377847664-0.323898164595606	chr5	81674291	81674862	+	0	NA	intron (NM_198702, intron 3 of 27)	B1_Mus2|SINE|Alu	223958	NM_198702	319387	Mm.273631	NM_198702	ENSMUSG00000037605	Lphn3	5430402I23Rik|CIRL-3|D130075K09Rik|Gm1379|LEC3|mKIAA0768	latrophilin 3	protein-coding
common_peak2-31024-39-56--0.217128767245588-0.402440571782907	chr8	11757480	11759089	+	0	NA	promoter-TSS (NM_001113518)	promoter-TSS (NM_001113518)	-46	NM_017402	54126	Mm.244068	NM_017402	ENSMUSG00000031511	Arhgef7	Cool|PIX|Pak3bp|betaPix|betaPix-b|betaPix-c|cool-1|mKIAA0142|p85Cool1|p85SPR	Rho guanine nucleotide exchange factor (GEF7)	protein-coding
unique_peak2-38236-2-4--1.23938235115068-0.931118710592187	chr6	118378860	118379123	+	0	NA	exon (NM_028335, exon 6 of 6)	exon (NM_028335, exon 6 of 6)	-9556	NM_194339	213895	Mm.25269	NM_194339	ENSMUSG00000030138	Bms1	AA408648|AU020092|AU043373|BB007109|BC030906|Bms1l|mKIAA0187	BMS1 homolog, ribosome assembly protein (yeast)	protein-coding
unique_peak2-34049-0-7--3.84013093047421-1.80617997398389	chr12	113020671	113020978	+	0	NA	intron (NM_001025360, intron 9 of 15)	intron (NM_001025360, intron 9 of 15)	23745	NM_001025361	16593	Mm.278357	NM_008450	ENSMUSG00000021288	Klc1	AI874768|Kns2	kinesin light chain 1	protein-coding
common_peak2-28150-60-74-0.125473171124651-0.39015513150604	chr4	103213899	103215487	+	0	NA	Intergenic	PB1D10|SINE|Alu	159588	NR_040673	622167	Mm.244115	NR_040673	ENSMUSG00000086136	Gm12718	OTTMUSG00000008109	predicted gene 12718	ncRNA
unique_peak2-36244-0-10--4.29956254911151-2.57096726280955	chr2	39860442	39860803	+	0	NA	Intergenic	Lx5|LINE|L1	-778764	NM_024209	67857	Mm.389242	NM_024209		Ppp6c	2310003C10Rik	protein phosphatase 6, catalytic subunit	protein-coding
common_peak2-23005-6-7--0.434601889619698-0.97990265578305	chr14	61556360	61556761	+	0	NA	Intergenic	Intergenic	100264	NM_001164155	29820	Mm.281356	NM_013869	ENSMUSG00000060548	Tnfrsf19	AL023044|AW123854|TAJ|TAJ-ALPHA|TRADE|Troy	tumor necrosis factor receptor superfamily, member 19	protein-coding
common_peak1-8809-40-26-0.90408818058763-2.09593985174544	chr11	20895814	20897602	+	0	NA	Intergenic	RLTR23|LTR|ERV1	-94619	NM_023324	67245	Mm.28957	NM_023324	ENSMUSG00000020134	Peli1	2810468L03Rik|A930031K15Rik|AA409794|AI586297|D11Ertd676e	pellino 1	protein-coding
unique_peak2-35645-7-12--0.901348887842903-1.31827279259406	chr18	24116891	24117597	+	0	NA	intron (NM_027007, intron 3 of 3)	intron (NM_027007, intron 3 of 3)	4055	NM_027007	69256	Mm.218343	NM_027007	ENSMUSG00000024276	Zfp397	2810411K16Rik|6720480F11Rik|AI461664	zinc finger protein 397	protein-coding
unique_peak2-38557-5-5--0.289342836727009-0.909929411522249	chr7	64249113	64249564	+	0	NA	intron (NM_008074, intron 3 of 9)	intron (NM_008074, intron 3 of 9)	392903	NM_008074	14407	Mm.434343	NM_008074		Gabrg3	B230362M20Rik|Gabrg-3	gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3	protein-coding
common_peak1-15051-12-11-0.0638134843664826-0.337263207250336	chr3	122520826	122521413	+	0	NA	intron (NM_153422, intron 12 of 20)	intron (NM_153422, intron 12 of 20)	-16221	NR_045168	71647	Mm.449992	NR_045168		4930447N08Rik	-	RIKEN cDNA 4930447N08 gene	ncRNA
common_peak1-15607-10-10--0.103016273628528-0.301029995663987	chr4	132345260	132345861	+	0	NA	exon (NM_001033308, exon 3 of 6)	exon (NM_001033308, exon 3 of 6)	6719	NM_001033308	230787	Mm.290912	NM_001033308	ENSMUSG00000037731	Themis2	ICB-1	thymocyte selection associated family member 2	protein-coding
common_peak2-32178-46-77--0.387406275613447-0.760282562501383	chr9	113740701	113742035	+	0	NA	intron (NM_001286600, intron 2 of 34)	RMER4B|LTR|ERVK	19664	NM_001081960	76499	Mm.222272	NM_029633	ENSMUSG00000033392	Clasp2	1500004F14Rik|8030404L10Rik|C77448|CLASP2beta|mKIAA0627	CLIP associating protein 2	protein-coding
common_peak1-8027-36-44--0.0125320101619204-0.303469903643781	chr1	170174315	170175773	+	0	NA	intron (NM_001291508, intron 2 of 7)	intron (NM_001291508, intron 2 of 7)	187256	NM_001291508	18514	Mm.43358	NM_008783	ENSMUSG00000052534	Pbx1	2310056B04Rik|D230003C07Rik|Pbx-1	pre B cell leukemia homeobox 1	protein-coding
common_peak1-18769-42-39-0.420401232979821-0.828688081372012	chr8	126838433	126839724	+	0	NA	intron (NM_139272, intron 3 of 15)	intron (NM_139272, intron 3 of 15)	83784	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
unique_peak1-3109-12-3-1.64877598508764-2.36932189928148	chr18	32035706	32036396	+	0	NA	intron (NM_028866, intron 7 of 21)	intron (NM_028866, intron 7 of 21)	35506	NM_026006	67158	Mm.31537	NM_026006	ENSMUSG00000044982	Sft2d3	2610206C24Rik|AI847965|AW046173	SFT2 domain containing 3	protein-coding
common_peak1-9795-34-39-0.0601404321139034-0.325162986021101	chr12	65073278	65074243	+	0	NA	Intergenic	Intergenic	502125	NM_001163271	623046	Mm.189552	NM_001163271	ENSMUSG00000043060	Fscb	EG623046	fibrous sheath CABYR binding protein	protein-coding
unique_peak2-34552-8-8--0.164702583494742-1.00793137938329	chr14	62837965	62838523	+	0	NA	Intergenic	B2_Mm2|SINE|B2	73572	NM_173419	239133	Mm.127330	NM_173419	ENSMUSG00000048281	Dleu7	BC038059	deleted in lymphocytic leukemia, 7	protein-coding
unique_peak1-3025-7-0-2.79909083029819-2.40823996531185	chr18	13565810	13566295	+	0	NA	Intergenic	Intergenic	400553	NM_153087	225192	Mm.207073	NM_153087	ENSMUSG00000037346	Hrh4	AXOR35|BG26|GPCR105|GPRv53|H4|H4R|HH4R	histamine receptor H4	protein-coding
unique_peak2-35739-8-24--1.63863377182715-2.11898024768848	chr18	36514927	36515972	+	0	NA	intron (NM_001081365, intron 1 of 2)	intron (NM_001081365, intron 1 of 2)	7171	NM_001081365	66060	Mm.272527	NM_001081365		Cystm1	0610010O12Rik	cysteine-rich transmembrane module containing 1	protein-coding
common_peak1-11745-19-28--0.455293668465885-0.518921928796332	chr16	35768848	35769540	+	0	NA	exon (NM_153550, exon 1 of 9)	exon (NM_153550, exon 1 of 9)	248	NM_153550	224132	Mm.24094	NM_153550	ENSMUSG00000022848	Dirc2	RCC4	disrupted in renal carcinoma 2 (human)	protein-coding
common_peak1-12510-23-16-0.634304663258741-0.82304638657543	chr18	68156707	68157759	+	0	NA	intron (NM_172631, intron 1 of 5)	Lx2B|LINE|L1	64322	NM_172631	52662	Mm.440183	NM_172631	ENSMUSG00000024544	Ldlrad4	8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik	low density lipoprotein receptor class A domain containing 4	protein-coding
common_peak1-16591-7-8--0.370834171144123-1.00793137938329	chr5	148928756	148929228	+	0	NA	intron (NM_029920, intron 4 of 14)	Lx5|LINE|L1	160096	NM_029920	77521	Mm.244177	NM_029920	ENSMUSG00000029651	Mtus2	5730592G18Rik|A730013O20Rik|AU067634|C130038G02Rik|Cazip|Gm763|mKIAA0774	microtubule associated tumor suppressor candidate 2	protein-coding
unique_peak1-5018-15-4-1.69023665566829-1.97518968347063	chr4	127125789	127126613	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-90793	NM_010291	14622	Mm.26859	NM_010291	ENSMUSG00000042357	Gjb5	Cnx31.1|Cx31.1|Gjb-5	gap junction protein, beta 5	protein-coding
unique_peak2-33106-1-12--3.32749672835784-3.1004765869889	chr10	80929259	80929733	+	0	NA	intron (NM_176954, intron 8 of 11)	intron (NM_176954, intron 8 of 11)	15958	NM_176954	319586	Mm.152689	NM_176954	ENSMUSG00000034818	Celf5	4930565A21Rik|Brunol5	CUGBP, Elav-like family member 5	protein-coding
common_peak1-12207-18-17-0.142994149786039-0.353907621462753	chr17	33782549	33783526	+	0	NA	TTS (NM_001109913)	TTS (NM_001109913)	7997	NR_028279	378460	Mm.272606	NM_001002842	ENSMUSG00000032739	Pram1	AY665714	PML-RAR alpha-regulated adaptor molecule 1	protein-coding
common_peak1-17593-16-14-0.211373046659543-0.364171515310935	chr7	44304281	44304904	+	0	NA	Intergenic	Intergenic	2215312	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak1-16853-50-49-0.397084126704228-0.848735523516959	chr6	54201499	54203412	+	0	NA	intron (NM_001163640, intron 6 of 12)	intron (NM_001163640, intron 6 of 12)	-20361	NM_023543	69993	Mm.321147	NM_023543	ENSMUSG00000004633	Chn2	1700026N20Rik|4930557O16Rik|ARHGAP3|Bch	chimerin 2	protein-coding
unique_peak2-38434-8-7-0.00522241794757061-1.00793137938329	chr7	27178427	27178909	+	0	NA	intron (NM_001042612, intron 1 of 8)	Lx6|LINE|L1	594	NM_001042612	330490	Mm.212174	NM_194062	ENSMUSG00000040614	Nlrp9c	AA636537|BB062542|Nalp-zeta|Nalp9c	NLR family, pyrin domain containing 9C	protein-coding
common_peak1-9183-9-6-0.382258484346616-1.11707584880836	chr11	78536380	78536858	+	0	NA	Intergenic	Intergenic	-25692	NM_008702	18099	Mm.9001	NM_008702	ENSMUSG00000017376	Nlk	AI194375	nemo like kinase	protein-coding
common_peak1-17313-18-20--0.0793982715504091-0.301029995663976	chr6	142345370	142346248	+	0	NA	intron (NM_025872, intron 4 of 4)	intron (NM_025872, intron 4 of 4)	10046	NM_025872	66964	Mm.3676	NM_025872	ENSMUSG00000030245	Golt1b	2310061A22Rik|AA407874|AU024291|CGI-141	golgi transport 1 homolog B (S. cerevisiae)	protein-coding
common_peak2-32355-6-9--0.75652998450706-1.11707584880836	chrX	94235050	94235571	+	0	NA	Intergenic	L1Md_F3|LINE|L1	-32625	NM_001033361	245526	Mm.336164	NM_001033361	ENSMUSG00000031212	Pgr15l	-	G protein-coupled receptor 15-like	protein-coding
common_peak2-31812-14-28--0.958764834769927-1.16796998271031	chr9	40798627	40799500	+	0	NA	intron (NM_019465, intron 3 of 9)	intron (NM_019465, intron 3 of 9)	13648	NM_001281954	54698	Mm.42791	NM_019465	ENSMUSG00000032021	Crtam	-	cytotoxic and regulatory T cell molecule	protein-coding
unique_peak2-38652-1-11--3.2120195109379-2.83420869758413	chr7	95689505	95690089	+	0	NA	Intergenic	Intergenic	111014	NM_028238	72433	Mm.276669	NM_028238	ENSMUSG00000030559	Rab38	2310011F14Rik|AU043391|cht	RAB38, member RAS oncogene family	protein-coding
common_peak1-15768-16-18--0.129663871175524-0.307235046933848	chr4	151996227	151996862	+	0	NA	Intergenic	Intergenic	-75105	NR_033138	330004	Mm.291863	NM_001033414		Gm833	-	predicted gene 833	ncRNA
common_peak1-17945-68-67-0.482497938047957-1.35721122071865	chr7	127511564	127512936	+	0	NA	intron (NM_177213, intron 16 of 30)	Lx8|LINE|L1	40052	NM_177213	320631	Mm.78330	NM_177213	ENSMUSG00000054746	Abca15	4930500I12Rik	ATP-binding cassette, sub-family A (ABC1), member 15	protein-coding
unique_peak1-1044-14-7-0.899216160357645-0.947446088118041	chr11	77771784	77772425	+	0	NA	intron (NM_001291225, intron 3 of 15)	intron (NM_001291225, intron 3 of 15)	-24214	NM_174852	268448	Mm.274329	NM_174852	ENSMUSG00000037791	Phf12	2410142K10Rik|F630045O13|PF1|mKIAA1523	PHD finger protein 12	protein-coding
common_peak2-27775-63-123--0.515883719316285-1.64778087584273	chr3	133091083	133092504	+	0	NA	Intergenic	RMER6B|LTR|ERVK	115561	NM_001040400	214133	Mm.347816	NM_145989	ENSMUSG00000040943	Tet2	Ayu17-449|E130014J05Rik|mKIAA1546	tet methylcytosine dioxygenase 2	protein-coding
common_peak2-21787-15-17--0.157760250886656-0.307611222530528	chr11	117932559	117933263	+	0	NA	intron (NM_001167746, intron 48 of 80)	RSINE1|SINE|B4	57622	NM_001167746	69926	Mm.473893	NM_001167746	ENSMUSG00000033987	Dnah17	2810003K23Rik|Dnahc17|Dnahcl1|Gm1178|mKIAA3028	dynein, axonemal, heavy chain 17	protein-coding
common_peak2-23341-15-25--0.688274967585436-0.73354163167379	chr15	38661886	38662681	+	0	NA	Intergenic	Intergenic	70624	NM_025494	66335	Mm.276618	NM_025494	ENSMUSG00000022295	Atp6v1c1	1700025B18Rik|U13839	ATPase, H+ transporting, lysosomal V1 subunit C1	protein-coding
unique_peak2-34214-2-7--1.91745425626332-1.45399745587252	chr13	44839263	44839677	+	0	NA	intron (NM_021878, intron 2 of 18)	intron (NM_021878, intron 2 of 18)	12830	NM_001205043	16468	Mm.25059	NM_021878	ENSMUSG00000038518	Jarid2	Jmj|jumonji	jumonji, AT rich interactive domain 2	protein-coding
common_peak2-28769-44-58--0.0607502147933063-0.302918256338863	chr5	51551843	51553301	+	0	NA	Intergenic	Intergenic	392588	NR_027710	19017	Mm.259072	NM_008904	ENSMUSG00000029167	Ppargc1a	A830037N07Rik|ENSMUSG00000079510|Gm11133|PGC-1|PGC-1v|Pgc-1alpha|Pgc1|Pgco1|Ppargc1	peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	protein-coding
common_peak1-8572-31-22-0.70167671475611-1.13829382151971	chr10	96871324	96872450	+	0	NA	Intergenic	Intergenic	-14225	NR_039547	100628616		NR_039547		Mir3966	mmu-mir-3966|mu-mir-3966	microRNA 3966	ncRNA
common_peak2-30069-12-12--0.0516637330534535-0.309718203022949	chr6	129232260	129232807	+	0	NA	Intergenic	MTEa|LTR|MaLR	-7146	NM_001033122	12515	Mm.74745	NM_001033122	ENSMUSG00000030156	Cd69	5830438K24Rik|AI452015|AIM|VEA	CD69 antigen	protein-coding
common_peak2-25206-33-17-1.16141256108322-2.37490429172804	chr18	60722752	60723462	+	0	NA	intron (NM_025776, intron 2 of 10)	MTE2a|LTR|MaLR	2667	NM_025776	66810	Mm.275106	NM_025776	ENSMUSG00000024604	Rbm22	8430430L24Rik	RNA binding motif protein 22	protein-coding
unique_peak1-6133-8-1-2.00522241794757-2.05605744720049	chr6	134443449	134443953	+	0	NA	intron (NM_008514, intron 7 of 22)	PB1D7|SINE|Alu	73230	NM_008514	16974	Mm.321990	NM_008514	ENSMUSG00000030201	Lrp6	C030016K15Rik|Cd|Gw|ska26|ska<m26Jus>|skax26	low density lipoprotein receptor-related protein 6	protein-coding
common_peak1-8014-50-50-0.368514974507457-0.781782704927518	chr1	167349101	167350777	+	0	NA	intron (NM_028759, intron 5 of 18)	B4A|SINE|B4	40655	NM_028759	74106	Mm.227605	NM_028759	ENSMUSG00000026571	Dcaf6	1200006M05Rik|Iqwd1|PC326	DDB1 and CUL4 associated factor 6	protein-coding
unique_peak2-34868-10-15--0.643584654991231-0.519648556297791	chr15	77839501	77840197	+	0	NA	intron (NM_007583, intron 2 of 3)	L2b|LINE|L2	-38595	NM_018749	55944	Mm.3955	NM_018749	ENSMUSG00000016554	Eif3d	66/67kDa|AA407891|Eif3s7|eIF3p66	eukaryotic translation initiation factor 3, subunit D	protein-coding
common_peak1-12144-12-19--0.673152109799724-0.546772548767014	chr17	27908843	27909500	+	0	NA	intron (NM_001033279, intron 3 of 4)	L1MD3|LINE|L1	-43275	NM_013891	30051	Mm.26768	NM_013891	ENSMUSG00000024215	Spdef	PDEF|Pse	SAM pointed domain containing ets transcription factor	protein-coding
common_peak1-11377-93-133-0.0449806730484967-0.32106316563201	chr15	96698774	96700797	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-169656	NM_175121	67760	Mm.46754	NM_175121	ENSMUSG00000022462	Slc38a2	5033402L14Rik|AI316867|ATA2|SAT2|mKIAA1382	solute carrier family 38, member 2	protein-coding
common_peak1-13657-51-55-0.267568903544969-0.557749827489198	chr2	26932437	26933653	+	0	NA	Intergenic	Intergenic	-1856	NM_029981	77794	Mm.330088	NM_029981	ENSMUSG00000036040	Adamtsl2	A930008K15Rik|tcp-1	ADAMTS-like 2	protein-coding
unique_peak1-3622-9-2-1.60465090568306-1.87199725847353	chr19	36132182	36132556	+	0	NA	promoter-TSS (NM_008315)	promoter-TSS (NM_008315)	-519	NM_008315	15566	Mm.254266	NM_008315	ENSMUSG00000024798	Htr7	5-HT7	5-hydroxytryptamine (serotonin) receptor 7	protein-coding
common_peak2-24231-24-38--0.492192316094532-0.631311512744354	chr16	87454636	87455634	+	0	NA	promoter-TSS (NM_024258)	promoter-TSS (NM_024258)	-95	NM_024258	74112	Mm.152941	NM_024258	ENSMUSG00000025616	Usp16	1200004E02Rik|2810483I07Rik|6330514E22Rik|UBPM	ubiquitin specific peptidase 16	protein-coding
common_peak2-32059-35-37-0.183442745018919-0.398838069828027	chr9	87021987	87022504	+	0	NA	Intergenic	Intergenic	-16896	NM_001177731	244958	Mm.335337	NM_001101482	ENSMUSG00000042761	Mrap2	BB633055	melanocortin 2 receptor accessory protein 2	protein-coding
common_peak2-31015-65-68-0.383641482698958-0.968381485337565	chr8	11322621	11324504	+	0	NA	intron (NM_009932, intron 3 of 47)	intron (NM_009932, intron 3 of 47)	10733	NM_009932	12827	Mm.181021	NM_009932	ENSMUSG00000031503	Col4a2	Col4a-2	collagen, type IV, alpha 2	protein-coding
unique_peak1-2412-15-2-2.4272022498345-3.53487848679804	chr15	99540965	99541768	+	0	NA	intron (NM_031842, intron 10 of 12)	intron (NM_031842, intron 10 of 12)	-6658	NM_010271	14555	Mm.252391	NM_010271	ENSMUSG00000023019	Gpd1	AI747587|Gdc-1|Gdc1|mKIAA4010	glycerol-3-phosphate dehydrogenase 1 (soluble)	protein-coding
unique_peak2-33708-3-7--1.41398308995928-1.23214870625617	chr11	110306185	110306572	+	0	NA	intron (NM_011943, intron 1 of 11)	intron (NM_011943, intron 1 of 11)	45942	NM_011943	26399	Mm.14487	NM_011943	ENSMUSG00000020623	Map2k6	MEK6|MKK6|Prkmk6|SAPKK3	mitogen-activated protein kinase kinase 6	protein-coding
unique_peak2-35025-7-6--0.00826409175941478-0.97990265578305	chr15	102461107	102461539	+	0	NA	Intergenic	Intergenic	-5471	NM_146065	223922	Mm.208714	NM_146065	ENSMUSG00000099083	Atf7	1110012F10Rik|9430065F09Rik|AI549878|C130020M04Rik	activating transcription factor 7	protein-coding
common_peak2-25205-17-10-0.75886471956774-0.917676348953458	chr18	60660887	60661501	+	0	NA	5' UTR (NM_134133, exon 1 of 2)	5' UTR (NM_134133, exon 1 of 2)	443	NM_134133	106878	Mm.273197	NM_134133	ENSMUSG00000038059	Smim3	2010002N04Rik|AI195350|AW561905|Nid67|cI-41	small integral membrane protein 3	protein-coding
common_peak2-22405-14-12-0.198776442216552-0.373562084705529	chr13	34080032	34080731	+	0	NA	TTS (NM_001163239)	TTS (NM_001163239)	14282	NM_001243192	20719	Mm.252210	NM_009254	ENSMUSG00000060147	Serpinb6a	4930482L21Rik|D330015H01Rik|PI-6|Serpinb6|Spi3|ovalbumin	serine (or cysteine) peptidase inhibitor, clade B, member 6a	protein-coding
common_peak2-25044-15-32--1.0322293688028-1.48160942223867	chr18	31910781	31911547	+	0	NA	Intergenic	L1_Mus4|LINE|L1	-8314	NM_153515	225339	Mm.290804	NM_153515	ENSMUSG00000041915	Ammecr1l	5430429D03Rik|AU022236|AU040755|AW111353|E230022H04Rik	AMME chromosomal region gene 1-like	protein-coding
unique_peak2-34896-3-9--1.73591118484664-1.57096726280955	chr15	81677029	81677574	+	0	NA	Intergenic	Intergenic	11455	NM_020507	57259	Mm.323595	NM_020507	ENSMUSG00000048546	Tob2	2900090N22Rik|4930545K18Rik|AV071822|mKIAA1663	transducer of ERBB2, 2	protein-coding
common_peak2-27019-106-184--0.193614605510593-0.604990102761686	chr2	173274150	173277174	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	-72431	NM_028158	72221	Mm.46132	NM_028158	ENSMUSG00000027518	1700021F07Rik	-	RIKEN cDNA 1700021F07 gene	protein-coding
common_peak1-7861-37-65--0.518401047872635-1.01073730818493	chr1	133131219	133132220	+	0	NA	intron (NM_018750, intron 1 of 5)	intron (NM_018750, intron 1 of 5)	10036	NM_018750	54354	Mm.248291	NM_018750	ENSMUSG00000026430	Rassf5	1300019G20Rik|AU042887|Maxp1|Nore1|Nore1A|Nore1B|Rapl	Ras association (RalGDS/AF-6) domain family member 5	protein-coding
unique_peak1-2557-7-0-2.79909083029819-2.40823996531185	chr16	24130532	24131012	+	0	NA	Intergenic	MLT1G|LTR|MaLR	-142074	NM_009744	12053	Mm.347398	NM_009744	ENSMUSG00000022508	Bcl6	Bcl5	B cell leukemia/lymphoma 6	protein-coding
common_peak1-11922-272-484-0.0551407630785548-0.388949863541151	chr17	46855213	46858949	+	0	NA	intron (NM_145488, intron 3 of 16)	intron (NM_145488, intron 3 of 16)	8669	NM_145488	224824	Mm.299399	NM_145488	ENSMUSG00000002763	Pex6	AI132582|D130055I09Rik|mKIAA4177	peroxisomal biogenesis factor 6	protein-coding
common_peak2-22859-38-66--0.494636531159242-0.920775588791488	chr14	26579536	26580251	+	0	NA	intron (NM_001101433, intron 1 of 3)	intron (NM_001101433, intron 1 of 3)	8449	NM_001101433	71918	Mm.41904	NM_001101433	ENSMUSG00000055538	Zcchc24	2310047A01Rik	zinc finger, CCHC domain containing 24	protein-coding
common_peak1-15433-22-21-0.187852486450107-0.376654945067947	chr4	89051823	89052618	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-95279	NM_007670	12579	Mm.423094	NM_007670	ENSMUSG00000073802	Cdkn2b	AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b	cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)	protein-coding
unique_peak1-6590-7-2-1.21412832957703-1.45399745587252	chr7	144038170	144038600	+	0	NA	Intergenic	Intergenic	-47909	NM_008598	17314	Mm.440219	NM_008598	ENSMUSG00000054612	Mgmt	AGT|AI267024|Agat	O-6-methylguanine-DNA methyltransferase	protein-coding
unique_peak2-38490-3-6--1.22133801201688-1.08602067057793	chr7	35084541	35084987	+	0	NA	Intergenic	Intergenic	-14136	NM_172741	233103	Mm.491097	NM_172741	ENSMUSG00000066571	4931406P16Rik	AA553327|mKIAA0355	RIKEN cDNA 4931406P16 gene	protein-coding
unique_peak1-4266-10-1-2.35641534500877-2.57096726280955	chr2	131758506	131759093	+	0	NA	intron (NM_001278256, intron 3 of 3)	intron (NM_001278256, intron 3 of 3)	-17798	NM_001278257	26434	Mm.180750	NM_023043	ENSMUSG00000027338	Prnd	AI450264|Dpl|PrPLP|doppel	prion protein dublet	protein-coding
common_peak1-10947-7-9--0.522837264589173-1.05908390183068	chr15	25457440	25457961	+	0	NA	Intergenic	ORR1E|LTR|MaLR	-94605	NM_019472	17909	Mm.60590	NM_019472	ENSMUSG00000022272	Myo10	AW048724|D15Ertd600e|mKIAA0799	myosin X	protein-coding
common_peak1-15808-45-74--0.368460665151009-0.72320139087996	chr5	30850026	30851467	+	0	NA	Intergenic	Intergenic	-2537	NM_028483	73259	Mm.443299	NM_028483	ENSMUSG00000053194	Cib4	1700041E20Rik	calcium and integrin binding family member 4	protein-coding
unique_peak1-1411-22-5-2.06232160436625-3.46164246247458	chr12	79384304	79385253	+	0	NA	intron (NM_145965, intron 1 of 22)	Lx2|LINE|L1	57136	NM_145965	268566	Mm.341742	NM_145965	ENSMUSG00000047454	Gphn	5730552E08Rik|AI662856|BC027112|C230040D23|GPH|GPHRYN|geph	gephyrin	protein-coding
common_peak2-25245-10-14--0.550475250599749-0.446472590016315	chr18	64986610	64987358	+	0	NA	Intergenic	MER89|LTR|ERV1	-60426	NM_001114386	83814	Mm.98668	NM_031881	ENSMUSG00000024589	Nedd4l	1300012C07Rik|Nedd4-2|Nedd4b	neural precursor cell expressed, developmentally down-regulated gene 4-like	protein-coding
common_peak2-26954-50-84--0.368450619658749-0.771200261870372	chr2	164879272	164879857	+	0	NA	Intergenic	ORR1C2|LTR|MaLR	-1572	NM_170704	21939	Mm.271833	NM_011611	ENSMUSG00000017652	Cd40	AI326936|Bp50|GP39|HIGM1|IGM|IMD3|T-BAM|TRAP|Tnfrsf5|p50	CD40 antigen	protein-coding
common_peak1-19269-6-22--1.95816384567671-2.41165147706372	chr9	114688683	114689084	+	0	NA	intron (NM_001252479, intron 1 of 3)	B3A|SINE|B2	2228	NM_133978	102545	Mm.35600	NM_133978	ENSMUSG00000032436	Cmtm7	AI481279|Cklfsf7|LNV	CKLF-like MARVEL transmembrane domain containing 7	protein-coding
common_peak2-22521-10-8-0.186490343566457-1.078512453669	chr13	54693630	54693916	+	0	NA	TTS (NM_028870)	TTS (NM_028870)	2181	NM_025933	67044	Mm.29353	NM_025933	ENSMUSG00000025868	Higd2a	2010110M21Rik|AA690237	HIG1 domain family, member 2A	protein-coding
common_peak2-25747-16-22--0.405298313788951-0.440610794044987	chr19	28963754	28964467	+	0	NA	intron (NM_009199, intron 2 of 11)	intron (NM_009199, intron 2 of 11)	54454	NM_009199	20510	Mm.246670	NM_009199	ENSMUSG00000024935	Slc1a1	D130048G10Rik|EAAC1|EAAC2|EAAT3|MEAAC1	solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	protein-coding
common_peak1-7717-31-10-1.76580705217583-3.88430425937119	chr1	87900285	87901599	+	0	NA	Intergenic	L1Md_T|LINE|L1	-17575	NM_001122732	70060	Mm.196313	NM_027029	ENSMUSG00000026226	Spata3	1700011N12Rik|1700029H01Rik|4930424D10Rik|Mtsarg1|Tsarg1	spermatogenesis associated 3	protein-coding
common_peak2-30944-10-12--0.344024373132323-0.340565874754526	chr8	14089756	14090307	+	0	NA	intron (NM_001034862, intron 1 of 5)	intron (NM_001034862, intron 1 of 5)	296	NM_001034862	234086	Mm.268896	NM_001034862	ENSMUSG00000051978	Erich1	-	glutamate rich 1	protein-coding
common_peak1-9301-62-75-0.162823945358499-0.436835517045436	chr11	93884934	93886883	+	0	NA	intron (NM_027569, intron 2 of 28)	intron (NM_027569, intron 2 of 28)	-19611	NM_001025430	70834	Mm.260737	NM_027569	ENSMUSG00000020859	Spag9	3110018C07Rik|4733401I23Rik|4831406C20Rik|AW552012|JLP|JSAP2|JSAP2a|Jip4|Mapk8ip4|syd1	sperm associated antigen 9	protein-coding
unique_peak2-32906-6-8--0.60452689106201-1.03789460276074	chr10	20104159	20104678	+	0	NA	Intergenic	Intergenic	36793	NM_027930	71804	Mm.262151	NM_027930	ENSMUSG00000019992	Mtfr2	2610016C23Rik|4933412C16Rik|Dufd1|Fam54a	mitochondrial fission regulator 2	protein-coding
common_peak2-28934-20-41--0.904242638187568-1.56490221051684	chr5	96801354	96802454	+	0	NA	Intergenic	Intergenic	-1070	NM_175473	231470	Mm.291120	NM_175473	ENSMUSG00000034687	Fras1	E130113P14Rik|bl|mKIAA1500	Fraser syndrome 1 homolog (human)	protein-coding
common_peak1-17760-12-9-0.326847890200276-0.459837087125828	chr7	89738623	89739294	+	0	NA	intron (NM_001190374, intron 23 of 29)	intron (NM_001190374, intron 23 of 29)	58080	NM_177894	330577	Mm.222812	NM_177894	ENSMUSG00000038570	Fam154b	1700129I04Rik|D030069K18	family with sequence similarity 154, member B	protein-coding
common_peak1-19193-7-12--0.901348887842903-1.31827279259406	chr9	99702472	99702981	+	0	NA	Intergenic	Intergenic	73863	NM_011440	20669	Mm.261595	NM_011440	ENSMUSG00000053747	Sox14	-	SRY (sex determining region Y)-box 14	protein-coding
common_peak1-16406-59-55-0.518009078814974-1.31216754501451	chr5	125391946	125393214	+	0	NA	Intergenic	Intergenic	49505	NM_001081750	269704	Mm.138617	NM_001081750	ENSMUSG00000079215	Zfp664	AW060232|D930038J03Rik|ZFOC1|Znf664	zinc finger protein 664	protein-coding
common_peak2-27809-15-15-0.0121647505556561-0.30803596071496	chr3	144569729	144570286	+	0	NA	Intergenic	MusHAL1|LINE|L1	-11032	NM_001039222	622139	Mm.447150	NM_001039222	ENSMUSG00000074196	Gm6289	EG622139	predicted gene 6289	protein-coding
common_peak1-8177-9-12--0.510826311736872-0.394412252720706	chr10	27983837	27984324	+	0	NA	intron (NM_008983, intron 3 of 31)	intron (NM_008983, intron 3 of 31)	189454	NM_008983	19272	Mm.332303	NM_008983	ENSMUSG00000019889	Ptprk	AI853699|PTPk|RPTPkappa	protein tyrosine phosphatase, receptor type, K	protein-coding
unique_peak2-36676-2-8--2.08737925770563-1.65811743852845	chr3	31019377	31019827	+	0	NA	3' UTR (NM_011386, exon 7 of 7)	3' UTR (NM_011386, exon 7 of 7)	25622	NM_001039090	20482	Mm.15406	NM_011386	ENSMUSG00000027660	Skil	Skir|SnoN|sno	SKI-like	protein-coding
common_peak2-24032-12-9-0.326847890200276-0.459837087125828	chr16	23402636	23403145	+	0	NA	Intergenic	RLTR23|LTR|ERV1	-26316	NM_001004151	239766	Mm.208751	NM_001004151	ENSMUSG00000033383	Rtp1	Gm1766|Gm604	receptor transporter protein 1	protein-coding
unique_peak1-426-9-2-1.60465090568306-1.87199725847353	chr1	162014890	162015407	+	0	NA	TTS (NM_177839)	TTS (NM_177839)	-7032	NR_038031	75255	Mm.414845	NR_038030	ENSMUSG00000026729	4930562F07Rik	-	RIKEN cDNA 4930562F07 gene	ncRNA
common_peak2-24592-6-9--0.75652998450706-1.11707584880836	chr17	31937164	31937624	+	0	NA	Intergenic	Intergenic	55343	NM_010831	17691	Mm.290941	NM_010831	ENSMUSG00000024042	Sik1	Msk|Sik|Snf1lk	salt inducible kinase 1	protein-coding
unique_peak2-36286-2-5--1.50241675698448-1.08602067057793	chr2	69414986	69415408	+	0	NA	intron (NM_001081088, intron 1 of 78)	Lx5|LINE|L1	8927	NM_001081088	14725	Mm.23847	NM_001081088	ENSMUSG00000027070	Lrp2	AI315343|AW536255|D230004K18Rik|Gp330|Megalin|b2b1625.2Clo	low density lipoprotein receptor-related protein 2	protein-coding
unique_peak1-973-15-0-4.01216475055566-5.11750992628768	chr11	62552465	62553072	+	0	NA	Intergenic	L1M2|LINE|L1	-10173	NM_133208	170740	Mm.339982	NM_133208		Zfp287	B230333C16Rik|SKAT-2|Skat2|Znf287|mszf16|mszf74	zinc finger protein 287	protein-coding
unique_peak2-38571-2-8--2.08737925770563-1.65811743852845	chr7	66437873	66438297	+	0	NA	Intergenic	L1_Mur2|LINE|L1	-46035	NM_173010	22215	Mm.9002	NM_011668	ENSMUSG00000025326	Ube3a	4732496B02|5830462N02Rik|A130086L21Rik|Hpve6a|mKIAA4216	ubiquitin protein ligase E3A	protein-coding
common_peak2-29526-14-6-1.09186123830004-1.16633110333236	chr6	37465660	37466072	+	0	NA	Intergenic	L1VL1|LINE|L1	-14307	NM_145364	208665	Mm.262635	NM_145364	ENSMUSG00000038641	Akr1d1	-	aldo-keto reductase family 1, member D1	protein-coding
unique_peak1-518-12-0-3.64877598508764-4.21441993929574	chr1	184005664	184006467	+	0	NA	Intergenic	Intergenic	-48803	NM_012058	27058	Mm.303071	NM_012058	ENSMUSG00000026511	Srp9	9kDa	signal recognition particle 9	protein-coding
common_peak2-29129-22-31--0.352715894912595-0.440892966163086	chr5	124424818	124426027	+	0	NA	intron (NM_145070, intron 1 of 31)	intron (NM_145070, intron 1 of 31)	1785	NM_145070	29816	Mm.149954	NM_145070	ENSMUSG00000000915	Hip1r	AA410023|mKIAA0655	huntingtin interacting protein 1 related	protein-coding
common_peak2-28879-38-41-0.17913523651977-0.420706537898431	chr5	81021469	81022765	+	0	NA	Intergenic	Intergenic	-428501	NM_198702	319387	Mm.273631	NM_198702	ENSMUSG00000037605	Lphn3	5430402I23Rik|CIRL-3|D130075K09Rik|Gm1379|LEC3|mKIAA0768	latrophilin 3	protein-coding
common_peak2-31195-34-111--1.42528639505634-7.30815125919128	chr8	57511827	57512756	+	0	NA	Intergenic	Intergenic	873470	NM_175939	244486	Mm.67684	NM_175939	ENSMUSG00000046258	Adam29	-	a disintegrin and metallopeptidase domain 29	protein-coding
unique_peak2-37087-2-5--1.50241675698448-1.08602067057793	chr3	152306188	152306430	+	0	NA	intron (NM_001081277, intron 5 of 13)	AT_rich|Low_complexity|Low_complexity	-23568	NR_040386	99542	Mm.394921	NR_040386	ENSMUSG00000097745	AI115009	-	expressed sequence AI115009	ncRNA
unique_peak1-2491-9-4-0.867685311516858-1.36011389749466	chr16	10542441	10542964	+	0	NA	exon (NM_021428, exon 1 of 2)	exon (NM_021428, exon 1 of 2)	445	NM_021428	58239	Mm.353006	NM_021428	ENSMUSG00000038055	Dexi	1810029J14Rik|AI836170|AW413143|D16Bwg0586e|Myle	dexamethasone-induced transcript	protein-coding
unique_peak1-829-10-2-1.77145284428761-2.09384600808989	chr11	8581938	8582487	+	0	NA	Intergenic	Intergenic	-17674	NM_001083587	319939	Mm.337820	NM_001083587	ENSMUSG00000020422	Tns3	BC023928|F830010I22Rik|TEM6|Tens1	tensin 3	protein-coding
common_peak2-31707-24-55--1.01414501928989-2.24341076832583	chr9	75070756	75072118	+	0	NA	TTS (NM_010864)	TTS (NM_010864)	-8384	NM_001081322	208943	Mm.41339	NM_001081322	ENSMUSG00000033590	Myo5c	9130003O20Rik|BB085560|C330029I24	myosin VC	protein-coding
unique_peak2-35773-2-7--1.91745425626332-1.45399745587252	chr18	46155535	46155972	+	0	NA	intron (NR_040342, intron 2 of 3)	intron (NR_040342, intron 2 of 3)	49161	NR_040342	107003	Mm.395148	NR_040342		A330093E20Rik	AU043608	RIKEN cDNA A330093E20 gene	ncRNA
unique_peak1-4397-13-5-1.19350952991661-1.95509489018123	chr2	165633277	165633947	+	0	NA	intron (NM_001291158, intron 15 of 23)	intron (NM_001291158, intron 15 of 23)	50061	NM_001252585	228880	Mm.227598	NM_027230	ENSMUSG00000039671	Zmynd8	1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7	zinc finger, MYND-type containing 8	protein-coding
common_peak2-31481-10-13--0.450939577048835-0.386243247519795	chr8	106400851	106401458	+	0	NA	Intergenic	Intergenic	-224371	NM_009868	12562	Mm.21767	NM_009868	ENSMUSG00000031871	Cdh5	7B4|AA408225|Cd144|VE-Cad|VECD|VEcad|Vec	cadherin 5	protein-coding
common_peak1-15331-12-9-0.326847890200276-0.459837087125828	chr4	46641471	46642211	+	0	NA	intron (NM_198664, intron 4 of 12)	intron (NM_198664, intron 4 of 12)	21230	NM_198664	381605	Mm.331595	NM_198664	ENSMUSG00000039813	Tbc1d2	A630005A06Rik|BC022630|Gm1037|PARIS-1|PARIS1	TBC1 domain family, member 2	protein-coding
common_peak1-15629-20-19-0.16614668970383-0.348739088570342	chr4	133672410	133673278	+	0	NA	intron (NR_045571, intron 8 of 13)	intron (NR_045571, intron 8 of 13)	11824	NM_080559	73723	Mm.22240	NM_080559	ENSMUSG00000028843	Sh3bgrl3	1110004L05Rik|AU022188	SH3 domain binding glutamic acid-rich protein-like 3	protein-coding
common_peak2-29443-10-8-0.186490343566457-1.078512453669	chr6	17306891	17307398	+	0	NA	Intergenic	Lx7|LINE|L1	49504	NM_001243064	12389	Mm.28278	NM_007616	ENSMUSG00000007655	Cav1	Cav|Cav-1	caveolin 1, caveolae protein	protein-coding
unique_peak2-39729-7-6--0.00826409175941478-0.97990265578305	chr9	121953751	121954160	+	0	NA	Intergenic	(TGGA)n|Simple_repeat|Simple_repeat	-48811	NM_153540	215494	Mm.402151	NM_153540	ENSMUSG00000066235	Pomgnt2	Ago61|C85492|Gtdc2	protein O-linked mannose beta 1,4-N-acetylglucosaminyltransferase 2	protein-coding
unique_peak1-2902-14-1-2.89921616035764-3.91338994363176	chr17	45807544	45808289	+	0	NA	intron (NM_198167, intron 10 of 23)	intron (NM_198167, intron 10 of 23)	-11658	NM_001013767	268958	Mm.426026	NM_001013767	ENSMUSG00000058626	Capn11	-	calpain 11	protein-coding
unique_peak2-39360-3-7--1.41398308995928-1.23214870625617	chr9	7857643	7858106	+	0	NA	intron (NM_007464, intron 4 of 8)	intron (NM_007464, intron 4 of 8)	15296	NM_007464	11796	Mm.2026	NM_007464	ENSMUSG00000032000	Birc3	AW107670|Api1|Api2|Birc2|HIAP2|IAP1|IAP2|MIAP1|MIAP2|MIHB|MIHC|RNF49|cIAP-1|cIAP-2|cIAP1|cIAP2	baculoviral IAP repeat-containing 3	protein-coding
common_peak1-7632-13-32--1.26592208872068-1.87214134458702	chr1	64691116	64691728	+	0	NA	Intergenic	Lx5|LINE|L1	-27680	NM_025964	67099	Mm.46394	NM_025964	ENSMUSG00000025956	Mettl21a	2310038H17Rik|AI464204|Fam119a	methyltransferase like 21A	protein-coding
common_peak1-8747-37-26-0.771105569322351-1.52341724501298	chr11	4266482	4267593	+	0	NA	intron (NM_029458, intron 10 of 10)	intron (NM_029458, intron 10 of 10)	74048	NM_029458	75828	Mm.159592	NM_029458	ENSMUSG00000020419	Hormad2	4930529M09Rik	HORMA domain containing 2	protein-coding
unique_peak1-6821-12-0-3.64877598508764-4.21441993929574	chr8	75351448	75352032	+	0	NA	intron (NM_010687, intron 12 of 14)	intron (NM_010687, intron 12 of 14)	65961	NM_007975	14065	Mm.12948	NM_007975	ENSMUSG00000050147	F2rl3	PAR4	coagulation factor II (thrombin) receptor-like 3	protein-coding
common_peak1-13340-39-47-0.0307987461979975-0.310078451983505	chr19	44106786	44107703	+	0	NA	Intergenic	LTR16E1|LTR|ERVL	-3507	NM_001167905	226143	Mm.329866	NM_001001446	ENSMUSG00000025197	Cyp2c44	AW107714|BC034834|b2b386Clo	cytochrome P450, family 2, subfamily c, polypeptide 44	protein-coding
common_peak1-7564-8-6-0.197867495889966-1.03789460276074	chr1	43142063	43142640	+	0	NA	intron (NM_001013025, intron 2 of 12)	MT2B2|LTR|ERVL	13116	NM_001013025	73122	Mm.246069	NM_001013025	ENSMUSG00000070939	Tgfbrap1	3110018K12Rik|AU024090|AU042859|AW742551|Trap1	transforming growth factor, beta receptor associated protein 1	protein-coding
unique_peak2-38399-4-7--1.02346051385325-1.09384600808989	chr7	19669138	19669675	+	0	NA	exon (NM_001190491, exon 1 of 13)	exon (NM_001190491, exon 1 of 13)	208	NM_001190491	13400	Mm.6529	NM_032418	ENSMUSG00000030409	Dmpk	DM|DMK|Dm15|MDPK|MT-PK	dystrophia myotonica-protein kinase	protein-coding
common_peak2-26662-14-38--1.3861860585046-2.54214423428716	chr2	121449209	121450309	+	0	NA	intron (NM_172673, intron 1 of 14)	MTD|LTR|MaLR	117300	NM_001290986	241627	Mm.293284	NM_030234	ENSMUSG00000027242	Wdr76	5830411K18Rik|6030457D09|AA517836	WD repeat domain 76	protein-coding
common_peak2-25139-25-21-0.402418286707809-0.580176690544129	chr18	42275326	42276059	+	0	NA	intron (NM_001146299, intron 4 of 8)	intron (NM_001146299, intron 4 of 8)	62328	NM_001146299	269016	Mm.45472	NM_172966	ENSMUSG00000057719	Sh3rf2	2310046K19|9130023G24Rik|AI452083|Ppp1r39|RNF158	SH3 domain containing ring finger 2	protein-coding
common_peak2-25267-41-79--0.620779390038702-1.51813377769487	chr18	67723736	67724691	+	0	NA	Intergenic	(CAAAAA)n|Simple_repeat|Simple_repeat	-11838	NM_194355	68166	Mm.208723	NM_176832	ENSMUSG00000024533	Spire1	6030430B19Rik|AI415299|AU022898|AW550622|Spir-1	spire homolog 1 (Drosophila)	protein-coding
unique_peak2-36665-10-9-0.0344872501214071-1.05503135781948	chr3	27858920	27859465	+	0	NA	intron (NM_001164056, intron 2 of 26)	ID_B1|SINE|B4	21590	NM_001164056	18805	Mm.212039	NM_008875	ENSMUSG00000027695	Pld1	AA536939|C85393|Pld1a|Pld1b	phospholipase D1	protein-coding
common_peak2-22814-38-36-0.36199929366958-0.674559023890888	chr14	16248990	16249942	+	0	NA	intron (NM_146052, intron 1 of 1)	intron (NM_146052, intron 1 of 1)	22035	NM_146052	218763	Mm.138039	NM_146052	ENSMUSG00000045201	Lrrc3b	BC019794|LRP15	leucine rich repeat containing 3B	protein-coding
common_peak1-11984-20-19-0.16614668970383-0.348739088570342	chr17	10840207	10840847	+	0	NA	intron (NM_027032, intron 2 of 4)	IAPLTR2_Mm|LTR|ERVK	191445	NR_077238	319750	Mm.383485	NR_077237	ENSMUSG00000089633	A230009B12Rik	-	RIKEN cDNA A230009B12 gene	ncRNA
common_peak1-16916-48-31-0.970927151234815-2.71449847414464	chr6	72926873	72927976	+	0	NA	Intergenic	Intergenic	-18682	NM_001190327	19240	Mm.3532	NM_025284	ENSMUSG00000079523	Tmsb10	Ptmb10|Tb10	thymosin, beta 10	protein-coding
common_peak2-27392-19-28--0.455293668465885-0.518921928796332	chr3	87930226	87930815	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-15797	NM_133665	17261	Mm.28184	NM_133665	ENSMUSG00000001419	Mef2d	C80750	myocyte enhancer factor 2D	protein-coding
common_peak1-7486-10-12--0.344024373132323-0.340565874754526	chr1	7089204	7089693	+	0	NA	intron (NM_183028, intron 1 of 5)	intron (NM_183028, intron 1 of 5)	10447	NM_183028	319263	Mm.21539	NM_183028	ENSMUSG00000051285	Pcmtd1	8430411F12Rik|A030012M09Rik	protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	protein-coding
common_peak1-14957-7-7--0.200909169701811-0.97990265578305	chr3	104531430	104531952	+	0	NA	Intergenic	Intergenic	48774	NM_183224	329731	Mm.389494	NM_183224	ENSMUSG00000055865	Fam19a3	7530404M11Rik|TAFA3|Tafa-3	family with sequence similarity 19, member A3	protein-coding
common_peak2-25551-14-13-0.0918612383000403-0.332077462497413	chr19	6235395	6236279	+	0	NA	promoter-TSS (NM_198168)	promoter-TSS (NM_198168)	3	NM_198168	225849	Mm.118076	NM_198168	ENSMUSG00000024777	Ppp2r5b	B'beta|BC026670	protein phosphatase 2, regulatory subunit B', beta	protein-coding
common_peak2-20366-21-32--0.474904854092218-0.550049347815239	chr10	12922603	12923262	+	0	NA	Intergenic	Intergenic	-9989	NM_181470	353258	Mm.117581	NM_181470	ENSMUSG00000019814	Ltv1	2610020N02Rik	LTV1 homolog (S. cerevisiae)	protein-coding
common_peak2-26960-12-19--0.673152109799724-0.546772548767014	chr2	165643644	165644467	+	0	NA	intron (NM_001291158, intron 13 of 23)	intron (NM_001291158, intron 13 of 23)	39618	NM_001252585	228880	Mm.227598	NM_027230	ENSMUSG00000039671	Zmynd8	1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7	zinc finger, MYND-type containing 8	protein-coding
common_peak2-22339-38-53--0.183434842864938-0.354801288549198	chr13	23584862	23586104	+	0	NA	Intergenic	Intergenic	-4757	NM_001289614	238555	Mm.129668	NM_175938		Btn2a2	Btn2|D030063K05	butyrophilin, subfamily 2, member A2	protein-coding
common_peak2-26013-49-48-0.391573978909975-0.799068699966534	chr19	56821645	56822245	+	0	NA	Intergenic	MTE2b|LTR|MaLR	25083	NM_007419	11554	Mm.46797	NM_007419	ENSMUSG00000035283	Adrb1	Adrb-1|beta-AR	adrenergic receptor, beta 1	protein-coding
common_peak1-9607-31-39--0.0966894240742393-0.312460117298692	chr11	120548954	120549904	+	0	NA	intron (NM_026877, intron 5 of 15)	intron (NM_026877, intron 5 of 15)	11454	NM_001164224	68938	Mm.294020	NM_026877	ENSMUSG00000025142	Aspscr1	1190006K01Rik|ASPC|ASPCR1|ASPL|ASPS|RCC17|TUG	alveolar soft part sarcoma chromosome region, candidate 1 (human)	protein-coding
unique_peak2-36221-7-9--0.522837264589173-1.05908390183068	chr2	35478303	35478879	+	0	NA	intron (NM_001290641, intron 1 of 15)	intron (NM_001290641, intron 1 of 15)	1090	NM_001114124	69601	Mm.29629	NM_001001602	ENSMUSG00000026883	Dab2ip	2310011D08Rik|AI480459|Aip1|mKIAA1743	disabled 2 interacting protein	protein-coding
common_peak1-14343-18-24--0.330937038546373-0.380101753845076	chr2	164785466	164786474	+	0	NA	Intergenic	L2a|LINE|L2	-7518	NM_020333	57138	Mm.252987	NM_020333	ENSMUSG00000017740	Slc12a5	KCC2|mKIAA1176	solute carrier family 12, member 5	protein-coding
unique_peak1-2686-8-0-3.00522241794757-2.70926996097583	chr16	75712831	75713355	+	0	NA	Intergenic	Lx6|LINE|L1	53970	NR_027492	110920	Mm.26704	NM_030201	ENSMUSG00000032932	Hspa13	1600002I10Rik|AV006182|B230217N24Rik|Stch	heat shock protein 70 family, member 13	protein-coding
unique_peak2-34750-2-7--1.91745425626332-1.45399745587252	chr15	54916890	54917287	+	0	NA	intron (NM_183089, intron 4 of 8)	intron (NM_183089, intron 4 of 8)	4945	NM_183089	72107	Mm.486550	NM_183089	ENSMUSG00000022422	Dscc1	2010006I05Rik|2600005O03Rik|Dcc1	defective in sister chromatid cohesion 1 homolog (S. cerevisiae)	protein-coding
common_peak2-26224-11-11--0.0762689164695427-0.301029995663976	chr2	27326881	27327324	+	0	NA	intron (NM_001113574, intron 1 of 12)	intron (NM_001113574, intron 1 of 12)	3816	NM_023336	67382	Mm.28721	NM_023336	ENSMUSG00000026918	Brd3	2410084F24Rik|AW060456|Fsrg2|ORFX|RINGL3	bromodomain containing 3	protein-coding
common_peak2-28560-60-151--0.893635651823054-4.80534432304259	chr5	5379146	5381181	+	0	NA	promoter-TSS (NM_011074)	promoter-TSS (NM_011074)	88	NM_011074	18647	Mm.389061	NM_011074	ENSMUSG00000028926	Cdk14	Pftk1|mKIAA0834	cyclin-dependent kinase 14	protein-coding
unique_peak2-33860-4-15--2.02346051385325-2.4322161449009	chr12	19243672	19244405	+	0	NA	Intergenic	Intergenic	722722	NM_001201330	236366	Mm.352227	NM_001033157		5730507C01Rik	-	RIKEN cDNA 5730507C01 gene	protein-coding
unique_peak2-33716-9-13--0.617741515653384-0.459837087125828	chr11	113536151	113536920	+	0	NA	intron (NM_138598, intron 2 of 2)	B1_Mur3|SINE|Alu	8930	NM_138598	28081	Mm.351688	NM_138598	ENSMUSG00000041629	Fam104a	D11Wsu99e	family with sequence similarity 104, member A	protein-coding
common_peak1-16589-10-21--1.10301627362853-1.16735254179725	chr5	148632990	148633502	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-38958	NM_025624	66537	Mm.332855	NM_025624	ENSMUSG00000029649	Pomp	2510048O06Rik|Ump1	proteasome maturation protein	protein-coding
common_peak2-25845-2-6--1.72480917832092-1.26211192963361	chr19	41846810	41847046	+	0	NA	intron (NM_001163495, intron 10 of 10)	ID4_|SINE|ID	25477	NR_040320	100502871	Mm.394485	NR_040320		Gm19424	-	predicted gene, 19424	ncRNA
unique_peak1-2546-18-10-0.853487532591054-1.03889213727317	chr16	23226304	23227258	+	0	NA	intron (NM_001252505, intron 1 of 7)	intron (NM_001252505, intron 1 of 7)	687	NM_001252505	20440	Mm.149029	NM_145933	ENSMUSG00000022885	St6gal1	AW742324|Siat1|St6Gal-I|St6gal|St6galI	beta galactoside alpha 2,6 sialyltransferase 1	protein-coding
common_peak1-16808-62-96--0.189161383385043-0.446284217035615	chr6	47762946	47764528	+	0	NA	promoter-TSS (NM_009787)	promoter-TSS (NM_009787)	-226	NM_009787	12304	Mm.2442	NM_009787	ENSMUSG00000025823	Pdia4	AI987846|Cai|ERp-72|Erp72	protein disulfide isomerase associated 4	protein-coding
unique_peak2-39297-2-12--2.61789397440441-2.55640854263862	chr8	123342949	123343554	+	0	NA	Intergenic	Intergenic	82975	NM_008320	15900	Mm.334861	NM_008320	ENSMUSG00000041515	Irf8	AI893568|ICSBP|IRF-8|Icsbp1|Myls	interferon regulatory factor 8	protein-coding
common_peak2-24671-63-137--0.67021186570758-2.7450855957908	chr17	36942123	36944132	+	0	NA	Intergenic	L1VL2|LINE|L1	-5993	NM_201611	399549	Mm.329034	NM_201611	ENSMUSG00000037130	H2-M10.6	-	histocompatibility 2, M region locus 10.6	protein-coding
common_peak2-27858-19-22--0.120874629395327-0.306080386793804	chr3	152589122	152590104	+	0	NA	intron (NM_012028, intron 2 of 4)	intron (NM_012028, intron 2 of 4)	55558	NM_012028	26938	Mm.40915	NM_012028		St6galnac5	AI851940|Siat7e	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	protein-coding
common_peak2-30529-16-9-0.796335547380699-0.844317084070804	chr7	66586068	66586460	+	0	NA	Intergenic	L1M2|LINE|L1	-6745	NR_015479	330544	Mm.9002	NR_015479		C230091D08Rik	-	RIKEN cDNA C230091D08 gene	ncRNA
common_peak2-19596-36-62--0.497958837332162-0.890023188174771	chr1	23921577	23922636	+	0	NA	intron (NM_028534, intron 1 of 9)	intron (NM_028534, intron 1 of 9)	-5531	NM_001290683	98366	Mm.329963	NM_028534	ENSMUSG00000026155	Smap1	1700056O10Rik|4921514B13Rik|4921525H11Rik|AI462175	small ArfGAP 1	protein-coding
unique_peak2-36461-2-6--1.72480917832092-1.26211192963361	chr2	142876882	142877254	+	0	NA	Intergenic	L1VL2|LINE|L1	-11737	NM_021335	20639	Mm.1323	NM_021335		Snrpb2	2810052G09Rik	U2 small nuclear ribonucleoprotein B	protein-coding
unique_peak2-39359-3-5--0.998945590680433-0.96108193396963	chr9	6645634	6645992	+	0	NA	Intergenic	Intergenic	-379266	NM_027942	71829	Mm.141452	NM_027942	ENSMUSG00000047619	Ddi1	1700011N24Rik	DDI1, DNA-damage inducible 1, homolog 1 (S. cerevisiae)	protein-coding
unique_peak2-35431-5-7--0.704380336005853-1.01466476204226	chr17	34898182	34898527	+	0	NA	Intergenic	ETnERV2-int|LTR|ERVK	-17512	NM_009780	12268	Mm.477109	NM_009780	ENSMUSG00000073418	C4b	C4|Ss	complement component 4B (Chido blood group)	protein-coding
unique_peak2-36879-9-7-0.18961340640422-1.05908390183068	chr3	94780923	94781367	+	0	NA	intron (NM_001293716, intron 1 of 9)	intron (NM_001293716, intron 1 of 9)	2492	NM_001293716	107650	Mm.217222	NM_175356	ENSMUSG00000038861	Pi4kb	ESTM41|PI4K-beta|PI4Kbeta|Pik4cb	phosphatidylinositol 4-kinase, catalytic, beta polypeptide	protein-coding
unique_peak2-35269-4-5--0.608423014574403-0.909929411522249	chr17	3206787	3207165	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	92004	NM_134123	106583	Mm.124373	NM_134123	ENSMUSG00000046201	Scaf8	A630086M08Rik|A930036P18Rik|AA408306|AI447644|AI448652|AU015035|Rbm16|mKIAA1116	SR-related CTD-associated factor 8	protein-coding
unique_peak1-4255-8-9--0.316705676939792-1.03275496310833	chr2	129186289	129186812	+	0	NA	Intergenic	Intergenic	-9088	NR_015474	329514	Mm.207315	NM_177848	ENSMUSG00000074805	Il1bos	9430083I22|Gm14047|OTTMUSG00000015529	interleukin 1 beta, opposite strand	ncRNA
common_peak1-11682-30-51--0.530764308649219-0.865433649227648	chr16	30069540	30070622	+	0	NA	Intergenic	Intergenic	4638	NM_008235	15205	Mm.390859	NM_008235	ENSMUSG00000022528	Hes1	Hry|bHLHb39	hairy and enhancer of split 1 (Drosophila)	protein-coding
common_peak2-31552-17-18--0.0296311752385474-0.306899554715732	chr8	111875982	111876867	+	0	NA	Intergenic	Intergenic	-11616	NR_002928	384864	Mm.390083	NR_002928		Gm1943	-	WD repeat domain 70 pseudogene	pseudo
common_peak2-28493-9-9--0.132314688483142-1.03275496310833	chr4	155992375	155992766	+	0	NA	Intergenic	Intergenic	-383604	NM_198305	231003	Mm.423038	NM_198305	ENSMUSG00000078484	Klhl17	AL022703|BC058738	kelch-like 17	protein-coding
common_peak1-7620-14-29--1.00767443525087-1.28534286439185	chr1	60566959	60567777	+	0	NA	intron (NM_001045513, intron 4 of 13)	intron (NM_001045513, intron 4 of 13)	56241	NM_001045513	77300	Mm.440325	NM_001045513	ENSMUSG00000026014	Raph1	9430025M21Rik|C730009O10Rik|Lpd	Ras association (RalGDS/AF-6) and pleckstrin homology domains 1	protein-coding
common_peak1-19370-8-13--0.802132504110034-0.562038191119711	chrX	19905064	19905523	+	0	NA	Intergenic	Intergenic	-36314	NM_133669	19889	Mm.288141	NM_133669	ENSMUSG00000060090	Rp2h	AI662636|Rp2	retinitis pigmentosa 2 homolog (human)	protein-coding
unique_peak2-34098-6-8--0.60452689106201-1.03789460276074	chr13	13439133	13439561	+	0	NA	Intergenic	L1Md_F2|LINE|L1	46544	NM_031999	83924	Mm.379269	NM_031999	ENSMUSG00000021306	Gpr137b	AI788917|AU016435|AW546472|C730041E01|C80550|C80741|D13Abb1e|Tm7sf1	G protein-coupled receptor 137B	protein-coding
unique_peak1-4770-8-1-2.00522241794757-2.05605744720049	chr3	122753167	122753631	+	0	NA	Intergenic	Intergenic	-15494	NM_021503	59006	Mm.141157	NM_021503	ENSMUSG00000028116	Myoz2	1110012I24Rik|Fatz-2|Myozl2	myozenin 2	protein-coding
common_peak2-23952-20-21-0.0286431659538957-0.306080386793804	chr16	14361329	14362161	+	0	NA	promoter-TSS (NM_008576)	promoter-TSS (NM_008576)	94	NM_008576	17250	Mm.196634	NM_008576	ENSMUSG00000023088	Abcc1	Abcc1a|Abcc1b|MRP|Mdrap|Mrp1	ATP-binding cassette, sub-family C (CFTR/MRP), member 1	protein-coding
unique_peak1-804-10-0-3.35641534500877-3.31132995230379	chr11	3398034	3398505	+	0	NA	intron (NM_172439, intron 9 of 12)	ID4_|SINE|ID	6555	NM_172439	170835	Mm.24313	NM_172439	ENSMUSG00000034570	Inpp5j	Pib5pa|Pipp	inositol polyphosphate 5-phosphatase J	protein-coding
common_peak2-30807-12-26--1.10611151707583-1.26025077975594	chr7	127691439	127691965	+	0	NA	Intergenic	Intergenic	-49437	NR_024324	78552	Mm.289190	NR_024324		E130201H02Rik	-	Y box protein 1 pseudogene	pseudo
common_peak2-20172-9-10--0.269818212233077-1.05503135781948	chr1	171270334	171270742	+	0	NA	Intergenic	L1Md_T|LINE|L1	191057	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
unique_peak1-4686-16-3-2.11826364226806-2.65002542325363	chr3	95855943	95856573	+	0	NA	intron (NM_013841, intron 3 of 14)	intron (NM_013841, intron 3 of 14)	6120	NM_013841	22365	Mm.263185	NM_013841	ENSMUSG00000015747	Vps45	AI462172|AW554165|mVps45	vacuolar protein sorting 45 (yeast)	protein-coding
common_peak1-9991-66-96--0.0814291777612866-0.319512006510297	chr13	51100636	51101769	+	0	NA	Intergenic	Intergenic	94894	NR_029463	77428	Mm.405630	NR_029463		9430083A17Rik	-	RIKEN cDNA 9430083A17 gene	ncRNA
common_peak1-8853-45-18-1.61243051190129-5.11120537129629	chr11	31802730	31804399	+	0	NA	intron (NM_001290678, intron 2 of 7)	intron (NM_001290678, intron 2 of 7)	32624	NM_026252	67579	Mm.339792	NM_026252	ENSMUSG00000020300	Cpeb4	Cpe-bp4|Cpeb-4|mCPEB-4	cytoplasmic polyadenylation element binding protein 4	protein-coding
common_peak1-9553-12-9-0.326847890200276-0.459837087125828	chr11	117204749	117205280	+	0	NA	intron (NM_001113488, intron 1 of 9)	(TCCA)n|Simple_repeat|Simple_repeat	11387	NM_001113488	53860	Mm.38450	NM_017380	ENSMUSG00000059248	Sept9	MSF1|Msf|PNUTL4|Sint1	septin 9	protein-coding
common_peak1-17936-12-6-0.841421063030034-1.58711810488664	chr7	127346454	127347002	+	0	NA	promoter-TSS (NM_026458)	promoter-TSS (NM_026458)	-750	NM_026458	67928	Mm.158178	NM_026458	ENSMUSG00000062017	Abca14	1700110B15Rik|4930539G24Rik	ATP-binding cassette, sub-family A (ABC1), member 14	protein-coding
unique_peak1-4155-10-5-0.771452844287613-1.33892459842472	chr2	101986699	101987148	+	0	NA	intron (NM_178886, intron 1 of 5)	L1MB8|LINE|L1	39694	NM_178886	241576	Mm.489740	NM_178886	ENSMUSG00000048058	Ldlrad3	6430500P08|AI194318|Lrad3	low density lipoprotein receptor class A domain containing 3	protein-coding
common_peak1-18523-138-164-0.429348610450574-2.20066012652741	chr8	92357783	92361167	+	0	NA	Intergenic	Intergenic	512676	NM_172913	244579	Mm.302755	NM_172913	ENSMUSG00000043668	Tox3	500-9|BC052044|C230068E13|CAGF9|Tnrc9	TOX high mobility group box family member 3	protein-coding
common_peak1-16729-32-32-0.234697899861207-0.451135909022752	chr6	30692861	30693958	+	0	NA	intron (NM_001252293, intron 6 of 11)	RSINE1|SINE|B4	2110	NR_029900	723930		NR_029900		Mir335	Mirn335|mir-335|mmu-mir-335	microRNA 335	ncRNA
unique_peak1-3351-31-7-2.22523867081312-5.17358211006552	chr19	21773730	21774470	+	0	NA	Intergenic	L1Md_F3|LINE|L1	46301	NM_146096	226016	Mm.28796	NM_146096	ENSMUSG00000047368	Abhd17b	5730446C15Rik|Cgi67|Fam108b|Fam108b1	abhydrolase domain containing 17B	protein-coding
common_peak2-23787-17-33--0.869166503045301-1.12969433525548	chr15	99584220	99585294	+	0	NA	intron (NM_028015, intron 1 of 9)	ID_B1|SINE|B4	18189	NM_028015	71949	Mm.390821	NM_028015		Cers5	2310081H14Rik|AU045339|AW544927|Lass5|Trh4	ceramide synthase 5	protein-coding
unique_peak2-38529-5-13--1.51173525806346-1.78669045979184	chr7	45759247	45759838	+	0	NA	Intergenic	Intergenic	760362	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak2-38635-8-20--1.38709500483119-1.45476480588849	chr7	82431820	82432392	+	0	NA	intron (NM_153579, intron 1 of 12)	intron (NM_153579, intron 1 of 12)	21166	NM_001109753	64176	Mm.273082	NM_153579	ENSMUSG00000053025	Sv2b	A830038F04Rik|AI850768|mKIAA0735	synaptic vesicle glycoprotein 2 b	protein-coding
unique_peak2-36123-5-20--2.09669775878461-2.39372960542229	chr2	5713807	5714673	+	0	NA	Intergenic	Intergenic	51766	NM_133837	98828	Mm.181490	NM_133837	ENSMUSG00000039128	Cdc123	AA959893|G431001I09Rik	cell division cycle 123	protein-coding
common_peak1-18727-11-11--0.0762689164695427-0.301029995663976	chr8	123330802	123331571	+	0	NA	Intergenic	Intergenic	70910	NM_008320	15900	Mm.334861	NM_008320	ENSMUSG00000041515	Irf8	AI893568|ICSBP|IRF-8|Icsbp1|Myls	interferon regulatory factor 8	protein-coding
common_peak2-31328-27-50--0.680879391076259-1.16605326768361	chr8	82773445	82774309	+	0	NA	Intergenic	L2b|LINE|L2	-191970	NM_020259	15245	Mm.254493	NM_020259		Hhip	Hhip1	Hedgehog-interacting protein	protein-coding
common_peak1-14694-16-12-0.417823924126969-0.489164546851866	chr3	67462986	67463807	+	0	NA	Intergenic	Intergenic	76706	NM_025813	66868	Mm.491153	NM_025813	ENSMUSG00000027775	Mfsd1	1200003O06Rik	major facilitator superfamily domain containing 1	protein-coding
common_peak2-20928-28-31-0.0529591198214625-0.314603908022751	chr11	6528007	6528860	+	0	NA	Intergenic	Intergenic	-2363	NM_134011	21379	Mm.247761	NM_134011	ENSMUSG00000000384	Tbrg4	2310042P22Rik|AA120735|AA408001|AI527316|Cpr2|R74877|Tb-12|mKIAA0948	transforming growth factor beta regulated gene 4	protein-coding
common_peak1-15033-7-7--0.200909169701811-0.97990265578305	chr3	121640485	121640986	+	0	NA	Intergenic	ORR1C1|LTR|MaLR	-15509	NM_172525	214137	Mm.229287	NM_172525	ENSMUSG00000039831	Arhgap29	6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1	Rho GTPase activating protein 29	protein-coding
common_peak1-17034-9-9--0.132314688483142-1.03275496310833	chr6	91737222	91737807	+	0	NA	intron (NM_001159507, intron 3 of 23)	intron (NM_001159507, intron 3 of 23)	19873	NM_001159507	243547	Mm.333264	NM_001033353	ENSMUSG00000030098	Grip2	-	glutamate receptor interacting protein 2	protein-coding
unique_peak2-34731-9-7-0.18961340640422-1.05908390183068	chr15	38391988	38392569	+	0	NA	Intergenic	IAPLTR2_Mm|LTR|ERVK	28024	NR_105916	102465574		NR_105916		Mir6951	mmu-mir-6951	microRNA mir-6951	ncRNA
common_peak2-28245-22-28--0.210696890040167-0.337923771396236	chr4	123802705	123803626	+	0	NA	Intergenic	MIRc|SINE|MIR	208489	NM_017475	54170	Mm.220922	NM_017475	ENSMUSG00000028646	Rragc	AU041672|Gtr2|RAGC|TIB929|YGR163W	Ras-related GTP binding C	protein-coding
common_peak1-16176-32-44--0.212761077110015-0.36647540798597	chr5	90890490	90891755	+	0	NA	intron (NM_009654, intron 2 of 14)	intron (NM_009654, intron 2 of 14)	1207	NM_009654	11657	Mm.16773	NM_009654	ENSMUSG00000029368	Alb	Alb-1|Alb1	albumin	protein-coding
unique_peak2-37826-8-15--0.994777582052429-0.771068449301683	chr5	130079391	130080054	+	0	NA	Intergenic	Intergenic	-10367	NM_011846	23948	Mm.42047	NM_011846	ENSMUSG00000029436	Mmp17	MT4-MMP|MT4MMP|MTMMP4	matrix metallopeptidase 17	protein-coding
common_peak1-17724-37-11-1.94103057076466-5.31705276927178	chr7	80058118	80059654	+	0	NA	Intergenic	Intergenic	188068	NR_046024	625243	Mm.261798	NR_046024		Gm6567	-	predicted gene 6567	ncRNA
unique_peak1-1707-8-0-3.00522241794757-2.70926996097583	chr13	92506560	92507098	+	0	NA	intron (NM_009027, intron 9 of 23)	intron (NM_009027, intron 9 of 23)	394620	NM_009027	19418	Mm.248630	NM_009027		Rasgrf2	6330417G04Rik|AW048350|Grf2|Ras-GRF2	RAS protein-specific guanine nucleotide-releasing factor 2	protein-coding
common_peak1-12815-109-122-0.443645176547961-1.82877220987787	chr18	67640556	67642056	+	0	NA	Intergenic	Intergenic	16803	NM_144867	225655	Mm.221420	NM_144867	ENSMUSG00000024530	Slmo1	A230074A19Rik|BC019561	slowmo homolog 1 (Drosophila)	protein-coding
unique_peak2-33447-4-5--0.608423014574403-0.909929411522249	chr11	62821674	62822042	+	0	NA	Intergenic	Intergenic	-53303	NM_027660	71062	Mm.23534	NM_027660	ENSMUSG00000042189	Tekt3	4933407G07Rik	tektin 3	protein-coding
common_peak1-19202-63-150--0.800092148254489-3.98164479980479	chr9	102717656	102718798	+	0	NA	Intergenic	Lx7|LINE|L1	-19023	NM_013649	20187	Mm.335391	NM_013649	ENSMUSG00000032547	Ryk	AW536699|ERK-3|Vik	receptor-like tyrosine kinase	protein-coding
common_peak1-18835-15-16--0.075298090694683-0.301029995663976	chr9	14500625	14501161	+	0	NA	Intergenic	Intergenic	44284	NM_177905	330890	Mm.334969	NM_177905	ENSMUSG00000036912	Piwil4	9230101H05Rik|Miwi2	piwi-like RNA-mediated gene silencing 4	protein-coding
unique_peak1-5413-8-4-0.683294323060208-1.21878474469819	chr5	109159548	109159963	+	0	NA	Intergenic	Intergenic	-33106	NR_040691	73295	Mm.416858	NR_040691		1700047L14Rik	-	RIKEN cDNA 1700047L14 gene	ncRNA
common_peak2-29243-15-14-0.105274154947137-0.330004445983672	chr5	139379150	139379629	+	0	NA	Intergenic	B4A|SINE|B4	83355	NM_001195128	384244	Mm.485002	NM_001195128	ENSMUSG00000094504	Gm5294	EG384244	predicted gene 5294	protein-coding
common_peak1-16721-30-22-0.64611345343486-1.04213512323541	chr6	29852630	29853694	+	0	NA	intron (NM_021414, intron 12 of 16)	intron (NM_021414, intron 12 of 16)	-13851	NM_001037740	320609	Mm.56097	NM_177204	ENSMUSG00000039629	Strip2	D330017J20Rik|Fam40b	striatin interacting protein 2	protein-coding
common_peak1-14045-12-17--0.521149016354673-0.417187467413082	chr2	119034776	119035461	+	0	NA	promoter-TSS (NM_139139)	promoter-TSS (NM_139139)	-587	NM_139139	69408	Mm.222241	NM_139139	ENSMUSG00000034278	Dnajc17	1700025B16Rik|C87112|D9Bwg1371e	DnaJ (Hsp40) homolog, subfamily C, member 17	protein-coding
common_peak1-10339-25-68--1.24667455143306-3.80422935433822	chr13	74808086	74808897	+	0	NA	intron (NM_030711, intron 12 of 18)	intron (NM_030711, intron 12 of 18)	31171	NM_030711	80898	Mm.83526	NM_030711	ENSMUSG00000021583	Erap1	Arts1|ERAAP|PILSA|PILSAP	endoplasmic reticulum aminopeptidase 1	protein-coding
common_peak1-11483-43-16-1.69510034427336-5.22068457343052	chr15	102150105	102151277	+	0	NA	intron (NM_001014976, intron 22 of 30)	intron (NM_001014976, intron 22 of 30)	-5856	NM_027044	56612	Mm.158264	NM_020031		Pfdn5	1190001O17Rik|1700010A06Rik|D15Ertd697e|Eig1|MM-1	prefoldin 5	protein-coding
common_peak1-7893-64-33-1.37798356045826-5.93406482790037	chr1	135021084	135023457	+	0	NA	Intergenic	(CAAA)n|Simple_repeat|Simple_repeat	-5473	NM_133819	108954	Mm.293628	NM_133819	ENSMUSG00000046062	Ppp1r15b	1810033K10Rik|AI606441|C530022L24Rik|CReP	protein phosphatase 1, regulatory (inhibitor) subunit 15b	protein-coding
common_peak1-10123-25-8-1.69192490390279-3.04993787975775	chr13	31578055	31578712	+	0	NA	Intergenic	Intergenic	-71656	NM_008239	15220	Mm.44235	NM_008239	ENSMUSG00000038415	Foxq1	HFH-1|Hfh1|Hfh1l|sa	forkhead box Q1	protein-coding
common_peak1-18407-40-41-0.266658259972337-0.537526587463064	chr8	72219356	72220563	+	0	NA	Intergenic	L1Md_F2|LINE|L1	20426	NM_181274	66869	Mm.334581	NM_181274		Zfp869	1200003I07Rik	zinc finger protein 869	protein-coding
common_peak2-31991-33-37-0.0834100490819436-0.326417267106726	chr9	70542529	70543708	+	0	NA	intron (NM_007399, intron 1 of 15)	intron (NM_007399, intron 1 of 15)	16310	NM_007399	11487	Mm.3037	NM_007399	ENSMUSG00000054693	Adam10	1700031C13Rik|MADM|kuz|kuzbanian	a disintegrin and metallopeptidase domain 10	protein-coding
common_peak1-16616-109-130-0.352736680349751-1.30455974218952	chr6	17693373	17695014	+	0	NA	intron (NM_001289629, intron 1 of 14)	intron (NM_001289629, intron 1 of 14)	601	NM_001289627	64213	Mm.12051	NM_022332	ENSMUSG00000029534	St7	9430001H04Rik|Fam4a2|HELG|RAY1|SEN4|TSG7	suppression of tumorigenicity 7	protein-coding
common_peak2-29151-26-21-0.468467473521165-0.647723624534446	chr5	129019282	129020136	+	0	NA	Intergenic	Intergenic	-80772	NM_172885	243274	Mm.447698	NM_172885	ENSMUSG00000034310	Tmem132d	C630028F04Rik	transmembrane protein 132D	protein-coding
common_peak2-23453-60-123--0.599904448766344-2.09370219286112	chr15	66577482	66578496	+	0	NA	intron (NM_009375, intron 34 of 47)	intron (NM_009375, intron 34 of 47)	75657	NM_009375	21819	Mm.441333	NM_009375	ENSMUSG00000053469	Tg	Tgn|cog	thyroglobulin	protein-coding
common_peak2-21538-8-16--1.08224042330277-0.891319708951328	chr11	95800093	95800670	+	0	NA	Intergenic	ORR1D2|LTR|MaLR	-24196	NM_008081	14422	Mm.340702	NM_008081		B4galnt2	AI593864|Dlb-1|Dlb1|Galg2|Galgt2|Ggm3|Igf2bp1	beta-1,4-N-acetyl-galactosaminyl transferase 2	protein-coding
unique_peak1-802-12-8-0.478850983645327-0.562038191119709	chr11	3348879	3349645	+	0	NA	intron (NM_145355, intron 1 of 7)	B1_Mur4|SINE|Alu	-3178	NR_028317	71523	Mm.72795	NM_027820	ENSMUSG00000034587	8430429K09Rik	-	RIKEN cDNA 8430429K09 gene	ncRNA
common_peak1-9410-24-13-0.985854980710112-1.52081014994907	chr11	101002208	101003206	+	0	NA	Intergenic	Intergenic	-14491	NM_134028	103768	Mm.142348	NM_134028	ENSMUSG00000045007	Tubg2	AI504772|Tubgl	tubulin, gamma 2	protein-coding
unique_peak1-3747-10-7-0.356415345008769-1.12966497611638	chr19	47834646	47835250	+	0	NA	intron (NM_027559, intron 27 of 37)	L1_Mus2|LINE|L1	28702	NM_026377	67788	Mm.181610	NM_026377	ENSMUSG00000025066	Sfr1	6330577E15Rik|Meir5	SWI5 dependent recombination repair 1	protein-coding
common_peak2-29815-17-7-1.21829633820504-1.55050753388977	chr6	91211274	91211698	+	0	NA	intron (NM_007992, intron 9 of 17)	intron (NM_007992, intron 9 of 17)	48728	NM_007992	14115	Mm.249146	NM_007992	ENSMUSG00000064080	Fbln2	5730577E14Rik|FIBL-2	fibulin 2	protein-coding
common_peak2-25400-11-10-0.0492619656143161-0.31137425193576	chr19	9059913	9060441	+	0	NA	Intergenic	B1F|SINE|Alu	-3597	NR_104460	66395	Mm.203866	NM_009643	ENSMUSG00000069833	Ahnak	DY6	AHNAK nucleoprotein (desmoyokin)	protein-coding
common_peak2-26562-42-84--0.667061608270518-1.72857853356109	chr2	102900338	102902163	+	0	NA	intron (NM_175094, intron 1 of 10)	intron (NM_175094, intron 1 of 10)	12420	NM_175094	27402	Mm.315011	NM_175094	ENSMUSG00000010914	Pdhx	AI481367|E3bp|Pdx1	pyruvate dehydrogenase complex, component X	protein-coding
common_peak2-29892-21-33--0.517973575984104-0.610902792227722	chr6	113166141	113167265	+	0	NA	Intergenic	B1_Mur2|SINE|Alu	-21134	NM_026849	97287	Mm.197816	NM_026849	ENSMUSG00000030269	Mtmr14	1110061O04Rik|AW553738|C76151	myotubularin related protein 14	protein-coding
unique_peak1-3569-13-3-1.77847203063777-2.58603100924543	chr19	28624016	28624712	+	0	NA	intron (NM_175459, intron 2 of 10)	intron (NM_175459, intron 2 of 10)	-128350	NR_045330	320176	Mm.406716	NR_045330	ENSMUSG00000097735	D930032P07Rik	-	RIKEN cDNA D930032P07 gene	ncRNA
common_peak2-31607-23-20-0.32945008173032-0.471456499375596	chr8	122566888	122567890	+	0	NA	intron (NM_030209, intron 14 of 14)	PB1D10|SINE|Alu	51019	NM_030209	78892	Mm.264680	NM_030209	ENSMUSG00000031825	Crispld2	1810049K24Rik|Lcrisp2|Lgl1|coffeecrisp	cysteine-rich secretory protein LCCL domain containing 2	protein-coding
unique_peak2-39926-6-11--1.01956439034085-1.32595962126035	chrX	104483043	104483829	+	0	NA	intron (NM_001177782, intron 1 of 2)	Lx9|LINE|L1	3751	NM_001177782	213439	Mm.383562	NM_001033251	ENSMUSG00000073008	Gpr174	Gm376|Lypsr3	G protein-coupled receptor 174	protein-coding
unique_peak2-39079-1-6--2.43441193227435-1.56314192529759	chr8	73177474	73177899	+	0	NA	intron (NM_023217, intron 2 of 4)	B3A|SINE|B2	5951	NM_023217	66522	Mm.154906	NM_023217	ENSMUSG00000056204	Pgpep1	2810003H13Rik|Gm19458|PAP-I|PGP|PGP-I|PGPI|Pcp	pyroglutamyl-peptidase I	protein-coding
unique_peak2-32907-12-21--0.810655633549659-0.713635438203849	chr10	20106090	20106810	+	0	NA	Intergenic	Intergenic	38825	NM_027930	71804	Mm.262151	NM_027930	ENSMUSG00000019992	Mtfr2	2610016C23Rik|4933412C16Rik|Dufd1|Fam54a	mitochondrial fission regulator 2	protein-coding
common_peak2-27919-11-16--0.578769256998726-0.503257505534083	chr4	11147072	11147862	+	0	NA	intron (NM_001159595, intron 17 of 26)	RSINE1|SINE|B4	28611	NM_001282943	12448	Mm.35867	NM_009830	ENSMUSG00000028212	Ccne2	-	cyclin E2	protein-coding
unique_peak1-3052-6-2-0.980435609659146-1.26211192963361	chr18	5978796	5979308	+	0	NA	Intergenic	Intergenic	157044	NM_029277	75415	Mm.239675	NM_029277	ENSMUSG00000041225	Arhgap12	2810011M08Rik	Rho GTPase activating protein 12	protein-coding
common_peak2-26729-9-11--0.395349094316936-0.344532117358383	chr2	131352427	131352849	+	0	NA	Intergenic	ORR1D2|LTR|MaLR	35040	NM_001177838	228608	Mm.136586	NM_145533	ENSMUSG00000027333	Smox	B130066H01Rik|PAO|PAOh1|SMO	spermine oxidase	protein-coding
common_peak2-21295-3-6--1.22133801201688-1.08602067057793	chr11	72440801	72441242	+	0	NA	intron (NM_025985, intron 1 of 5)	intron (NM_025985, intron 1 of 5)	20258	NM_025985	67128	Mm.458052	NM_025985	ENSMUSG00000020794	Ube2g1	2700059C12Rik|AI256795|AU014992|AW552068|D130023C12Rik	ubiquitin-conjugating enzyme E2G 1	protein-coding
common_peak2-21167-10-12--0.344024373132323-0.340565874754526	chr11	59191428	59191923	+	0	NA	Intergenic	L1MEg|LINE|L1	-2520	NM_001045521	216797	Mm.339586	NM_001045521	ENSMUSG00000049291	Prss38	Gm249|Mpn2	protease, serine 38	protein-coding
unique_peak1-599-13-6-0.971117108580164-1.01572999746118	chr10	19187985	19188574	+	0	NA	Intergenic	L1_Mus3|LINE|L1	111934	NM_053008	94222	Mm.156946	NM_053008	ENSMUSG00000045591	Olig3	Bhlhb7|bHLHe20	oligodendrocyte transcription factor 3	protein-coding
common_peak1-16305-13-6-0.971117108580164-1.01572999746118	chr5	114371513	114372112	+	0	NA	Intergenic	Intergenic	-13097	NM_011779	23790	Mm.260158	NM_011779	ENSMUSG00000004530	Coro1c	AL022675|AW455561|AW548837	coronin, actin binding protein 1C	protein-coding
common_peak2-24561-32-22-0.755530063162647-1.34355844763204	chr17	28930497	28931115	+	0	NA	Intergenic	Intergenic	-7265	NM_001081315	268936	Mm.291877	NM_199061	ENSMUSG00000063952	Brpf3	AI413466|AW493400|mKIAA1286	bromodomain and PHD finger containing, 3	protein-coding
unique_peak1-6859-9-7-0.18961340640422-1.05908390183068	chr8	86535853	86536376	+	0	NA	promoter-TSS (NR_035431)	promoter-TSS (NR_035431)	-495	NM_001291292	70134	Mm.41017	NM_001291292		2210011C24Rik	-	RIKEN cDNA 2210011C24 gene	protein-coding
common_peak2-31305-16-26--0.636623859895407-0.713114929964887	chr8	77133710	77134717	+	0	NA	Intergenic	(TAGA)n|Simple_repeat|Simple_repeat	-262860	NM_027837	71597	Mm.158735	NM_027837	ENSMUSG00000031621	Isx	9130012O13Rik|Pix-1	intestine specific homeobox	protein-coding
common_peak2-26441-32-23-0.694129518498504-1.20786488037717	chr2	69885093	69886185	+	0	NA	intron (NM_177376, intron 2 of 34)	intron (NM_177376, intron 2 of 34)	8456	NM_177376	329421	Mm.99648	NM_177376	ENSMUSG00000042064	Myo3b	A430065P19Rik	myosin IIIB	protein-coding
unique_peak2-35671-2-8--2.08737925770563-1.65811743852845	chr18	11645461	11645773	+	0	NA	Intergenic	Intergenic	-146168	NM_001252495	225182	Mm.154275	NM_175458	ENSMUSG00000041238	Rbbp8	9930104E21Rik|CtIP|RBBP-8|RIM|SAE2	retinoblastoma binding protein 8	protein-coding
common_peak2-26170-14-10-0.439784541720347-0.519648556297791	chr2	20526014	20526562	+	0	NA	intron (NM_001081006, intron 3 of 21)	L1Md_F2|LINE|L1	85148	NM_001177631	208618	Mm.237935	NM_029895	ENSMUSG00000036617	Etl4	6620402G01Rik|9430077C05Rik|BC026657|E330027G05Rik|Etl-4|Skt	enhancer trap locus 4	protein-coding
common_peak2-20451-4-8--1.19338551529556-1.21878474469819	chr10	40521169	40521564	+	0	NA	intron (NM_177793, intron 4 of 4)	L1_Mus1|LINE|L1	81583	NM_027879	71713	Mm.46063	NM_027879	ENSMUSG00000038446	Cdc40	1200003H23Rik|EHB3|PRP17	cell division cycle 40	protein-coding
common_peak2-19982-9-7-0.18961340640422-1.05908390183068	chr1	133693757	133694181	+	0	NA	promoter-TSS (NM_178079)	promoter-TSS (NM_178079)	-3	NM_178079	212933	Mm.23844	NM_178079	ENSMUSG00000042251	Pm20d1	4732466D17Rik|AI098026	peptidase M20 domain containing 1	protein-coding
unique_peak2-36877-4-6--0.830815435910851-0.989110657569874	chr3	94656973	94657220	+	0	NA	intron (NM_172683, intron 1 of 18)	intron (NM_172683, intron 1 of 18)	15607	NM_172683	229584	Mm.274787	NM_172683	ENSMUSG00000038902	Pogz	9530006B08Rik	pogo transposable element with ZNF domain	protein-coding
common_peak1-18194-62-72-0.220926899922067-0.535042315425563	chr8	22192708	22194334	+	0	NA	Intergenic	L1Md_F|LINE|L1	-1198	NM_001012307	497114	Mm.425522	NM_001012307	ENSMUSG00000074446	Defa23	Defcr23	defensin, alpha, 23	protein-coding
common_peak1-8840-65-93--0.0624229122005104-0.311709846559143	chr11	29172593	29173659	+	0	NA	Intergenic	MTB|LTR|MaLR	-25854	NM_025740	216618	Mm.128663	NM_025740	ENSMUSG00000020462	Ccdc104	2300003H10|4931428D14Rik	coiled-coil domain containing 104	protein-coding
unique_peak2-32593-4-8--1.19338551529556-1.21878474469819	chr1	90428400	90428812	+	0	NA	Intergenic	Intergenic	-19486	NR_037971	100503197	Mm.99352	NR_037971		Gm19589	-	predicted gene, 19589	ncRNA
common_peak2-30791-22-35--0.522640896354908-0.664636481544818	chr7	127232449	127233547	+	0	NA	Intergenic	MLT1F2|LTR|MaLR	-12942	NM_145586	233806	Mm.257952	NM_145586	ENSMUSG00000030917	Tmem159	8430420C20Rik	transmembrane protein 159	protein-coding
unique_peak2-39009-5-16--1.79184317725619-1.61682445937017	chr8	47874870	47875554	+	0	NA	intron (NM_008391, intron 1 of 8)	B1_Mur2|SINE|Alu	50113	NM_008391	16363	Mm.1149	NM_008391	ENSMUSG00000031627	Irf2	9830146E22Rik|AI646973|Irf-2	interferon regulatory factor 2	protein-coding
common_peak2-28932-89-121-0.104229417263116-0.387222165233646	chr5	96793426	96795979	+	0	NA	Intergenic	MIRc|SINE|MIR	-8272	NM_175473	231470	Mm.291120	NM_175473	ENSMUSG00000034687	Fras1	E130113P14Rik|bl|mKIAA1500	Fraser syndrome 1 homolog (human)	protein-coding
unique_peak1-6361-12-3-1.64877598508764-2.36932189928148	chr7	66377060	66377620	+	0	NA	Intergenic	RMER17C|LTR|ERVK	-106780	NM_173010	22215	Mm.9002	NM_011668	ENSMUSG00000025326	Ube3a	4732496B02|5830462N02Rik|A130086L21Rik|Hpve6a|mKIAA4216	ubiquitin protein ligase E3A	protein-coding
unique_peak2-36874-5-7--0.704380336005853-1.01466476204226	chr3	94597986	94598463	+	0	NA	Intergenic	Intergenic	-7787	NM_001037711	70737	Mm.87634	NM_001037711	ENSMUSG00000068876	Cgn	6330408J11Rik	cingulin	protein-coding
common_peak1-15121-12-16--0.4386868561627-0.368541233333383	chr3	138060473	138061117	+	0	NA	Intergenic	Lx|LINE|L1	-17666	NM_011996	26876	Mm.158750	NM_011996	ENSMUSG00000037797	Adh4	Adh2	alcohol dehydrogenase 4 (class II), pi polypeptide	protein-coding
common_peak1-12696-10-3-1.35641534500877-1.75805390616669	chr18	42054382	42054952	+	0	NA	intron (NM_029942, intron 5 of 6)	intron (NM_029942, intron 5 of 6)	56181	NM_029942	77619	Mm.30649	NM_029942	ENSMUSG00000056671	Prelid2	1700003A01Rik|C330008K14Rik	PRELI domain containing 2	protein-coding
unique_peak1-2111-12-2-2.06381348436648-2.79529063155376	chr15	41163879	41164398	+	0	NA	Intergenic	MIR|SINE|MIR	-114890	NM_001130166	170719	Mm.254267	NM_130885	ENSMUSG00000022307	Oxr1	2210416C20Rik|C7|C7B	oxidation resistance 1	protein-coding
unique_peak2-38570-7-5-0.214128329577033-1.01466476204226	chr7	66427536	66427926	+	0	NA	Intergenic	(TC)n|Simple_repeat|Simple_repeat	-56389	NM_173010	22215	Mm.9002	NM_011668	ENSMUSG00000025326	Ube3a	4732496B02|5830462N02Rik|A130086L21Rik|Hpve6a|mKIAA4216	ubiquitin protein ligase E3A	protein-coding
unique_peak1-6130-8-2-1.42025991722641-1.65811743852845	chr6	131433544	131434032	+	0	NA	Intergenic	PB1D10|SINE|Alu	-59992	NM_001244628	71392	Mm.22800	NM_001244628	ENSMUSG00000094113	5430401F13Rik	-	RIKEN cDNA 5430401F13 gene	protein-coding
unique_peak2-39515-8-18--1.24270509549601-1.15812782348128	chr9	64022241	64022972	+	0	NA	promoter-TSS (NR_028548)	promoter-TSS (NR_028548)	-633	NR_028548	100217453		NR_028548		Snord16a	MBII-98	small nucleolar RNA, C/D box 16A	snoRNA
common_peak1-16694-16-15-0.118263642268062-0.328191099940264	chr6	17306053	17306808	+	0	NA	Intergenic	Intergenic	48790	NM_001243064	12389	Mm.28278	NM_007616	ENSMUSG00000007655	Cav1	Cav|Cav-1	caveolin 1, caveolae protein	protein-coding
common_peak2-24747-9-6-0.382258484346616-1.11707584880836	chr17	50679366	50679807	+	0	NA	intron (NM_013880, intron 1 of 5)	intron (NM_013880, intron 1 of 5)	30714	NM_013880	224860	Mm.217362	NM_013880	ENSMUSG00000038910	Plcl2	PLC-L2|PRIP-2|Plce2|mKIAA1092	phospholipase C-like 2	protein-coding
common_peak1-18216-19-10-0.943255708024389-1.16735254179725	chr8	25011805	25012871	+	0	NA	intron (NM_001277239, intron 4 of 7)	intron (NM_001277239, intron 4 of 7)	232205	NM_177086	320158	Mm.121274	NM_177086	ENSMUSG00000037492	Zmat4	9630048M01Rik	zinc finger, matrin type 4	protein-coding
common_peak1-11398-34-18-1.13414101355768-2.44513000105557	chr15	98176457	98177647	+	0	NA	Intergenic	Intergenic	-5682	NM_146281	258278	Mm.377409	NM_146281	ENSMUSG00000051793	Olfr284	MOR160-4	olfactory receptor 284	protein-coding
unique_peak1-4348-7-0-2.79909083029819-2.40823996531185	chr2	155010990	155011494	+	0	NA	exon (NM_008395, exon 11 of 25)	exon (NM_008395, exon 11 of 25)	-51027	NR_111891	67068	Mm.23693	NM_025947	ENSMUSG00000047459	Dynlrb1	2010012N15Rik|2010320M17Rik|9430076K19Rik|AV124457|DNLC2A|Dncl2a|km23-1	dynein light chain roadblock-type 1	protein-coding
common_peak2-20033-12-13--0.158578936969966-0.301029995663979	chr1	136685582	136686147	+	0	NA	intron (NM_001081307, intron 18 of 23)	RMER1B|Other|Other	14434	NR_015606	329251	Mm.188709	NM_001081307	ENSMUSG00000073557	Ppp1r12b	1810037O03Rik|9530009M10Rik|AI132431|Mypt2	protein phosphatase 1, regulatory (inhibitor) subunit 12B	protein-coding
common_peak2-22599-19-24--0.241168863113038-0.344491671143527	chr13	73752511	73753956	+	0	NA	intron (NM_146047, intron 11 of 16)	intron (NM_146047, intron 11 of 16)	-11216	NM_009354	21752	Mm.10109	NM_009354	ENSMUSG00000021611	Tert	EST2|TCS1|TP2|TR|TRT	telomerase reverse transcriptase	protein-coding
unique_peak2-39953-3-18--2.66191060340286-2.88232357121378	chrX	140456621	140457416	+	0	NA	Intergenic	Intergenic	-89256	NM_001110224	13193	Mm.12871	NM_010025	ENSMUSG00000031285	Dcx	Dbct	doublecortin	protein-coding
common_peak1-19019-41-40-0.343596700230576-0.641883003087205	chr9	63377183	63378504	+	0	NA	intron (NM_030068, intron 9 of 21)	ID_B1|SINE|B4	72412	NM_030068	78250	Mm.444612	NM_030068	ENSMUSG00000037801	Iqch	4921504K03Rik	IQ motif containing H	protein-coding
unique_peak1-6695-9-3-1.18961340640422-1.57096726280955	chr8	33607684	33608335	+	0	NA	Intergenic	Intergenic	345642	NR_046039	666589	Mm.367675	NR_046039		Gm8179	EG666589	predicted gene 8179	ncRNA
unique_peak2-32979-3-6--1.22133801201688-1.08602067057793	chr10	59240922	59241320	+	0	NA	intron (NM_001291442, intron 7 of 12)	intron (NM_001291442, intron 7 of 12)	75810	NM_001291443	216001	Mm.27199	NM_144822	ENSMUSG00000020111	Micu1	C730016L05Rik|Calc|Cbara1	mitochondrial calcium uptake 1	protein-coding
common_peak2-19811-10-7-0.356415345008769-1.12966497611638	chr1	88436291	88436686	+	0	NA	Intergenic	B2_Mm2|SINE|B2	13177	NM_008972	19231	Mm.19187	NM_008972	ENSMUSG00000026238	Ptma	Thym	prothymosin alpha	protein-coding
common_peak1-18928-25-16-0.774387064094767-1.1282783422172	chr9	45060013	45061114	+	0	NA	Intergenic	Intergenic	14227	NR_106054	102466803		NR_106054		Mir7086	mmu-mir-7086	microRNA mir-7086	ncRNA
unique_peak2-34854-7-44--2.69276226603149-6.79508483902431	chr15	76565343	76566697	+	0	NA	intron (NM_198420, intron 5 of 10)	intron (NM_198420, intron 5 of 10)	-11745	NM_176828	223665	Mm.291713	NM_145472	ENSMUSG00000079002	C030006K11Rik	1110033I13Rik	RIKEN cDNA C030006K11 gene	protein-coding
unique_peak2-39721-1-8--2.79698201165906-2.05605744720049	chr9	120776141	120776517	+	0	NA	Intergenic	MIRc|SINE|MIR	48039	NR_040742	76402	Mm.436588	NR_040742		1700020M21Rik	-	RIKEN cDNA 1700020M21 gene	ncRNA
common_peak1-16623-47-65--0.109552694591906-0.328608881955056	chr6	128842690	128843953	+	0	NA	intron (NM_001289706, intron 3 of 6)	intron (NM_001289706, intron 3 of 6)	-2179	NM_001254947	232406	Mm.30745	NM_001254946	ENSMUSG00000090164	BC035044	-	cDNA sequence BC035044	protein-coding
unique_peak1-223-7-0-2.79909083029819-2.40823996531185	chr1	88514550	88515076	+	0	NA	Intergenic	MTD|LTR|MaLR	31138	NM_172974	26895	Mm.12973	NM_172974	ENSMUSG00000026240	Cops7b	D1Wsu66e|E130114M23	COP9 (constitutive photomorphogenic) homolog, subunit 7b (Arabidopsis thaliana)	protein-coding
unique_peak2-35700-8-6-0.197867495889966-1.03789460276074	chr18	25558268	25558670	+	0	NA	exon (NM_001033532, exon 9 of 11)	exon (NM_001033532, exon 9 of 11)	230948	NM_001033532	225289	Mm.391081	NM_001033532	ENSMUSG00000033632	AW554918	4921538P22|AI461742|Kiaa1328|mKIAA1328	expressed sequence AW554918	protein-coding
common_peak1-11150-23-16-0.634304663258741-0.82304638657543	chr15	74712307	74713497	+	0	NA	promoter-TSS (NM_025929)	promoter-TSS (NM_025929)	-768	NM_025929	67038	Mm.154566	NM_025929	ENSMUSG00000063522	2010109I03Rik	-	RIKEN cDNA 2010109I03 gene	protein-coding
common_peak2-24400-55-34-1.07533685420774-3.59593437431231	chr17	13920372	13921821	+	0	NA	intron (NM_010806, intron 1 of 32)	intron (NM_010806, intron 1 of 32)	-22695	NM_022311	21646	Mm.486358	NM_022311		Tcte2	AI429268|Tcte-2	t-complex-associated testis expressed 2	protein-coding
common_peak2-29255-87-84-0.586246169643467-2.29852270365789	chr5	140418342	140420003	+	0	NA	intron (NM_175522, intron 1 of 1)	intron (NM_175522, intron 1 of 1)	35275	NM_175522	243312	Mm.237102	NM_175522	ENSMUSG00000048988	Elfn1	A930017N06Rik|AI197272|Ppp1r28	leucine rich repeat and fibronectin type III, extracellular 1	protein-coding
common_peak1-18963-8-9--0.316705676939792-1.03275496310833	chr9	54642314	54642764	+	0	NA	Intergenic	Intergenic	29984	NM_013496	12903	Mm.34797	NM_013496	ENSMUSG00000032291	Crabp1	AI326249|CRABP-I|Crabp-1|CrabpI|Rbp-5	cellular retinoic acid binding protein I	protein-coding
common_peak1-15894-56-109--0.545763888085417-1.67315279398724	chr5	15934015	15935485	+	0	NA	Intergenic	Intergenic	-124563	NM_001289460	15234	Mm.267078	NM_010427	ENSMUSG00000028864	Hgf	C230052L06Rik|HGF/SF|NK1|NK2|SF|SF/HGF	hepatocyte growth factor	protein-coding
common_peak1-9186-41-36-0.49169533921971-0.936258361511365	chr11	79071000	79072586	+	0	NA	Intergenic	B1F|SINE|Alu	-3596	NM_019653	78889	Mm.307022	NM_019653	ENSMUSG00000017677	Wsb1	1110056B13Rik|2700038M07Rik	WD repeat and SOCS box-containing 1	protein-coding
unique_peak2-34025-6-4-0.24347001549294-0.989110657569874	chr12	108765659	108766014	+	0	NA	Intergenic	L1MC|LINE|L1	207862	NR_045973	74968	Mm.359821	NR_045973	ENSMUSG00000085641	4930465M20Rik	4930431H15Rik	RIKEN cDNA 4930465M20 gene	ncRNA
unique_peak1-6209-15-2-2.4272022498345-3.53487848679804	chr7	60243383	60244059	+	0	NA	Intergenic	RMER15|LTR|ERVL	903538	NR_105746	102466619		NR_105746	miRBase:MI0021585	Mir6238	mmu-mir-6238	microRNA mir-6238	ncRNA
common_peak2-23192-27-30-0.0373496405083609-0.315041925765932	chr15	79658647	79659450	+	0	NA	exon (NM_028763, exon 5 of 5)	exon (NM_028763, exon 5 of 5)	5715	NM_001013360	504193	Mm.38438	NM_029079	ENSMUSG00000022421	Npcd	Cbx6-Nptxr	neuronal pentraxin chromo domain	protein-coding
common_peak1-13967-68-105--0.157959675264903-0.409648900448003	chr2	92741845	92743726	+	0	NA	Intergenic	(TAGA)n|Simple_repeat|Simple_repeat	-12473	NM_030725	80976	Mm.33490	NM_030725	ENSMUSG00000027220	Syt13	5730409J20Rik|AI549909|mKIAA1427	synaptotagmin XIII	protein-coding
common_peak2-21460-11-14--0.398197011356905-0.379391706698377	chr11	87073888	87074679	+	0	NA	intron (NM_177167, intron 1 of 6)	intron (NM_177167, intron 1 of 6)	98213	NM_177167	320472	Mm.341988	NM_177167	ENSMUSG00000046442	Ppm1e	AW049266|B930008A12Rik|POPX1|PP2CH|mKIAA1072	protein phosphatase 1E (PP2C domain containing)	protein-coding
unique_peak2-38181-5-6--0.511735258063458-0.947717972411649	chr6	94230330	94230628	+	0	NA	intron (NM_001286784, intron 1 of 22)	intron (NM_001286784, intron 1 of 22)	3432	NM_001286786	14924	Mm.217216	NM_010367	ENSMUSG00000045095	Magi1	AIP3|BAP1|Baiap1|Gukmi1|MAGI1c|Magi-1|TNRC19|WWP3|mKIAA4129	membrane associated guanylate kinase, WW and PDZ domain containing 1	protein-coding
common_peak2-21522-14-18--0.348711353085941-0.360333814299795	chr11	94601343	94602050	+	0	NA	Intergenic	RLTR14-int|LTR|ERV1	20800	NM_001105561	217122	Mm.24063	NM_183153		Gm11545	A430060F13Rik|C86086|OTTMUSG00000002043	predicted gene 11545	protein-coding
unique_peak1-4564-13-8-0.608547029195456-0.660903317613904	chr3	52071585	52072337	+	0	NA	promoter-TSS (NM_019739)	promoter-TSS (NM_019739)	-298	NM_019739	56458	Mm.29891	NM_019739	ENSMUSG00000044167	Foxo1	AI876417|Afxh|FKHR|Fkhr1|Foxo1a	forkhead box O1	protein-coding
unique_peak2-36492-6-6--0.241956811677302-0.947717972411649	chr2	153444970	153445400	+	0	NA	exon (NM_001195390, exon 10 of 10)	exon (NM_001195390, exon 10 of 10)	13332	NM_001195390	99311	Mm.294478	NM_133850	ENSMUSG00000056941	Commd7	2310010I22Rik|AW060956|mU3	COMM domain containing 7	protein-coding
common_peak1-9283-19-10-0.943255708024389-1.16735254179725	chr11	88180942	88181747	+	0	NA	intron (NM_054043, intron 10 of 13)	intron (NM_054043, intron 10 of 13)	15069	NR_039545	100628571		NR_039545	miRBase:MI0016973	Mir378b	mmu-mir-378b	microRNA 378b	ncRNA
unique_peak1-6433-11-6-0.701338662194009-1.32595962126035	chr7	97740655	97741383	+	0	NA	Intergenic	MLT1A0|LTR|MaLR	-116514	NM_026734	68472	Mm.289791	NM_026734		Tmem126b	1110001A23Rik	transmembrane protein 126B	protein-coding
common_peak1-16982-27-19-0.669617856007873-1.02859851787301	chr6	87101339	87102441	+	0	NA	intron (NM_054041, intron 17 of 17)	intron (NM_054041, intron 17 of 17)	47150	NM_001167937	52372	Mm.282851	NM_001167937		D6Ertd527e	AU043841	DNA segment, Chr 6, ERATO Doi 527, expressed	protein-coding
common_peak2-25885-12-9-0.326847890200276-0.459837087125828	chr19	44314259	44314691	+	0	NA	intron (NM_024450, intron 5 of 5)	B2_Mm1a|SINE|B2	36697	NM_024450	30049	Mm.480594	NM_024450	ENSMUSG00000025202	Scd3	4930513N16Rik	stearoyl-coenzyme A desaturase 3	protein-coding
unique_peak2-35466-5-9--1.02630843089322-1.21398586181642	chr17	43095805	43096368	+	0	NA	Intergenic	Intergenic	-57418	NM_178589	94185	Mm.200792	NM_178589	ENSMUSG00000023915	Tnfrsf21	AA959878|DR6|R74815|TR7	tumor necrosis factor receptor superfamily, member 21	protein-coding
unique_peak2-34688-0-8--4.01005593191652-2.05605744720049	chr15	25377244	25377725	+	0	NA	intron (NR_027376, intron 1 of 1)	CT-rich|Low_complexity|Low_complexity	33537	NR_027376	432939	Mm.146555	NM_001013791		Gm5468	100040583|EG432939	predicted gene 5468	ncRNA
common_peak1-11171-21-20-0.177171842487475-0.380101753845079	chr15	76294349	76295326	+	0	NA	intron (NM_013481, intron 3 of 15)	intron (NM_013481, intron 3 of 15)	6969	NM_198885	20289	Mm.322821	NM_198885	ENSMUSG00000034161	Scx	BB114693|Bhlha41|Scl	scleraxis	protein-coding
common_peak1-15044-38-88--0.904280771667867-2.89387241085889	chr3	122245341	122246498	+	0	NA	intron (NM_001114665, intron 15 of 15)	RSINE1|SINE|B4	-1320	NR_106117	102465764		NR_106117		Mir7657	mmu-mir-7657	microRNA mir-7657	ncRNA
common_peak2-22046-12-11-0.0638134843664826-0.337263207250336	chr12	69461888	69462312	+	0	NA	Intergenic	Intergenic	-691842	NR_033146	100316870	Mm.379794	NR_033146		Gm17821	-	DDB1 and CUL4 associated factor 5 pseudogene	pseudo
common_peak1-17515-21-37--0.67843824817735-0.907273387067392	chr7	27591649	27592414	+	0	NA	Intergenic	(TTTC)n|Simple_repeat|Simple_repeat	-1915	NM_013809	13108	Mm.102312	NM_013809	ENSMUSG00000049685	Cyp2g1	-	cytochrome P450, family 2, subfamily g, polypeptide 1	protein-coding
unique_peak1-4179-10-3-1.35641534500877-1.75805390616669	chr2	113636025	113636579	+	0	NA	intron (NM_009162, intron 2 of 5)	RLTRETN_Mm|LTR|ERVK	32946	NM_009162	20394	Mm.4836	NM_009162	ENSMUSG00000023236	Scg5	7B2|AI325031|Sgne-1|Sgne1	secretogranin V	protein-coding
common_peak2-31639-8-11--0.579740082773585-1.14218153353838	chr8	123753421	123753949	+	0	NA	Intergenic	Intergenic	102100	NM_008024	14241	Mm.5111	NM_008024	ENSMUSG00000097084	Foxl1	FREAC7|Fkh6|fkh-6	forkhead box L1	protein-coding
common_peak1-17785-9-5-0.604650905683064-1.21398586181642	chr7	98170262	98170835	+	0	NA	Intergenic	Intergenic	-68748	NM_011807	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
common_peak1-13597-75-110--0.0553488746068211-0.310036389339139	chr2	18063884	18065368	+	0	NA	intron (NR_045538, intron 8 of 22)	intron (NR_045538, intron 8 of 22)	78414	NM_001252561	17354	Mm.209175	NM_010804	ENSMUSG00000026743	Mllt10	Af10|B130021D15Rik|D630001B22Rik|mKIAA4140	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	protein-coding
unique_peak2-35451-7-6--0.00826409175941478-0.97990265578305	chr17	35837505	35837884	+	0	NA	promoter-TSS (NM_001198833)	promoter-TSS (NM_001198833)	-159	NM_001198833	12305	Mm.5021	NM_007584	ENSMUSG00000003534	Ddr1	6030432F18|AI323681|CD167a|Cak|Nep|PTK3A	discoidin domain receptor family, member 1	protein-coding
common_peak2-30400-35-42-0.00510550376040619-0.30358472802154	chr7	34312866	34313826	+	0	NA	Intergenic	Intergenic	124954	NR_045685	353109	Mm.63867	NR_045685		Scgb2b23-ps	1700028O08Rik|Abpbg23-ps|C2y|Scgb2b1|Scgb2b1-ps	secretoglobin, family 2B, member 23, pseudogene	pseudo
unique_peak2-37356-2-6--1.72480917832092-1.26211192963361	chr4	134514038	134514412	+	0	NA	Intergenic	B3|SINE|B2	27330	NM_026780	68592	Mm.29989	NM_026780	ENSMUSG00000028821	Syf2	1110018L13Rik|Cbpin|D4Bwg1551e|Gcipip|Ntc31|mp29|p29	SYF2 homolog, RNA splicing factor (S. cerevisiae)	protein-coding
unique_peak2-35838-1-14--3.53394760582526-3.64038867156802	chr18	68829245	68829779	+	0	NA	Intergenic	Intergenic	-69542	NR_105774	102465183		NR_105774	miRBase:MI0021884	Mir6356	mmu-mir-6356	microRNA mir-6356	ncRNA
common_peak1-15487-11-20--0.883623838527147-0.876666802405043	chr4	109000731	109001365	+	0	NA	intron (NM_007943, intron 11 of 24)	B2_Mm2|SINE|B2	-14613	NM_001159964	13858	Mm.318250	NM_007943	ENSMUSG00000028552	Eps15	2410112D09Rik	epidermal growth factor receptor pathway substrate 15	protein-coding
common_peak1-18432-69-117--0.287500602103109-0.707505619155811	chr8	79028976	79030944	+	0	NA	Intergenic	RLTR17|LTR|ERVK	394112	NR_028579	100039211	Mm.367571	NR_028579	ENSMUSG00000074235	Gm10649	ENSMUSG00000074235	predicted gene 10649	ncRNA
unique_peak2-32814-3-6--1.22133801201688-1.08602067057793	chr1	184752352	184752784	+	0	NA	intron (NM_144796, intron 1 of 7)	ORR1E|LTR|MaLR	57531	NM_144796	96935	Mm.331052	NM_144796	ENSMUSG00000038576	Susd4	AI848994|E430021N18Rik|N28096	sushi domain containing 4	protein-coding
common_peak1-12387-69-126--0.393542239513433-1.12228147763065	chr17	69382980	69384475	+	0	NA	Intergenic	B4|SINE|B4	-122423	NM_013813	13823	Mm.131135	NM_013813	ENSMUSG00000024044	Epb4.1l3	4.1B|DAL1P|Dal1|Epb41l3|NBL3	erythrocyte protein band 4.1-like 3	protein-coding
common_peak1-18231-21-11-0.984526764545079-1.3750876294627	chr8	26794193	26795117	+	0	NA	intron (NM_001081269, intron 13 of 22)	ORR1D1|LTR|MaLR	-35865	NR_121642	71910	Mm.385055	NM_028000	ENSMUSG00000031570	Ppapdc1b	1810019D05Rik|2310022A04Rik|AW045471|Ppapdc1	phosphatidic acid phosphatase type 2 domain containing 1B	protein-coding
unique_peak2-34558-7-7--0.200909169701811-0.97990265578305	chr14	64797606	64798192	+	0	NA	intron (NM_001253715, intron 4 of 4)	L1M7|LINE|L1	74739	NM_028525	73382	Mm.481055	NM_028525	ENSMUSG00000021966	Prss52	1700049K14Rik|Tesp3	protease, serine 52	protein-coding
common_peak1-13618-7-11--0.785871670422967-1.21681515183528	chr2	24563214	24563698	+	0	NA	intron (NM_001042528, intron 10 of 46)	intron (NM_001042528, intron 10 of 46)	55216	NM_001042528	12287	Mm.4424	NM_007579	ENSMUSG00000004113	Cacna1b	AW050276|AW060892|AW822256|Cav2.2|Cchn1a|alpha(1B)	calcium channel, voltage-dependent, N type, alpha 1B subunit	protein-coding
unique_peak1-3912-11-3-1.50869358425161-1.95434855131066	chr2	24367383	24367939	+	0	NA	Intergenic	MamRep1161|DNA|TcMar	-36542	NM_011040	18510	Mm.2533	NM_011040	ENSMUSG00000026976	Pax8	Pax-8	paired box 8	protein-coding
unique_peak2-36628-1-9--2.94898510510411-2.31132995230379	chr3	3507551	3507984	+	0	NA	promoter-TSS (NM_013920)	promoter-TSS (NM_013920)	-263	NM_013920	30942	Mm.330897	NM_013920	ENSMUSG00000017688	Hnf4g	NR2A2	hepatocyte nuclear factor 4, gamma	protein-coding
unique_peak1-6577-16-1-3.11826364226806-4.46429741251234	chr7	141276469	141277109	+	0	NA	intron (NM_007400, intron 3 of 22)	Lx8|LINE|L1	139991	NM_007400	11489	Mm.439714	NM_007400	ENSMUSG00000054555	Adam12	Mltna|mKIAA4001	a disintegrin and metallopeptidase domain 12 (meltrin alpha)	protein-coding
common_peak1-12653-54-84--0.236305174507968-0.501671748198386	chr18	36286170	36288410	+	0	NA	intron (NM_001167891, intron 1 of 9)	intron (NM_001167891, intron 1 of 9)	21433	NR_015571	74966	Mm.379238	NM_030089		4930471G03Rik	1700007N01Rik	RIKEN cDNA 4930471G03 gene	ncRNA
unique_peak1-3900-9-3-1.18961340640422-1.57096726280955	chr2	20936498	20937043	+	0	NA	Intergenic	Intergenic	46269	NR_033225	433408	Mm.386941	NR_033225		Gm13375	OTTMUSG00000011664	predicted gene 13375	ncRNA
unique_peak2-35796-2-10--2.37688587490062-2.09384600808989	chr18	57880123	57880509	+	0	NA	intron (NM_029290, intron 6 of 6)	intron (NM_029290, intron 6 of 6)	-82077	NR_045360	70157	Mm.490532	NR_045360		2210409D07Rik	-	RIKEN cDNA 2210409D07 gene	ncRNA
unique_peak1-4482-9-5-0.604650905683064-1.21398586181642	chr3	65109505	65110017	+	0	NA	intron (NM_001289450, intron 8 of 14)	Lx8|LINE|L1	43590	NR_040390	319798	Mm.445698	NR_040390		A730090N16Rik	-	RIKEN cDNA A730090N16 gene	ncRNA
common_peak1-11996-94-73-0.920136202220366-4.95605732338743	chr17	13307779	13310248	+	0	NA	intron (NM_199252, intron 8 of 9)	intron (NM_199252, intron 8 of 9)	15644	NM_199252	381058	Mm.390935	NM_199252	ENSMUSG00000067049	Unc93a	Unc93l|unc-93A	unc-93 homolog A (C. elegans)	protein-coding
common_peak1-19031-49-58-0.123640773663342-0.365132085969548	chr9	64123910	64125755	+	0	NA	Intergenic	ID4_|SINE|ID	-4582	NM_025372	66131	Mm.196219	NM_025372	ENSMUSG00000032397	Tipin	1110005A05Rik|1110018P21Rik	timeless interacting protein	protein-coding
common_peak1-8308-7-24--1.84476535947653-2.44150343356329	chr10	40300858	40301385	+	0	NA	exon (NM_027572, exon 3 of 8)	exon (NM_027572, exon 3 of 8)	10953	NM_027572	70840	Mm.332570	NM_027572	ENSMUSG00000019834	Slc22a16	4921504E14Rik|CT2|FLIPT2|OCT6|OKB1	solute carrier family 22 (organic cation transporter), member 16	protein-coding
common_peak2-25626-22-19-0.325356010200042-0.479250674391597	chr19	9073386	9073896	+	0	NA	intron (NR_104460, intron 1 of 6)	intron (NR_104460, intron 1 of 6)	9867	NM_001286518	66395	Mm.203866	NM_009643	ENSMUSG00000069833	Ahnak	DY6	AHNAK nucleoprotein (desmoyokin)	protein-coding
unique_peak2-36276-4-5--0.608423014574403-0.909929411522249	chr2	60812118	60812420	+	0	NA	intron (NR_045335, intron 1 of 3)	intron (NR_045335, intron 1 of 3)	939	NR_045335	100038493	Mm.388076	NR_045335	ENSMUSG00000075325	Gm13582	ENSMUSG00000075325|OTTMUSG00000012844	predicted gene 13582	ncRNA
unique_peak2-38028-6-11--1.01956439034085-1.32595962126035	chr6	37723495	37723959	+	0	NA	Intergenic	MurERV4-int|LTR|ERVK	-97084	NM_001272064	21848	Mm.41063	NM_145076		Trim24	A130082H20Rik|AI447469|D430004I05Rik|TIF1|TIF1-alpha|TIF1alpha|Tif1a	tripartite motif-containing 24	protein-coding
common_peak2-29900-14-15--0.100783839642355-0.301029995663982	chr6	113604786	113605371	+	0	NA	intron (NM_001113553, intron 2 of 11)	intron (NM_001113553, intron 2 of 11)	16617	NM_001113553	108960	Mm.152142	NM_172161	ENSMUSG00000060477	Irak2	6330415L08Rik|AI649099|IRAK-2	interleukin-1 receptor-associated kinase 2	protein-coding
common_peak2-29239-15-14-0.105274154947137-0.330004445983672	chr5	139200438	139201071	+	0	NA	Intergenic	Intergenic	-30281	NM_030565	80752	Mm.320355	NM_030565	ENSMUSG00000025854	Fam20c	C76981|DMP-4|DMP4|GEF-CK|mKIAA4081	family with sequence similarity 20, member C	protein-coding
unique_peak2-38283-6-7--0.434601889619698-0.97990265578305	chr6	134186446	134186862	+	0	NA	intron (NM_007961, intron 4 of 7)	intron (NM_007961, intron 4 of 7)	-159693	NM_025778	66813	Mm.474472	NM_025778	ENSMUSG00000030200	Bcl2l14	4930452K23Rik|4933405K19Rik|9030625M01Rik|AI429211|Bclg	BCL2-like 14 (apoptosis facilitator)	protein-coding
unique_peak2-36687-0-58--6.72277397983605-15.8603546796027	chr3	34650131	34651813	+	0	NA	Intergenic	Intergenic	-20025	NR_110488	102638436	Mm.261793	NR_110488		Peril	-	Peril transcript	ncRNA
common_peak2-24882-16-17--0.0516613591742505-0.301029995663984	chr17	83538507	83539347	+	0	NA	Intergenic	Intergenic	-61362	NR_045094	100503434	Mm.187281	NR_045094		Gm19689	-	predicted gene, 19689	ncRNA
common_peak1-14515-60-54-0.572932148095871-1.56181679352091	chr3	27154053	27155911	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-61017	NM_009425	22035	Mm.1062	NM_009425	ENSMUSG00000039304	Tnfsf10	A330042I21Rik|AI448571|APO-2L|Ly81|TL2|Trail	tumor necrosis factor (ligand) superfamily, member 10	protein-coding
common_peak2-28082-4-10--1.48289213249054-1.5150158574804	chr4	83307812	83308340	+	0	NA	intron (NM_001081012, intron 15 of 25)	intron (NM_001081012, intron 15 of 25)	136627	NM_001081012	320226	Mm.180032	NM_029117	ENSMUSG00000052407	Ccdc171	4930418J05Rik|4930473A06Rik|A330015D16Rik	coiled-coil domain containing 171	protein-coding
unique_peak1-6844-9-3-1.18961340640422-1.57096726280955	chr8	84125140	84125664	+	0	NA	intron (NM_001297596, intron 2 of 24)	intron (NM_001297596, intron 2 of 24)	258941	NM_001297593	234515	Mm.324468	NM_001024617	ENSMUSG00000037940	Inpp4b	E130107I17Rik	inositol polyphosphate-4-phosphatase, type II	protein-coding
common_peak1-16904-12-14--0.25811461052088-0.309074325783021	chr6	72379166	72379869	+	0	NA	exon (NM_019802, exon 14 of 15)	exon (NM_019802, exon 14 of 15)	-9160	NR_046011	78108	Mm.440743	NR_046011		4930414L22Rik	AI449819	RIKEN cDNA 4930414L22 gene	ncRNA
common_peak2-25557-30-30-0.215479099104998-0.419637632935632	chr19	6297311	6298561	+	0	NA	intron (NM_010119, intron 4 of 4)	intron (NM_010119, intron 4 of 4)	-8521	NM_001033342	240505	Mm.329622	NM_001033342	ENSMUSG00000024769	Cdc42bpg	BC046418|MRCKgamma	CDC42 binding protein kinase gamma (DMPK-like)	protein-coding
unique_peak2-39698-4-5--0.608423014574403-0.909929411522249	chr9	111146161	111146505	+	0	NA	intron (NM_026810, intron 11 of 18)	RLTR25B|LTR|ERVK	27779	NM_026810	17350	Mm.486383	NM_026810	ENSMUSG00000032498	Mlh1	1110035C23Rik|AI317206|AI325952|AI561766	mutL homolog 1 (E. coli)	protein-coding
unique_peak2-34351-2-12--2.61789397440441-2.55640854263862	chr13	100593433	100593982	+	0	NA	Intergenic	Intergenic	76931	NM_013732	27220	Mm.75498	NM_013732	ENSMUSG00000021647	Cartpt	Cart	CART prepropeptide	protein-coding
common_peak2-19789-15-7-1.01216475055566-1.08658567012551	chr1	86437777	86438289	+	0	NA	Intergenic	Intergenic	1057352	NM_030194	109032	Mm.335802	NM_030194	ENSMUSG00000070034	Sp110	5031415C07Rik|52kDa|5830484A20Rik|ENSMUSG00000075603|Ifi75|Ipr1	Sp110 nuclear body protein	protein-coding
common_peak1-14763-28-39--0.2689689750659-0.409729630423047	chr3	88335915	88337039	+	0	NA	exon (NM_001029890, exon 1 of 2)	exon (NM_001029890, exon 1 of 2)	160	NM_001029890	72640	Mm.275154	NM_001029890	ENSMUSG00000074480	Mex3a	2700083E18Rik|Gm411|Rkhd4	mex3 homolog A (C. elegans)	protein-coding
unique_peak1-5963-11-2-1.92373108353046-2.32232533660526	chr6	93291755	93292266	+	0	NA	Intergenic	MTEa|LTR|MaLR	401434	NR_015530	330385	Mm.483472	NR_015530	ENSMUSG00000097462	9530026P05Rik	B430306B02	RIKEN cDNA 9530026P05 gene	ncRNA
unique_peak2-33402-6-14--1.34149248522822-1.01572999746118	chr11	53891254	53891762	+	0	NA	Intergenic	ORR1B1-int|LTR|MaLR	-8989	NM_019417	30794	Mm.21830	NM_019417	ENSMUSG00000020388	Pdlim4	Ril	PDZ and LIM domain 4	protein-coding
unique_peak2-35418-3-6--1.22133801201688-1.08602067057793	chr17	33956299	33956579	+	0	NA	intron (NM_030697, intron 6 of 10)	intron (NM_030697, intron 6 of 10)	5004	NM_016844	54127	Mm.352374	NM_016844	ENSMUSG00000067288	Rps28	-	ribosomal protein S28	protein-coding
common_peak2-27677-99-129-0.196989930254197-0.613742147057493	chr3	116661429	116662873	+	0	NA	intron (NM_023245, intron 1 of 7)	intron (NM_023245, intron 1 of 7)	-9034	NR_040596	74654	Mm.410820	NR_040596	ENSMUSG00000080907	4930455H04Rik	-	RIKEN cDNA 4930455H04 gene	ncRNA
common_peak1-12868-6-7--0.434601889619698-0.97990265578305	chr18	76057363	76057809	+	0	NA	intron (NM_145356, intron 1 of 4)	intron (NM_145356, intron 1 of 4)	77754	NM_145356	207259	Mm.159332	NM_145356	ENSMUSG00000044646	Zbtb7c	B230208J24Rik|Kr-pok|Zbtb36	zinc finger and BTB domain containing 7C	protein-coding
common_peak2-21683-24-16-0.705747061517378-1.02077663956384	chr11	104288620	104289467	+	0	NA	intron (NM_001081045, intron 1 of 13)	B3|SINE|B2	14562	NM_001081045	76719	Mm.136418	NM_001081045	ENSMUSG00000018412	Kansl1	1700081L11Rik|9430041J06Rik|mKIAA1267	KAT8 regulatory NSL complex subunit 1	protein-coding
unique_peak2-35488-7-6--0.00826409175941478-0.97990265578305	chr17	45772758	45773117	+	0	NA	intron (NM_001013767, intron 11 of 21)	intron (NM_001013767, intron 11 of 21)	23321	NM_001013767	268958	Mm.426026	NM_001013767	ENSMUSG00000058626	Capn11	-	calpain 11	protein-coding
common_peak2-25011-64-87-0.00601478307130598-0.302270843793768	chr18	16807736	16809901	+	0	NA	exon (NM_007664, exon 3 of 16)	exon (NM_007664, exon 3 of 16)	158740	NM_007664	12558	Mm.257437	NM_007664	ENSMUSG00000024304	Cdh2	CDHN|N-cadherin|Ncad	cadherin 2	protein-coding
common_peak1-19206-18-17-0.142994149786039-0.353907621462753	chr9	103008012	103008995	+	0	NA	Intergenic	ORR1D2|LTR|MaLR	-5901	NM_173781	270192	Mm.490252	NM_173781	ENSMUSG00000032549	Rab6b	9630015C03|AI844641|C330006L04Rik|D9Bwg0185e	RAB6B, member RAS oncogene family	protein-coding
common_peak1-18287-12-24--0.995080204687086-1.0220094258199	chr8	41416422	41417083	+	0	NA	intron (NM_030110, intron 1 of 14)	intron (NM_030110, intron 1 of 14)	23347	NM_030110	78506	Mm.169893	NM_030110		Micu3	2900075B16Rik|Efha2	mitochondrial calcium uptake family, member 3	protein-coding
common_peak2-30498-65-134--0.584649657573704-2.19006174796672	chr7	63937807	63939116	+	0	NA	Intergenic	L1Md_T|LINE|L1	443320	NM_021879	18431	Mm.137052	NM_021879	ENSMUSG00000030450	Oca2	D7H15S12|D7Icr28RN|D7Nic1|p	oculocutaneous albinism II	protein-coding
common_peak1-9858-20-62--1.48920513890872-4.60967332922062	chr12	80259157	80260357	+	0	NA	intron (NM_016800, intron 4 of 5)	B1_Mus1|SINE|Alu	13688	NM_016800	53612	Mm.265929	NM_016800	ENSMUSG00000021124	Vti1b	AU015348|GES30|MVti1b|SNARE|Vti1-rp1	vesicle transport through interaction with t-SNAREs 1B	protein-coding
common_peak1-14733-19-59--1.50420326894683-4.38310456572582	chr3	85886508	85887555	+	0	NA	Intergenic	Intergenic	-1325	NM_001082414	27059	Mm.2454	NM_012059	ENSMUSG00000028082	Sh3d19	AW011754|Kryn	SH3 domain protein D19	protein-coding
common_peak1-19072-7-19--1.52283726458917-1.55050753388976	chr9	70208102	70208567	+	0	NA	intron (NM_181072, intron 18 of 27)	B1_Mur3|SINE|Alu	45226	NR_049200	100885839		NR_049200	miRBase:MI0019195	Mir5626	mmu-mir-5626	microRNA mir-5626	ncRNA
common_peak1-17834-40-62--0.318304240748819-0.533919121953929	chr7	109959593	109961063	+	0	NA	Intergenic	(GA)n|Simple_repeat|Simple_repeat	8334	NM_146359	258356	Mm.457775	NM_146359	ENSMUSG00000048469	Olfr564	MOR14-10	olfactory receptor 564	protein-coding
unique_peak1-1572-14-5-1.31425365963649-1.4372489031793	chr13	31328881	31329521	+	0	NA	intron (NR_045957, intron 1 of 2)	IAPEz-int|LTR|ERVK	3754	NR_045957	73924	Mm.417825	NR_045957	ENSMUSG00000087460	4930401O12Rik	-	RIKEN cDNA 4930401O12 gene	ncRNA
common_peak2-27357-63-100--0.219898891681205-0.49743374032296	chr3	81036052	81037887	+	0	NA	Intergenic	Intergenic	196631	NM_019971	54635	Mm.331089	NM_019971	ENSMUSG00000028019	Pdgfc	1110064L01Rik|AI647969|PDGF-C	platelet-derived growth factor, C polypeptide	protein-coding
unique_peak2-35793-2-7--1.91745425626332-1.45399745587252	chr18	56723418	56724023	+	0	NA	intron (NM_001162989, intron 1 of 4)	B3|SINE|B2	1497	NM_001162989	56698	Mm.214569	NM_019996	ENSMUSG00000008301	Phax	2810055C14Rik|4933427L19Rik|AU018701|AU018854|D18Ertd65e|Rnuxa|p55	phosphorylated adaptor for RNA export	protein-coding
common_peak2-32357-8-7-0.00522241794757061-1.00793137938329	chrX	95026721	95027025	+	0	NA	Intergenic	Lx2B|LINE|L1	-318216	NM_013476	11835	Mm.39005	NM_013476		Ar	AW320017|Tfm	androgen receptor	protein-coding
unique_peak2-38037-10-12--0.344024373132323-0.340565874754526	chr6	38534124	38534575	+	0	NA	intron (NM_001170848, intron 2 of 8)	intron (NM_001170848, intron 2 of 8)	32905	NM_001170848	192196	Mm.276133	NM_138680	ENSMUSG00000029823	Luc7l2	4930471C18Rik|AA522013|AU015269|CGI59|Cgi74	LUC7-like 2 (S. cerevisiae)	protein-coding
unique_peak2-35253-6-5--0.0195643903408542-0.947717972411649	chr17	65666866	65667261	+	0	NA	intron (NM_001289485, intron 14 of 15)	intron (NM_001289485, intron 14 of 15)	223059	NM_001008973	381107	Mm.141275	NM_001008973	ENSMUSG00000045036	Tmem232	E130009J12Rik|Gm940|Tes13-L|Tes13-S	transmembrane protein 232	protein-coding
common_peak2-23182-8-6-0.197867495889966-1.03789460276074	chr15	57753183	57753716	+	0	NA	intron (NM_001081396, intron 3 of 20)	intron (NM_001081396, intron 3 of 20)	9695	NM_001167679	210544	Mm.390835	NM_199300	ENSMUSG00000022364	Tbc1d31	4B3|D330013L20Rik|Gm85|Wdr67	TBC1 domain family, member 31	protein-coding
unique_peak1-3304-16-2-2.53330114154691-3.78760380288747	chr18	77054337	77054989	+	0	NA	Intergenic	Intergenic	-40481	NM_001109743	664805	Mm.329543	NM_001109743	ENSMUSG00000091519	Skor2	Corl2|EG664805|Fussel18|Gm7348	SKI family transcriptional corepressor 2	protein-coding
unique_peak2-34294-3-6--1.22133801201688-1.08602067057793	chr13	75442904	75443196	+	0	NA	Intergenic	Lx9|LINE|L1	215615	NM_013628	18548	Mm.1333	NM_013628	ENSMUSG00000021587	Pcsk1	Nec-1|Nec1|PC1|PC3|Phpp-1|SPC3	proprotein convertase subtilisin/kexin type 1	protein-coding
unique_peak1-1166-7-0-2.79909083029819-2.40823996531185	chr11	99115519	99115985	+	0	NA	Intergenic	B4A|SINE|B4	-10371	NM_172946	268481	Mm.133193	NM_172946	ENSMUSG00000035849	Krt222	6330509G02Rik	keratin 222	protein-coding
common_peak1-18486-23-23-0.136805003787924-0.340939137447793	chr8	84982050	84983238	+	0	NA	Intergenic	B4A|SINE|B4	-56159	NM_008357	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak1-9335-45-49-0.216501835570147-0.465606867440093	chr11	95836381	95837936	+	0	NA	intron (NM_009951, intron 4 of 14)	B2_Mm2|SINE|B2	-12461	NR_037223	100526468		NR_037223	miRBase:MI0014025	Mir3063	mmu-mir-3063	microRNA 3063	ncRNA
unique_peak1-7422-11-3-1.50869358425161-1.95434855131066	chrX	152701706	152702274	+	0	NA	Intergenic	Lx9|LINE|L1	-272036	NR_033598	74941	Mm.484588	NR_033598		4930503H13Rik	-	gem (nuclear organelle) associated protein 8 pseudogene	pseudo
unique_peak2-39231-11-21--0.950738034385684-0.991115276827166	chr8	111337282	111338185	+	0	NA	intron (NM_007496, intron 3 of 9)	intron (NM_007496, intron 3 of 9)	99189	NM_007496	11906	Mm.416972	NM_007496	ENSMUSG00000038872	Zfhx3	A230102L03Rik|Atbf1|WBP9|mKIAA4228	zinc finger homeobox 3	protein-coding
unique_peak1-5488-9-3-1.18961340640422-1.57096726280955	chr5	131835507	131836031	+	0	NA	Intergenic	MTEa|LTR|MaLR	-52377	NM_145218	212996	Mm.299204	NM_145218		Wbscr17	AA388321|E330012B09Rik	Williams-Beuren syndrome chromosome region 17 homolog (human)	protein-coding
unique_peak1-5016-10-0-3.35641534500877-3.31132995230379	chr4	126069850	126070352	+	0	NA	intron (NM_153402, intron 5 of 18)	L1M5|LINE|L1	36685	NM_153402	214150	Mm.440915	NM_153402		Ago3	AW048688|C130014L07Rik|Eif2c3	argonaute RISC catalytic subunit 3	protein-coding
unique_peak1-983-10-5-0.771452844287613-1.33892459842472	chr11	67828153	67828877	+	0	NA	intron (NM_018768, intron 5 of 7)	intron (NM_018768, intron 5 of 7)	48530	NM_018768	55943	Mm.3973	NM_018768	ENSMUSG00000020903	Stx8	0610007H08Rik|1110002H11Rik|4930571E13Rik|CARB	syntaxin 8	protein-coding
common_peak1-13650-29-8-1.9423650791728-4.27327766748815	chr2	26408474	26409327	+	0	NA	Intergenic	Intergenic	-27676	NM_178444	353156	Mm.268933	NM_178444	ENSMUSG00000026921	Egfl7	VE-statin|Zneu1	EGF-like domain 7	protein-coding
common_peak1-15185-81-88-0.396316172042168-1.19485856386623	chr3	152568120	152570293	+	0	NA	intron (NM_012028, intron 2 of 4)	intron (NM_012028, intron 2 of 4)	75965	NM_012028	26938	Mm.40915	NM_012028		St6galnac5	AI851940|Siat7e	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	protein-coding
unique_peak2-36808-4-12--1.72390023199434-1.85743853830261	chr3	84318198	84318639	+	0	NA	intron (NM_001293801, intron 6 of 7)	intron (NM_001293801, intron 6 of 7)	-34057	NM_001033301	229474	Mm.331107	NM_001033301		Fhdc1	6330505N24Rik|Gm126	FH2 domain containing 1	protein-coding
common_peak2-28272-14-11-0.314253659636488-0.435191258261915	chr4	128729321	128729800	+	0	NA	Intergenic	Intergenic	-5955	NM_029219	75234	Mm.259672	NM_029219	ENSMUSG00000028793	Rnf19b	4930534K13Rik|4930555L03Rik|Ibrdc3	ring finger protein 19B	protein-coding
common_peak1-9419-20-31--0.511925215408807-0.634510163964152	chr11	101253437	101254202	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	24775	NM_008061	14377	Mm.18064	NM_008061	ENSMUSG00000078650	G6pc	AW107337|G6Pase|G6pt|Glc-6-Pase	glucose-6-phosphatase, catalytic	protein-coding
common_peak1-13804-21-15-0.569489265266236-0.756118839439552	chr2	45116596	45117506	+	0	NA	Intergenic	Intergenic	-148252	NM_015753	24136	Mm.440702	NM_015753	ENSMUSG00000026872	Zeb2	9130203F04Rik|D130016B08Rik|SIP1|Zfhx1b|Zfx1b|Zfxh1b	zinc finger E-box binding homeobox 2	protein-coding
common_peak1-15435-48-29-1.0640365556263-3.09530603560454	chr4	89123230	89125196	+	0	NA	Intergenic	Lx9|LINE|L1	-167272	NM_007670	12579	Mm.423094	NM_007670	ENSMUSG00000073802	Cdkn2b	AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b	cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)	protein-coding
unique_peak1-797-8-2-1.42025991722641-1.65811743852845	chr11	115785680	115786168	+	0	NA	intron (NM_130454, intron 5 of 18)	intron (NM_130454, intron 5 of 18)	8882	NM_130454	170472	Mm.379351	NM_130454	ENSMUSG00000020752	Recql5	RecQ5|Recq5b|Recql5b	RecQ protein-like 5	protein-coding
common_peak2-30139-26-23-0.342936591437306-0.502376547007663	chr6	142756701	142757372	+	0	NA	Intergenic	L1M4b|LINE|L1	-4050	NM_001145390	330440	Mm.484618	NM_001033417		Gm766	-	predicted gene 766	protein-coding
common_peak2-21884-20-30--0.466121525795682-0.569352520859861	chr12	111574484	111575095	+	0	NA	Intergenic	MTB|LTR|MaLR	57349	NM_172119	107585	Mm.154427	NM_172119	ENSMUSG00000075707	Dio3	-	deiodinase, iodothyronine type III	protein-coding
common_peak2-28034-34-19-1.0601404321139-2.23152841032562	chr4	55651160	55652033	+	0	NA	Intergenic	Intergenic	-106249	NM_010637	16600	Mm.4325	NM_010637	ENSMUSG00000003032	Klf4	EZF|Gklf|Zie	Kruppel-like factor 4 (gut)	protein-coding
unique_peak2-33927-4-5--0.608423014574403-0.909929411522249	chr12	69890112	69890506	+	0	NA	Intergenic	B3|SINE|B2	369864	NM_009093	20090	Mm.379006	NM_009093	ENSMUSG00000034892	Rps29	-	ribosomal protein S29	protein-coding
common_peak1-10337-28-42--0.373305634880635-0.53611512876719	chr13	74639534	74640414	+	0	NA	Intergenic	Intergenic	-8576	NM_146231	235956	Mm.296909	NM_146231		Zfp825	-	zinc finger protein 825	protein-coding
unique_peak2-39706-6-16--1.52206473087004-1.32521814697968	chr9	114978370	114979149	+	0	NA	intron (NM_148958, intron 1 of 9)	ID_B1|SINE|B4	2362	NM_148958	74486	Mm.458474	NM_148958	ENSMUSG00000040875	Osbpl10	4933433D06Rik|C820004B04Rik|OPR-10	oxysterol binding protein-like 10	protein-coding
unique_peak2-33839-9-15--0.81038659359578-0.630231561310125	chr12	11266210	11266823	+	0	NA	intron (NM_177331, intron 3 of 13)	Lx9|LINE|L1	6077	NM_177331	209334	Mm.215295	NM_177331	ENSMUSG00000051235	Gen1	5830483C08Rik	Gen homolog 1, endonuclease (Drosophila)	protein-coding
common_peak2-28194-12-14--0.25811461052088-0.309074325783021	chr4	116650989	116651622	+	0	NA	intron (NM_001029912, intron 8 of 13)	B2_Mm1t|SINE|B2	15675	NM_009478	22275	Mm.46484	NM_009478	ENSMUSG00000028684	Urod	AI323803|Uro-d	uroporphyrinogen decarboxylase	protein-coding
unique_peak2-33442-9-14--0.717277189204299-0.53895475198017	chr11	61683601	61684356	+	0	NA	TTS (NM_019921)	TTS (NM_019921)	-15384	NM_013881	29869	Mm.162025	NM_013881	ENSMUSG00000004798	Ulk2	A830085I22Rik|AU015340|Unc51.2|mKIAA0623	unc-51 like kinase 2	protein-coding
common_peak2-25827-9-9--0.132314688483142-1.03275496310833	chr19	38604792	38605280	+	0	NA	intron (NM_019588, intron 1 of 31)	intron (NM_019588, intron 1 of 31)	6349	NM_019588	74055	Mm.34031	NM_019588	ENSMUSG00000024998	Plce1	4933403A21Rik|PLCepsilon|Plce|mKIAA1516	phospholipase C, epsilon 1	protein-coding
common_peak1-18207-24-59--1.1136806928408-2.7531582050792	chr8	23207577	23208475	+	0	NA	intron (NM_177898, intron 10 of 19)	intron (NM_177898, intron 10 of 19)	27499	NM_177898	330721	Mm.113940	NM_177898	ENSMUSG00000037738	Nek5	6530411J22|BB049667	NIMA (never in mitosis gene a)-related expressed kinase 5	protein-coding
common_peak1-14751-30-45--0.35388654656514-0.51862626278861	chr3	87929641	87930877	+	0	NA	Intergenic	ID_B1|SINE|B4	-16058	NM_133665	17261	Mm.28184	NM_133665	ENSMUSG00000001419	Mef2d	C80750	myocyte enhancer factor 2D	protein-coding
common_peak2-22389-19-32--0.641706792696767-0.800403172662453	chr13	32338101	32339246	+	0	NA	intron (NM_146041, intron 1 of 10)	L1Md_F2|LINE|L1	91740	NM_146041	218138	Mm.247143	NM_146041	ENSMUSG00000038372	Gmds	BC031788|C87208	GDP-mannose 4, 6-dehydratase	protein-coding
common_peak1-12563-40-72--0.530848876128919-1.08340947933384	chr18	10029086	10030102	+	0	NA	intron (NM_001038589, intron 1 of 14)	intron (NM_001038589, intron 1 of 14)	553	NM_021522	59025	Mm.329277	NM_021522	ENSMUSG00000047879	Usp14	2610005K12Rik|2610037B11Rik|AW107924|C78769|ax|nmf375	ubiquitin specific peptidase 14	protein-coding
common_peak1-16267-11-12--0.191746133889479-0.310474156842889	chr5	107988117	107988690	+	0	NA	intron (NM_133248, intron 13 of 18)	L4|LINE|RTE	24673	NM_175241	76421	Mm.67037	NM_175241	ENSMUSG00000089798	1700028K03Rik	-	RIKEN cDNA 1700028K03 gene	protein-coding
unique_peak2-36609-2-5--1.50241675698448-1.08602067057793	chr2	180170997	180171403	+	0	NA	Intergenic	RMER17B|LTR|ERVK	-24483	NM_148933	108115	Mm.133687	NM_148933	ENSMUSG00000038963	Slco4a1	OATP-E|Slc21a12	solute carrier organic anion transporter family, member 4a1	protein-coding
common_peak1-8146-34-26-0.627181024837798-1.12624088074371	chr1	191277916	191278985	+	0	NA	Intergenic	RLTR10|LTR|ERVK	-52298	NM_001281848	16526	Mm.33304	NM_010607	ENSMUSG00000037624	Kcnk2	A430027H14Rik|AI848635|TREK-1	potassium channel, subfamily K, member 2	protein-coding
common_peak1-14192-21-14-0.662598669657717-0.879255460030357	chr2	148013518	148014653	+	0	NA	Intergenic	B4A|SINE|B4	-141380	NM_010446	15376	Mm.938	NM_010446	ENSMUSG00000037025	Foxa2	HNF3-beta|HNF3beta|Hnf-3b|Hnf3b|Tcf-3b|Tcf3b	forkhead box A2	protein-coding
common_peak2-20501-14-13-0.0918612383000403-0.332077462497413	chr10	59425030	59425701	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-10847	NM_029083	74747	Mm.21697	NM_029083	ENSMUSG00000020108	Ddit4	5830413E08Rik|AA415483|REDD1|Rtp801|dig2	DNA-damage-inducible transcript 4	protein-coding
common_peak2-21192-17-45--1.30526561785198-2.66231292118422	chr11	60351945	60352979	+	0	NA	exon (NM_172943, exon 1 of 4)	exon (NM_172943, exon 1 of 4)	1277	NM_172943	268420	Mm.262056	NM_172943	ENSMUSG00000042650	Alkbh5	AW050020|AW215868|Abh5|E130207K11|Ofoxd	alkB, alkylation repair homolog 5 (E. coli)	protein-coding
common_peak1-10336-20-10-1.0286431659539-1.30248952876293	chr13	74563988	74564905	+	0	NA	Intergenic	L1_Mur1|LINE|L1	19933	NR_035409	100124641		NR_035409		Mir692-2b	Mirn692-2b	microRNA 692-2b	ncRNA
unique_peak1-1923-9-4-0.867685311516858-1.36011389749466	chr14	76519806	76520325	+	0	NA	intron (NM_013745, intron 5 of 9)	L1ME1|LINE|L1	9367	NM_013745	27275	Mm.21138	NM_013745	ENSMUSG00000022009	Nufip1	Nufip	nuclear fragile X mental retardation protein interacting protein 1	protein-coding
common_peak1-9985-56-106--0.505871160961903-1.45965363196527	chr13	32964239	32966706	+	0	NA	Intergenic	MER2|DNA|MER2_type	-22418	NM_025429	66222	Mm.20144	NM_025429	ENSMUSG00000044734	Serpinb1a	1190005M04Rik|AI325983|EI|EIA|ELANH2|LEI|M/NEI|MNEI|PI2	serine (or cysteine) peptidase inhibitor, clade B, member 1a	protein-coding
unique_peak2-39096-7-6--0.00826409175941478-0.97990265578305	chr8	77433906	77434335	+	0	NA	Intergenic	Intergenic	37047	NM_001294278	71597	Mm.158735	NM_027837	ENSMUSG00000031621	Isx	9130012O13Rik|Pix-1	intestine specific homeobox	protein-coding
common_peak2-26594-5-6--0.511735258063458-0.947717972411649	chr2	112240024	112240433	+	0	NA	intron (NM_024254, intron 1 of 9)	L1MB8|LINE|L1	20860	NM_024254	72425	Mm.425091	NM_024254	ENSMUSG00000027132	Katnbl1	2410042D21Rik|AA166487|AA473307|AI467442	katanin p80 subunit B like 1	protein-coding
common_peak1-18551-44-52-0.0939723800053365-0.350851889851556	chr8	104340408	104341485	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	968065	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
unique_peak1-521-9-4-0.867685311516858-1.36011389749466	chr1	184026982	184027384	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	-27685	NM_012058	27058	Mm.303071	NM_012058	ENSMUSG00000026511	Srp9	9kDa	signal recognition particle 9	protein-coding
common_peak2-27985-56-55-0.428240903381639-0.97183630865368	chr4	43727304	43728675	+	0	NA	Intergenic	L1M4|LINE|L1	-8551	NM_019486	56015	Mm.377126	NM_019486	ENSMUSG00000046450	Olfr71	MOR262-4|mOR17	olfactory receptor 71	protein-coding
common_peak2-21427-61-89--0.109103766580334-0.346488640381782	chr11	85234169	85235615	+	0	NA	intron (NM_001166643, intron 7 of 23)	intron (NM_001166643, intron 7 of 23)	68226	NM_001166643	192197	Mm.287663	NM_138681	ENSMUSG00000059439	Bcas3	1500019F07Rik|2610028P08Rik|AU021018|BC028339|K20D4|rudhira	breast carcinoma amplified sequence 3	protein-coding
common_peak1-12157-8-8--0.164702583494742-1.00793137938329	chr17	28691518	28691950	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	3712	NR_105935	102465585		NR_105935		Mir6969	mmu-mir-6969	microRNA mir-6969	ncRNA
common_peak1-19400-42-94--0.827526280463764-2.67801674429148	chrX	60404068	60404993	+	0	NA	Intergenic	Intergenic	-624344	NR_045442	75545	Mm.391270	NR_045442	ENSMUSG00000085757	1700019B21Rik	-	RIKEN cDNA 1700019B21 gene	ncRNA
unique_peak2-36329-1-5--2.2120195109379-1.32905871926422	chr2	90548746	90549179	+	0	NA	intron (NM_021512, intron 20 of 36)	intron (NM_021512, intron 20 of 36)	31590	NM_021512	59015	Mm.24532	NM_021512	ENSMUSG00000051329	Nup160	160kDa|2810011M03Rik|AA414952|AU020188|Gtl-13|Gtl1-13|Gtl13|mKIAA0197	nucleoporin 160	protein-coding
unique_peak1-2695-8-0-3.00522241794757-2.70926996097583	chr16	85679640	85680239	+	0	NA	Intergenic	ID_B1|SINE|B4	123421	NM_009621	11504	Mm.1421	NM_009621	ENSMUSG00000022893	Adamts1	ADAM-TS1|ADAMTS|ADAMTS-1|C3-C5|METH-1|METH1	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 1	protein-coding
common_peak2-26036-38-51--0.128987058842561-0.320773676263618	chr2	23067578	23069105	+	0	NA	exon (NM_027635, exon 3 of 11)	exon (NM_027635, exon 3 of 11)	5345	NM_027635	70981	Mm.314026	NM_027635	ENSMUSG00000026774	4931423N10Rik	-	RIKEN cDNA 4931423N10 gene	protein-coding
common_peak1-16450-25-24-0.217993715570381-0.403610417161433	chr5	135651096	135652361	+	0	NA	intron (NM_009745, intron 2 of 5)	B1_Mus1|SINE|Alu	7486	NM_009745	12054	Mm.405834	NM_009745	ENSMUSG00000029681	Bcl7b	-	B cell CLL/lymphoma 7B	protein-coding
unique_peak1-1708-8-1-2.00522241794757-2.05605744720049	chr13	92594355	92594891	+	0	NA	intron (NM_009027, intron 9 of 23)	intron (NM_009027, intron 9 of 23)	306826	NM_009027	19418	Mm.248630	NM_009027		Rasgrf2	6330417G04Rik|AW048350|Grf2|Ras-GRF2	RAS protein-specific guanine nucleotide-releasing factor 2	protein-coding
common_peak2-30372-10-15--0.643584654991231-0.519648556297791	chr7	28867526	28868080	+	0	NA	intron (NM_001122603, intron 3 of 19)	L1Md_F2|LINE|L1	11548	NM_001122603	215384	Mm.292276	NM_175444	ENSMUSG00000047730	Fcgbp	A430096B05Rik	Fc fragment of IgG binding protein	protein-coding
common_peak1-14399-64-50-0.793021059737108-2.60283083993854	chr2	173257486	173260028	+	0	NA	Intergenic	Intergenic	-89336	NM_028158	72221	Mm.46132	NM_028158	ENSMUSG00000027518	1700021F07Rik	-	RIKEN cDNA 1700021F07 gene	protein-coding
common_peak2-31827-11-7-0.508693584251613-1.21681515183528	chr9	44335115	44335480	+	0	NA	promoter-TSS (NM_007551)	promoter-TSS (NM_007551)	-793	NM_007551	12145	Mm.6246	NM_007551	ENSMUSG00000047880	Cxcr5	Blr1|CXC-R5|CXCR-5|Gpcr6|MDR15	chemokine (C-X-C motif) receptor 5	protein-coding
unique_peak1-5745-20-2-2.90311228387004-4.53603905993749	chr6	48601209	48602281	+	0	NA	intron (NM_001286629, intron 3 of 4)	RMER19C|LTR|ERVK	4385	NM_212486	243374	Mm.86514	NM_212486	ENSMUSG00000064262	Gimap8	Gm457|IAN9|IMAP8	GTPase, IMAP family member 8	protein-coding
common_peak1-15633-19-9-1.08075923177432-1.37307999835977	chr4	133878556	133879124	+	0	NA	intron (NM_001039048, intron 4 of 8)	intron (NM_001039048, intron 4 of 8)	7805	NM_001039048	433766	Mm.331961	NM_001039048	ENSMUSG00000028834	Trim63	MuRF1|RF1|Rnf28	tripartite motif-containing 63	protein-coding
common_peak1-14761-15-18--0.235762762887929-0.326591483156968	chr3	88296854	88297562	+	0	NA	promoter-TSS (NM_019390)	promoter-TSS (NM_019390)	26	NM_019390	16905	Mm.243014	NM_019390	ENSMUSG00000028063	Lmna	Dhe	lamin A	protein-coding
common_peak1-9793-20-31--0.511925215408807-0.634510163964152	chr12	64917625	64918387	+	0	NA	Intergenic	Intergenic	657879	NM_001163271	623046	Mm.189552	NM_001163271	ENSMUSG00000043060	Fscb	EG623046	fibrous sheath CABYR binding protein	protein-coding
common_peak2-30576-15-6-1.20480982849805-1.32521814697968	chr7	80058837	80059253	+	0	NA	Intergenic	Intergenic	187909	NR_046024	625243	Mm.261798	NR_046024		Gm6567	-	predicted gene 6567	ncRNA
unique_peak1-6079-22-4-2.32535601020004-3.9780981129625	chr6	120531117	120531948	+	0	NA	Intergenic	Intergenic	26718	NR_045733	73505	Mm.416867	NR_045733		1700072O05Rik	-	RIKEN cDNA 1700072O05 gene	ncRNA
common_peak2-20236-12-19--0.673152109799724-0.546772548767014	chr1	182124826	182125189	+	0	NA	intron (NM_023341, intron 1 of 14)	MER20|DNA|MER1_type	1144	NM_023341	67426	Mm.38330	NM_023341	ENSMUSG00000026489	Adck3	4632432J16Rik|AI462003|Cabc1|mKIAA0451	aarF domain containing kinase 3	protein-coding
common_peak1-18482-94-174--0.321621543983013-1.10203333529024	chr8	84975719	84978653	+	0	NA	Intergenic	Intergenic	-50701	NM_008357	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak2-24935-14-19--0.422711934529718-0.403453972741636	chr17	88631362	88631903	+	0	NA	Intergenic	Lx7|LINE|L1	106780	NM_001190356	225058	Mm.312053	NM_001190356		Gm4832	EG225058	predicted gene 4832	protein-coding
unique_peak2-38642-0-5--3.42509343119537-1.32905871926422	chr7	89541460	89541895	+	0	NA	intron (NM_001190374, intron 3 of 29)	intron (NM_001190374, intron 3 of 29)	57473	NM_001190374	269959	Mm.65306	NM_001190374	ENSMUSG00000070469	Adamtsl3	9230119C12Rik|C130057K09|mKIAA1233	ADAMTS-like 3	protein-coding
common_peak2-21898-65-104--0.222079578188995-0.52060668462483	chr12	4592606	4593699	+	0	NA	Intergenic	ORR1A2|LTR|MaLR	-6662	NM_001198969	20403	Mm.341204	NM_011365	ENSMUSG00000020640	Itsn2	AI327390|Ese2|Sh3d1B|Sh3p18|mKIAA1256	intersectin 2	protein-coding
common_peak1-11541-56-95--0.349366675281913-0.813149881052206	chr16	4880610	4881717	+	0	NA	Intergenic	Intergenic	-1312	NM_145359	207740	Mm.268895	NM_145359		Ubald1	1500031H01Rik|BC013706|Fam100a	UBA-like domain containing 1	protein-coding
unique_peak2-34156-12-26--1.10611151707583-1.26025077975594	chr13	28738339	28739418	+	0	NA	intron (NR_045053, intron 5 of 8)	L1MD2|LINE|L1	63864	NR_105787	102466635		NR_105787	miRBase:MI0021897	Mir6368	mmu-mir-6368	microRNA mir-6368	ncRNA
common_peak2-26910-16-30--0.835932668118813-1.0921097739129	chr2	161108249	161109062	+	0	NA	Intergenic	Intergenic	-173863	NM_173368	71389	Mm.122738	NM_173368	ENSMUSG00000057133	Chd6	5430439G14Rik|6330406J24Rik|CHD-6	chromodomain helicase DNA binding protein 6	protein-coding
common_peak1-8999-97-109-0.402641357967622-1.41273347245023	chr11	60104822	60107410	+	0	NA	intron (NM_153080, intron 1 of 14)	intron (NM_153080, intron 1 of 14)	60291	NM_153080	216810	Mm.218875	NM_153080	ENSMUSG00000000538	Tom1l2	2900016I08Rik|A730055F12Rik|AU042072|Srebf1	target of myb1-like 2 (chicken)	protein-coding
common_peak1-17163-43-78--0.5212175626534-1.16907810239195	chr6	119847285	119848867	+	0	NA	Intergenic	Intergenic	-4640	NM_001166382	19365	Mm.149	NM_011236	ENSMUSG00000030166	Rad52	Rad52yh	RAD52 homolog (S. cerevisiae)	protein-coding
common_peak1-19189-18-20--0.0793982715504091-0.301029995663976	chr9	99575607	99576613	+	0	NA	Intergenic	Intergenic	34372	NM_019815	56492	Mm.386784	NM_019815		Cldn18	-	claudin 18	protein-coding
common_peak1-7540-10-7-0.356415345008769-1.12966497611638	chr1	36243591	36244083	+	0	NA	intron (NM_198899, intron 15 of 40)	ORR1B1|LTR|MaLR	-42679	NR_105862	102465540		NR_105862		Mir6897	mmu-mir-6897	microRNA mir-6897	ncRNA
common_peak1-18558-66-121--0.412253673137045-1.16107346372246	chr8	104442165	104443299	+	0	NA	Intergenic	Intergenic	866279	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
common_peak1-12498-21-6-1.76213434320863-2.81226952737395	chr17	87612624	87613472	+	0	NA	Intergenic	Intergenic	-18766	NR_046016	399626	Mm.396062	NR_046016		C330024C12Rik	-	RIKEN cDNA C330024C12 gene	ncRNA
unique_peak2-39078-8-9--0.316705676939792-1.03275496310833	chr8	73162197	73162723	+	0	NA	Intergenic	Intergenic	-6926	NM_011819	23886	Mm.31325	NM_011819		Gdf15	MIC-1|NAG-1|SBF	growth differentiation factor 15	protein-coding
common_peak1-9353-17-9-0.896368243317676-1.09394599973099	chr11	97322054	97322757	+	0	NA	intron (NM_021493, intron 6 of 18)	intron (NM_021493, intron 6 of 18)	10931	NM_021493	58996	Mm.394118	NM_021493	ENSMUSG00000049807	Arhgap23	A330041B18Rik	Rho GTPase activating protein 23	protein-coding
common_peak1-15346-7-19--1.52283726458917-1.55050753388976	chr4	53631495	53632016	+	0	NA	intron (NM_133891, intron 15 of 15)	B1_Mur1|SINE|Alu	-12588	NM_176966	319636	Mm.103464	NM_176966	ENSMUSG00000054752	Fsd1l	A230072O16Rik|Ccdc10|Csdufd1|Fsd1nl|OTTMUSG00000007002	fibronectin type III and SPRY domain containing 1-like	protein-coding
unique_peak1-2267-19-4-2.08075923177432-3.05312482518673	chr15	78002520	78003107	+	0	NA	intron (NM_025931, intron 1 of 6)	intron (NM_025931, intron 1 of 6)	1725	NM_025931	67042	Mm.30191	NM_025931	ENSMUSG00000016637	Ift27	2600013G09Rik|Rabl4	intraflagellar transport 27	protein-coding
common_peak2-32090-11-9-0.186765489364251-0.344532117358383	chr9	96952003	96952583	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-33519	NM_145134	211949	Mm.491271	NM_145134	ENSMUSG00000046997	Spsb4	D030068E18Rik|SSB-4|Ssb4	splA/ryanodine receptor domain and SOCS box containing 4	protein-coding
common_peak2-27916-13-12-0.0780323124966764-0.334470287753051	chr4	10874092	10874606	+	0	NA	Intergenic	Lx6|LINE|L1	60417	NM_175175	71801	Mm.34351	NM_175175	ENSMUSG00000049969	Plekhf2	1110070J07Rik|AA673237|ZFYVE18	pleckstrin homology domain containing, family F (with FYVE domain) member 2	protein-coding
unique_peak2-37772-7-8--0.370834171144123-1.00793137938329	chr5	115506689	115507097	+	0	NA	intron (NM_029012, intron 1 of 10)	intron (NM_029012, intron 1 of 10)	45360	NM_029012	74585	Mm.355894	NM_029012	ENSMUSG00000029550	Sppl3	4833416I09Rik|Psl4|Usmg3	signal peptide peptidase 3	protein-coding
common_peak1-18906-96-128-0.154823958932075-0.505521895607906	chr9	40799630	40801980	+	0	NA	intron (NM_019465, intron 2 of 9)	intron (NM_019465, intron 2 of 9)	11906	NM_001281954	54698	Mm.42791	NM_019465	ENSMUSG00000032021	Crtam	-	cytotoxic and regulatory T cell molecule	protein-coding
common_peak1-11919-35-29-0.524479662853985-0.895935469411238	chr17	42909563	42911052	+	0	NA	Intergenic	L1Md_F3|LINE|L1	-31179	NM_001033493	435529	Mm.136350	NM_001033493	ENSMUSG00000057899	Gpr111	PGR20	G protein-coupled receptor 111	protein-coding
common_peak1-16864-25-17-0.691924903902794-0.98872314135509	chr6	56831811	56832792	+	0	NA	TTS (NM_001252374)	TTS (NM_001252374)	19579	NM_001252374	107569	Mm.158936	NM_026004	ENSMUSG00000029780	Nt5c3	1600024P05Rik|2610206B05Rik|3110004A18Rik|AI842776|Nt5c3a|Nt5y|PN-1|PN-I|PSN1|UMPH|Umph-1|Umph1|cN-III|lupin|p36	5'-nucleotidase, cytosolic III	protein-coding
unique_peak1-1383-16-5-1.53330114154691-1.80287260729378	chr12	56297482	56298327	+	0	NA	intron (NM_011899, intron 14 of 15)	B3|SINE|B2	-2675	NM_001100116	100101807	Mm.439875	NM_001100116		1700047I17Rik2	-	RIKEN cDNA 1700047I17 gene 2	protein-coding
unique_peak1-1931-23-7-1.72176750450908-2.82905316394614	chr14	76681140	76682138	+	0	NA	Intergenic	Intergenic	-133989	NM_207652	21807	Mm.153272	NM_009366	ENSMUSG00000022010	Tsc22d1	AA589566|AW105905|Egr5|TSC-22|Tgfb1i4|Tsc|Tsc22	TSC22 domain family, member 1	protein-coding
common_peak2-29791-9-5-0.604650905683064-1.21398586181642	chr6	89462295	89462723	+	0	NA	intron (NM_025351, intron 4 of 7)	intron (NM_025351, intron 4 of 7)	83137	NM_025351	66098	Mm.20313	NM_025351	ENSMUSG00000030086	Chchd6	0710001P09Rik|1700021B03Rik	coiled-coil-helix-coiled-coil-helix domain containing 6	protein-coding
common_peak1-17358-10-14--0.550475250599749-0.446472590016315	chr7	24804856	24805623	+	0	NA	Intergenic	RLTR9E|LTR|ERVK	17109	NM_207619	404287	Mm.377931	NM_207619		V1rd19	Vmn1r182	vomeronasal 1 receptor, D19	protein-coding
unique_peak1-6703-5-0-2.29561966399415-1.80617997398389	chr8	34152778	34153224	+	0	NA	Intergenic	B3|SINE|B2	-92503	NM_001177589	100042715	Mm.291093	NM_001177589		Gm3985	-	predicted gene 3985	protein-coding
unique_peak1-6959-11-5-0.923731083530457-1.477227296591	chr8	112010687	112011356	+	0	NA	Intergenic	L1MC4a|LINE|L1	-6906	NM_019938	56523	Mm.42166	NM_019938	ENSMUSG00000031727	Pmfbp1	1700016D22Rik|F77|Stap	polyamine modulated factor 1 binding protein 1	protein-coding
common_peak1-12436-6-5--0.0195643903408542-0.947717972411649	chr17	78736841	78737231	+	0	NA	intron (NM_015800, intron 8 of 16)	L1Md_F2|LINE|L1	80456	NM_001285949	225020	Mm.236835	NM_199448	ENSMUSG00000056121	Fez2	9030616F16|D17Ertd315e	fasciculation and elongation protein zeta 2 (zygin II)	protein-coding
unique_peak1-542-17-6-1.41094141614743-1.84350559086818	chr1	191280740	191281459	+	0	NA	Intergenic	MTB_Mm|LTR|MaLR	-54947	NM_001281848	16526	Mm.33304	NM_010607	ENSMUSG00000037624	Kcnk2	A430027H14Rik|AI848635|TREK-1	potassium channel, subfamily K, member 2	protein-coding
common_peak1-11335-30-30-0.215479099104998-0.419637632935632	chr15	86058645	86059747	+	0	NA	intron (NM_145476, intron 1 of 12)	intron (NM_145476, intron 1 of 12)	14307	NM_145476	223754	Mm.28904	NM_145476	ENSMUSG00000051864	Tbc1d22a	BC023106|D15Ertd781e	TBC1 domain family, member 22a	protein-coding
unique_peak2-38314-1-5--2.2120195109379-1.32905871926422	chr6	145104058	145104464	+	0	NA	intron (NM_001281980, intron 7 of 18)	Lx7|LINE|L1	34002	NM_008511	16970	Mm.843	NM_008511	ENSMUSG00000030263	Lrmp	D6Int3|D6Int4|D6Int5|D6Int7|D6Int8|Jaw1	lymphoid-restricted membrane protein	protein-coding
unique_peak1-5506-8-5-0.420259917226415-1.10484139239135	chr5	136509774	136510209	+	0	NA	Intergenic	Intergenic	-4375	NM_175309	100647	Mm.3089	NM_175309	ENSMUSG00000042985	Upk3b	AI447729|AI957187|P35|PMS2L14|UpIIIb	uroplakin 3B	protein-coding
common_peak1-13236-31-15-1.22523867081312-2.38724857749548	chr19	29215762	29217146	+	0	NA	intron (NM_021525, intron 8 of 8)	intron (NM_021525, intron 8 of 8)	6685	NR_029778	724062		NR_029778		Mir101b	Mirn101b|mir-101b	microRNA 101b	ncRNA
common_peak1-16811-31-12-1.52479895267203-3.2055306048522	chr6	47781265	47782102	+	0	NA	Intergenic	Intergenic	-1179	NM_177882	330301	Mm.128149	NM_177882	ENSMUSG00000051499	Zfp786	A730012O14Rik|Znf786	zinc finger protein 786	protein-coding
unique_peak1-7016-19-3-2.40268732666169-3.59864904409227	chr8	124831111	124832105	+	0	NA	intron (NM_009569, intron 3 of 9)	intron (NM_009569, intron 3 of 9)	25567	NM_009569	22761	Mm.3105	NM_009569	ENSMUSG00000049577	Zfpm1	FOG|Fog1	zinc finger protein, multitype 1	protein-coding
unique_peak2-35704-11-45--2.0148683718054-5.11006289713063	chr18	31930730	31932172	+	0	NA	exon (NM_001242430, exon 3 of 8)	exon (NM_001242430, exon 3 of 8)	11181	NM_001242430	225339	Mm.290804	NM_153515	ENSMUSG00000041915	Ammecr1l	5430429D03Rik|AU022236|AU040755|AW111353|E230022H04Rik	AMME chromosomal region gene 1-like	protein-coding
unique_peak2-33557-8-6-0.197867495889966-1.03789460276074	chr11	83456881	83457299	+	0	NA	Intergenic	RMER17C|LTR|ERVK	5790	NM_011337	20302	Mm.1282	NM_011337	ENSMUSG00000000982	Ccl3	AI323804|G0S19-1|LD78alpha|MIP-1alpha|MIP1-(a)|MIP1-alpha|Mip1a|Scya3	chemokine (C-C motif) ligand 3	protein-coding
common_peak2-24082-13-8-0.608547029195456-0.660903317613904	chr16	31506702	31507225	+	0	NA	Intergenic	Intergenic	78124	NM_001122683	71911	Mm.293470	NM_175177	ENSMUSG00000046598	Bdh1	2310032J20Rik|AI327223|Bdh	3-hydroxybutyrate dehydrogenase, type 1	protein-coding
common_peak2-23963-65-67-0.404703098226788-1.03533151715393	chr16	16599293	16600524	+	0	NA	Intergenic	CpG	-39619	NM_139234	224014	Mm.256131	NM_139232	ENSMUSG00000022788	Fgd4	9030023J02Rik|9330209B17Rik|Frabp|ZFYVE6	FYVE, RhoGEF and PH domain containing 4	protein-coding
common_peak2-30107-29-21-0.652858461977813-1.06916698217164	chr6	135295089	135295973	+	0	NA	Intergenic	Intergenic	-17418	NM_010128	13730	Mm.182785	NM_010128	ENSMUSG00000030208	Emp1	I-8-09|TMP	epithelial membrane protein 1	protein-coding
unique_peak2-33803-5-6--0.511735258063458-0.947717972411649	chr11	120573443	120573745	+	0	NA	intron (NM_016665, intron 1 of 4)	intron (NM_016665, intron 1 of 4)	1487	NM_016665	20892	Mm.259716	NM_016665	ENSMUSG00000025144	Stra13	-	stimulated by retinoic acid 13	protein-coding
common_peak2-26091-34-28-0.524087531873694-0.913161965438643	chr2	165969239	165970057	+	0	NA	intron (NM_028072, intron 1 of 20)	intron (NM_028072, intron 1 of 20)	11137	NM_001252578	72043	Mm.1011	NM_028072	ENSMUSG00000006800	Sulf2	2010004N24Rik|AU020235|MSulf-2|mKIAA1247	sulfatase 2	protein-coding
common_peak2-28263-24-31--0.206790097232283-0.334168439396943	chr4	126677640	126678292	+	0	NA	Intergenic	Intergenic	-20579	NR_045010	71514	Mm.257276	NM_023603	ENSMUSG00000028820	Sfpq	1110004P21Rik|2810416M14Rik|5730453G22Rik|9030402K04Rik|AU021830|D4Ertd314e|Gm12940|OTTMUSG00000009329|PSF|REP1	splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)	protein-coding
common_peak1-15974-15-11-0.4272022498345-0.503257505534083	chr5	31647351	31648051	+	0	NA	intron (NR_105788, intron 7 of 7)	L1_Mus2|LINE|L1	47747	NM_144909	231103	Mm.100043	NM_144909	ENSMUSG00000059434	Gckr	GKRP	glucokinase regulatory protein	protein-coding
common_peak2-30148-13-16--0.30899081061257-0.330004445983672	chr6	145862418	145863399	+	0	NA	Intergenic	Intergenic	-19759	NM_010656	16651	Mm.49689	NM_010656	ENSMUSG00000030255	Sspn	Krag	sarcospan	protein-coding
common_peak2-23584-20-19-0.16614668970383-0.348739088570342	chr15	80024308	80025386	+	0	NA	intron (NM_010795, intron 1 of 1)	intron (NM_010795, intron 1 of 1)	20696	NM_010795	17309	Mm.299693	NM_010795	ENSMUSG00000042428	Mgat3	1110038J12Rik|AI848272|GnT-III	mannoside acetylglucosaminyltransferase 3	protein-coding
common_peak1-12191-21-13-0.762134343208631-1.0220094258199	chr17	32067575	32068473	+	0	NA	Intergenic	Intergenic	-75287	NM_010831	17691	Mm.290941	NM_010831	ENSMUSG00000024042	Sik1	Msk|Sik|Snf1lk	salt inducible kinase 1	protein-coding
common_peak2-20794-14-29--1.00767443525087-1.28534286439185	chr10	121903763	121904481	+	0	NA	Intergenic	Lx2|LINE|L1	18567	NM_016847	54140	Mm.4351	NM_016847	ENSMUSG00000020123	Avpr1a	AVPR|Avpr1|V1a|V1aR	arginine vasopressin receptor 1A	protein-coding
common_peak1-9414-32-24-0.635235829444936-1.08405458203115	chr11	101063013	101064392	+	0	NA	intron (NM_007970, intron 12 of 20)	RSINE1|SINE|B4	24062	NM_007970	14055	Mm.5027	NM_007970	ENSMUSG00000006920	Ezh1	AW557915|mKIAA0388	enhancer of zeste homolog 1 (Drosophila)	protein-coding
common_peak1-10794-40-57--0.199005312376474-0.373449689110125	chr14	76555973	76557268	+	0	NA	Intergenic	MERVL_2A-int|LTR|ERVL	45922	NM_013745	27275	Mm.21138	NM_013745	ENSMUSG00000022009	Nufip1	Nufip	nuclear fragile X mental retardation protein interacting protein 1	protein-coding
common_peak2-20610-26-35--0.24202590928385-0.384630725886657	chr10	80053601	80054458	+	0	NA	promoter-TSS (NM_145421)	promoter-TSS (NM_145421)	-943	NM_145421	216169	Mm.29802	NM_145421	ENSMUSG00000003346	Abhd17a	1700013O15Rik|BC005632|D10Bwg1364e|Fam108a	abhydrolase domain containing 17A	protein-coding
unique_peak2-36802-3-6--1.22133801201688-1.08602067057793	chr3	83609265	83609559	+	0	NA	Intergenic	L1MC3|LINE|L1	36118	NM_011905	24088	Mm.87596	NM_011905	ENSMUSG00000027995	Tlr2	Ly105	toll-like receptor 2	protein-coding
common_peak2-20298-6-6--0.241956811677302-0.947717972411649	chr1	193544291	193544625	+	0	NA	intron (NM_001134829, intron 2 of 7)	intron (NM_001134829, intron 2 of 7)	2184	NM_001134829	226856	Mm.277958	NM_172266	ENSMUSG00000026623	Lpgat1	AI649174|AW112037|BC013667	lysophosphatidylglycerol acyltransferase 1	protein-coding
unique_peak2-34888-4-10--1.48289213249054-1.5150158574804	chr15	80037905	80038498	+	0	NA	intron (NM_010795, intron 1 of 1)	intron (NM_010795, intron 1 of 1)	-26309	NM_178719	239555	Mm.307163	NM_178719	ENSMUSG00000022412	Mief1	A230016E22|AI452372|Smcr7l	mitochondrial elongation factor 1	protein-coding
common_peak2-27860-42-25-1.04188960972609-2.66762268841486	chr3	153912115	153913023	+	0	NA	intron (NM_001081263, intron 10 of 21)	intron (NM_001081263, intron 10 of 21)	80955	NM_010713	16875	Mm.15530	NM_010713	ENSMUSG00000096225	Lhx8	L3|Lhx7	LIM homeobox protein 8	protein-coding
common_peak2-24500-13-23--0.806490470083387-0.781208772652439	chr17	25832988	25833422	+	0	NA	Intergenic	B2_Mm1a|SINE|B2	-20912	NM_022422	64337	Mm.171123	NM_022422	ENSMUSG00000025739	Gng13	1500031D04Rik|AB030194|Ggamma13	guanine nucleotide binding protein (G protein), gamma 13	protein-coding
common_peak1-18821-15-46--1.54242410112198-3.58938495778629	chr9	7764024	7764698	+	0	NA	intron (NM_133739, intron 1 of 4)	CpG	284	NM_133739	71929	Mm.283293	NM_133739	ENSMUSG00000050912	Tmem123	2310075C12Rik	transmembrane protein 123	protein-coding
common_peak1-19024-13-13--0.0288828914198356-0.309074325783021	chr9	63757196	63757925	+	0	NA	Intergenic	Intergenic	112306	NM_008542	17130	Mm.325757	NM_008542	ENSMUSG00000036867	Smad6	Madh6|b2b390Clo	SMAD family member 6	protein-coding
common_peak2-28975-27-63--1.00845404910476-2.53839100311431	chr5	104459044	104460378	+	0	NA	Intergenic	RMER20B|LTR|ERVK	-8896	NM_053262	114664	Mm.46019	NM_053262	ENSMUSG00000029311	Hsd17b11	Dhrs8|Pan1b|SDR2|retSDR2	hydroxysteroid (17-beta) dehydrogenase 11	protein-coding
unique_peak2-37609-2-6--1.72480917832092-1.26211192963361	chr5	64279470	64280000	+	0	NA	intron (NM_029554, intron 2 of 3)	B3A|SINE|B2	76001	NM_029554	76261	Mm.38143	NM_029554	ENSMUSG00000060512	0610040J01Rik	AI662686	RIKEN cDNA 0610040J01 gene	protein-coding
unique_peak2-32677-9-18--1.05831410703937-0.965105923112245	chr1	135857285	135857943	+	0	NA	Intergenic	Intergenic	-39636	NM_054077	116847	Mm.214514	NM_054077	ENSMUSG00000041577	Prelp	7330409J17Rik|SLRR2A	proline arginine-rich end leucine-rich repeat	protein-coding
common_peak1-10175-75-59-0.832176396134766-3.3583995604396	chr13	40867765	40869755	+	0	NA	Intergenic	Intergenic	-39568	NM_011547	21418	Mm.85544	NM_011547	ENSMUSG00000021359	Tfap2a	AP-2|AP2alpha|Ap2|Ap2tf|Tcfap2a	transcription factor AP-2, alpha	protein-coding
common_peak1-11430-45-25-1.15991830720378-3.23036181201156	chr15	99834743	99836207	+	0	NA	intron (NM_001284521, intron 12 of 15)	intron (NM_001284521, intron 12 of 15)	-31757	NR_028124	70281	Mm.484037	NR_028124		2310068J16Rik	-	RIKEN cDNA 2310068J16 gene	ncRNA
common_peak1-11096-24-19-0.471281807880354-0.677583764578261	chr15	59794719	59795937	+	0	NA	Intergenic	Intergenic	52845	NM_027668	71088	Mm.425950	NM_027668	ENSMUSG00000071749	4933412E24Rik	-	RIKEN cDNA 4933412E24 gene	protein-coding
common_peak1-14397-11-7-0.508693584251613-1.21681515183528	chr2	173254860	173255426	+	0	NA	Intergenic	MIR|SINE|MIR	-92950	NM_028158	72221	Mm.46132	NM_028158	ENSMUSG00000027518	1700021F07Rik	-	RIKEN cDNA 1700021F07 gene	protein-coding
unique_peak2-34076-5-6--0.511735258063458-0.947717972411649	chr13	5714156	5714532	+	0	NA	Intergenic	Intergenic	142994	NR_045891	71867	Mm.179181	NR_045891		1700016G22Rik	-	RIKEN cDNA 1700016G22 gene	ncRNA
common_peak2-23189-16-15-0.118263642268062-0.328191099940264	chr15	77905306	77905941	+	0	NA	intron (NM_007583, intron 1 of 3)	intron (NM_007583, intron 1 of 3)	44087	NM_007583	12300	Mm.277338	NM_007583		Cacng2	AW060990|B230105C07Rik|B930041E13Rik|stargazer|stargazin|stg|wag|waggler	calcium channel, voltage-dependent, gamma subunit 2	protein-coding
unique_peak1-284-17-1-3.21829633820504-4.59734841376773	chr1	106875347	106876101	+	0	NA	intron (NM_011800, intron 10 of 11)	intron (NM_011800, intron 10 of 11)	210328	NM_011800	23836	Mm.103640	NM_011800	ENSMUSG00000050840	Cdh20	Cdh7	cadherin 20	protein-coding
common_peak1-9540-21-8-1.39956426382392-2.11898024768848	chr11	116215970	116216762	+	0	NA	intron (NM_027258, intron 9 of 18)	B3|SINE|B2	-19698	NM_008240	15223	Mm.378938	NM_008240	ENSMUSG00000034227	Foxj1	FKHL-13|HFH-4|Hfh4	forkhead box J1	protein-coding
unique_peak2-34840-6-5--0.0195643903408542-0.947717972411649	chr15	75929165	75929600	+	0	NA	Intergenic	Intergenic	-8939	NM_144847	223649	Mm.101946	NM_144847	ENSMUSG00000075590	Nrbp2	BC011468	nuclear receptor binding protein 2	protein-coding
unique_peak1-427-8-1-2.00522241794757-2.05605744720049	chr1	162039799	162040301	+	0	NA	intron (NM_177839, intron 15 of 21)	B4A|SINE|B4	-31934	NR_038031	75255	Mm.414845	NR_038030	ENSMUSG00000026729	4930562F07Rik	-	RIKEN cDNA 4930562F07 gene	ncRNA
common_peak1-17575-10-8-0.186490343566457-1.078512453669	chr7	35646775	35647417	+	0	NA	Intergenic	B1F|SINE|Alu	-49366	NM_175140	68947	Mm.29380	NM_175140	ENSMUSG00000060402	Chst8	1500011J21Rik|AI426009	carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8	protein-coding
common_peak2-22661-46-65--0.146398176109652-0.344471032458745	chr13	95523978	95525495	+	0	NA	Intergenic	L1_Rod|LINE|L1	-34162	NM_009321	21371	Mm.379025	NM_009321	ENSMUSG00000042043	Tbca	Tbca13	tubulin cofactor A	protein-coding
unique_peak2-36109-4-15--2.02346051385325-2.4322161449009	chr2	130563835	130564533	+	0	NA	intron (NM_029432, intron 25 of 36)	intron (NM_029432, intron 25 of 36)	-40929	NM_001081162	269356	Mm.441391	NM_001081162	ENSMUSG00000074796	Slc4a11	AI503023|BTR1|NaBC1	solute carrier family 4, sodium bicarbonate transporter-like, member 11	protein-coding
common_peak2-22193-52-72--0.0815645686143185-0.314891503798722	chr12	108792927	108794825	+	0	NA	Intergenic	Intergenic	179822	NR_045973	74968	Mm.359821	NR_045973	ENSMUSG00000085641	4930465M20Rik	4930431H15Rik	RIKEN cDNA 4930465M20 gene	ncRNA
unique_peak1-6123-11-2-1.92373108353046-2.32232533660526	chr6	129215148	129215849	+	0	NA	Intergenic	Intergenic	9889	NM_001033122	12515	Mm.74745	NM_001033122	ENSMUSG00000030156	Cd69	5830438K24Rik|AI452015|AIM|VEA	CD69 antigen	protein-coding
common_peak1-15279-18-13-0.505564229170747-0.625923329873571	chr4	40269325	40270149	+	0	NA	Intergenic	Intergenic	9472	NR_040663	75819	Mm.399244	NR_040663	ENSMUSG00000087137	4930509K18Rik	-	RIKEN cDNA 4930509K18 gene	ncRNA
common_peak2-21064-8-8--0.164702583494742-1.00793137938329	chr11	48973507	48973966	+	0	NA	exon (NM_146276, exon 1 of 1)	exon (NM_146276, exon 1 of 1)	218	NM_146276	258273	Mm.377407	NM_146276	ENSMUSG00000048378	Olfr1394	MOR280-1	olfactory receptor 1394	protein-coding
common_peak1-18637-30-57--0.688305585635699-1.33966217785262	chr8	111094523	111095327	+	0	NA	intron (NR_077224, intron 1 of 1)	intron (NR_077224, intron 1 of 1)	13652	NR_077224	109215	Mm.65282	NR_077224		3010033K07Rik	-	RIKEN cDNA 3010033K07 gene	ncRNA
common_peak1-18866-9-8-0.0196884049619079-1.03275496310833	chr9	21715192	21715705	+	0	NA	intron (NM_031874, intron 4 of 4)	B4|SINE|B4	7117	NM_031874	19340	Mm.260157	NM_031874	ENSMUSG00000019066	Rab3d	C130057E11Rik	RAB3D, member RAS oncogene family	protein-coding
unique_peak2-34385-4-7--1.02346051385325-1.09384600808989	chr13	119177580	119178037	+	0	NA	Intergenic	RLTR14|LTR|ERV1	-1749	NM_021556	59054	Mm.143810	NM_021556	ENSMUSG00000021731	Mrps30	2610020A16Rik|AA968347|PAP|Pdcd9	mitochondrial ribosomal protein S30	protein-coding
unique_peak2-34128-10-27--1.45093957704883-2.06249767704514	chr13	21832836	21833585	+	0	NA	Intergenic	B2_Mm2|SINE|B2	6245	NM_178210	319159	Mm.486099	NM_178210		Hist1h4j	-	histone cluster 1, H4j	protein-coding
unique_peak2-37845-2-6--1.72480917832092-1.26211192963361	chr5	135537672	135538035	+	0	NA	intron (NM_025375, intron 3 of 12)	B2_Mm2|SINE|B2	-2223	NM_025362	66114	Mm.178012	NM_025362	ENSMUSG00000061118	Dnajc30	1300007M11Rik|Wbscr18	DnaJ (Hsp40) homolog, subfamily C, member 30	protein-coding
common_peak2-24887-27-29-0.0846553552867171-0.333081040816753	chr17	83990336	83991332	+	0	NA	intron (NM_153512, intron 1 of 1)	intron (NM_153512, intron 1 of 1)	40401	NM_153512	225030	Mm.223506	NM_153512	ENSMUSG00000045053	Kcng3	KV6.3|Kv10.1a|Kv10.1b	potassium voltage-gated channel, subfamily G, member 3	protein-coding
common_peak2-20680-18-12-0.612479433087259-0.739965416525508	chr10	88146942	88147625	+	0	NA	Intergenic	Intergenic	-1515	NM_011461	20728	Mm.21642	NM_011461		Spic	AU019198|C76795|Prf|Spi-C	Spi-C transcription factor (Spi-1/PU.1 related)	protein-coding
common_peak1-16821-16-14-0.211373046659543-0.364171515310935	chr6	48509600	48510240	+	0	NA	intron (NM_177736, intron 2 of 2)	RLTR33|LTR|ERVK	5122	NM_177736	243371	Mm.290764	NM_177736	ENSMUSG00000073096	Lrrc61	BC027309	leucine rich repeat containing 61	protein-coding
unique_peak2-36322-4-13--1.83081543591085-2.04196296489515	chr2	84506270	84506917	+	0	NA	exon (NM_001145100, exon 5 of 5)	exon (NM_001145100, exon 5 of 5)	4272	NM_001033166	72657	Mm.259293	NM_001033166	ENSMUSG00000076437	2700094K13Rik	Selh	RIKEN cDNA 2700094K13 gene	protein-coding
common_peak2-31404-31-14-1.3183480752046-2.63673708350641	chr8	90955018	90955706	+	0	NA	Intergenic	Intergenic	-69272	NM_012047	26992	Mm.5400	NM_012047		Brd7	BP75|CELTIX1|Ptpn13ip	bromodomain containing 7	protein-coding
common_peak2-19695-100-108-0.468587450033864-1.85844460945014	chr1	59999387	60001474	+	0	NA	intron (NM_001037725, intron 1 of 7)	RSINE1|SINE|B4	30580	NM_001037725	72750	Mm.258250	NM_001037725	ENSMUSG00000041040	Fam117b	2810425F24Rik|6330416D14Rik|Als2cr13	family with sequence similarity 117, member B	protein-coding
common_peak2-23958-9-6-0.382258484346616-1.11707584880836	chr16	15863495	15863881	+	0	NA	promoter-TSS (NM_029354)	promoter-TSS (NM_029354)	-273	NM_029354	72083	Mm.22351	NM_029354	ENSMUSG00000022671	Mzt2	2410018G20Rik|2610001E06Rik|Fam128|Fam128b	mitotic spindle organizing protein 2	protein-coding
common_peak2-27656-24-23-0.208247402046561-0.407645899519042	chr3	108257197	108257875	+	0	NA	Intergenic	Intergenic	-9359	NM_001204979	20226	Mm.28688	NM_011319	ENSMUSG00000068739	Sars	Sars1|Strs|serRS	seryl-aminoacyl-tRNA synthetase	protein-coding
unique_peak2-36642-11-13--0.298661337805991-0.337263207250336	chr3	9144899	9145620	+	0	NA	Intergenic	ORR1C2|LTR|MaLR	83295	NR_040597	75149	Mm.399324	NR_040597		4930539M17Rik	-	RIKEN cDNA 4930539M17 gene	ncRNA
unique_peak2-34939-7-15--1.20090916970181-0.947446088118041	chr15	89089024	89089603	+	0	NA	intron (NM_026813, intron 6 of 24)	B1_Mus2|SINE|Alu	46850	NR_105924	102465981		NR_105924		Mir6959	mmu-mir-6959	microRNA mir-6959	ncRNA
common_peak2-20129-13-18--0.469455482805817-0.409888142029227	chr1	165633783	165634496	+	0	NA	exon (NM_001143956, exon 3 of 4)	exon (NM_001143956, exon 3 of 4)	21224	NM_001143956	240879	Mm.484621	NM_001143956		Mettl11b	Gm207|NTM1B	methyltransferase like 11B	protein-coding
unique_peak1-1301-68-0-6.5699607792983-NA	chr11	120185267	120187435	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	22376	NR_105900	102465564		NR_105900		Mir6935	mmu-mir-6935	microRNA mir-6935	ncRNA
common_peak1-19468-10-11--0.228547155712387-0.31137425193576	chrX	126765381	126766009	+	0	NA	intron (NM_172493, intron 23 of 26)	L1Md_F2|LINE|L1	481417	NM_172493	54004	Mm.10763	NM_017398	ENSMUSG00000034480	Diap2	Dia3|Diaph2|Drf2|E430022I22Rik	diaphanous homolog 2 (Drosophila)	protein-coding
unique_peak1-5047-12-1-2.64877598508764-3.36932189928148	chr4	134759294	134759873	+	0	NA	Intergenic	Intergenic	69092	NM_013885	29876	Mm.257765	NM_013885	ENSMUSG00000037242	Clic4	D0Jmb3|TU-74|mc3s5|mtCLIC	chloride intracellular channel 4 (mitochondrial)	protein-coding
common_peak1-7860-55-27-1.3972649490951-5.2385696980641	chr1	133129168	133131146	+	0	NA	intron (NM_018750, intron 1 of 5)	intron (NM_018750, intron 1 of 5)	11598	NM_018750	54354	Mm.248291	NM_018750	ENSMUSG00000026430	Rassf5	1300019G20Rik|AU042887|Maxp1|Nore1|Nore1A|Nore1B|Rapl	Ras association (RalGDS/AF-6) domain family member 5	protein-coding
common_peak2-29270-19-27--0.404667595395917-0.464317215211849	chr5	142629445	142630401	+	0	NA	intron (NM_177879, intron 35 of 44)	MTE2b|LTR|MaLR	-247528	NM_199068	17425	Mm.24214	NM_010812	ENSMUSG00000056493	Foxk1	A630048H08Rik|AI463295|ENSMUSG00000075577|Gm10868|Mnf	forkhead box K1	protein-coding
common_peak2-28299-9-8-0.0196884049619079-1.03275496310833	chr4	132353383	132353720	+	0	NA	Intergenic	B1F1|SINE|Alu	-1272	NM_001033308	230787	Mm.290912	NM_001033308	ENSMUSG00000037731	Themis2	ICB-1	thymocyte selection associated family member 2	protein-coding
common_peak1-19185-9-12--0.510826311736872-0.394412252720706	chr9	99153224	99153745	+	0	NA	intron (NM_023873, intron 2 of 17)	intron (NM_023873, intron 2 of 17)	9597	NM_023873	68121	Mm.288739	NM_023873	ENSMUSG00000056267	Cep70	6720484E09Rik|Bite|C030018L16Rik	centrosomal protein 70	protein-coding
common_peak2-26933-49-58-0.123640773663342-0.365132085969548	chr2	163644620	163645255	+	0	NA	Intergenic	Intergenic	-1633	NM_016873	22403	Mm.13828	NM_016873	ENSMUSG00000027656	Wisp2	Ccn5|Crgr4|Ctgfl|Rcop1	WNT1 inducible signaling pathway protein 2	protein-coding
common_peak2-28554-48-90--0.536867488963882-1.34111088227537	chr5	4495082	4497148	+	0	NA	Intergenic	(GAAAA)n|Simple_repeat|Simple_repeat	262101	NM_021457	14362	Mm.246003	NM_021457	ENSMUSG00000044674	Fzd1	AW227548|FZ-1|Fz1	frizzled homolog 1 (Drosophila)	protein-coding
common_peak1-15518-58-45-0.772387978833484-2.35156382971581	chr4	117155058	117156325	+	0	NA	intron (NM_025739, intron 2 of 14)	intron (NM_025739, intron 2 of 14)	13829	NM_025739	66743	Mm.318331	NM_025739	ENSMUSG00000028677	Rnf220	4732477A13|4931406I20Rik|5730503K05Rik|AV302541	ring finger protein 220	protein-coding
unique_peak2-36910-7-6--0.00826409175941478-0.97990265578305	chr3	97768508	97768867	+	0	NA	intron (NM_001033779, intron 1 of 1)	intron (NM_001033779, intron 1 of 1)	34591	NM_001033779	433632	Mm.212421	NM_001033779		Gm5544	EG433632	predicted gene 5544	protein-coding
common_peak1-14066-18-30--0.641277159158523-0.738267116931589	chr2	120153997	120154809	+	0	NA	exon (NM_178851, exon 12 of 25)	exon (NM_178851, exon 12 of 25)	-14502	NM_001024145	271844	Mm.24880	NM_001024145	ENSMUSG00000046971	Pla2g4f	4732472I07Rik|Gm647|Pla2zeta	phospholipase A2, group IVF	protein-coding
common_peak1-8664-28-40--0.304592884796621-0.447010559430123	chr10	128376436	128377660	+	0	NA	intron (NM_008398, intron 3 of 24)	intron (NM_008398, intron 3 of 24)	6179	NM_008398	16404	Mm.179747	NM_008398	ENSMUSG00000025348	Itga7	[a]7|alpha7	integrin alpha 7	protein-coding
common_peak2-31345-140-264--0.229175931990869-0.941592597991209	chr8	84200373	84204223	+	0	NA	intron (NM_001297596, intron 2 of 24)	intron (NM_001297596, intron 2 of 24)	335837	NM_001297593	234515	Mm.324468	NM_001024617	ENSMUSG00000037940	Inpp4b	E130107I17Rik	inositol polyphosphate-4-phosphatase, type II	protein-coding
unique_peak2-33815-4-10--1.48289213249054-1.5150158574804	chr12	25181781	25182254	+	0	NA	Intergenic	B3|SINE|B2	-1429	NM_020614	21340	Mm.39082	NM_020614	ENSMUSG00000059669	Taf1b	4930408G01Rik|A230108M10Rik|TAFI68|Tafi86	TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B	protein-coding
common_peak2-21217-25-17-0.691924903902794-0.98872314135509	chr11	62086473	62087017	+	0	NA	intron (NM_027198, intron 3 of 4)	L1MA8|LINE|L1	8152	NM_027198	69747	Mm.141150	NM_027198	ENSMUSG00000014243	Zswim7	2410012H22Rik	zinc finger SWIM-type containing 7	protein-coding
common_peak1-16877-27-18-0.743618437451651-1.1637339601586	chr6	67102007	67103109	+	0	NA	Intergenic	Intergenic	-114415	NM_001113564	66870	Mm.240490	NM_025814	ENSMUSG00000036371	Serbp1	1200009K13Rik|9330147J08Rik|AL022786|Pairbp1	serpine1 mRNA binding protein 1	protein-coding
unique_peak1-840-12-0-3.64877598508764-4.21441993929574	chr11	11785204	11785716	+	0	NA	TTS (NR_045178)	TTS (NR_045178)	4951	NM_016672	13195	Mm.12906	NM_016672	ENSMUSG00000020182	Ddc	Aadc	dopa decarboxylase	protein-coding
common_peak2-27404-17-19--0.103631756682325-0.301029995663974	chr3	88409668	88410401	+	0	NA	Intergenic	Intergenic	-10095	NM_001198911	16800	Mm.239329	NM_008487	ENSMUSG00000028059	Arhgef2	AA408978|GEF|GEF-H1|GEFH1|LFP40|Lbcl1|Lfc|P40|mKIAA0651	rho/rac guanine nucleotide exchange factor (GEF) 2	protein-coding
common_peak1-10396-12-9-0.326847890200276-0.459837087125828	chr13	96963172	96963712	+	0	NA	Intergenic	ORR1C1|LTR|MaLR	-60910	NM_029210	75209	Mm.40436	NM_029210	ENSMUSG00000051111	Sv2c	4930527L09Rik|AI841971	synaptic vesicle glycoprotein 2c	protein-coding
unique_peak2-36916-8-17--1.16470258349474-1.02063122982878	chr3	98356880	98357602	+	0	NA	exon (NM_008294, exon 4 of 4).2	exon (NM_008294, exon 4 of 4).2	10625	NM_001111336	15495	Mm.14309	NM_008294	ENSMUSG00000095143	Hsd3b4	-	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 4	protein-coding
common_peak1-8892-37-43-0.0665614528485214-0.322992865635707	chr11	48979199	48980722	+	0	NA	Intergenic	RMER19C|LTR|ERVK	6442	NM_146276	258273	Mm.377407	NM_146276	ENSMUSG00000048378	Olfr1394	MOR280-1	olfactory receptor 1394	protein-coding
common_peak1-11405-16-13-0.310908720210457-0.417187467413082	chr15	98672813	98673486	+	0	NA	intron (NM_001033276, intron 43 of 54)	intron (NM_001033276, intron 43 of 54)	-11210	NM_016781	19082	Mm.6670	NM_016781	ENSMUSG00000067713	Prkag1	AA571379|BB036179|Prkaac	protein kinase, AMP-activated, gamma 1 non-catalytic subunit	protein-coding
unique_peak2-38993-4-9--1.34538860874061-1.36011389749466	chr8	45598182	45598665	+	0	NA	Intergenic	Intergenic	-437139	NM_001081286	14107	Mm.27365	NM_001081286	ENSMUSG00000070047	Fat1	2310038E12Rik|AU023433|Fath|mFat1	FAT tumor suppressor homolog 1 (Drosophila)	protein-coding
common_peak1-18345-16-22--0.405298313788951-0.440610794044987	chr8	69088754	69089487	+	0	NA	Intergenic	Intergenic	53481	NM_028927	74419	Mm.159193	NM_028927	ENSMUSG00000025519	Tktl2	4933401I19Rik	transketolase-like 2	protein-coding
common_peak2-32128-13-17--0.391452970804544-0.364171515310935	chr9	105642948	105643683	+	0	NA	intron (NM_001102607, intron 20 of 36)	intron (NM_001102607, intron 20 of 36)	68663	NM_172927	245026	Mm.482507	NM_172927	ENSMUSG00000043719	Col6a6	E330019B14|E330026B02Rik	collagen, type VI, alpha 6	protein-coding
unique_peak1-4784-10-2-1.77145284428761-2.09384600808989	chr3	130796582	130797107	+	0	NA	Intergenic	Intergenic	-16371	NM_010703	16842	Mm.255219	NM_010703	ENSMUSG00000027985	Lef1	3000002B05|AI451430|Lef-1	lymphoid enhancer binding factor 1	protein-coding
unique_peak2-34389-1-5--2.2120195109379-1.32905871926422	chr13	119961729	119962119	+	0	NA	Intergenic	Lx7|LINE|L1	235894	NM_008710	18115	Mm.132584	NM_008710	ENSMUSG00000025453	Nnt	4930423F13Rik|AI323702|BB168308	nicotinamide nucleotide transhydrogenase	protein-coding
common_peak2-26112-15-49--1.63169143921907-4.11413917592912	chr2	5063313	5064231	+	0	NA	intron (NM_028804, intron 2 of 2)	intron (NM_028804, intron 2 of 2)	4950	NM_028804	74186	Mm.274715	NM_028804	ENSMUSG00000026676	Ccdc3	2310045O21Rik	coiled-coil domain containing 3	protein-coding
common_peak2-25233-9-9--0.132314688483142-1.03275496310833	chr18	64075492	64076082	+	0	NA	intron (NM_001014981, intron 22 of 27)	L1Md_T|LINE|L1	207438	NM_001014981	104082	Mm.30850	NM_001014981	ENSMUSG00000040560	Wdr7	AI462727|TRAG|mKIAA0541	WD repeat domain 7	protein-coding
unique_peak2-39923-5-6--0.511735258063458-0.947717972411649	chrX	103650883	103651299	+	0	NA	intron (NM_001007580, intron 4 of 26)	intron (NM_001007580, intron 4 of 26)	29477	NM_001007580	333564	Mm.298000	NM_001007580	ENSMUSG00000033737	Fndc3c1	Fndc3c|Gm784	fibronectin type III domain containing 3C1	protein-coding
unique_peak1-293-9-4-0.867685311516858-1.36011389749466	chr1	121568015	121568386	+	0	NA	intron (NM_019933, intron 25 of 26)	L1MA4|LINE|L1	-22623	NM_145506	226352	Mm.253156	NM_145506	ENSMUSG00000026383	Epb4.1l5	1700030C16Rik|AL022914|BE37|E230025E14Rik|Epb41l5|Lulu1|NBL5	erythrocyte protein band 4.1-like 5	protein-coding
common_peak1-12939-61-88--0.0929841012170574-0.33278119357548	chr19	14596736	14598161	+	0	NA	intron (NM_011600, intron 6 of 19)	L1_Mm|LINE|L1	75025	NM_011600	21888	Mm.103638	NM_011600	ENSMUSG00000024642	Tle4	5730411M05Rik|AA792082|Bce-1|Bce1|ESTM13|ESTM14|Grg4|X83332|X83333	transducin-like enhancer of split 4, homolog of Drosophila E(spl)	protein-coding
common_peak1-15967-11-6-0.701338662194009-1.32595962126035	chr5	31568561	31569145	+	0	NA	intron (NM_026298, intron 21 of 47)	intron (NM_026298, intron 21 of 47)	14774	NM_027221	69815	Mm.389609	NM_027221	ENSMUSG00000029149	Krtcap3	2010001C09Rik|AW321088|Kcp3	keratinocyte associated protein 3	protein-coding
common_peak1-9654-55-64-0.182252058124248-0.458521068983781	chr12	100186640	100188259	+	0	NA	intron (NM_198311, intron 7 of 14)	B4|SINE|B4	28627	NM_198311	76260	Mm.282660	NM_029553	ENSMUSG00000021013	Ttc8	0610012F22Rik|AV001447|BBS8	tetratricopeptide repeat domain 8	protein-coding
common_peak2-26501-48-76--0.295859389460086-0.565429786553928	chr2	84714400	84716301	+	0	NA	intron (NM_199223, intron 2 of 2)	intron (NM_199223, intron 2 of 2)	11499	NM_199223	269295	Mm.86447	NM_199223	ENSMUSG00000050896	Rtn4rl2	Ngr2|Ngrh1|Ngrl3	reticulon 4 receptor-like 2	protein-coding
common_peak1-7660-8-17--1.16470258349474-1.02063122982878	chr1	74390776	74391294	+	0	NA	intron (NM_019999, intron 1 of 8)	intron (NM_019999, intron 1 of 8)	11851	NM_019999	56695	Mm.384726	NM_019999	ENSMUSG00000026179	Pnkd	2210013N15Rik|2810403H05Rik|AI854243|Brp17|MNCb-5687|MR-1|Tahccp2	paroxysmal nonkinesiogenic dyskinesia	protein-coding
unique_peak1-4380-7-2-1.21412832957703-1.45399745587252	chr2	160880443	160880922	+	0	NA	intron (NM_173368, intron 2 of 36)	intron (NM_173368, intron 2 of 36)	54110	NM_173368	71389	Mm.122738	NM_173368	ENSMUSG00000057133	Chd6	5430439G14Rik|6330406J24Rik|CHD-6	chromodomain helicase DNA binding protein 6	protein-coding
unique_peak1-630-16-9-0.796335547380699-0.844317084070804	chr10	31447456	31448173	+	0	NA	intron (NM_001013411, intron 5 of 6)	intron (NM_001013411, intron 5 of 6)	-118283	NM_001146349	268291	Mm.295212	NM_001146349	ENSMUSG00000063760	Rnf217	AU016819|Ibrdc1	ring finger protein 217	protein-coding
common_peak1-8973-10-5-0.771452844287613-1.33892459842472	chr11	58307153	58307565	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-1358	NM_001011770	257932	Mm.340097	NM_001011770	ENSMUSG00000050813	Olfr332	MOR284-2	olfactory receptor 332	protein-coding
unique_peak1-4336-12-4-1.32684789020028-2.04196296489515	chr2	152816283	152816802	+	0	NA	intron (NM_001083618, intron 7 of 14)	B4A|SINE|B4	24577	NM_178939	68559	Mm.12746	NM_178939	ENSMUSG00000027472	Pdrg1	1110004D19Rik|AU020945|AV006589|Pdrg	p53 and DNA damage regulated 1	protein-coding
common_peak1-12755-22-24-0.00342791531268016-0.305461879681376	chr18	60525555	60526544	+	0	NA	Intergenic	ORR1B2-int|LTR|MaLR	-9634	NM_021792	60440	Mm.261140	NM_021792	ENSMUSG00000054072	Iigp1	2900074L10Rik|AI046432|AW111922|Ifgga1|Iigp|Irga6	interferon inducible GTPase 1	protein-coding
unique_peak1-5927-24-1-3.79320990276772-7.14178280843185	chr6	89445075	89446318	+	0	NA	intron (NM_025351, intron 4 of 7)	L1ME3A|LINE|L1	99950	NM_025351	66098	Mm.20313	NM_025351	ENSMUSG00000030086	Chchd6	0710001P09Rik|1700021B03Rik	coiled-coil-helix-coiled-coil-helix domain containing 6	protein-coding
common_peak2-26705-8-5-0.420259917226415-1.10484139239135	chr2	128379524	128379998	+	0	NA	Intergenic	L1Md_F3|LINE|L1	-124674	NR_028590	100043424	Mm.297222	NR_028589		Gm14005	OTTMUSG00000015351	predicted gene 14005	ncRNA
common_peak2-21534-14-14--0.00767443525087419-0.308519316180257	chr11	95402870	95403773	+	0	NA	Intergenic	Intergenic	-27442	NM_130858	104079	Mm.22970	NM_130858	ENSMUSG00000046719	Nxph3	-	neurexophilin 3	protein-coding
common_peak1-12100-12-13--0.158578936969966-0.301029995663979	chr17	25773695	25774378	+	0	NA	intron (NM_029624, intron 5 of 10)	intron (NM_029624, intron 5 of 10)	57917	NR_045520	76483	Mm.12787	NM_029624	ENSMUSG00000002279	Lmf1	2400010G15Rik|AW822050|Tmem112|cld	lipase maturation factor 1	protein-coding
unique_peak1-5030-10-5-0.771452844287613-1.33892459842472	chr4	132074327	132074839	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-8212	NM_144907	230784	Mm.23608	NM_144907		Sesn2	HI95|SEST2|Ses2	sestrin 2	protein-coding
common_peak2-24334-13-6-0.971117108580164-1.01572999746118	chr17	3420142	3420499	+	0	NA	intron (NM_001122998, intron 3 of 26)	B1F|SINE|Alu	23113	NM_011878	24001	Mm.137134	NM_011878	ENSMUSG00000023800	Tiam2	3000002F19Rik|STEF|mKIAA2016	T cell lymphoma invasion and metastasis 2	protein-coding
common_peak2-23164-28-26-0.298071617657994-0.481798116163919	chr14	121877911	121878759	+	0	NA	intron (NM_053079, intron 11 of 22)	MIRb|SINE|MIR	26141	NM_053079	56643	Mm.155618	NM_053079	ENSMUSG00000025557	Slc15a1	D630032F02|PECT1|PEPT1	solute carrier family 15 (oligopeptide transporter), member 1	protein-coding
common_peak2-27143-10-9-0.0344872501214071-1.05503135781948	chr3	27862457	27862911	+	0	NA	intron (NM_001164056, intron 2 of 26)	intron (NM_001164056, intron 2 of 26)	-20409	NM_008875	18805	Mm.212039	NM_008875	ENSMUSG00000027695	Pld1	AA536939|C85393|Pld1a|Pld1b	phospholipase D1	protein-coding
common_peak1-16202-28-34--0.0763238971235038-0.304271119602326	chr5	92823468	92824608	+	0	NA	intron (NM_181728, intron 4 of 9)	intron (NM_181728, intron 4 of 9)	-31716	NR_038116	56066	Mm.131723	NM_019494	ENSMUSG00000060183	Cxcl11	Cxc11|H174|I-tac|Ip9|Itac|Scyb11|Scyb9b|b-R1|betaR1	chemokine (C-X-C motif) ligand 11	protein-coding
unique_peak2-34443-1-8--2.79698201165906-2.05605744720049	chr14	21984834	21985260	+	0	NA	intron (NM_134079, intron 3 of 10)	intron (NM_134079, intron 3 of 10)	89673	NM_001243041	11534	Mm.188734	NM_134079	ENSMUSG00000039197	Adk	2310026J05Rik|5033405D03Rik|AI255373|AI987814|Ak	adenosine kinase	protein-coding
common_peak1-19113-13-14--0.12841856497075-0.301029995663977	chr9	75441368	75441932	+	0	NA	intron (NM_001038710, intron 3 of 9)	intron (NM_001038710, intron 3 of 9)	5290	NM_001038710	50876	Mm.291880	NM_016711	ENSMUSG00000032186	Tmod2	N-Tmod|NTMOD	tropomodulin 2	protein-coding
common_peak1-19061-14-15--0.100783839642355-0.301029995663982	chr9	67633902	67634494	+	0	NA	Intergenic	Intergenic	26954	NM_001081314	75697	Mm.105353	NM_001081314	ENSMUSG00000091956	C2cd4b	3300001A09Rik|Fam148b	C2 calcium-dependent domain containing 4B	protein-coding
common_peak1-13711-9-11--0.395349094316936-0.344532117358383	chr2	30717892	30718362	+	0	NA	intron (NM_009116, intron 1 of 3)	L1MC|LINE|L1	17240	NM_009116	20204	Mm.1802	NM_009116	ENSMUSG00000039476	Prrx2	Prx2|S8	paired related homeobox 2	protein-coding
unique_peak1-5909-11-2-1.92373108353046-2.32232533660526	chr6	88574350	88575014	+	0	NA	intron (NM_001278671, intron 1 of 5)	intron (NM_001278671, intron 1 of 5)	2760	NM_001278671	74589	Mm.196226	NM_029013	ENSMUSG00000033182	Kbtbd12	4833415F11Rik|4933428M03Rik|Klhdc6	kelch repeat and BTB (POZ) domain containing 12	protein-coding
unique_peak2-33229-2-5--1.50241675698448-1.08602067057793	chr10	120423071	120423369	+	0	NA	Intergenic	Intergenic	-6834	NM_001081193	380664	Mm.339371	NM_001081193	ENSMUSG00000048661	Lemd3	AI316861|Man1	LEM domain containing 3	protein-coding
common_peak1-13494-9-14--0.717277189204299-0.53895475198017	chr2	32570835	32571411	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	-2631	NR_039536	100628606		NR_039536		Mir3960	mmu-mir-3960	microRNA 3960	ncRNA
unique_peak2-39720-3-8--1.58390809140159-1.39487600375387	chr9	120764882	120765341	+	0	NA	Intergenic	(T)n|Simple_repeat|Simple_repeat	59257	NR_040742	76402	Mm.436588	NR_040742		1700020M21Rik	-	RIKEN cDNA 1700020M21 gene	ncRNA
common_peak2-20345-128-210--0.0560931866291101-0.326794461299759	chr10	7680554	7682162	+	0	NA	Intergenic	L1ME2|LINE|L1	-5437	NM_138667	68652	Mm.193041	NM_138667	ENSMUSG00000015755	Tab2	1110030N06Rik|A530078N03Rik|Map3k7ip2|mKIAA0733	TGF-beta activated kinase 1/MAP3K7 binding protein 2	protein-coding
unique_peak1-5432-15-3-2.01216475055566-3.03427613622886	chr5	114942064	114942689	+	0	NA	Intergenic	Intergenic	48061	NM_023556	17855	Mm.28088	NM_023556	ENSMUSG00000041939	Mvk	2310010A05Rik|AI256848|AI414037|MK	mevalonate kinase	protein-coding
common_peak2-29427-50-61-0.0867440060920774-0.34378656500321	chr6	8209059	8209844	+	0	NA	promoter-TSS (NM_026632)	promoter-TSS (NM_026632)	163	NR_033518	100036521	Mm.446106	NR_033518	ENSMUSG00000089862	Gm16039	OTTMUSG00000029336	predicted gene 16039	ncRNA
common_peak2-24154-31-31-0.225238670813123-0.416139936131877	chr16	38562803	38563362	+	0	NA	5' UTR (NM_026407, exon 1 of 9)	5' UTR (NM_026407, exon 1 of 9)	155	NM_026407	67846	Mm.310476	NM_026407	ENSMUSG00000002845	Tmem39a	2610033C09Rik	transmembrane protein 39a	protein-coding
unique_peak1-3119-13-5-1.19350952991661-1.95509489018123	chr18	34989012	34989561	+	0	NA	intron (NM_001081256, intron 19 of 23)	B1_Mus2|SINE|Alu	-10957	NM_001204914	225362	Mm.293588	NM_144865	ENSMUSG00000038555	Reep2	-	receptor accessory protein 2	protein-coding
common_peak1-15904-12-11-0.0638134843664826-0.337263207250336	chr5	21056265	21056723	+	0	NA	intron (NM_177076, intron 11 of 19)	MER63C|DNA|AcHobo	7149	NM_028977	74511	Mm.439963	NM_028977	ENSMUSG00000039883	Lrrc17	37kDa|4833425M04Rik|6130400C22Rik|P37nb	leucine rich repeat containing 17	protein-coding
common_peak2-23888-29-42--0.313974674086987-0.439405572480898	chr16	91405725	91406810	+	0	NA	promoter-TSS (NM_008349)	promoter-TSS (NM_008349)	-213	NM_008349	16155	Mm.4154	NM_008349	ENSMUSG00000022969	Il10rb	6620401D04Rik|AI528744|CRF2-4|Crfb4|D16H21S58|D21S58h|IL-10R2|Il10r2	interleukin 10 receptor, beta	protein-coding
common_peak1-17528-53-86--0.301970483432799-0.612703452660502	chr7	28380912	28382236	+	0	NA	intron (NM_001110208, intron 1 of 13)	intron (NM_001110208, intron 1 of 13)	4995	NM_001110208	11652	Mm.177194	NM_007434	ENSMUSG00000004056	Akt2	2410016A19Rik|AW554154|PKB|PKBbeta	thymoma viral proto-oncogene 2	protein-coding
common_peak1-17841-20-3-2.48807478459119-3.8429424127101	chr7	110941594	110942519	+	0	NA	Intergenic	(TTATA)n|Simple_repeat|Simple_repeat	-1712	NM_013619	18368	Mm.377108	NM_013619	ENSMUSG00000047535	Olfr67	3'[b]1|3'beta1|MOR31-1	olfactory receptor 67	protein-coding
unique_peak1-6730-9-0-3.18961340640422-3.01029995663981	chr8	44899131	44899548	+	0	NA	Intergenic	Intergenic	-114494	NM_001079931	384814	Mm.491652	NM_001079931		Gm5347	EG384814	predicted gene 5347	protein-coding
common_peak1-18565-8-10--0.454209200689727-1.078512453669	chr8	105345344	105345834	+	0	NA	Intergenic	Intergenic	-36578	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
common_peak2-21761-13-11-0.193509529916613-0.379391706698377	chr11	116142481	116143048	+	0	NA	5' UTR (NM_010254, exon 1 of 2)	5' UTR (NM_010254, exon 1 of 2)	511	NM_010254	14428	Mm.57149	NM_010254	ENSMUSG00000020793	Galr2	mGalR	galanin receptor 2	protein-coding
common_peak2-29646-20-23--0.0968877161299631-0.305855887145851	chr6	67036584	67037489	+	0	NA	Intergenic	B3|SINE|B2	-49635	NM_007836	13197	Mm.72235	NM_007836	ENSMUSG00000036390	Gadd45a	AA545191|Ddit1|GADD45	growth arrest and DNA-damage-inducible 45 alpha	protein-coding
common_peak1-8500-6-15--1.4346018896197-1.16633110333236	chr10	81648941	81649355	+	0	NA	Intergenic	MTC-int|LTR|MaLR	54872	NM_001105557	237411		NM_172789	ENSMUSG00000062931	Zfp938	B230315N10Rik	zinc finger protein 938	protein-coding
unique_peak2-34825-15-24--0.631691439219068-0.650819692678081	chr15	74998205	74999042	+	0	NA	Intergenic	L1Md_A|LINE|L1	-56244	NM_001099217	100041546	Mm.482110	NM_001099217	ENSMUSG00000022584	Ly6c2	Ly-6C.2|Ly-6C2	lymphocyte antigen 6 complex, locus C2	protein-coding
common_peak2-32180-7-9--0.522837264589173-1.05908390183068	chr9	114390217	114390717	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	15195	NM_009916	12773	Mm.1337	NM_009916	ENSMUSG00000047898	Ccr4	C-C CKR-4|CHEMR1|Cmkbr4|LESTR|Sdf1r	chemokine (C-C motif) receptor 4	protein-coding
common_peak2-22530-57-57-0.408052044951357-0.951659045366379	chr13	55509809	55511884	+	0	NA	intron (NM_011392, intron 10 of 12)	B1_Mur3|SINE|Alu	5747	NM_029303	75477	Mm.432537	NM_029303		Pfn3	1700012P12Rik	profilin 3	protein-coding
common_peak2-31903-9-7-0.18961340640422-1.05908390183068	chr9	57804915	57805284	+	0	NA	intron (NM_011352, intron 8 of 13)	intron (NM_011352, intron 8 of 13)	17157	NM_011352	20361	Mm.335187	NM_011352	ENSMUSG00000038264	Sema7a	2900057C09Rik|CDw108|H-Sema-L|M-Sema-L|Semal	sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A	protein-coding
common_peak2-19818-44-31-0.821892834568535-1.99427374707394	chr1	88474868	88476129	+	0	NA	intron (NM_008801, intron 1 of 4)	ORR1D1|LTR|MaLR	3578	NM_008801	18582	Mm.12925	NM_008801	ENSMUSG00000026239	Pde6d	AI841218|PrBP/delta	phosphodiesterase 6D, cGMP-specific, rod, delta	protein-coding
unique_peak1-6273-9-4-0.867685311516858-1.36011389749466	chr7	25877408	25877878	+	0	NA	3' UTR (NM_001163556, exon 14 of 14)	3' UTR (NM_001163556, exon 14 of 14)	4551	NR_105855	102465968		NR_105855		Mir6537	mmu-mir-6537	microRNA mir-6537	ncRNA
common_peak2-20331-42-63--0.257670672132816-0.451511310064814	chr10	128909271	128910858	+	0	NA	exon (NM_146551, exon 1 of 1)	exon (NM_146551, exon 1 of 1)	314	NM_146551	258544	Mm.377560	NM_146551	ENSMUSG00000049217	Olfr788	MOR111-4	olfactory receptor 788	protein-coding
unique_peak2-35520-1-4--1.94898510510411-1.10720996964787	chr17	50427291	50427582	+	0	NA	exon (NM_001277863, exon 4 of 10)	exon (NM_001277863, exon 4 of 10)	5509	NM_010021	13164	Mm.280641	NM_010021	ENSMUSG00000010592	Dazl	Daz-like|Dazh|Dazl1|Dazla|Tpx-2|Tpx2	deleted in azoospermia-like	protein-coding
common_peak2-29033-13-19--0.543456064249594-0.466170754204149	chr5	114356747	114357511	+	0	NA	intron (NM_011779, intron 1 of 10)	MTC|LTR|MaLR	1586	NM_011779	23790	Mm.260158	NM_011779	ENSMUSG00000004530	Coro1c	AL022675|AW455561|AW548837	coronin, actin binding protein 1C	protein-coding
common_peak1-11887-7-11--0.785871670422967-1.21681515183528	chr16	97534673	97535166	+	0	NA	Intergenic	RMER1B|Other|Other	-43416	NM_019517	56175	Mm.97885	NM_019517	ENSMUSG00000040605	Bace2	1110059C24Rik|AEPLC|AI850424|ALP56|ARP1|ASP21|BAE2|CDA13|CEAP1|DRAP	beta-site APP-cleaving enzyme 2	protein-coding
common_peak2-22289-13-22--0.745089925419244-0.690311289528838	chr13	13538669	13539490	+	0	NA	intron (NM_010917, intron 1 of 19)	RLTR28|LTR|ERVL	9210	NM_010917	18073	Mm.4691	NM_010917	ENSMUSG00000005397	Nid1	A630025O17|Nid|entactin|entactin-1|nidogen-1	nidogen 1	protein-coding
common_peak2-23174-29-33-0.0248272393647717-0.313805205020552	chr15	10714377	10715473	+	0	NA	intron (NR_045063, intron 5 of 6)	L1Md_T|LINE|L1	-43881	NR_040357	100502601	Mm.399434	NR_040357		Gm19276	-	predicted gene, 19276	ncRNA
unique_peak2-35889-4-6--0.830815435910851-0.989110657569874	chr18	90224472	90224946	+	0	NA	Intergenic	L1Md_A|LINE|L1	-286181	NM_001039173	623279	Mm.447164	NM_001039173		Dok6	Dok-6	docking protein 6	protein-coding
common_peak2-29107-40-50--0.013449659220397-0.303180003474857	chr5	122899424	122900936	+	0	NA	Intergenic	Intergenic	27727	NM_019805	56317	Mm.37341	NM_019805	ENSMUSG00000029466	Anapc7	APC7|AW545589	anaphase promoting complex subunit 7	protein-coding
common_peak2-28003-11-11--0.0762689164695427-0.301029995663976	chr4	45949196	45949904	+	0	NA	intron (NM_198660, intron 30 of 37)	intron (NM_198660, intron 30 of 37)	-28657	NM_001290475	100121	Mm.275413	NM_146142	ENSMUSG00000035517	Tdrd7	5730495N10Rik|AI447470|PCTAIRE2BP	tudor domain containing 7	protein-coding
unique_peak2-33100-6-17--1.60452689106201-1.49151883326343	chr10	80701243	80701861	+	0	NA	intron (NM_001034895, intron 2 of 17)	(GGGA)n|Simple_repeat|Simple_repeat	5644	NM_001034895	103406	Mm.158783	NM_001034895	ENSMUSG00000034949	Zfr2	2010013I23Rik|9130206N08Rik|AW045600|mKIAA1086	zinc finger RNA binding protein 2	protein-coding
common_peak1-17229-165-186-0.559442604675566-4.13260956002588	chr6	127328378	127331766	+	0	NA	Intergenic	MIRb|SINE|MIR	-72087	NR_073373	232386	Mm.257367	NR_073373		D130058E03	-	uncharacterized D130058E03	ncRNA
unique_peak2-36501-14-19--0.422711934529718-0.403453972741636	chr2	156196727	156197320	+	0	NA	intron (NM_027585, intron 11 of 12)	intron (NM_027585, intron 11 of 12)	21692	NR_024329	347740	Mm.324242	NR_024329		2900097C17Rik	1810005K14Rik|4930563C06Rik	RIKEN cDNA 2900097C17 gene	ncRNA
common_peak2-29459-24-28--0.0647710923598552-0.301029995663979	chr6	29272187	29273130	+	0	NA	intron (NM_207258, intron 2 of 6)	intron (NM_207258, intron 2 of 6)	3518	NM_001289664	330277	Mm.87624	NM_207258	ENSMUSG00000039742	Fam71f1	GARI-L1|Gm764|NYD-SP18	family with sequence similarity 71, member F1	protein-coding
common_peak1-15451-33-30-0.377141252138654-0.612304185853042	chr4	97868465	97869588	+	0	NA	Intergenic	ORR1E|LTR|MaLR	180930	NM_053157	94043	Mm.331719	NM_053157	ENSMUSG00000028563	Tm2d1	2310026L18Rik|AA990549|Bbp	TM2 domain containing 1	protein-coding
unique_peak2-36511-2-7--1.91745425626332-1.45399745587252	chr2	157446283	157446746	+	0	NA	Intergenic	IAPLTR2a|LTR|ERVK	-54417	NM_016916	53619	Mm.480461	NM_016916	ENSMUSG00000067787	Blcap	AI462828|Bc10	bladder cancer associated protein homolog (human)	protein-coding
unique_peak1-824-7-0-2.79909083029819-2.40823996531185	chr11	7796218	7796703	+	0	NA	Intergenic	RMER17C|LTR|ERVK	-682534	NM_008343	16009	Mm.29254	NM_008343	ENSMUSG00000020427	Igfbp3	AI649005|IGFBP-3|IGgfbp3	insulin-like growth factor binding protein 3	protein-coding
common_peak2-27321-125-358--0.8640146547635-10.5900420484293	chr3	65957007	65959427	+	0	NA	intron (NM_145820, intron 9 of 13)	L1Md_A|LINE|L1	-65592	NM_008987	19288	Mm.276776	NM_008987	ENSMUSG00000027832	Ptx3	AI607804|TSG-14	pentraxin related gene	protein-coding
unique_peak2-36651-8-9--0.316705676939792-1.03275496310833	chr3	12676561	12677055	+	0	NA	Intergenic	RMER17C|LTR|ERVK	-794847	NM_178631	76897	Mm.422625	NM_178631	ENSMUSG00000039717	Ralyl	0710005M24Rik	RALY RNA binding protein-like	protein-coding
unique_peak1-5683-10-2-1.77145284428761-2.09384600808989	chr6	32391707	32392189	+	0	NA	intron (NM_175750, intron 3 of 31)	intron (NM_175750, intron 3 of 31)	-69193	NR_040277	319849	Mm.440860	NR_040277	ENSMUSG00000086763	Plxna4os1	B230378P21Rik	plexin A4, opposite strand 1	ncRNA
unique_peak2-37063-6-12--1.13504160776079-1.45089835786865	chr3	142434192	142434929	+	0	NA	intron (NM_145546, intron 2 of 6)	intron (NM_145546, intron 2 of 6)	6349	NM_145546	229906	Mm.271756	NM_145546	ENSMUSG00000028271	Gtf2b	-	general transcription factor IIB	protein-coding
common_peak1-10708-11-11--0.0762689164695427-0.301029995663976	chr14	60250832	60251377	+	0	NA	TTS (NM_145463)	TTS (NM_145463)	6986	NM_145463	219134	Mm.275409	NM_145463	ENSMUSG00000044461	Shisa2	9430059P22Rik|MAd2|Tmem46|mShisa|shisa	shisa homolog 2 (Xenopus laevis)	protein-coding
unique_peak2-37233-3-11--1.99894559068043-1.95434855131066	chr4	89054947	89055656	+	0	NA	Intergenic	Intergenic	-98360	NM_007670	12579	Mm.423094	NM_007670	ENSMUSG00000073802	Cdkn2b	AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b	cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)	protein-coding
common_peak1-17448-35-48--0.183339585652704-0.360715883817177	chr7	16815998	16817117	+	0	NA	Intergenic	B3|SINE|B2	-9176	NM_027883	71723	Mm.75259	NM_027883	ENSMUSG00000006019	Dhx34	1200013B07Rik|1810012L18Rik|Ddx34|mKIAA0134	DEAH (Asp-Glu-Ala-His) box polypeptide 34	protein-coding
unique_peak2-38799-5-8--0.874305337448166-1.10484139239135	chr7	131187429	131187867	+	0	NA	intron (NM_001252072, intron 1 of 1)	ID4|SINE|ID	60953	NM_001252072	628779	Mm.40210	NM_001252072	ENSMUSG00000078591	Hs3st4	EG628779|Gm6915	heparan sulfate (glucosamine) 3-O-sulfotransferase 4	protein-coding
common_peak1-11218-9-13--0.617741515653384-0.459837087125828	chr15	79107624	79108136	+	0	NA	intron (NM_177580, intron 4 of 13)	B1_Mus2|SINE|Alu	8059	NM_177580	207495	Mm.309647	NM_177580	ENSMUSG00000018126	Baiap2l2	BC048937	BAI1-associated protein 2-like 2	protein-coding
common_peak2-29068-27-31--0.00845404910476422-0.304476922018591	chr5	117360621	117361451	+	0	NA	Intergenic	RMER17C|LTR|ERVK	204966	NM_001122666	71954	Mm.34456	NM_178622	ENSMUSG00000066900	Suds3	2400003N08Rik|2410008L21Rik|AU067672|mSds3	suppressor of defective silencing 3 homolog (S. cerevisiae)	protein-coding
common_peak1-11583-14-5-1.31425365963649-1.4372489031793	chr16	15251683	15252169	+	0	NA	Intergenic	Intergenic	342685	NM_001159351	70620	Mm.235407	NM_023585		Ube2v2	1110021H13Rik|4632410D19Rik|5730524P06Rik|6820402M05|AI848315|C81524|MMS2	ubiquitin-conjugating enzyme E2 variant 2	protein-coding
common_peak2-32358-9-12--0.510826311736872-0.394412252720706	chrX	95165855	95166426	+	0	NA	Intergenic	L1Md_T|LINE|L1	-178949	NM_013476	11835	Mm.39005	NM_013476		Ar	AW320017|Tfm	androgen receptor	protein-coding
unique_peak1-4027-7-0-2.79909083029819-2.40823996531185	chr2	48564786	48565308	+	0	NA	Intergenic	Intergenic	-104582	NM_007396	11480	Mm.314338	NM_007396	ENSMUSG00000052155	Acvr2a	ActrIIa|Acvr2|TactrII	activin receptor IIA	protein-coding
common_peak1-19220-16-34--1.0110193746769-1.55539563639961	chr9	106685079	106685803	+	0	NA	intron (NM_030730, intron 1 of 21)	intron (NM_030730, intron 1 of 21)	6103	NM_030730	81000	Mm.246689	NM_030730	ENSMUSG00000040661	Rad54l2	Arip4|D130058C05|G630026H09Rik|Srisnf2l	RAD54 like 2 (S. cerevisiae)	protein-coding
common_peak2-20249-22-28--0.210696890040167-0.337923771396236	chr1	184260294	184261428	+	0	NA	intron (NM_175127, intron 1 of 4)	intron (NM_175127, intron 1 of 4)	10876	NM_175127	67948	Mm.30737	NM_175127	ENSMUSG00000047539	Fbxo28	4833428J17Rik|5730505P19Rik|D1Ertd578e|Fbx28|mKIAA0483	F-box protein 28	protein-coding
common_peak1-9444-31-31-0.225238670813123-0.416139936131877	chr11	102644000	102645098	+	0	NA	Intergenic	Intergenic	21784	NM_008122	14615	Mm.390369	NM_008122	ENSMUSG00000034520	Gjc1	C130009G16Rik|Cnx45|Cx45|Gja-7|Gja7	gap junction protein, gamma 1	protein-coding
common_peak1-15694-26-56--0.904990922006279-2.03490996975666	chr4	139352035	139352987	+	0	NA	intron (NM_011039, intron 4 of 8)	intron (NM_011039, intron 4 of 8)	36372	NM_011039	18509	Mm.218760	NM_011039	ENSMUSG00000028736	Pax7	Pax-7	paired box 7	protein-coding
unique_peak2-35756-7-8--0.370834171144123-1.00793137938329	chr18	38993114	38993588	+	0	NA	Intergenic	LTR41|LTR|ERVL	-58759	NM_001033789	545253	Mm.244585	NM_001033789		Gm5820	EG545253	predicted gene 5820	protein-coding
common_peak2-30753-7-10--0.660340788339108-1.12966497611638	chr7	120634736	120635114	+	0	NA	Intergenic	L1Md_T|LINE|L1	-22423	NM_001285831	67420	Mm.206919	NM_026143	ENSMUSG00000030759	Far1	2600011M19Rik|2900034E22Rik|3732409C05Rik|AI850429|Mlstd2	fatty acyl CoA reductase 1	protein-coding
common_peak1-14051-20-9-1.16614668970383-1.52222891542741	chr2	119250909	119251700	+	0	NA	intron (NM_026574, intron 22 of 35)	intron (NM_026574, intron 22 of 35)	52061	NM_026574	68142	Mm.330496	NM_026574	ENSMUSG00000034154	Ino80	2310079N15Rik|4632409L19Rik|Inoc1	INO80 homolog (S. cerevisiae)	protein-coding
common_peak2-30386-17-24--0.425559851569687-0.427564438475253	chr7	29981084	29981796	+	0	NA	intron (NM_001164658, intron 13 of 27)	intron (NM_001164658, intron 13 of 27)	-15748	NM_026545	57296	Mm.273152	NM_026545	ENSMUSG00000030591	Psmd8	6720456J22Rik|AA407360|AL033291|AL033322|AL033323|C76433	proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	protein-coding
common_peak2-23210-39-56--0.217128767245588-0.402440571782907	chr15	102399279	102400349	+	0	NA	intron (NM_146065, intron 2 of 10)	L1Md_F2|LINE|L1	-44441	NR_033409	54615	Mm.445915	NM_018787	ENSMUSG00000023052	Npff	-	neuropeptide FF-amide peptide precursor	protein-coding
common_peak1-10880-70-39-1.29803882148804-6.00309679309964	chr15	77905069	77908085	+	0	NA	intron (NM_007583, intron 1 of 3)	intron (NM_007583, intron 1 of 3)	43133	NM_007583	12300	Mm.277338	NM_007583		Cacng2	AW060990|B230105C07Rik|B930041E13Rik|stargazer|stargazin|stg|wag|waggler	calcium channel, voltage-dependent, gamma subunit 2	protein-coding
common_peak2-26785-9-20--1.20270401637454-1.23014042908325	chr2	145903063	145903685	+	0	NA	Intergenic	Intergenic	142854	NM_175280	78774	Mm.136347	NM_175280	ENSMUSG00000037143	Cfap61	4930529M08Rik|BB178539|BC024760	cilia and flagella associated protein 61	protein-coding
unique_peak2-35894-13-19--0.543456064249594-0.466170754204149	chr19	3323300	3324277	+	0	NA	intron (NM_013495, intron 1 of 18)	CpG	487	NM_013495	12894	Mm.18522	NM_013495	ENSMUSG00000024900	Cpt1a	C730027G07|CPTI|Cpt1	carnitine palmitoyltransferase 1a, liver	protein-coding
common_peak2-30852-31-36-0.0157853051841732-0.304004708442489	chr7	135608439	135609882	+	0	NA	Intergenic	RLTR15|LTR|ERVK	-4133	NM_009383	21843	Mm.242072	NM_009383	ENSMUSG00000030846	Tial1	5330433G13Rik|AL033329|TIAR|mTIAR	Tia1 cytotoxic granule-associated RNA binding protein-like 1	protein-coding
common_peak2-21272-14-29--1.00767443525087-1.28534286439185	chr11	69913890	69914454	+	0	NA	intron (NM_007493, intron 7 of 8)	Lx3_Mus|LINE|L1	8026	NM_007493	11890	Mm.1357	NM_007493	ENSMUSG00000040963	Asgr2	ASGPR2|Asgr|Asgr-2	asialoglycoprotein receptor 2	protein-coding
common_peak1-9017-31-37--0.0226888426304619-0.301029995663945	chr11	61207794	61209181	+	0	NA	Intergenic	IAP-d-int|LTR|ERVK	-16910	NM_026183	67473	Mm.100741	NM_026183	ENSMUSG00000010122	Slc47a1	1300013J15Rik|AI036982|MATE1|mMATE1	solute carrier family 47, member 1	protein-coding
unique_peak2-34364-2-8--2.08737925770563-1.65811743852845	chr13	107094750	107095120	+	0	NA	Intergenic	Intergenic	632060	NM_029665	76582	Mm.132208	NM_029665	ENSMUSG00000042590	Ipo11	1700081H05Rik|2510001A17Rik|AI314624|AW555235|E330021B14Rik|Ranbp11	importin 11	protein-coding
common_peak2-20046-17-25--0.482143379936054-0.479250674391597	chr1	143739291	143740024	+	0	NA	Intergenic	CT-rich|Low_complexity|Low_complexity	-1186678	NR_040604	75910	Mm.483845	NR_040604		4930590L20Rik	-	RIKEN cDNA 4930590L20 gene	ncRNA
common_peak1-17543-31-36-0.0157853051841732-0.304004708442489	chr7	29281160	29282187	+	0	NA	promoter-TSS (NR_033605)	promoter-TSS (NR_033605)	-287	NR_033605	70001	Mm.417851	NR_033605		1700028B04Rik	-	NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8 pseudogene	pseudo
common_peak2-27237-42-36-0.532875962238234-1.0880568139457	chr3	52069226	52070651	+	0	NA	Intergenic	Intergenic	-2321	NM_019739	56458	Mm.29891	NM_019739	ENSMUSG00000044167	Foxo1	AI876417|Afxh|FKHR|Fkhr1|Foxo1a	forkhead box O1	protein-coding
common_peak2-25064-114-112-0.64377555929318-3.50290887101224	chr18	34758626	34759995	+	0	NA	3' UTR (NM_030147, exon 22 of 22)	3' UTR (NM_030147, exon 22 of 22)	-2188	NM_177773	271508	Mm.417609	NM_177773	ENSMUSG00000049357	4933408B17Rik	-	RIKEN cDNA 4933408B17 gene	protein-coding
common_peak1-11529-116-160-0.163212455394804-0.556644870593806	chr16	4213029	4214916	+	0	NA	promoter-TSS (NM_001025432)	promoter-TSS (NM_001025432)	-568	NM_001025432	12914	Mm.132238	NM_001025432	ENSMUSG00000022521	Crebbp	AW558298|CBP|CBP/p300|KAT3A|p300/CBP	CREB binding protein	protein-coding
common_peak2-28083-17-20--0.174021084573723-0.306598483909156	chr4	83309183	83309890	+	0	NA	exon (NM_001081012, exon 16 of 26)	exon (NM_001081012, exon 16 of 26)	138087	NM_001081012	320226	Mm.180032	NM_029117	ENSMUSG00000052407	Ccdc171	4930418J05Rik|4930473A06Rik|A330015D16Rik	coiled-coil domain containing 171	protein-coding
common_peak1-8463-29-23-0.527327579893955-0.844067898188802	chr10	80072010	80072918	+	0	NA	TTS (NR_105877)	TTS (NR_105877)	459	NR_105877	102465550		NR_105877		Mir6912	mmu-mir-6912	microRNA mir-6912	ncRNA
common_peak1-9008-7-12--0.901348887842903-1.31827279259406	chr11	60417587	60417984	+	0	NA	Intergenic	B2_Mm2|SINE|B2	66600	NM_172943	268420	Mm.262056	NM_172943	ENSMUSG00000042650	Alkbh5	AW050020|AW215868|Abh5|E130207K11|Ofoxd	alkB, alkylation repair homolog 5 (E. coli)	protein-coding
common_peak2-22551-53-83--0.251344410362832-0.504282745370237	chr13	59822338	59823812	+	0	NA	Intergenic	Intergenic	9430	NM_001167593	238662	Mm.295939	NM_001167593	ENSMUSG00000091311	Spata31d1b	EG238662|Fam75d1b|Gm4934	spermatogenesis associated 31 subfamily D, member 1B	protein-coding
common_peak1-18917-12-14--0.25811461052088-0.309074325783021	chr9	44305155	44305883	+	0	NA	Intergenic	B1F|SINE|Alu	-1700	NM_030256	80288	Mm.370270	NM_030256	ENSMUSG00000063382	Bcl9l	B9L|BC003321|BCL9-2|DLNB11	B cell CLL/lymphoma 9-like	protein-coding
unique_peak1-3945-13-8-0.608547029195456-0.660903317613904	chr2	29629229	29629924	+	0	NA	TTS (NM_145520)	TTS (NM_145520)	12528	NM_001177392	433416	Mm.330112	NM_001034887	ENSMUSG00000075425	Gm13547	OTTMUSG00000012686	predicted gene 13547	protein-coding
unique_peak1-3236-16-1-3.11826364226806-4.46429741251234	chr18	61959810	61960614	+	0	NA	3' UTR (NM_198649, exon 23 of 23)	3' UTR (NM_198649, exon 23 of 23)	-13896	NM_178928	106877	Mm.26632	NM_178928	ENSMUSG00000033032	Afap1l1	AI173486	actin filament associated protein 1-like 1	protein-coding
common_peak2-28795-23-21-0.262335885871783-0.416752705545949	chr5	64610712	64611385	+	0	NA	intron (NM_019636, intron 2 of 19)	intron (NM_019636, intron 2 of 19)	-10548	NM_001289514	57915	Mm.286353	NM_019636	ENSMUSG00000029174	Tbc1d1	1110062G02Rik|AI385682|AW555803|Tbc1|mKIAA1108	TBC1 domain family, member 1	protein-coding
common_peak2-23862-16-10-0.658832023630764-0.699649909729472	chr15	102395354	102395895	+	0	NA	intron (NM_146065, intron 2 of 10)	B1_Mur1|SINE|Alu	-40251	NR_033409	54615	Mm.445915	NM_018787	ENSMUSG00000023052	Npff	-	neuropeptide FF-amide peptide precursor	protein-coding
unique_peak2-37788-2-5--1.50241675698448-1.08602067057793	chr5	120811877	120812272	+	0	NA	Intergenic	Intergenic	-69821	NM_008499	16873	Mm.5151	NM_008499	ENSMUSG00000029595	Lhx5	Lim2	LIM homeobox protein 5	protein-coding
common_peak1-15996-14-8-0.729291158915332-0.771068449301682	chr5	33377886	33378534	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	16745	NM_011738	22629	Mm.332314	NM_011738	ENSMUSG00000018965	Ywhah	-	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide	protein-coding
common_peak2-25634-8-6-0.197867495889966-1.03789460276074	chr19	9083124	9083663	+	0	NA	exon (NM_009643, exon 5 of 5)	exon (NM_009643, exon 5 of 5)	19619	NM_001286518	66395	Mm.203866	NM_009643	ENSMUSG00000069833	Ahnak	DY6	AHNAK nucleoprotein (desmoyokin)	protein-coding
unique_peak2-38328-4-7--1.02346051385325-1.09384600808989	chr6	147741299	147741809	+	0	NA	Intergenic	Intergenic	102791	NR_033636	100039727	Mm.396220	NR_033636	ENSMUSG00000085077	1700049E15Rik	Gm15761|OTTMUSG00000026044	RIKEN cDNA 1700049E15 gene	ncRNA
unique_peak1-3868-7-5-0.214128329577033-1.01466476204226	chr2	10047967	10048493	+	0	NA	intron (NM_010582, intron 3 of 20)	intron (NM_010582, intron 3 of 20)	4080	NM_010582	16425	Mm.182043	NM_010582	ENSMUSG00000037254	Itih2	AI747202|Intin2|Itih-2	inter-alpha trypsin inhibitor, heavy chain 2	protein-coding
common_peak2-23850-27-21-0.532114332257938-0.800403172662453	chr15	102044780	102045564	+	0	NA	3' UTR (NM_001289695, exon 7 of 7)	3' UTR (NM_001289695, exon 7 of 7)	10170	NM_001289695	68744	Mm.352945	NM_153194	ENSMUSG00000046897	Zfp740	1110034O07Rik|AW548228|Znf740	zinc finger protein 740	protein-coding
common_peak1-9408-13-19--0.543456064249594-0.466170754204149	chr11	100969056	100969752	+	0	NA	intron (NM_026501, intron 1 of 8)	intron (NM_026501, intron 1 of 8)	11734	NM_026501	67998	Mm.33881	NM_026501	ENSMUSG00000017802	Fam134c	1300010M03Rik|4933404C01Rik|AI551748	family with sequence similarity 134, member C	protein-coding
common_peak2-20007-12-7-0.648775985087639-0.697979855752659	chr1	134985431	134985906	+	0	NA	intron (NM_001099276, intron 16 of 32)	B1_Mur1|SINE|Alu	-42075	NM_133819	108954	Mm.293628	NM_133819	ENSMUSG00000046062	Ppp1r15b	1810033K10Rik|AI606441|C530022L24Rik|CReP	protein phosphatase 1, regulatory (inhibitor) subunit 15b	protein-coding
common_peak1-17569-35-16-1.34390741721217-3.08659436536937	chr7	35080501	35081801	+	0	NA	Intergenic	Intergenic	-10523	NM_172741	233103	Mm.491097	NM_172741	ENSMUSG00000066571	4931406P16Rik	AA553327|mKIAA0355	RIKEN cDNA 4931406P16 gene	protein-coding
common_peak2-26927-10-12--0.344024373132323-0.340565874754526	chr2	163574036	163574535	+	0	NA	intron (NM_001272052, intron 1 of 11)	intron (NM_001272052, intron 1 of 11)	1690	NM_007398	11486	Mm.388	NM_007398	ENSMUSG00000017697	Ada	-	adenosine deaminase	protein-coding
common_peak1-10017-53-52-0.41305255785273-0.940907383351645	chr13	6607220	6609435	+	0	NA	intron (NM_001291071, intron 8 of 21)	intron (NM_001291071, intron 8 of 21)	39690	NM_019703	56421	Mm.273874	NM_019703	ENSMUSG00000021196	Pfkp	1200015H23Rik|9330125N24Rik|ATP-PFK|PFK-C|PFK-P	phosphofructokinase, platelet	protein-coding
common_peak1-9688-13-10-0.319040412000471-0.446472590016315	chr12	16893214	16893758	+	0	NA	Intergenic	Intergenic	-8298	NM_009072	19878	Mm.276024	NM_009072	ENSMUSG00000020580	Rock2	B230113H15Rik|ROKalpha|Rho-kinase|Rock-II|Rock2m|mKIAA0619	Rho-associated coiled-coil containing protein kinase 2	protein-coding
common_peak1-10890-34-28-0.524087531873694-0.913161965438643	chr15	87653233	87654608	+	0	NA	Intergenic	Intergenic	-27547	NR_105817	102465209		NR_105817	miRBase:MI0021927	Mir6393	mmu-mir-6393	microRNA mir-6393	ncRNA
unique_peak2-39734-4-8--1.19338551529556-1.21878474469819	chr9	122735766	122736205	+	0	NA	exon (NM_001013405, exon 8 of 11)	exon (NM_001013405, exon 8 of 11)	21320	NM_001013405	382117	Mm.215892	NM_001013405	ENSMUSG00000046603	Tcaim	D9Ertd402e|Gm1129|TOAG-1	T cell activation inhibitor, mitochondrial	protein-coding
unique_peak2-33531-2-8--2.08737925770563-1.65811743852845	chr11	76912381	76912869	+	0	NA	intron (NM_176965, intron 17 of 17)	intron (NM_176965, intron 17 of 17)	-20686	NM_001012309	237859	Mm.156195	NM_001012309	ENSMUSG00000037958	Ccdc55	8030451K07|AI851076|AL022898|NSpr70|NSrp70|Nsrp1	coiled-coil domain containing 55	protein-coding
unique_peak1-7402-16-7-1.11826364226806-1.23399803405144	chrX	126760916	126761615	+	0	NA	intron (NM_172493, intron 23 of 26)	intron (NM_172493, intron 23 of 26)	476987	NM_172493	54004	Mm.10763	NM_017398	ENSMUSG00000034480	Diap2	Dia3|Diaph2|Drf2|E430022I22Rik	diaphanous homolog 2 (Drosophila)	protein-coding
common_peak2-28982-38-49--0.0724035304761941-0.303268666669768	chr5	105699871	105700828	+	0	NA	3' UTR (NM_194336, exon 11 of 11)	3' UTR (NM_194336, exon 11 of 11)	22369	NM_194336	100702	Mm.491210	NM_194336	ENSMUSG00000079362	Gbp6	AI595338|Mpa2l	guanylate binding protein 6	protein-coding
common_peak2-19742-22-28--0.210696890040167-0.337923771396236	chr1	74390201	74391339	+	0	NA	intron (NM_019999, intron 1 of 8)	L1MC4a|LINE|L1	11586	NM_019999	56695	Mm.384726	NM_019999	ENSMUSG00000026179	Pnkd	2210013N15Rik|2810403H05Rik|AI854243|Brp17|MNCb-5687|MR-1|Tahccp2	paroxysmal nonkinesiogenic dyskinesia	protein-coding
common_peak1-12786-21-12-0.869049547125143-1.18646456559501	chr18	63901497	63902282	+	0	NA	intron (NM_001014981, intron 12 of 27)	B1_Mur2|SINE|Alu	33540	NM_001014981	104082	Mm.30850	NM_001014981	ENSMUSG00000040560	Wdr7	AI462727|TRAG|mKIAA0541	WD repeat domain 7	protein-coding
unique_peak1-6413-28-7-2.05295911982146-4.28647646517482	chr7	83846856	83848009	+	0	NA	intron (NM_001199224, intron 19 of 22)	intron (NM_001199224, intron 19 of 22)	472659	NM_001199224	244071	Mm.322829	NM_172902	ENSMUSG00000025754	Agbl1	Ccp4|D430020F16|EG244071|Nna1-l1	ATP/GTP binding protein-like 1	protein-coding
common_peak1-17631-9-9--0.132314688483142-1.03275496310833	chr7	47031211	47031651	+	0	NA	Intergenic	Intergenic	258295	NM_001004139	70227	Mm.333800	NM_001004139	ENSMUSG00000068959	Zfp619	3000002G13Rik	zinc finger protein 619	protein-coding
common_peak1-19155-21-13-0.762134343208631-1.0220094258199	chr9	92275584	92276616	+	0	NA	Intergenic	Intergenic	71885	NM_001033184	78459	Mm.179195	NM_001033184	ENSMUSG00000074139	1700057G04Rik	-	RIKEN cDNA 1700057G04 gene	protein-coding
common_peak2-21779-17-15-0.218296338205038-0.403453972741633	chr11	117534990	117535674	+	0	NA	intron (NM_198022, intron 1 of 21)	RLTR12B|LTR|ERVK	19729	NM_198022	217351	Mm.40272	NM_198022	ENSMUSG00000025571	Tnrc6c	9930033H14Rik|mKIAA1582	trinucleotide repeat containing 6C	protein-coding
common_peak2-27031-7-6--0.00826409175941478-0.97990265578305	chr2	175206415	175206758	+	0	NA	intron (NM_001177404, intron 2 of 2).3	MurSatRep1|Unknown|Unknown	8623	NM_001177406	100303732	Mm.484983	NM_001177404		Gm14431	OTTMUSG00000016608	predicted gene 14431	protein-coding
unique_peak1-5797-8-1-2.00522241794757-2.05605744720049	chr6	61431454	61431977	+	0	NA	intron (NM_183310, intron 5 of 10)	L1Md_F2|LINE|L1	-300911	NR_040287	100504262	Mm.438066	NR_040287		A730020E08Rik	-	RIKEN cDNA A730020E08 gene	ncRNA
common_peak2-30461-29-47--0.472672420106045-0.683734619884041	chr7	45680008	45681288	+	0	NA	Intergenic	Intergenic	839256	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak2-38854-3-6--1.22133801201688-1.08602067057793	chr7	144577787	144578091	+	0	NA	intron (NM_029886, intron 3 of 3)	intron (NM_029886, intron 3 of 3)	24500	NM_029886	77252	Mm.29184	NM_029886	ENSMUSG00000040139	9430038I01Rik	-	RIKEN cDNA 9430038I01 gene	protein-coding
common_peak2-20607-9-5-0.604650905683064-1.21398586181642	chr10	80024071	80024466	+	0	NA	promoter-TSS (NM_025852)	promoter-TSS (NM_025852)	37	NM_025852	66932	Mm.1116	NM_025852	ENSMUSG00000047417	Rexo1	1700021P10Rik|2610511M11Rik|AW050347|EloA-BP1|Tceb3bp1	REX1, RNA exonuclease 1 homolog (S. cerevisiae)	protein-coding
unique_peak1-5019-8-2-1.42025991722641-1.65811743852845	chr4	128737003	128737559	+	0	NA	intron (NM_029219, intron 1 of 8)	intron (NM_029219, intron 1 of 8)	1766	NM_029219	75234	Mm.259672	NM_029219	ENSMUSG00000028793	Rnf19b	4930534K13Rik|4930555L03Rik|Ibrdc3	ring finger protein 19B	protein-coding
unique_peak1-4893-7-0-2.79909083029819-2.40823996531185	chr4	44123294	44123591	+	0	NA	Intergenic	Intergenic	-11323	NR_040414	623796	Mm.490409	NR_040414	ENSMUSG00000084274	Gm12504	OTTMUSG00000007209	prothymosin alpha pseudogene	pseudo
common_peak1-17849-28-20-0.660641697042702-1.00055860626307	chr7	112269069	112270460	+	0	NA	promoter-TSS (NM_207557)	promoter-TSS (NM_207557)	-209	NM_207557	404318	Mm.377938	NM_207557	ENSMUSG00000095248	Olfr681	MOR4014	olfactory receptor 681	protein-coding
common_peak2-28748-50-54-0.259580602954292-0.562042725830394	chr5	38259657	38260801	+	0	NA	Intergenic	B3A|SINE|B2	-44405	NM_010835	17701	Mm.256509	NM_010835	ENSMUSG00000048450	Msx1	AA675338|AI324650|Hox-7|Hox7|Hox7.1|msh	msh homeobox 1	protein-coding
unique_peak1-567-13-4-1.45654393575041-2.23384849113406	chr10	25787860	25788587	+	0	NA	intron (NM_029881, intron 1 of 1)	intron (NM_029881, intron 1 of 1)	-9838	NR_028030	100040851	Mm.478630	NR_028030	ENSMUSG00000039098	Gm9767	ENSMUSG00000039098	predicted gene 9767	ncRNA
unique_peak1-199-10-1-2.35641534500877-2.57096726280955	chr1	82807272	82807808	+	0	NA	Intergenic	Intergenic	-28518	NM_010472	15463	Mm.392569	NM_010472	ENSMUSG00000026159	Agfg1	AU045498|C130049H11Rik|C85612|D730048C23Rik|Hrb|RAB|Rip	ArfGAP with FG repeats 1	protein-coding
common_peak1-7972-45-48-0.245648181229663-0.50619083865892	chr1	156938591	156940152	+	0	NA	Intergenic	Intergenic	7395	NM_010500	15939	Mm.12246	NM_010500	ENSMUSG00000056708	Ier5	-	immediate early response 5	protein-coding
unique_peak1-723-7-2-1.21412832957703-1.45399745587252	chr10	93619959	93620403	+	0	NA	intron (NM_011629, intron 2 of 13)	(TTTTG)n|Simple_repeat|Simple_repeat	9505	NM_011629	22025	Mm.107483	NM_011629	ENSMUSG00000005897	Nr2c1	4831444H07Rik|80.3|Eenr|TR2|Tr2-11	nuclear receptor subfamily 2, group C, member 1	protein-coding
common_peak1-18974-16-14-0.211373046659543-0.364171515310935	chr9	56075500	56076203	+	0	NA	intron (NM_172924, intron 5 of 6)	intron (NM_172924, intron 5 of 6)	-66974	NM_019793	56434	Mm.28484	NM_019793	ENSMUSG00000032324	Tspan3	1700055K04Rik|TM4-A|Tm4sf8	tetraspanin 3	protein-coding
common_peak1-8848-52-72--0.0815645686143185-0.314891503798722	chr11	30771034	30772793	+	0	NA	intron (NM_134013, intron 43 of 46)	B1_Mus1|SINE|Alu	-13445	NM_175490	237716	Mm.338361	NM_175490	ENSMUSG00000043999	Gpr75	-	G protein-coupled receptor 75	protein-coding
unique_peak1-1826-10-4-1.03448725012141-1.5150158574804	chr14	34139844	34140494	+	0	NA	intron (NM_153800, intron 4 of 10)	intron (NM_153800, intron 4 of 10)	110160	NM_153800	239027	Mm.318350	NM_153800	ENSMUSG00000063506	Arhgap22	B230341L19Rik|RHOGAP2|p68RacGAP	Rho GTPase activating protein 22	protein-coding
unique_peak1-3001-9-6-0.382258484346616-1.11707584880836	chr17	83979680	83980189	+	0	NA	Intergenic	Intergenic	51301	NM_153512	225030	Mm.223506	NM_153512	ENSMUSG00000045053	Kcng3	KV6.3|Kv10.1a|Kv10.1b	potassium voltage-gated channel, subfamily G, member 3	protein-coding
common_peak1-18886-9-7-0.18961340640422-1.05908390183068	chr9	34280305	34280740	+	0	NA	Intergenic	Intergenic	-15794	NM_026324	67703	Mm.220710	NM_026324		Kirrel3	1500010O20Rik|2900036G11Rik|NEPH2|SST4|mKIAA1867	kin of IRRE like 3 (Drosophila)	protein-coding
common_peak1-17494-10-15--0.643584654991231-0.519648556297791	chr7	25218881	25219619	+	0	NA	intron (NM_199013, intron 2 of 2)	B1F|SINE|Alu	11451	NM_199013	210145	Mm.33811	NM_199013	ENSMUSG00000062028	Irgc1	F630044M05Rik|Gm1102|Gm474|Ifgge|Iigp5|Irgc	immunity-related GTPase family, cinema 1	protein-coding
common_peak2-30413-14-28--0.958764834769927-1.16796998271031	chr7	38183117	38184046	+	0	NA	Intergenic	Intergenic	371190	NM_172385	243937	Mm.322505	NM_172385	ENSMUSG00000043456	Zfp536	9630010P11Rik|Znf536|mKIAA0390	zinc finger protein 536	protein-coding
common_peak2-20020-20-27--0.319280137466411-0.412012472183092	chr1	135731103	135732007	+	0	NA	Intergenic	Intergenic	72195	NM_054076	269120	Mm.59985	NM_054076	ENSMUSG00000010311	Optc	-	opticin	protein-coding
common_peak2-25289-11-11--0.0762689164695427-0.301029995663976	chr18	69924803	69925308	+	0	NA	Intergenic	Intergenic	-160158	NM_201362	381175	Mm.266831	NM_201362	ENSMUSG00000038903	Ccdc68	BC046343	coiled-coil domain containing 68	protein-coding
unique_peak1-1565-8-0-3.00522241794757-2.70926996097583	chr13	30138734	30139401	+	0	NA	Intergenic	Intergenic	-61135	NM_010093	13557	Mm.268356	NM_010093	ENSMUSG00000016477	E2f3	E2F3b|E2f3a	E2F transcription factor 3	protein-coding
common_peak1-8621-35-75--0.816557254981081-2.20923096619066	chr10	117375766	117376936	+	0	NA	intron (NR_045342, intron 3 of 3)	intron (NR_045342, intron 3 of 3)	13836	NR_045342	71067	Mm.410793	NR_045342		4933411E08Rik	-	RIKEN cDNA 4933411E08 gene	ncRNA
unique_peak2-37081-0-5--3.42509343119537-1.32905871926422	chr3	149311144	149311459	+	0	NA	Intergenic	(TA)n|Simple_repeat|Simple_repeat	373600	NR_040591	381482	Mm.393866	NR_040591		Gm1653	-	predicted gene 1653	ncRNA
common_peak2-29084-24-41--0.599107520011044-0.83607543869935	chr5	121384875	121385677	+	0	NA	Intergenic	L1Md_F3|LINE|L1	20449	NM_133893	100535	Mm.247620	NM_133893	ENSMUSG00000032623	Oas1d	AA536864|C85127|oasl8	2'-5' oligoadenylate synthetase 1D	protein-coding
unique_peak1-4649-10-1-2.35641534500877-2.57096726280955	chr3	88880011	88880758	+	0	NA	intron (NM_138679, intron 26 of 26)	intron (NM_138679, intron 26 of 26)	13569	NM_001083808	72296	Mm.27687	NM_028188	ENSMUSG00000041263	Rusc1	2210403N08Rik|AA408288|NESCA	RUN and SH3 domain containing 1	protein-coding
common_peak1-11193-170-185-0.619113688542104-5.04076592515277	chr15	77797857	77802074	+	0	NA	intron (NM_018749, intron 1 of 14)	intron (NM_018749, intron 1 of 14)	1289	NM_018749	55944	Mm.3955	NM_018749	ENSMUSG00000016554	Eif3d	66/67kDa|AA407891|Eif3s7|eIF3p66	eukaryotic translation initiation factor 3, subunit D	protein-coding
common_peak2-28454-11-7-0.508693584251613-1.21681515183528	chr4	150837293	150837646	+	0	NA	intron (NM_001081557, intron 4 of 23)	B4A|SINE|B4	398408	NM_001081557	100072	Mm.318846	NM_001081557	ENSMUSG00000014592	Camta1	1810059M14Rik|2310058O09Rik|AI316882|AW987475|mKIAA0833	calmodulin binding transcription activator 1	protein-coding
common_peak2-24516-11-13--0.298661337805991-0.337263207250336	chr17	26605883	26606441	+	0	NA	Intergenic	Intergenic	39255	NM_013642	19252	Mm.239041	NM_013642	ENSMUSG00000024190	Dusp1	3CH134|MKP1|Ptpn16|U19515|erp|mkp-1	dual specificity phosphatase 1	protein-coding
unique_peak1-2127-13-5-1.19350952991661-1.95509489018123	chr15	53342587	53343250	+	0	NA	intron (NM_177225, intron 4 of 4)	B2_Mm2|SINE|B2	-165180	NM_010162	14042	Mm.309395	NM_010162		Ext1	AA409028	exostoses (multiple) 1	protein-coding
unique_peak1-6585-17-7-1.21829633820504-1.55050753388977	chr7	143005916	143006688	+	0	NA	Intergenic	MLT1A|LTR|MaLR	-98240	NM_001081117	17345	Mm.4078	NM_001081117	ENSMUSG00000031004	Mki67	D630048A14Rik|Ki-67|Ki67	antigen identified by monoclonal antibody Ki 67	protein-coding
unique_peak1-3655-20-3-2.48807478459119-3.8429424127101	chr19	38976039	38976934	+	0	NA	intron (NM_145952, intron 6 of 12)	B1F|SINE|Alu	-28994	NM_008234	15201	Mm.57223	NM_008234		Hells	AI323785|E130115I21Rik|LSH|Lysh|PASG|YFK8	helicase, lymphoid specific	protein-coding
common_peak1-9569-10-11--0.228547155712387-0.31137425193576	chr11	117968707	117969408	+	0	NA	intron (NM_001167746, intron 18 of 80)	MTEa|LTR|MaLR	21476	NM_001167746	69926	Mm.473893	NM_001167746	ENSMUSG00000033987	Dnah17	2810003K23Rik|Dnahc17|Dnahcl1|Gm1178|mKIAA3028	dynein, axonemal, heavy chain 17	protein-coding
common_peak2-28164-3-7--1.41398308995928-1.23214870625617	chr4	108165487	108165835	+	0	NA	intron (NM_175472, intron 5 of 30)	L3|LINE|CR1	33630	NM_175472	230594	Mm.25181	NM_175472	ENSMUSG00000034610	Zcchc11	6030404K05Rik|9230115F04Rik|PPAPD3|mKIAA0191	zinc finger, CCHC domain containing 11	protein-coding
unique_peak2-34165-11-27--1.29866133780599-1.81053432848961	chr13	31468246	31468966	+	0	NA	Intergenic	Intergenic	-135651	NR_045957	73924	Mm.417825	NR_045957	ENSMUSG00000087460	4930401O12Rik	-	RIKEN cDNA 4930401O12 gene	ncRNA
unique_peak2-36606-3-15--2.41398308995928-2.80787975886178	chr2	179177191	179177473	+	0	NA	exon (NM_009867, exon 1 of 16)	exon (NM_009867, exon 1 of 16)	149	NM_009867	12561	Mm.184711	NM_009867	ENSMUSG00000000305	Cdh4	AW120700|R-Cadh|R-cadherin|Rcad	cadherin 4	protein-coding
unique_peak1-6736-9-4-0.867685311516858-1.36011389749466	chr8	45719711	45720218	+	0	NA	Intergenic	Intergenic	-315598	NM_001081286	14107	Mm.27365	NM_001081286	ENSMUSG00000070047	Fat1	2310038E12Rik|AU023433|Fath|mFat1	FAT tumor suppressor homolog 1 (Drosophila)	protein-coding
unique_peak2-36330-3-6--1.22133801201688-1.08602067057793	chr2	90560483	90560901	+	0	NA	intron (NM_021512, intron 28 of 36)	intron (NM_021512, intron 28 of 36)	-24835	NM_018828	55935	Mm.489638	NM_018828	ENSMUSG00000008200	Fnbp4	FBP30|Fnbp30|mKIAA1014	formin binding protein 4	protein-coding
common_peak1-19469-31-15-1.22523867081312-2.38724857749548	chrX	126773207	126774178	+	0	NA	intron (NM_172493, intron 23 of 26)	intron (NM_172493, intron 23 of 26)	489414	NM_172493	54004	Mm.10763	NM_017398	ENSMUSG00000034480	Diap2	Dia3|Diaph2|Drf2|E430022I22Rik	diaphanous homolog 2 (Drosophila)	protein-coding
common_peak1-9532-58-62-0.31867001139058-0.747189460713368	chr11	116023180	116024721	+	0	NA	intron (NM_172571, intron 5 of 30)	intron (NM_172571, intron 5 of 30)	5542	NM_172571	217335	Mm.35241	NM_172571	ENSMUSG00000020776	Fbf1	1110033G01Rik|5930413D20|mKIAA1863	Fas (TNFRSF6) binding factor 1	protein-coding
common_peak2-27720-19-9-1.08075923177432-1.37307999835977	chr3	122729761	122730254	+	0	NA	intron (NM_021503, intron 2 of 5)	B1F|SINE|Alu	7898	NM_021503	59006	Mm.141157	NM_021503	ENSMUSG00000028116	Myoz2	1110012I24Rik|Fatz-2|Myozl2	myozenin 2	protein-coding
unique_peak2-37842-4-6--0.830815435910851-0.989110657569874	chr5	135489301	135489697	+	0	NA	promoter-TSS (NR_026688)	promoter-TSS (NR_026688)	-472	NR_026688	69812	Mm.18422	NR_026688	ENSMUSG00000085042	Abhd11os	2010001M06Rik|AI462243|Wbscr26|Wnscr26	abhydrolase domain containing 11, opposite strand	ncRNA
common_peak1-17571-12-7-0.648775985087639-0.697979855752659	chr7	35119565	35120225	+	0	NA	Intergenic	RLTR11B|LTR|ERVK	-49267	NM_172741	233103	Mm.491097	NM_172741	ENSMUSG00000066571	4931406P16Rik	AA553327|mKIAA0355	RIKEN cDNA 4931406P16 gene	protein-coding
unique_peak1-2549-10-1-2.35641534500877-2.57096726280955	chr16	23498547	23499167	+	0	NA	intron (NM_008555, intron 2 of 15)	intron (NM_008555, intron 2 of 15)	21806	NM_008555	17174	Mm.1213	NM_008555	ENSMUSG00000022887	Masp1	AW048060|CCPII|Crarf|Masp1/3	mannan-binding lectin serine peptidase 1	protein-coding
common_peak1-16262-20-17-0.318149783148881-0.440610794044987	chr5	107437642	107438373	+	0	NA	Intergenic	L1VL4|LINE|L1	44427	NM_001271566	12545	Mm.20842	NM_009863	ENSMUSG00000029283	Cdc7	AI597260|Cdc7l1|muCdc7	cell division cycle 7 (S. cerevisiae)	protein-coding
unique_peak2-34101-2-13--2.72480917832092-2.79529063155376	chr13	14021780	14022398	+	0	NA	Intergenic	Intergenic	-24852	NM_178640	97884	Mm.21686	NM_178640	ENSMUSG00000039242	B3galnt2	A930105D20Rik|C80633|D230016N13Rik	UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	protein-coding
common_peak2-26647-9-11--0.395349094316936-0.344532117358383	chr2	120026930	120027443	+	0	NA	intron (NM_177845, intron 1 of 19)	intron (NM_177845, intron 1 of 19)	43885	NM_177845	329502	Mm.330505	NM_177845	ENSMUSG00000050211	Pla2g4e	2310026J01Rik|C230096D22|Pla2epsilon	phospholipase A2, group IVE	protein-coding
common_peak1-11327-110-57-1.54401676525107-12.9030216214539	chr15	85664088	85666235	+	0	NA	intron (NM_001033337, intron 3 of 13)	intron (NM_001033337, intron 3 of 13)	2427	NM_001033337	239570	Mm.151748	NM_001033337	ENSMUSG00000035944	Ttc38	9030019H09	tetratricopeptide repeat domain 38	protein-coding
common_peak2-27514-11-13--0.298661337805991-0.337263207250336	chr3	95356495	95357204	+	0	NA	intron (NM_001267695, intron 7 of 7)	B1_Mus1|SINE|Alu	-6750	NM_026489	67981	Mm.179050	NM_026489	ENSMUSG00000028109	Hormad1	4921522K05Rik|Nohma	HORMA domain containing 1	protein-coding
common_peak2-27265-21-17-0.399564263823923-0.561823156887258	chr3	57286467	57287356	+	0	NA	intron (NM_133784, intron 3 of 6)	L1MC3|LINE|L1	57579	NM_145539	229302	Mm.26618	NM_145539	ENSMUSG00000027801	Tm4sf4	Iltmp	transmembrane 4 superfamily member 4	protein-coding
common_peak2-31747-14-9-0.577288065470282-0.630231561310125	chr9	18473253	18473782	+	0	NA	Intergenic	Intergenic	86560	NM_146606	18322	Mm.246530	NM_146606	ENSMUSG00000054141	Olfr24	MOR132-1|MTPCR51	olfactory receptor 24	protein-coding
unique_peak1-1885-11-2-1.92373108353046-2.32232533660526	chr14	62987385	62987711	+	0	NA	intron (NM_026001, intron 9 of 10)	Lx8|LINE|L1	36606	NM_026001	67153	Mm.26040	NM_026001	ENSMUSG00000021932	Rnaseh2b	1110019N06Rik|2610207P08Rik|Dleu8	ribonuclease H2, subunit B	protein-coding
common_peak1-11875-42-29-0.835438732258665-1.96184293807029	chr16	94370030	94371398	+	0	NA	intron (NM_139145, intron 5 of 9)	intron (NM_139145, intron 5 of 9)	138749	NM_139145	110948	Mm.30921	NM_139145	ENSMUSG00000040820	Hlcs	410I21.SP6|D16Jhu34	holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase)	protein-coding
common_peak1-13341-31-27-0.41788374875552-0.64171680596148	chr19	44135200	44136173	+	0	NA	intron (NM_001164359, intron 5 of 11)	B4|SINE|B4	8490	NM_145502	226144	Mm.279865	NM_145502	ENSMUSG00000025198	Erlin1	2810439N09Rik|C80197|Keo4|Spfh1	ER lipid raft associated 1	protein-coding
common_peak1-13639-11-22--1.0148683718054-1.11267835143409	chr2	25557796	25558386	+	0	NA	intron (NM_153558, intron 5 of 6)	intron (NM_153558, intron 5 of 6)	2497	NM_153558	227627	Mm.44630	NM_153558	ENSMUSG00000062061	Obp2a	BC027556|Lcn13	odorant binding protein 2A	protein-coding
common_peak2-27270-64-56-0.632556387543862-1.85815517112339	chr3	57304698	57305687	+	0	NA	intron (NM_133784, intron 3 of 6)	intron (NM_133784, intron 3 of 6)	74606	NM_133784	97064	Mm.405029	NM_133784	ENSMUSG00000027803	Wwtr1	2310058J06Rik|2610021I22Rik|C78399|Taz	WW domain containing transcription regulator 1	protein-coding
unique_peak1-2144-11-7-0.508693584251613-1.21681515183528	chr15	58537814	58538491	+	0	NA	Intergenic	Intergenic	116830	NM_175212	74868	Mm.293754	NM_175212	ENSMUSG00000062373	Tmem65	2610029O13Rik|4930438D12Rik	transmembrane protein 65	protein-coding
common_peak1-13279-24-24-0.149353712992992-0.367910579842133	chr19	37830669	37831783	+	0	NA	Intergenic	RLTR15|LTR|ERVK	58928	NM_007811	13082	Mm.42230	NM_007811	ENSMUSG00000024987	Cyp26a1	Cyp26|P450RA|P450RAI|RAH	cytochrome P450, family 26, subfamily a, polypeptide 1	protein-coding
common_peak2-28573-6-7--0.434601889619698-0.97990265578305	chr5	8719613	8720058	+	0	NA	intron (NM_011076, intron 18 of 27)	intron (NM_011076, intron 18 of 27)	59743	NM_011076	18671	Mm.207354	NM_011076	ENSMUSG00000040584	Abcb1a	Abcb4|Evi32|Mdr1a|Mdr3|P-gp|Pgp|Pgy-3|Pgy3|mdr-3	ATP-binding cassette, sub-family B (MDR/TAP), member 1A	protein-coding
common_peak2-23063-76-93-0.207355534185644-0.576514982614061	chr14	72709122	72710787	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	399856	NM_207636	319448	Mm.205421	NM_207636	ENSMUSG00000033487	Fndc3a	1700094E19Rik|D14Ertd453e|F730017H24Rik|Fndc3|sys	fibronectin type III domain containing 3A	protein-coding
unique_peak1-1239-9-5-0.604650905683064-1.21398586181642	chr11	113283487	113284050	+	0	NA	intron (NM_027216, intron 5 of 9)	intron (NM_027216, intron 5 of 9)	143361	NM_001166503	69806	Mm.341021	NM_027216	ENSMUSG00000041654	Slc39a11	1810074D23Rik	solute carrier family 39 (metal ion transporter), member 11	protein-coding
unique_peak2-38393-1-4--1.94898510510411-1.10720996964787	chr7	19338969	19339401	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-32466	NR_024208	20958	Mm.423480	NR_024208		Sycp1-ps1	Sycp1-rs	synaptonemal complex protein 1, pseudogene 1	pseudo
common_peak2-29036-81-110-0.0776337366584592-0.347910620254477	chr5	114378605	114381722	+	0	NA	Intergenic	Intergenic	-21448	NM_011779	23790	Mm.260158	NM_011779	ENSMUSG00000004530	Coro1c	AL022675|AW455561|AW548837	coronin, actin binding protein 1C	protein-coding
common_peak2-20361-5-9--1.02630843089322-1.21398586181642	chr10	12695243	12695720	+	0	NA	Intergenic	ID_B1|SINE|B4	-11416	NM_001163591	74732	Mm.248648	NM_029075	ENSMUSG00000039232	Stx11	5830405C08Rik	syntaxin 11	protein-coding
unique_peak2-37175-2-5--1.50241675698448-1.08602067057793	chr4	46564375	46564628	+	0	NA	intron (NM_178893, intron 3 of 12)	MIR3|SINE|MIR	14811	NM_178893	107684	Mm.416311	NM_178893	ENSMUSG00000028337	Coro2a	9030208C03Rik|AI563590|IR10	coronin, actin binding protein 2A	protein-coding
common_peak2-22582-18-12-0.612479433087259-0.739965416525508	chr13	67552658	67553240	+	0	NA	promoter-TSS (NM_177712)	promoter-TSS (NM_177712)	-389	NM_177712	238692	Mm.486478	NM_177712	ENSMUSG00000069206	Zfp874a	C330011K17Rik|Rslcan15|Zfp874	zinc finger protein 874a	protein-coding
common_peak1-17490-37-29-0.6191024758773-1.14508711250721	chr7	25076246	25077205	+	0	NA	exon (NM_009561, exon 7 of 7)	exon (NM_009561, exon 7 of 7)	7843	NM_009561	22719	Mm.12832	NM_009561	ENSMUSG00000050605	Zfp61	-	zinc finger protein 61	protein-coding
common_peak2-25022-20-22--0.03548717146582-0.301029995663994	chr18	24111431	24112392	+	0	NA	Intergenic	RMER5|LTR|ERV1	-1278	NM_027007	69256	Mm.218343	NM_027007	ENSMUSG00000024276	Zfp397	2810411K16Rik|6720480F11Rik|AI461664	zinc finger protein 397	protein-coding
common_peak2-28970-9-21--1.26981821223308-1.37307999835977	chr5	103910666	103911261	+	0	NA	intron (NM_011204, intron 3 of 47)	ORR1B1-int|LTR|MaLR	56752	NM_011204	19249	Mm.3414	NM_011204	ENSMUSG00000034573	Ptpn13	AI324989|PTP-BL|PTPL1|Ptpri|RIP	protein tyrosine phosphatase, non-receptor type 13	protein-coding
common_peak1-9679-10-8-0.186490343566457-1.078512453669	chr12	8864815	8865329	+	0	NA	Intergenic	Intergenic	-63041	NM_008640	17775	Mm.30071	NM_008640	ENSMUSG00000020585	Laptm4a	AA286466|LAPTM4|MTP|Mtrp|mKIAA0108	lysosomal-associated protein transmembrane 4A	protein-coding
common_peak2-28033-45-75--0.387569488098713-0.774169551378916	chr4	55532144	55533838	+	0	NA	Intergenic	Intergenic	12356	NM_010637	16600	Mm.4325	NM_010637	ENSMUSG00000003032	Klf4	EZF|Gklf|Zie	Kruppel-like factor 4 (gut)	protein-coding
common_peak2-29598-11-7-0.508693584251613-1.21681515183528	chr6	50684697	50684960	+	0	NA	Intergenic	B4A|SINE|B4	-41286	NR_045984	319981	Mm.131454	NR_045984		C530044C16Rik	-	RIKEN cDNA C530044C16 gene	ncRNA
common_peak2-30541-63-69-0.309029574125623-0.753034214639445	chr7	70357789	70359429	+	0	NA	Intergenic	Intergenic	-1197	NM_007390	11441	Mm.113464	NM_007390	ENSMUSG00000030525	Chrna7	Acra7|alpha7	cholinergic receptor, nicotinic, alpha polypeptide 7	protein-coding
common_peak2-19754-11-17--0.661231417190699-0.58239619684445	chr1	75521327	75522057	+	0	NA	exon (NM_027886, exon 4 of 25)	exon (NM_027886, exon 4 of 25)	3588	NM_027886	71728	Mm.312650	NM_027886	ENSMUSG00000026213	Stk11ip	1200014D22Rik|BB131189|LIP1|LKB1IP	serine/threonine kinase 11 interacting protein	protein-coding
unique_peak1-4647-11-9-0.186765489364251-0.344532117358383	chr3	88593735	88594424	+	0	NA	intron (NR_028359, intron 4 of 17)	intron (NR_028359, intron 4 of 17)	13100	NR_028359	100302730	Mm.482358	NR_028359		5830417I10Rik	3632445O20Rik|AA387005	gon-4-like pseudogene	pseudo
common_peak1-9075-10-7-0.356415345008769-1.12966497611638	chr11	69417664	69418246	+	0	NA	intron (NM_013415, intron 1 of 6)	intron (NM_013415, intron 1 of 6)	1507	NM_013415	11932	Mm.235204	NM_013415	ENSMUSG00000041329	Atp1b2	Amog|Atpb-2	ATPase, Na+/K+ transporting, beta 2 polypeptide	protein-coding
common_peak1-9887-9-5-0.604650905683064-1.21398586181642	chr12	85192665	85193227	+	0	NA	intron (NR_073563, intron 3 of 10)	intron (NR_073563, intron 3 of 10)	-9638	NM_010949	18222	Mm.4390	NM_010949	ENSMUSG00000021224	Numb	Nb	numb gene homolog (Drosophila)	protein-coding
unique_peak2-32776-5-4--0.0263084308932156-0.909929411522249	chr1	177703276	177703606	+	0	NA	intron (NM_029453, intron 14 of 27)	intron (NM_029453, intron 14 of 27)	74717	NM_029453	75820	Mm.50361	NM_029453	ENSMUSG00000026523	Wdr64	4930415O10Rik|4930511H01Rik	WD repeat domain 64	protein-coding
common_peak2-21298-13-5-1.19350952991661-1.95509489018123	chr11	72506227	72506631	+	0	NA	intron (NM_009671, intron 1 of 24)	intron (NM_009671, intron 1 of 24)	2925	NM_009671	11736	Mm.10313	NM_009671	ENSMUSG00000020790	Ankfy1	Ankhzn|ZFYVE14|mKIAA1255	ankyrin repeat and FYVE domain containing 1	protein-coding
unique_peak2-37823-9-7-0.18961340640422-1.05908390183068	chr5	129518409	129518896	+	0	NA	Intergenic	ID_B1|SINE|B4	-4205	NM_001286034	13852	Mm.260716	NM_007941	ENSMUSG00000029428	Stx2	AW538950|Epim|G1-536-1|Syn-2|repro34	syntaxin 2	protein-coding
unique_peak1-579-10-4-1.03448725012141-1.5150158574804	chr10	5289172	5289729	+	0	NA	intron (NM_022027, intron 3 of 16)	intron (NM_022027, intron 3 of 16)	11972	NM_022027	64009	Mm.331626	NM_022027	ENSMUSG00000019769	Syne1	8B|A330049M09Rik|BE692247|C130039F11Rik|CPG2|Myne1|mKIAA1756	spectrin repeat containing, nuclear envelope 1	protein-coding
common_peak2-26225-13-10-0.319040412000471-0.446472590016315	chr2	27331323	27331857	+	0	NA	promoter-TSS (NM_023336)	promoter-TSS (NM_023336)	-397	NM_001113574	67382	Mm.28721	NM_023336	ENSMUSG00000026918	Brd3	2410084F24Rik|AW060456|Fsrg2|ORFX|RINGL3	bromodomain containing 3	protein-coding
common_peak1-7719-12-7-0.648775985087639-0.697979855752659	chr1	88134211	88134831	+	0	NA	intron (NM_030184, intron 19 of 24)	intron (NM_030184, intron 19 of 24)	-65275	NM_145222	227327	Mm.86467	NM_145222	ENSMUSG00000079445	B3gnt7	C330001H22Rik|beta-3GnT7	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7	protein-coding
common_peak2-20363-23-55--1.08558741754852-2.60642808470051	chr10	12868958	12869720	+	0	NA	TTS (NM_029172)	TTS (NM_029172)	28490	NM_029172	75122	Mm.159433	NM_029172	ENSMUSG00000019815	Zc2hc1b	4930519B02Rik|Fam164b	zinc finger, C2HC-type containing 1B	protein-coding
common_peak2-20911-13-16--0.30899081061257-0.330004445983672	chr11	5444255	5445069	+	0	NA	Intergenic	RLTR13B1|LTR|ERVK	-2442	NM_134033	104479	Mm.210403	NM_134033	ENSMUSG00000020482	Ccdc117	1110004K02Rik|1700026O03Rik|AU018638|AU042822|AV173073|BC018601	coiled-coil domain containing 117	protein-coding
unique_peak2-35270-4-12--1.72390023199434-1.85743853830261	chr17	3335791	3336281	+	0	NA	intron (NM_001122998, intron 1 of 26)	PB1D10|SINE|Alu	9463	NM_001122998	24001	Mm.137134	NM_011878	ENSMUSG00000023800	Tiam2	3000002F19Rik|STEF|mKIAA2016	T cell lymphoma invasion and metastasis 2	protein-coding
common_peak1-13048-11-6-0.701338662194009-1.32595962126035	chr19	5816934	5817380	+	0	NA	Intergenic	RMER17C|LTR|ERVK	-14486	NR_002847	72289	Mm.298256	NR_002847	ENSMUSG00000092341	Malat1	2210401K01Rik|9430072K23Rik|AI647968|Neat2	metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)	ncRNA
common_peak1-16768-148-133-0.851164937184348-7.28113978764914	chr6	35176963	35178471	+	0	NA	exon (NM_027513, exon 30 of 43)	exon (NM_027513, exon 30 of 43)	-24982	NR_015608	67705	Mm.228046	NR_015608	ENSMUSG00000073155	1810058I24Rik	AI414869|AI848234	RIKEN cDNA 1810058I24 gene	ncRNA
unique_peak1-4048-25-7-1.86184990534511-3.43644803111449	chr2	59671545	59672685	+	0	NA	intron (NM_001290659, intron 19 of 25)	intron (NM_001290659, intron 19 of 25)	48548	NM_001159636	72137	Mm.288734	NM_028118	ENSMUSG00000026988	Wdsub1	1700048E19Rik|2610014F08Rik	WD repeat, SAM and U-box domain containing 1	protein-coding
common_peak1-18521-12-26--1.10611151707583-1.26025077975594	chr8	91801225	91801763	+	0	NA	Intergenic	B3|SINE|B2	-233433	NM_021390	58198	Mm.214361	NM_021390	ENSMUSG00000031665	Sall1	Msal-3	sal-like 1 (Drosophila)	protein-coding
unique_peak1-3743-18-3-2.31291915122835-3.35694334496952	chr19	47402332	47403205	+	0	NA	intron (NM_001164717, intron 6 of 13)	intron (NM_001164717, intron 6 of 13)	-54689	NR_105961	102466782		NR_105961		Mir6995	mmu-mir-6995	microRNA mir-6995	ncRNA
unique_peak2-36356-4-11--1.6084230145744-1.68134727924692	chr2	101985851	101986423	+	0	NA	intron (NM_178886, intron 1 of 5)	B4|SINE|B4	40480	NM_178886	241576	Mm.489740	NM_178886	ENSMUSG00000048058	Ldlrad3	6430500P08|AI194318|Lrad3	low density lipoprotein receptor class A domain containing 3	protein-coding
unique_peak2-34832-1-6--2.43441193227435-1.56314192529759	chr15	75118293	75118709	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	19650	NM_008530	17071	Mm.377095	NM_008530	ENSMUSG00000022583	Ly6f	-	lymphocyte antigen 6 complex, locus F	protein-coding
common_peak2-27979-6-11--1.01956439034085-1.32595962126035	chr4	43442282	43442734	+	0	NA	promoter-TSS (NM_177377)	promoter-TSS (NM_177377)	-502	NM_001162381	329831	Mm.454466	NM_177377	ENSMUSG00000042788	Fam166b	4833436C18Rik	family with sequence similarity 166, member B	protein-coding
unique_peak1-5582-9-2-1.60465090568306-1.87199725847353	chr5	150457522	150458041	+	0	NA	Intergenic	ORSL|DNA|Tip100	-18891	NM_013559	15505	Mm.270681	NM_013559	ENSMUSG00000029657	Hsph1	105kDa|AI790491|Hsp105|Hsp110|hsp-E7I	heat shock 105kDa/110kDa protein 1	protein-coding
common_peak2-29455-27-30-0.0373496405083609-0.315041925765932	chr6	24707571	24708245	+	0	NA	intron (NM_029848, intron 3 of 4)	intron (NM_029848, intron 3 of 4)	9541	NM_029848	77042	Mm.66017	NM_029848		Hyal4	4632428M18Rik|CSHY	hyaluronoglucosaminidase 4	protein-coding
common_peak1-7808-19-20-0.0103699038829257-0.306326795069978	chr1	119648378	119649160	+	0	NA	Intergenic	Intergenic	558940	NM_011650	22099	Mm.426637	NM_011650	ENSMUSG00000026374	Tsn	2610034C24Rik|AU040286|C3PO|TB-RBP	translin	protein-coding
common_peak2-27219-69-102--0.0913580799244862-0.328312670805966	chr3	51276332	51278168	+	0	NA	3' UTR (NM_053089, exon 20 of 20)	3' UTR (NM_053089, exon 20 of 20)	-10638	NM_016858	19338	Mm.1664	NM_016858	ENSMUSG00000027739	Rab33b	-	RAB33B, member RAS oncogene family	protein-coding
common_peak2-23893-19-23--0.18227517405947-0.320777457303847	chr16	3884016	3885167	+	0	NA	promoter-TSS (NM_029090)	promoter-TSS (NM_029090)	-28	NM_029090	74763	Mm.28403	NM_029090	ENSMUSG00000005982	Naa60	1200013P24Rik|AI315146|Nat15	N(alpha)-acetyltransferase 60, NatF catalytic subunit	protein-coding
common_peak2-23526-20-21-0.0286431659538957-0.306080386793804	chr15	77335832	77336701	+	0	NA	Intergenic	CT-rich|Low_complexity|Low_complexity	-2435	NM_001177533	626615	Mm.390820	NM_001177533	ENSMUSG00000091650	Apol11a	EG626615	apolipoprotein L 11a	protein-coding
common_peak2-21134-31-35-0.0553136693708112-0.313095283157747	chr11	54521846	54522739	+	0	NA	Intergenic	Intergenic	78913	NM_178626	72729	Mm.29476	NM_178626	ENSMUSG00000052298	Cdc42se2	2810404F18Rik|AA408783|AA536669|SPEC2	CDC42 small effector 2	protein-coding
common_peak1-11736-14-22--0.624345795699369-0.590343908676233	chr16	33829674	33830383	+	0	NA	5' UTR (NM_001145884, exon 1 of 15)	5' UTR (NM_001145884, exon 1 of 15)	277	NM_001145884	16419	Mm.6424	NM_010580	ENSMUSG00000022817	Itgb5	AA475909|AI874634|ESTM23|[b]-5|[b]5|[b]5A|[b]5B|beta-5|beta5	integrin beta 5	protein-coding
common_peak2-31140-20-30--0.466121525795682-0.569352520859861	chr8	35494789	35495567	+	0	NA	Intergenic	Lx8|LINE|L1	208192	NR_040706	330734	Mm.149998	NR_040706		B930018H19Rik	B930018H19	RIKEN cDNA B930018H19 gene	ncRNA
unique_peak2-35524-1-10--3.08648862885404-2.57096726280955	chr17	50698467	50698745	+	0	NA	intron (NM_013880, intron 1 of 5)	intron (NM_013880, intron 1 of 5)	49734	NM_013880	224860	Mm.217362	NM_013880	ENSMUSG00000038910	Plcl2	PLC-L2|PRIP-2|Plce2|mKIAA1092	phospholipase C-like 2	protein-coding
common_peak1-13153-24-20-0.400892479988956-0.591915184368645	chr19	10304461	10305368	+	0	NA	intron (NM_001033481, intron 1 of 25)	intron (NM_001033481, intron 1 of 25)	10324	NM_001033481	225908	Mm.329716	NM_001033481	ENSMUSG00000036098	Myrf	6030439E18|Gm1804|Gm98|Mrf	myelin regulatory factor	protein-coding
common_peak2-27759-37-57--0.331987923641753-0.556612435105728	chr3	129533358	129534646	+	0	NA	intron (NM_026578, intron 1 of 6)	CpG	312	NM_026578	68147	Mm.24873	NM_026578	ENSMUSG00000028010	Gar1	AA409823|AI326794|C430047J18Rik|Nola1	GAR1 ribonucleoprotein homolog (yeast)	protein-coding
common_peak1-8036-16-16-0.0308008010177225-0.307611222530525	chr1	171246480	171247143	+	0	NA	Intergenic	Intergenic	214784	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
common_peak2-31245-14-17--0.270708841084668-0.328191099940267	chr8	70523285	70523896	+	0	NA	Intergenic	Intergenic	-25117	NM_177698	234353	Mm.32525	NM_027626	ENSMUSG00000030465	Psd3	4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D	pleckstrin and Sec7 domain containing 3	protein-coding
unique_peak1-2942-11-4-1.18676548936425-1.68134727924692	chr17	65667442	65668214	+	0	NA	intron (NM_001289485, intron 14 of 15)	intron (NM_001289485, intron 14 of 15)	222294	NM_001008973	381107	Mm.141275	NM_001008973	ENSMUSG00000045036	Tmem232	E130009J12Rik|Gm940|Tes13-L|Tes13-S	transmembrane protein 232	protein-coding
unique_peak1-3732-16-7-1.11826364226806-1.23399803405144	chr19	46807204	46807870	+	0	NA	intron (NM_020577, intron 10 of 10)	intron (NM_020577, intron 10 of 10)	25604	NM_020577	57344	Mm.28566	NM_020577	ENSMUSG00000003559	As3mt	2310045H08Rik|Cyt19	arsenic (+3 oxidation state) methyltransferase	protein-coding
common_peak1-13778-9-17--0.980311595038092-0.844317084070804	chr2	37430433	37431040	+	0	NA	3' UTR (NM_009261, exon 17 of 17)	3' UTR (NM_009261, exon 17 of 17)	58590	NM_177383	338346	Mm.445325	NM_177383		Gpr21	C230004C13Rik	G protein-coupled receptor 21	protein-coding
common_peak2-29258-12-29--1.25811461052088-1.65862513589797	chr5	140603754	140604584	+	0	NA	intron (NM_010752, intron 13 of 17)	intron (NM_010752, intron 13 of 17)	193337	NM_010752	17120	Mm.27250	NM_010752	ENSMUSG00000029554	Mad1l1	AI173502|AW550425|Mad1	MAD1 mitotic arrest deficient 1-like 1	protein-coding
common_peak2-25561-34-11-1.79710602628011-4.50078841046546	chr19	6475206	6475799	+	0	NA	intron (NM_001205234, intron 9 of 22)	intron (NM_001205234, intron 9 of 22)	56764	NM_001205234	18190	Mm.329616	NM_020253	ENSMUSG00000033768	Nrxn2	6430591O13Rik|mKIAA0921	neurexin II	protein-coding
common_peak2-30051-10-18--0.891512168434816-0.804350088532826	chr6	128143131	128143576	+	0	NA	Intergenic	PB1D10|SINE|Alu	-9532	NR_077223	330427	Mm.426356	NR_077223		9330102E08Rik	-	RIKEN cDNA 9330102E08 gene	ncRNA
unique_peak1-6309-16-0-4.11826364226806-5.41853992195166	chr7	42953596	42954084	+	0	NA	Intergenic	Intergenic	3566064	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak2-27096-11-25--1.19174613388948-1.51503956548638	chr3	131530466	131531160	+	0	NA	Intergenic	Intergenic	-217443	NM_020265	56811	Mm.103593	NM_020265	ENSMUSG00000028031	Dkk2	-	dickkopf homolog 2 (Xenopus laevis)	protein-coding
unique_peak2-39631-2-6--1.72480917832092-1.26211192963361	chr9	98783846	98784272	+	0	NA	Intergenic	Intergenic	18873	NM_028033	71979	Mm.140843	NM_028033	ENSMUSG00000090470	2410012M07Rik	-	RIKEN cDNA 2410012M07 gene	protein-coding
unique_peak2-32922-7-10--0.660340788339108-1.12966497611638	chr10	24711757	24712211	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-64708	NM_007482	11846	Mm.154144	NM_007482	ENSMUSG00000019987	Arg1	AI|AI256583|Arg-1|PGIF	arginase, liver	protein-coding
common_peak1-7739-10-4-1.03448725012141-1.5150158574804	chr1	89120179	89120663	+	0	NA	intron (NM_001039169, intron 3 of 6)	B3|SINE|B2	9907	NM_001039169	26987	Mm.227183	NM_023314	ENSMUSG00000026254	Eif4e2	2700069E09Rik|AI036339|AV129531|D0H0S6743E|Eif4el3	eukaryotic translation initiation factor 4E member 2	protein-coding
common_peak2-21288-29-45--0.411271875441902-0.573175361577109	chr11	70653520	70654657	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-4175	NM_001291143	54189	Mm.7087	NM_019400	ENSMUSG00000020817	Rabep1	Rab5ep|rabaptin-5|rabaptin-5alpha	rabaptin, RAB GTPase binding effector protein 1	protein-coding
common_peak2-31108-16-7-1.11826364226806-1.23399803405144	chr8	32199875	32200417	+	0	NA	promoter-TSS (NM_025869)	promoter-TSS (NM_025869)	12	NM_025869	66959	Mm.23916	NM_025869	ENSMUSG00000039661	Dusp26	2310043K02Rik|Skrp3	dual specificity phosphatase 26 (putative)	protein-coding
unique_peak1-2224-8-3-1.00522241794757-1.39487600375387	chr15	74764666	74765222	+	0	NA	Intergenic	Intergenic	-20537	NM_001164039	17069	Mm.788	NM_008529	ENSMUSG00000022587	Ly6e	9804|Ly67|RIG-E|Sca-2|TSA-1|Tsa1	lymphocyte antigen 6 complex, locus E	protein-coding
unique_peak1-1030-7-1-1.79909083029819-1.80617997398389	chr11	76277529	76278012	+	0	NA	exon (NM_198018, exon 6 of 22)	exon (NM_198018, exon 6 of 22)	4197	NM_001291186	109934	Mm.258939	NM_198018	ENSMUSG00000017631	Abr	-	active BCR-related gene	protein-coding
unique_peak2-36839-20-37--0.759852728852392-1.13829382151971	chr3	88774533	88775900	+	0	NA	intron (NM_138679, intron 1 of 26)	L1_Mur3|LINE|L1	5482	NM_138679	192195	Mm.130752	NM_138679	ENSMUSG00000028053	Ash1l	8030453L17Rik|Ash1|E430018P19Rik|Kmt2h	ash1 (absent, small, or homeotic)-like (Drosophila)	protein-coding
common_peak1-9649-8-9--0.316705676939792-1.03275496310833	chr12	86801987	86802513	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-12601	NM_010234	14281	Mm.246513	NM_010234	ENSMUSG00000021250	Fos	D12Rfj1|c-fos|cFos	FBJ osteosarcoma oncogene	protein-coding
unique_peak2-35057-5-7--0.704380336005853-1.01466476204226	chr16	11322107	11322542	+	0	NA	promoter-TSS (NM_028964)	promoter-TSS (NM_028964)	-673	NM_028964	74478	Mm.325831	NM_028964	ENSMUSG00000071669	Snx29	4933437K13Rik|ENSMUSG00000079738|Gm11170|Gm1737|Gm930|Rundc2a	sorting nexin 29	protein-coding
common_peak1-15709-16-8-0.948338640825749-1.02063122982878	chr4	140657626	140658414	+	0	NA	intron (NM_177867, intron 7 of 14)	B3|SINE|B2	13760	NM_177867	329972	Mm.247201	NM_177867	ENSMUSG00000045004	Spata21	4933414G08	spermatogenesis associated 21	protein-coding
unique_peak2-36236-16-26--0.636623859895407-0.713114929964887	chr2	38512894	38513879	+	0	NA	Intergenic	ID_B1|SINE|B4	-13960	NM_011187	19177	Mm.389251	NM_011187	ENSMUSG00000026750	Psmb7	AU020723|MC14	proteasome (prosome, macropain) subunit, beta type 7	protein-coding
common_peak1-15857-29-79--1.20963801427225-4.0862182132045	chr5	3802444	3803906	+	0	NA	promoter-TSS (NM_030675)	promoter-TSS (NM_030675)	-6	NR_033173	79264	Mm.32368	NM_030675	ENSMUSG00000000600	Krit1	2010007K12Rik|A630036P20Rik|AA432855|AI450393|AI643869|BB155247|BB235701|Ccm1	KRIT1, ankyrin repeat containing	protein-coding
common_peak2-29765-10-7-0.356415345008769-1.12966497611638	chr6	87237451	87237836	+	0	NA	intron (NM_054041, intron 5 of 17)	intron (NM_054041, intron 5 of 17)	48126	NM_054041	69538	Mm.232525	NM_054041	ENSMUSG00000033420	Antxr1	2310008J16Rik|2810405N18Rik|Antrx1|Tem8	anthrax toxin receptor 1	protein-coding
common_peak1-15398-20-46--1.06651406708644-2.18062287223157	chr4	82506202	82507168	+	0	NA	Intergenic	Intergenic	-1120	NM_026647	68268	Mm.32047	NM_026647	ENSMUSG00000028403	Zdhhc21	9130404H11Rik|AL024349|D130004H04Rik|dep	zinc finger, DHHC domain containing 21	protein-coding
unique_peak2-35984-20-20-0.0957573618124323-0.321718508207528	chr19	25267211	25268275	+	0	NA	intron (NM_028785, intron 45 of 47)	intron (NM_028785, intron 45 of 47)	-43949	NM_181404	107351	Mm.260722	NM_181404	ENSMUSG00000032702	Kank1	A930031B09Rik|AU015049|AW121052|Ankrd15|D330024H06Rik|mKIAA0172	KN motif and ankyrin repeat domains 1	protein-coding
common_peak1-14159-108-71-1.20025195996576-8.66106982576717	chr2	136677540	136680203	+	0	NA	Intergenic	MER21B|LTR|ERV1	-38083	NM_028201	74243	Mm.330612	NM_028201	ENSMUSG00000027281	Slx4ip	2210009G21Rik|2410004I22Rik|C85661|Slxip	SLX4 interacting protein	protein-coding
common_peak1-19332-8-9--0.316705676939792-1.03275496310833	chrX	10715030	10715480	+	0	NA	Intergenic	Intergenic	-161128	NM_001111037	100042922	Mm.374311	NM_001111037	ENSMUSG00000095208	Gm14483	OTTMUSG00000016789	predicted gene 14483	protein-coding
common_peak1-18741-12-25--1.05166373305345-1.1381569562463	chr8	124644041	124644579	+	0	NA	Intergenic	(TTTC)n|Simple_repeat|Simple_repeat	142386	NR_106096	102466915		NR_106096		Mir7237	mmu-mir-7237	microRNA mir-7237	ncRNA
unique_peak1-2583-9-6-0.382258484346616-1.11707584880836	chr16	30503522	30504017	+	0	NA	Intergenic	Intergenic	46895	NM_172614	224090	Mm.241459	NM_172614		Tmem44	1700007N03Rik|9330161C17Rik|B230220N21	transmembrane protein 44	protein-coding
common_peak1-15131-64-175--0.993985216928694-6.66969067180107	chr3	142394150	142396029	+	0	NA	intron (NM_173763, intron 10 of 13)	intron (NM_173763, intron 10 of 13)	31077	NM_001293560	229905	Mm.289643	NM_173763	ENSMUSG00000040213	Ccbl2	KATIII|Kat3	cysteine conjugate-beta lyase 2	protein-coding
unique_peak2-39561-8-9--0.316705676939792-1.03275496310833	chr9	70841344	70841776	+	0	NA	Intergenic	Intergenic	-58945	NM_008280	15450	Mm.390187	NM_008280	ENSMUSG00000032207	Lipc	AI256194|HL|Hpl	lipase, hepatic	protein-coding
unique_peak1-3038-8-3-1.00522241794757-1.39487600375387	chr18	4801995	4802464	+	0	NA	Intergenic	RMER5|LTR|ERV1	-10255	NR_045881	100038439	Mm.387569	NR_045881	ENSMUSG00000097043	Gm10556	ENSMUSG00000073646	predicted gene 10556	ncRNA
common_peak1-12884-52-115--0.749721004861873-2.82490866561777	chr18	79109091	79110724	+	0	NA	intron (NM_053099, intron 3 of 5)	intron (NM_053099, intron 3 of 5)	196223	NM_053099	240427	Mm.312871	NM_053099	ENSMUSG00000024548	Setbp1	C130092E12|Seb|mKIAA0437	SET binding protein 1	protein-coding
common_peak1-15986-38-25-0.871012941157439-1.90173050117047	chr5	32349218	32350887	+	0	NA	intron (NM_181281, intron 9 of 10)	L1_Mus1|LINE|L1	-88793	NM_008037	14284	Mm.24684	NM_008037	ENSMUSG00000029135	Fosl2	Fra-2	fos-like antigen 2	protein-coding
common_peak2-28845-5-6--0.511735258063458-0.947717972411649	chr5	72636515	72636889	+	0	NA	intron (NR_003966, intron 5 of 22)	intron (NR_003966, intron 5 of 22)	42120	NM_153389	231287	Mm.32775	NM_153389	ENSMUSG00000046808	Atp10d	9830145H18Rik|ATPVD|D5Buc24e	ATPase, class V, type 10D	protein-coding
unique_peak1-620-9-3-1.18961340640422-1.57096726280955	chr10	24396832	24397339	+	0	NA	intron (NM_008813, intron 3 of 24)	RMER16-int|LTR|ERVK	34823	NM_008813	18605	Mm.27254	NM_008813	ENSMUSG00000037370	Enpp1	4833416E15Rik|AI428932|C76301|CD203c|E-NPP1|Ly-41|M6S1|NPP1|Npps|PC-1|Pca|Pca-1|Pdnp1|ttw|twy	ectonucleotide pyrophosphatase/phosphodiesterase 1	protein-coding
unique_peak1-7361-9-4-0.867685311516858-1.36011389749466	chrX	36391600	36392159	+	0	NA	Intergenic	Intergenic	265922	NM_183126	77883	Mm.113311	NM_183126	ENSMUSG00000051361	6030498E09Rik	-	RIKEN cDNA 6030498E09 gene	protein-coding
common_peak2-30251-17-19--0.103631756682325-0.301029995663974	chr7	12421917	12422793	+	0	NA	Intergenic	Intergenic	-9769	NM_134206	171240	Mm.377196	NM_134206	ENSMUSG00000047655	Vmn1r74	V1rg5	vomeronasal 1 receptor 74	protein-coding
unique_peak1-7008-13-4-1.45654393575041-2.23384849113406	chr8	123213007	123213569	+	0	NA	Intergenic	MTC|LTR|MaLR	21068	NM_001293559	12857	Mm.386758	NM_009941	ENSMUSG00000031818	Cox4i1	AL024441|COX|COX IV-1|COXIV|Cox4|Cox4a|IV-1	cytochrome c oxidase subunit IV isoform 1	protein-coding
common_peak1-10455-13-11-0.193509529916613-0.379391706698377	chr13	108229659	108230278	+	0	NA	Intergenic	Intergenic	-29934	NR_045083	105120	Mm.417700	NR_045083		AI197445	-	expressed sequence AI197445	ncRNA
common_peak2-29633-7-6--0.00826409175941478-0.97990265578305	chr6	56923408	56923853	+	0	NA	Intergenic	Intergenic	-11706	NM_134174	171192	Mm.377172	NM_134174	ENSMUSG00000090346	Vmn1r5	V1rc19	vomeronasal 1 receptor 5	protein-coding
unique_peak2-34195-2-5--1.50241675698448-1.08602067057793	chr13	38151674	38152058	+	0	NA	exon (NM_024242, exon 16 of 17)	exon (NM_024242, exon 16 of 17)	23008	NM_024242	71340	Mm.297130	NM_024242	ENSMUSG00000021428	Riok1	3110046C13Rik|5430416A05Rik|Ad034	RIO kinase 1 (yeast)	protein-coding
unique_peak2-32620-0-6--3.64748585253182-1.56314192529759	chr1	116448056	116448435	+	0	NA	Intergenic	L1M3|LINE|L1	-1133469	NM_001077425	636808	Mm.101576	NM_001077425	ENSMUSG00000070695	Cntnap5a	Caspr5-1|EG636808	contactin associated protein-like 5A	protein-coding
common_peak1-11360-47-88--0.54089200619985-1.36934044104	chr15	89429255	89430386	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-7466	NM_026817	68708	Mm.23258	NM_026817	ENSMUSG00000022621	Rabl2	1110031N17Rik|AW549303|Rabl2a	RAB, member RAS oncogene family-like 2	protein-coding
common_peak2-21496-61-46-0.828160478071703-2.638168732281	chr11	88995737	88997336	+	0	NA	Intergenic	MLT1H1|LTR|MaLR	61381	NM_001033266	217071	Mm.342127	NM_001033266	ENSMUSG00000072553	Gm525	-	predicted gene 525	protein-coding
unique_peak1-1744-8-7-0.00522241794757061-1.00793137938329	chr13	102894766	102895291	+	0	NA	Intergenic	Lx9|LINE|L1	-356856	NM_001077495	18708	Mm.259333	NM_001024955	ENSMUSG00000041417	Pik3r1	PI3K|p50alpha|p55alpha|p85alpha	phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)	protein-coding
common_peak1-13275-15-5-1.4272022498345-1.61682445937017	chr19	37380385	37381000	+	0	NA	intron (NM_031156, intron 10 of 23)	intron (NM_031156, intron 10 of 23)	24411	NM_031156	15925	Mm.28366	NM_031156	ENSMUSG00000056999	Ide	1300012G03Rik|4833415K22Rik|AA675336|AI507533	insulin degrading enzyme	protein-coding
common_peak1-12173-112-148-0.214081779858121-0.72425292157326	chr17	30003637	30005724	+	0	NA	intron (NM_001081160, intron 1 of 15)	intron (NM_001081160, intron 1 of 15)	20147	NM_001081160	74762	Mm.40901	NM_001081160	ENSMUSG00000043557	Mdga1	1200011I03Rik|GPIM|Mamdc3	MAM domain containing glycosylphosphatidylinositol anchor 1	protein-coding
unique_peak2-38723-5-15--1.70438033600585-1.4372489031793	chr7	112204841	112205567	+	0	NA	exon (NM_146358, exon 1 of 1)	exon (NM_146358, exon 1 of 1)	442	NM_146358	258355	Mm.377452	NM_146358	ENSMUSG00000073914	Olfr677	MOR32-11	olfactory receptor 677	protein-coding
unique_peak2-33516-14-16--0.188246680892695-0.308035960714963	chr11	75403898	75404538	+	0	NA	intron (NM_008850, intron 1 of 10)	intron (NM_008850, intron 1 of 10)	2608	NM_008850	18738	Mm.3128	NM_008850	ENSMUSG00000017781	Pitpna	Pitpn|vb|vibrator	phosphatidylinositol transfer protein, alpha	protein-coding
unique_peak1-5569-8-5-0.420259917226415-1.10484139239135	chr5	147310258	147310794	+	0	NA	Intergenic	Intergenic	-3427	NM_001243114	100041578	Mm.464400	NM_001243114	ENSMUSG00000095557	Gm3415	-	predicted gene 3415	protein-coding
common_peak2-27461-21-22-0.0459273092092225-0.319918318021793	chr3	90574625	90575323	+	0	NA	Intergenic	L1Md_F2|LINE|L1	44146	NM_207263	384997	Mm.316644	NM_207263	ENSMUSG00000042250	Pglyrp4	Gm1478|Gm413	peptidoglycan recognition protein 4	protein-coding
unique_peak1-2606-11-0-3.50869358425161-3.61235994796777	chr16	33584231	33584796	+	0	NA	intron (NM_134251, intron 4 of 12)	intron (NM_134251, intron 4 of 12)	65832	NM_001083902	171286	Mm.35253	NM_134251	ENSMUSG00000035506	Slc12a8	CCC9|E330020C02Rik	solute carrier family 12 (potassium/chloride transporters), member 8	protein-coding
unique_peak1-3562-26-4-2.6059709972711-5.18764427570439	chr19	27133845	27134855	+	0	NA	Intergenic	Intergenic	-157160	NM_013703	22359	Mm.4141	NM_013703	ENSMUSG00000024924	Vldlr	AA408956|AI451093|AW047288	very low density lipoprotein receptor	protein-coding
common_peak1-8748-34-17-1.21214352555895-2.67563291309484	chr11	4302054	4303299	+	0	NA	intron (NM_029458, intron 10 of 10)	intron (NM_029458, intron 10 of 10)	38409	NM_029458	75828	Mm.159592	NM_029458	ENSMUSG00000020419	Hormad2	4930529M09Rik	HORMA domain containing 2	protein-coding
common_peak2-31930-7-9--0.522837264589173-1.05908390183068	chr9	63706816	63707335	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	-101274	NM_016769	17127	Mm.7320	NM_016769	ENSMUSG00000032402	Smad3	AU022421|Madh3	SMAD family member 3	protein-coding
common_peak1-17661-7-23--1.78587167042297-2.25371873249797	chr7	64127238	64127737	+	0	NA	intron (NM_008074, intron 5 of 9)	intron (NM_008074, intron 5 of 9)	514754	NM_008074	14407	Mm.434343	NM_008074		Gabrg3	B230362M20Rik|Gabrg-3	gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3	protein-coding
common_peak2-27942-33-62--0.645942360974388-1.33955643568472	chr4	31963464	31964724	+	0	NA	Intergenic	MIRb|SINE|MIR	-86988	NM_009316	26409	Mm.258589	NM_009316	ENSMUSG00000028284	Map3k7	B430101B05|C87327|Tak1	mitogen-activated protein kinase kinase kinase 7	protein-coding
common_peak2-24377-5-5--0.289342836727009-0.909929411522249	chr17	10501151	10501576	+	0	NA	intron (NM_021881, intron 1 of 6)	B1F1|SINE|Alu	10863	NM_021881	19317	Mm.130694	NM_021881	ENSMUSG00000062078	Qk	1110003F05Rik|1500005P18|QkI|l(17)-1Wis|l17Wis1	quaking	protein-coding
unique_peak1-3163-11-7-0.508693584251613-1.21681515183528	chr18	38184901	38185410	+	0	NA	Intergenic	Intergenic	-26532	NM_001205336	106952	Mm.247642	NM_139206	ENSMUSG00000024451	Arap3	Centd3|Drag1|E030006K04Rik|cnt-d3	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3	protein-coding
common_peak2-29118-12-14--0.25811461052088-0.309074325783021	chr5	123720389	123721111	+	0	NA	Intergenic	Intergenic	42551	NM_026000	67151	Mm.278997	NM_026000	ENSMUSG00000029440	Psmd9	1500011J20Rik|2610202L11Rik|Bridge-1|P27	proteasome (prosome, macropain) 26S subunit, non-ATPase, 9	protein-coding
common_peak1-16601-12-54--2.13258372843702-6.15355453462454	chr5	149677923	149678749	+	0	NA	Intergenic	Intergenic	61887	NM_153572	231912	Mm.397405	NM_153572		Katnal1	-	katanin p60 subunit A-like 1	protein-coding
common_peak1-12906-48-89--0.52092594509486-1.27152917595657	chr18	84086988	84088391	+	0	NA	Intergenic	Intergenic	168265	NM_001081300	110796	Mm.102136	NM_001081300	ENSMUSG00000046982	Tshz1	5730407I04Rik|D18Bwg1409e|Mtsh1|NY-CO-33|Sdccag33|Tsh1|mKIAA4206|teashirt1	teashirt zinc finger family member 1	protein-coding
common_peak2-28345-13-7-0.778472030637769-0.817533494790411	chr4	135521481	135521893	+	0	NA	intron (NM_178389, intron 2 of 9)	B2_Mm1t|SINE|B2	607	NM_178389	74246	Mm.247946	NM_178389	ENSMUSG00000028671	Gale	2310002A12Rik|AI323962	galactose-4-epimerase, UDP	protein-coding
unique_peak2-37090-0-7--3.84013093047421-1.80617997398389	chr3	152486319	152486713	+	0	NA	intron (NM_012028, intron 4 of 4)	ORR1B1|LTR|MaLR	109452	NM_025662	329777	Mm.331447	NM_025662	ENSMUSG00000039047	Pigk	3000001O05Rik	phosphatidylinositol glycan anchor biosynthesis, class K	protein-coding
unique_peak2-36450-0-5--3.42509343119537-1.32905871926422	chr2	136921143	136921413	+	0	NA	exon (NM_013822, exon 7 of 26)	exon (NM_013822, exon 7 of 26)	20978	NM_013822	16449	Mm.22398	NM_013822	ENSMUSG00000027276	Jag1	ABE2|Gsfabe2|Htu|Ozz|Ser-1	jagged 1	protein-coding
common_peak1-9629-18-23--0.272043349492805-0.34651636097721	chr12	8207838	8208543	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-6723	NM_172401	68832	Mm.25608	NM_172401	ENSMUSG00000037669	1110057K04Rik	LDAH	RIKEN cDNA 1110057K04 gene	protein-coding
unique_peak2-40005-16-49--1.52559254750666-3.81634954855125	chrX	170008652	170009965	+	0	NA	Intergenic	Intergenic	-3592459	NR_029457	654820	Mm.34441	NM_001039559	ENSMUSG00000072844	G530011O06Rik	-	RIKEN cDNA G530011O06 gene	ncRNA
unique_peak2-36319-2-8--2.08737925770563-1.65811743852845	chr2	79634736	79635068	+	0	NA	intron (NM_001290743, intron 4 of 4)	MMAR1|DNA|Mariner	86965	NM_001290743	75276	Mm.257373	NM_172420	ENSMUSG00000034683	Ppp1r1c	4930565M23Rik|4930579P15Rik	protein phosphatase 1, regulatory (inhibitor) subunit 1C	protein-coding
common_peak1-8129-38-35-0.401527657856218-0.7449989148481	chr1	187215020	187216085	+	0	NA	intron (NM_029735, intron 12 of 31)	intron (NM_029735, intron 12 of 31)	28578	NM_029735	107508	Mm.154511	NM_029735	ENSMUSG00000026615	Eprs	2410081F06Rik|3010002K18Rik|C79379|Qprs	glutamyl-prolyl-tRNA synthetase	protein-coding
unique_peak2-34569-7-6--0.00826409175941478-0.97990265578305	chr14	66106882	66107403	+	0	NA	Intergenic	Intergenic	-62833	NM_010932	18155	Mm.16347	NM_010932	ENSMUSG00000045731	Pnoc	N/OFQ|N23K|Npnc1|OFQ/N	prepronociceptin	protein-coding
common_peak1-15970-41-31-0.70114870484866-1.46742434643227	chr5	31601996	31603189	+	0	NA	intron (NM_144909, intron 5 of 18)	B2_Mm2|SINE|B2	2638	NM_144909	231103	Mm.100043	NM_144909	ENSMUSG00000059434	Gckr	GKRP	glucokinase regulatory protein	protein-coding
unique_peak1-3342-12-6-0.841421063030034-1.58711810488664	chr19	47578529	47579198	+	0	NA	intron (NM_175360, intron 9 of 9)	RLTR18|LTR|ERVK	-8609	NR_045322	100503104	Mm.442735	NR_045322	ENSMUSG00000097990	Gm19557	-	predicted gene, 19557	ncRNA
unique_peak1-237-9-0-3.18961340640422-3.01029995663981	chr1	90228407	90228889	+	0	NA	intron (NM_134252, intron 8 of 26)	B2_Mm2|SINE|B2	25361	NM_134252	171382	Mm.218753	NM_134252	ENSMUSG00000036251	Trpm8	CMR1|LTRPC6|LTrpC-6|TRPP8|Trp-p8	transient receptor potential cation channel, subfamily M, member 8	protein-coding
unique_peak2-37597-3-7--1.41398308995928-1.23214870625617	chr5	53042309	53042737	+	0	NA	intron (NM_172490, intron 8 of 10)	intron (NM_172490, intron 8 of 10)	18417	NM_172490	211006	Mm.244719	NM_172490		Sepsecs	9130208G10|AA986712|D5Ertd135e|SLA|SecS	Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase	protein-coding
unique_peak2-36023-7-8--0.370834171144123-1.00793137938329	chr19	42045442	42045868	+	0	NA	intron (NM_028152, intron 1 of 30)	L1MD3|LINE|L1	9971	NM_028152	72199	Mm.218940	NM_028152	ENSMUSG00000025159	Mms19	2410001K24Rik|2610042O15Rik|AI316855|C79368|C86341|Mms19l	MMS19 (MET18 S. cerevisiae)	protein-coding
unique_peak2-36147-10-12--0.344024373132323-0.340565874754526	chr2	20966881	20967484	+	0	NA	Intergenic	CT-rich|Low_complexity|Low_complexity	76681	NR_033225	433408	Mm.386941	NR_033225		Gm13375	OTTMUSG00000011664	predicted gene 13375	ncRNA
common_peak2-22798-18-19--0.00900894365901106-0.306598483909153	chr14	8172417	8172973	+	0	NA	Intergenic	Intergenic	-7786	NM_001025085	545013	Mm.422841	NM_001025085	ENSMUSG00000072726	Gm5797	EG545013	predicted gene 5797	protein-coding
common_peak1-15676-11-21--0.950738034385684-0.991115276827166	chr4	137388549	137389152	+	0	NA	Intergenic	Intergenic	-29302	NM_199307	230857	Mm.401062	NM_199307	ENSMUSG00000057530	Ece1	AW322500|ECE-1|ECE-1a|ECE-1b|ECE-1d	endothelin converting enzyme 1	protein-coding
common_peak1-18859-14-10-0.439784541720347-0.519648556297791	chr9	21181534	21182147	+	0	NA	intron (NM_001277322, intron 2 of 21)	B1_Mur1|SINE|Alu	8864	NM_001277322	16201	Mm.440026	NM_010561	ENSMUSG00000032178	Ilf3	MBII-26|MPHOSPH4|NF90|NFAR	interleukin enhancer binding factor 3	protein-coding
common_peak2-26219-52-70--0.0414871292389831-0.302592219506763	chr2	26910447	26911554	+	0	NA	Intergenic	Intergenic	12388	NM_001159602	66139	Mm.330087	NM_025376	ENSMUSG00000009214	Tmem8c	1110002H13Rik|AI131587	transmembrane protein 8C	protein-coding
common_peak2-24652-5-4--0.0263084308932156-0.909929411522249	chr17	35634446	35634857	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	-8326	NM_013633	18999	Mm.17031	NM_013633	ENSMUSG00000024406	Pou5f1	NF-A3|Oct-3|Oct-3/4|Oct-4|Oct3|Oct3/4|Oct4|Otf-3|Otf-4|Otf3|Otf3-rs7|Otf3g|Otf4	POU domain, class 5, transcription factor 1	protein-coding
common_peak2-23816-9-11--0.395349094316936-0.344532117358383	chr15	101233217	101233717	+	0	NA	Intergenic	Intergenic	-9367	NM_033073	110310	Mm.486285	NM_033073		Krt7	D15Wsu77e|K7|Krt2-7	keratin 7	protein-coding
common_peak1-7581-17-18--0.0296311752385474-0.306899554715732	chr1	52817191	52817974	+	0	NA	Intergenic	Intergenic	-33420	NM_133829	98682	Mm.491173	NM_133829	ENSMUSG00000041439	Mfsd6	2210010L05Rik|9630025I22Rik|AI836200|AW212394|MMR2	major facilitator superfamily domain containing 6	protein-coding
common_peak2-23638-22-25--0.0531556130536872-0.301029995663976	chr15	83474303	83475384	+	0	NA	intron (NM_001271473, intron 4 of 19)	intron (NM_001271473, intron 4 of 19)	-49256	NM_183017	223723	Mm.46778	NM_183017	ENSMUSG00000016757	Ttll12	BC055368|D430005B17	tubulin tyrosine ligase-like family, member 12	protein-coding
common_peak1-15453-29-48--0.502419763500098-0.744998914848106	chr4	98382613	98383426	+	0	NA	intron (NM_007704, intron 17 of 17)	intron (NM_007704, intron 17 of 17)	-10426	NM_001081202	381591	Mm.34340	NM_001081202	ENSMUSG00000087166	L1td1	AA546746|AB211064|D76865|ECAT11	LINE-1 type transposase domain containing 1	protein-coding
common_peak1-14776-53-77--0.14442920644632-0.353864072814984	chr3	88830753	88832040	+	0	NA	intron (NM_138679, intron 6 of 26)	ID_B1|SINE|B4	61662	NM_138679	192195	Mm.130752	NM_138679	ENSMUSG00000028053	Ash1l	8030453L17Rik|Ash1|E430018P19Rik|Kmt2h	ash1 (absent, small, or homeotic)-like (Drosophila)	protein-coding
common_peak1-9736-7-9--0.522837264589173-1.05908390183068	chr12	41950048	41950367	+	0	NA	intron (NM_053122, intron 4 of 6)	intron (NM_053122, intron 4 of 6)	199530	NM_053122	93757	Mm.363813	NM_053122	ENSMUSG00000056899	Immp2l	AI853880|IMP2	IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)	protein-coding
common_peak2-28463-23-22-0.198205548452068-0.373496418836697	chr4	152177438	152178244	+	0	NA	Intergenic	GA-rich|Low_complexity|Low_complexity	106192	NR_033138	330004	Mm.291863	NM_001033414		Gm833	-	predicted gene 833	ncRNA
common_peak2-30160-7-8--0.370834171144123-1.00793137938329	chr6	146979534	146979933	+	0	NA	3' UTR (NM_026221, exon 27 of 27)	3' UTR (NM_026221, exon 27 of 27)	-1326	NM_025620	66532	Mm.45888	NM_025620	ENSMUSG00000040121	Rep15	2210417D09Rik	RAB15 effector protein	protein-coding
unique_peak1-3438-15-1-3.01216475055566-4.18809100057339	chr19	6852302	6853081	+	0	NA	Intergenic	Intergenic	51743	NR_039555	100628576		NR_039555		Mir5046	mmu-mir-5046|mu-mir-5046	microRNA 5046	ncRNA
common_peak2-26581-15-16--0.075298090694683-0.301029995663976	chr2	105904049	105904670	+	0	NA	Intergenic	Intergenic	-60653	NR_033993	99349	Mm.25661	NM_026992	ENSMUSG00000027166	Dnajc24	1700030A21Rik|2610027M02Rik|AV066965|AW240712|Dph4|MmDjC7|Zcsl3	DnaJ (Hsp40) homolog, subfamily C, member 24	protein-coding
common_peak1-17044-19-24--0.241168863113038-0.344491671143527	chr6	94500066	94500737	+	0	NA	intron (NM_026255, intron 5 of 9)	intron (NM_026255, intron 5 of 9)	50093	NM_026255	67582	Mm.280725	NM_026255	ENSMUSG00000045100	Slc25a26	4930433D19Rik|4933433F13Rik|AW557176|D6Bwg0781e|Slc25a6	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26	protein-coding
unique_peak2-33730-0-7--3.84013093047421-1.80617997398389	chr11	115869857	115870118	+	0	NA	TTS (NM_133663)	TTS (NM_133663)	4046	NM_016905	14635	Mm.2820	NM_016905	ENSMUSG00000020766	Galk1	AA409894|GALK|Gk|Glk|Glk1	galactokinase 1	protein-coding
unique_peak1-6287-7-0-2.79909083029819-2.40823996531185	chr7	28943732	28944166	+	0	NA	intron (NM_001164655, intron 16 of 19)	intron (NM_001164655, intron 16 of 19)	-10818	NM_007991	14113	Mm.4595	NM_007991	ENSMUSG00000046865	Fbl	AL022665|FIB|FLRN|RNU3IP1	fibrillarin	protein-coding
unique_peak2-35060-5-8--0.874305337448166-1.10484139239135	chr16	11455026	11455351	+	0	NA	intron (NM_001290148, intron 6 of 13)	intron (NM_001290148, intron 6 of 13)	49447	NM_001290148	74478	Mm.325831	NM_028964	ENSMUSG00000071669	Snx29	4933437K13Rik|ENSMUSG00000079738|Gm11170|Gm1737|Gm930|Rundc2a	sorting nexin 29	protein-coding
common_peak1-10108-19-14-0.495796731053168-0.607095980551316	chr13	29502144	29502923	+	0	NA	intron (NM_144536, intron 13 of 15)	intron (NM_144536, intron 13 of 15)	394409	NR_045075	77920	Mm.197051	NR_045073	ENSMUSG00000086363	A330102I10Rik	-	RIKEN cDNA A330102I10 gene	ncRNA
common_peak1-13235-11-8-0.338768582809301-1.14218153353838	chr19	29101413	29102100	+	0	NA	exon (NM_021299, exon 3 of 5)	exon (NM_021299, exon 3 of 5)	-20217	NR_028360	67329	Mm.394933	NR_028360		1700018L02Rik	-	RIKEN cDNA 1700018L02 gene	ncRNA
unique_peak2-38975-7-11--0.785871670422967-1.21681515183528	chr8	35826114	35826849	+	0	NA	Intergenic	ORR1E|LTR|MaLR	-44183	NM_176933	319520	Mm.170276	NM_176933	ENSMUSG00000031530	Dusp4	2700078F24Rik|AI844617|BB104621|E130306H24Rik|MKP2	dual specificity phosphatase 4	protein-coding
unique_peak1-3965-10-6-0.549060422951165-1.21398586181642	chr2	30985171	30985793	+	0	NA	intron (NM_001038700, intron 1 of 14)	intron (NM_001038700, intron 1 of 14)	12046	NM_001177649	14269	Mm.52297	NM_019406	ENSMUSG00000075415	Fnbp1	1110057E06Rik|2210010H06Rik|FBP1|Fbp17	formin binding protein 1	protein-coding
unique_peak2-36745-4-4--0.345388608740609-0.864171920961574	chr3	58646543	58646931	+	0	NA	Intergenic	Intergenic	42397	NM_153386	229320	Mm.131502	NM_153384	ENSMUSG00000043850	Clrn1	A130002D11Rik|USH3|Ush3a	clarin 1	protein-coding
unique_peak2-34551-4-4--0.345388608740609-0.864171920961574	chr14	61686932	61687202	+	0	NA	Intergenic	Intergenic	-21375	NM_013869	29820	Mm.281356	NM_013869	ENSMUSG00000060548	Tnfrsf19	AL023044|AW123854|TAJ|TAJ-ALPHA|TRADE|Troy	tumor necrosis factor receptor superfamily, member 19	protein-coding
unique_peak1-6962-24-3-2.79320990276772-5.35253599412607	chr8	116273927	116275058	+	0	NA	intron (NM_172466, intron 12 of 22)	intron (NM_172466, intron 12 of 22)	98247	NM_172466	208936	Mm.167471	NM_172466	ENSMUSG00000053399	Adamts18	9630038L21|ADAMTS21|E130314N14Rik	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 18	protein-coding
common_peak1-13539-24-28--0.0647710923598552-0.301029995663979	chr2	3118212	3119133	+	0	NA	intron (NM_001081161, intron 4 of 7)	intron (NM_001081161, intron 4 of 7)	-82812	NM_008708	18108	Mm.65021	NM_008708	ENSMUSG00000026643	Nmt2	A930001K02Rik|AI605445|AU044698|hNMT-2	N-myristoyltransferase 2	protein-coding
unique_peak2-37059-1-5--2.2120195109379-1.32905871926422	chr3	138489678	138489947	+	0	NA	intron (NR_121195, intron 1 of 7)	RLTR11A2|LTR|ERVK	84640	NM_019571	56224	Mm.31927	NM_019571	ENSMUSG00000028152	Tspan5	2810455A09Rik|4930505M03Rik|NET-4|Tm4sf9	tetraspanin 5	protein-coding
unique_peak1-1828-11-3-1.50869358425161-1.95434855131066	chr14	34373702	34374192	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-28509	NM_008978	19256	Mm.8019	NM_008978	ENSMUSG00000021940	Ptpn20	typ	protein tyrosine phosphatase, non-receptor type 20	protein-coding
common_peak1-17075-37-14-1.6191024758773-4.20640746933198	chr6	108534241	108535579	+	0	NA	intron (NR_104577, intron 3 of 6)	intron (NR_104577, intron 3 of 6)	38251	NR_040757	75394	Mm.395061	NR_040757	ENSMUSG00000087341	0610040F04Rik	-	RIKEN cDNA 0610040F04 gene	ncRNA
unique_peak1-1153-11-5-0.923731083530457-1.477227296591	chr11	98836858	98837436	+	0	NA	TTS (NM_001176528)	TTS (NM_001176528)	7183	NM_178596	353155	Mm.453253	NM_178596	ENSMUSG00000047197	Gjd3	Gja11|Gjc1|cx30.2	gap junction protein, delta 3	protein-coding
common_peak2-24416-5-6--0.511735258063458-0.947717972411649	chr17	15830570	15830937	+	0	NA	Intergenic	Intergenic	-11178	NM_007690	12648	Mm.8137	NM_007690	ENSMUSG00000023852	Chd1	4930525N21Rik|AI851787|AW555109	chromodomain helicase DNA binding protein 1	protein-coding
unique_peak1-849-17-8-1.04837133676273-1.30305656033811	chr11	19834408	19835433	+	0	NA	intron (NM_033523, intron 1 of 5)	ID4|SINE|ID	10475	NM_033523	114716	Mm.266627	NM_033523	ENSMUSG00000045671	Spred2	C79158	sprouty-related, EVH1 domain containing 2	protein-coding
unique_peak1-5478-22-8-1.47735910364509-2.29727994934156	chr5	129929823	129930686	+	0	NA	Intergenic	B1F1|SINE|Alu	-76852	NM_172276	231769	Mm.288714	NM_172276	ENSMUSG00000029439	Sfswap	1190005N23Rik|6330437E22Rik|AI197402|AW212079|SWAP|Sfrs8|Srsf8	splicing factor, suppressor of white-apricot homolog (Drosophila)	protein-coding
common_peak2-27828-10-7-0.356415345008769-1.12966497611638	chr3	146474137	146474670	+	0	NA	intron (NM_011100, intron 1 of 9)	intron (NM_011100, intron 1 of 9)	1507	NM_011100	18749	Mm.16766	NM_011100	ENSMUSG00000005034	Prkacb	Pkacb	protein kinase, cAMP dependent, catalytic, beta	protein-coding
unique_peak2-37317-1-5--2.2120195109379-1.32905871926422	chr4	126167567	126167948	+	0	NA	3' UTR (NM_153177, exon 18 of 18)	3' UTR (NM_153177, exon 18 of 18)	-22092	NM_153403	236511	Mm.30800	NM_153403	ENSMUSG00000041530	Ago1	Eif2c1	argonaute RISC catalytic subunit 1	protein-coding
common_peak2-27438-11-9-0.186765489364251-0.344532117358383	chr3	89897370	89897765	+	0	NA	intron (NM_001271764, intron 8 of 8)	ID_B1|SINE|B4	-10487	NM_029937	77595	Mm.159949	NM_029937	ENSMUSG00000027939	Nup210l	4930548O11Rik|R26-EGFP|Tg(Gt(ROSA)26Sor-EGFP)130910Eps	nucleoporin 210-like	protein-coding
unique_peak1-6714-10-5-0.771452844287613-1.33892459842472	chr8	36993233	36993865	+	0	NA	Intergenic	Intergenic	-47538	NR_046181	330737	Mm.381743	NR_046181		5430403N17Rik	5430403N17	RIKEN cDNA 5430403N17 gene	ncRNA
unique_peak2-33366-6-7--0.434601889619698-0.97990265578305	chr11	32563488	32563863	+	0	NA	intron (NM_001271349, intron 1 of 11)	intron (NM_001271349, intron 1 of 11)	21120	NM_001271347	103583	Mm.28017	NM_134015	ENSMUSG00000020271	Fbxw11	2310065A07Rik|AA536858|BTRC2|BTRCP2|Fbxw1b|HOS	F-box and WD-40 domain protein 11	protein-coding
unique_peak2-39311-5-5--0.289342836727009-0.909929411522249	chr8	124344404	124344794	+	0	NA	intron (NM_145605, intron 3 of 11)	intron (NM_145605, intron 3 of 11)	8870	NM_145605	234825	Mm.209329	NM_145605	ENSMUSG00000040263	Klhdc4	AA408426|AV352552|BC012312|G430025P05Rik	kelch domain containing 4	protein-coding
common_peak1-12801-13-13--0.0288828914198356-0.309074325783021	chr18	65430952	65431613	+	0	NA	intron (NM_001037294, intron 12 of 12)	intron (NM_001037294, intron 12 of 12)	22767	NR_029600	387231		NR_029600	miRBase:MI0000256	Mir122a	Mirn122a|mmu-mir-122	microRNA 122a	ncRNA
common_peak1-13774-20-14-0.581184188982674-0.690311289528838	chr2	35680668	35681586	+	0	NA	intron (NM_029774, intron 6 of 9)	intron (NM_029774, intron 6 of 9)	6417	NR_040618	77665	Mm.400558	NR_040618	ENSMUSG00000086449	9030204H09Rik	-	RIKEN cDNA 9030204H09 gene	ncRNA
common_peak2-25587-32-27-0.471737097162056-0.777451270049544	chr19	7417415	7418221	+	0	NA	Intergenic	ID_B1|SINE|B4	-1468	NM_001080388	13728	Mm.258986	NM_007928	ENSMUSG00000024969	Mark2	EMK-1|Emk|Par-1|Par-1b	MAP/microtubule affinity-regulating kinase 2	protein-coding
common_peak1-17552-33-18-1.08341004908194-2.15925086250253	chr7	30094461	30095679	+	0	NA	intron (NM_013874, intron 3 of 11)	intron (NM_013874, intron 3 of 11)	6046	NM_013874	29861	Mm.101885	NM_013874	ENSMUSG00000030584	Dpf1	Neud4	D4, zinc and double PHD fingers family 1	protein-coding
common_peak1-9163-7-7--0.200909169701811-0.97990265578305	chr11	77981915	77982428	+	0	NA	intron (NM_080849, intron 10 of 14)	intron (NM_080849, intron 10 of 14)	-3119	NM_009423	22032	Mm.390418	NM_009423		Traf4	A530032M13Rik|CART1|msp2	TNF receptor associated factor 4	protein-coding
unique_peak2-38145-4-5--0.608423014574403-0.909929411522249	chr6	85587618	85587884	+	0	NA	intron (NM_145223, intron 10 of 22)	L1MA4|LINE|L1	50226	NM_145223	236266	Mm.246967	NM_145223	ENSMUSG00000063810	Alms1	bbb	Alstrom syndrome 1	protein-coding
unique_peak1-3455-20-4-2.16614668970383-3.28004177908661	chr19	9040976	9041942	+	0	NA	promoter-TSS (NM_026007)	promoter-TSS (NM_026007)	-72	NM_026007	67160	Mm.247762	NM_026007	ENSMUSG00000071644	Eef1g	2610301D06Rik|AA407312|EF1G	eukaryotic translation elongation factor 1 gamma	protein-coding
unique_peak2-34252-10-26--1.3984721571547-1.90052685918624	chr13	59675303	59676035	+	0	NA	Intergenic	PB1D10|SINE|Alu	10915	NR_045633	319469	Mm.437992	NR_045633	ENSMUSG00000021557	A230056J06Rik	-	RIKEN cDNA A230056J06 gene	ncRNA
common_peak1-12181-41-60--0.229588632714226-0.425219862997755	chr17	31657896	31659017	+	0	NA	intron (NM_001083891, intron 1 of 2)	intron (NM_001083891, intron 1 of 2)	1396	NM_001083891	78330	Mm.28349	NM_030087	ENSMUSG00000024038	Ndufv3	1500032D16Rik	NADH dehydrogenase (ubiquinone) flavoprotein 3	protein-coding
common_peak1-12244-46-55-0.0906410211911979-0.348250801558495	chr17	35776360	35777720	+	0	NA	intron (NM_001033366, intron 1 of 2)	ORR1D1|LTR|MaLR	3600	NM_001033366	268949	Mm.296301	NM_001033366	ENSMUSG00000073408	Dpcr1	Gm630	diffuse panbronchiolitis critical region 1 (human)	protein-coding
common_peak1-11031-129-169-0.269129385828368-1.05466374715375	chr15	40654102	40656737	+	0	NA	intron (NM_011766, intron 3 of 7)	intron (NM_011766, intron 3 of 7)	168831	NM_011766	22762	Mm.39496	NM_011766	ENSMUSG00000022306	Zfpm2	B330005D23Rik|FOG-2|FOG2	zinc finger protein, multitype 2	protein-coding
unique_peak1-4962-14-4-1.57728806547028-2.4322161449009	chr4	101291883	101292672	+	0	NA	intron (NM_001164585, intron 13 of 19)	intron (NM_001164585, intron 13 of 19)	-28111	NM_175036	230514	Mm.4756	NM_175036	ENSMUSG00000035212	Leprot	LEPR|OB-RGRP|Obrgrp|VPS55	leptin receptor overlapping transcript	protein-coding
common_peak1-15286-18-15-0.312919151228352-0.456667090758524	chr4	41134476	41135256	+	0	NA	intron (NM_026275, intron 3 of 4)	Lx6|LINE|L1	51812	NM_026275	67615	Mm.389540	NM_026275	ENSMUSG00000036241	Ube2r2	1200003M11Rik|Cdc34b|Ubc3b	ubiquitin-conjugating enzyme E2R 2	protein-coding
common_peak2-31950-29-18-0.864362567171526-1.50628532113231	chr9	65196548	65197075	+	0	NA	intron (NM_016688, intron 1 of 4)	intron (NM_016688, intron 1 of 4)	2936	NM_016688	50996	Mm.29193	NM_016688	ENSMUSG00000041837	Pdcd7	C80112|ES18	programmed cell death 7	protein-coding
common_peak2-31198-24-37--0.454717610675869-0.572500200098104	chr8	60982590	60983733	+	0	NA	intron (NM_175032, intron 2 of 11)	Lx9|LINE|L1	196432	NM_001177534	100271928	Mm.484123	NM_001177534		Gm15881	OTTMUSG00000027193	predicted gene 15881	protein-coding
common_peak1-12465-59-65-0.280969881514125-0.638586184011	chr17	84074753	84076352	+	0	NA	Intergenic	RLTR14|LTR|ERV1	-29951	NM_001171054	116871	Mm.277668	NM_054082	ENSMUSG00000055817	Mta3	1110002J22Rik|mKIAA1266	metastasis associated 3	protein-coding
common_peak1-15315-124-175-0.150448700751383-0.535898222341529	chr4	45488689	45491622	+	0	NA	intron (NM_001033306, intron 2 of 5)	intron (NM_001033306, intron 2 of 5)	53545	NM_001033306	230126	Mm.251716	NM_001033306	ENSMUSG00000044813	Shb	BC028832	src homology 2 domain-containing transforming protein B	protein-coding
common_peak1-16586-47-65--0.109552694591906-0.328608881955056	chr5	148398832	148400015	+	0	NA	intron (NM_010228, intron 20 of 29)	B4A|SINE|B4	138141	NM_010228	14254	Mm.389712	NM_010228	ENSMUSG00000029648	Flt1	AI323757|Flt-1|VEGFR-1|VEGFR1|sFlt1	FMS-like tyrosine kinase 1	protein-coding
unique_peak1-3149-13-4-1.45654393575041-2.23384849113406	chr18	36688091	36688720	+	0	NA	exon (NM_001271546, exon 2 of 22)	exon (NM_001271546, exon 2 of 22)	599	NM_001271544	240215	Mm.135463	NM_172830	ENSMUSG00000024485	Slc4a9	AE4|D630003B07|D630024F24Rik	solute carrier family 4, sodium bicarbonate cotransporter, member 9	protein-coding
common_peak1-19446-13-19--0.543456064249594-0.466170754204149	chrX	98936448	98937066	+	0	NA	Intergenic	Intergenic	-7271	NM_009910	12766	Mm.12876	NM_009910	ENSMUSG00000050232	Cxcr3	Cd183|Cmkar3	chemokine (C-X-C motif) receptor 3	protein-coding
unique_peak1-3214-17-1-3.21829633820504-4.59734841376773	chr18	57686767	57687484	+	0	NA	intron (NR_015541, intron 1 of 1)	intron (NR_015541, intron 1 of 1)	6281	NR_015541	74916	Mm.444721	NR_015541	ENSMUSG00000085800	1700066O22Rik	4930500F21Rik|4930515O13Rik|4930542C11Rik	RIKEN cDNA 1700066O22 gene	ncRNA
unique_peak2-34136-4-5--0.608423014574403-0.909929411522249	chr13	23536431	23536847	+	0	NA	Intergenic	Intergenic	-13753	NR_015492	320842	Mm.487476	NR_015492	ENSMUSG00000085024	C230035I16Rik	-	RIKEN cDNA C230035I16 gene	ncRNA
common_peak1-18790-58-82--0.0790894964564277-0.313169363846758	chr9	31029227	31031363	+	0	NA	intron (NR_037304, intron 1 of 3)	intron (NR_037304, intron 1 of 3)	-10895	NM_001102456	11804	Mm.19133	NM_009691	ENSMUSG00000031996	Aplp2	AI790698|APLP-2	amyloid beta (A4) precursor-like protein 2	protein-coding
common_peak1-15423-43-69--0.346719831421264-0.644995680934529	chr4	88937191	88938622	+	0	NA	intron (NM_009877, intron 1 of 2)	intron (NM_009877, intron 1 of 2)	2617	NM_009877	12578	Mm.4733	NM_009877	ENSMUSG00000044303	Cdkn2a	ARF-INK4a|Arf|INK4a-ARF|Ink4a/Arf|MTS1|Pctr1|p16|p16(INK4a)|p16INK4a|p19<ARF>|p19ARF	cyclin-dependent kinase inhibitor 2A	protein-coding
unique_peak2-33285-3-7--1.41398308995928-1.23214870625617	chr11	60210914	60211342	+	0	NA	Intergenic	Intergenic	19473	NM_145427	246782	Mm.41651	NM_145427	ENSMUSG00000042709	Atpaf2	ATP12|ATP12p	ATP synthase mitochondrial F1 complex assembly factor 2	protein-coding
unique_peak1-3573-7-0-2.79909083029819-2.40823996531185	chr19	28863003	28863528	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-46391	NM_009199	20510	Mm.246670	NM_009199	ENSMUSG00000024935	Slc1a1	D130048G10Rik|EAAC1|EAAC2|EAAT3|MEAAC1	solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	protein-coding
common_peak1-16022-19-6-1.59533240460408-2.21753093801298	chr5	35743209	35744003	+	0	NA	Intergenic	Intergenic	11840	NM_010445	15371	Mm.358606	NM_010445	ENSMUSG00000067438	Hmx1	Nkx5-3	H6 homeobox 1	protein-coding
unique_peak1-3211-13-3-1.77847203063777-2.58603100924543	chr18	57166018	57166586	+	0	NA	Intergenic	Intergenic	-31269	NM_029909	77422	Mm.256874	NM_029909	ENSMUSG00000024592	C330018D20Rik	AU018666	RIKEN cDNA C330018D20 gene	protein-coding
unique_peak1-6139-10-3-1.35641534500877-1.75805390616669	chr6	135000205	135000732	+	0	NA	Intergenic	Intergenic	-15212	NM_181444	232431	Mm.23575	NM_181444	ENSMUSG00000046733	Gprc5a	Rai3|Raig1	G protein-coupled receptor, family C, group 5, member A	protein-coding
unique_peak1-586-10-1-2.35641534500877-2.57096726280955	chr10	12017245	12017851	+	0	NA	Intergenic	MTD|LTR|MaLR	563985	NM_011682	22288	Mm.331784	NM_011682	ENSMUSG00000019820	Utrn	AA589569|DRP|Dmdl	utrophin	protein-coding
unique_peak2-35028-7-6--0.00826409175941478-0.97990265578305	chr15	103216001	103216426	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-19034	NM_010577	16402	Mm.16234	NM_010577	ENSMUSG00000000555	Itga5	Cd49e|Fnra|VLA5	integrin alpha 5 (fibronectin receptor alpha)	protein-coding
unique_peak1-1818-9-6-0.382258484346616-1.11707584880836	chr14	32003842	32004355	+	0	NA	intron (NM_022656, intron 6 of 20)	intron (NM_022656, intron 6 of 20)	15914	NM_022656	64652	Mm.298728	NM_022656	ENSMUSG00000021910	Nisch	1200007D05Rik|3202002H23Rik|AW494485|I-1	nischarin	protein-coding
unique_peak1-4045-10-3-1.35641534500877-1.75805390616669	chr2	59627217	59627880	+	0	NA	intron (NM_001290659, intron 7 of 25)	intron (NM_001290659, intron 7 of 25)	93115	NM_001159636	72137	Mm.288734	NM_028118	ENSMUSG00000026988	Wdsub1	1700048E19Rik|2610014F08Rik	WD repeat, SAM and U-box domain containing 1	protein-coding
common_peak2-30854-22-54--1.13407560843726-2.66762268841486	chr7	137437596	137438426	+	0	NA	Intergenic	RSINE1|SINE|B4	-27689	NM_201601	14183	Mm.16340	NM_010207	ENSMUSG00000030849	Fgfr2	AU043015|AW556123|Bek|Fgfr-2|Fgfr-7|Fgfr7|KGFR|KGFRTr|svs	fibroblast growth factor receptor 2	protein-coding
unique_peak1-5124-9-1-2.18961340640422-2.31132995230379	chr5	77397983	77398519	+	0	NA	Intergenic	Intergenic	-5475	NM_025691	66661	Mm.296976	NM_025691	ENSMUSG00000036323	Srp72	5730576P14Rik|72kDa|AI132477|BC019196|C77589	signal recognition particle 72	protein-coding
common_peak2-30833-25-14-0.954959309736587-1.46151065785802	chr7	132345152	132345735	+	0	NA	Intergenic	ORR1D1-int|LTR|MaLR	147857	NR_045804	71208	Mm.159465	NM_172408		4933440M02Rik	-	RIKEN cDNA 4933440M02 gene	ncRNA
common_peak1-8264-16-15-0.118263642268062-0.328191099940264	chr10	22730670	22731328	+	0	NA	Intergenic	Intergenic	-191065	NM_011545	21412	Mm.16497	NM_011545	ENSMUSG00000045680	Tcf21	Pod-1|Pod1|bHLHa23|capsulin|epc|epicardin	transcription factor 21	protein-coding
unique_peak2-35876-8-9--0.316705676939792-1.03275496310833	chr18	82517960	82518453	+	0	NA	Intergenic	Intergenic	57963	NM_008082	14427	Mm.6219	NM_008082	ENSMUSG00000024553	Galr1	Galnr1	galanin receptor 1	protein-coding
common_peak2-27961-25-20-0.469532482566345-0.662033714151238	chr4	40757348	40757907	+	0	NA	intron (NM_022305, intron 3 of 5)	intron (NM_022305, intron 3 of 5)	39544	NR_039584	100628614		NR_039584		Mir5123	mmu-mir-5123|mu-mir-5123	microRNA 5123	ncRNA
unique_peak2-38256-4-5--0.608423014574403-0.909929411522249	chr6	125165114	125165463	+	0	NA	promoter-TSS (NM_001080557)	promoter-TSS (NM_001080557)	-311	NM_009496	22317	Mm.32321	NM_009496	ENSMUSG00000030337	Vamp1	Syb-1|Syb1|VAMP-1|lew	vesicle-associated membrane protein 1	protein-coding
unique_peak2-39873-4-17--2.19338551529556-2.18192634393779	chrX	74246567	74247241	+	0	NA	Intergenic	Intergenic	-398641	NM_001201395	74987	Mm.107996	NM_001201395	ENSMUSG00000079525	4930468A15Rik	-	RIKEN cDNA 4930468A15 gene	protein-coding
common_peak1-11310-100-103-0.536332056669698-2.28263805875227	chr15	84712318	84715477	+	0	NA	Intergenic	GA-rich|Low_complexity|Low_complexity	-27338	NR_030731	271305	Mm.101022	NM_001081166	ENSMUSG00000016624	Phf21b	A730032D07Rik	PHD finger protein 21B	protein-coding
unique_peak2-34745-4-14--1.93035110946177-2.23384849113406	chr15	54354002	54354440	+	0	NA	Intergenic	Intergenic	-48700	NM_178920	105853	Mm.410994	NM_178920	ENSMUSG00000024479	Mal2	AI461653	mal, T cell differentiation protein 2	protein-coding
common_peak1-16077-33-32-0.286943443167075-0.49444889977478	chr5	53948357	53949455	+	0	NA	intron (NM_001080928, intron 1 of 10)	intron (NM_001080928, intron 1 of 10)	1888	NM_001080928	19664	Mm.209292	NM_009035	ENSMUSG00000039191	Rbpj	AI843960|CBF1|Igkjrb|Igkrsbp|RBP-J|RBP-J kappa|RBPjk|Rbpsuh	recombination signal binding protein for immunoglobulin kappa J region	protein-coding
common_peak1-11415-20-5-1.90311228387004-2.81016724606745	chr15	99343156	99344126	+	0	NA	intron (NM_001038658, intron 8 of 11)	intron (NM_001038658, intron 8 of 11)	14955	NM_028224	72393	Mm.39760	NM_028224	ENSMUSG00000023011	Faim2	2900002L20Rik|Lfg|Lfg2|NMP25|Nmp35|Tmbim2	Fas apoptotic inhibitory molecule 2	protein-coding
unique_peak1-6467-69-6-3.78778752520113-21.3706511305489	chr7	107663573	107666252	+	0	NA	Intergenic	B3A|SINE|B2	-1588	NM_153527	69387	Mm.278554	NM_153527	ENSMUSG00000030708	Dnajb13	1700014P03Rik|Tsarg	DnaJ (Hsp40) related, subfamily B, member 13	protein-coding
unique_peak1-5934-6-2-0.980435609659146-1.26211192963361	chr6	89580135	89580538	+	0	NA	Intergenic	Intergenic	-13646	NM_001178060	232223	Mm.229332	NM_153162	ENSMUSG00000000811	Txnrd3	AI196535|TR2|Tgr	thioredoxin reductase 3	protein-coding
common_peak1-19135-93-144--0.0688392265086657-0.328753011933461	chr9	80066470	80068156	+	0	NA	intron (NM_001039546, intron 2 of 32)	intron (NM_001039546, intron 2 of 32)	54472	NM_001039546	17920	Mm.4040	NM_008662	ENSMUSG00000033577	Myo6	BC029719|Tlc|sv	myosin VI	protein-coding
common_peak2-23841-18-8-1.14299414978604-1.45476480588849	chr15	101981016	101981600	+	0	NA	intron (NM_146064, intron 1 of 14)	intron (NM_146064, intron 1 of 14)	302	NM_146064	223920	Mm.358862	NM_146064	ENSMUSG00000023045	Soat2	ACAT2|D15Wsu97e	sterol O-acyltransferase 2	protein-coding
common_peak2-21526-14-15--0.100783839642355-0.301029995663982	chr11	95076673	95077511	+	0	NA	Intergenic	Intergenic	-45751	NM_053093	93670	Mm.40085	NM_053093	ENSMUSG00000020872	Tac4	AW489379|PPT-C	tachykinin 4	protein-coding
common_peak2-27591-8-9--0.316705676939792-1.03275496310833	chr3	102366134	102366563	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	92506	NM_013609	18049	Mm.1259	NM_013609	ENSMUSG00000027859	Ngf	Ngfb	nerve growth factor	protein-coding
unique_peak2-35818-5-8--0.874305337448166-1.10484139239135	chr18	64188982	64189399	+	0	NA	Intergenic	Intergenic	-224823	NM_009182	20451	Mm.252110	NM_009182	ENSMUSG00000056812	St8sia3	AI847333|ST8SiaIII|Siat8c	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	protein-coding
unique_peak2-32614-10-24--1.28744084476596-1.59083646988122	chr1	105990472	105991483	+	0	NA	Intergenic	L1_Mur1|LINE|L1	-674419	NM_011800	23836	Mm.103640	NM_011800	ENSMUSG00000050840	Cdh20	Cdh7	cadherin 20	protein-coding
common_peak2-22686-63-44-0.946459494740915-3.42351243995247	chr13	98475322	98476689	+	0	NA	Intergenic	Intergenic	146050	NR_046157	328314	Mm.138047	NR_046157		Gm5086	B230311A21|EG328314	predicted gene 5086	ncRNA
unique_peak1-3611-44-10-2.36246121593124-8.20789469752738	chr19	32904840	32906262	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	73484	NM_008960	19211	Mm.245395	NM_008960	ENSMUSG00000013663	Pten	2310035O07Rik|A130070J02Rik|AI463227|B430203M17Rik|MMAC1|TEP1	phosphatase and tensin homolog	protein-coding
unique_peak1-3703-8-1-2.00522241794757-2.05605744720049	chr19	43954870	43955395	+	0	NA	intron (NM_028029, intron 4 of 15)	intron (NM_028029, intron 4 of 15)	41839	NR_033472	100038628	Mm.212585	NR_033472	ENSMUSG00000074828	Gm10768	ENSMUSG00000074828	predicted gene 10768	ncRNA
common_peak1-18360-25-51--0.838589812795986-1.63185160949148	chr8	70041990	70042931	+	0	NA	Intergenic	MLT1F-int|LTR|MaLR	-5293	NM_008674	17962	Mm.57193	NM_008674	ENSMUSG00000056426	Nat3	-	N-acetyltransferase 3	protein-coding
common_peak2-27618-8-8--0.164702583494742-1.00793137938329	chr3	104675086	104675489	+	0	NA	intron (NR_045578, intron 3 of 13)	B3|SINE|B2	7863	NM_153091	229681	Mm.206379	NM_153091		St7l	St7r	suppression of tumorigenicity 7-like	protein-coding
common_peak2-27962-8-7-0.00522241794757061-1.00793137938329	chr4	40852309	40852716	+	0	NA	Intergenic	Intergenic	-14577	NM_011463	20731	Mm.25246	NM_011463	ENSMUSG00000028415	Spink4	MPGC60	serine peptidase inhibitor, Kazal type 4	protein-coding
common_peak1-12553-30-25-0.469235691350781-0.734130039933318	chr18	6760364	6761390	+	0	NA	Intergenic	Intergenic	-4288	NM_181070	19330	Mm.132802	NM_181070		Rab18	AA959686	RAB18, member RAS oncogene family	protein-coding
unique_peak1-4574-9-4-0.867685311516858-1.36011389749466	chr3	57054824	57055427	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	50716	NM_008536	17112	Mm.856	NM_008536	ENSMUSG00000027800	Tm4sf1	L6|M3s1	transmembrane 4 superfamily member 1	protein-coding
unique_peak2-37712-2-6--1.72480917832092-1.26211192963361	chr5	104380519	104380945	+	0	NA	Intergenic	RMER2|LTR|ERV1	25675	NM_198030	243168	Mm.284944	NM_198030	ENSMUSG00000034528	Hsd17b13	AI047820|PAN1B-like|Pan1b	hydroxysteroid (17-beta) dehydrogenase 13	protein-coding
unique_peak2-33992-24-36--0.416243462861233-0.518746288394493	chr12	86859125	86860930	+	0	NA	Intergenic	MURVY-LTR|LTR|ERV1	45176	NM_010234	14281	Mm.246513	NM_010234	ENSMUSG00000021250	Fos	D12Rfj1|c-fos|cFos	FBJ osteosarcoma oncogene	protein-coding
common_peak1-18114-31-19-0.903310575925761-1.57996244908225	chr8	3608064	3609348	+	0	NA	exon (NM_001163749, exon 17 of 17)	exon (NM_001163749, exon 17 of 17)	12590	NM_026156	67439	Mm.23739	NM_026156	ENSMUSG00000019470	Xab2	0610041O14Rik|AV025587	XPA binding protein 2	protein-coding
common_peak2-20371-26-51--0.77254062598263-1.49688973786043	chr10	13966839	13967866	+	0	NA	Intergenic	L1Md_F2|LINE|L1	281167	NM_010437	15273	Mm.42157	NM_010437	ENSMUSG00000015501	Hivep2	MIBP1|Schnurri-2|Shn-2	human immunodeficiency virus type I enhancer binding protein 2	protein-coding
common_peak2-22129-23-29--0.185123091099438-0.336580821310529	chr12	84996307	84996976	+	0	NA	intron (NM_027349, intron 6 of 18)	intron (NM_027349, intron 6 of 18)	23457	NM_027349	67039	Mm.46005	NM_027349	ENSMUSG00000010608	Rbm25	2600011C06Rik|2610015J01Rik|A130095G20Rik|AI159652|AL023075|AU043498|RNPC7	RNA binding motif protein 25	protein-coding
common_peak2-31826-13-14--0.12841856497075-0.301029995663977	chr9	44305054	44305766	+	0	NA	Intergenic	Intergenic	-1809	NM_030256	80288	Mm.370270	NM_030256	ENSMUSG00000063382	Bcl9l	B9L|BC003321|BCL9-2|DLNB11	B cell CLL/lymphoma 9-like	protein-coding
unique_peak1-1741-18-6-1.50556422917075-2.02801025126771	chr13	102108645	102109511	+	0	NA	Intergenic	L1_Mur3|LINE|L1	58457	NR_046187	78136	Mm.399065	NR_046187		4922502H24Rik	-	RIKEN cDNA 4922502H24 gene	ncRNA
unique_peak2-32664-4-11--1.6084230145744-1.68134727924692	chr1	135258677	135259194	+	0	NA	Intergenic	MER3|DNA|MER1_type	-1214	NM_175443	214253	Mm.52111	NM_175443	ENSMUSG00000070644	Etnk2	4933417N20Rik|AI197444|EKI 2|Eki2|Tuc1	ethanolamine kinase 2	protein-coding
unique_peak2-38728-0-4--3.16205902536157-1.10720996964787	chr7	112279026	112279418	+	0	NA	Intergenic	polypyrimidine|Low_complexity|Low_complexity	9249	NM_207557	404318	Mm.377938	NM_207557	ENSMUSG00000095248	Olfr681	MOR4014	olfactory receptor 681	protein-coding
unique_peak2-34234-4-11--1.6084230145744-1.68134727924692	chr13	52658601	52659290	+	0	NA	Intergenic	RLTR14|LTR|ERV1	9649	NR_046069	100040572	Mm.278873	NR_046069		Gm2848	-	predicted gene 2848	ncRNA
unique_peak2-34485-2-8--2.08737925770563-1.65811743852845	chr14	40956810	40957235	+	0	NA	Intergenic	Lx|LINE|L1	488071	NR_045936	73591	Mm.65499	NR_045936		1700109I08Rik	-	RIKEN cDNA 1700109I08 gene	ncRNA
common_peak2-22904-50-58-0.158297267117111-0.413183870294151	chr14	34362486	34364516	+	0	NA	Intergenic	Intergenic	-38955	NM_008978	19256	Mm.8019	NM_008978	ENSMUSG00000021940	Ptpn20	typ	protein tyrosine phosphatase, non-receptor type 20	protein-coding
common_peak1-7629-27-44--0.500307145434439-0.714193724415661	chr1	64305218	64306344	+	0	NA	Intergenic	Intergenic	-137818	NM_033563	93691	Mm.29466	NM_033563	ENSMUSG00000025959	Klf7	9830124P08Rik	Kruppel-like factor 7 (ubiquitous)	protein-coding
common_peak2-26950-11-21--0.950738034385684-0.991115276827166	chr2	164785001	164785812	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-8082	NM_020333	57138	Mm.252987	NM_020333	ENSMUSG00000017740	Slc12a5	KCC2|mKIAA1176	solute carrier family 12, member 5	protein-coding
unique_peak2-38368-1-8--2.79698201165906-2.05605744720049	chr7	5607860	5608370	+	0	NA	Intergenic	AT_rich|Low_complexity|Low_complexity	-18091	NM_030741	81016	Mm.160381	NM_030741	ENSMUSG00000092579	Vmn1r62	V1rd2|V1rd8|V3R2	vomeronasal 1 receptor 62	protein-coding
common_peak2-19973-13-17--0.391452970804544-0.364171515310935	chr1	133222342	133223124	+	0	NA	intron (NM_001081011, intron 13 of 22)	RLTR19-int|LTR|ERVK	-46593	NM_019777	56489	Mm.386783	NM_019777	ENSMUSG00000042349	Ikbke	AW558201|IKK-i|IKKepsilon|Ikki	inhibitor of kappaB kinase epsilon	protein-coding
common_peak2-31861-15-15-0.0121647505556561-0.30803596071496	chr9	50885532	50886393	+	0	NA	promoter-TSS (NM_001033534)	promoter-TSS (NM_001033534)	-763	NM_001033534	244864	Mm.335152	NM_001033534	ENSMUSG00000060594	Layn	E030012M19Rik|Gm511	layilin	protein-coding
unique_peak2-39370-3-5--0.998945590680433-0.96108193396963	chr9	14366588	14366931	+	0	NA	intron (NM_001081395, intron 6 of 12)	intron (NM_001081395, intron 6 of 12)	52685	NM_001081395	75723	Mm.159552	NM_001081395	ENSMUSG00000013076	Amotl1	2310010G08Rik|2310067L22Rik|4932416D09Rik|JEAP|mFLJ00155	angiomotin-like 1	protein-coding
common_peak1-7445-83-89-0.422369528776452-1.36401759066473	chr1	59669993	59671611	+	0	NA	intron (NM_001013771, intron 13 of 19)	intron (NM_001013771, intron 13 of 19)	56876	NM_009460	22218	Mm.362118	NM_009460	ENSMUSG00000026021	Sumo1	GMP1|PIC1|SENTRIN|SMT3|SMT3H3|SMTP3|SUMO-1|Smt3C|Ubl1	SMT3 suppressor of mif two 3 homolog 1 (yeast)	protein-coding
common_peak2-23018-6-6--0.241956811677302-0.947717972411649	chr14	63132377	63132746	+	0	NA	Intergenic	MTEa|LTR|MaLR	-42013	NM_001243857	629059	Mm.291864	NM_001243857	ENSMUSG00000035184	Fam124a	EG629059	family with sequence similarity 124, member A	protein-coding
common_peak1-17671-29-40--0.245261924002973-0.373466121463214	chr7	65481668	65482872	+	0	NA	Intergenic	B1F1|SINE|Alu	-431302	NM_009728	11982	Mm.135129	NM_009728	ENSMUSG00000025324	Atp10a	Atp10c|pfatp	ATPase, class V, type 10A	protein-coding
common_peak1-13572-16-16-0.0308008010177225-0.307611222530525	chr2	11398017	11398868	+	0	NA	intron (NM_001177753, intron 16 of 17)	intron (NM_001177753, intron 16 of 17)	25275	NM_001177754	170768	Mm.19669	NM_133232	ENSMUSG00000026773	Pfkfb3	E330010H22Rik|iPFK-2|uPFK-2	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	protein-coding
common_peak1-12104-15-34--1.11711826638931-1.74023246399357	chr17	26068777	26069546	+	0	NA	exon (NM_001291025, exon 6 of 12)	exon (NM_001291025, exon 6 of 12)	9773	NM_001291025	14755	Mm.362054	NM_011822	ENSMUSG00000025728	Pigq	Gpi1|Gpi1h|Gpi1p|Gpih	phosphatidylinositol glycan anchor biosynthesis, class Q	protein-coding
common_peak1-15275-8-7-0.00522241794757061-1.00793137938329	chr4	34614456	34614944	+	0	NA	intron (NM_011895, intron 7 of 7)	RMER6-int|LTR|ERVK	19987	NM_011895	24060	Mm.281885	NM_011895	ENSMUSG00000028293	Slc35a1	AA408150|AI314851	solute carrier family 35 (CMP-sialic acid transporter), member 1	protein-coding
common_peak2-22533-29-28-0.254309085487539-0.470271536760928	chr13	55622243	55623521	+	0	NA	Intergenic	B4|SINE|B4	7017	NM_013739	27261	Mm.33910	NM_013739	ENSMUSG00000035711	Dok3	AI450713|Dokl	docking protein 3	protein-coding
common_peak2-21084-108-137-0.2616525046299-0.865560408849042	chr11	50430302	50431715	+	0	NA	intron (NM_175643, intron 2 of 21)	intron (NM_175643, intron 2 of 21)	15421	NM_175643	216725	Mm.110597	NM_175643	ENSMUSG00000036545	Adamts2	ADAM-TS2|ADAMTS-2|ADAMTS-3|PCINP|hPCPNI|mKIAA4060|pNPI	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 2	protein-coding
unique_peak2-35985-5-6--0.511735258063458-0.947717972411649	chr19	25399412	25399845	+	0	NA	intron (NM_181404, intron 3 of 13)	(TC)n|Simple_repeat|Simple_repeat	87936	NM_181404	107351	Mm.260722	NM_181404	ENSMUSG00000032702	Kank1	A930031B09Rik|AU015049|AW121052|Ankrd15|D330024H06Rik|mKIAA0172	KN motif and ankyrin repeat domains 1	protein-coding
unique_peak2-33249-5-6--0.511735258063458-0.947717972411649	chr10	127120820	127121187	+	0	NA	intron (NM_173732, intron 1 of 6)	intron (NM_173732, intron 1 of 6)	6882	NM_001113211	210035	Mm.251075	NM_173732	ENSMUSG00000040195	Tmem194	Tmem194a	transmembrane protein 194	protein-coding
unique_peak1-2629-15-5-1.4272022498345-1.61682445937017	chr16	42190223	42191000	+	0	NA	Intergenic	Intergenic	112971	NR_105858	102466172		NR_105858		Mir6540	mmu-mir-6540	microRNA mir-6540	ncRNA
common_peak1-17463-23-17-0.551842503066768-0.713114929964887	chr7	19326377	19327561	+	0	NA	Intergenic	Intergenic	23530	NM_001004152	243862	Mm.389833	NM_001004152	ENSMUSG00000044903	Psg22	AA408604|cea9	pregnancy-specific glycoprotein 22	protein-coding
common_peak1-18190-359-515-0.449887339917682-6.7526817176777	chr8	20295967	20298159	+	0	NA	Intergenic	Intergenic	-276671	NR_028428	381598	Mm.359054	NM_001024708	ENSMUSG00000071793	2610005L07Rik	2810038F24Rik|6720476A01Rik	cadherin 11 pseudogene	pseudo
unique_peak1-503-10-6-0.549060422951165-1.21398586181642	chr1	181009157	181009727	+	0	NA	intron (NM_027188, intron 8 of 11)	intron (NM_027188, intron 8 of 11)	438692	NM_027188	69726	Mm.222338	NM_027188		Smyd3	2410008A19Rik|Zmynd1	SET and MYND domain containing 3	protein-coding
unique_peak2-33529-3-17--2.58390809140159-2.65002542325363	chr11	76623375	76623940	+	0	NA	intron (NM_007754, intron 6 of 20)	LTR48|LTR|ERV1	36853	NM_007754	12874	Mm.276736	NM_007754	ENSMUSG00000020841	Cpd	AA960140|AW322530|D830034L15Rik	carboxypeptidase D	protein-coding
common_peak2-28465-4-5--0.608423014574403-0.909929411522249	chr4	152186986	152187343	+	0	NA	Intergenic	Intergenic	115515	NR_033138	330004	Mm.291863	NM_001033414		Gm833	-	predicted gene 833	ncRNA
common_peak1-9706-11-7-0.508693584251613-1.21681515183528	chr12	28649689	28650140	+	0	NA	Intergenic	Lx2B|LINE|L1	583288	NM_001177964	68511	Mm.310284	NM_001177964		Dcdc2c	1110015M06Rik	doublecortin domain containing 2C	protein-coding
common_peak2-31494-14-17--0.270708841084668-0.328191099940267	chr8	106678100	106678875	+	0	NA	Intergenic	Lx6|LINE|L1	-15926	NM_001141924	65115	Mm.41849	NM_001141922	ENSMUSG00000031872	Bean1	Bean	brain expressed, associated with Nedd4, 1	protein-coding
unique_peak2-35483-5-6--0.511735258063458-0.947717972411649	chr17	45564212	45564597	+	0	NA	intron (NM_152810, intron 2 of 15)	intron (NM_152810, intron 2 of 15)	6252	NM_152810	71702	Mm.28270	NM_152810	ENSMUSG00000023932	Cdc5l	1200002I02Rik|AA408004|PCDC5RP	cell division cycle 5-like (S. pombe)	protein-coding
common_peak1-18721-15-9-0.690236655668294-0.732381977911291	chr8	123051757	123052599	+	0	NA	intron (NM_198671, intron 1 of 15)	intron (NM_198671, intron 1 of 15)	-7579	NM_001145897	382034	Mm.334856	NM_198671	ENSMUSG00000031822	Gse1	2210013I18Rik|mKIAA0182	genetic suppressor element 1	protein-coding
unique_peak1-1832-13-7-0.778472030637769-0.817533494790411	chr14	40979496	40980303	+	0	NA	Intergenic	Intergenic	510948	NR_045936	73591	Mm.65499	NR_045936		1700109I08Rik	-	RIKEN cDNA 1700109I08 gene	ncRNA
common_peak2-31800-23-41--0.67054991826968-1.0364730969458	chr9	35420971	35421616	+	0	NA	Intergenic	MLT1D|LTR|MaLR	-1823	NM_020264	56872	Mm.390143	NM_020264	ENSMUSG00000032099	Pate4	9530004K16Rik|Pate-B|Svs7	prostate and testis expressed 4	protein-coding
common_peak2-23431-44-62--0.155387088931382-0.346662596190348	chr15	62037448	62038818	+	0	NA	intron (NR_003368, intron 5 of 8)	intron (NR_003368, intron 5 of 8)	12873	NR_003523	67552	Mm.484027	NM_026230		H2afy3	4933432H23Rik	H2A histone family, member Y3	pseudo
common_peak1-11555-41-42-0.274883950146562-0.532475415427916	chr16	11007754	11009359	+	0	NA	promoter-TSS (NR_040518)	promoter-TSS (NR_040518)	-435	NR_040518	100043147	Mm.489001	NR_040518	ENSMUSG00000097056	Gm4262	-	predicted gene 4262	ncRNA
common_peak1-15198-14-10-0.439784541720347-0.519648556297791	chr4	45481727	45482354	+	0	NA	intron (NM_001033306, intron 2 of 5)	intron (NM_001033306, intron 2 of 5)	-60402	NM_001009949	230125	Mm.260210	NM_001009949	ENSMUSG00000045973	Slc25a51	9130208E07Rik|D130005A03Rik|Gm138|Mcart1	solute carrier family 25, member 51	protein-coding
common_peak1-12445-22-21-0.187852486450107-0.376654945067947	chr17	80206747	80207595	+	0	NA	Intergenic	RLTR41|LTR|ERV1	88292	NM_178050	56298	Mm.175403	NM_019717	ENSMUSG00000059811	Atl2	2010110I21Rik|AA407293|AV334690|Aip-2|Arl6ip2	atlastin GTPase 2	protein-coding
unique_peak1-5288-12-4-1.32684789020028-2.04196296489515	chr5	66259780	66260412	+	0	NA	intron (NM_001081105, intron 1 of 2)	PB1D10|SINE|Alu	5288	NM_001081105	74734	Mm.20323	NM_001081105	ENSMUSG00000029204	Rhoh	5830400A04Rik|AU019774|Arhh	ras homolog gene family, member H	protein-coding
common_peak2-20375-8-20--1.38709500483119-1.45476480588849	chr10	14704935	14705629	+	0	NA	Intergenic	RLTR45|LTR|ERVK	225187	NM_008703	18101	Mm.487342	NM_008703	ENSMUSG00000019865	Nmbr	BB182387	neuromedin B receptor	protein-coding
common_peak2-21070-20-28--0.369906210536379-0.457753417732779	chr11	49046856	49047636	+	0	NA	Intergenic	Intergenic	-10447	NM_010794	17308	Mm.196933	NM_010794	ENSMUSG00000020346	Mgat1	Mgat-1	mannoside acetylglucosaminyltransferase 1	protein-coding
common_peak1-10187-15-11-0.4272022498345-0.503257505534083	chr13	42108070	42108779	+	0	NA	Intergenic	Intergenic	-38966	NM_007772	110521	Mm.4808	NM_007772	ENSMUSG00000021366	Hivep1	Cryabp1	human immunodeficiency virus type I enhancer binding protein 1	protein-coding
unique_peak2-35188-6-13--1.2419568116773-1.58711810488664	chr16	57230990	57231505	+	0	NA	intron (NM_026254, intron 1 of 17)	intron (NM_026254, intron 1 of 17)	332	NM_026254	67581	Mm.257819	NM_026254	ENSMUSG00000022749	Tbc1d23	4930451A13Rik|AU015720|AU043671|AU043778|D030022P07Rik|W51689	TBC1 domain family, member 23	protein-coding
common_peak1-13067-9-6-0.382258484346616-1.11707584880836	chr19	6275585	6275985	+	0	NA	Intergenic	Intergenic	-1111	NM_010119	13660	Mm.30169	NM_010119	ENSMUSG00000024772	Ehd1	AA409636|Past1|RME-1	EH-domain containing 1	protein-coding
common_peak1-15841-8-6-0.197867495889966-1.03789460276074	chr5	146914914	146915429	+	0	NA	intron (NM_001105160, intron 10 of 12)	intron (NM_001105160, intron 10 of 12)	24337	NM_001105160	100041449	Mm.301900	NM_001105160	ENSMUSG00000061292	Cyp3a59	ENSMUSG00000061292	cytochrome P450, family 3, subfamily a, polypeptide 59	protein-coding
common_peak1-18609-14-26--0.855671341805824-0.949797625454538	chr8	107150405	107151141	+	0	NA	Intergenic	GA-rich|Low_complexity|Low_complexity	-2477	NM_001252628	12556	Mm.19423	NM_007663	ENSMUSG00000031881	Cdh16	-	cadherin 16	protein-coding
unique_peak2-33069-8-17--1.16470258349474-1.02063122982878	chr10	78525201	78526194	+	0	NA	Intergenic	Intergenic	28229	NM_147041	18357	Mm.246544	NM_147041	ENSMUSG00000060205	Olfr57	IF12|MOR139-3	olfactory receptor 57	protein-coding
common_peak2-23199-455-565-0.730159343379762-20.7097619016953	chr15	85667139	85672469	+	0	NA	intron (NM_001033337, intron 5 of 13)	intron (NM_001033337, intron 5 of 13)	7070	NM_001033337	239570	Mm.151748	NM_001033337	ENSMUSG00000035944	Ttc38	9030019H09	tetratricopeptide repeat domain 38	protein-coding
unique_peak2-39988-1-9--2.94898510510411-2.31132995230379	chrX	159532802	159533282	+	0	NA	Intergenic	Intergenic	-130511	NM_009789	12309	Mm.6891	NM_009789	ENSMUSG00000040808	S100g	AU042539|CABP1|CaBP-D9K|Cabp9k|Calb3	S100 calcium binding protein G	protein-coding
unique_peak2-36901-5-23--2.28934283672701-3.02403524675804	chr3	96246764	96247355	+	0	NA	intron (NM_001256180, intron 1 of 4)	intron (NM_001256180, intron 1 of 4)	9170	NM_001256181	329716	Mm.275223	NM_183223	ENSMUSG00000046317	BC107364	D730018G16	cDNA sequence BC107364	protein-coding
common_peak1-9830-20-21-0.0286431659538957-0.306080386793804	chr12	75596347	75597125	+	0	NA	Intergenic	Intergenic	198275	NM_198866	386753	Mm.341686	NM_198866	ENSMUSG00000029878	Dbpht2	Spot2	DNA binding protein with his-thr domain	protein-coding
unique_peak2-33172-5-6--0.511735258063458-0.947717972411649	chr10	95337025	95337372	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	-66099	NM_001001932	216238	Mm.210035	NM_001001932	ENSMUSG00000036499	Eea1	A430109M19Rik|B230358H09Rik|ZFYVE2	early endosome antigen 1	protein-coding
unique_peak1-6374-12-4-1.32684789020028-2.04196296489515	chr7	70354405	70355143	+	0	NA	intron (NM_007390, intron 2 of 9)	intron (NM_007390, intron 2 of 9)	2638	NM_007390	11441	Mm.113464	NM_007390	ENSMUSG00000030525	Chrna7	Acra7|alpha7	cholinergic receptor, nicotinic, alpha polypeptide 7	protein-coding
unique_peak2-32902-4-6--0.830815435910851-0.989110657569874	chr10	19046618	19047035	+	0	NA	Intergenic	MTE2a|LTR|MaLR	-29519	NM_053008	94222	Mm.156946	NM_053008	ENSMUSG00000045591	Olig3	Bhlhb7|bHLHe20	oligodendrocyte transcription factor 3	protein-coding
unique_peak1-3806-10-0-3.35641534500877-3.31132995230379	chr2	163577786	163578362	+	0	NA	Intergenic	Intergenic	-2099	NM_001272052	11486	Mm.388	NM_007398	ENSMUSG00000017697	Ada	-	adenosine deaminase	protein-coding
unique_peak2-33909-5-5--0.289342836727009-0.909929411522249	chr12	59199227	59199650	+	0	NA	Intergenic	L1Md_F3|LINE|L1	-113353	NM_009216	20605	Mm.278336	NM_009216		Sstr1	SRIF-2|SS-1-R|SS1-R|SS1R|Smstr-1|Smstr1|sst1	somatostatin receptor 1	protein-coding
common_peak2-22257-20-40--0.869477220026891-1.45230360914611	chr13	4770956	4771777	+	0	NA	Intergenic	Intergenic	-162956	NM_018859	56043	Mm.251908	NM_018859	ENSMUSG00000045410	Akr1e1	1810061I10Rik|Akr1e2	aldo-keto reductase family 1, member E1	protein-coding
unique_peak2-36079-9-12--0.510826311736872-0.394412252720706	chr19	55643334	55643962	+	0	NA	intron (NM_001293686, intron 7 of 7)	intron (NM_001293686, intron 7 of 7)	133046	NR_045318	77594	Mm.329924	NR_045318	ENSMUSG00000097632	4930552P12Rik	-	RIKEN cDNA 4930552P12 gene	ncRNA
unique_peak1-3695-11-4-1.18676548936425-1.68134727924692	chr19	43659156	43659897	+	0	NA	Intergenic	Intergenic	-27289	NM_008699	18089	Mm.56994	NM_008699	ENSMUSG00000044220	Nkx2-3	Nkx-2.3|Nkx2.3|tinman	NK2 homeobox 3	protein-coding
unique_peak2-37489-4-9--1.34538860874061-1.36011389749466	chr5	5370563	5370986	+	0	NA	intron (NM_011074, intron 2 of 14)	intron (NM_011074, intron 2 of 14)	9477	NM_011074	18647	Mm.389061	NM_011074	ENSMUSG00000028926	Cdk14	Pftk1|mKIAA0834	cyclin-dependent kinase 14	protein-coding
common_peak2-28211-11-9-0.186765489364251-0.344532117358383	chr4	117886928	117887323	+	0	NA	intron (NM_011213, intron 22 of 32)	ID_B1|SINE|B4	-3956	NR_106085	102466820		NR_106085		Mir7226	mmu-mir-7226	microRNA mir-7226	ncRNA
unique_peak2-36234-3-7--1.41398308995928-1.23214870625617	chr2	36216840	36217254	+	0	NA	Intergenic	Intergenic	-15251	NM_146947	258949	Mm.377765	NM_146947	ENSMUSG00000068950	Olfr338	MOR136-5	olfactory receptor 338	protein-coding
common_peak1-12672-32-29-0.372201423611141-0.621525249893804	chr18	36734872	36735782	+	0	NA	intron (NM_175375, intron 2 of 33)	B2_Mm2|SINE|B2	15070	NM_175375	108857	Mm.482287	NM_175375	ENSMUSG00000024483	Ankhd1	1110004O12Rik|4933432B13Rik|9130019P20Rik|A530027J04Rik|A630021B20Rik|AA571404|Mask|mFLJ00246|mKIAA1085	ankyrin repeat and KH domain containing 1	protein-coding
common_peak1-17765-11-11--0.0762689164695427-0.301029995663976	chr7	90302314	90302899	+	0	NA	Intergenic	RLTR11A2|LTR|ERVK	-182705	NR_045855	71285	Mm.76818	NR_045855		4933430H16Rik	-	RIKEN cDNA 4933430H16 gene	ncRNA
unique_peak2-38659-7-7--0.200909169701811-0.97990265578305	chr7	97696711	97697067	+	0	NA	Intergenic	Intergenic	-72384	NM_026734	68472	Mm.289791	NM_026734		Tmem126b	1110001A23Rik	transmembrane protein 126B	protein-coding
common_peak2-27076-47-49-0.290985234991823-0.585862008351098	chr3	30981062	30982340	+	0	NA	Intergenic	Intergenic	-12279	NM_011386	20482	Mm.15406	NM_011386	ENSMUSG00000027660	Skil	Skir|SnoN|sno	SKI-like	protein-coding
unique_peak1-5731-9-0-3.18961340640422-3.01029995663981	chr6	43383328	43383831	+	0	NA	intron (NM_013861, intron 7 of 8)	Lx3_Mus|LINE|L1	-8849	NR_045988	319812	Mm.446393	NR_045988		9430018G01Rik	-	RIKEN cDNA 9430018G01 gene	ncRNA
unique_peak1-4446-19-4-2.08075923177432-3.05312482518673	chr2	170469732	170470617	+	0	NA	Intergenic	Intergenic	-42657	NR_027825	67637	Mm.158163	NM_026287	ENSMUSG00000043583	4930470P17Rik	-	RIKEN cDNA 4930470P17 gene	ncRNA
common_peak1-15116-13-7-0.778472030637769-0.817533494790411	chr3	136671277	136672109	+	0	NA	Intergenic	Intergenic	-332349	NM_001163522	59308	Mm.27343	NM_016885	ENSMUSG00000054690	Emcn	0610012K22Rik|AI315669|Muc14	endomucin	protein-coding
unique_peak2-35505-8-13--0.802132504110034-0.562038191119711	chr17	46879952	46880502	+	0	NA	exon (NM_028065, exon 3 of 6)	exon (NM_028065, exon 3 of 6)	8934	NM_028065	72029	Mm.240325	NM_028065	ENSMUSG00000023973	Cnpy3	1600025D17Rik|2410050O22Rik|AI413153|CAG4A|ERDA5|PRAT4A|Tnrc5	canopy 3 homolog (zebrafish)	protein-coding
common_peak2-30349-5-8--0.874305337448166-1.10484139239135	chr7	27472345	27472767	+	0	NA	Intergenic	RMER13A|LTR|ERVK	-1107	NM_001081148	243881	Mm.294678	NM_001081148	ENSMUSG00000040650	Cyp2b23	EG243881	cytochrome P450, family 2, subfamily b, polypeptide 23	protein-coding
common_peak2-27594-9-17--0.980311595038092-0.844317084070804	chr3	102742713	102743271	+	0	NA	TTS (NM_201622)	TTS (NM_201622)	-2969	NM_011516	20957	Mm.243849	NM_011516	ENSMUSG00000027855	Sycp1	SCP1	synaptonemal complex protein 1	protein-coding
unique_peak1-7202-13-4-1.45654393575041-2.23384849113406	chr9	66621137	66621717	+	0	NA	Intergenic	Intergenic	21803	NM_177583	208117	Mm.41291	NM_177583	ENSMUSG00000032375	Aph1b	2310057K14Rik|Aph1c	anterior pharynx defective 1b homolog (C. elegans)	protein-coding
unique_peak1-4710-12-3-1.64877598508764-2.36932189928148	chr3	102752662	102753276	+	0	NA	exon (NM_201622, exon 7 of 11)	exon (NM_201622, exon 7 of 11)	-12946	NM_011516	20957	Mm.243849	NM_011516	ENSMUSG00000027855	Sycp1	SCP1	synaptonemal complex protein 1	protein-coding
common_peak2-23098-22-17-0.477359103645092-0.633951497070961	chr14	76818016	76818991	+	0	NA	exon (NM_207652, exon 1 of 3)	exon (NM_207652, exon 1 of 3)	2875	NM_207652	21807	Mm.153272	NM_009366	ENSMUSG00000022010	Tsc22d1	AA589566|AW105905|Egr5|TSC-22|Tgfb1i4|Tsc|Tsc22	TSC22 domain family, member 1	protein-coding
unique_peak1-1880-11-5-0.923731083530457-1.477227296591	chr14	60741260	60741798	+	0	NA	Intergenic	Intergenic	-35858	NM_015803	50769	Mm.319599	NM_015803	ENSMUSG00000021983	Atp8a2	AI415030|Atpc1b|wl	ATPase, aminophospholipid transporter-like, class I, type 8A, member 2	protein-coding
common_peak2-30684-28-33--0.0345037214288766-0.301029995664001	chr7	109519190	109519985	+	0	NA	intron (NM_009287, intron 2 of 11)	intron (NM_009287, intron 2 of 11)	-70622	NM_009103	20133	Mm.197486	NM_009103	ENSMUSG00000030978	Rrm1	RnrM1	ribonucleotide reductase M1	protein-coding
unique_peak2-36629-1-5--2.2120195109379-1.32905871926422	chr3	3550383	3550783	+	0	NA	intron (NM_013920, intron 1 of 9)	(TTTC)n|Simple_repeat|Simple_repeat	42553	NM_013920	30942	Mm.330897	NM_013920	ENSMUSG00000017688	Hnf4g	NR2A2	hepatocyte nuclear factor 4, gamma	protein-coding
unique_peak1-6295-8-1-2.00522241794757-2.05605744720049	chr7	29768572	29769016	+	0	NA	intron (NM_008279, intron 3 of 31)	intron (NM_008279, intron 3 of 31)	921	NM_008279	26411	Mm.148278	NM_008279	ENSMUSG00000037337	Map4k1	Hpk1|mHPK1	mitogen-activated protein kinase kinase kinase kinase 1	protein-coding
common_peak2-22396-8-11--0.579740082773585-1.14218153353838	chr13	32963547	32963922	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-20680	NM_025429	66222	Mm.20144	NM_025429	ENSMUSG00000044734	Serpinb1a	1190005M04Rik|AI325983|EI|EIA|ELANH2|LEI|M/NEI|MNEI|PI2	serine (or cysteine) peptidase inhibitor, clade B, member 1a	protein-coding
unique_peak1-5416-9-1-2.18961340640422-2.31132995230379	chr5	110284373	110284901	+	0	NA	Intergenic	Cheshire|DNA|MER1_type	-21476	NR_027964	667213	Mm.454429	NR_027964		Gm10416	EG667213|ENSMUSG00000072761	zinc finger protein pseudogene	pseudo
common_peak2-28050-15-20--0.380152672223105-0.397739447719386	chr4	59003070	59003851	+	0	NA	Intergenic	Intergenic	-3510	NM_025968	67103	Mm.34497	NM_025968	ENSMUSG00000028378	Ptgr1	2510002C21Rik|Ltb4dh|Zadh3	prostaglandin reductase 1	protein-coding
common_peak2-31316-23-36--0.48768586111987-0.652802052802678	chr8	79294196	79295288	+	0	NA	intron (NR_028579, intron 1 of 1)	L1Md_F2|LINE|L1	129330	NR_028579	100039211	Mm.367571	NR_028579	ENSMUSG00000074235	Gm10649	ENSMUSG00000074235	predicted gene 10649	ncRNA
common_peak1-19255-13-17--0.391452970804544-0.364171515310935	chr9	110656387	110656910	+	0	NA	Intergenic	Intergenic	-6999	NM_011199	19228	Mm.3542	NM_011199	ENSMUSG00000032492	Pth1r	PPR|Pthr|Pthr1	parathyroid hormone 1 receptor	protein-coding
common_peak2-29293-45-37-0.612430511901287-1.31742449843083	chr5	144221505	144222679	+	0	NA	Intergenic	MYSERV6-int|LTR|ERVK	-3269	NM_144915	231871	Mm.469963	NM_144915	ENSMUSG00000039206	Daglb	E330036I19Rik	diacylglycerol lipase, beta	protein-coding
common_peak1-13513-31-31-0.225238670813123-0.416139936131877	chr2	101678155	101679305	+	0	NA	intron (NM_001110849, intron 1 of 9)	intron (NM_001110849, intron 1 of 9)	407	NM_001110849	72446	Mm.24138	NM_175181	ENSMUSG00000032841	Prr5l	2600010E01Rik|4833411O04Rik|Protor-2|Protor2	proline rich 5 like	protein-coding
unique_peak2-35591-4-6--0.830815435910851-0.989110657569874	chr17	78199688	78200073	+	0	NA	Intergenic	Intergenic	-399708	NM_015800	50766	Mm.311912	NM_015800	ENSMUSG00000024074	Crim1	AU015004	cysteine rich transmembrane BMP regulator 1 (chordin like)	protein-coding
common_peak2-29728-29-35--0.0576349208272013-0.301029995663967	chr6	84600607	84601723	+	0	NA	intron (NM_177077, intron 20 of 21)	RMER4A|LTR|ERVK	-57263	NM_001177713	232174	Mm.255246	NM_175475	ENSMUSG00000063415	Cyp26b1	CP26|P450RAI-2	cytochrome P450, family 26, subfamily b, polypeptide 1	protein-coding
common_peak2-20835-16-15-0.118263642268062-0.328191099940264	chr11	9010538	9011321	+	0	NA	Intergenic	B1_Mur3|SINE|Alu	-7082	NM_001159401	22271	Mm.4610	NM_009477	ENSMUSG00000020407	Upp1	AI325217|UPase|UdRPase|Up|Upp	uridine phosphorylase 1	protein-coding
unique_peak1-6317-8-2-1.42025991722641-1.65811743852845	chr7	44836234	44836765	+	0	NA	Intergenic	Intergenic	1683405	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak1-12269-28-29-0.146068524212944-0.357106932979091	chr17	42981952	42983053	+	0	NA	intron (NM_009847, intron 2 of 17)	intron (NM_009847, intron 2 of 17)	30871	NM_009847	12488	Mm.218637	NM_009847	ENSMUSG00000061665	Cd2ap	AL024079|C78928|METS-1|Mets1	CD2-associated protein	protein-coding
unique_peak2-39626-4-11--1.6084230145744-1.68134727924692	chr9	95857688	95858294	+	0	NA	intron (NM_011916, intron 1 of 41)	B3|SINE|B2	2812	NM_011916	24127	Mm.291179	NM_011916	ENSMUSG00000032410	Xrn1	Dhm2|exo|mXrn1	5'-3' exoribonuclease 1	protein-coding
unique_peak2-38311-10-15--0.643584654991231-0.519648556297791	chr6	143099356	143100032	+	0	NA	Intergenic	Intergenic	-16056	NM_029250	75320	Mm.272548	NM_029250	ENSMUSG00000030275	Etnk1	1110061E11Rik|4930555L11Rik|AI195356|AI841245|C80956|D6Ertd3e|EKI1	ethanolamine kinase 1	protein-coding
common_peak2-24230-15-13-0.204809828498052-0.368541233333383	chr16	87440237	87440848	+	0	NA	intron (NM_016924, intron 1 of 4)	CpG	295	NM_016924	53858	Mm.162406	NM_016924	ENSMUSG00000041079	Rwdd2b	ORF5	RWD domain containing 2B	protein-coding
common_peak2-31083-8-5-0.420259917226415-1.10484139239135	chr8	25010967	25011385	+	0	NA	intron (NM_001277239, intron 4 of 7)	intron (NM_001277239, intron 4 of 7)	231043	NM_177086	320158	Mm.121274	NM_177086	ENSMUSG00000037492	Zmat4	9630048M01Rik	zinc finger, matrin type 4	protein-coding
common_peak1-11116-20-9-1.16614668970383-1.52222891542741	chr15	62391643	62392519	+	0	NA	Intergenic	Intergenic	-341075	NR_003523	67552	Mm.484027	NM_026230		H2afy3	4933432H23Rik	H2A histone family, member Y3	pseudo
unique_peak2-37676-2-9--2.23938235115068-1.87199725847353	chr5	96220819	96221263	+	0	NA	promoter-TSS (NM_001167793).4	promoter-TSS (NM_001167793).4	-617	NM_001167793	100041354	Mm.422721	NM_001122678	ENSMUSG00000079423	Gm3286	-	predicted gene 3286	protein-coding
common_peak2-23441-34-34-0.2527855100563-0.484230028934922	chr15	62392509	62393637	+	0	NA	Intergenic	B4A|SINE|B4	-342067	NR_003523	67552	Mm.484027	NM_026230		H2afy3	4933432H23Rik	H2A histone family, member Y3	pseudo
common_peak2-23818-102-126-0.282403790067389-0.910059699385623	chr15	101245525	101247599	+	0	NA	intron (NM_033073, intron 2 of 8)	intron (NM_033073, intron 2 of 8)	3728	NM_033073	110310	Mm.486285	NM_033073		Krt7	D15Wsu77e|K7|Krt2-7	keratin 7	protein-coding
unique_peak1-1867-23-4-2.39983940962172-4.21583923654667	chr14	55822799	55823811	+	0	NA	Intergenic	Lx7|LINE|L1	-17539	NM_027790	71412	Mm.85484	NM_027790	ENSMUSG00000022209	Dhrs2	5430405K24Rik|Hep27	dehydrogenase/reductase member 2	protein-coding
unique_peak1-7172-7-1-1.79909083029819-1.80617997398389	chr9	60975977	60976462	+	0	NA	Intergenic	Intergenic	-10103	NR_045705	619328	Mm.325722	NR_045705		I730028E13Rik	-	RIKEN cDNA I730028E13 gene	ncRNA
unique_peak2-35005-4-8--1.19338551529556-1.21878474469819	chr15	99890776	99891136	+	0	NA	intron (NM_001159361, intron 1 of 37)	intron (NM_001159361, intron 1 of 37)	21861	NM_001159361	239667	Mm.243658	NM_172819	ENSMUSG00000023026	Dip2b	4932422C22|AI317237|AI854602|mKIAA1463	DIP2 disco-interacting protein 2 homolog B (Drosophila)	protein-coding
common_peak2-22397-15-9-0.690236655668294-0.732381977911291	chr13	33003382	33004001	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-13682	NM_173051	380839	Mm.250802	NM_173051		Serpinb1c	EIC|ovalbumin	serine (or cysteine) peptidase inhibitor, clade B, member 1c	protein-coding
common_peak2-32085-98-137-0.0932442366523816-0.377506099285453	chr9	96751556	96753638	+	0	NA	intron (NM_001289646, intron 3 of 6)	intron (NM_001289646, intron 3 of 6)	37296	NM_001289646	235534	Mm.233031	NM_153420	ENSMUSG00000043587	Pxylp1	9430094M07Rik|Acpl2|BB177120|C130099A20Rik	2-phosphoxylose phosphatase 1	protein-coding
unique_peak2-37308-1-11--3.2120195109379-2.83420869758413	chr4	123916862	123917252	+	0	NA	Intergenic	Intergenic	246145	NR_040774	78460	Mm.452060	NR_040774		1700057H15Rik	-	RIKEN cDNA 1700057H15 gene	ncRNA
common_peak2-25541-4-10--1.48289213249054-1.5150158574804	chr19	6015482	6015884	+	0	NA	promoter-TSS (NM_007600)	promoter-TSS (NM_007600)	142	NM_001110504	12333	Mm.6221	NM_007600	ENSMUSG00000024942	Capn1	Capa-1|Capa1|mu-calpin	calpain 1	protein-coding
unique_peak2-35330-7-8--0.370834171144123-1.00793137938329	chr17	23192776	23193257	+	0	NA	Intergenic	L1Md_T|LINE|L1	51078	NR_033648	665976	Mm.491067	NR_033648		Vmn2r-ps129	-	vomeronasal 2, receptor, pseudogene 129	pseudo
common_peak2-24449-10-8-0.186490343566457-1.078512453669	chr17	22866874	22867180	+	0	NA	Intergenic	Lx5|LINE|L1	87687	NR_030709	100042679	Mm.484007	NR_030709		Gm16386	EG545191|ENSMUSG00000073442|Gm21017	zinc finger protein 946 pseudogene	pseudo
common_peak2-21919-121-184-0.0359843213616866-0.321932765805439	chr12	16893387	16895847	+	0	NA	Intergenic	Intergenic	-7167	NM_009072	19878	Mm.276024	NM_009072	ENSMUSG00000020580	Rock2	B230113H15Rik|ROKalpha|Rho-kinase|Rock-II|Rock2m|mKIAA0619	Rho-associated coiled-coil containing protein kinase 2	protein-coding
unique_peak2-36174-11-34--1.62058943269335-2.97841939682983	chr2	28939345	28940423	+	0	NA	intron (NM_009442, intron 10 of 11)	B4A|SINE|B4	24101	NM_009442	22130	Mm.252195	NM_009442	ENSMUSG00000026803	Ttf1	AV245725|TTF-1|TTF-I	transcription termination factor, RNA polymerase I	protein-coding
unique_peak1-2286-6-2-0.980435609659146-1.26211192963361	chr15	79933559	79934031	+	0	NA	intron (NM_207708, intron 1 of 3)	intron (NM_207708, intron 1 of 3)	12031	NM_207708	20972	Mm.230301	NM_009303	ENSMUSG00000022415	Syngr1	R75468|Syngr1b|p29	synaptogyrin 1	protein-coding
unique_peak1-131-6-7--0.434601889619698-0.97990265578305	chr1	64797145	64797665	+	0	NA	Intergenic	Intergenic	-13081	NM_022721	14367	Mm.150813	NM_022721	ENSMUSG00000045005	Fzd5	5330434N09Rik|AI427138|Fz-5|Fz5|mFz5	frizzled homolog 5 (Drosophila)	protein-coding
unique_peak1-1372-12-2-2.06381348436648-2.79529063155376	chr12	41087436	41087916	+	0	NA	intron (NM_172575, intron 5 of 12)	intron (NM_172575, intron 5 of 12)	84701	NM_172575	246196	Mm.26852	NM_172575	ENSMUSG00000055917	Zfp277	2410017E24Rik|NIRF4	zinc finger protein 277	protein-coding
unique_peak1-4751-16-2-2.53330114154691-3.78760380288747	chr3	115647052	115647873	+	0	NA	3' UTR (NM_023214, exon 11 of 11)	3' UTR (NM_023214, exon 11 of 11)	56361	NM_027193	69740	Mm.5915	NM_027193	ENSMUSG00000033554	Dph5	2410012M04Rik|AU045680|C80186	DPH5 homolog (S. cerevisiae)	protein-coding
common_peak1-8063-12-9-0.326847890200276-0.459837087125828	chr1	173943135	173943648	+	0	NA	5' UTR (NM_033509, exon 2 of 8)	5' UTR (NM_033509, exon 2 of 8)	14008	NM_033509	93840	Mm.36148	NM_033509	ENSMUSG00000026556	Vangl2	C530001F03Rik|Lp|Lpp1|Ltap|Vang1l2|loop-tail|ska17|ska<m17Jus>|stbm|strabismus	vang-like 2 (van gogh, Drosophila)	protein-coding
common_peak2-27303-20-56--1.34481522957355-3.62981913803281	chr3	61364602	61365971	+	0	NA	Intergenic	L1_Mur3|LINE|L1	196857	NM_028712	74012	Mm.422674	NM_028712	ENSMUSG00000036894	Rap2b	4021402C18Rik|AA408554	RAP2B, member of RAS oncogene family	protein-coding
common_peak2-26801-28-31-0.0529591198214625-0.314603908022751	chr2	148856794	148857756	+	0	NA	Intergenic	RMER16-int|LTR|ERVK	-156071	NM_009976	13010	Mm.4263	NM_009976	ENSMUSG00000027447	Cst3	CysC	cystatin C	protein-coding
common_peak1-13161-55-67-0.117157029902363-0.376523540924376	chr19	10688364	10689885	+	0	NA	intron (NM_015735, intron 8 of 26)	B1_Mus1|SINE|Alu	9009	NM_015735	13194	Mm.289915	NM_015735	ENSMUSG00000024740	Ddb1	127kDa|AA408517|p127-Ddb1	damage specific DNA binding protein 1	protein-coding
unique_peak1-4391-12-2-2.06381348436648-2.79529063155376	chr2	164496994	164497599	+	0	NA	intron (NM_001161806, intron 1 of 4)	MTEa|LTR|MaLR	2291	NM_001161806	629761	Mm.389336	NM_001161806	ENSMUSG00000078940	Wfdc11	-	WAP four-disulfide core domain 11	protein-coding
common_peak1-12986-38-25-0.871012941157439-1.90173050117047	chr19	4169573	4170721	+	0	NA	intron (NM_134148, intron 7 of 9)	intron (NM_134148, intron 7 of 9)	5332	NM_134148	107239	Mm.482310	NM_134148	ENSMUSG00000075289	Carns1	AI790298|Atpgd1|mKIAA1394	carnosine synthase 1	protein-coding
common_peak1-11465-30-24-0.525819219717149-0.825714541185123	chr15	101927172	101928456	+	0	NA	TTS (NM_145625)	TTS (NM_145625)	-5605	NM_153533	209039	Mm.29389	NM_153533	ENSMUSG00000037003	Tenc1	C1-ten|nep|nph	tensin like C1 domain-containing phosphatase	protein-coding
common_peak1-13644-9-23--1.39534909431694-1.67711336403294	chr2	26139871	26140468	+	0	NA	intron (NM_177841, intron 4 of 9)	B1_Mur4|SINE|Alu	9908	NM_177841	329366	Mm.77712	NM_177841	ENSMUSG00000048038	4932418E24Rik	-	RIKEN cDNA 4932418E24 gene	protein-coding
common_peak2-31362-40-61--0.295220627635777-0.495169887621129	chr8	84831787	84832805	+	0	NA	Intergenic	Intergenic	94189	NM_001254747	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
unique_peak1-4722-33-13-1.52398264046792-3.43266191012053	chr3	104541333	104542728	+	0	NA	Intergenic	Intergenic	38435	NM_183224	329731	Mm.389494	NM_183224	ENSMUSG00000055865	Fam19a3	7530404M11Rik|TAFA3|Tafa-3	family with sequence similarity 19, member A3	protein-coding
unique_peak2-36625-7-14--1.10779976531033-0.817533494790411	chr3	89177470	89178199	+	0	NA	Intergenic	PB1D9|SINE|Alu	-8673	NM_029974	77772	Mm.164013	NM_029974	ENSMUSG00000042672	Dcst1	A330106H01Rik	DC-STAMP domain containing 1	protein-coding
unique_peak1-3054-15-1-3.01216475055566-4.18809100057339	chr18	7288299	7289035	+	0	NA	intron (NM_001081393, intron 3 of 20)	intron (NM_001081393, intron 3 of 20)	9232	NM_001081393	74934	Mm.107918	NM_001081393	ENSMUSG00000061802	Armc4	4930463I21Rik|b2b227.1Clo|b2b643Clo	armadillo repeat containing 4	protein-coding
common_peak2-20413-10-8-0.186490343566457-1.078512453669	chr10	25927588	25928083	+	0	NA	Intergenic	RodERV21-int|LTR|ERV1	-21678	NM_001013766	268288	Mm.213322	NM_001013766	ENSMUSG00000051354	Samd3	Gm623	sterile alpha motif domain containing 3	protein-coding
common_peak1-14513-45-109--0.921001688179788-3.73770049208073	chr3	22076589	22077500	+	0	NA	intron (NM_030732, intron 2 of 15)	intron (NM_030732, intron 2 of 15)	-73248	NR_004439	19784		NR_004439		Rprl2	RPRH3|Rmrp3	ribonuclease P RNA-like 2	ncRNA
common_peak1-9537-18-11-0.727956650507195-0.876666802405043	chr11	116142653	116143432	+	0	NA	exon (NM_010254, exon 1 of 2)	exon (NM_010254, exon 1 of 2)	789	NM_010254	14428	Mm.57149	NM_010254	ENSMUSG00000020793	Galr2	mGalR	galanin receptor 2	protein-coding
unique_peak1-4657-9-1-2.18961340640422-2.31132995230379	chr3	89878356	89878832	+	0	NA	intron (NM_001293748, intron 2 of 9)	intron (NM_001293748, intron 2 of 9)	2021	NM_022314	59069	Mm.240839	NM_022314	ENSMUSG00000027940	Tpm3	TM30nm|TMnm|Tm5NM|Tpm-5|Tpm5|Trop-5|gamma-TM|hTM30nm|hTMnm	tropomyosin 3, gamma	protein-coding
common_peak1-12946-33-17-1.16141256108322-2.37490429172804	chr19	38091560	38093123	+	0	NA	intron (NM_001099634, intron 3 of 52)	RMER12|LTR|ERVK	25726	NM_001099634	226101	Mm.34674	NM_177035	ENSMUSG00000048612	Myof	2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3	myoferlin	protein-coding
common_peak1-17627-41-25-1.00070898670757-2.40122790931992	chr7	45872802	45874170	+	0	NA	Intergenic	Intergenic	646418	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak1-12529-13-22--0.745089925419244-0.690311289528838	chr18	75005888	75006481	+	0	NA	Intergenic	Intergenic	67318	NM_177470	52538	Mm.245724	NM_177470	ENSMUSG00000036880	Acaa2	0610011L04Rik|AI255831|AI265397|D18Ertd240e	acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase)	protein-coding
common_peak1-19173-122-150-0.343247617636909-1.42388501098108	chr9	96751653	96754601	+	0	NA	intron (NM_001289646, intron 3 of 6)	intron (NM_001289646, intron 3 of 6)	36766	NM_001289646	235534	Mm.233031	NM_153420	ENSMUSG00000043587	Pxylp1	9430094M07Rik|Acpl2|BB177120|C130099A20Rik	2-phosphoxylose phosphatase 1	protein-coding
common_peak1-14931-77-67-0.697063738305658-2.592278230509	chr3	101516060	101517670	+	0	NA	Intergenic	Intergenic	-108235	NM_144900	11928	Mm.280103	NM_144900	ENSMUSG00000033161	Atp1a1	Atpa-1|BC010319	ATPase, Na+/K+ transporting, alpha 1 polypeptide	protein-coding
common_peak2-29726-67-40-1.18685947816491-5.01706503898554	chr6	84314960	84316561	+	0	NA	Intergenic	Intergenic	58072	NR_046063	100038556	Mm.387783	NR_046063		Gm10445	ENSMUSG00000072956	predicted gene 10445	ncRNA
unique_peak1-5118-8-5-0.420259917226415-1.10484139239135	chr5	31571719	31572201	+	0	NA	intron (NM_026298, intron 18 of 47)	B1_Mur3|SINE|Alu	17881	NM_027221	69815	Mm.389609	NM_027221	ENSMUSG00000029149	Krtcap3	2010001C09Rik|AW321088|Kcp3	keratinocyte associated protein 3	protein-coding
unique_peak1-3060-13-2-2.19350952991661-3.03832868024006	chr18	9504951	9505566	+	0	NA	Intergenic	Intergenic	-55110	NM_026484	67974	Mm.86523	NM_026484	ENSMUSG00000024286	Ccny	1700025H17Rik|3110050L10Rik|4631402G10Rik|5730405I09Rik	cyclin Y	protein-coding
common_peak2-21333-41-63--0.29885129515134-0.529856340941694	chr11	75679199	75680241	+	0	NA	intron (NM_029548, intron 4 of 7)	intron (NM_029548, intron 4 of 7)	44841	NM_029548	380714	Mm.425697	NM_029548	ENSMUSG00000020847	Rph3al	Gm1753|Noc2	rabphilin 3A-like (without C2 domains)	protein-coding
unique_peak1-89-9-8-0.0196884049619079-1.03275496310833	chr1	43474696	43475206	+	0	NA	Intergenic	Intergenic	-27645	NM_010879	17974	Mm.389903	NM_010879	ENSMUSG00000066877	Nck2	4833426I10Rik|Grb4|NCKbeta|Nck-2	non-catalytic region of tyrosine kinase adaptor protein 2	protein-coding
common_peak2-21244-10-10--0.103016273628528-0.301029995663987	chr11	68871551	68872033	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-1485	NM_028005	71923	Mm.340257	NM_028005	ENSMUSG00000045176	2310047M10Rik	-	RIKEN cDNA 2310047M10 gene	protein-coding
common_peak1-17855-10-18--0.891512168434816-0.804350088532826	chr7	112696519	112697029	+	0	NA	Intergenic	Intergenic	-6100	NM_011421	20597	Mm.4628	NM_011421	ENSMUSG00000037049	Smpd1	A-SMase|ASM|Zn-SMase|aSMase	sphingomyelin phosphodiesterase 1, acid lysosomal	protein-coding
unique_peak2-35675-3-9--1.73591118484664-1.57096726280955	chr18	12168119	12168555	+	0	NA	intron (NM_178801, intron 13 of 14)	intron (NM_178801, intron 13 of 14)	111709	NR_110356	338363	Mm.271567	NM_178801	ENSMUSG00000049411	Tmem241	6030446N20Rik	transmembrane protein 241	protein-coding
common_peak2-28841-32-48--0.335617824895548-0.503563708672202	chr5	69556718	69557606	+	0	NA	intron (NM_175519, intron 1 of 1)	Lx3_Mus|LINE|L1	175786	NM_175519	243043	Mm.234821	NM_175519	ENSMUSG00000037653	Kctd8	A730087N02Rik	potassium channel tetramerisation domain containing 8	protein-coding
unique_peak2-36610-14-16--0.188246680892695-0.308035960714963	chr2	180224342	180225047	+	0	NA	Intergenic	Intergenic	-9987	NM_018766	18216	Mm.301712	NM_018766	ENSMUSG00000027568	Ntsr1	NT-1R|NTR-1|NTR1	neurotensin receptor 1	protein-coding
common_peak1-13073-112-173--0.00969319552844539-0.301029995663945	chr19	6362725	6364736	+	0	NA	promoter-TSS (NM_011750)	promoter-TSS (NM_011750)	40	NR_122118	22668	Mm.256422	NM_011750	ENSMUSG00000024949	Sf1	BBP|MZFM|WBP4|Zfp162	splicing factor 1	protein-coding
common_peak1-9958-32-19-0.957163924332297-1.82978420966174	chr12	111943419	111944931	+	0	NA	Intergenic	RLTR14|LTR|ERV1	-9570	NM_010480	15519	Mm.1843	NM_010480	ENSMUSG00000021270	Hsp90aa1	86kDa|89kDa|AL024080|AL024147|Hsp86-1|Hsp89|Hsp90|Hspca|hsp4	heat shock protein 90, alpha (cytosolic), class A member 1	protein-coding
unique_peak1-6148-16-7-1.11826364226806-1.23399803405144	chr6	135325613	135326482	+	0	NA	intron (NM_001288627, intron 1 of 4)	intron (NM_001288627, intron 1 of 4)	8536	NM_001288627	13730	Mm.182785	NM_010128	ENSMUSG00000030208	Emp1	I-8-09|TMP	epithelial membrane protein 1	protein-coding
common_peak1-12248-170-231-0.300291504522563-1.57397980436551	chr17	35915904	35919510	+	0	NA	TTS (NR_045459)	TTS (NR_045459)	8312	NR_045459	74601	Mm.410840	NR_045459	ENSMUSG00000092171	4833427F10Rik	-	RIKEN cDNA 4833427F10 gene	ncRNA
unique_peak1-4714-12-7-0.648775985087639-0.697979855752659	chr3	103801603	103802304	+	0	NA	intron (NM_001163467, intron 13 of 18)	intron (NM_001163467, intron 13 of 18)	-29714	NR_030676	100125931	Mm.400392	NR_030676	ENSMUSG00000089998	Phtf1os	A130049A11Rik	putative homeodomain transcription factor 1, opposite strand	ncRNA
common_peak1-9567-36-13-1.67196616411015-4.35777281740387	chr11	117949171	117950222	+	0	NA	intron (NM_001167746, intron 34 of 80)	intron (NM_001167746, intron 34 of 80)	40837	NM_001167746	69926	Mm.473893	NM_001167746	ENSMUSG00000033987	Dnah17	2810003K23Rik|Dnahc17|Dnahcl1|Gm1178|mKIAA3028	dynein, axonemal, heavy chain 17	protein-coding
common_peak2-30786-38-73--0.63800070633042-1.43077784553669	chr7	126799401	126800687	+	0	NA	intron (NM_054094, intron 10 of 13)	intron (NM_054094, intron 10 of 13)	-33496	NM_178414	233801	Mm.240412	NM_178414	ENSMUSG00000047026	Acsm4	O-MACS|OMACS	acyl-CoA synthetase medium-chain family member 4	protein-coding
common_peak2-30312-15-19--0.309763344331706-0.356936432242222	chr7	24207722	24208342	+	0	NA	intron (NM_001039143, intron 8 of 14)	URR1A|DNA|MER1_type	37116	NM_011860	23968	Mm.333653	NM_011860	ENSMUSG00000015721	Nlrp5	Mater|Nalp5|Op1|PAN11	NLR family, pyrin domain containing 5	protein-coding
unique_peak2-38970-7-8--0.370834171144123-1.00793137938329	chr8	34760217	34760606	+	0	NA	Intergenic	B3A|SINE|B2	-3299	NM_010344	14782	Mm.283573	NM_010344	ENSMUSG00000031584	Gsr	AI325518|D8Ertd238e|Gr-1|Gr1	glutathione reductase	protein-coding
common_peak2-22584-11-16--0.578769256998726-0.503257505534083	chr13	67683047	67683615	+	0	NA	Intergenic	L1Md_F2|LINE|L1	27313	NM_001163246	100416706	Mm.478045	NM_001163246	ENSMUSG00000058093	AA987161	AA987127	expressed sequence AA987161	protein-coding
common_peak2-27974-32-73--0.93036134640929-2.5780594337963	chr4	43381005	43382783	+	0	NA	intron (NM_177195, intron 24 of 28)	intron (NM_177195, intron 24 of 28)	-12960	NM_001037709	100213	Mm.235730	NM_199057	ENSMUSG00000035969	Rusc2	AI840675|mKIAA0375	RUN and SH3 domain containing 2	protein-coding
unique_peak1-4759-12-4-1.32684789020028-2.04196296489515	chr3	121794342	121794868	+	0	NA	intron (NM_007378, intron 11 of 49)	intron (NM_007378, intron 11 of 49)	47227	NM_007378	11304	Mm.3918	NM_007378	ENSMUSG00000028125	Abca4	AW050280|Abc10|Abcr|D430003I15Rik|RmP	ATP-binding cassette, sub-family A (ABC1), member 4	protein-coding
unique_peak2-36068-2-16--3.00491709751366-3.53487848679804	chr19	53449985	53450560	+	0	NA	TTS (NM_001008542)	TTS (NM_001008542)	14791	NM_172429	76479	Mm.313687	NM_172429	ENSMUSG00000025024	Smndc1	2410004J23Rik|4933440I19Rik	survival motor neuron domain containing 1	protein-coding
unique_peak1-370-9-1-2.18961340640422-2.31132995230379	chr1	143719684	143720310	+	0	NA	Intergenic	MTC|LTR|MaLR	-1167018	NR_040604	75910	Mm.483845	NR_040604		4930590L20Rik	-	RIKEN cDNA 4930590L20 gene	ncRNA
unique_peak1-2282-8-2-1.42025991722641-1.65811743852845	chr15	79370230	79370758	+	0	NA	intron (NM_001040187, intron 5 of 12)	intron (NM_001040187, intron 5 of 12)	6495	NM_199079	67040	Mm.29644	NM_152806	ENSMUSG00000055065	Ddx17	2610007K22Rik|A430025E01Rik|AI047725|C80929|Gm926|p72	DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	protein-coding
common_peak2-27498-29-42--0.313974674086987-0.439405572480898	chr3	94974461	94975332	+	0	NA	intron (NR_073550, intron 14 of 18)	intron (NR_073550, intron 14 of 18)	6635	NM_011351	20360	Mm.23662	NM_011351	ENSMUSG00000038777	Sema6c	Semay|mKIAA1869	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	protein-coding
common_peak2-28850-9-8-0.0196884049619079-1.03275496310833	chr5	73255208	73255627	+	0	NA	intron (NM_013689, intron 1 of 17)	intron (NM_013689, intron 1 of 17)	4270	NM_001113461	21682	Mm.319581	NM_013689	ENSMUSG00000029217	Tec	-	tec protein tyrosine kinase	protein-coding
unique_peak1-1313-15-2-2.4272022498345-3.53487848679804	chr11	120840516	120841238	+	0	NA	intron (NM_027874, intron 2 of 9)	intron (NM_027874, intron 2 of 9)	11770	NM_139059	104318	Mm.216227	NM_027874	ENSMUSG00000025162	Csnk1d	1200006A05Rik|AA409348|D930010H05Rik	casein kinase 1, delta	protein-coding
common_peak1-16272-47-39-0.612913329879185-1.36066917175235	chr5	108312143	108313632	+	0	NA	Intergenic	MTEb|LTR|MaLR	-8761	NM_007964	14020	Mm.35796	NM_007964	ENSMUSG00000011831	Evi5	NB4S	ecotropic viral integration site 5	protein-coding
common_peak1-16952-88-52-1.28749195460733-7.64588365713483	chr6	84314579	84317274	+	0	NA	Intergenic	Intergenic	57906	NR_046063	100038556	Mm.387783	NR_046063		Gm10445	ENSMUSG00000072956	predicted gene 10445	ncRNA
common_peak1-11804-14-15--0.100783839642355-0.301029995663982	chr16	57606643	57607250	+	0	NA	promoter-TSS (NM_025599)	promoter-TSS (NM_025599)	34	NM_025599	66497	Mm.425976	NM_025599		Cmss1	1110001A06Rik|2610528E23Rik|4930572F24Rik|AV099812|AV122629	cms small ribosomal subunit 1	protein-coding
common_peak2-22627-12-10-0.189344366450341-0.386243247519795	chr13	84221626	84222157	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-140010	NR_029418	72745	Mm.295063	NM_175187	ENSMUSG00000035762	Tmem161b	2810446P07Rik|AI843389	transmembrane protein 161B	protein-coding
common_peak2-22363-9-8-0.0196884049619079-1.03275496310833	chr13	28629480	28629889	+	0	NA	intron (NR_045053, intron 7 of 8)	L1_Mur3|LINE|L1	173058	NR_105787	102466635		NR_105787	miRBase:MI0021897	Mir6368	mmu-mir-6368	microRNA mir-6368	ncRNA
unique_peak2-38243-6-6--0.241956811677302-0.947717972411649	chr6	122602627	122603021	+	0	NA	Intergenic	Intergenic	26382	NM_139218	73708	Mm.27982	NM_139218	ENSMUSG00000046323	Dppa3	2410075G02Rik|PCG7|PGC7|Stella	developmental pluripotency-associated 3	protein-coding
common_peak2-25234-13-12-0.0780323124966764-0.334470287753051	chr18	64078232	64078751	+	0	NA	intron (NM_001014981, intron 22 of 27)	Lx7|LINE|L1	210142	NM_001014981	104082	Mm.30850	NM_001014981	ENSMUSG00000040560	Wdr7	AI462727|TRAG|mKIAA0541	WD repeat domain 7	protein-coding
common_peak2-19702-12-12--0.0516637330534535-0.309718203022949	chr1	63730542	63731042	+	0	NA	intron (NM_001081658, intron 2 of 14)	intron (NM_001081658, intron 2 of 14)	2709	NM_001081658	241073	Mm.297680	NM_001081658	ENSMUSG00000069085	Dytn	Gm215	dystrotelin	protein-coding
common_peak1-9380-17-31--0.781703661794962-0.932560489028298	chr11	98682560	98683223	+	0	NA	exon (NM_138660, exon 4 of 14)	exon (NM_138660, exon 4 of 14)	-11488	NR_033551	100037262	Mm.442062	NR_033551	ENSMUSG00000075576	Gm12359	OTTMUSG00000006457	predicted gene 12359	ncRNA
common_peak2-25443-8-8--0.164702583494742-1.00793137938329	chr19	4071990	4072592	+	0	NA	Intergenic	ID_B1|SINE|B4	-10197	NM_001160253	29866	Mm.46268	NM_013878	ENSMUSG00000024857	Cabp2	-	calcium binding protein 2	protein-coding
common_peak1-16594-14-13-0.0918612383000403-0.332077462497413	chr5	149031097	149031679	+	0	NA	intron (NM_029920, intron 5 of 14)	intron (NM_029920, intron 5 of 14)	180092	NM_007513	11987	Mm.275489	NM_007513	ENSMUSG00000041313	Slc7a1	4831426K01Rik|AI447493|Atrc-1|Atrc1|Cat1|Rec-1|Rev-1|mCAT-1	solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	protein-coding
unique_peak1-5409-11-3-1.50869358425161-1.95434855131066	chr5	107838007	107838530	+	0	NA	intron (NM_001001804, intron 2 of 6)	RMER12|LTR|ERVK	5736	NM_001001804	384214	Mm.489863	NM_001001804	ENSMUSG00000033805	Ephx4	Abhd7|Ephxrp|Gm1382	epoxide hydrolase 4	protein-coding
common_peak1-12008-15-19--0.309763344331706-0.356936432242222	chr17	14943153	14943807	+	0	NA	Intergenic	L1Md_T|LINE|L1	-112211	NM_011581	21826	Mm.26688	NM_011581	ENSMUSG00000023885	Thbs2	TSP2|Thbs-2	thrombospondin 2	protein-coding
unique_peak2-39329-4-6--0.830815435910851-0.989110657569874	chr8	126767792	126768168	+	0	NA	intron (NM_139272, intron 1 of 15)	intron (NM_139272, intron 1 of 15)	12686	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
unique_peak1-3666-10-1-2.35641534500877-2.57096726280955	chr19	40476705	40477253	+	0	NA	promoter-TSS (NM_001034964)	promoter-TSS (NM_001034964)	-179	NM_001034964	20411	Mm.210815	NM_009166		Sorbs1	2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296	sorbin and SH3 domain containing 1	protein-coding
common_peak1-17548-8-4-0.683294323060208-1.21878474469819	chr7	29511171	29511689	+	0	NA	intron (NM_015796, intron 2 of 6)	RSINE1|SINE|B4	9621	NM_015796	50760	Mm.358659	NM_015796	ENSMUSG00000030598	Fbxo17	Fbg4|Fbx17|Fbxo26	F-box protein 17	protein-coding
common_peak2-19826-18-14-0.406028555619833-0.532159081577619	chr1	89117772	89118409	+	0	NA	intron (NM_001039169, intron 3 of 6)	intron (NM_001039169, intron 3 of 6)	7576	NM_001039169	26987	Mm.227183	NM_023314	ENSMUSG00000026254	Eif4e2	2700069E09Rik|AI036339|AV129531|D0H0S6743E|Eif4el3	eukaryotic translation initiation factor 4E member 2	protein-coding
common_peak1-15912-337-487-0.420019483344069-5.56860601317349	chr5	23432660	23436165	+	0	NA	Intergenic	Intergenic	76361	NR_028536	100217436		NR_028536		Snord93	Gm22397|MBII-336	small nucleolar RNA, C/D box 93	snoRNA
common_peak2-20137-19-26--0.352200175501782-0.416752705545949	chr1	166137028	166137877	+	0	NA	intron (NM_007976, intron 18 of 24)	intron (NM_007976, intron 18 of 24)	-41725	NM_054087	116914	Mm.35444	NM_054087	ENSMUSG00000040918	Slc19a2	AV276020|AW322295|DDA1|THTR1|TRMA	solute carrier family 19 (thiamine transporter), member 2	protein-coding
unique_peak2-39200-10-9-0.0344872501214071-1.05503135781948	chr8	105269420	105269949	+	0	NA	intron (NM_009866, intron 1 of 12)	L1Md_F2|LINE|L1	39327	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
common_peak2-22794-44-38-0.536490615706287-1.13178052607246	chr14	7953213	7954874	+	0	NA	intron (NM_001270812, intron 2 of 5).3	B1_Mus2|SINE|Alu	-16072	NM_001024712	100042149	Mm.396155	NM_001024712	ENSMUSG00000092167	Gm3696	544988|ENSMUSG00000056940|Gm10014	predicted gene 3696	protein-coding
common_peak2-28065-53-32-1.09657889305748-3.58902746971263	chr4	63402566	63403631	+	0	NA	intron (NM_177371, intron 1 of 3)	intron (NM_177371, intron 1 of 3)	3049	NM_177371	326623	Mm.208152	NM_177371		Tnfsf15	Tl1|Tl1a|Vegi	tumor necrosis factor (ligand) superfamily, member 15	protein-coding
unique_peak2-37125-4-5--0.608423014574403-0.909929411522249	chr4	11127560	11127917	+	0	NA	intron (NM_178112, intron 27 of 27)	intron (NM_178112, intron 27 of 27)	8882	NM_001282943	12448	Mm.35867	NM_009830	ENSMUSG00000028212	Ccne2	-	cyclin E2	protein-coding
unique_peak1-2518-19-3-2.40268732666169-3.59864904409227	chr16	20315182	20315871	+	0	NA	intron (NM_183158, intron 2 of 8)	intron (NM_183158, intron 2 of 8)	9951	NM_183158	224044	Mm.276400	NM_183158	ENSMUSG00000022818	Cyp2ab1	EG224044|F730023N20	cytochrome P450, family 2, subfamily ab, polypeptide 1	protein-coding
common_peak2-32273-11-6-0.701338662194009-1.32595962126035	chrX	13242537	13242949	+	0	NA	exon (NM_175669, exon 4 of 4)	exon (NM_175669, exon 4 of 4)	4254	NM_175669	319200	Mm.383294	NM_175669	ENSMUSG00000047678	Gpr82	-	G protein-coupled receptor 82	protein-coding
common_peak2-21454-21-17-0.399564263823923-0.561823156887258	chr11	86860405	86861084	+	0	NA	intron (NM_025638, intron 4 of 9)	intron (NM_025638, intron 4 of 9)	26895	NM_025638	66569	Mm.281887	NM_025638	ENSMUSG00000061666	Gdpd1	2610020H15Rik	glycerophosphodiester phosphodiesterase domain containing 1	protein-coding
unique_peak1-3263-10-4-1.03448725012141-1.5150158574804	chr18	67324606	67325155	+	0	NA	intron (NM_010307, intron 4 of 11)	intron (NM_010307, intron 4 of 11)	31666	NM_010307	14680	Mm.440746	NM_010307	ENSMUSG00000024524	Gnal	2610011C15Rik|9630020G10Rik|Galphaolf|Gna10|Golf	guanine nucleotide binding protein, alpha stimulating, olfactory type	protein-coding
common_peak1-11067-17-10-0.75886471956774-0.917676348953458	chr15	57976460	57977199	+	0	NA	intron (NM_029734, intron 1 of 5)	MTEa|LTR|MaLR	3838	NM_029734	76773	Mm.26771	NM_029734	ENSMUSG00000022359	Wdyhv1	2410187C16Rik|AU014961|AW550036|Ntaq1	WDYHV motif containing 1	protein-coding
unique_peak1-2322-8-9--0.316705676939792-1.03275496310833	chr15	83174736	83175206	+	0	NA	intron (NM_025445, intron 1 of 15)	intron (NM_025445, intron 1 of 15)	5706	NM_025445	66251	Mm.258910	NM_025445	ENSMUSG00000054277	Arfgap3	0610009H19Rik|1810004P07Rik|1810035F16Rik|9130416J18Rik|Arfgap1	ADP-ribosylation factor GTPase activating protein 3	protein-coding
common_peak1-15005-71-123--0.309752131666904-0.817063276037886	chr3	108910561	108912251	+	0	NA	intron (NM_029054, intron 6 of 9)	L1Md_F3|LINE|L1	-14661	NM_172685	229731	Mm.33574	NM_172685	ENSMUSG00000040322	Slc25a24	2610016M12Rik	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24	protein-coding
common_peak2-21968-28-40--0.304592884796621-0.447010559430123	chr12	44209326	44210333	+	0	NA	Intergenic	Intergenic	1101226	NM_013760	27362	Mm.27432	NM_013760	ENSMUSG00000014905	Dnajb9	AA408011|AA673251|AA673481|AW556981|ERdj4|Mdg1|mDj7	DnaJ (Hsp40) homolog, subfamily B, member 9	protein-coding
unique_peak2-36165-7-7--0.200909169701811-0.97990265578305	chr2	27414639	27415210	+	0	NA	Intergenic	Intergenic	44257	NM_080848	140858	Mm.28265	NM_080848	ENSMUSG00000026917	Wdr5	2410008O07Rik|AA408785|AA960360|Big|Big-3	WD repeat domain 5	protein-coding
unique_peak1-4310-9-1-2.18961340640422-2.31132995230379	chr2	148836934	148837454	+	0	NA	Intergenic	Intergenic	-135990	NM_009976	13010	Mm.4263	NM_009976	ENSMUSG00000027447	Cst3	CysC	cystatin C	protein-coding
common_peak2-22903-11-17--0.661231417190699-0.58239619684445	chr14	34310693	34311503	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-50754	NM_016700	26419	Mm.21495	NM_016700	ENSMUSG00000021936	Mapk8	AI849689|JNK|JNK1|Prkm8|SAPK1	mitogen-activated protein kinase 8	protein-coding
unique_peak2-34284-6-16--1.52206473087004-1.32521814697968	chr13	73467263	73467954	+	0	NA	promoter-TSS (NM_053163)	promoter-TSS (NM_053163)	-849	NM_053163	94066	Mm.26775	NM_053163	ENSMUSG00000021607	Mrpl36	AI646041	mitochondrial ribosomal protein L36	protein-coding
unique_peak1-1659-7-1-1.79909083029819-1.80617997398389	chr13	63151927	63152418	+	0	NA	intron (NM_001289926, intron 3 of 15)	Lx|LINE|L1	85919	NM_001289924	72061	Mm.188105	NM_028079	ENSMUSG00000021458	2010111I01Rik	2300006M17Rik|AP-O|Aopep	RIKEN cDNA 2010111I01 gene	protein-coding
unique_peak2-39775-2-12--2.61789397440441-2.55640854263862	chrX	7739513	7740165	+	0	NA	intron (NM_172478, intron 3 of 5)	B1_Mus2|SINE|Alu	13468	NM_001166437	209815	Mm.122963	NM_172478	ENSMUSG00000039201	Tbc1d25	6330576A08Rik|A530047E07|DXHXS7927e|Oatl1|mMg81	TBC1 domain family, member 25	protein-coding
common_peak2-27826-28-49--0.590897069953262-0.983321682013132	chr3	146447952	146448828	+	0	NA	intron (NM_011100, intron 1 of 9)	ORR1A2|LTR|MaLR	-4010	NM_001164200	18749	Mm.16766	NM_011100	ENSMUSG00000005034	Prkacb	Pkacb	protein kinase, cAMP dependent, catalytic, beta	protein-coding
common_peak2-21692-18-32--0.731474968130102-0.907815120698057	chr11	106084527	106085416	+	0	NA	intron (NM_028074, intron 1 of 17)	intron (NM_028074, intron 1 of 17)	6731	NM_028074	72047	Mm.41367	NM_028074	ENSMUSG00000020705	Ddx42	1810047H21Rik|AW319508|AW556242|B430002H05Rik|RHELP|RNAHP|SF3b125	DEAD (Asp-Glu-Ala-Asp) box polypeptide 42	protein-coding
common_peak1-19420-44-69--0.307390182376431-0.549574798715332	chrX	74269472	74270966	+	0	NA	Intergenic	MTA_Mm-int|LTR|MaLR	-421956	NM_001201395	74987	Mm.107996	NM_001201395	ENSMUSG00000079525	4930468A15Rik	-	RIKEN cDNA 4930468A15 gene	protein-coding
unique_peak2-38436-4-8--1.19338551529556-1.21878474469819	chr7	27258840	27259345	+	0	NA	intron (NM_172896, intron 10 of 10)	B4A|SINE|B4	38960	NM_172896	243880	Mm.322356	NM_172896	ENSMUSG00000040601	Nlrp4a	E330021B02|E330028A19Rik|NALP4|Nalp-eta|Nalp-ita|Nalp4a	NLR family, pyrin domain containing 4A	protein-coding
common_peak2-32043-16-22--0.405298313788951-0.440610794044987	chr9	79759315	79759957	+	0	NA	intron (NM_001081243, intron 1 of 5)	intron (NM_001081243, intron 1 of 5)	66053	NM_001081243	70598	Mm.23049	NM_001081243	ENSMUSG00000034898	Filip1	5730485H21Rik|AI843021	filamin A interacting protein 1	protein-coding
common_peak2-27802-17-16-0.130833496954699-0.356936432242225	chr3	142620400	142620899	+	0	NA	Intergenic	Intergenic	-75681	NM_178654	109333	Mm.244236	NM_178654	ENSMUSG00000004591	Pkn2	6030436C20Rik|AI507382|PRK2|Prkcl2|Stk7	protein kinase N2	protein-coding
common_peak2-29657-33-37-0.0834100490819436-0.326417267106726	chr6	71440760	71441726	+	0	NA	Intergenic	Intergenic	-2645	NM_009543	22644	Mm.422969	NM_009543	ENSMUSG00000052656	Rnf103	AW146237|AW212918|Zfp103|kf-1	ring finger protein 103	protein-coding
common_peak1-8554-14-9-0.577288065470282-0.630231561310125	chr10	93589121	93589724	+	0	NA	intron (NM_053072, intron 13 of 20)	intron (NM_053072, intron 13 of 20)	-21254	NM_011629	22025	Mm.107483	NM_011629	ENSMUSG00000005897	Nr2c1	4831444H07Rik|80.3|Eenr|TR2|Tr2-11	nuclear receptor subfamily 2, group C, member 1	protein-coding
common_peak2-22905-84-132--0.120348376612164-0.386543134342364	chr14	34501783	34503476	+	0	NA	Intergenic	Intergenic	100173	NM_008978	19256	Mm.8019	NM_008978	ENSMUSG00000021940	Ptpn20	typ	protein tyrosine phosphatase, non-receptor type 20	protein-coding
unique_peak1-669-10-3-1.35641534500877-1.75805390616669	chr10	62175557	62176082	+	0	NA	intron (NM_001033260, intron 1 of 3)	intron (NM_001033260, intron 1 of 3)	13028	NM_001033260	216021	Mm.39821	NM_001033260	ENSMUSG00000036923	Stox1	4732470K04Rik|Gm63	storkhead box 1	protein-coding
common_peak1-10790-21-31--0.430510734733764-0.49501414494053	chr14	76413815	76414611	+	0	NA	Intergenic	Intergenic	-3541	NM_026816	68705	Mm.20415	NM_026816	ENSMUSG00000067995	Gtf2f2	1110031C13Rik|AI326315	general transcription factor IIF, polypeptide 2	protein-coding
common_peak2-28286-71-85-0.218179424017873-0.565418124657885	chr4	129819373	129821338	+	0	NA	Intergenic	Intergenic	-3949	NM_198959	230777	Mm.246595	NM_198959	ENSMUSG00000028778	Hcrtr1	Ox1r	hypocretin (orexin) receptor 1	protein-coding
common_peak2-28864-65-72-0.30234138059711-0.736222529913312	chr5	75043718	75044760	+	0	NA	intron (NM_001159577, intron 2 of 10)	Tigger5|DNA|MER2_type	29658	NM_010727	16924	Mm.440403	NM_010727	ENSMUSG00000029228	Lnx1	Lnx	ligand of numb-protein X 1	protein-coding
common_peak2-28482-16-17--0.0516613591742505-0.301029995663984	chr4	155563909	155564528	+	0	NA	intron (NM_021604, intron 2 of 35)	intron (NM_021604, intron 2 of 35)	7379	NM_021604	11603	Mm.273098	NM_021604	ENSMUSG00000041936	Agrn	Agrin|nmf380	agrin	protein-coding
common_peak2-25681-14-11-0.314253659636488-0.435191258261915	chr19	11965751	11966353	+	0	NA	Intergenic	Intergenic	-4461	NM_146410	258405	Mm.358933	NM_146410	ENSMUSG00000060878	Olfr1420	MOR266-4	olfactory receptor 1420	protein-coding
common_peak2-20551-6-8--0.60452689106201-1.03789460276074	chr10	69350582	69351077	+	0	NA	intron (NM_170728, intron 16 of 40)	intron (NM_170728, intron 16 of 40)	-37451	NM_170687	11735	Mm.235960	NM_009670	ENSMUSG00000069601	Ank3	2900054D09Rik|AI314020|Ank-3|AnkG|Ankyrin-3|Ankyrin-G	ankyrin 3, epithelial	protein-coding
common_peak1-11787-23-31--0.278232495490919-0.396392531282608	chr16	49854781	49855632	+	0	NA	promoter-TSS (NM_010581)	promoter-TSS (NM_010581)	-561	NM_010581	16423	Mm.31752	NM_010581	ENSMUSG00000055447	Cd47	9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp	CD47 antigen (Rh-related antigen, integrin-associated signal transducer)	protein-coding
common_peak2-25802-24-22-0.269647946710704-0.457753417732779	chr19	37550324	37550960	+	0	NA	Intergenic	MTA_Mm-int|LTR|MaLR	41311	NM_008245	15242	Mm.33896	NM_008245		Hhex	Hex|Hex1|Hhex-rs2|Prh|Prhx	hematopoietically expressed homeobox	protein-coding
common_peak1-9597-18-11-0.727956650507195-0.876666802405043	chr11	119976216	119976846	+	0	NA	intron (NM_024249, intron 11 of 16)	intron (NM_024249, intron 11 of 16)	16283	NM_001110242	208501	Mm.46699	NM_001110242		1810043H04Rik	-	RIKEN cDNA 1810043H04 gene	protein-coding
unique_peak1-492-10-1-2.35641534500877-2.57096726280955	chr1	179569292	179569805	+	0	NA	Intergenic	Intergenic	3526	NR_037994	75589	Mm.86666	NR_037994		2310043L19Rik	-	RIKEN cDNA 2310043L19 gene	ncRNA
unique_peak2-38254-1-5--2.2120195109379-1.32905871926422	chr6	125131922	125132339	+	0	NA	intron (NM_146171, intron 9 of 31)	B1_Mur1|SINE|Alu	4319	NR_028517	100217413		NR_028517		Scarna10	MBI-52	small Cajal body-specific RNA 10	ncRNA
common_peak1-15802-34-44--0.109784569328409-0.311130777923626	chr5	122158258	122159181	+	0	NA	Intergenic	RSINE1|SINE|B4	-2899	NM_009125	20239	Mm.260900	NM_009125	ENSMUSG00000042605	Atxn2	9630045M23Rik|ATX2|AW544490|Sca2	ataxin 2	protein-coding
unique_peak2-38585-5-13--1.51173525806346-1.78669045979184	chr7	67952909	67953489	+	0	NA	Intergenic	Intergenic	-668094	NM_001082962	20646	Mm.274995	NM_013670	ENSMUSG00000000948	Snrpn	2410045I01Rik|HCERN3|Peg4|Pwcr1|SMN	small nuclear ribonucleoprotein N	protein-coding
unique_peak2-36274-3-4--0.73591118484664-0.864171920961574	chr2	60694971	60695309	+	0	NA	intron (NM_020296, intron 1 of 13)	intron (NM_020296, intron 1 of 13)	24355	NM_001141932	56878	Mm.259667	NM_020296	ENSMUSG00000026970	Rbms1	2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1	RNA binding motif, single stranded interacting protein 1	protein-coding
unique_peak1-1399-9-2-1.60465090568306-1.87199725847353	chr12	70712240	70712733	+	0	NA	intron (NM_001135559, intron 12 of 22)	(CAT)n|Simple_repeat|Simple_repeat	-28471	NM_001033236	207965	Mm.102487	NM_001033236	ENSMUSG00000049882	Vcpkmt	Gm71|Mettl21d|Mettl221d|VCP-KMT	valosin containing protein lysine (K) methyltransferase	protein-coding
common_peak1-14996-11-10-0.0492619656143161-0.31137425193576	chr3	108443817	108444355	+	0	NA	intron (NM_181400, intron 13 of 14)	B4A|SINE|B4	-12745	NM_145543	229725	Mm.214545	NM_145543	ENSMUSG00000027884	Clcc1	Mclc	chloride channel CLIC-like 1	protein-coding
unique_peak2-34123-4-24--2.66731670362797-3.74275476306371	chr13	21786837	21787300	+	0	NA	Intergenic	MTD|LTR|MaLR	-7804	NM_001011820	258067	Mm.453831	NM_001011820	ENSMUSG00000096404	Olfr1359	MOR256-35|MOR256-60	olfactory receptor 1359	protein-coding
unique_peak2-34104-5-6--0.511735258063458-0.947717972411649	chr13	15463049	15463484	+	0	NA	Intergenic	Intergenic	-92290	NM_008130	14634	Mm.5098	NM_008130	ENSMUSG00000021318	Gli3	AI854843|AU023367|Bph|GLI3-190|GLI3FL|Pdn|Xt|add	GLI-Kruppel family member GLI3	protein-coding
common_peak2-26601-13-11-0.193509529916613-0.379391706698377	chr2	112492068	112492442	+	0	NA	intron (NM_177652, intron 89 of 103)	intron (NM_177652, intron 89 of 103)	92416	NM_001165935	74268	Mm.315125	NM_028844		Aven	1700013A01Rik|1700056A21Rik|mAven-L|mAven-S	apoptosis, caspase activation inhibitor	protein-coding
unique_peak2-38870-12-15--0.351224014912361-0.332077462497413	chr8	106561236	106562200	+	0	NA	Intergenic	Intergenic	-63807	NM_009868	12562	Mm.21767	NM_009868	ENSMUSG00000031871	Cdh5	7B4|AA408225|Cd144|VE-Cad|VECD|VEcad|Vec	cadherin 5	protein-coding
common_peak2-32320-21-37--0.67843824817735-0.907273387067392	chrX	71816206	71817244	+	0	NA	Intergenic	Intergenic	-22942	NM_146398	258393	Mm.377477	NM_146398	ENSMUSG00000051706	Olfr1325	MOR102-1	olfactory receptor 1325	protein-coding
common_peak2-24503-16-6-1.31090872021046-1.49151883326344	chr17	26095204	26095543	+	0	NA	Intergenic	Intergenic	7077	NM_015830	50817	Mm.216072	NM_015830	ENSMUSG00000037326	Capn15	Solh	calpain 15	protein-coding
common_peak2-21379-16-25--0.58217607587303-0.633951497070961	chr11	78750956	78751777	+	0	NA	exon (NM_010927, exon 9 of 27)	exon (NM_010927, exon 9 of 27)	17005	NM_010927	18126	Mm.2893	NM_010927	ENSMUSG00000020826	Nos2	NOS-II|Nos-2|Nos2a|i-NOS|iNOS	nitric oxide synthase 2, inducible	protein-coding
unique_peak2-39433-11-22--1.0148683718054-1.11267835143409	chr9	44733847	44734726	+	0	NA	intron (NM_145400, intron 19 of 19)	intron (NM_145400, intron 19 of 19)	-5461	NM_013795	27425	Mm.14663	NM_013795	ENSMUSG00000038717	Atp5l	4933437C06Rik	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit G	protein-coding
common_peak1-10212-38-68--0.537071797479639-1.05356820041554	chr13	48967878	48968886	+	0	NA	Intergenic	Intergenic	-2128	NM_011078	18676	Mm.486213	NM_011078	ENSMUSG00000038025	Phf2	GRC5	PHD finger protein 2	protein-coding
common_peak2-30468-27-38--0.293856267967013-0.412842868820461	chr7	46919444	46920442	+	0	NA	Intergenic	ORR1E|LTR|MaLR	146807	NM_001004139	70227	Mm.333800	NM_001004139	ENSMUSG00000068959	Zfp619	3000002G13Rik	zinc finger protein 619	protein-coding
unique_peak1-5421-7-4-0.477162735410827-1.09384600808989	chr5	113199289	113199788	+	0	NA	intron (NM_028901, intron 34 of 43)	(CTGGGG)n|Simple_repeat|Simple_repeat	-22774	NR_040675	67360	Mm.59218	NR_040675	ENSMUSG00000098230	1700095B10Rik	-	RIKEN cDNA 1700095B10 gene	ncRNA
common_peak1-16900-11-14--0.398197011356905-0.379391706698377	chr6	72344566	72345092	+	0	NA	Intergenic	PB1D10|SINE|Alu	-4168	NM_016794	22320	Mm.1838	NM_016794	ENSMUSG00000050732	Vamp8	AU041171|Edb|endobrevin	vesicle-associated membrane protein 8	protein-coding
unique_peak1-4328-18-7-1.31291915122835-1.71830443967823	chr2	152343462	152344225	+	0	NA	promoter-TSS (NM_001037502)	promoter-TSS (NM_001037502)	-148	NM_001037502	545475	Mm.389378	NM_001037502	ENSMUSG00000074679	Defb28	Gm1635|OTTMUSG00000015852	defensin beta 28	protein-coding
common_peak1-14970-22-37--0.600643408356181-0.808568985218824	chr3	105894530	105895549	+	0	NA	Intergenic	L1Md_A|LINE|L1	-21261	NM_023186	81600	Mm.46418	NM_023186	ENSMUSG00000062778	Chia1	2200003E03Rik|AMCase|Chia|YNL	chitinase, acidic 1	protein-coding
common_peak2-30763-100-137-0.128247318032621-0.448869013928416	chr7	122969814	122970908	+	0	NA	intron (NM_001025559, intron 2 of 15)	intron (NM_001025559, intron 2 of 15)	-2137	NM_001277327	20679	Mm.323365	NM_011445	ENSMUSG00000051910	Sox6	AI987981|SOX-LZ	SRY (sex determining region Y)-box 6	protein-coding
unique_peak2-39243-12-14--0.25811461052088-0.309074325783021	chr8	112011476	112012188	+	0	NA	Intergenic	Lx6|LINE|L1	-6095	NM_019938	56523	Mm.42166	NM_019938	ENSMUSG00000031727	Pmfbp1	1700016D22Rik|F77|Stap	polyamine modulated factor 1 binding protein 1	protein-coding
common_peak1-12599-14-6-1.09186123830004-1.16633110333236	chr18	24717714	24718256	+	0	NA	Intergenic	Intergenic	-29280	NM_144861	225283	Mm.28427	NM_144861	ENSMUSG00000040446	Rprd1a	C77387|mKIAA4077	regulation of nuclear pre-mRNA domain containing 1A	protein-coding
common_peak1-18540-34-43--0.0773630916360313-0.30358472802154	chr8	94784404	94785515	+	0	NA	Intergenic	(TCCCC)n|Simple_repeat|Simple_repeat	95060	NR_110452	71296	Mm.86664	NR_033641	ENSMUSG00000031736	Crnde	4933436C20Rik	colorectal neoplasia differentially expressed (non-protein coding)	ncRNA
unique_peak1-4780-8-6-0.197867495889966-1.03789460276074	chr3	127943739	127944254	+	0	NA	Intergenic	Intergenic	-9473	NR_045704	402774	Mm.209170	NR_045704		D030025E07Rik	-	RIKEN cDNA D030025E07 gene	ncRNA
common_peak1-9633-24-29--0.113680692840802-0.304839791830752	chr12	25100019	25101315	+	0	NA	Intergenic	Intergenic	-82779	NM_020614	21340	Mm.39082	NM_020614	ENSMUSG00000059669	Taf1b	4930408G01Rik|A230108M10Rik|TAFI68|Tafi86	TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B	protein-coding
common_peak1-14716-31-54--0.556121042711537-0.994719720785867	chr3	79286380	79287412	+	0	NA	intron (NM_001162999, intron 12 of 16)	intron (NM_001162999, intron 12 of 16)	84705	NM_001162999	329679	Mm.244005	NM_001162999	ENSMUSG00000061175	Fnip2	D630023B12Rik|mKIAA1450	folliculin interacting protein 2	protein-coding
common_peak2-28527-24-31--0.206790097232283-0.334168439396943	chr5	125140758	125141436	+	0	NA	intron (NM_011596, intron 9 of 19)	intron (NM_011596, intron 9 of 19)	61464	NM_011596	21871	Mm.1158	NM_011596		Atp6v0a2	8430408C20Rik|AI385560|ATP6a2|AW489264|Atp6n1d|Atp6n2|C76904|ISF|J6B7|SHIF|Stv1|TJ6M|TJ6s|Tj6|V-ATPase 116 kDa|V-ATPase a2	ATPase, H+ transporting, lysosomal V0 subunit A2	protein-coding
common_peak2-25004-10-5-0.771452844287613-1.33892459842472	chr18	12741385	12741579	+	0	NA	TTS (NM_010680)	TTS (NM_010680)	-60560	NM_028341	72747	Mm.52526	NM_028341	ENSMUSG00000024424	Ttc39c	1700008N02Rik|2810439F02Rik	tetratricopeptide repeat domain 39C	protein-coding
unique_peak2-33678-1-9--2.94898510510411-2.31132995230379	chr11	102408091	102408517	+	0	NA	intron (NM_001159492, intron 1 of 7)	intron (NM_001159492, intron 1 of 7)	9168	NM_001159492	237943	Mm.260282	NM_001159492	ENSMUSG00000034621	Gpatch8	5430405G24Rik|AU018890|ENSMUSG00000075516|Fbm1|Gpatc8|mKIAA0553	G patch domain containing 8	protein-coding
common_peak2-29220-47-88--0.54089200619985-1.36934044104	chr5	137612589	137614056	+	0	NA	Intergenic	ID_B1|SINE|B4	-21245	NM_201373	384309	Mm.100647	NM_201373		Trim56	A130009K11Rik|Gm452|RNF109	tripartite motif-containing 56	protein-coding
common_peak1-13897-51-114--0.770566225341802-2.98180199283534	chr2	77279802	77281088	+	0	NA	intron (NM_178723, intron 6 of 9)	intron (NM_178723, intron 6 of 9)	-20256	NR_040368	100503106	Mm.443215	NR_040368	ENSMUSG00000085845	Gm13944	OTTMUSG00000015155	predicted gene 13944	ncRNA
common_peak2-27982-18-25--0.38752056691274-0.421916810733234	chr4	43561677	43562620	+	0	NA	intron (NM_011602, intron 16 of 56)	intron (NM_011602, intron 16 of 56)	13307	NM_011602	21894	Mm.208601	NM_011602	ENSMUSG00000028465	Tln1	Tln	talin 1	protein-coding
common_peak1-18630-14-10-0.439784541720347-0.519648556297791	chr8	110618716	110619486	+	0	NA	Intergenic	Intergenic	489476	NR_077224	109215	Mm.65282	NR_077224		3010033K07Rik	-	RIKEN cDNA 3010033K07 gene	ncRNA
common_peak1-17549-26-50--0.744526249813033-1.39836854781781	chr7	29953545	29954254	+	0	NA	promoter-TSS (NM_182927)	promoter-TSS (NM_182927)	-233	NM_182927	101809	Mm.377262	NM_182927	ENSMUSG00000037239	Spred3	AW047143|D130060H24Rik|Spred-3	sprouty-related, EVH1 domain containing 3	protein-coding
common_peak1-7821-40-25-0.958535964610006-2.27205585058211	chr1	125693163	125694758	+	0	NA	intron (NM_199021, intron 3 of 25)	intron (NM_199021, intron 3 of 25)	248176	NM_199021	269109	Mm.483255	NM_199021	ENSMUSG00000036815	Dpp10	6430601K09Rik|DPP X|Dprp3	dipeptidylpeptidase 10	protein-coding
unique_peak2-35942-5-7--0.704380336005853-1.01466476204226	chr19	9077173	9077546	+	0	NA	exon (NM_009643, exon 5 of 5)	exon (NM_009643, exon 5 of 5)	13585	NM_001286518	66395	Mm.203866	NM_009643	ENSMUSG00000069833	Ahnak	DY6	AHNAK nucleoprotein (desmoyokin)	protein-coding
common_peak1-10941-22-31--0.352715894912595-0.440892966163086	chr15	12307153	12307957	+	0	NA	intron (NM_001081064, intron 18 of 23)	intron (NM_001081064, intron 18 of 23)	56304	NM_025673	66629	Mm.157655	NM_025673	ENSMUSG00000022200	Golph3	4733401N08Rik|5730410D03Rik|AW413496	golgi phosphoprotein 3	protein-coding
common_peak1-13871-33-39-0.00940946763816619-0.303778768325576	chr2	71211712	71212701	+	0	NA	Intergenic	Intergenic	-6595	NM_172436	78830	Mm.30928	NM_172436		Slc25a12	2610002D09Rik|AI839531|B230107K20Rik|BB129864	solute carrier family 25 (mitochondrial carrier, Aralar), member 12	protein-coding
common_peak2-20379-29-67--0.975172760635228-2.5182653668895	chr10	17947065	17948350	+	0	NA	intron (NM_144820, intron 2 of 5)	intron (NM_144820, intron 2 of 5)	7080	NM_144820	215814	Mm.296565	NM_144820	ENSMUSG00000059554	Ccdc28a	1700009P13Rik|AI480677	coiled-coil domain containing 28A	protein-coding
unique_peak1-6170-13-3-1.77847203063777-2.58603100924543	chr6	145337427	145338241	+	0	NA	non-coding (NR_003625, exon 1 of 1)	non-coding (NR_003625, exon 1 of 1)	1689	NR_003625	381827	Mm.179075	NM_001001987		1700073E17Rik	-	ribosomal protein L7 pseudogene	pseudo
unique_peak2-33777-10-13--0.450939577048835-0.386243247519795	chr11	119052781	119053448	+	0	NA	intron (NM_172443, intron 3 of 11)	intron (NM_172443, intron 3 of 11)	36699	NM_172443	207592	Mm.205263	NM_172443	ENSMUSG00000039976	Tbc1d16	B930087K01|BC026530|Tcd1d16	TBC1 domain family, member 16	protein-coding
unique_peak2-35379-3-19--2.73591118484664-3.11807310444576	chr17	29094674	29095208	+	0	NA	exon (NM_025888, exon 2 of 8)	exon (NM_025888, exon 2 of 8)	4780	NM_025888	66989	Mm.435	NM_025888	ENSMUSG00000005936	Kctd20	2410004N11Rik|AI451943|AW541186|D17Ertd562e	potassium channel tetramerisation domain containing 20	protein-coding
common_peak2-21939-16-22--0.405298313788951-0.440610794044987	chr12	28749814	28750485	+	0	NA	Intergenic	Intergenic	483053	NM_001177964	68511	Mm.310284	NM_001177964		Dcdc2c	1110015M06Rik	doublecortin domain containing 2C	protein-coding
common_peak2-22411-17-26--0.53659116395843-0.538442145997695	chr13	34875406	34876020	+	0	NA	Intergenic	Intergenic	44202	NM_138746	108161	Mm.41991	NM_138746	ENSMUSG00000038246	Fam50b	D0H6S2654E|X5L|XAP-5-like	family with sequence similarity 50, member B	protein-coding
common_peak1-19006-15-8-0.842239749113344-0.891319708951327	chr9	60840928	60841891	+	0	NA	Intergenic	Intergenic	-23467	NR_040767	330956	Mm.207985	NR_040767		Gm5122	A430102L10	predicted gene 5122	ncRNA
unique_peak2-37336-8-25--1.69521730019352-2.29727994934156	chr4	130519392	130520260	+	0	NA	Intergenic	Intergenic	19526	NM_010769	17180	Mm.271796	NM_010769	ENSMUSG00000040533	Matn1	CMP|Crtm|Mat1|matrilin-1	matrilin 1, cartilage matrix protein	protein-coding
unique_peak2-32751-7-6--0.00826409175941478-0.97990265578305	chr1	168426218	168426654	+	0	NA	intron (NM_001164306, intron 1 of 7)	intron (NM_001164306, intron 1 of 7)	1283	NM_001164306	226601	Mm.475593	NM_001164306	ENSMUSG00000086056	Gm4846	EG226601|Fmo13	predicted gene 4846	protein-coding
common_peak1-8531-45-47-0.275395524623716-0.551726087667598	chr10	88730423	88731987	+	0	NA	Intergenic	B3|SINE|B2	-10670	NR_102339	320091	Mm.236464	NM_178773	ENSMUSG00000035189	Ano4	A330096O15Rik|Gm65|Tmem16d	anoctamin 4	protein-coding
common_peak1-8297-13-19--0.543456064249594-0.466170754204149	chr10	34207001	34207787	+	0	NA	intron (NM_010237, intron 2 of 8)	L1Md_F3|LINE|L1	4188	NM_010237	14302	Mm.332432	NM_010237	ENSMUSG00000019779	Frk	BSK|BSK/IYK|C85044|GTK|RAK	fyn-related kinase	protein-coding
common_peak2-26376-2-6--1.72480917832092-1.26211192963361	chr2	45019368	45019653	+	0	NA	Intergenic	Intergenic	-50711	NM_015753	24136	Mm.440702	NM_015753	ENSMUSG00000026872	Zeb2	9130203F04Rik|D130016B08Rik|SIP1|Zfhx1b|Zfx1b|Zfxh1b	zinc finger E-box binding homeobox 2	protein-coding
common_peak2-21274-19-39--0.919240768225676-1.49187957593	chr11	69979683	69981199	+	0	NA	intron (NM_010796, intron 1 of 9)	intron (NM_010796, intron 1 of 9)	316	NM_010796	17312	Mm.252405	NM_010796	ENSMUSG00000000318	Clec10a	CD301a|M-ASGP-BP-1|Mgl|Mgl1	C-type lectin domain family 10, member A	protein-coding
common_peak2-27222-10-15--0.643584654991231-0.519648556297791	chr3	51341301	51341920	+	0	NA	intron (NM_080793, intron 3 of 7)	B3|SINE|B2	-22069	NR_033624	100039684	Mm.387178	NR_033624	ENSMUSG00000097885	5031434O11Rik	AI481280|Gm2370	RIKEN cDNA 5031434O11 gene	ncRNA
common_peak2-25524-16-11-0.533301141546906-0.58239619684445	chr19	5806666	5807218	+	0	NA	Intergenic	Intergenic	-4271	NR_002847	72289	Mm.298256	NR_002847	ENSMUSG00000092341	Malat1	2210401K01Rik|9430072K23Rik|AI647968|Neat2	metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)	ncRNA
common_peak2-21799-48-57-0.112946156107243-0.366201338534449	chr11	118360063	118361411	+	0	NA	intron (NM_001285438, intron 8 of 13)	intron (NM_001285438, intron 8 of 13)	22463	NM_172573	217364	Mm.473963	NM_172573	ENSMUSG00000033857	Engase	C130099A03|D230014K01Rik	endo-beta-N-acetylglucosaminidase	protein-coding
unique_peak2-39985-10-25--1.34402437313232-1.74319850844462	chrX	157491245	157492134	+	0	NA	Intergenic	Intergenic	-59076	NM_001024624	382253	Mm.443717	NM_001024624	ENSMUSG00000031292	Cdkl5	BC038161|Stk9	cyclin-dependent kinase-like 5	protein-coding
unique_peak1-1365-10-5-0.771452844287613-1.33892459842472	chr12	32953455	32953985	+	0	NA	Intergenic	Lx3C|LINE|L1	-60206	NM_001146200	30955	Mm.101369	NM_020272	ENSMUSG00000020573	Pik3cg	5830428L06Rik|PI3Kgamma|p110gamma	phosphoinositide-3-kinase, catalytic, gamma polypeptide	protein-coding
common_peak2-27645-15-9-0.690236655668294-0.732381977911291	chr3	107742992	107743605	+	0	NA	intron (NM_008184, intron 7 of 7)	intron (NM_008184, intron 7 of 7)	3369	NM_008184	14867	Mm.458154	NM_008184	ENSMUSG00000068762	Gstm6	-	glutathione S-transferase, mu 6	protein-coding
unique_peak1-4051-9-5-0.604650905683064-1.21398586181642	chr2	60283811	60284336	+	0	NA	intron (NM_008867, intron 17 of 29)	intron (NM_008867, intron 17 of 29)	34491	NR_046065	100039176	Mm.261790	NR_046065	ENSMUSG00000087283	Gm13580	OTTMUSG00000012842	predicted gene 13580	ncRNA
common_peak1-10361-72-47-1.08362131215116-4.81556219886265	chr13	90922550	90924047	+	0	NA	Intergenic	Intergenic	121662	NM_001145879	435376	Mm.292579	NM_001145879	ENSMUSG00000078958	Atp6ap1l	EG435376	ATPase, H+ transporting, lysosomal accessory protein 1-like	protein-coding
common_peak2-29887-19-11-0.81772482594053-0.991115276827166	chr6	113036415	113037116	+	0	NA	intron (NM_028385, intron 1 of 21)	intron (NM_028385, intron 1 of 21)	9132	NM_028385	72895	Mm.367159	NM_028385	ENSMUSG00000034269	Setd5	2900045N06Rik|C330007C20|C85544|mKIAA1757	SET domain containing 5	protein-coding
common_peak1-10379-23-35--0.448157496933232-0.590428395010947	chr13	94284888	94285960	+	0	NA	Intergenic	Intergenic	-15661	NM_021310	57748	Mm.100273	NM_021310	ENSMUSG00000021690	Jmy	-	junction-mediating and regulatory protein	protein-coding
unique_peak2-38427-3-5--0.998945590680433-0.96108193396963	chr7	25680826	25681053	+	0	NA	Intergenic	RMER19A|LTR|ERVK	-1591	NM_007655	12518	Mm.1355	NM_007655	ENSMUSG00000003379	Cd79a	Ig-alpha|Iga|Igalpha|Ly-54|Ly54|mb-1	CD79A antigen (immunoglobulin-associated alpha)	protein-coding
common_peak2-23500-9-9--0.132314688483142-1.03275496310833	chr15	76212823	76213236	+	0	NA	intron (NM_175457, intron 1 of 43)	intron (NM_175457, intron 1 of 43)	2086	NM_175457	223658	Mm.123240	NM_175457	ENSMUSG00000022558	Mroh1	D330001F17Rik|Heatr7a	maestro heat-like repeat family member 1	protein-coding
unique_peak2-36640-6-17--1.60452689106201-1.49151883326343	chr3	8963734	8964455	+	0	NA	promoter-TSS (NM_001025262)	promoter-TSS (NM_001025262)	-40	NM_001025261	21985	Mm.371590	NM_009412	ENSMUSG00000027506	Tpd52	AI043038|mD52	tumor protein D52	protein-coding
common_peak2-22133-65-96--0.107746902710001-0.343065785969797	chr12	85373916	85375331	+	0	NA	Intergenic	ORR1E|LTR|MaLR	-4706	NM_134247	171282	Mm.482217	NM_134247	ENSMUSG00000052392	Acot4	B430212I04Rik|PTE-Ib|Pte1b|Pte2b	acyl-CoA thioesterase 4	protein-coding
common_peak2-29872-42-45-0.218767371810171-0.478941451571433	chr6	108536003	108537180	+	0	NA	intron (NR_104577, intron 3 of 6)	intron (NR_104577, intron 3 of 6)	36570	NR_040757	75394	Mm.395061	NR_040757	ENSMUSG00000087341	0610040F04Rik	-	RIKEN cDNA 0610040F04 gene	ncRNA
common_peak1-8964-7-6--0.00826409175941478-0.97990265578305	chr11	57719479	57719962	+	0	NA	Intergenic	B3|SINE|B2	-74071	NM_008213	15110	Mm.4746	NM_008213	ENSMUSG00000037335	Hand1	Ehand1|Hxt|Th1|Thing1|bHLHa27|eHAND	heart and neural crest derivatives expressed transcript 1	protein-coding
unique_peak2-34656-7-22--1.72447112575882-2.07034318903805	chr14	120910448	120911103	+	0	NA	Intergenic	Intergenic	33092	NM_029519	76108	Mm.261448	NM_029519	ENSMUSG00000051615	Rap2a	5830461H18Rik	RAS related protein 2a	protein-coding
common_peak2-31351-12-28--1.20920501003993-1.52081014994907	chr8	84638569	84639493	+	0	NA	intron (NM_001297596, intron 24 of 24)	L1_Mus2|LINE|L1	287454	NM_001254747	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak1-14655-113-222--0.352230154223595-1.51212593745101	chr3	57575052	57577288	+	0	NA	intron (NM_001113413, intron 3 of 9)	MTD|LTR|MaLR	36182	NM_001113413	24017	Mm.274360	NM_011883	ENSMUSG00000036503	Rnf13	2010001H16Rik|Rzf	ring finger protein 13	protein-coding
common_peak2-25339-54-62-0.195805838129817-0.463230925696324	chr18	77064773	77066110	+	0	NA	Intergenic	L1MC1|LINE|L1	-29703	NM_001109743	664805	Mm.329543	NM_001109743	ENSMUSG00000091519	Skor2	Corl2|EG664805|Fussel18|Gm7348	SKI family transcriptional corepressor 2	protein-coding
common_peak1-15070-61-137--0.725775127028829-3.20883862849633	chr3	126596296	126598010	+	0	NA	Intergenic	L1Md_F|LINE|L1	49151	NM_001034168	109676	Mm.220242	NM_178655	ENSMUSG00000032826	Ank2	AI835472|AW491075|Ank-2	ankyrin 2, brain	protein-coding
common_peak2-19548-90-106-0.312838039541005-0.964790599438563	chr1	177257340	177259313	+	0	NA	intron (NM_001199003, intron 2 of 17)	intron (NM_001199003, intron 2 of 17)	164350	NM_011880	24012	Mm.7956	NM_011880		Rgs7	-	regulator of G protein signaling 7	protein-coding
common_peak1-9144-25-17-0.691924903902794-0.98872314135509	chr11	75966104	75967098	+	0	NA	intron (NM_026664, intron 4 of 21)	B4A|SINE|B4	26531	NM_026664	68299	Mm.46397	NM_026664	ENSMUSG00000017288	Vps53	2010002A08Rik|2310040I21Rik|3100002B05Rik|Hccs1	vacuolar protein sorting 53 (yeast)	protein-coding
common_peak1-18833-20-14-0.581184188982674-0.690311289528838	chr9	14365159	14366253	+	0	NA	intron (NM_001081395, intron 7 of 12)	intron (NM_001081395, intron 7 of 12)	53738	NM_001081395	75723	Mm.159552	NM_001081395	ENSMUSG00000013076	Amotl1	2310010G08Rik|2310067L22Rik|4932416D09Rik|JEAP|mFLJ00155	angiomotin-like 1	protein-coding
unique_peak1-748-12-3-1.64877598508764-2.36932189928148	chr10	111936596	111937122	+	0	NA	Intergenic	Lx5|LINE|L1	-227123	NR_040579	69355	Mm.84337	NR_040579		1700010J16Rik	-	RIKEN cDNA 1700010J16 gene	ncRNA
unique_peak2-39051-4-10--1.48289213249054-1.5150158574804	chr8	70609532	70610138	+	0	NA	Intergenic	B3A|SINE|B2	-111362	NM_177698	234353	Mm.32525	NM_027626	ENSMUSG00000030465	Psd3	4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D	pleckstrin and Sec7 domain containing 3	protein-coding
common_peak2-23256-10-12--0.344024373132323-0.340565874754526	chr15	25395417	25396034	+	0	NA	Intergenic	Lx7|LINE|L1	51778	NR_027376	432939	Mm.146555	NM_001013791		Gm5468	100040583|EG432939	predicted gene 5468	ncRNA
common_peak1-9742-142-233--0.0250424590127851-0.30525102988381	chr12	49383990	49386416	+	0	NA	Intergenic	Intergenic	-1098667	NM_001160112	15228	Mm.4704	NM_008241	ENSMUSG00000020950	Foxg1	2900064B05Rik|BF-1|Bf1|Hfh9|Hfhbf1	forkhead box G1	protein-coding
common_peak2-30000-19-16-0.315224485411347-0.448200956659575	chr6	124663100	124663730	+	0	NA	intron (NM_007531, intron 3 of 8)	intron (NM_007531, intron 3 of 8)	1108	NM_007531	12034	Mm.36241	NM_007531	ENSMUSG00000004264	Phb2	AU044498|BAP|Bap37|Bcap37|REA	prohibitin 2	protein-coding
common_peak2-25140-57-71-0.0961080386366167-0.353864072814984	chr18	42511479	42512419	+	0	NA	Intergenic	Intergenic	-42302	NM_138945	18998	Mm.488204	NM_138945		Pou4f3	Brn3.1|Brn3c|ddl|dreidel	POU domain, class 4, transcription factor 3	protein-coding
common_peak1-15909-47-43-0.47540980612925-0.980945783223891	chr5	21786413	21787576	+	0	NA	intron (NM_011261, intron 2 of 63)	intron (NM_011261, intron 2 of 63)	63529	NM_011261	19699	Mm.425236	NM_011261	ENSMUSG00000042453	Reln	reeler|rl	reelin	protein-coding
unique_peak2-35305-3-8--1.58390809140159-1.39487600375387	chr17	13007960	13008330	+	0	NA	non-coding (NR_027784, exon 3 of 3)	non-coding (NR_027784, exon 3 of 3)	-45573	NM_010515	16004	Mm.26553	NM_010515	ENSMUSG00000023830	Igf2r	AI661837|CD222|CI-MPR|M6P/IGF2R|Mpr300	insulin-like growth factor 2 receptor	protein-coding
common_peak2-31954-24-53--0.961677599395752-2.00421908169978	chr9	65346105	65347269	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	37943	NM_138584	27965	Mm.272475	NM_138584	ENSMUSG00000032388	Spg21	ACP33|BM-019|C78576|D9Wsu18e|GL010|MAST	spastic paraplegia 21 homolog (human)	protein-coding
unique_peak2-38305-7-15--1.20090916970181-0.947446088118041	chr6	137581480	137582068	+	0	NA	intron (NM_007945, intron 1 of 21)	intron (NM_007945, intron 1 of 21)	16032	NM_001271588	13860	Mm.235346	NM_007945	ENSMUSG00000015766	Eps8	AW261790	epidermal growth factor receptor pathway substrate 8	protein-coding
common_peak2-31165-20-18-0.240147271147608-0.388034239052786	chr8	45628529	45629359	+	0	NA	Intergenic	Intergenic	-406618	NM_001081286	14107	Mm.27365	NM_001081286	ENSMUSG00000070047	Fat1	2310038E12Rik|AU023433|Fath|mFat1	FAT tumor suppressor homolog 1 (Drosophila)	protein-coding
unique_peak2-38327-8-11--0.579740082773585-1.14218153353838	chr6	147506854	147507341	+	0	NA	intron (NM_025911, intron 6 of 12)	intron (NM_025911, intron 6 of 12)	82704	NM_025911	67015	Mm.209774	NM_025911	ENSMUSG00000030301	Ccdc91	1700086G08Rik|1810060J02Rik|AU045683|AW555238|p56	coiled-coil domain containing 91	protein-coding
common_peak2-23759-7-7--0.200909169701811-0.97990265578305	chr15	97964209	97964558	+	0	NA	TTS (NM_001170711)	TTS (NM_001170711)	11750	NM_030121	78541	Mm.200766	NM_030121	ENSMUSG00000048175	Asb8	4930539L19Rik|AI788835|C430011H06Rik	ankyrin repeat and SOCS box-containing 8	protein-coding
common_peak2-31902-73-122--0.250119498914018-0.64984593195523	chr9	57764255	57766006	+	0	NA	intron (NM_027086, intron 3 of 10)	intron (NM_027086, intron 3 of 10)	6337	NM_001122873	69459	Mm.41735	NM_027086	ENSMUSG00000055720	Ubl7	2300004C15Rik	ubiquitin-like 7 (bone marrow stromal cell-derived)	protein-coding
common_peak1-8844-36-35-0.309396084725442-0.573175361577103	chr11	29547297	29548787	+	0	NA	Intergenic	Intergenic	-44856	NM_194053	68585	Mm.192580	NM_024226	ENSMUSG00000020458	Rtn4	1110020G17Rik|AA407876|AA409940|AA960376|ASY|C130026I10Rik|NOGO|NSP-CL|NgA|Nogo-A|Nogo-B|Nogo-C|mKIAA0886|mKIAA4153	reticulon 4	protein-coding
unique_peak2-37653-8-16--1.08224042330277-0.891319708951328	chr5	91517858	91518569	+	0	NA	exon (NM_007950, exon 4 of 5)	exon (NM_007950, exon 4 of 5)	14570	NM_007950	13874	Mm.4791	NM_007950	ENSMUSG00000029377	Ereg	EPR	epiregulin	protein-coding
unique_peak2-36490-5-7--0.704380336005853-1.01466476204226	chr2	153269036	153269468	+	0	NA	intron (NM_001134300, intron 4 of 10)	intron (NM_001134300, intron 4 of 10)	963	NM_001001986	329540	Mm.50600	NM_001001986	ENSMUSG00000061411	Nol4l	4931410H15|8430427H17Rik|AI429157|Gm1636	nucleolar protein 4-like	protein-coding
common_peak2-28952-17-12-0.517856620063946-0.647240723060192	chr5	100518474	100518985	+	0	NA	intron (NM_182841, intron 5 of 7)	intron (NM_182841, intron 5 of 7)	11748	NR_045993	76003	Mm.447060	NR_045993	ENSMUSG00000086259	Tmem150cos	5830403M04Rik	transmembrane protein 150C, opposite strand	ncRNA
common_peak1-15666-17-18--0.0296311752385474-0.306899554715732	chr4	136434312	136435046	+	0	NA	Intergenic	Intergenic	7413	NM_009777	12260	Mm.2570	NM_009777	ENSMUSG00000036905	C1qb	-	complement component 1, q subcomponent, beta polypeptide	protein-coding
unique_peak1-3291-12-3-1.64877598508764-2.36932189928148	chr18	75373452	75374090	+	0	NA	intron (NM_027727, intron 14 of 16)	intron (NM_027727, intron 14 of 16)	83200	NR_045394	100503117	Mm.250517	NR_045393		2010010A06Rik	5033420E22Rik	RIKEN cDNA 2010010A06 gene	ncRNA
common_peak1-7881-121-101-0.894940439906503-6.30754187206781	chr1	134091887	134094280	+	0	NA	intron (NM_001033250, intron 1 of 3)	intron (NM_001033250, intron 1 of 3)	-1582	NR_029777	723818		NR_029777	miRBase:MI0000646	Mir135b	Mirn135b	microRNA 135b	ncRNA
unique_peak2-33479-6-13--1.2419568116773-1.58711810488664	chr11	69846028	69846495	+	0	NA	intron (NM_001109752, intron 8 of 19)	B4A|SINE|B4	14154	NM_007864	13385	Mm.27256	NM_007864	ENSMUSG00000020886	Dlg4	Dlgh4|PSD-95|PSD95|SAP90|SAP90A	discs, large homolog 4 (Drosophila)	protein-coding
unique_peak2-39757-8-14--0.901668177660948-0.660903317613906	chrX	75874067	75874667	+	0	NA	Intergenic	RLTR25B|LTR|ERVK	-45131	NM_027322	546336	Mm.211712	NM_027322	ENSMUSG00000047996	Prrg1	2010007L08Rik	proline rich Gla (G-carboxyglutamic acid) 1	protein-coding
unique_peak1-1673-7-1-1.79909083029819-1.80617997398389	chr13	69541809	69542333	+	0	NA	Intergenic	Intergenic	130671	NM_198600	210106	Mm.315959	NM_198600	ENSMUSG00000034575	Papd7	LAK-1|POLK|Pols|TRF4|TRF4-1	PAP associated domain containing 7	protein-coding
common_peak1-19011-12-15--0.351224014912361-0.332077462497413	chr9	62122259	62122720	+	0	NA	intron (NM_025721, intron 1 of 1)	intron (NM_025721, intron 1 of 1)	7497	NM_025721	66712	Mm.263615	NM_025721	ENSMUSG00000046846	Spesp1	4921508E09Rik|AI428149	sperm equatorial segment protein 1	protein-coding
common_peak2-22150-9-8-0.0196884049619079-1.03275496310833	chr12	86823963	86824341	+	0	NA	Intergenic	Intergenic	9301	NM_010234	14281	Mm.246513	NM_010234	ENSMUSG00000021250	Fos	D12Rfj1|c-fos|cFos	FBJ osteosarcoma oncogene	protein-coding
common_peak1-14247-63-88--0.037420839895808-0.302270843793743	chr2	154612772	154614491	+	0	NA	Intergenic	B3|SINE|B2	-3215	NM_001139512	19383	Mm.221440	NM_023130	ENSMUSG00000027593	Raly	AI663842|Merc	hnRNP-associated with lethal yellow	protein-coding
common_peak2-30077-109-129-0.363791868858747-1.36328554900616	chr6	134034763	134036602	+	0	NA	intron (NM_007961, intron 1 of 7)	L1MB3|LINE|L1	49957	NM_007961	14011	Mm.269995	NM_007961	ENSMUSG00000030199	Etv6	AW123102|AW557856|Tel	ets variant 6	protein-coding
unique_peak1-2373-6-1-1.5653981103803-1.56314192529759	chr15	95366669	95367112	+	0	NA	Intergenic	Intergenic	-8207	NM_001289653	54003	Mm.3959	NM_016743	ENSMUSG00000022454	Nell2	A330108N19Rik|R75516|mel91	NEL-like 2	protein-coding
unique_peak1-7181-9-4-0.867685311516858-1.36011389749466	chr9	62813373	62813908	+	0	NA	intron (NM_019663, intron 1 of 13)	intron (NM_019663, intron 1 of 13)	15046	NM_019663	56469	Mm.431253	NM_019663	ENSMUSG00000032405	Pias1	2900068C24Rik|Ddxbp1|GBP	protein inhibitor of activated STAT 1	protein-coding
common_peak2-27744-11-8-0.338768582809301-1.14218153353838	chr3	126921145	126921587	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	57143	NR_105029	100862268	Mm.444603	NR_105029	ENSMUSG00000097456	LOC100862268	-	uncharacterized LOC100862268	ncRNA
common_peak1-14421-11-11--0.0762689164695427-0.301029995663976	chr2	180217340	180217943	+	0	NA	Intergenic	URR1A|DNA|MER1_type	-17040	NM_018766	18216	Mm.301712	NM_018766	ENSMUSG00000027568	Ntsr1	NT-1R|NTR-1|NTR1	neurotensin receptor 1	protein-coding
unique_peak2-36529-4-12--1.72390023199434-1.85743853830261	chr2	163588594	163589210	+	0	NA	Intergenic	Intergenic	-12927	NM_001272052	11486	Mm.388	NM_007398	ENSMUSG00000017697	Ada	-	adenosine deaminase	protein-coding
common_peak2-22203-13-11-0.193509529916613-0.379391706698377	chr12	111039318	111039918	+	0	NA	Intergenic	L1M2|LINE|L1	53530	NR_037233	100499517		NR_037233	miRBase:MI0014035	Mir3072	mmu-mir-3072	microRNA 3072	ncRNA
common_peak2-26767-11-5-0.923731083530457-1.477227296591	chr2	141587873	141588301	+	0	NA	intron (NM_001013802, intron 7 of 18)	L1Md_T|LINE|L1	-1090875	NM_178382	71436	Mm.426781	NM_178382	ENSMUSG00000051379	Flrt3	5530600M07Rik|C430047I10Rik|mKIAA1469	fibronectin leucine rich transmembrane protein 3	protein-coding
common_peak1-12934-25-24-0.217993715570381-0.403610417161433	chr19	8928974	8930221	+	0	NA	Intergenic	RMER4B|LTR|ERVK	4322	NM_001013019	68852	Mm.265792	NM_001013019	ENSMUSG00000071656	Lrrn4cl	1110067I12Rik	LRRN4 C-terminal like	protein-coding
unique_peak2-36043-3-7--1.41398308995928-1.23214870625617	chr19	44931105	44931477	+	0	NA	Intergenic	Intergenic	-20863	NR_045315	73322	Mm.250457	NR_045315	ENSMUSG00000092369	1700039E22Rik	-	RIKEN cDNA 1700039E22 gene	ncRNA
unique_peak2-35874-1-9--2.94898510510411-2.31132995230379	chr18	80200093	80200529	+	0	NA	Intergenic	URR1B|DNA|MER1_type	-43323	NM_053117	93737	Mm.24678	NM_053117	ENSMUSG00000056214	Pard6g	2410049N21Rik|Par6a	par-6 family cell polarity regulator gamma	protein-coding
common_peak2-25375-28-69--1.0763238971235-3.12041931051542	chr18	84085022	84086557	+	0	NA	Intergenic	Intergenic	170165	NM_001081300	110796	Mm.102136	NM_001081300	ENSMUSG00000046982	Tshz1	5730407I04Rik|D18Bwg1409e|Mtsh1|NY-CO-33|Sdccag33|Tsh1|mKIAA4206|teashirt1	teashirt zinc finger family member 1	protein-coding
unique_peak2-35023-7-13--1.00826409175941-0.697979855752659	chr15	102376829	102377324	+	0	NA	intron (NM_146065, intron 8 of 10)	intron (NM_146065, intron 8 of 10)	-21703	NR_033409	54615	Mm.445915	NM_018787	ENSMUSG00000023052	Npff	-	neuropeptide FF-amide peptide precursor	protein-coding
common_peak2-24820-45-86--0.582585470503856-1.49084094315847	chr17	70851638	70854299	+	0	NA	intron (NM_027712, intron 1 of 9)	intron (NM_027712, intron 1 of 9)	-18482	NM_001128180	224997	Mm.311840	NM_027712	ENSMUSG00000003279	Dlgap1	4933422O14Rik|9630002F18|AI845682|AI848168|BB075781|D17Bwg0511e|GKAP/SAPAP|GKPA/SAPAP|Gkap|Sapap1|mKIAA4162	discs, large (Drosophila) homolog-associated protein 1	protein-coding
unique_peak1-5767-6-0-2.5653981103803-2.10720996964787	chr6	52840565	52841006	+	0	NA	intron (NM_173406, intron 2 of 4)	intron (NM_173406, intron 2 of 4)	18829	NM_001168277	231986	Mm.386865	NM_173406		Jazf1	AI591476|C820002C15|Jaz1|Tip27	JAZF zinc finger 1	protein-coding
common_peak2-23980-26-43--0.531532526478835-0.806432121853421	chr16	17927463	17928775	+	0	NA	exon (NM_153150, exon 1 of 9)	exon (NM_153150, exon 1 of 9)	193	NM_153150	13358	Mm.229291	NM_153150	ENSMUSG00000003528	Slc25a1	1300019P08Rik|2610100G11Rik|AI194714|Ctp|Dgsj|Slc20a3	solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1	protein-coding
unique_peak2-38565-3-8--1.58390809140159-1.39487600375387	chr7	65485910	65486320	+	0	NA	Intergenic	MTE2a|LTR|MaLR	-427457	NM_009728	11982	Mm.135129	NM_009728	ENSMUSG00000025324	Atp10a	Atp10c|pfatp	ATPase, class V, type 10A	protein-coding
unique_peak2-36652-1-4--1.94898510510411-1.10720996964787	chr3	18191240	18191508	+	0	NA	Intergenic	MMVL30-int|LTR|ERV1	-48036	NM_007825	13123	Mm.316000	NM_007825	ENSMUSG00000039519	Cyp7b1	AW261589|D3Ertd552e|hct-1	cytochrome P450, family 7, subfamily b, polypeptide 1	protein-coding
common_peak2-32284-7-13--1.00826409175941-0.697979855752659	chrX	20662951	20663314	+	0	NA	intron (NM_183185, intron 2 of 4)	intron (NM_183185, intron 2 of 4)	3223	NM_183185	245368	Mm.220470	NM_183185	ENSMUSG00000031079	Zfp300	D930016N04Rik	zinc finger protein 300	protein-coding
unique_peak1-2830-13-2-2.19350952991661-3.03832868024006	chr17	27360551	27361210	+	0	NA	Intergenic	Intergenic	-19497	NM_146075	224640	Mm.29689	NM_146075	ENSMUSG00000044857	Lemd2	BC026588|Lem2|NET25	LEM domain containing 2	protein-coding
common_peak1-9630-13-10-0.319040412000471-0.446472590016315	chr12	8863672	8864385	+	0	NA	Intergenic	Intergenic	-64085	NM_008640	17775	Mm.30071	NM_008640	ENSMUSG00000020585	Laptm4a	AA286466|LAPTM4|MTP|Mtrp|mKIAA0108	lysosomal-associated protein transmembrane 4A	protein-coding
unique_peak1-800-7-1-1.79909083029819-1.80617997398389	chr11	3265038	3265489	+	0	NA	intron (NM_010718, intron 2 of 15)	(GA)n|Simple_repeat|Simple_repeat	6132	NM_173053	16886	Mm.124176	NM_010718	ENSMUSG00000020451	Limk2	Limk-2	LIM motif-containing protein kinase 2	protein-coding
common_peak2-20408-16-17--0.0516613591742505-0.301029995663984	chr10	24638874	24639623	+	0	NA	intron (NM_007482, intron 3 of 7)	intron (NM_007482, intron 3 of 7)	8028	NM_007482	11846	Mm.154144	NM_007482	ENSMUSG00000019987	Arg1	AI|AI256583|Arg-1|PGIF	arginase, liver	protein-coding
common_peak1-9796-21-13-0.762134343208631-1.0220094258199	chr12	65172332	65173211	+	0	NA	Intergenic	L1_Mus1|LINE|L1	403114	NM_001163271	623046	Mm.189552	NM_001163271	ENSMUSG00000043060	Fscb	EG623046	fibrous sheath CABYR binding protein	protein-coding
unique_peak2-38450-4-8--1.19338551529556-1.21878474469819	chr7	28380424	28380841	+	0	NA	intron (NM_001110208, intron 1 of 13)	B1_Mur1|SINE|Alu	4053	NM_001110208	11652	Mm.177194	NM_007434	ENSMUSG00000004056	Akt2	2410016A19Rik|AW554154|PKB|PKBbeta	thymoma viral proto-oncogene 2	protein-coding
common_peak1-8468-9-9--0.132314688483142-1.03275496310833	chr10	80140897	80141448	+	0	NA	Intergenic	Intergenic	-6451	NM_021462	17347	Mm.42126	NM_021462	ENSMUSG00000020190	Mknk2	2010016G11Rik|Gprk7|Mnk2	MAP kinase-interacting serine/threonine kinase 2	protein-coding
unique_peak2-33478-3-15--2.41398308995928-2.80787975886178	chr11	69838536	69839074	+	0	NA	intron (NM_001109752, intron 1 of 19)	ID_B1|SINE|B4	6698	NM_007864	13385	Mm.27256	NM_007864	ENSMUSG00000020886	Dlg4	Dlgh4|PSD-95|PSD95|SAP90|SAP90A	discs, large homolog 4 (Drosophila)	protein-coding
common_peak2-23449-13-10-0.319040412000471-0.446472590016315	chr15	64312260	64312813	+	0	NA	Intergenic	Intergenic	-98055	NM_010026	13196	Mm.277236	NM_010026	ENSMUSG00000022377	Asap1	AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19	ArfGAP with SH3 domain, ankyrin repeat and PH domain1	protein-coding
unique_peak1-2791-20-6-1.68071986253359-2.41165147706372	chr17	13657648	13658729	+	0	NA	Intergenic	Intergenic	-56134	NR_030763	272667	Mm.444718	NR_030763	ENSMUSG00000079711	Smok4a	4930513D10Rik|Smok2c	sperm motility kinase 4A	pseudo
common_peak2-27707-47-62--0.042438498733369-0.302795439836264	chr3	122292790	122293887	+	0	NA	intron (NM_001114665, intron 1 of 15)	MLT2D|LTR|ERVL	29294	NM_001114665	214459	Mm.209491	NM_153118	ENSMUSG00000039735	Fnbp1l	2610318I01Rik|AW548221|TOCA1|toca-1	formin binding protein 1-like	protein-coding
common_peak1-19335-14-13-0.0918612383000403-0.332077462497413	chrX	107150813	107151619	+	0	NA	Intergenic	L1_Mus2|LINE|L1	-416876	NR_033597	634340	Mm.66709	NR_033597	ENSMUSG00000082853	Gm7134	EG634340	kinesin family member 18B pseudogene	pseudo
common_peak1-8340-10-16--0.73104749624157-0.604422558181019	chr10	45577676	45578324	+	0	NA	Intergenic	RMER1C|Other|Other	50490	NR_040624	320363	Mm.123343	NR_040624		D030045P18Rik	-	RIKEN cDNA D030045P18 gene	ncRNA
common_peak1-12488-17-15-0.218296338205038-0.403453972741633	chr17	87106000	87107093	+	0	NA	Intergenic	Intergenic	-46658	NM_010137	13819	Mm.1415	NM_010137	ENSMUSG00000024140	Epas1	HIF-2alpha|HIF2A|HLF|HRF|MOP2|bHLHe73	endothelial PAS domain protein 1	protein-coding
unique_peak2-35778-15-32--1.0322293688028-1.48160942223867	chr18	52465628	52466571	+	0	NA	Intergenic	RMER1B|Other|Other	-25091	NM_026286	67634	Mm.179144	NM_026286	ENSMUSG00000024510	Ftmt	4930447C24Rik|FerH|Fth3|MtF	ferritin mitochondrial	protein-coding
unique_peak2-32719-3-10--1.87341470859657-1.75805390616669	chr1	156673819	156674371	+	0	NA	Intergenic	L1MEc|LINE|L1	-101045	NM_009782	12290	Mm.267517	NM_009782	ENSMUSG00000004110	Cacna1e	A430040I15|BII|Cach6|Cacnl1a6|Cav2.3|Cchra1|alpha1E	calcium channel, voltage-dependent, R type, alpha 1E subunit	protein-coding
unique_peak1-2694-13-4-1.45654393575041-2.23384849113406	chr16	78249023	78249852	+	0	NA	Intergenic	Intergenic	6262	NR_045698	100503619	Mm.387531	NR_045698		E330011O21Rik	-	RIKEN cDNA E330011O21 gene	ncRNA
unique_peak1-7198-8-1-2.00522241794757-2.05605744720049	chr9	66172648	66173172	+	0	NA	Intergenic	ORR1E|LTR|MaLR	-25347	NM_145617	235439	Mm.244179	NM_145617	ENSMUSG00000038664	Herc1	2810449H11Rik|B230218H07|D130015N03Rik|tbl	hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1	protein-coding
common_peak2-20578-12-17--0.521149016354673-0.417187467413082	chr10	77259283	77259918	+	0	NA	intron (NM_001287074, intron 1 of 11)	intron (NM_001287074, intron 1 of 11)	2278	NM_001205034	100503388	Mm.482880	NM_001205034	ENSMUSG00000096380	Gm19668	-	predicted gene, 19668	protein-coding
unique_peak2-36027-12-10-0.189344366450341-0.386243247519795	chr19	42753421	42753954	+	0	NA	Intergenic	Intergenic	-66391	NM_053083	67573	Mm.178767	NM_053083	ENSMUSG00000025185	Loxl4	4833426I20Rik|Loxc	lysyl oxidase-like 4	protein-coding
common_peak2-19977-10-5-0.771452844287613-1.33892459842472	chr1	133241001	133241374	+	0	NA	intron (NM_001081011, intron 9 of 22)	intron (NM_001081011, intron 9 of 22)	-65047	NM_019777	56489	Mm.386783	NM_019777	ENSMUSG00000042349	Ikbke	AW558201|IKK-i|IKKepsilon|Ikki	inhibitor of kappaB kinase epsilon	protein-coding
common_peak2-24226-7-6--0.00826409175941478-0.97990265578305	chr16	85173853	85174112	+	0	NA	promoter-TSS (NM_007471)	promoter-TSS (NM_007471)	-30	NM_001198826	11820	Mm.277585	NM_007471	ENSMUSG00000022892	App	Abeta|Abpp|Adap|Ag|Cvap|E030013M08Rik|betaApp	amyloid beta (A4) precursor protein	protein-coding
common_peak1-11007-11-7-0.508693584251613-1.21681515183528	chr15	36920871	36921309	+	0	NA	Intergenic	Intergenic	16067	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
common_peak2-26938-3-6--1.22133801201688-1.08602067057793	chr2	164440068	164440446	+	0	NA	intron (NM_001012725, intron 1 of 3)	intron (NM_001012725, intron 1 of 3)	1057	NM_001012725	433502	Mm.376157	NM_001012725	ENSMUSG00000070531	Wfdc6b	WAP6b|Wfdc6	WAP four-disulfide core domain 6B	protein-coding
unique_peak2-37566-1-6--2.43441193227435-1.56314192529759	chr5	33273572	33273887	+	0	NA	intron (NM_001025426, intron 25 of 42)	intron (NM_001025426, intron 25 of 42)	67359	NM_001025426	277854	Mm.101524	NM_177786	ENSMUSG00000037426	Depdc5	AV016528	DEP domain containing 5	protein-coding
common_peak2-23767-55-70-0.0548727516480199-0.32516057065155	chr15	98608621	98610404	+	0	NA	promoter-TSS (NM_011718)	promoter-TSS (NM_011718)	-931	NM_011718	22410	Mm.4709	NM_011718	ENSMUSG00000022996	Wnt10b	Wnt12	wingless-type MMTV integration site family, member 10B	protein-coding
unique_peak2-39278-4-5--0.608423014574403-0.909929411522249	chr8	121895724	121895968	+	0	NA	Intergenic	(TA)n|Simple_repeat|Simple_repeat	-22946	NM_019966	56690	Mm.423037	NM_019966	ENSMUSG00000074064	Mlycd	AI324784|Mcd	malonyl-CoA decarboxylase	protein-coding
common_peak1-14153-70-123--0.334229394011476-0.916450677904792	chr2	132577176	132578565	+	0	NA	Intergenic	Intergenic	-29144	NM_007694	12653	Mm.255241	NM_007694	ENSMUSG00000027350	Chgb	Scg-1	chromogranin B	protein-coding
unique_peak1-5654-9-1-2.18961340640422-2.31132995230379	chr6	30026324	30026805	+	0	NA	intron (NM_001164229, intron 1 of 12)	B1_Mus1|SINE|Alu	243	NM_001164229	18181	Mm.259258	NM_010938	ENSMUSG00000058440	Nrf1	C87038|D6Ertd415e	nuclear respiratory factor 1	protein-coding
unique_peak2-34028-1-5--2.2120195109379-1.32905871926422	chr12	110168685	110169102	+	0	NA	intron (NM_177602, intron 2 of 6)	intron (NM_177602, intron 2 of 6)	36411	NM_177602	212198	Mm.342082	NM_177602	ENSMUSG00000040877	Wdr25	B930090D16Rik	WD repeat domain 25	protein-coding
common_peak2-28170-54-73--0.0363676039992162-0.302527574714518	chr4	108779958	108781197	+	0	NA	intron (NM_133885, intron 4 of 22)	intron (NM_133885, intron 4 of 22)	10064	NM_173350	100273	Mm.366315	NM_133885	ENSMUSG00000028559	Osbpl9	2600011I06Rik|AU015843|Orp-9	oxysterol binding protein-like 9	protein-coding
common_peak1-15869-46-128--1.11323131217445-5.76494465686635	chr5	5380026	5381052	+	0	NA	promoter-TSS (NM_011074)	promoter-TSS (NM_011074)	-288	NM_011074	18647	Mm.389061	NM_011074	ENSMUSG00000028926	Cdk14	Pftk1|mKIAA0834	cyclin-dependent kinase 14	protein-coding
common_peak1-13362-55-89--0.287233225176973-0.601197622537264	chr19	45782710	45783771	+	0	NA	Intergenic	Intergenic	21808	NR_045307	71232	Mm.50944	NR_045307		4933429K18Rik	-	RIKEN cDNA 4933429K18 gene	ncRNA
common_peak1-14555-12-8-0.478850983645327-0.562038191119709	chr3	36000035	36000766	+	0	NA	Intergenic	RMER16-int|LTR|ERVK	35478	NM_172678	229211	Mm.260997	NM_172678		Acad9	2600017P15Rik|4732402K02|C630012L17Rik|NPD002	acyl-Coenzyme A dehydrogenase family, member 9	protein-coding
unique_peak1-5526-21-2-2.98452676454508-5.06563262809273	chr5	139332334	139333553	+	0	NA	Intergenic	Intergenic	36909	NM_001195128	384244	Mm.485002	NM_001195128	ENSMUSG00000094504	Gm5294	EG384244	predicted gene 5294	protein-coding
common_peak1-9305-12-11-0.0638134843664826-0.337263207250336	chr11	93988685	93989128	+	0	NA	Intergenic	IAPLTR2_Mm|LTR|ERVK	83387	NM_001025429	70834	Mm.260737	NM_027569	ENSMUSG00000020859	Spag9	3110018C07Rik|4733401I23Rik|4831406C20Rik|AW552012|JLP|JSAP2|JSAP2a|Jip4|Mapk8ip4|syd1	sperm associated antigen 9	protein-coding
common_peak2-27176-13-24--0.865384159136956-0.879255460030357	chr3	34080833	34081544	+	0	NA	Intergenic	L1Md_T|LINE|L1	-100912	NM_026332	67713	Mm.274266	NM_026332	ENSMUSG00000027679	Dnajc19	1810055D05Rik|AA959924|Tim14	DnaJ (Hsp40) homolog, subfamily C, member 19	protein-coding
unique_peak1-2407-8-1-2.00522241794757-2.05605744720049	chr15	98932180	98932544	+	0	NA	intron (NM_176835, intron 2 of 2)	intron (NM_176835, intron 2 of 2)	2447	NM_176835	72778	Mm.30544	NM_176835	ENSMUSG00000038009	Dnajc22	2810451A06Rik|AI506245	DnaJ (Hsp40) homolog, subfamily C, member 22	protein-coding
unique_peak2-37240-1-8--2.79698201165906-2.05605744720049	chr4	92605809	92606259	+	0	NA	Intergenic	Intergenic	396168	NM_026954	69136	Mm.171558	NM_026954	ENSMUSG00000054000	Tusc1	2200001D17Rik|TSG-9	tumor suppressor candidate 1	protein-coding
common_peak2-21525-13-6-0.971117108580164-1.01572999746118	chr11	94677057	94677398	+	0	NA	intron (NM_001163172, intron 1 of 4)	intron (NM_001163172, intron 1 of 4)	16089	NM_001163172	544806	Mm.379774	NM_001034896	ENSMUSG00000075610	Tmem92	AU016430|Tmem92-ps	transmembrane protein 92	protein-coding
common_peak2-29761-31-34-0.095955653868157-0.328563898667783	chr6	87042050	87042750	+	0	NA	TTS (NM_013528)	TTS (NM_013528)	-12340	NM_001167938	52372	Mm.282851	NM_001167937		D6Ertd527e	AU043841	DNA segment, Chr 6, ERATO Doi 527, expressed	protein-coding
common_peak1-8418-19-54--1.37867238686297-3.56455313593768	chr10	75211895	75212689	+	0	NA	intron (NM_172549, intron 7 of 36)	MTC|LTR|MaLR	14810	NM_172549	104248	Mm.257404	NM_172549	ENSMUSG00000020196	Cabin1	A330070M20Rik|Cain|Ppp3in	calcineurin binding protein 1	protein-coding
common_peak1-13170-13-10-0.319040412000471-0.446472590016315	chr19	11965843	11966383	+	0	NA	Intergenic	Intergenic	-4400	NM_146410	258405	Mm.358933	NM_146410	ENSMUSG00000060878	Olfr1420	MOR266-4	olfactory receptor 1420	protein-coding
unique_peak1-6871-10-3-1.35641534500877-1.75805390616669	chr8	88295117	88295663	+	0	NA	intron (NM_028007, intron 8 of 17)	intron (NM_028007, intron 8 of 17)	69458	NM_028007	71927	Mm.61018	NM_028007	ENSMUSG00000031703	Itfg1	2310047C21Rik|AI314457|Cda08|D8Wsu49e	integrin alpha FG-GAP repeat containing 1	protein-coding
common_peak1-10884-70-65-0.575572797016945-1.76186337069789	chr15	80132824	80134607	+	0	NA	intron (NM_001044308, intron 2 of 36)	intron (NM_001044308, intron 2 of 36)	16047	NM_001044308	239556	Mm.291058	NM_001044308	ENSMUSG00000022416	Cacna1i	Ca(V)3.3	calcium channel, voltage-dependent, alpha 1I subunit	protein-coding
common_peak2-26823-11-26--1.24619391791185-1.66030262873422	chr2	152669371	152670083	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	-3973	NM_001141975	72119	Mm.407737	NM_028109	ENSMUSG00000027469	Tpx2	2610005B21Rik|DIL2|REPP86|p100	TPX2, microtubule-associated protein homolog (Xenopus laevis)	protein-coding
common_peak2-26079-8-16--1.08224042330277-0.891319708951328	chr2	134643508	134644153	+	0	NA	intron (NM_001145830, intron 2 of 31)	CT-rich|Low_complexity|Low_complexity	31930	NM_001145830	18795	Mm.330607	NM_019677	ENSMUSG00000051177	Plcb1	3110043I21Rik|AI132408|Plcb|mKIAA0581	phospholipase C, beta 1	protein-coding
unique_peak1-6648-12-4-1.32684789020028-2.04196296489515	chr8	11393196	11393711	+	0	NA	intron (NM_009932, intron 4 of 47)	intron (NM_009932, intron 4 of 47)	80624	NM_009932	12827	Mm.181021	NM_009932	ENSMUSG00000031503	Col4a2	Col4a-2	collagen, type IV, alpha 2	protein-coding
common_peak2-25293-14-15--0.100783839642355-0.301029995663982	chr18	70052775	70053463	+	0	NA	Intergenic	Intergenic	-32094	NM_201362	381175	Mm.266831	NM_201362	ENSMUSG00000038903	Ccdc68	BC046343	coiled-coil domain containing 68	protein-coding
common_peak1-17432-39-30-0.661564936532279-1.30310500416066	chr7	16046352	16047786	+	0	NA	Intergenic	L1Md_A|LINE|L1	72869	NM_145708	246792	Mm.26391	NM_145708	ENSMUSG00000074369	Obox2	-	oocyte specific homeobox 2	protein-coding
common_peak1-9493-38-23-0.986490158577374-2.25413655118513	chr11	108365287	108366745	+	0	NA	intron (NM_029606, intron 11 of 27)	intron (NM_029606, intron 11 of 27)	79436	NM_029606	76380	Mm.344071	NM_029586	ENSMUSG00000020728	Cep112	1700001M19Rik|1700029K01Rik|8430407H02Rik|AV043680|AV207351|Ccdc46|Macoco	centrosomal protein 112	protein-coding
common_peak1-17603-10-16--0.73104749624157-0.604422558181019	chr7	44928999	44929513	+	0	NA	Intergenic	Intergenic	1590648	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak2-39497-11-25--1.19174613388948-1.51503956548638	chr9	59750855	59751658	+	0	NA	intron (NM_173018, intron 35 of 43)	B1_Mur2|SINE|Alu	46630	NM_013708	23958	Mm.103641	NM_013708	ENSMUSG00000032292	Nr2e3	A930035N01Rik|PNR|RNR|rd7	nuclear receptor subfamily 2, group E, member 3	protein-coding
common_peak2-20617-9-7-0.18961340640422-1.05908390183068	chr10	80140922	80141409	+	0	NA	Intergenic	Intergenic	-6444	NM_021462	17347	Mm.42126	NM_021462	ENSMUSG00000020190	Mknk2	2010016G11Rik|Gprk7|Mnk2	MAP kinase-interacting serine/threonine kinase 2	protein-coding
unique_peak1-6365-9-5-0.604650905683064-1.21398586181642	chr7	66593954	66594408	+	0	NA	Intergenic	URR1A|DNA|MER1_type	-14662	NR_015479	330544	Mm.9002	NR_015479		C230091D08Rik	-	RIKEN cDNA C230091D08 gene	ncRNA
common_peak1-13615-47-40-0.577289420148464-1.25612039445446	chr2	23155667	23157031	+	0	NA	Intergenic	L1Md_F3|LINE|L1	-20417	NM_008752	18232	Mm.131616	NM_008752	ENSMUSG00000069132	Nxph2	-	neurexophilin 2	protein-coding
common_peak1-10984-50-46-0.486351464801315-1.0807309740853	chr15	34237506	34239004	+	0	NA	intron (NM_016762, intron 1 of 18)	intron (NM_016762, intron 1 of 18)	1819	NM_016762	17181	Mm.396856	NM_016762	ENSMUSG00000022324	Matn2	Crtm2|matrilin-2	matrilin 2	protein-coding
unique_peak2-33952-13-27--1.02888289141984-1.21173582416604	chr12	78952212	78953148	+	0	NA	Intergenic	Intergenic	-374962	NM_172952	268566	Mm.341742	NM_145965	ENSMUSG00000047454	Gphn	5730552E08Rik|AI662856|BC027112|C230040D23|GPH|GPHRYN|geph	gephyrin	protein-coding
common_peak1-18477-12-10-0.189344366450341-0.386243247519795	chr8	84798982	84799598	+	0	NA	Intergenic	Intergenic	127195	NM_001254747	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak1-13672-14-16--0.188246680892695-0.308035960714963	chr2	28513056	28513885	+	0	NA	intron (NM_001289575, intron 2 of 22)	intron (NM_001289575, intron 2 of 22)	16717	NM_022887	64930	Mm.224354	NM_022887	ENSMUSG00000026812	Tsc1	-	tuberous sclerosis 1	protein-coding
common_peak1-9386-28-20-0.660641697042702-1.00055860626307	chr11	98941520	98942679	+	0	NA	intron (NM_172564, intron 2 of 12)	intron (NM_172564, intron 2 of 12)	8521	NM_172564	217169	Mm.262067	NM_172564	ENSMUSG00000017607	Tns4	9930017A07Rik|AA589547|AU016405|Cten	tensin 4	protein-coding
common_peak1-9361-11-21--0.950738034385684-0.991115276827166	chr11	97659862	97660469	+	0	NA	promoter-TSS (NM_010688)	promoter-TSS (NM_010688)	-821	NM_010688	16796	Mm.271967	NM_010688	ENSMUSG00000038366	Lasp1	AA408629|Def-4|SH3P6|Tg(Col1a1-lacZ)1Ngma	LIM and SH3 protein 1	protein-coding
common_peak1-12091-25-42--0.564414849356992-0.820829064533854	chr17	25013581	25014622	+	0	NA	Intergenic	Intergenic	-1614	NM_008340	16005	Mm.3135	NM_008340	ENSMUSG00000046070	Igfals	ALS|Albs|mKIAA4111	insulin-like growth factor binding protein, acid labile subunit	protein-coding
unique_peak2-36002-6-5--0.0195643903408542-0.947717972411649	chr19	38016481	38016879	+	0	NA	intron (NM_001099634, intron 28 of 52)	intron (NM_001099634, intron 28 of 52)	101387	NM_001099634	226101	Mm.34674	NM_177035	ENSMUSG00000048612	Myof	2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3	myoferlin	protein-coding
common_peak1-7593-27-66--1.07454323956254-2.91651320486995	chr1	55131172	55131877	+	0	NA	Intergenic	Lx8|LINE|L1	13252	NM_010477	15510	Mm.1777	NM_010477	ENSMUSG00000025980	Hspd1	60kDa|Hsp60	heat shock protein 1 (chaperonin)	protein-coding
common_peak1-11158-49-41-0.613966400246423-1.40395959851644	chr15	75861759	75863214	+	0	NA	Intergenic	Intergenic	-17720	NM_134087	105732	Mm.267178	NM_134087	ENSMUSG00000046761	Fam83h	AA409316	family with sequence similarity 83, member H	protein-coding
common_peak2-31304-16-18--0.129663871175524-0.307235046933848	chr8	77132711	77133201	+	0	NA	Intergenic	Intergenic	-264117	NM_027837	71597	Mm.158735	NM_027837	ENSMUSG00000031621	Isx	9130012O13Rik|Pix-1	intestine specific homeobox	protein-coding
common_peak1-8323-15-10-0.552733131918359-0.604422558181019	chr10	43540314	43540964	+	0	NA	Intergenic	Intergenic	74675	NR_040581	69443	Mm.484042	NR_040581		1700027J07Rik	-	RIKEN cDNA 1700027J07 gene	ncRNA
common_peak1-8789-45-44-0.368504929015197-0.719613425717097	chr11	16507368	16508898	+	0	NA	Intergenic	RLTR13D6|LTR|ERVK	-99646	NM_001109971	20335	Mm.325350	NM_011343	ENSMUSG00000078974	Sec61g	-	SEC61, gamma subunit	protein-coding
unique_peak1-2900-10-2-1.77145284428761-2.09384600808989	chr17	45723813	45724385	+	0	NA	intron (NM_001199116, intron 11 of 12)	intron (NM_001199116, intron 11 of 12)	5243	NM_022880	63959	Mm.29744	NM_022880	ENSMUSG00000023942	Slc29a1	1200014D21Rik|AA407560|ENT1	solute carrier family 29 (nucleoside transporters), member 1	protein-coding
common_peak2-28275-44-47-0.236930333847379-0.510148353955622	chr4	129231547	129233257	+	0	NA	intron (NM_001162433, intron 9 of 12)	MIR|SINE|MIR	2653	NR_106199	102465997		NR_106199		Mir8119	mmu-mir-8119	microRNA mir-8119	ncRNA
common_peak2-27841-19-13-0.595332404604082-0.713635438203849	chr3	152143118	152143744	+	0	NA	intron (NM_001081277, intron 11 of 13)	B4A|SINE|B4	83783	NM_001287139	108946	Mm.379292	NM_198416	ENSMUSG00000039068	Zzz3	3110065C23Rik|6430567E01Rik|AA408566|AI481057|AW556059|R75514	zinc finger, ZZ domain containing 3	protein-coding
common_peak1-9001-15-9-0.690236655668294-0.732381977911291	chr11	60139919	60140938	+	0	NA	intron (NM_153080, intron 1 of 14)	B3A|SINE|B2	25979	NM_153080	216810	Mm.218875	NM_153080	ENSMUSG00000000538	Tom1l2	2900016I08Rik|A730055F12Rik|AU042072|Srebf1	target of myb1-like 2 (chicken)	protein-coding
common_peak1-15191-193-248-0.419123202544715-3.01107116016113	chr3	157533526	157535474	+	0	NA	Intergenic	Intergenic	53527	NM_145953	107869	Mm.28301	NM_145953	ENSMUSG00000028179	Cth	0610010I13Rik|AI314617|BC019483|CSE|Cys3	cystathionase (cystathionine gamma-lyase)	protein-coding
common_peak2-29968-45-44-0.368504929015197-0.719613425717097	chr6	119387882	119388791	+	0	NA	intron (NM_009525, intron 4 of 4)	intron (NM_009525, intron 4 of 4)	11068	NM_001271757	22419	Mm.321818	NM_009525	ENSMUSG00000030170	Wnt5b	AW545702|Wnt-5b	wingless-type MMTV integration site family, member 5B	protein-coding
unique_peak1-3757-10-2-1.77145284428761-2.09384600808989	chr19	53971659	53972190	+	0	NA	intron (NM_011050, intron 1 of 11)	intron (NM_011050, intron 1 of 11)	5203	NM_011050	18569	Mm.1605	NM_011050	ENSMUSG00000024975	Pdcd4	D19Ucla1|Ma3|Tis	programmed cell death 4	protein-coding
unique_peak1-5671-8-3-1.00522241794757-1.39487600375387	chr6	31093246	31093758	+	0	NA	intron (NR_110471, intron 2 of 3)	intron (NR_110471, intron 2 of 3)	74972	NR_110470	232685	Mm.443019	NM_144555		Lincpint	MNCb-1768|Pint|linc-Pint	long intergenic non-protein coding RNA, Trp53 induced transcript	ncRNA
common_peak2-31860-19-17-0.232762325219374-0.392630012299441	chr9	50775228	50775969	+	0	NA	intron (NM_178710, intron 3 of 15)	intron (NM_178710, intron 3 of 15)	41580	NM_178710	235344	Mm.104932	NM_178710	ENSMUSG00000037112	Sik2	G630080D20Rik|Snf1lk2	salt inducible kinase 2	protein-coding
unique_peak1-3824-17-5-1.63333383748388-2.19184853030482	chr2	128466725	128467592	+	0	NA	exon (NM_008569, exon 29 of 48)	exon (NM_008569, exon 29 of 48)	45973	NM_008569	17222	Mm.277408	NM_008569	ENSMUSG00000014355	Anapc1	2610021O03Rik|AI047775|AI853536|AW547281|Apc1|Mcpr|tsg24	anaphase promoting complex subunit 1	protein-coding
common_peak1-8873-25-23-0.27688740462395-0.451698068655807	chr11	40733756	40734734	+	0	NA	Intergenic	Intergenic	-165457	NM_009831	12450	Mm.2103	NM_009831	ENSMUSG00000020326	Ccng1	AI314029	cyclin G1	protein-coding
common_peak1-17867-28-67--1.03450372142888-2.86200135898774	chr7	114116873	114117739	+	0	NA	intron (NM_147035, intron 2 of 2)	intron (NM_147035, intron 2 of 2)	1659	NM_147035	259037	Mm.223420	NM_147035	ENSMUSG00000045013	Olfr711	MOR103-4	olfactory receptor 711	protein-coding
unique_peak2-34459-15-18--0.235762762887929-0.326591483156968	chr14	25842179	25843314	+	0	NA	Intergenic	Intergenic	119981	NR_045718	75862	Mm.109191	NR_045718		4930572O13Rik	-	RIKEN cDNA 4930572O13 gene	ncRNA
common_peak1-7913-24-45--0.730352053289296-1.16863888781394	chr1	136624825	136625593	+	0	NA	intron (NM_009307, intron 2 of 9)	intron (NM_009307, intron 2 of 9)	75089	NR_015606	329251	Mm.188709	NM_001081307	ENSMUSG00000073557	Ppp1r12b	1810037O03Rik|9530009M10Rik|AI132431|Mypt2	protein phosphatase 1, regulatory (inhibitor) subunit 12B	protein-coding
common_peak1-8452-9-13--0.617741515653384-0.459837087125828	chr10	79852979	79853500	+	0	NA	Intergenic	Intergenic	-2843	NM_198615	237400	Mm.268389	NM_198615	ENSMUSG00000048696	Mex3d	BC059858|Rkhd1	mex3 homolog D (C. elegans)	protein-coding
unique_peak1-2949-10-4-1.03448725012141-1.5150158574804	chr17	69229859	69230368	+	0	NA	Intergenic	Intergenic	43637	NM_001206661	622645	Mm.86422	NM_001206661	ENSMUSG00000095407	Tmem200c	EG622645|Gm6338	transmembrane protein 200C	protein-coding
common_peak2-23957-16-23--0.466698858453094-0.497202060940027	chr16	15862452	15863257	+	0	NA	exon (NM_029354, exon 1 of 3)	exon (NM_029354, exon 1 of 3)	561	NM_029354	72083	Mm.22351	NM_029354	ENSMUSG00000022671	Mzt2	2410018G20Rik|2610001E06Rik|Fam128|Fam128b	mitotic spindle organizing protein 2	protein-coding
unique_peak2-39675-16-26--0.636623859895407-0.713114929964887	chr9	108339231	108340269	+	0	NA	intron (NM_001004192, intron 1 of 3)	B3|SINE|B2	937	NM_001004192	434439	Mm.78372	NM_001004192	ENSMUSG00000050641	BC048562	-	cDNA sequence BC048562	protein-coding
common_peak2-31101-34-50--0.290356814970229-0.452279894471924	chr8	27042154	27043177	+	0	NA	intron (NM_008432, intron 24 of 26)	intron (NM_008432, intron 24 of 26)	44551	NM_029884	52120	Mm.28326	NM_029884	ENSMUSG00000037260	Hgsnat	9430010M12Rik|AW208455|D8Ertd354e|Tmem76	heparan-alpha-glucosaminide N-acetyltransferase	protein-coding
common_peak1-17190-38-22-1.04789070324152-2.44914526326141	chr6	124692799	124694424	+	0	NA	intron (NM_007881, intron 8 of 9)	intron (NM_007881, intron 8 of 9)	-2514	NM_013535	14790	Mm.439877	NM_013535		Grcc10	2310033H05Rik|C10	gene rich cluster, C10 gene	protein-coding
common_peak2-31252-20-56--1.34481522957355-3.62981913803281	chr8	70646018	70647131	+	0	NA	Intergenic	Intergenic	-148101	NM_177698	234353	Mm.32525	NM_027626	ENSMUSG00000030465	Psd3	4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D	pleckstrin and Sec7 domain containing 3	protein-coding
unique_peak1-4582-14-1-2.89921616035764-3.91338994363176	chr3	57383627	57384379	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-4171	NM_001168281	97064	Mm.405029	NM_133784	ENSMUSG00000027803	Wwtr1	2310058J06Rik|2610021I22Rik|C78399|Taz	WW domain containing transcription regulator 1	protein-coding
unique_peak2-33017-0-6--3.64748585253182-1.56314192529759	chr10	67287557	67287955	+	0	NA	Intergenic	Intergenic	87654	NM_178679	216049	Mm.268346	NM_178679	ENSMUSG00000037855	Zfp365	AI839779|AV340892|DBZ|Su48|Znf365|talanin	zinc finger protein 365	protein-coding
unique_peak1-6222-11-2-1.92373108353046-2.32232533660526	chr7	3451373	3451959	+	0	NA	Intergenic	L1MA7|LINE|L1	26243	NM_133183	54378	Mm.424047	NM_133183		Cacng6	2310033H20Rik|AW050150	calcium channel, voltage-dependent, gamma subunit 6	protein-coding
unique_peak2-33084-5-8--0.874305337448166-1.10484139239135	chr10	80115048	80115444	+	0	NA	intron (NM_145361, intron 1 of 8)	B4|SINE|B4	4570	NM_145361	208198	Mm.60720	NM_145361	ENSMUSG00000003344	Btbd2	2610037C03Rik|4930512K17Rik	BTB (POZ) domain containing 2	protein-coding
unique_peak2-32525-7-7--0.200909169701811-0.97990265578305	chr1	60169893	60170346	+	0	NA	intron (NM_001285463, intron 5 of 17)	MERVL_2A-int|LTR|ERVL	5192	NR_104344	241066	Mm.276441	NM_139150	ENSMUSG00000026017	Carf	Als2cr8|ECBRC-FC1|ECBRC-FC2	calcium response factor	protein-coding
common_peak1-9568-30-19-0.84774731460451-1.46094028072561	chr11	117962263	117963445	+	0	NA	intron (NM_001167746, intron 21 of 80)	B3|SINE|B2	27679	NM_001167746	69926	Mm.473893	NM_001167746	ENSMUSG00000033987	Dnah17	2810003K23Rik|Dnahc17|Dnahcl1|Gm1178|mKIAA3028	dynein, axonemal, heavy chain 17	protein-coding
common_peak2-26056-35-69--0.697912758482462-1.62370182176243	chr2	32422881	32424351	+	0	NA	3' UTR (NM_153560, exon 11 of 11)	3' UTR (NM_153560, exon 11 of 11)	-2762	NM_010073	13481	Mm.22001	NM_010073	ENSMUSG00000026810	Dpm2	AW557993|R75484	dolichol-phosphate (beta-D) mannosyltransferase 2	protein-coding
unique_peak2-35734-12-11-0.0638134843664826-0.337263207250336	chr18	35751711	35752259	+	0	NA	TTS (NM_010771)	TTS (NM_010771)	-6336	NM_026420	67869	Mm.126534	NM_026420	ENSMUSG00000037058	Paip2	2310050K10Rik|AU045972	polyadenylate-binding protein-interacting protein 2	protein-coding
unique_peak2-39294-4-4--0.345388608740609-0.864171920961574	chr8	123279173	123279520	+	0	NA	3' UTR (NM_008320, exon 9 of 9)	3' UTR (NM_008320, exon 9 of 9)	19070	NM_008320	15900	Mm.334861	NM_008320	ENSMUSG00000041515	Irf8	AI893568|ICSBP|IRF-8|Icsbp1|Myls	interferon regulatory factor 8	protein-coding
unique_peak2-34188-3-6--1.22133801201688-1.08602067057793	chr13	36733000	36733356	+	0	NA	Intergenic	Lx7|LINE|L1	93168	NM_153529	68404	Mm.232930	NM_153529	ENSMUSG00000039114	Nrn1	0710008J23Rik|Cpg15|Nrn	neuritin 1	protein-coding
unique_peak2-35961-2-7--1.91745425626332-1.45399745587252	chr19	17160269	17160570	+	0	NA	intron (NM_181348, intron 6 of 19)	intron (NM_181348, intron 6 of 19)	129811	NM_181348	353211	Mm.257354	NM_181348	ENSMUSG00000039126	Prune2	6330414G02Rik|A230083H22Rik|A330102H22Rik|Bmcc1|mKIAA0367	prune homolog 2 (Drosophila)	protein-coding
common_peak1-14925-19-32--0.641706792696767-0.800403172662453	chr3	100922286	100923001	+	0	NA	Intergenic	L1Md_A|LINE|L1	-8554	NM_011197	19221	Mm.24807	NM_011197	ENSMUSG00000027864	Ptgfrn	4833445A08Rik|AU042434|CD9P-1|FPRP|Trim45	prostaglandin F2 receptor negative regulator	protein-coding
unique_peak1-2794-12-5-1.06381348436648-1.78669045979184	chr17	13732562	13733269	+	0	NA	intron (NR_045437, intron 2 of 3)	intron (NR_045437, intron 2 of 3)	14045	NR_045436	72578	Mm.46549	NR_045436	ENSMUSG00000038347	2700054A10Rik	-	RIKEN cDNA 2700054A10 gene	ncRNA
common_peak1-15794-57-73-0.0565796744499787-0.324195113983386	chr4	155812190	155813258	+	0	NA	Intergenic	Intergenic	-203758	NM_198305	231003	Mm.423038	NM_198305	ENSMUSG00000078484	Klhl17	AL022703|BC058738	kelch-like 17	protein-coding
common_peak1-15199-55-74--0.0241988193431784-0.301029995664056	chr4	136052487	136053546	+	0	NA	intron (NM_024452, intron 1 of 4)	B1F2|SINE|Alu	27340	NM_024452	269593	Mm.485824	NM_024452	ENSMUSG00000001089	Luzp1	2700072H04Rik|AI266952|Luzp|mFLJ00226	leucine zipper protein 1	protein-coding
common_peak2-20128-11-22--1.0148683718054-1.11267835143409	chr1	165461074	165461752	+	0	NA	Intergenic	Intergenic	-127641	NM_178883	98376	Mm.32901	NM_178883	ENSMUSG00000040124	Gorab	AI467484|NTKL-BP1|Scyl1bp1	golgin, RAB6-interacting	protein-coding
unique_peak1-2512-9-1-2.18961340640422-2.31132995230379	chr16	17409235	17409787	+	0	NA	intron (NM_023348, intron 1 of 4)	intron (NM_023348, intron 1 of 4)	-3104	NM_001001983	224020	Mm.5718	NM_001001983	ENSMUSG00000041720	Pi4ka	Pik4ca	phosphatidylinositol 4-kinase, catalytic, alpha polypeptide	protein-coding
common_peak1-14475-25-24-0.217993715570381-0.403610417161433	chr3	121617145	121618438	+	0	NA	Intergenic	Intergenic	-38453	NM_172525	214137	Mm.229287	NM_172525	ENSMUSG00000039831	Arhgap29	6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1	Rho GTPase activating protein 29	protein-coding
unique_peak2-38359-6-14--1.34149248522822-1.01572999746118	chr7	4164084	4164727	+	0	NA	Intergenic	Intergenic	-24951	NM_001081239	232801	Mm.258061	NM_001081239	ENSMUSG00000070873	Lilra5	E030017K20|EG232801|Gm4878|Lilrc1	leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5	protein-coding
common_peak1-9049-8-10--0.454209200689727-1.078512453669	chr11	67860348	67860872	+	0	NA	intron (NM_018768, intron 6 of 7)	intron (NM_018768, intron 6 of 7)	80625	NM_018768	55943	Mm.3973	NM_018768	ENSMUSG00000020903	Stx8	0610007H08Rik|1110002H11Rik|4930571E13Rik|CARB	syntaxin 8	protein-coding
unique_peak1-361-6-1-1.5653981103803-1.56314192529759	chr1	138537482	138538009	+	0	NA	Intergenic	ORR1A2-int|LTR|MaLR	16267	NM_001160251	226442	Mm.62521	NM_177643	ENSMUSG00000041483	Zfp281	Znf281	zinc finger protein 281	protein-coding
common_peak1-10914-14-7-0.899216160357645-0.947446088118041	chr15	5195807	5196507	+	0	NA	Intergenic	Intergenic	-1970	NM_008965	19219	Mm.18509	NM_008965	ENSMUSG00000039942	Ptger4	EP4|Ptgerep4	prostaglandin E receptor 4 (subtype EP4)	protein-coding
unique_peak2-39289-2-6--1.72480917832092-1.26211192963361	chr8	122809459	122809931	+	0	NA	Intergenic	L1MB8|LINE|L1	-57565	NR_110496	434353	Mm.411793	NR_110496		A330074K22Rik	-	RIKEN cDNA A330074K22 gene	ncRNA
common_peak2-20038-18-23--0.272043349492805-0.34651636097721	chr1	138856242	138856865	+	0	NA	intron (NM_030676, intron 1 of 8)	B1_Mus2|SINE|Alu	472	NM_030676	26424	Mm.16794	NM_030676	ENSMUSG00000026398	Nr5a2	AU020803|D1Ertd308e|Ftf|LRH-1|UF2-H3B	nuclear receptor subfamily 5, group A, member 2	protein-coding
common_peak2-30393-55-77--0.0807823477095466-0.313973398029927	chr7	30956016	30957822	+	0	NA	intron (NM_001033540, intron 1 of 2)	B1_Mus1|SINE|Alu	1978	NM_001033540	330503	Mm.434058	NM_001033540	ENSMUSG00000066647	Gm5113	B430201F14|EG330503	predicted gene 5113	protein-coding
common_peak2-28817-20-13-0.680719862533589-0.809260849721102	chr5	65457497	65458008	+	0	NA	Intergenic	Intergenic	-64718	NM_175174	71778	Mm.10281	NM_175174	ENSMUSG00000054920	Klhl5	1300013C10Rik	kelch-like 5	protein-coding
common_peak1-16439-11-2-1.92373108353046-2.32232533660526	chr5	134955092	134955639	+	0	NA	Intergenic	ETnERV2-int|LTR|ERVK	-22779	NM_001081464	57080	Mm.332735	NM_020331	ENSMUSG00000023079	Gtf2ird1	1700012P16Rik|BEN|Cream1|ESTM9|GTF3|Gtf2il|MusTRD1|Tg(Alb1-Myc)166.8Sst|WBSCR11|X83320	general transcription factor II I repeat domain-containing 1	protein-coding
common_peak1-9608-98-136-0.103736610470024-0.393897261527946	chr11	120580870	120582309	+	0	NA	exon (NM_153545, exon 17 of 18)	exon (NM_153545, exon 17 of 18)	-1193	NM_133223	170758	Mm.34008	NM_133223	ENSMUSG00000018012	Rac3	Rac1B	RAS-related C3 botulinum substrate 3	protein-coding
common_peak1-8723-41-50-0.028723362877165-0.309546119484978	chr11	109362618	109363839	+	0	NA	intron (NM_028710, intron 4 of 13)	RSINE1|SINE|B4	-28318	NM_001029842	104681	Mm.265874	NM_134038	ENSMUSG00000041920	Slc16a6	AW743111|ESTM12|MCT 6|MCT 7|MCT6	solute carrier family 16 (monocarboxylic acid transporters), member 6	protein-coding
unique_peak2-36045-2-6--1.72480917832092-1.26211192963361	chr19	45015130	45015457	+	0	NA	intron (NM_001081225, intron 4 of 19)	L1_Mus2|LINE|L1	9684	NM_001081225	226151	Mm.212609	NM_172638	ENSMUSG00000036097	Fam178a	3632432H19|6030443O07Rik|AU014917	family with sequence similarity 178, member A	protein-coding
common_peak1-10742-45-81--0.497193979273212-1.13125231345915	chr14	67071786	67072811	+	0	NA	Intergenic	Intergenic	109086	NM_019675	56471	Mm.35474	NM_019675	ENSMUSG00000022044	Stmn4	Lagl|R75359|RB3	stathmin-like 4	protein-coding
unique_peak1-5465-11-5-0.923731083530457-1.477227296591	chr5	123672249	123672972	+	0	NA	Intergenic	B4A|SINE|B4	-5589	NM_026000	67151	Mm.278997	NM_026000	ENSMUSG00000029440	Psmd9	1500011J20Rik|2610202L11Rik|Bridge-1|P27	proteasome (prosome, macropain) 26S subunit, non-ATPase, 9	protein-coding
unique_peak2-35485-4-8--1.19338551529556-1.21878474469819	chr17	45685700	45686128	+	0	NA	intron (NM_001013749, intron 1 of 2)	intron (NM_001013749, intron 1 of 2)	712	NM_001013749	210573	Mm.329064	NM_001013749	ENSMUSG00000096847	Tmem151b	Gm323	transmembrane protein 151B	protein-coding
unique_peak1-6940-8-8--0.164702583494742-1.00793137938329	chr8	110079403	110079918	+	0	NA	intron (NM_025830, intron 21 of 23)	intron (NM_025830, intron 21 of 23)	4516	NR_029553	387158		NR_029553		Mir140	Mirn140|mmu-mir-140	microRNA 140	ncRNA
common_peak1-7897-17-15-0.218296338205038-0.403453972741633	chr1	135466060	135467093	+	0	NA	Intergenic	B1_Mur2|SINE|Alu	40281	NM_009227	20643	Mm.249110	NM_009227	ENSMUSG00000090553	Snrpe	AL022645|C76690|SME	small nuclear ribonucleoprotein E	protein-coding
common_peak2-28257-47-65--0.109552694591906-0.328608881955056	chr4	126202121	126203637	+	0	NA	intron (NM_153177, intron 2 of 17)	intron (NM_153177, intron 2 of 17)	7823	NM_153177	76850	Mm.86705	NM_153177	ENSMUSG00000042500	Ago4	5730550L01Rik|AI481660|Eif2c4	argonaute RISC catalytic subunit 4	protein-coding
common_peak1-18133-24-14-0.886319307159198-1.33403699391683	chr8	10647158	10648238	+	0	NA	Intergenic	GA-rich|Low_complexity|Low_complexity	234756	NR_040705	320014	Mm.403203	NR_040705		B930025P03Rik	-	RIKEN cDNA B930025P03 gene	ncRNA
unique_peak1-2520-17-8-1.04837133676273-1.30305656033811	chr16	20372745	20373516	+	0	NA	intron (NM_013790, intron 16 of 29)	intron (NM_013790, intron 16 of 29)	-47653	NM_183158	224044	Mm.276400	NM_183158	ENSMUSG00000022818	Cyp2ab1	EG224044|F730023N20	cytochrome P450, family 2, subfamily ab, polypeptide 1	protein-coding
unique_peak1-3013-15-2-2.4272022498345-3.53487848679804	chr17	86731883	86732621	+	0	NA	intron (NM_011104, intron 1 of 14)	intron (NM_011104, intron 1 of 14)	-45734	NR_045435	72104	Mm.443401	NR_045435		2010106C02Rik	-	RIKEN cDNA 2010106C02 gene	ncRNA
common_peak1-18094-11-14--0.398197011356905-0.379391706698377	chr8	109608522	109609095	+	0	NA	intron (NR_104410, intron 3 of 10)	intron (NR_104410, intron 3 of 10)	11198	NR_106043	102465652		NR_106043		Mir7075	mmu-mir-7075	microRNA mir-7075	ncRNA
common_peak1-16949-21-12-0.869049547125143-1.18646456559501	chr6	84265582	84266379	+	0	NA	Intergenic	Intergenic	107852	NR_046063	100038556	Mm.387783	NR_046063		Gm10445	ENSMUSG00000072956	predicted gene 10445	ncRNA
unique_peak2-39776-3-11--1.99894559068043-1.95434855131066	chrX	7883800	7884459	+	0	NA	Intergenic	Lx2|LINE|L1	-20421	NM_199064	385312	Mm.484393	NM_199064	ENSMUSG00000068219	Ssxb10	-	synovial sarcoma, X member B, breakpoint 10	protein-coding
unique_peak2-38764-1-6--2.43441193227435-1.56314192529759	chr7	122158566	122158940	+	0	NA	Intergenic	Intergenic	63965	NR_040319	101786	Mm.395157	NR_040317		A730082K24Rik	AU044236	RIKEN cDNA A730082K24 gene	ncRNA
unique_peak2-38588-5-4--0.0263084308932156-0.909929411522249	chr7	70361917	70362247	+	0	NA	Intergenic	Intergenic	-4670	NM_007390	11441	Mm.113464	NM_007390	ENSMUSG00000030525	Chrna7	Acra7|alpha7	cholinergic receptor, nicotinic, alpha polypeptide 7	protein-coding
unique_peak1-4540-21-8-1.39956426382392-2.11898024768848	chr3	37752386	37753387	+	0	NA	Intergenic	L1_Mur2|LINE|L1	-44849	NR_040559	626410	Mm.389417	NR_040559		Gm20755	-	predicted gene, 20755	ncRNA
common_peak2-25786-56-83--0.156721597339518-0.389025993365906	chr19	34878074	34880064	+	0	NA	Intergenic	Intergenic	16194	NR_029783	723826		NR_029783		Mir107	Mirn107|mmu-mir-107	microRNA 107	ncRNA
unique_peak1-2437-8-1-2.00522241794757-2.05605744720049	chr15	101484070	101484591	+	0	NA	intron (NM_016879, intron 1 of 3)	RLTR11A2|LTR|ERVK	-6519	NR_003960	432987	Mm.450174	NM_001004170	ENSMUSG00000095241	Gm5478	EG432987	predicted pseudogene 5478	pseudo
common_peak2-31767-22-20-0.254966682308644-0.421916810733237	chr9	21616244	21617076	+	0	NA	intron (NM_177030, intron 38 of 49)	B1_Mur2|SINE|Alu	-2216	NR_106051	102465657		NR_106051		Mir7083	mmu-mir-7083	microRNA mir-7083	ncRNA
unique_peak1-6618-8-3-1.00522241794757-1.39487600375387	chr8	4483445	4483941	+	0	NA	Intergenic	Intergenic	-9712	NM_026058	67260	Mm.35511	NM_026058	ENSMUSG00000008206	Cers4	2900019C14Rik|Lass4|Trh1	ceramide synthase 4	protein-coding
common_peak2-21314-12-15--0.351224014912361-0.332077462497413	chr11	74925668	74926398	+	0	NA	intron (NM_001002764, intron 13 of 18)	B1_Mus2|SINE|Alu	-46540	NR_030454	735274		NR_030454		Mir684-1	Mirn684-1	microRNA 684-1	ncRNA
common_peak2-30042-6-7--0.434601889619698-0.97990265578305	chr6	126848095	126848465	+	0	NA	intron (NM_207210, intron 4 of 14)	B2_Mm1t|SINE|B2	23577	NM_207210	101320	Mm.44896	NM_207210	ENSMUSG00000030345	Dyrk4	AW049118|Dyrk4a|Dyrk4b	dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 4	protein-coding
common_peak2-24512-9-9--0.132314688483142-1.03275496310833	chr17	26598107	26598703	+	0	NA	Intergenic	(GA)n|Simple_repeat|Simple_repeat	46495	NM_001081656	240055	Mm.133211	NM_001081656	ENSMUSG00000034413	Neurl1b	C230078M08Rik|EG240055	neuralized homolog 1b (Drosophila)	protein-coding
unique_peak2-35482-6-16--1.52206473087004-1.32521814697968	chr17	45506789	45507168	+	0	NA	Intergenic	Intergenic	63678	NM_152810	71702	Mm.28270	NM_152810	ENSMUSG00000023932	Cdc5l	1200002I02Rik|AA408004|PCDC5RP	cell division cycle 5-like (S. pombe)	protein-coding
unique_peak1-3262-22-4-2.32535601020004-3.9780981129625	chr18	67258238	67259334	+	0	NA	intron (NM_177137, intron 1 of 11)	MTD-int|LTR|MaLR	10834	NM_177137	14680	Mm.440746	NM_010307	ENSMUSG00000024524	Gnal	2610011C15Rik|9630020G10Rik|Galphaolf|Gna10|Golf	guanine nucleotide binding protein, alpha stimulating, olfactory type	protein-coding
common_peak1-15141-13-8-0.608547029195456-0.660903317613904	chr3	144760625	144761245	+	0	NA	intron (NM_178697, intron 1 of 13)	intron (NM_178697, intron 1 of 13)	1070	NM_178697	229933	Mm.331420	NM_178697	ENSMUSG00000036960	Clca5	4732440A06|AI586120|Clca2	chloride channel calcium activated 5	protein-coding
common_peak1-11189-20-28--0.369906210536379-0.457753417732779	chr15	77152308	77153463	+	0	NA	Intergenic	Intergenic	-15402	NM_053104	93686	Mm.202774	NM_053104	ENSMUSG00000033565	Rbfox2	Fbm2|Fxh|Hrnbp2|Rbm9	RNA binding protein, fox-1 homolog (C. elegans) 2	protein-coding
common_peak2-31724-37-47--0.0589694292353373-0.303364957229384	chr9	7872434	7873391	+	0	NA	5' UTR (NM_007464, exon 1 of 9)	5' UTR (NM_007464, exon 1 of 9)	258	NM_007464	11796	Mm.2026	NM_007464	ENSMUSG00000032000	Birc3	AW107670|Api1|Api2|Birc2|HIAP2|IAP1|IAP2|MIAP1|MIAP2|MIHB|MIHC|RNF49|cIAP-1|cIAP-2|cIAP1|cIAP2	baculoviral IAP repeat-containing 3	protein-coding
unique_peak2-37310-4-7--1.02346051385325-1.09384600808989	chr4	124802089	124802402	+	0	NA	intron (NM_153159, intron 2 of 5)	intron (NM_153159, intron 2 of 5)	2880	NM_153159	230738	Mm.402	NM_153159	ENSMUSG00000042677	Zc3h12a	BC036563|MCPIP|Mcpip1	zinc finger CCCH type containing 12A	protein-coding
common_peak2-28420-18-55--1.49443577082925-3.98923275154813	chr4	143161566	143162266	+	0	NA	exon (NM_001007579, exon 3 of 4)	exon (NM_001007579, exon 3 of 4)	4546	NM_001007579	329986	Mm.453523	NM_001007579	ENSMUSG00000070618	BC080695	-	cDNA sequence BC080695	protein-coding
common_peak1-18191-357-461-0.59961569177783-11.0614024596699	chr8	20422592	20425442	+	0	NA	Intergenic	Intergenic	-403625	NR_028428	381598	Mm.359054	NM_001024708	ENSMUSG00000071793	2610005L07Rik	2810038F24Rik|6720476A01Rik	cadherin 11 pseudogene	pseudo
unique_peak1-5473-9-3-1.18961340640422-1.57096726280955	chr5	126539819	126540310	+	0	NA	Intergenic	ORR1A2|LTR|MaLR	527276	NM_001190352	208151	Mm.40397	NM_001190352	ENSMUSG00000070498	Tmem132b	AK220418|mKIAA1786	transmembrane protein 132B	protein-coding
common_peak1-8515-87-175--0.463794512856128-1.89053688068053	chr10	84440568	84441943	+	0	NA	intron (NM_001013441, intron 6 of 8)	intron (NM_001013441, intron 6 of 8)	60897	NM_183172	237422	Mm.18936	NM_183172		Ric8b	BC051080|Ric-8|Ric-8b	resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)	protein-coding
common_peak2-30122-29-26-0.357402578451643-0.590428395010953	chr6	137520392	137521184	+	0	NA	intron (NM_001271588, intron 1 of 20)	B4|SINE|B4	-1258	NM_001271587	13860	Mm.235346	NM_007945	ENSMUSG00000015766	Eps8	AW261790	epidermal growth factor receptor pathway substrate 8	protein-coding
unique_peak2-37536-1-6--2.43441193227435-1.56314192529759	chr5	27730502	27730870	+	0	NA	intron (NM_001136060, intron 3 of 25)	intron (NM_001136060, intron 3 of 25)	97246	NM_028561	73526	Mm.389608	NM_028561	ENSMUSG00000048703	Speer4b	1700081O22Rik|SPEER-4B	spermatogenesis associated glutamate (E)-rich protein 4b	protein-coding
unique_peak2-34721-6-5--0.0195643903408542-0.947717972411649	chr15	36796960	36797341	+	0	NA	Intergenic	Intergenic	-70466	NM_001253806	22631	Mm.3360	NM_011740	ENSMUSG00000022285	Ywhaz	1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	protein-coding
common_peak1-8560-15-13-0.204809828498052-0.368541233333383	chr10	94198724	94199639	+	0	NA	intron (NM_029852, intron 5 of 15)	intron (NM_029852, intron 5 of 15)	47646	NM_029852	77048	Mm.296971	NM_029852	ENSMUSG00000020024	Cep83	2600001G24Rik|4921537D05Rik|5730513H21Rik|Ccdc41	centrosomal protein 83	protein-coding
common_peak2-27337-11-22--1.0148683718054-1.11267835143409	chr3	69252554	69253193	+	0	NA	intron (NM_178726, intron 1 of 3)	intron (NM_178726, intron 1 of 3)	132033	NM_178726	242083	Mm.40577	NM_178726		Ppm1l	3222401G13|5930404J21Rik|AI481720|AW045850|PP2C|PP2Cepsilon|Pp2ce|Ppp2ce|mKIAA4175	protein phosphatase 1 (formerly 2C)-like	protein-coding
common_peak1-14011-58-80--0.0439000679941275-0.302395710585543	chr2	109677017	109678138	+	0	NA	Intergenic	Intergenic	-53458	NM_011699	22343	Mm.235300	NM_011699	ENSMUSG00000027162	Lin7c	9130007B12Rik|AI303698|AU019331|AW125731|D2Ertd520e|LIN-7-C|LIN-7C|MALS-3|Veli3	lin-7 homolog C (C. elegans)	protein-coding
common_peak1-9829-24-15-0.793209902767717-1.16796998271032	chr12	73779349	73780558	+	0	NA	Intergenic	Intergenic	-14138	NM_025522	66375	Mm.289653	NM_025522	ENSMUSG00000021094	Dhrs7	2310016E22Rik|5730564L20Rik|AW061210|Retdsr4|Retsdr4	dehydrogenase/reductase (SDR family) member 7	protein-coding
unique_peak1-4589-10-5-0.771452844287613-1.33892459842472	chr3	58327472	58328114	+	0	NA	intron (NM_030685, intron 2 of 2)	intron (NM_030685, intron 2 of 2)	-1950	NM_001005509	229317	Mm.21617	NM_001005509	ENSMUSG00000027810	Eif2a	D030048D22|D3Ertd194e	eukaryotic translation initiation factor 2A	protein-coding
common_peak2-29097-35-49--0.21248593131222-0.386060992278541	chr5	122501343	122502242	+	0	NA	Intergenic	Intergenic	-3958	NM_007804	13048	Mm.156172	NM_007804	ENSMUSG00000042589	Cux2	1700051K22Rik|Cutl2|Cux-2|ENSMUSG00000072641	cut-like homeobox 2	protein-coding
common_peak2-29609-6-7--0.434601889619698-0.97990265578305	chr6	53615329	53615693	+	0	NA	intron (NM_172728, intron 3 of 6)	B1F|SINE|Alu	92143	NM_172728	231991	Mm.321138	NM_172728	ENSMUSG00000053007	Creb5	Crebpa|D430026C09Rik	cAMP responsive element binding protein 5	protein-coding
common_peak2-28183-12-15--0.351224014912361-0.332077462497413	chr4	115102990	115103747	+	0	NA	intron (NM_172306, intron 4 of 11)	L1Md_T|LINE|L1	19139	NM_172306	13118	Mm.448292	NM_172306	ENSMUSG00000078597	Cyp4a12b	BC060945|Cyp4a12	cytochrome P450, family 4, subfamily a, polypeptide 12B	protein-coding
common_peak1-11783-13-7-0.778472030637769-0.817533494790411	chr16	45946090	45946605	+	0	NA	Intergenic	Lx8|LINE|L1	64179	NM_001134480	433022	Mm.380993	NM_001134480	ENSMUSG00000087141	Plcxd2	AW494639|EG433022	phosphatidylinositol-specific phospholipase C, X domain containing 2	protein-coding
unique_peak1-1849-8-2-1.42025991722641-1.65811743852845	chr14	47911820	47912207	+	0	NA	TTS (NM_080843)	TTS (NM_080843)	-5976	NM_178684	218975	Mm.212297	NM_178684	ENSMUSG00000021840	Mapk1ip1l	9130202B12|C130032J12Rik	mitogen-activated protein kinase 1 interacting protein 1-like	protein-coding
common_peak1-18899-12-18--0.599151528355947-0.476916024233333	chr9	37347694	37348361	+	0	NA	exon (NM_020518, exon 3 of 7)	exon (NM_020518, exon 3 of 7)	1187	NM_020518	57276	Mm.27478	NM_020518	ENSMUSG00000001943	Vsig2	1190004B15Rik|2210413P10Rik|AU040484|CTX|Ctm	V-set and immunoglobulin domain containing 2	protein-coding
common_peak1-17459-16-12-0.417823924126969-0.489164546851866	chr7	19270800	19271488	+	0	NA	intron (NM_054058, intron 1 of 5)	intron (NM_054058, intron 1 of 5)	197	NM_054058	434540	Mm.479863	NM_054058		Psg20	Cea7|EG434540	pregnancy-specific glycoprotein 20	protein-coding
unique_peak2-38228-5-6--0.511735258063458-0.947717972411649	chr6	115537924	115538341	+	0	NA	intron (NM_001101431, intron 2 of 3)	HAL1-2a_MD|LINE|L1	4462	NM_001101431	70291	Mm.133694	NM_001101431		Mkrn2os	2510049J12Rik	makorin, ring finger protein 2, opposite strand	protein-coding
common_peak2-24354-10-7-0.356415345008769-1.12966497611638	chr17	6116904	6117330	+	0	NA	intron (NM_001103181, intron 1 of 13)	URR1B|DNA|MER1_type	10287	NM_001103181	68842	Mm.449307	NM_054040	ENSMUSG00000034377	Tulp4	1110057P05Rik|2210038L17Rik|Tusp	tubby like protein 4	protein-coding
common_peak1-12324-47-54-0.153481711241888-0.393610822453554	chr17	47957528	47959169	+	0	NA	intron (NM_001276390, intron 2 of 3)	intron (NM_001276390, intron 2 of 3)	11892	NM_001276391	17240	Mm.329100	NM_010783	ENSMUSG00000032717	Mdfi	I-mf|I-mfa	MyoD family inhibitor	protein-coding
unique_peak1-4782-12-5-1.06381348436648-1.78669045979184	chr3	130061618	130062177	+	0	NA	intron (NM_029838, intron 2 of 37)	intron (NM_029838, intron 2 of 37)	178134	NM_001244952	77018	Mm.91728	NM_029838	ENSMUSG00000058897	Col25a1	2700062B08Rik|CLAC-P	collagen, type XXV, alpha 1	protein-coding
common_peak2-31838-16-13-0.310908720210457-0.417187467413082	chr9	45060166	45060656	+	0	NA	Intergenic	Intergenic	14379	NR_106054	102466803		NR_106054		Mir7086	mmu-mir-7086	microRNA mir-7086	ncRNA
unique_peak2-35677-4-7--1.02346051385325-1.09384600808989	chr18	12643916	12644293	+	0	NA	intron (NM_010680, intron 32 of 74)	intron (NM_010680, intron 32 of 74)	151571	NM_010680	16774	Mm.42012	NM_010680	ENSMUSG00000024421	Lama3	Lama3B|[a]3B	laminin, alpha 3	protein-coding
unique_peak1-6072-20-1-3.48807478459119-5.43827864561946	chr6	120111955	120112652	+	0	NA	intron (NM_016718, intron 1 of 3)	B1F|SINE|Alu	68905	NM_016718	29862	Mm.103668	NM_016718	ENSMUSG00000041377	Ninj2	-	ninjurin 2	protein-coding
common_peak2-29826-26-14-1.02100849654994-1.59386218057211	chr6	91737926	91738702	+	0	NA	intron (NM_001159507, intron 2 of 23)	intron (NM_001159507, intron 2 of 23)	19073	NM_001159507	243547	Mm.333264	NM_001033353	ENSMUSG00000030098	Grip2	-	glutamate receptor interacting protein 2	protein-coding
common_peak1-9875-49-46-0.451694971347546-0.943512743618327	chr12	83987428	83988797	+	0	NA	intron (NM_001282061, intron 2 of 16)	Lx|LINE|L1	52030	NR_046045	74283	Mm.398247	NR_046045		1700085C21Rik	-	RIKEN cDNA 1700085C21 gene	ncRNA
unique_peak2-38304-1-6--2.43441193227435-1.56314192529759	chr6	137505962	137506392	+	0	NA	intron (NM_001271588, intron 1 of 20)	intron (NM_001271588, intron 1 of 20)	13353	NM_001271595	13860	Mm.235346	NM_007945	ENSMUSG00000015766	Eps8	AW261790	epidermal growth factor receptor pathway substrate 8	protein-coding
common_peak1-11490-23-11-1.13680500378792-1.66030262873422	chr15	102395382	102396016	+	0	NA	intron (NM_146065, intron 2 of 10)	B1_Mur1|SINE|Alu	-40326	NR_033409	54615	Mm.445915	NM_018787	ENSMUSG00000023052	Npff	-	neuropeptide FF-amide peptide precursor	protein-coding
common_peak2-23361-64-95--0.119516099012553-0.359187433159323	chr15	44619174	44620298	+	0	NA	promoter-TSS (NM_001032727)	promoter-TSS (NM_001032727)	-127	NM_001032727	319613	Mm.207715	NM_176998	ENSMUSG00000022340	Sybu	Golsyn	syntabulin (syntaxin-interacting)	protein-coding
common_peak2-24833-20-36--0.721378581037757-1.04213512323541	chr17	72959050	72959749	+	0	NA	Intergenic	Intergenic	-5752	NM_007439	11682	Mm.311854	NM_007439	ENSMUSG00000055471	Alk	CD246|Tcrz	anaplastic lymphoma kinase	protein-coding
common_peak2-23176-29-29-0.205399485006592-0.423354874519384	chr15	36716165	36716847	+	0	NA	intron (NM_001253807, intron 1 of 4)	PB1D9|SINE|Alu	4181	NM_001253807	22631	Mm.3360	NM_011740	ENSMUSG00000022285	Ywhaz	1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	protein-coding
common_peak1-10292-33-37-0.0834100490819436-0.326417267106726	chr13	63239764	63240979	+	0	NA	intron (NM_001289926, intron 5 of 15)	MIRc|SINE|MIR	-100967	NR_110520	72061	Mm.188105	NM_028079	ENSMUSG00000021458	2010111I01Rik	2300006M17Rik|AP-O|Aopep	RIKEN cDNA 2010111I01 gene	protein-coding
common_peak1-10415-8-38--2.28017980091468-4.91804610622903	chr13	98534853	98535377	+	0	NA	Intergenic	Intergenic	205160	NR_046157	328314	Mm.138047	NR_046157		Gm5086	B230311A21|EG328314	predicted gene 5086	ncRNA
common_peak2-31290-32-35-0.109167017777348-0.348003640999429	chr8	72547225	72548277	+	0	NA	intron (NM_028993, intron 12 of 18)	intron (NM_028993, intron 12 of 18)	18882	NM_001167939	74549	Mm.269061	NM_028993	ENSMUSG00000031858	Mau2	9130404D08Rik|A930019L04Rik|C77863|C79014|Mau-2|mKIAA0892	MAU2 chromatid cohesion factor homolog (C. elegans)	protein-coding
common_peak1-16360-8-11--0.579740082773585-1.14218153353838	chr5	122354509	122355062	+	0	NA	intron (NM_007804, intron 4 of 22)	intron (NM_007804, intron 4 of 22)	55748	NM_175474	231717	Mm.12654	NM_175474	ENSMUSG00000044134	Fam109a	A230106M15Rik|AU017694|IPIP27A|Ses1	family with sequence similarity 109, member A	protein-coding
unique_peak1-4659-7-3-0.799090830298189-1.23214870625617	chr3	90567905	90568352	+	0	NA	Intergenic	L1Md_T|LINE|L1	37300	NM_207263	384997	Mm.316644	NM_207263	ENSMUSG00000042250	Pglyrp4	Gm1478|Gm413	peptidoglycan recognition protein 4	protein-coding
common_peak1-12777-21-13-0.762134343208631-1.0220094258199	chr18	61626011	61626876	+	0	NA	Intergenic	Intergenic	17818	NR_045419	442846	Mm.417648	NR_045419		A530050N04Rik	-	RIKEN cDNA A530050N04 gene	ncRNA
unique_peak2-33426-8-18--1.24270509549601-1.15812782348128	chr11	60301870	60302562	+	0	NA	intron (NM_010862, intron 10 of 64)	intron (NM_010862, intron 10 of 64)	19375	NM_001103171	17910	Mm.89960	NM_010862	ENSMUSG00000042678	Myo15	Myo15a|sh-2|sh2	myosin XV	protein-coding
common_peak2-22573-21-9-1.24756117037887-1.83731222263754	chr13	64422161	64422602	+	0	NA	Intergenic	Intergenic	-8363	NM_025370	66129	Mm.491110	NM_025370	ENSMUSG00000021482	Aaed1	1110018J18Rik|AI849003	AhpC/TSA antioxidant enzyme domain containing 1	protein-coding
unique_peak1-4305-13-6-0.971117108580164-1.01572999746118	chr2	147928021	147928798	+	0	NA	Intergenic	Intergenic	-55704	NM_010446	15376	Mm.938	NM_010446	ENSMUSG00000037025	Foxa2	HNF3-beta|HNF3beta|Hnf-3b|Hnf3b|Tcf-3b|Tcf3b	forkhead box A2	protein-coding
common_peak2-28558-8-8--0.164702583494742-1.00793137938329	chr5	5359573	5360111	+	0	NA	intron (NM_011074, intron 2 of 14)	intron (NM_011074, intron 2 of 14)	20409	NM_011074	18647	Mm.389061	NM_011074	ENSMUSG00000028926	Cdk14	Pftk1|mKIAA0834	cyclin-dependent kinase 14	protein-coding
unique_peak2-33741-1-10--3.08648862885404-2.57096726280955	chr11	116524046	116524498	+	0	NA	intron (NM_001163318, intron 4 of 4)	intron (NM_001163318, intron 4 of 4)	5850	NM_001163318	100038570	Mm.390349	NM_001163318	ENSMUSG00000075410	Gm11744	OTTMUSG00000003947|Prcd	predicted gene 11744	protein-coding
common_peak2-22083-36-39-0.157392991280392-0.394172396164276	chr12	78748906	78749607	+	0	NA	Intergenic	Intergenic	238128	NM_001252616	53618	Mm.35628	NM_016893	ENSMUSG00000021065	Fut8	-	fucosyltransferase 8	protein-coding
unique_peak2-39218-2-8--2.08737925770563-1.65811743852845	chr8	108709150	108709692	+	0	NA	intron (NM_178798, intron 2 of 9)	ID4_|SINE|ID	16646	NM_178798	330836	Mm.46749	NM_178798	ENSMUSG00000031904	Slc7a6	AI643885|LAT-2|LAT3	solute carrier family 7 (cationic amino acid transporter, y+ system), member 6	protein-coding
unique_peak1-2300-6-2-0.980435609659146-1.26211192963361	chr15	81056378	81056836	+	0	NA	Intergenic	PB1D9|SINE|Alu	-9322	NM_145132	207911	Mm.323523	NM_145132	ENSMUSG00000050164	Mchr1	AW049955|Gpr24|Mch1r	melanin-concentrating hormone receptor 1	protein-coding
common_peak1-12080-10-26--1.3984721571547-1.90052685918624	chr17	24527348	24528017	+	0	NA	intron (NM_001039581, intron 17 of 31)	MTC-int|LTR|MaLR	23776	NR_033554	654822	Mm.489806	NM_001039561	ENSMUSG00000073437	D330041H03Rik	-	RIKEN cDNA D330041H03 gene	ncRNA
common_peak1-17954-23-44--0.770085591820594-1.3174917037782	chr7	128460841	128461934	+	0	NA	Intergenic	Intergenic	-74423	NM_001081327	195646	Mm.247449	NM_177575	ENSMUSG00000046321	Hs3st2	6430516N12Rik|A830061E14Rik|AW491345	heparan sulfate (glucosamine) 3-O-sulfotransferase 2	protein-coding
common_peak2-20657-54-89--0.318767334699941-0.691543590885677	chr10	82629160	82630603	+	0	NA	intron (NM_021439, intron 2 of 2)	intron (NM_021439, intron 2 of 2)	170681	NM_177388	338365	Mm.67073	NM_177388	ENSMUSG00000034591	Slc41a2	A230035L05Rik|SLC41A1-L1	solute carrier family 41, member 2	protein-coding
common_peak2-20457-13-6-0.971117108580164-1.01572999746118	chr10	42089724	42090098	+	0	NA	intron (NM_145743, intron 7 of 12)	L1_Rod|LINE|L1	-93363	NM_019740	56484	Mm.338613	NM_019740	ENSMUSG00000048756	Foxo3	1110048B16Rik|2010203A17Rik|C76856|FKHRL1|Fkhr2|Foxo3a	forkhead box O3	protein-coding
common_peak2-24560-63-103--0.262127127070502-0.593954113235467	chr17	28800693	28801839	+	0	NA	intron (NM_001290320, intron 5 of 19)	B1_Mus1|SINE|Alu	25666	NM_001290320	224661		NM_146076	ENSMUSG00000036196	Slc26a8	-	solute carrier family 26, member 8	protein-coding
common_peak1-12670-19-17-0.232762325219374-0.392630012299441	chr18	36707691	36708471	+	0	NA	intron (NM_001271547, intron 19 of 19)	B2_Mm1t|SINE|B2	-12176	NM_175375	108857	Mm.482287	NM_175375	ENSMUSG00000024483	Ankhd1	1110004O12Rik|4933432B13Rik|9130019P20Rik|A530027J04Rik|A630021B20Rik|AA571404|Mask|mFLJ00246|mKIAA1085	ankyrin repeat and KH domain containing 1	protein-coding
common_peak2-22440-72-59-0.761693217263799-2.8253794630392	chr13	40867911	40869720	+	0	NA	Intergenic	Intergenic	-39623	NM_011547	21418	Mm.85544	NM_011547	ENSMUSG00000021359	Tfap2a	AP-2|AP2alpha|Ap2|Ap2tf|Tcfap2a	transcription factor AP-2, alpha	protein-coding
unique_peak1-2726-7-4-0.477162735410827-1.09384600808989	chr16	93711934	93712388	+	0	NA	promoter-TSS (NM_027293)	promoter-TSS (NM_027293)	9	NM_027293	70028	Mm.23230	NM_026700	ENSMUSG00000022946	Dopey2	0610038M01Rik|2610510B01Rik|AI503246|C21orf5|mKIAA0933	dopey family member 2	protein-coding
unique_peak2-38432-9-14--0.717277189204299-0.53895475198017	chr7	25781575	25782168	+	0	NA	intron (NM_001290469, intron 8 of 22)	B1_Mur4|SINE|Alu	9085	NM_001290469	232975	Mm.44101	NM_144921	ENSMUSG00000040907	Atp1a3	Atpa-2	ATPase, Na+/K+ transporting, alpha 3 polypeptide	protein-coding
common_peak2-30090-26-43--0.531532526478835-0.806432121853421	chr6	134897889	134898918	+	0	NA	intron (NR_037956, intron 1 of 1)	intron (NR_037956, intron 1 of 1)	19293	NR_037955	381822	Mm.5935	NR_037955	ENSMUSG00000098318	1190002F15Rik	AI120476	RIKEN cDNA 1190002F15 gene	ncRNA
unique_peak1-5733-10-3-1.35641534500877-1.75805390616669	chr6	43442553	43443125	+	0	NA	intron (NM_013861, intron 5 of 8)	intron (NM_013861, intron 5 of 8)	50411	NR_045988	319812	Mm.446393	NR_045988		9430018G01Rik	-	RIKEN cDNA 9430018G01 gene	ncRNA
unique_peak2-34144-1-9--2.94898510510411-2.31132995230379	chr13	23745063	23745461	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	30566	NM_178189	319164	Mm.261973	NM_178189	ENSMUSG00000069270	Hist1h2ac	-	histone cluster 1, H2ac	protein-coding
unique_peak2-34220-4-5--0.608423014574403-0.909929411522249	chr13	49317321	49317688	+	0	NA	Intergenic	Intergenic	-6109	NM_026738	68480	Mm.3336	NM_026738	ENSMUSG00000037960	1110007C09Rik	AI851695|Bincard	RIKEN cDNA 1110007C09 gene	protein-coding
unique_peak2-36725-2-6--1.72480917832092-1.26211192963361	chr3	55118802	55119114	+	0	NA	intron (NM_001111053, intron 3 of 6)	intron (NM_001111053, intron 3 of 6)	72510	NM_001195538	13175	Mm.393242	NM_019978	ENSMUSG00000027797	Dclk1	1700113D08Rik|2810480F11Rik|AI836758|Click-I|Cpg16|Dcamkl1|Dcl|Dclk|mKIAA0369	doublecortin-like kinase 1	protein-coding
unique_peak2-39137-9-8-0.0196884049619079-1.03275496310833	chr8	84989959	84990410	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-63699	NM_008357	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak1-16579-15-29--0.894725845052863-1.1282783422172	chr5	147077384	147078248	+	0	NA	intron (NM_153599, intron 2 of 12)	B1_Mus2|SINE|Alu	34565	NM_153599	264064	Mm.260576	NM_153599	ENSMUSG00000029635	Cdk8	-	cyclin-dependent kinase 8	protein-coding
unique_peak1-853-11-1-2.50869358425161-2.83420869758413	chr11	20346063	20346543	+	0	NA	Intergenic	Intergenic	-96953	NM_021372	58172	Mm.339676	NM_021372	ENSMUSG00000049800	Sertad2	AB041541|AU021878|Kiaa0127|SEI-2|Sei2|TRIP-Br2|mKIAA0127	SERTA domain containing 2	protein-coding
unique_peak1-3947-20-6-1.68071986253359-2.41165147706372	chr2	29634603	29635755	+	0	NA	intron (NM_001290495, intron 5 of 6)	intron (NM_001290495, intron 5 of 6)	8012	NM_001290496	227682	Mm.245739	NM_145520		Trub2	G430055L02Rik	TruB pseudouridine (psi) synthase homolog 2 (E. coli)	protein-coding
common_peak1-17922-8-7-0.00522241794757061-1.00793137938329	chr7	126649171	126649623	+	0	NA	intron (NM_027943, intron 3 of 11)	L1Md_T|LINE|L1	17599	NM_027943	71830	Mm.84631	NM_027943	ENSMUSG00000030968	Pdilt	1700007B13Rik	protein disulfide isomerase-like, testis expressed	protein-coding
common_peak2-22513-12-11-0.0638134843664826-0.337263207250336	chr13	54564852	54565332	+	0	NA	exon (NM_028597, exon 4 of 6)	exon (NM_028597, exon 4 of 6)	5109	NM_028597	73666	Mm.292487	NM_028597	ENSMUSG00000025872	Thoc3	2410044K02Rik|AL033344	THO complex 3	protein-coding
common_peak2-23924-17-10-0.75886471956774-0.917676348953458	chr16	10979804	10980225	+	0	NA	intron (NM_019980, intron 1 of 3)	intron (NM_019980, intron 1 of 3)	13200	NM_019980	56722	Mm.294753	NM_019980	ENSMUSG00000022500	Litaf	3222402J11Rik|C85531|N4WBP3|TBX1	LPS-induced TN factor	protein-coding
unique_peak2-39787-1-7--2.62705701021674-1.80617997398389	chrX	12005973	12006322	+	0	NA	Intergenic	RLTR20B3|LTR|ERVK	-74025	NR_045321	100043946	Mm.211985	NR_045321	ENSMUSG00000087591	Gm14635	OTTMUSG00000017536	predicted gene 14635	ncRNA
unique_peak2-33651-4-14--1.93035110946177-2.23384849113406	chr11	99088591	99089294	+	0	NA	intron (NM_020618, intron 3 of 10)	intron (NM_020618, intron 3 of 10)	3389	NM_020618	57376	Mm.379086	NM_020618	ENSMUSG00000037935	Smarce1	2810417B20Rik|5830412H02Rik|9030408N19Rik|Baf27	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	protein-coding
unique_peak1-7040-9-6-0.382258484346616-1.11707584880836	chr8	126932251	126932788	+	0	NA	intron (NM_171824, intron 1 of 6)	ID_B1|SINE|B4	25317	NM_171824	209966	Mm.234233	NM_171824	ENSMUSG00000050751	Pgbd5	2900019M05Rik|AI854313	piggyBac transposable element derived 5	protein-coding
common_peak1-8487-9-8-0.0196884049619079-1.03275496310833	chr10	80741540	80742136	+	0	NA	intron (NM_001282096, intron 11 of 20)	PB1D10|SINE|Alu	6688	NM_001282096	27375	Mm.27984	NM_013769	ENSMUSG00000034917	Tjp3	-	tight junction protein 3	protein-coding
common_peak2-25572-11-9-0.186765489364251-0.344532117358383	chr19	6969426	6969860	+	0	NA	Intergenic	Intergenic	14492	NM_012021	54683	Mm.279782	NM_012021		Prdx5	AOEB166|AOPP|Pmp20|Prdx6|PrxV	peroxiredoxin 5	protein-coding
unique_peak1-1962-9-2-1.60465090568306-1.87199725847353	chr14	105801313	105801784	+	0	NA	Intergenic	MTC|LTR|MaLR	-25228	NR_045859	71362	Mm.410781	NR_045859		5430440P10Rik	-	RIKEN cDNA 5430440P10 gene	ncRNA
common_peak1-13853-29-21-0.652858461977813-1.06916698217164	chr2	62645535	62646564	+	0	NA	intron (NM_133207, intron 6 of 15)	intron (NM_133207, intron 6 of 15)	143665	NM_145523	227960	Mm.219877	NM_145523	ENSMUSG00000026893	Gca	5133401E04Rik|AI573844	grancalcin	protein-coding
unique_peak2-35699-8-30--1.9489738924393-3.2467506969819	chr18	25547959	25548962	+	0	NA	intron (NM_001033532, intron 8 of 10)	RLTR25A|LTR|ERVK	220939	NM_001033532	225289	Mm.391081	NM_001033532	ENSMUSG00000033632	AW554918	4921538P22|AI461742|Kiaa1328|mKIAA1328	expressed sequence AW554918	protein-coding
common_peak2-25614-25-19-0.539921810457743-0.756750750680359	chr19	8981856	8982783	+	0	NA	intron (NM_001293621, intron 5 of 23)	intron (NM_001293621, intron 5 of 23)	9772	NM_008060	14376	Mm.3196	NM_008060	ENSMUSG00000071650	Ganab	AU042638|G2an|GluII|mKIAA0088	alpha glucosidase 2 alpha neutral subunit	protein-coding
unique_peak1-5561-10-6-0.549060422951165-1.21398586181642	chr5	146824641	146825204	+	0	NA	Intergenic	ORR1B1|LTR|MaLR	-3728	NR_030782	56388	Mm.301900	NM_019792	ENSMUSG00000029630	Cyp3a25	AI327008	cytochrome P450, family 3, subfamily a, polypeptide 25	protein-coding
unique_peak1-5877-10-3-1.35641534500877-1.75805390616669	chr6	86477330	86477840	+	0	NA	intron (NR_037961, intron 1 of 4)	intron (NR_037961, intron 1 of 4)	190	NR_037961	72012	Mm.349174	NR_037960	ENSMUSG00000097048	1600020E01Rik	-	RIKEN cDNA 1600020E01 gene	ncRNA
common_peak2-30506-12-13--0.158578936969966-0.301029995663979	chr7	65429979	65430547	+	0	NA	Intergenic	L1Md_T|LINE|L1	-483309	NM_009728	11982	Mm.135129	NM_009728	ENSMUSG00000025324	Atp10a	Atp10c|pfatp	ATPase, class V, type 10A	protein-coding
common_peak2-25617-16-14-0.211373046659543-0.364171515310935	chr19	8991638	8992358	+	0	NA	TTS (NM_001293621)	TTS (NM_001293621)	-2885	NM_024256	72727	Mm.259	NM_024256	ENSMUSG00000071649	B3gat3	2810405M13Rik	beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)	protein-coding
common_peak1-7793-10-8-0.186490343566457-1.078512453669	chr1	106171028	106171499	+	0	NA	Intergenic	L1Md_T|LINE|L1	-494133	NM_011800	23836	Mm.103640	NM_011800	ENSMUSG00000050840	Cdh20	Cdh7	cadherin 20	protein-coding
unique_peak2-35843-3-4--0.73591118484664-0.864171920961574	chr18	70837524	70837900	+	0	NA	Intergenic	(CAGAGA)n|Simple_repeat|Simple_repeat	109766	NM_010773	17191	Mm.322	NM_010773	ENSMUSG00000024513	Mbd2	MBD2a	methyl-CpG binding domain protein 2	protein-coding
common_peak1-7917-12-7-0.648775985087639-0.697979855752659	chr1	138617332	138617846	+	0	NA	intron (NR_037986, intron 2 of 4)	MIR|SINE|MIR	24801	NR_037986	100503474	Mm.428276	NR_037986		Gm16880	-	predicted gene, 16880	ncRNA
common_peak1-10068-45-45-0.336796069287859-0.658272150962117	chr13	21974123	21975254	+	0	NA	Intergenic	Intergenic	14230	NR_035500	100316716		NR_035500	miRBase:MI0009990	Mir1983	mmu-mir-1983	microRNA 1983	ncRNA
unique_peak2-33295-29-57--0.745690914512461-1.45455780655082	chr11	3123142	3124422	+	0	NA	intron (NM_001166547, intron 6 of 18)	intron (NM_001166547, intron 6 of 18)	20760	NM_001166549	74203	Mm.255649	NM_023743	ENSMUSG00000020454	Eif4enif1	2610509L04Rik|A930019J01Rik|AA410001|AU021239|Clast4|D11Ertd166e	eukaryotic translation initiation factor 4E nuclear import factor 1	protein-coding
common_peak1-12861-27-12-1.29110623275414-2.3494062982954	chr18	75446620	75447447	+	0	NA	TTS (NM_027727)	TTS (NM_027727)	9938	NR_045394	100503117	Mm.250517	NR_045393		2010010A06Rik	5033420E22Rik	RIKEN cDNA 2010010A06 gene	ncRNA
unique_peak1-5059-8-4-0.683294323060208-1.21878474469819	chr4	136148078	136148579	+	0	NA	intron (NM_133872, intron 2 of 18)	intron (NM_133872, intron 2 of 18)	10310	NM_133872	99982	Mm.28540	NM_133872	ENSMUSG00000036940	Kdm1a	1810043O07Rik|AA408884|Aof2|D4Ertd478e|Kdm1|Lsd1|mKIAA0601	lysine (K)-specific demethylase 1A	protein-coding
common_peak1-7560-13-8-0.608547029195456-0.660903317613904	chr1	40278529	40279306	+	0	NA	Intergenic	Intergenic	-3008	NM_008362	16177	Mm.896	NM_008362	ENSMUSG00000026072	Il1r1	CD121a|CD121b|IL-iR|Il1r-1	interleukin 1 receptor, type I	protein-coding
unique_peak2-35119-3-7--1.41398308995928-1.23214870625617	chr16	25433122	25433496	+	0	NA	Intergenic	RLTR20B2|LTR|ERVK	146406	NM_175165	71338	Mm.126851	NM_175165	ENSMUSG00000048399	Tprg	5430420C16Rik|Tprg1	transformation related protein 63 regulated	protein-coding
common_peak1-10575-11-11--0.0762689164695427-0.301029995663976	chr14	25734782	25735369	+	0	NA	Intergenic	Intergenic	227652	NR_045718	75862	Mm.109191	NR_045718		4930572O13Rik	-	RIKEN cDNA 4930572O13 gene	ncRNA
common_peak1-17125-8-14--0.901668177660948-0.660903317613906	chr6	115494000	115494521	+	0	NA	promoter-TSS (NM_199033)	promoter-TSS (NM_199033)	-462	NM_199033	381802	Mm.291208	NM_199033	ENSMUSG00000042389	Tsen2	AU067695	tRNA splicing endonuclease 2 homolog (S. cerevisiae)	protein-coding
common_peak2-30034-34-21-0.922636908363969-1.85054049304327	chr6	125434664	125435712	+	0	NA	intron (NM_007657, intron 1 of 7)	MIRm|SINE|MIR	9585	NM_007657	12527	Mm.210676	NM_007657	ENSMUSG00000030342	Cd9	Tspan29	CD9 antigen	protein-coding
common_peak2-27812-15-13-0.204809828498052-0.368541233333383	chr3	144760917	144761582	+	0	NA	intron (NM_178697, intron 1 of 13)	intron (NM_178697, intron 1 of 13)	756	NM_178697	229933	Mm.331420	NM_178697	ENSMUSG00000036960	Clca5	4732440A06|AI586120|Clca2	chloride channel calcium activated 5	protein-coding
unique_peak1-1930-8-1-2.00522241794757-2.05605744720049	chr14	76677458	76677978	+	0	NA	Intergenic	Intergenic	-137910	NM_207652	21807	Mm.153272	NM_009366	ENSMUSG00000022010	Tsc22d1	AA589566|AW105905|Egr5|TSC-22|Tgfb1i4|Tsc|Tsc22	TSC22 domain family, member 1	protein-coding
unique_peak1-5439-14-2-2.31425365963649-3.28500101358144	chr5	115774209	115774748	+	0	NA	Intergenic	Intergenic	-2708	NM_025573	108014	Mm.287826	NM_025573	ENSMUSG00000029538	Srsf9	25kDa|2610029M16Rik|SRp30c|Sfrs9	serine/arginine-rich splicing factor 9	protein-coding
unique_peak1-5203-10-2-1.77145284428761-2.09384600808989	chr5	35669199	35669879	+	0	NA	Intergenic	Intergenic	-34663	NR_046060	74429	Mm.399502	NR_046060		4930478P22Rik	4933405A14Rik	RIKEN cDNA 4930478P22 gene	ncRNA
common_peak2-19521-15-22--0.511397205501357-0.50761186003982	chr1	10993439	10994149	+	0	NA	intron (NM_029525, intron 1 of 39)	intron (NM_029525, intron 1 of 39)	10248	NM_029525	109294	Mm.123247	NM_029525	ENSMUSG00000048960	Prex2	6230420N16Rik|AI316880|AI553603|C030045D06Rik|D430013K02|Depdc2|P-Rex2	phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2	protein-coding
unique_peak2-32730-1-6--2.43441193227435-1.56314192529759	chr1	162293648	162294072	+	0	NA	intron (NM_013862, intron 18 of 20)	intron (NM_013862, intron 18 of 20)	-12158	NM_001038621	29809	Mm.25833	NM_013862	ENSMUSG00000026721	Rabgap1l	5830411O09Rik|8430421H08Rik|9630005B12Rik|AW049894|HHL|Hh1|mKIAA0471	RAB GTPase activating protein 1-like	protein-coding
unique_peak2-36233-8-7-0.00522241794757061-1.00793137938329	chr2	36049016	36049354	+	0	NA	Intergenic	Intergenic	-36761	NM_008969	19224	Mm.275434	NM_008969	ENSMUSG00000047250	Ptgs1	COX1|Cox-1|Cox-3|PGHS-1|PHS 1|Pghs1	prostaglandin-endoperoxide synthase 1	protein-coding
common_peak2-27088-33-33-0.24387472127519-0.447010559430123	chr3	94649372	94650680	+	0	NA	intron (NM_172683, intron 1 of 18)	B2_Mm2|SINE|B2	8537	NM_172683	229584	Mm.274787	NM_172683	ENSMUSG00000038902	Pogz	9530006B08Rik	pogo transposable element with ZNF domain	protein-coding
common_peak1-8878-19-11-0.81772482594053-0.991115276827166	chr11	43895472	43896255	+	0	NA	Intergenic	MTEb|LTR|MaLR	-181124	NM_001284381	11548	Mm.39086	NM_007416	ENSMUSG00000050541	Adra1b	[a]1b	adrenergic receptor, alpha 1b	protein-coding
common_peak2-22453-10-7-0.356415345008769-1.12966497611638	chr13	43212787	43213140	+	0	NA	intron (NM_001005740, intron 8 of 12)	RCHARR1|DNA|MER1_type	-5245	NM_001005748	218194	Mm.160124	NM_198419	ENSMUSG00000054728	Phactr1	9630030F18Rik|Rpel1	phosphatase and actin regulator 1	protein-coding
common_peak1-9975-39-49--0.0280949428555708-0.301029995663988	chr13	3537394	3538959	+	0	NA	intron (NM_008112, intron 1 of 10)	intron (NM_008112, intron 1 of 10)	855	NM_008112	14569	Mm.153226	NM_008112	ENSMUSG00000021218	Gdi2	GDI-B|GDIB|Gdi3	guanosine diphosphate (GDP) dissociation inhibitor 2	protein-coding
common_peak2-31478-26-59--0.978991503450056-2.39089534683746	chr8	106210177	106211544	+	0	NA	Intergenic	Intergenic	83161	NR_045730	71058	Mm.67707	NR_045730		4933400L20Rik	-	RIKEN cDNA 4933400L20 gene	ncRNA
unique_peak1-1334-8-1-2.00522241794757-2.05605744720049	chr12	8824965	8825347	+	0	NA	Intergenic	Intergenic	46954	NM_011519	20969	Mm.2580	NM_011519	ENSMUSG00000020592	Sdc1	AA408134|AA409076|CD138|Sstn|Synd|Synd1|syn-1	syndecan 1	protein-coding
common_peak2-26687-15-21--0.447266868081641-0.448200956659578	chr2	125782405	125783015	+	0	NA	intron (NM_001291002, intron 8 of 9)	Lx|LINE|L1	-77684	NM_008008	14178	Mm.330557	NM_008008	ENSMUSG00000027208	Fgf7	Kgf	fibroblast growth factor 7	protein-coding
common_peak2-26094-67-64-0.522043669754541-1.4709264371441	chr2	173260461	173262447	+	0	NA	Intergenic	L1MC3|LINE|L1	-86639	NM_028158	72221	Mm.46132	NM_028158	ENSMUSG00000027518	1700021F07Rik	-	RIKEN cDNA 1700021F07 gene	protein-coding
common_peak1-10935-31-13-1.41788374875552-2.90875693252979	chr15	11398750	11399848	+	0	NA	Intergenic	Intergenic	-69886	NM_033074	110960	Mm.286061	NM_033074	ENSMUSG00000022241	Tars	D15Wsu59e|ThrRS	threonyl-tRNA synthetase	protein-coding
unique_peak2-35447-5-12--1.40482005414695-1.62698961692433	chr17	35601428	35601948	+	0	NA	Intergenic	RMER17A|LTR|ERVK	-5346	NM_010391	15007	Mm.88795	NM_010391	ENSMUSG00000067235	H2-Q10	H-2Q10|Q10|Qa10	histocompatibility 2, Q region locus 10	protein-coding
unique_peak1-4433-21-5-1.98452676454508-3.24127775360835	chr2	168532549	168533431	+	0	NA	intron (NM_001289446, intron 2 of 27)	RSINE1|SINE|B4	26849	NM_001289445	11981	Mm.330819	NM_015731	ENSMUSG00000027546	Atp9a	IIa	ATPase, class II, type 9A	protein-coding
common_peak2-27529-18-25--0.38752056691274-0.421916810733234	chr3	95819441	95820403	+	0	NA	intron (NM_013841, intron 14 of 14)	intron (NM_013841, intron 14 of 14)	-20160	NM_023320	67220	Mm.458147	NM_023320	ENSMUSG00000015745	Plekho1	2810052M02Rik|CKIP-1|Ckip1|JZA-20|Jza2	pleckstrin homology domain containing, family O member 1	protein-coding
common_peak2-22885-3-6--1.22133801201688-1.08602067057793	chr14	31660048	31660416	+	0	NA	intron (NM_028839, intron 1 of 7)	intron (NM_028839, intron 1 of 7)	21452	NM_028839	69179	Mm.143025	NM_028839	ENSMUSG00000006526	Tmem110	1810038N08Rik|2310014H19Rik|AW554125	transmembrane protein 110	protein-coding
common_peak2-32266-12-27--1.15857893696997-1.38791538138627	chrX	12091487	12092355	+	0	NA	Intergenic	Intergenic	-72964	NM_027439	70495	Mm.25148	NM_027439	ENSMUSG00000031007	Atp6ap2	(P)RR|5730403E06Rik|APT6M8-9|ATP6M8-9|Atp6ip2|M8-9	ATPase, H+ transporting, lysosomal accessory protein 2	protein-coding
unique_peak1-7303-13-1-2.77847203063777-3.64038867156802	chr9	116334057	116334737	+	0	NA	Intergenic	Intergenic	-249916	NM_009371	21813	Mm.172346	NM_009371	ENSMUSG00000032440	Tgfbr2	1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII	transforming growth factor, beta receptor II	protein-coding
unique_peak2-34700-2-10--2.37688587490062-2.09384600808989	chr15	27849728	27850013	+	0	NA	intron (NM_001081302, intron 1 of 56)	intron (NM_001081302, intron 1 of 56)	105733	NM_001081302	223435	Mm.485422	NM_001081302	ENSMUSG00000022263	Trio	6720464I07Rik|AA408740|Solo	triple functional domain (PTPRF interacting)	protein-coding
common_peak2-28880-4-5--0.608423014574403-0.909929411522249	chr5	81022869	81023228	+	0	NA	Intergenic	Intergenic	-427570	NM_198702	319387	Mm.273631	NM_198702	ENSMUSG00000037605	Lphn3	5430402I23Rik|CIRL-3|D130075K09Rik|Gm1379|LEC3|mKIAA0768	latrophilin 3	protein-coding
unique_peak2-37349-2-5--1.50241675698448-1.08602067057793	chr4	133407286	133407709	+	0	NA	intron (NM_009097, intron 17 of 21)	intron (NM_009097, intron 17 of 21)	23149	NM_001285506	20111	Mm.301827	NM_009097	ENSMUSG00000003644	Rps6ka1	Mapkapk-1a|Rsk|Rsk-1|Rsk1|S6K-alpha-1|p90-Rsk1|p90Rsk1|p90S6K|p90rsk	ribosomal protein S6 kinase polypeptide 1	protein-coding
common_peak2-26869-29-38--0.173112138247138-0.327809114039775	chr2	156064905	156065812	+	0	NA	intron (NM_172674, intron 2 of 17)	B4A|SINE|B4	42975	NM_172674	228829	Mm.427078	NM_172674	ENSMUSG00000038116	Phf20	6820402O20Rik	PHD finger protein 20	protein-coding
common_peak2-26166-19-15-0.402687326661686-0.519193887192487	chr2	18998211	18998829	+	0	NA	Intergenic	L1Md_A|LINE|L1	78574	NR_024323	74629	Mm.117687	NR_024323	ENSMUSG00000026736	4930426L09Rik	-	RIKEN cDNA 4930426L09 gene	ncRNA
unique_peak2-35809-11-16--0.578769256998726-0.503257505534083	chr18	61726226	61726962	+	0	NA	intron (NM_146087, intron 2 of 9)	intron (NM_146087, intron 2 of 9)	11358	NM_146087	93687	Mm.26908	NM_146087	ENSMUSG00000024576	Csnk1a1	2610208K14Rik|4632404G05Rik|5430427P18Rik|CK1a|Csnk1a	casein kinase 1, alpha 1	protein-coding
common_peak2-26256-10-16--0.73104749624157-0.604422558181019	chr2	30205857	30206357	+	0	NA	exon (NM_139302, exon 4 of 11)	exon (NM_139302, exon 4 of 11)	8729	NM_139302	227700	Mm.33343	NM_139302	ENSMUSG00000026860	Sh3glb2	SPAS-1	SH3-domain GRB2-like endophilin B2	protein-coding
common_peak1-14298-14-10-0.439784541720347-0.519648556297791	chr2	158512958	158513679	+	0	NA	intron (NM_001159662, intron 1 of 10)	intron (NM_001159662, intron 1 of 10)	20447	NM_001159662	228852	Mm.150540	NM_153089	ENSMUSG00000037754	Ppp1r16b	ANKRD4|C130078N17Rik|TIMAP|Wdt4	protein phosphatase 1, regulatory (inhibitor) subunit 16B	protein-coding
common_peak2-29186-37-67--0.56146976976452-1.1534274303752	chr5	135393887	135394894	+	0	NA	Intergenic	Intergenic	-2990	NM_020504	57255	Mm.86652	NM_020504	ENSMUSG00000008843	Cldn13	2500004B14Rik	claudin 13	protein-coding
common_peak1-17235-23-14-0.814876908900562-1.09492971584134	chr6	128224197	128224992	+	0	NA	intron (NM_001080979, intron 1 of 10)	intron (NM_001080979, intron 1 of 10)	26237	NM_001080979	21679	Mm.14774	NM_011567	ENSMUSG00000030353	Tead4	ETFR-2|Etfr2|FR-19|Rtef1|TEAD-4|TEF-3|Tcf13r1|Tef3|Tefr|Tefr1|Tefr1a	TEA domain family member 4	protein-coding
common_peak1-13802-14-5-1.31425365963649-1.4372489031793	chr2	45019592	45020167	+	0	NA	Intergenic	Intergenic	-51080	NM_015753	24136	Mm.440702	NM_015753	ENSMUSG00000026872	Zeb2	9130203F04Rik|D130016B08Rik|SIP1|Zfhx1b|Zfx1b|Zfxh1b	zinc finger E-box binding homeobox 2	protein-coding
common_peak2-28969-24-53--0.961677599395752-2.00421908169978	chr5	103775010	103776227	+	0	NA	Intergenic	Lx6|LINE|L1	-47570	NR_040699	74624	Mm.389662	NR_040699		4930429D17Rik	-	RIKEN cDNA 4930429D17 gene	ncRNA
unique_peak1-5562-13-4-1.45654393575041-2.23384849113406	chr5	146845798	146846361	+	0	NA	Intergenic	L1Md_F3|LINE|L1	-24885	NR_030782	56388	Mm.301900	NM_019792	ENSMUSG00000029630	Cyp3a25	AI327008	cytochrome P450, family 3, subfamily a, polypeptide 25	protein-coding
unique_peak1-3654-7-2-1.21412832957703-1.45399745587252	chr19	38658149	38658731	+	0	NA	intron (NM_019588, intron 1 of 31)	intron (NM_019588, intron 1 of 31)	59753	NM_019588	74055	Mm.34031	NM_019588	ENSMUSG00000024998	Plce1	4933403A21Rik|PLCepsilon|Plce|mKIAA1516	phospholipase C, epsilon 1	protein-coding
common_peak2-23448-24-17-0.623284901325404-0.890873221665474	chr15	64223662	64224363	+	0	NA	Intergenic	Intergenic	-9531	NM_010026	13196	Mm.277236	NM_010026	ENSMUSG00000022377	Asap1	AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19	ArfGAP with SH3 domain, ankyrin repeat and PH domain1	protein-coding
common_peak1-14822-23-24-0.0779113147343562-0.318406410381916	chr3	90594488	90595545	+	0	NA	Intergenic	L1_Mm|LINE|L1	64188	NM_207263	384997	Mm.316644	NM_207263	ENSMUSG00000042250	Pglyrp4	Gm1478|Gm413	peptidoglycan recognition protein 4	protein-coding
unique_peak2-36145-4-12--1.72390023199434-1.85743853830261	chr2	18997532	18998115	+	0	NA	Intergenic	L1Md_A|LINE|L1	77877	NR_024323	74629	Mm.117687	NR_024323	ENSMUSG00000026736	4930426L09Rik	-	RIKEN cDNA 4930426L09 gene	ncRNA
unique_peak2-33267-7-11--0.785871670422967-1.21681515183528	chr10	128673271	128673901	+	0	NA	Intergenic	Intergenic	-1621	NM_207620	258232	Mm.391464	NM_207620	ENSMUSG00000096229	Olfr774	MOR111-11|MOR111-2	olfactory receptor 774	protein-coding
unique_peak1-5529-9-5-0.604650905683064-1.21398586181642	chr5	139442471	139443012	+	0	NA	Intergenic	Intergenic	28166	NM_008808	18590	Mm.2675	NM_008808	ENSMUSG00000025856	Pdgfa	-	platelet derived growth factor, alpha	protein-coding
unique_peak2-35911-6-8--0.60452689106201-1.03789460276074	chr19	5058493	5059017	+	0	NA	Intergenic	Intergenic	7947	NM_145495	225870	Mm.271922	NM_145495	ENSMUSG00000024883	Rin1	-	Ras and Rab interactor 1	protein-coding
common_peak1-18554-57-52-0.53811258551573-1.35978651500509	chr8	104382877	104384917	+	0	NA	Intergenic	Lx6|LINE|L1	925114	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
unique_peak2-35877-4-5--0.608423014574403-0.909929411522249	chr18	82568493	82568916	+	0	NA	intron (NM_008082, intron 2 of 2)	T-rich|Low_complexity|Low_complexity	7465	NM_008082	14427	Mm.6219	NM_008082	ENSMUSG00000024553	Galr1	Galnr1	galanin receptor 1	protein-coding
common_peak2-21225-9-8-0.0196884049619079-1.03275496310833	chr11	62813834	62814222	+	0	NA	Intergenic	Intergenic	49333	NM_025496	66338	Mm.46166	NM_025496	ENSMUSG00000042200	Cdrt4	1700019I23Rik	CMT1A duplicated region transcript 4	protein-coding
common_peak1-15266-16-15-0.118263642268062-0.328191099940264	chr4	28989556	28990406	+	0	NA	Intergenic	Intergenic	249686	NM_001122889	13841	Mm.257266	NM_010141	ENSMUSG00000028289	Epha7	Cek11|Ebk|Ehk3|Hek11|Mdk1	Eph receptor A7	protein-coding
unique_peak1-6480-14-3-1.89921616035764-2.80787975886178	chr7	112209750	112210386	+	0	NA	Intergenic	Intergenic	5306	NM_146358	258355	Mm.377452	NM_146358	ENSMUSG00000073914	Olfr677	MOR32-11	olfactory receptor 677	protein-coding
unique_peak1-2426-8-4-0.683294323060208-1.21878474469819	chr15	101175108	101175498	+	0	NA	Intergenic	Intergenic	-24480	NR_035462	100316694		NR_035462	miRBase:MI0009930	Mir1941	mmu-mir-1941	microRNA 1941	ncRNA
unique_peak1-2972-8-2-1.42025991722641-1.65811743852845	chr17	75020474	75020984	+	0	NA	intron (NM_007566, intron 33 of 72)	L1_Mus1|LINE|L1	93094	NM_007566	12211	Mm.442564	NM_007566	ENSMUSG00000024073	Birc6	A430032G04Rik|A430040A19Rik|AA501170|Bruce|D630005A10Rik|mKIAA1289	baculoviral IAP repeat-containing 6	protein-coding
unique_peak2-38235-2-5--1.50241675698448-1.08602067057793	chr6	118099226	118099553	+	0	NA	Intergenic	RMER15|LTR|ERVL	-10231	NM_030165	78752	Mm.300317	NM_030165	ENSMUSG00000042042	Csgalnact2	4632415D10Rik|Galnact2	chondroitin sulfate N-acetylgalactosaminyltransferase 2	protein-coding
unique_peak2-32984-5-5--0.289342836727009-0.909929411522249	chr10	59637901	59638277	+	0	NA	Intergenic	RLTR9D|LTR|ERVK	43919	NM_016803	53374	Mm.12866	NM_016803	ENSMUSG00000057337	Chst3	C6ST|C6ST-1|GST-0	carbohydrate (chondroitin 6/keratan) sulfotransferase 3	protein-coding
common_peak1-14031-67-66-0.478322292325223-1.3014705005645	chr2	116975174	116977656	+	0	NA	intron (NM_001277256, intron 1 of 4)	BGLII_A|LTR|ERVK	29608	NM_033524	114715	Mm.245890	NM_033524	ENSMUSG00000027351	Spred1	5730461F13Rik|AL024345|AW047647	sprouty protein with EVH-1 domain 1, related sequence	protein-coding
unique_peak2-36305-6-11--1.01956439034085-1.32595962126035	chr2	74579081	74579487	+	0	NA	intron (NM_010468, intron 1 of 2)	intron (NM_010468, intron 1 of 2)	-11457	NR_110447	102634401	Mm.235021	NR_110447		LOC102634401	-	uncharacterized LOC102634401	ncRNA
common_peak2-27126-104-204--0.374734898293289-1.57375978670124	chr3	19310310	19312231	+	0	NA	Intergenic	Intergenic	-97325	NM_001163536	66326	Mm.45615	NM_025489	ENSMUSG00000027606	Dnajc5b	1700008A05Rik	DnaJ (Hsp40) homolog, subfamily C, member 5 beta	protein-coding
common_peak1-12485-32-20-0.886774596440899-1.65365064026544	chr17	85162099	85163317	+	0	NA	intron (NM_028233, intron 13 of 37)	B2_Mm2|SINE|B2	27418	NM_028233	72416	Mm.217027	NM_028233	ENSMUSG00000024120	Lrpprc	3110001K13Rik|C76645|Gp130|Lrp130|Lsfc	leucine-rich PPR-motif containing	protein-coding
unique_peak2-33095-10-14--0.550475250599749-0.446472590016315	chr10	80319950	80320671	+	0	NA	intron (NM_175195, intron 1 of 14)	intron (NM_175195, intron 1 of 14)	2290	NM_175195	73218	Mm.3285	NM_175195	ENSMUSG00000035206	Sppl2b	3110056O03Rik|AW550292|PSL1	signal peptide peptidase like 2B	protein-coding
common_peak2-21387-13-7-0.778472030637769-0.817533494790411	chr11	79739093	79739478	+	0	NA	Intergenic	B1_Mm|SINE|Alu	36604	NM_144826	216987	Mm.274961	NM_144826	ENSMUSG00000035575	Utp6	4732497O03Rik|HCA66	UTP6, small subunit (SSU) processome component, homolog (yeast)	protein-coding
common_peak2-22253-24-32--0.251184216590737-0.358978896303361	chr13	3538108	3538752	+	0	NA	intron (NM_008112, intron 1 of 10)	intron (NM_008112, intron 1 of 10)	1109	NM_008112	14569	Mm.153226	NM_008112	ENSMUSG00000021218	Gdi2	GDI-B|GDIB|Gdi3	guanosine diphosphate (GDP) dissociation inhibitor 2	protein-coding
common_peak1-10508-21-43--0.889942353371062-1.48724131519613	chr14	96517925	96518792	+	0	NA	intron (NM_053105, intron 10 of 10)	intron (NM_053105, intron 10 of 10)	237873	NM_025733	66732	Mm.75060	NM_025733	ENSMUSG00000034689	4921530L21Rik	-	RIKEN cDNA 4921530L21 gene	protein-coding
unique_peak1-5205-7-2-1.21412832957703-1.45399745587252	chr5	35672725	35673155	+	0	NA	Intergenic	GA-rich|Low_complexity|Low_complexity	-31262	NR_046060	74429	Mm.399502	NR_046060		4930478P22Rik	4933405A14Rik	RIKEN cDNA 4930478P22 gene	ncRNA
common_peak2-26622-15-9-0.690236655668294-0.732381977911291	chr2	118489758	118490337	+	0	NA	intron (NM_001033254, intron 1 of 10)	intron (NM_001033254, intron 1 of 10)	734	NM_001033254	214230	Mm.241857	NM_001033254	ENSMUSG00000074923	Pak6	4732456M09	p21 protein (Cdc42/Rac)-activated kinase 6	protein-coding
common_peak1-18944-42-30-0.788133017480309-1.81099027427053	chr9	48407260	48408633	+	0	NA	intron (NM_010924, intron 2 of 2)	intron (NM_010924, intron 2 of 2)	5236	NM_010924	18113	Mm.8362	NM_010924	ENSMUSG00000032271	Nnmt	-	nicotinamide N-methyltransferase	protein-coding
common_peak1-18119-8-8--0.164702583494742-1.00793137938329	chr8	4492992	4493448	+	0	NA	promoter-TSS (NM_026058)	promoter-TSS (NM_026058)	-185	NM_026058	67260	Mm.35511	NM_026058	ENSMUSG00000008206	Cers4	2900019C14Rik|Lass4|Trh1	ceramide synthase 4	protein-coding
common_peak2-21844-50-38-0.755538097616704-1.95835867484699	chr11	120850303	120851857	+	0	NA	intron (NM_027874, intron 1 of 9)	intron (NM_027874, intron 1 of 9)	1567	NM_139059	104318	Mm.216227	NM_027874	ENSMUSG00000025162	Csnk1d	1200006A05Rik|AA409348|D930010H05Rik	casein kinase 1, delta	protein-coding
common_peak1-12877-58-62-0.31867001139058-0.747189460713368	chr18	77064571	77066306	+	0	NA	Intergenic	L1MC1|LINE|L1	-29706	NM_001109743	664805	Mm.329543	NM_001109743	ENSMUSG00000091519	Skor2	Corl2|EG664805|Fussel18|Gm7348	SKI family transcriptional corepressor 2	protein-coding
common_peak2-26312-18-11-0.727956650507195-0.876666802405043	chr2	32712300	32712879	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-9832	NM_001113569	20910	Mm.278865	NM_009295	ENSMUSG00000026797	Stxbp1	AI317162|AI326233|MMS10-G|Ms10g|Munc-18a|Munc18-1|N-sec1|Rb-sec1|Sxtbp1|Unc18-1|Unc18h|nsec1	syntaxin binding protein 1	protein-coding
common_peak2-19836-8-8--0.164702583494742-1.00793137938329	chr1	90900459	90900863	+	0	NA	Intergenic	Intergenic	-12027	NR_040471	73475	Mm.491040	NR_040471		1700067G17Rik	-	RIKEN cDNA 1700067G17 gene	ncRNA
common_peak1-10916-15-11-0.4272022498345-0.503257505534083	chr15	5512931	5513709	+	0	NA	intron (NR_045274, intron 2 of 4)	Lx9|LINE|L1	67002	NR_045274	71432	Mm.291087	NR_045274		5430437J10Rik	-	RIKEN cDNA 5430437J10 gene	ncRNA
unique_peak2-34064-4-6--0.830815435910851-0.989110657569874	chr13	97927009	97927414	+	0	NA	intron (NM_001271464, intron 10 of 19)	B1_Mur1|SINE|Alu	19319	NM_001271464	320806	Mm.219675	NM_177266	ENSMUSG00000021666	Gfm2	6530419G12Rik|A930009M04Rik|EF-G2mt|EFG2|MST027|RRF2mt	G elongation factor, mitochondrial 2	protein-coding
common_peak2-26759-36-39-0.157392991280392-0.394172396164276	chr2	140066058	140066749	+	0	NA	intron (NM_001033296, intron 18 of 19)	intron (NM_001033296, intron 18 of 19)	70021	NM_027093	69487	Mm.287921	NM_027093		Ndufaf5	2310003L22Rik	NADH dehydrogenase (ubiquinone) complex I, assembly factor 5	protein-coding
common_peak2-28605-26-22-0.404337136101449-0.569352520859861	chr5	23712039	23712761	+	0	NA	Intergenic	Lx8|LINE|L1	41619	NM_153092	231042	Mm.45513	NM_153092	ENSMUSG00000048439	Nupl2	AV116043|CG1|NLP-1|Nlp1	nucleoporin like 2	protein-coding
unique_peak2-38717-10-18--0.891512168434816-0.804350088532826	chr7	111122030	111122700	+	0	NA	Intergenic	Intergenic	-5325	NM_147118	259122	Mm.377860	NM_147118	ENSMUSG00000094520	Olfr635	MOR5-2	olfactory receptor 635	protein-coding
common_peak2-23482-22-16-0.559821263837065-0.733541631673787	chr15	74920942	74921714	+	0	NA	Intergenic	Intergenic	21051	NM_001099217	100041546	Mm.482110	NM_001099217	ENSMUSG00000022584	Ly6c2	Ly-6C.2|Ly-6C2	lymphocyte antigen 6 complex, locus C2	protein-coding
unique_peak2-39230-10-17--0.813509656433543-0.699649909729472	chr8	111299591	111300278	+	0	NA	intron (NM_007496, intron 1 of 9)	intron (NM_007496, intron 1 of 9)	61390	NM_007496	11906	Mm.416972	NM_007496	ENSMUSG00000038872	Zfhx3	A230102L03Rik|Atbf1|WBP9|mKIAA4228	zinc finger homeobox 3	protein-coding
common_peak1-19331-22-34--0.481998911857562-0.600314449189972	chrX	9272367	9273410	+	0	NA	Intergenic	Intergenic	-32779	NM_025975	67117	Mm.29150	NM_025975	ENSMUSG00000031176	Dynlt3	2310075M16Rik|AU042796|Tcte1l	dynein light chain Tctex-type 3	protein-coding
common_peak1-17022-74-97-0.101176732863399-0.369847117739386	chr6	91201090	91203440	+	0	NA	intron (NM_001081437, intron 3 of 16)	intron (NM_001081437, intron 3 of 16)	39507	NM_007992	14115	Mm.249146	NM_007992	ENSMUSG00000064080	Fbln2	5730577E14Rik|FIBL-2	fibulin 2	protein-coding
common_peak2-19575-51-72--0.114900733277445-0.340093681644832	chr1	13659912	13660844	+	0	NA	intron (NM_001011873, intron 1 of 3)	intron (NM_001011873, intron 1 of 3)	1526	NM_001011873	381246	Mm.311142	NM_001011873	ENSMUSG00000067813	Xkr9	Gm1620|XRG9	X Kell blood group precursor related family member 9 homolog	protein-coding
unique_peak2-37836-5-8--0.874305337448166-1.10484139239135	chr5	134314947	134315412	+	0	NA	Intergenic	Intergenic	-260439	NM_030719	80909	Mm.45218	NM_030719		Gatsl2	7530428J21Rik|AW742413|Gats|Gatsl1	GATS protein-like 2	protein-coding
common_peak2-29303-68-88-0.0942273483318985-0.359187433159348	chr5	145139566	145141037	+	0	NA	Intergenic	ORR1B1|LTR|MaLR	20907	NR_102373	100579137		NR_102372		Dmr	-	Dmrt1 related	ncRNA
unique_peak1-1265-9-1-2.18961340640422-2.31132995230379	chr11	117206942	117207470	+	0	NA	intron (NM_001113488, intron 1 of 9)	intron (NM_001113488, intron 1 of 9)	13579	NM_001113488	53860	Mm.38450	NM_017380	ENSMUSG00000059248	Sept9	MSF1|Msf|PNUTL4|Sint1	septin 9	protein-coding
unique_peak1-4312-8-3-1.00522241794757-1.39487600375387	chr2	150638233	150638779	+	0	NA	intron (NM_153781, intron 5 of 19)	intron (NM_153781, intron 5 of 19)	25974	NM_153781	110078	Mm.222584	NM_153781	ENSMUSG00000033059	Pygb	-	brain glycogen phosphorylase	protein-coding
common_peak2-28998-37-36-0.316539705856869-0.566504029620424	chr5	108312155	108313270	+	0	NA	Intergenic	Intergenic	-8586	NM_007964	14020	Mm.35796	NM_007964	ENSMUSG00000011831	Evi5	NB4S	ecotropic viral integration site 5	protein-coding
unique_peak1-5350-10-2-1.77145284428761-2.09384600808989	chr5	91725334	91725936	+	0	NA	Intergenic	Intergenic	-13533	NR_040428	100503265	Mm.125059	NR_040428		Gm19619	-	predicted gene, 19619	ncRNA
unique_peak1-3935-19-2-2.81772482594053-4.27364484827118	chr2	27504019	27504847	+	0	NA	Intergenic	B2_Mm1a|SINE|B2	-28288	NM_011305	20181	Mm.24624	NM_011305	ENSMUSG00000015846	Rxra	9530071D11Rik|Nr2b1|RXRalpha1	retinoid X receptor alpha	protein-coding
common_peak2-26097-19-25--0.297752391479405-0.376654945067947	chr2	3284168	3285121	+	0	NA	promoter-TSS (NM_145921)	promoter-TSS (NM_145921)	-803	NM_145921	99035	Mm.13808	NM_145921	ENSMUSG00000026645	Olah	AI607300|E230009B14Rik|Thedc1	oleoyl-ACP hydrolase	protein-coding
common_peak1-18498-12-11-0.0638134843664826-0.337263207250336	chr8	85700623	85701060	+	0	NA	intron (NM_027758, intron 1 of 17)	GA-rich|Low_complexity|Low_complexity	11590	NM_027758	71310	Mm.24031	NM_027758	ENSMUSG00000031709	Tbc1d9	4933431N12Rik|AI847101|AW490653|C76116	TBC1 domain family, member 9	protein-coding
common_peak1-7441-171-221-0.374061302032012-2.22167553828826	chr1	30948836	30951163	+	0	NA	Intergenic	Intergenic	-29898	NM_001081080	213109	Mm.194486	NM_025871	ENSMUSG00000048874	Phf3	2310061N19Rik|mKIAA0244	PHD finger protein 3	protein-coding
common_peak1-9816-11-7-0.508693584251613-1.21681515183528	chr12	69999282	69999833	+	0	NA	Intergenic	L1Md_F|LINE|L1	260616	NM_009093	20090	Mm.379006	NM_009093	ENSMUSG00000034892	Rps29	-	ribosomal protein S29	protein-coding
common_peak2-20641-8-23--1.57974008277359-1.94520747672513	chr10	80826624	80827056	+	0	NA	TTS (NM_001014836)	TTS (NM_001014836)	1725	NM_001014836	432479	Mm.440450	NM_001014836	ENSMUSG00000020234	4930404N11Rik	2210409H10Rik|5730551K18Rik|AI854616	RIKEN cDNA 4930404N11 gene	protein-coding
common_peak1-12528-33-40--0.026214442092555-0.301029995663988	chr18	74267954	74268932	+	0	NA	Intergenic	MTB|LTR|MaLR	-43840	NM_172632	225724	Mm.254517	NM_172632	ENSMUSG00000024558	Mapk4	A330097D03Rik|Erk3|Prkm4|p63Mapk	mitogen-activated protein kinase 4	protein-coding
unique_peak1-3288-9-7-0.18961340640422-1.05908390183068	chr18	75018752	75019225	+	0	NA	Intergenic	MTC|LTR|MaLR	80122	NM_177470	52538	Mm.245724	NM_177470	ENSMUSG00000036880	Acaa2	0610011L04Rik|AI255831|AI265397|D18Ertd240e	acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase)	protein-coding
common_peak2-23351-14-11-0.314253659636488-0.435191258261915	chr15	41651016	41651441	+	0	NA	intron (NM_130885, intron 6 of 14)	intron (NM_130885, intron 6 of 14)	-11276	NM_001130164	170719	Mm.254267	NM_130885	ENSMUSG00000022307	Oxr1	2210416C20Rik|C7|C7B	oxidation resistance 1	protein-coding
common_peak1-19261-11-9-0.186765489364251-0.344532117358383	chr9	111270868	111271507	+	0	NA	intron (NM_001164659, intron 11 of 21)	intron (NM_001164659, intron 11 of 21)	56944	NM_001164659	320429	Mm.270754	NM_001164659	ENSMUSG00000062296	Trank1	A230061D21Rik|C030048J01Rik|Gm187|Lba1	tetratricopeptide repeat and ankyrin repeat containing 1	protein-coding
unique_peak2-33823-4-6--0.830815435910851-0.989110657569874	chr12	4817620	4818054	+	0	NA	Intergenic	Intergenic	-6577	NM_025323	66055	Mm.102627	NM_025323	ENSMUSG00000037361	Sf3b6	0610009D07Rik|6030419K15Rik|AV001342|Sf3b14	splicing factor 3B, subunit 6	protein-coding
common_peak1-18121-16-10-0.658832023630764-0.699649909729472	chr8	4613171	4613725	+	0	NA	intron (NM_145591, intron 1 of 3)	intron (NM_145591, intron 1 of 3)	278	NM_145591	233987	Mm.102799	NM_145591		Zfp958	-	zinc finger protein 958	protein-coding
unique_peak1-6041-8-2-1.42025991722641-1.65811743852845	chr6	115294570	115295096	+	0	NA	Intergenic	Intergenic	-16406	NM_001127330	19016	Mm.3020	NM_011146	ENSMUSG00000000440	Pparg	Nr1c3|PPAR-gamma|PPAR-gamma2|PPARgamma|PPARgamma2	peroxisome proliferator activated receptor gamma	protein-coding
common_peak2-27651-8-7-0.00522241794757061-1.00793137938329	chr3	108085838	108086270	+	0	NA	promoter-TSS (NM_001271599)	promoter-TSS (NM_001271599)	-928	NM_001271599	20661	Mm.157119	NM_019972	ENSMUSG00000068747	Sort1	2900053A11Rik|AI852375|Ntr3|Ntsr3	sortilin 1	protein-coding
common_peak1-10641-26-10-1.46846747352116-2.57346781069461	chr14	46789721	46790963	+	0	NA	Intergenic	Intergenic	86640	NR_002875	218963	Mm.282093	NR_002875		Gm1821	-	ubiquitin pseudogene	pseudo
unique_peak1-5828-8-1-2.00522241794757-2.05605744720049	chr6	72274619	72275026	+	0	NA	intron (NM_138592, intron 10 of 12)	intron (NM_138592, intron 10 of 12)	20218	NM_147779	20388	Mm.46033	NM_147779	ENSMUSG00000056370	Sftpb	AI562151|SF-B|SP-B|Sftp-3|Sftp3	surfactant associated protein B	protein-coding
common_peak2-30376-9-13--0.617741515653384-0.459837087125828	chr7	28952195	28952671	+	0	NA	Intergenic	Intergenic	-2334	NM_007991	14113	Mm.4595	NM_007991	ENSMUSG00000046865	Fbl	AL022665|FIB|FLRN|RNU3IP1	fibrillarin	protein-coding
common_peak1-16603-9-7-0.18961340640422-1.05908390183068	chr5	150333168	150333692	+	0	NA	intron (NM_029440, intron 1 of 22)	intron (NM_029440, intron 1 of 22)	2176	NM_029440	381693	Mm.136919	NM_029440	ENSMUSG00000029658	Wdr95	4930434E21Rik	WD40 repeat domain 95	protein-coding
common_peak1-14083-40-41-0.266658259972337-0.537526587463064	chr2	121955768	121957138	+	0	NA	intron (NM_026251, intron 2 of 17)	intron (NM_026251, intron 2 of 17)	-12331	NM_145531	214585	Mm.222303	NM_145531	ENSMUSG00000033396	Spg11	6030465E24Rik|A330015I11|C530005A01Rik	spastic paraplegia 11	protein-coding
unique_peak2-35163-5-5--0.289342836727009-0.909929411522249	chr16	34095572	34096005	+	0	NA	intron (NM_177357, intron 34 of 59)	intron (NM_177357, intron 34 of 59)	-128699	NM_009471	22247	Mm.13145	NM_009471	ENSMUSG00000022814	Umps	1700095D23Rik|AA408257|AL033308|BB164745	uridine monophosphate synthetase	protein-coding
common_peak2-26187-35-32-0.386976139104051-0.652627812244279	chr2	25145490	25146454	+	0	NA	promoter-TSS (NM_001242940)	promoter-TSS (NM_001242940)	541	NM_146117	227618	Mm.275228	NM_146117	ENSMUSG00000026961	Lrrc26	-	leucine rich repeat containing 26	protein-coding
common_peak2-19666-11-5-0.923731083530457-1.477227296591	chr1	54602759	54603062	+	0	NA	intron (NM_001163314, intron 3 of 26)	L2a|LINE|L2	11618	NM_001163314	241062	Mm.103539	NM_175508	ENSMUSG00000073678	Pgap1	5033403E17Rik|9030223K07Rik|A530084K22|D230012E17Rik|oto	post-GPI attachment to proteins 1	protein-coding
unique_peak1-6258-10-2-1.77145284428761-2.09384600808989	chr7	19831088	19831719	+	0	NA	3' UTR (NM_207525, exon 2 of 2)	3' UTR (NM_207525, exon 2 of 2)	17665	NM_207525	403187	Mm.239583	NM_207525		Opa3	D630048P19Rik|Gm1425|Gm472	optic atrophy 3	protein-coding
common_peak1-10683-47-52-0.206920970203349-0.456849196733765	chr14	54575596	54577483	+	0	NA	Intergenic	Intergenic	290924	NM_001205242	100568452	Mm.213248	NM_001205242		A430107P09Rik	Va10	RIKEN cDNA A430107P09 gene	protein-coding
common_peak2-29366-20-17-0.318149783148881-0.440610794044987	chr5	151233352	151233912	+	0	NA	intron (NM_172887, intron 40 of 60)	intron (NM_172887, intron 40 of 60)	71162	NR_024513	194292	Mm.300184	NR_024513		Gm5	Gm1812	predicted gene 5	ncRNA
common_peak1-17512-36-80--0.86052891671687-2.45778990690048	chr7	27486793	27487859	+	0	NA	Intergenic	L1_Mm|LINE|L1	-15877	NM_001081148	243881	Mm.294678	NM_001081148	ENSMUSG00000040650	Cyp2b23	EG243881	cytochrome P450, family 2, subfamily b, polypeptide 23	protein-coding
common_peak2-29192-11-10-0.0492619656143161-0.31137425193576	chr5	135914367	135914901	+	0	NA	intron (NM_146001, intron 11 of 30)	intron (NM_146001, intron 11 of 30)	-44218	NM_148932	107939	Mm.28399	NM_148932	ENSMUSG00000053293	Pom121	2610027A18Rik|C80273|mKIAA0618	nuclear pore membrane protein 121	protein-coding
common_peak1-17371-31-19-0.903310575925761-1.57996244908225	chr7	66338521	66339685	+	0	NA	Intergenic	Intergenic	-145017	NM_173010	22215	Mm.9002	NM_011668	ENSMUSG00000025326	Ube3a	4732496B02|5830462N02Rik|A130086L21Rik|Hpve6a|mKIAA4216	ubiquitin protein ligase E3A	protein-coding
common_peak2-27206-9-19--1.13231468848314-1.09394599973099	chr3	40846074	40846769	+	0	NA	Intergenic	Intergenic	40547	NM_027558	70804	Mm.40321	NM_027558	ENSMUSG00000049940	Pgrmc2	4631434O19Rik|5730409G06Rik|DG6|PMBP	progesterone receptor membrane component 2	protein-coding
common_peak1-16003-22-19-0.325356010200042-0.479250674391597	chr5	33936399	33937437	+	0	NA	Intergenic	Intergenic	35366	NM_178390	74504	Mm.294695	NM_178390	ENSMUSG00000037339	Fam53a	2410018C17Rik|5430419M09Rik|Dntnp	family with sequence similarity 53, member A	protein-coding
unique_peak2-32790-0-4--3.16205902536157-1.10720996964787	chr1	181000817	181001153	+	0	NA	intron (NM_027188, intron 8 of 11)	MYSERV6-int|LTR|ERVK	447149	NM_027188	69726	Mm.222338	NM_027188		Smyd3	2410008A19Rik|Zmynd1	SET and MYND domain containing 3	protein-coding
unique_peak1-1979-18-0-4.31291915122835-NA	chr14	121711122	121711987	+	0	NA	intron (NM_145465, intron 2 of 10)	intron (NM_145465, intron 2 of 10)	66898	NM_145465	223255	Mm.390756	NM_145465	ENSMUSG00000063410	Stk24	1810013H02Rik|C76483|MST-3|Mst3|STE20	serine/threonine kinase 24	protein-coding
unique_peak1-2527-11-5-0.923731083530457-1.477227296591	chr16	20804714	20805260	+	0	NA	Intergenic	(TC)n|Simple_repeat|Simple_repeat	-70403	NM_009379	21832	Mm.3943	NM_009379	ENSMUSG00000022847	Thpo	Mgdf|Ml|Mpllg|Tpo	thrombopoietin	protein-coding
common_peak1-17417-10-14--0.550475250599749-0.446472590016315	chr7	6383560	6384076	+	0	NA	TTS (NM_001134752)	TTS (NM_001134752)	-8795	NM_177061	257882	Mm.479489	NM_177061	ENSMUSG00000090824	Olfr1344	4930415J05Rik|MOR124-1	olfactory receptor 1344	protein-coding
common_peak2-27868-6-12--1.13504160776079-1.45089835786865	chr3	159495032	159495364	+	0	NA	Intergenic	Intergenic	-7461	NR_037590	68151	Mm.6766	NM_026582		Wls	5031439A09Rik|AI173978|AI987742|Gpr177	wntless homolog (Drosophila)	protein-coding
common_peak1-18059-6-10--0.894033508256995-1.21398586181642	chr7	145222582	145223095	+	0	NA	Intergenic	Intergenic	366575	NM_183289	70571	Mm.334297	NM_183289	ENSMUSG00000091002	Tcerg1l	5730476P14Rik	transcription elongation regulator 1-like	protein-coding
unique_peak1-6460-9-7-0.18961340640422-1.05908390183068	chr7	101368136	101368656	+	0	NA	Intergenic	Intergenic	1140007	NM_021427	58238	Mm.113787	NM_021427		Fam181b	A830059I20Rik|AB041569	family with sequence similarity 181, member B	protein-coding
unique_peak2-38745-6-11--1.01956439034085-1.32595962126035	chr7	114095268	114095969	+	0	NA	Intergenic	RMER1C|Other|Other	-3792	NM_146601	258594	Mm.377584	NM_146601	ENSMUSG00000045581	Olfr710	MOR260-3	olfactory receptor 710	protein-coding
unique_peak2-35971-7-7--0.200909169701811-0.97990265578305	chr19	18889744	18890208	+	0	NA	intron (NM_153417, intron 17 of 38)	intron (NM_153417, intron 17 of 38)	65503	NM_153417	225997	Mm.215171	NM_153417	ENSMUSG00000024727	Trpm6	CHAK2|TRPM6/CHAK2	transient receptor potential cation channel, subfamily M, member 6	protein-coding
common_peak2-21855-32-22-0.755530063162647-1.34355844763204	chr11	121720318	121720942	+	0	NA	Intergenic	MurSatRep1|Unknown|Unknown	29098	NM_029049	74675	Mm.61213	NM_029049	ENSMUSG00000039198	Ptchd3	4930451E13Rik|4933440L20Rik|RNDEu-3	patched domain containing 3	protein-coding
unique_peak2-37729-7-13--1.00826409175941-0.697979855752659	chr5	108660178	108660865	+	0	NA	intron (NM_028481, intron 28 of 28)	MT2B|LTR|ERVL	-37395	NM_026106	13486	Mm.303534	NM_026106	ENSMUSG00000029265	Dr1	1700121L09Rik|Dr1l|NC2|NC2beta	down-regulator of transcription 1	protein-coding
unique_peak2-32541-8-10--0.454209200689727-1.078512453669	chr1	71003401	71004038	+	0	NA	Intergenic	Intergenic	145827	NM_007525	12021	Mm.10764	NM_007525	ENSMUSG00000026196	Bard1	ENSMUSG00000060893|ENSMUSG00000073653	BRCA1 associated RING domain 1	protein-coding
common_peak2-20546-12-10-0.189344366450341-0.386243247519795	chr10	68166028	68166531	+	0	NA	Intergenic	(CATA)n|Simple_repeat|Simple_repeat	-20215	NM_177794	327766	Mm.2479	NM_177794	ENSMUSG00000060044	Tmem26	3230401A06|AI195372	transmembrane protein 26	protein-coding
unique_peak1-5241-13-1-2.77847203063777-3.64038867156802	chr5	51192459	51193076	+	0	NA	Intergenic	Intergenic	650195	NR_040696	73965	Mm.243823	NR_040696		4930448I18Rik	-	RIKEN cDNA 4930448I18 gene	ncRNA
unique_peak1-6166-7-6--0.00826409175941478-0.97990265578305	chr6	143149866	143150389	+	0	NA	intron (NM_029250, intron 6 of 7)	intron (NM_029250, intron 6 of 7)	34377	NM_029250	75320	Mm.272548	NM_029250	ENSMUSG00000030275	Etnk1	1110061E11Rik|4930555L11Rik|AI195356|AI841245|C80956|D6Ertd3e|EKI1	ethanolamine kinase 1	protein-coding
common_peak2-21350-14-12-0.198776442216552-0.373562084705529	chr11	77782911	77783499	+	0	NA	intron (NM_001291225, intron 5 of 15)	B3A|SINE|B2	-13113	NM_174852	268448	Mm.274329	NM_174852	ENSMUSG00000037791	Phf12	2410142K10Rik|F630045O13|PF1|mKIAA1523	PHD finger protein 12	protein-coding
common_peak1-12475-15-10-0.552733131918359-0.604422558181019	chr17	84140545	84141345	+	0	NA	intron (NM_001171053, intron 4 of 13)	intron (NM_001171053, intron 4 of 13)	35442	NM_001171052	116871	Mm.277668	NM_054082	ENSMUSG00000055817	Mta3	1110002J22Rik|mKIAA1266	metastasis associated 3	protein-coding
unique_peak1-3299-9-4-0.867685311516858-1.36011389749466	chr18	75685751	75686327	+	0	NA	intron (NM_201354, intron 7 of 11)	intron (NM_201354, intron 7 of 11)	11740	NR_045879	100038353	Mm.440724	NR_045879	ENSMUSG00000097712	Gm10532	ENSMUSG00000073534	predicted gene 10532	ncRNA
common_peak1-7871-49-78--0.297496925151919-0.601241822381509	chr1	133669755	133671321	+	0	NA	Intergenic	ORR1A4-int|LTR|MaLR	-23434	NM_178079	212933	Mm.23844	NM_178079	ENSMUSG00000042251	Pm20d1	4732466D17Rik|AI098026	peptidase M20 domain containing 1	protein-coding
unique_peak1-2152-11-1-2.50869358425161-2.83420869758413	chr15	59064741	59065272	+	0	NA	Intergenic	RLTR10A|LTR|ERVK	-73497	NR_045613	100416830	Mm.490788	NR_045613	ENSMUSG00000098528	Zfp572	4930472F24Rik	zinc finger protein 572	pseudo
common_peak1-14834-23-47--0.863194996212076-1.63155726056134	chr3	92280445	92281344	+	0	NA	Intergenic	Intergenic	8909	NM_009264	20753	Mm.331191	NM_009264	ENSMUSG00000050359	Sprr1a	AI528815|SPR1a|mSPRR1A	small proline-rich protein 1A	protein-coding
common_peak2-21091-13-9-0.456543935750406-0.53895475198017	chr11	51615393	51615966	+	0	NA	Intergenic	Intergenic	38514	NM_025535	66397	Mm.196592	NM_025535	ENSMUSG00000020386	Sar1b	2310075M17Rik|2900019I22Rik|CMRD|Sara1b|Sara2|Sarb	SAR1 gene homolog B (S. cerevisiae)	protein-coding
common_peak1-18595-9-17--0.980311595038092-0.844317084070804	chr8	106619202	106619777	+	0	NA	Intergenic	Intergenic	-6036	NM_009868	12562	Mm.21767	NM_009868	ENSMUSG00000031871	Cdh5	7B4|AA408225|Cd144|VE-Cad|VECD|VEcad|Vec	cadherin 5	protein-coding
common_peak2-22323-11-18--0.739233929191972-0.671582559449692	chr13	23423306	23423972	+	0	NA	Intergenic	Intergenic	37438	NM_001286156	218100	Mm.286454	NM_172586	ENSMUSG00000046351	Zfp322a	Znf322|Znf322a	zinc finger protein 322A	protein-coding
unique_peak1-708-13-7-0.778472030637769-0.817533494790411	chr10	85512214	85513000	+	0	NA	3' UTR (NM_013722, exon 14 of 14)	3' UTR (NM_013722, exon 14 of 14)	27933	NM_153195	69754	Mm.44236	NM_153195	ENSMUSG00000001786	Fbxo7	2410015K21Rik|A230052G17Rik|AI117679|AW260462|C85118	F-box protein 7	protein-coding
unique_peak2-36514-6-7--0.434601889619698-0.97990265578305	chr2	158153778	158154218	+	0	NA	intron (NM_008489, intron 13 of 14)	intron (NM_008489, intron 13 of 14)	21769	NM_008489	16803	Mm.218846	NM_008489	ENSMUSG00000016024	Lbp	Bpifd2|Ly88	lipopolysaccharide binding protein	protein-coding
common_peak2-30467-29-45--0.411271875441902-0.573175361577109	chr7	46795643	46796727	+	0	NA	TTS (NM_001004139)	TTS (NM_001004139)	23049	NM_001004139	70227	Mm.333800	NM_001004139	ENSMUSG00000068959	Zfp619	3000002G13Rik	zinc finger protein 619	protein-coding
common_peak2-25459-8-6-0.197867495889966-1.03789460276074	chr19	4228804	4229176	+	0	NA	Intergenic	Intergenic	-2909	NM_027196	69745	Mm.32518	NM_027196	ENSMUSG00000024854	Pold4	2410012M21Rik|AI463381|AW060307|Polds|p12	polymerase (DNA-directed), delta 4	protein-coding
unique_peak2-39119-3-7--1.41398308995928-1.23214870625617	chr8	83332081	83332395	+	0	NA	intron (NM_001301298, intron 1 of 10)	intron (NM_001301298, intron 1 of 10)	-68880	NM_053124	93762	Mm.246803	NM_053124		Smarca5	4933427E24Rik|D030040M08Rik|D330027N15Rik|MommeD4|Snf2h	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5	protein-coding
common_peak1-13712-9-8-0.0196884049619079-1.03275496310833	chr2	30718438	30718993	+	0	NA	intron (NM_009116, intron 1 of 3)	intron (NM_009116, intron 1 of 3)	17828	NM_009116	20204	Mm.1802	NM_009116	ENSMUSG00000039476	Prrx2	Prx2|S8	paired related homeobox 2	protein-coding
common_peak1-15756-14-5-1.31425365963649-1.4372489031793	chr4	150582275	150582819	+	0	NA	intron (NM_001081557, intron 6 of 23)	intron (NM_001081557, intron 6 of 23)	-150485	NM_009498	22319	Mm.273930	NM_009498	ENSMUSG00000028955	Vamp3	D130027G05Rik|VAMP-3|ceb	vesicle-associated membrane protein 3	protein-coding
common_peak1-14573-19-16-0.315224485411347-0.448200956659575	chr3	38257418	38258174	+	0	NA	Intergenic	Intergenic	125942	NM_001167883	99696	Mm.290937	NM_001033198	ENSMUSG00000044864	Ankrd50	AI662170|E430012K20Rik|mKIAA1223|mKIAA3019	ankyrin repeat domain 50	protein-coding
unique_peak1-3110-7-2-1.21412832957703-1.45399745587252	chr18	32053456	32053882	+	0	NA	intron (NM_028866, intron 17 of 21)	intron (NM_028866, intron 17 of 21)	17888	NM_026006	67158	Mm.31537	NM_026006	ENSMUSG00000044982	Sft2d3	2610206C24Rik|AI847965|AW046173	SFT2 domain containing 3	protein-coding
unique_peak1-100-9-1-2.18961340640422-2.31132995230379	chr1	52687787	52688250	+	0	NA	intron (NR_024590, intron 1 of 8)	intron (NR_024590, intron 1 of 8)	469	NM_001142647	227094	Mm.83541	NM_172654	ENSMUSG00000043015	Tmem194b	5330401P04Rik|9830163O08	transmembrane protein 194B	protein-coding
common_peak1-9933-14-27--0.908138761699959-1.05601013496724	chr12	105684748	105685375	+	0	NA	Intergenic	Intergenic	26385	NM_010351	14836	Mm.129	NM_010351	ENSMUSG00000021095	Gsc	-	goosecoid homeobox	protein-coding
common_peak1-9020-21-32--0.474904854092218-0.550049347815239	chr11	61578455	61579417	+	0	NA	Intergenic	B1_Mur4|SINE|Alu	-3346	NM_001164243	212627	Mm.27703	NM_144806	ENSMUSG00000020528	Prpsap2	A230054F23Rik	phosphoribosyl pyrophosphate synthetase-associated protein 2	protein-coding
common_peak1-17556-13-8-0.608547029195456-0.660903317613904	chr7	30625560	30626158	+	0	NA	Intergenic	B2_Mm2|SINE|B2	12808	NM_173738	233057	Mm.296864	NM_173738	ENSMUSG00000050855	Zfp940	-	zinc finger protein 940	protein-coding
common_peak2-31510-13-9-0.456543935750406-0.53895475198017	chr8	107489519	107489988	+	0	NA	intron (NM_197999, intron 5 of 11)	intron (NM_197999, intron 5 of 11)	4135	NM_197999	72361	Mm.26580	NM_197999	ENSMUSG00000031877	Ces2g	2210023G05Rik|Ces2l	carboxylesterase 2G	protein-coding
unique_peak1-1283-12-6-0.841421063030034-1.58711810488664	chr11	118378916	118379473	+	0	NA	intron (NM_001285436, intron 3 of 13)	RSINE1|SINE|B4	40920	NM_172573	217364	Mm.473963	NM_172573	ENSMUSG00000033857	Engase	C130099A03|D230014K01Rik	endo-beta-N-acetylglucosaminidase	protein-coding
common_peak1-18037-12-11-0.0638134843664826-0.337263207250336	chr7	143614329	143614911	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-73522	NR_040459	330664	Mm.127762	NR_040459		C230079O03Rik	C230079O03	RIKEN cDNA C230079O03 gene	ncRNA
common_peak1-10101-20-25--0.212364933549899-0.342639663781856	chr13	25019851	25020811	+	0	NA	intron (NM_172532, intron 1 of 9)	intron (NM_172532, intron 1 of 9)	-8939	NR_102323	493800	Mm.458692	NR_102323		9330162012Rik	-	cDNA RIKEN 9330162012 gene	ncRNA
common_peak2-23452-23-16-0.634304663258741-0.82304638657543	chr15	66560530	66561128	+	0	NA	intron (NM_009375, intron 26 of 47)	intron (NM_009375, intron 26 of 47)	58497	NM_009375	21819	Mm.441333	NM_009375	ENSMUSG00000053469	Tg	Tgn|cog	thyroglobulin	protein-coding
unique_peak1-2001-11-1-2.50869358425161-2.83420869758413	chr15	3236524	3237031	+	0	NA	intron (NM_001166063, intron 6 of 8)	ORR1D2-int|LTR|MaLR	15800	NM_009155	20363	Mm.392203	NM_009155	ENSMUSG00000064373	Sepp1	AU018766|D15Ucla1|Se-P|selp	selenoprotein P, plasma, 1	protein-coding
unique_peak2-34762-4-11--1.6084230145744-1.68134727924692	chr15	58134550	58135075	+	0	NA	Intergenic	RLTR11A2|LTR|ERVK	20912	NM_177755	268807	Mm.124498	NM_177755	ENSMUSG00000022357	Klhl38	8230402K04Rik	kelch-like 38	protein-coding
common_peak2-30111-8-10--0.454209200689727-1.078512453669	chr6	135351617	135352249	+	0	NA	Intergenic	L1_Mur3|LINE|L1	34422	NM_001288627	13730	Mm.182785	NM_010128	ENSMUSG00000030208	Emp1	I-8-09|TMP	epithelial membrane protein 1	protein-coding
common_peak2-29322-8-5-0.420259917226415-1.10484139239135	chr5	146703390	146703768	+	0	NA	Intergenic	L1Md_A|LINE|L1	-12149	NM_007818	13112	Mm.332844	NM_007818	ENSMUSG00000056035	Cyp3a11	AI256190|Cyp3a|IIIAm1|Pcn	cytochrome P450, family 3, subfamily a, polypeptide 11	protein-coding
common_peak2-27714-26-20-0.535581669379702-0.738267116931592	chr3	122458205	122458993	+	0	NA	intron (NM_153422, intron 2 of 20)	intron (NM_153422, intron 2 of 20)	26523	NM_153422	242202	Mm.134911	NM_153422	ENSMUSG00000053965	Pde5a	Cgbpde|Cn5n|Pde5|Pde5a1	phosphodiesterase 5A, cGMP-specific	protein-coding
common_peak1-8451-9-10--0.269818212233077-1.05503135781948	chr10	79852295	79852832	+	0	NA	Intergenic	B4A|SINE|B4	-2167	NM_198615	237400	Mm.268389	NM_198615	ENSMUSG00000048696	Mex3d	BC059858|Rkhd1	mex3 homolog D (C. elegans)	protein-coding
common_peak1-19260-17-27--0.589058583852566-0.604689589251113	chr9	111118037	111118669	+	0	NA	intron (NM_027742, intron 9 of 13)	intron (NM_027742, intron 9 of 13)	55759	NM_026810	17350	Mm.486383	NM_026810	ENSMUSG00000032498	Mlh1	1110035C23Rik|AI317206|AI325952|AI561766	mutL homolog 1 (E. coli)	protein-coding
common_peak2-22886-39-47-0.0307987461979975-0.310078451983505	chr14	31661182	31662478	+	0	NA	intron (NM_028839, intron 1 of 7)	MT2A|LTR|ERVL	23050	NM_028839	69179	Mm.143025	NM_028839	ENSMUSG00000006526	Tmem110	1810038N08Rik|2310014H19Rik|AW554125	transmembrane protein 110	protein-coding
common_peak1-10999-9-11--0.395349094316936-0.344532117358383	chr15	36819629	36820158	+	0	NA	Intergenic	Intergenic	-93209	NM_001253806	22631	Mm.3360	NM_011740	ENSMUSG00000022285	Ywhaz	1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	protein-coding
common_peak1-11079-15-9-0.690236655668294-0.732381977911291	chr15	59077379	59078143	+	0	NA	Intergenic	Intergenic	-60742	NR_045613	100416830	Mm.490788	NR_045613	ENSMUSG00000098528	Zfp572	4930472F24Rik	zinc finger protein 572	pseudo
common_peak2-19919-40-28-0.800994687623526-1.77636329975051	chr1	125678465	125679695	+	0	NA	intron (NM_199021, intron 3 of 25)	L1_Mus3|LINE|L1	263056	NM_199021	269109	Mm.483255	NM_199021	ENSMUSG00000036815	Dpp10	6430601K09Rik|DPP X|Dprp3	dipeptidylpeptidase 10	protein-coding
common_peak2-30593-14-21--0.560215458279653-0.519193887192484	chr7	80860891	80861503	+	0	NA	Intergenic	(TGGGGG)n|Simple_repeat|Simple_repeat	-23996	NM_001162532	100038347	Mm.425464	NM_001162532	ENSMUSG00000078670	Fam174b	-	family with sequence similarity 174, member B	protein-coding
unique_peak2-38528-1-6--2.43441193227435-1.56314192529759	chr7	45719096	45719465	+	0	NA	Intergenic	Intergenic	800624	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak1-8819-11-7-0.508693584251613-1.21681515183528	chr11	22719381	22719893	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	40098	NM_016888	53625	Mm.395495	NM_016888	ENSMUSG00000051650	B3gnt2	AA408337|AA409404|AW260308|B3Galt6|B3gnt1|BGnT-1|BGnT-2|BGnT1|BGnT2|Beta3gnt	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2	protein-coding
unique_peak1-6614-8-4-0.683294323060208-1.21878474469819	chr8	3621625	3622116	+	0	NA	promoter-TSS (NM_026156)	promoter-TSS (NM_026156)	319	NM_001195244	100503890	Mm.254898	NM_001195244	ENSMUSG00000087687	Pet100	2900053A13Rik	PET100 homolog (S. cerevisiae)	protein-coding
common_peak2-28344-6-8--0.60452689106201-1.03789460276074	chr4	135354058	135354424	+	0	NA	exon (NM_001085509, exon 25 of 37)	exon (NM_001085509, exon 25 of 37)	38611	NM_001085509	242702	Mm.318639	NM_001085509	ENSMUSG00000037139	Myom3	8430427K15Rik|Gm434	myomesin family, member 3	protein-coding
common_peak2-27740-16-19--0.203664452619301-0.325169893479371	chr3	126692950	126694151	+	0	NA	intron (NM_178655, intron 2 of 24)	B2_Mm2|SINE|B2	7820	NM_178655	109676	Mm.220242	NM_178655	ENSMUSG00000032826	Ank2	AI835472|AW491075|Ank-2	ankyrin 2, brain	protein-coding
common_peak1-17899-69-79-0.27321435237137-0.701478133004951	chr7	121033919	121035473	+	0	NA	intron (NM_145584, intron 5 of 15)	intron (NM_145584, intron 5 of 15)	125184	NM_145584	233744	Mm.334160	NM_145584	ENSMUSG00000038156	Spon1	AI666765|AW455831|BC020531|D330035F22Rik|FSP	spondin 1, (f-spondin) extracellular matrix protein	protein-coding
common_peak1-13521-70-89-0.128113820045724-0.395124771764859	chr2	137116679	137118151	+	0	NA	Intergenic	MIR|SINE|MIR	-175159	NM_013822	16449	Mm.22398	NM_013822	ENSMUSG00000027276	Jag1	ABE2|Gsfabe2|Htu|Ozz|Ser-1	jagged 1	protein-coding
common_peak2-22619-10-11--0.228547155712387-0.31137425193576	chr13	78163188	78163723	+	0	NA	promoter-TSS (NM_029315)	promoter-TSS (NM_029315)	-708	NM_029315	75507	Mm.443255	NM_029315	ENSMUSG00000093668	Pou5f2	1700013G10Rik|SPRM-1|Sprm1	POU domain class 5, transcription factor 2	protein-coding
common_peak1-13097-45-34-0.731075008399905-1.67641628704619	chr19	7417031	7418506	+	0	NA	Intergenic	ID_B1|SINE|B4	-1418	NM_001080388	13728	Mm.258986	NM_007928	ENSMUSG00000024969	Mark2	EMK-1|Emk|Par-1|Par-1b	MAP/microtubule affinity-regulating kinase 2	protein-coding
unique_peak2-38358-7-10--0.660340788339108-1.12966497611638	chr7	3694426	3695113	+	0	NA	intron (NM_001289428, intron 12 of 12)	(TTC)n|Simple_repeat|Simple_repeat	-22785	NM_011095	18733	Mm.326531	NM_011095		Pirb	Gp91|LIR-3|Lilrb3|PIR-B	paired Ig-like receptor B	protein-coding
common_peak2-30007-16-10-0.658832023630764-0.699649909729472	chr6	124903761	124904295	+	0	NA	Intergenic	B3A|SINE|B2	11387	NM_012003	26894	Mm.244536	NM_012003	ENSMUSG00000030127	Cops7a	D6Ertd35e	COP9 (constitutive photomorphogenic) homolog, subunit 7a (Arabidopsis thaliana)	protein-coding
unique_peak2-36521-4-9--1.34538860874061-1.36011389749466	chr2	163084404	163084766	+	0	NA	intron (NM_001098799, intron 2 of 8)	intron (NM_001098799, intron 2 of 8)	33395	NM_001098799	269389	Mm.207709	NM_001098799	ENSMUSG00000074607	Tox2	AI851523|AV026525|BI987407|Gcx1|RxHMG1	TOX high mobility group box family member 2	protein-coding
unique_peak2-37474-5-7--0.704380336005853-1.01466476204226	chr5	3323429	3323780	+	0	NA	Intergenic	Intergenic	-20708	NM_009873	12571	Mm.31672	NM_009873	ENSMUSG00000040274	Cdk6	5830411I20|AI504062|Crk2	cyclin-dependent kinase 6	protein-coding
unique_peak1-436-10-0-3.35641534500877-3.31132995230379	chr1	164794272	164794800	+	0	NA	intron (NM_010231, intron 1 of 8)	intron (NM_010231, intron 1 of 8)	2143	NM_010231	14261	Mm.976	NM_010231	ENSMUSG00000040181	Fmo1	-	flavin containing monooxygenase 1	protein-coding
common_peak2-20503-8-6-0.197867495889966-1.03789460276074	chr10	59577384	59577816	+	0	NA	intron (NM_052994, intron 1 of 10)	(GAA)n|Simple_repeat|Simple_repeat	8595	NM_052994	94214	Mm.153429	NM_052994	ENSMUSG00000058297	Spock2	AA407235|Gcap26|mKIAA0275	sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2	protein-coding
common_peak1-17110-41-68--0.407375751929509-0.765659882660433	chr6	113690637	113691839	+	0	NA	promoter-TSS (NM_024206)	promoter-TSS (NM_024206)	-563	NM_024206	110379	Mm.29296	NM_024206	ENSMUSG00000030298	Sec13	1110003H02Rik|Sec13l1|Sec13r	SEC13 homolog (S. cerevisiae)	protein-coding
unique_peak1-434-9-3-1.18961340640422-1.57096726280955	chr1	162450004	162450530	+	0	NA	intron (NM_013862, intron 13 of 20)	(T)n|Simple_repeat|Simple_repeat	57617	NM_001146330	620246	Mm.478780	NM_001146330		Gpr52	EG620246	G protein-coupled receptor 52	protein-coding
unique_peak1-6135-13-5-1.19350952991661-1.95509489018123	chr6	134983679	134984298	+	0	NA	Intergenic	Intergenic	22358	NM_026360	67755	Mm.166524	NM_026360	ENSMUSG00000030204	Ddx47	4930588A18Rik|C77285	DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	protein-coding
common_peak1-10314-11-16--0.578769256998726-0.503257505534083	chr13	67682913	67683542	+	0	NA	Intergenic	L1Md_F2|LINE|L1	27417	NM_001163246	100416706	Mm.478045	NM_001163246	ENSMUSG00000058093	AA987161	AA987127	expressed sequence AA987161	protein-coding
unique_peak1-3595-10-1-2.35641534500877-2.57096726280955	chr19	32174017	32174465	+	0	NA	intron (NM_018830, intron 2 of 23)	intron (NM_018830, intron 2 of 23)	3389	NM_018830	54447	Mm.491229	NM_018830	ENSMUSG00000024887	Asah2	AI585898	N-acylsphingosine amidohydrolase 2	protein-coding
unique_peak1-2749-18-5-1.7279566505072-2.39372960542229	chr17	48004520	48005476	+	0	NA	3' UTR (NM_028767, exon 17 of 17)	3' UTR (NM_028767, exon 17 of 17)	-33358	NM_001109973	17240	Mm.329100	NM_010783	ENSMUSG00000032717	Mdfi	I-mf|I-mfa	MyoD family inhibitor	protein-coding
unique_peak1-2698-10-4-1.03448725012141-1.5150158574804	chr16	87347967	87348489	+	0	NA	Intergenic	Intergenic	-6202	NM_001159331	67768	Mm.296532	NM_026366	ENSMUSG00000044442	N6amt1	5830445C04Rik|Hemk2|Pred28	N-6 adenine-specific DNA methyltransferase 1 (putative)	protein-coding
common_peak2-31408-16-12-0.417823924126969-0.489164546851866	chr8	92361523	92362204	+	0	NA	Intergenic	Intergenic	510288	NM_172913	244579	Mm.302755	NM_172913	ENSMUSG00000043668	Tox3	500-9|BC052044|C230068E13|CAGF9|Tnrc9	TOX high mobility group box family member 3	protein-coding
unique_peak2-34584-5-6--0.511735258063458-0.947717972411649	chr14	69337150	69337565	+	0	NA	Intergenic	Intergenic	-63458	NM_183366	13522	Mm.117450	NM_010082	ENSMUSG00000014725	Adam28	C130072N01Rik|D430033C21Rik|Dtgn1|MDC-L|MDC-Lm|MDC-Ls|MDCL|TECADAM|eMDCII	a disintegrin and metallopeptidase domain 28	protein-coding
common_peak1-16364-36-51--0.221118631973337-0.382513308492835	chr5	122501208	122502292	+	0	NA	Intergenic	Intergenic	-3916	NM_007804	13048	Mm.156172	NM_007804	ENSMUSG00000042589	Cux2	1700051K22Rik|Cutl2|Cux-2|ENSMUSG00000072641	cut-like homeobox 2	protein-coding
unique_peak2-36846-4-10--1.48289213249054-1.5150158574804	chr3	89233450	89233952	+	0	NA	promoter-TSS (NM_001293763)	promoter-TSS (NM_001293763)	-435	NM_001293768	68911	Mm.22521	NM_026869	ENSMUSG00000047824	Pygo2	1190004M21Rik	pygopus 2	protein-coding
unique_peak2-38342-3-6--1.22133801201688-1.08602067057793	chr7	109985585	109985999	+	0	NA	Intergenic	L1Md_T|LINE|L1	19993	NM_001011536	258168	Mm.377368	NM_001011536	ENSMUSG00000060888	Olfr566	GA_x5J8B7W5P47-379997-380552|MOR14-7P	olfactory receptor 566	protein-coding
common_peak1-17040-11-9-0.186765489364251-0.344532117358383	chr6	94225311	94225761	+	0	NA	intron (NM_001286784, intron 1 of 22)	L2a|LINE|L2	8375	NM_001286786	14924	Mm.217216	NM_010367	ENSMUSG00000045095	Magi1	AIP3|BAP1|Baiap1|Gukmi1|MAGI1c|Magi-1|TNRC19|WWP3|mKIAA4129	membrane associated guanylate kinase, WW and PDZ domain containing 1	protein-coding
common_peak2-23784-48-34-0.841644134289848-2.21281914625673	chr15	99473869	99475153	+	0	NA	intron (NM_012025, intron 1 of 17)	intron (NM_012025, intron 1 of 17)	7576	NM_001253808	26934	Mm.273804	NM_012025	ENSMUSG00000023015	Racgap1	AI227039|AI327394|Band25|GTPase|MgcRacGAP|gtl11|mKIAA1478	Rac GTPase-activating protein 1	protein-coding
unique_peak1-4279-12-3-1.64877598508764-2.36932189928148	chr2	137412625	137413207	+	0	NA	Intergenic	Intergenic	-470660	NM_013822	16449	Mm.22398	NM_013822	ENSMUSG00000027276	Jag1	ABE2|Gsfabe2|Htu|Ozz|Ser-1	jagged 1	protein-coding
common_peak1-9888-18-27--0.494435770829252-0.528262014464654	chr12	85338606	85339427	+	0	NA	Intergenic	Intergenic	10205	NM_134188	171210	Mm.371675	NM_134188	ENSMUSG00000021226	Acot2	AA571646|MTE-I|Mte1	acyl-CoA thioesterase 2	protein-coding
unique_peak2-38645-2-8--2.08737925770563-1.65811743852845	chr7	89940495	89941150	+	0	NA	Intergenic	ORR1B2-int|LTR|MaLR	-36668	NR_046004	77800	Mm.444811	NR_046004	ENSMUSG00000086690	4933406J10Rik	A930009F24Rik	RIKEN cDNA 4933406J10 gene	ncRNA
common_peak2-27331-4-8--1.19338551529556-1.21878474469819	chr3	69007180	69007522	+	0	NA	Intergenic	B1_Mur3|SINE|Alu	-18990	NM_027843	71619	Mm.98122	NM_027843	ENSMUSG00000098207	Arl14	9130014L17Rik|Arf7	ADP-ribosylation factor-like 14	protein-coding
unique_peak2-38489-3-14--2.3208736855678-2.58603100924543	chr7	34721748	34722471	+	0	NA	Intergenic	Intergenic	7895	NM_178308	110187	Mm.155750	NM_178308	ENSMUSG00000066586	Scgb2b26	Abpbg26|Abpbg4|Abpg|C2d|Scgb2b4	secretoglobin, family 2B, member 26	protein-coding
common_peak2-25294-42-69--0.386953689077782-0.699241046598679	chr18	70471742	70473108	+	0	NA	Intergenic	L1Md_T|LINE|L1	-68187	NM_029346	75577	Mm.58214	NM_029346	ENSMUSG00000024512	Dynap	2310002L13Rik	dynactin associated protein	protein-coding
common_peak2-22979-8-10--0.454209200689727-1.078512453669	chr14	55557289	55557844	+	0	NA	intron (NM_029390, intron 2 of 3)	intron (NM_029390, intron 2 of 3)	2232	NM_029390	67272	Mm.41614	NM_026066	ENSMUSG00000040759	Cmtm5	1500005P16Rik|2900052H21Rik|Cklfsf5	CKLF-like MARVEL transmembrane domain containing 5	protein-coding
common_peak2-20914-55-77--0.0807823477095466-0.313973398029927	chr11	5740419	5741517	+	0	NA	Intergenic	LTRIS2|LTR|ERV1	-2949	NM_017401	54125	Mm.260194	NM_017401	ENSMUSG00000020474	Polm	AI462166|B230309I03Rik|Tdt-N	polymerase (DNA directed), mu	protein-coding
common_peak1-18784-30-28-0.311694414364301-0.518746288394487	chr8	129233598	129234958	+	0	NA	Intergenic	Intergenic	-116942	NM_001164598	270110	Mm.334918	NM_001164598	ENSMUSG00000051495	Irf2bp2	E130305N23Rik|IRF-2BP2	interferon regulatory factor 2 binding protein 2	protein-coding
common_peak1-10346-13-11-0.193509529916613-0.379391706698377	chr13	78163312	78163993	+	0	NA	promoter-TSS (NM_029315)	promoter-TSS (NM_029315)	-511	NM_029315	75507	Mm.443255	NM_029315	ENSMUSG00000093668	Pou5f2	1700013G10Rik|SPRM-1|Sprm1	POU domain class 5, transcription factor 2	protein-coding
unique_peak1-4812-7-0-2.79909083029819-2.40823996531185	chr3	142332244	142332731	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	-31525	NM_173763	229905	Mm.289643	NM_173763	ENSMUSG00000040213	Ccbl2	KATIII|Kat3	cysteine conjugate-beta lyase 2	protein-coding
common_peak1-12085-21-46--0.985099586411402-1.82819694957564	chr17	24669545	24670439	+	0	NA	intron (NM_177375, intron 1 of 8)	intron (NM_177375, intron 1 of 8)	700	NM_177375	328778	Mm.266033	NM_177375	ENSMUSG00000079657	Rab26	A830020M03Rik	RAB26, member RAS oncogene family	protein-coding
common_peak2-21189-9-7-0.18961340640422-1.05908390183068	chr11	60223067	60223447	+	0	NA	intron (NM_145427, intron 1 of 7)	intron (NM_145427, intron 1 of 7)	7344	NM_145427	246782	Mm.41651	NM_145427	ENSMUSG00000042709	Atpaf2	ATP12|ATP12p	ATP synthase mitochondrial F1 complex assembly factor 2	protein-coding
unique_peak1-3727-8-5-0.420259917226415-1.10484139239135	chr19	46508817	46509289	+	0	NA	intron (NM_001025391, intron 3 of 11)	intron (NM_001025391, intron 3 of 11)	37667	NM_015752	24069	Mm.41210	NM_015752	ENSMUSG00000025231	Sufu	Su(fu)	suppressor of fused homolog (Drosophila)	protein-coding
unique_peak2-33659-7-13--1.00826409175941-0.697979855752659	chr11	100158848	100159469	+	0	NA	Intergenic	Intergenic	-22152	NM_011508	20918	Mm.13886	NM_011508	ENSMUSG00000035530	Eif1	Sui1-rs1	eukaryotic translation initiation factor 1	protein-coding
common_peak2-26507-17-38--1.06710588065721-1.70296806472143	chr2	86019526	86021116	+	0	NA	TTS (NM_146583)	TTS (NM_146583)	1945	NM_146583	18352	Mm.222842	NM_146583	ENSMUSG00000075199	Olfr52	IE6|MOR185-6|ORL446	olfactory receptor 52	protein-coding
unique_peak1-5628-9-0-3.18961340640422-3.01029995663981	chr6	13381000	13381614	+	0	NA	Intergenic	L1_Mus1|LINE|L1	17970	NR_038149	69413	Mm.177847	NR_038149		1700016P04Rik	-	RIKEN cDNA 1700016P04 gene	ncRNA
unique_peak1-4159-8-2-1.42025991722641-1.65811743852845	chr2	102986818	102987268	+	0	NA	Intergenic	Intergenic	73211	NM_019735	56369	Mm.24772	NM_019735	ENSMUSG00000010911	Apip	APIP2|CGI-29|Mmrp19	APAF1 interacting protein	protein-coding
common_peak2-30233-21-20-0.177171842487475-0.380101753845079	chr7	4658246	4659112	+	0	NA	3' UTR (NM_177887, exon 5 of 5)	3' UTR (NM_177887, exon 5 of 5)	16149	NM_001168572	381979	Mm.297064	NM_001003920	ENSMUSG00000035390	Brsk1	Gm1100|SAD-B|SADB	BR serine/threonine kinase 1	protein-coding
unique_peak1-5272-13-4-1.45654393575041-2.23384849113406	chr5	64788157	64788741	+	0	NA	Intergenic	Intergenic	70732	NR_040681	69999	Mm.261413	NR_040681		1700027F09Rik	-	RIKEN cDNA 1700027F09 gene	ncRNA
common_peak1-8113-14-7-0.899216160357645-0.947446088118041	chr1	183905467	183906113	+	0	NA	intron (NM_001083121, intron 1 of 13)	intron (NM_001083121, intron 1 of 13)	44321	NM_008680	13800	Mm.87759	NM_008680	ENSMUSG00000022995	Enah	Mena|NDPP-1|Ndpp1|WBP8	enabled homolog (Drosophila)	protein-coding
unique_peak2-33159-6-7--0.434601889619698-0.97990265578305	chr10	91183806	91184237	+	0	NA	Intergenic	MLT1D|LTR|MaLR	350909	NR_029812	723955		NR_029812	miRBase:MI0000715	Mir135a-2	Mirn135a-2	microRNA 135a-2	ncRNA
unique_peak1-2975-8-3-1.00522241794757-1.39487600375387	chr17	75180281	75180717	+	0	NA	intron (NM_152817, intron 12 of 19)	intron (NM_152817, intron 12 of 19)	63409	NM_152817	74196	Mm.209503	NM_152817	ENSMUSG00000024078	Ttc27	2610511O17Rik	tetratricopeptide repeat domain 27	protein-coding
common_peak2-21146-14-12-0.198776442216552-0.373562084705529	chr11	57518187	57518844	+	0	NA	intron (NM_134189, intron 1 of 11)	RMER19C|LTR|ERVK	59571	NM_134189	171212	Mm.271670	NM_134189	ENSMUSG00000020520	Galnt10	AU018154|C330012K04Rik|GalNAc-T10|GalNAc-T9|Galnt9|ppGaNTase	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10	protein-coding
common_peak2-25882-18-21--0.146512467408946-0.306326795069975	chr19	44266964	44267758	+	0	NA	promoter-TSS (NM_181422)	promoter-TSS (NM_181422)	-429	NM_181422	329064	Mm.308481	NM_181422	ENSMUSG00000037578	Pkd2l1	B830002B15|BC046386|PCL|PKD2L|Pkdl|TRPP3	polycystic kidney disease 2-like 1	protein-coding
common_peak1-19195-17-7-1.21829633820504-1.55050753388977	chr9	99725002	99725858	+	0	NA	Intergenic	Intergenic	51159	NM_011440	20669	Mm.261595	NM_011440	ENSMUSG00000053747	Sox14	-	SRY (sex determining region Y)-box 14	protein-coding
common_peak2-30953-8-8--0.164702583494742-1.00793137938329	chr8	70139684	70140157	+	0	NA	Intergenic	L1Md_A|LINE|L1	92167	NM_008674	17962	Mm.57193	NM_008674	ENSMUSG00000056426	Nat3	-	N-acetyltransferase 3	protein-coding
common_peak1-16896-71-56-0.81155416455523-3.03280148829625	chr6	72276665	72279505	+	0	NA	intron (NM_138592, intron 9 of 12)	ID_B1|SINE|B4	17084	NM_138592	28035	Mm.281900	NM_138592	ENSMUSG00000056305	Usp39	AA408960|AI894154|CGI-21|D6Wsu157e|SAD1	ubiquitin specific peptidase 39	protein-coding
unique_peak1-6674-10-5-0.771452844287613-1.33892459842472	chr8	22754351	22754881	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-11623	NM_001167790	23855	Mm.425519	NM_001167790	ENSMUSG00000060208	Defa17	AU014719|Cryp17|Defcr17	defensin, alpha, 17	protein-coding
unique_peak1-3647-12-3-1.64877598508764-2.36932189928148	chr19	38595754	38596374	+	0	NA	Intergenic	Intergenic	-2623	NM_019588	74055	Mm.34031	NM_019588	ENSMUSG00000024998	Plce1	4933403A21Rik|PLCepsilon|Plce|mKIAA1516	phospholipase C, epsilon 1	protein-coding
common_peak2-27446-42-95--0.842633172853972-2.78275088904917	chr3	90079572	90080905	+	0	NA	exon (NM_201407, exon 19 of 28)	exon (NM_201407, exon 19 of 28)	6167	NR_105979	102465612		NR_105979		Mir7012	mmu-mir-7012	microRNA mir-7012	ncRNA
common_peak2-21150-12-16--0.4386868561627-0.368541233333383	chr11	57801558	57802123	+	0	NA	Intergenic	Intergenic	-20726	NM_028451	73158	Mm.248843	NM_028451	ENSMUSG00000037331	Larp1	1810024J12Rik|3110040D16Rik|Larp|mKIAA0731	La ribonucleoprotein domain family, member 1	protein-coding
unique_peak1-3284-12-0-3.64877598508764-4.21441993929574	chr18	74475586	74476045	+	0	NA	intron (NR_029424, intron 7 of 8)	RMER17D2|LTR|ERVK	33061	NM_028948	74453	Mm.182293	NM_028948	ENSMUSG00000035394	Ccdc11	4933415I03Rik	coiled-coil domain containing 11	protein-coding
common_peak2-31789-18-31--0.687080848771648-0.820293215674341	chr9	32695459	32696808	+	0	NA	Intergenic	Intergenic	192506	NM_001038642	23871	Mm.292415	NM_011808	ENSMUSG00000032035	Ets1	AI196000|AI448617|D230050P06|Ets-1|Tpl1	E26 avian leukemia oncogene 1, 5' domain	protein-coding
common_peak1-8675-40-45-0.135413726694085-0.382513308492823	chr11	59505563	59506961	+	0	NA	intron (NM_012027, intron 1 of 23)	Lx9|LINE|L1	30265	NM_012027	26936	Mm.2402	NM_012027	ENSMUSG00000005417	Mprip	9530046C02|AA536749|AI647711|C76423|RIP3|Rhoip3|mKIAA0864|p116Rip	myosin phosphatase Rho interacting protein	protein-coding
common_peak1-14770-43-36-0.573109819894753-1.16883084967253	chr3	88511526	88513255	+	0	NA	intron (NM_028814, intron 10 of 13)	intron (NM_028814, intron 10 of 13)	-8386	NM_009069	19769	Mm.4009	NM_009069		Rit1	RIBB|ROC1|Rit	Ras-like without CAAX 1	protein-coding
common_peak2-22024-27-20-0.599228528116475-0.90781512069806	chr12	59095432	59096130	+	0	NA	Intergenic	Intergenic	-217010	NM_009216	20605	Mm.278336	NM_009216		Sstr1	SRIF-2|SS-1-R|SS1-R|SS1R|Smstr-1|Smstr1|sst1	somatostatin receptor 1	protein-coding
common_peak2-27351-17-26--0.53659116395843-0.538442145997695	chr3	79194181	79195051	+	0	NA	intron (NM_001142953, intron 1 of 4)	MTA_Mm-int|LTR|MaLR	45318	NM_001142953	100233207	Mm.373801	NM_001142953	ENSMUSG00000091685	Gm17359	-	predicted gene, 17359	protein-coding
common_peak1-8574-21-8-1.39956426382392-2.11898024768848	chr10	98683829	98684733	+	0	NA	Intergenic	Intergenic	-41584	NM_026268	67603	Mm.1791	NM_026268	ENSMUSG00000019960	Dusp6	1300019I03Rik|MKP-3|MKP3|PYST1	dual specificity phosphatase 6	protein-coding
unique_peak1-1229-6-3-0.565398110380302-1.08602067057793	chr11	110413638	110414102	+	0	NA	Intergenic	Lx7|LINE|L1	153434	NM_011943	26399	Mm.14487	NM_011943	ENSMUSG00000020623	Map2k6	MEK6|MKK6|Prkmk6|SAPKK3	mitogen-activated protein kinase kinase 6	protein-coding
unique_peak2-33251-3-13--2.22133801201688-2.36932189928148	chr10	127621243	127621680	+	0	NA	Intergenic	B3A|SINE|B2	-4108	NM_001039080	56516	Mm.42247	NM_019711	ENSMUSG00000040043	Rbms2	2610315E04Rik|Scr3	RNA binding motif, single stranded interacting protein 2	protein-coding
unique_peak1-3404-6-4-0.24347001549294-0.989110657569874	chr19	4711885	4712411	+	0	NA	intron (NM_021287, intron 1 of 36)	CpG	925	NM_021287	20743	Mm.329668	NM_021287	ENSMUSG00000067889	Sptbn2	Spnb3|mKIAA0302	spectrin beta, non-erythrocytic 2	protein-coding
common_peak1-18442-46-49-0.254139753474077-0.542494191925743	chr8	81015096	81015999	+	0	NA	Intergenic	Intergenic	17280	NM_001252089	19656	Mm.24718	NM_009033	ENSMUSG00000037070	Rbmxl1	Hnrpg|Rbmx|Rbmxrt	RNA binding motif protein, X linked-like-1	protein-coding
unique_peak1-1727-9-0-3.18961340640422-3.01029995663981	chr13	98651834	98652354	+	0	NA	Intergenic	Intergenic	322139	NR_046157	328314	Mm.138047	NR_046157		Gm5086	B230311A21|EG328314	predicted gene 5086	ncRNA
common_peak1-9909-34-44--0.109784569328409-0.311130777923626	chr12	86946393	86947505	+	0	NA	intron (NM_001205053, intron 1 of 3)	MIRb|SINE|MIR	5981	NM_001205053	81703	Mm.103560	NM_030887	ENSMUSG00000034271	Jdp2	Jundm2|Jundp2|TIF	Jun dimerization protein 2	protein-coding
common_peak2-20900-26-20-0.535581669379702-0.738267116931592	chr11	4266538	4267251	+	0	NA	intron (NM_029458, intron 10 of 10)	MLT1D|LTR|MaLR	74191	NM_029458	75828	Mm.159592	NM_029458	ENSMUSG00000020419	Hormad2	4930529M09Rik	HORMA domain containing 2	protein-coding
unique_peak1-1434-8-1-2.00522241794757-2.05605744720049	chr12	91305109	91305610	+	0	NA	intron (NM_172544, intron 15 of 19)	L1_Mus4|LINE|L1	254436	NM_001252074	18191	Mm.425766	NM_172544	ENSMUSG00000066392	Nrxn3	-	neurexin III	protein-coding
common_peak1-12966-17-8-1.04837133676273-1.30305656033811	chr19	3642246	3643199	+	0	NA	intron (NM_008513, intron 5 of 22)	intron (NM_008513, intron 5 of 22)	43842	NM_008513	16973	Mm.274581	NM_008513	ENSMUSG00000024913	Lrp5	BMND1|HBM|LR3|LRP7|OPPG|mKIAA4142	low density lipoprotein receptor-related protein 5	protein-coding
common_peak1-17948-55-59-0.297729275544183-0.669167117329832	chr7	127776539	127777746	+	0	NA	Intergenic	Lx3C|LINE|L1	-1561	NM_025899	67003	Mm.334206	NM_025899	ENSMUSG00000030884	Uqcrc2	1500004O06Rik	ubiquinol cytochrome c reductase core protein 2	protein-coding
unique_peak1-5577-24-3-2.79320990276772-5.35253599412607	chr5	149078908	149079861	+	0	NA	intron (NM_029920, intron 7 of 14)	intron (NM_029920, intron 7 of 14)	132096	NM_007513	11987	Mm.275489	NM_007513	ENSMUSG00000041313	Slc7a1	4831426K01Rik|AI447493|Atrc-1|Atrc1|Cat1|Rec-1|Rev-1|mCAT-1	solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	protein-coding
common_peak1-8676-24-13-0.985854980710112-1.52081014994907	chr11	70647246	70648308	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-10486	NM_001291143	54189	Mm.7087	NM_019400	ENSMUSG00000020817	Rabep1	Rab5ep|rabaptin-5|rabaptin-5alpha	rabaptin, RAB GTPase binding effector protein 1	protein-coding
common_peak2-29044-14-15--0.100783839642355-0.301029995663982	chr5	115134402	115134988	+	0	NA	intron (NM_019821, intron 1 of 4)	intron (NM_019821, intron 1 of 4)	6249	NM_019821	56356	Mm.275766	NM_019821	ENSMUSG00000011884	Gltp	1110001F24Rik|C76925|C77564	glycolipid transfer protein	protein-coding
common_peak1-7518-13-11-0.193509529916613-0.379391706698377	chr1	23202215	23202797	+	0	NA	Intergenic	(TAGA)n|Simple_repeat|Simple_repeat	-76602	NR_029533	387225		NR_029533	miRBase:MI0000144	Mir30a	Mirn30a|mmu-mir-30a	microRNA 30a	ncRNA
common_peak1-11021-23-9-1.39983940962172-2.17218792383888	chr15	38468194	38469155	+	0	NA	Intergenic	Intergenic	-19653	NM_018745	54375	Mm.250214	NM_018745	ENSMUSG00000037458	Azin1	1700085L02Rik|AI414949|Oazi|Oazin	antizyme inhibitor 1	protein-coding
common_peak1-18932-10-6-0.549060422951165-1.21398586181642	chr9	45838648	45839110	+	0	NA	intron (NM_027498, intron 1 of 24)	intron (NM_027498, intron 1 of 24)	17976	NM_027498	70661	Mm.219459	NM_027498	ENSMUSG00000034135	Sik3	5730525O22Rik|9030204A07Rik|AI447252|AI846254|AI849445|Qsk|SIK-3|mKIAA0999	SIK family kinase 3	protein-coding
common_peak2-22604-12-11-0.0638134843664826-0.337263207250336	chr13	74316935	74317227	+	0	NA	intron (NM_177333, intron 10 of 12)	Lx2|LINE|L1	29067	NM_177333	211446	Mm.261859	NM_177333	ENSMUSG00000034152	Exoc3	2810050O03Rik|E430013E20Rik|Sec6|Sec6l1	exocyst complex component 3	protein-coding
unique_peak1-667-8-3-1.00522241794757-1.39487600375387	chr10	60928617	60929129	+	0	NA	Intergenic	Intergenic	-9708	NM_153542	216011	Mm.136116	NM_153542	ENSMUSG00000037151	Lrrc20	BC036304	leucine rich repeat containing 20	protein-coding
unique_peak1-4483-20-2-2.90311228387004-4.53603905993749	chr3	65830525	65831485	+	0	NA	Intergenic	B4A|SINE|B4	-68858	NM_019937	56706	Mm.175612	NM_019937	ENSMUSG00000027829	Ccnl1	2610030E23Rik|AU018493|Ccnl|ania-6a	cyclin L1	protein-coding
unique_peak1-6414-18-4-1.99099105634099-2.82951996911245	chr7	83852339	83853157	+	0	NA	intron (NM_001199224, intron 19 of 22)	L1Md_A|LINE|L1	477975	NM_001199224	244071	Mm.322829	NM_172902	ENSMUSG00000025754	Agbl1	Ccp4|D430020F16|EG244071|Nna1-l1	ATP/GTP binding protein-like 1	protein-coding
common_peak1-17737-9-12--0.510826311736872-0.394412252720706	chr7	80802619	80803118	+	0	NA	Intergenic	Intergenic	28581	NR_033604	244061	Mm.484605	NR_033604		Gm4971	EG244061	Smad nuclear interacting protein 1 pseudogene	pseudo
unique_peak1-486-12-4-1.32684789020028-2.04196296489515	chr1	177740644	177741367	+	0	NA	intron (NM_029453, intron 26 of 27)	intron (NM_029453, intron 26 of 27)	-69904	NM_012012	26909	Mm.283046	NM_012012	ENSMUSG00000039748	Exo1	5730442G03Rik|Msa	exonuclease 1	protein-coding
common_peak1-7825-24-14-0.886319307159198-1.33403699391683	chr1	127231705	127232849	+	0	NA	Intergenic	B3|SINE|B2	100027	NM_023735	74117	Mm.183102	NM_023735	ENSMUSG00000026341	Actr3	1200003A09Rik|Arp3	ARP3 actin-related protein 3	protein-coding
common_peak1-10079-19-33--0.684775514588653-0.884951936461256	chr13	23561503	23562467	+	0	NA	Intergenic	Intergenic	-4215	NM_013483	12231	Mm.1420	NM_013483	ENSMUSG00000000706	Btn1a1	Btn	butyrophilin, subfamily 1, member A1	protein-coding
unique_peak2-36486-3-6--1.22133801201688-1.08602067057793	chr2	152693527	152693897	+	0	NA	intron (NM_001141977, intron 3 of 17)	B2_Mm2|SINE|B2	2909	NR_049195	100885834		NR_049195	miRBase:MI0019190	Mir5622	mmu-mir-5622	microRNA mir-5622	ncRNA
common_peak1-16168-46-33-0.810533101998463-2.02794041588715	chr5	88675126	88676398	+	0	NA	Intergenic	L1Md_A|LINE|L1	-22182	NM_001110779	665615	Mm.366701	NM_001110779	ENSMUSG00000090302	Gm7714	EG665615	predicted gene 7714	protein-coding
unique_peak1-2896-10-1-2.35641534500877-2.57096726280955	chr17	45596694	45597208	+	0	NA	intron (NM_027649, intron 3 of 7)	(TCTCTG)n|Simple_repeat|Simple_repeat	14936	NM_027649	71020	Mm.44257	NM_027649	ENSMUSG00000023935	Spats1	1700011H05Rik|4933400B06Rik|Daip2|Ddip|Srsp1	spermatogenesis associated, serine-rich 1	protein-coding
common_peak2-19549-24-28--0.0647710923598552-0.301029995663979	chr1	180813685	180814646	+	0	NA	exon (NM_001161665, exon 10 of 15)	exon (NM_001161665, exon 10 of 15)	354909	NM_001161665	269152	Mm.129727	NM_177724	ENSMUSG00000026494	Kif26b	4832420M10|BC056349|D230039L06Rik	kinesin family member 26B	protein-coding
common_peak1-17769-20-23--0.0968877161299631-0.305855887145851	chr7	92560709	92561715	+	0	NA	intron (NM_001105182, intron 1 of 5)	intron (NM_001105182, intron 1 of 5)	2974	NM_001105182	330581	Mm.469909	NM_001105182	ENSMUSG00000091006	Vmn2r69	-	vomeronasal 2, receptor 69	protein-coding
unique_peak2-39386-2-10--2.37688587490062-2.09384600808989	chr9	21729159	21729571	+	0	NA	intron (NR_045606, intron 3 of 4)	ID_B1|SINE|B4	2367	NM_001253869	235043	Mm.253329	NM_178577	ENSMUSG00000040883	Tmem205	-	transmembrane protein 205	protein-coding
unique_peak1-3542-10-3-1.35641534500877-1.75805390616669	chr19	23151342	23151866	+	0	NA	Intergenic	Intergenic	-64112	NM_010638	16601	Mm.291595	NM_010638	ENSMUSG00000033863	Klf9	2310051E17Rik|AA589643|BTEB-1|Bteb1|ENSMUSG00000055440|Gm9971	Kruppel-like factor 9	protein-coding
common_peak2-20124-18-15-0.312919151228352-0.456667090758524	chr1	164135212	164136000	+	0	NA	intron (NM_172646, intron 14 of 19)	GA-rich|Low_complexity|Low_complexity	-12148	NR_002870	474332	Mm.479755	NR_002870	ENSMUSG00000078190	Dnm3os	6030416H16Rik|Hag2|Npn1|P/L01	dynamin 3, opposite strand	ncRNA
unique_peak1-103-10-3-1.35641534500877-1.75805390616669	chr1	53838073	53838558	+	0	NA	intron (NM_133810, intron 1 of 7)	L2b|LINE|L2	3744	NM_133810	98267	Mm.25559	NM_133810	ENSMUSG00000026094	Stk17b	3110009A03Rik|AI120141|Drak2	serine/threonine kinase 17b (apoptosis-inducing)	protein-coding
common_peak1-11047-22-42--0.778980649614693-1.24799833770813	chr15	52712135	52712896	+	0	NA	Intergenic	L1Md_A|LINE|L1	168515	NM_027212	69790	Mm.195562	NM_027212	ENSMUSG00000038622	Med30	1810038N03Rik|2510044J04Rik|TRAP25|Thrap6	mediator complex subunit 30	protein-coding
common_peak2-27543-21-20-0.177171842487475-0.380101753845079	chr3	96196946	96197762	+	0	NA	Intergenic	Intergenic	21402	NR_001579	21748		NR_001579	ENSMUSG00000064796	Terc	mTER|mTR	telomerase RNA component	ncRNA
unique_peak1-2750-7-0-2.79909083029819-2.40823996531185	chr17	70188961	70189460	+	0	NA	Intergenic	Intergenic	400544	NM_001145192	320722	Mm.400254	NM_001145192	ENSMUSG00000091636	A330050F15Rik	-	RIKEN cDNA A330050F15 gene	protein-coding
unique_peak1-3194-10-6-0.549060422951165-1.21398586181642	chr18	53802426	53802958	+	0	NA	Intergenic	Intergenic	-5113	NR_040349	100502945	Mm.376937	NR_040349		Gm19466	-	predicted gene, 19466	ncRNA
common_peak2-24743-14-31--1.10078383964236-1.53513093355237	chr17	48738018	48738821	+	0	NA	Intergenic	B3|SINE|B2	144193	NM_152823	76589	Mm.311629	NM_152823	ENSMUSG00000043592	Unc5cl	2510009H09Rik|BB155270|Zud	unc-5 homolog C (C. elegans)-like	protein-coding
common_peak2-20758-13-15--0.221527969362231-0.308519316180257	chr10	115816062	115816661	+	0	NA	intron (NM_029928, intron 30 of 31)	intron (NM_029928, intron 30 of 31)	-38816	NR_028107	67342	Mm.245800	NM_026098	ENSMUSG00000020164	Kcnmb4os1	1700058G18Rik	potassium large conductance calcium-activated channel, subfamily M, beta member 4, opposite strand 1	ncRNA
common_peak1-8906-82-161--0.44658685857889-1.67423445259633	chr11	50291125	50292668	+	0	NA	Intergenic	B4A|SINE|B4	-47283	NM_172557	216724	Mm.390400	NM_172557	ENSMUSG00000020375	Rufy1	3000002E04Rik|Rabip4|ZFYVE12	RUN and FYVE domain containing 1	protein-coding
unique_peak1-6244-7-2-1.21412832957703-1.45399745587252	chr7	19230105	19230606	+	0	NA	Intergenic	L1Md_F|LINE|L1	11719	NM_027403	72242	Mm.326858	NM_027403	ENSMUSG00000070796	Psg21	1600019C01Rik|1600025N01Rik|1600026N13Rik|cea8	pregnancy-specific glycoprotein 21	protein-coding
unique_peak2-39628-0-6--3.64748585253182-1.56314192529759	chr9	97017955	97018394	+	0	NA	Intergenic	(CTG)n|Simple_repeat|Simple_repeat	-6714	NM_138756	192287	Mm.228067	NM_138756	ENSMUSG00000032449	Slc25a36	C330005L02Rik	solute carrier family 25, member 36	protein-coding
common_peak2-24796-24-23-0.208247402046561-0.407645899519042	chr17	65950633	65951174	+	0	NA	intron (NM_013933, intron 1 of 5)	B1F|SINE|Alu	11992	NM_013933	30960	Mm.266767	NM_013933	ENSMUSG00000024091	Vapa	33kDa|VAP33	vesicle-associated membrane protein, associated protein A	protein-coding
unique_peak1-6804-12-3-1.64877598508764-2.36932189928148	chr8	71313993	71314676	+	0	NA	Intergenic	RLTR1C|LTR|ERV1	-3494	NM_001293791	70885	Mm.252421	NM_027590	ENSMUSG00000031864	Ints10	4921521J11Rik|AI462004	integrator complex subunit 10	protein-coding
common_peak1-16231-28-27-0.245604197763859-0.431536360747188	chr5	100673562	100674544	+	0	NA	Intergenic	Intergenic	34342	NR_040679	69571	Mm.396412	NR_040679		2310034O05Rik	-	RIKEN cDNA 2310034O05 gene	ncRNA
common_peak2-28139-27-48--0.623163893219973-1.00060938969219	chr4	98382693	98383470	+	0	NA	intron (NM_007704, intron 17 of 17)	B1_Mus1|SINE|Alu	-10364	NM_001081202	381591	Mm.34340	NM_001081202	ENSMUSG00000087166	L1td1	AA546746|AB211064|D76865|ECAT11	LINE-1 type transposase domain containing 1	protein-coding
common_peak1-10938-44-100--0.836318648183259-2.89136065999139	chr15	12204784	12205891	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	-45914	NM_025673	66629	Mm.157655	NM_025673	ENSMUSG00000022200	Golph3	4733401N08Rik|5730410D03Rik|AW413496	golgi phosphoprotein 3	protein-coding
common_peak2-24353-64-136--0.632585681251923-2.55195960510772	chr17	6106163	6107752	+	0	NA	5' UTR (NM_001103181, exon 1 of 14)	5' UTR (NM_001103181, exon 1 of 14)	127	NM_001103181	68842	Mm.449307	NM_054040	ENSMUSG00000034377	Tulp4	1110057P05Rik|2210038L17Rik|Tusp	tubby like protein 4	protein-coding
common_peak1-15455-19-23--0.18227517405947-0.320777457303847	chr4	98400465	98401446	+	0	NA	intron (NM_001081202, intron 3 of 4)	B1_Mus1|SINE|Alu	7510	NM_001081202	381591	Mm.34340	NM_001081202	ENSMUSG00000087166	L1td1	AA546746|AB211064|D76865|ECAT11	LINE-1 type transposase domain containing 1	protein-coding
unique_peak1-4429-14-1-2.89921616035764-3.91338994363176	chr2	168105764	168106517	+	0	NA	Intergenic	Intergenic	-11309	NM_001081134	241794	Mm.425102	NM_001081134	ENSMUSG00000074575	Kcng1	AW536275|OTTMUSG00000016048	potassium voltage-gated channel, subfamily G, member 1	protein-coding
common_peak2-30896-28-16-0.965496278571123-1.60877160026697	chr7	142433636	142434290	+	0	NA	Intergenic	Intergenic	-26339	NM_001163611	100043254	Mm.192092	NM_001163611	ENSMUSG00000073804	Nps	ENSMUSG00000073804	neuropeptide S	protein-coding
common_peak2-22030-36-41-0.0870036633889937-0.341444061219173	chr12	65073302	65074471	+	0	NA	Intergenic	Intergenic	501999	NM_001163271	623046	Mm.189552	NM_001163271	ENSMUSG00000043060	Fscb	EG623046	fibrous sheath CABYR binding protein	protein-coding
unique_peak2-39216-4-9--1.34538860874061-1.36011389749466	chr8	107502257	107502774	+	0	NA	Intergenic	Intergenic	16897	NM_197999	72361	Mm.26580	NM_197999	ENSMUSG00000031877	Ces2g	2210023G05Rik|Ces2l	carboxylesterase 2G	protein-coding
unique_peak2-35663-5-7--0.704380336005853-1.01466476204226	chr18	6241921	6242237	+	0	NA	promoter-TSS (NM_008448)	promoter-TSS (NM_008448)	-557	NM_008448	16573	Mm.223744	NM_008448	ENSMUSG00000006740	Kif5b	AL022807|Khc|Khcs|Kns1|Ukhc	kinesin family member 5B	protein-coding
common_peak1-8125-7-10--0.660340788339108-1.12966497611638	chr1	186582067	186582581	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-25952	NM_008250	15284	Mm.1347	NM_008250	ENSMUSG00000039377	Hlx	Hlx1	H2.0-like homeobox	protein-coding
unique_peak2-35290-5-11--1.28934283672701-1.477227296591	chr17	6978832	6979430	+	0	NA	intron (NM_009510, intron 1 of 12)	intron (NM_009510, intron 1 of 12)	7998	NM_009510	22350	Mm.277812	NM_009510	ENSMUSG00000052397	Ezr	AW146364|R75297|Vil2|p81	ezrin	protein-coding
common_peak2-29117-67-83-0.152094060004234-0.424475579964465	chr5	123683452	123684967	+	0	NA	intron (NM_026000, intron 1 of 5)	intron (NM_026000, intron 1 of 5)	6010	NM_026000	67151	Mm.278997	NM_026000	ENSMUSG00000029440	Psmd9	1500011J20Rik|2610202L11Rik|Bridge-1|P27	proteasome (prosome, macropain) 26S subunit, non-ATPase, 9	protein-coding
common_peak2-28959-45-65--0.184036094013582-0.387582563723712	chr5	100845706	100847165	+	0	NA	Intergenic	Intergenic	-1182	NM_026969	69162	Mm.18634	NM_026969	ENSMUSG00000035325	Sec31a	1810024J13Rik|ABP125|ABP130|AU042160|HSPC275|Sec31l1	Sec31 homolog A (S. cerevisiae)	protein-coding
common_peak1-19212-19-22--0.120874629395327-0.306080386793804	chr9	105495020	105495822	+	0	NA	Intergenic	Intergenic	-49904	NM_001081309	75669	Mm.274830	NM_029380	ENSMUSG00000032571	Pik3r4	2210010O15Rik|C730038E05Rik|C85833|D9Ertd418e	phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 4, p150	protein-coding
unique_peak1-2829-13-1-2.77847203063777-3.64038867156802	chr17	27160790	27161352	+	0	NA	intron (NM_007523, intron 2 of 5)	RMER4B|LTR|ERVK	4500	NM_007523	12018	Mm.2443	NM_007523	ENSMUSG00000057789	Bak1	Bak|N-BAK1|N-Bak	BCL2-antagonist/killer 1	protein-coding
unique_peak2-35171-5-7--0.704380336005853-1.01466476204226	chr16	36041277	36041668	+	0	NA	5' UTR (NM_027113, exon 1 of 1)	5' UTR (NM_027113, exon 1 of 1)	196	NM_027113	69544	Mm.37802	NM_027113	ENSMUSG00000034379	Wdr5b	2310009C03Rik|AI606931	WD repeat domain 5B	protein-coding
unique_peak2-39796-1-4--1.94898510510411-1.10720996964787	chrX	16619758	16620079	+	0	NA	Intergenic	Intergenic	-131028	NM_010883	17986	Mm.5014	NM_010883	ENSMUSG00000040138	Ndp	ND|Ndph	Norrie disease (pseudoglioma) (human)	protein-coding
unique_peak1-6288-10-4-1.03448725012141-1.5150158574804	chr7	28960376	28960871	+	0	NA	intron (NM_007991, intron 4 of 8)	intron (NM_007991, intron 4 of 8)	-3879	NM_001037957	13549	Mm.57249	NM_010092	ENSMUSG00000002409	Dyrk1b	Mirk	dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b	protein-coding
unique_peak2-37926-10-20--1.03590207776999-1.03889213727317	chr5	145204423	145204951	+	0	NA	Intergenic	ORR1A4|LTR|MaLR	85293	NR_102373	100579137		NR_102372		Dmr	-	Dmrt1 related	ncRNA
common_peak2-27636-30-15-1.16967540949187-2.23573970698983	chr3	106788001	106788862	+	0	NA	Intergenic	Intergenic	-50649	NM_008418	16491	Mm.30640	NM_008418	ENSMUSG00000047959	Kcna3	Kca1-3|Kv1.3|Mk-3	potassium voltage-gated channel, shaker-related subfamily, member 3	protein-coding
unique_peak1-5851-33-9-2.00940946763817-4.90247409987431	chr6	83014130	83015174	+	0	NA	intron (NM_033606, intron 9 of 11)	intron (NM_033606, intron 9 of 11)	5567	NM_009392	21909	Mm.37	NM_009392	ENSMUSG00000068327	Tlx2	Enx|Hox11L.1|Hox11l1|NCX|Ncx1|Tlx1l1|Tlx1l2	T cell leukemia, homeobox 2	protein-coding
common_peak2-31794-5-7--0.704380336005853-1.01466476204226	chr9	35116282	35116647	+	0	NA	Intergenic	Intergenic	27774	NR_040715	71133	Mm.158577	NR_040715		4933422A05Rik	-	RIKEN cDNA 4933422A05 gene	ncRNA
common_peak1-8513-23-30--0.232428805877794-0.363124929330844	chr10	83543693	83544737	+	0	NA	Intergenic	Intergenic	358605	NM_001145198	69784	Mm.271188	NM_001145198	ENSMUSG00000087651	1500009L16Rik	2700050C19Rik|OCC-1	RIKEN cDNA 1500009L16 gene	protein-coding
unique_peak1-523-10-2-1.77145284428761-2.09384600808989	chr1	184041924	184042470	+	0	NA	Intergenic	Intergenic	-12671	NM_012058	27058	Mm.303071	NM_012058	ENSMUSG00000026511	Srp9	9kDa	signal recognition particle 9	protein-coding
unique_peak2-33821-6-7--0.434601889619698-0.97990265578305	chr12	4198347	4198770	+	0	NA	intron (NM_001159536, intron 8 of 21)	B1F1|SINE|Alu	-35469	NM_001204912	69709	Mm.250552	NM_001204912	ENSMUSG00000096199	Ptrhd1	2410017P09Rik	peptidyl-tRNA hydrolase domain containing 1	protein-coding
unique_peak1-2627-22-4-2.32535601020004-3.9780981129625	chr16	39668020	39668904	+	0	NA	Intergenic	Intergenic	766004	NM_170599	207683	Mm.245564	NM_170599	ENSMUSG00000022790	Igsf11	1700025L02Rik|BT-IgSF|Igsf13	immunoglobulin superfamily, member 11	protein-coding
common_peak1-11422-61-50-0.710323987777845-2.09773305436615	chr15	99584616	99587204	+	0	NA	intron (NM_028015, intron 1 of 9)	Charlie1b|DNA|MER1_type	17036	NM_028015	71949	Mm.390821	NM_028015		Cers5	2310081H14Rik|AU045339|AW544927|Lass5|Trh4	ceramide synthase 5	protein-coding
common_peak1-14381-48-49-0.32707096146009-0.682033507942397	chr2	168114774	168116006	+	0	NA	Intergenic	Intergenic	-20559	NM_001081134	241794	Mm.425102	NM_001081134	ENSMUSG00000074575	Kcng1	AW536275|OTTMUSG00000016048	potassium voltage-gated channel, subfamily G, member 1	protein-coding
common_peak2-24651-26-42--0.498365662543636-0.737357778720989	chr17	35556958	35557953	+	0	NA	Intergenic	Intergenic	-4337	NM_023124	15019	Mm.486287	NM_023124		H2-Q8	H-2Q8|MMS10-T|Ms10t|Qa-2|Qa-8|Qa8	histocompatibility 2, Q region locus 8	protein-coding
common_peak1-10053-16-10-0.658832023630764-0.699649909729472	chr13	20163760	20164622	+	0	NA	Intergenic	Intergenic	-18185	NM_080288	140580	Mm.342392	NM_080288	ENSMUSG00000041112	Elmo1	6330578D22Rik|C230095H21Rik|CED-12	engulfment and cell motility 1	protein-coding
unique_peak2-37855-14-30--1.05498015002923-1.40782320807776	chr5	135961366	135962411	+	0	NA	intron (NM_146001, intron 1 of 30)	PB1D9|SINE|Alu	59104	NM_146001	215114	Mm.280805	NM_146001	ENSMUSG00000039959	Hip1	2610109B09Rik|A930014B11Rik|E130315I21Rik|mKIAA4113	huntingtin interacting protein 1	protein-coding
unique_peak1-4972-12-5-1.06381348436648-1.78669045979184	chr4	107177518	107177997	+	0	NA	intron (NM_147221, intron 2 of 10)	G-rich|Low_complexity|Low_complexity	70433	NM_147221	230587	Mm.331757	NM_147221	ENSMUSG00000034762	Glis1	Gli5|Gli6|GliH1	GLIS family zinc finger 1	protein-coding
unique_peak2-37919-7-8--0.370834171144123-1.00793137938329	chr5	144918172	144918715	+	0	NA	intron (NM_001081109, intron 7 of 13)	intron (NM_001081109, intron 7 of 13)	-32712	NM_010800	17341	Mm.386767	NM_010800	ENSMUSG00000052271	Bhlha15	1810009C13Rik|Bhlhb8|MIST-1|Mist1	basic helix-loop-helix family, member a15	protein-coding
unique_peak1-5564-23-10-1.26233588587178-1.90052685918624	chr5	146907096	146908226	+	0	NA	intron (NM_001105160, intron 5 of 12)	RMER6D|LTR|ERVK	16827	NM_001105160	100041449	Mm.301900	NM_001105160	ENSMUSG00000061292	Cyp3a59	ENSMUSG00000061292	cytochrome P450, family 3, subfamily a, polypeptide 59	protein-coding
common_peak1-14839-16-22--0.405298313788951-0.440610794044987	chr3	94564984	94565614	+	0	NA	exon (NM_001293727, exon 21 of 21)	exon (NM_001293727, exon 21 of 21)	25138	NM_001293727	70737	Mm.87634	NM_001037711	ENSMUSG00000068876	Cgn	6330408J11Rik	cingulin	protein-coding
common_peak2-27890-47-23-1.34987892404539-4.17294976630178	chr4	136134591	136135652	+	0	NA	intron (NM_133872, intron 2 of 18)	intron (NM_133872, intron 2 of 18)	23517	NM_133872	99982	Mm.28540	NM_133872	ENSMUSG00000036940	Kdm1a	1810043O07Rik|AA408884|Aof2|D4Ertd478e|Kdm1|Lsd1|mKIAA0601	lysine (K)-specific demethylase 1A	protein-coding
unique_peak2-33453-3-6--1.22133801201688-1.08602067057793	chr11	64496003	64496383	+	0	NA	Intergenic	Intergenic	-246017	NR_028445	654805	Mm.436132	NR_028445		F930015N05Rik	-	RIKEN cDNA F930015N05 gene	ncRNA
common_peak1-14816-12-20--0.743541437691122-0.625923329873571	chr3	90526941	90527621	+	0	NA	Intergenic	Intergenic	-3547	NM_001165968	384997	Mm.316644	NM_207263	ENSMUSG00000042250	Pglyrp4	Gm1478|Gm413	peptidoglycan recognition protein 4	protein-coding
common_peak2-23371-11-8-0.338768582809301-1.14218153353838	chr15	55112532	55112955	+	0	NA	Intergenic	Intergenic	-26562	NM_181277	12818	Mm.297859	NM_181277	ENSMUSG00000022371	Col14a1	5730412L22Rik|AW108078	collagen, type XIV, alpha 1	protein-coding
common_peak1-17396-8-8--0.164702583494742-1.00793137938329	chr7	3289794	3290300	+	0	NA	promoter-TSS (NM_001093765)	promoter-TSS (NM_001093765)	-509	NM_016969	50918	Mm.29874	NM_016969	ENSMUSG00000068566	Myadm	D7Wsu62e	myeloid-associated differentiation marker	protein-coding
unique_peak1-2584-10-0-3.35641534500877-3.31132995230379	chr16	30788949	30789467	+	0	NA	Intergenic	Intergenic	189399	NM_177632	224093	Mm.28244	NM_177632	ENSMUSG00000046546	Fam43a	Tuf1	family with sequence similarity 43, member A	protein-coding
common_peak1-10424-14-12-0.198776442216552-0.373562084705529	chr13	100491929	100492583	+	0	NA	Intergenic	Intergenic	178382	NM_013732	27220	Mm.75498	NM_013732	ENSMUSG00000021647	Cartpt	Cart	CART prepropeptide	protein-coding
common_peak2-26282-9-5-0.604650905683064-1.21398586181642	chr2	30827853	30828224	+	0	NA	TTS (NM_144885)	TTS (NM_144885)	-4600	NM_144884	30931	Mm.154994	NM_144884	ENSMUSG00000026849	Tor1a	DQ2|Dyt1|torsinA	torsin family 1, member A (torsin A)	protein-coding
unique_peak1-281-10-5-0.771452844287613-1.33892459842472	chr1	106409553	106410075	+	0	NA	Intergenic	Intergenic	-255582	NM_011800	23836	Mm.103640	NM_011800	ENSMUSG00000050840	Cdh20	Cdh7	cadherin 20	protein-coding
common_peak2-22565-24-31--0.206790097232283-0.334168439396943	chr13	63563049	63563504	+	0	NA	Intergenic	Intergenic	-30223	NM_001282942	14088	Mm.126106	NM_007985	ENSMUSG00000021461	Fancc	Facc	Fanconi anemia, complementation group C	protein-coding
common_peak1-16432-28-27-0.245604197763859-0.431536360747188	chr5	134455982	134457004	+	0	NA	Intergenic	Intergenic	-119125	NM_030719	80909	Mm.45218	NM_030719		Gatsl2	7530428J21Rik|AW742413|Gats|Gatsl1	GATS protein-like 2	protein-coding
unique_peak1-5929-12-1-2.64877598508764-3.36932189928148	chr6	89447902	89448286	+	0	NA	intron (NM_025351, intron 4 of 7)	intron (NM_025351, intron 4 of 7)	97552	NM_025351	66098	Mm.20313	NM_025351	ENSMUSG00000030086	Chchd6	0710001P09Rik|1700021B03Rik	coiled-coil-helix-coiled-coil-helix domain containing 6	protein-coding
unique_peak2-36722-2-7--1.91745425626332-1.45399745587252	chr3	52327864	52328310	+	0	NA	Intergenic	L1_Mus4|LINE|L1	-215559	NR_038079	329639	Mm.131245	NR_038079		Gm2447	100039832|A530017F20	predicted gene 2447	ncRNA
common_peak2-28994-27-30-0.0373496405083609-0.315041925765932	chr5	107996018	107996862	+	0	NA	intron (NM_133248, intron 8 of 18)	B3A|SINE|B2	-29952	NM_001163462	231571	Mm.482420	NM_144911	ENSMUSG00000033773	Rpap2	AW060207	RNA polymerase II associated protein 2	protein-coding
unique_peak1-3786-13-2-2.19350952991661-3.03832868024006	chr19	55870527	55871232	+	0	NA	intron (NM_001142920, intron 4 of 11)	intron (NM_001142920, intron 4 of 11)	54579	NM_001142923	21416	Mm.139815	NM_009333	ENSMUSG00000024985	Tcf7l2	TCF4B|TCF4E|Tcf-4|Tcf4|mTcf-4B|mTcf-4E	transcription factor 7 like 2, T cell specific, HMG box	protein-coding
common_peak1-7483-26-63--1.07210090784154-2.89999763406377	chr1	5082762	5083791	+	0	NA	intron (NM_133826, intron 3 of 13)	intron (NM_133826, intron 3 of 13)	10022	NM_133826	108664	Mm.27082	NM_133826	ENSMUSG00000033793	Atp6v1h	0710001F19Rik|AU022349|CGI-11|SFD|SFDalpha|SFDbeta|VMA13	ATPase, H+ transporting, lysosomal V1 subunit H	protein-coding
common_peak2-29624-11-8-0.338768582809301-1.14218153353838	chr6	54369728	54370277	+	0	NA	intron (NR_033635, intron 1 of 13)	ORR1D2-int|LTR|MaLR	10213	NR_033635	100042056	Mm.448157	NM_198118	ENSMUSG00000073067	9130019P16Rik	6430501H15Rik|OTTMUSG00000023151	RIKEN cDNA 9130019P16 gene	ncRNA
unique_peak2-36128-5-22--2.22794229206287-2.81016724606745	chr2	6593852	6594632	+	0	NA	intron (NM_001110231, intron 5 of 15)	intron (NM_001110231, intron 5 of 15)	211800	NM_010160	14007	Mm.398543	NM_010160	ENSMUSG00000002107	Celf2	B230218O03|B230345P09Rik|C88023|CELF-2|CUG-BP2|Cugbp2|D230046B21Rik|Etr-3|Napor|Napor-2|mETR-3	CUGBP, Elav-like family member 2	protein-coding
common_peak2-25807-17-5-1.63333383748388-2.19184853030482	chr19	37886462	37886843	+	0	NA	Intergenic	Lx8|LINE|L1	114354	NM_007811	13082	Mm.42230	NM_007811	ENSMUSG00000024987	Cyp26a1	Cyp26|P450RA|P450RAI|RAH	cytochrome P450, family 26, subfamily a, polypeptide 1	protein-coding
common_peak2-28429-22-22-0.123722149030391-0.342639663781856	chr4	148444074	148444814	+	0	NA	intron (NM_019781, intron 2 of 8)	intron (NM_019781, intron 2 of 8)	29477	NM_019781	56273	Mm.184172	NM_019781	ENSMUSG00000028975	Pex14	Pex14p|R75137	peroxisomal biogenesis factor 14	protein-coding
unique_peak2-36954-0-13--4.64748585253181-3.36932189928148	chr3	108283629	108284085	+	0	NA	intron (NM_001033304, intron 6 of 20)	intron (NM_001033304, intron 6 of 20)	-35680	NM_001204979	20226	Mm.28688	NM_011319	ENSMUSG00000068739	Sars	Sars1|Strs|serRS	seryl-aminoacyl-tRNA synthetase	protein-coding
common_peak2-26098-19-32--0.641706792696767-0.800403172662453	chr2	3332036	3332825	+	0	NA	intron (NM_008579, intron 1 of 2)	RMER5|LTR|ERV1	7490	NM_008579	104362	Mm.2688	NM_008579	ENSMUSG00000026650	Meig1	MLZ-278|Meg1	meiosis expressed gene 1	protein-coding
unique_peak1-898-15-5-1.4272022498345-1.61682445937017	chr11	35948461	35949110	+	0	NA	intron (NM_011856, intron 12 of 28)	intron (NM_011856, intron 12 of 28)	-155194	NM_170779	211652	Mm.31267	NM_170779		Wwc1	AA408228|AU017197|BC037006|Kibra|mKIAA0869	WW, C2 and coiled-coil domain containing 1	protein-coding
common_peak1-11181-18-32--0.731474968130102-0.907815120698057	chr15	76710558	76711299	+	0	NA	intron (NM_145916, intron 1 of 4)	(CA)n|Simple_repeat|Simple_repeat	1222	NM_145916	223669	Mm.38948	NM_145916	ENSMUSG00000033669	Zfp7	KRAB20|KRAB7|Krox-2|Zfp-7|Zfp65|Zfp80|Zfp86-rs1|mszf73-2	zinc finger protein 7	protein-coding
common_peak1-14859-30-47--0.415287091229283-0.618527319161325	chr3	95217333	95218060	+	0	NA	Intergenic	RMER19B|LTR|ERVK	-10933	NR_015490	67654	Mm.75066	NR_015490		4930558C23Rik	-	RIKEN cDNA 4930558C23 gene	ncRNA
unique_peak1-1816-15-5-1.4272022498345-1.61682445937017	chr14	31401453	31402103	+	0	NA	Intergenic	B3A|SINE|B2	16443	NR_037237	100526475		NR_037237		Mir3076	mmu-mir-3076	microRNA 3076	ncRNA
unique_peak2-38131-2-5--1.50241675698448-1.08602067057793	chr6	83321321	83321626	+	0	NA	intron (NM_183138, intron 9 of 10)	intron (NM_183138, intron 9 of 10)	21995	NM_175277	78653	Mm.391470	NM_175277		Bola3	1810056O20Rik	bolA-like 3 (E. coli)	protein-coding
common_peak2-22306-26-35--0.24202590928385-0.384630725886657	chr13	20090536	20091627	+	0	NA	Intergenic	Intergenic	-91295	NM_080288	140580	Mm.342392	NM_080288	ENSMUSG00000041112	Elmo1	6330578D22Rik|C230095H21Rik|CED-12	engulfment and cell motility 1	protein-coding
unique_peak2-38080-3-7--1.41398308995928-1.23214870625617	chr6	50775919	50776362	+	0	NA	Intergenic	Intergenic	50026	NR_045984	319981	Mm.131454	NR_045984		C530044C16Rik	-	RIKEN cDNA C530044C16 gene	ncRNA
unique_peak2-34185-8-14--0.901668177660948-0.660903317613906	chr13	36695533	36696184	+	0	NA	Intergenic	Intergenic	130488	NM_153529	68404	Mm.232930	NM_153529	ENSMUSG00000039114	Nrn1	0710008J23Rik|Cpg15|Nrn	neuritin 1	protein-coding
common_peak2-28403-19-33--0.684775514588653-0.884951936461256	chr4	140961111	140962054	+	0	NA	intron (NM_019701, intron 16 of 19)	intron (NM_019701, intron 16 of 19)	-6961	NM_024412	12733	Mm.167900	NM_024412	ENSMUSG00000033770	Clcnka	C75963|CLC-K1|Clcnk1	chloride channel Ka	protein-coding
common_peak2-29511-25-22-0.338287949288093-0.51032171069054	chr6	34609221	34610127	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	-49770	NM_145575	109624	Mm.308134	NM_145575	ENSMUSG00000029761	Cald1	4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik	caldesmon 1	protein-coding
common_peak1-17377-13-19--0.543456064249594-0.466170754204149	chr7	110018213	110018762	+	0	NA	Intergenic	Intergenic	-7149	NM_147091	259095	Mm.377838	NM_147091	ENSMUSG00000073965	Olfr568	MOR14-11|MOR14-3	olfactory receptor 568	protein-coding
common_peak1-15326-31-31-0.225238670813123-0.416139936131877	chr4	46388966	46390209	+	0	NA	TTS (NM_029086)	TTS (NM_029086)	12708	NM_029086	74753	Mm.45973	NM_029086	ENSMUSG00000028331	5830415F09Rik	AV014846|Nap1	RIKEN cDNA 5830415F09 gene	protein-coding
common_peak1-15456-30-40--0.187876595126211-0.346766333527252	chr4	98923507	98924413	+	0	NA	intron (NM_175029, intron 10 of 10)	PB1D9|SINE|Alu	63122	NM_001145967	242557	Mm.241663	NM_175029	ENSMUSG00000028550	Atg4c	Apg4-C|Apg4c|Atg4cl|Autl1	autophagy related 4C, cysteine peptidase	protein-coding
common_peak1-9115-18-21--0.146512467408946-0.306326795069975	chr11	73047650	73048470	+	0	NA	Intergenic	Intergenic	-3701	NM_001001445	193034	Mm.447485	NM_001001445	ENSMUSG00000005952	Trpv1	OTRPC1|TRPV1alpha|TRPV1beta|VR-1|Vr1	transient receptor potential cation channel, subfamily V, member 1	protein-coding
common_peak1-9376-8-7-0.00522241794757061-1.00793137938329	chr11	98358384	98358795	+	0	NA	intron (NM_011771, intron 3 of 7)	intron (NM_011771, intron 3 of 7)	48756	NM_011771	22780	Mm.133367	NM_011771	ENSMUSG00000018168	Ikzf3	5830411O07Rik|Aiolos|Zfpn1a3|Znfn1a3	IKAROS family zinc finger 3	protein-coding
unique_peak1-3153-9-0-3.18961340640422-3.01029995663981	chr18	37822444	37822961	+	0	NA	exon (NM_033584, exon 1 of 4)	exon (NM_033584, exon 1 of 4)	1103	NM_033584	93709	Mm.247203	NM_033584		Pcdhga1	-	protocadherin gamma subfamily A, 1	protein-coding
common_peak1-8293-78-123--0.14737521622634-0.412878588947788	chr10	31608348	31609875	+	0	NA	intron (NM_001013411, intron 4 of 6)	L1_Mus3|LINE|L1	-279580	NM_001146349	268291	Mm.295212	NM_001146349	ENSMUSG00000063760	Rnf217	AU016819|Ibrdc1	ring finger protein 217	protein-coding
unique_peak2-34859-8-8--0.164702583494742-1.00793137938329	chr15	76900150	76900575	+	0	NA	Intergenic	RMER1C|Other|Other	-14466	NR_108037	74303	Mm.444304	NR_108037	ENSMUSG00000097267	1700109K24Rik	4933425G21Rik	RIKEN cDNA 1700109K24 gene	ncRNA
common_peak1-14821-29-28-0.254309085487539-0.470271536760928	chr3	90587841	90589043	+	0	NA	Intergenic	L1Md_F|LINE|L1	57614	NM_207263	384997	Mm.316644	NM_207263	ENSMUSG00000042250	Pglyrp4	Gm1478|Gm413	peptidoglycan recognition protein 4	protein-coding
common_peak1-15268-18-39--1.00900894365901-1.65365064026544	chr4	32238344	32239077	+	0	NA	Intergenic	Intergenic	187628	NM_172688	26409	Mm.258589	NM_009316	ENSMUSG00000028284	Map3k7	B430101B05|C87327|Tak1	mitogen-activated protein kinase kinase kinase 7	protein-coding
common_peak2-27969-18-12-0.612479433087259-0.739965416525508	chr4	41568841	41569464	+	0	NA	intron (NM_175138, intron 12 of 19)	intron (NM_175138, intron 12 of 19)	18183	NM_027147	69638	Mm.372459	NM_027147	ENSMUSG00000028445	Enho	1110065P19Rik|2310040A07Rik	energy homeostasis associated	protein-coding
common_peak2-20830-21-30--0.384707045120639-0.446094173747089	chr10	128747615	128748509	+	0	NA	Intergenic	Intergenic	-10619	NM_146284	258281	Mm.377412	NM_146284	ENSMUSG00000049573	Olfr780	MOR114-12	olfactory receptor 780	protein-coding
common_peak2-20576-18-36--0.896534214400599-1.30767018140165	chr10	77251369	77251949	+	0	NA	intron (NM_001287074, intron 1 of 11)	intron (NM_001287074, intron 1 of 11)	10219	NM_001205034	100503388	Mm.482880	NM_001205034	ENSMUSG00000096380	Gm19668	-	predicted gene, 19668	protein-coding
unique_peak2-37767-7-8--0.370834171144123-1.00793137938329	chr5	115340783	115341197	+	0	NA	Intergenic	RLTR6-int|LTR|ERV1	-5953	NM_011854	23962	Mm.228363	NM_011854	ENSMUSG00000029561	Oasl2	M1204|Mmu-OASL|Oasl	2'-5' oligoadenylate synthetase-like 2	protein-coding
unique_peak2-34068-13-51--1.92196768750332-5.16048301252722	chr13	110394460	110395855	+	0	NA	intron (NM_011056, intron 3 of 16)	intron (NM_011056, intron 3 of 16)	280219	NR_030644	100124489		NR_030644		Mir582	Mirn582|mmu-mir-582	microRNA 582	ncRNA
common_peak1-19324-70-71-0.450041914933086-1.24174436008482	chr9	123924428	123926288	+	0	NA	Intergenic	RMER6A|LTR|ERVK	-11345	NM_009914	12771	Mm.57050	NM_009914	ENSMUSG00000035448	Ccr3	CC-CKR3|CKR3|Cmkbr1l2|Cmkbr3	chemokine (C-C motif) receptor 3	protein-coding
unique_peak1-5583-10-3-1.35641534500877-1.75805390616669	chr5	150458214	150458723	+	0	NA	Intergenic	ORR1D2|LTR|MaLR	-19578	NM_013559	15505	Mm.270681	NM_013559	ENSMUSG00000029657	Hsph1	105kDa|AI790491|Hsp105|Hsp110|hsp-E7I	heat shock 105kDa/110kDa protein 1	protein-coding
common_peak1-17471-12-10-0.189344366450341-0.386243247519795	chr7	19871203	19871759	+	0	NA	intron (NM_013648, intron 1 of 9)	B1_Mur4|SINE|Alu	3508	NM_013648	20167	Mm.24142	NM_013648	ENSMUSG00000030401	Rtn2	MMS10-P|Ms10p|NSPLI|Nspl1	reticulon 2 (Z-band associated protein)	protein-coding
unique_peak1-6694-9-1-2.18961340640422-2.31132995230379	chr8	31993312	31993735	+	0	NA	Intergenic	Intergenic	-206611	NM_025869	66959	Mm.23916	NM_025869	ENSMUSG00000039661	Dusp26	2310043K02Rik|Skrp3	dual specificity phosphatase 26 (putative)	protein-coding
common_peak1-13867-33-50--0.341087779445966-0.542803625802499	chr2	69897215	69898230	+	0	NA	intron (NM_177376, intron 2 of 34)	intron (NM_177376, intron 2 of 34)	20539	NM_177376	329421	Mm.99648	NM_177376	ENSMUSG00000042064	Myo3b	A430065P19Rik	myosin IIIB	protein-coding
common_peak1-11614-18-23--0.272043349492805-0.34651636097721	chr16	18249056	18249967	+	0	NA	promoter-TSS (NM_011239)	promoter-TSS (NM_011239)	535	NM_001081000	15547	Mm.271798	NM_008307	ENSMUSG00000022721	Trmt2a	Htf9c	TRM2 tRNA methyltransferase 2A	protein-coding
unique_peak2-34152-0-7--3.84013093047421-1.80617997398389	chr13	24760939	24761272	+	0	NA	intron (NM_001286101, intron 2 of 14)	intron (NM_001286101, intron 2 of 14)	30588	NM_029679	193385	Mm.217319	NM_029679	ENSMUSG00000036006	Fam65b	-	family with sequence similarity 65, member B	protein-coding
common_peak1-12627-134-157-0.440788760602322-2.21023084479557	chr18	33889413	33892235	+	0	NA	Intergenic	Lx8|LINE|L1	-63722	NR_038152	69749	Mm.248787	NR_038151	ENSMUSG00000087590	2410004N09Rik	-	RIKEN cDNA 2410004N09 gene	ncRNA
common_peak2-25599-5-4--0.0263084308932156-0.909929411522249	chr19	8818226	8818620	+	0	NA	TTS (NR_105958)	TTS (NR_105958)	962	NR_105958	102465599		NR_105958		Mir6992	mmu-mir-6992	microRNA mir-6992	ncRNA
unique_peak2-33694-6-11--1.01956439034085-1.32595962126035	chr11	106066098	106066829	+	0	NA	intron (NM_026009, intron 7 of 12)	B1_Mm|SINE|Alu	11218	NM_026009	67163	Mm.22109	NM_026009		Ccdc47	2610204L23Rik|C88307|asp4|calumin	coiled-coil domain containing 47	protein-coding
unique_peak2-34628-3-8--1.58390809140159-1.39487600375387	chr14	76788016	76788370	+	0	NA	Intergenic	ORR1C2|LTR|MaLR	-27435	NM_207652	21807	Mm.153272	NM_009366	ENSMUSG00000022010	Tsc22d1	AA589566|AW105905|Egr5|TSC-22|Tgfb1i4|Tsc|Tsc22	TSC22 domain family, member 1	protein-coding
unique_peak1-2542-9-5-0.604650905683064-1.21398586181642	chr16	22839784	22840315	+	0	NA	intron (NM_001081368, intron 2 of 7)	MLT-int|LTR|MaLR	17593	NM_001081368	70573	Mm.68291	NM_001081368	ENSMUSG00000004462	Tbccd1	5730478M09Rik|AU015083|BB165076	TBCC domain containing 1	protein-coding
unique_peak2-39472-0-7--3.84013093047421-1.80617997398389	chr9	56497634	56497967	+	0	NA	intron (NM_181074, intron 3 of 3)	intron (NM_181074, intron 3 of 3)	35260	NM_181074	235402	Mm.246605	NM_181074	ENSMUSG00000049556	Lingo1	4930471K13Rik|AV148400|LERN1|LINGO-1|Lrrn6a|UNQ201	leucine rich repeat and Ig domain containing 1	protein-coding
unique_peak2-38808-7-12--0.901348887842903-1.31827279259406	chr7	133792729	133793349	+	0	NA	intron (NM_029339, intron 1 of 9)	CpG	216	NM_029339	75565	Mm.45686	NM_029339	ENSMUSG00000030714	Ccdc101	1700023O11Rik|9530025I05Rik	coiled-coil domain containing 101	protein-coding
common_peak2-26499-14-19--0.422711934529718-0.403453972741636	chr2	84649458	84650231	+	0	NA	3' UTR (NM_019949, exon 4 of 4)	3' UTR (NM_019949, exon 4 of 4)	10859	NM_019949	56791	Mm.38261	NM_019949	ENSMUSG00000027078	Ube2l6	2810489I21Rik|RIG-B|UBCH8|Ubce8|Ubcm8	ubiquitin-conjugating enzyme E2L 6	protein-coding
unique_peak1-5055-8-6-0.197867495889966-1.03789460276074	chr4	135828739	135829231	+	0	NA	intron (NM_011542, intron 9 of 10)	intron (NM_011542, intron 9 of 10)	-12999	NM_009557	22704	Mm.1504	NM_009557	ENSMUSG00000051351	Zfp46	AI426962|Mlz-4|Zfp-46|Znf436	zinc finger protein 46	protein-coding
unique_peak1-685-6-1-1.5653981103803-1.56314192529759	chr10	77542553	77543039	+	0	NA	TTS (NM_015790)	TTS (NM_015790)	10683	NM_015790	50723	Mm.17819	NM_015790	ENSMUSG00000000732	Icosl	AU044799|B7-H2|B7RP-1|B7h|BG071784|GI50|GL50|GL50-B|ICOS-L|Icoslg|LICOS|Ly115l|mKIAA0653	icos ligand	protein-coding
common_peak2-32251-23-48--0.892942339606128-1.7429888559758	chrX	7573348	7574411	+	0	NA	Intergenic	L1_Rod|LINE|L1	21739	NM_027227	69824	Mm.279756	NM_027227	ENSMUSG00000031163	Glod5	2010001H14Rik|AV061890	glyoxalase domain containing 5	protein-coding
common_peak1-15184-20-11-0.903112283870037-1.11267835143409	chr3	152554744	152555644	+	0	NA	intron (NM_012028, intron 2 of 4)	B4A|SINE|B4	89977	NM_012028	26938	Mm.40915	NM_012028		St6galnac5	AI851940|Siat7e	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	protein-coding
common_peak1-11543-42-80--0.59752067501744-1.40346842354903	chr16	5049086	5050749	+	0	NA	promoter-TSS (NM_028720)	promoter-TSS (NM_028720)	86	NM_001079814	74022	Mm.21652	NM_028720	ENSMUSG00000022536	Glyr1	2810419J22Rik|3930401K13Rik|AW545332|Npac	glyoxylate reductase 1 homolog (Arabidopsis)	protein-coding
common_peak2-28614-7-9--0.522837264589173-1.05908390183068	chr5	24605045	24605328	+	0	NA	intron (NM_145401, intron 1 of 15)	intron (NM_145401, intron 1 of 15)	1274	NM_145401	108099	Mm.33649	NM_145401	ENSMUSG00000028944	Prkag2	2410051C13Rik|AAKG|AAKG2|AI854673|H91620p|WPWS	protein kinase, AMP-activated, gamma 2 non-catalytic subunit	protein-coding
common_peak1-12608-67-56-0.711521468618254-2.31718908403158	chr18	25714919	25716478	+	0	NA	intron (NM_001146294, intron 2 of 12)	intron (NM_001146294, intron 2 of 12)	196786	NM_133195	108013	Mm.266435	NM_133195	ENSMUSG00000024268	Celf4	A230070D14Rik|BRUNOL-4|Brul4|Brunol4|C130060B05Rik	CUGBP, Elav-like family member 4	protein-coding
common_peak2-27552-20-41--0.904242638187568-1.56490221051684	chr3	96414111	96414859	+	0	NA	intron (NR_003619, intron 1 of 1)	B3|SINE|B2	9429	NM_001163170	280411	Mm.482147	NM_001163170	ENSMUSG00000049288	Lix1l	D130027M04Rik	Lix1-like	protein-coding
unique_peak2-36435-2-5--1.50241675698448-1.08602067057793	chr2	131422963	131423340	+	0	NA	Intergenic	(GA)n|Simple_repeat|Simple_repeat	-35130	NM_013460	11550	Mm.389380	NM_013460		Adra1d	Adra-1|Adra1|Adra1a|Gpcr8|Spr8|[a]1d|alpha1D-AR	adrenergic receptor, alpha 1d	protein-coding
unique_peak1-2045-21-3-2.56948926526624-4.33845181153635	chr15	27419010	27419738	+	0	NA	intron (NM_020332, intron 1 of 11)	B1_Mm|SINE|Alu	22942	NM_020332	11732	Mm.265264	NM_020332	ENSMUSG00000022265	Ank	Ankh|D15Ertd221e|ank|mKIAA1581	progressive ankylosis	protein-coding
unique_peak1-7271-8-2-1.42025991722641-1.65811743852845	chr9	96799866	96800478	+	0	NA	Intergenic	Intergenic	-10279	NM_001289645	235534	Mm.233031	NM_153420	ENSMUSG00000043587	Pxylp1	9430094M07Rik|Acpl2|BB177120|C130099A20Rik	2-phosphoxylose phosphatase 1	protein-coding
unique_peak2-38268-6-8--0.60452689106201-1.03789460276074	chr6	128355467	128355876	+	0	NA	intron (NM_001162858, intron 2 of 5)	intron (NM_001162858, intron 2 of 5)	5887	NM_001162858	60345	Mm.269883	NM_021717	ENSMUSG00000001520	Nrip2	AW491344|NIX1	nuclear receptor interacting protein 2	protein-coding
common_peak2-27976-41-61--0.253047605538215-0.456849196733789	chr4	43393943	43395286	+	0	NA	promoter-TSS (NM_001037709)	promoter-TSS (NM_001037709)	-240	NM_001037709	100213	Mm.235730	NM_199057	ENSMUSG00000035969	Rusc2	AI840675|mKIAA0375	RUN and SH3 domain containing 2	protein-coding
unique_peak1-7127-9-3-1.18961340640422-1.57096726280955	chr9	49922114	49922613	+	0	NA	Intergenic	L1MEc|LINE|L1	-315189	NM_010875	17967	Mm.4974	NM_010875		Ncam1	CD56|E-NCAM|NCAM-1|Ncam	neural cell adhesion molecule 1	protein-coding
unique_peak1-1253-9-2-1.60465090568306-1.87199725847353	chr11	115958670	115959227	+	0	NA	Intergenic	ID_B1|SINE|B4	-10670	NM_016852	22378	Mm.284792	NM_016852	ENSMUSG00000034341	Wbp2	-	WW domain binding protein 2	protein-coding
common_peak1-8766-51-45-0.55136186954556-1.24554587181539	chr11	6199753	6201085	+	0	NA	intron (NM_001252287, intron 2 of 22)	intron (NM_001252287, intron 2 of 22)	7858	NM_001252288	18293	Mm.276348	NM_010956	ENSMUSG00000020456	Ogdh	2210403E04Rik|2210412K19Rik|AA409584|d1401|mKIAA4192	oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)	protein-coding
common_peak2-23829-21-28--0.288491729861336-0.367910579842127	chr15	101366385	101367347	+	0	NA	intron (NM_016879, intron 2 of 3)	intron (NM_016879, intron 2 of 3)	-3615	NM_008474	16680	Mm.25292	NM_008474	ENSMUSG00000044294	Krt84	AV235125|HRb-1|Krt2-16|Krt2-3	keratin 84	protein-coding
common_peak2-23055-13-21--0.680959587999529-0.607095980551316	chr14	70288992	70289677	+	0	NA	intron (NM_028560, intron 3 of 6)	intron (NM_028560, intron 3 of 6)	49120	NM_028526	73523	Mm.23509	NM_028526	ENSMUSG00000022085	Pebp4	PEBP-4	phosphatidylethanolamine binding protein 4	protein-coding
common_peak2-28506-29-16-1.02482723936477-1.87578206828671	chr5	24821212	24821938	+	0	NA	exon (NM_001081383, exon 36 of 59)	exon (NM_001081383, exon 36 of 59)	92864	NM_144908	231050	Mm.246718	NM_144908	ENSMUSG00000038072	Galnt11	A430075I06Rik|AI648252|E430002F06Rik	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11	protein-coding
common_peak2-28342-13-17--0.391452970804544-0.364171515310935	chr4	135352562	135353152	+	0	NA	intron (NM_001085509, intron 22 of 36)	intron (NM_001085509, intron 22 of 36)	37227	NM_001085509	242702	Mm.318639	NM_001085509	ENSMUSG00000037139	Myom3	8430427K15Rik|Gm434	myomesin family, member 3	protein-coding
common_peak1-19201-26-38--0.357503126703786-0.505877949819268	chr9	102625453	102626484	+	0	NA	exon (NM_019764, exon 3 of 10)	exon (NM_019764, exon 3 of 10)	5834	NM_019764	56332	Mm.21145	NM_019764	ENSMUSG00000032531	Amotl2	AW549739|C79691|Lccp|MASCOT|mKIAA0989	angiomotin-like 2	protein-coding
common_peak2-29716-18-18-0.0649916377847664-0.323898164595606	chr6	83775190	83776018	+	0	NA	intron (NM_146169, intron 2 of 4)	B1_Mur1|SINE|Alu	6131	NM_146169	232164	Mm.404420	NM_146169	ENSMUSG00000045896	Paip2b	-	poly(A) binding protein interacting protein 2B	protein-coding
common_peak1-15118-33-97--1.28337228158968-5.61067957814592	chr3	137867333	137868477	+	0	NA	Intergenic	Intergenic	-12832	NM_009626	11529	Mm.8473	NM_009626		Adh7	AI325182|Adh-3|Adh-3e|Adh-3t|Adh3|Adh3-e|Adh3-t|Adh4|Adt-1	alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide	protein-coding
unique_peak2-38279-4-5--0.608423014574403-0.909929411522249	chr6	133706929	133707278	+	0	NA	Intergenic	Intergenic	10323	NM_001177652	545886	Mm.449716	NM_001177652		Gm5886	EG545886|smarp	predicted gene 5886	protein-coding
unique_peak2-35846-0-6--3.64748585253182-1.56314192529759	chr18	74002758	74003088	+	0	NA	Intergenic	Intergenic	-16118	NM_027741	71263	Mm.126220	NM_027741	ENSMUSG00000064036	Mro	4930507C04Rik|4933435E20Rik	maestro	protein-coding
unique_peak2-34542-4-7--1.02346051385325-1.09384600808989	chr14	56668215	56668745	+	0	NA	Intergenic	RLTR22_Mus|LTR|ERVK	7520	NM_008571	17225	Mm.4409	NM_008571	ENSMUSG00000022226	Mcpt2	MMCP-2|Mcp-2	mast cell protease 2	protein-coding
common_peak1-16908-11-5-0.923731083530457-1.477227296591	chr6	72528579	72529097	+	0	NA	intron (NM_001253692, intron 6 of 11)	B3|SINE|B2	19569	NM_144917	232089	Mm.167232	NM_144917	ENSMUSG00000056698	Elmod3	AI844780|C330008I15Rik|RBM29|Rbed1	ELMO/CED-12 domain containing 3	protein-coding
unique_peak1-7047-8-3-1.00522241794757-1.39487600375387	chr9	13697013	13697519	+	0	NA	Intergenic	Intergenic	65095	NM_176836	72826	Mm.246174	NM_176836	ENSMUSG00000037808	Fam76b	2810485I05Rik|C78303	family with sequence similarity 76, member B	protein-coding
common_peak1-12135-26-25-0.22745937401737-0.399869693390336	chr17	27546953	27548113	+	0	NA	Intergenic	Intergenic	52491	NR_106077	102466228		NR_106077		Mir7218	mmu-mir-7218	microRNA mir-7218	ncRNA
common_peak1-11589-72-69-0.539300795927351-1.69262915773265	chr16	16599140	16600794	+	0	NA	Intergenic	CpG	-39678	NM_139234	224014	Mm.256131	NM_139232	ENSMUSG00000022788	Fgd4	9030023J02Rik|9330209B17Rik|Frabp|ZFYVE6	FYVE, RhoGEF and PH domain containing 4	protein-coding
common_peak1-13446-13-8-0.608547029195456-0.660903317613904	chr19	55875019	55875505	+	0	NA	intron (NM_001142920, intron 4 of 11)	intron (NM_001142920, intron 4 of 11)	58962	NM_001142923	21416	Mm.139815	NM_009333	ENSMUSG00000024985	Tcf7l2	TCF4B|TCF4E|Tcf-4|Tcf4|mTcf-4B|mTcf-4E	transcription factor 7 like 2, T cell specific, HMG box	protein-coding
unique_peak2-35633-2-9--2.23938235115068-1.87199725847353	chr17	87671870	87672163	+	0	NA	Intergenic	Intergenic	-6729	NM_139295	193813	Mm.30251	NM_139295	ENSMUSG00000024150	Mcfd2	1810021C21Rik|F5f8d|Lman1ip|Sdnsf	multiple coagulation factor deficiency 2	protein-coding
unique_peak1-6277-8-3-1.00522241794757-1.39487600375387	chr7	28585457	28585984	+	0	NA	Intergenic	Intergenic	35028	NR_033484	100043229	Mm.458666	NR_033484		Gm10046	ENSMUSG00000058661	predicted gene 10046	ncRNA
unique_peak2-36298-4-4--0.345388608740609-0.864171920961574	chr2	71803213	71803596	+	0	NA	Intergenic	RMER1B|Other|Other	-15868	NM_001204167	56508	Mm.196153	NM_019688	ENSMUSG00000049044	Rapgef4	1300003D15Rik|5730402K07Rik|6330581N18Rik|EPAC 2|Epac-2|Epac2|mKIAA4040	Rap guanine nucleotide exchange factor (GEF) 4	protein-coding
common_peak1-18515-24-27--0.0141450192898871-0.304978344874324	chr8	90828198	90828937	+	0	NA	intron (NM_007406, intron 3 of 27)	RLTR20A2|LTR|ERVK	10464	NM_001037724	11513	Mm.288206	NM_007406	ENSMUSG00000031659	Adcy7	AA407758	adenylate cyclase 7	protein-coding
common_peak1-10689-26-30--0.0262972182284127-0.301029995663988	chr14	54894160	54894820	+	0	NA	Intergenic	Intergenic	8110	NM_010991	18348	Mm.436623	NM_010991	ENSMUSG00000048153	Olfr49	IC6|MOR1181	olfactory receptor 49	protein-coding
unique_peak2-34828-10-20--1.03590207776999-1.03889213727317	chr15	75048250	75049127	+	0	NA	Intergenic	Intergenic	-50163	NM_008530	17071	Mm.377095	NM_008530	ENSMUSG00000022583	Ly6f	-	lymphocyte antigen 6 complex, locus F	protein-coding
unique_peak2-39764-9-15--0.81038659359578-0.630231561310125	chrX	6399541	6400462	+	0	NA	intron (NM_177914, intron 1 of 27)	intron (NM_177914, intron 1 of 27)	43569	NM_177914	331374	Mm.392752	NM_177914	ENSMUSG00000062393	Dgkk	Gm360	diacylglycerol kinase kappa	protein-coding
common_peak2-31439-47-55-0.127486502708944-0.368450600203463	chr8	104340326	104341691	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	968003	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
common_peak1-9873-56-61-0.281399515052368-0.614532557650135	chr12	83631542	83633200	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-85654	NM_015812	50779	Mm.153013	NM_015812	ENSMUSG00000021219	Rgs6	-	regulator of G-protein signaling 6	protein-coding
unique_peak2-34168-3-6--1.22133801201688-1.08602067057793	chr13	31618189	31618614	+	0	NA	Intergenic	Lx7|LINE|L1	-31638	NM_008239	15220	Mm.44235	NM_008239	ENSMUSG00000038415	Foxq1	HFH-1|Hfh1|Hfh1l|sa	forkhead box Q1	protein-coding
common_peak1-12110-8-9--0.316705676939792-1.03275496310833	chr17	26538147	26538564	+	0	NA	Intergenic	Intergenic	-13555	NM_001081656	240055	Mm.133211	NM_001081656	ENSMUSG00000034413	Neurl1b	C230078M08Rik|EG240055	neuralized homolog 1b (Drosophila)	protein-coding
unique_peak1-7129-8-3-1.00522241794757-1.39487600375387	chr9	49924166	49924799	+	0	NA	Intergenic	L1MA5|LINE|L1	-317308	NM_010875	17967	Mm.4974	NM_010875		Ncam1	CD56|E-NCAM|NCAM-1|Ncam	neural cell adhesion molecule 1	protein-coding
common_peak2-23684-18-25--0.38752056691274-0.421916810733234	chr15	85970929	85971957	+	0	NA	3' UTR (NM_145475, exon 13 of 13)	3' UTR (NM_145475, exon 13 of 13)	45128	NM_145475	223753	Mm.222685	NM_145475	ENSMUSG00000035891	Cerk	AI848610|D330016D08Rik|mKIAA1646	ceramide kinase	protein-coding
common_peak2-24829-13-13--0.0288828914198356-0.309074325783021	chr17	72835638	72836382	+	0	NA	intron (NM_007439, intron 1 of 28)	intron (NM_007439, intron 1 of 28)	117637	NM_007439	11682	Mm.311854	NM_007439	ENSMUSG00000055471	Alk	CD246|Tcrz	anaplastic lymphoma kinase	protein-coding
unique_peak2-32901-4-7--1.02346051385325-1.09384600808989	chr10	19043712	19044094	+	0	NA	Intergenic	Intergenic	-32442	NM_053008	94222	Mm.156946	NM_053008	ENSMUSG00000045591	Olig3	Bhlhb7|bHLHe20	oligodendrocyte transcription factor 3	protein-coding
common_peak1-8128-36-32-0.434926966809301-0.779916249636873	chr1	186748886	186750089	+	0	NA	intron (NM_145515, intron 6 of 17)	intron (NM_145515, intron 6 of 17)	-42572	NM_178692	226777	Mm.169542	NM_178692	ENSMUSG00000039349	C130074G19Rik	-	RIKEN cDNA C130074G19 gene	protein-coding
common_peak1-11044-64-83-0.0731289789298426-0.332781193575455	chr15	51852884	51855306	+	0	NA	Intergenic	Intergenic	-17558	NM_175503	239435	Mm.24204	NM_175503	ENSMUSG00000068522	Aard	A5D3|AV328152	alanine and arginine rich domain containing protein	protein-coding
common_peak2-32000-14-14--0.00767443525087419-0.308519316180257	chr9	70903011	70903697	+	0	NA	Intergenic	Intergenic	107086	NM_001271843	64008	Mm.449427	NM_022026	ENSMUSG00000032204	Aqp9	1700020I22Rik|AI266899|AQP-9	aquaporin 9	protein-coding
common_peak2-26626-12-15--0.351224014912361-0.332077462497413	chr2	118926545	118927148	+	0	NA	intron (NM_029617, intron 21 of 23)	ID_B1|SINE|B4	-11707	NM_011234	19361	Mm.330492	NM_011234		Rad51	AV304093|Rad51a|Reca	RAD51 homolog	protein-coding
common_peak1-7683-22-37--0.600643408356181-0.808568985218824	chr1	79760884	79761794	+	0	NA	Intergenic	PB1D10|SINE|Alu	-2995	NM_027057	69368	Mm.293273	NM_027057	ENSMUSG00000073643	Wdfy1	1700013B03Rik|1700120F24Rik|FENS-1|Jr1|WDF1|ZFYVE17|mKIAA1435	WD repeat and FYVE domain containing 1	protein-coding
common_peak2-21944-15-17--0.157760250886656-0.307611222530528	chr12	31073901	31074815	+	0	NA	Intergenic	Intergenic	-16118	NM_172951	268534	Mm.279765	NM_172951	ENSMUSG00000020672	Sntg2	2210008K22Rik|9530013L23|BB121248	syntrophin, gamma 2	protein-coding
common_peak2-24012-5-6--0.511735258063458-0.947717972411649	chr16	21333628	21333844	+	0	NA	Intergenic	Intergenic	-36791	NR_046162	328646	Mm.404748	NR_046162	ENSMUSG00000096918	Gm16863	A830060N17	predicted gene, 16863	ncRNA
unique_peak2-35884-2-6--1.72480917832092-1.26211192963361	chr18	84160138	84160555	+	0	NA	Intergenic	L1MA6|LINE|L1	95608	NM_001081300	110796	Mm.102136	NM_001081300	ENSMUSG00000046982	Tshz1	5730407I04Rik|D18Bwg1409e|Mtsh1|NY-CO-33|Sdccag33|Tsh1|mKIAA4206|teashirt1	teashirt zinc finger family member 1	protein-coding
unique_peak1-5043-7-2-1.21412832957703-1.45399745587252	chr4	133881108	133881631	+	0	NA	intron (NM_001039048, intron 6 of 8)	intron (NM_001039048, intron 6 of 8)	10334	NM_001039048	433766	Mm.331961	NM_001039048	ENSMUSG00000028834	Trim63	MuRF1|RF1|Rnf28	tripartite motif-containing 63	protein-coding
unique_peak2-33801-4-7--1.02346051385325-1.09384600808989	chr11	120539514	120539969	+	0	NA	exon (NM_001164224, exon 3 of 14)	exon (NM_001164224, exon 3 of 14)	1766	NM_001164224	68938	Mm.294020	NM_026877	ENSMUSG00000025142	Aspscr1	1190006K01Rik|ASPC|ASPCR1|ASPL|ASPS|RCC17|TUG	alveolar soft part sarcoma chromosome region, candidate 1 (human)	protein-coding
unique_peak1-5260-15-1-3.01216475055566-4.18809100057339	chr5	64324426	64325075	+	0	NA	intron (NM_145923, intron 3 of 6)	intron (NM_145923, intron 3 of 6)	35386	NM_145923	100532	Mm.243632	NM_145923	ENSMUSG00000047881	Rell1	AA536743	RELT-like 1	protein-coding
unique_peak2-37968-8-6-0.197867495889966-1.03789460276074	chr6	99188550	99188979	+	0	NA	intron (NM_053202, intron 3 of 18)	intron (NM_053202, intron 3 of 18)	27745	NM_001197321	108655	Mm.234965	NM_053202	ENSMUSG00000030067	Foxp1	3110052D19Rik|4932443N09Rik|AI461938|AW494214	forkhead box P1	protein-coding
unique_peak2-33923-0-20--5.23244835325297-4.8766546284749	chr12	69547276	69547965	+	0	NA	Intergenic	L1Md_F|LINE|L1	712553	NM_009093	20090	Mm.379006	NM_009093	ENSMUSG00000034892	Rps29	-	ribosomal protein S29	protein-coding
common_peak1-17887-12-27--1.15857893696997-1.38791538138627	chr7	118532827	118533628	+	0	NA	Intergenic	Lx4A|LINE|L1	-267038	NR_015573	75479	Mm.381620	NR_015573		1700012D14Rik	-	RIKEN cDNA 1700012D14 gene	ncRNA
common_peak1-9847-17-13-0.410941416147434-0.546772548767014	chr12	79089086	79089750	+	0	NA	Intergenic	Intergenic	-238224	NM_172952	268566	Mm.341742	NM_145965	ENSMUSG00000047454	Gphn	5730552E08Rik|AI662856|BC027112|C230040D23|GPH|GPHRYN|geph	gephyrin	protein-coding
unique_peak2-34916-2-7--1.91745425626332-1.45399745587252	chr15	83564399	83564835	+	0	NA	Intergenic	Intergenic	-9148	NM_022723	64706	Mm.40393	NM_022723	ENSMUSG00000016763	Scube1	7330410C13Rik|A630023E24Rik	signal peptide, CUB domain, EGF-like 1	protein-coding
common_peak2-31597-15-9-0.690236655668294-0.732381977911291	chr8	121696014	121696463	+	0	NA	intron (NM_019707, intron 7 of 13)	intron (NM_019707, intron 7 of 13)	-172200	NM_024219	68196	Mm.358714	NM_024219	ENSMUSG00000031839	Hsbp1	0610007A03Rik|AA408769|Hsp25	heat shock factor binding protein 1	protein-coding
common_peak1-17159-46-39-0.576067848361439-1.27570999829275	chr6	119332454	119334285	+	0	NA	intron (NM_197985, intron 1 of 7)	RLTR22_Mur|LTR|ERVK	34132	NM_197985	68465	Mm.291826	NM_197985	ENSMUSG00000030168	Adipor2	1110001I14Rik|ADCR2|AI115388|AW554121|D6Ucla1e|Paqr2	adiponectin receptor 2	protein-coding
common_peak1-14095-20-31--0.511925215408807-0.634510163964152	chr2	124857888	124858684	+	0	NA	Intergenic	Intergenic	-35577	NM_175034	317750	Mm.330538	NM_175034	ENSMUSG00000035183	Slc24a5	F630045L20Rik|JSX|NCKX5|NCX5|Oca6	solute carrier family 24, member 5	protein-coding
common_peak1-9101-32-18-1.03116450577607-2.02129774107186	chr11	70579592	70580752	+	0	NA	intron (NM_177565, intron 1 of 1)	intron (NM_177565, intron 1 of 1)	2223	NM_177565	193043	Mm.40966	NM_177565	ENSMUSG00000043602	Zfp3	AI854635|B230309J24|Fnp-1|Zfp-3	zinc finger protein 3	protein-coding
unique_peak1-3524-18-4-1.99099105634099-2.82951996911245	chr19	18890995	18891948	+	0	NA	intron (NM_153417, intron 17 of 38)	intron (NM_153417, intron 17 of 38)	66998	NM_153417	225997	Mm.215171	NM_153417	ENSMUSG00000024727	Trpm6	CHAK2|TRPM6/CHAK2	transient receptor potential cation channel, subfamily M, member 6	protein-coding
common_peak1-16259-10-8-0.186490343566457-1.078512453669	chr5	105797983	105798419	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-22710	NM_001039647	634650	Mm.458435	NM_001039647	ENSMUSG00000092021	Gbp11	EG634650|Gm7141	guanylate binding protein 11	protein-coding
unique_peak1-2158-7-3-0.799090830298189-1.23214870625617	chr15	59484868	59485392	+	0	NA	intron (NM_144549, intron 2 of 2)	intron (NM_144549, intron 2 of 2)	4921	NM_144549	211770	Mm.40298	NM_144549	ENSMUSG00000032501	Trib1	A530090O15Rik|TRB-1|Trb1	tribbles homolog 1 (Drosophila)	protein-coding
common_peak1-11049-31-70--0.924508448691559-2.54750191086934	chr15	53345070	53346158	+	0	NA	intron (NM_177225, intron 4 of 4)	Lx4B|LINE|L1	-167876	NM_010162	14042	Mm.309395	NM_010162		Ext1	AA409028	exostoses (multiple) 1	protein-coding
common_peak1-8421-22-24-0.00342791531268016-0.305461879681376	chr10	76032482	76033378	+	0	NA	TTS (NM_029661)	TTS (NM_029661)	-5463	NM_080845	14317	Mm.36278	NM_080845	ENSMUSG00000001155	Ftcd	-	formiminotransferase cyclodeaminase	protein-coding
unique_peak2-38366-5-6--0.511735258063458-0.947717972411649	chr7	5019602	5019898	+	0	NA	exon (NM_133671, exon 5 of 12)	exon (NM_133671, exon 5 of 12)	6005	NM_001205231	22185	Mm.360389	NM_133671	ENSMUSG00000030435	U2af2	65kDa	U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2	protein-coding
common_peak2-30703-23-19-0.399839409621718-0.538442145997695	chr7	112265928	112266842	+	0	NA	Intergenic	Intergenic	-3588	NM_207557	404318	Mm.377938	NM_207557	ENSMUSG00000095248	Olfr681	MOR4014	olfactory receptor 681	protein-coding
unique_peak2-39667-6-7--0.434601889619698-0.97990265578305	chr9	107644258	107644681	+	0	NA	intron (NM_148930, intron 24 of 24)	B1_Mus2|SINE|Alu	28864	NM_148930	83486	Mm.259197	NM_148930	ENSMUSG00000032580	Rbm5	D030069N10Rik	RNA binding motif protein 5	protein-coding
common_peak1-11741-9-7-0.18961340640422-1.05908390183068	chr16	34860541	34861147	+	0	NA	exon (NM_139300, exon 3 of 32)	exon (NM_139300, exon 3 of 32)	75808	NM_139300	107589	Mm.33360	NM_139300	ENSMUSG00000022836	Mylk	9530072E15Rik|A930019C19Rik|AW489456|KRP|MLCK108|MLCK210|Mlck|smMLCK	myosin, light polypeptide kinase	protein-coding
common_peak2-31837-35-37-0.183442745018919-0.398838069828027	chr9	45054837	45055825	+	0	NA	intron (NM_001198971, intron 4 of 4)	intron (NM_001198971, intron 4 of 4)	19459	NR_106054	102466803		NR_106054		Mir7086	mmu-mir-7086	microRNA mir-7086	ncRNA
unique_peak1-4174-11-3-1.50869358425161-1.95434855131066	chr2	113455846	113456553	+	0	NA	intron (NM_001285459, intron 12 of 16)	intron (NM_001285459, intron 12 of 16)	-69048	NM_001287818	14260	Mm.4938	NM_010230	ENSMUSG00000044042	Fmn1	Fmn|ld	formin 1	protein-coding
unique_peak2-38416-2-7--1.91745425626332-1.45399745587252	chr7	24824732	24825161	+	0	NA	Intergenic	LTRIS3|LTR|ERV1	-14847	NM_203489	209824	Mm.377233	NM_203489	ENSMUSG00000066723	Vmn1r183	Gm476|V1rd15	vomeronasal 1 receptor 183	protein-coding
unique_peak2-32707-1-6--2.43441193227435-1.56314192529759	chr1	153224518	153224902	+	0	NA	intron (NM_025819, intron 17 of 19)	B3|SINE|B2	33082	NM_001039511	117198	Mm.33764	NM_028582	ENSMUSG00000023150	Ivns1abp	1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850	influenza virus NS1A binding protein	protein-coding
common_peak1-16848-14-8-0.729291158915332-0.771068449301682	chr6	54069372	54070109	+	0	NA	intron (NM_001163640, intron 1 of 12)	intron (NM_001163640, intron 1 of 12)	79814	NM_001163640	69993	Mm.321147	NM_023543	ENSMUSG00000004633	Chn2	1700026N20Rik|4930557O16Rik|ARHGAP3|Bch	chimerin 2	protein-coding
common_peak2-30633-33-41--0.0609798602532319-0.303710893903464	chr7	97579817	97580819	+	0	NA	Intergenic	Intergenic	5496	NM_027298	70054	Mm.307198	NM_027298	ENSMUSG00000044362	Ccdc89	1700019B01Rik|AU022100|BOIP	coiled-coil domain containing 89	protein-coding
common_peak1-10862-9-5-0.604650905683064-1.21398586181642	chr14	122982393	122982866	+	0	NA	intron (NM_144844, intron 5 of 23)	intron (NM_144844, intron 5 of 23)	49079	NM_144844	110821	Mm.23876	NM_144844	ENSMUSG00000041650	Pcca	C79630	propionyl-Coenzyme A carboxylase, alpha polypeptide	protein-coding
common_peak2-27793-64-126--0.523238285063562-1.77406540505694	chr3	138143159	138144938	+	0	NA	intron (NM_175224, intron 2 of 10)	intron (NM_175224, intron 2 of 10)	8298	NM_175224	75624	Mm.26833	NM_175224	ENSMUSG00000005813	Metap1	1700029C17Rik|AW047992|mKIAA0094	methionyl aminopeptidase 1	protein-coding
common_peak2-28087-59-94--0.24449160745837-0.545897237751466	chr4	83485884	83486900	+	0	NA	intron (NM_001081012, intron 25 of 25)	L1MB2|LINE|L1	314943	NM_001081012	320226	Mm.180032	NM_029117	ENSMUSG00000052407	Ccdc171	4930418J05Rik|4930473A06Rik|A330015D16Rik	coiled-coil domain containing 171	protein-coding
unique_peak1-5250-7-1-1.79909083029819-1.80617997398389	chr5	53522894	53523422	+	0	NA	intron (NM_172710, intron 16 of 23)	intron (NM_172710, intron 16 of 23)	81533	NM_172710	231238	Mm.235020	NM_172710	ENSMUSG00000029189	Sel1l3	2310045A20Rik|AI429585|mKIAA0746	sel-1 suppressor of lin-12-like 3 (C. elegans)	protein-coding
common_peak1-7675-10-4-1.03448725012141-1.5150158574804	chr1	77460878	77461377	+	0	NA	intron (NM_007936, intron 3 of 17)	intron (NM_007936, intron 3 of 17)	32216	NR_105770	102465180		NR_105770		Mir6352	mmu-mir-6352	microRNA mir-6352	ncRNA
common_peak2-27223-17-37--1.02963117523855-1.57996244908225	chr3	51408257	51409066	+	0	NA	Intergenic	Lx6|LINE|L1	-43916	NM_080793	73251	Mm.192111	NM_080793	ENSMUSG00000037111	Setd7	1600028F23Rik|H3K4MT|KMT7|Set7|Set7/9|mKIAA1717	SET domain containing (lysine methyltransferase) 7	protein-coding
unique_peak2-37405-6-12--1.13504160776079-1.45089835786865	chr4	141790225	141790654	+	0	NA	intron (NM_001109685, intron 1 of 7)	(CAAAC)n|Simple_repeat|Simple_repeat	4877	NM_001109685	71529	Mm.255986	NM_144531	ENSMUSG00000040606	Kazn	2310007B04Rik|9030409G11Rik|AI256607|AI666764|AW061099|Kaz|Kazrin	kazrin, periplakin interacting protein	protein-coding
unique_peak2-36491-9-14--0.717277189204299-0.53895475198017	chr2	153436668	153437263	+	0	NA	Intergenic	Intergenic	21552	NM_001195390	99311	Mm.294478	NM_133850	ENSMUSG00000056941	Commd7	2310010I22Rik|AW060956|mU3	COMM domain containing 7	protein-coding
common_peak2-23876-6-5--0.0195643903408542-0.947717972411649	chr15	103257892	103258153	+	0	NA	intron (NM_028797, intron 2 of 8)	(TCTA)n|Simple_repeat|Simple_repeat	2836	NM_028797	74174	Mm.325325	NM_028797	ENSMUSG00000022487	Gtsf1	1700006H03Rik|Cue110	gametocyte specific factor 1	protein-coding
unique_peak1-4228-13-6-0.971117108580164-1.01572999746118	chr2	122783118	122783779	+	0	NA	Intergenic	RMER15|LTR|ERVL	175713	NM_021507	59010	Mm.28986	NM_021507	ENSMUSG00000005803	Sqrdl	0610039J17Rik|4930557M22Rik	sulfide quinone reductase-like (yeast)	protein-coding
unique_peak2-33240-8-7-0.00522241794757061-1.00793137938329	chr10	121796248	121796712	+	0	NA	Intergenic	MamRep605|Unknown|Unknown	-89075	NM_016847	54140	Mm.4351	NM_016847	ENSMUSG00000020123	Avpr1a	AVPR|Avpr1|V1a|V1aR	arginine vasopressin receptor 1A	protein-coding
common_peak1-17116-41-22-1.17758674879165-3.01957526180442	chr6	114919638	114921587	+	0	NA	Intergenic	MTD|LTR|MaLR	-48842	NM_177683	232334	Mm.268357	NM_177683		Vgll4	BC048841|VGL-4	vestigial like 4 (Drosophila)	protein-coding
unique_peak2-32545-3-7--1.41398308995928-1.23214870625617	chr1	71865802	71866226	+	0	NA	Intergenic	Intergenic	-68672	NR_027658	667931	Mm.214128	NR_027658		Gm8883	EG667931|Gm554	predicted gene 8883	ncRNA
common_peak2-23078-9-20--1.20270401637454-1.23014042908325	chr14	75786560	75787236	+	0	NA	Intergenic	Lx8|LINE|L1	-68891	NM_001128093	380918	Mm.484360	NM_001128093	ENSMUSG00000091722	Siah3	Gm912	seven in absentia homolog 3 (Drosophila)	protein-coding
common_peak1-16869-92-117-0.209709034340923-0.611164403819789	chr6	57824056	57825566	+	0	NA	Intergenic	Intergenic	26173	NM_134178	171196	Mm.377175	NM_134178	ENSMUSG00000093501	Vmn1r22	V1rc23	vomeronasal 1 receptor 22	protein-coding
unique_peak2-36413-1-4--1.94898510510411-1.10720996964787	chr2	127336027	127336388	+	0	NA	intron (NM_019789, intron 2 of 8)	intron (NM_019789, intron 2 of 8)	10921	NM_001291005	56461	Mm.315292	NM_019789	ENSMUSG00000079056	Kcnip3	4933407H12Rik|AI413860|Csen|DREAM|KChIP3|R74849	Kv channel interacting protein 3, calsenilin	protein-coding
common_peak1-13324-55-29-1.29772927554418-4.71757460358329	chr19	42689517	42691135	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	-3030	NM_053083	67573	Mm.178767	NM_053083	ENSMUSG00000025185	Loxl4	4833426I20Rik|Loxc	lysyl oxidase-like 4	protein-coding
unique_peak1-2468-8-2-1.42025991722641-1.65811743852845	chr16	49921898	49922430	+	0	NA	Intergenic	Intergenic	-58409	NR_045001	628951	Mm.428032	NR_045001		Gm6936	-	predicted gene 6936	ncRNA
unique_peak1-2925-7-0-2.79909083029819-2.40823996531185	chr17	50470598	50471116	+	0	NA	Intergenic	Intergenic	-37912	NM_001277863	13164	Mm.280641	NM_010021	ENSMUSG00000010592	Dazl	Daz-like|Dazh|Dazl1|Dazla|Tpx-2|Tpx2	deleted in azoospermia-like	protein-coding
unique_peak2-36394-7-6--0.00826409175941478-0.97990265578305	chr2	121354871	121355245	+	0	NA	intron (NM_001290986, intron 8 of 12)	T-rich|Low_complexity|Low_complexity	22599	NM_001290986	241627	Mm.293284	NM_030234	ENSMUSG00000027242	Wdr76	5830411K18Rik|6030457D09|AA517836	WD repeat domain 76	protein-coding
common_peak2-29284-107-133-0.287957742215624-1.00493258909922	chr5	143527273	143528787	+	0	NA	intron (NM_001122730, intron 10 of 18)	intron (NM_001122730, intron 10 of 18)	51036	NM_178242	231861	Mm.354649	NM_178242	ENSMUSG00000039477	Tnrc18	BC025631|EG381742|Zfp469	trinucleotide repeat containing 18	protein-coding
common_peak1-17966-9-10--0.269818212233077-1.05503135781948	chr7	130977270	130977818	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-149151	NM_001252072	628779	Mm.40210	NM_001252072	ENSMUSG00000078591	Hs3st4	EG628779|Gm6915	heparan sulfate (glucosamine) 3-O-sulfotransferase 4	protein-coding
common_peak1-11351-52-39-0.786331895378336-2.13461086968746	chr15	89075082	89076662	+	0	NA	intron (NM_026813, intron 3 of 24)	intron (NM_026813, intron 3 of 24)	33882	NM_027805	71474	Mm.184055	NM_026813	ENSMUSG00000036561	Ppp6r2	1110033O10Rik|8430411H09Rik|B230107H12Rik|Pp6r2|Saps2	protein phosphatase 6, regulatory subunit 2	protein-coding
common_peak2-23766-28-25-0.352519401680371-0.541406350295756	chr15	98595297	98596681	+	0	NA	Intergenic	MTD-int|LTR|MaLR	-2440	NM_007478	11842	Mm.221298	NM_007478	ENSMUSG00000051853	Arf3	5430400P17Rik|AI854770	ADP-ribosylation factor 3	protein-coding
unique_peak1-3685-49-5-3.42132132230403-13.2818807922569	chr19	42631535	42633520	+	0	NA	intron (NM_177464, intron 1 of 6)	intron (NM_177464, intron 1 of 6)	39232	NM_177464	52013	Mm.254169	NM_177464	ENSMUSG00000025184	R3hcc1l	1700036B12Rik|AI450607|C10orf28|D19Ertd386e|GIDRP86|Gidrp88	R3H domain and coiled-coil containing 1 like	protein-coding
unique_peak1-6604-11-1-2.50869358425161-2.83420869758413	chr8	70631042	70631621	+	0	NA	Intergenic	Intergenic	-132858	NM_177698	234353	Mm.32525	NM_027626	ENSMUSG00000030465	Psd3	4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D	pleckstrin and Sec7 domain containing 3	protein-coding
unique_peak2-39031-3-6--1.22133801201688-1.08602067057793	chr8	64726440	64726857	+	0	NA	Intergenic	L1Md_T|LINE|L1	-124658	NM_011922	26359	Mm.42179	NM_011922	ENSMUSG00000031635	Anxa10	-	annexin A10	protein-coding
common_peak2-30675-16-13-0.310908720210457-0.417187467413082	chr7	105395567	105396212	+	0	NA	intron (NM_025408, intron 6 of 10)	Lx9|LINE|L1	-47904	NM_001081167	272411	Mm.98333	NM_001081167	ENSMUSG00000074004	B3gnt6	BC039789|Core-3|Core3	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)	protein-coding
common_peak1-17610-11-12--0.191746133889479-0.310474156842889	chr7	45333353	45333993	+	0	NA	Intergenic	Intergenic	1186231	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak2-22950-8-12--0.695217300193522-0.475924844171029	chr14	50807907	50808401	+	0	NA	Intergenic	Intergenic	-1261	NM_146493	258486	Mm.377529	NM_146493	ENSMUSG00000050431	Olfr730	MOR247-1	olfactory receptor 730	protein-coding
common_peak1-15851-12-30--1.30542032529924-1.80107744087172	chr5	3342687	3343331	+	0	NA	Intergenic	CpG	-1303	NM_009873	12571	Mm.31672	NM_009873	ENSMUSG00000040274	Cdk6	5830411I20|AI504062|Crk2	cyclin-dependent kinase 6	protein-coding
common_peak2-29406-42-78--0.561451420309919-1.25387254443511	chr6	119847452	119849026	+	0	NA	Intergenic	Intergenic	-4477	NM_001166382	19365	Mm.149	NM_011236	ENSMUSG00000030166	Rad52	Rad52yh	RAD52 homolog (S. cerevisiae)	protein-coding
common_peak2-29218-45-51-0.15991830720378-0.398713855155082	chr5	137532813	137533773	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-11363	NM_007457	11769	Mm.833	NM_007457	ENSMUSG00000004849	Ap1s1	AP19	adaptor protein complex AP-1, sigma 1	protein-coding
common_peak1-13783-20-12-0.787635066450101-0.949240599462708	chr2	37881405	37882395	+	0	NA	intron (NM_146122, intron 8 of 21)	intron (NM_146122, intron 8 of 21)	250131	NM_001163566	241324	Mm.392369	NM_001163566	ENSMUSG00000035403	Crb2	5930402A21|BC043114	crumbs homolog 2 (Drosophila)	protein-coding
common_peak2-31334-20-15-0.488074784591193-0.590343908676236	chr8	83698713	83699446	+	0	NA	Intergenic	Intergenic	-160274	NM_027554	74841	Mm.246018	NM_027554	ENSMUSG00000038250	Usp38	4631402N15Rik|4833420O05Rik|AA536967|AU044701|AW544820|mKIAA1891	ubiquitin specific peptidase 38	protein-coding
unique_peak1-3451-11-4-1.18676548936425-1.68134727924692	chr19	8679101	8679619	+	0	NA	exon (NM_001164635, exon 3 of 11)	exon (NM_001164635, exon 3 of 11)	11688	NM_001164635	19879	Mm.285294	NM_031194	ENSMUSG00000063796	Slc22a8	Oat3|Roct	solute carrier family 22 (organic anion transporter), member 8	protein-coding
unique_peak1-4033-12-3-1.64877598508764-2.36932189928148	chr2	51139261	51139922	+	0	NA	intron (NR_040636, intron 1 of 2)	intron (NR_040636, intron 1 of 2)	42240	NR_040636	329404	Mm.417725	NR_040636	ENSMUSG00000086349	Gm13497	A730015I17|OTTMUSG00000012425	predicted gene 13497	ncRNA
common_peak1-8987-49-37-0.758356309581599-1.88758293112676	chr11	59635452	59637201	+	0	NA	intron (NM_011991, intron 8 of 11)	intron (NM_011991, intron 8 of 11)	12744	NR_045686	100504104	Mm.391737	NR_045686	ENSMUSG00000087249	Gm16062	ENSMUSG00000072890|OTTMUSG00000029633	predicted gene 16062	ncRNA
common_peak1-12783-16-25--0.58217607587303-0.633951497070961	chr18	62179972	62180712	+	0	NA	Intergenic	L1Md_F3|LINE|L1	67613	NM_172628	225608	Mm.262320	NM_172628	ENSMUSG00000045629	Sh3tc2	D430044G18Rik	SH3 domain and tetratricopeptide repeats 2	protein-coding
unique_peak2-39121-8-13--0.802132504110034-0.562038191119711	chr8	83651899	83652643	+	0	NA	Intergenic	L1_Mus2|LINE|L1	-113466	NM_027554	74841	Mm.246018	NM_027554	ENSMUSG00000038250	Usp38	4631402N15Rik|4833420O05Rik|AA536967|AU044701|AW544820|mKIAA1891	ubiquitin specific peptidase 38	protein-coding
common_peak2-23738-20-14-0.581184188982674-0.690311289528838	chr15	97560142	97560788	+	0	NA	intron (NM_001168693, intron 1 of 9)	intron (NM_001168693, intron 1 of 9)	1371	NM_001168693	19011	Mm.1001	NM_008902	ENSMUSG00000022468	Endou	Pp11r|Tcl-30	endonuclease, polyU-specific	protein-coding
common_peak2-25911-17-19--0.103631756682325-0.301029995663974	chr19	46305689	46306220	+	0	NA	intron (NM_178930, intron 3 of 39)	L1MD|LINE|L1	-73273	NM_001177369	18034	Mm.102365	NM_019408	ENSMUSG00000025225	Nfkb2	NF-kappaB2|lyt|p49|p49/p100|p50B|p52	nuclear factor of kappa light polypeptide gene enhancer in B cells 2, p49/p100	protein-coding
common_peak1-11315-58-44-0.804096838560822-2.49384873262486	chr15	85040743	85043365	+	0	NA	intron (NM_010180, intron 1 of 16)	intron (NM_010180, intron 1 of 16)	5616	NM_010180	14114	Mm.297992	NM_010180	ENSMUSG00000006369	Fbln1	-	fibulin 1	protein-coding
common_peak2-22036-18-23--0.272043349492805-0.34651636097721	chr12	69241739	69242468	+	0	NA	Intergenic	Intergenic	-471845	NR_033146	100316870	Mm.379794	NR_033146		Gm17821	-	DDB1 and CUL4 associated factor 5 pseudogene	pseudo
common_peak1-16090-48-38-0.685524932372566-1.65883209269362	chr5	64701404	64702663	+	0	NA	intron (NM_019636, intron 12 of 19)	RSINE1|SINE|B4	80437	NM_001289514	57915	Mm.286353	NM_019636	ENSMUSG00000029174	Tbc1d1	1110062G02Rik|AI385682|AW555803|Tbc1|mKIAA1108	TBC1 domain family, member 1	protein-coding
unique_peak1-4102-8-4-0.683294323060208-1.21878474469819	chr2	75622995	75623506	+	0	NA	Intergenic	Intergenic	-46984	NM_172666	228061	Mm.31227	NM_172666	ENSMUSG00000042410	Agps	5832437L22|9930035G10Rik|AW123847|Adaps|Adas|Adhaps|Adps|Aldhpsy|bs2	alkylglycerone phosphate synthase	protein-coding
common_peak1-9635-73-103--0.00804471171587018-0.301029995663957	chr12	44268512	44269891	+	0	NA	Intergenic	Intergenic	1041854	NM_013760	27362	Mm.27432	NM_013760	ENSMUSG00000014905	Dnajb9	AA408011|AA673251|AA673481|AW556981|ERdj4|Mdg1|mDj7	DnaJ (Hsp40) homolog, subfamily B, member 9	protein-coding
unique_peak2-35001-11-10-0.0492619656143161-0.31137425193576	chr15	99819746	99820275	+	0	NA	intron (NM_001284521, intron 4 of 15)	intron (NM_001284521, intron 4 of 15)	-16292	NR_028124	70281	Mm.484037	NR_028124		2310068J16Rik	-	RIKEN cDNA 2310068J16 gene	ncRNA
common_peak1-15336-24-38--0.492192316094532-0.631311512744354	chr4	48042686	48043586	+	0	NA	Intergenic	Intergenic	-20984	NM_015743	18124	Mm.247261	NM_015743	ENSMUSG00000028341	Nr4a3	AI573420|CHN|CSMF|MINOR|NOR-1|Nor1|TEC	nuclear receptor subfamily 4, group A, member 3	protein-coding
unique_peak2-33601-1-4--1.94898510510411-1.10720996964787	chr11	92850742	92851128	+	0	NA	Intergenic	Intergenic	-109669	NM_028296	72605	Mm.342160	NM_028296	ENSMUSG00000056158	Car10	2700029L05Rik|BB085816|Ca10	carbonic anhydrase 10	protein-coding
unique_peak1-5093-6-1-1.5653981103803-1.56314192529759	chr4	149403237	149403609	+	0	NA	Intergenic	Intergenic	-20291	NM_173371	100198	Mm.22183	NM_173371	ENSMUSG00000028980	H6pd	AI785303|G6pd1|Gpd-1|Gpd1	hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase)	protein-coding
unique_peak1-6407-9-2-1.60465090568306-1.87199725847353	chr7	80835756	80836273	+	0	NA	Intergenic	Intergenic	-4565	NR_033604	244061	Mm.484605	NR_033604		Gm4971	EG244061	Smad nuclear interacting protein 1 pseudogene	pseudo
common_peak2-30132-48-26-1.21603964907135-3.744750681178	chr6	138140320	138141642	+	0	NA	Intergenic	Intergenic	51923	NM_019946	56615	Mm.14796	NM_019946	ENSMUSG00000008540	Mgst1	1500002K10Rik|Gst	microsomal glutathione S-transferase 1	protein-coding
unique_peak2-37984-2-9--2.23938235115068-1.87199725847353	chr6	15727786	15728228	+	0	NA	intron (NM_175088, intron 4 of 4)	intron (NM_175088, intron 4 of 4)	57346	NM_175088	16543	Mm.1314	NM_175088	ENSMUSG00000041390	Mdfic	Kdt1|Mdfid	MyoD family inhibitor domain containing	protein-coding
unique_peak1-7372-9-5-0.604650905683064-1.21398586181642	chrX	54043206	54043671	+	0	NA	intron (NM_001287800, intron 4 of 5)	intron (NM_001287800, intron 4 of 5)	3734	NM_001287800	14199	Mm.3126	NM_010211	ENSMUSG00000023092	Fhl1	FHL-1|KyoT|RAM14-1|SLIM|SLIM-1	four and a half LIM domains 1	protein-coding
common_peak1-16065-41-56--0.131741309316081-0.333207316140145	chr5	51551725	51553112	+	0	NA	Intergenic	Intergenic	392742	NR_027710	19017	Mm.259072	NM_008904	ENSMUSG00000029167	Ppargc1a	A830037N07Rik|ENSMUSG00000079510|Gm11133|PGC-1|PGC-1v|Pgc-1alpha|Pgc1|Pgco1|Ppargc1	peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	protein-coding
common_peak2-25803-7-7--0.200909169701811-0.97990265578305	chr19	37820833	37821140	+	0	NA	Intergenic	L1Md_F2|LINE|L1	48688	NM_007811	13082	Mm.42230	NM_007811	ENSMUSG00000024987	Cyp26a1	Cyp26|P450RA|P450RAI|RAH	cytochrome P450, family 26, subfamily a, polypeptide 1	protein-coding
common_peak2-23776-32-67--0.808370822030679-1.92631927296918	chr15	98992691	98993866	+	0	NA	intron (NM_139140, intron 2 of 12)	RLTR45|LTR|ERVK	36002	NM_139140	72572	Mm.276650	NM_139140	ENSMUSG00000051934	Spats2	2700012F11Rik|59kDa|Scr59|p59	spermatogenesis associated, serine-rich 2	protein-coding
unique_peak2-39265-5-10--1.16381195464315-1.33892459842472	chr8	120225266	120225779	+	0	NA	promoter-TSS (NM_008290)	promoter-TSS (NM_008290)	-324	NM_008290	15486	Mm.276466	NM_008290	ENSMUSG00000031844	Hsd17b2	AI194836|AI194967|AI255511	hydroxysteroid (17-beta) dehydrogenase 2	protein-coding
common_peak2-31031-28-47--0.532003380899694-0.835790028376013	chr8	13338775	13339641	+	0	NA	intron (NM_009361, intron 1 of 11)	CpG	404	NM_009361	21781	Mm.925	NM_009361	ENSMUSG00000038482	Tfdp1	Dp1|Drtf1	transcription factor Dp 1	protein-coding
common_peak2-25880-20-30--0.466121525795682-0.569352520859861	chr19	44247549	44248382	+	0	NA	intron (NM_181422, intron 2 of 14)	intron (NM_181422, intron 2 of 14)	18967	NM_181422	329064	Mm.308481	NM_181422	ENSMUSG00000037578	Pkd2l1	B830002B15|BC046386|PCL|PKD2L|Pkdl|TRPP3	polycystic kidney disease 2-like 1	protein-coding
common_peak1-10398-5-12--1.40482005414695-1.62698961692433	chr13	97137389	97137868	+	0	NA	Intergenic	B4A|SINE|B4	-20621	NM_026173	67463	Mm.86472	NM_026173	ENSMUSG00000021671	Poc5	1200014M14Rik|AV144706	POC5 centriolar protein homolog (Chlamydomonas)	protein-coding
unique_peak2-36764-1-8--2.79698201165906-2.05605744720049	chr3	65345580	65346074	+	0	NA	intron (NM_178892, intron 2 of 5)	intron (NM_178892, intron 2 of 5)	-12491	NR_027955	71004	Mm.475465	NM_001033527	ENSMUSG00000074580	4931440P22Rik	-	RIKEN cDNA 4931440P22 gene	ncRNA
unique_peak2-34665-14-14--0.00767443525087419-0.308519316180257	chr15	98762417	98763166	+	0	NA	exon (NM_011654, exon 4 of 4)	exon (NM_011654, exon 4 of 4)	2030	NM_011654	22143	Mm.392113	NM_011654	ENSMUSG00000023004	Tuba1b	Tuba2	tubulin, alpha 1B	protein-coding
common_peak2-24375-10-24--1.28744084476596-1.59083646988122	chr17	8508475	8509133	+	0	NA	intron (NM_134114, intron 1 of 7)	intron (NM_134114, intron 1 of 7)	-4821	NR_073374	75060	Mm.426530	NR_073374	ENSMUSG00000087478	4930506C21Rik	-	RIKEN cDNA 4930506C21 gene	ncRNA
common_peak2-28645-16-22--0.405298313788951-0.440610794044987	chr5	30232656	30233342	+	0	NA	intron (NR_105781, intron 1 of 2)	ORR1A1-int|LTR|MaLR	-106702	NM_031168	16193	Mm.1019	NM_031168	ENSMUSG00000025746	Il6	Il-6	interleukin 6	protein-coding
unique_peak2-36217-0-5--3.42509343119537-1.32905871926422	chr2	35272009	35272405	+	0	NA	intron (NM_010283, intron 4 of 8)	intron (NM_010283, intron 4 of 8)	-19513	NM_001272040	74854	Mm.159338	NM_001080709	ENSMUSG00000079421	4930402F06Rik	-	RIKEN cDNA 4930402F06 gene	protein-coding
unique_peak1-356-24-8-1.6232849013254-2.85636458546265	chr1	136561406	136562535	+	0	NA	intron (NM_009307, intron 2 of 9)	L1Md_F2|LINE|L1	18712	NM_009307	20980	Mm.5102	NM_009307	ENSMUSG00000026452	Syt2	R74640|mKIAA4194	synaptotagmin II	protein-coding
common_peak1-15230-12-14--0.25811461052088-0.309074325783021	chr4	3835220	3835860	+	0	NA	intron (NM_019969, intron 4 of 5)	intron (NM_019969, intron 4 of 5)	30012	NM_019969	56711	Mm.331467	NM_019969	ENSMUSG00000003282	Plag1	-	pleiomorphic adenoma gene 1	protein-coding
common_peak2-27815-7-6--0.00826409175941478-0.97990265578305	chr3	145102265	145102700	+	0	NA	intron (NM_027770, intron 28 of 59)	intron (NM_027770, intron 28 of 59)	-136690	NM_001081094	229937	Mm.24586	NM_001081094	ENSMUSG00000074182	Znhit6	2410019A14Rik	zinc finger, HIT type 6	protein-coding
common_peak2-29273-21-40--0.788062739351848-1.17890083738706	chr5	142818008	142818879	+	0	NA	Intergenic	RMER17C-int|LTR|ERVK	-59008	NM_199068	17425	Mm.24214	NM_010812	ENSMUSG00000056493	Foxk1	A630048H08Rik|AI463295|ENSMUSG00000075577|Gm10868|Mnf	forkhead box K1	protein-coding
common_peak2-21127-21-28--0.288491729861336-0.367910579842127	chr11	54028163	54028944	+	0	NA	Intergenic	Intergenic	-1763	NR_045506	71056	Mm.56332	NR_045506	ENSMUSG00000086209	4933405E24Rik	-	RIKEN cDNA 4933405E24 gene	ncRNA
unique_peak2-37426-8-15--0.994777582052429-0.771068449301683	chr4	149773531	149774239	+	0	NA	intron (NM_001085492, intron 1 of 22)	B3A|SINE|B2	117860	NM_001085492	68703	Mm.291274	NM_001085492	ENSMUSG00000039852	Rere	1110033A15Rik|AI414665|ARG|ARP|ATN1L|AW742570|Atr2|DNB1|eye<m03Jus>|eyes3|mKIAA0458	arginine glutamic acid dipeptide (RE) repeats	protein-coding
unique_peak2-36392-4-6--0.830815435910851-0.989110657569874	chr2	120731739	120732076	+	0	NA	intron (NM_009461, intron 29 of 46)	B1_Mur2|SINE|Alu	55515	NR_038350	100502700	Mm.330516	NR_038349	ENSMUSG00000087519	AV039307	-	expressed sequence AV039307	ncRNA
unique_peak2-37261-2-5--1.50241675698448-1.08602067057793	chr4	106936468	106936888	+	0	NA	intron (NM_028394, intron 2 of 5)	intron (NM_028394, intron 2 of 5)	10139	NM_028394	72938	Mm.21787	NM_028394	ENSMUSG00000063172	Hspb11	2900042B11Rik|IFT25	heat shock protein family B (small), member 11	protein-coding
unique_peak1-5759-9-3-1.18961340640422-1.57096726280955	chr6	51172477	51172795	+	0	NA	Intergenic	Intergenic	47273	NR_029719	387166		NR_029719	miRBase:MI0000550	Mir148a	Mirn148|Mirn148a	microRNA 148a	ncRNA
unique_peak1-1145-9-4-0.867685311516858-1.36011389749466	chr11	97806267	97806845	+	0	NA	intron (NM_028199, intron 7 of 13)	intron (NM_028199, intron 7 of 13)	41204	NM_028199	72324	Mm.39617	NM_028199	ENSMUSG00000017417	Plxdc1	2410003I07Rik|AI848450|Tem7	plexin domain containing 1	protein-coding
common_peak1-18907-14-17--0.270708841084668-0.328191099940267	chr9	41207431	41208128	+	0	NA	intron (NR_040725, intron 3 of 4)	intron (NR_040725, intron 3 of 4)	23135	NR_040725	73144	Mm.482850	NR_040725		3110039I08Rik	-	RIKEN cDNA 3110039I08 gene	ncRNA
common_peak2-32037-9-10--0.269818212233077-1.05503135781948	chr9	78211824	78212364	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	3912	NM_025274	434423	Mm.139314	NM_025274	ENSMUSG00000060461	Dppa5a	AA536857|Dppa5|Esg1|ecat2	developmental pluripotency associated 5A	protein-coding
common_peak2-22177-94-143--0.040335433592996-0.307935867653631	chr12	101975160	101976681	+	0	NA	Intergenic	(T)n|Simple_repeat|Simple_repeat	-12682	NM_153587	73086	Mm.220417	NM_153587	ENSMUSG00000021180	Rps6ka5	3110005L17Rik|6330404E13Rik|AI854034|MSK1|MSPK1|RLPK	ribosomal protein S6 kinase, polypeptide 5	protein-coding
common_peak1-16844-22-21-0.187852486450107-0.376654945067947	chr6	52825881	52826702	+	0	NA	intron (NM_173406, intron 2 of 4)	intron (NM_173406, intron 2 of 4)	33323	NM_001168277	231986	Mm.386865	NM_173406		Jazf1	AI591476|C820002C15|Jaz1|Tip27	JAZF zinc finger 1	protein-coding
common_peak2-31403-18-14-0.406028555619833-0.532159081577619	chr8	90908631	90909383	+	0	NA	Intergenic	Intergenic	-22917	NM_012047	26992	Mm.5400	NM_012047		Brd7	BP75|CELTIX1|Ptpn13ip	bromodomain containing 7	protein-coding
common_peak1-9586-12-22--0.874785970969374-0.809260849721102	chr11	119040618	119041153	+	0	NA	intron (NM_172443, intron 3 of 11)	ORR1D1|LTR|MaLR	-25434	NR_105899	102465563		NR_105899		Mir6934	mmu-mir-6934	microRNA mir-6934	ncRNA
common_peak2-28519-15-35--1.15776025088666-1.87578206828671	chr5	92962000	92963340	+	0	NA	Intergenic	RMER16-int|LTR|ERVK	-28036	NM_007644	12492	Mm.297964	NM_007644	ENSMUSG00000029426	Scarb2	9330185J12Rik|Cd36l2|LGP85|LIMP-2|MLGP85	scavenger receptor class B, member 2	protein-coding
unique_peak1-3376-24-6-1.98585498071011-3.65509904868667	chr19	3668516	3669645	+	0	NA	intron (NM_008513, intron 1 of 22)	intron (NM_008513, intron 1 of 22)	17484	NM_008513	16973	Mm.274581	NM_008513	ENSMUSG00000024913	Lrp5	BMND1|HBM|LR3|LRP7|OPPG|mKIAA4142	low density lipoprotein receptor-related protein 5	protein-coding
common_peak2-28136-7-8--0.370834171144123-1.00793137938329	chr4	97869247	97869672	+	0	NA	Intergenic	ORR1E-int|LTR|MaLR	180497	NM_053157	94043	Mm.331719	NM_053157	ENSMUSG00000028563	Tm2d1	2310026L18Rik|AA990549|Bbp	TM2 domain containing 1	protein-coding
unique_peak2-34641-0-7--3.84013093047421-1.80617997398389	chr14	101782058	101782460	+	0	NA	Intergenic	Intergenic	-182973	NM_029680	76627	Mm.31415	NM_029680	ENSMUSG00000042888	Prr30	1700110M21Rik	proline rich 30	protein-coding
common_peak2-24761-9-7-0.18961340640422-1.05908390183068	chr17	56110814	56111224	+	0	NA	exon (NM_009168, exon 2 of 7)	exon (NM_009168, exon 2 of 7)	1114	NM_009168	20420	Mm.20908	NM_009168	ENSMUSG00000039154	Shd	AI413439	src homology 2 domain-containing transforming protein D	protein-coding
common_peak1-10065-8-31--1.99477758205243-3.44661255732379	chr13	21810444	21811072	+	0	NA	TTS (NM_178206)	TTS (NM_178206)	1261	NM_178206	319152	Mm.377874	NM_178206	ENSMUSG00000069312	Hist1h3h	H3-291	histone cluster 1, H3h	protein-coding
common_peak2-27084-40-19-1.33704758786374-3.59866429024318	chr3	89685637	89686202	+	0	NA	intron (NM_010559, intron 6 of 9)	intron (NM_010559, intron 6 of 9)	31165	NM_010559	16194	Mm.2856	NM_010559	ENSMUSG00000027947	Il6ra	CD126|IL-6R|Il6r	interleukin 6 receptor, alpha	protein-coding
unique_peak2-37879-5-8--0.874305337448166-1.10484139239135	chr5	139118945	139119389	+	0	NA	Intergenic	Intergenic	55080	NM_183025	243308	Mm.36612	NM_183025	ENSMUSG00000056014	A430033K04Rik	C86988	RIKEN cDNA A430033K04 gene	protein-coding
common_peak1-19062-66-106--0.222983321975305-0.516163299205869	chr9	69397545	69398772	+	0	NA	Intergenic	Intergenic	93407	NR_037296	100526560		NR_037296	miRBase:MI0014106	Mir3109	mmu-mir-3109	microRNA 3109	ncRNA
common_peak1-19047-57-77--0.0193691787833199-0.301029995663951	chr9	65550446	65551957	+	0	NA	exon (NM_172536, exon 5 of 10)	exon (NM_172536, exon 5 of 10)	26846	NM_001301307	18247	Mm.116749	NM_010952	ENSMUSG00000040652	Oaz2	AZ-2|AZ2|Oaz2-ps|Sez15	ornithine decarboxylase antizyme 2	protein-coding
unique_peak1-1040-11-1-2.50869358425161-2.83420869758413	chr11	76904812	76905295	+	0	NA	intron (NM_176965, intron 17 of 17)	B1F|SINE|Alu	-13114	NM_001012309	237859	Mm.156195	NM_001012309	ENSMUSG00000037958	Ccdc55	8030451K07|AI851076|AL022898|NSpr70|NSrp70|Nsrp1	coiled-coil domain containing 55	protein-coding
common_peak1-7811-27-23-0.40658345017408-0.622271369641148	chr1	121326879	121327929	+	0	NA	Intergenic	Intergenic	-8579	NM_008381	16324	Mm.3092	NM_008381	ENSMUSG00000037035	Inhbb	-	inhibin beta-B	protein-coding
unique_peak2-35963-6-13--1.2419568116773-1.58711810488664	chr19	17263751	17264296	+	0	NA	intron (NM_181348, intron 11 of 19)	L1VL2|LINE|L1	149972	NM_001136484	14537	Mm.244825	NM_010265	ENSMUSG00000038843	Gcnt1	5630400D21Rik|B130048E03|C2 GlcNAcT|C2GNT|IGnT	glucosaminyl (N-acetyl) transferase 1, core 2	protein-coding
common_peak2-23007-13-16--0.30899081061257-0.330004445983672	chr14	61648992	61649633	+	0	NA	intron (NM_013869, intron 1 of 9)	intron (NM_013869, intron 1 of 9)	7512	NM_001164155	29820	Mm.281356	NM_013869	ENSMUSG00000060548	Tnfrsf19	AL023044|AW123854|TAJ|TAJ-ALPHA|TRADE|Troy	tumor necrosis factor receptor superfamily, member 19	protein-coding
unique_peak2-37425-7-15--1.20090916970181-0.947446088118041	chr4	149737413	149738134	+	0	NA	intron (NM_001085492, intron 1 of 22)	intron (NM_001085492, intron 1 of 22)	81748	NM_001085492	68703	Mm.291274	NM_001085492	ENSMUSG00000039852	Rere	1110033A15Rik|AI414665|ARG|ARP|ATN1L|AW742570|Atr2|DNB1|eye<m03Jus>|eyes3|mKIAA0458	arginine glutamic acid dipeptide (RE) repeats	protein-coding
common_peak2-30857-9-11--0.395349094316936-0.344532117358383	chr7	139212520	139212965	+	0	NA	Intergenic	MLT1K|LTR|MaLR	54599	NM_173410	233919	Mm.208740	NM_173410		Gpr26	9630036A11Rik|A730021D22	G protein-coupled receptor 26	protein-coding
common_peak1-16415-65-74-0.263347248981247-0.6405313143659	chr5	129019090	129021281	+	0	NA	Intergenic	Intergenic	-81248	NM_172885	243274	Mm.447698	NM_172885	ENSMUSG00000034310	Tmem132d	C630028F04Rik	transmembrane protein 132D	protein-coding
unique_peak1-6860-8-1-2.00522241794757-2.05605744720049	chr8	86623375	86623868	+	0	NA	intron (NM_172502, intron 6 of 12)	intron (NM_172502, intron 6 of 12)	5040	NM_172502	212123	Mm.260557	NM_172502	ENSMUSG00000037103	Dcaf15	6720484B16	DDB1 and CUL4 associated factor 15	protein-coding
unique_peak2-36780-11-19--0.813234510635749-0.769930178837768	chr3	75942598	75943428	+	0	NA	intron (NM_001253719, intron 1 of 15)	L1_Rod|LINE|L1	63508	NM_001253719	213262	Mm.379337	NM_178673	ENSMUSG00000034098	Fstl5	9130207J01Rik	follistatin-like 5	protein-coding
common_peak2-26832-48-39-0.648999056347452-1.53884632328361	chr2	152819566	152820989	+	0	NA	intron (NM_001083618, intron 10 of 14)	L1MC|LINE|L1	20842	NM_178939	68559	Mm.12746	NM_178939	ENSMUSG00000027472	Pdrg1	1110004D19Rik|AU020945|AV006589|Pdrg	p53 and DNA damage regulated 1	protein-coding
unique_peak1-4640-20-0-4.48807478459119-NA	chr3	87763095	87763877	+	0	NA	Intergenic	Intergenic	10871	NM_007759	12904	Mm.4757	NM_007759	ENSMUSG00000004885	Crabp2	AI893628|Crabp-2|CrabpII	cellular retinoic acid binding protein II	protein-coding
common_peak2-26092-21-38--0.715912953596013-0.993451450456403	chr2	166805434	166806225	+	0	NA	intron (NM_011490, intron 1 of 11)	URR1B|DNA|MER1_type	-15612	NR_111895	20853	Mm.73276	NM_011490	ENSMUSG00000039536	Stau1	5830401L18Rik|AW549911|C85792|Stau	staufen (RNA binding protein) homolog 1 (Drosophila)	protein-coding
common_peak1-9214-25-19-0.539921810457743-0.756750750680359	chr11	83455384	83456442	+	0	NA	Intergenic	RMER17C-int|LTR|ERVK	6967	NM_011337	20302	Mm.1282	NM_011337	ENSMUSG00000000982	Ccl3	AI323804|G0S19-1|LD78alpha|MIP-1alpha|MIP1-(a)|MIP1-alpha|Mip1a|Scya3	chemokine (C-C motif) ligand 3	protein-coding
common_peak1-14978-9-4-0.867685311516858-1.36011389749466	chr3	106788825	106789364	+	0	NA	Intergenic	Intergenic	-49986	NM_008418	16491	Mm.30640	NM_008418	ENSMUSG00000047959	Kcna3	Kca1-3|Kv1.3|Mk-3	potassium voltage-gated channel, shaker-related subfamily, member 3	protein-coding
common_peak2-19732-19-21--0.0567442919756109-0.301029995663971	chr1	72711332	72711888	+	0	NA	intron (NM_176980, intron 13 of 23)	intron (NM_176980, intron 13 of 23)	35528	NM_176980	319695	Mm.249056	NM_176980	ENSMUSG00000039342	Ankar	4932422E22Rik	ankyrin and armadillo repeat containing	protein-coding
unique_peak1-6009-8-1-2.00522241794757-2.05605744720049	chr6	108274294	108274786	+	0	NA	intron (NM_010585, intron 4 of 61)	MTEb|LTR|MaLR	111450	NM_010585	16438	Mm.227912	NM_010585	ENSMUSG00000030102	Itpr1	D6Pas2|ENSMUSG00000072853|Gm10429|IP3R1|InsP3R|Ip3r|Itpr-1|P400|Pcp-1|Pcp1|opt	inositol 1,4,5-trisphosphate receptor 1	protein-coding
unique_peak2-33998-0-5--3.42509343119537-1.32905871926422	chr12	87902776	87903118	+	0	NA	Intergenic	CT-rich|Low_complexity|Low_complexity	-116703	NM_177354	238328	Mm.216101	NM_177354		Vash1	AI834978|D930046M13Rik|G630009D10Rik	vasohibin 1	protein-coding
unique_peak1-1289-23-6-1.91441258245148-3.22740510021752	chr11	118458940	118460027	+	0	NA	intron (NM_001285436, intron 3 of 13)	intron (NM_001285436, intron 3 of 13)	121209	NM_172573	217364	Mm.473963	NM_172573	ENSMUSG00000033857	Engase	C130099A03|D230014K01Rik	endo-beta-N-acetylglucosaminidase	protein-coding
common_peak1-15953-34-14-1.47517793139275-3.48244293670685	chr5	30618252	30619277	+	0	NA	intron (NM_001033460, intron 1 of 16)	intron (NM_001033460, intron 1 of 16)	10850	NM_001033460	381738	Mm.389604	NM_001033460	ENSMUSG00000073102	Drc1	Ccdc164|Gm1060|b2b1654Clo	dynein regulatory complex subunit 1	protein-coding
unique_peak1-580-14-2-2.31425365963649-3.28500101358144	chr10	7118340	7119187	+	0	NA	Intergenic	RLTR22_Mus|LTR|ERVK	39993	NM_001204916	670558	Mm.398582	NM_001204916	ENSMUSG00000091618	H60c	4632413I24Rik|Gm9491	histocompatibility 60c	protein-coding
common_peak2-23381-7-7--0.200909169701811-0.97990265578305	chr15	57761704	57762067	+	0	NA	intron (NM_001081396, intron 4 of 20)	(TCTA)n|Simple_repeat|Simple_repeat	18131	NM_001167679	210544	Mm.390835	NM_199300	ENSMUSG00000022364	Tbc1d31	4B3|D330013L20Rik|Gm85|Wdr67	TBC1 domain family, member 31	protein-coding
common_peak1-12109-8-8--0.164702583494742-1.00793137938329	chr17	26534020	26534475	+	0	NA	Intergenic	(TC)n|Simple_repeat|Simple_repeat	-17663	NM_001081656	240055	Mm.133211	NM_001081656	ENSMUSG00000034413	Neurl1b	C230078M08Rik|EG240055	neuralized homolog 1b (Drosophila)	protein-coding
unique_peak2-34296-6-6--0.241956811677302-0.947717972411649	chr13	75789710	75790150	+	0	NA	Intergenic	ID_B1|SINE|B4	7436	NR_030451	751556		NR_030451	miRBase:MI0004644	Mir682	Mirn682|mir-682|mmu-mir-682	microRNA 682	ncRNA
common_peak1-11205-17-20--0.174021084573723-0.306598483909156	chr15	78078215	78079111	+	0	NA	intron (NM_008677, intron 1 of 9)	intron (NM_008677, intron 1 of 9)	3422	NM_008677	17972	Mm.2068	NM_008677	ENSMUSG00000071715	Ncf4	AI451400|p40phox	neutrophil cytosolic factor 4	protein-coding
unique_peak2-38935-5-11--1.28934283672701-1.477227296591	chr8	24569191	24569652	+	0	NA	Intergenic	Intergenic	47447	NM_013834	20377	Mm.281691	NM_013834	ENSMUSG00000031548	Sfrp1	2210415K03Rik|AW011917|AW107218|AW742929|sFRP-1	secreted frizzled-related protein 1	protein-coding
common_peak1-19293-32-28-0.421111024092088-0.694972475810963	chr9	120739278	120740730	+	0	NA	Intergenic	Arthur1B|DNA|Tip100	84364	NR_040742	76402	Mm.436588	NR_040742		1700020M21Rik	-	RIKEN cDNA 1700020M21 gene	ncRNA
unique_peak2-34112-8-27--1.80213250411003-2.66623981987189	chr13	21721374	21721920	+	0	NA	Intergenic	ORR1A3|LTR|MaLR	9743	NM_146542	218066	Mm.484775	NM_146542	ENSMUSG00000036658	Olfr11	M49|MOR256-11|ORL121	olfactory receptor 11	protein-coding
unique_peak1-4304-21-4-2.24756117037887-3.74275476306371	chr2	146535313	146536130	+	0	NA	Intergenic	PB1|SINE|Alu	-145904	NM_001033298	228730	Mm.292352	NM_001033298	ENSMUSG00000074749	Kiz	Gm114|Ncrna00153|Plk1s1	kizuna centrosomal protein	protein-coding
unique_peak2-35162-4-6--0.830815435910851-0.989110657569874	chr16	34082270	34082606	+	0	NA	intron (NM_177357, intron 34 of 59)	intron (NM_177357, intron 34 of 59)	-115349	NM_009471	22247	Mm.13145	NM_009471	ENSMUSG00000022814	Umps	1700095D23Rik|AA408257|AL033308|BB164745	uridine monophosphate synthetase	protein-coding
common_peak1-16386-22-30--0.30691220529947-0.399869693390336	chr5	123748626	123749536	+	0	NA	Intergenic	Intergenic	-45376	NM_029850	77045	Mm.151960	NM_029850	ENSMUSG00000029438	Bcl7a	4432415N06Rik|AI448316	B cell CLL/lymphoma 7A	protein-coding
unique_peak2-38866-2-5--1.50241675698448-1.08602067057793	chr7	145246389	145246791	+	0	NA	Intergenic	Intergenic	342823	NM_183289	70571	Mm.334297	NM_183289	ENSMUSG00000091002	Tcerg1l	5730476P14Rik	transcription elongation regulator 1-like	protein-coding
unique_peak2-34670-15-51--1.68827496758544-4.47502662768491	chr15	5243502	5245331	+	0	NA	Intergenic	Intergenic	-50229	NM_008965	19219	Mm.18509	NM_008965	ENSMUSG00000039942	Ptger4	EP4|Ptgerep4	prostaglandin E receptor 4 (subtype EP4)	protein-coding
common_peak2-31230-19-34--0.72659569028328-0.974620203848502	chr8	69973712	69974397	+	0	NA	Intergenic	Intergenic	-40603	NM_008673	17960	Mm.14125	NM_008673	ENSMUSG00000025588	Nat1	Nat-1	N-acetyl transferase 1	protein-coding
common_peak1-8309-22-27--0.160070816970199-0.317737750275047	chr10	40338557	40339490	+	0	NA	Intergenic	Lx8|LINE|L1	-10794	NM_027442	70503	Mm.252862	NM_027442	ENSMUSG00000063428	Ddo	5330420D20Rik|5730402C02Rik|AI467244	D-aspartate oxidase	protein-coding
common_peak2-22659-22-31--0.352715894912595-0.440892966163086	chr13	95374717	95375633	+	0	NA	Intergenic	Intergenic	-183723	NM_009321	21371	Mm.379025	NM_009321	ENSMUSG00000042043	Tbca	Tbca13	tubulin cofactor A	protein-coding
common_peak1-14197-120-102-0.866461093308531-5.92320252880872	chr2	148038043	148041054	+	0	NA	Intergenic	Lx4A|LINE|L1	-166843	NM_010446	15376	Mm.938	NM_010446	ENSMUSG00000037025	Foxa2	HNF3-beta|HNF3beta|Hnf-3b|Hnf3b|Tcf-3b|Tcf3b	forkhead box A2	protein-coding
common_peak2-20612-20-18-0.240147271147608-0.388034239052786	chr10	80072382	80072925	+	0	NA	TTS (NR_105877)	TTS (NR_105877)	648	NR_105877	102465550		NR_105877		Mir6912	mmu-mir-6912	microRNA mir-6912	ncRNA
common_peak1-18180-22-9-1.32535601020004-2.00244947055753	chr8	14969305	14970477	+	0	NA	intron (NM_172751, intron 18 of 28)	intron (NM_172751, intron 18 of 28)	-41134	NM_029116	74901	Mm.46675	NM_029116	ENSMUSG00000055675	Kbtbd11	2900016B01Rik|4930465M17Rik|mKIAA0711	kelch repeat and BTB (POZ) domain containing 11	protein-coding
common_peak1-16696-10-9-0.0344872501214071-1.05503135781948	chr6	17353317	17353783	+	0	NA	Intergenic	Intergenic	-60407	NM_008591	17295	Mm.86844	NM_008591	ENSMUSG00000009376	Met	AI838057|HGF|HGFR|Par4|c-Met	met proto-oncogene	protein-coding
common_peak1-15681-27-37--0.256381562548349-0.379775532323854	chr4	137993177	137994221	+	0	NA	intron (NM_026689, intron 2 of 3)	intron (NM_026689, intron 2 of 3)	3112	NM_026689	68350	Mm.103413	NM_026689	ENSMUSG00000041241	Mul1	0610009K11Rik|AV000801|Gide	mitochondrial ubiquitin ligase activator of NFKB 1	protein-coding
common_peak2-22376-9-12--0.510826311736872-0.394412252720706	chr13	30109729	30110197	+	0	NA	Intergenic	Intergenic	-32031	NM_010093	13557	Mm.268356	NM_010093	ENSMUSG00000016477	E2f3	E2F3b|E2f3a	E2F transcription factor 3	protein-coding
common_peak2-21398-24-25-0.0927701846266249-0.337923771396236	chr11	80810077	80810997	+	0	NA	intron (NM_001034013, intron 1 of 9)	intron (NM_001034013, intron 1 of 9)	138646	NM_029367	75622	Mm.26988	NM_029367	ENSMUSG00000053184	Spaca3	1700025M08Rik|ALLP17|Lyc3|SLLP1|mSLLP1	sperm acrosome associated 3	protein-coding
common_peak2-28214-22-37--0.600643408356181-0.808568985218824	chr4	118228796	118230180	+	0	NA	intron (NM_026789, intron 21 of 21)	(GCTG)n|Simple_repeat|Simple_repeat	-13157	NM_172383	230678	Mm.23639	NM_172383	ENSMUSG00000050854	Tmem125	6330530A05Rik|AV223516	transmembrane protein 125	protein-coding
unique_peak1-2218-9-4-0.867685311516858-1.36011389749466	chr15	73535583	73536136	+	0	NA	intron (NM_173365, intron 1 of 1)	MIRb|SINE|MIR	2076	NM_173365	239530	Mm.122997	NM_173365	ENSMUSG00000045281	Gpr20	A430106B11Rik	G protein-coupled receptor 20	protein-coding
common_peak2-29915-11-5-0.923731083530457-1.477227296591	chr6	115477242	115477544	+	0	NA	Intergenic	Intergenic	-17329	NM_199033	381802	Mm.291208	NM_199033	ENSMUSG00000042389	Tsen2	AU067695	tRNA splicing endonuclease 2 homolog (S. cerevisiae)	protein-coding
common_peak2-29480-15-16--0.075298090694683-0.301029995663976	chr6	31086068	31086795	+	0	NA	intron (NR_110471, intron 3 of 3)	intron (NR_110471, intron 3 of 3)	-73338	NR_029532	387223		NR_029532	miRBase:MI0000143	Mir29b-1	Mirn29b|Mirn29b-1	microRNA 29b-1	ncRNA
common_peak2-31538-8-7-0.00522241794757061-1.00793137938329	chr8	111237466	111237945	+	0	NA	promoter-TSS (NM_007496)	promoter-TSS (NM_007496)	-839	NM_007496	11906	Mm.416972	NM_007496	ENSMUSG00000038872	Zfhx3	A230102L03Rik|Atbf1|WBP9|mKIAA4228	zinc finger homeobox 3	protein-coding
unique_peak2-38165-3-7--1.41398308995928-1.23214870625617	chr6	88446134	88446539	+	0	NA	intron (NM_019685, intron 9 of 10)	intron (NM_019685, intron 9 of 10)	22458	NM_016906	53421	Mm.28375	NM_016906	ENSMUSG00000030082	Sec61a1	AA408394|AA410007|Sec61a	Sec61 alpha 1 subunit (S. cerevisiae)	protein-coding
common_peak1-14643-31-17-1.05531366937081-1.94848218498813	chr3	57300995	57302354	+	0	NA	intron (NM_133784, intron 3 of 6)	B1F|SINE|Alu	72342	NM_145539	229302	Mm.26618	NM_145539	ENSMUSG00000027801	Tm4sf4	Iltmp	transmembrane 4 superfamily member 4	protein-coding
common_peak1-15991-12-18--0.599151528355947-0.476916024233333	chr5	32853750	32854313	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-59513	NM_001205133	22612	Mm.4558	NM_009535	ENSMUSG00000014932	Yes1	Yes|p61-Yes	Yamaguchi sarcoma viral (v-yes) oncogene homolog 1	protein-coding
common_peak2-22214-12-23--0.936186515633517-0.912223620338476	chr12	112644724	112645600	+	0	NA	intron (NM_001101503, intron 1 of 3)	intron (NM_001101503, intron 1 of 3)	142	NM_001101503	380787	Mm.125602	NM_001101503	ENSMUSG00000087075	A230065H16Rik	Gm898|Lbh2	RIKEN cDNA A230065H16 gene	protein-coding
common_peak2-29116-35-25-0.730930540321412-1.34810744351377	chr5	123394823	123395738	+	0	NA	intron (NM_001003953, intron 8 of 22)	(CAGG)n|Simple_repeat|Simple_repeat	43262	NM_001005866	30841	Mm.86406	NM_013910	ENSMUSG00000029475	Kdm2b	Cxxc2|E430001G17|Fbl10|Fbxl10|Jhdm1b|PCCX2|mKIAA3014	lysine (K)-specific demethylase 2B	protein-coding
unique_peak1-4000-10-4-1.03448725012141-1.5150158574804	chr2	35508641	35509288	+	0	NA	intron (NM_001290641, intron 2 of 15)	intron (NM_001290641, intron 2 of 15)	31463	NM_001114124	69601	Mm.29629	NM_001001602	ENSMUSG00000026883	Dab2ip	2310011D08Rik|AI480459|Aip1|mKIAA1743	disabled 2 interacting protein	protein-coding
unique_peak2-33063-7-11--0.785871670422967-1.21681515183528	chr10	77206781	77207401	+	0	NA	intron (NM_001287074, intron 1 of 11)	intron (NM_001287074, intron 1 of 11)	17860	NM_001205033	100502953	Mm.486157	NM_001205033	ENSMUSG00000096421	Gm10100	ENSMUSG00000061452	predicted gene 10100	protein-coding
common_peak2-32077-53-86--0.301970483432799-0.612703452660502	chr9	95954245	95955572	+	0	NA	Intergenic	Intergenic	-64940	NM_177352	235533	Mm.213651	NM_177352	ENSMUSG00000041440	Gk5	AV095337|C330018K18Rik|G630067D24Rik	glycerol kinase 5 (putative)	protein-coding
unique_peak1-5176-13-6-0.971117108580164-1.01572999746118	chr5	30239961	30240638	+	0	NA	intron (NR_105781, intron 1 of 2)	L1Md_F|LINE|L1	-99402	NM_031168	16193	Mm.1019	NM_031168	ENSMUSG00000025746	Il6	Il-6	interleukin 6	protein-coding
common_peak1-14133-30-21-0.710243790854576-1.16836819221353	chr2	131160205	131160935	+	0	NA	intron (NM_178607, intron 1 of 5)	B1_Mur4|SINE|Alu	18058	NM_178607	51902	Mm.477523	NM_178607	ENSMUSG00000048911	Rnf24	2810473M14Rik|4930505A13Rik|AI317164|C86507|D2Ertd504e	ring finger protein 24	protein-coding
unique_peak2-37530-2-7--1.91745425626332-1.45399745587252	chr5	24577072	24577423	+	0	NA	intron (NM_145401, intron 1 of 15)	intron (NM_145401, intron 1 of 15)	29213	NM_145401	108099	Mm.33649	NM_145401	ENSMUSG00000028944	Prkag2	2410051C13Rik|AAKG|AAKG2|AI854673|H91620p|WPWS	protein kinase, AMP-activated, gamma 2 non-catalytic subunit	protein-coding
common_peak2-27305-26-52--0.800021362404737-1.59856525524509	chr3	63561871	63563229	+	0	NA	intron (NM_001177733, intron 5 of 23)	HAL1|LINE|L1	92363	NM_001177733	269437	Mm.316391	NM_183191	ENSMUSG00000036834	Plch1	BC042549|PLCeta1|Plcl3	phospholipase C, eta 1	protein-coding
unique_peak2-35353-4-5--0.608423014574403-0.909929411522249	chr17	25861720	25861980	+	0	NA	intron (NM_145409, intron 7 of 21)	B1_Mm|SINE|Alu	2510	NM_145409	214901	Mm.102540	NM_145409	ENSMUSG00000019214	Chtf18	6030457M03Rik|CTF18|Chl12	CTF18, chromosome transmission fidelity factor 18	protein-coding
common_peak1-16313-55-75--0.0433076422908831-0.302487370638123	chr5	115010994	115012210	+	0	NA	Intergenic	Intergenic	-6658	NM_001004180	433940	Mm.194212	NM_001004180	ENSMUSG00000041930	Fam222a	-	family with sequence similarity 222, member A	protein-coding
common_peak1-9180-10-12--0.344024373132323-0.340565874754526	chr11	78411721	78412227	+	0	NA	intron (NM_008702, intron 3 of 10)	B3|SINE|B2	-47737	NM_133706	69071	Mm.29431	NM_133706	ENSMUSG00000037278	Tmem97	1810014L12Rik|AI115531|AL022956|D11Bhm182e	transmembrane protein 97	protein-coding
common_peak2-26331-12-25--1.05166373305345-1.1381569562463	chr2	34772111	34772802	+	0	NA	Intergenic	ORR1A4-int|LTR|MaLR	-2960	NM_028716	74016	Mm.65691	NM_028716	ENSMUSG00000026873	Phf19	3110009G19Rik|3321402G02Rik	PHD finger protein 19	protein-coding
unique_peak1-2666-12-0-3.64877598508764-4.21441993929574	chr16	55533095	55533664	+	0	NA	Intergenic	Intergenic	-250029	NM_178720	239852	Mm.245045	NM_178720	ENSMUSG00000064310	Zpld1	9430016A21Rik	zona pellucida like domain containing 1	protein-coding
common_peak1-11018-11-9-0.186765489364251-0.344532117358383	chr15	38454114	38454688	+	0	NA	Intergenic	Intergenic	-5380	NM_018745	54375	Mm.250214	NM_018745	ENSMUSG00000037458	Azin1	1700085L02Rik|AI414949|Oazi|Oazin	antizyme inhibitor 1	protein-coding
unique_peak2-36683-3-8--1.58390809140159-1.39487600375387	chr3	32406583	32407027	+	0	NA	Intergenic	Intergenic	-2667	NM_001161818	67778	Mm.285620	NM_144519		Zfp639	6230400O18Rik|ANC-2H01|ZASC1|Znf639	zinc finger protein 639	protein-coding
common_peak1-18797-18-17-0.142994149786039-0.353907621462753	chr9	50134593	50135531	+	0	NA	Intergenic	ID_B1|SINE|B4	-167568	NM_029639	76509	Mm.29959	NM_029639	ENSMUSG00000032068	Plet1	0610037B23Rik|1600029D21Rik|AA407923|AU043048	placenta expressed transcript 1	protein-coding
unique_peak1-63-8-2-1.42025991722641-1.65811743852845	chr1	36129636	36130150	+	0	NA	intron (NM_015818, intron 1 of 1)	intron (NM_015818, intron 1 of 1)	4648	NM_015818	50785	Mm.213566	NM_015818	ENSMUSG00000045216	Hs6st1	6Ost1	heparan sulfate 6-O-sulfotransferase 1	protein-coding
common_peak1-11805-30-22-0.64611345343486-1.04213512323541	chr16	58512901	58514388	+	0	NA	intron (NM_018784, intron 1 of 10)	intron (NM_018784, intron 1 of 10)	9781	NM_018784	54613	Mm.212742	NM_018784	ENSMUSG00000022747	St3gal6	1700023B24Rik|AI930218|AW552396|Siat10|St3galVI	ST3 beta-galactoside alpha-2,3-sialyltransferase 6	protein-coding
common_peak1-17782-25-29--0.0450406902634128-0.301029995663982	chr7	98116656	98117599	+	0	NA	Intergenic	L2c|LINE|L2	-122169	NM_011807	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
unique_peak2-32595-1-5--2.2120195109379-1.32905871926422	chr1	90923267	90923591	+	0	NA	Intergenic	RLTR15|LTR|ERVK	10741	NR_040471	73475	Mm.491040	NR_040471		1700067G17Rik	-	RIKEN cDNA 1700067G17 gene	ncRNA
common_peak1-11635-10-8-0.186490343566457-1.078512453669	chr16	21256798	21257346	+	0	NA	promoter-TSS (NR_106145)	promoter-TSS (NR_106145)	-933	NR_106145	102465781		NR_106145	miRBase:MI0025025	Mir7680	mmu-mir-7680	microRNA mir-7680	ncRNA
unique_peak2-34847-5-13--1.51173525806346-1.78669045979184	chr15	76198208	76198694	+	0	NA	promoter-TSS (NM_021555)	promoter-TSS (NM_021555)	-877	NM_021555	59053	Mm.133202	NM_021555	ENSMUSG00000022554	Hgh1	Brp16|D15Ertd741e|Fam203a	HGH1 homolog	protein-coding
common_peak1-9534-29-25-0.411850362474019-0.664636481544818	chr11	116076793	116077981	+	0	NA	promoter-TSS (NR_004853)	promoter-TSS (NR_004853)	71	NR_004853	69681	Mm.33677	NR_004853	ENSMUSG00000092300	Cdk3-ps	2310050O10Rik|Cdk3	cyclin-dependent kinase 3, pseudogene	pseudo
common_peak2-28723-26-31--0.0721009078415378-0.304589945962371	chr5	36075425	36076321	+	0	NA	Intergenic	Intergenic	-3948	NM_194344	231147	Mm.290429	NM_194344	ENSMUSG00000036553	Sh3tc1	4631428G15|BC024909	SH3 domain and tetratricopeptide repeats 1	protein-coding
common_peak1-8599-9-9--0.132314688483142-1.03275496310833	chr10	111543422	111544042	+	0	NA	intron (NM_026223, intron 4 of 5)	URR1A|DNA|MER1_type	23322	NM_026223	67537	Mm.292351	NM_026223	ENSMUSG00000020214	Glipr1l2	4921508O11Rik	GLI pathogenesis-related 1 like 2	protein-coding
unique_peak2-34462-10-20--1.03590207776999-1.03889213727317	chr14	30715852	30716750	+	0	NA	Intergenic	Intergenic	-65265	NM_019979	80795	Mm.104491	NM_019979	ENSMUSG00000042682	Selk	1110001C03Rik|AA673253|HSPC030|Hsp30	selenoprotein K	protein-coding
common_peak1-8679-49-55-0.19892890096758-0.448977331118768	chr11	5520596	5521815	+	0	NA	intron (NM_023816, intron 15 of 26)	intron (NM_023816, intron 15 of 26)	51518	NM_023816	76389	Mm.67300	NM_023816	ENSMUSG00000020481	Ankrd36	1700008J08Rik|1700012M14Rik|Ankrd48	ankyrin repeat domain 36	protein-coding
common_peak1-18283-14-13-0.0918612383000403-0.332077462497413	chr8	41133438	41134118	+	0	NA	Intergenic	Intergenic	238529	NM_030610	80857	Mm.425526	NM_030610	ENSMUSG00000031603	Fgf20	-	fibroblast growth factor 20	protein-coding
common_peak1-8653-50-113--0.791949697685789-3.01247053350547	chr10	127380276	127381534	+	0	NA	Intergenic	ID_B1|SINE|B4	45314	NM_027301	70061	Mm.158320	NM_027301	ENSMUSG00000040127	Sdr9c7	1810054F20Rik|Rdh20|Rdhs|SDR-O|Sdro	4short chain dehydrogenase/reductase family 9C, member 7	protein-coding
common_peak1-15997-11-31--1.49130641574839-2.45535166244229	chr5	33378548	33379079	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	17348	NM_011738	22629	Mm.332314	NM_011738	ENSMUSG00000018965	Ywhah	-	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide	protein-coding
unique_peak1-6441-11-2-1.92373108353046-2.32232533660526	chr7	99019099	99019614	+	0	NA	intron (NM_011807, intron 4 of 22)	intron (NM_011807, intron 4 of 22)	-191548	NM_001243046	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
common_peak2-24538-9-8-0.0196884049619079-1.03275496310833	chr17	27562408	27562829	+	0	NA	TTS (NM_001291045)	TTS (NM_001291045)	67576	NR_106077	102466228		NR_106077		Mir7218	mmu-mir-7218	microRNA mir-7218	ncRNA
unique_peak1-6146-22-10-1.18785248645011-1.74319850844462	chr6	135315722	135316564	+	0	NA	intron (NM_001288628, intron 1 of 5)	B1_Mur1|SINE|Alu	-1368	NM_001288627	13730	Mm.182785	NM_010128	ENSMUSG00000030208	Emp1	I-8-09|TMP	epithelial membrane protein 1	protein-coding
unique_peak1-3662-18-1-3.31291915122835-4.8766546284749	chr19	40256159	40256941	+	0	NA	intron (NM_145499, intron 2 of 8)	Lx9|LINE|L1	5226	NM_145499	226105	Mm.29119	NM_145499	ENSMUSG00000060613	Cyp2c70	-	cytochrome P450, family 2, subfamily c, polypeptide 70	protein-coding
unique_peak1-3973-12-2-2.06381348436648-2.79529063155376	chr2	32501472	32502131	+	0	NA	promoter-TSS (NM_001146348)	promoter-TSS (NM_001146348)	-314	NM_007932	13805	Mm.225297	NM_007932	ENSMUSG00000026814	Eng	AI528660|AI662476|CD105|Endo|S-endoglin	endoglin	protein-coding
common_peak1-11539-50-64-0.018572503450498-0.307711712824847	chr16	4789787	4790883	+	0	NA	promoter-TSS (NM_025670)	promoter-TSS (NM_025670)	-400	NM_025670	66626	Mm.157648	NM_025670	ENSMUSG00000004071	Cdip1	2700048O17Rik|5730403B10Rik|AU018521|AW742692|CDIP	cell death inducing Trp53 target 1	protein-coding
unique_peak2-37861-1-9--2.94898510510411-2.31132995230379	chr5	136556489	136556839	+	0	NA	Intergenic	Intergenic	-3122	NM_133914	54153	Mm.290655	NM_133914	ENSMUSG00000004952	Rasa4	AA793972|AW112107|BB079060|CAPRI|GAPL	RAS p21 protein activator 4	protein-coding
common_peak1-11932-17-22--0.305265617851975-0.348739088570342	chr17	78200198	78200844	+	0	NA	Intergenic	Intergenic	-399067	NM_015800	50766	Mm.311912	NM_015800	ENSMUSG00000024074	Crim1	AU015004	cysteine rich transmembrane BMP regulator 1 (chordin like)	protein-coding
common_peak2-26859-65-81-0.134613934859043-0.403936755856314	chr2	155381481	155382362	+	0	NA	intron (NM_019811, intron 8 of 17)	intron (NM_019811, intron 8 of 17)	745	NR_040613	74945	Mm.401956	NR_040613	ENSMUSG00000086529	Acss2os	4930471I20Rik	acyl-CoA synthetase short-chain family member 2, opposite strand	ncRNA
unique_peak1-3481-17-5-1.63333383748388-2.19184853030482	chr19	10381305	10382086	+	0	NA	Intergenic	B4A|SINE|B4	-2328	NM_198114	269060	Mm.329718	NM_198114	ENSMUSG00000035735	Dagla	Nsddr	diacylglycerol lipase, alpha	protein-coding
common_peak2-27851-20-22--0.03548717146582-0.301029995663994	chr3	152477762	152478688	+	0	NA	Intergenic	Intergenic	101161	NM_025662	329777	Mm.331447	NM_025662	ENSMUSG00000039047	Pigk	3000001O05Rik	phosphatidylinositol glycan anchor biosynthesis, class K	protein-coding
common_peak2-31937-85-117-0.0727601987628095-0.345186474558245	chr9	63927114	63928839	+	0	NA	promoter-TSS (NR_040743)	promoter-TSS (NR_040743)	-592	NR_040743	76814	Mm.243771	NR_040743		Scarletltr	2600006L11Rik	Scarletltr, erythroid developmental long intergenic non-protein coding transcript	ncRNA
common_peak1-12621-32-76--0.987694521475241-2.93258054373007	chr18	32163081	32163813	+	0	NA	intron (NM_032394, intron 8 of 46)	intron (NM_032394, intron 8 of 46)	33138	NM_032394	17922	Mm.440013	NM_032394	ENSMUSG00000024388	Myo7b	-	myosin VIIB	protein-coding
common_peak1-13197-204-258-0.458837811685509-3.71215086952834	chr19	21271130	21273666	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	-74370	NM_009551	22682	Mm.292405	NM_009551		Zfand5	2310057A04Rik|5830475F03Rik|AA415485|Za20d2|Zfp216	zinc finger, AN1-type domain 5	protein-coding
common_peak2-23528-25-40--0.495702099272978-0.683454027796267	chr15	77819607	77820806	+	0	NA	Intergenic	Intergenic	-18952	NM_018749	55944	Mm.3955	NM_018749	ENSMUSG00000016554	Eif3d	66/67kDa|AA407891|Eif3s7|eIF3p66	eukaryotic translation initiation factor 3, subunit D	protein-coding
common_peak1-14365-85-108-0.187218923347725-0.540831047726678	chr2	167420939	167422533	+	0	NA	Intergenic	Intergenic	35769	NM_023230	66589	Mm.278783	NM_023230	ENSMUSG00000078923	Ube2v1	0610011J09Rik|AI256840|CROC-1|CROC1|D7Bwg1382e|UEV-1	ubiquitin-conjugating enzyme E2 variant 1	protein-coding
unique_peak1-949-9-3-1.18961340640422-1.57096726280955	chr11	57706809	57707332	+	0	NA	Intergenic	MIRc|SINE|MIR	-61421	NM_008213	15110	Mm.4746	NM_008213	ENSMUSG00000037335	Hand1	Ehand1|Hxt|Th1|Thing1|bHLHa27|eHAND	heart and neural crest derivatives expressed transcript 1	protein-coding
common_peak1-13736-69-53-0.840254945095264-3.14531979957659	chr2	32436211	32438672	+	0	NA	intron (NM_198191, intron 9 of 9)	intron (NM_198191, intron 9 of 9)	-5157	NM_001276425	20448	Mm.27446	NM_011373	ENSMUSG00000079442	St6galnac4	SIAT7-D|ST6GalNAcIV|Siat7d	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4	protein-coding
common_peak1-16641-11-8-0.338768582809301-1.14218153353838	chr6	72548263	72548758	+	0	NA	promoter-TSS (NM_144917)	promoter-TSS (NM_144917)	-103	NM_001253692	232089	Mm.167232	NM_144917	ENSMUSG00000056698	Elmod3	AI844780|C330008I15Rik|RBM29|Rbed1	ELMO/CED-12 domain containing 3	protein-coding
unique_peak2-38403-6-15--1.4346018896197-1.16633110333236	chr7	19748866	19749439	+	0	NA	intron (NM_001080815, intron 4 of 13)	RSINE1|SINE|B4	2324	NM_001080815	381853	Mm.333633	NM_001080815	ENSMUSG00000030406	Gipr	GIP-R|Gm1081|Gm160	gastric inhibitory polypeptide receptor	protein-coding
unique_peak2-33987-4-5--0.608423014574403-0.909929411522249	chr12	85963102	85963404	+	0	NA	Intergenic	Intergenic	-4837	NM_008992	19300	Mm.229109	NM_008992	ENSMUSG00000021240	Abcd4	P69r|P70R|Pxmp1l	ATP-binding cassette, sub-family D (ALD), member 4	protein-coding
common_peak1-14038-31-29-0.318348075204605-0.512115693271959	chr2	118388511	118389516	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-13599	NM_138313	171543	Mm.210125	NM_138313	ENSMUSG00000040093	Bmf	AW260063|AW411872	BCL2 modifying factor	protein-coding
unique_peak2-38513-4-12--1.72390023199434-1.85743853830261	chr7	44986744	44987402	+	0	NA	Intergenic	Intergenic	1532831	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak2-34802-2-5--1.50241675698448-1.08602067057793	chr15	72947936	72948196	+	0	NA	intron (NM_153178, intron 13 of 18)	(TG)n|Simple_repeat|Simple_repeat	27224	NM_053068	93696	Mm.23095	NM_053068	ENSMUSG00000068391	Chrac1	2410152E03Rik|2810406L04Rik|YCL1	chromatin accessibility complex 1	protein-coding
common_peak1-10024-17-49--1.42555985156969-3.27638997629153	chr13	9276693	9277239	+	0	NA	intron (NM_001081426, intron 1 of 36)	intron (NM_001081426, intron 1 of 36)	1195	NM_001081426	208440	Mm.217326	NM_172459	ENSMUSG00000048264	Dip2c	2900024P20Rik|9630044M06|mKIAA0934	DIP2 disco-interacting protein 2 homolog C (Drosophila)	protein-coding
unique_peak1-3980-13-2-2.19350952991661-3.03832868024006	chr2	32887720	32888384	+	0	NA	intron (NM_178888, intron 10 of 28)	intron (NM_178888, intron 10 of 28)	-50476	NM_019488	56017	Mm.305754	NM_019488	ENSMUSG00000026791	Slc2a8	D2Ertd44e|GLUT8|GlutX1	solute carrier family 2, (facilitated glucose transporter), member 8	protein-coding
common_peak2-24001-20-22--0.03548717146582-0.301029995663994	chr16	20516974	20517803	+	0	NA	exon (NM_007889, exon 1 of 15)	exon (NM_007889, exon 1 of 15)	251	NM_007889	13544	Mm.247259	NM_007889	ENSMUSG00000003233	Dvl3	-	dishevelled 3, dsh homolog (Drosophila)	protein-coding
common_peak1-8485-12-13--0.158578936969966-0.301029995663979	chr10	80678282	80678933	+	0	NA	intron (NM_178662, intron 3 of 12)	intron (NM_178662, intron 3 of 12)	-13825	NM_027120	69564	Mm.437211	NM_027120	ENSMUSG00000004939	Nmrk2	2310015C21Rik|Itgb1bp3|Mibp	nicotinamide riboside kinase 2	protein-coding
unique_peak2-39821-6-9--0.75652998450706-1.11707584880836	chrX	37245960	37246606	+	0	NA	Intergenic	L1Md_F3|LINE|L1	-29502	NM_001191032	100504400	Mm.373409	NM_001191032	ENSMUSG00000095240	Cypt14	-	cysteine-rich perinuclear theca 14	protein-coding
common_peak1-7782-26-20-0.535581669379702-0.738267116931592	chr1	93824462	93825323	+	0	NA	Intergenic	Intergenic	126838	NM_007855	13345	Mm.9474	NM_007855	ENSMUSG00000007805	Twist2	Dermo1|bHLHa39	twist basic helix-loop-helix transcription factor 2	protein-coding
unique_peak2-35914-11-19--0.813234510635749-0.769930178837768	chr19	5687967	5688738	+	0	NA	promoter-TSS (NM_022012)	promoter-TSS (NM_022012)	556	NM_144868	104401	Mm.329650	NM_144868	ENSMUSG00000054874	Pcnxl3	mKIAA4073	pecanex-like 3 (Drosophila)	protein-coding
common_peak1-15247-14-20--0.493101262421116-0.456667090758524	chr4	11322291	11322833	+	0	NA	Intergenic	Intergenic	-8632	NM_194055	207920	Mm.387719	NM_194055	ENSMUSG00000040728	Esrp1	2210008M09Rik|A630065D16|BC031468|Rbm35a	epithelial splicing regulatory protein 1	protein-coding
unique_peak2-36411-3-9--1.73591118484664-1.57096726280955	chr2	127208436	127208868	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	19630	NM_009633	11552	Mm.347390	NM_009633	ENSMUSG00000058620	Adra2b	Adra-2b|[a]2B|alpha2-C2|alpha2B	adrenergic receptor, alpha 2b	protein-coding
unique_peak1-1847-7-1-1.79909083029819-1.80617997398389	chr14	47541425	47541928	+	0	NA	intron (NM_028966, intron 2 of 11)	MIRc|SINE|MIR	39036	NM_001037221	74480	Mm.214454	NM_028966	ENSMUSG00000021838	Samd4	1700024G08Rik|1700111L17Rik|4933436G17Rik|Samd4a|Smaug|Smaug1	sterile alpha motif domain containing 4	protein-coding
unique_peak1-1699-6-0-2.5653981103803-2.10720996964787	chr13	90145118	90145553	+	0	NA	intron (NM_028012, intron 3 of 7)	RMER1B|Other|Other	83878	NM_028012	108138	Mm.37531	NM_028012	ENSMUSG00000021615	Xrcc4	2310057B22Rik|AW413319|AW545101	X-ray repair complementing defective repair in Chinese hamster cells 4	protein-coding
common_peak1-14360-37-36-0.316539705856869-0.566504029620424	chr2	167062200	167063528	+	0	NA	intron (NM_008968, intron 1 of 9)	intron (NM_008968, intron 1 of 9)	3173	NM_008968	19223	Mm.2339	NM_008968	ENSMUSG00000017969	Ptgis	Cyp8|Cyp8a1|Pgis	prostaglandin I2 (prostacyclin) synthase	protein-coding
common_peak1-16089-29-25-0.411850362474019-0.664636481544818	chr5	64610725	64611771	+	0	NA	intron (NM_019636, intron 2 of 19)	intron (NM_019636, intron 2 of 19)	-10348	NM_001289514	57915	Mm.286353	NM_019636	ENSMUSG00000029174	Tbc1d1	1110062G02Rik|AI385682|AW555803|Tbc1|mKIAA1108	TBC1 domain family, member 1	protein-coding
common_peak2-28457-24-50--0.879215439203779-1.66691574198013	chr4	151057476	151058012	+	0	NA	intron (NM_001081557, intron 3 of 23)	MTE2a|LTR|MaLR	178133	NM_001081557	100072	Mm.318846	NM_001081557	ENSMUSG00000014592	Camta1	1810059M14Rik|2310058O09Rik|AI316882|AW987475|mKIAA0833	calmodulin binding transcription activator 1	protein-coding
unique_peak1-4907-10-2-1.77145284428761-2.09384600808989	chr4	46485773	46486256	+	0	NA	TTS (NM_130889)	TTS (NM_130889)	-16187	NM_053179	94181	Mm.249349	NM_053179	ENSMUSG00000028334	Nans	4632418E04Rik|BB056474|Sas	N-acetylneuraminic acid synthase (sialic acid synthase)	protein-coding
unique_peak2-36151-4-12--1.72390023199434-1.85743853830261	chr2	24975266	24975812	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-24814	NM_172204	241275	Mm.218774	NM_172204	ENSMUSG00000036805	Noxa1	NY-CO-31|SDCCAG31	NADPH oxidase activator 1	protein-coding
unique_peak1-4284-9-3-1.18961340640422-1.57096726280955	chr2	142837967	142838495	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-50574	NM_021335	20639	Mm.1323	NM_021335		Snrpb2	2810052G09Rik	U2 small nuclear ribonucleoprotein B	protein-coding
common_peak2-22943-29-54--0.669069632909549-1.18863360106103	chr14	48120579	48121768	+	0	NA	intron (NM_001146085, intron 2 of 3)	MTEb|LTR|MaLR	28937	NM_001146085	78938	Mm.11935	NM_030236	ENSMUSG00000037536	Fbxo34	2900057B08Rik|5830426G16Rik	F-box protein 34	protein-coding
common_peak2-20664-11-29--1.39819701135691-2.12469164491494	chr10	84392148	84393176	+	0	NA	intron (NM_001013441, intron 2 of 8)	intron (NM_001013441, intron 2 of 8)	12304	NM_183172	237422	Mm.18936	NM_183172		Ric8b	BC051080|Ric-8|Ric-8b	resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)	protein-coding
common_peak2-23000-23-17-0.551842503066768-0.713114929964887	chr14	60318011	60318833	+	0	NA	intron (NM_015803, intron 32 of 35)	MLT1A|LTR|MaLR	74304	NM_145463	219134	Mm.275409	NM_145463	ENSMUSG00000044461	Shisa2	9430059P22Rik|MAd2|Tmem46|mShisa|shisa	shisa homolog 2 (Xenopus laevis)	protein-coding
unique_peak1-6984-8-3-1.00522241794757-1.39487600375387	chr8	120317398	120317907	+	0	NA	intron (NM_026758, intron 3 of 4)	MER20|DNA|MER1_type	8177	NM_026758	68533	Mm.181836	NM_026758	ENSMUSG00000031843	Mphosph6	1110001M01Rik|AA536809|C86426	M phase phosphoprotein 6	protein-coding
unique_peak2-35430-5-10--1.16381195464315-1.33892459842472	chr17	34894412	34894958	+	0	NA	Intergenic	MMERGLN-int|LTR|ERV1	-13843	NM_009780	12268	Mm.477109	NM_009780	ENSMUSG00000073418	C4b	C4|Ss	complement component 4B (Chido blood group)	protein-coding
unique_peak2-35284-5-16--1.79184317725619-1.61682445937017	chr17	6316532	6316993	+	0	NA	intron (NM_001166629, intron 1 of 4)	CpG	712	NM_001166629	100310872	Mm.381893	NM_001166629		Dynlt1a	-	dynein light chain Tctex-type 1A	protein-coding
common_peak2-19716-12-19--0.673152109799724-0.546772548767014	chr1	65186602	65187323	+	0	NA	Intergenic	Intergenic	-17174	NM_001285882	98303	Mm.348057	NM_175293	ENSMUSG00000044816	D630023F18Rik	AI314969	RIKEN cDNA D630023F18 gene	protein-coding
unique_peak1-3547-22-10-1.18785248645011-1.74319850844462	chr19	24030452	24031620	+	0	NA	Intergenic	Intergenic	74473	NM_001114174	381217	Mm.426078	NM_001114174	ENSMUSG00000071604	Fam189a2	AI414343|AI666772|Gm967	family with sequence similarity 189, member A2	protein-coding
common_peak1-15600-13-11-0.193509529916613-0.379391706698377	chr4	130573426	130574158	+	0	NA	Intergenic	Intergenic	73492	NM_010769	17180	Mm.271796	NM_010769	ENSMUSG00000040533	Matn1	CMP|Crtm|Mat1|matrilin-1	matrilin 1, cartilage matrix protein	protein-coding
unique_peak2-32597-6-5--0.0195643903408542-0.947717972411649	chr1	91025835	91026298	+	0	NA	intron (NM_133816, intron 2 of 5)	intron (NM_133816, intron 2 of 5)	59029	NM_133816	98402	Mm.170983	NM_133816		Sh3bp4	AI594717|AW227605|BOG25	SH3-domain binding protein 4	protein-coding
common_peak1-11469-213-265-0.495558339761997-4.42692586207277	chr15	101974334	101978938	+	0	NA	intron (NM_008344, intron 1 of 3)	intron (NM_008344, intron 1 of 3)	2019	NM_008344	16012	Mm.358609	NM_008344	ENSMUSG00000023046	Igfbp6	IGFBP-6	insulin-like growth factor binding protein 6	protein-coding
unique_peak2-35986-6-7--0.434601889619698-0.97990265578305	chr19	27216942	27217373	+	0	NA	Intergenic	ORR1A2|LTR|MaLR	-74353	NM_013703	22359	Mm.4141	NM_013703	ENSMUSG00000024924	Vldlr	AA408956|AI451093|AW047288	very low density lipoprotein receptor	protein-coding
common_peak1-9764-8-7-0.00522241794757061-1.00793137938329	chr12	54999494	54999961	+	0	NA	intron (NM_013780, intron 5 of 11)	L1Md_T|LINE|L1	305134	NM_028133	112407	Mm.133037	NM_028133	ENSMUSG00000035105	Egln3	2610021G09Rik|AI505553|AI648162|Hif-p4h-3|Phd3|SM-20	egl-9 family hypoxia-inducible factor 3	protein-coding
unique_peak2-32699-12-13--0.158578936969966-0.301029995663979	chr1	151617599	151618319	+	0	NA	Intergenic	B3|SINE|B2	190455	NM_008869	18783	Mm.4186	NM_008869	ENSMUSG00000056220	Pla2g4a	Pla2g4|cPLA2|cPLA2alpha	phospholipase A2, group IVA (cytosolic, calcium-dependent)	protein-coding
common_peak2-21013-24-39--0.528718192119646-0.694972475810969	chr11	29525787	29526670	+	0	NA	Intergenic	MLT2B2|LTR|ERVL	-66670	NM_194053	68585	Mm.192580	NM_024226	ENSMUSG00000020458	Rtn4	1110020G17Rik|AA407876|AA409940|AA960376|ASY|C130026I10Rik|NOGO|NSP-CL|NgA|Nogo-A|Nogo-B|Nogo-C|mKIAA0886|mKIAA4153	reticulon 4	protein-coding
common_peak1-12212-49-57-0.148302827897612-0.389014771016012	chr17	34024175	34025355	+	0	NA	intron (NM_001195298, intron 1 of 10)	intron (NM_001195298, intron 1 of 10)	2813	NM_001195298	100502766	Mm.335713	NM_001195298	ENSMUSG00000079553	Kifc1	100042970|Gm4137|HSET|KNSL2|Kifc5a|Knsl2a|Tctex-7|Tctex-7A|Tctex7|Tctex7a	kinesin family member C1	protein-coding
common_peak2-28304-10-25--1.34402437313232-1.74319850844462	chr4	132883701	132884425	+	0	NA	intron (NM_199306, intron 1 of 15)	B4|SINE|B4	11167	NM_199306	230796	Mm.226576	NM_199306	ENSMUSG00000037622	Wdtc1	Gm695|adipose|adp	WD and tetratricopeptide repeats 1	protein-coding
common_peak2-20133-9-13--0.617741515653384-0.459837087125828	chr1	166040910	166041449	+	0	NA	Intergenic	MTD|LTR|MaLR	-4216	NM_011347	20344	Mm.3337	NM_011347	ENSMUSG00000026580	Selp	CD62P|GMP-140|Grmp|LECAM3|PADGEM	selectin, platelet	protein-coding
common_peak1-9849-9-9--0.132314688483142-1.03275496310833	chr12	79599684	79600235	+	0	NA	intron (NM_145965, intron 8 of 22)	Lx7|LINE|L1	-192563	NM_027597	70897	Mm.56514	NM_027597	ENSMUSG00000056987	Fam71d	4921509E07Rik|4930516C23Rik|GARI-L2	family with sequence similarity 71, member D	protein-coding
common_peak1-11068-9-12--0.510826311736872-0.394412252720706	chr15	58033809	58034320	+	0	NA	intron (NM_026346, intron 4 of 8)	RSINE1|SINE|B4	12383	NM_026346	67731	Mm.25683	NM_026346	ENSMUSG00000022358	Fbxo32	4833442G10Rik|AI430017|ATROGIN1|Gm20361|MAFbx	F-box protein 32	protein-coding
common_peak2-21827-42-26-0.987441825703716-2.47480076710857	chr11	120236626	120237533	+	0	NA	intron (NM_027980, intron 3 of 9)	intron (NM_027980, intron 3 of 9)	2981	NM_027980	71885	Mm.274890	NM_027980	ENSMUSG00000025384	2310003H01Rik	Faap100	RIKEN cDNA 2310003H01 gene	protein-coding
unique_peak2-37229-11-11--0.0762689164695427-0.301029995663976	chr4	88805520	88806045	+	0	NA	intron (NM_024433, intron 4 of 7)	MERVL-int|LTR|ERVL	22508	NM_024433	66902	Mm.28500	NM_024433	ENSMUSG00000062937	Mtap	1300019I21Rik|MSAP	methylthioadenosine phosphorylase	protein-coding
common_peak2-29643-16-13-0.310908720210457-0.417187467413082	chr6	66535430	66535860	+	0	NA	Intergenic	L1Md_F3|LINE|L1	-25943	NM_134170	171188	Mm.222748	NM_134170	ENSMUSG00000062905	Vmn1r32	V1rc15	vomeronasal 1 receptor 32	protein-coding
unique_peak1-5607-13-4-1.45654393575041-2.23384849113406	chr6	97222169	97222868	+	0	NA	Intergenic	Intergenic	-19744	NM_001081157	320502	Mm.68163	NM_001081157	ENSMUSG00000044086	Lmod3	5430424A14Rik	leiomodin 3 (fetal)	protein-coding
unique_peak1-3556-35-15-1.4313702584625-3.36245859328196	chr19	24671097	24672300	+	0	NA	Intergenic	L1_Mur2|LINE|L1	-41381	NM_008846	18719	Mm.217214	NM_008846	ENSMUSG00000024867	Pip5k1b	PI4P5K-I[b]|PIP5K1-beta|PIP5KIbeta|Pipk5b|STM7	phosphatidylinositol-4-phosphate 5-kinase, type 1 beta	protein-coding
unique_peak2-39318-7-14--1.10779976531033-0.817533494790411	chr8	125013020	125013513	+	0	NA	intron (NM_001037298, intron 30 of 50)	intron (NM_001037298, intron 30 of 50)	13223	NM_153775	66965	Mm.482288	NM_153775	ENSMUSG00000049482	Ctu2	2310061F22Rik|C16orf84|Ncs2	cytosolic thiouridylase subunit 2 homolog (S. pombe)	protein-coding
common_peak2-31047-9-6-0.382258484346616-1.11707584880836	chr8	14969879	14970318	+	0	NA	intron (NM_172751, intron 18 of 28)	intron (NM_172751, intron 18 of 28)	-40927	NM_029116	74901	Mm.46675	NM_029116	ENSMUSG00000055675	Kbtbd11	2900016B01Rik|4930465M17Rik|mKIAA0711	kelch repeat and BTB (POZ) domain containing 11	protein-coding
common_peak2-29718-106-107-0.582879352842251-2.76023207685079	chr6	83914299	83915373	+	0	NA	intron (NM_001166371, intron 15 of 25)	Tigger7|DNA|MER2_type	-43756	NM_001077694	26903	Mm.220982	NM_021469	ENSMUSG00000033788	Dysf	2310004N10Rik|AI604795|D6Pas3	dysferlin	protein-coding
common_peak2-26821-17-22--0.305265617851975-0.348739088570342	chr2	152293844	152294322	+	0	NA	Intergenic	B4|SINE|B4	-3727	NM_001037933	629114	Mm.389372	NM_001037933	ENSMUSG00000074681	Defb23	EG629114	defensin beta 23	protein-coding
common_peak1-14820-22-15-0.647284105087405-0.849699271740893	chr3	90583551	90584515	+	0	NA	Intergenic	L1Md_F3|LINE|L1	53205	NM_207263	384997	Mm.316644	NM_207263	ENSMUSG00000042250	Pglyrp4	Gm1478|Gm413	peptidoglycan recognition protein 4	protein-coding
common_peak1-13552-23-15-0.721767504509081-0.949797625454541	chr2	4651342	4652342	+	0	NA	intron (NM_178663, intron 2 of 8)	intron (NM_178663, intron 2 of 8)	12965	NM_178663	209645	Mm.149539	NM_178663	ENSMUSG00000048186	Bend7	1110017O21Rik|E130319B15Rik	BEN domain containing 7	protein-coding
unique_peak2-37848-0-6--3.64748585253182-1.56314192529759	chr5	135632650	135633065	+	0	NA	intron (NM_013763, intron 4 of 6)	B2_Mm2|SINE|B2	7276	NM_013763	27368	Mm.36746	NM_013763		Tbl2	C76179|WS-bTRP	transducin (beta)-like 2	protein-coding
common_peak2-20474-49-94--0.563571785305764-1.54548614511472	chr10	44003309	44004736	+	0	NA	intron (NM_053069, intron 1 of 7)	intron (NM_053069, intron 1 of 7)	15858	NM_053069	11793	Mm.22264	NM_053069	ENSMUSG00000038160	Atg5	2010107M05Rik|3110067M24Rik|AW319544|Apg5l|Atg5l|C88337|Paddy	autophagy related 5	protein-coding
unique_peak1-2137-9-2-1.60465090568306-1.87199725847353	chr15	55692907	55693576	+	0	NA	intron (NM_016667, intron 1 of 6)	MER58B|DNA|MER1_type	45263	NM_016667	20649	Mm.309425	NM_016667	ENSMUSG00000060429	Sntb1	-	syntrophin, basic 1	protein-coding
unique_peak2-37257-0-5--3.42509343119537-1.32905871926422	chr4	106378376	106378791	+	0	NA	intron (NM_001126487, intron 10 of 23)	intron (NM_001126487, intron 10 of 23)	21952	NM_001126487	381538	Mm.318201	NM_001126487	ENSMUSG00000047502	Mroh7	Gm1027|Heatr8	maestro heat-like repeat family member 7	protein-coding
common_peak2-20686-11-10-0.0492619656143161-0.31137425193576	chr10	89533511	89534017	+	0	NA	intron (NM_001128086, intron 5 of 24)	intron (NM_001128086, intron 5 of 24)	197510	NM_001128086	77531	Mm.440605	NM_181398	ENSMUSG00000058589	Anks1b	AIDA-1b|C030032C09Rik|E530015N03Rik|ENSMUSG00000078431|Gm10937|Gm1555	ankyrin repeat and sterile alpha motif domain containing 1B	protein-coding
common_peak1-18154-16-36--1.09118972336089-1.81352036806615	chr8	11635807	11636551	+	0	NA	promoter-TSS (NM_001167967)	promoter-TSS (NM_001167967)	-422	NM_001281974	102334	Mm.12459	NM_133971	ENSMUSG00000031508	Ankrd10	4833425P12Rik|AW549277	ankyrin repeat domain 10	protein-coding
common_peak2-24314-14-11-0.314253659636488-0.435191258261915	chr17	46202765	46203208	+	0	NA	Intergenic	L1M4c|LINE|L1	-33660	NM_001287057	22339	Mm.282184	NM_009505	ENSMUSG00000023951	Vegfa	Vegf|Vpf	vascular endothelial growth factor A	protein-coding
unique_peak2-33991-8-8--0.164702583494742-1.00793137938329	chr12	86836256	86836710	+	0	NA	Intergenic	ORSL|DNA|Tip100	21632	NM_010234	14281	Mm.246513	NM_010234	ENSMUSG00000021250	Fos	D12Rfj1|c-fos|cFos	FBJ osteosarcoma oncogene	protein-coding
common_peak1-13384-35-16-1.34390741721217-3.08659436536937	chr19	46529148	46530357	+	0	NA	intron (NM_001025391, intron 8 of 11)	intron (NM_001025391, intron 8 of 11)	-46386	NM_053100	93679	Mm.392177	NM_053100	ENSMUSG00000025034	Trim8	AA408830|BB006755|GERP|Rnf27	tripartite motif-containing 8	protein-coding
unique_peak2-34369-1-6--2.43441193227435-1.56314192529759	chr13	109401091	109401447	+	0	NA	Intergenic	L1Md_T|LINE|L1	-43102	NM_011056	238871	Mm.434429	NM_011056		Pde4d	9630011N22Rik|Dpde3	phosphodiesterase 4D, cAMP specific	protein-coding
common_peak2-19569-9-8-0.0196884049619079-1.03275496310833	chr1	10286132	10286450	+	0	NA	Intergenic	Lx9|LINE|L1	-63540	NM_001102430	211673	Mm.229141	NM_001102430	ENSMUSG00000067851	Arfgef1	ARFGEP1|BIG1|D130059B05Rik|D730028O18Rik|P200	ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited)	protein-coding
common_peak1-9208-37-52--0.20192738307738-0.380848279231604	chr11	82780817	82782038	+	0	NA	Intergenic	RMER19B|LTR|ERVK	-7244	NR_045932	76392	Mm.295205	NR_045932	ENSMUSG00000086327	Slfn5os	1700003F17Rik	schlafen 5, opposite strand	ncRNA
common_peak1-15864-36-66--0.586768104290018-1.1689717347007	chr5	4496056	4497047	+	0	NA	Intergenic	Intergenic	261665	NM_021457	14362	Mm.246003	NM_021457	ENSMUSG00000044674	Fzd1	AW227548|FZ-1|Fz1	frizzled homolog 1 (Drosophila)	protein-coding
common_peak1-12298-29-35--0.0576349208272013-0.301029995663967	chr17	46383461	46384633	+	0	NA	promoter-TSS (NM_145353)	promoter-TSS (NM_145353)	947	NM_009085	20016	Mm.3458	NM_009085	ENSMUSG00000067148	Polr1c	40kDa|AA409007|AA959927|AL024089|Polr1e|RPA40|Rpo1-1	polymerase (RNA) I polypeptide C	protein-coding
unique_peak1-6324-9-4-0.867685311516858-1.36011389749466	chr7	45728081	45728611	+	0	NA	Intergenic	Intergenic	791558	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak2-34331-1-6--2.43441193227435-1.56314192529759	chr13	98192855	98193210	+	0	NA	Intergenic	L1MC|LINE|L1	-11893	NR_110432	100039691	Mm.219358	NR_110430		Lincenc1	ENSMUSG00000078952|Gm11019|Gm2373|linc-Enc1	long intergenic non-coding RNA, embryonic stem cells expressed 1	ncRNA
common_peak1-9897-17-10-0.75886471956774-0.917676348953458	chr12	86000696	86001392	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	17198	NM_001033776	432677	Mm.311913	NM_001033776	ENSMUSG00000071235	Vrtn	7420416P09Rik	vertebrae development associated	protein-coding
unique_peak1-4238-8-1-2.00522241794757-2.05605744720049	chr2	125787432	125787924	+	0	NA	intron (NM_001291002, intron 8 of 9)	L1MD|LINE|L1	-72716	NM_008008	14178	Mm.330557	NM_008008	ENSMUSG00000027208	Fgf7	Kgf	fibroblast growth factor 7	protein-coding
common_peak2-25956-5-10--1.16381195464315-1.33892459842472	chr19	47731693	47732058	+	0	NA	intron (NM_001290825, intron 34 of 53)	intron (NM_001290825, intron 34 of 53)	34657	NM_007732	12821	Mm.1225	NM_007732	ENSMUSG00000025064	Col17a1	BP180|Bpag|Bpag2	collagen, type XVII, alpha 1	protein-coding
unique_peak1-6697-9-1-2.18961340640422-2.31132995230379	chr8	33887790	33888266	+	0	NA	Intergenic	Intergenic	172470	NM_001177589	100042715	Mm.291093	NM_001177589		Gm3985	-	predicted gene 3985	protein-coding
unique_peak2-38982-9-13--0.617741515653384-0.459837087125828	chr8	40962888	40963538	+	0	NA	Intergenic	Intergenic	-235181	NM_001113326	20288	Mm.239291	NM_031195	ENSMUSG00000025044	Msr1	MRS-A|MSR|MSR-A|SR-AI|SR-AII|Scara1|Scvr	macrophage scavenger receptor 1	protein-coding
common_peak1-19388-17-12-0.517856620063946-0.647240723060192	chrX	42148331	42148971	+	0	NA	Intergenic	L1MC|LINE|L1	-5277	NM_178739	245404	Mm.55685	NM_178739	ENSMUSG00000045284	Dcaf12l1	9330180J20|A230038L21Rik|Decaf12l1|Wdr40b	DDB1 and CUL4 associated factor 12-like 1	protein-coding
common_peak1-19343-11-12--0.191746133889479-0.310474156842889	chrX	7762551	7763242	+	0	NA	exon (NM_007898, exon 5 of 5)	exon (NM_007898, exon 5 of 5)	7742	NM_007898	13595	Mm.27183	NM_007898	ENSMUSG00000031168	Ebp	AI255399|Pabp|Td|mSI	phenylalkylamine Ca2+ antagonist (emopamil) binding protein	protein-coding
common_peak2-31428-54-104--0.541159756036389-1.57148672735882	chr8	94837691	94838909	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	41719	NR_110452	71296	Mm.86664	NR_033641	ENSMUSG00000031736	Crnde	4933436C20Rik	colorectal neoplasia differentially expressed (non-protein coding)	ncRNA
unique_peak2-39935-4-15--2.02346051385325-2.4322161449009	chrX	109095493	109096078	+	0	NA	Intergenic	L1_Mus2|LINE|L1	-111344	NM_031382	83556	Mm.190608	NM_031382	ENSMUSG00000034555	Tex16	OTTMUSG00000018437	testis expressed gene 16	protein-coding
common_peak2-24917-36-81--0.878230918450329-2.56597041357378	chr17	87106641	87108390	+	0	NA	Intergenic	Intergenic	-45689	NM_010137	13819	Mm.1415	NM_010137	ENSMUSG00000024140	Epas1	HIF-2alpha|HIF2A|HLF|HRF|MOP2|bHLHe73	endothelial PAS domain protein 1	protein-coding
common_peak1-8617-32-24-0.635235829444936-1.08405458203115	chr10	116995343	116996594	+	0	NA	Intergenic	MT2B|LTR|ERVL	-70588	NM_027468	70574	Mm.339332	NM_027468	ENSMUSG00000020183	Cpm	1110060I01Rik|5730456K23Rik|AA589379|E030045M14Rik	carboxypeptidase M	protein-coding
common_peak2-23349-10-8-0.186490343566457-1.078512453669	chr15	41286754	41287211	+	0	NA	intron (NM_001130166, intron 1 of 16)	ID4_|SINE|ID	7954	NM_001130166	170719	Mm.254267	NM_130885	ENSMUSG00000022307	Oxr1	2210416C20Rik|C7|C7B	oxidation resistance 1	protein-coding
unique_peak1-4744-19-11-0.81772482594053-0.991115276827166	chr3	108532703	108533753	+	0	NA	Intergenic	Intergenic	-8011	NM_029522	76123	Mm.226941	NM_029522	ENSMUSG00000027883	Gpsm2	6230410J09Rik|LGN|Pins	G-protein signalling modulator 2 (AGS3-like, C. elegans)	protein-coding
common_peak1-10154-43-38-0.497160966661454-0.979629970520458	chr13	36726351	36727951	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	99195	NM_153529	68404	Mm.232930	NM_153529	ENSMUSG00000039114	Nrn1	0710008J23Rik|Cpg15|Nrn	neuritin 1	protein-coding
common_peak2-27354-16-17--0.0516613591742505-0.301029995663984	chr3	79559736	79560574	+	0	NA	Intergenic	(TC)n|Simple_repeat|Simple_repeat	-18439	NM_212452	381489	Mm.331086	NM_212452		Rxfp1	Gm1018|Lgr7	relaxin/insulin-like family peptide receptor 1	protein-coding
common_peak1-10483-12-15--0.351224014912361-0.332077462497413	chr13	115089590	115090245	+	0	NA	intron (NM_010887, intron 4 of 4)	intron (NM_010887, intron 4 of 4)	88385	NM_010887	17993	Mm.253142	NM_010887	ENSMUSG00000021764	Ndufs4	6720411N02Rik|C1-18k	NADH dehydrogenase (ubiquinone) Fe-S protein 4	protein-coding
unique_peak1-6388-8-3-1.00522241794757-1.39487600375387	chr7	75796204	75796645	+	0	NA	Intergenic	Intergenic	33082	NR_003648	384639	Mm.261760	NM_001013781	ENSMUSG00000094854	Gm5334	EG384639	tetraspanin 7 pseudogene	pseudo
common_peak1-13978-24-32--0.251184216590737-0.358978896303361	chr2	100685645	100686659	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-778753	NM_009020	19374	Mm.4988	NM_009020	ENSMUSG00000032864	Rag2	Rag-2	recombination activating gene 2	protein-coding
common_peak1-8957-10-12--0.344024373132323-0.340565874754526	chr11	55204179	55204935	+	0	NA	Intergenic	MTC|LTR|MaLR	29025	NM_009242	20692	Mm.291442	NM_009242	ENSMUSG00000018593	Sparc	BM-40|ON	secreted acidic cysteine rich glycoprotein	protein-coding
common_peak1-18075-22-8-1.47735910364509-2.29727994934156	chr8	34635515	34636405	+	0	NA	Intergenic	Intergenic	41177	NR_033589	628431	Mm.376526	NR_033589		Hmgb1-rs17	Hmg1-rs17	high mobility group box 1, related sequence 17	pseudo
common_peak1-14309-10-9-0.0344872501214071-1.05503135781948	chr2	163017265	163017724	+	0	NA	Intergenic	PB1|SINE|Alu	-33696	NM_001098799	269389	Mm.207709	NM_001098799	ENSMUSG00000074607	Tox2	AI851523|AV026525|BI987407|Gcx1|RxHMG1	TOX high mobility group box family member 2	protein-coding
unique_peak2-33635-16-13-0.310908720210457-0.417187467413082	chr11	98394709	98395519	+	0	NA	intron (NM_011771, intron 1 of 7)	B3|SINE|B2	12231	NM_011771	22780	Mm.133367	NM_011771	ENSMUSG00000018168	Ikzf3	5830411O07Rik|Aiolos|Zfpn1a3|Znfn1a3	IKAROS family zinc finger 3	protein-coding
common_peak2-26663-7-13--1.00826409175941-0.697979855752659	chr2	121473429	121473899	+	0	NA	intron (NM_172673, intron 1 of 14)	L1M3e|LINE|L1	141205	NM_001290986	241627	Mm.293284	NM_030234	ENSMUSG00000027242	Wdr76	5830411K18Rik|6030457D09|AA517836	WD repeat domain 76	protein-coding
common_peak1-10657-24-45--0.730352053289296-1.16863888781394	chr14	48120565	48121430	+	0	NA	intron (NM_001146085, intron 2 of 3)	intron (NM_001146085, intron 2 of 3)	28761	NM_001146085	78938	Mm.11935	NM_030236	ENSMUSG00000037536	Fbxo34	2900057B08Rik|5830426G16Rik	F-box protein 34	protein-coding
common_peak2-24835-10-9-0.0344872501214071-1.05503135781948	chr17	72961628	72962025	+	0	NA	Intergenic	MLT1F|LTR|MaLR	-8179	NM_007439	11682	Mm.311854	NM_007439	ENSMUSG00000055471	Alk	CD246|Tcrz	anaplastic lymphoma kinase	protein-coding
unique_peak2-32645-3-14--2.3208736855678-2.58603100924543	chr1	131643336	131643913	+	0	NA	intron (NM_172485, intron 7 of 27)	B4A|SINE|B4	473743	NM_172485	210417	Mm.380518	NM_172485	ENSMUSG00000042581	Thsd7b	1700074E13Rik|B930082A18|D130067I03Rik	thrombospondin, type I, domain containing 7B	protein-coding
common_peak2-27869-10-10--0.103016273628528-0.301029995663987	chr3	159495462	159495809	+	0	NA	Intergenic	RSINE1|SINE|B4	-7024	NR_037590	68151	Mm.6766	NM_026582		Wls	5031439A09Rik|AI173978|AI987742|Gpr177	wntless homolog (Drosophila)	protein-coding
common_peak1-14451-17-12-0.517856620063946-0.647240723060192	chr3	89390425	89391385	+	0	NA	intron (NM_080466, intron 2 of 7)	intron (NM_080466, intron 2 of 7)	66819	NM_080466	140493	Mm.120250	NM_080466		Kcnn3	KCa2.3|SK3|SKCA3	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	protein-coding
unique_peak1-3260-13-1-2.77847203063777-3.64038867156802	chr18	65593397	65594015	+	0	NA	intron (NM_172833, intron 1 of 15)	intron (NM_172833, intron 1 of 15)	3055	NM_172833	240354	Mm.132613	NM_172833	ENSMUSG00000032688	Malt1	A630046N12|D430033E09Rik	mucosa associated lymphoid tissue lymphoma translocation gene 1	protein-coding
unique_peak1-3830-14-6-1.09186123830004-1.16633110333236	chr2	172965433	172966183	+	0	NA	Intergenic	Intergenic	-12766	NM_011044	18534	Mm.266867	NM_011044	ENSMUSG00000027513	Pck1	AI265463|PEPCK|Pck-1	phosphoenolpyruvate carboxykinase 1, cytosolic	protein-coding
common_peak2-22349-8-5-0.420259917226415-1.10484139239135	chr13	24553216	24553557	+	0	NA	intron (NM_001284520, intron 11 of 14)	RLTR21|LTR|ERVK	46395	NM_001284520	12763	Mm.8396	NM_007717	ENSMUSG00000016756	Cmah	-	cytidine monophospho-N-acetylneuraminic acid hydroxylase	protein-coding
common_peak1-12571-10-17--0.813509656433543-0.699649909729472	chr18	11051769	11052302	+	0	NA	promoter-TSS (NM_010258)	promoter-TSS (NM_010258)	-473	NM_010258	14465	Mm.329287	NM_010258	ENSMUSG00000005836	Gata6	AA410133|GATA-6	GATA binding protein 6	protein-coding
unique_peak1-1246-9-4-0.867685311516858-1.36011389749466	chr11	114964959	114965557	+	0	NA	intron (NM_001163753, intron 1 of 8)	intron (NM_001163753, intron 1 of 8)	12513	NM_001163753	58222	Mm.143789	NM_021411	ENSMUSG00000020732	Rab37	B230331O03Rik|B230354I04Rik	RAB37, member RAS oncogene family	protein-coding
common_peak2-22107-11-14--0.398197011356905-0.379391706698377	chr12	80365326	80365816	+	0	NA	intron (NM_001008550, intron 23 of 41)	B3|SINE|B2	31698	NM_001008550	211978	Mm.297919	NM_001008550	ENSMUSG00000066440	Zfyve26	4930465A13|9330197E15Rik|A630028O16Rik|Gm893|mKIAA0321	zinc finger, FYVE domain containing 26	protein-coding
unique_peak1-3188-11-2-1.92373108353046-2.32232533660526	chr18	49984845	49985464	+	0	NA	Intergenic	AT_rich|Low_complexity|Low_complexity	-7497	NM_001081371	240283	Mm.257790	NM_001081371	ENSMUSG00000037416	Dmxl1	C630007L23Rik|D030030C22	Dmx-like 1	protein-coding
unique_peak1-2697-8-3-1.00522241794757-1.39487600375387	chr16	87324472	87324998	+	0	NA	Intergenic	Intergenic	-29695	NM_001159331	67768	Mm.296532	NM_026366	ENSMUSG00000044442	N6amt1	5830445C04Rik|Hemk2|Pred28	N-6 adenine-specific DNA methyltransferase 1 (putative)	protein-coding
unique_peak2-33989-6-8--0.60452689106201-1.03789460276074	chr12	86082621	86083016	+	0	NA	Intergenic	L1Md_A|LINE|L1	31244	NM_023409	67963	Mm.282556	NM_023409	ENSMUSG00000021242	Npc2	2700012J19Rik|AA408070|AU045843|HE1	Niemann-Pick type C2	protein-coding
common_peak2-30266-20-26--0.266812717572275-0.373496418836697	chr7	16047712	16048347	+	0	NA	Intergenic	L1Md_T|LINE|L1	73829	NM_145708	246792	Mm.26391	NM_145708	ENSMUSG00000074369	Obox2	-	oocyte specific homeobox 2	protein-coding
common_peak2-22489-16-22--0.405298313788951-0.440610794044987	chr13	49581630	49582511	+	0	NA	intron (NM_025495, intron 5 of 7)	intron (NM_025495, intron 5 of 7)	-18109	NM_001012324	407800	Mm.386931	NM_001012324	ENSMUSG00000043631	Ecm2	9030618O22Rik|BC065151|tenonectin	extracellular matrix protein 2, female organ and adipocyte specific	protein-coding
common_peak1-15445-34-47--0.20289397371989-0.362058538051628	chr4	95160953	95161947	+	0	NA	Intergenic	MLT1B|LTR|MaLR	-62748	NM_001113412	75578	Mm.276098	NM_029347	ENSMUSG00000028573	Fggy	2310009E04Rik	FGGY carbohydrate kinase domain containing	protein-coding
common_peak2-28556-11-9-0.186765489364251-0.344532117358383	chr5	5320198	5320657	+	0	NA	intron (NM_011074, intron 2 of 14)	intron (NM_011074, intron 2 of 14)	59824	NM_011074	18647	Mm.389061	NM_011074	ENSMUSG00000028926	Cdk14	Pftk1|mKIAA0834	cyclin-dependent kinase 14	protein-coding
common_peak1-16425-55-103--0.49581984698839-1.33745248687389	chr5	130254412	130255685	+	0	NA	intron (NM_008095, intron 7 of 9)	intron (NM_008095, intron 7 of 9)	24098	NM_008095	14467	Mm.12468	NM_008095	ENSMUSG00000029432	Gbas	AV006093|Nipsnap2	glioblastoma amplified sequence	protein-coding
unique_peak1-1814-21-9-1.24756117037887-1.83731222263754	chr14	30634957	30635724	+	0	NA	Intergenic	L1_Mur2|LINE|L1	-100290	NM_009785	12294	Mm.386754	NM_009785	ENSMUSG00000021991	Cacna2d3	Cacnad3	calcium channel, voltage-dependent, alpha2/delta subunit 3	protein-coding
unique_peak2-33305-6-9--0.75652998450706-1.11707584880836	chr11	5261186	5261622	+	0	NA	intron (NM_001080924, intron 1 of 8)	RLTR10|LTR|ERVK	20339	NM_001290501	407821	Mm.216313	NM_001080924	ENSMUSG00000041961	Znrf3	Gm1167	zinc and ring finger 3	protein-coding
common_peak1-15792-62-90--0.0970431813966117-0.332055252013198	chr4	155704059	155706050	+	0	NA	Intergenic	Intergenic	-96088	NM_198305	231003	Mm.423038	NM_198305	ENSMUSG00000078484	Klhl17	AL022703|BC058738	kelch-like 17	protein-coding
unique_peak2-37974-20-45--1.03548717146582-2.05089002217436	chr6	145865503	145866835	+	0	NA	Intergenic	Intergenic	-16498	NM_010656	16651	Mm.49689	NM_010656	ENSMUSG00000030255	Sspn	Krag	sarcospan	protein-coding
unique_peak2-34841-5-4--0.0263084308932156-0.909929411522249	chr15	75968860	75969125	+	0	NA	Intergenic	Intergenic	-12006	NM_001142968	271278	Mm.205253	NM_198172	ENSMUSG00000044361	BC024139	6230424I18Rik	cDNA sequence BC024139	protein-coding
common_peak2-29824-6-9--0.75652998450706-1.11707584880836	chr6	91726995	91727440	+	0	NA	intron (NM_001159507, intron 17 of 23)	intron (NM_001159507, intron 17 of 23)	30170	NM_001159507	243547	Mm.333264	NM_001033353	ENSMUSG00000030098	Grip2	-	glutamate receptor interacting protein 2	protein-coding
common_peak2-28801-9-7-0.18961340640422-1.05908390183068	chr5	64807592	64807946	+	0	NA	Intergenic	ORR1A2|LTR|MaLR	51412	NR_040681	69999	Mm.261413	NR_040681		1700027F09Rik	-	RIKEN cDNA 1700027F09 gene	ncRNA
common_peak1-18987-10-5-0.771452844287613-1.33892459842472	chr9	57520438	57521087	+	0	NA	Intergenic	Intergenic	10700	NM_009993	13077	Mm.15537	NM_009993	ENSMUSG00000032310	Cyp1a2	CP12|Cyp1a1|P450-3	cytochrome P450, family 1, subfamily a, polypeptide 2	protein-coding
unique_peak2-39841-6-7--0.434601889619698-0.97990265578305	chrX	52988837	52989294	+	0	NA	Intergenic	L1_Mm|LINE|L1	184292	NM_001220497	100039055	Mm.380174	NM_001220497		Gm16404	EG625711	predicted gene 16404	protein-coding
common_peak2-23803-50-139--1.08834270046601-6.07159457143302	chr15	100038435	100039521	+	0	NA	intron (NM_001159361, intron 35 of 37)	ORR1C2|LTR|MaLR	-19312	NM_007497	11908	Mm.676	NM_007497	ENSMUSG00000023027	Atf1	-	activating transcription factor 1	protein-coding
common_peak1-12497-43-50-0.110137843552208-0.352751277022878	chr17	87530351	87532139	+	0	NA	intron (NM_019654, intron 2 of 2)	intron (NM_019654, intron 2 of 2)	24226	NM_019654	56468	Mm.126885	NM_019654	ENSMUSG00000037104	Socs5	1810018L08Rik|Cish5|mKIAA0671	suppressor of cytokine signaling 5	protein-coding
unique_peak1-5391-9-1-2.18961340640422-2.31132995230379	chr5	103697026	103697571	+	0	NA	intron (NR_040699, intron 4 of 6)	intron (NR_040699, intron 4 of 6)	30750	NR_040699	74624	Mm.389662	NR_040699		4930429D17Rik	-	RIKEN cDNA 4930429D17 gene	ncRNA
unique_peak2-36410-5-12--1.40482005414695-1.62698961692433	chr2	127182599	127183121	+	0	NA	3' UTR (NM_001291003, exon 9 of 9)	3' UTR (NM_001291003, exon 9 of 9)	-6162	NM_009633	11552	Mm.347390	NM_009633	ENSMUSG00000058620	Adra2b	Adra-2b|[a]2B|alpha2-C2|alpha2B	adrenergic receptor, alpha 2b	protein-coding
common_peak1-11082-26-20-0.535581669379702-0.738267116931592	chr15	59197813	59198750	+	0	NA	intron (NM_153548, intron 5 of 28)	MER46C|DNA|MER2_type	7426	NM_153548	223593	Mm.218665	NM_153548	ENSMUSG00000022350	E430025E21Rik	AL022848|C76463|Kiaa0196|mKIAA0196|strumpellin	RIKEN cDNA E430025E21 gene	protein-coding
unique_peak1-6013-7-5-0.214128329577033-1.01466476204226	chr6	108700025	108700517	+	0	NA	Intergenic	RMER17B|LTR|ERVK	-32782	NM_026011	67166	Mm.271178	NM_026011	ENSMUSG00000030105	Arl8b	2610313E07Rik|3100002J04Rik|Arl10c|gie1	ADP-ribosylation factor-like 8B	protein-coding
common_peak1-16236-12-7-0.648775985087639-0.697979855752659	chr5	103735613	103736128	+	0	NA	Intergenic	Lx9|LINE|L1	-7822	NR_040699	74624	Mm.389662	NR_040699		4930429D17Rik	-	RIKEN cDNA 4930429D17 gene	ncRNA
common_peak2-31971-15-27--0.795190171501948-0.918917574080418	chr9	67048868	67049924	+	0	NA	Intergenic	MERVL-int|LTR|ERVL	35137	NR_029576	387185		NR_029576		Mir190a	Mir190|Mirn190|mir-190|mmu-mir-190|mmu-mir-190a	microRNA 190a	ncRNA
common_peak2-19824-47-72--0.25498313411347-0.498810849059171	chr1	89106995	89109201	+	0	NA	3' UTR (NM_009604, exon 12 of 12)	3' UTR (NM_009604, exon 12 of 12)	-2391	NM_023314	26987	Mm.227183	NM_023314	ENSMUSG00000026254	Eif4e2	2700069E09Rik|AI036339|AV129531|D0H0S6743E|Eif4el3	eukaryotic translation initiation factor 4E member 2	protein-coding
unique_peak1-6706-9-1-2.18961340640422-2.31132995230379	chr8	34646918	34647460	+	0	NA	Intergenic	Intergenic	-33827	NM_031374	104271	Mm.280624	NM_031374	ENSMUSG00000009628	Tex15	2210014E14Rik|AL022622|AU022940	testis expressed gene 15	protein-coding
common_peak2-23396-23-13-0.914412582451476-1.26025077975594	chr15	58872213	58872754	+	0	NA	intron (NM_001146180, intron 3 of 13)	intron (NM_001146180, intron 3 of 13)	41098	NM_001146180	211401	Mm.215481	NM_144800	ENSMUSG00000022353	Mtss1	2310003N14Rik|BC024131|D130001D01Rik|Mim|mKIAA0429	metastasis suppressor 1	protein-coding
unique_peak2-34983-6-7--0.434601889619698-0.97990265578305	chr15	99032183	99032555	+	0	NA	intron (NM_139140, intron 9 of 12)	B3|SINE|B2	-23038	NM_010601	16512	Mm.374793	NM_010601	ENSMUSG00000037579	Kcnh3	AU019351|C030044P22Rik|Elk2|Kv12.2|Melk2	potassium voltage-gated channel, subfamily H (eag-related), member 3	protein-coding
common_peak2-31574-36-28-0.621340091040183-1.16863888781394	chr8	119436459	119437724	+	0	NA	intron (NM_026844, intron 1 of 3)	intron (NM_026844, intron 1 of 3)	8245	NM_026844	66531	Mm.4011	NM_026844	ENSMUSG00000014633	Cmc2	1110046L09Rik|2310061C15Rik|DC13	COX assembly mitochondrial protein 2	protein-coding
common_peak2-26813-30-34-0.0403923925469067-0.31344009820369	chr2	151038725	151039893	+	0	NA	Intergenic	MER68|LTR|ERVL	-88466	NR_040747	74660	Mm.170672	NR_040747	ENSMUSG00000087609	4930442J19Rik	1700029E19Rik|Gm14152|OTTMUSG00000015807	RIKEN cDNA 4930442J19 gene	ncRNA
unique_peak1-4129-8-4-0.683294323060208-1.21878474469819	chr2	90612836	90613327	+	0	NA	intron (NM_018828, intron 12 of 16)	B3A|SINE|B2	-9820	NM_178755	271813	Mm.61146	NM_178755	ENSMUSG00000040812	Agbl2	4930524K04|A430081C19Rik|CCP2	ATP/GTP binding protein-like 2	protein-coding
unique_peak1-1486-12-4-1.32684789020028-2.04196296489515	chr12	117672134	117672718	+	0	NA	intron (NM_133762, intron 16 of 28)	intron (NM_133762, intron 16 of 28)	28551	NM_133762	76044	Mm.491196	NM_133762	ENSMUSG00000042029	Ncapg2	5830426I05Rik|Luzp5|Mtb|mCAP-G2	non-SMC condensin II complex, subunit G2	protein-coding
common_peak1-13984-39-82--0.759278184427771-2.12576351360238	chr2	102900665	102902207	+	0	NA	intron (NM_175094, intron 1 of 10)	intron (NM_175094, intron 1 of 10)	12234	NM_175094	27402	Mm.315011	NM_175094	ENSMUSG00000010914	Pdhx	AI481367|E3bp|Pdx1	pyruvate dehydrogenase complex, component X	protein-coding
common_peak1-12742-68-47-0.98499827857714-3.89468630297453	chr18	56974480	56975912	+	0	NA	intron (NM_177115, intron 1 of 4)	intron (NM_177115, intron 1 of 4)	107729	NM_010721	16906	Mm.4105	NM_010721	ENSMUSG00000024590	Lmnb1	-	lamin B1	protein-coding
common_peak2-26387-46-116--0.972368776334603-4.23828147057546	chr2	51146982	51149072	+	0	NA	intron (NR_040636, intron 1 of 2)	Lx9|LINE|L1	50676	NR_040636	329404	Mm.417725	NR_040636	ENSMUSG00000086349	Gm13497	A730015I17|OTTMUSG00000012425	predicted gene 13497	ncRNA
common_peak2-31970-19-15-0.402687326661686-0.519193887192487	chr9	67047977	67048712	+	0	NA	Intergenic	MERVL-int|LTR|ERVL	36189	NR_029576	387185		NR_029576		Mir190a	Mir190|Mirn190|mir-190|mmu-mir-190|mmu-mir-190a	microRNA 190a	ncRNA
common_peak2-29739-80-120--0.0682874709052426-0.324132509221855	chr6	85960757	85962052	+	0	NA	Intergenic	B3|SINE|B2	-5781	NM_012013	26910	Mm.8024	NM_012013	ENSMUSG00000030001	Figla	bHLHc8	folliculogenesis specific basic helix-loop-helix	protein-coding
common_peak2-25102-16-24--0.525592547506663-0.561823156887258	chr18	36678796	36679455	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-3666	NM_010415	15200	Mm.289681	NM_010415	ENSMUSG00000024486	Hbegf	AW047313|Dtr|Dts|Hegfl	heparin-binding EGF-like growth factor	protein-coding
common_peak1-9587-17-9-0.896368243317676-1.09394599973099	chr11	119056442	119057222	+	0	NA	intron (NM_172443, intron 3 of 11)	intron (NM_172443, intron 3 of 11)	32981	NM_172443	207592	Mm.205263	NM_172443	ENSMUSG00000039976	Tbc1d16	B930087K01|BC026530|Tcd1d16	TBC1 domain family, member 16	protein-coding
unique_peak2-37947-3-5--0.998945590680433-0.96108193396963	chr5	149607591	149608023	+	0	NA	Intergenic	Intergenic	54391	NR_028285	70138	Mm.417834	NR_028285	ENSMUSG00000086494	2210417A02Rik	AV081004	RIKEN cDNA 2210417A02 gene	ncRNA
common_peak2-23719-7-6--0.00826409175941478-0.97990265578305	chr15	90223766	90224177	+	0	NA	Intergenic	Intergenic	169180	NR_106106	102466838		NR_106106		Mir7648	mmu-mir-7648	microRNA mir-7648	ncRNA
unique_peak2-39947-5-15--1.70438033600585-1.4372489031793	chrX	136270171	136270893	+	0	NA	intron (NM_001081499, intron 12 of 20)	RMER4A|LTR|ERVK	46360	NM_001037915	622473	Mm.391312	NM_001037915	ENSMUSG00000072945	Ripply1	-	ripply1 homolog (zebrafish)	protein-coding
unique_peak1-2775-8-6-0.197867495889966-1.03789460276074	chr17	6679794	6680390	+	0	NA	Intergenic	Intergenic	-25028	NM_001166627	100040531	Mm.457987	NM_001166627	ENSMUSG00000095677	Dynlt1f	100040631|Dynlt1e	dynein light chain Tctex-type 1F	protein-coding
unique_peak2-35328-7-24--1.84476535947653-2.44150343356329	chr17	21733434	21734105	+	0	NA	Intergenic	Intergenic	29759	NM_001002008	381066	Mm.441097	NM_001002008	ENSMUSG00000067931	Zfp948	-	zinc finger protein 948	protein-coding
unique_peak2-37581-10-16--0.73104749624157-0.604422558181019	chr5	36380111	36380754	+	0	NA	intron (NM_030889, intron 16 of 26)	intron (NM_030889, intron 16 of 26)	144464	NM_027373	70292	Mm.125167	NM_027373	ENSMUSG00000029094	Afap1	2600003E23Rik|9630044L16Rik|AI848729|Afap|mKIAA3018	actin filament associated protein 1	protein-coding
unique_peak1-2209-10-2-1.77145284428761-2.09384600808989	chr15	68172260	68172895	+	0	NA	TTS (NR_029718)	TTS (NR_029718)	274	NR_029718	387228		NR_029718	miRBase:MI0000549	Mir30d	Mirn30d|mmu-mir-30d	microRNA 30d	ncRNA
common_peak1-11289-21-31--0.430510734733764-0.49501414494053	chr15	83349460	83350312	+	0	NA	Intergenic	Intergenic	-7406	NM_007546	12124	Mm.267006	NM_007546	ENSMUSG00000016758	Bik	Biklk|Blk|Nbk	BCL2-interacting killer	protein-coding
unique_peak1-4909-7-0-2.79909083029819-2.40823996531185	chr4	46664371	46664898	+	0	NA	Intergenic	Intergenic	-1563	NM_198664	381605	Mm.331595	NM_198664	ENSMUSG00000039813	Tbc1d2	A630005A06Rik|BC022630|Gm1037|PARIS-1|PARIS1	TBC1 domain family, member 2	protein-coding
common_peak2-25295-42-69--0.386953689077782-0.699241046598679	chr18	70529695	70531509	+	0	NA	Intergenic	L2|LINE|L2	-101506	NM_029019	170461	Mm.83623	NM_029019	ENSMUSG00000079608	Stard6	1700011K09Rik|4833424I06Rik|4933429L05Rik|AI644424	StAR-related lipid transfer (START) domain containing 6	protein-coding
common_peak1-19032-52-36-0.898806624636749-2.59178042653149	chr9	64172575	64173905	+	0	NA	intron (NM_001001295, intron 5 of 16)	intron (NM_001001295, intron 5 of 16)	15024	NM_172519	213550	Mm.268341	NM_172519	ENSMUSG00000032396	Dis3l	AV340375	DIS3 mitotic control homolog (S. cerevisiae)-like	protein-coding
common_peak1-15169-57-83--0.126284382699832-0.34989958244832	chr3	152121345	152123071	+	0	NA	3' UTR (NM_001080755, exon 14 of 14)	3' UTR (NM_001080755, exon 14 of 14)	62560	NM_001287139	108946	Mm.379292	NM_198416	ENSMUSG00000039068	Zzz3	3110065C23Rik|6430567E01Rik|AA408566|AI481057|AW556059|R75514	zinc finger, ZZ domain containing 3	protein-coding
unique_peak1-865-17-6-1.41094141614743-1.84350559086818	chr11	22617150	22617750	+	0	NA	Intergenic	Intergenic	142285	NM_016888	53625	Mm.395495	NM_016888	ENSMUSG00000051650	B3gnt2	AA408337|AA409404|AW260308|B3Galt6|B3gnt1|BGnT-1|BGnT-2|BGnT1|BGnT2|Beta3gnt	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2	protein-coding
common_peak1-14692-54-58-0.290442712267892-0.629057001794454	chr3	66985390	66986473	+	0	NA	intron (NM_025822, intron 5 of 9)	intron (NM_025822, intron 5 of 9)	-192088	NM_010801	17349	Mm.10414	NM_010801	ENSMUSG00000048416	Mlf1	HLS7	myeloid leukemia factor 1	protein-coding
unique_peak1-7224-10-4-1.03448725012141-1.5150158574804	chr9	71695509	71696025	+	0	NA	intron (NM_001253862, intron 19 of 19)	intron (NM_001253862, intron 19 of 19)	48136	NM_001253864	21406	Mm.171615	NM_011544	ENSMUSG00000032228	Tcf12	A130037E08Rik|ALF1|HEB|HEBAlt|HTF-4|HTF4|ME1|REB|bHLHb20	transcription factor 12	protein-coding
common_peak1-17213-29-31-0.112290080615111-0.353704024845522	chr6	125377057	125378410	+	0	NA	Intergenic	RLTR14|LTR|ERV1	-47211	NM_198604	213522	Mm.333396	NM_198604	ENSMUSG00000038167	Plekhg6	BC026778|Gm155	pleckstrin homology domain containing, family G (with RhoGef domain) member 6	protein-coding
unique_peak1-3821-10-2-1.77145284428761-2.09384600808989	chr2	118521712	118522153	+	0	NA	intron (NM_001145854, intron 9 of 9)	intron (NM_001145854, intron 9 of 9)	7767	NM_001081971	383787	Mm.35758	NM_001081971	ENSMUSG00000078137	Ankrd63	Gm1337	ankyrin repeat domain 63	protein-coding
unique_peak1-6945-6-2-0.980435609659146-1.26211192963361	chr8	111096168	111096687	+	0	NA	intron (NR_077224, intron 1 of 1)	intron (NR_077224, intron 1 of 1)	12150	NR_077224	109215	Mm.65282	NR_077224		3010033K07Rik	-	RIKEN cDNA 3010033K07 gene	ncRNA
common_peak2-24922-15-14-0.105274154947137-0.330004445983672	chr17	87246497	87247187	+	0	NA	Intergenic	Lx|LINE|L1	-69846	NM_001277980	78469	Mm.67234	NM_030104	ENSMUSG00000037689	Tmem247	1700090G07Rik	transmembrane protein 247	protein-coding
common_peak2-31204-40-48-0.0442658386358898-0.320773676263618	chr8	61487692	61488460	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	97524	NM_173411	234290	Mm.39244	NM_173411	ENSMUSG00000049946	BC030500	-	cDNA sequence BC030500	protein-coding
common_peak2-29021-20-22--0.03548717146582-0.301029995663994	chr5	113156100	113156976	+	0	NA	intron (NM_028901, intron 39 of 43)	intron (NM_028901, intron 39 of 43)	-65774	NR_040675	67360	Mm.59218	NR_040675	ENSMUSG00000098230	1700095B10Rik	-	RIKEN cDNA 1700095B10 gene	ncRNA
common_peak1-16569-19-12-0.702247608520594-0.840839978588874	chr5	146681490	146682271	+	0	NA	intron (NM_007818, intron 4 of 12)	RMER17D|LTR|ERVK	9550	NM_007818	13112	Mm.332844	NM_007818	ENSMUSG00000056035	Cyp3a11	AI256190|Cyp3a|IIIAm1|Pcn	cytochrome P450, family 3, subfamily a, polypeptide 11	protein-coding
unique_peak1-2229-11-1-2.50869358425161-2.83420869758413	chr15	75269229	75269823	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-7267	NR_108041	105892	Mm.38909	NM_001039720	ENSMUSG00000053168	9030619P08Rik	-	lymphocyte antigen 6 complex pseudogene	pseudo
common_peak2-25387-14-21--0.560215458279653-0.519193887192484	chr18	90510217	90510685	+	0	NA	Intergenic	Intergenic	-169095	NM_198295	67988	Mm.268041	NM_198295	ENSMUSG00000024614	Tmx3	6430411B10Rik|A730024F05Rik|AV259382|Txndc10|mKIAA1830	thioredoxin-related transmembrane protein 3	protein-coding
unique_peak2-32824-6-19--1.75652998450706-1.84350559086818	chr1	186703768	186704747	+	0	NA	intron (NM_178692, intron 1 of 1)	L1MB5|LINE|L1	2658	NM_178692	226777	Mm.169542	NM_178692	ENSMUSG00000039349	C130074G19Rik	-	RIKEN cDNA C130074G19 gene	protein-coding
common_peak1-14666-31-32-0.18084455145467-0.379775532323848	chr3	58882047	58883370	+	0	NA	intron (NM_177855, intron 10 of 43)	intron (NM_177855, intron 10 of 43)	23035	NM_173398	229323	Mm.123648	NM_173398	ENSMUSG00000050075	Gpr171	A630006E05|F730001G15Rik|H963	G protein-coupled receptor 171	protein-coding
common_peak2-30201-12-7-0.648775985087639-0.697979855752659	chr7	64192234	64192703	+	0	NA	intron (NM_008074, intron 5 of 9)	Lx8|LINE|L1	449773	NM_008074	14407	Mm.434343	NM_008074		Gabrg3	B230362M20Rik|Gabrg-3	gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3	protein-coding
common_peak1-19050-11-12--0.191746133889479-0.310474156842889	chr9	65884939	65885638	+	0	NA	intron (NM_173185, intron 13 of 13)	B1_Mus1|SINE|Alu	-22688	NM_011149	19035	Mm.335249	NM_011149	ENSMUSG00000032383	Ppib	AA408962|AA553318|AI844835|Cphn-2|Cphn2|CyP-20b	peptidylprolyl isomerase B	protein-coding
unique_peak1-5718-14-7-0.899216160357645-0.947446088118041	chr6	41548569	41549229	+	0	NA	Intergenic	MLT1D|LTR|MaLR	-6582	NM_001146351	13848	Mm.271976	NM_007680	ENSMUSG00000029869	Ephb6	Cekl|Mep	Eph receptor B6	protein-coding
common_peak1-13209-91-31-2.07343194560234-15.561337916924	chr19	24016614	24018417	+	0	NA	intron (NM_177034, intron 10 of 12)	intron (NM_177034, intron 10 of 12)	87994	NM_001114174	381217	Mm.426078	NM_001114174	ENSMUSG00000071604	Fam189a2	AI414343|AI666772|Gm967	family with sequence similarity 189, member A2	protein-coding
unique_peak2-35382-4-4--0.345388608740609-0.864171920961574	chr17	29438321	29438619	+	0	NA	3' UTR (NM_030561, exon 9 of 9)	3' UTR (NM_030561, exon 9 of 9)	-17357	NM_023734	74116	Mm.30950	NM_023734	ENSMUSG00000024011	Pi16	1200009H11Rik|Cripi|PI-16	peptidase inhibitor 16	protein-coding
unique_peak1-4619-12-2-2.06381348436648-2.79529063155376	chr3	69598265	69598930	+	0	NA	Intergenic	A-rich|Low_complexity|Low_complexity	65219	NM_001164210	66183	Mm.45481	NM_133675	ENSMUSG00000043461	Sptssb	1110032A04Rik|ADMP|Sssptb	serine palmitoyltransferase, small subunit B	protein-coding
unique_peak1-4805-12-2-2.06381348436648-2.79529063155376	chr3	136577287	136578067	+	0	NA	intron (NM_008913, intron 10 of 13)	intron (NM_008913, intron 10 of 13)	244647	NM_001293622	19055	Mm.331389	NM_008913	ENSMUSG00000028161	Ppp3ca	2900074D19Rik|CN|Caln|Calna|CnA	protein phosphatase 3, catalytic subunit, alpha isoform	protein-coding
unique_peak1-330-8-6-0.197867495889966-1.03789460276074	chr1	133223428	133223992	+	0	NA	intron (NM_001081011, intron 13 of 22)	intron (NM_001081011, intron 13 of 22)	-47570	NM_019777	56489	Mm.386783	NM_019777	ENSMUSG00000042349	Ikbke	AW558201|IKK-i|IKKepsilon|Ikki	inhibitor of kappaB kinase epsilon	protein-coding
common_peak1-9671-53-61-0.186776702029054-0.465693198848476	chr12	4906972	4908207	+	0	NA	intron (NM_145441, intron 2 of 6)	RLTR12A|LTR|ERVK	6737	NM_145441	217379	Mm.259170	NM_145441	ENSMUSG00000020634	Ubxn2a	6330407P03Rik|Ubxd4	UBX domain protein 2A	protein-coding
common_peak1-13461-40-66--0.407113507706674-0.719772390806939	chr19	60580312	60581097	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-36497	NM_201615	226278	Mm.377241	NM_201615	ENSMUSG00000045052	Prlhr	Gm339|Gpr10|Gr3|Prrpr	prolactin releasing hormone receptor	protein-coding
common_peak2-31379-25-46--0.692738946332532-1.14508711250721	chr8	85298773	85299946	+	0	NA	Intergenic	Intergenic	-1334	NM_145600	30932	Mm.269248	NM_145600	ENSMUSG00000031711	Zfp330	BC008086|Noa36|Znf330	zinc finger protein 330	protein-coding
common_peak2-28276-27-24-0.347689761120511-0.550049347815233	chr4	129247793	129248464	+	0	NA	intron (NM_001162433, intron 1 of 12)	intron (NM_001162433, intron 1 of 12)	2757	NM_001162433	16818	Mm.293753	NM_010693	ENSMUSG00000000409	Lck	Hck-3|Lsk|Lskt|p56<lck>|p56Lck	lymphocyte protein tyrosine kinase	protein-coding
common_peak2-23181-65-86-0.0492224436283992-0.320772353720356	chr15	51853079	51855564	+	0	NA	Intergenic	L1Md_T|LINE|L1	-17332	NM_175503	239435	Mm.24204	NM_175503	ENSMUSG00000068522	Aard	A5D3|AV328152	alanine and arginine rich domain containing protein	protein-coding
common_peak2-30590-5-6--0.511735258063458-0.947717972411649	chr7	80824649	80825033	+	0	NA	Intergenic	L1Md_F2|LINE|L1	6608	NR_033604	244061	Mm.484605	NR_033604		Gm4971	EG244061	Smad nuclear interacting protein 1 pseudogene	pseudo
unique_peak2-37160-3-8--1.58390809140159-1.39487600375387	chr4	43396770	43397152	+	0	NA	intron (NM_001037709, intron 1 of 11)	MER53|DNA|hAT	2107	NM_001037709	100213	Mm.235730	NM_199057	ENSMUSG00000035969	Rusc2	AI840675|mKIAA0375	RUN and SH3 domain containing 2	protein-coding
common_peak2-32013-3-8--1.58390809140159-1.39487600375387	chr9	73806417	73806847	+	0	NA	Intergenic	Intergenic	-25258	NM_001081153	208898	Mm.41035	NM_001081153	ENSMUSG00000062151	Unc13c	1500037O19Rik|AU019458|D9Ertd414e|Munc13-3|Unc13h3	unc-13 homolog C (C. elegans)	protein-coding
common_peak1-10207-57-42-0.839768285376831-2.56976710895951	chr13	48565735	48566954	+	0	NA	Intergenic	ORR1B2|LTR|MaLR	42435	NM_001164575	67911	Mm.251375	NM_026450	ENSMUSG00000050954	Zfp169	1700025J14Rik|4930429A13Rik|BE688704	zinc finger protein 169	protein-coding
common_peak1-19515-16-21--0.341167976369236-0.392630012299441	chrX	169880541	169881396	+	0	NA	Intergenic	Intergenic	-3464119	NR_029457	654820	Mm.34441	NM_001039559	ENSMUSG00000072844	G530011O06Rik	-	RIKEN cDNA G530011O06 gene	ncRNA
common_peak2-24235-14-4-1.57728806547028-2.4322161449009	chr16	90196493	90196918	+	0	NA	Intergenic	Intergenic	-24282	NM_011434	20655	Mm.276325	NM_011434	ENSMUSG00000022982	Sod1	B430204E11Rik|Cu/Zn-SOD|CuZnSOD|Ipo-1|Ipo1|SODC|Sod-1	superoxide dismutase 1, soluble	protein-coding
common_peak1-13266-42-45-0.218767371810171-0.478941451571433	chr19	36119126	36120738	+	0	NA	intron (NM_008315, intron 1 of 2)	intron (NM_008315, intron 1 of 2)	11918	NM_008315	15566	Mm.254266	NM_008315	ENSMUSG00000024798	Htr7	5-HT7	5-hydroxytryptamine (serotonin) receptor 7	protein-coding
common_peak2-25347-11-8-0.338768582809301-1.14218153353838	chr18	79008656	79009081	+	0	NA	intron (NM_053099, intron 4 of 5)	intron (NM_053099, intron 4 of 5)	-215179	NM_030683	27411	Mm.44158	NM_030683	ENSMUSG00000024552	Slc14a2	UT-A1|UT-A3	solute carrier family 14 (urea transporter), member 2	protein-coding
common_peak1-8536-47-62--0.042438498733369-0.302795439836264	chr10	91123045	91124105	+	0	NA	Intergenic	Intergenic	411355	NR_029812	723955		NR_029812	miRBase:MI0000715	Mir135a-2	Mirn135a-2	microRNA 135a-2	ncRNA
unique_peak1-775-7-5-0.214128329577033-1.01466476204226	chr10	128960255	128960703	+	0	NA	Intergenic	L1MA7|LINE|L1	-2806	NM_146930	258932	Mm.377754	NM_146930	ENSMUSG00000047626	Olfr791	MOR114-1	olfactory receptor 791	protein-coding
common_peak2-20376-21-22-0.0459273092092225-0.319918318021793	chr10	17575184	17576003	+	0	NA	Intergenic	RMER3D-int|LTR|ERVK	59568	NM_138628	378431	Mm.283493	NM_138628	ENSMUSG00000039891	Txlnb	2310001N14Rik|Mdp77	taxilin beta	protein-coding
common_peak1-11662-13-10-0.319040412000471-0.446472590016315	chr16	25041580	25042243	+	0	NA	Intergenic	Intergenic	-17814	NR_040374	319487	Mm.137341	NR_040374	ENSMUSG00000096960	A230028O05Rik	-	RIKEN cDNA A230028O05 gene	ncRNA
common_peak1-15536-17-10-0.75886471956774-0.917676348953458	chr4	118686287	118687084	+	0	NA	Intergenic	URR1B|DNA|MER1_type	52113	NM_133892	100470	Mm.26698	NM_133892	ENSMUSG00000024903	Lao1	AW990848	L-amino acid oxidase 1	protein-coding
unique_peak1-2175-7-1-1.79909083029819-1.80617997398389	chr15	61541491	61541971	+	0	NA	intron (NR_040350, intron 3 of 4)	intron (NR_040350, intron 3 of 4)	64275	NR_040350	432956	Mm.404918	NR_040350		D030024E09Rik	-	RIKEN cDNA D030024E09 gene	ncRNA
common_peak1-10743-9-11--0.395349094316936-0.344532117358383	chr14	67715399	67715871	+	0	NA	Intergenic	B3A|SINE|B2	-24327	NM_001205188	71978	Mm.273997	NM_028032	ENSMUSG00000022052	Ppp2r2a	2410004D02Rik|mKIAA1541	protein phosphatase 2, regulatory subunit B, alpha	protein-coding
unique_peak1-2405-10-1-2.35641534500877-2.57096726280955	chr15	98742107	98742787	+	0	NA	intron (NM_029098, intron 5 of 16)	intron (NM_029098, intron 5 of 16)	6082	NM_029098	74775	Mm.385020	NM_029098	ENSMUSG00000022999	Lmbr1l	1110013E13Rik|AA415653|D15Ertd735e|Limr	limb region 1 like	protein-coding
common_peak1-9189-82-113-0.0603731301409933-0.334729014356514	chr11	79338789	79340562	+	0	NA	TTS (NM_001033711)	TTS (NM_001033711)	-2411	NM_001077496	216984	Mm.439665	NM_001077496		Evi2b	Evi-2|Evi2	ecotropic viral integration site 2b	protein-coding
common_peak2-27490-42-153--1.52445721282772-11.015429534059	chr3	94757449	94759082	+	0	NA	promoter-TSS (NM_017395)	promoter-TSS (NM_017395)	-672	NM_017395	53970	Mm.24308	NM_017395	ENSMUSG00000005774	Rfx5	-	regulatory factor X, 5 (influences HLA class II expression)	protein-coding
unique_peak2-37416-2-6--1.72480917832092-1.26211192963361	chr4	148527568	148527933	+	0	NA	intron (NM_001081274, intron 10 of 12)	B1_Mus1|SINE|Alu	13066	NM_001081274	110208	Mm.252080	NM_025801	ENSMUSG00000028961	Pgd	0610042A05Rik|AU019875|C78335	phosphogluconate dehydrogenase	protein-coding
unique_peak2-33392-6-8--0.60452689106201-1.03789460276074	chr11	50275931	50276276	+	0	NA	Intergenic	ORR1A2|LTR|MaLR	-31490	NM_172557	216724	Mm.390400	NM_172557	ENSMUSG00000020375	Rufy1	3000002E04Rik|Rabip4|ZFYVE12	RUN and FYVE domain containing 1	protein-coding
unique_peak2-36966-0-8--4.01005593191652-2.05605744720049	chr3	113277484	113278060	+	0	NA	promoter-TSS (NM_007446)	promoter-TSS (NM_007446)	-92	NM_007446	11722	Mm.439727	NM_007446	ENSMUSG00000074264	Amy1	Amy-1|Amy1a|C030014B17Rik	amylase 1, salivary	protein-coding
common_peak2-27373-8-10--0.454209200689727-1.078512453669	chr3	86010937	86011527	+	0	NA	Intergenic	ID_B1|SINE|B4	-17380	NM_001077688	80877	Mm.439825	NM_030695	ENSMUSG00000028080	Lrba	C80285|D3Ertd775e|Lab300|Lba	LPS-responsive beige-like anchor	protein-coding
unique_peak1-4802-13-1-2.77847203063777-3.64038867156802	chr3	135689312	135689907	+	0	NA	Intergenic	L1MCa|LINE|L1	-186376	NR_040540	71038	Mm.410798	NR_040540		4933401H06Rik	-	RIKEN cDNA 4933401H06 gene	ncRNA
unique_peak2-35607-4-7--1.02346051385325-1.09384600808989	chr17	82905404	82905637	+	0	NA	Intergenic	Intergenic	572045	NR_045094	100503434	Mm.187281	NR_045094		Gm19689	-	predicted gene, 19689	ncRNA
common_peak1-14579-37-48--0.0887167726293896-0.31027100108714	chr3	40799680	40800799	+	0	NA	Intergenic	Intergenic	45686	NM_001040399	214048	Mm.46782	NM_027663	ENSMUSG00000037814	Larp1b	1700108L22Rik|4933421B21Rik|AA690246|Larp2	La ribonucleoprotein domain family, member 1B	protein-coding
unique_peak2-34934-1-5--2.2120195109379-1.32905871926422	chr15	86091873	86092197	+	0	NA	intron (NM_145476, intron 4 of 12)	intron (NM_145476, intron 4 of 12)	47146	NM_145476	223754	Mm.28904	NM_145476	ENSMUSG00000051864	Tbc1d22a	BC023106|D15Ertd781e	TBC1 domain family, member 22a	protein-coding
common_peak1-14517-18-45--1.21064280482866-2.44377456520723	chr3	27454727	27455722	+	0	NA	intron (NM_173182, intron 3 of 25)	intron (NM_173182, intron 3 of 25)	28693	NR_037275	100526525		NR_037275		Mir3092	mmu-mir-3092	microRNA 3092	ncRNA
common_peak2-28488-13-11-0.193509529916613-0.379391706698377	chr4	155651857	155652307	+	0	NA	Intergenic	Intergenic	-43116	NM_198305	231003	Mm.423038	NM_198305	ENSMUSG00000078484	Klhl17	AL022703|BC058738	kelch-like 17	protein-coding
unique_peak2-38001-7-6--0.00826409175941478-0.97990265578305	chr6	29298592	29298893	+	0	NA	intron (NM_001285412, intron 1 of 6)	intron (NM_001285412, intron 1 of 6)	636	NM_184053	12321	Mm.392075	NM_007594	ENSMUSG00000029767	Calu	9530075H20Rik	calumenin	protein-coding
unique_peak2-34579-6-6--0.241956811677302-0.947717972411649	chr14	67942528	67942917	+	0	NA	intron (NM_010095, intron 7 of 16)	intron (NM_010095, intron 7 of 16)	-9174	NM_001037931	628416	Mm.390723	NM_001037931	ENSMUSG00000075549	Gm6878	EG628416	predicted gene 6878	protein-coding
common_peak2-31089-20-59--1.41881581101733-4.11074078025085	chr8	25600905	25602120	+	0	NA	Intergenic	Intergenic	-52094	NM_026931	69068	Mm.25775	NM_026931	ENSMUSG00000056313	1810011O10Rik	1110065B09Rik|AW121743|AW321058	RIKEN cDNA 1810011O10 gene	protein-coding
common_peak2-23972-9-5-0.604650905683064-1.21398586181642	chr16	17406035	17406370	+	0	NA	5' UTR (NM_023348, exon 1 of 5)	5' UTR (NM_023348, exon 1 of 5)	109	NM_023348	67474	Mm.271992	NM_023348	ENSMUSG00000022765	Snap29	1300018G05Rik|AI891940|AU020222|BB131856|Gs32	synaptosomal-associated protein 29	protein-coding
unique_peak1-7362-13-1-2.77847203063777-3.64038867156802	chrX	36743684	36744322	+	0	NA	Intergenic	Intergenic	44560	NM_001177380	78631	Mm.243738	NM_001177380	ENSMUSG00000079619	Cypt15	1700085A12Rik	cysteine-rich perinuclear theca 15	protein-coding
common_peak1-15653-13-9-0.456543935750406-0.53895475198017	chr4	135677550	135678217	+	0	NA	Intergenic	Intergenic	-21854	NM_008321	15903	Mm.110	NM_008321		Id3	Hlh462|Idb3|bHLHb25	inhibitor of DNA binding 3	protein-coding
unique_peak2-35910-9-11--0.395349094316936-0.344532117358383	chr19	5052171	5052748	+	0	NA	exon (NM_145495, exon 6 of 10)	exon (NM_145495, exon 6 of 10)	1651	NM_145495	225870	Mm.271922	NM_145495	ENSMUSG00000024883	Rin1	-	Ras and Rab interactor 1	protein-coding
common_peak2-20866-15-22--0.511397205501357-0.50761186003982	chr11	96829311	96829991	+	0	NA	intron (NM_030220, intron 1 of 6)	intron (NM_030220, intron 1 of 6)	9351	NM_030220	78912	Mm.491183	NM_030220	ENSMUSG00000018678	Sp2	4930480I16Rik|mKIAA0048	Sp2 transcription factor	protein-coding
common_peak2-19585-20-31--0.511925215408807-0.634510163964152	chr1	16656121	16657167	+	0	NA	intron (NM_027415, intron 1 of 2)	intron (NM_027415, intron 1 of 2)	1372	NM_026392	70397	Mm.194225	NM_026392	ENSMUSG00000025940	Tmem70	1110020A09Rik|2210416J16Rik	transmembrane protein 70	protein-coding
common_peak1-12243-8-4-0.683294323060208-1.21878474469819	chr17	35769967	35770476	+	0	NA	Intergenic	Intergenic	-6639	NM_001244654	672682	Mm.454025	NM_001244654	ENSMUSG00000090588	Gm9573	Muc21	predicted gene 9573	protein-coding
common_peak1-8701-29-16-1.02482723936477-1.87578206828671	chr11	82115411	82116818	+	0	NA	Intergenic	RMER17A|LTR|ERVK	-86288	NM_023438	270893	Mm.341593	NM_023438	ENSMUSG00000020701	Tmem132e	Gm644	transmembrane protein 132E	protein-coding
common_peak2-21994-32-39--0.0428360756677026-0.301029995663967	chr12	54729243	54729685	+	0	NA	intron (NM_013780, intron 3 of 11)	intron (NM_013780, intron 3 of 11)	379800	NM_013780	27386	Mm.247044	NM_013780	ENSMUSG00000021010	Npas3	4930423H22Rik|bHLHe12	neuronal PAS domain protein 3	protein-coding
unique_peak1-3358-9-2-1.60465090568306-1.87199725847353	chr19	40255472	40255901	+	0	NA	intron (NM_145499, intron 2 of 8)	intron (NM_145499, intron 2 of 8)	6090	NM_145499	226105	Mm.29119	NM_145499	ENSMUSG00000060613	Cyp2c70	-	cytochrome P450, family 2, subfamily c, polypeptide 70	protein-coding
unique_peak2-33629-1-5--2.2120195109379-1.32905871926422	chr11	97804876	97805231	+	0	NA	intron (NM_028199, intron 7 of 13)	B1_Mus1|SINE|Alu	42707	NM_028199	72324	Mm.39617	NM_028199	ENSMUSG00000017417	Plxdc1	2410003I07Rik|AI848450|Tem7	plexin domain containing 1	protein-coding
common_peak2-20838-15-13-0.204809828498052-0.368541233333383	chr11	20741726	20742218	+	0	NA	Intergenic	URR1A|DNA|MER1_type	-10861	NM_173752	216551	Mm.76694	NM_173752	ENSMUSG00000042363	Lgalsl	1110067D22Rik|A530071M23|Grpa|Hspc159|Lgalsla	lectin, galactoside binding-like	protein-coding
unique_peak2-36717-1-9--2.94898510510411-2.31132995230379	chr3	52017985	52018478	+	0	NA	Intergenic	MLT1B|LTR|MaLR	-54028	NM_019739	56458	Mm.29891	NM_019739	ENSMUSG00000044167	Foxo1	AI876417|Afxh|FKHR|Fkhr1|Foxo1a	forkhead box O1	protein-coding
unique_peak1-5649-42-14-1.83543873225867-5.75551916672625	chr6	29245678	29247660	+	0	NA	Intergenic	B3|SINE|B2	15528	NM_001101486	245884	Mm.33683	NM_001101486	ENSMUSG00000079652	Fam71f2	AI507611|GARI	family with sequence similarity 71, member F2	protein-coding
common_peak1-10251-10-15--0.643584654991231-0.519648556297791	chr13	54694087	54694786	+	0	NA	3' UTR (NM_028870, exon 5 of 5)	3' UTR (NM_028870, exon 5 of 5)	2844	NM_025933	67044	Mm.29353	NM_025933	ENSMUSG00000025868	Higd2a	2010110M21Rik|AA690237	HIG1 domain family, member 2A	protein-coding
common_peak2-29102-16-31--0.881736357731938-1.20073456579999	chr5	122613919	122614713	+	0	NA	intron (NM_013636, intron 1 of 6)	intron (NM_013636, intron 1 of 6)	6028	NM_013636	19047	Mm.280784	NM_013636	ENSMUSG00000004455	Ppp1cc	PP-1G|PP1|dis2m1	protein phosphatase 1, catalytic subunit, gamma isoform	protein-coding
common_peak1-17708-9-7-0.18961340640422-1.05908390183068	chr7	78972630	78973127	+	0	NA	Intergenic	MLT1A1|LTR|MaLR	478603	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding
unique_peak1-5184-20-8-1.31814978314888-1.77631109801764	chr5	30969654	30970727	+	0	NA	intron (NM_007681, intron 1 of 4)	RLTR12B|LTR|ERVK	915	NM_007681	12615	Mm.290563	NM_007681	ENSMUSG00000029177	Cenpa	Cenp-A	centromere protein A	protein-coding
common_peak2-31094-19-28--0.455293668465885-0.518921928796332	chr8	26015208	26016031	+	0	NA	intron (NM_001293693, intron 9 of 19)	intron (NM_001293693, intron 9 of 19)	43657	NM_001293693	353188	Mm.269223	NM_153397	ENSMUSG00000037437	Adam32	-	a disintegrin and metallopeptidase domain 32	protein-coding
common_peak2-31696-12-14--0.25811461052088-0.309074325783021	chr9	31211146	31211818	+	0	NA	intron (NM_172766, intron 16 of 25)	intron (NM_172766, intron 16 of 25)	17705	NM_172766	235134	Mm.238146	NM_172766	ENSMUSG00000042185	Nfrkb	A530090G11Rik	nuclear factor related to kappa B binding protein	protein-coding
common_peak2-22528-34-34-0.2527855100563-0.484230028934922	chr13	55362195	55362968	+	0	NA	intron (NM_008739, intron 6 of 22)	B2_Mm2|SINE|B2	51438	NM_008739	18193	Mm.12964	NM_008739	ENSMUSG00000021488	Nsd1	AI528500|KMT3B	nuclear receptor-binding SET-domain protein 1	protein-coding
common_peak1-8259-22-23-0.0623216043662485-0.319130838712456	chr10	20951767	20952645	+	0	NA	Intergenic	Intergenic	-63579	NM_001042593	56422	Mm.25527	NM_019702	ENSMUSG00000019977	Hbs1l	2810035F15Rik|AI326327|eRFS	Hbs1-like (S. cerevisiae)	protein-coding
common_peak2-19726-91-84-0.664041009464636-2.90385667211376	chr1	72243764	72244413	+	0	NA	intron (NM_001005423, intron 1 of 4)	intron (NM_001005423, intron 1 of 4)	14793	NM_001005423	381269	Mm.422636	NM_001005423	ENSMUSG00000039395	Mreg	Gm974|Wdt2|dsu	melanoregulin	protein-coding
common_peak1-10951-27-56--0.841344063269506-1.7405232834637	chr15	25622539	25623503	+	0	NA	intron (NM_019472, intron 2 of 40)	B1_Mur2|SINE|Alu	70716	NM_019472	17909	Mm.60590	NM_019472	ENSMUSG00000022272	Myo10	AW048724|D15Ertd600e|mKIAA0799	myosin X	protein-coding
common_peak2-21571-14-13-0.0918612383000403-0.332077462497413	chr11	97629182	97629720	+	0	NA	Intergenic	Intergenic	-1524	NM_026186	67480	Mm.33206	NM_026186	ENSMUSG00000018541	Cwc25	1300013D05Rik|AA473636|Ccdc49|R75228	CWC25 spliceosome-associated protein homolog (S. cerevisiae)	protein-coding
unique_peak1-1696-9-6-0.382258484346616-1.11707584880836	chr13	80936119	80936591	+	0	NA	Intergenic	Intergenic	-86328	NM_001042591	105171	Mm.423137	NM_001042591	ENSMUSG00000074794	Arrdc3	AI450344|mKIAA1376	arrestin domain containing 3	protein-coding
common_peak1-8743-13-12-0.0780323124966764-0.334470287753051	chr11	4160342	4161058	+	0	NA	intron (NM_008501, intron 1 of 3)	intron (NM_008501, intron 1 of 3)	3129	NM_008501	16878	Mm.4964	NM_008501	ENSMUSG00000034394	Lif	-	leukemia inhibitory factor	protein-coding
common_peak2-26765-11-6-0.701338662194009-1.32595962126035	chr2	140847417	140847863	+	0	NA	intron (NM_001013802, intron 4 of 18)	L1Md_F2|LINE|L1	-350428	NM_178382	71436	Mm.426781	NM_178382	ENSMUSG00000051379	Flrt3	5530600M07Rik|C430047I10Rik|mKIAA1469	fibronectin leucine rich transmembrane protein 3	protein-coding
common_peak1-8582-25-19-0.539921810457743-0.756750750680359	chr10	99240891	99242110	+	0	NA	Intergenic	Intergenic	-19208	NM_027945	71832	Mm.483162	NM_027945	ENSMUSG00000046934	Csl	1700007H16Rik	citrate synthase like	protein-coding
common_peak1-12988-23-17-0.551842503066768-0.713114929964887	chr19	4200929	4201791	+	0	NA	exon (NM_011237, exon 2 of 11)	exon (NM_011237, exon 2 of 11)	243	NM_011237	19367	Mm.277629	NM_011237	ENSMUSG00000024824	Rad9a	Rad9	RAD9 homolog A	protein-coding
common_peak1-12138-11-8-0.338768582809301-1.14218153353838	chr17	27562248	27562719	+	0	NA	TTS (NM_001291045)	TTS (NM_001291045)	67441	NR_106077	102466228		NR_106077		Mir7218	mmu-mir-7218	microRNA mir-7218	ncRNA
unique_peak2-36173-7-11--0.785871670422967-1.21681515183528	chr2	28938225	28938967	+	0	NA	intron (NM_009442, intron 9 of 11)	intron (NM_009442, intron 9 of 11)	22813	NM_009442	22130	Mm.252195	NM_009442	ENSMUSG00000026803	Ttf1	AV245725|TTF-1|TTF-I	transcription termination factor, RNA polymerase I	protein-coding
common_peak1-16108-25-20-0.469532482566345-0.662033714151238	chr5	65457340	65458292	+	0	NA	Intergenic	Intergenic	-64654	NM_175174	71778	Mm.10281	NM_175174	ENSMUSG00000054920	Klhl5	1300013C10Rik	kelch-like 5	protein-coding
unique_peak1-3771-12-1-2.64877598508764-3.36932189928148	chr19	55439588	55440016	+	0	NA	intron (NM_016862, intron 3 of 7)	intron (NM_016862, intron 3 of 7)	49255	NM_001293686	53611	Mm.258637	NM_016862	ENSMUSG00000024983	Vti1a	1110014F16Rik|1110018K19Rik|4921537J05Rik|MVti1|MVti1a|Vti1|Vti1-rp2	vesicle transport through interaction with t-SNAREs 1A	protein-coding
unique_peak2-36058-11-11--0.0762689164695427-0.301029995663976	chr19	47855137	47855732	+	0	NA	intron (NM_027559, intron 16 of 37)	MTD|LTR|MaLR	49188	NM_026377	67788	Mm.181610	NM_026377	ENSMUSG00000025066	Sfr1	6330577E15Rik|Meir5	SWI5 dependent recombination repair 1	protein-coding
common_peak2-20437-10-8-0.186490343566457-1.078512453669	chr10	34096063	34096512	+	0	NA	intron (NM_176968, intron 6 of 11)	intron (NM_176968, intron 6 of 11)	-13500	NM_009925	12813	Mm.443177	NM_009925	ENSMUSG00000039462	Col10a1	Col10|Col10a-1	collagen, type X, alpha 1	protein-coding
unique_peak1-7309-14-3-1.89921616035764-2.80787975886178	chr9	117714697	117715180	+	0	NA	Intergenic	Intergenic	-175907	NM_001172121	207181	Mm.326411	NM_178660	ENSMUSG00000039607	Rbms3	6720477E09Rik|8430436O14Rik	RNA binding motif, single stranded interacting protein	protein-coding
common_peak1-16361-11-12--0.191746133889479-0.310474156842889	chr5	122371281	122371897	+	0	NA	intron (NM_007804, intron 3 of 22)	intron (NM_007804, intron 3 of 22)	72552	NM_175474	231717	Mm.12654	NM_175474	ENSMUSG00000044134	Fam109a	A230106M15Rik|AU017694|IPIP27A|Ses1	family with sequence similarity 109, member A	protein-coding
unique_peak1-1064-21-3-2.56948926526624-4.33845181153635	chr11	81913107	81913999	+	0	NA	Intergenic	L1MB2|LINE|L1	-1794	NM_011331	20293	Mm.867	NM_011331	ENSMUSG00000035352	Ccl12	MCP-5|Scya12	chemokine (C-C motif) ligand 12	protein-coding
common_peak2-30528-7-8--0.370834171144123-1.00793137938329	chr7	66585690	66586048	+	0	NA	Intergenic	L1M2|LINE|L1	-6350	NR_015479	330544	Mm.9002	NR_015479		C230091D08Rik	-	RIKEN cDNA C230091D08 gene	ncRNA
unique_peak1-4807-12-2-2.06381348436648-2.79529063155376	chr3	137753142	137753785	+	0	NA	3' UTR (NM_008642, exon 18 of 18)	3' UTR (NM_008642, exon 18 of 18)	-23111	NR_037975	329763	Mm.169710	NM_177860	ENSMUSG00000049349	Gm5105	D830013H12|EG329763	predicted gene 5105	ncRNA
unique_peak1-1113-10-3-1.35641534500877-1.75805390616669	chr11	94340638	94341192	+	0	NA	intron (NM_144827, intron 14 of 15)	intron (NM_144827, intron 14 of 15)	-5403	NM_001112813	12291	Mm.29585	NM_009783	ENSMUSG00000020866	Cacna1g	Cav3.1d|[a]1G|a1G|alpha-1G|mKIAA1123	calcium channel, voltage-dependent, T type, alpha 1G subunit	protein-coding
unique_peak1-6048-8-1-2.00522241794757-2.05605744720049	chr6	115432702	115433171	+	0	NA	intron (NM_001127330, intron 7 of 7)	B3A|SINE|B2	60852	NM_011146	19016	Mm.3020	NM_011146	ENSMUSG00000000440	Pparg	Nr1c3|PPAR-gamma|PPAR-gamma2|PPARgamma|PPARgamma2	peroxisome proliferator activated receptor gamma	protein-coding
common_peak2-23320-6-5--0.0195643903408542-0.947717972411649	chr15	36878262	36878688	+	0	NA	Intergenic	Intergenic	58682	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
common_peak2-26815-20-21-0.0286431659538957-0.306080386793804	chr2	151530576	151531550	+	0	NA	intron (NM_001160363, intron 1 of 1)	intron (NM_001160363, intron 1 of 1)	3319	NM_001160363	108832	Mm.103494	NM_001160363	ENSMUSG00000044364	Tmem74b	5430405G05Rik	transmembrane protein 74B	protein-coding
unique_peak1-3675-9-2-1.60465090568306-1.87199725847353	chr19	41836130	41836645	+	0	NA	Intergenic	Intergenic	14936	NR_040320	100502871	Mm.394485	NR_040320		Gm19424	-	predicted gene, 19424	ncRNA
common_peak2-27507-31-48--0.389471173302085-0.611014125894502	chr3	95217248	95218145	+	0	NA	Intergenic	RMER19B|LTR|ERVK	-10933	NR_015490	67654	Mm.75066	NR_015490		4930558C23Rik	-	RIKEN cDNA 4930558C23 gene	ncRNA
common_peak1-7679-49-46-0.451694971347546-0.943512743618327	chr1	78488371	78489637	+	0	NA	Intergenic	Intergenic	-3532	NR_102757	23874	Mm.28922	NM_011811	ENSMUSG00000026245	Farsb	C76708|Farsa|Farsl|Farslb|Frsb	phenylalanyl-tRNA synthetase, beta subunit	protein-coding
common_peak2-26120-64-52-0.737525947145405-2.33395341189245	chr2	6212182	6213840	+	0	NA	intron (NR_040333, intron 4 of 6)	intron (NR_040333, intron 4 of 6)	-30792	NM_001080548	98910	Mm.40673	NM_181399	ENSMUSG00000039046	Usp6nl	AI316785|RNTRE|TRE2NL|mKIAA0019	USP6 N-terminal like	protein-coding
unique_peak2-35915-7-10--0.660340788339108-1.12966497611638	chr19	5796292	5796872	+	0	NA	non-coding (NR_002847, exon 1 of 1)	non-coding (NR_002847, exon 1 of 1)	6089	NR_002847	72289	Mm.298256	NR_002847	ENSMUSG00000092341	Malat1	2210401K01Rik|9430072K23Rik|AI647968|Neat2	metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)	ncRNA
common_peak2-28596-18-26--0.441968350935117-0.471456499375593	chr5	21185884	21186617	+	0	NA	intron (NM_178728, intron 2 of 4)	intron (NM_178728, intron 2 of 4)	20913	NM_178728	242864	Mm.153292	NM_178728	ENSMUSG00000044968	Napepld	A530089G06|Mbldc1|NAPE-PLD	N-acyl phosphatidylethanolamine phospholipase D	protein-coding
common_peak1-16857-18-4-1.99099105634099-2.82951996911245	chr6	54369995	54370899	+	0	NA	intron (NR_033635, intron 1 of 13)	ORR1D2-int|LTR|MaLR	9768	NR_033635	100042056	Mm.448157	NM_198118	ENSMUSG00000073067	9130019P16Rik	6430501H15Rik|OTTMUSG00000023151	RIKEN cDNA 9130019P16 gene	ncRNA
unique_peak1-4326-10-0-3.35641534500877-3.31132995230379	chr2	151605505	151606097	+	0	NA	Intergenic	MLT1B|LTR|MaLR	-38772	NM_212446	228769	Mm.146984	NM_144889	ENSMUSG00000032869	Psmf1	AW048666|BC012260|PI31	proteasome (prosome, macropain) inhibitor subunit 1	protein-coding
unique_peak1-3799-7-6--0.00826409175941478-0.97990265578305	chr19	59338568	59339090	+	0	NA	intron (NM_172523, intron 3 of 15)	intron (NM_172523, intron 3 of 15)	3461	NM_172523	214084	Mm.268797	NM_172523	ENSMUSG00000025094	Slc18a2	1110037L13Rik|9330105E13|Vmat2	solute carrier family 18 (vesicular monoamine), member 2	protein-coding
unique_peak2-39572-5-5--0.289342836727009-0.909929411522249	chr9	73068773	73069207	+	0	NA	Intergenic	Intergenic	107714	NM_198609	225215	Mm.379366	NM_198609	ENSMUSG00000032215	Rsl24d1	2410159K22Rik	ribosomal L24 domain containing 1	protein-coding
common_peak1-17869-38-14-1.66456206369001-4.5819768714626	chr7	114203800	114205149	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-12870	NM_147033	259035	Mm.377800	NM_147033	ENSMUSG00000049674	Olfr714	MOR263-2|P4	olfactory receptor 714	protein-coding
common_peak2-23806-14-7-0.899216160357645-0.947446088118041	chr15	100422298	100422892	+	0	NA	Intergenic	Intergenic	-5799	NM_010127	19009	Mm.28825	NM_010127	ENSMUSG00000009739	Pou6f1	2310038G18Rik|Brn5.0|C79593|Emb|cns-1	POU domain, class 6, transcription factor 1	protein-coding
unique_peak1-4783-12-6-0.841421063030034-1.58711810488664	chr3	130691004	130691720	+	0	NA	Intergenic	Intergenic	-121853	NM_010703	16842	Mm.255219	NM_010703	ENSMUSG00000027985	Lef1	3000002B05|AI451430|Lef-1	lymphoid enhancer binding factor 1	protein-coding
unique_peak2-35473-4-7--1.02346051385325-1.09384600808989	chr17	44458747	44459187	+	0	NA	Intergenic	Intergenic	133446	NM_172621	224796	Mm.37666	NM_172621	ENSMUSG00000023959	Clic5	5730531E12Rik|B330005L24|Gm322|jbg	chloride intracellular channel 5	protein-coding
common_peak2-19978-39-24-0.971905057144429-2.19832861281706	chr1	133417888	133418894	+	0	NA	intron (NM_001081011, intron 2 of 22)	MIRb|SINE|MIR	5547	NM_001081011	14270	Mm.276259	NM_019520	ENSMUSG00000026425	Srgap2	9930124L22Rik|AI448945|FBP2|Fnbp2|srGAP3	SLIT-ROBO Rho GTPase activating protein 2	protein-coding
unique_peak1-6142-7-5-0.214128329577033-1.01466476204226	chr6	135043278	135043782	+	0	NA	Intergenic	Intergenic	24771	NM_053118	93746	Mm.49902	NM_053118	ENSMUSG00000030205	Gprc5d	-	G protein-coupled receptor, family C, group 5, member D	protein-coding
common_peak2-21163-19-12-0.702247608520594-0.840839978588874	chr11	58866994	58867554	+	0	NA	exon (NM_199152, exon 52 of 90)	exon (NM_199152, exon 52 of 90)	75679	NM_053168	94091	Mm.248049	NM_053168	ENSMUSG00000020455	Trim11	-	tripartite motif-containing 11	protein-coding
common_peak2-29736-8-8--0.164702583494742-1.00793137938329	chr6	85915070	85915612	+	0	NA	Intergenic	Intergenic	-3680	NM_028099	72102	Mm.24007	NM_028099	ENSMUSG00000030002	Dusp11	2010300F21Rik|AI481497	dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	protein-coding
common_peak2-21644-95-149--0.0809033454718664-0.337597834806264	chr11	101657660	101658507	+	0	NA	Intergenic	Intergenic	-11459	NM_008815	18612	Mm.5025	NM_008815	ENSMUSG00000017724	Etv4	AW414408|Pea-3|Pea3	ets variant 4	protein-coding
unique_peak1-5616-9-2-1.60465090568306-1.87199725847353	chr6	125386345	125387017	+	0	NA	Intergenic	(TCCC)n|Simple_repeat|Simple_repeat	-56159	NM_198604	213522	Mm.333396	NM_198604	ENSMUSG00000038167	Plekhg6	BC026778|Gm155	pleckstrin homology domain containing, family G (with RhoGef domain) member 6	protein-coding
unique_peak2-33469-6-14--1.34149248522822-1.01572999746118	chr11	69098919	69099441	+	0	NA	Intergenic	Lx3_Mus|LINE|L1	38195	NM_172560	216846	Mm.28774	NM_172560	ENSMUSG00000032782	Cntrob	9830165K03Rik|Lip8	centrobin, centrosomal BRCA2 interacting protein	protein-coding
common_peak2-24155-17-16-0.130833496954699-0.356936432242225	chr16	42874544	42875240	+	0	NA	intron (NR_040522, intron 1 of 1)	intron (NR_040522, intron 1 of 1)	808	NR_040521	75722	Mm.243747	NR_040521	ENSMUSG00000075070	4932412D23Rik	ENSMUSG00000075070|Gm10809	RIKEN cDNA 4932412D23 gene	ncRNA
unique_peak1-783-22-2-3.06232160436625-5.33257845442771	chr11	20856040	20856977	+	0	NA	Intergenic	(CAGAGA)n|Simple_repeat|Simple_repeat	-125397	NM_173752	216551	Mm.76694	NM_173752	ENSMUSG00000042363	Lgalsl	1110067D22Rik|A530071M23|Grpa|Hspc159|Lgalsla	lectin, galactoside binding-like	protein-coding
common_peak1-12663-35-18-1.18344274501892-2.59278847729176	chr18	36524897	36526606	+	0	NA	intron (NM_001081365, intron 1 of 2)	intron (NM_001081365, intron 1 of 2)	17473	NM_001081365	66060	Mm.272527	NM_001081365		Cystm1	0610010O12Rik	cysteine-rich transmembrane module containing 1	protein-coding
common_peak1-10255-74-145--0.47393798190141-1.69676347006478	chr13	55211492	55213402	+	0	NA	intron (NM_012017, intron 1 of 6)	intron (NM_012017, intron 1 of 6)	5777	NM_012017	26919	Mm.22795	NM_012017	ENSMUSG00000021481	Zfp346	Jaz|Znf346	zinc finger protein 346	protein-coding
common_peak1-11723-24-30--0.160986407619158-0.316008636696545	chr16	32858202	32859304	+	0	NA	intron (NM_001200038, intron 1 of 19)	intron (NM_001200038, intron 1 of 19)	9699	NM_001200038	100502698	Mm.327319	NM_172615	ENSMUSG00000035629	1700021K19Rik	5330403K09|Kiaa0226|Rubicon|mKIAA0226	RIKEN cDNA 1700021K19 gene	protein-coding
unique_peak1-1299-16-0-4.11826364226806-5.41853992195166	chr11	120164214	120165073	+	0	NA	Intergenic	Intergenic	44084	NR_105900	102465564		NR_105900		Mir6935	mmu-mir-6935	microRNA mir-6935	ncRNA
common_peak2-27617-14-6-1.09186123830004-1.16633110333236	chr3	104674325	104674789	+	0	NA	intron (NR_045578, intron 3 of 13)	B1_Mur1|SINE|Alu	7133	NM_153091	229681	Mm.206379	NM_153091		St7l	St7r	suppression of tumorigenicity 7-like	protein-coding
unique_peak1-516-9-0-3.18961340640422-3.01029995663981	chr1	183866347	183866885	+	0	NA	intron (NM_010135, intron 3 of 14)	intron (NM_010135, intron 3 of 14)	83495	NM_008680	13800	Mm.87759	NM_008680	ENSMUSG00000022995	Enah	Mena|NDPP-1|Ndpp1|WBP8	enabled homolog (Drosophila)	protein-coding
unique_peak2-39833-2-7--1.91745425626332-1.45399745587252	chrX	48467141	48467504	+	0	NA	3' UTR (NM_134163, exon 8 of 8)	3' UTR (NM_134163, exon 8 of 8)	91687	NM_134163	171170	Mm.295324	NM_134163		Mbnl3	A530038J18Rik|AI661274|CHCR|E430034C16Rik|MBLX|MBLX39|MBXL	muscleblind-like 3 (Drosophila)	protein-coding
unique_peak1-402-16-9-0.796335547380699-0.844317084070804	chr1	155809905	155810698	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	63242	NM_008131	14645	Mm.210745	NM_008131	ENSMUSG00000026473	Glul	GS|Glns	glutamate-ammonia ligase (glutamine synthetase)	protein-coding
common_peak1-13958-13-21--0.680959587999529-0.607095980551316	chr2	91711177	91711714	+	0	NA	intron (NM_172669, intron 11 of 17)	intron (NM_172669, intron 11 of 17)	-50901	NM_007699	12672	Mm.330405	NM_007699	ENSMUSG00000040495	Chrm4	Chrm-4|M4	cholinergic receptor, muscarinic 4	protein-coding
unique_peak2-36584-5-7--0.704380336005853-1.01466476204226	chr2	175435153	175435630	+	0	NA	Intergenic	RLTR45-int|LTR|ERVK	-30595	NR_040256	626877	Mm.490744	NR_040256		Gm14405	OTTMUSG00000016573	predicted gene 14405	pseudo
unique_peak1-2579-6-3-0.565398110380302-1.08602067057793	chr16	30056783	30057266	+	0	NA	Intergenic	Intergenic	-8419	NM_008235	15205	Mm.390859	NM_008235	ENSMUSG00000022528	Hes1	Hry|bHLHb39	hairy and enhancer of split 1 (Drosophila)	protein-coding
common_peak2-28079-56-103--0.464843892701849-1.26143771187977	chr4	82503816	82507168	+	0	NA	promoter-TSS (NM_026647)	promoter-TSS (NM_026647)	73	NM_026647	68268	Mm.32047	NM_026647	ENSMUSG00000028403	Zdhhc21	9130404H11Rik|AL024349|D130004H04Rik|dep	zinc finger, DHHC domain containing 21	protein-coding
common_peak1-16682-38-72--0.618371899581487-1.3503990867063	chr6	8509175	8510582	+	0	NA	intron (NM_133236, intron 3 of 7)	B3|SINE|B2	39820	NM_001286729	170772	Mm.210787	NM_133236	ENSMUSG00000029638	Glcci1	2310047L21Rik|A130036A18Rik|Fam117c|Gig18|Tssn1	glucocorticoid induced transcript 1	protein-coding
common_peak2-22477-9-8-0.0196884049619079-1.03275496310833	chr13	48625828	48626229	+	0	NA	Intergenic	RMER19B|LTR|ERVK	5455	NR_029656	387247		NR_029656	miRBase:MI0000405	Mirlet7d	Mirnlet7d|mmu-let-7d	microRNA let7d	ncRNA
common_peak2-30067-10-9-0.0344872501214071-1.05503135781948	chr6	129180718	129181187	+	0	NA	Intergenic	RMER17C|LTR|ERVK	7111	NR_040265	76432	Mm.261738	NR_040265	ENSMUSG00000097354	2310001H17Rik	AI646108	RIKEN cDNA 2310001H17 gene	ncRNA
common_peak2-23775-43-96--0.817349656663425-2.74902659363851	chr15	98985046	98986348	+	0	NA	intron (NM_139140, intron 2 of 12)	RLTR45-int|LTR|ERVK	28421	NM_139140	72572	Mm.276650	NM_139140	ENSMUSG00000051934	Spats2	2700012F11Rik|59kDa|Scr59|p59	spermatogenesis associated, serine-rich 2	protein-coding
unique_peak1-406-11-3-1.50869358425161-1.95434855131066	chr1	156987466	156988133	+	0	NA	intron (NM_008209, intron 1 of 5)	intron (NM_008209, intron 1 of 5)	6111	NM_008209	15064	Mm.7580	NM_008209	ENSMUSG00000026471	Mr1	H2ls	major histocompatibility complex, class I-related	protein-coding
unique_peak1-4316-10-1-2.35641534500877-2.57096726280955	chr2	150780934	150781459	+	0	NA	intron (NM_207204, intron 14 of 23)	intron (NM_207204, intron 14 of 23)	45866	NM_001163476	69270	Mm.271603	NM_027014	ENSMUSG00000027454	Gins1	2810418N01Rik|Gins4|PSF1|mKIAA0186	GINS complex subunit 1 (Psf1 homolog)	protein-coding
unique_peak2-38000-11-13--0.298661337805991-0.337263207250336	chr6	29215630	29216440	+	0	NA	Intergenic	ID_B1|SINE|B4	-6453	NM_001190461	69573	Mm.45161	NM_023516	ENSMUSG00000043421	Hilpda	2310016C08Rik|AW049004|Hig2	hypoxia inducible lipid droplet associated	protein-coding
common_peak1-10792-59-73-0.115910635243628-0.370598165309234	chr14	76504583	76506651	+	0	NA	intron (NM_026177, intron 3 of 7)	intron (NM_026177, intron 3 of 7)	5005	NM_026177	67467	Mm.260767	NM_026177	ENSMUSG00000022008	Gpalpp1	1200011I18Rik|Kiaa1704	GPALPP motifs containing 1	protein-coding
common_peak2-21458-12-13--0.158578936969966-0.301029995663979	chr11	86992854	86993371	+	0	NA	intron (NM_197987, intron 13 of 23)	B2_Mm1t|SINE|B2	52535	NM_197987	68729	Mm.17436	NM_197987	ENSMUSG00000018548	Trim37	1110032A10Rik|2810004E07Rik|AI848587|AU043018|MUL|TEF3|mKIAA0898	tripartite motif-containing 37	protein-coding
common_peak2-32404-44-37-0.57396532112495-1.23216191351736	chrX	150477948	150478598	+	0	NA	TTS (NM_001243016).2	TTS (NM_001243016).2	-9901	NM_001243016	625650	Mm.380194	NM_001243016	ENSMUSG00000096867	Gm10057	ENSMUSG00000058986	predicted gene 10057	protein-coding
unique_peak2-35814-3-20--2.80630051273804-3.35694334496952	chr18	62977799	62978504	+	0	NA	Intergenic	Intergenic	-62150	NR_037693	78449	Mm.262195	NR_037693	ENSMUSG00000041789	2700046A07Rik	A330042I05Rik	RIKEN cDNA 2700046A07 gene	ncRNA
unique_peak2-35370-0-6--3.64748585253182-1.56314192529759	chr17	27809272	27809678	+	0	NA	intron (NM_001286744, intron 1 of 9)	PB1D9|SINE|Alu	-12709	NM_178365	23969	Mm.4926	NM_011861	ENSMUSG00000040276	Pacsin1	A830061D09Rik|H74|mKIAA1379|syndapin	protein kinase C and casein kinase substrate in neurons 1	protein-coding
common_peak1-7945-53-48-0.52626316830072-1.27243322704912	chr1	153125735	153127595	+	0	NA	Intergenic	Intergenic	-64963	NM_001039512	117198	Mm.33764	NM_028582	ENSMUSG00000023150	Ivns1abp	1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850	influenza virus NS1A binding protein	protein-coding
unique_peak1-6905-7-0-2.79909083029819-2.40823996531185	chr8	104962366	104962849	+	0	NA	Intergenic	Intergenic	346404	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
common_peak1-11781-37-14-1.6191024758773-4.20640746933198	chr16	45892652	45894338	+	0	NA	Intergenic	Intergenic	-49004	NM_001252442	208177	Mm.211477	NM_153412	ENSMUSG00000033149	Phldb2	AV253284|C820004H04Rik|LL5b|LL5beta	pleckstrin homology-like domain, family B, member 2	protein-coding
unique_peak1-5156-11-2-1.92373108353046-2.32232533660526	chr5	24445884	24446507	+	0	NA	intron (NM_145401, intron 4 of 15)	intron (NM_145401, intron 4 of 15)	-31868	NM_001170556	108099	Mm.33649	NM_145401	ENSMUSG00000028944	Prkag2	2410051C13Rik|AAKG|AAKG2|AI854673|H91620p|WPWS	protein kinase, AMP-activated, gamma 2 non-catalytic subunit	protein-coding
unique_peak1-6367-8-2-1.42025991722641-1.65811743852845	chr7	66977986	66978513	+	0	NA	Intergenic	Intergenic	25942	NR_033779	64245		NR_033779		Snord116l2	Pwcr1l2	small nucleolar RNA, C/D box 116-like 2	snoRNA
common_peak1-9260-10-12--0.344024373132323-0.340565874754526	chr11	86962486	86962923	+	0	NA	intron (NM_197987, intron 7 of 23)	intron (NM_197987, intron 7 of 23)	22127	NM_197987	68729	Mm.17436	NM_197987	ENSMUSG00000018548	Trim37	1110032A10Rik|2810004E07Rik|AI848587|AU043018|MUL|TEF3|mKIAA0898	tripartite motif-containing 37	protein-coding
common_peak1-13895-35-25-0.730930540321412-1.34810744351377	chr2	77175851	77177113	+	0	NA	Intergenic	RLTR25A|LTR|ERVK	-57833	NM_175465	228071	Mm.27120	NM_175465	ENSMUSG00000042272	Sestd1	1500031J16Rik|A930010O20|Solo/Trio8	SEC14 and spectrin domains 1	protein-coding
common_peak2-27458-31-43--0.234192947824174-0.398838069828027	chr3	90525747	90527674	+	0	NA	Intergenic	Intergenic	-4118	NM_001165968	384997	Mm.316644	NM_207263	ENSMUSG00000042250	Pglyrp4	Gm1478|Gm413	peptidoglycan recognition protein 4	protein-coding
common_peak1-11599-13-12-0.0780323124966764-0.334470287753051	chr16	17508618	17509238	+	0	NA	promoter-TSS (NM_025808)	promoter-TSS (NM_025808)	-136	NM_025808	66863	Mm.161726	NM_025808	ENSMUSG00000022761	Lztr1	1200003E21Rik|AI591627|AW550890	leucine-zipper-like transcriptional regulator, 1	protein-coding
common_peak1-13012-30-13-1.36232048743427-2.74004546941311	chr19	5017455	5018639	+	0	NA	Intergenic	MLT1A1|LTR|MaLR	-5959	NM_007854	13340	Mm.4930	NM_007854	ENSMUSG00000024891	Slc29a2	Der12|Ent2|Hnp36	solute carrier family 29 (nucleoside transporters), member 2	protein-coding
common_peak2-29472-33-41--0.0609798602532319-0.303710893903464	chr6	30390366	30391030	+	0	NA	intron (NM_029742, intron 3 of 9)	intron (NM_029742, intron 3 of 9)	38789	NM_029742	76788	Mm.277308	NM_029742	ENSMUSG00000029775	Klhdc10	2410127E18Rik|AI593221|mKIAA0265	kelch domain containing 10	protein-coding
common_peak1-17350-52-74--0.120558700230181-0.339000539072378	chr7	4914714	4915868	+	0	NA	intron (NM_001146329, intron 1 of 3)	intron (NM_001146329, intron 1 of 3)	659	NM_001146329	381836	Mm.297829	NM_001146329	ENSMUSG00000030433	Sbk2	Gm1079|Sgk069	SH3-binding domain kinase family, member 2	protein-coding
unique_peak1-4434-8-3-1.00522241794757-1.39487600375387	chr2	168608477	168609011	+	0	NA	Intergenic	Intergenic	-16043	NM_175303	99377	Mm.434054	NM_175303	ENSMUSG00000027547	Sall4	5730441M18Rik|AA407717|AL022809|AW536104|C330011P20Rik|C78083|C78563|Tex20	sal-like 4 (Drosophila)	protein-coding
common_peak1-8716-68-48-0.955250935183088-3.71858791457821	chr11	99105652	99107821	+	0	NA	Intergenic	Intergenic	-1355	NM_172946	268481	Mm.133193	NM_172946	ENSMUSG00000035849	Krt222	6330509G02Rik	keratin 222	protein-coding
common_peak1-13508-15-27--0.795190171501948-0.918917574080418	chr2	92389226	92389864	+	0	NA	Intergenic	Intergenic	-42818	NR_106080	102466819		NR_106080	miRBase:MI0023716	Mir7221	mmu-mir-7221	microRNA mir-7221	ncRNA
unique_peak2-37776-3-9--1.73591118484664-1.57096726280955	chr5	116006333	116006729	+	0	NA	TTS (NM_011223)	TTS (NM_011223)	-2945	NM_007475	11837	Mm.5286	NM_007475	ENSMUSG00000067274	Rplp0	36B4|Arbp|L10E	ribosomal protein, large, P0	protein-coding
common_peak2-21576-12-17--0.521149016354673-0.417187467413082	chr11	97703471	97704007	+	0	NA	3' UTR (NM_001080935, exon 3 of 3)	3' UTR (NM_001080935, exon 3 of 3)	1645	NM_001080935	68127	Mm.110270	NM_001080935	ENSMUSG00000089676	B230217C12Rik	AI840637	RIKEN cDNA B230217C12 gene	protein-coding
common_peak1-8222-20-8-1.31814978314888-1.77631109801764	chr10	9602774	9603668	+	0	NA	intron (NM_001081344, intron 2 of 25)	intron (NM_001081344, intron 2 of 25)	17617	NM_001081344	78808	Mm.331751	NM_030191	ENSMUSG00000019790	Stxbp5	0710001E20Rik|4930565N16Rik|AW742610|LGL3|mKIAA1006	syntaxin binding protein 5 (tomosyn)	protein-coding
common_peak1-8796-21-10-1.11005764662894-1.59083646988122	chr11	19849018	19849929	+	0	NA	intron (NM_033523, intron 1 of 5)	RLTR11A|LTR|ERVK	25028	NM_033523	114716	Mm.266627	NM_033523	ENSMUSG00000045671	Spred2	C79158	sprouty-related, EVH1 domain containing 2	protein-coding
common_peak2-24362-8-6-0.197867495889966-1.03789460276074	chr17	6807344	6807731	+	0	NA	intron (NM_001166627, intron 1 of 4).3	intron (NM_001166627, intron 1 of 4).3	1041	NM_001166630	100040563	Mm.457381	NM_001166630		Dynlt1c	100040603|Dynlt1d	dynein light chain Tctex-type 1C	protein-coding
common_peak2-19939-20-13-0.680719862533589-0.809260849721102	chr1	128391915	128392593	+	0	NA	intron (NM_001081756, intron 3 of 16)	intron (NM_001081756, intron 3 of 16)	-2750	NM_172484	210356	Mm.377234	NM_172484	ENSMUSG00000049690	Nckap5	8430408F21|D130011D22Rik|E030049G20Rik|Erih1|Erih2|Gm1548|Nap5	NCK-associated protein 5	protein-coding
common_peak1-9275-11-22--1.0148683718054-1.11267835143409	chr11	87592449	87592958	+	0	NA	intron (NM_172449, intron 22 of 31)	intron (NM_172449, intron 22 of 31)	-14583	NM_010824	17523	Mm.4668	NM_010824	ENSMUSG00000009350	Mpo	mKIAA4033	myeloperoxidase	protein-coding
common_peak2-29975-18-33--0.774543690021988-1.00055860626307	chr6	120134657	120135670	+	0	NA	intron (NM_016718, intron 1 of 3)	B1F1|SINE|Alu	91765	NM_016718	29862	Mm.103668	NM_016718	ENSMUSG00000041377	Ninj2	-	ninjurin 2	protein-coding
unique_peak1-587-10-2-1.77145284428761-2.09384600808989	chr10	12035950	12036392	+	0	NA	Intergenic	Intergenic	545362	NM_011682	22288	Mm.331784	NM_011682	ENSMUSG00000019820	Utrn	AA589569|DRP|Dmdl	utrophin	protein-coding
common_peak1-19167-30-51--0.530764308649219-0.865433649227648	chr9	96363501	96364477	+	0	NA	Intergenic	Intergenic	15025	NM_011279	19823	Mm.28235	NM_011279	ENSMUSG00000051234	Rnf7	Rbx2|SAG	ring finger protein 7	protein-coding
common_peak1-18391-74-106--0.0255804094225391-0.302059133359974	chr8	71380966	71382998	+	0	NA	Intergenic	Intergenic	-22472	NM_008509	16956	Mm.1514	NM_008509	ENSMUSG00000015568	Lpl	-	lipoprotein lipase	protein-coding
unique_peak2-38726-1-7--2.62705701021674-1.80617997398389	chr7	112264621	112264956	+	0	NA	Intergenic	L1MEc|LINE|L1	-5185	NM_207557	404318	Mm.377938	NM_207557	ENSMUSG00000095248	Olfr681	MOR4014	olfactory receptor 681	protein-coding
common_peak1-15583-18-19--0.00900894365901106-0.306598483909153	chr4	129057988	129058847	+	0	NA	Intergenic	Intergenic	-3145	NM_028603	73680	Mm.32997	NM_028603	ENSMUSG00000028807	Zbtb8a	2410081M15Rik|AI480941	zinc finger and BTB domain containing 8a	protein-coding
unique_peak2-35511-0-7--3.84013093047421-1.80617997398389	chr17	47594085	47594663	+	0	NA	intron (NM_145489, intron 2 of 4)	B4|SINE|B4	-20050	NM_029296	75462	Mm.46129	NM_029296	ENSMUSG00000047150	1700001C19Rik	-	RIKEN cDNA 1700001C19 gene	protein-coding
common_peak1-18546-41-52--0.0267717497145386-0.301029995663982	chr8	95331108	95332908	+	0	NA	Intergenic	Intergenic	-19219	NM_008610	17390	Mm.29564	NM_008610	ENSMUSG00000031740	Mmp2	Clg4a|GelA|MMP-2	matrix metallopeptidase 2	protein-coding
unique_peak1-6078-10-0-3.35641534500877-3.31132995230379	chr6	120187556	120188179	+	0	NA	intron (NM_198884, intron 1 of 19)	intron (NM_198884, intron 1 of 19)	56710	NM_198884	330406	Mm.321840	NM_198884	ENSMUSG00000041372	B4galnt3	AB114826|B4GalNAcT3|C330047A21	beta-1,4-N-acetyl-galactosaminyl transferase 3	protein-coding
common_peak1-13376-53-31-1.14097301241593-3.80042730159129	chr19	46458682	46460399	+	0	NA	exon (NM_016860, exon 3 of 11)	exon (NM_016860, exon 3 of 11)	10685	NM_016860	54130	Mm.3118	NM_016860	ENSMUSG00000025228	Actr1a	Arp1|alpha-Arp1	ARP1 actin-related protein 1A, centractin alpha	protein-coding
common_peak2-29132-15-6-1.20480982849805-1.32521814697968	chr5	124497026	124497544	+	0	NA	Intergenic	Intergenic	-15016	NM_177876	330192	Mm.4079	NM_177876	ENSMUSG00000066278	Vps37b	2300007F24Rik|AI415429|BC026744	vacuolar protein sorting 37B (yeast)	protein-coding
common_peak2-27057-14-23--0.685746340363512-0.669502273696327	chr2	181241340	181242238	+	0	NA	intron (NR_111899, intron 3 of 5)	intron (NR_111899, intron 3 of 5)	9942	NM_001291204	66314	Mm.136648	NM_025482		Tpd52l2	2810411G23Rik|AU016537|C86069|D54	tumor protein D52-like 2	protein-coding
unique_peak1-1058-8-0-3.00522241794757-2.70926996097583	chr11	79877293	79877683	+	0	NA	intron (NM_001277106, intron 2 of 6)	intron (NM_001277106, intron 2 of 6)	17005	NM_001277106	54394	Mm.272093	NM_018776	ENSMUSG00000017561	Crlf3	BB164954|Creme9|Cytor4	cytokine receptor-like factor 3	protein-coding
common_peak1-7511-23-49--0.922088685265644-1.85759988472352	chr1	16664908	16665837	+	0	NA	intron (NM_026392, intron 2 of 2)	intron (NM_026392, intron 2 of 2)	10100	NM_026392	70397	Mm.194225	NM_026392	ENSMUSG00000025940	Tmem70	1110020A09Rik|2210416J16Rik	transmembrane protein 70	protein-coding
unique_peak1-809-11-2-1.92373108353046-2.32232533660526	chr11	4094876	4095418	+	0	NA	intron (NM_134023, intron 1 of 8)	intron (NM_134023, intron 1 of 8)	8311	NM_134023	103724	Mm.28140	NM_134023	ENSMUSG00000034412	Tbc1d10a	AI447804|EPI64|Tbc1d10|mFLJ00288	TBC1 domain family, member 10a	protein-coding
unique_peak1-6066-9-5-0.604650905683064-1.21398586181642	chr6	116652218	116652767	+	0	NA	intron (NM_178768, intron 1 of 4)	intron (NM_178768, intron 1 of 4)	14284	NM_178768	319776	Mm.133120	NM_178768	ENSMUSG00000048108	Tmem72	C230095G01Rik	transmembrane protein 72	protein-coding
common_peak2-32130-17-45--1.30526561785198-2.66231292118422	chr9	106170454	106171560	+	0	NA	Intergenic	Intergenic	-12385	NM_027354	70235	Mm.23054	NM_027354	ENSMUSG00000023345	Poc1a	2510040D07Rik|Wdr51a	POC1 centriolar protein homolog A (Chlamydomonas)	protein-coding
common_peak2-23531-8-8--0.164702583494742-1.00793137938329	chr15	77838912	77839272	+	0	NA	intron (NM_007583, intron 2 of 3)	intron (NM_007583, intron 2 of 3)	-37838	NM_018749	55944	Mm.3955	NM_018749	ENSMUSG00000016554	Eif3d	66/67kDa|AA407891|Eif3s7|eIF3p66	eukaryotic translation initiation factor 3, subunit D	protein-coding
unique_peak2-34987-4-8--1.19338551529556-1.21878474469819	chr15	99295332	99295824	+	0	NA	Intergenic	RSINE1|SINE|B4	-7399	NM_001001884	380969	Mm.22915	NM_001001884	ENSMUSG00000023009	Nckap5l	C230021P08Rik	NCK-associated protein 5-like	protein-coding
unique_peak2-33749-4-9--1.34538860874061-1.36011389749466	chr11	117098823	117099291	+	0	NA	intron (NM_001113486, intron 2 of 11)	intron (NM_001113486, intron 2 of 11)	-28503	NM_001113487	53860	Mm.38450	NM_017380	ENSMUSG00000059248	Sept9	MSF1|Msf|PNUTL4|Sint1	septin 9	protein-coding
common_peak1-17109-31-41--0.167078751965637-0.345592563585011	chr6	113689648	113690552	+	0	NA	intron (NM_024206, intron 1 of 8)	intron (NM_024206, intron 1 of 8)	575	NM_024206	110379	Mm.29296	NM_024206	ENSMUSG00000030298	Sec13	1110003H02Rik|Sec13l1|Sec13r	SEC13 homolog (S. cerevisiae)	protein-coding
common_peak2-32321-7-5-0.214128329577033-1.01466476204226	chrX	73465075	73465569	+	0	NA	Intergenic	L1Md_A|LINE|L1	-44323	NM_001013760	238829	Mm.292319	NM_001013760	ENSMUSG00000071738	Gm4937	EG238829	predicted gene 4937	protein-coding
unique_peak1-4981-11-0-3.50869358425161-3.61235994796777	chr4	109432822	109433363	+	0	NA	intron (NM_007983, intron 7 of 18)	intron (NM_007983, intron 7 of 18)	83860	NM_007983	14084	Mm.318259	NM_007983	ENSMUSG00000010517	Faf1	AA408698|Dffrx|Fam	Fas-associated factor 1	protein-coding
unique_peak2-32488-2-5--1.50241675698448-1.08602067057793	chr1	40285333	40285620	+	0	NA	intron (NM_008362, intron 1 of 10)	intron (NM_008362, intron 1 of 10)	3551	NM_008362	16177	Mm.896	NM_008362	ENSMUSG00000026072	Il1r1	CD121a|CD121b|IL-iR|Il1r-1	interleukin 1 receptor, type I	protein-coding
common_peak2-28945-12-11-0.0638134843664826-0.337263207250336	chr5	99252222	99252832	+	0	NA	Intergenic	Intergenic	-30931	NM_173404	110075	Mm.209571	NM_173404	ENSMUSG00000029335	Bmp3	9130206H07|9530029I04Rik	bone morphogenetic protein 3	protein-coding
unique_peak1-3381-13-5-1.19350952991661-1.95509489018123	chr19	3819197	3819833	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-32258	NM_001271496	12660	Mm.225505	NM_013490	ENSMUSG00000024843	Chka	CK|CK/EK-alpha|Chetk-alpha|Chk|ChoK|EK|EtnK-alpha	choline kinase alpha	protein-coding
common_peak2-23962-43-62--0.194716737976214-0.39202633512402	chr16	16302401	16303807	+	0	NA	promoter-TSS (NR_038046)	promoter-TSS (NR_038046)	46	NM_198246	70120	Mm.37486	NM_198246	ENSMUSG00000022792	Yars2	2210023C10Rik|tyrRS	tyrosyl-tRNA synthetase 2 (mitochondrial)	protein-coding
unique_peak2-32945-2-7--1.91745425626332-1.45399745587252	chr10	40510439	40510939	+	0	NA	intron (NM_177793, intron 4 of 4)	RMER20A|LTR|ERVK	92260	NM_027879	71713	Mm.46063	NM_027879	ENSMUSG00000038446	Cdc40	1200003H23Rik|EHB3|PRP17	cell division cycle 40	protein-coding
common_peak1-15799-33-15-1.33133756252553-2.86150037395324	chr5	39714420	39715593	+	0	NA	Intergenic	Intergenic	279807	NR_045416	75095	Mm.332354	NR_045416		4930513D17Rik	-	RIKEN cDNA 4930513D17 gene	ncRNA
unique_peak1-6761-9-3-1.18961340640422-1.57096726280955	chr8	56402448	56403009	+	0	NA	Intergenic	Intergenic	362647	NM_001253756	234267	Mm.241700	NM_153581	ENSMUSG00000031517	Gpm6a	Gpm6|M6A	glycoprotein m6a	protein-coding
common_peak1-16674-65-40-1.13461393485904-4.58651913475048	chr6	5442193	5443853	+	0	NA	intron (NM_013743, intron 2 of 10)	intron (NM_013743, intron 2 of 10)	3255	NM_013743	27273	Mm.235547	NM_013743	ENSMUSG00000019577	Pdk4	AV005916	pyruvate dehydrogenase kinase, isoenzyme 4	protein-coding
common_peak1-17535-9-15--0.81038659359578-0.630231561310125	chr7	28867536	28867992	+	0	NA	intron (NM_001122603, intron 3 of 19)	L1Md_F2|LINE|L1	11509	NM_001122603	215384	Mm.292276	NM_175444	ENSMUSG00000047730	Fcgbp	A430096B05Rik	Fc fragment of IgG binding protein	protein-coding
unique_peak1-2809-8-3-1.00522241794757-1.39487600375387	chr17	23996684	23997209	+	0	NA	TTS (NM_027220)	TTS (NM_027220)	6207	NM_027220	69814	Mm.244143	NM_027220	ENSMUSG00000048992	Prss32	2010001P08Rik|mT5|tryptase-5	protease, serine 32	protein-coding
common_peak2-20989-4-6--0.830815435910851-0.989110657569874	chr11	22799739	22800244	+	0	NA	exon (NM_144514, exon 3 of 3)	exon (NM_144514, exon 3 of 3)	-39655	NM_001169114	53625	Mm.395495	NM_016888	ENSMUSG00000051650	B3gnt2	AA408337|AA409404|AW260308|B3Galt6|B3gnt1|BGnT-1|BGnT-2|BGnT1|BGnT2|Beta3gnt	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2	protein-coding
unique_peak1-4202-7-0-2.79909083029819-2.40823996531185	chr2	118594167	118594552	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-4146	NM_001145644	53906	Mm.36777	NM_025308	ENSMUSG00000046804	Phgr1	1810007E14Rik|AA238765	proline/histidine/glycine-rich 1	protein-coding
common_peak1-11033-69-52-0.867221992695534-3.29877744900367	chr15	41446443	41448271	+	0	NA	intron (NM_001130166, intron 2 of 16)	intron (NM_001130166, intron 2 of 16)	-23818	NR_106195	102465902		NR_106195		Mir8115	mmu-mir-8115	microRNA mir-8115	ncRNA
unique_peak1-7091-13-3-1.77847203063777-2.58603100924543	chr9	35118412	35119067	+	0	NA	Intergenic	MTD|LTR|MaLR	30049	NR_040715	71133	Mm.158577	NR_040715		4933422A05Rik	-	RIKEN cDNA 4933422A05 gene	ncRNA
unique_peak2-37339-0-6--3.64748585253182-1.56314192529759	chr4	131843504	131843846	+	0	NA	intron (NM_025579, intron 3 of 5)	B2_Mm2|SINE|B2	13385	NM_025579	66464	Mm.331926	NM_025579		Taf12	20kDa|2810422D08Rik|AW557038|Taf2J	TAF12 RNA polymerase II, TATA box binding protein (TBP)-associated factor	protein-coding
common_peak1-10738-19-16-0.315224485411347-0.448200956659575	chr14	65889562	65890294	+	0	NA	intron (NM_015795, intron 2 of 7)	intron (NM_015795, intron 2 of 7)	4390	NM_015795	50759	Mm.65308	NM_015795	ENSMUSG00000034532	Fbxo16	4932435C24Rik|Fbx16	F-box protein 16	protein-coding
common_peak1-11177-16-19--0.203664452619301-0.325169893479371	chr15	76511246	76511974	+	0	NA	intron (NM_033371, intron 1 of 10)	intron (NM_033371, intron 1 of 10)	9500	NM_033371	73062	Mm.322901	NM_033371	ENSMUSG00000033819	Ppp1r16a	2900084E10Rik|Mypt3|R75527	protein phosphatase 1, regulatory (inhibitor) subunit 16A	protein-coding
common_peak2-23362-4-8--1.19338551529556-1.21878474469819	chr15	51852604	51853006	+	0	NA	Intergenic	B4A|SINE|B4	-18848	NM_175503	239435	Mm.24204	NM_175503	ENSMUSG00000068522	Aard	A5D3|AV328152	alanine and arginine rich domain containing protein	protein-coding
unique_peak2-34405-5-7--0.704380336005853-1.01466476204226	chr14	7952668	7952969	+	0	NA	intron (NM_001270812, intron 2 of 5).3	intron (NM_001270812, intron 2 of 5).3	-14847	NM_001024712	100042149	Mm.396155	NM_001024712	ENSMUSG00000092167	Gm3696	544988|ENSMUSG00000056940|Gm10014	predicted gene 3696	protein-coding
unique_peak2-38129-3-9--1.73591118484664-1.57096726280955	chr6	83317259	83317766	+	0	NA	3' UTR (NM_183138, exon 11 of 11)	3' UTR (NM_183138, exon 11 of 11)	18034	NM_175277	78653	Mm.391470	NM_175277		Bola3	1810056O20Rik	bolA-like 3 (E. coli)	protein-coding
common_peak2-30208-12-10-0.189344366450341-0.386243247519795	chr7	109559650	109560236	+	0	NA	intron (NM_009287, intron 5 of 11)	intron (NM_009287, intron 5 of 11)	-30266	NM_009103	20133	Mm.197486	NM_009103	ENSMUSG00000030978	Rrm1	RnrM1	ribonucleotide reductase M1	protein-coding
unique_peak1-2253-14-4-1.57728806547028-2.4322161449009	chr15	77718968	77719674	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	40103	NM_019913	56551	Mm.291917	NM_019913	ENSMUSG00000005354	Txn2	2510006J11Rik|AI788873|Trx2	thioredoxin 2	protein-coding
common_peak2-25931-27-23-0.40658345017408-0.622271369641148	chr19	46689575	46690367	+	0	NA	intron (NM_001177812, intron 2 of 4)	intron (NM_001177812, intron 2 of 4)	-7920	NM_001177813	226178	Mm.329895	NM_146099	ENSMUSG00000047731	Wbp1l	D19Wsu162e|Opal1	WW domain binding protein 1 like	protein-coding
unique_peak1-5256-9-0-3.18961340640422-3.01029995663981	chr5	54044887	54045433	+	0	NA	3' UTR (NM_001277116, exon 13 of 13)	3' UTR (NM_001277116, exon 13 of 13)	53783	NM_009827	12425	Mm.3521	NM_009827	ENSMUSG00000029193	Cckar	AW106902	cholecystokinin A receptor	protein-coding
common_peak2-27275-47-41-0.542524001987787-1.15813009484044	chr3	57344538	57345905	+	0	NA	intron (NM_133784, intron 2 of 6)	intron (NM_133784, intron 2 of 6)	34577	NM_133784	97064	Mm.405029	NM_133784	ENSMUSG00000027803	Wwtr1	2310058J06Rik|2610021I22Rik|C78399|Taz	WW domain containing transcription regulator 1	protein-coding
unique_peak1-3265-14-3-1.89921616035764-2.80787975886178	chr18	68057017	68057694	+	0	NA	Intergenic	Intergenic	-35556	NM_172631	52662	Mm.440183	NM_172631	ENSMUSG00000024544	Ldlrad4	8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik	low density lipoprotein receptor class A domain containing 4	protein-coding
unique_peak2-34870-6-9--0.75652998450706-1.11707584880836	chr15	77857592	77858281	+	0	NA	intron (NM_007583, intron 1 of 3)	intron (NM_007583, intron 1 of 3)	-56682	NM_018749	55944	Mm.3955	NM_018749	ENSMUSG00000016554	Eif3d	66/67kDa|AA407891|Eif3s7|eIF3p66	eukaryotic translation initiation factor 3, subunit D	protein-coding
unique_peak2-32619-0-5--3.42509343119537-1.32905871926422	chr1	116415495	116415850	+	0	NA	Intergenic	Intergenic	-1166042	NM_001077425	636808	Mm.101576	NM_001077425	ENSMUSG00000070695	Cntnap5a	Caspr5-1|EG636808	contactin associated protein-like 5A	protein-coding
unique_peak2-34395-9-6-0.382258484346616-1.11707584880836	chr14	55721811	55722202	+	0	NA	intron (NM_007455, intron 10 of 21)	intron (NM_007455, intron 10 of 21)	3424	NM_007455	11766	Mm.238879	NM_007455	ENSMUSG00000040701	Ap1g2	Adtg2|G2ad	adaptor protein complex AP-1, gamma 2 subunit	protein-coding
common_peak1-15307-8-7-0.00522241794757061-1.00793137938329	chr4	44012049	44012518	+	0	NA	Intergenic	Lx7|LINE|L1	-13232	NM_016760	12757	Mm.298875	NM_016760	ENSMUSG00000028478	Clta	AV026556|Lca	clathrin, light polypeptide (Lca)	protein-coding
common_peak2-25285-8-7-0.00522241794757061-1.00793137938329	chr18	69919225	69919628	+	0	NA	Intergenic	MTA_Mm-int|LTR|MaLR	-165787	NM_201362	381175	Mm.266831	NM_201362	ENSMUSG00000038903	Ccdc68	BC046343	coiled-coil domain containing 68	protein-coding
common_peak1-12326-67-112--0.275767479632193-0.683970344926767	chr17	48408667	48409780	+	0	NA	intron (NM_172623, intron 4 of 5)	intron (NM_172623, intron 4 of 5)	5562	NM_001163796	224840	Mm.131234	NM_172623	ENSMUSG00000051682	Treml4	5031403H21Rik|BB137214|IDCP1|TLT-4|TLT4|Treml3	triggering receptor expressed on myeloid cells-like 4	protein-coding
unique_peak2-32602-2-5--1.50241675698448-1.08602067057793	chr1	91540942	91541369	+	0	NA	intron (NM_001037136, intron 6 of 16)	intron (NM_001037136, intron 6 of 16)	39312	NR_015540	74403	Mm.444291	NR_015540		4933400F21Rik	1700091C04Rik|4930565K10Rik	RIKEN cDNA 4933400F21 gene	ncRNA
unique_peak1-778-15-7-1.01216475055566-1.08658567012551	chr10	130542215	130543052	+	0	NA	Intergenic	Intergenic	-608198	NM_001103366	625131	Mm.469844	NM_001103366	ENSMUSG00000091511	Vmn2r87	EG625131	vomeronasal 2, receptor 87	protein-coding
common_peak2-25771-33-33-0.24387472127519-0.447010559430123	chr19	32304444	32305163	+	0	NA	intron (NM_144792, intron 4 of 9)	intron (NM_144792, intron 4 of 9)	-19300	NM_001168526	208449	Mm.329810	NM_144792	ENSMUSG00000040451	Sgms1	9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23	sphingomyelin synthase 1	protein-coding
common_peak1-11421-20-8-1.31814978314888-1.77631109801764	chr15	99506274	99507083	+	0	NA	intron (NM_009597, intron 3 of 11)	intron (NM_009597, intron 3 of 11)	5529	NM_009597	11419	Mm.440107	NM_009597	ENSMUSG00000023017	Asic1	AI843610|ASIC|ASIC1a|Accn2|B530003N02Rik|BNaC2	acid-sensing (proton-gated) ion channel 1	protein-coding
common_peak1-8460-17-13-0.410941416147434-0.546772548767014	chr10	80033667	80034534	+	0	NA	intron (NM_078477, intron 1 of 1)	intron (NM_078477, intron 1 of 1)	5941	NM_078477	118445	Mm.41513	NM_078477	ENSMUSG00000035397	Klf16	AI843742|BTEB4|DRRF	Kruppel-like factor 16	protein-coding
unique_peak1-2411-11-5-0.923731083530457-1.477227296591	chr15	99531303	99531849	+	0	NA	TTS (NM_009597)	TTS (NM_009597)	-1142	NM_031842	83797	Mm.273756	NM_031842	ENSMUSG00000023018	Smarcd1	AA407987|Baf60a|D15Kz1	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	protein-coding
unique_peak1-1314-8-0-3.00522241794757-2.70926996097583	chr11	121056398	121056858	+	0	NA	intron (NM_025402, intron 6 of 8)	intron (NM_025402, intron 6 of 8)	-9119	NM_001001333	238023	Mm.275130	NM_001001333	ENSMUSG00000039307	Hexdc	BC069960	hexosaminidase (glycosyl hydrolase family 20, catalytic domain) containing	protein-coding
unique_peak2-39925-10-63--2.64358465499123-9.612105505917	chrX	104199625	104201784	+	0	NA	Intergenic	AT_rich|Low_complexity|Low_complexity	-83970	NM_172435	78826	Mm.74639	NM_172435	ENSMUSG00000050921	P2ry10	5830408N17Rik|Lypsr2|P2Y10	purinergic receptor P2Y, G-protein coupled 10	protein-coding
common_peak2-21794-3-8--1.58390809140159-1.39487600375387	chr11	118012869	118013261	+	0	NA	Intergenic	Intergenic	-22532	NM_001167746	69926	Mm.473893	NM_001167746	ENSMUSG00000033987	Dnah17	2810003K23Rik|Dnahc17|Dnahcl1|Gm1178|mKIAA3028	dynein, axonemal, heavy chain 17	protein-coding
common_peak1-9453-41-20-1.3088312820699-3.50002372270847	chr11	103141384	103143124	+	0	NA	Intergenic	MIRb|SINE|MIR	-13539	NM_016896	53859	Mm.158981	NM_016896	ENSMUSG00000020941	Map3k14	Nik|aly	mitogen-activated protein kinase kinase kinase 14	protein-coding
common_peak2-26866-11-9-0.186765489364251-0.344532117358383	chr2	155929638	155930041	+	0	NA	intron (NM_029397, intron 1 of 2)	B1F|SINE|Alu	7862	NM_170598	75710	Mm.27660	NM_029397		Rbm12	5730420G12Rik|9430070C08Rik|AI852903|SWAN|mKIAA0765	RNA binding motif protein 12	protein-coding
common_peak1-10186-23-43--0.737664114128217-1.21996307277154	chr13	42051813	42052820	+	0	NA	Intergenic	Lx8|LINE|L1	91032	NR_033545	100038577	Mm.387093	NR_033545		Gm10790	ENSMUSG00000074927	predicted gene 10790	ncRNA
common_peak1-10050-28-37--0.194968393622123-0.350690697593776	chr13	19395201	19396375	+	0	NA	Intergenic	MIR|SINE|MIR	91833	NM_024270	76205	Mm.41940	NM_024270	ENSMUSG00000003062	Stard3nl	0610035N01Rik|6530409L22Rik|AW124774|MENTHO	STARD3 N-terminal like	protein-coding
common_peak2-25506-8-8--0.164702583494742-1.00793137938329	chr19	5460418	5460820	+	0	NA	promoter-TSS (NM_021438)	promoter-TSS (NM_021438)	12	NM_021438	58249	Mm.329656	NM_021438	ENSMUSG00000024911	Fibp	2010004G08Rik|2010005N21Rik|3010027N18Rik	fibroblast growth factor (acidic) intracellular binding protein	protein-coding
unique_peak1-1606-19-8-1.23276232521937-1.61268301619756	chr13	37882861	37883619	+	0	NA	Intergenic	Intergenic	-34667	NM_026830	68750	Mm.491109	NM_026830	ENSMUSG00000039087	Rreb1	1110037N09Rik|AA414966|B930013M22Rik	ras responsive element binding protein 1	protein-coding
common_peak1-11791-14-15--0.100783839642355-0.301029995663982	chr16	52031365	52032071	+	0	NA	promoter-TSS (NM_001033238)	promoter-TSS (NM_001033238)	56	NM_001033238	208650	Mm.328206	NM_001033238	ENSMUSG00000022637	Cblb	AI429560|AI851073|Cbl-b	Casitas B-lineage lymphoma b	protein-coding
common_peak2-30702-18-13-0.505564229170747-0.625923329873571	chr7	112203182	112203888	+	0	NA	Intergenic	Lx9|LINE|L1	-1227	NM_146358	258355	Mm.377452	NM_146358	ENSMUSG00000073914	Olfr677	MOR32-11	olfactory receptor 677	protein-coding
unique_peak1-91-8-0-3.00522241794757-2.70926996097583	chr1	43719194	43719597	+	0	NA	Intergenic	MTD|LTR|MaLR	-68052	NM_024283	78896	Mm.50109	NM_024283	ENSMUSG00000026051	1500015O10Rik	Ecrg4	RIKEN cDNA 1500015O10 gene	protein-coding
common_peak1-16073-8-8--0.164702583494742-1.00793137938329	chr5	53564551	53565050	+	0	NA	intron (NM_172710, intron 7 of 23)	B1F1|SINE|Alu	39891	NM_172710	231238	Mm.235020	NM_172710	ENSMUSG00000029189	Sel1l3	2310045A20Rik|AI429585|mKIAA0746	sel-1 suppressor of lin-12-like 3 (C. elegans)	protein-coding
unique_peak2-37851-9-4-0.867685311516858-1.36011389749466	chr5	135794373	135794695	+	0	NA	intron (NM_033571, intron 8 of 8)	intron (NM_033571, intron 8 of 8)	31211	NM_001277892	94244	Mm.26037	NM_033571	ENSMUSG00000040013	Fkbp6	1700008G22Rik|36kDa|AU017274|D5Ertd724e|FKBP-36|FKBP-6	FK506 binding protein 6	protein-coding
common_peak1-9872-23-10-1.26233588587178-1.90052685918624	chr12	83527488	83528540	+	0	NA	intron (NM_172579, intron 14 of 20)	intron (NM_172579, intron 14 of 20)	115678	NM_172579	217692	Mm.261333	NM_172579	ENSMUSG00000042700	Sipa1l1	4931426N11Rik|AW213287|Spar|mKIAA0440	signal-induced proliferation-associated 1 like 1	protein-coding
unique_peak2-33800-4-6--0.830815435910851-0.989110657569874	chr11	120507055	120507409	+	0	NA	TTS (NM_001204820)	TTS (NM_001204820)	-2248	NM_144795	209027	Mm.127731	NM_144795	ENSMUSG00000025140	Pycr1	-	pyrroline-5-carboxylate reductase 1	protein-coding
unique_peak2-35066-8-7-0.00522241794757061-1.00793137938329	chr16	13504708	13505229	+	0	NA	Intergenic	MER58A|DNA|MER1_type	15544	NR_037997	70100	Mm.158330	NR_037997		2310015D24Rik	-	RIKEN cDNA 2310015D24 gene	ncRNA
common_peak1-10569-24-8-1.6232849013254-2.85636458546265	chr14	21547138	21548059	+	0	NA	intron (NM_010811, intron 5 of 14)	intron (NM_010811, intron 5 of 14)	6186	NM_010811	17423	Mm.4084	NM_010811	ENSMUSG00000039308	Ndst2	Mndns|NDST-2	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2	protein-coding
common_peak1-8317-19-17-0.232762325219374-0.392630012299441	chr10	42107221	42108100	+	0	NA	intron (NM_145743, intron 7 of 12)	intron (NM_145743, intron 7 of 12)	90711	NM_145743	215951	Mm.89646	NM_145743	ENSMUSG00000038302	Lace1	CG8520	lactation elevated 1	protein-coding
common_peak2-22694-32-26-0.524204517056192-0.869438253311882	chr13	98694669	98695569	+	0	NA	intron (NM_012026, intron 35 of 35)	RSINE1|SINE|B4	281001	NM_012026	110596	Mm.252718	NM_012026	ENSMUSG00000021662	Arhgef28	9230110L08Rik|AI323540|D13Bwg1089e|RIP2|Rgnef|RhoGEF|Rhoip2|p190RhoGEF	Rho guanine nucleotide exchange factor (GEF) 28	protein-coding
unique_peak2-39475-9-11--0.395349094316936-0.344532117358383	chr9	56937482	56938033	+	0	NA	intron (NM_001110350, intron 3 of 20)	intron (NM_001110350, intron 3 of 20)	13574	NM_011378	20466	Mm.15755	NM_011378	ENSMUSG00000042557	Sin3a	AW553200|Sin3|mKIAA4126|mSin3A	transcriptional regulator, SIN3A (yeast)	protein-coding
common_peak2-24911-24-39--0.528718192119646-0.694972475810969	chr17	84956458	84957635	+	0	NA	intron (NM_177606, intron 4 of 29)	intron (NM_177606, intron 4 of 29)	45811	NM_177606	213556	Mm.215159	NM_177606	ENSMUSG00000040852	Plekhh2	AI256725|E030001K05|mKIAA2028	pleckstrin homology domain containing, family H (with MyTH4 domain) member 2	protein-coding
common_peak1-8302-25-39--0.460078189542257-0.621525249893804	chr10	37136126	37137092	+	0	NA	Intergenic	Intergenic	-277877	NM_008538	17118	Mm.30059	NM_008538	ENSMUSG00000069662	Marcks	Macs|PKCSL	myristoylated alanine rich protein kinase C substrate	protein-coding
common_peak2-21449-24-29--0.113680692840802-0.304839791830752	chr11	86683240	86684379	+	0	NA	Intergenic	B3|SINE|B2	-62647	NM_026191	67487	Mm.260627	NM_026191	ENSMUSG00000018425	Dhx40	2410016C14Rik|ARG147|DDX40|PAD	DEAH (Asp-Glu-Ala-His) box polypeptide 40	protein-coding
common_peak2-25789-134-177-0.268836077813027-1.06246180126323	chr19	36128376	36130684	+	0	NA	intron (NM_008315, intron 1 of 2)	intron (NM_008315, intron 1 of 2)	2320	NM_008315	15566	Mm.254266	NM_008315	ENSMUSG00000024798	Htr7	5-HT7	5-hydroxytryptamine (serotonin) receptor 7	protein-coding
unique_peak1-5238-16-7-1.11826364226806-1.23399803405144	chr5	45493258	45494057	+	0	NA	Intergenic	Intergenic	136217	NR_073013	75783	Mm.218472	NR_073013		4930431F12Rik	-	RIKEN cDNA 4930431F12 gene	ncRNA
unique_peak2-37554-3-7--1.41398308995928-1.23214870625617	chr5	31635488	31635890	+	0	NA	intron (NR_105788, intron 7 of 7)	MuRRS-int|LTR|ERV1	35735	NM_144909	231103	Mm.100043	NM_144909	ENSMUSG00000059434	Gckr	GKRP	glucokinase regulatory protein	protein-coding
common_peak2-29360-9-8-0.0196884049619079-1.03275496310833	chr5	150707192	150707536	+	0	NA	Intergenic	Intergenic	57042	NR_045758	70969	Mm.78499	NR_045758		4930500F04Rik	4931407C17Rik	RIKEN cDNA 4930500F04 gene	ncRNA
unique_peak1-5504-10-3-1.35641534500877-1.75805390616669	chr5	136179752	136180297	+	0	NA	intron (NM_008898, intron 1 of 15)	B2_Mm2|SINE|B2	14940	NM_008898	18984	Mm.3863	NM_008898	ENSMUSG00000005514	Por	4933424M13Rik|CPR|CYPOR	P450 (cytochrome) oxidoreductase	protein-coding
unique_peak1-996-9-3-1.18961340640422-1.57096726280955	chr11	70468282	70468828	+	0	NA	promoter-TSS (NM_011072)	promoter-TSS (NM_011072)	-403	NM_011072	18643	Mm.2647	NM_011072	ENSMUSG00000018293	Pfn1	Pfn	profilin 1	protein-coding
common_peak1-17595-9-9--0.132314688483142-1.03275496310833	chr7	44524866	44525444	+	0	NA	Intergenic	Intergenic	1994749	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak1-6917-7-1-1.79909083029819-1.80617997398389	chr8	106281396	106281918	+	0	NA	Intergenic	L1Md_T|LINE|L1	153958	NR_045730	71058	Mm.67707	NR_045730		4933400L20Rik	-	RIKEN cDNA 4933400L20 gene	ncRNA
common_peak1-11023-11-17--0.661231417190699-0.58239619684445	chr15	38473413	38473934	+	0	NA	Intergenic	MIR|SINE|MIR	-24652	NM_018745	54375	Mm.250214	NM_018745	ENSMUSG00000037458	Azin1	1700085L02Rik|AI414949|Oazi|Oazin	antizyme inhibitor 1	protein-coding
unique_peak2-34516-6-16--1.52206473087004-1.32521814697968	chr14	52023192	52023754	+	0	NA	Intergenic	Intergenic	-7203	NM_011686	669149	Mm.377117	NM_011686	ENSMUSG00000000606	Vmn2r88	V2r13|V2r3	vomeronasal 2, receptor 88	protein-coding
common_peak1-9601-53-29-1.23408241680741-4.25291426018617	chr11	120236396	120238058	+	0	NA	intron (NM_027980, intron 3 of 9)	intron (NM_027980, intron 3 of 9)	2833	NM_027980	71885	Mm.274890	NM_027980	ENSMUSG00000025384	2310003H01Rik	Faap100	RIKEN cDNA 2310003H01 gene	protein-coding
common_peak1-10269-8-12--0.695217300193522-0.475924844171029	chr13	56021278	56021769	+	0	NA	Intergenic	Intergenic	-88737	NM_011097	18740	Mm.135195	NM_011097	ENSMUSG00000021506	Pitx1	Bft|P-OTX|Potx|Ptx1	paired-like homeodomain transcription factor 1	protein-coding
unique_peak1-3618-18-9-0.990991056340989-1.23014042908325	chr19	34582635	34583507	+	0	NA	intron (NM_021460, intron 5 of 9)	intron (NM_021460, intron 5 of 9)	18893	NM_001111100	16889	Mm.157545	NM_021460	ENSMUSG00000024781	Lipa	AA960673|Lal|Lip-1|Lip1	lysosomal acid lipase A	protein-coding
common_peak2-26611-13-20--0.613845392140992-0.532159081577619	chr2	116972034	116972699	+	0	NA	intron (NM_001277256, intron 1 of 4)	intron (NM_001277256, intron 1 of 4)	25559	NM_033524	114715	Mm.245890	NM_033524	ENSMUSG00000027351	Spred1	5730461F13Rik|AL024345|AW047647	sprouty protein with EVH-1 domain 1, related sequence	protein-coding
common_peak1-17944-60-85--0.0719728930815666-0.312733171082057	chr7	127477856	127479669	+	0	NA	exon (NM_177213, exon 4 of 31)	exon (NM_177213, exon 4 of 31)	6564	NM_177213	320631	Mm.78330	NM_177213	ENSMUSG00000054746	Abca15	4930500I12Rik	ATP-binding cassette, sub-family A (ABC1), member 15	protein-coding
common_peak1-7648-20-31--0.511925215408807-0.634510163964152	chr1	72306961	72307991	+	0	NA	intron (NM_023523, intron 7 of 7)	B3|SINE|B2	23412	NM_023523	111175	Mm.281738	NM_023523	ENSMUSG00000026189	Pecr	2400003B18Rik|TERP	peroxisomal trans-2-enoyl-CoA reductase	protein-coding
unique_peak1-2822-11-6-0.701338662194009-1.32595962126035	chr17	26596860	26597477	+	0	NA	Intergenic	Intergenic	45258	NM_001081656	240055	Mm.133211	NM_001081656	ENSMUSG00000034413	Neurl1b	C230078M08Rik|EG240055	neuralized homolog 1b (Drosophila)	protein-coding
common_peak1-18677-33-23-0.746375061804373-1.30960498844227	chr8	119423582	119424835	+	0	NA	intron (NM_026844, intron 2 of 3)	IAPEz-int|LTR|ERVK	21128	NM_026844	66531	Mm.4011	NM_026844	ENSMUSG00000014633	Cmc2	1110046L09Rik|2310061C15Rik|DC13	COX assembly mitochondrial protein 2	protein-coding
unique_peak2-34347-6-7--0.434601889619698-0.97990265578305	chr13	100124727	100125271	+	0	NA	intron (NM_173757, intron 2 of 10)	intron (NM_173757, intron 2 of 10)	10258	NM_173757	218506	Mm.30208	NM_173757	ENSMUSG00000041632	Mrps27	2610028H14Rik	mitochondrial ribosomal protein S27	protein-coding
common_peak1-14621-18-12-0.612479433087259-0.739965416525508	chr3	52641801	52642456	+	0	NA	Intergenic	Intergenic	89460	NR_040555	622124	Mm.389434	NR_040555		Gm20750	-	predicted gene, 20750	ncRNA
unique_peak2-34915-1-6--2.43441193227435-1.56314192529759	chr15	83481517	83481879	+	0	NA	intron (NM_001271473, intron 4 of 19)	intron (NM_001271473, intron 4 of 19)	-56111	NM_183017	223723	Mm.46778	NM_183017	ENSMUSG00000016757	Ttll12	BC055368|D430005B17	tubulin tyrosine ligase-like family, member 12	protein-coding
unique_peak2-39487-2-6--1.72480917832092-1.26211192963361	chr9	58373324	58373757	+	0	NA	3' UTR (NM_133983, exon 7 of 7)	3' UTR (NM_133983, exon 7 of 7)	15207	NM_133983	102657	Mm.5356	NM_133983	ENSMUSG00000035914	Cd276	6030411F23Rik|AU016588|B7RP-2|B7h3	CD276 antigen	protein-coding
common_peak2-21699-5-6--0.511735258063458-0.947717972411649	chr11	106612469	106612853	+	0	NA	exon (NM_001033435, exon 1 of 7)	exon (NM_001033435, exon 1 of 7)	121	NM_001033435	380732	Mm.343952	NM_001033435	ENSMUSG00000040528	Milr1	Allergin-1|Gm885|Mca32	mast cell immunoglobulin like receptor 1	protein-coding
common_peak1-19002-53-49-0.497116822641204-1.18183063007829	chr9	59691864	59693771	+	0	NA	intron (NM_173018, intron 16 of 43)	L1M4c|LINE|L1	93836	NM_173018	270163	Mm.249545	NM_173018	ENSMUSG00000039585	Myo9a	4732465J09Rik|C130068I12Rik|C230003M11	myosin IXa	protein-coding
common_peak2-32008-14-9-0.577288065470282-0.630231561310125	chr9	71805827	71806347	+	0	NA	intron (NM_001253862, intron 5 of 19)	intron (NM_001253862, intron 5 of 19)	-62184	NM_001253863	21406	Mm.171615	NM_011544	ENSMUSG00000032228	Tcf12	A130037E08Rik|ALF1|HEB|HEBAlt|HTF-4|HTF4|ME1|REB|bHLHb20	transcription factor 12	protein-coding
common_peak2-25471-86-64-0.953267981003899-4.77575201056461	chr19	4476679	4477781	+	0	NA	promoter-TSS (NM_134164)	promoter-TSS (NM_134164)	-87	NM_134164	171180	Mm.262270	NM_134164	ENSMUSG00000049303	Syt12	-	synaptotagmin XII	protein-coding
common_peak1-14735-11-12--0.191746133889479-0.310474156842889	chr3	86011162	86011655	+	0	NA	Intergenic	Intergenic	-17204	NM_001077688	80877	Mm.439825	NM_030695	ENSMUSG00000028080	Lrba	C80285|D3Ertd775e|Lab300|Lba	LPS-responsive beige-like anchor	protein-coding
common_peak2-32190-30-45--0.35388654656514-0.51862626278861	chr9	118040305	118041191	+	0	NA	intron (NM_026442, intron 1 of 3)	MMERVK10C-int|LTR|ERVK	18566	NM_026442	67899	Mm.9953	NM_026442	ENSMUSG00000039163	Cmc1	2010110K16Rik|2010312P05Rik|AI596001	COX assembly mitochondrial protein 1	protein-coding
common_peak1-17096-114-96-0.86404167952124-5.59912268764273	chr6	113037176	113039667	+	0	NA	intron (NM_028385, intron 1 of 21)	L1Md_F2|LINE|L1	10788	NM_028385	72895	Mm.367159	NM_028385	ENSMUSG00000034269	Setd5	2900045N06Rik|C330007C20|C85544|mKIAA1757	SET domain containing 5	protein-coding
common_peak1-17788-29-29-0.205399485006592-0.423354874519384	chr7	98329307	98330736	+	0	NA	intron (NM_011807, intron 1 of 22)	L1Md_F2|LINE|L1	90725	NM_011807	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
common_peak2-21100-42-44-0.250476231537509-0.522994948702178	chr11	51915356	51916700	+	0	NA	intron (NM_019411, intron 1 of 6)	intron (NM_019411, intron 1 of 6)	3702	NM_019411	19052	Mm.260288	NM_019411		Ppp2ca	PP2A|R75353	protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform	protein-coding
unique_peak1-6792-10-0-3.35641534500877-3.31132995230379	chr8	69871044	69871563	+	0	NA	Intergenic	RMER16-int|LTR|ERVK	-143354	NM_008673	17960	Mm.14125	NM_008673	ENSMUSG00000025588	Nat1	Nat-1	N-acetyl transferase 1	protein-coding
unique_peak2-36164-2-10--2.37688587490062-2.09384600808989	chr2	27413764	27414286	+	0	NA	Intergenic	MTEa-int|LTR|MaLR	43358	NM_080848	140858	Mm.28265	NM_080848	ENSMUSG00000026917	Wdr5	2410008O07Rik|AA408785|AA960360|Big|Big-3	WD repeat domain 5	protein-coding
unique_peak1-4131-23-6-1.91441258245148-3.22740510021752	chr2	91109707	91110567	+	0	NA	exon (NM_023854, exon 9 of 16)	exon (NM_023854, exon 9 of 16)	4865	NM_023854	77038	Mm.43636	NM_023854	ENSMUSG00000027255	Arfgap2	2310032E02Rik|Zfp289	ADP-ribosylation factor GTPase activating protein 2	protein-coding
unique_peak2-36504-3-6--1.22133801201688-1.08602067057793	chr2	157071228	157071659	+	0	NA	intron (NM_001039557, intron 8 of 24)	B2_Mm2|SINE|B2	-33391	NM_019642	20014	Mm.22130	NM_019642	ENSMUSG00000027642	Rpn2	1300012C06Rik|AV261018|Rpn-2	ribophorin II	protein-coding
common_peak2-31203-11-11--0.0762689164695427-0.301029995663976	chr8	61396088	61396618	+	0	NA	Intergenic	B3A|SINE|B2	5801	NM_173411	234290	Mm.39244	NM_173411	ENSMUSG00000049946	BC030500	-	cDNA sequence BC030500	protein-coding
common_peak2-24107-17-22--0.305265617851975-0.348739088570342	chr16	32677205	32678077	+	0	NA	intron (NM_001110147, intron 10 of 13)	intron (NM_001110147, intron 10 of 13)	4401	NM_001289443	51789	Mm.251115	NM_016788	ENSMUSG00000022791	Tnk2	Ack|Ack-1|Ack1|Cdgip|Pyk1	tyrosine kinase, non-receptor, 2	protein-coding
common_peak1-11817-33-50--0.341087779445966-0.542803625802499	chr16	70313704	70314795	+	0	NA	promoter-TSS (NM_028803)	promoter-TSS (NM_028803)	55	NM_028803	74185	Mm.396102	NM_028803	ENSMUSG00000022707	Gbe1	2310045H19Rik|2810426P10Rik|D16Ertd536e	glucan (1,4-alpha-), branching enzyme 1	protein-coding
unique_peak2-32562-5-7--0.704380336005853-1.01466476204226	chr1	78437195	78437607	+	0	NA	intron (NM_001278075, intron 16 of 17)	intron (NM_001278075, intron 16 of 17)	48071	NR_102758	23874	Mm.28922	NM_011811	ENSMUSG00000026245	Farsb	C76708|Farsa|Farsl|Farslb|Frsb	phenylalanyl-tRNA synthetase, beta subunit	protein-coding
common_peak2-25782-11-9-0.186765489364251-0.344532117358383	chr19	34208459	34208983	+	0	NA	intron (NM_024204, intron 2 of 5)	IAPEz-int|LTR|ERVK	31810	NM_024204	52024	Mm.183030	NM_024204	ENSMUSG00000024774	Ankrd22	5430429D21Rik|D19Ertd675e	ankyrin repeat domain 22	protein-coding
common_peak2-30094-6-8--0.60452689106201-1.03789460276074	chr6	135027109	135027544	+	0	NA	intron (NM_181444, intron 1 of 3)	Lx|LINE|L1	11646	NM_181444	232431	Mm.23575	NM_181444	ENSMUSG00000046733	Gprc5a	Rai3|Raig1	G protein-coupled receptor, family C, group 5, member A	protein-coding
common_peak1-13216-104-93-0.75015634953452-3.99818876989743	chr19	24223725	24226040	+	0	NA	intron (NM_011597, intron 1 of 22)	intron (NM_011597, intron 1 of 22)	23748	NM_001198985	21873	Mm.104744	NM_011597	ENSMUSG00000024812	Tjp2	ZO-2	tight junction protein 2	protein-coding
unique_peak1-739-14-3-1.89921616035764-2.80787975886178	chr10	108490179	108490790	+	0	NA	Intergenic	RMER6C|LTR|ERVK	-42453	NM_001252341	20979	Mm.289702	NM_009306	ENSMUSG00000035864	Syt1	AW124717|G630098F17Rik|SytI	synaptotagmin I	protein-coding
common_peak2-28926-36-43-0.0198894675304571-0.310901174692144	chr5	92823838	92825525	+	0	NA	intron (NM_181728, intron 4 of 9)	B2_Mm1a|SINE|B2	-32359	NR_038116	56066	Mm.131723	NM_019494	ENSMUSG00000060183	Cxcl11	Cxc11|H174|I-tac|Ip9|Itac|Scyb11|Scyb9b|b-R1|betaR1	chemokine (C-X-C motif) ligand 11	protein-coding
common_peak1-19267-7-10--0.660340788339108-1.12966497611638	chr9	114390083	114390574	+	0	NA	Intergenic	RSINE1|SINE|B4	15334	NM_009916	12773	Mm.1337	NM_009916	ENSMUSG00000047898	Ccr4	C-C CKR-4|CHEMR1|Cmkbr4|LESTR|Sdf1r	chemokine (C-C motif) receptor 4	protein-coding
common_peak1-16035-13-18--0.469455482805817-0.409888142029227	chr5	36582021	36582515	+	0	NA	intron (NM_030889, intron 1 of 26)	L1Md_T|LINE|L1	35598	NM_175249	76943	Mm.44242	NM_175249	ENSMUSG00000043430	Psapl1	2310020A21Rik	prosaposin-like 1	protein-coding
unique_peak2-35565-4-5--0.608423014574403-0.909929411522249	chr17	66564112	66564496	+	0	NA	Intergenic	Intergenic	91444	NM_001003919	320209	Mm.259605	NM_001003919	ENSMUSG00000035842	Ddx11	4732462I11Rik|CHL1|CHLR1|KRG2|essa15a	DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11	protein-coding
common_peak1-15741-121-154-0.291241376603761-1.12061944932	chr4	148625990	148627400	+	0	NA	intron (NM_207682, intron 14 of 46)	intron (NM_207682, intron 14 of 46)	55112	NM_207682	16561	Mm.402393	NM_008441	ENSMUSG00000063077	Kif1b	A530096N05Rik|AI448212|AI506502|D4Mil1e|KIF1Bp130|KIF1Bp204	kinesin family member 1B	protein-coding
unique_peak2-33281-6-5--0.0195643903408542-0.947717972411649	chr11	8601493	8601881	+	0	NA	Intergenic	Intergenic	-37149	NM_001083587	319939	Mm.337820	NM_001083587	ENSMUSG00000020422	Tns3	BC023928|F830010I22Rik|TEM6|Tens1	tensin 3	protein-coding
common_peak2-22190-10-8-0.186490343566457-1.078512453669	chr12	108244406	108245015	+	0	NA	Intergenic	Intergenic	-290176	NR_015512	71033	Mm.159404	NR_015512	ENSMUSG00000085820	4933406K04Rik	4930426M03Rik|4930485I22Rik|4933427G14Rik	RIKEN cDNA 4933406K04 gene	ncRNA
unique_peak1-3564-9-1-2.18961340640422-2.31132995230379	chr19	27309095	27309582	+	0	NA	exon (NM_001161420, exon 3 of 18)	exon (NM_001161420, exon 3 of 18)	17828	NM_001161420	22359	Mm.4141	NM_013703	ENSMUSG00000024924	Vldlr	AA408956|AI451093|AW047288	very low density lipoprotein receptor	protein-coding
common_peak2-28497-33-29-0.42444696691701-0.683454027796267	chr5	110230942	110231592	+	0	NA	Intergenic	RLTR22_Mus|LTR|ERVK	31894	NR_027964	667213	Mm.454429	NR_027964		Gm10416	EG667213|ENSMUSG00000072761	zinc finger protein pseudogene	pseudo
unique_peak2-39979-6-16--1.52206473087004-1.32521814697968	chrX	153497483	153498116	+	0	NA	Intergenic	L1_Mus3|LINE|L1	355419	NM_011077	18675	Mm.2529	NM_011077	ENSMUSG00000057457	Phex	Gy|HPDR|HPDR1|Hyp|PEX	phosphate regulating endopeptidase homolog, X-linked	protein-coding
common_peak2-26545-26-21-0.468467473521165-0.647723624534446	chr2	92750002	92750793	+	0	NA	Intergenic	GA-rich|Low_complexity|Low_complexity	-4861	NM_030725	80976	Mm.33490	NM_030725	ENSMUSG00000027220	Syt13	5730409J20Rik|AI549909|mKIAA1427	synaptotagmin XIII	protein-coding
common_peak1-14769-28-26-0.298071617657994-0.481798116163919	chr3	88510027	88511409	+	0	NA	intron (NM_028814, intron 10 of 13)	intron (NM_028814, intron 10 of 13)	-10058	NM_009069	19769	Mm.4009	NM_009069		Rit1	RIBB|ROC1|Rit	Ras-like without CAAX 1	protein-coding
common_peak2-31103-16-31--0.881736357731938-1.20073456579999	chr8	27176834	27177818	+	0	NA	intron (NM_207659, intron 13 of 21)	intron (NM_207659, intron 13 of 21)	-15755	NR_110583	76604	Mm.437190	NR_110583		1700047A11Rik	4930554C15Rik	RIKEN cDNA 1700047A11 gene	ncRNA
unique_peak2-38233-7-6--0.00826409175941478-0.97990265578305	chr6	117906017	117906348	+	0	NA	Intergenic	Intergenic	-18829	NM_001173372	108017	Mm.250392	NM_033648		Fxyd4	0610008I02Rik|AI267073|Chif	FXYD domain-containing ion transport regulator 4	protein-coding
unique_peak1-1914-11-5-0.923731083530457-1.477227296591	chr14	70554281	70554825	+	0	NA	promoter-TSS (NM_146055)	promoter-TSS (NM_146055)	-955	NM_146055	219158	Mm.218284	NM_146055	ENSMUSG00000033712	Ccar2	2610301G19Rik|mKIAA1967	cell cycle activator and apoptosis regulator 2	protein-coding
common_peak1-15470-11-7-0.508693584251613-1.21681515183528	chr4	107066318	107066958	+	0	NA	intron (NM_028355, intron 14 of 17)	intron (NM_028355, intron 14 of 17)	26249	NM_028355	72787	Mm.28478	NM_028355	ENSMUSG00000028614	Ndc1	2810475A17Rik|AI450313|Tmem48	NDC1 transmembrane nucleoporin	protein-coding
unique_peak2-39300-10-22--1.16714661104824-1.30248952876293	chr8	123442883	123443691	+	0	NA	Intergenic	Intergenic	163645	NR_045471	68790	Mm.246916	NR_045471	ENSMUSG00000097336	Fendrr	1110050K14Rik|linc-Foxf1a	Foxf1 adjacent non-coding developmental regulatory RNA	ncRNA
unique_peak2-32624-7-6--0.00826409175941478-0.97990265578305	chr1	119643311	119643720	+	0	NA	Intergenic	Intergenic	564194	NM_011650	22099	Mm.426637	NM_011650	ENSMUSG00000026374	Tsn	2610034C24Rik|AU040286|C3PO|TB-RBP	translin	protein-coding
unique_peak1-3098-12-2-2.06381348436648-2.79529063155376	chr18	25646255	25646781	+	0	NA	intron (NM_001174074, intron 10 of 11)	intron (NM_001174074, intron 10 of 11)	265966	NM_133195	108013	Mm.266435	NM_133195	ENSMUSG00000024268	Celf4	A230070D14Rik|BRUNOL-4|Brul4|Brunol4|C130060B05Rik	CUGBP, Elav-like family member 4	protein-coding
common_peak1-11038-17-27--0.589058583852566-0.604689589251113	chr15	43477160	43477997	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	168803	NM_025736	66736	Mm.244512	NM_025736	ENSMUSG00000022337	Emc2	4921531G14Rik|AV060620|AW209495|Ttc35	ER membrane protein complex subunit 2	protein-coding
unique_peak2-36029-1-5--2.2120195109379-1.32905871926422	chr19	42893799	42894226	+	0	NA	intron (NM_001081257, intron 9 of 11)	intron (NM_001081257, intron 9 of 11)	-39546	NM_019424	192236	Mm.218381	NM_019424	ENSMUSG00000025188	Hps1	6030422N11Rik|BB405864|Gm21361|Hps|ep	Hermansky-Pudlak syndrome 1 homolog (human)	protein-coding
common_peak2-27029-21-21-0.110057646628938-0.344491671143527	chr2	174463528	174464230	+	0	NA	Intergenic	B4A|SINE|B4	-5156	NM_001099328	100043757	Mm.48711	NM_001099328	ENSMUSG00000050600	Zfp831	ENSMUSG00000050600|OTTMUSG00000017459	zinc finger protein 831	protein-coding
common_peak1-17919-14-10-0.439784541720347-0.519648556297791	chr7	126625129	126625710	+	0	NA	Intergenic	Intergenic	-2643	NM_001278605	22242	Mm.10826	NM_009470	ENSMUSG00000030963	Umod	THP|Urehd1|urehr4	uromodulin	protein-coding
common_peak1-16475-27-35--0.178379050547076-0.330208782692001	chr5	137338375	137339675	+	0	NA	intron (NM_024474, intron 1 of 12)	ID_B1|SINE|B4	19952	NM_024474	140709	Mm.295020	NM_024474	ENSMUSG00000004415	Col26a1	9430032K24Rik|BC002218|Col26a|Emid2|Emu2	collagen, type XXVI, alpha 1	protein-coding
unique_peak2-32460-5-11--1.28934283672701-1.477227296591	chr1	13660898	13661300	+	0	NA	intron (NM_001011873, intron 1 of 3)	intron (NM_001011873, intron 1 of 3)	2247	NM_001011873	381246	Mm.311142	NM_001011873	ENSMUSG00000067813	Xkr9	Gm1620|XRG9	X Kell blood group precursor related family member 9 homolog	protein-coding
unique_peak1-5381-8-1-2.00522241794757-2.05605744720049	chr5	99961068	99961590	+	0	NA	intron (NR_030692, intron 2 of 3)	B3|SINE|B2	196750	NR_030692	319818	Mm.295233	NR_030692	ENSMUSG00000089809	A930011G23Rik	-	RIKEN cDNA A930011G23 gene	ncRNA
unique_peak2-37334-6-5--0.0195643903408542-0.947717972411649	chr4	130308800	130309198	+	0	NA	intron (NM_030722, intron 13 of 21)	intron (NM_030722, intron 13 of 21)	3446	NR_028565	100217460		NR_028565		Snord85	MBII-251|Z50	small nucleolar RNA, C/D box 85	snoRNA
common_peak2-27501-32-50--0.393333322751835-0.597008909195482	chr3	95015637	95016531	+	0	NA	intron (NM_029885, intron 2 of 9)	B1_Mur3|SINE|Alu	-5295	NR_108026	100504029	Mm.478537	NR_108026	ENSMUSG00000097167	Gm16740	-	predicted gene, 16740	ncRNA
common_peak1-10886-111-135-0.330230950159829-1.22284578936291	chr15	83148318	83149935	+	0	NA	intron (NM_025445, intron 9 of 15)	intron (NM_025445, intron 9 of 15)	31551	NM_025445	66251	Mm.258910	NM_025445	ENSMUSG00000054277	Arfgap3	0610009H19Rik|1810004P07Rik|1810035F16Rik|9130416J18Rik|Arfgap1	ADP-ribosylation factor GTPase activating protein 3	protein-coding
unique_peak2-32831-3-6--1.22133801201688-1.08602067057793	chr1	191055145	191055499	+	0	NA	intron (NM_001281847, intron 6 of 6)	B1F|SINE|Alu	111910	NM_001159850	16526	Mm.33304	NM_010607	ENSMUSG00000037624	Kcnk2	A430027H14Rik|AI848635|TREK-1	potassium channel, subfamily K, member 2	protein-coding
common_peak2-21243-72-93-0.11399496119468-0.391261669680795	chr11	68852335	68854662	+	0	NA	Intergenic	CpG	-5647	NM_011496	20877	Mm.3488	NM_011496	ENSMUSG00000020897	Aurkb	AIM-1|AIRK2|AL022959|Aik2|Aim1|Ark2|AurB|IPL1|STK-1|Stk12|Stk5	aurora kinase B	protein-coding
unique_peak2-39593-1-7--2.62705701021674-1.80617997398389	chr9	77482128	77482519	+	0	NA	Intergenic	Intergenic	-2216	NM_172925	244923	Mm.138238	NM_172925	ENSMUSG00000044938	Klhl31	9830147P19Rik|D930047P17Rik|Kbtbd1	kelch-like 31	protein-coding
unique_peak2-39217-4-9--1.34538860874061-1.36011389749466	chr8	107535033	107535613	+	0	NA	intron (NM_001272045, intron 1 of 11)	MLT-int|LTR|MaLR	10570	NM_001272045	436059	Mm.491825	NM_001272045	ENSMUSG00000091813	Ces2h	Ces2|EG436059|Gm5744	carboxylesterase 2H	protein-coding
common_peak1-10521-27-25-0.291106232754144-0.488172498216822	chr14	8080035	8081099	+	0	NA	Intergenic	Intergenic	-73520	NM_001270812	100861615	Mm.488431	NM_001270812	ENSMUSG00000079396	LOC100861615	-	alpha takusan-like	protein-coding
unique_peak2-37721-8-9--0.316705676939792-1.03275496310833	chr5	105792162	105792666	+	0	NA	Intergenic	ETnERV3-int|LTR|ERVK	-16923	NM_001039647	634650	Mm.458435	NM_001039647	ENSMUSG00000092021	Gbp11	EG634650|Gm7141	guanylate binding protein 11	protein-coding
common_peak1-12152-12-6-0.841421063030034-1.58711810488664	chr17	28340759	28341413	+	0	NA	intron (NM_172617, intron 13 of 14)	intron (NM_172617, intron 13 of 14)	-3637	NM_027185	23853	Mm.204731	NM_027185	ENSMUSG00000002257	Def6	2410003F05Rik|6430538D02Rik|AV094905|Ibp|Slat|Slat2|Slat6	differentially expressed in FDCP 6	protein-coding
unique_peak2-33085-7-7--0.200909169701811-0.97990265578305	chr10	80148138	80148588	+	0	NA	3' UTR (NM_172457, exon 4 of 4)	3' UTR (NM_172457, exon 4 of 4)	-13642	NM_021462	17347	Mm.42126	NM_021462	ENSMUSG00000020190	Mknk2	2010016G11Rik|Gprk7|Mnk2	MAP kinase-interacting serine/threonine kinase 2	protein-coding
common_peak1-18355-47-44-0.442988328436873-0.901340839087553	chr8	69935153	69936911	+	0	NA	Intergenic	L1Md_A|LINE|L1	-78625	NM_008673	17960	Mm.14125	NM_008673	ENSMUSG00000025588	Nat1	Nat-1	N-acetyl transferase 1	protein-coding
unique_peak2-37231-6-10--0.894033508256995-1.21398586181642	chr4	88941444	88941833	+	0	NA	Intergenic	Intergenic	-1115	NM_009877	12578	Mm.4733	NM_009877	ENSMUSG00000044303	Cdkn2a	ARF-INK4a|Arf|INK4a-ARF|Ink4a/Arf|MTS1|Pctr1|p16|p16(INK4a)|p16INK4a|p19<ARF>|p19ARF	cyclin-dependent kinase inhibitor 2A	protein-coding
common_peak2-24078-14-26--0.855671341805824-0.949797625454538	chr16	31200453	31201381	+	0	NA	intron (NM_030138, intron 1 of 22)	CpG	407	NM_030138	78618	Mm.274646	NM_030138	ENSMUSG00000049076	Acap2	4832442G16|9530039J15Rik|CNT-B2|Centb2|mKIAA0041	ArfGAP with coiled-coil, ankyrin repeat and PH domains 2	protein-coding
unique_peak1-1742-13-3-1.77847203063777-2.58603100924543	chr13	102109714	102110401	+	0	NA	Intergenic	L1_Mur3|LINE|L1	57478	NR_046187	78136	Mm.399065	NR_046187		4922502H24Rik	-	RIKEN cDNA 4922502H24 gene	ncRNA
common_peak2-25157-7-7--0.200909169701811-0.97990265578305	chr18	50010549	50010968	+	0	NA	intron (NM_001081371, intron 5 of 42)	ID4|SINE|ID	18107	NM_001081371	240283	Mm.257790	NM_001081371	ENSMUSG00000037416	Dmxl1	C630007L23Rik|D030030C22	Dmx-like 1	protein-coding
common_peak2-22473-86-143--0.194289207409959-0.534477550943962	chr13	48545920	48546723	+	0	NA	Intergenic	Intergenic	62458	NM_001164575	67911	Mm.251375	NM_026450	ENSMUSG00000050954	Zfp169	1700025J14Rik|4930429A13Rik|BE688704	zinc finger protein 169	protein-coding
common_peak1-9359-48-99--0.67292903853991-2.05279581805583	chr11	97449372	97451023	+	0	NA	Intergenic	Intergenic	-9628	NR_045496	69729	Mm.233452	NR_045496	ENSMUSG00000085860	2410003L11Rik	-	RIKEN cDNA 2410003L11 gene	ncRNA
common_peak1-8507-53-89--0.350880083913746-0.74168542740463	chr10	82628950	82630452	+	0	NA	intron (NM_021439, intron 2 of 2)	intron (NM_021439, intron 2 of 2)	170861	NM_177388	338365	Mm.67073	NM_177388	ENSMUSG00000034591	Slc41a2	A230035L05Rik|SLC41A1-L1	solute carrier family 41, member 2	protein-coding
common_peak1-12203-16-41--1.2740537805107-2.52371590646434	chr17	33628895	33629677	+	0	NA	Intergenic	B4|SINE|B4	-31855	NR_037707	224697	Mm.29304	NM_172619	ENSMUSG00000024299	Adamts10	9430006O18|AW045948|Adam-ts10|Adamts-10|Znmp	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10	protein-coding
common_peak1-17660-22-38--0.638118113774844-0.887741995158868	chr7	63939126	63940110	+	0	NA	Intergenic	L1Md_T|LINE|L1	444477	NM_021879	18431	Mm.137052	NM_021879	ENSMUSG00000030450	Oca2	D7H15S12|D7Icr28RN|D7Nic1|p	oculocutaneous albinism II	protein-coding
common_peak1-7443-50-75--0.206987196964633-0.425859000017569	chr1	52231877	52233379	+	0	NA	intron (NM_001081081, intron 14 of 17)	intron (NM_001081081, intron 14 of 17)	56162	NM_001205313	20846	Mm.277406	NM_009283	ENSMUSG00000026104	Stat1	2010005J02Rik|AA408197	signal transducer and activator of transcription 1	protein-coding
common_peak1-9103-14-18--0.348711353085941-0.360333814299795	chr11	70655528	70656260	+	0	NA	Intergenic	PB1D7|SINE|Alu	-2369	NM_001291143	54189	Mm.7087	NM_019400	ENSMUSG00000020817	Rabep1	Rab5ep|rabaptin-5|rabaptin-5alpha	rabaptin, RAB GTPase binding effector protein 1	protein-coding
unique_peak1-3411-9-3-1.18961340640422-1.57096726280955	chr19	5805147	5805728	+	0	NA	Intergenic	Intergenic	-2766	NR_002847	72289	Mm.298256	NR_002847	ENSMUSG00000092341	Malat1	2210401K01Rik|9430072K23Rik|AI647968|Neat2	metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)	ncRNA
common_peak2-30204-58-59-0.389059339281978-0.932664372754135	chr7	66387278	66388682	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-96140	NM_173010	22215	Mm.9002	NM_011668	ENSMUSG00000025326	Ube3a	4732496B02|5830462N02Rik|A130086L21Rik|Hpve6a|mKIAA4216	ubiquitin protein ligase E3A	protein-coding
common_peak1-13594-27-52--0.736374503667963-1.34506277748691	chr2	18047469	18048421	+	0	NA	intron (NR_045538, intron 8 of 22)	intron (NR_045538, intron 8 of 22)	61733	NM_001252561	17354	Mm.209175	NM_010804	ENSMUSG00000026743	Mllt10	Af10|B130021D15Rik|D630001B22Rik|mKIAA4140	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	protein-coding
common_peak1-9878-11-8-0.338768582809301-1.14218153353838	chr12	84285206	84285710	+	0	NA	Intergenic	Intergenic	-245316	NR_046045	74283	Mm.398247	NR_046045		1700085C21Rik	-	RIKEN cDNA 1700085C21 gene	ncRNA
common_peak1-14439-41-34-0.571865687903694-1.12519986426579	chr2	181496970	181498000	+	0	NA	promoter-TSS (NM_001171615)	promoter-TSS (NM_001171615)	-552	NM_001171615	17932	Mm.458718	NM_008665	ENSMUSG00000010505	Myt1	Nzf2|Nzf2a|Nzf2b|Nztf2	myelin transcription factor 1	protein-coding
unique_peak2-32843-13-18--0.469455482805817-0.409888142029227	chr1	193419680	193420681	+	0	NA	exon (NM_178632, exon 6 of 20)	exon (NM_178632, exon 6 of 20)	20567	NM_178632	77065	Mm.338175	NM_178632	ENSMUSG00000037461	Ints7	5930412E23Rik	integrator complex subunit 7	protein-coding
unique_peak1-3549-8-1-2.00522241794757-2.05605744720049	chr19	24327136	24327629	+	0	NA	Intergenic	RLTR11A2|LTR|ERVK	27694	NM_008044	14297	Mm.7319	NM_008044	ENSMUSG00000059363	Fxn	FA|FARR|Frda|X25	frataxin	protein-coding
unique_peak2-34061-10-20--1.03590207776999-1.03889213727317	chr13	45694454	45695405	+	0	NA	intron (NM_001199304, intron 5 of 6)	B4|SINE|B4	92091	NM_025508	66355	Mm.290802	NM_025508	ENSMUSG00000000253	Gmpr	2310004P21Rik|AV028449	guanosine monophosphate reductase	protein-coding
common_peak1-13968-8-3-1.00522241794757-1.39487600375387	chr2	92743829	92744245	+	0	NA	Intergenic	Intergenic	-11221	NM_030725	80976	Mm.33490	NM_030725	ENSMUSG00000027220	Syt13	5730409J20Rik|AI549909|mKIAA1427	synaptotagmin XIII	protein-coding
common_peak2-25426-71-50-0.972018836748476-3.99034070370996	chr19	3575012	3576232	+	0	NA	intron (NM_029456, intron 1 of 22)	CpG	127	NM_001164159	52036	Mm.284686	NM_028999	ENSMUSG00000024908	Ppp6r3	4930528G08Rik|9130026N02Rik|D19Bwg1430e|D19Ertd703e|Pp6r3|Ppcs3|Pptcs3|Sapl|Saps3|mKIAA1558	protein phosphatase 6, regulatory subunit 3	protein-coding
common_peak1-9822-15-23--0.5727977501655-0.575340103425218	chr12	71014986	71015632	+	0	NA	intron (NM_178628, intron 2 of 14)	Lx9|LINE|L1	-21159	NM_201519	399510	Mm.291936	NM_201519	ENSMUSG00000034761	Map4k5	4432415E19Rik|GCKR|KHS|MAPKKKK5	mitogen-activated protein kinase kinase kinase kinase 5	protein-coding
unique_peak2-37948-4-6--0.830815435910851-0.989110657569874	chr5	149618020	149618449	+	0	NA	Intergenic	MT2A|LTR|ERVL	64818	NR_028285	70138	Mm.417834	NR_028285	ENSMUSG00000086494	2210417A02Rik	AV081004	RIKEN cDNA 2210417A02 gene	ncRNA
common_peak2-20789-30-56--0.663214604672868-1.25272902092874	chr10	121586202	121587475	+	0	NA	Intergenic	Intergenic	30085	NR_027637	100043513	Mm.429141	NR_027637		Gm4489	Gm241	predicted gene 4489	ncRNA
common_peak1-7799-14-12-0.198776442216552-0.373562084705529	chr1	107589943	107590662	+	0	NA	intron (NM_029349, intron 7 of 27)	intron (NM_029349, intron 7 of 27)	29864	NM_173187	227446	Mm.337339	NM_029349	ENSMUSG00000026319	2310035C23Rik	6430401N10|Kiaa1468|mKIAA1468	RIKEN cDNA 2310035C23 gene	protein-coding
unique_peak2-36704-6-6--0.241956811677302-0.947717972411649	chr3	49757184	49757559	+	0	NA	Intergenic	L1_Mm|LINE|L1	-196133	NM_130448	73173	Mm.87246	NM_130448	ENSMUSG00000037892	Pcdh18	3110038E07Rik|BB095589|PCDH68L	protocadherin 18	protein-coding
common_peak1-12543-44-31-0.821892834568535-1.99427374707394	chr18	5427348	5429085	+	0	NA	Intergenic	(G)n|Simple_repeat|Simple_repeat	-93779	NM_178722	240186	Mm.118257	NM_178722	ENSMUSG00000050945	Zfp438	9430031G09|9430091M14Rik|B830013J05Rik	zinc finger protein 438	protein-coding
common_peak2-26791-29-15-1.11229008061511-2.08778000015696	chr2	148030228	148030989	+	0	NA	Intergenic	Intergenic	-157903	NM_010446	15376	Mm.938	NM_010446	ENSMUSG00000037025	Foxa2	HNF3-beta|HNF3beta|Hnf-3b|Hnf3b|Tcf-3b|Tcf3b	forkhead box A2	protein-coding
common_peak2-24089-5-7--0.704380336005853-1.01466476204226	chr16	31602491	31602953	+	0	NA	Intergenic	Intergenic	-60807	NM_001252435	13383	Mm.382	NM_007862	ENSMUSG00000022770	Dlg1	B130052P05Rik|Dlgh1|E-dlg/SAP97|SAP-97|SAP97|mKIAA4187	discs, large homolog 1 (Drosophila)	protein-coding
common_peak2-26826-13-5-1.19350952991661-1.95509489018123	chr2	152728263	152728789	+	0	NA	Intergenic	Intergenic	-8562	NM_001081044	228785	Mm.250604	NM_001081044	ENSMUSG00000027470	Mylk2	9830004H17Rik|BB138278	myosin, light polypeptide kinase 2, skeletal muscle	protein-coding
unique_peak1-7135-8-2-1.42025991722641-1.65811743852845	chr9	54655600	54655999	+	0	NA	Intergenic	Intergenic	43244	NM_013496	12903	Mm.34797	NM_013496	ENSMUSG00000032291	Crabp1	AI326249|CRABP-I|Crabp-1|CrabpI|Rbp-5	cellular retinoic acid binding protein I	protein-coding
common_peak1-13653-8-6-0.197867495889966-1.03789460276074	chr2	26458255	26458771	+	0	NA	intron (NM_026212, intron 1 of 5)	intron (NM_026212, intron 1 of 5)	1424	NM_026212	67512	Mm.24244	NM_026212	ENSMUSG00000026922	Agpat2	2510002J07Rik|AV000834|BSCL|BSCL1|LPAAB|LPAAT-beta	1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta)	protein-coding
common_peak2-25857-34-26-0.627181024837798-1.12624088074371	chr19	42659515	42660381	+	0	NA	intron (NM_177464, intron 6 of 6)	intron (NM_177464, intron 6 of 6)	27348	NM_001164311	67573	Mm.178767	NM_053083	ENSMUSG00000025185	Loxl4	4833426I20Rik|Loxc	lysyl oxidase-like 4	protein-coding
unique_peak2-32881-0-5--3.42509343119537-1.32905871926422	chr10	9959391	9959596	+	0	NA	Intergenic	L1_Mus1|LINE|L1	232619	NM_001127353	215772	Mm.246573	NM_172547	ENSMUSG00000050994	Adgb	9130014G24Rik	androglobin	protein-coding
common_peak1-7797-13-14--0.12841856497075-0.301029995663977	chr1	106759783	106760484	+	0	NA	intron (NM_011800, intron 1 of 11)	L1Md_F2|LINE|L1	94737	NM_011800	23836	Mm.103640	NM_011800	ENSMUSG00000050840	Cdh20	Cdh7	cadherin 20	protein-coding
common_peak1-13975-37-20-1.13367564870706-2.58657013435546	chr2	94178090	94179088	+	0	NA	intron (NM_183106, intron 17 of 24)	intron (NM_183106, intron 17 of 24)	68257	NM_183106	74569	Mm.248504	NM_183106	ENSMUSG00000027194	Ttc17	9130020K17Rik|D2Bwg1005e	tetratricopeptide repeat domain 17	protein-coding
unique_peak2-38710-7-6--0.00826409175941478-0.97990265578305	chr7	110647415	110647867	+	0	NA	Intergenic	Lx8|LINE|L1	-6251	NM_147082	259086	Mm.377831	NM_147082	ENSMUSG00000046396	Olfr609	MOR9-1	olfactory receptor 609	protein-coding
common_peak2-28089-11-15--0.491306415748387-0.435191258261915	chr4	86634567	86635160	+	0	NA	3' UTR (NM_001110240, exon 10 of 10)	3' UTR (NM_001110240, exon 10 of 10)	114545	NM_139306	230379	Mm.45019	NM_139306	ENSMUSG00000038007	Acer2	2410116I05Rik|Asah3l|CRG-L1|maCER2	alkaline ceramidase 2	protein-coding
common_peak1-15382-63-33-1.35084974982025-5.77201494341687	chr4	63402350	63404166	+	0	NA	intron (NM_177371, intron 1 of 3)	intron (NM_177371, intron 1 of 3)	2889	NM_177371	326623	Mm.208152	NM_177371		Tnfsf15	Tl1|Tl1a|Vegi	tumor necrosis factor (ligand) superfamily, member 15	protein-coding
common_peak2-20496-13-29--1.12841856497075-1.46151065785802	chr10	58323498	58324074	+	0	NA	intron (NM_172788, intron 1 of 9)	Lx8|LINE|L1	47679	NM_172788	237353	Mm.333078	NM_172788	ENSMUSG00000037990	Sh3rf3	4831416G18Rik|Igfbp5-ip|Sh3md4|Sh3rf31	SH3 domain containing ring finger 3	protein-coding
unique_peak2-37022-5-14--1.61127093161437-1.95509489018123	chr3	126660385	126660846	+	0	NA	intron (NM_178655, intron 10 of 24)	intron (NM_178655, intron 10 of 24)	-14311	NM_001034168	109676	Mm.220242	NM_178655	ENSMUSG00000032826	Ank2	AI835472|AW491075|Ank-2	ankyrin 2, brain	protein-coding
common_peak1-15876-10-19--0.965512749878593-0.917676348953458	chr5	5748867	5749518	+	0	NA	intron (NM_027399, intron 1 of 4)	CpG	125	NM_027399	70358	Mm.85429	NM_027399	ENSMUSG00000015652	Steap1	2410007B19Rik|Prss24|Steap	six transmembrane epithelial antigen of the prostate 1	protein-coding
common_peak2-31543-45-45-0.336796069287859-0.658272150962117	chr8	111536051	111537380	+	0	NA	Intergenic	Intergenic	75955	NR_037295	100526511		NR_037295		Mir3108	mmu-mir-3108	microRNA 3108	ncRNA
common_peak1-14458-48-53-0.216039649071346-0.488458446780741	chr3	30981051	30982560	+	0	NA	Intergenic	Intergenic	-12175	NM_011386	20482	Mm.15406	NM_011386	ENSMUSG00000027660	Skil	Skir|SnoN|sno	SKI-like	protein-coding
common_peak2-26925-13-29--1.12841856497075-1.46151065785802	chr2	163552828	163553623	+	0	NA	intron (NM_001272052, intron 11 of 11)	intron (NM_001272052, intron 11 of 11)	22750	NM_007398	11486	Mm.388	NM_007398	ENSMUSG00000017697	Ada	-	adenosine deaminase	protein-coding
common_peak2-22553-9-12--0.510826311736872-0.394412252720706	chr13	62558362	62559019	+	0	NA	intron (NM_001136496, intron 1 of 2)	B2_Mm2|SINE|B2	9482	NM_178875	71508	Mm.442497	NM_178875		Zfp935	8430426H19Rik|Es113	zinc finger protein 935	protein-coding
unique_peak2-39157-7-6--0.00826409175941478-0.97990265578305	chr8	91226539	91226957	+	0	NA	intron (NM_001128171, intron 2 of 17)	Lx8|LINE|L1	5821	NM_001128171	74256	Mm.490395	NM_173369	ENSMUSG00000036712	Cyld	2010013M14Rik|2900009M21Rik|C130039D01Rik|CDMT|CYLD1|EAC|mKIAA0849	cylindromatosis (turban tumor syndrome)	protein-coding
common_peak2-23065-13-8-0.608547029195456-0.660903317613904	chr14	73234380	73234731	+	0	NA	Intergenic	(GGAA)n|Simple_repeat|Simple_repeat	-124745	NM_207636	319448	Mm.205421	NM_207636	ENSMUSG00000033487	Fndc3a	1700094E19Rik|D14Ertd453e|F730017H24Rik|Fndc3|sys	fibronectin type III domain containing 3A	protein-coding
common_peak2-20333-26-60--1.00283824540442-2.51461642049155	chr10	4107372	4108683	+	0	NA	Intergenic	Intergenic	-316114	NM_001161822	56533	Mm.44606	NM_019958	ENSMUSG00000019775	Rgs17	6430507P11Rik|Rgsz2	regulator of G-protein signaling 17	protein-coding
common_peak1-13253-72-50-0.996158470900823-4.2430817055002	chr19	32345167	32347548	+	0	NA	intron (NM_001168525, intron 2 of 9)	intron (NM_001168525, intron 2 of 9)	-60854	NM_001168526	208449	Mm.329810	NM_144792	ENSMUSG00000040451	Sgms1	9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23	sphingomyelin synthase 1	protein-coding
common_peak2-24002-10-11--0.228547155712387-0.31137425193576	chr16	20535505	20535978	+	0	NA	intron (NM_009679, intron 1 of 10)	CpG	164	NM_009679	11773	Mm.18946	NM_009679	ENSMUSG00000022841	Ap2m1	-	adaptor-related protein complex 2, mu 1 subunit	protein-coding
common_peak1-14740-95-44-1.65606224869434-12.1000642324183	chr3	87114954	87117416	+	0	NA	Intergenic	B3A|SINE|B2	-45618	NM_009690	11801	Mm.6676	NM_009690	ENSMUSG00000015854	Cd5l	1/6|AAC-11|AI047839|Api6|CT2|Pdp|Sp-alpha	CD5 antigen-like	protein-coding
common_peak2-23632-10-10--0.103016273628528-0.301029995663987	chr15	83412123	83412589	+	0	NA	intron (NM_183017, intron 8 of 13)	intron (NM_183017, intron 8 of 13)	13231	NM_183017	223723	Mm.46778	NM_183017	ENSMUSG00000016757	Ttll12	BC055368|D430005B17	tubulin tyrosine ligase-like family, member 12	protein-coding
unique_peak1-5960-12-3-1.64877598508764-2.36932189928148	chr6	93256333	93257069	+	0	NA	Intergenic	Intergenic	366125	NR_015530	330385	Mm.483472	NR_015530	ENSMUSG00000097462	9530026P05Rik	B430306B02	RIKEN cDNA 9530026P05 gene	ncRNA
common_peak2-25700-61-47-0.797786829028184-2.49437462228564	chr19	18712322	18713822	+	0	NA	intron (NM_145497, intron 2 of 8)	Charlie4a|DNA|MER1_type	6566	NM_145497	225994	Mm.211595	NM_145497	ENSMUSG00000037847	Nmrk1	AA408380|D630020N23Rik|Nrk1	nicotinamide riboside kinase 1	protein-coding
common_peak2-22692-12-12--0.0516637330534535-0.309718203022949	chr13	98546276	98546832	+	0	NA	Intergenic	Intergenic	216599	NR_046157	328314	Mm.138047	NR_046157		Gm5086	B230311A21|EG328314	predicted gene 5086	ncRNA
common_peak1-15513-7-11--0.785871670422967-1.21681515183528	chr4	116807246	116807672	+	0	NA	promoter-TSS (NM_013807)	promoter-TSS (NM_013807)	-902	NM_013807	12795	Mm.259022	NM_013807	ENSMUSG00000028680	Plk3	Cnk|Fnk|PRK	polo-like kinase 3	protein-coding
unique_peak2-39528-1-8--2.79698201165906-2.05605744720049	chr9	65907858	65908372	+	0	NA	exon (NM_011149, exon 1 of 5)	exon (NM_011149, exon 1 of 5)	139	NM_011149	19035	Mm.335249	NM_011149	ENSMUSG00000032383	Ppib	AA408962|AA553318|AI844835|Cphn-2|Cphn2|CyP-20b	peptidylprolyl isomerase B	protein-coding
unique_peak2-33776-8-15--0.994777582052429-0.771068449301683	chr11	118429640	118430273	+	0	NA	intron (NM_001285436, intron 3 of 13)	intron (NM_001285436, intron 3 of 13)	91682	NM_172573	217364	Mm.473963	NM_172573	ENSMUSG00000033857	Engase	C130099A03|D230014K01Rik	endo-beta-N-acetylglucosaminidase	protein-coding
unique_peak2-34867-7-10--0.660340788339108-1.12966497611638	chr15	77818629	77819231	+	0	NA	Intergenic	MER63B|DNA|AcHobo	-17676	NM_018749	55944	Mm.3955	NM_018749	ENSMUSG00000016554	Eif3d	66/67kDa|AA407891|Eif3s7|eIF3p66	eukaryotic translation initiation factor 3, subunit D	protein-coding
common_peak1-16774-10-28--1.5015656501188-2.22881803703862	chr6	37805882	37806215	+	0	NA	Intergenic	Intergenic	-14763	NM_001272064	21848	Mm.41063	NM_145076		Trim24	A130082H20Rik|AI447469|D430004I05Rik|TIF1|TIF1-alpha|TIF1alpha|Tif1a	tripartite motif-containing 24	protein-coding
unique_peak2-36814-3-5--0.998945590680433-0.96108193396963	chr3	86021004	86021309	+	0	NA	Intergenic	Intergenic	-7456	NM_001077688	80877	Mm.439825	NM_030695	ENSMUSG00000028080	Lrba	C80285|D3Ertd775e|Lab300|Lba	LPS-responsive beige-like anchor	protein-coding
common_peak2-29658-71-131--0.399949940638482-1.20713136986345	chr6	71493637	71495089	+	0	NA	intron (NM_025783, intron 1 of 5)	CpG	515	NM_025783	66700	Mm.181278	NM_025783	ENSMUSG00000053119	Chmp3	25.1|4921505F14Rik|9130011K15Rik|CGI-49|D6Ertd286e|NEDF|Vps24	charged multivesicular body protein 3	protein-coding
common_peak1-18753-16-15-0.118263642268062-0.328191099940264	chr8	126589910	126590722	+	0	NA	Intergenic	Intergenic	42943	NM_001029876	382038	Mm.334891	NM_001029876	ENSMUSG00000031976	Urb2	C77575|mKIAA0133	URB2 ribosome biogenesis 2 homolog (S. cerevisiae)	protein-coding
common_peak2-22618-26-29-0.0210084965499435-0.304710633611964	chr13	77708434	77709290	+	0	NA	intron (NM_001145676, intron 19 of 19)	L1Md_Gf|LINE|L1	-139089	NM_001163420	68675	Mm.343005	NM_138312	ENSMUSG00000064138	Fam172a	1110033M05Rik|2610318O14Rik|53-E6|9430037D06Rik|AF064782|pEN87	family with sequence similarity 172, member A	protein-coding
common_peak1-17230-12-15--0.351224014912361-0.332077462497413	chr6	127358855	127359443	+	0	NA	Intergenic	Intergenic	-44592	NM_181402	101187	Mm.110818	NM_181402	ENSMUSG00000037997	Parp11	5330431N24Rik|AI851877|ARTD11|HIN1L	poly (ADP-ribose) polymerase family, member 11	protein-coding
unique_peak2-39389-5-7--0.704380336005853-1.01466476204226	chr9	22116734	22117160	+	0	NA	Intergenic	RMER19C|LTR|ERVK	-4865	NM_145612	235050	Mm.306038	NM_145612	ENSMUSG00000066829	Zfp810	BC005471	zinc finger protein 810	protein-coding
common_peak1-14471-15-18--0.235762762887929-0.326591483156968	chr3	98057666	98058251	+	0	NA	Intergenic	Intergenic	-26396	NM_008256	15360	Mm.289131	NM_008256	ENSMUSG00000027875	Hmgcs2	1300002P16|mHS	3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2	protein-coding
common_peak2-31953-15-21--0.447266868081641-0.448200956659578	chr9	65294135	65294893	+	0	NA	intron (NM_027134, intron 6 of 8)	intron (NM_027134, intron 6 of 8)	10925	NM_027134	69606	Mm.287956	NM_027134	ENSMUSG00000059183	Mtfmt	2310020P08Rik	mitochondrial methionyl-tRNA formyltransferase	protein-coding
common_peak2-26817-6-9--0.75652998450706-1.11707584880836	chr2	151572277	151572788	+	0	NA	Intergenic	(TC)n|Simple_repeat|Simple_repeat	-5503	NM_212446	228769	Mm.146984	NM_144889	ENSMUSG00000032869	Psmf1	AW048666|BC012260|PI31	proteasome (prosome, macropain) inhibitor subunit 1	protein-coding
common_peak2-27235-25-44--0.630003190984569-0.975110594803311	chr3	52045240	52046440	+	0	NA	Intergenic	MMERGLN-int|LTR|ERV1	-26419	NM_019739	56458	Mm.29891	NM_019739	ENSMUSG00000044167	Foxo1	AI876417|Afxh|FKHR|Fkhr1|Foxo1a	forkhead box O1	protein-coding
common_peak2-22505-9-6-0.382258484346616-1.11707584880836	chr13	52891539	52892017	+	0	NA	Intergenic	Intergenic	-39204	NR_027893	105404	Mm.184173	NR_027893		BB123696	-	expressed sequence BB123696	ncRNA
common_peak2-22304-16-11-0.533301141546906-0.58239619684445	chr13	19395870	19396273	+	0	NA	Intergenic	Intergenic	91550	NM_024270	76205	Mm.41940	NM_024270	ENSMUSG00000003062	Stard3nl	0610035N01Rik|6530409L22Rik|AW124774|MENTHO	STARD3 N-terminal like	protein-coding
common_peak2-20946-51-30-1.1207275152157-3.44473077378963	chr11	11808827	11810149	+	0	NA	Intergenic	Lx8|LINE|L1	-11341	NM_001190448	13195	Mm.12906	NM_016672	ENSMUSG00000020182	Ddc	Aadc	dopa decarboxylase	protein-coding
common_peak2-19673-28-64--0.969408693206992-2.49055970218346	chr1	55131197	55131908	+	0	NA	Intergenic	Lx8|LINE|L1	13224	NM_010477	15510	Mm.1777	NM_010477	ENSMUSG00000025980	Hspd1	60kDa|Hsp60	heat shock protein 1 (chaperonin)	protein-coding
common_peak2-30932-18-26--0.441968350935117-0.471456499375593	chr7	145111081	145111944	+	0	NA	Intergenic	Intergenic	477901	NM_183289	70571	Mm.334297	NM_183289	ENSMUSG00000091002	Tcerg1l	5730476P14Rik	transcription elongation regulator 1-like	protein-coding
unique_peak2-37782-3-9--1.73591118484664-1.57096726280955	chr5	117874036	117874596	+	0	NA	intron (NM_001114545, intron 1 of 19)	intron (NM_001114545, intron 1 of 19)	10305	NM_001114545	333050	Mm.437947	NM_001034873	ENSMUSG00000061578	Ksr2	-	kinase suppressor of ras 2	protein-coding
common_peak1-17446-48-39-0.648999056347452-1.53884632328361	chr7	16404588	16406834	+	0	NA	Intergenic	Intergenic	19317	NM_145710	252830	Mm.25863	NM_145710	ENSMUSG00000041583	Obox6	D17Ertd599e	oocyte specific homeobox 6	protein-coding
common_peak2-28698-9-19--1.13231468848314-1.09394599973099	chr5	34169059	34169577	+	0	NA	Intergenic	Intergenic	-16443	NM_175231	107823	Mm.19892	NM_175231	ENSMUSG00000057406	Whsc1	5830445G22Rik|9430010A17Rik|AW555663|C130020C13Rik|D030027O06Rik|D930023B08Rik|MMSET|NSD2|Whsc1l|mKIAA1090	Wolf-Hirschhorn syndrome candidate 1 (human)	protein-coding
unique_peak1-3998-9-0-3.18961340640422-3.01029995663981	chr2	35432424	35432912	+	0	NA	intron (NM_001114125, intron 1 of 16)	intron (NM_001114125, intron 1 of 16)	-5692	NM_001290637	69601	Mm.29629	NM_001001602	ENSMUSG00000026883	Dab2ip	2310011D08Rik|AI480459|Aip1|mKIAA1743	disabled 2 interacting protein	protein-coding
common_peak2-25863-69-84-0.185751511121031-0.503955412545943	chr19	43550359	43552094	+	0	NA	intron (NM_031396, intron 6 of 10)	intron (NM_031396, intron 6 of 10)	36300	NM_031396	83674	Mm.329864	NM_031396	ENSMUSG00000025189	Cnnm1	AI846314|Acdp1|CLP-1	cyclin M1	protein-coding
common_peak1-18915-8-7-0.00522241794757061-1.00793137938329	chr9	44234342	44234867	+	0	NA	Intergenic	MERVL_2A-int|LTR|ERVL	-8514	NM_201372	382073	Mm.259573	NM_201372	ENSMUSG00000043923	Ccdc84	D630044F24Rik|Gm1114	coiled-coil domain containing 84	protein-coding
unique_peak1-5419-7-4-0.477162735410827-1.09384600808989	chr5	112293059	112293579	+	0	NA	Intergenic	Intergenic	-102571	NR_045833	269683	Mm.136946	NM_207252	ENSMUSG00000085271	E130006D01Rik	Gm16018|Gm681|OTTMUSG00000029083	RIKEN cDNA E130006D01 gene	ncRNA
common_peak2-27332-55-142--0.955251465625687-5.02959097296909	chr3	69043843	69045907	+	0	NA	Intergenic	Intergenic	18534	NM_027843	71619	Mm.98122	NM_027843	ENSMUSG00000098207	Arl14	9130014L17Rik|Arf7	ADP-ribosylation factor-like 14	protein-coding
unique_peak1-2419-14-10-0.439784541720347-0.519648556297791	chr15	99847377	99848033	+	0	NA	TTS (NM_001024526)	TTS (NM_001024526)	-21390	NM_001159361	239667	Mm.243658	NM_172819	ENSMUSG00000023026	Dip2b	4932422C22|AI317237|AI854602|mKIAA1463	DIP2 disco-interacting protein 2 homolog B (Drosophila)	protein-coding
common_peak1-15319-15-31--0.987835249444344-1.35897270024963	chr4	45530259	45530832	+	0	NA	intron (NM_001033306, intron 1 of 5)	intron (NM_001033306, intron 1 of 5)	13155	NM_001033306	230126	Mm.251716	NM_001033306	ENSMUSG00000044813	Shb	BC028832	src homology 2 domain-containing transforming protein B	protein-coding
unique_peak2-32546-2-7--1.91745425626332-1.45399745587252	chr1	71880311	71880715	+	0	NA	Intergenic	B4A|SINE|B4	-54173	NR_027658	667931	Mm.214128	NR_027658		Gm8883	EG667931|Gm554	predicted gene 8883	ncRNA
unique_peak2-36697-2-7--1.91745425626332-1.45399745587252	chr3	36572137	36572423	+	0	NA	intron (NM_019510, intron 1 of 11)	(T)n|Simple_repeat|Simple_repeat	16809	NM_019510	22065	Mm.74363	NM_019510	ENSMUSG00000027716	Trpc3	Mwk|Trcp3|Trp3|Trrp3	transient receptor potential cation channel, subfamily C, member 3	protein-coding
common_peak2-25117-11-46--2.04589526742602-5.31705276927178	chr18	38296561	38297176	+	0	NA	Intergenic	L1_Mus3|LINE|L1	72548	NM_029357	75599	Mm.36560	NM_029357	ENSMUSG00000051375	Pcdh1	2010005A06Rik|AI585920	protocadherin 1	protein-coding
unique_peak1-216-21-5-1.98452676454508-3.24127775360835	chr1	87890846	87891705	+	0	NA	Intergenic	Intergenic	-27242	NM_001122732	70060	Mm.196313	NM_027029	ENSMUSG00000026226	Spata3	1700011N12Rik|1700029H01Rik|4930424D10Rik|Mtsarg1|Tsarg1	spermatogenesis associated 3	protein-coding
common_peak1-8978-9-12--0.510826311736872-0.394412252720706	chr11	58954536	58955004	+	0	NA	Intergenic	Intergenic	-4893	NM_199152	380698	Mm.339542	NM_199152	ENSMUSG00000061462	Obscn	BC046431|Gm878|OTTMUSG00000005786|UNC89	obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF	protein-coding
unique_peak2-36379-3-18--2.66191060340286-2.88232357121378	chr2	119112486	119113221	+	0	NA	Intergenic	ID_B1|SINE|B4	-1625	NM_172269	228545	Mm.294761	NM_172269	ENSMUSG00000034216	Vps18	9930024E13Rik	vacuolar protein sorting 18 (yeast)	protein-coding
common_peak1-10070-11-17--0.661231417190699-0.58239619684445	chr13	23423415	23423963	+	0	NA	Intergenic	RMER16-int|LTR|ERVK	37388	NM_001286156	218100	Mm.286454	NM_172586	ENSMUSG00000046351	Zfp322a	Znf322|Znf322a	zinc finger protein 322A	protein-coding
common_peak2-24292-83-255--1.08577737489387-10.9024544914694	chr17	15023213	15025118	+	0	NA	intron (NM_175173, intron 21 of 24)	intron (NM_175173, intron 21 of 24)	55964	NM_175173	71682	Mm.122698	NM_175173	ENSMUSG00000046991	Wdr27	0610012K18Rik	WD repeat domain 27	protein-coding
unique_peak1-6070-14-3-1.89921616035764-2.80787975886178	chr6	119336149	119336724	+	0	NA	intron (NM_197985, intron 1 of 7)	MER58A|DNA|MER1_type	31065	NM_197985	68465	Mm.291826	NM_197985	ENSMUSG00000030168	Adipor2	1110001I14Rik|ADCR2|AI115388|AW554121|D6Ucla1e|Paqr2	adiponectin receptor 2	protein-coding
common_peak2-27360-35-38-0.145968039600255-0.368093376636814	chr3	83840817	83841911	+	0	NA	intron (NM_172681, intron 2 of 34)	intron (NM_172681, intron 2 of 34)	2719	NM_172681	229473	Mm.28838	NM_172681	ENSMUSG00000033767	D930015E06Rik	Kiaa0922|mKIAA0922	RIKEN cDNA D930015E06 gene	protein-coding
unique_peak1-1857-8-2-1.42025991722641-1.65811743852845	chr14	54106954	54107259	+	0	NA	Intergenic	Intergenic	-178509	NM_001205242	100568452	Mm.213248	NM_001205242		A430107P09Rik	Va10	RIKEN cDNA A430107P09 gene	protein-coding
unique_peak2-37967-4-5--0.608423014574403-0.909929411522249	chr6	93257486	93257872	+	0	NA	Intergenic	Intergenic	367103	NR_015530	330385	Mm.483472	NR_015530	ENSMUSG00000097462	9530026P05Rik	B430306B02	RIKEN cDNA 9530026P05 gene	ncRNA
common_peak2-23333-6-8--0.60452689106201-1.03789460276074	chr15	38079060	38079562	+	0	NA	Intergenic	RMER16-int|LTR|ERVK	-69647	NM_008757	18285	Mm.252830	NM_008757	ENSMUSG00000061923	Odf1	-	outer dense fiber of sperm tails 1	protein-coding
common_peak1-18850-51-69--0.0543591913423933-0.307416909441837	chr9	20520702	20522074	+	0	NA	intron (NM_173777, intron 1 of 5)	CT-rich|Low_complexity|Low_complexity	11270	NM_173777	244723	Mm.293552	NM_173777	ENSMUSG00000032172	Olfm2	A030009A06Rik	olfactomedin 2	protein-coding
common_peak2-22452-5-7--0.704380336005853-1.01466476204226	chr13	42108608	42108986	+	0	NA	Intergenic	Intergenic	-38593	NM_007772	110521	Mm.4808	NM_007772	ENSMUSG00000021366	Hivep1	Cryabp1	human immunodeficiency virus type I enhancer binding protein 1	protein-coding
common_peak1-14165-23-21-0.262335885871783-0.416752705545949	chr2	138256525	138257466	+	0	NA	Intergenic	MLT1H2|LTR|MaLR	152766	NM_145534	228662	Mm.153405	NM_145534	ENSMUSG00000062098	Btbd3	mKIAA0952	BTB (POZ) domain containing 3	protein-coding
common_peak1-10009-124-98-0.980523699309071-7.40751059501187	chr13	5842914	5846677	+	0	NA	Intergenic	Intergenic	12543	NR_045891	71867	Mm.179181	NR_045891		1700016G22Rik	-	RIKEN cDNA 1700016G22 gene	ncRNA
common_peak2-26038-32-44--0.212761077110015-0.36647540798597	chr2	69860783	69862433	+	0	NA	3' UTR (NM_001081548, exon 39 of 39)	3' UTR (NM_001081548, exon 39 of 39)	-15575	NM_177376	329421	Mm.99648	NM_177376	ENSMUSG00000042064	Myo3b	A430065P19Rik	myosin IIIB	protein-coding
unique_peak2-36917-3-6--1.22133801201688-1.08602067057793	chr3	98374327	98374749	+	0	NA	Intergenic	ETnERV2-int|LTR|ERVK	-6577	NM_008294	15495	Mm.14309	NM_008294	ENSMUSG00000095143	Hsd3b4	-	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 4	protein-coding
unique_peak2-37824-12-15--0.351224014912361-0.332077462497413	chr5	129886722	129887304	+	0	NA	Intergenic	Intergenic	-120093	NM_172276	231769	Mm.288714	NM_172276	ENSMUSG00000029439	Sfswap	1190005N23Rik|6330437E22Rik|AI197402|AW212079|SWAP|Sfrs8|Srsf8	splicing factor, suppressor of white-apricot homolog (Drosophila)	protein-coding
common_peak2-26037-11-21--0.950738034385684-0.991115276827166	chr2	69205616	69206141	+	0	NA	Intergenic	L1_Rod|LINE|L1	-12641	NM_175512	241452	Mm.211655	NM_175512		Dhrs9	C730025I08Rik|Rdh15	dehydrogenase/reductase (SDR family) member 9	protein-coding
common_peak1-16884-44-51-0.121453116427443-0.373449689110125	chr6	71439604	71440671	+	0	NA	Intergenic	Intergenic	-3751	NM_009543	22644	Mm.422969	NM_009543	ENSMUSG00000052656	Rnf103	AW146237|AW212918|Zfp103|kf-1	ring finger protein 103	protein-coding
common_peak2-19562-13-14--0.12841856497075-0.301029995663977	chr1	9747777	9748385	+	0	NA	intron (NR_040462, intron 2 of 3)	intron (NR_040462, intron 2 of 3)	-9618	NM_173443	70675	Mm.274493	NM_173443		Vcpip1	4932442A08|5730421J18Rik|5730538E15Rik|VCIP135|mKIAA1850	valosin containing protein (p97)/p47 complex interacting protein 1	protein-coding
common_peak1-9594-50-49-0.397084126704228-0.848735523516959	chr11	119491181	119492189	+	0	NA	intron (NM_028898, intron 1 of 33)	L1_Mus2|LINE|L1	27376	NM_028898	74370	Mm.209933	NM_028898	ENSMUSG00000025583	Rptor	4932417H02Rik|Rap|Raptor|mKIAA1303	regulatory associated protein of MTOR, complex 1	protein-coding
common_peak2-22893-10-11--0.228547155712387-0.31137425193576	chr14	32159964	32160477	+	0	NA	intron (NM_009796, intron 4 of 20)	intron (NM_009796, intron 4 of 20)	10310	NM_009796	12339	Mm.201535	NM_009796	ENSMUSG00000021893	Capn7	AU022319|PalBH	calpain 7	protein-coding
common_peak2-23577-15-14-0.105274154947137-0.330004445983672	chr15	79773997	79774606	+	0	NA	Intergenic	Intergenic	-11225	NM_144811	52609	Mm.323442	NM_144811	ENSMUSG00000053411	Cbx7	1600014J01Rik|AI851678|D15Ertd417e	chromobox 7	protein-coding
common_peak2-27977-19-14-0.495796731053168-0.607095980551316	chr4	43398064	43398680	+	0	NA	intron (NM_001037709, intron 1 of 11)	L1MB3|LINE|L1	3518	NM_001037709	100213	Mm.235730	NM_199057	ENSMUSG00000035969	Rusc2	AI840675|mKIAA0375	RUN and SH3 domain containing 2	protein-coding
common_peak1-8795-69-22-2.07158049120172-11.3836682758809	chr11	19018327	19020450	+	0	NA	Intergenic	Intergenic	54110	NR_046037	74059	Mm.292321	NR_046037	ENSMUSG00000086025	4933406G16Rik	-	RIKEN cDNA 4933406G16 gene	ncRNA
common_peak1-13714-11-5-0.923731083530457-1.477227296591	chr2	30720493	30721106	+	0	NA	intron (NM_009116, intron 1 of 3)	intron (NM_009116, intron 1 of 3)	19912	NM_009116	20204	Mm.1802	NM_009116	ENSMUSG00000039476	Prrx2	Prx2|S8	paired related homeobox 2	protein-coding
unique_peak2-37102-0-6--3.64748585253182-1.56314192529759	chr3	159501091	159501520	+	0	NA	Intergenic	Intergenic	-1354	NR_037590	68151	Mm.6766	NM_026582		Wls	5031439A09Rik|AI173978|AI987742|Gpr177	wntless homolog (Drosophila)	protein-coding
unique_peak2-37798-3-5--0.998945590680433-0.96108193396963	chr5	122649286	122649671	+	0	NA	Intergenic	RLTR4_Mm|LTR|ERV1	-10260	NM_001042489	74096	Mm.28804	NM_028752	ENSMUSG00000064267	Hvcn1	0610039P13Rik|AI450555|BTS|HV1|Vsop.|mVSOP	hydrogen voltage-gated channel 1	protein-coding
unique_peak2-34008-4-6--0.830815435910851-0.989110657569874	chr12	102276108	102276528	+	0	NA	Intergenic	Intergenic	-9125	NM_026681	68339	Mm.156217	NM_026681	ENSMUSG00000021182	Ccdc88c	0610010D24Rik|AV000935|AW324073|Daple|mKIAA1509	coiled-coil domain containing 88C	protein-coding
unique_peak2-33127-2-9--2.23938235115068-1.87199725847353	chr10	81545212	81545577	+	0	NA	Intergenic	RMER10A|LTR|ERVL	34522	NM_001024626	408062	Mm.391409	NM_001024626		Zfp873	-	zinc finger protein 873	protein-coding
common_peak2-27247-19-12-0.702247608520594-0.840839978588874	chr3	52641908	52642535	+	0	NA	Intergenic	Intergenic	89367	NR_040555	622124	Mm.389434	NR_040555		Gm20750	-	predicted gene, 20750	ncRNA
unique_peak2-37894-2-12--2.61789397440441-2.55640854263862	chr5	140749359	140749785	+	0	NA	intron (NM_010752, intron 9 of 17)	intron (NM_010752, intron 9 of 17)	47934	NM_010752	17120	Mm.27250	NM_010752	ENSMUSG00000029554	Mad1l1	AI173502|AW550425|Mad1	MAD1 mitotic arrest deficient 1-like 1	protein-coding
unique_peak1-2303-18-2-2.7279566505072-4.01305082679061	chr15	81096195	81097164	+	0	NA	Intergenic	(CAGG)n|Simple_repeat|Simple_repeat	-14387	NR_077230	78102	Mm.296832	NR_077229		8430426J06Rik	-	RIKEN cDNA 8430426J06 gene	ncRNA
common_peak1-9952-20-38--0.797327434271056-1.23883036201157	chr12	111377124	111378075	+	0	NA	Intergenic	L1ME2z|LINE|L1	18684	NR_045466	67280	Mm.390495	NR_045466		3110009F21Rik	-	RIKEN cDNA 3110009F21 gene	ncRNA
unique_peak2-38819-4-12--1.72390023199434-1.85743853830261	chr7	139467258	139467985	+	0	NA	intron (NM_029935, intron 1 of 7)	intron (NM_029935, intron 1 of 7)	-39726	NR_028578	100043682	Mm.482794	NR_028578		Gm10584	ENSMUSG00000073814	predicted gene 10584	ncRNA
common_peak2-30841-9-6-0.382258484346616-1.11707584880836	chr7	133112815	133113149	+	0	NA	intron (NM_001101488, intron 2 of 6)	intron (NM_001101488, intron 2 of 6)	112943	NM_001101488	269994	Mm.39599	NM_001101488	ENSMUSG00000046182	Gsg1l	AI852434|C230098I05Rik|G630023A01Rik|Gm637|g1l	GSG1-like	protein-coding
common_peak2-29096-11-21--0.950738034385684-0.991115276827166	chr5	122422498	122423189	+	0	NA	intron (NM_007804, intron 2 of 22)	intron (NM_007804, intron 2 of 22)	74991	NM_007804	13048	Mm.156172	NM_007804	ENSMUSG00000042589	Cux2	1700051K22Rik|Cutl2|Cux-2|ENSMUSG00000072641	cut-like homeobox 2	protein-coding
common_peak1-15659-11-9-0.186765489364251-0.344532117358383	chr4	135986411	135987000	+	0	NA	intron (NM_001285484, intron 1 of 1)	intron (NM_001285484, intron 1 of 1)	6178	NM_001285484	15552	Mm.40573	NM_008309	ENSMUSG00000070687	Htr1d	5-HT-1D|5-HT1D|AI853647|Gpcr14|Htr1db	5-hydroxytryptamine (serotonin) receptor 1D	protein-coding
unique_peak2-34901-4-9--1.34538860874061-1.36011389749466	chr15	82153292	82153865	+	0	NA	Intergenic	L2c|LINE|L2	15678	NM_008669	17939	Mm.20325	NM_008669	ENSMUSG00000022453	Naga	-	N-acetyl galactosaminidase, alpha	protein-coding
common_peak1-17642-11-20--0.883623838527147-0.876666802405043	chr7	49778262	49778814	+	0	NA	Intergenic	RLTR6-int|LTR|ERV1	-75088	NM_027702	71162	Mm.158598	NM_027702	ENSMUSG00000030463	4933421I07Rik	-	RIKEN cDNA 4933421I07 gene	protein-coding
common_peak2-23310-21-30--0.384707045120639-0.446094173747089	chr15	36762209	36763152	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-35996	NM_001253806	22631	Mm.3360	NM_011740	ENSMUSG00000022285	Ywhaz	1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	protein-coding
common_peak1-17369-22-27--0.160070816970199-0.317737750275047	chr7	65470090	65471058	+	0	NA	Intergenic	Lx6|LINE|L1	-442998	NM_009728	11982	Mm.135129	NM_009728	ENSMUSG00000025324	Atp10a	Atp10c|pfatp	ATPase, class V, type 10A	protein-coding
common_peak1-12915-7-13--1.00826409175941-0.697979855752659	chr18	85383823	85384327	+	0	NA	Intergenic	Intergenic	-263159	NM_025969	67105	Mm.250617	NM_025969	ENSMUSG00000024645	Timm21	1700034H14Rik|2700002I20Rik	tranlocase of inner mitochondrial membrane 21	protein-coding
common_peak2-24366-7-9--0.522837264589173-1.05908390183068	chr17	6824823	6825228	+	0	NA	non-coding (NR_028305, exon 2 of 9).2	non-coding (NR_028305, exon 2 of 9).2	618	NR_028305	100040525	Mm.472852	NR_028305		Tmem181c-ps	100040596|ENSMUSG00000079729|ENSMUSG00000079731|Tmem181d-ps	transmembrane protein 181C, pseudogene	pseudo
common_peak1-17745-10-21--1.10301627362853-1.16735254179725	chr7	81571615	81572132	+	0	NA	intron (NM_001038643, intron 2 of 10)	intron (NM_001038643, intron 2 of 10)	127793	NM_023908	108116	Mm.425467	NM_023908	ENSMUSG00000025790	Slco3a1	5830414C08Rik|Anr1|MJAM|OATP-D|R75096|Slc21a11	solute carrier organic anion transporter family, member 3a1	protein-coding
unique_peak1-4879-8-0-3.00522241794757-2.70926996097583	chr4	28812061	28812443	+	0	NA	intron (NM_001290434, intron 5 of 16)	intron (NM_001290434, intron 5 of 16)	71957	NM_001122889	13841	Mm.257266	NM_010141	ENSMUSG00000028289	Epha7	Cek11|Ebk|Ehk3|Hek11|Mdk1	Eph receptor A7	protein-coding
common_peak1-16631-60-65-0.309897742262078-0.728895227537735	chr6	38550512	38552415	+	0	NA	intron (NM_138680, intron 8 of 9)	PB1D10|SINE|Alu	35776	NM_001033171	74253	Mm.121859	NM_001033171	ENSMUSG00000071537	Klrg2	2310020F24Rik	killer cell lectin-like receptor subfamily G, member 2	protein-coding
unique_peak2-38999-3-5--0.998945590680433-0.96108193396963	chr8	46639231	46639561	+	0	NA	intron (NM_172752, intron 1 of 22)	intron (NM_172752, intron 1 of 22)	46254	NM_001205219	234214	Mm.211096	NM_172752	ENSMUSG00000031626	Sorbs2	2010203O03Rik|9430041O17Rik|A530071H08|Argbp2|mKIAA0777	sorbin and SH3 domain containing 2	protein-coding
common_peak2-26610-51-57-0.216942830475001-0.476339052167849	chr2	115779970	115781395	+	0	NA	intron (NM_010825, intron 8 of 11)	B4A|SINE|B4	109675	NM_001159569	17536	Mm.247566	NM_010825	ENSMUSG00000027210	Meis2	A430109D20Rik|Mrg1|Stra10	Meis homeobox 2	protein-coding
common_peak2-25534-27-17-0.821620949452924-1.31432283146954	chr19	5842000	5842766	+	0	NA	TTS (NR_003513)	TTS (NR_003513)	3095	NR_003513	66961	Mm.281895	NR_003513		Neat1	2310043N10Rik|VINC	nuclear paraspeckle assembly transcript 1 (non-protein coding)	ncRNA
unique_peak1-4554-7-2-1.21412832957703-1.45399745587252	chr3	48085415	48085901	+	0	NA	Intergenic	(GA)n|Simple_repeat|Simple_repeat	-254977	NR_040408	666202	Mm.465057	NR_040408		Gm7977	EG666202	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide pseudogene	pseudo
unique_peak1-7357-14-6-1.09186123830004-1.16633110333236	chrX	19166397	19167221	+	0	NA	Intergenic	L1_Mus2|LINE|L1	-442712	NR_029807	723828		NR_029807	miRBase:MI0000710	Mir222	Mirn222|mmu-mir-222	microRNA 222	ncRNA
common_peak1-14640-13-12-0.0780323124966764-0.334470287753051	chr3	57286934	57287555	+	0	NA	intron (NM_133784, intron 3 of 6)	L1MC3|LINE|L1	57912	NM_145539	229302	Mm.26618	NM_145539	ENSMUSG00000027801	Tm4sf4	Iltmp	transmembrane 4 superfamily member 4	protein-coding
common_peak2-30610-5-6--0.511735258063458-0.947717972411649	chr7	89445384	89445801	+	0	NA	intron (NM_001277954, intron 8 of 8)	AT_rich|Low_complexity|Low_complexity	37174	NM_001277954	20408	Mm.736	NM_017400		Sh3gl3	EEN-B2|SH3P13|Sh3d2c|Sh3d2c2	SH3-domain GRB2-like 3	protein-coding
common_peak1-15137-22-18-0.399356591643819-0.549581527953406	chr3	144198305	144199288	+	0	NA	intron (NM_011828, intron 1 of 6)	RCHARR1|DNA|MER1_type	34384	NM_011828	23908	Mm.12863	NM_011828	ENSMUSG00000040151	Hs2st1	AW214369|Hs2st|mKIAA0448	heparan sulfate 2-O-sulfotransferase 1	protein-coding
common_peak2-23588-29-16-1.02482723936477-1.87578206828671	chr15	80090865	80091816	+	0	NA	3' UTR (NM_175109, exon 4 of 4)	3' UTR (NM_175109, exon 4 of 4)	3396	NM_175109	66538	Mm.39485	NM_175109	ENSMUSG00000051518	Rps19bp1	2510038A11Rik|AI604923|S19BP	ribosomal protein S19 binding protein 1	protein-coding
unique_peak2-37589-5-11--1.28934283672701-1.477227296591	chr5	39678369	39679062	+	0	NA	Intergenic	L1MA4|LINE|L1	316098	NR_045416	75095	Mm.332354	NR_045416		4930513D17Rik	-	RIKEN cDNA 4930513D17 gene	ncRNA
unique_peak2-36089-4-7--1.02346051385325-1.09384600808989	chr19	57132592	57132982	+	0	NA	intron (NM_001290813, intron 12 of 20)	intron (NM_001290813, intron 12 of 20)	-49722	NM_001177797	226250	Mm.226284	NM_146102	ENSMUSG00000025083	Afap1l2	AU041783|C86904|mKIAA1914	actin filament associated protein 1-like 2	protein-coding
common_peak2-28027-17-10-0.75886471956774-0.917676348953458	chr4	53398012	53398529	+	0	NA	Intergenic	GA-rich|Low_complexity|Low_complexity	-55015	NM_001159633	100434	Mm.482207	NM_133891	ENSMUSG00000028412	Slc44a1	2210409B22Rik|4833416H08Rik|AW547365|CHTL1|CTL1|Cdw92	solute carrier family 44, member 1	protein-coding
unique_peak1-4318-8-1-2.00522241794757-2.05605744720049	chr2	150839147	150839567	+	0	NA	Intergenic	Lx2|LINE|L1	-4223	NM_207204	78177	Mm.120911	NM_207204	ENSMUSG00000068115	Ninl	4930519N13Rik|Gm1004|Gm1634|mKIAA0980	ninein-like	protein-coding
common_peak1-8469-15-39--1.30976334433171-2.45517123152778	chr10	80148774	80149462	+	0	NA	3' UTR (NM_172457, exon 4 of 4)	3' UTR (NM_172457, exon 4 of 4)	-14397	NM_021462	17347	Mm.42126	NM_021462	ENSMUSG00000020190	Mknk2	2010016G11Rik|Gprk7|Mnk2	MAP kinase-interacting serine/threonine kinase 2	protein-coding
common_peak2-30810-28-19-0.7310310249341-1.12969433525548	chr7	127911997	127912661	+	0	NA	intron (NM_177697, intron 8 of 33)	ID4|SINE|ID	29258	NM_177697	233813	Mm.389939	NM_177697	ENSMUSG00000030889	Vwa3a	E030013G06Rik	von Willebrand factor A domain containing 3A	protein-coding
common_peak2-20072-18-12-0.612479433087259-0.739965416525508	chr1	153172522	153173042	+	0	NA	Intergenic	Intergenic	-18846	NM_001039512	117198	Mm.33764	NM_028582	ENSMUSG00000023150	Ivns1abp	1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850	influenza virus NS1A binding protein	protein-coding
common_peak1-16967-46-28-1.04001494812123-2.88669436548023	chr6	86370642	86372072	+	0	NA	intron (NM_011585, intron 6 of 12)	intron (NM_011585, intron 6 of 12)	-17035	NM_146170	232196	Mm.404040	NM_146170	ENSMUSG00000046679	C87436	-	expressed sequence C87436	protein-coding
common_peak1-10988-57-76--0.000753500615972236-0.302449268781736	chr15	35370898	35372205	+	0	NA	intron (NM_177151, intron 8 of 61)	Lx3B|LINE|L1	70250	NM_177151	666173	Mm.309250	NM_177151	ENSMUSG00000037646	Vps13b	1810042B05Rik|2310042E16Rik|4732488H20|C330002D13Rik|C87206|Coh1|D230005K13|mKIAA0532|mKIAA5032	vacuolar protein sorting 13B (yeast)	protein-coding
unique_peak1-7054-7-0-2.79909083029819-2.40823996531185	chr9	99630688	99631169	+	0	NA	Intergenic	Intergenic	-13242	NM_001194921	56492	Mm.386784	NM_019815		Cldn18	-	claudin 18	protein-coding
common_peak2-25669-56-68-0.127071368661074-0.375466836511065	chr19	10688663	10690132	+	0	NA	exon (NM_015735, exon 9 of 27)	exon (NM_015735, exon 9 of 27)	9282	NM_015735	13194	Mm.289915	NM_015735	ENSMUSG00000024740	Ddb1	127kDa|AA408517|p127-Ddb1	damage specific DNA binding protein 1	protein-coding
common_peak2-21992-10-25--1.34402437313232-1.74319850844462	chr12	54713913	54714462	+	0	NA	intron (NM_013780, intron 3 of 11)	intron (NM_013780, intron 3 of 11)	364523	NM_013780	27386	Mm.247044	NM_013780	ENSMUSG00000021010	Npas3	4930423H22Rik|bHLHe12	neuronal PAS domain protein 3	protein-coding
common_peak1-18397-8-13--0.802132504110034-0.562038191119711	chr8	71676000	71676484	+	0	NA	Intergenic	Intergenic	-11390	NM_199364	211134	Mm.479807	NM_199364	ENSMUSG00000036306	Lzts1	F37|FEZ1	leucine zipper, putative tumor suppressor 1	protein-coding
common_peak1-9564-20-15-0.488074784591193-0.590343908676236	chr11	117842879	117843875	+	0	NA	Intergenic	Intergenic	-4794	NM_133757	74451	Mm.28864	NM_133757	ENSMUSG00000017715	Pgs1	2610019F11Rik|4933424M23Rik|SAF	phosphatidylglycerophosphate synthase 1	protein-coding
unique_peak2-38225-4-6--0.830815435910851-0.989110657569874	chr6	115464393	115464853	+	0	NA	Intergenic	Lx7|LINE|L1	-30099	NM_199033	381802	Mm.291208	NM_199033	ENSMUSG00000042389	Tsen2	AU067695	tRNA splicing endonuclease 2 homolog (S. cerevisiae)	protein-coding
common_peak1-12845-83-150--0.324182114218952-0.976199660281578	chr18	73702818	73704073	+	0	NA	Intergenic	Lx8|LINE|L1	-28914	NM_001039214	240396	Mm.24131	NM_001039214	ENSMUSG00000037253	Mex3c	A130001D14Rik|BC035207|BM-013|Rkhd2	mex3 homolog C (C. elegans)	protein-coding
common_peak2-20385-8-11--0.579740082773585-1.14218153353838	chr10	19185726	19186147	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	109591	NM_053008	94222	Mm.156946	NM_053008	ENSMUSG00000045591	Olig3	Bhlhb7|bHLHe20	oligodendrocyte transcription factor 3	protein-coding
common_peak2-32211-18-34--0.816363865716615-1.09826982379496	chr9	121297254	121298239	+	0	NA	intron (NM_175114, intron 1 of 15)	intron (NM_175114, intron 1 of 15)	21670	NM_175114	67095	Mm.491112	NM_175114	ENSMUSG00000032536	Trak1	2310001H13Rik|AI413908|AI467545|hyrt|mKIAA1042	trafficking protein, kinesin binding 1	protein-coding
common_peak1-16590-15-9-0.690236655668294-0.732381977911291	chr5	148708885	148709513	+	0	NA	Intergenic	RSINE1|SINE|B4	-2821	NM_027872	71706	Mm.153218	NM_027872	ENSMUSG00000029650	Slc46a3	1200006F02Rik	solute carrier family 46, member 3	protein-coding
unique_peak1-4139-16-1-3.11826364226806-4.46429741251234	chr2	92737931	92738583	+	0	NA	Intergenic	RMER13A|LTR|ERVK	-17001	NM_030725	80976	Mm.33490	NM_030725	ENSMUSG00000027220	Syt13	5730409J20Rik|AI549909|mKIAA1427	synaptotagmin XIII	protein-coding
common_peak2-22602-15-18--0.235762762887929-0.326591483156968	chr13	74061925	74062338	+	0	NA	intron (NM_027182, intron 6 of 12)	B1_Mus1|SINE|Alu	13084	NM_027182	69716	Mm.275095	NM_027182	ENSMUSG00000021569	Trip13	2410002G23Rik|D13Ertd328e	thyroid hormone receptor interactor 13	protein-coding
unique_peak2-33193-9-10--0.269818212233077-1.05503135781948	chr10	108113264	108113869	+	0	NA	intron (NM_009306, intron 4 of 10)	intron (NM_009306, intron 4 of 10)	23650	NM_203660	368203	Mm.452758	NM_203660		Gm5136	C6.1AL|EG368203	predicted gene 5136	protein-coding
common_peak2-26810-18-12-0.612479433087259-0.739965416525508	chr2	150771119	150771733	+	0	NA	intron (NM_207204, intron 17 of 23)	intron (NM_207204, intron 17 of 23)	36096	NM_001163476	69270	Mm.271603	NM_027014	ENSMUSG00000027454	Gins1	2810418N01Rik|Gins4|PSF1|mKIAA0186	GINS complex subunit 1 (Psf1 homolog)	protein-coding
unique_peak1-6803-6-5--0.0195643903408542-0.947717972411649	chr8	70877911	70878432	+	0	NA	Intergenic	Intergenic	-14187	NR_038189	73609	Mm.443247	NR_038181	ENSMUSG00000085197	1700125H03Rik	4930510D22Rik	RIKEN cDNA 1700125H03 gene	ncRNA
common_peak1-18413-17-24--0.425559851569687-0.427564438475253	chr8	72723205	72723889	+	0	NA	intron (NM_001007570, intron 1 of 7)	intron (NM_001007570, intron 1 of 7)	12633	NM_001007570	73095	Mm.185413	NM_001007570	ENSMUSG00000002346	Slc25a42	2900084M01Rik	solute carrier family 25, member 42	protein-coding
common_peak2-31605-17-18--0.0296311752385474-0.306899554715732	chr8	122475555	122476285	+	0	NA	exon (NM_009462, exon 10 of 14)	exon (NM_009462, exon 10 of 14)	-40450	NM_030209	78892	Mm.264680	NM_030209	ENSMUSG00000031825	Crispld2	1810049K24Rik|Lcrisp2|Lgl1|coffeecrisp	cysteine-rich secretory protein LCCL domain containing 2	protein-coding
common_peak2-20975-60-77-0.0688896427582826-0.335178273031072	chr11	20830486	20831751	+	0	NA	Intergenic	Intergenic	-100007	NM_173752	216551	Mm.76694	NM_173752	ENSMUSG00000042363	Lgalsl	1110067D22Rik|A530071M23|Grpa|Hspc159|Lgalsla	lectin, galactoside binding-like	protein-coding
common_peak2-20728-29-27-0.304935158557507-0.525808162491371	chr10	99203556	99204824	+	0	NA	Intergenic	Intergenic	18102	NM_027945	71832	Mm.483162	NM_027945	ENSMUSG00000046934	Csl	1700007H16Rik	citrate synthase like	protein-coding
common_peak2-22817-15-14-0.105274154947137-0.330004445983672	chr14	17918423	17919209	+	0	NA	Intergenic	RLTR13D6|LTR|ERVK	-3971	NM_001289761	218772	Mm.259318	NM_011243	ENSMUSG00000017491	Rarb	A830025K23|Hap|Nr1b2	retinoic acid receptor, beta	protein-coding
common_peak1-11307-6-10--0.894033508256995-1.21398586181642	chr15	84232570	84233035	+	0	NA	intron (NM_001163145, intron 4 of 4)	intron (NM_001163145, intron 4 of 4)	44725	NM_001163145	72301	Mm.275387	NM_001163145	ENSMUSG00000062760	1810041L15Rik	Kiaa1644	RIKEN cDNA 1810041L15 gene	protein-coding
common_peak1-13654-43-42-0.356298430821605-0.680499470139652	chr2	26603383	26604594	+	0	NA	Intergenic	Intergenic	-77186	NM_010695	16821	Mm.123925	NM_010695	ENSMUSG00000026919	Lcn4	A630045M08Rik|Vnsp2	lipocalin 4	protein-coding
unique_peak1-6493-8-3-1.00522241794757-1.39487600375387	chr7	113240932	113241516	+	0	NA	Intergenic	Lx|LINE|L1	-18562	NR_030719	668108	Mm.429088	NR_030719		Gm8979	EG668108|Gm21884	very large inducible GTPase 1 pseudogene	pseudo
common_peak1-12709-81-99-0.228193413233841-0.627128899941155	chr18	46741097	46742555	+	0	NA	Intergenic	MMERVK10C-int|LTR|ERVK	-7639	NM_173394	225471	Mm.149280	NM_173394		Ticam2	B430113A10|TICAM-2|TRAM|Tirp|Trif	toll-like receptor adaptor molecule 2	protein-coding
common_peak2-24159-62-64-0.38838364577363-0.945872376852013	chr16	43663829	43665301	+	0	NA	promoter-TSS (NM_001146325)	promoter-TSS (NM_001146325)	-268	NM_001146325	100043314	Mm.390896	NM_001146325	ENSMUSG00000071552	Tigit	ENSMUSG00000071552|Vstm3	T cell immunoreceptor with Ig and ITIM domains	protein-coding
common_peak1-10857-34-41--0.0102488957774947-0.30364629078125	chr14	121797268	121798587	+	0	NA	Intergenic	Intergenic	-19475	NM_145465	223255	Mm.390756	NM_145465	ENSMUSG00000063410	Stk24	1810013H02Rik|C76483|MST-3|Mst3|STE20	serine/threonine kinase 24	protein-coding
common_peak1-13607-22-26--0.107603397076064-0.30528805757448	chr2	20519220	20520161	+	0	NA	intron (NM_001081006, intron 3 of 21)	MER20B|DNA|MER1_type	78550	NM_001177631	208618	Mm.237935	NM_029895	ENSMUSG00000036617	Etl4	6620402G01Rik|9430077C05Rik|BC026657|E330027G05Rik|Etl-4|Skt	enhancer trap locus 4	protein-coding
common_peak1-9466-12-15--0.351224014912361-0.332077462497413	chr11	104318863	104319422	+	0	NA	Intergenic	Intergenic	-15537	NM_001081045	76719	Mm.136418	NM_001081045	ENSMUSG00000018412	Kansl1	1700081L11Rik|9430041J06Rik|mKIAA1267	KAT8 regulatory NSL complex subunit 1	protein-coding
common_peak1-17456-18-24--0.330937038546373-0.380101753845076	chr7	19227268	19227979	+	0	NA	Intergenic	L1_Mus2|LINE|L1	14451	NM_027403	72242	Mm.326858	NM_027403	ENSMUSG00000070796	Psg21	1600019C01Rik|1600025N01Rik|1600026N13Rik|cea8	pregnancy-specific glycoprotein 21	protein-coding
unique_peak1-5467-13-6-0.971117108580164-1.01572999746118	chr5	124478523	124479248	+	0	NA	intron (NM_177876, intron 1 of 3)	intron (NM_177876, intron 1 of 3)	3384	NM_177876	330192	Mm.4079	NM_177876	ENSMUSG00000066278	Vps37b	2300007F24Rik|AI415429|BC026744	vacuolar protein sorting 37B (yeast)	protein-coding
unique_peak2-34393-9-14--0.717277189204299-0.53895475198017	chr14	27508043	27508775	+	0	NA	Intergenic	Lx7|LINE|L1	-19077	NM_178668	211948	Mm.290758	NM_178668		Pde12	2'-PDE|E430028B21Rik	phosphodiesterase 12	protein-coding
unique_peak2-34499-6-9--0.75652998450706-1.11707584880836	chr14	46704498	46704904	+	0	NA	TTS (NR_002875)	TTS (NR_002875)	999	NR_002875	218963	Mm.282093	NR_002875		Gm1821	-	ubiquitin pseudogene	pseudo
unique_peak1-6724-7-1-1.79909083029819-1.80617997398389	chr8	41553109	41553564	+	0	NA	exon (NM_178395, exon 10 of 13)	exon (NM_178395, exon 10 of 13)	43772	NM_001271543	18983	Mm.272551	NM_011135	ENSMUSG00000031601	Cnot7	AU022737|CAF-1|Caf1|Pop2	CCR4-NOT transcription complex, subunit 7	protein-coding
common_peak2-30746-17-21--0.24113528043226-0.322753776620787	chr7	118929330	118930265	+	0	NA	Intergenic	Intergenic	-6306	NM_173739	233733	Mm.323322	NM_173739	ENSMUSG00000038296	Galnt18	2900011G21Rik|BC024988|Galntl4	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 18	protein-coding
common_peak2-25834-48-56-0.138037137070073-0.390495201889466	chr19	40830887	40832043	+	0	NA	Intergenic	Intergenic	-74304	NM_172839	240665	Mm.309	NM_172839	ENSMUSG00000025010	Ccnj	D430039C20Rik	cyclin J	protein-coding
unique_peak2-32472-7-10--0.660340788339108-1.12966497611638	chr1	31019151	31019686	+	0	NA	Intergenic	L1Md_A|LINE|L1	-12818	NM_011200	19243	Mm.491181	NM_011200	ENSMUSG00000026064	Ptp4a1	AA415290|AU019864|C130021B01|Prl-1	protein tyrosine phosphatase 4a1	protein-coding
common_peak1-11523-19-23--0.18227517405947-0.320777457303847	chr16	97763265	97764156	+	0	NA	intron (NR_003508, intron 2 of 13)	L1MEc|LINE|L1	6020	NM_013606	17858	Mm.14157	NM_013606	ENSMUSG00000023341	Mx2	AI528743|Mx-2	MX dynamin-like GTPase 2	protein-coding
unique_peak2-34697-5-7--0.704380336005853-1.01466476204226	chr15	25950898	25951405	+	0	NA	Intergenic	Intergenic	37030	NM_144523	52521	Mm.29145	NM_144523	ENSMUSG00000052253	Zfp622	1110033B05Rik|D15Ertd806e|ZPR9|Znf622	zinc finger protein 622	protein-coding
common_peak2-31787-10-6-0.549060422951165-1.21398586181642	chr9	32595076	32595553	+	0	NA	Intergenic	Intergenic	91687	NM_001038642	23871	Mm.292415	NM_011808	ENSMUSG00000032035	Ets1	AI196000|AI448617|D230050P06|Ets-1|Tpl1	E26 avian leukemia oncogene 1, 5' domain	protein-coding
common_peak2-27378-42-24-1.09847313809246-2.87232347911589	chr3	87115657	87116367	+	0	NA	Intergenic	Intergenic	-45791	NM_009690	11801	Mm.6676	NM_009690	ENSMUSG00000015854	Cd5l	1/6|AAC-11|AI047839|Api6|CT2|Pdp|Sp-alpha	CD5 antigen-like	protein-coding
common_peak2-24291-43-74--0.446255504972178-0.910921989990114	chr17	12991724	12993128	+	0	NA	intron (NR_027784, intron 2 of 2)	intron (NR_027784, intron 2 of 2)	-29854	NM_010515	16004	Mm.26553	NM_010515	ENSMUSG00000023830	Igf2r	AI661837|CD222|CI-MPR|M6P/IGF2R|Mpr300	insulin-like growth factor 2 receptor	protein-coding
common_peak2-23088-11-8-0.338768582809301-1.14218153353838	chr14	76479093	76479401	+	0	NA	Intergenic	Intergenic	31375	NM_026177	67467	Mm.260767	NM_026177	ENSMUSG00000022008	Gpalpp1	1200011I18Rik|Kiaa1704	GPALPP motifs containing 1	protein-coding
common_peak1-10979-46-96--0.701916898938326-2.12138537076617	chr15	31530203	31531741	+	0	NA	promoter-TSS (NM_026546)	promoter-TSS (NM_026546)	587	NM_007637	12465	Mm.282158	NM_007637	ENSMUSG00000022234	Cct5	Ccte|TCPE|mKIAA0098	chaperonin containing Tcp1, subunit 5 (epsilon)	protein-coding
common_peak1-14057-11-10-0.0492619656143161-0.31137425193576	chr2	119547046	119547599	+	0	NA	intron (NM_030112, intron 8 of 17)	B1F2|SINE|Alu	-20751	NM_146125	228550	Mm.65337	NM_146125	ENSMUSG00000027296	Itpka	-	inositol 1,4,5-trisphosphate 3-kinase A	protein-coding
common_peak2-29931-9-8-0.0196884049619079-1.03275496310833	chr6	115524452	115524943	+	0	NA	intron (NM_199033, intron 9 of 11)	MT2B2|LTR|ERVL	17897	NM_001101431	70291	Mm.133694	NM_001101431		Mkrn2os	2510049J12Rik	makorin, ring finger protein 2, opposite strand	protein-coding
common_peak2-28585-56-109--0.545763888085417-1.67315279398724	chr5	15934043	15935499	+	0	NA	Intergenic	AT_rich|Low_complexity|Low_complexity	-124542	NM_001289460	15234	Mm.267078	NM_010427	ENSMUSG00000028864	Hgf	C230052L06Rik|HGF/SF|NK1|NK2|SF|SF/HGF	hepatocyte growth factor	protein-coding
unique_peak2-32457-1-17--3.79698201165906-4.46429741251234	chr1	12644566	12644922	+	0	NA	Intergenic	Intergenic	-12900	NR_045297	329096	Mm.417782	NR_045297	ENSMUSG00000097171	Gm17644	4932411L15	predicted gene, 17644	ncRNA
unique_peak2-33121-2-16--3.00491709751366-3.53487848679804	chr10	81429721	81430467	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-36869	NM_199062	331188	Mm.351497	NM_199062		Zfp781	A130081B01	zinc finger protein 781	protein-coding
common_peak2-26427-62-67-0.323288617551746-0.764984435653934	chr2	61593051	61594305	+	0	NA	intron (NM_021526, intron 3 of 11)	B1_Mur4|SINE|Alu	43927	NM_021526	59029	Mm.218198	NM_021526	ENSMUSG00000026914	Psmd14	2610312C03Rik|3200001M20Rik|AA986732|Pad1|Poh1|rpm11	proteasome (prosome, macropain) 26S subunit, non-ATPase, 14	protein-coding
common_peak1-13740-12-19--0.673152109799724-0.546772548767014	chr2	32524809	32525395	+	0	NA	intron (NM_001146350, intron 3 of 13)	intron (NM_001146350, intron 3 of 13)	18184	NR_106168	102465885		NR_106168		Mir8093	mmu-mir-8093	microRNA mir-8093	ncRNA
common_peak1-16257-9-14--0.717277189204299-0.53895475198017	chr5	105731821	105732491	+	0	NA	Intergenic	Intergenic	-9438	NM_194336	100702	Mm.491210	NM_194336	ENSMUSG00000079362	Gbp6	AI595338|Mpa2l	guanylate binding protein 6	protein-coding
common_peak1-8854-37-15-1.52599307148582-3.88696893869767	chr11	31807423	31809196	+	0	NA	intron (NM_001290678, intron 2 of 7)	intron (NM_001290678, intron 2 of 7)	37369	NM_026252	67579	Mm.339792	NM_026252	ENSMUSG00000020300	Cpeb4	Cpe-bp4|Cpeb-4|mCPEB-4	cytoplasmic polyadenylation element binding protein 4	protein-coding
unique_peak1-923-6-0-2.5653981103803-2.10720996964787	chr11	50452864	50453383	+	0	NA	intron (NM_175643, intron 2 of 21)	intron (NM_175643, intron 2 of 21)	37536	NM_175643	216725	Mm.110597	NM_175643	ENSMUSG00000036545	Adamts2	ADAM-TS2|ADAMTS-2|ADAMTS-3|PCINP|hPCPNI|mKIAA4060|pNPI	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 2	protein-coding
unique_peak2-34410-0-6--3.64748585253182-1.56314192529759	chr14	9285027	9285458	+	0	NA	intron (NM_028934, intron 14 of 15)	L1MA4A|LINE|L1	-73965	NM_146050	18300	Mm.25351	NM_146050	ENSMUSG00000021749	Oit1	2310076N21Rik|AV067083|EF-7|Fam3d	oncoprotein induced transcript 1	protein-coding
common_peak2-31779-6-14--1.34149248522822-1.01572999746118	chr9	24502728	24503295	+	0	NA	Intergenic	Intergenic	-2274	NM_001166207	320752	Mm.46158	NM_001166207	ENSMUSG00000085576	Dpy19l2	4932443J21Rik|Gm18376	dpy-19-like 2 (C. elegans)	protein-coding
common_peak2-29164-53-100--0.517238470335866-1.37416713620078	chr5	130254557	130255663	+	0	NA	intron (NM_008095, intron 7 of 9)	intron (NM_008095, intron 7 of 9)	24160	NM_008095	14467	Mm.12468	NM_008095	ENSMUSG00000029432	Gbas	AV006093|Nipsnap2	glioblastoma amplified sequence	protein-coding
common_peak1-18120-9-13--0.617741515653384-0.459837087125828	chr8	4612559	4613105	+	0	NA	promoter-TSS (NM_145591)	promoter-TSS (NM_145591)	-338	NM_145591	233987	Mm.102799	NM_145591		Zfp958	-	zinc finger protein 958	protein-coding
common_peak2-28317-11-11--0.0762689164695427-0.301029995663976	chr4	133584291	133584826	+	0	NA	Intergenic	B3A|SINE|B2	-9827	NM_145833	83557	Mm.302567	NM_145833	ENSMUSG00000050966	Lin28a	AL024421|ENSMUSG00000070700|Gm10299|Lin-28|Lin28|Tex17|lin-28A	lin-28 homolog A (C. elegans)	protein-coding
common_peak1-12610-9-15--0.81038659359578-0.630231561310125	chr18	30272767	30273188	+	0	NA	Intergenic	Intergenic	-159573	NM_181414	225326	Mm.194127	NM_181414	ENSMUSG00000033628	Pik3c3	5330434F23Rik|Vps34	phosphoinositide-3-kinase, class 3	protein-coding
common_peak2-23158-6-5--0.0195643903408542-0.947717972411649	chr14	121053195	121053618	+	0	NA	Intergenic	MLT1E2|LTR|MaLR	175723	NM_029519	76108	Mm.261448	NM_029519	ENSMUSG00000051615	Rap2a	5830461H18Rik	RAS related protein 2a	protein-coding
common_peak2-22318-10-31--1.64358465499123-2.75133420124051	chr13	21810357	21811106	+	0	NA	TTS (NM_178206)	TTS (NM_178206)	1234	NM_178206	319152	Mm.377874	NM_178206	ENSMUSG00000069312	Hist1h3h	H3-291	histone cluster 1, H3h	protein-coding
unique_peak1-2499-10-3-1.35641534500877-1.75805390616669	chr16	13047215	13047679	+	0	NA	Intergenic	ID_B1|SINE|B4	-62382	NM_015769	50505	Mm.287837	NM_015769		Ercc4	AI606920|Xpf	excision repair cross-complementing rodent repair deficiency, complementation group 4	protein-coding
common_peak2-21900-55-108--0.563564453624224-1.68840944590783	chr12	4916901	4918386	+	0	NA	Intergenic	Intergenic	-3317	NM_145441	217379	Mm.259170	NM_145441	ENSMUSG00000020634	Ubxn2a	6330407P03Rik|Ubxd4	UBX domain protein 2A	protein-coding
unique_peak1-5466-13-4-1.45654393575041-2.23384849113406	chr5	123692876	123693645	+	0	NA	intron (NM_026000, intron 4 of 5)	URR1B|DNA|MER1_type	15061	NM_026000	67151	Mm.278997	NM_026000	ENSMUSG00000029440	Psmd9	1500011J20Rik|2610202L11Rik|Bridge-1|P27	proteasome (prosome, macropain) 26S subunit, non-ATPase, 9	protein-coding
common_peak2-20016-41-37-0.453221191405075-0.852626677849445	chr1	135534812	135536445	+	0	NA	exon (NM_144530, exon 6 of 17)	exon (NM_144530, exon 6 of 17)	21834	NM_001166552	667118	Mm.245357	NM_001166552		Zbed6	Gm8466|MGR	zinc finger, BED domain containing 6	protein-coding
unique_peak2-39351-10-14--0.550475250599749-0.446472590016315	chr9	120126773	120127516	+	0	NA	Intergenic	Intergenic	68284	NM_001039364	17433	Mm.486167	NM_008614	ENSMUSG00000032517	Mobp	AI835053|AI839848|MOBP155|MOBP170|MOBP69|MOBP73|MOBP81|R74645	myelin-associated oligodendrocytic basic protein	protein-coding
common_peak2-27917-32-58--0.603551030142182-1.11442465192823	chr4	11006770	11007655	+	0	NA	Intergenic	IAPEY2_LTR|LTR|ERVK	-3860	NM_001085493	76947	Mm.275265	NM_001085493	ENSMUSG00000050323	Ndufaf6	2310030N02Rik	NADH dehydrogenase (ubiquinone) complex I, assembly factor 6	protein-coding
common_peak2-30843-41-64--0.321219108179794-0.571074946341596	chr7	133121570	133123353	+	0	NA	intron (NM_001101488, intron 2 of 6)	intron (NM_001101488, intron 2 of 6)	103464	NM_001101488	269994	Mm.39599	NM_001101488	ENSMUSG00000046182	Gsg1l	AI852434|C230098I05Rik|G630023A01Rik|Gm637|g1l	GSG1-like	protein-coding
common_peak2-30423-18-15-0.312919151228352-0.456667090758524	chr7	42505069	42505777	+	0	NA	Intergenic	Intergenic	-3192211	NM_001013810	434171	Mm.60990	NM_001013810	ENSMUSG00000060565	Gm5591	EG434171	predicted gene 5591	protein-coding
unique_peak2-32960-6-12--1.13504160776079-1.45089835786865	chr10	43976985	43977446	+	0	NA	Intergenic	MYSERV6-int|LTR|ERVK	-10949	NM_053069	11793	Mm.22264	NM_053069	ENSMUSG00000038160	Atg5	2010107M05Rik|3110067M24Rik|AW319544|Apg5l|Atg5l|C88337|Paddy	autophagy related 5	protein-coding
unique_peak1-5201-8-1-2.00522241794757-2.05605744720049	chr5	35040651	35041167	+	0	NA	intron (NM_019497, intron 5 of 15)	intron (NM_019497, intron 5 of 15)	37881	NM_019497	14772	Mm.117076	NM_019497	ENSMUSG00000052783	Grk4	A830025H08Rik|GRK|Gprk2l|Gprk4	G protein-coupled receptor kinase 4	protein-coding
unique_peak2-34708-6-22--1.95816384567671-2.41165147706372	chr15	32246191	32246832	+	0	NA	intron (NM_009154, intron 1 of 22)	intron (NM_009154, intron 1 of 22)	71943	NM_009154	20356	Mm.260374	NM_009154	ENSMUSG00000022231	Sema5a	5930434A13|9130201M22Rik|AI464145|Semaf|semF	sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A	protein-coding
common_peak1-18578-45-58--0.0222850240169699-0.301029995663982	chr8	105965250	105966367	+	0	NA	Intergenic	Intergenic	-94374	NR_036588	69794	Mm.396139	NR_036588		1600027J07Rik	-	RIKEN cDNA 1600027J07 gene	ncRNA
common_peak1-15725-22-14-0.740393509478886-0.983972868822056	chr4	141569040	141570144	+	0	NA	Intergenic	Intergenic	-2026	NM_177868	329977	Mm.252019	NM_028429	ENSMUSG00000051435	Fhad1	2900090M10Rik|B230311F11	forkhead-associated (FHA) phosphopeptide binding domain 1	protein-coding
common_peak2-21036-19-7-1.40268732666169-1.89173646618542	chr11	33661227	33661721	+	0	NA	intron (NM_001190885, intron 1 of 8)	intron (NM_001190885, intron 1 of 8)	82111	NM_027398	70357	Mm.252514	NM_027398	ENSMUSG00000053519	Kcnip1	KCHIP1|Kchip1.2	Kv channel-interacting protein 1	protein-coding
unique_peak2-34560-8-11--0.579740082773585-1.14218153353838	chr14	65342838	65343663	+	0	NA	intron (NM_001081177, intron 7 of 39)	B1F1|SINE|Alu	71882	NM_001081177	16554	Mm.23611	NM_001081177	ENSMUSG00000060012	Kif13b	5330429L19Rik|6030414C01|AI429803|C130021D12Rik|GAKIN	kinesin family member 13B	protein-coding
unique_peak2-37408-6-6--0.241956811677302-0.947717972411649	chr4	145279329	145279744	+	0	NA	intron (NM_001103158, intron 2 of 4)	intron (NM_001103158, intron 2 of 4)	18936	NM_001103158	100041379	Mm.276881	NM_001103158	ENSMUSG00000058186	Gm13242	OTTMUSG00000011070	predicted gene 13242	protein-coding
common_peak1-16535-10-14--0.550475250599749-0.446472590016315	chr5	142959238	142959741	+	0	NA	Intergenic	Intergenic	19604	NM_172725	231855	Mm.78250	NM_172725	ENSMUSG00000039623	Ap5z1	C330006K01Rik	adaptor-related protein complex 5, zeta 1 subunit	protein-coding
common_peak2-29999-22-18-0.399356591643819-0.549581527953406	chr6	124662184	124662999	+	0	NA	promoter-TSS (NM_013536)	promoter-TSS (NM_013536)	284	NM_007531	12034	Mm.36241	NM_007531	ENSMUSG00000004264	Phb2	AU044498|BAP|Bap37|Bcap37|REA	prohibitin 2	protein-coding
unique_peak1-5050-12-6-0.841421063030034-1.58711810488664	chr4	135273062	135273766	+	0	NA	Intergenic	RMER1B|Other|Other	-10660	NM_178257	230828	Mm.261647	NM_178257		Il22ra1	9130219A07Rik|ENSMUSG00000073746|IL-22R|Il22r	interleukin 22 receptor, alpha 1	protein-coding
unique_peak1-189-13-1-2.77847203063777-3.64038867156802	chr1	77490048	77490688	+	0	NA	intron (NM_007936, intron 3 of 17)	intron (NM_007936, intron 3 of 17)	2975	NR_105770	102465180		NR_105770		Mir6352	mmu-mir-6352	microRNA mir-6352	ncRNA
common_peak2-31681-11-5-0.923731083530457-1.477227296591	chr8	126867300	126867690	+	0	NA	3' UTR (NM_139272, exon 16 of 16)	3' UTR (NM_139272, exon 16 of 16)	90341	NM_171824	209966	Mm.234233	NM_171824	ENSMUSG00000050751	Pgbd5	2900019M05Rik|AI854313	piggyBac transposable element derived 5	protein-coding
common_peak1-18273-12-8-0.478850983645327-0.562038191119709	chr8	35432195	35432812	+	0	NA	Intergenic	Lx8|LINE|L1	-202737	NR_105820	102465211		NR_105820	miRBase:MI0021930	Mir6395	mmu-mir-6395	microRNA mir-6395	ncRNA
unique_peak1-4168-8-0-3.00522241794757-2.70926996097583	chr2	109476730	109477199	+	0	NA	Intergenic	Intergenic	-37893	NM_007540	12064	Mm.1442	NM_007540	ENSMUSG00000048482	Bdnf	-	brain derived neurotrophic factor	protein-coding
common_peak2-21348-79-121--0.101902170386267-0.346314203489899	chr11	77686439	77687843	+	0	NA	Intergenic	Intergenic	20233	NM_008952	19193	Mm.8543	NM_008952	ENSMUSG00000017453	Pipox	LPIPOX|Pso	pipecolic acid oxidase	protein-coding
common_peak1-7658-37-45-0.0024311154288057-0.303416277109641	chr1	74386490	74387968	+	0	NA	intron (NM_019999, intron 1 of 8)	intron (NM_019999, intron 1 of 8)	8045	NM_019999	56695	Mm.384726	NM_019999	ENSMUSG00000026179	Pnkd	2210013N15Rik|2810403H05Rik|AI854243|Brp17|MNCb-5687|MR-1|Tahccp2	paroxysmal nonkinesiogenic dyskinesia	protein-coding
common_peak1-16953-23-14-0.814876908900562-1.09492971584134	chr6	84320086	84321233	+	0	NA	Intergenic	Intergenic	53173	NR_046063	100038556	Mm.387783	NR_046063		Gm10445	ENSMUSG00000072956	predicted gene 10445	ncRNA
common_peak1-19174-8-18--1.24270509549601-1.15812782348128	chr9	96781618	96781980	+	0	NA	intron (NM_001289645, intron 1 of 6)	intron (NM_001289645, intron 1 of 6)	8094	NM_001289646	235534	Mm.233031	NM_153420	ENSMUSG00000043587	Pxylp1	9430094M07Rik|Acpl2|BB177120|C130099A20Rik	2-phosphoxylose phosphatase 1	protein-coding
common_peak1-9765-24-35--0.376715098674596-0.470271536760928	chr12	55080179	55081026	+	0	NA	intron (NM_013780, intron 6 of 11)	intron (NM_013780, intron 6 of 11)	224259	NM_028133	112407	Mm.133037	NM_028133	ENSMUSG00000035105	Egln3	2610021G09Rik|AI505553|AI648162|Hif-p4h-3|Phd3|SM-20	egl-9 family hypoxia-inducible factor 3	protein-coding
common_peak2-23434-7-9--0.522837264589173-1.05908390183068	chr15	62128647	62128942	+	0	NA	Intergenic	Intergenic	-77788	NR_003523	67552	Mm.484027	NM_026230		H2afy3	4933432H23Rik	H2A histone family, member Y3	pseudo
common_peak2-30070-54-72--0.0167387972502837-0.301029995663963	chr6	129532882	129534229	+	0	NA	intron (NM_153590, intron 5 of 6)	ID_B1|SINE|B4	5251	NM_153590	243655	Mm.30968	NM_153590	ENSMUSG00000050241	Klre1	Klre-1|NKG2I	killer cell lectin-like receptor family E member 1	protein-coding
unique_peak1-7370-7-1-1.79909083029819-1.80617997398389	chrX	53159406	53159915	+	0	NA	Intergenic	L1VL2|LINE|L1	-230089	NM_027510	70691	Mm.335676	NM_027510	ENSMUSG00000031125	3830403N18Rik	Xlrl	RIKEN cDNA 3830403N18 gene	protein-coding
unique_peak1-5714-10-4-1.03448725012141-1.5150158574804	chr6	38992174	38992704	+	0	NA	intron (NM_011539, intron 9 of 12)	ORR1E|LTR|MaLR	25146	NR_040523	69986	Mm.490941	NR_040523		1700025N23Rik	-	RIKEN cDNA 1700025N23 gene	ncRNA
unique_peak1-1304-16-8-0.948338640825749-1.02063122982878	chr11	120254316	120255072	+	0	NA	intron (NM_199469, intron 12 of 15)	intron (NM_199469, intron 12 of 15)	-14634	NM_027980	71885	Mm.274890	NM_027980	ENSMUSG00000025384	2310003H01Rik	Faap100	RIKEN cDNA 2310003H01 gene	protein-coding
common_peak2-24984-38-65--0.472941460059923-0.858502967881228	chr18	9449261	9450157	+	0	NA	5' UTR (NM_026484, exon 1 of 10)	5' UTR (NM_026484, exon 1 of 10)	439	NM_026484	67974	Mm.86523	NM_026484	ENSMUSG00000024286	Ccny	1700025H17Rik|3110050L10Rik|4631402G10Rik|5730405I09Rik	cyclin Y	protein-coding
common_peak2-23186-16-11-0.533301141546906-0.58239619684445	chr15	75988792	75989357	+	0	NA	Intergenic	Intergenic	-32088	NM_001142968	271278	Mm.205253	NM_198172	ENSMUSG00000044361	BC024139	6230424I18Rik	cDNA sequence BC024139	protein-coding
unique_peak1-2467-23-1-3.72176750450908-6.57132529354008	chr16	49839441	49840642	+	0	NA	Intergenic	Intergenic	-15726	NM_010581	16423	Mm.31752	NM_010581	ENSMUSG00000055447	Cd47	9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp	CD47 antigen (Rh-related antigen, integrin-associated signal transducer)	protein-coding
unique_peak2-38785-6-8--0.60452689106201-1.03789460276074	chr7	128318719	128319214	+	0	NA	Intergenic	L1MB7|LINE|L1	92014	NM_139310	246190	Mm.221073	NM_139310	ENSMUSG00000034990	Otoa	-	otoancorin	protein-coding
unique_peak1-2567-9-0-3.18961340640422-3.01029995663981	chr16	25434586	25435015	+	0	NA	Intergenic	Lx9|LINE|L1	147897	NM_175165	71338	Mm.126851	NM_175165	ENSMUSG00000048399	Tprg	5430420C16Rik|Tprg1	transformation related protein 63 regulated	protein-coding
common_peak1-18754-103-128-0.276770490436786-0.901453649099037	chr8	126591068	126593693	+	0	NA	Intergenic	Intergenic	45007	NM_001029876	382038	Mm.334891	NM_001029876	ENSMUSG00000031976	Urb2	C77575|mKIAA0133	URB2 ribosome biogenesis 2 homolog (S. cerevisiae)	protein-coding
common_peak2-25899-114-112-0.64377555929318-3.50290887101224	chr19	45659196	45660780	+	0	NA	intron (NM_013907, intron 6 of 8)	intron (NM_013907, intron 6 of 8)	24883	NM_172639	226162	Mm.21978	NM_172639	ENSMUSG00000041035	Dpcd	5330431N19Rik|Ndac	deleted in primary ciliary dyskinesia	protein-coding
common_peak2-24999-29-47--0.472672420106045-0.683734619884041	chr18	11839006	11840533	+	0	NA	intron (NR_045526, intron 4 of 17)	L1VL2|LINE|L1	23911	NM_001081223	225182	Mm.154275	NM_175458	ENSMUSG00000041238	Rbbp8	9930104E21Rik|CtIP|RBBP-8|RIM|SAE2	retinoblastoma binding protein 8	protein-coding
common_peak2-28160-26-22-0.404337136101449-0.569352520859861	chr4	107367718	107368321	+	0	NA	Intergenic	L2c|LINE|L2	-11252	NM_019872	56296	Mm.141324	NM_019872	ENSMUSG00000028610	Dmrtb1	Dmrt6|Prp13	DMRT-like family B with proline-rich C-terminal, 1	protein-coding
common_peak2-30012-16-6-1.31090872021046-1.49151883326344	chr6	124926097	124926438	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-10720	NM_001164089	26894	Mm.244536	NM_012003	ENSMUSG00000030127	Cops7a	D6Ertd35e	COP9 (constitutive photomorphogenic) homolog, subunit 7a (Arabidopsis thaliana)	protein-coding
common_peak2-20818-19-21--0.0567442919756109-0.301029995663971	chr10	128083242	128083996	+	0	NA	promoter-TSS (NM_011772)	promoter-TSS (NM_011772)	-570	NM_011772	22781	Mm.358648	NM_011772	ENSMUSG00000002578	Ikzf4	A630026H08Rik|Eos|Zfpn1a4|Znfn1a4	IKAROS family zinc finger 4	protein-coding
unique_peak2-34187-9-9--0.132314688483142-1.03275496310833	chr13	36702409	36702984	+	0	NA	Intergenic	Intergenic	123650	NM_153529	68404	Mm.232930	NM_153529	ENSMUSG00000039114	Nrn1	0710008J23Rik|Cpg15|Nrn	neuritin 1	protein-coding
common_peak2-24165-17-26--0.53659116395843-0.538442145997695	chr16	45038150	45038841	+	0	NA	Intergenic	MLT2B2|LTR|ERVL	-55671	NM_026439	67896	Mm.181074	NM_026439	ENSMUSG00000022665	Ccdc80	2610001E17Rik|DRO1|Ssg1|Urb	coiled-coil domain containing 80	protein-coding
common_peak2-21536-27-14-1.08465535528672-1.87214134458703	chr11	95776748	95777360	+	0	NA	promoter-TSS (NM_008081)	promoter-TSS (NM_008081)	-869	NM_008081	14422	Mm.340702	NM_008081		B4galnt2	AI593864|Dlb-1|Dlb1|Galg2|Galgt2|Ggm3|Igf2bp1	beta-1,4-N-acetyl-galactosaminyl transferase 2	protein-coding
common_peak1-17255-137-156-0.488413950664135-2.67810579670182	chr6	133104851	133106073	+	0	NA	Intergenic	L1_Mus1|LINE|L1	50205	NR_073368	381820	Mm.291762	NM_001163445	ENSMUSG00000072704	2700089E24Rik	AI662692	RIKEN cDNA 2700089E24 gene	protein-coding
unique_peak1-3497-21-4-2.24756117037887-3.74275476306371	chr19	12471846	12472685	+	0	NA	Intergenic	RMER15-int|LTR|ERVL	3510	NM_146684	258679	Mm.271520	NM_146684	ENSMUSG00000046650	Olfr1440	MOR215-1	olfactory receptor 1440	protein-coding
common_peak1-12534-29-30-0.158093770228236-0.384630725886669	chr18	84950763	84951650	+	0	NA	Intergenic	Intergenic	61572	NM_173770	240479	Mm.472378	NM_173770	ENSMUSG00000047992	Fam69c	B230399E16Rik	family with sequence similarity 69, member C	protein-coding
common_peak1-7585-36-35-0.309396084725442-0.573175361577103	chr1	54438209	54439381	+	0	NA	Intergenic	Lx9|LINE|L1	57020	NM_001033194	98488	Mm.25856	NM_001033194	ENSMUSG00000041303	Gtf3c3	AL022818|TF3C-gamma|TFIIIC102	general transcription factor IIIC, polypeptide 3	protein-coding
common_peak2-23854-28-16-0.965496278571123-1.60877160026697	chr15	102102720	102103533	+	0	NA	Intergenic	PB1D10|SINE|Alu	-6761	NM_134100	106073	Mm.287740	NM_134100	ENSMUSG00000045665	Mfsd5	AA409375|AW556797|D15Mgi27	major facilitator superfamily domain containing 5	protein-coding
common_peak2-20811-52-115--0.749721004861873-2.82490866561777	chr10	127380053	127381433	+	0	NA	Intergenic	Intergenic	45152	NM_027301	70061	Mm.158320	NM_027301	ENSMUSG00000040127	Sdr9c7	1810054F20Rik|Rdh20|Rdhs|SDR-O|Sdro	4short chain dehydrogenase/reductase family 9C, member 7	protein-coding
common_peak2-22988-35-37-0.183442745018919-0.398838069828027	chr14	56886601	56887496	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-5951	NM_013542	14939	Mm.14874	NM_013542	ENSMUSG00000015437	Gzmb	AI553453|CCP-1/C11|CCP1|Ctla-1|Ctla1|GZB	granzyme B	protein-coding
unique_peak2-38976-1-9--2.94898510510411-2.31132995230379	chr8	36137334	36137769	+	0	NA	Intergenic	Intergenic	-108807	NM_175091	21951	Mm.88364	NM_175091	ENSMUSG00000031529	Tnks	4930554K12Rik|AI662855|ARTD5|C86528|D130072O21Rik|TANK1|mTNKS1	tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase	protein-coding
unique_peak1-7405-20-6-1.68071986253359-2.41165147706372	chrX	126767904	126768769	+	0	NA	intron (NM_172493, intron 23 of 26)	intron (NM_172493, intron 23 of 26)	484058	NM_172493	54004	Mm.10763	NM_017398	ENSMUSG00000034480	Diap2	Dia3|Diaph2|Drf2|E430022I22Rik	diaphanous homolog 2 (Drosophila)	protein-coding
common_peak1-18751-65-66-0.426076749019355-1.10599757125155	chr8	126538751	126540793	+	0	NA	intron (NM_133966, intron 1 of 4)	intron (NM_133966, intron 1 of 4)	5437	NM_133966	102162	Mm.291777	NM_133966	ENSMUSG00000038697	Taf5l	1110005N04Rik|AI849020	TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor	protein-coding
unique_peak2-38805-9-15--0.81038659359578-0.630231561310125	chr7	132858942	132859722	+	0	NA	intron (NM_001081022, intron 1 of 27)	intron (NM_001081022, intron 1 of 27)	7942	NM_001081022	233865	Mm.274389	NM_001081022	ENSMUSG00000032743	D430042O09Rik	Kiaa0556	RIKEN cDNA D430042O09 gene	protein-coding
common_peak2-21141-13-23--0.806490470083387-0.781208772652439	chr11	54955767	54956362	+	0	NA	intron (NM_172258, intron 5 of 10)	B3A|SINE|B2	9144	NM_172258	215332	Mm.87054	NM_172258	ENSMUSG00000049491	Slc36a3	PAT3|TRAMD2|tramdorin2	solute carrier family 36 (proton/amino acid symporter), member 3	protein-coding
common_peak1-7455-128-136-0.566973919117549-3.19548806964057	chr1	86441480	86443745	+	0	NA	Intergenic	Intergenic	1052773	NM_030194	109032	Mm.335802	NM_030194	ENSMUSG00000070034	Sp110	5031415C07Rik|52kDa|5830484A20Rik|ENSMUSG00000075603|Ifi75|Ipr1	Sp110 nuclear body protein	protein-coding
common_peak2-26466-12-7-0.648775985087639-0.697979855752659	chr2	76648463	76649056	+	0	NA	exon (NM_028004, exon 62 of 192)	exon (NM_028004, exon 62 of 192)	135387	NM_031256	83435	Mm.41636	NM_031256	ENSMUSG00000002733	Plekha3	FAPP1	pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 3	protein-coding
unique_peak1-2184-7-0-2.79909083029819-2.40823996531185	chr15	63343820	63344227	+	0	NA	Intergenic	Lx4B|LINE|L1	-32860	NR_045279	432958	Mm.255105	NR_045279		Gm20740	-	predicted gene, 20740	ncRNA
common_peak1-11055-49-11-2.42132132230403-9.29952278779432	chr15	55120473	55121717	+	0	NA	Intergenic	Intergenic	-18210	NM_181277	12818	Mm.297859	NM_181277	ENSMUSG00000022371	Col14a1	5730412L22Rik|AW108078	collagen, type XIV, alpha 1	protein-coding
unique_peak1-5986-21-8-1.39956426382392-2.11898024768848	chr6	98848698	98849635	+	0	NA	Intergenic	Intergenic	129126	NM_001197322	108655	Mm.234965	NM_053202	ENSMUSG00000030067	Foxp1	3110052D19Rik|4932443N09Rik|AI461938|AW494214	forkhead box P1	protein-coding
common_peak2-22254-32-50--0.393333322751835-0.597008909195482	chr13	3610224	3611311	+	0	NA	promoter-TSS (NM_134063)	promoter-TSS (NM_134063)	-413	NM_134063	105203	Mm.221609	NM_134063	ENSMUSG00000033799	Fam208b	AI645998|Pap20|mKIAA2006	family with sequence similarity 208, member B	protein-coding
common_peak2-20672-24-52--0.934710551795482-1.8888294360187	chr10	85184270	85185621	+	0	NA	Intergenic	B2_Mm1a|SINE|B2	123789	NM_001017525	74007	Mm.36544	NM_028709	ENSMUSG00000020042	Btbd11	6330404E16Rik	BTB (POZ) domain containing 11	protein-coding
common_peak2-30855-92-140--0.047199268696029-0.313618682225665	chr7	138845818	138847277	+	0	NA	Intergenic	Intergenic	142642	NM_009774	12237	Mm.927	NM_009774	ENSMUSG00000066979	Bub3	AU019800|AU021329|AU043350|AW146323|C78067	budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae)	protein-coding
unique_peak2-33824-2-8--2.08737925770563-1.65811743852845	chr12	8070360	8070843	+	0	NA	Intergenic	Intergenic	86118	NM_009693	238055	Mm.221239	NM_009693	ENSMUSG00000020609	Apob	AI315052|Apo B-100|apob-100|apob-48	apolipoprotein B	protein-coding
common_peak1-9181-13-18--0.469455482805817-0.409888142029227	chr11	78412248	78412900	+	0	NA	intron (NM_008702, intron 3 of 10)	intron (NM_008702, intron 3 of 10)	-48337	NM_133706	69071	Mm.29431	NM_133706	ENSMUSG00000037278	Tmem97	1810014L12Rik|AI115531|AL022956|D11Bhm182e	transmembrane protein 97	protein-coding
common_peak1-15239-8-5-0.420259917226415-1.10484139239135	chr4	8510168	8510701	+	0	NA	intron (NM_021518, intron 6 of 7)	ORR1A3|LTR|MaLR	47643	NM_021518	59021	Mm.397471	NM_021518	ENSMUSG00000047187	Rab2a	9330148M11Rik|C80220|Rab2	RAB2A, member RAS oncogene family	protein-coding
common_peak1-18557-27-19-0.669617856007873-1.02859851787301	chr8	104436175	104437081	+	0	NA	Intergenic	Intergenic	872383	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
unique_peak2-36254-3-8--1.58390809140159-1.39487600375387	chr2	52320337	52320781	+	0	NA	intron (NM_001285427, intron 8 of 13)	intron (NM_001285427, intron 8 of 13)	-40165	NM_182994	75423	Mm.314378	NM_182994	ENSMUSG00000036093	Arl5a	2410015N24Rik|2810410P22Rik|AA408731|AW610751|Arl5|T25534	ADP-ribosylation factor-like 5A	protein-coding
common_peak1-16602-10-6-0.549060422951165-1.21398586181642	chr5	150332505	150333000	+	0	NA	intron (NM_029440, intron 1 of 22)	intron (NM_029440, intron 1 of 22)	1498	NM_029440	381693	Mm.136919	NM_029440	ENSMUSG00000029658	Wdr95	4930434E21Rik	WD40 repeat domain 95	protein-coding
common_peak2-20270-14-11-0.314253659636488-0.435191258261915	chr1	190911243	190911906	+	0	NA	Intergenic	Intergenic	-79855	NM_172650	226823	Mm.209880	NM_172650	ENSMUSG00000026608	Kctd3	4930438A20Rik|9330185B06|E330032J19Rik|NY-REN-45	potassium channel tetramerisation domain containing 3	protein-coding
unique_peak2-37401-6-11--1.01956439034085-1.32595962126035	chr4	141545146	141545642	+	0	NA	intron (NM_177868, intron 3 of 31)	ID4_|SINE|ID	6487	NR_040672	545691	Mm.332015	NR_040672	ENSMUSG00000085424	Fhad1os1	Gm13037|OTTMUSG00000010113	forkhead-associated (FHA) phosphopeptide binding domain 1, opposite strand 1	ncRNA
unique_peak1-2987-17-12-0.517856620063946-0.647240723060192	chr17	79354999	79355843	+	0	NA	intron (NM_001171004, intron 16 of 18)	intron (NM_001171004, intron 16 of 18)	18946	NM_028611	73694	Mm.104959	NM_028611	ENSMUSG00000024082	Ndufaf7	2410091C18Rik|AL033374|PRO1853	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex assembly factor 7	protein-coding
unique_peak1-2228-9-3-1.18961340640422-1.57096726280955	chr15	75047615	75048101	+	0	NA	Intergenic	Intergenic	-50993	NM_008530	17071	Mm.377095	NM_008530	ENSMUSG00000022583	Ly6f	-	lymphocyte antigen 6 complex, locus F	protein-coding
unique_peak1-5133-13-5-1.19350952991661-1.95509489018123	chr5	5648146	5648757	+	0	NA	intron (NM_172447, intron 3 of 22)	RMER15-int|LTR|ERVL	15781	NM_172447	207686	Mm.319007	NM_172447		Cfap69	4921525K03|A330021E22Rik|AI427898	cilia and flagella associated protein 69	protein-coding
unique_peak1-1915-11-0-3.50869358425161-3.61235994796777	chr14	73386429	73386897	+	0	NA	Intergenic	Intergenic	-38747	NR_027860	668489	Mm.158324	NR_027860		Gm9199	EG668489	glycine cleavage system protein H (aminomethyl carrier) pseudogene	pseudo
unique_peak2-39511-4-5--0.608423014574403-0.909929411522249	chr9	63761631	63761982	+	0	NA	Intergenic	ID4_|SINE|ID	108060	NM_008542	17130	Mm.325757	NM_008542	ENSMUSG00000036867	Smad6	Madh6|b2b390Clo	SMAD family member 6	protein-coding
common_peak2-29028-13-11-0.193509529916613-0.379391706698377	chr5	113873254	113873751	+	0	NA	Intergenic	Intergenic	-45965	NM_177292	320916	Mm.102783	NM_177292	ENSMUSG00000063430	Wscd2	4933413A10Rik|C530024P05Rik|Gm450	WSC domain containing 2	protein-coding
common_peak2-19886-48-59-0.0640365556262958-0.329513426812585	chr1	97660619	97662050	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-48239	NR_040479	75381	Mm.417807	NR_040479		4930598F16Rik	-	RIKEN cDNA 4930598F16 gene	ncRNA
unique_peak1-2752-8-7-0.00522241794757061-1.00793137938329	chr17	3367939	3368433	+	0	NA	intron (NM_001122998, intron 1 of 26)	intron (NM_001122998, intron 1 of 26)	-29021	NM_011878	24001	Mm.137134	NM_011878	ENSMUSG00000023800	Tiam2	3000002F19Rik|STEF|mKIAA2016	T cell lymphoma invasion and metastasis 2	protein-coding
unique_peak1-700-8-3-1.00522241794757-1.39487600375387	chr10	80981296	80981847	+	0	NA	intron (NM_010304, intron 1 of 6)	B3|SINE|B2	5399	NM_010304	14676	Mm.1546	NM_010304	ENSMUSG00000034792	Gna15	G[a]15|Galpha15	guanine nucleotide binding protein, alpha 15	protein-coding
common_peak1-17387-39-30-0.661564936532279-1.30310500416066	chr7	138919114	138920346	+	0	NA	Intergenic	Intergenic	215825	NM_009774	12237	Mm.927	NM_009774	ENSMUSG00000066979	Bub3	AU019800|AU021329|AU043350|AW146323|C78067	budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae)	protein-coding
common_peak1-8970-13-12-0.0780323124966764-0.334470287753051	chr11	58167905	58168511	+	0	NA	Intergenic	Intergenic	23988	NM_024480	79566	Mm.290534	NM_024480	ENSMUSG00000013646	Sh3bp5l	2310074E09Rik|BC003251|mKIAA1720	SH3 binding domain protein 5 like	protein-coding
common_peak1-17931-16-27--0.689091279789542-0.798885335210229	chr7	127232427	127233118	+	0	NA	Intergenic	MLT1F2|LTR|MaLR	-13168	NM_145586	233806	Mm.257952	NM_145586	ENSMUSG00000030917	Tmem159	8430420C20Rik	transmembrane protein 159	protein-coding
unique_peak1-1168-8-1-2.00522241794757-2.05605744720049	chr11	99461201	99461649	+	0	NA	Intergenic	Lx2|LINE|L1	-2005	NM_029351	75586	Mm.75707	NM_029351	ENSMUSG00000049809	Krtap9-3	2310040M23Rik	keratin associated protein 9-3	protein-coding
common_peak2-30348-6-13--1.2419568116773-1.58711810488664	chr7	27258054	27258510	+	0	NA	intron (NM_172896, intron 10 of 10)	intron (NM_172896, intron 10 of 10)	38150	NM_172896	243880	Mm.322356	NM_172896	ENSMUSG00000040601	Nlrp4a	E330021B02|E330028A19Rik|NALP4|Nalp-eta|Nalp-ita|Nalp4a	NLR family, pyrin domain containing 4A	protein-coding
common_peak2-23598-10-5-0.771452844287613-1.33892459842472	chr15	80263930	80264315	+	0	NA	Intergenic	Intergenic	126778	NM_001163189	383075	Mm.297626	NM_001163189	ENSMUSG00000050439	Enthd1	Gm1242|Gm86	ENTH domain containing 1	protein-coding
common_peak2-26357-15-10-0.552733131918359-0.604422558181019	chr2	37881723	37882239	+	0	NA	intron (NM_146122, intron 8 of 21)	intron (NM_146122, intron 8 of 21)	250212	NM_001163566	241324	Mm.392369	NM_001163566	ENSMUSG00000035403	Crb2	5930402A21|BC043114	crumbs homolog 2 (Drosophila)	protein-coding
unique_peak1-1247-11-5-0.923731083530457-1.477227296591	chr11	115218697	115219305	+	0	NA	intron (NM_175454, intron 6 of 18)	intron (NM_175454, intron 6 of 18)	10032	NM_175454	217310	Mm.205707	NM_175454	ENSMUSG00000034586	Hid1	C630004H02Rik	HID1 domain containing	protein-coding
unique_peak1-5433-14-1-2.89921616035764-3.91338994363176	chr5	114964927	114965607	+	0	NA	Intergenic	B4A|SINE|B4	-52993	NM_001004180	433940	Mm.194212	NM_001004180	ENSMUSG00000041930	Fam222a	-	family with sequence similarity 222, member A	protein-coding
common_peak2-29317-8-8--0.164702583494742-1.00793137938329	chr5	146691609	146691961	+	0	NA	promoter-TSS (NM_007818)	promoter-TSS (NM_007818)	-355	NM_007818	13112	Mm.332844	NM_007818	ENSMUSG00000056035	Cyp3a11	AI256190|Cyp3a|IIIAm1|Pcn	cytochrome P450, family 3, subfamily a, polypeptide 11	protein-coding
common_peak1-17266-9-12--0.510826311736872-0.394412252720706	chr6	134898468	134898966	+	0	NA	intron (NR_037956, intron 1 of 1)	intron (NR_037956, intron 1 of 1)	19607	NR_037955	381822	Mm.5935	NR_037955	ENSMUSG00000098318	1190002F15Rik	AI120476	RIKEN cDNA 1190002F15 gene	ncRNA
common_peak2-32056-62-103--0.289688259339007-0.675836349268218	chr9	86695141	86696386	+	0	NA	intron (NM_001277982, intron 14 of 29)	intron (NM_001277982, intron 14 of 29)	59329	NM_178738	244954	Mm.257629	NM_178738	ENSMUSG00000033491	Prss35	6030424L22Rik|P3D9	protease, serine 35	protein-coding
unique_peak2-39212-4-4--0.345388608740609-0.864171920961574	chr8	106608224	106608512	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-17157	NM_009868	12562	Mm.21767	NM_009868	ENSMUSG00000031871	Cdh5	7B4|AA408225|Cd144|VE-Cad|VECD|VEcad|Vec	cadherin 5	protein-coding
common_peak1-11392-123-120-0.676960012732212-4.03235115066707	chr15	97836593	97840891	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-3587	NM_001113515	12824	Mm.2423	NM_031163	ENSMUSG00000022483	Col2a1	Col2|Col2a|Col2a-1|Del1|Dmm|Lpk|M100856|Rgsc856	collagen, type II, alpha 1	protein-coding
common_peak2-30261-30-50--0.502749932479622-0.798133060242836	chr7	13037298	13038364	+	0	NA	Intergenic	L1_Mur1|LINE|L1	-25823	NM_001039951	67370	Mm.98929	NM_026112	ENSMUSG00000030386	Zfp606	2410022M24Rik|AW494727	zinc finger protein 606	protein-coding
common_peak2-26623-59-30-1.3711676904857-5.42197075224249	chr2	118540008	118541497	+	0	NA	intron (NM_177568, intron 18 of 31)	intron (NM_177568, intron 18 of 31)	-11053	NM_001081971	383787	Mm.35758	NM_001081971	ENSMUSG00000078137	Ankrd63	Gm1337	ankyrin repeat domain 63	protein-coding
common_peak1-18071-38-21-1.11202104066123-2.65769701904854	chr8	18726607	18728029	+	0	NA	intron (NM_007426, intron 1 of 8)	intron (NM_007426, intron 1 of 8)	14244	NM_007426	11601	Mm.439874	NM_007426	ENSMUSG00000031465	Angpt2	Agpt2|Ang-2|Ang2	angiopoietin 2	protein-coding
common_peak1-10923-27-28-0.133564955767664-0.358978896303361	chr15	8169007	8169846	+	0	NA	intron (NM_001162906, intron 27 of 52)	intron (NM_001162906, intron 27 of 52)	50320	NM_001162906	73692	Mm.164436	NM_001162906	ENSMUSG00000039801	2410089E03Rik	4732468D17Rik|b2b012Clo	RIKEN cDNA 2410089E03 gene	protein-coding
unique_peak2-39634-2-5--1.50241675698448-1.08602067057793	chr9	102857456	102857876	+	0	NA	Intergenic	L2|LINE|L2	-53153	NM_033314	24059	Mm.207106	NM_033314	ENSMUSG00000032548	Slco2a1	2310021C19Rik|Pgt|Slc21a2|mPgt	solute carrier organic anion transporter family, member 2a1	protein-coding
common_peak1-18290-19-7-1.40268732666169-1.89173646618542	chr8	44877061	44877868	+	0	NA	Intergenic	L1Md_T|LINE|L1	-92619	NM_001079931	384814	Mm.491652	NM_001079931		Gm5347	EG384814	predicted gene 5347	protein-coding
common_peak1-14480-55-36-0.995166505523752-3.21117143901175	chr3	144505390	144507376	+	0	NA	intron (NM_139148, intron 5 of 13)	L1MA5|LINE|L1	5883	NM_139148	229927	Mm.290600	NM_139148	ENSMUSG00000037033	Clca4	-	chloride channel calcium activated 4	protein-coding
unique_peak1-5566-24-9-1.47128180788035-2.52428350728854	chr5	146919708	146920720	+	0	NA	intron (NM_001105160, intron 11 of 12)	intron (NM_001105160, intron 11 of 12)	29380	NM_001105160	100041449	Mm.301900	NM_001105160	ENSMUSG00000061292	Cyp3a59	ENSMUSG00000061292	cytochrome P450, family 3, subfamily a, polypeptide 59	protein-coding
common_peak1-17622-10-13--0.450939577048835-0.386243247519795	chr7	45679453	45679963	+	0	NA	Intergenic	Intergenic	840196	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak2-34469-6-8--0.60452689106201-1.03789460276074	chr14	31662977	31663382	+	0	NA	intron (NM_028839, intron 1 of 7)	MERVL_2A-int|LTR|ERVL	24399	NM_028839	69179	Mm.143025	NM_028839	ENSMUSG00000006526	Tmem110	1810038N08Rik|2310014H19Rik|AW554125	transmembrane protein 110	protein-coding
common_peak1-8508-9-22--1.33394854965279-1.52222891542741	chr10	82699232	82699781	+	0	NA	intron (NM_177388, intron 10 of 10)	RCHARR1|DNA|MER1_type	101056	NM_177388	338365	Mm.67073	NM_177388	ENSMUSG00000034591	Slc41a2	A230035L05Rik|SLC41A1-L1	solute carrier family 41, member 2	protein-coding
unique_peak2-37100-2-9--2.23938235115068-1.87199725847353	chr3	157934126	157934476	+	0	NA	intron (NM_001291453, intron 8 of 25)	intron (NM_001291453, intron 8 of 25)	234655	NM_001289524	67144	Mm.358704	NM_024194	ENSMUSG00000063052	Lrrc40	2610040E16Rik|AI837674	leucine rich repeat containing 40	protein-coding
unique_peak1-6559-21-4-2.24756117037887-3.74275476306371	chr7	130654780	130655591	+	0	NA	Intergenic	L1MEe|LINE|L1	-11222	NM_001081329	210162	Mm.135397	NM_175435	ENSMUSG00000030757	Zkscan2	9430065N20Rik|AW493225|Zfp694	zinc finger with KRAB and SCAN domains 2	protein-coding
unique_peak1-3483-10-4-1.03448725012141-1.5150158574804	chr19	10556085	10556653	+	0	NA	intron (NM_133689, intron 2 of 13)	intron (NM_133689, intron 2 of 13)	1018	NM_133689	67752	Mm.25939	NM_133689	ENSMUSG00000035179	Ppp1r32	4930579J09Rik|AU015816|IIIG9|IIIG9L|IIIG9S	protein phosphatase 1, regulatory subunit 32	protein-coding
unique_peak1-5401-20-7-1.48807478459119-2.07034318903805	chr5	104397817	104398834	+	0	NA	intron (NM_198030, intron 3 of 6)	intron (NM_198030, intron 3 of 6)	8082	NM_198030	243168	Mm.284944	NM_198030	ENSMUSG00000034528	Hsd17b13	AI047820|PAN1B-like|Pan1b	hydroxysteroid (17-beta) dehydrogenase 13	protein-coding
common_peak1-17970-69-43-1.13571082862144-4.94330620741601	chr7	132344841	132347220	+	0	NA	Intergenic	Lx9|LINE|L1	147270	NR_045804	71208	Mm.159465	NM_172408		4933440M02Rik	-	RIKEN cDNA 4933440M02 gene	ncRNA
unique_peak1-5590-22-10-1.18785248645011-1.74319850844462	chr6	94240565	94241409	+	0	NA	Intergenic	MTD|LTR|MaLR	-7076	NM_001286785	14924	Mm.217216	NM_010367	ENSMUSG00000045095	Magi1	AIP3|BAP1|Baiap1|Gukmi1|MAGI1c|Magi-1|TNRC19|WWP3|mKIAA4129	membrane associated guanylate kinase, WW and PDZ domain containing 1	protein-coding
common_peak1-16193-21-14-0.662598669657717-0.879255460030357	chr5	92497993	92499022	+	0	NA	intron (NM_001080796, intron 3 of 10)	MTA_Mm|LTR|MaLR	13436	NM_001080797	23881	Mm.290530	NM_011816	ENSMUSG00000029405	G3bp2	AA409541|E430034L04Rik|G3BP|mKIAA0660	GTPase activating protein (SH3 domain) binding protein 2	protein-coding
common_peak2-24659-25-43--0.597581713292191-0.895935469411238	chr17	35821708	35823033	+	0	NA	exon (NM_007584, exon 13 of 18)	exon (NM_007584, exon 13 of 18)	-11743	NM_010364	14885	Mm.10182	NM_010364	ENSMUSG00000001524	Gtf2h4	AW545633|BTF2 p52|TFIIH|p44|p52	general transcription factor II H, polypeptide 4	protein-coding
unique_peak2-35432-6-8--0.60452689106201-1.03789460276074	chr17	34931148	34931643	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	9976	NM_009995	13079	Mm.440407	NM_009995	ENSMUSG00000024365	Cyp21a1	21-OH|21OH|21OHA|21OHB|CYP21OH-A|Cyp21|Cyp21-ps1|Cyp21B|Cyp21a2-ps|Cyp21a2ps|Oh21-1|Oh21-2	cytochrome P450, family 21, subfamily a, polypeptide 1	protein-coding
common_peak2-29272-156-225-0.188604295760026-0.791004461956514	chr5	142814788	142817661	+	0	NA	Intergenic	Intergenic	-61227	NM_199068	17425	Mm.24214	NM_010812	ENSMUSG00000056493	Foxk1	A630048H08Rik|AI463295|ENSMUSG00000075577|Gm10868|Mnf	forkhead box K1	protein-coding
common_peak1-16156-31-35-0.0553136693708112-0.313095283157747	chr5	76904900	76906237	+	0	NA	Intergenic	Intergenic	-7534	NR_033501	639545	Mm.478255	NR_033501		Gm7271	EG639545	predicted gene 7271	pseudo
common_peak1-15075-27-46--0.563042900782402-0.849650211186454	chr3	126831857	126832740	+	0	NA	Intergenic	Intergenic	-31925	NR_105030	100862268	Mm.444603	NR_105029	ENSMUSG00000097456	LOC100862268	-	uncharacterized LOC100862268	ncRNA
common_peak2-31957-68-93-0.0153719276206585-0.30565023687711	chr9	65549761	65551912	+	0	NA	exon (NM_172536, exon 5 of 10)	exon (NM_172536, exon 5 of 10)	26481	NM_001301307	18247	Mm.116749	NM_010952	ENSMUSG00000040652	Oaz2	AZ-2|AZ2|Oaz2-ps|Sez15	ornithine decarboxylase antizyme 2	protein-coding
common_peak2-24030-27-31--0.00845404910476422-0.304476922018591	chr16	23224797	23225556	+	0	NA	promoter-TSS (NM_001252505)	promoter-TSS (NM_001252505)	363	NM_145933	20440	Mm.149029	NM_145933	ENSMUSG00000022885	St6gal1	AW742324|Siat1|St6Gal-I|St6gal|St6galI	beta galactoside alpha 2,6 sialyltransferase 1	protein-coding
common_peak1-17932-7-1-1.79909083029819-1.80617997398389	chr7	127233464	127233873	+	0	NA	Intergenic	Intergenic	-12272	NM_145586	233806	Mm.257952	NM_145586	ENSMUSG00000030917	Tmem159	8430420C20Rik	transmembrane protein 159	protein-coding
unique_peak2-34406-3-9--1.73591118484664-1.57096726280955	chr14	7958741	7959194	+	0	NA	intron (NM_001270812, intron 2 of 5).3	RLTR14-int|LTR|ERV1	-20996	NM_001024712	100042149	Mm.396155	NM_001024712	ENSMUSG00000092167	Gm3696	544988|ENSMUSG00000056940|Gm10014	predicted gene 3696	protein-coding
common_peak2-32149-12-16--0.4386868561627-0.368541233333383	chr9	108305294	108306135	+	0	NA	TTS (NM_001135198)	TTS (NM_001135198)	10549	NM_053216	112418	Mm.78287	NM_053216	ENSMUSG00000032611	1700102P08Rik	AI593206	RIKEN cDNA 1700102P08 gene	protein-coding
unique_peak1-600-8-4-0.683294323060208-1.21878474469819	chr10	19571602	19572255	+	0	NA	promoter-TSS (NM_029529)	promoter-TSS (NM_029529)	-663	NM_029529	76157	Mm.74324	NM_029529	ENSMUSG00000050473	Slc35d3	6230421J19Rik|Frcl1	solute carrier family 35, member D3	protein-coding
common_peak1-14006-23-14-0.814876908900562-1.09492971584134	chr2	106002596	106003538	+	0	NA	Intergenic	Intergenic	-159361	NR_033993	99349	Mm.25661	NM_026992	ENSMUSG00000027166	Dnajc24	1700030A21Rik|2610027M02Rik|AV066965|AW240712|Dph4|MmDjC7|Zcsl3	DnaJ (Hsp40) homolog, subfamily C, member 24	protein-coding
common_peak1-17796-8-4-0.683294323060208-1.21878474469819	chr7	98816427	98816897	+	0	NA	intron (NM_011807, intron 2 of 22)	intron (NM_011807, intron 2 of 22)	-394242	NM_001243046	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
unique_peak2-33481-5-6--0.511735258063458-0.947717972411649	chr11	69881204	69881591	+	0	NA	Intergenic	URR1A|DNA|MER1_type	13540	NM_001291132	11889	Mm.6559	NM_009714	ENSMUSG00000020884	Asgr1	ASGPR1|Asgr|Asgr-1|HL-1	asialoglycoprotein receptor 1	protein-coding
common_peak1-10848-12-5-1.06381348436648-1.78669045979184	chr14	120276658	120277280	+	0	NA	Intergenic	Tigger7|DNA|MER2_type	128520	NR_045621	75432	Mm.443277	NR_045621		1700006F04Rik	-	RIKEN cDNA 1700006F04 gene	ncRNA
common_peak2-27928-10-6-0.549060422951165-1.21398586181642	chr4	15249846	15250194	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	57053	NM_181401	100201	Mm.394111	NM_181401	ENSMUSG00000043252	Tmem64	9630015D15Rik|AI790744|AV300874	transmembrane protein 64	protein-coding
common_peak2-29499-15-13-0.204809828498052-0.368541233333383	chr6	31517757	31518303	+	0	NA	Intergenic	Intergenic	-4093	NM_013723	27205	Mm.89918	NM_013723	ENSMUSG00000025608	Podxl	AW121214|Ly102|PC|PCLP-1|Pclp1	podocalyxin-like	protein-coding
unique_peak1-7084-13-4-1.45654393575041-2.23384849113406	chr9	22386171	22386961	+	0	NA	intron (NM_181316, intron 9 of 21)	intron (NM_181316, intron 9 of 21)	106407	NM_178415	319845	Mm.176725	NM_178415	ENSMUSG00000035919	Bbs9	E130103I17Rik	Bardet-Biedl syndrome 9 (human)	protein-coding
common_peak1-14752-11-7-0.508693584251613-1.21681515183528	chr3	87960382	87961156	+	0	NA	intron (NM_133665, intron 3 of 10)	intron (NM_133665, intron 3 of 10)	14452	NM_133665	17261	Mm.28184	NM_133665	ENSMUSG00000001419	Mef2d	C80750	myocyte enhancer factor 2D	protein-coding
common_peak2-30152-15-9-0.690236655668294-0.732381977911291	chr6	146634163	146634572	+	0	NA	Intergenic	Intergenic	28627	NR_046277	74925	Mm.386304	NR_046277	ENSMUSG00000085238	4930479D17Rik	-	RIKEN cDNA 4930479D17 gene	ncRNA
unique_peak2-36806-8-18--1.24270509549601-1.15812782348128	chr3	84259267	84260034	+	0	NA	intron (NM_001205355, intron 6 of 11)	intron (NM_001205355, intron 6 of 11)	23763	NM_001205355	229474	Mm.331107	NM_001033301		Fhdc1	6330505N24Rik|Gm126	FH2 domain containing 1	protein-coding
unique_peak1-4850-10-0-3.35641534500877-3.31132995230379	chr3	155816398	155816875	+	0	NA	Intergenic	Intergenic	177318	NR_040553	329780	Mm.119000	NR_040553		9330178D15Rik	9330178D15	RIKEN cDNA 9330178D15 gene	ncRNA
common_peak1-10348-15-21--0.447266868081641-0.448200956659578	chr13	80884274	80885079	+	0	NA	Intergenic	Intergenic	-138007	NM_001042591	105171	Mm.423137	NM_001042591	ENSMUSG00000074794	Arrdc3	AI450344|mKIAA1376	arrestin domain containing 3	protein-coding
common_peak2-19667-74-50-1.04346123500711-4.63264272633029	chr1	54604305	54605906	+	0	NA	intron (NM_001163314, intron 2 of 26)	intron (NM_001163314, intron 2 of 26)	9423	NM_001163314	241062	Mm.103539	NM_175508	ENSMUSG00000073678	Pgap1	5033403E17Rik|9030223K07Rik|A530084K22|D230012E17Rik|oto	post-GPI attachment to proteins 1	protein-coding
common_peak1-17579-7-7--0.200909169701811-0.97990265578305	chr7	38230704	38231221	+	0	NA	Intergenic	Intergenic	323809	NM_172385	243937	Mm.322505	NM_172385	ENSMUSG00000043456	Zfp536	9630010P11Rik|Znf536|mKIAA0390	zinc finger protein 536	protein-coding
common_peak1-13674-14-16--0.188246680892695-0.308035960714963	chr2	28526261	28527032	+	0	NA	intron (NM_001289575, intron 9 of 22)	intron (NM_001289575, intron 9 of 22)	28525	NM_027283	69987	Mm.239376	NM_027283	ENSMUSG00000026809	1700026L06Rik	MAST	RIKEN cDNA 1700026L06 gene	protein-coding
common_peak1-12813-22-8-1.47735910364509-2.29727994934156	chr18	67464665	67465464	+	0	NA	intron (NM_053261, intron 2 of 7)	B3|SINE|B2	16187	NM_053261	114663	Mm.34079	NM_053261	ENSMUSG00000024525	Impa2	2210415D20Rik|AI326924|AW259601	inositol (myo)-1(or 4)-monophosphatase 2	protein-coding
common_peak2-24419-29-30-0.158093770228236-0.384630725886669	chr17	17063774	17064687	+	0	NA	Intergenic	Intergenic	-136837	NM_001005358	449000	Mm.483718	NM_001005358	ENSMUSG00000096696	Zfp960	-	zinc finger protein 960	protein-coding
common_peak1-12903-20-30--0.466121525795682-0.569352520859861	chr18	82910486	82911330	+	0	NA	Intergenic	Intergenic	17523	NR_045389	76961	Mm.396392	NR_045389		2210420H20Rik	-	RIKEN cDNA 2210420H20 gene	ncRNA
unique_peak1-1922-13-1-2.77847203063777-3.64038867156802	chr14	75867558	75868163	+	0	NA	intron (NM_001128093, intron 1 of 1)	intron (NM_001128093, intron 1 of 1)	12071	NM_001128093	380918	Mm.484360	NM_001128093	ENSMUSG00000091722	Siah3	Gm912	seven in absentia homolog 3 (Drosophila)	protein-coding
common_peak1-17713-18-13-0.505564229170747-0.625923329873571	chr7	79301262	79302060	+	0	NA	intron (NM_001024703, intron 17 of 22)	intron (NM_001024703, intron 17 of 22)	149820	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding
common_peak1-9539-28-16-0.965496278571123-1.60877160026697	chr11	116210159	116211254	+	0	NA	exon (NM_027258, exon 13 of 19)	exon (NM_027258, exon 13 of 19)	-14038	NM_008240	15223	Mm.378938	NM_008240	ENSMUSG00000034227	Foxj1	FKHL-13|HFH-4|Hfh4	forkhead box J1	protein-coding
common_peak1-12395-53-53-0.38608551025246-0.870424345776646	chr17	70753046	70754911	+	0	NA	Intergenic	Intergenic	-20154	NM_177639	224997	Mm.311840	NM_027712	ENSMUSG00000003279	Dlgap1	4933422O14Rik|9630002F18|AI845682|AI848168|BB075781|D17Bwg0511e|GKAP/SAPAP|GKPA/SAPAP|Gkap|Sapap1|mKIAA4162	discs, large (Drosophila) homolog-associated protein 1	protein-coding
common_peak1-15590-32-28-0.421111024092088-0.694972475810963	chr4	129672064	129673115	+	0	NA	intron (NM_001290715, intron 1 of 28)	intron (NM_001290715, intron 1 of 28)	3291	NM_001290715	230775	Mm.262241	NM_173071	ENSMUSG00000028782	Bai2	-	brain-specific angiogenesis inhibitor 2	protein-coding
common_peak2-21269-39-50--0.0566640950523416-0.303223439438773	chr11	69765869	69766662	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	-4573	NM_009204	20528	Mm.10661	NM_009204	ENSMUSG00000018566	Slc2a4	Glut-4|Glut4	solute carrier family 2 (facilitated glucose transporter), member 4	protein-coding
unique_peak2-35759-6-10--0.894033508256995-1.21398586181642	chr18	39733571	39734172	+	0	NA	Intergenic	Intergenic	-86972	NM_008173	14815	Mm.129481	NM_008173	ENSMUSG00000024431	Nr3c1	GR|Grl-1|Grl1	nuclear receptor subfamily 3, group C, member 1	protein-coding
common_peak2-21667-121-150-0.32896104255292-1.32526976644043	chr11	103131839	103132970	+	0	NA	Intergenic	Intergenic	-3689	NM_016896	53859	Mm.158981	NM_016896	ENSMUSG00000020941	Map3k14	Nik|aly	mitogen-activated protein kinase kinase kinase 14	protein-coding
unique_peak2-39176-5-7--0.704380336005853-1.01466476204226	chr8	94876008	94876354	+	0	NA	intron (NR_033641, intron 1 of 6)	(CA)n|Simple_repeat|Simple_repeat	3838	NR_110452	71296	Mm.86664	NR_033641	ENSMUSG00000031736	Crnde	4933436C20Rik	colorectal neoplasia differentially expressed (non-protein coding)	ncRNA
common_peak2-26539-18-24--0.330937038546373-0.380101753845076	chr2	92678457	92679233	+	0	NA	Intergenic	Intergenic	-76413	NM_030725	80976	Mm.33490	NM_030725	ENSMUSG00000027220	Syt13	5730409J20Rik|AI549909|mKIAA1427	synaptotagmin XIII	protein-coding
common_peak2-19748-42-61--0.211866982519691-0.393610822453566	chr1	75141278	75143379	+	0	NA	exon (NM_170755, exon 8 of 9)	exon (NM_170755, exon 8 of 9)	2968	NM_170755	227298	Mm.273062	NM_170755	ENSMUSG00000049339	Fam134a	-	family with sequence similarity 134, member A	protein-coding
unique_peak1-5131-14-5-1.31425365963649-1.4372489031793	chr5	4220753	4221441	+	0	NA	Intergenic	Intergenic	28730	NM_001042670	208595	Mm.129815	NM_001042670	ENSMUSG00000053178	Mterf1b	ENSMUSG00000053178|Gm9897	mitochondrial transcription termination factor 1b	protein-coding
common_peak1-9621-24-28--0.0647710923598552-0.301029995663979	chr11	121259427	121260563	+	0	NA	Intergenic	MMERVK10C-int|LTR|ERVK	-10430	NM_139147	217371	Mm.281639	NM_139147	ENSMUSG00000025170	Rab40b	SEC4L|rar	Rab40B, member RAS oncogene family	protein-coding
unique_peak2-33033-3-6--1.22133801201688-1.08602067057793	chr10	69927362	69927770	+	0	NA	intron (NM_024244, intron 3 of 13)	MIRb|SINE|MIR	23908	NM_001143776	71721	Mm.477813	NM_024244	ENSMUSG00000043259	Fam13c	1200015N20Rik|C030038O19Rik|mKIAA1796	family with sequence similarity 13, member C	protein-coding
common_peak1-19450-16-15-0.118263642268062-0.328191099940264	chrX	101429508	101430260	+	0	NA	Intergenic	Intergenic	-33428	NM_001077354	245555	Mm.381907	NM_001077354	ENSMUSG00000046449	C77370	A230051P11|C77386|Kiaa2022|Xpn|mKIAA2022	expressed sequence C77370	protein-coding
common_peak1-17846-17-17-0.0483713367627256-0.325169893479371	chr7	112188202	112189037	+	0	NA	Intergenic	RLTR10-int|LTR|ERVK	4905	NM_147095	259099	Mm.377841	NM_147095	ENSMUSG00000073915	Olfr676	MOR32-1	olfactory receptor 676	protein-coding
common_peak2-20667-39-49--0.0280949428555708-0.301029995663988	chr10	84576343	84577268	+	0	NA	intron (NM_001013028, intron 2 of 2)	RMER15|LTR|ERVL	11433	NM_001013028	103266	Mm.335025	NM_001013028	ENSMUSG00000060935	Tmem263	AI597468	transmembrane protein 263	protein-coding
common_peak1-15488-15-23--0.5727977501655-0.575340103425218	chr4	109117449	109118307	+	0	NA	TTS (NM_001145948)	TTS (NM_001145948)	29626	NM_001145948	230603	Mm.33091	NM_153392	ENSMUSG00000028555	Ttc39a	4922503N01Rik	tetratricopeptide repeat domain 39A	protein-coding
common_peak2-29794-33-53--0.423549939637939-0.696926118858569	chr6	90736081	90737401	+	0	NA	intron (NM_001134384, intron 1 of 13)	intron (NM_001134384, intron 1 of 13)	23376	NM_001134384	232227	Mm.196943	NM_182784	ENSMUSG00000034312	Iqsec1	AW561907|BC026481|BRAG2|D6Ertd349e|cI-43	IQ motif and Sec7 domain 1	protein-coding
common_peak1-10838-23-28--0.136213490618491-0.317118655902079	chr14	105587996	105588928	+	0	NA	Intergenic	ORR1D2|LTR|MaLR	-11918	NM_134077	74213	Mm.474531	NM_134077	ENSMUSG00000022119	Rbm26	1700009P03Rik|AI447318|C230097K14Rik|C86225|MLZ-393|Pro1777|Se70-2	RNA binding motif protein 26	protein-coding
common_peak2-31027-22-35--0.522640896354908-0.664636481544818	chr8	13104378	13105317	+	0	NA	promoter-TSS (NM_146207)	promoter-TSS (NM_146207)	496	NM_178708	234069	Mm.103427	NM_178708	ENSMUSG00000038542	Pcid2	A730042J05Rik	PCI domain containing 2	protein-coding
unique_peak2-38023-1-5--2.2120195109379-1.32905871926422	chr6	34498380	34498625	+	0	NA	Intergenic	Intergenic	72146	NM_007563	12183	Mm.282863	NM_007563	ENSMUSG00000038871	Bpgm	AI323730|AL022789|C86192	2,3-bisphosphoglycerate mutase	protein-coding
unique_peak2-39509-3-7--1.41398308995928-1.23214870625617	chr9	63747989	63748476	+	0	NA	Intergenic	L1MB5|LINE|L1	121634	NM_008542	17130	Mm.325757	NM_008542	ENSMUSG00000036867	Smad6	Madh6|b2b390Clo	SMAD family member 6	protein-coding
common_peak2-21985-38-75--0.676474854145055-1.59856490369343	chr12	52503982	52504937	+	0	NA	intron (NM_029825, intron 10 of 24)	B1_Mm|SINE|Alu	25892	NM_029825	76983	Mm.216511	NM_029825	ENSMUSG00000020952	Scfd1	3110021P21Rik|RA410|STXBP1L2	Sec1 family domain containing 1	protein-coding
unique_peak2-38591-3-7--1.41398308995928-1.23214870625617	chr7	73594870	73595387	+	0	NA	Intergenic	Intergenic	-22765	NM_053080	56847	Mm.140988	NM_053080	ENSMUSG00000015134	Aldh1a3	ALDH6|RALDH3|V1	aldehyde dehydrogenase family 1, subfamily A3	protein-coding
unique_peak2-39000-5-8--0.874305337448166-1.10484139239135	chr8	46738647	46739192	+	0	NA	intron (NM_172752, intron 1 of 22)	intron (NM_172752, intron 1 of 22)	145777	NM_001205219	234214	Mm.211096	NM_172752	ENSMUSG00000031626	Sorbs2	2010203O03Rik|9430041O17Rik|A530071H08|Argbp2|mKIAA0777	sorbin and SH3 domain containing 2	protein-coding
unique_peak2-36608-7-8--0.370834171144123-1.00793137938329	chr2	180070659	180071117	+	0	NA	intron (NR_045877, intron 3 of 4)	intron (NR_045877, intron 3 of 4)	-1504	NM_008093	14464	Mm.388880	NM_008093	ENSMUSG00000015627	Gata5	-	GATA binding protein 5	protein-coding
unique_peak2-36320-5-6--0.511735258063458-0.947717972411649	chr2	80616806	80617276	+	0	NA	Intergenic	Intergenic	137620	NM_001190179	69482	Mm.29200	NM_027091		Nup35	2310006I24Rik|35kDa|5330402E05Rik|MP44|NO44	nucleoporin 35	protein-coding
common_peak2-21783-16-24--0.525592547506663-0.561823156887258	chr11	117779275	117780444	+	0	NA	Intergenic	B4A|SINE|B4	-45019	NM_027919	71776	Mm.3200	NM_027919	ENSMUSG00000017713	Tha1	1300017K07Rik|GLY1	threonine aldolase 1	protein-coding
common_peak2-27191-23-35--0.448157496933232-0.590428395010947	chr3	37312449	37313263	+	0	NA	intron (NM_001291044, intron 2 of 4)	L2a|LINE|L2	5662	NM_001291044	229228	Mm.436967	NM_153561	ENSMUSG00000050174	Nudt6	Asfgf2b	nudix (nucleoside diphosphate linked moiety X)-type motif 6	protein-coding
common_peak2-27051-83-109-0.132862911581467-0.437044798151685	chr2	180701250	180702418	+	0	NA	promoter-TSS (NM_001177710)	promoter-TSS (NM_001177710)	-96	NM_145760	228998	Mm.33765	NM_145760	ENSMUSG00000027575	Arfgap1	AI115377|Arf1gap	ADP-ribosylation factor GTPase activating protein 1	protein-coding
common_peak2-22362-12-5-1.06381348436648-1.78669045979184	chr13	28607610	28607956	+	0	NA	intron (NR_045053, intron 7 of 8)	intron (NR_045053, intron 7 of 8)	194959	NR_105787	102466635		NR_105787	miRBase:MI0021897	Mir6368	mmu-mir-6368	microRNA mir-6368	ncRNA
common_peak1-18832-11-16--0.578769256998726-0.503257505534083	chr9	14156582	14157277	+	0	NA	Intergenic	Intergenic	28757	NM_028013	71946	Mm.41423	NM_028013	ENSMUSG00000037419	Endod1	2210414F18Rik|2310067E08Rik|C85344	endonuclease domain containing 1	protein-coding
common_peak1-17042-25-29--0.0450406902634128-0.301029995663982	chr6	94282803	94283954	+	0	NA	Intergenic	L1MB8|LINE|L1	-49467	NM_001286785	14924	Mm.217216	NM_010367	ENSMUSG00000045095	Magi1	AIP3|BAP1|Baiap1|Gukmi1|MAGI1c|Magi-1|TNRC19|WWP3|mKIAA4129	membrane associated guanylate kinase, WW and PDZ domain containing 1	protein-coding
unique_peak2-37136-4-11--1.6084230145744-1.68134727924692	chr4	19575162	19575537	+	0	NA	intron (NR_074089, intron 8 of 23)	intron (NR_074089, intron 8 of 23)	60802	NM_177327	107568	Mm.78312	NM_177327	ENSMUSG00000041058	Wwp1	8030445B08Rik|AIP5|SDRP1|Tiul1	WW domain containing E3 ubiquitin protein ligase 1	protein-coding
common_peak2-28140-103-147-0.0785443802310901-0.35908779692976	chr4	98395420	98396703	+	0	NA	intron (NM_001081202, intron 2 of 4)	B1_Mus1|SINE|Alu	2616	NM_001081202	381591	Mm.34340	NM_001081202	ENSMUSG00000087166	L1td1	AA546746|AB211064|D76865|ECAT11	LINE-1 type transposase domain containing 1	protein-coding
common_peak1-11588-43-62--0.194716737976214-0.39202633512402	chr16	16302281	16303765	+	0	NA	promoter-TSS (NR_038046)	promoter-TSS (NR_038046)	-35	NR_038046	70120	Mm.37486	NM_198246	ENSMUSG00000022792	Yars2	2210023C10Rik|tyrRS	tyrosyl-tRNA synthetase 2 (mitochondrial)	protein-coding
unique_peak1-3182-20-5-1.90311228387004-2.81016724606745	chr18	44668932	44669778	+	0	NA	intron (NM_001085373, intron 6 of 18)	intron (NM_001085373, intron 6 of 18)	129201	NM_027490	70640	Mm.87629	NM_027490	ENSMUSG00000024472	Dcp2	2410015D23Rik|5730537H01Rik|AL118268	DCP2 decapping enzyme homolog (S. cerevisiae)	protein-coding
unique_peak2-33978-2-8--2.08737925770563-1.65811743852845	chr12	84970869	84971356	+	0	NA	Intergenic	MERVL-int|LTR|ERVL	-2072	NM_027349	67039	Mm.46005	NM_027349	ENSMUSG00000010608	Rbm25	2600011C06Rik|2610015J01Rik|A130095G20Rik|AI159652|AL023075|AU043498|RNPC7	RNA binding motif protein 25	protein-coding
common_peak2-30793-15-18--0.235762762887929-0.326591483156968	chr7	127273420	127274045	+	0	NA	Intergenic	ORR1E|LTR|MaLR	15072	NM_011775	22787	Mm.6510	NM_011775	ENSMUSG00000030911	Zp2	Zp-2	zona pellucida glycoprotein 2	protein-coding
unique_peak2-37593-2-8--2.08737925770563-1.65811743852845	chr5	45669162	45669571	+	0	NA	Intergenic	Intergenic	172102	NM_024236	110391	Mm.30204	NM_024236	ENSMUSG00000015806	Qdpr	2610008L04Rik|D5Ertd371e|Dhpr|PKU2	quinoid dihydropteridine reductase	protein-coding
unique_peak1-5224-8-5-0.420259917226415-1.10484139239135	chr5	38480159	38480663	+	0	NA	intron (NM_001289536, intron 1 of 9)	intron (NM_001289536, intron 1 of 9)	49942	NM_026959	71116	Mm.18959	NM_026959	ENSMUSG00000029125	Stx18	1810035L21Rik|4933425D03Rik|AU041562	syntaxin 18	protein-coding
common_peak2-22834-11-17--0.661231417190699-0.58239619684445	chr14	20674277	20674901	+	0	NA	Intergenic	Intergenic	16442	NR_105025	52512	Mm.483998	NR_105025		D14Ertd670e	-	DNA segment, Chr 14, ERATO Doi 670, expressed	ncRNA
unique_peak1-1481-10-0-3.35641534500877-3.31132995230379	chr12	112876045	112876714	+	0	NA	intron (NM_021516, intron 13 of 16)	intron (NM_021516, intron 13 of 16)	34170	NM_021273	12709	Mm.16831	NM_021273	ENSMUSG00000001270	Ckb	B-CK|Bck|Ck-3|Ck3|Ckbb	creatine kinase, brain	protein-coding
common_peak1-12958-64-49-0.821590211933879-2.7455047718137	chr19	55541453	55543630	+	0	NA	intron (NM_016862, intron 5 of 7)	intron (NM_016862, intron 5 of 7)	151994	NM_001293686	53611	Mm.258637	NM_016862	ENSMUSG00000024983	Vti1a	1110014F16Rik|1110018K19Rik|4921537J05Rik|MVti1|MVti1a|Vti1|Vti1-rp2	vesicle transport through interaction with t-SNAREs 1A	protein-coding
common_peak2-25816-14-15--0.100783839642355-0.301029995663982	chr19	38037824	38038425	+	0	NA	intron (NM_001099634, intron 18 of 52)	intron (NM_001099634, intron 18 of 52)	79943	NM_001099634	226101	Mm.34674	NM_177035	ENSMUSG00000048612	Myof	2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3	myoferlin	protein-coding
unique_peak1-3760-10-3-1.35641534500877-1.75805390616669	chr19	54964877	54965440	+	0	NA	Intergenic	IAPLTR2_Mm|LTR|ERVK	208779	NM_008149	14732	Mm.210196	NM_008149	ENSMUSG00000024978	Gpam	GPAT|GPAT1	glycerol-3-phosphate acyltransferase, mitochondrial	protein-coding
common_peak1-15154-13-13--0.0288828914198356-0.309074325783021	chr3	146447069	146447802	+	0	NA	intron (NM_011100, intron 1 of 9)	intron (NM_011100, intron 1 of 9)	-3055	NM_001164200	18749	Mm.16766	NM_011100	ENSMUSG00000005034	Prkacb	Pkacb	protein kinase, cAMP dependent, catalytic, beta	protein-coding
common_peak2-21834-37-48--0.0887167726293896-0.31027100108714	chr11	120548914	120550336	+	0	NA	intron (NM_026877, intron 5 of 15)	intron (NM_026877, intron 5 of 15)	11650	NM_001164224	68938	Mm.294020	NM_026877	ENSMUSG00000025142	Aspscr1	1190006K01Rik|ASPC|ASPCR1|ASPL|ASPS|RCC17|TUG	alveolar soft part sarcoma chromosome region, candidate 1 (human)	protein-coding
unique_peak1-7060-10-1-2.35641534500877-2.57096726280955	chr9	9236121	9236750	+	0	NA	non-coding (NR_045754, exon 1 of 4)	non-coding (NR_045754, exon 1 of 4)	147	NR_045754	100579151	Mm.412450	NR_045754		Gm16833	-	predicted gene, 16833	ncRNA
unique_peak2-39301-5-8--0.874305337448166-1.10484139239135	chr8	123634048	123634461	+	0	NA	Intergenic	Intergenic	-1975	NM_001166482	234814	Mm.31690	NM_172761	ENSMUSG00000031816	Mthfsd	AW049977|BC052066|C920004D05	methenyltetrahydrofolate synthetase domain containing	protein-coding
common_peak1-15181-10-11--0.228547155712387-0.31137425193576	chr3	152511984	152512585	+	0	NA	intron (NM_012028, intron 2 of 4)	Lx2|LINE|L1	132887	NM_012028	26938	Mm.40915	NM_012028		St6galnac5	AI851940|Siat7e	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	protein-coding
common_peak2-22570-13-36--1.43098133499118-2.47671208917977	chr13	64153380	64154502	+	0	NA	Intergenic	Intergenic	36568	NM_008291	15487	Mm.5109	NM_008291	ENSMUSG00000033122	Hsd17b3	-	hydroxysteroid (17-beta) dehydrogenase 3	protein-coding
unique_peak2-33968-4-8--1.19338551529556-1.21878474469819	chr12	81747817	81748271	+	0	NA	intron (NM_026244, intron 1 of 6)	B1_Mur4|SINE|Alu	2842	NM_026244	328133	Mm.238279	NM_026244	ENSMUSG00000048833	Slc39a9	2010002A02Rik|2610511I23Rik|4833420E20Rik|AW209151	solute carrier family 39 (zinc transporter), member 9	protein-coding
common_peak2-30436-37-40-0.168441066867735-0.392002726290462	chr7	44849125	44849891	+	0	NA	Intergenic	Intergenic	1670396	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak1-18862-9-5-0.604650905683064-1.21398586181642	chr9	21510318	21510846	+	0	NA	Intergenic	Intergenic	-17438	NM_001252658	16835	Mm.3213	NM_010700	ENSMUSG00000032193	Ldlr	Hlb301	low density lipoprotein receptor	protein-coding
unique_peak1-6926-9-3-1.18961340640422-1.57096726280955	chr8	106642845	106643395	+	0	NA	intron (NM_009868, intron 2 of 11)	PB1D10|SINE|Alu	17595	NM_009868	12562	Mm.21767	NM_009868	ENSMUSG00000031871	Cdh5	7B4|AA408225|Cd144|VE-Cad|VECD|VEcad|Vec	cadherin 5	protein-coding
unique_peak1-658-12-4-1.32684789020028-2.04196296489515	chr10	59644423	59645073	+	0	NA	3' UTR (NM_016803, exon 4 of 4)	3' UTR (NM_016803, exon 4 of 4)	37260	NM_016803	53374	Mm.12866	NM_016803	ENSMUSG00000057337	Chst3	C6ST|C6ST-1|GST-0	carbohydrate (chondroitin 6/keratan) sulfotransferase 3	protein-coding
unique_peak1-2064-9-7-0.18961340640422-1.05908390183068	chr15	32426173	32426691	+	0	NA	intron (NM_009154, intron 5 of 22)	intron (NM_009154, intron 5 of 22)	251864	NM_009154	20356	Mm.260374	NM_009154	ENSMUSG00000022231	Sema5a	5930434A13|9130201M22Rik|AI464145|Semaf|semF	sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A	protein-coding
common_peak2-28075-12-7-0.648775985087639-0.697979855752659	chr4	80907550	80907905	+	0	NA	Intergenic	L1Md_F2|LINE|L1	180982	NM_010820	17475	Mm.153039	NM_010820	ENSMUSG00000028402	Mpdz	AI225843|B930003D11Rik|MUPP1	multiple PDZ domain protein	protein-coding
common_peak1-10381-33-31-0.331337562525529-0.549429090733244	chr13	94788745	94789871	+	0	NA	Intergenic	L1Md_A|LINE|L1	-38443	NM_172589	218454	Mm.316553	NM_172589	ENSMUSG00000045312	Lhfpl2	6030465B15|AI447312|AW050335|mKIAA0206|vgim	lipoma HMGIC fusion partner-like 2	protein-coding
common_peak2-23237-104-161--0.0351048016724667-0.307156497159774	chr15	8443239	8445413	+	0	NA	Intergenic	Intergenic	-49863	NM_201232	71175	Mm.240329	NM_027707	ENSMUSG00000022141	Nipbl	Idn3	Nipped-B homolog (Drosophila)	protein-coding
unique_peak1-3361-12-2-2.06381348436648-2.79529063155376	chr19	43941376	43942016	+	0	NA	intron (NM_028029, intron 9 of 15)	intron (NM_028029, intron 9 of 15)	28403	NR_033472	100038628	Mm.212585	NR_033472	ENSMUSG00000074828	Gm10768	ENSMUSG00000074828	predicted gene 10768	ncRNA
common_peak2-22809-8-6-0.197867495889966-1.03789460276074	chr14	14632353	14632803	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	129188	NM_177624	218739	Mm.39919	NM_177624	ENSMUSG00000044772	Sntn	A430083B19Rik	sentan, cilia apical structure protein	protein-coding
common_peak1-11447-16-9-0.796335547380699-0.844317084070804	chr15	101182467	101183169	+	0	NA	intron (NM_028770, intron 4 of 8)	intron (NM_028770, intron 4 of 8)	-16965	NR_035462	100316694		NR_035462	miRBase:MI0009930	Mir1941	mmu-mir-1941	microRNA 1941	ncRNA
common_peak2-31929-37-39-0.204064976598456-0.426350872773373	chr9	63377232	63378226	+	0	NA	intron (NM_030068, intron 9 of 21)	intron (NM_030068, intron 9 of 21)	72526	NM_030068	78250	Mm.444612	NM_030068	ENSMUSG00000037801	Iqch	4921504K03Rik	IQ motif containing H	protein-coding
common_peak1-10659-12-9-0.326847890200276-0.459837087125828	chr14	48289189	48289724	+	0	NA	intron (NM_001293635, intron 3 of 40)	PB1D10|SINE|Alu	6025	NM_008477	16709	Mm.3110	NM_008477	ENSMUSG00000021843	Ktn1	-	kinectin 1	protein-coding
common_peak2-27133-48-110--0.823488715115292-3.10889338723156	chr3	22076511	22077638	+	0	NA	intron (NM_030732, intron 2 of 15)	intron (NM_030732, intron 2 of 15)	-73218	NR_004439	19784		NR_004439		Rprl2	RPRH3|Rmrp3	ribonuclease P RNA-like 2	ncRNA
unique_peak1-6301-6-0-2.5653981103803-2.10720996964787	chr7	30891044	30891572	+	0	NA	3' UTR (NM_011981, exon 3 of 3)	3' UTR (NM_011981, exon 3 of 3)	11213	NM_011981	26466	Mm.195092	NM_011981	ENSMUSG00000049421	Zfp260	AI480997|Ozrf1|PEX1|Zfp63|Znf260	zinc finger protein 260	protein-coding
unique_peak2-35743-7-10--0.660340788339108-1.12966497611638	chr18	37485013	37485533	+	0	NA	intron (NM_001301259, intron 1 of 3)	intron (NM_001301259, intron 1 of 3)	5238	NM_053130	93876	Mm.196698	NM_053130	ENSMUSG00000063687	Pcdhb5	Pcdhb4A|PcdhbE	protocadherin beta 5	protein-coding
unique_peak2-32568-1-8--2.79698201165906-2.05605744720049	chr1	84881815	84882140	+	0	NA	intron (NM_025386, intron 2 of 3)	B3|SINE|B2	45561	NM_025386	66153	Mm.381192	NM_025386	ENSMUSG00000073633	Fbxo36	0610008D19Rik|1110020F21Rik|2410002G19Rik|D1Ertd757e	F-box protein 36	protein-coding
common_peak1-10358-8-10--0.454209200689727-1.078512453669	chr13	88821442	88821868	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-139422	NM_010103	13612	Mm.125580	NM_010103	ENSMUSG00000034488	Edil3	Del-1|Del1	EGF-like repeats and discoidin I-like domains 3	protein-coding
common_peak2-24787-14-14--0.00767443525087419-0.308519316180257	chr17	64601358	64602045	+	0	NA	Intergenic	Lx9|LINE|L1	79522	NM_144859	224938	Mm.489681	NM_144859	ENSMUSG00000024083	Pja2	AI447901|AL022700|Neurodap1|mKIAA0438	praja 2, RING-H2 motif containing	protein-coding
unique_peak1-1146-11-0-3.50869358425161-3.61235994796777	chr11	97815163	97815678	+	0	NA	intron (NM_028199, intron 6 of 13)	intron (NM_028199, intron 6 of 13)	32340	NM_028199	72324	Mm.39617	NM_028199	ENSMUSG00000017417	Plxdc1	2410003I07Rik|AI848450|Tem7	plexin domain containing 1	protein-coding
unique_peak2-36227-2-7--1.91745425626332-1.45399745587252	chr2	35690134	35690526	+	0	NA	intron (NM_029774, intron 6 of 9)	intron (NM_029774, intron 6 of 9)	15620	NR_040618	77665	Mm.400558	NR_040618	ENSMUSG00000086449	9030204H09Rik	-	RIKEN cDNA 9030204H09 gene	ncRNA
common_peak2-30567-8-5-0.420259917226415-1.10484139239135	chr7	79392038	79392460	+	0	NA	intron (NM_001024703, intron 2 of 22)	intron (NM_001024703, intron 2 of 22)	59232	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding
common_peak2-29993-16-24--0.525592547506663-0.561823156887258	chr6	122869060	122869947	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-2363	NM_199311	269799	Mm.297275	NM_199311	ENSMUSG00000049037	Clec4a1	BC049354|Dcir4	C-type lectin domain family 4, member a1	protein-coding
common_peak1-13996-30-72--1.02014914938814-2.95733370545705	chr2	104590251	104591217	+	0	NA	Intergenic	PB1D7|SINE|Alu	-7776	NM_144804	211896	Mm.288805	NM_144804	ENSMUSG00000027173	Depdc7	AV216087	DEP domain containing 7	protein-coding
common_peak1-15949-41-54--0.0802110086759997-0.30922471743021	chr5	30154529	30155588	+	0	NA	intron (NR_105781, intron 1 of 2)	L1_Mus3|LINE|L1	39507	NR_105781	102465962		NR_105781	miRBase:MI0021891	Mir6362	mmu-mir-6362	microRNA mir-6362	ncRNA
unique_peak2-33524-4-7--1.02346051385325-1.09384600808989	chr11	76243074	76243543	+	0	NA	intron (NM_198894, intron 16 of 22)	intron (NM_198894, intron 16 of 22)	22663	NM_019818	56322	Mm.18803	NM_019818	ENSMUSG00000020843	Timm22	Tim22	translocase of inner mitochondrial membrane 22	protein-coding
unique_peak1-5436-10-2-1.77145284428761-2.09384600808989	chr5	115520079	115520571	+	0	NA	intron (NM_029012, intron 2 of 10)	intron (NM_029012, intron 2 of 10)	37646	NM_001271591	100502825	Mm.361657	NM_001271590		Gm13826	OTTMUSG00000014624	predicted gene 13826	protein-coding
unique_peak1-3774-8-2-1.42025991722641-1.65811743852845	chr19	55596726	55597270	+	0	NA	intron (NM_001293686, intron 7 of 7)	intron (NM_001293686, intron 7 of 7)	179696	NR_045318	77594	Mm.329924	NR_045318	ENSMUSG00000097632	4930552P12Rik	-	RIKEN cDNA 4930552P12 gene	ncRNA
common_peak1-16011-15-16--0.075298090694683-0.301029995663976	chr5	34636468	34637190	+	0	NA	Intergenic	Intergenic	-5856	NM_001015039	231125	Mm.113388	NM_001015039	ENSMUSG00000037224	Zfyve28	9630058O20Rik|Gm146|mKIAA1643	zinc finger, FYVE domain containing 28	protein-coding
common_peak2-30318-36-38-0.193918867305506-0.429377759889511	chr7	24506864	24507922	+	0	NA	Intergenic	L1Md_F2|LINE|L1	20032	NM_001166718	545934	Mm.480277	NM_001166718	ENSMUSG00000074289	Vmn1r173	EG545934|Gm5892|Gm59	vomeronasal 1 receptor 173	protein-coding
common_peak1-14059-33-45--0.192224393531484-0.36493371439645	chr2	119593999	119595059	+	0	NA	intron (NM_001163701, intron 21 of 24)	(TCTA)n|Simple_repeat|Simple_repeat	-8362	NM_206942	17005	Mm.1740	NM_008523	ENSMUSG00000027297	Ltk	-	leukocyte tyrosine kinase	protein-coding
common_peak1-13565-19-12-0.702247608520594-0.840839978588874	chr2	6349793	6350711	+	0	NA	intron (NM_181399, intron 12 of 13)	intron (NM_181399, intron 12 of 13)	76470	NM_181399	98910	Mm.40673	NM_181399	ENSMUSG00000039046	Usp6nl	AI316785|RNTRE|TRE2NL|mKIAA0019	USP6 N-terminal like	protein-coding
common_peak2-26665-27-29-0.0846553552867171-0.333081040816753	chr2	121955874	121956519	+	0	NA	intron (NM_026251, intron 2 of 17)	intron (NM_026251, intron 2 of 17)	-12074	NM_145531	214585	Mm.222303	NM_145531	ENSMUSG00000033396	Spg11	6030465E24Rik|A330015I11|C530005A01Rik	spastic paraplegia 11	protein-coding
unique_peak1-4191-7-1-1.79909083029819-1.80617997398389	chr2	117733490	117733837	+	0	NA	intron (NR_040631, intron 5 of 5)	MTD|LTR|MaLR	85999	NR_040631	73938	Mm.399107	NR_040631	ENSMUSG00000086221	4930412B13Rik	-	RIKEN cDNA 4930412B13 gene	ncRNA
unique_peak1-4559-8-1-2.00522241794757-2.05605744720049	chr3	51636444	51636958	+	0	NA	intron (NM_001004176, intron 2 of 4)	intron (NM_001004176, intron 2 of 4)	171586	NM_174995	211666	Mm.24679	NM_174995	ENSMUSG00000074604	Mgst2	GST2|MGST-II	microsomal glutathione S-transferase 2	protein-coding
unique_peak1-6040-17-6-1.41094141614743-1.84350559086818	chr6	115284355	115285113	+	0	NA	Intergenic	L1MA7|LINE|L1	-26505	NM_001127330	19016	Mm.3020	NM_011146	ENSMUSG00000000440	Pparg	Nr1c3|PPAR-gamma|PPAR-gamma2|PPARgamma|PPARgamma2	peroxisome proliferator activated receptor gamma	protein-coding
common_peak2-31306-28-41--0.339358302957298-0.489200556185773	chr8	77516660	77518372	+	0	NA	promoter-TSS (NM_178017)	promoter-TSS (NM_178017)	-86	NM_178017	70823	Mm.261739	NM_178017	ENSMUSG00000034518	Hmgxb4	4733401K04Rik|AI316803|E430025G12|Hmgb2l1	HMG box domain containing 4	protein-coding
common_peak2-20640-46-97--0.716713900866407-2.2124271335037	chr10	80797421	80799244	+	0	NA	TTS (NM_001277265)	TTS (NM_001277265)	6884	NM_001277265	21390	Mm.4545	NM_009325	ENSMUSG00000034881	Tbxa2r	TP|TXA2-R	thromboxane A2 receptor	protein-coding
unique_peak2-35538-8-32--2.03917170141088-3.64934937127727	chr17	56608493	56609768	+	0	NA	intron (NM_001252455, intron 1 of 27)	MIRc|SINE|MIR	6773	NM_001252455	19280	Mm.258771	NM_011218	ENSMUSG00000013236	Ptprs	AL022616|PTP|PTP-NU3|PTPNU-3|PTPsigma|Ptpt9|R-PTP-S|RPTPsigma	protein tyrosine phosphatase, receptor type, S	protein-coding
common_peak1-10393-36-54--0.302038627356906-0.47894145157142	chr13	96924624	96925687	+	0	NA	Intergenic	Intergenic	-22623	NM_029210	75209	Mm.40436	NM_029210	ENSMUSG00000051111	Sv2c	4930527L09Rik|AI841971	synaptic vesicle glycoprotein 2c	protein-coding
common_peak2-28143-13-30--1.17572427974911-1.59386218057211	chr4	99120308	99120922	+	0	NA	Intergenic	Intergenic	-202375	NM_010425	15221	Mm.4758	NM_010425	ENSMUSG00000067261	Foxd3	CWH3|Genesis|Hfh2	forkhead box D3	protein-coding
unique_peak1-3238-9-4-0.867685311516858-1.36011389749466	chr18	62162160	62162731	+	0	NA	intron (NM_172628, intron 12 of 16)	ORR1D1|LTR|MaLR	49716	NM_172628	225608	Mm.262320	NM_172628	ENSMUSG00000045629	Sh3tc2	D430044G18Rik	SH3 domain and tetratricopeptide repeats 2	protein-coding
unique_peak2-37980-1-8--2.79698201165906-2.05605744720049	chr6	4746558	4747014	+	0	NA	Intergenic	Intergenic	49480	NM_130877	170676	Mm.320575	NM_130877	ENSMUSG00000092035	Peg10	AA407948|Edr|HB-1|MEF3L|Mar2|Mart2|MyEF-3	paternally expressed 10	protein-coding
unique_peak2-38843-3-10--1.87341470859657-1.75805390616669	chr7	143069809	143070346	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-162015	NM_001081117	17345	Mm.4078	NM_001081117	ENSMUSG00000031004	Mki67	D630048A14Rik|Ki-67|Ki67	antigen identified by monoclonal antibody Ki 67	protein-coding
common_peak1-18146-37-20-1.13367564870706-2.58657013435546	chr8	11330720	11332105	+	0	NA	intron (NM_009932, intron 3 of 47)	intron (NM_009932, intron 3 of 47)	18583	NM_009932	12827	Mm.181021	NM_009932	ENSMUSG00000031503	Col4a2	Col4a-2	collagen, type IV, alpha 2	protein-coding
unique_peak1-1017-14-4-1.57728806547028-2.4322161449009	chr11	74572285	74572909	+	0	NA	Intergenic	Intergenic	-11768	NM_026197	67493	Mm.45748	NM_026197		Mettl16	2610100D03Rik|2810013M15Rik|A830095F14Rik|AI846133|Mett10d	methyltransferase like 16	protein-coding
common_peak2-21404-12-7-0.648775985087639-0.697979855752659	chr11	82907813	82908350	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-22266	NM_011407	20555	Mm.10948	NM_011407	ENSMUSG00000078763	Slfn1	AV316259	schlafen 1	protein-coding
unique_peak2-39589-3-9--1.73591118484664-1.57096726280955	chr9	76016752	76017083	+	0	NA	intron (NM_205844, intron 6 of 8)	intron (NM_205844, intron 6 of 8)	44547	NM_205844	404194	Mm.213862	NM_205844	ENSMUSG00000059383	Gfral	AY457637|Gral	GDNF family receptor alpha like	protein-coding
unique_peak2-36899-2-7--1.91745425626332-1.45399745587252	chr3	96244339	96244700	+	0	NA	intron (NM_001256180, intron 3 of 4)	intron (NM_001256180, intron 3 of 4)	11710	NM_001256181	329716	Mm.275223	NM_183223	ENSMUSG00000046317	BC107364	D730018G16	cDNA sequence BC107364	protein-coding
common_peak2-24248-66-122--0.424030840913399-1.21728102913953	chr16	91647073	91648547	+	0	NA	promoter-TSS (NM_010256)	promoter-TSS (NM_010256)	-259	NM_019973	20658	Mm.46401	NM_019973	ENSMUSG00000022961	Son	2900011L12Rik|AA409051|AU067731|C81487|mKIAA1019|nrebp	Son DNA binding protein	protein-coding
unique_peak1-7046-9-1-2.18961340640422-2.31132995230379	chr9	58457635	58458206	+	0	NA	intron (NM_001293673, intron 1 of 7)	B3|SINE|B2	27873	NM_009145	20320	Mm.15125	NM_009145	ENSMUSG00000032336	Nptn	AW554172|SDR-1|Sdfr1	neuroplastin	protein-coding
common_peak1-19443-17-18--0.0296311752385474-0.306899554715732	chrX	96097109	96097959	+	0	NA	Intergenic	Intergenic	-11210	NM_052976	94190	Mm.254336	NM_052976		Ophn1	C130037N19Rik	oligophrenin 1	protein-coding
unique_peak2-32635-8-8--0.164702583494742-1.00793137938329	chr1	127204796	127205305	+	0	NA	Intergenic	Lx8|LINE|L1	127254	NM_023735	74117	Mm.183102	NM_023735	ENSMUSG00000026341	Actr3	1200003A09Rik|Arp3	ARP3 actin-related protein 3	protein-coding
common_peak1-13272-100-140-0.0972204224119961-0.391342975205301	chr19	36925176	36927068	+	0	NA	intron (NM_001163635, intron 4 of 26)	B3|SINE|B2	17400	NM_001163635	74493	Mm.249310	NM_001163635	ENSMUSG00000024811	Tnks2	5430432P15Rik|AA517131|AI662480|ARTD6|TNKS-2|Tank2	tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2	protein-coding
unique_peak2-37218-4-9--1.34538860874061-1.36011389749466	chr4	86712578	86713007	+	0	NA	intron (NM_172426, intron 4 of 10)	MTC|LTR|MaLR	161075	NM_001110240	76376	Mm.490487	NM_172426	ENSMUSG00000037996	Slc24a2	2810021B17Rik|6330417K15Rik|AI847460|Nckx2	solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	protein-coding
common_peak1-15491-48-53-0.216039649071346-0.488458446780741	chr4	109475612	109476989	+	0	NA	intron (NM_007983, intron 8 of 18)	MTD|LTR|MaLR	127068	NM_007983	14084	Mm.318259	NM_007983	ENSMUSG00000010517	Faf1	AA408698|Dffrx|Fam	Fas-associated factor 1	protein-coding
unique_peak1-6638-11-2-1.92373108353046-2.32232533660526	chr8	10962151	10962653	+	0	NA	Intergenic	Intergenic	-33945	NR_030715	665306	Mm.358758	NR_030715	ENSMUSG00000038917	3930402G23Rik	-	RIKEN cDNA 3930402G23 gene	ncRNA
common_peak2-30644-9-6-0.382258484346616-1.11707584880836	chr7	98415397	98415825	+	0	NA	intron (NM_011807, intron 1 of 22)	L1M2|LINE|L1	176315	NM_011807	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
common_peak2-22952-12-9-0.326847890200276-0.459837087125828	chr14	50896344	50896855	+	0	NA	Intergenic	Lx9|LINE|L1	5347	NM_146665	258659	Mm.377622	NM_146665	ENSMUSG00000091873	Olfr732	MOR241-1	olfactory receptor 732	protein-coding
unique_peak1-707-14-2-2.31425365963649-3.28500101358144	chr10	84700620	84701278	+	0	NA	Intergenic	L1MB3|LINE|L1	-53150	NM_007771	12952	Mm.26237	NM_007771	ENSMUSG00000020038	Cry1	AU020726|AU021000|Phll1	cryptochrome 1 (photolyase-like)	protein-coding
common_peak2-28833-21-12-0.869049547125143-1.18646456559501	chr5	66166832	66167404	+	0	NA	intron (NM_001024917, intron 3 of 19)	intron (NM_001024917, intron 3 of 19)	12358	NM_001024917	333789	Mm.332398	NM_001024917	ENSMUSG00000037795	N4bp2	B3bp|E430014I16|Gm1791|Gm868	NEDD4 binding protein 2	protein-coding
common_peak2-26326-41-24-1.05729251507394-2.59472032287452	chr2	34030991	34031963	+	0	NA	intron (NM_001290576, intron 6 of 7)	intron (NM_001290576, intron 6 of 7)	196088	NM_001290576	18516	Mm.239941	NM_016768	ENSMUSG00000038718	Pbx3	-	pre B cell leukemia homeobox 3	protein-coding
common_peak2-21088-86-114-0.130145743087978-0.431372681404792	chr11	51263015	51264115	+	0	NA	intron (NM_153393, intron 2 of 28)	intron (NM_153393, intron 2 of 28)	-134694	NM_028398	72947	Mm.256875	NM_028398		Phykpl	2900006B13Rik|Agxt2l2	5-phosphohydroxy-L-lysine phospholyase	protein-coding
common_peak2-31756-3-9--1.73591118484664-1.57096726280955	chr9	20888285	20888726	+	0	NA	intron (NR_038081, intron 3 of 16)	intron (NR_038081, intron 3 of 16)	7927	NM_027911	71766	Mm.196137	NM_027911	ENSMUSG00000010205	Raver1	1300006N24Rik|AA050359|mKIAA1978	ribonucleoprotein, PTB-binding 1	protein-coding
common_peak2-21695-11-23--1.07626891646954-1.24082643394777	chr11	106272089	106272898	+	0	NA	intron (NM_023913, intron 12 of 21)	B2_Mm2|SINE|B2	-28538	NM_010494	15896	Mm.394	NM_010494	ENSMUSG00000001029	Icam2	CD102|Icam-2|Ly-60	intercellular adhesion molecule 2	protein-coding
unique_peak1-4539-11-5-0.923731083530457-1.477227296591	chr3	37724530	37725040	+	0	NA	Intergenic	Intergenic	-72950	NR_040559	626410	Mm.389417	NR_040559		Gm20755	-	predicted gene, 20755	ncRNA
common_peak1-8974-21-25--0.130950452874856-0.305461879681376	chr11	58322539	58323314	+	0	NA	Intergenic	Intergenic	-6870	NM_001011861	100502887	Mm.378539	NM_001011861	ENSMUSG00000058807	Olfr331	MOR275-4	olfactory receptor 331	protein-coding
unique_peak2-38657-3-19--2.73591118484664-3.11807310444576	chr7	97360674	97361581	+	0	NA	Intergenic	Intergenic	52815	NM_029256	75338	Mm.487222	NM_029256	ENSMUSG00000030617	Ccdc83	4930549K11Rik|4930554C01Rik|4932423M01Rik	coiled-coil domain containing 83	protein-coding
unique_peak1-642-9-4-0.867685311516858-1.36011389749466	chr10	43463287	43463741	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-2450	NR_040581	69443	Mm.484042	NR_040581		1700027J07Rik	-	RIKEN cDNA 1700027J07 gene	ncRNA
common_peak2-30687-42-84--0.667061608270518-1.72857853356109	chr7	109751379	109753077	+	0	NA	promoter-TSS (NM_147102)	promoter-TSS (NM_147102)	-642	NM_147102	259106	Mm.377848	NM_147102	ENSMUSG00000073973	Olfr552	MOR28-1	olfactory receptor 552	protein-coding
unique_peak2-37780-1-5--2.2120195109379-1.32905871926422	chr5	117369929	117370351	+	0	NA	Intergenic	RLTR46|LTR|ERVK	195862	NM_001122666	71954	Mm.34456	NM_178622	ENSMUSG00000066900	Suds3	2400003N08Rik|2410008L21Rik|AU067672|mSds3	suppressor of defective silencing 3 homolog (S. cerevisiae)	protein-coding
unique_peak2-39470-6-7--0.434601889619698-0.97990265578305	chr9	56128655	56129095	+	0	NA	intron (NM_172924, intron 3 of 6)	intron (NM_172924, intron 3 of 6)	-119998	NM_019793	56434	Mm.28484	NM_019793	ENSMUSG00000032324	Tspan3	1700055K04Rik|TM4-A|Tm4sf8	tetraspanin 3	protein-coding
common_peak1-14536-24-9-1.47128180788035-2.52428350728854	chr3	30878771	30879636	+	0	NA	Intergenic	PB1D9|SINE|Alu	-10866	NM_001165956	241915	Mm.233173	NM_153421	ENSMUSG00000037652	Phc3	E030046K01Rik|Edr3|Hph3	polyhomeotic-like 3 (Drosophila)	protein-coding
common_peak2-22377-16-24--0.525592547506663-0.561823156887258	chr13	30136007	30136958	+	0	NA	Intergenic	Intergenic	-58550	NM_010093	13557	Mm.268356	NM_010093	ENSMUSG00000016477	E2f3	E2F3b|E2f3a	E2F transcription factor 3	protein-coding
common_peak1-12968-12-7-0.648775985087639-0.697979855752659	chr19	3829358	3830125	+	0	NA	Intergenic	Intergenic	-22032	NM_001271496	12660	Mm.225505	NM_013490	ENSMUSG00000024843	Chka	CK|CK/EK-alpha|Chetk-alpha|Chk|ChoK|EK|EtnK-alpha	choline kinase alpha	protein-coding
unique_peak2-39034-4-6--0.830815435910851-0.989110657569874	chr8	64826619	64826949	+	0	NA	Intergenic	Intergenic	-224794	NM_011922	26359	Mm.42179	NM_011922	ENSMUSG00000031635	Anxa10	-	annexin A10	protein-coding
common_peak2-25040-10-9-0.0344872501214071-1.05503135781948	chr18	31634333	31634729	+	0	NA	Intergenic	Intergenic	-27462	NM_009308	20983	Mm.233846	NM_009308	ENSMUSG00000024261	Syt4	SytIV	synaptotagmin IV	protein-coding
unique_peak1-2341-14-3-1.89921616035764-2.80787975886178	chr15	85345785	85346492	+	0	NA	Intergenic	Intergenic	-12481	NM_001256072	328577	Mm.212960	NM_001256072	ENSMUSG00000096607	7530416G11Rik	-	RIKEN cDNA 7530416G11 gene	protein-coding
common_peak1-9701-23-41--0.67054991826968-1.0364730969458	chr12	25098182	25099097	+	0	NA	Intergenic	Intergenic	-84807	NM_020614	21340	Mm.39082	NM_020614	ENSMUSG00000059669	Taf1b	4930408G01Rik|A230108M10Rik|TAFI68|Tafi86	TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B	protein-coding
common_peak1-13627-9-20--1.20270401637454-1.23014042908325	chr2	25254781	25255410	+	0	NA	intron (NM_009849, intron 6 of 8)	intron (NM_009849, intron 6 of 8)	-3475	NM_008721	18146	Mm.1131	NM_008721	ENSMUSG00000015094	Npdc1	AI314472|NPDC-1	neural proliferation, differentiation and control 1	protein-coding
common_peak1-14482-294-417-0.405261219430578-4.51242812832379	chr3	145649089	145654259	+	0	NA	exon (NM_001166064, exon 1 of 7)	exon (NM_001166064, exon 1 of 7)	840	NM_001166064	214804	Mm.268854	NM_001166064	ENSMUSG00000036863	Syde2	C430017H16Rik	synapse defective 1, Rho GTPase, homolog 2 (C. elegans)	protein-coding
unique_peak2-35419-4-8--1.19338551529556-1.21878474469819	chr17	33978937	33979454	+	0	NA	promoter-TSS (NM_019421)	promoter-TSS (NM_019421)	-841	NM_019421	54219	Mm.11175	NM_019421	ENSMUSG00000002308	Cd320	425O18-1|8D6|CD320-002|D17Ertd716e|NG29|VLDL	CD320 antigen	protein-coding
unique_peak2-37262-1-6--2.43441193227435-1.56314192529759	chr4	106995767	106996113	+	0	NA	intron (NM_001205156, intron 3 of 8)	ORR1A4|LTR|MaLR	8972	NM_001205156	230584	Mm.29118	NM_145550	ENSMUSG00000057375	Yipf1	C030002N13Rik	Yip1 domain family, member 1	protein-coding
common_peak2-27941-16-14-0.211373046659543-0.364171515310935	chr4	28989651	28990405	+	0	NA	Intergenic	Intergenic	249733	NM_001122889	13841	Mm.257266	NM_010141	ENSMUSG00000028289	Epha7	Cek11|Ebk|Ehk3|Hek11|Mdk1	Eph receptor A7	protein-coding
common_peak2-26402-8-4-0.683294323060208-1.21878474469819	chr2	58562863	58563257	+	0	NA	intron (NM_001289660, intron 1 of 7)	intron (NM_001289660, intron 1 of 7)	-44535	NM_001289659	76654	Mm.200370	NM_029692	ENSMUSG00000026839	Upp2	1700124F02Rik|AI266885|UDRPASE2|UP2|UPASE2	uridine phosphorylase 2	protein-coding
common_peak1-17698-125-220--0.164077180331881-0.576639598206462	chr7	73557156	73558741	+	0	NA	intron (NM_053080, intron 3 of 12)	intron (NM_053080, intron 3 of 12)	14415	NM_053080	56847	Mm.140988	NM_053080	ENSMUSG00000015134	Aldh1a3	ALDH6|RALDH3|V1	aldehyde dehydrogenase family 1, subfamily A3	protein-coding
common_peak2-29857-8-6-0.197867495889966-1.03789460276074	chr6	99914893	99915243	+	0	NA	Intergenic	Intergenic	-238682	NM_001170419	50501	Mm.87365	NM_015768	ENSMUSG00000030069	Prok2	Bv8|PK2|Prok1	prokineticin 2	protein-coding
unique_peak2-38788-7-8--0.370834171144123-1.00793137938329	chr7	128530971	128531355	+	0	NA	Intergenic	B3|SINE|B2	-4647	NM_001081327	195646	Mm.247449	NM_177575	ENSMUSG00000046321	Hs3st2	6430516N12Rik|A830061E14Rik|AW491345	heparan sulfate (glucosamine) 3-O-sulfotransferase 2	protein-coding
unique_peak1-3018-10-0-3.35641534500877-3.31132995230379	chr17	88063293	88063860	+	0	NA	Intergenic	RLTR9B2|LTR|ERVK	-8321	NM_008628	17685	Mm.4619	NM_008628	ENSMUSG00000024151	Msh2	AI788990	mutS homolog 2 (E. coli)	protein-coding
unique_peak1-6549-11-4-1.18676548936425-1.68134727924692	chr7	128317316	128317832	+	0	NA	Intergenic	Intergenic	90622	NM_139310	246190	Mm.221073	NM_139310	ENSMUSG00000034990	Otoa	-	otoancorin	protein-coding
unique_peak2-38435-11-21--0.950738034385684-0.991115276827166	chr7	27227866	27228826	+	0	NA	intron (NM_172896, intron 2 of 10)	Lx6|LINE|L1	8214	NM_172896	243880	Mm.322356	NM_172896	ENSMUSG00000040601	Nlrp4a	E330021B02|E330028A19Rik|NALP4|Nalp-eta|Nalp-ita|Nalp4a	NLR family, pyrin domain containing 4A	protein-coding
unique_peak1-3172-9-1-2.18961340640422-2.31132995230379	chr18	39014542	39015066	+	0	NA	intron (NM_010197, intron 2 of 3)	intron (NM_010197, intron 2 of 3)	-37306	NM_001033789	545253	Mm.244585	NM_001033789		Gm5820	EG545253	predicted gene 5820	protein-coding
unique_peak2-39890-4-9--1.34538860874061-1.36011389749466	chrX	75764162	75764680	+	0	NA	intron (NM_027322, intron 2 of 3)	intron (NM_027322, intron 2 of 3)	64723	NM_001164275	546336	Mm.211712	NM_027322	ENSMUSG00000047996	Prrg1	2010007L08Rik	proline rich Gla (G-carboxyglutamic acid) 1	protein-coding
common_peak2-26022-10-14--0.550475250599749-0.446472590016315	chr19	59075049	59075694	+	0	NA	intron (NM_175172, intron 13 of 14)	intron (NM_175172, intron 13 of 14)	57456	NM_178689	226265	Mm.103154	NM_178689	ENSMUSG00000048029	Eno4	6430537H07Rik	enolase 4	protein-coding
common_peak1-14032-87-119-0.0887465101726503-0.372255990168206	chr2	117120466	117122056	+	0	NA	intron (NM_011246, intron 6 of 16)	intron (NM_011246, intron 6 of 16)	45786	NM_026620	68215	Mm.219389	NM_026620	ENSMUSG00000027349	Fam98b	2610510H03Rik	family with sequence similarity 98, member B	protein-coding
common_peak1-10995-22-24-0.00342791531268016-0.305461879681376	chr15	36762055	36762856	+	0	NA	Intergenic	Intergenic	-35771	NM_001253806	22631	Mm.3360	NM_011740	ENSMUSG00000022285	Ywhaz	1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	protein-coding
common_peak2-23916-15-15-0.0121647505556561-0.30803596071496	chr16	8637614	8638284	+	0	NA	promoter-TSS (NM_025708)	promoter-TSS (NM_025708)	149	NM_016881	54128	Mm.9699	NM_016881	ENSMUSG00000022711	Pmm2	AI585868|C86848	phosphomannomutase 2	protein-coding
common_peak1-16948-10-10--0.103016273628528-0.301029995663987	chr6	84243627	84244119	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	129959	NR_046063	100038556	Mm.387783	NR_046063		Gm10445	ENSMUSG00000072956	predicted gene 10445	ncRNA
common_peak1-9293-73-50-1.01996966445373-4.37156477859418	chr11	88613263	88615880	+	0	NA	Intergenic	Intergenic	34614	NR_038058	193280	Mm.396842	NR_038058		C030037D09Rik	9330160M04	RIKEN cDNA C030037D09 gene	ncRNA
common_peak2-23611-23-27--0.0855874175485232-0.30512735654709	chr15	81694082	81694983	+	0	NA	TTS (NM_026737)	TTS (NM_026737)	-5776	NM_020507	57259	Mm.323595	NM_020507	ENSMUSG00000048546	Tob2	2900090N22Rik|4930545K18Rik|AV071822|mKIAA1663	transducer of ERBB2, 2	protein-coding
common_peak1-11806-8-8--0.164702583494742-1.00793137938329	chr16	58670200	58670866	+	0	NA	5' UTR (NM_007757, exon 1 of 7)	5' UTR (NM_007757, exon 1 of 7)	212	NM_007757	12892	Mm.291519	NM_007757	ENSMUSG00000022742	Cpox	CPX|Cpo|HCP|cac|nct	coproporphyrinogen oxidase	protein-coding
common_peak1-15829-32-32-0.234697899861207-0.451135909022752	chr5	125140735	125141854	+	0	NA	intron (NM_011596, intron 9 of 19)	intron (NM_011596, intron 9 of 19)	61661	NM_011596	21871	Mm.1158	NM_011596		Atp6v0a2	8430408C20Rik|AI385560|ATP6a2|AW489264|Atp6n1d|Atp6n2|C76904|ISF|J6B7|SHIF|Stv1|TJ6M|TJ6s|Tj6|V-ATPase 116 kDa|V-ATPase a2	ATPase, H+ transporting, lysosomal V0 subunit A2	protein-coding
common_peak1-17035-33-19-1.00940946763817-1.9602491241746	chr6	91737814	91738924	+	0	NA	exon (NM_001159507, exon 2 of 24)	exon (NM_001159507, exon 2 of 24)	19018	NM_001159507	243547	Mm.333264	NM_001033353	ENSMUSG00000030098	Grip2	-	glutamate receptor interacting protein 2	protein-coding
common_peak2-30370-34-54--0.399291186523394-0.62760443475974	chr7	28825179	28826223	+	0	NA	Intergenic	URR1B|DNA|MER1_type	9410	NM_011874	23996	Mm.29582	NM_011874	ENSMUSG00000030603	Psmc4	CIP21|MIP224	proteasome (prosome, macropain) 26S subunit, ATPase, 4	protein-coding
common_peak2-28148-12-30--1.30542032529924-1.80107744087172	chr4	103114266	103115006	+	0	NA	intron (NR_040673, intron 3 of 3)	intron (NR_040673, intron 3 of 3)	59531	NR_040673	622167	Mm.244115	NR_040673	ENSMUSG00000086136	Gm12718	OTTMUSG00000008109	predicted gene 12718	ncRNA
common_peak1-17050-26-34--0.201383924786504-0.35535220421655	chr6	97204917	97205725	+	0	NA	Intergenic	Intergenic	-2547	NM_001081157	320502	Mm.68163	NM_001081157	ENSMUSG00000044086	Lmod3	5430424A14Rik	leiomodin 3 (fetal)	protein-coding
common_peak2-25196-24-24-0.149353712992992-0.367910579842133	chr18	60525533	60526554	+	0	NA	Intergenic	ORR1B2-int|LTR|MaLR	-9640	NM_021792	60440	Mm.261140	NM_021792	ENSMUSG00000054072	Iigp1	2900074L10Rik|AI046432|AW111922|Ifgga1|Iigp|Irga6	interferon inducible GTPase 1	protein-coding
unique_peak1-7302-9-1-2.18961340640422-2.31132995230379	chr9	116241466	116241994	+	0	NA	Intergenic	ID_B1|SINE|B4	-157249	NM_009371	21813	Mm.172346	NM_009371	ENSMUSG00000032440	Tgfbr2	1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII	transforming growth factor, beta receptor II	protein-coding
common_peak2-29446-25-44--0.630003190984569-0.975110594803311	chr6	17463542	17464556	+	0	NA	intron (NM_008591, intron 4 of 21)	intron (NM_008591, intron 4 of 21)	50092	NM_008591	17295	Mm.86844	NM_008591	ENSMUSG00000009376	Met	AI838057|HGF|HGFR|Par4|c-Met	met proto-oncogene	protein-coding
common_peak2-25711-197-255-0.41484261368802-3.00512585331604	chr19	21271309	21273348	+	0	NA	Intergenic	PB1D10|SINE|Alu	-74440	NM_009551	22682	Mm.292405	NM_009551		Zfand5	2310057A04Rik|5830475F03Rik|AA415485|Za20d2|Zfp216	zinc finger, AN1-type domain 5	protein-coding
common_peak1-17492-15-8-0.842239749113344-0.891319708951327	chr7	25153984	25154759	+	0	NA	promoter-TSS (NM_008433)	promoter-TSS (NM_008433)	-911	NM_001163510	16534	Mm.9911	NM_008433	ENSMUSG00000054342	Kcnn4	IK1|IKCA1|KCA4|KCa3.1|SK4|SKCas|mIKCa1	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4	protein-coding
common_peak2-28564-33-38-0.0459353436632801-0.312166972154323	chr5	5558865	5560026	+	0	NA	promoter-TSS (NM_153116)	promoter-TSS (NM_153116)	56	NM_153116	207704	Mm.323984	NM_153116	ENSMUSG00000040464	Gtpbp10	4930545J22Rik|BC034507	GTP-binding protein 10 (putative)	protein-coding
unique_peak1-1587-11-5-0.923731083530457-1.477227296591	chr13	34148807	34149510	+	0	NA	intron (NM_026512, intron 4 of 6)	intron (NM_026512, intron 4 of 6)	19648	NM_026512	68021	Mm.140243	NM_026512	ENSMUSG00000038286	Bphl	2010012D11Rik|5730533B08Rik|AI115341	biphenyl hydrolase-like (serine hydrolase, breast epithelial mucin-associated antigen)	protein-coding
unique_peak2-33830-9-25--1.51082631173687-2.00244947055753	chr12	8809277	8810152	+	0	NA	Intergenic	Intergenic	31512	NM_011519	20969	Mm.2580	NM_011519	ENSMUSG00000020592	Sdc1	AA408134|AA409076|CD138|Sstn|Synd|Synd1|syn-1	syndecan 1	protein-coding
common_peak1-19162-17-12-0.517856620063946-0.647240723060192	chr9	95816309	95817120	+	0	NA	intron (NM_019864, intron 29 of 46)	intron (NM_019864, intron 29 of 46)	-38465	NM_011916	24127	Mm.291179	NM_011916	ENSMUSG00000032410	Xrn1	Dhm2|exo|mXrn1	5'-3' exoribonuclease 1	protein-coding
common_peak2-21924-13-18--0.469455482805817-0.409888142029227	chr12	17728922	17729640	+	0	NA	intron (NM_016677, intron 1 of 3)	MTC|LTR|MaLR	31661	NM_016677	53602	Mm.313619	NM_016677	ENSMUSG00000071379	Hpcal1	NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3	hippocalcin-like 1	protein-coding
unique_peak1-5592-9-2-1.60465090568306-1.87199725847353	chr6	17497742	17498275	+	0	NA	intron (NM_008591, intron 13 of 21)	L1MB4|LINE|L1	84051	NM_008591	17295	Mm.86844	NM_008591	ENSMUSG00000009376	Met	AI838057|HGF|HGFR|Par4|c-Met	met proto-oncogene	protein-coding
common_peak1-8278-46-44-0.406142846919127-0.83767504605574	chr10	25928618	25930526	+	0	NA	Intergenic	Intergenic	-19941	NM_001013766	268288	Mm.213322	NM_001013766	ENSMUSG00000051354	Samd3	Gm623	sterile alpha motif domain containing 3	protein-coding
unique_peak2-32989-4-7--1.02346051385325-1.09384600808989	chr10	59951382	59951741	+	0	NA	intron (NR_045556, intron 10 of 68)	MER113|DNA|MER1_type	89087	NM_001164374	100302688	Mm.444135	NM_001164374	ENSMUSG00000090439	Gm17455	-	predicted gene, 17455	protein-coding
common_peak2-26856-24-17-0.623284901325404-0.890873221665474	chr2	155236350	155236978	+	0	NA	intron (NM_019825, intron 9 of 13)	intron (NM_019825, intron 9 of 13)	29072	NM_178111	68728	Mm.293605	NM_178111	ENSMUSG00000038375	Trp53inp2	1110029F20Rik|Tp53inp2	transformation related protein 53 inducible nuclear protein 2	protein-coding
common_peak2-31760-10-8-0.186490343566457-1.078512453669	chr9	21181519	21181893	+	0	NA	intron (NM_001277322, intron 2 of 21)	(TTTG)n|Simple_repeat|Simple_repeat	8730	NM_001277322	16201	Mm.440026	NM_010561	ENSMUSG00000032178	Ilf3	MBII-26|MPHOSPH4|NF90|NFAR	interleukin enhancer binding factor 3	protein-coding
common_peak1-13244-129-120-0.759657084691475-5.18497731046836	chr19	30029682	30031586	+	0	NA	intron (NM_001164724, intron 6 of 7)	GA-rich|Low_complexity|Low_complexity	10354	NM_001164724	77125	Mm.182359	NM_133775	ENSMUSG00000024810	Il33	9230117N10Rik|Il-33|Il1f11|NF-HEV	interleukin 33	protein-coding
common_peak1-18840-14-14--0.00767443525087419-0.308519316180257	chr9	15239011	15239554	+	0	NA	Intergenic	RMER16-int|LTR|ERVK	-70657	NM_133214	170748	Mm.86572	NM_133214	ENSMUSG00000058173	Smco4	Fn5	single-pass membrane protein with coiled-coil domains 4	protein-coding
common_peak2-24641-43-69--0.346719831421264-0.644995680934529	chr17	35089038	35089885	+	0	NA	promoter-TSS (NR_027943)	promoter-TSS (NR_027943)	-45	NR_015536	68763	Mm.28895	NR_015536	ENSMUSG00000092203	1110038B12Rik	0610009C20Rik|0910001G04Rik	RIKEN cDNA 1110038B12 gene	ncRNA
unique_peak1-4249-9-2-1.60465090568306-1.87199725847353	chr2	128378161	128378679	+	0	NA	Intergenic	ORR1E|LTR|MaLR	-123333	NR_028590	100043424	Mm.297222	NR_028589		Gm14005	OTTMUSG00000015351	predicted gene 14005	ncRNA
common_peak1-19397-19-58--1.47995572270016-4.21528825723629	chrX	52988039	52988713	+	0	NA	Intergenic	L1_Mm|LINE|L1	183603	NM_001220497	100039055	Mm.380174	NM_001220497		Gm16404	EG625711	predicted gene 16404	protein-coding
unique_peak2-34428-7-11--0.785871670422967-1.21681515183528	chr14	20661290	20661892	+	0	NA	intron (NR_105025, intron 2 of 2)	RLTR6-int|LTR|ERV1	3444	NR_105025	52512	Mm.483998	NR_105025		D14Ertd670e	-	DNA segment, Chr 14, ERATO Doi 670, expressed	ncRNA
common_peak2-21438-47-62--0.042438498733369-0.302795439836264	chr11	86587232	86588696	+	0	NA	intron (NM_026191, intron 14 of 17)	B1_Mus1|SINE|Alu	-16970	NM_001003908	67300	Mm.254588	NM_001003908	ENSMUSG00000047126	Cltc	3110065L21Rik|CHC|R74732	clathrin, heavy polypeptide (Hc)	protein-coding
common_peak2-20626-11-17--0.661231417190699-0.58239619684445	chr10	80398909	80399456	+	0	NA	Intergenic	Intergenic	6346	NM_008655	17873	Mm.1360	NM_008655	ENSMUSG00000015312	Gadd45b	AI323528|Myd118	growth arrest and DNA-damage-inducible 45 beta	protein-coding
unique_peak2-32537-2-9--2.23938235115068-1.87199725847353	chr1	66846034	66846680	+	0	NA	intron (NM_001122738, intron 2 of 14)	Lx7|LINE|L1	17812	NM_177645	68691	Mm.240912	NM_177645	ENSMUSG00000026004	Kansl1l	1110028C15Rik|1190030G24|AI427598|C430010P07Rik|mKIAA4189	KAT8 regulatory NSL complex subunit 1-like	protein-coding
common_peak2-23031-24-21-0.333778284130419-0.518921928796332	chr14	65889755	65890652	+	0	NA	intron (NM_015795, intron 2 of 7)	intron (NM_015795, intron 2 of 7)	4665	NM_015795	50759	Mm.65308	NM_015795	ENSMUSG00000034532	Fbxo16	4932435C24Rik|Fbx16	F-box protein 16	protein-coding
common_peak1-10918-19-8-1.23276232521937-1.61268301619756	chr15	6642519	6643371	+	0	NA	Intergenic	L1ME1|LINE|L1	-15436	NM_030168	78757	Mm.275811	NM_030168	ENSMUSG00000050310	Rictor	4921505C17Rik|6030405M08Rik|AVO3|AW492497|D530039E11Rik	RPTOR independent companion of MTOR, complex 2	protein-coding
common_peak1-14838-33-42--0.0949271921765691-0.311623594475992	chr3	94442989	94444117	+	0	NA	intron (NM_011656, intron 1 of 12)	intron (NM_011656, intron 1 of 12)	19241	NM_001293728	22156	Mm.10214	NM_011656	ENSMUSG00000005968	Tuft1	-	tuftelin 1	protein-coding
common_peak1-17447-51-56-0.242033811437832-0.514932048590334	chr7	16613956	16615323	+	0	NA	Intergenic	ZP3AR|Satellite|Satellite	-29795	NM_001081418	243842	Mm.440249	NM_001081418	ENSMUSG00000070808	Gltscr1	-	glioma tumor suppressor candidate region gene 1	protein-coding
unique_peak1-6756-8-6-0.197867495889966-1.03789460276074	chr8	56221496	56222063	+	0	NA	Intergenic	Intergenic	181698	NM_001253756	234267	Mm.241700	NM_153581	ENSMUSG00000031517	Gpm6a	Gpm6|M6A	glycoprotein m6a	protein-coding
unique_peak1-6319-7-2-1.21412832957703-1.45399745587252	chr7	45325105	45325592	+	0	NA	Intergenic	Intergenic	1194556	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak1-17501-17-20--0.174021084573723-0.306598483909156	chr7	25377543	25378272	+	0	NA	intron (NM_023154, intron 1 of 7)	intron (NM_023154, intron 1 of 7)	-5247	NM_001033205	101544	Mm.20117	NM_001033205	ENSMUSG00000066721	Zfp575	AI326876|Znf575	zinc finger protein 575	protein-coding
unique_peak2-35640-1-6--2.43441193227435-1.56314192529759	chr17	88497928	88498300	+	0	NA	Intergenic	Intergenic	-26738	NM_001190356	225058	Mm.312053	NM_001190356		Gm4832	EG225058	predicted gene 4832	protein-coding
unique_peak2-39366-14-26--0.855671341805824-0.949797625454538	chr9	13299119	13300160	+	0	NA	Intergenic	Intergenic	65058	NR_028271	18689	Mm.41972	NM_008835		Phxr4	Sp5	per-hexamer repeat gene 4	ncRNA
common_peak2-26584-28-20-0.660641697042702-1.00055860626307	chr2	106973830	106974532	+	0	NA	Intergenic	MLT1C|LTR|MaLR	-74373	NM_008045	14308	Mm.249525	NM_008045	ENSMUSG00000027120	Fshb	FSH|Fshbeta	follicle stimulating hormone beta	protein-coding
common_peak1-19100-66-114--0.327006386518534-0.81219487454745	chr9	72274387	72276024	+	0	NA	Intergenic	Intergenic	-11131	NM_008613	17427	Mm.387671	NM_008613		Mns1	AW546487	meiosis-specific nuclear structural protein 1	protein-coding
unique_peak2-36752-3-7--1.41398308995928-1.23214870625617	chr3	60527953	60528397	+	0	NA	Intergenic	Intergenic	223001	NM_001253708	56758	Mm.255723	NM_020007	ENSMUSG00000027763	Mbnl1	Mbnl|mKIAA0428	muscleblind-like 1 (Drosophila)	protein-coding
common_peak2-28525-10-14--0.550475250599749-0.446472590016315	chr5	122371530	122372128	+	0	NA	intron (NM_007804, intron 3 of 22)	PB1D10|SINE|Alu	72792	NM_175474	231717	Mm.12654	NM_175474	ENSMUSG00000044134	Fam109a	A230106M15Rik|AU017694|IPIP27A|Ses1	family with sequence similarity 109, member A	protein-coding
common_peak2-27768-43-51-0.082123467382611-0.333814721158537	chr3	131364273	131365776	+	0	NA	Intergenic	Intergenic	136028	NM_001289477	23971	Mm.244912	NM_011863	ENSMUSG00000028032	Papss1	AI325286|Asapk|SK1	3'-phosphoadenosine 5'-phosphosulfate synthase 1	protein-coding
common_peak1-7973-9-8-0.0196884049619079-1.03275496310833	chr1	157062318	157062871	+	0	NA	Intergenic	Intergenic	56761	NM_021433	58244	Mm.66264	NM_021433	ENSMUSG00000026470	Stx6	2310039E05Rik|2410005I16Rik|AA437559|AI415714|AI845861	syntaxin 6	protein-coding
common_peak2-31085-36-67--0.608141755082585-1.2455458718154	chr8	25097905	25099344	+	0	NA	intron (NM_177086, intron 5 of 6)	intron (NM_177086, intron 5 of 6)	318491	NM_177086	320158	Mm.121274	NM_177086	ENSMUSG00000037492	Zmat4	9630048M01Rik	zinc finger, matrin type 4	protein-coding
common_peak2-20620-10-17--0.813509656433543-0.699649909729472	chr10	80179178	80179986	+	0	NA	intron (NM_007460, intron 14 of 30)	intron (NM_007460, intron 14 of 30)	14144	NM_027829	71564	Mm.35802	NM_027829	ENSMUSG00000055862	Izumo4	9030607L17Rik|AI550407	IZUMO family member 4	protein-coding
common_peak1-14525-16-34--1.0110193746769-1.55539563639961	chr3	27938204	27938854	+	0	NA	intron (NM_008875, intron 6 of 25)	intron (NM_008875, intron 6 of 25)	55436	NM_008875	18805	Mm.212039	NM_008875	ENSMUSG00000027695	Pld1	AA536939|C85393|Pld1a|Pld1b	phospholipase D1	protein-coding
common_peak2-32323-29-29-0.205399485006592-0.423354874519384	chrX	73474571	73475714	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-34503	NM_001013760	238829	Mm.292319	NM_001013760	ENSMUSG00000071738	Gm4937	EG238829	predicted gene 4937	protein-coding
unique_peak2-38385-3-7--1.41398308995928-1.23214870625617	chr7	17539617	17540002	+	0	NA	Intergenic	RSINE1|SINE|B4	-5335	NM_001007569	71691	Mm.275673	NM_001007569	ENSMUSG00000041141	Pnmal1	0710005I19Rik	PNMA-like 1	protein-coding
common_peak2-23765-49-84--0.403107113112518-0.889713839646341	chr15	98566893	98569066	+	0	NA	TTS (NM_007478)	TTS (NM_007478)	-9350	NM_024169	66120	Mm.30729	NM_024169	ENSMUSG00000003355	Fkbp11	1110002O23Rik|FKBP-11	FK506 binding protein 11	protein-coding
common_peak1-14963-11-15--0.491306415748387-0.435191258261915	chr3	105053248	105053880	+	0	NA	Intergenic	L1Md_F2|LINE|L1	183802	NM_029228	75269	Mm.307994	NM_029228	ENSMUSG00000051788	4930564D02Rik	-	RIKEN cDNA 4930564D02 gene	protein-coding
common_peak1-10946-16-31--0.881736357731938-1.20073456579999	chr15	25412107	25412789	+	0	NA	Intergenic	Intergenic	68501	NR_027376	432939	Mm.146555	NM_001013791		Gm5468	100040583|EG432939	predicted gene 5468	ncRNA
common_peak2-31459-11-34--1.62058943269335-2.97841939682983	chr8	105565392	105566024	+	0	NA	Intergenic	Intergenic	-256697	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
unique_peak1-2691-9-4-0.867685311516858-1.36011389749466	chr16	77717165	77717693	+	0	NA	Intergenic	Intergenic	70911	NR_029540	723952		NR_029540	miRBase:MI0000152	Mir125b-2	Mirn125b-2|mir-125b-2	microRNA 125b-2	ncRNA
common_peak1-13328-71-85-0.218179424017873-0.565418124657885	chr19	43550117	43552117	+	0	NA	intron (NM_031396, intron 6 of 10)	intron (NM_031396, intron 6 of 10)	36191	NM_031396	83674	Mm.329864	NM_031396	ENSMUSG00000025189	Cnnm1	AI846314|Acdp1|CLP-1	cyclin M1	protein-coding
unique_peak2-39916-2-10--2.37688587490062-2.09384600808989	chrX	101274311	101274744	+	0	NA	3' UTR (NM_001077354, exon 5 of 5)	3' UTR (NM_001077354, exon 5 of 5)	37086	NR_030430	751535		NR_030430	miRBase:MI0004258	Mir672	Mirn672|mmu-mir-672	microRNA 672	ncRNA
unique_peak2-37184-6-6--0.241956811677302-0.947717972411649	chr4	54949063	54949289	+	0	NA	Intergenic	Intergenic	-11641	NM_172867	242466	Mm.102904	NM_172867	ENSMUSG00000060206	Zfp462	6030417H05|9430078C22Rik|Gt4-2|Zfpip	zinc finger protein 462	protein-coding
unique_peak1-927-9-3-1.18961340640422-1.57096726280955	chr11	51856610	51857130	+	0	NA	intron (NM_001166654, intron 13 of 13)	intron (NM_001166654, intron 13 of 13)	39147	NM_001166653	213084	Mm.280557	NM_153785	ENSMUSG00000020389	Cdkl3	AI852479|B230379H01Rik	cyclin-dependent kinase-like 3	protein-coding
unique_peak2-35619-5-12--1.40482005414695-1.62698961692433	chr17	84879465	84880008	+	0	NA	Intergenic	Intergenic	-14188	NM_183021	240174	Mm.246767	NM_177826	ENSMUSG00000024251	Thada	6530405K19|A930021O22|AU019899|BC052885|GITA	thyroid adenoma associated	protein-coding
unique_peak2-33798-9-11--0.395349094316936-0.344532117358383	chr11	120484714	120485140	+	0	NA	intron (NM_153056, intron 3 of 9)	B4A|SINE|B4	1263	NR_105901	102465565		NR_105901		Mir6936	mmu-mir-6936	microRNA mir-6936	ncRNA
common_peak1-7951-9-8-0.0196884049619079-1.03275496310833	chr1	153202019	153202630	+	0	NA	3' UTR (NM_001039511, exon 8 of 8)	3' UTR (NM_001039511, exon 8 of 8)	10696	NM_001039511	117198	Mm.33764	NM_028582	ENSMUSG00000023150	Ivns1abp	1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850	influenza virus NS1A binding protein	protein-coding
common_peak1-9960-49-40-0.6487318184071-1.51460024573214	chr12	112576200	112577956	+	0	NA	intron (NM_183016, intron 4 of 36)	intron (NM_183016, intron 4 of 36)	38851	NM_183016	217866	Mm.27397	NM_183016	ENSMUSG00000021279	Cdc42bpb	MRCKb	CDC42 binding protein kinase beta	protein-coding
unique_peak2-37732-13-11-0.193509529916613-0.379391706698377	chr5	109866347	109867004	+	0	NA	intron (NM_001104628, intron 5 of 5)	Lx4A|LINE|L1	17643	NM_001104628	384221	Mm.469879	NM_001104628	ENSMUSG00000091879	Vmn2r17	EG384221	vomeronasal 2, receptor 17	protein-coding
common_peak2-23819-71-127--0.355555821280029-1.0000419899553	chr15	101253332	101255036	+	0	NA	intron (NM_033073, intron 7 of 8)	B1_Mm|SINE|Alu	11350	NM_033073	110310	Mm.486285	NM_033073		Krt7	D15Wsu77e|K7|Krt2-7	keratin 7	protein-coding
common_peak1-8134-11-10-0.0492619656143161-0.31137425193576	chr1	189866794	189867394	+	0	NA	intron (NM_011935, intron 1 of 6)	intron (NM_011935, intron 1 of 6)	-34225	NR_038007	320272	Mm.446274	NR_038007		9330162B11Rik	-	RIKEN cDNA 9330162B11 gene	ncRNA
unique_peak1-1925-10-1-2.35641534500877-2.57096726280955	chr14	76596014	76596648	+	0	NA	Intergenic	Intergenic	85633	NM_013745	27275	Mm.21138	NM_013745	ENSMUSG00000022009	Nufip1	Nufip	nuclear fragile X mental retardation protein interacting protein 1	protein-coding
common_peak2-32145-4-5--0.608423014574403-0.909929411522249	chr9	108137225	108137612	+	0	NA	intron (NM_001276485, intron 1 of 2)	intron (NM_001276485, intron 1 of 2)	28728	NM_010017	13138	Mm.7524	NM_010017		Dag1	D9Wsu13e|DG|Dp427|Dp71	dystroglycan 1	protein-coding
common_peak1-11653-13-10-0.319040412000471-0.446472590016315	chr16	23402479	23403139	+	0	NA	Intergenic	RLTR23|LTR|ERV1	-26397	NM_001004151	239766	Mm.208751	NM_001004151	ENSMUSG00000033383	Rtp1	Gm1766|Gm604	receptor transporter protein 1	protein-coding
common_peak2-23041-17-21--0.24113528043226-0.322753776620787	chr14	69269201	69270308	+	0	NA	intron (NR_102399, intron 1 of 21)	intron (NR_102399, intron 1 of 21)	4145	NM_010082	13522	Mm.117450	NM_010082	ENSMUSG00000014725	Adam28	C130072N01Rik|D430033C21Rik|Dtgn1|MDC-L|MDC-Lm|MDC-Ls|MDCL|TECADAM|eMDCII	a disintegrin and metallopeptidase domain 28	protein-coding
common_peak2-20354-53-60-0.210235674853042-0.501837478813393	chr10	9528906	9530370	+	0	NA	intron (NM_001081344, intron 14 of 25)	Lx3A|LINE|L1	91200	NM_001081344	78808	Mm.331751	NM_030191	ENSMUSG00000019790	Stxbp5	0710001E20Rik|4930565N16Rik|AW742610|LGL3|mKIAA1006	syntaxin binding protein 5 (tomosyn)	protein-coding
unique_peak1-5830-8-1-2.00522241794757-2.05605744720049	chr6	72306557	72307077	+	0	NA	intron (NM_144916, intron 3 of 7)	intron (NM_144916, intron 3 of 7)	1340	NM_144916	232086	Mm.491165	NM_144916	ENSMUSG00000055912	Tmem150a	BC014685|Tmem150	transmembrane protein 150A	protein-coding
common_peak1-11867-27-20-0.599228528116475-0.90781512069806	chr16	92693094	92694418	+	0	NA	intron (NM_001111022, intron 3 of 6)	intron (NM_001111022, intron 3 of 6)	3818	NM_001111023	12394	Mm.4081	NM_009821	ENSMUSG00000022952	Runx1	AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b	runt related transcription factor 1	protein-coding
common_peak1-13477-58-26-1.54106243272703-6.38615039722466	chr2	13384500	13386149	+	0	NA	intron (NM_001081084, intron 14 of 66)	intron (NM_001081084, intron 14 of 66)	28179	NM_001081084	65969	Mm.313915	NM_001081084	ENSMUSG00000026726	Cubn	AA408369|AL022750|D2Wsu88e	cubilin (intrinsic factor-cobalamin receptor)	protein-coding
common_peak2-23695-11-17--0.661231417190699-0.58239619684445	chr15	88837160	88838072	+	0	NA	intron (NM_031260, intron 12 of 26)	intron (NM_031260, intron 12 of 26)	24192	NM_031260	83456	Mm.358791	NM_031260	ENSMUSG00000015365	Mov10l1	CHAMP|Csm	Moloney leukemia virus 10-like 1	protein-coding
common_peak1-12654-48-67--0.116535690015525-0.327760028623774	chr18	36319937	36320838	+	0	NA	intron (NM_001167891, intron 1 of 9)	intron (NM_001167891, intron 1 of 9)	36427	NM_001167891	100042150	Mm.380390	NM_001167891	ENSMUSG00000060275	Nrg2	Don1|NTAK	neuregulin 2	protein-coding
unique_peak2-34778-2-9--2.23938235115068-1.87199725847353	chr15	59598520	59598937	+	0	NA	Intergenic	IAP-d-int|LTR|ERVK	27786	NR_045076	100503021	Mm.402924	NR_045076		Gm19510	-	predicted gene, 19510	ncRNA
common_peak2-21879-15-11-0.4272022498345-0.503257505534083	chr12	87408152	87408729	+	0	NA	intron (NM_009368, intron 3 of 6)	intron (NM_009368, intron 3 of 6)	11551	NM_009368	21809	Mm.3992	NM_009368	ENSMUSG00000021253	Tgfb3	Tgfb-3	transforming growth factor, beta 3	protein-coding
unique_peak2-33887-8-26--1.7496650842159-2.47979361197949	chr12	36156159	36157297	+	0	NA	Intergenic	L1Md_F2|LINE|L1	62933	NM_013464	11622	Mm.341377	NM_013464	ENSMUSG00000019256	Ahr	Ah|Ahh|Ahre|In|bHLHe76	aryl-hydrocarbon receptor	protein-coding
common_peak1-15873-27-31--0.00845404910476422-0.304476922018591	chr5	5558805	5559688	+	0	NA	intron (NM_153116, intron 1 of 9)	intron (NM_153116, intron 1 of 9)	255	NM_153116	207704	Mm.323984	NM_153116	ENSMUSG00000040464	Gtpbp10	4930545J22Rik|BC034507	GTP-binding protein 10 (putative)	protein-coding
common_peak1-16005-10-16--0.73104749624157-0.604422558181019	chr5	34187219	34187763	+	0	NA	intron (NM_175231, intron 1 of 20)	intron (NM_175231, intron 1 of 20)	1730	NM_001081102	107823	Mm.19892	NM_175231	ENSMUSG00000057406	Whsc1	5830445G22Rik|9430010A17Rik|AW555663|C130020C13Rik|D030027O06Rik|D930023B08Rik|MMSET|NSD2|Whsc1l|mKIAA1090	Wolf-Hirschhorn syndrome candidate 1 (human)	protein-coding
common_peak1-7713-16-14-0.211373046659543-0.364171515310935	chr1	87551489	87552368	+	0	NA	intron (NM_013673, intron 1 of 19)	ORR1C1|LTR|MaLR	5303	NM_013673	20684	Mm.290906	NM_013673	ENSMUSG00000026222	Sp100	A430075G10Rik	nuclear antigen Sp100	protein-coding
common_peak2-21671-56-46-0.681006973761606-1.82508467444514	chr11	103311666	103312839	+	0	NA	Intergenic	Intergenic	-38274	NM_183034	353047	Mm.383308	NM_183034	ENSMUSG00000034247	Plekhm1	AP162|B2|BC038943|D330036J23Rik	pleckstrin homology domain containing, family M (with RUN domain) member 1	protein-coding
common_peak1-17784-28-33--0.0345037214288766-0.301029995664001	chr7	98164552	98165699	+	0	NA	Intergenic	Lx5|LINE|L1	-74171	NM_011807	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
common_peak2-31900-16-23--0.466698858453094-0.497202060940027	chr9	57644907	57645774	+	0	NA	intron (NM_019689, intron 4 of 7)	intron (NM_019689, intron 4 of 7)	-31673	NM_007713	102414	Mm.25720	NM_007713	ENSMUSG00000032316	Clk3	AI256811	CDC-like kinase 3	protein-coding
common_peak1-18668-31-26-0.470351168649655-0.720235944639222	chr8	117800973	117801941	+	0	NA	intron (NM_019573, intron 8 of 8)	intron (NM_019573, intron 8 of 8)	429337	NM_001025577	17132	Mm.275549	NM_001025577		Maf	2810401A20Rik|A230108G15Rik|AW047063|c-maf	avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog	protein-coding
unique_peak2-35705-5-11--1.28934283672701-1.477227296591	chr18	31935270	31935751	+	0	NA	intron (NM_153515, intron 5 of 7)	intron (NM_153515, intron 5 of 7)	-13303	NM_027002	69241	Mm.279898	NM_027002	ENSMUSG00000024258	Polr2d	2310002G05Rik|2610028L19Rik|HSRBP4|RBP4	polymerase (RNA) II (DNA directed) polypeptide D	protein-coding
common_peak1-15373-16-11-0.533301141546906-0.58239619684445	chr4	59332498	59333279	+	0	NA	intron (NM_001163288, intron 15 of 16)	B2_Mm2|SINE|B2	59965	NR_105031	101055769	Mm.421401	NR_105031		LOC101055769	-	uncharacterized LOC101055769	ncRNA
unique_peak1-2511-17-2-2.63333383748388-3.75443312462699	chr16	17220159	17221031	+	0	NA	Intergenic	Intergenic	12367	NM_001033338	239731	Mm.86671	NM_001033338	ENSMUSG00000071636	Rimbp3	Gm1759|Gm603|RIM-BP3|mKIAA1666	RIMS binding protein 3	protein-coding
common_peak2-27717-20-10-1.0286431659539-1.30248952876293	chr3	122509865	122510391	+	0	NA	intron (NM_153422, intron 11 of 20)	intron (NM_153422, intron 11 of 20)	-5230	NR_045168	71647	Mm.449992	NR_045168		4930447N08Rik	-	RIKEN cDNA 4930447N08 gene	ncRNA
unique_peak1-3043-10-2-1.77145284428761-2.09384600808989	chr18	5373198	5373702	+	0	NA	Intergenic	Intergenic	-39013	NM_178722	240186	Mm.118257	NM_178722	ENSMUSG00000050945	Zfp438	9430031G09|9430091M14Rik|B830013J05Rik	zinc finger protein 438	protein-coding
common_peak1-8835-17-25--0.482143379936054-0.479250674391597	chr11	23894461	23895294	+	0	NA	Intergenic	MTEa|LTR|MaLR	-83179	NM_016707	14025	Mm.53687	NM_016707	ENSMUSG00000000861	Bcl11a	2810047E18Rik|BCL-11A|Ctip1|D930021L15Rik|Evi9|Evi9a|Evi9b|Evi9c|mKIAA1809	B cell CLL/lymphoma 11A (zinc finger protein)	protein-coding
common_peak2-30310-33-32-0.286943443167075-0.49444889977478	chr7	19951636	19952586	+	0	NA	intron (NM_001010836, intron 1 of 12)	B4A|SINE|B4	5546	NM_001010836	333654	Mm.333640	NM_001010836	ENSMUSG00000040734	Ppp1r13l	AV260376|IASPP|Nkip1|wa3	protein phosphatase 1, regulatory (inhibitor) subunit 13 like	protein-coding
common_peak1-19215-10-32--1.68797877434968-2.93261892307636	chr9	106170879	106171299	+	0	NA	Intergenic	Intergenic	-12303	NM_027354	70235	Mm.23054	NM_027354	ENSMUSG00000023345	Poc1a	2510040D07Rik|Wdr51a	POC1 centriolar protein homolog A (Chlamydomonas)	protein-coding
common_peak2-24742-109-174--0.0650514299451279-0.332235163458577	chr17	48408819	48410921	+	0	NA	intron (NM_172623, intron 4 of 5)	intron (NM_172623, intron 4 of 5)	6209	NM_001163796	224840	Mm.131234	NM_172623	ENSMUSG00000051682	Treml4	5031403H21Rik|BB137214|IDCP1|TLT-4|TLT4|Treml3	triggering receptor expressed on myeloid cells-like 4	protein-coding
common_peak2-23286-18-16-0.225456309978012-0.397739447719379	chr15	28158894	28159651	+	0	NA	exon (NM_133365, exon 4 of 79)	exon (NM_133365, exon 4 of 79)	25751	NM_133365	110082	Mm.248464	NM_133365	ENSMUSG00000022262	Dnah5	AU022615|Dnahc5|Mdnah5|b2b1134Clo|b2b1154Clo|b2b1537Clo|b2b1565Clo|b2b601Clo|mKIAA1603	dynein, axonemal, heavy chain 5	protein-coding
common_peak1-15197-87-125-0.0183571822812523-0.308754782103517	chr3	159839025	159841904	+	0	NA	Intergenic	Intergenic	337805	NM_026582	68151	Mm.6766	NM_026582		Wls	5031439A09Rik|AI173978|AI987742|Gpr177	wntless homolog (Drosophila)	protein-coding
common_peak2-32139-37-61--0.428203238901056-0.759155512401768	chr9	106886492	106887264	+	0	NA	intron (NM_153413, intron 22 of 52)	intron (NM_153413, intron 22 of 52)	-92609	NM_029103	74840	Mm.29778	NM_029103	ENSMUSG00000032575	Manf	3230402M22Rik|AA407711|AA408789|AA673178|Armet|D17914|D18Mgi17	mesencephalic astrocyte-derived neurotrophic factor	protein-coding
common_peak1-8635-23-41--0.67054991826968-1.0364730969458	chr10	121739520	121740478	+	0	NA	Intergenic	Intergenic	-145556	NM_016847	54140	Mm.4351	NM_016847	ENSMUSG00000020123	Avpr1a	AVPR|Avpr1|V1a|V1aR	arginine vasopressin receptor 1A	protein-coding
unique_peak2-35223-5-15--1.70438033600585-1.4372489031793	chr16	91931131	91931813	+	0	NA	intron (NM_138597, intron 1 of 6)	intron (NM_138597, intron 1 of 6)	403	NM_138597	28080	Mm.41	NM_138597	ENSMUSG00000022956	Atp5o	ATPO|D12Wsu28e|OSCP	ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	protein-coding
common_peak2-31966-10-6-0.549060422951165-1.21398586181642	chr9	66988483	66988815	+	0	NA	intron (NR_045748, intron 1 of 2)	(TG)n|Simple_repeat|Simple_repeat	7281	NR_045748	100502636	Mm.412607	NR_045748		Gm19299	-	predicted gene, 19299	ncRNA
unique_peak1-3710-10-3-1.35641534500877-1.75805390616669	chr19	44379787	44380249	+	0	NA	3' UTR (NM_009128, exon 6 of 6)	3' UTR (NM_009128, exon 6 of 6)	2357	NR_039574	100628619		NR_039574		Mir5114	mmu-mir-5114|mu-mir-5114	microRNA 5114	ncRNA
common_peak1-11912-50-82--0.334099114867972-0.677371116707613	chr17	29031938	29033325	+	0	NA	TTS (NM_172450)	TTS (NM_172450)	-9579	NR_045457	74179	Mm.248931	NR_045457	ENSMUSG00000085333	1700030A11Rik	-	RIKEN cDNA 1700030A11 gene	ncRNA
common_peak2-29198-16-17--0.0516613591742505-0.301029995663984	chr5	136171536	136172346	+	0	NA	intron (NM_008898, intron 1 of 15)	intron (NM_008898, intron 1 of 15)	6857	NM_008898	18984	Mm.3863	NM_008898	ENSMUSG00000005514	Por	4933424M13Rik|CPR|CYPOR	P450 (cytochrome) oxidoreductase	protein-coding
common_peak1-8324-22-50--1.02514123688409-2.14568534968695	chr10	43579211	43580311	+	0	NA	Intergenic	(TC)n|Simple_repeat|Simple_repeat	41781	NM_001081054	76563	Mm.5904	NM_001081054	ENSMUSG00000019863	Qrsl1	2700038P16Rik|C80053|GatA	glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1	protein-coding
common_peak1-11622-19-27--0.404667595395917-0.464317215211849	chr16	20140833	20141691	+	0	NA	5' UTR (NM_001145931, exon 1 of 8)	5' UTR (NM_001145931, exon 1 of 8)	126	NM_001145930	208146	Mm.390895	NM_001033237	ENSMUSG00000041215	Yeats2	BC042768|mKIAA1197	YEATS domain containing 2	protein-coding
unique_peak2-36495-2-8--2.08737925770563-1.65811743852845	chr2	154391248	154391582	+	0	NA	intron (NM_007891, intron 1 of 6)	intron (NM_007891, intron 1 of 6)	3747	NM_001291105	13555	Mm.18036	NM_007891	ENSMUSG00000027490	E2f1	E2F-1|mKIAA4009	E2F transcription factor 1	protein-coding
common_peak1-15680-8-11--0.579740082773585-1.14218153353838	chr4	137954681	137955222	+	0	NA	Intergenic	B3A|SINE|B2	-2578	NM_001081672	625638	Mm.379091	NM_001081672	ENSMUSG00000078235	Fam43b	OTTMUSG00000009974	family with sequence similarity 43, member B	protein-coding
common_peak1-14745-31-21-0.765807052175826-1.27201509741564	chr3	87515082	87516304	+	0	NA	intron (NM_001003912, intron 15 of 39)	intron (NM_001003912, intron 15 of 39)	36852	NM_028971	74485	Mm.474494	NM_028971	ENSMUSG00000023084	Lrrc71	4933430H15Rik	leucine rich repeat containing 71	protein-coding
common_peak2-26144-44-81--0.535659170049549-1.21200877642542	chr2	13573542	13575577	+	0	NA	Intergenic	Intergenic	78621	NM_011701	22352	Mm.268000	NM_011701	ENSMUSG00000026728	Vim	-	vimentin	protein-coding
common_peak1-17066-58-58-0.413306885528655-1.00278553979691	chr6	100833327	100834574	+	0	NA	Intergenic	B1_Mur2|SINE|Alu	50318	NM_182939	232314	Mm.27223	NM_182939	ENSMUSG00000052144	Ppp4r2	BE691708|C230060M08Rik	protein phosphatase 4, regulatory subunit 2	protein-coding
common_peak1-11330-15-27--0.795190171501948-0.918917574080418	chr15	85811316	85812216	+	0	NA	intron (NM_009886, intron 1 of 34)	B2_Mm2|SINE|B2	52441	NM_009886	12614	Mm.22680	NM_009886	ENSMUSG00000016028	Celsr1	Crsh|Scy|crash	cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog, Drosophila)	protein-coding
common_peak2-30451-52-47-0.523297489544543-1.21256932621262	chr7	45459947	45461520	+	0	NA	Intergenic	Intergenic	1059171	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak1-8001-15-15-0.0121647505556561-0.30803596071496	chr1	165432523	165433365	+	0	NA	Intergenic	Intergenic	-99172	NM_178883	98376	Mm.32901	NM_178883	ENSMUSG00000040124	Gorab	AI467484|NTKL-BP1|Scyl1bp1	golgin, RAB6-interacting	protein-coding
unique_peak1-3155-22-10-1.18785248645011-1.74319850844462	chr18	37835398	37836332	+	0	NA	exon (NM_033586, exon 1 of 4)	exon (NM_033586, exon 1 of 4)	1876	NM_033586	93711	Mm.247203	NM_033586	ENSMUSG00000023036	Pcdhga3	-	protocadherin gamma subfamily A, 3	protein-coding
unique_peak2-33353-3-6--1.22133801201688-1.08602067057793	chr11	31156527	31157025	+	0	NA	Intergenic	L1_Mus3|LINE|L1	113285	NM_011491	20856	Mm.32506	NM_011491		Stc2	AW125853|Stc2l|mustc2	stanniocalcin 2	protein-coding
common_peak1-17818-33-36-0.121884196896579-0.346766333527252	chr7	102209337	102210342	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-1149308	NM_011858	23966	Mm.254610	NM_011858	ENSMUSG00000048078	Tenm4	Doc4|ELM2|Odz4|R75022|Ten-m4|l(7)-3Rn|l7Rn3|mKIAA1302	teneurin transmembrane protein 4	protein-coding
unique_peak1-1614-17-3-2.21829633820504-3.11807310444576	chr13	41351905	41352740	+	0	NA	intron (NM_001135577, intron 1 of 1)	PB1D9|SINE|Alu	7109	NM_001135577	108934	Mm.38578	NM_001135577	ENSMUSG00000091264	Smim13	2900036K02Rik	small integral membrane protein 13	protein-coding
common_peak1-14583-13-17--0.391452970804544-0.364171515310935	chr3	41194520	41195099	+	0	NA	Intergenic	Intergenic	102312	NR_040385	78706	Mm.366094	NR_040385		C430002E04Rik	-	RIKEN cDNA C430002E04 gene	ncRNA
unique_peak2-34843-5-9--1.02630843089322-1.21398586181642	chr15	75981413	75982026	+	0	NA	Intergenic	Intergenic	-24733	NM_001142968	271278	Mm.205253	NM_198172	ENSMUSG00000044361	BC024139	6230424I18Rik	cDNA sequence BC024139	protein-coding
unique_peak2-35404-2-6--1.72480917832092-1.26211192963361	chr17	32528551	32528947	+	0	NA	intron (NM_178785, intron 15 of 16)	intron (NM_178785, intron 15 of 16)	-2365	NR_033525	22404	Mm.274948	NM_011717	ENSMUSG00000024050	Wiz	-	widely-interspaced zinc finger motifs	protein-coding
common_peak1-12097-8-16--1.08224042330277-0.891319708951328	chr17	25240301	25240794	+	0	NA	exon (NM_027880, exon 16 of 21)	exon (NM_027880, exon 16 of 21)	12303	NM_027880	71718	Mm.288702	NM_027880	ENSMUSG00000024170	Telo2	1200003M09Rik|AI415602|Tel2|mKIAA0683	TEL2, telomere maintenance 2, homolog (S. cerevisiae)	protein-coding
common_peak2-31727-31-57--0.632742324314449-1.23216191351737	chr9	9238009	9239501	+	0	NA	exon (NM_027823, exon 1 of 23)	exon (NM_027823, exon 1 of 23)	258	NM_027823	71544	Mm.334955	NM_027823	ENSMUSG00000050730	Arhgap42	9030420J04Rik|BE136619	Rho GTPase activating protein 42	protein-coding
common_peak2-19523-169-221-0.353592112796387-2.01213291381859	chr1	30948760	30951020	+	0	NA	Intergenic	MER21B|LTR|ERV1	-29789	NM_001081080	213109	Mm.194486	NM_025871	ENSMUSG00000048874	Phf3	2310061N19Rik|mKIAA0244	PHD finger protein 3	protein-coding
common_peak1-9089-16-29--0.788626953340457-0.98872314135509	chr11	69913913	69914583	+	0	NA	intron (NM_007493, intron 7 of 8)	Lx3_Mus|LINE|L1	8102	NM_007493	11890	Mm.1357	NM_007493	ENSMUSG00000040963	Asgr2	ASGPR2|Asgr|Asgr-2	asialoglycoprotein receptor 2	protein-coding
unique_peak2-35501-4-6--0.830815435910851-0.989110657569874	chr17	46646294	46646722	+	0	NA	intron (NM_001081335, intron 30 of 40)	intron (NM_001081335, intron 30 of 40)	12770	NM_207161	381101	Mm.35801	NM_207161	ENSMUSG00000040658	Dnph1	C76683|Rcl	2'-deoxynucleoside 5'-phosphate N-hydrolase 1	protein-coding
common_peak1-10547-6130-6094-1.84924143593165-Inf	chr14	19415580	19419812	+	0	NA	intron (NM_144839, intron 5 of 5)	intron (NM_144839, intron 5 of 5)	-253338	NM_009455	22194	Mm.4429	NM_009455	ENSMUSG00000021774	Ube2e1	UbcM3|Ubce5|ubcM2	ubiquitin-conjugating enzyme E2E 1	protein-coding
common_peak1-9226-11-9-0.186765489364251-0.344532117358383	chr11	84179853	84180370	+	0	NA	intron (NM_133360, intron 45 of 53)	intron (NM_133360, intron 45 of 53)	146892	NM_019816	56321	Mm.257482	NM_019816	ENSMUSG00000018697	Aatf	4933415H02Rik|5830465M17Rik|Che-1|Trb	apoptosis antagonizing transcription factor	protein-coding
unique_peak1-4197-12-2-2.06381348436648-2.79529063155376	chr2	118028719	118029377	+	0	NA	Intergenic	Intergenic	53654	NM_027759	71313	Mm.85046	NM_027759	ENSMUSG00000027344	Fsip1	1700012M13Rik|4933432K11Rik	fibrous sheath-interacting protein 1	protein-coding
unique_peak1-5773-12-2-2.06381348436648-2.79529063155376	chr6	54094463	54095086	+	0	NA	intron (NM_001163640, intron 1 of 12)	RSINE1|SINE|B4	104848	NM_001163640	69993	Mm.321147	NM_023543	ENSMUSG00000004633	Chn2	1700026N20Rik|4930557O16Rik|ARHGAP3|Bch	chimerin 2	protein-coding
common_peak2-31016-32-18-1.03116450577607-2.02129774107186	chr8	11330946	11331983	+	0	NA	intron (NM_009932, intron 3 of 47)	intron (NM_009932, intron 3 of 47)	18635	NM_009932	12827	Mm.181021	NM_009932	ENSMUSG00000031503	Col4a2	Col4a-2	collagen, type IV, alpha 2	protein-coding
unique_peak2-38611-6-15--1.4346018896197-1.16633110333236	chr7	80156320	80156963	+	0	NA	Intergenic	L1Md_T|LINE|L1	90313	NR_046024	625243	Mm.261798	NR_046024		Gm6567	-	predicted gene 6567	ncRNA
unique_peak1-4925-11-2-1.92373108353046-2.32232533660526	chr4	57845834	57846476	+	0	NA	Intergenic	Intergenic	-11965	NM_009649	11641	Mm.467752	NM_009649	ENSMUSG00000038729	Akap2	AA959716|AI649048|Akap-2|Akap-kl|B230340M18Rik|Prka2	A kinase (PRKA) anchor protein 2	protein-coding
unique_peak2-33170-1-8--2.79698201165906-2.05605744720049	chr10	95264396	95264676	+	0	NA	Intergenic	Intergenic	-138761	NM_001001932	216238	Mm.210035	NM_001001932	ENSMUSG00000036499	Eea1	A430109M19Rik|B230358H09Rik|ZFYVE2	early endosome antigen 1	protein-coding
unique_peak1-3061-9-1-2.18961340640422-2.31132995230379	chr18	10051857	10052369	+	0	NA	Intergenic	Intergenic	-21966	NM_001038589	59025	Mm.329277	NM_021522	ENSMUSG00000047879	Usp14	2610005K12Rik|2610037B11Rik|AW107924|C78769|ax|nmf375	ubiquitin specific peptidase 14	protein-coding
unique_peak2-39826-9-12--0.510826311736872-0.394412252720706	chrX	48143460	48144098	+	0	NA	Intergenic	MIR|SINE|MIR	-50834	NM_133729	70415	Mm.391246	NM_133729		2610018G03Rik	Mst4	RIKEN cDNA 2610018G03 gene	protein-coding
common_peak1-9937-16-20--0.274053780510699-0.353907621462756	chr12	108179642	108180338	+	0	NA	Intergenic	Intergenic	-225456	NR_015512	71033	Mm.159404	NR_015512	ENSMUSG00000085820	4933406K04Rik	4930426M03Rik|4930485I22Rik|4933427G14Rik	RIKEN cDNA 4933406K04 gene	ncRNA
unique_peak1-6972-11-4-1.18676548936425-1.68134727924692	chr8	119412844	119413476	+	0	NA	3' UTR (NM_026844, exon 4 of 4)	3' UTR (NM_026844, exon 4 of 4)	32176	NM_026844	66531	Mm.4011	NM_026844	ENSMUSG00000014633	Cmc2	1110046L09Rik|2310061C15Rik|DC13	COX assembly mitochondrial protein 2	protein-coding
common_peak2-29092-3-7--1.41398308995928-1.23214870625617	chr5	121837763	121838117	+	0	NA	Intergenic	B1_Mur2|SINE|Alu	-2316	NM_172275	231712	Mm.20488	NM_172275	ENSMUSG00000042726	Trafd1	1110008K06Rik|Fln29	TRAF type zinc finger domain containing 1	protein-coding
common_peak2-27951-2-12--2.61789397440441-2.55640854263862	chr4	33248660	33249074	+	0	NA	intron (NM_008075, intron 9 of 9)	intron (NM_008075, intron 9 of 9)	27845	NM_001034867	242377	Mm.372465	NM_001034867		Pm20d2	Acy1l2|Gm424	peptidase M20 domain containing 2	protein-coding
unique_peak1-6632-11-4-1.18676548936425-1.68134727924692	chr8	10912349	10912907	+	0	NA	Intergenic	Intergenic	12706	NR_102285	71624	Mm.139075	NR_102285		4833411C07Rik	-	RIKEN cDNA 4833411C07 gene	ncRNA
common_peak1-10125-10-6-0.549060422951165-1.21398586181642	chr13	32338232	32338714	+	0	NA	intron (NM_146041, intron 1 of 10)	L1Md_F2|LINE|L1	91940	NM_146041	218138	Mm.247143	NM_146041	ENSMUSG00000038372	Gmds	BC031788|C87208	GDP-mannose 4, 6-dehydratase	protein-coding
unique_peak2-34286-5-5--0.289342836727009-0.909929411522249	chr13	73758044	73758447	+	0	NA	TTS (NM_146047)	TTS (NM_146047)	-6204	NM_009354	21752	Mm.10109	NM_009354	ENSMUSG00000021611	Tert	EST2|TCS1|TP2|TR|TRT	telomerase reverse transcriptase	protein-coding
unique_peak2-33135-5-11--1.28934283672701-1.477227296591	chr10	82127992	82128319	+	0	NA	intron (NM_029102, intron 3 of 9)	intron (NM_029102, intron 3 of 9)	25240	NM_029102	74782	Mm.191281	NM_029102	ENSMUSG00000020251	Glt8d2	1110021D20Rik	glycosyltransferase 8 domain containing 2	protein-coding
unique_peak1-7206-10-3-1.35641534500877-1.75805390616669	chr9	67178629	67179109	+	0	NA	intron (NM_001081242, intron 26 of 57)	intron (NM_001081242, intron 26 of 57)	-94336	NR_029576	387185		NR_029576		Mir190a	Mir190|Mirn190|mir-190|mmu-mir-190|mmu-mir-190a	microRNA 190a	ncRNA
common_peak2-26455-107-171--0.0722178220287022-0.332794142635274	chr2	72978426	72981237	+	0	NA	intron (NM_030091, intron 7 of 7)	intron (NM_030091, intron 7 of 7)	72673	NM_030091	67059	Mm.22661	NM_025942	ENSMUSG00000027108	Ola1	2510025G09Rik|2810405J23Rik|2810409H07Rik|Gtpbp9|PTD004	Obg-like ATPase 1	protein-coding
unique_peak1-7174-9-5-0.604650905683064-1.21398586181642	chr9	61292034	61292520	+	0	NA	Intergenic	(CAAT)n|Simple_repeat|Simple_repeat	72104	NM_001083927	21887	Mm.24255	NM_009389	ENSMUSG00000032280	Tle3	2610103N05Rik|ESG|Grg3a|Grg3b|mKIAA1547	transducin-like enhancer of split 3, homolog of Drosophila E(spl)	protein-coding
common_peak1-17028-18-8-1.14299414978604-1.45476480588849	chr6	91515961	91516723	+	0	NA	Intergenic	Intergenic	50313	NM_026309	67678	Mm.246693	NM_026309	ENSMUSG00000034192	Lsm3	1010001J12Rik|2610005D18Rik|6030401D18Rik|SMX4|USS2	LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)	protein-coding
common_peak2-29113-4-6--0.830815435910851-0.989110657569874	chr5	123137291	123137754	+	0	NA	intron (NM_001038845, intron 12 of 12)	ORR1B1-int|LTR|MaLR	-20044	NM_011026	18438	Mm.290884	NM_011026	ENSMUSG00000029470	P2rx4	AI504491|AW555605|D5Ertd444e|P2X4	purinergic receptor P2X, ligand-gated ion channel 4	protein-coding
common_peak2-29310-35-66--0.634718931995268-1.36285458319551	chr5	145280405	145281312	+	0	NA	Intergenic	Intergenic	-25898	NM_016789	53324	Mm.10099	NM_016789	ENSMUSG00000059991	Nptx2	Narp|np2	neuronal pentraxin 2	protein-coding
common_peak1-9047-19-14-0.495796731053168-0.607095980551316	chr11	66998239	66999026	+	0	NA	intron (NM_001039545, intron 19 of 39)	intron (NM_001039545, intron 19 of 39)	14103	NM_001039545	17882	Mm.422801	NM_144961	ENSMUSG00000033196	Myh2	MHC2A|MyHC-IIa|Myh2a|Myhs-f|Myhs-f1|Myhsf1	myosin, heavy polypeptide 2, skeletal muscle, adult	protein-coding
common_peak2-26912-86-121-0.0448984564694666-0.32300996263333	chr2	162930970	162932360	+	0	NA	Intergenic	(TTTA)n|Simple_repeat|Simple_repeat	-16328	NM_026630	68236	Mm.33648	NM_026630		Gtsf1l	2410116G06Rik	gametocyte specific factor 1-like	protein-coding
common_peak2-25930-22-10-1.18785248645011-1.74319850844462	chr19	46529122	46529933	+	0	NA	intron (NM_001025391, intron 8 of 11)	intron (NM_001025391, intron 8 of 11)	-46611	NM_053100	93679	Mm.392177	NM_053100	ENSMUSG00000025034	Trim8	AA408830|BB006755|GERP|Rnf27	tripartite motif-containing 8	protein-coding
unique_peak1-1692-7-2-1.21412832957703-1.45399745587252	chr13	75634407	75634811	+	0	NA	Intergenic	L1_Mus4|LINE|L1	-147885	NR_030451	751556		NR_030451	miRBase:MI0004644	Mir682	Mirn682|mir-682|mmu-mir-682	microRNA 682	ncRNA
common_peak2-20087-61-83--0.00956809302942041-0.301029995663994	chr1	155972588	155974117	+	0	NA	Intergenic	L1_Mur2|LINE|L1	-74965	NM_001204908	100503355	Mm.484410	NM_001204908	ENSMUSG00000066797	Zfp648	ENSMUSG00000066797|Gm10178|Gm203	zinc finger protein 648	protein-coding
common_peak1-14734-16-18--0.129663871175524-0.307235046933848	chr3	85971074	85971734	+	0	NA	Intergenic	Intergenic	-24814	NM_016959	20091	Mm.399829	NM_016959	ENSMUSG00000028081	Rps3a1	Rps3a	ribosomal protein S3A1	protein-coding
common_peak2-24054-29-26-0.357402578451643-0.590428395010953	chr16	25532470	25533423	+	0	NA	Intergenic	Intergenic	-150905	NM_001127259	22061	Mm.20894	NM_011641	ENSMUSG00000022510	Trp63	AI462811|Ket|P51/P63|P63|P73l|Tp63|Trp53rp1	transformation related protein 63	protein-coding
common_peak1-16447-11-13--0.298661337805991-0.337263207250336	chr5	135186472	135187108	+	0	NA	intron (NM_007925, intron 27 of 36)	B1F|SINE|Alu	-22330	NM_010717	16885	Mm.15409	NM_010717	ENSMUSG00000029674	Limk1	-	LIM-domain containing, protein kinase	protein-coding
common_peak1-18361-12-12--0.0516637330534535-0.309718203022949	chr8	70139917	70140580	+	0	NA	Intergenic	L1Md_A|LINE|L1	92495	NM_008674	17962	Mm.57193	NM_008674	ENSMUSG00000056426	Nat3	-	N-acetyltransferase 3	protein-coding
common_peak2-23206-35-21-0.971938639825207-1.97718016252453	chr15	99942109	99943236	+	0	NA	intron (NM_001159361, intron 1 of 37)	intron (NM_001159361, intron 1 of 37)	-42155	NM_172819	239667	Mm.243658	NM_172819	ENSMUSG00000023026	Dip2b	4932422C22|AI317237|AI854602|mKIAA1463	DIP2 disco-interacting protein 2 homolog B (Drosophila)	protein-coding
common_peak1-14920-26-62--1.04938083134145-2.76923187144076	chr3	98382065	98383055	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-14599	NM_008294	15495	Mm.14309	NM_008294	ENSMUSG00000095143	Hsd3b4	-	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 4	protein-coding
common_peak2-23489-42-40-0.3847773232491-0.755494033265326	chr15	75861931	75862890	+	0	NA	Intergenic	Intergenic	-17644	NM_134087	105732	Mm.267178	NM_134087	ENSMUSG00000046761	Fam83h	AA409316	family with sequence similarity 83, member H	protein-coding
common_peak2-29208-12-11-0.0638134843664826-0.337263207250336	chr5	137078763	137079427	+	0	NA	Intergenic	Intergenic	-35735	NM_001291238	13047	Mm.320317	NM_009986	ENSMUSG00000029705	Cux1	CDP|Cutl1|Cux|Cux-1	cut-like homeobox 1	protein-coding
unique_peak1-5766-21-5-1.98452676454508-3.24127775360835	chr6	52681402	52682352	+	0	NA	intron (NM_025816, intron 4 of 17)	intron (NM_025816, intron 4 of 17)	18154	NM_025816	52440	Mm.389757	NM_025816	ENSMUSG00000004535	Tax1bp1	1200003J11Rik|1700069J21Rik|AA930106|D6Ertd404e|D6Ertd772e|T6bp|TXBP151	Tax1 (human T cell leukemia virus type I) binding protein 1	protein-coding
common_peak1-13004-40-39-0.337047587863736-0.649502410911277	chr19	4625044	4626413	+	0	NA	promoter-TSS (NM_023131)	promoter-TSS (NM_023131)	-111	NM_023131	19671	Mm.391143	NM_023131	ENSMUSG00000024889	Rce1	D19Ertd283e|D19Ertd98e	RCE1 homolog, prenyl protein peptidase (S. cerevisiae)	protein-coding
common_peak1-11481-23-26--0.0331199976543877-0.301029995663988	chr15	102073667	102074758	+	0	NA	intron (NM_011244, intron 3 of 9)	intron (NM_011244, intron 3 of 9)	2719	NM_001042727	19411	Mm.1273	NM_011244	ENSMUSG00000001288	Rarg	Nr1b3|RAR-gamma|RARD|RARgamma2	retinoic acid receptor, gamma	protein-coding
common_peak1-13196-31-29-0.318348075204605-0.512115693271959	chr19	21104734	21105676	+	0	NA	Intergenic	Intergenic	-76513	NM_028953	13409	Mm.219585	NM_028953	ENSMUSG00000024749	Tmc1	4933416G09Rik|Beethoven|Bth|CWEA1|dn	transmembrane channel-like gene family 1	protein-coding
unique_peak1-3009-16-8-0.948338640825749-1.02063122982878	chr17	84529332	84530133	+	0	NA	Intergenic	ID_B1|SINE|B4	51732	NR_045458	74473	Mm.399575	NR_045458		4933433H22Rik	-	RIKEN cDNA 4933433H22 gene	ncRNA
common_peak2-20065-8-13--0.802132504110034-0.562038191119711	chr1	153048239	153048801	+	0	NA	Intergenic	Intergenic	63356	NR_038011	402734	Mm.337666	NR_038011		C730036E19Rik	-	RIKEN cDNA C730036E19 gene	ncRNA
common_peak1-11101-14-8-0.729291158915332-0.771068449301682	chr15	61534943	61535530	+	0	NA	intron (NR_040350, intron 4 of 4)	intron (NR_040350, intron 4 of 4)	70770	NR_040350	432956	Mm.404918	NR_040350		D030024E09Rik	-	RIKEN cDNA D030024E09 gene	ncRNA
unique_peak1-1257-11-5-0.923731083530457-1.477227296591	chr11	116319103	116319741	+	0	NA	Intergenic	Intergenic	-3761	NM_001033267	217341	Mm.387352	NM_001033267	ENSMUSG00000070331	Qrich2	Gm66	glutamine rich 2	protein-coding
unique_peak1-2436-8-4-0.683294323060208-1.21878474469819	chr15	101425800	101426315	+	0	NA	intron (NM_016879, intron 1 of 3)	RCHARR1|DNA|MER1_type	-7054	NR_002868	432985	Mm.491078	NR_002868		Gm5476	EG432985|Kb17P	type II keratin Kb17P pseudogene	pseudo
unique_peak1-1824-18-9-0.990991056340989-1.23014042908325	chr14	33336872	33337580	+	0	NA	intron (NM_001081221, intron 4 of 20)	intron (NM_001081221, intron 4 of 20)	10519	NM_001081221	319955	Mm.318310	NM_177043	ENSMUSG00000054051	Ercc6	4732403I04|C130058G22Rik|CSB	excision repair cross-complementing rodent repair deficiency, complementation group 6	protein-coding
unique_peak2-32753-4-7--1.02346051385325-1.09384600808989	chr1	168710273	168710698	+	0	NA	Intergenic	Intergenic	-98509	NM_172844	240894	Mm.246610	NM_172844	ENSMUSG00000026560	Fmo9	4831428F09Rik	flavin containing monooxygenase 9	protein-coding
common_peak1-14932-27-56--0.841344063269506-1.7405232834637	chr3	101603747	101604783	+	0	NA	Intergenic	Intergenic	35881	NM_172295	242125	Mm.32900	NM_172295	ENSMUSG00000044313	Mab21l3	-	mab-21-like 3 (C. elegans)	protein-coding
unique_peak1-99-8-2-1.42025991722641-1.65811743852845	chr1	52578358	52578862	+	0	NA	Intergenic	Intergenic	-21318	NM_008667	17936	Mm.25903	NM_008667	ENSMUSG00000002881	Nab1	-	Ngfi-A binding protein 1	protein-coding
common_peak1-11236-24-15-0.793209902767717-1.16796998271032	chr15	79670568	79671560	+	0	NA	Intergenic	RSINE1|SINE|B4	-6301	NM_001013362	504193	Mm.38438	NM_029079	ENSMUSG00000022421	Npcd	Cbx6-Nptxr	neuronal pentraxin chromo domain	protein-coding
common_peak2-20191-23-18-0.473839991065495-0.618644178587689	chr1	173766502	173767130	+	0	NA	Intergenic	Lx3_Mus|LINE|L1	-3012	NM_001252472	12523	Mm.259115	NM_013489	ENSMUSG00000038147	Cd84	A130013D22Rik|CDw84|SLAMF5	CD84 antigen	protein-coding
common_peak1-17608-19-21--0.0567442919756109-0.301029995663971	chr7	45128121	45128826	+	0	NA	Intergenic	Intergenic	1391431	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak1-9281-36-32-0.434926966809301-0.779916249636873	chr11	88099112	88100152	+	0	NA	Intergenic	Intergenic	-7913	NM_028859	74297	Mm.207320	NM_028859	ENSMUSG00000034031	1700106J16Rik	Ccdc182	RIKEN cDNA 1700106J16 gene	protein-coding
common_peak1-10932-19-12-0.702247608520594-0.840839978588874	chr15	10713501	10714372	+	0	NA	intron (NR_045063, intron 5 of 6)	L1Md_T|LINE|L1	-44870	NR_040357	100502601	Mm.399434	NR_040357		Gm19276	-	predicted gene, 19276	ncRNA
unique_peak2-35046-3-7--1.41398308995928-1.23214870625617	chr16	4594695	4595085	+	0	NA	5' UTR (NM_031184, exon 1 of 7)	5' UTR (NM_031184, exon 1 of 7)	177	NM_031184	83396	Mm.134072	NM_031184	ENSMUSG00000014303	Glis2	Gli5|Klf16|Nkl	GLIS family zinc finger 2	protein-coding
common_peak1-15976-9-6-0.382258484346616-1.11707584880836	chr5	31967584	31967962	+	0	NA	intron (NM_153196, intron 4 of 7)	intron (NM_153196, intron 4 of 7)	1940	NR_105859	102466677		NR_105859		Mir3473e	mmu-mir-3473e	microRNA mir-3473e	ncRNA
unique_peak2-38556-4-5--0.608423014574403-0.909929411522249	chr7	63926708	63927137	+	0	NA	Intergenic	L1MD|LINE|L1	431781	NM_021879	18431	Mm.137052	NM_021879	ENSMUSG00000030450	Oca2	D7H15S12|D7Icr28RN|D7Nic1|p	oculocutaneous albinism II	protein-coding
common_peak1-9854-36-57--0.378659908959817-0.608301926896957	chr12	80132041	80133115	+	0	NA	intron (NM_181073, intron 1 of 28)	(CATATA)n|Simple_repeat|Simple_repeat	2428	NM_181073	211945	Mm.478321	NM_181073	ENSMUSG00000060716	Plekhh1	AV308913|C77772|D630024D12Rik|mKIAA1200	pleckstrin homology domain containing, family H (with MyTH4 domain) member 1	protein-coding
unique_peak2-37045-4-7--1.02346051385325-1.09384600808989	chr3	134236229	134236660	+	0	NA	Intergenic	Lx7|LINE|L1	-149845	NR_040600	75208	Mm.84580	NR_040600		4930539C22Rik	-	RIKEN cDNA 4930539C22 gene	ncRNA
common_peak1-9515-31-38--0.0601635480491254-0.30392537800267	chr11	115413001	115413961	+	0	NA	Intergenic	Intergenic	-12277	NM_001002929	445007	Mm.4379	NM_001002929	ENSMUSG00000020739	Nup85	Pcnt1|frount	nucleoporin 85	protein-coding
common_peak2-31217-17-23--0.366666162516118-0.383878263347744	chr8	69088590	69089401	+	0	NA	Intergenic	Intergenic	53356	NM_028927	74419	Mm.159193	NM_028927	ENSMUSG00000025519	Tktl2	4933401I19Rik	transketolase-like 2	protein-coding
common_peak2-27487-74-167--0.676430845800153-3.39697400295475	chr3	94657981	94660049	+	0	NA	intron (NM_172683, intron 2 of 18)	intron (NM_172683, intron 2 of 18)	17526	NM_172683	229584	Mm.274787	NM_172683	ENSMUSG00000038902	Pogz	9530006B08Rik	pogo transposable element with ZNF domain	protein-coding
common_peak2-32120-10-8-0.186490343566457-1.078512453669	chr9	102992985	102993463	+	0	NA	Intergenic	Intergenic	-21180	NM_173781	270192	Mm.490252	NM_173781	ENSMUSG00000032549	Rab6b	9630015C03|AI844641|C330006L04Rik|D9Bwg0185e	RAB6B, member RAS oncogene family	protein-coding
unique_peak2-38527-5-13--1.51173525806346-1.78669045979184	chr7	45714698	45715304	+	0	NA	Intergenic	Intergenic	804903	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak2-34521-5-9--1.02630843089322-1.21398586181642	chr14	54185781	54186183	+	0	NA	Intergenic	MMERGLN-int|LTR|ERV1	-99633	NM_001205242	100568452	Mm.213248	NM_001205242		A430107P09Rik	Va10	RIKEN cDNA A430107P09 gene	protein-coding
unique_peak2-34513-2-6--1.72480917832092-1.26211192963361	chr14	51913065	51913457	+	0	NA	Intergenic	L1_Mur2|LINE|L1	-37474	NM_053113	93726	Mm.153688	NM_053113	ENSMUSG00000047222	Rnase2a	Ear11	ribonuclease, RNase A family, 2A (liver, eosinophil-derived neurotoxin)	protein-coding
unique_peak1-684-14-7-0.899216160357645-0.947446088118041	chr10	77215605	77216388	+	0	NA	intron (NM_001287074, intron 1 of 11)	intron (NM_001287074, intron 1 of 11)	18074	NM_001101630	100041261	Mm.477434	NM_001101630	ENSMUSG00000095817	Gm3238	-	predicted gene 3238	protein-coding
unique_peak1-5123-8-3-1.00522241794757-1.39487600375387	chr5	73563927	73564406	+	0	NA	intron (NM_028194, intron 3 of 62)	intron (NM_028194, intron 3 of 62)	83691	NM_028194	72313	Mm.260594	NM_028194	ENSMUSG00000070733	Fryl	2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|mKIAA0826	furry homolog-like (Drosophila)	protein-coding
unique_peak1-944-13-4-1.45654393575041-2.23384849113406	chr11	54961345	54962002	+	0	NA	intron (NM_172258, intron 3 of 10)	intron (NM_172258, intron 3 of 10)	3535	NM_172258	215332	Mm.87054	NM_172258	ENSMUSG00000049491	Slc36a3	PAT3|TRAMD2|tramdorin2	solute carrier family 36 (proton/amino acid symporter), member 3	protein-coding
common_peak2-19638-34-50--0.290356814970229-0.452279894471924	chr1	40266438	40267359	+	0	NA	Intergenic	B4|SINE|B4	-15027	NM_008362	16177	Mm.896	NM_008362	ENSMUSG00000026072	Il1r1	CD121a|CD121b|IL-iR|Il1r-1	interleukin 1 receptor, type I	protein-coding
common_peak1-18438-37-47--0.0589694292353373-0.303364957229384	chr8	79639168	79640415	+	0	NA	intron (NM_001083906, intron 3 of 8)	intron (NM_001083906, intron 3 of 8)	213384	NM_001083906	110784	Mm.324393	NM_001083906	ENSMUSG00000031618	Nr3c2	MR|Mlr	nuclear receptor subfamily 3, group C, member 2	protein-coding
common_peak1-17563-25-20-0.469532482566345-0.662033714151238	chr7	34233355	34234351	+	0	NA	Intergenic	ETnERV2-int|LTR|ERVK	75600	NM_001270543	545948	Mm.349644	NM_001270543		Scgb1b20	EG545948|Gm5895	secretoglobin, family 1B, member 20	protein-coding
unique_peak2-39245-5-16--1.79184317725619-1.61682445937017	chr8	114777596	114778352	+	0	NA	Intergenic	L1_Mus4|LINE|L1	242715	NM_020584	57321	Mm.213064	NM_020584	ENSMUSG00000033430	Terf2ip	Rap1	telomeric repeat binding factor 2, interacting protein	protein-coding
unique_peak1-798-14-8-0.729291158915332-0.771068449301682	chr11	119979604	119980250	+	0	NA	TTS (NM_001164802)	TTS (NM_001164802)	19679	NM_001110242	208501	Mm.46699	NM_001110242		1810043H04Rik	-	RIKEN cDNA 1810043H04 gene	protein-coding
unique_peak1-5638-12-2-2.06381348436648-2.79529063155376	chr6	22378764	22379412	+	0	NA	Intergenic	MLT1B|LTR|MaLR	-73007	NM_138587	27999	Mm.490307	NM_138587	ENSMUSG00000029672	Fam3c	D6Wsu176e|Ilei	family with sequence similarity 3, member C	protein-coding
common_peak1-7492-109-125-0.408879758387284-1.61739841426186	chr1	10037014	10038778	+	0	NA	intron (NM_026493, intron 3 of 29)	intron (NM_026493, intron 3 of 29)	9597	NM_026493	211660	Mm.244046	NM_026493	ENSMUSG00000056763	Cspp1	2310020J12Rik|4930413O22Rik|AA387550|BC055915|Cspp2|Cspp3	centrosome and spindle pole associated protein 1	protein-coding
common_peak1-9919-47-63--0.0651585752334523-0.308035049112909	chr12	98736566	98738362	+	0	NA	Intergenic	L1_Mus1|LINE|L1	760083	NM_008079	14420	Mm.5120	NM_008079	ENSMUSG00000021003	Galc	2310068B06Rik|A930008M05Rik|AW212969|AW413532|Gacy|twi|twitcher	galactosylceramidase	protein-coding
common_peak1-15308-14-27--0.908138761699959-1.05601013496724	chr4	44167229	44167955	+	0	NA	intron (NM_175201, intron 1 of 10)	intron (NM_175201, intron 1 of 10)	12818	NM_175201	73469	Mm.262859	NM_175201	ENSMUSG00000035696	Rnf38	1700065B19Rik|2610202O07Rik|AA673263|Oip1	ring finger protein 38	protein-coding
common_peak2-21429-22-11-1.06232160436625-1.51503956548638	chr11	86256933	86257497	+	0	NA	Intergenic	Intergenic	-40944	NM_029788	76892	Mm.262707	NM_029788	ENSMUSG00000020521	Rnft1	0610013E23Rik|AV007605	ring finger protein, transmembrane 1	protein-coding
common_peak1-14811-27-22-0.467983994838223-0.705485015404196	chr3	90432663	90433700	+	0	NA	Intergenic	Intergenic	16365	NM_011313	20200	Mm.100144	NM_011313	ENSMUSG00000001025	S100a6	2A9|5B10|CALCYCLIN|Cacy|PRA	S100 calcium binding protein A6 (calcyclin)	protein-coding
common_peak2-21560-62-56-0.577861444637343-1.60550269793887	chr11	97279510	97280643	+	0	NA	Intergenic	Intergenic	-31398	NM_021493	58996	Mm.394118	NM_021493	ENSMUSG00000049807	Arhgap23	A330041B18Rik	Rho GTPase activating protein 23	protein-coding
common_peak1-16375-28-35--0.11696588162085-0.313805205020546	chr5	122899308	122900353	+	0	NA	Intergenic	Intergenic	27377	NM_019805	56317	Mm.37341	NM_019805	ENSMUSG00000029466	Anapc7	APC7|AW545589	anaphase promoting complex subunit 7	protein-coding
common_peak2-30526-4-7--1.02346051385325-1.09384600808989	chr7	66477517	66477943	+	0	NA	Intergenic	L1_Rod|LINE|L1	-6390	NM_173010	22215	Mm.9002	NM_011668	ENSMUSG00000025326	Ube3a	4732496B02|5830462N02Rik|A130086L21Rik|Hpve6a|mKIAA4216	ubiquitin protein ligase E3A	protein-coding
common_peak2-29697-25-17-0.691924903902794-0.98872314135509	chr6	82761049	82762079	+	0	NA	Intergenic	Intergenic	-37116	NM_013820	15277	Mm.255848	NM_013820	ENSMUSG00000000628	Hk2	AI642394|HKII	hexokinase 2	protein-coding
common_peak2-30583-13-25--0.921967687503323-0.983972868822056	chr7	80374794	80375478	+	0	NA	Intergenic	Intergenic	-80130	NR_105062	100505025	Mm.445959	NR_105062		LOC100505025	-	uncharacterized LOC100505025	ncRNA
common_peak2-26787-10-9-0.0344872501214071-1.05503135781948	chr2	148013691	148014061	+	0	NA	Intergenic	Intergenic	-141171	NM_010446	15376	Mm.938	NM_010446	ENSMUSG00000037025	Foxa2	HNF3-beta|HNF3beta|Hnf-3b|Hnf3b|Tcf-3b|Tcf3b	forkhead box A2	protein-coding
common_peak1-13689-82-67-0.805800303055396-3.50030175129853	chr2	30048495	30049764	+	0	NA	intron (NM_172404, intron 3 of 13)	B4|SINE|B4	12090	NM_172404	70266	Mm.216089	NM_172404	ENSMUSG00000039648	Ccbl1	2010009K05Rik|AI182306|Gtk|Kat1|KatI	cysteine conjugate-beta lyase 1	protein-coding
common_peak1-10598-28-15-1.05295911982146-1.80321929531239	chr14	31420796	31421976	+	0	NA	intron (NM_011103, intron 3 of 17)	intron (NM_011103, intron 3 of 17)	18008	NM_011103	18753	Mm.2314	NM_011103	ENSMUSG00000021948	Prkcd	AI385711|D14Ertd420e|PKC[d]|PKCdelta|Pkcd	protein kinase C, delta	protein-coding
unique_peak2-32732-4-6--0.830815435910851-0.989110657569874	chr1	162954233	162954499	+	0	NA	intron (NM_173424, intron 3 of 3)	intron (NM_173424, intron 3 of 3)	10024	NM_173424	240869	Mm.296127	NM_173424	ENSMUSG00000043467	Zbtb37	D430004I08Rik	zinc finger and BTB domain containing 37	protein-coding
common_peak1-14114-34-13-1.57471360494366-3.79546561170023	chr2	128240349	128241463	+	0	NA	intron (NR_028591, intron 1 of 1)	intron (NR_028591, intron 1 of 1)	14181	NR_028591	100043424	Mm.297222	NR_028589		Gm14005	OTTMUSG00000015351	predicted gene 14005	ncRNA
common_peak2-23606-24-49--0.850646287007008-1.56058662248874	chr15	81466262	81467076	+	0	NA	intron (NM_177821, intron 21 of 30)	intron (NM_177821, intron 21 of 30)	-27650	NM_001289712	214669	Mm.280768	NM_145993	ENSMUSG00000022394	L3mbtl2	4732493N06Rik|M4mbt	l(3)mbt-like 2 (Drosophila)	protein-coding
unique_peak1-3063-12-0-3.64877598508764-4.21441993929574	chr18	10917952	10918535	+	0	NA	Intergenic	Intergenic	-132693	NR_029781	723959		NR_029781		Mir1a-2	Mir1-2|Mirn1-2|mmu-mir-1-2|mmu-mir-1a-2	microRNA 1a-2	ncRNA
common_peak2-30568-19-24--0.241168863113038-0.344491671143527	chr7	79465544	79466357	+	0	NA	Intergenic	Intergenic	-14469	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding
unique_peak2-33355-0-12--4.5405706486153-3.1004765869889	chr11	31368697	31369403	+	0	NA	Intergenic	Intergenic	-98989	NM_011491	20856	Mm.32506	NM_011491		Stc2	AW125853|Stc2l|mustc2	stanniocalcin 2	protein-coding
common_peak2-26928-8-9--0.316705676939792-1.03275496310833	chr2	163575122	163575492	+	0	NA	intron (NM_001272052, intron 1 of 11)	intron (NM_001272052, intron 1 of 11)	668	NM_007398	11486	Mm.388	NM_007398	ENSMUSG00000017697	Ada	-	adenosine deaminase	protein-coding
common_peak2-24636-14-21--0.560215458279653-0.519193887192484	chr17	34964439	34965266	+	0	NA	intron (NM_019442, intron 4 of 6)	MuRRS4-int|LTR|ERV1	-4453	NM_011413	625018	Mm.439678	NM_011413		C4a	Slp	complement component 4A (Rodgers blood group)	protein-coding
common_peak1-8673-34-49--0.261787662773458-0.418071017975767	chr10	128909818	128910839	+	0	NA	exon (NM_146551, exon 1 of 1)	exon (NM_146551, exon 1 of 1)	578	NM_146551	258544	Mm.377560	NM_146551	ENSMUSG00000049217	Olfr788	MOR111-4	olfactory receptor 788	protein-coding
common_peak2-31679-9-6-0.382258484346616-1.11707584880836	chr8	126850069	126850458	+	0	NA	intron (NM_139272, intron 6 of 15)	B3A|SINE|B2	94969	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
unique_peak1-1453-10-3-1.35641534500877-1.75805390616669	chr12	105002659	105003175	+	0	NA	exon (NM_009246, exon 4 of 5)	exon (NM_009246, exon 4 of 5)	8926	NM_009246	20703	Mm.439695	NM_009246	ENSMUSG00000071177	Serpina1d	AI118301|Dom4|PI4|Spi1-4	serine (or cysteine) peptidase inhibitor, clade A, member 1D	protein-coding
unique_peak2-39054-0-6--3.64748585253182-1.56314192529759	chr8	70678072	70678442	+	0	NA	Intergenic	Lx9|LINE|L1	-122170	NM_028182	72281	Mm.40974	NM_028182	ENSMUSG00000053886	Sh2d4a	2210402M20Rik|SH2A	SH2 domain containing 4A	protein-coding
unique_peak1-7316-14-3-1.89921616035764-2.80787975886178	chr9	120593139	120593744	+	0	NA	Intergenic	Intergenic	106993	NR_073359	76100	Mm.48212	NR_073359	ENSMUSG00000052658	5830454E08Rik	-	RIKEN cDNA 5830454E08 gene	ncRNA
common_peak2-22807-39-29-0.708870651310635-1.42714050806394	chr14	14120179	14120953	+	0	NA	intron (NM_028052, intron 2 of 5)	L1ME4a|LINE|L1	3272	NM_028052	72003	Mm.317515	NM_028052	ENSMUSG00000056296	Synpr	1500003F20Rik|SPO	synaptoporin	protein-coding
unique_peak2-37924-4-9--1.34538860874061-1.36011389749466	chr5	144988294	144988749	+	0	NA	Intergenic	B4A|SINE|B4	-4074	NM_027410	70381	Mm.239412	NM_027410	ENSMUSG00000066621	Tecpr1	2210010N04Rik|mKIAA1358	tectonin beta-propeller repeat containing 1	protein-coding
common_peak2-27981-10-8-0.186490343566457-1.078512453669	chr4	43492968	43493391	+	0	NA	Intergenic	B3|SINE|B2	3402	NM_019436	54390	Mm.31775	NM_019436	ENSMUSG00000028460	Sit1	Sit	suppression inducing transmembrane adaptor 1	protein-coding
unique_peak2-39463-5-19--2.02630843089322-2.19184853030482	chr9	54586503	54587266	+	0	NA	Intergenic	Intergenic	-4528	NM_001025375	66317	Mm.28437	NM_023191	ENSMUSG00000061559	Wdr61	2700038L12Rik|2810418I05Rik|REC14	WD repeat domain 61	protein-coding
common_peak1-13436-48-48-0.356217307119606-0.742542878650758	chr19	55315337	55316766	+	0	NA	promoter-TSS (NM_001081076)	promoter-TSS (NM_001081076)	-325	NM_001081076	73707	Mm.489987	NM_001081076	ENSMUSG00000055523	Gucy2g	2410077I05Rik|GC-G	guanylate cyclase 2g	protein-coding
common_peak2-24452-10-11--0.228547155712387-0.31137425193576	chr17	23598574	23598982	+	0	NA	intron (NM_001104581, intron 5 of 5)	L1_Mus1|LINE|L1	17786	NM_001104581	619788	Mm.469847	NM_001104581	ENSMUSG00000091407	Vmn2r117	EG619788|V2Rp6	vomeronasal 2, receptor 117	protein-coding
common_peak1-9200-24-26-0.0383224006042484-0.317118655902073	chr11	80382251	80383166	+	0	NA	intron (NM_177390, intron 20 of 21)	ORR1B1|LTR|MaLR	92160	NM_009871	12569	Mm.142275	NM_009871	ENSMUSG00000048895	Cdk5r1	Cdk5r|D11Bwg0379e|p25|p35	cyclin-dependent kinase 5, regulatory subunit 1 (p35)	protein-coding
unique_peak1-4007-12-6-0.841421063030034-1.58711810488664	chr2	35695219	35695848	+	0	NA	intron (NM_029774, intron 6 of 9)	intron (NM_029774, intron 6 of 9)	20823	NR_040618	77665	Mm.400558	NR_040618	ENSMUSG00000086449	9030204H09Rik	-	RIKEN cDNA 9030204H09 gene	ncRNA
unique_peak1-2816-30-0-5.16967540949187-NA	chr17	26269332	26270666	+	0	NA	Intergenic	Intergenic	-5632	NM_009733	12005	Mm.23684	NM_009733	ENSMUSG00000024182	Axin1	AI316800|Axin|Fu|Kb|Ki|fused|kinky|knobbly	axin 1	protein-coding
unique_peak2-32617-7-11--0.785871670422967-1.21681515183528	chr1	106630383	106630941	+	0	NA	Intergenic	Intergenic	-34734	NM_011800	23836	Mm.103640	NM_011800	ENSMUSG00000050840	Cdh20	Cdh7	cadherin 20	protein-coding
unique_peak2-38238-5-5--0.289342836727009-0.909929411522249	chr6	119344183	119344572	+	0	NA	intron (NM_197985, intron 1 of 7)	RSINE1|SINE|B4	23124	NM_197985	68465	Mm.291826	NM_197985	ENSMUSG00000030168	Adipor2	1110001I14Rik|ADCR2|AI115388|AW554121|D6Ucla1e|Paqr2	adiponectin receptor 2	protein-coding
unique_peak1-7149-8-5-0.420259917226415-1.10484139239135	chr9	57637567	57638068	+	0	NA	TTS (NM_019689)	TTS (NM_019689)	-24150	NM_007713	102414	Mm.25720	NM_007713	ENSMUSG00000032316	Clk3	AI256811	CDC-like kinase 3	protein-coding
common_peak1-14063-9-10--0.269818212233077-1.05503135781948	chr2	120026714	120027324	+	0	NA	intron (NM_177845, intron 1 of 19)	intron (NM_177845, intron 1 of 19)	44052	NM_177845	329502	Mm.330505	NM_177845	ENSMUSG00000050211	Pla2g4e	2310026J01Rik|C230096D22|Pla2epsilon	phospholipase A2, group IVE	protein-coding
common_peak2-23745-25-24-0.217993715570381-0.403610417161433	chr15	97784348	97785096	+	0	NA	Intergenic	Intergenic	-9938	NM_201359	380967	Mm.196630	NM_201359	ENSMUSG00000052369	Tmem106c	AI046681|BC046621|D15Ertd405e	transmembrane protein 106C	protein-coding
common_peak2-21051-10-15--0.643584654991231-0.519648556297791	chr11	43747604	43748127	+	0	NA	Intergenic	(TTTC)n|Simple_repeat|Simple_repeat	-33126	NM_001284381	11548	Mm.39086	NM_007416	ENSMUSG00000050541	Adra1b	[a]1b	adrenergic receptor, alpha 1b	protein-coding
unique_peak2-39915-0-8--4.01005593191652-2.05605744720049	chrX	101222036	101222492	+	0	NA	Intergenic	Intergenic	-45641	NM_011276	19820	Mm.427762	NM_011276	ENSMUSG00000056537	Rlim	AL022832|AW743871|Ha1r|Rlim1|Rnf12	ring finger protein, LIM domain interacting	protein-coding
common_peak2-29769-10-8-0.186490343566457-1.078512453669	chr6	87672428	87672858	+	0	NA	Intergenic	Intergenic	-8220	NM_001159697	58229	Mm.333229	NM_021418	ENSMUSG00000068263	Efcc1	Ccdc48	EF hand and coiled-coil domain containing 1	protein-coding
unique_peak2-37854-5-13--1.51173525806346-1.78669045979184	chr5	135945678	135946400	+	0	NA	intron (NM_146001, intron 1 of 30)	intron (NM_146001, intron 1 of 30)	74953	NM_146001	215114	Mm.280805	NM_146001	ENSMUSG00000039959	Hip1	2610109B09Rik|A930014B11Rik|E130315I21Rik|mKIAA4113	huntingtin interacting protein 1	protein-coding
common_peak2-30733-18-41--1.07939827155041-1.90347783429882	chr7	116333567	116334199	+	0	NA	Intergenic	Intergenic	-20061	NM_057173	109594	Mm.360145	NM_057173	ENSMUSG00000036111	Lmo1	Rbtn-1|Rbtn1|Ttg1	LIM domain only 1	protein-coding
common_peak2-28125-24-18-0.545282389324131-0.776879508296351	chr4	94556209	94556919	+	0	NA	Intergenic	L1_Mur3|LINE|L1	38970	NM_027089	67753	Mm.25097	NM_027089	ENSMUSG00000028575	Eqtn	1700028B15Rik|4930579C15Rik|Afaf|C81058|Eqtl|Eqts	equatorin, sperm acrosome associated	protein-coding
common_peak2-27573-16-50--1.55416169970343-3.98915980442696	chr3	98355047	98355927	+	0	NA	TTS (NM_008294).2	TTS (NM_008294).2	12379	NM_001111336	15495	Mm.14309	NM_008294	ENSMUSG00000095143	Hsd3b4	-	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 4	protein-coding
common_peak2-21572-11-19--0.813234510635749-0.769930178837768	chr11	97659791	97660425	+	0	NA	promoter-TSS (NM_010688)	promoter-TSS (NM_010688)	-878	NM_010688	16796	Mm.271967	NM_010688	ENSMUSG00000038366	Lasp1	AA408629|Def-4|SH3P6|Tg(Col1a1-lacZ)1Ngma	LIM and SH3 protein 1	protein-coding
unique_peak1-1069-14-2-2.31425365963649-3.28500101358144	chr11	83855374	83855828	+	0	NA	3' UTR (NM_194341, exon 20 of 20)	3' UTR (NM_194341, exon 20 of 20)	26258	NM_019819	56405	Mm.240885	NM_019819	ENSMUSG00000018648	Dusp14	1110014C10Rik|2310042C07Rik|D11Ertd395e|MKP-L|Mkp6	dual specificity phosphatase 14	protein-coding
common_peak2-22572-15-19--0.309763344331706-0.356936432242222	chr13	64312091	64312730	+	0	NA	intron (NM_001122989, intron 9 of 13)	B3|SINE|B2	37436	NM_001122989	218294	Mm.25335	NM_172587	ENSMUSG00000033102	Cdc14b	2810432N10Rik|A530086E13Rik|AA472821|CDC14B3|Cdc14B1	CDC14 cell division cycle 14B	protein-coding
common_peak2-19838-13-9-0.456543935750406-0.53895475198017	chr1	90922592	90923086	+	0	NA	Intergenic	Intergenic	10151	NR_040471	73475	Mm.491040	NR_040471		1700067G17Rik	-	RIKEN cDNA 1700067G17 gene	ncRNA
common_peak2-22158-6-11--1.01956439034085-1.32595962126035	chr12	86947377	86947781	+	0	NA	intron (NM_001205053, intron 1 of 3)	B3|SINE|B2	6611	NM_001205053	81703	Mm.103560	NM_030887	ENSMUSG00000034271	Jdp2	Jundm2|Jundp2|TIF	Jun dimerization protein 2	protein-coding
common_peak1-15775-20-22--0.03548717146582-0.301029995663994	chr4	154011915	154012593	+	0	NA	Intergenic	Intergenic	-1272	NM_027504	70673	Mm.257785	NM_027504	ENSMUSG00000039410	Prdm16	5730557K01Rik|csp1|mel1	PR domain containing 16	protein-coding
unique_peak2-38729-3-5--0.998945590680433-0.96108193396963	chr7	112285687	112286110	+	0	NA	Intergenic	L1Md_F|LINE|L1	6925	NM_147045	259047	Mm.223428	NM_147045	ENSMUSG00000044120	Olfr683	MOR40-1	olfactory receptor 683	protein-coding
unique_peak2-36440-7-9--0.522837264589173-1.05908390183068	chr2	132253374	132253712	+	0	NA	intron (NR_045802, intron 1 of 3)	intron (NR_045802, intron 1 of 3)	3066	NR_045802	70845	Mm.158461	NR_045802	ENSMUSG00000027345	4921508D12Rik	-	RIKEN cDNA 4921508D12 gene	ncRNA
common_peak1-8497-24-33--0.294252938482622-0.390124689062463	chr10	81266526	81267194	+	0	NA	Intergenic	Intergenic	-8071	NM_001142963	100233208	Mm.327168	NM_001142963		Gm10778	ENSMUSG00000074860	predicted gene 10778	protein-coding
common_peak2-26020-21-12-0.869049547125143-1.18646456559501	chr19	58105292	58105825	+	0	NA	intron (NM_181415, intron 27 of 28)	intron (NM_181415, intron 27 of 28)	-20099	NR_049196	100885835		NR_049196		Mir5623	mmu-mir-5623	microRNA mir-5623	ncRNA
common_peak1-11425-27-45--0.532016005161777-0.779916249636879	chr15	99701742	99702847	+	0	NA	intron (NM_001113545, intron 1 of 10)	(TG)n|Simple_repeat|Simple_repeat	3593	NM_001113545	65970	Mm.33207	NM_023063	ENSMUSG00000023022	Lima1	Eplin	LIM domain and actin binding 1	protein-coding
common_peak2-20825-15-26--0.742722751607812-0.823046386575433	chr10	128411683	128412410	+	0	NA	Intergenic	Lx9|LINE|L1	-14002	NM_027853	71664	Mm.337232	NM_027853	ENSMUSG00000025347	Mettl7b	0610006F02Rik|AI266817	methyltransferase like 7B	protein-coding
common_peak1-7989-14-13-0.0918612383000403-0.332077462497413	chr1	161969126	161969801	+	0	NA	Intergenic	Intergenic	-5048	NR_028111	67647	Mm.171518	NM_001024470	ENSMUSG00000090394	4930523C07Rik	-	RIKEN cDNA 4930523C07 gene	protein-coding
unique_peak1-4232-19-7-1.40268732666169-1.89173646618542	chr2	124684497	124685623	+	0	NA	Intergenic	Intergenic	205743	NM_199239	214968	Mm.330536	NM_172537	ENSMUSG00000027200	Sema6d	1110067B02Rik|AA409156|D330011G23|mKIAA1479	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	protein-coding
common_peak1-18066-10-19--0.965512749878593-0.917676348953458	chr8	3587665	3588243	+	0	NA	exon (NM_001163749, exon 1 of 17)	exon (NM_001163749, exon 1 of 17)	504	NM_001163749	69697	Mm.390010	NM_027171	ENSMUSG00000044433	Camsap3	2310057J16Rik|Kiaa1543|Nezha	calmodulin regulated spectrin-associated protein family, member 3	protein-coding
common_peak2-29223-13-6-0.971117108580164-1.01572999746118	chr5	137746904	137747322	+	0	NA	intron (NM_001109910, intron 2 of 19)	B3A|SINE|B2	1789	NM_031405	83701	Mm.387734	NM_031405	ENSMUSG00000037364	Srrt	2810019G02Rik|ASR2A|ASR2B|ASR2C|ASR2D|Ars2|Asr2	serrate RNA effector molecule homolog (Arabidopsis)	protein-coding
common_peak2-24413-7-12--0.901348887842903-1.31827279259406	chr17	15527014	15527665	+	0	NA	Intergenic	Intergenic	-5827	NR_033586	67544	Mm.35039	NM_024203	ENSMUSG00000014763	Fam120b	4932442K08Rik|AW049283|AW413338|CCPG|Pgcc1|mKIAA1838	family with sequence similarity 120, member B	protein-coding
common_peak1-8852-33-25-0.630897844384437-1.05951140195658	chr11	31671101	31672144	+	0	NA	Intergenic	Intergenic	52925	NR_102310	414116	Mm.150222	NR_102310	ENSMUSG00000085772	D630024D03Rik	-	RIKEN cDNA D630024D03 gene	ncRNA
unique_peak2-39422-3-10--1.87341470859657-1.75805390616669	chr9	41809024	41809453	+	0	NA	intron (NM_011436, intron 30 of 47)	B4|SINE|B4	123134	NM_011436	20660	Mm.121920	NM_011436		Sorl1	2900010L19Rik|AI596264|AW261561|LR11|SorLA|gp250|mSorLA	sortilin-related receptor, LDLR class A repeats-containing	protein-coding
common_peak2-24143-87-83-0.603319683002408-2.40111879509213	chr16	37539264	37540561	+	0	NA	promoter-TSS (NM_001042499)	promoter-TSS (NM_001042499)	-57	NM_028812	74197	Mm.287795	NM_028812	ENSMUSG00000022828	Gtf2e1	2610024P03Rik|56kDa|AI303800|FE|TFIIE-A	general transcription factor II E, polypeptide 1 (alpha subunit)	protein-coding
common_peak2-23601-13-11-0.193509529916613-0.379391706698377	chr15	80948133	80948786	+	0	NA	intron (NM_001082536, intron 1 of 13)	intron (NM_001082536, intron 1 of 13)	-12982	NM_153049	223701	Mm.439814	NM_153049	ENSMUSG00000042292	Mkl1	AMKL|Bsac|Mal|Mrtf-A	MKL (megakaryoblastic leukemia)/myocardin-like 1	protein-coding
unique_peak2-37159-5-7--0.704380336005853-1.01466476204226	chr4	43039806	43040198	+	0	NA	TTS (NM_023231)	TTS (NM_023231)	-1374	NM_020035	56703	Mm.143738	NM_020035	ENSMUSG00000028454	Pigo	mFLJ00350	phosphatidylinositol glycan anchor biosynthesis, class O	protein-coding
common_peak1-13263-13-10-0.319040412000471-0.446472590016315	chr19	34208278	34209016	+	0	NA	intron (NM_024204, intron 2 of 5)	IAPEz-int|LTR|ERVK	31884	NM_024204	52024	Mm.183030	NM_024204	ENSMUSG00000024774	Ankrd22	5430429D21Rik|D19Ertd675e	ankyrin repeat domain 22	protein-coding
common_peak2-31896-15-16--0.075298090694683-0.301029995663976	chr9	57246787	57247632	+	0	NA	intron (NR_040729, intron 2 of 2)	intron (NR_040729, intron 2 of 2)	8332	NR_040729	73772	Mm.444684	NR_040729		4930430J02Rik	-	RIKEN cDNA 4930430J02 gene	ncRNA
common_peak1-17224-26-10-1.46846747352116-2.57346781069461	chr6	126035806	126036790	+	0	NA	Intergenic	Intergenic	78680	NM_001164035	18205	Mm.267570	NM_008742	ENSMUSG00000049107	Ntf3	AI316846|AI835689|Nt3|Ntf-3	neurotrophin 3	protein-coding
common_peak1-8428-27-33--0.0959168903551033-0.304370854244436	chr10	77210870	77211975	+	0	NA	intron (NM_001287074, intron 1 of 11)	MTEa|LTR|MaLR	22191	NM_001205033	100502953	Mm.486157	NM_001205033	ENSMUSG00000096421	Gm10100	ENSMUSG00000061452	predicted gene 10100	protein-coding
common_peak1-12620-38-17-1.40152765785622-3.645822589496	chr18	32152222	32153570	+	0	NA	intron (NM_032394, intron 16 of 46)	intron (NM_032394, intron 16 of 46)	-43606	NM_001025381	574402	Mm.391108	NM_001025381	ENSMUSG00000052229	Gpr17	AI853548	G protein-coupled receptor 17	protein-coding
common_peak2-24003-50-57-0.18295932135138-0.444157274383078	chr16	20672633	20673842	+	0	NA	intron (NM_001005331, intron 1 of 31)	CpG	415	NM_001005331	208643	Mm.260256	NM_145941	ENSMUSG00000045983	Eif4g1	E030015G23Rik|eIF4GI	eukaryotic translation initiation factor 4, gamma 1	protein-coding
common_peak2-21142-10-11--0.228547155712387-0.31137425193576	chr11	55204351	55204650	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	29082	NM_009242	20692	Mm.291442	NM_009242	ENSMUSG00000018593	Sparc	BM-40|ON	secreted acidic cysteine rich glycoprotein	protein-coding
common_peak2-19854-9-10--0.269818212233077-1.05503135781948	chr1	91456748	91457384	+	0	NA	intron (NM_001037136, intron 1 of 16)	intron (NM_001037136, intron 1 of 16)	105680	NM_001037136	347722	Mm.291135	NM_178119	ENSMUSG00000055013	Agap1	Centg2|Ggap1|R75364|mKIAA1099	ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	protein-coding
common_peak1-19119-8-9--0.316705676939792-1.03275496310833	chr9	76003924	76004538	+	0	NA	Intergenic	L1_Mus4|LINE|L1	57233	NM_205844	404194	Mm.213862	NM_205844	ENSMUSG00000059383	Gfral	AY457637|Gral	GDNF family receptor alpha like	protein-coding
common_peak1-10917-22-13-0.8399291830298-1.1381569562463	chr15	5536569	5537531	+	0	NA	intron (NR_045274, intron 3 of 4)	intron (NR_045274, intron 3 of 4)	90732	NR_045274	71432	Mm.291087	NR_045274		5430437J10Rik	-	RIKEN cDNA 5430437J10 gene	ncRNA
common_peak1-13090-76-75-0.514016872419696-1.67315279398724	chr19	7205328	7207490	+	0	NA	intron (NM_134147, intron 3 of 10)	MIRc|SINE|MIR	-26190	NM_201411	396184	Mm.386930	NM_201411	ENSMUSG00000047787	Flrt1	AW742165|D630040I23Rik	fibronectin leucine rich transmembrane protein 1	protein-coding
unique_peak2-34611-6-7--0.434601889619698-0.97990265578305	chr14	74910295	74910739	+	0	NA	Intergenic	Intergenic	-130130	NM_172812	15558	Mm.214351	NM_172812	ENSMUSG00000034997	Htr2a	E030013E04|Htr-2|Htr2	5-hydroxytryptamine (serotonin) receptor 2A	protein-coding
common_peak2-26800-7-8--0.370834171144123-1.00793137938329	chr2	148856425	148856713	+	0	NA	Intergenic	RMER16|LTR|ERVK	-155365	NM_009976	13010	Mm.4263	NM_009976	ENSMUSG00000027447	Cst3	CysC	cystatin C	protein-coding
unique_peak2-39401-1-6--2.43441193227435-1.56314192529759	chr9	31283808	31284219	+	0	NA	Intergenic	ETnERV2-int|LTR|ERVK	-12190	NM_144936	235135	Mm.390134	NM_144936	ENSMUSG00000041737	Tmem45b	BC018222	transmembrane protein 45b	protein-coding
common_peak2-27432-21-29--0.337401330342283-0.403610417161439	chr3	89458950	89459796	+	0	NA	intron (NM_080466, intron 5 of 7)	intron (NM_080466, intron 5 of 7)	-59571	NM_001038587	56417	Mm.316628	NM_019655	ENSMUSG00000027951	Adar	AV242451|Adar1|Adar1p110|Adar1p150|mZaADAR	adenosine deaminase, RNA-specific	protein-coding
common_peak2-24523-20-50--1.1843505573803-2.72904913530878	chr17	26676110	26677122	+	0	NA	Intergenic	L1MB1|LINE|L1	-21841	NM_026170	67458	Mm.30496	NM_026170	ENSMUSG00000001576	Ergic1	1200007D18Rik|maa-136	endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	protein-coding
common_peak1-12484-8-16--1.08224042330277-0.891319708951328	chr17	85089853	85090368	+	0	NA	intron (NM_026180, intron 3 of 12)	B1_Mur2|SINE|Alu	7649	NM_026180	67470	Mm.26581	NM_026180	ENSMUSG00000024254	Abcg8	1300003C16Rik|AI114946|sterolin-2	ATP-binding cassette, sub-family G (WHITE), member 8	protein-coding
unique_peak2-39090-3-6--1.22133801201688-1.08602067057793	chr8	76898882	76899221	+	0	NA	Intergenic	Intergenic	-498022	NM_027837	71597	Mm.158735	NM_027837	ENSMUSG00000031621	Isx	9130012O13Rik|Pix-1	intestine specific homeobox	protein-coding
common_peak1-14665-38-64--0.450915153729924-0.799068699966534	chr3	58691375	58692564	+	0	NA	Intergenic	MER5B|DNA|MER1_type	-2835	NM_153385	229320	Mm.131502	NM_153384	ENSMUSG00000043850	Clrn1	A130002D11Rik|USH3|Ush3a	clarin 1	protein-coding
common_peak1-19081-8-8--0.164702583494742-1.00793137938329	chr9	70679712	70680238	+	0	NA	intron (NM_008280, intron 1 of 8)	B3A|SINE|B2	102640	NM_008280	15450	Mm.390187	NM_008280	ENSMUSG00000032207	Lipc	AI256194|HL|Hpl	lipase, hepatic	protein-coding
common_peak1-18210-19-13-0.595332404604082-0.713635438203849	chr8	24570259	24571122	+	0	NA	Intergenic	Intergenic	48716	NM_013834	20377	Mm.281691	NM_013834	ENSMUSG00000031548	Sfrp1	2210415K03Rik|AW011917|AW107218|AW742929|sFRP-1	secreted frizzled-related protein 1	protein-coding
common_peak1-13907-17-40--1.13925566641305-1.9602491241746	chr2	80315398	80316265	+	0	NA	Intergenic	MTEa|LTR|MaLR	-28278	NM_011356	20378	Mm.427436	NM_011356	ENSMUSG00000027004	Frzb	Frp|Sfrp3|frezzled|fritz|frzb-1	frizzled-related protein	protein-coding
common_peak1-15228-15-17--0.157760250886656-0.307611222530528	chr4	155172759	155173379	+	0	NA	Intergenic	RLTR22_Mur|LTR|ERVK	-4658	NM_025570	66448	Mm.23825	NM_025570	ENSMUSG00000029066	Mrpl20	2610008D01Rik|4930425I20Rik	mitochondrial ribosomal protein L20	protein-coding
unique_peak2-35660-7-6--0.00826409175941478-0.97990265578305	chr18	5320075	5320487	+	0	NA	intron (NM_178722, intron 1 of 4)	L1M4b|LINE|L1	14156	NM_178722	240186	Mm.118257	NM_178722	ENSMUSG00000050945	Zfp438	9430031G09|9430091M14Rik|B830013J05Rik	zinc finger protein 438	protein-coding
common_peak2-22716-162-267-0.00833035002752958-0.304669353828675	chr13	103919566	103922008	+	0	NA	intron (NM_175171, intron 3 of 28)	intron (NM_175171, intron 3 of 28)	203785	NM_175171	328329	Mm.202606	NM_175171	ENSMUSG00000034751	Mast4	4930420O11Rik|AI642422|mKIAA0303	microtubule associated serine/threonine kinase family member 4	protein-coding
unique_peak1-2445-9-4-0.867685311516858-1.36011389749466	chr15	101947710	101948177	+	0	NA	3' UTR (NM_001033277, exon 11 of 11)	3' UTR (NM_001033277, exon 11 of 11)	14524	NM_153533	209039	Mm.29389	NM_153533	ENSMUSG00000037003	Tenc1	C1-ten|nep|nph	tensin like C1 domain-containing phosphatase	protein-coding
common_peak2-28620-97-192--0.408455965775799-1.72905817593741	chr5	24841367	24843720	+	0	NA	intron (NM_001081383, intron 27 of 58)	intron (NM_001081383, intron 27 of 58)	113832	NM_144908	231050	Mm.246718	NM_144908	ENSMUSG00000038072	Galnt11	A430075I06Rik|AI648252|E430002F06Rik	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11	protein-coding
common_peak1-7624-68-54-0.788601065773636-2.7827508890492	chr1	63775937	63777741	+	0	NA	promoter-TSS (NM_172422)	promoter-TSS (NM_172422)	53	NM_029696	76668	Mm.30494	NM_029696	ENSMUSG00000025963	Mdh1b	1700124B08Rik|AV255588	malate dehydrogenase 1B, NAD (soluble)	protein-coding
unique_peak2-34164-3-6--1.22133801201688-1.08602067057793	chr13	31439857	31440204	+	0	NA	Intergenic	MT2A|LTR|ERVL	-107075	NR_045957	73924	Mm.417825	NR_045957	ENSMUSG00000087460	4930401O12Rik	-	RIKEN cDNA 4930401O12 gene	ncRNA
unique_peak2-39813-1-6--2.43441193227435-1.56314192529759	chrX	36329193	36329550	+	0	NA	Intergenic	Intergenic	203414	NM_183126	77883	Mm.113311	NM_183126	ENSMUSG00000051361	6030498E09Rik	-	RIKEN cDNA 6030498E09 gene	protein-coding
common_peak2-27924-12-16--0.4386868561627-0.368541233333383	chr4	11990542	11991104	+	0	NA	exon (NM_177861, exon 12 of 28)	exon (NM_177861, exon 12 of 28)	24281	NM_177861	329795	Mm.475125	NM_177861	ENSMUSG00000049488	Tmem67	5330408M12Rik|B230117O07|b2b1163.1Clo|b2b1291.1Clo	transmembrane protein 67	protein-coding
unique_peak2-39442-2-6--1.72480917832092-1.26211192963361	chr9	46448174	46448617	+	0	NA	Intergenic	ID_B1|SINE|B4	-273291	NR_015605	73040	Mm.265384	NR_015605		2900052N01Rik	AU067665	RIKEN cDNA 2900052N01 gene	ncRNA
common_peak2-25402-20-19-0.16614668970383-0.348739088570342	chr19	12500915	12501799	+	0	NA	Intergenic	Intergenic	-1038	NM_019540	56093	Mm.285849	NM_019540	ENSMUSG00000040065	Pfpl	Epcs5|Epcs50	pore forming protein-like	protein-coding
common_peak1-12315-8-7-0.00522241794757061-1.00793137938329	chr17	47437456	47437959	+	0	NA	intron (NM_172622, intron 2 of 16)	B1_Mm|SINE|Alu	-68129	NM_001146212	64657	Mm.216250	NM_183086	ENSMUSG00000034729	Mrps10	1110038B19Rik|AW743084|Rpms10	mitochondrial ribosomal protein S10	protein-coding
common_peak2-26099-9-21--1.26981821223308-1.37307999835977	chr2	3512008	3512948	+	0	NA	Intergenic	Intergenic	82141	NM_177647	227526	Mm.211455	NM_177647	ENSMUSG00000039496	Cdnf	9330140G23|Armetl1	cerebral dopamine neurotrophic factor	protein-coding
common_peak1-18628-60-58-0.47164881225869-1.19886391578317	chr8	109957232	109959183	+	0	NA	Intergenic	RLTR14-int|LTR|ERV1	-2091	NM_025830	66894	Mm.390058	NM_025830	ENSMUSG00000031930	Wwp2	1300010O06Rik|AA690238|AIP2|AW554328	WW domain containing E3 ubiquitin protein ligase 2	protein-coding
common_peak2-32408-67-61-0.59021517239612-1.75549247027451	chrX	152232914	152233793	+	0	NA	Intergenic	Intergenic	-175483	NM_001093750	211612	Mm.218811	NM_001093750		Ptchd1	9630036J22Rik|AI848149|Gm387	patched domain containing 1	protein-coding
common_peak1-15370-20-18-0.240147271147608-0.388034239052786	chr4	59318374	59319417	+	0	NA	Intergenic	L1Md_T|LINE|L1	45972	NR_105031	101055769	Mm.421401	NR_105031		LOC101055769	-	uncharacterized LOC101055769	ncRNA
common_peak1-11623-20-21-0.0286431659538957-0.306080386793804	chr16	20301805	20302560	+	0	NA	intron (NM_001005767, intron 1 of 9)	CpG	253	NM_001005767	381038	Mm.371737	NM_001005767	ENSMUSG00000033918	Parl	D16Ertd607e|PRO2207|PSARL1|PSENIP2|Psarl	presenilin associated, rhomboid-like	protein-coding
unique_peak2-37298-0-6--3.64748585253182-1.56314192529759	chr4	120580931	120581297	+	0	NA	Intergenic	Intergenic	16496	NM_028457	73172	Mm.151436	NM_028457	ENSMUSG00000028629	Exo5	3110037I16Rik|AV297100|Dem1|Exo V|mExo5	exonuclease 5	protein-coding
unique_peak1-6322-14-3-1.89921616035764-2.80787975886178	chr7	45664079	45664681	+	0	NA	Intergenic	Intergenic	855524	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak1-14420-10-3-1.35641534500877-1.75805390616669	chr2	180216390	180216889	+	0	NA	Intergenic	CT-rich|Low_complexity|Low_complexity	-18042	NM_018766	18216	Mm.301712	NM_018766	ENSMUSG00000027568	Ntsr1	NT-1R|NTR-1|NTR1	neurotensin receptor 1	protein-coding
common_peak2-21171-11-10-0.0492619656143161-0.31137425193576	chr11	59601100	59601677	+	0	NA	promoter-TSS (NM_183139)	promoter-TSS (NM_183139)	-229	NM_001290283	194908	Mm.344651	NM_183139		Pld6	4933433K01Rik|Gm10|Zuc|mZuc|mitoPLD	phospholipase D family, member 6	protein-coding
common_peak1-13054-18-12-0.612479433087259-0.739965416525508	chr19	5942125	5943034	+	0	NA	intron (NM_001164057, intron 15 of 17)	intron (NM_001164057, intron 15 of 17)	-17763	NM_026772	104252	Mm.491103	NM_026772	ENSMUSG00000045664	Cdc42ep2	1110008C05Rik|Borg1|Cep2|D19Bwg1013e	CDC42 effector protein (Rho GTPase binding) 2	protein-coding
common_peak1-10859-37-26-0.771105569322351-1.52341724501298	chr14	121877624	121878820	+	0	NA	intron (NM_053079, intron 11 of 22)	MIRb|SINE|MIR	26254	NM_053079	56643	Mm.155618	NM_053079	ENSMUSG00000025557	Slc15a1	D630032F02|PECT1|PEPT1	solute carrier family 15 (oligopeptide transporter), member 1	protein-coding
common_peak2-29073-9-6-0.382258484346616-1.11707584880836	chr5	118425195	118425619	+	0	NA	Intergenic	Intergenic	-1372	NM_145564	231670	Mm.21912	NM_145564	ENSMUSG00000032898	Fbxo21	2810425J22Rik|AU016673|mKIAA0875	F-box protein 21	protein-coding
common_peak2-27531-10-16--0.73104749624157-0.604422558181019	chr3	95893870	95894548	+	0	NA	Intergenic	B3|SINE|B2	-14241	NM_001025613	229603	Mm.272336	NM_001025613	ENSMUSG00000038495	Otud7b	2900060B22Rik|4930463P07Rik|AI462125|CEZANNE|Trabid2|Za20d1	OTU domain containing 7B	protein-coding
common_peak1-13554-10-45--2.16714661104824-5.53229495488999	chr2	5063418	5063984	+	0	NA	intron (NM_028804, intron 2 of 2)	intron (NM_028804, intron 2 of 2)	4879	NM_028804	74186	Mm.274715	NM_028804	ENSMUSG00000026676	Ccdc3	2310045O21Rik	coiled-coil domain containing 3	protein-coding
common_peak1-15151-22-9-1.32535601020004-2.00244947055753	chr3	145758400	145759340	+	0	NA	intron (NM_172864, intron 4 of 22)	RLTR11A|LTR|ERVK	12130	NM_172864	242253	Mm.235040	NM_172864	ENSMUSG00000043020	Wdr63	4931433A13Rik	WD repeat domain 63	protein-coding
common_peak2-30373-26-52--0.800021362404737-1.59856525524509	chr7	28924383	28925527	+	0	NA	exon (NM_001164655, exon 5 of 20)	exon (NM_001164655, exon 5 of 20)	10470	NM_001164655	319482	Mm.483194	NM_176924	ENSMUSG00000078776	9530053A07Rik	FCGBP	RIKEN cDNA 9530053A07 gene	protein-coding
common_peak2-31396-5-8--0.874305337448166-1.10484139239135	chr8	88297604	88298058	+	0	NA	intron (NM_028007, intron 8 of 17)	Lx9|LINE|L1	67017	NM_028007	71927	Mm.61018	NM_028007	ENSMUSG00000031703	Itfg1	2310047C21Rik|AI314457|Cda08|D8Wsu49e	integrin alpha FG-GAP repeat containing 1	protein-coding
common_peak1-9768-23-37--0.526160008934505-0.720235944639228	chr12	55199368	55200141	+	0	NA	Intergenic	Intergenic	105107	NM_028133	112407	Mm.133037	NM_028133	ENSMUSG00000035105	Egln3	2610021G09Rik|AI505553|AI648162|Hif-p4h-3|Phd3|SM-20	egl-9 family hypoxia-inducible factor 3	protein-coding
unique_peak1-5179-7-3-0.799090830298189-1.23214870625617	chr5	30767754	30768265	+	0	NA	promoter-TSS (NM_029285)	promoter-TSS (NM_029285)	-441	NM_029285	75434	Mm.332291	NM_029285	ENSMUSG00000029182	1700001C02Rik	1700047H18Rik	RIKEN cDNA 1700001C02 gene	protein-coding
common_peak2-31635-11-8-0.338768582809301-1.14218153353838	chr8	123716197	123716605	+	0	NA	Intergenic	Intergenic	64816	NM_008024	14241	Mm.5111	NM_008024	ENSMUSG00000097084	Foxl1	FREAC7|Fkh6|fkh-6	forkhead box L1	protein-coding
common_peak1-14288-10-14--0.550475250599749-0.446472590016315	chr2	157457007	157457612	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-65212	NM_016916	53619	Mm.480461	NM_016916	ENSMUSG00000067787	Blcap	AI462828|Bc10	bladder cancer associated protein homolog (human)	protein-coding
unique_peak2-39750-3-9--1.73591118484664-1.57096726280955	chrUn_GL456367	13122	13378	+	0	NA	NA	NA	NA	NA								
common_peak2-24938-23-17-0.551842503066768-0.713114929964887	chr17	94864551	94865432	+	0	NA	Intergenic	L1_Mus1|LINE|L1	284241	NM_176917	76781	Mm.139146	NM_176917	ENSMUSG00000055660	Mettl4	2410198H06Rik|A730091E08Rik|AV296509|HsT661	methyltransferase like 4	protein-coding
unique_peak1-886-16-6-1.31090872021046-1.49151883326344	chr11	32435883	32436701	+	0	NA	intron (NM_009288, intron 1 of 18)	intron (NM_009288, intron 1 of 18)	3026	NM_009288	20868	Mm.8235	NM_009288	ENSMUSG00000020272	Stk10	Gek1|Lok|mKIAA4026	serine/threonine kinase 10	protein-coding
unique_peak1-3660-16-3-2.11826364226806-2.65002542325363	chr19	40178026	40178886	+	0	NA	intron (NM_134144, intron 7 of 8)	Lx2B|LINE|L1	14287	NM_001167875	107141	Mm.474575	NM_134144	ENSMUSG00000054827	Cyp2c50	AI266900	cytochrome P450, family 2, subfamily c, polypeptide 50	protein-coding
unique_peak1-1863-7-4-0.477162735410827-1.09384600808989	chr14	54606105	54606443	+	0	NA	Intergenic	Intergenic	267330	NM_001113358	13135	Mm.319038	NM_010015	ENSMUSG00000022174	Dad1	AI323713	defender against cell death 1	protein-coding
common_peak1-17732-8-18--1.24270509549601-1.15812782348128	chr7	80375532	80376098	+	0	NA	Intergenic	Intergenic	-79451	NR_105062	100505025	Mm.445959	NR_105062		LOC100505025	-	uncharacterized LOC100505025	ncRNA
common_peak2-20722-16-12-0.417823924126969-0.489164546851866	chr10	96621905	96622486	+	0	NA	Intergenic	Intergenic	123793	NR_045358	75301	Mm.108650	NR_045358		4930556N09Rik	-	RIKEN cDNA 4930556N09 gene	ncRNA
unique_peak2-38526-3-12--2.11442280810037-2.15846853396659	chr7	45706471	45707020	+	0	NA	Intergenic	Intergenic	813159	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak2-29584-91-153--0.193354595092563-0.545479934150534	chr6	49263009	49264212	+	0	NA	Intergenic	B2_Mm1a|SINE|B2	-5742	NM_175098	57895	Mm.32416	NM_175098	ENSMUSG00000050786	Ccdc126	6330407D12Rik|AA675040|AI465320|AL022711	coiled-coil domain containing 126	protein-coding
common_peak2-26953-10-6-0.549060422951165-1.21398586181642	chr2	164878877	164879193	+	0	NA	Intergenic	Intergenic	-2101	NM_170704	21939	Mm.271833	NM_011611	ENSMUSG00000017652	Cd40	AI326936|Bp50|GP39|HIGM1|IGM|IMD3|T-BAM|TRAP|Tnfrsf5|p50	CD40 antigen	protein-coding
common_peak1-17581-18-14-0.406028555619833-0.532159081577619	chr7	39449341	39450159	+	0	NA	Intergenic	Intergenic	-136538	NM_001013810	434171	Mm.60990	NM_001013810	ENSMUSG00000060565	Gm5591	EG434171	predicted gene 5591	protein-coding
common_peak1-16049-32-23-0.694129518498504-1.20786488037717	chr5	39760993	39762231	+	0	NA	Intergenic	Intergenic	233201	NR_045416	75095	Mm.332354	NR_045416		4930513D17Rik	-	RIKEN cDNA 4930513D17 gene	ncRNA
common_peak1-11440-28-16-0.965496278571123-1.60877160026697	chr15	100494631	100495832	+	0	NA	intron (NM_001270537, intron 1 of 10)	intron (NM_001270537, intron 1 of 10)	4700	NM_001270537	668218	Mm.451225	NM_001270537	ENSMUSG00000098112	Bin2	-	bridging integrator 2	protein-coding
common_peak1-14530-9-13--0.617741515653384-0.459837087125828	chr3	30105349	30105957	+	0	NA	Intergenic	Intergenic	-193527	NM_007963	14013	Mm.56965	NM_007963	ENSMUSG00000027684	Mecom	D630039M04Rik|Evi-1|Evi1|Jbo|Mds|Mds1|Mds1-Evi1|Prdm3|Znfpr1b1	MDS1 and EVI1 complex locus	protein-coding
common_peak2-31938-24-44--0.698643193561958-1.07959258339368	chr9	63941220	63942584	+	0	NA	Intergenic	Intergenic	13334	NR_040743	76814	Mm.243771	NR_040743		Scarletltr	2600006L11Rik	Scarletltr, erythroid developmental long intergenic non-protein coding transcript	ncRNA
common_peak1-14121-134-202-0.0792335915942486-0.376206776100133	chr2	128966560	128968372	+	0	NA	Intergenic	Intergenic	12030	NM_025395	66170	Mm.40621	NM_025395	ENSMUSG00000037938	Chchd5	1110027L01Rik|AW045710	coiled-coil-helix-coiled-coil-helix domain containing 5	protein-coding
common_peak2-27181-17-26--0.53659116395843-0.538442145997695	chr3	36151107	36151769	+	0	NA	Intergenic	(TCTA)n|Simple_repeat|Simple_repeat	-30241	NM_198192	229214	Mm.330975	NM_198192	ENSMUSG00000058400	Qrfpr	AQ27|Gpr103|SP9155	pyroglutamylated RFamide peptide receptor	protein-coding
unique_peak1-6081-7-1-1.79909083029819-1.80617997398389	chr6	121173185	121173564	+	0	NA	exon (NM_017379, exon 4 of 5)	exon (NM_017379, exon 4 of 5)	12586	NM_017379	53857	Mm.32884	NM_017379		Tuba8	-	tubulin, alpha 8	protein-coding
common_peak1-16417-19-22--0.120874629395327-0.306080386793804	chr5	129669453	129670386	+	0	NA	intron (NM_001081342, intron 15 of 25)	intron (NM_001081342, intron 15 of 25)	67294	NM_001081342	243277	Mm.440501	NM_177734	ENSMUSG00000044017	Gpr133	E230012M21Rik	G protein-coupled receptor 133	protein-coding
unique_peak2-37807-1-7--2.62705701021674-1.80617997398389	chr5	123695840	123696277	+	0	NA	intron (NM_026000, intron 4 of 5)	intron (NM_026000, intron 4 of 5)	17859	NM_026000	67151	Mm.278997	NM_026000	ENSMUSG00000029440	Psmd9	1500011J20Rik|2610202L11Rik|Bridge-1|P27	proteasome (prosome, macropain) 26S subunit, non-ATPase, 9	protein-coding
common_peak2-23459-5-5--0.289342836727009-0.909929411522249	chr15	67177041	67177320	+	0	NA	intron (NR_045140, intron 7 of 8)	RMER19A|LTR|ERVK	118849	NR_045140	69334	Mm.63770	NR_045140		1700012I11Rik	-	RIKEN cDNA 1700012I11 gene	ncRNA
common_peak2-27344-10-5-0.771452844287613-1.33892459842472	chr3	75941134	75941502	+	0	NA	intron (NM_001253719, intron 1 of 15)	intron (NM_001253719, intron 1 of 15)	61813	NM_001253719	213262	Mm.379337	NM_178673	ENSMUSG00000034098	Fstl5	9130207J01Rik	follistatin-like 5	protein-coding
unique_peak1-3071-12-2-2.06381348436648-2.79529063155376	chr18	12256176	12256864	+	0	NA	intron (NM_178801, intron 4 of 14)	L1M4|LINE|L1	23526	NR_110356	338363	Mm.271567	NM_178801	ENSMUSG00000049411	Tmem241	6030446N20Rik	transmembrane protein 241	protein-coding
unique_peak2-34192-16-35--1.05166135917425-1.68242911687175	chr13	37825667	37826859	+	0	NA	Intergenic	MER57D|LTR|ERV1	-91644	NM_026830	68750	Mm.491109	NM_026830	ENSMUSG00000039087	Rreb1	1110037N09Rik|AA414966|B930013M22Rik	ras responsive element binding protein 1	protein-coding
common_peak2-21966-10-9-0.0344872501214071-1.05503135781948	chr12	41084588	41085140	+	0	NA	intron (NM_172575, intron 5 of 12)	ORR1A4|LTR|MaLR	87513	NM_172575	246196	Mm.26852	NM_172575	ENSMUSG00000055917	Zfp277	2410017E24Rik|NIRF4	zinc finger protein 277	protein-coding
unique_peak1-6386-11-2-1.92373108353046-2.32232533660526	chr7	75559484	75560057	+	0	NA	Intergenic	Intergenic	-2540	NR_046208	71244	Mm.410787	NR_046208		4933436H12Rik	-	RIKEN cDNA 4933436H12 gene	ncRNA
common_peak1-13976-32-34-0.149809002274694-0.375453743811476	chr2	94406060	94406940	+	0	NA	Intergenic	Intergenic	-128196	NM_007466	11800	Mm.181824	NM_007466	ENSMUSG00000027193	Api5	AAC-11|AI196452	apoptosis inhibitor 5	protein-coding
unique_peak2-34449-1-7--2.62705701021674-1.80617997398389	chr14	23051876	23052220	+	0	NA	intron (NM_028275, intron 2 of 6)	intron (NM_028275, intron 2 of 6)	213114	NM_028275	76633	Mm.489898	NM_028275	ENSMUSG00000063458	1700112E06Rik	2700009F18Rik|Oca7	RIKEN cDNA 1700112E06 gene	protein-coding
common_peak2-27934-36-55--0.328033835889849-0.518540604135986	chr4	21879349	21880539	+	0	NA	intron (NM_175234, intron 3 of 5)	intron (NM_175234, intron 3 of 5)	21471	NM_175234	76132	Mm.159689	NM_175234		Faxc	6230409E13Rik|AW742931	failed axon connections homolog (Drosophila)	protein-coding
common_peak2-24195-14-16--0.188246680892695-0.308035960714963	chr16	57606514	57607101	+	0	NA	exon (NM_025599, exon 1 of 10)	exon (NM_025599, exon 1 of 10)	173	NM_025599	66497	Mm.425976	NM_025599		Cmss1	1110001A06Rik|2610528E23Rik|4930572F24Rik|AV099812|AV122629	cms small ribosomal subunit 1	protein-coding
unique_peak2-37020-4-4--0.345388608740609-0.864171920961574	chr3	126610855	126611184	+	0	NA	Intergenic	L1Md_A|LINE|L1	35285	NM_001034168	109676	Mm.220242	NM_178655	ENSMUSG00000032826	Ank2	AI835472|AW491075|Ank-2	ankyrin 2, brain	protein-coding
unique_peak1-6564-10-1-2.35641534500877-2.57096726280955	chr7	132343687	132344197	+	0	NA	Intergenic	ORR1C2-int|LTR|MaLR	149358	NR_045804	71208	Mm.159465	NM_172408		4933440M02Rik	-	RIKEN cDNA 4933440M02 gene	ncRNA
common_peak2-29385-13-13--0.0288828914198356-0.309074325783021	chr6	39206773	39207309	+	0	NA	Intergenic	Intergenic	-50269	NM_001033430	338523	Mm.293175	NM_001033430	ENSMUSG00000042599	Kdm7a	A630082K20Rik|BB041802|ENSMUSG00000073143|Jhdm1d|mKIAA1718	lysine (K)-specific demethylase 7A	protein-coding
unique_peak2-38678-5-10--1.16381195464315-1.33892459842472	chr7	100465188	100465817	+	0	NA	Intergenic	Intergenic	237113	NM_021427	58238	Mm.113787	NM_021427		Fam181b	A830059I20Rik|AB041569	family with sequence similarity 181, member B	protein-coding
unique_peak1-493-9-3-1.18961340640422-1.57096726280955	chr1	179668154	179668680	+	0	NA	intron (NM_027077, intron 2 of 5)	B2_Mm2|SINE|B2	8472	NM_027077	69428	Mm.84467	NM_027077	ENSMUSG00000015962	1700016C15Rik	-	RIKEN cDNA 1700016C15 gene	protein-coding
common_peak1-8007-12-12--0.0516637330534535-0.309718203022949	chr1	166045530	166046228	+	0	NA	intron (NM_011347, intron 1 of 15)	intron (NM_011347, intron 1 of 15)	484	NM_011347	20344	Mm.3337	NM_011347	ENSMUSG00000026580	Selp	CD62P|GMP-140|Grmp|LECAM3|PADGEM	selectin, platelet	protein-coding
unique_peak1-2751-11-1-2.50869358425161-2.83420869758413	chr17	3294937	3295503	+	0	NA	Intergenic	Intergenic	-31353	NM_001122998	24001	Mm.137134	NM_011878	ENSMUSG00000023800	Tiam2	3000002F19Rik|STEF|mKIAA2016	T cell lymphoma invasion and metastasis 2	protein-coding
unique_peak1-2054-10-5-0.771452844287613-1.33892459842472	chr15	27506709	27507210	+	0	NA	intron (NM_020332, intron 8 of 11)	intron (NM_020332, intron 8 of 11)	5710	NR_106065	102466808		NR_106065		Mir7117	mmu-mir-7117	microRNA mir-7117	ncRNA
common_peak1-16842-18-11-0.727956650507195-0.876666802405043	chr6	52679774	52680595	+	0	NA	intron (NM_025816, intron 4 of 17)	intron (NM_025816, intron 4 of 17)	16461	NM_025816	52440	Mm.389757	NM_025816	ENSMUSG00000004535	Tax1bp1	1200003J11Rik|1700069J21Rik|AA930106|D6Ertd404e|D6Ertd772e|T6bp|TXBP151	Tax1 (human T cell leukemia virus type I) binding protein 1	protein-coding
unique_peak2-35861-2-6--1.72480917832092-1.26211192963361	chr18	76043321	76043759	+	0	NA	intron (NM_145356, intron 1 of 4)	RLTR28|LTR|ERVL	63708	NM_145356	207259	Mm.159332	NM_145356	ENSMUSG00000044646	Zbtb7c	B230208J24Rik|Kr-pok|Zbtb36	zinc finger and BTB domain containing 7C	protein-coding
common_peak2-29009-17-46--1.3362925134726-2.81179020749331	chr5	110447926	110448734	+	0	NA	Intergenic	IAPEY3-int|LTR|ERVK	22784	NM_145563	69504	Mm.441438	NM_145563	ENSMUSG00000066613	Zfp932	2310001H12Rik|Znf431	zinc finger protein 932	protein-coding
common_peak1-16083-35-13-1.6240153364049-3.98058741041079	chr5	64094967	64096115	+	0	NA	intron (NM_177006, intron 1 of 6)	intron (NM_177006, intron 1 of 6)	55199	NM_177006	319807	Mm.319487	NM_028470	ENSMUSG00000090061	Nwd2	3110047P20Rik|B830017A01Rik|Hn1-ps2|mKIAA1239	NACHT and WD repeat domain containing 2	protein-coding
common_peak1-12425-17-14-0.311405742596519-0.466170754204149	chr17	75179104	75179874	+	0	NA	intron (NM_152817, intron 11 of 19)	intron (NM_152817, intron 11 of 19)	62399	NM_152817	74196	Mm.209503	NM_152817	ENSMUSG00000024078	Ttc27	2610511O17Rik	tetratricopeptide repeat domain 27	protein-coding
unique_peak2-35603-8-19--1.31670567693979-1.30305656033811	chr17	80224435	80225057	+	0	NA	Intergenic	Intergenic	70717	NM_178050	56298	Mm.175403	NM_019717	ENSMUSG00000059811	Atl2	2010110I21Rik|AA407293|AV334690|Aip-2|Arl6ip2	atlastin GTPase 2	protein-coding
unique_peak2-34694-6-6--0.241956811677302-0.947717972411649	chr15	25642857	25643246	+	0	NA	intron (NM_019472, intron 3 of 40)	B1_Mus1|SINE|Alu	90746	NM_019472	17909	Mm.60590	NM_019472	ENSMUSG00000022272	Myo10	AW048724|D15Ertd600e|mKIAA0799	myosin X	protein-coding
common_peak2-20847-83-72-0.724398066226109-3.03222807165381	chr11	59227547	59228794	+	0	NA	intron (NM_144521, intron 4 of 4)	L1M4|LINE|L1	35288	NM_144521	67826	Mm.26680	NM_144521	ENSMUSG00000009894	Snap47	1110031B06Rik|SNAP-47	synaptosomal-associated protein, 47	protein-coding
common_peak1-17572-17-9-0.896368243317676-1.09394599973099	chr7	35127382	35128077	+	0	NA	Intergenic	Intergenic	46830	NM_025948	67070	Mm.276503	NM_025948	ENSMUSG00000066568	Lsm14a	2700023B17Rik|AA407828|AU017544|Tral	LSM14 homolog A (SCD6, S. cerevisiae)	protein-coding
common_peak2-24672-38-58--0.311190390063311-0.50619083865892	chr17	36957628	36959447	+	0	NA	Intergenic	Intergenic	9417	NM_201611	399549	Mm.329034	NM_201611	ENSMUSG00000037130	H2-M10.6	-	histocompatibility 2, M region locus 10.6	protein-coding
common_peak2-32374-49-64--0.0160839900032705-0.301029995663976	chrX	103980348	103981826	+	0	NA	Intergenic	Lx2A1|LINE|L1	54895	NM_199468	213436	Mm.85581	NM_199468	ENSMUSG00000047686	Zcchc5	D430021I08Rik|Gm375|Mar3|Mart3|ZHC5	zinc finger, CCHC domain containing 5	protein-coding
common_peak1-11108-11-18--0.739233929191972-0.671582559449692	chr15	61987380	61987918	+	0	NA	intron (NR_003368, intron 3 of 8)	intron (NR_003368, intron 3 of 8)	63357	NR_003523	67552	Mm.484027	NM_026230		H2afy3	4933432H23Rik	H2A histone family, member Y3	pseudo
unique_peak2-32741-0-5--3.42509343119537-1.32905871926422	chr1	166003638	166004033	+	0	NA	intron (NM_011346, intron 7 of 8)	intron (NM_011346, intron 7 of 8)	11628	NM_001164059	20343	Mm.1461	NM_011346	ENSMUSG00000026581	Sell	AI528707|CD62L|L-selectin|LECAM-1|Lnhr|Ly-22|Ly-m22|Lyam-1|Lyam1	selectin, lymphocyte	protein-coding
unique_peak1-1860-30-9-1.84774731460451-4.06788929322894	chr14	54189911	54191290	+	0	NA	Intergenic	MMERGLN-int|LTR|ERV1	-95015	NM_001205242	100568452	Mm.213248	NM_001205242		A430107P09Rik	Va10	RIKEN cDNA A430107P09 gene	protein-coding
common_peak1-13993-114-113-0.631064507543626-3.39344160718752	chr2	103795818	103798255	+	0	NA	Intergenic	Intergenic	-1116	NM_001142337	16909	Mm.29266	NM_008505	ENSMUSG00000032698	Lmo2	Rbtn-2|Rbtn2|Rhom-2|Ttg2	LIM domain only 2	protein-coding
common_peak1-9583-9-28--1.66836758872335-2.52428350728854	chr11	118418498	118418957	+	0	NA	intron (NM_001285436, intron 3 of 13)	intron (NM_001285436, intron 3 of 13)	80453	NM_172573	217364	Mm.473963	NM_172573	ENSMUSG00000033857	Engase	C130099A03|D230014K01Rik	endo-beta-N-acetylglucosaminidase	protein-coding
unique_peak1-557-6-3-0.565398110380302-1.08602067057793	chr1	193579037	193579447	+	0	NA	intron (NM_001134829, intron 3 of 7)	B1_Mus2|SINE|Alu	36968	NM_001134829	226856	Mm.277958	NM_172266	ENSMUSG00000026623	Lpgat1	AI649174|AW112037|BC013667	lysophosphatidylglycerol acyltransferase 1	protein-coding
common_peak1-8332-9-3-1.18961340640422-1.57096726280955	chr10	44002486	44002977	+	0	NA	intron (NM_053069, intron 1 of 7)	Lx7|LINE|L1	14567	NM_053069	11793	Mm.22264	NM_053069	ENSMUSG00000038160	Atg5	2010107M05Rik|3110067M24Rik|AW319544|Apg5l|Atg5l|C88337|Paddy	autophagy related 5	protein-coding
common_peak1-16715-8-22--1.51833953810944-1.77631109801764	chr6	29317726	29318242	+	0	NA	intron (NM_007594, intron 5 of 6)	intron (NM_007594, intron 5 of 6)	12529	NM_007538	12057	Mm.56987	NM_007538	ENSMUSG00000058831	Opn1sw	AW551857|Bcp	opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan)	protein-coding
unique_peak2-36140-2-4--1.23938235115068-0.931118710592187	chr2	18026266	18026651	+	0	NA	intron (NR_045538, intron 4 of 22)	(TC)n|Simple_repeat|Simple_repeat	40246	NM_001252561	17354	Mm.209175	NM_010804	ENSMUSG00000026743	Mllt10	Af10|B130021D15Rik|D630001B22Rik|mKIAA4140	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	protein-coding
unique_peak1-5312-7-0-2.79909083029819-2.40823996531185	chr5	76964265	76964702	+	0	NA	intron (NM_027270, intron 2 of 19)	intron (NM_027270, intron 2 of 19)	6147	NM_001289770	69940	Mm.403233	NM_027270	ENSMUSG00000036435	Exoc1	2810407P21Rik|A730011E05Rik|SEC3|Sec3l1|Sec3p	exocyst complex component 1	protein-coding
common_peak2-31482-37-27-0.718638149428215-1.38733277998641	chr8	106563675	106564763	+	0	NA	Intergenic	Intergenic	-61306	NM_009868	12562	Mm.21767	NM_009868	ENSMUSG00000031871	Cdh5	7B4|AA408225|Cd144|VE-Cad|VECD|VEcad|Vec	cadherin 5	protein-coding
common_peak1-13150-21-8-1.39956426382392-2.11898024768848	chr19	10286681	10287483	+	0	NA	intron (NM_001033481, intron 21 of 25)	intron (NM_001033481, intron 21 of 25)	6559	NM_001163431	69038	Mm.375100	NM_026919	ENSMUSG00000036372	Tmem258	1810006K21Rik	transmembrane protein 258	protein-coding
common_peak2-31916-11-7-0.508693584251613-1.21681515183528	chr9	61322755	61323115	+	0	NA	Intergenic	(GA)n|Simple_repeat|Simple_repeat	102762	NM_001083927	21887	Mm.24255	NM_009389	ENSMUSG00000032280	Tle3	2610103N05Rik|ESG|Grg3a|Grg3b|mKIAA1547	transducin-like enhancer of split 3, homolog of Drosophila E(spl)	protein-coding
common_peak2-19988-12-28--1.20920501003993-1.52081014994907	chr1	134078159	134079071	+	0	NA	Intergenic	RLTR42-int|LTR|ERVK	-9398	NM_001033250	213409	Mm.426321	NM_001033250	ENSMUSG00000079330	Lemd1	4930540I23Rik|6430514M23Rik|AI428128|LEMP-1	LEM domain containing 1	protein-coding
common_peak1-15255-28-27-0.245604197763859-0.431536360747188	chr4	15265832	15266817	+	0	NA	Intergenic	Intergenic	73357	NM_181401	100201	Mm.394111	NM_181401	ENSMUSG00000043252	Tmem64	9630015D15Rik|AI790744|AV300874	transmembrane protein 64	protein-coding
common_peak2-30952-29-27-0.304935158557507-0.525808162491371	chr8	66486041	66486992	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-55549	NM_001195687	244495	Mm.485331	NM_001195687	ENSMUSG00000094443	Gm4975	EG244495|Sgo2B	predicted gene 4975	protein-coding
unique_peak1-5057-16-5-1.53330114154691-1.80287260729378	chr4	135958022	135958723	+	0	NA	Intergenic	ID_B1|SINE|B4	-21067	NM_001285482	15552	Mm.40573	NM_008309	ENSMUSG00000070687	Htr1d	5-HT-1D|5-HT1D|AI853647|Gpcr14|Htr1db	5-hydroxytryptamine (serotonin) receptor 1D	protein-coding
unique_peak1-1140-36-8-2.30939608472544-6.48828169283917	chr11	96969129	96970526	+	0	NA	intron (NM_019507, intron 1 of 5)	B1F|SINE|Alu	6818	NM_019507	57765	Mm.94519	NM_019507	ENSMUSG00000001444	Tbx21	TBT1|Tbet|Tblym	T-box 21	protein-coding
common_peak2-24520-12-7-0.648775985087639-0.697979855752659	chr17	26614953	26615397	+	0	NA	Intergenic	Intergenic	30242	NM_013642	19252	Mm.239041	NM_013642	ENSMUSG00000024190	Dusp1	3CH134|MKP1|Ptpn16|U19515|erp|mkp-1	dual specificity phosphatase 1	protein-coding
common_peak1-16975-18-15-0.312919151228352-0.456667090758524	chr6	86584646	86585571	+	0	NA	Intergenic	ID_B1|SINE|B4	6940	NM_026414	67855	Mm.183043	NM_026414	ENSMUSG00000033508	Asprv1	2300003P22Rik|AA986851|SASP|SASPase|Taps	aspartic peptidase, retroviral-like 1	protein-coding
unique_peak1-5619-25-7-1.86184990534511-3.43644803111449	chr6	135298794	135299765	+	0	NA	Intergenic	Intergenic	-13670	NM_010128	13730	Mm.182785	NM_010128	ENSMUSG00000030208	Emp1	I-8-09|TMP	epithelial membrane protein 1	protein-coding
common_peak1-10728-12-13--0.158578936969966-0.301029995663979	chr14	63544067	63544699	+	0	NA	intron (NM_175546, intron 4 of 11)	intron (NM_175546, intron 4 of 11)	58964	NM_001037751	432867	Mm.99387	NM_001037751	ENSMUSG00000075574	Defb48	Defb42|EG432867	defensin beta 48	protein-coding
unique_peak1-2923-11-5-0.923731083530457-1.477227296591	chr17	49750437	49751076	+	0	NA	Intergenic	Intergenic	-3741	NM_177052	319991	Mm.441340	NM_177052	ENSMUSG00000023999	Kif6	D130004B10Rik|D130084M03Rik	kinesin family member 6	protein-coding
common_peak1-8690-43-54-0.0012034719990428-0.303022200133692	chr11	51755658	51757198	+	0	NA	Intergenic	Intergenic	-24705	NM_029976	52626	Mm.289456	NM_029976	ENSMUSG00000020392	Cdkn2aipnl	A430101B06Rik|AA409260|D11Ertd497e|MNCb-1520	CDKN2A interacting protein N-terminal like	protein-coding
common_peak1-16933-10-7-0.356415345008769-1.12966497611638	chr6	83120911	83121391	+	0	NA	intron (NM_001198866, intron 1 of 31)	intron (NM_001198866, intron 1 of 31)	5233	NM_001198867	13191	Mm.6919	NM_007835	ENSMUSG00000031865	Dctn1	AL022633|Glued|p150|p150<glued>	dynactin 1	protein-coding
unique_peak1-2422-16-6-1.31090872021046-1.49151883326344	chr15	100754795	100755581	+	0	NA	intron (NM_001077499, intron 1 of 26)	Lx9|LINE|L1	-11514	NM_011323	20273	Mm.385012	NM_011323	ENSMUSG00000023033	Scn8a	AI853486|C630029C19Rik|NaCh6|Nav1.6|dmu|med|mnd-2|mnd2|nmf2|nmf335|nmf58|nur14|seal	sodium channel, voltage-gated, type VIII, alpha	protein-coding
unique_peak2-33433-1-5--2.2120195109379-1.32905871926422	chr11	60933260	60933674	+	0	NA	Intergenic	Intergenic	-20870	NM_021349	57916	Mm.265915	NM_021349	ENSMUSG00000010142	Tnfrsf13b	1200009E08Rik|Taci	tumor necrosis factor receptor superfamily, member 13b	protein-coding
common_peak2-20262-30-29-0.262784813883354-0.465043498729215	chr1	186749303	186750174	+	0	NA	exon (NM_145515, exon 6 of 18)	exon (NM_145515, exon 6 of 18)	-42823	NM_178692	226777	Mm.169542	NM_178692	ENSMUSG00000039349	C130074G19Rik	-	RIKEN cDNA C130074G19 gene	protein-coding
unique_peak1-3250-10-3-1.35641534500877-1.75805390616669	chr18	64960075	64960483	+	0	NA	Intergenic	MTD|LTR|MaLR	-87131	NM_001114386	83814	Mm.98668	NM_031881	ENSMUSG00000024589	Nedd4l	1300012C07Rik|Nedd4-2|Nedd4b	neural precursor cell expressed, developmentally down-regulated gene 4-like	protein-coding
common_peak1-12039-70-109--0.161392797149261-0.428021281918605	chr17	20944552	20946422	+	0	NA	Intergenic	Lx2B|LINE|L1	-5972	NM_134190	171224	Mm.377183	NM_134190	ENSMUSG00000061150	Vmn1r229	V1re1	vomeronasal 1 receptor 229	protein-coding
unique_peak1-2997-18-8-1.14299414978604-1.45476480588849	chr17	83822909	83823833	+	0	NA	intron (NM_199466, intron 3 of 20)	B1_Mur3|SINE|Alu	73100	NM_001114362	78798	Mm.295565	NM_199466	ENSMUSG00000032624	Eml4	4930443C24Rik|AI644019	echinoderm microtubule associated protein like 4	protein-coding
common_peak2-29923-9-8-0.0196884049619079-1.03275496310833	chr6	115500830	115501212	+	0	NA	intron (NM_199033, intron 3 of 11)	MT2A|LTR|ERVL	6299	NM_199033	381802	Mm.291208	NM_199033	ENSMUSG00000042389	Tsen2	AU067695	tRNA splicing endonuclease 2 homolog (S. cerevisiae)	protein-coding
common_peak2-22612-26-70--1.22184802734622-3.87453000464995	chr13	74808011	74809031	+	0	NA	intron (NM_030711, intron 12 of 18)	intron (NM_030711, intron 12 of 18)	31201	NM_030711	80898	Mm.83526	NM_030711	ENSMUSG00000021583	Erap1	Arts1|ERAAP|PILSA|PILSAP	endoplasmic reticulum aminopeptidase 1	protein-coding
common_peak1-16228-9-7-0.18961340640422-1.05908390183068	chr5	100572021	100572528	+	0	NA	intron (NM_182841, intron 1 of 7)	intron (NM_182841, intron 1 of 7)	16553	NM_182841	231503	Mm.99790	NM_182841	ENSMUSG00000050640	Tmem150c	-	transmembrane protein 150C	protein-coding
unique_peak2-34639-6-9--0.75652998450706-1.11707584880836	chr14	99579536	99580091	+	0	NA	intron (NM_029320, intron 11 of 17)	B3|SINE|B2	-80824	NM_028315	72662	Mm.163339	NM_028315	ENSMUSG00000033166	Dis3	2810028N01Rik	DIS3 mitotic control homolog (S. cerevisiae)	protein-coding
common_peak1-15426-9-14--0.717277189204299-0.53895475198017	chr4	88950102	88950567	+	0	NA	Intergenic	Intergenic	6607	NM_007670	12579	Mm.423094	NM_007670	ENSMUSG00000073802	Cdkn2b	AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b	cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)	protein-coding
unique_peak2-37877-2-9--2.23938235115068-1.87199725847353	chr5	138994059	138994593	+	0	NA	Intergenic	Intergenic	11596	NM_029693	76658	Mm.73235	NM_029693	ENSMUSG00000029526	1700123K08Rik	-	RIKEN cDNA 1700123K08 gene	protein-coding
common_peak1-8441-21-46--0.985099586411402-1.82819694957564	chr10	78574349	78575038	+	0	NA	Intergenic	Intergenic	-14348	NM_001004362	72128	Mm.297854	NM_001004362	ENSMUSG00000060301	2610008E11Rik	-	RIKEN cDNA 2610008E11 gene	protein-coding
common_peak1-18025-12-16--0.4386868561627-0.368541233333383	chr7	142387405	142388054	+	0	NA	promoter-TSS (NR_046050)	promoter-TSS (NR_046050)	-44	NR_046050	74314	Mm.415339	NR_046050		1700120G07Rik	-	RIKEN cDNA 1700120G07 gene	ncRNA
common_peak1-14036-13-14--0.12841856497075-0.301029995663977	chr2	117749002	117749764	+	0	NA	Intergenic	L1M1|LINE|L1	101719	NR_040631	73938	Mm.399107	NR_040631	ENSMUSG00000086221	4930412B13Rik	-	RIKEN cDNA 4930412B13 gene	ncRNA
unique_peak1-1713-18-0-4.31291915122835-NA	chr13	94328125	94328925	+	0	NA	Intergenic	Intergenic	-58762	NM_021310	57748	Mm.100273	NM_021310	ENSMUSG00000021690	Jmy	-	junction-mediating and regulatory protein	protein-coding
common_peak2-30701-20-25--0.212364933549899-0.342639663781856	chr7	112187528	112188664	+	0	NA	Intergenic	RLTR10-int|LTR|ERVK	4382	NM_147095	259099	Mm.377841	NM_147095	ENSMUSG00000073915	Olfr676	MOR32-1	olfactory receptor 676	protein-coding
common_peak1-19010-26-25-0.22745937401737-0.399869693390336	chr9	61372663	61373495	+	0	NA	Intergenic	L1MEe|LINE|L1	152906	NM_001083927	21887	Mm.24255	NM_009389	ENSMUSG00000032280	Tle3	2610103N05Rik|ESG|Grg3a|Grg3b|mKIAA1547	transducin-like enhancer of split 3, homolog of Drosophila E(spl)	protein-coding
common_peak1-18939-30-48--0.445034434623335-0.674559023890888	chr9	46012738	46013558	+	0	NA	intron (NM_027498, intron 15 of 24)	intron (NM_027498, intron 15 of 24)	-23565	NM_009692	11806	Mm.26743	NM_009692	ENSMUSG00000032083	Apoa1	Alp-1|Apoa-1|Brp-14|Ltw-1|Lvtw-1|Sep-1|Sep-2|Sep2|apo-AI|apoA-I	apolipoprotein A-I	protein-coding
unique_peak2-33131-1-7--2.62705701021674-1.80617997398389	chr10	81771282	81771619	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-67430	NM_001105557	237411		NM_172789	ENSMUSG00000062931	Zfp938	B230315N10Rik	zinc finger protein 938	protein-coding
common_peak2-22394-42-28-0.884348332739612-2.12244165266811	chr13	32929127	32930187	+	0	NA	Intergenic	Intergenic	13397	NM_025429	66222	Mm.20144	NM_025429	ENSMUSG00000044734	Serpinb1a	1190005M04Rik|AI325983|EI|EIA|ELANH2|LEI|M/NEI|MNEI|PI2	serine (or cysteine) peptidase inhibitor, clade B, member 1a	protein-coding
common_peak1-9834-17-6-1.41094141614743-1.84350559086818	chr12	76318477	76319483	+	0	NA	Intergenic	Intergenic	-40661	NM_172805	238271	Mm.44465	NM_172805	ENSMUSG00000034402	Kcnh5	Eag2	potassium voltage-gated channel, subfamily H (eag-related), member 5	protein-coding
common_peak2-30421-6-11--1.01956439034085-1.32595962126035	chr7	41499030	41499380	+	0	NA	Intergenic	Intergenic	-2185993	NM_001013810	434171	Mm.60990	NM_001013810	ENSMUSG00000060565	Gm5591	EG434171	predicted gene 5591	protein-coding
unique_peak2-39055-6-10--0.894033508256995-1.21398586181642	chr8	70679314	70679854	+	0	NA	Intergenic	Intergenic	-120843	NM_028182	72281	Mm.40974	NM_028182	ENSMUSG00000053886	Sh2d4a	2210402M20Rik|SH2A	SH2 domain containing 4A	protein-coding
unique_peak2-32441-4-43--3.48289213249054-8.50822402412643	chr1	62766603	62767777	+	0	NA	intron (NM_001077403, intron 2 of 16)	intron (NM_001077403, intron 2 of 16)	17299	NM_001077405	18187	Mm.266341	NM_010939	ENSMUSG00000025969	Nrp2	1110048P06Rik|Np-2|Np2|Npn-2|Npn2	neuropilin 2	protein-coding
common_peak2-23261-12-24--0.995080204687086-1.0220094258199	chr15	25577252	25577953	+	0	NA	intron (NM_019472, intron 1 of 40)	intron (NM_019472, intron 1 of 40)	25297	NM_019472	17909	Mm.60590	NM_019472	ENSMUSG00000022272	Myo10	AW048724|D15Ertd600e|mKIAA0799	myosin X	protein-coding
common_peak1-18400-10-5-0.771452844287613-1.33892459842472	chr8	71789106	71789669	+	0	NA	Intergenic	Intergenic	-5592	NM_172491	211135	Mm.294970	NM_172491		D130040H23Rik	-	RIKEN cDNA D130040H23 gene	protein-coding
common_peak2-20263-38-34-0.442169642353564-0.82261631811054	chr1	187215096	187216088	+	0	NA	intron (NM_029735, intron 12 of 31)	intron (NM_029735, intron 12 of 31)	28618	NM_029735	107508	Mm.154511	NM_029735	ENSMUSG00000026615	Eprs	2410081F06Rik|3010002K18Rik|C79379|Qprs	glutamyl-prolyl-tRNA synthetase	protein-coding
unique_peak2-39373-8-12--0.695217300193522-0.475924844171029	chr9	15279335	15279919	+	0	NA	Intergenic	B4A|SINE|B4	-30312	NM_133214	170748	Mm.86572	NM_133214	ENSMUSG00000058173	Smco4	Fn5	single-pass membrane protein with coiled-coil domains 4	protein-coding
unique_peak1-5034-15-2-2.4272022498345-3.53487848679804	chr4	133049148	133049860	+	0	NA	intron (NM_001081156, intron 1 of 1)	intron (NM_001081156, intron 1 of 1)	4961	NM_001081156	69539	Mm.151594	NM_001081156	ENSMUSG00000056596	Trnp1	2300002D11Rik|Trnp	TMF1-regulated nuclear protein 1	protein-coding
common_peak1-13505-12-7-0.648775985087639-0.697979855752659	chr2	75611869	75612408	+	0	NA	Intergenic	Intergenic	-58096	NM_172666	228061	Mm.31227	NM_172666	ENSMUSG00000042410	Agps	5832437L22|9930035G10Rik|AW123847|Adaps|Adas|Adhaps|Adps|Aldhpsy|bs2	alkylglycerone phosphate synthase	protein-coding
common_peak2-23860-18-12-0.612479433087259-0.739965416525508	chr15	102325940	102326659	+	0	NA	intron (NM_001103166, intron 13 of 13)	intron (NM_001103166, intron 13 of 13)	21136	NM_001163643	26404	Mm.172897	NM_009582	ENSMUSG00000023050	Map3k12	DLK|MUK|Zpk	mitogen-activated protein kinase kinase kinase 12	protein-coding
common_peak2-28187-12-9-0.326847890200276-0.459837087125828	chr4	115827920	115828526	+	0	NA	intron (NM_001290658, intron 13 of 20)	intron (NM_001290658, intron 13 of 20)	4187	NM_001290658	68273	Mm.196045	NM_026651	ENSMUSG00000028700	Pomgnt1	0610016I07Rik|4930467B06Rik	protein O-linked mannose beta 1,2-N-acetylglucosaminyltransferase	protein-coding
common_peak1-7995-7-13--1.00826409175941-0.697979855752659	chr1	163380048	163380564	+	0	NA	Intergenic	RLTR31A_Mm|LTR|ERVK	-44482	NM_183391	240873	Mm.276823	NM_183391	ENSMUSG00000066755	Tnfsf18	Gitrl	tumor necrosis factor (ligand) superfamily, member 18	protein-coding
common_peak1-14001-47-111--0.872513497291056-3.50326696274614	chr2	104711560	104712996	+	0	NA	Intergenic	B1F|SINE|Alu	-14203	NM_177600	211936	Mm.416538	NM_177600	ENSMUSG00000045106	Ccdc73	2210415I11Rik|4931417A20|AV080665|BC095976	coiled-coil domain containing 73	protein-coding
common_peak1-18220-93-174--0.34014124832606-1.20503843361496	chr8	25596468	25598104	+	0	NA	Intergenic	Intergenic	-47868	NM_026931	69068	Mm.25775	NM_026931	ENSMUSG00000056313	1810011O10Rik	1110065B09Rik|AW121743|AW321058	RIKEN cDNA 1810011O10 gene	protein-coding
unique_peak1-143-7-1-1.79909083029819-1.80617997398389	chr1	71474126	71474642	+	0	NA	Intergenic	Intergenic	-12900	NM_175210	74591	Mm.159251	NM_175210	ENSMUSG00000050296	Abca12	4832428G11Rik|4833417A11Rik	ATP-binding cassette, sub-family A (ABC1), member 12	protein-coding
unique_peak2-36427-14-39--1.42271193452972-2.70027529094734	chr2	129197777	129198615	+	0	NA	intron (NR_015474, intron 1 of 2)	intron (NR_015474, intron 1 of 2)	-1340	NM_008361	16176	Mm.222830	NM_008361	ENSMUSG00000027398	Il1b	IL-1beta|Il-1b	interleukin 1 beta	protein-coding
unique_peak2-34343-8-11--0.579740082773585-1.14218153353838	chr13	99307562	99308033	+	0	NA	Intergenic	Intergenic	99568	NM_026685	68344	Mm.28766	NM_026685	ENSMUSG00000046082	Tmem174	0610009B10Rik|AA986094	transmembrane protein 174	protein-coding
unique_peak1-7423-17-2-2.63333383748388-3.75443312462699	chrX	153669547	153670212	+	0	NA	intron (NM_011077, intron 14 of 21)	L1_Rod|LINE|L1	183339	NM_011077	18675	Mm.2529	NM_011077	ENSMUSG00000057457	Phex	Gy|HPDR|HPDR1|Hyp|PEX	phosphate regulating endopeptidase homolog, X-linked	protein-coding
common_peak1-10072-9-15--0.81038659359578-0.630231561310125	chr13	23535575	23536099	+	0	NA	Intergenic	Intergenic	-12951	NR_015492	320842	Mm.487476	NR_015492	ENSMUSG00000085024	C230035I16Rik	-	RIKEN cDNA C230035I16 gene	ncRNA
common_peak2-25263-26-37--0.320028421285123-0.460129356264038	chr18	67369820	67370641	+	0	NA	intron (NM_010307, intron 5 of 11)	intron (NM_010307, intron 5 of 11)	5217	NM_024190	67064	Mm.73777	NM_024190		Chmp1b	2810405I11Rik|Chmp1b1	charged multivesicular body protein 1B	protein-coding
common_peak1-12943-56-57-0.377614830311671-0.835692031846851	chr19	34551482	34553863	+	0	NA	Intergenic	Intergenic	-3047	NM_009890	12642	Mm.30824	NM_009890	ENSMUSG00000050370	Ch25h	AI462618|m25OH	cholesterol 25-hydroxylase	protein-coding
common_peak1-7608-24-28--0.0647710923598552-0.301029995663979	chr1	58761308	58762303	+	0	NA	Intergenic	RLTR10-int|LTR|ERVK	-6530	NM_001289704	12633	Mm.336848	NM_009805	ENSMUSG00000026031	Cflar	2310024N18Rik|A430105C05Rik|CLARP|Cash|Casper|ENSMUSG00000072980|FLAME|FLAME-1|Flip|Gm9845|I-FLICE|MRIT|c-Flip	CASP8 and FADD-like apoptosis regulator	protein-coding
unique_peak1-5918-7-4-0.477162735410827-1.09384600808989	chr6	88986313	88986834	+	0	NA	Intergenic	Intergenic	-59536	NM_175017	232217	Mm.281744	NM_175017	ENSMUSG00000055403	4933427D06Rik	-	RIKEN cDNA 4933427D06 gene	protein-coding
unique_peak1-4843-18-7-1.31291915122835-1.71830443967823	chr3	152489176	152490026	+	0	NA	intron (NM_012028, intron 4 of 4)	ORR1B1-int|LTR|MaLR	112537	NM_025662	329777	Mm.331447	NM_025662	ENSMUSG00000039047	Pigk	3000001O05Rik	phosphatidylinositol glycan anchor biosynthesis, class K	protein-coding
common_peak1-8482-9-14--0.717277189204299-0.53895475198017	chr10	80621435	80621960	+	0	NA	intron (NM_021501, intron 2 of 10)	intron (NM_021501, intron 2 of 10)	8768	NM_021501	59004	Mm.34428	NM_021501		Pias4	PIASY|Pias-gamma|Piasg	protein inhibitor of activated STAT 4	protein-coding
common_peak1-9033-117-169-0.0996329190102614-0.405606287211558	chr11	62456593	62459194	+	0	NA	intron (NM_198861, intron 1 of 3)	intron (NM_198861, intron 1 of 3)	4132	NM_198861	192976	Mm.339972	NM_198861	ENSMUSG00000046417	Lrrc75a	Fam211a	leucine rich repeat containing 75A	protein-coding
unique_peak2-36543-1-14--3.53394760582526-3.64038867156802	chr2	165595018	165595717	+	0	NA	intron (NM_001271962, intron 15 of 15)	intron (NM_001271962, intron 15 of 15)	88306	NM_001252585	228880	Mm.227598	NM_027230	ENSMUSG00000039671	Zmynd8	1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7	zinc finger, MYND-type containing 8	protein-coding
unique_peak1-6200-42-1-4.74232932786718-14.6869948654398	chr6	149117825	149119739	+	0	NA	intron (NM_001113424, intron 4 of 6)	L1Md_F2|LINE|L1	18452	NM_001113424	232566	Mm.209147	NM_001113424	ENSMUSG00000068250	Amn1	5830467E07Rik|A230083D09|C730024G19Rik	antagonist of mitotic exit network 1	protein-coding
common_peak2-22721-8-7-0.00522241794757061-1.00793137938329	chr13	104109088	104109419	+	0	NA	intron (NM_175171, intron 1 of 28)	intron (NM_175171, intron 1 of 28)	15319	NM_175171	328329	Mm.202606	NM_175171	ENSMUSG00000034751	Mast4	4930420O11Rik|AI642422|mKIAA0303	microtubule associated serine/threonine kinase family member 4	protein-coding
common_peak2-20871-16-17--0.0516613591742505-0.301029995663984	chr11	101301763	101302513	+	0	NA	Intergenic	B3A|SINE|B2	-1421	NM_011289	19942	Mm.340658	NM_011289	ENSMUSG00000063316	Rpl27	-	ribosomal protein L27	protein-coding
common_peak1-17477-34-28-0.524087531873694-0.913161965438643	chr7	24364776	24366003	+	0	NA	Intergenic	Lx4B|LINE|L1	3185	NM_001166843	100043103	Mm.480300	NM_001166843	ENSMUSG00000094602	Vmn1r169	Gm4232	vomeronasal 1 receptor 169	protein-coding
unique_peak1-2827-22-9-1.32535601020004-2.00244947055753	chr17	27063301	27064314	+	0	NA	intron (NM_053173, intron 10 of 10)	B1_Mus1|SINE|Alu	-6265	NM_009343	21652	Mm.258953	NM_009343	ENSMUSG00000024193	Phf1	AW557215|D17Ertd455e|PHF2|Tctex-3|Tctex3|mPcl1	PHD finger protein 1	protein-coding
common_peak1-16004-18-27--0.494435770829252-0.528262014464654	chr5	34168936	34170111	+	0	NA	Intergenic	Intergenic	-16238	NM_175231	107823	Mm.19892	NM_175231	ENSMUSG00000057406	Whsc1	5830445G22Rik|9430010A17Rik|AW555663|C130020C13Rik|D030027O06Rik|D930023B08Rik|MMSET|NSD2|Whsc1l|mKIAA1090	Wolf-Hirschhorn syndrome candidate 1 (human)	protein-coding
common_peak1-12490-32-70--0.870655100285022-2.24219372254142	chr17	87169617	87170697	+	0	NA	intron (NM_010137, intron 1 of 15)	intron (NM_010137, intron 1 of 15)	16953	NM_010137	13819	Mm.1415	NM_010137	ENSMUSG00000024140	Epas1	HIF-2alpha|HIF2A|HLF|HRF|MOP2|bHLHe73	endothelial PAS domain protein 1	protein-coding
unique_peak2-34794-6-27--2.2419568116773-3.43978897119959	chr15	66968457	66969653	+	0	NA	intron (NM_009177, intron 2 of 8)	intron (NM_009177, intron 2 of 8)	39389	NM_009177	20442	Mm.248334	NM_009177	ENSMUSG00000013846	St3gal1	5330418N22Rik|AI467004|ST3GalI|Siat4|Siat4a|St3gal-1	ST3 beta-galactoside alpha-2,3-sialyltransferase 1	protein-coding
common_peak1-15148-10-10--0.103016273628528-0.301029995663987	chr3	145618275	145618804	+	0	NA	Intergenic	Intergenic	17543	NM_025555	66421	Mm.25137	NM_025555		2410004B18Rik	4930572C24Rik	RIKEN cDNA 2410004B18 gene	protein-coding
unique_peak1-2007-9-2-1.60465090568306-1.87199725847353	chr15	5115281	5115690	+	0	NA	intron (NM_001013367, intron 3 of 8)	intron (NM_001013367, intron 3 of 8)	-20075	NM_026213	67515	Mm.254979	NM_026213	ENSMUSG00000022151	Ttc33	2410099M07Rik|2900001O04Rik|AI507072|AW538342|Osrf	tetratricopeptide repeat domain 33	protein-coding
unique_peak1-5777-8-1-2.00522241794757-2.05605744720049	chr6	54221037	54221435	+	0	NA	non-coding (NR_033635, exon 14 of 14)	non-coding (NR_033635, exon 14 of 14)	-1580	NM_023543	69993	Mm.321147	NM_023543	ENSMUSG00000004633	Chn2	1700026N20Rik|4930557O16Rik|ARHGAP3|Bch	chimerin 2	protein-coding
common_peak1-11763-34-38-0.0966663081390173-0.344477557577616	chr16	38562496	38563568	+	0	NA	5' UTR (NM_026407, exon 1 of 9)	5' UTR (NM_026407, exon 1 of 9)	105	NM_026407	67846	Mm.310476	NM_026407	ENSMUSG00000002845	Tmem39a	2610033C09Rik	transmembrane protein 39a	protein-coding
common_peak2-30453-12-20--0.743541437691122-0.625923329873571	chr7	45526367	45527253	+	0	NA	Intergenic	Intergenic	993094	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak2-29727-8-6-0.197867495889966-1.03789460276074	chr6	84320539	84320856	+	0	NA	Intergenic	Intergenic	53135	NR_046063	100038556	Mm.387783	NR_046063		Gm10445	ENSMUSG00000072956	predicted gene 10445	ncRNA
common_peak1-18246-67-131--0.499982636575458-1.70764686396438	chr8	33599272	33600424	+	0	NA	Intergenic	Intergenic	337481	NR_046039	666589	Mm.367675	NR_046039		Gm8179	EG666589	predicted gene 8179	ncRNA
common_peak1-10910-21-32--0.474904854092218-0.550049347815239	chr15	4026714	4027615	+	0	NA	intron (NM_024188, intron 7 of 16)	intron (NM_024188, intron 7 of 16)	-49758	NR_028266	414066	Mm.394461	NR_028266		BC037032	-	cDNA Sequence BC037032	ncRNA
common_peak2-31658-96-137-0.0575267575771594-0.338899446058961	chr8	126592105	126594643	+	0	NA	Intergenic	Intergenic	46001	NM_001029876	382038	Mm.334891	NM_001029876	ENSMUSG00000031976	Urb2	C77575|mKIAA0133	URB2 ribosome biogenesis 2 homolog (S. cerevisiae)	protein-coding
unique_peak1-2772-7-0-2.79909083029819-2.40823996531185	chr17	6178624	6179192	+	0	NA	intron (NM_054040, intron 2 of 13)	intron (NM_054040, intron 2 of 13)	40760	NM_054040	68842	Mm.449307	NM_054040	ENSMUSG00000034377	Tulp4	1110057P05Rik|2210038L17Rik|Tusp	tubby like protein 4	protein-coding
unique_peak2-39669-1-5--2.2120195109379-1.32905871926422	chr9	107951023	107951350	+	0	NA	promoter-TSS (NM_177910)	promoter-TSS (NM_177910)	-435	NM_177910	331026	Mm.22554	NM_177910	ENSMUSG00000070284	Gmppb	AI317178|E430010H19	GDP-mannose pyrophosphorylase B	protein-coding
common_peak2-24164-26-45--0.595662863898551-0.956885677565398	chr16	44745660	44746518	+	0	NA	intron (NM_001159329, intron 1 of 5)	CpG	387	NM_001159329	66067	Mm.34520	NM_025332		Gtpbp8	0610037H22Rik	GTP-binding protein 8 (putative)	protein-coding
common_peak1-18365-49-36-0.796830457396234-2.0264379246532	chr8	70460914	70462526	+	0	NA	intron (NM_177698, intron 3 of 14)	intron (NM_177698, intron 3 of 14)	-26875	NM_030263	234353	Mm.32525	NM_027626	ENSMUSG00000030465	Psd3	4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D	pleckstrin and Sec7 domain containing 3	protein-coding
unique_peak1-4902-7-6--0.00826409175941478-0.97990265578305	chr4	45506802	45507243	+	0	NA	intron (NM_001033306, intron 1 of 5)	intron (NM_001033306, intron 1 of 5)	36678	NM_001033306	230126	Mm.251716	NM_001033306	ENSMUSG00000044813	Shb	BC028832	src homology 2 domain-containing transforming protein B	protein-coding
common_peak2-26646-39-33-0.528298405668814-0.983321682013132	chr2	119896826	119897813	+	0	NA	Intergenic	Intergenic	38150	NM_145378	211429	Mm.41467	NM_145378		Pla2g4b	A030011C02Rik|Gm1013|cPLA2-beta	phospholipase A2, group IVB (cytosolic)	protein-coding
common_peak1-18978-26-37--0.320028421285123-0.460129356264038	chr9	56160128	56161109	+	0	NA	intron (NM_172924, intron 3 of 6)	intron (NM_172924, intron 3 of 6)	105239	NM_172924	244895	Mm.490331	NM_172924	ENSMUSG00000074305	Peak1	1110049L02Rik|9530046P14|AA690169|BE132841|C230081A13Rik|SGK269|mKIAA2002	pseudopodium-enriched atypical kinase 1	protein-coding
unique_peak2-38673-1-4--1.94898510510411-1.10720996964787	chr7	99585950	99586166	+	0	NA	intron (NM_001243046, intron 12 of 14)	intron (NM_001243046, intron 12 of 14)	-123601	NM_025515	66365	Mm.21173	NM_025515	ENSMUSG00000030613	Ccdc90b	2310015N07Rik|C86558	coiled-coil domain containing 90B	protein-coding
common_peak2-31547-10-6-0.549060422951165-1.21398586181642	chr8	111717029	111717372	+	0	NA	Intergenic	Intergenic	147608	NR_002928	384864	Mm.390083	NR_002928		Gm1943	-	WD repeat domain 70 pseudogene	pseudo
unique_peak1-5145-28-8-1.88303411837915-3.85480160428389	chr5	17425647	17426853	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-31473	NM_001159558	12491	Mm.18628	NM_007643	ENSMUSG00000002944	Cd36	FAT|GPIV|Scarb3	CD36 antigen	protein-coding
common_peak2-27845-130-301--0.546473656495217-4.09987863606409	chr3	152209408	152211357	+	0	NA	intron (NM_001081277, intron 6 of 13)	L1_Mus3|LINE|L1	-119495	NR_040386	99542	Mm.394921	NR_040386	ENSMUSG00000097745	AI115009	-	expressed sequence AI115009	ncRNA
common_peak2-31675-8-8--0.164702583494742-1.00793137938329	chr8	126841458	126841909	+	0	NA	intron (NM_139272, intron 3 of 15)	intron (NM_139272, intron 3 of 15)	86389	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
common_peak1-15744-10-7-0.356415345008769-1.12966497611638	chr4	149136579	149137117	+	0	NA	intron (NM_027460, intron 1 of 6)	intron (NM_027460, intron 1 of 6)	11528	NM_027460	70556	Mm.41877	NM_027460	ENSMUSG00000028982	Slc25a33	5730438N18Rik|Pnc1	solute carrier family 25, member 33	protein-coding
unique_peak1-2884-7-0-2.79909083029819-2.40823996531185	chr17	40869985	40870331	+	0	NA	Intergenic	B2_Mm2|SINE|B2	6089	NM_001038500	619517	Mm.391018	NM_001038500	ENSMUSG00000073396	Esp1	EG619517|Gm6084	exocrine gland secreted peptide 1	protein-coding
common_peak1-12596-94-131-0.0851954484908628-0.365945719497339	chr18	24204891	24206751	+	0	NA	Intergenic	Intergenic	-26549	NM_021559	59057	Mm.417427	NM_021559		Zfp191	3526401F17Rik|5033419P20Rik|AI480505|AI642085|AL024422|KOX17|ZF-12|Znf191|Znf24|Znp191	zinc finger protein 191	protein-coding
unique_peak1-1942-9-2-1.60465090568306-1.87199725847353	chr14	79488869	79489390	+	0	NA	intron (NM_027906, intron 29 of 44)	intron (NM_027906, intron 29 of 44)	158045	NM_001033215	105590	Mm.486536	NM_001033215	ENSMUSG00000071262	Zfp957	AU017455	zinc finger protein 957	protein-coding
common_peak2-27108-30-53--0.585212092671595-1.01050013482523	chr3	9609055	9610138	+	0	NA	exon (NM_133218, exon 1 of 9)	exon (NM_133218, exon 1 of 9)	489	NM_133218	170753	Mm.212908	NM_133218	ENSMUSG00000040209	Zfp704	C030026M03|C030034L19Rik|Gig1|Znf704	zinc finger protein 704	protein-coding
common_peak2-30076-135-155-0.472083184178213-2.48886138481541	chr6	133104995	133105929	+	0	NA	Intergenic	L1_Mus1|LINE|L1	50205	NR_073368	381820	Mm.291762	NM_001163445	ENSMUSG00000072704	2700089E24Rik	AI662692	RIKEN cDNA 2700089E24 gene	protein-coding
unique_peak2-38505-5-7--0.704380336005853-1.01466476204226	chr7	43579063	43579502	+	0	NA	Intergenic	Intergenic	2940622	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak2-38410-3-8--1.58390809140159-1.39487600375387	chr7	23357108	23357522	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-6953	NM_001167163	100042976	Mm.482052	NM_001167163	ENSMUSG00000095837	Gm4141	Vmn1r106	predicted gene 4141	protein-coding
common_peak2-28174-15-24--0.631691439219068-0.650819692678081	chr4	109201725	109202371	+	0	NA	intron (NM_026291, intron 1 of 4)	intron (NM_026291, intron 1 of 4)	1761	NM_001199090	67646	Mm.45820	NM_026291	ENSMUSG00000060491	4930522H14Rik	1700007J23Rik	RIKEN cDNA 4930522H14 gene	protein-coding
unique_peak1-1028-10-0-3.35641534500877-3.31132995230379	chr11	76007996	76008495	+	0	NA	Intergenic	Intergenic	-7313	NM_027773	116972	Mm.188413	NM_027773		Fam57a	2310047D13Rik|4932415L08Rik|5430402E13Rik|5430420K21Rik|Wdt3	family with sequence similarity 57, member A	protein-coding
common_peak2-23741-30-29-0.262784813883354-0.465043498729215	chr15	97767934	97768800	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	-26293	NM_201359	380967	Mm.196630	NM_201359	ENSMUSG00000052369	Tmem106c	AI046681|BC046621|D15Ertd405e	transmembrane protein 106C	protein-coding
common_peak1-13575-18-27--0.494435770829252-0.528262014464654	chr2	12923966	12924741	+	0	NA	3' UTR (NM_008961, exon 5 of 5)	3' UTR (NM_008961, exon 5 of 5)	8138	NM_153155	227580	Mm.229322	NM_153155		C1ql3	1110065A22Rik|AI661623|C1ql|C1qtnf13|CTRP13|K100	C1q-like 3	protein-coding
common_peak2-27423-95-150--0.0904893943010645-0.348629867354518	chr3	88949705	88951567	+	0	NA	TTS (NM_001099779)	TTS (NM_001099779)	10091	NM_001099779	18770	Mm.383180	NM_013631	ENSMUSG00000041237	Pklr	Pk-1|Pk1|R-PK	pyruvate kinase liver and red blood cell	protein-coding
common_peak1-8717-21-19-0.247561170378873-0.427564438475253	chr11	101301687	101302479	+	0	NA	Intergenic	B3A|SINE|B2	-1476	NM_011289	19942	Mm.340658	NM_011289	ENSMUSG00000063316	Rpl27	-	ribosomal protein L27	protein-coding
unique_peak2-34610-7-9--0.522837264589173-1.05908390183068	chr14	74871531	74872005	+	0	NA	Intergenic	Lx2|LINE|L1	116434	NR_046059	74425	Mm.399498	NR_046059		4933402J15Rik	-	RIKEN cDNA 4933402J15 gene	ncRNA
unique_peak1-4112-9-1-2.18961340640422-2.31132995230379	chr2	81679860	81680378	+	0	NA	Intergenic	Intergenic	-213696	NM_175513	241514	Mm.119383	NM_175513	ENSMUSG00000070866	Zfp804a	C630007C17Rik|Znf804a	zinc finger protein 804A	protein-coding
unique_peak2-36339-5-8--0.874305337448166-1.10484139239135	chr2	91947855	91948441	+	0	NA	Intergenic	L1MC1|LINE|L1	-76191	NM_138755	192285	Mm.330408	NM_138755	ENSMUSG00000058318	Phf21a	80kDa|Bhc|Bhc80|D030065N23Rik|PFTF1	PHD finger protein 21A	protein-coding
common_peak1-10277-10-10--0.103016273628528-0.301029995663987	chr13	59453342	59453865	+	0	NA	Intergenic	L1MA6|LINE|L1	192209	NM_001284221	67269	Mm.153008	NM_023328	ENSMUSG00000021557	Agtpbp1	1700020N17Rik|2310001G17Rik|2900054O13Rik|4930445M19Rik|5730402G09Rik|CCP1|Nna1|nmf243|pcd	ATP/GTP binding protein 1	protein-coding
unique_peak2-33960-6-9--0.75652998450706-1.11707584880836	chr12	80324329	80324809	+	0	NA	TTS (NM_030017)	TTS (NM_030017)	14668	NM_030017	77974	Mm.274373	NM_030017	ENSMUSG00000021123	Rdh12	A930033N07Rik	retinol dehydrogenase 12	protein-coding
common_peak2-31613-25-21-0.402418286707809-0.580176690544129	chr8	122775328	122776161	+	0	NA	Intergenic	Intergenic	-23614	NR_110496	434353	Mm.411793	NR_110496		A330074K22Rik	-	RIKEN cDNA A330074K22 gene	ncRNA
common_peak1-10445-20-53--1.26681271757228-3.16860498301544	chr13	104228225	104229221	+	0	NA	Intergenic	MLT2D|LTR|ERVL	-104151	NM_175171	328329	Mm.202606	NM_175171	ENSMUSG00000034751	Mast4	4930420O11Rik|AI642422|mKIAA0303	microtubule associated serine/threonine kinase family member 4	protein-coding
unique_peak2-37666-4-6--0.830815435910851-0.989110657569874	chr5	92966666	92967044	+	0	NA	Intergenic	RMER16-int|LTR|ERVK	-32221	NM_007644	12492	Mm.297964	NM_007644	ENSMUSG00000029426	Scarb2	9330185J12Rik|Cd36l2|LGP85|LIMP-2|MLGP85	scavenger receptor class B, member 2	protein-coding
unique_peak2-36271-8-11--0.579740082773585-1.14218153353838	chr2	60382803	60383363	+	0	NA	intron (NM_008867, intron 1 of 29)	MLT1B|LTR|MaLR	8282	NM_008867	18779	Mm.5092	NM_008867	ENSMUSG00000054580	Pla2r1	Pla2-r|Pla2g1br|Pla2r	phospholipase A2 receptor 1	protein-coding
unique_peak1-2284-7-0-2.79909083029819-2.40823996531185	chr15	79417692	79418123	+	0	NA	intron (NM_010059, intron 8 of 13)	intron (NM_010059, intron 8 of 13)	17632	NR_103477	13404	Mm.2524	NM_010059	ENSMUSG00000022429	Dmc1	Dmc1h|Lim15|Mei11|sgdp	DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous recombination	protein-coding
common_peak2-19684-42-6-2.93497440580958-9.8919252452264	chr1	58651688	58652276	+	0	NA	intron (NM_025597, intron 2 of 2)	intron (NM_025597, intron 2 of 2)	8539	NM_025597	66495	Mm.2033	NM_025597		Ndufb3	2700033I16Rik|AI415450	NADH dehydrogenase (ubiquinone) 1 beta subcomplex 3	protein-coding
common_peak2-30135-21-14-0.662598669657717-0.879255460030357	chr6	140508234	140508976	+	0	NA	intron (NM_144920, intron 15 of 30)	intron (NM_144920, intron 15 of 30)	-62579	NM_178803	11569	Mm.86453	NM_009637	ENSMUSG00000030232	Aebp2	AU023766|B230313N05Rik	AE binding protein 2	protein-coding
unique_peak2-34105-2-9--2.23938235115068-1.87199725847353	chr13	15514387	15514967	+	0	NA	Intergenic	Intergenic	-40879	NM_008130	14634	Mm.5098	NM_008130	ENSMUSG00000021318	Gli3	AI854843|AU023367|Bph|GLI3-190|GLI3FL|Pdn|Xt|add	GLI-Kruppel family member GLI3	protein-coding
common_peak1-8049-33-36-0.121884196896579-0.346766333527252	chr1	172147490	172148791	+	0	NA	Intergenic	Intergenic	-2616	NM_010633	16589	Mm.209150	NM_010633		Uhmk1	4732477C12Rik|4930500M09Rik|AA673513|AI449218|AU021979|KIS|Kist|P-CIP2	U2AF homology motif (UHM) kinase 1	protein-coding
common_peak1-12270-10-33--1.73104749624157-3.11713623526324	chr17	43016612	43017155	+	0	NA	Intergenic	PB1D7|SINE|Alu	-3510	NM_009847	12488	Mm.218637	NM_009847	ENSMUSG00000061665	Cd2ap	AL024079|C78928|METS-1|Mets1	CD2-associated protein	protein-coding
common_peak2-26892-10-16--0.73104749624157-0.604422558181019	chr2	157457057	157457725	+	0	NA	Intergenic	PB1D9|SINE|Alu	-65294	NM_016916	53619	Mm.480461	NM_016916	ENSMUSG00000067787	Blcap	AI462828|Bc10	bladder cancer associated protein homolog (human)	protein-coding
common_peak2-28675-40-51--0.0414640353899935-0.301029995663982	chr5	32137981	32140008	+	0	NA	intron (NM_181281, intron 5 of 10)	MER102a|DNA|MER1_type	138571	NM_181282	107976	Mm.482126	NM_144541	ENSMUSG00000052139	Bre	6030405P19Rik|AI429776|B830038C02Rik	brain and reproductive organ-expressed protein	protein-coding
common_peak2-30471-43-43-0.323131566886405-0.62090566497527	chr7	47042151	47043900	+	0	NA	Intergenic	Intergenic	269889	NM_001004139	70227	Mm.333800	NM_001004139	ENSMUSG00000068959	Zfp619	3000002G13Rik	zinc finger protein 619	protein-coding
common_peak1-18608-24-31--0.206790097232283-0.334168439396943	chr8	107133358	107134243	+	0	NA	intron (NM_001252628, intron 17 of 17)	ID_B1|SINE|B4	14496	NM_007663	12556	Mm.19423	NM_007663	ENSMUSG00000031881	Cdh16	-	cadherin 16	protein-coding
common_peak1-16671-232-192-1.10725114838793-18.6505526133481	chr6	4600078	4602128	+	0	NA	Intergenic	L1Md_F2|LINE|L1	50037	NM_145398	213819	Mm.270703	NM_145398	ENSMUSG00000015189	Casd1	Cas1|Cast1	CAS1 domain containing 1	protein-coding
common_peak1-11670-49-43-0.546852204387887-1.20183724428354	chr16	25425036	25426572	+	0	NA	Intergenic	Intergenic	138901	NM_175165	71338	Mm.126851	NM_175165	ENSMUSG00000048399	Tprg	5430420C16Rik|Tprg1	transformation related protein 63 regulated	protein-coding
common_peak1-18047-16-9-0.796335547380699-0.844317084070804	chr7	144775979	144776800	+	0	NA	Intergenic	ORR1B2|LTR|MaLR	147032	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
common_peak1-8343-41-62--0.276131218651257-0.491755066901284	chr10	50591888	50593276	+	0	NA	Intergenic	Intergenic	-22875	NM_011376	20464	Mm.4774	NM_011376	ENSMUSG00000019913	Sim1	bHLHe14|mSIM1	single-minded homolog 1 (Drosophila)	protein-coding
common_peak1-11727-69-37-1.34721493381515-6.34732844805782	chr16	33055891	33057308	+	0	NA	promoter-TSS (NM_001130484)	promoter-TSS (NM_001130484)	-1	NM_021338	57808	Mm.19355	NM_021338	ENSMUSG00000060636	Rpl35a	2810431L15Rik|Rpl35	ribosomal protein L35A	protein-coding
unique_peak1-1557-7-4-0.477162735410827-1.09384600808989	chr13	28545181	28545696	+	0	NA	Intergenic	Intergenic	257304	NR_105787	102466635		NR_105787	miRBase:MI0021897	Mir6368	mmu-mir-6368	microRNA mir-6368	ncRNA
common_peak1-13088-18-17-0.142994149786039-0.353907621462753	chr19	7039132	7039932	+	0	NA	intron (NM_008874, intron 8 of 30)	intron (NM_008874, intron 8 of 30)	4772	NM_008874	18797	Mm.273204	NM_008874	ENSMUSG00000024960	Plcb3	mKIAA4098	phospholipase C, beta 3	protein-coding
common_peak2-22308-14-9-0.577288065470282-0.630231561310125	chr13	20182054	20182556	+	0	NA	promoter-TSS (NM_080288)	promoter-TSS (NM_080288)	-71	NM_080288	140580	Mm.342392	NM_080288	ENSMUSG00000041112	Elmo1	6330578D22Rik|C230095H21Rik|CED-12	engulfment and cell motility 1	protein-coding
unique_peak2-33943-4-6--0.830815435910851-0.989110657569874	chr12	75668965	75669398	+	0	NA	Intergenic	IAP-d-int|LTR|ERVK	270720	NM_198866	386753	Mm.341686	NM_198866	ENSMUSG00000029878	Dbpht2	Spot2	DNA binding protein with his-thr domain	protein-coding
common_peak2-30757-70-80-0.280116913490774-0.696963190089503	chr7	121033822	121035497	+	0	NA	intron (NM_145584, intron 5 of 15)	intron (NM_145584, intron 5 of 15)	125147	NM_145584	233744	Mm.334160	NM_145584	ENSMUSG00000038156	Spon1	AI666765|AW455831|BC020531|D330035F22Rik|FSP	spondin 1, (f-spondin) extracellular matrix protein	protein-coding
common_peak2-25383-8-9--0.316705676939792-1.03275496310833	chr18	85305244	85305623	+	0	NA	Intergenic	Intergenic	-184517	NM_025969	67105	Mm.250617	NM_025969	ENSMUSG00000024645	Timm21	1700034H14Rik|2700002I20Rik	tranlocase of inner mitochondrial membrane 21	protein-coding
common_peak1-11122-21-10-1.11005764662894-1.59083646988122	chr15	64222003	64222907	+	0	NA	Intergenic	Intergenic	-7974	NM_010026	13196	Mm.277236	NM_010026	ENSMUSG00000022377	Asap1	AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19	ArfGAP with SH3 domain, ankyrin repeat and PH domain1	protein-coding
common_peak2-26296-20-22--0.03548717146582-0.301029995663994	chr2	32137398	32138007	+	0	NA	intron (NM_175190, intron 2 of 4)	intron (NM_175190, intron 2 of 4)	5887	NR_110965	72931	Mm.27344	NM_175190	ENSMUSG00000044627	Swi5	1500019F05Rik|2900010J23Rik|AI046671	SWI5 recombination repair homolog (yeast)	protein-coding
common_peak2-29604-12-21--0.810655633549659-0.713635438203849	chr6	52639587	52640319	+	0	NA	Intergenic	B3|SINE|B2	-23770	NM_025816	52440	Mm.389757	NM_025816	ENSMUSG00000004535	Tax1bp1	1200003J11Rik|1700069J21Rik|AA930106|D6Ertd404e|D6Ertd772e|T6bp|TXBP151	Tax1 (human T cell leukemia virus type I) binding protein 1	protein-coding
common_peak1-13438-60-25-1.65385214347944-7.24841143165827	chr19	55461791	55463500	+	0	NA	intron (NM_001293685, intron 5 of 8)	intron (NM_001293685, intron 5 of 8)	72098	NM_001293686	53611	Mm.258637	NM_016862	ENSMUSG00000024983	Vti1a	1110014F16Rik|1110018K19Rik|4921537J05Rik|MVti1|MVti1a|Vti1|Vti1-rp2	vesicle transport through interaction with t-SNAREs 1A	protein-coding
common_peak1-11359-27-33--0.0959168903551033-0.304370854244436	chr15	89373335	89374269	+	0	NA	intron (NM_021423, intron 19 of 21)	intron (NM_021423, intron 19 of 21)	-24955	NM_013455	11434	Mm.57	NM_013455	ENSMUSG00000022622	Acr	-	acrosin prepropeptide	protein-coding
common_peak2-22059-36-60--0.451416251395132-0.767941280947577	chr12	70967803	70969022	+	0	NA	intron (NM_201519, intron 2 of 30)	MTD|LTR|MaLR	23739	NR_038172	70934	Mm.440427	NR_038172		4931403G20Rik	-	RIKEN cDNA 4931403G20 gene	ncRNA
common_peak1-8292-16-22--0.405298313788951-0.440610794044987	chr10	31445326	31446003	+	0	NA	intron (NM_001013411, intron 5 of 6)	L1Md_F2|LINE|L1	-116133	NM_001146349	268291	Mm.295212	NM_001146349	ENSMUSG00000063760	Rnf217	AU016819|Ibrdc1	ring finger protein 217	protein-coding
common_peak1-11311-13-6-0.971117108580164-1.01572999746118	chr15	84720428	84721096	+	0	NA	Intergenic	ORR1A2|LTR|MaLR	-33096	NM_016714	18141	Mm.28379	NM_016714	ENSMUSG00000016619	Nup50	1700030K07Rik|AI413123|Npap60	nucleoporin 50	protein-coding
common_peak1-15871-60-135--0.733170979629808-3.14057145190753	chr5	5419537	5421297	+	0	NA	Intergenic	Intergenic	-40166	NM_011074	18647	Mm.389061	NM_011074	ENSMUSG00000028926	Cdk14	Pftk1|mKIAA0834	cyclin-dependent kinase 14	protein-coding
common_peak2-32146-15-19--0.309763344331706-0.356936432242222	chr9	108144666	108145374	+	0	NA	intron (NM_001276485, intron 1 of 2)	intron (NM_001276485, intron 1 of 2)	21126	NM_010017	13138	Mm.7524	NM_010017		Dag1	D9Wsu13e|DG|Dp427|Dp71	dystroglycan 1	protein-coding
common_peak1-10077-15-29--0.894725845052863-1.1282783422172	chr13	23550832	23551640	+	0	NA	exon (NM_013483, exon 8 of 8)	exon (NM_013483, exon 8 of 8)	6534	NM_013483	12231	Mm.1420	NM_013483	ENSMUSG00000000706	Btn1a1	Btn	butyrophilin, subfamily 1, member A1	protein-coding
unique_peak2-35294-4-9--1.34538860874061-1.36011389749466	chr17	8367980	8368435	+	0	NA	intron (NM_201230, intron 6 of 11)	intron (NM_201230, intron 6 of 11)	9824	NM_201230	75296	Mm.227250	NM_201230	ENSMUSG00000069135	Fgfr1op	4930553O10Rik|FOP	Fgfr1 oncogene partner	protein-coding
common_peak1-7695-39-16-1.52829840566881-4.11413917592912	chr1	82815962	82817631	+	0	NA	Intergenic	Intergenic	-19262	NM_010472	15463	Mm.392569	NM_010472	ENSMUSG00000026159	Agfg1	AU045498|C130049H11Rik|C85612|D730048C23Rik|Hrb|RAB|Rip	ArfGAP with FG repeats 1	protein-coding
unique_peak1-4215-10-2-1.77145284428761-2.09384600808989	chr2	120085206	120085736	+	0	NA	Intergenic	Intergenic	-14400	NM_177845	329502	Mm.330505	NM_177845	ENSMUSG00000050211	Pla2g4e	2310026J01Rik|C230096D22|Pla2epsilon	phospholipase A2, group IVE	protein-coding
unique_peak2-39114-1-6--2.43441193227435-1.56314192529759	chr8	82262522	82262834	+	0	NA	intron (NM_026904, intron 4 of 4)	intron (NM_026904, intron 4 of 4)	26959	NM_026904	68999	Mm.257445	NM_026904	ENSMUSG00000036977	Anapc10	1500026N15Rik|A830003M23Rik|APC10	anaphase promoting complex subunit 10	protein-coding
common_peak2-28137-10-6-0.549060422951165-1.21398586181642	chr4	98003609	98004076	+	0	NA	Intergenic	Intergenic	46114	NM_053157	94043	Mm.331719	NM_053157	ENSMUSG00000028563	Tm2d1	2310026L18Rik|AA990549|Bbp	TM2 domain containing 1	protein-coding
common_peak2-19718-14-30--1.05498015002923-1.40782320807776	chr1	66817125	66817669	+	0	NA	intron (NM_001122738, intron 5 of 14)	MTEb|LTR|MaLR	46772	NM_177645	68691	Mm.240912	NM_177645	ENSMUSG00000026004	Kansl1l	1110028C15Rik|1190030G24|AI427598|C430010P07Rik|mKIAA4189	KAT8 regulatory NSL complex subunit 1-like	protein-coding
unique_peak2-37714-6-9--0.75652998450706-1.11707584880836	chr5	104390500	104391175	+	0	NA	intron (NM_198030, intron 6 of 6)	Lx6|LINE|L1	15570	NM_198030	243168	Mm.284944	NM_198030	ENSMUSG00000034528	Hsd17b13	AI047820|PAN1B-like|Pan1b	hydroxysteroid (17-beta) dehydrogenase 13	protein-coding
unique_peak2-37528-1-4--1.94898510510411-1.10720996964787	chr5	24426914	24427329	+	0	NA	intron (NM_145401, intron 4 of 15)	intron (NM_145401, intron 4 of 15)	-12794	NM_001170556	108099	Mm.33649	NM_145401	ENSMUSG00000028944	Prkag2	2410051C13Rik|AAKG|AAKG2|AI854673|H91620p|WPWS	protein kinase, AMP-activated, gamma 2 non-catalytic subunit	protein-coding
common_peak2-19848-8-9--0.316705676939792-1.03275496310833	chr1	91069453	91070004	+	0	NA	Intergenic	Intergenic	20399	NR_106129	102465771		NR_106129		Mir7669	mmu-mir-7669	microRNA mir-7669	ncRNA
common_peak1-13112-29-17-0.942365079172799-1.68242911687175	chr19	8871449	8872451	+	0	NA	intron (NM_026329, intron 2 of 7)	intron (NM_026329, intron 2 of 7)	1097	NM_026329	67710	Mm.22117	NM_026329	ENSMUSG00000071662	Polr2g	2410046K11Rik|A230108L04Rik|C76415|RBP7|Rpo2-7l	polymerase (RNA) II (DNA directed) polypeptide G	protein-coding
common_peak1-17705-36-24-0.83546489639303-1.71114535657705	chr7	78782639	78783706	+	0	NA	Intergenic	Intergenic	668309	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding
common_peak2-25476-17-21--0.24113528043226-0.322753776620787	chr19	4625763	4626398	+	0	NA	promoter-TSS (NM_023131)	promoter-TSS (NM_023131)	-463	NM_023131	19671	Mm.391143	NM_023131	ENSMUSG00000024889	Rce1	D19Ertd283e|D19Ertd98e	RCE1 homolog, prenyl protein peptidase (S. cerevisiae)	protein-coding
common_peak2-25282-23-21-0.262335885871783-0.416752705545949	chr18	69344003	69344642	+	0	NA	Intergenic	Intergenic	-159824	NM_013685	21413	Mm.4269	NM_013685	ENSMUSG00000053477	Tcf4	5730422P05Rik|ASP-I2|E2-2|E2.2|ITF-2|ITF-2b|ITF2|ME2|MITF-2A|MITF-2B|SEF-2|SEF2|SEF2-1|TFE|Tcf-4|bHLHb19	transcription factor 4	protein-coding
unique_peak1-2510-10-7-0.356415345008769-1.12966497611638	chr16	15992117	15992648	+	0	NA	intron (NM_146068, intron 8 of 19)	intron (NM_146068, intron 8 of 19)	105003	NM_007679	12609	Mm.347407	NM_007679		Cebpd	-	CCAAT/enhancer binding protein (C/EBP), delta	protein-coding
unique_peak2-37064-1-10--3.08648862885404-2.57096726280955	chr3	142826961	142827311	+	0	NA	Intergenic	Intergenic	-78883	NR_040551	320072	Mm.136397	NR_040551		A830019L24Rik	-	RIKEN cDNA A830019L24 gene	ncRNA
common_peak2-32245-13-13--0.0288828914198356-0.309074325783021	chrX	107150777	107151369	+	0	NA	Intergenic	L1_Mus2|LINE|L1	-417019	NR_033597	634340	Mm.66709	NR_033597	ENSMUSG00000082853	Gm7134	EG634340	kinesin family member 18B pseudogene	pseudo
common_peak1-15797-42-49-0.0984731380924595-0.353756356258769	chr4	155992409	155993897	+	0	NA	Intergenic	Intergenic	-384187	NM_198305	231003	Mm.423038	NM_198305	ENSMUSG00000078484	Klhl17	AL022703|BC058738	kelch-like 17	protein-coding
common_peak2-26475-13-6-0.971117108580164-1.01572999746118	chr2	78060320	78060681	+	0	NA	Intergenic	Intergenic	-17204	NM_177843	329436	Mm.235448	NM_177843		Gm14461	A830093M07|OTTMUSG00000016703	predicted gene 14461	protein-coding
common_peak2-23998-8-6-0.197867495889966-1.03789460276074	chr16	20371133	20371511	+	0	NA	intron (NM_013790, intron 17 of 29)	intron (NM_013790, intron 17 of 29)	-45845	NM_183158	224044	Mm.276400	NM_183158	ENSMUSG00000022818	Cyp2ab1	EG224044|F730023N20	cytochrome P450, family 2, subfamily ab, polypeptide 1	protein-coding
common_peak2-31493-23-21-0.262335885871783-0.416752705545949	chr8	106641360	106642261	+	0	NA	intron (NM_009868, intron 2 of 11)	ORR1E|LTR|MaLR	16285	NM_009868	12562	Mm.21767	NM_009868	ENSMUSG00000031871	Cdh5	7B4|AA408225|Cd144|VE-Cad|VECD|VEcad|Vec	cadherin 5	protein-coding
common_peak1-10057-27-37--0.256381562548349-0.379775532323854	chr13	21402130	21402888	+	0	NA	Intergenic	L1Md_T|LINE|L1	-1563	NM_145451	75512	Mm.46195	NM_145451	ENSMUSG00000004341	Gpx6	1700020G18Rik|Ry2d1|olfactory	glutathione peroxidase 6	protein-coding
unique_peak2-36672-1-7--2.62705701021674-1.80617997398389	chr3	30514883	30515310	+	0	NA	intron (NM_030557, intron 7 of 7)	intron (NM_030557, intron 7 of 7)	14087	NM_001289621	80732	Mm.200378	NM_030557	ENSMUSG00000037730	Mynn	2810011C24Rik|AA415053|AI661031|AW049392|Mynr|SBBIZ1	myoneurin	protein-coding
unique_peak2-37162-8-10--0.454209200689727-1.078512453669	chr4	43578655	43579204	+	0	NA	TTS (NM_172692)	TTS (NM_172692)	3423	NM_013497	12913	Mm.12407	NM_013497	ENSMUSG00000028466	Creb3	AU044960|AW538053|C80076|LZIP|LZIP-1|LZIP-2|Luman	cAMP responsive element binding protein 3	protein-coding
common_peak1-9497-65-86-0.0492224436283992-0.320772353720356	chr11	109650737	109652126	+	0	NA	intron (NM_001162428, intron 5 of 5)	RMER5|LTR|ERV1	37929	NM_027038	69324	Mm.31700	NM_027038	ENSMUSG00000020617	1700012B07Rik	1700069D21Rik	RIKEN cDNA 1700012B07 gene	protein-coding
common_peak2-32199-9-12--0.510826311736872-0.394412252720706	chr9	119981111	119981731	+	0	NA	Intergenic	Intergenic	-4007	NM_009987	13051	Mm.44065	NM_009987	ENSMUSG00000052336	Cx3cr1	-	chemokine (C-X3-C motif) receptor 1	protein-coding
common_peak2-24971-53-73--0.0684803532130216-0.307062057408912	chr18	6240605	6241773	+	0	NA	5' UTR (NM_008448, exon 1 of 26)	5' UTR (NM_008448, exon 1 of 26)	333	NM_008448	16573	Mm.223744	NM_008448	ENSMUSG00000006740	Kif5b	AL022807|Khc|Khcs|Kns1|Ukhc	kinesin family member 5B	protein-coding
common_peak2-28743-8-12--0.695217300193522-0.475924844171029	chr5	36724088	36724561	+	0	NA	intron (NM_030889, intron 1 of 26)	MLT1K|LTR|MaLR	16464	NM_030889	81840	Mm.34113	NM_030889	ENSMUSG00000029093	Sorcs2	N28137|mKIAA1329	sortilin-related VPS10 domain containing receptor 2	protein-coding
unique_peak1-3222-20-5-1.90311228387004-2.81016724606745	chr18	60632630	60633539	+	0	NA	TTS (NM_134133)	TTS (NM_134133)	28553	NM_134133	106878	Mm.273197	NM_134133	ENSMUSG00000038059	Smim3	2010002N04Rik|AI195350|AW561905|Nid67|cI-41	small integral membrane protein 3	protein-coding
common_peak1-17063-8-5-0.420259917226415-1.10484139239135	chr6	99914705	99915231	+	0	NA	Intergenic	Intergenic	-238582	NM_001170419	50501	Mm.87365	NM_015768	ENSMUSG00000030069	Prok2	Bv8|PK2|Prok1	prokineticin 2	protein-coding
unique_peak1-154-9-0-3.18961340640422-3.01029995663981	chr1	72898217	72898732	+	0	NA	intron (NM_008342, intron 3 of 3)	intron (NM_008342, intron 3 of 3)	22965	NM_010518	16011	Mm.405761	NM_010518	ENSMUSG00000026185	Igfbp5	AI256729|AW208790|IGFBP-5|IGFBP-5P	insulin-like growth factor binding protein 5	protein-coding
common_peak1-9488-86-116-0.105271074448948-0.39078581421855	chr11	107130911	107132645	+	0	NA	intron (NM_145823, intron 5 of 9)	L1MC4|LINE|L1	-81083	NM_001161329	68979	Mm.294617	NM_133702	ENSMUSG00000018433	Nol11	1500002M01Rik|AU015220|AU019874	nucleolar protein 11	protein-coding
common_peak1-9713-15-25--0.688274967585436-0.73354163167379	chr12	29964516	29965221	+	0	NA	Intergenic	Intergenic	-248381	NM_001093775	17933	Mm.253067	NM_008666	ENSMUSG00000061911	Myt1l	2900046C06Rik|2900093J19Rik|C630034G21Rik|Nztf1|Pmng1|Png-1|mKIAA1106	myelin transcription factor 1-like	protein-coding
unique_peak2-36618-0-6--3.64748585253182-1.56314192529759	chr3	37961459	37961852	+	0	NA	Intergenic	MYSERV-int|LTR|ERVK	145386	NR_040541	71342	Mm.410782	NR_040541		5430434I15Rik	-	RIKEN cDNA 5430434I15 gene	ncRNA
common_peak2-21021-13-9-0.456543935750406-0.53895475198017	chr11	31157251	31157866	+	0	NA	Intergenic	L1_Mus3|LINE|L1	112503	NM_011491	20856	Mm.32506	NM_011491		Stc2	AW125853|Stc2l|mustc2	stanniocalcin 2	protein-coding
unique_peak2-37725-2-6--1.72480917832092-1.26211192963361	chr5	105873576	105873992	+	0	NA	intron (NM_001033550, intron 1 of 4)	intron (NM_001033550, intron 1 of 4)	28990	NM_001033550	433926	Mm.439781	NM_001033550	ENSMUSG00000070639	Lrrc8b	R75581|Ta-lrrp|mKIAA0231	leucine rich repeat containing 8 family, member B	protein-coding
common_peak2-21178-24-24-0.149353712992992-0.367910579842133	chr11	59847754	59848638	+	0	NA	intron (NM_001290012, intron 1 of 6)	intron (NM_001290012, intron 1 of 6)	2311	NM_008819	18618	Mm.2731	NM_008819	ENSMUSG00000000301	Pemt	PEAMT|PEMT2|Pempt|Pempt2	phosphatidylethanolamine N-methyltransferase	protein-coding
unique_peak1-449-8-0-3.00522241794757-2.70926996097583	chr1	166253960	166254537	+	0	NA	intron (NM_138314, intron 3 of 13)	GA-rich|Low_complexity|Low_complexity	16445	NM_178071	171567	Mm.219428	NM_138314		Nme7	D530024H21Rik|Nm23-M7|Nm23-r7	NME/NM23 family member 7	protein-coding
common_peak2-31846-67-91-0.0208495267259821-0.3057506808173	chr9	45954113	45955468	+	0	NA	intron (NM_027498, intron 3 of 24)	MTE2b-int|LTR|MaLR	-81923	NM_009692	11806	Mm.26743	NM_009692	ENSMUSG00000032083	Apoa1	Alp-1|Apoa-1|Brp-14|Ltw-1|Lvtw-1|Sep-1|Sep-2|Sep2|apo-AI|apoA-I	apolipoprotein A-I	protein-coding
unique_peak1-7354-8-2-1.42025991722641-1.65811743852845	chrX	16565213	16565750	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	-76591	NM_010883	17986	Mm.5014	NM_010883	ENSMUSG00000040138	Ndp	ND|Ndph	Norrie disease (pseudoglioma) (human)	protein-coding
unique_peak2-38035-7-5-0.214128329577033-1.01466476204226	chr6	38253822	38254224	+	0	NA	Intergenic	RMER4A|LTR|ERVK	-4764	NM_172467	209032	Mm.101389	NM_172467	ENSMUSG00000047749	Zc3hav1l	B130055L09Rik|E430016P22Rik	zinc finger CCCH-type, antiviral 1-like	protein-coding
unique_peak2-38174-5-12--1.40482005414695-1.62698961692433	chr6	90715921	90716516	+	0	NA	intron (NM_001134384, intron 1 of 13)	(TCCA)n|Simple_repeat|Simple_repeat	43899	NM_001134384	232227	Mm.196943	NM_182784	ENSMUSG00000034312	Iqsec1	AW561907|BC026481|BRAG2|D6Ertd349e|cI-43	IQ motif and Sec7 domain 1	protein-coding
common_peak1-15992-26-46--0.626689759519175-1.0379745517287	chr5	33017916	33018752	+	0	NA	Intergenic	Intergenic	104790	NM_009535	22612	Mm.4558	NM_009535	ENSMUSG00000014932	Yes1	Yes|p61-Yes	Yamaguchi sarcoma viral (v-yes) oncogene homolog 1	protein-coding
common_peak2-22804-13-24--0.865384159136956-0.879255460030357	chr14	13623148	13623877	+	0	NA	intron (NM_012061, intron 1 of 28)	MIRm|SINE|MIR	32081	NM_001042617	27062	Mm.260881	NM_012061	ENSMUSG00000054423	Cadps	AU067781|CAPS|CAPS1|mKIAA1121	Ca2+-dependent secretion activator	protein-coding
common_peak1-14077-11-20--0.883623838527147-0.876666802405043	chr2	121171068	121171620	+	0	NA	intron (NM_178795, intron 9 of 29)	B4A|SINE|B4	5405	NM_178795	327655	Mm.386076	NM_178795	ENSMUSG00000033526	Ppip5k1	B430315C20Rik|Hisppd2a|mKIAA0377	diphosphoinositol pentakisphosphate kinase 1	protein-coding
common_peak1-19406-11-4-1.18676548936425-1.68134727924692	chrX	73464620	73465297	+	0	NA	Intergenic	L1Md_A|LINE|L1	-44687	NM_001013760	238829	Mm.292319	NM_001013760	ENSMUSG00000071738	Gm4937	EG238829	predicted gene 4937	protein-coding
common_peak2-26176-34-39-0.0601404321139034-0.325162986021101	chr2	22895043	22896237	+	0	NA	5' UTR (NM_001077193, exon 1 of 8)	5' UTR (NM_001077193, exon 1 of 8)	121	NM_001077192	11308	Mm.205647	NM_007380	ENSMUSG00000058835	Abi1	E3B1|NAP1|Ssh3bp1	abl-interactor 1	protein-coding
common_peak1-18765-9-6-0.382258484346616-1.11707584880836	chr8	126825480	126825919	+	0	NA	intron (NM_139272, intron 2 of 15)	intron (NM_139272, intron 2 of 15)	70405	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
unique_peak2-33473-9-11--0.395349094316936-0.344532117358383	chr11	69335017	69335521	+	0	NA	intron (NM_001081330, intron 5 of 85)	intron (NM_001081330, intron 5 of 85)	27341	NM_001081330	327954	Mm.247478	NM_177617	ENSMUSG00000005237	Dnah2	2900022L05Rik|4930564A01|D130094J20|D330014H01Rik|Dnahc2|Dnhd3	dynein, axonemal, heavy chain 2	protein-coding
unique_peak1-4418-10-1-2.35641534500877-2.57096726280955	chr2	167785154	167785723	+	0	NA	intron (NM_011201, intron 1 of 8)	ID_B1|SINE|B4	27611	NM_011201	19246	Mm.277916	NM_011201	ENSMUSG00000027540	Ptpn1	PTP-1B|PTP-HA2|PTP1B	protein tyrosine phosphatase, non-receptor type 1	protein-coding
common_peak2-27884-11-7-0.508693584251613-1.21681515183528	chr4	125124269	125124702	+	0	NA	Intergenic	B4A|SINE|B4	-43590	NM_001081097	14807	Mm.40896	NM_001081097	ENSMUSG00000001985	Grik3	9630027E11|GluK3|GluR7-3|Glur-7|Glur7	glutamate receptor, ionotropic, kainate 3	protein-coding
unique_peak1-5423-8-3-1.00522241794757-1.39487600375387	chr5	113208052	113208520	+	0	NA	intron (NM_028901, intron 33 of 43)	intron (NM_028901, intron 33 of 43)	-14026	NR_040675	67360	Mm.59218	NR_040675	ENSMUSG00000098230	1700095B10Rik	-	RIKEN cDNA 1700095B10 gene	ncRNA
common_peak1-13760-9-22--1.33394854965279-1.52222891542741	chr2	34772118	34772562	+	0	NA	Intergenic	ORR1A4-int|LTR|MaLR	-2844	NM_028716	74016	Mm.65691	NM_028716	ENSMUSG00000026873	Phf19	3110009G19Rik|3321402G02Rik	PHD finger protein 19	protein-coding
unique_peak1-1271-10-2-1.77145284428761-2.09384600808989	chr11	117827423	117827969	+	0	NA	3' UTR (NM_007707, exon 2 of 2)	3' UTR (NM_007707, exon 2 of 2)	2984	NM_007707	12702	Mm.3468	NM_007707	ENSMUSG00000053113	Socs3	Cis3|Cish3|EF-10|Ef10|SSI-3|Ssi3	suppressor of cytokine signaling 3	protein-coding
common_peak2-32275-142-168-0.444442824288435-2.40686719859219	chrX	13279723	13282198	+	0	NA	intron (NM_001284503, intron 3 of 26)	(CA)n|Simple_repeat|Simple_repeat	42471	NM_175669	319200	Mm.383294	NM_175669	ENSMUSG00000047678	Gpr82	-	G protein-coupled receptor 82	protein-coding
common_peak1-16357-67-83-0.152094060004234-0.424475579964465	chr5	121710937	121712976	+	0	NA	intron (NM_181421, intron 4 of 75)	intron (NM_181421, intron 4 of 75)	41728	NM_181421	269700	Mm.184589	NM_181421	ENSMUSG00000042744	Gm15800	A130010L24|AU042671|BC019639|EG545802|OTTMUSG00000026283|mKIAA0614	predicted gene 15800	protein-coding
unique_peak2-35622-4-15--2.02346051385325-2.4322161449009	chr17	87025477	87025957	+	0	NA	intron (NM_011104, intron 13 of 14)	ID_B1|SINE|B4	-127487	NM_010137	13819	Mm.1415	NM_010137	ENSMUSG00000024140	Epas1	HIF-2alpha|HIF2A|HLF|HRF|MOP2|bHLHe73	endothelial PAS domain protein 1	protein-coding
common_peak2-31949-24-47--0.791752597953439-1.35770911664594	chr9	65032411	65033294	+	0	NA	intron (NM_008988, intron 13 of 13)	intron (NM_008988, intron 13 of 13)	-29645	NM_177460	214424	Mm.31129	NM_177460	ENSMUSG00000032392	Parp16	ARTD15|BC055447|C79952|PARP-16	poly (ADP-ribose) polymerase family, member 16	protein-coding
common_peak1-16033-22-35--0.522640896354908-0.664636481544818	chr5	36465110	36466038	+	0	NA	intron (NM_030889, intron 3 of 26)	B4A|SINE|B4	-81096	NM_175249	76943	Mm.44242	NM_175249	ENSMUSG00000043430	Psapl1	2310020A21Rik	prosaposin-like 1	protein-coding
common_peak1-11092-86-134--0.101179803018478-0.354490061583565	chr15	59646673	59649597	+	0	NA	Intergenic	Intergenic	-21621	NR_045076	100503021	Mm.402924	NR_045076		Gm19510	-	predicted gene, 19510	ncRNA
common_peak2-24163-13-25--0.921967687503323-0.983972868822056	chr16	44724119	44724868	+	0	NA	promoter-TSS (NM_145972)	promoter-TSS (NM_145972)	79	NM_145972	212547	Mm.310573	NM_145972	ENSMUSG00000036208	BC027231	Nepro	cDNA sequence BC027231	protein-coding
unique_peak1-2589-8-1-2.00522241794757-2.05605744720049	chr16	31363952	31364463	+	0	NA	Intergenic	Intergenic	-49313	NM_001301354	11815	Mm.2082	NM_007470	ENSMUSG00000022548	Apod	-	apolipoprotein D	protein-coding
common_peak1-13396-16-7-1.11826364226806-1.23399803405144	chr19	47090814	47091447	+	0	NA	intron (NM_146100, intron 1 of 2)	intron (NM_146100, intron 1 of 2)	-1451	NM_001164363	76952	Mm.40965	NM_029810	ENSMUSG00000025041	Nt5c2	2010002I23Rik|CnII|ENSMUSG00000025039|Gm9751|Gmp|Nt5b|Pnt5|cN-II	5'-nucleotidase, cytosolic II	protein-coding
common_peak1-13412-11-9-0.186765489364251-0.344532117358383	chr19	53142043	53142518	+	0	NA	Intergenic	MER53|DNA|hAT	-8462	NR_045320	78457	Mm.76932	NR_045320		1700054A03Rik	-	RIKEN cDNA 1700054A03 gene	ncRNA
common_peak2-31004-12-16--0.4386868561627-0.368541233333383	chr8	10662795	10663398	+	0	NA	Intergenic	Intergenic	219358	NR_040705	320014	Mm.403203	NR_040705		B930025P03Rik	-	RIKEN cDNA B930025P03 gene	ncRNA
common_peak1-19217-18-16-0.225456309978012-0.397739447719379	chr9	106353065	106353979	+	0	NA	intron (NM_029631, intron 2 of 3)	MIRb|SINE|MIR	2551	NM_029631	76491	Mm.335427	NM_029631	ENSMUSG00000042073	Abhd14b	1810013B01Rik	abhydrolase domain containing 14b	protein-coding
common_peak1-10401-23-10-1.26233588587178-1.90052685918624	chr13	97248887	97249841	+	0	NA	Intergenic	Intergenic	-8249	NM_001042714	271144	Mm.470057	NM_001042714	ENSMUSG00000047117	Ankdd1b	9330128J19Rik	ankyrin repeat and death domain containing 1B	protein-coding
common_peak2-26422-18-16-0.225456309978012-0.397739447719379	chr2	60877531	60878011	+	0	NA	Intergenic	L1Md_T|LINE|L1	-64563	NR_045335	100038493	Mm.388076	NR_045335	ENSMUSG00000075325	Gm13582	ENSMUSG00000075325|OTTMUSG00000012844	predicted gene 13582	ncRNA
common_peak1-10839-12-5-1.06381348436648-1.78669045979184	chr14	105802101	105802738	+	0	NA	Intergenic	Intergenic	-24357	NR_045859	71362	Mm.410781	NR_045859		5430440P10Rik	-	RIKEN cDNA 5430440P10 gene	ncRNA
unique_peak1-3097-9-3-1.18961340640422-1.57096726280955	chr18	25617025	25617547	+	0	NA	intron (NM_001033532, intron 10 of 10)	IAP-d-int|LTR|ERVK	289765	NM_001033532	225289	Mm.391081	NM_001033532	ENSMUSG00000033632	AW554918	4921538P22|AI461742|Kiaa1328|mKIAA1328	expressed sequence AW554918	protein-coding
unique_peak2-32785-6-14--1.34149248522822-1.01572999746118	chr1	180386915	180387496	+	0	NA	intron (NM_026626, intron 3 of 6)	intron (NM_026626, intron 3 of 6)	51193	NM_026626	68226	Mm.252132	NM_026626	ENSMUSG00000026495	Efcab2	1700073K01Rik|D830011E08Rik	EF-hand calcium binding domain 2	protein-coding
common_peak1-17062-80-109-0.0692160528446921-0.335932833736598	chr6	99521049	99523688	+	0	NA	Intergenic	Intergenic	94397	NM_025829	66892	Mm.32889	NM_025829	ENSMUSG00000093661	Eif4e3	1300018P11Rik|AI451927|eIF4E-3	eukaryotic translation initiation factor 4E member 3	protein-coding
common_peak2-25086-49-68--0.102240633752985-0.327354903130192	chr18	36319964	36321037	+	0	NA	intron (NM_001167891, intron 1 of 9)	intron (NM_001167891, intron 1 of 9)	36314	NM_001167891	100042150	Mm.380390	NM_001167891	ENSMUSG00000060275	Nrg2	Don1|NTAK	neuregulin 2	protein-coding
unique_peak2-39758-8-11--0.579740082773585-1.14218153353838	chrX	126762730	126763102	+	0	NA	intron (NM_172493, intron 23 of 26)	intron (NM_172493, intron 23 of 26)	478638	NM_172493	54004	Mm.10763	NM_017398	ENSMUSG00000034480	Diap2	Dia3|Diaph2|Drf2|E430022I22Rik	diaphanous homolog 2 (Drosophila)	protein-coding
common_peak1-10519-21-17-0.399564263823923-0.561823156887258	chr14	7954429	7955251	+	0	NA	intron (NM_001270812, intron 2 of 5).3	intron (NM_001270812, intron 2 of 5).3	-16869	NM_001024712	100042149	Mm.396155	NM_001024712	ENSMUSG00000092167	Gm3696	544988|ENSMUSG00000056940|Gm10014	predicted gene 3696	protein-coding
common_peak2-23956-24-57--1.06477109235986-2.49326259230166	chr16	15593816	15594894	+	0	NA	intron (NM_023585, intron 1 of 3)	CpG	256	NM_001159351	70620	Mm.235407	NM_023585		Ube2v2	1110021H13Rik|4632410D19Rik|5730524P06Rik|6820402M05|AI848315|C81524|MMS2	ubiquitin-conjugating enzyme E2 variant 2	protein-coding
common_peak1-14623-13-14--0.12841856497075-0.301029995663977	chr3	53016832	53017473	+	0	NA	intron (NM_175386, intron 2 of 3)	LTR82A|LTR|ERVL	171683	NM_175386	108927	Mm.118617	NM_175386	ENSMUSG00000048332	Lhfp	2810489O06Rik|AI194968	lipoma HMGIC fusion partner	protein-coding
unique_peak2-33637-4-6--0.830815435910851-0.989110657569874	chr11	98587406	98587759	+	0	NA	intron (NM_011869, intron 3 of 25)	intron (NM_011869, intron 3 of 25)	3167	NM_011869	23989	Mm.246493	NM_011869	ENSMUSG00000017210	Med24	911GSE|AU040102|AW547152|D11Ertd307e|DRIP100|Gse2|Pparb2|Pparbp2|R75526|Thrap4|Trap100	mediator complex subunit 24	protein-coding
common_peak2-23968-107-138-0.235105859949888-0.787696916319932	chr16	17200751	17201667	+	0	NA	intron (NM_009456, intron 1 of 3)	CpG	376	NM_009456	22195	Mm.3074	NM_009456	ENSMUSG00000038965	Ube2l3	C79827|UbcM4|Ubce7	ubiquitin-conjugating enzyme E2L 3	protein-coding
unique_peak1-5100-8-1-2.00522241794757-2.05605744720049	chr4	150685891	150686371	+	0	NA	intron (NM_001081557, intron 5 of 23)	intron (NM_001081557, intron 5 of 23)	-254069	NM_009498	22319	Mm.273930	NM_009498	ENSMUSG00000028955	Vamp3	D130027G05Rik|VAMP-3|ceb	vesicle-associated membrane protein 3	protein-coding
common_peak1-8630-27-17-0.821620949452924-1.31432283146954	chr10	120616194	120617539	+	0	NA	Intergenic	Intergenic	131379	NM_029057	74694	Mm.233833	NM_029057	ENSMUSG00000052302	Tbc1d30	4930505D03Rik	TBC1 domain family, member 30	protein-coding
common_peak2-26001-6-8--0.60452689106201-1.03789460276074	chr19	55541301	55541682	+	0	NA	intron (NM_016862, intron 5 of 7)	Lx5|LINE|L1	150944	NM_001293686	53611	Mm.258637	NM_016862	ENSMUSG00000024983	Vti1a	1110014F16Rik|1110018K19Rik|4921537J05Rik|MVti1|MVti1a|Vti1|Vti1-rp2	vesicle transport through interaction with t-SNAREs 1A	protein-coding
unique_peak1-1700-13-5-1.19350952991661-1.95509489018123	chr13	90574932	90575521	+	0	NA	Intergenic	Lx4A|LINE|L1	345954	NM_025335	66074	Mm.241387	NM_025335		Tmem167	0610041E09Rik|5730424F14Rik|AU041184|AW537806|ENSMUSG00000060669|Gm10085|Tmem167a	transmembrane protein 167	protein-coding
common_peak2-22244-18-26--0.441968350935117-0.471456499375593	chr13	54574848	54575909	+	0	NA	Intergenic	RLTR31_Mur|LTR|ERVK	-5177	NM_028597	73666	Mm.292487	NM_028597	ENSMUSG00000025872	Thoc3	2410044K02Rik|AL033344	THO complex 3	protein-coding
common_peak1-10888-134-92-1.20541069767139-11.1624797779967	chr15	85655265	85659145	+	0	NA	Intergenic	Intergenic	-5042	NM_011105	18766	Mm.89965	NM_011105	ENSMUSG00000052496	Pkdrej	-	polycystic kidney disease (polycystin) and REJ (sperm receptor for egg jelly homolog, sea urchin)	protein-coding
unique_peak2-39554-2-5--1.50241675698448-1.08602067057793	chr9	70224069	70224574	+	0	NA	exon (NM_181072, exon 23 of 28)	exon (NM_181072, exon 23 of 28)	29239	NR_049200	100885839		NR_049200	miRBase:MI0019195	Mir5626	mmu-mir-5626	microRNA mir-5626	ncRNA
common_peak1-9056-7-7--0.200909169701811-0.97990265578305	chr11	68447255	68447778	+	0	NA	Intergenic	Intergenic	46977	NM_177779	276920	Mm.123046	NM_177779	ENSMUSG00000045915	Ccdc42	A530001H01Rik	coiled-coil domain containing 42	protein-coding
common_peak1-14073-14-12-0.198776442216552-0.373562084705529	chr2	120981041	120981770	+	0	NA	3' UTR (NM_001290811, exon 10 of 10)	3' UTR (NM_001290811, exon 10 of 10)	13576	NM_029475	75894	Mm.384805	NM_029475	ENSMUSG00000027259	Adal	4930578F03Rik	adenosine deaminase-like	protein-coding
common_peak2-21366-15-15-0.0121647505556561-0.30803596071496	chr11	78188285	78189074	+	0	NA	intron (NM_008238, intron 1 of 8)	intron (NM_008238, intron 1 of 8)	11431	NM_008238	15218	Mm.4496	NM_008238	ENSMUSG00000002057	Foxn1	D11Bhm185e|Fkh19|HFH-11|Hfh11|Whn|nu|nude	forkhead box N1	protein-coding
common_peak2-21069-13-20--0.613845392140992-0.532159081577619	chr11	49046171	49046749	+	0	NA	Intergenic	Intergenic	-11233	NM_010794	17308	Mm.196933	NM_010794	ENSMUSG00000020346	Mgat1	Mgat-1	mannoside acetylglucosaminyltransferase 1	protein-coding
common_peak2-28979-55-72-0.0147953122726845-0.30697942122102	chr5	105415019	105416431	+	0	NA	Intergenic	Intergenic	-3989	NM_030239	27405	Mm.389663	NM_030239	ENSMUSG00000029299	Abcg3	Abcp2|Mxr2	ATP-binding cassette, sub-family G (WHITE), member 3	protein-coding
common_peak1-15144-11-4-1.18676548936425-1.68134727924692	chr3	144993228	144993745	+	0	NA	intron (NM_027770, intron 7 of 59)	intron (NM_027770, intron 7 of 59)	38050	NM_027770	71355	Mm.235570	NM_027770	ENSMUSG00000028197	Col24a1	5430404K19Rik	collagen, type XXIV, alpha 1	protein-coding
common_peak1-18402-56-107--0.519291676724225-1.52915555991989	chr8	71922285	71923596	+	0	NA	Intergenic	Intergenic	-3497	NR_038043	378466	Mm.37846	NM_194351		Gm10033	9330175B10Rik|ENSMUSG00000057924|ENSMUSG00000071083|Gm10311	predicted gene 10033	ncRNA
unique_peak1-6925-8-7-0.00522241794757061-1.00793137938329	chr8	106618342	106618854	+	0	NA	Intergenic	B4A|SINE|B4	-6927	NM_009868	12562	Mm.21767	NM_009868	ENSMUSG00000031871	Cdh5	7B4|AA408225|Cd144|VE-Cad|VECD|VEcad|Vec	cadherin 5	protein-coding
common_peak1-10384-78-155--0.478581124701714-1.81136380906086	chr13	95324491	95326299	+	0	NA	intron (NM_009680, intron 26 of 26)	MERVL-int|LTR|ERVL	196480	NM_009680	11774	Mm.21185	NM_009680	ENSMUSG00000021686	Ap3b1	AP-3|AU015684|C78395|Hps2|beta3A|pe|pearl|rim2	adaptor-related protein complex 3, beta 1 subunit	protein-coding
unique_peak2-36517-3-5--0.998945590680433-0.96108193396963	chr2	158515970	158516264	+	0	NA	intron (NM_001159662, intron 1 of 10)	intron (NM_001159662, intron 1 of 10)	23246	NM_001159662	228852	Mm.150540	NM_153089	ENSMUSG00000037754	Ppp1r16b	ANKRD4|C130078N17Rik|TIMAP|Wdt4	protein phosphatase 1, regulatory (inhibitor) subunit 16B	protein-coding
unique_peak2-38461-3-9--1.73591118484664-1.57096726280955	chr7	28801841	28802266	+	0	NA	Intergenic	ORR1B1-int|LTR|MaLR	-2919	NM_001254951	100043772	Mm.129275	NM_001100456		Zfp850	C130069I09Rik|Gm4636	zinc finger protein 850	protein-coding
common_peak2-20353-10-6-0.549060422951165-1.21398586181642	chr10	9503036	9503548	+	0	NA	intron (NM_001081344, intron 19 of 25)	(TG)n|Simple_repeat|Simple_repeat	98772	NR_038036	620417	Mm.378085	NR_038036		Gm6150	-	predicted gene 6150	ncRNA
common_peak1-12017-18-21--0.146512467408946-0.306326795069975	chr17	15395968	15396784	+	0	NA	Intergenic	Intergenic	-18629	NR_046164	328747	Mm.256835	NR_046164	ENSMUSG00000097624	Gm5091	C330048F19	predicted gene 5091	ncRNA
common_peak2-22444-9-15--0.81038659359578-0.630231561310125	chr13	40917023	40917559	+	0	NA	Intergenic	MuLV-int|LTR|ERV1	-37846	NM_023887	14538	Mm.314757	NM_008105	ENSMUSG00000021360	Gcnt2	5330430K10Rik|IGnT|IGnTA|IGnTB|IGnTC	glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	protein-coding
unique_peak1-7394-14-6-1.09186123830004-1.16633110333236	chrX	103555076	103555681	+	0	NA	Intergenic	Intergenic	50213	NR_105803	102465963		NR_105803	miRBase:MI0021913	Mir6382	mmu-mir-6382	microRNA mir-6382	ncRNA
unique_peak1-5160-11-4-1.18676548936425-1.68134727924692	chr5	24825856	24826409	+	0	NA	exon (NM_001081383, exon 34 of 59)	exon (NM_001081383, exon 34 of 59)	97421	NM_144908	231050	Mm.246718	NM_144908	ENSMUSG00000038072	Galnt11	A430075I06Rik|AI648252|E430002F06Rik	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11	protein-coding
unique_peak1-2907-15-10-0.552733131918359-0.604422558181019	chr17	46609802	46610528	+	0	NA	intron (NM_001162864, intron 10 of 14)	intron (NM_001162864, intron 10 of 14)	14459	NM_001162864	106763	Mm.297613	NM_175351	ENSMUSG00000015599	Ttbk1	AU017937|AW048023|C330008L01Rik	tau tubulin kinase 1	protein-coding
common_peak1-17291-64-78-0.1616656535315-0.431920820308006	chr6	136803561	136805485	+	0	NA	intron (NM_026639, intron 1 of 2)	intron (NM_026639, intron 1 of 2)	1598	NM_026639	109978	Mm.31840	NM_026639	ENSMUSG00000030217	Art4	4432404K01Rik|ARTC4|DO|DOK1	ADP-ribosyltransferase 4	protein-coding
unique_peak2-35209-8-7-0.00522241794757061-1.00793137938329	chr16	87306631	87307195	+	0	NA	Intergenic	MTE2a|LTR|MaLR	-47517	NM_001159331	67768	Mm.296532	NM_026366	ENSMUSG00000044442	N6amt1	5830445C04Rik|Hemk2|Pred28	N-6 adenine-specific DNA methyltransferase 1 (putative)	protein-coding
unique_peak1-4375-15-0-4.01216475055566-5.11750992628768	chr2	158130080	158130793	+	0	NA	Intergenic	Intergenic	-1793	NM_008489	16803	Mm.218846	NM_008489	ENSMUSG00000016024	Lbp	Bpifd2|Ly88	lipopolysaccharide binding protein	protein-coding
common_peak1-18296-11-8-0.338768582809301-1.14218153353838	chr8	45610112	45610643	+	0	NA	Intergenic	Intergenic	-425185	NM_001081286	14107	Mm.27365	NM_001081286	ENSMUSG00000070047	Fat1	2310038E12Rik|AU023433|Fath|mFat1	FAT tumor suppressor homolog 1 (Drosophila)	protein-coding
unique_peak1-6330-7-4-0.477162735410827-1.09384600808989	chr7	46960594	46961080	+	0	NA	Intergenic	Intergenic	187701	NM_001004139	70227	Mm.333800	NM_001004139	ENSMUSG00000068959	Zfp619	3000002G13Rik	zinc finger protein 619	protein-coding
common_peak1-9172-19-16-0.315224485411347-0.448200956659575	chr11	78182847	78183719	+	0	NA	intron (NM_008238, intron 3 of 8)	intron (NM_008238, intron 3 of 8)	16827	NM_008238	15218	Mm.4496	NM_008238	ENSMUSG00000002057	Foxn1	D11Bhm185e|Fkh19|HFH-11|Hfh11|Whn|nu|nude	forkhead box N1	protein-coding
unique_peak2-35825-5-7--0.704380336005853-1.01466476204226	chr18	64986099	64986495	+	0	NA	Intergenic	Intergenic	-61113	NM_001114386	83814	Mm.98668	NM_031881	ENSMUSG00000024589	Nedd4l	1300012C07Rik|Nedd4-2|Nedd4b	neural precursor cell expressed, developmentally down-regulated gene 4-like	protein-coding
unique_peak2-37141-4-13--1.83081543591085-2.04196296489515	chr4	28813623	28814206	+	0	NA	intron (NM_001290434, intron 5 of 16)	intron (NM_001290434, intron 5 of 16)	73619	NM_001122889	13841	Mm.257266	NM_010141	ENSMUSG00000028289	Epha7	Cek11|Ebk|Ehk3|Hek11|Mdk1	Eph receptor A7	protein-coding
common_peak2-28962-10-5-0.771452844287613-1.33892459842472	chr5	103735509	103735913	+	0	NA	Intergenic	L1MD|LINE|L1	-7663	NR_040699	74624	Mm.389662	NR_040699		4930429D17Rik	-	RIKEN cDNA 4930429D17 gene	ncRNA
common_peak1-18089-35-106--1.31009672793864-6.27131066415621	chr8	94666404	94667313	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	213161	NR_110452	71296	Mm.86664	NR_033641	ENSMUSG00000031736	Crnde	4933436C20Rik	colorectal neoplasia differentially expressed (non-protein coding)	ncRNA
common_peak1-19498-10-9-0.0344872501214071-1.05503135781948	chrX	160994041	160994560	+	0	NA	Intergenic	Intergenic	58465	NM_027027	69299	Mm.79031	NM_027027	ENSMUSG00000031384	Asb9	1700011M07Rik	ankyrin repeat and SOCS box-containing 9	protein-coding
common_peak2-20984-11-27--1.29866133780599-1.81053432848961	chr11	22286319	22287021	+	0	NA	Intergenic	Intergenic	-99872	NM_001252515	216565	Mm.491265	NM_153078	ENSMUSG00000042302	Ehbp1	AF424697|Flj21950|NACSIN	EH domain binding protein 1	protein-coding
common_peak2-19604-24-25-0.0927701846266249-0.337923771396236	chr1	33813739	33814832	+	0	NA	intron (NM_145392, intron 1 of 2)	intron (NM_145392, intron 1 of 2)	310	NM_145392	213539	Mm.247037	NM_145392	ENSMUSG00000042215	Bag2	2610042A13Rik|BC016230	BCL2-associated athanogene 2	protein-coding
common_peak2-24033-197-254-0.420489176829162-3.07329006515184	chr16	23986668	23990467	+	0	NA	intron (NM_009744, intron 1 of 9)	intron (NM_009744, intron 1 of 9)	131	NM_009744	12053	Mm.347398	NM_009744	ENSMUSG00000022508	Bcl6	Bcl5	B cell leukemia/lymphoma 6	protein-coding
common_peak1-8525-15-17--0.157760250886656-0.307611222530528	chr10	86685331	86685992	+	0	NA	intron (NM_029685, intron 4 of 5)	intron (NM_029685, intron 4 of 5)	164870	NM_029685	76640	Mm.78423	NM_029685	ENSMUSG00000047129	1700113H08Rik	-	RIKEN cDNA 1700113H08 gene	protein-coding
unique_peak2-38364-11-15--0.491306415748387-0.435191258261915	chr7	4876997	4877696	+	0	NA	promoter-TSS (NM_173008)	promoter-TSS (NM_173008)	-100	NM_173008	269855	Mm.44190	NM_173008	ENSMUSG00000035279	Ssc5d	A430110N23Rik|S5D-SRCRB	scavenger receptor cysteine rich family, 5 domains	protein-coding
common_peak1-12641-23-9-1.39983940962172-2.17218792383888	chr18	35093536	35094412	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-2317	NM_144866	225363	Mm.329353	NM_144866	ENSMUSG00000024360	Etf1	AI463371|D6Ertd109e|ERF|ERF1|SUP45L1|TB3-1	eukaryotic translation termination factor 1	protein-coding
common_peak1-9664-8-4-0.683294323060208-1.21878474469819	chr12	3422192	3422687	+	0	NA	intron (NR_030694, intron 1 of 2)	B3A|SINE|B2	4308	NR_030694	100043040	Mm.415417	NR_030694	ENSMUSG00000071456	1110002L01Rik	-	RIKEN cDNA 1110002L01 gene	ncRNA
unique_peak1-1000-8-7-0.00522241794757061-1.00793137938329	chr11	70688332	70688792	+	0	NA	intron (NM_001291142, intron 2 of 16)	intron (NM_001291142, intron 2 of 16)	30299	NM_001291142	54189	Mm.7087	NM_019400	ENSMUSG00000020817	Rabep1	Rab5ep|rabaptin-5|rabaptin-5alpha	rabaptin, RAB GTPase binding effector protein 1	protein-coding
unique_peak1-593-9-0-3.18961340640422-3.01029995663981	chr10	16589805	16590326	+	0	NA	Intergenic	Intergenic	225523	NR_038020	100504235	Mm.84044	NR_038020		Gm20125	-	predicted gene, 20125	ncRNA
common_peak1-15867-27-39--0.330382143992127-0.451135909022758	chr5	5343072	5344188	+	0	NA	intron (NM_011074, intron 2 of 14)	intron (NM_011074, intron 2 of 14)	36621	NM_011074	18647	Mm.389061	NM_011074	ENSMUSG00000028926	Cdk14	Pftk1|mKIAA0834	cyclin-dependent kinase 14	protein-coding
unique_peak1-3967-7-0-2.79909083029819-2.40823996531185	chr2	31612540	31613071	+	0	NA	intron (NM_001283047, intron 2 of 11)	intron (NM_001283047, intron 2 of 11)	-2654	NM_009594	11350	Mm.1318	NM_009594	ENSMUSG00000026842	Abl1	AI325092|Abl|E430008G22Rik|c-Abl	c-abl oncogene 1, non-receptor tyrosine kinase	protein-coding
common_peak1-12404-38-64--0.450915153729924-0.799068699966534	chr17	71526632	71527887	+	0	NA	Intergenic	(TTTTG)n|Simple_repeat|Simple_repeat	-6059	NM_022882	64898	Mm.227924	NM_022882	ENSMUSG00000024052	Lpin2	2610511G02Rik|AI481352|AW742896	lipin 2	protein-coding
unique_peak1-1442-50-5-3.4559778157578-13.8195666961957	chr12	100775430	100777098	+	0	NA	Intergenic	Intergenic	-87980	NM_183186	71375	Mm.341972	NM_183186	ENSMUSG00000033713	Foxn3	5430426H20Rik|AA589593|AW556347|Ches1|Ches1l|HTLFL1	forkhead box N3	protein-coding
unique_peak2-36088-6-8--0.60452689106201-1.03789460276074	chr19	57132077	57132542	+	0	NA	intron (NM_001290813, intron 12 of 20)	B3|SINE|B2	-49244	NM_001177797	226250	Mm.226284	NM_146102	ENSMUSG00000025083	Afap1l2	AU041783|C86904|mKIAA1914	actin filament associated protein 1-like 2	protein-coding
common_peak2-28943-11-13--0.298661337805991-0.337263207250336	chr5	99242323	99242921	+	0	NA	Intergenic	ORR1C2|LTR|MaLR	-40836	NM_173404	110075	Mm.209571	NM_173404	ENSMUSG00000029335	Bmp3	9130206H07|9530029I04Rik	bone morphogenetic protein 3	protein-coding
unique_peak1-4409-8-4-0.683294323060208-1.21878474469819	chr2	167485766	167486185	+	0	NA	intron (NM_145538, intron 1 of 5)	intron (NM_145538, intron 1 of 5)	1069	NM_145538	407243	Mm.4863	NM_145538		Tmem189	AI840826|Kua	transmembrane protein 189	protein-coding
unique_peak2-34020-2-6--1.72480917832092-1.26211192963361	chr12	105784126	105784571	+	0	NA	Intergenic	Intergenic	-72902	NM_010351	14836	Mm.129	NM_010351	ENSMUSG00000021095	Gsc	-	goosecoid homeobox	protein-coding
unique_peak2-34594-3-8--1.58390809140159-1.39487600375387	chr14	70136319	70136762	+	0	NA	Intergenic	RLTR10C|LTR|ERVK	-4163	NM_134078	105513	Mm.159637	NM_134078	ENSMUSG00000034190	Chmp7	4930596K11Rik|6330407G04Rik|AI450338|AW550775	charged multivesicular body protein 7	protein-coding
common_peak2-21869-19-25--0.297752391479405-0.376654945067947	chr12	55492035	55492705	+	0	NA	promoter-TSS (NR_033689)	promoter-TSS (NR_033689)	-65	NR_033689	665239	Mm.26856	NR_033689		Gm7550	EG665239|Gm666	predicted gene 7550	ncRNA
common_peak1-14712-20-19-0.16614668970383-0.348739088570342	chr3	78966590	78967463	+	0	NA	Intergenic	Intergenic	-17229	NM_001099624	76089	Mm.31220	NM_001099624	ENSMUSG00000062232	Rapgef2	5830453M24Rik|CNRasGEF|Pdzgef1|RA-GEF-1|mKIAA0313|nRapGEP	Rap guanine nucleotide exchange factor (GEF) 2	protein-coding
common_peak1-8925-28-45--0.470602836235551-0.703513783457792	chr11	52003571	52004868	+	0	NA	Intergenic	Intergenic	23270	NM_207253	276865	Mm.377871	NM_207253	ENSMUSG00000060170	Olfr1371	GA_x6K02T2QP88-3214035-3214970|MOR256-58	olfactory receptor 1371	protein-coding
common_peak2-24985-12-4-1.32684789020028-2.04196296489515	chr18	9517185	9517570	+	0	NA	Intergenic	Intergenic	-67229	NM_026484	67974	Mm.86523	NM_026484	ENSMUSG00000024286	Ccny	1700025H17Rik|3110050L10Rik|4631402G10Rik|5730405I09Rik	cyclin Y	protein-coding
common_peak1-8897-27-33--0.0959168903551033-0.304370854244436	chr11	49086526	49087539	+	0	NA	Intergenic	Intergenic	-6620	NM_146471	258463	Mm.377517	NM_146471	ENSMUSG00000059864	Olfr1393	MOR256-24	olfactory receptor 1393	protein-coding
unique_peak1-7081-10-5-0.771452844287613-1.33892459842472	chr9	21798354	21798863	+	0	NA	intron (NM_001163787, intron 6 of 12)	ORR1B1|LTR|MaLR	-4711	NM_023622	71746	Mm.110594	NM_023622	ENSMUSG00000040146	Rgl3	1300003D20Rik|mFLJ00153	ral guanine nucleotide dissociation stimulator-like 3	protein-coding
common_peak1-11125-88-105-0.287491954607334-0.836487378008713	chr15	64381320	64383478	+	0	NA	Intergenic	Intergenic	-167918	NM_010026	13196	Mm.277236	NM_010026	ENSMUSG00000022377	Asap1	AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19	ArfGAP with SH3 domain, ankyrin repeat and PH domain1	protein-coding
unique_peak2-36915-5-10--1.16381195464315-1.33892459842472	chr3	98356050	98356624	+	0	NA	TTS (NM_008294).2	TTS (NM_008294).2	11529	NM_001111336	15495	Mm.14309	NM_008294	ENSMUSG00000095143	Hsd3b4	-	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 4	protein-coding
common_peak1-16874-46-52-0.170075488685603-0.425219862997731	chr6	66896171	66897550	+	0	NA	intron (NM_001177560, intron 3 of 4)	intron (NM_001177560, intron 3 of 4)	49975	NM_001177558	14701	Mm.234342	NM_025278	ENSMUSG00000036402	Gng12	2010305F15Rik|AA536815|AI115529|AI314170|AI842738	guanine nucleotide binding protein (G protein), gamma 12	protein-coding
common_peak2-29844-13-6-0.971117108580164-1.01572999746118	chr6	97208433	97208835	+	0	NA	Intergenic	Intergenic	-5860	NM_001081157	320502	Mm.68163	NM_001081157	ENSMUSG00000044086	Lmod3	5430424A14Rik	leiomodin 3 (fetal)	protein-coding
common_peak2-22436-11-12--0.191746133889479-0.310474156842889	chr13	38658594	38658973	+	0	NA	Intergenic	Intergenic	-38090	NM_001289598	105245	Mm.28622	NM_145367	ENSMUSG00000038991	Txndc5	AL022641|ERp46|PC-TRP	thioredoxin domain containing 5	protein-coding
unique_peak2-35271-3-8--1.58390809140159-1.39487600375387	chr17	3366809	3367226	+	0	NA	intron (NM_001122998, intron 1 of 26)	B4A|SINE|B4	-30190	NM_011878	24001	Mm.137134	NM_011878	ENSMUSG00000023800	Tiam2	3000002F19Rik|STEF|mKIAA2016	T cell lymphoma invasion and metastasis 2	protein-coding
common_peak2-30247-37-68--0.58253138529235-1.22876277037648	chr7	6154926	6156581	+	0	NA	intron (NM_178028, intron 2 of 5)	ID_B1|SINE|B4	7061	NM_178028	232836	Mm.246599	NM_178028	ENSMUSG00000034660	Galp	-	galanin-like peptide	protein-coding
unique_peak2-35575-0-5--3.42509343119537-1.32905871926422	chr17	70878121	70878548	+	0	NA	intron (NM_001128180, intron 1 of 9)	intron (NM_001128180, intron 1 of 9)	6884	NM_001128180	224997	Mm.311840	NM_027712	ENSMUSG00000003279	Dlgap1	4933422O14Rik|9630002F18|AI845682|AI848168|BB075781|D17Bwg0511e|GKAP/SAPAP|GKPA/SAPAP|Gkap|Sapap1|mKIAA4162	discs, large (Drosophila) homolog-associated protein 1	protein-coding
common_peak1-17578-9-15--0.81038659359578-0.630231561310125	chr7	38183099	38183594	+	0	NA	Intergenic	Intergenic	371425	NM_172385	243937	Mm.322505	NM_172385	ENSMUSG00000043456	Zfp536	9630010P11Rik|Znf536|mKIAA0390	zinc finger protein 536	protein-coding
unique_peak1-185-7-8--0.370834171144123-1.00793137938329	chr1	75168491	75168984	+	0	NA	TTS (NM_001159905)	TTS (NM_001159905)	3428	NM_026846	68818	Mm.32646	NM_026846	ENSMUSG00000026197	Zfand2b	1110060O18Rik|C81256	zinc finger, AN1 type domain 2B	protein-coding
common_peak2-32177-94-134-0.0527739707984853-0.329562570646051	chr9	113707516	113708603	+	0	NA	intron (NM_001286603, intron 1 of 4)	intron (NM_001286603, intron 1 of 4)	5611	NM_001286603	76499	Mm.222272	NM_029633	ENSMUSG00000033392	Clasp2	1500004F14Rik|8030404L10Rik|C77448|CLASP2beta|mKIAA0627	CLIP associating protein 2	protein-coding
common_peak2-24615-20-35--0.681850216851119-0.950553505527076	chr17	33824526	33825401	+	0	NA	non-coding (NR_045523, exon 5 of 6)	non-coding (NR_045523, exon 5 of 6)	-2560	NM_029804	76936	Mm.311439	NM_029804	ENSMUSG00000059208	Hnrnpm	2610023M21Rik|AA409009|Hnrpm|mKIAA4193	heterogeneous nuclear ribonucleoprotein M	protein-coding
common_peak2-26845-19-30--0.551508983725189-0.647723624534446	chr2	154372180	154372846	+	0	NA	intron (NM_021546, intron 8 of 12)	intron (NM_021546, intron 8 of 12)	-2127	NM_029305	75480	Mm.440434	NM_029305	ENSMUSG00000038523	1700003F12Rik	-	RIKEN cDNA 1700003F12 gene	protein-coding
common_peak2-20814-26-34--0.201383924786504-0.35535220421655	chr10	127739387	127740281	+	0	NA	promoter-TSS (NM_001252327)	promoter-TSS (NM_001252327)	-557	NM_133992	103135	Mm.244183	NM_133992	ENSMUSG00000005682	Pan2	1200014O24Rik|AI047843|AW742773|Usp52|mKIAA0710	PAN2 polyA specific ribonuclease subunit homolog (S. cerevisiae)	protein-coding
common_peak1-13954-38-67--0.516010181951809-0.985819031340023	chr2	91265261	91266102	+	0	NA	intron (NM_175123, intron 1 of 8)	intron (NM_175123, intron 1 of 8)	19118	NM_175123	228356	Mm.386861	NM_175123	ENSMUSG00000040591	1110051M20Rik	AI586322	RIKEN cDNA 1110051M20 gene	protein-coding
unique_peak1-5316-10-0-3.35641534500877-3.31132995230379	chr5	77369372	77369866	+	0	NA	intron (NM_172146, intron 1 of 10)	intron (NM_172146, intron 1 of 10)	-10817	NM_025939	67054	Mm.182931	NM_025939	ENSMUSG00000029247	Paics	2610511I09Rik|ADE2H1|AIRC|PAIS	phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase	protein-coding
unique_peak1-4583-16-4-1.7963355473807-2.18192634393779	chr3	57385059	57385897	+	0	NA	Intergenic	Lx6|LINE|L1	-5646	NM_001168281	97064	Mm.405029	NM_133784	ENSMUSG00000027803	Wwtr1	2310058J06Rik|2610021I22Rik|C78399|Taz	WW domain containing transcription regulator 1	protein-coding
unique_peak1-5002-15-10-0.552733131918359-0.604422558181019	chr4	119121401	119122213	+	0	NA	intron (NM_001014900, intron 6 of 7)	intron (NM_001014900, intron 6 of 7)	26518	NM_001014900	332934	Mm.388911	NM_001014900	ENSMUSG00000070806	Zmynd12	AI414736	zinc finger, MYND domain containing 12	protein-coding
common_peak1-14756-67-95--0.040551017938161-0.30565023687716	chr3	88140305	88143125	+	0	NA	intron (NM_178246, intron 1 of 21)	intron (NM_178246, intron 1 of 21)	1533	NM_178246	229512	Mm.439830	NM_173188	ENSMUSG00000001415	Smg5	BC024683|mKIAA1089	Smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans)	protein-coding
unique_peak1-5134-16-9-0.796335547380699-0.844317084070804	chr5	5649810	5650544	+	0	NA	intron (NM_172447, intron 2 of 22)	Lx3_Mus|LINE|L1	14055	NM_172447	207686	Mm.319007	NM_172447		Cfap69	4921525K03|A330021E22Rik|AI427898	cilia and flagella associated protein 69	protein-coding
common_peak1-15754-19-28--0.455293668465885-0.518921928796332	chr4	150371362	150372243	+	0	NA	intron (NM_011910, intron 1 of 3)	intron (NM_011910, intron 1 of 3)	596	NM_011910	24111	Mm.89984	NM_011910	ENSMUSG00000028963	Uts2	UII|Ucn2|prepro-UII	urotensin 2	protein-coding
common_peak2-30254-11-7-0.508693584251613-1.21681515183528	chr7	12834174	12834607	+	0	NA	Intergenic	Intergenic	11638	NM_134210	171244	Mm.377200	NM_134210	ENSMUSG00000094078	Vmn1r81	V1rg9	vomeronasal 1 receptor 81	protein-coding
unique_peak2-37719-2-6--1.72480917832092-1.26211192963361	chr5	105637220	105637505	+	0	NA	Intergenic	Intergenic	31190	NM_001039646	626578	Mm.275893	NM_001039646	ENSMUSG00000054588	Gbp10	-	guanylate-binding protein 10	protein-coding
unique_peak1-5588-7-0-2.79909083029819-2.40823996531185	chr5	151246844	151247300	+	0	NA	intron (NM_172887, intron 46 of 60)	intron (NM_172887, intron 46 of 60)	57722	NR_024513	194292	Mm.300184	NR_024513		Gm5	Gm1812	predicted gene 5	ncRNA
common_peak2-32161-26-44--0.563954004171213-0.879657821688435	chr9	109073598	109074611	+	0	NA	Intergenic	L1Md_F|LINE|L1	-9568	NM_177069	320082	Mm.188028	NM_177069	ENSMUSG00000047237	Fbxw21	E330009P21Rik	F-box and WD-40 domain protein 21	protein-coding
unique_peak1-4737-20-7-1.48807478459119-2.07034318903805	chr3	107876757	107877508	+	0	NA	3' UTR (NM_001289719, exon 19 of 19)	3' UTR (NM_001289719, exon 19 of 19)	11212	NM_001289720	109674	Mm.274335	NM_028779	ENSMUSG00000027889	Ampd2	1200014F01Rik|AI552571|Ampd-2	adenosine monophosphate deaminase 2	protein-coding
common_peak1-14010-68-32-1.52556665993984-7.39730869226063	chr2	109405859	109407547	+	0	NA	Intergenic	PB1D10|SINE|Alu	-108154	NM_007540	12064	Mm.1442	NM_007540	ENSMUSG00000048482	Bdnf	-	brain derived neurotrophic factor	protein-coding
common_peak1-14400-102-74-1.04226978634367-6.52806215985578	chr2	173265186	173268556	+	0	NA	Intergenic	Intergenic	-81222	NM_028158	72221	Mm.46132	NM_028158	ENSMUSG00000027518	1700021F07Rik	-	RIKEN cDNA 1700021F07 gene	protein-coding
common_peak2-31619-12-7-0.648775985087639-0.697979855752659	chr8	123050744	123051184	+	0	NA	intron (NM_198671, intron 1 of 15)	intron (NM_198671, intron 1 of 15)	-8793	NM_001145897	382034	Mm.334856	NM_198671	ENSMUSG00000031822	Gse1	2210013I18Rik|mKIAA0182	genetic suppressor element 1	protein-coding
unique_peak2-35189-9-11--0.395349094316936-0.344532117358383	chr16	57420284	57420895	+	0	NA	intron (NM_001040397, intron 1 of 4)	intron (NM_001040397, intron 1 of 4)	67199	NM_001040397	78749	Mm.328360	NM_001040397	ENSMUSG00000043336	Filip1l	4631422O05Rik|Doc1	filamin A interacting protein 1-like	protein-coding
unique_peak2-39893-3-11--1.99894559068043-1.95434855131066	chrX	77432924	77433587	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-516481	NM_028025	71967	Mm.379207	NM_028025	ENSMUSG00000046942	Mageb16	2410003J06Rik	melanoma antigen family B, 16	protein-coding
unique_peak1-3528-38-10-2.11202104066123-6.18152551155272	chr19	20558436	20560163	+	0	NA	Intergenic	Intergenic	-7906	NR_015502	320092	Mm.482524	NR_015502		E030003E18Rik	1700127G21Rik	RIKEN cDNA E030003E18 gene	ncRNA
unique_peak1-416-9-1-2.18961340640422-2.31132995230379	chr1	160058579	160059067	+	0	NA	Intergenic	Intergenic	227568	NM_207583	240843	Mm.329579	NM_207583	ENSMUSG00000004031	Brinp2	6430517E21Rik|BB361039|Fam5b|mKIAA1747	bone morphogenic protein/retinoic acid inducible neural-specific 2	protein-coding
common_peak1-10908-20-48--1.12663505952402-2.44914526326141	chr15	3995070	3995818	+	0	NA	intron (NM_024188, intron 3 of 16)	L1ME3A|LINE|L1	-18038	NR_028266	414066	Mm.394461	NR_028266		BC037032	-	cDNA Sequence BC037032	ncRNA
common_peak1-8542-10-12--0.344024373132323-0.340565874754526	chr10	93094743	93095406	+	0	NA	Intergenic	ORR1B2|LTR|MaLR	-8720	NM_021320	57764	Mm.483868	NM_021320		Ntn4	-	netrin 4	protein-coding
unique_peak2-34082-6-14--1.34149248522822-1.01572999746118	chr13	6548141	6548779	+	0	NA	intron (NM_145131, intron 1 of 26)	intron (NM_145131, intron 1 of 26)	1057	NM_145131	69617	Mm.41933	NM_145131	ENSMUSG00000021193	Pitrm1	2310012C15Rik|AA410010|MP-1|MP1|Ntup1|PreP|mKIAA1104	pitrilysin metallepetidase 1	protein-coding
unique_peak1-2487-9-3-1.18961340640422-1.57096726280955	chr16	8795130	8795621	+	0	NA	Intergenic	Intergenic	-34818	NM_001081400	69053	Mm.390868	NM_001081400	ENSMUSG00000022507	1810013L24Rik	1110017P05Rik|3010002C02Rik|AA792997|AW124177|Gm19906|R74903	RIKEN cDNA 1810013L24 gene	protein-coding
unique_peak1-6634-9-3-1.18961340640422-1.57096726280955	chr8	10925581	10926171	+	0	NA	non-coding (NR_030715, exon 3 of 3)	non-coding (NR_030715, exon 3 of 3)	2581	NR_030715	665306	Mm.358758	NR_030715	ENSMUSG00000038917	3930402G23Rik	-	RIKEN cDNA 3930402G23 gene	ncRNA
common_peak1-18495-25-40--0.495702099272978-0.683454027796267	chr8	85299289	85300192	+	0	NA	Intergenic	RMER10A|LTR|ERVL	-1715	NM_145600	30932	Mm.269248	NM_145600	ENSMUSG00000031711	Zfp330	BC008086|Noa36|Znf330	zinc finger protein 330	protein-coding
unique_peak1-1358-8-0-3.00522241794757-2.70926996097583	chr12	24644060	24644673	+	0	NA	Intergenic	Intergenic	137768	NM_001256489	66808	Mm.379124	NM_001256489		9030624G23Rik	-	RIKEN cDNA 9030624G23 gene	protein-coding
common_peak2-20071-8-6-0.197867495889966-1.03789460276074	chr1	153140680	153140981	+	0	NA	Intergenic	Intergenic	-50798	NM_001039512	117198	Mm.33764	NM_028582	ENSMUSG00000023150	Ivns1abp	1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850	influenza virus NS1A binding protein	protein-coding
common_peak1-18307-12-6-0.841421063030034-1.58711810488664	chr8	46445746	46446303	+	0	NA	intron (NM_153535, intron 1 of 13)	intron (NM_153535, intron 1 of 13)	21621	NM_153535	212326	Mm.51259	NM_153535	ENSMUSG00000070044	Fam149a	AW213256|mKIAA4166	family with sequence similarity 149, member A	protein-coding
unique_peak1-4212-14-1-2.89921616035764-3.91338994363176	chr2	119482105	119482845	+	0	NA	intron (NM_027175, intron 3 of 4)	B1_Mus2|SINE|Alu	6059	NM_027175	69702	Mm.5390	NM_027175	ENSMUSG00000027305	Ndufaf1	2410001M24Rik|CGI-65|CIA30	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1	protein-coding
common_peak1-16382-217-257-0.572023626242284-5.80126314798864	chr5	123138233	123140440	+	0	NA	intron (NM_001038845, intron 12 of 12)	intron (NM_001038845, intron 12 of 12)	-18230	NM_011026	18438	Mm.290884	NM_011026	ENSMUSG00000029470	P2rx4	AI504491|AW555605|D5Ertd444e|P2X4	purinergic receptor P2X, ligand-gated ion channel 4	protein-coding
unique_peak1-1635-9-7-0.18961340640422-1.05908390183068	chr13	49307337	49307892	+	0	NA	intron (NM_026738, intron 1 of 5)	(TCTG)n|Simple_repeat|Simple_repeat	3781	NM_026738	68480	Mm.3336	NM_026738	ENSMUSG00000037960	1110007C09Rik	AI851695|Bincard	RIKEN cDNA 1110007C09 gene	protein-coding
unique_peak1-4461-8-1-2.00522241794757-2.05605744720049	chr2	179939338	179939787	+	0	NA	intron (NM_001081171, intron 6 of 78)	PB1|SINE|Alu	21002	NM_001081171	16776	Mm.4339	NM_001081171	ENSMUSG00000015647	Lama5	AA408760|AA408762|AI853660|[a]5|laminin-511|mKIAA0533	laminin, alpha 5	protein-coding
common_peak2-23200-33-29-0.42444696691701-0.683454027796267	chr15	87653353	87654660	+	0	NA	Intergenic	polypyrimidine|Low_complexity|Low_complexity	-27633	NR_105817	102465209		NR_105817	miRBase:MI0021927	Mir6393	mmu-mir-6393	microRNA mir-6393	ncRNA
unique_peak2-33011-0-4--3.16205902536157-1.10720996964787	chr10	63333953	63334350	+	0	NA	intron (NM_001164519, intron 2 of 12)	intron (NM_001164519, intron 2 of 12)	50348	NM_001164519	216033	Mm.444692	NM_177612	ENSMUSG00000060843	Ctnna3	4930429L08Rik|4933408A16|Catna3|Vr22	catenin (cadherin associated protein), alpha 3	protein-coding
unique_peak1-1719-7-1-1.79909083029819-1.80617997398389	chr13	95819913	95820439	+	0	NA	intron (NM_172263, intron 9 of 19)	intron (NM_172263, intron 9 of 19)	73877	NM_172590	218460	Mm.33856	NM_172590	ENSMUSG00000042015	Wdr41	B830029I03Rik|MSTP048	WD repeat domain 41	protein-coding
unique_peak2-32513-11-18--0.739233929191972-0.671582559449692	chr1	54599773	54600554	+	0	NA	intron (NM_001163314, intron 3 of 26)	intron (NM_001163314, intron 3 of 26)	14365	NM_001163314	241062	Mm.103539	NM_175508	ENSMUSG00000073678	Pgap1	5033403E17Rik|9030223K07Rik|A530084K22|D230012E17Rik|oto	post-GPI attachment to proteins 1	protein-coding
common_peak2-24646-7-21--1.66034078833911-1.89173646618541	chr17	35165080	35165620	+	0	NA	promoter-TSS (NM_023893)	promoter-TSS (NM_023893)	-389	NM_023893	78376	Mm.390966	NM_023893	ENSMUSG00000036185	Sapcd1	2810436B06Rik|G7d|Ng23	suppressor APC domain containing 1	protein-coding
unique_peak1-2029-10-1-2.35641534500877-2.57096726280955	chr15	11987602	11988227	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-59692	NM_011767	22763	Mm.273496	NM_011767	ENSMUSG00000022201	Zfr	C920030H05Rik	zinc finger RNA binding protein	protein-coding
common_peak2-31391-15-9-0.690236655668294-0.732381977911291	chr8	87070676	87071110	+	0	NA	intron (NM_007578, intron 11 of 46)	intron (NM_007578, intron 11 of 46)	115858	NM_010499	15936	Mm.399	NM_010499	ENSMUSG00000053560	Ier2	AI317238|Ch1|Pip92	immediate early response 2	protein-coding
unique_peak2-39772-5-9--1.02630843089322-1.21398586181642	chrX	7670635	7671177	+	0	NA	Intergenic	B3|SINE|B2	-3289	NM_009515	22376	Mm.4735	NM_009515	ENSMUSG00000031165	Was	U42471|Wasp	Wiskott-Aldrich syndrome homolog (human)	protein-coding
unique_peak2-39395-3-6--1.22133801201688-1.08602067057793	chr9	28278808	28279291	+	0	NA	intron (NM_177906, intron 2 of 7)	intron (NM_177906, intron 2 of 7)	680195	NM_177906	330908	Mm.379474	NM_177906	ENSMUSG00000062257	Opcml	2900075O15Rik|3732419F12|AI844366|B930023M13Rik|C230027C17|Gm181|Obcam	opioid binding protein/cell adhesion molecule-like	protein-coding
common_peak2-27448-42-41-0.350011905088423-0.688538237251116	chr3	90213099	90213851	+	0	NA	intron (NM_178876, intron 8 of 30)	intron (NM_178876, intron 8 of 30)	-19626	NM_011988	26568	Mm.45519	NM_011988	ENSMUSG00000027932	Slc27a3	Acsvl3|FATP3|Vlcs-3	solute carrier family 27 (fatty acid transporter), member 3	protein-coding
common_peak2-22239-54-104--0.541159756036389-1.57148672735882	chr13	32964415	32966772	+	0	NA	Intergenic	MER2|DNA|MER2_type	-22539	NM_025429	66222	Mm.20144	NM_025429	ENSMUSG00000044734	Serpinb1a	1190005M04Rik|AI325983|EI|EIA|ELANH2|LEI|M/NEI|MNEI|PI2	serine (or cysteine) peptidase inhibitor, clade B, member 1a	protein-coding
unique_peak2-38114-2-7--1.91745425626332-1.45399745587252	chr6	72560983	72561603	+	0	NA	3' UTR (NM_009444, exon 4 of 4)	3' UTR (NM_009444, exon 4 of 4)	5449	NM_009444	22135	Mm.246563	NM_009444		Tgoln2	TGN38B|TGN41|TGN46|Ttgn2	trans-golgi network protein 2	protein-coding
common_peak1-10032-14-21--0.560215458279653-0.519193887192484	chr13	13438063	13438718	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	47501	NM_031999	83924	Mm.379269	NM_031999	ENSMUSG00000021306	Gpr137b	AI788917|AU016435|AW546472|C730041E01|C80550|C80741|D13Abb1e|Tm7sf1	G protein-coupled receptor 137B	protein-coding
unique_peak2-35484-7-7--0.200909169701811-0.97990265578305	chr17	45599208	45599689	+	0	NA	intron (NM_027649, intron 2 of 7)	intron (NM_027649, intron 2 of 7)	12439	NM_027649	71020	Mm.44257	NM_027649	ENSMUSG00000023935	Spats1	1700011H05Rik|4933400B06Rik|Daip2|Ddip|Srsp1	spermatogenesis associated, serine-rich 1	protein-coding
common_peak1-8734-12-8-0.478850983645327-0.562038191119709	chr11	3394208	3394776	+	0	NA	TTS (NM_172791)	TTS (NM_172791)	6262	NM_172791	237625	Mm.100476	NM_172791	ENSMUSG00000034579	Pla2g3	-	phospholipase A2, group III	protein-coding
unique_peak2-33448-4-10--1.48289213249054-1.5150158574804	chr11	62825842	62826396	+	0	NA	Intergenic	Intergenic	-49042	NM_027660	71062	Mm.23534	NM_027660	ENSMUSG00000042189	Tekt3	4933407G07Rik	tektin 3	protein-coding
unique_peak2-32539-3-6--1.22133801201688-1.08602067057793	chr1	69611127	69611472	+	0	NA	intron (NM_011770, intron 5 of 7)	intron (NM_011770, intron 5 of 7)	121235	NM_011770	22779	Mm.106343	NM_011770	ENSMUSG00000025997	Ikzf2	A730095J18Rik|Helios|Zfpn1a2|Znfn1a2	IKAROS family zinc finger 2	protein-coding
common_peak2-26234-10-15--0.643584654991231-0.519648556297791	chr2	28513047	28513633	+	0	NA	intron (NM_001289575, intron 2 of 22)	intron (NM_001289575, intron 2 of 22)	16587	NM_022887	64930	Mm.224354	NM_022887	ENSMUSG00000026812	Tsc1	-	tuberous sclerosis 1	protein-coding
common_peak1-17036-58-50-0.623524592919002-1.72886723646024	chr6	91877079	91879042	+	0	NA	intron (NM_198668, intron 11 of 19)	intron (NM_198668, intron 11 of 19)	23833	NM_198668	381798	Mm.444785	NM_198668	ENSMUSG00000034063	4930590J08Rik	Gm1071	RIKEN cDNA 4930590J08 gene	protein-coding
common_peak2-24059-53-85--0.285291742286169-0.57422342071824	chr16	27388588	27389731	+	0	NA	5' UTR (NM_001025615, exon 1 of 10)	5' UTR (NM_001025615, exon 1 of 10)	117	NM_001289436	67501	Mm.258985	NM_026202	ENSMUSG00000038127	Ccdc50	C3orf6	coiled-coil domain containing 50	protein-coding
common_peak2-23327-35-46--0.123218593215134-0.322992865635707	chr15	37007519	37008164	+	0	NA	Intergenic	Intergenic	-70684	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
common_peak2-22748-20-10-1.0286431659539-1.30248952876293	chr13	111809102	111809600	+	0	NA	Intergenic	Intergenic	210288	NR_045908	73129	Mm.417826	NR_045908		3110015C05Rik	-	RIKEN cDNA 3110015C05 gene	ncRNA
common_peak1-10322-13-16--0.30899081061257-0.330004445983672	chr13	72628946	72629526	+	0	NA	Intergenic	Intergenic	136776	NR_030701	328287	Mm.235072	NR_030701		Gm20554	D430050G20	predicted gene, 20554	ncRNA
common_peak2-28357-21-47--1.01547323545492-1.94848605280957	chr4	136310492	136311581	+	0	NA	intron (NM_010142, intron 3 of 15)	intron (NM_010142, intron 3 of 15)	80890	NM_001290753	13844	Mm.250981	NM_010142	ENSMUSG00000028664	Ephb2	Cek5|Drt|ETECK|Erk|Hek5|Nuk|Prkm5|Qek5|Sek3|Tyro5	Eph receptor B2	protein-coding
common_peak2-26534-9-13--0.617741515653384-0.459837087125828	chr2	92008552	92009096	+	0	NA	Intergenic	Intergenic	-15515	NM_138755	192285	Mm.330408	NM_138755	ENSMUSG00000058318	Phf21a	80kDa|Bhc|Bhc80|D030065N23Rik|PFTF1	PHD finger protein 21A	protein-coding
unique_peak1-6602-8-0-3.00522241794757-2.70926996097583	chr8	33963830	33964321	+	0	NA	Intergenic	L1Md_A|LINE|L1	96423	NM_001177589	100042715	Mm.291093	NM_001177589		Gm3985	-	predicted gene 3985	protein-coding
common_peak1-8931-24-8-1.6232849013254-2.85636458546265	chr11	52341058	52342098	+	0	NA	Intergenic	Intergenic	131648	NM_153117	213673	Mm.291979	NM_153117	ENSMUSG00000036275	9530068E07Rik	C85061|Kct2	RIKEN cDNA 9530068E07 gene	protein-coding
common_peak2-27523-95-144--0.0319937449909204-0.304067044766384	chr3	95695419	95697454	+	0	NA	promoter-TSS (NM_153513)	promoter-TSS (NM_153513)	-583	NM_153513	229600	Mm.89556	NM_153513	ENSMUSG00000038543	BC028528	L259	cDNA sequence BC028528	protein-coding
unique_peak2-34237-2-7--1.91745425626332-1.45399745587252	chr13	53249215	53249847	+	0	NA	intron (NM_013846, intron 1 of 8)	intron (NM_013846, intron 1 of 8)	131947	NM_013846	26564	Mm.342774	NM_013846	ENSMUSG00000021464	Ror2	Ntrkr2|mRor2	receptor tyrosine kinase-like orphan receptor 2	protein-coding
common_peak2-26778-60-92--0.1848669494875-0.425896051280179	chr2	144269912	144271246	+	0	NA	Intergenic	B3A|SINE|B2	-14437	NR_033459	668917	Mm.152805	NR_033459	ENSMUSG00000083674	Zfp133-ps	OTTMUSG00000003825|Zfp133	zinc finger protein 133, pseudogene	pseudo
common_peak1-12198-19-15-0.402687326661686-0.519193887192487	chr17	32829669	32830367	+	0	NA	intron (NM_134127, intron 5 of 12)	ORR1A4|LTR|MaLR	7414	NM_134127	106648	Mm.26539	NM_134127	ENSMUSG00000073424	Cyp4f15	AI787289|Cyp4f-15	cytochrome P450, family 4, subfamily f, polypeptide 15	protein-coding
common_peak2-27474-9-8-0.0196884049619079-1.03275496310833	chr3	90707683	90708073	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-167706	NR_033593	619677	Mm.396622	NR_033593	ENSMUSG00000086377	4930529C04Rik	-	zinc finger, BED domain containing 4 pseudogene	pseudo
unique_peak1-7102-13-6-0.971117108580164-1.01572999746118	chr9	42097955	42098511	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-25850	NM_172769	235293	Mm.32700	NM_172769	ENSMUSG00000032018	Sc5d	A830037K02|A830073K23Rik|Sc5dl	sterol-C5-desaturase (fungal ERG3, delta-5-desaturase) homolog (S. cerevisae)	protein-coding
unique_peak2-37914-3-8--1.58390809140159-1.39487600375387	chr5	144256978	144257405	+	0	NA	intron (NM_144915, intron 11 of 14)	B1_Mm|SINE|Alu	31670	NM_009007	19353	Mm.292510	NM_009007	ENSMUSG00000001847	Rac1	AL023026|D5Ertd559e	RAS-related C3 botulinum substrate 1	protein-coding
common_peak2-20201-20-15-0.488074784591193-0.590343908676236	chr1	177441365	177441872	+	0	NA	Intergenic	Intergenic	-18942	NM_001199003	24012	Mm.7956	NM_011880		Rgs7	-	regulator of G protein signaling 7	protein-coding
common_peak1-10649-23-18-0.473839991065495-0.618644178587689	chr14	47353715	47354871	+	0	NA	Intergenic	Intergenic	-25923	NM_028222	72391	Mm.272394	NM_028222	ENSMUSG00000037628	Cdkn3	2410006H10Rik|KAP	cyclin-dependent kinase inhibitor 3	protein-coding
common_peak2-19580-69-68-0.486617990480563-1.41359277277622	chr1	16171917	16173313	+	0	NA	Intergenic	MIR|SINE|MIR	76652	NM_133832	98711	Mm.274376	NM_133832		Rdh10	3110069K09Rik|4921506A21Rik|AI875664|AW549993|D1Ertd762e|m366Asp	retinol dehydrogenase 10 (all-trans)	protein-coding
common_peak1-9477-9-21--1.26981821223308-1.37307999835977	chr11	106272252	106272802	+	0	NA	intron (NM_023913, intron 12 of 21)	B2_Mm2|SINE|B2	-28572	NM_010494	15896	Mm.394	NM_010494	ENSMUSG00000001029	Icam2	CD102|Icam-2|Ly-60	intercellular adhesion molecule 2	protein-coding
unique_peak1-915-13-1-2.77847203063777-3.64038867156802	chr11	48992125	48992860	+	0	NA	exon (NM_172793, exon 4 of 10)	exon (NM_172793, exon 4 of 10)	8099	NM_172793	237754	Mm.130787	NM_172793		Btnl9	B430208I01|Btn3|D330012D11Rik	butyrophilin-like 9	protein-coding
unique_peak1-18-14-2-2.31425365963649-3.28500101358144	chr1	180289316	180289976	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-21731	NM_016805	51810	Mm.86589	NM_016805	ENSMUSG00000039630	Hnrnpu	AA408410|AI256620|AL024194|AL024437|AW557595|C86794|Hnrpu|SAFA|Sp120|hnRNP U	heterogeneous nuclear ribonucleoprotein U	protein-coding
common_peak1-13214-42-59--0.164561267741335-0.34908710939424	chr19	24166550	24168112	+	0	NA	Intergenic	Intergenic	-61822	NM_001114174	381217	Mm.426078	NM_001114174	ENSMUSG00000071604	Fam189a2	AI414343|AI666772|Gm967	family with sequence similarity 189, member A2	protein-coding
unique_peak2-38153-2-8--2.08737925770563-1.65811743852845	chr6	86519969	86520430	+	0	NA	Intergenic	GA-rich|Low_complexity|Low_complexity	42804	NR_037961	72012	Mm.349174	NR_037960	ENSMUSG00000097048	1600020E01Rik	-	RIKEN cDNA 1600020E01 gene	ncRNA
common_peak1-9326-9-14--0.717277189204299-0.53895475198017	chr11	95096815	95097333	+	0	NA	Intergenic	Intergenic	-25769	NM_053093	93670	Mm.40085	NM_053093	ENSMUSG00000020872	Tac4	AW489379|PPT-C	tachykinin 4	protein-coding
common_peak2-22812-58-62-0.31867001139058-0.747189460713368	chr14	16242782	16244112	+	0	NA	intron (NM_146052, intron 1 of 1)	intron (NM_146052, intron 1 of 1)	28054	NM_146052	218763	Mm.138039	NM_146052	ENSMUSG00000045201	Lrrc3b	BC019794|LRP15	leucine rich repeat containing 3B	protein-coding
common_peak2-22104-19-35--0.767237674780626-1.06916698217164	chr12	80291173	80292317	+	0	NA	intron (NM_021557, intron 1 of 6)	intron (NM_021557, intron 1 of 6)	1061	NM_021557	17252	Mm.291799	NM_021557	ENSMUSG00000066441	Rdh11	2610319N22Rik|AI428145|AU045252|Arsdr1|C85936|CGI-82|HCBP12|M42C60|Mdt1|Psdr1|SCALD|UBE-1c1|Ube-1c	retinol dehydrogenase 11	protein-coding
unique_peak1-298-13-2-2.19350952991661-3.03832868024006	chr1	125519428	125519991	+	0	NA	intron (NM_199021, intron 5 of 25)	L1Md_T|LINE|L1	422427	NM_199021	269109	Mm.483255	NM_199021	ENSMUSG00000036815	Dpp10	6430601K09Rik|DPP X|Dprp3	dipeptidylpeptidase 10	protein-coding
common_peak1-11320-15-12-0.311725032414564-0.425539671739611	chr15	85523449	85524032	+	0	NA	Intergenic	Intergenic	-10463	NR_110483	102800312	Mm.33117	NR_110483		Mirlet7bhg	linc-Ppara	MIRLET7B host gene (non-protein coding)	ncRNA
common_peak1-18669-23-51--0.978672213632011-2.09593985174545	chr8	118284316	118285194	+	0	NA	Intergenic	Intergenic	-53961	NM_001025577	17132	Mm.275549	NM_001025577		Maf	2810401A20Rik|A230108G15Rik|AW047063|c-maf	avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog	protein-coding
common_peak2-23514-20-33--0.599388056659146-0.781990829058356	chr15	76710619	76711400	+	0	NA	intron (NM_145916, intron 1 of 4)	intron (NM_145916, intron 1 of 4)	1303	NM_145916	223669	Mm.38948	NM_145916	ENSMUSG00000033669	Zfp7	KRAB20|KRAB7|Krox-2|Zfp-7|Zfp65|Zfp80|Zfp86-rs1|mszf73-2	zinc finger protein 7	protein-coding
common_peak2-30064-47-72--0.25498313411347-0.498810849059171	chr6	128798923	128799982	+	0	NA	3' UTR (NM_001254946, exon 3 of 3)	3' UTR (NM_001254946, exon 3 of 3)	-23119	NM_030599	80782	Mm.6180	NM_030599	ENSMUSG00000079298	Klrb1b	Klrb1d|Ly55b|Ly55d|NKR-P1B|NKR-P1D|Nkrp1-b|Nkrp1d	killer cell lectin-like receptor subfamily B member 1B	protein-coding
unique_peak1-827-8-2-1.42025991722641-1.65811743852845	chr11	8468975	8469559	+	0	NA	intron (NM_001083587, intron 4 of 30)	intron (NM_001083587, intron 4 of 30)	95271	NM_001083587	319939	Mm.337820	NM_001083587	ENSMUSG00000020422	Tns3	BC023928|F830010I22Rik|TEM6|Tens1	tensin 3	protein-coding
unique_peak1-3000-7-1-1.79909083029819-1.80617997398389	chr17	83962386	83962867	+	0	NA	Intergenic	Intergenic	-48953	NM_001159529	20463	Mm.30072	NM_009187	ENSMUSG00000024248	Cox7a2l	COX7AR|COX7RP|EB1|SIG-81|SIG81|Silg81	cytochrome c oxidase subunit VIIa polypeptide 2-like	protein-coding
unique_peak2-36885-3-5--0.998945590680433-0.96108193396963	chr3	95293229	95293630	+	0	NA	intron (NM_001037737, intron 14 of 21)	intron (NM_001037737, intron 14 of 21)	-9703	NM_007802	13038	Mm.272085	NM_007802	ENSMUSG00000028111	Ctsk	AI323530|MMS10-Q|Ms10q|catK	cathepsin K	protein-coding
unique_peak2-35932-8-8--0.164702583494742-1.00793137938329	chr19	7498603	7499144	+	0	NA	3' UTR (NM_175381, exon 5 of 5)	3' UTR (NM_175381, exon 5 of 5)	1810	NR_105957	102466781		NR_105957		Mir6991	mmu-mir-6991	microRNA mir-6991	ncRNA
common_peak2-26640-21-44--0.922363831063439-1.59745120326141	chr2	119547193	119548582	+	0	NA	intron (NM_030112, intron 8 of 17)	intron (NM_030112, intron 8 of 17)	-20186	NM_146125	228550	Mm.65337	NM_146125	ENSMUSG00000027296	Itpka	-	inositol 1,4,5-trisphosphate 3-kinase A	protein-coding
unique_peak2-39185-3-7--1.41398308995928-1.23214870625617	chr8	95431189	95431582	+	0	NA	intron (NM_173014, intron 11 of 13)	intron (NM_173014, intron 11 of 13)	6091	NM_027112	69543	Mm.440514	NM_027112	ENSMUSG00000078144	Capns2	2310005G05Rik|30K-2	calpain, small subunit 2	protein-coding
common_peak1-12561-28-12-1.35251940168037-2.51395164919446	chr18	9516925	9518393	+	0	NA	Intergenic	Intergenic	-67511	NM_026484	67974	Mm.86523	NM_026484	ENSMUSG00000024286	Ccny	1700025H17Rik|3110050L10Rik|4631402G10Rik|5730405I09Rik	cyclin Y	protein-coding
unique_peak1-3615-36-12-1.77888136802666-4.71961104764085	chr19	34211597	34213424	+	0	NA	intron (NM_024204, intron 2 of 5)	IAPLTR1a_Mm|LTR|ERVK	28021	NM_024204	52024	Mm.183030	NM_024204	ENSMUSG00000024774	Ankrd22	5430429D21Rik|D19Ertd675e	ankyrin repeat domain 22	protein-coding
unique_peak2-35215-3-5--0.998945590680433-0.96108193396963	chr16	90845493	90845881	+	0	NA	intron (NM_001199210, intron 1 of 7)	intron (NM_001199210, intron 1 of 7)	14583	NM_001199210	70967	Mm.253077	NM_027627		Eva1c	1700092M14Rik|4931408A02Rik|Fam176c	eva-1 homolog C (C. elegans)	protein-coding
unique_peak1-3854-8-1-2.00522241794757-2.05605744720049	chr2	6083527	6084068	+	0	NA	Intergenic	Intergenic	29868	NR_033471	100038358	Mm.353975	NR_033470		Gm10857	AU015850|ENSMUSG00000075545	predicted gene 10857	ncRNA
unique_peak1-4628-13-10-0.319040412000471-0.446472590016315	chr3	83862875	83863480	+	0	NA	Intergenic	Intergenic	-19094	NM_172681	229473	Mm.28838	NM_172681	ENSMUSG00000033767	D930015E06Rik	Kiaa0922|mKIAA0922	RIKEN cDNA D930015E06 gene	protein-coding
unique_peak2-33308-7-10--0.660340788339108-1.12966497611638	chr11	5555783	5556364	+	0	NA	intron (NM_023816, intron 23 of 26)	L1_Mus2|LINE|L1	51629	NM_026080	64660	Mm.7328	NM_026080	ENSMUSG00000020477	Mrps24	3110030K20Rik|AI414579|Rpms24	mitochondrial ribosomal protein S24	protein-coding
common_peak2-22773-45-45-0.336796069287859-0.658272150962117	chr14	25475602	25477162	+	0	NA	Intergenic	Intergenic	166479	NM_011297	20088	Mm.16775	NM_011297	ENSMUSG00000025290	Rps24	-	ribosomal protein S24	protein-coding
unique_peak1-4553-9-1-2.18961340640422-2.31132995230379	chr3	41374300	41374821	+	0	NA	intron (NM_001130186, intron 1 of 10)	intron (NM_001130186, intron 1 of 10)	5758	NM_001130186	269424	Mm.286285	NM_172303	ENSMUSG00000025764	Jade1	AU041499|D530048A03Rik|Phf17|mKIAA1807	jade family PHD finger 1	protein-coding
unique_peak1-5463-8-3-1.00522241794757-1.39487600375387	chr5	123662183	123662735	+	0	NA	Intergenic	MERVL-int|LTR|ERVL	-15740	NM_026000	67151	Mm.278997	NM_026000	ENSMUSG00000029440	Psmd9	1500011J20Rik|2610202L11Rik|Bridge-1|P27	proteasome (prosome, macropain) 26S subunit, non-ATPase, 9	protein-coding
unique_peak2-34488-3-4--0.73591118484664-0.864171920961574	chr14	40995608	40996037	+	0	NA	Intergenic	L1Md_F2|LINE|L1	526871	NR_045936	73591	Mm.65499	NR_045936		1700109I08Rik	-	RIKEN cDNA 1700109I08 gene	ncRNA
common_peak1-17682-9-8-0.0196884049619079-1.03275496310833	chr7	66477322	66477913	+	0	NA	Intergenic	L1_Rod|LINE|L1	-6503	NM_173010	22215	Mm.9002	NM_011668	ENSMUSG00000025326	Ube3a	4732496B02|5830462N02Rik|A130086L21Rik|Hpve6a|mKIAA4216	ubiquitin protein ligase E3A	protein-coding
unique_peak2-36456-2-5--1.50241675698448-1.08602067057793	chr2	140896159	140896576	+	0	NA	intron (NM_001013802, intron 5 of 18)	intron (NM_001013802, intron 5 of 18)	-399155	NM_178382	71436	Mm.426781	NM_178382	ENSMUSG00000051379	Flrt3	5530600M07Rik|C430047I10Rik|mKIAA1469	fibronectin leucine rich transmembrane protein 3	protein-coding
common_peak1-16578-9-5-0.604650905683064-1.21398586181642	chr5	146963712	146964239	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	32905	NM_001008547	69282	Mm.373573	NM_001008547	ENSMUSG00000095040	1700001J03Rik	-	RIKEN cDNA 1700001J03 gene	protein-coding
unique_peak1-3844-11-2-1.92373108353046-2.32232533660526	chr2	4736582	4737120	+	0	NA	Intergenic	Intergenic	-65759	NM_175400	109079	Mm.34329	NM_175400	ENSMUSG00000026662	Sephs1	1110046B24Rik|AA589574|AI505014|AW111620|SELD|SPS|SPS1	selenophosphate synthetase 1	protein-coding
unique_peak1-4995-12-6-0.841421063030034-1.58711810488664	chr4	117135964	117136737	+	0	NA	intron (NM_025739, intron 2 of 14)	intron (NM_025739, intron 2 of 14)	33170	NM_025739	66743	Mm.318331	NM_025739	ENSMUSG00000028677	Rnf220	4732477A13|4931406I20Rik|5730503K05Rik|AV302541	ring finger protein 220	protein-coding
common_peak1-15553-28-24-0.409102930046738-0.610902792227729	chr4	123572447	123573682	+	0	NA	Intergenic	Intergenic	-9192	NM_019660	56309	Mm.446553	NM_019660	ENSMUSG00000028647	Mycbp	5730488M09Rik|AW552132|AW742590|Amy-1	c-myc binding protein	protein-coding
unique_peak2-38979-2-4--1.23938235115068-0.931118710592187	chr8	40594762	40595048	+	0	NA	Intergenic	Lx8|LINE|L1	133127	NM_031195	20288	Mm.239291	NM_031195	ENSMUSG00000025044	Msr1	MRS-A|MSR|MSR-A|SR-AI|SR-AII|Scara1|Scvr	macrophage scavenger receptor 1	protein-coding
common_peak1-11069-27-29-0.0846553552867171-0.333081040816753	chr15	58214976	58215994	+	0	NA	intron (NM_027211, intron 1 of 8)	intron (NM_027211, intron 1 of 8)	5344	NM_027211	69787	Mm.237985	NM_027211		Anxa13	1810034H17Rik|AV055219	annexin A13	protein-coding
common_peak2-31504-17-14-0.311405742596519-0.466170754204149	chr8	107254432	107255117	+	0	NA	Intergenic	Intergenic	-3129	NM_001190330	102022	Mm.212983	NM_133960	ENSMUSG00000055730	Ces2a	9130231C15Rik|AI266984|Ces6	carboxylesterase 2A	protein-coding
common_peak1-9068-8-7-0.00522241794757061-1.00793137938329	chr11	69095796	69096296	+	0	NA	Intergenic	Lx3_Mus|LINE|L1	41329	NM_172560	216846	Mm.28774	NM_172560	ENSMUSG00000032782	Cntrob	9830165K03Rik|Lip8	centrobin, centrosomal BRCA2 interacting protein	protein-coding
common_peak2-26739-10-6-0.549060422951165-1.21398586181642	chr2	132099689	132100122	+	0	NA	intron (NM_138651, intron 1 of 12)	B1_Mur3|SINE|Alu	11021	NM_138651	110911	Mm.284503	NM_138651	ENSMUSG00000058793	Cds2	5730450N06Rik|5730460C18Rik|AI854580|D2Wsu127e	CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2	protein-coding
common_peak1-19383-10-41--2.03590207776999-4.69161891904142	chrX	38564534	38565046	+	0	NA	Intergenic	(TA)n|Simple_repeat|Simple_repeat	-189688	NM_016886	53623	Mm.327681	NM_016886	ENSMUSG00000001986	Gria3	2900064I19Rik|GluA3|GluR-C|GluR-K3|Glur-3|Glur3|Gluralpha3	glutamate receptor, ionotropic, AMPA3 (alpha 3)	protein-coding
common_peak2-30383-8-12--0.695217300193522-0.475924844171029	chr7	29504889	29505404	+	0	NA	intron (NM_015796, intron 1 of 6)	intron (NM_015796, intron 1 of 6)	3337	NM_015796	50760	Mm.358659	NM_015796	ENSMUSG00000030598	Fbxo17	Fbg4|Fbx17|Fbxo26	F-box protein 17	protein-coding
unique_peak2-35329-5-7--0.704380336005853-1.01466476204226	chr17	22424202	22424630	+	0	NA	Intergenic	MMSAT4|Satellite|Satellite	-61835	NM_001205095	240038	Mm.227945	NM_001205095	ENSMUSG00000096433	Gm4944	EG240038	predicted gene 4944	protein-coding
common_peak2-26191-13-8-0.608547029195456-0.660903317613904	chr2	25271956	25272332	+	0	NA	Intergenic	MamGypLTR2c|LTR|Gypsy	-6618	NM_001289453	14347	Mm.1203	NM_013524	ENSMUSG00000036587	Fut7	AI853193|FTVII|Fuc-TVII|FucT-VII	fucosyltransferase 7	protein-coding
common_peak1-16593-23-17-0.551842503066768-0.713114929964887	chr5	149014967	149015944	+	0	NA	intron (NM_029920, intron 4 of 14)	intron (NM_029920, intron 4 of 14)	196025	NM_007513	11987	Mm.275489	NM_007513	ENSMUSG00000041313	Slc7a1	4831426K01Rik|AI447493|Atrc-1|Atrc1|Cat1|Rec-1|Rev-1|mCAT-1	solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	protein-coding
unique_peak2-38378-2-20--3.30977167904208-4.01305082679061	chr7	14622921	14623576	+	0	NA	Intergenic	Lx3C|LINE|L1	-48311	NM_001101534	434121	Mm.482762	NM_001101534	ENSMUSG00000074377	Sult2a4	EG434121|Gm5584	sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 4	protein-coding
common_peak1-17904-107-148-0.134878412211235-0.479280267348099	chr7	122969379	122971077	+	0	NA	intron (NM_001025559, intron 2 of 15)	intron (NM_001025559, intron 2 of 15)	-2004	NM_001277327	20679	Mm.323365	NM_011445	ENSMUSG00000051910	Sox6	AI987981|SOX-LZ	SRY (sex determining region Y)-box 6	protein-coding
common_peak2-21353-10-10--0.103016273628528-0.301029995663987	chr11	77807693	77808310	+	0	NA	intron (NM_174852, intron 2 of 14)	B3|SINE|B2	11683	NM_174852	268448	Mm.274329	NM_174852	ENSMUSG00000037791	Phf12	2410142K10Rik|F630045O13|PF1|mKIAA1523	PHD finger protein 12	protein-coding
common_peak1-8079-47-45-0.411279468709535-0.827470873527618	chr1	179041322	179042860	+	0	NA	intron (NM_011785, intron 2 of 12)	intron (NM_011785, intron 2 of 12)	136807	NM_011785	23797	Mm.235194	NM_011785	ENSMUSG00000019699	Akt3	AI851531|D930002M15Rik|Nmf350	thymoma viral proto-oncogene 3	protein-coding
common_peak1-8865-8-5-0.420259917226415-1.10484139239135	chr11	33860334	33860754	+	0	NA	intron (NM_001190886, intron 1 of 7)	MLT1G3|LTR|MaLR	-2469	NM_031169	16533	Mm.6206	NM_031169	ENSMUSG00000020155	Kcnmb1	BKbeta1	potassium large conductance calcium-activated channel, subfamily M, beta member 1	protein-coding
common_peak1-10825-8-10--0.454209200689727-1.078512453669	chr14	101794284	101794797	+	0	NA	Intergenic	Intergenic	-195254	NM_029680	76627	Mm.31415	NM_029680	ENSMUSG00000042888	Prr30	1700110M21Rik	proline rich 30	protein-coding
common_peak2-22922-8-6-0.197867495889966-1.03789460276074	chr14	46517520	46517940	+	0	NA	Intergenic	Lx7|LINE|L1	-185972	NR_002875	218963	Mm.282093	NR_002875		Gm1821	-	ubiquitin pseudogene	pseudo
unique_peak1-1100-8-0-3.00522241794757-2.70926996097583	chr11	89107548	89108105	+	0	NA	Intergenic	Intergenic	56047	NM_008711	18121	Mm.135266	NM_008711	ENSMUSG00000048616	Nog	-	noggin	protein-coding
unique_peak1-1837-17-7-1.21829633820504-1.55050753388977	chr14	41027455	41028172	+	0	NA	Intergenic	Lx2B|LINE|L1	558862	NR_045936	73591	Mm.65499	NR_045936		1700109I08Rik	-	RIKEN cDNA 1700109I08 gene	ncRNA
common_peak1-13839-33-20-0.939020139746768-1.77675427888235	chr2	59676088	59677151	+	0	NA	intron (NM_001290659, intron 22 of 25)	intron (NM_001290659, intron 22 of 25)	44044	NM_001159636	72137	Mm.288734	NM_028118	ENSMUSG00000026988	Wdsub1	1700048E19Rik|2610014F08Rik	WD repeat, SAM and U-box domain containing 1	protein-coding
unique_peak2-34958-4-6--0.830815435910851-0.989110657569874	chr15	95803205	95803570	+	0	NA	3' UTR (NM_175344, exon 20 of 20)	3' UTR (NM_175344, exon 20 of 20)	106596	NR_003627	402773	Mm.210567	NM_001033483		D030018L15Rik	-	nuclear receptor coactivator 2 pseudogene	pseudo
unique_peak2-33784-3-6--1.22133801201688-1.08602067057793	chr11	119793911	119794342	+	0	NA	Intergenic	ID_B1|SINE|B4	-10280	NM_001037754	108100	Mm.197534	NM_130862	ENSMUSG00000025372	Baiap2	IRSp53|R75030	brain-specific angiogenesis inhibitor 1-associated protein 2	protein-coding
unique_peak2-35168-13-44--1.71338106569191-3.8396563824121	chr16	35115613	35116928	+	0	NA	Intergenic	(TTTC)n|Simple_repeat|Simple_repeat	-39452	NM_001012765	224129	Mm.41137	NM_001012765		Adcy5	AW121902|Ac5	adenylate cyclase 5	protein-coding
common_peak1-14556-21-19-0.247561170378873-0.427564438475253	chr3	36066090	36066961	+	0	NA	3' UTR (NM_001101478, exon 4 of 4)	3' UTR (NM_001101478, exon 4 of 4)	16523	NM_001101478	241944	Mm.260056	NM_001101478	ENSMUSG00000033883	D3Ertd254e	-	DNA segment, Chr 3, ERATO Doi 254, expressed	protein-coding
common_peak2-26901-19-15-0.402687326661686-0.519193887192487	chr2	158510639	158511349	+	0	NA	intron (NM_001159662, intron 1 of 10)	intron (NM_001159662, intron 1 of 10)	18123	NM_001159662	228852	Mm.150540	NM_153089	ENSMUSG00000037754	Ppp1r16b	ANKRD4|C130078N17Rik|TIMAP|Wdt4	protein phosphatase 1, regulatory (inhibitor) subunit 16B	protein-coding
common_peak1-15804-22-15-0.647284105087405-0.849699271740893	chr5	8732505	8733266	+	0	NA	intron (NM_011076, intron 22 of 27)	intron (NM_011076, intron 22 of 27)	-65262	NM_011075	18669	Mm.146649	NM_011075	ENSMUSG00000028970	Abcb1b	Abcb1|Mdr1|Mdr1b|Pgy-1|Pgy1|mdr	ATP-binding cassette, sub-family B (MDR/TAP), member 1B	protein-coding
unique_peak1-1214-15-4-1.69023665566829-1.97518968347063	chr11	106674432	106675108	+	0	NA	intron (NM_177088, intron 12 of 19)	B4|SINE|B4	24204	NM_001166685	320162	Mm.30524	NM_177088	ENSMUSG00000018372	Cep95	4732496G21Rik|AI118346|AI448335|Ccdc45|D330027A14Rik|F630025I20Rik	centrosomal protein 95	protein-coding
common_peak2-22749-41-66--0.364940485609112-0.662566236663818	chr13	112463414	112464886	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-12236	NM_172593	218613	Mm.31012	NM_172593	ENSMUSG00000032727	Mier3	5730509D14|AU015422|D130064H19Rik	mesoderm induction early response 1, family member 3	protein-coding
common_peak2-21803-2-6--1.72480917832092-1.26211192963361	chr11	118400963	118401358	+	0	NA	intron (NM_001285436, intron 3 of 13)	intron (NM_001285436, intron 3 of 13)	62886	NM_172573	217364	Mm.473963	NM_172573	ENSMUSG00000033857	Engase	C130099A03|D230014K01Rik	endo-beta-N-acetylglucosaminidase	protein-coding
unique_peak2-39066-5-11--1.28934283672701-1.477227296591	chr8	71703151	71703723	+	0	NA	Intergenic	Intergenic	-29508	NM_001013379	234358	Mm.334577	NM_001013379		Zfp930	-	zinc finger protein 930	protein-coding
common_peak2-30119-7-7--0.200909169701811-0.97990265578305	chr6	136901021	136901413	+	0	NA	Intergenic	RMER17C|LTR|ERVK	-1827	NM_023898	78600	Mm.290622	NM_023898		Pde6h	A930033D18Rik|PDEgamma	phosphodiesterase 6H, cGMP-specific, cone, gamma	protein-coding
unique_peak2-34413-4-8--1.19338551529556-1.21878474469819	chr14	11811028	11811451	+	0	NA	intron (NM_010210, intron 2 of 8)	intron (NM_010210, intron 2 of 8)	183307	NM_010210	14198	Mm.397619	NM_010210	ENSMUSG00000060579	Fhit	AW045638|Fra14A2	fragile histidine triad gene	protein-coding
common_peak2-28448-23-23-0.136805003787924-0.340939137447793	chr4	150569191	150569984	+	0	NA	intron (NM_001081557, intron 6 of 23)	intron (NM_001081557, intron 6 of 23)	-137525	NM_009498	22319	Mm.273930	NM_009498	ENSMUSG00000028955	Vamp3	D130027G05Rik|VAMP-3|ceb	vesicle-associated membrane protein 3	protein-coding
common_peak1-19090-13-10-0.319040412000471-0.446472590016315	chr9	71663767	71664495	+	0	NA	Intergenic	Intergenic	-44722	NM_026599	68178	Mm.99961	NM_026599	ENSMUSG00000032232	Cgnl1	4933421H10Rik|9930020M10Rik|AI503810|Jacop	cingulin-like 1	protein-coding
unique_peak2-33609-7-5-0.214128329577033-1.01466476204226	chr11	94596247	94596599	+	0	NA	Intergenic	Intergenic	26073	NM_001105561	217122	Mm.24063	NM_183153		Gm11545	A430060F13Rik|C86086|OTTMUSG00000002043	predicted gene 11545	protein-coding
unique_peak1-1540-18-3-2.31291915122835-3.35694334496952	chr13	20174164	20175036	+	0	NA	Intergenic	Intergenic	-7776	NM_080288	140580	Mm.342392	NM_080288	ENSMUSG00000041112	Elmo1	6330578D22Rik|C230095H21Rik|CED-12	engulfment and cell motility 1	protein-coding
common_peak2-31626-26-24-0.284042902383738-0.446094173747083	chr8	123224385	123225447	+	0	NA	Intergenic	Intergenic	32696	NM_001293559	12857	Mm.386758	NM_009941	ENSMUSG00000031818	Cox4i1	AL024441|COX|COX IV-1|COXIV|Cox4|Cox4a|IV-1	cytochrome c oxidase subunit IV isoform 1	protein-coding
common_peak1-18936-30-61--0.784520900895002-1.71609131452352	chr9	45905683	45907022	+	0	NA	intron (NM_027498, intron 1 of 24)	intron (NM_027498, intron 1 of 24)	85449	NM_027498	70661	Mm.219459	NM_027498	ENSMUSG00000034135	Sik3	5730525O22Rik|9030204A07Rik|AI447252|AI846254|AI849445|Qsk|SIK-3|mKIAA0999	SIK family kinase 3	protein-coding
common_peak1-18462-17-35--0.951628663237274-1.34608670144205	chr8	84236448	84237278	+	0	NA	intron (NM_001297596, intron 2 of 24)	intron (NM_001297596, intron 2 of 24)	370402	NM_001297593	234515	Mm.324468	NM_001024617	ENSMUSG00000037940	Inpp4b	E130107I17Rik	inositol polyphosphate-4-phosphatase, type II	protein-coding
unique_peak1-1336-7-3-0.799090830298189-1.23214870625617	chr12	8856066	8856547	+	0	NA	Intergenic	Intergenic	-71807	NM_008640	17775	Mm.30071	NM_008640	ENSMUSG00000020585	Laptm4a	AA286466|LAPTM4|MTP|Mtrp|mKIAA0108	lysosomal-associated protein transmembrane 4A	protein-coding
common_peak2-19543-24-26-0.0383224006042484-0.317118655902073	chr1	160791982	160793218	+	0	NA	intron (NM_001085376, intron 3 of 21)	intron (NM_001085376, intron 3 of 21)	94969	NM_001085376	23850	Mm.458621	NM_001085376	ENSMUSG00000073530	Pappa2	PAPP-A2|PLAC3|Pappe	pappalysin 2	protein-coding
unique_peak1-5617-29-14-1.20539948500659-2.32006591355686	chr6	125467935	125469286	+	0	NA	Intergenic	Intergenic	-23837	NM_007657	12527	Mm.210676	NM_007657	ENSMUSG00000030342	Cd9	Tspan29	CD9 antigen	protein-coding
unique_peak2-36457-3-10--1.87341470859657-1.75805390616669	chr2	141371801	141372366	+	0	NA	intron (NM_001013802, intron 6 of 18)	intron (NM_001013802, intron 6 of 18)	-874871	NM_178382	71436	Mm.426781	NM_178382	ENSMUSG00000051379	Flrt3	5530600M07Rik|C430047I10Rik|mKIAA1469	fibronectin leucine rich transmembrane protein 3	protein-coding
common_peak2-27885-11-5-0.923731083530457-1.477227296591	chr4	126533229	126533653	+	0	NA	intron (NM_001035526, intron 22 of 23)	intron (NM_001035526, intron 22 of 23)	102427	NM_001035526	100317	Mm.206206	NM_133886	ENSMUSG00000028830	AU040320	A730047D20Rik|Kiaa0319l	expressed sequence AU040320	protein-coding
unique_peak2-36185-6-7--0.434601889619698-0.97990265578305	chr2	30594882	30595470	+	0	NA	Intergenic	Intergenic	18446	NR_037272	100526499		NR_037272	miRBase:MI0014082	Mir3089	mmu-mir-3089	microRNA 3089	ncRNA
unique_peak2-32840-9-11--0.395349094316936-0.344532117358383	chr1	193173403	193174076	+	0	NA	3' UTR (NM_025864, exon 8 of 8)	3' UTR (NM_025864, exon 8 of 8)	23895	NM_025864	66950	Mm.236300	NM_025864		Tmem206	2310028N02Rik|AI118576	transmembrane protein 206	protein-coding
unique_peak1-6370-10-10--0.103016273628528-0.301029995663987	chr7	67740982	67741582	+	0	NA	Intergenic	Intergenic	-456177	NM_001082962	20646	Mm.274995	NM_013670	ENSMUSG00000000948	Snrpn	2410045I01Rik|HCERN3|Peg4|Pwcr1|SMN	small nuclear ribonucleoprotein N	protein-coding
common_peak1-18506-21-11-0.984526764545079-1.3750876294627	chr8	87070640	87071381	+	0	NA	intron (NM_007578, intron 11 of 46)	intron (NM_007578, intron 11 of 46)	115741	NM_010499	15936	Mm.399	NM_010499	ENSMUSG00000053560	Ier2	AI317238|Ch1|Pip92	immediate early response 2	protein-coding
common_peak1-11664-11-12--0.191746133889479-0.310474156842889	chr16	25384540	25385132	+	0	NA	intron (NM_175165, intron 4 of 5)	intron (NM_175165, intron 4 of 5)	97933	NM_175165	71338	Mm.126851	NM_175165	ENSMUSG00000048399	Tprg	5430420C16Rik|Tprg1	transformation related protein 63 regulated	protein-coding
common_peak1-9276-10-23--1.22854715571239-1.44380006500971	chr11	87736654	87737233	+	0	NA	Intergenic	Intergenic	-8438	NM_146412	258407	Mm.271337	NM_146412	ENSMUSG00000060787	Olfr464	MOR240-2	olfactory receptor 464	protein-coding
unique_peak1-3014-12-0-3.64877598508764-4.21441993929574	chr17	86762275	86762888	+	0	NA	intron (NM_011104, intron 2 of 14)	intron (NM_011104, intron 2 of 14)	-76063	NR_045435	72104	Mm.443401	NR_045435		2010106C02Rik	-	RIKEN cDNA 2010106C02 gene	ncRNA
unique_peak2-39197-2-6--1.72480917832092-1.26211192963361	chr8	104534833	104535319	+	0	NA	Intergenic	Intergenic	773935	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
unique_peak2-35281-12-31--1.35122401491236-1.94790812833823	chr17	5975196	5976578	+	0	NA	intron (NM_001113352, intron 2 of 25)	intron (NM_001113352, intron 2 of 25)	301	NM_011523	20975	Mm.236068	NM_011523	ENSMUSG00000023805	Synj2	AI481647|SJ2|mKIAA0348	synaptojanin 2	protein-coding
common_peak1-13208-31-10-1.76580705217583-3.88430425937119	chr19	23967981	23969309	+	0	NA	intron (NM_177034, intron 2 of 12)	intron (NM_177034, intron 2 of 12)	135279	NM_177034	319924	Mm.22879	NM_177034	ENSMUSG00000024897	Apba1	6430513E09Rik|Lin-10|Mint|Mint1|Urop11|X11|X11alpha	amyloid beta (A4) precursor protein binding, family A, member 1	protein-coding
common_peak2-28042-55-67-0.117157029902363-0.376523540924376	chr4	57798207	57799715	+	0	NA	Intergenic	CT-rich|Low_complexity|Low_complexity	-59159	NM_009649	11641	Mm.467752	NM_009649	ENSMUSG00000038729	Akap2	AA959716|AI649048|Akap-2|Akap-kl|B230340M18Rik|Prka2	A kinase (PRKA) anchor protein 2	protein-coding
common_peak2-24844-7-8--0.370834171144123-1.00793137938329	chr17	74795804	74796297	+	0	NA	intron (NM_144798, intron 1 of 13)	B3A|SINE|B2	1102	NM_144798	210148	Mm.243943	NM_144798	ENSMUSG00000024069	Slc30a6	9530029F08Rik|ZnT6	solute carrier family 30 (zinc transporter), member 6	protein-coding
common_peak2-22808-38-90--0.936341980900166-3.12126071749017	chr14	14345530	14347180	+	0	NA	intron (NM_001163032, intron 2 of 4)	B2_Mm1t|SINE|B2	59883	NM_001163032	72003	Mm.317515	NM_028052	ENSMUSG00000056296	Synpr	1500003F20Rik|SPO	synaptoporin	protein-coding
common_peak2-27146-21-41--0.822828157512525-1.27781945862486	chr3	27938178	27939221	+	0	NA	exon (NM_001164056, exon 8 of 27)	exon (NM_001164056, exon 8 of 27)	55606	NM_008875	18805	Mm.212039	NM_008875	ENSMUSG00000027695	Pld1	AA536939|C85393|Pld1a|Pld1b	phospholipase D1	protein-coding
common_peak2-21199-33-28-0.473356567397957-0.763288167491247	chr11	60777216	60778281	+	0	NA	Intergenic	L1MA4|LINE|L1	32189	NM_008928	26397	Mm.18494	NM_008928	ENSMUSG00000018932	Map2k3	AW212142|MEK3|MKK3|Prkmk3|mMKK3b	mitogen-activated protein kinase kinase 3	protein-coding
unique_peak1-2039-10-0-3.35641534500877-3.31132995230379	chr15	25680146	25680626	+	0	NA	intron (NM_019472, intron 19 of 40)	B4A|SINE|B4	-92667	NM_001034851	66270	Mm.25311	NM_025459	ENSMUSG00000022270	Fam134b	1810015C04Rik|AU015349	family with sequence similarity 134, member B	protein-coding
unique_peak2-34097-2-7--1.91745425626332-1.45399745587252	chr13	13393734	13394258	+	0	NA	Intergenic	Lx6|LINE|L1	91895	NM_031999	83924	Mm.379269	NM_031999	ENSMUSG00000021306	Gpr137b	AI788917|AU016435|AW546472|C730041E01|C80550|C80741|D13Abb1e|Tm7sf1	G protein-coupled receptor 137B	protein-coding
unique_peak2-34486-6-9--0.75652998450706-1.11707584880836	chr14	40958722	40959165	+	0	NA	Intergenic	Lx|LINE|L1	489992	NR_045936	73591	Mm.65499	NR_045936		1700109I08Rik	-	RIKEN cDNA 1700109I08 gene	ncRNA
common_peak2-26848-18-16-0.225456309978012-0.397739447719379	chr2	154436464	154437154	+	0	NA	Intergenic	Intergenic	-2295	NM_199304	228807	Mm.103555	NM_199304	ENSMUSG00000059842	Zfp341	Znf341	zinc finger protein 341	protein-coding
common_peak2-19631-9-18--1.05831410703937-0.965105923112245	chr1	38987752	38988204	+	0	NA	Intergenic	Intergenic	-8016	NM_001011684	433292	Mm.333709	NM_001011684	ENSMUSG00000067604	Nms	AB164466	neuromedin S	protein-coding
unique_peak1-7390-8-2-1.42025991722641-1.65811743852845	chrX	101370785	101371344	+	0	NA	intron (NM_001077354, intron 1 of 4)	intron (NM_001077354, intron 1 of 4)	25392	NM_001077354	245555	Mm.381907	NM_001077354	ENSMUSG00000046449	C77370	A230051P11|C77386|Kiaa2022|Xpn|mKIAA2022	expressed sequence C77370	protein-coding
unique_peak2-35987-5-8--0.874305337448166-1.10484139239135	chr19	27219021	27219296	+	0	NA	Intergenic	Intergenic	-72352	NM_013703	22359	Mm.4141	NM_013703	ENSMUSG00000024924	Vldlr	AA408956|AI451093|AW047288	very low density lipoprotein receptor	protein-coding
common_peak2-22509-27-98--1.63781066918437-7.92724835619424	chr13	52980090	52982171	+	0	NA	intron (NM_016709, intron 6 of 9)	L1_Mus3|LINE|L1	43916	NM_016709	11992	Mm.252034	NM_016709	ENSMUSG00000021460	Auh	C77140|W91705	AU RNA binding protein/enoyl-coenzyme A hydratase	protein-coding
common_peak1-11831-16-3-2.11826364226806-2.65002542325363	chr16	79879868	79880544	+	0	NA	Intergenic	Lx3_Mus|LINE|L1	-788864	NM_178855	19146	Mm.5184	NM_008941	ENSMUSG00000022857	Tmprss15	Entk|Prss7	transmembrane protease, serine 15	protein-coding
unique_peak1-2970-18-5-1.7279566505072-2.39372960542229	chr17	73941842	73942841	+	0	NA	intron (NM_027864, intron 1 of 14)	intron (NM_027864, intron 1 of 14)	117450	NM_027864	71685	Mm.271953	NM_027864	ENSMUSG00000024064	Galnt14	0610033M06Rik	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14	protein-coding
common_peak2-19792-14-7-0.899216160357645-0.947446088118041	chr1	86497428	86497849	+	0	NA	Intergenic	Intergenic	997747	NM_030194	109032	Mm.335802	NM_030194	ENSMUSG00000070034	Sp110	5031415C07Rik|52kDa|5830484A20Rik|ENSMUSG00000075603|Ifi75|Ipr1	Sp110 nuclear body protein	protein-coding
unique_peak1-3812-11-2-1.92373108353046-2.32232533660526	chr2	147980060	147980620	+	0	NA	Intergenic	Intergenic	-107635	NM_010446	15376	Mm.938	NM_010446	ENSMUSG00000037025	Foxa2	HNF3-beta|HNF3beta|Hnf-3b|Hnf3b|Tcf-3b|Tcf3b	forkhead box A2	protein-coding
unique_peak1-6206-36-7-2.47932108616775-7.0326653011717	chr7	35143550	35144821	+	0	NA	intron (NM_025948, intron 4 of 10)	L1Md_F3|LINE|L1	30374	NM_025948	67070	Mm.276503	NM_025948	ENSMUSG00000066568	Lsm14a	2700023B17Rik|AA407828|AU017544|Tral	LSM14 homolog A (SCD6, S. cerevisiae)	protein-coding
common_peak1-13928-10-6-0.549060422951165-1.21398586181642	chr2	85036529	85037125	+	0	NA	promoter-TSS (NM_001033346)	promoter-TSS (NM_001033346)	29	NM_001033346	241528	Mm.291095	NM_001033346	ENSMUSG00000075224	Lrrc55	A330097E02Rik|Gm351	leucine rich repeat containing 55	protein-coding
unique_peak2-37299-8-13--0.802132504110034-0.562038191119711	chr4	120924488	120925199	+	0	NA	Intergenic	L1Md_T|LINE|L1	-63704	NM_001081013	109263	Mm.215745	NM_001081013	ENSMUSG00000049878	Rlf	9230110M18Rik|AI195322|MommeD8	rearranged L-myc fusion sequence	protein-coding
common_peak1-7729-15-11-0.4272022498345-0.503257505534083	chr1	88474066	88474714	+	0	NA	intron (NM_008801, intron 1 of 4)	intron (NM_008801, intron 1 of 4)	4686	NM_008801	18582	Mm.12925	NM_008801	ENSMUSG00000026239	Pde6d	AI841218|PrBP/delta	phosphodiesterase 6D, cGMP-specific, rod, delta	protein-coding
unique_peak1-3586-15-4-1.69023665566829-1.97518968347063	chr19	29647710	29648395	+	0	NA	intron (NM_001081319, intron 8 of 25)	intron (NM_001081319, intron 8 of 25)	51280	NM_001081319	226089	Mm.353838	NM_177641	ENSMUSG00000038658	Ric1	C030046E11Rik|C130057E09Rik|Kiaa1432	RAB6A GEF complex partner 1	protein-coding
common_peak2-28315-11-7-0.508693584251613-1.21681515183528	chr4	133406649	133407188	+	0	NA	exon (NM_001285506, exon 18 of 21)	exon (NM_001285506, exon 18 of 21)	23728	NM_001285506	20111	Mm.301827	NM_009097	ENSMUSG00000003644	Rps6ka1	Mapkapk-1a|Rsk|Rsk-1|Rsk1|S6K-alpha-1|p90-Rsk1|p90Rsk1|p90S6K|p90rsk	ribosomal protein S6 kinase polypeptide 1	protein-coding
common_peak1-9745-28-14-1.14606852421294-2.01759298435799	chr12	49394676	49395654	+	0	NA	Intergenic	Intergenic	-1088705	NM_001160112	15228	Mm.4704	NM_008241	ENSMUSG00000020950	Foxg1	2900064B05Rik|BF-1|Bf1|Hfh9|Hfhbf1	forkhead box G1	protein-coding
unique_peak2-38899-5-9--1.02630843089322-1.21398586181642	chr8	11557352	11557813	+	0	NA	intron (NM_011919, intron 1 of 1)	CpG	1516	NM_011919	26356	Mm.25709	NM_011919	ENSMUSG00000045969	Ing1	2610028J21Rik|AA407184|AI875420|mING1h|p33Ing1|p37Ing1b	inhibitor of growth family, member 1	protein-coding
unique_peak2-37801-2-7--1.91745425626332-1.45399745587252	chr5	123024777	123025266	+	0	NA	intron (NM_009879, intron 11 of 18)	B1_Mur4|SINE|Alu	39506	NM_009879	12589	Mm.10125	NM_009879	ENSMUSG00000029469	Ift81	AW060663|Cdv-1|Cdv-1r|Cdv1	intraflagellar transport 81	protein-coding
unique_peak1-2599-9-1-2.18961340640422-2.31132995230379	chr16	32698417	32698980	+	0	NA	Intergenic	Intergenic	25458	NM_001289443	51789	Mm.251115	NM_016788	ENSMUSG00000022791	Tnk2	Ack|Ack-1|Ack1|Cdgip|Pyk1	tyrosine kinase, non-receptor, 2	protein-coding
common_peak2-28052-11-19--0.813234510635749-0.769930178837768	chr4	59238620	59239267	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-33980	NR_105031	101055769	Mm.421401	NR_105031		LOC101055769	-	uncharacterized LOC101055769	ncRNA
unique_peak2-38760-8-23--1.57974008277359-1.94520747672513	chr7	120917750	120918398	+	0	NA	intron (NM_145584, intron 1 of 15)	intron (NM_145584, intron 1 of 15)	8562	NM_145584	233744	Mm.334160	NM_145584	ENSMUSG00000038156	Spon1	AI666765|AW455831|BC020531|D330035F22Rik|FSP	spondin 1, (f-spondin) extracellular matrix protein	protein-coding
unique_peak1-5751-9-3-1.18961340640422-1.57096726280955	chr6	50359101	50359771	+	0	NA	intron (NM_001163645, intron 2 of 21)	intron (NM_001163645, intron 2 of 21)	-26600	NM_027881	71720	Mm.44153	NM_027881	ENSMUSG00000029822	Osbpl3	1200014M06Rik|6720421I08Rik|A530055M08|ORP3|OSBP3	oxysterol binding protein-like 3	protein-coding
common_peak1-13290-15-11-0.4272022498345-0.503257505534083	chr19	38083215	38083898	+	0	NA	intron (NM_001099634, intron 3 of 52)	intron (NM_001099634, intron 3 of 52)	34511	NM_001099634	226101	Mm.34674	NM_177035	ENSMUSG00000048612	Myof	2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3	myoferlin	protein-coding
common_peak2-25129-18-35--0.857005850213961-1.20071330053878	chr18	39489015	39489988	+	0	NA	intron (NM_175164, intron 20 of 22)	RLTR31_Mm|LTR|ERVK	157398	NM_008173	14815	Mm.129481	NM_008173	ENSMUSG00000024431	Nr3c1	GR|Grl-1|Grl1	nuclear receptor subfamily 3, group C, member 1	protein-coding
common_peak2-23456-13-12-0.0780323124966764-0.334470287753051	chr15	67039648	67040191	+	0	NA	Intergenic	Intergenic	-18412	NR_045140	69334	Mm.63770	NR_045140		1700012I11Rik	-	RIKEN cDNA 1700012I11 gene	ncRNA
common_peak1-16613-14-24--0.74464002941708-0.756118839439549	chr5	151367753	151368554	+	0	NA	intron (NM_001081001, intron 24 of 26)	intron (NM_001081001, intron 24 of 26)	28947	NM_133898	100637	Mm.279932	NM_133898	ENSMUSG00000041132	N4bp2l1	2410024N18Rik|AI428195|B230342M21Rik	NEDD4 binding protein 2-like 1	protein-coding
unique_peak2-38121-11-20--0.883623838527147-0.876666802405043	chr6	82772712	82773708	+	0	NA	Intergenic	Intergenic	-48762	NM_013820	15277	Mm.255848	NM_013820	ENSMUSG00000000628	Hk2	AI642394|HKII	hexokinase 2	protein-coding
unique_peak2-32611-1-7--2.62705701021674-1.80617997398389	chr1	105443289	105443728	+	0	NA	Intergenic	L1Md_Gf|LINE|L1	-1221888	NM_011800	23836	Mm.103640	NM_011800	ENSMUSG00000050840	Cdh20	Cdh7	cadherin 20	protein-coding
unique_peak2-38823-2-5--1.50241675698448-1.08602067057793	chr7	141010391	141010874	+	0	NA	intron (NM_025850, intron 1 of 10)	L1MA6|LINE|L1	-36164	NM_001286031	101437	Mm.199223	NM_133941	ENSMUSG00000030986	Dhx32	3110079L04Rik|4732469F02Rik|AA408140|Ddx32	DEAH (Asp-Glu-Ala-His) box polypeptide 32	protein-coding
unique_peak2-35386-6-5--0.0195643903408542-0.947717972411649	chr17	29652633	29652970	+	0	NA	Intergenic	B2_Mm2|SINE|B2	24811	NM_008842	18712	Mm.405293	NM_008842		Pim1	Pim-1	proviral integration site 1	protein-coding
common_peak2-29692-9-18--1.05831410703937-0.965105923112245	chr6	73222850	73223334	+	0	NA	intron (NM_019879, intron 7 of 8)	ORR1E|LTR|MaLR	24593	NM_019879	56451	Mm.29845	NM_019879	ENSMUSG00000052738	Suclg1	1500000I01Rik|Sucla1	succinate-CoA ligase, GDP-forming, alpha subunit	protein-coding
unique_peak1-2934-8-3-1.00522241794757-1.39487600375387	chr17	56265932	56266326	+	0	NA	intron (NM_013662, intron 12 of 16)	intron (NM_013662, intron 12 of 16)	-4760	NM_029796	76905	Mm.348025	NM_029796	ENSMUSG00000037095	Lrg1	1300008B03Rik|2310031E04Rik|Lrg|Lrhg	leucine-rich alpha-2-glycoprotein 1	protein-coding
unique_peak2-38934-3-9--1.73591118484664-1.57096726280955	chr8	23237220	23237765	+	0	NA	Intergenic	Intergenic	-1967	NM_177898	330721	Mm.113940	NM_177898	ENSMUSG00000037738	Nek5	6530411J22|BB049667	NIMA (never in mitosis gene a)-related expressed kinase 5	protein-coding
common_peak2-25904-66-91--0.00507829163117179-0.302216598514508	chr19	45997884	45998769	+	0	NA	intron (NM_198296, intron 19 of 25)	intron (NM_198296, intron 19 of 25)	74652	NM_198296	71617	Mm.210949	NM_198296	ENSMUSG00000039901	9130011E15Rik	AI431055|AW050122	RIKEN cDNA 9130011E15 gene	protein-coding
common_peak2-31766-15-9-0.690236655668294-0.732381977911291	chr9	21593028	21593636	+	0	NA	intron (NM_145611, intron 3 of 11)	intron (NM_145611, intron 3 of 11)	9658	NM_145611	235041	Mm.257371	NM_145611	ENSMUSG00000032194	Kank2	AI504612|Ankrd25|BC010245	KN motif and ankyrin repeat domains 2	protein-coding
common_peak2-21583-112-108-0.665065975543357-3.59572431778745	chr11	98026244	98027658	+	0	NA	intron (NM_001080118, intron 13 of 16)	B2_Mm2|SINE|B2	-16021	NM_028149	72194	Mm.218350	NM_028149	ENSMUSG00000020883	Fbxl20	2610511F20Rik|4632423N09Rik|AI849362|AL117906|C86145|Fbl2|Scr|mKIAA4147	F-box and leucine-rich repeat protein 20	protein-coding
unique_peak1-3643-9-3-1.18961340640422-1.57096726280955	chr19	38486067	38486619	+	0	NA	Intergenic	ORR1A4|LTR|MaLR	15873	NM_175507	240660	Mm.262085	NM_175507	ENSMUSG00000044026	Slc35g1	AA590464|D330039I19Rik|Tmem20	solute carrier family 35, member G1	protein-coding
unique_peak1-6852-8-3-1.00522241794757-1.39487600375387	chr8	84774845	84775422	+	0	NA	Intergenic	Intergenic	151352	NM_001254747	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
unique_peak1-7220-9-5-0.604650905683064-1.21398586181642	chr9	70421131	70421628	+	0	NA	exon (NM_025690, exon 7 of 21)	exon (NM_025690, exon 7 of 21)	30702	NM_025690	66660	Mm.22379	NM_025690	ENSMUSG00000032212	Sltm	5730455C01Rik|5730555F13Rik|9130215G10Rik|Met	SAFB-like, transcription modulator	protein-coding
common_peak2-31496-13-10-0.319040412000471-0.446472590016315	chr8	106738117	106738632	+	0	NA	intron (NM_001141925, intron 3 of 4)	intron (NM_001141925, intron 3 of 4)	34084	NR_045642	57813	Mm.183110	NM_021028	ENSMUSG00000035824	Tk2	AU024611|mt-TK	thymidine kinase 2, mitochondrial	protein-coding
common_peak2-30147-12-12--0.0516637330534535-0.309718203022949	chr6	145792521	145793133	+	0	NA	Intergenic	L1Md_F2|LINE|L1	21113	NM_001271768	79362	Mm.154529	NM_024469	ENSMUSG00000030256	Bhlhe41	6430520M22Rik|Bhlhb2l|Bhlhb3|DEC2|Sharp1	basic helix-loop-helix family, member e41	protein-coding
unique_peak2-37290-4-5--0.608423014574403-0.909929411522249	chr4	118430044	118430412	+	0	NA	Intergenic	Intergenic	-3087	NM_207152	258259	Mm.377398	NM_207152	ENSMUSG00000095218	Olfr1338	MOR259-4P|MOR259-9|Olfr1524-ps1	olfactory receptor 1338	protein-coding
unique_peak2-37469-5-11--1.28934283672701-1.477227296591	chr5	3149809	3150376	+	0	NA	Intergenic	Intergenic	-194220	NM_009873	12571	Mm.31672	NM_009873	ENSMUSG00000040274	Cdk6	5830411I20|AI504062|Crk2	cyclin-dependent kinase 6	protein-coding
common_peak2-32345-36-74--0.749497604328126-1.85122145394931	chrX	77510257	77512361	+	0	NA	Intergenic	Intergenic	-594535	NM_028025	71967	Mm.379207	NM_028025	ENSMUSG00000046942	Mageb16	2410003J06Rik	melanoma antigen family B, 16	protein-coding
common_peak2-21247-10-12--0.344024373132323-0.340565874754526	chr11	69039690	69040267	+	0	NA	intron (NM_008192, intron 11 of 18)	ID_B1|SINE|B4	10546	NM_008192	14919	Mm.291816	NM_008192	ENSMUSG00000020890	Gucy2e	GC-E|GC1|ROS-GC1	guanylate cyclase 2e	protein-coding
unique_peak2-39652-0-6--3.64748585253182-1.56314192529759	chr9	106453347	106453704	+	0	NA	intron (NM_026645, intron 6 of 7)	B3|SINE|B2	10431	NM_026645	68265	Mm.141451	NM_026645	ENSMUSG00000023577	Iqcf3	1700012F17Rik|AV040440	IQ motif containing F3	protein-coding
common_peak2-22933-19-27--0.404667595395917-0.464317215211849	chr14	47276873	47277616	+	0	NA	Intergenic	(CAGAGA)n|Simple_repeat|Simple_repeat	-20146	NR_046460	74458	Mm.390708	NR_046460		4933425B07Rik	-	RIKEN cDNA 4933425B07 gene	ncRNA
unique_peak1-5790-13-6-0.971117108580164-1.01572999746118	chr6	58640301	58640971	+	0	NA	intron (NM_011920, intron 15 of 15)	intron (NM_011920, intron 15 of 15)	93970	NM_011920	26357	Mm.333096	NM_011920	ENSMUSG00000029802	Abcg2	ABC15|ABCP|AI428558|BCRP|Bcrp1|MXR|MXR1	ATP-binding cassette, sub-family G (WHITE), member 2	protein-coding
common_peak1-18474-31-11-1.64027617009197-3.52967372072617	chr8	84749405	84750511	+	0	NA	Intergenic	Intergenic	176527	NM_001254747	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak1-17225-9-4-0.867685311516858-1.36011389749466	chr6	126487355	126487953	+	0	NA	Intergenic	Intergenic	-2081	NM_145983	16493	Mm.222831	NM_145983		Kcna5	Kv1.5	potassium voltage-gated channel, shaker-related subfamily, member 5	protein-coding
unique_peak1-5161-12-6-0.841421063030034-1.58711810488664	chr5	24827398	24828011	+	0	NA	intron (NM_001081383, intron 33 of 58)	L1_Mus1|LINE|L1	98993	NM_144908	231050	Mm.246718	NM_144908	ENSMUSG00000038072	Galnt11	A430075I06Rik|AI648252|E430002F06Rik	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11	protein-coding
common_peak2-28154-53-76--0.125813528278973-0.33796692268184	chr4	106847419	106849210	+	0	NA	intron (NM_025617, intron 2 of 4)	tRNA-Ala-GCA|tRNA|tRNA	2657	NM_025617	66526	Mm.246956	NM_025617	ENSMUSG00000028619	Tceanc2	2210010B22Rik|2210012G02Rik|6330404A07Rik|AU015593|Tdeanc2	transcription elongation factor A (SII) N-terminal and central domain containing 2	protein-coding
unique_peak1-2172-7-3-0.799090830298189-1.23214870625617	chr15	61522052	61522563	+	0	NA	Intergenic	Intergenic	83699	NR_040350	432956	Mm.404918	NR_040350		D030024E09Rik	-	RIKEN cDNA D030024E09 gene	ncRNA
unique_peak1-573-12-2-2.06381348436648-2.79529063155376	chr10	111378033	111378617	+	0	NA	Intergenic	Intergenic	-31426	NM_178610	52705	Mm.34606	NM_178610	ENSMUSG00000063334	Krr1	2610511F02Rik|AI255219|AI428520|D10Ertd773e|Hrb2	KRR1, small subunit (SSU) processome component, homolog (yeast)	protein-coding
common_peak1-14034-8-4-0.683294323060208-1.21878474469819	chr2	117461859	117462363	+	0	NA	Intergenic	Intergenic	-185553	NR_040631	73938	Mm.399107	NR_040631	ENSMUSG00000086221	4930412B13Rik	-	RIKEN cDNA 4930412B13 gene	ncRNA
common_peak1-10805-33-36-0.121884196896579-0.346766333527252	chr14	78848642	78849840	+	0	NA	Intergenic	Intergenic	87426	NM_001164503	219181	Mm.89413	NM_001164503	ENSMUSG00000022016	Akap11	6330501D17Rik|AKAP220|Gm80|PRKA11|mKIAA0629	A kinase (PRKA) anchor protein 11	protein-coding
common_peak1-14048-58-58-0.413306885528655-1.00278553979691	chr2	119173820	119175773	+	0	NA	Intergenic	Intergenic	-2182	NM_026929	69065	Mm.35083	NM_026929	ENSMUSG00000027313	Chac1	1810008K03Rik	ChaC, cation transport regulator 1	protein-coding
unique_peak2-33918-3-5--0.998945590680433-0.96108193396963	chr12	69446558	69446930	+	0	NA	Intergenic	Lx3B|LINE|L1	-676486	NR_033146	100316870	Mm.379794	NR_033146		Gm17821	-	DDB1 and CUL4 associated factor 5 pseudogene	pseudo
unique_peak1-4729-16-5-1.53330114154691-1.80287260729378	chr3	106831188	106832072	+	0	NA	Intergenic	Intergenic	-7450	NM_008418	16491	Mm.30640	NM_008418	ENSMUSG00000047959	Kcna3	Kca1-3|Kv1.3|Mk-3	potassium voltage-gated channel, shaker-related subfamily, member 3	protein-coding
unique_peak1-881-11-5-0.923731083530457-1.477227296591	chr11	32224418	32224954	+	0	NA	Intergenic	RMER17A2|LTR|ERVK	-23125	NM_177364	268396	Mm.227616	NM_177364	ENSMUSG00000040711	Sh3pxd2b	G431001E03Rik|TSK4|fad49	SH3 and PX domains 2B	protein-coding
unique_peak1-3257-10-0-3.35641534500877-3.31132995230379	chr18	65519782	65520293	+	0	NA	intron (NM_001037294, intron 3 of 12)	L2a|LINE|L2	33505	NM_001037294	225638	Mm.296528	NM_001037294	ENSMUSG00000032845	Alpk2	Gm549|Hak	alpha-kinase 2	protein-coding
unique_peak1-4054-8-4-0.683294323060208-1.21878474469819	chr2	60688888	60689375	+	0	NA	intron (NM_020296, intron 1 of 13)	intron (NM_020296, intron 1 of 13)	30364	NM_001141932	56878	Mm.259667	NM_020296	ENSMUSG00000026970	Rbms1	2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1	RNA binding motif, single stranded interacting protein 1	protein-coding
unique_peak1-3128-9-3-1.18961340640422-1.57096726280955	chr18	36315665	36316114	+	0	NA	intron (NM_001167891, intron 1 of 9)	MLT1D|LTR|MaLR	40925	NM_001167891	100042150	Mm.380390	NM_001167891	ENSMUSG00000060275	Nrg2	Don1|NTAK	neuregulin 2	protein-coding
common_peak1-7499-62-90--0.0970431813966117-0.332055252013198	chr1	13372442	13374402	+	0	NA	Intergenic	Intergenic	-9258	NM_008678	17978	Mm.2537	NM_008678	ENSMUSG00000005886	Ncoa2	9530095N19|D1Ertd433e|GRIP-1|Grip1|KAT13C|SRC-2|TIF-2|TIF2|bHLHe75	nuclear receptor coactivator 2	protein-coding
unique_peak2-38737-4-5--0.608423014574403-0.909929411522249	chr7	113169021	113169430	+	0	NA	Intergenic	Intergenic	52153	NR_030720	668128	Mm.484022	NR_030720		Gm8989	EG668128|Gm21911	very large inducible GTPase 1 pseudogene	pseudo
common_peak2-24801-42-35-0.572404326424872-1.18863360106102	chr17	66352504	66354012	+	0	NA	intron (NM_001025572, intron 8 of 12)	intron (NM_001025572, intron 8 of 12)	-52731	NM_023053	65960	Mm.10153	NM_023053	ENSMUSG00000024098	Twsg1	1810013J15Rik|9030422N06Rik|AW552143|D17Ertd403e|Tsg|Twg	twisted gastrulation homolog 1 (Drosophila)	protein-coding
unique_peak2-35789-9-33--1.89784943484612-3.46696221776358	chr18	56505148	56506488	+	0	NA	Intergenic	ORR1A3|LTR|MaLR	-85968	NM_026240	107022	Mm.24356	NM_026240	ENSMUSG00000001700	Gramd3	9030613F08Rik|9130427A09Rik|AW061306|NS3TP2	GRAM domain containing 3	protein-coding
common_peak1-14282-39-53--0.139126255244315-0.335101043913478	chr2	157278775	157279775	+	0	NA	intron (NM_001025395, intron 2 of 13)	B3|SINE|B2	29246	NM_001025395	20779	Mm.22845	NM_009271	ENSMUSG00000027646	Src	AW259666|pp60c-src	Rous sarcoma oncogene	protein-coding
common_peak1-9422-29-42--0.313974674086987-0.439405572480898	chr11	101315584	101316823	+	0	NA	intron (NM_027320, intron 1 of 6)	intron (NM_027320, intron 1 of 6)	6477	NM_027320	70110	Mm.45558	NM_027320	ENSMUSG00000010358	Ifi35	2010008K16Rik|AW986054|IFP35|ifi-35	interferon-induced protein 35	protein-coding
common_peak2-29507-9-8-0.0196884049619079-1.03275496310833	chr6	34351265	34351690	+	0	NA	Intergenic	Intergenic	-10885	NM_009731	11997	Mm.482073	NM_009731	ENSMUSG00000052131	Akr1b7	AR|Avdp|MVDP	aldo-keto reductase family 1, member B7	protein-coding
common_peak1-14463-8-8--0.164702583494742-1.00793137938329	chr3	83869519	83869989	+	0	NA	Intergenic	Intergenic	-25671	NM_172681	229473	Mm.28838	NM_172681	ENSMUSG00000033767	D930015E06Rik	Kiaa0922|mKIAA0922	RIKEN cDNA D930015E06 gene	protein-coding
common_peak2-26128-43-82--0.592476245823222-1.46410551884986	chr2	6871871	6873032	+	0	NA	intron (NM_001110231, intron 4 of 15)	intron (NM_001110231, intron 4 of 15)	-22683	NR_027890	68144	Mm.483289	NM_026575		5031426D15Rik	-	RIKEN cDNA 5031426D15 gene	ncRNA
common_peak2-21858-23-36--0.48768586111987-0.652802052802678	chr12	3309228	3310044	+	0	NA	5' UTR (NM_016676, exon 1 of 6)	5' UTR (NM_016676, exon 1 of 6)	333	NM_016676	19325	Mm.378993	NM_016676	ENSMUSG00000020671	Rab10	AW107754	RAB10, member RAS oncogene family	protein-coding
common_peak1-14361-22-55--1.1600708169702-2.80467882841136	chr2	167348460	167349247	+	0	NA	Intergenic	MERVL-int|LTR|ERVL	-14874	NM_011427	20613	Mm.2093	NM_011427	ENSMUSG00000042821	Snai1	AI194338|Sna|Sna1|Snail|Snail1	snail family zinc finger 1	protein-coding
unique_peak1-424-15-9-0.690236655668294-0.732381977911291	chr1	161998925	161999720	+	0	NA	intron (NM_001162896, intron 1 of 2)	Lx9|LINE|L1	8727	NR_038030	75255	Mm.414845	NR_038030	ENSMUSG00000026729	4930562F07Rik	-	RIKEN cDNA 4930562F07 gene	ncRNA
common_peak1-12256-121-256--0.43825876731588-2.42967637705521	chr17	36270749	36272331	+	0	NA	Intergenic	RMER21A|LTR|ERV1	-5170	NM_001177467	630294	Mm.484916	NM_001177467	ENSMUSG00000092243	Gm7030	EG630294|H2-t9	predicted gene 7030	protein-coding
common_peak2-26130-6-4-0.24347001549294-0.989110657569874	chr2	9955774	9956105	+	0	NA	intron (NM_027748, intron 2 of 6)	intron (NM_027748, intron 2 of 6)	14297	NM_027748	209361	Mm.86343	NM_027748	ENSMUSG00000025782	Taf3	140kDa|4933439M23Rik|AW539625|TAF140|TAFII-140|TAFII140|mTAFII140	TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor	protein-coding
common_peak1-8575-61-108--0.385434995027586-1.01363328297312	chr10	98913465	98915146	+	0	NA	Intergenic	Intergenic	-157500	NR_038019	100504202	Mm.403801	NR_038019		Gm20110	-	predicted gene, 20110	ncRNA
common_peak2-27137-5-8--0.874305337448166-1.10484139239135	chr3	27607984	27608417	+	0	NA	intron (NM_173182, intron 1 of 25)	intron (NM_173182, intron 1 of 25)	1161	NM_173182	72007	Mm.38832	NM_173182	ENSMUSG00000039286	Fndc3b	1600019O04Rik|AW550168|Fad104|mKIAA4164	fibronectin type III domain containing 3B	protein-coding
common_peak1-16751-7-9--0.522837264589173-1.05908390183068	chr6	34176508	34176953	+	0	NA	Intergenic	Intergenic	-49676	NM_021435	58246	Mm.245527	NM_021435		Slc35b4	4930474D06Rik|AB041549|AW494345	solute carrier family 35, member B4	protein-coding
unique_peak2-39159-2-7--1.91745425626332-1.45399745587252	chr8	91377811	91378239	+	0	NA	Intergenic	Intergenic	157098	NM_001128171	74256	Mm.490395	NM_173369	ENSMUSG00000036712	Cyld	2010013M14Rik|2900009M21Rik|C130039D01Rik|CDMT|CYLD1|EAC|mKIAA0849	cylindromatosis (turban tumor syndrome)	protein-coding
unique_peak1-5013-9-2-1.60465090568306-1.87199725847353	chr4	124851553	124852058	+	0	NA	Intergenic	MER3|DNA|MER1_type	-46680	NM_153159	230738	Mm.402	NM_153159	ENSMUSG00000042677	Zc3h12a	BC036563|MCPIP|Mcpip1	zinc finger CCCH type containing 12A	protein-coding
common_peak1-8388-62-95--0.174211041919071-0.421729484740878	chr10	63022852	63023989	+	0	NA	intron (NM_001164376, intron 3 of 17)	L1Md_F3|LINE|L1	103161	NM_001164376	216033	Mm.444692	NM_177612	ENSMUSG00000060843	Ctnna3	4930429L08Rik|4933408A16|Catna3|Vr22	catenin (cadherin associated protein), alpha 3	protein-coding
common_peak1-13303-19-8-1.23276232521937-1.61268301619756	chr19	41384789	41385572	+	0	NA	intron (NM_031376, intron 8 of 16)	intron (NM_031376, intron 8 of 16)	-46686	NM_133352	107358	Mm.246440	NM_133352	ENSMUSG00000025016	Tm9sf3	1810073M23Rik|2810031D16Rik|AI115521|AI413748|AW146116|AW549777|Smbp|mKIAA4036	transmembrane 9 superfamily member 3	protein-coding
common_peak2-29191-13-15--0.221527969362231-0.308519316180257	chr5	135689108	135689810	+	0	NA	intron (NM_011714, intron 6 of 18)	intron (NM_011714, intron 6 of 18)	26266	NM_011714	22385	Mm.40331	NM_011714	ENSMUSG00000002748	Baz1b	C87820|WSTF|Wbscr9	bromodomain adjacent to zinc finger domain, 1B	protein-coding
common_peak1-8198-23-27--0.0855874175485232-0.30512735654709	chr10	3972802	3973849	+	0	NA	Intergenic	RLTR18B|LTR|ERVK	-415385	NM_001039652	18390	Mm.439715	NM_011013	ENSMUSG00000000766	Oprm1	M-OR-1|MOP-R|MOR-1|MOR-1O|Oprm|mor|muOR	opioid receptor, mu 1	protein-coding
common_peak2-32227-8-7-0.00522241794757061-1.00793137938329	chr9	123123968	123124403	+	0	NA	intron (NM_133974, intron 1 of 8)	intron (NM_133974, intron 1 of 8)	971	NM_133974	109332	Mm.27519	NM_133974	ENSMUSG00000035498	Cdcp1	9030022E12Rik|AA409659|E030027H19Rik	CUB domain containing protein 1	protein-coding
common_peak2-21413-24-21-0.333778284130419-0.518921928796332	chr11	83850756	83851749	+	0	NA	intron (NM_194341, intron 18 of 19)	L1ME2|LINE|L1	30607	NM_019819	56405	Mm.240885	NM_019819	ENSMUSG00000018648	Dusp14	1110014C10Rik|2310042C07Rik|D11Ertd395e|MKP-L|Mkp6	dual specificity phosphatase 14	protein-coding
common_peak2-21403-39-51--0.0846784712219382-0.309716464454027	chr11	82781069	82782066	+	0	NA	Intergenic	RMER19B|LTR|ERVK	-7384	NR_045932	76392	Mm.295205	NR_045932	ENSMUSG00000086327	Slfn5os	1700003F17Rik	schlafen 5, opposite strand	ncRNA
unique_peak1-805-10-6-0.549060422951165-1.21398586181642	chr11	3485731	3486338	+	0	NA	Intergenic	B4A|SINE|B4	-46739	NM_001284428	29856	Mm.188516	NM_013870	ENSMUSG00000020439	Smtn	smsmo	smoothelin	protein-coding
unique_peak1-1207-9-1-2.18961340640422-2.31132995230379	chr11	105951343	105951840	+	0	NA	intron (NM_011947, intron 1 of 15)	RSINE1|SINE|B4	5375	NM_011947	26406	Mm.27041	NM_011947	ENSMUSG00000020700	Map3k3	AW548911|MAPKKK3|Mekk3|mKIAA4031	mitogen-activated protein kinase kinase kinase 3	protein-coding
common_peak2-24486-16-25--0.58217607587303-0.633951497070961	chr17	24855210	24856010	+	0	NA	promoter-TSS (NM_026205)	promoter-TSS (NM_026205)	-608	NM_026205	67504	Mm.46159	NM_026205	ENSMUSG00000008482	Rnf151	1700010O16Rik|AV047371	ring finger protein 151	protein-coding
unique_peak1-462-8-1-2.00522241794757-2.05605744720049	chr1	170925288	170925711	+	0	NA	Intergenic	Intergenic	504725	NR_105766	102465178		NR_105766	miRBase:MI0021876	Mir6348	mmu-mir-6348	microRNA mir-6348	ncRNA
common_peak1-10206-41-17-1.53122370340635-4.34131796804826	chr13	48552193	48553311	+	0	NA	Intergenic	Intergenic	56027	NM_001164575	67911	Mm.251375	NM_026450	ENSMUSG00000050954	Zfp169	1700025J14Rik|4930429A13Rik|BE688704	zinc finger protein 169	protein-coding
unique_peak1-2347-15-2-2.4272022498345-3.53487848679804	chr15	85625609	85626155	+	0	NA	intron (NM_011144, intron 6 of 7)	B3|SINE|B2	16245	NM_001164626	72355	Mm.33706	NM_197998	ENSMUSG00000064284	Cdpf1	2210021J22Rik	cysteine rich, DPF motif domain containing 1	protein-coding
unique_peak1-5737-10-1-2.35641534500877-2.57096726280955	chr6	43668568	43669076	+	0	NA	Intergenic	L1VL2|LINE|L1	-52648	NM_013861	29807	Mm.320979	NM_013861	ENSMUSG00000029735	Tpk1	-	thiamine pyrophosphokinase	protein-coding
unique_peak1-5756-11-1-2.50869358425161-2.83420869758413	chr6	50692138	50692808	+	0	NA	Intergenic	Intergenic	-33641	NR_045984	319981	Mm.131454	NR_045984		C530044C16Rik	-	RIKEN cDNA C530044C16 gene	ncRNA
common_peak2-25159-10-13--0.450939577048835-0.386243247519795	chr18	50053285	50053887	+	0	NA	exon (NM_001081371, exon 24 of 43)	exon (NM_001081371, exon 24 of 43)	60935	NM_001081371	240283	Mm.257790	NM_001081371	ENSMUSG00000037416	Dmxl1	C630007L23Rik|D030030C22	Dmx-like 1	protein-coding
common_peak1-17519-14-20--0.493101262421116-0.456667090758524	chr7	28179497	28180036	+	0	NA	promoter-TSS (NM_001199235)	promoter-TSS (NM_001199235)	-241	NM_001199235	80297	Mm.459123	NM_032610	ENSMUSG00000011751	Sptbn4	1700022P15Rik|5830426A08Rik|ROSA62|SpbIV|Spnb4|dyn|lnd|nmf261|nmf379|qv	spectrin beta, non-erythrocytic 4	protein-coding
common_peak1-12274-56-53-0.480708323275775-1.12620916894576	chr17	43389103	43390543	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-17473	NM_133776	77596	Mm.159950	NM_133776	ENSMUSG00000041293	Gpr110	5031409J19Rik|KPG_009	G protein-coupled receptor 110	protein-coding
common_peak1-15987-99-158--0.0935252120017047-0.358331125237602	chr5	32458226	32460112	+	0	NA	3' UTR (NM_008037, exon 4 of 4)	3' UTR (NM_008037, exon 4 of 4)	20324	NM_008037	14284	Mm.24684	NM_008037	ENSMUSG00000029135	Fosl2	Fra-2	fos-like antigen 2	protein-coding
common_peak2-23739-42-20-1.35001190508842-3.82396535842625	chr15	97581391	97582388	+	0	NA	intron (NM_001177810, intron 18 of 27)	intron (NM_001177810, intron 18 of 27)	16208	NM_001177810	223864	Mm.24028	NM_144850	ENSMUSG00000022469	Rapgef3	2310016P22Rik|9330170P05Rik|Epac|Epac1	Rap guanine nucleotide exchange factor (GEF) 3	protein-coding
common_peak2-31361-28-55--0.754395802236141-1.50810240303318	chr8	84799225	84800685	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	126530	NM_001254747	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
unique_peak1-1238-19-6-1.59533240460408-2.21753093801298	chr11	113254557	113255439	+	0	NA	intron (NM_027216, intron 5 of 9)	intron (NM_027216, intron 5 of 9)	172131	NM_001166503	69806	Mm.341021	NM_027216	ENSMUSG00000041654	Slc39a11	1810074D23Rik	solute carrier family 39 (metal ion transporter), member 11	protein-coding
unique_peak1-3261-8-0-3.00522241794757-2.70926996097583	chr18	66441442	66441897	+	0	NA	intron (NM_178793, intron 2 of 10)	(TTATA)n|Simple_repeat|Simple_repeat	9823	NM_178793	320924	Mm.442049	NM_178793	ENSMUSG00000046318	Ccbe1	4933426F18Rik|9430093N24Rik|mKIAA1983	collagen and calcium binding EGF domains 1	protein-coding
common_peak1-16204-9-21--1.26981821223308-1.37307999835977	chr5	92962224	92962745	+	0	NA	Intergenic	RMER16-int|LTR|ERVK	-27850	NM_007644	12492	Mm.297964	NM_007644	ENSMUSG00000029426	Scarb2	9330185J12Rik|Cd36l2|LGP85|LIMP-2|MLGP85	scavenger receptor class B, member 2	protein-coding
unique_peak2-34836-4-7--1.02346051385325-1.09384600808989	chr15	75747910	75748288	+	0	NA	intron (NM_025412, intron 4 of 5)	intron (NM_025412, intron 4 of 5)	3891	NM_025412	66194	Mm.250599	NM_025412	ENSMUSG00000022571	Pycrl	1110058B13Rik|2700073G24Rik	pyrroline-5-carboxylate reductase-like	protein-coding
common_peak2-24614-7-12--0.901348887842903-1.31827279259406	chr17	33783208	33783663	+	0	NA	TTS (NR_028279)	TTS (NR_028279)	8395	NR_028279	378460	Mm.272606	NM_001002842	ENSMUSG00000032739	Pram1	AY665714	PML-RAR alpha-regulated adaptor molecule 1	protein-coding
common_peak1-12856-90-89-0.562451929612477-2.20730754504573	chr18	75341898	75343904	+	0	NA	intron (NM_027727, intron 13 of 16)	intron (NM_027727, intron 13 of 16)	114070	NR_045394	100503117	Mm.250517	NR_045393		2010010A06Rik	5033420E22Rik	RIKEN cDNA 2010010A06 gene	ncRNA
common_peak2-32062-58-108--0.472234389886429-1.28156456703858	chr9	90113716	90114701	+	0	NA	intron (NM_194334, intron 8 of 12)	intron (NM_194334, intron 8 of 12)	51399	NM_194334	67016	Mm.335347	NM_194334	ENSMUSG00000037410	Tbc1d2b	1810061M12Rik|AI480956|AV021536|AV023399|AW491493|mKIAA1055	TBC1 domain family, member 2B	protein-coding
unique_peak1-6095-10-0-3.35641534500877-3.31132995230379	chr6	125040668	125041251	+	0	NA	Intergenic	B3|SINE|B2	-5222	NM_145979	107932	Mm.333388	NM_145979	ENSMUSG00000063870	Chd4	9530019N15Rik|AA617397|BC005710|D6Ertd380e|Mi-2beta|mKIAA4075	chromodomain helicase DNA binding protein 4	protein-coding
unique_peak2-37523-3-9--1.73591118484664-1.57096726280955	chr5	23386716	23387195	+	0	NA	Intergenic	RMER16-int|LTR|ERVK	28904	NR_028536	100217436		NR_028536		Snord93	Gm22397|MBII-336	small nucleolar RNA, C/D box 93	snoRNA
unique_peak2-37900-13-36--1.43098133499118-2.47671208917977	chr5	142439704	142440536	+	0	NA	intron (NM_177879, intron 13 of 44)	intron (NM_177879, intron 13 of 44)	-437331	NM_199068	17425	Mm.24214	NM_010812	ENSMUSG00000056493	Foxk1	A630048H08Rik|AI463295|ENSMUSG00000075577|Gm10868|Mnf	forkhead box K1	protein-coding
unique_peak2-37727-7-6--0.00826409175941478-0.97990265578305	chr5	106963954	106964249	+	0	NA	Intergenic	MTD|LTR|MaLR	-76916	NM_001005477	104382	Mm.271593	NM_001005477	ENSMUSG00000034384	Barhl2	E130309B19Rik|MBH1	BarH-like 2 (Drosophila)	protein-coding
common_peak2-30108-8-14--0.901668177660948-0.660903317613906	chr6	135319913	135320662	+	0	NA	intron (NM_001288627, intron 1 of 4)	intron (NM_001288627, intron 1 of 4)	2776	NM_001288627	13730	Mm.182785	NM_010128	ENSMUSG00000030208	Emp1	I-8-09|TMP	epithelial membrane protein 1	protein-coding
common_peak1-12714-10-15--0.643584654991231-0.519648556297791	chr18	49755981	49756499	+	0	NA	Intergenic	L2|LINE|L2	73297	NR_033785	67321	Mm.245802	NR_033785		1700044K03Rik	-	RIKEN cDNA 1700044K03 gene	ncRNA
common_peak2-29017-7-11--0.785871670422967-1.21681515183528	chr5	112280326	112280886	+	0	NA	Intergenic	MTB_Mm|LTR|MaLR	-89858	NR_045833	269683	Mm.136946	NM_207252	ENSMUSG00000085271	E130006D01Rik	Gm16018|Gm681|OTTMUSG00000029083	RIKEN cDNA E130006D01 gene	ncRNA
common_peak2-23105-34-35-0.212143525558954-0.439405572480892	chr14	78848571	78849777	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	87493	NM_001164503	219181	Mm.89413	NM_001164503	ENSMUSG00000022016	Akap11	6330501D17Rik|AKAP220|Gm80|PRKA11|mKIAA0629	A kinase (PRKA) anchor protein 11	protein-coding
common_peak2-21174-61-64-0.360381516720886-0.835791152470286	chr11	59655660	59657018	+	0	NA	Intergenic	Intergenic	-3070	NM_011991	26572	Mm.40	NM_011991	ENSMUSG00000019373	Cops3	Csn3|Sgn3	COP9 (constitutive photomorphogenic) homolog, subunit 3 (Arabidopsis thaliana)	protein-coding
common_peak1-10449-25-34--0.26743311159986-0.387290225425543	chr13	107021546	107022689	+	0	NA	Intergenic	ORR1E|LTR|MaLR	704878	NM_029665	76582	Mm.132208	NM_029665	ENSMUSG00000042590	Ipo11	1700081H05Rik|2510001A17Rik|AI314624|AW555235|E330021B14Rik|Ranbp11	importin 11	protein-coding
common_peak2-21959-9-11--0.395349094316936-0.344532117358383	chr12	34487446	34487878	+	0	NA	Intergenic	Intergenic	-125628	NM_033522	114712	Mm.204643	NM_033522	ENSMUSG00000046518	Ferd3l	Mnato3|N-twist|Nato|Nato3|Ntwist|bHLHa31|fer3	Fer3-like (Drosophila)	protein-coding
unique_peak1-1280-7-0-2.79909083029819-2.40823996531185	chr11	118351186	118351702	+	0	NA	TTS (NM_172573)	TTS (NM_172573)	13170	NM_172573	217364	Mm.473963	NM_172573	ENSMUSG00000033857	Engase	C130099A03|D230014K01Rik	endo-beta-N-acetylglucosaminidase	protein-coding
unique_peak1-1310-9-1-2.18961340640422-2.31132995230379	chr11	120518259	120518768	+	0	NA	intron (NM_175263, intron 7 of 11)	intron (NM_175263, intron 7 of 11)	3638	NM_175263	77583	Mm.32839	NM_175263	ENSMUSG00000042988	Notum	5730593N15Rik	notum pectinacetylesterase homolog (Drosophila)	protein-coding
unique_peak2-38044-7-9--0.522837264589173-1.05908390183068	chr6	38847112	38847567	+	0	NA	Intergenic	Intergenic	-21150	NM_001294143	15258	Mm.23790	NM_010433	ENSMUSG00000061436	Hipk2	1110014O20Rik|B230339E18Rik|Stank	homeodomain interacting protein kinase 2	protein-coding
common_peak2-22621-18-24--0.330937038546373-0.380101753845076	chr13	80884224	80885153	+	0	NA	Intergenic	Intergenic	-137995	NM_001042591	105171	Mm.423137	NM_001042591	ENSMUSG00000074794	Arrdc3	AI450344|mKIAA1376	arrestin domain containing 3	protein-coding
common_peak2-30406-6-5--0.0195643903408542-0.947717972411649	chr7	35119392	35119748	+	0	NA	Intergenic	RLTR41|LTR|ERV1	-48942	NM_172741	233103	Mm.491097	NM_172741	ENSMUSG00000066571	4931406P16Rik	AA553327|mKIAA0355	RIKEN cDNA 4931406P16 gene	protein-coding
common_peak1-16660-80-87-0.391144147732055-1.14653911005527	chr6	125008167	125010064	+	0	NA	intron (NM_016845, intron 6 of 9)	intron (NM_016845, intron 6 of 9)	-8823	NM_001163269	381810	Mm.333386	NM_001163268	ENSMUSG00000067714	Lpar5	GPR93|Gm1072|Gpr92|LPA5	lysophosphatidic acid receptor 5	protein-coding
common_peak1-14967-14-20--0.493101262421116-0.456667090758524	chr3	105686771	105687381	+	0	NA	intron (NM_027025, intron 1 of 6)	Lx3C|LINE|L1	13300	NM_001174169	11542	Mm.235024	NM_009631	ENSMUSG00000000562	Adora3	1700001D09Rik|4930578J19Rik|A3AR|A3R|AA3R|ARA3|Gpcr2	adenosine A3 receptor	protein-coding
common_peak1-11279-21-19-0.247561170378873-0.427564438475253	chr15	82338467	82339187	+	0	NA	Intergenic	RMER17A-int|LTR|ERVK	-46701	NM_201360	380997	Mm.482248	NM_201360	ENSMUSG00000096852	Cyp2d12	9030605E09Rik	cytochrome P450, family 2, subfamily d, polypeptide 12	protein-coding
unique_peak2-38605-33-83--1.06097986025323-3.63527207562039	chr7	79828663	79830566	+	0	NA	Intergenic	Intergenic	-378133	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding
unique_peak1-2258-8-3-1.00522241794757-1.39487600375387	chr15	77833877	77834284	+	0	NA	intron (NM_007583, intron 2 of 3)	intron (NM_007583, intron 2 of 3)	-32826	NM_018749	55944	Mm.3955	NM_018749	ENSMUSG00000016554	Eif3d	66/67kDa|AA407891|Eif3s7|eIF3p66	eukaryotic translation initiation factor 3, subunit D	protein-coding
common_peak2-30345-20-39--0.83385331029617-1.34355844763204	chr7	27165968	27166904	+	0	NA	intron (NM_001042612, intron 3 of 8)	(TTTG)n|Simple_repeat|Simple_repeat	12826	NM_001042612	330490	Mm.212174	NM_194062	ENSMUSG00000040614	Nlrp9c	AA636537|BB062542|Nalp-zeta|Nalp9c	NLR family, pyrin domain containing 9C	protein-coding
common_peak1-9809-17-14-0.311405742596519-0.466170754204149	chr12	69474458	69475234	+	0	NA	Intergenic	B4|SINE|B4	-704588	NR_033146	100316870	Mm.379794	NR_033146		Gm17821	-	DDB1 and CUL4 associated factor 5 pseudogene	pseudo
unique_peak2-36572-5-6--0.511735258063458-0.947717972411649	chr2	172440545	172441033	+	0	NA	Intergenic	Intergenic	64298	NM_001159696	21420	Mm.3629	NM_009335	ENSMUSG00000028640	Tfap2c	AA409384|AP2gamma|Ap-2.2|Stra2|Tcfap2c	transcription factor AP-2, gamma	protein-coding
common_peak2-26675-32-60--0.651645318343227-1.27570999829275	chr2	122701915	122703168	+	0	NA	Intergenic	ORR1B1|LTR|MaLR	94806	NM_021507	59010	Mm.28986	NM_021507	ENSMUSG00000005803	Sqrdl	0610039J17Rik|4930557M22Rik	sulfide quinone reductase-like (yeast)	protein-coding
unique_peak2-34325-4-6--0.830815435910851-0.989110657569874	chr13	97248398	97248805	+	0	NA	Intergenic	Lx3_Mus|LINE|L1	-7486	NM_001042714	271144	Mm.470057	NM_001042714	ENSMUSG00000047117	Ankdd1b	9330128J19Rik	ankyrin repeat and death domain containing 1B	protein-coding
common_peak1-14947-14-49--1.74464002941708-4.4324081904224	chr3	103914413	103915073	+	0	NA	intron (NM_001159354, intron 1 of 20)	B1_Mur2|SINE|Alu	109586	NM_133853	99470	Mm.264849	NM_133853	ENSMUSG00000052539	Magi3	4732496O19Rik|6530407C02Rik|AA407180|AI120132|mKIAA1634	membrane associated guanylate kinase, WW and PDZ domain containing 3	protein-coding
common_peak2-23390-6-7--0.434601889619698-0.97990265578305	chr15	58324271	58324672	+	0	NA	Intergenic	MTE2a|LTR|MaLR	77448	NM_145959	210998	Mm.3224	NM_145959	ENSMUSG00000037119	D15Ertd621e	AV220772|BC033609|Fam91a1|SKIN|mKIAA0493	DNA segment, Chr 15, ERATO Doi 621, expressed	protein-coding
common_peak1-10516-11-13--0.298661337805991-0.337263207250336	chr14	7933391	7934024	+	0	NA	intron (NM_001024712, intron 2 of 6)	intron (NM_001024712, intron 2 of 6)	4264	NM_001024712	100042149	Mm.396155	NM_001024712	ENSMUSG00000092167	Gm3696	544988|ENSMUSG00000056940|Gm10014	predicted gene 3696	protein-coding
common_peak1-10203-45-84--0.54903291079283-1.34062813340368	chr13	47105447	47107000	+	0	NA	Intergenic	CpG	3996	NM_175340	105193	Mm.25593	NM_175340	ENSMUSG00000044231	Nhlrc1	AI505271|B230309E09Rik|EPM2B	NHL repeat containing 1	protein-coding
common_peak1-18761-25-10-1.40241828670781-2.39922209159552	chr8	126757942	126758950	+	0	NA	intron (NM_139272, intron 1 of 15)	intron (NM_139272, intron 1 of 15)	3152	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
unique_peak1-1575-21-8-1.39956426382392-2.11898024768848	chr13	31531685	31532797	+	0	NA	Intergenic	Intergenic	-117798	NM_008239	15220	Mm.44235	NM_008239	ENSMUSG00000038415	Foxq1	HFH-1|Hfh1|Hfh1l|sa	forkhead box Q1	protein-coding
common_peak1-18244-12-12--0.0516637330534535-0.309718203022949	chr8	33384940	33385449	+	0	NA	Intergenic	Intergenic	122827	NR_046039	666589	Mm.367675	NR_046039		Gm8179	EG666589	predicted gene 8179	ncRNA
common_peak2-25839-45-50-0.187932683373377-0.429827778234671	chr19	41454364	41455944	+	0	NA	intron (NM_031376, intron 1 of 16)	intron (NM_031376, intron 1 of 16)	4406	NM_031376	83490	Mm.222266	NM_031376	ENSMUSG00000025017	Pik3ap1	1810044J04Rik|BCAP	phosphoinositide-3-kinase adaptor protein 1	protein-coding
common_peak2-24513-19-19-0.0807592317743238-0.322753776620787	chr17	26601313	26602198	+	0	NA	Intergenic	MIR|SINE|MIR	43662	NM_013642	19252	Mm.239041	NM_013642	ENSMUSG00000024190	Dusp1	3CH134|MKP1|Ptpn16|U19515|erp|mkp-1	dual specificity phosphatase 1	protein-coding
common_peak2-22650-13-17--0.391452970804544-0.364171515310935	chr13	94057452	94058330	+	0	NA	Intergenic	L1_Mus2|LINE|L1	-16559	NM_147176	26556	Mm.37533	NM_011982		Homer1	PSD-Zip45|SYN47|Ves-1|homer-1|vesl-1	homer homolog 1 (Drosophila)	protein-coding
unique_peak2-35410-9-12--0.510826311736872-0.394412252720706	chr17	33358312	33359203	+	0	NA	Intergenic	Intergenic	-5461	NM_001199062	100043474	Mm.463172	NM_001199062	ENSMUSG00000096169	Gm4461	ENSMUSG00000079307|Ga_x5j8b7w2m1k-1-552	predicted gene 4461	protein-coding
unique_peak1-1726-6-0-2.5653981103803-2.10720996964787	chr13	98651249	98651694	+	0	NA	Intergenic	Intergenic	321516	NR_046157	328314	Mm.138047	NR_046157		Gm5086	B230311A21|EG328314	predicted gene 5086	ncRNA
common_peak2-28117-18-13-0.505564229170747-0.625923329873571	chr4	89053584	89054112	+	0	NA	Intergenic	Intergenic	-96907	NM_007670	12579	Mm.423094	NM_007670	ENSMUSG00000073802	Cdkn2b	AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b	cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)	protein-coding
unique_peak2-34685-4-8--1.19338551529556-1.21878474469819	chr15	15284323	15284724	+	0	NA	Intergenic	Intergenic	-1423333	NM_009869	12565	Mm.439758	NM_009869	ENSMUSG00000025370	Cdh9	-	cadherin 9	protein-coding
common_peak2-28250-10-9-0.0344872501214071-1.05503135781948	chr4	125066626	125067065	+	0	NA	Intergenic	Intergenic	-101230	NM_001081097	14807	Mm.40896	NM_001081097	ENSMUSG00000001985	Grik3	9630027E11|GluK3|GluR7-3|Glur-7|Glur7	glutamate receptor, ionotropic, kainate 3	protein-coding
common_peak2-19798-6-9--0.75652998450706-1.11707584880836	chr1	87574147	87574655	+	0	NA	intron (NM_013673, intron 9 of 19)	intron (NM_013673, intron 9 of 19)	27776	NM_013673	20684	Mm.290906	NM_013673	ENSMUSG00000026222	Sp100	A430075G10Rik	nuclear antigen Sp100	protein-coding
common_peak1-16324-18-22--0.210642804828661-0.321718508207525	chr5	115631868	115632777	+	0	NA	intron (NM_013879, intron 1 of 6)	intron (NM_013879, intron 1 of 6)	3808	NM_013879	29867	Mm.38551	NM_013879	ENSMUSG00000029544	Cabp1	caldendrin	calcium binding protein 1	protein-coding
unique_peak1-6987-6-5--0.0195643903408542-0.947717972411649	chr8	120486414	120486929	+	0	NA	Intergenic	Intergenic	-160842	NM_026758	68533	Mm.181836	NM_026758	ENSMUSG00000031843	Mphosph6	1110001M01Rik|AA536809|C86426	M phase phosphoprotein 6	protein-coding
unique_peak2-33226-7-15--1.20090916970181-0.947446088118041	chr10	120222529	120223259	+	0	NA	intron (NM_177092, intron 6 of 6)	intron (NM_177092, intron 6 of 6)	20106	NR_038003	70874	Mm.427286	NR_038000	ENSMUSG00000044544	4921513I03Rik	-	RIKEN cDNA 4921513I03 gene	ncRNA
unique_peak1-4163-8-2-1.42025991722641-1.65811743852845	chr2	107950306	107950831	+	0	NA	Intergenic	Intergenic	819822	NM_021275	16492	Mm.142718	NM_021275	ENSMUSG00000042604	Kcna4	Kv1.4	potassium voltage-gated channel, shaker-related subfamily, member 4	protein-coding
common_peak1-9617-55-38-0.919217652290453-2.85889490250062	chr11	120850141	120852017	+	0	NA	intron (NM_027874, intron 1 of 9)	intron (NM_027874, intron 1 of 9)	1568	NM_139059	104318	Mm.216227	NM_027874	ENSMUSG00000025162	Csnk1d	1200006A05Rik|AA409348|D930010H05Rik	casein kinase 1, delta	protein-coding
common_peak2-29832-5-5--0.289342836727009-0.909929411522249	chr6	94225879	94226232	+	0	NA	intron (NM_001286784, intron 1 of 22)	L2|LINE|L2	7856	NM_001286786	14924	Mm.217216	NM_010367	ENSMUSG00000045095	Magi1	AIP3|BAP1|Baiap1|Gukmi1|MAGI1c|Magi-1|TNRC19|WWP3|mKIAA4129	membrane associated guanylate kinase, WW and PDZ domain containing 1	protein-coding
common_peak2-24698-31-48--0.389471173302085-0.611014125894502	chr17	45432872	45434424	+	0	NA	Intergenic	Intergenic	137008	NM_152810	71702	Mm.28270	NM_152810	ENSMUSG00000023932	Cdc5l	1200002I02Rik|AA408004|PCDC5RP	cell division cycle 5-like (S. pombe)	protein-coding
unique_peak1-4856-47-7-2.93484142476655-10.9812698525472	chr4	45137492	45139417	+	0	NA	Intergenic	Intergenic	-17469	NM_001099675	68512	Mm.282081	NM_001099675	ENSMUSG00000078713	Tomm5	1110019J04Rik|Tom5	translocase of outer mitochondrial membrane 5 homolog (yeast)	protein-coding
common_peak1-14413-9-6-0.382258484346616-1.11707584880836	chr2	175206297	175206789	+	0	NA	intron (NM_001177404, intron 2 of 2).3	MurSatRep1|Unknown|Unknown	8580	NM_001177406	100303732	Mm.484983	NM_001177404		Gm14431	OTTMUSG00000016608	predicted gene 14431	protein-coding
common_peak2-23046-21-18-0.32156175182265-0.48779450977742	chr14	69816302	69816853	+	0	NA	Intergenic	Intergenic	7828	NM_010921	18095	Mm.3520	NM_010921	ENSMUSG00000022061	Nkx3-1	Bax|NKX3.1|NKX3A|Nkx-3.1|bagpipe	NK-3 transcription factor, locus 1 (Drosophila)	protein-coding
unique_peak1-3863-10-6-0.549060422951165-1.21398586181642	chr2	8743948	8744483	+	0	NA	Intergenic	Intergenic	-366927	NR_038180	73438	Mm.23558	NR_038180	ENSMUSG00000085580	1700061F12Rik	-	RIKEN cDNA 1700061F12 gene	ncRNA
unique_peak1-624-17-3-2.21829633820504-3.11807310444576	chr10	24835814	24836594	+	0	NA	Intergenic	Intergenic	182765	NM_018747	432442	Mm.485937	NM_018747	ENSMUSG00000039166	Akap7	6430401D08|AI662165|AKAP15|Akap18|BB170514	A kinase (PRKA) anchor protein 7	protein-coding
common_peak1-17611-15-19--0.309763344331706-0.356936432242222	chr7	45339542	45340066	+	0	NA	Intergenic	Intergenic	1180100	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak2-30747-25-22-0.338287949288093-0.51032171069054	chr7	118934499	118935409	+	0	NA	Intergenic	Intergenic	-11463	NM_173739	233733	Mm.323322	NM_173739	ENSMUSG00000038296	Galnt18	2900011G21Rik|BC024988|Galntl4	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 18	protein-coding
common_peak1-10074-9-10--0.269818212233077-1.05503135781948	chr13	23538242	23538858	+	0	NA	Intergenic	PB1D7|SINE|Alu	-15664	NR_015492	320842	Mm.487476	NR_015492	ENSMUSG00000085024	C230035I16Rik	-	RIKEN cDNA C230035I16 gene	ncRNA
common_peak2-22868-10-23--1.22854715571239-1.44380006500971	chr14	30479622	30480378	+	0	NA	intron (NM_009785, intron 2 of 37)	intron (NM_009785, intron 2 of 37)	55050	NM_009785	12294	Mm.386754	NM_009785	ENSMUSG00000021991	Cacna2d3	Cacnad3	calcium channel, voltage-dependent, alpha2/delta subunit 3	protein-coding
common_peak1-10000-12-12--0.0516637330534535-0.309718203022949	chr13	112770640	112771412	+	0	NA	Intergenic	MIRc|SINE|MIR	-171835	NM_011945	26401	Mm.15918	NM_011945	ENSMUSG00000021754	Map3k1	MAPKKK1|MEKK1|Mekk	mitogen-activated protein kinase kinase kinase 1	protein-coding
common_peak1-12331-8-7-0.00522241794757061-1.00793137938329	chr17	50679481	50679994	+	0	NA	intron (NM_013880, intron 1 of 5)	intron (NM_013880, intron 1 of 5)	30865	NM_013880	224860	Mm.217362	NM_013880	ENSMUSG00000038910	Plcl2	PLC-L2|PRIP-2|Plce2|mKIAA1092	phospholipase C-like 2	protein-coding
unique_peak2-39355-2-6--1.72480917832092-1.26211192963361	chr9	6313077	6313398	+	0	NA	intron (NM_027924, intron 3 of 6)	Lx5|LINE|L1	-46690	NM_027942	71829	Mm.141452	NM_027942	ENSMUSG00000047619	Ddi1	1700011N24Rik	DDI1, DNA-damage inducible 1, homolog 1 (S. cerevisiae)	protein-coding
common_peak2-29278-32-76--0.987694521475241-2.93258054373007	chr5	142928755	142929730	+	0	NA	intron (NM_199068, intron 5 of 8)	intron (NM_199068, intron 5 of 8)	-10643	NM_172725	231855	Mm.78250	NM_172725	ENSMUSG00000039623	Ap5z1	C330006K01Rik	adaptor-related protein complex 5, zeta 1 subunit	protein-coding
unique_peak1-5640-14-5-1.31425365963649-1.4372489031793	chr6	22485945	22486546	+	0	NA	Intergenic	Lx9|LINE|L1	-180164	NM_138587	27999	Mm.490307	NM_138587	ENSMUSG00000029672	Fam3c	D6Wsu176e|Ilei	family with sequence similarity 3, member C	protein-coding
unique_peak2-38350-7-10--0.660340788339108-1.12966497611638	chr7	143015461	143016094	+	0	NA	Intergenic	Intergenic	-107715	NM_001081117	17345	Mm.4078	NM_001081117	ENSMUSG00000031004	Mki67	D630048A14Rik|Ki-67|Ki67	antigen identified by monoclonal antibody Ki 67	protein-coding
common_peak2-29839-15-7-1.01216475055566-1.08658567012551	chr6	94657849	94658332	+	0	NA	Intergenic	B3|SINE|B2	-7951	NM_008377	16206	Mm.245210	NM_008377	ENSMUSG00000030029	Lrig1	D6Bwg0781e|Img|LIG-1	leucine-rich repeats and immunoglobulin-like domains 1	protein-coding
unique_peak1-3623-8-2-1.42025991722641-1.65811743852845	chr19	36678293	36678739	+	0	NA	intron (NM_001163471, intron 11 of 20)	intron (NM_001163471, intron 11 of 20)	49387	NM_172637	226098	Mm.61107	NM_172637	ENSMUSG00000041180	Hectd2	4921524L07|A630025O09Rik|AW212605	HECT domain containing 2	protein-coding
unique_peak1-5204-32-7-2.27909201921966-5.62875549298796	chr5	35671178	35672547	+	0	NA	Intergenic	Intergenic	-32340	NR_046060	74429	Mm.399502	NR_046060		4930478P22Rik	4933405A14Rik	RIKEN cDNA 4930478P22 gene	ncRNA
unique_peak2-39724-4-6--0.830815435910851-0.989110657569874	chr9	121314221	121314585	+	0	NA	intron (NM_175114, intron 2 of 15)	intron (NM_175114, intron 2 of 15)	38327	NM_175114	67095	Mm.491112	NM_175114	ENSMUSG00000032536	Trak1	2310001H13Rik|AI413908|AI467545|hyrt|mKIAA1042	trafficking protein, kinesin binding 1	protein-coding
unique_peak2-36232-5-7--0.704380336005853-1.01466476204226	chr2	35994509	35994980	+	0	NA	intron (NM_026422, intron 1 of 6)	intron (NM_026422, intron 1 of 6)	-2520	NR_027515	67889	Mm.205937	NM_026434	ENSMUSG00000026889	Rbm18	2010004P11Rik|AU015530	RNA binding motif protein 18	protein-coding
common_peak2-30315-7-6--0.00826409175941478-0.97990265578305	chr7	24399600	24399910	+	0	NA	Intergenic	L1VL4|LINE|L1	8561	NM_001166722	546944	Mm.480274	NM_001166722	ENSMUSG00000094187	Vmn1r170	EG546944|Gm5999	vomeronasal 1 receptor 170	protein-coding
unique_peak1-2521-15-1-3.01216475055566-4.18809100057339	chr16	20373552	20374197	+	0	NA	intron (NM_013790, intron 16 of 29)	intron (NM_013790, intron 16 of 29)	-48397	NM_183158	224044	Mm.276400	NM_183158	ENSMUSG00000022818	Cyp2ab1	EG224044|F730023N20	cytochrome P450, family 2, subfamily ab, polypeptide 1	protein-coding
unique_peak1-3049-10-3-1.35641534500877-1.75805390616669	chr18	5819283	5819800	+	0	NA	Intergenic	Intergenic	-227106	NR_033552	791318	Mm.84339	NR_033552	ENSMUSG00000063087	Gm10125	ENSMUSG00000063087|Zeb1os	predicted gene 10125	ncRNA
unique_peak2-35968-12-7-0.648775985087639-0.697979855752659	chr19	18714374	18714858	+	0	NA	intron (NM_145497, intron 4 of 8)	RSINE1|SINE|B4	8110	NM_145497	225994	Mm.211595	NM_145497	ENSMUSG00000037847	Nmrk1	AA408380|D630020N23Rik|Nrk1	nicotinamide riboside kinase 1	protein-coding
common_peak2-25621-9-8-0.0196884049619079-1.03275496310833	chr19	9040458	9040881	+	0	NA	promoter-TSS (NM_026007)	promoter-TSS (NM_026007)	-862	NM_026007	67160	Mm.247762	NM_026007	ENSMUSG00000071644	Eef1g	2610301D06Rik|AA407312|EF1G	eukaryotic translation elongation factor 1 gamma	protein-coding
common_peak1-8275-12-31--1.35122401491236-1.94790812833823	chr10	25360014	25360756	+	0	NA	Intergenic	Intergenic	-104307	NM_001195596	100504474	Mm.46323	NM_001195596	ENSMUSG00000096546	Smlr1	2010003K15Rik	small leucine-rich protein 1	protein-coding
unique_peak2-39640-10-32--1.68797877434968-2.93261892307636	chr9	103304543	103305641	+	0	NA	Intergenic	Intergenic	-20816	NR_040466	100529079	Mm.437003	NR_040466	ENSMUSG00000086236	5830418P13Rik	-	RIKEN cDNA 5830418P13 gene	ncRNA
common_peak2-31055-414-490-0.770354346612008-20.2354071549914	chr8	19784415	19785902	+	0	NA	Intergenic	CpG	55582	NM_001039553	626415	Mm.425517	NM_001039553		4930467E23Rik	ENSMUSG00000074453|OTTMUSG00000018948|TSAP	RIKEN cDNA 4930467E23 gene	protein-coding
unique_peak1-6117-24-6-1.98585498071011-3.65509904868667	chr6	128420723	128421859	+	0	NA	intron (NR_028593, intron 2 of 4)	intron (NR_028593, intron 2 of 4)	32516	NR_028592	791299	Mm.297516	NR_028592	ENSMUSG00000059659	Gm10069	ENSMUSG00000059659	predicted gene 10069	ncRNA
unique_peak1-7184-9-4-0.867685311516858-1.36011389749466	chr9	62817668	62818197	+	0	NA	intron (NM_019663, intron 1 of 13)	B1_Mur1|SINE|Alu	10754	NM_019663	56469	Mm.431253	NM_019663	ENSMUSG00000032405	Pias1	2900068C24Rik|Ddxbp1|GBP	protein inhibitor of activated STAT 1	protein-coding
unique_peak2-39553-4-7--1.02346051385325-1.09384600808989	chr9	70049466	70049922	+	0	NA	Intergenic	Intergenic	-5463	NM_181072	71602	Mm.249311	NM_181072	ENSMUSG00000032220	Myo1e	2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3	myosin IE	protein-coding
common_peak1-18445-26-48--0.686810751956746-1.2112076832151	chr8	82773631	82774450	+	0	NA	Intergenic	Intergenic	-192133	NM_020259	15245	Mm.254493	NM_020259		Hhip	Hhip1	Hedgehog-interacting protein	protein-coding
common_peak1-18412-32-48--0.335617824895548-0.503563708672202	chr8	72570605	72572100	+	0	NA	intron (NM_027481, intron 1 of 13)	intron (NM_027481, intron 1 of 13)	4640	NM_027481	70616	Mm.17665	NM_027481	ENSMUSG00000011306	Sugp1	5730496N02Rik|Sf4	SURP and G patch domain containing 1	protein-coding
unique_peak1-719-12-3-1.64877598508764-2.36932189928148	chr10	93332716	93333293	+	0	NA	exon (NM_019648, exon 7 of 12)	exon (NM_019648, exon 7 of 12)	20943	NM_019648	56307	Mm.289329	NM_019648	ENSMUSG00000036112	Metap2	4930584B20Rik|A930035J23Rik|AI047573|AL024412|AU014659|Amp2|Mnpep|p67|p67eIF2	methionine aminopeptidase 2	protein-coding
common_peak1-8228-13-10-0.319040412000471-0.446472590016315	chr10	12694679	12695457	+	0	NA	Intergenic	Intergenic	-11003	NM_001163591	74732	Mm.248648	NM_029075	ENSMUSG00000039232	Stx11	5830405C08Rik	syntaxin 11	protein-coding
unique_peak1-1079-11-2-1.92373108353046-2.32232533660526	chr11	86645241	86645752	+	0	NA	Intergenic	Intergenic	-24334	NM_026191	67487	Mm.260627	NM_026191	ENSMUSG00000018425	Dhx40	2410016C14Rik|ARG147|DDX40|PAD	DEAH (Asp-Glu-Ala-His) box polypeptide 40	protein-coding
common_peak1-10363-29-30-0.158093770228236-0.384630725886669	chr13	91370306	91371607	+	0	NA	Intergenic	Intergenic	-7364	NM_025770	66795	Mm.235385	NM_025770	ENSMUSG00000021619	Atg10	5330424L23Rik|5430428K15Rik|AI852123|APG10|Agp10|Apg10l|Apg10p|Atg10l	autophagy related 10	protein-coding
common_peak1-15467-8-14--0.901668177660948-0.660903317613906	chr4	106678486	106678875	+	0	NA	intron (NM_198438, intron 4 of 16)	intron (NM_198438, intron 4 of 16)	60791	NM_025500	56280	Mm.29517	NM_025500	ENSMUSG00000028622	Mrpl37	2300004O14Rik|AI132596|MRP-L2|Rpml2	mitochondrial ribosomal protein L37	protein-coding
common_peak1-17878-8-22--1.51833953810944-1.77631109801764	chr7	116444202	116444697	+	0	NA	intron (NM_054103, intron 13 of 13)	L1MA6|LINE|L1	-130627	NM_057173	109594	Mm.360145	NM_057173	ENSMUSG00000036111	Lmo1	Rbtn-1|Rbtn1|Ttg1	LIM domain only 1	protein-coding
common_peak2-20929-45-87--0.599073593292426-1.56901764734008	chr11	6546165	6547630	+	0	NA	Intergenic	Intergenic	-8245	NM_011709	22373	Mm.268094	NM_011709	ENSMUSG00000000381	Wap	-	whey acidic protein	protein-coding
unique_peak2-35126-5-7--0.704380336005853-1.01466476204226	chr16	29944893	29945347	+	0	NA	Intergenic	MTEa|LTR|MaLR	34090	NR_037689	328657	Mm.425982	NM_001033403		Gm1968	-	predicted gene 1968	ncRNA
unique_peak1-2817-7-7--0.200909169701811-0.97990265578305	chr17	26514875	26515263	+	0	NA	Intergenic	MIRb|SINE|MIR	-36841	NM_001081656	240055	Mm.133211	NM_001081656	ENSMUSG00000034413	Neurl1b	C230078M08Rik|EG240055	neuralized homolog 1b (Drosophila)	protein-coding
common_peak1-11568-7-6--0.00826409175941478-0.97990265578305	chr16	13387783	13388309	+	0	NA	intron (NM_001122667, intron 8 of 16)	MTEa|LTR|MaLR	29532	NM_153588	239719	Mm.270643	NM_153588	ENSMUSG00000009569	Mkl2	ENSMUSG00000075401|Gt4-1|MRTF-B|Mrtfb|mKIAA1243	MKL/myocardin-like 2	protein-coding
common_peak2-28935-27-33--0.0959168903551033-0.304370854244436	chr5	96802486	96803618	+	0	NA	promoter-TSS (NM_175473)	promoter-TSS (NM_175473)	78	NM_175473	231470	Mm.291120	NM_175473	ENSMUSG00000034687	Fras1	E130113P14Rik|bl|mKIAA1500	Fraser syndrome 1 homolog (human)	protein-coding
common_peak1-11128-62-123--0.54344485158479-1.81703281427846	chr15	66577299	66578445	+	0	NA	intron (NM_009375, intron 34 of 47)	intron (NM_009375, intron 34 of 47)	75540	NM_009375	21819	Mm.441333	NM_009375	ENSMUSG00000053469	Tg	Tgn|cog	thyroglobulin	protein-coding
common_peak1-9290-16-23--0.466698858453094-0.497202060940027	chr11	88558009	88558679	+	0	NA	intron (NM_001201341, intron 5 of 7)	intron (NM_001201341, intron 5 of 7)	21199	NM_054043	76626	Mm.400451	NM_054043	ENSMUSG00000069769	Msi2	1700105C15Rik|AI451722|AI563628|AW489193|Msi2h	musashi RNA-binding protein 2	protein-coding
common_peak1-11698-36-48--0.135388757947454-0.322047890816902	chr16	31290311	31291748	+	0	NA	Intergenic	L2c|LINE|L2	-15246	NR_035427	100316676		NR_035427	miRBase:MI0006303	Mir1195	Mirn1195|mmu-mir-1195	microRNA 1195	ncRNA
common_peak1-17217-19-8-1.23276232521937-1.61268301619756	chr6	125430104	125431057	+	0	NA	intron (NM_007657, intron 1 of 7)	intron (NM_007657, intron 1 of 7)	14193	NM_007657	12527	Mm.210676	NM_007657	ENSMUSG00000030342	Cd9	Tspan29	CD9 antigen	protein-coding
common_peak1-12804-21-15-0.569489265266236-0.756118839439552	chr18	65800004	65800658	+	0	NA	intron (NM_207255, intron 3 of 5)	B1_Mur1|SINE|Alu	-57591	NM_177028	319888	Mm.183576	NM_177028	ENSMUSG00000046610	Oacyl	5330437I02Rik|Acyl3	O-acyltransferase like	protein-coding
common_peak2-26360-29-32-0.0678959612566574-0.330208782692001	chr2	38511482	38512420	+	0	NA	Intergenic	Intergenic	-12525	NM_011187	19177	Mm.389251	NM_011187	ENSMUSG00000026750	Psmb7	AU020723|MC14	proteasome (prosome, macropain) subunit, beta type 7	protein-coding
common_peak1-13187-64-47-0.880483900987447-3.04809513566919	chr19	18712179	18713941	+	0	NA	intron (NM_145497, intron 2 of 8)	Charlie4a|DNA|MER1_type	6554	NM_145497	225994	Mm.211595	NM_145497	ENSMUSG00000037847	Nmrk1	AA408380|D630020N23Rik|Nrk1	nicotinamide riboside kinase 1	protein-coding
common_peak1-14837-52-84--0.301130945872003-0.620877707229174	chr3	93554160	93555985	+	0	NA	Intergenic	L1Md_F|LINE|L1	-45248	NM_207272	399675	Mm.377924	NM_207272	ENSMUSG00000060256	Tdpoz4	-	TD and POZ domain containing 4	protein-coding
common_peak1-17667-24-16-0.705747061517378-1.02077663956384	chr7	65429791	65430944	+	0	NA	Intergenic	L1Md_T|LINE|L1	-483205	NM_009728	11982	Mm.135129	NM_009728	ENSMUSG00000025324	Atp10a	Atp10c|pfatp	ATPase, class V, type 10A	protein-coding
common_peak2-27678-43-66--0.283526004934069-0.518477330661964	chr3	116711655	116712749	+	0	NA	Intergenic	MTE2a|LTR|MaLR	-40332	NM_023245	114301	Mm.253736	NM_023245	ENSMUSG00000033377	Palmd	4631423C22Rik|PALML	palmdelphin	protein-coding
common_peak2-21611-18-19--0.00900894365901106-0.306598483909153	chr11	100284502	100285297	+	0	NA	exon (NM_010221, exon 9 of 10)	exon (NM_010221, exon 9 of 10)	7891	NM_001163481	14230	Mm.3894	NM_010221	ENSMUSG00000001555	Fkbp10	AI325255|FKBP-10|FKBP-65|FKBP65|Fkbp-rs1|Fkbp1-rs|Fkbp6|Fkbprp	FK506 binding protein 10	protein-coding
unique_peak2-39558-1-6--2.43441193227435-1.56314192529759	chr9	70284675	70285099	+	0	NA	intron (NM_033604, intron 11 of 14)	ORR1A0-int|LTR|MaLR	-15526	NM_007630	12442	Mm.22592	NM_007630	ENSMUSG00000032218	Ccnb2	CycB2	cyclin B2	protein-coding
common_peak1-7595-148-143-0.747329126199808-5.89156939029198	chr1	57405712	57407516	+	0	NA	Intergenic	Intergenic	27774	NR_037999	75323	Mm.362968	NR_037999	ENSMUSG00000097519	4930558J18Rik	-	RIKEN cDNA 4930558J18 gene	ncRNA
common_peak2-24720-18-36--0.896534214400599-1.30767018140165	chr17	46866798	46867928	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-1249	NM_010321	14711	Mm.29395	NM_010321	ENSMUSG00000002769	Gnmt	-	glycine N-methyltransferase	protein-coding
common_peak2-29055-17-20--0.174021084573723-0.306598483909156	chr5	115631958	115632586	+	0	NA	intron (NM_013879, intron 1 of 6)	intron (NM_013879, intron 1 of 6)	3858	NM_013879	29867	Mm.38551	NM_013879	ENSMUSG00000029544	Cabp1	caldendrin	calcium binding protein 1	protein-coding
unique_peak1-5484-26-7-1.92789909215846-3.64499996644214	chr5	130263846	130264881	+	0	NA	TTS (NM_008095)	TTS (NM_008095)	28766	NM_133900	100678	Mm.271784	NM_133900	ENSMUSG00000029446	Psph	AI480570|PSP|PSPase	phosphoserine phosphatase	protein-coding
common_peak1-14044-12-15--0.351224014912361-0.332077462497413	chr2	118926492	118927066	+	0	NA	intron (NM_029617, intron 21 of 23)	B1_Mur4|SINE|Alu	-11774	NM_011234	19361	Mm.330492	NM_011234		Rad51	AV304093|Rad51a|Reca	RAD51 homolog	protein-coding
common_peak2-23953-14-12-0.198776442216552-0.373562084705529	chr16	15186097	15186623	+	0	NA	Intergenic	RMER17B|LTR|ERVK	279621	NM_025769	66793	Mm.100270	NM_025769		Efcab1	4930449A16Rik|5430404L10Rik	EF hand calcium binding domain 1	protein-coding
unique_peak2-32991-7-13--1.00826409175941-0.697979855752659	chr10	60002543	60003146	+	0	NA	intron (NR_045556, intron 7 of 68)	intron (NR_045556, intron 7 of 68)	140370	NM_001164374	100302688	Mm.444135	NM_001164374	ENSMUSG00000090439	Gm17455	-	predicted gene, 17455	protein-coding
unique_peak2-38108-6-7--0.434601889619698-0.97990265578305	chr6	72229737	72230183	+	0	NA	Intergenic	B3|SINE|B2	-24644	NM_001282071	20388	Mm.46033	NM_147779	ENSMUSG00000056370	Sftpb	AI562151|SF-B|SP-B|Sftp-3|Sftp3	surfactant associated protein B	protein-coding
common_peak2-27823-24-62--1.1840700207322-3.16061338235695	chr3	145924195	145925117	+	0	NA	intron (NM_022983, intron 2 of 2)	intron (NM_022983, intron 2 of 2)	40731	NM_022983	65086	Mm.155520	NM_022983	ENSMUSG00000036832	Lpar3	Edg7|lpA3	lysophosphatidic acid receptor 3	protein-coding
common_peak2-24288-212-326-0.189496765088208-0.987783005344442	chr17	4993665	4997136	+	0	NA	exon (NM_001085355, exon 1 of 20)	exon (NM_001085355, exon 1 of 20)	326	NM_001085355	239985	Mm.133401	NM_001085355	ENSMUSG00000069729	Arid1b	8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235	AT rich interactive domain 1B (SWI-like)	protein-coding
unique_peak1-6037-30-14-1.26278481388335-2.47671208917977	chr6	115269482	115270513	+	0	NA	Intergenic	MIR|SINE|MIR	-41242	NM_001127330	19016	Mm.3020	NM_011146	ENSMUSG00000000440	Pparg	Nr1c3|PPAR-gamma|PPAR-gamma2|PPARgamma|PPARgamma2	peroxisome proliferator activated receptor gamma	protein-coding
common_peak1-9124-14-11-0.314253659636488-0.435191258261915	chr11	74954935	74955666	+	0	NA	intron (NM_001002764, intron 14 of 18)	MIRb|SINE|MIR	26354	NM_001098203	15248	Mm.57250	NM_010430	ENSMUSG00000043099	Hic1	AA408311|HIC-1	hypermethylated in cancer 1	protein-coding
common_peak2-31928-12-9-0.326847890200276-0.459837087125828	chr9	63031098	63031587	+	0	NA	intron (NM_011840, intron 21 of 21)	intron (NM_011840, intron 21 of 21)	-34574	NM_001163758	207667	Mm.36349	NM_172446	ENSMUSG00000022245	Skor1	AV273001|C230094B15Rik|Corl1|Lbxcor1	SKI family transcriptional corepressor 1	protein-coding
common_peak2-31918-17-13-0.410941416147434-0.546772548767014	chr9	61370974	61371692	+	0	NA	Intergenic	RMER1B|Other|Other	151160	NM_001083927	21887	Mm.24255	NM_009389	ENSMUSG00000032280	Tle3	2610103N05Rik|ESG|Grg3a|Grg3b|mKIAA1547	transducin-like enhancer of split 3, homolog of Drosophila E(spl)	protein-coding
unique_peak2-33171-2-60--4.84819159382621-15.1277399922857	chr10	95264704	95266515	+	0	NA	Intergenic	Intergenic	-137688	NM_001001932	216238	Mm.210035	NM_001001932	ENSMUSG00000036499	Eea1	A430109M19Rik|B230358H09Rik|ZFYVE2	early endosome antigen 1	protein-coding
unique_peak1-478-10-6-0.549060422951165-1.21398586181642	chr1	177469791	177470334	+	0	NA	Intergenic	ORR1A3|LTR|MaLR	-47386	NM_001199003	24012	Mm.7956	NM_011880		Rgs7	-	regulator of G protein signaling 7	protein-coding
unique_peak1-2255-7-6--0.00826409175941478-0.97990265578305	chr15	77803528	77804040	+	0	NA	Intergenic	(TTTA)n|Simple_repeat|Simple_repeat	-2530	NM_018749	55944	Mm.3955	NM_018749	ENSMUSG00000016554	Eif3d	66/67kDa|AA407891|Eif3s7|eIF3p66	eukaryotic translation initiation factor 3, subunit D	protein-coding
common_peak1-11300-11-26--1.24619391791185-1.66030262873422	chr15	83563648	83564206	+	0	NA	Intergenic	MTB|LTR|MaLR	-8458	NM_022723	64706	Mm.40393	NM_022723	ENSMUSG00000016763	Scube1	7330410C13Rik|A630023E24Rik	signal peptide, CUB domain, EGF-like 1	protein-coding
common_peak1-10245-24-21-0.333778284130419-0.518921928796332	chr13	54604749	54605464	+	0	NA	promoter-TSS (NM_176987)	promoter-TSS (NM_176987)	-60	NM_176987	319719	Mm.376151	NM_176987	ENSMUSG00000043183	Simc1	4732471D19Rik	SUMO-interacting motifs containing 1	protein-coding
common_peak1-18687-43-19-1.46063509063634-4.27036875499349	chr8	120415689	120417368	+	0	NA	Intergenic	Intergenic	-90699	NM_026758	68533	Mm.181836	NM_026758	ENSMUSG00000031843	Mphosph6	1110001M01Rik|AA536809|C86426	M phase phosphoprotein 6	protein-coding
common_peak2-26566-11-13--0.298661337805991-0.337263207250336	chr2	103282741	103283519	+	0	NA	intron (NM_010125, intron 4 of 6)	intron (NM_010125, intron 4 of 6)	18905	NM_010125	13711	Mm.20888	NM_010125	ENSMUSG00000027186	Elf5	ESE-2|ESE-5|ESE-5.	E74-like factor 5	protein-coding
unique_peak1-1295-10-2-1.77145284428761-2.09384600808989	chr11	119973629	119974194	+	0	NA	intron (NM_024249, intron 11 of 16)	intron (NM_024249, intron 11 of 16)	13663	NM_001110242	208501	Mm.46699	NM_001110242		1810043H04Rik	-	RIKEN cDNA 1810043H04 gene	protein-coding
common_peak1-11209-39-115--1.24221974820842-6.23541776679694	chr15	78842480	78843821	+	0	NA	Intergenic	Intergenic	-1679	NR_045746	100038602	Mm.417074	NR_045746		Gm10865	ENSMUSG00000075558	predicted gene 10865	ncRNA
common_peak1-13894-15-6-1.20480982849805-1.32521814697968	chr2	77169870	77170547	+	0	NA	Intergenic	Intergenic	-51559	NM_175465	228071	Mm.27120	NM_175465	ENSMUSG00000042272	Sestd1	1500031J16Rik|A930010O20|Solo/Trio8	SEC14 and spectrin domains 1	protein-coding
common_peak2-24991-35-65--0.613023860895949-1.28101570649118	chr18	10609280	10610563	+	0	NA	intron (NM_001081222, intron 1 of 10)	CpG	429	NM_001081222	77805	Mm.210996	NM_144542	ENSMUSG00000024293	Esco1	A930014I12Rik	establishment of cohesion 1 homolog 1 (S. cerevisiae)	protein-coding
unique_peak1-507-24-4-2.47128180788035-4.69785539356838	chr1	182088840	182089931	+	0	NA	intron (NM_001033285, intron 34 of 36)	intron (NM_001033285, intron 34 of 36)	34231	NM_001163290	67426	Mm.38330	NM_023341	ENSMUSG00000026489	Adck3	4632432J16Rik|AI462003|Cabc1|mKIAA0451	aarF domain containing kinase 3	protein-coding
unique_peak2-34863-3-9--1.73591118484664-1.57096726280955	chr15	77336812	77337448	+	0	NA	Intergenic	RCHARR1|DNA|MER1_type	-1571	NM_001177533	626615	Mm.390820	NM_001177533	ENSMUSG00000091650	Apol11a	EG626615	apolipoprotein L 11a	protein-coding
common_peak2-21022-27-24-0.347689761120511-0.550049347815233	chr11	31671373	31671923	+	0	NA	Intergenic	Intergenic	52899	NR_102310	414116	Mm.150222	NR_102310	ENSMUSG00000085772	D630024D03Rik	-	RIKEN cDNA D630024D03 gene	ncRNA
common_peak1-18076-37-19-1.20406497659846-2.81179020749331	chr8	39009775	39011342	+	0	NA	intron (NM_145841, intron 2 of 7)	intron (NM_145841, intron 2 of 7)	304698	NR_029884	723860		NR_029884		Mir383	Mirn383|mmu-mir-383	microRNA 383	ncRNA
unique_peak1-3856-11-2-1.92373108353046-2.32232533660526	chr2	6327797	6328379	+	0	NA	intron (NM_181399, intron 4 of 13)	intron (NM_181399, intron 4 of 13)	54306	NM_181399	98910	Mm.40673	NM_181399	ENSMUSG00000039046	Usp6nl	AI316785|RNTRE|TRE2NL|mKIAA0019	USP6 N-terminal like	protein-coding
unique_peak1-3638-11-0-3.50869358425161-3.61235994796777	chr19	38029349	38029913	+	0	NA	intron (NM_001099634, intron 21 of 52)	intron (NM_001099634, intron 21 of 52)	88436	NM_001099634	226101	Mm.34674	NM_177035	ENSMUSG00000048612	Myof	2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3	myoferlin	protein-coding
common_peak1-16393-9-21--1.26981821223308-1.37307999835977	chr5	124220754	124221316	+	0	NA	intron (NM_001042421, intron 18 of 63)	intron (NM_001042421, intron 18 of 63)	21300	NM_001042421	208628	Mm.441089	NM_001042421	ENSMUSG00000029414	Kntc1	D330012D13	kinetochore associated 1	protein-coding
common_peak2-21612-7-5-0.214128329577033-1.01466476204226	chr11	100285312	100285651	+	0	NA	3' UTR (NM_010221, exon 10 of 10)	3' UTR (NM_010221, exon 10 of 10)	8473	NM_001163481	14230	Mm.3894	NM_010221	ENSMUSG00000001555	Fkbp10	AI325255|FKBP-10|FKBP-65|FKBP65|Fkbp-rs1|Fkbp1-rs|Fkbp6|Fkbprp	FK506 binding protein 10	protein-coding
common_peak1-18456-9-16--0.897849434846119-0.732381977911291	chr8	83997544	83998069	+	0	NA	intron (NM_001297596, intron 2 of 24)	intron (NM_001297596, intron 2 of 24)	131345	NM_001297593	234515	Mm.324468	NM_001024617	ENSMUSG00000037940	Inpp4b	E130107I17Rik	inositol polyphosphate-4-phosphatase, type II	protein-coding
unique_peak2-35862-7-13--1.00826409175941-0.697979855752659	chr18	76056498	76057151	+	0	NA	intron (NM_145356, intron 1 of 4)	intron (NM_145356, intron 1 of 4)	76992	NM_145356	207259	Mm.159332	NM_145356	ENSMUSG00000044646	Zbtb7c	B230208J24Rik|Kr-pok|Zbtb36	zinc finger and BTB domain containing 7C	protein-coding
unique_peak1-1302-34-6-2.57471360494366-6.89626809252057	chr11	120187461	120188867	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	20563	NR_105900	102465564		NR_105900		Mir6935	mmu-mir-6935	microRNA mir-6935	ncRNA
common_peak2-28593-36-46--0.0752677655098832-0.303416277109641	chr5	20951003	20952060	+	0	NA	intron (NM_177869, intron 4 of 7)	intron (NM_177869, intron 4 of 7)	20810	NM_177869	330050	Mm.40655	NM_177869	ENSMUSG00000047221	Fam185a	4631428I10|AI847670	family with sequence similarity 185, member A	protein-coding
common_peak1-13960-9-13--0.617741515653384-0.459837087125828	chr2	92008526	92009050	+	0	NA	Intergenic	B3|SINE|B2	-15551	NM_138755	192285	Mm.330408	NM_138755	ENSMUSG00000058318	Phf21a	80kDa|Bhc|Bhc80|D030065N23Rik|PFTF1	PHD finger protein 21A	protein-coding
common_peak1-18439-23-52--1.00615295005412-2.21947156384788	chr8	79711185	79712159	+	0	NA	intron (NM_001083906, intron 6 of 8)	intron (NM_001083906, intron 6 of 8)	285265	NM_001083906	110784	Mm.324393	NM_001083906	ENSMUSG00000031618	Nr3c2	MR|Mlr	nuclear receptor subfamily 3, group C, member 2	protein-coding
common_peak2-20898-10-7-0.356415345008769-1.12966497611638	chr11	4265331	4265725	+	0	NA	intron (NM_029458, intron 10 of 10)	Lx8|LINE|L1	75557	NM_029458	75828	Mm.159592	NM_029458	ENSMUSG00000020419	Hormad2	4930529M09Rik	HORMA domain containing 2	protein-coding
unique_peak2-36202-3-9--1.73591118484664-1.57096726280955	chr2	32848423	32848892	+	0	NA	intron (NM_178888, intron 25 of 28)	intron (NM_178888, intron 25 of 28)	-11081	NM_019488	56017	Mm.305754	NM_019488	ENSMUSG00000026791	Slc2a8	D2Ertd44e|GLUT8|GlutX1	solute carrier family 2, (facilitated glucose transporter), member 8	protein-coding
unique_peak1-941-32-3-3.27909201921966-8.25070305503181	chr11	54223231	54224649	+	0	NA	intron (NM_029105, intron 11 of 13)	L1MB3|LINE|L1	-27741	NM_173753	216742	Mm.34087	NM_173753	ENSMUSG00000035992	Fnip1	A730024A03Rik|AI838773|AW557298	folliculin interacting protein 1	protein-coding
common_peak2-24423-8-18--1.24270509549601-1.15812782348128	chr17	17294434	17294886	+	0	NA	Intergenic	L1Md_F2|LINE|L1	36313	NM_011765	22759	Mm.436633	NM_011765	ENSMUSG00000095990	Zfp97	NGD16-4	zinc finger protein 97	protein-coding
common_peak2-20092-22-23-0.0623216043662485-0.319130838712456	chr1	156617247	156618043	+	0	NA	Intergenic	Intergenic	-44595	NM_009782	12290	Mm.267517	NM_009782	ENSMUSG00000004110	Cacna1e	A430040I15|BII|Cach6|Cacnl1a6|Cav2.3|Cchra1|alpha1E	calcium channel, voltage-dependent, R type, alpha 1E subunit	protein-coding
common_peak1-14794-14-12-0.198776442216552-0.373562084705529	chr3	89901202	89901862	+	0	NA	intron (NM_001271764, intron 8 of 8)	B2_Mm1t|SINE|B2	-6522	NM_029937	77595	Mm.159949	NM_029937	ENSMUSG00000027939	Nup210l	4930548O11Rik|R26-EGFP|Tg(Gt(ROSA)26Sor-EGFP)130910Eps	nucleoporin 210-like	protein-coding
common_peak2-29943-95-116-0.277550625440609-0.870956391174341	chr6	116628214	116629295	+	0	NA	Intergenic	Intergenic	-4900	NM_178045	213391	Mm.257931	NM_178045	ENSMUSG00000042129	Rassf4	3830411C14Rik|AD037|AI586137	Ras association (RalGDS/AF-6) domain family member 4	protein-coding
unique_peak1-2872-10-0-3.35641534500877-3.31132995230379	chr17	35470021	35470609	+	0	NA	Intergenic	Intergenic	-8963	NM_010392	15013	Mm.427969	NM_010392	ENSMUSG00000091705	H2-Q2	BE136769|ENSMUSG00000079507|Gm11132|H-2Q2|gs14-2	histocompatibility 2, Q region locus 2	protein-coding
common_peak1-18703-30-26-0.414787907328405-0.652802052802684	chr8	121897113	121898328	+	0	NA	Intergenic	MuRRS4-int|LTR|ERV1	-21072	NM_019966	56690	Mm.423037	NM_019966	ENSMUSG00000074064	Mlycd	AI324784|Mcd	malonyl-CoA decarboxylase	protein-coding
unique_peak1-6162-7-0-2.79909083029819-2.40823996531185	chr6	140498015	140498536	+	0	NA	intron (NM_144920, intron 11 of 30)	B3|SINE|B2	-72909	NM_178803	11569	Mm.86453	NM_009637	ENSMUSG00000030232	Aebp2	AU023766|B230313N05Rik	AE binding protein 2	protein-coding
common_peak2-25374-16-24--0.525592547506663-0.561823156887258	chr18	82914397	82915182	+	0	NA	Intergenic	Intergenic	13642	NR_045389	76961	Mm.396392	NR_045389		2210420H20Rik	-	RIKEN cDNA 2210420H20 gene	ncRNA
unique_peak1-509-8-2-1.42025991722641-1.65811743852845	chr1	182254754	182255155	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-5653	NM_001081175	320404	Mm.132535	NM_001081175	ENSMUSG00000038855	Itpkb	1110033J02Rik|E130307H12Rik	inositol 1,4,5-trisphosphate 3-kinase B	protein-coding
unique_peak1-1811-12-0-3.64877598508764-4.21441993929574	chr14	27558521	27559115	+	0	NA	Intergenic	Intergenic	-69486	NM_178668	211948	Mm.290758	NM_178668		Pde12	2'-PDE|E430028B21Rik	phosphodiesterase 12	protein-coding
unique_peak1-4630-10-1-2.35641534500877-2.57096726280955	chr3	84002957	84003441	+	0	NA	intron (NM_030706, intron 3 of 11)	intron (NM_030706, intron 3 of 11)	13561	NM_001271728	80890	Mm.44876	NM_030706	ENSMUSG00000027993	Trim2	mKIAA0517|narf	tripartite motif-containing 2	protein-coding
unique_peak1-351-8-2-1.42025991722641-1.65811743852845	chr1	136018040	136018529	+	0	NA	intron (NM_001284524, intron 1 of 10)	intron (NM_001284524, intron 1 of 10)	10465	NM_027979	71884	Mm.328268	NM_027979	ENSMUSG00000026450	Chit1	2300002L19Rik	chitinase 1 (chitotriosidase)	protein-coding
common_peak1-9802-25-27-0.0544949832875021-0.316543811862083	chr12	69296514	69297481	+	0	NA	Intergenic	Intergenic	-526739	NR_033146	100316870	Mm.379794	NR_033146		Gm17821	-	DDB1 and CUL4 associated factor 5 pseudogene	pseudo
common_peak1-10903-32-19-0.957163924332297-1.82978420966174	chr15	3250489	3251726	+	0	NA	exon (NM_001166063, exon 2 of 9)	exon (NM_001166063, exon 2 of 9)	2419	NM_001166063	100039139	Mm.455610	NM_001166063	ENSMUSG00000091119	Ccdc152	ENSMUSG00000071814	coiled-coil domain containing 152	protein-coding
common_peak1-13761-49-62-0.0290038995252671-0.307923848373175	chr2	34801836	34802970	+	0	NA	intron (NM_009421, intron 8 of 10)	intron (NM_009421, intron 8 of 10)	14889	NM_009421	22029	Mm.239514	NM_009421	ENSMUSG00000026875	Traf1	4732496E14Rik	TNF receptor-associated factor 1	protein-coding
common_peak2-22939-3-6--1.22133801201688-1.08602067057793	chr14	47375334	47375750	+	0	NA	Intergenic	MER68-int|LTR|ERVL	-4674	NM_028222	72391	Mm.272394	NM_028222	ENSMUSG00000037628	Cdkn3	2410006H10Rik|KAP	cyclin-dependent kinase inhibitor 3	protein-coding
unique_peak2-38336-1-8--2.79698201165906-2.05605744720049	chr7	19824548	19824975	+	0	NA	intron (NM_207525, intron 1 of 1)	ID_B1|SINE|B4	11023	NM_207525	403187	Mm.239583	NM_207525		Opa3	D630048P19Rik|Gm1425|Gm472	optic atrophy 3	protein-coding
common_peak1-10904-37-24-0.882136881711094-1.82819694957564	chr15	3270367	3271403	+	0	NA	intron (NM_001286370, intron 10 of 10)	(CAAAC)n|Simple_repeat|Simple_repeat	-17359	NM_001166063	100039139	Mm.455610	NM_001166063	ENSMUSG00000091119	Ccdc152	ENSMUSG00000071814	coiled-coil domain containing 152	protein-coding
unique_peak2-37897-4-6--0.830815435910851-0.989110657569874	chr5	142366690	142367201	+	0	NA	intron (NM_177879, intron 5 of 44)	intron (NM_177879, intron 5 of 44)	-510506	NM_199068	17425	Mm.24214	NM_010812	ENSMUSG00000056493	Foxk1	A630048H08Rik|AI463295|ENSMUSG00000075577|Gm10868|Mnf	forkhead box K1	protein-coding
common_peak2-29080-15-10-0.552733131918359-0.604422558181019	chr5	120503008	120503599	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-63219	NM_028762	74111	Mm.41022	NM_028762		Rbm19	1200009A02Rik|AV302714|NPO	RNA binding motif protein 19	protein-coding
common_peak2-27479-49-73--0.203169542603766-0.429508824963706	chr3	93520375	93521295	+	0	NA	Intergenic	RLTR45-int|LTR|ERVK	-40630	NM_148949	207213	Mm.425165	NM_148949	ENSMUSG00000094084	Tdpoz1	2cpoz56|Mapp2|Spopl1	TD and POZ domain containing 1	protein-coding
unique_peak2-37316-5-5--0.289342836727009-0.909929411522249	chr4	126096581	126097005	+	0	NA	intron (NM_153402, intron 1 of 18)	B1_Mus1|SINE|Alu	9993	NM_153402	214150	Mm.440915	NM_153402		Ago3	AW048688|C130014L07Rik|Eif2c3	argonaute RISC catalytic subunit 3	protein-coding
unique_peak1-6159-6-3-0.565398110380302-1.08602067057793	chr6	137565038	137565464	+	0	NA	intron (NM_007945, intron 1 of 21)	intron (NM_007945, intron 1 of 21)	32555	NM_001271588	13860	Mm.235346	NM_007945	ENSMUSG00000015766	Eps8	AW261790	epidermal growth factor receptor pathway substrate 8	protein-coding
unique_peak2-39405-1-8--2.79698201165906-2.05605744720049	chr9	34279586	34280042	+	0	NA	Intergenic	Intergenic	-16502	NM_026324	67703	Mm.220710	NM_026324		Kirrel3	1500010O20Rik|2900036G11Rik|NEPH2|SST4|mKIAA1867	kin of IRRE like 3 (Drosophila)	protein-coding
common_peak2-25491-11-12--0.191746133889479-0.310474156842889	chr19	5088538	5089148	+	0	NA	intron (NM_026553, intron 1 of 7)	intron (NM_026553, intron 1 of 7)	305	NM_026553	68090	Mm.44202	NM_026553	ENSMUSG00000024875	Yif1a	5330422J23Rik|54TM|Yif1|Yif1p	Yip1 interacting factor homolog A (S. cerevisiae)	protein-coding
unique_peak1-3143-10-3-1.35641534500877-1.75805390616669	chr18	36423217	36423689	+	0	NA	Intergenic	B2_Mm1a|SINE|B2	-17363	NM_008989	19290	Mm.231802	NM_008989		Pura	CAGER-1|Pur-alpha|ssCRE-BP	purine rich element binding protein A	protein-coding
common_peak2-28426-12-12--0.0516637330534535-0.309718203022949	chr4	148087469	148088173	+	0	NA	Intergenic	Intergenic	70395	NM_001085505	230909	Mm.332067	NM_001085505	ENSMUSG00000070577	Gm572	b2b1167Clo	predicted gene 572	protein-coding
unique_peak1-4373-11-5-0.923731083530457-1.477227296591	chr2	157445569	157446104	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-53739	NM_016916	53619	Mm.480461	NM_016916	ENSMUSG00000067787	Blcap	AI462828|Bc10	bladder cancer associated protein homolog (human)	protein-coding
unique_peak1-4192-13-2-2.19350952991661-3.03832868024006	chr2	117780896	117781660	+	0	NA	Intergenic	Intergenic	133614	NR_040631	73938	Mm.399107	NR_040631	ENSMUSG00000086221	4930412B13Rik	-	RIKEN cDNA 4930412B13 gene	ncRNA
unique_peak1-1582-9-1-2.18961340640422-2.31132995230379	chr13	32961099	32961627	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-18309	NM_025429	66222	Mm.20144	NM_025429	ENSMUSG00000044734	Serpinb1a	1190005M04Rik|AI325983|EI|EIA|ELANH2|LEI|M/NEI|MNEI|PI2	serine (or cysteine) peptidase inhibitor, clade B, member 1a	protein-coding
common_peak1-8205-9-3-1.18961340640422-1.57096726280955	chr10	5208413	5209007	+	0	NA	intron (NM_001079686, intron 16 of 54)	L1Md_F|LINE|L1	56876	NM_001079686	64009	Mm.331626	NM_022027	ENSMUSG00000019769	Syne1	8B|A330049M09Rik|BE692247|C130039F11Rik|CPG2|Myne1|mKIAA1756	spectrin repeat containing, nuclear envelope 1	protein-coding
unique_peak1-2249-12-6-0.841421063030034-1.58711810488664	chr15	77338080	77338773	+	0	NA	promoter-TSS (NM_001177533)	promoter-TSS (NM_001177533)	-275	NM_001177533	626615	Mm.390820	NM_001177533	ENSMUSG00000091650	Apol11a	EG626615	apolipoprotein L 11a	protein-coding
common_peak2-28562-58-133--0.770139255567275-3.32099502010001	chr5	5419686	5421228	+	0	NA	Intergenic	Intergenic	-40206	NM_011074	18647	Mm.389061	NM_011074	ENSMUSG00000028926	Cdk14	Pftk1|mKIAA0834	cyclin-dependent kinase 14	protein-coding
unique_peak1-7221-10-2-1.77145284428761-2.09384600808989	chr9	70820065	70820680	+	0	NA	Intergenic	RMER5|LTR|ERV1	-37757	NM_008280	15450	Mm.390187	NM_008280	ENSMUSG00000032207	Lipc	AI256194|HL|Hpl	lipase, hepatic	protein-coding
common_peak1-16158-75-75-0.4911394782997-1.52915555991989	chr5	77265470	77266915	+	0	NA	Intergenic	RLTR17|LTR|ERVK	-3432	NM_001163793	320827	Mm.101504	NM_001163793	ENSMUSG00000036377	C530008M17Rik	2810489J07Rik|4930529A19Rik|4931405B09Rik|Kiaa1211|mKIAA1211	RIKEN cDNA C530008M17 gene	protein-coding
common_peak1-7583-24-31--0.206790097232283-0.334168439396943	chr1	53784176	53784958	+	0	NA	Intergenic	Intergenic	-20939	NM_001252070	627872	Mm.184692	NM_001252070	ENSMUSG00000096141	Dnah7a	Dnahc7|Dnahc7a|Gm992	dynein, axonemal, heavy chain 7A	protein-coding
unique_peak2-34470-4-7--1.02346051385325-1.09384600808989	chr14	31667760	31668149	+	0	NA	intron (NM_028839, intron 1 of 7)	MT2A|LTR|ERVL	-24489	NM_181390	66175	Mm.220895	NM_181390	ENSMUSG00000042485	Mustn1	1110028G01Rik|Mustang	musculoskeletal, embryonic nuclear protein 1	protein-coding
common_peak1-9550-19-31--0.597312673338314-0.721233599456203	chr11	117091803	117092421	+	0	NA	intron (NM_001113486, intron 2 of 11)	intron (NM_001113486, intron 2 of 11)	31137	NM_001113486	53860	Mm.38450	NM_017380	ENSMUSG00000059248	Sept9	MSF1|Msf|PNUTL4|Sint1	septin 9	protein-coding
common_peak2-30928-13-13--0.0288828914198356-0.309074325783021	chr7	144982515	144983075	+	0	NA	Intergenic	Intergenic	353438	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
unique_peak2-37248-15-17--0.157760250886656-0.307611222530528	chr4	99929358	99930398	+	0	NA	intron (NM_013845, intron 1 of 8)	intron (NM_013845, intron 1 of 8)	161482	NM_013845	26563	Mm.57252	NM_013845	ENSMUSG00000035305	Ror1	2810404D04Rik|Ntrkr1|mRor1	receptor tyrosine kinase-like orphan receptor 1	protein-coding
common_peak1-8587-15-7-1.01216475055566-1.08658567012551	chr10	99913123	99913801	+	0	NA	intron (NM_001033332, intron 11 of 12)	intron (NM_001033332, intron 11 of 12)	36519	NM_001033332	237500	Mm.296805	NM_001033332	ENSMUSG00000036676	Tmtc3	9130014E20Rik|B130008E12Rik|mSmile	transmembrane and tetratricopeptide repeat containing 3	protein-coding
common_peak2-24293-12-12--0.0516637330534535-0.309718203022949	chr17	15564493	15565067	+	0	NA	intron (NR_033586, intron 9 of 10)	intron (NR_033586, intron 9 of 10)	31570	NM_024203	67544	Mm.35039	NM_024203	ENSMUSG00000014763	Fam120b	4932442K08Rik|AW049283|AW413338|CCPG|Pgcc1|mKIAA1838	family with sequence similarity 120, member B	protein-coding
common_peak2-27477-8-17--1.16470258349474-1.02063122982878	chr3	92246610	92247008	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-4108	NM_009265	20754	Mm.140151	NM_009265	ENSMUSG00000048455	Sprr1b	-	small proline-rich protein 1B	protein-coding
common_peak2-21319-31-47--0.359723829908033-0.560152715697887	chr11	75461600	75462452	+	0	NA	3' UTR (NM_008916, exon 12 of 12)	3' UTR (NM_008916, exon 12 of 12)	-2985	NM_008659	17913	Mm.234502	NM_008659	ENSMUSG00000017774	Myo1c	C80397|MMIb|MYO1E|NMI|mm1beta|myr2	myosin IC	protein-coding
common_peak1-18815-10-19--0.965512749878593-0.917676348953458	chr9	115310460	115310938	+	0	NA	Intergenic	Intergenic	65420	NR_040730	73856	Mm.399156	NR_040730		4930428G15Rik	-	RIKEN cDNA 4930428G15 gene	ncRNA
common_peak1-9071-59-55-0.518009078814974-1.31216754501451	chr11	69394796	69396448	+	0	NA	intron (NM_001127233, intron 1 of 10)	intron (NM_001127233, intron 1 of 10)	1761	NM_001127233	22059	Mm.222	NM_011640	ENSMUSG00000059552	Trp53	Tp53|bbl|bfy|bhy|p44|p53	transformation related protein 53	protein-coding
common_peak2-28010-11-19--0.813234510635749-0.769930178837768	chr4	46450378	46450930	+	0	NA	Intergenic	Intergenic	-13335	NM_130889	67628	Mm.263913	NM_130889	ENSMUSG00000028333	Anp32b	2410015B15Rik|PAL31|PHAPI2a|Ssp29	acidic (leucine-rich) nuclear phosphoprotein 32 family, member B	protein-coding
common_peak1-11172-11-21--0.950738034385684-0.991115276827166	chr15	76343445	76344107	+	0	NA	Intergenic	Intergenic	-1528	NM_010046	13350	Mm.22633	NM_010046	ENSMUSG00000022555	Dgat1	ARAT|C75990|D15Ertd23e|Dgat	diacylglycerol O-acyltransferase 1	protein-coding
common_peak2-26217-42-41-0.350011905088423-0.688538237251116	chr2	26603537	26604424	+	0	NA	Intergenic	Intergenic	-77178	NM_010695	16821	Mm.123925	NM_010695	ENSMUSG00000026919	Lcn4	A630045M08Rik|Vnsp2	lipocalin 4	protein-coding
common_peak2-31358-18-7-1.31291915122835-1.71830443967823	chr8	84749861	84750359	+	0	NA	Intergenic	Intergenic	176375	NM_001254747	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak2-26314-20-21-0.0286431659538957-0.306080386793804	chr2	32714526	32715303	+	0	NA	Intergenic	Intergenic	-12157	NM_001113569	20910	Mm.278865	NM_009295	ENSMUSG00000026797	Stxbp1	AI317162|AI326233|MMS10-G|Ms10g|Munc-18a|Munc18-1|N-sec1|Rb-sec1|Sxtbp1|Unc18-1|Unc18h|nsec1	syntaxin binding protein 1	protein-coding
unique_peak1-4349-7-6--0.00826409175941478-0.97990265578305	chr2	155050378	155050849	+	0	NA	3' UTR (NM_008395, exon 25 of 25)	3' UTR (NM_008395, exon 25 of 25)	-11656	NR_111891	67068	Mm.23693	NM_025947	ENSMUSG00000047459	Dynlrb1	2010012N15Rik|2010320M17Rik|9430076K19Rik|AV124457|DNLC2A|Dncl2a|km23-1	dynein light chain roadblock-type 1	protein-coding
common_peak2-19753-16-26--0.636623859895407-0.713114929964887	chr1	75478703	75479623	+	0	NA	exon (NM_177056, exon 3 of 5)	exon (NM_177056, exon 3 of 5)	3056	NM_177056	319998	Mm.44401	NM_177056	ENSMUSG00000051703	Tmem198	A230078I05Rik|Tmem198-1|Tmem198a	transmembrane protein 198	protein-coding
common_peak2-20904-22-43--0.812147513549893-1.34810744351377	chr11	4594079	4594784	+	0	NA	Intergenic	Intergenic	9916	NM_197979	66152	Mm.269736	NM_197979	ENSMUSG00000059534	Uqcr10	1110020P15Rik|AA960494|Ucrc	ubiquinol-cytochrome c reductase, complex III subunit X	protein-coding
common_peak2-22924-12-19--0.673152109799724-0.546772548767014	chr14	46634866	46635691	+	0	NA	Intergenic	Intergenic	-68424	NR_002875	218963	Mm.282093	NR_002875		Gm1821	-	ubiquitin pseudogene	pseudo
common_peak2-21600-5-5--0.289342836727009-0.909929411522249	chr11	99108685	99109121	+	0	NA	Intergenic	Intergenic	-3522	NM_172946	268481	Mm.133193	NM_172946	ENSMUSG00000035849	Krt222	6330509G02Rik	keratin 222	protein-coding
common_peak1-18972-15-15-0.0121647505556561-0.30803596071496	chr9	55937589	55938187	+	0	NA	5' UTR (NM_011193, exon 1 of 15)	5' UTR (NM_011193, exon 1 of 15)	105	NM_011193	19200	Mm.2534	NM_011193	ENSMUSG00000032322	Pstpip1	CD2BP1|def-2	proline-serine-threonine phosphatase-interacting protein 1	protein-coding
unique_peak1-6929-10-1-2.35641534500877-2.57096726280955	chr8	107210486	107210995	+	0	NA	Intergenic	RLTR20A|LTR|ERVK	-45112	NM_026753	68523	Mm.279	NM_026753	ENSMUSG00000031879	Fam96b	1110019N10Rik	family with sequence similarity 96, member B	protein-coding
unique_peak2-37957-7-6--0.00826409175941478-0.97990265578305	chr5	151332452	151332997	+	0	NA	intron (NM_001081001, intron 3 of 26)	intron (NM_001081001, intron 3 of 26)	7528	NM_001081001	12190	Mm.236256	NM_009765	ENSMUSG00000041147	Brca2	Fancd1|RAB163	breast cancer 2	protein-coding
unique_peak1-4699-12-1-2.64877598508764-3.36932189928148	chr3	98378845	98379529	+	0	NA	Intergenic	Intergenic	-11226	NM_008294	15495	Mm.14309	NM_008294	ENSMUSG00000095143	Hsd3b4	-	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 4	protein-coding
common_peak1-7991-48-29-1.0640365556263-3.09530603560454	chr1	162132342	162134347	+	0	NA	3' UTR (NM_009786, exon 6 of 6)	3' UTR (NM_009786, exon 6 of 6)	7953	NM_025474	64659	Mm.29599	NM_025474		Mrps14	1810032L21Rik|AL022847|Rpms14	mitochondrial ribosomal protein S14	protein-coding
common_peak1-12416-24-37--0.454717610675869-0.572500200098104	chr17	74338594	74339581	+	0	NA	Intergenic	MIR|SINE|MIR	-39551	NM_011723	22436	Mm.11223	NM_011723	ENSMUSG00000024066	Xdh	XO|Xor|Xox-1|Xox1	xanthine dehydrogenase	protein-coding
common_peak2-20214-21-29--0.337401330342283-0.403610417161439	chr1	179545598	179546948	+	0	NA	Intergenic	Intergenic	26801	NR_037994	75589	Mm.86666	NR_037994		2310043L19Rik	-	RIKEN cDNA 2310043L19 gene	ncRNA
unique_peak2-39892-2-4--1.23938235115068-0.931118710592187	chrX	77219155	77219538	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-302572	NM_028025	71967	Mm.379207	NM_028025	ENSMUSG00000046942	Mageb16	2410003J06Rik	melanoma antigen family B, 16	protein-coding
unique_peak2-37230-6-7--0.434601889619698-0.97990265578305	chr4	88934780	88935125	+	0	NA	intron (NM_009877, intron 1 of 2)	intron (NM_009877, intron 1 of 2)	5571	NM_009877	12578	Mm.4733	NM_009877	ENSMUSG00000044303	Cdkn2a	ARF-INK4a|Arf|INK4a-ARF|Ink4a/Arf|MTS1|Pctr1|p16|p16(INK4a)|p16INK4a|p19<ARF>|p19ARF	cyclin-dependent kinase inhibitor 2A	protein-coding
common_peak2-29950-6-12--1.13504160776079-1.45089835786865	chr6	116651289	116651871	+	0	NA	intron (NM_178768, intron 2 of 4)	(TGGA)n|Simple_repeat|Simple_repeat	15196	NM_178768	319776	Mm.133120	NM_178768	ENSMUSG00000048108	Tmem72	C230095G01Rik	transmembrane protein 72	protein-coding
unique_peak2-34566-4-5--0.608423014574403-0.909929411522249	chr14	65899392	65899812	+	0	NA	intron (NM_015795, intron 2 of 7)	MERVL-int|LTR|ERVL	14064	NM_015795	50759	Mm.65308	NM_015795	ENSMUSG00000034532	Fbxo16	4932435C24Rik|Fbx16	F-box protein 16	protein-coding
common_peak1-8564-32-52--0.448828435343539-0.705686442909787	chr10	94687892	94689204	+	0	NA	intron (NM_009950, intron 2 of 2)	intron (NM_009950, intron 2 of 2)	98183	NM_009950	12905	Mm.473739	NM_009950	ENSMUSG00000045867	Cradd	RAIDD	CASP2 and RIPK1 domain containing adaptor with death domain	protein-coding
common_peak1-10148-17-23--0.366666162516118-0.383878263347744	chr13	34993303	34994113	+	0	NA	3' UTR (NM_013830, exon 15 of 15)	3' UTR (NM_013830, exon 15 of 15)	18153	NM_027967	71864	Mm.380836	NM_027967	ENSMUSG00000021414	Fam217a	1700026J04Rik	family with sequence similarity 217, member A	protein-coding
unique_peak2-35974-7-8--0.370834171144123-1.00793137938329	chr19	21106717	21107158	+	0	NA	Intergenic	Intergenic	-78245	NM_028953	13409	Mm.219585	NM_028953	ENSMUSG00000024749	Tmc1	4933416G09Rik|Beethoven|Bth|CWEA1|dn	transmembrane channel-like gene family 1	protein-coding
unique_peak2-39560-2-5--1.50241675698448-1.08602067057793	chr9	70816235	70816654	+	0	NA	Intergenic	Intergenic	-33829	NM_008280	15450	Mm.390187	NM_008280	ENSMUSG00000032207	Lipc	AI256194|HL|Hpl	lipase, hepatic	protein-coding
unique_peak2-34478-7-4-0.477162735410827-1.09384600808989	chr14	34087445	34087805	+	0	NA	intron (NM_153800, intron 3 of 10)	intron (NM_153800, intron 3 of 10)	57616	NM_153800	239027	Mm.318350	NM_153800	ENSMUSG00000063506	Arhgap22	B230341L19Rik|RHOGAP2|p68RacGAP	Rho GTPase activating protein 22	protein-coding
common_peak2-27011-49-45-0.482721866968171-1.0238927023692	chr2	173257570	173259274	+	0	NA	Intergenic	RSINE1|SINE|B4	-89671	NM_028158	72221	Mm.46132	NM_028158	ENSMUSG00000027518	1700021F07Rik	-	RIKEN cDNA 1700021F07 gene	protein-coding
common_peak1-12885-66-130--0.514939337111609-1.72044462070598	chr18	80150821	80151915	+	0	NA	Intergenic	ORR1A1|LTR|MaLR	-92266	NM_053117	93737	Mm.24678	NM_053117	ENSMUSG00000056214	Pard6g	2410049N21Rik|Par6a	par-6 family cell polarity regulator gamma	protein-coding
common_peak2-23288-60-63-0.354291861620531-0.843209553910341	chr15	31184681	31186149	+	0	NA	intron (NM_146057, intron 2 of 3)	intron (NM_146057, intron 2 of 3)	31275	NM_146057	223453	Mm.222867	NM_146057	ENSMUSG00000039168	Dap	4921531N22Rik|AI789753|AU040360	death-associated protein	protein-coding
unique_peak2-34777-4-6--0.830815435910851-0.989110657569874	chr15	59597922	59598263	+	0	NA	Intergenic	IAP-d-int|LTR|ERVK	28422	NR_045076	100503021	Mm.402924	NR_045076		Gm19510	-	predicted gene, 19510	ncRNA
common_peak1-17465-12-20--0.743541437691122-0.625923329873571	chr7	19572815	19573361	+	0	NA	exon (NM_194064, exon 1 of 1)	exon (NM_194064, exon 1 of 1)	215	NM_194064	378430	Mm.277153	NM_194064	ENSMUSG00000051965	Nanos2	nos2	nanos homolog 2 (Drosophila)	protein-coding
common_peak2-32195-103-179--0.203855350469635-0.644198074451427	chr9	119321544	119323446	+	0	NA	intron (NM_007397, intron 1 of 9)	MurERV4-int|LTR|ERVK	10876	NM_007397	11481	Mm.390239	NM_007397	ENSMUSG00000061393	Acvr2b	ActRIIB	activin receptor IIB	protein-coding
unique_peak1-1907-16-9-0.796335547380699-0.844317084070804	chr14	69707070	69707613	+	0	NA	Intergenic	Intergenic	59995	NM_009285	20855	Mm.20911	NM_009285	ENSMUSG00000014813	Stc1	Stc	stanniocalcin 1	protein-coding
unique_peak2-39207-0-6--3.64748585253182-1.56314192529759	chr8	105862480	105862785	+	0	NA	Intergenic	Intergenic	8802	NR_036588	69794	Mm.396139	NR_036588		1600027J07Rik	-	RIKEN cDNA 1600027J07 gene	ncRNA
unique_peak2-32775-5-8--0.874305337448166-1.10484139239135	chr1	177702471	177702912	+	0	NA	intron (NM_029453, intron 14 of 27)	(TCTCTG)n|Simple_repeat|Simple_repeat	73967	NM_029453	75820	Mm.50361	NM_029453	ENSMUSG00000026523	Wdr64	4930415O10Rik|4930511H01Rik	WD repeat domain 64	protein-coding
unique_peak1-6887-6-3-0.565398110380302-1.08602067057793	chr8	93981252	93981728	+	0	NA	intron (NM_011936, intron 4 of 8)	intron (NM_011936, intron 4 of 8)	144066	NM_011936	26383	Mm.4375	NM_011936	ENSMUSG00000055932	Fto	AW743446|mKIAA1752	fat mass and obesity associated	protein-coding
unique_peak2-37921-2-5--1.50241675698448-1.08602067057793	chr5	144935763	144936082	+	0	NA	exon (NM_001081109, exon 11 of 14)	exon (NM_001081109, exon 11 of 14)	-15233	NM_010800	17341	Mm.386767	NM_010800	ENSMUSG00000052271	Bhlha15	1810009C13Rik|Bhlhb8|MIST-1|Mist1	basic helix-loop-helix family, member a15	protein-coding
common_peak1-18857-57-88--0.209700390887469-0.460389472422342	chr9	21025433	21026991	+	0	NA	Intergenic	B3|SINE|B2	17564	NM_016679	50868	Mm.248266	NM_016679	ENSMUSG00000003308	Keap1	INRF2|mKIAA0132	kelch-like ECH-associated protein 1	protein-coding
common_peak2-30299-5-10--1.16381195464315-1.33892459842472	chr7	19508049	19508353	+	0	NA	Intergenic	Intergenic	-3036	NM_001029877	384569	Mm.262724	NM_001029877	ENSMUSG00000030411	Nova2	Gm1424	neuro-oncological ventral antigen 2	protein-coding
common_peak2-29653-27-12-1.29110623275414-2.3494062982954	chr6	71143918	71144387	+	0	NA	Intergenic	Intergenic	-5730	NM_017399	14080	Mm.22126	NM_017399	ENSMUSG00000054422	Fabp1	Fabpl|L-FABP	fatty acid binding protein 1, liver	protein-coding
common_peak1-17169-30-14-1.26278481388335-2.47671208917977	chr6	120191386	120192756	+	0	NA	intron (NM_198884, intron 1 of 19)	B3A|SINE|B2	52506	NM_198884	330406	Mm.321840	NM_198884	ENSMUSG00000041372	B4galnt3	AB114826|B4GalNAcT3|C330047A21	beta-1,4-N-acetyl-galactosaminyl transferase 3	protein-coding
unique_peak1-4707-42-12-2.04188960972609-6.57854794673522	chr3	101527841	101529754	+	0	NA	Intergenic	Intergenic	111349	NM_172295	242125	Mm.32900	NM_172295	ENSMUSG00000044313	Mab21l3	-	mab-21-like 3 (C. elegans)	protein-coding
unique_peak2-33031-2-5--1.50241675698448-1.08602067057793	chr10	69757113	69757509	+	0	NA	Intergenic	ORR1B2|LTR|MaLR	49287	NM_025807	66859	Mm.19325	NM_025807	ENSMUSG00000037762	Slc16a9	1200003C15Rik|4930425B13Rik|AI552636	solute carrier family 16 (monocarboxylic acid transporters), member 9	protein-coding
common_peak1-11671-6-7--0.434601889619698-0.97990265578305	chr16	25427073	25427568	+	0	NA	Intergenic	Intergenic	140417	NM_175165	71338	Mm.126851	NM_175165	ENSMUSG00000048399	Tprg	5430420C16Rik|Tprg1	transformation related protein 63 regulated	protein-coding
common_peak2-21265-9-18--1.05831410703937-0.965105923112245	chr11	69681460	69682002	+	0	NA	Intergenic	RMER10B|LTR|ERVL	-9499	NM_031880	83813	Mm.28874	NM_031880	ENSMUSG00000001583	Tnk1	Kos1|Tnk1a|Tnk1b	tyrosine kinase, non-receptor, 1	protein-coding
unique_peak2-36203-2-10--2.37688587490062-2.09384600808989	chr2	32875556	32876016	+	0	NA	intron (NM_178888, intron 14 of 28)	intron (NM_178888, intron 14 of 28)	-38210	NM_019488	56017	Mm.305754	NM_019488	ENSMUSG00000026791	Slc2a8	D2Ertd44e|GLUT8|GlutX1	solute carrier family 2, (facilitated glucose transporter), member 8	protein-coding
unique_peak1-7104-44-9-2.49996473968117-8.75215932200936	chr9	43115648	43116835	+	0	NA	Intergenic	Intergenic	-2605	NM_023655	72169	Mm.273277	NM_023655	ENSMUSG00000032013	Trim29	1110047J21Rik|2810431N19Rik|4732461M22Rik|AI119726	tripartite motif-containing 29	protein-coding
unique_peak2-33338-3-4--0.73591118484664-0.864171920961574	chr11	20809636	20809937	+	0	NA	Intergenic	Intergenic	-78675	NM_173752	216551	Mm.76694	NM_173752	ENSMUSG00000042363	Lgalsl	1110067D22Rik|A530071M23|Grpa|Hspc159|Lgalsla	lectin, galactoside binding-like	protein-coding
common_peak1-9331-36-45--0.0442408698892587-0.301029995663982	chr11	95712779	95713824	+	0	NA	Intergenic	Intergenic	-6830	NR_045187	73906	Mm.399894	NR_045187	ENSMUSG00000086015	4833417C18Rik	-	RIKEN cDNA 4833417C18 gene	ncRNA
common_peak2-25522-37-18-1.27806555804223-3.05319673240193	chr19	5801749	5802260	+	0	NA	non-coding (NR_002847, exon 1 of 1)	non-coding (NR_002847, exon 1 of 1)	667	NR_002847	72289	Mm.298256	NR_002847	ENSMUSG00000092341	Malat1	2210401K01Rik|9430072K23Rik|AI647968|Neat2	metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)	ncRNA
common_peak2-20560-55-108--0.563564453624224-1.68840944590783	chr10	72654072	72655831	+	0	NA	Intergenic	Intergenic	-105498	NR_040646	327768	Mm.417745	NR_040646		A330049N07Rik	-	RIKEN cDNA A330049N07 gene	ncRNA
common_peak1-11780-93-118-0.216252100198325-0.640668551303165	chr16	45842910	45845288	+	0	NA	intron (NM_153412, intron 1 of 17)	intron (NM_153412, intron 1 of 17)	392	NM_153412	208177	Mm.211477	NM_153412	ENSMUSG00000033149	Phldb2	AV253284|C820004H04Rik|LL5b|LL5beta	pleckstrin homology-like domain, family B, member 2	protein-coding
common_peak2-21652-20-19-0.16614668970383-0.348739088570342	chr11	102316850	102317555	+	0	NA	intron (NM_010575, intron 28 of 29)	CpG	-8225	NM_199200	217219	Mm.259924	NM_199200	ENSMUSG00000034685	Fam171a2	-	family with sequence similarity 171, member A2	protein-coding
common_peak2-22796-23-23-0.136805003787924-0.340939137447793	chr14	8080178	8080892	+	0	NA	Intergenic	Intergenic	-73488	NM_001270812	100861615	Mm.488431	NM_001270812	ENSMUSG00000079396	LOC100861615	-	alpha takusan-like	protein-coding
unique_peak2-37720-2-9--2.23938235115068-1.87199725847353	chr5	105691282	105691708	+	0	NA	Intergenic	Intergenic	-22943	NM_001039646	626578	Mm.275893	NM_001039646	ENSMUSG00000054588	Gbp10	-	guanylate-binding protein 10	protein-coding
unique_peak1-6914-27-10-1.53211433225794-2.93261892307636	chr8	106054065	106055121	+	0	NA	Intergenic	Intergenic	-73106	NR_045730	71058	Mm.67707	NR_045730		4933400L20Rik	-	RIKEN cDNA 4933400L20 gene	ncRNA
unique_peak2-37868-9-18--1.05831410703937-0.965105923112245	chr5	137628191	137628852	+	0	NA	Intergenic	Intergenic	-36444	NM_201373	384309	Mm.100647	NM_201373		Trim56	A130009K11Rik|Gm452|RNF109	tripartite motif-containing 56	protein-coding
unique_peak1-4448-9-5-0.604650905683064-1.21398586181642	chr2	173233289	173233834	+	0	NA	Intergenic	Intergenic	-114532	NM_028158	72221	Mm.46132	NM_028158	ENSMUSG00000027518	1700021F07Rik	-	RIKEN cDNA 1700021F07 gene	protein-coding
unique_peak1-6969-8-0-3.00522241794757-2.70926996097583	chr8	117338428	117339001	+	0	NA	intron (NM_019573, intron 8 of 8)	CT-rich|Low_complexity|Low_complexity	375162	NM_019573	80707	Mm.440420	NM_019573	ENSMUSG00000004637	Wwox	5330426P09Rik|9030416C10Rik|WOX1	WW domain-containing oxidoreductase	protein-coding
common_peak1-8880-22-18-0.399356591643819-0.549581527953406	chr11	44470592	44471363	+	0	NA	intron (NM_001290710, intron 6 of 14)	intron (NM_001290710, intron 6 of 14)	39375	NM_001290710	13591	Mm.439662	NM_007897		Ebf1	Ebf|O/E-1|OE-1|Olf-1|Olf1	early B cell factor 1	protein-coding
unique_peak1-2291-6-0-2.5653981103803-2.10720996964787	chr15	80148801	80149325	+	0	NA	intron (NM_001044308, intron 2 of 36)	intron (NM_001044308, intron 2 of 36)	31395	NM_001044308	239556	Mm.291058	NM_001044308	ENSMUSG00000022416	Cacna1i	Ca(V)3.3	calcium channel, voltage-dependent, alpha 1I subunit	protein-coding
common_peak2-31369-29-31-0.112290080615111-0.353704024845522	chr8	84981672	84983202	+	0	NA	Intergenic	B3A|SINE|B2	-55952	NM_008357	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak2-23240-24-36--0.416243462861233-0.518746288394493	chr15	9071201	9072365	+	0	NA	intron (NM_177178, intron 1 of 17)	intron (NM_177178, intron 1 of 17)	1457	NM_177178	320506	Mm.259886	NM_177178	ENSMUSG00000039704	Lmbrd2	9930036E21Rik	LMBR1 domain containing 2	protein-coding
common_peak2-31122-12-17--0.521149016354673-0.417187467413082	chr8	33903356	33904174	+	0	NA	Intergenic	Intergenic	156733	NM_001177589	100042715	Mm.291093	NM_001177589		Gm3985	-	predicted gene 3985	protein-coding
common_peak1-13512-26-20-0.535581669379702-0.738267116931592	chr2	94437325	94438127	+	0	NA	Intergenic	Lx3A|LINE|L1	-159422	NM_007466	11800	Mm.181824	NM_007466	ENSMUSG00000027193	Api5	AAC-11|AI196452	apoptosis inhibitor 5	protein-coding
common_peak2-26758-7-11--0.785871670422967-1.21681515183528	chr2	139840835	139841255	+	0	NA	intron (NR_110352, intron 3 of 12)	intron (NR_110352, intron 3 of 12)	51496	NM_001159640	75812	Mm.293449	NM_175225	ENSMUSG00000039033	Tasp1	4930485D02Rik|AW986064	taspase, threonine aspartase 1	protein-coding
common_peak1-10581-94-102-0.443089040666098-1.60211289375194	chr14	26637981	26639338	+	0	NA	Intergenic	Intergenic	-22982	NM_013469	11744	Mm.294083	NM_013469	ENSMUSG00000021866	Anxa11	A830099O17Rik|Anx11	annexin A11	protein-coding
unique_peak1-2841-12-6-0.841421063030034-1.58711810488664	chr17	28909078	28909689	+	0	NA	intron (NM_011950, intron 3 of 11)	intron (NM_011950, intron 3 of 11)	3121	NM_011950	26415	Mm.27970	NM_011950	ENSMUSG00000004864	Mapk13	SAPK4|Serk4	mitogen-activated protein kinase 13	protein-coding
common_peak1-19360-44-80--0.517957168316089-1.14348743388917	chrX	13070526	13072189	+	0	NA	Intergenic	RLTR28B|LTR|ERVL	26559	NM_173415	236690	Mm.90233	NM_173415	ENSMUSG00000051228	Nyx	CLNP|CSNB1|CSNB4|nob	nyctalopin	protein-coding
unique_peak2-37099-2-13--2.72480917832092-2.79529063155376	chr3	157513624	157514261	+	0	NA	Intergenic	Intergenic	74085	NM_145953	107869	Mm.28301	NM_145953	ENSMUSG00000028179	Cth	0610010I13Rik|AI314617|BC019483|CSE|Cys3	cystathionase (cystathionine gamma-lyase)	protein-coding
common_peak2-30331-10-15--0.643584654991231-0.519648556297791	chr7	25218855	25219549	+	0	NA	intron (NM_199013, intron 2 of 2)	B1F|SINE|Alu	11499	NM_199013	210145	Mm.33811	NM_199013	ENSMUSG00000062028	Irgc1	F630044M05Rik|Gm1102|Gm474|Ifgge|Iigp5|Irgc	immunity-related GTPase family, cinema 1	protein-coding
unique_peak1-4624-6-4-0.24347001549294-0.989110657569874	chr3	79162844	79163348	+	0	NA	intron (NM_001142953, intron 1 of 4)	L1M2|LINE|L1	13798	NM_001142953	100233207	Mm.373801	NM_001142953	ENSMUSG00000091685	Gm17359	-	predicted gene, 17359	protein-coding
unique_peak2-37009-8-21--1.45420920068973-1.61268301619756	chr3	122393642	122394475	+	0	NA	Intergenic	Lx5|LINE|L1	-38018	NM_153422	242202	Mm.134911	NM_153422	ENSMUSG00000053965	Pde5a	Cgbpde|Cn5n|Pde5|Pde5a1	phosphodiesterase 5A, cGMP-specific	protein-coding
unique_peak1-2711-35-3-3.4313702584625-9.33205689293591	chr16	91953354	91954775	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-22189	NM_138597	28080	Mm.41	NM_138597	ENSMUSG00000022956	Atp5o	ATPO|D12Wsu28e|OSCP	ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	protein-coding
common_peak2-30426-38-31-0.57145265929853-1.10165134406427	chr7	43442922	43443955	+	0	NA	Intergenic	Intergenic	3076466	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak2-24867-55-130--0.828803130384748-3.68237801621386	chr17	79614424	79616031	+	0	NA	Intergenic	B3A|SINE|B2	139204	NM_026514	260409	Mm.140601	NM_026514	ENSMUSG00000036533	Cdc42ep3	3200001F04Rik|AA986861|Borg2|Cep3|UB1	CDC42 effector protein (Rho GTPase binding) 3	protein-coding
common_peak1-14240-17-56--1.6145936759597-4.44353284653604	chr2	153345818	153346441	+	0	NA	intron (NM_001134300, intron 1 of 10)	intron (NM_001134300, intron 1 of 10)	9578	NM_001134300	329540	Mm.50600	NM_001001986	ENSMUSG00000061411	Nol4l	4931410H15|8430427H17Rik|AI429157|Gm1636	nucleolar protein 4-like	protein-coding
unique_peak1-663-10-6-0.549060422951165-1.21398586181642	chr10	59979182	59979705	+	0	NA	intron (NR_045556, intron 10 of 68)	intron (NR_045556, intron 10 of 68)	116969	NM_001164374	100302688	Mm.444135	NM_001164374	ENSMUSG00000090439	Gm17455	-	predicted gene, 17455	protein-coding
common_peak2-27180-20-19-0.16614668970383-0.348739088570342	chr3	36065982	36066821	+	0	NA	3' UTR (NM_001101478, exon 4 of 4)	3' UTR (NM_001101478, exon 4 of 4)	16399	NM_001101478	241944	Mm.260056	NM_001101478	ENSMUSG00000033883	D3Ertd254e	-	DNA segment, Chr 3, ERATO Doi 254, expressed	protein-coding
unique_peak1-7371-9-5-0.604650905683064-1.21398586181642	chrX	53974424	53974892	+	0	NA	Intergenic	Intergenic	-10280	NM_010211	14199	Mm.3126	NM_010211	ENSMUSG00000023092	Fhl1	FHL-1|KyoT|RAM14-1|SLIM|SLIM-1	four and a half LIM domains 1	protein-coding
unique_peak2-38252-4-7--1.02346051385325-1.09384600808989	chr6	125100143	125100555	+	0	NA	intron (NM_178787, intron 3 of 8)	MIR|SINE|MIR	5080	NM_001039669	320678	Mm.129415	NM_178787	ENSMUSG00000038271	Iffo1	4733401N06Rik|A930037G23Rik|HOM-TES-103|Iffo	intermediate filament family orphan 1	protein-coding
unique_peak2-34055-1-6--2.43441193227435-1.56314192529759	chr12	117534288	117534699	+	0	NA	intron (NM_028731, intron 1 of 21)	Lx8|LINE|L1	14798	NM_028731	52635	Mm.273755	NM_028731	ENSMUSG00000021171	Esyt2	2410017M09Rik|4921504I16Rik|CHR2SYT|D12Ertd551e|Fam62b	extended synaptotagmin-like protein 2	protein-coding
common_peak1-8083-38-72--0.618371899581487-1.3503990867063	chr1	179802693	179803933	+	0	NA	Intergenic	RMER19B|LTR|ERVK	-76673	NM_007422	11566	Mm.338021	NM_007422	ENSMUSG00000015961	Adss	AI314886|AS|Adss2	adenylosuccinate synthetase, non muscle	protein-coding
unique_peak2-34844-5-10--1.16381195464315-1.33892459842472	chr15	76013535	76014070	+	0	NA	exon (NM_201390, exon 28 of 32)	exon (NM_201390, exon 28 of 32)	12338	NM_201394	18810	Mm.234912	NM_011117	ENSMUSG00000022565	Plec	AA591047|AU042537|EBS1|PCN|PLTN|Plec1	plectin	protein-coding
common_peak2-23394-31-64--0.797129142215331-1.88758293112677	chr15	58822449	58823709	+	0	NA	intron (NM_001146180, intron 3 of 13)	intron (NM_001146180, intron 3 of 13)	57714	NM_023172	66218	Mm.322294	NM_023172	ENSMUSG00000022354	Ndufb9	1190008J14Rik	NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9	protein-coding
common_peak2-24395-12-10-0.189344366450341-0.386243247519795	chr17	13700605	13701160	+	0	NA	intron (NR_045437, intron 2 of 3)	intron (NR_045437, intron 2 of 3)	-13440	NR_030763	272667	Mm.444718	NR_030763	ENSMUSG00000079711	Smok4a	4930513D10Rik|Smok2c	sperm motility kinase 4A	pseudo
common_peak1-13231-89-20-2.64264933204724-20.1141799438413	chr19	28792110	28794718	+	0	NA	intron (NR_045330, intron 4 of 4)	RLTR28|LTR|ERVL	-38847	NM_175459	226075	Mm.223508	NM_175459		Glis3	4833409N03Rik|E230012L24|E330013K21Rik	GLIS family zinc finger 3	protein-coding
unique_peak2-35251-15-36--1.19728861507329-2.01522565129858	chr17	29490712	29491737	+	0	NA	Intergenic	4.5SRNA|scRNA|scRNA	-6375	NM_019880	56462	Mm.285322	NM_019880	ENSMUSG00000024012	Mtch1	2310034O17Rik|AI255158|AU018396|C77849|PSAP	mitochondrial carrier homolog 1 (C. elegans)	protein-coding
unique_peak2-38507-9-6-0.382258484346616-1.11707584880836	chr7	43671949	43672339	+	0	NA	Intergenic	Intergenic	2847760	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak2-22276-22-21-0.187852486450107-0.376654945067947	chr13	8995407	8996059	+	0	NA	promoter-TSS (NM_027000)	promoter-TSS (NM_027000)	-475	NM_027000	69237	Mm.41800	NM_027000	ENSMUSG00000021149	Gtpbp4	2610028C09Rik|Crfg|Gtpbp3|NGB|Nog1	GTP binding protein 4	protein-coding
common_peak2-24079-40-71--0.510949318691214-1.01621186439953	chr16	31274539	31275408	+	0	NA	exon (NM_025800, exon 1 of 6)	exon (NM_025800, exon 1 of 6)	390	NM_025800	66849	Mm.291593	NM_025800	ENSMUSG00000047714	Ppp1r2	0610025N14Rik|2310007G06Rik|4930440J04Rik|5430408E15Rik|D16Ertd248e|IPP-2	protein phosphatase 1, regulatory (inhibitor) subunit 2	protein-coding
unique_peak1-2084-9-2-1.60465090568306-1.87199725847353	chr15	36903471	36903942	+	0	NA	Intergenic	MLT1J|LTR|MaLR	33451	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
common_peak1-8951-33-38-0.0459353436632801-0.312166972154323	chr11	54787122	54787848	+	0	NA	Intergenic	Intergenic	-11043	NM_001271455	57783	Mm.259671	NM_021327	ENSMUSG00000020400	Tnip1	ABIN|ABIN-1|ABIN1|AU018810|Naf1|Nef|VAN	TNFAIP3 interacting protein 1	protein-coding
common_peak1-14139-11-11--0.0762689164695427-0.301029995663976	chr2	131352239	131352992	+	0	NA	Intergenic	Intergenic	35017	NM_001177838	228608	Mm.136586	NM_145533	ENSMUSG00000027333	Smox	B130066H01Rik|PAO|PAOh1|SMO	spermine oxidase	protein-coding
common_peak1-16318-136-171-0.344041919813889-1.53715387611463	chr5	115488753	115490741	+	0	NA	intron (NM_029012, intron 1 of 10)	B2_Mm2|SINE|B2	28214	NM_029012	74585	Mm.355894	NM_029012	ENSMUSG00000029550	Sppl3	4833416I09Rik|Psl4|Usmg3	signal peptide peptidase 3	protein-coding
unique_peak1-6255-10-4-1.03448725012141-1.5150158574804	chr7	19678091	19678711	+	0	NA	exon (NM_032418, exon 15 of 15)	exon (NM_032418, exon 15 of 15)	-1492	NM_011383	20475	Mm.3410	NM_011383	ENSMUSG00000040841	Six5	Dmahp|MDMAHP|TrexBF	sine oculis-related homeobox 5	protein-coding
common_peak2-23704-20-14-0.581184188982674-0.690311289528838	chr15	89075367	89075927	+	0	NA	intron (NM_026813, intron 3 of 24)	intron (NM_026813, intron 3 of 24)	33657	NM_027805	71474	Mm.184055	NM_026813	ENSMUSG00000036561	Ppp6r2	1110033O10Rik|8430411H09Rik|B230107H12Rik|Pp6r2|Saps2	protein phosphatase 6, regulatory subunit 2	protein-coding
unique_peak1-512-7-3-0.799090830298189-1.23214870625617	chr1	183229169	183229686	+	0	NA	Intergenic	Intergenic	-53332	NM_028408	72978	Mm.338083	NM_028408	ENSMUSG00000026514	Cnih3	2900075G08Rik|CNIH-3	cornichon homolog 3 (Drosophila)	protein-coding
unique_peak1-2451-12-3-1.64877598508764-2.36932189928148	chr15	102400892	102401396	+	0	NA	intron (NM_146065, intron 2 of 10)	B2_Mm1t|SINE|B2	-45771	NR_033409	54615	Mm.445915	NM_018787	ENSMUSG00000023052	Npff	-	neuropeptide FF-amide peptide precursor	protein-coding
common_peak2-29121-36-32-0.434926966809301-0.779916249636873	chr5	123930327	123931399	+	0	NA	intron (NM_029594, intron 2 of 2)	intron (NM_029594, intron 2 of 2)	1247	NM_029594	76399	Mm.75049	NM_029594	ENSMUSG00000029437	Il31	1700013B14Rik	interleukin 31	protein-coding
common_peak2-25768-13-6-0.971117108580164-1.01572999746118	chr19	32197945	32198405	+	0	NA	3' UTR (NM_001168526, exon 6 of 6)	3' UTR (NM_001168526, exon 6 of 6)	-20545	NM_018830	54447	Mm.491229	NM_018830	ENSMUSG00000024887	Asah2	AI585898	N-acylsphingosine amidohydrolase 2	protein-coding
common_peak2-19883-30-37--0.0782521039517121-0.304004708442489	chr1	93824633	93825919	+	0	NA	Intergenic	Intergenic	127222	NM_007855	13345	Mm.9474	NM_007855	ENSMUSG00000007805	Twist2	Dermo1|bHLHa39	twist basic helix-loop-helix transcription factor 2	protein-coding
common_peak1-18759-29-53--0.642597421548357-1.10619710598095	chr8	126665388	126666342	+	0	NA	Intergenic	L2b|LINE|L2	-89429	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
common_peak2-24073-19-20-0.0103699038829257-0.306326795069978	chr16	30550110	30550641	+	0	NA	intron (NM_172614, intron 1 of 9)	CpG	289	NM_172614	224090	Mm.241459	NM_172614		Tmem44	1700007N03Rik|9330161C17Rik|B230220N21	transmembrane protein 44	protein-coding
unique_peak1-889-18-4-1.99099105634099-2.82951996911245	chr11	32641503	32642335	+	0	NA	intron (NM_134015, intron 12 of 13)	intron (NM_134015, intron 12 of 13)	82675	NM_027050	69351	Mm.65488	NM_027050	ENSMUSG00000020270	Smim23	1700008A04Rik	small integral membrane protein 23	protein-coding
common_peak2-20288-7-10--0.660340788339108-1.12966497611638	chr1	192136526	192136961	+	0	NA	Intergenic	RLTR40|LTR|ERVK	-142184	NM_008937	19130	Mm.132579	NM_008937	ENSMUSG00000010175	Prox1	A230003G05Rik	prospero homeobox 1	protein-coding
common_peak1-15689-15-6-1.20480982849805-1.32521814697968	chr4	139185922	139186660	+	0	NA	intron (NM_175438, intron 1 of 14)	intron (NM_175438, intron 1 of 14)	7482	NM_175438	212647	Mm.273571	NM_175438	ENSMUSG00000028737	Aldh4a1	A930035F14Rik|Ahd-1|Ahd1|Aldh4|Aldh5a1|E330022C09|P5cd|P5cdh|P5cdhl|P5cdhs|Ssdh1	aldehyde dehydrogenase 4 family, member A1	protein-coding
common_peak2-23281-11-9-0.186765489364251-0.344532117358383	chr15	27976791	27977419	+	0	NA	Intergenic	Intergenic	-21502	NM_001081302	223435	Mm.485422	NM_001081302	ENSMUSG00000022263	Trio	6720464I07Rik|AA408740|Solo	triple functional domain (PTPRF interacting)	protein-coding
unique_peak1-1690-11-1-2.50869358425161-2.83420869758413	chr13	75457849	75458377	+	0	NA	Intergenic	Lx|LINE|L1	230678	NM_013628	18548	Mm.1333	NM_013628	ENSMUSG00000021587	Pcsk1	Nec-1|Nec1|PC1|PC3|Phpp-1|SPC3	proprotein convertase subtilisin/kexin type 1	protein-coding
unique_peak2-39555-8-11--0.579740082773585-1.14218153353838	chr9	70232034	70232446	+	0	NA	intron (NM_181072, intron 26 of 27)	B1_Mus1|SINE|Alu	21320	NR_049200	100885839		NR_049200	miRBase:MI0019195	Mir5626	mmu-mir-5626	microRNA mir-5626	ncRNA
unique_peak1-4005-11-3-1.50869358425161-1.95434855131066	chr2	35678370	35678879	+	0	NA	non-coding (NR_040618, exon 3 of 3)	non-coding (NR_040618, exon 3 of 3)	3914	NR_040618	77665	Mm.400558	NR_040618	ENSMUSG00000086449	9030204H09Rik	-	RIKEN cDNA 9030204H09 gene	ncRNA
unique_peak1-1960-24-2-3.20824740204656-6.14077709290365	chr14	105589415	105590371	+	0	NA	Intergenic	Lx8|LINE|L1	-13349	NM_134077	74213	Mm.474531	NM_134077	ENSMUSG00000022119	Rbm26	1700009P03Rik|AI447318|C230097K14Rik|C86225|MLZ-393|Pro1777|Se70-2	RNA binding motif protein 26	protein-coding
unique_peak1-3171-15-6-1.20480982849805-1.32521814697968	chr18	38887897	38888676	+	0	NA	Intergenic	Intergenic	-127364	NM_011898	24066	Mm.42038	NM_011898	ENSMUSG00000024427	Spry4	A030006O18Rik|sprouty4	sprouty homolog 4 (Drosophila)	protein-coding
unique_peak1-2364-13-5-1.19350952991661-1.95509489018123	chr15	88758038	88758790	+	0	NA	intron (NM_172818, intron 7 of 11)	intron (NM_172818, intron 7 of 11)	26434	NM_172818	239591	Mm.86807	NM_172818	ENSMUSG00000022388	Ttll8	1700019P01Rik|4933401B17	tubulin tyrosine ligase-like family, member 8	protein-coding
common_peak1-19440-11-8-0.338768582809301-1.14218153353838	chrX	95026549	95027055	+	0	NA	Intergenic	Lx2B|LINE|L1	-318287	NM_013476	11835	Mm.39005	NM_013476		Ar	AW320017|Tfm	androgen receptor	protein-coding
unique_peak2-37300-6-5--0.0195643903408542-0.947717972411649	chr4	120975060	120975412	+	0	NA	Intergenic	L1Md_A|LINE|L1	22286	NM_001033791	545677	Mm.372731	NM_001033791	ENSMUSG00000073764	Gm12888	OTTMUSG00000008911	predicted gene 12888	protein-coding
unique_peak2-34539-11-48--2.10601625986359-5.73642998372103	chr14	55884724	55885734	+	0	NA	Intergenic	Intergenic	44385	NM_027790	71412	Mm.85484	NM_027790	ENSMUSG00000022209	Dhrs2	5430405K24Rik|Hep27	dehydrogenase/reductase member 2	protein-coding
unique_peak2-33441-3-5--0.998945590680433-0.96108193396963	chr11	61642960	61643345	+	0	NA	intron (NM_013881, intron 8 of 26)	L1Md_A|LINE|L1	25442	NM_013881	29869	Mm.162025	NM_013881	ENSMUSG00000004798	Ulk2	A830085I22Rik|AU015340|Unc51.2|mKIAA0623	unc-51 like kinase 2	protein-coding
common_peak2-27173-26-32--0.116495027199991-0.315041925765944	chr3	32708582	32709547	+	0	NA	Intergenic	MTD|LTR|MaLR	-7484	NM_001013024	72607	Mm.316153	NM_001013024		Usp13	2700071E21Rik|AI848077|ISOT3|IsoT-3	ubiquitin specific peptidase 13 (isopeptidase T-3)	protein-coding
common_peak1-8141-13-12-0.0780323124966764-0.334470287753051	chr1	191062358	191062964	+	0	NA	intron (NM_001281847, intron 6 of 6)	intron (NM_001281847, intron 6 of 6)	104571	NM_001159850	16526	Mm.33304	NM_010607	ENSMUSG00000037624	Kcnk2	A430027H14Rik|AI848635|TREK-1	potassium channel, subfamily K, member 2	protein-coding
common_peak2-21332-119-180-0.0385920340468386-0.322389697454452	chr11	75654187	75657022	+	0	NA	intron (NM_029548, intron 5 of 7)	intron (NM_029548, intron 5 of 7)	-46045	NM_007873	13447	Mm.5137	NM_007873	ENSMUSG00000020848	Doc2b	-	double C2, beta	protein-coding
unique_peak1-1396-7-3-0.799090830298189-1.23214870625617	chr12	69886889	69887416	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	373021	NM_009093	20090	Mm.379006	NM_009093	ENSMUSG00000034892	Rps29	-	ribosomal protein S29	protein-coding
unique_peak2-36176-4-8--1.19338551529556-1.21878474469819	chr2	29624735	29625095	+	0	NA	Intergenic	Intergenic	7867	NM_001177392	433416	Mm.330112	NM_001034887	ENSMUSG00000075425	Gm13547	OTTMUSG00000012686	predicted gene 13547	protein-coding
unique_peak2-33549-1-6--2.43441193227435-1.56314192529759	chr11	79729825	79730155	+	0	NA	Intergenic	Intergenic	45899	NM_144826	216987	Mm.274961	NM_144826	ENSMUSG00000035575	Utp6	4732497O03Rik|HCA66	UTP6, small subunit (SSU) processome component, homolog (yeast)	protein-coding
common_peak2-27569-4-8--1.19338551529556-1.21878474469819	chr3	98254059	98254351	+	0	NA	Intergenic	Intergenic	60190	NM_001111336	15495	Mm.14309	NM_008294	ENSMUSG00000095143	Hsd3b4	-	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 4	protein-coding
common_peak1-15415-33-58--0.551305486836313-1.02303743263849	chr4	88721835	88722796	+	0	NA	intron (NR_033533, intron 2 of 2)	intron (NR_033533, intron 2 of 2)	26104	NR_033533	100040617	Mm.171720	NR_033533	ENSMUSG00000085183	Gm12603	OTTMUSG00000007693	predicted gene 12603	ncRNA
unique_peak2-35669-7-14--1.10779976531033-0.817533494790411	chr18	9299895	9300367	+	0	NA	Intergenic	ORR1A4|LTR|MaLR	-17324	NM_153086	225152	Mm.119273	NM_153086	ENSMUSG00000036855	Gjd4	9430022F06Rik|Cx39	gap junction protein, delta 4	protein-coding
common_peak2-25417-22-38--0.638118113774844-0.887741995158868	chr19	55099107	55100449	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	74159	NM_008149	14732	Mm.210196	NM_008149	ENSMUSG00000024978	Gpam	GPAT|GPAT1	glycerol-3-phosphate acyltransferase, mitochondrial	protein-coding
unique_peak2-35240-2-5--1.50241675698448-1.08602067057793	chr16	94574516	94574921	+	0	NA	Intergenic	Intergenic	17219	NM_001159619	56176	Mm.474449	NM_019543	ENSMUSG00000022940	Pigp	Dcrc|Dscr5	phosphatidylinositol glycan anchor biosynthesis, class P	protein-coding
common_peak1-17129-36-18-1.23139357272417-2.89693331866911	chr6	115509811	115511422	+	0	NA	intron (NM_199033, intron 5 of 11)	intron (NM_199033, intron 5 of 11)	15894	NM_199033	381802	Mm.291208	NM_199033	ENSMUSG00000042389	Tsen2	AU067695	tRNA splicing endonuclease 2 homolog (S. cerevisiae)	protein-coding
unique_peak1-418-8-1-2.00522241794757-2.05605744720049	chr1	160521766	160522273	+	0	NA	intron (NM_001205204, intron 11 of 22)	L1_Mur2|LINE|L1	86263	NR_030441	735253		NR_030441		Mir488	Mirn488|mmu-mir-488	microRNA 488	ncRNA
common_peak1-17755-35-70--0.718376861042178-1.71556178298764	chr7	84689235	84690170	+	0	NA	Intergenic	Intergenic	1033022	NM_008746	18213	Mm.33496	NM_008746		Ntrk3	AW125844|Ntrk3_tv3|TrkC	neurotrophic tyrosine kinase, receptor, type 3	protein-coding
common_peak2-21622-34-44--0.109784569328409-0.311130777923626	chr11	100969101	100971186	+	0	NA	intron (NM_026501, intron 1 of 8)	intron (NM_026501, intron 1 of 8)	10995	NM_026501	67998	Mm.33881	NM_026501	ENSMUSG00000017802	Fam134c	1300010M03Rik|4933404C01Rik|AI551748	family with sequence similarity 134, member C	protein-coding
common_peak1-11491-128-183-0.141444046021062-0.526153835714035	chr15	102404609	102407057	+	0	NA	intron (NM_146065, intron 2 of 10)	(TTTC)n|Simple_repeat|Simple_repeat	50019	NM_146065	223922	Mm.208714	NM_146065	ENSMUSG00000099083	Atf7	1110012F10Rik|9430065F09Rik|AI549878|C130020M04Rik	activating transcription factor 7	protein-coding
common_peak2-20311-33-67--0.75612527872481-1.79658675346641	chr10	18021913	18023358	+	0	NA	Intergenic	Intergenic	-67848	NM_144820	215814	Mm.296565	NM_144820	ENSMUSG00000059554	Ccdc28a	1700009P13Rik|AI480677	coiled-coil domain containing 28A	protein-coding
common_peak1-12803-256-204-1.19180332602038-23.4406489832622	chr18	65579298	65582560	+	0	NA	Intergenic	ORR1A2|LTR|MaLR	-9722	NM_172833	240354	Mm.132613	NM_172833	ENSMUSG00000032688	Malt1	A630046N12|D430033E09Rik	mucosa associated lymphoid tissue lymphoma translocation gene 1	protein-coding
common_peak1-15474-8-10--0.454209200689727-1.078512453669	chr4	107803165	107803707	+	0	NA	Intergenic	RMER1B|Other|Other	-12284	NM_011327	20280	Mm.379011	NM_011327	ENSMUSG00000028603	Scp2	AA409774|AA409893|C76618|C79031|NSL-TP|SCP-2|SCP-X|SCPX|ns-LTP	sterol carrier protein 2, liver	protein-coding
unique_peak1-245-16-1-3.11826364226806-4.46429741251234	chr1	90975408	90976208	+	0	NA	intron (NM_133816, intron 1 of 5)	intron (NM_133816, intron 1 of 5)	8771	NM_133816	98402	Mm.170983	NM_133816		Sh3bp4	AI594717|AW227605|BOG25	SH3-domain binding protein 4	protein-coding
unique_peak2-38128-0-8--4.01005593191652-2.05605744720049	chr6	83149315	83149822	+	0	NA	intron (NM_001198866, intron 31 of 31)	intron (NM_001198866, intron 31 of 31)	19985	NM_007835	13191	Mm.6919	NM_007835	ENSMUSG00000031865	Dctn1	AL022633|Glued|p150|p150<glued>	dynactin 1	protein-coding
common_peak2-28099-32-57--0.578888975907912-1.03825765497309	chr4	88721870	88722661	+	0	NA	intron (NR_033533, intron 2 of 2)	CT-rich|Low_complexity|Low_complexity	26054	NR_033533	100040617	Mm.171720	NR_033533	ENSMUSG00000085183	Gm12603	OTTMUSG00000007693	predicted gene 12603	ncRNA
common_peak1-9901-13-17--0.391452970804544-0.364171515310935	chr12	86786779	86787521	+	0	NA	Intergenic	Intergenic	-27701	NM_010234	14281	Mm.246513	NM_010234	ENSMUSG00000021250	Fos	D12Rfj1|c-fos|cFos	FBJ osteosarcoma oncogene	protein-coding
common_peak1-10613-22-27--0.160070816970199-0.317737750275047	chr14	32513211	32514107	+	0	NA	3' UTR (NM_001024604, exon 28 of 28)	3' UTR (NM_001024604, exon 28 of 28)	59416	NM_025295	26363	Mm.282679	NM_025295	ENSMUSG00000021900	Btd	-	biotinidase	protein-coding
common_peak1-14084-17-36--0.991157027423912-1.46094028072561	chr2	122028534	122029210	+	0	NA	intron (NM_028914, intron 6 of 6)	RLTR18|LTR|ERVK	16864	NM_028914	74401	Mm.374834	NM_028914	ENSMUSG00000027229	4933406J08Rik	-	RIKEN cDNA 4933406J08 gene	protein-coding
common_peak2-24300-77-113--0.0483634346087438-0.309794050023144	chr17	26507307	26509805	+	0	NA	Intergenic	Intergenic	-43354	NM_001081656	240055	Mm.133211	NM_001081656	ENSMUSG00000034413	Neurl1b	C230078M08Rik|EG240055	neuralized homolog 1b (Drosophila)	protein-coding
common_peak2-21777-5-7--0.704380336005853-1.01466476204226	chr11	117205937	117206208	+	0	NA	intron (NM_001113488, intron 1 of 9)	intron (NM_001113488, intron 1 of 9)	12445	NM_001113488	53860	Mm.38450	NM_017380	ENSMUSG00000059248	Sept9	MSF1|Msf|PNUTL4|Sint1	septin 9	protein-coding
unique_peak1-5237-17-4-1.89636824331768-2.60953805094651	chr5	44239395	44240103	+	0	NA	Intergenic	Intergenic	-20317	NM_007646	12494	Mm.249873	NM_007646	ENSMUSG00000029084	Cd38	ADPRC 1|Cd38-rs1	CD38 antigen	protein-coding
unique_peak1-1609-9-1-2.18961340640422-2.31132995230379	chr13	38905111	38905525	+	0	NA	Intergenic	Intergenic	147088	NM_001170430	108652	Mm.255506	NM_134060	ENSMUSG00000021432	Slc35b3	4921526O06Rik|AI428480|CGI-19|PABST2|PAPST2	solute carrier family 35, member B3	protein-coding
unique_peak1-6872-7-1-1.79909083029819-1.80617997398389	chr8	88299317	88299843	+	0	NA	intron (NM_028007, intron 8 of 17)	intron (NM_028007, intron 8 of 17)	65268	NM_028007	71927	Mm.61018	NM_028007	ENSMUSG00000031703	Itfg1	2310047C21Rik|AI314457|Cda08|D8Wsu49e	integrin alpha FG-GAP repeat containing 1	protein-coding
common_peak2-25527-28-12-1.35251940168037-2.51395164919446	chr19	5811380	5812009	+	0	NA	Intergenic	Intergenic	-9023	NR_002847	72289	Mm.298256	NR_002847	ENSMUSG00000092341	Malat1	2210401K01Rik|9430072K23Rik|AI647968|Neat2	metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)	ncRNA
common_peak1-13212-15-11-0.4272022498345-0.503257505534083	chr19	24156066	24156877	+	0	NA	Intergenic	Intergenic	-50962	NM_001114174	381217	Mm.426078	NM_001114174	ENSMUSG00000071604	Fam189a2	AI414343|AI666772|Gm967	family with sequence similarity 189, member A2	protein-coding
common_peak1-13818-138-145-0.605846265816372-3.83531347594132	chr2	52741598	52743013	+	0	NA	intron (NM_172409, intron 1 of 26)	Lx6|LINE|L1	25403	NM_172409	71409	Mm.394427	NM_172409	ENSMUSG00000036053	Fmnl2	5430425K04Rik|Man	formin-like 2	protein-coding
unique_peak2-32533-3-12--2.11442280810037-2.15846853396659	chr1	64736850	64737461	+	0	NA	promoter-TSS (NM_001097644)	promoter-TSS (NM_001097644)	78	NR_038009	69941	Mm.69044	NR_038009	ENSMUSG00000087213	2810408I11Rik	-	RIKEN cDNA 2810408I11 gene	ncRNA
common_peak1-15395-21-39--0.752438829621127-1.08405458203116	chr4	81442098	81443004	+	0	NA	Intergenic	Lx7|LINE|L1	-268733	NR_040659	545641	Mm.216028	NR_040659	ENSMUSG00000085022	Gm5860	EG545641	predicted gene 5860	ncRNA
unique_peak1-1657-10-4-1.03448725012141-1.5150158574804	chr13	62623594	62624162	+	0	NA	intron (NM_001162911, intron 1 of 3)	MTA_Mm|LTR|MaLR	36081	NM_175252	77117	Mm.470091	NM_175252		Zfp934	6720457D02Rik	zinc finger protein 934	protein-coding
common_peak1-16235-15-9-0.690236655668294-0.732381977911291	chr5	103730945	103731731	+	0	NA	Intergenic	Intergenic	-3290	NR_040699	74624	Mm.389662	NR_040699		4930429D17Rik	-	RIKEN cDNA 4930429D17 gene	ncRNA
common_peak1-15504-23-26--0.0331199976543877-0.301029995663988	chr4	116150016	116151107	+	0	NA	Intergenic	Cheshire|DNA|MER1_type	-13775	NM_008641	17776	Mm.9287	NM_008641	ENSMUSG00000003810	Mast2	MAST205|Mtssk	microtubule associated serine/threonine kinase 2	protein-coding
unique_peak2-34806-10-14--0.550475250599749-0.446472590016315	chr15	73150941	73151633	+	0	NA	intron (NM_007982, intron 6 of 31)	intron (NM_007982, intron 6 of 31)	102334	NM_007982	14083	Mm.254494	NM_007982	ENSMUSG00000022607	Ptk2	FAK|FRNK|Fadk|mKIAA4203|p125FAK	PTK2 protein tyrosine kinase 2	protein-coding
common_peak1-16527-10-17--0.813509656433543-0.699649909729472	chr5	142628711	142629218	+	0	NA	intron (NM_177879, intron 35 of 44)	GA-rich|Low_complexity|Low_complexity	-248487	NM_199068	17425	Mm.24214	NM_010812	ENSMUSG00000056493	Foxk1	A630048H08Rik|AI463295|ENSMUSG00000075577|Gm10868|Mnf	forkhead box K1	protein-coding
common_peak2-27215-30-23-0.584712908770717-0.92816130897933	chr3	50443051	50444124	+	0	NA	Intergenic	(CAGAGA)n|Simple_repeat|Simple_repeat	-196052	NM_011990	26570	Mm.260988	NM_011990	ENSMUSG00000027737	Slc7a11	9930009M05Rik|AI451155|sut|xCT	solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	protein-coding
common_peak1-13699-12-12--0.0516637330534535-0.309718203022949	chr2	30393514	30394131	+	0	NA	Intergenic	B4|SINE|B4	-56742	NM_030137	78617	Mm.40413	NM_030137	ENSMUSG00000047363	Cstad	9530039B02Rik	CSA-conditional, T cell activation-dependent protein	protein-coding
common_peak1-14089-16-18--0.129663871175524-0.307235046933848	chr2	122377490	122378053	+	0	NA	Intergenic	L1_Mur1|LINE|L1	59242	NM_025961	67092	Mm.29975	NM_025961	ENSMUSG00000027199	Gatm	1810003P21Rik|AI314789|AT	glycine amidinotransferase (L-arginine:glycine amidinotransferase)	protein-coding
unique_peak2-38491-4-11--1.6084230145744-1.68134727924692	chr7	35329365	35330049	+	0	NA	Intergenic	Intergenic	108153	NM_146188	233107	Mm.486198	NM_146188	ENSMUSG00000030499	Kctd15	BC031749	potassium channel tetramerisation domain containing 15	protein-coding
common_peak2-27673-28-71--1.11696588162085-3.38698503266952	chr3	115887272	115888949	+	0	NA	Intergenic	MTE2a|LTR|MaLR	-55504	NM_011693	22329	Mm.76649	NM_011693	ENSMUSG00000027962	Vcam1	CD106|Vcam-1	vascular cell adhesion molecule 1	protein-coding
common_peak1-9757-51-71--0.0950011758397391-0.326210013932454	chr12	54709654	54710480	+	0	NA	intron (NM_013780, intron 3 of 11)	PB1|SINE|Alu	360403	NM_013780	27386	Mm.247044	NM_013780	ENSMUSG00000021010	Npas3	4930423H22Rik|bHLHe12	neuronal PAS domain protein 3	protein-coding
common_peak1-18334-49-50-0.333858481053689-0.675315000769687	chr8	61487311	61488527	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	97367	NM_173411	234290	Mm.39244	NM_173411	ENSMUSG00000049946	BC030500	-	cDNA sequence BC030500	protein-coding
unique_peak2-36690-0-44--6.33198402680389-11.7647344460449	chr3	34656368	34657425	+	0	NA	Intergenic	Intergenic	-14101	NR_110488	102638436	Mm.261793	NR_110488		Peril	-	Peril transcript	ncRNA
common_peak2-22843-16-29--0.788626953340457-0.98872314135509	chr14	21499149	21500118	+	0	NA	intron (NM_001168273, intron 3 of 23)	intron (NM_001168273, intron 3 of 23)	6090	NM_001168273	218811	Mm.173119	NM_172596	ENSMUSG00000039367	Sec24c	2610204K03Rik|mKIAA0079	Sec24 related gene family, member C (S. cerevisiae)	protein-coding
common_peak1-18414-40-26-0.90408818058763-2.09593985174544	chr8	73134818	73136367	+	0	NA	Intergenic	CpG	-3379	NM_133772	76900	Mm.6667	NM_133772	ENSMUSG00000070003	Ssbp4	1210002E11Rik|AW743380|Sspb4	single stranded DNA binding protein 4	protein-coding
common_peak2-20066-16-15-0.118263642268062-0.328191099940264	chr1	153121329	153121999	+	0	NA	Intergenic	Intergenic	-69964	NM_001039512	117198	Mm.33764	NM_028582	ENSMUSG00000023150	Ivns1abp	1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850	influenza virus NS1A binding protein	protein-coding
common_peak2-32259-17-26--0.53659116395843-0.538442145997695	chrX	8145175	8145753	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-20083	NM_001205108	668976	Mm.227643	NM_001205108	ENSMUSG00000079702	Ssxb6	-	synovial sarcoma, X member B, breakpoint 6	protein-coding
common_peak2-31246-26-45--0.595662863898551-0.956885677565398	chr8	70527437	70528398	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-29444	NM_177698	234353	Mm.32525	NM_027626	ENSMUSG00000030465	Psd3	4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D	pleckstrin and Sec7 domain containing 3	protein-coding
common_peak2-30291-15-22--0.511397205501357-0.50761186003982	chr7	19227574	19228124	+	0	NA	Intergenic	Intergenic	14225	NM_027403	72242	Mm.326858	NM_027403	ENSMUSG00000070796	Psg21	1600019C01Rik|1600025N01Rik|1600026N13Rik|cea8	pregnancy-specific glycoprotein 21	protein-coding
common_peak1-18251-11-19--0.813234510635749-0.769930178837768	chr8	33732103	33732562	+	0	NA	Intergenic	Intergenic	328166	NM_001177589	100042715	Mm.291093	NM_001177589		Gm3985	-	predicted gene 3985	protein-coding
unique_peak2-35249-2-8--2.08737925770563-1.65811743852845	chr16	97997256	97997627	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-12079	NM_023663	72388	Mm.35290	NM_023663	ENSMUSG00000005251	Ripk4	2310069J12Rik|AI552420|ANKK2|Ankrd3|DIk|PKK|RIP4	receptor-interacting serine-threonine kinase 4	protein-coding
common_peak1-17275-20-19-0.16614668970383-0.348739088570342	chr6	135064836	135065546	+	0	NA	intron (NM_001205396, intron 2 of 3)	intron (NM_001205396, intron 2 of 3)	3110	NM_053118	93746	Mm.49902	NM_053118	ENSMUSG00000030205	Gprc5d	-	G protein-coupled receptor, family C, group 5, member D	protein-coding
common_peak2-26917-6-5--0.0195643903408542-0.947717972411649	chr2	163419797	163420175	+	0	NA	Intergenic	PB1D10|SINE|Alu	-8064	NM_181734	76080	Mm.89828	NM_029512	ENSMUSG00000017679	Ttpal	3110080A02Rik|5830472M02Rik	tocopherol (alpha) transfer protein-like	protein-coding
common_peak2-25662-137-187-0.228445847878125-0.882683879450632	chr19	10524715	10525972	+	0	NA	3' UTR (NM_173068, exon 11 of 11)	3' UTR (NM_173068, exon 11 of 11)	6594	NM_001111140	278795	Mm.490638	NM_001111140	ENSMUSG00000090291	Lrrc10b	Gm705|SerdinR	leucine rich repeat containing 10B	protein-coding
common_peak1-9137-40-12-1.95853596461001-5.94371904048539	chr11	75604914	75606421	+	0	NA	intron (NM_007873, intron 1 of 8)	intron (NM_007873, intron 1 of 8)	3892	NM_007873	13447	Mm.5137	NM_007873	ENSMUSG00000020848	Doc2b	-	double C2, beta	protein-coding
common_peak1-14832-22-50--1.02514123688409-2.14568534968695	chr3	92211051	92211807	+	0	NA	promoter-TSS (NM_011475)	promoter-TSS (NM_011475)	-484	NM_011475	20763	Mm.196439	NM_011475	ENSMUSG00000042157	Sprr2i	-	small proline-rich protein 2I	protein-coding
common_peak2-28157-8-7-0.00522241794757061-1.00793137938329	chr4	107066439	107066874	+	0	NA	intron (NM_028355, intron 14 of 17)	intron (NM_028355, intron 14 of 17)	26267	NM_028355	72787	Mm.28478	NM_028355	ENSMUSG00000028614	Ndc1	2810475A17Rik|AI450313|Tmem48	NDC1 transmembrane nucleoporin	protein-coding
unique_peak2-34800-3-8--1.58390809140159-1.39487600375387	chr15	72658112	72658662	+	0	NA	intron (NM_001164641, intron 17 of 17)	L1_Mur3|LINE|L1	-17633	NR_002864	353342	Mm.440245	NR_002864		Peg13	-	paternally expressed 13	ncRNA
common_peak2-23313-26-12-1.22745937401737-2.03163221100073	chr15	36818329	36818993	+	0	NA	Intergenic	Intergenic	-91977	NM_001253806	22631	Mm.3360	NM_011740	ENSMUSG00000022285	Ywhaz	1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	protein-coding
unique_peak2-36099-8-7-0.00522241794757061-1.00793137938329	chr2	122027917	122028331	+	0	NA	intron (NM_028914, intron 6 of 6)	RMER5|LTR|ERV1	16116	NM_028914	74401	Mm.374834	NM_028914	ENSMUSG00000027229	4933406J08Rik	-	RIKEN cDNA 4933406J08 gene	protein-coding
unique_peak2-34161-2-4--1.23938235115068-0.931118710592187	chr13	30194955	30195252	+	0	NA	Intergenic	Intergenic	-33256	NM_153546	218121	Mm.89682	NM_153546	ENSMUSG00000038732	Mboat1	9130215M02Rik|BC023845|LPEAT1|Moact1|Oact1	membrane bound O-acyltransferase domain containing 1	protein-coding
unique_peak2-38655-4-17--2.19338551529556-2.18192634393779	chr7	97332285	97332888	+	0	NA	intron (NM_146194, intron 13 of 20)	intron (NM_146194, intron 13 of 20)	53844	NM_001252520	233489	Mm.235175	NM_146194	ENSMUSG00000039361	Picalm	CALM|CLTH|PAP180|fit-1|fit1|mKIAA4114	phosphatidylinositol binding clathrin assembly protein	protein-coding
unique_peak2-33570-4-10--1.48289213249054-1.5150158574804	chr11	85139460	85139883	+	0	NA	intron (NM_016910, intron 1 of 5)	MTD|LTR|MaLR	14915	NM_016910	53892	Mm.45609	NM_016910	ENSMUSG00000020525	Ppm1d	AV338790|Wip1	protein phosphatase 1D magnesium-dependent, delta isoform	protein-coding
unique_peak1-2420-10-0-3.35641534500877-3.31132995230379	chr15	100041343	100041886	+	0	NA	intron (NM_001159361, intron 36 of 37)	B1_Mus2|SINE|Alu	-16676	NM_007497	11908	Mm.676	NM_007497	ENSMUSG00000023027	Atf1	-	activating transcription factor 1	protein-coding
common_peak1-9699-25-54--0.919509808179554-1.96184293807029	chr12	24651322	24652067	+	0	NA	Intergenic	Intergenic	130440	NM_001256489	66808	Mm.379124	NM_001256489		9030624G23Rik	-	RIKEN cDNA 9030624G23 gene	protein-coding
unique_peak2-34776-2-8--2.08737925770563-1.65811743852845	chr15	59585972	59586427	+	0	NA	Intergenic	Intergenic	40315	NR_045076	100503021	Mm.402924	NR_045076		Gm19510	-	predicted gene, 19510	ncRNA
common_peak2-23227-13-13--0.0288828914198356-0.309074325783021	chr15	5445881	5446472	+	0	NA	promoter-TSS (NR_045274)	promoter-TSS (NR_045274)	-142	NR_045274	71432	Mm.291087	NR_045274		5430437J10Rik	-	RIKEN cDNA 5430437J10 gene	ncRNA
common_peak1-17857-58-34-1.16666691794553-4.30237878344897	chr7	113259635	113261677	+	0	NA	Intergenic	PB1D9|SINE|Alu	-37994	NR_030719	668108	Mm.429088	NR_030719		Gm8979	EG668108|Gm21884	very large inducible GTPase 1 pseudogene	pseudo
common_peak2-23229-17-14-0.311405742596519-0.466170754204149	chr15	5536913	5537659	+	0	NA	intron (NR_045274, intron 3 of 4)	intron (NR_045274, intron 3 of 4)	90968	NR_045274	71432	Mm.291087	NR_045274		5430437J10Rik	-	RIKEN cDNA 5430437J10 gene	ncRNA
unique_peak2-34739-7-11--0.785871670422967-1.21681515183528	chr15	43179186	43179661	+	0	NA	Intergenic	RSINE1|SINE|B4	-65141	NM_008388	16341	Mm.289992	NM_008388	ENSMUSG00000022336	Eif3e	48kDa|Eif3s6|Int6|eIF3-p46|eIF3-p48	eukaryotic translation initiation factor 3, subunit E	protein-coding
common_peak2-21388-9-20--1.20270401637454-1.23014042908325	chr11	79992427	79993013	+	0	NA	TTS (NM_172133)	TTS (NM_172133)	-4654	NM_028019	71956	Mm.22985	NM_028019	ENSMUSG00000020707	Rnf135	0610037N03Rik|2410006N06Rik	ring finger protein 135	protein-coding
common_peak2-19956-28-19-0.7310310249341-1.12969433525548	chr1	132292145	132292771	+	0	NA	intron (NM_007827, intron 9 of 9)	L1_Mm|LINE|L1	27118	NM_007827	13137	Mm.436759	NM_007827	ENSMUSG00000026401	Daf2	AI323748|Cd55b|Daf|Daf-TM|TM-DAF	decay accelerating factor 2	protein-coding
common_peak2-26798-12-12--0.0516637330534535-0.309718203022949	chr2	148731660	148732322	+	0	NA	Intergenic	Lx5|LINE|L1	-30787	NM_009976	13010	Mm.4263	NM_009976	ENSMUSG00000027447	Cst3	CysC	cystatin C	protein-coding
common_peak1-14431-53-47-0.556010511694772-1.368434703924	chr2	180709247	180711054	+	0	NA	intron (NM_001177709, intron 7 of 11)	PB1D7|SINE|Alu	8145	NM_001177706	228998	Mm.33765	NM_145760	ENSMUSG00000027575	Arfgap1	AI115377|Arf1gap	ADP-ribosylation factor GTPase activating protein 1	protein-coding
common_peak1-8923-43-46-0.227974333846065-0.475408985215012	chr11	51915371	51916789	+	0	NA	intron (NM_019411, intron 1 of 6)	intron (NM_019411, intron 1 of 6)	3754	NM_019411	19052	Mm.260288	NM_019411		Ppp2ca	PP2A|R75353	protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform	protein-coding
common_peak2-21451-12-16--0.4386868561627-0.368541233333383	chr11	86814083	86814932	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-7243	NM_001005341	77864	Mm.191894	NM_001005341	ENSMUSG00000018427	Ypel2	6430570G24|E130113K08Rik	yippee-like 2 (Drosophila)	protein-coding
common_peak2-26064-29-30-0.158093770228236-0.384630725886669	chr2	59669847	59670531	+	0	NA	intron (NM_001290659, intron 18 of 25)	intron (NM_001290659, intron 18 of 25)	50474	NM_001159636	72137	Mm.288734	NM_028118	ENSMUSG00000026988	Wdsub1	1700048E19Rik|2610014F08Rik	WD repeat, SAM and U-box domain containing 1	protein-coding
common_peak2-23592-68-62-0.592680855798379-1.81852113799162	chr15	80168414	80169589	+	0	NA	intron (NM_001044308, intron 5 of 36)	intron (NM_001044308, intron 5 of 36)	51333	NM_001044308	239556	Mm.291058	NM_001044308	ENSMUSG00000022416	Cacna1i	Ca(V)3.3	calcium channel, voltage-dependent, alpha 1I subunit	protein-coding
common_peak2-21011-23-37--0.526160008934505-0.720235944639228	chr11	29373266	29374388	+	0	NA	intron (NM_176841, intron 17 of 31)	L1_Mm|LINE|L1	41206	NM_026465	67939	Mm.251087	NM_026465	ENSMUSG00000032673	Prorsd1	2010316F05Rik|Ncrna00117|Prdxdd1	prolyl-tRNA synthetase domain containing 1	protein-coding
unique_peak1-618-9-1-2.18961340640422-2.31132995230379	chr10	24139347	24139870	+	0	NA	Intergenic	Intergenic	-175640	NM_010217	14219	Mm.390287	NM_010217	ENSMUSG00000019997	Ctgf	Ccn2|Fisp12|Hcs24|fisp-12	connective tissue growth factor	protein-coding
unique_peak2-34642-7-19--1.52283726458917-1.55050753388976	chr14	101840234	101840970	+	0	NA	TTS (NM_001081278)	TTS (NM_001081278)	167806	NM_001081278	210789	Mm.320639	NM_173380	ENSMUSG00000033083	Tbc1d4	5930406J04Rik|A930035N22|AV295684|As160	TBC1 domain family, member 4	protein-coding
unique_peak1-2937-9-4-0.867685311516858-1.36011389749466	chr17	57108422	57108972	+	0	NA	intron (NM_175731, intron 1 of 5)	MYSERV-int|LTR|ERVK	12852	NM_175731	171168	Mm.218784	NM_175731	ENSMUSG00000045019	Acer1	2310024P18Rik|AI662009|Alkcdase1|Asah3|Cer1	alkaline ceramidase 1	protein-coding
unique_peak1-4680-7-4-0.477162735410827-1.09384600808989	chr3	94987257	94987639	+	0	NA	3' UTR (NM_029885, exon 10 of 10)	3' UTR (NM_029885, exon 10 of 10)	19187	NM_011351	20360	Mm.23662	NM_011351	ENSMUSG00000038777	Sema6c	Semay|mKIAA1869	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	protein-coding
common_peak2-20164-18-10-0.853487532591054-1.03889213727317	chr1	171038046	171038510	+	0	NA	Intergenic	L1Md_A|LINE|L1	423317	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
common_peak1-16141-24-26-0.0383224006042484-0.317118655902073	chr5	73337890	73339079	+	0	NA	intron (NM_153567, intron 2 of 8)	intron (NM_153567, intron 2 of 8)	32883	NM_153567	75991	Mm.121285	NM_153567	ENSMUSG00000036087	Slain2	5033405K12Rik|8030444K12Rik|AI596370	SLAIN motif family, member 2	protein-coding
common_peak2-21489-8-4-0.683294323060208-1.21878474469819	chr11	88582270	88582697	+	0	NA	intron (NR_038058, intron 2 of 3)	intron (NR_038058, intron 2 of 3)	2526	NR_038058	193280	Mm.396842	NR_038058		C030037D09Rik	9330160M04	RIKEN cDNA C030037D09 gene	ncRNA
unique_peak2-39999-9-13--0.617741515653384-0.459837087125828	chrX	164419718	164420400	+	0	NA	intron (NM_001033330, intron 3 of 19)	intron (NM_001033330, intron 3 of 19)	-127050	NM_001290428	333605	Mm.426168	NM_001033330	ENSMUSG00000049176	Frmpd4	Gm196|PKAP1|Pdzd10|Pdzk10|Preso1|preso	FERM and PDZ domain containing 4	protein-coding
unique_peak1-5940-14-8-0.729291158915332-0.771068449301682	chr6	90764260	90764989	+	0	NA	Intergenic	Intergenic	-4507	NM_001134384	232227	Mm.196943	NM_182784	ENSMUSG00000034312	Iqsec1	AW561907|BC026481|BRAG2|D6Ertd349e|cI-43	IQ motif and Sec7 domain 1	protein-coding
common_peak1-12481-94-101-0.457164225877821-1.67753543714036	chr17	84789891	84791240	+	0	NA	intron (NM_183021, intron 25 of 37)	ORR1E|LTR|MaLR	74983	NM_183021	240174	Mm.246767	NM_177826	ENSMUSG00000024251	Thada	6530405K19|A930021O22|AU019899|BC052885|GITA	thyroid adenoma associated	protein-coding
common_peak1-9149-63-88--0.037420839895808-0.302270843793743	chr11	76762644	76763822	+	0	NA	intron (NM_178645, intron 2 of 11)	ID_B1|SINE|B4	4075	NM_178645	104184	Mm.399785	NM_178645	ENSMUSG00000020840	Blmh	AI035728|Bh|Bmh	bleomycin hydrolase	protein-coding
unique_peak1-5633-12-3-1.64877598508764-2.36932189928148	chr6	17073532	17074093	+	0	NA	Intergenic	Intergenic	58663	NM_207176	21753	Mm.436548	NM_011570	ENSMUSG00000029552	Tes	D6Ertd352e|TESS|Tes1|Tes2|testin2	testis derived transcript	protein-coding
common_peak1-8939-38-33-0.483989818048191-0.907712525274296	chr11	53519564	53521037	+	0	NA	intron (NM_009012, intron 1 of 24)	CpG	521	NM_009012	19360	Mm.4888	NM_009012	ENSMUSG00000020380	Rad50	Mrell|Rad50l	RAD50 homolog (S. cerevisiae)	protein-coding
common_peak1-7653-30-43--0.289756209145424-0.435893058718175	chr1	74236573	74237474	+	0	NA	Intergenic	Intergenic	4182	NM_178241	227288	Mm.337035	NM_178241	ENSMUSG00000048480	Cxcr1	Il8ra	chemokine (C-X-C motif) receptor 1	protein-coding
common_peak1-13015-12-12--0.0516637330534535-0.309718203022949	chr19	5085149	5085780	+	0	NA	promoter-TSS (NM_001001885)	promoter-TSS (NM_001001885)	13	NM_001001885	381199	Mm.329663	NM_001001885	ENSMUSG00000061451	Tmem151a	AW125688|Gm961|Tmem151	transmembrane protein 151A	protein-coding
common_peak2-27157-28-20-0.660641697042702-1.00055860626307	chr3	30595054	30595845	+	0	NA	Intergenic	Intergenic	48641	NM_001290510	68307	Mm.389425	NM_026668	ENSMUSG00000027703	Lrriq4	4930558O21Rik	leucine-rich repeats and IQ motif containing 4	protein-coding
unique_peak2-34724-12-16--0.4386868561627-0.368541233333383	chr15	36899163	36900022	+	0	NA	Intergenic	Intergenic	37565	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
common_peak1-13814-22-35--0.522640896354908-0.664636481544818	chr2	51934530	51935363	+	0	NA	intron (NM_175238, intron 7 of 35)	intron (NM_175238, intron 7 of 35)	6589	NM_175238	51869	Mm.254530	NM_175238	ENSMUSG00000036202	Rif1	5730435J01Rik|6530403D07Rik|AU016181|AW549474|D2Ertd145e	Rap1 interacting factor 1 homolog (yeast)	protein-coding
common_peak2-30213-18-17-0.142994149786039-0.353907621462753	chr7	126565876	126566441	+	0	NA	Intergenic	Intergenic	36628	NM_025989	67133	Mm.46403	NM_025989	ENSMUSG00000030954	Gp2	2310037I18Rik|AV060639	glycoprotein 2 (zymogen granule membrane)	protein-coding
common_peak2-30821-43-51-0.082123467382611-0.333814721158537	chr7	129591560	129592578	+	0	NA	intron (NM_008855, intron 3 of 16)	B3|SINE|B2	159430	NM_008855	18751	Mm.207496	NM_008855	ENSMUSG00000052889	Prkcb	A130082F03Rik|PKC-Beta|Pkcb|Prkcb1|Prkcb2	protein kinase C, beta	protein-coding
unique_peak2-34075-5-6--0.511735258063458-0.947717972411649	chr13	5423772	5424191	+	0	NA	Intergenic	RMER15|LTR|ERVL	433357	NR_045891	71867	Mm.179181	NR_045891		1700016G22Rik	-	RIKEN cDNA 1700016G22 gene	ncRNA
common_peak2-24115-61-35-1.21282432830703-4.66635584136473	chr16	33056231	33057148	+	0	NA	promoter-TSS (NM_021338)	promoter-TSS (NM_021338)	89	NM_021338	57808	Mm.19355	NM_021338	ENSMUSG00000060636	Rpl35a	2810431L15Rik|Rpl35	ribosomal protein L35A	protein-coding
unique_peak2-33509-4-17--2.19338551529556-2.18192634393779	chr11	73324698	73325381	+	0	NA	Intergenic	RMER3D-int|LTR|ERVK	5660	NM_146443	258435	Mm.377500	NM_146443	ENSMUSG00000095312	Olfr382	MOR135-14	olfactory receptor 382	protein-coding
common_peak2-29707-20-19-0.16614668970383-0.348739088570342	chr6	83124780	83125684	+	0	NA	intron (NM_001198866, intron 1 of 31)	RSINE1|SINE|B4	-4351	NM_007835	13191	Mm.6919	NM_007835	ENSMUSG00000031865	Dctn1	AL022633|Glued|p150|p150<glued>	dynactin 1	protein-coding
common_peak2-26043-186-231-0.456828922623472-3.30747202222415	chr2	14073168	14075012	+	0	NA	Intergenic	Intergenic	-22061	NM_001081310	625286	Mm.158781	NM_001081310	ENSMUSG00000061531	Tmem236	2010003H20Rik|Fam23a|Gm613	transmembrane protein 236	protein-coding
common_peak2-28013-39-22-1.09219929086214-2.58772382823801	chr4	46622780	46623911	+	0	NA	intron (NM_198664, intron 9 of 12)	intron (NM_198664, intron 9 of 12)	-8544	NM_001164804	107684	Mm.416311	NM_178893	ENSMUSG00000028337	Coro2a	9030208C03Rik|AI563590|IR10	coronin, actin binding protein 2A	protein-coding
common_peak2-21628-18-19--0.00900894365901106-0.306598483909153	chr11	101063606	101064282	+	0	NA	intron (NM_007970, intron 12 of 20)	B1_Mus1|SINE|Alu	23820	NM_007970	14055	Mm.5027	NM_007970	ENSMUSG00000006920	Ezh1	AW557915|mKIAA0388	enhancer of zeste homolog 1 (Drosophila)	protein-coding
unique_peak2-35937-6-4-0.24347001549294-0.989110657569874	chr19	9025460	9025889	+	0	NA	exon (NM_011842, exon 17 of 18)	exon (NM_011842, exon 17 of 18)	-2666	NM_197993	70044	Mm.165979	NM_197993	ENSMUSG00000071645	Tut1	2700038E08Rik|PAPD2|Rbm21|TUTase6	terminal uridylyl transferase 1, U6 snRNA-specific	protein-coding
unique_peak2-34779-8-11--0.579740082773585-1.14218153353838	chr15	59786509	59787100	+	0	NA	Intergenic	B4A|SINE|B4	61369	NM_027668	71088	Mm.425950	NM_027668	ENSMUSG00000071749	4933412E24Rik	-	RIKEN cDNA 4933412E24 gene	protein-coding
unique_peak2-36368-0-6--3.64748585253182-1.56314192529759	chr2	109991120	109991558	+	0	NA	Intergenic	B3A|SINE|B2	-100703	NR_040508	75517	Mm.363927	NR_040508	ENSMUSG00000086186	Ccdc34os	1700024P03Rik	coiled-coil domain containing 34, opposite strand	ncRNA
common_peak1-11097-41-57--0.156832290278912-0.350851889851556	chr15	59822597	59823683	+	0	NA	Intergenic	Intergenic	25033	NM_027668	71088	Mm.425950	NM_027668	ENSMUSG00000071749	4933412E24Rik	-	RIKEN cDNA 4933412E24 gene	protein-coding
unique_peak2-37190-6-6--0.241956811677302-0.947717972411649	chr4	57782478	57782948	+	0	NA	Intergenic	MER53|DNA|hAT	-75407	NM_009649	11641	Mm.467752	NM_009649	ENSMUSG00000038729	Akap2	AA959716|AI649048|Akap-2|Akap-kl|B230340M18Rik|Prka2	A kinase (PRKA) anchor protein 2	protein-coding
common_peak2-31079-55-52-0.476699416589503-1.13944189361449	chr8	24572331	24573679	+	0	NA	Intergenic	LTRIS2|LTR|ERV1	51031	NM_013834	20377	Mm.281691	NM_013834	ENSMUSG00000031548	Sfrp1	2210415K03Rik|AW011917|AW107218|AW742929|sFRP-1	secreted frizzled-related protein 1	protein-coding
common_peak1-13697-13-10-0.319040412000471-0.446472590016315	chr2	30319578	30320330	+	0	NA	Intergenic	RSINE1|SINE|B4	9765	NM_030244	72500	Mm.295464	NM_030244	ENSMUSG00000089762	Ier5l	2610524G09Rik	immediate early response 5-like	protein-coding
unique_peak1-5363-9-3-1.18961340640422-1.57096726280955	chr5	92931485	92932031	+	0	NA	intron (NM_007644, intron 1 of 11)	intron (NM_007644, intron 1 of 11)	2876	NM_007644	12492	Mm.297964	NM_007644	ENSMUSG00000029426	Scarb2	9330185J12Rik|Cd36l2|LGP85|LIMP-2|MLGP85	scavenger receptor class B, member 2	protein-coding
common_peak1-15772-17-13-0.410941416147434-0.546772548767014	chr4	153956440	153957141	+	0	NA	intron (NM_027504, intron 1 of 16)	intron (NM_027504, intron 1 of 16)	53686	NR_045643	320939	Mm.436738	NR_045643		5930403L14Rik	-	RIKEN cDNA 5930403L14 gene	ncRNA
common_peak1-8663-42-50-0.0699039858956887-0.334445504886124	chr10	128322074	128323192	+	0	NA	intron (NM_010272, intron 2 of 2)	intron (NM_010272, intron 2 of 2)	6141	NM_010272	14561	Mm.299218	NM_010272		Gdf11	BMP-11|Bmp11	growth differentiation factor 11	protein-coding
unique_peak2-32927-1-7--2.62705701021674-1.80617997398389	chr10	26015036	26015451	+	0	NA	intron (NM_172787, intron 17 of 21)	intron (NM_172787, intron 17 of 21)	65730	NM_001115154	268288	Mm.213322	NM_001013766	ENSMUSG00000051354	Samd3	Gm623	sterile alpha motif domain containing 3	protein-coding
unique_peak2-39398-4-10--1.48289213249054-1.5150158574804	chr9	30895981	30896484	+	0	NA	TTS (NM_011176)	TTS (NM_011176)	43152	NM_011176	19143	Mm.243926	NM_011176	ENSMUSG00000031995	St14	Epithin|MT-SP1|Prss14|Tmprss14|mCAP3|matriptase	suppression of tumorigenicity 14 (colon carcinoma)	protein-coding
common_peak1-8142-26-16-0.840436250908123-1.24110690293937	chr1	191074817	191075779	+	0	NA	intron (NM_001281847, intron 5 of 6)	intron (NM_001281847, intron 5 of 6)	91934	NM_001159850	16526	Mm.33304	NM_010607	ENSMUSG00000037624	Kcnk2	A430027H14Rik|AI848635|TREK-1	potassium channel, subfamily K, member 2	protein-coding
unique_peak1-2179-13-1-2.77847203063777-3.64038867156802	chr15	62116356	62116935	+	0	NA	Intergenic	(GGGA)n|Simple_repeat|Simple_repeat	-65639	NR_003523	67552	Mm.484027	NM_026230		H2afy3	4933432H23Rik	H2A histone family, member Y3	pseudo
common_peak2-26514-26-32--0.116495027199991-0.315041925765944	chr2	90745437	90746163	+	0	NA	promoter-TSS (NM_026688)	promoter-TSS (NM_026688)	857	NM_025991	67136	Mm.330394	NM_025991	ENSMUSG00000005505	Kbtbd4	2510026C23Rik	kelch repeat and BTB (POZ) domain containing 4	protein-coding
common_peak2-29435-96-122-0.223536709016089-0.696591702454409	chr6	13607184	13608516	+	0	NA	intron (NM_175312, intron 2 of 4)	Lx7|LINE|L1	20116	NM_175312	101148	Mm.354863	NM_175312	ENSMUSG00000042742	B630005N14Rik	AI666701	RIKEN cDNA B630005N14 gene	protein-coding
common_peak1-13344-28-24-0.409102930046738-0.610902792227729	chr19	44266929	44268261	+	0	NA	promoter-TSS (NM_181422)	promoter-TSS (NM_181422)	-663	NM_181422	329064	Mm.308481	NM_181422	ENSMUSG00000037578	Pkd2l1	B830002B15|BC046386|PCL|PKD2L|Pkdl|TRPP3	polycystic kidney disease 2-like 1	protein-coding
common_peak1-11771-11-27--1.29866133780599-1.81053432848961	chr16	44347413	44348018	+	0	NA	intron (NM_144550, intron 1 of 17)	CpG	201	NM_144550	212514	Mm.24035	NM_144550	ENSMUSG00000043065	Spice1	Ccdc52|D16Ertd480e	spindle and centriole associated protein 1	protein-coding
unique_peak1-4629-7-2-1.21412832957703-1.45399745587252	chr3	83992378	83992899	+	0	NA	intron (NM_030706, intron 6 of 11)	RSINE1|SINE|B4	14078	NR_036654	624713	Mm.442604	NR_036654		Gm6525	EG624713	ribosomal protein L36a pseudogene	pseudo
unique_peak1-6952-18-5-1.7279566505072-2.39372960542229	chr8	111704966	111705827	+	0	NA	Intergenic	L1M4|LINE|L1	159412	NR_002928	384864	Mm.390083	NR_002928		Gm1943	-	WD repeat domain 70 pseudogene	pseudo
common_peak1-8812-48-66--0.0951620392229575-0.316181169053401	chr11	21091241	21092200	+	0	NA	Intergenic	RLTR45-int|LTR|ERVK	-47315	NM_139061	245944	Mm.170103	NM_139061	ENSMUSG00000020128	Vps54	Hcc8|Vps54l|mSLP8|wr	vacuolar protein sorting 54 (yeast)	protein-coding
unique_peak1-2080-14-4-1.57728806547028-2.4322161449009	chr15	36875066	36875645	+	0	NA	Intergenic	L2a|LINE|L2	61802	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
unique_peak2-37542-1-9--2.94898510510411-2.31132995230379	chr5	30666823	30667214	+	0	NA	intron (NM_001033460, intron 16 of 16)	ID_B1|SINE|B4	59104	NM_001033460	381738	Mm.389604	NM_001033460	ENSMUSG00000073102	Drc1	Ccdc164|Gm1060|b2b1654Clo	dynein regulatory complex subunit 1	protein-coding
common_peak2-22497-7-5-0.214128329577033-1.01466476204226	chr13	51853589	51853927	+	0	NA	intron (NM_001281880, intron 2 of 16)	intron (NM_001281880, intron 2 of 16)	35358	NM_001281880	20354	Mm.33903	NM_013660	ENSMUSG00000021451	Sema4d	CD100|Semacl2|Semaj|Semcl2|coll-4	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D	protein-coding
common_peak1-16744-23-15-0.721767504509081-0.949797625454541	chr6	31317591	31318288	+	0	NA	intron (NR_040300, intron 2 of 2)	intron (NR_040300, intron 2 of 2)	30834	NR_040300	100503869	Mm.370532	NR_040300	ENSMUSG00000086212	Mkln1os	Gm13845|OTTMUSG00000014733	muskelin 1, intracellular mediator containing kelch motifs, opposite strand	ncRNA
common_peak2-20134-17-13-0.410941416147434-0.546772548767014	chr1	166044585	166045370	+	0	NA	promoter-TSS (NM_011347)	promoter-TSS (NM_011347)	-418	NM_011347	20344	Mm.3337	NM_011347	ENSMUSG00000026580	Selp	CD62P|GMP-140|Grmp|LECAM3|PADGEM	selectin, platelet	protein-coding
common_peak2-29412-56-71-0.065670823996931-0.324829931509269	chr6	140623049	140625176	+	0	NA	intron (NM_009637, intron 8 of 8)	B3|SINE|B2	51293	NM_009637	11569	Mm.86453	NM_009637	ENSMUSG00000030232	Aebp2	AU023766|B230313N05Rik	AE binding protein 2	protein-coding
unique_peak2-38882-2-7--1.91745425626332-1.45399745587252	chr8	3423702	3424182	+	0	NA	intron (NM_133962, intron 1 of 19)	intron (NM_133962, intron 1 of 19)	30934	NM_133962	102098	Mm.170461	NM_133962	ENSMUSG00000004568	Arhgef18	AI467246|D030053O22Rik	rho/rac guanine nucleotide exchange factor (GEF) 18	protein-coding
common_peak2-32196-19-38--0.882714892200562-1.37991291380345	chr9	119339500	119340434	+	0	NA	intron (NM_007397, intron 6 of 9)	intron (NM_007397, intron 6 of 9)	-14074	NM_001172136	208194	Mm.101578	NM_172456	ENSMUSG00000042787	Exog	AW557704|ENGL-B|ENGL-a|Endogl1|Endogl2|Engl|Engla|Englb	endo/exonuclease (5'-3'), endonuclease G-like	protein-coding
unique_peak1-875-8-3-1.00522241794757-1.39487600375387	chr11	31139157	31139621	+	0	NA	Intergenic	MTC|LTR|MaLR	130672	NM_011491	20856	Mm.32506	NM_011491		Stc2	AW125853|Stc2l|mustc2	stanniocalcin 2	protein-coding
unique_peak1-5958-18-1-3.31291915122835-4.8766546284749	chr6	93180580	93181319	+	0	NA	Intergenic	(TCTCCC)n|Simple_repeat|Simple_repeat	290373	NR_015530	330385	Mm.483472	NR_015530	ENSMUSG00000097462	9530026P05Rik	B430306B02	RIKEN cDNA 9530026P05 gene	ncRNA
common_peak2-22705-33-29-0.42444696691701-0.683454027796267	chr13	100832838	100833470	+	0	NA	intron (NM_001081061, intron 16 of 38)	B2_Mm1t|SINE|B2	40871	NM_001081061	544971	Mm.288546	NM_001081061	ENSMUSG00000049658	Bdp1	AI662220|AW049390|AW456745|B130055N23Rik|G630013P12Rik|TAF3B1|TFC5|TFIIIB150|TFIIIB90|Tfnr|mKIAA1241	B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB	protein-coding
common_peak1-7735-21-10-1.11005764662894-1.59083646988122	chr1	89089407	89090583	+	0	NA	intron (NM_021600, intron 6 of 11)	intron (NM_021600, intron 6 of 11)	2823	NM_021600	11447	Mm.2811	NM_021600	ENSMUSG00000026251	Chrnd	Achr-4|Acrd|L10076	cholinergic receptor, nicotinic, delta polypeptide	protein-coding
unique_peak2-38222-7-8--0.370834171144123-1.00793137938329	chr6	115221606	115222031	+	0	NA	intron (NM_013681, intron 10 of 10)	intron (NM_013681, intron 10 of 10)	-19951	NM_080639	110595	Mm.255607	NM_080639	ENSMUSG00000030317	Timp4	TIMP-4	tissue inhibitor of metalloproteinase 4	protein-coding
unique_peak1-680-13-5-1.19350952991661-1.95509489018123	chr10	75518046	75518485	+	0	NA	Intergenic	ETnERV2-int|LTR|ERVK	22908	NM_177475	64453	Mm.80609	NM_177475	ENSMUSG00000049764	Zfp280b	D10Jhu82e|Suhw2	zinc finger protein 280B	protein-coding
common_peak1-16385-10-12--0.344024373132323-0.340565874754526	chr5	123720403	123720991	+	0	NA	Intergenic	Intergenic	42498	NM_026000	67151	Mm.278997	NM_026000	ENSMUSG00000029440	Psmd9	1500011J20Rik|2610202L11Rik|Bridge-1|P27	proteasome (prosome, macropain) 26S subunit, non-ATPase, 9	protein-coding
unique_peak1-5721-12-1-2.64877598508764-3.36932189928148	chr6	42250467	42251060	+	0	NA	intron (NM_013491, intron 12 of 22)	intron (NM_013491, intron 12 of 22)	14079	NM_013491	12723	Mm.386757	NM_013491	ENSMUSG00000029862	Clcn1	Clc-1|Clc1|SMCC1|adr|mto|myotonia|nmf355	chloride channel 1	protein-coding
common_peak2-24062-46-85--0.528268811453296-1.24170275160341	chr16	30063015	30064303	+	0	NA	Intergenic	CpG	-1784	NM_008235	15205	Mm.390859	NM_008235	ENSMUSG00000022528	Hes1	Hry|bHLHb39	hairy and enhancer of split 1 (Drosophila)	protein-coding
common_peak1-18443-12-9-0.326847890200276-0.459837087125828	chr8	82346689	82347328	+	0	NA	Intergenic	L1Md_F2|LINE|L1	111289	NM_026904	68999	Mm.257445	NM_026904	ENSMUSG00000036977	Anapc10	1500026N15Rik|A830003M23Rik|APC10	anaphase promoting complex subunit 10	protein-coding
unique_peak1-6669-9-3-1.18961340640422-1.57096726280955	chr8	18769417	18769945	+	0	NA	intron (NM_173189, intron 12 of 13)	intron (NM_173189, intron 12 of 13)	-28119	NM_007426	11601	Mm.439874	NM_007426	ENSMUSG00000031465	Angpt2	Agpt2|Ang-2|Ang2	angiopoietin 2	protein-coding
common_peak1-15390-12-20--0.743541437691122-0.625923329873571	chr4	76423975	76424667	+	0	NA	intron (NM_011211, intron 8 of 39)	intron (NM_011211, intron 8 of 39)	1433478	NM_011211	19266	Mm.184021	NM_011211	ENSMUSG00000028399	Ptprd	1110002J03Rik|3000002J10Rik|B230219D21Rik|R-PTP-delta	protein tyrosine phosphatase, receptor type, D	protein-coding
common_peak2-24693-19-13-0.595332404604082-0.713635438203849	chr17	44711264	44711783	+	0	NA	intron (NR_073425, intron 5 of 5)	intron (NR_073425, intron 5 of 5)	161602	NR_073425	12393	Mm.391013	NM_009820	ENSMUSG00000039153	Runx2	AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a	runt related transcription factor 2	protein-coding
unique_peak1-2319-14-1-2.89921616035764-3.91338994363176	chr15	82340914	82341595	+	0	NA	Intergenic	RMER17C-int|LTR|ERVK	-44274	NM_201360	380997	Mm.482248	NM_201360	ENSMUSG00000096852	Cyp2d12	9030605E09Rik	cytochrome P450, family 2, subfamily d, polypeptide 12	protein-coding
common_peak1-7641-18-11-0.727956650507195-0.876666802405043	chr1	71100323	71101194	+	0	NA	intron (NM_007525, intron 6 of 10)	intron (NM_007525, intron 6 of 10)	48788	NM_007525	12021	Mm.10764	NM_007525	ENSMUSG00000026196	Bard1	ENSMUSG00000060893|ENSMUSG00000073653	BRCA1 associated RING domain 1	protein-coding
common_peak2-22196-19-11-0.81772482594053-0.991115276827166	chr12	110601678	110602315	+	0	NA	Intergenic	RLTR20D|LTR|ERVK	-89037	NR_033813	13386	Mm.157069	NM_010052	ENSMUSG00000040856	Dlk1	AW742678|DLK-1|DlkI|FA1|Ly107|Peg9|SCP1|ZOG|pG2|pref-1	delta-like 1 homolog (Drosophila)	protein-coding
unique_peak2-33132-4-5--0.608423014574403-0.909929411522249	chr10	81846319	81846760	+	0	NA	Intergenic	Intergenic	108824	NM_001255990	432480	Mm.280394	NM_001255990	ENSMUSG00000094186	Gm1553	Lcrn	predicted gene 1553	protein-coding
common_peak2-20596-8-5-0.420259917226415-1.10484139239135	chr10	79701619	79701965	+	0	NA	intron (NM_023431, intron 9 of 13)	RSINE1|SINE|B4	-10405	NM_029272	75406	Mm.28712	NM_029272	ENSMUSG00000020153	Ndufs7	1010001M04Rik	NADH dehydrogenase (ubiquinone) Fe-S protein 7	protein-coding
common_peak2-22424-5-14--1.61127093161437-1.95509489018123	chr13	37457238	37457848	+	0	NA	intron (NM_010745, intron 1 of 4)	RMER15|LTR|ERVL	20329	NM_010745	17084	Mm.2639	NM_010745	ENSMUSG00000021423	Ly86	MD-1|MD1	lymphocyte antigen 86	protein-coding
common_peak2-21933-32-52--0.448828435343539-0.705686442909787	chr12	25097960	25099518	+	0	NA	Intergenic	Intergenic	-84707	NM_020614	21340	Mm.39082	NM_020614	ENSMUSG00000059669	Taf1b	4930408G01Rik|A230108M10Rik|TAFI68|Tafi86	TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B	protein-coding
unique_peak2-38449-5-5--0.289342836727009-0.909929411522249	chr7	28361458	28361779	+	0	NA	intron (NM_175107, intron 8 of 9)	(TG)n|Simple_repeat|Simple_repeat	-14961	NM_001110208	11652	Mm.177194	NM_007434	ENSMUSG00000004056	Akt2	2410016A19Rik|AW554154|PKB|PKBbeta	thymoma viral proto-oncogene 2	protein-coding
common_peak2-21257-9-8-0.0196884049619079-1.03275496310833	chr11	69410806	69411277	+	0	NA	Intergenic	B3|SINE|B2	8421	NM_013415	11932	Mm.235204	NM_013415	ENSMUSG00000041329	Atp1b2	Amog|Atpb-2	ATPase, Na+/K+ transporting, beta 2 polypeptide	protein-coding
common_peak2-21555-19-15-0.402687326661686-0.519193887192487	chr11	96934502	96935158	+	0	NA	Intergenic	B2_Mm2|SINE|B2	9748	NR_106181	102465893		NR_106181		Mir8103	mmu-mir-8103	microRNA mir-8103	ncRNA
unique_peak2-38157-6-7--0.434601889619698-0.97990265578305	chr6	87069481	87069794	+	0	NA	Intergenic	RLTR44C|LTR|ERVK	14897	NM_001167937	52372	Mm.282851	NM_001167937		D6Ertd527e	AU043841	DNA segment, Chr 6, ERATO Doi 527, expressed	protein-coding
unique_peak2-36315-5-7--0.704380336005853-1.01466476204226	chr2	78410781	78411246	+	0	NA	Intergenic	Intergenic	-298191	NM_009454	22193	Mm.1485	NM_009454		Ube2e3	Ubce4|ubcM2	ubiquitin-conjugating enzyme E2E 3	protein-coding
common_peak1-11166-19-11-0.81772482594053-0.991115276827166	chr15	76199918	76201014	+	0	NA	intron (NM_021555, intron 3 of 5)	intron (NM_021555, intron 3 of 5)	1138	NM_021555	59053	Mm.133202	NM_021555	ENSMUSG00000022554	Hgh1	Brp16|D15Ertd741e|Fam203a	HGH1 homolog	protein-coding
unique_peak1-1197-12-5-1.06381348436648-1.78669045979184	chr11	103245834	103246625	+	0	NA	intron (NM_183034, intron 5 of 11)	intron (NM_183034, intron 5 of 11)	-21223	NM_001205236	544817	Mm.259113	NM_133715	ENSMUSG00000034255	Arhgap27	2310069I04Rik|5730442P18Rik|Gm21552|Sh3d20	Rho GTPase activating protein 27	protein-coding
unique_peak1-505-33-12-1.63089784438444-3.75499050687144	chr1	181015348	181016863	+	0	NA	intron (NM_027188, intron 8 of 11)	intron (NM_027188, intron 8 of 11)	432029	NM_027188	69726	Mm.222338	NM_027188		Smyd3	2410008A19Rik|Zmynd1	SET and MYND domain containing 3	protein-coding
common_peak2-30783-7-7--0.200909169701811-0.97990265578305	chr7	126649300	126649629	+	0	NA	intron (NM_027943, intron 3 of 11)	L1Md_T|LINE|L1	17532	NM_027943	71830	Mm.84631	NM_027943	ENSMUSG00000030968	Pdilt	1700007B13Rik	protein disulfide isomerase-like, testis expressed	protein-coding
common_peak2-30710-22-36--0.562169260541546-0.734130039933318	chr7	112696432	112698006	+	0	NA	Intergenic	B1F2|SINE|Alu	-5655	NM_011421	20597	Mm.4628	NM_011421	ENSMUSG00000037049	Smpd1	A-SMase|ASM|Zn-SMase|aSMase	sphingomyelin phosphodiesterase 1, acid lysosomal	protein-coding
common_peak1-14915-29-21-0.652858461977813-1.06916698217164	chr3	98055720	98057028	+	0	NA	Intergenic	RMER4B|LTR|ERVK	-27980	NM_008256	15360	Mm.289131	NM_008256	ENSMUSG00000027875	Hmgcs2	1300002P16|mHS	3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2	protein-coding
common_peak1-10722-11-26--1.24619391791185-1.66030262873422	chr14	62761412	62761970	+	0	NA	Intergenic	Intergenic	150125	NM_173419	239133	Mm.127330	NM_173419	ENSMUSG00000048281	Dleu7	BC038059	deleted in lymphocytic leukemia, 7	protein-coding
unique_peak2-39400-9-6-0.382258484346616-1.11707584880836	chr9	31261628	31262092	+	0	NA	intron (NM_144936, intron 1 of 5)	B1_Mus2|SINE|Alu	9963	NM_144936	235135	Mm.390134	NM_144936	ENSMUSG00000041737	Tmem45b	BC018222	transmembrane protein 45b	protein-coding
common_peak1-11719-34-22-0.858506570944253-1.68120055799038	chr16	32676396	32677290	+	0	NA	intron (NM_001110147, intron 10 of 13)	intron (NM_001110147, intron 10 of 13)	3603	NM_001289443	51789	Mm.251115	NM_016788	ENSMUSG00000022791	Tnk2	Ack|Ack-1|Ack1|Cdgip|Pyk1	tyrosine kinase, non-receptor, 2	protein-coding
unique_peak2-36011-5-6--0.511735258063458-0.947717972411649	chr19	38639715	38639993	+	0	NA	intron (NM_019588, intron 1 of 31)	Lx|LINE|L1	41167	NM_019588	74055	Mm.34031	NM_019588	ENSMUSG00000024998	Plce1	4933403A21Rik|PLCepsilon|Plce|mKIAA1516	phospholipase C, epsilon 1	protein-coding
common_peak1-16531-72-135--0.418879028378021-1.30205723017424	chr5	142906033	142907980	+	0	NA	intron (NM_199068, intron 1 of 8)	intron (NM_199068, intron 1 of 8)	29555	NM_199068	17425	Mm.24214	NM_010812	ENSMUSG00000056493	Foxk1	A630048H08Rik|AI463295|ENSMUSG00000075577|Gm10868|Mnf	forkhead box K1	protein-coding
common_peak1-15209-13-20--0.613845392140992-0.532159081577619	chr4	74252037	74252679	+	0	NA	Intergenic	Intergenic	354575	NM_144787	76804	Mm.209059	NM_144787	ENSMUSG00000028397	Kdm4c	2410141F18Rik|AA517467|Gasc1|Jmjd2c	lysine (K)-specific demethylase 4C	protein-coding
unique_peak2-37025-2-4--1.23938235115068-0.931118710592187	chr3	126911931	126912246	+	0	NA	Intergenic	Intergenic	47865	NR_105029	100862268	Mm.444603	NR_105029	ENSMUSG00000097456	LOC100862268	-	uncharacterized LOC100862268	ncRNA
common_peak1-8948-46-37-0.650068429805216-1.49662016474183	chr11	54061426	54062897	+	0	NA	intron (NM_009969, intron 2 of 3)	intron (NM_009969, intron 2 of 3)	1240	NM_009969	12981	Mm.4922	NM_009969		Csf2	Csfgm|GMCSF|Gm-CSf|MGI-IGM	colony stimulating factor 2 (granulocyte-macrophage)	protein-coding
unique_peak2-36072-12-17--0.521149016354673-0.417187467413082	chr19	53732177	53732721	+	0	NA	Intergenic	Intergenic	-19347	NM_001170847	73713	Mm.313695	NM_001170847	ENSMUSG00000043639	Rbm20	1110018J23Rik|2010003H22Rik|AI646761	RNA binding motif protein 20	protein-coding
common_peak1-9478-12-20--0.743541437691122-0.625923329873571	chr11	106487227	106487828	+	0	NA	Intergenic	Intergenic	-13283	NM_198292	21763	Mm.102407	NM_198292	ENSMUSG00000040548	Tex2	4930568E07Rik|AI553404|Def-5|Taz4	testis expressed gene 2	protein-coding
unique_peak2-34311-3-6--1.22133801201688-1.08602067057793	chr13	94150587	94150995	+	0	NA	intron (NM_001284189, intron 5 of 8)	intron (NM_001284189, intron 5 of 8)	72802	NM_152134	26556	Mm.37533	NM_011982		Homer1	PSD-Zip45|SYN47|Ves-1|homer-1|vesl-1	homer homolog 1 (Drosophila)	protein-coding
common_peak1-11174-10-8-0.186490343566457-1.078512453669	chr15	76368841	76369334	+	0	NA	promoter-TSS (NM_013909)	promoter-TSS (NM_013909)	89	NM_013909	30840	Mm.275279	NM_013909	ENSMUSG00000022559	Fbxl6	AU021795|Fbl6	F-box and leucine-rich repeat protein 6	protein-coding
common_peak1-18370-13-17--0.391452970804544-0.364171515310935	chr8	70523299	70523846	+	0	NA	Intergenic	Intergenic	-25099	NM_177698	234353	Mm.32525	NM_027626	ENSMUSG00000030465	Psd3	4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D	pleckstrin and Sec7 domain containing 3	protein-coding
common_peak2-21020-52-44-0.616406893936024-1.5120604183303	chr11	31137399	31138943	+	0	NA	Intergenic	Intergenic	131890	NM_011491	20856	Mm.32506	NM_011491		Stc2	AW125853|Stc2l|mustc2	stanniocalcin 2	protein-coding
common_peak1-12551-393-569-0.464237161764654-7.87992987600324	chr18	6489600	6491384	+	0	NA	TTS (NR_035446)	TTS (NR_035446)	152	NR_035446	100316773		NR_035446		Mir1893	Mirn1893|mmu-mir-1893	microRNA 1893	ncRNA
common_peak1-10163-7-14--1.10779976531033-0.817533494790411	chr13	37827352	37827800	+	0	NA	Intergenic	Intergenic	-90331	NM_026830	68750	Mm.491109	NM_026830	ENSMUSG00000039087	Rreb1	1110037N09Rik|AA414966|B930013M22Rik	ras responsive element binding protein 1	protein-coding
common_peak2-21832-10-11--0.228547155712387-0.31137425193576	chr11	120507867	120508514	+	0	NA	3' UTR (NM_026751, exon 1 of 1)	3' UTR (NM_026751, exon 1 of 1)	1461	NM_026751	68515	Mm.194594	NM_026751	ENSMUSG00000025141	Myadml2	1110012N22Rik	myeloid-associated differentiation marker-like 2	protein-coding
common_peak1-12208-19-35--0.767237674780626-1.06916698217164	chr17	33824500	33825234	+	0	NA	non-coding (NR_045523, exon 5 of 6)	non-coding (NR_045523, exon 5 of 6)	-2464	NM_029804	76936	Mm.311439	NM_029804	ENSMUSG00000059208	Hnrnpm	2610023M21Rik|AA409009|Hnrpm|mKIAA4193	heterogeneous nuclear ribonucleoprotein M	protein-coding
common_peak1-8610-59-50-0.652938658901083-1.81799280824917	chr10	116191261	116193278	+	0	NA	Intergenic	Intergenic	-26036	NR_045345	72286	Mm.396207	NR_045345		1700030O20Rik	-	RIKEN cDNA 1700030O20 gene	ncRNA
unique_peak2-39932-8-23--1.57974008277359-1.94520747672513	chrX	106187283	106188054	+	0	NA	Intergenic	Intergenic	-9156	NR_033596	70550	Mm.482937	NR_033596	ENSMUSG00000081793	5730416F02Rik	-	capping protein (actin filament), gelsolin-like pseudogene	pseudo
common_peak1-7506-25-40--0.495702099272978-0.683454027796267	chr1	16227906	16229142	+	0	NA	intron (NM_001111272, intron 11 of 12)	intron (NM_001111272, intron 11 of 12)	132561	NM_133832	98711	Mm.274376	NM_133832		Rdh10	3110069K09Rik|4921506A21Rik|AI875664|AW549993|D1Ertd762e|m366Asp	retinol dehydrogenase 10 (all-trans)	protein-coding
common_peak1-7606-121-116-0.697001062294594-4.2257630968388	chr1	58710346	58712262	+	0	NA	intron (NR_045007, intron 1 of 1)	intron (NR_045007, intron 1 of 1)	1819	NR_045007	100504501	Mm.440933	NR_045007		Gm20257	-	caspase 8 pseudogene	pseudo
common_peak1-17303-19-9-1.08075923177432-1.37307999835977	chr6	137569177	137569948	+	0	NA	intron (NM_007945, intron 1 of 21)	intron (NM_007945, intron 1 of 21)	28244	NM_001271588	13860	Mm.235346	NM_007945	ENSMUSG00000015766	Eps8	AW261790	epidermal growth factor receptor pathway substrate 8	protein-coding
common_peak2-28859-6-9--0.75652998450706-1.11707584880836	chr5	74068370	74068769	+	0	NA	intron (NM_178387, intron 11 of 12)	intron (NM_178387, intron 11 of 12)	25950	NM_178387	73472	Mm.87067	NM_178387	ENSMUSG00000029155	Spata18	1700067I02Rik	spermatogenesis associated 18	protein-coding
common_peak1-14437-78-121--0.123916243402352-0.376537733660042	chr2	181286964	181288386	+	0	NA	TTS (NM_001271585)	TTS (NM_001271585)	-25510	NR_027289	100271841	Mm.438007	NR_027289	ENSMUSG00000010492	Uckl1os	Gm16119|OTTMUSG00000030649	uridine-cytidine kinase 1-like 1, opposite strand	ncRNA
common_peak1-7759-55-30-1.25042356076583-4.47346715932702	chr1	91577968	91579471	+	0	NA	intron (NR_015540, intron 1 of 3)	intron (NR_015540, intron 1 of 3)	1748	NR_015540	74403	Mm.444291	NR_015540		4933400F21Rik	1700091C04Rik|4930565K10Rik	RIKEN cDNA 4933400F21 gene	ncRNA
common_peak2-25724-15-7-1.01216475055566-1.08658567012551	chr19	23968152	23968589	+	0	NA	exon (NM_177034, exon 2 of 13)	exon (NM_177034, exon 2 of 13)	135004	NM_177034	319924	Mm.22879	NM_177034	ENSMUSG00000024897	Apba1	6430513E09Rik|Lin-10|Mint|Mint1|Urop11|X11|X11alpha	amyloid beta (A4) precursor protein binding, family A, member 1	protein-coding
common_peak2-31615-4-5--0.608423014574403-0.909929411522249	chr8	122989725	122990076	+	0	NA	Intergenic	Intergenic	-22866	NM_198671	382034	Mm.334856	NM_198671	ENSMUSG00000031822	Gse1	2210013I18Rik|mKIAA0182	genetic suppressor element 1	protein-coding
common_peak2-23093-38-56--0.261437354866211-0.434791164020309	chr14	76556165	76557362	+	0	NA	Intergenic	MERVL_2A-int|LTR|ERVL	46065	NM_013745	27275	Mm.21138	NM_013745	ENSMUSG00000022009	Nufip1	Nufip	nuclear fragile X mental retardation protein interacting protein 1	protein-coding
common_peak2-22792-11-12--0.191746133889479-0.310474156842889	chr14	7933624	7934238	+	0	NA	intron (NM_001024712, intron 2 of 6)	intron (NM_001024712, intron 2 of 6)	4040	NM_001024712	100042149	Mm.396155	NM_001024712	ENSMUSG00000092167	Gm3696	544988|ENSMUSG00000056940|Gm10014	predicted gene 3696	protein-coding
common_peak1-15159-8-6-0.197867495889966-1.03789460276074	chr3	146500879	146501256	+	0	NA	Intergenic	MTC|LTR|MaLR	-14264	NM_027594	70892	Mm.187793	NM_027594	ENSMUSG00000036745	Ttll7	1110049N09Rik|4921517B04Rik|C630030B20|Ttll7s	tubulin tyrosine ligase-like family, member 7	protein-coding
common_peak2-23875-33-39-0.00940946763816619-0.303778768325576	chr15	103240367	103241130	+	0	NA	intron (NM_028797, intron 6 of 8)	B1_Mus2|SINE|Alu	20110	NM_028797	74174	Mm.325325	NM_028797	ENSMUSG00000022487	Gtsf1	1700006H03Rik|Cue110	gametocyte specific factor 1	protein-coding
common_peak2-31019-41-36-0.49169533921971-0.936258361511365	chr8	11346170	11347348	+	0	NA	intron (NM_009932, intron 3 of 47)	intron (NM_009932, intron 3 of 47)	33930	NM_009932	12827	Mm.181021	NM_009932	ENSMUSG00000031503	Col4a2	Col4a-2	collagen, type IV, alpha 2	protein-coding
common_peak2-27026-47-76--0.331945115928353-0.658374650198586	chr2	174110000	174111133	+	0	NA	exon (NM_019690, exon 2 of 5)	exon (NM_019690, exon 2 of 5)	745	NM_022000	14683	Mm.125770	NM_010309	ENSMUSG00000027523	Gnas	5530400H20Rik|A930027G11Rik|C130027O20Rik|GPSA|GSP|Galphas|Gnas1|Gnasxl|Gsa|Nesp|Nespl|Oed-Sml|Oedsml|P1|P2|P3|PHP1A|PHP1B|POH	GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	protein-coding
common_peak2-29072-34-34-0.2527855100563-0.484230028934922	chr5	118154904	118155424	+	0	NA	intron (NM_001114545, intron 12 of 19)	intron (NM_001114545, intron 12 of 19)	-161964	NM_008712	18125	Mm.44249	NM_008712	ENSMUSG00000029361	Nos1	2310005C01Rik|NO|NOS-I|Nos-1|bNOS|nNOS	nitric oxide synthase 1, neuronal	protein-coding
common_peak2-29326-12-8-0.478850983645327-0.562038191119709	chr5	146916287	146916782	+	0	NA	intron (NM_001105160, intron 11 of 12)	intron (NM_001105160, intron 11 of 12)	25700	NM_001105160	100041449	Mm.301900	NM_001105160	ENSMUSG00000061292	Cyp3a59	ENSMUSG00000061292	cytochrome P450, family 3, subfamily a, polypeptide 59	protein-coding
common_peak2-27588-32-64--0.743275793808794-1.63192341342353	chr3	101603137	101604696	+	0	NA	Intergenic	Intergenic	36230	NM_172295	242125	Mm.32900	NM_172295	ENSMUSG00000044313	Mab21l3	-	mab-21-like 3 (C. elegans)	protein-coding
common_peak1-12820-55-39-0.882691776265339-2.69422232619315	chr18	67983467	67985766	+	0	NA	intron (NM_027556, intron 14 of 45)	intron (NM_027556, intron 14 of 45)	24855	NM_027556	70799	Mm.30857	NM_027556	ENSMUSG00000024542	Cep192	4631422C13Rik|D430014P18Rik	centrosomal protein 192	protein-coding
common_peak2-24264-13-38--1.50693018822448-2.79998507211557	chr16	93832206	93832904	+	0	NA	exon (NM_001045529, exon 1 of 17)	exon (NM_001045529, exon 1 of 17)	189	NM_001045529	338467	Mm.287329	NM_001045529	ENSMUSG00000039456	Morc3	1110051N18Rik|AI452146|BF318192|D16Jhu32e|NXP2|Zcwcc3	microrchidia 3	protein-coding
common_peak2-30959-25-40--0.495702099272978-0.683454027796267	chr8	92356510	92357765	+	0	NA	Intergenic	Intergenic	515014	NM_172913	244579	Mm.302755	NM_172913	ENSMUSG00000043668	Tox3	500-9|BC052044|C230068E13|CAGF9|Tnrc9	TOX high mobility group box family member 3	protein-coding
common_peak2-32033-72-48-1.05387396875711-4.61863740065277	chr9	77910482	77911661	+	0	NA	intron (NM_008103, intron 5 of 5)	intron (NM_008103, intron 5 of 5)	11306	NM_008103	14531	Mm.1400	NM_008103	ENSMUSG00000023333	Gcm1	GCMa|Gcm-rs2|Gcm1-rs1|glide	glial cells missing homolog 1 (Drosophila)	protein-coding
unique_peak1-6050-19-6-1.59533240460408-2.21753093801298	chr6	115526707	115527501	+	0	NA	intron (NM_199033, intron 11 of 11)	intron (NM_199033, intron 11 of 11)	15490	NM_001101431	70291	Mm.133694	NM_001101431		Mkrn2os	2510049J12Rik	makorin, ring finger protein 2, opposite strand	protein-coding
common_peak1-12120-132-133-0.652359001625093-4.17511057590275	chr17	26616208	26620117	+	0	NA	Intergenic	Intergenic	27255	NM_013642	19252	Mm.239041	NM_013642	ENSMUSG00000024190	Dusp1	3CH134|MKP1|Ptpn16|U19515|erp|mkp-1	dual specificity phosphatase 1	protein-coding
unique_peak1-7325-10-2-1.77145284428761-2.09384600808989	chr9	121434668	121435241	+	0	NA	Intergenic	Intergenic	-30142	NM_031161	12424	Mm.2619	NM_031161	ENSMUSG00000032532	Cck	-	cholecystokinin	protein-coding
common_peak1-8955-17-10-0.75886471956774-0.917676348953458	chr11	54936946	54937680	+	0	NA	Intergenic	Intergenic	25826	NM_010299	14667	Mm.287807	NM_010299	ENSMUSG00000000594	Gm2a	AA408702|AW215435|GM2-AP|SAP-3	GM2 ganglioside activator protein	protein-coding
unique_peak2-33760-2-4--1.23938235115068-0.931118710592187	chr11	117792501	117792928	+	0	NA	Intergenic	Intergenic	37966	NM_007707	12702	Mm.3468	NM_007707	ENSMUSG00000053113	Socs3	Cis3|Cish3|EF-10|Ef10|SSI-3|Ssi3	suppressor of cytokine signaling 3	protein-coding
unique_peak2-36102-6-14--1.34149248522822-1.01572999746118	chr2	11501447	11502164	+	0	NA	Intergenic	MURVY-LTR|LTR|ERV1	23021	NM_152824	76938	Mm.182769	NM_152824	ENSMUSG00000037197	Rbm17	2700027J02Rik	RNA binding motif protein 17	protein-coding
unique_peak2-38185-1-10--3.08648862885404-2.57096726280955	chr6	95039844	95040385	+	0	NA	Intergenic	Intergenic	-27760	NM_001102670	243574	Mm.333275	NM_001008785	ENSMUSG00000030031	Kbtbd8	AU040152|SSEC-51|SSEC51|Takrp|mKIAA1842	kelch repeat and BTB (POZ) domain containing 8	protein-coding
common_peak1-10221-9-20--1.20270401637454-1.23014042908325	chr13	50417881	50418400	+	0	NA	Intergenic	Intergenic	60956	NR_045474	69211	Mm.259768	NR_045474		2310081J21Rik	-	RIKEN cDNA 2310081J21 gene	ncRNA
unique_peak2-34399-1-9--2.94898510510411-2.31132995230379	chr14	4182427	4182985	+	0	NA	Intergenic	Lx|LINE|L1	55729	NM_001029930	545007	Mm.360540	NM_001029930	ENSMUSG00000096775	Gm5796	-	predicted gene 5796	protein-coding
common_peak1-18693-20-25--0.212364933549899-0.342639663781856	chr8	120537948	120538881	+	0	NA	Intergenic	Intergenic	-212585	NM_026758	68533	Mm.181836	NM_026758	ENSMUSG00000031843	Mphosph6	1110001M01Rik|AA536809|C86426	M phase phosphoprotein 6	protein-coding
unique_peak2-34178-2-5--1.50241675698448-1.08602067057793	chr13	34083918	34084291	+	0	NA	intron (NM_001243192, intron 2 of 7)	intron (NM_001243192, intron 2 of 7)	10559	NM_001243192	20719	Mm.252210	NM_009254	ENSMUSG00000060147	Serpinb6a	4930482L21Rik|D330015H01Rik|PI-6|Serpinb6|Spi3|ovalbumin	serine (or cysteine) peptidase inhibitor, clade B, member 6a	protein-coding
common_peak2-30128-32-37-0.0311645057760748-0.312460117298692	chr6	137648495	137649337	+	0	NA	Intergenic	Intergenic	-34687	NM_011499	20901	Mm.22584	NM_011499	ENSMUSG00000030224	Strap	AW557906|C78091|C79202|Unrip	serine/threonine kinase receptor associated protein	protein-coding
common_peak2-24172-11-4-1.18676548936425-1.68134727924692	chr16	45893122	45893507	+	0	NA	Intergenic	Intergenic	-48823	NM_001252442	208177	Mm.211477	NM_153412	ENSMUSG00000033149	Phldb2	AV253284|C820004H04Rik|LL5b|LL5beta	pleckstrin homology-like domain, family B, member 2	protein-coding
common_peak1-10651-11-9-0.186765489364251-0.344532117358383	chr14	47370675	47371343	+	0	NA	Intergenic	L1Md_T|LINE|L1	-9207	NM_028222	72391	Mm.272394	NM_028222	ENSMUSG00000037628	Cdkn3	2410006H10Rik|KAP	cyclin-dependent kinase inhibitor 3	protein-coding
common_peak2-25650-7-8--0.370834171144123-1.00793137938329	chr19	10101433	10101816	+	0	NA	intron (NM_144538, intron 2 of 9)	intron (NM_144538, intron 2 of 9)	8906	NM_144538	74760	Mm.281969	NM_144538	ENSMUSG00000024663	Rab3il1	1200014K04Rik|AI115013|C76746|Rab3ail1	RAB3A interacting protein (rabin3)-like 1	protein-coding
unique_peak2-38563-2-7--1.91745425626332-1.45399745587252	chr7	64905838	64906268	+	0	NA	intron (NM_008071, intron 3 of 8)	intron (NM_008071, intron 3 of 8)	59510	NM_008071	14402	Mm.8004	NM_008071	ENSMUSG00000033676	Gabrb3	A230092K12Rik|AW049585|Cp1|Gabrb-3|beta3	gamma-aminobutyric acid (GABA) A receptor, subunit beta 3	protein-coding
unique_peak1-611-13-5-1.19350952991661-1.95509489018123	chr10	22203177	22203721	+	0	NA	Intergenic	Intergenic	80830	NR_028580	100038752	Mm.392859	NR_028580	ENSMUSG00000096937	Gm10825	ENSMUSG00000075295	predicted gene 10825	ncRNA
common_peak1-11346-16-10-0.658832023630764-0.699649909729472	chr15	88853148	88853876	+	0	NA	intron (NM_031260, intron 19 of 26)	RSINE1|SINE|B4	-36644	NM_001002005	406218	Mm.483059	NM_001002005	ENSMUSG00000058441	Panx2	-	pannexin 2	protein-coding
unique_peak1-4325-7-3-0.799090830298189-1.23214870625617	chr2	151580706	151581221	+	0	NA	Intergenic	Intergenic	-13934	NM_212446	228769	Mm.146984	NM_144889	ENSMUSG00000032869	Psmf1	AW048666|BC012260|PI31	proteasome (prosome, macropain) inhibitor subunit 1	protein-coding
unique_peak1-3873-9-0-3.18961340640422-3.01029995663981	chr2	11545058	11545688	+	0	NA	Intergenic	Intergenic	-19046	NM_008367	16184	Mm.915	NM_008367	ENSMUSG00000026770	Il2ra	CD25|Il2r|Ly-43	interleukin 2 receptor, alpha chain	protein-coding
unique_peak1-302-8-2-1.42025991722641-1.65811743852845	chr1	127234614	127235080	+	0	NA	Intergenic	Intergenic	97457	NM_023735	74117	Mm.183102	NM_023735	ENSMUSG00000026341	Actr3	1200003A09Rik|Arp3	ARP3 actin-related protein 3	protein-coding
common_peak2-19778-12-8-0.478850983645327-0.562038191119709	chr1	82830729	82831165	+	0	NA	Intergenic	MTEa|LTR|MaLR	-5111	NM_010472	15463	Mm.392569	NM_010472	ENSMUSG00000026159	Agfg1	AU045498|C130049H11Rik|C85612|D730048C23Rik|Hrb|RAB|Rip	ArfGAP with FG repeats 1	protein-coding
unique_peak2-38234-4-9--1.34538860874061-1.36011389749466	chr6	118065998	118066349	+	0	NA	intron (NM_030165, intron 6 of 7)	intron (NM_030165, intron 6 of 7)	22985	NM_030165	78752	Mm.300317	NM_030165	ENSMUSG00000042042	Csgalnact2	4632415D10Rik|Galnact2	chondroitin sulfate N-acetylgalactosaminyltransferase 2	protein-coding
unique_peak2-32861-7-18--1.4488366831454-1.38887104242188	chr10	110919639	110920272	+	0	NA	intron (NM_015781, intron 2 of 15)	intron (NM_015781, intron 2 of 15)	2282	NM_001146707	53605	Mm.290407	NM_015781	ENSMUSG00000058799	Nap1l1	AA407126|AI256722|D10Ertd68e|NAP-1	nucleosome assembly protein 1-like 1	protein-coding
common_peak2-23212-9-5-0.604650905683064-1.21398586181642	chr15	3250623	3251051	+	0	NA	intron (NM_001166063, intron 2 of 8)	B3|SINE|B2	2689	NM_001166063	100039139	Mm.455610	NM_001166063	ENSMUSG00000091119	Ccdc152	ENSMUSG00000071814	coiled-coil domain containing 152	protein-coding
common_peak1-13387-103-123-0.333801435473165-1.15059212292305	chr19	46960953	46962859	+	0	NA	non-coding (NR_028353, exon 19 of 19)	non-coding (NR_028353, exon 19 of 19)	74935	NM_029810	76952	Mm.40965	NM_029810	ENSMUSG00000025041	Nt5c2	2010002I23Rik|CnII|ENSMUSG00000025039|Gm9751|Gmp|Nt5b|Pnt5|cN-II	5'-nucleotidase, cytosolic II	protein-coding
common_peak2-30351-5-8--0.874305337448166-1.10484139239135	chr7	27489832	27490206	+	0	NA	Intergenic	Lx4A|LINE|L1	-18570	NM_001081148	243881	Mm.294678	NM_001081148	ENSMUSG00000040650	Cyp2b23	EG243881	cytochrome P450, family 2, subfamily b, polypeptide 23	protein-coding
common_peak2-20679-21-34--0.559793751678731-0.677299098039755	chr10	86778053	86779027	+	0	NA	Intergenic	MYSERV16_I-int|LTR|ERVK	177865	NM_008553	17172	Mm.136217	NM_008553	ENSMUSG00000020052	Ascl1	AI225900|ASH1|Mash1|bHLHa46	achaete-scute complex homolog 1 (Drosophila)	protein-coding
common_peak2-27291-9-13--0.617741515653384-0.459837087125828	chr3	58636418	58636957	+	0	NA	Intergenic	Intergenic	52447	NM_153386	229320	Mm.131502	NM_153384	ENSMUSG00000043850	Clrn1	A130002D11Rik|USH3|Ush3a	clarin 1	protein-coding
common_peak2-22169-13-15--0.221527969362231-0.308519316180257	chr12	98282498	98283359	+	0	NA	Intergenic	Intergenic	-997496	NR_103800	69423	Mm.46121	NM_027076	ENSMUSG00000059695	1700019M22Rik	-	NFX-like protein	pseudo
common_peak2-23421-62-53-0.655863956638616-1.92708524847946	chr15	61532178	61533639	+	0	NA	intron (NR_040350, intron 4 of 4)	intron (NR_040350, intron 4 of 4)	73098	NR_040350	432956	Mm.404918	NR_040350		D030024E09Rik	-	RIKEN cDNA D030024E09 gene	ncRNA
unique_peak1-3652-23-8-1.55184250306677-2.47979361197949	chr19	38629437	38630311	+	0	NA	intron (NM_019588, intron 1 of 31)	intron (NM_019588, intron 1 of 31)	31187	NM_019588	74055	Mm.34031	NM_019588	ENSMUSG00000024998	Plce1	4933403A21Rik|PLCepsilon|Plce|mKIAA1516	phospholipase C, epsilon 1	protein-coding
unique_peak1-7165-9-4-0.867685311516858-1.36011389749466	chr9	59290699	59291255	+	0	NA	intron (NM_019927, intron 2 of 13)	intron (NM_019927, intron 2 of 13)	38571	NR_045640	100504377	Mm.446631	NR_045640		Gm20199	-	predicted gene, 20199	ncRNA
common_peak2-27078-23-52--1.00615295005412-2.21947156384788	chr3	37419894	37421090	+	0	NA	intron (NM_001163511, intron 14 of 15)	intron (NM_001163511, intron 14 of 15)	101290	NM_021343	57815	Mm.172679	NM_021343	ENSMUSG00000027722	Spata5	2510048F20Rik|C78064|Spaf	spermatogenesis associated 5	protein-coding
common_peak2-19961-16-35--1.05166135917425-1.68242911687175	chr1	133024824	133025574	+	0	NA	3' UTR (NM_145508, exon 3 of 3)	3' UTR (NM_145508, exon 3 of 3)	9612	NM_145508	226419	Mm.39299	NM_145508	ENSMUSG00000016526	Dyrk3	BC006704	dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3	protein-coding
unique_peak2-38081-0-7--3.84013093047421-1.80617997398389	chr6	52473551	52473975	+	0	NA	Intergenic	Intergenic	31318	NR_046049	74304	Mm.490579	NR_046049		1700094M24Rik	-	RIKEN cDNA 1700094M24 gene	ncRNA
common_peak2-19963-31-18-0.977311157369538-1.75610071733784	chr1	133046067	133046781	+	0	NA	Intergenic	RMER17C|LTR|ERVK	-3360	NM_001136070	16865	Mm.276294	NM_010709	ENSMUSG00000026427	Eif2d	D1Ertd5e|Lgtn	eukaryotic translation initiation factor 2D	protein-coding
unique_peak2-35567-1-8--2.79698201165906-2.05605744720049	chr17	67149804	67150174	+	0	NA	intron (NM_008984, intron 17 of 30)	intron (NM_008984, intron 17 of 30)	-206027	NM_028998	74556	Mm.218634	NM_028998	ENSMUSG00000024105	Themis3	9130404H23Rik	thymocyte selection associated family member 3	protein-coding
common_peak2-24782-68-111--0.237394142759308-0.57115485415796	chr17	63498723	63500757	+	0	NA	intron (NM_015794, intron 7 of 8)	intron (NM_015794, intron 7 of 8)	-269074	NM_010109	13640	Mm.7978	NM_010109		Efna5	AL-1|AV158822|EFL-5|Ephrin-A5|Epl7|LERK-7|RAGS	ephrin A5	protein-coding
unique_peak1-4832-7-1-1.79909083029819-1.80617997398389	chr3	146655177	146655659	+	0	NA	Intergenic	Intergenic	140087	NM_027594	70892	Mm.187793	NM_027594	ENSMUSG00000036745	Ttll7	1110049N09Rik|4921517B04Rik|C630030B20|Ttll7s	tubulin tyrosine ligase-like family, member 7	protein-coding
common_peak2-23999-11-6-0.701338662194009-1.32595962126035	chr16	20476782	20477163	+	0	NA	Intergenic	Intergenic	-21918	NM_172265	224045	Mm.233855	NM_172265	ENSMUSG00000003235	Eif2b5	C81315	eukaryotic translation initiation factor 2B, subunit 5 epsilon	protein-coding
unique_peak2-34940-5-6--0.511735258063458-0.947717972411649	chr15	89122822	89123189	+	0	NA	intron (NM_001170561, intron 36 of 40)	intron (NM_001170561, intron 36 of 40)	13158	NR_105924	102465981		NR_105924		Mir6959	mmu-mir-6959	microRNA mir-6959	ncRNA
common_peak1-8358-21-55--1.23786565679137-3.0148771644356	chr10	59221023	59221817	+	0	NA	intron (NM_001291443, intron 6 of 12)	intron (NM_001291443, intron 6 of 12)	56109	NM_001291443	216001	Mm.27199	NM_144822	ENSMUSG00000020111	Micu1	C730016L05Rik|Calc|Cbara1	mitochondrial calcium uptake 1	protein-coding
common_peak2-28453-12-10-0.189344366450341-0.386243247519795	chr4	150808955	150809472	+	0	NA	intron (NM_001081557, intron 5 of 23)	intron (NM_001081557, intron 5 of 23)	-377151	NM_009498	22319	Mm.273930	NM_009498	ENSMUSG00000028955	Vamp3	D130027G05Rik|VAMP-3|ceb	vesicle-associated membrane protein 3	protein-coding
unique_peak2-37548-1-10--3.08648862885404-2.57096726280955	chr5	31254111	31254772	+	0	NA	3' UTR (NM_001294302, exon 8 of 8)	3' UTR (NM_001294302, exon 8 of 8)	1962	NM_021304	57742	Mm.389615	NM_021304	ENSMUSG00000006638	Abhd1	LABH-1|LABH1	abhydrolase domain containing 1	protein-coding
common_peak2-25214-12-7-0.648775985087639-0.697979855752659	chr18	60962977	60963468	+	0	NA	promoter-TSS (NM_001042605)	promoter-TSS (NM_001042605)	-281	NM_001042605	16149	Mm.439737	NM_010545	ENSMUSG00000024610	Cd74	CLIP|DHLAG|HLADG|Ia-GAMMA|Ii	CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)	protein-coding
unique_peak1-1851-10-6-0.549060422951165-1.21398586181642	chr14	50784775	50785393	+	0	NA	Intergenic	MT2B|LTR|ERVL	-16537	NM_146278	258275	Mm.377408	NM_146278	ENSMUSG00000049011	Olfr729	MOR246-6	olfactory receptor 729	protein-coding
common_peak1-12604-35-60--0.499367079100383-0.913104017362139	chr18	25629668	25630868	+	0	NA	Intergenic	MIR|SINE|MIR	282216	NM_133195	108013	Mm.266435	NM_133195	ENSMUSG00000024268	Celf4	A230070D14Rik|BRUNOL-4|Brul4|Brunol4|C130060B05Rik	CUGBP, Elav-like family member 4	protein-coding
common_peak2-20482-6-11--1.01956439034085-1.32595962126035	chr10	47454182	47454644	+	0	NA	Intergenic	Intergenic	1361236	NR_046212	100418235	Mm.185993	NR_046212		C130030K03Rik	-	proteasome (prosome, macropain) subunit, alpha type 6 pseudogene	pseudo
unique_peak1-1895-9-3-1.18961340640422-1.57096726280955	chr14	65375281	65375806	+	0	NA	intron (NM_001081177, intron 21 of 39)	intron (NM_001081177, intron 21 of 39)	104175	NM_001081177	16554	Mm.23611	NM_001081177	ENSMUSG00000060012	Kif13b	5330429L19Rik|6030414C01|AI429803|C130021D12Rik|GAKIN	kinesin family member 13B	protein-coding
unique_peak2-32599-1-8--2.79698201165906-2.05605744720049	chr1	91298280	91298752	+	0	NA	intron (NR_040482, intron 1 of 2)	ORR1E|LTR|MaLR	4192	NR_040482	77331	Mm.374962	NR_040482		C030007H22Rik	-	RIKEN cDNA C030007H22 gene	ncRNA
common_peak2-25830-45-53-0.105470523181403-0.349953584539098	chr19	38836488	38837654	+	0	NA	intron (NM_019588, intron 23 of 31)	intron (NM_019588, intron 23 of 31)	56656	NM_021315	57753	Mm.86482	NM_021315	ENSMUSG00000024999	Noc3l	AF233884|Fad24	nucleolar complex associated 3 homolog (S. cerevisiae)	protein-coding
common_peak2-31197-9-7-0.18961340640422-1.05908390183068	chr8	60954256	60954568	+	0	NA	intron (NM_175032, intron 2 of 11)	AT_rich|Low_complexity|Low_complexity	225181	NM_001177534	100271928	Mm.484123	NM_001177534		Gm15881	OTTMUSG00000027193	predicted gene 15881	protein-coding
unique_peak1-207-8-0-3.00522241794757-2.70926996097583	chr1	86352209	86352715	+	0	NA	Intergenic	Intergenic	-1085321	NM_001037909	620078	Mm.386456	NM_175219	ENSMUSG00000052477	C130026I21Rik	4930565N07Rik|OTTMUSG00000029174	RIKEN cDNA C130026I21 gene	protein-coding
common_peak2-27912-7-6--0.00826409175941478-0.97990265578305	chr4	7942044	7942445	+	0	NA	Intergenic	L1_Mur3|LINE|L1	223944	NM_007592	12319	Mm.119320	NM_007592		Car8	AW546993|Ca8|Cals|Cals1|Carp|wdl	carbonic anhydrase 8	protein-coding
common_peak1-16934-6-7--0.434601889619698-0.97990265578305	chr6	83121831	83122320	+	0	NA	intron (NM_001198866, intron 1 of 31)	intron (NM_001198866, intron 1 of 31)	6157	NM_001198867	13191	Mm.6919	NM_007835	ENSMUSG00000031865	Dctn1	AL022633|Glued|p150|p150<glued>	dynactin 1	protein-coding
common_peak1-10510-14-10-0.439784541720347-0.519648556297791	chr14	122912694	122913400	+	0	NA	Intergenic	Intergenic	-20503	NM_144844	110821	Mm.23876	NM_144844	ENSMUSG00000041650	Pcca	C79630	propionyl-Coenzyme A carboxylase, alpha polypeptide	protein-coding
common_peak1-12793-37-41-0.133675648707058-0.363463023472118	chr18	64515828	64517110	+	0	NA	intron (NM_194268, intron 1 of 1)	intron (NM_194268, intron 1 of 1)	16451	NM_194268	225631	Mm.234723	NM_194268	ENSMUSG00000045991	Onecut2	C730009D12|OC-2|Oc2	one cut domain, family member 2	protein-coding
common_peak1-16428-28-51--0.647480598319629-1.1451285992054	chr5	134176007	134176897	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-399166	NM_030719	80909	Mm.45218	NM_030719		Gatsl2	7530428J21Rik|AW742413|Gats|Gatsl1	GATS protein-like 2	protein-coding
unique_peak1-526-12-6-0.841421063030034-1.58711810488664	chr1	184861911	184862544	+	0	NA	Intergenic	L1VL2|LINE|L1	-22692	NM_016928	53791	Mm.116894	NM_016928	ENSMUSG00000079164	Tlr5	-	toll-like receptor 5	protein-coding
common_peak2-27968-47-71--0.235083576675764-0.465693198848464	chr4	41348639	41349914	+	0	NA	intron (NM_024241, intron 8 of 12)	intron (NM_024241, intron 8 of 12)	53247	NM_023305	67123	Mm.289795	NM_023305	ENSMUSG00000028437	Ubap1	2700092A01Rik|NAG20|UBAP-1|Ubap	ubiquitin-associated protein 1	protein-coding
unique_peak1-5283-10-3-1.35641534500877-1.75805390616669	chr5	66098475	66099121	+	0	NA	Intergenic	Intergenic	-9703	NM_001081321	71521	Mm.278974	NM_027818	ENSMUSG00000029202	Pds5a	9030416H16Rik|E230024D05Rik|mKIAA0648	PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	protein-coding
common_peak2-30463-28-46--0.501629731856175-0.767679714496325	chr7	45813716	45814297	+	0	NA	Intergenic	Intergenic	705898	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak1-7162-12-3-1.64877598508764-2.36932189928148	chr9	58455674	58456482	+	0	NA	intron (NM_001293673, intron 1 of 7)	(TTCC)n|Simple_repeat|Simple_repeat	26031	NM_009145	20320	Mm.15125	NM_009145	ENSMUSG00000032336	Nptn	AW554172|SDR-1|Sdfr1	neuroplastin	protein-coding
unique_peak2-37938-3-5--0.998945590680433-0.96108193396963	chr5	147299874	147300288	+	0	NA	Intergenic	Intergenic	-2858	NM_001243110	622924	Mm.389722	NM_001243110	ENSMUSG00000096527	Gm6370	-	predicted gene 6370	protein-coding
common_peak1-17979-35-38-0.145968039600255-0.368093376636814	chr7	133636753	133637721	+	0	NA	intron (NM_183020, intron 19 of 22)	intron (NM_183020, intron 19 of 22)	6368	NM_001163713	233870	Mm.197829	NM_172745	ENSMUSG00000073838	Tufm	2300002G02Rik|C76308|C76389|EF-TuMT|EFTU	Tu translation elongation factor, mitochondrial	protein-coding
common_peak1-14939-92-100-0.43414060095097-1.49816780976792	chr3	102755328	102757692	+	0	NA	intron (NM_201622, intron 3 of 10)	intron (NM_201622, intron 3 of 10)	11546	NM_201622	381463	Mm.331269	NM_198658	ENSMUSG00000048938	Nr1h5	Fxrb	nuclear receptor subfamily 1, group H, member 5	protein-coding
unique_peak2-33486-7-8--0.370834171144123-1.00793137938329	chr11	70199161	70199544	+	0	NA	Intergenic	Intergenic	24181	NM_029231	75273	Mm.340601	NM_029231	ENSMUSG00000018921	Pelp1	4930563C04Rik|MNAR	proline, glutamic acid and leucine rich protein 1	protein-coding
common_peak2-27214-29-41--0.28002734216365-0.403996330555226	chr3	41741995	41742600	+	0	NA	Intergenic	Intergenic	195757	NM_027271	73852	Mm.29006	NM_027271	ENSMUSG00000025766	D3Ertd751e	2810009O15Rik|4930415G15Rik	DNA segment, Chr 3, ERATO Doi 751, expressed	protein-coding
unique_peak1-6084-9-2-1.60465090568306-1.87199725847353	chr6	122715109	122715636	+	0	NA	Intergenic	Intergenic	-22609	NM_011401	20527	Mm.395108	NM_011401	ENSMUSG00000003153	Slc2a3	AA408729|AL023014|AL024341|AU040424|C78366|Glut-3|Glut3	solute carrier family 2 (facilitated glucose transporter), member 3	protein-coding
unique_peak1-2087-27-9-1.66961785600787-3.27210358356897	chr15	36923991	36925064	+	0	NA	Intergenic	Intergenic	12630	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
common_peak1-18446-19-20-0.0103699038829257-0.306326795069978	chr8	83441716	83442479	+	0	NA	Intergenic	ORR1C1|LTR|MaLR	-37679	NM_001301298	14388	Mm.277409	NM_021356	ENSMUSG00000031714	Gab1	AA408973|AW107238	growth factor receptor bound protein 2-associated protein 1	protein-coding
unique_peak2-36376-1-5--2.2120195109379-1.32905871926422	chr2	118074133	118074374	+	0	NA	intron (NM_027759, intron 4 of 10)	intron (NM_027759, intron 4 of 10)	8449	NM_027759	71313	Mm.85046	NM_027759	ENSMUSG00000027344	Fsip1	1700012M13Rik|4933432K11Rik	fibrous sheath-interacting protein 1	protein-coding
unique_peak1-3598-47-11-2.34987892404539-8.60768941281657	chr19	32181045	32182662	+	0	NA	Intergenic	Intergenic	-4223	NM_018830	54447	Mm.491229	NM_018830	ENSMUSG00000024887	Asah2	AI585898	N-acylsphingosine amidohydrolase 2	protein-coding
common_peak1-7637-13-20--0.613845392140992-0.532159081577619	chr1	65186537	65187073	+	0	NA	Intergenic	Intergenic	-17017	NM_001285882	98303	Mm.348057	NM_175293	ENSMUSG00000044816	D630023F18Rik	AI314969	RIKEN cDNA D630023F18 gene	protein-coding
common_peak1-10558-10-15--0.643584654991231-0.519648556297791	chr14	20674331	20674753	+	0	NA	Intergenic	Intergenic	16395	NR_105025	52512	Mm.483998	NR_105025		D14Ertd670e	-	DNA segment, Chr 14, ERATO Doi 670, expressed	ncRNA
common_peak1-14259-41-48-0.0864388607334519-0.335782825099843	chr2	155691524	155692577	+	0	NA	intron (NR_024487, intron 7 of 9)	intron (NR_024487, intron 7 of 9)	-31460	NM_027788	71405	Mm.260918	NM_027788		Fam83c	5530400B04Rik	family with sequence similarity 83, member C	protein-coding
common_peak1-9323-13-12-0.0780323124966764-0.334470287753051	chr11	95076817	95077504	+	0	NA	Intergenic	Intergenic	-45683	NM_053093	93670	Mm.40085	NM_053093	ENSMUSG00000020872	Tac4	AW489379|PPT-C	tachykinin 4	protein-coding
common_peak1-11933-95-112-0.327736382608826-1.07224831430528	chr17	83705606	83707352	+	0	NA	Intergenic	Intergenic	-43792	NM_001114361	78798	Mm.295565	NM_199466	ENSMUSG00000032624	Eml4	4930443C24Rik|AI644019	echinoderm microtubule associated protein like 4	protein-coding
unique_peak2-38348-7-13--1.00826409175941-0.697979855752659	chr7	131235540	131236094	+	0	NA	intron (NM_001252072, intron 1 of 1)	L1MD|LINE|L1	109122	NM_001252072	628779	Mm.40210	NM_001252072	ENSMUSG00000078591	Hs3st4	EG628779|Gm6915	heparan sulfate (glucosamine) 3-O-sulfotransferase 4	protein-coding
unique_peak2-32642-13-22--0.745089925419244-0.690311289528838	chr1	130733987	130734760	+	0	NA	Intergenic	Intergenic	-245497	NM_009911	12767	Mm.1401	NM_009911	ENSMUSG00000045382	Cxcr4	CD184|Cmkar4|LESTR|PB-CKR|PBSF/SDF-1|Sdf1r|b2b220Clo	chemokine (C-X-C motif) receptor 4	protein-coding
common_peak2-23323-9-6-0.382258484346616-1.11707584880836	chr15	36920913	36921299	+	0	NA	Intergenic	Intergenic	16051	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
common_peak1-16889-32-39--0.0428360756677026-0.301029995663967	chr6	71633027	71633791	+	0	NA	Intergenic	Intergenic	-24266	NM_178608	52250	Mm.146332	NM_178608	ENSMUSG00000052852	Reep1	D6Ertd253e	receptor accessory protein 1	protein-coding
unique_peak2-35414-3-10--1.87341470859657-1.75805390616669	chr17	33823978	33824473	+	0	NA	non-coding (NR_045523, exon 5 of 6)	non-coding (NR_045523, exon 5 of 6)	-1822	NM_029804	76936	Mm.311439	NM_029804	ENSMUSG00000059208	Hnrnpm	2610023M21Rik|AA409009|Hnrpm|mKIAA4193	heterogeneous nuclear ribonucleoprotein M	protein-coding
common_peak2-29626-61-63-0.38274932974934-0.897828700867235	chr6	55037255	55038952	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	29804	NM_001288619	12922	Mm.236081	NM_009953	ENSMUSG00000003476	Crhr2	CRF-R2|CRFR2alpha|CRFR2beta|Crfr2	corticotropin releasing hormone receptor 2	protein-coding
unique_peak1-4416-39-6-2.80840632486155-8.62624725869856	chr2	167760937	167762267	+	0	NA	intron (NM_011201, intron 1 of 8)	intron (NM_011201, intron 1 of 8)	3775	NM_011201	19246	Mm.277916	NM_011201	ENSMUSG00000027540	Ptpn1	PTP-1B|PTP-HA2|PTP1B	protein tyrosine phosphatase, non-receptor type 1	protein-coding
common_peak2-20368-9-6-0.382258484346616-1.11707584880836	chr10	13501028	13501428	+	0	NA	intron (NM_025446, intron 3 of 5)	intron (NM_025446, intron 3 of 5)	87408	NM_025446	66253	Mm.45755	NM_025446	ENSMUSG00000019806	Aig1	1500031O19Rik|AV064870|AW413422|CGI-103	androgen-induced 1	protein-coding
unique_peak1-3458-10-1-2.35641534500877-2.57096726280955	chr19	9090458	9090959	+	0	NA	exon (NM_009643, exon 5 of 5)	exon (NM_009643, exon 5 of 5)	26934	NM_001286518	66395	Mm.203866	NM_009643	ENSMUSG00000069833	Ahnak	DY6	AHNAK nucleoprotein (desmoyokin)	protein-coding
common_peak1-15532-10-17--0.813509656433543-0.699649909729472	chr4	118437497	118438161	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-10688	NM_207152	258259	Mm.377398	NM_207152	ENSMUSG00000095218	Olfr1338	MOR259-4P|MOR259-9|Olfr1524-ps1	olfactory receptor 1338	protein-coding
common_peak1-14498-12-19--0.673152109799724-0.546772548767014	chr3	14578603	14579186	+	0	NA	exon (NM_007892, exon 1 of 8)	exon (NM_007892, exon 1 of 8)	223	NM_007892	13559	Mm.153415	NM_007892	ENSMUSG00000027552	E2f5	AU024671|E2F-5	E2F transcription factor 5	protein-coding
unique_peak1-483-9-6-0.382258484346616-1.11707584880836	chr1	177624743	177625449	+	0	NA	Intergenic	Intergenic	-2333	NM_010098	13603	Mm.32744	NM_010098	ENSMUSG00000026525	Opn3	ERO|Ecpn	opsin 3	protein-coding
unique_peak1-1523-8-0-3.00522241794757-2.70926996097583	chr13	12693467	12694052	+	0	NA	intron (NM_026184, intron 12 of 15)	Lx3C|LINE|L1	35609	NM_026184	67475	Mm.358706	NM_026184	ENSMUSG00000057069	Ero1lb	1300013B24Rik|1700065B09Rik|AI447560|ero1-beta	ERO1-like beta (S. cerevisiae)	protein-coding
common_peak1-7626-17-42--1.20796841649706-2.23152841032562	chr1	64120490	64121415	+	0	NA	intron (NM_033563, intron 2 of 3)	intron (NM_033563, intron 2 of 3)	-31877	NR_105864	102466760		NR_105864		Mir6899	mmu-mir-6899	microRNA mir-6899	ncRNA
unique_peak2-37280-9-14--0.717277189204299-0.53895475198017	chr4	116721024	116721668	+	0	NA	intron (NM_175135, intron 4 of 9)	intron (NM_175135, intron 4 of 9)	29333	NM_001111277	108067	Mm.34612	NM_175135	ENSMUSG00000028683	Eif2b3	1190002P15Rik	eukaryotic translation initiation factor 2B, subunit 3	protein-coding
common_peak1-7737-30-11-1.58471290877072-3.34305003325519	chr1	89109523	89111128	+	0	NA	promoter-TSS (NM_023314)	promoter-TSS (NM_023314)	-164	NM_023314	26987	Mm.227183	NM_023314	ENSMUSG00000026254	Eif4e2	2700069E09Rik|AI036339|AV129531|D0H0S6743E|Eif4el3	eukaryotic translation initiation factor 4E member 2	protein-coding
unique_peak1-4247-31-12-1.52479895267203-3.2055306048522	chr2	127444073	127445249	+	0	NA	Intergenic	L1M3|LINE|L1	31499	NM_029963	77721	Mm.274601	NM_029963		Mrps5	1620401I16Rik|AI850294	mitochondrial ribosomal protein S5	protein-coding
common_peak2-23376-44-44-0.33003973823886-0.665385344403438	chr15	55556718	55558036	+	0	NA	intron (NM_016667, intron 3 of 6)	intron (NM_016667, intron 3 of 6)	168414	NM_001168250	105837	Mm.390829	NM_134092	ENSMUSG00000022369	Mtbp	AI429604|MDM2BP	Mdm2, transformed 3T3 cell double minute p53 binding protein	protein-coding
common_peak1-14432-42-50-0.0699039858956887-0.334445504886124	chr2	180920108	180921087	+	0	NA	Intergenic	Lx6|LINE|L1	-1451	NM_025598	66496	Mm.213943	NM_025598	ENSMUSG00000016344	Ppdpf	0610012G23Rik|2610317A05Rik|2700038C09Rik|3110053G12Rik	pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	protein-coding
common_peak2-30538-35-53--0.323517243700964-0.527635886371667	chr7	68022041	68022992	+	0	NA	Intergenic	Lx9|LINE|L1	-737411	NM_001082962	20646	Mm.274995	NM_013670	ENSMUSG00000000948	Snrpn	2410045I01Rik|HCERN3|Peg4|Pwcr1|SMN	small nuclear ribonucleoprotein N	protein-coding
unique_peak2-32842-5-7--0.704380336005853-1.01466476204226	chr1	193418373	193418795	+	0	NA	intron (NM_178632, intron 5 of 19)	intron (NM_178632, intron 5 of 19)	18971	NM_178632	77065	Mm.338175	NM_178632	ENSMUSG00000037461	Ints7	5930412E23Rik	integrator complex subunit 7	protein-coding
unique_peak2-32654-6-5--0.0195643903408542-0.947717972411649	chr1	133247715	133248129	+	0	NA	intron (NM_001081011, intron 7 of 22)	Charlie15a|DNA|MER1_type	-71782	NM_019777	56489	Mm.386783	NM_019777	ENSMUSG00000042349	Ikbke	AW558201|IKK-i|IKKepsilon|Ikki	inhibitor of kappaB kinase epsilon	protein-coding
unique_peak1-4367-10-6-0.549060422951165-1.21398586181642	chr2	156992062	156992667	+	0	NA	intron (NM_011249, intron 16 of 21)	B4|SINE|B4	-31406	NM_018851	56045	Mm.248478	NM_018851	ENSMUSG00000027639	Samhd1	E330031J07Rik|Mg11	SAM domain and HD domain, 1	protein-coding
common_peak1-11749-41-67--0.386314136401679-0.712696723931505	chr16	36071607	36072518	+	0	NA	promoter-TSS (NM_027342)	promoter-TSS (NM_027342)	316	NM_001159421	381045	Mm.310434	NM_198645	ENSMUSG00000075229	Ccdc58	A930007B11Rik|AI413631	coiled-coil domain containing 58	protein-coding
unique_peak2-34302-1-8--2.79698201165906-2.05605744720049	chr13	81683877	81684249	+	0	NA	intron (NM_054053, intron 21 of 89)	intron (NM_054053, intron 21 of 89)	88080	NM_054053	110789	Mm.288694	NM_054053	ENSMUSG00000069170	Gpr98	Frings|Mass1|Mgr1|VLGR1	G protein-coupled receptor 98	protein-coding
common_peak1-17118-42-25-1.04188960972609-2.66762268841486	chr6	115271708	115273263	+	0	NA	Intergenic	Intergenic	-38754	NM_001127330	19016	Mm.3020	NM_011146	ENSMUSG00000000440	Pparg	Nr1c3|PPAR-gamma|PPAR-gamma2|PPARgamma|PPARgamma2	peroxisome proliferator activated receptor gamma	protein-coding
common_peak2-27796-23-57--1.13621349061849-2.87721178913356	chr3	138741724	138743185	+	0	NA	Intergenic	Intergenic	-4289	NM_001040690	229877	Mm.28893	NM_145544	ENSMUSG00000028149	Rap1gds1	BC011279|GDS1	RAP1, GTP-GDP dissociation stimulator 1	protein-coding
common_peak2-22540-9-13--0.617741515653384-0.459837087125828	chr13	56581865	56582547	+	0	NA	intron (NM_008373, intron 3 of 4)	intron (NM_008373, intron 3 of 4)	1401	NM_008373	16198	Mm.3006	NM_008373	ENSMUSG00000021538	Il9	Il-9|P40	interleukin 9	protein-coding
common_peak1-13704-16-42--1.30800111243404-2.67563291309485	chr2	30470092	30470863	+	0	NA	Intergenic	Intergenic	19913	NM_030137	78617	Mm.40413	NM_030137	ENSMUSG00000047363	Cstad	9530039B02Rik	CSA-conditional, T cell activation-dependent protein	protein-coding
unique_peak2-34604-2-7--1.91745425626332-1.45399745587252	chr14	72869644	72870073	+	0	NA	Intergenic	Intergenic	239952	NM_207636	319448	Mm.205421	NM_207636	ENSMUSG00000033487	Fndc3a	1700094E19Rik|D14Ertd453e|F730017H24Rik|Fndc3|sys	fibronectin type III domain containing 3A	protein-coding
common_peak1-8920-11-20--0.883623838527147-0.876666802405043	chr11	51763367	51764135	+	0	NA	Intergenic	B3|SINE|B2	-17382	NM_029976	52626	Mm.289456	NM_029976	ENSMUSG00000020392	Cdkn2aipnl	A430101B06Rik|AA409260|D11Ertd497e|MNCb-1520	CDKN2A interacting protein N-terminal like	protein-coding
unique_peak2-37492-2-7--1.91745425626332-1.45399745587252	chr5	5663741	5664204	+	0	NA	TTS (NM_001103157)	TTS (NM_001103157)	260	NM_172447	207686	Mm.319007	NM_172447		Cfap69	4921525K03|A330021E22Rik|AI427898	cilia and flagella associated protein 69	protein-coding
common_peak1-10220-15-16--0.075298090694683-0.301029995663976	chr13	49682231	49682942	+	0	NA	intron (NM_012050, intron 1 of 3)	intron (NM_012050, intron 1 of 3)	4470	NM_012050	27047	Mm.390589	NM_012050	ENSMUSG00000048368	Omd	OSAD|SLRR2C	osteomodulin	protein-coding
common_peak1-10323-37-29-0.6191024758773-1.14508711250721	chr13	72639056	72640233	+	0	NA	Intergenic	Intergenic	126368	NR_030701	328287	Mm.235072	NR_030701		Gm20554	D430050G20	predicted gene, 20554	ncRNA
common_peak1-11137-8-6-0.197867495889966-1.03789460276074	chr15	72652624	72653165	+	0	NA	intron (NM_001164641, intron 17 of 17)	L1_Mur2|LINE|L1	-12140	NR_002864	353342	Mm.440245	NR_002864		Peg13	-	paternally expressed 13	ncRNA
common_peak2-27753-13-35--1.39145297080454-2.32006591355687	chr3	127836926	127837625	+	0	NA	intron (NR_045704, intron 3 of 5)	intron (NR_045704, intron 3 of 5)	97248	NR_045704	402774	Mm.209170	NR_045704		D030025E07Rik	-	RIKEN cDNA D030025E07 gene	ncRNA
unique_peak2-39406-3-10--1.87341470859657-1.75805390616669	chr9	34488957	34489401	+	0	NA	intron (NM_001190912, intron 1 of 15)	intron (NM_001190912, intron 1 of 15)	192863	NM_001190911	67703	Mm.220710	NM_026324		Kirrel3	1500010O20Rik|2900036G11Rik|NEPH2|SST4|mKIAA1867	kin of IRRE like 3 (Drosophila)	protein-coding
unique_peak2-34889-6-7--0.434601889619698-0.97990265578305	chr15	80156827	80157317	+	0	NA	intron (NM_001044308, intron 4 of 36)	intron (NM_001044308, intron 4 of 36)	39404	NM_001044308	239556	Mm.291058	NM_001044308	ENSMUSG00000022416	Cacna1i	Ca(V)3.3	calcium channel, voltage-dependent, alpha 1I subunit	protein-coding
unique_peak1-732-7-2-1.21412832957703-1.45399745587252	chr10	96822155	96822692	+	0	NA	Intergenic	Intergenic	-63689	NR_039547	100628616		NR_039547		Mir3966	mmu-mir-3966|mu-mir-3966	microRNA 3966	ncRNA
unique_peak1-5474-8-0-3.00522241794757-2.70926996097583	chr5	126540474	126540953	+	0	NA	Intergenic	Lx8|LINE|L1	527925	NM_001190352	208151	Mm.40397	NM_001190352	ENSMUSG00000070498	Tmem132b	AK220418|mKIAA1786	transmembrane protein 132B	protein-coding
common_peak2-31977-17-15-0.218296338205038-0.403453972741633	chr9	69443403	69444074	+	0	NA	Intergenic	Intergenic	138987	NR_037296	100526560		NR_037296	miRBase:MI0014106	Mir3109	mmu-mir-3109	microRNA 3109	ncRNA
common_peak2-31073-18-7-1.31291915122835-1.71830443967823	chr8	23058285	23058851	+	0	NA	intron (NM_139223, intron 1 of 1)	intron (NM_139223, intron 1 of 1)	1334	NM_139223	246083	Mm.219548	NM_139223		Defb13	BD-13	defensin beta 13	protein-coding
common_peak2-22708-20-14-0.581184188982674-0.690311289528838	chr13	101539811	101540580	+	0	NA	intron (NM_021886, intron 4 of 8)	intron (NM_021886, intron 4 of 8)	5659	NM_021886	26886	Mm.273502	NM_021886	ENSMUSG00000045273	Cenph	1700021I11Rik|2410018A12Rik|2610042E16Rik|2810046K12Rik|AU044255|CENP-H|ENP	centromere protein H	protein-coding
unique_peak1-4399-13-8-0.608547029195456-0.660903317613904	chr2	165882046	165882697	+	0	NA	intron (NM_008679, intron 12 of 22)	BC1_Mm|scRNA|scRNA	64234	NM_008679	17979	Mm.469663	NM_008679	ENSMUSG00000027678	Ncoa3	2010305B15Rik|AW321064|Actr|Aib1|KAT13B|Rac3|Src3|Tram-1|Tram1|bHLHe42|p/Cip|pCip	nuclear receptor coactivator 3	protein-coding
unique_peak2-38323-5-5--0.289342836727009-0.909929411522249	chr6	146959687	146960094	+	0	NA	intron (NM_001170433, intron 15 of 27)	intron (NM_001170433, intron 15 of 27)	-21169	NM_025620	66532	Mm.45888	NM_025620	ENSMUSG00000040121	Rep15	2210417D09Rik	RAB15 effector protein	protein-coding
common_peak2-27847-19-18-0.154759813218101-0.351190433797598	chr3	152339948	152340548	+	0	NA	intron (NR_040386, intron 2 of 3)	B3A|SINE|B2	-9144	NM_001081277	229949	Mm.207057	NM_001081277	ENSMUSG00000039058	Ak5	-	adenylate kinase 5	protein-coding
common_peak2-27447-17-10-0.75886471956774-0.917676348953458	chr3	90082651	90083219	+	0	NA	intron (NM_201407, intron 24 of 27)	B1_Mur1|SINE|Alu	8864	NR_105979	102465612		NR_105979		Mir7012	mmu-mir-7012	microRNA mir-7012	ncRNA
common_peak2-20114-5-5--0.289342836727009-0.909929411522249	chr1	162039204	162039637	+	0	NA	intron (NM_177839, intron 15 of 21)	GA-rich|Low_complexity|Low_complexity	-31304	NR_038031	75255	Mm.414845	NR_038030	ENSMUSG00000026729	4930562F07Rik	-	RIKEN cDNA 4930562F07 gene	ncRNA
common_peak1-9166-10-13--0.450939577048835-0.386243247519795	chr11	78163941	78164456	+	0	NA	Intergenic	B4A|SINE|B4	7174	NM_011676	22248	Mm.284811	NM_011676	ENSMUSG00000002058	Unc119	D11Bhm52|HRG4|MRG4|Rg4|Rtg4|Unc119h	unc-119 homolog (C. elegans)	protein-coding
common_peak1-12492-44-29-0.915002238960017-2.3171515282213	chr17	87202279	87203971	+	0	NA	intron (NM_010137, intron 2 of 15)	intron (NM_010137, intron 2 of 15)	49921	NM_010137	13819	Mm.1415	NM_010137	ENSMUSG00000024140	Epas1	HIF-2alpha|HIF2A|HLF|HRF|MOP2|bHLHe73	endothelial PAS domain protein 1	protein-coding
common_peak2-24093-17-19--0.103631756682325-0.301029995663974	chr16	31947886	31948665	+	0	NA	promoter-TSS (NM_026554)	promoter-TSS (NM_026554)	332	NR_027897	106264	Mm.347369	NM_025320		0610012G03Rik	AI839730	RIKEN cDNA 0610012G03 gene	ncRNA
unique_peak2-36570-3-8--1.58390809140159-1.39487600375387	chr2	170184381	170184700	+	0	NA	intron (NR_040610, intron 2 of 7)	intron (NR_040610, intron 2 of 7)	2679	NR_040610	73303	Mm.443297	NR_040610	ENSMUSG00000086999	Bcas1os2	1700040N02Rik	breast carcinoma amplified sequence 1, opposite strand 2	ncRNA
unique_peak1-4824-17-8-1.04837133676273-1.30305656033811	chr3	144989057	144989813	+	0	NA	intron (NM_027770, intron 6 of 59)	intron (NM_027770, intron 6 of 59)	33999	NM_027770	71355	Mm.235570	NM_027770	ENSMUSG00000028197	Col24a1	5430404K19Rik	collagen, type XXIV, alpha 1	protein-coding
unique_peak1-5261-11-0-3.50869358425161-3.61235994796777	chr5	64365435	64366029	+	0	NA	Intergenic	MTC|LTR|MaLR	-5596	NM_145923	100532	Mm.243632	NM_145923	ENSMUSG00000047881	Rell1	AA536743	RELT-like 1	protein-coding
common_peak1-15235-38-46-0.0168638076208927-0.31027100108714	chr4	6365235	6366257	+	0	NA	intron (NM_010945, intron 2 of 30)	(CAAA)n|Simple_repeat|Simple_repeat	15672	NM_010945	18201	Mm.3059	NM_010945	ENSMUSG00000028245	Nsmaf	AA959567|C630007J05|Fan	neutral sphingomyelinase (N-SMase) activation associated factor	protein-coding
common_peak1-12055-12-20--0.743541437691122-0.625923329873571	chr17	22817349	22818044	+	0	NA	Intergenic	MERVK26-int|LTR|ERVK	79581	NM_001104575	628185	Mm.390947	NM_001104575	ENSMUSG00000094921	Vmn2r112	EG628185|V2rp1	vomeronasal 2, receptor 112	protein-coding
unique_peak2-35954-3-4--0.73591118484664-0.864171920961574	chr19	11964896	11965137	+	0	NA	Intergenic	B4A|SINE|B4	-5497	NM_146410	258405	Mm.358933	NM_146410	ENSMUSG00000060878	Olfr1420	MOR266-4	olfactory receptor 1420	protein-coding
common_peak1-15777-24-20-0.400892479988956-0.591915184368645	chr4	155150304	155151170	+	0	NA	Intergenic	Intergenic	-2067	NM_147776	246228	Mm.26515	NM_147776	ENSMUSG00000042116	Vwa1	4932416A11Rik|WARP	von Willebrand factor A domain containing 1	protein-coding
common_peak2-24304-20-34--0.641208232353773-0.863762398024911	chr17	27819582	27820802	+	0	NA	intron (NM_001286744, intron 1 of 9)	intron (NM_001286744, intron 1 of 9)	-1992	NM_178365	23969	Mm.4926	NM_011861	ENSMUSG00000040276	Pacsin1	A830061D09Rik|H74|mKIAA1379|syndapin	protein kinase C and casein kinase substrate in neurons 1	protein-coding
common_peak2-31169-10-18--0.891512168434816-0.804350088532826	chr8	46151722	46152370	+	0	NA	Intergenic	Intergenic	-1274	NR_033588	434310	Mm.334512	NR_033588	ENSMUSG00000066158	AY512931	-	cDNA sequence AY512931	ncRNA
common_peak2-29840-46-39-0.576067848361439-1.27570999829275	chr6	95718016	95718962	+	0	NA	Intergenic	MTC|LTR|MaLR	-49649	NM_011507	20917	Mm.371585	NM_011507	ENSMUSG00000061838	Suclg2	AF171077|AW556404|D6Wsu120e|SCS-betaG	succinate-Coenzyme A ligase, GDP-forming, beta subunit	protein-coding
common_peak2-19612-39-39-0.293833152031791-0.548322060310103	chr1	34849867	34851710	+	0	NA	Intergenic	L1MA5|LINE|L1	-7779	NM_183019	226970	Mm.41604	NM_183019	ENSMUSG00000037509	Arhgef4	9330140K16Rik|Asef|ENSMUSG00000070955	Rho guanine nucleotide exchange factor (GEF) 4	protein-coding
common_peak2-25120-42-55--0.0650255941904199-0.303022200133692	chr18	38601324	38602819	+	0	NA	intron (NM_022996, intron 1 of 7)	intron (NM_022996, intron 1 of 7)	23442	NM_022996	65113	Mm.102496	NM_022996	ENSMUSG00000024425	Ndfip1	0610010M22Rik|N4wbp5	Nedd4 family interacting protein 1	protein-coding
unique_peak1-5891-9-0-3.18961340640422-3.01029995663981	chr6	86839240	86839735	+	0	NA	intron (NM_001040106, intron 1 of 20)	L1MC4|LINE|L1	39976	NM_001040106	269774	Mm.221038	NM_177762	ENSMUSG00000057230	Aak1	5530400K14Rik|9630042K20|AU067724|AU067726|BC028270|C79663|D6Ertd245e|R75501|mKIAA1048	AP2 associated kinase 1	protein-coding
common_peak2-31071-28-29-0.146068524212944-0.357106932979091	chr8	23037466	23038590	+	0	NA	Intergenic	Intergenic	5154	NM_139222	246082	Mm.390015	NM_139222	ENSMUSG00000048500	Defb15	BD-15	defensin beta 15	protein-coding
unique_peak1-912-18-7-1.31291915122835-1.71830443967823	chr11	43958402	43959192	+	0	NA	Intergenic	RMER5|LTR|ERV1	-244058	NM_001284381	11548	Mm.39086	NM_007416	ENSMUSG00000050541	Adra1b	[a]1b	adrenergic receptor, alpha 1b	protein-coding
unique_peak2-37133-6-6--0.241956811677302-0.947717972411649	chr4	16163119	16163525	+	0	NA	intron (NR_045765, intron 3 of 6)	intron (NR_045765, intron 3 of 6)	72065	NR_045765	100415915	Mm.387180	NR_045765	ENSMUSG00000085112	A530072M11Rik	-	RIKEN cDNA gene A530072M11	ncRNA
common_peak2-23425-17-12-0.517856620063946-0.647240723060192	chr15	61609059	61609522	+	0	NA	Intergenic	Intergenic	-3284	NR_040350	432956	Mm.404918	NR_040350		D030024E09Rik	-	RIKEN cDNA D030024E09 gene	ncRNA
unique_peak2-39516-5-10--1.16381195464315-1.33892459842472	chr9	64179267	64179748	+	0	NA	intron (NM_001001295, intron 2 of 16)	intron (NM_001001295, intron 2 of 16)	8757	NM_172519	213550	Mm.268341	NM_172519	ENSMUSG00000032396	Dis3l	AV340375	DIS3 mitotic control homolog (S. cerevisiae)-like	protein-coding
unique_peak2-36311-3-8--1.58390809140159-1.39487600375387	chr2	76647517	76648006	+	0	NA	intron (NM_011652, intron 185 of 312)	intron (NM_011652, intron 185 of 312)	134389	NM_031256	83435	Mm.41636	NM_031256	ENSMUSG00000002733	Plekha3	FAPP1	pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 3	protein-coding
common_peak2-32310-13-24--0.865384159136956-0.879255460030357	chrX	52911899	52912840	+	0	NA	Intergenic	RLTR13A3|LTR|ERVK	107596	NM_001220497	100039055	Mm.380174	NM_001220497		Gm16404	EG625711	predicted gene 16404	protein-coding
common_peak2-32189-38-12-1.87101294115744-5.32350905908393	chr9	117962280	117962956	+	0	NA	intron (NM_001286508, intron 5 of 7)	intron (NM_001286508, intron 5 of 7)	12978	NM_013727	27215	Mm.92705	NM_013727	ENSMUSG00000039285	Azi2	AA410145|AZ2	5-azacytidine induced gene 2	protein-coding
unique_peak1-4015-9-2-1.60465090568306-1.87199725847353	chr2	38472870	38473354	+	0	NA	intron (NM_011187, intron 5 of 7)	intron (NM_011187, intron 5 of 7)	26314	NM_011187	19177	Mm.389251	NM_011187	ENSMUSG00000026750	Psmb7	AU020723|MC14	proteasome (prosome, macropain) subunit, beta type 7	protein-coding
common_peak2-25124-8-6-0.197867495889966-1.03789460276074	chr18	38867452	38867790	+	0	NA	Intergenic	MTD|LTR|MaLR	-106699	NM_011898	24066	Mm.42038	NM_011898	ENSMUSG00000024427	Spry4	A030006O18Rik|sprouty4	sprouty homolog 4 (Drosophila)	protein-coding
common_peak2-23483-11-8-0.338768582809301-1.14218153353838	chr15	74921772	74922167	+	0	NA	Intergenic	RMER10B|LTR|ERVL	20410	NM_001099217	100041546	Mm.482110	NM_001099217	ENSMUSG00000022584	Ly6c2	Ly-6C.2|Ly-6C2	lymphocyte antigen 6 complex, locus C2	protein-coding
unique_peak2-35257-5-5--0.289342836727009-0.909929411522249	chr17	8371828	8372426	+	0	NA	intron (NM_001197046, intron 7 of 12)	intron (NM_001197046, intron 7 of 12)	13744	NM_201230	75296	Mm.227250	NM_201230	ENSMUSG00000069135	Fgfr1op	4930553O10Rik|FOP	Fgfr1 oncogene partner	protein-coding
common_peak1-18600-26-27-0.120544170100858-0.335332249061431	chr8	106683075	106683755	+	0	NA	Intergenic	Lx6|LINE|L1	-10998	NM_001141924	65115	Mm.41849	NM_001141922	ENSMUSG00000031872	Bean1	Bean	brain expressed, associated with Nedd4, 1	protein-coding
common_peak1-8901-52-47-0.523297489544543-1.21256932621262	chr11	50130783	50132041	+	0	NA	intron (NM_001110500, intron 1 of 14)	AT_rich|Low_complexity|Low_complexity	7763	NM_001110499	12330	Mm.248827	NM_007597	ENSMUSG00000020368	Canx	1110069N15Rik|AI988026|Cnx|D11Ertd153e	calnexin	protein-coding
common_peak1-12623-25-19-0.539921810457743-0.756750750680359	chr18	32377333	32378486	+	0	NA	intron (NM_011946, intron 13 of 16)	(CA)n|Simple_repeat|Simple_repeat	-22076	NM_133658	13872	Mm.282335	NM_133658	ENSMUSG00000024382	Ercc3	BTF2 p89|Ercc-3|XPB	excision repair cross-complementing rodent repair deficiency, complementation group 3	protein-coding
common_peak2-30860-10-15--0.643584654991231-0.519648556297791	chr7	139267417	139268345	+	0	NA	intron (NM_018867, intron 6 of 13)	intron (NM_018867, intron 6 of 13)	78543	NM_018867	55987	Mm.471654	NM_018867	ENSMUSG00000030862	Cpxm2	4632435C11Rik|CPX-2|Cpx2	carboxypeptidase X 2 (M14 family)	protein-coding
common_peak2-32366-16-14-0.211373046659543-0.364171515310935	chrX	101429503	101430218	+	0	NA	Intergenic	Intergenic	-33404	NM_001077354	245555	Mm.381907	NM_001077354	ENSMUSG00000046449	C77370	A230051P11|C77386|Kiaa2022|Xpn|mKIAA2022	expressed sequence C77370	protein-coding
unique_peak2-34785-7-6--0.00826409175941478-0.97990265578305	chr15	62028725	62029167	+	0	NA	intron (NR_003368, intron 5 of 8)	intron (NR_003368, intron 5 of 8)	22060	NR_003523	67552	Mm.484027	NM_026230		H2afy3	4933432H23Rik	H2A histone family, member Y3	pseudo
unique_peak1-1349-10-3-1.35641534500877-1.75805390616669	chr12	17373933	17374686	+	0	NA	intron (NM_001008421, intron 9 of 20)	B3A|SINE|B2	12111	NR_037226	100526470		NR_037226		Mir3066	mmu-mir-3066	microRNA 3066	ncRNA
common_peak1-14170-11-8-0.338768582809301-1.14218153353838	chr2	140760527	140761098	+	0	NA	intron (NM_001013802, intron 4 of 18)	intron (NM_001013802, intron 4 of 18)	-263600	NM_178382	71436	Mm.426781	NM_178382	ENSMUSG00000051379	Flrt3	5530600M07Rik|C430047I10Rik|mKIAA1469	fibronectin leucine rich transmembrane protein 3	protein-coding
unique_peak2-37206-2-5--1.50241675698448-1.08602067057793	chr4	65605074	65605486	+	0	NA	intron (NM_207109, intron 7 of 22)	intron (NM_207109, intron 7 of 22)	339260	NM_001161782	69807	Mm.22786	NM_053084	ENSMUSG00000051675	Trim32	1810045E12Rik|3f3|BBS11|Zfp117	tripartite motif-containing 32	protein-coding
common_peak2-29262-13-24--0.865384159136956-0.879255460030357	chr5	140704421	140704916	+	0	NA	intron (NM_010752, intron 10 of 17)	intron (NM_010752, intron 10 of 17)	92838	NM_010752	17120	Mm.27250	NM_010752	ENSMUSG00000029554	Mad1l1	AI173502|AW550425|Mad1	MAD1 mitotic arrest deficient 1-like 1	protein-coding
common_peak2-28860-20-32--0.55631933476726-0.705485015404196	chr5	74093031	74093780	+	0	NA	Intergenic	Intergenic	50786	NM_178387	73472	Mm.87067	NM_178387	ENSMUSG00000029155	Spata18	1700067I02Rik	spermatogenesis associated 18	protein-coding
unique_peak2-35117-1-9--2.94898510510411-2.31132995230379	chr16	25387961	25388280	+	0	NA	intron (NM_175165, intron 4 of 5)	RSINE1|SINE|B4	101217	NM_175165	71338	Mm.126851	NM_175165	ENSMUSG00000048399	Tprg	5430420C16Rik|Tprg1	transformation related protein 63 regulated	protein-coding
common_peak2-24350-34-40-0.0245165223831822-0.311623594475992	chr17	5978136	5978824	+	0	NA	intron (NM_001113352, intron 2 of 25)	intron (NM_001113352, intron 2 of 25)	2894	NM_011523	20975	Mm.236068	NM_011523	ENSMUSG00000023805	Synj2	AI481647|SJ2|mKIAA0348	synaptojanin 2	protein-coding
unique_peak1-4504-11-0-3.50869358425161-3.61235994796777	chr3	19663514	19664014	+	0	NA	Intergenic	MYSERV16_I-int|LTR|ERVK	-68368	NM_205769	12918	Mm.290689	NM_205769	ENSMUSG00000049796	Crh	CRF|Gm1347	corticotropin releasing hormone	protein-coding
unique_peak1-2824-10-0-3.35641534500877-3.31132995230379	chr17	26631336	26631865	+	0	NA	Intergenic	RLTR11A|LTR|ERVK	13817	NM_013642	19252	Mm.239041	NM_013642	ENSMUSG00000024190	Dusp1	3CH134|MKP1|Ptpn16|U19515|erp|mkp-1	dual specificity phosphatase 1	protein-coding
unique_peak1-4187-10-5-0.771452844287613-1.33892459842472	chr2	117598323	117598861	+	0	NA	Intergenic	RMER17D2|LTR|ERVK	-49072	NR_040631	73938	Mm.399107	NR_040631	ENSMUSG00000086221	4930412B13Rik	-	RIKEN cDNA 4930412B13 gene	ncRNA
unique_peak1-3379-27-5-2.40658345017408-5.07532537266956	chr19	3810095	3810924	+	0	NA	intron (NM_001167885, intron 12 of 12)	intron (NM_001167885, intron 12 of 12)	-41264	NM_001271496	12660	Mm.225505	NM_013490	ENSMUSG00000024843	Chka	CK|CK/EK-alpha|Chetk-alpha|Chk|ChoK|EK|EtnK-alpha	choline kinase alpha	protein-coding
common_peak1-10645-64-52-0.737525947145405-2.33395341189245	chr14	46965541	46967533	+	0	NA	Intergenic	Intergenic	-32662	NR_037981	100041724	Mm.383311	NM_001099324	ENSMUSG00000079261	Gm15217	OTTMUSG00000019524	predicted gene 15217	ncRNA
unique_peak1-7264-7-1-1.79909083029819-1.80617997398389	chr9	95795910	95796367	+	0	NA	intron (NM_019864, intron 21 of 46)	ID_B1|SINE|B4	-37837	NM_001271569	73410	Mm.443314	NM_028533		1700065D16Rik	-	RIKEN cDNA 1700065D16 gene	protein-coding
unique_peak1-831-16-8-0.948338640825749-1.02063122982878	chr11	8626806	8627619	+	0	NA	Intergenic	RMER20B|LTR|ERVK	-62674	NM_001083587	319939	Mm.337820	NM_001083587	ENSMUSG00000020422	Tns3	BC023928|F830010I22Rik|TEM6|Tens1	tensin 3	protein-coding
unique_peak2-38693-9-15--0.81038659359578-0.630231561310125	chr7	102249668	102250295	+	0	NA	Intergenic	Lx2A1|LINE|L1	-1109166	NM_011858	23966	Mm.254610	NM_011858	ENSMUSG00000048078	Tenm4	Doc4|ELM2|Odz4|R75022|Ten-m4|l(7)-3Rn|l7Rn3|mKIAA1302	teneurin transmembrane protein 4	protein-coding
common_peak2-20475-18-7-1.31291915122835-1.71830443967823	chr10	44016096	44016535	+	0	NA	intron (NM_053069, intron 4 of 7)	intron (NM_053069, intron 4 of 7)	28151	NM_053069	11793	Mm.22264	NM_053069	ENSMUSG00000038160	Atg5	2010107M05Rik|3110067M24Rik|AW319544|Apg5l|Atg5l|C88337|Paddy	autophagy related 5	protein-coding
common_peak1-11814-9-25--1.51082631173687-2.00244947055753	chr16	64873290	64873839	+	0	NA	Intergenic	Intergenic	21653	NM_178647	106143	Mm.10160	NM_178647	ENSMUSG00000054604	Cggbp1	AA960172|AL023996|AW045841	CGG triplet repeat binding protein 1	protein-coding
common_peak2-31514-52-200--1.54279170091323-14.7613219022941	chr8	108703503	108705291	+	0	NA	intron (NM_178798, intron 2 of 9)	intron (NM_178798, intron 2 of 9)	11622	NM_178798	330836	Mm.46749	NM_178798	ENSMUSG00000031904	Slc7a6	AI643885|LAT-2|LAT3	solute carrier family 7 (cationic amino acid transporter, y+ system), member 6	protein-coding
unique_peak1-3436-8-0-3.00522241794757-2.70926996097583	chr19	6627287	6627668	+	0	NA	Intergenic	L2|LINE|L2	-84407	NM_009203	20521	Mm.391146	NM_009203	ENSMUSG00000061742	Slc22a12	AI987855|OAT4L|Rst|Slc22al2|URAT1	solute carrier family 22 (organic anion/cation transporter), member 12	protein-coding
unique_peak2-36081-10-7-0.356415345008769-1.12966497611638	chr19	55795780	55796290	+	0	NA	Intergenic	Intergenic	-19341	NR_045318	77594	Mm.329924	NR_045318	ENSMUSG00000097632	4930552P12Rik	-	RIKEN cDNA 4930552P12 gene	ncRNA
unique_peak2-35019-8-8--0.164702583494742-1.00793137938329	chr15	102145141	102145668	+	0	NA	intron (NM_001014976, intron 17 of 30)	intron (NM_001014976, intron 17 of 30)	-11143	NM_027044	56612	Mm.158264	NM_020031		Pfdn5	1190001O17Rik|1700010A06Rik|D15Ertd697e|Eig1|MM-1	prefoldin 5	protein-coding
unique_peak1-5038-6-0-2.5653981103803-2.10720996964787	chr4	133108590	133109096	+	0	NA	promoter-TSS (NM_011850)	promoter-TSS (NM_011850)	-462	NM_011850	23957	Mm.346759	NM_011850	ENSMUSG00000037583	Nr0b2	SHP|SHP-1|Shp1	nuclear receptor subfamily 0, group B, member 2	protein-coding
common_peak1-14600-38-50--0.100972682672965-0.309893763698769	chr3	51483256	51484752	+	0	NA	intron (NM_174995, intron 3 of 4)	B1_Mus1|SINE|Alu	18889	NM_174995	211666	Mm.24679	NM_174995	ENSMUSG00000074604	Mgst2	GST2|MGST-II	microsomal glutathione S-transferase 2	protein-coding
unique_peak1-2429-10-3-1.35641534500877-1.75805390616669	chr15	101233756	101234277	+	0	NA	Intergenic	B4A|SINE|B4	-8818	NM_033073	110310	Mm.486285	NM_033073		Krt7	D15Wsu77e|K7|Krt2-7	keratin 7	protein-coding
unique_peak2-34582-4-8--1.19338551529556-1.21878474469819	chr14	69280889	69281352	+	0	NA	Intergenic	Intergenic	-7221	NM_183366	13522	Mm.117450	NM_010082	ENSMUSG00000014725	Adam28	C130072N01Rik|D430033C21Rik|Dtgn1|MDC-L|MDC-Lm|MDC-Ls|MDCL|TECADAM|eMDCII	a disintegrin and metallopeptidase domain 28	protein-coding
unique_peak2-37384-1-5--2.2120195109379-1.32905871926422	chr4	139251732	139252040	+	0	NA	Intergenic	Intergenic	42433	NM_031873	83770	Mm.190612	NM_031873	ENSMUSG00000028738	Tas1r2	Gpr71|T1r2|TR2	taste receptor, type 1, member 2	protein-coding
unique_peak2-33713-2-6--1.72480917832092-1.26211192963361	chr11	113194438	113194859	+	0	NA	intron (NM_027216, intron 6 of 9)	intron (NM_027216, intron 6 of 9)	-123665	NR_040276	319871	Mm.383743	NR_040276	ENSMUSG00000085421	4732490B19Rik	-	RIKEN cDNA 4732490B19 gene	ncRNA
unique_peak1-5514-19-7-1.40268732666169-1.89173646618542	chr5	137610682	137611510	+	0	NA	Intergenic	Intergenic	-19019	NM_201373	384309	Mm.100647	NM_201373		Trim56	A130009K11Rik|Gm452|RNF109	tripartite motif-containing 56	protein-coding
common_peak1-15502-37-47--0.0589694292353373-0.303364957229384	chr4	116052684	116054171	+	0	NA	intron (NM_008641, intron 4 of 28)	Lx2B|LINE|L1	83359	NM_001042743	17776	Mm.9287	NM_008641	ENSMUSG00000003810	Mast2	MAST205|Mtssk	microtubule associated serine/threonine kinase 2	protein-coding
common_peak2-20030-30-44--0.322177686837802-0.475038482441584	chr1	136345349	136346308	+	0	NA	Intergenic	Intergenic	-6304	NM_153128	240756	Mm.87398	NM_153128	ENSMUSG00000026455	Klhl12	C3ip1	kelch-like 12	protein-coding
common_peak2-23356-8-5-0.420259917226415-1.10484139239135	chr15	44364637	44365046	+	0	NA	intron (NM_138674, intron 39 of 76)	intron (NM_138674, intron 39 of 76)	75742	NM_138674	192190	Mm.211494	NM_138674	ENSMUSG00000038725	Pkhd1l1	AB055648|PKHDL1	polycystic kidney and hepatic disease 1-like 1	protein-coding
unique_peak1-6252-13-5-1.19350952991661-1.95509489018123	chr7	19508460	19509154	+	0	NA	Intergenic	Intergenic	-2430	NM_001029877	384569	Mm.262724	NM_001029877	ENSMUSG00000030411	Nova2	Gm1424	neuro-oncological ventral antigen 2	protein-coding
unique_peak1-1954-16-0-4.11826364226806-5.41853992195166	chr14	101834467	101835065	+	0	NA	Intergenic	MTD|LTR|MaLR	173642	NM_001081278	210789	Mm.320639	NM_173380	ENSMUSG00000033083	Tbc1d4	5930406J04Rik|A930035N22|AV295684|As160	TBC1 domain family, member 4	protein-coding
common_peak1-19413-6-18--1.68252940306328-1.66449268468235	chrX	73787093	73787470	+	0	NA	Intergenic	Intergenic	60982	NM_001201395	74987	Mm.107996	NM_001201395	ENSMUSG00000079525	4930468A15Rik	-	RIKEN cDNA 4930468A15 gene	protein-coding
unique_peak1-3974-12-5-1.06381348436648-1.78669045979184	chr2	32509872	32510368	+	0	NA	intron (NM_001146348, intron 1 of 14)	intron (NM_001146348, intron 1 of 14)	8005	NM_001146348	13805	Mm.225297	NM_007932	ENSMUSG00000026814	Eng	AI528660|AI662476|CD105|Endo|S-endoglin	endoglin	protein-coding
common_peak1-13716-12-11-0.0638134843664826-0.337263207250336	chr2	30758674	30759275	+	0	NA	promoter-TSS (NM_022415)	promoter-TSS (NM_022415)	-157	NM_022415	64292	Mm.28768	NM_022415	ENSMUSG00000050737	Ptges	2410099E23Rik|D2Ertd369e|Pges|mPGES|mPGES-1	prostaglandin E synthase	protein-coding
unique_peak1-206-8-1-2.00522241794757-2.05605744720049	chr1	86038322	86038835	+	0	NA	Intergenic	Intergenic	-771437	NM_001037909	620078	Mm.386456	NM_175219	ENSMUSG00000052477	C130026I21Rik	4930565N07Rik|OTTMUSG00000029174	RIKEN cDNA C130026I21 gene	protein-coding
common_peak1-10989-16-23--0.466698858453094-0.497202060940027	chr15	35937299	35937961	+	0	NA	Intergenic	RMER19C|LTR|ERVK	-69629	NM_053071	12864	Mm.548	NM_053071	ENSMUSG00000014313	Cox6c	-	cytochrome c oxidase subunit VIc	protein-coding
common_peak2-30494-13-11-0.193509529916613-0.379391706698377	chr7	61339770	61340220	+	0	NA	Intergenic	LTRIS_Mm|LTR|ERV1	-192736	NR_105746	102466619		NR_105746	miRBase:MI0021585	Mir6238	mmu-mir-6238	microRNA mir-6238	ncRNA
common_peak2-30653-10-10--0.103016273628528-0.301029995663987	chr7	99858513	99858896	+	0	NA	Intergenic	Intergenic	31265	NR_015510	666737	Mm.473620	NR_015510	ENSMUSG00000074024	4632427E13Rik	AU015482	RIKEN cDNA 4632427E13 gene	ncRNA
common_peak1-19505-17-8-1.04837133676273-1.30305656033811	chrX	164269309	164269941	+	0	NA	intron (NM_001290427, intron 2 of 17)	MER44B|DNA|MER2_type	23384	NM_001290428	333605	Mm.426168	NM_001033330	ENSMUSG00000049176	Frmpd4	Gm196|PKAP1|Pdzd10|Pdzk10|Preso1|preso	FERM and PDZ domain containing 4	protein-coding
common_peak2-22338-9-29--1.7172771892043-2.70611768348013	chr13	23574438	23574956	+	0	NA	exon (NM_001289615, exon 4 of 8)	exon (NM_001289615, exon 4 of 8)	6029	NM_001289615	238555	Mm.129668	NM_175938		Btn2a2	Btn2|D030063K05	butyrophilin, subfamily 2, member A2	protein-coding
unique_peak2-35549-7-32--2.24530328906026-4.07016573886258	chr17	62882610	62883362	+	0	NA	Intergenic	Lx7|LINE|L1	347680	NM_207654	13640	Mm.7978	NM_010109		Efna5	AL-1|AV158822|EFL-5|Ephrin-A5|Epl7|LERK-7|RAGS	ephrin A5	protein-coding
common_peak2-28597-12-10-0.189344366450341-0.386243247519795	chr5	21645844	21646451	+	0	NA	intron (NM_011261, intron 6 of 63)	intron (NM_011261, intron 6 of 63)	204376	NM_011261	19699	Mm.425236	NM_011261	ENSMUSG00000042453	Reln	reeler|rl	reelin	protein-coding
common_peak1-7824-10-7-0.356415345008769-1.12966497611638	chr1	127206357	127206900	+	0	NA	Intergenic	Intergenic	125676	NM_023735	74117	Mm.183102	NM_023735	ENSMUSG00000026341	Actr3	1200003A09Rik|Arp3	ARP3 actin-related protein 3	protein-coding
common_peak2-22048-27-28-0.133564955767664-0.358978896303361	chr12	69502087	69503029	+	0	NA	Intergenic	Intergenic	-732300	NR_033146	100316870	Mm.379794	NR_033146		Gm17821	-	DDB1 and CUL4 associated factor 5 pseudogene	pseudo
common_peak2-28181-30-47--0.415287091229283-0.618527319161325	chr4	114986394	114987784	+	0	NA	intron (NM_177406, intron 4 of 11)	L1Md_A|LINE|L1	15438	NM_177406	277753	Mm.276106	NM_177406	ENSMUSG00000066071	Cyp4a12a	BC025936|Cyp4a12	cytochrome P450, family 4, subfamily a, polypeptide 12a	protein-coding
common_peak1-13813-39-98--1.01359537316046-3.91655448954905	chr2	51147609	51149027	+	0	NA	intron (NR_040636, intron 1 of 2)	Lx9|LINE|L1	50967	NR_040636	329404	Mm.417725	NR_040636	ENSMUSG00000086349	Gm13497	A730015I17|OTTMUSG00000012425	predicted gene 13497	ncRNA
unique_peak1-2897-32-3-3.27909201921966-8.25070305503181	chr17	45618891	45620125	+	0	NA	Intergenic	Intergenic	-7621	NM_027649	71020	Mm.44257	NM_027649	ENSMUSG00000023935	Spats1	1700011H05Rik|4933400B06Rik|Daip2|Ddip|Srsp1	spermatogenesis associated, serine-rich 1	protein-coding
unique_peak1-5998-14-5-1.31425365963649-1.4372489031793	chr6	100194780	100195335	+	0	NA	intron (NM_019743, intron 2 of 4)	intron (NM_019743, intron 2 of 4)	42295	NM_019743	56353	Mm.321633	NM_019743	ENSMUSG00000072872	Rybp	2410018J24Rik|DEDAF|YEAF1	RING1 and YY1 binding protein	protein-coding
common_peak1-13587-48-43-0.511495532597517-1.12538602347823	chr2	14603794	14605606	+	0	NA	intron (NM_023116, intron 2 of 13)	Lx7|LINE|L1	-37569	NR_028497	625342	Mm.484784	NR_028497		Gm13315	OTTMUSG00000011384	lactate dehydrogenase A pseudogene	pseudo
common_peak1-17929-12-13--0.158578936969966-0.301029995663979	chr7	127027619	127028292	+	0	NA	intron (NM_001163703, intron 1 of 2)	intron (NM_001163703, intron 1 of 2)	11017	NM_173408	233805	Mm.31539	NM_173408	ENSMUSG00000048787	Dcun1d3	1700020A13Rik|BC030335	DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)	protein-coding
unique_peak2-37278-8-19--1.31670567693979-1.30305656033811	chr4	116507611	116508578	+	0	NA	Intergenic	(T)n|Simple_repeat|Simple_repeat	-13981	NM_146256	242642	Mm.279897	NM_146256	ENSMUSG00000043155	Hpdl	A830048M07Rik|BC034099|Gloxd1	4-hydroxyphenylpyruvate dioxygenase-like	protein-coding
common_peak1-12460-18-18-0.0649916377847664-0.323898164595606	chr17	84042718	84043542	+	0	NA	Intergenic	Intergenic	-11895	NM_153512	225030	Mm.223506	NM_153512	ENSMUSG00000045053	Kcng3	KV6.3|Kv10.1a|Kv10.1b	potassium voltage-gated channel, subfamily G, member 3	protein-coding
common_peak2-32250-42-39-0.420401232979821-0.828688081372012	chrX	7429122	7430892	+	0	NA	intron (NM_001290536, intron 1 of 8)	intron (NM_001290536, intron 1 of 8)	10799	NM_001290537	54644	Mm.142827	NM_138604	ENSMUSG00000031154	Otud5	AA407879|AI553596|BB114028|DUBA|DXImx46e|Sfc7	OTU domain containing 5	protein-coding
common_peak2-30275-17-32--0.826097781153416-1.02859851787301	chr7	16313377	16314042	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-22010	NM_145709	252829	Mm.222738	NM_145709		Obox5	C87544	oocyte specific homeobox 5	protein-coding
unique_peak2-38160-2-7--1.91745425626332-1.45399745587252	chr6	87222930	87223295	+	0	NA	intron (NM_054041, intron 8 of 17)	intron (NM_054041, intron 8 of 17)	62657	NM_054041	69538	Mm.232525	NM_054041	ENSMUSG00000033420	Antxr1	2310008J16Rik|2810405N18Rik|Antrx1|Tem8	anthrax toxin receptor 1	protein-coding
unique_peak2-33001-15-53--1.74272275160781-4.84405324694467	chr10	61146673	61148135	+	0	NA	intron (NM_009120, intron 1 of 6)	B3|SINE|B2	4335	NM_009120	20224	Mm.391794	NM_009120	ENSMUSG00000020088	Sar1a	1600019H17Rik|Sara|Sara1	SAR1 gene homolog A (S. cerevisiae)	protein-coding
unique_peak2-39616-0-10--4.29956254911151-2.57096726280955	chr9	89831498	89832123	+	0	NA	intron (NM_011245, intron 2 of 26)	L1VL4|LINE|L1	27197	NM_001039655	19417	Mm.44561	NM_011245	ENSMUSG00000032356	Rasgrf1	AI844718|CDC25|CDC25Mm|Gnrp|Grf1|Grfbeta|P190-A|Ras-GRF1|p190|p190RhoGEF	RAS protein-specific guanine nucleotide-releasing factor 1	protein-coding
common_peak1-14533-32-22-0.755530063162647-1.34355844763204	chr3	30594890	30596127	+	0	NA	Intergenic	Intergenic	48700	NM_001290510	68307	Mm.389425	NM_026668	ENSMUSG00000027703	Lrriq4	4930558O21Rik	leucine-rich repeats and IQ motif containing 4	protein-coding
common_peak1-14846-44-45-0.298330878511522-0.60830192689697	chr3	94782867	94784067	+	0	NA	intron (NM_001293716, intron 1 of 9)	intron (NM_001293716, intron 1 of 9)	4814	NM_001293716	107650	Mm.217222	NM_175356	ENSMUSG00000038861	Pi4kb	ESTM41|PI4K-beta|PI4Kbeta|Pik4cb	phosphatidylinositol 4-kinase, catalytic, beta polypeptide	protein-coding
common_peak1-7928-27-15-0.991545950895236-1.66700866096458	chr1	149862408	149863480	+	0	NA	Intergenic	Lx3C|LINE|L1	1518127	NM_001145807	215378	Mm.441817	NM_153539	ENSMUSG00000035131	Brinp3	B830045N13Rik|Fam5c	bone morphogenetic protein/retinoic acid inducible neural specific 3	protein-coding
common_peak1-11520-30-23-0.584712908770717-0.92816130897933	chr16	91372242	91373594	+	0	NA	promoter-TSS (NM_010509)	promoter-TSS (NM_010509)	-110	NM_010509	15976	Mm.6834	NM_010509	ENSMUSG00000022971	Ifnar2	AI747302|Ifnar-2	interferon (alpha and beta) receptor 2	protein-coding
common_peak2-31460-20-18-0.240147271147608-0.388034239052786	chr8	105593655	105594512	+	0	NA	Intergenic	L1MA6|LINE|L1	277351	NR_036588	69794	Mm.396139	NR_036588		1600027J07Rik	-	RIKEN cDNA 1600027J07 gene	ncRNA
common_peak2-30876-15-39--1.30976334433171-2.45517123152778	chr7	141168064	141168873	+	0	NA	intron (NM_007400, intron 6 of 22)	intron (NM_007400, intron 6 of 22)	-194000	NM_001286031	101437	Mm.199223	NM_133941	ENSMUSG00000030986	Dhx32	3110079L04Rik|4732469F02Rik|AA408140|Ddx32	DEAH (Asp-Glu-Ala-His) box polypeptide 32	protein-coding
common_peak2-21049-11-17--0.661231417190699-0.58239619684445	chr11	43183226	43183663	+	0	NA	Intergenic	MER5A|DNA|MER1_type	4519	NR_029558	387164		NR_029558	miRBase:MI0000170	Mir146	Mirn146|miR-146a|mmu-mir-146	microRNA 146	ncRNA
unique_peak1-4171-6-5--0.0195643903408542-0.947717972411649	chr2	112433754	112434211	+	0	NA	intron (NM_001165935, intron 1 of 4)	intron (NM_001165935, intron 1 of 4)	34143	NM_001165935	74268	Mm.315125	NM_028844		Aven	1700013A01Rik|1700056A21Rik|mAven-L|mAven-S	apoptosis, caspase activation inhibitor	protein-coding
common_peak1-14765-13-7-0.778472030637769-0.817533494790411	chr3	88454939	88455539	+	0	NA	TTS (NM_181817)	TTS (NM_181817)	1825	NM_181817	242093	Mm.269130	NM_181817	ENSMUSG00000049741	Rxfp4	GPCR142|Gpr100|Rln3r2|SALPR	relaxin family peptide receptor 4	protein-coding
common_peak2-29194-27-36--0.217907414733714-0.352152970649951	chr5	135962741	135963695	+	0	NA	intron (NM_146001, intron 1 of 30)	RSINE1|SINE|B4	57774	NM_146001	215114	Mm.280805	NM_146001	ENSMUSG00000039959	Hip1	2610109B09Rik|A930014B11Rik|E130315I21Rik|mKIAA4113	huntingtin interacting protein 1	protein-coding
unique_peak2-37410-10-18--0.891512168434816-0.804350088532826	chr4	145774300	145774911	+	0	NA	Intergenic	Intergenic	-25596	NM_001085522	433791	Mm.276881	NM_001085522	ENSMUSG00000070605	Gm13251	OTTMUSG00000011097	predicted gene 13251	protein-coding
common_peak2-31549-64-60-0.534709064145717-1.458285647713	chr8	111725976	111727393	+	0	NA	Intergenic	ORR1B1|LTR|MaLR	138124	NR_002928	384864	Mm.390083	NR_002928		Gm1943	-	WD repeat domain 70 pseudogene	pseudo
common_peak2-20655-35-31-0.431370258462504-0.725458513490992	chr10	82354057	82354868	+	0	NA	intron (NM_001042514, intron 13 of 13)	intron (NM_001042514, intron 13 of 13)	25091	NM_025499	66341	Mm.443284	NM_025499		Eid3	1700027M21Rik|NS4EB	EP300 interacting inhibitor of differentiation 3	protein-coding
common_peak1-11238-16-27--0.689091279789542-0.798885335210229	chr15	79690916	79691635	+	0	NA	Intergenic	B4|SINE|B4	-26512	NM_001013362	504193	Mm.38438	NM_029079	ENSMUSG00000022421	Npcd	Cbx6-Nptxr	neuronal pentraxin chromo domain	protein-coding
unique_peak2-38175-0-7--3.84013093047421-1.80617997398389	chr6	90905595	90905909	+	0	NA	Intergenic	MTB_Mm|LTR|MaLR	-145635	NM_001134384	232227	Mm.196943	NM_182784	ENSMUSG00000034312	Iqsec1	AW561907|BC026481|BRAG2|D6Ertd349e|cI-43	IQ motif and Sec7 domain 1	protein-coding
unique_peak1-1944-9-5-0.604650905683064-1.21398586181642	chr14	88399157	88399600	+	0	NA	Intergenic	ID_B1|SINE|B4	471825	NM_178685	219257	Mm.128861	NM_178685	ENSMUSG00000050505	Pcdh20	C630015B17Rik|Pcdh13	protocadherin 20	protein-coding
common_peak2-20110-11-9-0.186765489364251-0.344532117358383	chr1	161130829	161131430	+	0	NA	Intergenic	L1M4b|LINE|L1	-31328	NM_011931	26374	Mm.328135	NM_011931	ENSMUSG00000040782	Rfwd2	AI316802|C80879|Cop1	ring finger and WD repeat domain 2	protein-coding
unique_peak1-2866-14-1-2.89921616035764-3.91338994363176	chr17	34714592	34715308	+	0	NA	exon (NM_010929, exon 18 of 30)	exon (NM_010929, exon 18 of 30)	-11801	NM_134116	106512	Mm.26584	NM_134116	ENSMUSG00000034786	Gpsm3	AA960287|AGS4	G-protein signalling modulator 3 (AGS3-like, C. elegans)	protein-coding
unique_peak2-39128-5-21--2.16381195464315-2.59995804677862	chr8	84104378	84104856	+	0	NA	intron (NM_001297596, intron 2 of 24)	Lx6|LINE|L1	238156	NM_001297593	234515	Mm.324468	NM_001024617	ENSMUSG00000037940	Inpp4b	E130107I17Rik	inositol polyphosphate-4-phosphatase, type II	protein-coding
common_peak2-23810-63-60-0.507575253507703-1.38404115112578	chr15	100599429	100600396	+	0	NA	intron (NM_021530, intron 1 of 24)	B3A|SINE|B2	7734	NM_021530	59033	Mm.209856	NM_021530	ENSMUSG00000023032	Slc4a8	AW493845|C230026C11|NDCBE|kNBC-3	solute carrier family 4 (anion exchanger), member 8	protein-coding
unique_peak1-7410-7-3-0.799090830298189-1.23214870625617	chrX	136171695	136172219	+	0	NA	intron (NM_023270, intron 1 of 6)	RSINE1|SINE|B4	26798	NM_023270	66889	Mm.27764	NM_023270	ENSMUSG00000031438	Rnf128	1300002C13Rik|AI987883|GRAIL|Greul1	ring finger protein 128	protein-coding
common_peak2-24703-14-16--0.188246680892695-0.308035960714963	chr17	45784365	45784996	+	0	NA	intron (NM_001013767, intron 3 of 21)	IAPEz-int|LTR|ERVK	11578	NM_001013767	268958	Mm.426026	NM_001013767	ENSMUSG00000058626	Capn11	-	calpain 11	protein-coding
common_peak1-12334-61-137--0.725775127028829-3.20883862849633	chr17	53479218	53480208	+	0	NA	Intergenic	L1_Mur1|LINE|L1	122933	NM_172497	211482	Mm.60887	NM_172497	ENSMUSG00000023931	Efhb	4921525D22Rik	EF hand domain family, member B	protein-coding
common_peak2-30991-15-13-0.204809828498052-0.368541233333383	chr8	4612598	4613274	+	0	NA	promoter-TSS (NM_145591)	promoter-TSS (NM_145591)	-234	NM_145591	233987	Mm.102799	NM_145591		Zfp958	-	zinc finger protein 958	protein-coding
common_peak2-21641-34-31-0.382068527001266-0.662333595915619	chr11	101626787	101627563	+	0	NA	intron (NM_144831, intron 22 of 22)	B1_Mur1|SINE|Alu	19449	NM_008815	18612	Mm.5025	NM_008815	ENSMUSG00000017724	Etv4	AW414408|Pea-3|Pea3	ets variant 4	protein-coding
unique_peak2-38626-10-17--0.813509656433543-0.699649909729472	chr7	81179015	81179731	+	0	NA	Intergenic	MLT1A1|LTR|MaLR	-20805	NM_009181	20450	Mm.4954	NM_009181	ENSMUSG00000025789	St8sia2	AI323367|ST8SiaII|STX|Siat8b	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2	protein-coding
common_peak1-11414-63-35-1.26838758962828-5.27134665442986	chr15	99332548	99334437	+	0	NA	intron (NM_001038658, intron 11 of 11)	intron (NM_001038658, intron 11 of 11)	25104	NM_028224	72393	Mm.39760	NM_028224	ENSMUSG00000023011	Faim2	2900002L20Rik|Lfg|Lfg2|NMP25|Nmp35|Tmbim2	Fas apoptotic inhibitory molecule 2	protein-coding
common_peak2-25819-12-21--0.810655633549659-0.713635438203849	chr19	38082629	38083723	+	0	NA	intron (NM_001099634, intron 3 of 52)	Lx8|LINE|L1	34891	NM_001099634	226101	Mm.34674	NM_177035	ENSMUSG00000048612	Myof	2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3	myoferlin	protein-coding
unique_peak1-256-14-2-2.31425365963649-3.28500101358144	chr1	91757055	91757645	+	0	NA	intron (NM_001037136, intron 15 of 16)	intron (NM_001037136, intron 15 of 16)	70401	NM_010262	14472	Mm.204730	NM_010262		Gbx2	D130058E05Rik|Gbx-2|MMoxA|Stra7	gastrulation brain homeobox 2	protein-coding
common_peak2-24831-14-13-0.0918612383000403-0.332077462497413	chr17	72918354	72919038	+	0	NA	intron (NM_007439, intron 1 of 28)	intron (NM_007439, intron 1 of 28)	34951	NM_007439	11682	Mm.311854	NM_007439	ENSMUSG00000055471	Alk	CD246|Tcrz	anaplastic lymphoma kinase	protein-coding
common_peak1-8084-32-42--0.147172735482438-0.325162986021101	chr1	179847796	179848847	+	0	NA	Intergenic	L1Md_A|LINE|L1	-73245	NM_001034899	545391	Mm.442974	NM_001034899	ENSMUSG00000091476	Gm16432	EG545391|EG666250	predicted gene 16432	protein-coding
unique_peak1-7114-6-2-0.980435609659146-1.26211192963361	chr9	44905264	44905781	+	0	NA	intron (NM_001005421, intron 6 of 10)	RLTR15|LTR|ERVK	18256	NM_001005421	270152	Mm.190461	NM_001005421	ENSMUSG00000048534	Amica1	AMICA|Crea7|Gm638	adhesion molecule, interacts with CXADR antigen 1	protein-coding
unique_peak1-4953-16-5-1.53330114154691-1.80287260729378	chr4	97757672	97758444	+	0	NA	intron (NM_010905, intron 10 of 10)	intron (NM_010905, intron 10 of 10)	291898	NM_053157	94043	Mm.331719	NM_053157	ENSMUSG00000028563	Tm2d1	2310026L18Rik|AA990549|Bbp	TM2 domain containing 1	protein-coding
unique_peak2-37163-6-12--1.13504160776079-1.45089835786865	chr4	43655933	43656436	+	0	NA	intron (NM_173788, intron 8 of 21)	intron (NM_173788, intron 8 of 21)	10240	NM_001290462	433700	Mm.331569	NM_001007463	ENSMUSG00000066196	Spag8	MH-SPAG8	sperm associated antigen 8	protein-coding
common_peak1-14547-16-30--0.835932668118813-1.0921097739129	chr3	32529147	32530081	+	0	NA	Intergenic	Intergenic	-14157	NM_013531	14696	Mm.139192	NM_013531	ENSMUSG00000027669	Gnb4	6720453A21Rik|G(beta)4	guanine nucleotide binding protein (G protein), beta 4	protein-coding
common_peak2-24290-70-118--0.274850846932545-0.70373109047012	chr17	6782018	6783679	+	0	NA	Intergenic	RLTR1B-int|LTR|ERV1	-23540	NM_001166627	100040531	Mm.457987	NM_001166627	ENSMUSG00000095677	Dynlt1f	100040631|Dynlt1e	dynein light chain Tctex-type 1F	protein-coding
common_peak2-28634-33-31-0.331337562525529-0.549429090733244	chr5	29195356	29195844	+	0	NA	Intergenic	Intergenic	-326933	NM_021470	56874	Mm.87352	NM_021470	ENSMUSG00000029130	Rnf32	1700009J01Rik|2700025B22Rik|4930542N22Rik|Lmbr2	ring finger protein 32	protein-coding
common_peak1-11386-15-7-1.01216475055566-1.08658567012551	chr15	97773858	97774491	+	0	NA	Intergenic	Intergenic	-20486	NM_201359	380967	Mm.196630	NM_201359	ENSMUSG00000052369	Tmem106c	AI046681|BC046621|D15Ertd405e	transmembrane protein 106C	protein-coding
common_peak2-32129-48-36-0.761473785605864-1.92045994443867	chr9	106159693	106160435	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-9779	NM_020559	11655	Mm.290578	NM_020559	ENSMUSG00000032786	Alas1	ALAS|ALAS-N|Alas-1|Alas-h	aminolevulinic acid synthase 1	protein-coding
common_peak2-31112-65-130--0.541257062060323-1.88910091028247	chr8	33599433	33600388	+	0	NA	Intergenic	Intergenic	337543	NR_046039	666589	Mm.367675	NR_046039		Gm8179	EG666589	predicted gene 8179	ncRNA
common_peak1-18665-14-9-0.577288065470282-0.630231561310125	chr8	117257548	117258192	+	0	NA	intron (NM_019573, intron 8 of 8)	B4A|SINE|B4	294318	NM_019573	80707	Mm.440420	NM_019573	ENSMUSG00000004637	Wwox	5330426P09Rik|9030416C10Rik|WOX1	WW domain-containing oxidoreductase	protein-coding
common_peak1-15364-26-18-0.679971578714877-0.959433126956265	chr4	58574261	58575432	+	0	NA	Intergenic	L1ME2|LINE|L1	-8483	NM_010336	14745	Mm.4772	NM_010336	ENSMUSG00000038668	Lpar1	AI326300|Edg2|Gpcr26|Kdt2|lpA1|vzg-1	lysophosphatidic acid receptor 1	protein-coding
common_peak1-9790-42-32-0.69793520850873-1.53680515249685	chr12	59130509	59131954	+	0	NA	Intergenic	L1M3|LINE|L1	-181560	NM_009216	20605	Mm.278336	NM_009216		Sstr1	SRIF-2|SS-1-R|SS1-R|SS1R|Smstr-1|Smstr1|sst1	somatostatin receptor 1	protein-coding
common_peak1-16815-9-5-0.604650905683064-1.21398586181642	chr6	47877203	47877642	+	0	NA	intron (NM_145576, intron 3 of 4)	ORR1D1|LTR|MaLR	6855	NM_001145881	232784	Mm.196782	NM_145576	ENSMUSG00000052763	Zfp212	Znf212|mKIAA3011	Zinc finger protein 212	protein-coding
common_peak1-9684-18-11-0.727956650507195-0.876666802405043	chr12	13268817	13269672	+	0	NA	Intergenic	Lx4A|LINE|L1	-6689	NM_027706	71169	Mm.177520	NM_027706	ENSMUSG00000020576	Nbas	4933425L03Rik|Nag	neuroblastoma amplified sequence	protein-coding
unique_peak2-33321-3-5--0.998945590680433-0.96108193396963	chr11	11826125	11826446	+	0	NA	Intergenic	PB1D9|SINE|Alu	-28138	NM_001190448	13195	Mm.12906	NM_016672	ENSMUSG00000020182	Ddc	Aadc	dopa decarboxylase	protein-coding
common_peak2-25679-53-73--0.0684803532130216-0.307062057408912	chr19	11911383	11912261	+	0	NA	Intergenic	Intergenic	-8308	NM_146936	258938	Mm.451671	NM_146936	ENSMUSG00000048292	Olfr1417	MOR266-2	olfactory receptor 1417	protein-coding
common_peak2-29109-12-14--0.25811461052088-0.309074325783021	chr5	123015055	123015771	+	0	NA	intron (NM_009879, intron 14 of 18)	intron (NM_009879, intron 14 of 18)	49114	NM_009879	12589	Mm.10125	NM_009879	ENSMUSG00000029469	Ift81	AW060663|Cdv-1|Cdv-1r|Cdv1	intraflagellar transport 81	protein-coding
common_peak1-16786-28-46--0.501629731856175-0.767679714496325	chr6	39573460	39574556	+	0	NA	intron (NM_139294, intron 18 of 21)	intron (NM_139294, intron 18 of 21)	31426	NM_026612	68198	Mm.29415	NM_026612	ENSMUSG00000002416	Ndufb2	1810011O01Rik|8kDa|AGGG|AI325567|CI-AGGG	NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2	protein-coding
unique_peak2-36614-15-44--1.47968834577402-3.25159220037128	chr3	103808749	103810388	+	0	NA	intron (NM_001163467, intron 18 of 18)	intron (NM_001163467, intron 18 of 18)	-37329	NR_030676	100125931	Mm.400392	NR_030676	ENSMUSG00000089998	Phtf1os	A130049A11Rik	putative homeodomain transcription factor 1, opposite strand	ncRNA
unique_peak2-38445-8-16--1.08224042330277-0.891319708951328	chr7	27859951	27860907	+	0	NA	Intergenic	Intergenic	-44545	NM_007817	13107	Mm.4515	NM_007817	ENSMUSG00000052974	Cyp2f2	Cyp2f	cytochrome P450, family 2, subfamily f, polypeptide 2	protein-coding
unique_peak2-33617-7-11--0.785871670422967-1.21681515183528	chr11	95414243	95414697	+	0	NA	Intergenic	Intergenic	34542	NM_033217	18053	Mm.283893	NM_033217	ENSMUSG00000000120	Ngfr	LNGFR|Tnfrsf16|p75|p75NGFR|p75NTR	nerve growth factor receptor (TNFR superfamily, member 16)	protein-coding
common_peak2-30699-12-12--0.0516637330534535-0.309718203022949	chr7	111157338	111158170	+	0	NA	Intergenic	L1_Mm|LINE|L1	3460	NM_147084	259088	Mm.422750	NM_147084	ENSMUSG00000066263	Olfr639	MOR12-1	olfactory receptor 639	protein-coding
unique_peak1-3842-10-0-3.35641534500877-3.31132995230379	chr2	4506424	4506921	+	0	NA	intron (NM_001177844, intron 3 of 11)	intron (NM_001177844, intron 3 of 11)	25872	NM_001177844	209630	Mm.37932	NM_172475	ENSMUSG00000026657	Frmd4a	2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|OTTMUSG00000010806|mKIAA1294	FERM domain containing 4A	protein-coding
unique_peak1-2221-27-6-2.18419102883763-4.54209996799533	chr15	74659109	74660078	+	0	NA	Intergenic	MMETn-int|LTR|ERVK	10087	NM_010416	15202	Mm.17336	NM_010416	ENSMUSG00000068600	Hemt1	1700057K19Rik|HemT	hematopoietic cell transcript 1	protein-coding
common_peak1-7879-14-6-1.09186123830004-1.16633110333236	chr1	134079880	134080607	+	0	NA	Intergenic	Intergenic	-7770	NM_001033250	213409	Mm.426321	NM_001033250	ENSMUSG00000079330	Lemd1	4930540I23Rik|6430514M23Rik|AI428128|LEMP-1	LEM domain containing 1	protein-coding
common_peak1-16013-11-20--0.883623838527147-0.876666802405043	chr5	34660591	34661107	+	0	NA	Intergenic	ORR1E|LTR|MaLR	-18190	NM_011278	19822	Mm.21281	NM_011278	ENSMUSG00000029110	Rnf4	AU018689|Gtrgeo8	ring finger protein 4	protein-coding
unique_peak1-861-59-12-2.62492428273149-12.5246833928861	chr11	20897912	20899910	+	0	NA	Intergenic	Intergenic	-92416	NM_023324	67245	Mm.28957	NM_023324	ENSMUSG00000020134	Peli1	2810468L03Rik|A930031K15Rik|AA409794|AI586297|D11Ertd676e	pellino 1	protein-coding
common_peak2-31282-12-14--0.25811461052088-0.309074325783021	chr8	72189657	72190308	+	0	NA	Intergenic	RMER15-int|LTR|ERVL	11527	NM_001177527	636741	Mm.480188	NM_001177527	ENSMUSG00000091764	Zfp964	4732490P12|EG636741|Gm7187	zinc finger protein 964	protein-coding
common_peak2-30102-14-18--0.348711353085941-0.360333814299795	chr6	135066758	135067677	+	0	NA	intron (NM_001205396, intron 1 of 3)	intron (NM_001205396, intron 1 of 3)	1084	NM_053118	93746	Mm.49902	NM_053118	ENSMUSG00000030205	Gprc5d	-	G protein-coupled receptor, family C, group 5, member D	protein-coding
common_peak1-8944-10-4-1.03448725012141-1.5150158574804	chr11	53904680	53905180	+	0	NA	Intergenic	Intergenic	-9496	NM_001136076	18452	Mm.3705	NM_011031	ENSMUSG00000018906	P4ha2	AA407196|C76437|P4hl	procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide	protein-coding
unique_peak1-4329-10-5-0.771452844287613-1.33892459842472	chr2	152670369	152671047	+	0	NA	Intergenic	CT-rich|Low_complexity|Low_complexity	-2992	NM_001141975	72119	Mm.407737	NM_028109	ENSMUSG00000027469	Tpx2	2610005B21Rik|DIL2|REPP86|p100	TPX2, microtubule-associated protein homolog (Xenopus laevis)	protein-coding
common_peak2-21781-101-143-0.0840892352941074-0.374404511353022	chr11	117567301	117569768	+	0	NA	intron (NM_198022, intron 3 of 21)	MTC|LTR|MaLR	52931	NM_198022	217351	Mm.40272	NM_198022	ENSMUSG00000025571	Tnrc6c	9930033H14Rik|mKIAA1582	trinucleotide repeat containing 6C	protein-coding
common_peak2-29803-6-11--1.01956439034085-1.32595962126035	chr6	91017740	91018480	+	0	NA	intron (NM_018815, intron 13 of 39)	intron (NM_018815, intron 13 of 39)	48710	NM_018815	54563	Mm.28162	NM_018815	ENSMUSG00000030091	Nup210	9830001L10|AI836801|Pom210|gp190|gp210	nucleoporin 210	protein-coding
common_peak2-20844-88-67-0.927949567920193-4.6338035694935	chr11	52231584	52232739	+	0	NA	Intergenic	Intergenic	22231	NM_153117	213673	Mm.291979	NM_153117	ENSMUSG00000036275	9530068E07Rik	C85061|Kct2	RIKEN cDNA 9530068E07 gene	protein-coding
unique_peak1-5811-22-3-2.6472841050874-4.58930897763324	chr6	69252361	69253301	+	0	NA	Intergenic	Intergenic	24337	NR_004434	19783		NR_004434		Rprl1	Rmrp2|Rpr|Rprh2	ribonuclease P RNA-like 1	ncRNA
common_peak2-25696-22-51--1.05315561305369-2.27205585058211	chr19	17393992	17394549	+	0	NA	Intergenic	ID4_|SINE|ID	19725	NM_001136484	14537	Mm.244825	NM_010265	ENSMUSG00000038843	Gcnt1	5630400D21Rik|B130048E03|C2 GlcNAcT|C2GNT|IGnT	glucosaminyl (N-acetyl) transferase 1, core 2	protein-coding
common_peak2-19794-18-20--0.0793982715504091-0.301029995663976	chr1	87179999	87180905	+	0	NA	Intergenic	Intergenic	314933	NM_030194	109032	Mm.335802	NM_030194	ENSMUSG00000070034	Sp110	5031415C07Rik|52kDa|5830484A20Rik|ENSMUSG00000075603|Ifi75|Ipr1	Sp110 nuclear body protein	protein-coding
common_peak1-17847-15-13-0.204809828498052-0.368541233333383	chr7	112203200	112203868	+	0	NA	Intergenic	Lx9|LINE|L1	-1228	NM_146358	258355	Mm.377452	NM_146358	ENSMUSG00000073914	Olfr677	MOR32-11	olfactory receptor 677	protein-coding
common_peak1-8715-17-27--0.589058583852566-0.604689589251113	chr11	99040680	99041449	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	-24673	NM_007719	12775	Mm.2932	NM_007719	ENSMUSG00000037944	Ccr7	CD197|Cdw197|Cmkbr7|EBI1|Ebi1h	chemokine (C-C motif) receptor 7	protein-coding
common_peak1-11296-22-33--0.440178736162935-0.541406350295756	chr15	83463974	83464894	+	0	NA	intron (NM_022723, intron 8 of 21)	intron (NM_022723, intron 8 of 21)	-38847	NM_183017	223723	Mm.46778	NM_183017	ENSMUSG00000016757	Ttll12	BC055368|D430005B17	tubulin tyrosine ligase-like family, member 12	protein-coding
unique_peak1-3181-5-4--0.0263084308932156-0.909929411522249	chr18	44542649	44543128	+	0	NA	intron (NM_027490, intron 1 of 10)	intron (NM_027490, intron 1 of 10)	2734	NM_027490	70640	Mm.87629	NM_027490	ENSMUSG00000024472	Dcp2	2410015D23Rik|5730537H01Rik|AL118268	DCP2 decapping enzyme homolog (S. cerevisiae)	protein-coding
common_peak2-25259-26-20-0.535581669379702-0.738267116931592	chr18	66470724	66471573	+	0	NA	Intergenic	Intergenic	-19656	NM_178793	320924	Mm.442049	NM_178793	ENSMUSG00000046318	Ccbe1	4933426F18Rik|9430093N24Rik|mKIAA1983	collagen and calcium binding EGF domains 1	protein-coding
unique_peak1-823-6-2-0.980435609659146-1.26211192963361	chr11	7751135	7751658	+	0	NA	Intergenic	RLTR10D|LTR|ERVK	-637470	NM_008343	16009	Mm.29254	NM_008343	ENSMUSG00000020427	Igfbp3	AI649005|IGFBP-3|IGgfbp3	insulin-like growth factor binding protein 3	protein-coding
common_peak1-19077-23-37--0.526160008934505-0.720235944639228	chr9	70503023	70504053	+	0	NA	intron (NM_172772, intron 1 of 8)	intron (NM_172772, intron 1 of 8)	1443	NM_172772	235461	Mm.170855	NM_172772	ENSMUSG00000042444	Fam63b	AI465301|B230380D07Rik|mKIAA1164	family with sequence similarity 63, member B	protein-coding
unique_peak1-6226-16-6-1.31090872021046-1.49151883326344	chr7	4099121	4099812	+	0	NA	TTS (NM_175529)	TTS (NM_175529)	2008	NM_175529	243813	Mm.347643	NM_175529	ENSMUSG00000043432	Leng9	9530024C23Rik|F630035L11Rik	leukocyte receptor cluster (LRC) member 9	protein-coding
unique_peak1-3831-9-1-2.18961340640422-2.31132995230379	chr2	174227024	174227684	+	0	NA	Intergenic	RMER19A|LTR|ERVK	-13951	NM_020580	57314	Mm.271709	NM_020580	ENSMUSG00000016253	Nelfcd	2410003I03Rik|C77797|Th1|Th1l	negative elongation factor complex member C/D, Th1l	protein-coding
common_peak2-28464-49-88--0.469449607941214-1.12735745316731	chr4	152185328	152186914	+	0	NA	Intergenic	Intergenic	114472	NR_033138	330004	Mm.291863	NM_001033414		Gm833	-	predicted gene 833	ncRNA
common_peak1-10034-72-62-0.691303889372401-2.44106047334172	chr13	14038893	14040110	+	0	NA	Intergenic	L1_Mm|LINE|L1	-7440	NM_178640	97884	Mm.21686	NM_178640	ENSMUSG00000039242	B3galnt2	A930105D20Rik|C80633|D230016N13Rik	UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	protein-coding
common_peak1-13002-30-14-1.26278481388335-2.47671208917977	chr19	4496605	4497655	+	0	NA	3' UTR (NM_027237, exon 2 of 2)	3' UTR (NM_027237, exon 2 of 2)	1453	NM_027237	69861	Mm.282978	NM_027237	ENSMUSG00000042041	2010003K11Rik	-	RIKEN cDNA 2010003K11 gene	protein-coding
common_peak1-18192-206-272-0.399880312589335-2.97043595435802	chr8	20549755	20551816	+	0	NA	Intergenic	Intergenic	-530393	NR_028428	381598	Mm.359054	NM_001024708	ENSMUSG00000071793	2610005L07Rik	2810038F24Rik|6720476A01Rik	cadherin 11 pseudogene	pseudo
unique_peak1-5023-10-0-3.35641534500877-3.31132995230379	chr4	129790090	129790618	+	0	NA	intron (NM_026441, intron 1 of 4)	intron (NM_026441, intron 1 of 4)	5554	NM_026441	67898	Mm.20818	NM_026441	ENSMUSG00000028779	Pef1	2600002E23Rik|Peflin	penta-EF hand domain containing 1	protein-coding
common_peak2-25256-16-12-0.417823924126969-0.489164546851866	chr18	65802248	65802840	+	0	NA	intron (NM_207255, intron 3 of 5)	intron (NM_207255, intron 3 of 5)	-55378	NM_177028	319888	Mm.183576	NM_177028	ENSMUSG00000046610	Oacyl	5330437I02Rik|Acyl3	O-acyltransferase like	protein-coding
common_peak1-7685-15-7-1.01216475055566-1.08658567012551	chr1	79823124	79823726	+	0	NA	intron (NM_009255, intron 1 of 8)	L1Md_A|LINE|L1	31815	NM_009255	20720	Mm.3093	NM_009255	ENSMUSG00000026249	Serpine2	B230326M24Rik|PAI-1|PI-7|PI7|PN-1|Spi4	serine (or cysteine) peptidase inhibitor, clade E, member 2	protein-coding
common_peak1-16479-25-24-0.217993715570381-0.403610417161433	chr5	137600575	137601403	+	0	NA	Intergenic	B4A|SINE|B4	-8912	NM_201373	384309	Mm.100647	NM_201373		Trim56	A130009K11Rik|Gm452|RNF109	tripartite motif-containing 56	protein-coding
unique_peak1-7103-12-0-3.64877598508764-4.21441993929574	chr9	42101802	42102469	+	0	NA	Intergenic	Intergenic	-29752	NM_172769	235293	Mm.32700	NM_172769	ENSMUSG00000032018	Sc5d	A830037K02|A830073K23Rik|Sc5dl	sterol-C5-desaturase (fungal ERG3, delta-5-desaturase) homolog (S. cerevisae)	protein-coding
common_peak2-19807-15-9-0.690236655668294-0.732381977911291	chr1	88262913	88263437	+	0	NA	intron (NR_015507, intron 1 of 1)	ID4|SINE|ID	7026	NR_015507	319336	Mm.389155	NR_015507	ENSMUSG00000073627	C130036L24Rik	ENSMUSG00000073627	RIKEN cDNA C130036L24 gene	ncRNA
unique_peak1-3151-8-1-2.00522241794757-2.05605744720049	chr18	36801467	36801983	+	0	NA	intron (NM_175375, intron 24 of 33)	AT_rich|Low_complexity|Low_complexity	-21989	NM_201256	108112	Mm.24790	NM_201256		Eif4ebp3	4e-bp3	eukaryotic translation initiation factor 4E binding protein 3	protein-coding
common_peak2-21885-20-11-0.903112283870037-1.11267835143409	chr12	113000222	113000699	+	0	NA	intron (NM_001025360, intron 1 of 15)	intron (NM_001025360, intron 1 of 15)	3381	NM_001025361	16593	Mm.278357	NM_008450	ENSMUSG00000021288	Klc1	AI874768|Kns2	kinesin light chain 1	protein-coding
common_peak1-18312-26-31--0.0721009078415378-0.304589945962371	chr8	47533154	47534137	+	0	NA	Intergenic	MLT1A0|LTR|MaLR	-22751	NM_007981	14081	Mm.210323	NM_007981	ENSMUSG00000018796	Acsl1	Acas|Acas1|Acs|FACS|Facl2	acyl-CoA synthetase long-chain family member 1	protein-coding
common_peak2-27144-21-27--0.237865656791368-0.339372226903478	chr3	27862982	27864025	+	0	NA	intron (NM_001164056, intron 2 of 26)	intron (NM_001164056, intron 2 of 26)	-19590	NM_008875	18805	Mm.212039	NM_008875	ENSMUSG00000027695	Pld1	AA536939|C85393|Pld1a|Pld1b	phospholipase D1	protein-coding
common_peak1-12077-24-39--0.528718192119646-0.694972475810969	chr17	24454618	24455582	+	0	NA	intron (NM_001031621, intron 9 of 29)	intron (NM_001031621, intron 9 of 29)	29097	NM_001031621	381072	Mm.328842	NM_001031621	ENSMUSG00000035435	Abca17	-	ATP-binding cassette, sub-family A (ABC1), member 17	protein-coding
common_peak1-14663-64-125--0.511833521791313-1.7037903148628	chr3	58576273	58577573	+	0	NA	intron (NR_045167, intron 7 of 7)	intron (NR_045167, intron 7 of 7)	80412	NR_045167	71301	Mm.254475	NR_045167	ENSMUSG00000097725	4930593A02Rik	4933440I01Rik	RIKEN cDNA 4930593A02 gene	ncRNA
common_peak2-26853-36-31-0.479321086167754-0.864252281539331	chr2	154892285	154892869	+	0	NA	intron (NM_016661, intron 3 of 9)	B3|SINE|B2	7656	NM_016661	269378	Mm.330692	NM_016661	ENSMUSG00000027597	Ahcy	AA987153|AL024110|CuBP|SAHH	S-adenosylhomocysteine hydrolase	protein-coding
common_peak2-27131-33-41--0.0609798602532319-0.303710893903464	chr3	20154465	20155322	+	0	NA	intron (NM_029706, intron 9 of 10)	intron (NM_029706, intron 9 of 10)	-12813	NM_007753	12873	Mm.1135	NM_007753	ENSMUSG00000001865	Cpa3	MC-CPA|mMC-CPA	carboxypeptidase A3, mast cell	protein-coding
common_peak1-10091-11-11--0.0762689164695427-0.301029995663976	chr13	24280467	24281014	+	0	NA	intron (NM_026825, intron 2 of 37)	intron (NM_026825, intron 2 of 37)	91919	NM_026825	68732	Mm.211047	NM_026825	ENSMUSG00000021338	Lrrc16a	1110037D04Rik|AI425970|CARMIL|D130057M20|Lrrc16	leucine rich repeat containing 16A	protein-coding
common_peak1-11546-19-26--0.352200175501782-0.416752705545949	chr16	8470756	8471653	+	0	NA	intron (NM_146247, intron 1 of 10)	intron (NM_146247, intron 1 of 10)	298	NM_146247	239706	Mm.214953	NM_146247		Mettl22	-	methyltransferase like 22	protein-coding
common_peak1-13709-26-39--0.3940290027289-0.556669751231374	chr2	30711517	30712477	+	0	NA	intron (NM_009116, intron 1 of 3)	intron (NM_009116, intron 1 of 3)	11110	NM_009116	20204	Mm.1802	NM_009116	ENSMUSG00000039476	Prrx2	Prx2|S8	paired related homeobox 2	protein-coding
common_peak1-16830-9-10--0.269818212233077-1.05503135781948	chr6	50407643	50408228	+	0	NA	Intergenic	Intergenic	-1766	NM_001163645	71720	Mm.44153	NM_027881	ENSMUSG00000029822	Osbpl3	1200014M06Rik|6720421I08Rik|A530055M08|ORP3|OSBP3	oxysterol binding protein-like 3	protein-coding
common_peak2-20305-30-47--0.415287091229283-0.618527319161325	chr1	195130855	195131554	+	0	NA	intron (NM_008484, intron 3 of 22)	intron (NM_008484, intron 3 of 22)	2767	NM_001277928	16780	Mm.435441	NM_008484	ENSMUSG00000026639	Lamb3	-	laminin, beta 3	protein-coding
unique_peak2-33825-3-8--1.58390809140159-1.39487600375387	chr12	8313441	8313843	+	0	NA	Intergenic	(CAAA)n|Simple_repeat|Simple_repeat	-4882	NM_013527	238057	Mm.271308	NM_013527	ENSMUSG00000037660	Gdf7	BMP12	growth differentiation factor 7	protein-coding
common_peak1-18664-12-20--0.743541437691122-0.625923329873571	chr8	117256396	117256935	+	0	NA	intron (NM_019573, intron 8 of 8)	intron (NM_019573, intron 8 of 8)	293113	NM_019573	80707	Mm.440420	NM_019573	ENSMUSG00000004637	Wwox	5330426P09Rik|9030416C10Rik|WOX1	WW domain-containing oxidoreductase	protein-coding
common_peak1-18492-28-50--0.619466222150033-1.0624982013315	chr8	85071305	85072364	+	0	NA	Intergenic	L1MB1|LINE|L1	-145349	NM_008357	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak2-23912-17-30--0.735899972181837-0.841847921495509	chr16	5050060	5050649	+	0	NA	promoter-TSS (NM_028720)	promoter-TSS (NM_028720)	193	NM_026666	170644	Mm.66356	NM_026666	ENSMUSG00000039473	Ubn1	1110029L11Rik|2610108L02Rik|AA673476|AW124741	ubinuclein 1	protein-coding
common_peak1-18819-9-9--0.132314688483142-1.03275496310833	chr9	4376653	4377170	+	0	NA	Intergenic	Intergenic	-6626	NM_145609	78100	Mm.206549	NM_145609	ENSMUSG00000041124	Msantd4	8430410K20Rik|Mysantd4	Myb/SANT-like DNA-binding domain containing 4 with coiled-coils	protein-coding
unique_peak1-4936-16-3-2.11826364226806-2.65002542325363	chr4	63595000	63595679	+	0	NA	Intergenic	L1M4|LINE|L1	-73021	NM_009403	21949	Mm.4664	NM_009403		Tnfsf8	CD153|CD30LG|Cd30l	tumor necrosis factor (ligand) superfamily, member 8	protein-coding
common_peak2-21782-65-84-0.0827750033394254-0.345965918761608	chr11	117654770	117655593	+	0	NA	TTS (NM_001195088)	TTS (NM_001195088)	-3793	NM_029964	77727	Mm.159981	NM_029964	ENSMUSG00000025573	6030468B19Rik	-	RIKEN cDNA 6030468B19 gene	protein-coding
unique_peak2-39188-4-7--1.02346051385325-1.09384600808989	chr8	95853061	95853469	+	0	NA	intron (NM_021456, intron 4 of 13)	(GGGA)n|Simple_repeat|Simple_repeat	7843	NM_021456	12623	Mm.22720	NM_021456	ENSMUSG00000057074	Ces1g	Ces-1|Ces1|Ses-1	carboxylesterase 1G	protein-coding
common_peak2-27680-10-21--1.10301627362853-1.16735254179725	chr3	116861468	116862064	+	0	NA	Intergenic	RMER15|LTR|ERVL	-81083	NR_038029	433646	Mm.158997	NR_038029	ENSMUSG00000028009	1700061I17Rik	-	RIKEN cDNA 1700061I17 gene	ncRNA
common_peak1-8195-9-10--0.269818212233077-1.05503135781948	chr10	128368479	128369005	+	0	NA	Intergenic	Intergenic	-2127	NM_008398	16404	Mm.179747	NM_008398	ENSMUSG00000025348	Itga7	[a]7|alpha7	integrin alpha 7	protein-coding
unique_peak2-37092-9-8-0.0196884049619079-1.03275496310833	chr3	152522892	152523471	+	0	NA	intron (NM_012028, intron 2 of 4)	intron (NM_012028, intron 2 of 4)	121990	NM_012028	26938	Mm.40915	NM_012028		St6galnac5	AI851940|Siat7e	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	protein-coding
common_peak2-27608-15-37--1.23576276288793-2.15838218998677	chr3	103967832	103969069	+	0	NA	intron (NM_001159354, intron 1 of 20)	intron (NM_001159354, intron 1 of 20)	55879	NM_133853	99470	Mm.264849	NM_133853	ENSMUSG00000052539	Magi3	4732496O19Rik|6530407C02Rik|AA407180|AI120132|mKIAA1634	membrane associated guanylate kinase, WW and PDZ domain containing 3	protein-coding
common_peak2-20687-6-7--0.434601889619698-0.97990265578305	chr10	89595579	89595998	+	0	NA	intron (NM_001128086, intron 8 of 24)	intron (NM_001128086, intron 8 of 24)	259534	NM_001128086	77531	Mm.440605	NM_181398	ENSMUSG00000058589	Anks1b	AIDA-1b|C030032C09Rik|E530015N03Rik|ENSMUSG00000078431|Gm10937|Gm1555	ankyrin repeat and sterile alpha motif domain containing 1B	protein-coding
unique_peak1-1868-17-2-2.63333383748388-3.75443312462699	chr14	55945663	55946345	+	0	NA	Intergenic	Intergenic	105160	NM_027790	71412	Mm.85484	NM_027790	ENSMUSG00000022209	Dhrs2	5430405K24Rik|Hep27	dehydrogenase/reductase member 2	protein-coding
common_peak1-15520-14-11-0.314253659636488-0.435191258261915	chr4	117210397	117211038	+	0	NA	Intergenic	Intergenic	-12212	NM_001285902	140546	Mm.235891	NM_080469	ENSMUSG00000033423	Eri3	PINT1|Prnpip1	exoribonuclease 3	protein-coding
common_peak2-31542-22-19-0.325356010200042-0.479250674391597	chr8	111369751	111370523	+	0	NA	intron (NM_007496, intron 3 of 9)	intron (NM_007496, intron 3 of 9)	-90623	NR_037295	100526511		NR_037295		Mir3108	mmu-mir-3108	microRNA 3108	ncRNA
unique_peak2-33568-10-8-0.186490343566457-1.078512453669	chr11	84887201	84887564	+	0	NA	intron (NM_001029934, intron 5 of 33)	(GA)n|Simple_repeat|Simple_repeat	66075	NM_001029934	237898	Mm.178524	NM_001029934	ENSMUSG00000000804	Usp32	2900074J03Rik|6430526O11Rik|AW045245	ubiquitin specific peptidase 32	protein-coding
common_peak2-25466-40-40-0.301423678133014-0.590471533980013	chr19	4305449	4306497	+	0	NA	exon (NM_001290818, exon 1 of 21)	exon (NM_001290818, exon 1 of 21)	249	NM_130863	110355	Mm.254144	NM_130863	ENSMUSG00000024858	Adrbk1	Adrbk-1|Bark-1|GRK2|beta ARK|betaARK1	adrenergic receptor kinase, beta 1	protein-coding
unique_peak2-38998-4-11--1.6084230145744-1.68134727924692	chr8	46617533	46617991	+	0	NA	intron (NM_172752, intron 1 of 22)	intron (NM_172752, intron 1 of 22)	24620	NM_001205219	234214	Mm.211096	NM_172752	ENSMUSG00000031626	Sorbs2	2010203O03Rik|9430041O17Rik|A530071H08|Argbp2|mKIAA0777	sorbin and SH3 domain containing 2	protein-coding
unique_peak1-3485-6-2-0.980435609659146-1.26211192963361	chr19	10603829	10604231	+	0	NA	intron (NM_172302, intron 2 of 9)	intron (NM_172302, intron 2 of 9)	4296	NM_172302	269061	Mm.490260	NM_172302	ENSMUSG00000034820	Cpsf7	5730453I16Rik|AL022757|C330017N18Rik	cleavage and polyadenylation specific factor 7	protein-coding
common_peak1-10498-23-15-0.721767504509081-0.949797625454541	chr14	25460023	25460830	+	0	NA	Intergenic	Intergenic	150523	NM_011297	20088	Mm.16775	NM_011297	ENSMUSG00000025290	Rps24	-	ribosomal protein S24	protein-coding
common_peak1-17848-21-16-0.482026424015896-0.650819692678078	chr7	112265717	112266613	+	0	NA	Intergenic	Intergenic	-3808	NM_207557	404318	Mm.377938	NM_207557	ENSMUSG00000095248	Olfr681	MOR4014	olfactory receptor 681	protein-coding
common_peak2-20586-74-74-0.487067886482727-1.4727303365515	chr10	78351707	78352848	+	0	NA	Intergenic	L1Md_F2|LINE|L1	13983	NM_207571	257734	Mm.334149	NM_207571	ENSMUSG00000062873	Olfr1355	GA_x5J8B7W4DUT-12263-11330|MOR139-6	olfactory receptor 1355	protein-coding
common_peak1-13194-29-11-1.52732757989395-3.15925062785482	chr19	21051947	21052867	+	0	NA	Intergenic	Intergenic	-23715	NM_028953	13409	Mm.219585	NM_028953	ENSMUSG00000024749	Tmc1	4933416G09Rik|Beethoven|Bth|CWEA1|dn	transmembrane channel-like gene family 1	protein-coding
unique_peak2-39043-6-15--1.4346018896197-1.16633110333236	chr8	70138646	70139208	+	0	NA	Intergenic	L1Md_A|LINE|L1	91174	NM_008674	17962	Mm.57193	NM_008674	ENSMUSG00000056426	Nat3	-	N-acetyltransferase 3	protein-coding
common_peak2-27734-45-50-0.187932683373377-0.429827778234671	chr3	126384207	126385770	+	0	NA	intron (NM_023813, intron 2 of 17)	intron (NM_023813, intron 2 of 17)	85119	NM_023813	108058	Mm.255822	NM_023813	ENSMUSG00000053819	Camk2d	2810011D23Rik|8030469K03Rik|CaMK II|[d]-CaMKII	calcium/calmodulin-dependent protein kinase II, delta	protein-coding
common_peak1-9362-16-10-0.658832023630764-0.699649909729472	chr11	97662712	97663321	+	0	NA	intron (NM_010688, intron 1 of 6)	intron (NM_010688, intron 1 of 6)	2030	NM_010688	16796	Mm.271967	NM_010688	ENSMUSG00000038366	Lasp1	AA408629|Def-4|SH3P6|Tg(Col1a1-lacZ)1Ngma	LIM and SH3 protein 1	protein-coding
unique_peak1-1012-8-0-3.00522241794757-2.70926996097583	chr11	74188324	74188679	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	10328	NM_001011851	258153	Mm.376124	NM_001011851	ENSMUSG00000058275	Olfr412	MOR127-5P	olfactory receptor 412	protein-coding
unique_peak2-36781-8-19--1.31670567693979-1.30305656033811	chr3	79179763	79180534	+	0	NA	intron (NM_001142953, intron 1 of 4)	Lx|LINE|L1	30850	NM_001142953	100233207	Mm.373801	NM_001142953	ENSMUSG00000091685	Gm17359	-	predicted gene, 17359	protein-coding
common_peak2-31168-15-16--0.075298090694683-0.301029995663976	chr8	46004902	46005717	+	0	NA	Intergenic	Intergenic	-30253	NM_001081286	14107	Mm.27365	NM_001081286	ENSMUSG00000070047	Fat1	2310038E12Rik|AU023433|Fath|mFat1	FAT tumor suppressor homolog 1 (Drosophila)	protein-coding
common_peak1-17409-20-14-0.581184188982674-0.690311289528838	chr7	4812880	4813686	+	0	NA	intron (NM_026158, intron 1 of 5)	(GAA)n|Simple_repeat|Simple_repeat	4498	NM_026158	67441	Mm.41385	NM_026158	ENSMUSG00000052605	Isoc2b	0610042E07Rik|AI553388|Isoc2	isochorismatase domain containing 2b	protein-coding
unique_peak1-3407-8-5-0.420259917226415-1.10484139239135	chr19	5429215	5429695	+	0	NA	Intergenic	Intergenic	4311	NM_001256515	107242	Mm.329658	NM_134149	ENSMUSG00000047423	AI837181	Bles03|N28173	expressed sequence AI837181	protein-coding
unique_peak1-833-7-1-1.79909083029819-1.80617997398389	chr11	8671536	8672049	+	0	NA	Intergenic	Intergenic	-107254	NM_001083587	319939	Mm.337820	NM_001083587	ENSMUSG00000020422	Tns3	BC023928|F830010I22Rik|TEM6|Tens1	tensin 3	protein-coding
common_peak2-21050-32-45--0.244469936837353-0.394172396164276	chr11	43681939	43682753	+	0	NA	intron (NM_001284381, intron 1 of 4)	intron (NM_001284381, intron 1 of 4)	-32355	NM_007416	11548	Mm.39086	NM_007416	ENSMUSG00000050541	Adra1b	[a]1b	adrenergic receptor, alpha 1b	protein-coding
common_peak1-18922-138-175-0.336239206059092-1.51212593745101	chr9	44603819	44605780	+	0	NA	intron (NM_027865, intron 3 of 8)	intron (NM_027865, intron 3 of 8)	2500	NM_027865	71687	Mm.41409	NM_027865	ENSMUSG00000002032	Tmem25	0610039J01Rik|AI429491	transmembrane protein 25	protein-coding
unique_peak2-34262-2-7--1.91745425626332-1.45399745587252	chr13	64248035	64248465	+	0	NA	intron (NM_175494, intron 1 of 4)	intron (NM_175494, intron 1 of 4)	6257	NM_175494	238673	Mm.300065	NM_175494	ENSMUSG00000044934	Zfp367	8030486J21Rik|ZFF29a|ZFF29b|Znf367	zinc finger protein 367	protein-coding
unique_peak2-33016-9-27--1.61774151565338-2.34622402919155	chr10	67126607	67127598	+	0	NA	Intergenic	Intergenic	-115399	NM_001005419	211488	Mm.297250	NM_001005419	ENSMUSG00000057134	Ado	Gm237	2-aminoethanethiol (cysteamine) dioxygenase	protein-coding
unique_peak2-39087-6-7--0.434601889619698-0.97990265578305	chr8	75108966	75109411	+	0	NA	intron (NM_144534, intron 5 of 5)	B1F1|SINE|Alu	13186	NM_144534	74166	Mm.212927	NM_144534	ENSMUSG00000031791	Tmem38a	1110001E17Rik|AI413399|TRIC-A|mg33a	transmembrane protein 38A	protein-coding
common_peak1-17188-17-9-0.896368243317676-1.09394599973099	chr6	124493509	124494191	+	0	NA	Intergenic	(TCC)n|Simple_repeat|Simple_repeat	-1473	NM_001097617	50908	Mm.219527	NM_144938	ENSMUSG00000038521	C1s1	AA959438|AI255193|AI327365|C1s|C1sa	complement component 1, s subcomponent 1	protein-coding
common_peak1-13055-47-23-1.34987892404539-4.17294976630178	chr19	5944708	5946475	+	0	NA	intron (NM_001164057, intron 13 of 17)	intron (NM_001164057, intron 13 of 17)	18615	NM_001164057	18969	Mm.209931	NM_008893	ENSMUSG00000024833	Pola2	AI573378	polymerase (DNA directed), alpha 2	protein-coding
common_peak2-20724-15-10-0.552733131918359-0.604422558181019	chr10	97313234	97313942	+	0	NA	intron (NR_033537, intron 2 of 4)	intron (NR_033537, intron 2 of 4)	116136	NR_033537	100038699	Mm.467933	NR_033537		Gm10754	ENSMUSG00000074776	predicted gene 10754	ncRNA
unique_peak1-7368-14-0-3.89921616035764-4.8164799306237	chrX	50580418	50581129	+	0	NA	Intergenic	B3A|SINE|B2	42209	NM_030167	78755	Mm.28559	NM_030167	ENSMUSG00000036022	Fam122b	4632404H22Rik|AI256344|SPACIA2	family with sequence similarity 122, member B	protein-coding
unique_peak2-37726-1-8--2.79698201165906-2.05605744720049	chr5	106384188	106384624	+	0	NA	Intergenic	Lx8|LINE|L1	78819	NM_018759	54367	Mm.248876	NM_018759	ENSMUSG00000029290	Zfp326	5730470H14Rik|ZAN75|Znf326	zinc finger protein 326	protein-coding
unique_peak1-6691-16-8-0.948338640825749-1.02063122982878	chr8	31373272	31374009	+	0	NA	Intergenic	Intergenic	-305227	NR_045856	71314	Mm.158666	NR_045856	ENSMUSG00000097044	4933433F19Rik	-	RIKEN cDNA 4933433F19 gene	ncRNA
common_peak2-27260-11-8-0.338768582809301-1.14218153353838	chr3	56261285	56261823	+	0	NA	Intergenic	Intergenic	-273931	NM_030595	26422	Mm.384353	NM_030595	ENSMUSG00000027799	Nbea	Lyst2|mKIAA1544	neurobeachin	protein-coding
unique_peak1-5708-14-4-1.57728806547028-2.4322161449009	chr6	38773447	38774234	+	0	NA	intron (NM_001294144, intron 1 of 14)	intron (NM_001294144, intron 1 of 14)	13470	NM_001136065	15258	Mm.23790	NM_010433	ENSMUSG00000061436	Hipk2	1110014O20Rik|B230339E18Rik|Stank	homeodomain interacting protein kinase 2	protein-coding
unique_peak1-6318-11-4-1.18676548936425-1.68134727924692	chr7	45061311	45061972	+	0	NA	Intergenic	Intergenic	1458263	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak2-38793-7-8--0.370834171144123-1.00793137938329	chr7	130670957	130671373	+	0	NA	Intergenic	ORR1C1|LTR|MaLR	-27202	NM_001081329	210162	Mm.135397	NM_175435	ENSMUSG00000030757	Zkscan2	9430065N20Rik|AW493225|Zfp694	zinc finger with KRAB and SCAN domains 2	protein-coding
common_peak1-18293-38-27-0.764097737240927-1.59508594240593	chr8	45527919	45529301	+	0	NA	Intergenic	Intergenic	-506952	NM_001081286	14107	Mm.27365	NM_001081286	ENSMUSG00000070047	Fat1	2310038E12Rik|AU023433|Fath|mFat1	FAT tumor suppressor homolog 1 (Drosophila)	protein-coding
common_peak1-12796-14-22--0.624345795699369-0.590343908676233	chr18	64887797	64888546	+	0	NA	Intergenic	Lx8|LINE|L1	-67517	NM_001001488	54670	Mm.270043	NM_001001488	ENSMUSG00000039529	Atp8b1	AI451886|FIC1|Ic	ATPase, class I, type 8B, member 1	protein-coding
unique_peak2-38771-1-6--2.43441193227435-1.56314192529759	chr7	127196548	127196976	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	-49178	NM_145586	233806	Mm.257952	NM_145586	ENSMUSG00000030917	Tmem159	8430420C20Rik	transmembrane protein 159	protein-coding
common_peak2-27999-7-7--0.200909169701811-0.97990265578305	chr4	45482108	45482514	+	0	NA	intron (NM_001033306, intron 2 of 5)	RSINE1|SINE|B4	-60673	NM_001009949	230125	Mm.260210	NM_001009949	ENSMUSG00000045973	Slc25a51	9130208E07Rik|D130005A03Rik|Gm138|Mcart1	solute carrier family 25, member 51	protein-coding
common_peak1-14002-45-82--0.514681406002053-1.19886391578317	chr2	104815839	104817615	+	0	NA	intron (NM_177600, intron 12 of 17)	intron (NM_177600, intron 12 of 17)	40457	NM_145380	98221	Mm.379278	NM_145380	ENSMUSG00000027170	Eif3m	Ga17|Pcid1|Tango7	eukaryotic translation initiation factor 3, subunit M	protein-coding
unique_peak2-37096-6-14--1.34149248522822-1.01572999746118	chr3	153944596	153945254	+	0	NA	Intergenic	Intergenic	48599	NM_010713	16875	Mm.15530	NM_010713	ENSMUSG00000096225	Lhx8	L3|Lhx7	LIM homeobox protein 8	protein-coding
unique_peak2-32942-18-21--0.146512467408946-0.306326795069975	chr10	39898319	39899335	+	0	NA	Intergenic	PB1|SINE|Alu	-36767	NM_001114332	72472	Mm.186778	NM_028247	ENSMUSG00000019838	Slc16a10	2610103N14Rik|9830169E08|Mct10|PRO0813|TAT1	solute carrier family 16 (monocarboxylic acid transporters), member 10	protein-coding
common_peak1-15707-29-33-0.0248272393647717-0.313805205020552	chr4	140630671	140631720	+	0	NA	intron (NM_025383, intron 1 of 7)	RSINE1|SINE|B4	3065	NM_025383	66147	Mm.21187	NM_025383	ENSMUSG00000028923	Necap2	1110005F07Rik|AA409105|C78898	NECAP endocytosis associated 2	protein-coding
unique_peak2-33893-2-5--1.50241675698448-1.08602067057793	chr12	40906836	40907257	+	0	NA	intron (NM_001033437, intron 3 of 3)	intron (NM_001033437, intron 3 of 3)	18856	NM_001033437	380755	Mm.390463	NM_001033437	ENSMUSG00000071342	Lsmem1	Gm889	leucine-rich single-pass membrane protein 1	protein-coding
unique_peak2-35979-7-7--0.200909169701811-0.97990265578305	chr19	24427467	24427903	+	0	NA	intron (NM_008846, intron 11 of 14)	intron (NM_008846, intron 11 of 14)	-72609	NM_008044	14297	Mm.7319	NM_008044	ENSMUSG00000059363	Fxn	FA|FARR|Frda|X25	frataxin	protein-coding
common_peak1-15651-17-8-1.04837133676273-1.30305656033811	chr4	135661316	135662158	+	0	NA	Intergenic	Intergenic	-38000	NM_008321	15903	Mm.110	NM_008321		Id3	Hlh462|Idb3|bHLHb25	inhibitor of DNA binding 3	protein-coding
unique_peak2-33883-7-18--1.4488366831454-1.38887104242188	chr12	33176461	33177064	+	0	NA	Intergenic	RodERV21-int|LTR|ERV1	113108	NM_001162903	72123	Mm.341352	NM_028111	ENSMUSG00000090946	Ccdc71l	2010109K11Rik|AV375874	coiled-coil domain containing 71 like	protein-coding
common_peak2-27704-19-13-0.595332404604082-0.713635438203849	chr3	122199559	122200207	+	0	NA	intron (NM_013867, intron 3 of 11)	intron (NM_013867, intron 3 of 11)	44716	NR_106117	102465764		NR_106117		Mir7657	mmu-mir-7657	microRNA mir-7657	ncRNA
common_peak2-19555-31-58--0.657404378548718-1.31742449843084	chr1	4857328	4858387	+	0	NA	intron (NM_011541, intron 2 of 9)	RMER6B|LTR|ERVK	9448	NM_001159751	21399	Mm.207263	NM_011541	ENSMUSG00000033813	Tcea1	S-II	transcription elongation factor A (SII) 1	protein-coding
unique_peak1-664-9-1-2.18961340640422-2.31132995230379	chr10	60027571	60028046	+	0	NA	intron (NR_045556, intron 7 of 68)	intron (NR_045556, intron 7 of 68)	131430	NM_001252635	22295	Mm.440327	NM_023370	ENSMUSG00000012819	Cdh23	4930542A03Rik|USH1D|ahl|ahl1|bob|bus|mdfw|nmf112|nmf181|nmf252|sals|v	cadherin 23 (otocadherin)	protein-coding
common_peak2-20843-41-54--0.0802110086759997-0.30922471743021	chr11	51755691	51757065	+	0	NA	Intergenic	Intergenic	-24755	NM_029976	52626	Mm.289456	NM_029976	ENSMUSG00000020392	Cdkn2aipnl	A430101B06Rik|AA409260|D11Ertd497e|MNCb-1520	CDKN2A interacting protein N-terminal like	protein-coding
common_peak2-24086-14-9-0.577288065470282-0.630231561310125	chr16	31597231	31597682	+	0	NA	Intergenic	Intergenic	-66073	NM_001252435	13383	Mm.382	NM_007862	ENSMUSG00000022770	Dlg1	B130052P05Rik|Dlgh1|E-dlg/SAP97|SAP-97|SAP97|mKIAA4187	discs, large homolog 1 (Drosophila)	protein-coding
unique_peak2-33985-0-6--3.64748585253182-1.56314192529759	chr12	85859792	85860165	+	0	NA	intron (NM_173756, intron 5 of 5)	intron (NM_173756, intron 5 of 5)	-50824	NM_007701	12677	Mm.4405	NM_007701	ENSMUSG00000021239	Vsx2	Chx10|Hox-10|Hox10|or	visual system homeobox 2	protein-coding
common_peak2-21337-20-19-0.16614668970383-0.348739088570342	chr11	76216953	76217783	+	0	NA	Intergenic	MLT2B4|LTR|ERVL	-3059	NM_001291161	56322	Mm.18803	NM_019818	ENSMUSG00000020843	Timm22	Tim22	translocase of inner mitochondrial membrane 22	protein-coding
unique_peak1-4758-8-3-1.00522241794757-1.39487600375387	chr3	121622305	121622684	+	0	NA	Intergenic	Intergenic	-33750	NM_172525	214137	Mm.229287	NM_172525	ENSMUSG00000039831	Arhgap29	6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1	Rho GTPase activating protein 29	protein-coding
common_peak1-16727-25-18-0.613922391901521-0.86528749982161	chr6	30400574	30401768	+	0	NA	3' UTR (NM_029742, exon 10 of 10)	3' UTR (NM_029742, exon 10 of 10)	49262	NM_029742	76788	Mm.277308	NM_029742	ENSMUSG00000029775	Klhdc10	2410127E18Rik|AI593221|mKIAA0265	kelch domain containing 10	protein-coding
unique_peak1-7253-12-5-1.06381348436648-1.78669045979184	chr9	83566282	83566853	+	0	NA	Intergenic	Intergenic	-18515	NR_046066	100039222	Mm.405596	NR_046066		Gm2109	-	predicted gene 2109	ncRNA
common_peak2-20241-41-58--0.181494344513181-0.372131646957075	chr1	182527562	182529205	+	0	NA	exon (NM_007415, exon 19 of 23)	exon (NM_007415, exon 19 of 23)	11051	NR_105869	102466761		NR_105869		Mir6904	mmu-mir-6904	microRNA mir-6904	ncRNA
common_peak1-19456-10-14--0.550475250599749-0.446472590016315	chrX	103652637	103653308	+	0	NA	intron (NM_001007580, intron 4 of 26)	intron (NM_001007580, intron 4 of 26)	27596	NM_001007580	333564	Mm.298000	NM_001007580	ENSMUSG00000033737	Fndc3c1	Fndc3c|Gm784	fibronectin type III domain containing 3C1	protein-coding
common_peak1-10614-37-14-1.6191024758773-4.20640746933198	chr14	33334360	33335966	+	0	NA	intron (NM_001081221, intron 4 of 20)	intron (NM_001081221, intron 4 of 20)	8456	NM_001081221	319955	Mm.318310	NM_177043	ENSMUSG00000054051	Ercc6	4732403I04|C130058G22Rik|CSB	excision repair cross-complementing rodent repair deficiency, complementation group 6	protein-coding
unique_peak1-1755-7-3-0.799090830298189-1.23214870625617	chr13	108338249	108338750	+	0	NA	Intergenic	Intergenic	78597	NR_045084	105120	Mm.417700	NR_045083		AI197445	-	expressed sequence AI197445	ncRNA
common_peak2-29382-8-7-0.00522241794757061-1.00793137938329	chr6	32587774	32588208	+	0	NA	Intergenic	Intergenic	-49799	NM_175750	243743	Mm.444029	NM_175750	ENSMUSG00000029765	Plxna4	9330117B14|Plxa4|mKIAA1550	plexin A4	protein-coding
common_peak1-9036-89-110-0.240550888475896-0.69888678845	chr11	62549961	62551640	+	0	NA	Intergenic	L1VL2|LINE|L1	-8205	NM_133208	170740	Mm.339982	NM_133208		Zfp287	B230333C16Rik|SKAT-2|Skat2|Znf287|mszf16|mszf74	zinc finger protein 287	protein-coding
common_peak1-19391-13-16--0.30899081061257-0.330004445983672	chrX	47912336	47912876	+	0	NA	intron (NR_026976, intron 22 of 23)	intron (NR_026976, intron 22 of 23)	75829	NR_015505	103012	Mm.482523	NR_015505		Firre	5830467J12Rik|6720401G13Rik|AW048145	functional intergenic repeating RNA element	ncRNA
common_peak2-29351-20-20-0.0957573618124323-0.321718508207528	chr5	149353006	149353884	+	0	NA	intron (NM_011908, intron 1 of 4)	intron (NM_011908, intron 1 of 4)	10919	NM_011908	24109	Mm.21846	NM_011908	ENSMUSG00000001687	Ubl3	AW108023|HCG	ubiquitin-like 3	protein-coding
common_peak1-13183-28-11-1.46799661910031-2.80071159219767	chr19	17256655	17257781	+	0	NA	intron (NM_181348, intron 11 of 19)	intron (NM_181348, intron 11 of 19)	156777	NM_001136484	14537	Mm.244825	NM_010265	ENSMUSG00000038843	Gcnt1	5630400D21Rik|B130048E03|C2 GlcNAcT|C2GNT|IGnT	glucosaminyl (N-acetyl) transferase 1, core 2	protein-coding
common_peak1-14287-27-22-0.467983994838223-0.705485015404196	chr2	157451426	157452747	+	0	NA	Intergenic	(TATG)n|Simple_repeat|Simple_repeat	-59989	NM_016916	53619	Mm.480461	NM_016916	ENSMUSG00000067787	Blcap	AI462828|Bc10	bladder cancer associated protein homolog (human)	protein-coding
unique_peak2-36105-1-11--3.2120195109379-2.83420869758413	chr2	32341690	32342117	+	0	NA	Intergenic	Intergenic	-34913	NM_146118	227731	Mm.37395	NM_146118	ENSMUSG00000026819	Slc25a25	1110030N17Rik|MCSC|mKIAA1896	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25	protein-coding
common_peak1-7856-15-35--1.15776025088666-1.87578206828671	chr1	133024890	133025450	+	0	NA	3' UTR (NM_145508, exon 3 of 3)	3' UTR (NM_145508, exon 3 of 3)	9641	NM_145508	226419	Mm.39299	NM_145508	ENSMUSG00000016526	Dyrk3	BC006704	dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3	protein-coding
common_peak1-16378-11-8-0.338768582809301-1.14218153353838	chr5	123015421	123015974	+	0	NA	intron (NM_009879, intron 14 of 18)	intron (NM_009879, intron 14 of 18)	48830	NM_009879	12589	Mm.10125	NM_009879	ENSMUSG00000029469	Ift81	AW060663|Cdv-1|Cdv-1r|Cdv1	intraflagellar transport 81	protein-coding
common_peak1-15009-58-104--0.418295582775626-1.04497728052195	chr3	110249894	110251727	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-196893	NR_024139	99890	Mm.36115	NM_178891	ENSMUSG00000049300	Prmt6	AW124876|BB233495|Hrmt1l6	protein arginine N-methyltransferase 6	protein-coding
common_peak2-23025-13-19--0.543456064249594-0.466170754204149	chr14	65261822	65262480	+	0	NA	Intergenic	Intergenic	-9217	NM_001081177	16554	Mm.23611	NM_001081177	ENSMUSG00000060012	Kif13b	5330429L19Rik|6030414C01|AI429803|C130021D12Rik|GAKIN	kinesin family member 13B	protein-coding
unique_peak2-39299-2-4--1.23938235115068-0.931118710592187	chr8	123427139	123427502	+	0	NA	Intergenic	Intergenic	167044	NM_008320	15900	Mm.334861	NM_008320	ENSMUSG00000041515	Irf8	AI893568|ICSBP|IRF-8|Icsbp1|Myls	interferon regulatory factor 8	protein-coding
unique_peak1-913-15-0-4.01216475055566-5.11750992628768	chr11	48751786	48752575	+	0	NA	Intergenic	Intergenic	7732	NM_001281472	621823	Mm.440151	NM_001281472		Psme2b	PA28b-p|PA28b2|Psme2-like|Psme2b-ps	protease (prosome, macropain) activator subunit 2B	protein-coding
common_peak2-22605-20-23--0.0968877161299631-0.305855887145851	chr13	74349601	74350261	+	0	NA	3' UTR (NM_009644, exon 11 of 11)	3' UTR (NM_009644, exon 11 of 11)	-3783	NM_177333	211446	Mm.261859	NM_177333	ENSMUSG00000034152	Exoc3	2810050O03Rik|E430013E20Rik|Sec6|Sec6l1	exocyst complex component 3	protein-coding
common_peak2-25941-21-16-0.482026424015896-0.650819692678078	chr19	46987293	46987836	+	0	NA	intron (NR_028353, intron 3 of 18)	intron (NR_028353, intron 3 of 18)	49277	NM_029810	76952	Mm.40965	NM_029810	ENSMUSG00000025041	Nt5c2	2010002I23Rik|CnII|ENSMUSG00000025039|Gm9751|Gmp|Nt5b|Pnt5|cN-II	5'-nucleotidase, cytosolic II	protein-coding
unique_peak1-2138-7-2-1.21412832957703-1.45399745587252	chr15	57705640	57706164	+	0	NA	intron (NM_024207, intron 7 of 7)	intron (NM_024207, intron 7 of 7)	18071	NM_024207	67819	Mm.289387	NM_024207	ENSMUSG00000022365	Derl1	1110021N07Rik|AI195141|AW551338|Derlin-1	Der1-like domain family, member 1	protein-coding
unique_peak2-33255-3-6--1.22133801201688-1.08602067057793	chr10	128095005	128095413	+	0	NA	Intergenic	Intergenic	-12160	NM_011772	22781	Mm.358648	NM_011772	ENSMUSG00000002578	Ikzf4	A630026H08Rik|Eos|Zfpn1a4|Znfn1a4	IKAROS family zinc finger 4	protein-coding
common_peak1-10522-10-9-0.0344872501214071-1.05503135781948	chr14	8134312	8134836	+	0	NA	Intergenic	Intergenic	30335	NM_001025085	545013	Mm.422841	NM_001025085	ENSMUSG00000072726	Gm5797	EG545013	predicted gene 5797	protein-coding
common_peak2-21979-16-22--0.405298313788951-0.440610794044987	chr12	51377552	51377992	+	0	NA	Intergenic	Intergenic	372438	NM_008858	18760	Mm.133719	NM_008858	ENSMUSG00000002688	Prkd1	PKD|PKD1|Pkcm|Prkcm	protein kinase D1	protein-coding
unique_peak1-6290-12-4-1.32684789020028-2.04196296489515	chr7	29280204	29280802	+	0	NA	Intergenic	Intergenic	-1457	NR_033605	70001	Mm.417851	NR_033605		1700028B04Rik	-	NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8 pseudogene	pseudo
common_peak1-19463-9-18--1.05831410703937-0.965105923112245	chrX	108664346	108664892	+	0	NA	Intergenic	Intergenic	-13051	NM_025949	67071	Mm.37617	NM_025949	ENSMUSG00000025665	Rps6ka6	2610524K04Rik|RSK4|S6K-alpha-6	ribosomal protein S6 kinase polypeptide 6	protein-coding
common_peak1-14880-12-11-0.0638134843664826-0.337263207250336	chr3	95894144	95894707	+	0	NA	Intergenic	B4|SINE|B4	-14025	NM_001025613	229603	Mm.272336	NM_001025613	ENSMUSG00000038495	Otud7b	2900060B22Rik|4930463P07Rik|AI462125|CEZANNE|Trabid2|Za20d1	OTU domain containing 7B	protein-coding
unique_peak2-38802-6-13--1.2419568116773-1.58711810488664	chr7	131560351	131560981	+	0	NA	Intergenic	Intergenic	291783	NR_045907	73076	Mm.417827	NR_045907	ENSMUSG00000086254	3100003L05Rik	-	RIKEN cDNA 3100003L05 gene	ncRNA
common_peak2-24841-30-37--0.0782521039517121-0.304004708442489	chr17	74489460	74490284	+	0	NA	Intergenic	B1_Mur3|SINE|Alu	-92616	NM_053188	94224	Mm.38933	NM_053188	ENSMUSG00000038541	Srd5a2	5ART2|S5AR 2	steroid 5 alpha-reductase 2	protein-coding
unique_peak1-2980-9-0-3.18961340640422-3.01029995663981	chr17	78082657	78083151	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-516684	NM_015800	50766	Mm.311912	NM_015800	ENSMUSG00000024074	Crim1	AU015004	cysteine rich transmembrane BMP regulator 1 (chordin like)	protein-coding
unique_peak1-3069-7-0-2.79909083029819-2.40823996531185	chr18	11908941	11909461	+	0	NA	Intergenic	MMERVK10C-int|LTR|ERVK	-88582	NM_022021	63955	Mm.40717	NM_022021	ENSMUSG00000040957	Cables1	Cables|ik3-1	CDK5 and Abl enzyme substrate 1	protein-coding
unique_peak2-36868-3-8--1.58390809140159-1.39487600375387	chr3	92437058	92437493	+	0	NA	Intergenic	Intergenic	-11693	NM_001166172	78382	Mm.235474	NM_001166172	ENSMUSG00000086848	Lce6a	2210420J11Rik	late cornified envelope 6A	protein-coding
unique_peak1-5392-11-6-0.701338662194009-1.32595962126035	chr5	103700795	103701394	+	0	NA	intron (NR_040699, intron 4 of 6)	intron (NR_040699, intron 4 of 6)	26954	NR_040699	74624	Mm.389662	NR_040699		4930429D17Rik	-	RIKEN cDNA 4930429D17 gene	ncRNA
unique_peak1-999-11-0-3.50869358425161-3.61235994796777	chr11	70651915	70652312	+	0	NA	Intergenic	B1F1|SINE|Alu	-6150	NM_001291143	54189	Mm.7087	NM_019400	ENSMUSG00000020817	Rabep1	Rab5ep|rabaptin-5|rabaptin-5alpha	rabaptin, RAB GTPase binding effector protein 1	protein-coding
common_peak2-22295-35-46--0.123218593215134-0.322992865635707	chr13	16011912	16012974	+	0	NA	Intergenic	Intergenic	-93865	NM_008380	16323	Mm.8042	NM_008380	ENSMUSG00000041324	Inhba	-	inhibin beta-A	protein-coding
common_peak2-32055-9-13--0.617741515653384-0.459837087125828	chr9	86467263	86467712	+	0	NA	intron (NM_027100, intron 2 of 2)	intron (NM_027100, intron 2 of 2)	1827	NM_027100	69519	Mm.272517	NM_027100	ENSMUSG00000032417	Rwdd2a	1700030C20Rik|AI848608|Rwdd2	RWD domain containing 2A	protein-coding
common_peak1-8400-14-11-0.314253659636488-0.435191258261915	chr10	68165896	68166509	+	0	NA	Intergenic	(CATA)n|Simple_repeat|Simple_repeat	-20292	NM_177794	327766	Mm.2479	NM_177794	ENSMUSG00000060044	Tmem26	3230401A06|AI195372	transmembrane protein 26	protein-coding
common_peak1-10940-17-30--0.735899972181837-0.841847921495509	chr15	12306236	12306976	+	0	NA	intron (NM_001081064, intron 18 of 23)	intron (NM_001081064, intron 18 of 23)	55355	NM_025673	66629	Mm.157655	NM_025673	ENSMUSG00000022200	Golph3	4733401N08Rik|5730410D03Rik|AW413496	golgi phosphoprotein 3	protein-coding
unique_peak2-38040-1-7--2.62705701021674-1.80617997398389	chr6	38808922	38809212	+	0	NA	intron (NM_001294144, intron 1 of 14)	L1MC|LINE|L1	17122	NM_010433	15258	Mm.23790	NM_010433	ENSMUSG00000061436	Hipk2	1110014O20Rik|B230339E18Rik|Stank	homeodomain interacting protein kinase 2	protein-coding
common_peak1-15473-28-22-0.529397163764449-0.781990829058356	chr4	107367364	107368302	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-11066	NM_019872	56296	Mm.141324	NM_019872	ENSMUSG00000028610	Dmrtb1	Dmrt6|Prp13	DMRT-like family B with proline-rich C-terminal, 1	protein-coding
unique_peak1-5971-7-0-2.79909083029819-2.40823996531185	chr6	94743766	94744209	+	0	NA	Intergenic	Intergenic	-93848	NM_008377	16206	Mm.245210	NM_008377	ENSMUSG00000030029	Lrig1	D6Bwg0781e|Img|LIG-1	leucine-rich repeats and immunoglobulin-like domains 1	protein-coding
common_peak2-24015-19-16-0.315224485411347-0.448200956659575	chr16	21793737	21794329	+	0	NA	promoter-TSS (NR_037958)	promoter-TSS (NR_037958)	-387	NR_037958	100043489	Mm.326535	NR_037957	ENSMUSG00000097290	1300002E11Rik	1500026P21Rik	RIKEN cDNA 1300002E11 gene	ncRNA
unique_peak1-1648-7-2-1.21412832957703-1.45399745587252	chr13	55691672	55692120	+	0	NA	Intergenic	L1_Mm|LINE|L1	-2600	NM_026211	67511	Mm.45233	NM_026211	ENSMUSG00000058569	Tmed9	2400003B06Rik	transmembrane emp24 protein transport domain containing 9	protein-coding
unique_peak1-1001-24-11-1.20824740204656-1.9654245668484	chr11	70747531	70748752	+	0	NA	intron (NM_001291141, intron 13 of 16)	intron (NM_001291141, intron 13 of 16)	35334	NM_172394	19069	Mm.288962	NM_172394	ENSMUSG00000040667	Nup88	Nup84|Prei2	nucleoporin 88	protein-coding
unique_peak2-36867-6-15--1.4346018896197-1.16633110333236	chr3	92281409	92281799	+	0	NA	Intergenic	Intergenic	8199	NM_009264	20753	Mm.331191	NM_009264	ENSMUSG00000050359	Sprr1a	AI528815|SPR1a|mSPRR1A	small proline-rich protein 1A	protein-coding
unique_peak1-5365-8-1-2.00522241794757-2.05605744720049	chr5	93020184	93020690	+	0	NA	TTS (NM_001033478)	TTS (NM_001033478)	-11640	NM_175096	52331	Mm.21965	NM_175096	ENSMUSG00000047963	Stbd1	D530019K15Rik|D5Ertd593e	starch binding domain 1	protein-coding
common_peak1-11619-31-42--0.201026083888975-0.369793428364259	chr16	18811750	18812988	+	0	NA	promoter-TSS (NM_009862)	promoter-TSS (NM_009862)	-18	NR_028403	22230	Mm.237594	NM_011672	ENSMUSG00000005262	Ufd1l	Ufd1	ubiquitin fusion degradation 1 like	protein-coding
common_peak2-29891-170-227-0.325382485485394-1.77776452666975	chr6	113075897	113078766	+	0	NA	intron (NM_028385, intron 15 of 21)	intron (NM_028385, intron 15 of 21)	49698	NM_028385	72895	Mm.367159	NM_028385	ENSMUSG00000034269	Setd5	2900045N06Rik|C330007C20|C85544|mKIAA1757	SET domain containing 5	protein-coding
unique_peak2-34392-1-4--1.94898510510411-1.10720996964787	chr14	26066778	26067141	+	0	NA	Intergenic	Intergenic	-104232	NR_045718	75862	Mm.109191	NR_045718		4930572O13Rik	-	RIKEN cDNA 4930572O13 gene	ncRNA
unique_peak1-1203-12-7-0.648775985087639-0.697979855752659	chr11	104624829	104625524	+	0	NA	Intergenic	Intergenic	155862	NM_016780	16416	Mm.87150	NM_016780	ENSMUSG00000020689	Itgb3	CD61|GP3A|INGRB3	integrin beta 3	protein-coding
unique_peak1-879-9-4-0.867685311516858-1.36011389749466	chr11	31739952	31740501	+	0	NA	Intergenic	Intergenic	-15679	NR_102312	414116	Mm.150222	NR_102310	ENSMUSG00000085772	D630024D03Rik	-	RIKEN cDNA D630024D03 gene	ncRNA
unique_peak2-32750-7-11--0.785871670422967-1.21681515183528	chr1	167392400	167392983	+	0	NA	intron (NM_027430, intron 1 of 4)	intron (NM_027430, intron 1 of 4)	1352	NM_027430	70456	Mm.195625	NM_027430	ENSMUSG00000026568	Mpc2	0610006C01Rik|2010002I07Rik|2610205H19Rik|AA108335|Brp44|ESTM43	mitochondrial pyruvate carrier 2	protein-coding
common_peak2-24936-42-79--0.579598767020179-1.32755441273623	chr17	94748846	94750586	+	0	NA	Intergenic	L1_Mus1|LINE|L1	399516	NM_176917	76781	Mm.139146	NM_176917	ENSMUSG00000055660	Mettl4	2410198H06Rik|A730091E08Rik|AV296509|HsT661	methyltransferase like 4	protein-coding
unique_peak1-6385-12-1-2.64877598508764-3.36932189928148	chr7	75557914	75558430	+	0	NA	Intergenic	Intergenic	-4138	NR_046208	71244	Mm.410787	NR_046208		4933436H12Rik	-	RIKEN cDNA 4933436H12 gene	ncRNA
common_peak2-23800-10-22--1.16714661104824-1.30248952876293	chr15	99850546	99851190	+	0	NA	Intergenic	Intergenic	-18227	NM_001159361	239667	Mm.243658	NM_172819	ENSMUSG00000023026	Dip2b	4932422C22|AI317237|AI854602|mKIAA1463	DIP2 disco-interacting protein 2 homolog B (Drosophila)	protein-coding
common_peak1-11294-35-16-1.34390741721217-3.08659436536937	chr15	83445417	83446395	+	0	NA	intron (NM_022723, intron 15 of 21)	intron (NM_022723, intron 15 of 21)	-20319	NM_183017	223723	Mm.46778	NM_183017	ENSMUSG00000016757	Ttll12	BC055368|D430005B17	tubulin tyrosine ligase-like family, member 12	protein-coding
common_peak2-29998-12-7-0.648775985087639-0.697979855752659	chr6	124493557	124493973	+	0	NA	Intergenic	B3|SINE|B2	-1388	NM_001097617	50908	Mm.219527	NM_144938	ENSMUSG00000038521	C1s1	AA959438|AI255193|AI327365|C1s|C1sa	complement component 1, s subcomponent 1	protein-coding
common_peak1-7855-49-24-1.36242763325046-4.39778260092679	chr1	132476702	132477746	+	0	NA	intron (NM_009581, intron 10 of 11)	L1_Rod|LINE|L1	48959	NM_009581	22789	Mm.4644	NM_009581	ENSMUSG00000042554	Zp3r	AV264399|SP56	zona pellucida 3 receptor	protein-coding
common_peak1-18118-16-25--0.58217607587303-0.633951497070961	chr8	4238638	4239466	+	0	NA	intron (NM_001291777, intron 1 of 11)	CpG	312	NM_001164172	26400	Mm.3906	NM_011944	ENSMUSG00000002948	Map2k7	5930412N11Rik|JNKK 2|Jnkk2|MAPKK 7|MEK 7|Mapkk7|Mek7|Mkk7|Prkmk7|sek2	mitogen-activated protein kinase kinase 7	protein-coding
unique_peak2-34182-5-7--0.704380336005853-1.01466476204226	chr13	35395384	35395802	+	0	NA	Intergenic	MTC-int|LTR|MaLR	122101	NR_045616	100503727	Mm.32214	NR_045616		1700011B04Rik	-	RIKEN cDNA 1700011B04 gene	ncRNA
common_peak1-8828-43-105--0.945357269039496-3.75145640147994	chr11	23255617	23257080	+	0	NA	intron (NM_001190401, intron 10 of 79)	intron (NM_001190401, intron 10 of 79)	49453	NM_001190401	17847	Mm.119155	NM_001190401	ENSMUSG00000056342	Usp34	A530081C03Rik|Murr2	ubiquitin specific peptidase 34	protein-coding
common_peak2-24504-26-47--0.657063408562694-1.12279078807801	chr17	26138675	26139385	+	0	NA	intron (NM_153140, intron 5 of 11)	MERVL_2A-int|LTR|ERVL	19775	NM_153140	215445	Mm.41191	NM_153140	ENSMUSG00000037098	Rab11fip3	Cart1|D030060O14Rik|Rab11-FIP3|mKIAA0665	RAB11 family interacting protein 3 (class II)	protein-coding
unique_peak1-5079-17-8-1.04837133676273-1.30305656033811	chr4	141598976	141599872	+	0	NA	intron (NM_145402, intron 1 of 2)	intron (NM_145402, intron 1 of 2)	-31858	NM_177868	329977	Mm.252019	NM_028429	ENSMUSG00000051435	Fhad1	2900090M10Rik|B230311F11	forkhead-associated (FHA) phosphopeptide binding domain 1	protein-coding
unique_peak1-6948-11-3-1.50869358425161-1.95434855131066	chr8	111203190	111203691	+	0	NA	Intergenic	Intergenic	-35104	NM_007496	11906	Mm.416972	NM_007496	ENSMUSG00000038872	Zfhx3	A230102L03Rik|Atbf1|WBP9|mKIAA4228	zinc finger homeobox 3	protein-coding
common_peak1-15385-45-54-0.0789983118202118-0.332057628060234	chr4	66827295	66828757	+	0	NA	Intergenic	ORR1E|LTR|MaLR	339181	NM_021297	21898	Mm.38049	NM_021297	ENSMUSG00000039005	Tlr4	Lps|Ly87|Ran/M1|Rasl2-8	toll-like receptor 4	protein-coding
common_peak2-31964-33-66--0.734751627932243-1.70008721686218	chr9	66591728	66593081	+	0	NA	intron (NM_178396, intron 2 of 10)	intron (NM_178396, intron 2 of 10)	30911	NM_178396	76459	Mm.277921	NM_178396	ENSMUSG00000032373	Car12	2310047E01Rik|AI314958|Ca12	carbonic anyhydrase 12	protein-coding
common_peak1-8112-13-32--1.26592208872068-1.87214134458702	chr1	183680341	183680970	+	0	NA	Intergenic	Intergenic	91877	NM_133815	98386	Mm.4538	NM_133815	ENSMUSG00000004880	Lbr	AI505894|ic	lamin B receptor	protein-coding
unique_peak1-5534-7-3-0.799090830298189-1.23214870625617	chr5	140206127	140206649	+	0	NA	intron (NM_174850, intron 1 of 16)	B4|SINE|B4	5899	NM_174850	231830	Mm.240510	NM_174850	ENSMUSG00000036718	Micall2	A930021H16Rik|JRAB|MICAL-L2|mFLJ00139	MICAL-like 2	protein-coding
common_peak1-17468-17-20--0.174021084573723-0.306598483909156	chr7	19750507	19751062	+	0	NA	intron (NM_001080815, intron 1 of 13)	intron (NM_001080815, intron 1 of 13)	692	NM_001080815	381853	Mm.333633	NM_001080815	ENSMUSG00000030406	Gipr	GIP-R|Gm1081|Gm160	gastric inhibitory polypeptide receptor	protein-coding
unique_peak1-2155-8-1-2.00522241794757-2.05605744720049	chr15	59290255	59290779	+	0	NA	intron (NM_026746, intron 4 of 6)	intron (NM_026746, intron 4 of 6)	84764	NM_001164604	68501	Mm.27762	NM_026746	ENSMUSG00000059586	Nsmce2	1110014D18Rik|AI661537	non-SMC element 2 homolog (MMS21, S. cerevisiae)	protein-coding
common_peak2-32256-7-7--0.200909169701811-0.97990265578305	chrX	8084491	8084808	+	0	NA	Intergenic	ORR1B1|LTR|MaLR	17431	NM_001126491	546263	Mm.475615	NM_001126491	ENSMUSG00000079704	Gm14459	OTTMUSG00000016698	predicted gene 14459	protein-coding
common_peak2-29928-10-8-0.186490343566457-1.078512453669	chr6	115519067	115519506	+	0	NA	intron (NM_199033, intron 8 of 11)	intron (NM_199033, intron 8 of 11)	23308	NM_001101431	70291	Mm.133694	NM_001101431		Mkrn2os	2510049J12Rik	makorin, ring finger protein 2, opposite strand	protein-coding
unique_peak1-5874-8-1-2.00522241794757-2.05605744720049	chr6	86159683	86160148	+	0	NA	intron (NM_031199, intron 1 of 5)	intron (NM_031199, intron 1 of 5)	14670	NM_031199	21802	Mm.137222	NM_031199	ENSMUSG00000029999	Tgfa	wa-1|wa1	transforming growth factor alpha	protein-coding
unique_peak2-32996-7-21--1.66034078833911-1.89173646618541	chr10	60831870	60832978	+	0	NA	intron (NM_013753, intron 1 of 19)	intron (NM_013753, intron 1 of 19)	13847	NM_013753	27355	Mm.269699	NM_013753	ENSMUSG00000020092	Pald1	MMPAL|Pald|mKIAA1274	phosphatase domain containing, paladin 1	protein-coding
common_peak2-30180-45-37-0.612430511901287-1.31742449843083	chr7	127008406	127009271	+	0	NA	intron (NM_001163703, intron 1 of 2)	intron (NM_001163703, intron 1 of 2)	30134	NM_173408	233805	Mm.31539	NM_173408	ENSMUSG00000048787	Dcun1d3	1700020A13Rik|BC030335	DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)	protein-coding
common_peak2-19902-12-18--0.599151528355947-0.476916024233333	chr1	111864247	111864887	+	0	NA	Intergenic	Intergenic	-15747	NM_172853	241201	Mm.213407	NM_172853	ENSMUSG00000026312	Cdh7	9330156F07Rik|CDH7L1	cadherin 7, type 2	protein-coding
common_peak2-29825-10-11--0.228547155712387-0.31137425193576	chr6	91737072	91737663	+	0	NA	intron (NM_001159507, intron 3 of 23)	intron (NM_001159507, intron 3 of 23)	20020	NM_001159507	243547	Mm.333264	NM_001033353	ENSMUSG00000030098	Grip2	-	glutamate receptor interacting protein 2	protein-coding
unique_peak1-2052-8-2-1.42025991722641-1.65811743852845	chr15	27486727	27487202	+	0	NA	exon (NM_020332, exon 4 of 12)	exon (NM_020332, exon 4 of 12)	-14285	NR_106065	102466808		NR_106065		Mir7117	mmu-mir-7117	microRNA mir-7117	ncRNA
common_peak2-22850-8-16--1.08224042330277-0.891319708951328	chr14	25459475	25460111	+	0	NA	Intergenic	Intergenic	149890	NM_011297	20088	Mm.16775	NM_011297	ENSMUSG00000025290	Rps24	-	ribosomal protein S24	protein-coding
common_peak2-28374-6-10--0.894033508256995-1.21398586181642	chr4	137928857	137929327	+	0	NA	Intergenic	Intergenic	-5222	NM_028176	72269	Mm.46182	NM_028176	ENSMUSG00000028755	Cda	2210401N16Rik	cytidine deaminase	protein-coding
unique_peak2-35693-10-18--0.891512168434816-0.804350088532826	chr18	24120582	24121422	+	0	NA	3' UTR (NM_027007, exon 4 of 4)	3' UTR (NM_027007, exon 4 of 4)	7813	NM_027007	69256	Mm.218343	NM_027007	ENSMUSG00000024276	Zfp397	2810411K16Rik|6720480F11Rik|AI461664	zinc finger protein 397	protein-coding
common_peak2-25290-22-56--1.18560590907734-2.94420284442398	chr18	69925372	69926654	+	0	NA	Intergenic	Intergenic	-159200	NM_201362	381175	Mm.266831	NM_201362	ENSMUSG00000038903	Ccdc68	BC046343	coiled-coil domain containing 68	protein-coding
unique_peak1-4439-16-4-1.7963355473807-2.18192634393779	chr2	170138952	170139658	+	0	NA	Intergenic	L1M4|LINE|L1	-42556	NR_040610	73303	Mm.443297	NR_040610	ENSMUSG00000086999	Bcas1os2	1700040N02Rik	breast carcinoma amplified sequence 1, opposite strand 2	ncRNA
unique_peak1-4189-10-2-1.77145284428761-2.09384600808989	chr2	117614672	117615238	+	0	NA	Intergenic	Intergenic	-32709	NR_040631	73938	Mm.399107	NR_040631	ENSMUSG00000086221	4930412B13Rik	-	RIKEN cDNA 4930412B13 gene	ncRNA
common_peak1-8025-20-34--0.641208232353773-0.863762398024911	chr1	169733126	169734175	+	0	NA	intron (NM_033652, intron 3 of 7)	CT-rich|Low_complexity|Low_complexity	113961	NM_033652	110648	Mm.330081	NM_033652	ENSMUSG00000026686	Lmx1a	Lmx1.1|dr|dreher|sst	LIM homeobox transcription factor 1 alpha	protein-coding
common_peak1-10774-19-26--0.352200175501782-0.416752705545949	chr14	73237795	73238551	+	0	NA	Intergenic	Intergenic	-128363	NM_207636	319448	Mm.205421	NM_207636	ENSMUSG00000033487	Fndc3a	1700094E19Rik|D14Ertd453e|F730017H24Rik|Fndc3|sys	fibronectin type III domain containing 3A	protein-coding
common_peak1-16311-46-61--0.0562003671380733-0.302824621390623	chr5	114774468	114775284	+	0	NA	intron (NM_001164573, intron 5 of 30)	(CA)n|Simple_repeat|Simple_repeat	9926	NM_001164573	231646	Mm.238285	NM_146163	ENSMUSG00000066952	Myo1h	4631401O15Rik	myosin 1H	protein-coding
unique_peak1-4652-10-4-1.03448725012141-1.5150158574804	chr3	89315335	89315707	+	0	NA	Intergenic	Intergenic	-8565	NM_080466	140493	Mm.120250	NM_080466		Kcnn3	KCa2.3|SK3|SKCA3	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	protein-coding
common_peak2-32271-33-62--0.645942360974388-1.33955643568472	chrX	13070485	13071526	+	0	NA	Intergenic	Intergenic	26207	NM_173415	236690	Mm.90233	NM_173415	ENSMUSG00000051228	Nyx	CLNP|CSNB1|CSNB4|nob	nyctalopin	protein-coding
common_peak1-19326-9-9--0.132314688483142-1.03275496310833	chr9	124312006	124312463	+	0	NA	Intergenic	Intergenic	275952	NM_009917	12774	Mm.14302	NM_009917	ENSMUSG00000079227	Ccr5	AM4-7|CD195|Cmkbr5	chemokine (C-C motif) receptor 5	protein-coding
common_peak2-32364-13-15--0.221527969362231-0.308519316180257	chrX	100774290	100774936	+	0	NA	intron (NR_028380, intron 10 of 10)	intron (NR_028380, intron 10 of 10)	-6120	NR_030418	751546		NR_030418	miRBase:MI0004125	Mir374b	Mir374|Mirn374|mmu-mir-374|mmu-mir-374b	microRNA 374b	ncRNA
unique_peak1-397-9-2-1.60465090568306-1.87199725847353	chr1	154149831	154150344	+	0	NA	Intergenic	Intergenic	83725	NM_025677	66637	Mm.379120	NM_025677	ENSMUSG00000014980	Tsen15	5730449L18Rik|AL023077|Sen15	tRNA splicing endonuclease 15 homolog (S. cerevisiae)	protein-coding
common_peak1-14888-12-6-0.841421063030034-1.58711810488664	chr3	96134145	96134674	+	0	NA	Intergenic	Intergenic	-36517	NM_010186	14129	Mm.150	NM_010186	ENSMUSG00000015947	Fcgr1	AI323638|AV092959|CD64|FcgammaRI|IGGHAFC	Fc receptor, IgG, high affinity I	protein-coding
common_peak1-7596-13-30--1.17572427974911-1.59386218057211	chr1	57969614	57970328	+	0	NA	intron (NM_144882, intron 9 of 13)	intron (NM_144882, intron 9 of 13)	56397	NR_027630	51960	Mm.339711	NM_030211	ENSMUSG00000054770	Kctd18	4932411A20Rik|6530404F10Rik	potassium channel tetramerisation domain containing 18	protein-coding
unique_peak2-37675-6-7--0.434601889619698-0.97990265578305	chr5	96219828	96220199	+	0	NA	intron (NM_001122668, intron 1 of 3).2	intron (NM_001122668, intron 1 of 3).2	-1645	NM_001167793	100041354	Mm.422721	NM_001122678	ENSMUSG00000079423	Gm3286	-	predicted gene 3286	protein-coding
unique_peak1-7171-9-2-1.60465090568306-1.87199725847353	chr9	60945849	60946361	+	0	NA	Intergenic	Intergenic	7088	NR_105026	66785	Mm.158134	NR_105026		4933433G08Rik	-	RIKEN cDNA 4933433G08 gene	ncRNA
unique_peak1-7055-16-0-4.11826364226806-5.41853992195166	chr9	99712498	99713153	+	0	NA	Intergenic	MLT1B|LTR|MaLR	63764	NM_011440	20669	Mm.261595	NM_011440	ENSMUSG00000053747	Sox14	-	SRY (sex determining region Y)-box 14	protein-coding
unique_peak2-36927-0-5--3.42509343119537-1.32905871926422	chr3	101772366	101772699	+	0	NA	Intergenic	B3|SINE|B2	-41536	NM_178777	18072	Mm.137286	NM_178777	ENSMUSG00000048540	Nhlh2	6230401I09Rik|Hen2|NSCL2|Nscl-2|bHLHa34	nescient helix loop helix 2	protein-coding
common_peak2-23899-12-15--0.351224014912361-0.332077462497413	chr16	4419821	4420526	+	0	NA	5' UTR (NM_009624, exon 1 of 11)	5' UTR (NM_009624, exon 1 of 11)	325	NM_001291910	11515	Mm.439750	NM_009624	ENSMUSG00000005580	Adcy9	ACtp10|AW125421|D16Wsu65e|mKIAA0520	adenylate cyclase 9	protein-coding
common_peak2-30712-24-13-0.985854980710112-1.52081014994907	chr7	113260008	113260689	+	0	NA	Intergenic	Intergenic	-37686	NR_030719	668108	Mm.429088	NR_030719		Gm8979	EG668108|Gm21884	very large inducible GTPase 1 pseudogene	pseudo
common_peak2-21476-16-12-0.417823924126969-0.489164546851866	chr11	87986942	87987495	+	0	NA	intron (NM_001172099, intron 1 of 9)	intron (NM_001172099, intron 1 of 9)	4151	NM_001172099	103841	Mm.374846	NM_198013	ENSMUSG00000018378	Cuedc1	AI841487|C330016O16Rik	CUE domain containing 1	protein-coding
common_peak1-17145-41-37-0.453221191405075-0.852626677849445	chr6	116649608	116651310	+	0	NA	intron (NM_178768, intron 2 of 4)	intron (NM_178768, intron 2 of 4)	16317	NM_178768	319776	Mm.133120	NM_178768	ENSMUSG00000048108	Tmem72	C230095G01Rik	transmembrane protein 72	protein-coding
unique_peak1-6812-7-0-2.79909083029819-2.40823996531185	chr8	72806979	72807424	+	0	NA	intron (NM_001146153, intron 1 of 9)	CpG	303	NM_001146153	26558	Mm.388127	NM_011984	ENSMUSG00000003573	Homer3	AW146114	homer homolog 3 (Drosophila)	protein-coding
unique_peak2-37311-5-10--1.16381195464315-1.33892459842472	chr4	124802584	124802941	+	0	NA	intron (NM_153159, intron 2 of 5)	intron (NM_153159, intron 2 of 5)	2363	NM_153159	230738	Mm.402	NM_153159	ENSMUSG00000042677	Zc3h12a	BC036563|MCPIP|Mcpip1	zinc finger CCCH type containing 12A	protein-coding
common_peak1-11989-29-17-0.942365079172799-1.68242911687175	chr17	12297338	12298596	+	0	NA	Intergenic	Intergenic	-14183	NM_026644	68262	Mm.258300	NM_026644	ENSMUSG00000023827	Agpat4	1500003P24Rik	1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)	protein-coding
unique_peak2-36749-11-9-0.186765489364251-0.344532117358383	chr3	60310790	60311277	+	0	NA	intron (NM_001253709, intron 1 of 8)	intron (NM_001253709, intron 1 of 8)	5859	NM_001253708	56758	Mm.255723	NM_020007	ENSMUSG00000027763	Mbnl1	Mbnl|mKIAA0428	muscleblind-like 1 (Drosophila)	protein-coding
unique_peak1-1687-16-9-0.796335547380699-0.844317084070804	chr13	74617589	74618169	+	0	NA	3' UTR (NM_146231, exon 4 of 4)	3' UTR (NM_146231, exon 4 of 4)	13519	NM_146231	235956	Mm.296909	NM_146231		Zfp825	-	zinc finger protein 825	protein-coding
common_peak2-31583-28-17-0.88303411837915-1.43262124146305	chr8	120416173	120417053	+	0	NA	Intergenic	ID_B1|SINE|B4	-90784	NM_026758	68533	Mm.181836	NM_026758	ENSMUSG00000031843	Mphosph6	1110001M01Rik|AA536809|C86426	M phase phosphoprotein 6	protein-coding
common_peak2-24868-48-99--0.67292903853991-2.05279581805583	chr17	79894924	79896278	+	0	NA	Intergenic	MTD|LTR|MaLR	14225	NR_033462	100038718	Mm.414347	NR_033462		Gm10494	ENSMUSG00000073373	predicted gene 10494	ncRNA
unique_peak2-39621-3-16--2.50144593120962-3.03427613622886	chr9	92541931	92542590	+	0	NA	Intergenic	IAPLTR1a_Mm|LTR|ERVK	-71294	NR_040770	331003	Mm.50805	NR_040770		4933400C23Rik	4933400C23	RIKEN cDNA 4933400C23 gene	ncRNA
common_peak1-10243-14-12-0.198776442216552-0.373562084705529	chr13	54564889	54565501	+	0	NA	exon (NM_028597, exon 4 of 6)	exon (NM_028597, exon 4 of 6)	5006	NM_028597	73666	Mm.292487	NM_028597	ENSMUSG00000025872	Thoc3	2410044K02Rik|AL033344	THO complex 3	protein-coding
common_peak2-30459-21-22-0.0459273092092225-0.319918318021793	chr7	45628293	45628998	+	0	NA	Intergenic	Intergenic	891259	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak1-13734-28-37--0.194968393622123-0.350690697593776	chr2	32342813	32343854	+	0	NA	Intergenic	Intergenic	-36343	NM_146118	227731	Mm.37395	NM_146118	ENSMUSG00000026819	Slc25a25	1110030N17Rik|MCSC|mKIAA1896	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25	protein-coding
common_peak1-10481-31-29-0.318348075204605-0.512115693271959	chr13	114387448	114388478	+	0	NA	intron (NM_130796, intron 1 of 1)	intron (NM_130796, intron 1 of 1)	20809	NM_130796	170625	Mm.33721	NM_130796	ENSMUSG00000042364	Snx18	Snag1	sorting nexin 18	protein-coding
common_peak2-23100-11-14--0.398197011356905-0.379391706698377	chr14	76876169	76877079	+	0	NA	intron (NM_207652, intron 1 of 2)	intron (NM_207652, intron 1 of 2)	-11619	NM_001177751	21807	Mm.153272	NM_009366	ENSMUSG00000022010	Tsc22d1	AA589566|AW105905|Egr5|TSC-22|Tgfb1i4|Tsc|Tsc22	TSC22 domain family, member 1	protein-coding
common_peak2-23988-18-38--0.972483067633897-1.53432270224293	chr16	18248203	18249442	+	0	NA	promoter-TSS (NM_001080999)	promoter-TSS (NM_001080999)	-35	NM_011239	19385	Mm.235287	NM_011239		Ranbp1	Htf9a	RAN binding protein 1	protein-coding
common_peak2-31830-15-8-0.842239749113344-0.891319708951327	chr9	44407657	44408045	+	0	NA	Intergenic	Intergenic	-5124	NM_001110826	13209	Mm.267061	NM_007841	ENSMUSG00000032097	Ddx6	1110001P04Rik|E230023J21Rik|HLR2|mRCK/P54|p54|rck	DEAD (Asp-Glu-Ala-Asp) box polypeptide 6	protein-coding
common_peak1-11328-12-10-0.189344366450341-0.386243247519795	chr15	85675211	85675978	+	0	NA	intron (NM_001033337, intron 7 of 13)	intron (NM_001033337, intron 7 of 13)	12860	NM_001033337	239570	Mm.151748	NM_001033337	ENSMUSG00000035944	Ttc38	9030019H09	tetratricopeptide repeat domain 38	protein-coding
common_peak1-17073-16-11-0.533301141546906-0.58239619684445	chr6	108477094	108477777	+	0	NA	intron (NM_010585, intron 60 of 61)	intron (NM_010585, intron 60 of 61)	37698	NR_106121	102465766		NR_106121		Mir7661	mmu-mir-7661	microRNA mir-7661	ncRNA
unique_peak2-32590-5-5--0.289342836727009-0.909929411522249	chr1	89771929	89772272	+	0	NA	intron (NM_177646, intron 1 of 29)	ID_B1|SINE|B4	22238	NM_177646	227333	Mm.277217	NM_177646	ENSMUSG00000070738	Dgkd	AI841987|D330025K09|DGKdelta|dgkd-2	diacylglycerol kinase, delta	protein-coding
common_peak1-7526-9-7-0.18961340640422-1.05908390183068	chr1	33670403	33670911	+	0	NA	intron (NM_008922, intron 7 of 13)	intron (NM_008922, intron 7 of 13)	55982	NM_008922	19076	Mm.27705	NM_008922	ENSMUSG00000026134	Prim2	AI323589	DNA primase, p58 subunit	protein-coding
common_peak2-23844-100-85-0.810507020108692-4.3630039984018	chr15	102016431	102018665	+	0	NA	exon (NM_144942, exon 6 of 15)	exon (NM_144942, exon 6 of 15)	1926	NM_144942	246277	Mm.296382	NM_144942	ENSMUSG00000023044	Csad	Csd	cysteine sulfinic acid decarboxylase	protein-coding
common_peak1-15310-36-46--0.0752677655098832-0.303416277109641	chr4	44756303	44757358	+	0	NA	Intergenic	B1F|SINE|Alu	-12601	NM_138590	319885	Mm.331576	NM_138590	ENSMUSG00000035649	Zcchc7	4930572I07Rik|D4Wsu132e	zinc finger, CCHC domain containing 7	protein-coding
unique_peak2-35064-5-7--0.704380336005853-1.01466476204226	chr16	13367528	13367904	+	0	NA	intron (NM_153588, intron 1 of 14)	intron (NM_153588, intron 1 of 14)	9202	NM_153588	239719	Mm.270643	NM_153588	ENSMUSG00000009569	Mkl2	ENSMUSG00000075401|Gt4-1|MRTF-B|Mrtfb|mKIAA1243	MKL/myocardin-like 2	protein-coding
common_peak1-14180-48-60-0.0401898136719279-0.316920393882012	chr2	144164915	144166462	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-7872	NM_026924	107586	Mm.252750	NM_026924	ENSMUSG00000037279	Ovol2	1700108N11Rik|1810007D21Rik|M-OVO|M-OVO-A|M-OVO-B|MOVO|Ovo2|Zfp339|movo2	ovo-like 2 (Drosophila)	protein-coding
unique_peak1-2293-11-4-1.18676548936425-1.68134727924692	chr15	80189250	80189767	+	0	NA	exon (NM_001044308, exon 9 of 37)	exon (NM_001044308, exon 9 of 37)	71840	NM_001044308	239556	Mm.291058	NM_001044308	ENSMUSG00000022416	Cacna1i	Ca(V)3.3	calcium channel, voltage-dependent, alpha 1I subunit	protein-coding
unique_peak2-32786-4-8--1.19338551529556-1.21878474469819	chr1	180403752	180404187	+	0	NA	intron (NM_026626, intron 3 of 6)	intron (NM_026626, intron 3 of 6)	-55287	NM_001161665	269152	Mm.129727	NM_177724	ENSMUSG00000026494	Kif26b	4832420M10|BC056349|D230039L06Rik	kinesin family member 26B	protein-coding
common_peak2-31792-15-13-0.204809828498052-0.368541233333383	chr9	35095089	35095779	+	0	NA	Intergenic	Intergenic	6744	NR_040715	71133	Mm.158577	NR_040715		4933422A05Rik	-	RIKEN cDNA 4933422A05 gene	ncRNA
common_peak1-10076-17-23--0.366666162516118-0.383878263347744	chr13	23544417	23545262	+	0	NA	Intergenic	Intergenic	12931	NM_013483	12231	Mm.1420	NM_013483	ENSMUSG00000000706	Btn1a1	Btn	butyrophilin, subfamily 1, member A1	protein-coding
unique_peak2-35844-2-11--2.50241675698448-2.32232533660526	chr18	73815008	73815399	+	0	NA	intron (NM_008540, intron 8 of 11)	B1_Mur2|SINE|Alu	48192	NM_008540	17128	Mm.100399	NM_008540	ENSMUSG00000024515	Smad4	AW743858|D18Wsu70e|DPC4|Madh4	SMAD family member 4	protein-coding
unique_peak2-33720-6-5--0.0195643903408542-0.947717972411649	chr11	113732801	113733158	+	0	NA	intron (NM_172800, intron 8 of 44)	intron (NM_172800, intron 8 of 44)	-119850	NM_001163346	56699	Mm.293378	NM_020006	ENSMUSG00000041598	Cdc42ep4	1500041M20Rik|Borg4|CEP4	CDC42 effector protein (Rho GTPase binding) 4	protein-coding
unique_peak2-33423-6-4-0.24347001549294-0.989110657569874	chr11	60212336	60212768	+	0	NA	Intergenic	Intergenic	18049	NM_145427	246782	Mm.41651	NM_145427	ENSMUSG00000042709	Atpaf2	ATP12|ATP12p	ATP synthase mitochondrial F1 complex assembly factor 2	protein-coding
unique_peak1-1770-18-0-4.31291915122835-NA	chr13	112594524	112595134	+	0	NA	intron (NM_011945, intron 1 of 19)	intron (NM_011945, intron 1 of 19)	4362	NM_011945	26401	Mm.15918	NM_011945	ENSMUSG00000021754	Map3k1	MAPKKK1|MEKK1|Mekk	mitogen-activated protein kinase kinase kinase 1	protein-coding
unique_peak2-33956-2-9--2.23938235115068-1.87199725847353	chr12	79296017	79296267	+	0	NA	Intergenic	Intergenic	-31500	NM_172952	268566	Mm.341742	NM_145965	ENSMUSG00000047454	Gphn	5730552E08Rik|AI662856|BC027112|C230040D23|GPH|GPHRYN|geph	gephyrin	protein-coding
common_peak1-10772-91-133-0.00734275514456595-0.304271029343793	chr14	73142448	73144253	+	0	NA	Intergenic	Intergenic	-33540	NM_207636	319448	Mm.205421	NM_207636	ENSMUSG00000033487	Fndc3a	1700094E19Rik|D14Ertd453e|F730017H24Rik|Fndc3|sys	fibronectin type III domain containing 3A	protein-coding
common_peak1-11220-32-37-0.0311645057760748-0.312460117298692	chr15	79229005	79229994	+	0	NA	intron (NM_172608, intron 1 of 8)	B1_Mur2|SINE|Alu	3850	NM_001253817	223693	Mm.323358	NM_172608	ENSMUSG00000009035	Tmem184b	2610507A11|4732495E13Rik	transmembrane protein 184b	protein-coding
common_peak1-18809-49-40-0.6487318184071-1.51460024573214	chr9	79215232	79217069	+	0	NA	Intergenic	Intergenic	150959	NR_045336	100038575	Mm.367838	NR_045336		Gm10635	ENSMUSG00000074174	predicted gene 10635	ncRNA
common_peak2-28393-48-49-0.32707096146009-0.682033507942397	chr4	139580404	139581380	+	0	NA	Intergenic	Intergenic	-56951	NM_173427	242721	Mm.60400	NM_173427	ENSMUSG00000078234	Klhdc7a	B230308G19Rik	kelch domain containing 7A	protein-coding
common_peak2-30029-16-21--0.341167976369236-0.392630012299441	chr6	125424441	125425369	+	0	NA	intron (NM_007657, intron 1 of 7)	intron (NM_007657, intron 1 of 7)	19868	NM_007657	12527	Mm.210676	NM_007657	ENSMUSG00000030342	Cd9	Tspan29	CD9 antigen	protein-coding
unique_peak2-37992-5-8--0.874305337448166-1.10484139239135	chr6	22351064	22351539	+	0	NA	Intergenic	Intergenic	-45220	NM_138587	27999	Mm.490307	NM_138587	ENSMUSG00000029672	Fam3c	D6Wsu176e|Ilei	family with sequence similarity 3, member C	protein-coding
common_peak2-19851-23-16-0.634304663258741-0.82304638657543	chr1	91398238	91398822	+	0	NA	intron (NM_001037136, intron 1 of 16)	intron (NM_001037136, intron 1 of 16)	47144	NM_001037136	347722	Mm.291135	NM_178119	ENSMUSG00000055013	Agap1	Centg2|Ggap1|R75364|mKIAA1099	ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	protein-coding
unique_peak1-5539-12-6-0.841421063030034-1.58711810488664	chr5	140518056	140518562	+	0	NA	intron (NM_010752, intron 17 of 17)	intron (NM_010752, intron 17 of 17)	134412	NM_175522	243312	Mm.237102	NM_175522	ENSMUSG00000048988	Elfn1	A930017N06Rik|AI197272|Ppp1r28	leucine rich repeat and fibronectin type III, extracellular 1	protein-coding
common_peak2-19861-18-40--1.04463285338973-1.77675427888235	chr1	92180481	92181288	+	0	NA	Intergenic	Intergenic	80329	NM_007722	12778	Mm.6522	NM_007722		Ackr3	AW541270|CXC-R7|CXCR-7|Cmkor1|Cxcr7|RDC-1|Rdc1	atypical chemokine receptor 3	protein-coding
unique_peak2-35134-4-7--1.02346051385325-1.09384600808989	chr16	30553064	30553377	+	0	NA	Intergenic	Intergenic	-2556	NM_172614	224090	Mm.241459	NM_172614		Tmem44	1700007N03Rik|9330161C17Rik|B230220N21	transmembrane protein 44	protein-coding
unique_peak2-33690-10-10--0.103016273628528-0.301029995663987	chr11	104618214	104618709	+	0	NA	Intergenic	Lx5|LINE|L1	149147	NM_016780	16416	Mm.87150	NM_016780	ENSMUSG00000020689	Itgb3	CD61|GP3A|INGRB3	integrin beta 3	protein-coding
common_peak2-30547-126-229--0.20782985099255-0.758022663576226	chr7	73557366	73559147	+	0	NA	intron (NM_053080, intron 3 of 12)	intron (NM_053080, intron 3 of 12)	14107	NM_053080	56847	Mm.140988	NM_053080	ENSMUSG00000015134	Aldh1a3	ALDH6|RALDH3|V1	aldehyde dehydrogenase family 1, subfamily A3	protein-coding
common_peak1-13686-7-16--1.28837201095215-1.08658567012551	chr2	29827347	29827773	+	0	NA	intron (NM_001177668, intron 1 of 55)	intron (NM_001177668, intron 1 of 55)	6480	NM_001076554	20740	Mm.204969	NM_001076554	ENSMUSG00000057738	Sptan1	2610027H02Rik|Spna-2|Spna2	spectrin alpha, non-erythrocytic 1	protein-coding
common_peak1-17376-11-10-0.0492619656143161-0.31137425193576	chr7	109559720	109560302	+	0	NA	intron (NM_009287, intron 5 of 11)	intron (NM_009287, intron 5 of 11)	-30198	NM_009103	20133	Mm.197486	NM_009103	ENSMUSG00000030978	Rrm1	RnrM1	ribonucleotide reductase M1	protein-coding
common_peak1-10745-33-37-0.0834100490819436-0.326417267106726	chr14	67932737	67934145	+	0	NA	5' UTR (NM_001037931, exon 1 of 4)	5' UTR (NM_001037931, exon 1 of 4)	107	NM_001037931	628416	Mm.390723	NM_001037931	ENSMUSG00000075549	Gm6878	EG628416	predicted gene 6878	protein-coding
unique_peak2-35170-5-6--0.511735258063458-0.947717972411649	chr16	35869315	35869678	+	0	NA	intron (NM_001039530, intron 1 of 16)	intron (NM_001039530, intron 1 of 16)	1972	NM_001039530	547253	Mm.244406	NM_001039530	ENSMUSG00000034422	Parp14	1600029O10Rik|ARTD8|BC021340|CoaSt6|mKIAA1268	poly (ADP-ribose) polymerase family, member 14	protein-coding
common_peak2-21041-75-115--0.118914003384287-0.363644558008837	chr11	35969695	35971639	+	0	NA	intron (NM_001290702, intron 8 of 27)	intron (NM_001290702, intron 8 of 27)	-177076	NM_170779	211652	Mm.31267	NM_170779		Wwc1	AA408228|AU017197|BC037006|Kibra|mKIAA0869	WW, C2 and coiled-coil domain containing 1	protein-coding
common_peak2-31886-22-32--0.397110014271049-0.488172498216822	chr9	56106738	56107727	+	0	NA	exon (NM_172924, exon 4 of 7)	exon (NM_172924, exon 4 of 7)	-98355	NM_019793	56434	Mm.28484	NM_019793	ENSMUSG00000032324	Tspan3	1700055K04Rik|TM4-A|Tm4sf8	tetraspanin 3	protein-coding
common_peak2-30907-7-9--0.522837264589173-1.05908390183068	chr7	143549259	143549680	+	0	NA	Intergenic	Intergenic	-8371	NR_040459	330664	Mm.127762	NR_040459		C230079O03Rik	C230079O03	RIKEN cDNA C230079O03 gene	ncRNA
common_peak2-31810-14-21--0.560215458279653-0.519193887192484	chr9	40192015	40192791	+	0	NA	intron (NM_172768, intron 2 of 19)	intron (NM_172768, intron 2 of 19)	51346	NR_040728	73558	Mm.398307	NR_040728		1700110K17Rik	-	RIKEN cDNA 1700110K17 gene	ncRNA
common_peak2-30417-39-35-0.445836245476841-0.810079075897168	chr7	39517268	39518077	+	0	NA	Intergenic	Intergenic	-204460	NM_001013810	434171	Mm.60990	NM_001013810	ENSMUSG00000060565	Gm5591	EG434171	predicted gene 5591	protein-coding
unique_peak1-6603-10-7-0.356415345008769-1.12966497611638	chr8	57589565	57590175	+	0	NA	Intergenic	Intergenic	795891	NM_175939	244486	Mm.67684	NM_175939	ENSMUSG00000046258	Adam29	-	a disintegrin and metallopeptidase domain 29	protein-coding
common_peak2-25982-17-9-0.896368243317676-1.09394599973099	chr19	53903861	53904478	+	0	NA	intron (NM_001170847, intron 5 of 13)	intron (NM_001170847, intron 5 of 13)	-62552	NM_011050	18569	Mm.1605	NM_011050	ENSMUSG00000024975	Pdcd4	D19Ucla1|Ma3|Tis	programmed cell death 4	protein-coding
unique_peak2-39980-6-32--2.47899600897815-4.54209996799533	chrX	153498145	153499007	+	0	NA	Intergenic	L1_Mus3|LINE|L1	354642	NM_011077	18675	Mm.2529	NM_011077	ENSMUSG00000057457	Phex	Gy|HPDR|HPDR1|Hyp|PEX	phosphate regulating endopeptidase homolog, X-linked	protein-coding
common_peak1-18228-26-33--0.159563749091877-0.332062764479297	chr8	26118432	26119313	+	0	NA	intron (NM_007404, intron 1 of 22)	intron (NM_007404, intron 1 of 22)	8522	NM_001270996	11502	Mm.28908	NM_007404	ENSMUSG00000031555	Adam9	AU020942|MDC9|Mltng|mKIAA0021	a disintegrin and metallopeptidase domain 9 (meltrin gamma)	protein-coding
common_peak2-29350-22-51--1.05315561305369-2.27205585058211	chr5	149229081	149229937	+	0	NA	Intergenic	B3|SINE|B2	-18029	NM_007513	11987	Mm.275489	NM_007513	ENSMUSG00000041313	Slc7a1	4831426K01Rik|AI447493|Atrc-1|Atrc1|Cat1|Rec-1|Rev-1|mCAT-1	solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	protein-coding
common_peak2-27207-26-30--0.0262972182284127-0.301029995663988	chr3	40949732	40950725	+	0	NA	Intergenic	L1_Mus2|LINE|L1	-63260	NM_027558	70804	Mm.40321	NM_027558	ENSMUSG00000049940	Pgrmc2	4631434O19Rik|5730409G06Rik|DG6|PMBP	progesterone receptor membrane component 2	protein-coding
common_peak1-12451-8-12--0.695217300193522-0.475924844171029	chr17	83276175	83276682	+	0	NA	Intergenic	Intergenic	201137	NR_045094	100503434	Mm.187281	NR_045094		Gm19689	-	predicted gene, 19689	ncRNA
unique_peak1-1309-11-5-0.923731083530457-1.477227296591	chr11	120510498	120511042	+	0	NA	Intergenic	(TTC)n|Simple_repeat|Simple_repeat	-1119	NM_001204820	68515	Mm.194594	NM_026751	ENSMUSG00000025141	Myadml2	1110012N22Rik	myeloid-associated differentiation marker-like 2	protein-coding
unique_peak2-37306-4-8--1.19338551529556-1.21878474469819	chr4	123687234	123687731	+	0	NA	Intergenic	Intergenic	92806	NM_017475	54170	Mm.220922	NM_017475	ENSMUSG00000028646	Rragc	AU041672|Gtr2|RAGC|TIB929|YGR163W	Ras-related GTP binding C	protein-coding
unique_peak1-6842-11-8-0.338768582809301-1.14218153353838	chr8	83737877	83738465	+	0	NA	Intergenic	Lx|LINE|L1	-128290	NM_001024617	234515	Mm.324468	NM_001024617	ENSMUSG00000037940	Inpp4b	E130107I17Rik	inositol polyphosphate-4-phosphatase, type II	protein-coding
common_peak2-26985-11-9-0.186765489364251-0.344532117358383	chr2	167924986	167925559	+	0	NA	3' UTR (NM_021409, exon 3 of 3)	3' UTR (NM_021409, exon 3 of 3)	18768	NM_021409	58220	Mm.292834	NM_021409	ENSMUSG00000044641	Pard6b	AV025615|Par6b	par-6 family cell polarity regulator beta	protein-coding
unique_peak2-32667-3-10--1.87341470859657-1.75805390616669	chr1	135793682	135794213	+	0	NA	3' UTR (NM_001160420, exon 7 of 7)	3' UTR (NM_001160420, exon 7 of 7)	9803	NM_054076	269120	Mm.59985	NM_054076	ENSMUSG00000010311	Optc	-	opticin	protein-coding
unique_peak1-396-11-2-1.92373108353046-2.32232533660526	chr1	154085926	154086477	+	0	NA	Intergenic	MusHAL1|LINE|L1	147611	NM_025677	66637	Mm.379120	NM_025677	ENSMUSG00000014980	Tsen15	5730449L18Rik|AL023077|Sen15	tRNA splicing endonuclease 15 homolog (S. cerevisiae)	protein-coding
common_peak2-28895-7-6--0.00826409175941478-0.97990265578305	chr5	90785871	90786304	+	0	NA	intron (NM_030886, intron 2 of 34)	B1_Mm|SINE|Alu	9124	NM_030886	81702	Mm.245522	NM_030886	ENSMUSG00000055204	Ankrd17	4933425K22Rik|A130069E23Rik|A930008M01|AA407558|AA516750|AU040470|Foe|Gtar|Mask|mKIAA0697	ankyrin repeat domain 17	protein-coding
common_peak2-21731-31-24-0.581382481038399-0.907273387067398	chr11	114668554	114669066	+	0	NA	TTS (NM_181749)	TTS (NM_181749)	8572	NM_181749	217302	Mm.269127	NM_181749	ENSMUSG00000034677	Gpr142	PGR2	G protein-coupled receptor 142	protein-coding
common_peak1-9948-15-25--0.688274967585436-0.73354163167379	chr12	110978228	110979009	+	0	NA	promoter-TSS (NR_029878)	promoter-TSS (NR_029878)	-102	NR_029878	723857		NR_029878	miRBase:MI0000794	Mir377	Mirn377|mmu-mir-377	microRNA 377	ncRNA
common_peak2-21007-7-8--0.370834171144123-1.00793137938329	chr11	28906331	28906775	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-124198	NM_027869	71701	Mm.211131	NM_027869	ENSMUSG00000020464	Pnpt1	1200003F12Rik|Old35|PNPase|Pnptl1	polyribonucleotide nucleotidyltransferase 1	protein-coding
unique_peak1-4227-7-0-2.79909083029819-2.40823996531185	chr2	122772381	122772803	+	0	NA	Intergenic	LTR16E2|LTR|ERVL	164857	NM_021507	59010	Mm.28986	NM_021507	ENSMUSG00000005803	Sqrdl	0610039J17Rik|4930557M22Rik	sulfide quinone reductase-like (yeast)	protein-coding
common_peak2-22120-19-35--0.767237674780626-1.06916698217164	chr12	84192910	84193951	+	0	NA	intron (NM_001282061, intron 13 of 16)	intron (NM_001282061, intron 13 of 16)	-153288	NR_046045	74283	Mm.398247	NR_046045		1700085C21Rik	-	RIKEN cDNA 1700085C21 gene	ncRNA
unique_peak2-39591-6-21--1.894033508257-2.21753093801298	chr9	76104791	76105779	+	0	NA	intron (NM_198962, intron 2 of 7)	intron (NM_198962, intron 2 of 7)	-43821	NM_205844	404194	Mm.213862	NM_205844	ENSMUSG00000059383	Gfral	AY457637|Gral	GDNF family receptor alpha like	protein-coding
common_peak1-12414-47-109--0.846518288758112-3.28442083541891	chr17	74294458	74295984	+	0	NA	intron (NM_011723, intron 1 of 35)	B4A|SINE|B4	4315	NM_011723	22436	Mm.11223	NM_011723	ENSMUSG00000024066	Xdh	XO|Xor|Xox-1|Xox1	xanthine dehydrogenase	protein-coding
common_peak2-28319-42-48-0.127619483751976-0.377714458142987	chr4	133625473	133626645	+	0	NA	intron (NM_001162970, intron 1 of 19)	intron (NM_001162970, intron 1 of 19)	1692	NM_001162970	230806	Mm.240080	NM_001162970	ENSMUSG00000012123	Aim1l	-	absent in melanoma 1-like	protein-coding
unique_peak1-4557-16-1-3.11826364226806-4.46429741251234	chr3	50523418	50524180	+	0	NA	Intergenic	Intergenic	-276264	NM_011990	26570	Mm.260988	NM_011990	ENSMUSG00000027737	Slc7a11	9930009M05Rik|AI451155|sut|xCT	solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	protein-coding
common_peak2-24639-28-31-0.0529591198214625-0.314603908022751	chr17	35049919	35050958	+	0	NA	promoter-TSS (NM_023557)	promoter-TSS (NM_023557)	-973	NM_023557	70129	Mm.183126	NM_023557	ENSMUSG00000007034	Slc44a4	2210409B01Rik|NG22	solute carrier family 44, member 4	protein-coding
common_peak2-24252-12-11-0.0638134843664826-0.337263207250336	chr16	92233975	92234486	+	0	NA	Intergenic	Intergenic	-58404	NM_134110	246133	Mm.156736	NM_134110	ENSMUSG00000039672	Kcne2	2200002I16Rik|AW048273|MiRP1	potassium voltage-gated channel, Isk-related subfamily, gene 2	protein-coding
unique_peak1-645-8-5-0.420259917226415-1.10484139239135	chr10	44013378	44013799	+	0	NA	intron (NM_053069, intron 3 of 7)	intron (NM_053069, intron 3 of 7)	25424	NM_053069	11793	Mm.22264	NM_053069	ENSMUSG00000038160	Atg5	2010107M05Rik|3110067M24Rik|AW319544|Apg5l|Atg5l|C88337|Paddy	autophagy related 5	protein-coding
common_peak2-23196-19-20-0.0103699038829257-0.306326795069978	chr15	83410470	83411412	+	0	NA	exon (NM_183017, exon 10 of 14)	exon (NM_183017, exon 10 of 14)	14646	NM_183017	223723	Mm.46778	NM_183017	ENSMUSG00000016757	Ttll12	BC055368|D430005B17	tubulin tyrosine ligase-like family, member 12	protein-coding
common_peak2-25898-9-10--0.269818212233077-1.05503135781948	chr19	45560061	45560487	+	0	NA	intron (NM_001286466, intron 4 of 13)	intron (NM_001286466, intron 4 of 13)	74759	NM_020032	56626	Mm.46509	NM_020032	ENSMUSG00000025218	Poll	1110003P06Rik|AV007317	polymerase (DNA directed), lambda	protein-coding
unique_peak2-32519-8-11--0.579740082773585-1.14218153353838	chr1	59119880	59120585	+	0	NA	intron (NM_175200, intron 8 of 12)	intron (NM_175200, intron 8 of 12)	31512	NM_175200	73463	Mm.252811	NM_175200	ENSMUSG00000072295	Als2cr11	1700052H20Rik|4930408G06Rik	amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 11 (human)	protein-coding
common_peak2-23404-20-21-0.0286431659538957-0.306080386793804	chr15	59386571	59387516	+	0	NA	intron (NM_026746, intron 4 of 6)	RCHARR1|DNA|MER1_type	-93166	NM_144549	211770	Mm.40298	NM_144549	ENSMUSG00000032501	Trib1	A530090O15Rik|TRB-1|Trb1	tribbles homolog 1 (Drosophila)	protein-coding
common_peak2-28660-27-23-0.40658345017408-0.622271369641148	chr5	31526488	31527296	+	0	NA	intron (NR_105788, intron 5 of 7)	ID_B1|SINE|B4	-3974	NM_008014	14208	Mm.14501	NM_008014	ENSMUSG00000029147	Ppm1g	AI385652|Fin13	protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform	protein-coding
common_peak1-9541-7-4-0.477162735410827-1.09384600808989	chr11	116216827	116217351	+	0	NA	intron (NM_027258, intron 8 of 18)	intron (NM_027258, intron 8 of 18)	-20421	NM_008240	15223	Mm.378938	NM_008240	ENSMUSG00000034227	Foxj1	FKHL-13|HFH-4|Hfh4	forkhead box J1	protein-coding
unique_peak1-6171-11-5-0.923731083530457-1.477227296591	chr6	145359349	145359921	+	0	NA	intron (NM_028742, intron 8 of 9)	L1Md_F|LINE|L1	23490	NR_003625	381827	Mm.179075	NM_001001987		1700073E17Rik	-	ribosomal protein L7 pseudogene	pseudo
common_peak1-11488-20-18-0.240147271147608-0.388034239052786	chr15	102325889	102326866	+	0	NA	intron (NM_001103166, intron 13 of 13)	intron (NM_001103166, intron 13 of 13)	21058	NM_001163643	26404	Mm.172897	NM_009582	ENSMUSG00000023050	Map3k12	DLK|MUK|Zpk	mitogen-activated protein kinase kinase kinase 12	protein-coding
unique_peak2-32588-3-7--1.41398308995928-1.23214870625617	chr1	89574700	89575109	+	0	NA	intron (NR_122078, intron 6 of 27)	intron (NR_122078, intron 6 of 27)	58017	NM_001110193	16331	Mm.15105	NM_010566	ENSMUSG00000026288	Inpp5d	SHIP|SHIP-1|SHIP1|SIP-145|p150Ship|s-SHIP	inositol polyphosphate-5-phosphatase D	protein-coding
unique_peak2-37378-4-6--0.830815435910851-0.989110657569874	chr4	138464933	138465328	+	0	NA	intron (NM_028453, intron 2 of 7)	intron (NM_028453, intron 2 of 7)	4732	NM_028453	73162	Mm.238081	NM_028453	ENSMUSG00000041161	Otud3	3110030K17Rik	OTU domain containing 3	protein-coding
unique_peak2-37199-8-9--0.316705676939792-1.03275496310833	chr4	59806007	59806569	+	0	NA	Intergenic	MT2B|LTR|ERVL	-9561	NM_001013577	66209	Mm.51988	NM_001013577	ENSMUSG00000038544	Inip	1110054O05Rik|2610312O17Rik|AA399876|Ssbip1	INTS3 and NABP interacting protein	protein-coding
common_peak1-11510-15-13-0.204809828498052-0.368541233333383	chr16	18234671	18235422	+	0	NA	exon (NM_172151, exon 1 of 11)	exon (NM_172151, exon 1 of 11)	183	NM_172151	27801	Mm.326263	NM_172151	ENSMUSG00000060166	Zdhhc8	D16H22S1738E|DHHC-8|E330009O14Rik|Op53c05|ZDHHCL1	zinc finger, DHHC domain containing 8	protein-coding
common_peak2-25394-11-8-0.338768582809301-1.14218153353838	chr19	5013493	5013924	+	0	NA	Intergenic	Intergenic	-10298	NM_007854	13340	Mm.4930	NM_007854	ENSMUSG00000024891	Slc29a2	Der12|Ent2|Hnp36	solute carrier family 29 (nucleoside transporters), member 2	protein-coding
common_peak2-20707-9-12--0.510826311736872-0.394412252720706	chr10	93641833	93642324	+	0	NA	intron (NM_011629, intron 9 of 13)	B3|SINE|B2	-19676	NM_025551	66414	Mm.27886	NM_025551	ENSMUSG00000020022	Ndufa12	2410011G03Rik|AW112974	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12	protein-coding
common_peak2-19616-20-25--0.212364933549899-0.342639663781856	chr1	36303028	36303633	+	0	NA	Intergenic	MT2C_Mm|LTR|ERVL	-2183	NM_198899	320011	Mm.261022	NM_198899	ENSMUSG00000037470	Uggt1	0910001L17Rik|A930007H10Rik|AA589501|AI414429|AI448372|C820010P03Rik|GT|UGT1|Ugcgl1	UDP-glucose glycoprotein glucosyltransferase 1	protein-coding
unique_peak2-39942-4-10--1.48289213249054-1.5150158574804	chrX	130695959	130696480	+	0	NA	exon (NM_183319, exon 1 of 3)	exon (NM_183319, exon 1 of 3)	248	NM_183319	331524	Mm.235055	NM_183319	ENSMUSG00000031258	Xkrx	A630026F04	X Kell blood group precursor related X linked	protein-coding
unique_peak2-36106-3-5--0.998945590680433-0.96108193396963	chr2	66256776	66257180	+	0	NA	intron (NM_018733, intron 1 of 26)	intron (NM_018733, intron 1 of 26)	21916	NM_018733	20265	Mm.439704	NM_018733	ENSMUSG00000064329	Scn1a	B230332M13|Nav1.1	sodium channel, voltage-gated, type I, alpha	protein-coding
common_peak1-9282-46-20-1.50567852047004-4.84590562572524	chr11	88164583	88166277	+	0	NA	promoter-TSS (NR_039545)	promoter-TSS (NR_039545)	-845	NR_039545	100628571		NR_039545	miRBase:MI0016973	Mir378b	mmu-mir-378b	microRNA 378b	ncRNA
unique_peak2-38609-10-16--0.73104749624157-0.604422558181019	chr7	80026836	80027664	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	219704	NR_046024	625243	Mm.261798	NR_046024		Gm6567	-	predicted gene 6567	ncRNA
unique_peak1-604-8-3-1.00522241794757-1.39487600375387	chr10	20114881	20115532	+	0	NA	Intergenic	Intergenic	47581	NM_027930	71804	Mm.262151	NM_027930	ENSMUSG00000019992	Mtfr2	2610016C23Rik|4933412C16Rik|Dufd1|Fam54a	mitochondrial fission regulator 2	protein-coding
common_peak2-25813-6-6--0.241956811677302-0.947717972411649	chr19	38031848	38032293	+	0	NA	intron (NM_001099634, intron 20 of 52)	intron (NM_001099634, intron 20 of 52)	85997	NM_001099634	226101	Mm.34674	NM_177035	ENSMUSG00000048612	Myof	2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3	myoferlin	protein-coding
unique_peak1-2915-10-1-2.35641534500877-2.57096726280955	chr17	47748868	47749275	+	0	NA	promoter-TSS (NM_016859)	promoter-TSS (NM_016859)	526	NM_020048	56771	Mm.59393	NM_020048	ENSMUSG00000092558	Med20	1110011O05Rik|2410115I17Rik|AU018348|Trfp	mediator complex subunit 20	protein-coding
common_peak2-31876-19-16-0.315224485411347-0.448200956659575	chr9	55136463	55137095	+	0	NA	Intergenic	Intergenic	-5347	NM_032002	83961	Mm.443874	NM_032002	ENSMUSG00000032311	Nrg4	AI552600	neuregulin 4	protein-coding
common_peak2-23692-22-15-0.647284105087405-0.849699271740893	chr15	87655183	87655974	+	0	NA	Intergenic	B3|SINE|B2	-29205	NR_105817	102465209		NR_105817	miRBase:MI0021927	Mir6393	mmu-mir-6393	microRNA mir-6393	ncRNA
unique_peak2-37077-8-7-0.00522241794757061-1.00793137938329	chr3	148918519	148919044	+	0	NA	Intergenic	Intergenic	-18920	NR_040591	381482	Mm.393866	NR_040591		Gm1653	-	predicted gene 1653	ncRNA
common_peak1-7697-23-24-0.0779113147343562-0.318406410381916	chr1	82831249	82832162	+	0	NA	Intergenic	L2a|LINE|L2	-4353	NM_010472	15463	Mm.392569	NM_010472	ENSMUSG00000026159	Agfg1	AU045498|C130049H11Rik|C85612|D730048C23Rik|Hrb|RAB|Rip	ArfGAP with FG repeats 1	protein-coding
common_peak1-12629-32-48--0.335617824895548-0.503563708672202	chr18	34330576	34331684	+	0	NA	Intergenic	Intergenic	-49508	NM_007462	11789	Mm.384171	NM_007462	ENSMUSG00000005871	Apc	AI047805|AU020952|AW124434|CC1|Min|mAPC	adenomatosis polyposis coli	protein-coding
common_peak1-18916-18-9-0.990991056340989-1.23014042908325	chr9	44267528	44268261	+	0	NA	Intergenic	Intergenic	-5044	NM_009476	22269	Mm.4453	NM_009476	ENSMUSG00000041523	Upk2	AW491716|UPII	uroplakin 2	protein-coding
common_peak2-28571-9-16--0.897849434846119-0.732381977911291	chr5	8622198	8622906	+	0	NA	exon (NM_198620, exon 1 of 10)	exon (NM_198620, exon 1 of 10)	400	NM_198620	242819	Mm.332192	NM_198620	ENSMUSG00000040570	Rundc3b	Gm440	RUN domain containing 3B	protein-coding
common_peak2-20563-20-54--1.29328492893347-3.32003866131528	chr10	75212046	75212721	+	0	NA	intron (NM_172549, intron 7 of 36)	intron (NM_172549, intron 7 of 36)	14719	NM_172549	104248	Mm.257404	NM_172549	ENSMUSG00000020196	Cabin1	A330070M20Rik|Cain|Ppp3in	calcineurin binding protein 1	protein-coding
unique_peak1-3468-8-0-3.00522241794757-2.70926996097583	chr19	10030724	10031173	+	0	NA	Intergenic	B1_Mur2|SINE|Alu	-24142	NR_073181	14319	Mm.1776	NM_010239	ENSMUSG00000024661	Fth1	FHC|Fth|HFt|MFH	ferritin heavy chain 1	protein-coding
common_peak1-7762-10-9-0.0344872501214071-1.05503135781948	chr1	91822906	91823565	+	0	NA	Intergenic	Intergenic	4516	NM_010262	14472	Mm.204730	NM_010262		Gbx2	D130058E05Rik|Gbx-2|MMoxA|Stra7	gastrulation brain homeobox 2	protein-coding
unique_peak1-334-11-1-2.50869358425161-2.83420869758413	chr1	133267734	133268219	+	0	NA	intron (NM_001081011, intron 4 of 22)	L1_Mm|LINE|L1	-91836	NM_019777	56489	Mm.386783	NM_019777	ENSMUSG00000042349	Ikbke	AW558201|IKK-i|IKKepsilon|Ikki	inhibitor of kappaB kinase epsilon	protein-coding
common_peak1-18306-18-11-0.727956650507195-0.876666802405043	chr8	46224848	46225824	+	0	NA	Intergenic	Intergenic	25163	NR_040690	622523	Mm.390032	NR_040690		Gm6329	EG622523	predicted gene 6329	ncRNA
common_peak1-11651-33-34-0.202054545580562-0.406785247261493	chr16	23224575	23225730	+	0	NA	promoter-TSS (NM_001252505)	promoter-TSS (NM_001252505)	339	NM_145933	20440	Mm.149029	NM_145933	ENSMUSG00000022885	St6gal1	AW742324|Siat1|St6Gal-I|St6gal|St6galI	beta galactoside alpha 2,6 sialyltransferase 1	protein-coding
common_peak2-26474-76-113--0.0709456283014598-0.316681094180467	chr2	77945224	77946512	+	0	NA	intron (NR_108098, intron 2 of 6)	intron (NR_108098, intron 2 of 6)	56634	NR_108098	78158	Mm.78473	NR_108098	ENSMUSG00000085431	4930440I19Rik	-	RIKEN cDNA 4930440I19 gene	ncRNA
unique_peak1-583-7-1-1.79909083029819-1.80617997398389	chr10	8095879	8096386	+	0	NA	intron (NM_177387, intron 2 of 7)	intron (NM_177387, intron 2 of 7)	142491	NM_177387	338362	Mm.41163	NM_177387	ENSMUSG00000047712	Ust	D930010O20Rik|UA2OST	uronyl-2-sulfotransferase	protein-coding
unique_peak1-7065-10-8-0.186490343566457-1.078512453669	chr9	13563353	13563878	+	0	NA	intron (NR_024025, intron 1 of 15)	B4|SINE|B4	9990	NR_024025	77116	Mm.210405	NM_023858	ENSMUSG00000031918	Mtmr2	6030445P13Rik	myotubularin related protein 2	protein-coding
common_peak2-24986-86-148--0.243532726429808-0.685017158075147	chr18	9957365	9958947	+	0	NA	promoter-TSS (NM_153552)	promoter-TSS (NM_153552)	-22	NM_153552	225160	Mm.219648	NM_153552	ENSMUSG00000024287	Thoc1	3110002N20Rik|AW107452|NMP-84	THO complex 1	protein-coding
unique_peak1-5684-9-2-1.60465090568306-1.87199725847353	chr6	32392194	32392649	+	0	NA	intron (NM_175750, intron 3 of 31)	intron (NM_175750, intron 3 of 31)	-68720	NR_040277	319849	Mm.440860	NR_040277	ENSMUSG00000086763	Plxna4os1	B230378P21Rik	plexin A4, opposite strand 1	ncRNA
unique_peak1-3199-21-7-1.56948926526624-2.44150343356329	chr18	54909066	54910208	+	0	NA	Intergenic	Intergenic	138239	NR_045400	328957	Mm.402781	NR_045400		9330117O12Rik	9330117O12	RIKEN cDNA 9330117O12 gene	ncRNA
common_peak2-20412-35-23-0.846407757741348-1.63799378205027	chr10	25426642	25427748	+	0	NA	Intergenic	Intergenic	130048	NR_045349	73803	Mm.258921	NR_045349		4930401C15Rik	-	RIKEN cDNA 4930401C15 gene	ncRNA
unique_peak2-39584-1-5--2.2120195109379-1.32905871926422	chr9	75772598	75772846	+	0	NA	Intergenic	Intergenic	-90062	NM_173731	208982	Mm.82306	NM_173731	ENSMUSG00000007908	Hmgcll1	BC037381	3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1	protein-coding
common_peak2-23352-39-19-1.29383315203179-3.27638997629153	chr15	41693109	41693884	+	0	NA	TTS (NM_001130165)	TTS (NM_001130165)	7770	NM_175456	223513	Mm.148913	NM_175456	ENSMUSG00000042895	Abra	C130068O12Rik|STARS	actin-binding Rho activating protein	protein-coding
unique_peak1-2946-12-5-1.06381348436648-1.78669045979184	chr17	66509855	66510314	+	0	NA	Intergenic	Intergenic	37224	NM_001003919	320209	Mm.259605	NM_001003919	ENSMUSG00000035842	Ddx11	4732462I11Rik|CHL1|CHLR1|KRG2|essa15a	DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11	protein-coding
unique_peak2-34426-4-8--1.19338551529556-1.21878474469819	chr14	20608593	20609153	+	0	NA	intron (NM_008695, intron 8 of 20)	intron (NM_008695, intron 8 of 20)	34172	NM_026528	68045	Mm.21932	NM_026528	ENSMUSG00000021807	2700060E02Rik	-	RIKEN cDNA 2700060E02 gene	protein-coding
unique_peak2-32479-1-4--1.94898510510411-1.10720996964787	chr1	34841529	34841873	+	0	NA	Intergenic	B4A|SINE|B4	-16866	NM_183019	226970	Mm.41604	NM_183019	ENSMUSG00000037509	Arhgef4	9330140K16Rik|Asef|ENSMUSG00000070955	Rho guanine nucleotide exchange factor (GEF) 4	protein-coding
common_peak1-17288-10-15--0.643584654991231-0.519648556297791	chr6	135363853	135364354	+	0	NA	Intergenic	Intergenic	46592	NM_001288627	13730	Mm.182785	NM_010128	ENSMUSG00000030208	Emp1	I-8-09|TMP	epithelial membrane protein 1	protein-coding
unique_peak1-4386-8-2-1.42025991722641-1.65811743852845	chr2	163555268	163555695	+	0	NA	intron (NM_001272052, intron 9 of 11)	intron (NM_001272052, intron 9 of 11)	20494	NM_007398	11486	Mm.388	NM_007398	ENSMUSG00000017697	Ada	-	adenosine deaminase	protein-coding
common_peak2-30569-16-11-0.533301141546906-0.58239619684445	chr7	79780492	79781107	+	0	NA	Intergenic	Intergenic	-329318	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding
common_peak2-23619-19-18-0.154759813218101-0.351190433797598	chr15	82338434	82338947	+	0	NA	Intergenic	RMER17A-int|LTR|ERVK	-46838	NM_201360	380997	Mm.482248	NM_201360	ENSMUSG00000096852	Cyp2d12	9030605E09Rik	cytochrome P450, family 2, subfamily d, polypeptide 12	protein-coding
common_peak1-9076-14-13-0.0918612383000403-0.332077462497413	chr11	69418275	69418883	+	0	NA	intron (NM_013415, intron 1 of 6)	CpG	883	NM_013415	11932	Mm.235204	NM_013415	ENSMUSG00000041329	Atp1b2	Amog|Atpb-2	ATPase, Na+/K+ transporting, beta 2 polypeptide	protein-coding
common_peak1-17220-27-20-0.599228528116475-0.90781512069806	chr6	125482399	125483527	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-20003	NM_011708	22371	Mm.22339	NM_011708	ENSMUSG00000001930	Vwf	6820430P06Rik|AI551257|B130011O06Rik|C630030D09|F8VWF|VWD	Von Willebrand factor homolog	protein-coding
unique_peak1-3332-10-3-1.35641534500877-1.75805390616669	chr18	84851875	84852445	+	0	NA	promoter-TSS (NM_001289531)	promoter-TSS (NM_001289531)	-709	NM_001289531	66054	Mm.29646	NM_023149	ENSMUSG00000024644	Cndp2	0610010E05Rik|C76600|Cn2|Dip-2|Pep-1|Pep1	CNDP dipeptidase 2 (metallopeptidase M20 family)	protein-coding
unique_peak1-1360-12-1-2.64877598508764-3.36932189928148	chr12	25190063	25190704	+	0	NA	intron (NR_028341, intron 3 of 13)	intron (NR_028341, intron 3 of 13)	6937	NR_028341	21340	Mm.39082	NM_020614	ENSMUSG00000059669	Taf1b	4930408G01Rik|A230108M10Rik|TAFI68|Tafi86	TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B	protein-coding
unique_peak1-725-10-5-0.771452844287613-1.33892459842472	chr10	94047058	94047639	+	0	NA	intron (NM_177026, intron 3 of 3)	intron (NM_177026, intron 3 of 3)	1596	NR_106070	102466817		NR_106070	miRBase:MI0023706	Mir7211	mmu-mir-7211	microRNA mir-7211	ncRNA
unique_peak2-39992-4-8--1.19338551529556-1.21878474469819	chrX	160766252	160766638	+	0	NA	intron (NM_001301402, intron 4 of 8)	L1ME3A|LINE|L1	-45035	NM_010216	14205	Mm.297978	NM_010216	ENSMUSG00000031380	Figf	AI325264|VEGF-D|Vegfd	c-fos induced growth factor	protein-coding
unique_peak2-32666-7-8--0.370834171144123-1.00793137938329	chr1	135467097	135467533	+	0	NA	Intergenic	PB1|SINE|Alu	39542	NM_009227	20643	Mm.249110	NM_009227	ENSMUSG00000090553	Snrpe	AL022645|C76690|SME	small nuclear ribonucleoprotein E	protein-coding
common_peak1-16443-26-37--0.320028421285123-0.460129356264038	chr5	135008199	135009125	+	0	NA	intron (NM_009990, intron 2 of 16)	intron (NM_009990, intron 2 of 16)	19642	NM_001039162	269713	Mm.255138	NM_009990	ENSMUSG00000063146	Clip2	B230327O20|CLIP-115|Clip1|Cyln2|WSCR4|mKIAA0291|wbscr4	CAP-GLY domain containing linker protein 2	protein-coding
common_peak1-9118-144-220-0.0817269770509936-0.394791244844973	chr11	74723001	74725063	+	0	NA	intron (NM_013761, intron 5 of 8)	(TTTA)n|Simple_repeat|Simple_repeat	5084	NR_028562	100217469		NR_028562		Snord91a	MBII-296	small nucleolar RNA, C/D box 91A	snoRNA
unique_peak2-34695-4-7--1.02346051385325-1.09384600808989	chr15	25652250	25652682	+	0	NA	intron (NM_019472, intron 5 of 40)	intron (NM_019472, intron 5 of 40)	100161	NM_019472	17909	Mm.60590	NM_019472	ENSMUSG00000022272	Myo10	AW048724|D15Ertd600e|mKIAA0799	myosin X	protein-coding
common_peak2-25421-6-4-0.24347001549294-0.989110657569874	chr19	3282018	3282453	+	0	NA	promoter-TSS (NM_172252)	promoter-TSS (NM_172252)	775	NM_009212	20589	Mm.3179	NM_009212		Ighmbp2	AEP|Catf1|RIPE3b1|Smbp-2|Smbp2|Smubp2|nmd|sma	immunoglobulin mu binding protein 2	protein-coding
common_peak2-27611-15-24--0.631691439219068-0.650819692678081	chr3	104288190	104289180	+	0	NA	intron (NM_001025067, intron 8 of 17)	RLTR12B|LTR|ERVK	27094	NM_001025067	269473	Mm.34855	NM_001025067	ENSMUSG00000032913	Lrig2	4632419I10Rik|BB096938	leucine-rich repeats and immunoglobulin-like domains 2	protein-coding
unique_peak2-38367-9-27--1.61774151565338-2.34622402919155	chr7	5061292	5062002	+	0	NA	3' UTR (NM_001145013, exon 3 of 3)	3' UTR (NM_001145013, exon 3 of 3)	6866	NM_001145013	192658	Mm.28764	NM_138954	ENSMUSG00000035191	Rfpl4	D7Ertd486e|Rfpl4a	ret finger protein-like 4	protein-coding
common_peak2-29417-228-191-1.08444023972858-17.6319570766355	chr6	4600504	4602005	+	0	NA	Intergenic	L1Md_F2|LINE|L1	50188	NM_145398	213819	Mm.270703	NM_145398	ENSMUSG00000015189	Casd1	Cas1|Cast1	CAS1 domain containing 1	protein-coding
common_peak2-26934-37-38-0.24059085262357-0.466726531031556	chr2	163995192	163995920	+	0	NA	intron (NM_008435, intron 1 of 3)	intron (NM_008435, intron 1 of 3)	1293	NM_008435	16538	Mm.6217	NM_008435	ENSMUSG00000040164	Kcns1	Kv9.1	K+ voltage-gated channel, subfamily S, 1	protein-coding
unique_peak2-35072-4-6--0.830815435910851-0.989110657569874	chr16	15636958	15637329	+	0	NA	promoter-TSS (NM_011159)	promoter-TSS (NM_011159)	350	NM_008565	17217	Mm.1500	NM_008565	ENSMUSG00000022673	Mcm4	19G|AI325074|AU045576|Cdc21|Mcmd4|mKIAA4003|mcdc21	minichromosome maintenance deficient 4 homolog (S. cerevisiae)	protein-coding
unique_peak2-33192-2-6--1.72480917832092-1.26211192963361	chr10	107632100	107632514	+	0	NA	intron (NM_027892, intron 1 of 25)	B2_Mm1a|SINE|B2	32851	NM_027892	17931	Mm.422959	NM_027892	ENSMUSG00000019907	Ppp1r12a	1200015F06Rik|5730577I22Rik|AA792106|AV099298|D10Ertd625e|Mypt1	protein phosphatase 1, regulatory (inhibitor) subunit 12A	protein-coding
common_peak1-18873-26-43--0.531532526478835-0.806432121853421	chr9	22389307	22390245	+	0	NA	intron (NM_181316, intron 9 of 21)	intron (NM_181316, intron 9 of 21)	109617	NM_178415	319845	Mm.176725	NM_178415	ENSMUSG00000035919	Bbs9	E130103I17Rik	Bardet-Biedl syndrome 9 (human)	protein-coding
common_peak1-9760-35-39-0.109442163575141-0.343417008601348	chr12	54729014	54729935	+	0	NA	intron (NM_013780, intron 3 of 11)	intron (NM_013780, intron 3 of 11)	379810	NM_013780	27386	Mm.247044	NM_013780	ENSMUSG00000021010	Npas3	4930423H22Rik|bHLHe12	neuronal PAS domain protein 3	protein-coding
common_peak1-9349-64-57-0.607465406581031-1.75136096541679	chr11	97279439	97280767	+	0	NA	Intergenic	Intergenic	-31371	NM_021493	58996	Mm.394118	NM_021493	ENSMUSG00000049807	Arhgap23	A330041B18Rik	Rho GTPase activating protein 23	protein-coding
unique_peak1-7311-16-7-1.11826364226806-1.23399803405144	chr9	118389300	118390188	+	0	NA	intron (NM_010136, intron 2 of 5)	intron (NM_010136, intron 2 of 5)	2437	NM_010136	13813	Mm.200692	NM_010136	ENSMUSG00000032446	Eomes	C77258|TBR-2|Tbr2	eomesodermin homolog (Xenopus laevis)	protein-coding
common_peak2-21531-8-11--0.579740082773585-1.14218153353838	chr11	95259276	95259794	+	0	NA	Intergenic	Intergenic	13299	NM_016752	110172	Mm.4593	NM_016752		Slc35b1	Ugalt2	solute carrier family 35, member B1	protein-coding
common_peak2-26410-23-41--0.67054991826968-1.0364730969458	chr2	59611457	59612749	+	0	NA	intron (NM_001290659, intron 6 of 25)	intron (NM_001290659, intron 6 of 25)	108560	NM_001159636	72137	Mm.288734	NM_028118	ENSMUSG00000026988	Wdsub1	1700048E19Rik|2610014F08Rik	WD repeat, SAM and U-box domain containing 1	protein-coding
unique_peak1-3371-40-18-1.41104816930751-3.87249650846231	chr19	3335442	3337105	+	0	NA	intron (NM_013495, intron 1 of 18)	intron (NM_013495, intron 1 of 18)	12972	NM_013495	12894	Mm.18522	NM_013495	ENSMUSG00000024900	Cpt1a	C730027G07|CPTI|Cpt1	carnitine palmitoyltransferase 1a, liver	protein-coding
common_peak1-12913-20-11-0.903112283870037-1.11267835143409	chr18	85304905	85305797	+	0	NA	Intergenic	Intergenic	-184435	NM_025969	67105	Mm.250617	NM_025969	ENSMUSG00000024645	Timm21	1700034H14Rik|2700002I20Rik	tranlocase of inner mitochondrial membrane 21	protein-coding
common_peak1-13661-11-11--0.0762689164695427-0.301029995663976	chr2	27326904	27327576	+	0	NA	intron (NM_001113574, intron 1 of 12)	intron (NM_001113574, intron 1 of 12)	3678	NM_023336	67382	Mm.28721	NM_023336	ENSMUSG00000026918	Brd3	2410084F24Rik|AW060456|Fsrg2|ORFX|RINGL3	bromodomain containing 3	protein-coding
common_peak2-29268-10-15--0.643584654991231-0.519648556297791	chr5	142464033	142464511	+	0	NA	intron (NM_177879, intron 14 of 44)	intron (NM_177879, intron 14 of 44)	-413179	NM_199068	17425	Mm.24214	NM_010812	ENSMUSG00000056493	Foxk1	A630048H08Rik|AI463295|ENSMUSG00000075577|Gm10868|Mnf	forkhead box K1	protein-coding
common_peak2-25520-39-36-0.406307881290203-0.734468890407008	chr19	5770766	5771654	+	0	NA	intron (NM_023912, intron 1 of 16)	CpG	191	NM_023912	78891	Mm.276063	NM_023912	ENSMUSG00000024941	Scyl1	2810011O19Rik|C85140|Ntkl|mdf|mfd|p105	SCY1-like 1 (S. cerevisiae)	protein-coding
common_peak1-9350-41-18-1.45322119140507-4.04334585201374	chr11	97301471	97303224	+	0	NA	Intergenic	Intergenic	-9127	NM_021493	58996	Mm.394118	NM_021493	ENSMUSG00000049807	Arhgap23	A330041B18Rik	Rho GTPase activating protein 23	protein-coding
common_peak2-25766-10-7-0.356415345008769-1.12966497611638	chr19	32186506	32186998	+	0	NA	Intergenic	Intergenic	-9122	NM_018830	54447	Mm.491229	NM_018830	ENSMUSG00000024887	Asah2	AI585898	N-acylsphingosine amidohydrolase 2	protein-coding
common_peak2-19837-9-9--0.132314688483142-1.03275496310833	chr1	90922001	90922383	+	0	NA	Intergenic	B4A|SINE|B4	9504	NR_040471	73475	Mm.491040	NR_040471		1700067G17Rik	-	RIKEN cDNA 1700067G17 gene	ncRNA
unique_peak1-4055-18-9-0.990991056340989-1.23014042908325	chr2	60697988	60698884	+	0	NA	intron (NM_020296, intron 1 of 13)	RMER15-int|LTR|ERVL	21059	NM_001141932	56878	Mm.259667	NM_020296	ENSMUSG00000026970	Rbms1	2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1	RNA binding motif, single stranded interacting protein 1	protein-coding
common_peak2-27106-39-34-0.486478229974187-0.89292906939411	chr3	8923157	8924065	+	0	NA	exon (NM_025434, exon 1 of 3)	exon (NM_025434, exon 1 of 3)	246	NM_025434	66230	Mm.38460	NM_025434	ENSMUSG00000040269	Mrps28	1500012D08Rik|AW061224	mitochondrial ribosomal protein S28	protein-coding
common_peak1-18196-95-135-0.0604525037736749-0.339446412954381	chr8	22476002	22477978	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-10291	NM_007844	13218	Mm.304264	NM_007844	ENSMUSG00000074437	Defa-rs1	2010300L12Rik|2010319H24Rik|CRS1C|CRS1C-2|CRS1C-5|Defcr-rs1	defensin, alpha, related sequence 1	protein-coding
common_peak1-16577-14-25--0.801223557783447-0.84969927174089	chr5	146948369	146949054	+	0	NA	Intergenic	L1VL4|LINE|L1	48169	NM_001008547	69282	Mm.373573	NM_001008547	ENSMUSG00000095040	1700001J03Rik	-	RIKEN cDNA 1700001J03 gene	protein-coding
common_peak2-27370-59-82--0.0496754304743465-0.306391792142995	chr3	85574038	85574714	+	0	NA	Intergenic	Intergenic	-24245	NM_172682	229488	Mm.119926	NM_172682	ENSMUSG00000051000	Fam160a1	9930021J17Rik	family with sequence similarity 160, member A1	protein-coding
common_peak1-12904-18-25--0.38752056691274-0.421916810733234	chr18	82914461	82915281	+	0	NA	Intergenic	Intergenic	13560	NR_045389	76961	Mm.396392	NR_045389		2210420H20Rik	-	RIKEN cDNA 2210420H20 gene	ncRNA
common_peak2-21892-14-8-0.729291158915332-0.771068449301682	chr12	3422331	3422918	+	0	NA	intron (NR_030694, intron 1 of 2)	ORR1A2|LTR|MaLR	4123	NR_030694	100043040	Mm.415417	NR_030694	ENSMUSG00000071456	1110002L01Rik	-	RIKEN cDNA 1110002L01 gene	ncRNA
common_peak1-12123-19-48--1.21202251745352-2.65769701904854	chr17	26676373	26677083	+	0	NA	Intergenic	L1MB1|LINE|L1	-21729	NM_026170	67458	Mm.30496	NM_026170	ENSMUSG00000001576	Ergic1	1200007D18Rik|maa-136	endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	protein-coding
common_peak1-19192-11-12--0.191746133889479-0.310474156842889	chr9	99701838	99702392	+	0	NA	Intergenic	Intergenic	74474	NM_011440	20669	Mm.261595	NM_011440	ENSMUSG00000053747	Sox14	-	SRY (sex determining region Y)-box 14	protein-coding
unique_peak2-32477-3-9--1.73591118484664-1.57096726280955	chr1	34236119	34236507	+	0	NA	exon (NM_010081, exon 23 of 24)	exon (NM_010081, exon 23 of 24)	19138	NM_010081	13518	Mm.336625	NM_010081	ENSMUSG00000026131	Dst	2310001O04Rik|A830042E19Rik|AW554249|BP230|BPAG1-n|Bpag|Bpag1|Macf2|ah|athetoid|dt|mKIAA0728|nmf203|nmf339	dystonin	protein-coding
common_peak1-15469-38-37-0.323525145854945-0.611014125894502	chr4	106858948	106860571	+	0	NA	intron (NM_029565, intron 2 of 7)	ID4_|SINE|ID	8524	NM_029565	56374	Mm.291192	NM_029565	ENSMUSG00000028618	Tmem59	1110001M20Rik|3110046P06Rik|AI256529|D4Ertd20e|MTDCF1|ORF18	transmembrane protein 59	protein-coding
unique_peak1-68-17-2-2.63333383748388-3.75443312462699	chr1	36272697	36273532	+	0	NA	exon (NM_198899, exon 6 of 41)	exon (NM_198899, exon 6 of 41)	28033	NM_198899	320011	Mm.261022	NM_198899	ENSMUSG00000037470	Uggt1	0910001L17Rik|A930007H10Rik|AA589501|AI414429|AI448372|C820010P03Rik|GT|UGT1|Ugcgl1	UDP-glucose glycoprotein glucosyltransferase 1	protein-coding
common_peak1-13826-16-14-0.211373046659543-0.364171515310935	chr2	58561670	58562520	+	0	NA	intron (NM_001289660, intron 1 of 7)	intron (NM_001289660, intron 1 of 7)	-45500	NM_001289659	76654	Mm.200370	NM_029692	ENSMUSG00000026839	Upp2	1700124F02Rik|AI266885|UDRPASE2|UP2|UPASE2	uridine phosphorylase 2	protein-coding
common_peak1-17583-23-31--0.278232495490919-0.396392531282608	chr7	39544197	39545144	+	0	NA	Intergenic	Intergenic	-231458	NM_001013810	434171	Mm.60990	NM_001013810	ENSMUSG00000060565	Gm5591	EG434171	predicted gene 5591	protein-coding
common_peak1-16771-10-5-0.771452844287613-1.33892459842472	chr6	37431593	37432149	+	0	NA	Intergenic	Intergenic	-39723	NM_178661	208647	Mm.169929	NM_178661		Creb3l2	BBF2H7|C530025K05Rik|SCIRR69	cAMP responsive element binding protein 3-like 2	protein-coding
common_peak1-15821-20-26--0.266812717572275-0.373496418836697	chr5	96796410	96797454	+	0	NA	Intergenic	(CCAA)n|Simple_repeat|Simple_repeat	-6042	NM_175473	231470	Mm.291120	NM_175473	ENSMUSG00000034687	Fras1	E130113P14Rik|bl|mKIAA1500	Fraser syndrome 1 homolog (human)	protein-coding
common_peak1-10861-35-42-0.00510550376040619-0.30358472802154	chr14	122106487	122107833	+	0	NA	intron (NM_134074, intron 1 of 52)	RSINE1|SINE|B4	-9521	NM_001081039	105445	Mm.441054	NM_134074	ENSMUSG00000025558	Dock9	AA959601|AW538057|B230309H04Rik|D14Wsu89e|Zizimin1|mKIAA1058	dedicator of cytokinesis 9	protein-coding
unique_peak2-32985-5-5--0.289342836727009-0.909929411522249	chr10	59639031	59639340	+	0	NA	Intergenic	Intergenic	42823	NM_016803	53374	Mm.12866	NM_016803	ENSMUSG00000057337	Chst3	C6ST|C6ST-1|GST-0	carbohydrate (chondroitin 6/keratan) sulfotransferase 3	protein-coding
unique_peak1-4333-15-6-1.20480982849805-1.32521814697968	chr2	152804346	152805067	+	0	NA	intron (NM_001083618, intron 3 of 14)	intron (NM_001083618, intron 3 of 14)	16485	NM_001083618	74711	Mm.44746	NM_029064	ENSMUSG00000074673	Ttll9	1700016F23Rik|4930509O20Rik|AW046572	tubulin tyrosine ligase-like family, member 9	protein-coding
unique_peak2-35695-7-9--0.522837264589173-1.05908390183068	chr18	24603358	24603816	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	-15916	NR_029573	387182		NR_029573	miRBase:MI0000229	Mir187	Mirn187|mmu-mir-187	microRNA 187	ncRNA
common_peak1-10417-13-9-0.456543935750406-0.53895475198017	chr13	98693205	98693847	+	0	NA	intron (NM_012026, intron 35 of 35)	intron (NM_012026, intron 35 of 35)	282594	NM_012026	110596	Mm.252718	NM_012026	ENSMUSG00000021662	Arhgef28	9230110L08Rik|AI323540|D13Bwg1089e|RIP2|Rgnef|RhoGEF|Rhoip2|p190RhoGEF	Rho guanine nucleotide exchange factor (GEF) 28	protein-coding
common_peak2-28958-16-35--1.05166135917425-1.68242911687175	chr5	100820289	100820919	+	0	NA	intron (NM_026969, intron 11 of 27)	intron (NM_026969, intron 11 of 27)	24649	NM_026969	69162	Mm.18634	NM_026969	ENSMUSG00000035325	Sec31a	1810024J13Rik|ABP125|ABP130|AU042160|HSPC275|Sec31l1	Sec31 homolog A (S. cerevisiae)	protein-coding
common_peak2-27018-10-9-0.0344872501214071-1.05503135781948	chr2	173273414	173273965	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	-74404	NM_028158	72221	Mm.46132	NM_028158	ENSMUSG00000027518	1700021F07Rik	-	RIKEN cDNA 1700021F07 gene	protein-coding
common_peak2-26268-31-37--0.0226888426304619-0.301029995663945	chr2	30657773	30658535	+	0	NA	promoter-TSS (NM_198000)	promoter-TSS (NM_198000)	-897	NM_198000	73598	Mm.34166	NM_198000	ENSMUSG00000044320	1700001O22Rik	1700113K14Rik|4930549G18Rik	RIKEN cDNA 1700001O22 gene	protein-coding
unique_peak1-4655-13-10-0.319040412000471-0.446472590016315	chr3	89458065	89458830	+	0	NA	intron (NM_080466, intron 5 of 7)	intron (NM_080466, intron 5 of 7)	-60497	NM_001038587	56417	Mm.316628	NM_019655	ENSMUSG00000027951	Adar	AV242451|Adar1|Adar1p110|Adar1p150|mZaADAR	adenosine deaminase, RNA-specific	protein-coding
common_peak2-24643-24-26-0.0383224006042484-0.317118655902073	chr17	35125972	35126944	+	0	NA	Intergenic	B2_Mm1a|SINE|B2	7383	NM_030597	27756	Mm.165735	NM_030597	ENSMUSG00000007050	Lsm2	D17H6S56E-2|D17H6S56E2|Dmapl|Dmpkap|G7b|Sm-X5|SmX5|snRNP	LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	protein-coding
common_peak1-18411-30-38--0.115726809370376-0.312769113767451	chr8	72491764	72492678	+	0	NA	intron (NM_145596, intron 1 of 12)	B3|SINE|B2	6061	NM_001113346	234366	Mm.270044	NM_145596	ENSMUSG00000036180	Gatad2a	1110066C11Rik|BC031407|C80248	GATA zinc finger domain containing 2A	protein-coding
common_peak2-24492-36-54--0.302038627356906-0.47894145157142	chr17	25183712	25184791	+	0	NA	intron (NM_134126, intron 14 of 29)	intron (NM_134126, intron 14 of 29)	31220	NM_134126	106633	Mm.32802	NM_134126	ENSMUSG00000024169	Ift140	AI661311|Tce5|Wdtc2|mKIAA0590	intraflagellar transport 140	protein-coding
unique_peak2-35216-3-6--1.22133801201688-1.08602067057793	chr16	90881096	90881441	+	0	NA	intron (NM_027627, intron 4 of 6)	intron (NM_027627, intron 4 of 6)	50164	NM_001199210	70967	Mm.253077	NM_027627		Eva1c	1700092M14Rik|4931408A02Rik|Fam176c	eva-1 homolog C (C. elegans)	protein-coding
common_peak2-28915-12-9-0.326847890200276-0.459837087125828	chr5	92499271	92499783	+	0	NA	intron (NM_001080796, intron 2 of 10)	intron (NM_001080796, intron 2 of 10)	12416	NM_001080797	23881	Mm.290530	NM_011816	ENSMUSG00000029405	G3bp2	AA409541|E430034L04Rik|G3BP|mKIAA0660	GTPase activating protein (SH3 domain) binding protein 2	protein-coding
common_peak2-19772-67-86-0.101467986934267-0.360487696578537	chr1	82724565	82725800	+	0	NA	intron (NM_029409, intron 2 of 8)	intron (NM_029409, intron 2 of 8)	3689	NM_029409	75734	Mm.396863	NM_029409	ENSMUSG00000026150	Mff	5230400G24Rik|AI314724	mitochondrial fission factor	protein-coding
common_peak1-12288-12-8-0.478850983645327-0.562038191119709	chr17	45594993	45595762	+	0	NA	intron (NM_027649, intron 3 of 7)	intron (NM_027649, intron 3 of 7)	16510	NM_027649	71020	Mm.44257	NM_027649	ENSMUSG00000023935	Spats1	1700011H05Rik|4933400B06Rik|Daip2|Ddip|Srsp1	spermatogenesis associated, serine-rich 1	protein-coding
common_peak2-22601-9-10--0.269818212233077-1.05503135781948	chr13	73803582	73803956	+	0	NA	exon (NM_001040692, exon 10 of 12)	exon (NM_001040692, exon 10 of 12)	11702	NM_001168646	22598	Mm.30370	NM_011730	ENSMUSG00000021612	Slc6a18	B0AT3|D630001K16Rik|Xt2|Xtrp2	solute carrier family 6 (neurotransmitter transporter), member 18	protein-coding
unique_peak2-38608-10-9-0.0344872501214071-1.05503135781948	chr7	80025144	80025763	+	0	NA	Intergenic	Intergenic	221501	NR_046024	625243	Mm.261798	NR_046024		Gm6567	-	predicted gene 6567	ncRNA
common_peak1-11665-21-19-0.247561170378873-0.427564438475253	chr16	25399808	25400809	+	0	NA	intron (NM_175165, intron 4 of 5)	L1_Mus4|LINE|L1	113405	NM_175165	71338	Mm.126851	NM_175165	ENSMUSG00000048399	Tprg	5430420C16Rik|Tprg1	transformation related protein 63 regulated	protein-coding
unique_peak2-39026-4-7--1.02346051385325-1.09384600808989	chr8	61378380	61378805	+	0	NA	intron (NM_175032, intron 1 of 11)	intron (NM_175032, intron 1 of 11)	11832	NM_175032	270049	Mm.236368	NM_175032		Galntl6	1700021K10Rik|4930431L04Rik|A830023L05	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6	protein-coding
unique_peak2-38361-1-4--1.94898510510411-1.10720996964787	chr7	4426068	4426497	+	0	NA	intron (NM_001290416, intron 14 of 19)	intron (NM_001290416, intron 14 of 19)	-3796	NR_028416	320749	Mm.396688	NR_028416		D630041G03Rik	-	RIKEN cDNA D630041G03 gene	ncRNA
unique_peak2-34099-3-5--0.998945590680433-0.96108193396963	chr13	13473295	13473614	+	0	NA	intron (NM_031999, intron 1 of 6)	B1_Mus1|SINE|Alu	12437	NM_031999	83924	Mm.379269	NM_031999	ENSMUSG00000021306	Gpr137b	AI788917|AU016435|AW546472|C730041E01|C80550|C80741|D13Abb1e|Tm7sf1	G protein-coupled receptor 137B	protein-coding
unique_peak2-33785-4-6--0.830815435910851-0.989110657569874	chr11	119817845	119818272	+	0	NA	intron (NM_130862, intron 1 of 13)	intron (NM_130862, intron 1 of 13)	13652	NM_130862	108100	Mm.197534	NM_130862	ENSMUSG00000025372	Baiap2	IRSp53|R75030	brain-specific angiogenesis inhibitor 1-associated protein 2	protein-coding
common_peak1-11790-26-15-0.927899092158462-1.40782320807777	chr16	50528377	50529311	+	0	NA	intron (NR_040379, intron 1 of 5)	CpG	229	NR_040379	619312	Mm.427671	NR_040379		G730013B05Rik	-	RIKEN cDNA G730013B05 gene	ncRNA
common_peak1-18820-28-54--0.728400593703197-1.41268768702114	chr9	7183955	7185016	+	0	NA	promoter-TSS (NM_029775)	promoter-TSS (NM_029775)	-81	NM_029775	76863	Mm.27293	NM_029775	ENSMUSG00000032002	Dcun1d5	3110001A18Rik|4833420K19Rik|AW060460|D430047L21Rik	DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)	protein-coding
common_peak2-22025-39-31-0.615761246919154-1.18805111968663	chr12	59130643	59131914	+	0	NA	Intergenic	L1M3|LINE|L1	-181513	NM_009216	20605	Mm.278336	NM_009216		Sstr1	SRIF-2|SS-1-R|SS1-R|SS1R|Smstr-1|Smstr1|sst1	somatostatin receptor 1	protein-coding
common_peak2-30790-7-9--0.522837264589173-1.05908390183068	chr7	127208036	127208488	+	0	NA	Intergenic	Intergenic	-37678	NM_145586	233806	Mm.257952	NM_145586	ENSMUSG00000030917	Tmem159	8430420C20Rik	transmembrane protein 159	protein-coding
unique_peak1-3819-9-0-3.18961340640422-3.01029995663981	chr2	73547624	73548096	+	0	NA	intron (NM_001113246, intron 4 of 12)	intron (NM_001113246, intron 4 of 12)	-49380	NM_001166604	108699	Mm.257073	NM_029716	ENSMUSG00000056486	Chn1	0610007I19Rik|0710001E19Rik|1700112L09Rik|2900046J01Rik|AI413815|ARHGAP2	chimerin 1	protein-coding
common_peak2-24645-34-51--0.318371191139826-0.490454554604827	chr17	35164116	35165046	+	0	NA	TTS (NM_013600)	TTS (NM_013600)	380	NR_028258	78376	Mm.390966	NM_023893	ENSMUSG00000036185	Sapcd1	2810436B06Rik|G7d|Ng23	suppressor APC domain containing 1	protein-coding
common_peak2-26496-10-8-0.186490343566457-1.078512453669	chr2	84633594	84634047	+	0	NA	Intergenic	L1MA5|LINE|L1	-5165	NM_019949	56791	Mm.38261	NM_019949	ENSMUSG00000027078	Ube2l6	2810489I21Rik|RIG-B|UBCH8|Ubce8|Ubcm8	ubiquitin-conjugating enzyme E2L 6	protein-coding
common_peak1-18811-32-58--0.603551030142182-1.11442465192823	chr9	88719244	88720236	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-14262	NM_001177858	666731	Mm.446951	NM_001177858	ENSMUSG00000067399	Trim43c	EG666731|Trim43	tripartite motif-containing 43C	protein-coding
common_peak2-21721-12-17--0.521149016354673-0.417187467413082	chr11	110357784	110358575	+	0	NA	intron (NM_011943, intron 8 of 11)	MLT1A0|LTR|MaLR	97743	NM_011943	26399	Mm.14487	NM_011943	ENSMUSG00000020623	Map2k6	MEK6|MKK6|Prkmk6|SAPKK3	mitogen-activated protein kinase kinase 6	protein-coding
unique_peak2-34465-5-6--0.511735258063458-0.947717972411649	chr14	31393178	31393561	+	0	NA	Intergenic	Intergenic	8034	NR_037237	100526475		NR_037237		Mir3076	mmu-mir-3076	microRNA 3076	ncRNA
common_peak2-28541-23-31--0.278232495490919-0.396392531282608	chr5	3320996	3322112	+	0	NA	Intergenic	B3|SINE|B2	-22758	NM_009873	12571	Mm.31672	NM_009873	ENSMUSG00000040274	Cdk6	5830411I20|AI504062|Crk2	cyclin-dependent kinase 6	protein-coding
common_peak1-11661-13-12-0.0780323124966764-0.334470287753051	chr16	25011296	25011927	+	0	NA	Intergenic	Intergenic	-48114	NR_040374	319487	Mm.137341	NR_040374	ENSMUSG00000096960	A230028O05Rik	-	RIKEN cDNA A230028O05 gene	ncRNA
common_peak2-27248-5-8--0.874305337448166-1.10484139239135	chr3	52888673	52889175	+	0	NA	intron (NM_175386, intron 2 of 3)	intron (NM_175386, intron 2 of 3)	43455	NM_175386	108927	Mm.118617	NM_175386	ENSMUSG00000048332	Lhfp	2810489O06Rik|AI194968	lipoma HMGIC fusion partner	protein-coding
common_peak2-24972-15-21--0.447266868081641-0.448200956659578	chr18	6280718	6281415	+	0	NA	Intergenic	Intergenic	-39544	NM_008448	16573	Mm.223744	NM_008448	ENSMUSG00000006740	Kif5b	AL022807|Khc|Khcs|Kns1|Ukhc	kinesin family member 5B	protein-coding
unique_peak2-38967-8-11--0.579740082773585-1.14218153353838	chr8	34224877	34225429	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-164655	NM_001177589	100042715	Mm.291093	NM_001177589		Gm3985	-	predicted gene 3985	protein-coding
common_peak2-26319-15-12-0.311725032414564-0.425539671739611	chr2	32914408	32914935	+	0	NA	intron (NM_178888, intron 3 of 28)	intron (NM_178888, intron 3 of 28)	28053	NM_178888	99326	Mm.41290	NM_178888	ENSMUSG00000038860	Garnl3	AW120551	GTPase activating RANGAP domain-like 3	protein-coding
common_peak1-12502-29-22-0.588728124558098-0.950553505527076	chr17	88510591	88511571	+	0	NA	Intergenic	B1_Mur4|SINE|Alu	-13771	NM_001190356	225058	Mm.312053	NM_001190356		Gm4832	EG225058	predicted gene 4832	protein-coding
common_peak2-22508-16-21--0.341167976369236-0.392630012299441	chr13	52978136	52978939	+	0	NA	intron (NM_016709, intron 6 of 9)	intron (NM_016709, intron 6 of 9)	46509	NM_016709	11992	Mm.252034	NM_016709	ENSMUSG00000021460	Auh	C77140|W91705	AU RNA binding protein/enoyl-coenzyme A hydratase	protein-coding
common_peak1-14590-40-23-1.07401318202994-2.65992162410571	chr3	50442915	50444495	+	0	NA	Intergenic	Intergenic	-196170	NM_011990	26570	Mm.260988	NM_011990	ENSMUSG00000027737	Slc7a11	9930009M05Rik|AI451155|sut|xCT	solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	protein-coding
common_peak1-14952-12-15--0.351224014912361-0.332077462497413	chr3	104288584	104289147	+	0	NA	intron (NM_001025067, intron 8 of 17)	ORR1D1-int|LTR|MaLR	26914	NM_001025067	269473	Mm.34855	NM_001025067	ENSMUSG00000032913	Lrig2	4632419I10Rik|BB096938	leucine-rich repeats and immunoglobulin-like domains 2	protein-coding
unique_peak2-35977-8-11--0.579740082773585-1.14218153353838	chr19	24165862	24166362	+	0	NA	Intergenic	B3A|SINE|B2	-60603	NM_001114174	381217	Mm.426078	NM_001114174	ENSMUSG00000071604	Fam189a2	AI414343|AI666772|Gm967	family with sequence similarity 189, member A2	protein-coding
common_peak2-27068-4-9--1.34538860874061-1.36011389749466	chr2	181838307	181838743	+	0	NA	Intergenic	Intergenic	112594	NM_001205282	672125	Mm.489571	NM_001205282	ENSMUSG00000053277	Gm14496	OTTMUSG00000016837	predicted gene 14496	protein-coding
common_peak1-16499-12-20--0.743541437691122-0.625923329873571	chr5	139252324	139252923	+	0	NA	intron (NM_030565, intron 3 of 9)	intron (NM_030565, intron 3 of 9)	21588	NM_030565	80752	Mm.320355	NM_030565	ENSMUSG00000025854	Fam20c	C76981|DMP-4|DMP4|GEF-CK|mKIAA4081	family with sequence similarity 20, member C	protein-coding
common_peak2-28791-15-9-0.690236655668294-0.732381977911291	chr5	64326592	64327181	+	0	NA	intron (NM_145923, intron 3 of 6)	intron (NM_145923, intron 3 of 6)	33250	NM_145923	100532	Mm.243632	NM_145923	ENSMUSG00000047881	Rell1	AA536743	RELT-like 1	protein-coding
unique_peak1-1747-6-2-0.980435609659146-1.26211192963361	chr13	104177742	104178254	+	0	NA	Intergenic	MIRb|SINE|MIR	-53426	NM_175171	328329	Mm.202606	NM_175171	ENSMUSG00000034751	Mast4	4930420O11Rik|AI642422|mKIAA0303	microtubule associated serine/threonine kinase family member 4	protein-coding
common_peak1-15048-8-13--0.802132504110034-0.562038191119711	chr3	122419872	122420394	+	0	NA	Intergenic	Intergenic	-11943	NM_153422	242202	Mm.134911	NM_153422	ENSMUSG00000053965	Pde5a	Cgbpde|Cn5n|Pde5|Pde5a1	phosphodiesterase 5A, cGMP-specific	protein-coding
unique_peak1-357-8-1-2.00522241794757-2.05605744720049	chr1	136717938	136718418	+	0	NA	intron (NM_001081307, intron 18 of 23)	intron (NM_001081307, intron 18 of 23)	-17880	NR_015606	329251	Mm.188709	NM_001081307	ENSMUSG00000073557	Ppp1r12b	1810037O03Rik|9530009M10Rik|AI132431|Mypt2	protein phosphatase 1, regulatory (inhibitor) subunit 12B	protein-coding
unique_peak1-4061-14-3-1.89921616035764-2.80787975886178	chr2	61139063	61139857	+	0	NA	Intergenic	Intergenic	-277183	NM_011529	21353	Mm.244393	NM_011529	ENSMUSG00000064289	Tank	C86182|E430026L09Rik|I-TRAF	TRAF family member-associated Nf-kappa B activator	protein-coding
common_peak2-29687-9-7-0.18961340640422-1.05908390183068	chr6	72640776	72641204	+	0	NA	intron (NM_009332, intron 3 of 11)	L2a|LINE|L2	61165	NR_040421	100038714	Mm.321330	NR_040421		Gm15401	ENSMUSG00000072999|OTTMUSG00000021199	predicted gene 15401	ncRNA
common_peak2-30601-21-46--0.985099586411402-1.82819694957564	chr7	82866229	82867106	+	0	NA	intron (NM_029332, intron 19 of 36)	intron (NM_029332, intron 19 of 36)	-126557	NM_001122780	207952	Mm.206223	NM_029652	ENSMUSG00000055652	Klhl25	2810402K13Rik|BC027373|Enc-1	kelch-like 25	protein-coding
common_peak2-31936-10-12--0.344024373132323-0.340565874754526	chr9	63895912	63896519	+	0	NA	Intergenic	Intergenic	-1421	NR_040713	68697	Mm.491042	NR_040713	ENSMUSG00000097036	1110036E04Rik	-	RIKEN cDNA 1110036E04 gene	ncRNA
common_peak2-20239-9-21--1.26981821223308-1.37307999835977	chr1	182408311	182408946	+	0	NA	intron (NM_001081227, intron 1 of 3)	intron (NM_001081227, intron 1 of 3)	5007	NM_001081227	381310	Mm.44791	NM_001081227	ENSMUSG00000053963	6330403A02Rik	ENSMUSG00000056615|Gm10001|R75555	RIKEN cDNA 6330403A02 gene	protein-coding
common_peak1-19512-25-35--0.308075096097206-0.423354874519378	chrX	167208136	167209111	+	0	NA	Intergenic	Intergenic	-791774	NR_029457	654820	Mm.34441	NM_001039559	ENSMUSG00000072844	G530011O06Rik	-	RIKEN cDNA G530011O06 gene	ncRNA
common_peak2-26117-7-8--0.370834171144123-1.00793137938329	chr2	6129738	6130173	+	0	NA	intron (NM_024208, intron 1 of 4)	intron (NM_024208, intron 1 of 4)	4085	NM_024208	67856	Mm.38342	NM_024208	ENSMUSG00000039063	Echdc3	2310005D12Rik|AI662097	enoyl Coenzyme A hydratase domain containing 3	protein-coding
unique_peak2-35624-6-14--1.34149248522822-1.01572999746118	chr17	87236610	87237235	+	0	NA	Intergenic	RSINE1|SINE|B4	-79766	NM_001277980	78469	Mm.67234	NM_030104	ENSMUSG00000037689	Tmem247	1700090G07Rik	transmembrane protein 247	protein-coding
common_peak2-26940-19-17-0.232762325219374-0.392630012299441	chr2	164454697	164455502	+	0	NA	Intergenic	RMER3D-int|LTR|ERVK	9203	NM_001012723	277345	Mm.247244	NM_001012723	ENSMUSG00000070530	Wfdc16	BC043944|WAP16	WAP four-disulfide core domain 16	protein-coding
common_peak2-23481-26-29-0.0210084965499435-0.304710633611964	chr15	74714487	74715597	+	0	NA	Intergenic	L1MB3|LINE|L1	-2908	NM_025929	67038	Mm.154566	NM_025929	ENSMUSG00000063522	2010109I03Rik	-	RIKEN cDNA 2010109I03 gene	protein-coding
common_peak2-32064-55-74--0.0241988193431784-0.301029995664056	chr9	92229088	92230793	+	0	NA	intron (NM_001033184, intron 1 of 6)	intron (NM_001033184, intron 1 of 6)	25725	NM_001033184	78459	Mm.179195	NM_001033184	ENSMUSG00000074139	1700057G04Rik	-	RIKEN cDNA 1700057G04 gene	protein-coding
common_peak2-29895-10-13--0.450939577048835-0.386243247519795	chr6	113418648	113419329	+	0	NA	intron (NM_001034029, intron 12 of 13)	intron (NM_001034029, intron 12 of 13)	-2461	NM_178942	171095	Mm.213397	NM_134159	ENSMUSG00000030281	Il17rc	1110025H02Rik|Gm19850|IL-17RC|IL17-RC|IL17-RL|Il17rl	interleukin 17 receptor C	protein-coding
common_peak2-27221-49-86--0.436659672823544-1.00422562882459	chr3	51339667	51340826	+	0	NA	intron (NM_080793, intron 4 of 7)	intron (NM_080793, intron 4 of 7)	-23433	NR_033624	100039684	Mm.387178	NR_033624	ENSMUSG00000097885	5031434O11Rik	AI481280|Gm2370	RIKEN cDNA 5031434O11 gene	ncRNA
common_peak2-22075-11-9-0.186765489364251-0.344532117358383	chr12	76403660	76404168	+	0	NA	Intergenic	RLTR20C|LTR|ERVK	-5386	NM_023275	80837	Mm.27467	NM_023275	ENSMUSG00000046768	Rhoj	1110005O19Rik|AW210585|Arhj|TC10L|TCL	ras homolog gene family, member J	protein-coding
common_peak2-29868-20-15-0.488074784591193-0.590343908676236	chr6	108306233	108306778	+	0	NA	exon (NM_010585, exon 10 of 62)	exon (NM_010585, exon 10 of 62)	-133232	NR_106121	102465766		NR_106121		Mir7661	mmu-mir-7661	microRNA mir-7661	ncRNA
unique_peak2-37234-5-6--0.511735258063458-0.947717972411649	chr4	89137367	89137803	+	0	NA	Intergenic	Intergenic	-180644	NM_007670	12579	Mm.423094	NM_007670	ENSMUSG00000073802	Cdkn2b	AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b	cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)	protein-coding
common_peak2-24584-37-58--0.356649977876023-0.602366141647657	chr17	31657956	31658836	+	0	NA	intron (NM_001083891, intron 1 of 2)	intron (NM_001083891, intron 1 of 2)	1336	NM_001083891	78330	Mm.28349	NM_030087	ENSMUSG00000024038	Ndufv3	1500032D16Rik	NADH dehydrogenase (ubiquinone) flavoprotein 3	protein-coding
common_peak2-25731-28-36--0.156494245807488-0.329362479200675	chr19	24173528	24174652	+	0	NA	intron (NM_001198985, intron 19 of 22)	intron (NM_001198985, intron 19 of 22)	-68581	NM_001114174	381217	Mm.426078	NM_001114174	ENSMUSG00000071604	Fam189a2	AI414343|AI666772|Gm967	family with sequence similarity 189, member A2	protein-coding
unique_peak2-36888-9-18--1.05831410703937-0.965105923112245	chr3	95668336	95669010	+	0	NA	intron (NM_078479, intron 1 of 1)	ID_B1|SINE|B4	5869	NM_078479	66292	Mm.24108	NM_078479	ENSMUSG00000054312	Mrps21	1810031B19Rik	mitochondrial ribosomal protein S21	protein-coding
common_peak2-22089-30-58--0.712967639869968-1.42954500397924	chr12	79171914	79172953	+	0	NA	Intergenic	ORR1C2|LTR|MaLR	-155209	NM_172952	268566	Mm.341742	NM_145965	ENSMUSG00000047454	Gphn	5730552E08Rik|AI662856|BC027112|C230040D23|GPH|GPHRYN|geph	gephyrin	protein-coding
common_peak1-13011-98-76-0.93498215273565-5.29621579031393	chr19	5015164	5017168	+	0	NA	Intergenic	Intergenic	-7840	NM_007854	13340	Mm.4930	NM_007854	ENSMUSG00000024891	Slc29a2	Der12|Ent2|Hnp36	solute carrier family 29 (nucleoside transporters), member 2	protein-coding
common_peak1-15269-15-10-0.552733131918359-0.604422558181019	chr4	32408996	32409775	+	0	NA	Intergenic	Intergenic	-95025	NM_001109661	12014	Mm.491223	NM_007521	ENSMUSG00000040270	Bach2	E030004N02Rik	BTB and CNC homology 2	protein-coding
unique_peak2-38625-6-6--0.241956811677302-0.947717972411649	chr7	80826254	80826719	+	0	NA	Intergenic	Intergenic	4963	NR_033604	244061	Mm.484605	NR_033604		Gm4971	EG244061	Smad nuclear interacting protein 1 pseudogene	pseudo
common_peak2-29156-107-119-0.447156337064877-1.86143700073016	chr5	129724751	129725808	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	122654	NM_001081342	243277	Mm.440501	NM_177734	ENSMUSG00000044017	Gpr133	E230012M21Rik	G protein-coupled receptor 133	protein-coding
common_peak1-12694-19-14-0.495796731053168-0.607095980551316	chr18	40218754	40219482	+	0	NA	Intergenic	Intergenic	159935	NM_023311	67180	Mm.270382	NM_023311	ENSMUSG00000024487	Yipf5	2610311I19Rik|AA408236|Yip1a	Yip1 domain family, member 5	protein-coding
unique_peak2-36335-5-7--0.704380336005853-1.01466476204226	chr2	91101723	91102181	+	0	NA	intron (NM_001289677, intron 5 of 9)	B1_Mur1|SINE|Alu	-3320	NM_001166024	77038	Mm.43636	NM_023854	ENSMUSG00000027255	Arfgap2	2310032E02Rik|Zfp289	ADP-ribosylation factor GTPase activating protein 2	protein-coding
unique_peak1-5136-10-4-1.03448725012141-1.5150158574804	chr5	8649084	8649669	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-10716	NM_011076	18671	Mm.207354	NM_011076	ENSMUSG00000040584	Abcb1a	Abcb4|Evi32|Mdr1a|Mdr3|P-gp|Pgp|Pgy-3|Pgy3|mdr-3	ATP-binding cassette, sub-family B (MDR/TAP), member 1A	protein-coding
common_peak1-12900-59-40-0.967811996254494-3.25247856210074	chr18	82736775	82738928	+	0	NA	intron (NM_001025256, intron 2 of 5)	intron (NM_001025256, intron 2 of 5)	13951	NM_001025254	17196	Mm.252063	NM_010777	ENSMUSG00000041607	Mbp	C76307|Hmbpr|R75289|golli-mbp|mld|shi	myelin basic protein	protein-coding
unique_peak2-33115-2-6--1.72480917832092-1.26211192963361	chr10	81185022	81185375	+	0	NA	TTS (NM_001243067)	TTS (NM_001243067)	17628	NM_001243067	73610	Mm.490466	NM_001243067		Zfp433	1700123A16Rik	RIKEN cDNA 1700123A16 gene	protein-coding
common_peak1-7925-27-26-0.236658448731768-0.436052471002789	chr1	143738914	143740136	+	0	NA	Intergenic	Intergenic	-1186546	NR_040604	75910	Mm.483845	NR_040604		4930590L20Rik	-	RIKEN cDNA 4930590L20 gene	ncRNA
unique_peak1-4150-8-0-3.00522241794757-2.70926996097583	chr2	96063645	96064146	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-94431	NM_001289742	241568	Mm.241682	NM_178725	ENSMUSG00000050587	Lrrc4c	6430556C10Rik|NGL-1	leucine rich repeat containing 4C	protein-coding
unique_peak1-6266-12-7-0.648775985087639-0.697979855752659	chr7	24593850	24594588	+	0	NA	promoter-TSS (NM_001166727)	promoter-TSS (NM_001166727)	0	NM_001166727	622222	Mm.480269	NM_001166727	ENSMUSG00000095632	Vmn1r175	EG622222|Gm6299	vomeronasal 1 receptor 175	protein-coding
unique_peak1-1917-16-2-2.53330114154691-3.78760380288747	chr14	73796741	73797347	+	0	NA	Intergenic	Intergenic	-11966	NM_008410	16432	Mm.4266	NM_008410	ENSMUSG00000022108	Itm2b	AI256040|Bri|Bri2|Bricd2b|D14Sel6|E25BMM|imBRI2	integral membrane protein 2B	protein-coding
common_peak1-10998-64-29-1.55855580610008-7.06781075233344	chr15	36817749	36819588	+	0	NA	Intergenic	Intergenic	-91984	NM_001253806	22631	Mm.3360	NM_011740	ENSMUSG00000022285	Ywhaz	1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	protein-coding
common_peak2-20227-16-6-1.31090872021046-1.49151883326344	chr1	180980928	180981364	+	0	NA	intron (NM_027188, intron 8 of 11)	L1MB8|LINE|L1	466988	NM_027188	69726	Mm.222338	NM_027188		Smyd3	2410008A19Rik|Zmynd1	SET and MYND domain containing 3	protein-coding
common_peak2-29231-23-31--0.278232495490919-0.396392531282608	chr5	138441268	138442173	+	0	NA	Intergenic	MTA_Mm-int|LTR|MaLR	18971	NM_013478	12007	Mm.30061	NM_013478	ENSMUSG00000037053	Azgp1	Zag	alpha-2-glycoprotein 1, zinc	protein-coding
common_peak2-28989-6-13--1.2419568116773-1.58711810488664	chr5	107597297	107597768	+	0	NA	intron (NM_011578, intron 4 of 16)	intron (NM_011578, intron 4 of 16)	121082	NM_011578	21814	Mm.200775	NM_011578	ENSMUSG00000029287	Tgfbr3	1110036H20Rik|AU015626|AW215636|TBRIII	transforming growth factor, beta receptor III	protein-coding
common_peak1-12166-67-88-0.0686780518165975-0.33102652425296	chr17	29450638	29452132	+	0	NA	Intergenic	Intergenic	-4442	NM_023734	74116	Mm.30950	NM_023734	ENSMUSG00000024011	Pi16	1200009H11Rik|Cripi|PI-16	peptidase inhibitor 16	protein-coding
common_peak2-26101-9-9--0.132314688483142-1.03275496310833	chr2	3711650	3712269	+	0	NA	Intergenic	Intergenic	81229	NM_025626	66540	Mm.277864	NM_025626	ENSMUSG00000026655	Fam107b	3110001A13Rik|AA589595|AA959793|AI132312	family with sequence similarity 107, member B	protein-coding
common_peak1-8303-17-34--0.910986678739929-1.23560027455358	chr10	37137854	37138815	+	0	NA	Intergenic	Intergenic	-279602	NM_008538	17118	Mm.30059	NM_008538	ENSMUSG00000069662	Marcks	Macs|PKCSL	myristoylated alanine rich protein kinase C substrate	protein-coding
unique_peak2-35176-3-6--1.22133801201688-1.08602067057793	chr16	45034310	45034705	+	0	NA	Intergenic	Intergenic	-59659	NM_026439	67896	Mm.181074	NM_026439	ENSMUSG00000022665	Ccdc80	2610001E17Rik|DRO1|Ssg1|Urb	coiled-coil domain containing 80	protein-coding
common_peak1-8241-7-14--1.10779976531033-0.817533494790411	chr10	14705156	14705686	+	0	NA	Intergenic	RLTR11A|LTR|ERVK	225326	NM_008703	18101	Mm.487342	NM_008703	ENSMUSG00000019865	Nmbr	BB182387	neuromedin B receptor	protein-coding
common_peak1-7636-22-19-0.325356010200042-0.479250674391597	chr1	64956249	64957156	+	0	NA	intron (NM_001039493, intron 3 of 7)	intron (NM_001039493, intron 3 of 7)	46696	NM_001039493	241075	Mm.239534	NM_175509	ENSMUSG00000051344	Plekhm3	9430067K14Rik|A230102O09Rik|AI449570|DAPR|Plekhm1l	pleckstrin homology domain containing, family M, member 3	protein-coding
unique_peak1-6043-9-2-1.60465090568306-1.87199725847353	chr6	115315540	115316008	+	0	NA	intron (NM_001127330, intron 1 of 7)	intron (NM_001127330, intron 1 of 7)	4535	NM_001127330	19016	Mm.3020	NM_011146	ENSMUSG00000000440	Pparg	Nr1c3|PPAR-gamma|PPAR-gamma2|PPARgamma|PPARgamma2	peroxisome proliferator activated receptor gamma	protein-coding
common_peak2-24858-9-7-0.18961340640422-1.05908390183068	chr17	78400514	78400768	+	0	NA	Intergenic	Intergenic	-198947	NM_015800	50766	Mm.311912	NM_015800	ENSMUSG00000024074	Crim1	AU015004	cysteine rich transmembrane BMP regulator 1 (chordin like)	protein-coding
common_peak1-10278-13-12-0.0780323124966764-0.334470287753051	chr13	59454369	59454988	+	0	NA	Intergenic	Intergenic	191134	NM_001284221	67269	Mm.153008	NM_023328	ENSMUSG00000021557	Agtpbp1	1700020N17Rik|2310001G17Rik|2900054O13Rik|4930445M19Rik|5730402G09Rik|CCP1|Nna1|nmf243|pcd	ATP/GTP binding protein 1	protein-coding
unique_peak2-35635-1-10--3.08648862885404-2.57096726280955	chr17	87713176	87713731	+	0	NA	intron (NM_028639, intron 5 of 19)	intron (NM_028639, intron 5 of 19)	31227	NM_028639	225049	Mm.77396	NM_028639	ENSMUSG00000036918	Ttc7	1110035E02Rik|1700007L07Rik|Ttc7a|fsn|hea	tetratricopeptide repeat domain 7	protein-coding
common_peak1-10321-18-26--0.441968350935117-0.471456499375593	chr13	72624336	72625223	+	0	NA	Intergenic	Intergenic	141233	NR_030701	328287	Mm.235072	NR_030701		Gm20554	D430050G20	predicted gene, 20554	ncRNA
unique_peak1-3137-9-6-0.382258484346616-1.11707584880836	chr18	36388306	36388744	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	-31711	NM_001167891	100042150	Mm.380390	NM_001167891	ENSMUSG00000060275	Nrg2	Don1|NTAK	neuregulin 2	protein-coding
common_peak1-10856-37-20-1.13367564870706-2.58657013435546	chr14	121435019	121436709	+	0	NA	intron (NM_134082, intron 1 of 26)	intron (NM_134082, intron 1 of 26)	1068	NM_134082	223254	Mm.223980	NM_134082	ENSMUSG00000025555	Farp1	AW228844|BC030329|Cdep	FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived)	protein-coding
common_peak1-12732-19-7-1.40268732666169-1.89173646618542	chr18	54827919	54828856	+	0	NA	Intergenic	Intergenic	56989	NR_045400	328957	Mm.402781	NR_045400		9330117O12Rik	9330117O12	RIKEN cDNA 9330117O12 gene	ncRNA
common_peak1-13325-19-12-0.702247608520594-0.840839978588874	chr19	42717064	42717868	+	0	NA	Intergenic	Lx|LINE|L1	-30170	NM_053083	67573	Mm.178767	NM_053083	ENSMUSG00000025185	Loxl4	4833426I20Rik|Loxc	lysyl oxidase-like 4	protein-coding
common_peak1-14102-57-32-1.22163892072048-4.45839639202807	chr2	126029687	126031492	+	0	NA	Intergenic	Intergenic	52712	NM_026981	69185	Mm.29019	NM_026981	ENSMUSG00000023330	Dtwd1	1810033A06Rik	DTW domain containing 1	protein-coding
common_peak2-26069-64-71-0.295521400266291-0.696474447554397	chr2	75612156	75614506	+	0	NA	Intergenic	Intergenic	-56903	NM_172666	228061	Mm.31227	NM_172666	ENSMUSG00000042410	Agps	5832437L22|9930035G10Rik|AW123847|Adaps|Adas|Adhaps|Adps|Aldhpsy|bs2	alkylglycerone phosphate synthase	protein-coding
unique_peak1-4166-13-7-0.778472030637769-0.817533494790411	chr2	109402441	109403048	+	0	NA	Intergenic	Intergenic	-112113	NM_007540	12064	Mm.1442	NM_007540	ENSMUSG00000048482	Bdnf	-	brain derived neurotrophic factor	protein-coding
common_peak1-10664-8-8--0.164702583494742-1.00793137938329	chr14	50808068	50808556	+	0	NA	Intergenic	Intergenic	-1419	NM_146493	258486	Mm.377529	NM_146493	ENSMUSG00000050431	Olfr730	MOR247-1	olfactory receptor 730	protein-coding
unique_peak2-38821-7-12--0.901348887842903-1.31827279259406	chr7	140116593	140116972	+	0	NA	Intergenic	Intergenic	-24523	NM_207302	360216	Mm.389984	NM_207302	ENSMUSG00000030967	Zranb1	9330160G10Rik|D7Wsu87e|Gm1956|Trabid	zinc finger, RAN-binding domain containing 1	protein-coding
common_peak1-7978-43-62--0.194716737976214-0.39202633512402	chr1	159231511	159232950	+	0	NA	intron (NM_177644, intron 1 of 17)	intron (NM_177644, intron 1 of 17)	-110253	NR_027984	69953	Mm.286863	NM_027274	ENSMUSG00000049881	2810025M15Rik	AI429618	RIKEN cDNA 2810025M15 gene	ncRNA
unique_peak2-36129-4-8--1.19338551529556-1.21878474469819	chr2	10080603	10081022	+	0	NA	intron (NM_172471, intron 1 of 13)	intron (NM_172471, intron 1 of 13)	5642	NM_172471	209378	Mm.313876	NM_172471	ENSMUSG00000025780	Itih5	4631408O11Rik|5430408M01Rik|E130106B02	inter-alpha (globulin) inhibitor H5	protein-coding
common_peak1-17226-34-28-0.524087531873694-0.913161965438643	chr6	126848366	126849668	+	0	NA	exon (NM_207210, exon 4 of 15)	exon (NM_207210, exon 4 of 15)	22840	NM_207210	101320	Mm.44896	NM_207210	ENSMUSG00000030345	Dyrk4	AW049118|Dyrk4a|Dyrk4b	dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 4	protein-coding
unique_peak1-3602-9-3-1.18961340640422-1.57096726280955	chr19	32274547	32275183	+	0	NA	intron (NM_144792, intron 5 of 9)	intron (NM_144792, intron 5 of 9)	10638	NM_001168526	208449	Mm.329810	NM_144792	ENSMUSG00000040451	Sgms1	9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23	sphingomyelin synthase 1	protein-coding
unique_peak1-2952-14-2-2.31425365963649-3.28500101358144	chr17	70720197	70720752	+	0	NA	Intergenic	Intergenic	-53658	NM_177639	224997	Mm.311840	NM_027712	ENSMUSG00000003279	Dlgap1	4933422O14Rik|9630002F18|AI845682|AI848168|BB075781|D17Bwg0511e|GKAP/SAPAP|GKPA/SAPAP|Gkap|Sapap1|mKIAA4162	discs, large (Drosophila) homolog-associated protein 1	protein-coding
common_peak1-15930-17-29--0.688594257403481-0.756750750680359	chr5	24908270	24909010	+	0	NA	intron (NM_001081383, intron 6 of 58)	intron (NM_001081383, intron 6 of 58)	95961	NM_001081383	231051	Mm.332268	NM_001081383	ENSMUSG00000038056	Kmt2c	E330008K23Rik|HALR|Mll3|mKIAA1506	lysine (K)-specific methyltransferase 2C	protein-coding
common_peak1-14730-20-21-0.0286431659538957-0.306080386793804	chr3	84813847	84814387	+	0	NA	Intergenic	Intergenic	-44615	NM_001040461	654362	Mm.466598	NM_001040461		Dear1	Dear|Despr	dual endothelin 1/angiotensin II receptor 1	protein-coding
common_peak2-25689-5-9--1.02630843089322-1.21398586181642	chr19	15924453	15924969	+	0	NA	Intergenic	URR1B|DNA|MER1_type	74401	NM_001205339	107272	Mm.289936	NM_177420	ENSMUSG00000024640	Psat1	D8Ertd814e|EPIP|PSA|Psat	phosphoserine aminotransferase 1	protein-coding
common_peak2-28123-14-15--0.100783839642355-0.301029995663982	chr4	89359682	89360357	+	0	NA	3' UTR (NM_175647, exon 2 of 2)	3' UTR (NM_175647, exon 2 of 2)	5130	NM_175647	242523	Mm.130167	NM_175647	ENSMUSG00000043753	Dmrta1	Dmrt4	doublesex and mab-3 related transcription factor like family A1	protein-coding
common_peak2-31746-12-26--1.10611151707583-1.26025077975594	chr9	18292154	18292743	+	0	NA	Intergenic	L1_Mus3|LINE|L1	9609	NM_028557	73503	Mm.160088	NM_028557	ENSMUSG00000038691	Mbd3l1	1700070G05Rik|1700095H13Rik|Mbd3l	methyl-CpG binding domain protein 3-like 1	protein-coding
unique_peak1-5485-8-5-0.420259917226415-1.10484139239135	chr5	130345413	130345946	+	0	NA	intron (NM_011079, intron 4 of 9)	intron (NM_011079, intron 4 of 9)	9275	NM_011079	18682	Mm.3159	NM_011079	ENSMUSG00000025537	Phkg1	Phkg	phosphorylase kinase gamma 1	protein-coding
common_peak1-19394-9-14--0.717277189204299-0.53895475198017	chrX	48453565	48454091	+	0	NA	Intergenic	RLTR12A|LTR|ERVK	-82633	NM_172413	72065	Mm.43152	NM_172413	ENSMUSG00000050029	Rap2c	2010200P20Rik|AI194294|AL022976	RAP2C, member of RAS oncogene family	protein-coding
unique_peak2-36056-12-16--0.4386868561627-0.368541233333383	chr19	47050176	47050989	+	0	NA	intron (NM_001164363, intron 1 of 17)	PB1|SINE|Alu	-6525	NM_001164365	76952	Mm.40965	NM_029810	ENSMUSG00000025041	Nt5c2	2010002I23Rik|CnII|ENSMUSG00000025039|Gm9751|Gmp|Nt5b|Pnt5|cN-II	5'-nucleotidase, cytosolic II	protein-coding
common_peak1-10357-37-57--0.331987923641753-0.556612435105728	chr13	86045841	86046917	+	0	NA	Intergenic	L1MA4|LINE|L1	140021	NM_007749	12867	Mm.378898	NM_007749		Cox7c	COXVIIc|Cox7c1	cytochrome c oxidase subunit VIIc	protein-coding
common_peak1-18700-20-14-0.581184188982674-0.690311289528838	chr8	121668009	121668875	+	0	NA	intron (NM_019707, intron 7 of 13)	intron (NM_019707, intron 7 of 13)	-199996	NM_024219	68196	Mm.358714	NM_024219	ENSMUSG00000031839	Hsbp1	0610007A03Rik|AA408769|Hsp25	heat shock factor binding protein 1	protein-coding
unique_peak2-39273-3-7--1.41398308995928-1.23214870625617	chr8	121620483	121621002	+	0	NA	intron (NM_019707, intron 7 of 13)	intron (NM_019707, intron 7 of 13)	-247696	NM_024219	68196	Mm.358714	NM_024219	ENSMUSG00000031839	Hsbp1	0610007A03Rik|AA408769|Hsp25	heat shock factor binding protein 1	protein-coding
common_peak2-24330-92-143--0.0775729177395474-0.33917096843448	chr17	3113875	3115873	+	0	NA	promoter-TSS (NM_134123)	promoter-TSS (NM_134123)	-98	NM_134123	106583	Mm.124373	NM_134123	ENSMUSG00000046201	Scaf8	A630086M08Rik|A930036P18Rik|AA408306|AI447644|AI448652|AU015035|Rbm16|mKIAA1116	SR-related CTD-associated factor 8	protein-coding
common_peak1-13288-30-12-1.46923569135078-3.02795537370072	chr19	38039423	38040808	+	0	NA	intron (NM_001099634, intron 18 of 52)	intron (NM_001099634, intron 18 of 52)	77952	NM_001099634	226101	Mm.34674	NM_177035	ENSMUSG00000048612	Myof	2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3	myoferlin	protein-coding
common_peak1-16330-16-11-0.533301141546906-0.58239619684445	chr5	117278690	117279385	+	0	NA	Intergenic	MIRb|SINE|MIR	-237211	NM_026886	68955	Mm.146779	NM_026886	ENSMUSG00000063919	Srrm4	1500001A10Rik|B230202K19Rik|bv|mKIAA1853|nSR100	serine/arginine repetitive matrix 4	protein-coding
common_peak2-30771-5-10--1.16381195464315-1.33892459842472	chr7	125491506	125491919	+	0	NA	Intergenic	L1MA4|LINE|L1	95354	NM_138649	110058	Mm.156558	NM_138649	ENSMUSG00000058420	Syt17	Bk	synaptotagmin XVII	protein-coding
common_peak2-28561-34-57--0.475912468126306-0.796452271284518	chr5	5418383	5419477	+	0	NA	Intergenic	Intergenic	-38679	NM_011074	18647	Mm.389061	NM_011074	ENSMUSG00000028926	Cdk14	Pftk1|mKIAA0834	cyclin-dependent kinase 14	protein-coding
unique_peak1-7052-13-2-2.19350952991661-3.03832868024006	chr9	75382421	75383060	+	0	NA	intron (NM_016963, intron 1 of 9)	MTC|LTR|MaLR	24724	NM_016963	50875	Mm.38445	NM_016963	ENSMUSG00000058587	Tmod3	U-Tmod|UTMOD	tropomodulin 3	protein-coding
unique_peak1-1081-10-3-1.35641534500877-1.75805390616669	chr11	86651733	86652245	+	0	NA	Intergenic	Intergenic	-30827	NM_026191	67487	Mm.260627	NM_026191	ENSMUSG00000018425	Dhx40	2410016C14Rik|ARG147|DDX40|PAD	DEAH (Asp-Glu-Ala-His) box polypeptide 40	protein-coding
common_peak1-15679-8-4-0.683294323060208-1.21878474469819	chr4	137929259	137929771	+	0	NA	Intergenic	MLT1K|LTR|MaLR	-5645	NM_028176	72269	Mm.46182	NM_028176	ENSMUSG00000028755	Cda	2210401N16Rik	cytidine deaminase	protein-coding
common_peak1-9242-174-182-0.683039105338187-6.07750619122213	chr11	86575008	86580979	+	0	NA	Intergenic	ORR1D2|LTR|MaLR	-6999	NM_001003908	67300	Mm.254588	NM_001003908	ENSMUSG00000047126	Cltc	3110065L21Rik|CHC|R74732	clathrin, heavy polypeptide (Hc)	protein-coding
unique_peak2-34243-4-11--1.6084230145744-1.68134727924692	chr13	55185900	55186687	+	0	NA	intron (NM_001293660, intron 3 of 12)	Charlie8|DNA|MER1_type	15363	NM_011307	20184	Mm.259301	NM_011307	ENSMUSG00000025878	Uimc1	9430016E08Rik|D330018D10Rik|D630032M02Rik|RIP110|Rxrip110	ubiquitin interaction motif containing 1	protein-coding
unique_peak2-37533-0-8--4.01005593191652-2.05605744720049	chr5	24600412	24600951	+	0	NA	intron (NM_145401, intron 1 of 15)	(TA)n|Simple_repeat|Simple_repeat	5779	NM_145401	108099	Mm.33649	NM_145401	ENSMUSG00000028944	Prkag2	2410051C13Rik|AAKG|AAKG2|AI854673|H91620p|WPWS	protein kinase, AMP-activated, gamma 2 non-catalytic subunit	protein-coding
common_peak2-26624-21-16-0.482026424015896-0.650819692678078	chr2	118745731	118746581	+	0	NA	intron (NM_001045523, intron 4 of 6)	intron (NM_001045523, intron 4 of 6)	-6077	NM_028117	72136	Mm.486238	NM_028117	ENSMUSG00000074916	Chst14	2600016L03Rik|D4ST-1|D4st1	carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	protein-coding
common_peak2-29414-42-42-0.316064573165086-0.62760443475974	chr6	146701940	146702942	+	0	NA	intron (NM_172734, intron 1 of 13)	intron (NM_172734, intron 1 of 13)	28989	NM_172734	232533	Mm.322121	NM_172734	ENSMUSG00000001630	Stk38l	4930473A22Rik|B230328I19|Ndr2|Ndr54	serine/threonine kinase 38 like	protein-coding
common_peak1-18160-14-11-0.314253659636488-0.435191258261915	chr8	13158463	13159033	+	0	NA	promoter-TSS (NM_010684)	promoter-TSS (NM_010684)	-387	NM_010684	16783	Mm.16716	NM_010684	ENSMUSG00000031447	Lamp1	AI196048|CD107a|Lamp-1	lysosomal-associated membrane protein 1	protein-coding
common_peak1-15365-85-108-0.187218923347725-0.540831047726678	chr4	58911331	58913030	+	0	NA	intron (NM_172381, intron 1 of 48)	intron (NM_172381, intron 1 of 48)	13417	NM_172381	230249	Mm.234801	NM_172381	ENSMUSG00000050812	AI314180	AW558785|BB181316|mKIAA0368	expressed sequence AI314180	protein-coding
unique_peak1-2315-9-5-0.604650905683064-1.21398586181642	chr15	82160860	82161373	+	0	NA	exon (NM_008669, exon 9 of 10)	exon (NM_008669, exon 9 of 10)	8140	NM_008669	17939	Mm.20325	NM_008669	ENSMUSG00000022453	Naga	-	N-acetyl galactosaminidase, alpha	protein-coding
unique_peak2-37200-3-13--2.22133801201688-2.36932189928148	chr4	60081703	60081972	+	0	NA	exon (NM_001134675, exon 3 of 7)	exon (NM_001134675, exon 3 of 7)	1510	NM_001134675	100041658	Mm.457982	NM_001134675	ENSMUSG00000073842	Mup7	Gm12546|Mup3|OTTMUSG00000007428	major urinary protein 7	protein-coding
common_peak1-10316-18-30--0.641277159158523-0.738267116931589	chr13	69533966	69534750	+	0	NA	Intergenic	RLTR9B2|LTR|ERVK	138384	NM_198600	210106	Mm.315959	NM_198600	ENSMUSG00000034575	Papd7	LAK-1|POLK|Pols|TRF4|TRF4-1	PAP associated domain containing 7	protein-coding
unique_peak1-3092-11-2-1.92373108353046-2.32232533660526	chr18	24997068	24997593	+	0	NA	intron (NM_001289654, intron 3 of 24)	intron (NM_001289654, intron 3 of 24)	130206	NM_001289655	225288	Mm.329322	NM_175276	ENSMUSG00000034295	Fhod3	A930009H06Rik|FHOS2|mKIAA1695	formin homology 2 domain containing 3	protein-coding
unique_peak2-34829-5-15--1.70438033600585-1.4372489031793	chr15	75049332	75050110	+	0	NA	Intergenic	RMER17B|LTR|ERVK	-49130	NM_008530	17071	Mm.377095	NM_008530	ENSMUSG00000022583	Ly6f	-	lymphocyte antigen 6 complex, locus F	protein-coding
unique_peak1-656-10-3-1.35641534500877-1.75805390616669	chr10	59629356	59629885	+	0	NA	Intergenic	Intergenic	40096	NR_105871	102465546		NR_105871		Mir6906	mmu-mir-6906	microRNA mir-6906	ncRNA
unique_peak1-3850-7-0-2.79909083029819-2.40823996531185	chr2	5315746	5316222	+	0	NA	intron (NM_001290374, intron 2 of 9)	intron (NM_001290374, intron 2 of 9)	257162	NM_028804	74186	Mm.274715	NM_028804	ENSMUSG00000026676	Ccdc3	2310045O21Rik	coiled-coil domain containing 3	protein-coding
common_peak1-12944-89-122-0.0924522494867626-0.370566114393641	chr19	37206747	37208496	+	0	NA	intron (NM_001290829, intron 3 of 9)	intron (NM_001290829, intron 3 of 9)	-40712	NR_045329	319931	Mm.446730	NR_045329	ENSMUSG00000097591	A330032B11Rik	-	RIKEN cDNA A330032B11 gene	ncRNA
common_peak1-17693-35-62--0.545909665037413-1.05173147685246	chr7	70350609	70351792	+	0	NA	intron (NM_007390, intron 2 of 9)	L1MC1|LINE|L1	6212	NM_007390	11441	Mm.113464	NM_007390	ENSMUSG00000030525	Chrna7	Acra7|alpha7	cholinergic receptor, nicotinic, alpha polypeptide 7	protein-coding
unique_peak1-3409-8-3-1.00522241794757-1.39487600375387	chr19	5722942	5723391	+	0	NA	intron (NM_001114595, intron 1 of 17)	intron (NM_001114595, intron 1 of 17)	3151	NM_001114595	114601	Mm.210447	NM_053252	ENSMUSG00000024937	Ehbp1l1	G430002G23Rik	EH domain binding protein 1-like 1	protein-coding
common_peak1-17527-15-26--0.742722751607812-0.823046386575433	chr7	28378334	28379154	+	0	NA	intron (NM_001110208, intron 1 of 13)	intron (NM_001110208, intron 1 of 13)	2165	NM_001110208	11652	Mm.177194	NM_007434	ENSMUSG00000004056	Akt2	2410016A19Rik|AW554154|PKB|PKBbeta	thymoma viral proto-oncogene 2	protein-coding
common_peak2-24463-15-5-1.4272022498345-1.61682445937017	chr17	24007817	24008176	+	0	NA	intron (NM_020487, intron 4 of 5)	B3|SINE|B2	2957	NM_020487	57256	Mm.386785	NM_020487	ENSMUSG00000024116	Prss21	1700023E12Rik|TESP5|mT4|testisin	protease, serine 21	protein-coding
common_peak1-13865-12-11-0.0638134843664826-0.337263207250336	chr2	69862046	69862752	+	0	NA	TTS (NM_001081548)	TTS (NM_001081548)	-14784	NM_177376	329421	Mm.99648	NM_177376	ENSMUSG00000042064	Myo3b	A430065P19Rik	myosin IIIB	protein-coding
common_peak2-20717-21-33--0.517973575984104-0.610902792227722	chr10	95388383	95389661	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-14275	NM_001001932	216238	Mm.210035	NM_001001932	ENSMUSG00000036499	Eea1	A430109M19Rik|B230358H09Rik|ZFYVE2	early endosome antigen 1	protein-coding
unique_peak1-6143-8-4-0.683294323060208-1.21878474469819	chr6	135055612	135056180	+	0	NA	TTS (NM_053118)	TTS (NM_053118)	12405	NM_053118	93746	Mm.49902	NM_053118	ENSMUSG00000030205	Gprc5d	-	G protein-coupled receptor, family C, group 5, member D	protein-coding
unique_peak1-6779-12-3-1.64877598508764-2.36932189928148	chr8	62417463	62418142	+	0	NA	Intergenic	Intergenic	-567119	NM_011834	23923	Mm.35020	NM_011834	ENSMUSG00000057228	Aadat	AI875679|Aadt|KATII|Kat2|mKat-2	aminoadipate aminotransferase	protein-coding
common_peak1-11429-9-6-0.382258484346616-1.11707584880836	chr15	99817839	99818473	+	0	NA	intron (NM_001284521, intron 4 of 15)	intron (NM_001284521, intron 4 of 15)	-14438	NR_028124	70281	Mm.484037	NR_028124		2310068J16Rik	-	RIKEN cDNA 2310068J16 gene	ncRNA
unique_peak2-36713-6-13--1.2419568116773-1.58711810488664	chr3	51888181	51888934	+	0	NA	intron (NM_001004176, intron 1 of 4)	intron (NM_001004176, intron 1 of 4)	20371	NM_001004176	433586	Mm.234972	NM_001004176	ENSMUSG00000061143	Maml3	AV234550|BC049812|Mam-2|mKIAA1816	mastermind like 3 (Drosophila)	protein-coding
common_peak1-8924-83-116-0.0438579055227217-0.323937522245888	chr11	51999844	52001156	+	0	NA	Intergenic	Intergenic	26989	NM_207253	276865	Mm.377871	NM_207253	ENSMUSG00000060170	Olfr1371	GA_x6K02T2QP88-3214035-3214970|MOR256-58	olfactory receptor 1371	protein-coding
common_peak2-23375-16-10-0.658832023630764-0.699649909729472	chr15	55187552	55188116	+	0	NA	intron (NM_181277, intron 5 of 47)	intron (NM_181277, intron 5 of 47)	48529	NM_181277	12818	Mm.297859	NM_181277	ENSMUSG00000022371	Col14a1	5730412L22Rik|AW108078	collagen, type XIV, alpha 1	protein-coding
common_peak1-14698-36-100--1.17889039658404-4.9465821627604	chr3	69004635	69006438	+	0	NA	Intergenic	ORR1A2-int|LTR|MaLR	-20805	NM_027843	71619	Mm.98122	NM_027843	ENSMUSG00000098207	Arl14	9130014L17Rik|Arf7	ADP-ribosylation factor-like 14	protein-coding
common_peak2-22578-12-10-0.189344366450341-0.386243247519795	chr13	67305929	67306594	+	0	NA	intron (NM_001048204, intron 3 of 3)	intron (NM_001048204, intron 3 of 3)	10819	NM_001048204	218311	Mm.82396	NM_183156	ENSMUSG00000051037	Zfp455	3732412P20Rik|Rslcan-10	zinc finger protein 455	protein-coding
common_peak1-9631-23-12-1.02132778636799-1.44787515926925	chr12	16842150	16843173	+	0	NA	Intergenic	Lx2B|LINE|L1	24890	NM_033270	50496	Mm.23296	NM_033270	ENSMUSG00000057469	E2f6	AI462434|E2F6b|EMA	E2F transcription factor 6	protein-coding
unique_peak2-33854-4-11--1.6084230145744-1.68134727924692	chr12	17303962	17304378	+	0	NA	intron (NM_133699, intron 6 of 13)	intron (NM_133699, intron 6 of 13)	27366	NM_133699	68775	Mm.178798	NM_133699	ENSMUSG00000020566	Atp6v1c2	1110038G14Rik	ATPase, H+ transporting, lysosomal V1 subunit C2	protein-coding
common_peak2-24811-6-7--0.434601889619698-0.97990265578305	chr17	70739371	70739800	+	0	NA	Intergenic	Intergenic	-34547	NM_177639	224997	Mm.311840	NM_027712	ENSMUSG00000003279	Dlgap1	4933422O14Rik|9630002F18|AI845682|AI848168|BB075781|D17Bwg0511e|GKAP/SAPAP|GKPA/SAPAP|Gkap|Sapap1|mKIAA4162	discs, large (Drosophila) homolog-associated protein 1	protein-coding
common_peak1-7786-26-21-0.468467473521165-0.647723624534446	chr1	97769562	97770857	+	0	NA	Intergenic	Intergenic	148126	NR_040467	73454	Mm.396229	NR_040467		1700063A18Rik	-	RIKEN cDNA 1700063A18 gene	ncRNA
unique_peak1-1933-9-4-0.867685311516858-1.36011389749466	chr14	76697874	76698392	+	0	NA	Intergenic	Intergenic	-117495	NM_207652	21807	Mm.153272	NM_009366	ENSMUSG00000022010	Tsc22d1	AA589566|AW105905|Egr5|TSC-22|Tgfb1i4|Tsc|Tsc22	TSC22 domain family, member 1	protein-coding
common_peak1-14491-15-13-0.204809828498052-0.368541233333383	chr3	9752127	9752846	+	0	NA	5' UTR (NM_053182, exon 2 of 8)	5' UTR (NM_053182, exon 2 of 8)	81193	NM_053182	94212	Mm.23897	NM_053182	ENSMUSG00000027508	Pag1	Cbp|F730007C19Rik|Pag	phosphoprotein associated with glycosphingolipid microdomains 1	protein-coding
unique_peak2-35167-2-6--1.72480917832092-1.26211192963361	chr16	34926760	34927078	+	0	NA	intron (NM_139300, intron 16 of 31)	intron (NM_139300, intron 16 of 31)	12496	NR_040536	76649	Mm.420532	NR_040536		1700119H24Rik	-	RIKEN cDNA 1700119H24 gene	ncRNA
unique_peak2-32438-5-6--0.511735258063458-0.947717972411649	chr1	168427275	168427745	+	0	NA	intron (NM_001164306, intron 1 of 7)	intron (NM_001164306, intron 1 of 7)	209	NM_001164306	226601	Mm.475593	NM_001164306	ENSMUSG00000086056	Gm4846	EG226601|Fmo13	predicted gene 4846	protein-coding
unique_peak1-5858-10-0-3.35641534500877-3.31132995230379	chr6	84216938	84217572	+	0	NA	Intergenic	Intergenic	156577	NR_046063	100038556	Mm.387783	NR_046063		Gm10445	ENSMUSG00000072956	predicted gene 10445	ncRNA
common_peak2-28722-50-55-0.233585394421349-0.518477330661964	chr5	36073970	36075401	+	0	NA	Intergenic	Intergenic	-2760	NM_194344	231147	Mm.290429	NM_194344	ENSMUSG00000036553	Sh3tc1	4631428G15|BC024909	SH3 domain and tetratricopeptide repeats 1	protein-coding
unique_peak2-36559-6-11--1.01956439034085-1.32595962126035	chr2	168413613	168414283	+	0	NA	intron (NM_001291172, intron 1 of 6)	intron (NM_001291172, intron 1 of 6)	1917	NM_001291178	18019	Mm.116802	NM_010899	ENSMUSG00000027544	Nfatc2	AI607462|NF-ATc2|NF-ATp|NFAT1|NFAT1-D|Nfatp	nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 2	protein-coding
unique_peak2-39108-6-18--1.68252940306328-1.66449268468235	chr8	79588641	79589595	+	0	NA	intron (NM_001083906, intron 2 of 8)	intron (NM_001083906, intron 2 of 8)	162711	NM_001083906	110784	Mm.324393	NM_001083906	ENSMUSG00000031618	Nr3c2	MR|Mlr	nuclear receptor subfamily 3, group C, member 2	protein-coding
unique_peak2-34684-1-6--2.43441193227435-1.56314192529759	chr15	13143525	13143841	+	0	NA	Intergenic	Intergenic	-40289	NM_007666	12563	Mm.57048	NM_007666	ENSMUSG00000039385	Cdh6	K-cadherin|cad6|cadherin-6	cadherin 6	protein-coding
common_peak1-15908-18-9-0.990991056340989-1.23014042908325	chr5	21736899	21737674	+	0	NA	intron (NM_011261, intron 2 of 63)	AT_rich|Low_complexity|Low_complexity	113237	NM_011261	19699	Mm.425236	NM_011261	ENSMUSG00000042453	Reln	reeler|rl	reelin	protein-coding
common_peak2-21584-14-22--0.624345795699369-0.590343908676233	chr11	98149087	98149814	+	0	NA	Intergenic	MIRb|SINE|MIR	25530	NR_039579	100628613		NR_039579	miRBase:MI0018028	Mir5119	mmu-mir-5119|mu-mir-5119	microRNA 5119	ncRNA
unique_peak1-6113-20-3-2.48807478459119-3.8429424127101	chr6	128274870	128275652	+	0	NA	intron (NM_011657, intron 8 of 10)	intron (NM_011657, intron 8 of 10)	-24430	NM_011567	21679	Mm.14774	NM_011567	ENSMUSG00000030353	Tead4	ETFR-2|Etfr2|FR-19|Rtef1|TEAD-4|TEF-3|Tcf13r1|Tef3|Tefr|Tefr1|Tefr1a	TEA domain family member 4	protein-coding
common_peak1-10161-52-40-0.750707985647615-1.9967981614991	chr13	37777898	37779459	+	0	NA	Intergenic	B1_Mur2|SINE|Alu	-139229	NM_026830	68750	Mm.491109	NM_026830	ENSMUSG00000039087	Rreb1	1110037N09Rik|AA414966|B930013M22Rik	ras responsive element binding protein 1	protein-coding
common_peak2-31759-31-36-0.0157853051841732-0.304004708442489	chr9	21072823	21073861	+	0	NA	intron (NM_153583, intron 5 of 9)	intron (NM_153583, intron 5 of 9)	3613	NM_153583	235040	Mm.440165	NM_153583	ENSMUSG00000002820	Atg4d	9830134P12Rik|APG4-D|Apg4d|Atg4dl|Autl4	autophagy related 4D, cysteine peptidase	protein-coding
common_peak2-28203-53-64-0.118605199387474-0.379881757498728	chr4	117124964	117126950	+	0	NA	intron (NM_025739, intron 2 of 14)	intron (NM_025739, intron 2 of 14)	43563	NM_025739	66743	Mm.318331	NM_025739	ENSMUSG00000028677	Rnf220	4732477A13|4931406I20Rik|5730503K05Rik|AV302541	ring finger protein 220	protein-coding
common_peak1-15510-12-8-0.478850983645327-0.562038191119709	chr4	116677650	116678287	+	0	NA	TTS (NM_175244)	TTS (NM_175244)	10015	NM_175244	76608	Mm.251420	NM_175244	ENSMUSG00000046861	Hectd3	1700064K09Rik|AI467540|AW743312	HECT domain containing 3	protein-coding
unique_peak2-37473-8-23--1.57974008277359-1.94520747672513	chr5	3322558	3323260	+	0	NA	Intergenic	Intergenic	-21403	NM_009873	12571	Mm.31672	NM_009873	ENSMUSG00000040274	Cdk6	5830411I20|AI504062|Crk2	cyclin-dependent kinase 6	protein-coding
common_peak2-29606-66-108--0.249700660351085-0.579275704045706	chr6	52713564	52714515	+	0	NA	intron (NM_025816, intron 16 of 17)	intron (NM_025816, intron 16 of 17)	50316	NM_025816	52440	Mm.389757	NM_025816	ENSMUSG00000004535	Tax1bp1	1200003J11Rik|1700069J21Rik|AA930106|D6Ertd404e|D6Ertd772e|T6bp|TXBP151	Tax1 (human T cell leukemia virus type I) binding protein 1	protein-coding
unique_peak2-34048-5-8--0.874305337448166-1.10484139239135	chr12	113014552	113014914	+	0	NA	intron (NM_001025360, intron 4 of 15)	intron (NM_001025360, intron 4 of 15)	17654	NM_001025361	16593	Mm.278357	NM_008450	ENSMUSG00000021288	Klc1	AI874768|Kns2	kinesin light chain 1	protein-coding
common_peak2-30493-8-8--0.164702583494742-1.00793137938329	chr7	60492158	60492694	+	0	NA	Intergenic	L1Md_F2|LINE|L1	654833	NR_105746	102466619		NR_105746	miRBase:MI0021585	Mir6238	mmu-mir-6238	microRNA mir-6238	ncRNA
common_peak2-21282-18-23--0.272043349492805-0.34651636097721	chr11	70409483	70410264	+	0	NA	intron (NM_176893, intron 1 of 31)	intron (NM_176893, intron 1 of 31)	-19523	NM_001145537	668433	Mm.425687	NM_001145537	ENSMUSG00000087279	4930544D05Rik	-	RIKEN cDNA 4930544D05 gene	protein-coding
common_peak2-28893-119-147-0.328984555501094-1.29514462667953	chr5	90365347	90367312	+	0	NA	Intergenic	Intergenic	-53970	NM_001081401	330119	Mm.133062	NM_177872	ENSMUSG00000043635	Adamts3	1100001H14Rik|6330442E02Rik	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 3	protein-coding
common_peak1-16987-20-12-0.787635066450101-0.949240599462708	chr6	87672273	87673218	+	0	NA	Intergenic	Intergenic	-8118	NM_001159697	58229	Mm.333229	NM_021418	ENSMUSG00000068263	Efcc1	Ccdc48	EF hand and coiled-coil domain containing 1	protein-coding
common_peak1-16246-9-4-0.867685311516858-1.36011389749466	chr5	104403681	104404241	+	0	NA	intron (NM_198030, intron 1 of 6)	L1MA4A|LINE|L1	2446	NM_198030	243168	Mm.284944	NM_198030	ENSMUSG00000034528	Hsd17b13	AI047820|PAN1B-like|Pan1b	hydroxysteroid (17-beta) dehydrogenase 13	protein-coding
unique_peak2-39248-2-7--1.91745425626332-1.45399745587252	chr8	115783013	115783439	+	0	NA	Intergenic	Intergenic	192064	NR_033584	791378	Mm.350576	NR_033584		Gm10280	ENSMUSG00000069883	predicted gene 10280	ncRNA
common_peak1-17685-37-32-0.481598952127365-0.849650211186447	chr7	66591378	66592799	+	0	NA	Intergenic	Intergenic	-12569	NR_015479	330544	Mm.9002	NR_015479		C230091D08Rik	-	RIKEN cDNA C230091D08 gene	ncRNA
common_peak2-28877-9-16--0.897849434846119-0.732381977911291	chr5	81019588	81020106	+	0	NA	Intergenic	L2|LINE|L2	-430771	NM_198702	319387	Mm.273631	NM_198702	ENSMUSG00000037605	Lphn3	5430402I23Rik|CIRL-3|D130075K09Rik|Gm1379|LEC3|mKIAA0768	latrophilin 3	protein-coding
unique_peak2-39920-1-6--2.43441193227435-1.56314192529759	chrX	102113251	102113662	+	0	NA	Intergenic	LTRIS_Mus|LTR|ERV1	-60850	NM_053206	272790	Mm.165776	NM_053206	ENSMUSG00000031224	Magee2	9630059J11Rik|BB131182|Mage-e2	melanoma antigen, family E, 2	protein-coding
common_peak2-20878-54-88--0.302647669336664-0.649046969219241	chr11	116030111	116031587	+	0	NA	Intergenic	Intergenic	-1357	NM_172571	217335	Mm.35241	NM_172571	ENSMUSG00000020776	Fbf1	1110033G01Rik|5930413D20|mKIAA1863	Fas (TNFRSF6) binding factor 1	protein-coding
unique_peak1-1348-12-6-0.841421063030034-1.58711810488664	chr12	17209472	17210137	+	0	NA	Intergenic	Intergenic	-26110	NM_201531	382571	Mm.40173	NM_201531	ENSMUSG00000051726	Kcnf1	Gm1182|Kv5.1	potassium voltage-gated channel, subfamily F, member 1	protein-coding
common_peak1-18773-58-48-0.681240090775288-1.96088648955617	chr8	126851969	126853331	+	0	NA	intron (NM_139272, intron 7 of 15)	intron (NM_139272, intron 7 of 15)	97356	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
common_peak1-9037-15-11-0.4272022498345-0.503257505534083	chr11	62602006	62602705	+	0	NA	intron (NM_138949, intron 2 of 5)	intron (NM_138949, intron 2 of 5)	564	NM_138949	192651	Mm.168530	NM_138949	ENSMUSG00000047342	Zfp286	BC027023	zinc finger protein 286	protein-coding
common_peak1-16300-14-14--0.00767443525087419-0.308519316180257	chr5	113993106	113993675	+	0	NA	intron (NM_177292, intron 1 of 8)	intron (NM_177292, intron 1 of 8)	73923	NM_177292	320916	Mm.102783	NM_177292	ENSMUSG00000063430	Wscd2	4933413A10Rik|C530024P05Rik|Gm450	WSC domain containing 2	protein-coding
unique_peak2-33363-3-6--1.22133801201688-1.08602067057793	chr11	32358983	32359339	+	0	NA	intron (NM_173784, intron 1 of 2)	intron (NM_173784, intron 1 of 2)	3789	NM_173784	327900	Mm.260956	NM_173784		Ubtd2	4930571L24|9630054F20Rik|AI645720	ubiquitin domain containing 2	protein-coding
unique_peak1-2396-7-2-1.21412832957703-1.45399745587252	chr15	98121678	98122057	+	0	NA	intron (NM_173769, intron 3 of 5)	intron (NM_173769, intron 3 of 5)	4647	NM_173769	239652	Mm.207453	NM_173769	ENSMUSG00000022987	Zfp641	9930016F01Rik|Znf641	zinc finger protein 641	protein-coding
common_peak2-25891-49-54-0.224924109500524-0.485273987300002	chr19	45047535	45048898	+	0	NA	intron (NM_001081225, intron 17 of 19)	intron (NM_001081225, intron 17 of 19)	10824	NR_040294	73894	Mm.491408	NR_040294		4930414N06Rik	-	RIKEN cDNA 4930414N06 gene	ncRNA
common_peak2-27936-33-36-0.121884196896579-0.346766333527252	chr4	22357360	22358323	+	0	NA	intron (NR_104380, intron 8 of 8)	intron (NR_104380, intron 8 of 8)	57672	NM_008899	18992	Mm.129387	NM_008899	ENSMUSG00000095139	Pou3f2	9430075J19Rik|A230098E07Rik|Brn-2|Brn2|OTF-7|Otf7|oct-7	POU domain, class 3, transcription factor 2	protein-coding
unique_peak2-37669-8-8--0.164702583494742-1.00793137938329	chr5	93005549	93005932	+	0	NA	intron (NM_001170571, intron 2 of 4)	RSINE1|SINE|B4	5177	NM_001170571	384198	Mm.76757	NM_001033478	ENSMUSG00000057068	Fam47e	C730043O17|Gm1381	family with sequence similarity 47, member E	protein-coding
common_peak2-32038-12-25--1.05166373305345-1.1381569562463	chr9	78448170	78448802	+	0	NA	Intergenic	Intergenic	-12634	NM_001276452	235504	Mm.46932	NM_172773	ENSMUSG00000049624	Slc17a5	4631416G20Rik|4732491M05|AST|ISSD|NSD|SD|SIALIN|SIASD|SLD	solute carrier family 17 (anion/sugar transporter), member 5	protein-coding
common_peak2-31604-33-38-0.0459353436632801-0.312166972154323	chr8	122376380	122377361	+	0	NA	Intergenic	B3A|SINE|B2	-9335	NM_146219	234796	Mm.86446	NM_146219	ENSMUSG00000031828	Klhl36	-	kelch-like 36	protein-coding
common_peak2-20901-21-12-0.869049547125143-1.18646456559501	chr11	4302414	4302880	+	0	NA	intron (NM_029458, intron 10 of 10)	intron (NM_029458, intron 10 of 10)	38438	NM_029458	75828	Mm.159592	NM_029458	ENSMUSG00000020419	Hormad2	4930529M09Rik	HORMA domain containing 2	protein-coding
unique_peak1-1937-9-3-1.18961340640422-1.57096726280955	chr14	78319229	78319759	+	0	NA	intron (NM_178825, intron 1 of 6)	intron (NM_178825, intron 1 of 6)	15448	NM_029495	108670	Mm.68134	NM_029495	ENSMUSG00000022014	Epsti1	2310046K10Rik|5033415K03Rik|BRESI1	epithelial stromal interaction 1 (breast)	protein-coding
unique_peak2-36004-3-5--0.998945590680433-0.96108193396963	chr19	38096786	38096994	+	0	NA	intron (NM_001099634, intron 3 of 52)	intron (NM_001099634, intron 3 of 52)	21177	NM_001099634	226101	Mm.34674	NM_177035	ENSMUSG00000048612	Myof	2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3	myoferlin	protein-coding
common_peak1-14238-12-9-0.326847890200276-0.459837087125828	chr2	153270081	153270735	+	0	NA	promoter-TSS (NM_001001986)	promoter-TSS (NM_001001986)	-193	NM_001001986	329540	Mm.50600	NM_001001986	ENSMUSG00000061411	Nol4l	4931410H15|8430427H17Rik|AI429157|Gm1636	nucleolar protein 4-like	protein-coding
unique_peak2-38345-8-14--0.901668177660948-0.660903317613906	chr7	127090591	127091186	+	0	NA	Intergenic	Lx8|LINE|L1	47263	NR_104377	73919	Mm.46381	NM_029610	ENSMUSG00000030922	Lyrm1	1110065L10Rik|2310004B22Rik|4930404J24Rik	LYR motif containing 1	protein-coding
common_peak2-26876-83-132--0.141059810395063-0.40491576863193	chr2	156392081	156393059	+	0	NA	intron (NM_001164818, intron 4 of 4)	intron (NM_001164818, intron 4 of 4)	19258	NM_001164818	68295	Mm.253648	NM_026661	ENSMUSG00000027628	Aar2	0610011L14Rik	AAR2 splicing factor homolog (S. cerevisiae)	protein-coding
common_peak2-20484-43-66--0.283526004934069-0.518477330661964	chr10	50591833	50593404	+	0	NA	Intergenic	Intergenic	-22839	NM_011376	20464	Mm.4774	NM_011376	ENSMUSG00000019913	Sim1	bHLHe14|mSIM1	single-minded homolog 1 (Drosophila)	protein-coding
unique_peak1-1225-9-2-1.60465090568306-1.87199725847353	chr11	109343942	109344427	+	0	NA	intron (NM_028710, intron 1 of 13)	B2_Mm2|SINE|B2	-9274	NM_001029842	104681	Mm.265874	NM_134038	ENSMUSG00000041920	Slc16a6	AW743111|ESTM12|MCT 6|MCT 7|MCT6	solute carrier family 16 (monocarboxylic acid transporters), member 6	protein-coding
unique_peak1-5343-11-1-2.50869358425161-2.83420869758413	chr5	91205502	91206092	+	0	NA	Intergenic	Lx|LINE|L1	4336	NM_019932	56744	Mm.332490	NM_019932	ENSMUSG00000029373	Pf4	Cxcl4|Scyb4	platelet factor 4	protein-coding
unique_peak2-39680-7-12--0.901348887842903-1.31827279259406	chr9	108691665	108692193	+	0	NA	Intergenic	B3|SINE|B2	-6396	NM_029634	76500	Mm.276336	NM_029634	ENSMUSG00000032599	Ip6k2	1500005N04Rik|AW050208|Ihpk2	inositol hexaphosphate kinase 2	protein-coding
unique_peak2-39605-4-10--1.48289213249054-1.5150158574804	chr9	81632457	81633080	+	0	NA	Intergenic	Intergenic	-106609	NM_010482	15551	Mm.445308	NM_010482	ENSMUSG00000049511	Htr1b	-	5-hydroxytryptamine (serotonin) receptor 1B	protein-coding
common_peak2-20751-19-35--0.767237674780626-1.06916698217164	chr10	111576232	111577129	+	0	NA	Intergenic	Intergenic	-26052	NM_178278	353025	Mm.194428	NM_178278	ENSMUSG00000035694	Caps2	D630005B03Rik	calcyphosphine 2	protein-coding
common_peak2-19967-9-9--0.132314688483142-1.03275496310833	chr1	133164150	133164546	+	0	NA	intron (NM_019777, intron 13 of 21)	B1_Mur2|SINE|Alu	11792	NM_019777	56489	Mm.386783	NM_019777	ENSMUSG00000042349	Ikbke	AW558201|IKK-i|IKKepsilon|Ikki	inhibitor of kappaB kinase epsilon	protein-coding
common_peak1-15883-13-5-1.19350952991661-1.95509489018123	chr5	8735329	8735825	+	0	NA	intron (NM_011076, intron 23 of 27)	RLTR19-int|LTR|ERVK	-62570	NM_011075	18669	Mm.146649	NM_011075	ENSMUSG00000028970	Abcb1b	Abcb1|Mdr1|Mdr1b|Pgy-1|Pgy1|mdr	ATP-binding cassette, sub-family B (MDR/TAP), member 1B	protein-coding
common_peak1-15215-29-28-0.254309085487539-0.470271536760928	chr4	129334495	129335482	+	0	NA	intron (NM_008468, intron 3 of 13)	intron (NM_008468, intron 3 of 13)	15023	NM_008468	16650	Mm.202358	NM_008468	ENSMUSG00000003731	Kpna6	IPOA7|Kpna5|NPI-2	karyopherin (importin) alpha 6	protein-coding
common_peak2-29043-14-5-1.31425365963649-1.4372489031793	chr5	115118872	115119307	+	0	NA	TTS (NM_019821)	TTS (NM_019821)	-10659	NM_022017	63873	Mm.266450	NM_022017	ENSMUSG00000014158	Trpv4	0610033B08Rik|OTRPC4|Trp12|VR-OAC|VRL-2|VROAC	transient receptor potential cation channel, subfamily V, member 4	protein-coding
unique_peak2-36865-5-14--1.61127093161437-1.95509489018123	chr3	92080934	92081731	+	0	NA	Intergenic	L1Md_F3|LINE|L1	26763	NM_011468	20755	Mm.6853	NM_011468	ENSMUSG00000078664	Sprr2a1	Sprr2a|Sprr2a3	small proline-rich protein 2A1	protein-coding
unique_peak1-6500-19-4-2.08075923177432-3.05312482518673	chr7	114705240	114706024	+	0	NA	Intergenic	LTR16A|LTR|ERVL	-5315	NM_172907	244198	Mm.77425	NM_172907	ENSMUSG00000051041	Olfml1	6720478C22|AV321997|BC047207|MVAL564|ONT2|mONT2	olfactomedin-like 1	protein-coding
common_peak2-26336-24-33--0.294252938482622-0.390124689062463	chr2	34957714	34958948	+	0	NA	Intergenic	Intergenic	-2126	NM_001243103	98870	Mm.415380	NM_178885	ENSMUSG00000035875	AI182371	AI046667	expressed sequence AI182371	protein-coding
common_peak2-23501-12-13--0.158578936969966-0.301029995663979	chr15	76242952	76243725	+	0	NA	exon (NM_001162489, exon 10 of 31)	exon (NM_001162489, exon 10 of 31)	-20306	NR_105919	102465576		NR_105919		Mir6954	mmu-mir-6954	microRNA mir-6954	ncRNA
common_peak2-31383-17-20--0.174021084573723-0.306598483909156	chr8	85719685	85720502	+	0	NA	intron (NM_027758, intron 1 of 17)	intron (NM_027758, intron 1 of 17)	30842	NM_027758	71310	Mm.24031	NM_027758	ENSMUSG00000031709	Tbc1d9	4933431N12Rik|AI847101|AW490653|C76116	TBC1 domain family, member 9	protein-coding
common_peak2-30088-18-12-0.612479433087259-0.739965416525508	chr6	134825434	134826106	+	0	NA	intron (NM_001167699, intron 1 of 1)	intron (NM_001167699, intron 1 of 1)	12033	NR_074084	14760	Mm.4787	NM_008157	ENSMUSG00000032641	Gpr19	-	G protein-coupled receptor 19	protein-coding
unique_peak1-6456-22-8-1.47735910364509-2.29727994934156	chr7	100674438	100675651	+	0	NA	Intergenic	L1Md_A|LINE|L1	446655	NM_021427	58238	Mm.113787	NM_021427		Fam181b	A830059I20Rik|AB041569	family with sequence similarity 181, member B	protein-coding
unique_peak2-35802-6-8--0.60452689106201-1.03789460276074	chr18	60750484	60750847	+	0	NA	intron (NM_133363, intron 1 of 6)	intron (NM_133363, intron 1 of 6)	705	NM_133363	170947	Mm.159257	NM_133363		Myoz3	4833419K08Rik|Fatz-3	myozenin 3	protein-coding
unique_peak1-7022-10-2-1.77145284428761-2.09384600808989	chr8	126548888	126549364	+	0	NA	exon (NM_001029876, exon 2 of 9)	exon (NM_001029876, exon 2 of 9)	1753	NM_001029876	382038	Mm.334891	NM_001029876	ENSMUSG00000031976	Urb2	C77575|mKIAA0133	URB2 ribosome biogenesis 2 homolog (S. cerevisiae)	protein-coding
common_peak1-7553-34-47--0.20289397371989-0.362058538051628	chr1	38129034	38129818	+	0	NA	intron (NM_019570, intron 10 of 22)	intron (NM_019570, intron 10 of 22)	57081	NM_019570	56210	Mm.389103	NM_019570	ENSMUSG00000026082	Rev1	1110027I23Rik|AU022044|Rev1l	REV1 homolog (S. cerevisiae)	protein-coding
common_peak2-24532-10-13--0.450939577048835-0.386243247519795	chr17	27051283	27051731	+	0	NA	Intergenic	ORR1A2|LTR|MaLR	-2529	NM_053173	16580	Mm.491138	NM_016761	ENSMUSG00000024301	Kifc5b	Hset|KNSL2|Kifc5a	kinesin family member C5B	protein-coding
common_peak1-13006-57-50-0.593607698107434-1.55705293866515	chr19	4810997	4812515	+	0	NA	promoter-TSS (NM_019869)	promoter-TSS (NM_019869)	-122	NM_019869	56275	Mm.276338	NM_019869	ENSMUSG00000006456	Rbm14	1300007E16Rik|PSP2|Sytip|p16|p16K	RNA binding motif protein 14	protein-coding
common_peak1-8276-38-27-0.764097737240927-1.59508594240593	chr10	25426481	25427823	+	0	NA	Intergenic	Intergenic	130091	NR_045349	73803	Mm.258921	NR_045349		4930401C15Rik	-	RIKEN cDNA 4930401C15 gene	ncRNA
unique_peak1-572-10-3-1.35641534500877-1.75805390616669	chr10	96829024	96829603	+	0	NA	Intergenic	MTD|LTR|MaLR	-56799	NR_039547	100628616		NR_039547		Mir3966	mmu-mir-3966|mu-mir-3966	microRNA 3966	ncRNA
unique_peak2-39737-1-5--2.2120195109379-1.32905871926422	chr9	123237852	123238144	+	0	NA	Intergenic	PB1D10|SINE|Alu	-38060	NM_153168	102436	Mm.276076	NM_153168	ENSMUSG00000035202	Lars2	AI035546|Kiaa0028|LEURS	leucyl-tRNA synthetase, mitochondrial	protein-coding
unique_peak2-38719-8-7-0.00522241794757061-1.00793137938329	chr7	111179664	111180074	+	0	NA	Intergenic	L1Md_T|LINE|L1	-8443	NM_147072	259075	Mm.377825	NM_147072	ENSMUSG00000073932	Olfr641	MOR13-3	olfactory receptor 641	protein-coding
unique_peak2-35537-4-6--0.830815435910851-0.989110657569874	chr17	56506520	56506952	+	0	NA	intron (NM_172132, intron 5 of 22)	intron (NM_172132, intron 5 of 22)	41263	NM_172132	193796	Mm.45047	NM_172132	ENSMUSG00000024201	Kdm4b	4732474L06Rik|Jmjd2b|mKIAA0876	lysine (K)-specific demethylase 4B	protein-coding
unique_peak2-37276-4-8--1.19338551529556-1.21878474469819	chr4	115649635	115650124	+	0	NA	Intergenic	Intergenic	-37348	NM_130865	140477	Mm.213206	NM_130865	ENSMUSG00000028707	Dmbx1	Atx|Cdmx|Mbx|Otx3	diencephalon/mesencephalon homeobox 1	protein-coding
common_peak1-16286-30-34-0.0403923925469067-0.31344009820369	chr5	110879313	110880471	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-2370	NM_001142642	381668	Mm.348782	NM_028596	ENSMUSG00000043323	Fbrsl1	2410025L10Rik|AI467568|Gm1049|mKIAA1545	fibrosin-like 1	protein-coding
unique_peak1-3166-16-1-3.11826364226806-4.46429741251234	chr18	38494560	38495249	+	0	NA	intron (NM_011937, intron 2 of 6)	intron (NM_011937, intron 2 of 6)	3743	NM_011937	26384	Mm.22374	NM_011937	ENSMUSG00000052102	Gnpda1	GNPDA|Gnp1|Gnpi|oscillin	glucosamine-6-phosphate deaminase 1	protein-coding
common_peak2-25720-7-7--0.200909169701811-0.97990265578305	chr19	23140747	23141027	+	0	NA	Intergenic	PB1D10|SINE|Alu	-74829	NM_010638	16601	Mm.291595	NM_010638	ENSMUSG00000033863	Klf9	2310051E17Rik|AA589643|BTEB-1|Bteb1|ENSMUSG00000055440|Gm9971	Kruppel-like factor 9	protein-coding
unique_peak1-5674-18-4-1.99099105634099-2.82951996911245	chr6	31111583	31112247	+	0	NA	intron (NR_110471, intron 2 of 3)	intron (NR_110471, intron 2 of 3)	56559	NR_110470	232685	Mm.443019	NM_144555		Lincpint	MNCb-1768|Pint|linc-Pint	long intergenic non-protein coding RNA, Trp53 induced transcript	ncRNA
common_peak2-21363-6-8--0.60452689106201-1.03789460276074	chr11	78178758	78179078	+	0	NA	intron (NM_008238, intron 6 of 8)	intron (NM_008238, intron 6 of 8)	21192	NM_008238	15218	Mm.4496	NM_008238	ENSMUSG00000002057	Foxn1	D11Bhm185e|Fkh19|HFH-11|Hfh11|Whn|nu|nude	forkhead box N1	protein-coding
unique_peak1-5975-21-3-2.56948926526624-4.33845181153635	chr6	96116327	96117418	+	0	NA	promoter-TSS (NR_003643)	promoter-TSS (NR_003643)	-673	NR_003643	78482	Mm.391486	NM_030107	ENSMUSG00000072878	1700123L14Rik	-	nucleoporin 50 pseudogene	pseudo
common_peak1-15569-8-6-0.197867495889966-1.03789460276074	chr4	126227233	126227704	+	0	NA	Intergenic	LTR82B|Low_complexity|ERVL	-6756	NM_175554	269582	Mm.243962	NM_175554	ENSMUSG00000042489	Clspn	B130025E01|C85083|E130314M08Rik	claspin	protein-coding
unique_peak2-33214-7-10--0.660340788339108-1.12966497611638	chr10	116297344	116297882	+	0	NA	intron (NM_001033333, intron 2 of 24)	B3|SINE|B2	36322	NM_001033333	237558	Mm.336386	NM_001033333	ENSMUSG00000034057	Myrfl	Gm239	myelin regulatory factor-like	protein-coding
common_peak2-22725-8-13--0.802132504110034-0.562038191119711	chr13	106947122	106947613	+	0	NA	Intergenic	Intergenic	713594	NM_008308	15550	Mm.4716	NM_008308	ENSMUSG00000021721	Htr1a	Gpcr18	5-hydroxytryptamine (serotonin) receptor 1A	protein-coding
common_peak1-15347-14-11-0.314253659636488-0.435191258261915	chr4	53713859	53714536	+	0	NA	3' UTR (NM_001195284, exon 13 of 13)	3' UTR (NM_001195284, exon 13 of 13)	-12857	NM_139309	246179	Mm.247210	NM_139309	ENSMUSG00000028414	Fktn	D830030O17Rik|Fcmd	fukutin	protein-coding
common_peak2-28412-12-24--0.995080204687086-1.0220094258199	chr4	141425646	141426398	+	0	NA	intron (NM_025994, intron 1 of 3)	intron (NM_025994, intron 1 of 3)	4813	NM_025994	27984	Mm.395598	NM_025994	ENSMUSG00000040659	Efhd2	2600015J22Rik|AA408606|D4Wsu27e	EF hand domain containing 2	protein-coding
unique_peak1-5618-28-9-1.7310310249341-3.46696221776358	chr6	127335926	127337399	+	0	NA	Intergenic	Intergenic	-67079	NM_181402	101187	Mm.110818	NM_181402	ENSMUSG00000037997	Parp11	5330431N24Rik|AI851877|ARTD11|HIN1L	poly (ADP-ribose) polymerase family, member 11	protein-coding
unique_peak1-3580-29-5-2.52732757989395-5.79706174304447	chr19	29249146	29250278	+	0	NA	Intergenic	Intergenic	39943	NR_029778	724062		NR_029778		Mir101b	Mirn101b|mir-101b	microRNA 101b	ncRNA
unique_peak1-729-10-0-3.35641534500877-3.31132995230379	chr10	96181922	96182407	+	0	NA	Intergenic	PB1D10|SINE|Alu	102529	NM_007569	12226	Mm.23811	NM_007569	ENSMUSG00000036478	Btg1	AI426953|AW546738	B cell translocation gene 1, anti-proliferative	protein-coding
common_peak1-13366-17-38--1.06710588065721-1.70296806472143	chr19	46003568	46004378	+	0	NA	intron (NM_198296, intron 19 of 25)	ID_B1|SINE|B4	69005	NM_198296	71617	Mm.210949	NM_198296	ENSMUSG00000039901	9130011E15Rik	AI431055|AW050122	RIKEN cDNA 9130011E15 gene	protein-coding
common_peak2-28048-25-17-0.691924903902794-0.98872314135509	chr4	58574349	58575184	+	0	NA	Intergenic	RSINE1|SINE|B4	-8403	NM_010336	14745	Mm.4772	NM_010336	ENSMUSG00000038668	Lpar1	AI326300|Edg2|Gpcr26|Kdt2|lpA1|vzg-1	lysophosphatidic acid receptor 1	protein-coding
common_peak2-27427-9-9--0.132314688483142-1.03275496310833	chr3	89314596	89315038	+	0	NA	Intergenic	Intergenic	-9269	NM_080466	140493	Mm.120250	NM_080466		Kcnn3	KCa2.3|SK3|SKCA3	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	protein-coding
unique_peak1-188-9-3-1.18961340640422-1.57096726280955	chr1	77473774	77474358	+	0	NA	intron (NM_007936, intron 3 of 17)	B1_Mus2|SINE|Alu	19277	NR_105770	102465180		NR_105770		Mir6352	mmu-mir-6352	microRNA mir-6352	ncRNA
unique_peak1-5212-14-6-1.09186123830004-1.16633110333236	chr5	36071320	36071965	+	0	NA	5' UTR (NM_194344, exon 1 of 18)	5' UTR (NM_194344, exon 1 of 18)	283	NM_194344	231147	Mm.290429	NM_194344	ENSMUSG00000036553	Sh3tc1	4631428G15|BC024909	SH3 domain and tetratricopeptide repeats 1	protein-coding
unique_peak1-1627-7-7--0.200909169701811-0.97990265578305	chr13	44938820	44939335	+	0	NA	intron (NM_021878, intron 3 of 18)	intron (NM_021878, intron 3 of 18)	112437	NM_001205043	16468	Mm.25059	NM_021878	ENSMUSG00000038518	Jarid2	Jmj|jumonji	jumonji, AT rich interactive domain 2	protein-coding
common_peak1-16205-55-94--0.365235737178246-0.819275435731799	chr5	93205550	93207216	+	0	NA	intron (NM_015756, intron 1 of 10)	MIR|SINE|MIR	11205	NR_035487	100316841		NR_035487	miRBase:MI0009958	Mir1961	mmu-mir-1961	microRNA 1961	ncRNA
common_peak2-25623-9-5-0.604650905683064-1.21398586181642	chr19	9061413	9061783	+	0	NA	Intergenic	Intergenic	-2176	NR_104460	66395	Mm.203866	NM_009643	ENSMUSG00000069833	Ahnak	DY6	AHNAK nucleoprotein (desmoyokin)	protein-coding
unique_peak1-2142-11-5-0.923731083530457-1.477227296591	chr15	58382986	58383639	+	0	NA	Intergenic	Intergenic	136289	NM_145959	210998	Mm.3224	NM_145959	ENSMUSG00000037119	D15Ertd621e	AV220772|BC033609|Fam91a1|SKIN|mKIAA0493	DNA segment, Chr 15, ERATO Doi 621, expressed	protein-coding
unique_peak2-39069-5-12--1.40482005414695-1.62698961692433	chr8	72420826	72421335	+	0	NA	intron (NM_023312, intron 2 of 4)	ID_B1|SINE|B4	-5034	NM_032004	83984	Mm.432504	NM_032004	ENSMUSG00000047654	Tssk6	Sstk	testis-specific serine kinase 6	protein-coding
common_peak2-32213-9-13--0.617741515653384-0.459837087125828	chr9	121704729	121705493	+	0	NA	Intergenic	RMER17B|LTR|ERVK	-3486	NM_029095	74770	Mm.44195	NM_029095	ENSMUSG00000032523	Hhatl	1110011D13Rik|Gup1	hedgehog acyltransferase-like	protein-coding
common_peak1-15699-7-8--0.370834171144123-1.00793137938329	chr4	139579559	139580040	+	0	NA	Intergenic	Intergenic	-55858	NM_173427	242721	Mm.60400	NM_173427	ENSMUSG00000078234	Klhdc7a	B230308G19Rik	kelch domain containing 7A	protein-coding
unique_peak2-34624-7-7--0.200909169701811-0.97990265578305	chr14	76623257	76623594	+	0	NA	Intergenic	MER90|LTR|ERV1	112727	NM_013745	27275	Mm.21138	NM_013745	ENSMUSG00000022009	Nufip1	Nufip	nuclear fragile X mental retardation protein interacting protein 1	protein-coding
common_peak2-25483-108-74-1.14135827091219-8.01809868813728	chr19	4961953	4962824	+	0	NA	promoter-TSS (NM_025553)	promoter-TSS (NM_025553)	82	NM_025553	66419	Mm.28494	NM_025553	ENSMUSG00000024902	Mrpl11	2410001P07Rik|L11mt	mitochondrial ribosomal protein L11	protein-coding
unique_peak2-32894-9-9--0.132314688483142-1.03275496310833	chr10	16552898	16553489	+	0	NA	Intergenic	Intergenic	262395	NR_038020	100504235	Mm.84044	NR_038020		Gm20125	-	predicted gene, 20125	ncRNA
unique_peak2-34993-2-9--2.23938235115068-1.87199725847353	chr15	99554827	99555323	+	0	NA	promoter-TSS (NM_183256)	promoter-TSS (NM_183256)	-974	NM_183256	66379	Mm.5265	NM_183256	ENSMUSG00000023020	Cox14	2310016M24Rik|AA959804	cytochrome c oxidase assembly protein 14	protein-coding
unique_peak2-38948-3-6--1.22133801201688-1.08602067057793	chr8	27146111	27146414	+	0	NA	intron (NM_207659, intron 19 of 21)	intron (NM_207659, intron 19 of 21)	-20189	NM_008033	14272	Mm.3496	NM_008033	ENSMUSG00000015994	Fnta	FTA	farnesyltransferase, CAAX box, alpha	protein-coding
unique_peak1-3625-43-9-2.46063509063634-8.27956189032735	chr19	36688204	36689140	+	0	NA	intron (NM_001163471, intron 18 of 20)	B1_Mus1|SINE|Alu	59543	NM_172637	226098	Mm.61107	NM_172637	ENSMUSG00000041180	Hectd2	4921524L07|A630025O09Rik|AW212605	HECT domain containing 2	protein-coding
unique_peak1-654-22-11-1.06232160436625-1.51503956548638	chr10	59576106	59577356	+	0	NA	intron (NM_052994, intron 1 of 10)	intron (NM_052994, intron 1 of 10)	7726	NM_052994	94214	Mm.153429	NM_052994	ENSMUSG00000058297	Spock2	AA407235|Gcap26|mKIAA0275	sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2	protein-coding
unique_peak1-806-12-4-1.32684789020028-2.04196296489515	chr11	3565860	3566431	+	0	NA	intron (NM_198162, intron 3 of 25)	B1_Mus2|SINE|Alu	7442	NM_198162	74522	Mm.139127	NM_198162	ENSMUSG00000034543	Morc2a	8430403M08Rik|Zcwcc1	microrchidia 2A	protein-coding
common_peak1-14514-18-20--0.0793982715504091-0.301029995663976	chr3	27153204	27154012	+	0	NA	Intergenic	MuRRS-int|LTR|ERV1	-62391	NM_009425	22035	Mm.1062	NM_009425	ENSMUSG00000039304	Tnfsf10	A330042I21Rik|AI448571|APO-2L|Ly81|TL2|Trail	tumor necrosis factor (ligand) superfamily, member 10	protein-coding
unique_peak2-38747-6-10--0.894033508256995-1.21398586181642	chr7	116031655	116032268	+	0	NA	Intergenic	MER34|LTR|ERV1	5958	NM_207160	277935	Mm.377873	NM_207160	ENSMUSG00000066239	Olfr519	MOR268-6	olfactory receptor 519	protein-coding
common_peak2-24509-20-24--0.155781405183531-0.319918318021793	chr17	26560883	26561975	+	0	NA	intron (NM_001081656, intron 1 of 4)	intron (NM_001081656, intron 1 of 4)	9519	NM_001081656	240055	Mm.133211	NM_001081656	ENSMUSG00000034413	Neurl1b	C230078M08Rik|EG240055	neuralized homolog 1b (Drosophila)	protein-coding
unique_peak2-37374-6-10--0.894033508256995-1.21398586181642	chr4	137930084	137930615	+	0	NA	Intergenic	Intergenic	-6479	NM_028176	72269	Mm.46182	NM_028176	ENSMUSG00000028755	Cda	2210401N16Rik	cytidine deaminase	protein-coding
common_peak1-12517-18-9-0.990991056340989-1.23014042908325	chr18	35192238	35193062	+	0	NA	Intergenic	B3|SINE|B2	-78645	NM_010481	15526	Mm.209419	NM_010481	ENSMUSG00000024359	Hspa9	74kDa|Csa|Grp75|Hsc74|Hsp74|Hsp74a|Hspa9a|Mortalin|Mot-2|Mot2|Mthsp70|Pbp74	heat shock protein 9	protein-coding
common_peak1-19462-14-38--1.3861860585046-2.54214423428716	chrX	107815766	107816442	+	0	NA	Intergenic	MTD-int|LTR|MaLR	-193700	NM_008901	18994	Mm.56946	NM_008901	ENSMUSG00000056854	Pou3f4	Brn-4|Brn4|OTF-9|Otf9|Slf|oct-9	POU domain, class 3, transcription factor 4	protein-coding
common_peak1-8670-9-20--1.20270401637454-1.23014042908325	chr10	128695625	128696276	+	0	NA	Intergenic	Intergenic	-2069	NM_207559	404321	Mm.355212	NM_207559	ENSMUSG00000095483	Olfr776	MOR111-12	olfactory receptor 776	protein-coding
common_peak1-10153-33-16-1.24387472127519-2.60849961611298	chr13	36697533	36698761	+	0	NA	Intergenic	Intergenic	128199	NM_153529	68404	Mm.232930	NM_153529	ENSMUSG00000039114	Nrn1	0710008J23Rik|Cpg15|Nrn	neuritin 1	protein-coding
common_peak2-23779-56-76--0.0311907152556579-0.302468067374185	chr15	99125868	99127620	+	0	NA	intron (NM_018786, intron 1 of 25)	intron (NM_018786, intron 1 of 25)	904	NM_018786	54614	Mm.358668	NM_018786	ENSMUSG00000023007	Prpf40b	2610317D23Rik|Hypc	PRP40 pre-mRNA processing factor 40 homolog B (yeast)	protein-coding
unique_peak1-6045-9-2-1.60465090568306-1.87199725847353	chr6	115321238	115321764	+	0	NA	intron (NM_001127330, intron 1 of 7)	intron (NM_001127330, intron 1 of 7)	10262	NM_001127330	19016	Mm.3020	NM_011146	ENSMUSG00000000440	Pparg	Nr1c3|PPAR-gamma|PPAR-gamma2|PPARgamma|PPARgamma2	peroxisome proliferator activated receptor gamma	protein-coding
common_peak2-31153-13-26--0.9764154715257-1.09492971584134	chr8	41416513	41417188	+	0	NA	intron (NM_030110, intron 1 of 14)	intron (NM_030110, intron 1 of 14)	23445	NM_030110	78506	Mm.169893	NM_030110		Micu3	2900075B16Rik|Efha2	mitochondrial calcium uptake family, member 3	protein-coding
unique_peak2-39846-6-7--0.434601889619698-0.97990265578305	chrX	56768975	56769416	+	0	NA	intron (NM_001290414, intron 2 of 6)	intron (NM_001290414, intron 2 of 6)	69554	NM_001290414	14168	Mm.7995	NM_010200	ENSMUSG00000031137	Fgf13	Fhf2	fibroblast growth factor 13	protein-coding
unique_peak1-5476-8-1-2.00522241794757-2.05605744720049	chr5	129730937	129731436	+	0	NA	Intergenic	Intergenic	128561	NM_001081342	243277	Mm.440501	NM_177734	ENSMUSG00000044017	Gpr133	E230012M21Rik	G protein-coupled receptor 133	protein-coding
common_peak1-8902-64-96--0.134466440478525-0.376583285095203	chr11	50210151	50211483	+	0	NA	intron (NM_172557, intron 14 of 17)	intron (NM_172557, intron 14 of 17)	19596	NM_021510	59013	Mm.21740	NM_021510	ENSMUSG00000007850	Hnrnph1	AI642080|E430005G16Rik|Hnrnph|Hnrph1	heterogeneous nuclear ribonucleoprotein H1	protein-coding
unique_peak1-2861-15-5-1.4272022498345-1.61682445937017	chr17	33789461	33790143	+	0	NA	intron (NM_029804, intron 12 of 15)	intron (NM_029804, intron 12 of 15)	14762	NR_028279	378460	Mm.272606	NM_001002842	ENSMUSG00000032739	Pram1	AY665714	PML-RAR alpha-regulated adaptor molecule 1	protein-coding
common_peak2-20931-12-10-0.189344366450341-0.386243247519795	chr11	7238563	7239151	+	0	NA	Intergenic	BGLII_B|LTR|ERVK	-124931	NM_008343	16009	Mm.29254	NM_008343	ENSMUSG00000020427	Igfbp3	AI649005|IGFBP-3|IGgfbp3	insulin-like growth factor binding protein 3	protein-coding
common_peak1-17739-47-35-0.764916423324236-1.84937269552405	chr7	80827517	80829231	+	0	NA	Intergenic	Lx9|LINE|L1	3075	NR_033604	244061	Mm.484605	NR_033604		Gm4971	EG244061	Smad nuclear interacting protein 1 pseudogene	pseudo
common_peak2-21520-12-13--0.158578936969966-0.301029995663979	chr11	94499646	94500278	+	0	NA	intron (NM_133807, intron 5 of 6)	intron (NM_133807, intron 5 of 6)	8824	NM_133807	98238	Mm.172720	NM_133807	ENSMUSG00000020869	Lrrc59	AA959742|C78668	leucine rich repeat containing 59	protein-coding
common_peak1-14279-21-21-0.110057646628938-0.344491671143527	chr2	156863059	156863908	+	0	NA	intron (NM_001164663, intron 5 of 14)	intron (NM_001164663, intron 5 of 14)	-30672	NM_025853	66934	Mm.25410	NM_025853	ENSMUSG00000027635	Dsn1	1700022L09Rik|AW552447	DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)	protein-coding
common_peak1-19207-44-61--0.13230347581834-0.330479330879757	chr9	103364775	103365753	+	0	NA	intron (NM_001002896, intron 1 of 6)	intron (NM_001002896, intron 1 of 6)	17394	NM_001002896	107993	Mm.335403	NM_001002896	ENSMUSG00000032556	Bfsp2	AI448593|CP49	beaded filament structural protein 2, phakinin	protein-coding
unique_peak2-38267-6-6--0.241956811677302-0.947717972411649	chr6	127356288	127356819	+	0	NA	Intergenic	Intergenic	-47188	NM_181402	101187	Mm.110818	NM_181402	ENSMUSG00000037997	Parp11	5330431N24Rik|AI851877|ARTD11|HIN1L	poly (ADP-ribose) polymerase family, member 11	protein-coding
common_peak1-15427-19-20-0.0103699038829257-0.306326795069978	chr4	88950649	88951340	+	0	NA	Intergenic	Intergenic	5947	NM_007670	12579	Mm.423094	NM_007670	ENSMUSG00000073802	Cdkn2b	AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b	cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)	protein-coding
common_peak2-29296-12-8-0.478850983645327-0.562038191119709	chr5	144318090	144318658	+	0	NA	intron (NM_026050, intron 2 of 2)	PB1D7|SINE|Alu	8800	NM_026050	67238	Mm.383219	NM_026050	ENSMUSG00000048910	Fam220a	1500026F15Rik|2810453I06Rik|AW047776|Acpin1|Sipar	family with sequence similarity 220, member A	protein-coding
unique_peak1-1015-24-4-2.47128180788035-4.69785539356838	chr11	74557634	74558889	+	0	NA	Intergenic	PB1|SINE|Alu	-20375	NM_013625	18472	Mm.397111	NM_013625	ENSMUSG00000020745	Pafah1b1	LIS-1|Lis1|MMS10-U|Mdsh|Ms10u|Pafaha	platelet-activating factor acetylhydrolase, isoform 1b, subunit 1	protein-coding
unique_peak1-272-9-2-1.60465090568306-1.87199725847353	chr1	97759329	97759897	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-146518	NR_040479	75381	Mm.417807	NR_040479		4930598F16Rik	-	RIKEN cDNA 4930598F16 gene	ncRNA
common_peak1-10216-17-20--0.174021084573723-0.306598483909156	chr13	49298279	49298945	+	0	NA	intron (NM_026738, intron 5 of 5)	intron (NM_026738, intron 5 of 5)	12783	NM_026738	68480	Mm.3336	NM_026738	ENSMUSG00000037960	1110007C09Rik	AI851695|Bincard	RIKEN cDNA 1110007C09 gene	protein-coding
common_peak2-22467-23-21-0.262335885871783-0.416752705545949	chr13	46735614	46736486	+	0	NA	intron (NM_026056, intron 11 of 12)	intron (NM_026056, intron 11 of 12)	-28841	NM_001033192	97863	Mm.275934	NM_001033192	ENSMUSG00000069237	C78339	-	expressed sequence C78339	protein-coding
common_peak1-17794-14-7-0.899216160357645-0.947446088118041	chr7	98812774	98813390	+	0	NA	intron (NM_011807, intron 2 of 22)	intron (NM_011807, intron 2 of 22)	-397822	NM_001243046	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
common_peak1-15376-12-7-0.648775985087639-0.697979855752659	chr4	59580049	59580681	+	0	NA	Intergenic	PB1D10|SINE|Alu	-14070	NM_001301367	72479	Mm.272905	NM_024255	ENSMUSG00000028383	Hsdl2	2610207I16Rik	hydroxysteroid dehydrogenase like 2	protein-coding
unique_peak2-36685-2-12--2.61789397440441-2.55640854263862	chr3	32417156	32417721	+	0	NA	intron (NM_144519, intron 5 of 6)	L1MC3|LINE|L1	7924	NM_144519	67778	Mm.285620	NM_144519		Zfp639	6230400O18Rik|ANC-2H01|ZASC1|Znf639	zinc finger protein 639	protein-coding
common_peak2-23785-20-18-0.240147271147608-0.388034239052786	chr15	99505042	99505909	+	0	NA	intron (NM_009597, intron 3 of 11)	intron (NM_009597, intron 3 of 11)	4326	NM_009597	11419	Mm.440107	NM_009597	ENSMUSG00000023017	Asic1	AI843610|ASIC|ASIC1a|Accn2|B530003N02Rik|BNaC2	acid-sensing (proton-gated) ion channel 1	protein-coding
unique_peak2-32575-13-26--0.9764154715257-1.09492971584134	chr1	86526733	86527910	+	0	NA	Intergenic	Intergenic	968064	NM_030194	109032	Mm.335802	NM_030194	ENSMUSG00000070034	Sp110	5031415C07Rik|52kDa|5830484A20Rik|ENSMUSG00000075603|Ifi75|Ipr1	Sp110 nuclear body protein	protein-coding
common_peak2-26627-12-15--0.351224014912361-0.332077462497413	chr2	119034824	119035446	+	0	NA	promoter-TSS (NM_139139)	promoter-TSS (NM_139139)	-604	NM_139139	69408	Mm.222241	NM_139139	ENSMUSG00000034278	Dnajc17	1700025B16Rik|C87112|D9Bwg1371e	DnaJ (Hsp40) homolog, subfamily C, member 17	protein-coding
unique_peak2-36897-8-14--0.901668177660948-0.660903317613906	chr3	96221162	96221733	+	0	NA	Intergenic	B4|SINE|B4	-2691	NR_001579	21748		NR_001579	ENSMUSG00000064796	Terc	mTER|mTR	telomerase RNA component	ncRNA
common_peak1-13070-87-71-0.825712104338857-3.89645580124613	chr19	6278129	6280133	+	0	NA	intron (NM_010119, intron 1 of 4)	intron (NM_010119, intron 1 of 4)	2235	NM_010119	13660	Mm.30169	NM_010119	ENSMUSG00000024772	Ehd1	AA409636|Past1|RME-1	EH-domain containing 1	protein-coding
common_peak2-22600-20-16-0.400611943340854-0.507611860039817	chr13	73802756	73803555	+	0	NA	intron (NM_001168646, intron 10 of 11)	intron (NM_001168646, intron 10 of 11)	12316	NM_001168646	22598	Mm.30370	NM_011730	ENSMUSG00000021612	Slc6a18	B0AT3|D630001K16Rik|Xt2|Xtrp2	solute carrier family 6 (neurotransmitter transporter), member 18	protein-coding
common_peak2-28204-16-20--0.274053780510699-0.353907621462756	chr4	117133413	117134070	+	0	NA	intron (NM_025739, intron 2 of 14)	intron (NM_025739, intron 2 of 14)	35779	NM_025739	66743	Mm.318331	NM_025739	ENSMUSG00000028677	Rnf220	4732477A13|4931406I20Rik|5730503K05Rik|AV302541	ring finger protein 220	protein-coding
common_peak2-30762-7-6--0.00826409175941478-0.97990265578305	chr7	122969380	122969769	+	0	NA	intron (NM_001025559, intron 2 of 15)	intron (NM_001025559, intron 2 of 15)	-1350	NM_001277327	20679	Mm.323365	NM_011445	ENSMUSG00000051910	Sox6	AI987981|SOX-LZ	SRY (sex determining region Y)-box 6	protein-coding
common_peak1-8416-13-6-0.971117108580164-1.01572999746118	chr10	74680793	74681351	+	0	NA	intron (NM_001145826, intron 1 of 18)	L1M4|LINE|L1	5937	NM_001145826	74392	Mm.27716	NM_153406	ENSMUSG00000033444	Specc1l	4930470P14Rik|4932439K10Rik|9530057A13Rik|AI317249|Cytsa|mKIAA0376	sperm antigen with calponin homology and coiled-coil domains 1-like	protein-coding
common_peak1-8561-14-22--0.624345795699369-0.590343908676233	chr10	94380705	94381490	+	0	NA	intron (NM_018797, intron 2 of 30)	MIR|SINE|MIR	26115	NM_018797	54712	Mm.256712	NM_018797	ENSMUSG00000074785	Plxnc1	2510048K12Rik|AW742158|CD232|Vespr	plexin C1	protein-coding
common_peak2-25001-19-15-0.402687326661686-0.519193887192487	chr18	11915941	11916522	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-81552	NM_022021	63955	Mm.40717	NM_022021	ENSMUSG00000040957	Cables1	Cables|ik3-1	CDK5 and Abl enzyme substrate 1	protein-coding
unique_peak1-570-11-1-2.50869358425161-2.83420869758413	chr10	73826251	73826853	+	0	NA	intron (NM_001142748, intron 15 of 25)	intron (NM_001142748, intron 15 of 25)	541937	NM_001142735	11994	Mm.338933	NM_023115	ENSMUSG00000052613	Pcdh15	BB078305|ENSMUSG00000046980|Gm9815|Ush1f|av|nmf19	protocadherin 15	protein-coding
unique_peak2-36184-5-5--0.289342836727009-0.909929411522249	chr2	30318704	30319109	+	0	NA	Intergenic	Intergenic	10813	NM_030244	72500	Mm.295464	NM_030244	ENSMUSG00000089762	Ier5l	2610524G09Rik	immediate early response 5-like	protein-coding
unique_peak1-1065-7-2-1.21412832957703-1.45399745587252	chr11	83471676	83472201	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-4148	NM_013652	20303	Mm.244263	NM_013652	ENSMUSG00000018930	Ccl4	AT744.1|Act-2|MIP-1B|Mip1b|Scya4	chemokine (C-C motif) ligand 4	protein-coding
common_peak1-17817-11-24--1.13516260552311-1.3750876294627	chr7	101970633	101971214	+	0	NA	Intergenic	L1Md_T|LINE|L1	-1388224	NM_011858	23966	Mm.254610	NM_011858	ENSMUSG00000048078	Tenm4	Doc4|ELM2|Odz4|R75022|Ten-m4|l(7)-3Rn|l7Rn3|mKIAA1302	teneurin transmembrane protein 4	protein-coding
common_peak1-11142-93-92-0.571911052398238-2.31232075349498	chr15	73183534	73185435	+	0	NA	intron (NM_007982, intron 2 of 31)	ORR1C2|LTR|MaLR	69137	NM_007982	14083	Mm.254494	NM_007982	ENSMUSG00000022607	Ptk2	FAK|FRNK|Fadk|mKIAA4203|p125FAK	PTK2 protein tyrosine kinase 2	protein-coding
common_peak1-16363-9-19--1.13231468848314-1.09394599973099	chr5	122422690	122423197	+	0	NA	intron (NM_007804, intron 2 of 22)	intron (NM_007804, intron 2 of 22)	74891	NM_007804	13048	Mm.156172	NM_007804	ENSMUSG00000042589	Cux2	1700051K22Rik|Cutl2|Cux-2|ENSMUSG00000072641	cut-like homeobox 2	protein-coding
common_peak1-9364-34-20-0.989751104222505-2.03367508793052	chr11	97699746	97701027	+	0	NA	TTS (NM_010688)	TTS (NM_010688)	-1708	NM_001080935	68127	Mm.110270	NM_001080935	ENSMUSG00000089676	B230217C12Rik	AI840637	RIKEN cDNA B230217C12 gene	protein-coding
common_peak1-14105-38-56--0.261437354866211-0.434791164020309	chr2	126875384	126876608	+	0	NA	intron (NM_175550, intron 14 of 20)	Lx9|LINE|L1	-20397	NM_026678	109778	Mm.22028	NM_026678	ENSMUSG00000001999	Blvra	0610006A11Rik|2500001N03Rik|Blvr	biliverdin reductase A	protein-coding
common_peak2-19746-9-11--0.395349094316936-0.344532117358383	chr1	74600885	74601382	+	0	NA	exon (NM_001081456, exon 7 of 17)	exon (NM_001081456, exon 7 of 17)	10199	NM_148937	18802	Mm.290731	NM_148937	ENSMUSG00000026173	Plcd4	4921507K24Rik	phospholipase C, delta 4	protein-coding
common_peak1-16720-8-18--1.24270509549601-1.15812782348128	chr6	29768473	29768993	+	0	NA	intron (NM_001171000, intron 1 of 16)	B1_Mur3|SINE|Alu	-40863	NM_001171001	74340	Mm.210899	NM_021414	ENSMUSG00000029772	Ahcyl2	4631427C17Rik|AI227036|Adohcyase3|mKIAA0828	S-adenosylhomocysteine hydrolase-like 2	protein-coding
unique_peak1-3834-11-4-1.18676548936425-1.68134727924692	chr2	3659350	3659777	+	0	NA	intron (NM_025626, intron 1 of 3)	intron (NM_025626, intron 1 of 3)	28833	NM_025626	66540	Mm.277864	NM_025626	ENSMUSG00000026655	Fam107b	3110001A13Rik|AA589595|AA959793|AI132312	family with sequence similarity 107, member B	protein-coding
common_peak1-9906-20-20-0.0957573618124323-0.321718508207528	chr12	86834057	86834850	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	19602	NM_010234	14281	Mm.246513	NM_010234	ENSMUSG00000021250	Fos	D12Rfj1|c-fos|cFos	FBJ osteosarcoma oncogene	protein-coding
common_peak2-24323-55-56-0.371729856987961-0.843970404532257	chr17	71089424	71090353	+	0	NA	intron (NM_001128181, intron 5 of 9)	B1_Mus1|SINE|Alu	106229	NM_001164077	21815	Mm.101034	NM_009372	ENSMUSG00000047407	Tgif1	AA959811|AI462167|Tgif	TGFB-induced factor homeobox 1	protein-coding
unique_peak1-2576-7-1-1.79909083029819-1.80617997398389	chr16	29787750	29788233	+	0	NA	Intergenic	Intergenic	191219	NR_037689	328657	Mm.425982	NM_001033403		Gm1968	-	predicted gene 1968	ncRNA
common_peak2-27386-46-59--0.00889465235971709-0.302854783871693	chr3	87525006	87526590	+	0	NA	intron (NM_001003912, intron 20 of 39)	intron (NM_001003912, intron 20 of 39)	26747	NM_028971	74485	Mm.474494	NM_028971	ENSMUSG00000023084	Lrrc71	4933430H15Rik	leucine rich repeat containing 71	protein-coding
unique_peak1-1499-10-2-1.77145284428761-2.09384600808989	chr13	3298808	3299335	+	0	NA	Intergenic	(GAAAA)n|Simple_repeat|Simple_repeat	150350	NR_001581	73266	Mm.335891	NR_001581		Speer6-ps1	1700039A02Rik|SPEER-6	spermatogenesis associated glutamate (E)-rich protein 6, pseudogene 1	pseudo
common_peak1-13105-63-47-0.853350090349434-2.93378073455177	chr19	8741023	8742636	+	0	NA	intron (NM_001112697, intron 2 of 2)	intron (NM_001112697, intron 2 of 2)	3334	NM_001112697	12669	Mm.240607	NM_007698	ENSMUSG00000032773	Chrm1	Chrm-1|M1|M1R	cholinergic receptor, muscarinic 1, CNS	protein-coding
common_peak2-20787-8-13--0.802132504110034-0.562038191119711	chr10	120635680	120636257	+	0	NA	Intergenic	Intergenic	112277	NM_029057	74694	Mm.233833	NM_029057	ENSMUSG00000052302	Tbc1d30	4930505D03Rik	TBC1 domain family, member 30	protein-coding
common_peak1-11457-143-143-0.687593097535125-4.93181882395487	chr15	101335865	101338609	+	0	NA	TTS (NR_002872)	TTS (NR_002872)	2990	NR_002872	574415	Mm.491077	NR_002872		Gm6042	EG574415|Kb32p	type II keratin Kb32P	pseudo
common_peak1-14689-84-39-1.61300596400166-10.0553122727899	chr3	65823859	65826294	+	0	NA	Intergenic	L1MC4|LINE|L1	-62929	NM_019937	56706	Mm.175612	NM_019937	ENSMUSG00000027829	Ccnl1	2610030E23Rik|AU018493|Ccnl|ania-6a	cyclin L1	protein-coding
common_peak1-15705-26-12-1.22745937401737-2.03163221100073	chr4	140616253	140617398	+	0	NA	promoter-TSS (NM_001145958)	promoter-TSS (NM_001145958)	-365	NM_001145958	230872	Mm.80685	NM_172122	ENSMUSG00000040860	Crocc	-	ciliary rootlet coiled-coil, rootletin	protein-coding
unique_peak1-4331-9-2-1.60465090568306-1.87199725847353	chr2	152729676	152730195	+	0	NA	Intergenic	Intergenic	-7153	NM_001081044	228785	Mm.250604	NM_001081044	ENSMUSG00000027470	Mylk2	9830004H17Rik|BB138278	myosin, light polypeptide kinase 2, skeletal muscle	protein-coding
common_peak1-13593-12-15--0.351224014912361-0.332077462497413	chr2	18046670	18047266	+	0	NA	intron (NR_045538, intron 7 of 22)	intron (NR_045538, intron 7 of 22)	60756	NM_001252561	17354	Mm.209175	NM_010804	ENSMUSG00000026743	Mllt10	Af10|B130021D15Rik|D630001B22Rik|mKIAA4140	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	protein-coding
unique_peak2-32875-0-8--4.01005593191652-2.05605744720049	chr10	8912008	8912441	+	0	NA	Intergenic	L1MA4|LINE|L1	-306356	NM_175155	70097	Mm.338275	NM_175155	ENSMUSG00000015305	Sash1	1100001C18Rik|2500002E12Rik|A330076K04Rik|mKIAA0790	SAM and SH3 domain containing 1	protein-coding
unique_peak2-37564-11-15--0.491306415748387-0.435191258261915	chr5	32713468	32714084	+	0	NA	Intergenic	MIRb|SINE|MIR	-47567	NM_172707	19046	Mm.241931	NM_172707		Ppp1cb	1200010B19	protein phosphatase 1, catalytic subunit, beta isoform	protein-coding
unique_peak1-7295-8-5-0.420259917226415-1.10484139239135	chr9	109875914	109876432	+	0	NA	intron (NM_001205332, intron 1 of 17)	Lx9|LINE|L1	41895	NM_008633	17758	Mm.217318	NM_008633	ENSMUSG00000032479	Map4	AA407148|MAP-4|Mtap-4|Mtap4	microtubule-associated protein 4	protein-coding
common_peak1-11348-29-31-0.112290080615111-0.353704024845522	chr15	88861623	88862771	+	0	NA	intron (NM_031260, intron 22 of 26)	B1F2|SINE|Alu	-27959	NM_001002005	406218	Mm.483059	NM_001002005	ENSMUSG00000058441	Panx2	-	pannexin 2	protein-coding
common_peak1-13737-13-20--0.613845392140992-0.532159081577619	chr2	32450650	32451269	+	0	NA	intron (NM_011373, intron 3 of 4)	intron (NM_011373, intron 3 of 4)	-4270	NM_001025311	50935	Mm.88831	NM_016973	ENSMUSG00000026811	St6galnac6	ST6GalNAcVI|Siat7f	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6	protein-coding
unique_peak2-36581-6-16--1.52206473087004-1.32521814697968	chr2	175275182	175275807	+	0	NA	Intergenic	L1_Mur2|LINE|L1	-14216	NM_001099349	100043381		NM_001099349		Gm14308	OTTMUSG00000016254	predicted gene 14308	protein-coding
unique_peak1-4873-11-3-1.50869358425161-1.95434855131066	chr4	11989156	11989838	+	0	NA	intron (NR_110955, intron 13 of 28)	intron (NR_110955, intron 13 of 28)	25607	NM_177861	329795	Mm.475125	NM_177861	ENSMUSG00000049488	Tmem67	5330408M12Rik|B230117O07|b2b1163.1Clo|b2b1291.1Clo	transmembrane protein 67	protein-coding
common_peak1-12359-9-6-0.382258484346616-1.11707584880836	chr17	57011441	57011932	+	0	NA	intron (NM_001039114, intron 2 of 14)	intron (NM_001039114, intron 2 of 14)	2184	NM_001039114	328845	Mm.179421	NM_001039114	ENSMUSG00000024207	Acsbg2	Bgr	acyl-CoA synthetase bubblegum family member 2	protein-coding
common_peak1-14221-34-42--0.0441962277008319-0.30102999566401	chr2	152226557	152227842	+	0	NA	Intergenic	Intergenic	-3417	NM_011438	20667	Mm.28424	NM_011438	ENSMUSG00000051817	Sox12	2010205A02Rik	SRY (sex determining region Y)-box 12	protein-coding
unique_peak1-7254-14-3-1.89921616035764-2.80787975886178	chr9	83573020	83573601	+	0	NA	Intergenic	Intergenic	-11772	NR_046066	100039222	Mm.405596	NR_046066		Gm2109	-	predicted gene 2109	ncRNA
unique_peak1-721-22-6-1.8399291830298-3.01815507148775	chr10	93337371	93338357	+	0	NA	intron (NM_019648, intron 5 of 11)	B1_Mur1|SINE|Alu	16083	NM_019648	56307	Mm.289329	NM_019648	ENSMUSG00000036112	Metap2	4930584B20Rik|A930035J23Rik|AI047573|AL024412|AU014659|Amp2|Mnpep|p67|p67eIF2	methionine aminopeptidase 2	protein-coding
common_peak2-22620-21-22-0.0459273092092225-0.319918318021793	chr13	80882554	80883553	+	0	NA	Intergenic	Intergenic	-139630	NM_001042591	105171	Mm.423137	NM_001042591	ENSMUSG00000074794	Arrdc3	AI450344|mKIAA1376	arrestin domain containing 3	protein-coding
common_peak1-9714-19-16-0.315224485411347-0.448200956659575	chr12	31074065	31075037	+	0	NA	Intergenic	(TA)n|Simple_repeat|Simple_repeat	-16311	NM_172951	268534	Mm.279765	NM_172951	ENSMUSG00000020672	Sntg2	2210008K22Rik|9530013L23|BB121248	syntrophin, gamma 2	protein-coding
common_peak1-13785-24-6-1.98585498071011-3.65509904868667	chr2	38483925	38485087	+	0	NA	intron (NM_011187, intron 5 of 7)	intron (NM_011187, intron 5 of 7)	14920	NM_011187	19177	Mm.389251	NM_011187	ENSMUSG00000026750	Psmb7	AU020723|MC14	proteasome (prosome, macropain) subunit, beta type 7	protein-coding
unique_peak1-394-10-1-2.35641534500877-2.57096726280955	chr1	153923631	153924114	+	0	NA	intron (NM_197990, intron 1 of 5)	B3A|SINE|B2	13578	NM_197990	69399	Mm.278031	NM_197990	ENSMUSG00000032666	1700025G04Rik	2610510E02Rik|2900042O04Rik|ENSMUSG00000073540	RIKEN cDNA 1700025G04 gene	protein-coding
unique_peak2-33037-3-6--1.22133801201688-1.08602067057793	chr10	70098091	70098488	+	0	NA	intron (NR_045291, intron 1 of 5)	intron (NR_045291, intron 1 of 5)	16384	NR_045291	319646	Mm.483039	NR_045291	ENSMUSG00000037747	D630013N20Rik	-	RIKEN cDNA D630013N20 gene	ncRNA
common_peak2-29004-7-4-0.477162735410827-1.09384600808989	chr5	109690624	109690874	+	0	NA	Intergenic	L1_Mus1|LINE|L1	35826	NM_001104626	211223	Mm.469881	NM_001104626	ENSMUSG00000091375	Vmn2r15	EG211223	vomeronasal 2, receptor 15	protein-coding
common_peak1-14354-16-25--0.58217607587303-0.633951497070961	chr2	165992579	165993248	+	0	NA	Intergenic	Intergenic	-11730	NM_028072	72043	Mm.1011	NM_028072	ENSMUSG00000006800	Sulf2	2010004N24Rik|AU020235|MSulf-2|mKIAA1247	sulfatase 2	protein-coding
unique_peak2-38340-10-24--1.28744084476596-1.59083646988122	chr7	38207148	38207860	+	0	NA	Intergenic	Intergenic	347267	NM_172385	243937	Mm.322505	NM_172385	ENSMUSG00000043456	Zfp536	9630010P11Rik|Znf536|mKIAA0390	zinc finger protein 536	protein-coding
common_peak2-31815-13-13--0.0288828914198356-0.309074325783021	chr9	41207571	41208036	+	0	NA	intron (NR_040725, intron 3 of 4)	intron (NR_040725, intron 3 of 4)	23159	NR_040725	73144	Mm.482850	NR_040725		3110039I08Rik	-	RIKEN cDNA 3110039I08 gene	ncRNA
common_peak1-8130-37-38-0.24059085262357-0.466726531031556	chr1	189006686	189008086	+	0	NA	intron (NM_029067, intron 3 of 6)	intron (NM_029067, intron 3 of 6)	31939	NM_029067	74717	Mm.250430	NM_028848	ENSMUSG00000026611	Spata17	1700065F16Rik|4930504I07Rik|4930513F16Rik|MSRG-11	spermatogenesis associated 17	protein-coding
common_peak1-13854-68-75-0.322033265854711-0.813149881052206	chr2	64097631	64099046	+	0	NA	Intergenic	Intergenic	-162243	NM_001267847	60344	Mm.130769	NM_021716	ENSMUSG00000075324	Fign	fi|fidget	fidgetin	protein-coding
unique_peak2-34057-5-11--1.28934283672701-1.477227296591	chr12	118302166	118302841	+	0	NA	intron (NM_011215, intron 12 of 22)	(CA)n|Simple_repeat|Simple_repeat	87239	NR_033538	100038689	Mm.445351	NR_033538		Gm10421	ENSMUSG00000072792	predicted gene 10421	ncRNA
unique_peak1-3766-29-12-1.41185036247402-2.85339697372352	chr19	55233034	55234292	+	0	NA	Intergenic	Intergenic	-21712	NM_009348	21684	Mm.42139	NM_009348	ENSMUSG00000024979	Tectb	Tctnb	tectorin beta	protein-coding
unique_peak2-37618-5-5--0.289342836727009-0.909929411522249	chr5	65199774	65200183	+	0	NA	intron (NM_008453, intron 1 of 5)	intron (NM_008453, intron 1 of 5)	5216	NM_008453	16599	Mm.392759	NM_008453	ENSMUSG00000029178	Klf3	9930027G08Rik|AL024007|Bklf|Tef-2	Kruppel-like factor 3 (basic)	protein-coding
common_peak2-24749-79-201--0.829376315575175-5.58721477996997	chr17	53478088	53480238	+	0	NA	Intergenic	L1_Mur1|LINE|L1	123483	NM_172497	211482	Mm.60887	NM_172497	ENSMUSG00000023931	Efhb	4921525D22Rik	EF hand domain family, member B	protein-coding
common_peak1-10971-23-14-0.814876908900562-1.09492971584134	chr15	28001279	28002157	+	0	NA	Intergenic	Intergenic	-46115	NM_001081302	223435	Mm.485422	NM_001081302	ENSMUSG00000022263	Trio	6720464I07Rik|AA408740|Solo	triple functional domain (PTPRF interacting)	protein-coding
common_peak1-15020-7-8--0.370834171144123-1.00793137938329	chr3	116952707	116953174	+	0	NA	Intergenic	Intergenic	110854	NM_177664	229791	Mm.140138	NM_177664	ENSMUSG00000044667	Lppr4	A330086D10|D3Bwg0562e|PRG-1|mKIAA0455	lipid phosphate phosphatase-related protein type 4	protein-coding
unique_peak1-5469-19-2-2.81772482594053-4.27364484827118	chr5	125053224	125054051	+	0	NA	intron (NM_026486, intron 4 of 17)	intron (NM_026486, intron 4 of 17)	4879	NM_026486	67978	Mm.1158	NM_026486	ENSMUSG00000029386	Tctn2	4432405B04Rik|Tect2	tectonic family member 2	protein-coding
unique_peak1-5441-7-2-1.21412832957703-1.45399745587252	chr5	116022211	116022690	+	0	NA	intron (NM_172719, intron 2 of 57)	PB1D7|SINE|Alu	7178	NM_172719	231659	Mm.153014	NM_172719	ENSMUSG00000041638	Gcn1l1	4932409G22|AL022764|G431004K08Rik|GCN1L|mKIAA0219	GCN1 general control of amino-acid synthesis 1-like 1 (yeast)	protein-coding
unique_peak1-3059-7-1-1.79909083029819-1.80617997398389	chr18	8595604	8596123	+	0	NA	Intergenic	L1VL2|LINE|L1	-616991	NM_008058	14370	Mm.184289	NM_008058	ENSMUSG00000036904	Fzd8	Fz8	frizzled homolog 8 (Drosophila)	protein-coding
unique_peak1-1663-15-8-0.842239749113344-0.891319708951327	chr13	63304886	63305657	+	0	NA	intron (NM_001289926, intron 10 of 15)	intron (NM_001289926, intron 10 of 15)	-36067	NR_110520	72061	Mm.188105	NM_028079	ENSMUSG00000021458	2010111I01Rik	2300006M17Rik|AP-O|Aopep	RIKEN cDNA 2010111I01 gene	protein-coding
common_peak2-29081-55-71-0.0346948697103899-0.31450906201653	chr5	120612153	120613645	+	0	NA	intron (NM_028762, intron 21 of 23)	intron (NM_028762, intron 21 of 23)	-23627	NR_045793	100503427	Mm.446834	NR_045793	ENSMUSG00000097368	Gm10390	ENSMUSG00000072671	predicted gene 10390	ncRNA
common_peak2-20476-24-32--0.251184216590737-0.358978896303361	chr10	44078274	44079165	+	0	NA	promoter-TSS (NR_035450)	promoter-TSS (NR_035450)	-763	NR_035450	100316688		NR_035450		Mir1929	mmu-mir-1929	microRNA 1929	ncRNA
unique_peak2-37911-9-9--0.132314688483142-1.03275496310833	chr5	143909225	143909796	+	0	NA	Intergenic	Intergenic	17920	NR_040424	100042605	Mm.332809	NR_040424		Rbakdn	Gm3925	Rbak downstream neighbor (non-protein coding)	ncRNA
unique_peak1-1384-15-5-1.4272022498345-1.61682445937017	chr12	56519008	56519658	+	0	NA	3' UTR (NM_011968, exon 7 of 7)	3' UTR (NM_011968, exon 7 of 7)	19521	NM_011968	26443	Mm.30210	NM_011968	ENSMUSG00000021024	Psma6	IOTA	proteasome (prosome, macropain) subunit, alpha type 6	protein-coding
unique_peak1-781-16-4-1.7963355473807-2.18192634393779	chr11	3374361	3375232	+	0	NA	intron (NR_028317, intron 2 of 3)	intron (NR_028317, intron 2 of 3)	-13434	NM_172791	237625	Mm.100476	NM_172791	ENSMUSG00000034579	Pla2g3	-	phospholipase A2, group III	protein-coding
common_peak2-25246-12-23--0.936186515633517-0.912223620338476	chr18	65050969	65051767	+	0	NA	intron (NM_001114386, intron 1 of 30)	B2_Mm1a|SINE|B2	3958	NM_001114386	83814	Mm.98668	NM_031881	ENSMUSG00000024589	Nedd4l	1300012C07Rik|Nedd4-2|Nedd4b	neural precursor cell expressed, developmentally down-regulated gene 4-like	protein-coding
common_peak2-30968-29-31-0.112290080615111-0.353704024845522	chr8	120668061	120669085	+	0	NA	Intergenic	Intergenic	-139082	NM_019707	12554	Mm.334841	NM_019707	ENSMUSG00000031841	Cdh13	4932416G01Rik|Cdht|T-cadherin|Tcad	cadherin 13	protein-coding
unique_peak2-37507-1-6--2.43441193227435-1.56314192529759	chr5	12055790	12056134	+	0	NA	Intergenic	Lx3A|LINE|L1	137919	NM_001177510	545732	Mm.389066	NM_001177510	ENSMUSG00000067848	4933402N22Rik	-	RIKEN cDNA 4933402N22 gene	protein-coding
common_peak2-20781-14-14--0.00767443525087419-0.308519316180257	chr10	119240235	119241140	+	0	NA	intron (NM_133442, intron 1 of 21)	intron (NM_133442, intron 1 of 21)	-15758	NM_001277294	74053	Mm.196692	NM_028736	ENSMUSG00000034813	Grip1	4931400F03Rik|GRIP|eb	glutamate receptor interacting protein 1	protein-coding
unique_peak1-5650-10-3-1.35641534500877-1.75805390616669	chr6	29271210	29271716	+	0	NA	intron (NM_207258, intron 2 of 6)	B4A|SINE|B4	2323	NM_001289664	330277	Mm.87624	NM_207258	ENSMUSG00000039742	Fam71f1	GARI-L1|Gm764|NYD-SP18	family with sequence similarity 71, member F1	protein-coding
common_peak2-30670-25-49--0.782006284429619-1.42714050806394	chr7	101970029	101971771	+	0	NA	Intergenic	L1Md_T|LINE|L1	-1388247	NM_011858	23966	Mm.254610	NM_011858	ENSMUSG00000048078	Tenm4	Doc4|ELM2|Odz4|R75022|Ten-m4|l(7)-3Rn|l7Rn3|mKIAA1302	teneurin transmembrane protein 4	protein-coding
common_peak2-26302-6-6--0.241956811677302-0.947717972411649	chr2	32363008	32363433	+	0	NA	Intergenic	ID_B1|SINE|B4	-27659	NM_153560	98952	Mm.4065	NM_153560	ENSMUSG00000039157	Fam102a	AI426465|C230093N12Rik|Eeig1	family with sequence similarity 102, member A	protein-coding
common_peak1-9782-96-85-0.739786459653231-3.6393810943122	chr12	57534762	57537459	+	0	NA	Intergenic	MTE2a|LTR|MaLR	-89229	NM_145442	217588	Mm.25656	NM_145442	ENSMUSG00000021028	Mbip	4933408E06Rik	MAP3K12 binding inhibitory protein 1	protein-coding
common_peak1-11272-13-13--0.0288828914198356-0.309074325783021	chr15	81729198	81729824	+	0	NA	intron (NM_080633, intron 3 of 17)	intron (NM_080633, intron 3 of 17)	26618	NM_080633	11429	Mm.154581	NM_080633	ENSMUSG00000022477	Aco2	Aco-2|Aco3|D10Wsu183e	aconitase 2, mitochondrial	protein-coding
common_peak1-12960-20-15-0.488074784591193-0.590343908676236	chr19	57359642	57360627	+	0	NA	Intergenic	Intergenic	11684	NR_045319	78120	Mm.445892	NR_045319		4930449E18Rik	-	RIKEN cDNA 4930449E18 gene	ncRNA
common_peak1-15771-20-17-0.318149783148881-0.440610794044987	chr4	152325775	152326640	+	0	NA	Intergenic	Intergenic	254558	NR_033138	330004	Mm.291863	NM_001033414		Gm833	-	predicted gene 833	ncRNA
common_peak1-19109-19-34--0.72659569028328-0.974620203848502	chr9	75379098	75379806	+	0	NA	intron (NM_016963, intron 2 of 9)	intron (NM_016963, intron 2 of 9)	28012	NM_016963	50875	Mm.38445	NM_016963	ENSMUSG00000058587	Tmod3	U-Tmod|UTMOD	tropomodulin 3	protein-coding
common_peak2-21062-57-74-0.0372143495830484-0.313973398029927	chr11	48825722	48826836	+	0	NA	Intergenic	RLTR15|LTR|ERVK	-20523	NM_001145164	100039796	Mm.482363	NM_001145164	ENSMUSG00000078921	Tgtp2	OTTMUSG00000005537	T cell specific GTPase 2	protein-coding
unique_peak2-35124-5-7--0.704380336005853-1.01466476204226	chr16	26105243	26105567	+	0	NA	exon (NM_173379, exon 1 of 15)	exon (NM_173379, exon 1 of 15)	465	NM_173379	210530	Mm.326869	NM_173379		Leprel1	4832416N06|AW553532|Mlat4|P3H2	leprecan-like 1	protein-coding
common_peak1-9519-54-73--0.0363676039992162-0.302527574714518	chr11	115603401	115604858	+	0	NA	Intergenic	Intergenic	-22618	NM_028014	71947	Mm.23168	NM_028014	ENSMUSG00000020747	2310067B10Rik	Kiaa0195|mKIAA0195	RIKEN cDNA 2310067B10 gene	protein-coding
common_peak1-11476-89-87-0.575535136188705-2.24276815333291	chr15	102024175	102026644	+	0	NA	Intergenic	RSINE1|SINE|B4	-5935	NM_144942	246277	Mm.296382	NM_144942	ENSMUSG00000023044	Csad	Csd	cysteine sulfinic acid decarboxylase	protein-coding
unique_peak2-36603-8-14--0.901668177660948-0.660903317613906	chr2	177956456	177957268	+	0	NA	intron (NM_001007154, intron 1 of 12)	Lx8|LINE|L1	29073	NM_001007154	74189	Mm.44413	NM_028806	ENSMUSG00000027525	Phactr3	1500003N10Rik|4930415A02Rik|H17739|Scapin1|Scapinin|mKIAA4224	phosphatase and actin regulator 3	protein-coding
common_peak1-8026-17-16-0.130833496954699-0.356936432242225	chr1	169968848	169969905	+	0	NA	Intergenic	Intergenic	349687	NM_033652	110648	Mm.330081	NM_033652	ENSMUSG00000026686	Lmx1a	Lmx1.1|dr|dreher|sst	LIM homeobox transcription factor 1 alpha	protein-coding
unique_peak2-33647-4-6--0.830815435910851-0.989110657569874	chr11	99023744	99024186	+	0	NA	Intergenic	Intergenic	-7574	NM_007719	12775	Mm.2932	NM_007719	ENSMUSG00000037944	Ccr7	CD197|Cdw197|Cmkbr7|EBI1|Ebi1h	chemokine (C-C motif) receptor 7	protein-coding
unique_peak1-2320-10-3-1.35641534500877-1.75805390616669	chr15	83167226	83167691	+	0	NA	intron (NM_025445, intron 2 of 15)	intron (NM_025445, intron 2 of 15)	13219	NM_025445	66251	Mm.258910	NM_025445	ENSMUSG00000054277	Arfgap3	0610009H19Rik|1810004P07Rik|1810035F16Rik|9130416J18Rik|Arfgap1	ADP-ribosylation factor GTPase activating protein 3	protein-coding
common_peak1-19294-14-7-0.899216160357645-0.947446088118041	chr9	120769548	120770327	+	0	NA	Intergenic	B4A|SINE|B4	54431	NR_040742	76402	Mm.436588	NR_040742		1700020M21Rik	-	RIKEN cDNA 1700020M21 gene	ncRNA
common_peak2-24132-13-35--1.39145297080454-2.32006591355687	chr16	35363170	35363969	+	0	NA	intron (NM_133704, intron 1 of 6)	CpG	435	NM_133704	317717	Mm.259164	NM_133704	ENSMUSG00000034473	Sec22a	1810005C06Rik|Sec22l2	SEC22 vesicle trafficking protein homolog A (S. cerevisiae)	protein-coding
unique_peak2-38377-1-8--2.79698201165906-2.05605744720049	chr7	14622301	14622797	+	0	NA	Intergenic	Lx3C|LINE|L1	-47612	NM_001101534	434121	Mm.482762	NM_001101534	ENSMUSG00000074377	Sult2a4	EG434121|Gm5584	sulfotransferase family 2A, dehydroepiandrosterone (DHEA)-preferring, member 4	protein-coding
common_peak1-11777-28-29-0.146068524212944-0.357106932979091	chr16	45742309	45743086	+	0	NA	intron (NM_172511, intron 1 of 4)	intron (NM_172511, intron 1 of 4)	371	NM_001272070	213012	Mm.247453	NM_172511	ENSMUSG00000033157	Abhd10	-	abhydrolase domain containing 10	protein-coding
common_peak2-27038-22-30--0.30691220529947-0.399869693390336	chr2	180214202	180215730	+	0	NA	Intergenic	Intergenic	19283	NM_148933	108115	Mm.133687	NM_148933	ENSMUSG00000038963	Slco4a1	OATP-E|Slc21a12	solute carrier organic anion transporter family, member 4a1	protein-coding
unique_peak1-6773-24-4-2.47128180788035-4.69785539356838	chr8	61713382	61714247	+	0	NA	Intergenic	Intergenic	323262	NM_173411	234290	Mm.39244	NM_173411	ENSMUSG00000049946	BC030500	-	cDNA sequence BC030500	protein-coding
common_peak1-12963-8-5-0.420259917226415-1.10484139239135	chr19	3321358	3321883	+	0	NA	Intergenic	Intergenic	-1681	NM_013495	12894	Mm.18522	NM_013495	ENSMUSG00000024900	Cpt1a	C730027G07|CPTI|Cpt1	carnitine palmitoyltransferase 1a, liver	protein-coding
unique_peak1-636-9-1-2.18961340640422-2.31132995230379	chr10	42087718	42088205	+	0	NA	intron (NM_145743, intron 7 of 12)	intron (NM_145743, intron 7 of 12)	-91413	NM_019740	56484	Mm.338613	NM_019740	ENSMUSG00000048756	Foxo3	1110048B16Rik|2010203A17Rik|C76856|FKHRL1|Fkhr2|Foxo3a	forkhead box O3	protein-coding
common_peak1-15724-31-24-0.581382481038399-0.907273387067398	chr4	141565080	141566237	+	0	NA	intron (NM_177868, intron 1 of 31)	intron (NM_177868, intron 1 of 31)	1908	NM_177868	329977	Mm.252019	NM_028429	ENSMUSG00000051435	Fhad1	2900090M10Rik|B230311F11	forkhead-associated (FHA) phosphopeptide binding domain 1	protein-coding
common_peak2-25194-42-76--0.524457212827717-1.11338967587319	chr18	57877814	57879677	+	0	NA	intron (NM_029290, intron 6 of 6)	intron (NM_029290, intron 6 of 6)	-80506	NR_045360	70157	Mm.490532	NR_045360		2210409D07Rik	-	RIKEN cDNA 2210409D07 gene	ncRNA
common_peak1-11368-11-14--0.398197011356905-0.379391706698377	chr15	94543674	94544149	+	0	NA	intron (NM_178789, intron 2 of 7)	(CA)n|Simple_repeat|Simple_repeat	84295	NM_178789	320709	Mm.74873	NM_178789	ENSMUSG00000063296	Tmem117	B930062P21Rik	transmembrane protein 117	protein-coding
common_peak1-18810-9-7-0.18961340640422-1.05908390183068	chr9	88522511	88523027	+	0	NA	Intergenic	MuRRS-int|LTR|ERV1	-28688	NR_040766	320692	Mm.427378	NR_040766	ENSMUSG00000097073	9430037G07Rik	-	RIKEN cDNA 9430037G07 gene	ncRNA
unique_peak2-33879-1-5--2.2120195109379-1.32905871926422	chr12	29965373	29965659	+	0	NA	Intergenic	Intergenic	-247733	NM_001093775	17933	Mm.253067	NM_008666	ENSMUSG00000061911	Myt1l	2900046C06Rik|2900093J19Rik|C630034G21Rik|Nztf1|Pmng1|Png-1|mKIAA1106	myelin transcription factor 1-like	protein-coding
common_peak2-24982-20-8-1.31814978314888-1.77631109801764	chr18	9271101	9271643	+	0	NA	Intergenic	Intergenic	11435	NM_153086	225152	Mm.119273	NM_153086	ENSMUSG00000036855	Gjd4	9430022F06Rik|Cx39	gap junction protein, delta 4	protein-coding
common_peak2-27904-12-16--0.4386868561627-0.368541233333383	chr4	3835054	3835628	+	0	NA	intron (NM_019969, intron 4 of 5)	intron (NM_019969, intron 4 of 5)	30211	NM_019969	56711	Mm.331467	NM_019969	ENSMUSG00000003282	Plag1	-	pleiomorphic adenoma gene 1	protein-coding
common_peak1-10114-10-12--0.344024373132323-0.340565874754526	chr13	30109760	30110280	+	0	NA	Intergenic	MER2|DNA|MER2_type	-32088	NM_010093	13557	Mm.268356	NM_010093	ENSMUSG00000016477	E2f3	E2F3b|E2f3a	E2F transcription factor 3	protein-coding
common_peak1-13426-101-144-0.074105146721485-0.360261037462896	chr19	53943437	53945858	+	0	NA	Intergenic	MER5A1|DNA|MER1_type	-22074	NM_011050	18569	Mm.1605	NM_011050	ENSMUSG00000024975	Pdcd4	D19Ucla1|Ma3|Tis	programmed cell death 4	protein-coding
unique_peak1-588-9-2-1.60465090568306-1.87199725847353	chr10	12218867	12219413	+	0	NA	intron (NM_011682, intron 53 of 73)	L1Md_F2|LINE|L1	362393	NM_011682	22288	Mm.331784	NM_011682	ENSMUSG00000019820	Utrn	AA589569|DRP|Dmdl	utrophin	protein-coding
common_peak1-13776-20-38--0.797327434271056-1.23883036201157	chr2	37358799	37359481	+	0	NA	intron (NM_001033960, intron 12 of 18)	intron (NM_001033960, intron 12 of 18)	-13006	NM_177383	338346	Mm.445325	NM_177383		Gpr21	C230004C13Rik	G protein-coupled receptor 21	protein-coding
common_peak1-7439-25-18-0.613922391901521-0.86528749982161	chr1	181009974	181010857	+	0	NA	intron (NM_027188, intron 8 of 11)	intron (NM_027188, intron 8 of 11)	437719	NM_027188	69726	Mm.222338	NM_027188		Smyd3	2410008A19Rik|Zmynd1	SET and MYND domain containing 3	protein-coding
common_peak1-16818-105-123-0.367137600136291-1.35448344719036	chr6	48047079	48049435	+	0	NA	Intergenic	L1M5|LINE|L1	-11665	NM_001163475	69228	Mm.207555	NM_001163475	ENSMUSG00000057691	Zfp746	2810407L07Rik|AI317225|Znf746	zinc finger protein 746	protein-coding
unique_peak1-7069-9-0-3.18961340640422-3.01029995663981	chr9	14382704	14383127	+	0	NA	intron (NM_001081395, intron 3 of 12)	intron (NM_001081395, intron 3 of 12)	36529	NM_001081395	75723	Mm.159552	NM_001081395	ENSMUSG00000013076	Amotl1	2310010G08Rik|2310067L22Rik|4932416D09Rik|JEAP|mFLJ00155	angiomotin-like 1	protein-coding
common_peak2-25434-42-60--0.188408009695703-0.369634502458893	chr19	3851724	3852796	+	0	NA	exon (NM_001271496, exon 1 of 12)	exon (NM_001271496, exon 1 of 12)	487	NR_073190	12660	Mm.225505	NM_013490	ENSMUSG00000024843	Chka	CK|CK/EK-alpha|Chetk-alpha|Chk|ChoK|EK|EtnK-alpha	choline kinase alpha	protein-coding
unique_peak2-39590-2-9--2.23938235115068-1.87199725847353	chr9	76104045	76104368	+	0	NA	intron (NM_198962, intron 2 of 7)	intron (NM_198962, intron 2 of 7)	-42742	NM_205844	404194	Mm.213862	NM_205844	ENSMUSG00000059383	Gfral	AY457637|Gral	GDNF family receptor alpha like	protein-coding
common_peak1-11595-39-48-0.00105140280394522-0.303268666669768	chr16	17232962	17234318	+	0	NA	promoter-TSS (NM_178922)	promoter-TSS (NM_178922)	-40	NM_178922	58180	Mm.261602	NM_178922	ENSMUSG00000050240	Hic2	AA409108|HRG22|mKIAA1020	hypermethylated in cancer 2	protein-coding
common_peak2-23718-17-39--1.10363175668232-1.82978420966174	chr15	89765288	89766206	+	0	NA	Intergenic	Intergenic	-93456	NM_018803	54526	Mm.261601	NM_018803	ENSMUSG00000063260	Syt10	-	synaptotagmin X	protein-coding
unique_peak2-36611-7-12--0.901348887842903-1.31827279259406	chr2	180227235	180227838	+	0	NA	Intergenic	Intergenic	-7145	NM_018766	18216	Mm.301712	NM_018766	ENSMUSG00000027568	Ntsr1	NT-1R|NTR-1|NTR1	neurotensin receptor 1	protein-coding
common_peak2-24992-21-19-0.247561170378873-0.427564438475253	chr18	10617746	10618422	+	0	NA	intron (NM_009226, intron 1 of 3)	CpG	290	NM_009226	20641	Mm.603	NM_009226	ENSMUSG00000002477	Snrpd1	AA407109|AL023031|SMD1	small nuclear ribonucleoprotein D1	protein-coding
unique_peak1-832-14-4-1.57728806547028-2.4322161449009	chr11	8628889	8629444	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-64628	NM_001083587	319939	Mm.337820	NM_001083587	ENSMUSG00000020422	Tns3	BC023928|F830010I22Rik|TEM6|Tens1	tensin 3	protein-coding
unique_peak2-34014-7-8--0.370834171144123-1.00793137938329	chr12	104859658	104860133	+	0	NA	intron (NM_144834, intron 4 of 4)	L1Md_T|LINE|L1	9720	NM_144834	217847	Mm.29094	NM_144834	ENSMUSG00000061947	Serpina10	PZI|ZPI	serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10	protein-coding
unique_peak2-37135-7-10--0.660340788339108-1.12966497611638	chr4	19569439	19570121	+	0	NA	intron (NR_074089, intron 9 of 23)	intron (NR_074089, intron 9 of 23)	66371	NM_177327	107568	Mm.78312	NM_177327	ENSMUSG00000041058	Wwp1	8030445B08Rik|AIP5|SDRP1|Tiul1	WW domain containing E3 ubiquitin protein ligase 1	protein-coding
common_peak2-32328-6-6--0.241956811677302-0.947717972411649	chrX	73915234	73915542	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-67125	NM_001201395	74987	Mm.107996	NM_001201395	ENSMUSG00000079525	4930468A15Rik	-	RIKEN cDNA 4930468A15 gene	protein-coding
common_peak2-31931-7-10--0.660340788339108-1.12966497611638	chr9	63720903	63721271	+	0	NA	Intergenic	L1MEd|LINE|L1	-115286	NM_016769	17127	Mm.7320	NM_016769	ENSMUSG00000032402	Smad3	AU022421|Madh3	SMAD family member 3	protein-coding
common_peak2-22102-42-99--0.90152686190754-3.21797771275827	chr12	80258849	80261320	+	0	NA	intron (NM_016800, intron 4 of 5)	intron (NM_016800, intron 4 of 5)	13361	NM_016800	53612	Mm.265929	NM_016800	ENSMUSG00000021124	Vti1b	AU015348|GES30|MVti1b|SNARE|Vti1-rp1	vesicle transport through interaction with t-SNAREs 1B	protein-coding
common_peak2-22742-13-14--0.12841856497075-0.301029995663977	chr13	110967018	110967656	+	0	NA	intron (NM_023852, intron 3 of 4)	intron (NM_023852, intron 3 of 4)	103077	NM_023852	67295	Mm.151600	NM_023852	ENSMUSG00000021700	Rab3c	2700062I01Rik|3110015B08Rik|3110037E15Rik|AI850886	RAB3C, member RAS oncogene family	protein-coding
unique_peak1-2435-8-6-0.197867495889966-1.03789460276074	chr15	101414961	101415484	+	0	NA	intron (NM_016879, intron 1 of 3)	intron (NM_016879, intron 1 of 3)	3781	NR_002868	432985	Mm.491078	NR_002868		Gm5476	EG432985|Kb17P	type II keratin Kb17P pseudogene	pseudo
unique_peak2-39718-4-7--1.02346051385325-1.09384600808989	chr9	119444946	119445466	+	0	NA	intron (NM_001253860, intron 8 of 26)	intron (NM_001253860, intron 8 of 26)	26590	NM_001253860	20271	Mm.103584	NM_021544	ENSMUSG00000032511	Scn5a	Nav1.5|Nav1.5c|SkM1|SkM2|mH1	sodium channel, voltage-gated, type V, alpha	protein-coding
common_peak2-24501-29-47--0.472672420106045-0.683734619884041	chr17	25941283	25942303	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	-4237	NM_001164225	214931	Mm.152289	NM_001164225	ENSMUSG00000025738	Fbxl16	BC042620|Scirr1	F-box and leucine-rich repeat protein 16	protein-coding
common_peak2-31793-10-11--0.228547155712387-0.31137425193576	chr9	35098617	35099167	+	0	NA	Intergenic	Intergenic	10202	NR_040715	71133	Mm.158577	NR_040715		4933422A05Rik	-	RIKEN cDNA 4933422A05 gene	ncRNA
unique_peak1-4854-12-8-0.478850983645327-0.562038191119709	chr3	158905327	158906019	+	0	NA	intron (NR_040750, intron 4 of 4)	Lx2|LINE|L1	166345	NR_040750	624759	Mm.491054	NR_040750		Gm20752	-	predicted gene, 20752	ncRNA
unique_peak1-184-12-1-2.64877598508764-3.36932189928148	chr1	74851042	74851738	+	0	NA	TTS (NM_009518)	TTS (NM_009518)	12797	NM_009518	22409	Mm.5130	NM_009518		Wnt10a	-	wingless-type MMTV integration site family, member 10A	protein-coding
unique_peak2-33934-3-5--0.998945590680433-0.96108193396963	chr12	72086786	72087124	+	0	NA	intron (NM_011184, intron 5 of 10)	intron (NM_011184, intron 5 of 10)	11345	NM_011184	19167	Mm.296338	NM_011184		Psma3	Lmpc8	proteasome (prosome, macropain) subunit, alpha type 3	protein-coding
common_peak2-26385-10-10--0.103016273628528-0.301029995663987	chr2	50877912	50878399	+	0	NA	Intergenic	MTEa|LTR|MaLR	112951	NR_033595	227885	Mm.301654	NR_033595	ENSMUSG00000083270	Gm13498	OTTMUSG00000012426	heat shock protein 90 alpha (cytosolic), class B member 1 pseudogene	pseudo
unique_peak1-6423-7-9--0.522837264589173-1.05908390183068	chr7	89640870	89641364	+	0	NA	intron (NM_001190374, intron 7 of 29)	B4|SINE|B4	155921	NM_177894	330577	Mm.222812	NM_177894	ENSMUSG00000038570	Fam154b	1700129I04Rik|D030069K18	family with sequence similarity 154, member B	protein-coding
common_peak2-24686-56-52-0.507675370876044-1.21053550697015	chr17	43389256	43390618	+	0	NA	Intergenic	RSINE1|SINE|B4	-17359	NM_133776	77596	Mm.159950	NM_133776	ENSMUSG00000041293	Gpr110	5031409J19Rik|KPG_009	G protein-coupled receptor 110	protein-coding
common_peak1-13372-65-57-0.634184944349555-1.9234837731586	chr19	46337867	46340054	+	0	NA	intron (NM_178930, intron 13 of 39)	intron (NM_178930, intron 13 of 39)	-40267	NM_001177369	18034	Mm.102365	NM_019408	ENSMUSG00000025225	Nfkb2	NF-kappaB2|lyt|p49|p49/p100|p50B|p52	nuclear factor of kappa light polypeptide gene enhancer in B cells 2, p49/p100	protein-coding
common_peak2-29547-26-30--0.0262972182284127-0.301029995663988	chr6	40325293	40325982	+	0	NA	intron (NM_023538, intron 8 of 15)	intron (NM_023538, intron 8 of 15)	50160	NM_023538	69923	Mm.32840	NM_023538	ENSMUSG00000029916	Agk	2610037M15Rik|6720408I04Rik|AI465370|Mulk	acylglycerol kinase	protein-coding
common_peak1-14348-17-12-0.517856620063946-0.647240723060192	chr2	165287081	165287856	+	0	NA	intron (NM_054055, intron 1 of 12)	intron (NM_054055, intron 1 of 12)	11229	NM_054055	114644	Mm.250738	NM_054055	ENSMUSG00000018459	Slc13a3	NaDC-3|NaDC3|SDCT2	solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3	protein-coding
common_peak1-17582-42-36-0.532875962238234-1.0880568139457	chr7	39517057	39518156	+	0	NA	Intergenic	Intergenic	-204394	NM_001013810	434171	Mm.60990	NM_001013810	ENSMUSG00000060565	Gm5591	EG434171	predicted gene 5591	protein-coding
unique_peak2-39434-7-13--1.00826409175941-0.697979855752659	chr9	44768089	44768723	+	0	NA	intron (NM_145400, intron 2 of 19)	intron (NM_145400, intron 2 of 19)	5277	NM_145400	140630	Mm.215069	NM_145400	ENSMUSG00000059890	Ube4a	4732444G18Rik|9930123J21Rik|UFD2b	ubiquitination factor E4A	protein-coding
common_peak1-13008-11-10-0.0492619656143161-0.31137425193576	chr19	4838647	4839331	+	0	NA	promoter-TSS (NM_207268)	promoter-TSS (NM_207268)	333	NM_016892	12460	Mm.434411	NM_016892	ENSMUSG00000034108	Ccs	Ccsd	copper chaperone for superoxide dismutase	protein-coding
common_peak2-25608-8-7-0.00522241794757061-1.00793137938329	chr19	8926755	8927193	+	0	NA	3' UTR (NM_001013019, exon 2 of 2)	3' UTR (NM_001013019, exon 2 of 2)	1699	NM_001013019	68852	Mm.265792	NM_001013019	ENSMUSG00000071656	Lrrn4cl	1110067I12Rik	LRRN4 C-terminal like	protein-coding
common_peak2-24448-13-21--0.680959587999529-0.607095980551316	chr17	22817395	22818143	+	0	NA	Intergenic	MERVK26-int|LTR|ERVK	79654	NM_001104575	628185	Mm.390947	NM_001104575	ENSMUSG00000094921	Vmn2r112	EG628185|V2rp1	vomeronasal 2, receptor 112	protein-coding
unique_peak2-35308-3-7--1.41398308995928-1.23214870625617	chr17	13670017	13670395	+	0	NA	Intergenic	Intergenic	-44116	NR_030763	272667	Mm.444718	NR_030763	ENSMUSG00000079711	Smok4a	4930513D10Rik|Smok2c	sperm motility kinase 4A	pseudo
common_peak2-30358-6-9--0.75652998450706-1.11707584880836	chr7	28268114	28268590	+	0	NA	Intergenic	Intergenic	-3620	NM_018820	55942	Mm.153684	NM_018820	ENSMUSG00000008384	Sertad1	1110032C13Rik|AV000455|AW456625|Sei-1|Sei1|TRIP-Br1	SERTA domain containing 1	protein-coding
common_peak1-17911-9-12--0.510826311736872-0.394412252720706	chr7	125444483	125445071	+	0	NA	Intergenic	Intergenic	57356	NR_027879	67745	Mm.483404	NM_183267	ENSMUSG00000055159	4930583K01Rik	-	RIKEN cDNA 4930583K01 gene	ncRNA
unique_peak1-1412-8-2-1.42025991722641-1.65811743852845	chr12	79463336	79463868	+	0	NA	intron (NM_145965, intron 2 of 22)	Lx7|LINE|L1	135960	NM_145965	268566	Mm.341742	NM_145965	ENSMUSG00000047454	Gphn	5730552E08Rik|AI662856|BC027112|C230040D23|GPH|GPHRYN|geph	gephyrin	protein-coding
common_peak2-29957-26-18-0.679971578714877-0.959433126956265	chr6	118121997	118122905	+	0	NA	intron (NM_001080780, intron 11 of 18)	intron (NM_001080780, intron 11 of 18)	25311	NM_009050	19713	Mm.57199	NM_009050	ENSMUSG00000030110	Ret	PTC|RET51|RET9|c-Ret	ret proto-oncogene	protein-coding
unique_peak2-36231-5-9--1.02630843089322-1.21398586181642	chr2	35993875	35994389	+	0	NA	intron (NM_026422, intron 1 of 6)	intron (NM_026422, intron 1 of 6)	-1908	NR_027515	67889	Mm.205937	NM_026434	ENSMUSG00000026889	Rbm18	2010004P11Rik|AU015530	RNA binding motif protein 18	protein-coding
unique_peak2-34077-2-6--1.72480917832092-1.26211192963361	chr13	5822320	5822808	+	0	NA	Intergenic	Intergenic	34774	NR_045891	71867	Mm.179181	NR_045891		1700016G22Rik	-	RIKEN cDNA 1700016G22 gene	ncRNA
common_peak2-28626-58-61-0.341753624503622-0.804964541269708	chr5	25529766	25530670	+	0	NA	Intergenic	Intergenic	264374	NM_001004365	242894	Mm.150319	NM_001004365	ENSMUSG00000056367	Actr3b	9630005C02|ARP11|AW047569|Arp3b|Arp3beta	ARP3 actin-related protein 3B	protein-coding
common_peak1-14337-18-22--0.210642804828661-0.321718508207525	chr2	164548675	164549337	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	8201	NM_001040055	641368	Mm.422380	NM_001040055	ENSMUSG00000074593	Spint5	Gm14316|OTTMUSG00000016293	serine protease inhibitor, Kunitz type 5	protein-coding
common_peak2-27998-20-11-0.903112283870037-1.11267835143409	chr4	45408238	45408777	+	0	NA	TTS (NM_001009949)	TTS (NM_001009949)	13131	NM_001009949	230125	Mm.260210	NM_001009949	ENSMUSG00000045973	Slc25a51	9130208E07Rik|D130005A03Rik|Gm138|Mcart1	solute carrier family 25, member 51	protein-coding
unique_peak1-2063-9-1-2.18961340640422-2.31132995230379	chr15	32402556	32403019	+	0	NA	intron (NM_009154, intron 4 of 22)	intron (NM_009154, intron 4 of 22)	228219	NM_009154	20356	Mm.260374	NM_009154	ENSMUSG00000022231	Sema5a	5930434A13|9130201M22Rik|AI464145|Semaf|semF	sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A	protein-coding
common_peak2-24450-42-54--0.0390303856574761-0.30102999566397	chr17	23546417	23547531	+	0	NA	Intergenic	Lx3_Mus|LINE|L1	25204	NM_001104580	619697	Mm.469848	NM_001104580	ENSMUSG00000090966	Vmn2r116	EG619697|V2Rp5	vomeronasal 2, receptor 116	protein-coding
unique_peak1-7122-11-3-1.50869358425161-1.95434855131066	chr9	46446004	46446643	+	0	NA	Intergenic	MT2B|LTR|ERVL	-275363	NR_015605	73040	Mm.265384	NR_015605		2900052N01Rik	AU067665	RIKEN cDNA 2900052N01 gene	ncRNA
common_peak1-11644-14-17--0.270708841084668-0.328191099940267	chr16	22857805	22858466	+	0	NA	promoter-TSS (NM_001081368)	promoter-TSS (NM_001081368)	217	NM_001190804	67838	Mm.37516	NM_026400	ENSMUSG00000004460	Dnajb11	1810031F23Rik|ABBP-2|AL024055|Dj9|ERdj3|ERj3p	DnaJ (Hsp40) homolog, subfamily B, member 11	protein-coding
common_peak2-20584-11-16--0.578769256998726-0.503257505534083	chr10	78244216	78244839	+	0	NA	intron (NM_009200, intron 1 of 9)	intron (NM_009200, intron 1 of 9)	1286	NM_009200	20513	Mm.6257	NM_009200	ENSMUSG00000005357	Slc1a6	EAAT4	solute carrier family 1 (high affinity aspartate/glutamate transporter), member 6	protein-coding
unique_peak1-3519-12-4-1.32684789020028-2.04196296489515	chr19	17410892	17411525	+	0	NA	intron (NM_010265, intron 1 of 2)	intron (NM_010265, intron 1 of 2)	2787	NM_001136484	14537	Mm.244825	NM_010265	ENSMUSG00000038843	Gcnt1	5630400D21Rik|B130048E03|C2 GlcNAcT|C2GNT|IGnT	glucosaminyl (N-acetyl) transferase 1, core 2	protein-coding
common_peak1-12401-219-326-0.246086776646585-1.47157084425868	chr17	71001051	71003952	+	0	NA	intron (NM_001128180, intron 2 of 9)	(GGAGAA)n|Simple_repeat|Simple_repeat	91414	NM_001128181	224997	Mm.311840	NM_027712	ENSMUSG00000003279	Dlgap1	4933422O14Rik|9630002F18|AI845682|AI848168|BB075781|D17Bwg0511e|GKAP/SAPAP|GKPA/SAPAP|Gkap|Sapap1|mKIAA4162	discs, large (Drosophila) homolog-associated protein 1	protein-coding
common_peak1-9556-17-16-0.130833496954699-0.356936432242225	chr11	117534843	117535662	+	0	NA	intron (NM_198022, intron 1 of 21)	RLTR12B|LTR|ERVK	19649	NM_198022	217351	Mm.40272	NM_198022	ENSMUSG00000025571	Tnrc6c	9930033H14Rik|mKIAA1582	trinucleotide repeat containing 6C	protein-coding
common_peak2-30908-9-8-0.0196884049619079-1.03275496310833	chr7	143599705	143600040	+	0	NA	Intergenic	B3A|SINE|B2	-58774	NR_040459	330664	Mm.127762	NR_040459		C230079O03Rik	C230079O03	RIKEN cDNA C230079O03 gene	ncRNA
unique_peak2-35008-8-10--0.454209200689727-1.078512453669	chr15	100776615	100777108	+	0	NA	intron (NM_001077499, intron 2 of 26)	B1_Mur1|SINE|Alu	10159	NM_011323	20273	Mm.385012	NM_011323	ENSMUSG00000023033	Scn8a	AI853486|C630029C19Rik|NaCh6|Nav1.6|dmu|med|mnd-2|mnd2|nmf2|nmf335|nmf58|nur14|seal	sodium channel, voltage-gated, type VIII, alpha	protein-coding
common_peak2-30041-7-8--0.370834171144123-1.00793137938329	chr6	126487067	126487471	+	0	NA	Intergenic	Intergenic	-1696	NM_145983	16493	Mm.222831	NM_145983		Kcna5	Kv1.5	potassium voltage-gated channel, shaker-related subfamily, member 5	protein-coding
unique_peak1-4776-10-4-1.03448725012141-1.5150158574804	chr3	126294397	126295147	+	0	NA	Intergenic	L1M2|LINE|L1	-5097	NM_001293663	108058	Mm.255822	NM_023813	ENSMUSG00000053819	Camk2d	2810011D23Rik|8030469K03Rik|CaMK II|[d]-CaMKII	calcium/calmodulin-dependent protein kinase II, delta	protein-coding
common_peak1-14856-13-25--0.921967687503323-0.983972868822056	chr3	95106231	95106815	+	0	NA	intron (NM_001085383, intron 5 of 12)	intron (NM_001085383, intron 5 of 12)	4203	NM_001085383	71790	Mm.218844	NM_023628	ENSMUSG00000015702	Anxa9	1110003P15Rik|2310069F17Rik	annexin A9	protein-coding
common_peak2-24000-10-24--1.28744084476596-1.59083646988122	chr16	20477190	20477807	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-21392	NM_172265	224045	Mm.233855	NM_172265	ENSMUSG00000003235	Eif2b5	C81315	eukaryotic translation initiation factor 2B, subunit 5 epsilon	protein-coding
common_peak1-10762-10-19--0.965512749878593-0.917676348953458	chr14	70288950	70289595	+	0	NA	intron (NM_028560, intron 3 of 6)	intron (NM_028560, intron 3 of 6)	49058	NM_028526	73523	Mm.23509	NM_028526	ENSMUSG00000022085	Pebp4	PEBP-4	phosphatidylethanolamine binding protein 4	protein-coding
unique_peak2-35642-5-20--2.09669775878461-2.39372960542229	chr17	88597599	88598325	+	0	NA	Intergenic	Intergenic	73110	NM_001190356	225058	Mm.312053	NM_001190356		Gm4832	EG225058	predicted gene 4832	protein-coding
common_peak1-13832-8-5-0.420259917226415-1.10484139239135	chr2	59420312	59420773	+	0	NA	Intergenic	Intergenic	-29557	NM_198294	66860	Mm.27917	NM_198294	ENSMUSG00000035168	Tanc1	1200003E16Rik|Tanc|mKIAA1728	tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1	protein-coding
common_peak1-17872-31-15-1.22523867081312-2.38724857749548	chr7	115999601	116000779	+	0	NA	Intergenic	Lx|LINE|L1	-10668	NM_146725	258720	Mm.377654	NM_146725	ENSMUSG00000062434	Olfr516	MOR268-2	olfactory receptor 516	protein-coding
unique_peak1-3594-10-1-2.35641534500877-2.57096726280955	chr19	32173201	32173667	+	0	NA	intron (NM_018830, intron 2 of 23)	L1_Mur3|LINE|L1	4196	NM_018830	54447	Mm.491229	NM_018830	ENSMUSG00000024887	Asah2	AI585898	N-acylsphingosine amidohydrolase 2	protein-coding
unique_peak2-38351-3-11--1.99894559068043-1.95434855131066	chr7	3287017	3287580	+	0	NA	Intergenic	ERVL-E-int|LTR|ERVL	-1741	NM_001093764	50918	Mm.29874	NM_016969	ENSMUSG00000068566	Myadm	D7Wsu62e	myeloid-associated differentiation marker	protein-coding
common_peak2-19755-8-7-0.00522241794757061-1.00793137938329	chr1	77460627	77461101	+	0	NA	intron (NM_007936, intron 3 of 17)	intron (NM_007936, intron 3 of 17)	32479	NR_105770	102465180		NR_105770		Mir6352	mmu-mir-6352	microRNA mir-6352	ncRNA
unique_peak2-36384-2-16--3.00491709751366-3.53487848679804	chr2	119972335	119972820	+	0	NA	intron (NM_133838, intron 1 of 5)	B4|SINE|B4	7734	NM_133838	98878	Mm.132226	NM_133838	ENSMUSG00000027293	Ehd4	2210022F10Rik|AI197390|AI846352|AV006278|Past2	EH-domain containing 4	protein-coding
common_peak2-27729-9-7-0.18961340640422-1.05908390183068	chr3	123385500	123385933	+	0	NA	intron (NR_121616, intron 1 of 13)	RCHARR1|DNA|MER1_type	8054	NR_121616	83398	Mm.443908	NM_031186	ENSMUSG00000027977	Ndst3	4921531K01Rik|4930511P15Rik|N-HSST 3|NDST-3	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	protein-coding
common_peak2-19889-15-12-0.311725032414564-0.425539671739611	chr1	98079168	98079614	+	0	NA	Intergenic	L1_Rod|LINE|L1	-161056	NR_040467	73454	Mm.396229	NR_040467		1700063A18Rik	-	RIKEN cDNA 1700063A18 gene	ncRNA
common_peak1-11437-21-35--0.600435736176077-0.748982406290541	chr15	100303921	100304818	+	0	NA	intron (NM_134093, intron 4 of 8)	B3A|SINE|B2	4904	NM_134093	68614	Mm.275272	NM_134093	ENSMUSG00000037353	Letmd1	1110019O13Rik|AI593524|BB130465|BB235638|HCCR-2|HCCR1|MCC-32|Mccr	LETM1 domain containing 1	protein-coding
unique_peak1-4681-7-3-0.799090830298189-1.23214870625617	chr3	95231984	95232466	+	0	NA	intron (NR_033637, intron 1 of 2)	intron (NR_033637, intron 1 of 2)	954	NR_033637	100043305	Mm.412052	NR_033637		Gm4349	-	SET domain, bifurcated 1 pseudogene	pseudo
common_peak1-11690-65-86-0.0492224436283992-0.320772353720356	chr16	30527610	30529454	+	0	NA	intron (NM_172614, intron 9 of 9)	intron (NM_172614, intron 9 of 9)	22132	NM_172614	224090	Mm.241459	NM_172614		Tmem44	1700007N03Rik|9330161C17Rik|B230220N21	transmembrane protein 44	protein-coding
common_peak1-10813-16-8-0.948338640825749-1.02063122982878	chr14	79533778	79534557	+	0	NA	intron (NM_027906, intron 37 of 44)	intron (NM_027906, intron 37 of 44)	113007	NM_001033215	105590	Mm.486536	NM_001033215	ENSMUSG00000071262	Zfp957	AU017455	zinc finger protein 957	protein-coding
unique_peak1-1269-10-2-1.77145284428761-2.09384600808989	chr11	117574502	117575083	+	0	NA	intron (NM_198022, intron 3 of 21)	intron (NM_198022, intron 3 of 21)	59189	NM_198022	217351	Mm.40272	NM_198022	ENSMUSG00000025571	Tnrc6c	9930033H14Rik|mKIAA1582	trinucleotide repeat containing 6C	protein-coding
common_peak2-27164-24-13-0.985854980710112-1.52081014994907	chr3	30998668	30999329	+	0	NA	intron (NM_001039090, intron 2 of 6)	intron (NM_001039090, intron 2 of 6)	5018	NM_001039090	20482	Mm.15406	NM_011386	ENSMUSG00000027660	Skil	Skir|SnoN|sno	SKI-like	protein-coding
common_peak1-14459-63-134--0.638503005980241-2.48818451169834	chr3	33798807	33800812	+	0	NA	Intergenic	RMER6A|LTR|ERVK	-56577	NM_026222	51938	Mm.275710	NM_026222	ENSMUSG00000027676	Ccdc39	4921507O14Rik|AI447426|AI844750|D3Ertd789e|b2b1304Clo|b2b1735Clo|b2b2025.1Clo	coiled-coil domain containing 39	protein-coding
common_peak1-16795-23-11-1.13680500378792-1.66030262873422	chr6	42298854	42299741	+	0	NA	promoter-TSS (NM_011777)	promoter-TSS (NM_011777)	-530	NM_011777	22793	Mm.282303	NM_011777	ENSMUSG00000029860	Zyx	9530098H06Rik|R75157	zyxin	protein-coding
common_peak1-10352-10-9-0.0344872501214071-1.05503135781948	chr13	81136604	81137337	+	0	NA	intron (NR_015587, intron 1 of 1)	intron (NR_015587, intron 1 of 1)	33635	NR_015587	319983	Mm.343027	NR_015587	ENSMUSG00000097098	9330111N05Rik	-	RIKEN cDNA 9330111N05 gene	ncRNA
common_peak1-14884-26-22-0.404337136101449-0.569352520859861	chr3	96069988	96071212	+	0	NA	Intergenic	MER44B|DNA|MER2_type	-1977	NM_178215	319154	Mm.383293	NM_178215	ENSMUSG00000074403	Hist2h3b	H3-615|H3-616	histone cluster 2, H3b	protein-coding
common_peak2-21989-10-21--1.10301627362853-1.16735254179725	chr12	54695325	54696127	+	0	NA	intron (NM_013780, intron 3 of 11)	intron (NM_013780, intron 3 of 11)	346062	NM_013780	27386	Mm.247044	NM_013780	ENSMUSG00000021010	Npas3	4930423H22Rik|bHLHe12	neuronal PAS domain protein 3	protein-coding
common_peak2-19715-20-17-0.318149783148881-0.440610794044987	chr1	64956449	64957095	+	0	NA	intron (NM_001039493, intron 3 of 7)	intron (NM_001039493, intron 3 of 7)	46626	NM_001039493	241075	Mm.239534	NM_175509	ENSMUSG00000051344	Plekhm3	9430067K14Rik|A230102O09Rik|AI449570|DAPR|Plekhm1l	pleckstrin homology domain containing, family M, member 3	protein-coding
common_peak2-30665-7-7--0.200909169701811-0.97990265578305	chr7	101896311	101896660	+	0	NA	Intergenic	Intergenic	-1462662	NM_011858	23966	Mm.254610	NM_011858	ENSMUSG00000048078	Tenm4	Doc4|ELM2|Odz4|R75022|Ten-m4|l(7)-3Rn|l7Rn3|mKIAA1302	teneurin transmembrane protein 4	protein-coding
common_peak2-27187-8-11--0.579740082773585-1.14218153353838	chr3	36613043	36613432	+	0	NA	Intergenic	Intergenic	-24148	NM_019510	22065	Mm.74363	NM_019510	ENSMUSG00000027716	Trpc3	Mwk|Trcp3|Trp3|Trrp3	transient receptor potential cation channel, subfamily C, member 3	protein-coding
unique_peak2-35355-4-6--0.830815435910851-0.989110657569874	chr17	25920156	25920537	+	0	NA	TTS (NM_026238)	TTS (NM_026238)	1937	NM_026897	68977	Mm.29230	NM_026897	ENSMUSG00000061046	Haghl	1500017E18Rik|2810014I23Rik|C330022E15Rik	hydroxyacylglutathione hydrolase-like	protein-coding
common_peak2-26014-11-7-0.508693584251613-1.21681515183528	chr19	57180907	57181340	+	0	NA	intron (NM_001290813, intron 6 of 20)	intron (NM_001290813, intron 6 of 20)	12391	NM_001103178	226251	Mm.217161	NM_178688	ENSMUSG00000025085	Ablim1	2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059	actin-binding LIM protein 1	protein-coding
common_peak2-31007-37-27-0.718638149428215-1.38733277998641	chr8	10910043	10911146	+	0	NA	Intergenic	Intergenic	10672	NR_102285	71624	Mm.139075	NR_102285		4833411C07Rik	-	RIKEN cDNA 4833411C07 gene	ncRNA
common_peak2-31445-24-29--0.113680692840802-0.304839791830752	chr8	104395011	104396031	+	0	NA	Intergenic	RLTR10|LTR|ERVK	913490	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
common_peak2-27179-10-7-0.356415345008769-1.12966497611638	chr3	36000212	36000665	+	0	NA	Intergenic	RMER16-int|LTR|ERVK	35516	NM_172678	229211	Mm.260997	NM_172678		Acad9	2600017P15Rik|4732402K02|C630012L17Rik|NPD002	acyl-Coenzyme A dehydrogenase family, member 9	protein-coding
unique_peak1-1588-8-3-1.00522241794757-1.39487600375387	chr13	34189773	34190308	+	0	NA	intron (NR_046184, intron 2 of 4)	intron (NR_046184, intron 2 of 4)	15101	NR_046184	432745	Mm.159104	NR_046184		4930447K03Rik	-	RIKEN cDNA 4930447K03 gene	ncRNA
common_peak1-14345-61-89--0.109103766580334-0.346488640381782	chr2	164878936	164879972	+	0	NA	Intergenic	Intergenic	-1682	NM_170704	21939	Mm.271833	NM_011611	ENSMUSG00000017652	Cd40	AI326936|Bp50|GP39|HIGM1|IGM|IMD3|T-BAM|TRAP|Tnfrsf5|p50	CD40 antigen	protein-coding
common_peak1-18723-70-79-0.298038821488036-0.744766711958259	chr8	123101743	123103208	+	0	NA	exon (NM_001145897, exon 16 of 16)	exon (NM_001145897, exon 16 of 16)	10500	NM_178856	272551	Mm.275910	NM_178856		Gins2	2210013I18Rik|4833427B12Rik|AI323585|Pfs2	GINS complex subunit 2 (Psf2 homolog)	protein-coding
common_peak1-11916-20-53--1.26681271757228-3.16860498301544	chr17	35699828	35700771	+	0	NA	Intergenic	MLT1E2|LTR|MaLR	-4131	NM_175148	69542	Mm.265291	NM_175148	ENSMUSG00000039269	2300002M23Rik	Stg|emprin	RIKEN cDNA 2300002M23 gene	protein-coding
common_peak2-31427-33-40--0.026214442092555-0.301029995663988	chr8	94784596	94785720	+	0	NA	Intergenic	Intergenic	94861	NR_110452	71296	Mm.86664	NR_033641	ENSMUSG00000031736	Crnde	4933436C20Rik	colorectal neoplasia differentially expressed (non-protein coding)	ncRNA
unique_peak1-4527-9-2-1.60465090568306-1.87199725847353	chr3	30486527	30487062	+	0	NA	Intergenic	Intergenic	11998	NM_029690	76652	Mm.116928	NM_029690	ENSMUSG00000037737	Actrt3	1700119I24Rik|ARP-T3|Arpm1	actin related protein T3	protein-coding
common_peak2-19855-9-6-0.382258484346616-1.11707584880836	chr1	91577697	91578090	+	0	NA	intron (NR_015540, intron 1 of 3)	intron (NR_015540, intron 1 of 3)	2574	NR_015540	74403	Mm.444291	NR_015540		4933400F21Rik	1700091C04Rik|4930565K10Rik	RIKEN cDNA 4933400F21 gene	ncRNA
common_peak2-21248-28-30-0.0987628094345876-0.332062764479303	chr11	69059743	69060608	+	0	NA	Intergenic	Intergenic	-9651	NM_008192	14919	Mm.291816	NM_008192	ENSMUSG00000020890	Gucy2e	GC-E|GC1|ROS-GC1	guanylate cyclase 2e	protein-coding
common_peak1-17441-16-23--0.466698858453094-0.497202060940027	chr7	16312293	16313131	+	0	NA	Intergenic	L1_Mus2|LINE|L1	-23007	NM_145709	252829	Mm.222738	NM_145709		Obox5	C87544	oocyte specific homeobox 5	protein-coding
unique_peak2-35111-12-18--0.599151528355947-0.476916024233333	chr16	23984581	23985361	+	0	NA	intron (NM_009744, intron 1 of 9)	intron (NM_009744, intron 1 of 9)	3727	NM_009744	12053	Mm.347398	NM_009744	ENSMUSG00000022508	Bcl6	Bcl5	B cell leukemia/lymphoma 6	protein-coding
unique_peak1-4389-11-4-1.18676548936425-1.68134727924692	chr2	163693587	163694143	+	0	NA	intron (NM_183023, intron 2 of 5)	intron (NM_183023, intron 2 of 5)	14379	NM_001030292	241769	Mm.295337	NM_001030292	ENSMUSG00000035238	Kcnk15	KCNK11|KCNK14|KT3.3|TASK5	potassium channel, subfamily K, member 15	protein-coding
unique_peak1-1977-10-6-0.549060422951165-1.21398586181642	chr14	121362289	121362777	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	52117	NM_023579	70572	Mm.221452	NM_023579	ENSMUSG00000030662	Ipo5	1110011C18Rik|5730478E03Rik|AA409333|C76941|IMB3|Kpnb3|Ranbp5	importin 5	protein-coding
common_peak2-29141-135-128-0.746258147617207-5.24413062299542	chr5	125391918	125394772	+	0	NA	Intergenic	Intergenic	50270	NM_001081750	269704	Mm.138617	NM_001081750	ENSMUSG00000079215	Zfp664	AW060232|D930038J03Rik|ZFOC1|Znf664	zinc finger protein 664	protein-coding
unique_peak2-36843-3-7--1.41398308995928-1.23214870625617	chr3	89203245	89203504	+	0	NA	TTS (NR_040404)	TTS (NR_040404)	3198	NM_020517	57275	Mm.482283	NM_020517	ENSMUSG00000078173	Lenep	AU018355|Lep503	lens epithelial protein	protein-coding
common_peak1-15458-23-16-0.634304663258741-0.82304638657543	chr4	99193702	99194595	+	0	NA	Intergenic	RMER17B|LTR|ERVK	-128842	NM_010425	15221	Mm.4758	NM_010425	ENSMUSG00000067261	Foxd3	CWH3|Genesis|Hfh2	forkhead box D3	protein-coding
unique_peak1-6461-6-0-2.5653981103803-2.10720996964787	chr7	102330441	102330892	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-1028481	NM_011858	23966	Mm.254610	NM_011858	ENSMUSG00000048078	Tenm4	Doc4|ELM2|Odz4|R75022|Ten-m4|l(7)-3Rn|l7Rn3|mKIAA1302	teneurin transmembrane protein 4	protein-coding
common_peak2-26673-16-18--0.129663871175524-0.307235046933848	chr2	122377560	122378043	+	0	NA	Intergenic	L1_Mur1|LINE|L1	59212	NM_025961	67092	Mm.29975	NM_025961	ENSMUSG00000027199	Gatm	1810003P21Rik|AI314789|AT	glycine amidinotransferase (L-arginine:glycine amidinotransferase)	protein-coding
common_peak1-9182-26-31--0.0721009078415378-0.304589945962371	chr11	78535585	78536212	+	0	NA	Intergenic	Intergenic	-24971	NM_008702	18099	Mm.9001	NM_008702	ENSMUSG00000017376	Nlk	AI194375	nemo like kinase	protein-coding
common_peak2-19928-8-12--0.695217300193522-0.475924844171029	chr1	127233573	127234059	+	0	NA	Intergenic	Intergenic	98488	NM_023735	74117	Mm.183102	NM_023735	ENSMUSG00000026341	Actr3	1200003A09Rik|Arp3	ARP3 actin-related protein 3	protein-coding
common_peak1-19214-48-36-0.761473785605864-1.92045994443867	chr9	106159644	106160448	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-9761	NM_020559	11655	Mm.290578	NM_020559	ENSMUSG00000032786	Alas1	ALAS|ALAS-N|Alas-1|Alas-h	aminolevulinic acid synthase 1	protein-coding
common_peak1-12125-22-28--0.210696890040167-0.337923771396236	chr17	26780717	26781757	+	0	NA	intron (NM_026170, intron 9 of 9)	intron (NM_026170, intron 9 of 9)	-32104	NM_025272	11974	Mm.22602	NM_025272	ENSMUSG00000015575	Atp6v0e	Atp6k|Atp6v0e1|M9.2	ATPase, H+ transporting, lysosomal V0 subunit E	protein-coding
unique_peak2-37360-6-5--0.0195643903408542-0.947717972411649	chr4	134760697	134761112	+	0	NA	Intergenic	Intergenic	67771	NM_013885	29876	Mm.257765	NM_013885	ENSMUSG00000037242	Clic4	D0Jmb3|TU-74|mc3s5|mtCLIC	chloride intracellular channel 4 (mitochondrial)	protein-coding
common_peak1-13851-64-68-0.356921944930434-0.859353189187952	chr2	61593100	61594539	+	0	NA	intron (NM_021526, intron 3 of 11)	intron (NM_021526, intron 3 of 11)	44068	NM_021526	59029	Mm.218198	NM_021526	ENSMUSG00000026914	Psmd14	2610312C03Rik|3200001M20Rik|AA986732|Pad1|Poh1|rpm11	proteasome (prosome, macropain) 26S subunit, non-ATPase, 14	protein-coding
common_peak2-31065-85-132--0.0998791873765388-0.355325645099032	chr8	22476076	22477552	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-10115	NM_007844	13218	Mm.304264	NM_007844	ENSMUSG00000074437	Defa-rs1	2010300L12Rik|2010319H24Rik|CRS1C|CRS1C-2|CRS1C-5|Defcr-rs1	defensin, alpha, related sequence 1	protein-coding
unique_peak2-35324-3-10--1.87341470859657-1.75805390616669	chr17	17791377	17791974	+	0	NA	Intergenic	Intergenic	-30222	NM_172827	240028	Mm.328807	NM_172827	ENSMUSG00000023845	Lnpep	2010309L07Rik|4732490P18Rik|CAP|IRAP|PLAP|gp160|vp165	leucyl/cystinyl aminopeptidase	protein-coding
unique_peak1-7412-8-1-2.00522241794757-2.05605744720049	chrX	136733687	136734179	+	0	NA	Intergenic	PB1|SINE|Alu	-111554	NR_037208	100499512		NR_037208		Mir3475	mmu-mir-3475	microRNA 3475	ncRNA
common_peak2-30824-20-42--0.938189970110905-1.68120055799038	chr7	130546868	130547507	+	0	NA	intron (NM_025304, intron 4 of 10)	intron (NM_025304, intron 4 of 10)	25691	NM_025304	30949	Mm.260527	NM_025304	ENSMUSG00000030763	Lcmt1	AL033290|LCMT-1|Lcmt	leucine carboxyl methyltransferase 1	protein-coding
common_peak2-30145-5-8--0.874305337448166-1.10484139239135	chr6	145745911	145746270	+	0	NA	Intergenic	Intergenic	-10813	NM_027760	71323	Mm.158669	NM_027760	ENSMUSG00000030259	Rassf8	5133400D11Rik|AA815821|AW123240|Hoj1|mHoj-1	Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	protein-coding
common_peak2-30508-13-14--0.12841856497075-0.301029995663977	chr7	65467667	65468393	+	0	NA	Intergenic	Intergenic	-445542	NM_009728	11982	Mm.135129	NM_009728	ENSMUSG00000025324	Atp10a	Atp10c|pfatp	ATPase, class V, type 10A	protein-coding
common_peak1-14633-41-51-0.000708986707568471-0.303138254425616	chr3	56182841	56184044	+	0	NA	Intergenic	L1Md_A|LINE|L1	-195819	NM_030595	26422	Mm.384353	NM_030595	ENSMUSG00000027799	Nbea	Lyst2|mKIAA1544	neurobeachin	protein-coding
common_peak2-24685-25-18-0.613922391901521-0.86528749982161	chr17	43326791	43327369	+	0	NA	Intergenic	Intergenic	-31840	NR_045153	545207	Mm.329050	NR_045153		E130008D07Rik	-	RIKEN cDNA E130008D07 gene	ncRNA
common_peak1-12106-26-48--0.686810751956746-1.2112076832151	chr17	26138635	26139503	+	0	NA	intron (NM_153140, intron 5 of 11)	MERVL_2A-int|LTR|ERVL	19736	NM_153140	215445	Mm.41191	NM_153140	ENSMUSG00000037098	Rab11fip3	Cart1|D030060O14Rik|Rab11-FIP3|mKIAA0665	RAB11 family interacting protein 3 (class II)	protein-coding
common_peak2-26841-13-8-0.608547029195456-0.660903317613904	chr2	153274460	153274927	+	0	NA	intron (NM_001134300, intron 4 of 10)	intron (NM_001134300, intron 4 of 10)	-4478	NM_001001986	329540	Mm.50600	NM_001001986	ENSMUSG00000061411	Nol4l	4931410H15|8430427H17Rik|AI429157|Gm1636	nucleolar protein 4-like	protein-coding
common_peak1-10039-6-7--0.434601889619698-0.97990265578305	chr13	15659701	15660215	+	0	NA	intron (NM_008130, intron 3 of 14)	MTEa|LTR|MaLR	104402	NM_008130	14634	Mm.5098	NM_008130	ENSMUSG00000021318	Gli3	AI854843|AU023367|Bph|GLI3-190|GLI3FL|Pdn|Xt|add	GLI-Kruppel family member GLI3	protein-coding
unique_peak2-33852-7-24--1.84476535947653-2.44150343356329	chr12	17288284	17289349	+	0	NA	intron (NM_027959, intron 11 of 12)	intron (NM_027959, intron 11 of 12)	15415	NM_027959	71853	Mm.222825	NM_027959	ENSMUSG00000020571	Pdia6	1700015E05Rik|AL023058|C77895|CaBP5|P5|Txndc7	protein disulfide isomerase associated 6	protein-coding
common_peak1-7594-35-52--0.296550196100695-0.486454540233415	chr1	56971970	56973310	+	0	NA	intron (NM_139146, intron 3 of 10)	intron (NM_139146, intron 3 of 10)	55538	NM_139146	212712	Mm.145599	NM_139146	ENSMUSG00000038331	Satb2	mKIAA1034	special AT-rich sequence binding protein 2	protein-coding
unique_peak2-34394-6-10--0.894033508256995-1.21398586181642	chr14	46595896	46596429	+	0	NA	Intergenic	L1VL4|LINE|L1	-107540	NR_002875	218963	Mm.282093	NR_002875		Gm1821	-	ubiquitin pseudogene	pseudo
unique_peak2-35103-0-7--3.84013093047421-1.80617997398389	chr16	21205510	21205941	+	0	NA	intron (NM_010143, intron 1 of 15)	intron (NM_010143, intron 1 of 15)	857	NM_010143	13845	Mm.6972	NM_010143	ENSMUSG00000005958	Ephb3	AW456895|Cek10|Etk2|HEK2|MDK5|Sek4|Tyro6	Eph receptor B3	protein-coding
common_peak1-8771-27-29-0.0846553552867171-0.333081040816753	chr11	6528096	6528848	+	0	NA	Intergenic	Intergenic	-2402	NM_134011	21379	Mm.247761	NM_134011	ENSMUSG00000000384	Tbrg4	2310042P22Rik|AA120735|AA408001|AI527316|Cpr2|R74877|Tb-12|mKIAA0948	transforming growth factor beta regulated gene 4	protein-coding
unique_peak2-32492-2-4--1.23938235115068-0.931118710592187	chr1	43785174	43785504	+	0	NA	Intergenic	MusHAL1|LINE|L1	-2108	NM_024283	78896	Mm.50109	NM_024283	ENSMUSG00000026051	1500015O10Rik	Ecrg4	RIKEN cDNA 1500015O10 gene	protein-coding
common_peak2-20882-208-123-1.55526911632446-27.3752661277982	chr11	3125345	3128926	+	0	NA	intron (NM_001166547, intron 7 of 18)	RSINE1|SINE|B4	24113	NM_001166549	74203	Mm.255649	NM_023743	ENSMUSG00000020454	Eif4enif1	2610509L04Rik|A930019J01Rik|AA410001|AU021239|Clast4|D11Ertd166e	eukaryotic translation initiation factor 4E nuclear import factor 1	protein-coding
common_peak1-9692-24-41--0.599107520011044-0.83607543869935	chr12	17544860	17545631	+	0	NA	Intergenic	Intergenic	-6434	NM_013614	18263	Mm.34102	NM_013614	ENSMUSG00000011179	Odc1	ODC	ornithine decarboxylase, structural 1	protein-coding
common_peak1-15732-10-7-0.356415345008769-1.12966497611638	chr4	147941367	147941801	+	0	NA	intron (NM_016699, intron 11 of 24)	B1_Mur4|SINE|Alu	9048	NM_016699	50912	Mm.266635	NM_016699	ENSMUSG00000017264	Exosc10	PM-Scl|PM/Scl-100|Pmscl2|RRP6|p2|p3|p4	exosome component 10	protein-coding
unique_peak2-33484-5-12--1.40482005414695-1.62698961692433	chr11	70191771	70192389	+	0	NA	Intergenic	Intergenic	-26547	NM_009660	11687	Mm.4584	NM_009660	ENSMUSG00000018924	Alox15	12-LO|12/15-LO|15-LOX|Alox12l|L-12LO	arachidonate 15-lipoxygenase	protein-coding
common_peak2-29755-15-6-1.20480982849805-1.32521814697968	chr6	86596062	86596467	+	0	NA	TTS (NM_010751)	TTS (NM_010751)	18096	NM_026414	67855	Mm.183043	NM_026414	ENSMUSG00000033508	Asprv1	2300003P22Rik|AA986851|SASP|SASPase|Taps	aspartic peptidase, retroviral-like 1	protein-coding
unique_peak1-3027-9-1-2.18961340640422-2.31132995230379	chr18	35536539	35537041	+	0	NA	intron (NM_030749, intron 3 of 9)	B3|SINE|B2	121789	NM_030749	81500	Mm.291482	NM_030749	ENSMUSG00000024357	Sil1	1810057E01Rik|AI042831|wz	endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)	protein-coding
common_peak1-11494-13-8-0.608547029195456-0.660903317613904	chr15	102571612	102572252	+	0	NA	Intergenic	Intergenic	5408	NR_104334	102216269		NR_104334		Cistr-act	Cistr	chondrogenic regulator lncRNA	ncRNA
common_peak2-25693-3-6--1.22133801201688-1.08602067057793	chr19	16372994	16373385	+	0	NA	intron (NM_008139, intron 2 of 6)	Lx|LINE|L1	16305	NR_105832	102465218		NR_105832	miRBase:MI0021942	Mir496b	mmu-mir-496b	microRNA mir-496b	ncRNA
unique_peak1-1910-6-4-0.24347001549294-0.989110657569874	chr14	69994766	69995284	+	0	NA	Intergenic	MTB_Mm|LTR|MaLR	-14258	NM_033325	94352	Mm.116714	NM_033325	ENSMUSG00000034205	Loxl2	1110004B06Rik|4930526G11Rik|9430067E15Rik	lysyl oxidase-like 2	protein-coding
unique_peak2-37168-1-6--2.43441193227435-1.56314192529759	chr4	45528294	45528847	+	0	NA	intron (NM_001033306, intron 1 of 5)	intron (NM_001033306, intron 1 of 5)	15130	NM_001033306	230126	Mm.251716	NM_001033306	ENSMUSG00000044813	Shb	BC028832	src homology 2 domain-containing transforming protein B	protein-coding
common_peak2-26249-24-37--0.454717610675869-0.572500200098104	chr2	29944758	29945809	+	0	NA	intron (NM_153805, intron 18 of 21)	intron (NM_153805, intron 18 of 21)	3872	NM_025428	66220	Mm.22538	NM_025428	ENSMUSG00000015335	Zdhhc12	1190004A01Rik	zinc finger, DHHC domain containing 12	protein-coding
common_peak1-11908-68-104--0.144284738367826-0.389446716778299	chr17	26507523	26509367	+	0	NA	Intergenic	Intergenic	-43465	NM_001081656	240055	Mm.133211	NM_001081656	ENSMUSG00000034413	Neurl1b	C230078M08Rik|EG240055	neuralized homolog 1b (Drosophila)	protein-coding
common_peak1-17115-32-37-0.0311645057760748-0.312460117298692	chr6	114874602	114875923	+	0	NA	Intergenic	Intergenic	-3492	NM_177683	232334	Mm.268357	NM_177683		Vgll4	BC048841|VGL-4	vestigial like 4 (Drosophila)	protein-coding
common_peak2-26794-20-26--0.266812717572275-0.373496418836697	chr2	148040456	148041329	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-168187	NM_010446	15376	Mm.938	NM_010446	ENSMUSG00000037025	Foxa2	HNF3-beta|HNF3beta|Hnf-3b|Hnf3b|Tcf-3b|Tcf3b	forkhead box A2	protein-coding
unique_peak1-5661-17-2-2.63333383748388-3.75443312462699	chr6	30462060	30462835	+	0	NA	exon (NM_029373, exon 1 of 3)	exon (NM_029373, exon 1 of 3)	161	NM_029373	75647	Mm.46117	NM_027073	ENSMUSG00000029784	Ssmem1	1700016K02Rik|1700025E21Rik	serine-rich single-pass membrane protein 1	protein-coding
unique_peak2-33858-1-8--2.79698201165906-2.05605744720049	chr12	17738253	17738775	+	0	NA	intron (NM_016677, intron 1 of 3)	URR1B|DNA|MER1_type	40894	NM_016677	53602	Mm.313619	NM_016677	ENSMUSG00000071379	Hpcal1	NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3	hippocalcin-like 1	protein-coding
common_peak2-28402-13-7-0.778472030637769-0.817533494790411	chr4	140657856	140658280	+	0	NA	intron (NM_177867, intron 7 of 14)	intron (NM_177867, intron 7 of 14)	13808	NM_177867	329972	Mm.247201	NM_177867	ENSMUSG00000045004	Spata21	4933414G08	spermatogenesis associated 21	protein-coding
unique_peak1-5336-10-2-1.77145284428761-2.09384600808989	chr5	90625180	90625721	+	0	NA	Intergenic	MuRRS4-int|LTR|ERV1	27571	NR_028088	231430	Mm.319697	NM_001033310	ENSMUSG00000035505	Cox18	BC038311	cytochrome c oxidase assembly protein 18	protein-coding
common_peak1-12044-12-15--0.351224014912361-0.332077462497413	chr17	21516383	21517126	+	0	NA	Intergenic	Intergenic	-3958	NM_172486	210503	Mm.33443	NM_172486	ENSMUSG00000062743	Zfp677	A830058L05Rik|Tce8	zinc finger protein 677	protein-coding
unique_peak1-3916-9-5-0.604650905683064-1.21398586181642	chr2	24562420	24562993	+	0	NA	intron (NM_001042528, intron 10 of 46)	intron (NM_001042528, intron 10 of 46)	55966	NM_001042528	12287	Mm.4424	NM_007579	ENSMUSG00000004113	Cacna1b	AW050276|AW060892|AW822256|Cav2.2|Cchn1a|alpha(1B)	calcium channel, voltage-dependent, N type, alpha 1B subunit	protein-coding
common_peak2-25770-27-8-1.82162094945292-3.64934937127727	chr19	32303965	32304439	+	0	NA	intron (NM_144792, intron 4 of 9)	MLT1E|LTR|MaLR	-18699	NM_001168526	208449	Mm.329810	NM_144792	ENSMUSG00000040451	Sgms1	9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23	sphingomyelin synthase 1	protein-coding
common_peak1-16438-21-11-0.984526764545079-1.3750876294627	chr5	134951010	134951941	+	0	NA	Intergenic	RLTR9F|LTR|ERVK	-18889	NM_001081464	57080	Mm.332735	NM_020331	ENSMUSG00000023079	Gtf2ird1	1700012P16Rik|BEN|Cream1|ESTM9|GTF3|Gtf2il|MusTRD1|Tg(Alb1-Myc)166.8Sst|WBSCR11|X83320	general transcription factor II I repeat domain-containing 1	protein-coding
unique_peak2-34289-1-4--1.94898510510411-1.10720996964787	chr13	73970831	73971125	+	0	NA	intron (NM_028186, intron 3 of 9)	intron (NM_028186, intron 3 of 9)	14101	NM_028186	72293	Mm.45506	NM_028186	ENSMUSG00000021567	Nkd2	2210403L10Rik|AW212591	naked cuticle 2 homolog (Drosophila)	protein-coding
common_peak2-24280-8-12--0.695217300193522-0.475924844171029	chr16	97534621	97535211	+	0	NA	Intergenic	RMER1B|Other|Other	-43419	NM_019517	56175	Mm.97885	NM_019517	ENSMUSG00000040605	Bace2	1110059C24Rik|AEPLC|AI850424|ALP56|ARP1|ASP21|BAE2|CDA13|CEAP1|DRAP	beta-site APP-cleaving enzyme 2	protein-coding
common_peak1-9252-10-14--0.550475250599749-0.446472590016315	chr11	86683404	86683959	+	0	NA	Intergenic	RSINE1|SINE|B4	-62519	NM_026191	67487	Mm.260627	NM_026191	ENSMUSG00000018425	Dhx40	2410016C14Rik|ARG147|DDX40|PAD	DEAH (Asp-Glu-Ala-His) box polypeptide 40	protein-coding
unique_peak1-5994-6-0-2.5653981103803-2.10720996964787	chr6	99853080	99853541	+	0	NA	Intergenic	Intergenic	-176924	NM_001170419	50501	Mm.87365	NM_015768	ENSMUSG00000030069	Prok2	Bv8|PK2|Prok1	prokineticin 2	protein-coding
common_peak1-14441-21-33--0.517973575984104-0.610902792227722	chr2	181520428	181521186	+	0	NA	intron (NM_001171615, intron 2 of 22)	intron (NM_001171615, intron 2 of 22)	-10205	NM_001171680	17932	Mm.458718	NM_008665	ENSMUSG00000010505	Myt1	Nzf2|Nzf2a|Nzf2b|Nztf2	myelin transcription factor 1	protein-coding
common_peak2-31687-32-27-0.471737097162056-0.777451270049544	chr8	128025237	128026051	+	0	NA	Intergenic	Intergenic	-9034	NM_001081337	244668	Mm.271668	NM_001081337	ENSMUSG00000001995	Sipa1l2	BC058408|mKIAA1389	signal-induced proliferation-associated 1 like 2	protein-coding
unique_peak2-35433-8-7-0.00522241794757061-1.00793137938329	chr17	34931905	34932356	+	0	NA	Intergenic	Intergenic	9241	NM_009995	13079	Mm.440407	NM_009995	ENSMUSG00000024365	Cyp21a1	21-OH|21OH|21OHA|21OHB|CYP21OH-A|Cyp21|Cyp21-ps1|Cyp21B|Cyp21a2-ps|Cyp21a2ps|Oh21-1|Oh21-2	cytochrome P450, family 21, subfamily a, polypeptide 1	protein-coding
unique_peak1-5648-7-0-2.79909083029819-2.40823996531185	chr6	28762537	28762927	+	0	NA	intron (NM_019776, intron 16 of 23)	intron (NM_019776, intron 16 of 23)	19015	NM_138682	192198	Mm.443660	NM_138682	ENSMUSG00000049939	Lrrc4	MBAG1|NGL-2|NLG-2|Nag14	leucine rich repeat containing 4	protein-coding
unique_peak1-1730-11-3-1.50869358425161-1.95434855131066	chr13	98942292	98942870	+	0	NA	intron (NM_012026, intron 1 of 35)	intron (NM_012026, intron 1 of 35)	33539	NM_012026	110596	Mm.252718	NM_012026	ENSMUSG00000021662	Arhgef28	9230110L08Rik|AI323540|D13Bwg1089e|RIP2|Rgnef|RhoGEF|Rhoip2|p190RhoGEF	Rho guanine nucleotide exchange factor (GEF) 28	protein-coding
unique_peak2-33137-7-5-0.214128329577033-1.01466476204226	chr10	82795062	82795495	+	0	NA	intron (NM_177388, intron 1 of 10)	B1_Mur1|SINE|Alu	5284	NM_177388	338365	Mm.67073	NM_177388	ENSMUSG00000034591	Slc41a2	A230035L05Rik|SLC41A1-L1	solute carrier family 41, member 2	protein-coding
common_peak2-32051-9-24--1.4542427833705-1.83731222263754	chr9	83834120	83834646	+	0	NA	Intergenic	Intergenic	-8005	NM_199195	12040	Mm.12819	NM_199195	ENSMUSG00000032263	Bckdhb	-	branched chain ketoacid dehydrogenase E1, beta polypeptide	protein-coding
unique_peak2-36520-5-10--1.16381195464315-1.33892459842472	chr2	162961059	162961583	+	0	NA	Intergenic	Intergenic	-45984	NM_026630	68236	Mm.33648	NM_026630		Gtsf1l	2410116G06Rik	gametocyte specific factor 1-like	protein-coding
unique_peak2-36381-1-8--2.79698201165906-2.05605744720049	chr2	119263409	119263870	+	0	NA	intron (NM_026574, intron 14 of 35)	intron (NM_026574, intron 14 of 35)	39726	NM_026574	68142	Mm.330496	NM_026574	ENSMUSG00000034154	Ino80	2310079N15Rik|4632409L19Rik|Inoc1	INO80 homolog (S. cerevisiae)	protein-coding
unique_peak1-2642-11-0-3.50869358425161-3.61235994796777	chr16	45073158	45073769	+	0	NA	Intergenic	RMER10A|LTR|ERVL	-20703	NM_026439	67896	Mm.181074	NM_026439	ENSMUSG00000022665	Ccdc80	2610001E17Rik|DRO1|Ssg1|Urb	coiled-coil domain containing 80	protein-coding
common_peak1-14134-28-31-0.0529591198214625-0.314603908022751	chr2	131179343	131180321	+	0	NA	Intergenic	Intergenic	-1204	NM_178607	51902	Mm.477523	NM_178607	ENSMUSG00000048911	Rnf24	2810473M14Rik|4930505A13Rik|AI317164|C86507|D2Ertd504e	ring finger protein 24	protein-coding
unique_peak2-34316-4-12--1.72390023199434-1.85743853830261	chr13	95484721	95485416	+	0	NA	Intergenic	Intergenic	-73830	NM_009321	21371	Mm.379025	NM_009321	ENSMUSG00000042043	Tbca	Tbca13	tubulin cofactor A	protein-coding
unique_peak2-38846-2-7--1.91745425626332-1.45399745587252	chr7	143783243	143783698	+	0	NA	Intergenic	Intergenic	118817	NR_046021	621677	Mm.207290	NR_046021		Gm6249	EG621677	predicted gene 6249	ncRNA
common_peak2-28786-11-17--0.661231417190699-0.58239619684445	chr5	63968228	63968917	+	0	NA	Intergenic	Intergenic	-71770	NM_177006	319807	Mm.319487	NM_028470	ENSMUSG00000090061	Nwd2	3110047P20Rik|B830017A01Rik|Hn1-ps2|mKIAA1239	NACHT and WD repeat domain containing 2	protein-coding
unique_peak1-5876-9-6-0.382258484346616-1.11707584880836	chr6	86476362	86476874	+	0	NA	promoter-TSS (NM_011865)	promoter-TSS (NM_011865)	-459	NM_011865	23983	Mm.274146	NM_011865	ENSMUSG00000051695	Pcbp1	WBP17|[a]CP-1|alphaCP-1	poly(rC) binding protein 1	protein-coding
common_peak1-10606-16-21--0.341167976369236-0.392630012299441	chr14	31963674	31964492	+	0	NA	intron (NM_138672, intron 30 of 68)	intron (NM_138672, intron 30 of 68)	16044	NM_027289	70021	Mm.261681	NM_027289	ENSMUSG00000071547	Nt5dc2	2510015F01Rik	5'-nucleotidase domain containing 2	protein-coding
common_peak1-10253-12-11-0.0638134843664826-0.337263207250336	chr13	55105334	55105962	+	0	NA	intron (NM_153131, intron 14 of 15)	L2c|LINE|L2	16532	NM_001206390	212032	Mm.267479	NM_001033245	ENSMUSG00000025877	Hk3	HK III|HK-III	hexokinase 3	protein-coding
common_peak1-12340-39-81--0.74179075769893-2.02918808266059	chr17	55944277	55945683	+	0	NA	intron (NM_139138, intron 11 of 16)	intron (NM_139138, intron 11 of 16)	55731	NM_139138	52614	Mm.210497	NM_139138	ENSMUSG00000032915	Emr4	D17Ertd479e|Egf-tm7|Fire|Gpr127	EGF-like module containing, mucin-like, hormone receptor-like sequence 4	protein-coding
common_peak2-31586-23-19-0.399839409621718-0.538442145997695	chr8	120494946	120495656	+	0	NA	Intergenic	MTC|LTR|MaLR	-169472	NM_026758	68533	Mm.181836	NM_026758	ENSMUSG00000031843	Mphosph6	1110001M01Rik|AA536809|C86426	M phase phosphoprotein 6	protein-coding
unique_peak1-4549-16-7-1.11826364226806-1.23399803405144	chr3	38462481	38463223	+	0	NA	Intergenic	Intergenic	-79114	NM_001167883	99696	Mm.290937	NM_001033198	ENSMUSG00000044864	Ankrd50	AI662170|E430012K20Rik|mKIAA1223|mKIAA3019	ankyrin repeat domain 50	protein-coding
common_peak2-30892-31-31-0.225238670813123-0.416139936131877	chr7	142060356	142061183	+	0	NA	intron (NM_001033420, intron 25 of 51)	intron (NM_001033420, intron 25 of 51)	69344	NM_001143802	627214	Mm.323610	NM_001143802	ENSMUSG00000073805	Fam196a	B830028B13Rik	family with sequence similarity 196, member A	protein-coding
common_peak1-7666-34-52--0.345851927561933-0.532475415427916	chr1	75141330	75142959	+	0	NA	intron (NM_170755, intron 7 of 8)	intron (NM_170755, intron 7 of 8)	2784	NM_170755	227298	Mm.273062	NM_170755	ENSMUSG00000049339	Fam134a	-	family with sequence similarity 134, member A	protein-coding
unique_peak2-33398-5-5--0.289342836727009-0.909929411522249	chr11	52537397	52537803	+	0	NA	Intergenic	Intergenic	-40608	NM_177059	320027	Mm.44518	NM_177059		Fstl4	B230374F23Rik|SPIG1|mKIAA1061	follistatin-like 4	protein-coding
common_peak2-22783-24-50--0.879215439203779-1.66691574198013	chr14	96517694	96518882	+	0	NA	intron (NM_053105, intron 10 of 10)	Lx|LINE|L1	237803	NM_025733	66732	Mm.75060	NM_025733	ENSMUSG00000034689	4921530L21Rik	-	RIKEN cDNA 4921530L21 gene	protein-coding
unique_peak2-36637-6-8--0.60452689106201-1.03789460276074	chr3	7513370	7513834	+	0	NA	intron (NM_173181, intron 1 of 8)	ORR1D1|LTR|MaLR	10176	NM_173181	67306	Mm.332366	NM_173181	ENSMUSG00000043542	Zc2hc1a	3110050N22Rik|AI790358|AU023959|Fam164a	zinc finger, C2HC-type containing 1A	protein-coding
common_peak1-18699-12-37--1.59915152835595-2.90875693252979	chr8	121652464	121653030	+	0	NA	intron (NM_019707, intron 7 of 13)	intron (NM_019707, intron 7 of 13)	-215691	NM_024219	68196	Mm.358714	NM_024219	ENSMUSG00000031839	Hsbp1	0610007A03Rik|AA408769|Hsp25	heat shock factor binding protein 1	protein-coding
unique_peak1-844-8-2-1.42025991722641-1.65811743852845	chr11	12407904	12408419	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-43198	NM_001282993	12808	Mm.22847	NM_172496	ENSMUSG00000020173	Cobl	-	cordon-bleu WH2 repeat	protein-coding
common_peak1-7630-25-22-0.338287949288093-0.51032171069054	chr1	64338131	64339099	+	0	NA	Intergenic	Intergenic	-170652	NM_033563	93691	Mm.29466	NM_033563	ENSMUSG00000025959	Klf7	9830124P08Rik	Kruppel-like factor 7 (ubiquitous)	protein-coding
common_peak1-13265-55-78--0.099160877024401-0.323890238933426	chr19	34878416	34879937	+	0	NA	Intergenic	Intergenic	16087	NR_029783	723826		NR_029783		Mir107	Mirn107|mmu-mir-107	microRNA 107	ncRNA
unique_peak2-34233-1-7--2.62705701021674-1.80617997398389	chr13	51999813	52000186	+	0	NA	Intergenic	Intergenic	57955	NM_011817	23882	Mm.281298	NM_011817	ENSMUSG00000021453	Gadd45g	AI327420|C86281|CR6|DDIT2|OIG37	growth arrest and DNA-damage-inducible 45 gamma	protein-coding
unique_peak1-3849-7-4-0.477162735410827-1.09384600808989	chr2	5305198	5305697	+	0	NA	intron (NM_001290374, intron 2 of 9)	intron (NM_001290374, intron 2 of 9)	246625	NM_028804	74186	Mm.274715	NM_028804	ENSMUSG00000026676	Ccdc3	2310045O21Rik	coiled-coil domain containing 3	protein-coding
common_peak1-10413-18-16-0.225456309978012-0.397739447719379	chr13	98478451	98479152	+	0	NA	Intergenic	B1_Mur3|SINE|Alu	148846	NR_046157	328314	Mm.138047	NR_046157		Gm5086	B230311A21|EG328314	predicted gene 5086	ncRNA
unique_peak1-3319-13-2-2.19350952991661-3.03832868024006	chr18	81051821	81052489	+	0	NA	intron (NM_001201569, intron 8 of 29)	RLTR23|LTR|ERV1	78642	NM_001201569	50771	Mm.247138	NM_015805	ENSMUSG00000024566	Atp9b	AA934181|Atpc2b|IIb|MMR	ATPase, class II, type 9B	protein-coding
common_peak1-15253-26-18-0.679971578714877-0.959433126956265	chr4	14863661	14864845	+	0	NA	intron (NM_001243100, intron 2 of 5)	B1F|SINE|Alu	6465	NM_001243100	100038514	Mm.331495	NM_001243100		Gm11837	OTTMUSG00000004551	predicted gene 11837	protein-coding
common_peak1-16678-30-32-0.12528129013342-0.352152970649944	chr6	7692275	7693308	+	0	NA	Intergenic	Intergenic	-49609	NM_012055	27053	Mm.2942	NM_012055	ENSMUSG00000029752	Asns	-	asparagine synthetase	protein-coding
common_peak2-29961-37-41-0.133675648707058-0.363463023472118	chr6	118478822	118479911	+	0	NA	intron (NM_001081112, intron 20 of 33)	intron (NM_001081112, intron 20 of 33)	32908	NM_001081112	232339	Mm.276116	NM_001081112	ENSMUSG00000007827	Ankrd26	5730521P14Rik|BC008111|mKIAA1074	ankyrin repeat domain 26	protein-coding
common_peak2-23768-11-19--0.813234510635749-0.769930178837768	chr15	98634545	98635204	+	0	NA	3' UTR (NM_001013741, exon 2 of 2)	3' UTR (NM_001013741, exon 2 of 2)	3482	NM_001013741	13199	Mm.390810	NM_001013741	ENSMUSG00000059213	Ddn	Gm748	dendrin	protein-coding
unique_peak2-33780-8-9--0.316705676939792-1.03275496310833	chr11	119392572	119393175	+	0	NA	Intergenic	L1MB2|LINE|L1	16261	NM_008730	18164	Mm.5142	NM_008730	ENSMUSG00000025582	Nptx1	D11Bwg1004e|Np1	neuronal pentraxin 1	protein-coding
common_peak2-23297-14-8-0.729291158915332-0.771068449301682	chr15	34221588	34222100	+	0	NA	Intergenic	RMER17C-int|LTR|ERVK	-14592	NM_016762	17181	Mm.396856	NM_016762	ENSMUSG00000022324	Matn2	Crtm2|matrilin-2	matrilin 2	protein-coding
common_peak1-15425-18-13-0.505564229170747-0.625923329873571	chr4	88947796	88948680	+	0	NA	Intergenic	Lx7|LINE|L1	-7715	NM_009877	12578	Mm.4733	NM_009877	ENSMUSG00000044303	Cdkn2a	ARF-INK4a|Arf|INK4a-ARF|Ink4a/Arf|MTS1|Pctr1|p16|p16(INK4a)|p16INK4a|p19<ARF>|p19ARF	cyclin-dependent kinase inhibitor 2A	protein-coding
unique_peak1-2418-13-2-2.19350952991661-3.03832868024006	chr15	99810056	99810887	+	0	NA	intron (NM_001284521, intron 1 of 15)	intron (NM_001284521, intron 1 of 15)	-6753	NR_028124	70281	Mm.484037	NR_028124		2310068J16Rik	-	RIKEN cDNA 2310068J16 gene	ncRNA
common_peak2-23408-8-8--0.164702583494742-1.00793137938329	chr15	59481950	59482357	+	0	NA	intron (NM_144549, intron 1 of 2)	intron (NM_144549, intron 1 of 2)	1944	NM_144549	211770	Mm.40298	NM_144549	ENSMUSG00000032501	Trib1	A530090O15Rik|TRB-1|Trb1	tribbles homolog 1 (Drosophila)	protein-coding
common_peak1-10906-11-12--0.191746133889479-0.310474156842889	chr15	3582909	3583502	+	0	NA	Intergenic	Intergenic	-49853	NM_010284	14600	Mm.3986	NM_010284	ENSMUSG00000055737	Ghr	GHBP|GHR/BP	growth hormone receptor	protein-coding
common_peak2-32288-7-8--0.370834171144123-1.00793137938329	chrX	23693109	23693456	+	0	NA	Intergenic	RodERV21-int|LTR|ERV1	223393	NM_001034864	236749	Mm.296422	NM_001034864	ENSMUSG00000068113	Gm4907	EG236749	predicted gene 4907	protein-coding
common_peak1-11148-12-11-0.0638134843664826-0.337263207250336	chr15	74702378	74702880	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	9505	NM_025929	67038	Mm.154566	NM_025929	ENSMUSG00000063522	2010109I03Rik	-	RIKEN cDNA 2010109I03 gene	protein-coding
unique_peak1-5576-10-2-1.77145284428761-2.09384600808989	chr5	148928070	148928636	+	0	NA	intron (NM_029920, intron 4 of 14)	intron (NM_029920, intron 4 of 14)	159457	NM_029920	77521	Mm.244177	NM_029920	ENSMUSG00000029651	Mtus2	5730592G18Rik|A730013O20Rik|AU067634|C130038G02Rik|Cazip|Gm763|mKIAA0774	microtubule associated tumor suppressor candidate 2	protein-coding
unique_peak2-33832-7-8--0.370834171144123-1.00793137938329	chr12	8876307	8876675	+	0	NA	Intergenic	MLT1K|LTR|MaLR	-51622	NM_008640	17775	Mm.30071	NM_008640	ENSMUSG00000020585	Laptm4a	AA286466|LAPTM4|MTP|Mtrp|mKIAA0108	lysosomal-associated protein transmembrane 4A	protein-coding
common_peak2-24262-12-37--1.59915152835595-2.90875693252979	chr16	93705066	93706062	+	0	NA	Intergenic	RLTR4_MM-int|LTR|ERV1	-6588	NM_026700	70028	Mm.23230	NM_026700	ENSMUSG00000022946	Dopey2	0610038M01Rik|2610510B01Rik|AI503246|C21orf5|mKIAA0933	dopey family member 2	protein-coding
common_peak1-19157-32-79--1.0428360756677-3.30455250786927	chr9	94538135	94539283	+	0	NA	Intergenic	L1Md_A|LINE|L1	-31602	NM_177909	331004	Mm.326125	NM_177909	ENSMUSG00000031129	Slc9a9	5730527A11Rik|9930105B05|AI854429|Nhe9	solute carrier family 9 (sodium/hydrogen exchanger), member 9	protein-coding
common_peak1-9221-34-18-1.13414101355768-2.44513000105557	chr11	83877183	83878654	+	0	NA	intron (NM_019819, intron 1 of 2)	intron (NM_019819, intron 1 of 2)	3941	NM_019819	56405	Mm.240885	NM_019819	ENSMUSG00000018648	Dusp14	1110014C10Rik|2310042C07Rik|D11Ertd395e|MKP-L|Mkp6	dual specificity phosphatase 14	protein-coding
unique_peak2-33250-8-24--1.63863377182715-2.11898024768848	chr10	127288508	127289561	+	0	NA	intron (NM_147222, intron 1 of 3)	RLTR12B|LTR|ERVK	2050	NM_147222	216453	Mm.222953	NM_147222	ENSMUSG00000054052	Rdh19	RDH-S|RDH-S2|Rdhs	retinol dehydrogenase 19	protein-coding
common_peak1-8399-20-7-1.48807478459119-2.07034318903805	chr10	67785780	67786473	+	0	NA	Intergenic	Intergenic	-2236	NR_045357	75148	Mm.23505	NR_045357		4930545H06Rik	-	RIKEN cDNA 4930545H06 gene	ncRNA
common_peak1-9644-77-160--0.546390298558619-2.32330509436493	chr12	72760554	72762115	+	0	NA	Intergenic	B3A|SINE|B2	119740	NR_045941	73815	Mm.416916	NR_045941		4930404H11Rik	-	RIKEN cDNA 4930404H11 gene	ncRNA
unique_peak2-37755-7-8--0.370834171144123-1.00793137938329	chr5	113204601	113205015	+	0	NA	intron (NM_028901, intron 33 of 43)	intron (NM_028901, intron 33 of 43)	-17504	NR_040675	67360	Mm.59218	NR_040675	ENSMUSG00000098230	1700095B10Rik	-	RIKEN cDNA 1700095B10 gene	ncRNA
common_peak2-28700-17-23--0.366666162516118-0.383878263347744	chr5	34186736	34187754	+	0	NA	intron (NM_175231, intron 1 of 20)	intron (NM_175231, intron 1 of 20)	1484	NM_001081102	107823	Mm.19892	NM_175231	ENSMUSG00000057406	Whsc1	5830445G22Rik|9430010A17Rik|AW555663|C130020C13Rik|D030027O06Rik|D930023B08Rik|MMSET|NSD2|Whsc1l|mKIAA1090	Wolf-Hirschhorn syndrome candidate 1 (human)	protein-coding
common_peak2-27050-15-37--1.23576276288793-2.15838218998677	chr2	180589117	180590218	+	0	NA	Intergenic	Intergenic	-39078	NR_029538	723951		NR_029538		Mir124a-3	Mirn124a-3|mir-124a-3	microRNA 124a-3	ncRNA
common_peak1-10845-84-128--0.0762931965342286-0.332302200896337	chr14	115040808	115042363	+	0	NA	Intergenic	Intergenic	-189602	NR_045661	75822	Mm.410813	NR_045661		4930524C18Rik	-	RIKEN cDNA 4930524C18 gene	ncRNA
common_peak2-30169-61-34-1.25346631280437-4.89755851069969	chr6	149100751	149101740	+	0	NA	Intergenic	BGLII|LTR|ERVK	11210	NM_177101	320204	Mm.274099	NM_177101	ENSMUSG00000039958	Mettl20	4833442J19Rik|AI256744	methyltransferase like 20	protein-coding
common_peak2-26730-68-42-1.1436960245962-4.87163440035403	chr2	131392287	131393892	+	0	NA	Intergenic	Intergenic	-5068	NM_013460	11550	Mm.389380	NM_013460		Adra1d	Adra-1|Adra1|Adra1a|Gpcr8|Spr8|[a]1d|alpha1D-AR	adrenergic receptor, alpha 1d	protein-coding
unique_peak1-3367-67-13-2.73705656072539-15.0779656134852	chr19	61226070	61228125	+	0	NA	Intergenic	Intergenic	25115	NM_001177513	633057	Mm.426097	NM_001177513	ENSMUSG00000094649	Gm7102	EG633057	predicted gene 7102	protein-coding
common_peak2-19908-12-25--1.05166373305345-1.1381569562463	chr1	119504040	119504745	+	0	NA	Intergenic	Intergenic	703317	NM_011650	22099	Mm.426637	NM_011650	ENSMUSG00000026374	Tsn	2610034C24Rik|AU040286|C3PO|TB-RBP	translin	protein-coding
unique_peak1-5754-23-7-1.72176750450908-2.82905316394614	chr6	50390648	50391660	+	0	NA	intron (NM_001163645, intron 1 of 21)	intron (NM_001163645, intron 1 of 21)	15015	NM_001163645	71720	Mm.44153	NM_027881	ENSMUSG00000029822	Osbpl3	1200014M06Rik|6720421I08Rik|A530055M08|ORP3|OSBP3	oxysterol binding protein-like 3	protein-coding
common_peak2-28852-7-12--0.901348887842903-1.31827279259406	chr5	73256072	73256625	+	0	NA	intron (NM_013689, intron 1 of 17)	B1F1|SINE|Alu	3339	NM_001113461	21682	Mm.319581	NM_013689	ENSMUSG00000029217	Tec	-	tec protein tyrosine kinase	protein-coding
unique_peak1-3632-13-2-2.19350952991661-3.03832868024006	chr19	37858327	37858975	+	0	NA	Intergenic	L1MEf|LINE|L1	86353	NM_007811	13082	Mm.42230	NM_007811	ENSMUSG00000024987	Cyp26a1	Cyp26|P450RA|P450RAI|RAH	cytochrome P450, family 26, subfamily a, polypeptide 1	protein-coding
unique_peak1-4587-12-3-1.64877598508764-2.36932189928148	chr3	57444697	57445241	+	0	NA	Intergenic	B4A|SINE|B4	10637	NM_175095	52245	Mm.21901	NM_175095		Commd2	1190017G07Rik|AI047739|D3Ertd176e|HSPC042	COMM domain containing 2	protein-coding
unique_peak2-35214-5-7--0.704380336005853-1.01466476204226	chr16	90844547	90845086	+	0	NA	intron (NM_001199210, intron 1 of 7)	intron (NM_001199210, intron 1 of 7)	13712	NM_001199210	70967	Mm.253077	NM_027627		Eva1c	1700092M14Rik|4931408A02Rik|Fam176c	eva-1 homolog C (C. elegans)	protein-coding
common_peak2-23843-27-16-0.904083109644897-1.48160942223867	chr15	102015474	102016214	+	0	NA	intron (NM_144942, intron 8 of 14)	MIR|SINE|MIR	3630	NM_144942	246277	Mm.296382	NM_144942	ENSMUSG00000023044	Csad	Csd	cysteine sulfinic acid decarboxylase	protein-coding
unique_peak1-6445-10-5-0.771452844287613-1.33892459842472	chr7	99199499	99200246	+	0	NA	intron (NM_011807, intron 11 of 22)	intron (NM_011807, intron 11 of 22)	-11032	NM_001243046	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
common_peak1-14097-99-143-0.0494327418403389-0.327803457540959	chr2	125122574	125124242	+	0	NA	Intergenic	Intergenic	50157	NM_023595	110074	Mm.282499	NM_023595	ENSMUSG00000027203	Dut	5031412I06Rik|5133400F09Rik|D2Bwg0749e|Dutp|dUTPase	deoxyuridine triphosphatase	protein-coding
common_peak2-22439-26-30--0.0262972182284127-0.301029995663988	chr13	40859976	40861105	+	0	NA	Intergenic	RLTR31A_Mm|LTR|ERVK	-31348	NM_011547	21418	Mm.85544	NM_011547	ENSMUSG00000021359	Tfap2a	AP-2|AP2alpha|Ap2|Ap2tf|Tcfap2a	transcription factor AP-2, alpha	protein-coding
common_peak1-16449-12-8-0.478850983645327-0.562038191119709	chr5	135648992	135649551	+	0	NA	intron (NM_009745, intron 2 of 5)	B3|SINE|B2	5029	NM_009745	12054	Mm.405834	NM_009745	ENSMUSG00000029681	Bcl7b	-	B cell CLL/lymphoma 7B	protein-coding
common_peak1-15405-60-95--0.230670639100625-0.508549480054158	chr4	83485825	83487100	+	0	NA	intron (NM_001081012, intron 25 of 25)	L1MB2|LINE|L1	315013	NM_001081012	320226	Mm.180032	NM_029117	ENSMUSG00000052407	Ccdc171	4930418J05Rik|4930473A06Rik|A330015D16Rik	coiled-coil domain containing 171	protein-coding
unique_peak2-35907-3-8--1.58390809140159-1.39487600375387	chr19	5018718	5019149	+	0	NA	Intergenic	Intergenic	-5073	NM_007854	13340	Mm.4930	NM_007854	ENSMUSG00000024891	Slc29a2	Der12|Ent2|Hnp36	solute carrier family 29 (nucleoside transporters), member 2	protein-coding
common_peak2-30059-30-35--0.000249591950439054-0.304088508634279	chr6	128424569	128425166	+	0	NA	non-coding (NR_028592, exon 3 of 3)	non-coding (NR_028592, exon 3 of 3)	36092	NR_028592	791299	Mm.297516	NR_028592	ENSMUSG00000059659	Gm10069	ENSMUSG00000059659	predicted gene 10069	ncRNA
common_peak1-15452-16-11-0.533301141546906-0.58239619684445	chr4	98003576	98004376	+	0	NA	Intergenic	Intergenic	45980	NM_053157	94043	Mm.331719	NM_053157	ENSMUSG00000028563	Tm2d1	2310026L18Rik|AA990549|Bbp	TM2 domain containing 1	protein-coding
unique_peak1-4596-9-2-1.60465090568306-1.87199725847353	chr3	60346579	60347088	+	0	NA	intron (NM_001253708, intron 2 of 8)	intron (NM_001253708, intron 2 of 8)	41659	NM_001253708	56758	Mm.255723	NM_020007	ENSMUSG00000027763	Mbnl1	Mbnl|mKIAA0428	muscleblind-like 1 (Drosophila)	protein-coding
common_peak2-22526-71-144--0.535464911294963-2.03343017274133	chr13	55211514	55213296	+	0	NA	intron (NM_012017, intron 1 of 6)	intron (NM_012017, intron 1 of 6)	5735	NM_012017	26919	Mm.22795	NM_012017	ENSMUSG00000021481	Zfp346	Jaz|Znf346	zinc finger protein 346	protein-coding
unique_peak2-37119-1-6--2.43441193227435-1.56314192529759	chr4	9660400	9660799	+	0	NA	Intergenic	MMERVK10C-int|LTR|ERVK	-37133	NR_030693	320152	Mm.159946	NR_030693		4930412C18Rik	5730591J02Rik	RIKEN cDNA 4930412C18 gene	ncRNA
unique_peak2-36731-3-4--0.73591118484664-0.864171920961574	chr3	57251055	57251393	+	0	NA	Intergenic	Intergenic	21892	NM_145539	229302	Mm.26618	NM_145539	ENSMUSG00000027801	Tm4sf4	Iltmp	transmembrane 4 superfamily member 4	protein-coding
unique_peak1-2314-8-0-3.00522241794757-2.70926996097583	chr15	82022641	82023060	+	0	NA	intron (NM_033218, intron 12 of 18)	intron (NM_033218, intron 12 of 18)	-5702	NR_029804	723897		NR_029804		Mir33	Mirn33|mmu-mir-33	microRNA 33	ncRNA
unique_peak2-38641-6-25--2.13504160776079-3.01815507148775	chr7	89517174	89518136	+	0	NA	intron (NM_001190374, intron 2 of 29)	intron (NM_001190374, intron 2 of 29)	33451	NM_001190374	269959	Mm.65306	NM_001190374	ENSMUSG00000070469	Adamtsl3	9230119C12Rik|C130057K09|mKIAA1233	ADAMTS-like 3	protein-coding
unique_peak1-4675-10-4-1.03448725012141-1.5150158574804	chr3	94686424	94686866	+	0	NA	3' UTR (NM_001165948, exon 19 of 19)	3' UTR (NM_001165948, exon 19 of 19)	4235	NM_008945	19172	Mm.368	NM_008945	ENSMUSG00000005779	Psmb4	Pros-27	proteasome (prosome, macropain) subunit, beta type 4	protein-coding
common_peak1-14906-11-13--0.298661337805991-0.337263207250336	chr3	96727820	96728260	+	0	NA	intron (NM_008123, intron 1 of 1)	B3|SINE|B2	1934	NM_008123	14616	Mm.258183	NM_008123		Gja8	Aey5|Cnx50|Cx50|Lop10	gap junction protein, alpha 8	protein-coding
common_peak1-9179-131-167-0.312922436955834-1.32190315137712	chr11	78369225	78372033	+	0	NA	Intergenic	Intergenic	-6392	NM_133706	69071	Mm.29431	NM_133706	ENSMUSG00000037278	Tmem97	1810014L12Rik|AI115531|AL022956|D11Bhm182e	transmembrane protein 97	protein-coding
common_peak2-31344-88-103-0.314972691029441-0.935083268254793	chr8	84191486	84193116	+	0	NA	intron (NM_001297596, intron 2 of 24)	Lx4B|LINE|L1	325840	NM_001297593	234515	Mm.324468	NM_001024617	ENSMUSG00000037940	Inpp4b	E130107I17Rik	inositol polyphosphate-4-phosphatase, type II	protein-coding
unique_peak2-33397-9-29--1.7172771892043-2.70611768348013	chr11	51880757	51881730	+	0	NA	intron (NM_001166654, intron 13 of 13)	intron (NM_001166654, intron 13 of 13)	-31083	NM_019411	19052	Mm.260288	NM_019411		Ppp2ca	PP2A|R75353	protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform	protein-coding
common_peak2-24098-29-31-0.112290080615111-0.353704024845522	chr16	32277345	32278087	+	0	NA	5' UTR (NM_027355, exon 1 of 6)	5' UTR (NM_027355, exon 1 of 6)	169	NM_027355	70238	Mm.228263	NM_027355	ENSMUSG00000014074	Rnf168	3110001H15Rik	ring finger protein 168	protein-coding
common_peak2-26924-8-12--0.695217300193522-0.475924844171029	chr2	163552013	163552502	+	0	NA	TTS (NM_007398)	TTS (NM_007398)	23718	NM_007398	11486	Mm.388	NM_007398	ENSMUSG00000017697	Ada	-	adenosine deaminase	protein-coding
common_peak1-17027-49-15-2.00628382302518-7.40674666197761	chr6	91489108	91490596	+	0	NA	Intergenic	Intergenic	23823	NM_026309	67678	Mm.246693	NM_026309	ENSMUSG00000034192	Lsm3	1010001J12Rik|2610005D18Rik|6030401D18Rik|SMX4|USS2	LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)	protein-coding
common_peak1-7920-17-16-0.130833496954699-0.356936432242225	chr1	138928353	138928939	+	0	NA	Intergenic	Intergenic	-71621	NM_030676	26424	Mm.16794	NM_030676	ENSMUSG00000026398	Nr5a2	AU020803|D1Ertd308e|Ftf|LRH-1|UF2-H3B	nuclear receptor subfamily 5, group A, member 2	protein-coding
unique_peak2-36699-8-11--0.579740082773585-1.14218153353838	chr3	37875134	37875659	+	0	NA	intron (NR_040559, intron 2 of 3)	intron (NR_040559, intron 2 of 3)	77661	NR_040559	626410	Mm.389417	NR_040559		Gm20755	-	predicted gene, 20755	ncRNA
common_peak2-25531-10-4-1.03448725012141-1.5150158574804	chr19	5817086	5817376	+	0	NA	Intergenic	RMER17C|LTR|ERVK	-14560	NR_002847	72289	Mm.298256	NR_002847	ENSMUSG00000092341	Malat1	2210401K01Rik|9430072K23Rik|AI647968|Neat2	metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)	ncRNA
common_peak1-18107-14-11-0.314253659636488-0.435191258261915	chr8	3413259	3413983	+	0	NA	intron (NM_133962, intron 1 of 19)	intron (NM_133962, intron 1 of 19)	20613	NM_133962	102098	Mm.170461	NM_133962	ENSMUSG00000004568	Arhgef18	AI467246|D030053O22Rik	rho/rac guanine nucleotide exchange factor (GEF) 18	protein-coding
unique_peak2-32801-3-6--1.22133801201688-1.08602067057793	chr1	182983226	182983629	+	0	NA	intron (NM_001033819, intron 1 of 2)	intron (NM_001033819, intron 1 of 2)	2059	NM_001033819	619326	Mm.355174	NM_001033819	ENSMUSG00000038768	9130409I23Rik	-	RIKEN cDNA 9130409I23 gene	protein-coding
unique_peak2-33276-1-9--2.94898510510411-2.31132995230379	chr10	130412208	130412609	+	0	NA	Intergenic	Intergenic	-477973	NM_001103366	625131	Mm.469844	NM_001103366	ENSMUSG00000091511	Vmn2r87	EG625131	vomeronasal 2, receptor 87	protein-coding
unique_peak1-4184-11-6-0.701338662194009-1.32595962126035	chr2	115772378	115773109	+	0	NA	intron (NM_010825, intron 8 of 11)	B3|SINE|B2	117614	NM_001159569	17536	Mm.247566	NM_010825	ENSMUSG00000027210	Meis2	A430109D20Rik|Mrg1|Stra10	Meis homeobox 2	protein-coding
common_peak2-28094-16-15-0.118263642268062-0.328191099940264	chr4	86689524	86690068	+	0	NA	intron (NM_001110240, intron 4 of 9)	intron (NM_001110240, intron 4 of 9)	169478	NM_139306	230379	Mm.45019	NM_139306	ENSMUSG00000038007	Acer2	2410116I05Rik|Asah3l|CRG-L1|maCER2	alkaline ceramidase 2	protein-coding
common_peak2-20897-13-22--0.745089925419244-0.690311289528838	chr11	4259937	4260866	+	0	NA	intron (NM_029458, intron 10 of 10)	Lx7|LINE|L1	80684	NM_029458	75828	Mm.159592	NM_029458	ENSMUSG00000020419	Hormad2	4930529M09Rik	HORMA domain containing 2	protein-coding
common_peak1-19421-23-30--0.232428805877794-0.363124929330844	chrX	74328480	74329442	+	0	NA	Intergenic	Intergenic	-427605	NM_020601	21372	Mm.258476	NM_020601	ENSMUSG00000025246	Tbl1x	5330429M20|Tbl1	transducin (beta)-like 1 X-linked	protein-coding
common_peak1-8406-7-11--0.785871670422967-1.21681515183528	chr10	69352377	69352856	+	0	NA	intron (NM_170728, intron 16 of 40)	intron (NM_170728, intron 16 of 40)	-35664	NM_170687	11735	Mm.235960	NM_009670	ENSMUSG00000069601	Ank3	2900054D09Rik|AI314020|Ank-3|AnkG|Ankyrin-3|Ankyrin-G	ankyrin 3, epithelial	protein-coding
unique_peak1-2355-12-6-0.841421063030034-1.58711810488664	chr15	85985317	85986025	+	0	NA	intron (NM_145475, intron 5 of 12)	intron (NM_145475, intron 5 of 12)	30900	NM_145475	223753	Mm.222685	NM_145475	ENSMUSG00000035891	Cerk	AI848610|D330016D08Rik|mKIAA1646	ceramide kinase	protein-coding
common_peak2-28574-10-25--1.34402437313232-1.74319850844462	chr5	8735802	8736733	+	0	NA	intron (NM_011076, intron 23 of 27)	intron (NM_011076, intron 23 of 27)	-61880	NM_011075	18669	Mm.146649	NM_011075	ENSMUSG00000028970	Abcb1b	Abcb1|Mdr1|Mdr1b|Pgy-1|Pgy1|mdr	ATP-binding cassette, sub-family B (MDR/TAP), member 1B	protein-coding
common_peak2-31880-11-12--0.191746133889479-0.310474156842889	chr9	55512399	55512879	+	0	NA	intron (NM_001081341, intron 25 of 32)	intron (NM_001081341, intron 25 of 32)	123683	NM_027397	104360	Mm.273996	NM_027397	ENSMUSG00000032318	Isl2	3110001N10Rik	insulin related protein 2 (islet 2)	protein-coding
common_peak2-24394-14-15--0.100783839642355-0.301029995663982	chr17	13699681	13700394	+	0	NA	intron (NR_045437, intron 2 of 3)	intron (NR_045437, intron 2 of 3)	-14285	NR_030763	272667	Mm.444718	NR_030763	ENSMUSG00000079711	Smok4a	4930513D10Rik|Smok2c	sperm motility kinase 4A	pseudo
unique_peak1-1655-8-4-0.683294323060208-1.21878474469819	chr13	60020295	60020807	+	0	NA	Intergenic	Intergenic	-96043	NM_153538	214290	Mm.233082	NM_153538	ENSMUSG00000035248	Zcchc6	6030448M23Rik|AA420405	zinc finger, CCHC domain containing 6	protein-coding
unique_peak2-39123-1-5--2.2120195109379-1.32905871926422	chr8	83653478	83653799	+	0	NA	Intergenic	L1_Mus2|LINE|L1	-114833	NM_027554	74841	Mm.246018	NM_027554	ENSMUSG00000038250	Usp38	4631402N15Rik|4833420O05Rik|AA536967|AU044701|AW544820|mKIAA1891	ubiquitin specific peptidase 38	protein-coding
common_peak2-19865-62-70-0.261004339297402-0.61673759389873	chr1	92786759	92788036	+	0	NA	Intergenic	ETnERV2-int|LTR|ERVK	-24280	NM_053015	171531	Mm.105208	NM_053015	ENSMUSG00000026303	Mlph	2210418F23Rik|5031433I09Rik|AW228792|D1Wsu84e|Slac-2a|l(1)-3Rk|l1Rk3|ln	melanophilin	protein-coding
common_peak2-22131-8-5-0.420259917226415-1.10484139239135	chr12	85192457	85192958	+	0	NA	intron (NR_073563, intron 3 of 10)	B1_Mur2|SINE|Alu	-9399	NM_010949	18222	Mm.4390	NM_010949	ENSMUSG00000021224	Numb	Nb	numb gene homolog (Drosophila)	protein-coding
unique_peak1-4167-9-9--0.132314688483142-1.03275496310833	chr2	109415208	109415702	+	0	NA	Intergenic	Intergenic	-99402	NM_007540	12064	Mm.1442	NM_007540	ENSMUSG00000048482	Bdnf	-	brain derived neurotrophic factor	protein-coding
unique_peak1-5944-10-1-2.35641534500877-2.57096726280955	chr6	90998914	90999443	+	0	NA	intron (NM_018815, intron 20 of 39)	intron (NM_018815, intron 20 of 39)	67642	NM_018815	54563	Mm.28162	NM_018815	ENSMUSG00000030091	Nup210	9830001L10|AI836801|Pom210|gp190|gp210	nucleoporin 210	protein-coding
common_peak2-30143-26-19-0.6059709972711-0.841847921495509	chr6	145340070	145340831	+	0	NA	non-coding (NR_003625, exon 1 of 1)	non-coding (NR_003625, exon 1 of 1)	4305	NR_003625	381827	Mm.179075	NM_001001987		1700073E17Rik	-	ribosomal protein L7 pseudogene	pseudo
unique_peak1-5166-24-15-0.793209902767717-1.16796998271032	chr5	25705142	25706401	+	0	NA	Intergenic	Intergenic	439927	NM_001004365	242894	Mm.150319	NM_001004365	ENSMUSG00000056367	Actr3b	9630005C02|ARP11|AW047569|Arp3b|Arp3beta	ARP3 actin-related protein 3B	protein-coding
unique_peak2-36211-6-10--0.894033508256995-1.21398586181642	chr2	33206255	33206884	+	0	NA	intron (NM_001290570, intron 1 of 16)	RMER1A|Other|Other	20445	NM_001290570	241308	Mm.274249	NM_175211	ENSMUSG00000038831	Ralgps1	5830418G11Rik|AI853783|AI854138|RALGEF2|RALGPS1A|RalGEF 2|mKIAA0351	Ral GEF with PH domain and SH3 binding motif 1	protein-coding
common_peak2-21578-44-37-0.57396532112495-1.23216191351736	chr11	97781680	97782478	+	0	NA	Intergenic	Intergenic	-36611	NM_001081435	72973	Mm.245939	NM_001081435		Fbxo47	2900052P03Rik|Gm1562	F-box protein 47	protein-coding
common_peak1-7859-34-19-1.0601404321139-2.23152841032562	chr1	133056370	133057899	+	0	NA	exon (NM_010709, exon 6 of 15)	exon (NM_010709, exon 6 of 15)	7350	NM_010709	16865	Mm.276294	NM_010709	ENSMUSG00000026427	Eif2d	D1Ertd5e|Lgtn	eukaryotic translation initiation factor 2D	protein-coding
unique_peak1-3876-16-8-0.948338640825749-1.02063122982878	chr2	13370130	13370891	+	0	NA	intron (NM_001081084, intron 17 of 66)	intron (NM_001081084, intron 17 of 66)	42993	NM_001081084	65969	Mm.313915	NM_001081084	ENSMUSG00000026726	Cubn	AA408369|AL022750|D2Wsu88e	cubilin (intrinsic factor-cobalamin receptor)	protein-coding
common_peak2-21767-13-31--1.22152796936223-1.73082168901047	chr11	116434135	116435036	+	0	NA	intron (NM_173755, intron 1 of 17)	intron (NM_173755, intron 1 of 17)	8176	NM_173755	217342	Mm.243950	NM_173755	ENSMUSG00000020802	Ube2o	9630022H21|B230113M03Rik|E2-230K|mKIAA1734	ubiquitin-conjugating enzyme E2O	protein-coding
common_peak2-23095-14-21--0.560215458279653-0.519193887192484	chr14	76664363	76665305	+	0	NA	Intergenic	Intergenic	-150794	NM_207652	21807	Mm.153272	NM_009366	ENSMUSG00000022010	Tsc22d1	AA589566|AW105905|Egr5|TSC-22|Tgfb1i4|Tsc|Tsc22	TSC22 domain family, member 1	protein-coding
unique_peak2-34246-6-7--0.434601889619698-0.97990265578305	chr13	55634948	55635348	+	0	NA	intron (NM_134059, intron 9 of 16)	intron (NM_134059, intron 9 of 16)	2871	NM_134059	72935	Mm.205045	NM_134059	ENSMUSG00000021494	Ddx41	2900024F02Rik|AA958953|ABS|AI324246	DEAD (Asp-Glu-Ala-Asp) box polypeptide 41	protein-coding
unique_peak2-39827-4-10--1.48289213249054-1.5150158574804	chrX	48208230	48208622	+	0	NA	intron (NM_133729, intron 2 of 11)	intron (NM_133729, intron 2 of 11)	13813	NM_133729	70415	Mm.391246	NM_133729		2610018G03Rik	Mst4	RIKEN cDNA 2610018G03 gene	protein-coding
common_peak2-31038-53-85--0.285291742286169-0.57422342071824	chr8	13785172	13786211	+	0	NA	promoter-TSS (NM_025924)	promoter-TSS (NM_025924)	76	NM_025924	67031	Mm.44858	NM_025924	ENSMUSG00000038398	Upf3a	2600001C03Rik|4930546M19Rik|RENT3A|UPF3	UPF3 regulator of nonsense transcripts homolog A (yeast)	protein-coding
common_peak2-30252-27-20-0.599228528116475-0.90781512069806	chr7	12478168	12479046	+	0	NA	Intergenic	L1Md_F2|LINE|L1	12915	NM_134207	171241	Mm.377197	NM_134207	ENSMUSG00000043308	Vmn1r75	V1rg6	vomeronasal 1 receptor 75	protein-coding
common_peak2-23830-8-19--1.31670567693979-1.30305656033811	chr15	101368700	101369525	+	0	NA	intron (NM_016879, intron 2 of 3)	intron (NM_016879, intron 2 of 3)	-5861	NM_008474	16680	Mm.25292	NM_008474	ENSMUSG00000044294	Krt84	AV235125|HRb-1|Krt2-16|Krt2-3	keratin 84	protein-coding
common_peak1-14499-32-57--0.578888975907912-1.03825765497309	chr3	14610654	14611797	+	0	NA	promoter-TSS (NM_001099674)	promoter-TSS (NM_001099674)	31	NM_001099674	69126	Mm.389020	NM_001099674	ENSMUSG00000078784	1810022K09Rik	AI746582|AL023036	RIKEN cDNA 1810022K09 gene	protein-coding
common_peak2-19974-37-27-0.718638149428215-1.38733277998641	chr1	133225804	133226969	+	0	NA	intron (NM_001081011, intron 13 of 22)	B2_Mm2|SINE|B2	-50246	NM_019777	56489	Mm.386783	NM_019777	ENSMUSG00000042349	Ikbke	AW558201|IKK-i|IKKepsilon|Ikki	inhibitor of kappaB kinase epsilon	protein-coding
common_peak1-14152-12-17--0.521149016354673-0.417187467413082	chr2	132263211	132263776	+	0	NA	intron (NR_045802, intron 1 of 3)	intron (NR_045802, intron 1 of 3)	13016	NR_045802	70845	Mm.158461	NR_045802	ENSMUSG00000027345	4921508D12Rik	-	RIKEN cDNA 4921508D12 gene	ncRNA
common_peak1-18284-15-39--1.30976334433171-2.45517123152778	chr8	41239630	41240308	+	0	NA	Intergenic	Lx|LINE|L1	132338	NM_030610	80857	Mm.425526	NM_030610	ENSMUSG00000031603	Fgf20	-	fibroblast growth factor 20	protein-coding
common_peak1-8845-43-59--0.124327410084816-0.331513058069911	chr11	29692692	29694158	+	0	NA	intron (NM_146016, intron 22 of 41)	intron (NM_146016, intron 22 of 41)	32243	NM_176829	216622	Mm.443260	NM_176829	ENSMUSG00000078157	4931440F15Rik	Fem1ab	RIKEN cDNA 4931440F15 gene	protein-coding
unique_peak1-304-9-0-3.18961340640422-3.01029995663981	chr1	127625539	127625954	+	0	NA	intron (NM_027677, intron 1 of 1)	RMER17C|LTR|ERVK	52173	NM_027677	71111	Mm.32727	NM_027677	ENSMUSG00000026343	Gpr39	4933415E13Rik	G protein-coupled receptor 39	protein-coding
common_peak1-11389-15-7-1.01216475055566-1.08658567012551	chr15	97814630	97815401	+	0	NA	intron (NM_001113515, intron 32 of 52)	intron (NM_001113515, intron 32 of 52)	20140	NM_031163	12824	Mm.2423	NM_031163	ENSMUSG00000022483	Col2a1	Col2|Col2a|Col2a-1|Del1|Dmm|Lpk|M100856|Rgsc856	collagen, type II, alpha 1	protein-coding
unique_peak1-2028-38-10-2.11202104066123-6.18152551155272	chr15	10890278	10891457	+	0	NA	intron (NM_030888, intron 3 of 5)	intron (NM_030888, intron 3 of 5)	8755	NM_001204134	81799	Mm.280158	NM_030888	ENSMUSG00000058914	C1qtnf3	2310005P21Rik|CORS-26|CORS26|CTRP3|Corcs|Cors	C1q and tumor necrosis factor related protein 3	protein-coding
common_peak2-23856-21-22-0.0459273092092225-0.319918318021793	chr15	102243133	102243840	+	0	NA	intron (NM_013672, intron 3 of 5)	B1_Mus1|SINE|Alu	6739	NM_013672	20683	Mm.4618	NM_013672	ENSMUSG00000001280	Sp1	1110003E12Rik|AA450830|AI845540|Sp1-1	trans-acting transcription factor 1	protein-coding
unique_peak1-771-17-6-1.41094141614743-1.84350559086818	chr10	127165049	127165783	+	0	NA	intron (NM_009312, intron 3 of 6)	intron (NM_009312, intron 3 of 6)	2968	NM_009312	21334	Mm.2374	NM_009312	ENSMUSG00000025400	Tac2	Tac3	tachykinin 2	protein-coding
common_peak1-19304-7-10--0.660340788339108-1.12966497611638	chr9	121815532	121816053	+	0	NA	intron (NM_001276719, intron 3 of 3)	intron (NM_001276719, intron 3 of 3)	8319	NM_021609	59289	Mm.258105	NM_021609	ENSMUSG00000044534	Ackr2	AI464239|CCR10|CCR9|Ccbp2|Cmkbr9|D6	atypical chemokine receptor 2	protein-coding
unique_peak1-4411-21-3-2.56948926526624-4.33845181153635	chr2	167585941	167586796	+	0	NA	Intergenic	Intergenic	69691	NR_015500	329562	Mm.123101	NM_177851	ENSMUSG00000006462	A530013C23Rik	-	RIKEN cDNA A530013C23 gene	ncRNA
common_peak2-24896-57-65-0.221638920720475-0.521498497621986	chr17	84074713	84076273	+	0	NA	Intergenic	RLTR14|LTR|ERV1	-30010	NM_001171054	116871	Mm.277668	NM_054082	ENSMUSG00000055817	Mta3	1110002J22Rik|mKIAA1266	metastasis associated 3	protein-coding
unique_peak2-32928-2-10--2.37688587490062-2.09384600808989	chr10	26015792	26016232	+	0	NA	intron (NM_172787, intron 17 of 21)	intron (NM_172787, intron 17 of 21)	66499	NM_001115154	268288	Mm.213322	NM_001013766	ENSMUSG00000051354	Samd3	Gm623	sterile alpha motif domain containing 3	protein-coding
unique_peak1-7340-10-3-1.35641534500877-1.75805390616669	chrX	56606612	56607072	+	0	NA	intron (NM_001290414, intron 2 of 6)	L1_Mur2|LINE|L1	-187577	NM_001290415	14168	Mm.7995	NM_010200	ENSMUSG00000031137	Fgf13	Fhf2	fibroblast growth factor 13	protein-coding
common_peak2-21242-11-10-0.0492619656143161-0.31137425193576	chr11	68458302	68458784	+	0	NA	Intergenic	Intergenic	-46874	NM_175260	77579	Mm.218233	NM_175260	ENSMUSG00000020900	Myh10	5730504C04Rik|9330167F11Rik|Fltn|Myhn-2|Myhn2|NMHC II-B|NMHC-B|NMHCII-B|NMMHC II-b|NMMHC-B|NMMHC-IIB|SMemb|mKIAA3005	myosin, heavy polypeptide 10, non-muscle	protein-coding
common_peak1-14204-19-12-0.702247608520594-0.840839978588874	chr2	148855750	148856423	+	0	NA	Intergenic	RMER16|LTR|ERVK	-154882	NM_009976	13010	Mm.4263	NM_009976	ENSMUSG00000027447	Cst3	CysC	cystatin C	protein-coding
common_peak1-18813-22-21-0.187852486450107-0.376654945067947	chr9	99139493	99140372	+	0	NA	Intergenic	RMER6A|LTR|ERVK	-2274	NM_001244762	623459	Mm.260891	NM_001244762	ENSMUSG00000096316	Gm6432	EG623459	predicted gene 6432	protein-coding
unique_peak2-34671-2-7--1.91745425626332-1.45399745587252	chr15	5446730	5447168	+	0	NA	intron (NR_045274, intron 1 of 4)	Lx4B|LINE|L1	631	NR_045274	71432	Mm.291087	NR_045274		5430437J10Rik	-	RIKEN cDNA 5430437J10 gene	ncRNA
common_peak1-17147-38-31-0.57145265929853-1.10165134406427	chr6	117840935	117842045	+	0	NA	Intergenic	Intergenic	-8868	NM_001166432	98758	Mm.422979	NM_133834	ENSMUSG00000042079	Hnrnpf	4833420I20Rik|AA407306|Hnrpf	heterogeneous nuclear ribonucleoprotein F	protein-coding
common_peak2-28695-39-53--0.139126255244315-0.335101043913478	chr5	33820492	33821833	+	0	NA	Intergenic	ORR1E-int|LTR|MaLR	-44423	NM_011320	672284		NM_011320		Nkx1-1	Nkx-1.1|Sax2	NK1 transcription factor related, locus 1 (Drosophila)	protein-coding
common_peak1-17104-18-20--0.0793982715504091-0.301029995663976	chr6	113530962	113531761	+	0	NA	intron (NM_001033244, intron 34 of 43)	intron (NM_001033244, intron 34 of 43)	19348	NM_027633	70979	Mm.72959	NM_027633	ENSMUSG00000033963	Fancd2os	4931417G12Rik	Fancd2 opposite strand	protein-coding
common_peak1-11975-12-40--1.70877601953045-3.43266191012052	chr17	6960934	6961631	+	0	NA	intron (NM_009510, intron 2 of 12)	intron (NM_009510, intron 2 of 12)	25847	NM_009510	22350	Mm.277812	NM_009510	ENSMUSG00000052397	Ezr	AW146364|R75297|Vil2|p81	ezrin	protein-coding
common_peak1-11201-15-20--0.380152672223105-0.397739447719386	chr15	77888623	77889212	+	0	NA	intron (NM_007583, intron 1 of 3)	L2b|LINE|L2	60793	NM_007583	12300	Mm.277338	NM_007583		Cacng2	AW060990|B230105C07Rik|B930041E13Rik|stargazer|stargazin|stg|wag|waggler	calcium channel, voltage-dependent, gamma subunit 2	protein-coding
unique_peak2-35577-7-6--0.00826409175941478-0.97990265578305	chr17	71088785	71089169	+	0	NA	intron (NM_001128181, intron 5 of 9)	intron (NM_001128181, intron 5 of 9)	107140	NM_001164077	21815	Mm.101034	NM_009372	ENSMUSG00000047407	Tgif1	AA959811|AI462167|Tgif	TGFB-induced factor homeobox 1	protein-coding
common_peak1-12053-35-66--0.634718931995268-1.36285458319551	chr17	22360941	22362013	+	0	NA	intron (NM_001205095, intron 1 of 4)	intron (NM_001205095, intron 1 of 4)	1104	NM_001205095	240038	Mm.227945	NM_001205095	ENSMUSG00000096433	Gm4944	EG240038	predicted gene 4944	protein-coding
unique_peak2-37255-8-11--0.579740082773585-1.14218153353838	chr4	105157685	105158230	+	0	NA	Intergenic	L1_Rod|LINE|L1	328005	NM_080555	67916	Mm.348326	NM_080555	ENSMUSG00000028517	Ppap2b	1110003O22Rik|2610002D05Rik|AV025606|D4Bwg0538e|D4Bwg1535e|Lpp3|Ppab2b	phosphatidic acid phosphatase type 2B	protein-coding
unique_peak1-890-9-6-0.382258484346616-1.11707584880836	chr11	33163297	33163852	+	0	NA	intron (NR_110973, intron 25 of 28)	MTD|LTR|MaLR	-59986	NM_019916	27140	Mm.25362	NM_019916	ENSMUSG00000040610	Tlx3	Hox11l2|Rnx|Tlx1l2	T cell leukemia, homeobox 3	protein-coding
common_peak1-9648-22-13-0.8399291830298-1.1381569562463	chr12	79936741	79937791	+	0	NA	intron (NM_019579, intron 14 of 14)	B1_Mur4|SINE|Alu	25359	NM_023721	73834	Mm.491124	NM_023721	ENSMUSG00000021114	Atp6v1d	1110004P10Rik|Atp6m|VATD|Vma8	ATPase, H+ transporting, lysosomal V1 subunit D	protein-coding
common_peak2-21541-10-14--0.550475250599749-0.446472590016315	chr11	95835697	95836448	+	0	NA	intron (NM_009951, intron 5 of 14)	intron (NM_009951, intron 5 of 14)	-11375	NR_037223	100526468		NR_037223	miRBase:MI0014025	Mir3063	mmu-mir-3063	microRNA 3063	ncRNA
unique_peak2-34190-7-10--0.660340788339108-1.12966497611638	chr13	37452015	37452485	+	0	NA	intron (NM_010745, intron 1 of 4)	intron (NM_010745, intron 1 of 4)	15036	NM_010745	17084	Mm.2639	NM_010745	ENSMUSG00000021423	Ly86	MD-1|MD1	lymphocyte antigen 86	protein-coding
common_peak1-17208-10-7-0.356415345008769-1.12966497611638	chr6	125319112	125319733	+	0	NA	intron (NM_198604, intron 14 of 16)	(CA)n|Simple_repeat|Simple_repeat	11100	NM_198604	213522	Mm.333396	NM_198604	ENSMUSG00000038167	Plekhg6	BC026778|Gm155	pleckstrin homology domain containing, family G (with RhoGef domain) member 6	protein-coding
common_peak2-32182-10-29--1.55047525059975-2.39922209159552	chr9	114688795	114689383	+	0	NA	intron (NM_001252479, intron 1 of 3)	intron (NM_001252479, intron 1 of 3)	2022	NM_133978	102545	Mm.35600	NM_133978	ENSMUSG00000032436	Cmtm7	AI481279|Cklfsf7|LNV	CKLF-like MARVEL transmembrane domain containing 7	protein-coding
unique_peak2-32686-6-20--1.82691931239846-2.0280102512677	chr1	138571507	138572255	+	0	NA	Intergenic	Intergenic	-8092	NR_045324	100503460	Mm.30630	NR_045324	ENSMUSG00000097113	Gm19705	-	predicted gene, 19705	ncRNA
unique_peak2-39835-10-15--0.643584654991231-0.519648556297791	chrX	49287603	49288244	+	0	NA	Intergenic	RLTRETN_Mm|LTR|ERVK	38026	NM_028851	74279	Mm.159154	NM_028851	ENSMUSG00000031118	1700080O16Rik	-	RIKEN cDNA 1700080O16 gene	protein-coding
common_peak1-12840-39-71--0.554163754523159-1.18183063007831	chr18	70568255	70569225	+	0	NA	Intergenic	Intergenic	-63368	NM_029019	170461	Mm.83623	NM_029019	ENSMUSG00000079608	Stard6	1700011K09Rik|4833424I06Rik|4933429L05Rik|AI644424	StAR-related lipid transfer (START) domain containing 6	protein-coding
unique_peak2-38593-10-11--0.228547155712387-0.31137425193576	chr7	73696561	73697088	+	0	NA	Intergenic	MYSERV-int|LTR|ERVK	-124461	NM_053080	56847	Mm.140988	NM_053080	ENSMUSG00000015134	Aldh1a3	ALDH6|RALDH3|V1	aldehyde dehydrogenase family 1, subfamily A3	protein-coding
common_peak1-18718-56-63-0.235595825439243-0.527904843875901	chr8	123042519	123043430	+	0	NA	intron (NM_198671, intron 1 of 15)	intron (NM_198671, intron 1 of 15)	-16783	NM_001145897	382034	Mm.334856	NM_198671	ENSMUSG00000031822	Gse1	2210013I18Rik|mKIAA0182	genetic suppressor element 1	protein-coding
common_peak2-26175-19-15-0.402687326661686-0.519193887192487	chr2	21235376	21236015	+	0	NA	Intergenic	MLT2B1|LTR|ERVL	-53499	NM_001004761	241263	Mm.166647	NM_175706	ENSMUSG00000045967	Gpr158	5330427M13Rik|mKIAA1136	G protein-coupled receptor 158	protein-coding
unique_peak1-367-7-0-2.79909083029819-2.40823996531185	chr1	141480110	141480576	+	0	NA	Intergenic	L1_Mur1|LINE|L1	-23544	NM_015780	50702	Mm.220362	NM_015780	ENSMUSG00000057037	Cfhr1	AI194696|CFHRB|Cfhl1	complement factor H-related 1	protein-coding
common_peak1-13601-23-18-0.473839991065495-0.618644178587689	chr2	18765374	18766404	+	0	NA	3' UTR (NM_008845, exon 10 of 10)	3' UTR (NM_008845, exon 10 of 10)	145240	NM_001001334	381350	Mm.330024	NM_001001334		BC061194	-	cDNA sequence BC061194	protein-coding
common_peak1-10963-36-37-0.231393572724169-0.470780655014941	chr15	27594947	27596705	+	0	NA	intron (NM_001242423, intron 1 of 7)	intron (NM_001242423, intron 1 of 7)	15471	NM_001242424	223433	Mm.266485	NM_198301	ENSMUSG00000056069	Fam105a	9830126M18	family with sequence similarity 105, member A	protein-coding
common_peak2-25812-70-65-0.575572797016945-1.76186337069789	chr19	38025213	38026758	+	0	NA	exon (NM_001099634, exon 24 of 53)	exon (NM_001099634, exon 24 of 53)	92082	NM_001099634	226101	Mm.34674	NM_177035	ENSMUSG00000048612	Myof	2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3	myoferlin	protein-coding
common_peak1-13758-62-69-0.281468441857118-0.662654265687252	chr2	34753182	34754737	+	0	NA	intron (NM_028716, intron 12 of 14)	MIRc|SINE|MIR	15537	NM_028716	74016	Mm.65691	NM_028716	ENSMUSG00000026873	Phf19	3110009G19Rik|3321402G02Rik	PHD finger protein 19	protein-coding
unique_peak1-7196-9-0-3.18961340640422-3.01029995663981	chr9	64088761	64089273	+	0	NA	intron (NM_008927, intron 1 of 10)	intron (NM_008927, intron 1 of 10)	6009	NM_033607	93841	Mm.390180	NM_033607	ENSMUSG00000035337	Uchl4	-	ubiquitin carboxyl-terminal esterase L4	protein-coding
common_peak1-13750-61-37-1.13482181630576-4.22982540731974	chr2	32961074	32962848	+	0	NA	Intergenic	ORR1B1-int|LTR|MaLR	-19237	NM_178888	99326	Mm.41290	NM_178888	ENSMUSG00000038860	Garnl3	AW120551	GTPase activating RANGAP domain-like 3	protein-coding
common_peak1-17580-8-10--0.454209200689727-1.078512453669	chr7	38271296	38271760	+	0	NA	intron (NM_172385, intron 5 of 5)	intron (NM_172385, intron 5 of 5)	283243	NM_172385	243937	Mm.322505	NM_172385	ENSMUSG00000043456	Zfp536	9630010P11Rik|Znf536|mKIAA0390	zinc finger protein 536	protein-coding
unique_peak1-5554-20-6-1.68071986253359-2.41165147706372	chr5	144320260	144321132	+	0	NA	intron (NM_026050, intron 2 of 2)	B1F2|SINE|Alu	11122	NM_026050	67238	Mm.383219	NM_026050	ENSMUSG00000048910	Fam220a	1500026F15Rik|2810453I06Rik|AW047776|Acpin1|Sipar	family with sequence similarity 220, member A	protein-coding
unique_peak2-33797-8-15--0.994777582052429-0.771068449301683	chr11	120316247	120316994	+	0	NA	Intergenic	RMER15|LTR|ERVL	-1823	NM_012065	18588	Mm.39200	NM_012065	ENSMUSG00000025386	Pde6g	Pdeg|p3AT	phosphodiesterase 6G, cGMP-specific, rod, gamma	protein-coding
common_peak1-16112-60-60-0.423554524057645-1.04415539603865	chr5	65696740	65698326	+	0	NA	intron (NM_011258, intron 4 of 24)	intron (NM_011258, intron 4 of 24)	29345	NM_011258	19687	Mm.148877	NM_011258	ENSMUSG00000029191	Rfc1	140kDa|Alp145|RFC140|Recc1	replication factor C (activator 1) 1	protein-coding
common_peak1-8872-29-34--0.0169929363298555-0.304177167304369	chr11	40694275	40695239	+	0	NA	Intergenic	(TA)n|Simple_repeat|Simple_repeat	-125969	NM_009831	12450	Mm.2103	NM_009831	ENSMUSG00000020326	Ccng1	AI314029	cyclin G1	protein-coding
unique_peak2-33203-1-6--2.43441193227435-1.56314192529759	chr10	111620908	111621176	+	0	NA	intron (NM_178278, intron 7 of 16)	intron (NM_178278, intron 7 of 16)	18310	NM_178278	353025	Mm.194428	NM_178278	ENSMUSG00000035694	Caps2	D630005B03Rik	calcyphosphine 2	protein-coding
common_peak1-8632-26-7-1.92789909215846-3.64499996644214	chr10	120637369	120638689	+	0	NA	Intergenic	Intergenic	110216	NM_029057	74694	Mm.233833	NM_029057	ENSMUSG00000052302	Tbc1d30	4930505D03Rik	TBC1 domain family, member 30	protein-coding
unique_peak2-32504-3-10--1.87341470859657-1.75805390616669	chr1	51288446	51288976	+	0	NA	intron (NR_045151, intron 4 of 4)	intron (NR_045151, intron 4 of 4)	-57259	NM_138741	20324	Mm.398690	NM_138741	ENSMUSG00000045954	Sdpr	-	serum deprivation response	protein-coding
common_peak1-11460-93-116-0.240705143922864-0.71532554654411	chr15	101379527	101382066	+	0	NA	exon (NM_053249, exon 1 of 9)	exon (NM_053249, exon 1 of 9)	294	NM_053249	114566	Mm.458432	NM_053249	ENSMUSG00000049548	Krt82	Krt2-20	keratin 82	protein-coding
unique_peak2-34448-8-9--0.316705676939792-1.03275496310833	chr14	22746168	22746768	+	0	NA	Intergenic	URR1A|DNA|MER1_type	62355	NM_145459	218820	Mm.292401	NM_145459	ENSMUSG00000039081	Zfp503	AI181838|B830002A16Rik|Nolz-1|Nolz1|Znf503	zinc finger protein 503	protein-coding
unique_peak2-33012-1-7--2.62705701021674-1.80617997398389	chr10	63386671	63386919	+	0	NA	intron (NM_001164519, intron 2 of 12)	intron (NM_001164519, intron 2 of 12)	102992	NM_001164519	216033	Mm.444692	NM_177612	ENSMUSG00000060843	Ctnna3	4930429L08Rik|4933408A16|Catna3|Vr22	catenin (cadherin associated protein), alpha 3	protein-coding
common_peak2-23981-10-9-0.0344872501214071-1.05503135781948	chr16	17928839	17929421	+	0	NA	promoter-TSS (NM_153150)	promoter-TSS (NM_153150)	-818	NM_153150	13358	Mm.229291	NM_153150	ENSMUSG00000003528	Slc25a1	1300019P08Rik|2610100G11Rik|AI194714|Ctp|Dgsj|Slc20a3	solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1	protein-coding
common_peak1-10964-15-22--0.511397205501357-0.50761186003982	chr15	27596998	27597755	+	0	NA	intron (NM_001242423, intron 1 of 7)	L1MA5A|LINE|L1	13921	NM_001242424	223433	Mm.266485	NM_198301	ENSMUSG00000056069	Fam105a	9830126M18	family with sequence similarity 105, member A	protein-coding
unique_peak1-6663-6-5--0.0195643903408542-0.947717972411649	chr8	18617644	18618112	+	0	NA	intron (NM_173189, intron 3 of 13)	B1F|SINE|Alu	22705	NM_173189	244329	Mm.235296	NM_173189	ENSMUSG00000039842	Mcph1	5430437K10Rik|BRIT1|D030046N04Rik|MCT	microcephaly, primary autosomal recessive 1	protein-coding
common_peak2-28800-47-56-0.101951410601806-0.347443112052874	chr5	64805478	64807015	+	0	NA	Intergenic	Intergenic	52935	NR_040681	69999	Mm.261413	NR_040681		1700027F09Rik	-	RIKEN cDNA 1700027F09 gene	ncRNA
common_peak1-14979-35-61--0.522826051924371-0.980945783223878	chr3	107332353	107333196	+	0	NA	Intergenic	Intergenic	-11838	NM_172271	229706	Mm.212867	NM_172271	ENSMUSG00000027894	Slc6a17	D130012J15Rik|Ntt4	solute carrier family 6 (neurotransmitter transporter), member 17	protein-coding
common_peak1-10231-23-9-1.39983940962172-2.17218792383888	chr13	51964487	51965368	+	0	NA	Intergenic	Intergenic	22883	NM_011817	23882	Mm.281298	NM_011817	ENSMUSG00000021453	Gadd45g	AI327420|C86281|CR6|DDIT2|OIG37	growth arrest and DNA-damage-inducible 45 gamma	protein-coding
common_peak2-25262-15-13-0.204809828498052-0.368541233333383	chr18	67311710	67312243	+	0	NA	intron (NM_010307, intron 4 of 11)	intron (NM_010307, intron 4 of 11)	18762	NM_010307	14680	Mm.440746	NM_010307	ENSMUSG00000024524	Gnal	2610011C15Rik|9630020G10Rik|Galphaolf|Gna10|Golf	guanine nucleotide binding protein, alpha stimulating, olfactory type	protein-coding
common_peak2-31628-7-8--0.370834171144123-1.00793137938329	chr8	123331010	123331325	+	0	NA	Intergenic	Intergenic	70891	NM_008320	15900	Mm.334861	NM_008320	ENSMUSG00000041515	Irf8	AI893568|ICSBP|IRF-8|Icsbp1|Myls	interferon regulatory factor 8	protein-coding
unique_peak2-35321-4-7--1.02346051385325-1.09384600808989	chr17	17234218	17234637	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-23920	NM_011765	22759	Mm.436633	NM_011765	ENSMUSG00000095990	Zfp97	NGD16-4	zinc finger protein 97	protein-coding
common_peak1-8876-20-16-0.400611943340854-0.507611860039817	chr11	43747158	43748056	+	0	NA	Intergenic	Intergenic	-32868	NM_001284381	11548	Mm.39086	NM_007416	ENSMUSG00000050541	Adra1b	[a]1b	adrenergic receptor, alpha 1b	protein-coding
common_peak1-11233-15-11-0.4272022498345-0.503257505534083	chr15	79403133	79403994	+	0	NA	intron (NR_103477, intron 7 of 8)	intron (NR_103477, intron 7 of 8)	-26392	NM_199080	67040	Mm.29644	NM_152806	ENSMUSG00000055065	Ddx17	2610007K22Rik|A430025E01Rik|AI047725|C80929|Gm926|p72	DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	protein-coding
common_peak2-20028-11-6-0.701338662194009-1.32595962126035	chr1	136229170	136229632	+	0	NA	5' UTR (NM_001144855, exon 1 of 29)	5' UTR (NM_001144855, exon 1 of 29)	104	NM_001144855	68507	Mm.295105	NM_001144855	ENSMUSG00000026458	Ppfia4	1110008G13Rik|AI448359|AI852265|C81506	protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4	protein-coding
unique_peak1-5995-11-0-3.50869358425161-3.61235994796777	chr6	100001216	100001826	+	0	NA	Intergenic	Intergenic	235831	NM_019743	56353	Mm.321633	NM_019743	ENSMUSG00000072872	Rybp	2410018J24Rik|DEDAF|YEAF1	RING1 and YY1 binding protein	protein-coding
common_peak1-10705-16-16-0.0308008010177225-0.307611222530525	chr14	57826179	57826702	+	0	NA	Intergenic	ERVL-B4-int|LTR|ERVL	-73992	NM_001010937	14623	Mm.25652	NM_008128	ENSMUSG00000040055	Gjb6	AA958971|Cx30|D14Bwg0506e	gap junction protein, beta 6	protein-coding
common_peak1-11251-36-15-1.47932108616775-3.70968671820992	chr15	80090254	80091559	+	0	NA	TTS (NM_175109)	TTS (NM_175109)	3830	NM_175109	66538	Mm.39485	NM_175109	ENSMUSG00000051518	Rps19bp1	2510038A11Rik|AI604923|S19BP	ribosomal protein S19 binding protein 1	protein-coding
unique_peak1-2062-8-1-2.00522241794757-2.05605744720049	chr15	31246977	31247456	+	0	NA	intron (NM_027496, intron 2 of 3)	MTEa|LTR|MaLR	50298	NM_001164441	67434	Mm.102470	NM_026153	ENSMUSG00000022237	Ankrd33b	0610012A05Rik|3021401C12Rik|5730557B15Rik	ankyrin repeat domain 33B	protein-coding
unique_peak1-6903-10-5-0.771452844287613-1.33892459842472	chr8	104472639	104472988	+	0	NA	Intergenic	Lx9|LINE|L1	836198	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
unique_peak1-5435-30-10-1.71024379085458-3.68843956647704	chr5	115158300	115159525	+	0	NA	intron (NM_029992, intron 2 of 12)	intron (NM_029992, intron 2 of 12)	1124	NM_029992	77832	Mm.239698	NM_029992	ENSMUSG00000002486	Tchp	A930031F18Rik|AV279199	trichoplein, keratin filament binding	protein-coding
unique_peak1-4896-9-2-1.60465090568306-1.87199725847353	chr4	45452635	45453141	+	0	NA	intron (NM_001033306, intron 5 of 5)	intron (NM_001033306, intron 5 of 5)	-31250	NM_001009949	230125	Mm.260210	NM_001009949	ENSMUSG00000045973	Slc25a51	9130208E07Rik|D130005A03Rik|Gm138|Mcart1	solute carrier family 25, member 51	protein-coding
common_peak2-29951-49-96--0.593629019161944-1.70018878372041	chr6	117716348	117717183	+	0	NA	Intergenic	Intergenic	-14978	NR_045731	72263	Mm.443289	NR_045731		1700030F04Rik	-	RIKEN cDNA 1700030F04 gene	ncRNA
common_peak2-23836-25-21-0.402418286707809-0.580176690544129	chr15	101927388	101928287	+	0	NA	TTS (NM_145625)	TTS (NM_145625)	-5582	NM_153533	209039	Mm.29389	NM_153533	ENSMUSG00000037003	Tenc1	C1-ten|nep|nph	tensin like C1 domain-containing phosphatase	protein-coding
unique_peak2-37670-3-5--0.998945590680433-0.96108193396963	chr5	93032341	93032765	+	0	NA	intron (NM_175096, intron 1 of 1)	CpG	476	NM_175096	52331	Mm.21965	NM_175096	ENSMUSG00000047963	Stbd1	D530019K15Rik|D5Ertd593e	starch binding domain 1	protein-coding
common_peak1-18824-55-96--0.395292971034426-0.920998256124998	chr9	8003578	8005515	+	0	NA	promoter-TSS (NM_009534)	promoter-TSS (NM_009534)	50	NM_001171147	22601	Mm.221992	NM_009534	ENSMUSG00000053110	Yap1	AI325207|Yap|Yap65|Yki|Yorkie	yes-associated protein 1	protein-coding
unique_peak1-348-7-1-1.79909083029819-1.80617997398389	chr1	135516682	135517147	+	0	NA	3' UTR (NM_144530, exon 17 of 17)	3' UTR (NM_144530, exon 17 of 17)	-10057	NM_009227	20643	Mm.249110	NM_009227	ENSMUSG00000090553	Snrpe	AL022645|C76690|SME	small nuclear ribonucleoprotein E	protein-coding
common_peak2-22810-15-13-0.204809828498052-0.368541233333383	chr14	14633363	14634022	+	0	NA	Intergenic	MTD|LTR|MaLR	130302	NM_177624	218739	Mm.39919	NM_177624	ENSMUSG00000044772	Sntn	A430083B19Rik	sentan, cilia apical structure protein	protein-coding
unique_peak2-36256-4-6--0.830815435910851-0.989110657569874	chr2	52676065	52676483	+	0	NA	Intergenic	Intergenic	-40628	NM_172409	71409	Mm.394427	NM_172409	ENSMUSG00000036053	Fmnl2	5430425K04Rik|Man	formin-like 2	protein-coding
common_peak1-17311-22-14-0.740393509478886-0.983972868822056	chr6	140508355	140509181	+	0	NA	intron (NM_144920, intron 15 of 30)	B1_Mus1|SINE|Alu	-62416	NM_178803	11569	Mm.86453	NM_009637	ENSMUSG00000030232	Aebp2	AU023766|B230313N05Rik	AE binding protein 2	protein-coding
common_peak1-15636-12-17--0.521149016354673-0.417187467413082	chr4	133967398	133968062	+	0	NA	exon (NM_001285874, exon 5 of 10)	exon (NM_001285874, exon 5 of 10)	8845	NM_001285877	100163	Mm.22116	NM_133880	ENSMUSG00000037366	Pafah2	2310074E22Rik|AI507170	platelet-activating factor acetylhydrolase 2	protein-coding
common_peak1-12196-46-56-0.0651059290840603-0.330987277729095	chr17	32388423	32389560	+	0	NA	intron (NM_020508, intron 2 of 19)	intron (NM_020508, intron 2 of 19)	10126	NR_102329	100043434		NR_102329		Gm4432	-	predicted gene 4432	pseudo
common_peak2-25567-5-9--1.02630843089322-1.21398586181642	chr19	6871550	6872138	+	0	NA	Intergenic	Intergenic	32590	NR_039555	100628576		NR_039555		Mir5046	mmu-mir-5046|mu-mir-5046	microRNA 5046	ncRNA
common_peak1-14390-22-19-0.325356010200042-0.479250674391597	chr2	170204878	170205924	+	0	NA	intron (NR_040610, intron 7 of 7)	(CCCCCT)n|Simple_repeat|Simple_repeat	23540	NR_040610	73303	Mm.443297	NR_040610	ENSMUSG00000086999	Bcas1os2	1700040N02Rik	breast carcinoma amplified sequence 1, opposite strand 2	ncRNA
common_peak1-8557-16-50--1.55416169970343-3.98915980442696	chr10	93889092	93889879	+	0	NA	Intergenic	Intergenic	-88117	NM_172051	319880	Mm.23047	NM_172051	ENSMUSG00000020023	Tmcc3	AW488095|C630016B22Rik|C88213|Tmcc1	transmembrane and coiled coil domains 3	protein-coding
common_peak2-26900-37-49--0.117863118288906-0.321605260051241	chr2	158409613	158410697	+	0	NA	Intergenic	Intergenic	26304	NR_040358	100045469	Mm.143404	NR_040358	ENSMUSG00000086496	Gm14204	OTTMUSG00000015935	predicted gene 14204	ncRNA
unique_peak2-36363-3-5--0.998945590680433-0.96108193396963	chr2	104477692	104478108	+	0	NA	intron (NM_145529, intron 3 of 20)	intron (NM_145529, intron 3 of 20)	47259	NM_001037326	228410	Mm.259876	NM_145529	ENSMUSG00000027176	Cstf3	4732468G05Rik|C79532|CstF-77	cleavage stimulation factor, 3' pre-RNA, subunit 3	protein-coding
unique_peak2-36367-6-5--0.0195643903408542-0.947717972411649	chr2	109420368	109420776	+	0	NA	Intergenic	Intergenic	-94285	NM_007540	12064	Mm.1442	NM_007540	ENSMUSG00000048482	Bdnf	-	brain derived neurotrophic factor	protein-coding
common_peak1-8207-17-8-1.04837133676273-1.30305656033811	chr10	5484144	5484685	+	0	NA	intron (NM_007956, intron 5 of 8)	Lx9|LINE|L1	206936	NM_022027	64009	Mm.331626	NM_022027	ENSMUSG00000019769	Syne1	8B|A330049M09Rik|BE692247|C130039F11Rik|CPG2|Myne1|mKIAA1756	spectrin repeat containing, nuclear envelope 1	protein-coding
common_peak2-23314-28-22-0.529397163764449-0.781990829058356	chr15	36819045	36820027	+	0	NA	Intergenic	Intergenic	-92852	NM_001253806	22631	Mm.3360	NM_011740	ENSMUSG00000022285	Ywhaz	1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	protein-coding
common_peak1-17854-127-181-0.14359187112936-0.52851329987269	chr7	112678517	112680891	+	0	NA	Intergenic	RMER13B|LTR|ERVK	-23170	NM_011421	20597	Mm.4628	NM_011421	ENSMUSG00000037049	Smpd1	A-SMase|ASM|Zn-SMase|aSMase	sphingomyelin phosphodiesterase 1, acid lysosomal	protein-coding
common_peak2-32379-10-19--0.965512749878593-0.917676348953458	chrX	108664352	108665073	+	0	NA	Intergenic	Intergenic	-13144	NM_025949	67071	Mm.37617	NM_025949	ENSMUSG00000025665	Rps6ka6	2610524K04Rik|RSK4|S6K-alpha-6	ribosomal protein S6 kinase polypeptide 6	protein-coding
common_peak2-21516-11-11--0.0762689164695427-0.301029995663976	chr11	94345969	94346567	+	0	NA	exon (NM_144827, exon 2 of 16)	exon (NM_144827, exon 2 of 16)	356	NM_144827	217116	Mm.156123	NM_144827	ENSMUSG00000020867	Spata20	Tisp78	spermatogenesis associated 20	protein-coding
common_peak2-20881-52-94--0.461595618065249-1.13694527029009	chr11	119602986	119603791	+	0	NA	intron (NM_028898, intron 4 of 33)	intron (NM_028898, intron 4 of 33)	92291	NR_045313	319454	Mm.442144	NR_045312	ENSMUSG00000085081	Rptoros	A430071A18Rik	regulatory associated protein of MTOR, complex 1, opposite strand	ncRNA
unique_peak1-6076-10-5-0.771452844287613-1.33892459842472	chr6	120171788	120172430	+	0	NA	exon (NM_198884, exon 9 of 20)	exon (NM_198884, exon 9 of 20)	72468	NM_198884	330406	Mm.321840	NM_198884	ENSMUSG00000041372	B4galnt3	AB114826|B4GalNAcT3|C330047A21	beta-1,4-N-acetyl-galactosaminyl transferase 3	protein-coding
common_peak2-20027-22-53--1.10760339707606-2.53311195323981	chr1	136140061	136140899	+	0	NA	Intergenic	Intergenic	-8446	NM_001008533	11539	Mm.298908	NM_009629	ENSMUSG00000042429	Adora1	A1-AR|A1AR|A1R|AA1R|AI848715|BB176431|Ri	adenosine A1 receptor	protein-coding
unique_peak1-1945-9-2-1.60465090568306-1.87199725847353	chr14	93069937	93070593	+	0	NA	Intergenic	B1F|SINE|Alu	1217842	NM_001271800	211712	Mm.37126	NM_001081377		Pcdh9	-	protocadherin 9	protein-coding
common_peak2-27519-40-60--0.271761654811788-0.459662873060288	chr3	95673747	95675779	+	0	NA	promoter-TSS (NM_078479)	promoter-TSS (NM_078479)	-221	NM_078479	66292	Mm.24108	NM_078479	ENSMUSG00000054312	Mrps21	1810031B19Rik	mitochondrial ribosomal protein S21	protein-coding
common_peak1-9369-9-18--1.05831410703937-0.965105923112245	chr11	97800548	97801093	+	0	NA	intron (NM_028199, intron 8 of 13)	intron (NM_028199, intron 8 of 13)	46940	NM_028199	72324	Mm.39617	NM_028199	ENSMUSG00000017417	Plxdc1	2410003I07Rik|AI848450|Tem7	plexin domain containing 1	protein-coding
unique_peak2-33547-3-6--1.22133801201688-1.08602067057793	chr11	78984922	78985321	+	0	NA	Intergenic	B3|SINE|B2	-25265	NM_013571	16706	Mm.4745	NM_013571	ENSMUSG00000018334	Ksr1	AW492498|B-KSR1|D11Bhm183e|D11Bhm184e|Ksr|RSU2|hb	kinase suppressor of ras 1	protein-coding
common_peak2-28222-8-8--0.164702583494742-1.00793137938329	chr4	118686321	118686716	+	0	NA	Intergenic	Intergenic	51946	NM_133892	100470	Mm.26698	NM_133892	ENSMUSG00000024903	Lao1	AW990848	L-amino acid oxidase 1	protein-coding
common_peak2-25990-23-16-0.634304663258741-0.82304638657543	chr19	55230543	55231373	+	0	NA	Intergenic	Intergenic	-24417	NM_009348	21684	Mm.42139	NM_009348	ENSMUSG00000024979	Tectb	Tctnb	tectorin beta	protein-coding
unique_peak1-3286-18-2-2.7279566505072-4.01305082679061	chr18	74545040	74545969	+	0	NA	Intergenic	Intergenic	-56769	NM_201600	17919	Mm.260098	NM_008661	ENSMUSG00000025885	Myo5b	AI661750|mKIAA1119	myosin VB	protein-coding
common_peak1-13367-53-43-0.681541393778631-1.80978279797654	chr19	46044431	46046362	+	0	NA	intron (NM_198296, intron 5 of 25)	PB1|SINE|Alu	27582	NM_198296	71617	Mm.210949	NM_198296	ENSMUSG00000039901	9130011E15Rik	AI431055|AW050122	RIKEN cDNA 9130011E15 gene	protein-coding
unique_peak2-38284-5-17--1.87430533744817-1.80287260729378	chr6	134199936	134200757	+	0	NA	intron (NM_007961, intron 5 of 7)	ID4|SINE|ID	-146001	NM_025778	66813	Mm.474472	NM_025778	ENSMUSG00000030200	Bcl2l14	4930452K23Rik|4933405K19Rik|9030625M01Rik|AI429211|Bclg	BCL2-like 14 (apoptosis facilitator)	protein-coding
common_peak1-13917-6-14--1.34149248522822-1.01572999746118	chr2	84549268	84549772	+	0	NA	intron (NM_144887, intron 2 of 11)	intron (NM_144887, intron 2 of 11)	5801	NM_144887	228136	Mm.288508	NM_144887	ENSMUSG00000034075	Zdhhc5	1110032A17Rik|AI451382|Zisp	zinc finger, DHHC domain containing 5	protein-coding
common_peak1-14176-44-27-1.01453791251093-2.67977800786504	chr2	143902977	143904768	+	0	NA	Intergenic	LTR16C|LTR|ERVL	45034	NM_207275	403171	Mm.389362	NM_207275	ENSMUSG00000037307	Banf2	4930517K23Rik|Baf-L|Baf-like|Gm115	barrier to autointegration factor 2	protein-coding
common_peak2-31807-67-114--0.30107856816138-0.764444856400014	chr9	37488683	37490128	+	0	NA	Intergenic	B4|SINE|B4	-12598	NM_172454	208098	Mm.217159	NM_172454	ENSMUSG00000011118	Panx3	3230401P04|4833413G11Rik	pannexin 3	protein-coding
common_peak1-9294-23-11-1.13680500378792-1.66030262873422	chr11	88629169	88630090	+	0	NA	Intergenic	Intergenic	49672	NR_038058	193280	Mm.396842	NR_038058		C030037D09Rik	9330160M04	RIKEN cDNA C030037D09 gene	ncRNA
common_peak1-19143-7-17--1.37083417114412-1.23399803405144	chr9	85843687	85844166	+	0	NA	Intergenic	Intergenic	107467	NM_001164792	21983	Mm.20864	NM_011627	ENSMUSG00000035274	Tpbg	5T4|AW495680|WAIF1	trophoblast glycoprotein	protein-coding
common_peak1-12711-31-23-0.640276170091967-1.01695873136768	chr18	46863253	46864263	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	24238	NM_033037	12583	Mm.241056	NM_033037	ENSMUSG00000033022	Cdo1	1300002L19Rik|Cdo|D18Ucla3	cysteine dioxygenase 1, cytosolic	protein-coding
common_peak2-23469-10-6-0.549060422951165-1.21398586181642	chr15	73150376	73150760	+	0	NA	intron (NM_007982, intron 7 of 31)	intron (NM_007982, intron 7 of 31)	103053	NM_007982	14083	Mm.254494	NM_007982	ENSMUSG00000022607	Ptk2	FAK|FRNK|Fadk|mKIAA4203|p125FAK	PTK2 protein tyrosine kinase 2	protein-coding
unique_peak2-37677-4-6--0.830815435910851-0.989110657569874	chr5	96783683	96784064	+	0	NA	Intergenic	MLT1D-int|LTR|MaLR	-19101	NM_175473	231470	Mm.291120	NM_175473	ENSMUSG00000034687	Fras1	E130113P14Rik|bl|mKIAA1500	Fraser syndrome 1 homolog (human)	protein-coding
unique_peak2-37553-7-7--0.200909169701811-0.97990265578305	chr5	31628498	31628898	+	0	NA	intron (NM_144909, intron 17 of 18)	intron (NM_144909, intron 17 of 18)	28744	NM_144909	231103	Mm.100043	NM_144909	ENSMUSG00000059434	Gckr	GKRP	glucokinase regulatory protein	protein-coding
common_peak2-24788-49-86--0.436659672823544-1.00422562882459	chr17	65612336	65614058	+	0	NA	intron (NM_001289485, intron 15 of 15)	L1_Mur3|LINE|L1	276925	NM_001008973	381107	Mm.141275	NM_001008973	ENSMUSG00000045036	Tmem232	E130009J12Rik|Gm940|Tes13-L|Tes13-S	transmembrane protein 232	protein-coding
unique_peak1-7051-22-11-1.06232160436625-1.51503956548638	chr9	60898941	60899828	+	0	NA	Intergenic	ORR1E|LTR|MaLR	34508	NR_040767	330956	Mm.207985	NR_040767		Gm5122	A430102L10	predicted gene 5122	ncRNA
common_peak2-26169-22-25--0.0531556130536872-0.301029995663976	chr2	20519321	20520147	+	0	NA	intron (NM_001081006, intron 3 of 21)	MER20B|DNA|MER1_type	78594	NM_001177631	208618	Mm.237935	NM_029895	ENSMUSG00000036617	Etl4	6620402G01Rik|9430077C05Rik|BC026657|E330027G05Rik|Etl-4|Skt	enhancer trap locus 4	protein-coding
unique_peak1-2863-15-5-1.4272022498345-1.61682445937017	chr17	34674489	34675226	+	0	NA	Intergenic	Intergenic	-20560	NM_030747	624681	Mm.471592	NM_030747	ENSMUSG00000058762	Btnl6	EG624681|Gm6519|NG13	butyrophilin-like 6	protein-coding
common_peak2-30714-8-10--0.454209200689727-1.078512453669	chr7	113262651	113263260	+	0	NA	Intergenic	Lx5|LINE|L1	-40293	NR_030719	668108	Mm.429088	NR_030719		Gm8979	EG668108|Gm21884	very large inducible GTPase 1 pseudogene	pseudo
common_peak2-19526-85-89-0.463550151794976-1.55556309115526	chr1	59669943	59671433	+	0	NA	intron (NM_001013771, intron 13 of 19)	RSINE1|SINE|B4	56990	NM_009460	22218	Mm.362118	NM_009460	ENSMUSG00000026021	Sumo1	GMP1|PIC1|SENTRIN|SMT3|SMT3H3|SMTP3|SUMO-1|Smt3C|Ubl1	SMT3 suppressor of mif two 3 homolog 1 (yeast)	protein-coding
common_peak2-20167-14-23--0.685746340363512-0.669502273696327	chr1	171150027	171150671	+	0	NA	Intergenic	Intergenic	311246	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
unique_peak1-1822-9-1-2.18961340640422-2.31132995230379	chr14	32628610	32629081	+	0	NA	intron (NM_001024604, intron 1 of 27)	intron (NM_001024604, intron 1 of 27)	14756	NM_001024604	105522	Mm.37660	NM_001024604	ENSMUSG00000014496	Ankrd28	AI465466|AI604979|E430019N21Rik|mKIAA0379	ankyrin repeat domain 28	protein-coding
common_peak2-25320-6-6--0.241956811677302-0.947717972411649	chr18	75456815	75457144	+	0	NA	promoter-TSS (NR_045393)	promoter-TSS (NR_045393)	4	NR_045393	100503117	Mm.250517	NR_045393		2010010A06Rik	5033420E22Rik	RIKEN cDNA 2010010A06 gene	ncRNA
common_peak1-10734-16-11-0.533301141546906-0.58239619684445	chr14	65358697	65359506	+	0	NA	intron (NM_001081177, intron 13 of 39)	intron (NM_001081177, intron 13 of 39)	87733	NM_001081177	16554	Mm.23611	NM_001081177	ENSMUSG00000060012	Kif13b	5330429L19Rik|6030414C01|AI429803|C130021D12Rik|GAKIN	kinesin family member 13B	protein-coding
unique_peak1-5337-36-19-1.15739299128039-2.66231292118422	chr5	90634120	90635482	+	0	NA	Intergenic	Intergenic	18220	NR_028088	231430	Mm.319697	NM_001033310	ENSMUSG00000035505	Cox18	BC038311	cytochrome c oxidase assembly protein 18	protein-coding
common_peak2-28253-15-10-0.552733131918359-0.604422558181019	chr4	126102777	126103302	+	0	NA	intron (NM_153402, intron 1 of 18)	RSINE1|SINE|B4	3747	NM_153402	214150	Mm.440915	NM_153402		Ago3	AW048688|C130014L07Rik|Eif2c3	argonaute RISC catalytic subunit 3	protein-coding
common_peak2-32007-10-10--0.103016273628528-0.301029995663987	chr9	71759964	71760488	+	0	NA	intron (NM_001253865, intron 3 of 14)	B1F1|SINE|Alu	-16323	NM_001253863	21406	Mm.171615	NM_011544	ENSMUSG00000032228	Tcf12	A130037E08Rik|ALF1|HEB|HEBAlt|HTF-4|HTF4|ME1|REB|bHLHb20	transcription factor 12	protein-coding
common_peak1-8961-11-9-0.186765489364251-0.344532117358383	chr11	57518524	57519099	+	0	NA	intron (NM_134189, intron 1 of 11)	RMER19C|LTR|ERVK	59867	NM_134189	171212	Mm.271670	NM_134189	ENSMUSG00000020520	Galnt10	AU018154|C330012K04Rik|GalNAc-T10|GalNAc-T9|Galnt9|ppGaNTase	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 10	protein-coding
unique_peak2-38835-4-6--0.830815435910851-0.989110657569874	chr7	141539374	141539713	+	0	NA	intron (NM_001081331, intron 2 of 7)	intron (NM_001081331, intron 2 of 7)	17024	NM_001199941	71007	Mm.334285	NM_001081331	ENSMUSG00000030994	D7Ertd443e	4933400E14Rik|FATS|Gm497	DNA segment, Chr 7, ERATO Doi 443, expressed	protein-coding
unique_peak2-33613-3-4--0.73591118484664-0.864171920961574	chr11	95006760	95007148	+	0	NA	5' UTR (NM_007867, exon 1 of 3)	5' UTR (NM_007867, exon 1 of 3)	161	NM_007867	13394	Mm.439766	NM_007867		Dlx4	Dlx-4|Dlx7	distal-less homeobox 4	protein-coding
common_peak2-32370-30-21-0.710243790854576-1.16836819221353	chrX	103557251	103558291	+	0	NA	Intergenic	L1_Mus2|LINE|L1	52606	NR_105803	102465963		NR_105803	miRBase:MI0021913	Mir6382	mmu-mir-6382	microRNA mir-6382	ncRNA
common_peak2-27709-10-9-0.0344872501214071-1.05503135781948	chr3	122363653	122364101	+	0	NA	Intergenic	Lx9|LINE|L1	-41245	NM_153118	214459	Mm.209491	NM_153118	ENSMUSG00000039735	Fnbp1l	2610318I01Rik|AW548221|TOCA1|toca-1	formin binding protein 1-like	protein-coding
common_peak2-24036-169-264-0.0981594296959312-0.459566837085394	chr16	24392183	24394965	+	0	NA	non-coding (NR_037954, exon 1 of 2)	non-coding (NR_037954, exon 1 of 2)	138	NM_178665	210126	Mm.209385	NM_178665	ENSMUSG00000033306	Lpp	9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16	LIM domain containing preferred translocation partner in lipoma	protein-coding
unique_peak2-34757-6-11--1.01956439034085-1.32595962126035	chr15	57716903	57717463	+	0	NA	intron (NM_024207, intron 1 of 7)	intron (NM_024207, intron 1 of 7)	6790	NM_024207	67819	Mm.289387	NM_024207	ENSMUSG00000022365	Derl1	1110021N07Rik|AI195141|AW551338|Derlin-1	Der1-like domain family, member 1	protein-coding
unique_peak2-34704-5-9--1.02630843089322-1.21398586181642	chr15	31188018	31188434	+	0	NA	intron (NM_146057, intron 2 of 3)	intron (NM_146057, intron 2 of 3)	34086	NM_146057	223453	Mm.222867	NM_146057	ENSMUSG00000039168	Dap	4921531N22Rik|AI789753|AU040360	death-associated protein	protein-coding
unique_peak1-1290-8-0-3.00522241794757-2.70926996097583	chr11	119563160	119563530	+	0	NA	intron (NM_028898, intron 3 of 33)	MERVL-int|LTR|ERVL	99036	NM_028898	74370	Mm.209933	NM_028898	ENSMUSG00000025583	Rptor	4932417H02Rik|Rap|Raptor|mKIAA1303	regulatory associated protein of MTOR, complex 1	protein-coding
common_peak1-16973-339-362-0.857256161408211-19.2245909067575	chr6	86524571	86528306	+	0	NA	Intergenic	RSINE1|SINE|B4	49043	NR_037961	72012	Mm.349174	NR_037960	ENSMUSG00000097048	1600020E01Rik	-	RIKEN cDNA 1600020E01 gene	ncRNA
common_peak2-23393-4-8--1.19338551529556-1.21878474469819	chr15	58544243	58544528	+	0	NA	Intergenic	Intergenic	110597	NM_175212	74868	Mm.293754	NM_175212	ENSMUSG00000062373	Tmem65	2610029O13Rik|4930438D12Rik	transmembrane protein 65	protein-coding
unique_peak1-4020-8-2-1.42025991722641-1.65811743852845	chr2	38678705	38679237	+	0	NA	intron (NM_010264, intron 3 of 10)	intron (NM_010264, intron 3 of 10)	-29284	NR_029568	387176		NR_029568	miRBase:MI0000223	Mir181a-2	Mirn181|Mirn181a|Mirn181a-2|miR-181|mir-181a	microRNA 181a-2	ncRNA
common_peak1-15673-15-5-1.4272022498345-1.61682445937017	chr4	137255873	137256600	+	0	NA	intron (NM_001081155, intron 2 of 24)	intron (NM_001081155, intron 2 of 24)	18654	NM_001256218	110351	Mm.180763	NM_029563	ENSMUSG00000041351	Rap1gap	1300019I11Rik|2310004O14Rik|AI427470|ARPP-90|Rap1GAP1|Rap1ga1	Rap1 GTPase-activating protein	protein-coding
common_peak1-19022-26-14-1.02100849654994-1.59386218057211	chr9	63721990	63722909	+	0	NA	Intergenic	Intergenic	-116648	NM_016769	17127	Mm.7320	NM_016769	ENSMUSG00000032402	Smad3	AU022421|Madh3	SMAD family member 3	protein-coding
unique_peak1-130-11-4-1.18676548936425-1.68134727924692	chr1	64788003	64788611	+	0	NA	Intergenic	(TTTG)n|Simple_repeat|Simple_repeat	-3983	NM_022721	14367	Mm.150813	NM_022721	ENSMUSG00000045005	Fzd5	5330434N09Rik|AI427138|Fz-5|Fz5|mFz5	frizzled homolog 5 (Drosophila)	protein-coding
common_peak2-25725-54-21-1.71365414299244-6.72245030936188	chr19	24016834	24017470	+	0	NA	intron (NM_177034, intron 10 of 12)	intron (NM_177034, intron 10 of 12)	88357	NM_001114174	381217	Mm.426078	NM_001114174	ENSMUSG00000071604	Fam189a2	AI414343|AI666772|Gm967	family with sequence similarity 189, member A2	protein-coding
common_peak1-18989-25-22-0.338287949288093-0.51032171069054	chr9	57536863	57537826	+	0	NA	intron (NM_009992, intron 1 of 6)	intron (NM_009992, intron 1 of 6)	1609	NM_009992	13076	Mm.14089	NM_009992	ENSMUSG00000032315	Cyp1a1	AHH|AHRR|CP11|Cyp1a2|P450-1	cytochrome P450, family 1, subfamily a, polypeptide 1	protein-coding
common_peak2-26346-22-48--0.967425739027804-1.90173050117047	chr2	35661157	35662573	+	0	NA	intron (NM_029774, intron 7 of 9)	intron (NM_029774, intron 7 of 9)	-12845	NR_040618	77665	Mm.400558	NR_040618	ENSMUSG00000086449	9030204H09Rik	-	RIKEN cDNA 9030204H09 gene	ncRNA
common_peak1-13415-45-35-0.69043302390256-1.54911055580825	chr19	53314579	53315866	+	0	NA	intron (NM_001164101, intron 12 of 13)	intron (NM_001164101, intron 12 of 13)	14473	NR_036590	69319	Mm.57452	NR_036590		1700001K23Rik	-	RIKEN cDNA 1700001K23 gene	ncRNA
common_peak1-11835-27-23-0.40658345017408-0.622271369641148	chr16	85133238	85134318	+	0	NA	intron (NM_001198823, intron 1 of 17)	intron (NM_001198823, intron 1 of 17)	40174	NM_001198825	11820	Mm.277585	NM_007471	ENSMUSG00000022892	App	Abeta|Abpp|Adap|Ag|Cvap|E030013M08Rik|betaApp	amyloid beta (A4) precursor protein	protein-coding
common_peak1-17757-18-15-0.312919151228352-0.456667090758524	chr7	89338093	89338936	+	0	NA	Intergenic	Intergenic	-69904	NM_001277955	20408	Mm.736	NM_017400		Sh3gl3	EEN-B2|SH3P13|Sh3d2c|Sh3d2c2	SH3-domain GRB2-like 3	protein-coding
common_peak1-7521-15-10-0.552733131918359-0.604422558181019	chr1	24005071	24005761	+	0	NA	intron (NM_026503, intron 2 of 2)	L1ME1|LINE|L1	7063	NM_026503	68002	Mm.250424	NM_026503	ENSMUSG00000026154	1110058L19Rik	1700001E18Rik|C6orf57	RIKEN cDNA 1110058L19 gene	protein-coding
unique_peak2-35668-4-4--0.345388608740609-0.864171920961574	chr18	9275326	9275675	+	0	NA	Intergenic	Intergenic	7307	NM_153086	225152	Mm.119273	NM_153086	ENSMUSG00000036855	Gjd4	9430022F06Rik|Cx39	gap junction protein, delta 4	protein-coding
common_peak1-18549-22-14-0.740393509478886-0.983972868822056	chr8	95809921	95810954	+	0	NA	Intergenic	Intergenic	-6802	NM_144930	234564	Mm.29110	NM_144930	ENSMUSG00000031725	Ces1f	AU018778|CesML1|TGH-2	carboxylesterase 1F	protein-coding
unique_peak2-38706-1-8--2.79698201165906-2.05605744720049	chr7	110121409	110121823	+	0	NA	TTS (NM_147109)	TTS (NM_147109)	888	NM_147109	259113	Mm.377854	NM_147109	ENSMUSG00000043354	Olfr577	MOR7-2	olfactory receptor 577	protein-coding
common_peak1-17629-29-45--0.411271875441902-0.573175361577109	chr7	46795550	46796725	+	0	NA	TTS (NM_001004139)	TTS (NM_001004139)	23001	NM_001004139	70227	Mm.333800	NM_001004139	ENSMUSG00000068959	Zfp619	3000002G13Rik	zinc finger protein 619	protein-coding
common_peak1-14310-9-8-0.0196884049619079-1.03275496310833	chr2	163072651	163073228	+	0	NA	intron (NM_001098799, intron 1 of 8)	intron (NM_001098799, intron 1 of 8)	21749	NM_001098799	269389	Mm.207709	NM_001098799	ENSMUSG00000074607	Tox2	AI851523|AV026525|BI987407|Gcx1|RxHMG1	TOX high mobility group box family member 2	protein-coding
common_peak1-16001-33-51--0.369102155615563-0.590471533980013	chr5	33820725	33821640	+	0	NA	Intergenic	ORR1E-int|LTR|MaLR	-44443	NM_011320	672284		NM_011320		Nkx1-1	Nkx-1.1|Sax2	NK1 transcription factor related, locus 1 (Drosophila)	protein-coding
common_peak2-23274-17-7-1.21829633820504-1.55050753388977	chr15	27422409	27422822	+	0	NA	intron (NM_020332, intron 1 of 11)	intron (NM_020332, intron 1 of 11)	26183	NM_020332	11732	Mm.265264	NM_020332	ENSMUSG00000022265	Ank	Ankh|D15Ertd221e|ank|mKIAA1581	progressive ankylosis	protein-coding
common_peak2-26380-64-82-0.0904069703616788-0.347023668913793	chr2	48813285	48814944	+	0	NA	intron (NM_029924, intron 1 of 16)	intron (NM_029924, intron 1 of 16)	9086	NM_029924	109241	Mm.440436	NM_029924	ENSMUSG00000036792	Mbd5	9430004D19Rik|AA536666|AI426407|C030040A15Rik|Gm1630|OTTMUSG00000012483	methyl-CpG binding domain protein 5	protein-coding
common_peak1-17053-9-12--0.510826311736872-0.394412252720706	chr6	97278302	97278909	+	0	NA	intron (NM_145148, intron 9 of 23)	intron (NM_145148, intron 9 of 23)	-75831	NM_001081157	320502	Mm.68163	NM_001081157	ENSMUSG00000044086	Lmod3	5430424A14Rik	leiomodin 3 (fetal)	protein-coding
common_peak2-28473-16-16-0.0308008010177225-0.307611222530525	chr4	155150833	155151601	+	0	NA	Intergenic	Intergenic	-2547	NM_147776	246228	Mm.26515	NM_147776	ENSMUSG00000042116	Vwa1	4932416A11Rik|WARP	von Willebrand factor A domain containing 1	protein-coding
common_peak2-21653-13-23--0.806490470083387-0.781208772652439	chr11	102406705	102407553	+	0	NA	intron (NM_001159492, intron 1 of 7)	intron (NM_001159492, intron 1 of 7)	10343	NM_001159492	237943	Mm.260282	NM_001159492	ENSMUSG00000034621	Gpatch8	5430405G24Rik|AU018890|ENSMUSG00000075516|Fbm1|Gpatc8|mKIAA0553	G patch domain containing 8	protein-coding
common_peak2-28766-15-22--0.511397205501357-0.50761186003982	chr5	48372262	48372712	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-1907	NR_111900	20563	Mm.289739	NM_178804		Slit2	Drad-1|E030015M03Rik|E130320P19Rik|Slil3|mKIAA4141|slit-2	slit homolog 2 (Drosophila)	protein-coding
common_peak2-27152-10-12--0.344024373132323-0.340565874754526	chr3	30105229	30105840	+	0	NA	Intergenic	Intergenic	-193408	NM_007963	14013	Mm.56965	NM_007963	ENSMUSG00000027684	Mecom	D630039M04Rik|Evi-1|Evi1|Jbo|Mds|Mds1|Mds1-Evi1|Prdm3|Znfpr1b1	MDS1 and EVI1 complex locus	protein-coding
common_peak2-26305-15-24--0.631691439219068-0.650819692678081	chr2	32450574	32451468	+	0	NA	intron (NM_011373, intron 3 of 4)	intron (NM_011373, intron 3 of 4)	-4208	NM_001025311	50935	Mm.88831	NM_016973	ENSMUSG00000026811	St6galnac6	ST6GalNAcVI|Siat7f	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6	protein-coding
common_peak2-29709-46-36-0.688542577619851-1.61783625824857	chr6	83165562	83166307	+	0	NA	Intergenic	Intergenic	-21435	NM_001166067	232156	Mm.333189	NM_001166067	ENSMUSG00000068323	Slc4a5	C330006M16|C330016K18Rik	solute carrier family 4, sodium bicarbonate cotransporter, member 5	protein-coding
common_peak1-11506-32-74--0.94972667127622-2.69422232619315	chr16	8830102	8831207	+	0	NA	exon (NM_001081400, exon 1 of 4)	exon (NM_001081400, exon 1 of 4)	461	NM_001081400	69053	Mm.390868	NM_001081400	ENSMUSG00000022507	1810013L24Rik	1110017P05Rik|3010002C02Rik|AA792997|AW124177|Gm19906|R74903	RIKEN cDNA 1810013L24 gene	protein-coding
unique_peak1-4994-9-5-0.604650905683064-1.21398586181642	chr4	116673351	116673873	+	0	NA	intron (NM_175244, intron 15 of 20)	L2a|LINE|L2	5659	NM_175244	76608	Mm.251420	NM_175244	ENSMUSG00000046861	Hectd3	1700064K09Rik|AI467540|AW743312	HECT domain containing 3	protein-coding
common_peak2-31698-17-18--0.0296311752385474-0.306899554715732	chr9	46120306	46121101	+	0	NA	intron (NM_183104, intron 3 of 12)	intron (NM_183104, intron 3 of 12)	7366	NM_183104	74361	Mm.159169	NM_183104	ENSMUSG00000056617	4931429L15Rik	-	RIKEN cDNA 4931429L15 gene	protein-coding
common_peak1-15868-10-17--0.813509656433543-0.699649909729472	chr5	5360087	5360648	+	0	NA	intron (NM_011074, intron 2 of 14)	intron (NM_011074, intron 2 of 14)	19884	NM_011074	18647	Mm.389061	NM_011074	ENSMUSG00000028926	Cdk14	Pftk1|mKIAA0834	cyclin-dependent kinase 14	protein-coding
unique_peak2-34876-8-14--0.901668177660948-0.660903317613906	chr15	78844050	78844703	+	0	NA	Intergenic	Intergenic	-2905	NR_045746	100038602	Mm.417074	NR_045746		Gm10865	ENSMUSG00000075558	predicted gene 10865	ncRNA
unique_peak1-3673-9-1-2.18961340640422-2.31132995230379	chr19	41600931	41601489	+	0	NA	Intergenic	Intergenic	-22919	NM_172154	212391	Mm.422910	NM_172154	ENSMUSG00000025019	Lcor	3110023F06Rik|A630025C20Rik|Mlr2|mKIAA1795	ligand dependent nuclear receptor corepressor	protein-coding
common_peak2-25115-37-43-0.0665614528485214-0.322992865635707	chr18	38080350	38081974	+	0	NA	intron (NM_007858, intron 1 of 26)	intron (NM_007858, intron 1 of 26)	13903	NM_007858	13367	Mm.195916	NM_007858	ENSMUSG00000024456	Diap1	D18Wsu154e|Dia1|Diaph1|Drf1|mKIAA4062|p140mDia	diaphanous homolog 1 (Drosophila)	protein-coding
common_peak2-31994-14-6-1.09186123830004-1.16633110333236	chr9	70833697	70834123	+	0	NA	Intergenic	MTD|LTR|MaLR	-51295	NM_008280	15450	Mm.390187	NM_008280	ENSMUSG00000032207	Lipc	AI256194|HL|Hpl	lipase, hepatic	protein-coding
common_peak2-28863-37-52--0.20192738307738-0.380848279231604	chr5	74535257	74536106	+	0	NA	Intergenic	Intergenic	46126	NR_031758	100313943	Mm.46547	NR_031758	ENSMUSG00000093355	Snora26	MBI-6	small nucleolar RNA, H/ACA box 26	snoRNA
common_peak1-18635-17-25--0.482143379936054-0.479250674391597	chr8	110997353	110998333	+	0	NA	Intergenic	URR1B|DNA|MER1_type	110734	NR_077224	109215	Mm.65282	NR_077224		3010033K07Rik	-	RIKEN cDNA 3010033K07 gene	ncRNA
common_peak2-20257-6-6--0.241956811677302-0.947717972411649	chr1	185363835	185364347	+	0	NA	Intergenic	MERVL-int|LTR|ERVL	479172	NM_016928	53791	Mm.116894	NM_016928	ENSMUSG00000079164	Tlr5	-	toll-like receptor 5	protein-coding
common_peak2-21003-71-88-0.168710747753574-0.467468668135477	chr11	23770046	23771733	+	0	NA	intron (NM_172555, intron 13 of 21)	intron (NM_172555, intron 13 of 21)	24381	NM_172555	216578	Mm.470599	NM_172555	ENSMUSG00000020273	Papolg	9630006B20Rik	poly(A) polymerase gamma	protein-coding
common_peak1-16047-102-167--0.121228945939206-0.415384892299814	chr5	38560548	38563180	+	0	NA	Intergenic	MLT1D|LTR|MaLR	-11158	NM_010942	18196	Mm.7414	NM_010942	ENSMUSG00000029126	Nsg1	Neep21|m234|p21	neuron specific gene family member 1	protein-coding
common_peak2-25759-38-31-0.57145265929853-1.10165134406427	chr19	29805778	29806796	+	0	NA	intron (NM_172836, intron 5 of 7)	intron (NM_172836, intron 5 of 7)	33856	NM_029993	77836	Mm.138437	NM_029993		Mlana	A930034P04Rik|Mart1	melan-A	protein-coding
common_peak2-21972-23-45--0.801794451547932-1.41868709588403	chr12	49382537	49383786	+	0	NA	Intergenic	L1_Mur2|LINE|L1	-1100709	NM_001160112	15228	Mm.4704	NM_008241	ENSMUSG00000020950	Foxg1	2900064B05Rik|BF-1|Bf1|Hfh9|Hfhbf1	forkhead box G1	protein-coding
common_peak1-11696-11-12--0.191746133889479-0.310474156842889	chr16	31200173	31200810	+	0	NA	intron (NM_030138, intron 1 of 22)	CpG	833	NM_030138	78618	Mm.274646	NM_030138	ENSMUSG00000049076	Acap2	4832442G16|9530039J15Rik|CNT-B2|Centb2|mKIAA0041	ArfGAP with coiled-coil, ankyrin repeat and PH domains 2	protein-coding
common_peak2-22860-15-8-0.842239749113344-0.891319708951327	chr14	26637464	26637923	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-23948	NM_013469	11744	Mm.294083	NM_013469	ENSMUSG00000021866	Anxa11	A830099O17Rik|Anx11	annexin A11	protein-coding
unique_peak2-37494-2-8--2.08737925770563-1.65811743852845	chr5	5687252	5687747	+	0	NA	intron (NM_028734, intron 1 of 5)	intron (NM_028734, intron 1 of 5)	6590	NM_001285471	74051	Mm.274956	NM_028734	ENSMUSG00000015653	Steap2	4921538B17Rik|AI930049|AW045895|IPCA-1|IPCA1|PCANAP1|STAMP1|STMP	six transmembrane epithelial antigen of prostate 2	protein-coding
common_peak1-17987-17-21--0.24113528043226-0.322753776620787	chr7	137410157	137410822	+	0	NA	promoter-TSS (NM_010207)	promoter-TSS (NM_010207)	-167	NM_201601	14183	Mm.16340	NM_010207	ENSMUSG00000030849	Fgfr2	AU043015|AW556123|Bek|Fgfr-2|Fgfr-7|Fgfr7|KGFR|KGFRTr|svs	fibroblast growth factor receptor 2	protein-coding
unique_peak1-4135-9-1-2.18961340640422-2.31132995230379	chr2	92429320	92429841	+	0	NA	Intergenic	Intergenic	-2783	NR_106080	102466819		NR_106080	miRBase:MI0023716	Mir7221	mmu-mir-7221	microRNA mir-7221	ncRNA
common_peak1-18923-35-50--0.241055083508991-0.415549183621393	chr9	44767193	44768038	+	0	NA	intron (NM_145400, intron 3 of 19)	intron (NM_145400, intron 3 of 19)	6068	NM_145400	140630	Mm.215069	NM_145400	ENSMUSG00000059890	Ube4a	4732444G18Rik|9930123J21Rik|UFD2b	ubiquitination factor E4A	protein-coding
unique_peak2-38083-3-5--0.998945590680433-0.96108193396963	chr6	52506137	52506499	+	0	NA	intron (NM_145567, intron 6 of 7)	intron (NM_145567, intron 6 of 7)	63873	NR_046049	74304	Mm.490579	NR_046049		1700094M24Rik	-	RIKEN cDNA 1700094M24 gene	ncRNA
unique_peak1-5803-12-6-0.841421063030034-1.58711810488664	chr6	67013730	67014451	+	0	NA	intron (NR_040278, intron 2 of 6)	L1ME1|LINE|L1	-26689	NM_007836	13197	Mm.72235	NM_007836	ENSMUSG00000036390	Gadd45a	AA545191|Ddit1|GADD45	growth arrest and DNA-damage-inducible 45 alpha	protein-coding
common_peak1-15645-14-29--1.00767443525087-1.28534286439185	chr4	134930871	134931613	+	0	NA	intron (NM_145555, intron 3 of 4)	intron (NM_145555, intron 3 of 4)	10345	NM_001168498	230822	Mm.35548	NM_145555	ENSMUSG00000043924	Ncmap	A330049M08Rik|AA545175|Mp11	noncompact myelin associated protein	protein-coding
common_peak1-11412-21-20-0.177171842487475-0.380101753845079	chr15	99074336	99075217	+	0	NA	intron (NM_016766, intron 10 of 14)	intron (NM_016766, intron 10 of 14)	-7443	NR_045627	73600	Mm.475134	NR_045627		1700120C14Rik	-	RIKEN cDNA 1700120C14 gene	ncRNA
common_peak1-8370-14-26--0.855671341805824-0.949797625454538	chr10	60277399	60278062	+	0	NA	intron (NM_029770, intron 1 of 16)	intron (NM_029770, intron 1 of 16)	16599	NM_029770	107449	Mm.290433	NM_029770	ENSMUSG00000020099	Unc5b	6330415E02Rik|A630020F16|D10Bwg0792e|Unc5h2	unc-5 homolog B (C. elegans)	protein-coding
unique_peak2-34176-6-10--0.894033508256995-1.21398586181642	chr13	34037388	34038045	+	0	NA	intron (NR_040707, intron 1 of 4)	L1Md_F2|LINE|L1	-9764	NM_001164117	20719	Mm.252210	NM_009254	ENSMUSG00000060147	Serpinb6a	4930482L21Rik|D330015H01Rik|PI-6|Serpinb6|Spi3|ovalbumin	serine (or cysteine) peptidase inhibitor, clade B, member 6a	protein-coding
common_peak2-21696-14-23--0.685746340363512-0.669502273696327	chr11	106487058	106487861	+	0	NA	Intergenic	Intergenic	-13215	NM_198292	21763	Mm.102407	NM_198292	ENSMUSG00000040548	Tex2	4930568E07Rik|AI553404|Def-5|Taz4	testis expressed gene 2	protein-coding
unique_peak2-35939-3-5--0.998945590680433-0.96108193396963	chr19	9065022	9065521	+	0	NA	intron (NR_104460, intron 1 of 6)	intron (NR_104460, intron 1 of 6)	1497	NM_001286518	66395	Mm.203866	NM_009643	ENSMUSG00000069833	Ahnak	DY6	AHNAK nucleoprotein (desmoyokin)	protein-coding
common_peak1-10007-9-12--0.510826311736872-0.394412252720706	chr13	5804293	5804817	+	0	NA	Intergenic	B4|SINE|B4	52783	NR_045891	71867	Mm.179181	NR_045891		1700016G22Rik	-	RIKEN cDNA 1700016G22 gene	ncRNA
common_peak1-17510-8-12--0.695217300193522-0.475924844171029	chr7	27258160	27258720	+	0	NA	intron (NM_172896, intron 10 of 10)	ORR1D2|LTR|MaLR	38308	NM_172896	243880	Mm.322356	NM_172896	ENSMUSG00000040601	Nlrp4a	E330021B02|E330028A19Rik|NALP4|Nalp-eta|Nalp-ita|Nalp4a	NLR family, pyrin domain containing 4A	protein-coding
common_peak1-15170-21-27--0.237865656791368-0.339372226903478	chr3	152123074	152123683	+	0	NA	3' UTR (NM_001080755, exon 14 of 14)	3' UTR (NM_001080755, exon 14 of 14)	63730	NM_001287139	108946	Mm.379292	NM_198416	ENSMUSG00000039068	Zzz3	3110065C23Rik|6430567E01Rik|AA408566|AI481057|AW556059|R75514	zinc finger, ZZ domain containing 3	protein-coding
common_peak1-12437-12-13--0.158578936969966-0.301029995663979	chr17	78882158	78882664	+	0	NA	Intergenic	Intergenic	-24992	NM_001197028	74199	Mm.292983	NM_028813	ENSMUSG00000024076	Vit	1700052E02Rik|1700110E08Rik|2810429K11Rik	vitrin	protein-coding
common_peak1-17806-28-55--0.754395802236141-1.50810240303318	chr7	100590633	100591554	+	0	NA	Intergenic	Lx9|LINE|L1	362704	NM_021427	58238	Mm.113787	NM_021427		Fam181b	A830059I20Rik|AB041569	family with sequence similarity 181, member B	protein-coding
unique_peak1-6175-16-0-4.11826364226806-5.41853992195166	chr6	145761172	145761839	+	0	NA	intron (NM_027760, intron 1 of 3)	B2_Mm2|SINE|B2	4602	NM_027760	71323	Mm.158669	NM_027760	ENSMUSG00000030259	Rassf8	5133400D11Rik|AA815821|AW123240|Hoj1|mHoj-1	Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	protein-coding
common_peak1-11391-104-121-0.374007863649271-1.36967561967032	chr15	97830590	97833276	+	0	NA	intron (NM_031163, intron 1 of 53)	intron (NM_031163, intron 1 of 53)	3222	NM_031163	12824	Mm.2423	NM_031163	ENSMUSG00000022483	Col2a1	Col2|Col2a|Col2a-1|Del1|Dmm|Lpk|M100856|Rgsc856	collagen, type II, alpha 1	protein-coding
common_peak1-14440-19-5-1.81772482594053-2.59995804677862	chr2	181519643	181520329	+	0	NA	intron (NM_001171615, intron 2 of 22)	intron (NM_001171615, intron 2 of 22)	-11026	NM_001171680	17932	Mm.458718	NM_008665	ENSMUSG00000010505	Myt1	Nzf2|Nzf2a|Nzf2b|Nztf2	myelin transcription factor 1	protein-coding
unique_peak1-2776-18-11-0.727956650507195-0.876666802405043	chr17	6702596	6703412	+	0	NA	Intergenic	Intergenic	-47940	NM_001166627	100040531	Mm.457987	NM_001166627	ENSMUSG00000095677	Dynlt1f	100040631|Dynlt1e	dynein light chain Tctex-type 1F	protein-coding
common_peak2-29126-10-21--1.10301627362853-1.16735254179725	chr5	124220787	124221408	+	0	NA	exon (NM_001042421, exon 19 of 64)	exon (NM_001042421, exon 19 of 64)	21362	NM_001042421	208628	Mm.441089	NM_001042421	ENSMUSG00000029414	Kntc1	D330012D13	kinetochore associated 1	protein-coding
common_peak1-15013-9-14--0.717277189204299-0.53895475198017	chr3	116507676	116508152	+	0	NA	intron (NM_001081326, intron 2 of 33)	intron (NM_001081326, intron 2 of 33)	3170	NM_001081326	77559	Mm.237099	NM_001081326	ENSMUSG00000033400	Agl	1110061O17Rik|9430004C13Rik|9630046L06Rik|AI850929|C77197	amylo-1,6-glucosidase, 4-alpha-glucanotransferase	protein-coding
common_peak2-30592-31-27-0.41788374875552-0.64171680596148	chr7	80827760	80828647	+	0	NA	Intergenic	Lx9|LINE|L1	3246	NR_033604	244061	Mm.484605	NR_033604		Gm4971	EG244061	Smad nuclear interacting protein 1 pseudogene	pseudo
common_peak1-17310-60-72-0.164467302740514-0.442133957617833	chr6	140423697	140425395	+	0	NA	intron (NM_144920, intron 3 of 30)	intron (NM_144920, intron 3 of 30)	51926	NM_144920	109135	Mm.247670	NM_144920	ENSMUSG00000030231	Plekha5	2810431N21Rik|AI428202|AK129423|AMH-Cre|Ayu21-9|Gt(pU21)9Imeg|Pepp2|Tg(AMH-cre)1Flor	pleckstrin homology domain containing, family A member 5	protein-coding
common_peak1-11744-13-32--1.26592208872068-1.87214134458702	chr16	35363435	35364136	+	0	NA	intron (NM_133704, intron 1 of 6)	CpG	219	NM_133704	317717	Mm.259164	NM_133704	ENSMUSG00000034473	Sec22a	1810005C06Rik|Sec22l2	SEC22 vesicle trafficking protein homolog A (S. cerevisiae)	protein-coding
unique_peak2-38453-3-7--1.41398308995928-1.23214870625617	chr7	28392877	28393438	+	0	NA	intron (NM_007434, intron 1 of 13)	intron (NM_007434, intron 1 of 13)	2278	NM_007434	11652	Mm.177194	NM_007434	ENSMUSG00000004056	Akt2	2410016A19Rik|AW554154|PKB|PKBbeta	thymoma viral proto-oncogene 2	protein-coding
common_peak1-18788-24-57--1.06477109235986-2.49326259230166	chr9	13827583	13828518	+	0	NA	Intergenic	Intergenic	195879	NM_176836	72826	Mm.246174	NM_176836	ENSMUSG00000037808	Fam76b	2810485I05Rik|C78303	family with sequence similarity 76, member B	protein-coding
unique_peak2-37013-6-6--0.241956811677302-0.947717972411649	chr3	123038830	123039154	+	0	NA	intron (NM_027135, intron 10 of 22)	intron (NM_027135, intron 10 of 22)	49916	NM_201638	210529	Mm.260039	NM_201638	ENSMUSG00000028114	Mettl14	G430022H21Rik|mKIAA1627	methyltransferase like 14	protein-coding
common_peak2-20185-23-17-0.551842503066768-0.713114929964887	chr1	172309742	172310455	+	0	NA	intron (NM_027528, intron 3 of 7)	intron (NM_027528, intron 3 of 7)	71106	NM_001039593	76925	Mm.33631	NM_001039593	ENSMUSG00000042800	1700015E13Rik	-	RIKEN cDNA 1700015E13 gene	protein-coding
common_peak1-12657-28-17-0.88303411837915-1.43262124146305	chr18	36391587	36392998	+	0	NA	Intergenic	Intergenic	-35478	NM_001167891	100042150	Mm.380390	NM_001167891	ENSMUSG00000060275	Nrg2	Don1|NTAK	neuregulin 2	protein-coding
unique_peak2-33196-6-9--0.75652998450706-1.11707584880836	chr10	110745557	110746129	+	0	NA	Intergenic	Intergenic	10108	NM_027914	71769	Mm.45256	NM_027914	ENSMUSG00000035759	Bbs10	1300007O09Rik|AI452285	Bardet-Biedl syndrome 10 (human)	protein-coding
common_peak2-24650-11-12--0.191746133889479-0.310474156842889	chr17	35551489	35552083	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-10006	NM_023124	15019	Mm.486287	NM_023124		H2-Q8	H-2Q8|MMS10-T|Ms10t|Qa-2|Qa-8|Qa8	histocompatibility 2, Q region locus 8	protein-coding
common_peak2-22695-34-50--0.290356814970229-0.452279894471924	chr13	98814549	98815323	+	0	NA	intron (NM_012026, intron 6 of 35)	MTB|LTR|MaLR	161184	NM_012026	110596	Mm.252718	NM_012026	ENSMUSG00000021662	Arhgef28	9230110L08Rik|AI323540|D13Bwg1089e|RIP2|Rgnef|RhoGEF|Rhoip2|p190RhoGEF	Rho guanine nucleotide exchange factor (GEF) 28	protein-coding
unique_peak1-5407-10-3-1.35641534500877-1.75805390616669	chr5	107756010	107756530	+	0	NA	Intergenic	Lx4A|LINE|L1	-3943	NM_001079873	114642	Mm.182836	NM_054054	ENSMUSG00000029279	Brdt	7420412D09Rik|Brd6|Fsrg3	bromodomain, testis-specific	protein-coding
common_peak1-15637-13-21--0.680959587999529-0.607095980551316	chr4	134287473	134288090	+	0	NA	Intergenic	Intergenic	-27576	NM_207237	230815	Mm.18905	NM_207237	ENSMUSG00000037306	Man1c1	AI593348	mannosidase, alpha, class 1C, member 1	protein-coding
unique_peak2-33205-6-13--1.2419568116773-1.58711810488664	chr10	111672375	111672844	+	0	NA	Intergenic	Intergenic	-35570	NM_001025581	268345	Mm.336242	NM_001025581	ENSMUSG00000035681	Kcnc2	AW047325|B230117I07|KShIIIA|Kv3.2	potassium voltage gated channel, Shaw-related subfamily, member 2	protein-coding
unique_peak2-38047-8-9--0.316705676939792-1.03275496310833	chr6	39372888	39373350	+	0	NA	Intergenic	Intergenic	-2751	NM_018810	54484	Mm.270484	NM_018810	ENSMUSG00000029922	Mkrn1	RFP	makorin, ring finger protein, 1	protein-coding
unique_peak2-36365-8-14--0.901668177660948-0.660903317613906	chr2	104742332	104742891	+	0	NA	intron (NM_177600, intron 1 of 17)	RMER2|LTR|ERV1	16130	NM_177600	211936	Mm.416538	NM_177600	ENSMUSG00000045106	Ccdc73	2210415I11Rik|4931417A20|AV080665|BC095976	coiled-coil domain containing 73	protein-coding
common_peak2-21395-73-119--0.214495589183297-0.551651255369988	chr11	80382338	80384086	+	0	NA	intron (NM_177390, intron 20 of 21)	intron (NM_177390, intron 20 of 21)	92664	NM_009871	12569	Mm.142275	NM_009871	ENSMUSG00000048895	Cdk5r1	Cdk5r|D11Bwg0379e|p25|p35	cyclin-dependent kinase 5, regulatory subunit 1 (p35)	protein-coding
common_peak2-21922-18-29--0.593971444380167-0.662033714151235	chr12	17302829	17303929	+	0	NA	intron (NM_133699, intron 6 of 13)	intron (NM_133699, intron 6 of 13)	28157	NM_133699	68775	Mm.178798	NM_133699	ENSMUSG00000020566	Atp6v1c2	1110038G14Rik	ATPase, H+ transporting, lysosomal V1 subunit C2	protein-coding
common_peak1-14046-15-14-0.105274154947137-0.330004445983672	chr2	119046895	119047687	+	0	NA	intron (NM_028104, intron 1 of 3)	RSINE1|SINE|B4	8310	NM_028104	72112	Mm.46317	NM_028104	ENSMUSG00000027317	Ppp1r14d	2010107K19Rik|GBPI-1|Ppp1r14	protein phosphatase 1, regulatory (inhibitor) subunit 14D	protein-coding
common_peak1-14402-17-10-0.75886471956774-0.917676348953458	chr2	173273563	173274373	+	0	NA	Intergenic	ORR1D1-int|LTR|MaLR	-74125	NM_028158	72221	Mm.46132	NM_028158	ENSMUSG00000027518	1700021F07Rik	-	RIKEN cDNA 1700021F07 gene	protein-coding
common_peak1-11737-12-9-0.326847890200276-0.459837087125828	chr16	33873373	33874053	+	0	NA	intron (NM_010580, intron 3 of 14)	intron (NM_010580, intron 3 of 14)	43962	NM_001145884	16419	Mm.6424	NM_010580	ENSMUSG00000022817	Itgb5	AA475909|AI874634|ESTM23|[b]-5|[b]5|[b]5A|[b]5B|beta-5|beta5	integrin beta 5	protein-coding
common_peak1-15125-11-24--1.13516260552311-1.3750876294627	chr3	138741656	138742271	+	0	NA	Intergenic	Intergenic	-3798	NM_001040690	229877	Mm.28893	NM_145544	ENSMUSG00000028149	Rap1gds1	BC011279|GDS1	RAP1, GTP-GDP dissociation stimulator 1	protein-coding
unique_peak2-36133-7-5-0.214128329577033-1.01466476204226	chr2	14279774	14280182	+	0	NA	Intergenic	(T)n|Simple_repeat|Simple_repeat	-30047	NM_001012305	277468	Mm.44662	NM_001012305	ENSMUSG00000036949	Slc39a12	AW046938|Gm731	solute carrier family 39 (zinc transporter), member 12	protein-coding
unique_peak1-6558-8-2-1.42025991722641-1.65811743852845	chr7	130644282	130644729	+	0	NA	promoter-TSS (NM_001081329)	promoter-TSS (NM_001081329)	-542	NM_001081329	210162	Mm.135397	NM_175435	ENSMUSG00000030757	Zkscan2	9430065N20Rik|AW493225|Zfp694	zinc finger with KRAB and SCAN domains 2	protein-coding
common_peak1-11972-13-18--0.469455482805817-0.409888142029227	chr17	6835365	6836038	+	0	NA	Intergenic	Intergenic	-10058	NR_028305	100040525	Mm.472852	NR_028305		Tmem181c-ps	100040596|ENSMUSG00000079729|ENSMUSG00000079731|Tmem181d-ps	transmembrane protein 181C, pseudogene	pseudo
common_peak2-30118-8-8--0.164702583494742-1.00793137938329	chr6	136899919	136900338	+	0	NA	Intergenic	L1MDa|LINE|L1	-2916	NM_023898	78600	Mm.290622	NM_023898		Pde6h	A930033D18Rik|PDEgamma	phosphodiesterase 6H, cGMP-specific, cone, gamma	protein-coding
unique_peak1-6119-9-3-1.18961340640422-1.57096726280955	chr6	128754113	128754751	+	0	NA	Intergenic	ORR1D2|LTR|MaLR	-15773	NM_001159904	17059	Mm.480764	NM_008527	ENSMUSG00000030325	Klrb1c	AI462337|CD161|Ly-59|Ly55c|Ly59|NK-RP1|NK1.1|NKR-P1.9|NKRP1|NKRP140|Nk-1|Nk-1.2|Nk1|Nk1.2|Nkrp1c|ly-55c	killer cell lectin-like receptor subfamily B member 1C	protein-coding
common_peak1-14367-13-20--0.613845392140992-0.532159081577619	chr2	167503232	167503940	+	0	NA	Intergenic	HAL1-3A_ME|LINE|L1	-10829	NM_009883	12608	Mm.439656	NM_009883	ENSMUSG00000056501	Cebpb	C/EBPbeta|CRP2|IL-6DBP|LAP|LIP|NF-IL6|NF-M|Nfil6	CCAAT/enhancer binding protein (C/EBP), beta	protein-coding
common_peak2-26530-46-65--0.146398176109652-0.344471032458745	chr2	91526685	91527525	+	0	NA	intron (NM_145528, intron 6 of 15)	GA-rich|Low_complexity|Low_complexity	23644	NM_145528	51897	Mm.28492	NM_145528	ENSMUSG00000027244	Atg13	1110053A20Rik|D2Ertd391e|Harbi1	autophagy related 13	protein-coding
common_peak2-29487-40-49-0.0151194929763738-0.309716464454027	chr6	31125363	31127038	+	0	NA	intron (NR_110470, intron 2 of 2)	intron (NR_110470, intron 2 of 2)	42274	NR_110470	232685	Mm.443019	NM_144555		Lincpint	MNCb-1768|Pint|linc-Pint	long intergenic non-protein coding RNA, Trp53 induced transcript	ncRNA
common_peak2-24471-20-39--0.83385331029617-1.34355844763204	chr17	24454599	24455301	+	0	NA	intron (NM_001031621, intron 9 of 29)	intron (NM_001031621, intron 9 of 29)	29247	NM_001031621	381072	Mm.328842	NM_001031621	ENSMUSG00000035435	Abca17	-	ATP-binding cassette, sub-family A (ABC1), member 17	protein-coding
unique_peak2-33951-5-9--1.02630843089322-1.21398586181642	chr12	78911062	78911416	+	0	NA	Intergenic	L1MC4|LINE|L1	400111	NM_001252616	53618	Mm.35628	NM_016893	ENSMUSG00000021065	Fut8	-	fucosyltransferase 8	protein-coding
unique_peak2-35886-5-6--0.511735258063458-0.947717972411649	chr18	84951748	84952089	+	0	NA	Intergenic	Intergenic	62284	NM_173770	240479	Mm.472378	NM_173770	ENSMUSG00000047992	Fam69c	B230399E16Rik	family with sequence similarity 69, member C	protein-coding
common_peak2-20034-27-30-0.0373496405083609-0.315041925765932	chr1	136695585	136696449	+	0	NA	intron (NM_001081307, intron 18 of 23)	(CAGG)n|Simple_repeat|Simple_repeat	4281	NR_015606	329251	Mm.188709	NM_001081307	ENSMUSG00000073557	Ppp1r12b	1810037O03Rik|9530009M10Rik|AI132431|Mypt2	protein phosphatase 1, regulatory (inhibitor) subunit 12B	protein-coding
unique_peak1-4486-9-3-1.18961340640422-1.57096726280955	chr3	94813913	94814406	+	0	NA	intron (NM_030074, intron 2 of 8)	intron (NM_030074, intron 2 of 8)	5001	NM_030074	78266	Mm.389478	NM_030074	ENSMUSG00000019338	Zfp687	4931408L03Rik|Znf687|mKIAA1441	zinc finger protein 687	protein-coding
unique_peak2-39271-4-7--1.02346051385325-1.09384600808989	chr8	120633810	120634168	+	0	NA	Intergenic	Intergenic	-173666	NM_019707	12554	Mm.334841	NM_019707	ENSMUSG00000031841	Cdh13	4932416G01Rik|Cdht|T-cadherin|Tcad	cadherin 13	protein-coding
common_peak2-32367-13-32--1.26592208872068-1.87214134458702	chrX	103165022	103165569	+	0	NA	3' UTR (NM_025952, exon 11 of 11)	3' UTR (NM_025952, exon 11 of 11)	-40584	NM_009530	22589	Mm.10141	NM_009530	ENSMUSG00000031229	Atrx	4833408C14Rik|AI447451|ATR2|DXHXS6677E|HP1-BP38|Hp1bp2|Hp1bp38|MRXS3|RAD54L|Rad54|XH2|Xnp|ZNF-HX	alpha thalassemia/mental retardation syndrome X-linked homolog (human)	protein-coding
common_peak2-19840-36-42-0.0530563314656565-0.323497957212832	chr1	91022544	91024122	+	0	NA	intron (NM_133816, intron 2 of 5)	intron (NM_133816, intron 2 of 5)	56296	NM_133816	98402	Mm.170983	NM_133816		Sh3bp4	AI594717|AW227605|BOG25	SH3-domain binding protein 4	protein-coding
common_peak1-17103-15-12-0.311725032414564-0.425539671739611	chr6	113471296	113472080	+	0	NA	intron (NM_175101, intron 3 of 7)	intron (NM_175101, intron 3 of 7)	9944	NM_175101	66087	Mm.275989	NM_175101	ENSMUSG00000030286	Emc3	0610039A15Rik|AI225901|AW260416|Pob|Tmem111	ER membrane protein complex subunit 3	protein-coding
unique_peak2-37793-3-11--1.99894559068043-1.95434855131066	chr5	121836503	121836984	+	0	NA	Intergenic	Intergenic	-1119	NM_172275	231712	Mm.20488	NM_172275	ENSMUSG00000042726	Trafd1	1110008K06Rik|Fln29	TRAF type zinc finger domain containing 1	protein-coding
common_peak1-8660-60-79-0.0323637667331687-0.313169363846758	chr10	128058806	128060290	+	0	NA	Intergenic	Intergenic	4014	NM_013765	27370	Mm.261679	NM_013765	ENSMUSG00000025362	Rps26	-	ribosomal protein S26	protein-coding
unique_peak2-39601-3-6--1.22133801201688-1.08602067057793	chr9	77950975	77951380	+	0	NA	intron (NM_001081490, intron 2 of 12)	intron (NM_001081490, intron 2 of 12)	5286	NM_023605	71538	Mm.28584	NM_023605	ENSMUSG00000001366	Fbxo9	9030401P18Rik|AA986398	f-box protein 9	protein-coding
unique_peak2-37091-1-6--2.43441193227435-1.56314192529759	chr3	152509996	152510442	+	0	NA	intron (NM_012028, intron 2 of 4)	intron (NM_012028, intron 2 of 4)	133155	NM_025662	329777	Mm.331447	NM_025662	ENSMUSG00000039047	Pigk	3000001O05Rik	phosphatidylinositol glycan anchor biosynthesis, class K	protein-coding
common_peak2-25174-11-12--0.191746133889479-0.310474156842889	chr18	54907027	54907532	+	0	NA	Intergenic	Intergenic	135881	NR_045400	328957	Mm.402781	NR_045400		9330117O12Rik	9330117O12	RIKEN cDNA 9330117O12 gene	ncRNA
common_peak2-20603-15-22--0.511397205501357-0.50761186003982	chr10	79916470	79917271	+	0	NA	Intergenic	B1_Mur4|SINE|Alu	-20472	NM_001164148	21423	Mm.3406	NM_011548	ENSMUSG00000020167	Tcf3	A1|AA408400|ALF2|AW209082|E12|E12/E47|E2A|E47|ME2|Pan1|Pan2|TCF-3|Tcfe2a|VDIR|bHLHb21	transcription factor 3	protein-coding
common_peak2-20490-26-49--0.715957097616262-1.30310500416066	chr10	56378515	56379692	+	0	NA	Intergenic	Intergenic	281997	NM_010288	14609	Mm.378921	NM_010288	ENSMUSG00000050953	Gja1	AU042049|AW546267|Cnx43|Cx43|Cx43alpha1|Gja-1|Npm1|connexin43	gap junction protein, alpha 1	protein-coding
common_peak2-21901-6-7--0.434601889619698-0.97990265578305	chr12	8071525	8071992	+	0	NA	Intergenic	MLT1B|LTR|MaLR	87275	NM_009693	238055	Mm.221239	NM_009693	ENSMUSG00000020609	Apob	AI315052|Apo B-100|apob-100|apob-48	apolipoprotein B	protein-coding
unique_peak2-38889-6-10--0.894033508256995-1.21398586181642	chr8	5094082	5094490	+	0	NA	intron (NM_011388, intron 2 of 5)	RLTR13C1|LTR|ERVK	10946	NM_011388	20494	Mm.3500	NM_011388	ENSMUSG00000023073	Slc10a2	ASBT|ISBT	solute carrier family 10, member 2	protein-coding
common_peak1-10556-15-12-0.311725032414564-0.425539671739611	chr14	20660255	20660991	+	0	NA	intron (NR_105025, intron 1 of 2)	intron (NR_105025, intron 1 of 2)	2476	NR_105025	52512	Mm.483998	NR_105025		D14Ertd670e	-	DNA segment, Chr 14, ERATO Doi 670, expressed	ncRNA
common_peak1-19492-47-70--0.214905694738134-0.4354024333952	chrX	155262130	155263106	+	0	NA	Intergenic	Lx4B|LINE|L1	-431096	NM_148945	110651	Mm.328476	NM_148945	ENSMUSG00000031309	Rps6ka3	C130006E23|MAPKAPK-1b|MPK-9|Rsk2|S6K-alpha3|p90RSK3|pp90RSK2	ribosomal protein S6 kinase polypeptide 3	protein-coding
common_peak1-15766-39-47-0.0307987461979975-0.310078451983505	chr4	151933555	151934715	+	0	NA	intron (NM_153424, intron 25 of 29)	intron (NM_153424, intron 25 of 29)	81884	NM_153424	260305	Mm.302496	NM_153424	ENSMUSG00000039577	Nphp4	4930564O18Rik|nmf192	nephronophthisis 4 (juvenile) homolog (human)	protein-coding
unique_peak2-37480-3-6--1.22133801201688-1.08602067057793	chr5	4103436	4103832	+	0	NA	intron (NM_020010, intron 1 of 9)	intron (NM_020010, intron 1 of 9)	1063	NM_020010	13121	Mm.140158	NM_020010	ENSMUSG00000001467	Cyp51	AI426508|CYPLI|Cyp51a1|Ldm|P450-14DM|P450LI	cytochrome P450, family 51	protein-coding
common_peak1-14778-94-150--0.108815171475762-0.375923200826777	chr3	88949636	88951485	+	0	NA	TTS (NM_001099779)	TTS (NM_001099779)	10015	NM_001099779	18770	Mm.383180	NM_013631	ENSMUSG00000041237	Pklr	Pk-1|Pk1|R-PK	pyruvate kinase liver and red blood cell	protein-coding
common_peak1-14843-82-171--0.533001610396363-2.33673263029076	chr3	94657476	94659916	+	0	NA	intron (NM_172683, intron 2 of 18)	intron (NM_172683, intron 2 of 18)	17207	NM_172683	229584	Mm.274787	NM_172683	ENSMUSG00000038902	Pogz	9530006B08Rik	pogo transposable element with ZNF domain	protein-coding
unique_peak1-5710-10-3-1.35641534500877-1.75805390616669	chr6	38837251	38837760	+	0	NA	Intergenic	Intergenic	-11316	NM_001294143	15258	Mm.23790	NM_010433	ENSMUSG00000061436	Hipk2	1110014O20Rik|B230339E18Rik|Stank	homeodomain interacting protein kinase 2	protein-coding
unique_peak2-34509-1-7--2.62705701021674-1.80617997398389	chr14	50925045	50925345	+	0	NA	Intergenic	ORR1D1-int|LTR|MaLR	-6190	NM_146663	258657	Mm.377620	NM_146663	ENSMUSG00000090874	Olfr733	MOR241-2	olfactory receptor 733	protein-coding
common_peak2-29575-36-65--0.565073033190699-1.09506545297322	chr6	47877321	47878505	+	0	NA	intron (NM_145576, intron 3 of 4)	RSINE1|SINE|B4	7346	NM_001145881	232784	Mm.196782	NM_145576	ENSMUSG00000052763	Zfp212	Znf212|mKIAA3011	Zinc finger protein 212	protein-coding
common_peak2-31593-9-9--0.132314688483142-1.03275496310833	chr8	121618871	121619337	+	0	NA	exon (NM_019707, exon 7 of 14)	exon (NM_019707, exon 7 of 14)	-249334	NM_024219	68196	Mm.358714	NM_024219	ENSMUSG00000031839	Hsbp1	0610007A03Rik|AA408769|Hsp25	heat shock factor binding protein 1	protein-coding
unique_peak2-36805-6-6--0.241956811677302-0.947717972411649	chr3	84228202	84228591	+	0	NA	Intergenic	B4A|SINE|B4	-44553	NR_040752	75309	Mm.159497	NR_040752		4930565D16Rik	-	RIKEN cDNA 4930565D16 gene	ncRNA
unique_peak2-37633-3-9--1.73591118484664-1.57096726280955	chr5	72916529	72916876	+	0	NA	intron (NM_133921, intron 15 of 22)	B1_Mus1|SINE|Alu	-20923	NM_001122756	53419	Mm.332425	NM_016869	ENSMUSG00000005220	Corin	AV273130|Lrp4	corin	protein-coding
unique_peak1-6129-8-2-1.42025991722641-1.65811743852845	chr6	131322957	131323405	+	0	NA	intron (NM_011733, intron 5 of 8)	intron (NM_011733, intron 5 of 8)	15287	NM_139117	56449	Mm.458000	NM_011733	ENSMUSG00000030189	Ybx3	Csda|Dpba|MSY3|MSY4|Yb2|dbpA|oxyR	Y box protein 3	protein-coding
unique_peak2-37166-4-6--0.830815435910851-0.989110657569874	chr4	45012801	45013203	+	0	NA	intron (NM_173399, intron 1 of 1)	intron (NM_173399, intron 1 of 1)	12282	NM_001163284	230119	Mm.44222	NM_173399	ENSMUSG00000049657	Zbtb5	5930421I10|9430083K24Rik|AI646847|mKIAA0354	zinc finger and BTB domain containing 5	protein-coding
unique_peak2-36318-7-5-0.214128329577033-1.01466476204226	chr2	79566616	79566973	+	0	NA	intron (NM_001290744, intron 2 of 2)	intron (NM_001290744, intron 2 of 2)	18857	NM_001290743	75276	Mm.257373	NM_172420	ENSMUSG00000034683	Ppp1r1c	4930565M23Rik|4930579P15Rik	protein phosphatase 1, regulatory (inhibitor) subunit 1C	protein-coding
common_peak1-19482-39-52--0.112159207644045-0.320382596085891	chrX	142389789	142391456	+	0	NA	Intergenic	Lx9|LINE|L1	-468440	NM_153319	27494	Mm.100068	NM_153319	ENSMUSG00000041688	Amot	CAG-2|D0Kist1|Sii6	angiomotin	protein-coding
common_peak2-21227-45-40-0.502806020726788-1.02303743263849	chr11	62879479	62880298	+	0	NA	intron (NM_027660, intron 1 of 7)	MTD|LTR|MaLR	4727	NM_027660	71062	Mm.23534	NM_027660	ENSMUSG00000042189	Tekt3	4933407G07Rik	tektin 3	protein-coding
common_peak1-19290-10-11--0.228547155712387-0.31137425193576	chr9	120110229	120110723	+	0	NA	Intergenic	(TCTCTG)n|Simple_repeat|Simple_repeat	51616	NM_001039364	17433	Mm.486167	NM_008614	ENSMUSG00000032517	Mobp	AI835053|AI839848|MOBP155|MOBP170|MOBP69|MOBP73|MOBP81|R74645	myelin-associated oligodendrocytic basic protein	protein-coding
unique_peak1-4080-18-1-3.31291915122835-4.8766546284749	chr2	71531199	71532028	+	0	NA	Intergenic	Intergenic	-25861	NR_037979	381371	Mm.330284	NM_201366	ENSMUSG00000064263	Gm1631	-	predicted gene 1631	ncRNA
common_peak2-29477-25-28-0.00386891021753399-0.304839791830758	chr6	30896047	30896771	+	0	NA	Intergenic	L2a|LINE|L2	12581	NM_001135093	619665	Mm.204671	NM_001135093	ENSMUSG00000073209	Klf14	5330411L03Rik|AL022736|BTEB5	Kruppel-like factor 14	protein-coding
common_peak2-32030-7-7--0.200909169701811-0.97990265578305	chr9	77544963	77545358	+	0	NA	Intergenic	L1Md_A|LINE|L1	-57182	NM_010295	14629	Mm.89888	NM_010295	ENSMUSG00000032350	Gclc	D9Wsu168e|GLCL-H|Ggcs-hs|Glclc	glutamate-cysteine ligase, catalytic subunit	protein-coding
common_peak2-25003-11-7-0.508693584251613-1.21681515183528	chr18	12224972	12225490	+	0	NA	intron (NR_110356, intron 9 of 15)	RLTR23|LTR|ERV1	54815	NR_110356	338363	Mm.271567	NM_178801	ENSMUSG00000049411	Tmem241	6030446N20Rik	transmembrane protein 241	protein-coding
unique_peak1-5942-9-0-3.18961340640422-3.01029995663981	chr6	90797504	90798013	+	0	NA	Intergenic	Intergenic	-37641	NM_001134384	232227	Mm.196943	NM_182784	ENSMUSG00000034312	Iqsec1	AW561907|BC026481|BRAG2|D6Ertd349e|cI-43	IQ motif and Sec7 domain 1	protein-coding
common_peak2-24940-29-16-1.02482723936477-1.87578206828671	chr18	37879696	37880282	+	0	NA	promoter-TSS (NM_033576)	promoter-TSS (NM_033576)	-219	NM_033576	93701	Mm.247203	NM_033576		Pcdhgb4	-	protocadherin gamma subfamily B, 4	protein-coding
common_peak2-24605-17-9-0.896368243317676-1.09394599973099	chr17	32946800	32947365	+	0	NA	promoter-TSS (NM_183177)	promoter-TSS (NM_183177)	-206	NM_183177	240063	Mm.30675	NM_183177		Zfp811	BC052046	zinc finger protein 811	protein-coding
common_peak2-30284-19-19-0.0807592317743238-0.322753776620787	chr7	18947693	18948760	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-7870	NM_011963	26438	Mm.89991	NM_011963	ENSMUSG00000003505	Psg18	Cea-3|Cea3|mmCGM6	pregnancy specific glycoprotein 18	protein-coding
common_peak1-19390-10-12--0.344024373132323-0.340565874754526	chrX	47891921	47892601	+	0	NA	Intergenic	L1_Mus3|LINE|L1	96174	NR_015505	103012	Mm.482523	NR_015505		Firre	5830467J12Rik|6720401G13Rik|AW048145	functional intergenic repeating RNA element	ncRNA
common_peak2-28646-22-31--0.352715894912595-0.440892966163086	chr5	30278573	30279711	+	0	NA	intron (NR_105781, intron 2 of 2)	intron (NR_105781, intron 2 of 2)	-60559	NM_031168	16193	Mm.1019	NM_031168	ENSMUSG00000025746	Il6	Il-6	interleukin 6	protein-coding
unique_peak1-6894-9-1-2.18961340640422-2.31132995230379	chr8	94809729	94810258	+	0	NA	Intergenic	RSINE1|SINE|B4	70026	NR_110452	71296	Mm.86664	NR_033641	ENSMUSG00000031736	Crnde	4933436C20Rik	colorectal neoplasia differentially expressed (non-protein coding)	ncRNA
common_peak2-27499-13-14--0.12841856497075-0.301029995663977	chr3	94987696	94988363	+	0	NA	3' UTR (NM_029885, exon 10 of 10)	3' UTR (NM_029885, exon 10 of 10)	19768	NM_011351	20360	Mm.23662	NM_011351	ENSMUSG00000038777	Sema6c	Semay|mKIAA1869	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	protein-coding
unique_peak1-2643-10-2-1.77145284428761-2.09384600808989	chr16	45657616	45658111	+	0	NA	intron (NM_172455, intron 17 of 17)	intron (NM_172455, intron 17 of 17)	-3632	NM_145389	212998	Mm.97511	NM_145389	ENSMUSG00000033187	BC016579	-	cDNA sequence, BC016579	protein-coding
unique_peak1-6866-20-14-0.581184188982674-0.690311289528838	chr8	88054324	88055294	+	0	NA	Intergenic	RSINE1|SINE|B4	24361	NM_019794	56445	Mm.475573	NM_019794	ENSMUSG00000031701	Dnaja2	1500017M13Rik|2010206B19Rik|DNAJ|DNJ3|Dnaj3|HIRIP4|PRO3015|mDj3	DnaJ (Hsp40) homolog, subfamily A, member 2	protein-coding
unique_peak2-34138-4-15--2.02346051385325-2.4322161449009	chr13	23581551	23581957	+	0	NA	Intergenic	Intergenic	-1028	NM_001289614	238555	Mm.129668	NM_175938		Btn2a2	Btn2|D030063K05	butyrophilin, subfamily 2, member A2	protein-coding
unique_peak2-36378-10-14--0.550475250599749-0.446472590016315	chr2	118901378	118901886	+	0	NA	intron (NM_029617, intron 8 of 23)	PB1D9|SINE|Alu	28777	NM_029617	76464	Mm.202518	NM_029617	ENSMUSG00000027326	Casc5	2310043D08Rik|5730505K17Rik	cancer susceptibility candidate 5	protein-coding
common_peak1-13268-89-170--0.382885760059896-1.40139988198718	chr19	36347607	36349598	+	0	NA	Intergenic	HERV16-int|LTR|ERVL	-104955	NM_029508	76073	Mm.259180	NM_029508	ENSMUSG00000024805	Pcgf5	0610009F02Rik|1110054A01Rik|5830406C17Rik|5830443C21Rik|9530023M17Rik|AI324127	polycomb group ring finger 5	protein-coding
common_peak2-24470-27-24-0.347689761120511-0.550049347815233	chr17	24426568	24427528	+	0	NA	intron (NM_001031621, intron 18 of 29)	B1_Mur1|SINE|Alu	-38694	NM_007634	12449	Mm.77695	NM_007634	ENSMUSG00000072082	Ccnf	CycF|Fbxo1	cyclin F	protein-coding
unique_peak2-36760-8-12--0.695217300193522-0.475924844171029	chr3	63893536	63893968	+	0	NA	exon (NM_019918, exon 3 of 6)	exon (NM_019918, exon 3 of 6)	8188	NM_019918	56544	Mm.57069	NM_019918	ENSMUSG00000027824	Vmn2r1	Casrl1|EG56544|V2r83	vomeronasal 2, receptor 1	protein-coding
common_peak2-29387-8-15--0.994777582052429-0.771068449301683	chr6	40435624	40436174	+	0	NA	Intergenic	Intergenic	-5338	NM_001025385	574417	Mm.386354	NM_001025385	ENSMUSG00000052850	Tas2r137	T2R37|Tas2r3|mt2r41	taste receptor, type 2, member 137	protein-coding
unique_peak1-1296-10-4-1.03448725012141-1.5150158574804	chr11	119975415	119975944	+	0	NA	intron (NM_024249, intron 11 of 16)	intron (NM_024249, intron 11 of 16)	15431	NM_001110242	208501	Mm.46699	NM_001110242		1810043H04Rik	-	RIKEN cDNA 1810043H04 gene	protein-coding
unique_peak1-5122-13-0-3.77847203063777-4.51544993495972	chr5	66502634	66503177	+	0	NA	intron (NM_001127382, intron 2 of 7)	intron (NM_001127382, intron 2 of 7)	-13487	NM_139065	245945	Mm.36863	NM_139065	ENSMUSG00000070780	Rbm47	9530077J19Rik	RNA binding motif protein 47	protein-coding
unique_peak1-1876-14-2-2.31425365963649-3.28500101358144	chr14	57895688	57896362	+	0	NA	intron (NM_030004, intron 6 of 7)	intron (NM_030004, intron 6 of 7)	121295	NM_030004	68631	Mm.25539	NM_030004	ENSMUSG00000021947	Cryl1	1110025H08Rik|A230106J09Rik|C85932|gul3dh	crystallin, lambda 1	protein-coding
common_peak2-27217-16-24--0.525592547506663-0.561823156887258	chr3	51223366	51224372	+	0	NA	intron (NM_053089, intron 1 of 19)	intron (NM_053089, intron 1 of 19)	3931	NM_053089	74838	Mm.275281	NM_053089	ENSMUSG00000063273	Naa15	5730450D16Rik|6330400I15|ASTBDN|Narg1|Tbdn-1|mNAT1	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	protein-coding
common_peak2-27010-3-7--1.41398308995928-1.23214870625617	chr2	173256863	173257313	+	0	NA	Intergenic	Intergenic	-91005	NM_028158	72221	Mm.46132	NM_028158	ENSMUSG00000027518	1700021F07Rik	-	RIKEN cDNA 1700021F07 gene	protein-coding
common_peak1-19310-13-27--1.02888289141984-1.21173582416604	chr9	122351836	122352475	+	0	NA	Intergenic	Intergenic	-44236	NR_045967	654800	Mm.393956	NR_045967		A730085K08Rik	-	RIKEN cDNA A730085K08 gene	ncRNA
unique_peak1-5306-7-0-2.79909083029819-2.40823996531185	chr5	75028037	75028474	+	0	NA	intron (NM_001159577, intron 2 of 10)	B3A|SINE|B2	45642	NM_010727	16924	Mm.440403	NM_010727	ENSMUSG00000029228	Lnx1	Lnx	ligand of numb-protein X 1	protein-coding
common_peak1-7937-48-34-0.841644134289848-2.21281914625673	chr1	151676516	151677652	+	0	NA	3' UTR (NM_008869, exon 18 of 18)	3' UTR (NM_008869, exon 18 of 18)	131330	NM_008869	18783	Mm.4186	NM_008869	ENSMUSG00000056220	Pla2g4a	Pla2g4|cPLA2|cPLA2alpha	phospholipase A2, group IVA (cytosolic, calcium-dependent)	protein-coding
common_peak2-30760-18-24--0.330937038546373-0.380101753845076	chr7	122067249	122068058	+	0	NA	Intergenic	RMER17C|LTR|ERVK	-24511	NR_040317	101786	Mm.395157	NR_040317		A730082K24Rik	AU044236	RIKEN cDNA A730082K24 gene	ncRNA
unique_peak1-4023-6-1-1.5653981103803-1.56314192529759	chr2	43734691	43735091	+	0	NA	intron (NM_001025377, intron 5 of 5)	intron (NM_001025377, intron 5 of 5)	130544	NM_001025377	76117	Mm.217350	NM_153820	ENSMUSG00000049744	Arhgap15	5830480G12Rik	Rho GTPase activating protein 15	protein-coding
common_peak2-25723-76-87-0.302512767225984-0.838382413282768	chr19	23686903	23688105	+	0	NA	intron (NM_026188, intron 2 of 5)	intron (NM_026188, intron 2 of 5)	39798	NM_026188	67483	Mm.443287	NM_026188	ENSMUSG00000033053	1700028P14Rik	AV209940	RIKEN cDNA 1700028P14 gene	protein-coding
common_peak1-16576-17-10-0.75886471956774-0.917676348953458	chr5	146916103	146916985	+	0	NA	intron (NM_001105160, intron 11 of 12)	intron (NM_001105160, intron 11 of 12)	25710	NM_001105160	100041449	Mm.301900	NM_001105160	ENSMUSG00000061292	Cyp3a59	ENSMUSG00000061292	cytochrome P450, family 3, subfamily a, polypeptide 59	protein-coding
common_peak1-14043-35-40-0.0738182538444203-0.324581211600972	chr2	118761531	118762970	+	0	NA	Intergenic	(GA)n|Simple_repeat|Simple_repeat	10017	NM_028117	72136	Mm.486238	NM_028117	ENSMUSG00000074916	Chst14	2600016L03Rik|D4ST-1|D4st1	carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	protein-coding
unique_peak1-3431-9-5-0.604650905683064-1.21398586181642	chr19	6531129	6531611	+	0	NA	exon (NM_001205234, exon 23 of 23)	exon (NM_001205234, exon 23 of 23)	11700	NM_009203	20521	Mm.391146	NM_009203	ENSMUSG00000061742	Slc22a12	AI987855|OAT4L|Rst|Slc22al2|URAT1	solute carrier family 22 (organic anion/cation transporter), member 12	protein-coding
common_peak1-9716-13-28--1.0795089644898-1.33403699391683	chr12	31350916	31351528	+	0	NA	Intergenic	L1_Mus4|LINE|L1	81914	NM_172049	211986	Mm.34035	NM_172049	ENSMUSG00000043061	Tmem18	BC024093	transmembrane protein 18	protein-coding
common_peak1-14780-23-44--0.770085591820594-1.3174917037782	chr3	89164548	89165456	+	0	NA	intron (NM_029974, intron 3 of 15)	intron (NM_029974, intron 3 of 15)	4159	NM_029974	77772	Mm.164013	NM_029974	ENSMUSG00000042672	Dcst1	A330106H01Rik	DC-STAMP domain containing 1	protein-coding
unique_peak1-5507-17-8-1.04837133676273-1.30305656033811	chr5	136522402	136523218	+	0	NA	Intergenic	B3|SINE|B2	8444	NM_175309	100647	Mm.3089	NM_175309	ENSMUSG00000042985	Upk3b	AI447729|AI957187|P35|PMS2L14|UpIIIb	uroplakin 3B	protein-coding
common_peak2-29359-27-42--0.434718803806862-0.595371917655149	chr5	150673672	150674643	+	0	NA	Intergenic	Intergenic	23835	NR_045758	70969	Mm.78499	NR_045758		4930500F04Rik	4931407C17Rik	RIKEN cDNA 4930500F04 gene	ncRNA
common_peak2-20995-15-33--1.07529809069468-1.60877160026698	chr11	23254870	23255620	+	0	NA	intron (NM_001190401, intron 10 of 79)	intron (NM_001190401, intron 10 of 79)	48350	NM_001190401	17847	Mm.119155	NM_001190401	ENSMUSG00000056342	Usp34	A530081C03Rik|Murr2	ubiquitin specific peptidase 34	protein-coding
common_peak1-10487-17-16-0.130833496954699-0.356936432242225	chr13	119462126	119462904	+	0	NA	Intergenic	Intergenic	-40991	NM_008002	14165	Mm.317323	NM_008002	ENSMUSG00000021732	Fgf10	AEY17|BB213776|Fgf-10|Gsfaey17	fibroblast growth factor 10	protein-coding
unique_peak2-37996-8-20--1.38709500483119-1.45476480588849	chr6	28215256	28215919	+	0	NA	Intergenic	Intergenic	-3986	NM_001081678	627049	Mm.84441	NM_001081678	ENSMUSG00000039841	Zfp800	AA407452|Znf800	zinc finger protein 800	protein-coding
common_peak1-7519-13-26--0.9764154715257-1.09492971584134	chr1	23256561	23257193	+	0	NA	Intergenic	Intergenic	-22231	NR_029533	387225		NR_029533	miRBase:MI0000144	Mir30a	Mirn30a|mmu-mir-30a	microRNA 30a	ncRNA
unique_peak2-36351-8-8--0.164702583494742-1.00793137938329	chr2	93461973	93462616	+	0	NA	Intergenic	Intergenic	-20297	NM_007442	11695	Mm.389389	NM_007442	ENSMUSG00000040310	Alx4	lst	aristaless-like homeobox 4	protein-coding
common_peak1-7829-37-34-0.396710054540852-0.69337412621609	chr1	127290360	127291878	+	0	NA	intron (NM_001205385, intron 12 of 12)	intron (NM_001205385, intron 12 of 12)	41185	NM_023735	74117	Mm.183102	NM_023735	ENSMUSG00000026341	Actr3	1200003A09Rik|Arp3	ARP3 actin-related protein 3	protein-coding
common_peak2-22606-13-7-0.778472030637769-0.817533494790411	chr13	74390493	74390911	+	0	NA	intron (NM_009644, intron 4 of 10)	Lx9|LINE|L1	39055	NM_009644	11624	Mm.290446	NM_009644	ENSMUSG00000021575	Ahrr	mKIAA1234	aryl-hydrocarbon receptor repressor	protein-coding
common_peak1-11518-21-44--0.922363831063439-1.59745120326141	chr16	58408440	58409101	+	0	NA	5' UTR (NM_028523, exon 1 of 16)	5' UTR (NM_028523, exon 1 of 16)	122	NM_028523	73379	Mm.373589	NM_028523	ENSMUSG00000035107	Dcbld2	1700055P21Rik|AW146002|CLCP1|Esdn	discoidin, CUB and LCCL domain containing 2	protein-coding
common_peak2-25547-12-22--0.874785970969374-0.809260849721102	chr19	6117864	6118702	+	0	NA	exon (NM_133678, exon 1 of 2)	exon (NM_133678, exon 1 of 2)	303	NM_133678	66406	Mm.303924	NM_133678	ENSMUSG00000024790	Sac3d1	2410004C24Rik|AU015683|shd1	SAC3 domain containing 1	protein-coding
common_peak1-9544-11-26--1.24619391791185-1.66030262873422	chr11	116434382	116434944	+	0	NA	intron (NM_173755, intron 1 of 17)	intron (NM_173755, intron 1 of 17)	8098	NM_173755	217342	Mm.243950	NM_173755	ENSMUSG00000020802	Ube2o	9630022H21|B230113M03Rik|E2-230K|mKIAA1734	ubiquitin-conjugating enzyme E2O	protein-coding
unique_peak2-33872-7-9--0.522837264589173-1.05908390183068	chr12	24650575	24651228	+	0	NA	Intergenic	Intergenic	131233	NM_001256489	66808	Mm.379124	NM_001256489		9030624G23Rik	-	RIKEN cDNA 9030624G23 gene	protein-coding
common_peak2-22358-21-17-0.399564263823923-0.561823156887258	chr13	24937178	24937725	+	0	NA	intron (NM_001081051, intron 1 of 20)	intron (NM_001081051, intron 1 of 20)	451	NM_001081051	210108	Mm.261514	NM_001081051	ENSMUSG00000006711	D130043K22Rik	4930451E12Rik|Kiaa0319	RIKEN cDNA D130043K22 gene	protein-coding
unique_peak1-6248-8-1-2.00522241794757-2.05605744720049	chr7	19322116	19322541	+	0	NA	Intergenic	Intergenic	18889	NM_001004152	243862	Mm.389833	NM_001004152	ENSMUSG00000044903	Psg22	AA408604|cea9	pregnancy-specific glycoprotein 22	protein-coding
common_peak1-11527-20-24--0.155781405183531-0.319918318021793	chr16	4003201	4004325	+	0	NA	Intergenic	CpG	-2085	NM_177472	52864	Mm.29935	NM_177472	ENSMUSG00000039738	Slx4	AI256635|AI426760|Btbd12|D16Bwg1016e	SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae)	protein-coding
common_peak1-14649-58-47-0.710987434169341-2.08526029943626	chr3	57344474	57346404	+	0	NA	intron (NM_133784, intron 2 of 6)	intron (NM_133784, intron 2 of 6)	34359	NM_133784	97064	Mm.405029	NM_133784	ENSMUSG00000027803	Wwtr1	2310058J06Rik|2610021I22Rik|C78399|Taz	WW domain containing transcription regulator 1	protein-coding
common_peak2-26947-64-70-0.315699282203921-0.747287521987093	chr2	164558352	164560093	+	0	NA	intron (NM_027961, intron 2 of 3)	(TG)n|Simple_repeat|Simple_repeat	9545	NM_027961	71856	Mm.330770	NM_027961	ENSMUSG00000076434	Wfdc3	1700015L13Rik|1700127F16Rik	WAP four-disulfide core domain 3	protein-coding
common_peak1-13728-28-23-0.467996619100306-0.690880484874617	chr2	31974068	31975104	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	23415	NM_145521	227721	Mm.257236	NM_145521	ENSMUSG00000051373	Ppapdc3	D830019K17Rik|NET39	phosphatidic acid phosphatase type 2 domain containing 3	protein-coding
unique_peak2-37913-0-6--3.64748585253182-1.56314192529759	chr5	144223741	144224096	+	0	NA	Intergenic	RLTR11B|LTR|ERVK	-1443	NM_144915	231871	Mm.469963	NM_144915	ENSMUSG00000039206	Daglb	E330036I19Rik	diacylglycerol lipase, beta	protein-coding
unique_peak2-36524-4-10--1.48289213249054-1.5150158574804	chr2	163472160	163472613	+	0	NA	TTS (NR_028113)	TTS (NR_028113)	-1507	NM_012032	26943	Mm.218473	NM_012032	ENSMUSG00000017707	Serinc3	AA959945|AA960047|AIGP1|DIFF33|TMS-1|Tde1	serine incorporator 3	protein-coding
common_peak2-26544-8-4-0.683294323060208-1.21878474469819	chr2	92748552	92748938	+	0	NA	Intergenic	RMER4B|LTR|ERVK	-6513	NM_030725	80976	Mm.33490	NM_030725	ENSMUSG00000027220	Syt13	5730409J20Rik|AI549909|mKIAA1427	synaptotagmin XIII	protein-coding
unique_peak1-6839-12-7-0.648775985087639-0.697979855752659	chr8	82473070	82473795	+	0	NA	Intergenic	Intergenic	108475	NM_020259	15245	Mm.254493	NM_020259		Hhip	Hhip1	Hedgehog-interacting protein	protein-coding
unique_peak1-2164-11-0-3.50869358425161-3.61235994796777	chr15	60468136	60468772	+	0	NA	Intergenic	Intergenic	-186066	NR_030696	320469	Mm.230853	NM_177166	ENSMUSG00000097493	9930014A18Rik	-	RIKEN cDNA 9930014A18 gene	ncRNA
common_peak1-16216-24-41--0.599107520011044-0.83607543869935	chr5	98030476	98031598	+	0	NA	Intergenic	Intergenic	-145010	NM_010294	14626	Mm.61206	NM_010294	ENSMUSG00000050553	Gk2	GKTA|Gk-rs2	glycerol kinase 2	protein-coding
common_peak2-26133-27-41--0.400771471883525-0.542588322087496	chr2	11602513	11603367	+	0	NA	intron (NM_008367, intron 4 of 7)	MTC|LTR|MaLR	-23980	NM_001271498	16169	Mm.200196	NM_008358	ENSMUSG00000023206	Il15ra	AA690181|IL-15RA	interleukin 15 receptor, alpha chain	protein-coding
common_peak1-9904-14-20--0.493101262421116-0.456667090758524	chr12	86826165	86826821	+	0	NA	Intergenic	ID_B1|SINE|B4	11642	NM_010234	14281	Mm.246513	NM_010234	ENSMUSG00000021250	Fos	D12Rfj1|c-fos|cFos	FBJ osteosarcoma oncogene	protein-coding
unique_peak2-36931-2-7--1.91745425626332-1.45399745587252	chr3	102651048	102651423	+	0	NA	intron (NM_011516, intron 28 of 32)	L1_Mus1|LINE|L1	-64598	NM_001165940	22094	Mm.110730	NM_009432	ENSMUSG00000027857	Tshb	-	thyroid stimulating hormone, beta subunit	protein-coding
unique_peak2-33183-2-10--2.37688587490062-2.09384600808989	chr10	96160768	96161301	+	0	NA	Intergenic	Intergenic	81399	NM_007569	12226	Mm.23811	NM_007569	ENSMUSG00000036478	Btg1	AI426953|AW546738	B cell translocation gene 1, anti-proliferative	protein-coding
common_peak2-26423-52-88--0.367473440700699-0.801556296744837	chr2	60880703	60882037	+	0	NA	Intergenic	Intergenic	-68162	NR_045335	100038493	Mm.388076	NR_045335	ENSMUSG00000075325	Gm13582	ENSMUSG00000075325|OTTMUSG00000012844	predicted gene 13582	ncRNA
common_peak2-21621-36-14-1.57243049055924-4.02188667233815	chr11	100962407	100963195	+	0	NA	intron (NM_026501, intron 5 of 8)	B1_Mur4|SINE|Alu	-6052	NM_008949	19183	Mm.18344	NM_008949		Psmc3ip	C79099|GT198|HOP2|Tbpip	proteasome (prosome, macropain) 26S subunit, ATPase 3, interacting protein	protein-coding
common_peak1-16777-13-25--0.921967687503323-0.983972868822056	chr6	38298696	38299382	+	0	NA	intron (NM_028421, intron 1 of 11)	B2_Mm1a|SINE|B2	5564	NM_028864	78781	Mm.25243	NM_028421	ENSMUSG00000029826	Zc3hav1	1200014N16Rik|2900058M19Rik|9130009D18Rik|9830115L13Rik|ARTD13|D6Bwg1452e|ZAP	zinc finger CCCH type, antiviral 1	protein-coding
common_peak2-31300-110-152-0.144609917685992-0.496621649154246	chr8	74993484	74994437	+	0	NA	promoter-TSS (NR_106036)	promoter-TSS (NR_106036)	28	NR_106036	102465647		NR_106036		Mir7068	mmu-mir-7068	microRNA mir-7068	ncRNA
unique_peak2-38161-7-6--0.00826409175941478-0.97990265578305	chr6	87223989	87224493	+	0	NA	intron (NM_054041, intron 8 of 17)	RLTR42|LTR|ERVK	61528	NM_054041	69538	Mm.232525	NM_054041	ENSMUSG00000033420	Antxr1	2310008J16Rik|2810405N18Rik|Antrx1|Tem8	anthrax toxin receptor 1	protein-coding
unique_peak2-34348-3-6--1.22133801201688-1.08602067057793	chr13	100461555	100461954	+	0	NA	Intergenic	L1VL4|LINE|L1	-175197	NM_008634	17755	Mm.4173	NM_008634	ENSMUSG00000052727	Map1b	A230055D22|AI843217|LC1|MAP5|Mtap-5|Mtap1b|Mtap5	microtubule-associated protein 1B	protein-coding
common_peak2-26930-15-25--0.688274967585436-0.73354163167379	chr2	163583192	163584364	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-7803	NM_001272052	11486	Mm.388	NM_007398	ENSMUSG00000017697	Ada	-	adenosine deaminase	protein-coding
common_peak2-20278-49-62-0.0290038995252671-0.307923848373175	chr1	191223882	191225436	+	0	NA	intron (NM_001281848, intron 1 of 5)	intron (NM_001281848, intron 1 of 5)	1493	NM_001281848	16526	Mm.33304	NM_010607	ENSMUSG00000037624	Kcnk2	A430027H14Rik|AI848635|TREK-1	potassium channel, subfamily K, member 2	protein-coding
unique_peak1-209-16-2-2.53330114154691-3.78760380288747	chr1	86469090	86469757	+	0	NA	Intergenic	Intergenic	1025962	NM_030194	109032	Mm.335802	NM_030194	ENSMUSG00000070034	Sp110	5031415C07Rik|52kDa|5830484A20Rik|ENSMUSG00000075603|Ifi75|Ipr1	Sp110 nuclear body protein	protein-coding
unique_peak2-33850-3-8--1.58390809140159-1.39487600375387	chr12	17184501	17185072	+	0	NA	Intergenic	Intergenic	-1092	NM_201531	382571	Mm.40173	NM_201531	ENSMUSG00000051726	Kcnf1	Gm1182|Kv5.1	potassium voltage-gated channel, subfamily F, member 1	protein-coding
common_peak2-22882-24-13-0.985854980710112-1.52081014994907	chr14	31420960	31421732	+	0	NA	intron (NM_011103, intron 3 of 17)	intron (NM_011103, intron 3 of 17)	18048	NM_011103	18753	Mm.2314	NM_011103	ENSMUSG00000021948	Prkcd	AI385711|D14Ertd420e|PKC[d]|PKCdelta|Pkcd	protein kinase C, delta	protein-coding
common_peak1-14109-9-13--0.617741515653384-0.459837087125828	chr2	126996456	126996995	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-27532	NM_001163527	73338	Mm.57559	NM_001163527		Itpripl1	1700041B20Rik	inositol 1,4,5-triphosphate receptor interacting protein-like 1	protein-coding
common_peak2-19761-12-8-0.478850983645327-0.562038191119709	chr1	78644453	78644901	+	0	NA	Intergenic	Intergenic	-9723	NM_001033606	74205	Mm.276016	NM_028817	ENSMUSG00000032883	Acsl3	2610510B12Rik|Acs3|C85929|Facl3|Pro2194	acyl-CoA synthetase long-chain family member 3	protein-coding
common_peak1-10139-13-11-0.193509529916613-0.379391706698377	chr13	34077431	34078063	+	0	NA	3' UTR (NM_001163239, exon 6 of 6)	3' UTR (NM_001163239, exon 6 of 6)	16916	NM_001243192	20719	Mm.252210	NM_009254	ENSMUSG00000060147	Serpinb6a	4930482L21Rik|D330015H01Rik|PI-6|Serpinb6|Spi3|ovalbumin	serine (or cysteine) peptidase inhibitor, clade B, member 6a	protein-coding
unique_peak1-7176-8-1-2.00522241794757-2.05605744720049	chr9	62366734	62367255	+	0	NA	intron (NM_175484, intron 1 of 11)	intron (NM_175484, intron 1 of 11)	17857	NM_175484	235431	Mm.335229	NM_175484	ENSMUSG00000041729	Coro2b	CLIPINC|E130012P22Rik	coronin, actin binding protein, 2B	protein-coding
common_peak1-15301-36-30-0.525124775780879-0.956885677565404	chr4	43398954	43400185	+	0	NA	intron (NM_001037709, intron 1 of 11)	intron (NM_001037709, intron 1 of 11)	4715	NM_001037709	100213	Mm.235730	NM_199057	ENSMUSG00000035969	Rusc2	AI840675|mKIAA0375	RUN and SH3 domain containing 2	protein-coding
unique_peak1-5242-19-9-1.08075923177432-1.37307999835977	chr5	51276260	51277129	+	0	NA	Intergenic	Intergenic	668466	NR_027710	19017	Mm.259072	NM_008904	ENSMUSG00000029167	Ppargc1a	A830037N07Rik|ENSMUSG00000079510|Gm11133|PGC-1|PGC-1v|Pgc-1alpha|Pgc1|Pgco1|Ppargc1	peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	protein-coding
common_peak2-31614-8-6-0.197867495889966-1.03789460276074	chr8	122799060	122799556	+	0	NA	Intergenic	(TCCCC)n|Simple_repeat|Simple_repeat	-47178	NR_110496	434353	Mm.411793	NR_110496		A330074K22Rik	-	RIKEN cDNA A330074K22 gene	ncRNA
unique_peak2-39130-7-12--0.901348887842903-1.31827279259406	chr8	84256713	84257270	+	0	NA	intron (NM_001024617, intron 3 of 24)	intron (NM_001024617, intron 3 of 24)	390530	NM_001297593	234515	Mm.324468	NM_001024617	ENSMUSG00000037940	Inpp4b	E130107I17Rik	inositol polyphosphate-4-phosphatase, type II	protein-coding
unique_peak1-6992-9-7-0.18961340640422-1.05908390183068	chr8	120620118	120620692	+	0	NA	Intergenic	Intergenic	-187250	NM_019707	12554	Mm.334841	NM_019707	ENSMUSG00000031841	Cdh13	4932416G01Rik|Cdht|T-cadherin|Tcad	cadherin 13	protein-coding
common_peak2-28618-12-7-0.648775985087639-0.697979855752659	chr5	24820534	24821008	+	0	NA	exon (NM_001081383, exon 36 of 59)	exon (NM_001081383, exon 36 of 59)	92060	NM_144908	231050	Mm.246718	NM_144908	ENSMUSG00000038072	Galnt11	A430075I06Rik|AI648252|E430002F06Rik	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11	protein-coding
common_peak2-22977-14-12-0.198776442216552-0.373562084705529	chr14	55014616	55015209	+	0	NA	intron (NM_001253680, intron 2 of 9)	intron (NM_001253680, intron 2 of 9)	13397	NM_001253680	20540	Mm.142455	NM_011405	ENSMUSG00000000958	Slc7a7	AI790233|my+lat1	solute carrier family 7 (cationic amino acid transporter, y+ system), member 7	protein-coding
common_peak1-11435-53-140--0.998578339982865-5.29202876695851	chr15	100038355	100039730	+	0	NA	intron (NM_001159361, intron 35 of 37)	ORR1C2|LTR|MaLR	-19248	NM_007497	11908	Mm.676	NM_007497	ENSMUSG00000023027	Atf1	-	activating transcription factor 1	protein-coding
common_peak1-16342-25-28-0.00386891021753399-0.304839791830758	chr5	118449239	118450158	+	0	NA	intron (NM_145564, intron 9 of 11)	intron (NM_145564, intron 9 of 11)	22919	NM_145564	231670	Mm.21912	NM_145564	ENSMUSG00000032898	Fbxo21	2810425J22Rik|AU016673|mKIAA0875	F-box protein 21	protein-coding
common_peak2-23578-40-47-0.0740131820299421-0.336492456843107	chr15	79878462	79879554	+	0	NA	Intergenic	Intergenic	30001	NR_028282	100302601		NR_028282		Snord83b	MBII-10	small nucleolar RNA, C/D box 83B	snoRNA
unique_peak1-3487-14-3-1.89921616035764-2.80787975886178	chr19	10698961	10699629	+	0	NA	exon (NM_015735, exon 19 of 27)	exon (NM_015735, exon 19 of 27)	-9428	NM_027913	71768	Mm.169261	NM_027913	ENSMUSG00000043789	Vwce	1300015B04Rik	von Willebrand factor C and EGF domains	protein-coding
common_peak1-13772-7-4-0.477162735410827-1.09384600808989	chr2	35595765	35596186	+	0	NA	Intergenic	ID4|SINE|ID	43723	NM_001290639	69601	Mm.29629	NM_001001602	ENSMUSG00000026883	Dab2ip	2310011D08Rik|AI480459|Aip1|mKIAA1743	disabled 2 interacting protein	protein-coding
common_peak1-13418-14-8-0.729291158915332-0.771068449301682	chr19	53461867	53462577	+	0	NA	intron (NM_172429, intron 2 of 5)	intron (NM_172429, intron 2 of 5)	2841	NM_172429	76479	Mm.313687	NM_172429	ENSMUSG00000025024	Smndc1	2410004J23Rik|4933440I19Rik	survival motor neuron domain containing 1	protein-coding
unique_peak2-36838-7-5-0.214128329577033-1.01466476204226	chr3	88677574	88677929	+	0	NA	intron (NM_001242372, intron 13 of 32)	Lx3A|LINE|L1	38598	NM_001242372	76022	Mm.126870	NM_027389	ENSMUSG00000054199	Gon4l	1500041I23Rik|2610100B20Rik|3632445O20Rik|5430404N14Rik|AA387005	gon-4-like (C.elegans)	protein-coding
common_peak1-10128-59-71-0.155438999430266-0.417582018066374	chr13	32926164	32928104	+	0	NA	Intergenic	(CTCA)n|Simple_repeat|Simple_repeat	15920	NM_025429	66222	Mm.20144	NM_025429	ENSMUSG00000044734	Serpinb1a	1190005M04Rik|AI325983|EI|EIA|ELANH2|LEI|M/NEI|MNEI|PI2	serine (or cysteine) peptidase inhibitor, clade B, member 1a	protein-coding
common_peak2-23070-32-46--0.275496832457978-0.426350872773373	chr14	73325120	73326430	+	0	NA	Intergenic	MLT1A1|LTR|MaLR	-99635	NR_027860	668489	Mm.158324	NR_027860		Gm9199	EG668489	glycine cleavage system protein H (aminomethyl carrier) pseudogene	pseudo
unique_peak1-1211-17-9-0.896368243317676-1.09394599973099	chr11	106657764	106658413	+	0	NA	intron (NM_177088, intron 4 of 19)	intron (NM_177088, intron 4 of 19)	7522	NM_001166685	320162	Mm.30524	NM_177088	ENSMUSG00000018372	Cep95	4732496G21Rik|AI118346|AI448335|Ccdc45|D330027A14Rik|F630025I20Rik	centrosomal protein 95	protein-coding
common_peak1-7665-11-6-0.701338662194009-1.32595962126035	chr1	75124406	75124929	+	0	NA	intron (NM_194333, intron 10 of 11)	intron (NM_194333, intron 10 of 11)	-2867	NM_029342	75570	Mm.442409	NM_029342		Nhej1	1700029B21Rik|XLF|cernunnos	nonhomologous end-joining factor 1	protein-coding
common_peak1-11003-24-14-0.886319307159198-1.33403699391683	chr15	36873741	36874789	+	0	NA	Intergenic	B4|SINE|B4	62892	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
common_peak1-17599-29-22-0.588728124558098-0.950553505527076	chr7	44815852	44817097	+	0	NA	Intergenic	Intergenic	1703430	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak1-2720-15-8-0.842239749113344-0.891319708951327	chr16	92608556	92609321	+	0	NA	intron (NM_001111022, intron 6 of 6)	MER20|DNA|MER1_type	88636	NM_001111023	12394	Mm.4081	NM_009821	ENSMUSG00000022952	Runx1	AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b	runt related transcription factor 1	protein-coding
unique_peak2-39187-12-7-0.648775985087639-0.697979855752659	chr8	95633535	95634117	+	0	NA	intron (NM_007954, intron 7 of 12)	MTD|LTR|MaLR	21356	NM_007954	13884	Mm.88078	NM_007954	ENSMUSG00000057400	Ces1c	Ces-N|Ee-1|Ee1|Es-4|Es-N|Es1|Es4|EsN|PESN	carboxylesterase 1C	protein-coding
unique_peak2-37506-2-6--1.72480917832092-1.26211192963361	chr5	10770188	10770624	+	0	NA	Intergenic	Lx6|LINE|L1	-94623	NR_003596	623849	Mm.335888	NR_003596	ENSMUSG00000091422	Gm6455	EG623849	predicted gene 6455	pseudo
common_peak1-18375-14-8-0.729291158915332-0.771068449301682	chr8	70635264	70635921	+	0	NA	Intergenic	Intergenic	-137119	NM_177698	234353	Mm.32525	NM_027626	ENSMUSG00000030465	Psd3	4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D	pleckstrin and Sec7 domain containing 3	protein-coding
unique_peak1-7028-24-8-1.6232849013254-2.85636458546265	chr8	126698696	126699964	+	0	NA	Intergenic	Intergenic	-55964	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
common_peak2-26276-12-28--1.20920501003993-1.52081014994907	chr2	30719241	30719931	+	0	NA	intron (NM_009116, intron 1 of 3)	intron (NM_009116, intron 1 of 3)	18699	NM_009116	20204	Mm.1802	NM_009116	ENSMUSG00000039476	Prrx2	Prx2|S8	paired related homeobox 2	protein-coding
common_peak2-24051-36-31-0.479321086167754-0.864252281539331	chr16	25425534	25426363	+	0	NA	Intergenic	Intergenic	139045	NM_175165	71338	Mm.126851	NM_175165	ENSMUSG00000048399	Tprg	5430420C16Rik|Tprg1	transformation related protein 63 regulated	protein-coding
common_peak2-26362-8-7-0.00522241794757061-1.00793137938329	chr2	38534112	38534476	+	0	NA	Intergenic	B1_Mur4|SINE|Alu	-34868	NM_011187	19177	Mm.389251	NM_011187	ENSMUSG00000026750	Psmb7	AU020723|MC14	proteasome (prosome, macropain) subunit, beta type 7	protein-coding
common_peak1-9590-9-13--0.617741515653384-0.459837087125828	chr11	119127131	119127614	+	0	NA	TTS (NM_175430)	TTS (NM_175430)	-1909	NM_001159324	14387	Mm.4793	NM_008064	ENSMUSG00000025579	Gaa	E430018M07Rik	glucosidase, alpha, acid	protein-coding
common_peak2-24624-10-17--0.813509656433543-0.699649909729472	chr17	34204334	34204956	+	0	NA	Intergenic	Intergenic	-24679	NM_008206	15001	Mm.116	NM_008206	ENSMUSG00000024334	H2-Oa	H-2Oa	histocompatibility 2, O region alpha locus	protein-coding
unique_peak2-38857-3-6--1.22133801201688-1.08602067057793	chr7	144687173	144687541	+	0	NA	Intergenic	C-rich|Low_complexity|Low_complexity	58000	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
common_peak2-30606-21-38--0.715912953596013-0.993451450456403	chr7	84150941	84152251	+	0	NA	intron (NM_001199224, intron 22 of 22)	intron (NM_001199224, intron 22 of 22)	776823	NM_001199224	244071	Mm.322829	NM_172902	ENSMUSG00000025754	Agbl1	Ccp4|D430020F16|EG244071|Nna1-l1	ATP/GTP binding protein-like 1	protein-coding
common_peak2-25943-13-13--0.0288828914198356-0.309074325783021	chr19	47067764	47068189	+	0	NA	intron (NM_001164363, intron 1 of 17)	B3|SINE|B2	-21212	NM_146100	226180	Mm.276251	NM_146100		Ina	AV028420|NF-66|NF66	internexin neuronal intermediate filament protein, alpha	protein-coding
common_peak1-19461-9-10--0.269818212233077-1.05503135781948	chrX	106920467	106920916	+	0	NA	Intergenic	Intergenic	528596	NM_001037917	622976	Mm.482747	NM_001037917	ENSMUSG00000048621	Gm6377	EG622976	predicted gene 6377	protein-coding
unique_peak2-37809-2-7--1.91745425626332-1.45399745587252	chr5	123746426	123746913	+	0	NA	Intergenic	PB1|SINE|Alu	-47788	NM_029850	77045	Mm.151960	NM_029850	ENSMUSG00000029438	Bcl7a	4432415N06Rik|AI448316	B cell CLL/lymphoma 7A	protein-coding
common_peak1-13342-10-11--0.228547155712387-0.31137425193576	chr19	44145867	44146424	+	0	NA	Intergenic	RMER17C|LTR|ERVK	-1870	NM_001164360	226144	Mm.279865	NM_145502	ENSMUSG00000025198	Erlin1	2810439N09Rik|C80197|Keo4|Spfh1	ER lipid raft associated 1	protein-coding
common_peak2-28288-15-8-0.842239749113344-0.891319708951327	chr4	129913221	129913718	+	0	NA	Intergenic	Intergenic	-13930	NM_001034872	332942	Mm.387701	NM_001034872	ENSMUSG00000023120	Gm853	OTTMUSG00000009560	predicted gene 853	protein-coding
unique_peak1-5850-11-0-3.50869358425161-3.61235994796777	chr6	83010022	83010515	+	0	NA	exon (NM_033606, exon 5 of 12)	exon (NM_033606, exon 5 of 12)	2430	NM_033606	93838	Mm.140332	NM_033606	ENSMUSG00000009145	Dqx1	2310066E11Rik	DEAQ RNA-dependent ATPase	protein-coding
unique_peak2-32464-7-7--0.200909169701811-0.97990265578305	chr1	16519672	16520006	+	0	NA	Intergenic	L1Md_T|LINE|L1	-10456	NM_001111272	29819	Mm.216257	NM_025303	ENSMUSG00000025920	Stau2	-	staufen (RNA binding protein) homolog 2 (Drosophila)	protein-coding
common_peak2-27864-136-255--0.229693325484013-0.930159992204681	chr3	157946543	157948328	+	0	NA	intron (NM_001291453, intron 8 of 25)	intron (NM_001291453, intron 8 of 25)	247789	NM_001289524	67144	Mm.358704	NM_024194	ENSMUSG00000063052	Lrrc40	2610040E16Rik|AI837674	leucine rich repeat containing 40	protein-coding
common_peak1-18976-12-6-0.841421063030034-1.58711810488664	chr9	56103918	56104540	+	0	NA	intron (NM_172924, intron 4 of 6)	intron (NM_172924, intron 4 of 6)	-95352	NM_019793	56434	Mm.28484	NM_019793	ENSMUSG00000032324	Tspan3	1700055K04Rik|TM4-A|Tm4sf8	tetraspanin 3	protein-coding
unique_peak1-1291-12-2-2.06381348436648-2.79529063155376	chr11	119777960	119778527	+	0	NA	exon (NM_001085498, exon 6 of 8)	exon (NM_001085498, exon 6 of 8)	3119	NM_001085498	208092	Mm.306673	NM_001085498	ENSMUSG00000025371	Chmp6	2400004G01Rik	charged multivesicular body protein 6	protein-coding
common_peak1-15412-25-18-0.613922391901521-0.86528749982161	chr4	86690227	86691227	+	0	NA	intron (NM_001110240, intron 4 of 9)	intron (NM_001110240, intron 4 of 9)	170409	NM_139306	230379	Mm.45019	NM_139306	ENSMUSG00000038007	Acer2	2410116I05Rik|Asah3l|CRG-L1|maCER2	alkaline ceramidase 2	protein-coding
common_peak2-26827-16-7-1.11826364226806-1.23399803405144	chr2	152734577	152735026	+	0	NA	Intergenic	(GAA)n|Simple_repeat|Simple_repeat	-2287	NM_001081044	228785	Mm.250604	NM_001081044	ENSMUSG00000027470	Mylk2	9830004H17Rik|BB138278	myosin, light polypeptide kinase 2, skeletal muscle	protein-coding
unique_peak2-37235-5-5--0.289342836727009-0.909929411522249	chr4	89137805	89138154	+	0	NA	Intergenic	Intergenic	-181038	NM_007670	12579	Mm.423094	NM_007670	ENSMUSG00000073802	Cdkn2b	AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b	cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)	protein-coding
unique_peak1-6963-11-1-2.50869358425161-2.83420869758413	chr8	117085452	117085972	+	0	NA	intron (NM_019573, intron 5 of 8)	intron (NM_019573, intron 5 of 8)	122160	NM_019573	80707	Mm.440420	NM_019573	ENSMUSG00000004637	Wwox	5330426P09Rik|9030416C10Rik|WOX1	WW domain-containing oxidoreductase	protein-coding
unique_peak1-61-9-2-1.60465090568306-1.87199725847353	chr1	34110095	34110663	+	0	NA	intron (NM_134448, intron 1 of 97)	intron (NM_134448, intron 1 of 97)	41709	NM_134448	13518	Mm.336625	NM_010081	ENSMUSG00000026131	Dst	2310001O04Rik|A830042E19Rik|AW554249|BP230|BPAG1-n|Bpag|Bpag1|Macf2|ah|athetoid|dt|mKIAA0728|nmf203|nmf339	dystonin	protein-coding
unique_peak2-36598-2-4--1.23938235115068-0.931118710592187	chr2	176927327	176927752	+	0	NA	Intergenic	MTA_Mm-int|LTR|MaLR	-77432	NR_040256	626877	Mm.490744	NR_040256		Gm14405	OTTMUSG00000016573	predicted gene 14405	pseudo
unique_peak2-34911-1-7--2.62705701021674-1.80617997398389	chr15	83215289	83215647	+	0	NA	exon (NM_001159510, exon 7 of 11)	exon (NM_001159510, exon 7 of 11)	-17741	NR_027980	69291	Mm.66794	NM_001033147		1700001L05Rik	-	RIKEN cDNA 1700001L05 gene	ncRNA
unique_peak1-4996-11-6-0.701338662194009-1.32595962126035	chr4	117202085	117202857	+	0	NA	Intergenic	Intergenic	-20458	NM_001285902	140546	Mm.235891	NM_080469	ENSMUSG00000033423	Eri3	PINT1|Prnpip1	exoribonuclease 3	protein-coding
unique_peak2-35045-6-7--0.434601889619698-0.97990265578305	chr16	4558123	4558511	+	0	NA	intron (NM_031182, intron 1 of 6)	intron (NM_031182, intron 1 of 6)	1403	NM_031182	83383	Mm.273210	NM_031182	ENSMUSG00000005718	Tfap4	AI642933|AP-4|D930048N17Rik|Tcfap4|bHLHc41	transcription factor AP4	protein-coding
common_peak2-19622-10-10--0.103016273628528-0.301029995663987	chr1	36691555	36692141	+	0	NA	intron (NM_001126046, intron 5 of 14)	intron (NM_001126046, intron 5 of 14)	-41671	NM_027957	381337	Mm.17413	NM_027957	ENSMUSG00000046337	Fam178b	1700024G10Rik|Gm990	family with sequence similarity 178, member B	protein-coding
unique_peak2-39296-2-9--2.23938235115068-1.87199725847353	chr8	123332722	123333155	+	0	NA	Intergenic	Intergenic	72662	NM_008320	15900	Mm.334861	NM_008320	ENSMUSG00000041515	Irf8	AI893568|ICSBP|IRF-8|Icsbp1|Myls	interferon regulatory factor 8	protein-coding
unique_peak2-38668-6-6--0.241956811677302-0.947717972411649	chr7	98391994	98392398	+	0	NA	intron (NM_011807, intron 1 of 22)	intron (NM_011807, intron 1 of 22)	152900	NM_011807	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
unique_peak2-37978-1-5--2.2120195109379-1.32905871926422	chr6	3290872	3291305	+	0	NA	Intergenic	Intergenic	52569	NR_036696	667335	Mm.380219	NR_036696		Gm8579	EG667335	spermatogenesis associated glutamate (E)-rich protein 4a pseudogene	pseudo
common_peak1-10248-41-62--0.276131218651257-0.491755066901284	chr13	54621590	54622734	+	0	NA	intron (NM_176987, intron 1 of 9)	MYSERV6-int|LTR|ERVK	16996	NM_176987	319719	Mm.376151	NM_176987	ENSMUSG00000043183	Simc1	4732471D19Rik	SUMO-interacting motifs containing 1	protein-coding
unique_peak1-5713-8-3-1.00522241794757-1.39487600375387	chr6	38991313	38991754	+	0	NA	intron (NM_011539, intron 9 of 12)	intron (NM_011539, intron 9 of 12)	26052	NR_040523	69986	Mm.490941	NR_040523		1700025N23Rik	-	RIKEN cDNA 1700025N23 gene	ncRNA
common_peak2-23491-19-21--0.0567442919756109-0.301029995663971	chr15	75868357	75869443	+	0	NA	Intergenic	Intergenic	-24134	NM_134087	105732	Mm.267178	NM_134087	ENSMUSG00000046761	Fam83h	AA409316	family with sequence similarity 83, member H	protein-coding
common_peak1-19170-69-97--0.019567396856476-0.30102999566397	chr9	96630595	96631683	+	0	NA	TTS (NR_015511)	TTS (NR_015511)	955	NM_175537	245007	Mm.485954	NM_175537	ENSMUSG00000040433	Zbtb38	A930014K01Rik|CIBZ	zinc finger and BTB domain containing 38	protein-coding
common_peak1-15685-8-16--1.08224042330277-0.891319708951328	chr4	138434617	138435093	+	0	NA	intron (NM_012044, intron 1 of 4)	intron (NM_012044, intron 1 of 4)	998	NM_012044	26970	Mm.296007	NM_012044	ENSMUSG00000028751	Pla2g2e	-	phospholipase A2, group IIE	protein-coding
unique_peak1-5383-7-3-0.799090830298189-1.23214870625617	chr5	100514407	100514923	+	0	NA	intron (NM_182841, intron 6 of 7)	intron (NM_182841, intron 6 of 7)	7684	NR_045993	76003	Mm.447060	NR_045993	ENSMUSG00000086259	Tmem150cos	5830403M04Rik	transmembrane protein 150C, opposite strand	ncRNA
unique_peak2-33360-4-9--1.34538860874061-1.36011389749466	chr11	31871336	31871742	+	0	NA	intron (NM_026262, intron 1 of 4)	(GA)n|Simple_repeat|Simple_repeat	5906	NM_026262	67592	Mm.78654	NM_026262	ENSMUSG00000020299	4930524B15Rik	-	RIKEN cDNA 4930524B15 gene	protein-coding
common_peak2-27385-13-15--0.221527969362231-0.308519316180257	chr3	87515579	87516030	+	0	NA	intron (NM_001003912, intron 15 of 39)	intron (NM_001003912, intron 15 of 39)	36741	NM_028971	74485	Mm.474494	NM_028971	ENSMUSG00000023084	Lrrc71	4933430H15Rik	leucine rich repeat containing 71	protein-coding
unique_peak2-33395-3-11--1.99894559068043-1.95434855131066	chr11	50915685	50916372	+	0	NA	Intergenic	Intergenic	17439	NR_045865	619293	Mm.387061	NM_001033798	ENSMUSG00000072982	9230009I02Rik	-	RIKEN cDNA 9230009I02 gene	ncRNA
common_peak1-7543-82-112-0.0730841818905468-0.347098583729822	chr1	36456683	36458182	+	0	NA	intron (NM_001277076, intron 19 of 52)	MLT1C|LTR|MaLR	28296	NM_001277076	100534273	Mm.389112	NM_001277076		Fer1l5	4930533C12Rik	fer-1-like 5 (C. elegans)	protein-coding
unique_peak2-36999-6-5--0.0195643903408542-0.947717972411649	chr3	121650035	121650400	+	0	NA	Intergenic	Lx7|LINE|L1	-6027	NM_172525	214137	Mm.229287	NM_172525	ENSMUSG00000039831	Arhgap29	6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1	Rho GTPase activating protein 29	protein-coding
unique_peak2-38978-5-19--2.02630843089322-2.19184853030482	chr8	40423243	40424038	+	0	NA	intron (NR_044988, intron 2 of 3)	L1Md_T|LINE|L1	40306	NR_044988	621335	Mm.208080	NR_044988		Gm6213	EG621335	predicted gene 6213	ncRNA
common_peak1-14254-17-17-0.0483713367627256-0.325169893479371	chr2	155242798	155243642	+	0	NA	intron (NM_001242558, intron 7 of 12)	intron (NM_001242558, intron 7 of 12)	23299	NM_001242558	56406	Mm.27592	NM_019825	ENSMUSG00000038369	Ncoa6	AIB3|ASC-2|ASC2|NRC|Ncoa7|PRIP|RAP250|mKIAA0181	nuclear receptor coactivator 6	protein-coding
unique_peak2-36423-5-7--0.704380336005853-1.01466476204226	chr2	128569009	128569332	+	0	NA	intron (NM_008587, intron 4 of 18)	intron (NM_008587, intron 4 of 18)	44437	NM_008587	17289	Mm.239655	NM_008587	ENSMUSG00000014361	Mertk	Eyk|Mer|Nyk|nmf12	c-mer proto-oncogene tyrosine kinase	protein-coding
unique_peak2-33068-4-10--1.48289213249054-1.5150158574804	chr10	78464355	78464934	+	0	NA	Intergenic	Intergenic	-15425	NM_147040	259042	Mm.271575	NM_147040	ENSMUSG00000063216	Olfr1351	MOR139-4	olfactory receptor 1351	protein-coding
unique_peak1-5614-23-5-2.13680500378792-3.68490442130631	chr6	118128558	118129326	+	0	NA	intron (NM_001080780, intron 5 of 18)	intron (NM_001080780, intron 5 of 18)	18820	NM_009050	19713	Mm.57199	NM_009050	ENSMUSG00000030110	Ret	PTC|RET51|RET9|c-Ret	ret proto-oncogene	protein-coding
common_peak2-30513-8-7-0.00522241794757061-1.00793137938329	chr7	65483778	65484244	+	0	NA	Intergenic	Lx9|LINE|L1	-429561	NM_009728	11982	Mm.135129	NM_009728	ENSMUSG00000025324	Atp10a	Atp10c|pfatp	ATPase, class V, type 10A	protein-coding
common_peak2-20290-36-31-0.479321086167754-0.864252281539331	chr1	193301513	193302493	+	0	NA	Intergenic	B1_Mur2|SINE|Alu	-81083	NM_144880	226849	Mm.205569	NM_144880	ENSMUSG00000026626	Ppp2r5a	PR61alpha	protein phosphatase 2, regulatory subunit B', alpha	protein-coding
common_peak2-22700-11-12--0.191746133889479-0.310474156842889	chr13	100492049	100492736	+	0	NA	Intergenic	MLT1F1|LTR|MaLR	178246	NM_013732	27220	Mm.75498	NM_013732	ENSMUSG00000021647	Cartpt	Cart	CART prepropeptide	protein-coding
unique_peak2-39236-4-7--1.02346051385325-1.09384600808989	chr8	111642732	111643139	+	0	NA	Intergenic	Intergenic	182175	NR_037295	100526511		NR_037295		Mir3108	mmu-mir-3108	microRNA 3108	ncRNA
unique_peak1-4705-12-1-2.64877598508764-3.36932189928148	chr3	101524317	101524943	+	0	NA	Intergenic	Lx8|LINE|L1	115516	NM_172295	242125	Mm.32900	NM_172295	ENSMUSG00000044313	Mab21l3	-	mab-21-like 3 (C. elegans)	protein-coding
unique_peak2-36034-7-22--1.72447112575882-2.07034318903805	chr19	43571110	43571731	+	0	NA	3' UTR (NM_031396, exon 11 of 11)	3' UTR (NM_031396, exon 11 of 11)	27675	NM_010324	14718	Mm.19039	NM_010324	ENSMUSG00000025190	Got1	AI789014|Got-1|cAspAT|cCAT	glutamate oxaloacetate transaminase 1, soluble	protein-coding
common_peak2-31516-58-72-0.106125376010479-0.371520254652761	chr8	108714248	108715769	+	0	NA	intron (NM_178798, intron 3 of 9)	intron (NM_178798, intron 3 of 9)	19825	NM_001007567	66432	Mm.269029	NM_001007567	ENSMUSG00000033106	Slc7a6os	2010007L18Rik|2400002F02Rik	solute carrier family 7, member 6 opposite strand	protein-coding
common_peak1-13829-12-19--0.673152109799724-0.546772548767014	chr2	59155004	59155583	+	0	NA	intron (NM_175464, intron 9 of 20)	intron (NM_175464, intron 9 of 20)	69446	NR_040510	76676	Mm.110038	NR_040510	ENSMUSG00000087455	5330411J11Rik	-	RIKEN cDNA 5330411J11 gene	ncRNA
common_peak2-20955-30-25-0.469235691350781-0.734130039933318	chr11	17211491	17212175	+	0	NA	Intergenic	Intergenic	54212	NM_020558	57316	Mm.287982	NM_020558	ENSMUSG00000000581	C1d	1110036E10Rik|AI875855|SUN-CoR	C1D nuclear receptor co-repressor	protein-coding
common_peak2-28902-10-8-0.186490343566457-1.078512453669	chr5	91533497	91533898	+	0	NA	Intergenic	Intergenic	30054	NM_007950	13874	Mm.4791	NM_007950	ENSMUSG00000029377	Ereg	EPR	epiregulin	protein-coding
common_peak1-11204-15-14-0.105274154947137-0.330004445983672	chr15	77910412	77911154	+	0	NA	intron (NM_007583, intron 1 of 3)	intron (NM_007583, intron 1 of 3)	38927	NM_007583	12300	Mm.277338	NM_007583		Cacng2	AW060990|B230105C07Rik|B930041E13Rik|stargazer|stargazin|stg|wag|waggler	calcium channel, voltage-dependent, gamma subunit 2	protein-coding
common_peak2-28233-17-21--0.24113528043226-0.322753776620787	chr4	120571262	120571888	+	0	NA	Intergenic	ORR1B1|LTR|MaLR	21101	NM_182929	242662	Mm.192502	NM_182929	ENSMUSG00000032890	Rims3	A730060M23Rik|Nim3|Rim3|mKIAA0237	regulating synaptic membrane exocytosis 3	protein-coding
unique_peak2-35268-18-32--0.731474968130102-0.907815120698057	chr17	3083644	3084988	+	0	NA	promoter-TSS (NR_003519)	promoter-TSS (NR_003519)	-133	NR_003519	328734	Mm.335641	NR_003519		Pisd-ps2	D030013I16Rik	phosphatidylserine decarboxylase, pseudogene 2	pseudo
common_peak2-31014-13-16--0.30899081061257-0.330004445983672	chr8	11321832	11322445	+	0	NA	intron (NM_009932, intron 3 of 47)	intron (NM_009932, intron 3 of 47)	9309	NM_009932	12827	Mm.181021	NM_009932	ENSMUSG00000031503	Col4a2	Col4a-2	collagen, type IV, alpha 2	protein-coding
unique_peak2-39688-7-5-0.214128329577033-1.01466476204226	chr9	110315746	110316152	+	0	NA	Intergenic	Intergenic	-5235	NM_001081043	104831	Mm.335477	NM_001081043	ENSMUSG00000036057	Ptpn23	AI462446|PTP-TD14	protein tyrosine phosphatase, non-receptor type 23	protein-coding
common_peak2-22588-38-41-0.17913523651977-0.420706537898431	chr13	69809894	69811290	+	0	NA	Intergenic	MTD|LTR|MaLR	59698	NM_145354	28114	Mm.260009	NM_145354	ENSMUSG00000021595	Nsun2	D13Wsu123e|Misu	NOL1/NOP2/Sun domain family member 2	protein-coding
common_peak2-24953-33-41--0.0609798602532319-0.303710893903464	chr18	74268130	74269081	+	0	NA	Intergenic	Intergenic	-44002	NM_172632	225724	Mm.254517	NM_172632	ENSMUSG00000024558	Mapk4	A330097D03Rik|Erk3|Prkm4|p63Mapk	mitogen-activated protein kinase 4	protein-coding
common_peak2-24494-11-19--0.813234510635749-0.769930178837768	chr17	25239991	25240819	+	0	NA	intron (NM_001163661, intron 16 of 20)	URR1A|DNA|MER1_type	12445	NM_027880	71718	Mm.288702	NM_027880	ENSMUSG00000024170	Telo2	1200003M09Rik|AI415602|Tel2|mKIAA0683	TEL2, telomere maintenance 2, homolog (S. cerevisiae)	protein-coding
unique_peak2-38379-8-11--0.579740082773585-1.14218153353838	chr7	16221467	16221990	+	0	NA	intron (NM_145707, intron 2 of 4)	Lx3A|LINE|L1	3398	NM_145707	246791	Mm.425362	NM_145707	ENSMUSG00000066772	Obox3	Ohx	oocyte specific homeobox 3	protein-coding
common_peak2-31534-17-27--0.589058583852566-0.604689589251113	chr8	110997167	110998127	+	0	NA	Intergenic	B4A|SINE|B4	110930	NR_077224	109215	Mm.65282	NR_077224		3010033K07Rik	-	RIKEN cDNA 3010033K07 gene	ncRNA
common_peak1-7932-10-24--1.28744084476596-1.59083646988122	chr1	150392749	150393213	+	0	NA	Intergenic	L1Md_T|LINE|L1	1415433	NM_008869	18783	Mm.4186	NM_008869	ENSMUSG00000056220	Pla2g4a	Pla2g4|cPLA2|cPLA2alpha	phospholipase A2, group IVA (cytosolic, calcium-dependent)	protein-coding
common_peak1-19365-20-20-0.0957573618124323-0.321718508207528	chrX	16618009	16618878	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-129553	NM_010883	17986	Mm.5014	NM_010883	ENSMUSG00000040138	Ndp	ND|Ndph	Norrie disease (pseudoglioma) (human)	protein-coding
unique_peak2-39133-5-9--1.02630843089322-1.21398586181642	chr8	84723912	84724320	+	0	NA	Intergenic	MLT1J1|LTR|MaLR	202369	NM_001254747	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
unique_peak1-6014-7-1-1.79909083029819-1.80617997398389	chr6	108787974	108788487	+	0	NA	intron (NM_138677, intron 2 of 11)	intron (NM_138677, intron 2 of 11)	9595	NM_138677	192193	Mm.21596	NM_138677	ENSMUSG00000030104	Edem1	A130059K23Rik|EDEM|mKIAA0212	ER degradation enhancer, mannosidase alpha-like 1	protein-coding
common_peak2-27043-25-34--0.26743311159986-0.387290225425543	chr2	180220286	180221561	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-13758	NM_018766	18216	Mm.301712	NM_018766	ENSMUSG00000027568	Ntsr1	NT-1R|NTR-1|NTR1	neurotensin receptor 1	protein-coding
unique_peak2-38833-6-5--0.0195643903408542-0.947717972411649	chr7	141477963	141478265	+	0	NA	intron (NM_001081331, intron 5 of 7)	L1MA9|LINE|L1	-61334	NM_007400	11489	Mm.439714	NM_007400	ENSMUSG00000054555	Adam12	Mltna|mKIAA4001	a disintegrin and metallopeptidase domain 12 (meltrin alpha)	protein-coding
common_peak2-30777-33-31-0.331337562525529-0.549429090733244	chr7	126474552	126475577	+	0	NA	Intergenic	L1MA4|LINE|L1	127722	NM_025989	67133	Mm.46403	NM_025989	ENSMUSG00000030954	Gp2	2310037I18Rik|AV060639	glycoprotein 2 (zymogen granule membrane)	protein-coding
common_peak1-7661-55-102--0.481880656030516-1.27244447704216	chr1	74391431	74392831	+	0	NA	intron (NM_019999, intron 1 of 8)	intron (NM_019999, intron 1 of 8)	12947	NM_019999	56695	Mm.384726	NM_019999	ENSMUSG00000026179	Pnkd	2210013N15Rik|2810403H05Rik|AI854243|Brp17|MNCb-5687|MR-1|Tahccp2	paroxysmal nonkinesiogenic dyskinesia	protein-coding
common_peak1-18451-23-16-0.634304663258741-0.82304638657543	chr8	83698615	83699614	+	0	NA	Intergenic	Intergenic	-160309	NM_027554	74841	Mm.246018	NM_027554	ENSMUSG00000038250	Usp38	4631402N15Rik|4833420O05Rik|AA536967|AU044701|AW544820|mKIAA1891	ubiquitin specific peptidase 38	protein-coding
common_peak2-29421-18-6-1.50556422917075-2.02801025126771	chr6	5508904	5509196	+	0	NA	Intergenic	RLTR31A_Mm|LTR|ERVK	-62772	NM_013743	27273	Mm.235547	NM_013743	ENSMUSG00000019577	Pdk4	AV005916	pyruvate dehydrogenase kinase, isoenzyme 4	protein-coding
common_peak2-27124-6-10--0.894033508256995-1.21398586181642	chr3	19187652	19188128	+	0	NA	intron (NM_001122759, intron 1 of 12)	(TCTA)n|Simple_repeat|Simple_repeat	-22882	NM_008802	18583	Mm.355614	NM_008802	ENSMUSG00000069094	Pde7a	AU015378|AW047537	phosphodiesterase 7A	protein-coding
common_peak2-25773-16-22--0.405298313788951-0.440610794044987	chr19	32387548	32388421	+	0	NA	intron (NM_144792, intron 2 of 9)	intron (NM_144792, intron 2 of 9)	35822	NM_001168525	208449	Mm.329810	NM_144792	ENSMUSG00000040451	Sgms1	9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23	sphingomyelin synthase 1	protein-coding
unique_peak2-32675-8-16--1.08224042330277-0.891319708951328	chr1	135852513	135853123	+	0	NA	Intergenic	Intergenic	-34840	NM_054077	116847	Mm.214514	NM_054077	ENSMUSG00000041577	Prelp	7330409J17Rik|SLRR2A	proline arginine-rich end leucine-rich repeat	protein-coding
common_peak1-19410-12-12--0.0516637330534535-0.309718203022949	chrX	73477985	73478697	+	0	NA	Intergenic	Intergenic	-31304	NM_001013760	238829	Mm.292319	NM_001013760	ENSMUSG00000071738	Gm4937	EG238829	predicted gene 4937	protein-coding
common_peak1-18674-18-31--0.687080848771648-0.820293215674341	chr8	119394838	119395626	+	0	NA	Intergenic	(CAGA)n|Simple_repeat|Simple_repeat	50104	NM_026844	66531	Mm.4011	NM_026844	ENSMUSG00000014633	Cmc2	1110046L09Rik|2310061C15Rik|DC13	COX assembly mitochondrial protein 2	protein-coding
common_peak1-17734-9-6-0.382258484346616-1.11707584880836	chr7	80535285	80535631	+	0	NA	intron (NM_177740, intron 1 of 3)	intron (NM_177740, intron 1 of 3)	-14798	NR_040324	319783	Mm.349813	NR_040324	ENSMUSG00000097756	A730056A06Rik	C76391	RIKEN cDNA A730056A06 gene	ncRNA
common_peak2-27041-9-9--0.132314688483142-1.03275496310833	chr2	180218712	180219303	+	0	NA	Intergenic	Intergenic	-15674	NM_018766	18216	Mm.301712	NM_018766	ENSMUSG00000027568	Ntsr1	NT-1R|NTR-1|NTR1	neurotensin receptor 1	protein-coding
common_peak2-21711-33-26-0.576450060362061-0.950816664083185	chr11	107547839	107548558	+	0	NA	TTS (NM_198298)	TTS (NM_198298)	29592	NM_007582	12299	Mm.57093	NM_007582	ENSMUSG00000020722	Cacng1	-	calcium channel, voltage-dependent, gamma subunit 1	protein-coding
common_peak1-18940-18-3-2.31291915122835-3.35694334496952	chr9	46175317	46176216	+	0	NA	Intergenic	B3A|SINE|B2	-47697	NM_183104	74361	Mm.159169	NM_183104	ENSMUSG00000056617	4931429L15Rik	-	RIKEN cDNA 4931429L15 gene	protein-coding
common_peak1-16947-20-13-0.680719862533589-0.809260849721102	chr6	84233412	84234303	+	0	NA	Intergenic	IAPLTR2_Mm|LTR|ERVK	139975	NR_046063	100038556	Mm.387783	NR_046063		Gm10445	ENSMUSG00000072956	predicted gene 10445	ncRNA
common_peak2-20009-24-14-0.886319307159198-1.33403699391683	chr1	135022152	135022770	+	0	NA	Intergenic	B3|SINE|B2	-5282	NM_133819	108954	Mm.293628	NM_133819	ENSMUSG00000046062	Ppp1r15b	1810033K10Rik|AI606441|C530022L24Rik|CReP	protein phosphatase 1, regulatory (inhibitor) subunit 15b	protein-coding
common_peak2-25760-127-118-0.756568748020113-5.04485512087423	chr19	30029928	30031546	+	0	NA	intron (NM_001164724, intron 6 of 7)	intron (NM_001164724, intron 6 of 7)	10457	NM_001164724	77125	Mm.182359	NM_133775	ENSMUSG00000024810	Il33	9230117N10Rik|Il-33|Il1f11|NF-HEV	interleukin 33	protein-coding
common_peak2-21651-10-15--0.643584654991231-0.519648556297791	chr11	102297322	102297934	+	0	NA	TTS (NM_199200)	TTS (NM_199200)	5992	NM_008175	14824	Mm.1568	NM_008175	ENSMUSG00000034708	Grn	Pgrn|epithelin	granulin	protein-coding
unique_peak2-34466-1-9--2.94898510510411-2.31132995230379	chr14	31414293	31414780	+	0	NA	intron (NM_011103, intron 13 of 17)	intron (NM_011103, intron 13 of 17)	24858	NM_011103	18753	Mm.2314	NM_011103	ENSMUSG00000021948	Prkcd	AI385711|D14Ertd420e|PKC[d]|PKCdelta|Pkcd	protein kinase C, delta	protein-coding
common_peak2-20434-78-123--0.14737521622634-0.412878588947788	chr10	31608419	31610076	+	0	NA	intron (NM_001013411, intron 4 of 6)	L1_Mus3|LINE|L1	-279716	NM_001146349	268291	Mm.295212	NM_001146349	ENSMUSG00000063760	Rnf217	AU016819|Ibrdc1	ring finger protein 217	protein-coding
common_peak2-25419-16-17--0.0516613591742505-0.301029995663984	chr19	55868935	55869669	+	0	NA	intron (NM_001142920, intron 4 of 11)	intron (NM_001142920, intron 4 of 11)	53002	NM_001142923	21416	Mm.139815	NM_009333	ENSMUSG00000024985	Tcf7l2	TCF4B|TCF4E|Tcf-4|Tcf4|mTcf-4B|mTcf-4E	transcription factor 7 like 2, T cell specific, HMG box	protein-coding
unique_peak1-5270-22-1-3.6472841050874-6.28700305248716	chr5	64647807	64648682	+	0	NA	exon (NM_001289514, exon 2 of 19)	exon (NM_001289514, exon 2 of 19)	26648	NM_001289514	57915	Mm.286353	NM_019636	ENSMUSG00000029174	Tbc1d1	1110062G02Rik|AI385682|AW555803|Tbc1|mKIAA1108	TBC1 domain family, member 1	protein-coding
common_peak2-26308-17-27--0.589058583852566-0.604689589251113	chr2	32524401	32525486	+	0	NA	exon (NM_001146348, exon 3 of 15)	exon (NM_001146348, exon 3 of 15)	18343	NR_106168	102465885		NR_106168		Mir8093	mmu-mir-8093	microRNA mir-8093	ncRNA
unique_peak2-39660-0-4--3.16205902536157-1.10720996964787	chr9	107334083	107334430	+	0	NA	intron (NM_001174048, intron 2 of 37)	intron (NM_001174048, intron 2 of 37)	32045	NM_020263	56808	Mm.273084	NM_020263	ENSMUSG00000010066	Cacna2d2	Cacna2d|a2d2|du|mKIAA0558|td|torpid	calcium channel, voltage-dependent, alpha 2/delta subunit 2	protein-coding
common_peak1-8139-27-20-0.599228528116475-0.90781512069806	chr1	190978550	190979432	+	0	NA	Intergenic	Intergenic	-147272	NM_172650	226823	Mm.209880	NM_172650	ENSMUSG00000026608	Kctd3	4930438A20Rik|9330185B06|E330032J19Rik|NY-REN-45	potassium channel tetramerisation domain containing 3	protein-coding
common_peak1-7625-11-8-0.338768582809301-1.14218153353838	chr1	64119998	64120471	+	0	NA	intron (NM_033563, intron 2 of 3)	intron (NM_033563, intron 2 of 3)	-31159	NR_105864	102466760		NR_105864		Mir6899	mmu-mir-6899	microRNA mir-6899	ncRNA
unique_peak2-32586-7-7--0.200909169701811-0.97990265578305	chr1	89467532	89467960	+	0	NA	intron (NM_001111314, intron 1 of 14)	intron (NM_001111314, intron 1 of 14)	2699	NM_001111314	53972	Mm.435439	NM_019867	ENSMUSG00000026259	Ngef	Tims2|ephexin	neuronal guanine nucleotide exchange factor	protein-coding
common_peak2-23150-10-8-0.186490343566457-1.078512453669	chr14	118566491	118566971	+	0	NA	Intergenic	L1Md_A|LINE|L1	30382	NM_021434	58245	Mm.275411	NM_021434	ENSMUSG00000022131	Gpr180	AB041545|E130016I23Rik|Itr	G protein-coupled receptor 180	protein-coding
common_peak1-9176-24-47--0.791752597953439-1.35770911664594	chr11	78362616	78363739	+	0	NA	intron (NM_133706, intron 1 of 2)	intron (NM_133706, intron 1 of 2)	1060	NM_133706	69071	Mm.29431	NM_133706	ENSMUSG00000037278	Tmem97	1810014L12Rik|AI115531|AL022956|D11Bhm182e	transmembrane protein 97	protein-coding
unique_peak2-37918-3-6--1.22133801201688-1.08602067057793	chr5	144903960	144904338	+	0	NA	intron (NM_001081109, intron 3 of 13)	B1_Mus1|SINE|Alu	42844	NM_001081109	231876	Mm.288726	NM_001081109	ENSMUSG00000038970	Lmtk2	2900041G10Rik|A330101P12Rik|BREK|KPI-2|KPI2|aatyk2|cprk	lemur tyrosine kinase 2	protein-coding
unique_peak2-36972-6-12--1.13504160776079-1.45089835786865	chr3	115969048	115969608	+	0	NA	Intergenic	Intergenic	-12926	NM_022427	64378	Mm.40025	NM_022427	ENSMUSG00000068696	Gpr88	AW061286|Strg	G-protein coupled receptor 88	protein-coding
common_peak2-21728-18-21--0.146512467408946-0.306326795069975	chr11	113683342	113684077	+	0	NA	intron (NM_172800, intron 34 of 44)	intron (NM_172800, intron 34 of 44)	-70580	NM_001163346	56699	Mm.293378	NM_020006	ENSMUSG00000041598	Cdc42ep4	1500041M20Rik|Borg4|CEP4	CDC42 effector protein (Rho GTPase binding) 4	protein-coding
unique_peak2-35981-6-5--0.0195643903408542-0.947717972411649	chr19	24649077	24649434	+	0	NA	Intergenic	MTB|LTR|MaLR	-18938	NM_008846	18719	Mm.217214	NM_008846	ENSMUSG00000024867	Pip5k1b	PI4P5K-I[b]|PIP5K1-beta|PIP5KIbeta|Pipk5b|STM7	phosphatidylinositol-4-phosphate 5-kinase, type 1 beta	protein-coding
common_peak1-9094-25-39--0.460078189542257-0.621525249893804	chr11	69996065	69997257	+	0	NA	Intergenic	Intergenic	16536	NM_010796	17312	Mm.252405	NM_010796	ENSMUSG00000000318	Clec10a	CD301a|M-ASGP-BP-1|Mgl|Mgl1	C-type lectin domain family 10, member A	protein-coding
common_peak1-15635-22-8-1.47735910364509-2.29727994934156	chr4	133897339	133898141	+	0	NA	Intergenic	Intergenic	-1221	NM_001039677	230810	Mm.358876	NM_001039677	ENSMUSG00000028836	Slc30a2	6030430C21|ZnT-2|Znt2	solute carrier family 30 (zinc transporter), member 2	protein-coding
common_peak1-8268-14-12-0.198776442216552-0.373562084705529	chr10	24132619	24133396	+	0	NA	Intergenic	Intergenic	-182241	NM_010217	14219	Mm.390287	NM_010217	ENSMUSG00000019997	Ctgf	Ccn2|Fisp12|Hcs24|fisp-12	connective tissue growth factor	protein-coding
unique_peak1-4645-11-1-2.50869358425161-2.83420869758413	chr3	88517878	88518548	+	0	NA	Intergenic	Intergenic	-2563	NM_009069	19769	Mm.4009	NM_009069		Rit1	RIBB|ROC1|Rit	Ras-like without CAAX 1	protein-coding
common_peak1-12539-15-15-0.0121647505556561-0.30803596071496	chr18	4921518	4922197	+	0	NA	Intergenic	CpG	109373	NR_045881	100038439	Mm.387569	NR_045881	ENSMUSG00000097043	Gm10556	ENSMUSG00000073646	predicted gene 10556	ncRNA
common_peak2-29301-22-27--0.160070816970199-0.317737750275047	chr5	145114181	145115070	+	0	NA	intron (NM_025833, intron 1 of 13)	intron (NM_025833, intron 1 of 13)	-4167	NR_102374	100579137		NR_102372		Dmr	-	Dmrt1 related	ncRNA
common_peak1-18086-22-21-0.187852486450107-0.376654945067947	chr8	84656068	84657048	+	0	NA	Intergenic	(TTC)n|Simple_repeat|Simple_repeat	269927	NM_001254747	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak2-20021-4-8--1.19338551529556-1.21878474469819	chr1	135732156	135732532	+	0	NA	Intergenic	G-rich|Low_complexity|Low_complexity	71406	NM_054076	269120	Mm.59985	NM_054076	ENSMUSG00000010311	Optc	-	opticin	protein-coding
common_peak2-31601-59-52-0.597443546309379-1.60060333250236	chr8	121950070	121951387	+	0	NA	Intergenic	Intergenic	-10334	NM_027950	71839	Mm.272357	NM_027950	ENSMUSG00000074063	Osgin1	1700012B18Rik|Okl38	oxidative stress induced growth inhibitor 1	protein-coding
unique_peak1-6801-12-3-1.64877598508764-2.36932189928148	chr8	70723709	70724216	+	0	NA	Intergenic	B4A|SINE|B4	-76465	NM_028182	72281	Mm.40974	NM_028182	ENSMUSG00000053886	Sh2d4a	2210402M20Rik|SH2A	SH2 domain containing 4A	protein-coding
common_peak1-15250-15-15-0.0121647505556561-0.30803596071496	chr4	11990155	11990952	+	0	NA	intron (NR_110955, intron 12 of 28)	intron (NR_110955, intron 12 of 28)	24551	NM_177861	329795	Mm.475125	NM_177861	ENSMUSG00000049488	Tmem67	5330408M12Rik|B230117O07|b2b1163.1Clo|b2b1291.1Clo	transmembrane protein 67	protein-coding
common_peak2-24550-49-44-0.514430726695509-1.10994003514438	chr17	28177057	28177902	+	0	NA	intron (NM_181413, intron 13 of 24)	intron (NM_181413, intron 13 of 24)	40050	NM_013687	21463	Mm.29758	NM_013687	ENSMUSG00000062859	Tcp11	D17Ken1|Tcp-11	t-complex protein 11	protein-coding
common_peak1-16734-17-25--0.482143379936054-0.479250674391597	chr6	31087882	31088709	+	0	NA	intron (NR_110471, intron 3 of 3)	B1_Mur2|SINE|Alu	-75202	NR_029532	387223		NR_029532	miRBase:MI0000143	Mir29b-1	Mirn29b|Mirn29b-1	microRNA 29b-1	ncRNA
unique_peak2-34230-4-16--2.11092335510359-1.97518968347063	chr13	51846756	51847438	+	0	NA	intron (NM_001281880, intron 2 of 16)	intron (NM_001281880, intron 2 of 16)	42019	NM_001281880	20354	Mm.33903	NM_013660	ENSMUSG00000021451	Sema4d	CD100|Semacl2|Semaj|Semcl2|coll-4	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D	protein-coding
unique_peak2-34523-4-6--0.830815435910851-0.989110657569874	chr14	54228039	54228530	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-57331	NM_001205242	100568452	Mm.213248	NM_001205242		A430107P09Rik	Va10	RIKEN cDNA A430107P09 gene	protein-coding
common_peak2-31076-19-54--1.37867238686297-3.56455313593768	chr8	23255923	23257056	+	0	NA	intron (NM_011848, intron 10 of 15)	intron (NM_011848, intron 10 of 15)	16477	NM_001162947	23954	Mm.41413	NM_011848	ENSMUSG00000031478	Nek3	-	NIMA (never in mitosis gene a)-related expressed kinase 3	protein-coding
unique_peak2-36156-12-19--0.673152109799724-0.546772548767014	chr2	25403038	25403763	+	0	NA	promoter-TSS (NM_001290413)	promoter-TSS (NM_001290413)	-940	NM_009422	22030	Mm.3399	NM_009422	ENSMUSG00000026942	Traf2	AI325259	TNF receptor-associated factor 2	protein-coding
common_peak2-25806-21-23--0.0154732354549205-0.305650498375555	chr19	37831123	37831915	+	0	NA	Intergenic	RLTR15|LTR|ERVK	59221	NM_007811	13082	Mm.42230	NM_007811	ENSMUSG00000024987	Cyp26a1	Cyp26|P450RA|P450RAI|RAH	cytochrome P450, family 26, subfamily a, polypeptide 1	protein-coding
common_peak2-27362-7-8--0.370834171144123-1.00793137938329	chr3	83869704	83870159	+	0	NA	Intergenic	Intergenic	-25848	NM_172681	229473	Mm.28838	NM_172681	ENSMUSG00000033767	D930015E06Rik	Kiaa0922|mKIAA0922	RIKEN cDNA D930015E06 gene	protein-coding
unique_peak2-33075-5-8--0.874305337448166-1.10484139239135	chr10	79766459	79766961	+	0	NA	intron (NM_011789, intron 3 of 13)	B1_Mus2|SINE|Alu	2145	NM_011789	23805	Mm.57247	NM_011789	ENSMUSG00000020135	Apc2	AI852447|APCL|R75424	adenomatosis polyposis coli 2	protein-coding
unique_peak2-38853-7-20--1.59322659248057-1.71830443967823	chr7	144553207	144553908	+	0	NA	Intergenic	ORR1B2|LTR|MaLR	-47429	NM_010096	13593	Mm.258708	NM_010096	ENSMUSG00000010476	Ebf3	3110018A08Rik|O/E-2|mKIAA4201	early B cell factor 3	protein-coding
common_peak1-9024-18-9-0.990991056340989-1.23014042908325	chr11	61643964	61644687	+	0	NA	intron (NM_013881, intron 7 of 26)	intron (NM_013881, intron 7 of 26)	24269	NM_013881	29869	Mm.162025	NM_013881	ENSMUSG00000004798	Ulk2	A830085I22Rik|AU015340|Unc51.2|mKIAA0623	unc-51 like kinase 2	protein-coding
common_peak2-32306-19-22--0.120874629395327-0.306080386793804	chrX	48108627	48109352	+	0	NA	Intergenic	ORR1A4-int|LTR|MaLR	-85624	NM_133729	70415	Mm.391246	NM_133729		2610018G03Rik	Mst4	RIKEN cDNA 2610018G03 gene	protein-coding
common_peak2-27485-23-20-0.32945008173032-0.471456499375596	chr3	94587721	94588689	+	0	NA	intron (NM_001037711, intron 1 of 20)	intron (NM_001037711, intron 1 of 20)	2232	NM_001293727	70737	Mm.87634	NM_001037711	ENSMUSG00000068876	Cgn	6330408J11Rik	cingulin	protein-coding
common_peak2-27007-7-6--0.00826409175941478-0.97990265578305	chr2	173247678	173248049	+	0	NA	Intergenic	MTA_Mm-int|LTR|MaLR	-100230	NM_028158	72221	Mm.46132	NM_028158	ENSMUSG00000027518	1700021F07Rik	-	RIKEN cDNA 1700021F07 gene	protein-coding
unique_peak1-3444-14-4-1.57728806547028-2.4322161449009	chr19	7311187	7311799	+	0	NA	intron (NM_027643, intron 1 of 7)	intron (NM_027643, intron 1 of 7)	4219	NM_027643	70999	Mm.329605	NM_027643	ENSMUSG00000024764	Naa40	4931433E08Rik|AU023197|Nat11	N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	protein-coding
common_peak1-8672-17-27--0.589058583852566-0.604689589251113	chr10	128821648	128822398	+	0	NA	Intergenic	Intergenic	-2668	NM_146729	258724	Mm.377657	NM_146729	ENSMUSG00000094347	Olfr784	MOR110-3	olfactory receptor 784	protein-coding
unique_peak2-32469-0-6--3.64748585253182-1.56314192529759	chr1	23903587	23903936	+	0	NA	intron (NM_028534, intron 1 of 9)	intron (NM_028534, intron 1 of 9)	12814	NR_110972	98366	Mm.329963	NM_028534	ENSMUSG00000026155	Smap1	1700056O10Rik|4921514B13Rik|4921525H11Rik|AI462175	small ArfGAP 1	protein-coding
common_peak2-31590-34-34-0.2527855100563-0.484230028934922	chr8	121187141	121188330	+	0	NA	intron (NM_019707, intron 2 of 13)	intron (NM_019707, intron 2 of 13)	380080	NM_019707	12554	Mm.334841	NM_019707	ENSMUSG00000031841	Cdh13	4932416G01Rik|Cdht|T-cadherin|Tcad	cadherin 13	protein-coding
common_peak1-15187-8-7-0.00522241794757061-1.00793137938329	chr3	152714303	152714660	+	0	NA	Intergenic	RMER16|LTR|ERVK	-69310	NM_012028	26938	Mm.40915	NM_012028		St6galnac5	AI851940|Siat7e	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	protein-coding
unique_peak2-34371-4-6--0.830815435910851-0.989110657569874	chr13	110877878	110878257	+	0	NA	intron (NM_023852, intron 3 of 4)	L1Md_F2|LINE|L1	184050	NR_035442	100316683		NR_035442		Mir1904	Mirn1904|mmu-mir-1904	microRNA 1904	ncRNA
common_peak1-10656-32-54--0.502267694305-0.828688081372012	chr14	47649027	47650362	+	0	NA	intron (NM_028966, intron 3 of 11)	L1_Mus1|LINE|L1	28679	NM_001163433	74480	Mm.214454	NM_028966	ENSMUSG00000021838	Samd4	1700024G08Rik|1700111L17Rik|4933436G17Rik|Samd4a|Smaug|Smaug1	sterile alpha motif domain containing 4	protein-coding
common_peak1-8615-61-117--0.499893719612501-1.56225748717905	chr10	116580580	116582327	+	0	NA	intron (NM_177798, intron 1 of 9)	intron (NM_177798, intron 1 of 9)	4077	NM_177798	327826	Mm.135965	NM_177798	ENSMUSG00000020170	Frs2	4732458E18|C330018A15Rik|Frs2alpha|SNT1	fibroblast growth factor receptor substrate 2	protein-coding
unique_peak2-38093-7-5-0.214128329577033-1.01466476204226	chr6	57534864	57535306	+	0	NA	intron (NM_025992, intron 3 of 22)	L1_Rod|LINE|L1	4099	NM_025992	67138	Mm.297393	NM_025992	ENSMUSG00000029798	Herc6	1700121D12Rik|2510038N07Rik|4930427L17Rik|AI451296|CEB1|Herc5	hect domain and RLD 6	protein-coding
unique_peak2-38082-0-11--4.42509343119537-2.83420869758413	chr6	52474543	52475219	+	0	NA	Intergenic	Intergenic	32436	NR_046049	74304	Mm.490579	NR_046049		1700094M24Rik	-	RIKEN cDNA 1700094M24 gene	ncRNA
unique_peak2-39163-5-7--0.704380336005853-1.01466476204226	chr8	92364633	92364954	+	0	NA	Intergenic	L1Md_F2|LINE|L1	507358	NM_172913	244579	Mm.302755	NM_172913	ENSMUSG00000043668	Tox3	500-9|BC052044|C230068E13|CAGF9|Tnrc9	TOX high mobility group box family member 3	protein-coding
common_peak1-18694-22-34--0.481998911857562-0.600314449189972	chr8	121107541	121108449	+	0	NA	intron (NM_019707, intron 2 of 13)	ORR1E|LTR|MaLR	300340	NM_019707	12554	Mm.334841	NM_019707	ENSMUSG00000031841	Cdh13	4932416G01Rik|Cdht|T-cadherin|Tcad	cadherin 13	protein-coding
common_peak1-12373-43-33-0.695100344273364-1.50810240303318	chr17	65663228	65664773	+	0	NA	intron (NM_001289485, intron 14 of 15)	L1_Mus1|LINE|L1	226122	NM_001008973	381107	Mm.141275	NM_001008973	ENSMUSG00000045036	Tmem232	E130009J12Rik|Gm940|Tes13-L|Tes13-S	transmembrane protein 232	protein-coding
common_peak1-18404-28-30-0.0987628094345876-0.332062764479303	chr8	72161312	72162003	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-12210	NM_172754	234362	Mm.458487	NM_172754	ENSMUSG00000060427	Zfp868	AI449175|AW108241|C530032E20|mszf62	zinc finger protein 868	protein-coding
unique_peak2-39505-11-10-0.0492619656143161-0.31137425193576	chr9	63132434	63132965	+	0	NA	intron (NM_011840, intron 12 of 21)	intron (NM_011840, intron 12 of 21)	92960	NM_011840	23938	Mm.325746	NM_011840	ENSMUSG00000058444	Map2k5	AI324775|AI428457|MEK5|Mapkk5|Prkmk5	mitogen-activated protein kinase kinase 5	protein-coding
common_peak2-22006-32-44--0.212761077110015-0.36647540798597	chr12	55820383	55821366	+	0	NA	Intergenic	ID_B1|SINE|B4	-24022	NM_025456	66266	Mm.156440	NM_025456	ENSMUSG00000054302	Eapp	1810011O16Rik	E2F-associated phosphoprotein	protein-coding
common_peak2-25683-4-4--0.345388608740609-0.864171920961574	chr19	12006132	12006473	+	0	NA	intron (NM_172635, intron 11 of 18)	intron (NM_172635, intron 11 of 18)	8084	NR_105960	102465601		NR_105960		Mir6994	mmu-mir-6994	microRNA mir-6994	ncRNA
unique_peak2-37040-15-40--1.34538725406243-2.60849961611299	chr3	132949320	132950747	+	0	NA	Intergenic	Intergenic	-23041	NM_001293641	74776	Mm.210305	NM_146141	ENSMUSG00000028013	Ppa2	1110013G13Rik|Sid6306	pyrophosphatase (inorganic) 2	protein-coding
common_peak2-28711-15-19--0.309763344331706-0.356936432242222	chr5	34949385	34950190	+	0	NA	intron (NM_001024458, intron 4 of 14)	intron (NM_001024458, intron 4 of 14)	29976	NM_026660	68294	Mm.34564	NM_026660	ENSMUSG00000001082	Mfsd10	0610009O03Rik|Tetran	major facilitator superfamily domain containing 10	protein-coding
common_peak1-17771-37-52--0.20192738307738-0.380848279231604	chr7	92668774	92669914	+	0	NA	Intergenic	Intergenic	48254	NM_001105183	670940	Mm.469908	NM_001105183	ENSMUSG00000090806	Vmn2r70	EG620835	vomeronasal 2, receptor 70	protein-coding
unique_peak1-2046-22-4-2.32535601020004-3.9780981129625	chr15	27423618	27424458	+	0	NA	intron (NM_020332, intron 1 of 11)	intron (NM_020332, intron 1 of 11)	27606	NM_020332	11732	Mm.265264	NM_020332	ENSMUSG00000022265	Ank	Ankh|D15Ertd221e|ank|mKIAA1581	progressive ankylosis	protein-coding
common_peak2-25175-11-18--0.739233929191972-0.671582559449692	chr18	54986332	54987057	+	0	NA	Intergenic	Intergenic	163140	NM_175751	269023	Mm.192984	NM_175751	ENSMUSG00000052713	Zfp608	4932417D18Rik|D430007A19Rik|Znf608	zinc finger protein 608	protein-coding
common_peak1-11842-18-30--0.641277159158523-0.738267116931589	chr16	87495154	87495814	+	0	NA	promoter-TSS (NR_040375)	promoter-TSS (NR_040375)	630	NM_009840	12469	Mm.328673	NM_009840	ENSMUSG00000025613	Cct8	AI132397|Cctq|Tcpq	chaperonin containing Tcp1, subunit 8 (theta)	protein-coding
unique_peak1-1133-13-4-1.45654393575041-2.23384849113406	chr11	95809464	95810124	+	0	NA	Intergenic	RMER19B|LTR|ERVK	14903	NR_037223	100526468		NR_037223	miRBase:MI0014025	Mir3063	mmu-mir-3063	microRNA 3063	ncRNA
unique_peak2-33646-6-6--0.241956811677302-0.947717972411649	chr11	98951520	98951928	+	0	NA	Intergenic	Intergenic	-1104	NM_172564	217169	Mm.262067	NM_172564	ENSMUSG00000017607	Tns4	9930017A07Rik|AA589547|AU016405|Cten	tensin 4	protein-coding
unique_peak2-35651-5-16--1.79184317725619-1.61682445937017	chr18	77938193	77938917	+	0	NA	intron (NM_178670, intron 1 of 4)	B1F2|SINE|Alu	14194	NM_178670	212163	Mm.23293	NM_178670	ENSMUSG00000047466	8030462N17Rik	Akd2|Ark2N	RIKEN cDNA 8030462N17 gene	protein-coding
common_peak2-30960-19-19-0.0807592317743238-0.322753776620787	chr8	94601043	94601733	+	0	NA	Intergenic	Intergenic	-275835	NM_008393	16373	Mm.238044	NM_008393	ENSMUSG00000031734	Irx3	AI894186	Iroquois related homeobox 3	protein-coding
common_peak2-19640-23-25-0.0213277863679888-0.30528805757448	chr1	42851090	42851911	+	0	NA	Intergenic	L1MB1|LINE|L1	-56578	NM_023514	69527	Mm.252982	NM_023514	ENSMUSG00000060679	Mrps9	2310002A08Rik|AW322516|Mrp-S9|S9mt|mg637	mitochondrial ribosomal protein S9	protein-coding
common_peak2-32204-19-42--1.02357742804041-1.85054049304327	chr9	120127743	120128488	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	69255	NM_001039364	17433	Mm.486167	NM_008614	ENSMUSG00000032517	Mobp	AI835053|AI839848|MOBP155|MOBP170|MOBP69|MOBP73|MOBP81|R74645	myelin-associated oligodendrocytic basic protein	protein-coding
common_peak1-7707-69-94-0.0252868389277845-0.311262485365833	chr1	86470880	86473381	+	0	NA	Intergenic	Intergenic	1023255	NM_030194	109032	Mm.335802	NM_030194	ENSMUSG00000070034	Sp110	5031415C07Rik|52kDa|5830484A20Rik|ENSMUSG00000075603|Ifi75|Ipr1	Sp110 nuclear body protein	protein-coding
unique_peak1-4024-25-9-1.53992181045774-2.70611768348013	chr2	45455204	45456442	+	0	NA	Intergenic	Intergenic	-96302	NR_040497	69405	Mm.396184	NR_040497	ENSMUSG00000086202	1700019E08Rik	-	RIKEN cDNA 1700019E08 gene	ncRNA
unique_peak2-32564-1-5--2.2120195109379-1.32905871926422	chr1	79714507	79714935	+	0	NA	intron (NM_001111279, intron 6 of 11)	intron (NM_001111279, intron 6 of 11)	43623	NM_001111279	69368	Mm.293273	NM_027057	ENSMUSG00000073643	Wdfy1	1700013B03Rik|1700120F24Rik|FENS-1|Jr1|WDF1|ZFYVE17|mKIAA1435	WD repeat and FYVE domain containing 1	protein-coding
common_peak1-18268-43-21-1.32313156688641-3.72402976438215	chr8	34814036	34815870	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-27433	NM_001167921	68153	Mm.286104	NM_026584	ENSMUSG00000031585	Gtf2e2	34kDa|AI462509|C330006J08Rik	general transcription factor II E, polypeptide 2 (beta subunit)	protein-coding
common_peak2-20647-22-31--0.352715894912595-0.440892966163086	chr10	81266616	81267039	+	0	NA	Intergenic	Intergenic	-8104	NM_001142963	100233208	Mm.327168	NM_001142963		Gm10778	ENSMUSG00000074860	predicted gene 10778	protein-coding
common_peak2-25945-14-6-1.09186123830004-1.16633110333236	chr19	47090756	47091153	+	0	NA	intron (NM_146100, intron 1 of 2)	intron (NM_146100, intron 1 of 2)	-1275	NM_001164363	76952	Mm.40965	NM_029810	ENSMUSG00000025041	Nt5c2	2010002I23Rik|CnII|ENSMUSG00000025039|Gm9751|Gmp|Nt5b|Pnt5|cN-II	5'-nucleotidase, cytosolic II	protein-coding
common_peak2-21954-14-13-0.0918612383000403-0.332077462497413	chr12	32820419	32821121	+	0	NA	Intergenic	Intergenic	72433	NM_001146201	30955	Mm.101369	NM_020272	ENSMUSG00000020573	Pik3cg	5830428L06Rik|PI3Kgamma|p110gamma	phosphoinositide-3-kinase, catalytic, gamma polypeptide	protein-coding
common_peak1-16810-56-87--0.223835793198054-0.494226669520052	chr6	47771893	47773227	+	0	NA	intron (NM_177882, intron 3 of 3)	intron (NM_177882, intron 3 of 3)	7944	NM_177882	330301	Mm.128149	NM_177882	ENSMUSG00000051499	Zfp786	A730012O14Rik|Znf786	zinc finger protein 786	protein-coding
unique_peak2-34773-11-14--0.398197011356905-0.379391706698377	chr15	59540596	59541267	+	0	NA	Intergenic	Intergenic	60722	NM_144549	211770	Mm.40298	NM_144549	ENSMUSG00000032501	Trib1	A530090O15Rik|TRB-1|Trb1	tribbles homolog 1 (Drosophila)	protein-coding
unique_peak1-1036-18-8-1.14299414978604-1.45476480588849	chr11	76589415	76590119	+	0	NA	TTS (NM_007754)	TTS (NM_007754)	-12710	NM_016810	53334	Mm.20931	NM_016810	ENSMUSG00000010392	Gosr1	AI414660|AI426320|BB145494|GOS-28|GOSRI|GS28	golgi SNAP receptor complex member 1	protein-coding
unique_peak1-1377-14-5-1.31425365963649-1.4372489031793	chr12	52005833	52006662	+	0	NA	Intergenic	RLTR15|LTR|ERVK	-256037	NM_008858	18760	Mm.133719	NM_008858	ENSMUSG00000002688	Prkd1	PKD|PKD1|Pkcm|Prkcm	protein kinase D1	protein-coding
common_peak2-31595-11-40--1.84885842036647-4.10519998339124	chr8	121652405	121652858	+	0	NA	intron (NM_019707, intron 7 of 13)	intron (NM_019707, intron 7 of 13)	-215807	NM_024219	68196	Mm.358714	NM_024219	ENSMUSG00000031839	Hsbp1	0610007A03Rik|AA408769|Hsp25	heat shock factor binding protein 1	protein-coding
unique_peak1-7257-10-0-3.35641534500877-3.31132995230379	chr9	88242640	88243261	+	0	NA	intron (NM_011851, intron 1 of 8)	B1_Mur1|SINE|Alu	20503	NM_011851	23959	Mm.244235	NM_011851	ENSMUSG00000032420	Nt5e	2210401F01Rik|AI447961|CD73|NT|Nt5|eNT	5' nucleotidase, ecto	protein-coding
unique_peak2-36408-4-7--1.02346051385325-1.09384600808989	chr2	127070712	127071139	+	0	NA	intron (NM_025296, intron 5 of 6)	intron (NM_025296, intron 5 of 6)	2627	NM_025296	26371	Mm.45179	NM_025296	ENSMUSG00000003662	Ciao1	AW210570|Wdr39	cytosolic iron-sulfur protein assembly 1	protein-coding
unique_peak2-35365-4-12--1.72390023199434-1.85743853830261	chr17	26973175	26973506	+	0	NA	Intergenic	Intergenic	5170	NM_008700	18091	Mm.41974	NM_008700	ENSMUSG00000015579	Nkx2-5	Csx|Nkx-2.5|Nkx2.5|tinman	NK2 homeobox 5	protein-coding
common_peak2-25938-51-46-0.520334973924935-1.1534274303752	chr19	46983225	46984365	+	0	NA	intron (NM_029810, intron 3 of 17)	intron (NM_029810, intron 3 of 17)	53046	NM_029810	76952	Mm.40965	NM_029810	ENSMUSG00000025041	Nt5c2	2010002I23Rik|CnII|ENSMUSG00000025039|Gm9751|Gmp|Nt5b|Pnt5|cN-II	5'-nucleotidase, cytosolic II	protein-coding
unique_peak1-2470-10-0-3.35641534500877-3.31132995230379	chr16	55393888	55394455	+	0	NA	Intergenic	L1ME2|LINE|L1	-110821	NM_178720	239852	Mm.245045	NM_178720	ENSMUSG00000064310	Zpld1	9430016A21Rik	zona pellucida like domain containing 1	protein-coding
common_peak1-13399-42-13-1.93497440580958-6.15355453462454	chr19	47330247	47331665	+	0	NA	intron (NM_021360, intron 4 of 5)	intron (NM_021360, intron 4 of 5)	17123	NR_105961	102466782		NR_105961		Mir6995	mmu-mir-6995	microRNA mir-6995	ncRNA
common_peak2-19932-13-10-0.319040412000471-0.446472590016315	chr1	127291089	127291597	+	0	NA	intron (NM_001205385, intron 12 of 12)	intron (NM_001205385, intron 12 of 12)	40961	NM_023735	74117	Mm.183102	NM_023735	ENSMUSG00000026341	Actr3	1200003A09Rik|Arp3	ARP3 actin-related protein 3	protein-coding
unique_peak1-7332-8-4-0.683294323060208-1.21878474469819	chr9	123305321	123305852	+	0	NA	intron (NM_153168, intron 5 of 20)	intron (NM_153168, intron 5 of 20)	29528	NM_153168	102436	Mm.276076	NM_153168	ENSMUSG00000035202	Lars2	AI035546|Kiaa0028|LEURS	leucyl-tRNA synthetase, mitochondrial	protein-coding
common_peak1-13474-13-7-0.778472030637769-0.817533494790411	chr2	169607154	169607722	+	0	NA	intron (NM_080455, intron 1 of 1)	intron (NM_080455, intron 1 of 1)	148292	NM_080455	228911	Mm.315789	NM_080455	ENSMUSG00000047907	Tshz2	2900073F20Rik|B830045G17|Mtsh2|Sdccag33l|Tsh2|Zfp218|mKIAA4248|teashirt2	teashirt zinc finger family member 2	protein-coding
unique_peak2-33849-5-8--0.874305337448166-1.10484139239135	chr12	17001707	17002308	+	0	NA	intron (NM_172574, intron 4 of 6)	intron (NM_172574, intron 4 of 6)	4917	NM_172574	217430	Mm.379451	NM_172574	ENSMUSG00000045679	Pqlc3	C78076|E030024M05Rik	PQ loop repeat containing	protein-coding
common_peak1-16717-14-12-0.198776442216552-0.373562084705529	chr6	29432799	29433624	+	0	NA	intron (NM_001029985, intron 36 of 37)	PB1D10|SINE|Alu	11774	NM_001145360	668210	Mm.420607	NM_001145360	ENSMUSG00000090685	Gm9047	EG668210	predicted gene 9047	protein-coding
unique_peak1-5142-10-1-2.35641534500877-2.57096726280955	chr5	13959205	13959787	+	0	NA	Intergenic	Intergenic	-65780	NM_011348	20349	Mm.134093	NM_011348	ENSMUSG00000063531	Sema3e	6430702L12|AA408817|Semah|mKIAA0331	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E	protein-coding
common_peak2-26156-40-75--0.588951830692487-1.29979449988493	chr2	18046749	18048529	+	0	NA	intron (NR_045538, intron 7 of 22)	intron (NR_045538, intron 7 of 22)	61427	NM_001252561	17354	Mm.209175	NM_010804	ENSMUSG00000026743	Mllt10	Af10|B130021D15Rik|D630001B22Rik|mKIAA4140	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	protein-coding
common_peak2-30994-11-8-0.338768582809301-1.14218153353838	chr8	7908818	7909244	+	0	NA	Intergenic	Intergenic	751742	NM_010111	13642	Mm.209813	NM_010111	ENSMUSG00000001300	Efnb2	ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1	ephrin B2	protein-coding
unique_peak2-33113-2-11--2.50241675698448-2.32232533660526	chr10	81183071	81183586	+	0	NA	exon (NM_001243067, exon 4 of 4)	exon (NM_001243067, exon 4 of 4)	15758	NM_001243067	73610	Mm.490466	NM_001243067		Zfp433	1700123A16Rik	RIKEN cDNA 1700123A16 gene	protein-coding
common_peak2-30357-14-19--0.422711934529718-0.403453972741636	chr7	28179411	28180011	+	0	NA	promoter-TSS (NM_001199235)	promoter-TSS (NM_001199235)	-186	NM_001199235	80297	Mm.459123	NM_032610	ENSMUSG00000011751	Sptbn4	1700022P15Rik|5830426A08Rik|ROSA62|SpbIV|Spnb4|dyn|lnd|nmf261|nmf379|qv	spectrin beta, non-erythrocytic 4	protein-coding
common_peak2-20619-8-9--0.316705676939792-1.03275496310833	chr10	80162389	80162887	+	0	NA	intron (NM_172457, intron 1 of 3)	B1F|SINE|Alu	1927	NM_172457	208228	Mm.49309	NM_172457	ENSMUSG00000003348	Mob3a	5330417K06Rik|A630029F06|AV218468|Mobkl2a	MOB kinase activator 3A	protein-coding
unique_peak1-5513-11-3-1.50869358425161-1.95434855131066	chr5	137610026	137610610	+	0	NA	Intergenic	Intergenic	-18241	NM_201373	384309	Mm.100647	NM_201373		Trim56	A130009K11Rik|Gm452|RNF109	tripartite motif-containing 56	protein-coding
unique_peak2-37708-3-11--1.99894559068043-1.95434855131066	chr5	104019846	104020454	+	0	NA	exon (NM_011204, exon 45 of 48)	exon (NM_011204, exon 45 of 48)	38272	NM_029415	75750	Mm.7446	NM_029415	ENSMUSG00000029321	Slc10a6	8430417G17Rik|C78479|Soat	solute carrier family 10 (sodium/bile acid cotransporter family), member 6	protein-coding
common_peak2-30390-8-10--0.454209200689727-1.078512453669	chr7	30280475	30280875	+	0	NA	intron (NM_001081028, intron 2 of 22)	B1_Mur4|SINE|Alu	9804	NM_001081028	74206	Mm.447042	NM_001081028	ENSMUSG00000030583	Sipa1l3	2610511M17Rik	signal-induced proliferation-associated 1 like 3	protein-coding
unique_peak2-38779-6-10--0.894033508256995-1.21398586181642	chr7	127841964	127842502	+	0	NA	intron (NM_001164580, intron 1 of 2)	L1MB8|LINE|L1	21099	NM_001164580	233812	Mm.276479	NM_001164580	ENSMUSG00000046096	BC030336	-	cDNA sequence BC030336	protein-coding
unique_peak2-34676-8-11--0.579740082773585-1.14218153353838	chr15	7877537	7878045	+	0	NA	intron (NM_001081402, intron 10 of 17)	L1Md_T|LINE|L1	112241	NM_001301357	14573	Mm.4679	NM_010275	ENSMUSG00000022144	Gdnf	AI385739	glial cell line derived neurotrophic factor	protein-coding
unique_peak1-4648-13-7-0.778472030637769-0.817533494790411	chr3	88595111	88595694	+	0	NA	intron (NR_028359, intron 4 of 17)	intron (NR_028359, intron 4 of 17)	14423	NR_028359	100302730	Mm.482358	NR_028359		5830417I10Rik	3632445O20Rik|AA387005	gon-4-like pseudogene	pseudo
common_peak1-16043-30-28-0.311694414364301-0.518746288394487	chr5	36795983	36796987	+	0	NA	Intergenic	Intergenic	-11349	NM_024478	17713	Mm.21535	NM_024478	ENSMUSG00000029198	Grpel1	AA408748|mt-GrpE#1|mt-Grpel1	GrpE-like 1, mitochondrial	protein-coding
unique_peak1-6131-7-4-0.477162735410827-1.09384600808989	chr6	134090152	134090631	+	0	NA	intron (NM_007961, intron 2 of 7)	MIR|SINE|MIR	104666	NM_007961	14011	Mm.269995	NM_007961	ENSMUSG00000030199	Etv6	AW123102|AW557856|Tel	ets variant 6	protein-coding
unique_peak1-1538-26-9-1.6059709972711-2.89150037906958	chr13	18309457	18310405	+	0	NA	intron (NM_175006, intron 3 of 7)	intron (NM_175006, intron 3 of 7)	-117895	NR_046032	73992	Mm.159110	NR_046032		4930448F12Rik	-	RIKEN cDNA 4930448F12 gene	ncRNA
common_peak1-8353-42-30-0.788133017480309-1.81099027427053	chr10	57794206	57795587	+	0	NA	intron (NM_026148, intron 1 of 9)	L1_Rod|LINE|L1	8682	NM_026148	110829	Mm.57734	NM_026148	ENSMUSG00000019920	Lims1	2310016J22Rik|4921524A02Rik|AI507642|AU021743|AW551584|C430041B13Rik|Lims1l|PINCH|PINCH1	LIM and senescent cell antigen-like domains 1	protein-coding
common_peak2-32176-33-14-1.42444696691701-3.13557888369249	chr9	111648245	111648852	+	0	NA	Intergenic	Intergenic	-55828	NM_016853	20840	Mm.1414	NM_016853	ENSMUSG00000032502	Stac	-	src homology three (SH3) and cysteine rich domain	protein-coding
unique_peak1-3802-12-5-1.06381348436648-1.78669045979184	chr19	60860910	60861602	+	0	NA	intron (NM_010123, intron 1 of 21)	intron (NM_010123, intron 1 of 21)	5340	NM_010123	13669	Mm.2238	NM_010123	ENSMUSG00000024991	Eif3a	A830012B05Rik|Csma|Eif3|Eif3s10|mKIAA0139	eukaryotic translation initiation factor 3, subunit A	protein-coding
common_peak1-9454-13-11-0.193509529916613-0.379391706698377	chr11	103262311	103262944	+	0	NA	intron (NM_183034, intron 2 of 11)	L1MB7|LINE|L1	11351	NM_183034	353047	Mm.383308	NM_183034	ENSMUSG00000034247	Plekhm1	AP162|B2|BC038943|D330036J23Rik	pleckstrin homology domain containing, family M (with RUN domain) member 1	protein-coding
unique_peak1-6567-10-1-2.35641534500877-2.57096726280955	chr7	133162870	133163500	+	0	NA	intron (NM_001101488, intron 2 of 6)	intron (NM_001101488, intron 2 of 6)	62740	NM_001101488	269994	Mm.39599	NM_001101488	ENSMUSG00000046182	Gsg1l	AI852434|C230098I05Rik|G630023A01Rik|Gm637|g1l	GSG1-like	protein-coding
unique_peak2-35084-7-9--0.522837264589173-1.05908390183068	chr16	17732198	17732857	+	0	NA	Intergenic	MTEa|LTR|MaLR	-9487	NM_001040683	94112	Mm.208970	NM_033609	ENSMUSG00000012114	Med15	A230074L19Rik|AW536074|Pcqap|mPcqap	mediator complex subunit 15	protein-coding
common_peak1-17584-12-15--0.351224014912361-0.332077462497413	chr7	39552221	39552814	+	0	NA	Intergenic	Intergenic	-239305	NM_001013810	434171	Mm.60990	NM_001013810	ENSMUSG00000060565	Gm5591	EG434171	predicted gene 5591	protein-coding
common_peak2-31617-57-65-0.221638920720475-0.521498497621986	chr8	123042511	123043584	+	0	NA	intron (NM_198671, intron 1 of 15)	intron (NM_198671, intron 1 of 15)	-16710	NM_001145897	382034	Mm.334856	NM_198671	ENSMUSG00000031822	Gse1	2210013I18Rik|mKIAA0182	genetic suppressor element 1	protein-coding
unique_peak1-5510-14-7-0.899216160357645-0.947446088118041	chr5	136533199	136533823	+	0	NA	intron (NM_027158, intron 1 of 5)	intron (NM_027158, intron 1 of 5)	374	NM_027158	69665	Mm.75713	NM_027158	ENSMUSG00000006143	Upk3bl	2310043J07Rik	uroplakin 3B-like	protein-coding
unique_peak1-5747-18-0-4.31291915122835-NA	chr6	49424110	49424969	+	0	NA	Intergenic	Intergenic	78936	NM_029916	77485	Mm.128054	NM_029916	ENSMUSG00000023403	Stk31	C330007K24Rik	serine threonine kinase 31	protein-coding
common_peak2-29282-19-56--1.43020268750305-3.88568852526896	chr5	143314162	143315451	+	0	NA	intron (NM_001122730, intron 16 of 18)	intron (NM_001122730, intron 16 of 18)	-25572	NM_009362	21784	Mm.2854	NM_009362	ENSMUSG00000024032	Tff1	Bcei|PS2	trefoil factor 1	protein-coding
unique_peak2-36481-13-14--0.12841856497075-0.301029995663977	chr2	150840041	150840962	+	0	NA	Intergenic	PB1D10|SINE|Alu	-5367	NM_207204	78177	Mm.120911	NM_207204	ENSMUSG00000068115	Ninl	4930519N13Rik|Gm1004|Gm1634|mKIAA0980	ninein-like	protein-coding
common_peak2-30230-29-15-1.11229008061511-2.08778000015696	chr7	4169716	4170375	+	0	NA	Intergenic	L1M4|LINE|L1	-19311	NM_001081239	232801	Mm.258061	NM_001081239	ENSMUSG00000070873	Lilra5	E030017K20|EG232801|Gm4878|Lilrc1	leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5	protein-coding
common_peak2-19759-17-16-0.130833496954699-0.356936432242225	chr1	77538809	77539598	+	0	NA	Intergenic	Intergenic	-27540	NM_007936	13838	Mm.400747	NM_007936	ENSMUSG00000026235	Epha4	2900005C20Rik|AI385584|Cek8|Hek8|Sek|Sek1|Tyro1|rb	Eph receptor A4	protein-coding
common_peak2-24546-16-25--0.58217607587303-0.633951497070961	chr17	27908968	27909870	+	0	NA	intron (NM_001033279, intron 3 of 4)	intron (NM_001033279, intron 3 of 4)	-43523	NM_013891	30051	Mm.26768	NM_013891	ENSMUSG00000024215	Spdef	PDEF|Pse	SAM pointed domain containing ets transcription factor	protein-coding
unique_peak2-39148-8-10--0.454209200689727-1.078512453669	chr8	86923684	86924193	+	0	NA	Intergenic	Intergenic	-15325	NM_001252060	12286	Mm.334658	NM_007578	ENSMUSG00000034656	Cacna1a	APCA|BI|Caca1a|Cacnl1a4|Cav2.1|Ccha1a|EA2|FHM|HPCA|MHP|MHP1|SCA6|alpha1A|la|nmf352|rkr|tg	calcium channel, voltage-dependent, P/Q type, alpha 1A subunit	protein-coding
common_peak2-32023-16-19--0.203664452619301-0.325169893479371	chr9	75625328	75626167	+	0	NA	intron (NM_007555, intron 1 of 6)	intron (NM_007555, intron 1 of 6)	2575	NM_007555	12160	Mm.428950	NM_007555		Bmp5	AU023399|se	bone morphogenetic protein 5	protein-coding
common_peak2-25586-59-53-0.57047649870911-1.49957121854836	chr19	7382068	7383106	+	0	NA	intron (NM_007928, intron 1 of 17)	intron (NM_007928, intron 1 of 17)	-12650	NM_001080390	13728	Mm.258986	NM_007928	ENSMUSG00000024969	Mark2	EMK-1|Emk|Par-1|Par-1b	MAP/microtubule affinity-regulating kinase 2	protein-coding
common_peak1-12581-27-31--0.00845404910476422-0.304476922018591	chr18	12948949	12949460	+	0	NA	intron (NM_001252490, intron 3 of 13)	intron (NM_001252490, intron 3 of 13)	29212	NR_045524	64291	Mm.259470	NM_020573	ENSMUSG00000044252	Osbpl1a	G430090F17Rik|Gm753|ORP-1|Osbpl1b	oxysterol binding protein-like 1A	protein-coding
common_peak2-29022-14-21--0.560215458279653-0.519193887192484	chr5	113157075	113157751	+	0	NA	intron (NM_028901, intron 39 of 43)	intron (NM_028901, intron 39 of 43)	-64899	NR_040675	67360	Mm.59218	NR_040675	ENSMUSG00000098230	1700095B10Rik	-	RIKEN cDNA 1700095B10 gene	ncRNA
unique_peak2-38479-5-7--0.704380336005853-1.01466476204226	chr7	30563311	30563711	+	0	NA	3' UTR (NM_023750, exon 5 of 5)	3' UTR (NM_023750, exon 5 of 5)	5198	NR_035490	100316711		NR_035490		Mir1964	mmu-mir-1964	microRNA 1964	ncRNA
unique_peak2-34640-7-6--0.00826409175941478-0.97990265578305	chr14	99623328	99623745	+	0	NA	intron (NM_029320, intron 16 of 17)	intron (NM_029320, intron 16 of 17)	-74374	NM_009769	12224	Mm.30262	NM_009769	ENSMUSG00000005148	Klf5	4930520J07Rik|Bteb2|CKLF|IKLF	Kruppel-like factor 5	protein-coding
unique_peak2-33903-4-34--3.15274353079821-6.186916304205	chr12	54774599	54775769	+	0	NA	intron (NM_013780, intron 4 of 11)	intron (NM_013780, intron 4 of 11)	425520	NM_013780	27386	Mm.247044	NM_013780	ENSMUSG00000021010	Npas3	4930423H22Rik|bHLHe12	neuronal PAS domain protein 3	protein-coding
common_peak2-21744-23-36--0.48768586111987-0.652802052802678	chr11	115708015	115708641	+	0	NA	exon (NM_145438, exon 7 of 26)	exon (NM_145438, exon 7 of 26)	22956	NM_001252532	217325	Mm.290450	NM_145438	ENSMUSG00000020782	Llgl2	9130006H11Rik|Llglh2	lethal giant larvae homolog 2 (Drosophila)	protein-coding
common_peak1-8509-40-63--0.341024317248902-0.575830045570394	chr10	82763200	82764131	+	0	NA	intron (NM_177388, intron 5 of 10)	ID_B1|SINE|B4	36897	NM_177388	338365	Mm.67073	NM_177388	ENSMUSG00000034591	Slc41a2	A230035L05Rik|SLC41A1-L1	solute carrier family 41, member 2	protein-coding
common_peak1-9178-8-6-0.197867495889966-1.03789460276074	chr11	78368665	78369120	+	0	NA	Intergenic	Intergenic	-4655	NM_133706	69071	Mm.29431	NM_133706	ENSMUSG00000037278	Tmem97	1810014L12Rik|AI115531|AL022956|D11Bhm182e	transmembrane protein 97	protein-coding
unique_peak1-6178-15-12-0.311725032414564-0.425539671739611	chr6	145881807	145882638	+	0	NA	promoter-TSS (NM_010656)	promoter-TSS (NM_010656)	-445	NM_010656	16651	Mm.49689	NM_010656	ENSMUSG00000030255	Sspn	Krag	sarcospan	protein-coding
common_peak1-8552-41-25-1.00070898670757-2.40122790931992	chr10	93422545	93424368	+	0	NA	Intergenic	Intergenic	3152	NR_029764	723908		NR_029764	miRBase:MI0000609	Mir331	Mirn331|mmu-mir-331	microRNA 331	ncRNA
common_peak1-15007-26-17-0.75797409071615-1.09210977391291	chr3	109155369	109156860	+	0	NA	intron (NM_020505, intron 1 of 26)	intron (NM_020505, intron 1 of 26)	12513	NM_020505	57257	Mm.282257	NM_020505	ENSMUSG00000033721	Vav3	A530094I06Rik|AA986410|Idd18.1	vav 3 oncogene	protein-coding
unique_peak2-32544-6-32--2.47899600897815-4.54209996799533	chr1	71652292	71653194	+	0	NA	intron (NM_001276413, intron 29 of 43)	intron (NM_001276413, intron 29 of 43)	47065	NM_010233	14268	Mm.193099	NM_010233	ENSMUSG00000026193	Fn1	E330027I09|Fn|Fn-1	fibronectin 1	protein-coding
common_peak1-12432-10-8-0.186490343566457-1.078512453669	chr17	78400270	78400984	+	0	NA	Intergenic	Intergenic	-198961	NM_015800	50766	Mm.311912	NM_015800	ENSMUSG00000024074	Crim1	AU015004	cysteine rich transmembrane BMP regulator 1 (chordin like)	protein-coding
common_peak2-25366-15-8-0.842239749113344-0.891319708951327	chr18	82493855	82494391	+	0	NA	Intergenic	Lx9|LINE|L1	82046	NM_008082	14427	Mm.6219	NM_008082	ENSMUSG00000024553	Galr1	Galnr1	galanin receptor 1	protein-coding
common_peak1-13049-12-19--0.673152109799724-0.546772548767014	chr19	5817571	5818040	+	0	NA	Intergenic	Intergenic	-15134	NR_002847	72289	Mm.298256	NR_002847	ENSMUSG00000092341	Malat1	2210401K01Rik|9430072K23Rik|AI647968|Neat2	metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)	ncRNA
unique_peak2-39447-1-5--2.2120195109379-1.32905871926422	chr9	48694793	48695262	+	0	NA	Intergenic	Intergenic	24177	NM_013561	15561	Mm.4831	NM_013561	ENSMUSG00000032269	Htr3a	5-HT3	5-hydroxytryptamine (serotonin) receptor 3A	protein-coding
common_peak1-16283-9-15--0.81038659359578-0.630231561310125	chr5	110780096	110780683	+	0	NA	Intergenic	Intergenic	-2726	NM_001033459	381667	Mm.332572	NM_001033459	ENSMUSG00000072754	Lrcol1	Clpsl3|Gm1679	leucine rich colipase-like 1	protein-coding
common_peak1-18141-20-15-0.488074784591193-0.590343908676236	chr8	10977911	10978897	+	0	NA	Intergenic	Intergenic	-29446	NR_046017	619321	Mm.403007	NR_046017	ENSMUSG00000096938	9530052E02Rik	-	RIKEN cDNA 9530052E02 gene	ncRNA
unique_peak2-32941-1-7--2.62705701021674-1.80617997398389	chr10	39714205	39714687	+	0	NA	Intergenic	Intergenic	-7994	NM_001001489	215928	Mm.31744	NM_001001489	ENSMUSG00000038528	BC021785	Naglt1c	cDNA sequence BC021785	protein-coding
common_peak1-15853-15-14-0.105274154947137-0.330004445983672	chr5	3501086	3501958	+	0	NA	intron (NM_009873, intron 4 of 6)	intron (NM_009873, intron 4 of 6)	-42311	NM_001042501	68152	Mm.240265	NM_026583		Fam133b	2900022K02Rik|5830415L20Rik	family with sequence similarity 133, member B	protein-coding
unique_peak1-5077-8-2-1.42025991722641-1.65811743852845	chr4	141285563	141286056	+	0	NA	Intergenic	MIR|SINE|MIR	-6475	NM_001017966	68817	Mm.393721	NM_001017966		Ddi2	1110056G13Rik|1700027M01Rik|9130022E05Rik|AI604911|AU040698	DNA-damage inducible protein 2	protein-coding
common_peak1-15210-101-141-0.104267117231737-0.407417379201362	chr4	106315525	106317200	+	0	NA	Intergenic	Intergenic	-7312	NM_001285783	230577	Mm.134029	NM_172272	ENSMUSG00000043572	Pars2	BC027073	prolyl-tRNA synthetase (mitochondrial)(putative)	protein-coding
common_peak2-19541-63-102--0.248187936112629-0.559810684948594	chr1	133660319	133661590	+	0	NA	intron (NM_177243, intron 17 of 20)	intron (NM_177243, intron 17 of 20)	20355	NM_177243	320718	Mm.482704	NM_177243	ENSMUSG00000042268	Slc26a9	E030002L01Rik	solute carrier family 26, member 9	protein-coding
common_peak2-20300-8-7-0.00522241794757061-1.00793137938329	chr1	194677336	194677727	+	0	NA	intron (NM_198247, intron 1 of 3)	intron (NM_198247, intron 1 of 3)	410	NM_001177794	214791	Mm.22806	NM_198247	ENSMUSG00000016262	Sertad4	4833404A09|C130018M11Rik	SERTA domain containing 4	protein-coding
common_peak2-24907-18-22--0.210642804828661-0.321718508207525	chr17	84188522	84189263	+	0	NA	intron (NM_001171053, intron 12 of 13)	intron (NM_001171053, intron 12 of 13)	57238	NM_025325	107766	Mm.30100	NM_025325	ENSMUSG00000000673	Haao	0610007K21Rik|0610012J07Rik|3-HAO|3-HAOxase|3HAO	3-hydroxyanthranilate 3,4-dioxygenase	protein-coding
unique_peak1-6631-8-0-3.00522241794757-2.70926996097583	chr8	10871755	10872279	+	0	NA	non-coding (NR_040705, exon 6 of 6)	non-coding (NR_040705, exon 6 of 6)	10437	NR_040705	320014	Mm.403203	NR_040705		B930025P03Rik	-	RIKEN cDNA B930025P03 gene	ncRNA
common_peak1-15110-25-31--0.138150094654894-0.315509160416417	chr3	135211773	135212802	+	0	NA	exon (NM_027288, exon 11 of 17)	exon (NM_027288, exon 11 of 17)	63712	NM_027288	110173	Mm.280536	NM_027288	ENSMUSG00000028164	Manba	2410030O07Rik|B930014J03Rik|Bmn	mannosidase, beta A, lysosomal	protein-coding
unique_peak1-3343-36-12-1.77888136802666-4.71961104764085	chr19	4046267	4047647	+	0	NA	Intergenic	ID_B1|SINE|B4	-4736	NM_181796	14869	Mm.441542	NM_181796	ENSMUSG00000038155	Gstp2	GSTpiA|Gst-3|Gst3	glutathione S-transferase, pi 2	protein-coding
unique_peak2-39779-3-6--1.22133801201688-1.08602067057793	chrX	8074238	8074667	+	0	NA	Intergenic	L1Md_T|LINE|L1	27628	NM_001126491	546263	Mm.475615	NM_001126491	ENSMUSG00000079704	Gm14459	OTTMUSG00000016698	predicted gene 14459	protein-coding
common_peak2-26958-16-13-0.310908720210457-0.417187467413082	chr2	165492731	165493448	+	0	NA	intron (NM_001271962, intron 2 of 15)	intron (NM_001271962, intron 2 of 15)	12291	NM_010165	14049	Mm.282719	NM_010165	ENSMUSG00000017897	Eya2	Eab1	eyes absent 2 homolog (Drosophila)	protein-coding
unique_peak2-36021-3-7--1.41398308995928-1.23214870625617	chr19	41895634	41896044	+	0	NA	Intergenic	Intergenic	-8621	NM_008043	14296	Mm.4573	NM_008043		Frat1	AW060382	frequently rearranged in advanced T cell lymphomas	protein-coding
common_peak2-20392-11-12--0.191746133889479-0.310474156842889	chr10	20091619	20092192	+	0	NA	Intergenic	Intergenic	24280	NM_027930	71804	Mm.262151	NM_027930	ENSMUSG00000019992	Mtfr2	2610016C23Rik|4933412C16Rik|Dufd1|Fam54a	mitochondrial fission regulator 2	protein-coding
unique_peak2-39870-2-7--1.91745425626332-1.45399745587252	chrX	74084517	74084927	+	0	NA	Intergenic	L1Md_T|LINE|L1	-236459	NM_001201395	74987	Mm.107996	NM_001201395	ENSMUSG00000079525	4930468A15Rik	-	RIKEN cDNA 4930468A15 gene	protein-coding
common_peak1-18416-19-38--0.882714892200562-1.37991291380345	chr8	73352703	73353560	+	0	NA	Intergenic	RSINE1|SINE|B4	10488	NM_027560	70807	Mm.24215	NM_027560	ENSMUSG00000002910	Arrdc2	4632416I05Rik|Ilad1	arrestin domain containing 2	protein-coding
common_peak1-11502-8-7-0.00522241794757061-1.00793137938329	chr15	103257866	103258304	+	0	NA	intron (NM_028797, intron 2 of 8)	(TCTA)n|Simple_repeat|Simple_repeat	2773	NM_028797	74174	Mm.325325	NM_028797	ENSMUSG00000022487	Gtsf1	1700006H03Rik|Cue110	gametocyte specific factor 1	protein-coding
common_peak2-20941-12-8-0.478850983645327-0.562038191119709	chr11	8676167	8676602	+	0	NA	Intergenic	Intergenic	-111846	NM_001083587	319939	Mm.337820	NM_001083587	ENSMUSG00000020422	Tns3	BC023928|F830010I22Rik|TEM6|Tens1	tensin 3	protein-coding
common_peak1-19475-47-95--0.650121075954608-1.92313441404633	chrX	135008405	135009530	+	0	NA	intron (NM_030688, intron 5 of 10)	intron (NM_030688, intron 5 of 10)	-264848	NM_026469	67944	Mm.443280	NM_026469	ENSMUSG00000071686	Tex13a	1700025D03Rik	testis expressed 13A	protein-coding
unique_peak2-35369-1-5--2.2120195109379-1.32905871926422	chr17	27371411	27371795	+	0	NA	Intergenic	Intergenic	-30220	NM_146075	224640	Mm.29689	NM_146075	ENSMUSG00000044857	Lemd2	BC026588|Lem2|NET25	LEM domain containing 2	protein-coding
common_peak1-8526-26-15-0.927899092158462-1.40782320807777	chr10	86705601	86706559	+	0	NA	Intergenic	L1_Mus1|LINE|L1	185289	NM_029685	76640	Mm.78423	NM_029685	ENSMUSG00000047129	1700113H08Rik	-	RIKEN cDNA 1700113H08 gene	protein-coding
common_peak2-31389-32-55--0.528262902837944-0.895298945923416	chr8	86884440	86885838	+	0	NA	Intergenic	ID_B1|SINE|B4	-54124	NM_001252060	12286	Mm.334658	NM_007578	ENSMUSG00000034656	Cacna1a	APCA|BI|Caca1a|Cacnl1a4|Cav2.1|Ccha1a|EA2|FHM|HPCA|MHP|MHP1|SCA6|alpha1A|la|nmf352|rkr|tg	calcium channel, voltage-dependent, P/Q type, alpha 1A subunit	protein-coding
common_peak1-18644-39-37-0.367833733475568-0.665814527695537	chr8	111536137	111537081	+	0	NA	Intergenic	Intergenic	75849	NR_037295	100526511		NR_037295		Mir3108	mmu-mir-3108	microRNA 3108	ncRNA
common_peak1-16813-9-9--0.132314688483142-1.03275496310833	chr6	47830163	47830702	+	0	NA	intron (NM_146175, intron 2 of 7)	intron (NM_146175, intron 2 of 7)	2878	NM_146175	101095	Mm.440186	NM_146175	ENSMUSG00000025821	Zfp282	AI449432|C81429|E430019K09Rik|HUB1	zinc finger protein 282	protein-coding
common_peak2-25732-95-88-0.672181914057616-3.07994676594214	chr19	24223793	24225744	+	0	NA	intron (NM_011597, intron 1 of 22)	intron (NM_011597, intron 1 of 22)	23862	NM_001198985	21873	Mm.104744	NM_011597	ENSMUSG00000024812	Tjp2	ZO-2	tight junction protein 2	protein-coding
unique_peak1-2345-14-6-1.09186123830004-1.16633110333236	chr15	85568909	85569601	+	0	NA	intron (NM_011144, intron 2 of 7)	B1_Mur1|SINE|Alu	3049	NM_011144	19013	Mm.212789	NM_011144		Ppara	4933429D07Rik|AW742785|Nr1c1|PPAR-alpha|PPARalpha|Ppar	peroxisome proliferator activated receptor alpha	protein-coding
common_peak1-12314-17-36--0.991157027423912-1.46094028072561	chr17	47436795	47437453	+	0	NA	intron (NM_172622, intron 2 of 16)	intron (NM_172622, intron 2 of 16)	-68712	NM_001146212	64657	Mm.216250	NM_183086	ENSMUSG00000034729	Mrps10	1110038B19Rik|AW743084|Rpms10	mitochondrial ribosomal protein S10	protein-coding
unique_peak2-33461-17-24--0.425559851569687-0.427564438475253	chr11	68211585	68212477	+	0	NA	Intergenic	Intergenic	-11703	NM_008744	18208	Mm.39095	NM_008744	ENSMUSG00000020902	Ntn1	AI561871|BC019633|Netrin-1	netrin 1	protein-coding
common_peak2-20690-10-6-0.549060422951165-1.21398586181642	chr10	91157895	91158241	+	0	NA	Intergenic	MLT1A0|LTR|MaLR	376862	NR_029812	723955		NR_029812	miRBase:MI0000715	Mir135a-2	Mirn135a-2	microRNA 135a-2	ncRNA
common_peak1-19067-28-19-0.7310310249341-1.12969433525548	chr9	69456771	69458078	+	0	NA	Intergenic	MTE2b|LTR|MaLR	151323	NM_022378	64290	Mm.440890	NM_022378	ENSMUSG00000059246	Foxb1	C43|Fkh5|Foxb1a|Foxb1b|Hfh-e5.1|Mf3|Twh	forkhead box B1	protein-coding
unique_peak1-4537-8-4-0.683294323060208-1.21878474469819	chr3	37687124	37687620	+	0	NA	Intergenic	Intergenic	-64090	NM_198657	381438	Mm.490549	NM_198657	ENSMUSG00000058174	Gm5148	EG381438	predicted gene 5148	protein-coding
common_peak2-31485-10-11--0.228547155712387-0.31137425193576	chr8	106577525	106577892	+	0	NA	Intergenic	MTB_Mm|LTR|MaLR	-47817	NM_009868	12562	Mm.21767	NM_009868	ENSMUSG00000031871	Cdh5	7B4|AA408225|Cd144|VE-Cad|VECD|VEcad|Vec	cadherin 5	protein-coding
common_peak1-18171-54-90--0.334708878568962-0.736222529913287	chr8	13785081	13786435	+	0	NA	exon (NM_025924, exon 1 of 9)	exon (NM_025924, exon 1 of 9)	143	NM_025924	67031	Mm.44858	NM_025924	ENSMUSG00000038398	Upf3a	2600001C03Rik|4930546M19Rik|RENT3A|UPF3	UPF3 regulator of nonsense transcripts homolog A (yeast)	protein-coding
common_peak1-11343-77-106-0.043059593154851-0.317115895953177	chr15	88732970	88734618	+	0	NA	Intergenic	Intergenic	41170	NM_145478	223775	Mm.400129	NM_145478	ENSMUSG00000035828	Pim3	BC026639|Kid1	proviral integration site 3	protein-coding
unique_peak1-3741-10-5-0.771452844287613-1.33892459842472	chr19	47317151	47317725	+	0	NA	intron (NM_021360, intron 3 of 5)	URR1B|DNA|MER1_type	14105	NM_001163480	18011	Mm.313651	NM_021360	ENSMUSG00000006435	Neurl1a	2410129E16Rik|AI450910|AI481072|Neu1|Neur1|Neurl|Neurl1|Nlz|Rnf67	neuralized homolog 1A (Drosophila)	protein-coding
common_peak2-21161-9-12--0.510826311736872-0.394412252720706	chr11	58330854	58331466	+	0	NA	Intergenic	L1_Mus2|LINE|L1	-15104	NM_001011861	100502887	Mm.378539	NM_001011861	ENSMUSG00000058807	Olfr331	MOR275-4	olfactory receptor 331	protein-coding
common_peak1-11155-59-13-2.51800907881497-11.9563679162426	chr15	75215640	75217267	+	0	NA	Intergenic	Intergenic	45806	NR_108041	105892	Mm.38909	NM_001039720	ENSMUSG00000053168	9030619P08Rik	-	lymphocyte antigen 6 complex pseudogene	pseudo
common_peak2-24303-36-83--0.912996336611006-2.78803811283107	chr17	27622780	27624024	+	0	NA	intron (NM_001291045, intron 1 of 9)	intron (NM_001291045, intron 1 of 9)	17076	NM_001013385	268934	Mm.358940	NM_001013385	ENSMUSG00000063239	Grm4	Gprc1d|mGluR4	glutamate receptor, metabotropic 4	protein-coding
unique_peak2-33296-8-21--1.45420920068973-1.61268301619756	chr11	3331608	3332388	+	0	NA	intron (NR_110959, intron 1 of 5)	MIR|SINE|MIR	-20442	NR_028317	71523	Mm.72795	NM_027820	ENSMUSG00000034587	8430429K09Rik	-	RIKEN cDNA 8430429K09 gene	ncRNA
common_peak1-15683-10-23--1.22854715571239-1.44380006500971	chr4	138216630	138217068	+	0	NA	Intergenic	Intergenic	-36942	NM_029401	75718	Mm.251530	NM_029401		Vwa5b1	4931403E03Rik	von Willebrand factor A domain containing 5B1	protein-coding
common_peak2-25736-7-6--0.00826409175941478-0.97990265578305	chr19	24325915	24326375	+	0	NA	Intergenic	B1F|SINE|Alu	-26629	NM_011597	21873	Mm.104744	NM_011597	ENSMUSG00000024812	Tjp2	ZO-2	tight junction protein 2	protein-coding
common_peak1-19341-66-94--0.0513719439051066-0.305699918794761	chrX	7713922	7715066	+	0	NA	Intergenic	Intergenic	-4510	NM_026137	73447	Mm.284162	NM_026137	ENSMUSG00000031166	Wdr13	1700060B08Rik|5730411P10Rik|DXHXS7467e|W51679|mMg21	WD repeat domain 13	protein-coding
common_peak1-7477-6-10--0.894033508256995-1.21398586181642	chr1	181256176	181256632	+	0	NA	intron (NM_027188, intron 5 of 11)	intron (NM_027188, intron 5 of 11)	191730	NM_027188	69726	Mm.222338	NM_027188		Smyd3	2410008A19Rik|Zmynd1	SET and MYND domain containing 3	protein-coding
unique_peak2-37616-3-13--2.22133801201688-2.36932189928148	chr5	64666655	64667211	+	0	NA	intron (NM_019636, intron 8 of 19)	intron (NM_019636, intron 8 of 19)	45337	NM_001289514	57915	Mm.286353	NM_019636	ENSMUSG00000029174	Tbc1d1	1110062G02Rik|AI385682|AW555803|Tbc1|mKIAA1108	TBC1 domain family, member 1	protein-coding
unique_peak2-33129-13-18--0.469455482805817-0.409888142029227	chr10	81642972	81643772	+	0	NA	Intergenic	Intergenic	52614	NM_001163064	216177	Mm.482395	NM_001163064		AU041133	-	expressed sequence AU041133	protein-coding
common_peak2-26180-24-18-0.545282389324131-0.776879508296351	chr2	24440412	24441170	+	0	NA	Intergenic	Intergenic	-109672	NM_011040	18510	Mm.2533	NM_011040	ENSMUSG00000026976	Pax8	Pax-8	paired box 8	protein-coding
unique_peak2-37613-14-7-0.899216160357645-0.947446088118041	chr5	64505225	64505783	+	0	NA	intron (NM_025700, intron 12 of 13)	ORR1E|LTR|MaLR	21315	NM_025700	66681	Mm.2325	NM_025700	ENSMUSG00000029171	Pgm1	3230402E02Rik|Pgm-1|Pgm2	phosphoglucomutase 1	protein-coding
common_peak1-15703-15-19--0.309763344331706-0.356936432242222	chr4	139796802	139797558	+	0	NA	intron (NM_198610, intron 1 of 9)	intron (NM_198610, intron 1 of 9)	5546	NM_198610	230868	Mm.298731	NM_198610	ENSMUSG00000040972	Igsf21	BC055811|Gm141	immunoglobulin superfamily, member 21	protein-coding
common_peak1-12350-16-15-0.118263642268062-0.328191099940264	chr17	56291148	56291800	+	0	NA	Intergenic	Intergenic	-10440	NM_025566	66443	Mm.2312	NM_025566	ENSMUSG00000044469	Tnfaip8l1	2600017J23Rik	tumor necrosis factor, alpha-induced protein 8-like 1	protein-coding
common_peak1-17094-26-21-0.468467473521165-0.647723624534446	chr6	113030142	113031317	+	0	NA	intron (NM_028385, intron 1 of 21)	intron (NM_028385, intron 1 of 21)	3096	NM_028385	72895	Mm.367159	NM_028385	ENSMUSG00000034269	Setd5	2900045N06Rik|C330007C20|C85544|mKIAA1757	SET domain containing 5	protein-coding
unique_peak1-3269-8-3-1.00522241794757-1.39487600375387	chr18	69592341	69592867	+	0	NA	intron (NM_001083967, intron 3 of 19)	intron (NM_001083967, intron 3 of 19)	87229	NM_001083967	21413	Mm.4269	NM_013685	ENSMUSG00000053477	Tcf4	5730422P05Rik|ASP-I2|E2-2|E2.2|ITF-2|ITF-2b|ITF2|ME2|MITF-2A|MITF-2B|SEF-2|SEF2|SEF2-1|TFE|Tcf-4|bHLHb19	transcription factor 4	protein-coding
common_peak2-30222-21-33--0.517973575984104-0.610902792227722	chr7	142392735	142394007	+	0	NA	Intergenic	Lx4A|LINE|L1	-5686	NR_046050	74314	Mm.415339	NR_046050		1700120G07Rik	-	RIKEN cDNA 1700120G07 gene	ncRNA
unique_peak2-38190-3-12--2.11442280810037-2.15846853396659	chr6	98902405	98902964	+	0	NA	intron (NM_053202, intron 12 of 18)	intron (NM_053202, intron 12 of 18)	75608	NM_001197322	108655	Mm.234965	NM_053202	ENSMUSG00000030067	Foxp1	3110052D19Rik|4932443N09Rik|AI461938|AW494214	forkhead box P1	protein-coding
common_peak2-25306-47-24-1.29098523499182-3.91816067812284	chr18	73947950	73949053	+	0	NA	intron (NM_145494, intron 10 of 15)	intron (NM_145494, intron 10 of 15)	26545	NM_145494	107029	Mm.36817	NM_145494	ENSMUSG00000024556	Me2	AW120568|D030040L20Rik|NAD-ME	malic enzyme 2, NAD(+)-dependent, mitochondrial	protein-coding
common_peak1-14261-24-36--0.416243462861233-0.518746288394493	chr2	155818573	155819401	+	0	NA	intron (NM_177217, intron 29 of 33)	intron (NM_177217, intron 29 of 33)	11176	NM_001145351	320095	Mm.442175	NM_001145351	ENSMUSG00000074646	6430550D23Rik	-	RIKEN cDNA 6430550D23 gene	protein-coding
common_peak1-16131-26-35--0.24202590928385-0.384630725886657	chr5	72167387	72168315	+	0	NA	intron (NM_008069, intron 3 of 8)	intron (NM_008069, intron 3 of 8)	76596	NM_008069	14400	Mm.38567	NM_008069		Gabrb1	AW061132|B230208N19Rik|Gabrb-1	gamma-aminobutyric acid (GABA) A receptor, subunit beta 1	protein-coding
unique_peak2-37750-6-7--0.434601889619698-0.97990265578305	chr5	111205314	111205764	+	0	NA	intron (NM_001025562, intron 3 of 5)	intron (NM_001025562, intron 3 of 5)	4076	NM_019700	56361	Mm.23528	NM_019700	ENSMUSG00000029507	Pus1	A730013B20Rik|MPUS1|mPus1p	pseudouridine synthase 1	protein-coding
unique_peak2-33748-4-7--1.02346051385325-1.09384600808989	chr11	117097655	117098064	+	0	NA	intron (NM_001113486, intron 2 of 11)	RSINE1|SINE|B4	-29701	NM_001113487	53860	Mm.38450	NM_017380	ENSMUSG00000059248	Sept9	MSF1|Msf|PNUTL4|Sint1	septin 9	protein-coding
unique_peak2-36535-2-5--1.50241675698448-1.08602067057793	chr2	164469324	164469666	+	0	NA	Intergenic	Intergenic	-5193	NM_001012723	277345	Mm.247244	NM_001012723	ENSMUSG00000070530	Wfdc16	BC043944|WAP16	WAP four-disulfide core domain 16	protein-coding
common_peak1-8550-47-54-0.153481711241888-0.393610822453554	chr10	93342590	93343944	+	0	NA	intron (NM_019648, intron 3 of 11)	intron (NM_019648, intron 3 of 11)	10680	NM_019648	56307	Mm.289329	NM_019648	ENSMUSG00000036112	Metap2	4930584B20Rik|A930035J23Rik|AI047573|AL024412|AU014659|Amp2|Mnpep|p67|p67eIF2	methionine aminopeptidase 2	protein-coding
unique_peak2-33734-2-11--2.50241675698448-2.32232533660526	chr11	116086498	116087024	+	0	NA	intron (NM_025276, intron 19 of 21)	intron (NM_025276, intron 19 of 21)	9445	NR_004853	69681	Mm.33677	NR_004853	ENSMUSG00000092300	Cdk3-ps	2310050O10Rik|Cdk3	cyclin-dependent kinase 3, pseudogene	pseudo
common_peak2-26608-75-73-0.529613626114335-1.70401129769616	chr2	114654414	114655230	+	0	NA	Intergenic	Intergenic	-174158	NM_025675	66632	Mm.117809	NM_025675	ENSMUSG00000057147	Dph6	5730421E18Rik|Atpbd4	diphthamine biosynthesis 6	protein-coding
common_peak2-28953-3-13--2.22133801201688-2.36932189928148	chr5	100571736	100572095	+	0	NA	intron (NM_182841, intron 1 of 7)	intron (NM_182841, intron 1 of 7)	16912	NM_182841	231503	Mm.99790	NM_182841	ENSMUSG00000050640	Tmem150c	-	transmembrane protein 150C	protein-coding
common_peak2-28933-30-53--0.585212092671595-1.01050013482523	chr5	96800219	96801224	+	0	NA	Intergenic	Intergenic	-2253	NM_175473	231470	Mm.291120	NM_175473	ENSMUSG00000034687	Fras1	E130113P14Rik|bl|mKIAA1500	Fraser syndrome 1 homolog (human)	protein-coding
unique_peak1-6749-12-1-2.64877598508764-3.36932189928148	chr8	47973893	47974406	+	0	NA	Intergenic	Intergenic	-98130	NM_177304	320981	Mm.211429	NM_177304	ENSMUSG00000038173	Enpp6	4833421B01Rik|B830047L21Rik|D8Ertd514e|E-NPP 6|Npp6	ectonucleotide pyrophosphatase/phosphodiesterase 6	protein-coding
common_peak2-30509-18-13-0.505564229170747-0.625923329873571	chr7	65468526	65469153	+	0	NA	Intergenic	Intergenic	-444733	NM_009728	11982	Mm.135129	NM_009728	ENSMUSG00000025324	Atp10a	Atp10c|pfatp	ATPase, class V, type 10A	protein-coding
common_peak2-28434-17-16-0.130833496954699-0.356936432242225	chr4	149099195	149099902	+	0	NA	3' UTR (NM_001284273, exon 6 of 6)	3' UTR (NM_001284273, exon 6 of 6)	12331	NM_001284273	230917	Mm.266704	NM_177672	ENSMUSG00000044700	Tmem201	AV028368|D4Ertd429e|Net5|Samp1	transmembrane protein 201	protein-coding
common_peak2-31806-18-30--0.641277159158523-0.738267116931589	chr9	37347782	37348996	+	0	NA	intron (NM_020518, intron 3 of 6)	intron (NM_020518, intron 3 of 6)	1549	NM_020518	57276	Mm.27478	NM_020518	ENSMUSG00000001943	Vsig2	1190004B15Rik|2210413P10Rik|AU040484|CTX|Ctm	V-set and immunoglobulin domain containing 2	protein-coding
common_peak2-31255-19-17-0.232762325219374-0.392630012299441	chr8	70682424	70683106	+	0	NA	Intergenic	Intergenic	-117662	NM_028182	72281	Mm.40974	NM_028182	ENSMUSG00000053886	Sh2d4a	2210402M20Rik|SH2A	SH2 domain containing 4A	protein-coding
unique_peak2-37888-5-9--1.02630843089322-1.21398586181642	chr5	139908266	139908830	+	0	NA	intron (NM_028469, intron 2 of 4)	intron (NM_028469, intron 2 of 4)	9415	NM_029771	76854	Mm.389706	NM_029771	ENSMUSG00000053647	Gper1	6330420K13Rik|CMKRL2|Ceprl|FEG-1|GPCR-Br|Gper|Gpr30	G protein-coupled estrogen receptor 1	protein-coding
unique_peak2-37878-4-9--1.34538860874061-1.36011389749466	chr5	139095987	139096467	+	0	NA	Intergenic	Intergenic	32140	NM_183025	243308	Mm.36612	NM_183025	ENSMUSG00000056014	A430033K04Rik	C86988	RIKEN cDNA A430033K04 gene	protein-coding
unique_peak2-35795-4-5--0.608423014574403-0.909929411522249	chr18	57804691	57805008	+	0	NA	intron (NM_029290, intron 5 of 6)	L1_Mus1|LINE|L1	-6610	NR_045360	70157	Mm.490532	NR_045360		2210409D07Rik	-	RIKEN cDNA 2210409D07 gene	ncRNA
common_peak1-8402-8-3-1.00522241794757-1.39487600375387	chr10	68280266	68280684	+	0	NA	Intergenic	Intergenic	93981	NM_177794	327766	Mm.2479	NM_177794	ENSMUSG00000060044	Tmem26	3230401A06|AI195372	transmembrane protein 26	protein-coding
common_peak1-12148-12-7-0.648775985087639-0.697979855752659	chr17	28026082	28026719	+	0	NA	intron (NM_001080769, intron 14 of 20)	intron (NM_001080769, intron 14 of 20)	18269	NM_026836	68776	Mm.267998	NM_026836	ENSMUSG00000024218	Taf11	1110038O14Rik|28kDa|AI115401|AL024207|AW552398|PRO214|TAF2I|TAFII28	TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor	protein-coding
common_peak2-20547-19-19-0.0807592317743238-0.322753776620787	chr10	68278725	68279247	+	0	NA	Intergenic	Intergenic	92492	NM_177794	327766	Mm.2479	NM_177794	ENSMUSG00000060044	Tmem26	3230401A06|AI195372	transmembrane protein 26	protein-coding
common_peak2-21733-11-7-0.508693584251613-1.21681515183528	chr11	114981392	114981830	+	0	NA	exon (NM_001169153, exon 4 of 7)	exon (NM_001169153, exon 4 of 7)	13695	NM_001169153	246746	Mm.277387	NM_145634	ENSMUSG00000047798	Cd300lf	CLIM1|CLM-1|CLM1|Digr2|F730004D16Rik|IREM1|IgSF13|LMIR3|Pigr3	CD300 antigen like family member F	protein-coding
unique_peak2-39237-3-6--1.22133801201688-1.08602067057793	chr8	111724292	111724713	+	0	NA	Intergenic	Intergenic	140306	NR_002928	384864	Mm.390083	NR_002928		Gm1943	-	WD repeat domain 70 pseudogene	pseudo
common_peak2-27311-9-8-0.0196884049619079-1.03275496310833	chr3	65136637	65137118	+	0	NA	intron (NR_040390, intron 2 of 3)	intron (NR_040390, intron 2 of 3)	16474	NR_040390	319798	Mm.445698	NR_040390		A730090N16Rik	-	RIKEN cDNA A730090N16 gene	ncRNA
common_peak1-13393-18-4-1.99099105634099-2.82951996911245	chr19	47066945	47067778	+	0	NA	intron (NM_001164363, intron 1 of 17)	RLTR11A2|LTR|ERVK	-21827	NM_146100	226180	Mm.276251	NM_146100		Ina	AV028420|NF-66|NF66	internexin neuronal intermediate filament protein, alpha	protein-coding
common_peak2-29502-8-12--0.695217300193522-0.475924844171029	chr6	33946947	33947576	+	0	NA	Intergenic	RMER5|LTR|ERV1	-32187	NM_028886	74354	Mm.127952	NM_028886	ENSMUSG00000056215	Lrguk	4921528H16Rik	leucine-rich repeats and guanylate kinase domain containing	protein-coding
common_peak2-32047-12-22--0.874785970969374-0.809260849721102	chr9	80165065	80165579	+	0	NA	intron (NM_022016, intron 15 of 16)	intron (NM_022016, intron 15 of 16)	152481	NM_001039546	17920	Mm.4040	NM_008662	ENSMUSG00000033577	Myo6	BC029719|Tlc|sv	myosin VI	protein-coding
common_peak2-24183-9-5-0.604650905683064-1.21398586181642	chr16	52444099	52444442	+	0	NA	intron (NM_009655, intron 1 of 15)	intron (NM_009655, intron 1 of 15)	8840	NM_009655	11658	Mm.288282	NM_009655	ENSMUSG00000022636	Alcam	AI853494|BEN|CD166|DM-GRASP|MuSC|SC1	activated leukocyte cell adhesion molecule	protein-coding
unique_peak1-2075-10-3-1.35641534500877-1.75805390616669	chr15	36832826	36833393	+	0	NA	Intergenic	Intergenic	104048	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
common_peak1-15993-47-59-0.027950829158029-0.30826857217007	chr5	33018829	33020129	+	0	NA	Intergenic	Intergenic	105935	NM_009535	22612	Mm.4558	NM_009535	ENSMUSG00000014932	Yes1	Yes|p61-Yes	Yamaguchi sarcoma viral (v-yes) oncogene homolog 1	protein-coding
unique_peak2-33958-4-7--1.02346051385325-1.09384600808989	chr12	80220222	80220696	+	0	NA	Intergenic	B3|SINE|B2	-11316	NM_009705	11847	Mm.3506	NM_009705	ENSMUSG00000021125	Arg2	AII|AU022422	arginase type II	protein-coding
unique_peak1-5000-9-2-1.60465090568306-1.87199725847353	chr4	117883008	117883409	+	0	NA	promoter-TSS (NR_106085)	promoter-TSS (NR_106085)	-39	NR_106085	102466820		NR_106085		Mir7226	mmu-mir-7226	microRNA mir-7226	ncRNA
unique_peak1-1152-10-1-2.35641534500877-2.57096726280955	chr11	98580993	98581548	+	0	NA	intron (NM_011869, intron 3 of 25)	intron (NM_011869, intron 3 of 25)	9479	NM_011869	23989	Mm.246493	NM_011869	ENSMUSG00000017210	Med24	911GSE|AU040102|AW547152|D11Ertd307e|DRIP100|Gse2|Pparb2|Pparbp2|R75526|Thrap4|Trap100	mediator complex subunit 24	protein-coding
unique_peak1-1904-7-6--0.00826409175941478-0.97990265578305	chr14	69268624	69269057	+	0	NA	intron (NR_102399, intron 1 of 21)	intron (NR_102399, intron 1 of 21)	5059	NM_010082	13522	Mm.117450	NM_010082	ENSMUSG00000014725	Adam28	C130072N01Rik|D430033C21Rik|Dtgn1|MDC-L|MDC-Lm|MDC-Ls|MDCL|TECADAM|eMDCII	a disintegrin and metallopeptidase domain 28	protein-coding
common_peak1-12474-16-32--0.926130477090392-1.31432283146954	chr17	84115958	84116698	+	0	NA	intron (NM_001171053, intron 3 of 13)	L1M2|LINE|L1	10825	NM_001171052	116871	Mm.277668	NM_054082	ENSMUSG00000055817	Mta3	1110002J22Rik|mKIAA1266	metastasis associated 3	protein-coding
common_peak2-28169-24-20-0.400892479988956-0.591915184368645	chr4	108619450	108620296	+	0	NA	intron (NR_040664, intron 4 of 5)	(CA)n|Simple_repeat|Simple_repeat	24809	NR_040664	77173	Mm.402545	NR_040664	ENSMUSG00000086483	8030443G20Rik	-	RIKEN cDNA 8030443G20 gene	ncRNA
unique_peak1-1889-8-4-0.683294323060208-1.21878474469819	chr14	64119062	64119570	+	0	NA	intron (NM_021480, intron 1 of 8)	intron (NM_021480, intron 1 of 8)	8613	NM_021480	58865	Mm.354229	NM_021480	ENSMUSG00000021953	Tdh	-	L-threonine dehydrogenase	protein-coding
common_peak2-31001-24-27--0.0141450192898871-0.304978344874324	chr8	10588849	10590056	+	0	NA	intron (NM_001081397, intron 33 of 35)	intron (NM_001081397, intron 33 of 35)	293002	NR_040705	320014	Mm.403203	NR_040705		B930025P03Rik	-	RIKEN cDNA B930025P03 gene	ncRNA
common_peak2-23722-45-66--0.2057311651129-0.413183870294151	chr15	93335980	93337528	+	0	NA	intron (NM_001033217, intron 5 of 7)	B2_Mm1a|SINE|B2	89568	NM_001033217	106042	Mm.150314	NM_001033217	ENSMUSG00000036158	Prickle1	1110058P22Rik|AW215793|Prickle|b2b019Clo|mpk1	prickle homolog 1 (Drosophila)	protein-coding
common_peak2-22458-18-21--0.146512467408946-0.306326795069975	chr13	44730736	44731329	+	0	NA	Intergenic	Intergenic	-95111	NM_021878	16468	Mm.25059	NM_021878	ENSMUSG00000038518	Jarid2	Jmj|jumonji	jumonji, AT rich interactive domain 2	protein-coding
common_peak1-16839-8-6-0.197867495889966-1.03789460276074	chr6	51545356	51545705	+	0	NA	Intergenic	Intergenic	51008	NM_001127348	71982	Mm.294166	NM_028035	ENSMUSG00000038301	Snx10	2410004M09Rik	sorting nexin 10	protein-coding
common_peak1-14222-19-22--0.120874629395327-0.306080386793804	chr2	152293726	152294398	+	0	NA	Intergenic	B4|SINE|B4	-3706	NM_001037933	629114	Mm.389372	NM_001037933	ENSMUSG00000074681	Defb23	EG629114	defensin beta 23	protein-coding
unique_peak1-959-10-2-1.77145284428761-2.09384600808989	chr11	60206965	60207462	+	0	NA	exon (NM_029044, exon 13 of 14)	exon (NM_029044, exon 13 of 14)	23388	NM_145427	246782	Mm.41651	NM_145427	ENSMUSG00000042709	Atpaf2	ATP12|ATP12p	ATP synthase mitochondrial F1 complex assembly factor 2	protein-coding
common_peak2-23427-17-10-0.75886471956774-0.917676348953458	chr15	61610864	61611453	+	0	NA	Intergenic	Lx7|LINE|L1	-5152	NR_040350	432956	Mm.404918	NR_040350		D030024E09Rik	-	RIKEN cDNA D030024E09 gene	ncRNA
common_peak2-23942-23-16-0.634304663258741-0.82304638657543	chr16	13667207	13668217	+	0	NA	intron (NM_028761, intron 1 of 23)	intron (NM_028761, intron 1 of 23)	551	NM_028761	74108	Mm.182350	NM_028761	ENSMUSG00000022685	Parn	1200003I18Rik|DAN	poly(A)-specific ribonuclease (deadenylation nuclease)	protein-coding
common_peak2-19723-27-47--0.59341654982592-0.923258070389341	chr1	71653198	71654325	+	0	NA	intron (NM_001276413, intron 28 of 43)	Lx9|LINE|L1	46047	NM_010233	14268	Mm.193099	NM_010233	ENSMUSG00000026193	Fn1	E330027I09|Fn|Fn-1	fibronectin 1	protein-coding
common_peak2-31883-15-11-0.4272022498345-0.503257505534083	chr9	56075522	56076055	+	0	NA	intron (NM_172924, intron 5 of 6)	intron (NM_172924, intron 5 of 6)	-66911	NM_019793	56434	Mm.28484	NM_019793	ENSMUSG00000032324	Tspan3	1700055K04Rik|TM4-A|Tm4sf8	tetraspanin 3	protein-coding
unique_peak1-1919-40-10-2.1995440641138-6.84481877650479	chr14	75794024	75795519	+	0	NA	Intergenic	Intergenic	-61018	NM_001128093	380918	Mm.484360	NM_001128093	ENSMUSG00000091722	Siah3	Gm912	seven in absentia homolog 3 (Drosophila)	protein-coding
common_peak2-31381-97-127-0.184001071492282-0.559879804442625	chr8	85554223	85556028	+	0	NA	intron (NM_177378, intron 4 of 6)	intron (NM_177378, intron 4 of 6)	-134126	NM_001111304	71310	Mm.24031	NM_027758	ENSMUSG00000031709	Tbc1d9	4933431N12Rik|AI847101|AW490653|C76116	TBC1 domain family, member 9	protein-coding
common_peak2-30875-10-8-0.186490343566457-1.078512453669	chr7	141096756	141097153	+	0	NA	intron (NM_007400, intron 21 of 22)	L1MEf|LINE|L1	-122486	NM_001286031	101437	Mm.199223	NM_133941	ENSMUSG00000030986	Dhx32	3110079L04Rik|4732469F02Rik|AA408140|Ddx32	DEAH (Asp-Glu-Ala-His) box polypeptide 32	protein-coding
unique_peak1-4876-7-0-2.79909083029819-2.40823996531185	chr4	19271513	19272049	+	0	NA	intron (NM_013927, intron 3 of 17)	intron (NM_013927, intron 3 of 17)	63784	NM_013927	30952	Mm.445778	NM_013927	ENSMUSG00000056494	Cngb3	CCNC2|CNG6|Cngbeta2	cyclic nucleotide gated channel beta 3	protein-coding
common_peak1-8559-29-36--0.0971632850138393-0.304088508634286	chr10	94147611	94148384	+	0	NA	intron (NR_015524, intron 1 of 2)	L1M5|LINE|L1	3361	NR_015524	67723	Mm.116284	NR_015524	ENSMUSG00000097164	Cep83os	4932415G12Rik|Ccdc41os1	centrosomal protein 83, opposite strand	ncRNA
common_peak1-12229-25-38--0.423552313517143-0.564346534703877	chr17	35000681	35001520	+	0	NA	exon (NM_013484, exon 13 of 18)	exon (NM_013484, exon 13 of 18)	-1641	NM_008198	14962	Mm.653	NM_008198	ENSMUSG00000090231	Cfb	AI195813|AI255840|B|Bf|C2|Fb|H2-Bf	complement factor B	protein-coding
unique_peak2-36354-2-8--2.08737925770563-1.65811743852845	chr2	100520532	100521030	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-944124	NM_009020	19374	Mm.4988	NM_009020	ENSMUSG00000032864	Rag2	Rag-2	recombination activating gene 2	protein-coding
unique_peak2-37296-5-16--1.79184317725619-1.61682445937017	chr4	119421842	119422407	+	0	NA	Intergenic	Intergenic	-65159	NM_010657	16656	Mm.302758	NM_010657	ENSMUSG00000028634	Hivep3	2900056N03Rik|A130075N07|AI848000|E030045D18Rik|KBP-1|KBP1|Krc|Rc|Schnurri-3|Shn3|Zas3	human immunodeficiency virus type I enhancer binding protein 3	protein-coding
common_peak2-28192-21-34--0.559793751678731-0.677299098039755	chr4	116463420	116464228	+	0	NA	intron (NM_146151, intron 4 of 10)	B3|SINE|B2	16340	NM_026654	68276	Mm.30534	NM_026654	ENSMUSG00000028688	Toe1	4930584N22Rik|4933424D16Rik|AI413517	target of EGR1, member 1 (nuclear)	protein-coding
common_peak2-29331-18-24--0.330937038546373-0.380101753845076	chr5	147314916	147315932	+	0	NA	intron (NM_026136, intron 3 of 4)	intron (NM_026136, intron 3 of 4)	1449	NM_026136	67410	Mm.463005	NM_026136	ENSMUSG00000079093	4930449I24Rik	-	RIKEN cDNA 4930449I24 gene	protein-coding
unique_peak1-1571-7-4-0.477162735410827-1.09384600808989	chr13	31328342	31328831	+	0	NA	intron (NR_045957, intron 1 of 2)	IAPEz-int|LTR|ERVK	4369	NR_045957	73924	Mm.417825	NR_045957	ENSMUSG00000087460	4930401O12Rik	-	RIKEN cDNA 4930401O12 gene	ncRNA
common_peak1-16804-39-88--0.859972184047244-2.74550477181371	chr6	47739855	47740995	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	13226	NR_030485	735289		NR_030485		Mir704	Mirn704|mmu-mir-704	microRNA 704	ncRNA
unique_peak1-6059-13-7-0.778472030637769-0.817533494790411	chr6	115975153	115975685	+	0	NA	intron (NM_177412, intron 4 of 5)	intron (NM_177412, intron 4 of 5)	-30396	NM_026376	67784	Mm.3085	NM_026376	ENSMUSG00000030123	Plxnd1	6230425C21Rik|b2b1863Clo|b2b553Clo	plexin D1	protein-coding
common_peak1-12834-9-6-0.382258484346616-1.11707584880836	chr18	70051411	70051904	+	0	NA	Intergenic	Intergenic	-33556	NM_201362	381175	Mm.266831	NM_201362	ENSMUSG00000038903	Ccdc68	BC046343	coiled-coil domain containing 68	protein-coding
unique_peak1-5489-30-3-3.16967540949187-7.44793394430711	chr5	131836043	131836913	+	0	NA	Intergenic	B3A|SINE|B2	-53086	NM_145218	212996	Mm.299204	NM_145218		Wbscr17	AA388321|E330012B09Rik	Williams-Beuren syndrome chromosome region 17 homolog (human)	protein-coding
unique_peak1-1513-7-5-0.214128329577033-1.01466476204226	chr13	5837058	5837552	+	0	NA	Intergenic	ID_B1|SINE|B4	20033	NR_045891	71867	Mm.179181	NR_045891		1700016G22Rik	-	RIKEN cDNA 1700016G22 gene	ncRNA
common_peak2-28670-10-5-0.771452844287613-1.33892459842472	chr5	31984207	31984606	+	0	NA	intron (NM_153196, intron 1 of 7)	B3A|SINE|B2	-14693	NR_105859	102466677		NR_105859		Mir3473e	mmu-mir-3473e	microRNA mir-3473e	ncRNA
common_peak2-23264-29-64--0.910077732413344-2.17301518846909	chr15	25622572	25623806	+	0	NA	intron (NM_019472, intron 2 of 40)	intron (NM_019472, intron 2 of 40)	70884	NM_019472	17909	Mm.60590	NM_019472	ENSMUSG00000022272	Myo10	AW048724|D15Ertd600e|mKIAA0799	myosin X	protein-coding
common_peak2-24361-7-9--0.522837264589173-1.05908390183068	chr17	6779903	6780294	+	0	NA	Intergenic	MTE2a|LTR|MaLR	-26290	NM_001166627	100040531	Mm.457987	NM_001166627	ENSMUSG00000095677	Dynlt1f	100040631|Dynlt1e	dynein light chain Tctex-type 1F	protein-coding
common_peak1-10370-21-35--0.600435736176077-0.748982406290541	chr13	92530124	92530859	+	0	NA	intron (NM_009027, intron 9 of 23)	intron (NM_009027, intron 9 of 23)	370958	NM_009027	19418	Mm.248630	NM_009027		Rasgrf2	6330417G04Rik|AW048350|Grf2|Ras-GRF2	RAS protein-specific guanine nucleotide-releasing factor 2	protein-coding
common_peak2-25109-12-14--0.25811461052088-0.309074325783021	chr18	36782451	36783152	+	0	NA	intron (NM_175375, intron 14 of 33)	intron (NM_175375, intron 14 of 33)	-40913	NM_201256	108112	Mm.24790	NM_201256		Eif4ebp3	4e-bp3	eukaryotic translation initiation factor 4E binding protein 3	protein-coding
common_peak1-7726-17-13-0.410941416147434-0.546772548767014	chr1	88454649	88455374	+	0	NA	intron (NM_008801, intron 1 of 4)	L1MC4a|LINE|L1	24065	NM_008801	18582	Mm.12925	NM_008801	ENSMUSG00000026239	Pde6d	AI841218|PrBP/delta	phosphodiesterase 6D, cGMP-specific, rod, delta	protein-coding
common_peak2-30138-35-32-0.386976139104051-0.652627812244279	chr6	142386990	142387938	+	0	NA	intron (NM_145572, intron 12 of 16)	L1Md_F2|LINE|L1	25513	NM_001242345	319552	Mm.39649	NM_001242345	ENSMUSG00000071112	B230216G23Rik	Npq|Spx	RIKEN cDNA B230216G23 gene	protein-coding
unique_peak1-6191-16-2-2.53330114154691-3.78760380288747	chr6	147761556	147762490	+	0	NA	Intergenic	Intergenic	123260	NR_033636	100039727	Mm.396220	NR_033636	ENSMUSG00000085077	1700049E15Rik	Gm15761|OTTMUSG00000026044	RIKEN cDNA 1700049E15 gene	ncRNA
unique_peak1-1-17-0-4.21829633820504-6.02059991327962	chr1	40632195	40633087	+	0	NA	Intergenic	Intergenic	-4431	NM_177084	110895	Mm.108602	NM_177084	ENSMUSG00000026065	Slc9a4	AW990558|D730009J23Rik|NHE4	solute carrier family 9 (sodium/hydrogen exchanger), member 4	protein-coding
common_peak1-13588-8-6-0.197867495889966-1.03789460276074	chr2	14744158	14744775	+	0	NA	intron (NM_023116, intron 2 of 13)	MER58B|DNA|MER1_type	-1253	NM_001252533	12296	Mm.313930	NM_023116	ENSMUSG00000057914	Cacnb2	AW060387|CAB2|Cavbeta2|Cchb2	calcium channel, voltage-dependent, beta 2 subunit	protein-coding
common_peak1-11385-17-10-0.75886471956774-0.917676348953458	chr15	97772580	97773362	+	0	NA	Intergenic	RMER19B|LTR|ERVK	-21689	NM_201359	380967	Mm.196630	NM_201359	ENSMUSG00000052369	Tmem106c	AI046681|BC046621|D15Ertd405e	transmembrane protein 106C	protein-coding
unique_peak1-6254-9-2-1.60465090568306-1.87199725847353	chr7	19676210	19676870	+	0	NA	intron (NM_001190490, intron 11 of 15)	PB1D10|SINE|Alu	-3353	NM_011383	20475	Mm.3410	NM_011383	ENSMUSG00000040841	Six5	Dmahp|MDMAHP|TrexBF	sine oculis-related homeobox 5	protein-coding
common_peak2-21841-11-12--0.191746133889479-0.310474156842889	chr11	120796377	120797045	+	0	NA	Intergenic	Intergenic	-2525	NM_027745	71276	Mm.275751	NM_027745	ENSMUSG00000048445	Ccdc57	4933434G05Rik	coiled-coil domain containing 57	protein-coding
unique_peak1-5812-41-6-2.89379378279106-9.38302748883595	chr6	69402956	69404664	+	0	NA	Intergenic	L1Md_T|LINE|L1	-126642	NR_004434	19783		NR_004434		Rprl1	Rmrp2|Rpr|Rprh2	ribonuclease P RNA-like 1	ncRNA
common_peak1-13239-11-11--0.0762689164695427-0.301029995663976	chr19	29366886	29367603	+	0	NA	intron (NM_001048177, intron 12 of 23)	Lx8|LINE|L1	32564	NM_013754	27356	Mm.306511	NM_013754	ENSMUSG00000050957	Insl6	RIF1	insulin-like 6	protein-coding
common_peak1-16320-14-11-0.314253659636488-0.435191258261915	chr5	115543587	115544247	+	0	NA	intron (NM_029012, intron 8 of 10)	intron (NM_029012, intron 8 of 10)	14054	NM_001271591	100502825	Mm.361657	NM_001271590		Gm13826	OTTMUSG00000014624	predicted gene 13826	protein-coding
common_peak2-29731-22-29--0.259606490521114-0.36542888694933	chr6	85137428	85138215	+	0	NA	promoter-TSS (NM_010131)	promoter-TSS (NM_010131)	-104	NM_010131	13796	Mm.391473	NM_010131		Emx1	-	empty spiracles homeobox 1	protein-coding
common_peak1-14553-32-63--0.72090798078034-1.53884632328361	chr3	35754089	35755042	+	0	NA	3' UTR (NM_029570, exon 30 of 30)	3' UTR (NM_029570, exon 30 of 30)	74431	NM_033623	114893	Mm.374810	NM_033623	ENSMUSG00000027708	Dcun1d1	Rp42|SCCRO|Tes3|pTes3	DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)	protein-coding
common_peak1-13331-91-22-2.54986998954532-19.9348516115737	chr19	43606172	43608566	+	0	NA	Intergenic	B3|SINE|B2	-8274	NM_010324	14718	Mm.19039	NM_010324	ENSMUSG00000025190	Got1	AI789014|Got-1|cAspAT|cCAT	glutamate oxaloacetate transaminase 1, soluble	protein-coding
unique_peak1-2594-11-1-2.50869358425161-2.83420869758413	chr16	31656099	31656690	+	0	NA	Intergenic	Intergenic	-7135	NM_001252435	13383	Mm.382	NM_007862	ENSMUSG00000022770	Dlg1	B130052P05Rik|Dlgh1|E-dlg/SAP97|SAP-97|SAP97|mKIAA4187	discs, large homolog 1 (Drosophila)	protein-coding
common_peak2-31353-110-173--0.0409457354700837-0.3111891625398	chr8	84659879	84662818	+	0	NA	Intergenic	L1M2|LINE|L1	265137	NM_001254747	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak1-12121-9-8-0.0196884049619079-1.03275496310833	chr17	26620651	26621179	+	0	NA	Intergenic	Intergenic	24502	NM_013642	19252	Mm.239041	NM_013642	ENSMUSG00000024190	Dusp1	3CH134|MKP1|Ptpn16|U19515|erp|mkp-1	dual specificity phosphatase 1	protein-coding
common_peak1-15414-95-100-0.489703862272219-1.89191528147712	chr4	86856383	86858104	+	0	NA	intron (NM_001110240, intron 1 of 9)	intron (NM_001110240, intron 1 of 9)	16624	NM_001110240	76376	Mm.490487	NM_172426	ENSMUSG00000037996	Slc24a2	2810021B17Rik|6330417K15Rik|AI847460|Nckx2	solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	protein-coding
unique_peak2-38615-9-21--1.26981821223308-1.37307999835977	chr7	80260981	80261770	+	0	NA	Intergenic	Intergenic	-14421	NR_046024	625243	Mm.261798	NR_046024		Gm6567	-	predicted gene 6567	ncRNA
unique_peak1-6810-9-3-1.18961340640422-1.57096726280955	chr8	72210092	72210687	+	0	NA	Intergenic	Intergenic	29996	NM_181274	66869	Mm.334581	NM_181274		Zfp869	1200003I07Rik	zinc finger protein 869	protein-coding
unique_peak2-37123-2-8--2.08737925770563-1.65811743852845	chr4	10848346	10848836	+	0	NA	Intergenic	Intergenic	46946	NM_026005	67157	Mm.440552	NM_026005	ENSMUSG00000059482	2610301B20Rik	AI428449	RIKEN cDNA 2610301B20 gene	protein-coding
common_peak2-32113-9-8-0.0196884049619079-1.03275496310833	chr9	101035002	101035427	+	0	NA	intron (NM_172144, intron 9 of 12)	L1Md_F2|LINE|L1	56728	NM_001100451	77853	Mm.326206	NM_001100451		Msl2	E130103E02Rik|Msl2l1|Rnf184	male-specific lethal 2 homolog (Drosophila)	protein-coding
common_peak1-12951-37-29-0.6191024758773-1.14508711250721	chr19	46038602	46039865	+	0	NA	intron (NM_198296, intron 8 of 25)	GA-rich|Low_complexity|Low_complexity	33745	NM_198296	71617	Mm.210949	NM_198296	ENSMUSG00000039901	9130011E15Rik	AI431055|AW050122	RIKEN cDNA 9130011E15 gene	protein-coding
unique_peak2-39778-5-5--0.289342836727009-0.909929411522249	chrX	7948089	7948473	+	0	NA	intron (NM_199066, intron 5 of 7)	intron (NM_199066, intron 5 of 7)	4177	NM_199066	387131	Mm.379565	NM_199066	ENSMUSG00000068218	Ssxb9	-	synovial sarcoma, X member B, breakpoint 9	protein-coding
unique_peak2-38147-5-7--0.704380336005853-1.01466476204226	chr6	85916488	85916849	+	0	NA	Intergenic	RMER1A|Other|Other	-5007	NM_028099	72102	Mm.24007	NM_028099	ENSMUSG00000030002	Dusp11	2010300F21Rik|AI481497	dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	protein-coding
common_peak2-20153-13-12-0.0780323124966764-0.334470287753051	chr1	168709551	168710141	+	0	NA	Intergenic	Intergenic	-97870	NM_172844	240894	Mm.246610	NM_172844	ENSMUSG00000026560	Fmo9	4831428F09Rik	flavin containing monooxygenase 9	protein-coding
unique_peak2-37586-4-5--0.608423014574403-0.909929411522249	chr5	38545005	38545389	+	0	NA	intron (NM_010942, intron 3 of 4)	intron (NM_010942, intron 3 of 4)	5509	NM_010942	18196	Mm.7414	NM_010942	ENSMUSG00000029126	Nsg1	Neep21|m234|p21	neuron specific gene family member 1	protein-coding
unique_peak2-37021-1-6--2.43441193227435-1.56314192529759	chr3	126659968	126660319	+	0	NA	intron (NM_178655, intron 11 of 24)	intron (NM_178655, intron 11 of 24)	-13839	NM_001034168	109676	Mm.220242	NM_178655	ENSMUSG00000032826	Ank2	AI835472|AW491075|Ank-2	ankyrin 2, brain	protein-coding
unique_peak1-5037-11-2-1.92373108353046-2.32232533660526	chr4	133090359	133090882	+	0	NA	intron (NM_010948, intron 4 of 7)	intron (NM_010948, intron 4 of 7)	11322	NM_010948	18221	Mm.69	NM_010948	ENSMUSG00000028851	Nudc	SIG-92|Silg92	nuclear distribution gene C homolog (Aspergillus)	protein-coding
common_peak2-28754-13-8-0.608547029195456-0.660903317613904	chr5	41904891	41905319	+	0	NA	Intergenic	L1_Mus2|LINE|L1	194289	NM_027295	100972	Mm.41555	NM_027295	ENSMUSG00000029128	Rab28	2700023P08Rik|AW496496	RAB28, member RAS oncogene family	protein-coding
common_peak1-18829-14-8-0.729291158915332-0.771068449301682	chr9	13424856	13425617	+	0	NA	exon (NM_001013813, exon 1 of 4)	exon (NM_001013813, exon 1 of 4)	803	NM_001013813	270118	Mm.116898	NM_173776	ENSMUSG00000031925	Maml2	5930431H10|BC032967	mastermind like 2 (Drosophila)	protein-coding
common_peak1-17141-101-119-0.347123641127901-1.22632423976857	chr6	116627901	116629524	+	0	NA	Intergenic	Intergenic	-4858	NM_178045	213391	Mm.257931	NM_178045	ENSMUSG00000042129	Rassf4	3830411C14Rik|AD037|AI586137	Ras association (RalGDS/AF-6) domain family member 4	protein-coding
unique_peak1-4113-9-4-0.867685311516858-1.36011389749466	chr2	83729755	83730187	+	0	NA	Intergenic	L1Md_A|LINE|L1	51412	NM_027964	71861	Mm.116957	NM_027964	ENSMUSG00000034552	Zswim2	1700025P14Rik|4933437F18Rik|MEX	zinc finger SWIM-type containing 2	protein-coding
unique_peak2-35799-1-6--2.43441193227435-1.56314192529759	chr18	60481176	60481599	+	0	NA	Intergenic	Intergenic	28353	NM_001101475	240328	Mm.329461	NM_001101475	ENSMUSG00000090942	F830016B08Rik	Ifgga4	RIKEN cDNA F830016B08 gene	protein-coding
common_peak1-13797-55-72-0.0147953122726845-0.30697942122102	chr2	39225535	39226598	+	0	NA	Intergenic	Intergenic	-144208	NM_024209	67857	Mm.389242	NM_024209		Ppp6c	2310003C10Rik	protein phosphatase 6, catalytic subunit	protein-coding
unique_peak2-33553-1-5--2.2120195109379-1.32905871926422	chr11	80476529	80476906	+	0	NA	intron (NM_177390, intron 12 of 21)	intron (NM_177390, intron 12 of 21)	116810	NM_177390	338367	Mm.151948	NM_177390	ENSMUSG00000035441	Myo1d	9930104H07Rik|AW544947|D11Ertd9e|myosin-1d	myosin ID	protein-coding
unique_peak1-5265-17-3-2.21829633820504-3.11807310444576	chr5	64500430	64501250	+	0	NA	intron (NM_025700, intron 10 of 13)	intron (NM_025700, intron 10 of 13)	16651	NM_025700	66681	Mm.2325	NM_025700	ENSMUSG00000029171	Pgm1	3230402E02Rik|Pgm-1|Pgm2	phosphoglucomutase 1	protein-coding
common_peak1-17013-24-26-0.0383224006042484-0.317118655902073	chr6	90987602	90988630	+	0	NA	intron (NM_018815, intron 25 of 39)	intron (NM_018815, intron 25 of 39)	78704	NM_018815	54563	Mm.28162	NM_018815	ENSMUSG00000030091	Nup210	9830001L10|AI836801|Pom210|gp190|gp210	nucleoporin 210	protein-coding
common_peak2-23874-16-17--0.0516613591742505-0.301029995663984	chr15	103239766	103240303	+	0	NA	intron (NM_028797, intron 7 of 8)	intron (NM_028797, intron 7 of 8)	20824	NM_028797	74174	Mm.325325	NM_028797	ENSMUSG00000022487	Gtsf1	1700006H03Rik|Cue110	gametocyte specific factor 1	protein-coding
unique_peak2-33619-12-21--0.810655633549659-0.713635438203849	chr11	95824535	95825520	+	0	NA	promoter-TSS (NR_037223)	promoter-TSS (NR_037223)	-330	NR_037223	100526468		NR_037223	miRBase:MI0014025	Mir3063	mmu-mir-3063	microRNA 3063	ncRNA
common_peak2-24058-15-8-0.842239749113344-0.891319708951327	chr16	25835157	25835639	+	0	NA	intron (NM_001127261, intron 4 of 10)	intron (NM_001127261, intron 4 of 10)	33396	NM_001127264	22061	Mm.20894	NM_011641	ENSMUSG00000022510	Trp63	AI462811|Ket|P51/P63|P63|P73l|Tp63|Trp53rp1	transformation related protein 63	protein-coding
unique_peak2-36472-5-9--1.02630843089322-1.21398586181642	chr2	146532654	146533058	+	0	NA	Intergenic	RMER17B|LTR|ERVK	-148769	NM_001033298	228730	Mm.292352	NM_001033298	ENSMUSG00000074749	Kiz	Gm114|Ncrna00153|Plk1s1	kizuna centrosomal protein	protein-coding
common_peak1-18393-9-2-1.60465090568306-1.87199725847353	chr8	71476186	71476597	+	0	NA	Intergenic	L1MA8|LINE|L1	71937	NM_008509	16956	Mm.1514	NM_008509	ENSMUSG00000015568	Lpl	-	lipoprotein lipase	protein-coding
common_peak2-22123-6-7--0.434601889619698-0.97990265578305	chr12	84285434	84285821	+	0	NA	Intergenic	B3A|SINE|B2	-245485	NR_046045	74283	Mm.398247	NR_046045		1700085C21Rik	-	RIKEN cDNA 1700085C21 gene	ncRNA
common_peak2-22563-13-12-0.0780323124966764-0.334470287753051	chr13	63253410	63253961	+	0	NA	intron (NM_001289926, intron 5 of 15)	Lx4B|LINE|L1	-87653	NR_110520	72061	Mm.188105	NM_028079	ENSMUSG00000021458	2010111I01Rik	2300006M17Rik|AP-O|Aopep	RIKEN cDNA 2010111I01 gene	protein-coding
unique_peak2-38048-5-8--0.874305337448166-1.10484139239135	chr6	41555009	41555448	+	0	NA	promoter-TSS (NM_001146351)	promoter-TSS (NM_001146351)	-253	NM_001146351	13848	Mm.271976	NM_007680	ENSMUSG00000029869	Ephb6	Cekl|Mep	Eph receptor B6	protein-coding
common_peak1-15342-14-16--0.188246680892695-0.308035960714963	chr4	53011615	53012247	+	0	NA	intron (NM_028529, intron 4 of 6)	L1Md_T|LINE|L1	9775	NM_028529	73398	Mm.252738	NM_028529	ENSMUSG00000015242	Nipsnap3a	1700054F22Rik|AI429120	nipsnap homolog 3A (C. elegans)	protein-coding
common_peak2-20051-19-14-0.495796731053168-0.607095980551316	chr1	150099173	150099899	+	0	NA	Intergenic	L1_Mus3|LINE|L1	1708878	NM_008869	18783	Mm.4186	NM_008869	ENSMUSG00000056220	Pla2g4a	Pla2g4|cPLA2|cPLA2alpha	phospholipase A2, group IVA (cytosolic, calcium-dependent)	protein-coding
common_peak1-7834-41-51-0.000708986707568471-0.303138254425616	chr1	128243923	128245007	+	0	NA	intron (NM_172484, intron 3 of 14)	B4A|SINE|B4	145039	NM_172484	210356	Mm.377234	NM_172484	ENSMUSG00000049690	Nckap5	8430408F21|D130011D22Rik|E030049G20Rik|Erih1|Erih2|Gm1548|Nap5	NCK-associated protein 5	protein-coding
common_peak2-28886-33-42--0.0949271921765691-0.311623594475992	chr5	88564608	88566223	+	0	NA	Intergenic	Intergenic	49834	NM_001252680	20600	Mm.1397	NM_021289	ENSMUSG00000029281	Smr2	MSG2|Vcs2	submaxillary gland androgen regulated protein 2	protein-coding
common_peak2-31983-16-24--0.525592547506663-0.561823156887258	chr9	70012470	70013010	+	0	NA	Intergenic	Intergenic	-23376	NM_029784	76886	Mm.44355	NM_029784	ENSMUSG00000032224	Fam81a	6430514L14Rik	family with sequence similarity 81, member A	protein-coding
common_peak2-24013-17-15-0.218296338205038-0.403453972741633	chr16	21339597	21340096	+	0	NA	Intergenic	Intergenic	-42901	NR_046162	328646	Mm.404748	NR_046162	ENSMUSG00000096918	Gm16863	A830060N17	predicted gene, 16863	ncRNA
unique_peak1-282-8-4-0.683294323060208-1.21878474469819	chr1	106619281	106619782	+	0	NA	Intergenic	L1_Rod|LINE|L1	-45865	NM_011800	23836	Mm.103640	NM_011800	ENSMUSG00000050840	Cdh20	Cdh7	cadherin 20	protein-coding
unique_peak2-38088-5-8--0.874305337448166-1.10484139239135	chr6	54681551	54682106	+	0	NA	Intergenic	MIRm|SINE|MIR	50210	NM_001289740	68235	Mm.233860	NM_026629	ENSMUSG00000038065	Mturn	2410066E13Rik|AI448550|B230212L03Rik	maturin, neural progenitor differentiation regulator homolog (Xenopus)	protein-coding
common_peak1-15303-11-9-0.186765489364251-0.344532117358383	chr4	43492877	43493537	+	0	NA	Intergenic	B3|SINE|B2	3374	NM_019436	54390	Mm.31775	NM_019436	ENSMUSG00000028460	Sit1	Sit	suppression inducing transmembrane adaptor 1	protein-coding
unique_peak2-33652-3-5--0.998945590680433-0.96108193396963	chr11	99583038	99583473	+	0	NA	Intergenic	RLTR21|LTR|ERVK	50972	NM_001126322	100040276	Mm.475095	NM_001126322	ENSMUSG00000078668	Gm11595	OTTMUSG00000002543	predicted gene 11595	protein-coding
common_peak2-27807-20-19-0.16614668970383-0.348739088570342	chr3	144505949	144506620	+	0	NA	intron (NM_139148, intron 5 of 13)	L1MA5|LINE|L1	5982	NM_139148	229927	Mm.290600	NM_139148	ENSMUSG00000037033	Clca4	-	chloride channel calcium activated 4	protein-coding
unique_peak1-6044-15-6-1.20480982849805-1.32521814697968	chr6	115317980	115318872	+	0	NA	intron (NM_001127330, intron 1 of 7)	intron (NM_001127330, intron 1 of 7)	7187	NM_001127330	19016	Mm.3020	NM_011146	ENSMUSG00000000440	Pparg	Nr1c3|PPAR-gamma|PPAR-gamma2|PPARgamma|PPARgamma2	peroxisome proliferator activated receptor gamma	protein-coding
unique_peak2-34095-5-8--0.874305337448166-1.10484139239135	chr13	13025668	13026194	+	0	NA	Intergenic	L1_Mus1|LINE|L1	71666	NM_031191	18811	Mm.88796	NM_031191	ENSMUSG00000079092	Prl2c2	MRP-1|PLF-1|Plf|Plf1	prolactin family 2, subfamily c, member 2	protein-coding
common_peak1-17039-11-7-0.508693584251613-1.21681515183528	chr6	93260705	93261477	+	0	NA	Intergenic	Intergenic	370515	NR_015530	330385	Mm.483472	NR_015530	ENSMUSG00000097462	9530026P05Rik	B430306B02	RIKEN cDNA 9530026P05 gene	ncRNA
common_peak2-24740-12-10-0.189344366450341-0.386243247519795	chr17	48001703	48002157	+	0	NA	Intergenic	B3|SINE|B2	-30290	NM_001109973	17240	Mm.329100	NM_010783	ENSMUSG00000032717	Mdfi	I-mf|I-mfa	MyoD family inhibitor	protein-coding
common_peak1-15941-27-36--0.217907414733714-0.352152970649951	chr5	29378457	29379379	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-143615	NM_021470	56874	Mm.87352	NM_021470	ENSMUSG00000029130	Rnf32	1700009J01Rik|2700025B22Rik|4930542N22Rik|Lmbr2	ring finger protein 32	protein-coding
common_peak2-22450-25-45--0.661712050711907-1.05820747366651	chr13	42051711	42052941	+	0	NA	Intergenic	Lx8|LINE|L1	91042	NR_033545	100038577	Mm.387093	NR_033545		Gm10790	ENSMUSG00000074927	predicted gene 10790	ncRNA
common_peak2-26416-13-15--0.221527969362231-0.308519316180257	chr2	59881931	59882703	+	0	NA	intron (NM_001001182, intron 2 of 35)	PB1D9|SINE|Alu	81480	NM_001001182	407823	Mm.228071	NM_001001182	ENSMUSG00000026987	Baz2b	5830435C13Rik|BC053917|D2Ertd794e	bromodomain adjacent to zinc finger domain, 2B	protein-coding
common_peak2-30045-64-77-0.180044182846355-0.460389472422342	chr6	127149097	127150084	+	0	NA	intron (NR_040273, intron 2 of 2)	intron (NR_040273, intron 2 of 2)	-48524	NM_009829	12444	Mm.333406	NM_009829	ENSMUSG00000000184	Ccnd2	2600016F06Rik|AI256817|BF642806|C86853|Vin-1|Vin1|cD2	cyclin D2	protein-coding
common_peak1-9966-26-35--0.24202590928385-0.384630725886657	chr12	112796321	112797512	+	0	NA	Intergenic	Intergenic	15697	NR_045295	100504687	Mm.26072	NR_045295	ENSMUSG00000096995	2810029C07Rik	AU017849	RIKEN cDNA 2810029C07 gene	ncRNA
unique_peak1-2798-13-5-1.19350952991661-1.95509489018123	chr17	14075248	14075844	+	0	NA	Intergenic	Intergenic	-9834	NM_001122977	635895	Mm.388844	NM_001122977	ENSMUSG00000067941	Gm7168	EG635895	predicted gene 7168	protein-coding
common_peak2-28258-11-9-0.186765489364251-0.344532117358383	chr4	126217091	126217579	+	0	NA	Intergenic	B4|SINE|B4	-6633	NM_153177	76850	Mm.86705	NM_153177	ENSMUSG00000042500	Ago4	5730550L01Rik|AI481660|Eif2c4	argonaute RISC catalytic subunit 4	protein-coding
unique_peak1-7269-20-4-2.16614668970383-3.28004177908661	chr9	96437635	96438470	+	0	NA	Intergenic	Intergenic	-59038	NM_011279	19823	Mm.28235	NM_011279	ENSMUSG00000051234	Rnf7	Rbx2|SAG	ring finger protein 7	protein-coding
common_peak1-8680-78-50-1.13439575218904-5.587375693184	chr11	8634087	8636970	+	0	NA	Intergenic	MMETn-int|LTR|ERVK	-70990	NM_001083587	319939	Mm.337820	NM_001083587	ENSMUSG00000020422	Tns3	BC023928|F830010I22Rik|TEM6|Tens1	tensin 3	protein-coding
common_peak2-28610-13-13--0.0288828914198356-0.309074325783021	chr5	24423888	24424547	+	0	NA	intron (NM_145401, intron 4 of 15)	B3|SINE|B2	-9890	NM_001170556	108099	Mm.33649	NM_145401	ENSMUSG00000028944	Prkag2	2410051C13Rik|AAKG|AAKG2|AI854673|H91620p|WPWS	protein kinase, AMP-activated, gamma 2 non-catalytic subunit	protein-coding
unique_peak2-35449-3-4--0.73591118484664-0.864171920961574	chr17	35771220	35771506	+	0	NA	Intergenic	Intergenic	-7781	NM_001244654	672682	Mm.454025	NM_001244654	ENSMUSG00000090588	Gm9573	Muc21	predicted gene 9573	protein-coding
unique_peak2-37082-8-22--1.51833953810944-1.77631109801764	chr3	151323015	151323596	+	0	NA	Intergenic	L1Md_F2|LINE|L1	89618	NM_133871	99899	Mm.30756	NM_133871	ENSMUSG00000028037	Ifi44	A430056A10Rik|AW261460|MTAP44|p44	interferon-induced protein 44	protein-coding
common_peak2-21235-10-13--0.450939577048835-0.386243247519795	chr11	67860382	67861085	+	0	NA	intron (NM_018768, intron 6 of 7)	intron (NM_018768, intron 6 of 7)	80748	NM_018768	55943	Mm.3973	NM_018768	ENSMUSG00000020903	Stx8	0610007H08Rik|1110002H11Rik|4930571E13Rik|CARB	syntaxin 8	protein-coding
common_peak1-19300-9-6-0.382258484346616-1.11707584880836	chr9	121705348	121705874	+	0	NA	Intergenic	MIR|SINE|MIR	-3986	NM_029095	74770	Mm.44195	NM_029095	ENSMUSG00000032523	Hhatl	1110011D13Rik|Gup1	hedgehog acyltransferase-like	protein-coding
common_peak1-12156-30-37--0.0782521039517121-0.304004708442489	chr17	28621622	28622738	+	0	NA	intron (NM_010220, intron 1 of 10)	intron (NM_010220, intron 1 of 10)	914	NM_010220	14229	Mm.276405	NM_010220	ENSMUSG00000024222	Fkbp5	D17Ertd592e|Dit1|FKBP-5|FKBP51	FK506 binding protein 5	protein-coding
unique_peak2-39944-4-9--1.34538860874061-1.36011389749466	chrX	134276406	134276885	+	0	NA	intron (NM_030688, intron 2 of 10)	intron (NM_030688, intron 2 of 10)	170557	NM_030688	60367	Mm.328321	NM_030688	ENSMUSG00000059203	Il1rapl2	-	interleukin 1 receptor accessory protein-like 2	protein-coding
common_peak1-8823-60-104--0.359953656045591-0.867404747169945	chr11	22859004	22860990	+	0	NA	intron (NM_144514, intron 1 of 2)	B4A|SINE|B4	-12008	NM_011663	22183	Mm.29542	NM_011663	ENSMUSG00000044068	Zrsr1	D11Ncvs75|Irlgs2|SP2|U2af1-rs1|U2afbp-rs	zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1	protein-coding
unique_peak2-34887-8-5-0.420259917226415-1.10484139239135	chr15	80027190	80027609	+	0	NA	intron (NM_010795, intron 1 of 1)	intron (NM_010795, intron 1 of 1)	23248	NM_010795	17309	Mm.299693	NM_010795	ENSMUSG00000042428	Mgat3	1110038J12Rik|AI848272|GnT-III	mannoside acetylglucosaminyltransferase 3	protein-coding
common_peak1-12168-7-9--0.522837264589173-1.05908390183068	chr17	29485301	29485733	+	0	NA	promoter-TSS (NM_019880)	promoter-TSS (NM_019880)	-668	NM_019880	56462	Mm.285322	NM_019880	ENSMUSG00000024012	Mtch1	2310034O17Rik|AI255158|AU018396|C77849|PSAP	mitochondrial carrier homolog 1 (C. elegans)	protein-coding
common_peak2-21220-119-170-0.120585406244146-0.457233432536808	chr11	62456478	62459285	+	0	NA	intron (NM_198861, intron 1 of 3)	intron (NM_198861, intron 1 of 3)	4144	NM_198861	192976	Mm.339972	NM_198861	ENSMUSG00000046417	Lrrc75a	Fam211a	leucine rich repeat containing 75A	protein-coding
common_peak1-18828-11-11--0.0762689164695427-0.301029995663976	chr9	13323800	13324280	+	0	NA	Intergenic	Intergenic	89459	NR_028271	18689	Mm.41972	NM_008835		Phxr4	Sp5	per-hexamer repeat gene 4	ncRNA
common_peak2-21587-9-7-0.18961340640422-1.05908390183068	chr11	98358381	98358775	+	0	NA	intron (NM_011771, intron 3 of 7)	intron (NM_011771, intron 3 of 7)	48767	NM_011771	22780	Mm.133367	NM_011771	ENSMUSG00000018168	Ikzf3	5830411O07Rik|Aiolos|Zfpn1a3|Znfn1a3	IKAROS family zinc finger 3	protein-coding
unique_peak1-1473-12-0-3.64877598508764-4.21441993929574	chr12	111456322	111456928	+	0	NA	Intergenic	ID_B1|SINE|B4	59653	NR_002866	353504	Mm.442720	NR_002866	ENSMUSG00000097758	Dio3os	AW556460|Dio3as	deiodinase, iodothyronine type III, opposite strand	ncRNA
common_peak2-24524-6-32--2.47899600897815-4.54209996799533	chr17	26715715	26716293	+	0	NA	intron (NM_026170, intron 1 of 9)	intron (NM_026170, intron 1 of 9)	17547	NM_026170	67458	Mm.30496	NM_026170	ENSMUSG00000001576	Ergic1	1200007D18Rik|maa-136	endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1	protein-coding
common_peak2-23977-8-6-0.197867495889966-1.03789460276074	chr16	17733447	17733774	+	0	NA	Intergenic	Intergenic	-10570	NM_001040683	94112	Mm.208970	NM_033609	ENSMUSG00000012114	Med15	A230074L19Rik|AW536074|Pcqap|mPcqap	mediator complex subunit 15	protein-coding
common_peak2-26772-95-114-0.302425294079639-0.9673757205616	chr2	143914204	143916356	+	0	NA	Intergenic	Intergenic	56442	NM_207275	403171	Mm.389362	NM_207275	ENSMUSG00000037307	Banf2	4930517K23Rik|Baf-L|Baf-like|Gm115	barrier to autointegration factor 2	protein-coding
common_peak2-21806-43-23-1.19760068480255-3.2376787981851	chr11	118409777	118410566	+	0	NA	intron (NM_001285436, intron 3 of 13)	(TG)n|Simple_repeat|Simple_repeat	71897	NM_172573	217364	Mm.473963	NM_172573	ENSMUSG00000033857	Engase	C130099A03|D230014K01Rik	endo-beta-N-acetylglucosaminidase	protein-coding
unique_peak2-32838-2-6--1.72480917832092-1.26211192963361	chr1	192136097	192136506	+	0	NA	Intergenic	Intergenic	-141742	NM_008937	19130	Mm.132579	NM_008937	ENSMUSG00000010175	Prox1	A230003G05Rik	prospero homeobox 1	protein-coding
common_peak2-28810-15-13-0.204809828498052-0.368541233333383	chr5	64970154	64970557	+	0	NA	Intergenic	Intergenic	31583	NR_045078	100042198	Mm.25191	NR_045078		Gm3716	Gm1683	predicted gene 3716	ncRNA
unique_peak1-1088-22-1-3.6472841050874-6.28700305248716	chr11	88050585	88051496	+	0	NA	Intergenic	B1_Mur4|SINE|Alu	33150	NM_001291271	64656	Mm.168680	NM_024174	ENSMUSG00000023723	Mrps23	D11Bwg1153e|MRP-S23|Rpms23|S23mt	mitochondrial ribosomal protein S23	protein-coding
common_peak1-16885-35-38-0.145968039600255-0.368093376636814	chr6	71440840	71441788	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-2574	NM_009543	22644	Mm.422969	NM_009543	ENSMUSG00000052656	Rnf103	AW146237|AW212918|Zfp103|kf-1	ring finger protein 103	protein-coding
common_peak1-18843-23-36--0.48768586111987-0.652802052802678	chr9	15493367	15494106	+	0	NA	Intergenic	Intergenic	-20477	NM_172289	234967	Mm.138815	NM_172289	ENSMUSG00000043885	Slc36a4	6330573I15Rik|PAT4	solute carrier family 36 (proton/amino acid symporter), member 4	protein-coding
unique_peak2-38547-4-6--0.830815435910851-0.989110657569874	chr7	52039373	52039679	+	0	NA	Intergenic	RLTR20B3|LTR|ERVK	31502	NM_030693	107503	Mm.389890	NM_030693	ENSMUSG00000038539	Atf5	AFTA|Atf7|Atfx|ODA-10	activating transcription factor 5	protein-coding
common_peak1-16500-29-55--0.695064841442493-1.27423323032613	chr5	139371458	139372381	+	0	NA	Intergenic	Intergenic	75885	NM_001195128	384244	Mm.485002	NM_001195128	ENSMUSG00000094504	Gm5294	EG384244	predicted gene 5294	protein-coding
common_peak1-9367-52-40-0.750707985647615-1.9967981614991	chr11	97781302	97782782	+	0	NA	Intergenic	Intergenic	-36574	NM_001081435	72973	Mm.245939	NM_001081435		Fbxo47	2900052P03Rik|Gm1562	F-box protein 47	protein-coding
common_peak2-28521-20-27--0.319280137466411-0.412012472183092	chr5	96796491	96797530	+	0	NA	Intergenic	Intergenic	-5964	NM_175473	231470	Mm.291120	NM_175473	ENSMUSG00000034687	Fras1	E130113P14Rik|bl|mKIAA1500	Fraser syndrome 1 homolog (human)	protein-coding
common_peak2-26425-48-64--0.0514406617936398-0.302739834127522	chr2	60962093	60963716	+	0	NA	Intergenic	Intergenic	-149696	NR_045335	100038493	Mm.388076	NR_045335	ENSMUSG00000075325	Gm13582	ENSMUSG00000075325|OTTMUSG00000012844	predicted gene 13582	ncRNA
common_peak2-24892-17-9-0.896368243317676-1.09394599973099	chr17	84070436	84070805	+	0	NA	Intergenic	Intergenic	-34883	NM_001171054	116871	Mm.277668	NM_054082	ENSMUSG00000055817	Mta3	1110002J22Rik|mKIAA1266	metastasis associated 3	protein-coding
common_peak1-17322-11-9-0.186765489364251-0.344532117358383	chr6	145792574	145793006	+	0	NA	Intergenic	L1Md_F2|LINE|L1	21150	NM_001271768	79362	Mm.154529	NM_024469	ENSMUSG00000030256	Bhlhe41	6430520M22Rik|Bhlhb2l|Bhlhb3|DEC2|Sharp1	basic helix-loop-helix family, member e41	protein-coding
unique_peak1-6020-10-1-2.35641534500877-2.57096726280955	chr6	112359344	112359872	+	0	NA	Intergenic	MLT1A1|LTR|MaLR	-21591	NM_175525	243612	Mm.122653	NM_175525	ENSMUSG00000034387	Ssu2	D630042P16Rik|Fls485|Ssuh2	ssu-2 homolog (C. elegans)	protein-coding
common_peak2-27798-5-7--0.704380336005853-1.01466476204226	chr3	138815283	138815655	+	0	NA	Intergenic	RMER1A|Other|Other	-53388	NM_198659	381476	Mm.188334	NM_198659	ENSMUSG00000047940	Stpg2	B930007M17Rik|Gm1017	sperm tail PG rich repeat containing 2	protein-coding
unique_peak2-33065-4-7--1.02346051385325-1.09384600808989	chr10	77570476	77570903	+	0	NA	Intergenic	Intergenic	38576	NM_015790	50723	Mm.17819	NM_015790	ENSMUSG00000000732	Icosl	AU044799|B7-H2|B7RP-1|B7h|BG071784|GI50|GL50|GL50-B|ICOS-L|Icoslg|LICOS|Ly115l|mKIAA0653	icos ligand	protein-coding
common_peak1-8990-11-15--0.491306415748387-0.435191258261915	chr11	59661810	59662236	+	0	NA	intron (NM_134029, intron 1 of 4)	intron (NM_134029, intron 1 of 4)	448	NM_134029	103850	Mm.41761	NM_134029	ENSMUSG00000032615	Nt5m	2010013E09Rik|AI846937|dNT-2	5',3'-nucleotidase, mitochondrial	protein-coding
common_peak1-15322-8-25--1.69521730019352-2.29727994934156	chr4	45972263	45972778	+	0	NA	Intergenic	(GA)n|Simple_repeat|Simple_repeat	-5687	NM_001290475	100121	Mm.275413	NM_146142	ENSMUSG00000035517	Tdrd7	5730495N10Rik|AI447470|PCTAIRE2BP	tudor domain containing 7	protein-coding
common_peak1-11185-59-65-0.280969881514125-0.638586184011	chr15	76903698	76905238	+	0	NA	Intergenic	Intergenic	-10360	NR_108037	74303	Mm.444304	NR_108037	ENSMUSG00000097267	1700109K24Rik	4933425G21Rik	RIKEN cDNA 1700109K24 gene	ncRNA
common_peak1-8913-91-120-0.154568708327743-0.492741151861452	chr11	51262599	51264086	+	0	NA	intron (NM_153393, intron 2 of 28)	intron (NM_153393, intron 2 of 28)	-134917	NM_028398	72947	Mm.256875	NM_028398		Phykpl	2900006B13Rik|Agxt2l2	5-phosphohydroxy-L-lysine phospholyase	protein-coding
common_peak1-18311-18-39--1.00900894365901-1.65365064026544	chr8	46869509	46870469	+	0	NA	intron (NM_172752, intron 12 of 22)	intron (NM_172752, intron 12 of 22)	34662	NR_045739	319940	Mm.441720	NR_045739	ENSMUSG00000085440	Sorbs2os	D330022K07Rik	sorbin and SH3 domain containing 2, opposite strand	ncRNA
unique_peak1-3865-11-6-0.701338662194009-1.32595962126035	chr2	9791662	9792335	+	0	NA	intron (NM_008091, intron 3 of 5)	intron (NM_008091, intron 3 of 5)	8229	NM_008091	14462	Mm.313866	NM_008091	ENSMUSG00000015619	Gata3	Gata-3|jal	GATA binding protein 3	protein-coding
common_peak1-16618-83-74-0.685403934610246-2.78530700283201	chr6	34865148	34867700	+	0	NA	Intergenic	Intergenic	-4536	NM_009292	20899	Mm.5171	NM_009292	ENSMUSG00000029848	Stra8	-	stimulated by retinoic acid gene 8	protein-coding
common_peak1-10846-19-8-1.23276232521937-1.61268301619756	chr14	118566529	118567434	+	0	NA	Intergenic	L1Md_A|LINE|L1	30632	NM_021434	58245	Mm.275411	NM_021434	ENSMUSG00000022131	Gpr180	AB041545|E130016I23Rik|Itr	G protein-coupled receptor 180	protein-coding
common_peak2-29666-72-61-0.714387502485443-2.56467722642014	chr6	72244509	72246585	+	0	NA	Intergenic	Intergenic	-9057	NM_001282071	20388	Mm.46033	NM_147779	ENSMUSG00000056370	Sftpb	AI562151|SF-B|SP-B|Sftp-3|Sftp3	surfactant associated protein B	protein-coding
common_peak2-22035-25-36--0.347603460283844-0.465043498729215	chr12	69183556	69185213	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-414126	NR_033146	100316870	Mm.379794	NR_033146		Gm17821	-	DDB1 and CUL4 associated factor 5 pseudogene	pseudo
common_peak1-13957-62-47-0.825788958080929-2.71043851283094	chr2	91709858	91711172	+	0	NA	intron (NM_172669, intron 11 of 17)	B1_Mus1|SINE|Alu	-51831	NM_007699	12672	Mm.330405	NM_007699	ENSMUSG00000040495	Chrm4	Chrm-4|M4	cholinergic receptor, muscarinic 4	protein-coding
common_peak1-8375-14-9-0.577288065470282-0.630231561310125	chr10	60934846	60935557	+	0	NA	Intergenic	Intergenic	-3380	NM_153542	216011	Mm.136116	NM_153542	ENSMUSG00000037151	Lrrc20	BC036304	leucine rich repeat containing 20	protein-coding
common_peak1-8424-8-17--1.16470258349474-1.02063122982878	chr10	76442393	76442770	+	0	NA	Intergenic	Intergenic	-17889	NM_021568	59093	Mm.272803	NM_021568	ENSMUSG00000001120	Pcbp3	AlphaCP-3	poly(rC) binding protein 3	protein-coding
unique_peak2-35157-5-17--1.87430533744817-1.80287260729378	chr16	33776807	33777295	+	0	NA	Intergenic	Intergenic	-17072	NM_010739	17063	Mm.3177	NM_010739	ENSMUSG00000022824	Muc13	114/A10|14/A10|AI159736|Lrrp|Ly64|NJ-1	mucin 13, epithelial transmembrane	protein-coding
unique_peak2-35696-6-11--1.01956439034085-1.32595962126035	chr18	24603874	24604406	+	0	NA	Intergenic	ID_B1|SINE|B4	-16469	NR_029573	387182		NR_029573	miRBase:MI0000229	Mir187	Mirn187|mmu-mir-187	microRNA 187	ncRNA
common_peak2-20446-54-102--0.513414765553485-1.42983730279126	chr10	39612501	39614366	+	0	NA	intron (NR_033628, intron 3 of 3)	intron (NR_033628, intron 3 of 3)	5611	NR_033628	213332	Mm.484359	NR_033628		AA474331	-	expressed sequence AA474331	pseudo
common_peak2-29400-10-8-0.186490343566457-1.078512453669	chr6	91012783	91013163	+	0	NA	intron (NM_018815, intron 14 of 39)	intron (NM_018815, intron 14 of 39)	53847	NM_018815	54563	Mm.28162	NM_018815	ENSMUSG00000030091	Nup210	9830001L10|AI836801|Pom210|gp190|gp210	nucleoporin 210	protein-coding
common_peak2-25517-21-25--0.130950452874856-0.305461879681376	chr19	5729130	5729734	+	0	NA	TTS (NM_020491)	TTS (NM_020491)	234	NM_181452	17826	Mm.391142	NM_023166	ENSMUSG00000024939	Fam89b	1110021A21Rik|MMTV|Mtvr2	family with sequence similarity 89, member B	protein-coding
common_peak2-21553-25-25-0.161410187204014-0.36542888694933	chr11	96830091	96830823	+	0	NA	intron (NM_030220, intron 1 of 6)	intron (NM_030220, intron 1 of 6)	8545	NM_030220	78912	Mm.491183	NM_030220	ENSMUSG00000018678	Sp2	4930480I16Rik|mKIAA0048	Sp2 transcription factor	protein-coding
unique_peak2-38913-11-12--0.191746133889479-0.310474156842889	chr8	13907636	13908265	+	0	NA	intron (NM_025785, intron 1 of 9)	CpG	144	NM_025785	66822	Mm.37950	NM_025785	ENSMUSG00000038365	Fbxo25	9130015I06Rik|AI649137|Fbx25	F-box protein 25	protein-coding
unique_peak1-633-9-6-0.382258484346616-1.11707584880836	chr10	34071478	34071870	+	0	NA	intron (NM_176968, intron 6 of 11)	intron (NM_176968, intron 6 of 11)	-38113	NM_009925	12813	Mm.443177	NM_009925	ENSMUSG00000039462	Col10a1	Col10|Col10a-1	collagen, type X, alpha 1	protein-coding
common_peak1-18174-25-53--0.893037596818362-1.84891677255723	chr8	14608120	14609194	+	0	NA	intron (NM_172910, intron 4 of 15)	intron (NM_172910, intron 4 of 15)	-279879	NM_012000	26889	Mm.254027	NM_012000	ENSMUSG00000026317	Cln8	mnd	ceroid-lipofuscinosis, neuronal 8	protein-coding
unique_peak1-584-7-1-1.79909083029819-1.80617997398389	chr10	8772558	8773079	+	0	NA	Intergenic	Intergenic	-166950	NM_175155	70097	Mm.338275	NM_175155	ENSMUSG00000015305	Sash1	1100001C18Rik|2500002E12Rik|A330076K04Rik|mKIAA0790	SAM and SH3 domain containing 1	protein-coding
common_peak2-28701-29-29-0.205399485006592-0.423354874519384	chr5	34335506	34336209	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	-2776	NM_001001985	269642	Mm.274610	NM_001001985	ENSMUSG00000048142	Nat8l	1110038O08Rik|Shati	N-acetyltransferase 8-like	protein-coding
common_peak1-10354-12-10-0.189344366450341-0.386243247519795	chr13	84221644	84222127	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-140016	NR_029418	72745	Mm.295063	NM_175187	ENSMUSG00000035762	Tmem161b	2810446P07Rik|AI843389	transmembrane protein 161B	protein-coding
common_peak1-15535-17-15-0.218296338205038-0.403453972741633	chr4	118544556	118545108	+	0	NA	Intergenic	Intergenic	3444	NM_001011856	258159	Mm.388910	NM_001011856	ENSMUSG00000073769	Olfr1331	MOR259-3P	olfactory receptor 1331	protein-coding
common_peak2-26196-12-8-0.478850983645327-0.562038191119709	chr2	25365286	25365834	+	0	NA	Intergenic	Intergenic	-8321	NM_001271777	69379	Mm.24596	NM_027062	ENSMUSG00000015083	C8g	-	complement component 8, gamma polypeptide	protein-coding
common_peak2-25508-39-53--0.139126255244315-0.335101043913478	chr19	5490304	5491539	+	0	NA	intron (NM_007687, intron 1 of 3)	CpG	466	NM_007687	12631	Mm.329655	NM_007687		Cfl1	AA959946|Cof|n-cofilin	cofilin 1, non-muscle	protein-coding
common_peak1-16302-11-3-1.50869358425161-1.95434855131066	chr5	114127104	114127680	+	0	NA	Intergenic	7SK|RNA|RNA	-26993	NM_008153	14747	Mm.5196	NM_008153	ENSMUSG00000042190	Cmklr1	ChemR23|DEZ|Gpcr27|mcmklr1	chemokine-like receptor 1	protein-coding
common_peak1-16972-28-11-1.46799661910031-2.80071159219767	chr6	86497160	86498244	+	0	NA	intron (NR_037960, intron 3 of 4)	intron (NR_037960, intron 3 of 4)	20307	NR_037961	72012	Mm.349174	NR_037960	ENSMUSG00000097048	1600020E01Rik	-	RIKEN cDNA 1600020E01 gene	ncRNA
common_peak1-12194-19-21--0.0567442919756109-0.301029995663971	chr17	32349905	32350705	+	0	NA	intron (NM_001286630, intron 10 of 19)	intron (NM_001286630, intron 10 of 19)	-23897	NM_001033163	71932	Mm.176240	NM_001033163	ENSMUSG00000037577	Ephx3	2310063B19Rik|Abhd9	epoxide hydrolase 3	protein-coding
unique_peak1-4223-8-0-3.00522241794757-2.70926996097583	chr2	122395639	122396119	+	0	NA	Intergenic	Intergenic	41134	NM_025961	67092	Mm.29975	NM_025961	ENSMUSG00000027199	Gatm	1810003P21Rik|AI314789|AT	glycine amidinotransferase (L-arginine:glycine amidinotransferase)	protein-coding
common_peak2-29720-20-13-0.680719862533589-0.809260849721102	chr6	84233640	84234242	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	139891	NR_046063	100038556	Mm.387783	NR_046063		Gm10445	ENSMUSG00000072956	predicted gene 10445	ncRNA
common_peak1-10140-14-12-0.198776442216552-0.373562084705529	chr13	34080119	34080749	+	0	NA	TTS (NM_001163239)	TTS (NM_001163239)	14229	NM_001243192	20719	Mm.252210	NM_009254	ENSMUSG00000060147	Serpinb6a	4930482L21Rik|D330015H01Rik|PI-6|Serpinb6|Spi3|ovalbumin	serine (or cysteine) peptidase inhibitor, clade B, member 6a	protein-coding
common_peak2-24415-32-55--0.528262902837944-0.895298945923416	chr17	15825336	15826669	+	0	NA	Intergenic	MT2B|LTR|ERVL	-15929	NM_007690	12648	Mm.8137	NM_007690	ENSMUSG00000023852	Chd1	4930525N21Rik|AI851787|AW555109	chromodomain helicase DNA binding protein 1	protein-coding
unique_peak1-3469-10-3-1.35641534500877-1.75805390616669	chr19	10032782	10033249	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	-22075	NR_073181	14319	Mm.1776	NM_010239	ENSMUSG00000024661	Fth1	FHC|Fth|HFt|MFH	ferritin heavy chain 1	protein-coding
unique_peak1-2404-13-3-1.77847203063777-2.58603100924543	chr15	98714329	98714978	+	0	NA	Intergenic	B3|SINE|B2	-2808	NM_026967	69159	Mm.259708	NM_026967	ENSMUSG00000023755	Rhebl1	1810036J22Rik	Ras homolog enriched in brain like 1	protein-coding
common_peak2-26864-24-36--0.416243462861233-0.518746288394493	chr2	155818472	155819238	+	0	NA	intron (NM_177217, intron 29 of 33)	intron (NM_177217, intron 29 of 33)	11308	NM_001145351	320095	Mm.442175	NM_001145351	ENSMUSG00000074646	6430550D23Rik	-	RIKEN cDNA 6430550D23 gene	protein-coding
unique_peak1-5341-11-2-1.92373108353046-2.32232533660526	chr5	90885255	90885888	+	0	NA	Intergenic	Intergenic	-4344	NM_009654	11657	Mm.16773	NM_009654	ENSMUSG00000029368	Alb	Alb-1|Alb1	albumin	protein-coding
common_peak1-12583-171-258-0.151668880695564-0.65914532458293	chr18	14681824	14683632	+	0	NA	Intergenic	ORR1D2-int|LTR|MaLR	158695	NM_001161369	268996	Mm.31761	NM_009280	ENSMUSG00000037013	Ss18	D130059H17|Ssxt|Syt	synovial sarcoma translocation, Chromosome 18	protein-coding
unique_peak1-1532-10-3-1.35641534500877-1.75805390616669	chr13	16633525	16634087	+	0	NA	Intergenic	Intergenic	527498	NM_008380	16323	Mm.8042	NM_008380	ENSMUSG00000041324	Inhba	-	inhibin beta-A	protein-coding
common_peak1-12041-7-5-0.214128329577033-1.01466476204226	chr17	21450439	21450986	+	0	NA	promoter-TSS (NM_134200)	promoter-TSS (NM_134200)	-269	NM_134200	171234	Mm.405416	NM_134200	ENSMUSG00000058030	Vmn1r237	V1rf3|Vfrf3	vomeronasal 1 receptor 237	protein-coding
common_peak1-16068-30-26-0.414787907328405-0.652802052802684	chr5	52741489	52742289	+	0	NA	Intergenic	Intergenic	-13154	NM_011435	20657	Mm.2407	NM_011435		Sod3	AI314465|EC-SOD	superoxide dismutase 3, extracellular	protein-coding
common_peak1-17741-38-38-0.286050440436282-0.554098881286537	chr7	80946948	80948106	+	0	NA	Intergenic	Intergenic	13862	NR_077222	100579147	Mm.109205	NR_077222	ENSMUSG00000074067	Gm10619	4932443D20|ENSMUSG00000074067	predicted gene 10619	ncRNA
unique_peak1-6898-10-4-1.03448725012141-1.5150158574804	chr8	95202553	95203163	+	0	NA	intron (NM_001301137, intron 5 of 5)	intron (NM_001301137, intron 5 of 5)	4670	NM_001301137	64379	Mm.137247	NM_022428		Irx6	-	Iroquois related homeobox 6 (Drosophila)	protein-coding
unique_peak2-38761-3-7--1.41398308995928-1.23214870625617	chr7	121045198	121045549	+	0	NA	intron (NM_145584, intron 5 of 15)	intron (NM_145584, intron 5 of 15)	135861	NM_145584	233744	Mm.334160	NM_145584	ENSMUSG00000038156	Spon1	AI666765|AW455831|BC020531|D330035F22Rik|FSP	spondin 1, (f-spondin) extracellular matrix protein	protein-coding
unique_peak2-39597-0-7--3.84013093047421-1.80617997398389	chr9	77672801	77673300	+	0	NA	Intergenic	Lx7|LINE|L1	70708	NM_010295	14629	Mm.89888	NM_010295	ENSMUSG00000032350	Gclc	D9Wsu168e|GLCL-H|Ggcs-hs|Glclc	glutamate-cysteine ligase, catalytic subunit	protein-coding
unique_peak1-3229-6-0-2.5653981103803-2.10720996964787	chr18	60885438	60885963	+	0	NA	Intergenic	ORR1B2|LTR|MaLR	-12657	NM_008306	15531	Mm.181862	NM_008306	ENSMUSG00000054008	Ndst1	1200015G06Rik|Hsst|NDST-1|b2b2230Clo	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1	protein-coding
unique_peak1-1293-11-6-0.701338662194009-1.32595962126035	chr11	119856879	119857497	+	0	NA	intron (NM_130862, intron 7 of 13)	B1_Mus1|SINE|Alu	-18893	NR_037225	100526518		NR_037225		Mir3065	mmu-mir-3065	microRNA 3065	ncRNA
common_peak1-9929-31-59--0.681651924795395-1.40560368497292	chr12	102877805	102878631	+	0	NA	Intergenic	L1Md_F2|LINE|L1	71565	NM_028924	74413	Mm.275939	NM_028924	ENSMUSG00000021187	Tc2n	4933406D09Rik|Mtac2d1|Tac2-N	tandem C2 domains, nuclear	protein-coding
common_peak2-27177-31-63--0.774761329186877-1.78594796811655	chr3	35754031	35754850	+	0	NA	3' UTR (NM_029570, exon 30 of 30)	3' UTR (NM_029570, exon 30 of 30)	74556	NM_033623	114893	Mm.374810	NM_033623	ENSMUSG00000027708	Dcun1d1	Rp42|SCCRO|Tes3|pTes3	DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)	protein-coding
common_peak2-30544-16-10-0.658832023630764-0.699649909729472	chr7	73537222	73537780	+	0	NA	3' UTR (NM_053080, exon 13 of 13)	3' UTR (NM_053080, exon 13 of 13)	-4274	NM_146191	233328	Mm.33284	NM_146191	ENSMUSG00000015133	Lrrk1	AW319595|C230002E15Rik|D130026O16Rik|mKIAA1790	leucine-rich repeat kinase 1	protein-coding
common_peak1-18271-38-49--0.0724035304761941-0.303268666669768	chr8	34953573	34954932	+	0	NA	intron (NM_001042674, intron 4 of 7)	intron (NM_001042674, intron 4 of 7)	86083	NM_019733	19663	Mm.323997	NM_019733	ENSMUSG00000031586	Rbpms	2010300K22Rik|2700019M19Rik|AU017537|RBP-MS|hermes	RNA binding protein gene with multiple splicing	protein-coding
unique_peak2-36636-4-7--1.02346051385325-1.09384600808989	chr3	7512532	7512931	+	0	NA	intron (NM_173181, intron 1 of 8)	ORR1D1-int|LTR|MaLR	9305	NM_173181	67306	Mm.332366	NM_173181	ENSMUSG00000043542	Zc2hc1a	3110050N22Rik|AI790358|AU023959|Fam164a	zinc finger, C2HC-type containing 1A	protein-coding
common_peak2-27199-27-37--0.256381562548349-0.379775532323854	chr3	38277343	38278243	+	0	NA	Intergenic	Intergenic	105945	NM_001167883	99696	Mm.290937	NM_001033198	ENSMUSG00000044864	Ankrd50	AI662170|E430012K20Rik|mKIAA1223|mKIAA3019	ankyrin repeat domain 50	protein-coding
common_peak2-27629-21-35--0.600435736176077-0.748982406290541	chr3	105894566	105895460	+	0	NA	Intergenic	L1Md_A|LINE|L1	-21287	NM_023186	81600	Mm.46418	NM_023186	ENSMUSG00000062778	Chia1	2200003E03Rik|AMCase|Chia|YNL	chitinase, acidic 1	protein-coding
common_peak2-28149-36-47--0.105641414553402-0.310471923828336	chr4	103119045	103120346	+	0	NA	intron (NR_040673, intron 3 of 3)	intron (NR_040673, intron 3 of 3)	64590	NR_040673	622167	Mm.244115	NR_040673	ENSMUSG00000086136	Gm12718	OTTMUSG00000008109	predicted gene 12718	ncRNA
unique_peak2-36829-6-6--0.241956811677302-0.947717972411649	chr3	88513293	88513681	+	0	NA	intron (NM_028814, intron 11 of 13)	intron (NM_028814, intron 11 of 13)	-7289	NM_009069	19769	Mm.4009	NM_009069		Rit1	RIBB|ROC1|Rit	Ras-like without CAAX 1	protein-coding
unique_peak2-32657-9-10--0.269818212233077-1.05503135781948	chr1	133423778	133424381	+	0	NA	promoter-TSS (NM_175382)	promoter-TSS (NM_175382)	-141	NM_001081011	14270	Mm.276259	NM_019520	ENSMUSG00000026425	Srgap2	9930124L22Rik|AI448945|FBP2|Fnbp2|srGAP3	SLIT-ROBO Rho GTPase activating protein 2	protein-coding
unique_peak1-1623-12-4-1.32684789020028-2.04196296489515	chr13	43154284	43154908	+	0	NA	intron (NM_001005740, intron 4 of 12)	intron (NM_001005740, intron 4 of 12)	-63612	NM_001005748	218194	Mm.160124	NM_198419	ENSMUSG00000054728	Phactr1	9630030F18Rik|Rpel1	phosphatase and actin regulator 1	protein-coding
unique_peak1-1454-8-2-1.42025991722641-1.65811743852845	chr12	105003913	105004417	+	0	NA	exon (NM_009246, exon 3 of 5)	exon (NM_009246, exon 3 of 5)	7678	NM_009246	20703	Mm.439695	NM_009246	ENSMUSG00000071177	Serpina1d	AI118301|Dom4|PI4|Spi1-4	serine (or cysteine) peptidase inhibitor, clade A, member 1D	protein-coding
common_peak1-13912-16-8-0.948338640825749-1.02063122982878	chr2	80688721	80689480	+	0	NA	Intergenic	Intergenic	209679	NM_001190179	69482	Mm.29200	NM_027091		Nup35	2310006I24Rik|35kDa|5330402E05Rik|MP44|NO44	nucleoporin 35	protein-coding
common_peak1-10472-41-65--0.343245414509793-0.615335714844035	chr13	112463447	112464710	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-12308	NM_172593	218613	Mm.31012	NM_172593	ENSMUSG00000032727	Mier3	5730509D14|AU015422|D130064H19Rik	mesoderm induction early response 1, family member 3	protein-coding
common_peak2-26656-14-11-0.314253659636488-0.435191258261915	chr2	120981135	120981714	+	0	NA	3' UTR (NM_001290811, exon 10 of 10)	3' UTR (NM_001290811, exon 10 of 10)	13595	NM_029475	75894	Mm.384805	NM_029475	ENSMUSG00000027259	Adal	4930578F03Rik	adenosine deaminase-like	protein-coding
unique_peak1-811-24-6-1.98585498071011-3.65509904868667	chr11	4261137	4262067	+	0	NA	intron (NM_029458, intron 10 of 10)	Lx7|LINE|L1	79483	NM_029458	75828	Mm.159592	NM_029458	ENSMUSG00000020419	Hormad2	4930529M09Rik	HORMA domain containing 2	protein-coding
unique_peak2-37936-0-5--3.42509343119537-1.32905871926422	chr5	147074024	147074448	+	0	NA	intron (NM_153599, intron 2 of 12)	intron (NM_153599, intron 2 of 12)	30985	NM_153599	264064	Mm.260576	NM_153599	ENSMUSG00000029635	Cdk8	-	cyclin-dependent kinase 8	protein-coding
unique_peak2-36682-6-7--0.434601889619698-0.97990265578305	chr3	32403349	32403722	+	0	NA	Intergenic	Intergenic	-5937	NM_001161818	67778	Mm.285620	NM_144519		Zfp639	6230400O18Rik|ANC-2H01|ZASC1|Znf639	zinc finger protein 639	protein-coding
common_peak2-28280-30-26-0.414787907328405-0.652802052802684	chr4	129672031	129672832	+	0	NA	intron (NM_001290715, intron 1 of 28)	intron (NM_001290715, intron 1 of 28)	3133	NM_001290715	230775	Mm.262241	NM_173071	ENSMUSG00000028782	Bai2	-	brain-specific angiogenesis inhibitor 2	protein-coding
unique_peak1-3087-6-3-0.565398110380302-1.08602067057793	chr18	24193258	24193759	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-14236	NM_021559	59057	Mm.417427	NM_021559		Zfp191	3526401F17Rik|5033419P20Rik|AI480505|AI642085|AL024422|KOX17|ZF-12|Znf191|Znf24|Znp191	zinc finger protein 191	protein-coding
unique_peak2-35836-2-8--2.08737925770563-1.65811743852845	chr18	67947383	67947687	+	0	NA	intron (NM_001039088, intron 5 of 8)	intron (NM_001039088, intron 5 of 8)	12062	NR_045376	75286	Mm.307315	NR_045376		4930549G23Rik	-	RIKEN cDNA 4930549G23 gene	ncRNA
common_peak2-22321-43-43-0.323131566886405-0.62090566497527	chr13	21974311	21975124	+	0	NA	Intergenic	Intergenic	14201	NR_035500	100316716		NR_035500	miRBase:MI0009990	Mir1983	mmu-mir-1983	microRNA 1983	ncRNA
common_peak1-16137-20-16-0.400611943340854-0.507611860039817	chr5	73193367	73194483	+	0	NA	intron (NM_013689, intron 3 of 17)	intron (NM_013689, intron 3 of 17)	-49909	NM_001122754	22165	Mm.3264	NM_013698	ENSMUSG00000054892	Txk	A130089B16Rik|Btkl|PTK-RL-18|PTK4|Rlk	TXK tyrosine kinase	protein-coding
unique_peak1-88-12-3-1.64877598508764-2.36932189928148	chr1	43474013	43474635	+	0	NA	Intergenic	Intergenic	-28272	NM_010879	17974	Mm.389903	NM_010879	ENSMUSG00000066877	Nck2	4833426I10Rik|Grb4|NCKbeta|Nck-2	non-catalytic region of tyrosine kinase adaptor protein 2	protein-coding
common_peak2-30867-62-51-0.710311740660993-2.16650553432548	chr7	139363244	139365101	+	0	NA	Intergenic	Intergenic	-17748	NM_018867	55987	Mm.471654	NM_018867	ENSMUSG00000030862	Cpxm2	4632435C11Rik|CPX-2|Cpx2	carboxypeptidase X 2 (M14 family)	protein-coding
common_peak1-11753-93-85-0.684805108804171-3.06265717807747	chr16	37539238	37540955	+	0	NA	promoter-TSS (NM_028812)	promoter-TSS (NM_028812)	116	NM_001042499	67657	Mm.28158	NM_026297	ENSMUSG00000022827	Rabl3	4930553C05Rik|AA958834	RAB, member RAS oncogene family-like 3	protein-coding
unique_peak1-2136-14-2-2.31425365963649-3.28500101358144	chr15	55333172	55333800	+	0	NA	intron (NM_181277, intron 45 of 47)	intron (NM_181277, intron 45 of 47)	55381	NM_026759	68537	Mm.236795	NM_026759		Mrpl13	1110002D09Rik	mitochondrial ribosomal protein L13	protein-coding
unique_peak2-37269-5-12--1.40482005414695-1.62698961692433	chr4	114405830	114406455	+	0	NA	Intergenic	Intergenic	-88183	NR_033617	433746	Mm.388908	NR_033617	ENSMUSG00000055198	Gm12830	OTTMUSG00000008584	predicted gene 12830	ncRNA
unique_peak2-35272-5-6--0.511735258063458-0.947717972411649	chr17	3396630	3397081	+	0	NA	promoter-TSS (NM_011878)	promoter-TSS (NM_011878)	-352	NM_011878	24001	Mm.137134	NM_011878	ENSMUSG00000023800	Tiam2	3000002F19Rik|STEF|mKIAA2016	T cell lymphoma invasion and metastasis 2	protein-coding
unique_peak2-37909-5-7--0.704380336005853-1.01466476204226	chr5	143272017	143272535	+	0	NA	intron (NM_001122730, intron 16 of 18)	ORR1E|LTR|MaLR	-4657	NR_110503	102631757	Mm.373036	NR_110502		LOC102631757	-	uncharacterized LOC102631757	ncRNA
common_peak2-23159-38-44-0.0795995629688555-0.338806640379593	chr14	121182427	121183398	+	0	NA	Intergenic	L1Md_A|LINE|L1	-127504	NM_023579	70572	Mm.221452	NM_023579	ENSMUSG00000030662	Ipo5	1110011C18Rik|5730478E03Rik|AA409333|C76941|IMB3|Kpnb3|Ranbp5	importin 5	protein-coding
unique_peak2-34133-4-16--2.11092335510359-1.97518968347063	chr13	22043144	22043763	+	0	NA	intron (NM_183014, intron 5 of 5)	intron (NM_183014, intron 5 of 5)	6490	NM_183014	193452	Mm.187446	NM_183014	ENSMUSG00000006720	Zfp184	4930500C15Rik	zinc finger protein 184 (Kruppel-like)	protein-coding
unique_peak2-39958-4-17--2.19338551529556-2.18192634393779	chrX	140664664	140665532	+	0	NA	Intergenic	Intergenic	-67235	NR_030448	751551		NR_030448	miRBase:MI0004641	Mir680-2	Mirn680-2	microRNA 680-2	ncRNA
unique_peak1-3400-15-0-4.01216475055566-5.11750992628768	chr19	4490989	4491540	+	0	NA	Intergenic	Intergenic	7319	NM_027237	69861	Mm.282978	NM_027237	ENSMUSG00000042041	2010003K11Rik	-	RIKEN cDNA 2010003K11 gene	protein-coding
unique_peak1-3334-7-1-1.79909083029819-1.80617997398389	chr18	84905229	84905753	+	0	NA	intron (NM_173770, intron 3 of 4)	intron (NM_173770, intron 3 of 4)	15857	NM_173770	240479	Mm.472378	NM_173770	ENSMUSG00000047992	Fam69c	B230399E16Rik	family with sequence similarity 69, member C	protein-coding
common_peak2-32287-9-12--0.510826311736872-0.394412252720706	chrX	20961425	20962020	+	0	NA	Intergenic	Intergenic	23731	NR_045668	331392	Mm.23126	NM_198633	ENSMUSG00000051537	Gm5124	EG331392	nucleolar and coiled-body phosphoprotein 1 pseudogene	pseudo
common_peak2-22011-61-35-1.21282432830703-4.66635584136473	chr12	56532866	56534271	+	0	NA	Intergenic	Intergenic	33756	NM_011968	26443	Mm.30210	NM_011968	ENSMUSG00000021024	Psma6	IOTA	proteasome (prosome, macropain) subunit, alpha type 6	protein-coding
common_peak2-22647-56-75--0.012331688004342-0.301029995664007	chr13	93498402	93500003	+	0	NA	Intergenic	Intergenic	65571	NM_011582	21828	Mm.20865	NM_011582	ENSMUSG00000021702	Thbs4	TSP4	thrombospondin 4	protein-coding
unique_peak2-39670-5-11--1.28934283672701-1.477227296591	chr9	108049175	108049730	+	0	NA	intron (NM_007567, intron 1 of 11)	intron (NM_007567, intron 1 of 11)	43262	NM_007567	12217	Mm.20425	NM_007567	ENSMUSG00000032589	Bsn	-	bassoon	protein-coding
common_peak1-17509-10-12--0.344024373132323-0.340565874754526	chr7	27195738	27196228	+	0	NA	Intergenic	ETnERV-int|LTR|ERVK	-16721	NM_001042612	330490	Mm.212174	NM_194062	ENSMUSG00000040614	Nlrp9c	AA636537|BB062542|Nalp-zeta|Nalp9c	NLR family, pyrin domain containing 9C	protein-coding
common_peak1-10787-88-106-0.273945422769386-0.790625689510307	chr14	75844177	75846331	+	0	NA	Intergenic	Intergenic	-10535	NM_001128093	380918	Mm.484360	NM_001128093	ENSMUSG00000091722	Siah3	Gm912	seven in absentia homolog 3 (Drosophila)	protein-coding
common_peak1-18804-27-56--0.841344063269506-1.7405232834637	chr9	72662450	72663341	+	0	NA	intron (NM_175485, intron 2 of 19)	L1_Mus4|LINE|L1	7814	NM_175485	235472	Mm.31696	NM_175485	ENSMUSG00000036030	Prtg	A230098A12Rik|Igdcc5	protogenin homolog (Gallus gallus)	protein-coding
unique_peak2-36706-3-7--1.41398308995928-1.23214870625617	chr3	51197435	51197858	+	0	NA	intron (NM_026358, intron 1 of 3)	B3|SINE|B2	2823	NM_026358	67749	Mm.273339	NM_026358	ENSMUSG00000037161	Mgarp	4930583H14Rik|AI195347|CESP-1|HUMMR|Osap|Qsap	mitochondria localized glutamic acid rich protein	protein-coding
unique_peak2-37181-1-6--2.43441193227435-1.56314192529759	chr4	54944791	54945253	+	0	NA	Intergenic	Intergenic	-15795	NM_172867	242466	Mm.102904	NM_172867	ENSMUSG00000060206	Zfp462	6030417H05|9430078C22Rik|Gt4-2|Zfpip	zinc finger protein 462	protein-coding
common_peak1-14561-12-14--0.25811461052088-0.309074325783021	chr3	36481638	36482160	+	0	NA	intron (NM_027810, intron 13 of 18)	intron (NM_027810, intron 13 of 18)	-10981	NM_009828	12428	Mm.4189	NM_009828	ENSMUSG00000027715	Ccna2	AA408589|Ccn-1|Ccn1|Ccna|CycA2|Cyca	cyclin A2	protein-coding
common_peak1-12552-23-36--0.48768586111987-0.652802052802678	chr18	6516021	6516946	+	0	NA	promoter-TSS (NM_007935)	promoter-TSS (NM_007935)	-377	NM_007935	13831	Mm.312133	NM_007935	ENSMUSG00000024240	Epc1	2400007E14Rik|5730566F07Rik|A930032N02Rik	enhancer of polycomb homolog 1 (Drosophila)	protein-coding
unique_peak2-39638-11-21--0.950738034385684-0.991115276827166	chr9	103072344	103073255	+	0	NA	intron (NM_173781, intron 7 of 7)	intron (NM_173781, intron 7 of 7)	31596	NM_009275	20818	Mm.273053	NM_009275	ENSMUSG00000032553	Srprb	AA409543	signal recognition particle receptor, B subunit	protein-coding
unique_peak1-3095-9-0-3.18961340640422-3.01029995663981	chr18	25107220	25107765	+	0	NA	intron (NM_001289654, intron 5 of 24)	L1MEc|LINE|L1	216974	NM_001142697	66648	Mm.263189	NM_001004361	ENSMUSG00000024269	Tpgs2	5730437P09Rik|5730494M16Rik|AI666318|Pgs2	tubulin polyglutamylase complex subunit 2	protein-coding
common_peak2-21477-48-88--0.504806279731583-1.20397006444706	chr11	88067720	88069070	+	0	NA	Intergenic	Intergenic	-39150	NM_028859	74297	Mm.207320	NM_028859	ENSMUSG00000034031	1700106J16Rik	Ccdc182	RIKEN cDNA 1700106J16 gene	protein-coding
common_peak1-15017-46-66--0.16809324720897-0.363095533294587	chr3	116711402	116712736	+	0	NA	Intergenic	L1MC1|LINE|L1	-40199	NM_023245	114301	Mm.253736	NM_023245	ENSMUSG00000033377	Palmd	4631423C22Rik|PALML	palmdelphin	protein-coding
unique_peak2-37733-2-6--1.72480917832092-1.26211192963361	chr5	109900607	109901018	+	0	NA	Intergenic	Lx6|LINE|L1	51780	NM_001104628	384221	Mm.469879	NM_001104628	ENSMUSG00000091879	Vmn2r17	EG384221	vomeronasal 2, receptor 17	protein-coding
common_peak2-24106-25-19-0.539921810457743-0.756750750680359	chr16	32676605	32677193	+	0	NA	intron (NM_001110147, intron 10 of 13)	intron (NM_001110147, intron 10 of 13)	3659	NM_001289443	51789	Mm.251115	NM_016788	ENSMUSG00000022791	Tnk2	Ack|Ack-1|Ack1|Cdgip|Pyk1	tyrosine kinase, non-receptor, 2	protein-coding
common_peak2-21233-14-13-0.0918612383000403-0.332077462497413	chr11	66998440	66999019	+	0	NA	exon (NM_001039545, exon 20 of 40)	exon (NM_001039545, exon 20 of 40)	14200	NM_001039545	17882	Mm.422801	NM_144961	ENSMUSG00000033196	Myh2	MHC2A|MyHC-IIa|Myh2a|Myhs-f|Myhs-f1|Myhsf1	myosin, heavy polypeptide 2, skeletal muscle, adult	protein-coding
common_peak1-9860-15-18--0.235762762887929-0.326591483156968	chr12	80270516	80271307	+	0	NA	intron (NM_016800, intron 1 of 5)	intron (NM_016800, intron 1 of 5)	2534	NM_016800	53612	Mm.265929	NM_016800	ENSMUSG00000021124	Vti1b	AU015348|GES30|MVti1b|SNARE|Vti1-rp1	vesicle transport through interaction with t-SNAREs 1B	protein-coding
common_peak2-26096-24-27--0.0141450192898871-0.304978344874324	chr2	3118287	3119025	+	0	NA	intron (NM_001081161, intron 4 of 7)	intron (NM_001081161, intron 4 of 7)	-82828	NM_008708	18108	Mm.65021	NM_008708	ENSMUSG00000026643	Nmt2	A930001K02Rik|AI605445|AU044698|hNMT-2	N-myristoyltransferase 2	protein-coding
unique_peak1-2522-9-7-0.18961340640422-1.05908390183068	chr16	20413172	20413712	+	0	NA	intron (NM_176839, intron 2 of 6)	URR1B|DNA|MER1_type	13025	NM_013790	27416	Mm.20845	NM_013790	ENSMUSG00000022822	Abcc5	2900011L11Rik|AI132311|Abcc5a|Abcc5b|Mrp5	ATP-binding cassette, sub-family C (CFTR/MRP), member 5	protein-coding
unique_peak1-235-9-0-3.18961340640422-3.01029995663981	chr1	89573598	89573947	+	0	NA	intron (NR_122078, intron 6 of 27)	B1F|SINE|Alu	56885	NM_001110193	16331	Mm.15105	NM_010566	ENSMUSG00000026288	Inpp5d	SHIP|SHIP-1|SHIP1|SIP-145|p150Ship|s-SHIP	inositol polyphosphate-5-phosphatase D	protein-coding
common_peak1-8430-10-17--0.813509656433543-0.699649909729472	chr10	77259219	77259708	+	0	NA	intron (NM_001287074, intron 1 of 11)	intron (NM_001287074, intron 1 of 11)	2415	NM_001205034	100503388	Mm.482880	NM_001205034	ENSMUSG00000096380	Gm19668	-	predicted gene, 19668	protein-coding
unique_peak1-1854-11-5-0.923731083530457-1.477227296591	chr14	51932669	51933355	+	0	NA	Intergenic	Intergenic	32152	NR_045736	75377	Mm.402100	NR_045736		4930597G03Rik	-	RIKEN cDNA 4930597G03 gene	ncRNA
unique_peak2-37468-7-30--2.15510548008869-3.64499996644215	chr5	144670324	144671150	+	0	NA	promoter-TSS (NM_001172146)	promoter-TSS (NM_001172146)	-29	NM_146165	231872	Mm.200499	NM_146165	ENSMUSG00000029610	Aimp2	AA407136|AA407225|Aimp2(p38)|Jtv1	aminoacyl tRNA synthetase complex-interacting multifunctional protein 2	protein-coding
unique_peak2-34527-2-8--2.08737925770563-1.65811743852845	chr14	54516998	54517386	+	0	NA	Intergenic	Intergenic	231577	NM_001205242	100568452	Mm.213248	NM_001205242		A430107P09Rik	Va10	RIKEN cDNA A430107P09 gene	protein-coding
common_peak2-28061-18-18-0.0649916377847664-0.323898164595606	chr4	62208054	62208799	+	0	NA	intron (NM_177607, intron 14 of 14)	intron (NM_177607, intron 14 of 14)	-12455	NM_019492	50780	Mm.286753	NM_019492	ENSMUSG00000059810	Rgs3	4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S	regulator of G-protein signaling 3	protein-coding
common_peak2-21224-8-8--0.164702583494742-1.00793137938329	chr11	62648095	62648663	+	0	NA	intron (NM_053169, intron 3 of 5)	MIR3|SINE|MIR	-12246	NM_001033669	213980	Mm.482259	NM_001033669	ENSMUSG00000090173	Fbxw10	Fbw10|HREP|SM25H2|SM2SH2	F-box and WD-40 domain protein 10	protein-coding
unique_peak1-2569-6-1-1.5653981103803-1.56314192529759	chr16	25451849	25452266	+	0	NA	Intergenic	Intergenic	165154	NM_175165	71338	Mm.126851	NM_175165	ENSMUSG00000048399	Tprg	5430420C16Rik|Tprg1	transformation related protein 63 regulated	protein-coding
unique_peak2-37744-6-11--1.01956439034085-1.32595962126035	chr5	110652886	110653399	+	0	NA	TTS (NM_008146)	TTS (NM_008146)	-6881	NM_001253814	71782	Mm.288442	NM_027922	ENSMUSG00000029501	Ankle2	1110001J12Rik|AI661024|D5Ertd585e	ankyrin repeat and LEM domain containing 2	protein-coding
common_peak2-28920-15-6-1.20480982849805-1.32521814697968	chr5	92762848	92763219	+	0	NA	intron (NM_181728, intron 2 of 9)	B2_Mm1t|SINE|B2	2166	NM_181728	109979	Mm.263514	NM_181728	ENSMUSG00000034842	Art3	4930569O04Rik|ARTC3	ADP-ribosyltransferase 3	protein-coding
common_peak2-26419-22-32--0.397110014271049-0.488172498216822	chr2	60639909	60640808	+	0	NA	intron (NM_001141932, intron 2 of 14)	intron (NM_001141932, intron 2 of 14)	79137	NM_001141932	56878	Mm.259667	NM_020296	ENSMUSG00000026970	Rbms1	2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1	RNA binding motif, single stranded interacting protein 1	protein-coding
common_peak1-11283-20-21-0.0286431659538957-0.306080386793804	chr15	83155811	83156646	+	0	NA	intron (NM_025445, intron 7 of 15)	intron (NM_025445, intron 7 of 15)	24449	NM_025445	66251	Mm.258910	NM_025445	ENSMUSG00000054277	Arfgap3	0610009H19Rik|1810004P07Rik|1810035F16Rik|9130416J18Rik|Arfgap1	ADP-ribosylation factor GTPase activating protein 3	protein-coding
common_peak1-12050-30-27-0.362320487434269-0.581176766834141	chr17	21908916	21910233	+	0	NA	Intergenic	LTRIS3|LTR|ERV1	38883	NM_001164676	381067	Mm.482723	NM_001164676	ENSMUSG00000061544	Zfp229	-	zinc finger protein 229	protein-coding
unique_peak1-7056-21-4-2.24756117037887-3.74275476306371	chr9	3258724	3259036	+	0	NA	Intergenic	LSU-rRNA_Hsa|rRNA|rRNA	-59067	NR_027988	114673	Mm.422774	NM_053265		4930433N12Rik	-	RIKEN cDNA 4930433N12 gene	ncRNA
unique_peak2-33399-7-6--0.00826409175941478-0.97990265578305	chr11	53335618	53336072	+	0	NA	intron (NM_033144, intron 1 of 9)	intron (NM_033144, intron 1 of 9)	2607	NM_001252333	20362	Mm.274399	NM_033144	ENSMUSG00000018398	Sept8	AW046166|Sepl|mKIAA0202	septin 8	protein-coding
common_peak2-21563-13-17--0.391452970804544-0.364171515310935	chr11	97315808	97316230	+	0	NA	intron (NM_021493, intron 5 of 18)	intron (NM_021493, intron 5 of 18)	4545	NM_021493	58996	Mm.394118	NM_021493	ENSMUSG00000049807	Arhgap23	A330041B18Rik	Rho GTPase activating protein 23	protein-coding
unique_peak1-4229-10-3-1.35641534500877-1.75805390616669	chr2	122820629	122821072	+	0	NA	Intergenic	L1Md_T|LINE|L1	213115	NM_021507	59010	Mm.28986	NM_021507	ENSMUSG00000005803	Sqrdl	0610039J17Rik|4930557M22Rik	sulfide quinone reductase-like (yeast)	protein-coding
unique_peak2-39222-8-6-0.197867495889966-1.03789460276074	chr8	108885198	108885707	+	0	NA	Intergenic	Intergenic	-23564	NM_021491	58994	Mm.23298	NM_021491	ENSMUSG00000031906	Smpd3	4631433G07Rik|AI427456|AW537966|fro|nSMase2	sphingomyelin phosphodiesterase 3, neutral	protein-coding
common_peak2-20386-12-8-0.478850983645327-0.562038191119709	chr10	19191972	19192526	+	0	NA	Intergenic	Intergenic	115904	NM_053008	94222	Mm.156946	NM_053008	ENSMUSG00000045591	Olig3	Bhlhb7|bHLHe20	oligodendrocyte transcription factor 3	protein-coding
unique_peak1-1906-10-3-1.35641534500877-1.75805390616669	chr14	69506907	69507381	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-140202	NM_009285	20855	Mm.20911	NM_009285	ENSMUSG00000014813	Stc1	Stc	stanniocalcin 1	protein-coding
common_peak1-13869-119-120-0.61957468385545-3.41660931572619	chr2	70824445	70825973	+	0	NA	intron (NM_145524, intron 3 of 9)	intron (NM_145524, intron 3 of 9)	31222	NM_001110512	228019	Mm.490343	NM_145524	ENSMUSG00000041975	Mettl8	BC004636|Tip	methyltransferase like 8	protein-coding
common_peak2-19623-66-55-0.711128742368238-2.34521918826188	chr1	36938822	36940096	+	0	NA	intron (NM_018872, intron 2 of 40)	L1ME1|LINE|L1	56913	NM_018872	56030	Mm.186943	NM_018872	ENSMUSG00000026116	Tmem131	2610524E03Rik|CC28|D1Bwg0491e|Neg|RW1|YR-23|mKIAA0257	transmembrane protein 131	protein-coding
unique_peak1-917-8-1-2.00522241794757-2.05605744720049	chr11	49204504	49204914	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-39220	NM_147066	259069	Mm.377820	NM_147066	ENSMUSG00000046575	Olfr1389	MOR256-1	olfactory receptor 1389	protein-coding
common_peak2-30853-15-21--0.447266868081641-0.448200956659578	chr7	137410339	137410912	+	0	NA	promoter-TSS (NM_010207)	promoter-TSS (NM_010207)	-303	NM_201601	14183	Mm.16340	NM_010207	ENSMUSG00000030849	Fgfr2	AU043015|AW556123|Bek|Fgfr-2|Fgfr-7|Fgfr7|KGFR|KGFRTr|svs	fibroblast growth factor receptor 2	protein-coding
common_peak1-18567-15-8-0.842239749113344-0.891319708951327	chr8	105387533	105388162	+	0	NA	Intergenic	Lx6|LINE|L1	-78836	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
common_peak2-20961-30-44--0.322177686837802-0.475038482441584	chr11	19924166	19925092	+	0	NA	Intergenic	Intergenic	88325	NM_146243	66713	Mm.259045	NM_146243	ENSMUSG00000020152	Actr2	4921510D23Rik|AA409782|Arp2|D6Ertd746e	ARP2 actin-related protein 2	protein-coding
common_peak1-10434-11-27--1.29866133780599-1.81053432848961	chr13	101768108	101768791	+	0	NA	Intergenic	MLT1D|LTR|MaLR	-165067	NM_022885	69048	Mm.402215	NM_022885	ENSMUSG00000021629	Slc30a5	1810010K08Rik|AF233321|ZNT5|ZTL1|ZnT-5|Zntl1	solute carrier family 30 (zinc transporter), member 5	protein-coding
unique_peak2-32465-5-11--1.28934283672701-1.477227296591	chr1	16797032	16797539	+	0	NA	Intergenic	L1_Mus1|LINE|L1	118748	NM_016923	17087	Mm.116844	NM_016923	ENSMUSG00000025779	Ly96	ESOP-1|MD-2|MD2	lymphocyte antigen 96	protein-coding
common_peak2-32057-9-6-0.382258484346616-1.11707584880836	chr9	86701203	86701638	+	0	NA	intron (NM_001277982, intron 12 of 29)	intron (NM_001277982, intron 12 of 29)	64986	NM_178738	244954	Mm.257629	NM_178738	ENSMUSG00000033491	Prss35	6030424L22Rik|P3D9	protease, serine 35	protein-coding
common_peak1-7789-8-9--0.316705676939792-1.03275496310833	chr1	98084384	98084877	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-166295	NR_040467	73454	Mm.396229	NR_040467		1700063A18Rik	-	RIKEN cDNA 1700063A18 gene	ncRNA
unique_peak2-32877-4-7--1.02346051385325-1.09384600808989	chr10	9530478	9530913	+	0	NA	intron (NM_001081344, intron 14 of 25)	intron (NM_001081344, intron 14 of 25)	90143	NM_001081344	78808	Mm.331751	NM_030191	ENSMUSG00000019790	Stxbp5	0710001E20Rik|4930565N16Rik|AW742610|LGL3|mKIAA1006	syntaxin binding protein 5 (tomosyn)	protein-coding
unique_peak2-32864-5-7--0.704380336005853-1.01466476204226	chr10	128565243	128565693	+	0	NA	Intergenic	Lx5|LINE|L1	5354	NM_146863	258862	Mm.391449	NM_146863	ENSMUSG00000047868	Olfr770	MOR114-5	olfactory receptor 770	protein-coding
common_peak1-12319-10-13--0.450939577048835-0.386243247519795	chr17	47511430	47511926	+	0	NA	intron (NM_001146211, intron 3 of 6)	intron (NM_001146211, intron 3 of 6)	5532	NM_183086	64657	Mm.216250	NM_183086	ENSMUSG00000034729	Mrps10	1110038B19Rik|AW743084|Rpms10	mitochondrial ribosomal protein S10	protein-coding
common_peak1-14339-13-8-0.608547029195456-0.660903317613904	chr2	164550431	164551026	+	0	NA	Intergenic	RMER19A|LTR|ERVK	9923	NM_001040055	641368	Mm.422380	NM_001040055	ENSMUSG00000074593	Spint5	Gm14316|OTTMUSG00000016293	serine protease inhibitor, Kunitz type 5	protein-coding
unique_peak2-38363-8-6-0.197867495889966-1.03789460276074	chr7	4732618	4732933	+	0	NA	intron (NM_001290423, intron 1 of 4)	intron (NM_001290423, intron 1 of 4)	1684	NM_001290423	16156	Mm.35814	NM_008350	ENSMUSG00000004371	Il11	IL-11	interleukin 11	protein-coding
unique_peak2-39203-6-9--0.75652998450706-1.11707584880836	chr8	105758247	105758683	+	0	NA	Intergenic	Intergenic	112969	NR_036588	69794	Mm.396139	NR_036588		1600027J07Rik	-	RIKEN cDNA 1600027J07 gene	ncRNA
common_peak2-30055-20-28--0.369906210536379-0.457753417732779	chr6	128226092	128226980	+	0	NA	intron (NM_001080979, intron 1 of 10)	intron (NM_001080979, intron 1 of 10)	24295	NM_001080979	21679	Mm.14774	NM_011567	ENSMUSG00000030353	Tead4	ETFR-2|Etfr2|FR-19|Rtef1|TEAD-4|TEF-3|Tcf13r1|Tef3|Tefr|Tefr1|Tefr1a	TEA domain family member 4	protein-coding
common_peak1-11338-33-43--0.128094056111768-0.324581211600972	chr15	86185053	86186206	+	0	NA	intron (NM_145476, intron 9 of 12)	intron (NM_145476, intron 9 of 12)	140740	NM_145476	223754	Mm.28904	NM_145476	ENSMUSG00000051864	Tbc1d22a	BC023106|D15Ertd781e	TBC1 domain family, member 22a	protein-coding
common_peak1-15039-18-59--1.59397144438017-4.67072804133976	chr3	121722706	121723470	+	0	NA	Intergenic	Intergenic	-24290	NM_007378	11304	Mm.3918	NM_007378	ENSMUSG00000028125	Abca4	AW050280|Abc10|Abcr|D430003I15Rik|RmP	ATP-binding cassette, sub-family A (ABC1), member 4	protein-coding
common_peak1-9048-26-20-0.535581669379702-0.738267116931592	chr11	67051601	67052707	+	0	NA	intron (NM_010855, intron 2 of 39)	MIRc|SINE|MIR	840	NM_010855	17884	Mm.297382	NM_010855	ENSMUSG00000057003	Myh4	AI506973|MHC2B|MM|MYH-2B|Minimsc|Minmus|MyHC-IIb|Myhsf	myosin, heavy polypeptide 4, skeletal muscle	protein-coding
unique_peak1-1817-7-0-2.79909083029819-2.40823996531185	chr14	31419130	31419583	+	0	NA	intron (NM_011103, intron 6 of 17)	B1_Mus1|SINE|Alu	20038	NM_011103	18753	Mm.2314	NM_011103	ENSMUSG00000021948	Prkcd	AI385711|D14Ertd420e|PKC[d]|PKCdelta|Pkcd	protein kinase C, delta	protein-coding
unique_peak2-39164-5-11--1.28934283672701-1.477227296591	chr8	94178460	94178968	+	0	NA	intron (NM_011936, intron 8 of 8)	MLT1J|LTR|MaLR	146839	NM_001253822	16373	Mm.238044	NM_008393	ENSMUSG00000031734	Irx3	AI894186	Iroquois related homeobox 3	protein-coding
common_peak2-19942-19-33--0.684775514588653-0.884951936461256	chr1	130716604	130718181	+	0	NA	Intergenic	Intergenic	-228516	NM_009911	12767	Mm.1401	NM_009911	ENSMUSG00000045382	Cxcr4	CD184|Cmkar4|LESTR|PB-CKR|PBSF/SDF-1|Sdf1r|b2b220Clo	chemokine (C-X-C motif) receptor 4	protein-coding
unique_peak1-5522-10-0-3.35641534500877-3.31132995230379	chr5	139033613	139034281	+	0	NA	Intergenic	Lx2B|LINE|L1	27024	NM_013844	24135	Mm.27575	NM_013844		Zfp68	KRAB3|KRAZ2|Zfp70|mszf22|mszf49	zinc finger protein 68	protein-coding
unique_peak2-32604-7-15--1.20090916970181-0.947446088118041	chr1	92641492	92642227	+	0	NA	Intergenic	MER21B|LTR|ERV1	98689	NM_001243009	12835	Mm.7562	NM_009935	ENSMUSG00000048126	Col6a3	AI507288|Col6a-3	collagen, type VI, alpha 3	protein-coding
common_peak1-9592-37-42-0.0997283167837208-0.340524918943711	chr11	119299272	119300352	+	0	NA	Intergenic	MTD|LTR|MaLR	48026	NR_035453	100316690		NR_035453	miRBase:MI0009921	Mir1932	mmu-mir-1932	microRNA 1932	ncRNA
unique_peak2-33136-10-12--0.344024373132323-0.340565874754526	chr10	82240738	82241310	+	0	NA	Intergenic	LTR33|LTR|ERVL	-14138	NM_010914	18045	Mm.245998	NM_010914	ENSMUSG00000020248	Nfyb	AA985999|Cbf-A	nuclear transcription factor-Y beta	protein-coding
common_peak2-29742-13-20--0.613845392140992-0.532159081577619	chr6	86365700	86366432	+	0	NA	intron (NM_001164078, intron 2 of 11)	B1_Mur4|SINE|Alu	11853	NM_001164078	21841	Mm.333219	NM_011585	ENSMUSG00000071337	Tia1	2310050N03Rik|AI256674|TIA-1|mTIA-1	cytotoxic granule-associated RNA binding protein 1	protein-coding
common_peak2-27204-10-17--0.813509656433543-0.699649909729472	chr3	40799377	40800043	+	0	NA	Intergenic	Intergenic	45157	NM_001040399	214048	Mm.46782	NM_027663	ENSMUSG00000037814	Larp1b	1700108L22Rik|4933421B21Rik|AA690246|Larp2	La ribonucleoprotein domain family, member 1B	protein-coding
common_peak1-16349-75-102-0.0525664645600665-0.327007024258744	chr5	121190554	121192141	+	0	NA	intron (NM_145227, intron 4 of 10)	B1_Mur1|SINE|Alu	8510	NM_145227	246728	Mm.260926	NM_145227	ENSMUSG00000032690	Oas2	Oasl11	2'-5' oligoadenylate synthetase 2	protein-coding
common_peak2-31588-10-7-0.356415345008769-1.12966497611638	chr8	120535953	120536373	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-210334	NM_026758	68533	Mm.181836	NM_026758	ENSMUSG00000031843	Mphosph6	1110001M01Rik|AA536809|C86426	M phase phosphoprotein 6	protein-coding
unique_peak1-2210-9-8-0.0196884049619079-1.03275496310833	chr15	72651085	72651579	+	0	NA	intron (NM_001164641, intron 17 of 17)	intron (NM_001164641, intron 17 of 17)	-10578	NR_002864	353342	Mm.440245	NR_002864		Peg13	-	paternally expressed 13	ncRNA
unique_peak1-738-23-0-4.72176750450908-NA	chr10	105238304	105238549	+	0	NA	intron (NM_207522, intron 5 of 11)	RMER21B|LTR|ERV1	40010	NM_207522	216292	Mm.250875	NM_207522	ENSMUSG00000036009	Mettl25	-	methyltransferase like 25	protein-coding
common_peak1-17128-72-35-1.49865881143001-7.73102077317688	chr6	115503167	115505598	+	0	NA	intron (NM_199033, intron 4 of 11)	intron (NM_199033, intron 4 of 11)	9660	NM_199033	381802	Mm.291208	NM_199033	ENSMUSG00000042389	Tsen2	AU067695	tRNA splicing endonuclease 2 homolog (S. cerevisiae)	protein-coding
unique_peak2-37243-2-8--2.08737925770563-1.65811743852845	chr4	94137016	94137467	+	0	NA	Intergenic	Intergenic	86246	NM_026368	67770	Mm.35170	NM_026368	ENSMUSG00000028578	Caap1	5830433M19Rik|AI536248|CAAP	caspase activity and apoptosis inhibitor 1	protein-coding
unique_peak2-34306-5-8--0.874305337448166-1.10484139239135	chr13	90513759	90514162	+	0	NA	Intergenic	Intergenic	284688	NM_025335	66074	Mm.241387	NM_025335		Tmem167	0610041E09Rik|5730424F14Rik|AU041184|AW537806|ENSMUSG00000060669|Gm10085|Tmem167a	transmembrane protein 167	protein-coding
unique_peak2-34601-6-9--0.75652998450706-1.11707584880836	chr14	70618252	70618722	+	0	NA	intron (NM_008915, intron 13 of 13)	B2_Mm2|SINE|B2	-11009	NM_011366	20410	Mm.5068	NM_011366	ENSMUSG00000022091	Sorbs3	SCAM-1|SH3P3|Sh3d4|vinexin-g	sorbin and SH3 domain containing 3	protein-coding
unique_peak1-4381-8-4-0.683294323060208-1.21878474469819	chr2	163071589	163072132	+	0	NA	intron (NM_001098799, intron 1 of 8)	intron (NM_001098799, intron 1 of 8)	20670	NM_001098799	269389	Mm.207709	NM_001098799	ENSMUSG00000074607	Tox2	AI851523|AV026525|BI987407|Gcx1|RxHMG1	TOX high mobility group box family member 2	protein-coding
unique_peak1-280-12-6-0.841421063030034-1.58711810488664	chr1	106408132	106408756	+	0	NA	Intergenic	L1_Mm|LINE|L1	-256952	NM_011800	23836	Mm.103640	NM_011800	ENSMUSG00000050840	Cdh20	Cdh7	cadherin 20	protein-coding
common_peak2-24466-111-193--0.182219050776959-0.589940284655538	chr17	24168676	24169963	+	0	NA	Intergenic	Intergenic	-5891	NM_175440	213171	Mm.133083	NM_175440	ENSMUSG00000050762	Prss27	CAPH2|Mpn|marapsin	protease, serine 27	protein-coding
unique_peak2-38699-5-7--0.704380336005853-1.01466476204226	chr7	105554526	105554958	+	0	NA	Intergenic	Intergenic	-34184	NM_001130693	14918	Mm.389928	NM_001034890	ENSMUSG00000074003	Gucy2d	-	guanylate cyclase 2d	protein-coding
common_peak2-28992-13-14--0.12841856497075-0.301029995663977	chr5	107987223	107987713	+	0	NA	intron (NM_133248, intron 14 of 18)	intron (NM_133248, intron 14 of 18)	23738	NM_175241	76421	Mm.67037	NM_175241	ENSMUSG00000089798	1700028K03Rik	-	RIKEN cDNA 1700028K03 gene	protein-coding
common_peak2-23839-46-41-0.505678520470041-1.08181395420695	chr15	101951827	101953067	+	0	NA	intron (NM_001033277, intron 6 of 10)	intron (NM_001033277, intron 6 of 10)	14199	NM_001033277	223918	Mm.385009	NM_001033277	ENSMUSG00000036966	Spryd3	BC008150	SPRY domain containing 3	protein-coding
unique_peak2-33449-1-8--2.79698201165906-2.05605744720049	chr11	63761352	63761774	+	0	NA	Intergenic	Intergenic	-25777	NM_018805	54710	Mm.274426	NM_018805	ENSMUSG00000070407	Hs3st3b1	3-OST-3B|3OST3B1|3Ost3b|AU041882|AW536289|Hs3st3b|m3-OST-3B	heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1	protein-coding
unique_peak1-1341-9-1-2.18961340640422-2.31132995230379	chr12	13606090	13606444	+	0	NA	Intergenic	ORR1A3|LTR|MaLR	330334	NM_027706	71169	Mm.177520	NM_027706	ENSMUSG00000020576	Nbas	4933425L03Rik|Nag	neuroblastoma amplified sequence	protein-coding
common_peak2-20166-17-30--0.735899972181837-0.841847921495509	chr1	171113573	171114470	+	0	NA	Intergenic	Intergenic	347574	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
unique_peak2-37853-1-6--2.43441193227435-1.56314192529759	chr5	135945102	135945511	+	0	NA	intron (NM_146001, intron 1 of 30)	ZP3AR|Satellite|Satellite	-74890	NM_148932	107939	Mm.28399	NM_148932	ENSMUSG00000053293	Pom121	2610027A18Rik|C80273|mKIAA0618	nuclear pore membrane protein 121	protein-coding
unique_peak1-3237-25-5-2.27688740462395-4.37015862955249	chr18	62033052	62033923	+	0	NA	intron (NM_001164491, intron 2 of 23)	intron (NM_001164491, intron 2 of 23)	37991	NM_198649	319713	Mm.329478	NM_198649	ENSMUSG00000032735	Ablim3	AW990719|D930036B08Rik	actin binding LIM protein family, member 3	protein-coding
unique_peak2-35061-3-6--1.22133801201688-1.08602067057793	chr16	11475613	11475994	+	0	NA	intron (NM_001290148, intron 6 of 13)	intron (NM_001290148, intron 6 of 13)	70062	NM_001290148	74478	Mm.325831	NM_028964	ENSMUSG00000071669	Snx29	4933437K13Rik|ENSMUSG00000079738|Gm11170|Gm1737|Gm930|Rundc2a	sorting nexin 29	protein-coding
unique_peak2-36159-10-13--0.450939577048835-0.386243247519795	chr2	26091202	26092042	+	0	NA	intron (NM_153559, intron 1 of 12)	B3A|SINE|B2	1318	NM_153559	227638	Mm.116769	NM_153559	ENSMUSG00000036327	Qsox2	BC030934|Qscn6l1|SOXN	quiescin Q6 sulfhydryl oxidase 2	protein-coding
common_peak1-15776-12-9-0.326847890200276-0.459837087125828	chr4	154142327	154142823	+	0	NA	Intergenic	Intergenic	-87734	NM_172878	242800	Mm.72944	NM_172878	ENSMUSG00000046637	Ttc34	4932418L02|B230396O12Rik	tetratricopeptide repeat domain 34	protein-coding
unique_peak2-39878-4-6--0.830815435910851-0.989110657569874	chrX	74297102	74297504	+	0	NA	Intergenic	Intergenic	-449040	NM_001201395	74987	Mm.107996	NM_001201395	ENSMUSG00000079525	4930468A15Rik	-	RIKEN cDNA 4930468A15 gene	protein-coding
common_peak2-24675-18-24--0.330937038546373-0.380101753845076	chr17	37046051	37046672	+	0	NA	exon (NM_146077, exon 8 of 8)	exon (NM_146077, exon 8 of 8)	11286	NM_146077	224762	Mm.213417	NM_146077	ENSMUSG00000058063	Trim31	BC026666|HCG1|HCGI|RNF	tripartite motif-containing 31	protein-coding
unique_peak2-33702-12-14--0.25811461052088-0.309074325783021	chr11	108342570	108343310	+	0	NA	intron (NM_029606, intron 7 of 27)	L1M5|LINE|L1	56360	NM_029606	76380	Mm.344071	NM_029586	ENSMUSG00000020728	Cep112	1700001M19Rik|1700029K01Rik|8430407H02Rik|AV043680|AV207351|Ccdc46|Macoco	centrosomal protein 112	protein-coding
unique_peak1-1288-12-1-2.64877598508764-3.36932189928148	chr11	118433413	118433933	+	0	NA	intron (NM_001285436, intron 3 of 13)	intron (NM_001285436, intron 3 of 13)	95399	NM_172573	217364	Mm.473963	NM_172573	ENSMUSG00000033857	Engase	C130099A03|D230014K01Rik	endo-beta-N-acetylglucosaminidase	protein-coding
common_peak2-25916-23-9-1.39983940962172-2.17218792383888	chr19	46356333	46356867	+	0	NA	intron (NM_178930, intron 33 of 39)	intron (NM_178930, intron 33 of 39)	-22627	NM_001177369	18034	Mm.102365	NM_019408	ENSMUSG00000025225	Nfkb2	NF-kappaB2|lyt|p49|p49/p100|p50B|p52	nuclear factor of kappa light polypeptide gene enhancer in B cells 2, p49/p100	protein-coding
common_peak2-21720-17-23--0.366666162516118-0.383878263347744	chr11	110357135	110357722	+	0	NA	intron (NM_011943, intron 7 of 11)	intron (NM_011943, intron 7 of 11)	96992	NM_011943	26399	Mm.14487	NM_011943	ENSMUSG00000020623	Map2k6	MEK6|MKK6|Prkmk6|SAPKK3	mitogen-activated protein kinase kinase 6	protein-coding
common_peak2-19776-55-57-0.34663887602513-0.781433730164713	chr1	82808861	82810703	+	0	NA	Intergenic	CT-rich|Low_complexity|Low_complexity	-26276	NM_010472	15463	Mm.392569	NM_010472	ENSMUSG00000026159	Agfg1	AU045498|C130049H11Rik|C85612|D730048C23Rik|Hrb|RAB|Rip	ArfGAP with FG repeats 1	protein-coding
common_peak1-17164-38-33-0.483989818048191-0.907712525274296	chr6	119902068	119903439	+	0	NA	exon (NM_198703, exon 12 of 28)	exon (NM_198703, exon 12 of 28)	50037	NM_001166381	19365	Mm.149	NM_011236	ENSMUSG00000030166	Rad52	Rad52yh	RAD52 homolog (S. cerevisiae)	protein-coding
common_peak2-26363-13-9-0.456543935750406-0.53895475198017	chr2	38545657	38546292	+	0	NA	Intergenic	Intergenic	24088	NM_139051	26423	Mm.31387	NM_139051	ENSMUSG00000026751	Nr5a1	Ad4BP|ELP|ELP-3|Ftz-F1|Ftzf1|SF-1|SF1	nuclear receptor subfamily 5, group A, member 1	protein-coding
unique_peak1-5521-9-3-1.18961340640422-1.57096726280955	chr5	138845827	138846321	+	0	NA	Intergenic	MYSERV16_I-int|LTR|ERVK	-36630	NM_028130	72154	Mm.20263	NM_028130	ENSMUSG00000036898	Zfp157	2610020C11Rik|A630094N24Rik|AI327407|mszf12|mszf23-1	zinc finger protein 157	protein-coding
unique_peak2-35792-7-10--0.660340788339108-1.12966497611638	chr18	56708854	56709348	+	0	NA	intron (NM_138600, intron 5 of 17)	B2_Mm2|SINE|B2	11308	NR_106160	102465790		NR_106160	miRBase:MI0025040	Mir1258	mmu-mir-1258	microRNA mir-1258	ncRNA
common_peak2-30641-10-23--1.22854715571239-1.44380006500971	chr7	98330357	98330913	+	0	NA	intron (NM_011807, intron 1 of 22)	L1Md_F2|LINE|L1	91339	NM_011807	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
common_peak2-20250-7-5-0.214128329577033-1.01466476204226	chr1	184274452	184274693	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	-2835	NM_175127	67948	Mm.30737	NM_175127	ENSMUSG00000047539	Fbxo28	4833428J17Rik|5730505P19Rik|D1Ertd578e|Fbx28|mKIAA0483	F-box protein 28	protein-coding
common_peak1-14835-54-78--0.130694986547369-0.353159239817814	chr3	93520160	93521558	+	0	NA	Intergenic	RLTR45-int|LTR|ERVK	-40654	NM_148949	207213	Mm.425165	NM_148949	ENSMUSG00000094084	Tdpoz1	2cpoz56|Mapp2|Spopl1	TD and POZ domain containing 1	protein-coding
common_peak2-25656-6-8--0.60452689106201-1.03789460276074	chr19	10281537	10281959	+	0	NA	exon (NM_026919, exon 3 of 4)	exon (NM_026919, exon 3 of 4)	1225	NM_001163431	69038	Mm.375100	NM_026919	ENSMUSG00000036372	Tmem258	1810006K21Rik	transmembrane protein 258	protein-coding
common_peak2-25970-26-36--0.281554273470488-0.419637632935626	chr19	53390834	53391751	+	0	NA	intron (NM_001008542, intron 1 of 5)	intron (NM_001008542, intron 1 of 5)	6296	NM_001008542	17859	Mm.2154	NM_010847	ENSMUSG00000025025	Mxi1	ENSMUSG00000067085|Gm10197|Mad2|bHLHc11	Max interacting protein 1	protein-coding
common_peak1-15603-46-55-0.0906410211911979-0.348250801558495	chr4	132210998	132212308	+	0	NA	intron (NM_210071, intron 1 of 16)	intron (NM_210071, intron 1 of 16)	16692	NM_010166	14050	Mm.227733	NM_010166	ENSMUSG00000028886	Eya3	AI844637	eyes absent 3 homolog (Drosophila)	protein-coding
common_peak1-15897-10-8-0.186490343566457-1.078512453669	chr5	17557699	17558262	+	0	NA	Intergenic	Intergenic	89592	NM_001081143	242851	Mm.332230	NM_001081143	ENSMUSG00000028777	Gnat3	Ggust|Gtn	guanine nucleotide binding protein, alpha transducing 3	protein-coding
common_peak1-19283-15-28--0.845816244571916-1.02077663956385	chr9	119339662	119340121	+	0	NA	intron (NM_007397, intron 6 of 9)	intron (NM_007397, intron 6 of 9)	-14150	NM_001172136	208194	Mm.101578	NM_172456	ENSMUSG00000042787	Exog	AW557704|ENGL-B|ENGL-a|Endogl1|Endogl2|Engl|Engla|Englb	endo/exonuclease (5'-3'), endonuclease G-like	protein-coding
common_peak1-18378-12-2-2.06381348436648-2.79529063155376	chr8	70674110	70674739	+	0	NA	Intergenic	RMER13A|LTR|ERVK	-126003	NM_028182	72281	Mm.40974	NM_028182	ENSMUSG00000053886	Sh2d4a	2210402M20Rik|SH2A	SH2 domain containing 4A	protein-coding
common_peak2-26505-17-40--1.13925566641305-1.9602491241746	chr2	85050406	85051341	+	0	NA	Intergenic	Intergenic	-14017	NM_001033346	241528	Mm.291095	NM_001033346	ENSMUSG00000075224	Lrrc55	A330097E02Rik|Gm351	leucine rich repeat containing 55	protein-coding
common_peak2-28126-44-39-0.499964739681173-1.03825765497309	chr4	94602342	94603537	+	0	NA	Intergenic	Intergenic	-7405	NM_001290623	67753	Mm.25097	NM_027089	ENSMUSG00000028575	Eqtn	1700028B15Rik|4930579C15Rik|Afaf|C81058|Eqtl|Eqts	equatorin, sperm acrosome associated	protein-coding
common_peak1-15810-28-13-1.24560419776386-2.25377313481387	chr5	36076645	36077867	+	0	NA	Intergenic	Intergenic	-5331	NM_194344	231147	Mm.290429	NM_194344	ENSMUSG00000036553	Sh3tc1	4631428G15|BC024909	SH3 domain and tetratricopeptide repeats 1	protein-coding
common_peak2-29904-75-108--0.0291173330336409-0.30203998647286	chr6	113689524	113691603	+	0	NA	intron (NM_024206, intron 1 of 8)	intron (NM_024206, intron 1 of 8)	112	NM_024206	110379	Mm.29296	NM_024206	ENSMUSG00000030298	Sec13	1110003H02Rik|Sec13l1|Sec13r	SEC13 homolog (S. cerevisiae)	protein-coding
unique_peak1-2091-10-3-1.35641534500877-1.75805390616669	chr15	36958758	36959425	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-21934	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
common_peak1-16103-33-30-0.377141252138654-0.612304185853042	chr5	65107410	65108276	+	0	NA	Intergenic	Intergenic	-86919	NM_008453	16599	Mm.392759	NM_008453	ENSMUSG00000029178	Klf3	9930027G08Rik|AL024007|Bklf|Tef-2	Kruppel-like factor 3 (basic)	protein-coding
unique_peak1-3093-13-1-2.77847203063777-3.64038867156802	chr18	24999216	24999746	+	0	NA	intron (NM_001289654, intron 3 of 24)	ORR1B1|LTR|MaLR	132357	NM_001289655	225288	Mm.329322	NM_175276	ENSMUSG00000034295	Fhod3	A930009H06Rik|FHOS2|mKIAA1695	formin homology 2 domain containing 3	protein-coding
common_peak1-17198-49-39-0.684355728137821-1.63192341342353	chr6	124919544	124921276	+	0	NA	Intergenic	ID_B1|SINE|B4	-4863	NM_001164089	26894	Mm.244536	NM_012003	ENSMUSG00000030127	Cops7a	D6Ertd35e	COP9 (constitutive photomorphogenic) homolog, subunit 7a (Arabidopsis thaliana)	protein-coding
unique_peak1-2243-12-2-2.06381348436648-2.79529063155376	chr15	76724516	76725054	+	0	NA	Intergenic	ERVL-E-int|LTR|ERVL	-5586	NM_025536	66398	Mm.291716	NM_025536	ENSMUSG00000055041	Commd5	2310065H03Rik|AI854466|D15Ertd81e|Hcarg	COMM domain containing 5	protein-coding
common_peak2-29534-30-30-0.215479099104998-0.419637632935632	chr6	38533102	38533829	+	0	NA	intron (NM_001170848, intron 2 of 8)	intron (NM_001170848, intron 2 of 8)	32021	NM_001170848	192196	Mm.276133	NM_138680	ENSMUSG00000029823	Luc7l2	4930471C18Rik|AA522013|AU015269|CGI59|Cgi74	LUC7-like 2 (S. cerevisiae)	protein-coding
unique_peak1-7094-27-5-2.40658345017408-5.07532537266956	chr9	40323277	40324483	+	0	NA	Intergenic	Intergenic	-60531	NM_172768	235283	Mm.138434	NM_172768	ENSMUSG00000040111	Gramd1b	3222402H23|A930008A22Rik|AI593249|mKIAA1201	GRAM domain containing 1B	protein-coding
unique_peak1-4571-8-1-2.00522241794757-2.05605744720049	chr3	52845357	52846008	+	0	NA	5' UTR (NM_175386, exon 1 of 4)	5' UTR (NM_175386, exon 1 of 4)	213	NM_175386	108927	Mm.118617	NM_175386	ENSMUSG00000048332	Lhfp	2810489O06Rik|AI194968	lipoma HMGIC fusion partner	protein-coding
unique_peak2-37137-7-17--1.37083417114412-1.23399803405144	chr4	21727728	21728281	+	0	NA	intron (NM_152825, intron 8 of 17)	intron (NM_152825, intron 8 of 17)	24587	NM_152825	77593	Mm.154306	NM_152825	ENSMUSG00000040455	Usp45	3110003C05Rik|4930550B20Rik|AI843191|Gcap7	ubiquitin specific petidase 45	protein-coding
common_peak2-21743-13-19--0.543456064249594-0.466170754204149	chr11	115612547	115613224	+	0	NA	Intergenic	Intergenic	-13862	NM_028014	71947	Mm.23168	NM_028014	ENSMUSG00000020747	2310067B10Rik	Kiaa0195|mKIAA0195	RIKEN cDNA 2310067B10 gene	protein-coding
unique_peak1-2948-9-0-3.18961340640422-3.01029995663981	chr17	67126344	67126842	+	0	NA	intron (NM_008984, intron 17 of 30)	intron (NM_008984, intron 17 of 30)	-182631	NM_028998	74556	Mm.218634	NM_028998	ENSMUSG00000024105	Themis3	9130404H23Rik	thymocyte selection associated family member 3	protein-coding
common_peak1-16886-73-134--0.384420590625609-1.18405808914982	chr6	71493476	71495039	+	0	NA	intron (NM_025783, intron 1 of 5)	CpG	409	NM_025783	66700	Mm.181278	NM_025783	ENSMUSG00000053119	Chmp3	25.1|4921505F14Rik|9130011K15Rik|CGI-49|D6Ertd286e|NEDF|Vps24	charged multivesicular body protein 3	protein-coding
unique_peak1-1367-9-1-2.18961340640422-2.31132995230379	chr12	33220286	33220784	+	0	NA	Intergenic	L1Md_A|LINE|L1	156881	NM_001162903	72123	Mm.341352	NM_028111	ENSMUSG00000090946	Ccdc71l	2010109K11Rik|AV375874	coiled-coil domain containing 71 like	protein-coding
common_peak1-12800-52-43-0.648828371628402-1.62370182176242	chr18	65070755	65072558	+	0	NA	intron (NM_001114386, intron 1 of 30)	intron (NM_001114386, intron 1 of 30)	24246	NM_001114386	83814	Mm.98668	NM_031881	ENSMUSG00000024589	Nedd4l	1300012C07Rik|Nedd4-2|Nedd4b	neural precursor cell expressed, developmentally down-regulated gene 4-like	protein-coding
unique_peak2-38078-0-8--4.01005593191652-2.05605744720049	chr6	50454324	50454845	+	0	NA	Intergenic	Intergenic	-48415	NM_001163645	71720	Mm.44153	NM_027881	ENSMUSG00000029822	Osbpl3	1200014M06Rik|6720421I08Rik|A530055M08|ORP3|OSBP3	oxysterol binding protein-like 3	protein-coding
common_peak2-27358-41-61--0.253047605538215-0.456849196733789	chr3	81932396	81933184	+	0	NA	intron (NM_021896, intron 1 of 8)	intron (NM_021896, intron 1 of 8)	17009	NM_021896	60596	Mm.143831	NM_021896	ENSMUSG00000033910	Gucy1a3	1200016O07Rik|sGC-alpha1	guanylate cyclase 1, soluble, alpha 3	protein-coding
unique_peak1-480-15-5-1.4272022498345-1.61682445937017	chr1	177503471	177504178	+	0	NA	Intergenic	Intergenic	51942	NM_010209	14194	Mm.41502	NM_010209		Fh1	Fh|Fh-1	fumarate hydratase 1	protein-coding
common_peak2-27863-185-247-0.351229693573357-2.14195681573047	chr3	157533695	157535107	+	0	NA	Intergenic	Intergenic	53626	NM_145953	107869	Mm.28301	NM_145953	ENSMUSG00000028179	Cth	0610010I13Rik|AI314617|BC019483|CSE|Cys3	cystathionase (cystathionine gamma-lyase)	protein-coding
common_peak2-27274-9-5-0.604650905683064-1.21398586181642	chr3	57335136	57335505	+	0	NA	intron (NM_133784, intron 2 of 6)	intron (NM_133784, intron 2 of 6)	44478	NM_133784	97064	Mm.405029	NM_133784	ENSMUSG00000027803	Wwtr1	2310058J06Rik|2610021I22Rik|C78399|Taz	WW domain containing transcription regulator 1	protein-coding
common_peak1-12888-28-49--0.590897069953262-0.983321682013132	chr18	80206697	80207565	+	0	NA	Intergenic	RMER19B|LTR|ERVK	-36503	NM_053117	93737	Mm.24678	NM_053117	ENSMUSG00000056214	Pard6g	2410049N21Rik|Par6a	par-6 family cell polarity regulator gamma	protein-coding
common_peak2-28121-10-7-0.356415345008769-1.12966497611638	chr4	89125454	89125956	+	0	NA	Intergenic	AT_rich|Low_complexity|Low_complexity	-168764	NM_007670	12579	Mm.423094	NM_007670	ENSMUSG00000073802	Cdkn2b	AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b	cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)	protein-coding
unique_peak1-3665-9-2-1.60465090568306-1.87199725847353	chr19	40434642	40435136	+	0	NA	intron (NM_001034962, intron 10 of 22)	intron (NM_001034962, intron 10 of 22)	41911	NM_001034964	20411	Mm.210815	NM_009166		Sorbs1	2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296	sorbin and SH3 domain containing 1	protein-coding
common_peak1-15593-45-51-0.15991830720378-0.398713855155082	chr4	129810434	129812119	+	0	NA	intron (NM_001163027, intron 6 of 8)	intron (NM_001163027, intron 6 of 8)	4519	NM_001163027	230777	Mm.246595	NM_198959	ENSMUSG00000028778	Hcrtr1	Ox1r	hypocretin (orexin) receptor 1	protein-coding
unique_peak1-6479-22-6-1.8399291830298-3.01815507148775	chr7	112208356	112209400	+	0	NA	Intergenic	Intergenic	4116	NM_146358	258355	Mm.377452	NM_146358	ENSMUSG00000073914	Olfr677	MOR32-11	olfactory receptor 677	protein-coding
common_peak2-20504-25-14-0.954959309736587-1.46151065785802	chr10	59578022	59578713	+	0	NA	intron (NM_052994, intron 1 of 10)	intron (NM_052994, intron 1 of 10)	9362	NM_052994	94214	Mm.153429	NM_052994	ENSMUSG00000058297	Spock2	AA407235|Gcap26|mKIAA0275	sparc/osteonectin, cwcv and kazal-like domains proteoglycan 2	protein-coding
common_peak2-24111-11-12--0.191746133889479-0.310474156842889	chr16	32859409	32860205	+	0	NA	intron (NM_001200038, intron 1 of 19)	intron (NM_001200038, intron 1 of 19)	8645	NM_001200038	100502698	Mm.327319	NM_172615	ENSMUSG00000035629	1700021K19Rik	5330403K09|Kiaa0226|Rubicon|mKIAA0226	RIKEN cDNA 1700021K19 gene	protein-coding
unique_peak1-3689-7-0-2.79909083029819-2.40823996531185	chr19	42757257	42757708	+	0	NA	Intergenic	Intergenic	69783	NM_029011	74580	Mm.329858	NM_029011	ENSMUSG00000060224	Pyroxd2	3830409H07Rik|4833409A17Rik	pyridine nucleotide-disulphide oxidoreductase domain 2	protein-coding
unique_peak2-33933-2-5--1.50241675698448-1.08602067057793	chr12	71897903	71898292	+	0	NA	Intergenic	ID4|SINE|ID	-28404	NM_028127	319710	Mm.2962	NM_028127	ENSMUSG00000048285	Frmd6	2610019M19Rik|4930488L10Rik|AW212977	FERM domain containing 6	protein-coding
unique_peak1-192-11-5-0.923731083530457-1.477227296591	chr1	77538273	77538713	+	0	NA	Intergenic	Intergenic	-26830	NM_007936	13838	Mm.400747	NM_007936	ENSMUSG00000026235	Epha4	2900005C20Rik|AI385584|Cek8|Hek8|Sek|Sek1|Tyro1|rb	Eph receptor A4	protein-coding
common_peak1-11715-19-16-0.315224485411347-0.448200956659575	chr16	32640257	32641119	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-4041	NM_001110147	51789	Mm.251115	NM_016788	ENSMUSG00000022791	Tnk2	Ack|Ack-1|Ack1|Cdgip|Pyk1	tyrosine kinase, non-receptor, 2	protein-coding
unique_peak1-4964-9-6-0.382258484346616-1.11707584880836	chr4	103264618	103265120	+	0	NA	Intergenic	L1Md_T|LINE|L1	209764	NR_040673	622167	Mm.244115	NR_040673	ENSMUSG00000086136	Gm12718	OTTMUSG00000008109	predicted gene 12718	ncRNA
common_peak1-18933-25-25-0.161410187204014-0.36542888694933	chr9	45845765	45846910	+	0	NA	intron (NM_027498, intron 1 of 24)	intron (NM_027498, intron 1 of 24)	25434	NM_027498	70661	Mm.219459	NM_027498	ENSMUSG00000034135	Sik3	5730525O22Rik|9030204A07Rik|AI447252|AI846254|AI849445|Qsk|SIK-3|mKIAA0999	SIK family kinase 3	protein-coding
unique_peak2-38441-7-8--0.370834171144123-1.00793137938329	chr7	27674110	27674684	+	0	NA	Intergenic	IAPEY3-int|LTR|ERVK	50008	NM_001101467	233005	Mm.291574	NM_001101467	ENSMUSG00000091867	Cyp2a22	EG233005	cytochrome P450, family 2, subfamily a, polypeptide 22	protein-coding
common_peak1-18970-12-31--1.35122401491236-1.94790812833823	chr9	55208680	55209337	+	0	NA	intron (NM_172923, intron 1 of 10)	intron (NM_172923, intron 1 of 10)	34252	NM_172923	244886	Mm.24361	NM_172923	ENSMUSG00000032313	AI118078	9630029F15	expressed sequence AI118078	protein-coding
unique_peak2-38211-5-7--0.704380336005853-1.01466476204226	chr6	113660821	113661213	+	0	NA	TTS (NM_001033463)	TTS (NM_001033463)	3815	NR_106009	102465631		NR_106009		Mir7042	mmu-mir-7042	microRNA mir-7042	ncRNA
common_peak2-28172-18-22--0.210642804828661-0.321718508207525	chr4	108847891	108848797	+	0	NA	intron (NM_133885, intron 1 of 22)	intron (NM_133885, intron 1 of 22)	26533	NM_133885	100273	Mm.366315	NM_133885	ENSMUSG00000028559	Osbpl9	2600011I06Rik|AU015843|Orp-9	oxysterol binding protein-like 9	protein-coding
common_peak2-21605-178-184-0.706909352420111-6.5849572336986	chr11	99229870	99231268	+	0	NA	intron (NM_027574, intron 5 of 7)	intron (NM_027574, intron 5 of 7)	5648	NM_027574	70843	Mm.180256	NM_027574	ENSMUSG00000055937	Krt28	4733401L19Rik|Krt25d	keratin 28	protein-coding
common_peak2-29879-22-41--0.745033317691356-1.15174830603352	chr6	108828528	108829556	+	0	NA	Intergenic	RMER6A|LTR|ERVK	50407	NM_138677	192193	Mm.21596	NM_138677	ENSMUSG00000030104	Edem1	A130059K23Rik|EDEM|mKIAA0212	ER degradation enhancer, mannosidase alpha-like 1	protein-coding
unique_peak2-37103-4-12--1.72390023199434-1.85743853830261	chr4	11190205	11190717	+	0	NA	Intergenic	Intergenic	-9055	NM_001159595	72656	Mm.246713	NM_178112	ENSMUSG00000040738	Ints8	2810013E07Rik|AV063769|D130008D20Rik	integrator complex subunit 8	protein-coding
common_peak1-11462-11-16--0.578769256998726-0.503257505534083	chr15	101387226	101387706	+	0	NA	intron (NM_177717, intron 5 of 8)	intron (NM_177717, intron 5 of 8)	5915	NM_177717	239673	Mm.461267	NM_177717	ENSMUSG00000048699	4732456N10Rik	-	RIKEN cDNA 4732456N10 gene	protein-coding
common_peak2-25811-21-23--0.0154732354549205-0.305650498375555	chr19	38024485	38025181	+	0	NA	intron (NM_001099634, intron 24 of 52)	intron (NM_001099634, intron 24 of 52)	93234	NM_001099634	226101	Mm.34674	NM_177035	ENSMUSG00000048612	Myof	2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3	myoferlin	protein-coding
common_peak2-20562-12-20--0.743541437691122-0.625923329873571	chr10	75070491	75071086	+	0	NA	intron (NM_011820, intron 6 of 11)	RLTR20B3|LTR|ERVK	18662	NM_011820	23887	Mm.257927	NM_011820	ENSMUSG00000006344	Ggt5	AI551243|GGL|GGT-REL|Ggtla1	gamma-glutamyltransferase 5	protein-coding
unique_peak2-32688-8-7-0.00522241794757061-1.00793137938329	chr1	138975444	138975859	+	0	NA	Intergenic	Intergenic	-118626	NM_030676	26424	Mm.16794	NM_030676	ENSMUSG00000026398	Nr5a2	AU020803|D1Ertd308e|Ftf|LRH-1|UF2-H3B	nuclear receptor subfamily 5, group A, member 2	protein-coding
common_peak1-8501-14-39--1.42271193452972-2.70027529094734	chr10	81704499	81705108	+	0	NA	promoter-TSS (NM_001105557)	promoter-TSS (NM_001105557)	-783	NM_001105557	237411		NM_172789	ENSMUSG00000062931	Zfp938	B230315N10Rik	zinc finger protein 938	protein-coding
common_peak1-8700-38-41-0.17913523651977-0.420706537898431	chr11	80428493	80429466	+	0	NA	intron (NM_177390, intron 16 of 21)	intron (NM_177390, intron 16 of 21)	138431	NM_009871	12569	Mm.142275	NM_009871	ENSMUSG00000048895	Cdk5r1	Cdk5r|D11Bwg0379e|p25|p35	cyclin-dependent kinase 5, regulatory subunit 1 (p35)	protein-coding
common_peak2-24232-20-37--0.759852728852392-1.13829382151971	chr16	87495198	87496105	+	0	NA	promoter-TSS (NR_040375)	promoter-TSS (NR_040375)	463	NM_009840	12469	Mm.328673	NM_009840	ENSMUSG00000025613	Cct8	AI132397|Cctq|Tcpq	chaperonin containing Tcp1, subunit 8 (theta)	protein-coding
common_peak1-11395-13-9-0.456543935750406-0.53895475198017	chr15	98049963	98050553	+	0	NA	intron (NM_001011780, intron 1 of 2)	B1_Mus1|SINE|Alu	1229	NM_001011780	634104	Mm.259785	NM_001011780	ENSMUSG00000090129	Olfr287	MOR286-1	olfactory receptor 287	protein-coding
common_peak2-29089-6-9--0.75652998450706-1.11707584880836	chr5	121584541	121584881	+	0	NA	intron (NM_011202, intron 15 of 15)	intron (NM_011202, intron 15 of 15)	56695	NM_001109992	19247	Mm.8681	NM_011202	ENSMUSG00000043733	Ptpn11	2700084A17Rik|AW536184|PTP1D|PTP2C|SAP-2|SH-PTP2|SH-PTP3|SHP-2|Shp2|Syp	protein tyrosine phosphatase, non-receptor type 11	protein-coding
common_peak2-27023-12-15--0.351224014912361-0.332077462497413	chr2	173737505	173737938	+	0	NA	Intergenic	Lx7|LINE|L1	-164831	NM_172675	228960	Mm.277977	NM_172675	ENSMUSG00000027522	Stx16	4930401D03|5430410K23Rik|6330500A18Rik|AI648908|AW553605|Syn16	syntaxin 16	protein-coding
common_peak2-30210-6-17--1.60452689106201-1.49151883326343	chr7	111083226	111083722	+	0	NA	Intergenic	Intergenic	-2422	NM_147119	259123	Mm.377861	NM_147119	ENSMUSG00000073938	Olfr632	MOR2-1	olfactory receptor 632	protein-coding
common_peak2-29907-31-23-0.640276170091967-1.01695873136768	chr6	113740046	113740998	+	0	NA	intron (NM_001036684, intron 8 of 19)	B3|SINE|B2	-49847	NM_024206	110379	Mm.29296	NM_024206	ENSMUSG00000030298	Sec13	1110003H02Rik|Sec13l1|Sec13r	SEC13 homolog (S. cerevisiae)	protein-coding
common_peak1-19328-122-186-0.0347578970743516-0.321711553791517	chr9	124423051	124426688	+	0	NA	Intergenic	Intergenic	388587	NM_009917	12774	Mm.14302	NM_009917	ENSMUSG00000079227	Ccr5	AM4-7|CD195|Cmkbr5	chemokine (C-C motif) receptor 5	protein-coding
common_peak2-27375-16-38--1.16713857659419-2.08714016986896	chr3	86223762	86224945	+	0	NA	intron (NM_030695, intron 36 of 56)	intron (NM_030695, intron 36 of 56)	127852	NM_011839	23937	Mm.389466	NM_011839	ENSMUSG00000057777	Mab21l2	-	mab-21-like 2 (C. elegans)	protein-coding
unique_peak2-33837-4-9--1.34538860874061-1.36011389749466	chr12	10412087	10412552	+	0	NA	Intergenic	Intergenic	14733	NM_023697	105014	Mm.119343	NM_023697	ENSMUSG00000020621	Rdh14	3110030G19Rik|AW215439|PAN2	retinol dehydrogenase 14 (all-trans and 9-cis)	protein-coding
common_peak2-27682-23-39--0.600160590378282-0.869438253311888	chr3	116968129	116969257	+	0	NA	Intergenic	Intergenic	95101	NM_177664	229791	Mm.140138	NM_177664	ENSMUSG00000044667	Lppr4	A330086D10|D3Bwg0562e|PRG-1|mKIAA0455	lipid phosphate phosphatase-related protein type 4	protein-coding
unique_peak1-7178-16-4-1.7963355473807-2.18192634393779	chr9	62427044	62427809	+	0	NA	Intergenic	MMERVK10C-int|LTR|ERVK	-42575	NM_175484	235431	Mm.335229	NM_175484	ENSMUSG00000041729	Coro2b	CLIPINC|E130012P22Rik	coronin, actin binding protein, 2B	protein-coding
common_peak1-16181-17-14-0.311405742596519-0.466170754204149	chr5	91533124	91534066	+	0	NA	Intergenic	Intergenic	29952	NM_007950	13874	Mm.4791	NM_007950	ENSMUSG00000029377	Ereg	EPR	epiregulin	protein-coding
unique_peak2-35125-2-6--1.72480917832092-1.26211192963361	chr16	27389832	27390130	+	0	NA	intron (NM_026202, intron 1 of 10)	intron (NM_026202, intron 1 of 10)	939	NM_001289436	67501	Mm.258985	NM_026202	ENSMUSG00000038127	Ccdc50	C3orf6	coiled-coil domain containing 50	protein-coding
unique_peak2-38991-7-8--0.370834171144123-1.00793137938329	chr8	44937909	44938499	+	0	NA	Intergenic	RLTR22_Mur|LTR|ERVK	-153359	NM_001079931	384814	Mm.491652	NM_001079931		Gm5347	EG384814	predicted gene 5347	protein-coding
unique_peak1-6790-10-0-3.35641534500877-3.31132995230379	chr8	69038500	69039014	+	0	NA	3' UTR (NM_001271574, exon 2 of 2)	3' UTR (NM_001271574, exon 2 of 2)	3118	NM_028927	74419	Mm.159193	NM_028927	ENSMUSG00000025519	Tktl2	4933401I19Rik	transketolase-like 2	protein-coding
unique_peak1-6637-6-1-1.5653981103803-1.56314192529759	chr8	10958072	10958598	+	0	NA	Intergenic	Intergenic	-29878	NR_030715	665306	Mm.358758	NR_030715	ENSMUSG00000038917	3930402G23Rik	-	RIKEN cDNA 3930402G23 gene	ncRNA
common_peak1-13282-19-11-0.81772482594053-0.991115276827166	chr19	38023208	38023936	+	0	NA	intron (NM_001099634, intron 25 of 52)	B4A|SINE|B4	94495	NM_001099634	226101	Mm.34674	NM_177035	ENSMUSG00000048612	Myof	2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3	myoferlin	protein-coding
common_peak1-15935-43-54-0.0012034719990428-0.303022200133692	chr5	27790752	27792142	+	0	NA	intron (NM_001136060, intron 4 of 25)	intron (NM_001136060, intron 4 of 25)	36485	NM_028561	73526	Mm.389608	NM_028561	ENSMUSG00000048703	Speer4b	1700081O22Rik|SPEER-4B	spermatogenesis associated glutamate (E)-rich protein 4b	protein-coding
common_peak2-24514-26-14-1.02100849654994-1.59386218057211	chr17	26602758	26603550	+	0	NA	Intergenic	Intergenic	42263	NM_013642	19252	Mm.239041	NM_013642	ENSMUSG00000024190	Dusp1	3CH134|MKP1|Ptpn16|U19515|erp|mkp-1	dual specificity phosphatase 1	protein-coding
common_peak1-16806-81-115-0.0140686078809935-0.304773959985189	chr6	47752446	47754418	+	0	NA	TTS (NR_030485)	TTS (NR_030485)	219	NR_030485	735289		NR_030485		Mir704	Mirn704|mmu-mir-704	microRNA 704	ncRNA
unique_peak1-435-11-2-1.92373108353046-2.32232533660526	chr1	163505441	163505922	+	0	NA	Intergenic	Intergenic	80893	NM_183391	240873	Mm.276823	NM_183391	ENSMUSG00000066755	Tnfsf18	Gitrl	tumor necrosis factor (ligand) superfamily, member 18	protein-coding
unique_peak2-34384-8-22--1.51833953810944-1.77631109801764	chr13	117024006	117024826	+	0	NA	Intergenic	Lx4B|LINE|L1	75480	NM_021459	16392	Mm.42242	NM_021459	ENSMUSG00000042258	Isl1	-	ISL1 transcription factor, LIM/homeodomain	protein-coding
unique_peak2-38708-6-8--0.60452689106201-1.03789460276074	chr7	110190200	110190531	+	0	NA	exon (NM_147053, exon 1 of 1)	exon (NM_147053, exon 1 of 1)	370	NM_147053	259055	Mm.377812	NM_147053	ENSMUSG00000073961	Olfr582	MOR30-3	olfactory receptor 582	protein-coding
unique_peak2-33047-1-7--2.62705701021674-1.80617997398389	chr10	75378865	75379300	+	0	NA	intron (NM_001161853, intron 2 of 8)	intron (NM_001161853, intron 2 of 8)	5277	NM_011418	20587	Mm.279751	NM_011418	ENSMUSG00000000902	Smarcb1	AU020204|Baf47|Ini1|SNF5/INI1|Snf5	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1	protein-coding
unique_peak2-34839-4-6--0.830815435910851-0.989110657569874	chr15	75883718	75884137	+	0	NA	intron (NM_134089, intron 24 of 37)	B3|SINE|B2	11391	NR_105917	102466772		NR_105917		Mir6952	mmu-mir-6952	microRNA mir-6952	ncRNA
common_peak1-9203-10-12--0.344024373132323-0.340565874754526	chr11	80779351	80779826	+	0	NA	intron (NM_001034013, intron 2 of 9)	intron (NM_001034013, intron 2 of 9)	107697	NM_029367	75622	Mm.26988	NM_029367	ENSMUSG00000053184	Spaca3	1700025M08Rik|ALLP17|Lyc3|SLLP1|mSLLP1	sperm acrosome associated 3	protein-coding
unique_peak2-39332-4-14--1.93035110946177-2.23384849113406	chr8	126847332	126847936	+	0	NA	exon (NM_139272, exon 4 of 16)	exon (NM_139272, exon 4 of 16)	92340	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
common_peak1-8274-20-36--0.721378581037757-1.04213512323541	chr10	25272003	25272896	+	0	NA	Intergenic	Intergenic	-16371	NM_001195596	100504474	Mm.46323	NM_001195596	ENSMUSG00000096546	Smlr1	2010003K15Rik	small leucine-rich protein 1	protein-coding
common_peak1-12129-29-40--0.245261924002973-0.373466121463214	chr17	27037503	27038592	+	0	NA	Intergenic	Intergenic	-15989	NM_053173	16580	Mm.491138	NM_016761	ENSMUSG00000024301	Kifc5b	Hset|KNSL2|Kifc5a	kinesin family member C5B	protein-coding
unique_peak1-7095-14-6-1.09186123830004-1.16633110333236	chr9	40783624	40784343	+	0	NA	intron (NM_019465, intron 8 of 9)	ORR1C1|LTR|MaLR	-11788	NM_001081121	70989	Mm.335087	NM_001081121	ENSMUSG00000032023	4931429I11Rik	BB239335|jhy	RIKEN cDNA 4931429I11 gene	protein-coding
common_peak1-11012-60-37-1.10636434817695-4.08971075991015	chr15	37134950	37136318	+	0	NA	Intergenic	Intergenic	-27157	NM_026496	252973	Mm.244612	NM_026496	ENSMUSG00000022286	Grhl2	0610015A08Rik|BOM|Tcfcp2l3	grainyhead-like 2 (Drosophila)	protein-coding
common_peak2-26316-10-18--0.891512168434816-0.804350088532826	chr2	32757186	32757736	+	0	NA	intron (NM_146119, intron 1 of 13)	(TTCC)n|Simple_repeat|Simple_repeat	25807	NM_146119	227737	Mm.301646	NM_146119	ENSMUSG00000026796	Fam129b	9130404D14Rik	family with sequence similarity 129, member B	protein-coding
common_peak2-24728-23-57--1.13621349061849-2.87721178913356	chr17	47436139	47437495	+	0	NA	intron (NM_172622, intron 2 of 16)	intron (NM_172622, intron 2 of 16)	-69019	NM_001146212	64657	Mm.216250	NM_183086	ENSMUSG00000034729	Mrps10	1110038B19Rik|AW743084|Rpms10	mitochondrial ribosomal protein S10	protein-coding
unique_peak2-34425-4-6--0.830815435910851-0.989110657569874	chr14	20229931	20230295	+	0	NA	Intergenic	RLTR10-int|LTR|ERVK	191696	NM_001024706	432825	Mm.327147	NM_001024706	ENSMUSG00000095024	Gm5458	EG432825	predicted gene 5458	protein-coding
common_peak2-27989-6-8--0.60452689106201-1.03789460276074	chr4	44072127	44072569	+	0	NA	intron (NM_001190414, intron 3 of 11)	intron (NM_001190414, intron 3 of 11)	13197	NM_001190414	50798	Mm.256718	NM_015828	ENSMUSG00000028479	Gne	2310066H07Rik|DMRV|GLCNE|IBM2|NM|Uae1	glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase	protein-coding
common_peak1-16612-23-20-0.32945008173032-0.471456499375596	chr5	151233154	151234168	+	0	NA	intron (NM_172887, intron 40 of 60)	intron (NM_172887, intron 40 of 60)	71133	NR_024513	194292	Mm.300184	NR_024513		Gm5	Gm1812	predicted gene 5	ncRNA
common_peak1-11542-41-60--0.229588632714226-0.425219862997755	chr16	4885415	4886796	+	0	NA	promoter-TSS (NM_029657)	promoter-TSS (NM_029657)	5	NM_001252437	17237	Mm.291326	NM_029657	ENSMUSG00000022517	Mgrn1	2610042J20Rik|mKIAA0544|md|nc	mahogunin, ring finger 1	protein-coding
common_peak1-14274-17-13-0.410941416147434-0.546772548767014	chr2	156420548	156421497	+	0	NA	Intergenic	MER46C|DNA|MER2_type	18136	NR_040372	100504350	Mm.94426	NR_040372	ENSMUSG00000086118	Gm14169	OTTMUSG00000015869	predicted gene 14169	ncRNA
common_peak1-18945-25-37--0.386077608098479-0.512115693271959	chr9	48410361	48411349	+	0	NA	intron (NM_010924, intron 2 of 2)	L1M2|LINE|L1	2327	NM_010924	18113	Mm.8362	NM_010924	ENSMUSG00000032271	Nnmt	-	nicotinamide N-methyltransferase	protein-coding
unique_peak1-4700-7-0-2.79909083029819-2.40823996531185	chr3	99195864	99196383	+	0	NA	Intergenic	L1Md_F2|LINE|L1	138440	NM_009323	21384	Mm.88761	NM_009323	ENSMUSG00000027868	Tbx15	Tbx14|Tbx8|de	T-box 15	protein-coding
common_peak1-19373-14-8-0.729291158915332-0.771068449301682	chrX	20704480	20705129	+	0	NA	Intergenic	Intergenic	-38449	NM_183185	245368	Mm.220470	NM_183185	ENSMUSG00000031079	Zfp300	D930016N04Rik	zinc finger protein 300	protein-coding
common_peak2-31781-65-148--0.727002580985034-3.4014129122345	chr9	25251526	25253584	+	0	NA	Intergenic	Intergenic	-36627	NM_026189	67484	Mm.112977	NM_026189	ENSMUSG00000036611	Eepd1	2310005P05Rik|AI481005	endonuclease/exonuclease/phosphatase family domain containing 1	protein-coding
common_peak1-9339-11-8-0.338768582809301-1.14218153353838	chr11	96005371	96005852	+	0	NA	intron (NM_172799, intron 7 of 14)	intron (NM_172799, intron 7 of 14)	10511	NM_172799	237930	Mm.249912	NM_172799	ENSMUSG00000038756	Ttll6	4932418K24Rik|D11Moh43e|D11Moh44e|t8130b59	tubulin tyrosine ligase-like family, member 6	protein-coding
unique_peak1-3028-12-2-2.06381348436648-2.79529063155376	chr18	36421461	36421951	+	0	NA	Intergenic	Intergenic	-19110	NM_008989	19290	Mm.231802	NM_008989		Pura	CAGER-1|Pur-alpha|ssCRE-BP	purine rich element binding protein A	protein-coding
unique_peak1-6979-10-3-1.35641534500877-1.75805390616669	chr8	119713583	119714118	+	0	NA	intron (NM_001081151, intron 3 of 10)	B3A|SINE|B2	31815	NM_001081151	209239	Mm.132992	NM_001081151	ENSMUSG00000052557	Gan	A330045G18|gigaxonin	giant axonal neuropathy	protein-coding
unique_peak2-39346-9-29--1.7172771892043-2.70611768348013	chr9	57261920	57262789	+	0	NA	3' UTR (NM_176831, exon 7 of 7)	3' UTR (NM_176831, exon 7 of 7)	23477	NR_040729	73772	Mm.444684	NR_040729		4930430J02Rik	-	RIKEN cDNA 4930430J02 gene	ncRNA
common_peak1-9165-16-30--0.835932668118813-1.0921097739129	chr11	78079835	78080604	+	0	NA	exon (NM_001002004, exon 9 of 39)	exon (NM_001002004, exon 9 of 39)	4963	NM_001002004	72503	Mm.237103	NM_001002004	ENSMUSG00000010277	2610507B11Rik	AU022687|D11Bhm178e|D11Bhm179e|E1|Kiaa0100|mKIAA0100	RIKEN cDNA 2610507B11 gene	protein-coding
common_peak2-22173-20-26--0.266812717572275-0.373496418836697	chr12	100159344	100159976	+	0	NA	intron (NM_029553, intron 1 of 13)	intron (NM_029553, intron 1 of 13)	838	NM_198311	76260	Mm.282660	NM_029553	ENSMUSG00000021013	Ttc8	0610012F22Rik|AV001447|BBS8	tetratricopeptide repeat domain 8	protein-coding
common_peak2-21790-20-12-0.787635066450101-0.949240599462708	chr11	117962520	117963146	+	0	NA	intron (NM_001167746, intron 21 of 80)	B3|SINE|B2	27700	NM_001167746	69926	Mm.473893	NM_001167746	ENSMUSG00000033987	Dnah17	2810003K23Rik|Dnahc17|Dnahcl1|Gm1178|mKIAA3028	dynein, axonemal, heavy chain 17	protein-coding
unique_peak2-37608-8-7-0.00522241794757061-1.00793137938329	chr5	64196981	64197381	+	0	NA	exon (NM_177006, exon 7 of 7)	exon (NM_177006, exon 7 of 7)	-6553	NM_029554	76261	Mm.38143	NM_029554	ENSMUSG00000060512	0610040J01Rik	AI662686	RIKEN cDNA 0610040J01 gene	protein-coding
unique_peak2-33640-10-11--0.228547155712387-0.31137425193576	chr11	98751053	98751546	+	0	NA	intron (NM_197940, intron 2 of 7)	B1_Mus2|SINE|Alu	-17904	NM_001025779	23834	Mm.20912	NM_011799	ENSMUSG00000017499	Cdc6	CDC18L	cell division cycle 6	protein-coding
common_peak2-22684-8-6-0.197867495889966-1.03789460276074	chr13	98317417	98317803	+	0	NA	Intergenic	B4|SINE|B4	-12345	NR_046157	328314	Mm.138047	NR_046157		Gm5086	B230311A21|EG328314	predicted gene 5086	ncRNA
common_peak1-9053-12-5-1.06381348436648-1.78669045979184	chr11	68314153	68314861	+	0	NA	Intergenic	Intergenic	-2014	NM_001004435	104709	Mm.234573	NM_001004435	ENSMUSG00000046207	Pik3r6	BB220380|p84|p84 PIKAP|p87(PIKAP)|p87PIKAP	phosphoinositide-3-kinase, regulatory subunit 6	protein-coding
unique_peak2-35363-18-32--0.731474968130102-0.907815120698057	chr17	26932497	26933801	+	0	NA	Intergenic	B3|SINE|B2	15125	NM_172149	224630	Mm.21795	NM_172149	ENSMUSG00000024191	Bnip1	2010005M06Rik|5930429G21Rik|Sec20	BCL2/adenovirus E1B interacting protein 1	protein-coding
common_peak2-27937-13-18--0.469455482805817-0.409888142029227	chr4	24495879	24496372	+	0	NA	intron (NM_199467, intron 13 of 23)	intron (NM_199467, intron 13 of 23)	72516	NM_199467	212377	Mm.120919	NM_199467	ENSMUSG00000045751	Mms22l	F730047E07Rik|Gm134	MMS22-like, DNA repair protein	protein-coding
common_peak2-23805-20-34--0.641208232353773-0.863762398024911	chr15	100303966	100304914	+	0	NA	intron (NM_134093, intron 4 of 8)	intron (NM_134093, intron 4 of 8)	4975	NM_134093	68614	Mm.275272	NM_134093	ENSMUSG00000037353	Letmd1	1110019O13Rik|AI593524|BB130465|BB235638|HCCR-2|HCCR1|MCC-32|Mccr	LETM1 domain containing 1	protein-coding
unique_peak2-36452-6-26--2.18948939178317-3.22740510021752	chr2	139678113	139678804	+	0	NA	intron (NM_001159640, intron 13 of 13)	L1M5|LINE|L1	174544	NM_001276489	319909	Mm.41113	NM_001126490	ENSMUSG00000074766	Ism1	5430433G21Rik|Ism	isthmin 1 homolog (zebrafish)	protein-coding
unique_peak2-32850-6-16--1.52206473087004-1.32521814697968	chr1	194620230	194620981	+	0	NA	Intergenic	HAL1-2a_MD|LINE|L1	-23192	NM_144881	226861	Mm.145857	NM_144881	ENSMUSG00000037375	Hhat	2810432O22Rik|AI462858|AP-2CRE|Skn|Tg(TFAP2A-cre)1Will	hedgehog acyltransferase	protein-coding
common_peak1-17454-22-23-0.0623216043662485-0.319130838712456	chr7	19094356	19095378	+	0	NA	Intergenic	Intergenic	22709	NM_054060	114868	Mm.389809	NM_054060	ENSMUSG00000070798	Psg25	cea13	pregnancy-specific glycoprotein 25	protein-coding
common_peak2-21090-68-95--0.0150017214228599-0.301029995663994	chr11	51605967	51607015	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	29326	NM_025535	66397	Mm.196592	NM_025535	ENSMUSG00000020386	Sar1b	2310075M17Rik|2900019I22Rik|CMRD|Sara1b|Sara2|Sarb	SAR1 gene homolog B (S. cerevisiae)	protein-coding
unique_peak1-3070-8-2-1.42025991722641-1.65811743852845	chr18	12235491	12236012	+	0	NA	intron (NM_001289667, intron 3 of 12)	intron (NM_001289667, intron 3 of 12)	44295	NR_110356	338363	Mm.271567	NM_178801	ENSMUSG00000049411	Tmem241	6030446N20Rik	transmembrane protein 241	protein-coding
unique_peak1-2753-14-5-1.31425365963649-1.4372489031793	chr17	3394542	3395216	+	0	NA	intron (NM_001122998, intron 1 of 26)	B4A|SINE|B4	-2328	NM_011878	24001	Mm.137134	NM_011878	ENSMUSG00000023800	Tiam2	3000002F19Rik|STEF|mKIAA2016	T cell lymphoma invasion and metastasis 2	protein-coding
common_peak1-14272-30-43--0.289756209145424-0.435893058718175	chr2	156311818	156312775	+	0	NA	intron (NM_001006664, intron 1 of 21)	MIR|SINE|MIR	11026	NM_001006664	13821	Mm.20852	NM_013510	ENSMUSG00000027624	Epb4.1l1	4.1N|Epb41l1|NBL1|mKIAA0338	erythrocyte protein band 4.1-like 1	protein-coding
common_peak2-21019-30-37--0.0782521039517121-0.304004708442489	chr11	30953472	30954952	+	0	NA	intron (NM_023906, intron 3 of 9)	L1Md_F2|LINE|L1	-67847	NM_001290667	68044	Mm.32656	NM_026527	ENSMUSG00000020309	Chac2	-	ChaC, cation transport regulator 2	protein-coding
unique_peak1-1262-9-0-3.18961340640422-3.01029995663981	chr11	116850101	116850572	+	0	NA	Intergenic	Intergenic	70159	NM_172948	268510	Mm.35141	NM_172948	ENSMUSG00000043857	Mgat5b	C330018B01|GnT-IX|mGnTVB	mannoside acetylglucosaminyltransferase 5, isoenzyme B	protein-coding
unique_peak2-37445-6-8--0.60452689106201-1.03789460276074	chr4	155654633	155655033	+	0	NA	Intergenic	Intergenic	-45867	NM_198305	231003	Mm.423038	NM_198305	ENSMUSG00000078484	Klhl17	AL022703|BC058738	kelch-like 17	protein-coding
unique_peak1-4667-7-0-2.79909083029819-2.40823996531185	chr3	92571961	92572486	+	0	NA	Intergenic	Intergenic	-3236	NM_026335	67718	Mm.23784	NM_026335	ENSMUSG00000049593	Lce1h	2310066F03Rik|AI426284|Sprrl9	late cornified envelope 1H	protein-coding
unique_peak1-2157-24-5-2.20824740204656-4.1393347358673	chr15	59479465	59480590	+	0	NA	promoter-TSS (NM_144549)	promoter-TSS (NM_144549)	-182	NM_144549	211770	Mm.40298	NM_144549	ENSMUSG00000032501	Trib1	A530090O15Rik|TRB-1|Trb1	tribbles homolog 1 (Drosophila)	protein-coding
common_peak1-15616-17-14-0.311405742596519-0.466170754204149	chr4	133038789	133039592	+	0	NA	intron (NM_175307, intron 1 of 1)	intron (NM_175307, intron 1 of 1)	3142	NM_175307	100342	Mm.204656	NM_175307	ENSMUSG00000046694	Fam46b	4732473B16Rik|AU045678|AU046069	family with sequence similarity 46, member B	protein-coding
unique_peak1-5752-16-4-1.7963355473807-2.18192634393779	chr6	50365276	50365965	+	0	NA	intron (NM_001163645, intron 2 of 21)	intron (NM_001163645, intron 2 of 21)	-32784	NM_027881	71720	Mm.44153	NM_027881	ENSMUSG00000029822	Osbpl3	1200014M06Rik|6720421I08Rik|A530055M08|ORP3|OSBP3	oxysterol binding protein-like 3	protein-coding
unique_peak2-35376-2-6--1.72480917832092-1.26211192963361	chr17	28914321	28914717	+	0	NA	intron (NM_011950, intron 9 of 11)	intron (NM_011950, intron 9 of 11)	8257	NM_011950	26415	Mm.27970	NM_011950	ENSMUSG00000004864	Mapk13	SAPK4|Serk4	mitogen-activated protein kinase 13	protein-coding
common_peak2-22301-23-24-0.0779113147343562-0.318406410381916	chr13	17992764	17993567	+	0	NA	intron (NM_019491, intron 1 of 4)	intron (NM_019491, intron 1 of 4)	42886	NM_019491	56044	Mm.27348	NM_019491	ENSMUSG00000008859	Rala	3010001O15Rik|AW322615|Ral|Rasl1	v-ral simian leukemia viral oncogene homolog A (ras related)	protein-coding
unique_peak2-33882-3-5--0.998945590680433-0.96108193396963	chr12	32061314	32061626	+	0	NA	Intergenic	B4A|SINE|B4	-25134	NM_007861	13382	Mm.3131	NM_007861	ENSMUSG00000020664	Dld	-	dihydrolipoamide dehydrogenase	protein-coding
common_peak2-25840-12-6-0.841421063030034-1.58711810488664	chr19	41474502	41474894	+	0	NA	Intergenic	Lx8|LINE|L1	-15138	NM_031376	83490	Mm.222266	NM_031376	ENSMUSG00000025017	Pik3ap1	1810044J04Rik|BCAP	phosphoinositide-3-kinase adaptor protein 1	protein-coding
common_peak2-29451-6-5--0.0195643903408542-0.947717972411649	chr6	22353106	22353369	+	0	NA	Intergenic	Intergenic	-47156	NM_138587	27999	Mm.490307	NM_138587	ENSMUSG00000029672	Fam3c	D6Wsu176e|Ilei	family with sequence similarity 3, member C	protein-coding
common_peak1-16695-12-10-0.189344366450341-0.386243247519795	chr6	17306850	17307421	+	0	NA	Intergenic	Lx7|LINE|L1	49495	NM_001243064	12389	Mm.28278	NM_007616	ENSMUSG00000007655	Cav1	Cav|Cav-1	caveolin 1, caveolae protein	protein-coding
common_peak2-30227-16-30--0.835932668118813-1.0921097739129	chr7	3703558	3704550	+	0	NA	intron (NM_001289428, intron 12 of 12)	L1Md_F2|LINE|L1	-32070	NM_011095	18733	Mm.326531	NM_011095		Pirb	Gp91|LIR-3|Lilrb3|PIR-B	paired Ig-like receptor B	protein-coding
common_peak2-29725-19-18-0.154759813218101-0.351190433797598	chr6	84312930	84313826	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	60454	NR_046063	100038556	Mm.387783	NR_046063		Gm10445	ENSMUSG00000072956	predicted gene 10445	ncRNA
common_peak2-29095-12-8-0.478850983645327-0.562038191119709	chr5	122391883	122392424	+	0	NA	intron (NM_007804, intron 2 of 22)	B4A|SINE|B4	93116	NM_175474	231717	Mm.12654	NM_175474	ENSMUSG00000044134	Fam109a	A230106M15Rik|AU017694|IPIP27A|Ses1	family with sequence similarity 109, member A	protein-coding
unique_peak1-4951-12-0-3.64877598508764-4.21441993929574	chr4	97689454	97690041	+	0	NA	intron (NM_001122953, intron 6 of 9)	intron (NM_001122953, intron 6 of 9)	245430	NM_010905	18027	Mm.31274	NM_010905	ENSMUSG00000028565	Nfia	1110047K16Rik|9430022M17Rik|CTF|NF1-A|NF1A	nuclear factor I/A	protein-coding
unique_peak1-2773-14-2-2.31425365963649-3.28500101358144	chr17	6399613	6400314	+	0	NA	Intergenic	Intergenic	-29297	NM_009342	21648	Mm.1948	NM_009342	ENSMUSG00000096255	Dynlt1b	AGS2|Dynlt1|Tctex-1|Tctex1	dynein light chain Tctex-type 1B	protein-coding
common_peak1-11584-23-56--1.11112250965566-2.74059030423418	chr16	15593895	15594790	+	0	NA	intron (NM_023585, intron 1 of 3)	CpG	269	NM_001159351	70620	Mm.235407	NM_023585		Ube2v2	1110021H13Rik|4632410D19Rik|5730524P06Rik|6820402M05|AI848315|C81524|MMS2	ubiquitin-conjugating enzyme E2 variant 2	protein-coding
common_peak1-17536-24-47--0.791752597953439-1.35770911664594	chr7	28924646	28925539	+	0	NA	exon (NM_001164655, exon 5 of 20)	exon (NM_001164655, exon 5 of 20)	10607	NM_001164655	319482	Mm.483194	NM_176924	ENSMUSG00000078776	9530053A07Rik	FCGBP	RIKEN cDNA 9530053A07 gene	protein-coding
unique_peak2-36855-3-6--1.22133801201688-1.08602067057793	chr3	89402186	89402593	+	0	NA	intron (NM_080466, intron 2 of 7)	intron (NM_080466, intron 2 of 7)	78303	NM_080466	140493	Mm.120250	NM_080466		Kcnn3	KCa2.3|SK3|SKCA3	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	protein-coding
unique_peak1-4608-13-2-2.19350952991661-3.03832868024006	chr3	65843489	65844045	+	0	NA	Intergenic	Intergenic	-81620	NM_019937	56706	Mm.175612	NM_019937	ENSMUSG00000027829	Ccnl1	2610030E23Rik|AU018493|Ccnl|ania-6a	cyclin L1	protein-coding
common_peak2-26891-22-19-0.325356010200042-0.479250674391597	chr2	157451734	157452709	+	0	NA	Intergenic	RSINE1|SINE|B4	-60124	NM_016916	53619	Mm.480461	NM_016916	ENSMUSG00000067787	Blcap	AI462828|Bc10	bladder cancer associated protein homolog (human)	protein-coding
common_peak2-24951-59-150--0.913040738452501-5.00141453204084	chr18	61554529	61556107	+	0	NA	intron (NM_133249, intron 1 of 11)	intron (NM_133249, intron 1 of 11)	4767	NM_133249	170826	Mm.415302	NM_133249	ENSMUSG00000033871	Ppargc1b	4631412G21Rik|Perc	peroxisome proliferative activated receptor, gamma, coactivator 1 beta	protein-coding
common_peak1-17655-19-7-1.40268732666169-1.89173646618542	chr7	60491579	60492436	+	0	NA	Intergenic	Intergenic	655252	NR_105746	102466619		NR_105746	miRBase:MI0021585	Mir6238	mmu-mir-6238	microRNA mir-6238	ncRNA
unique_peak1-3041-20-2-2.90311228387004-4.53603905993749	chr18	5186133	5187072	+	0	NA	Intergenic	Intergenic	140015	NM_153153	225115	Mm.136791	NM_153153	ENSMUSG00000024236	Svil	AU024053|B430302E16Rik	supervillin	protein-coding
common_peak1-12648-9-7-0.18961340640422-1.05908390183068	chr18	35703131	35703525	+	0	NA	Intergenic	MIRc|SINE|MIR	-9736	NR_038073	100503380	Mm.482118	NR_038073	ENSMUSG00000097769	Snhg4	Gm17457	small nucleolar RNA host gene 4	ncRNA
unique_peak2-35202-8-6-0.197867495889966-1.03789460276074	chr16	84680419	84680902	+	0	NA	intron (NR_040537, intron 1 of 2)	intron (NR_040537, intron 1 of 2)	626	NR_040537	78023	Mm.243853	NR_040537		4930529L06Rik	-	RIKEN cDNA 4930529L06 gene	ncRNA
common_peak2-28662-13-14--0.12841856497075-0.301029995663977	chr5	31575941	31576681	+	0	NA	intron (NR_105788, intron 7 of 7)	B3A|SINE|B2	17176	NM_026298	67661	Mm.293023	NM_026298	ENSMUSG00000038564	Ift172	4930553F24Rik|Slb|avc1|wim	intraflagellar transport 172	protein-coding
common_peak1-13193-26-10-1.46846747352116-2.57346781069461	chr19	20601142	20601851	+	0	NA	intron (NR_015502, intron 2 of 3)	L1Md_T|LINE|L1	25324	NR_045778	320155	Mm.447252	NR_045778		C730002L08Rik	-	RIKEN cDNA C730002L08 gene	ncRNA
common_peak1-16356-18-23--0.272043349492805-0.34651636097721	chr5	121660374	121661151	+	0	NA	Intergenic	Intergenic	6252	NM_011290	19988	Mm.262021	NM_011290	ENSMUSG00000029614	Rpl6	Taxreb107	ribosomal protein L6	protein-coding
unique_peak1-4565-17-2-2.63333383748388-3.75443312462699	chr3	52381647	52382446	+	0	NA	Intergenic	Intergenic	-161600	NR_038079	329639	Mm.131245	NR_038079		Gm2447	100039832|A530017F20	predicted gene 2447	ncRNA
common_peak2-21441-25-20-0.469532482566345-0.662033714151238	chr11	86592340	86593176	+	0	NA	intron (NM_026191, intron 12 of 17)	B4|SINE|B4	-21764	NM_001003908	67300	Mm.254588	NM_001003908	ENSMUSG00000047126	Cltc	3110065L21Rik|CHC|R74732	clathrin, heavy polypeptide (Hc)	protein-coding
common_peak1-7533-43-19-1.46063509063634-4.27036875499349	chr1	34432754	34434157	+	0	NA	Intergenic	Intergenic	56589	NR_039562	100628580		NR_039562	miRBase:MI0018011	Mir5103	mmu-mir-5103|mu-mir-5103	microRNA 5103	ncRNA
common_peak2-26221-62-61-0.45655514841521-1.1616210394491	chr2	26932636	26934185	+	0	NA	Intergenic	Intergenic	-1491	NM_029981	77794	Mm.330088	NM_029981	ENSMUSG00000036040	Adamtsl2	A930008K15Rik|tcp-1	ADAMTS-like 2	protein-coding
common_peak1-11316-72-120--0.250279424402277-0.618295750456569	chr15	85335693	85337483	+	0	NA	Intergenic	Intergenic	-2931	NM_001256072	328577	Mm.212960	NM_001256072	ENSMUSG00000096607	7530416G11Rik	-	RIKEN cDNA 7530416G11 gene	protein-coding
unique_peak2-34211-4-16--2.11092335510359-1.97518968347063	chr13	43398313	43398771	+	0	NA	intron (NM_001033399, intron 1 of 1)	intron (NM_001033399, intron 1 of 1)	999	NM_001033399	328232	Mm.441399	NM_001033399	ENSMUSG00000051335	Gfod1	9630032O13|AI850995	glucose-fructose oxidoreductase domain containing 1	protein-coding
unique_peak1-3245-20-9-1.16614668970383-1.52222891542741	chr18	64337869	64338939	+	0	NA	intron (NR_045366, intron 2 of 5)	intron (NR_045366, intron 2 of 5)	-75609	NM_009182	20451	Mm.252110	NM_009182	ENSMUSG00000056812	St8sia3	AI847333|ST8SiaIII|Siat8c	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	protein-coding
common_peak2-21513-54-55-0.36573083957213-0.796654548817852	chr11	94321294	94322391	+	0	NA	intron (NM_001177888, intron 7 of 34)	intron (NM_001177888, intron 7 of 34)	13670	NM_001177888	12291	Mm.29585	NM_009783	ENSMUSG00000020866	Cacna1g	Cav3.1d|[a]1G|a1G|alpha-1G|mKIAA1123	calcium channel, voltage-dependent, T type, alpha 1G subunit	protein-coding
unique_peak2-33891-5-6--0.511735258063458-0.947717972411649	chr12	40445373	40445740	+	0	NA	Intergenic	Intergenic	318407	NM_007487	11861	Mm.12723	NM_007487	ENSMUSG00000047446	Arl4a	AI467555|Arl4	ADP-ribosylation factor-like 4A	protein-coding
common_peak1-14597-18-38--0.972483067633897-1.53432270224293	chr3	51408310	51409080	+	0	NA	Intergenic	Lx6|LINE|L1	-43950	NM_080793	73251	Mm.192111	NM_080793	ENSMUSG00000037111	Setd7	1600028F23Rik|H3K4MT|KMT7|Set7|Set7/9|mKIAA1717	SET domain containing (lysine methyltransferase) 7	protein-coding
common_peak2-21588-24-27--0.0141450192898871-0.304978344874324	chr11	98400143	98400816	+	0	NA	intron (NM_011771, intron 1 of 7)	intron (NM_011771, intron 1 of 7)	6866	NM_011771	22780	Mm.133367	NM_011771	ENSMUSG00000018168	Ikzf3	5830411O07Rik|Aiolos|Zfpn1a3|Znfn1a3	IKAROS family zinc finger 3	protein-coding
unique_peak2-35964-3-6--1.22133801201688-1.08602067057793	chr19	17316347	17316758	+	0	NA	Intergenic	L1_Mus4|LINE|L1	97443	NM_001136484	14537	Mm.244825	NM_010265	ENSMUSG00000038843	Gcnt1	5630400D21Rik|B130048E03|C2 GlcNAcT|C2GNT|IGnT	glucosaminyl (N-acetyl) transferase 1, core 2	protein-coding
common_peak1-11118-10-9-0.0344872501214071-1.05503135781948	chr15	63341115	63341587	+	0	NA	Intergenic	MTE2b-int|LTR|MaLR	-30188	NR_045279	432958	Mm.255105	NR_045279		Gm20740	-	predicted gene, 20740	ncRNA
unique_peak2-36710-2-6--1.72480917832092-1.26211192963361	chr3	51553456	51553854	+	0	NA	intron (NM_001004176, intron 2 of 4)	intron (NM_001004176, intron 2 of 4)	88540	NM_174995	211666	Mm.24679	NM_174995	ENSMUSG00000074604	Mgst2	GST2|MGST-II	microsomal glutathione S-transferase 2	protein-coding
unique_peak2-33346-4-23--2.6084230145744-3.50999844001529	chr11	25099983	25100266	+	0	NA	Intergenic	L1Md_A|LINE|L1	-125983	NR_045853	71234	Mm.158627	NR_045853	ENSMUSG00000033015	4933427E13Rik	-	RIKEN cDNA 4933427E13 gene	ncRNA
common_peak1-15561-9-6-0.382258484346616-1.11707584880836	chr4	125123200	125123682	+	0	NA	Intergenic	Intergenic	-44634	NM_001081097	14807	Mm.40896	NM_001081097	ENSMUSG00000001985	Grik3	9630027E11|GluK3|GluR7-3|Glur-7|Glur7	glutamate receptor, ionotropic, kainate 3	protein-coding
common_peak2-25170-84-68-0.826409602110856-3.68005039712626	chr18	53744122	53746053	+	0	NA	Intergenic	MLT1C|LTR|MaLR	-62718	NR_040349	100502945	Mm.376937	NR_040349		Gm19466	-	predicted gene, 19466	ncRNA
common_peak1-14942-103-154-0.0118733405858027-0.303831914984945	chr3	103057976	103059255	+	0	NA	Intergenic	Intergenic	-24601	NM_053170	94093	Mm.195036	NM_053170	ENSMUSG00000033014	Trim33	8030451N04Rik|AI413936|Ecto|Tif1g	tripartite motif-containing 33	protein-coding
unique_peak2-35030-5-12--1.40482005414695-1.62698961692433	chr15	103304662	103305202	+	0	NA	intron (NM_153505, intron 16 of 30)	B3A|SINE|B2	20676	NM_153505	105855	Mm.30805	NM_153505	ENSMUSG00000022488	Nckap1l	4930568P13Rik|AI463083|Hem1|Hemp1	NCK associated protein 1 like	protein-coding
common_peak1-13482-41-11-2.1161862041275-6.59495851266917	chr2	25148662	25150640	+	0	NA	intron (NM_001242940, intron 2 of 3)	intron (NM_001242940, intron 2 of 3)	2911	NM_001242940	320354	Mm.445875	NM_001242940		Grin1os	E130003G02Rik	glutamate receptor, ionotropic, NMDA1 (zeta 1), opposite strand	protein-coding
unique_peak1-3091-9-0-3.18961340640422-3.01029995663981	chr18	24944113	24944680	+	0	NA	intron (NM_001289654, intron 3 of 24)	intron (NM_001289654, intron 3 of 24)	77272	NM_001289655	225288	Mm.329322	NM_175276	ENSMUSG00000034295	Fhod3	A930009H06Rik|FHOS2|mKIAA1695	formin homology 2 domain containing 3	protein-coding
common_peak1-9928-23-29--0.185123091099438-0.336580821310529	chr12	102282658	102283488	+	0	NA	intron (NM_001160214, intron 10 of 14)	intron (NM_001160214, intron 10 of 14)	-15880	NM_026681	68339	Mm.156217	NM_026681	ENSMUSG00000021182	Ccdc88c	0610010D24Rik|AV000935|AW324073|Daple|mKIAA1509	coiled-coil domain containing 88C	protein-coding
common_peak2-29780-15-10-0.552733131918359-0.604422558181019	chr6	88923978	88924469	+	0	NA	Intergenic	Intergenic	71978	NM_011906	24100	Mm.284480	NM_011906	ENSMUSG00000002871	Tpra1	40kDa|Gpr175|Tpra40	transmembrane protein, adipocyte asscociated 1	protein-coding
common_peak1-14265-28-38--0.232443099040786-0.377553616161376	chr2	156065013	156065842	+	0	NA	intron (NM_172674, intron 2 of 17)	intron (NM_172674, intron 2 of 17)	43044	NM_172674	228829	Mm.427078	NM_172674	ENSMUSG00000038116	Phf20	6820402O20Rik	PHD finger protein 20	protein-coding
unique_peak1-3922-13-5-1.19350952991661-1.95509489018123	chr2	25473035	25473630	+	0	NA	promoter-TSS (NM_029859)	promoter-TSS (NM_029859)	-134	NM_029859	77058	Mm.478493	NM_029859	ENSMUSG00000026940	Ccdc183	4921530D09Rik|Cccd183|Kiaa1984	coiled-coil domain containing 183	protein-coding
unique_peak1-5659-15-6-1.20480982849805-1.32521814697968	chr6	30460517	30461062	+	0	NA	intron (NM_027073, intron 1 of 2)	intron (NM_027073, intron 1 of 2)	940	NM_027073	75647	Mm.46117	NM_027073	ENSMUSG00000029784	Ssmem1	1700016K02Rik|1700025E21Rik	serine-rich single-pass membrane protein 1	protein-coding
common_peak1-11967-82-66-0.827173953847963-3.64479759041747	chr17	6807857	6810058	+	0	NA	intron (NM_001166627, intron 2 of 4).3	B2_Mm1t|SINE|B2	2461	NM_001166630	100040563	Mm.457381	NM_001166630		Dynlt1c	100040603|Dynlt1d	dynein light chain Tctex-type 1C	protein-coding
common_peak2-25048-17-7-1.21829633820504-1.55050753388977	chr18	32147101	32147588	+	0	NA	intron (NM_032394, intron 19 of 46)	(CA)n|Simple_repeat|Simple_repeat	-38054	NM_001025381	574402	Mm.391108	NM_001025381	ENSMUSG00000052229	Gpr17	AI853548	G protein-coupled receptor 17	protein-coding
common_peak2-23302-56-75--0.012331688004342-0.301029995664007	chr15	35370897	35372024	+	0	NA	intron (NM_177151, intron 8 of 61)	Lx3B|LINE|L1	70159	NM_177151	666173	Mm.309250	NM_177151	ENSMUSG00000037646	Vps13b	1810042B05Rik|2310042E16Rik|4732488H20|C330002D13Rik|C87206|Coh1|D230005K13|mKIAA0532|mKIAA5032	vacuolar protein sorting 13B (yeast)	protein-coding
common_peak1-15323-15-23--0.5727977501655-0.575340103425218	chr4	46138361	46139136	+	0	NA	intron (NM_173033, intron 4 of 9)	intron (NM_173033, intron 4 of 9)	12599	NM_173033	272027	Mm.331588	NM_173033	ENSMUSG00000035495	Tstd2	3010020C06	thiosulfate sulfurtransferase (rhodanese)-like domain containing 2	protein-coding
common_peak2-28312-12-12--0.0516637330534535-0.309718203022949	chr4	133277276	133277969	+	0	NA	intron (NM_001080819, intron 2 of 19)	ID_B1|SINE|B4	-4599	NR_106086	102465707		NR_106086		Mir7227	mmu-mir-7227	microRNA mir-7227	ncRNA
unique_peak1-6605-9-3-1.18961340640422-1.57096726280955	chr8	81854174	81854756	+	0	NA	Intergenic	Intergenic	35488	NR_045823	234479	Mm.238026	NR_045822	ENSMUSG00000097174	Gm4890	A630049P17	predicted gene 4890	ncRNA
common_peak2-19945-32-94--1.29076358911129-5.3912890827562	chr1	131096526	131097997	+	0	NA	Intergenic	Intergenic	-72620	NM_172485	210417	Mm.380518	NM_172485	ENSMUSG00000042581	Thsd7b	1700074E13Rik|B930082A18|D130067I03Rik	thrombospondin, type I, domain containing 7B	protein-coding
common_peak2-19917-21-29--0.337401330342283-0.403610417161439	chr1	125561034	125561608	+	0	NA	intron (NM_199021, intron 4 of 25)	Lx2|LINE|L1	380815	NM_199021	269109	Mm.483255	NM_199021	ENSMUSG00000036815	Dpp10	6430601K09Rik|DPP X|Dprp3	dipeptidylpeptidase 10	protein-coding
unique_peak2-35156-4-6--0.830815435910851-0.989110657569874	chr16	33769497	33769897	+	0	NA	Intergenic	PB1D10|SINE|Alu	-24426	NM_010739	17063	Mm.3177	NM_010739	ENSMUSG00000022824	Muc13	114/A10|14/A10|AI159736|Lrrp|Ly64|NJ-1	mucin 13, epithelial transmembrane	protein-coding
common_peak2-26116-19-17-0.232762325219374-0.392630012299441	chr2	6071384	6072204	+	0	NA	Intergenic	Intergenic	17865	NR_033471	100038358	Mm.353975	NR_033470		Gm10857	AU015850|ENSMUSG00000075545	predicted gene 10857	ncRNA
common_peak2-31105-17-13-0.410941416147434-0.546772548767014	chr8	27260279	27260879	+	0	NA	Intergenic	Intergenic	-8062	NM_199042	73754	Mm.383241	NM_199042		Thap1	4833431A01Rik|AW490810	THAP domain containing, apoptosis associated protein 1	protein-coding
common_peak1-11009-58-61-0.341753624503622-0.804964541269708	chr15	36937042	36938725	+	0	NA	promoter-TSS (NM_026521)	promoter-TSS (NM_026521)	-726	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
common_peak2-31160-31-21-0.765807052175826-1.27201509741564	chr8	45528192	45529037	+	0	NA	Intergenic	Intergenic	-506948	NM_001081286	14107	Mm.27365	NM_001081286	ENSMUSG00000070047	Fat1	2310038E12Rik|AU023433|Fath|mFat1	FAT tumor suppressor homolog 1 (Drosophila)	protein-coding
common_peak1-18384-48-58-0.088284101872973-0.345907904941242	chr8	70872832	70874369	+	0	NA	Intergenic	Intergenic	-18758	NR_038189	73609	Mm.443247	NR_038181	ENSMUSG00000085197	1700125H03Rik	4930510D22Rik	RIKEN cDNA 1700125H03 gene	ncRNA
common_peak1-11179-7-6--0.00826409175941478-0.97990265578305	chr15	76590311	76590815	+	0	NA	intron (NM_198420, intron 2 of 10)	ORR1E|LTR|MaLR	-36288	NM_176828	223665	Mm.291713	NM_145472	ENSMUSG00000079002	C030006K11Rik	1110033I13Rik	RIKEN cDNA C030006K11 gene	protein-coding
common_peak2-31742-6-6--0.241956811677302-0.947717972411649	chr9	15306246	15306623	+	0	NA	Intergenic	Intergenic	-3505	NM_133214	170748	Mm.86572	NM_133214	ENSMUSG00000058173	Smco4	Fn5	single-pass membrane protein with coiled-coil domains 4	protein-coding
common_peak1-12361-26-29-0.0210084965499435-0.304710633611964	chr17	59012535	59013420	+	0	NA	Intergenic	RMER15|LTR|ERVL	117821	NM_027001	69239	Mm.246732	NM_027001	ENSMUSG00000024227	2610034M16Rik	AV114557	RIKEN cDNA 2610034M16 gene	protein-coding
common_peak1-14177-98-118-0.306950930122607-0.991547323469582	chr2	143913999	143916434	+	0	NA	Intergenic	Intergenic	56378	NM_207275	403171	Mm.389362	NM_207275	ENSMUSG00000037307	Banf2	4930517K23Rik|Baf-L|Baf-like|Gm115	barrier to autointegration factor 2	protein-coding
common_peak2-28018-17-32--0.826097781153416-1.02859851787301	chr4	47353174	47353813	+	0	NA	Intergenic	L1Md_F3|LINE|L1	-12684	NM_009370	21812	Mm.197552	NM_009370	ENSMUSG00000007613	Tgfbr1	ALK5|AU017191|Alk-5|TbetaR-I|TbetaRI	transforming growth factor, beta receptor I	protein-coding
common_peak2-27444-44-60--0.108844502994351-0.317735460399505	chr3	90051585	90052631	+	0	NA	promoter-TSS (NM_013901)	promoter-TSS (NM_013901)	-6	NM_013901	30791	Mm.294709	NM_013901	ENSMUSG00000052310	Slc39a1	Zip1|Zirtl	solute carrier family 39 (zinc transporter), member 1	protein-coding
unique_peak2-34155-5-5--0.289342836727009-0.909929411522249	chr13	28646074	28646435	+	0	NA	intron (NR_045053, intron 7 of 8)	intron (NR_045053, intron 7 of 8)	156488	NR_105787	102466635		NR_105787	miRBase:MI0021897	Mir6368	mmu-mir-6368	microRNA mir-6368	ncRNA
unique_peak2-34023-8-9--0.316705676939792-1.03275496310833	chr12	108393405	108393809	+	0	NA	Intergenic	Intergenic	-439073	NR_015512	71033	Mm.159404	NR_015512	ENSMUSG00000085820	4933406K04Rik	4930426M03Rik|4930485I22Rik|4933427G14Rik	RIKEN cDNA 4933406K04 gene	ncRNA
common_peak1-10560-13-35--1.39145297080454-2.32006591355687	chr14	20707396	20708159	+	0	NA	intron (NM_001285908, intron 3 of 3)	intron (NM_001285908, intron 3 of 3)	49630	NR_105025	52512	Mm.483998	NR_105025		D14Ertd670e	-	DNA segment, Chr 14, ERATO Doi 670, expressed	ncRNA
common_peak1-14779-8-9--0.316705676939792-1.03275496310833	chr3	89101461	89101927	+	0	NA	Intergenic	Intergenic	-16821	NM_001162425	13636	Mm.15675	NM_010107	ENSMUSG00000027954	Efna1	AI325262|B61|Efl1|Epl1|Eplg1|Lerk1	ephrin A1	protein-coding
common_peak1-8327-27-10-1.53211433225794-2.93261892307636	chr10	43694301	43695288	+	0	NA	intron (NM_172393, intron 9 of 19)	intron (NM_172393, intron 9 of 19)	29858	NM_172393	11630	Mm.292082	NM_172393	ENSMUSG00000019866	Aim1	AI462491|AI463325	absent in melanoma 1	protein-coding
common_peak1-12897-19-9-1.08075923177432-1.37307999835977	chr18	82493964	82494675	+	0	NA	Intergenic	Lx9|LINE|L1	81850	NM_008082	14427	Mm.6219	NM_008082	ENSMUSG00000024553	Galr1	Galnr1	galanin receptor 1	protein-coding
unique_peak2-38205-5-11--1.28934283672701-1.477227296591	chr6	113006697	113007137	+	0	NA	intron (NM_008188, intron 4 of 9)	intron (NM_008188, intron 4 of 9)	10596	NM_008188	14911	Mm.781	NM_008188	ENSMUSG00000030264	Thumpd3	AW556087|Gt(ROSA)26asSor|Gtrosa26as	THUMP domain containing 3	protein-coding
unique_peak1-2245-11-2-1.92373108353046-2.32232533660526	chr15	76880338	76880864	+	0	NA	intron (NM_028010, intron 3 of 4)	CT-rich|Low_complexity|Low_complexity	497	NM_013593	17189	Mm.404074	NM_013593	ENSMUSG00000018893	Mb	AI325109	myoglobin	protein-coding
unique_peak1-978-10-4-1.03448725012141-1.5150158574804	chr11	63783300	63783772	+	0	NA	intron (NM_178379, intron 6 of 6)	intron (NM_178379, intron 6 of 6)	-47750	NM_018805	54710	Mm.274426	NM_018805	ENSMUSG00000070407	Hs3st3b1	3-OST-3B|3OST3B1|3Ost3b|AU041882|AW536289|Hs3st3b|m3-OST-3B	heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1	protein-coding
common_peak1-14483-8-7-0.00522241794757061-1.00793137938329	chr3	5215256	5215723	+	0	NA	intron (NR_045905, intron 1 of 2)	intron (NR_045905, intron 1 of 2)	-3065	NM_030708	80892	Mm.41522	NM_030708	ENSMUSG00000025255	Zfhx4	A930021B15|C130041O22Rik|Zfh-4|Zfh4	zinc finger homeodomain 4	protein-coding
unique_peak2-38072-9-8-0.0196884049619079-1.03275496310833	chr6	50372575	50373023	+	0	NA	intron (NM_001163645, intron 2 of 21)	intron (NM_001163645, intron 2 of 21)	33370	NM_001163645	71720	Mm.44153	NM_027881	ENSMUSG00000029822	Osbpl3	1200014M06Rik|6720421I08Rik|A530055M08|ORP3|OSBP3	oxysterol binding protein-like 3	protein-coding
unique_peak2-34699-2-10--2.37688587490062-2.09384600808989	chr15	27849300	27849679	+	0	NA	intron (NM_001081302, intron 1 of 56)	intron (NM_001081302, intron 1 of 56)	106114	NM_001081302	223435	Mm.485422	NM_001081302	ENSMUSG00000022263	Trio	6720464I07Rik|AA408740|Solo	triple functional domain (PTPRF interacting)	protein-coding
common_peak1-8537-9-5-0.604650905683064-1.21398586181642	chr10	91158008	91158533	+	0	NA	Intergenic	L1MA9|LINE|L1	376660	NR_029812	723955		NR_029812	miRBase:MI0000715	Mir135a-2	Mirn135a-2	microRNA 135a-2	ncRNA
common_peak2-31159-32-28-0.421111024092088-0.694972475810963	chr8	45410063	45411197	+	0	NA	Intergenic	Lx2|LINE|L1	-624932	NM_001081286	14107	Mm.27365	NM_001081286	ENSMUSG00000070047	Fat1	2310038E12Rik|AU023433|Fath|mFat1	FAT tumor suppressor homolog 1 (Drosophila)	protein-coding
common_peak1-12752-27-45--0.532016005161777-0.779916249636879	chr18	57877908	57878826	+	0	NA	intron (NM_029290, intron 6 of 6)	intron (NM_029290, intron 6 of 6)	-80128	NR_045360	70157	Mm.490532	NR_045360		2210409D07Rik	-	RIKEN cDNA 2210409D07 gene	ncRNA
common_peak1-10642-33-38-0.0459353436632801-0.312166972154323	chr14	46821500	46822370	+	0	NA	Intergenic	MTEb|LTR|MaLR	118233	NR_002875	218963	Mm.282093	NR_002875		Gm1821	-	ubiquitin pseudogene	pseudo
common_peak1-8704-9-6-0.382258484346616-1.11707584880836	chr11	86589132	86589660	+	0	NA	intron (NM_026191, intron 13 of 17)	ID_B1|SINE|B4	-18402	NM_001003908	67300	Mm.254588	NM_001003908	ENSMUSG00000047126	Cltc	3110065L21Rik|CHC|R74732	clathrin, heavy polypeptide (Hc)	protein-coding
common_peak2-31131-18-14-0.406028555619833-0.532159081577619	chr8	34761053	34761779	+	0	NA	Intergenic	B2_Mm1a|SINE|B2	-2294	NM_010344	14782	Mm.283573	NM_010344	ENSMUSG00000031584	Gsr	AI325518|D8Ertd238e|Gr-1|Gr1	glutathione reductase	protein-coding
common_peak2-28080-20-21-0.0286431659538957-0.306080386793804	chr4	82507725	82508764	+	0	NA	Intergenic	Intergenic	-2679	NM_026647	68268	Mm.32047	NM_026647	ENSMUSG00000028403	Zdhhc21	9130404H11Rik|AL024349|D130004H04Rik|dep	zinc finger, DHHC domain containing 21	protein-coding
common_peak1-18706-39-40-0.25820924230107-0.498996592876743	chr8	122375997	122377223	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-9595	NM_146219	234796	Mm.86446	NM_146219	ENSMUSG00000031828	Klhl36	-	kelch-like 36	protein-coding
common_peak1-9143-12-6-0.841421063030034-1.58711810488664	chr11	75936056	75936465	+	0	NA	intron (NM_026664, intron 7 of 21)	intron (NM_026664, intron 7 of 21)	56872	NM_026664	68299	Mm.46397	NM_026664	ENSMUSG00000017288	Vps53	2010002A08Rik|2310040I21Rik|3100002B05Rik|Hccs1	vacuolar protein sorting 53 (yeast)	protein-coding
common_peak1-14198-15-11-0.4272022498345-0.503257505534083	chr2	148041438	148042165	+	0	NA	Intergenic	Intergenic	-169096	NM_010446	15376	Mm.938	NM_010446	ENSMUSG00000037025	Foxa2	HNF3-beta|HNF3beta|Hnf-3b|Hnf3b|Tcf-3b|Tcf3b	forkhead box A2	protein-coding
common_peak2-25996-26-20-0.535581669379702-0.738267116931592	chr19	55258267	55259003	+	0	NA	intron (NM_009348, intron 4 of 9)	intron (NM_009348, intron 4 of 9)	3260	NM_009348	21684	Mm.42139	NM_009348	ENSMUSG00000024979	Tectb	Tctnb	tectorin beta	protein-coding
common_peak2-29138-37-42-0.0997283167837208-0.340524918943711	chr5	125080689	125081972	+	0	NA	intron (NM_011596, intron 1 of 19)	intron (NM_011596, intron 1 of 19)	1697	NM_011596	21871	Mm.1158	NM_011596		Atp6v0a2	8430408C20Rik|AI385560|ATP6a2|AW489264|Atp6n1d|Atp6n2|C76904|ISF|J6B7|SHIF|Stv1|TJ6M|TJ6s|Tj6|V-ATPase 116 kDa|V-ATPase a2	ATPase, H+ transporting, lysosomal V0 subunit A2	protein-coding
common_peak1-16539-9-13--0.617741515653384-0.459837087125828	chr5	143270055	143270503	+	0	NA	intron (NM_001122730, intron 16 of 18)	intron (NM_001122730, intron 16 of 18)	-6654	NR_110503	102631757	Mm.373036	NR_110502		LOC102631757	-	uncharacterized LOC102631757	ncRNA
common_peak2-27297-43-31-0.782563185523703-1.77490324686543	chr3	60408325	60409328	+	0	NA	intron (NM_001253708, intron 4 of 8)	intron (NM_001253708, intron 4 of 8)	103652	NM_001253708	56758	Mm.255723	NM_020007	ENSMUSG00000027763	Mbnl1	Mbnl|mKIAA0428	muscleblind-like 1 (Drosophila)	protein-coding
unique_peak1-4188-8-3-1.00522241794757-1.39487600375387	chr2	117599236	117599666	+	0	NA	Intergenic	L1M3|LINE|L1	-48213	NR_040631	73938	Mm.399107	NR_040631	ENSMUSG00000086221	4930412B13Rik	-	RIKEN cDNA 4930412B13 gene	ncRNA
unique_peak2-37820-3-7--1.41398308995928-1.23214870625617	chr5	125433724	125434110	+	0	NA	Intergenic	Intergenic	-49928	NM_028443	73121	Mm.296138	NM_028443	ENSMUSG00000037962	Fam101a	3110032G18Rik|cfm|cfm2	family with sequence similarity 101, member A	protein-coding
common_peak1-8883-38-80--0.768397343586094-2.0567716791101	chr11	46436886	46437784	+	0	NA	intron (NM_001163358, intron 2 of 5)	intron (NM_001163358, intron 2 of 5)	5441	NM_178247	347708	Mm.18119	NM_178247		Dppa1	C77727	developmental pluripotency associated 1	protein-coding
common_peak2-31508-61-87--0.076682288887957-0.321469269268128	chr8	107436099	107437030	+	0	NA	Intergenic	L1_Mus2|LINE|L1	-13596	NM_001163756	234673	Mm.441134	NM_172759	ENSMUSG00000031886	Ces2e	9030624L02Rik|Ces5	carboxylesterase 2E	protein-coding
common_peak2-25796-93-139--0.0182131534386976-0.301813922424374	chr19	36925235	36926692	+	0	NA	intron (NM_001163635, intron 3 of 26)	intron (NM_001163635, intron 3 of 26)	17241	NM_001163635	74493	Mm.249310	NM_001163635	ENSMUSG00000024811	Tnks2	5430432P15Rik|AA517131|AI662480|ARTD6|TNKS-2|Tank2	tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2	protein-coding
unique_peak2-39280-2-7--1.91745425626332-1.45399745587252	chr8	122224886	122225302	+	0	NA	intron (NM_026922, intron 1 of 26)	intron (NM_026922, intron 1 of 26)	1185	NM_026922	69047	Mm.46251	NM_026922	ENSMUSG00000034112	Atp2c2	1810010G06Rik|Spca2|mKIAA0703	ATPase, Ca++ transporting, type 2C, member 2	protein-coding
common_peak2-22157-30-40--0.187876595126211-0.346766333527252	chr12	86946511	86947347	+	0	NA	intron (NM_001205053, intron 1 of 3)	MIRb|SINE|MIR	5961	NM_001205053	81703	Mm.103560	NM_030887	ENSMUSG00000034271	Jdp2	Jundm2|Jundp2|TIF	Jun dimerization protein 2	protein-coding
unique_peak1-3513-16-2-2.53330114154691-3.78760380288747	chr19	16293036	16293845	+	0	NA	intron (NM_008139, intron 1 of 6)	intron (NM_008139, intron 1 of 6)	54852	NR_033228	595139	Mm.405662	NR_033228		E030024N20Rik	9030417F11Rik|Ppia-ps8	peptidylprolyl isomerase A pseudogene 8	pseudo
unique_peak1-5187-12-3-1.64877598508764-2.36932189928148	chr5	31452796	31453380	+	0	NA	intron (NM_008622, intron 2 of 7)	intron (NM_008622, intron 2 of 7)	3465	NM_001294324	17527	Mm.435472	NM_008622	ENSMUSG00000090262	Mpv17	Tg.Mpv17	MpV17 mitochondrial inner membrane protein	protein-coding
common_peak1-12676-36-35-0.309396084725442-0.573175361577103	chr18	37824780	37826122	+	0	NA	intron (NM_033584, intron 1 of 3)	L1Md_T|LINE|L1	-3308	NM_033585	93710	Mm.247203	NM_033585		Pcdhga2	mKIAA0588	protocadherin gamma subfamily A, 2	protein-coding
unique_peak2-38301-6-9--0.75652998450706-1.11707584880836	chr6	136519292	136519598	+	0	NA	intron (NM_019426, intron 5 of 14)	URR1A|DNA|MER1_type	52073	NM_019426	54343	Mm.173271	NM_019426	ENSMUSG00000030213	Atf7ip	2610204M12Rik|AM|Mcaf1	activating transcription factor 7 interacting protein	protein-coding
common_peak2-26557-14-12-0.198776442216552-0.373562084705529	chr2	101885918	101886718	+	0	NA	intron (NM_178886, intron 4 of 5)	intron (NM_178886, intron 4 of 5)	140299	NM_178886	241576	Mm.489740	NM_178886	ENSMUSG00000048058	Ldlrad3	6430500P08|AI194318|Lrad3	low density lipoprotein receptor class A domain containing 3	protein-coding
common_peak2-23368-2-7--1.91745425626332-1.45399745587252	chr15	53675915	53676495	+	0	NA	intron (NM_177225, intron 2 of 4)	intron (NM_177225, intron 2 of 4)	57786	NM_177225	320679	Mm.442455	NM_177225	ENSMUSG00000058656	Samd12	A830094I09Rik	sterile alpha motif domain containing 12	protein-coding
common_peak1-8029-15-10-0.552733131918359-0.604422558181019	chr1	170852533	170853285	+	0	NA	Intergenic	Intergenic	432135	NR_105766	102465178		NR_105766	miRBase:MI0021876	Mir6348	mmu-mir-6348	microRNA mir-6348	ncRNA
unique_peak2-37432-3-10--1.87341470859657-1.75805390616669	chr4	150927763	150928217	+	0	NA	intron (NM_001081557, intron 4 of 23)	intron (NM_001081557, intron 4 of 23)	307887	NM_001081557	100072	Mm.318846	NM_001081557	ENSMUSG00000014592	Camta1	1810059M14Rik|2310058O09Rik|AI316882|AW987475|mKIAA0833	calmodulin binding transcription activator 1	protein-coding
common_peak1-17078-9-9--0.132314688483142-1.03275496310833	chr6	108570384	108570812	+	0	NA	intron (NR_104577, intron 1 of 6)	intron (NR_104577, intron 1 of 6)	2563	NR_040757	75394	Mm.395061	NR_040757	ENSMUSG00000087341	0610040F04Rik	-	RIKEN cDNA 0610040F04 gene	ncRNA
unique_peak1-1449-9-5-0.604650905683064-1.21398586181642	chr12	102469257	102469724	+	0	NA	Intergenic	L1Md_F2|LINE|L1	85671	NR_033653	74947	Mm.488905	NR_033653	ENSMUSG00000092054	Kif4-ps	4930463M05Rik|Kif4b	kinesin family member 4, pseudogene	pseudo
unique_peak2-32772-9-16--0.897849434846119-0.732381977911291	chr1	175624984	175625672	+	0	NA	intron (NM_001162938, intron 5 of 6)	MMTV-int|LTR|ERVK	21517	NM_001162938	100033459	Mm.303377	NM_001162938	ENSMUSG00000066677	Pydc3	9830148g24rik|E430029J22Rik	pyrin domain containing 3	protein-coding
common_peak1-12967-38-37-0.323525145854945-0.611014125894502	chr19	3707529	3708994	+	0	NA	promoter-TSS (NM_028077)	promoter-TSS (NM_028077)	-72	NM_028077	72056	Mm.23780	NM_028077	ENSMUSG00000035372	1810055G02Rik	AI256204	RIKEN cDNA 1810055G02 gene	protein-coding
common_peak1-10027-6-11--1.01956439034085-1.32595962126035	chr13	12461110	12461457	+	0	NA	Intergenic	Intergenic	-26359	NM_144835	217995	Mm.171186	NM_144835	ENSMUSG00000050244	Heatr1	AA517551|B130016L12Rik|BC019693	HEAT repeat containing 1	protein-coding
common_peak2-29920-18-12-0.612479433087259-0.739965416525508	chr6	115494873	115495842	+	0	NA	intron (NM_199033, intron 1 of 11)	intron (NM_199033, intron 1 of 11)	635	NM_199033	381802	Mm.291208	NM_199033	ENSMUSG00000042389	Tsen2	AU067695	tRNA splicing endonuclease 2 homolog (S. cerevisiae)	protein-coding
unique_peak1-4378-15-6-1.20480982849805-1.32521814697968	chr2	158509159	158509881	+	0	NA	intron (NM_001159662, intron 1 of 10)	intron (NM_001159662, intron 1 of 10)	16649	NM_001159662	228852	Mm.150540	NM_153089	ENSMUSG00000037754	Ppp1r16b	ANKRD4|C130078N17Rik|TIMAP|Wdt4	protein phosphatase 1, regulatory (inhibitor) subunit 16B	protein-coding
common_peak1-15613-9-15--0.81038659359578-0.630231561310125	chr4	132884094	132884623	+	0	NA	intron (NM_199306, intron 1 of 15)	intron (NM_199306, intron 1 of 15)	10872	NM_199306	230796	Mm.226576	NM_199306	ENSMUSG00000037622	Wdtc1	Gm695|adipose|adp	WD and tetratricopeptide repeats 1	protein-coding
unique_peak2-34043-7-7--0.200909169701811-0.97990265578305	chr12	112809186	112809594	+	0	NA	Intergenic	Intergenic	3223	NR_045295	100504687	Mm.26072	NR_045295	ENSMUSG00000096995	2810029C07Rik	AU017849	RIKEN cDNA 2810029C07 gene	ncRNA
common_peak2-30521-12-11-0.0638134843664826-0.337263207250336	chr7	66308711	66309308	+	0	NA	Intergenic	Intergenic	-175111	NM_173010	22215	Mm.9002	NM_011668	ENSMUSG00000025326	Ube3a	4732496B02|5830462N02Rik|A130086L21Rik|Hpve6a|mKIAA4216	ubiquitin protein ligase E3A	protein-coding
common_peak1-18260-21-36--0.639964100362715-0.825714541185117	chr8	34154327	34155207	+	0	NA	Intergenic	MTC|LTR|MaLR	-94269	NM_001177589	100042715	Mm.291093	NM_001177589		Gm3985	-	predicted gene 3985	protein-coding
common_peak1-7922-47-50-0.262416082795053-0.538129021504633	chr1	139421576	139423068	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-440710	NR_029795	735252		NR_029795	miRBase:MI0000697	Mir181a-1	Mirn181a-1|Mirn213|miR-213|mmu-mir-213	microRNA 181a-1	ncRNA
unique_peak1-117-11-8-0.338768582809301-1.14218153353838	chr1	59764499	59765055	+	0	NA	intron (NM_018868, intron 12 of 14)	intron (NM_018868, intron 12 of 14)	3125	NR_028521	100217421		NR_028521		Snord11	MBII-95	small nucleolar RNA, C/D box 11	snoRNA
unique_peak2-39423-1-6--2.43441193227435-1.56314192529759	chr9	41906909	41907202	+	0	NA	intron (NM_011436, intron 3 of 47)	intron (NM_011436, intron 3 of 47)	25317	NM_011436	20660	Mm.121920	NM_011436		Sorl1	2900010L19Rik|AI596264|AW261561|LR11|SorLA|gp250|mSorLA	sortilin-related receptor, LDLR class A repeats-containing	protein-coding
unique_peak2-37161-7-12--0.901348887842903-1.31827279259406	chr4	43419645	43420236	+	0	NA	intron (NM_199057, intron 1 of 11)	intron (NM_199057, intron 1 of 11)	566	NM_199057	100213	Mm.235730	NM_199057	ENSMUSG00000035969	Rusc2	AI840675|mKIAA0375	RUN and SH3 domain containing 2	protein-coding
common_peak2-22300-75-70-0.589319872238603-1.99299809546428	chr13	17943601	17945013	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-47376	NM_027118	69562	Mm.193924	NM_027118	ENSMUSG00000041297	Cdk13	2310015O17Rik|Cdc2l5	cyclin-dependent kinase 13	protein-coding
common_peak2-29563-189-244-0.406025549104212-2.81342789445792	chr6	47453596	47455542	+	0	NA	intron (NM_012042, intron 7 of 21)	intron (NM_012042, intron 7 of 21)	50246	NM_012042	26965	Mm.87611	NM_012042	ENSMUSG00000029686	Cul1	-	cullin 1	protein-coding
common_peak2-26241-9-8-0.0196884049619079-1.03275496310833	chr2	29060350	29060828	+	0	NA	intron (NM_133500, intron 3 of 6)	intron (NM_133500, intron 3 of 6)	42971	NM_133501	171171	Mm.442448	NM_133500	ENSMUSG00000035513	Ntng2	2610016D08Rik|Lmnt2	netrin G2	protein-coding
common_peak1-17646-28-16-0.965496278571123-1.60877160026697	chr7	55638280	55639893	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-4810	NM_207539	404240	Mm.357942	NM_207539	ENSMUSG00000050870	Mrgprb8	MrgB8	MAS-related GPR, member B8	protein-coding
unique_peak1-3722-10-3-1.35641534500877-1.75805390616669	chr19	46395122	46395699	+	0	NA	exon (NM_028627, exon 7 of 18)	exon (NM_028627, exon 7 of 18)	6236	NM_028627	73728	Mm.268532	NM_028627	ENSMUSG00000037126	Psd	1110007H17Rik|A930015K15|Efa6|Efa6a|Psdl|mKIAA2011	pleckstrin and Sec7 domain containing	protein-coding
common_peak1-8415-28-75--1.19496839362212-3.94305870513115	chr10	72654806	72655622	+	0	NA	Intergenic	Intergenic	-105761	NR_040646	327768	Mm.417745	NR_040646		A330049N07Rik	-	RIKEN cDNA A330049N07 gene	ncRNA
unique_peak2-37668-6-9--0.75652998450706-1.11707584880836	chr5	92970070	92970584	+	0	NA	Intergenic	(CTTTG)n|Simple_repeat|Simple_repeat	-30236	NM_001033478	384198	Mm.76757	NM_001033478	ENSMUSG00000057068	Fam47e	C730043O17|Gm1381	family with sequence similarity 47, member E	protein-coding
unique_peak2-38620-5-8--0.874305337448166-1.10484139239135	chr7	80689015	80689321	+	0	NA	non-coding (NR_037569, exon 5 of 5)	non-coding (NR_037569, exon 5 of 5)	-2536	NM_001081345	244059	Mm.34539	NM_001081345	ENSMUSG00000078671	Chd2	2810013C04Rik|2810040A01Rik|5630401D06Rik|AI851092|BC029703|CHD-2	chromodomain helicase DNA binding protein 2	protein-coding
unique_peak2-36902-7-10--0.660340788339108-1.12966497611638	chr3	96486595	96487038	+	0	NA	intron (NM_001081139, intron 8 of 12)	intron (NM_001081139, intron 8 of 12)	12762	NM_001081139	213121	Mm.39732	NM_001081139	ENSMUSG00000038354	Ankrd35	4732436F15Rik	ankyrin repeat domain 35	protein-coding
common_peak1-14127-35-51--0.269069459678588-0.449053920623485	chr2	130423431	130425061	+	0	NA	intron (NM_001255993, intron 5 of 6)	intron (NM_001255993, intron 5 of 6)	-15969	NM_009732	11998	Mm.6190	NM_009732	ENSMUSG00000037727	Avp	Vp|Vsp	arginine vasopressin	protein-coding
common_peak1-16226-27-25-0.291106232754144-0.488172498216822	chr5	100429012	100430153	+	0	NA	Intergenic	RMER1B|Other|Other	-21625	NM_001077265	11991	Mm.150231	NM_007516		Hnrnpd	Auf1|Hnrpd	heterogeneous nuclear ribonucleoprotein D	protein-coding
common_peak1-12029-26-30--0.0262972182284127-0.301029995663988	chr17	17234770	17235542	+	0	NA	Intergenic	Lx3_Mus|LINE|L1	-23191	NM_011765	22759	Mm.436633	NM_011765	ENSMUSG00000095990	Zfp97	NGD16-4	zinc finger protein 97	protein-coding
common_peak1-14550-32-30-0.324895708832785-0.556669751231381	chr3	32736786	32737860	+	0	NA	intron (NM_001013024, intron 2 of 20)	B1_Mm|SINE|Alu	20775	NM_001013024	72607	Mm.316153	NM_001013024		Usp13	2700071E21Rik|AI848077|ISOT3|IsoT-3	ubiquitin specific peptidase 13 (isopeptidase T-3)	protein-coding
common_peak2-19583-12-37--1.59915152835595-2.90875693252979	chr1	16518789	16519606	+	0	NA	Intergenic	L1Md_T|LINE|L1	-9814	NM_001111272	29819	Mm.216257	NM_025303	ENSMUSG00000025920	Stau2	-	staufen (RNA binding protein) homolog 2 (Drosophila)	protein-coding
unique_peak1-5916-7-3-0.799090830298189-1.23214870625617	chr6	88960290	88960801	+	0	NA	Intergenic	Intergenic	-85564	NM_175017	232217	Mm.281744	NM_175017	ENSMUSG00000055403	4933427D06Rik	-	RIKEN cDNA 4933427D06 gene	protein-coding
unique_peak2-35114-3-7--1.41398308995928-1.23214870625617	chr16	25042368	25042923	+	0	NA	Intergenic	MIR3|SINE|MIR	-17080	NR_040374	319487	Mm.137341	NR_040374	ENSMUSG00000096960	A230028O05Rik	-	RIKEN cDNA A230028O05 gene	ncRNA
unique_peak1-4382-24-9-1.47128180788035-2.52428350728854	chr2	163099741	163100894	+	0	NA	intron (NM_001098799, intron 2 of 8)	intron (NM_001098799, intron 2 of 8)	49127	NM_001098799	269389	Mm.207709	NM_001098799	ENSMUSG00000074607	Tox2	AI851523|AV026525|BI987407|Gcx1|RxHMG1	TOX high mobility group box family member 2	protein-coding
common_peak1-17362-17-16-0.130833496954699-0.356936432242225	chr7	41598526	41599371	+	0	NA	Intergenic	Intergenic	-2285736	NM_001013810	434171	Mm.60990	NM_001013810	ENSMUSG00000060565	Gm5591	EG434171	predicted gene 5591	protein-coding
common_peak1-7652-38-14-1.66456206369001-4.5819768714626	chr1	74083957	74085198	+	0	NA	intron (NM_001289895, intron 3 of 32)	intron (NM_001289895, intron 3 of 32)	86444	NM_027884	21961	Mm.309975	NM_027884	ENSMUSG00000055322	Tns1	1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns	tensin 1	protein-coding
unique_peak2-34941-2-6--1.72480917832092-1.26211192963361	chr15	89123235	89123644	+	0	NA	intron (NM_001170561, intron 36 of 40)	intron (NM_001170561, intron 36 of 40)	12724	NR_105924	102465981		NR_105924		Mir6959	mmu-mir-6959	microRNA mir-6959	ncRNA
unique_peak2-33654-1-6--2.43441193227435-1.56314192529759	chr11	99659744	99660122	+	0	NA	exon (NM_001099313, exon 2 of 2)	exon (NM_001099313, exon 2 of 2)	-5327	NM_001099311	670464	Mm.473676	NM_001099311		Gm11596	OTTMUSG00000002547	predicted gene 11596	protein-coding
unique_peak1-5840-10-3-1.35641534500877-1.75805390616669	chr6	72937909	72938400	+	0	NA	Intergenic	URR1B|DNA|MER1_type	-29412	NM_001190327	19240	Mm.3532	NM_025284	ENSMUSG00000079523	Tmsb10	Ptmb10|Tb10	thymosin, beta 10	protein-coding
common_peak2-26494-19-33--0.684775514588653-0.884951936461256	chr2	84549934	84551087	+	0	NA	exon (NM_144887, exon 2 of 12)	exon (NM_144887, exon 2 of 12)	4811	NM_144887	228136	Mm.288508	NM_144887	ENSMUSG00000034075	Zdhhc5	1110032A17Rik|AI451382|Zisp	zinc finger, DHHC domain containing 5	protein-coding
common_peak2-31788-13-7-0.778472030637769-0.817533494790411	chr9	32595595	32596014	+	0	NA	Intergenic	Intergenic	92177	NM_001038642	23871	Mm.292415	NM_011808	ENSMUSG00000032035	Ets1	AI196000|AI448617|D230050P06|Ets-1|Tpl1	E26 avian leukemia oncogene 1, 5' domain	protein-coding
common_peak2-30276-4-6--0.830815435910851-0.989110657569874	chr7	16384262	16384547	+	0	NA	Intergenic	IAP-d-int|LTR|ERVK	40624	NM_145710	252830	Mm.25863	NM_145710	ENSMUSG00000041583	Obox6	D17Ertd599e	oocyte specific homeobox 6	protein-coding
common_peak2-27319-33-24-0.687481372750804-1.17890083738705	chr3	65824725	65825394	+	0	NA	Intergenic	L1MC4|LINE|L1	-62912	NM_019937	56706	Mm.175612	NM_019937	ENSMUSG00000027829	Ccnl1	2610030E23Rik|AU018493|Ccnl|ania-6a	cyclin L1	protein-coding
unique_peak2-35437-3-6--1.22133801201688-1.08602067057793	chr17	34958766	34959185	+	0	NA	exon (NM_011413, exon 5 of 41)	exon (NM_011413, exon 5 of 41)	1424	NM_011413	625018	Mm.439678	NM_011413		C4a	Slp	complement component 4A (Rodgers blood group)	protein-coding
common_peak2-28252-13-22--0.745089925419244-0.690311289528838	chr4	125127114	125127900	+	0	NA	Intergenic	Intergenic	-40568	NM_001081097	14807	Mm.40896	NM_001081097	ENSMUSG00000001985	Grik3	9630027E11|GluK3|GluR7-3|Glur-7|Glur7	glutamate receptor, ionotropic, kainate 3	protein-coding
common_peak2-20683-18-9-0.990991056340989-1.23014042908325	chr10	88730521	88731025	+	0	NA	Intergenic	L1MC1|LINE|L1	-10238	NR_102339	320091	Mm.236464	NM_178773	ENSMUSG00000035189	Ano4	A330096O15Rik|Gm65|Tmem16d	anoctamin 4	protein-coding
common_peak2-31692-14-12-0.198776442216552-0.373562084705529	chr8	129234305	129234892	+	0	NA	Intergenic	Intergenic	-117262	NM_001164598	270110	Mm.334918	NM_001164598	ENSMUSG00000051495	Irf2bp2	E130305N23Rik|IRF-2BP2	interferon regulatory factor 2 binding protein 2	protein-coding
common_peak2-20917-26-25-0.22745937401737-0.399869693390336	chr11	5788528	5789226	+	0	NA	Intergenic	Intergenic	9908	NM_022879	17898	Mm.46514	NM_022879	ENSMUSG00000020469	Myl7	MLC-2alpha|MLC2a|MYL2A|Mylc2a|RLC-A	myosin, light polypeptide 7, regulatory	protein-coding
unique_peak2-33937-8-13--0.802132504110034-0.562038191119711	chr12	73286329	73286786	+	0	NA	promoter-TSS (NM_028687)	promoter-TSS (NM_028687)	-541	NM_028687	73936	Mm.475741	NM_028687	ENSMUSG00000021086	Ccdc175	4930403N07Rik	coiled-coil domain containing 175	protein-coding
common_peak2-30685-15-8-0.842239749113344-0.891319708951327	chr7	109613633	109614242	+	0	NA	intron (NM_009103, intron 16 of 18)	intron (NM_009103, intron 16 of 18)	12479	NM_001011782	257947	Mm.376117	NM_001011782	ENSMUSG00000044814	Olfr543	MOR42-2	olfactory receptor 543	protein-coding
common_peak2-24369-13-28--1.0795089644898-1.33403699391683	chr17	6948309	6948964	+	0	NA	intron (NM_009510, intron 7 of 12)	intron (NM_009510, intron 7 of 12)	38457	NM_183368	83672	Mm.442201	NM_031395	ENSMUSG00000041831	Sytl3	A430092N21|Slp3|Slp3-a|Slp3-b|mFLJ00307	synaptotagmin-like 3	protein-coding
common_peak1-10877-24-15-0.793209902767717-1.16796998271032	chr15	75856858	75858236	+	0	NA	Intergenic	(GAA)n|Simple_repeat|Simple_repeat	-12781	NM_134087	105732	Mm.267178	NM_134087	ENSMUSG00000046761	Fam83h	AA409316	family with sequence similarity 83, member H	protein-coding
common_peak2-20902-19-12-0.702247608520594-0.840839978588874	chr11	4308351	4308937	+	0	NA	exon (NM_029458, exon 10 of 11)	exon (NM_029458, exon 10 of 11)	32441	NM_029458	75828	Mm.159592	NM_029458	ENSMUSG00000020419	Hormad2	4930529M09Rik	HORMA domain containing 2	protein-coding
common_peak2-29847-15-18--0.235762762887929-0.326591483156968	chr6	97311632	97312578	+	0	NA	intron (NM_145148, intron 6 of 23)	ID_B1|SINE|B4	-109331	NM_001081157	320502	Mm.68163	NM_001081157	ENSMUSG00000044086	Lmod3	5430424A14Rik	leiomodin 3 (fetal)	protein-coding
common_peak1-16620-78-74-0.578002403664654-1.99876736378458	chr6	108657703	108659503	+	0	NA	Intergenic	Intergenic	-47675	NR_104577	75394	Mm.395061	NR_040757	ENSMUSG00000087341	0610040F04Rik	-	RIKEN cDNA 0610040F04 gene	ncRNA
common_peak1-7763-10-7-0.356415345008769-1.12966497611638	chr1	91823830	91824381	+	0	NA	TTS (NM_010262)	TTS (NM_010262)	3646	NM_010262	14472	Mm.204730	NM_010262		Gbx2	D130058E05Rik|Gbx-2|MMoxA|Stra7	gastrulation brain homeobox 2	protein-coding
unique_peak1-5947-9-4-0.867685311516858-1.36011389749466	chr6	91191229	91191783	+	0	NA	intron (NM_001081437, intron 2 of 16)	intron (NM_001081437, intron 2 of 16)	28748	NM_007992	14115	Mm.249146	NM_007992	ENSMUSG00000064080	Fbln2	5730577E14Rik|FIBL-2	fibulin 2	protein-coding
unique_peak1-3130-23-5-2.13680500378792-3.68490442130631	chr18	36343638	36344419	+	0	NA	intron (NM_001167891, intron 1 of 9)	intron (NM_001167891, intron 1 of 9)	12786	NM_001167891	100042150	Mm.380390	NM_001167891	ENSMUSG00000060275	Nrg2	Don1|NTAK	neuregulin 2	protein-coding
common_peak1-10184-16-11-0.533301141546906-0.58239619684445	chr13	41662021	41662646	+	0	NA	Intergenic	Intergenic	-39252	NM_001163572	621976	Mm.259830	NM_001163572	ENSMUSG00000087370	Tmem170b	EG621976	transmembrane protein 170B	protein-coding
unique_peak1-5762-11-0-3.50869358425161-3.61235994796777	chr6	51466957	51467513	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	-6667	NM_001127349	71982	Mm.294166	NM_028035	ENSMUSG00000038301	Snx10	2410004M09Rik	sorting nexin 10	protein-coding
unique_peak1-550-20-0-4.48807478459119-NA	chr1	192770490	192771341	+	0	NA	TTS (NM_001199020)	TTS (NM_001199020)	18531	NR_037579	52477	Mm.289914	NM_021421	ENSMUSG00000026634	Angel2	2610307I21Rik|5730410O10Rik|AI845692|D1Ertd396e|D1Ertd654e	angel homolog 2 (Drosophila)	protein-coding
common_peak1-12829-10-8-0.186490343566457-1.078512453669	chr18	69919098	69919624	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	-165852	NM_201362	381175	Mm.266831	NM_201362	ENSMUSG00000038903	Ccdc68	BC046343	coiled-coil domain containing 68	protein-coding
common_peak1-18826-26-48--0.686810751956746-1.2112076832151	chr9	9238436	9239378	+	0	NA	5' UTR (NM_027823, exon 1 of 23)	5' UTR (NM_027823, exon 1 of 23)	106	NM_027823	71544	Mm.334955	NM_027823	ENSMUSG00000050730	Arhgap42	9030420J04Rik|BE136619	Rho GTPase activating protein 42	protein-coding
common_peak2-20737-12-4-1.32684789020028-2.04196296489515	chr10	99913318	99913668	+	0	NA	intron (NM_001033332, intron 11 of 12)	intron (NM_001033332, intron 11 of 12)	36488	NM_001033332	237500	Mm.296805	NM_001033332	ENSMUSG00000036676	Tmtc3	9130014E20Rik|B130008E12Rik|mSmile	transmembrane and tetratricopeptide repeat containing 3	protein-coding
unique_peak1-4829-12-6-0.841421063030034-1.58711810488664	chr3	145728424	145729028	+	0	NA	intron (NM_172864, intron 13 of 22)	intron (NM_172864, intron 13 of 22)	42274	NM_172864	242253	Mm.235040	NM_172864	ENSMUSG00000043020	Wdr63	4931433A13Rik	WD repeat domain 63	protein-coding
unique_peak2-38543-5-7--0.704380336005853-1.01466476204226	chr7	49319180	49319596	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-5037	NM_001105056	628444	Mm.469901	NM_001105056	ENSMUSG00000092032	Vmn2r59	EG628444	vomeronasal 2, receptor 59	protein-coding
unique_peak1-7242-14-2-2.31425365963649-3.28500101358144	chr9	77703644	77704315	+	0	NA	Intergenic	RLTR22_Mur|LTR|ERVK	-61193	NM_134255	68801	Mm.430736	NM_134255	ENSMUSG00000032349	Elovl5	1110059L23Rik|AI747313|AU043003|HELO1	ELOVL family member 5, elongation of long chain fatty acids (yeast)	protein-coding
common_peak2-25067-72-129--0.353784000156137-0.987881787277025	chr18	34930732	34932060	+	0	NA	3' UTR (NM_175104, exon 5 of 5)	3' UTR (NM_175104, exon 5 of 5)	-5266	NM_001081256	277250	Mm.277906	NM_029518	ENSMUSG00000038773	Kdm3b	5830462I21Rik|JHDM2B|Jmjd1b|mKIAA1082	KDM3B lysine (K)-specific demethylase 3B	protein-coding
unique_peak2-35644-5-9--1.02630843089322-1.21398586181642	chr17	94834035	94834447	+	0	NA	Intergenic	L1Md_F2|LINE|L1	314991	NM_176917	76781	Mm.139146	NM_176917	ENSMUSG00000055660	Mettl4	2410198H06Rik|A730091E08Rik|AV296509|HsT661	methyltransferase like 4	protein-coding
common_peak2-22491-11-19--0.813234510635749-0.769930178837768	chr13	50417705	50418370	+	0	NA	Intergenic	Intergenic	60853	NR_045474	69211	Mm.259768	NR_045474		2310081J21Rik	-	RIKEN cDNA 2310081J21 gene	ncRNA
unique_peak1-5075-16-13-0.310908720210457-0.417187467413082	chr4	141132024	141133047	+	0	NA	3' UTR (NM_001163256, exon 9 of 9)	3' UTR (NM_001163256, exon 9 of 9)	23304	NM_001163256	74202	Mm.490327	NM_133754	ENSMUSG00000006219	Fblim1	2410043F08Rik|Cal|Fblp1|Gt10|migfilin|migfilin(s)	filamin binding LIM protein 1	protein-coding
unique_peak2-34549-8-7-0.00522241794757061-1.00793137938329	chr14	60736269	60736690	+	0	NA	Intergenic	Intergenic	-30808	NM_015803	50769	Mm.319599	NM_015803	ENSMUSG00000021983	Atp8a2	AI415030|Atpc1b|wl	ATPase, aminophospholipid transporter-like, class I, type 8A, member 2	protein-coding
common_peak1-13549-9-11--0.395349094316936-0.344532117358383	chr2	4476794	4477319	+	0	NA	intron (NM_172475, intron 11 of 22)	PB1D10|SINE|Alu	-3744	NM_001177844	209630	Mm.37932	NM_172475	ENSMUSG00000026657	Frmd4a	2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|OTTMUSG00000010806|mKIAA1294	FERM domain containing 4A	protein-coding
common_peak1-14678-19-66--1.66340186379609-5.60896957578617	chr3	63563328	63564298	+	0	NA	intron (NM_001177733, intron 5 of 23)	intron (NM_001177733, intron 5 of 23)	91100	NM_001177733	269437	Mm.316391	NM_183191	ENSMUSG00000036834	Plch1	BC042549|PLCeta1|Plcl3	phospholipase C, eta 1	protein-coding
unique_peak2-36050-15-37--1.23576276288793-2.15838218998677	chr19	46527944	46529060	+	0	NA	intron (NM_001025391, intron 7 of 11)	intron (NM_001025391, intron 7 of 11)	-47636	NM_053100	93679	Mm.392177	NM_053100	ENSMUSG00000025034	Trim8	AA408830|BB006755|GERP|Rnf27	tripartite motif-containing 8	protein-coding
common_peak2-20827-60-166--1.02941243085352-6.60313058554354	chr10	128492407	128494943	+	0	NA	Intergenic	L1Md_F|LINE|L1	-9558	NM_001085477	544748	Mm.457884	NM_001085477	ENSMUSG00000056853	Olfr765	-	olfactory receptor 765	protein-coding
unique_peak1-981-7-0-2.79909083029819-2.40823996531185	chr11	67000836	67001362	+	0	NA	intron (NM_001039545, intron 22 of 39)	intron (NM_001039545, intron 22 of 39)	-12517	NM_030679	17879	Mm.477065	NM_030679	ENSMUSG00000056328	Myh1	A530084A17Rik|IId|IId/x|MHC-2X/D|MHC2X/D|MYHC-IIX|MdMs|MyHC-IId/x|MyHC-IIx/d|Myhs-f|Myhs-f2|Myhsf2	myosin, heavy polypeptide 1, skeletal muscle, adult	protein-coding
common_peak1-11697-42-73--0.467124037761766-0.920598702816666	chr16	31274486	31275566	+	0	NA	exon (NM_025800, exon 1 of 6)	exon (NM_025800, exon 1 of 6)	337	NM_025800	66849	Mm.291593	NM_025800	ENSMUSG00000047714	Ppp1r2	0610025N14Rik|2310007G06Rik|4930440J04Rik|5430408E15Rik|D16Ertd248e|IPP-2	protein phosphatase 1, regulatory (inhibitor) subunit 2	protein-coding
unique_peak1-1366-15-5-1.4272022498345-1.61682445937017	chr12	33182778	33183506	+	0	NA	Intergenic	L1_Mus1|LINE|L1	119488	NM_001162903	72123	Mm.341352	NM_028111	ENSMUSG00000090946	Ccdc71l	2010109K11Rik|AV375874	coiled-coil domain containing 71 like	protein-coding
common_peak1-8390-53-74--0.0878456780799519-0.31450906201653	chr10	63338246	63339700	+	0	NA	intron (NM_001164519, intron 2 of 12)	intron (NM_001164519, intron 2 of 12)	55170	NM_001164519	216033	Mm.444692	NM_177612	ENSMUSG00000060843	Ctnna3	4930429L08Rik|4933408A16|Catna3|Vr22	catenin (cadherin associated protein), alpha 3	protein-coding
common_peak2-26150-20-13-0.680719862533589-0.809260849721102	chr2	14604839	14605444	+	0	NA	intron (NM_023116, intron 2 of 13)	Lx7|LINE|L1	-37128	NR_028497	625342	Mm.484784	NR_028497		Gm13315	OTTMUSG00000011384	lactate dehydrogenase A pseudogene	pseudo
common_peak2-24707-23-26--0.0331199976543877-0.301029995663988	chr17	46110795	46111597	+	0	NA	Intergenic	GA-rich|Low_complexity|Low_complexity	50916	NM_001110267	22339	Mm.282184	NM_009505	ENSMUSG00000023951	Vegfa	Vegf|Vpf	vascular endothelial growth factor A	protein-coding
common_peak2-27182-6-12--1.13504160776079-1.45089835786865	chr3	36342483	36343069	+	0	NA	Intergenic	Intergenic	31670	NR_105976	102466786		NR_105976	miRBase:MI0022858	Mir7009	mmu-mir-7009	microRNA mir-7009	ncRNA
common_peak2-24397-5-10--1.16381195464315-1.33892459842472	chr17	13759381	13759826	+	0	NA	Intergenic	Intergenic	-12643	NR_045437	72578	Mm.46549	NR_045436	ENSMUSG00000038347	2700054A10Rik	-	RIKEN cDNA 2700054A10 gene	ncRNA
common_peak1-15083-8-6-0.197867495889966-1.03789460276074	chr3	127790662	127791177	+	0	NA	Intergenic	Intergenic	143604	NR_045704	402774	Mm.209170	NR_045704		D030025E07Rik	-	RIKEN cDNA D030025E07 gene	ncRNA
common_peak2-22234-34-53--0.372818975162202-0.578228366855311	chr13	14629807	14630939	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-14880	NM_001081348	94253	Mm.125298	NM_153130	ENSMUSG00000021301	Hecw1	9330116H24Rik|AV273951|E130207I19Rik|Nedl1	HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	protein-coding
unique_peak1-1379-8-0-3.00522241794757-2.70926996097583	chr12	54521397	54521875	+	0	NA	intron (NM_013780, intron 2 of 11)	intron (NM_013780, intron 2 of 11)	171972	NM_013780	27386	Mm.247044	NM_013780	ENSMUSG00000021010	Npas3	4930423H22Rik|bHLHe12	neuronal PAS domain protein 3	protein-coding
common_peak1-15371-25-12-1.16141018720401-1.87883858401928	chr4	59319949	59321067	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	47585	NR_105031	101055769	Mm.421401	NR_105031		LOC101055769	-	uncharacterized LOC101055769	ncRNA
common_peak2-24393-64-100--0.192765081043191-0.467468668135477	chr17	13682592	13684249	+	0	NA	non-coding (NR_045437, exon 4 of 4)	non-coding (NR_045437, exon 4 of 4)	-30902	NR_030763	272667	Mm.444718	NR_030763	ENSMUSG00000079711	Smok4a	4930513D10Rik|Smok2c	sperm motility kinase 4A	pseudo
unique_peak2-33562-7-15--1.20090916970181-0.947446088118041	chr11	84079321	84079925	+	0	NA	intron (NM_133360, intron 22 of 53)	B1F1|SINE|Alu	70683	NM_133360	107476	Mm.31374	NM_133360	ENSMUSG00000020532	Acaca	A530025K05Rik|Acac|Acc1|Gm738	acetyl-Coenzyme A carboxylase alpha	protein-coding
common_peak2-25141-31-26-0.470351168649655-0.720235944639222	chr18	44471950	44472773	+	0	NA	Intergenic	Intergenic	-21367	NM_001033621	58916	Mm.143804	NM_001033621	ENSMUSG00000024471	Myot	5530402I04Rik|Ttid	myotilin	protein-coding
common_peak1-7994-84-76-0.668147518194124-2.64299382100853	chr1	162739420	162741264	+	0	NA	Intergenic	L1MC4|LINE|L1	-17273	NM_013862	29809	Mm.25833	NM_013862	ENSMUSG00000026721	Rabgap1l	5830411O09Rik|8430421H08Rik|9630005B12Rik|AW049894|HHL|Hh1|mKIAA0471	RAB GTPase activating protein 1-like	protein-coding
common_peak1-8788-24-39--0.528718192119646-0.694972475810969	chr11	12464315	12465189	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-99789	NM_001282993	12808	Mm.22847	NM_172496	ENSMUSG00000020173	Cobl	-	cordon-bleu WH2 repeat	protein-coding
unique_peak2-34319-3-8--1.58390809140159-1.39487600375387	chr13	95844149	95844519	+	0	NA	intron (NM_001170669, intron 7 of 18)	intron (NM_001170669, intron 7 of 18)	98035	NM_172590	218460	Mm.33856	NM_172590	ENSMUSG00000042015	Wdr41	B830029I03Rik|MSTP048	WD repeat domain 41	protein-coding
unique_peak2-36680-3-8--1.58390809140159-1.39487600375387	chr3	31056824	31057255	+	0	NA	intron (NM_008770, intron 2 of 2)	intron (NM_008770, intron 2 of 2)	8197	NM_008770	18417	Mm.4425	NM_008770	ENSMUSG00000037625	Cldn11	Claudin-11|Claudin11|Osp|Otm	claudin 11	protein-coding
unique_peak1-736-10-2-1.77145284428761-2.09384600808989	chr10	99123526	99124029	+	0	NA	Intergenic	MER76|LTR|ERVL	-19223	NR_038018	100417125	Mm.391428	NR_038018		Gm18409	-	mediator of cell motility 1 pseudogene	pseudo
common_peak1-10681-8-7-0.00522241794757061-1.00793137938329	chr14	54572379	54572843	+	0	NA	Intergenic	L1Md_T|LINE|L1	286996	NM_001205242	100568452	Mm.213248	NM_001205242		A430107P09Rik	Va10	RIKEN cDNA A430107P09 gene	protein-coding
unique_peak2-37379-4-5--0.608423014574403-0.909929411522249	chr4	138913578	138913977	+	0	NA	intron (NM_146157, intron 5 of 23)	intron (NM_146157, intron 5 of 23)	5275	NM_146157	230866	Mm.394288	NM_146157	ENSMUSG00000078517	Emc1	2700016F22Rik	ER membrane protein complex subunit 1	protein-coding
common_peak2-24790-12-13--0.158578936969966-0.301029995663979	chr17	65657985	65658599	+	0	NA	intron (NM_001289485, intron 14 of 15)	intron (NM_001289485, intron 14 of 15)	231830	NM_001008973	381107	Mm.141275	NM_001008973	ENSMUSG00000045036	Tmem232	E130009J12Rik|Gm940|Tes13-L|Tes13-S	transmembrane protein 232	protein-coding
unique_peak2-39656-2-9--2.23938235115068-1.87199725847353	chr9	106891528	106891892	+	0	NA	intron (NM_153413, intron 21 of 52)	intron (NM_153413, intron 21 of 52)	-97441	NM_029103	74840	Mm.29778	NM_029103	ENSMUSG00000032575	Manf	3230402M22Rik|AA407711|AA408789|AA673178|Armet|D17914|D18Mgi17	mesencephalic astrocyte-derived neurotrophic factor	protein-coding
unique_peak1-6055-8-0-3.00522241794757-2.70926996097583	chr6	115542329	115542845	+	0	NA	promoter-TSS (NM_001101431)	promoter-TSS (NM_001101431)	7	NM_001101431	70291	Mm.133694	NM_001101431		Mkrn2os	2510049J12Rik	makorin, ring finger protein 2, opposite strand	protein-coding
common_peak1-10026-16-22--0.405298313788951-0.440610794044987	chr13	12257423	12258299	+	0	NA	Intergenic	L1MA4|LINE|L1	20894	NR_045170	328186	Mm.188154	NM_183202		Gm10336	B330003H21|ENSMUSG00000071543	predicted gene 10336	ncRNA
common_peak1-14813-12-24--0.995080204687086-1.0220094258199	chr3	90490462	90491178	+	0	NA	Intergenic	Intergenic	8823	NM_001281852	20202	Mm.2128	NM_009114	ENSMUSG00000056071	S100a9	60B8Ag|AW546964|BEE22|Cagb|GAGB|L1Ag|MRP14|p14	S100 calcium binding protein A9 (calgranulin B)	protein-coding
common_peak2-24993-93-117-0.228426814144427-0.676992626992234	chr18	10725512	10726973	+	0	NA	5' UTR (NM_144860, exon 1 of 21)	5' UTR (NM_144860, exon 1 of 21)	619	NM_144860	225164	Mm.21500	NM_144860	ENSMUSG00000024294	Mib1	DIP-1|E430019M12Rik|Mib|mKIAA1323	mindbomb homolog 1 (Drosophila)	protein-coding
common_peak2-23156-25-31--0.138150094654894-0.315509160416417	chr14	120911121	120912118	+	0	NA	Intergenic	Intergenic	33936	NM_029519	76108	Mm.261448	NM_029519	ENSMUSG00000051615	Rap2a	5830461H18Rik	RAS related protein 2a	protein-coding
unique_peak2-32936-4-8--1.19338551529556-1.21878474469819	chr10	34512404	34512921	+	0	NA	Intergenic	Intergenic	309456	NM_010237	14302	Mm.332432	NM_010237	ENSMUSG00000019779	Frk	BSK|BSK/IYK|C85044|GTK|RAK	fyn-related kinase	protein-coding
common_peak2-23642-4-7--1.02346051385325-1.09384600808989	chr15	83575362	83575823	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-20123	NM_022723	64706	Mm.40393	NM_022723	ENSMUSG00000016763	Scube1	7330410C13Rik|A630023E24Rik	signal peptide, CUB domain, EGF-like 1	protein-coding
unique_peak1-3697-15-7-1.01216475055566-1.08658567012551	chr19	43884689	43885330	+	0	NA	exon (NM_013806, exon 12 of 32)	exon (NM_013806, exon 12 of 32)	28211	NM_013806	12780	Mm.39054	NM_013806	ENSMUSG00000025194	Abcc2	AI173996|Abc30|Cmoat|Mrp2|cMRP	ATP-binding cassette, sub-family C (CFTR/MRP), member 2	protein-coding
unique_peak2-35195-5-17--1.87430533744817-1.80287260729378	chr16	59600534	59600991	+	0	NA	Intergenic	CpG	-36009	NR_040564	75145	Mm.399348	NR_040564		4930547E14Rik	-	RIKEN cDNA 4930547E14 gene	ncRNA
common_peak1-12873-52-18-1.86033247682211-7.22795699334069	chr18	76200131	76201609	+	0	NA	intron (NM_145356, intron 3 of 4)	intron (NM_145356, intron 3 of 4)	57255	NR_045365	73009	Mm.443541	NR_045365		2900057B20Rik	-	RIKEN cDNA 2900057B20 gene	ncRNA
common_peak2-32125-25-20-0.469532482566345-0.662033714151238	chr9	105395311	105396185	+	0	NA	intron (NM_001253831, intron 1 of 26)	intron (NM_001253831, intron 1 of 26)	1715	NM_175025	235574	Mm.326247	NM_175025	ENSMUSG00000032570	Atp2c1	1700121J11Rik|ATP2C1A|AW061228|BCPM|D930003G21Rik|HHD|SPCA|pmr1	ATPase, Ca++-sequestering	protein-coding
unique_peak1-2935-7-5-0.214128329577033-1.01466476204226	chr17	56277944	56278463	+	0	NA	intron (NM_001130456, intron 1 of 16)	intron (NM_001130456, intron 1 of 16)	1563	NM_001130456	20359	Mm.8029	NM_013662	ENSMUSG00000001227	Sema6b	Sema|Seman|VIb|semaZ	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B	protein-coding
common_peak1-16755-17-15-0.218296338205038-0.403453972741633	chr6	34475267	34476050	+	0	NA	Intergenic	Intergenic	49302	NM_007563	12183	Mm.282863	NM_007563	ENSMUSG00000038871	Bpgm	AI323730|AL022789|C86192	2,3-bisphosphoglycerate mutase	protein-coding
common_peak1-15050-44-31-0.821892834568535-1.99427374707394	chr3	122508932	122510697	+	0	NA	intron (NM_153422, intron 11 of 20)	MTA_Mm|LTR|MaLR	-4916	NR_045168	71647	Mm.449992	NR_045168		4930447N08Rik	-	RIKEN cDNA 4930447N08 gene	ncRNA
common_peak1-10907-67-108--0.223772841993931-0.544331390712582	chr15	3978886	3979936	+	0	NA	intron (NM_024188, intron 1 of 16)	A-rich|Low_complexity|Low_complexity	-2005	NR_028266	414066	Mm.394461	NR_028266		BC037032	-	cDNA Sequence BC037032	ncRNA
common_peak1-15363-75-52-1.01114653718009-4.51889462061216	chr4	57956419	57957807	+	0	NA	intron (NM_011660, intron 4 of 4)	intron (NM_011660, intron 4 of 4)	12170	NM_011660	22166	Mm.260618	NM_011660	ENSMUSG00000028367	Txn1	ADF|AW550880|Trx1|Txn	thioredoxin 1	protein-coding
common_peak1-17054-9-9--0.132314688483142-1.03275496310833	chr6	97311938	97312481	+	0	NA	intron (NM_145148, intron 6 of 23)	GA-rich|Low_complexity|Low_complexity	-109435	NM_001081157	320502	Mm.68163	NM_001081157	ENSMUSG00000044086	Lmod3	5430424A14Rik	leiomodin 3 (fetal)	protein-coding
common_peak1-11779-16-7-1.11826364226806-1.23399803405144	chr16	45841350	45842102	+	0	NA	intron (NM_153412, intron 1 of 17)	MIR3|SINE|MIR	2765	NM_153412	208177	Mm.211477	NM_153412	ENSMUSG00000033149	Phldb2	AV253284|C820004H04Rik|LL5b|LL5beta	pleckstrin homology-like domain, family B, member 2	protein-coding
unique_peak2-35151-10-21--1.10301627362853-1.16735254179725	chr16	32746036	32746685	+	0	NA	intron (NM_080457, intron 1 of 26)	intron (NM_080457, intron 1 of 26)	10388	NM_080457	140474	Mm.214599	NM_080457	ENSMUSG00000079620	Muc4	4933405I11Rik|Asgp	mucin 4	protein-coding
unique_peak2-34903-2-8--2.08737925770563-1.65811743852845	chr15	82364821	82365257	+	0	NA	Intergenic	MMTV-int|LTR|ERVK	-20489	NM_201360	380997	Mm.482248	NM_201360	ENSMUSG00000096852	Cyp2d12	9030605E09Rik	cytochrome P450, family 2, subfamily d, polypeptide 12	protein-coding
common_peak2-25559-11-12--0.191746133889479-0.310474156842889	chr19	6362881	6363470	+	0	NA	promoter-TSS (NM_011750)	promoter-TSS (NM_011750)	-515	NM_011750	22668	Mm.256422	NM_011750	ENSMUSG00000024949	Sf1	BBP|MZFM|WBP4|Zfp162	splicing factor 1	protein-coding
common_peak2-30605-11-10-0.0492619656143161-0.31137425193576	chr7	84018090	84018629	+	0	NA	intron (NM_001199224, intron 21 of 22)	intron (NM_001199224, intron 21 of 22)	643586	NM_001199224	244071	Mm.322829	NM_172902	ENSMUSG00000025754	Agbl1	Ccp4|D430020F16|EG244071|Nna1-l1	ATP/GTP binding protein-like 1	protein-coding
common_peak2-26695-9-5-0.604650905683064-1.21398586181642	chr2	126947814	126948206	+	0	NA	intron (NM_144818, intron 7 of 17)	intron (NM_144818, intron 7 of 17)	11680	NM_144818	215387	Mm.29786	NM_144818	ENSMUSG00000034906	Ncaph	A730011O11Rik|Brrn1|HCAP-H|mKIAA0074	non-SMC condensin I complex, subunit H	protein-coding
common_peak2-25738-16-9-0.796335547380699-0.844317084070804	chr19	24423116	24423545	+	0	NA	intron (NM_008846, intron 12 of 14)	(CA)n|Simple_repeat|Simple_repeat	-68254	NM_008044	14297	Mm.7319	NM_008044	ENSMUSG00000059363	Fxn	FA|FARR|Frda|X25	frataxin	protein-coding
unique_peak1-6310-10-6-0.549060422951165-1.21398586181642	chr7	43671156	43671769	+	0	NA	Intergenic	Intergenic	2848442	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak1-15194-76-169--0.64744655027442-3.13525688026429	chr3	158035650	158037363	+	0	NA	intron (NM_001291453, intron 3 of 25)	Lx4A|LINE|L1	188679	NM_001291453	242274	Mm.132162	NM_001081358	ENSMUSG00000028176	Lrrc7	AK122498|densin|mKIAA1365	leucine rich repeat containing 7	protein-coding
unique_peak1-6389-12-7-0.648775985087639-0.697979855752659	chr7	78913005	78913522	+	0	NA	Intergenic	Intergenic	538218	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding
common_peak2-32415-11-18--0.739233929191972-0.671582559449692	chrX	160501883	160502432	+	0	NA	Intergenic	RLTR19-int|LTR|ERVK	11824	NM_009173	20438	Mm.37215	NM_009173	ENSMUSG00000040749	Siah1b	AA960570|Sinh1b	seven in absentia 1B	protein-coding
common_peak2-22815-67-115--0.313569512344577-0.807261277699032	chr14	16364257	16366157	+	0	NA	Intergenic	Intergenic	-93706	NM_146052	218763	Mm.138039	NM_146052	ENSMUSG00000045201	Lrrc3b	BC019794|LRP15	leucine rich repeat containing 3B	protein-coding
common_peak1-13440-42-28-0.884348332739612-2.12244165266811	chr19	55732477	55733711	+	0	NA	intron (NR_045318, intron 2 of 3)	intron (NR_045318, intron 2 of 3)	43600	NR_045318	77594	Mm.329924	NR_045318	ENSMUSG00000097632	4930552P12Rik	-	RIKEN cDNA 4930552P12 gene	ncRNA
common_peak2-20937-31-24-0.581382481038399-0.907273387067398	chr11	8634905	8635829	+	0	NA	Intergenic	MMETn-int|LTR|ERVK	-70829	NM_001083587	319939	Mm.337820	NM_001083587	ENSMUSG00000020422	Tns3	BC023928|F830010I22Rik|TEM6|Tens1	tensin 3	protein-coding
unique_peak2-36859-2-9--2.23938235115068-1.87199725847353	chr3	89730631	89731133	+	0	NA	Intergenic	T-rich|Low_complexity|Low_complexity	-13798	NM_010559	16194	Mm.2856	NM_010559	ENSMUSG00000027947	Il6ra	CD126|IL-6R|Il6r	interleukin 6 receptor, alpha	protein-coding
common_peak2-21475-40-59--0.247914912857421-0.427481819178421	chr11	87748870	87750345	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	-21102	NM_146412	258407	Mm.271337	NM_146412	ENSMUSG00000060787	Olfr464	MOR240-2	olfactory receptor 464	protein-coding
common_peak1-13579-22-17-0.477359103645092-0.633951497070961	chr2	13413589	13414513	+	0	NA	promoter-TSS (NM_001081084)	promoter-TSS (NM_001081084)	-548	NM_001081084	65969	Mm.313915	NM_001081084	ENSMUSG00000026726	Cubn	AA408369|AL022750|D2Wsu88e	cubilin (intrinsic factor-cobalamin receptor)	protein-coding
unique_peak2-34432-6-8--0.60452689106201-1.03789460276074	chr14	20836755	20837103	+	0	NA	Intergenic	Lx7|LINE|L1	-40458	NM_001285909	14702	Mm.41737	NM_010315	ENSMUSG00000043004	Gng2	82	guanine nucleotide binding protein (G protein), gamma 2	protein-coding
common_peak1-7905-11-8-0.338768582809301-1.14218153353838	chr1	135844334	135844839	+	0	NA	Intergenic	L1MA4A|LINE|L1	-26608	NM_054077	116847	Mm.214514	NM_054077	ENSMUSG00000041577	Prelp	7330409J17Rik|SLRR2A	proline arginine-rich end leucine-rich repeat	protein-coding
unique_peak2-36225-1-5--2.2120195109379-1.32905871926422	chr2	35619692	35620061	+	0	NA	intron (NM_029774, intron 9 of 9)	intron (NM_029774, intron 9 of 9)	-54834	NR_040618	77665	Mm.400558	NR_040618	ENSMUSG00000086449	9030204H09Rik	-	RIKEN cDNA 9030204H09 gene	ncRNA
common_peak2-22898-20-22--0.03548717146582-0.301029995663994	chr14	33340167	33340993	+	0	NA	intron (NM_001081221, intron 5 of 20)	intron (NM_001081221, intron 5 of 20)	13873	NM_001081221	319955	Mm.318310	NM_177043	ENSMUSG00000054051	Ercc6	4732403I04|C130058G22Rik|CSB	excision repair cross-complementing rodent repair deficiency, complementation group 6	protein-coding
common_peak1-15046-51-63-0.074923825602573-0.327760028623774	chr3	122292671	122294062	+	0	NA	intron (NM_001114665, intron 1 of 15)	MLT2D|LTR|ERVL	29266	NM_001114665	214459	Mm.209491	NM_153118	ENSMUSG00000039735	Fnbp1l	2610318I01Rik|AW548221|TOCA1|toca-1	formin binding protein 1-like	protein-coding
unique_peak2-39863-6-10--0.894033508256995-1.21398586181642	chrX	73476343	73476702	+	0	NA	Intergenic	Intergenic	-33123	NM_001013760	238829	Mm.292319	NM_001013760	ENSMUSG00000071738	Gm4937	EG238829	predicted gene 4937	protein-coding
unique_peak1-2495-8-2-1.42025991722641-1.65811743852845	chr16	10980727	10981244	+	0	NA	intron (NM_019980, intron 1 of 3)	intron (NM_019980, intron 1 of 3)	12229	NM_019980	56722	Mm.294753	NM_019980	ENSMUSG00000022500	Litaf	3222402J11Rik|C85531|N4WBP3|TBX1	LPS-induced TN factor	protein-coding
common_peak2-25116-38-61--0.382743651088345-0.638510577194958	chr18	38249190	38250683	+	0	NA	Intergenic	Intergenic	-91313	NM_001205336	106952	Mm.247642	NM_139206	ENSMUSG00000024451	Arap3	Centd3|Drag1|E030006K04Rik|cnt-d3	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3	protein-coding
common_peak1-12329-23-16-0.634304663258741-0.82304638657543	chr17	49428283	49429279	+	0	NA	Intergenic	RMER19B|LTR|ERVK	23504	NR_033486	100415784	Mm.400421	NR_033486		Gm17830	-	predicted gene, 17830	ncRNA
common_peak2-24047-77-65-0.740132460197544-2.84218426594949	chr16	25406998	25409193	+	0	NA	intron (NM_175165, intron 4 of 5)	intron (NM_175165, intron 4 of 5)	121192	NM_175165	71338	Mm.126851	NM_175165	ENSMUSG00000048399	Tprg	5430420C16Rik|Tprg1	transformation related protein 63 regulated	protein-coding
unique_peak1-2387-7-0-2.79909083029819-2.40823996531185	chr15	97408313	97408680	+	0	NA	Intergenic	Intergenic	127757	NM_028003	71919	Mm.12255	NM_028003	ENSMUSG00000022466	Rpap3	2310042P20Rik|D15Ertd682e	RNA polymerase II associated protein 3	protein-coding
common_peak2-31247-13-9-0.456543935750406-0.53895475198017	chr8	70543715	70544132	+	0	NA	Intergenic	Intergenic	-45450	NM_177698	234353	Mm.32525	NM_027626	ENSMUSG00000030465	Psd3	4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D	pleckstrin and Sec7 domain containing 3	protein-coding
common_peak1-10836-87-74-0.766818415285289-3.47413586658952	chr14	105176150	105177829	+	0	NA	intron (NR_015593, intron 2 of 5)	intron (NR_015593, intron 2 of 5)	138625	NR_015593	320249	Mm.320725	NR_015593		D130009I18Rik	-	RIKEN cDNA D130009I18 gene	ncRNA
common_peak1-19277-17-23--0.366666162516118-0.383878263347744	chr9	118506141	118506959	+	0	NA	Intergenic	Tigger5|DNA|MER2_type	-9277	NM_133721	104099	Mm.335520	NM_133721	ENSMUSG00000039115	Itga9	(alpha)9|2610002H11Rik|6720458D17Rik|AI461869|D130073C02|D9Ertd428e	integrin alpha 9	protein-coding
common_peak1-16997-27-25-0.291106232754144-0.488172498216822	chr6	88902020	88903052	+	0	NA	Intergenic	L1M4b|LINE|L1	50291	NM_011906	24100	Mm.284480	NM_011906	ENSMUSG00000002871	Tpra1	40kDa|Gpr175|Tpra40	transmembrane protein, adipocyte asscociated 1	protein-coding
unique_peak1-5231-9-0-3.18961340640422-3.01029995663981	chr5	41906914	41907424	+	0	NA	Intergenic	L1M4|LINE|L1	192225	NM_027295	100972	Mm.41555	NM_027295	ENSMUSG00000029128	Rab28	2700023P08Rik|AW496496	RAB28, member RAS oncogene family	protein-coding
common_peak1-9046-31-33-0.137775829562784-0.350690697593776	chr11	65806873	65808033	+	0	NA	intron (NM_001099633, intron 38 of 68)	intron (NM_001099633, intron 38 of 68)	174600	NM_001099633	237806	Mm.264210	NM_001099633	ENSMUSG00000056752	Dnah9	9030022M04|A230091C01|C230051G16|D11Ertd686e|Dnahc9|mKIAA0357	dynein, axonemal, heavy chain 9	protein-coding
common_peak1-10599-19-16-0.315224485411347-0.448200956659575	chr14	31435593	31436346	+	0	NA	intron (NM_011103, intron 1 of 17)	intron (NM_011103, intron 1 of 17)	3425	NM_011103	18753	Mm.2314	NM_011103	ENSMUSG00000021948	Prkcd	AI385711|D14Ertd420e|PKC[d]|PKCdelta|Pkcd	protein kinase C, delta	protein-coding
common_peak2-20698-58-135--0.791512906359842-3.52050052979984	chr10	93309566	93311463	+	0	NA	3' UTR (NM_183199, exon 4 of 4)	3' UTR (NM_183199, exon 4 of 4)	16214	NM_001206851	327799	Mm.491598	NM_183199	ENSMUSG00000020020	Usp44	E430004F17Rik	ubiquitin specific peptidase 44	protein-coding
common_peak2-27900-14-23--0.685746340363512-0.669502273696327	chr4	151044022	151044737	+	0	NA	intron (NM_001081557, intron 3 of 23)	intron (NM_001081557, intron 3 of 23)	191498	NM_001081557	100072	Mm.318846	NM_001081557	ENSMUSG00000014592	Camta1	1810059M14Rik|2310058O09Rik|AI316882|AW987475|mKIAA0833	calmodulin binding transcription activator 1	protein-coding
common_peak1-8475-17-42--1.20796841649706-2.23152841032562	chr10	80385863	80386671	+	0	NA	Intergenic	Intergenic	-5277	NM_010722	16907	Mm.7362	NM_010722	ENSMUSG00000062075	Lmnb2	-	lamin B2	protein-coding
unique_peak2-33994-3-6--1.22133801201688-1.08602067057793	chr12	87141857	87142211	+	0	NA	intron (NM_145447, intron 5 of 9)	intron (NM_145447, intron 5 of 9)	23461	NM_021446	58520	Mm.143795	NM_021446	ENSMUSG00000021252	0610007P14Rik	1190004E09Rik|AU019315|C77855|ORF11	RIKEN cDNA 0610007P14 gene	protein-coding
unique_peak1-1156-21-9-1.24756117037887-1.83731222263754	chr11	98944445	98945498	+	0	NA	intron (NM_172564, intron 2 of 12)	intron (NM_172564, intron 2 of 12)	5649	NM_172564	217169	Mm.262067	NM_172564	ENSMUSG00000017607	Tns4	9930017A07Rik|AA589547|AU016405|Cten	tensin 4	protein-coding
common_peak1-11974-10-25--1.34402437313232-1.74319850844462	chr17	6948414	6948803	+	0	NA	intron (NM_009510, intron 7 of 12)	intron (NM_009510, intron 7 of 12)	38429	NM_183368	83672	Mm.442201	NM_031395	ENSMUSG00000041831	Sytl3	A430092N21|Slp3|Slp3-a|Slp3-b|mFLJ00307	synaptotagmin-like 3	protein-coding
common_peak2-23587-15-25--0.688274967585436-0.73354163167379	chr15	80083414	80084370	+	0	NA	TTS (NM_178719)	TTS (NM_178719)	-1722	NM_001287180	11911	Mm.641	NM_009716	ENSMUSG00000042406	Atf4	Atf-4|C/ATF|CREB2|TAXREB67	activating transcription factor 4	protein-coding
common_peak2-21470-1-5--2.2120195109379-1.32905871926422	chr11	87462643	87463125	+	0	NA	intron (NM_001045527, intron 5 of 5)	L2a|LINE|L2	-13705	NM_172448	207742	Mm.440230	NM_172448	ENSMUSG00000034177	Rnf43	4732452J19Rik	ring finger protein 43	protein-coding
common_peak2-27104-75-115--0.118914003384287-0.363644558008837	chr3	5575282	5576951	+	0	NA	5' UTR (NM_008994, exon 1 of 6)	5' UTR (NM_008994, exon 1 of 6)	132	NM_001163301	19302	Mm.132336	NM_008994	ENSMUSG00000040374	Pex2	D3Ertd138e|PAF-1|PMP35|Pxmp3	peroxisomal biogenesis factor 2	protein-coding
common_peak2-21305-33-44--0.160515533804146-0.342407020751092	chr11	73177170	73177805	+	0	NA	Intergenic	L1Md_A|LINE|L1	-7261	NM_001172686	258924	Mm.236410	NM_146922	ENSMUSG00000063881	Olfr376	MOR135-12	olfactory receptor 376	protein-coding
common_peak1-18705-11-14--0.398197011356905-0.379391706698377	chr8	122280940	122281425	+	0	NA	intron (NM_026922, intron 26 of 26)	intron (NM_026922, intron 26 of 26)	21134	NM_028883	74347	Mm.358759	NM_028883	ENSMUSG00000034105	Tldc1	4632415K11Rik|Kiaa1609	TBC/LysM associated domain containing 1	protein-coding
common_peak2-26899-9-8-0.0196884049619079-1.03275496310833	chr2	158361675	158362250	+	0	NA	intron (NM_001145015, intron 6 of 14)	(TG)n|Simple_repeat|Simple_repeat	23430	NM_001145015	545481	Mm.125371	NM_001145015	ENSMUSG00000074625	Arhgap40	C20orf95|Gm14203|OTTMUSG00000015933	Rho GTPase activating protein 40	protein-coding
common_peak1-18256-21-10-1.11005764662894-1.59083646988122	chr8	33906698	33907526	+	0	NA	Intergenic	B2_Mm1a|SINE|B2	153386	NM_001177589	100042715	Mm.291093	NM_001177589		Gm3985	-	predicted gene 3985	protein-coding
unique_peak1-7163-11-7-0.508693584251613-1.21681515183528	chr9	58705956	58706474	+	0	NA	intron (NM_001081192, intron 6 of 7)	MLT1A|LTR|MaLR	34896	NM_001081192	330953	Mm.151967	NM_001081192	ENSMUSG00000032338	Hcn4	Bcng3|Hcn3	hyperpolarization-activated, cyclic nucleotide-gated K+ 4	protein-coding
common_peak1-18258-8-15--0.994777582052429-0.771068449301683	chr8	33929964	33930367	+	0	NA	Intergenic	Intergenic	130333	NM_001177589	100042715	Mm.291093	NM_001177589		Gm3985	-	predicted gene 3985	protein-coding
common_peak2-25494-21-10-1.11005764662894-1.59083646988122	chr19	5272505	5273065	+	0	NA	exon (NM_153129, exon 1 of 24)	exon (NM_153129, exon 1 of 24)	334	NM_153129	107975	Mm.234923	NM_153129	ENSMUSG00000024855	Pacs1	AI325977	phosphofurin acidic cluster sorting protein 1	protein-coding
common_peak1-16144-11-11--0.0762689164695427-0.301029995663976	chr5	74068110	74068594	+	0	NA	intron (NM_178387, intron 11 of 12)	intron (NM_178387, intron 11 of 12)	25733	NM_178387	73472	Mm.87067	NM_178387	ENSMUSG00000029155	Spata18	1700067I02Rik	spermatogenesis associated 18	protein-coding
unique_peak2-34797-3-8--1.58390809140159-1.39487600375387	chr15	71890198	71890725	+	0	NA	Intergenic	Intergenic	-25804	NM_027174	69700	Mm.322500	NM_027174		Col22a1	2310067L16Rik|C80743	collagen, type XXII, alpha 1	protein-coding
unique_peak1-4437-7-2-1.21412832957703-1.45399745587252	chr2	169664516	169664972	+	0	NA	intron (NM_080455, intron 1 of 1)	PB1D7|SINE|Alu	205598	NM_080455	228911	Mm.315789	NM_080455	ENSMUSG00000047907	Tshz2	2900073F20Rik|B830045G17|Mtsh2|Sdccag33l|Tsh2|Zfp218|mKIAA4248|teashirt2	teashirt zinc finger family member 2	protein-coding
unique_peak1-1581-11-1-2.50869358425161-2.83420869758413	chr13	32960322	32960808	+	0	NA	Intergenic	Lx7|LINE|L1	-17511	NM_025429	66222	Mm.20144	NM_025429	ENSMUSG00000044734	Serpinb1a	1190005M04Rik|AI325983|EI|EIA|ELANH2|LEI|M/NEI|MNEI|PI2	serine (or cysteine) peptidase inhibitor, clade B, member 1a	protein-coding
common_peak1-10582-38-37-0.323525145854945-0.611014125894502	chr14	26669153	26670419	+	0	NA	intron (NM_013469, intron 1 of 14)	intron (NM_013469, intron 1 of 14)	8145	NM_013469	11744	Mm.294083	NM_013469	ENSMUSG00000021866	Anxa11	A830099O17Rik|Anx11	annexin A11	protein-coding
common_peak2-23674-32-30-0.324895708832785-0.556669751231381	chr15	85672472	85673323	+	0	NA	intron (NM_001033337, intron 6 of 13)	intron (NM_001033337, intron 6 of 13)	10163	NM_001033337	239570	Mm.151748	NM_001033337	ENSMUSG00000035944	Ttc38	9030019H09	tetratricopeptide repeat domain 38	protein-coding
common_peak1-10427-46-36-0.688542577619851-1.61783625824857	chr13	100669148	100670559	+	0	NA	intron (NM_013732, intron 2 of 2)	intron (NM_013732, intron 2 of 2)	785	NM_013732	27220	Mm.75498	NM_013732	ENSMUSG00000021647	Cartpt	Cart	CART prepropeptide	protein-coding
common_peak1-16105-59-71-0.155438999430266-0.417582018066374	chr5	65390394	65391620	+	0	NA	intron (NM_026667, intron 3 of 13)	intron (NM_026667, intron 3 of 13)	29450	NR_030577	100124451		NR_030577	miRBase:MI0005518	Mir574	Mirn574|mmu-mir-574	microRNA 574	ncRNA
unique_peak1-5083-15-4-1.69023665566829-1.97518968347063	chr4	144950103	144950629	+	0	NA	Intergenic	Intergenic	-45316	NM_009401	21941	Mm.12810	NM_009401	ENSMUSG00000028602	Tnfrsf8	Cd30|D1S166E|Ki|Ki-1	tumor necrosis factor receptor superfamily, member 8	protein-coding
common_peak2-27813-10-7-0.356415345008769-1.12966497611638	chr3	144763558	144764175	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	-1861	NM_178697	229933	Mm.331420	NM_178697	ENSMUSG00000036960	Clca5	4732440A06|AI586120|Clca2	chloride channel calcium activated 5	protein-coding
unique_peak2-39253-3-5--0.998945590680433-0.96108193396963	chr8	117328859	117329285	+	0	NA	intron (NM_019573, intron 8 of 8)	(CA)n|Simple_repeat|Simple_repeat	365520	NM_019573	80707	Mm.440420	NM_019573	ENSMUSG00000004637	Wwox	5330426P09Rik|9030416C10Rik|WOX1	WW domain-containing oxidoreductase	protein-coding
common_peak1-11313-42-44-0.250476231537509-0.522994948702178	chr15	84987182	84988936	+	0	NA	Intergenic	ORR1B1|LTR|MaLR	-1497	NR_040360	100502602	Mm.390830	NR_040360		Gm19277	-	predicted gene, 19277	ncRNA
unique_peak2-35958-12-11-0.0638134843664826-0.337263207250336	chr19	16064062	16064668	+	0	NA	intron (NR_045355, intron 2 of 2)	intron (NR_045355, intron 2 of 2)	4800	NR_045355	100502653	Mm.149980	NR_045355	ENSMUSG00000097557	C130060C02Rik	-	RIKEN cDNA C130060C02 gene	ncRNA
common_peak2-25985-18-14-0.406028555619833-0.532159081577619	chr19	54040588	54041166	+	0	NA	intron (NM_019658, intron 1 of 8)	intron (NM_019658, intron 1 of 8)	21511	NM_019658	56392	Mm.228669	NM_019658	ENSMUSG00000024976	Shoc2	AU017287|Sur8|mKIAA0862	soc-2 (suppressor of clear) homolog (C. elegans)	protein-coding
common_peak1-19103-20-36--0.721378581037757-1.04213512323541	chr9	72661579	72662352	+	0	NA	intron (NM_175485, intron 2 of 19)	intron (NM_175485, intron 2 of 19)	6884	NM_175485	235472	Mm.31696	NM_175485	ENSMUSG00000036030	Prtg	A230098A12Rik|Igdcc5	protogenin homolog (Gallus gallus)	protein-coding
common_peak2-31899-23-21-0.262335885871783-0.416752705545949	chr9	57560890	57561504	+	0	NA	5' UTR (NM_153799, exon 2 of 7)	5' UTR (NM_153799, exon 2 of 7)	4821	NM_153799	353190	Mm.268104	NM_153799		Edc3	AA517853|Lsm16|Yjdc	enhancer of mRNA decapping 3 homolog (S. cerevisiae)	protein-coding
common_peak2-32387-24-13-0.985854980710112-1.52081014994907	chrX	126777623	126778186	+	0	NA	intron (NM_172493, intron 23 of 26)	intron (NM_172493, intron 23 of 26)	493626	NM_172493	54004	Mm.10763	NM_017398	ENSMUSG00000034480	Diap2	Dia3|Diaph2|Drf2|E430022I22Rik	diaphanous homolog 2 (Drosophila)	protein-coding
unique_peak1-1277-17-8-1.04837133676273-1.30305656033811	chr11	118193277	118194131	+	0	NA	TTS (NM_021440)	TTS (NM_021440)	10144	NM_021440	58251	Mm.439815	NM_021440	ENSMUSG00000076433	BC100451	Ddc8|FS39	cDNA sequence BC100451	protein-coding
unique_peak1-2489-8-6-0.197867495889966-1.03789460276074	chr16	10301696	10302163	+	0	NA	intron (NM_007929, intron 1 of 4)	RMER5|LTR|ERV1	12132	NM_007929	13731	Mm.246009	NM_007929	ENSMUSG00000022505	Emp2	XMP	epithelial membrane protein 2	protein-coding
common_peak1-16110-21-25--0.130950452874856-0.305461879681376	chr5	65492902	65493990	+	0	NA	Intergenic	Intergenic	-29024	NM_175174	71778	Mm.10281	NM_175174	ENSMUSG00000054920	Klhl5	1300013C10Rik	kelch-like 5	protein-coding
unique_peak2-33036-15-32--1.0322293688028-1.48160942223867	chr10	70096819	70098030	+	0	NA	intron (NR_045291, intron 1 of 5)	(GGA)n|Simple_repeat|Simple_repeat	17249	NR_045291	319646	Mm.483039	NR_045291	ENSMUSG00000037747	D630013N20Rik	-	RIKEN cDNA D630013N20 gene	ncRNA
common_peak2-30314-23-21-0.262335885871783-0.416752705545949	chr7	24370135	24371160	+	0	NA	Intergenic	L1Md_F|LINE|L1	8443	NM_001166843	100043103	Mm.480300	NM_001166843	ENSMUSG00000094602	Vmn1r169	Gm4232	vomeronasal 1 receptor 169	protein-coding
common_peak2-28520-78-92-0.267662283052504-0.727493611084222	chr5	93092921	93094784	+	0	NA	intron (NM_177230, intron 4 of 24)	RMER17B|LTR|ERVK	10301	NM_177230	320696	Mm.209991	NM_177230	ENSMUSG00000050050	Ccdc158	4932413O14Rik	coiled-coil domain containing 158	protein-coding
unique_peak1-3565-12-2-2.06381348436648-2.79529063155376	chr19	27328698	27329402	+	0	NA	TTS (NM_001161420)	TTS (NM_001161420)	37540	NM_001161420	22359	Mm.4141	NM_013703	ENSMUSG00000024924	Vldlr	AA408956|AI451093|AW047288	very low density lipoprotein receptor	protein-coding
unique_peak2-36824-2-6--1.72480917832092-1.26211192963361	chr3	88376510	88376823	+	0	NA	Intergenic	L1_Mur2|LINE|L1	-6927	NM_025448	66256	Mm.7091	NM_025448	ENSMUSG00000041355	Ssr2	1500032E05Rik|AI315033|AU020133|TLAP|TRAPB|TRAPbeta	signal sequence receptor, beta	protein-coding
common_peak1-18408-27-31--0.00845404910476422-0.304476922018591	chr8	72239844	72240812	+	0	NA	promoter-TSS (NM_181274)	promoter-TSS (NM_181274)	57	NM_181274	66869	Mm.334581	NM_181274		Zfp869	1200003I07Rik	zinc finger protein 869	protein-coding
common_peak2-29105-34-40-0.0245165223831822-0.311623594475992	chr5	122778731	122780021	+	0	NA	intron (NM_144912, intron 10 of 10)	intron (NM_144912, intron 10 of 10)	24828	NM_144912	231724	Mm.255587	NM_144912	ENSMUSG00000038569	Rad9b	A630082N15Rik|BC021784	RAD9 homolog B	protein-coding
common_peak2-20575-32-33-0.191629177969321-0.409729630423047	chr10	77210865	77212104	+	0	NA	intron (NM_001287074, intron 1 of 11)	MTEa|LTR|MaLR	22253	NM_001205033	100502953	Mm.486157	NM_001205033	ENSMUSG00000096421	Gm10100	ENSMUSG00000061452	predicted gene 10100	protein-coding
common_peak2-30796-18-35--0.857005850213961-1.20071330053878	chr7	127375346	127376459	+	0	NA	intron (NM_026458, intron 10 of 30)	Charlie1a|DNA|MER1_type	28424	NM_026458	67928	Mm.158178	NM_026458	ENSMUSG00000062017	Abca14	1700110B15Rik|4930539G24Rik	ATP-binding cassette, sub-family A (ABC1), member 14	protein-coding
common_peak1-16943-21-18-0.32156175182265-0.48779450977742	chr6	83775223	83776203	+	0	NA	intron (NM_146169, intron 2 of 4)	PB1D10|SINE|Alu	6022	NM_146169	232164	Mm.404420	NM_146169	ENSMUSG00000045896	Paip2b	-	poly(A) binding protein interacting protein 2B	protein-coding
common_peak1-11336-9-10--0.269818212233077-1.05503135781948	chr15	86067836	86068229	+	0	NA	intron (NM_145476, intron 3 of 12)	ORR1C1|LTR|MaLR	23143	NM_145476	223754	Mm.28904	NM_145476	ENSMUSG00000051864	Tbc1d22a	BC023106|D15Ertd781e	TBC1 domain family, member 22a	protein-coding
unique_peak2-38504-3-7--1.41398308995928-1.23214870625617	chr7	41633617	41633933	+	0	NA	Intergenic	Intergenic	-2320563	NM_001013810	434171	Mm.60990	NM_001013810	ENSMUSG00000060565	Gm5591	EG434171	predicted gene 5591	protein-coding
common_peak1-10882-147-218-0.130681867081514-0.530592700584508	chr15	79346424	79349027	+	0	NA	intron (NM_134090, intron 1 of 4)	intron (NM_134090, intron 1 of 4)	887	NM_134090	105785	Mm.298199	NM_134090	ENSMUSG00000010830	Kdelr3	AI173274	KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	protein-coding
common_peak2-24041-16-11-0.533301141546906-0.58239619684445	chr16	25011231	25011824	+	0	NA	Intergenic	Intergenic	-48198	NR_040374	319487	Mm.137341	NR_040374	ENSMUSG00000096960	A230028O05Rik	-	RIKEN cDNA A230028O05 gene	ncRNA
common_peak2-23345-13-13--0.0288828914198356-0.309074325783021	chr15	39112047	39112664	+	0	NA	intron (NM_053271, intron 3 of 26)	L1Md_F2|LINE|L1	82523	NM_053271	116838	Mm.309296	NM_053271		Rims2	2810036I15Rik|AW048769|RIM2|Rab3ip2|Rim2(+40A)|Rim2(+44A)|Rim2(+4A)|Serg2|Syt3-rs|mKIAA0751	regulating synaptic membrane exocytosis 2	protein-coding
common_peak2-32112-10-18--0.891512168434816-0.804350088532826	chr9	101034255	101034909	+	0	NA	intron (NM_172144, intron 9 of 12)	L1Md_F2|LINE|L1	56096	NM_001100451	77853	Mm.326206	NM_001100451		Msl2	E130103E02Rik|Msl2l1|Rnf184	male-specific lethal 2 homolog (Drosophila)	protein-coding
unique_peak1-3788-10-4-1.03448725012141-1.5150158574804	chr19	55895016	55895498	+	0	NA	intron (NM_009333, intron 4 of 12)	B3A|SINE|B2	-74554	NM_001142924	21416	Mm.139815	NM_009333	ENSMUSG00000024985	Tcf7l2	TCF4B|TCF4E|Tcf-4|Tcf4|mTcf-4B|mTcf-4E	transcription factor 7 like 2, T cell specific, HMG box	protein-coding
common_peak1-17733-96-153--0.100735326339572-0.360261037462896	chr7	80401477	80403560	+	0	NA	Intergenic	Lx7|LINE|L1	-52748	NR_105062	100505025	Mm.445959	NR_105062		LOC100505025	-	uncharacterized LOC100505025	ncRNA
unique_peak1-3621-9-3-1.18961340640422-1.57096726280955	chr19	36127709	36128153	+	0	NA	intron (NM_008315, intron 1 of 2)	B1_Mur4|SINE|Alu	3919	NM_008315	15566	Mm.254266	NM_008315	ENSMUSG00000024798	Htr7	5-HT7	5-hydroxytryptamine (serotonin) receptor 7	protein-coding
common_peak2-25149-79-67-0.741372325926281-2.98180199283537	chr18	46597692	46599144	+	0	NA	Intergenic	Intergenic	27052	NR_045438	72076	Mm.82766	NM_028086	ENSMUSG00000046487	Mospd4	2010013H21Rik	motile sperm domain containing 4	pseudo
unique_peak2-33819-2-5--1.50241675698448-1.08602067057793	chr12	3855657	3855988	+	0	NA	intron (NM_001271753, intron 3 of 22)	intron (NM_001271753, intron 3 of 22)	6422	NR_045884	100038522	Mm.417270	NR_045884	ENSMUSG00000073242	Dnmt3aos	ENSMUSG00000073242|Gm10485	DNA methyltransferase 3A, opposite strand	ncRNA
common_peak1-8677-16-19--0.203664452619301-0.325169893479371	chr11	78511596	78512296	+	0	NA	Intergenic	Intergenic	-1019	NM_008702	18099	Mm.9001	NM_008702	ENSMUSG00000017376	Nlk	AI194375	nemo like kinase	protein-coding
common_peak1-16024-50-17-1.87101531503664-7.01056937775424	chr5	36040876	36042625	+	0	NA	intron (NM_194344, intron 17 of 17)	intron (NM_194344, intron 17 of 17)	-19321	NM_030127	78558	Mm.274255	NM_030127	ENSMUSG00000029096	Htra3	2210021K23Rik|9530081K03Rik|Prsp|Tasp	HtrA serine peptidase 3	protein-coding
common_peak1-13059-19-9-1.08075923177432-1.37307999835977	chr19	6084204	6084916	+	0	NA	promoter-TSS (NM_026410)	promoter-TSS (NM_026410)	331	NM_024231	81909	Mm.289471	NM_024231	ENSMUSG00000024792	Zfpl1	1500015B20Rik	zinc finger like protein 1	protein-coding
common_peak1-14710-13-10-0.319040412000471-0.446472590016315	chr3	75939102	75939653	+	0	NA	intron (NM_001253719, intron 1 of 15)	(TCTA)n|Simple_repeat|Simple_repeat	59872	NM_001253719	213262	Mm.379337	NM_178673	ENSMUSG00000034098	Fstl5	9130207J01Rik	follistatin-like 5	protein-coding
unique_peak2-34352-3-7--1.41398308995928-1.23214870625617	chr13	100652272	100652638	+	0	NA	Intergenic	L1M3e|LINE|L1	18183	NM_013732	27220	Mm.75498	NM_013732	ENSMUSG00000021647	Cartpt	Cart	CART prepropeptide	protein-coding
unique_peak2-38828-5-6--0.511735258063458-0.947717972411649	chr7	141265907	141266317	+	0	NA	intron (NM_007400, intron 3 of 22)	Lx8|LINE|L1	150668	NM_007400	11489	Mm.439714	NM_007400	ENSMUSG00000054555	Adam12	Mltna|mKIAA4001	a disintegrin and metallopeptidase domain 12 (meltrin alpha)	protein-coding
common_peak2-20351-23-22-0.198205548452068-0.373496418836697	chr10	8890693	8891746	+	0	NA	Intergenic	Intergenic	-285351	NM_175155	70097	Mm.338275	NM_175155	ENSMUSG00000015305	Sash1	1100001C18Rik|2500002E12Rik|A330076K04Rik|mKIAA0790	SAM and SH3 domain containing 1	protein-coding
common_peak1-8530-12-9-0.326847890200276-0.459837087125828	chr10	88503284	88503947	+	0	NA	intron (NM_001277188, intron 8 of 27)	intron (NM_001277188, intron 8 of 27)	154878	NM_145423	216225	Mm.77381	NM_145423	ENSMUSG00000020062	Slc5a8	Ait|SMCT	solute carrier family 5 (iodide transporter), member 8	protein-coding
common_peak2-21509-7-6--0.00826409175941478-0.97990265578305	chr11	94158387	94158813	+	0	NA	intron (NM_026313, intron 7 of 10)	intron (NM_026313, intron 7 of 10)	24625	NM_026313	67684	Mm.30927	NM_026313	ENSMUSG00000020863	Luc7l3	3300001P08Rik|Luc7a	LUC7-like 3 (S. cerevisiae)	protein-coding
unique_peak1-1573-9-2-1.60465090568306-1.87199725847353	chr13	31519053	31519548	+	0	NA	Intergenic	Intergenic	-130739	NM_008239	15220	Mm.44235	NM_008239	ENSMUSG00000038415	Foxq1	HFH-1|Hfh1|Hfh1l|sa	forkhead box Q1	protein-coding
common_peak1-10159-6-5--0.0195643903408542-0.947717972411649	chr13	37456773	37457242	+	0	NA	intron (NM_010745, intron 1 of 4)	L1MEd|LINE|L1	19793	NM_010745	17084	Mm.2639	NM_010745	ENSMUSG00000021423	Ly86	MD-1|MD1	lymphocyte antigen 86	protein-coding
common_peak1-18124-26-9-1.6059709972711-2.89150037906958	chr8	8330240	8331266	+	0	NA	Intergenic	L1_Mus4|LINE|L1	330020	NM_010111	13642	Mm.209813	NM_010111	ENSMUSG00000001300	Efnb2	ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1	ephrin B2	protein-coding
unique_peak1-1393-9-1-2.18961340640422-2.31132995230379	chr12	69524260	69524720	+	0	NA	Intergenic	Intergenic	735683	NM_009093	20090	Mm.379006	NM_009093	ENSMUSG00000034892	Rps29	-	ribosomal protein S29	protein-coding
common_peak1-18555-18-14-0.406028555619833-0.532159081577619	chr8	104386310	104387098	+	0	NA	Intergenic	L1_Mus3|LINE|L1	922307	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
common_peak1-11853-33-35-0.161412561083217-0.373466121463208	chr16	91043592	91044649	+	0	NA	intron (NM_026110, intron 1 of 17)	intron (NM_026110, intron 1 of 17)	504	NM_026110	67367	Mm.347	NM_026110	ENSMUSG00000022974	Paxbp1	1810007M14Rik|C21orf66|Gcfc|Gcfc1|Pax3/7bp	PAX3 and PAX7 binding protein 1	protein-coding
common_peak2-25922-12-6-0.841421063030034-1.58711810488664	chr19	46471480	46471898	+	0	NA	exon (NM_015752, exon 1 of 12)	exon (NM_015752, exon 1 of 12)	303	NM_015752	24069	Mm.41210	NM_015752	ENSMUSG00000025231	Sufu	Su(fu)	suppressor of fused homolog (Drosophila)	protein-coding
common_peak2-22823-6070-6092-1.83250354286562-Inf	chr14	19415613	19419782	+	0	NA	intron (NM_144839, intron 5 of 5)	intron (NM_144839, intron 5 of 5)	-253339	NM_009455	22194	Mm.4429	NM_009455	ENSMUSG00000021774	Ube2e1	UbcM3|Ubce5|ubcM2	ubiquitin-conjugating enzyme E2E 1	protein-coding
common_peak1-7949-25-15-0.861849905345106-1.28534286439186	chr1	153172159	153173293	+	0	NA	Intergenic	Intergenic	-18902	NM_001039512	117198	Mm.33764	NM_028582	ENSMUSG00000023150	Ivns1abp	1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850	influenza virus NS1A binding protein	protein-coding
unique_peak2-35327-7-14--1.10779976531033-0.817533494790411	chr17	21707193	21708047	+	0	NA	intron (NM_001002008, intron 2 of 5)	L1M2|LINE|L1	3610	NM_001002008	381066	Mm.441097	NM_001002008	ENSMUSG00000067931	Zfp948	-	zinc finger protein 948	protein-coding
common_peak1-12486-45-80--0.479491977539753-1.06587805992858	chr17	86166366	86168165	+	0	NA	Intergenic	Intergenic	-79671	NM_011380	20472	Mm.5039	NM_011380	ENSMUSG00000024134	Six2	-	sine oculis-related homeobox 2	protein-coding
unique_peak2-39180-3-8--1.58390809140159-1.39487600375387	chr8	95081182	95081563	+	0	NA	Intergenic	Intergenic	-116816	NM_022428	64379	Mm.137247	NM_022428		Irx6	-	Iroquois related homeobox 6 (Drosophila)	protein-coding
common_peak1-13287-17-18--0.0296311752385474-0.306899554715732	chr19	38038205	38039146	+	0	NA	intron (NM_001099634, intron 18 of 52)	MTEb|LTR|MaLR	79392	NM_001099634	226101	Mm.34674	NM_177035	ENSMUSG00000048612	Myof	2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3	myoferlin	protein-coding
common_peak2-24490-11-19--0.813234510635749-0.769930178837768	chr17	25166231	25166782	+	0	NA	intron (NM_134126, intron 6 of 29)	intron (NM_134126, intron 6 of 29)	13475	NM_134126	106633	Mm.32802	NM_134126	ENSMUSG00000024169	Ift140	AI661311|Tce5|Wdtc2|mKIAA0590	intraflagellar transport 140	protein-coding
unique_peak1-116-7-1-1.79909083029819-1.80617997398389	chr1	59739795	59740364	+	0	NA	Intergenic	Intergenic	-1771	NM_018868	55989	Mm.220367	NM_018868	ENSMUSG00000026020	Nop58	MSSP|Nol5|SIK|nop5	NOP58 ribonucleoprotein	protein-coding
unique_peak1-3512-11-0-3.50869358425161-3.61235994796777	chr19	16292142	16292704	+	0	NA	intron (NM_008139, intron 1 of 6)	intron (NM_008139, intron 1 of 6)	53835	NR_033228	595139	Mm.405662	NR_033228		E030024N20Rik	9030417F11Rik|Ppia-ps8	peptidylprolyl isomerase A pseudogene 8	pseudo
common_peak1-15789-63-63-0.43831259107059-1.13847008030447	chr4	155601107	155602097	+	0	NA	intron (NM_001008233, intron 2 of 15)	intron (NM_001008233, intron 2 of 15)	1049	NM_001008233	231002	Mm.423124	NM_001008233	ENSMUSG00000078485	Plekhn1	BC025458	pleckstrin homology domain containing, family N member 1	protein-coding
common_peak1-8490-30-69--0.959607607453093-2.5917804265315	chr10	80798424	80799334	+	0	NA	TTS (NM_001277265)	TTS (NM_001277265)	7132	NM_148951	209047	Mm.218755	NM_148951	ENSMUSG00000034872	Gipc3	Ahl5|Rgs19ip3	GIPC PDZ domain containing family, member 3	protein-coding
common_peak1-13373-14-19--0.422711934529718-0.403453972741636	chr19	46348684	46349410	+	0	NA	intron (NM_178930, intron 29 of 39)	PB1D9|SINE|Alu	-30180	NM_001177369	18034	Mm.102365	NM_019408	ENSMUSG00000025225	Nfkb2	NF-kappaB2|lyt|p49|p49/p100|p50B|p52	nuclear factor of kappa light polypeptide gene enhancer in B cells 2, p49/p100	protein-coding
unique_peak2-34125-15-53--1.74272275160781-4.84405324694467	chr13	21809257	21810234	+	0	NA	exon (NM_178206, exon 1 of 1)	exon (NM_178206, exon 1 of 1)	248	NM_178206	319152	Mm.377874	NM_178206	ENSMUSG00000069312	Hist1h3h	H3-291	histone cluster 1, H3h	protein-coding
unique_peak1-745-7-1-1.79909083029819-1.80617997398389	chr10	111588391	111588892	+	0	NA	Intergenic	L1Md_T|LINE|L1	-14091	NM_178278	353025	Mm.194428	NM_178278	ENSMUSG00000035694	Caps2	D630005B03Rik	calcyphosphine 2	protein-coding
common_peak1-11545-10-10--0.103016273628528-0.301029995663987	chr16	5233549	5234068	+	0	NA	promoter-TSS (NM_145362)	promoter-TSS (NM_145362)	94	NM_145362	208211	Mm.34581	NM_145362	ENSMUSG00000039427	Alg1	HMAT1|HMT1	asparagine-linked glycosylation 1 (beta-1,4-mannosyltransferase)	protein-coding
common_peak2-24227-26-19-0.6059709972711-0.841847921495509	chr16	85176661	85177585	+	0	NA	Intergenic	Intergenic	-3171	NM_001198826	11820	Mm.277585	NM_007471	ENSMUSG00000022892	App	Abeta|Abpp|Adap|Ag|Cvap|E030013M08Rik|betaApp	amyloid beta (A4) precursor protein	protein-coding
common_peak1-13647-56-58-0.352952776077402-0.774169551378916	chr2	26351026	26352255	+	0	NA	intron (NM_008714, intron 2 of 33)	intron (NM_008714, intron 2 of 33)	7702	NM_008714	18128	Mm.290610	NM_008714	ENSMUSG00000026923	Notch1	9930111A19Rik|Mis6|N1|Tan1|lin-12	notch 1	protein-coding
common_peak1-12667-19-27--0.404667595395917-0.464317215211849	chr18	36678539	36679507	+	0	NA	Intergenic	MER5B|DNA|MER1_type	-3564	NM_010415	15200	Mm.289681	NM_010415	ENSMUSG00000024486	Hbegf	AW047313|Dtr|Dts|Hegfl	heparin-binding EGF-like growth factor	protein-coding
unique_peak1-7248-12-3-1.64877598508764-2.36932189928148	chr9	78225656	78226324	+	0	NA	intron (NM_026480, intron 1 of 2)	intron (NM_026480, intron 1 of 2)	405	NM_026480	67968	Mm.26883	NM_026480		Ooep	2410146L05Rik|Floped|Moep19|Sddr	oocyte expressed protein	protein-coding
unique_peak2-36312-3-6--1.22133801201688-1.08602067057793	chr2	77245754	77246160	+	0	NA	Intergenic	Intergenic	-54744	NR_040368	100503106	Mm.443215	NR_040368	ENSMUSG00000085845	Gm13944	OTTMUSG00000015155	predicted gene 13944	ncRNA
common_peak2-24941-34-69--0.7472144899437-1.74156632662937	chr18	75366250	75367249	+	0	NA	intron (NM_027727, intron 14 of 16)	L1MA9|LINE|L1	90222	NR_045394	100503117	Mm.250517	NR_045393		2010010A06Rik	5033420E22Rik	RIKEN cDNA 2010010A06 gene	ncRNA
unique_peak1-5829-15-6-1.20480982849805-1.32521814697968	chr6	72303770	72304482	+	0	NA	TTS (NM_026696)	TTS (NM_026696)	-1351	NM_144916	232086	Mm.491165	NM_144916	ENSMUSG00000055912	Tmem150a	BC014685|Tmem150	transmembrane protein 150A	protein-coding
unique_peak2-33907-3-4--0.73591118484664-0.864171920961574	chr12	57544261	57544694	+	0	NA	Intergenic	L1_Mus1|LINE|L1	85930	NR_045082	104798	Mm.310950	NR_045082		E030019B13Rik	AI413669	RIKEN cDNA E030019B13 gene	ncRNA
unique_peak2-33948-4-6--0.830815435910851-0.989110657569874	chr12	76535708	76536119	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-18145	NM_175644	217674	Mm.252250	NM_175644	ENSMUSG00000048982	Gphb5	Zlut1	glycoprotein hormone beta 5	protein-coding
common_peak1-17568-30-56--0.663214604672868-1.25272902092874	chr7	35055830	35056706	+	0	NA	intron (NM_172741, intron 1 of 12)	B1_Mus1|SINE|Alu	14360	NM_172741	233103	Mm.491097	NM_172741	ENSMUSG00000066571	4931406P16Rik	AA553327|mKIAA0355	RIKEN cDNA 4931406P16 gene	protein-coding
unique_peak1-6284-13-2-2.19350952991661-3.03832868024006	chr7	28840745	28841314	+	0	NA	Intergenic	Intergenic	-5918	NM_011874	23996	Mm.29582	NM_011874	ENSMUSG00000030603	Psmc4	CIP21|MIP224	proteasome (prosome, macropain) 26S subunit, ATPase, 4	protein-coding
unique_peak1-6899-8-0-3.00522241794757-2.70926996097583	chr8	95643953	95644187	+	0	NA	intron (NM_007954, intron 6 of 12)	intron (NM_007954, intron 6 of 12)	11112	NM_007954	13884	Mm.88078	NM_007954	ENSMUSG00000057400	Ces1c	Ces-N|Ee-1|Ee1|Es-4|Es-N|Es1|Es4|EsN|PESN	carboxylesterase 1C	protein-coding
unique_peak2-39647-10-14--0.550475250599749-0.446472590016315	chr9	106280614	106281452	+	0	NA	Intergenic	Intergenic	10070	NM_153459	235584	Mm.275584	NM_153459	ENSMUSG00000053716	Dusp7	AU015694|Mkpx|Pyst2	dual specificity phosphatase 7	protein-coding
common_peak2-23949-20-24--0.155781405183531-0.319918318021793	chr16	14162690	14163802	+	0	NA	promoter-TSS (NM_023317)	promoter-TSS (NM_023317)	-122	NM_023317	67203	Mm.24105	NM_023317	ENSMUSG00000022678	Nde1	2810027M15Rik|AU042936|AW822251|Nude|mNudE	nuclear distribution gene E homolog 1 (A nidulans)	protein-coding
unique_peak1-42-9-2-1.60465090568306-1.87199725847353	chr1	20875160	20875798	+	0	NA	Intergenic	Intergenic	5075	NR_040492	77741	Mm.159984	NR_040492	ENSMUSG00000097934	6720483E21Rik	-	RIKEN cDNA 6720483E21 gene	ncRNA
common_peak2-23774-105-111-0.513978988465563-2.23552886390585	chr15	98870715	98872599	+	0	NA	Intergenic	Intergenic	11335	NM_009448	22146	Mm.88212	NM_009448	ENSMUSG00000043091	Tuba1c	M[a]6|Tuba6	tubulin, alpha 1C	protein-coding
common_peak2-28209-10-8-0.186490343566457-1.078512453669	chr4	117550393	117550880	+	0	NA	intron (NR_045570, intron 4 of 8)	L2b|LINE|L2	5445	NR_045570	53418	Mm.123843	NM_017377	ENSMUSG00000028541	B4galt2	Ggtb2	UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2	protein-coding
common_peak2-27697-17-14-0.311405742596519-0.466170754204149	chr3	121672026	121672767	+	0	NA	intron (NM_172525, intron 1 of 22)	intron (NM_172525, intron 1 of 22)	16152	NM_172525	214137	Mm.229287	NM_172525	ENSMUSG00000039831	Arhgap29	6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1	Rho GTPase activating protein 29	protein-coding
common_peak2-26359-9-6-0.382258484346616-1.11707584880836	chr2	38484796	38485134	+	0	NA	intron (NM_011187, intron 5 of 7)	L1M5|LINE|L1	14461	NM_011187	19177	Mm.389251	NM_011187	ENSMUSG00000026750	Psmb7	AU020723|MC14	proteasome (prosome, macropain) subunit, beta type 7	protein-coding
unique_peak1-6100-10-2-1.77145284428761-2.09384600808989	chr6	125441867	125442258	+	0	NA	intron (NM_007657, intron 1 of 7)	intron (NM_007657, intron 1 of 7)	2711	NM_007657	12527	Mm.210676	NM_007657	ENSMUSG00000030342	Cd9	Tspan29	CD9 antigen	protein-coding
unique_peak2-36967-3-11--1.99894559068043-1.95434855131066	chr3	113309078	113309664	+	0	NA	3' UTR (NM_001038696, exon 15 of 15)	3' UTR (NM_001038696, exon 15 of 15)	23696	NM_026043	67225	Mm.316928	NM_026043	ENSMUSG00000027981	Rnpc3	2810441O16Rik|AI447568|C030014B17Rik	RNA-binding region (RNP1, RRM) containing 3	protein-coding
unique_peak2-39965-2-9--2.23938235115068-1.87199725847353	chrX	142680314	142680749	+	0	NA	Intergenic	Intergenic	-716525	NM_008312	15560	Mm.439670	NM_008312	ENSMUSG00000041380	Htr2c	5-HT2C|5-HT2cR|5-HTR2C|5HT1c|Htr1c|SR1	5-hydroxytryptamine (serotonin) receptor 2C	protein-coding
common_peak2-21339-14-20--0.493101262421116-0.456667090758524	chr11	76494345	76495202	+	0	NA	intron (NM_177709, intron 1 of 2)	intron (NM_177709, intron 1 of 2)	1398	NM_177709	237858	Mm.127006	NM_177709	ENSMUSG00000046275	Tusc5	C130069F04Rik|DSPB1|Lost1	tumor suppressor candidate 5	protein-coding
common_peak2-26666-13-12-0.0780323124966764-0.334470287753051	chr2	121956530	121957059	+	0	NA	intron (NM_026251, intron 2 of 17)	intron (NM_026251, intron 2 of 17)	-12672	NM_145531	214585	Mm.222303	NM_145531	ENSMUSG00000033396	Spg11	6030465E24Rik|A330015I11|C530005A01Rik	spastic paraplegia 11	protein-coding
common_peak1-14705-11-21--0.950738034385684-0.991115276827166	chr3	69252555	69253114	+	0	NA	intron (NM_178726, intron 1 of 3)	intron (NM_178726, intron 1 of 3)	131994	NM_178726	242083	Mm.40577	NM_178726		Ppm1l	3222401G13|5930404J21Rik|AI481720|AW045850|PP2C|PP2Cepsilon|Pp2ce|Ppp2ce|mKIAA4175	protein phosphatase 1 (formerly 2C)-like	protein-coding
common_peak2-29607-23-20-0.32945008173032-0.471456499375596	chr6	52825834	52826659	+	0	NA	intron (NM_173406, intron 2 of 4)	intron (NM_173406, intron 2 of 4)	33368	NM_001168277	231986	Mm.386865	NM_173406		Jazf1	AI591476|C820002C15|Jaz1|Tip27	JAZF zinc finger 1	protein-coding
common_peak1-14628-18-24--0.330937038546373-0.380101753845076	chr3	54735460	54736078	+	0	NA	Intergenic	Intergenic	-15960	NM_177854	329641	Mm.51187	NM_177854	ENSMUSG00000056306	Sertm1	6030405A18Rik	serine rich and transmembrane domain containing 1	protein-coding
common_peak1-12402-21-35--0.600435736176077-0.748982406290541	chr17	71183532	71184267	+	0	NA	Intergenic	CpG	12218	NM_001164077	21815	Mm.101034	NM_009372	ENSMUSG00000047407	Tgif1	AA959811|AI462167|Tgif	TGFB-induced factor homeobox 1	protein-coding
unique_peak1-3424-17-5-1.63333383748388-2.19184853030482	chr19	6295910	6296883	+	0	NA	intron (NM_010119, intron 3 of 4)	intron (NM_010119, intron 3 of 4)	-10061	NM_001033342	240505	Mm.329622	NM_001033342	ENSMUSG00000024769	Cdc42bpg	BC046418|MRCKgamma	CDC42 binding protein kinase gamma (DMPK-like)	protein-coding
common_peak1-17185-55-53-0.449732368989234-1.05853523251719	chr6	124414156	124416018	+	0	NA	promoter-TSS (NM_153508)	promoter-TSS (NM_153508)	-285	NM_153508	232370	Mm.193701	NM_153508	ENSMUSG00000008153	Clstn3	CSTN3|Cs3|Cst-3|mKIAA0726	calsyntenin 3	protein-coding
common_peak1-16410-19-12-0.702247608520594-0.840839978588874	chr5	126537339	126538082	+	0	NA	Intergenic	AT_rich|Low_complexity|Low_complexity	524922	NM_001190352	208151	Mm.40397	NM_001190352	ENSMUSG00000070498	Tmem132b	AK220418|mKIAA1786	transmembrane protein 132B	protein-coding
common_peak2-29796-27-28-0.133564955767664-0.358978896303361	chr6	90987587	90988744	+	0	NA	intron (NM_018815, intron 25 of 39)	intron (NM_018815, intron 25 of 39)	78655	NM_018815	54563	Mm.28162	NM_018815	ENSMUSG00000030091	Nup210	9830001L10|AI836801|Pom210|gp190|gp210	nucleoporin 210	protein-coding
common_peak1-7611-11-10-0.0492619656143161-0.31137425193576	chr1	59579666	59580223	+	0	NA	intron (NM_001013771, intron 1 of 19)	B1_Mus2|SINE|Alu	6836	NM_001013771	381260	Mm.486706	NM_001013771	ENSMUSG00000047361	Gm973	AW554518	predicted gene 973	protein-coding
common_peak2-25870-16-16-0.0308008010177225-0.307611222530525	chr19	43674209	43674950	+	0	NA	Intergenic	Intergenic	-12236	NM_008699	18089	Mm.56994	NM_008699	ENSMUSG00000044220	Nkx2-3	Nkx-2.3|Nkx2.3|tinman	NK2 homeobox 3	protein-coding
common_peak1-9222-30-31-0.169675409491873-0.382130460680153	chr11	83941781	83943025	+	0	NA	intron (NM_172562, intron 1 of 15)	intron (NM_172562, intron 1 of 15)	667	NM_172562	217031	Mm.45159	NM_172562	ENSMUSG00000018651	Tada2a	AV319371|D030022J10Rik|Tada2l	transcriptional adaptor 2A	protein-coding
common_peak1-12867-41-45-0.177586748791647-0.410818340144418	chr18	76052694	76054136	+	0	NA	intron (NM_145356, intron 1 of 4)	MIRb|SINE|MIR	73583	NM_145356	207259	Mm.159332	NM_145356	ENSMUSG00000044646	Zbtb7c	B230208J24Rik|Kr-pok|Zbtb36	zinc finger and BTB domain containing 7C	protein-coding
common_peak1-11045-46-76--0.368790597446099-0.710725903974579	chr15	51864646	51865879	+	0	NA	Intergenic	(A)n|Simple_repeat|Simple_repeat	-6391	NM_175503	239435	Mm.24204	NM_175503	ENSMUSG00000068522	Aard	A5D3|AV328152	alanine and arginine rich domain containing protein	protein-coding
unique_peak2-38355-3-8--1.58390809140159-1.39487600375387	chr7	3617315	3617797	+	0	NA	promoter-TSS (NM_027203)	promoter-TSS (NM_027203)	-114	NM_027203	69757	Mm.389782	NM_027203	ENSMUSG00000078813	Leng1	1500001K17Rik	leukocyte receptor cluster (LRC) member 1	protein-coding
unique_peak1-1991-10-1-2.35641534500877-2.57096726280955	chr15	64421398	64421903	+	0	NA	Intergenic	Intergenic	-207169	NM_010026	13196	Mm.277236	NM_010026	ENSMUSG00000022377	Asap1	AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19	ArfGAP with SH3 domain, ankyrin repeat and PH domain1	protein-coding
common_peak2-26715-69-83-0.202825024479972-0.537718187625393	chr2	129800523	129802170	+	0	NA	Intergenic	Lx9|LINE|L1	-36730	NM_009374	21818	Mm.2961	NM_009374	ENSMUSG00000027401	Tgm3	AI893889|TG E|TG(E)|TGE|TGase E|TGase-3	transglutaminase 3, E polypeptide	protein-coding
common_peak2-21975-77-67-0.697063738305658-2.592278230509	chr12	49390894	49392400	+	0	NA	Intergenic	Intergenic	-1092223	NM_001160112	15228	Mm.4704	NM_008241	ENSMUSG00000020950	Foxg1	2900064B05Rik|BF-1|Bf1|Hfh9|Hfhbf1	forkhead box G1	protein-coding
common_peak2-31287-9-18--1.05831410703937-0.965105923112245	chr8	72443804	72444338	+	0	NA	intron (NM_001113346, intron 3 of 12)	intron (NM_001113346, intron 3 of 12)	-17614	NM_023312	67184	Mm.21162	NM_023312	ENSMUSG00000036199	Ndufa13	2700054G14Rik|AU022060|CDA016|CGI-39|GRIM-19|Grim19	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13	protein-coding
common_peak2-23374-12-5-1.06381348436648-1.78669045979184	chr15	55142067	55142435	+	0	NA	intron (NM_181277, intron 1 of 47)	intron (NM_181277, intron 1 of 47)	2946	NM_181277	12818	Mm.297859	NM_181277	ENSMUSG00000022371	Col14a1	5730412L22Rik|AW108078	collagen, type XIV, alpha 1	protein-coding
unique_peak2-38944-3-23--2.99894559068043-4.08960682824985	chr8	25969263	25970031	+	0	NA	intron (NM_001293693, intron 17 of 19)	L1_Mus4|LINE|L1	-34806	NM_001272059	11499	Mm.143889	NM_007401	ENSMUSG00000031554	Adam5	tMDC II|tMDCII	a disintegrin and metallopeptidase domain 5	protein-coding
unique_peak2-36186-6-8--0.60452689106201-1.03789460276074	chr2	30656888	30657290	+	0	NA	5' UTR (NM_198000, exon 1 of 7)	5' UTR (NM_198000, exon 1 of 7)	168	NM_198000	73598	Mm.34166	NM_198000	ENSMUSG00000044320	1700001O22Rik	1700113K14Rik|4930549G18Rik	RIKEN cDNA 1700001O22 gene	protein-coding
unique_peak1-4406-12-6-0.841421063030034-1.58711810488664	chr2	167318824	167319402	+	0	NA	promoter-TSS (NM_170756)	promoter-TSS (NM_170756)	-739	NM_170756	263876	Mm.34342	NM_170756	ENSMUSG00000047030	Spata2	AI504642|mKIAA0757	spermatogenesis associated 2	protein-coding
unique_peak2-36289-8-7-0.00522241794757061-1.00793137938329	chr2	69789642	69790103	+	0	NA	intron (NM_177783, intron 13 of 38)	intron (NM_177783, intron 13 of 38)	54569	NM_001081548	68795	Mm.314576	NM_177783	ENSMUSG00000044308	Ubr3	1110059H15Rik|4833421P10Rik|A130030D10Rik|AA409735|AA414972|AA422631|AI646861|AU016126|Zfp650|Znf650	ubiquitin protein ligase E3 component n-recognin 3	protein-coding
unique_peak2-34682-4-9--1.34538860874061-1.36011389749466	chr15	11043372	11044011	+	0	NA	intron (NM_175501, intron 2 of 23)	intron (NM_175501, intron 2 of 23)	49146	NM_175501	239337	Mm.482727	NM_175501	ENSMUSG00000047497	Adamts12	ADAMTS-12|AI605170	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12	protein-coding
unique_peak1-300-10-6-0.549060422951165-1.21398586181642	chr1	127205411	127205938	+	0	NA	Intergenic	RMER17C|LTR|ERVK	126630	NM_023735	74117	Mm.183102	NM_023735	ENSMUSG00000026341	Actr3	1200003A09Rik|Arp3	ARP3 actin-related protein 3	protein-coding
unique_peak1-934-14-6-1.09186123830004-1.16633110333236	chr11	53761968	53762447	+	0	NA	Intergenic	LTR16E2|LTR|ERVL	31322	NM_019723	56517	Mm.154284	NM_019723	ENSMUSG00000063652	Slc22a21	Octn3|Slc22a9	solute carrier family 22 (organic cation transporter), member 21	protein-coding
common_peak2-26215-8-5-0.420259917226415-1.10484139239135	chr2	26445706	26446100	+	0	NA	promoter-TSS (NR_029541)	promoter-TSS (NR_029541)	-974	NR_029541	387145		NR_029541		Mir126a	Mir126|Mirn126|mmu-mir-126|mmu-mir-126a	microRNA 126a	ncRNA
common_peak2-23679-22-27--0.160070816970199-0.317737750275047	chr15	85685173	85685850	+	0	NA	intron (NM_001033337, intron 13 of 13)	intron (NM_001033337, intron 13 of 13)	-4626	NM_001168672	29870	Mm.20858	NM_013882	ENSMUSG00000022385	Gtse1	B99|Gtse-1	G two S phase expressed protein 1	protein-coding
common_peak2-23678-24-16-0.705747061517378-1.02077663956384	chr15	85684454	85685038	+	0	NA	intron (NM_001033337, intron 13 of 13)	B1_Mus1|SINE|Alu	-5391	NM_001168672	29870	Mm.20858	NM_013882	ENSMUSG00000022385	Gtse1	B99|Gtse-1	G two S phase expressed protein 1	protein-coding
common_peak1-10968-8-10--0.454209200689727-1.078512453669	chr15	27976881	27977478	+	0	NA	Intergenic	Intergenic	-21576	NM_001081302	223435	Mm.485422	NM_001081302	ENSMUSG00000022263	Trio	6720464I07Rik|AA408740|Solo	triple functional domain (PTPRF interacting)	protein-coding
unique_peak2-38200-9-17--0.980311595038092-0.844317084070804	chr6	112379125	112379821	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	-30026	NM_007617	12391	Mm.3924	NM_007617	ENSMUSG00000062694	Cav3	AI385751|Cav-3|M-cav	caveolin 3	protein-coding
common_peak2-24039-8-17--1.16470258349474-1.02063122982878	chr16	24448069	24448479	+	0	NA	promoter-TSS (NM_001145952)	promoter-TSS (NM_001145952)	97	NM_001145952	210126	Mm.209385	NM_178665	ENSMUSG00000033306	Lpp	9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16	LIM domain containing preferred translocation partner in lipoma	protein-coding
common_peak1-18381-92-128-0.0811248282795107-0.353679810596352	chr8	70697854	70700518	+	0	NA	Intergenic	RLTR25A|LTR|ERVK	-101241	NM_028182	72281	Mm.40974	NM_028182	ENSMUSG00000053886	Sh2d4a	2210402M20Rik|SH2A	SH2 domain containing 4A	protein-coding
common_peak2-22221-8-11--0.579740082773585-1.14218153353838	chr12	112951982	112952433	+	0	NA	promoter-TSS (NM_027404)	promoter-TSS (NM_027404)	727	NM_026511	68020	Mm.425762	NM_026511	ENSMUSG00000037787	Apopt1	1700081D05Rik|2810002N01Rik|Apop-1|Apop1	apoptogenic, mitochondrial 1	protein-coding
common_peak1-11757-50-66--0.0251488739788197-0.30102999566397	chr16	38087639	38088911	+	0	NA	promoter-TSS (NM_019827)	promoter-TSS (NM_019827)	-812	NM_019827	56637	Mm.394930	NM_019827	ENSMUSG00000022812	Gsk3b	7330414F15Rik|8430431H08Rik|C86142|GSK-3|GSK-3beta|GSK3	glycogen synthase kinase 3 beta	protein-coding
common_peak2-25778-57-45-0.742471084021916-2.14513908252199	chr19	32756986	32758620	+	0	NA	intron (NM_026487, intron 8 of 9)	B2_Mm2|SINE|B2	28985	NM_026487	67979	Mm.27123	NM_026487	ENSMUSG00000013662	Atad1	4921525H23Rik|AW107648|Thorase	ATPase family, AAA domain containing 1	protein-coding
common_peak1-15840-88-90-0.507617768971836-1.81723637423224	chr5	146832294	146833860	+	0	NA	Intergenic	Intergenic	-11883	NR_030782	56388	Mm.301900	NM_019792	ENSMUSG00000029630	Cyp3a25	AI327008	cytochrome P450, family 3, subfamily a, polypeptide 25	protein-coding
unique_peak2-37294-7-10--0.660340788339108-1.12966497611638	chr4	119195374	119195732	+	0	NA	Intergenic	Intergenic	15821	NM_001004178	433752	Mm.425205	NM_001004178	ENSMUSG00000087385	AA415398	-	expressed sequence AA415398	protein-coding
common_peak1-17496-7-12--0.901348887842903-1.31827279259406	chr7	25249196	25249679	+	0	NA	intron (NM_011113, intron 1 of 6)	intron (NM_011113, intron 1 of 6)	1918	NM_011113	18793	Mm.1359	NM_011113	ENSMUSG00000046223	Plaur	Cd87|u-PAR|uPAR	plasminogen activator, urokinase receptor	protein-coding
unique_peak2-35812-2-8--2.08737925770563-1.65811743852845	chr18	62708289	62708783	+	0	NA	promoter-TSS (NM_177829)	promoter-TSS (NM_177829)	-29	NM_177829	328971	Mm.312675	NM_177829	ENSMUSG00000044176	Spink10	A230091H23Rik	serine peptidase inhibitor, Kazal type 10	protein-coding
unique_peak1-742-8-4-0.683294323060208-1.21878474469819	chr10	111390387	111390847	+	0	NA	Intergenic	Intergenic	-19134	NM_178610	52705	Mm.34606	NM_178610	ENSMUSG00000063334	Krr1	2610511F02Rik|AI255219|AI428520|D10Ertd773e|Hrb2	KRR1, small subunit (SSU) processome component, homolog (yeast)	protein-coding
common_peak1-13515-114-137-0.355430064930198-1.41052498563211	chr2	112491581	112493877	+	0	NA	exon (NM_177652, exon 89 of 104)	exon (NM_177652, exon 89 of 104)	92890	NM_001165935	74268	Mm.315125	NM_028844		Aven	1700013A01Rik|1700056A21Rik|mAven-L|mAven-S	apoptosis, caspase activation inhibitor	protein-coding
common_peak2-22121-21-27--0.237865656791368-0.339372226903478	chr12	84218217	84219297	+	0	NA	intron (NM_001282061, intron 15 of 16)	intron (NM_001282061, intron 15 of 16)	-178615	NR_046045	74283	Mm.398247	NR_046045		1700085C21Rik	-	RIKEN cDNA 1700085C21 gene	ncRNA
common_peak2-31406-12-25--1.05166373305345-1.1381569562463	chr8	92355593	92356390	+	0	NA	Intergenic	Intergenic	516160	NM_172913	244579	Mm.302755	NM_172913	ENSMUSG00000043668	Tox3	500-9|BC052044|C230068E13|CAGF9|Tnrc9	TOX high mobility group box family member 3	protein-coding
common_peak2-29668-40-40-0.301423678133014-0.590471533980013	chr6	72276807	72278136	+	0	NA	intron (NM_138592, intron 9 of 12)	RSINE1|SINE|B4	17698	NM_138592	28035	Mm.281900	NM_138592	ENSMUSG00000056305	Usp39	AA408960|AI894154|CGI-21|D6Wsu157e|SAD1	ubiquitin specific peptidase 39	protein-coding
unique_peak2-33829-3-9--1.73591118484664-1.57096726280955	chr12	8786158	8786576	+	0	NA	intron (NM_011519, intron 1 of 4)	intron (NM_011519, intron 1 of 4)	8165	NM_011519	20969	Mm.2580	NM_011519	ENSMUSG00000020592	Sdc1	AA408134|AA409076|CD138|Sstn|Synd|Synd1|syn-1	syndecan 1	protein-coding
common_peak2-30827-20-13-0.680719862533589-0.809260849721102	chr7	130756721	130757275	+	0	NA	Intergenic	L1Md_A|LINE|L1	-113035	NM_001081329	210162	Mm.135397	NM_175435	ENSMUSG00000030757	Zkscan2	9430065N20Rik|AW493225|Zfp694	zinc finger with KRAB and SCAN domains 2	protein-coding
common_peak1-16991-16-27--0.689091279789542-0.798885335210229	chr6	87913921	87914659	+	0	NA	Intergenic	CT-rich|Low_complexity|Low_complexity	17186	NM_198622	243529	Mm.33796	NM_198622	ENSMUSG00000044927	H1fx	Gm461|H1X	H1 histone family, member X	protein-coding
common_peak1-14312-10-9-0.0344872501214071-1.05503135781948	chr2	163344670	163345282	+	0	NA	intron (NR_027970, intron 1 of 3)	MT2_Mm|LTR|ERVL	22481	NR_027970	68314	Mm.46190	NM_197983	ENSMUSG00000046840	Hnf4aos	0610008F07Rik	hepatic nuclear factor 4 alpha, opposite strand	ncRNA
common_peak2-24480-15-25--0.688274967585436-0.73354163167379	chr17	24695557	24696657	+	0	NA	intron (NM_013630, intron 1 of 45)	intron (NM_013630, intron 1 of 45)	9212	NM_013630	18763	Mm.30435	NM_013630	ENSMUSG00000032855	Pkd1	PC1|mFLJ00285	polycystic kidney disease 1 homolog	protein-coding
unique_peak2-33050-2-6--1.72480917832092-1.26211192963361	chr10	75648786	75649139	+	0	NA	intron (NM_133184, intron 13 of 14)	intron (NM_133184, intron 13 of 14)	21192	NR_030443	751554		NR_030443	miRBase:MI0004635	Mir678	Mirn678|mmu-mir-678	microRNA 678	ncRNA
common_peak2-19910-15-21--0.447266868081641-0.448200956659578	chr1	119648307	119648942	+	0	NA	Intergenic	Intergenic	559085	NM_011650	22099	Mm.426637	NM_011650	ENSMUSG00000026374	Tsn	2610034C24Rik|AU040286|C3PO|TB-RBP	translin	protein-coding
common_peak1-18300-44-33-0.734429993318196-1.70773054518537	chr8	45974786	45975877	+	0	NA	Intergenic	Intergenic	-60231	NM_001081286	14107	Mm.27365	NM_001081286	ENSMUSG00000070047	Fat1	2310038E12Rik|AU023433|Fath|mFat1	FAT tumor suppressor homolog 1 (Drosophila)	protein-coding
common_peak1-12477-9-18--1.05831410703937-0.965105923112245	chr17	84187516	84187983	+	0	NA	intron (NM_054082, intron 11 of 16)	intron (NM_054082, intron 11 of 16)	58381	NM_025325	107766	Mm.30100	NM_025325	ENSMUSG00000000673	Haao	0610007K21Rik|0610012J07Rik|3-HAO|3-HAOxase|3HAO	3-hydroxyanthranilate 3,4-dioxygenase	protein-coding
common_peak1-12286-32-31-0.27909201921966-0.499999074040591	chr17	45572275	45573388	+	0	NA	Intergenic	Intergenic	-2175	NM_152810	71702	Mm.28270	NM_152810	ENSMUSG00000023932	Cdc5l	1200002I02Rik|AA408004|PCDC5RP	cell division cycle 5-like (S. pombe)	protein-coding
unique_peak1-2432-8-5-0.420259917226415-1.10484139239135	chr15	101325954	101326477	+	0	NA	Intergenic	ORR1E|LTR|MaLR	-4272	NM_001201323	100126226	Mm.347934	NM_001201323	ENSMUSG00000067613	5430421N21Rik	-	RIKEN cDNA 5430421N21 gene	protein-coding
common_peak1-16645-119-124-0.572653636467957-3.01190014752321	chr6	87849992	87851680	+	0	NA	intron (NM_017477, intron 13 of 23)	B3|SINE|B2	12870	NM_201244	54161	Mm.258785	NM_017477	ENSMUSG00000030058	Copg1	AU019265|BC056168|Copg|D6Ertd71e|D6Wsu16e	coatomer protein complex, subunit gamma 1	protein-coding
common_peak1-13584-12-9-0.326847890200276-0.459837087125828	chr2	13976583	13977172	+	0	NA	intron (NM_001012396, intron 1 of 5)	CpG	785	NM_001012396	30963	Mm.241205	NM_013935	ENSMUSG00000063275	Ptpla	HACD1	protein tyrosine phosphatase-like (proline instead of catalytic arginine), member a	protein-coding
common_peak1-10650-11-15--0.491306415748387-0.435191258261915	chr14	47367152	47367903	+	0	NA	Intergenic	L1Md_T|LINE|L1	-12689	NM_028222	72391	Mm.272394	NM_028222	ENSMUSG00000037628	Cdkn3	2410006H10Rik|KAP	cyclin-dependent kinase inhibitor 3	protein-coding
common_peak1-16265-41-36-0.49169533921971-0.936258361511365	chr5	107900398	107901503	+	0	NA	intron (NM_001255991, intron 5 of 8)	intron (NM_001255991, intron 5 of 8)	-25814	NM_001007574	231570	Mm.261891	NM_001007574	ENSMUSG00000044060	A830010M20Rik	AI849226|Kiaa1107|mKIAA1107	RIKEN cDNA A830010M20 gene	protein-coding
unique_peak2-37584-5-5--0.289342836727009-0.909929411522249	chr5	36988557	36988900	+	0	NA	intron (NM_001081232, intron 2 of 7)	intron (NM_001081232, intron 2 of 7)	-59853	NM_001113362	100855	Mm.486203	NM_133910	ENSMUSG00000029192	Tbc1d14	2810413P16Rik|AU043625|C86258|D5Ertd110e|mKIAA1322	TBC1 domain family, member 14	protein-coding
common_peak2-20637-11-6-0.701338662194009-1.32595962126035	chr10	80679849	80680396	+	0	NA	intron (NM_178662, intron 3 of 12)	B2_Mm2|SINE|B2	13402	NM_178662	16467	Mm.127681	NM_178662	ENSMUSG00000034958	Atcay	3322401A10Rik|BB077577|BNIP-H|CLAC|hes|ji	ataxia, cerebellar, Cayman type homolog (human)	protein-coding
common_peak1-13592-47-73--0.274611940862402-0.534695158203301	chr2	18027401	18028765	+	0	NA	intron (NR_045538, intron 4 of 22)	intron (NR_045538, intron 4 of 22)	41871	NM_001252561	17354	Mm.209175	NM_010804	ENSMUSG00000026743	Mllt10	Af10|B130021D15Rik|D630001B22Rik|mKIAA4140	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	protein-coding
common_peak1-13964-25-29--0.0450406902634128-0.301029995663982	chr2	92677933	92679094	+	0	NA	Intergenic	Intergenic	-76745	NM_030725	80976	Mm.33490	NM_030725	ENSMUSG00000027220	Syt13	5730409J20Rik|AI549909|mKIAA1427	synaptotagmin XIII	protein-coding
common_peak2-27755-13-48--1.83623781347744-4.58197687146261	chr3	127895743	127896451	+	0	NA	intron (NR_045704, intron 2 of 5)	intron (NR_045704, intron 2 of 5)	38426	NR_045704	402774	Mm.209170	NR_045704		D030025E07Rik	-	RIKEN cDNA D030025E07 gene	ncRNA
common_peak2-26789-8-7-0.00522241794757061-1.00793137938329	chr2	148015138	148015483	+	0	NA	Intergenic	Intergenic	-142605	NM_010446	15376	Mm.938	NM_010446	ENSMUSG00000037025	Foxa2	HNF3-beta|HNF3beta|Hnf-3b|Hnf3b|Tcf-3b|Tcf3b	forkhead box A2	protein-coding
common_peak1-12408-39-96--0.984151595267974-3.66966533606566	chr17	72836495	72837671	+	0	NA	intron (NM_007439, intron 1 of 28)	intron (NM_007439, intron 1 of 28)	116564	NM_007439	11682	Mm.311854	NM_007439	ENSMUSG00000055471	Alk	CD246|Tcrz	anaplastic lymphoma kinase	protein-coding
common_peak2-27005-12-12--0.0516637330534535-0.309718203022949	chr2	172439804	172440409	+	0	NA	Intergenic	Intergenic	63615	NM_001159696	21420	Mm.3629	NM_009335	ENSMUSG00000028640	Tfap2c	AA409384|AP2gamma|Ap-2.2|Stra2|Tcfap2c	transcription factor AP-2, gamma	protein-coding
unique_peak1-5418-6-0-2.5653981103803-2.10720996964787	chr5	112118891	112119294	+	0	NA	Intergenic	Intergenic	71656	NR_045832	269683	Mm.136946	NM_207252	ENSMUSG00000085271	E130006D01Rik	Gm16018|Gm681|OTTMUSG00000029083	RIKEN cDNA E130006D01 gene	ncRNA
common_peak2-29163-3-9--1.73591118484664-1.57096726280955	chr5	130254036	130254511	+	0	NA	intron (NM_008095, intron 7 of 9)	intron (NM_008095, intron 7 of 9)	23323	NM_008095	14467	Mm.12468	NM_008095	ENSMUSG00000029432	Gbas	AV006093|Nipsnap2	glioblastoma amplified sequence	protein-coding
common_peak2-20013-14-10-0.439784541720347-0.519648556297791	chr1	135466279	135467022	+	0	NA	Intergenic	B1_Mur2|SINE|Alu	40207	NM_009227	20643	Mm.249110	NM_009227	ENSMUSG00000090553	Snrpe	AL022645|C76690|SME	small nuclear ribonucleoprotein E	protein-coding
common_peak1-17802-10-19--0.965512749878593-0.917676348953458	chr7	100285434	100286036	+	0	NA	Intergenic	Lx3_Mus|LINE|L1	57346	NM_021427	58238	Mm.113787	NM_021427		Fam181b	A830059I20Rik|AB041569	family with sequence similarity 181, member B	protein-coding
common_peak2-25058-77-72-0.59470202067598-2.03663170368108	chr18	34220370	34221614	+	0	NA	Intergenic	Intergenic	-54132	NM_013512	13824	Mm.3465	NM_013512	ENSMUSG00000024376	Epb4.1l4a	Epb4.1l4|Epb41l4a|NBL4	erythrocyte protein band 4.1-like 4a	protein-coding
common_peak1-19075-10-9-0.0344872501214071-1.05503135781948	chr9	70241647	70242151	+	0	NA	intron (NM_181072, intron 26 of 27)	intron (NM_181072, intron 26 of 27)	11661	NR_049200	100885839		NR_049200	miRBase:MI0019195	Mir5626	mmu-mir-5626	microRNA mir-5626	ncRNA
common_peak1-10632-10-7-0.356415345008769-1.12966497611638	chr14	41019007	41019601	+	0	NA	Intergenic	L1Md_F2|LINE|L1	550353	NR_045936	73591	Mm.65499	NR_045936		1700109I08Rik	-	RIKEN cDNA 1700109I08 gene	ncRNA
common_peak1-16304-9-9--0.132314688483142-1.03275496310833	chr5	114357527	114358016	+	0	NA	intron (NM_011779, intron 1 of 10)	intron (NM_011779, intron 1 of 10)	944	NM_011779	23790	Mm.260158	NM_011779	ENSMUSG00000004530	Coro1c	AL022675|AW455561|AW548837	coronin, actin binding protein 1C	protein-coding
common_peak2-21679-90-98-0.424948405862542-1.45701530544528	chr11	103697101	103698393	+	0	NA	intron (NM_008740, intron 17 of 20)	intron (NM_008740, intron 17 of 20)	62258	NM_009521	22415	Mm.159091	NM_009521	ENSMUSG00000000125	Wnt3	Int-4|Wnt-3	wingless-type MMTV integration site family, member 3	protein-coding
common_peak1-18136-17-9-0.896368243317676-1.09394599973099	chr8	10865048	10865732	+	0	NA	Intergenic	Intergenic	17064	NR_040705	320014	Mm.403203	NR_040705		B930025P03Rik	-	RIKEN cDNA B930025P03 gene	ncRNA
common_peak2-23811-81-116-0.0016848834251606-0.301961960932715	chr15	100615588	100616698	+	0	NA	intron (NM_021530, intron 5 of 24)	intron (NM_021530, intron 5 of 24)	23965	NM_021530	59033	Mm.209856	NM_021530	ENSMUSG00000023032	Slc4a8	AW493845|C230026C11|NDCBE|kNBC-3	solute carrier family 4 (anion exchanger), member 8	protein-coding
common_peak2-20666-37-62--0.451286852014098-0.817648941027521	chr10	84533378	84534755	+	0	NA	Intergenic	Intergenic	31174	NM_010214	14202	Mm.46163	NM_010214	ENSMUSG00000050035	Fhl4	-	four and a half LIM domains 4	protein-coding
common_peak1-19063-8-5-0.420259917226415-1.10484139239135	chr9	69442141	69442665	+	0	NA	Intergenic	L1Md_F2|LINE|L1	137652	NR_037296	100526560		NR_037296	miRBase:MI0014106	Mir3109	mmu-mir-3109	microRNA 3109	ncRNA
unique_peak1-3227-7-4-0.477162735410827-1.09384600808989	chr18	60700208	60700609	+	0	NA	intron (NM_026302, intron 3 of 12)	intron (NM_026302, intron 3 of 12)	14533	NM_026302	67665	Mm.272801	NM_026302	ENSMUSG00000024603	Dctn4	1110001K06Rik|4930547K17Rik|C130039E17Rik|p62	dynactin 4	protein-coding
common_peak2-27443-15-21--0.447266868081641-0.448200956659578	chr3	89998743	89999584	+	0	NA	intron (NM_029937, intron 32 of 39)	intron (NM_029937, intron 32 of 39)	18406	NM_001190258	100043813	Mm.270283	NM_001190258	ENSMUSG00000050621	Rps27rt	ENSMUSG00000050621|Gm9846|Rps27l2	ribosomal protein S27, retrogene	protein-coding
common_peak1-18213-9-8-0.0196884049619079-1.03275496310833	chr8	24974819	24975344	+	0	NA	intron (NM_001277239, intron 4 of 7)	intron (NM_001277239, intron 4 of 7)	194948	NM_177086	320158	Mm.121274	NM_177086	ENSMUSG00000037492	Zmat4	9630048M01Rik	zinc finger, matrin type 4	protein-coding
common_peak2-27494-4-7--1.02346051385325-1.09384600808989	chr3	94838485	94838919	+	0	NA	exon (NM_001282017, exon 6 of 10)	exon (NM_001282017, exon 6 of 10)	7834	NM_001282017	19185	Mm.2261	NM_008951	ENSMUSG00000005625	Psmd4	Af1|Mcb1|angiocidin	proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	protein-coding
common_peak1-16326-22-12-0.946844386946312-1.31435121412491	chr5	116008891	116009970	+	0	NA	promoter-TSS (NM_007475)	promoter-TSS (NM_007475)	-46	NM_007475	11837	Mm.5286	NM_007475	ENSMUSG00000067274	Rplp0	36B4|Arbp|L10E	ribosomal protein, large, P0	protein-coding
unique_peak2-36914-3-6--1.22133801201688-1.08602067057793	chr3	98266121	98266520	+	0	NA	Intergenic	L1Md_F|LINE|L1	48075	NM_001111336	15495	Mm.14309	NM_008294	ENSMUSG00000095143	Hsd3b4	-	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 4	protein-coding
common_peak1-18614-37-29-0.6191024758773-1.14508711250721	chr8	107488749	107489927	+	0	NA	intron (NM_197999, intron 5 of 11)	B4A|SINE|B4	3720	NM_197999	72361	Mm.26580	NM_197999	ENSMUSG00000031877	Ces2g	2210023G05Rik|Ces2l	carboxylesterase 2G	protein-coding
unique_peak1-4966-9-3-1.18961340640422-1.57096726280955	chr4	105845894	105846573	+	0	NA	Intergenic	Intergenic	-142585	NM_183225	329908	Mm.234544	NM_183225	ENSMUSG00000028514	Usp24	2700066K03Rik|2810030C21Rik|AI414051|B130021E18|C79851	ubiquitin specific peptidase 24	protein-coding
common_peak2-26712-134-201-0.0863580260276304-0.389473098942902	chr2	128966660	128968446	+	0	NA	Intergenic	HAL1-2a_MD|LINE|L1	12117	NM_025395	66170	Mm.40621	NM_025395	ENSMUSG00000037938	Chchd5	1110027L01Rik|AW045710	coiled-coil-helix-coiled-coil-helix domain containing 5	protein-coding
common_peak2-19567-11-7-0.508693584251613-1.21681515183528	chr1	10256653	10257018	+	0	NA	Intergenic	Intergenic	-34084	NM_001102430	211673	Mm.229141	NM_001102430	ENSMUSG00000067851	Arfgef1	ARFGEP1|BIG1|D130059B05Rik|D730028O18Rik|P200	ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited)	protein-coding
unique_peak2-34334-0-4--3.16205902536157-1.10720996964787	chr13	98533773	98534015	+	0	NA	Intergenic	Intergenic	203939	NR_046157	328314	Mm.138047	NR_046157		Gm5086	B230311A21|EG328314	predicted gene 5086	ncRNA
unique_peak2-38247-4-7--1.02346051385325-1.09384600808989	chr6	124487904	124488303	+	0	NA	intron (NM_144938, intron 4 of 11)	Lx8|LINE|L1	4236	NM_144938	50908	Mm.219527	NM_144938	ENSMUSG00000038521	C1s1	AA959438|AI255193|AI327365|C1s|C1sa	complement component 1, s subcomponent 1	protein-coding
common_peak1-19289-9-14--0.717277189204299-0.53895475198017	chr9	120011179	120011784	+	0	NA	Intergenic	A-rich|Low_complexity|Low_complexity	-8036	NM_144793	208638	Mm.236656	NM_144793	ENSMUSG00000032519	Slc25a38	AV019094|BC010801	solute carrier family 25, member 38	protein-coding
common_peak2-20774-36-76--0.787465454527147-2.04502579594583	chr10	117375735	117377024	+	0	NA	intron (NR_045342, intron 3 of 3)	intron (NR_045342, intron 3 of 3)	13864	NR_045342	71067	Mm.410793	NR_045342		4933411E08Rik	-	RIKEN cDNA 4933411E08 gene	ncRNA
unique_peak1-6054-11-2-1.92373108353046-2.32232533660526	chr6	115541407	115541901	+	0	NA	intron (NM_001101431, intron 1 of 3)	B1F|SINE|Alu	940	NM_001101431	70291	Mm.133694	NM_001101431		Mkrn2os	2510049J12Rik	makorin, ring finger protein 2, opposite strand	protein-coding
unique_peak2-37619-8-12--0.695217300193522-0.475924844171029	chr5	65435168	65435716	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	73885	NR_030577	100124451		NR_030577	miRBase:MI0005518	Mir574	Mirn574|mmu-mir-574	microRNA 574	ncRNA
unique_peak1-942-7-3-0.799090830298189-1.23214870625617	chr11	54934798	54935290	+	0	NA	Intergenic	GA-rich|Low_complexity|Low_complexity	23557	NM_010299	14667	Mm.287807	NM_010299	ENSMUSG00000000594	Gm2a	AA408702|AW215435|GM2-AP|SAP-3	GM2 ganglioside activator protein	protein-coding
common_peak2-30422-6-9--0.75652998450706-1.11707584880836	chr7	41599271	41599729	+	0	NA	Intergenic	Intergenic	-2286288	NM_001013810	434171	Mm.60990	NM_001013810	ENSMUSG00000060565	Gm5591	EG434171	predicted gene 5591	protein-coding
unique_peak1-6185-13-2-2.19350952991661-3.03832868024006	chr6	146946031	146946669	+	0	NA	intron (NM_001170433, intron 8 of 27)	intron (NM_001170433, intron 8 of 27)	-34709	NM_025620	66532	Mm.45888	NM_025620	ENSMUSG00000040121	Rep15	2210417D09Rik	RAB15 effector protein	protein-coding
unique_peak1-5846-8-0-3.00522241794757-2.70926996097583	chr6	82858387	82858835	+	0	NA	Intergenic	Intergenic	-26764	NR_040520	69652	Mm.96357	NR_040520		2310069B03Rik	-	RIKEN cDNA 2310069B03 gene	ncRNA
common_peak1-9450-30-21-0.710243790854576-1.16836819221353	chr11	103101051	103102305	+	0	NA	intron (NM_016896, intron 3 of 15)	intron (NM_016896, intron 3 of 15)	-21932	NM_177801	328019	Mm.189646	NM_177801	ENSMUSG00000044787	Spata32	4933400C05Rik|VAD1.2	spermatogenesis associated 32	protein-coding
unique_peak2-33737-8-8--0.164702583494742-1.00793137938329	chr11	116166794	116167186	+	0	NA	intron (NM_016857, intron 2 of 19)	intron (NM_016857, intron 2 of 19)	1062	NM_016857	53413	Mm.22530	NM_016857	ENSMUSG00000020792	Exoc7	Exo70|sec70	exocyst complex component 7	protein-coding
unique_peak1-3520-10-1-2.35641534500877-2.57096726280955	chr19	17455894	17456479	+	0	NA	Intergenic	Intergenic	-8852	NM_010265	14537	Mm.244825	NM_010265	ENSMUSG00000038843	Gcnt1	5630400D21Rik|B130048E03|C2 GlcNAcT|C2GNT|IGnT	glucosaminyl (N-acetyl) transferase 1, core 2	protein-coding
unique_peak2-34707-0-6--3.64748585253182-1.56314192529759	chr15	32245617	32245843	+	0	NA	intron (NM_009154, intron 1 of 22)	intron (NM_009154, intron 1 of 22)	71162	NM_009154	20356	Mm.260374	NM_009154	ENSMUSG00000022231	Sema5a	5930434A13|9130201M22Rik|AI464145|Semaf|semF	sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A	protein-coding
common_peak2-26780-39-36-0.406307881290203-0.734468890407008	chr2	144527468	144528297	+	0	NA	intron (NM_025314, intron 4 of 5)	MTE2b|LTR|MaLR	102193	NM_025314	66044	Mm.28109	NM_025314	ENSMUSG00000027430	Dtd1	0610006H08Rik|DUE-B|Hars2	D-tyrosyl-tRNA deacylase 1	protein-coding
unique_peak2-35448-2-5--1.50241675698448-1.08602067057793	chr17	35635807	35636168	+	0	NA	Intergenic	Intergenic	-6990	NM_013633	18999	Mm.17031	NM_013633	ENSMUSG00000024406	Pou5f1	NF-A3|Oct-3|Oct-3/4|Oct-4|Oct3|Oct3/4|Oct4|Otf-3|Otf-4|Otf3|Otf3-rs7|Otf3g|Otf4	POU domain, class 5, transcription factor 1	protein-coding
unique_peak1-2153-8-4-0.683294323060208-1.21878474469819	chr15	59145737	59146185	+	0	NA	promoter-TSS (NM_009270)	promoter-TSS (NM_009270)	-686	NM_009270	20775	Mm.296169	NM_009270	ENSMUSG00000022351	Sqle	AI323792	squalene epoxidase	protein-coding
unique_peak1-392-11-0-3.50869358425161-3.61235994796777	chr1	153301069	153301713	+	0	NA	intron (NM_026876, intron 12 of 14)	PB1D10|SINE|Alu	11868	NR_106150	102466847		NR_106150		Mir7682	mmu-mir-7682	microRNA mir-7682	ncRNA
unique_peak2-39738-5-8--0.874305337448166-1.10484139239135	chr9	123259369	123259884	+	0	NA	Intergenic	MTD|LTR|MaLR	-16432	NM_153168	102436	Mm.276076	NM_153168	ENSMUSG00000035202	Lars2	AI035546|Kiaa0028|LEURS	leucyl-tRNA synthetase, mitochondrial	protein-coding
unique_peak1-4867-10-2-1.77145284428761-2.09384600808989	chr4	11098265	11098721	+	0	NA	3' UTR (NM_001199105, exon 5 of 5)	3' UTR (NM_001199105, exon 5 of 5)	14905	NM_021897	60599	Mm.393018	NM_021897	ENSMUSG00000028211	Trp53inp1	2700057G22Rik|SIP|SIP18|SIP27|Stinp|Teap	transformation related protein 53 inducible nuclear protein 1	protein-coding
common_peak1-12698-30-28-0.311694414364301-0.518746288394487	chr18	42274749	42276020	+	0	NA	intron (NM_001146299, intron 4 of 8)	MER113|DNA|MER1_type	62020	NM_001146299	269016	Mm.45472	NM_172966	ENSMUSG00000057719	Sh3rf2	2310046K19|9130023G24Rik|AI452083|Ppp1r39|RNF158	SH3 domain containing ring finger 2	protein-coding
unique_peak1-4551-7-0-2.79909083029819-2.40823996531185	chr3	40694499	40694983	+	0	NA	Intergenic	IAPLTR2_Mm|LTR|ERVK	-3458	NM_026622	269423	Mm.32373	NM_026622	ENSMUSG00000037818	3110057O12Rik	2310068E01Rik|4732404H23|AI645591	RIKEN cDNA 3110057O12 gene	protein-coding
common_peak1-12260-36-48--0.135388757947454-0.322047890816902	chr17	36957911	36959266	+	0	NA	Intergenic	Intergenic	9468	NM_201611	399549	Mm.329034	NM_201611	ENSMUSG00000037130	H2-M10.6	-	histocompatibility 2, M region locus 10.6	protein-coding
common_peak1-12461-28-26-0.298071617657994-0.481798116163919	chr17	84044420	84045574	+	0	NA	Intergenic	Intergenic	-13762	NM_153512	225030	Mm.223506	NM_153512	ENSMUSG00000045053	Kcng3	KV6.3|Kv10.1a|Kv10.1b	potassium voltage-gated channel, subfamily G, member 3	protein-coding
unique_peak2-35573-2-8--2.08737925770563-1.65811743852845	chr17	70839091	70839540	+	0	NA	intron (NM_027712, intron 1 of 9)	intron (NM_027712, intron 1 of 9)	-32135	NM_001128180	224997	Mm.311840	NM_027712	ENSMUSG00000003279	Dlgap1	4933422O14Rik|9630002F18|AI845682|AI848168|BB075781|D17Bwg0511e|GKAP/SAPAP|GKPA/SAPAP|Gkap|Sapap1|mKIAA4162	discs, large (Drosophila) homolog-associated protein 1	protein-coding
common_peak2-28336-20-19-0.16614668970383-0.348739088570342	chr4	134853445	134853975	+	0	NA	Intergenic	Intergenic	-25035	NM_013885	29876	Mm.257765	NM_013885	ENSMUSG00000037242	Clic4	D0Jmb3|TU-74|mc3s5|mtCLIC	chloride intracellular channel 4 (mitochondrial)	protein-coding
unique_peak1-481-16-3-2.11826364226806-2.65002542325363	chr1	177555584	177556231	+	0	NA	promoter-TSS (NM_010209)	promoter-TSS (NM_010209)	-141	NM_010209	14194	Mm.41502	NM_010209		Fh1	Fh|Fh-1	fumarate hydratase 1	protein-coding
common_peak1-11769-47-66--0.131247765691224-0.343786565003198	chr16	44139078	44140478	+	0	NA	promoter-TSS (NM_007508)	promoter-TSS (NM_007508)	-144	NM_028108	72117	Mm.278726	NM_028108	ENSMUSG00000022698	Naa50	2600005K24Rik|2810441M03Rik|AW112078|Mak3|Mak3p|Nat13|Nat5|San	N(alpha)-acetyltransferase 50, NatE catalytic subunit	protein-coding
common_peak1-9009-56-52-0.507675370876044-1.21053550697015	chr11	60536022	60537926	+	0	NA	intron (NM_022009, intron 3 of 29)	intron (NM_022009, intron 3 of 29)	3749	NM_022009	14248	Mm.339755	NM_022009	ENSMUSG00000002812	Flii	3632430F08Rik|Fli1|Fliih	flightless I homolog (Drosophila)	protein-coding
common_peak2-27401-17-19--0.103631756682325-0.301029995663974	chr3	88333607	88334626	+	0	NA	Intergenic	Intergenic	-2201	NM_001029890	72640	Mm.275154	NM_001029890	ENSMUSG00000074480	Mex3a	2700083E18Rik|Gm411|Rkhd4	mex3 homolog A (C. elegans)	protein-coding
common_peak1-11225-10-9-0.0344872501214071-1.05503135781948	chr15	79326139	79326631	+	0	NA	intron (NM_008427, intron 1 of 1)	intron (NM_008427, intron 1 of 1)	9286	NM_008427	16520	Mm.140760	NM_008427	ENSMUSG00000044216	Kcnj4	IRK3|Kcnf2|MB-IRK3	potassium inwardly-rectifying channel, subfamily J, member 4	protein-coding
common_peak2-30080-8-7-0.00522241794757061-1.00793137938329	chr6	134640970	134641377	+	0	NA	intron (NM_026371, intron 3 of 3)	RLTR10-int|LTR|ERVK	50215	NM_026371	67774	Mm.41892	NM_026371	ENSMUSG00000042992	Loh12cr1	5830457J20Rik|AW124643	loss of heterozygosity, 12, chromosomal region 1 homolog (human)	protein-coding
common_peak1-18791-13-15--0.221527969362231-0.308519316180257	chr9	31211202	31211847	+	0	NA	intron (NM_172766, intron 16 of 25)	B1F1|SINE|Alu	17747	NM_172766	235134	Mm.238146	NM_172766	ENSMUSG00000042185	Nfrkb	A530090G11Rik	nuclear factor related to kappa B binding protein	protein-coding
unique_peak2-35551-7-8--0.370834171144123-1.00793137938329	chr17	63849242	63849683	+	0	NA	5' UTR (NM_015794, exon 1 of 9)	5' UTR (NM_015794, exon 1 of 9)	467	NM_015794	50758	Mm.136366	NM_015794		Fbxl17	6330576B01Rik|AI452053|BB073797|C130023C01Rik|Fbx13|Fbxo13	F-box and leucine-rich repeat protein 17	protein-coding
common_peak1-19459-26-23-0.342936591437306-0.502376547007663	chrX	104413358	104414345	+	0	NA	Intergenic	Intergenic	-37366	NM_001177781	213439	Mm.383562	NM_001033251	ENSMUSG00000073008	Gpr174	Gm376|Lypsr3	G protein-coupled receptor 174	protein-coding
common_peak1-17835-132-176-0.250842641999867-0.989322458409449	chr7	110060418	110062597	+	0	NA	Intergenic	Intergenic	-3156	NM_147085	259089	Mm.377834	NM_147085	ENSMUSG00000043310	Olfr571	MOR21-1	olfactory receptor 571	protein-coding
unique_peak2-33204-3-5--0.998945590680433-0.96108193396963	chr10	111622991	111623413	+	0	NA	intron (NM_178278, intron 7 of 16)	L2a|LINE|L2	20470	NM_178278	353025	Mm.194428	NM_178278	ENSMUSG00000035694	Caps2	D630005B03Rik	calcyphosphine 2	protein-coding
common_peak2-20349-56-100--0.422615657312551-1.07921547113662	chr10	8885599	8887123	+	0	NA	Intergenic	Intergenic	-280493	NM_175155	70097	Mm.338275	NM_175155	ENSMUSG00000015305	Sash1	1100001C18Rik|2500002E12Rik|A330076K04Rik|mKIAA0790	SAM and SH3 domain containing 1	protein-coding
common_peak1-17445-14-14--0.00767443525087419-0.308519316180257	chr7	16402298	16402938	+	0	NA	Intergenic	IAPEY3-int|LTR|ERVK	22410	NM_145710	252830	Mm.25863	NM_145710	ENSMUSG00000041583	Obox6	D17Ertd599e	oocyte specific homeobox 6	protein-coding
unique_peak2-32718-2-5--1.50241675698448-1.08602067057793	chr1	156523981	156524182	+	0	NA	intron (NM_009782, intron 3 of 46)	intron (NM_009782, intron 3 of 46)	48969	NM_009782	12290	Mm.267517	NM_009782	ENSMUSG00000004110	Cacna1e	A430040I15|BII|Cach6|Cacnl1a6|Cav2.3|Cchra1|alpha1E	calcium channel, voltage-dependent, R type, alpha 1E subunit	protein-coding
unique_peak1-2656-13-4-1.45654393575041-2.23384849113406	chr16	52096334	52097002	+	0	NA	intron (NM_001033238, intron 3 of 17)	intron (NM_001033238, intron 3 of 17)	65006	NM_001033238	208650	Mm.328206	NM_001033238	ENSMUSG00000022637	Cblb	AI429560|AI851073|Cbl-b	Casitas B-lineage lymphoma b	protein-coding
common_peak1-8741-29-36--0.0971632850138393-0.304088508634286	chr11	3963545	3964444	+	0	NA	promoter-TSS (NM_001029937)	promoter-TSS (NM_001029937)	-862	NM_001029937	380683	Mm.296806	NM_001029937		Sec14l3	1110069O07Rik	SEC14-like 3 (S. cerevisiae)	protein-coding
common_peak2-23285-70-116--0.250397803208006-0.63018373921618	chr15	28023854	28026123	+	0	NA	Intergenic	Intergenic	-69385	NM_001081302	223435	Mm.485422	NM_001081302	ENSMUSG00000022263	Trio	6720464I07Rik|AA408740|Solo	triple functional domain (PTPRF interacting)	protein-coding
unique_peak2-34733-10-10--0.103016273628528-0.301029995663987	chr15	38431427	38431971	+	0	NA	intron (NM_018745, intron 2 of 11)	B4A|SINE|B4	-11397	NR_105916	102465574		NR_105916		Mir6951	mmu-mir-6951	microRNA mir-6951	ncRNA
common_peak2-23506-11-9-0.186765489364251-0.344532117358383	chr15	76368975	76369420	+	0	NA	promoter-TSS (NM_013909)	promoter-TSS (NM_013909)	-21	NM_013909	30840	Mm.275279	NM_013909	ENSMUSG00000022559	Fbxl6	AU021795|Fbl6	F-box and leucine-rich repeat protein 6	protein-coding
common_peak2-23252-17-8-1.04837133676273-1.30305656033811	chr15	12232056	12232574	+	0	NA	Intergenic	B4A|SINE|B4	-18936	NM_025673	66629	Mm.157655	NM_025673	ENSMUSG00000022200	Golph3	4733401N08Rik|5730410D03Rik|AW413496	golgi phosphoprotein 3	protein-coding
common_peak1-14987-24-35--0.376715098674596-0.470271536760928	chr3	107759642	107760422	+	0	NA	Intergenic	Intergenic	12060	NM_010359	14864	Mm.440885	NM_010359	ENSMUSG00000004038	Gstm3	Fsc2|mGSTM5	glutathione S-transferase, mu 3	protein-coding
common_peak2-29549-4-7--1.02346051385325-1.09384600808989	chr6	41200403	41200838	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-51651	NM_011646	22074	Mm.383263	NM_011646	ENSMUSG00000054106	Try4	0910001B19Rik|Td	trypsin 4	protein-coding
common_peak2-29016-42-45-0.218767371810171-0.478941451571433	chr5	112276661	112277684	+	0	NA	Intergenic	L1MA5A|LINE|L1	-86424	NR_045833	269683	Mm.136946	NM_207252	ENSMUSG00000085271	E130006D01Rik	Gm16018|Gm681|OTTMUSG00000029083	RIKEN cDNA E130006D01 gene	ncRNA
common_peak2-20677-21-14-0.662598669657717-0.879255460030357	chr10	86705864	86706543	+	0	NA	Intergenic	L1_Mus1|LINE|L1	185412	NM_029685	76640	Mm.78423	NM_029685	ENSMUSG00000047129	1700113H08Rik	-	RIKEN cDNA 1700113H08 gene	protein-coding
common_peak1-15801-35-30-0.477173948075629-0.806432121853427	chr5	110230856	110231740	+	0	NA	Intergenic	RLTR22_Mus|LTR|ERVK	31863	NR_027964	667213	Mm.454429	NR_027964		Gm10416	EG667213|ENSMUSG00000072761	zinc finger protein pseudogene	pseudo
common_peak2-21138-42-50-0.0699039858956887-0.334445504886124	chr11	54866279	54867183	+	0	NA	intron (NM_177471, intron 3 of 6)	MTE2b|LTR|MaLR	-19758	NM_013472	11749	Mm.265347	NM_013472	ENSMUSG00000018340	Anxa6	AW107198|Anx6|AnxVI|Cabm|Camb	annexin A6	protein-coding
common_peak2-26048-10-14--0.550475250599749-0.446472590016315	chr2	25460401	25461018	+	0	NA	intron (NM_001024616, intron 1 of 14)	intron (NM_001024616, intron 1 of 14)	3257	NM_001024616	227624	Mm.29600	NM_001024616	ENSMUSG00000015087	Rabl6	B230208H17Rik|Rbel1|Rbel1a|Rbel1b|parf	RAB, member RAS oncogene family-like 6	protein-coding
common_peak2-29600-111-163-0.0601417867920846-0.342643027274497	chr6	51468910	51471498	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	-3698	NM_001127349	71982	Mm.294166	NM_028035	ENSMUSG00000038301	Snx10	2410004M09Rik	sorting nexin 10	protein-coding
unique_peak1-1394-11-1-2.50869358425161-2.83420869758413	chr12	69531898	69532534	+	0	NA	Intergenic	Intergenic	727957	NM_009093	20090	Mm.379006	NM_009093	ENSMUSG00000034892	Rps29	-	ribosomal protein S29	protein-coding
common_peak2-31483-7-5-0.214128329577033-1.01466476204226	chr8	106576658	106576997	+	0	NA	Intergenic	Intergenic	-48698	NM_009868	12562	Mm.21767	NM_009868	ENSMUSG00000031871	Cdh5	7B4|AA408225|Cd144|VE-Cad|VECD|VEcad|Vec	cadherin 5	protein-coding
common_peak1-9997-10-14--0.550475250599749-0.446472590016315	chr13	98205682	98206199	+	0	NA	intron (NR_110432, intron 1 of 1)	intron (NR_110432, intron 1 of 1)	1015	NR_110432	100039691	Mm.219358	NR_110430		Lincenc1	ENSMUSG00000078952|Gm11019|Gm2373|linc-Enc1	long intergenic non-coding RNA, embryonic stem cells expressed 1	ncRNA
common_peak2-21614-51-110--0.719492040747533-2.59227823050903	chr11	100319932	100320889	+	0	NA	Intergenic	ID|SINE|ID	13686	NM_172565	217194	Mm.183320	NM_172565	ENSMUSG00000048732	Klhl11	BC011167	kelch-like 11	protein-coding
common_peak2-29566-68-113--0.262929234866445-0.639702037584613	chr6	47752801	47754411	+	0	NA	promoter-TSS (NR_030485)	promoter-TSS (NR_030485)	45	NR_030485	735289		NR_030485		Mir704	Mirn704|mmu-mir-704	microRNA 704	ncRNA
unique_peak1-6437-16-2-2.53330114154691-3.78760380288747	chr7	98378550	98379395	+	0	NA	intron (NM_011807, intron 1 of 22)	intron (NM_011807, intron 1 of 22)	139676	NM_011807	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
common_peak1-12852-9-5-0.604650905683064-1.21398586181642	chr18	75280072	75280600	+	0	NA	intron (NM_027727, intron 10 of 16)	intron (NM_027727, intron 10 of 16)	101910	NM_027727	69190	Mm.173826	NM_027727	ENSMUSG00000035765	Dym	1810041M12Rik|4933427L07Rik|C030019K18Rik	dymeclin	protein-coding
unique_peak1-6313-13-1-2.77847203063777-3.64038867156802	chr7	44603860	44604585	+	0	NA	Intergenic	Intergenic	1915682	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak1-4929-10-5-0.771452844287613-1.33892459842472	chr4	59329579	59330150	+	0	NA	intron (NM_001163288, intron 15 of 16)	intron (NM_001163288, intron 15 of 16)	56941	NR_105031	101055769	Mm.421401	NR_105031		LOC101055769	-	uncharacterized LOC101055769	ncRNA
unique_peak2-39896-1-7--2.62705701021674-1.80617997398389	chrX	86926021	86926415	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-71389	NM_001085511	245509	Mm.297700	NM_001085511	ENSMUSG00000079513	4932429P05Rik	-	RIKEN cDNA 4932429P05 gene	protein-coding
unique_peak2-33024-2-12--2.61789397440441-2.55640854263862	chr10	68248480	68249072	+	0	NA	Intergenic	Intergenic	62282	NM_177794	327766	Mm.2479	NM_177794	ENSMUSG00000060044	Tmem26	3230401A06|AI195372	transmembrane protein 26	protein-coding
common_peak2-29608-16-20--0.274053780510699-0.353907621462756	chr6	53573153	53574054	+	0	NA	intron (NM_172728, intron 3 of 6)	intron (NM_172728, intron 3 of 6)	50235	NM_172728	231991	Mm.321138	NM_172728	ENSMUSG00000053007	Creb5	Crebpa|D430026C09Rik	cAMP responsive element binding protein 5	protein-coding
common_peak2-27335-8-6-0.197867495889966-1.03789460276074	chr3	69200989	69201313	+	0	NA	intron (NM_178726, intron 1 of 3)	L1MD2|LINE|L1	80311	NM_178726	242083	Mm.40577	NM_178726		Ppm1l	3222401G13|5930404J21Rik|AI481720|AW045850|PP2C|PP2Cepsilon|Pp2ce|Ppp2ce|mKIAA4175	protein phosphatase 1 (formerly 2C)-like	protein-coding
unique_peak1-2265-8-2-1.42025991722641-1.65811743852845	chr15	78000035	78000541	+	0	NA	intron (NM_025931, intron 1 of 6)	intron (NM_025931, intron 1 of 6)	4250	NM_025931	67042	Mm.30191	NM_025931	ENSMUSG00000016637	Ift27	2600013G09Rik|Rabl4	intraflagellar transport 27	protein-coding
common_peak1-16148-38-54--0.20990705422613-0.377714458142987	chr5	74535220	74536331	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	46220	NR_031758	100313943	Mm.46547	NR_031758	ENSMUSG00000093355	Snora26	MBI-6	small nucleolar RNA, H/ACA box 26	snoRNA
common_peak2-31963-22-32--0.397110014271049-0.488172498216822	chr9	66350472	66351269	+	0	NA	intron (NM_145617, intron 76 of 77)	GA-rich|Low_complexity|Low_complexity	11530	NM_175206	74165	Mm.297998	NM_175206	ENSMUSG00000050503	Fbxl22	1110004B15Rik	F-box and leucine-rich repeat protein 22	protein-coding
unique_peak2-36919-4-8--1.19338551529556-1.21878474469819	chr3	100692386	100692791	+	0	NA	intron (NM_178594, intron 4 of 5)	URR1A|DNA|MER1_type	-33828	NM_001165952	229644	Mm.189351	NM_194343	ENSMUSG00000033233	Trim45	4921530N01Rik	tripartite motif-containing 45	protein-coding
unique_peak2-35070-5-21--2.16381195464315-2.59995804677862	chr16	14705756	14706410	+	0	NA	exon (NM_011415, exon 1 of 3)	exon (NM_011415, exon 1 of 3)	131	NM_011415	20583	Mm.4272	NM_011415	ENSMUSG00000022676	Snai2	Slug|Slugh|Snail2	snail family zinc finger 2	protein-coding
common_peak2-31823-17-16-0.130833496954699-0.356936432242225	chr9	44112976	44113572	+	0	NA	intron (NM_172162, intron 1 of 9)	intron (NM_172162, intron 1 of 9)	480	NM_172162	102423	Mm.24570	NM_172162	ENSMUSG00000032119	Hinfp	AA589481|HiNF-P|Mizf	histone H4 transcription factor	protein-coding
unique_peak1-5821-12-7-0.648775985087639-0.697979855752659	chr6	72101816	72102397	+	0	NA	intron (NM_001035228, intron 6 of 6)	intron (NM_001035228, intron 6 of 6)	-28915	NR_045165	71265	Mm.442035	NR_045163		4933431G14Rik	4930565C19Rik	RIKEN cDNA 4933431G14 gene	ncRNA
unique_peak1-5352-15-5-1.4272022498345-1.61682445937017	chr5	92221696	92222504	+	0	NA	Intergenic	Intergenic	-25774	NR_045383	73452	Mm.396233	NR_045383		1700063O14Rik	-	RIKEN cDNA 1700063O14 gene	ncRNA
common_peak2-25075-17-35--0.951628663237274-1.34608670144205	chr18	35498224	35499175	+	0	NA	intron (NM_030749, intron 5 of 9)	intron (NM_030749, intron 5 of 9)	-124021	NM_178005	107065	Mm.39900	NM_178005	ENSMUSG00000071862	Lrrtm2	AI851755|BB129880|C630011A14Rik|mKIAA0416	leucine rich repeat transmembrane neuronal 2	protein-coding
common_peak1-15757-9-5-0.604650905683064-1.21398586181642	chr4	150706968	150707455	+	0	NA	intron (NM_001081557, intron 5 of 23)	MTEb|LTR|MaLR	-275149	NM_009498	22319	Mm.273930	NM_009498	ENSMUSG00000028955	Vamp3	D130027G05Rik|VAMP-3|ceb	vesicle-associated membrane protein 3	protein-coding
unique_peak2-38386-4-11--1.6084230145744-1.68134727924692	chr7	17540074	17540535	+	0	NA	Intergenic	B1_Mur3|SINE|Alu	-4840	NM_001007569	71691	Mm.275673	NM_001007569	ENSMUSG00000041141	Pnmal1	0710005I19Rik	PNMA-like 1	protein-coding
unique_peak1-5225-9-2-1.60465090568306-1.87199725847353	chr5	38544008	38544577	+	0	NA	intron (NM_010942, intron 3 of 4)	intron (NM_010942, intron 3 of 4)	6414	NM_010942	18196	Mm.7414	NM_010942	ENSMUSG00000029126	Nsg1	Neep21|m234|p21	neuron specific gene family member 1	protein-coding
common_peak2-31331-10-11--0.228547155712387-0.31137425193576	chr8	83594734	83595169	+	0	NA	Intergenic	Intergenic	-56146	NM_027554	74841	Mm.246018	NM_027554	ENSMUSG00000038250	Usp38	4631402N15Rik|4833420O05Rik|AA536967|AU044701|AW544820|mKIAA1891	ubiquitin specific peptidase 38	protein-coding
unique_peak1-4338-10-4-1.03448725012141-1.5150158574804	chr2	153177525	153178042	+	0	NA	intron (NM_001039939, intron 1 of 11)	B2_Mm2|SINE|B2	5908	NM_001039939	228790	Mm.330677	NM_001039939	ENSMUSG00000042548	Asxl1	mKIAA0978	additional sex combs like 1	protein-coding
common_peak2-29782-12-11-0.0638134843664826-0.337263207250336	chr6	88963554	88964261	+	0	NA	Intergenic	Intergenic	-82202	NM_175017	232217	Mm.281744	NM_175017	ENSMUSG00000055403	4933427D06Rik	-	RIKEN cDNA 4933427D06 gene	protein-coding
unique_peak2-39683-7-7--0.200909169701811-0.97990265578305	chr9	108797099	108797512	+	0	NA	intron (NM_134420, intron 18 of 19)	intron (NM_134420, intron 18 of 19)	-19645	NM_027066	69384	Mm.158271	NM_027066	ENSMUSG00000025652	Tmem89	1700024B07Rik	transmembrane protein 89	protein-coding
unique_peak2-35446-3-7--1.41398308995928-1.23214870625617	chr17	35600727	35601204	+	0	NA	Intergenic	RMER19A|LTR|ERVK	-6069	NM_010391	15007	Mm.88795	NM_010391	ENSMUSG00000067235	H2-Q10	H-2Q10|Q10|Qa10	histocompatibility 2, Q region locus 10	protein-coding
common_peak2-22855-18-19--0.00900894365901106-0.306598483909153	chr14	25735004	25735945	+	0	NA	Intergenic	Intergenic	227253	NR_045718	75862	Mm.109191	NR_045718		4930572O13Rik	-	RIKEN cDNA 4930572O13 gene	ncRNA
unique_peak1-5720-11-2-1.92373108353046-2.32232533660526	chr6	42241524	42242228	+	0	NA	intron (NM_013491, intron 5 of 22)	intron (NM_013491, intron 5 of 22)	5192	NM_013491	12723	Mm.386757	NM_013491	ENSMUSG00000029862	Clcn1	Clc-1|Clc1|SMCC1|adr|mto|myotonia|nmf355	chloride channel 1	protein-coding
common_peak1-15715-19-7-1.40268732666169-1.89173646618542	chr4	141282018	141282848	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-3099	NM_001017966	68817	Mm.393721	NM_001017966		Ddi2	1110056G13Rik|1700027M01Rik|9130022E05Rik|AI604911|AU040698	DNA-damage inducible protein 2	protein-coding
common_peak2-20907-13-15--0.221527969362231-0.308519316180257	chr11	4703622	4704407	+	0	NA	intron (NM_001252250, intron 6 of 16)	intron (NM_001252250, intron 6 of 16)	29124	NM_001252253	18016	Mm.297109	NM_010898	ENSMUSG00000009073	Nf2	merlin	neurofibromatosis 2	protein-coding
common_peak2-20382-17-27--0.589058583852566-0.604689589251113	chr10	18844974	18845600	+	0	NA	Intergenic	MIR|SINE|MIR	-16268	NR_038021	100504265	Mm.383417	NR_038021		Gm20139	-	predicted gene, 20139	ncRNA
common_peak2-27462-20-14-0.581184188982674-0.690311289528838	chr3	90583921	90584594	+	0	NA	Intergenic	L1Md_F3|LINE|L1	53429	NM_207263	384997	Mm.316644	NM_207263	ENSMUSG00000042250	Pglyrp4	Gm1478|Gm413	peptidoglycan recognition protein 4	protein-coding
common_peak1-13568-49-82--0.368755608321741-0.78414664851096	chr2	6871571	6873266	+	0	NA	intron (NM_001110231, intron 4 of 15)	intron (NM_001110231, intron 4 of 15)	-22650	NR_027890	68144	Mm.483289	NM_026575		5031426D15Rik	-	RIKEN cDNA 5031426D15 gene	ncRNA
common_peak2-31447-63-121--0.492424746492297-1.51330020762793	chr8	104442228	104443162	+	0	NA	Intergenic	Intergenic	866316	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
unique_peak2-35191-7-6--0.00826409175941478-0.97990265578305	chr16	57528515	57528941	+	0	NA	intron (NM_001040397, intron 4 of 4)	intron (NM_001040397, intron 4 of 4)	-20627	NM_001177871	78749	Mm.328360	NM_001040397	ENSMUSG00000043336	Filip1l	4631422O05Rik|Doc1	filamin A interacting protein 1-like	protein-coding
unique_peak2-38701-7-9--0.522837264589173-1.05908390183068	chr7	105633061	105633512	+	0	NA	Intergenic	B4A|SINE|B4	-9446	NM_001113379	434215	Mm.323057	NM_001113379	ENSMUSG00000090958	Lrrc32	AI426318|D11S833Eh|D7H11S833E|EG434215|Garp	leucine rich repeat containing 32	protein-coding
common_peak2-20232-11-10-0.0492619656143161-0.31137425193576	chr1	181246814	181247348	+	0	NA	intron (NM_027188, intron 5 of 11)	intron (NM_027188, intron 5 of 11)	201053	NM_027188	69726	Mm.222338	NM_027188		Smyd3	2410008A19Rik|Zmynd1	SET and MYND domain containing 3	protein-coding
common_peak1-17271-14-5-1.31425365963649-1.4372489031793	chr6	135026578	135027168	+	0	NA	intron (NM_181444, intron 1 of 3)	RMER13B|LTR|ERVK	11193	NM_181444	232431	Mm.23575	NM_181444	ENSMUSG00000046733	Gprc5a	Rai3|Raig1	G protein-coupled receptor, family C, group 5, member A	protein-coding
unique_peak1-5137-16-0-4.11826364226806-5.41853992195166	chr5	10559328	10559566	+	0	NA	Intergenic	Intergenic	-305582	NR_003596	623849	Mm.335888	NR_003596	ENSMUSG00000091422	Gm6455	EG623849	predicted gene 6455	pseudo
common_peak2-27790-8-6-0.197867495889966-1.03789460276074	chr3	138060305	138060670	+	0	NA	Intergenic	Lx|LINE|L1	-17974	NM_011996	26876	Mm.158750	NM_011996	ENSMUSG00000037797	Adh4	Adh2	alcohol dehydrogenase 4 (class II), pi polypeptide	protein-coding
unique_peak1-5668-29-12-1.41185036247402-2.85339697372352	chr6	31078293	31079599	+	0	NA	intron (NR_110471, intron 3 of 3)	intron (NR_110471, intron 3 of 3)	-65853	NR_029532	387223		NR_029532	miRBase:MI0000143	Mir29b-1	Mirn29b|Mirn29b-1	microRNA 29b-1	ncRNA
unique_peak1-137-8-0-3.00522241794757-2.70926996097583	chr1	68481392	68481873	+	0	NA	intron (NM_010154, intron 3 of 26)	Lx2|LINE|L1	673001	NM_010154	13869	Mm.442420	NM_010154	ENSMUSG00000062209	Erbb4	Her4|c-erbB-4	v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian)	protein-coding
common_peak1-18620-19-19-0.0807592317743238-0.322753776620787	chr8	108896614	108897261	+	0	NA	Intergenic	Intergenic	-35049	NM_021491	58994	Mm.23298	NM_021491	ENSMUSG00000031906	Smpd3	4631433G07Rik|AI427456|AW537966|fro|nSMase2	sphingomyelin phosphodiesterase 3, neutral	protein-coding
unique_peak1-5398-9-1-2.18961340640422-2.31132995230379	chr5	104381660	104382125	+	0	NA	Intergenic	Intergenic	24515	NM_198030	243168	Mm.284944	NM_198030	ENSMUSG00000034528	Hsd17b13	AI047820|PAN1B-like|Pan1b	hydroxysteroid (17-beta) dehydrogenase 13	protein-coding
common_peak1-18812-32-56--0.553797994945081-0.965186267682351	chr9	89210772	89211762	+	0	NA	Intergenic	L1ME1|LINE|L1	105239	NM_026829	107885	Mm.486274	NM_026829	ENSMUSG00000066442	Mthfs	1110034I12Rik|2310020H23Rik|AI119695	5, 10-methenyltetrahydrofolate synthetase	protein-coding
common_peak1-14370-43-73--0.426890180105247-0.852510036703126	chr2	167688415	167689885	+	0	NA	Intergenic	Intergenic	-68677	NM_011201	19246	Mm.277916	NM_011201	ENSMUSG00000027540	Ptpn1	PTP-1B|PTP-HA2|PTP1B	protein tyrosine phosphatase, non-receptor type 1	protein-coding
common_peak1-8477-11-17--0.661231417190699-0.58239619684445	chr10	80398929	80399507	+	0	NA	Intergenic	Intergenic	6382	NM_008655	17873	Mm.1360	NM_008655	ENSMUSG00000015312	Gadd45b	AI323528|Myd118	growth arrest and DNA-damage-inducible 45 beta	protein-coding
common_peak1-14341-41-63--0.29885129515134-0.529856340941694	chr2	164562109	164563959	+	0	NA	intron (NM_027961, intron 1 of 3)	intron (NM_027961, intron 1 of 3)	5733	NM_027961	71856	Mm.330770	NM_027961	ENSMUSG00000076434	Wfdc3	1700015L13Rik|1700127F16Rik	WAP four-disulfide core domain 3	protein-coding
common_peak2-21281-27-20-0.599228528116475-0.90781512069806	chr11	70239634	70240423	+	0	NA	Intergenic	Intergenic	-6054	NM_001271360	216869	Mm.203747	NM_145429	ENSMUSG00000060216	Arrb2	AI326910|AW122872	arrestin, beta 2	protein-coding
unique_peak1-1840-23-4-2.39983940962172-4.21583923654667	chr14	43527919	43529073	+	0	NA	Intergenic	Intergenic	-151754	NM_001244671	100042055	Mm.429109	NM_001244671	ENSMUSG00000095226	Gm10377	ENSMUSG00000072606	predicted gene 10377	protein-coding
common_peak2-27806-50-115--0.81704067864862-3.21778854595079	chr3	144204052	144206069	+	0	NA	intron (NM_011828, intron 1 of 6)	intron (NM_011828, intron 1 of 6)	28120	NM_011828	23908	Mm.12863	NM_011828	ENSMUSG00000040151	Hs2st1	AW214369|Hs2st|mKIAA0448	heparan sulfate 2-O-sulfotransferase 1	protein-coding
common_peak2-23058-18-23--0.272043349492805-0.34651636097721	chr14	70519769	70520805	+	0	NA	intron (NM_021328, intron 2 of 8)	MIR|SINE|MIR	20335	NM_021328	57784	Mm.24186	NM_021328	ENSMUSG00000022089	Bin3	1700015F07Rik	bridging integrator 3	protein-coding
common_peak2-25615-50-43-0.581508697841655-1.3628545831955	chr19	8982908	8984367	+	0	NA	exon (NM_001293621, exon 8 of 24)	exon (NM_001293621, exon 8 of 24)	11090	NM_008060	14376	Mm.3196	NM_008060	ENSMUSG00000071650	Ganab	AU042638|G2an|GluII|mKIAA0088	alpha glucosidase 2 alpha neutral subunit	protein-coding
common_peak2-24096-15-10-0.552733131918359-0.604422558181019	chr16	32099112	32099724	+	0	NA	promoter-TSS (NM_025892)	promoter-TSS (NM_025892)	395	NM_001111025	72084	Mm.37613	NM_024464	ENSMUSG00000023791	Pigx	2010319C14Rik|PIG-X	phosphatidylinositol glycan anchor biosynthesis, class X	protein-coding
common_peak1-16688-49-50-0.333858481053689-0.675315000769687	chr6	13676938	13678294	+	0	NA	Intergenic	RLTR17|LTR|ERVK	-49650	NM_175312	101148	Mm.354863	NM_175312	ENSMUSG00000042742	B630005N14Rik	AI666701	RIKEN cDNA B630005N14 gene	protein-coding
unique_peak2-40008-0-6--3.64748585253182-1.56314192529759	chrY	37766491	37766905	+	0	NA	Intergenic	Intergenic	35379440	NM_001270512	100041505	Mm.491824	NM_001270512		Gm3376	Rbmy1b	predicted gene 3376	protein-coding
unique_peak1-3461-13-3-1.77847203063777-2.58603100924543	chr19	9886545	9887091	+	0	NA	Intergenic	Lx|LINE|L1	87205	NM_016692	16319	Mm.29755	NM_016692	ENSMUSG00000024660	Incenp	2700067E22Rik|AU019509|C130081E20|C77457	inner centromere protein	protein-coding
common_peak2-29579-20-7-1.48807478459119-2.07034318903805	chr6	48395631	48396036	+	0	NA	promoter-TSS (NM_001085417)	promoter-TSS (NM_001085417)	-9	NM_001085417	68910	Mm.2464	NM_020589	ENSMUSG00000068551	Zfp467	1190001I08Rik|AB041616|AI426952|AV017623|EZI|Znf467	zinc finger protein 467	protein-coding
unique_peak1-2044-26-5-2.34293659143731-4.60318595491365	chr15	27417650	27418689	+	0	NA	intron (NM_020332, intron 1 of 11)	intron (NM_020332, intron 1 of 11)	21737	NM_020332	11732	Mm.265264	NM_020332	ENSMUSG00000022265	Ank	Ankh|D15Ertd221e|ank|mKIAA1581	progressive ankylosis	protein-coding
common_peak1-8927-23-18-0.473839991065495-0.618644178587689	chr11	52094522	52095546	+	0	NA	intron (NM_009331, intron 1 of 8)	intron (NM_009331, intron 1 of 8)	718	NM_009331	21414	Mm.31630	NM_009331	ENSMUSG00000000782	Tcf7	AI465550|TCF-1|Tcf1	transcription factor 7, T cell specific	protein-coding
common_peak1-18470-42-41-0.350011905088423-0.688538237251116	chr8	84664252	84665735	+	0	NA	Intergenic	(CAAA)n|Simple_repeat|Simple_repeat	261492	NM_001254747	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak2-22366-98-131-0.157374574072097-0.501103463912485	chr13	28950764	28953449	+	0	NA	intron (NR_045053, intron 2 of 8)	intron (NR_045053, intron 2 of 8)	25185	NR_045054	72518	Mm.37454	NR_045053		2610307P16Rik	AI666457	RIKEN cDNA 2610307P16 gene	ncRNA
common_peak1-16157-16-21--0.341167976369236-0.392630012299441	chr5	76974566	76975280	+	0	NA	intron (NM_027270, intron 9 of 19)	intron (NM_027270, intron 9 of 19)	16587	NM_001289770	69940	Mm.403233	NM_027270	ENSMUSG00000036435	Exoc1	2810407P21Rik|A730011E05Rik|SEC3|Sec3l1|Sec3p	exocyst complex component 1	protein-coding
unique_peak1-6065-9-1-2.18961340640422-2.31132995230379	chr6	116647127	116647667	+	0	NA	intron (NM_178768, intron 3 of 4)	intron (NM_178768, intron 3 of 4)	19379	NM_178768	319776	Mm.133120	NM_178768	ENSMUSG00000048108	Tmem72	C230095G01Rik	transmembrane protein 72	protein-coding
common_peak1-12735-9-17--0.980311595038092-0.844317084070804	chr18	54986399	54986891	+	0	NA	Intergenic	Intergenic	163189	NM_175751	269023	Mm.192984	NM_175751	ENSMUSG00000052713	Zfp608	4932417D18Rik|D430007A19Rik|Znf608	zinc finger protein 608	protein-coding
unique_peak2-38551-2-4--1.23938235115068-0.931118710592187	chr7	58843910	58844267	+	0	NA	intron (NR_073508, intron 20 of 20)	(TAGA)n|Simple_repeat|Simple_repeat	-33112	NM_080853	140919	Mm.256618	NM_080853	ENSMUSG00000030500	Slc17a6	2900073D12Rik|DNPI|VGLUT2	solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6	protein-coding
common_peak2-24763-4-48--3.63817035796846-9.83023526052148	chr17	56199907	56200170	+	0	NA	intron (NM_013733, intron 7 of 13)	B3A|SINE|B2	14374	NM_024432	66530	Mm.28000	NM_024432		Ubxn6	1200008L11Rik|2210415J11Rik|AU040909|Ubxd1|Ubxdc2	UBX domain protein 6	protein-coding
unique_peak1-4225-12-6-0.841421063030034-1.58711810488664	chr2	122704754	122705574	+	0	NA	Intergenic	L1_Mm|LINE|L1	97429	NM_021507	59010	Mm.28986	NM_021507	ENSMUSG00000005803	Sqrdl	0610039J17Rik|4930557M22Rik	sulfide quinone reductase-like (yeast)	protein-coding
unique_peak2-34719-8-14--0.901668177660948-0.660903317613906	chr15	36496209	36496916	+	0	NA	Intergenic	Intergenic	-11235	NM_025712	66696	Mm.253627	NM_025712	ENSMUSG00000013611	Snx31	4631426E05Rik	sorting nexin 31	protein-coding
common_peak1-13920-9-9--0.132314688483142-1.03275496310833	chr2	84633518	84634034	+	0	NA	Intergenic	Intergenic	-5209	NM_019949	56791	Mm.38261	NM_019949	ENSMUSG00000027078	Ube2l6	2810489I21Rik|RIG-B|UBCH8|Ubce8|Ubcm8	ubiquitin-conjugating enzyme E2L 6	protein-coding
common_peak1-13620-15-22--0.511397205501357-0.50761186003982	chr2	24934652	24935301	+	0	NA	promoter-TSS (NM_028093)	promoter-TSS (NM_028093)	-867	NM_028093	72090	Mm.33403	NM_028093	ENSMUSG00000036813	Entpd8	-	ectonucleoside triphosphate diphosphohydrolase 8	protein-coding
unique_peak2-33081-9-25--1.51082631173687-2.00244947055753	chr10	80074631	80075602	+	0	NA	exon (NM_019575, exon 6 of 7)	exon (NM_019575, exon 6 of 7)	3111	NR_105877	102465550		NR_105877		Mir6912	mmu-mir-6912	microRNA mir-6912	ncRNA
common_peak2-28447-18-4-1.99099105634099-2.82951996911245	chr4	150544464	150544819	+	0	NA	intron (NM_001081557, intron 6 of 23)	intron (NM_001081557, intron 6 of 23)	-112579	NM_009498	22319	Mm.273930	NM_009498	ENSMUSG00000028955	Vamp3	D130027G05Rik|VAMP-3|ceb	vesicle-associated membrane protein 3	protein-coding
unique_peak1-2638-10-3-1.35641534500877-1.75805390616669	chr16	44015886	44016559	+	0	NA	5' UTR (NM_153528, exon 1 of 13)	5' UTR (NM_153528, exon 1 of 13)	327	NM_153528	207798	Mm.19316	NM_153528	ENSMUSG00000036292	Gramd1c	4921521N14Rik	GRAM domain containing 1C	protein-coding
unique_peak2-36348-2-7--1.91745425626332-1.45399745587252	chr2	92609598	92610020	+	0	NA	Intergenic	Intergenic	-145449	NM_030725	80976	Mm.33490	NM_030725	ENSMUSG00000027220	Syt13	5730409J20Rik|AI549909|mKIAA1427	synaptotagmin XIII	protein-coding
unique_peak2-39743-6-9--0.75652998450706-1.11707584880836	chr9	123717074	123717506	+	0	NA	intron (NM_030712, intron 1 of 1)	intron (NM_030712, intron 1 of 1)	1695	NM_030712	80901	Mm.124289	NM_030712	ENSMUSG00000048521	Cxcr6	BB217514|BONZO|STRL33	chemokine (C-X-C motif) receptor 6	protein-coding
common_peak2-30248-8-16--1.08224042330277-0.891319708951328	chr7	6383392	6383896	+	0	NA	3' UTR (NM_001134752, exon 4 of 4)	3' UTR (NM_001134752, exon 4 of 4)	-8969	NM_177061	257882	Mm.479489	NM_177061	ENSMUSG00000090824	Olfr1344	4930415J05Rik|MOR124-1	olfactory receptor 1344	protein-coding
common_peak2-30773-11-17--0.661231417190699-0.58239619684445	chr7	125552213	125552923	+	0	NA	intron (NM_138649, intron 6 of 7)	MIR|SINE|MIR	34498	NM_138649	110058	Mm.156558	NM_138649	ENSMUSG00000058420	Syt17	Bk	synaptotagmin XVII	protein-coding
common_peak2-19773-10-8-0.186490343566457-1.078512453669	chr1	82785812	82786325	+	0	NA	Intergenic	MTD|LTR|MaLR	-21037	NM_025453	66261	Mm.46325	NM_025453	ENSMUSG00000026149	Tm4sf20	1810018L02Rik	transmembrane 4 L six family member 20	protein-coding
common_peak1-16782-78-149--0.421997596335346-1.44385898116082	chr6	38874785	38877192	+	0	NA	intron (NM_011539, intron 1 of 12)	B3|SINE|B2	7003	NM_011539	21391	Mm.4054	NM_011539	ENSMUSG00000029925	Tbxas1	CYP5|CYP5A1|THAS|TS|TXAS|TXS	thromboxane A synthase 1, platelet	protein-coding
unique_peak1-4682-12-0-3.64877598508764-4.21441993929574	chr3	95612599	95613089	+	0	NA	intron (NM_001081293, intron 1 of 10)	intron (NM_001081293, intron 1 of 10)	10032	NM_001081293	75137	Mm.196275	NM_028328	ENSMUSG00000028106	Rprd2	2810036A19Rik|4930535B03Rik|6720469I21Rik|AL022841|AL022940|AU021304|BB077382|mKIAA0460	regulation of nuclear pre-mRNA domain containing 2	protein-coding
common_peak1-15274-38-62--0.405827264201386-0.688998294217078	chr4	34550521	34551767	+	0	NA	intron (NM_001159563, intron 4 of 19)	Lx7|LINE|L1	11047	NM_001159563	50793	Mm.399624	NM_015824		Orc3	Orc3l	origin recognition complex, subunit 3	protein-coding
common_peak1-7448-29-28-0.254309085487539-0.470271536760928	chr1	72236520	72237373	+	0	NA	intron (NM_001005423, intron 2 of 4)	URR1B|DNA|MER1_type	21935	NM_001005423	381269	Mm.422636	NM_001005423	ENSMUSG00000039395	Mreg	Gm974|Wdt2|dsu	melanoregulin	protein-coding
common_peak1-11843-50-63-0.0409403164789524-0.316181169053401	chr16	87698778	87700000	+	0	NA	intron (NM_007520, intron 1 of 4)	CpG	190	NM_007520	12013	Mm.26147	NM_007520	ENSMUSG00000025612	Bach1	6230421P05Rik|AI323795	BTB and CNC homology 1	protein-coding
common_peak1-14627-19-35--0.767237674780626-1.06916698217164	chr3	54734548	54735350	+	0	NA	Intergenic	Charlie1a|DNA|MER1_type	-15140	NM_177854	329641	Mm.51187	NM_177854	ENSMUSG00000056306	Sertm1	6030405A18Rik	serine rich and transmembrane domain containing 1	protein-coding
unique_peak2-34091-8-8--0.164702583494742-1.00793137938329	chr13	12637527	12638077	+	0	NA	Intergenic	Intergenic	-20348	NM_026184	67475	Mm.358706	NM_026184	ENSMUSG00000057069	Ero1lb	1300013B24Rik|1700065B09Rik|AI447560|ero1-beta	ERO1-like beta (S. cerevisiae)	protein-coding
unique_peak2-33905-7-7--0.200909169701811-0.97990265578305	chr12	55206894	55207349	+	0	NA	Intergenic	Intergenic	97740	NM_028133	112407	Mm.133037	NM_028133	ENSMUSG00000035105	Egln3	2610021G09Rik|AI505553|AI648162|Hif-p4h-3|Phd3|SM-20	egl-9 family hypoxia-inducible factor 3	protein-coding
common_peak1-10226-9-8-0.0196884049619079-1.03275496310833	chr13	51853710	51854174	+	0	NA	intron (NM_001281880, intron 2 of 16)	intron (NM_001281880, intron 2 of 16)	35174	NM_001281880	20354	Mm.33903	NM_013660	ENSMUSG00000021451	Sema4d	CD100|Semacl2|Semaj|Semcl2|coll-4	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D	protein-coding
unique_peak2-37705-3-8--1.58390809140159-1.39487600375387	chr5	103692454	103692930	+	0	NA	intron (NR_040699, intron 4 of 6)	intron (NR_040699, intron 4 of 6)	35356	NR_040699	74624	Mm.389662	NR_040699		4930429D17Rik	-	RIKEN cDNA 4930429D17 gene	ncRNA
common_peak2-20908-20-41--0.904242638187568-1.56490221051684	chr11	4848648	4849631	+	0	NA	intron (NM_001243043, intron 1 of 22)	intron (NM_001243043, intron 1 of 22)	-1072	NM_010904	380684	Mm.298283	NM_010904	ENSMUSG00000020396	Nefh	NF-H|NF200|Nfh|mKIAA0845	neurofilament, heavy polypeptide	protein-coding
common_peak2-24083-35-29-0.524479662853985-0.895935469411238	chr16	31592444	31593707	+	0	NA	Intergenic	Intergenic	-70454	NM_001252435	13383	Mm.382	NM_007862	ENSMUSG00000022770	Dlg1	B130052P05Rik|Dlgh1|E-dlg/SAP97|SAP-97|SAP97|mKIAA4187	discs, large homolog 1 (Drosophila)	protein-coding
unique_peak1-4353-6-1-1.5653981103803-1.56314192529759	chr2	155590897	155591355	+	0	NA	Intergenic	Intergenic	-9954	NM_010808	17391	Mm.330707	NM_010808	ENSMUSG00000027612	Mmp24	AU040325|MT5-MMP|MT5MMP|MTMMP5	matrix metallopeptidase 24	protein-coding
common_peak1-19134-14-13-0.0918612383000403-0.332077462497413	chr9	79792661	79793386	+	0	NA	intron (NM_001081243, intron 1 of 5)	intron (NM_001081243, intron 1 of 5)	32666	NM_001081243	70598	Mm.23049	NM_001081243	ENSMUSG00000034898	Filip1	5730485H21Rik|AI843021	filamin A interacting protein 1	protein-coding
common_peak1-11198-15-11-0.4272022498345-0.503257505534083	chr15	77876716	77877377	+	0	NA	intron (NM_007583, intron 1 of 3)	intron (NM_007583, intron 1 of 3)	72664	NM_007583	12300	Mm.277338	NM_007583		Cacng2	AW060990|B230105C07Rik|B930041E13Rik|stargazer|stargazin|stg|wag|waggler	calcium channel, voltage-dependent, gamma subunit 2	protein-coding
unique_peak2-32696-10-42--2.06984940969333-4.89888609789327	chr1	150164766	150165832	+	0	NA	Intergenic	Intergenic	1643115	NM_008869	18783	Mm.4186	NM_008869	ENSMUSG00000056220	Pla2g4a	Pla2g4|cPLA2|cPLA2alpha	phospholipase A2, group IVA (cytosolic, calcium-dependent)	protein-coding
common_peak2-28682-52-60-0.177522652702812-0.437489091603679	chr5	32610424	32611918	+	0	NA	intron (NM_030072, intron 21 of 38)	intron (NM_030072, intron 21 of 38)	-44782	NM_172147	665270	Mm.160067	NM_030072	ENSMUSG00000029134	Plb1	4632413E21Rik|4930433E17Rik|4930539A06Rik|BC033606	phospholipase B1	protein-coding
common_peak2-21391-24-21-0.333778284130419-0.518921928796332	chr11	80141629	80142368	+	0	NA	intron (NM_139228, intron 4 of 8)	L1MB3|LINE|L1	27584	NM_139228	246104	Mm.194148	NM_139228	ENSMUSG00000017692	Rhbdl3	AI847581|Rhbdl4|Rhomr1|Vrho	rhomboid, veinlet-like 3 (Drosophila)	protein-coding
common_peak1-9927-65-28-1.63418494434956-7.7427433490123	chr12	102261084	102263370	+	0	NA	intron (NM_026681, intron 2 of 29)	intron (NM_026681, intron 2 of 29)	-2249	NR_035421	100316805		NR_035421		Mir1190	Mirn1190|mmu-mir-1190	microRNA 1190	ncRNA
common_peak2-29918-20-24--0.155781405183531-0.319918318021793	chr6	115492387	115493365	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-1846	NM_199033	381802	Mm.291208	NM_199033	ENSMUSG00000042389	Tsen2	AU067695	tRNA splicing endonuclease 2 homolog (S. cerevisiae)	protein-coding
common_peak2-22287-12-22--0.874785970969374-0.809260849721102	chr13	13393040	13393623	+	0	NA	Intergenic	RLTR13D5|LTR|ERVK	92560	NM_031999	83924	Mm.379269	NM_031999	ENSMUSG00000021306	Gpr137b	AI788917|AU016435|AW546472|C730041E01|C80550|C80741|D13Abb1e|Tm7sf1	G protein-coupled receptor 137B	protein-coding
unique_peak1-754-17-1-3.21829633820504-4.59734841376773	chr10	116220211	116221266	+	0	NA	intron (NM_001033333, intron 19 of 24)	MLT1B|LTR|MaLR	-54505	NR_045345	72286	Mm.396207	NR_045345		1700030O20Rik	-	RIKEN cDNA 1700030O20 gene	ncRNA
common_peak1-10735-12-14--0.25811461052088-0.309074325783021	chr14	65374019	65374575	+	0	NA	intron (NM_001081177, intron 21 of 39)	intron (NM_001081177, intron 21 of 39)	102929	NM_001081177	16554	Mm.23611	NM_001081177	ENSMUSG00000060012	Kif13b	5330429L19Rik|6030414C01|AI429803|C130021D12Rik|GAKIN	kinesin family member 13B	protein-coding
common_peak2-32260-10-8-0.186490343566457-1.078512453669	chrX	8192590	8193032	+	0	NA	Intergenic	Intergenic	-26439	NM_198898	278174	Mm.379565	NM_198898	ENSMUSG00000079701	Ssxb3	-	synovial sarcoma, X member B, breakpoint 3	protein-coding
common_peak2-30981-18-15-0.312919151228352-0.456667090758524	chr8	3425477	3425984	+	0	NA	intron (NM_133962, intron 1 of 19)	ID_B1|SINE|B4	32722	NM_133962	102098	Mm.170461	NM_133962	ENSMUSG00000004568	Arhgef18	AI467246|D030053O22Rik	rho/rac guanine nucleotide exchange factor (GEF) 18	protein-coding
common_peak2-27091-40-106--1.08249130365005-4.57499458571973	chr3	104218497	104220468	+	0	NA	Intergenic	MTEa-int|LTR|MaLR	96297	NM_001025067	269473	Mm.34855	NM_001025067	ENSMUSG00000032913	Lrig2	4632419I10Rik|BB096938	leucine-rich repeats and immunoglobulin-like domains 2	protein-coding
common_peak2-23804-154-204-0.306865726607391-1.48869726034277	chr15	100226810	100228779	+	0	NA	intron (NM_001146161, intron 15 of 15)	ORR1A2|LTR|MaLR	25692	NM_001146161	18174	Mm.234608	NM_008732	ENSMUSG00000023030	Slc11a2	DCT1|DMT1|Nramp2|mk|van	solute carrier family 11 (proton-coupled divalent metal ion transporters), member 2	protein-coding
unique_peak2-37460-6-8--0.60452689106201-1.03789460276074	chr5	91242074	91242544	+	0	NA	Intergenic	L1Md_T|LINE|L1	18749	NM_011339	20309	Mm.64326	NM_011339	ENSMUSG00000029375	Cxcl15	Il8|Scyb15|lungkine|weche	chemokine (C-X-C motif) ligand 15	protein-coding
common_peak1-15795-9-13--0.617741515653384-0.459837087125828	chr4	155847357	155847832	+	0	NA	Intergenic	Intergenic	-238628	NM_198305	231003	Mm.423038	NM_198305	ENSMUSG00000078484	Klhl17	AL022703|BC058738	kelch-like 17	protein-coding
unique_peak2-35461-2-7--1.91745425626332-1.45399745587252	chr17	40873284	40873677	+	0	NA	Intergenic	Lx4A|LINE|L1	9411	NM_001038500	619517	Mm.391018	NM_001038500	ENSMUSG00000073396	Esp1	EG619517|Gm6084	exocrine gland secreted peptide 1	protein-coding
unique_peak2-33301-5-9--1.02630843089322-1.21398586181642	chr11	3912550	3913010	+	0	NA	Intergenic	ORR1D1-int|LTR|MaLR	-19005	NM_146013	103655	Mm.337476	NM_146013	ENSMUSG00000019368	Sec14l4	AI256582|AW536553|SPF|TAP	SEC14-like 4 (S. cerevisiae)	protein-coding
unique_peak2-37462-16-26--0.636623859895407-0.713114929964887	chr5	104020943	104022086	+	0	NA	intron (NM_011204, intron 45 of 47)	B4A|SINE|B4	36908	NM_029415	75750	Mm.7446	NM_029415	ENSMUSG00000029321	Slc10a6	8430417G17Rik|C78479|Soat	solute carrier family 10 (sodium/bile acid cotransporter family), member 6	protein-coding
common_peak1-19140-12-25--1.05166373305345-1.1381569562463	chr9	83833935	83834696	+	0	NA	Intergenic	B1F|SINE|Alu	-8073	NM_199195	12040	Mm.12819	NM_199195	ENSMUSG00000032263	Bckdhb	-	branched chain ketoacid dehydrogenase E1, beta polypeptide	protein-coding
common_peak2-21466-27-15-0.991545950895236-1.66700866096458	chr11	87426255	87426933	+	0	NA	intron (NM_133215, intron 16 of 18)	intron (NM_133215, intron 16 of 18)	-4072	NM_001045527	327992	Mm.390371	NM_001045527	ENSMUSG00000070345	Hsf5	Gm739|MLZ-220	heat shock transcription factor family member 5	protein-coding
unique_peak1-4507-9-3-1.18961340640422-1.57096726280955	chr3	21963378	21963904	+	0	NA	Intergenic	MLT1A0|LTR|MaLR	-11933	NM_030732	81004	Mm.202966	NM_030732	ENSMUSG00000027630	Tbl1xr1	8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1	transducin (beta)-like 1X-linked receptor 1	protein-coding
common_peak2-20326-10-12--0.344024373132323-0.340565874754526	chr10	108445322	108445953	+	0	NA	intron (NM_001252341, intron 1 of 11)	intron (NM_001252341, intron 1 of 11)	2394	NM_009306	20979	Mm.289702	NM_009306	ENSMUSG00000035864	Syt1	AW124717|G630098F17Rik|SytI	synaptotagmin I	protein-coding
common_peak1-14256-65-82-0.117126508130203-0.381858126774364	chr2	155381493	155382534	+	0	NA	intron (NM_019811, intron 8 of 17)	intron (NM_019811, intron 8 of 17)	653	NR_040613	74945	Mm.401956	NR_040613	ENSMUSG00000086529	Acss2os	4930471I20Rik	acyl-CoA synthetase short-chain family member 2, opposite strand	ncRNA
common_peak2-27014-38-33-0.483989818048191-0.907712525274296	chr2	173263898	173265043	+	0	NA	Intergenic	Intergenic	-83623	NM_028158	72221	Mm.46132	NM_028158	ENSMUSG00000027518	1700021F07Rik	-	RIKEN cDNA 1700021F07 gene	protein-coding
unique_peak1-2443-9-1-2.18961340640422-2.31132995230379	chr15	101918718	101919359	+	0	NA	intron (NM_145625, intron 6 of 14)	intron (NM_145625, intron 6 of 14)	-14381	NM_153533	209039	Mm.29389	NM_153533	ENSMUSG00000037003	Tenc1	C1-ten|nep|nph	tensin like C1 domain-containing phosphatase	protein-coding
common_peak2-26327-29-53--0.642597421548357-1.10619710598095	chr2	34371202	34372916	+	0	NA	intron (NM_001290625, intron 5 of 11)	intron (NM_001290625, intron 5 of 11)	109688	NM_001290626	227743	Mm.270866	NM_177345	ENSMUSG00000038696	Mapkap1	AI591529|D230039K05Rik|Sin1	mitogen-activated protein kinase associated protein 1	protein-coding
unique_peak1-3990-15-2-2.4272022498345-3.53487848679804	chr2	34873923	34874767	+	0	NA	intron (NM_010406, intron 21 of 40)	intron (NM_010406, intron 21 of 40)	42616	NM_010406	15139	Mm.2168	NM_010406	ENSMUSG00000026874	Hc	C5|C5a|He	hemolytic complement	protein-coding
common_peak2-20773-15-22--0.511397205501357-0.50761186003982	chr10	117224105	117224549	+	0	NA	intron (NM_134010, intron 4 of 27)	B1_Mm|SINE|Alu	5434	NM_134010	103468	Mm.12568	NM_134010	ENSMUSG00000052798	Nup107	AW541137|C76801	nucleoporin 107	protein-coding
common_peak1-17767-86-155--0.309766424829895-0.952084785123399	chr7	90442012	90444094	+	0	NA	Intergenic	Intergenic	-290388	NM_177695	233424	Mm.486619	NM_177695		Tmc3	9030203A06	transmembrane channel-like gene family 3	protein-coding
unique_peak1-2757-7-2-1.21412832957703-1.45399745587252	chr17	5051997	5052465	+	0	NA	intron (NM_001085355, intron 2 of 19)	B1_Mur3|SINE|Alu	57157	NM_001085355	239985	Mm.133401	NM_001085355	ENSMUSG00000069729	Arid1b	8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235	AT rich interactive domain 1B (SWI-like)	protein-coding
unique_peak2-37465-4-7--1.02346051385325-1.09384600808989	chr5	113180290	113180729	+	0	NA	intron (NM_028901, intron 39 of 43)	intron (NM_028901, intron 39 of 43)	-41803	NR_040675	67360	Mm.59218	NR_040675	ENSMUSG00000098230	1700095B10Rik	-	RIKEN cDNA 1700095B10 gene	ncRNA
unique_peak2-35440-3-8--1.58390809140159-1.39487600375387	chr17	35077558	35078117	+	0	NA	Intergenic	RMER17C|LTR|ERVK	9639	NM_010893	18010	Mm.8856	NM_010893		Neu1	AA407268|AA407316|Aglp|Apl|Bat-7|Bat7|G9|Map-2|Neu|Neu-1	neuraminidase 1	protein-coding
common_peak2-22264-12-6-0.841421063030034-1.58711810488664	chr13	5844819	5845114	+	0	NA	Intergenic	Intergenic	12372	NR_045891	71867	Mm.179181	NR_045891		1700016G22Rik	-	RIKEN cDNA 1700016G22 gene	ncRNA
unique_peak1-1518-10-0-3.35641534500877-3.31132995230379	chr13	6633159	6633654	+	0	NA	intron (NM_001291071, intron 2 of 21)	intron (NM_001291071, intron 2 of 21)	14611	NM_019703	56421	Mm.273874	NM_019703	ENSMUSG00000021196	Pfkp	1200015H23Rik|9330125N24Rik|ATP-PFK|PFK-C|PFK-P	phosphofructokinase, platelet	protein-coding
common_peak1-14762-17-14-0.311405742596519-0.466170754204149	chr3	88333950	88334683	+	0	NA	Intergenic	Intergenic	-2001	NM_001029890	72640	Mm.275154	NM_001029890	ENSMUSG00000074480	Mex3a	2700083E18Rik|Gm411|Rkhd4	mex3 homolog A (C. elegans)	protein-coding
common_peak1-14825-31-16-1.13777582956278-2.15838218998676	chr3	90600041	90601463	+	0	NA	Intergenic	L1Md_F3|LINE|L1	69924	NM_207263	384997	Mm.316644	NM_207263	ENSMUSG00000042250	Pglyrp4	Gm1478|Gm413	peptidoglycan recognition protein 4	protein-coding
unique_peak2-39614-6-5--0.0195643903408542-0.947717972411649	chr9	88327294	88327703	+	0	NA	intron (NM_172926, intron 1 of 27)	B1_Mus2|SINE|Alu	6291	NM_172926	244962	Mm.439873	NM_172926	ENSMUSG00000032422	Snx14	B830022K16|C330035N22Rik|YR-14	sorting nexin 14	protein-coding
common_peak1-19180-11-17--0.661231417190699-0.58239619684445	chr9	98498722	98499252	+	0	NA	intron (NM_025485, intron 1 of 7)	intron (NM_025485, intron 1 of 7)	3111	NM_025485	64655	Mm.17949	NM_025485	ENSMUSG00000032459	Mrps22	3100002P07Rik|Rpms22	mitochondrial ribosomal protein S22	protein-coding
common_peak1-16582-80-110-0.0561599000192459-0.325159453073329	chr5	147429617	147431252	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-33619	NM_001010941	14738	Mm.153539	NM_008151	ENSMUSG00000041468	Gpr12	Gpcr01|Gpcr12|Gpcr20|Gpcr21	G-protein coupled receptor 12	protein-coding
common_peak1-13493-22-11-1.06232160436625-1.51503956548638	chr2	32439580	32440489	+	0	NA	TTS (NM_198191)	TTS (NM_198191)	-2564	NM_001276425	20448	Mm.27446	NM_011373	ENSMUSG00000079442	St6galnac4	SIAT7-D|ST6GalNAcIV|Siat7d	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4	protein-coding
common_peak2-22128-12-14--0.25811461052088-0.309074325783021	chr12	84772470	84773088	+	0	NA	intron (NM_001267625, intron 1 of 10)	L1MA5|LINE|L1	55907	NM_001267626	70127	Mm.151308	NM_058212	ENSMUSG00000021221	Dpf3	2810403B03Rik|6530402L11Rik|BAF45C|C78788|CERD4|cer-d4	D4, zinc and double PHD fingers, family 3	protein-coding
unique_peak1-744-11-5-0.923731083530457-1.477227296591	chr10	111550128	111550707	+	0	NA	Intergenic	L1_Mus2|LINE|L1	30007	NM_026223	67537	Mm.292351	NM_026223	ENSMUSG00000020214	Glipr1l2	4921508O11Rik	GLI pathogenesis-related 1 like 2	protein-coding
common_peak1-17891-24-23-0.208247402046561-0.407645899519042	chr7	118934375	118935379	+	0	NA	Intergenic	Intergenic	-11386	NM_173739	233733	Mm.323322	NM_173739	ENSMUSG00000038296	Galnt18	2900011G21Rik|BC024988|Galntl4	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 18	protein-coding
common_peak2-27387-33-57--0.526643432602043-0.951347777694914	chr3	87616979	87618052	+	0	NA	exon (NM_011832, exon 18 of 22)	exon (NM_011832, exon 18 of 22)	16642	NM_011832	23920	Mm.42041	NM_011832	ENSMUSG00000005640	Insrr	Irr	insulin receptor-related receptor	protein-coding
common_peak1-16209-99-99-0.575501553507927-2.50509033401589	chr5	96160646	96162744	+	0	NA	exon (NM_198667, exon 4 of 4).2	exon (NM_198667, exon 4 of 4).2	3497	NM_001270457	666203	Mm.380154	NM_001270457	ENSMUSG00000096139	Gm7978	EG666203	predicted gene 7978	protein-coding
common_peak1-10283-12-7-0.648775985087639-0.697979855752659	chr13	62558020	62558542	+	0	NA	intron (NM_178875, intron 2 of 3)	MurSatRep1|Unknown|Unknown	9891	NM_178875	71508	Mm.442497	NM_178875		Zfp935	8430426H19Rik|Es113	zinc finger protein 935	protein-coding
common_peak1-19367-29-32-0.0678959612566574-0.330208782692001	chrX	18161582	18162525	+	0	NA	Intergenic	L1Md_T|LINE|L1	-123653	NM_175228	75905	Mm.159617	NM_175228	ENSMUSG00000037358	4930578C19Rik	-	RIKEN cDNA 4930578C19 gene	protein-coding
unique_peak1-3886-14-3-1.89921616035764-2.80787975886178	chr2	14621378	14621990	+	0	NA	intron (NM_023116, intron 2 of 13)	intron (NM_023116, intron 2 of 13)	-20585	NR_028497	625342	Mm.484784	NR_028497		Gm13315	OTTMUSG00000011384	lactate dehydrogenase A pseudogene	pseudo
common_peak1-13081-41-65--0.343245414509793-0.615335714844035	chr19	6909350	6910426	+	0	NA	intron (NM_019924, intron 8 of 17)	intron (NM_019924, intron 8 of 17)	5229	NM_019924	56613	Mm.20914	NM_019924	ENSMUSG00000024952	Rps6ka4	1110069D02Rik|90kDa|AI848992|Msk2|mMSK2	ribosomal protein S6 kinase, polypeptide 4	protein-coding
unique_peak1-7375-8-1-2.00522241794757-2.05605744720049	chrX	68684414	68684877	+	0	NA	intron (NM_138309, intron 5 of 8)	B3|SINE|B2	61379	NM_138309	171486	Mm.283879	NM_138309	ENSMUSG00000035776	Cd99l2	AW548191|Mic2l1|Xap89	CD99 antigen-like 2	protein-coding
unique_peak2-35199-2-7--1.91745425626332-1.45399745587252	chr16	76139835	76140277	+	0	NA	intron (NR_040575, intron 1 of 2)	RLTR4_MM-int|LTR|ERV1	17198	NR_040575	78215	Mm.243885	NR_040575		4930578N18Rik	-	RIKEN cDNA 4930578N18 gene	ncRNA
unique_peak1-414-6-2-0.980435609659146-1.26211192963361	chr1	159773038	159773523	+	0	NA	Intergenic	Lx6|LINE|L1	316979	NM_001159986	89867	Mm.87114	NM_033354	ENSMUSG00000026589	Sec16b	Lztr2|Rgpr|Rgpr-p117	SEC16 homolog B (S. cerevisiae)	protein-coding
common_peak1-13991-12-8-0.478850983645327-0.562038191119709	chr2	103295103	103295802	+	0	NA	intron (NM_009804, intron 11 of 12)	MIRc|SINE|MIR	29858	NM_009804	12359	Mm.4215	NM_009804	ENSMUSG00000027187	Cat	2210418N07|Cas-1|Cas1|Cs-1	catalase	protein-coding
common_peak2-32208-16-14-0.211373046659543-0.364171515310935	chr9	120866192	120866853	+	0	NA	intron (NM_001165902, intron 11 of 14)	intron (NM_001165902, intron 11 of 14)	2318	NR_106058	102465661		NR_106058		Mir7090	mmu-mir-7090	microRNA mir-7090	ncRNA
common_peak1-7639-15-31--0.987835249444344-1.35897270024963	chr1	66817137	66817801	+	0	NA	intron (NM_001122738, intron 5 of 14)	intron (NM_001122738, intron 5 of 14)	46700	NM_177645	68691	Mm.240912	NM_177645	ENSMUSG00000026004	Kansl1l	1110028C15Rik|1190030G24|AI427598|C430010P07Rik|mKIAA4189	KAT8 regulatory NSL complex subunit 1-like	protein-coding
common_peak1-7911-31-44--0.266614425516551-0.432554671146866	chr1	136345254	136346099	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	-6456	NM_153128	240756	Mm.87398	NM_153128	ENSMUSG00000026455	Klhl12	C3ip1	kelch-like 12	protein-coding
common_peak1-10973-58-89--0.195903161439178-0.430360740609959	chr15	28024766	28026155	+	0	NA	Intergenic	Intergenic	-69857	NM_001081302	223435	Mm.485422	NM_001081302	ENSMUSG00000022263	Trio	6720464I07Rik|AA408740|Solo	triple functional domain (PTPRF interacting)	protein-coding
common_peak1-18499-23-20-0.32945008173032-0.471456499375596	chr8	85719510	85720646	+	0	NA	intron (NM_027758, intron 1 of 17)	intron (NM_027758, intron 1 of 17)	30827	NM_027758	71310	Mm.24031	NM_027758	ENSMUSG00000031709	Tbc1d9	4933431N12Rik|AI847101|AW490653|C76116	TBC1 domain family, member 9	protein-coding
common_peak1-15034-10-19--0.965512749878593-0.917676348953458	chr3	121645606	121646039	+	0	NA	Intergenic	Intergenic	-10422	NM_172525	214137	Mm.229287	NM_172525	ENSMUSG00000039831	Arhgap29	6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1	Rho GTPase activating protein 29	protein-coding
unique_peak1-1154-10-7-0.356415345008769-1.12966497611638	chr11	98873405	98873927	+	0	NA	intron (NM_011623, intron 10 of 35)	B2_Mm2|SINE|B2	11837	NM_011623	21973	Mm.4237	NM_011623	ENSMUSG00000020914	Top2a	Top-2	topoisomerase (DNA) II alpha	protein-coding
unique_peak2-35650-12-20--0.743541437691122-0.625923329873571	chr18	64077161	64077992	+	0	NA	intron (NM_001014981, intron 22 of 27)	L1_Rod|LINE|L1	209227	NM_001014981	104082	Mm.30850	NM_001014981	ENSMUSG00000040560	Wdr7	AI462727|TRAG|mKIAA0541	WD repeat domain 7	protein-coding
unique_peak2-35208-6-13--1.2419568116773-1.58711810488664	chr16	87103197	87103758	+	0	NA	Intergenic	Intergenic	-250953	NM_001159331	67768	Mm.296532	NM_026366	ENSMUSG00000044442	N6amt1	5830445C04Rik|Hemk2|Pred28	N-6 adenine-specific DNA methyltransferase 1 (putative)	protein-coding
unique_peak2-32728-8-8--0.164702583494742-1.00793137938329	chr1	162139566	162139998	+	0	NA	intron (NM_009786, intron 1 of 5)	intron (NM_009786, intron 1 of 5)	3241	NM_009786	12301	Mm.10702	NM_009786	ENSMUSG00000014226	Cacybp	SIP	calcyclin binding protein	protein-coding
common_peak1-11314-59-32-1.28096988151412-4.91596923656203	chr15	85012104	85014640	+	0	NA	Intergenic	Intergenic	-23066	NM_010180	14114	Mm.297992	NM_010180	ENSMUSG00000006369	Fbln1	-	fibulin 1	protein-coding
common_peak2-28198-14-16--0.188246680892695-0.308035960714963	chr4	116763542	116764470	+	0	NA	Intergenic	B1_Mur4|SINE|Alu	-4955	NM_008958	19207	Mm.287037	NM_008958	ENSMUSG00000028681	Ptch2	ptc2	patched homolog 2	protein-coding
common_peak1-9372-113-108-0.680485420919783-3.77838162788867	chr11	98026237	98027773	+	0	NA	intron (NM_001080118, intron 13 of 16)	B2_Mm2|SINE|B2	-16075	NM_028149	72194	Mm.218350	NM_028149	ENSMUSG00000020883	Fbxl20	2610511F20Rik|4632423N09Rik|AI849362|AL117906|C86145|Fbl2|Scr|mKIAA4147	F-box and leucine-rich repeat protein 20	protein-coding
common_peak1-16863-103-110-0.493581879509934-2.03712620911996	chr6	56796272	56798422	+	0	NA	intron (NM_012056, intron 1 of 9)	(CTCA)n|Simple_repeat|Simple_repeat	15294	NM_012056	27055	Mm.20943	NM_012056	ENSMUSG00000029781	Fkbp9	1810014L23|AW549641|FKBP-63|FKBP-9|FKBP60|FKBP63|FKBP65RS	FK506 binding protein 9	protein-coding
common_peak2-28689-14-16--0.188246680892695-0.308035960714963	chr5	33334836	33335404	+	0	NA	3' UTR (NM_001170567, exon 43 of 43)	3' UTR (NM_001170567, exon 43 of 43)	-26345	NM_011738	22629	Mm.332314	NM_011738	ENSMUSG00000018965	Ywhah	-	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide	protein-coding
common_peak1-8367-28-37--0.194968393622123-0.350690697593776	chr10	59907903	59908766	+	0	NA	intron (NR_045556, intron 14 of 68)	intron (NR_045556, intron 14 of 68)	45860	NM_001164374	100302688	Mm.444135	NM_001164374	ENSMUSG00000090439	Gm17455	-	predicted gene, 17455	protein-coding
unique_peak2-37927-19-47--1.18227517405947-2.51566814918164	chr5	146230803	146232198	+	0	NA	promoter-TSS (NM_007820)	promoter-TSS (NM_007820)	-908	NM_007820	13114	Mm.378905	NM_007820	ENSMUSG00000038656	Cyp3a16	-	cytochrome P450, family 3, subfamily a, polypeptide 16	protein-coding
common_peak2-24861-14-14--0.00767443525087419-0.308519316180257	chr17	78735982	78736692	+	0	NA	intron (NM_015800, intron 8 of 16)	intron (NM_015800, intron 8 of 16)	81155	NM_001285949	225020	Mm.236835	NM_199448	ENSMUSG00000056121	Fez2	9030616F16|D17Ertd315e	fasciculation and elongation protein zeta 2 (zygin II)	protein-coding
common_peak1-9947-27-57--0.866435044232336-1.84665509793009	chr12	110850007	110850921	+	0	NA	TTS (NR_029770)	TTS (NR_029770)	432	NR_035419	100316669		NR_035419	miRBase:MI0006290	Mir1188	Mirn1188|mmu-mir-1188	microRNA 1188	ncRNA
unique_peak1-3050-9-0-3.18961340640422-3.01029995663981	chr18	5834031	5834556	+	0	NA	Intergenic	RLTR28|LTR|ERVL	-241858	NR_033552	791318	Mm.84339	NR_033552	ENSMUSG00000063087	Gm10125	ENSMUSG00000063087|Zeb1os	predicted gene 10125	ncRNA
common_peak1-12417-11-14--0.398197011356905-0.379391706698377	chr17	74395651	74396123	+	0	NA	intron (NM_053188, intron 1 of 4)	intron (NM_053188, intron 1 of 4)	1369	NM_053188	94224	Mm.38933	NM_053188	ENSMUSG00000038541	Srd5a2	5ART2|S5AR 2	steroid 5 alpha-reductase 2	protein-coding
common_peak1-14020-37-39-0.204064976598456-0.426350872773373	chr2	112379082	112380151	+	0	NA	intron (NM_028844, intron 2 of 5)	intron (NM_028844, intron 2 of 5)	-20223	NM_001165935	74268	Mm.315125	NM_028844		Aven	1700013A01Rik|1700056A21Rik|mAven-L|mAven-S	apoptosis, caspase activation inhibitor	protein-coding
common_peak1-18110-47-54-0.153481711241888-0.393610822453554	chr8	3424740	3426567	+	0	NA	intron (NM_133962, intron 1 of 19)	intron (NM_133962, intron 1 of 19)	32645	NM_133962	102098	Mm.170461	NM_133962	ENSMUSG00000004568	Arhgef18	AI467246|D030053O22Rik	rho/rac guanine nucleotide exchange factor (GEF) 18	protein-coding
unique_peak1-5680-8-0-3.00522241794757-2.70926996097583	chr6	32350549	32351021	+	0	NA	intron (NM_175750, intron 3 of 31)	intron (NM_175750, intron 3 of 31)	-110356	NR_040277	319849	Mm.440860	NR_040277	ENSMUSG00000086763	Plxna4os1	B230378P21Rik	plexin A4, opposite strand 1	ncRNA
unique_peak1-3354-9-1-2.18961340640422-2.31132995230379	chr19	32259948	32260571	+	0	NA	intron (NM_144792, intron 5 of 9)	intron (NM_144792, intron 5 of 9)	25244	NM_001168526	208449	Mm.329810	NM_144792	ENSMUSG00000040451	Sgms1	9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23	sphingomyelin synthase 1	protein-coding
unique_peak2-37941-4-5--0.608423014574403-0.909929411522249	chr5	147963972	147964377	+	0	NA	Intergenic	Intergenic	-36098	NM_008178	14842	Mm.4797	NM_008178	ENSMUSG00000053129	Gsx1	Gsh-1|Gsh1	GS homeobox 1	protein-coding
common_peak2-31257-14-13-0.0918612383000403-0.332077462497413	chr8	70776079	70776782	+	0	NA	Intergenic	Intergenic	-23997	NM_028182	72281	Mm.40974	NM_028182	ENSMUSG00000053886	Sh2d4a	2210402M20Rik|SH2A	SH2 domain containing 4A	protein-coding
unique_peak1-1129-8-4-0.683294323060208-1.21878474469819	chr11	95210366	95210840	+	0	NA	intron (NM_172543, intron 1 of 7)	intron (NM_172543, intron 1 of 7)	12271	NM_172543	215512	Mm.262113	NM_172543	ENSMUSG00000038893	Fam117a	5730593F17Rik|AW548096	family with sequence similarity 117, member A	protein-coding
unique_peak1-4086-83-2-5.32926012438497-32.8884805549062	chr2	71543820	71545991	+	0	NA	Intergenic	MTD|LTR|MaLR	-12569	NR_037979	381371	Mm.330284	NM_201366	ENSMUSG00000064263	Gm1631	-	predicted gene 1631	ncRNA
common_peak2-26358-22-27--0.160070816970199-0.317737750275047	chr2	38286784	38287420	+	0	NA	Intergenic	MIR3|SINE|MIR	-80115	NM_021606	59126	Mm.143818	NM_021606	ENSMUSG00000026749	Nek6	1300007C09Rik	NIMA (never in mitosis gene a)-related expressed kinase 6	protein-coding
unique_peak1-1694-9-4-0.867685311516858-1.36011389749466	chr13	75944426	75944995	+	0	NA	Intergenic	Intergenic	-32624	NM_053108	93692	Mm.25844	NM_053108	ENSMUSG00000021591	Glrx	C86710|D13Wsu156e|Glrx1|Grx1|TTase	glutaredoxin	protein-coding
common_peak1-19271-47-89--0.557011671563127-1.44267101396302	chr9	116174484	116175935	+	0	NA	Intergenic	Intergenic	-90728	NM_009371	21813	Mm.172346	NM_009371	ENSMUSG00000032440	Tgfbr2	1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII	transforming growth factor, beta receptor II	protein-coding
common_peak1-9938-7-8--0.370834171144123-1.00793137938329	chr12	108244577	108245102	+	0	NA	Intergenic	Intergenic	-290305	NR_015512	71033	Mm.159404	NR_015512	ENSMUSG00000085820	4933406K04Rik	4930426M03Rik|4930485I22Rik|4933427G14Rik	RIKEN cDNA 4933406K04 gene	ncRNA
unique_peak2-37156-10-38--1.92898687385348-4.08266706494568	chr4	40970370	40971512	+	0	NA	intron (NM_023739, intron 22 of 23)	intron (NM_023739, intron 22 of 23)	24228	NM_007473	11832	Mm.8728	NM_007473	ENSMUSG00000028427	Aqp7	AQP7L|AQPap	aquaporin 7	protein-coding
common_peak1-18369-11-11--0.0762689164695427-0.301029995663976	chr8	70512885	70513604	+	0	NA	Intergenic	Intergenic	-14771	NM_177698	234353	Mm.32525	NM_027626	ENSMUSG00000030465	Psd3	4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D	pleckstrin and Sec7 domain containing 3	protein-coding
unique_peak2-35235-4-6--0.830815435910851-0.989110657569874	chr16	92691618	92691937	+	0	NA	intron (NM_001111022, intron 3 of 6)	intron (NM_001111022, intron 3 of 6)	5797	NM_001111023	12394	Mm.4081	NM_009821	ENSMUSG00000022952	Runx1	AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b	runt related transcription factor 1	protein-coding
common_peak2-29817-15-18--0.235762762887929-0.326591483156968	chr6	91440797	91441583	+	0	NA	intron (NM_009531, intron 15 of 15)	intron (NM_009531, intron 15 of 15)	17445	NM_028766	74122	Mm.38801	NM_028766	ENSMUSG00000030095	Tmem43	1200015A22Rik|LUMA	transmembrane protein 43	protein-coding
common_peak2-28999-5-5--0.289342836727009-0.909929411522249	chr5	108434096	108434401	+	0	NA	Intergenic	Intergenic	-18152	NM_026062	67266	Mm.277897	NM_026062	ENSMUSG00000029270	Fam69a	2900024C23Rik|AI315274	family with sequence similarity 69, member A	protein-coding
common_peak2-24642-10-11--0.228547155712387-0.31137425193576	chr17	35120741	35121273	+	0	NA	intron (NM_001204274, intron 2 of 4)	intron (NM_001204274, intron 2 of 4)	1932	NM_030597	27756	Mm.165735	NM_030597	ENSMUSG00000007050	Lsm2	D17H6S56E-2|D17H6S56E2|Dmapl|Dmpkap|G7b|Sm-X5|SmX5|snRNP	LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	protein-coding
unique_peak1-1921-14-6-1.09186123830004-1.16633110333236	chr14	75828892	75829488	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-26599	NM_001128093	380918	Mm.484360	NM_001128093	ENSMUSG00000091722	Siah3	Gm912	seven in absentia homolog 3 (Drosophila)	protein-coding
common_peak1-11668-35-29-0.524479662853985-0.895935469411238	chr16	25417694	25419012	+	0	NA	intron (NM_175165, intron 5 of 5)	intron (NM_175165, intron 5 of 5)	131450	NM_175165	71338	Mm.126851	NM_175165	ENSMUSG00000048399	Tprg	5430420C16Rik|Tprg1	transformation related protein 63 regulated	protein-coding
common_peak1-8712-39-48-0.00105140280394522-0.303268666669768	chr11	96829312	96830812	+	0	NA	intron (NM_030220, intron 1 of 6)	intron (NM_030220, intron 1 of 6)	8940	NM_030220	78912	Mm.491183	NM_030220	ENSMUSG00000018678	Sp2	4930480I16Rik|mKIAA0048	Sp2 transcription factor	protein-coding
common_peak1-18973-23-46--0.832821347168557-1.52341724501299	chr9	56041901	56042577	+	0	NA	Intergenic	Intergenic	-33362	NM_019793	56434	Mm.28484	NM_019793	ENSMUSG00000032324	Tspan3	1700055K04Rik|TM4-A|Tm4sf8	tetraspanin 3	protein-coding
common_peak1-13130-62-45-0.887189502745072-3.0174654376981	chr19	9078953	9081280	+	0	NA	exon (NM_009643, exon 5 of 5)	exon (NM_009643, exon 5 of 5)	16342	NM_001286518	66395	Mm.203866	NM_009643	ENSMUSG00000069833	Ahnak	DY6	AHNAK nucleoprotein (desmoyokin)	protein-coding
common_peak1-15294-18-37--0.935008362215234-1.41893667893732	chr4	42949769	42950486	+	0	NA	intron (NM_172690, intron 5 of 9)	intron (NM_172690, intron 5 of 9)	-15839	NM_019874	56323	Mm.20437	NM_019874	ENSMUSG00000036052	Dnajb5	1110058L06Rik|AI462558|Hsc40|Hsp40-3	DnaJ (Hsp40) homolog, subfamily B, member 5	protein-coding
unique_peak2-40002-6-13--1.2419568116773-1.58711810488664	chrX	166238935	166239687	+	0	NA	intron (NM_001290512, intron 2 of 9)	intron (NM_001290512, intron 2 of 9)	-21744	NR_003635	66747	Mm.34441	NM_025743	ENSMUSG00000055357	4933400A11Rik	-	capping protein (actin filament) muscle Z-line, alpha 1 pseudogene	pseudo
unique_peak2-33962-6-7--0.434601889619698-0.97990265578305	chr12	80367532	80368165	+	0	NA	intron (NM_001008550, intron 21 of 41)	intron (NM_001008550, intron 21 of 41)	29421	NM_001008550	211978	Mm.297919	NM_001008550	ENSMUSG00000066440	Zfyve26	4930465A13|9330197E15Rik|A630028O16Rik|Gm893|mKIAA0321	zinc finger, FYVE domain containing 26	protein-coding
common_peak2-28411-20-24--0.155781405183531-0.319918318021793	chr4	141344869	141345487	+	0	NA	intron (NM_172338, intron 1 of 14)	intron (NM_172338, intron 1 of 14)	1381	NM_172338	214063	Mm.39102	NM_172338		Dnajc16	2900037O03Rik|4732437J24Rik|D030060M24|mKIAA0962	DnaJ (Hsp40) homolog, subfamily C, member 16	protein-coding
common_peak1-14158-17-8-1.04837133676273-1.30305656033811	chr2	136617895	136618615	+	0	NA	Intergenic	L1Md_F3|LINE|L1	79069	NM_001291056	20614	Mm.45953	NM_011428	ENSMUSG00000027273	Snap25	Bdr|GENA70|SNAP-25|SUP|sp	synaptosomal-associated protein 25	protein-coding
unique_peak2-39574-2-10--2.37688587490062-2.09384600808989	chr9	73968368	73968859	+	0	NA	intron (NM_001033500, intron 1 of 19)	intron (NM_001033500, intron 1 of 19)	10472	NM_001033500	546144	Mm.335289	NM_177908	ENSMUSG00000044976	Wdr72	AW558070|D230040E23	WD repeat domain 72	protein-coding
common_peak1-17316-55-113--0.628270143012039-2.08027013622182	chr6	143166481	143168064	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-27136	NR_027803	52285	Mm.354898	NM_001033129		D6Ertd474e	1700001I24Rik|AU023129	DNA segment, Chr 6, ERATO Doi 474, expressed	ncRNA
unique_peak1-5481-10-4-1.03448725012141-1.5150158574804	chr5	130181763	130182178	+	0	NA	Intergenic	ORR1E|LTR|MaLR	-6007	NM_172462	22648	Mm.135067	NM_172462	ENSMUSG00000051034	Zfp11	6720465D24|Krox-6|Zfp-11	zinc finger protein 11	protein-coding
unique_peak2-39921-9-15--0.81038659359578-0.630231561310125	chrX	102188744	102189485	+	0	NA	Intergenic	Intergenic	76349	NR_015467	71445	Mm.242968	NR_015467	ENSMUSG00000087174	5530601H04Rik	AI835882	RIKEN cDNA 5530601H04 gene	ncRNA
unique_peak2-35869-1-5--2.2120195109379-1.32905871926422	chr18	79105802	79106219	+	0	NA	intron (NM_053099, intron 3 of 5)	intron (NM_053099, intron 3 of 5)	200120	NM_053099	240427	Mm.312871	NM_053099	ENSMUSG00000024548	Setbp1	C130092E12|Seb|mKIAA0437	SET binding protein 1	protein-coding
unique_peak1-4073-45-12-2.15991830720378-7.44526547036654	chr2	65744529	65746433	+	0	NA	intron (NM_153409, intron 3 of 6)	intron (NM_153409, intron 3 of 6)	-24441	NM_001290665	77771	Mm.102025	NM_153409	ENSMUSG00000044647	Csrnp3	A330102K23Rik|CSRNP-3|Csnrp3|Mbu1|taip-2	cysteine-serine-rich nuclear protein 3	protein-coding
unique_peak2-33873-3-4--0.73591118484664-0.864171920961574	chr12	24724416	24724796	+	0	NA	Intergenic	MTE2a|LTR|MaLR	57528	NM_001256489	66808	Mm.379124	NM_001256489		9030624G23Rik	-	RIKEN cDNA 9030624G23 gene	protein-coding
common_peak2-25961-125-140-0.484274026660757-2.40463348957171	chr19	47918072	47920530	+	0	NA	Intergenic	RLTR45-int|LTR|ERVK	-7450	NM_027559	100048534	Mm.29457	NM_027559	ENSMUSG00000044948	Cfap43	4632415N18Rik|4930428C11Rik|4930463G05Rik|AI429486|D19Ertd652e|Wdr96	cilia and flagella associated protein 43	protein-coding
common_peak1-9438-9-15--0.81038659359578-0.630231561310125	chr11	102297283	102297864	+	0	NA	TTS (NM_199200)	TTS (NM_199200)	5937	NM_008175	14824	Mm.1568	NM_008175	ENSMUSG00000034708	Grn	Pgrn|epithelin	granulin	protein-coding
common_peak1-9926-95-145--0.0419092138560035-0.307839615036113	chr12	101975054	101976742	+	0	NA	Intergenic	Intergenic	-12660	NM_153587	73086	Mm.220417	NM_153587	ENSMUSG00000021180	Rps6ka5	3110005L17Rik|6330404E13Rik|AI854034|MSK1|MSPK1|RLPK	ribosomal protein S6 kinase, polypeptide 5	protein-coding
common_peak1-13378-70-26-1.86507941421193-9.97392296298625	chr19	46477834	46479907	+	0	NA	intron (NM_001025391, intron 2 of 11)	B1_Mur2|SINE|Alu	7484	NM_015752	24069	Mm.41210	NM_015752	ENSMUSG00000025231	Sufu	Su(fu)	suppressor of fused homolog (Drosophila)	protein-coding
common_peak2-27504-18-31--0.687080848771648-0.820293215674341	chr3	95106034	95106914	+	0	NA	intron (NM_001085383, intron 5 of 12)	intron (NM_001085383, intron 5 of 12)	4252	NM_001085383	71790	Mm.218844	NM_023628	ENSMUSG00000015702	Anxa9	1110003P15Rik|2310069F17Rik	annexin A9	protein-coding
common_peak1-16452-14-17--0.270708841084668-0.328191099940267	chr5	135689071	135689868	+	0	NA	intron (NM_011714, intron 6 of 18)	intron (NM_011714, intron 6 of 18)	26276	NM_011714	22385	Mm.40331	NM_011714	ENSMUSG00000002748	Baz1b	C87820|WSTF|Wbscr9	bromodomain adjacent to zinc finger domain, 1B	protein-coding
common_peak2-31269-16-22--0.405298313788951-0.440610794044987	chr8	71469124	71469825	+	0	NA	Intergenic	L1_Mus3|LINE|L1	65020	NM_008509	16956	Mm.1514	NM_008509	ENSMUSG00000015568	Lpl	-	lipoprotein lipase	protein-coding
common_peak1-14619-37-30-0.571796761098944-1.03797455172871	chr3	52401248	52402412	+	0	NA	Intergenic	MLT2B1|LTR|ERVL	-141816	NR_038079	329639	Mm.131245	NR_038079		Gm2447	100039832|A530017F20	predicted gene 2447	ncRNA
unique_peak2-37627-2-6--1.72480917832092-1.26211192963361	chr5	66550977	66551262	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-7926	NM_001127382	245945	Mm.36863	NM_139065	ENSMUSG00000070780	Rbm47	9530077J19Rik	RNA binding motif protein 47	protein-coding
common_peak1-7651-38-29-0.664562063690012-1.32967515660734	chr1	74081569	74082873	+	0	NA	intron (NM_001289895, intron 3 of 32)	intron (NM_001289895, intron 3 of 32)	88800	NM_027884	21961	Mm.309975	NM_027884	ENSMUSG00000055322	Tns1	1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns	tensin 1	protein-coding
unique_peak2-34752-3-5--0.998945590680433-0.96108193396963	chr15	54999834	55000243	+	0	NA	intron (NM_145470, intron 3 of 8)	T-rich|Low_complexity|Low_complexity	35047	NM_001037937	97998	Mm.295397	NM_145470	ENSMUSG00000022419	Deptor	Depdc6	DEP domain containing MTOR-interacting protein	protein-coding
unique_peak2-34895-7-6--0.00826409175941478-0.97990265578305	chr15	81360399	81360814	+	0	NA	Intergenic	Intergenic	-56038	NM_177821	328572	Mm.258397	NM_177821	ENSMUSG00000055024	Ep300	A430090G16|A730011L11|KAT3B|p300|p300 HAT	E1A binding protein p300	protein-coding
common_peak1-16700-8-22--1.51833953810944-1.77631109801764	chr6	18845601	18846084	+	0	NA	Intergenic	AT_rich|Low_complexity|Low_complexity	29524	NM_001167757	75196	Mm.67665	NM_029202	ENSMUSG00000029517	Ankrd7	4930532L20Rik|AV278427	ankyrin repeat domain 7	protein-coding
unique_peak2-39371-6-8--0.60452689106201-1.03789460276074	chr9	14922590	14923209	+	0	NA	Intergenic	RLTR41|LTR|ERV1	-6347	NM_001164797	244698	Mm.325134	NM_001164797	ENSMUSG00000031936	Hephl1	Gm509|Zp|zyklopen	hephaestin-like 1	protein-coding
unique_peak2-36518-10-20--1.03590207776999-1.03889213727317	chr2	160872660	160873455	+	0	NA	intron (NM_173368, intron 3 of 36)	intron (NM_173368, intron 3 of 36)	61735	NM_173368	71389	Mm.122738	NM_173368	ENSMUSG00000057133	Chd6	5430439G14Rik|6330406J24Rik|CHD-6	chromodomain helicase DNA binding protein 6	protein-coding
unique_peak2-37519-0-5--3.42509343119537-1.32905871926422	chr5	21290764	21291129	+	0	NA	promoter-TSS (NM_011188)	promoter-TSS (NM_011188)	37	NM_009584	22791	Mm.266312	NM_009584	ENSMUSG00000029014	Dnajc2	AU020218|MIDA1|Zrf1|Zrf2	DnaJ (Hsp40) homolog, subfamily C, member 2	protein-coding
unique_peak1-321-22-9-1.32535601020004-2.00244947055753	chr1	132095815	132096933	+	0	NA	intron (NM_172485, intron 26 of 27)	L1Md_A|LINE|L1	223202	NM_007827	13137	Mm.436759	NM_007827	ENSMUSG00000026401	Daf2	AI323748|Cd55b|Daf|Daf-TM|TM-DAF	decay accelerating factor 2	protein-coding
common_peak2-22398-9-21--1.26981821223308-1.37307999835977	chr13	33004101	33004836	+	0	NA	Intergenic	MTE-int|LTR|MaLR	-14459	NM_173051	380839	Mm.250802	NM_173051		Serpinb1c	EIC|ovalbumin	serine (or cysteine) peptidase inhibitor, clade B, member 1c	protein-coding
common_peak1-12872-32-25-0.578652301078568-0.97145127402441	chr18	76160904	76161686	+	0	NA	intron (NM_145356, intron 2 of 4)	intron (NM_145356, intron 2 of 4)	96830	NR_045365	73009	Mm.443541	NR_045365		2900057B20Rik	-	RIKEN cDNA 2900057B20 gene	ncRNA
unique_peak2-36862-8-6-0.197867495889966-1.03789460276074	chr3	90503113	90503506	+	0	NA	Intergenic	Intergenic	-3666	NM_009114	20202	Mm.2128	NM_009114	ENSMUSG00000056071	S100a9	60B8Ag|AW546964|BEE22|Cagb|GAGB|L1Ag|MRP14|p14	S100 calcium binding protein A9 (calgranulin B)	protein-coding
common_peak2-30755-15-14-0.105274154947137-0.330004445983672	chr7	120865933	120866649	+	0	NA	Intergenic	Intergenic	-43221	NM_145584	233744	Mm.334160	NM_145584	ENSMUSG00000038156	Spon1	AI666765|AW455831|BC020531|D330035F22Rik|FSP	spondin 1, (f-spondin) extracellular matrix protein	protein-coding
common_peak2-25712-19-12-0.702247608520594-0.840839978588874	chr19	21603170	21603736	+	0	NA	Intergenic	RLTR28|LTR|ERVL	-56302	NM_010266	14544	Mm.45054	NM_010266	ENSMUSG00000058624	Gda	AU015411|AW047581	guanine deaminase	protein-coding
unique_peak1-2148-8-4-0.683294323060208-1.21878474469819	chr15	58996550	58997036	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-83212	NM_144800	211401	Mm.215481	NM_144800	ENSMUSG00000022353	Mtss1	2310003N14Rik|BC024131|D130001D01Rik|Mim|mKIAA0429	metastasis suppressor 1	protein-coding
common_peak1-12736-11-14--0.398197011356905-0.379391706698377	chr18	54987074	54987681	+	0	NA	Intergenic	URR1A|DNA|MER1_type	162457	NM_175751	269023	Mm.192984	NM_175751	ENSMUSG00000052713	Zfp608	4932417D18Rik|D430007A19Rik|Znf608	zinc finger protein 608	protein-coding
common_peak2-22250-14-13-0.0918612383000403-0.332077462497413	chr13	112770587	112771300	+	0	NA	Intergenic	Intergenic	-171752	NM_011945	26401	Mm.15918	NM_011945	ENSMUSG00000021754	Map3k1	MAPKKK1|MEKK1|Mekk	mitogen-activated protein kinase kinase kinase 1	protein-coding
unique_peak1-5027-10-7-0.356415345008769-1.12966497611638	chr4	130792571	130793082	+	0	NA	Intergenic	Arthur1|DNA|Tip100	292526	NM_010769	17180	Mm.271796	NM_010769	ENSMUSG00000040533	Matn1	CMP|Crtm|Mat1|matrilin-1	matrilin 1, cartilage matrix protein	protein-coding
unique_peak2-37192-10-19--0.965512749878593-0.917676348953458	chr4	57955229	57956296	+	0	NA	TTS (NM_011660)	TTS (NM_011660)	13521	NM_011660	22166	Mm.260618	NM_011660	ENSMUSG00000028367	Txn1	ADF|AW550880|Trx1|Txn	thioredoxin 1	protein-coding
unique_peak2-36918-4-6--0.830815435910851-0.989110657569874	chr3	99163061	99163487	+	0	NA	Intergenic	L1Md_T|LINE|L1	105591	NM_009323	21384	Mm.88761	NM_009323	ENSMUSG00000027868	Tbx15	Tbx14|Tbx8|de	T-box 15	protein-coding
common_peak2-27475-23-49--0.922088685265644-1.85759988472352	chr3	92210929	92211797	+	0	NA	promoter-TSS (NM_011475)	promoter-TSS (NM_011475)	-550	NM_011475	20763	Mm.196439	NM_011475	ENSMUSG00000042157	Sprr2i	-	small proline-rich protein 2I	protein-coding
common_peak1-12443-28-56--0.779930894343279-1.6064785466786	chr17	80061433	80062469	+	0	NA	intron (NM_201361, intron 5 of 10)	intron (NM_201361, intron 5 of 10)	47711	NM_201361	381110	Mm.293063	NM_201361	ENSMUSG00000036368	Rmdn2	AW061290|Fam82a1|RMD-2|mRMD-2	regulator of microtubule dynamics 2	protein-coding
common_peak1-13779-23-26--0.0331199976543877-0.301029995663988	chr2	37442300	37443258	+	0	NA	intron (NM_009261, intron 15 of 16)	intron (NM_009261, intron 15 of 16)	60026	NM_009261	20744	Mm.237095	NM_009261	ENSMUSG00000026915	Strbp	6430510M02Rik|AI852513|C230082I21Rik|C86322|Spnr	spermatid perinuclear RNA binding protein	protein-coding
common_peak2-20697-37-108--1.24219125329111-5.87808416904471	chr10	93160717	93162052	+	0	NA	intron (NM_021320, intron 3 of 9)	intron (NM_021320, intron 3 of 9)	-15317	NR_038017	100504069	Mm.391412	NR_038017	ENSMUSG00000085723	Gm15915	OTTMUSG00000027787	predicted gene 15915	ncRNA
common_peak1-17842-16-7-1.11826364226806-1.23399803405144	chr7	111023631	111024479	+	0	NA	Intergenic	L1Md_F2|LINE|L1	6700	NM_013618	18367	Mm.445781	NM_013618	ENSMUSG00000058200	Olfr66	5'[b]1|5'beta1|MOR1-3|ORL532	olfactory receptor 66	protein-coding
unique_peak1-323-10-3-1.35641534500877-1.75805390616669	chr1	132334016	132334736	+	0	NA	Intergenic	Intergenic	-14800	NM_007827	13137	Mm.436759	NM_007827	ENSMUSG00000026401	Daf2	AI323748|Cd55b|Daf|Daf-TM|TM-DAF	decay accelerating factor 2	protein-coding
common_peak2-32164-7-7--0.200909169701811-0.97990265578305	chr9	110316266	110316688	+	0	NA	Intergenic	Intergenic	-5763	NM_001081043	104831	Mm.335477	NM_001081043	ENSMUSG00000036057	Ptpn23	AI462446|PTP-TD14	protein tyrosine phosphatase, non-receptor type 23	protein-coding
unique_peak2-39490-9-14--0.717277189204299-0.53895475198017	chr9	58581394	58582060	+	0	NA	intron (NM_028598, intron 1 of 5)	intron (NM_028598, intron 1 of 5)	7639	NM_028598	73673	Mm.205196	NM_028598	ENSMUSG00000074269	Rec114	2410076I21Rik|4930527A11Rik	REC114 meiotic recombination protein	protein-coding
unique_peak2-36602-6-10--0.894033508256995-1.21398586181642	chr2	177839755	177840264	+	0	NA	Intergenic	MYSERV16_I-int|LTR|ERVK	-13671	NM_001177789	74189	Mm.44413	NM_028806	ENSMUSG00000027525	Phactr3	1500003N10Rik|4930415A02Rik|H17739|Scapin1|Scapinin|mKIAA4224	phosphatase and actin regulator 3	protein-coding
unique_peak2-36028-0-5--3.42509343119537-1.32905871926422	chr19	42795122	42795552	+	0	NA	Intergenic	B1_Mur3|SINE|Alu	31928	NM_029011	74580	Mm.329858	NM_029011	ENSMUSG00000060224	Pyroxd2	3830409H07Rik|4833409A17Rik	pyridine nucleotide-disulphide oxidoreductase domain 2	protein-coding
unique_peak1-6447-10-1-2.35641534500877-2.57096726280955	chr7	99304595	99305047	+	0	NA	intron (NM_001243046, intron 4 of 14)	intron (NM_001243046, intron 4 of 14)	-78659	NM_001243047	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
unique_peak1-1998-24-8-1.6232849013254-2.85636458546265	chr15	88849586	88850746	+	0	NA	intron (NM_031260, intron 16 of 26)	intron (NM_031260, intron 16 of 26)	36742	NM_031260	83456	Mm.358791	NM_031260	ENSMUSG00000015365	Mov10l1	CHAMP|Csm	Moloney leukemia virus 10-like 1	protein-coding
common_peak1-8578-28-23-0.467996619100306-0.690880484874617	chr10	99203455	99204503	+	0	NA	Intergenic	Intergenic	18313	NM_027945	71832	Mm.483162	NM_027945	ENSMUSG00000046934	Csl	1700007H16Rik	citrate synthase like	protein-coding
unique_peak2-34183-5-10--1.16381195464315-1.33892459842472	chr13	36578749	36579207	+	0	NA	intron (NM_001039189, intron 5 of 5)	intron (NM_001039189, intron 5 of 5)	247368	NM_153529	68404	Mm.232930	NM_153529	ENSMUSG00000039114	Nrn1	0710008J23Rik|Cpg15|Nrn	neuritin 1	protein-coding
unique_peak1-3575-9-6-0.382258484346616-1.11707584880836	chr19	29050248	29050789	+	0	NA	Intergenic	Intergenic	-11874	NM_198651	381218	Mm.280653	NM_198651	ENSMUSG00000064202	4430402I18Rik	AW122618|Spata6l	RIKEN cDNA 4430402I18 gene	protein-coding
common_peak1-13812-17-31--0.781703661794962-0.932560489028298	chr2	51140505	51141504	+	0	NA	intron (NR_040636, intron 1 of 2)	intron (NR_040636, intron 1 of 2)	43653	NR_040636	329404	Mm.417725	NR_040636	ENSMUSG00000086349	Gm13497	A730015I17|OTTMUSG00000012425	predicted gene 13497	ncRNA
unique_peak2-36981-4-5--0.608423014574403-0.909929411522249	chr3	117058905	117059308	+	0	NA	intron (NM_177664, intron 1 of 6)	intron (NM_177664, intron 1 of 6)	4688	NM_177664	229791	Mm.140138	NM_177664	ENSMUSG00000044667	Lppr4	A330086D10|D3Bwg0562e|PRG-1|mKIAA0455	lipid phosphate phosphatase-related protein type 4	protein-coding
common_peak2-30524-11-7-0.508693584251613-1.21681515183528	chr7	66450639	66451070	+	0	NA	Intergenic	Lx8|LINE|L1	-33266	NM_173010	22215	Mm.9002	NM_011668	ENSMUSG00000025326	Ube3a	4732496B02|5830462N02Rik|A130086L21Rik|Hpve6a|mKIAA4216	ubiquitin protein ligase E3A	protein-coding
unique_peak1-5291-10-5-0.771452844287613-1.33892459842472	chr5	66559929	66560555	+	0	NA	intron (NR_040695, intron 2 of 2)	intron (NR_040695, intron 2 of 2)	-17049	NM_001127382	245945	Mm.36863	NM_139065	ENSMUSG00000070780	Rbm47	9530077J19Rik	RNA binding motif protein 47	protein-coding
unique_peak2-37428-0-5--3.42509343119537-1.32905871926422	chr4	150237919	150238355	+	0	NA	intron (NM_133753, intron 1 of 3)	intron (NM_133753, intron 1 of 3)	8937	NM_133753	74155	Mm.318841	NM_133753	ENSMUSG00000028967	Errfi1	1300002F13Rik|AI788755|Mig-6|Mig6|RALT	ERBB receptor feedback inhibitor 1	protein-coding
common_peak2-29545-53-106--0.600493973985218-1.81383555926888	chr6	39591941	39593179	+	0	NA	intron (NM_139294, intron 14 of 21)	intron (NM_139294, intron 14 of 21)	49978	NM_026612	68198	Mm.29415	NM_026612	ENSMUSG00000002416	Ndufb2	1810011O01Rik|8kDa|AGGG|AI325567|CI-AGGG	NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2	protein-coding
common_peak2-24540-10-8-0.186490343566457-1.078512453669	chr17	27780759	27781211	+	0	NA	Intergenic	Intergenic	-8798	NM_025963	67097	Mm.275810	NM_025963	ENSMUSG00000052146	Rps10	2210402A09Rik	ribosomal protein S10	protein-coding
common_peak1-8427-21-10-1.11005764662894-1.59083646988122	chr10	77151011	77151900	+	0	NA	intron (NM_001287074, intron 1 of 11)	intron (NM_001287074, intron 1 of 11)	2047	NM_001205032	100502831	Mm.486158	NM_001205032	ENSMUSG00000095970	Gm19402	-	predicted gene, 19402	protein-coding
common_peak1-12680-40-55--0.148379239306506-0.333814721158525	chr18	38249678	38250874	+	0	NA	Intergenic	Intergenic	-91653	NM_001205336	106952	Mm.247642	NM_139206	ENSMUSG00000024451	Arap3	Centd3|Drag1|E030006K04Rik|cnt-d3	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3	protein-coding
common_peak2-28900-24-33--0.294252938482622-0.390124689062463	chr5	91139047	91140041	+	0	NA	Intergenic	(TC)n|Simple_repeat|Simple_repeat	-48780	NM_009141	20311	Mm.4660	NM_009141	ENSMUSG00000029371	Cxcl5	AMCF-II|ENA-78|GCP-2|LIX|Scyb5|Scyb6	chemokine (C-X-C motif) ligand 5	protein-coding
common_peak1-8291-31-33-0.137775829562784-0.350690697593776	chr10	30802673	30803808	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-229971	NM_027168	69692	Mm.245537	NM_027168	ENSMUSG00000000295	Hddc2	2310057G13Rik	HD domain containing 2	protein-coding
common_peak1-15939-178-204-0.558810713430977-4.44869720864295	chr5	28316473	28318063	+	0	NA	Intergenic	MERVL-int|LTR|ERVL	-80684	NM_153526	231070	Mm.30221	NM_153526	ENSMUSG00000045294	Insig1	1810013C12Rik|Insig-1	insulin induced gene 1	protein-coding
common_peak1-11884-39-49--0.0280949428555708-0.301029995663988	chr16	96081803	96083529	+	0	NA	intron (NR_040484, intron 1 of 3)	intron (NR_040484, intron 1 of 3)	37654	NR_040485	69776	Mm.120470	NR_040484	ENSMUSG00000086899	1600002D24Rik	-	RIKEN cDNA 1600002D24 gene	ncRNA
common_peak2-22061-16-18--0.129663871175524-0.307235046933848	chr12	71136116	71137026	+	0	NA	intron (NM_001081453, intron 19 of 28)	L1MC4a|LINE|L1	-48582	NM_022028	64010	Mm.390480	NM_022028	ENSMUSG00000021067	Sav1	1700040G09Rik|Salv|Sav|WW45|Wwp3|Wwp4	salvador homolog 1 (Drosophila)	protein-coding
unique_peak1-7147-9-3-1.18961340640422-1.57096726280955	chr9	57432979	57433588	+	0	NA	intron (NM_022813, intron 7 of 8)	L1M4|LINE|L1	-3976	NM_027895	71742	Mm.155877	NM_027895	ENSMUSG00000032308	Ulk3	1200015E14Rik	unc-51-like kinase 3	protein-coding
common_peak2-20925-15-37--1.23576276288793-2.15838218998677	chr11	6414940	6415635	+	0	NA	intron (NM_178440, intron 9 of 21)	intron (NM_178440, intron 9 of 21)	5674	NM_178440	246177	Mm.239554	NM_178440	ENSMUSG00000020437	Myo1g	E430002D17Rik	myosin IG	protein-coding
common_peak1-12471-16-14-0.211373046659543-0.364171515310935	chr17	84110522	84111380	+	0	NA	intron (NM_001171053, intron 2 of 13)	B1_Mus2|SINE|Alu	5448	NM_001171052	116871	Mm.277668	NM_054082	ENSMUSG00000055817	Mta3	1110002J22Rik|mKIAA1266	metastasis associated 3	protein-coding
common_peak2-26744-70-123--0.334229394011476-0.916450677904792	chr2	132577257	132578602	+	0	NA	Intergenic	Intergenic	-29085	NM_007694	12653	Mm.255241	NM_007694	ENSMUSG00000027350	Chgb	Scg-1	chromogranin B	protein-coding
common_peak2-26299-18-21--0.146512467408946-0.306326795069975	chr2	32287372	32288116	+	0	NA	intron (NM_001164357, intron 1 of 9)	B1_Mur4|SINE|Alu	-1073	NM_001164358	227731	Mm.37395	NM_146118	ENSMUSG00000026819	Slc25a25	1110030N17Rik|MCSC|mKIAA1896	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25	protein-coding
unique_peak2-32995-7-8--0.370834171144123-1.00793137938329	chr10	60823307	60823774	+	0	NA	intron (NM_013753, intron 1 of 19)	intron (NM_013753, intron 1 of 19)	22731	NM_013753	27355	Mm.269699	NM_013753	ENSMUSG00000020092	Pald1	MMPAL|Pald|mKIAA1274	phosphatase domain containing, paladin 1	protein-coding
common_peak2-23675-34-25-0.681628808860174-1.24799833770813	chr15	85673454	85674487	+	0	NA	intron (NM_001033337, intron 6 of 13)	intron (NM_001033337, intron 6 of 13)	11236	NM_001033337	239570	Mm.151748	NM_001033337	ENSMUSG00000035944	Ttc38	9030019H09	tetratricopeptide repeat domain 38	protein-coding
common_peak1-9591-21-17-0.399564263823923-0.561823156887258	chr11	119267681	119268524	+	0	NA	Intergenic	Intergenic	16316	NR_035453	100316690		NR_035453	miRBase:MI0009921	Mir1932	mmu-mir-1932	microRNA 1932	ncRNA
common_peak2-29454-61-87--0.076682288887957-0.321469269268128	chr6	24663428	24665532	+	0	NA	Intergenic	RLTR1B|LTR|ERV1	-18765	NM_028920	74409	Mm.87331	NM_028920	ENSMUSG00000029679	Hyal6	4932701A20Rik|Hyal-ps1|Hyalp1	hyaluronoglucosaminidase 6	protein-coding
unique_peak2-37648-12-11-0.0638134843664826-0.337263207250336	chr5	90641032	90641595	+	0	NA	Intergenic	Intergenic	11708	NR_028088	231430	Mm.319697	NM_001033310	ENSMUSG00000035505	Cox18	BC038311	cytochrome c oxidase assembly protein 18	protein-coding
common_peak2-28179-17-30--0.735899972181837-0.841847921495509	chr4	109666631	109667441	+	0	NA	Intergenic	Lx7|LINE|L1	16406	NM_172296	242620	Mm.32825	NM_172296	ENSMUSG00000047143	Dmrta2	Dmrt5	doublesex and mab-3 related transcription factor like family A2	protein-coding
common_peak1-7677-10-7-0.356415345008769-1.12966497611638	chr1	77465282	77465848	+	0	NA	intron (NM_007936, intron 3 of 17)	intron (NM_007936, intron 3 of 17)	27778	NR_105770	102465180		NR_105770		Mir6352	mmu-mir-6352	microRNA mir-6352	ncRNA
common_peak2-22856-5-6--0.511735258063458-0.947717972411649	chr14	25823786	25824208	+	0	NA	Intergenic	Intergenic	138730	NR_045718	75862	Mm.109191	NR_045718		4930572O13Rik	-	RIKEN cDNA 4930572O13 gene	ncRNA
unique_peak2-34148-3-10--1.87341470859657-1.75805390616669	chr13	23933717	23934030	+	0	NA	intron (NM_001164743, intron 1 of 11)	intron (NM_001164743, intron 1 of 11)	2570	NM_134069	105355	Mm.27038	NM_134069	ENSMUSG00000036083	Slc17a3	AW261723|Npt4	solute carrier family 17 (sodium phosphate), member 3	protein-coding
unique_peak1-648-11-1-2.50869358425161-2.83420869758413	chr10	52170600	52171213	+	0	NA	Intergenic	L1Md_F2|LINE|L1	33553	NM_030250	52014	Mm.199964	NM_030250	ENSMUSG00000023068	Nus1	1600027K07Rik|AU019165|AW538011|BC003223|D10Ertd438e	nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)	protein-coding
common_peak1-11731-21-13-0.762134343208631-1.0220094258199	chr16	33399973	33401058	+	0	NA	intron (NM_011749, intron 1 of 8)	intron (NM_011749, intron 1 of 8)	19654	NM_011749	22661	Mm.392667	NM_011749	ENSMUSG00000022811	Zfp148	2210405J08Rik|AI480666|AW045217|BERF-1|BFCOL1|ZBP-89|Znf148	zinc finger protein 148	protein-coding
unique_peak2-35897-4-6--0.830815435910851-0.989110657569874	chr19	3912464	3912741	+	0	NA	TTS (NM_026316)	TTS (NM_026316)	172	NM_144870	225887	Mm.44227	NM_144870	ENSMUSG00000059734	Ndufs8	BC021616|CI-23kD|TYKY	NADH dehydrogenase (ubiquinone) Fe-S protein 8	protein-coding
common_peak2-22663-35-67--0.656092582787835-1.44728952217473	chr13	96542612	96543844	+	0	NA	intron (NM_027711, intron 2 of 35)	intron (NM_027711, intron 2 of 35)	76353	NM_010170	14064	Mm.440952	NM_010170	ENSMUSG00000021675	F2rl2	F730031A08|PAR3	coagulation factor II (thrombin) receptor-like 2	protein-coding
unique_peak1-2891-8-1-2.00522241794757-2.05605744720049	chr17	44152306	44152825	+	0	NA	intron (NM_001286654, intron 2 of 4)	AT_rich|Low_complexity|Low_complexity	62425	NM_030598	53901	Mm.251242	NM_030598	ENSMUSG00000039601	Rcan2	Csp2|Dscr1l1|MCIP2|ZAKI-4	regulator of calcineurin 2	protein-coding
unique_peak1-6528-13-0-3.77847203063777-4.51544993495972	chr7	121947597	121948188	+	0	NA	intron (NM_173767, intron 5 of 12)	intron (NM_173767, intron 5 of 12)	58612	NM_173767	233752	Mm.83037	NM_173767	ENSMUSG00000048782	Insc	3830422K02Rik|C730020D23	inscuteable homolog (Drosophila)	protein-coding
common_peak1-8767-19-12-0.702247608520594-0.840839978588874	chr11	6388431	6389215	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	-12744	NM_011221	19291	Mm.390332	NM_011221	ENSMUSG00000094483	Purb	2310015K15Rik|AA114818|Cager-2|D11Bwg0414e	purine rich element binding protein B	protein-coding
common_peak1-8246-23-28--0.136213490618491-0.317118655902079	chr10	18318518	18319374	+	0	NA	intron (NM_001033258, intron 29 of 33)	intron (NM_001033258, intron 29 of 33)	-53064	NM_019487	56016	Mm.35551	NM_019487	ENSMUSG00000019853	Hebp2	SOUL	heme binding protein 2	protein-coding
common_peak1-16665-86-51-1.27519607589126-7.42483874795657	chr6	137557296	137560528	+	0	NA	intron (NM_007945, intron 1 of 21)	MTEb|LTR|MaLR	38894	NM_001271588	13860	Mm.235346	NM_007945	ENSMUSG00000015766	Eps8	AW261790	epidermal growth factor receptor pathway substrate 8	protein-coding
unique_peak2-33515-3-7--1.41398308995928-1.23214870625617	chr11	75348480	75348933	+	0	NA	intron (NM_001199284, intron 2 of 13)	intron (NM_001199284, intron 2 of 13)	3092	NM_001199283	215113	Mm.11186	NM_173388	ENSMUSG00000038178	Slc43a2	7630402D21Rik|BC042513|Lat4	solute carrier family 43, member 2	protein-coding
common_peak2-20921-40-41-0.266658259972337-0.537526587463064	chr11	6199523	6200650	+	0	NA	intron (NM_001252287, intron 2 of 22)	intron (NM_001252287, intron 2 of 22)	7525	NM_001252288	18293	Mm.276348	NM_010956	ENSMUSG00000020456	Ogdh	2210403E04Rik|2210412K19Rik|AA409584|d1401|mKIAA4192	oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)	protein-coding
common_peak2-31735-12-13--0.158578936969966-0.301029995663979	chr9	14380283	14381005	+	0	NA	intron (NM_001081395, intron 3 of 12)	intron (NM_001081395, intron 3 of 12)	38800	NM_001081395	75723	Mm.159552	NM_001081395	ENSMUSG00000013076	Amotl1	2310010G08Rik|2310067L22Rik|4932416D09Rik|JEAP|mFLJ00155	angiomotin-like 1	protein-coding
common_peak2-24139-4-7--1.02346051385325-1.09384600808989	chr16	36694557	36695091	+	0	NA	intron (NM_001285788, intron 1 of 7)	intron (NM_001285788, intron 1 of 7)	760	NM_001285791	106347	Mm.17807	NM_134109	ENSMUSG00000022900	Ildr1	AU041483|AU044638	immunoglobulin-like domain containing receptor 1	protein-coding
common_peak2-32024-10-12--0.344024373132323-0.340565874754526	chr9	75764810	75765418	+	0	NA	Intergenic	MT2A|LTR|ERVL	-97670	NM_173731	208982	Mm.82306	NM_173731	ENSMUSG00000007908	Hmgcll1	BC037381	3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1	protein-coding
common_peak2-28535-103-144-0.108088655845106-0.405288483971646	chr5	142818980	142821764	+	0	NA	Intergenic	MTC|LTR|MaLR	-57079	NM_199068	17425	Mm.24214	NM_010812	ENSMUSG00000056493	Foxk1	A630048H08Rik|AI463295|ENSMUSG00000075577|Gm10868|Mnf	forkhead box K1	protein-coding
unique_peak1-2885-13-4-1.45654393575041-2.23384849113406	chr17	40874150	40874857	+	0	NA	Intergenic	MTB-int|LTR|MaLR	10434	NM_001038500	619517	Mm.391018	NM_001038500	ENSMUSG00000073396	Esp1	EG619517|Gm6084	exocrine gland secreted peptide 1	protein-coding
common_peak2-25950-147-115-1.04748793155512-10.0665627732697	chr19	47507943	47510218	+	0	NA	intron (NM_001164717, intron 1 of 13)	intron (NM_001164717, intron 1 of 13)	29821	NM_001164717	14218	Mm.127560	NM_008018	ENSMUSG00000053617	Sh3pxd2a	2310014D11Rik|AA589508|AI256723|AI413738|C230050L11|EG329070|Fish|Gm5098|Sh3md1|TSK5|Tks5	SH3 and PX domains 2A	protein-coding
unique_peak2-38473-6-4-0.24347001549294-0.989110657569874	chr7	29411230	29411653	+	0	NA	intron (NM_175319, intron 2 of 12)	B1_Mur1|SINE|Alu	4593	NM_175319	101744	Mm.26022	NM_175319	ENSMUSG00000037469	Papl	AU017076|C330005M16Rik	iron/zinc purple acid phospatase-like	protein-coding
common_peak2-27706-15-38--1.27323746830659-2.30508312501225	chr3	122274238	122275011	+	0	NA	intron (NM_001114665, intron 2 of 15)	MIRb|SINE|MIR	-30025	NR_106117	102465764		NR_106117		Mir7657	mmu-mir-7657	microRNA mir-7657	ncRNA
unique_peak2-37505-8-16--1.08224042330277-0.891319708951328	chr5	8893515	8894205	+	0	NA	5' UTR (NM_008830, exon 1 of 28)	5' UTR (NM_008830, exon 1 of 28)	139	NM_008830	18670	Mm.297825	NM_008830	ENSMUSG00000042476	Abcb4	Mdr2|Pgy-2|Pgy2|mdr-2	ATP-binding cassette, sub-family B (MDR/TAP), member 4	protein-coding
unique_peak2-32702-5-9--1.02630843089322-1.21398586181642	chr1	152497300	152497762	+	0	NA	intron (NM_001024720, intron 64 of 106)	intron (NM_001024720, intron 64 of 106)	-184236	NM_001110146	96875	Mm.174256	NM_021400	ENSMUSG00000006014	Prg4	CACP|DOL54|JCAP|MSF|SZP|lubricin	proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein)	protein-coding
unique_peak2-38560-5-7--0.704380336005853-1.01466476204226	chr7	64278094	64278542	+	0	NA	intron (NM_008074, intron 3 of 9)	L1Md_A|LINE|L1	363923	NM_008074	14407	Mm.434343	NM_008074		Gabrg3	B230362M20Rik|Gabrg-3	gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3	protein-coding
common_peak2-25677-28-21-0.593527501184165-0.884951936461256	chr19	11770127	11770845	+	0	NA	Intergenic	Lx|LINE|L1	-1059	NM_001033283	225923	Mm.297596	NM_001033283	ENSMUSG00000055933	Oosp3	Gm97	oocyte secreted protein 3	protein-coding
unique_peak1-1402-19-8-1.23276232521937-1.61268301619756	chr12	71888767	71889752	+	0	NA	Intergenic	Intergenic	-37242	NM_028127	319710	Mm.2962	NM_028127	ENSMUSG00000048285	Frmd6	2610019M19Rik|4930488L10Rik|AW212977	FERM domain containing 6	protein-coding
common_peak1-10467-14-15--0.100783839642355-0.301029995663982	chr13	111294306	111294970	+	0	NA	Intergenic	L1MC|LINE|L1	109386	NM_152804	20620	Mm.380	NM_152804	ENSMUSG00000021701	Plk2	Snk	polo-like kinase 2	protein-coding
unique_peak2-33244-6-13--1.2419568116773-1.58711810488664	chr10	126905187	126905781	+	0	NA	intron (NM_027900, intron 11 of 23)	intron (NM_027900, intron 11 of 23)	-33289	NM_177707	237611	Mm.32087	NM_177707	ENSMUSG00000040287	Stac3	9830125E18	SH3 and cysteine rich domain 3	protein-coding
common_peak1-17831-17-10-0.75886471956774-0.917676348953458	chr7	109613789	109614589	+	0	NA	intron (NM_009103, intron 16 of 18)	intron (NM_009103, intron 16 of 18)	12227	NM_001011782	257947	Mm.376117	NM_001011782	ENSMUSG00000044814	Olfr543	MOR42-2	olfactory receptor 543	protein-coding
unique_peak1-4388-11-1-2.50869358425161-2.83420869758413	chr2	163676339	163676860	+	0	NA	Intergenic	Intergenic	-2887	NM_001030292	241769	Mm.295337	NM_001030292	ENSMUSG00000035238	Kcnk15	KCNK11|KCNK14|KT3.3|TASK5	potassium channel, subfamily K, member 15	protein-coding
common_peak2-20593-37-45-0.0024311154288057-0.303416277109641	chr10	79668900	79670081	+	0	NA	Intergenic	Intergenic	-19853	NM_023431	68114	Mm.273418	NM_023431	ENSMUSG00000020156	Mum1	2610019J09|9430059D04Rik|UBE-1C2	melanoma associated antigen (mutated) 1	protein-coding
unique_peak1-1686-7-1-1.79909083029819-1.80617997398389	chr13	73764854	73765289	+	0	NA	exon (NM_009354, exon 2 of 16)	exon (NM_009354, exon 2 of 16)	622	NM_009354	21752	Mm.10109	NM_009354	ENSMUSG00000021611	Tert	EST2|TCS1|TP2|TR|TRT	telomerase reverse transcriptase	protein-coding
common_peak2-29060-16-17--0.0516613591742505-0.301029995663984	chr5	116024535	116025118	+	0	NA	intron (NM_172719, intron 3 of 57)	MIRb|SINE|MIR	-6132	NR_105996	102466790		NR_105996		Mir7029	mmu-mir-7029	microRNA mir-7029	ncRNA
unique_peak1-1506-10-4-1.03448725012141-1.5150158574804	chr13	3744758	3745160	+	0	NA	Intergenic	Intergenic	58605	NM_027416	70405	Mm.20079	NM_027416	ENSMUSG00000063130	Calml3	2310068O22Rik|AI326174	calmodulin-like 3	protein-coding
unique_peak2-37739-5-6--0.511735258063458-0.947717972411649	chr5	110135302	110135730	+	0	NA	Intergenic	ORR1A2|LTR|MaLR	127645	NR_027964	667213	Mm.454429	NR_027964		Gm10416	EG667213|ENSMUSG00000072761	zinc finger protein pseudogene	pseudo
common_peak2-30912-9-11--0.395349094316936-0.344532117358383	chr7	143799095	143799595	+	0	NA	Intergenic	Intergenic	102942	NR_046021	621677	Mm.207290	NR_046021		Gm6249	EG621677	predicted gene 6249	ncRNA
common_peak1-7615-21-33--0.517973575984104-0.610902792227722	chr1	60098228	60098958	+	0	NA	intron (NM_027407, intron 1 of 10)	intron (NM_027407, intron 1 of 10)	1338	NM_027407	70375	Mm.17834	NM_027407	ENSMUSG00000026018	Ica1l	1700030B17Rik|Als2cr15	islet cell autoantigen 1-like	protein-coding
unique_peak1-6808-15-0-4.01216475055566-5.11750992628768	chr8	71908360	71909025	+	0	NA	intron (NR_038043, intron 1 of 5)	RMER3D-int|LTR|ERVK	10751	NR_038044	378466	Mm.37846	NM_194351		Gm10033	9330175B10Rik|ENSMUSG00000057924|ENSMUSG00000071083|Gm10311	predicted gene 10033	ncRNA
common_peak2-21746-16-30--0.835932668118813-1.0921097739129	chr11	115869010	115869523	+	0	NA	TTS (NM_016905)	TTS (NM_016905)	4767	NM_016905	14635	Mm.2820	NM_016905	ENSMUSG00000020766	Galk1	AA409894|GALK|Gk|Glk|Glk1	galactokinase 1	protein-coding
unique_peak1-6359-7-3-0.799090830298189-1.23214870625617	chr7	66310994	66311516	+	0	NA	Intergenic	Intergenic	-172865	NM_173010	22215	Mm.9002	NM_011668	ENSMUSG00000025326	Ube3a	4732496B02|5830462N02Rik|A130086L21Rik|Hpve6a|mKIAA4216	ubiquitin protein ligase E3A	protein-coding
common_peak1-10409-76-114--0.0835456650810933-0.32537589687777	chr13	98315906	98317407	+	0	NA	Intergenic	Intergenic	-13299	NR_046157	328314	Mm.138047	NR_046157		Gm5086	B230311A21|EG328314	predicted gene 5086	ncRNA
common_peak2-27583-8-6-0.197867495889966-1.03789460276074	chr3	101212305	101212750	+	0	NA	intron (NM_207205, intron 2 of 10)	intron (NM_207205, intron 2 of 10)	31479	NM_207205	78908	Mm.257997	NM_207205	ENSMUSG00000042035	Igsf3	1700016K10Rik|2810035F16Rik|4833439O17Rik|mKIAA0466	immunoglobulin superfamily, member 3	protein-coding
common_peak2-30338-21-22-0.0459273092092225-0.319918318021793	chr7	25377463	25378443	+	0	NA	intron (NM_023154, intron 1 of 7)	intron (NM_023154, intron 1 of 7)	-5293	NM_001033205	101544	Mm.20117	NM_001033205	ENSMUSG00000066721	Zfp575	AI326876|Znf575	zinc finger protein 575	protein-coding
common_peak1-17289-14-10-0.439784541720347-0.519648556297791	chr6	135367806	135368538	+	0	NA	Intergenic	Intergenic	50661	NM_001288627	13730	Mm.182785	NM_010128	ENSMUSG00000030208	Emp1	I-8-09|TMP	epithelial membrane protein 1	protein-coding
unique_peak1-1561-13-4-1.45654393575041-2.23384849113406	chr13	28931315	28931985	+	0	NA	intron (NR_045053, intron 2 of 8)	PB1D7|SINE|Alu	45641	NR_045054	72518	Mm.37454	NR_045053		2610307P16Rik	AI666457	RIKEN cDNA 2610307P16 gene	ncRNA
unique_peak2-34710-4-7--1.02346051385325-1.09384600808989	chr15	32291230	32291690	+	0	NA	intron (NM_009154, intron 2 of 22)	RLTR18|LTR|ERVK	116892	NM_009154	20356	Mm.260374	NM_009154	ENSMUSG00000022231	Sema5a	5930434A13|9130201M22Rik|AI464145|Semaf|semF	sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A	protein-coding
unique_peak1-5405-10-3-1.35641534500877-1.75805390616669	chr5	105799756	105800258	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-24516	NM_001039647	634650	Mm.458435	NM_001039647	ENSMUSG00000092021	Gbp11	EG634650|Gm7141	guanylate binding protein 11	protein-coding
unique_peak2-34653-2-5--1.50241675698448-1.08602067057793	chr14	120278921	120279202	+	0	NA	Intergenic	Intergenic	130612	NR_045621	75432	Mm.443277	NR_045621		1700006F04Rik	-	RIKEN cDNA 1700006F04 gene	ncRNA
common_peak2-24799-13-4-1.45654393575041-2.23384849113406	chr17	66269817	66270208	+	0	NA	Intergenic	Intergenic	30515	NM_023053	65960	Mm.10153	NM_023053	ENSMUSG00000024098	Twsg1	1810013J15Rik|9030422N06Rik|AW552143|D17Ertd403e|Tsg|Twg	twisted gastrulation homolog 1 (Drosophila)	protein-coding
unique_peak1-1063-11-1-2.50869358425161-2.83420869758413	chr11	81448626	81449173	+	0	NA	intron (NM_001034013, intron 1 of 9)	intron (NM_001034013, intron 1 of 9)	-61858	NM_001033765	237880	Mm.435528	NM_001033765		1700071K01Rik	-	RIKEN cDNA 1700071K01 gene	protein-coding
unique_peak2-38961-2-7--1.91745425626332-1.45399745587252	chr8	32008767	32009271	+	0	NA	Intergenic	Intergenic	-191115	NM_025869	66959	Mm.23916	NM_025869	ENSMUSG00000039661	Dusp26	2310043K02Rik|Skrp3	dual specificity phosphatase 26 (putative)	protein-coding
unique_peak2-37808-7-6--0.00826409175941478-0.97990265578305	chr5	123697388	123697812	+	0	NA	intron (NM_026000, intron 5 of 5)	intron (NM_026000, intron 5 of 5)	19401	NM_026000	67151	Mm.278997	NM_026000	ENSMUSG00000029440	Psmd9	1500011J20Rik|2610202L11Rik|Bridge-1|P27	proteasome (prosome, macropain) 26S subunit, non-ATPase, 9	protein-coding
common_peak1-15954-26-18-0.679971578714877-0.959433126956265	chr5	30869093	30870234	+	0	NA	Intergenic	Intergenic	-20880	NM_010608	16527	Mm.439936	NM_010608	ENSMUSG00000049265	Kcnk3	TASK|Task-1|cTBAK-1	potassium channel, subfamily K, member 3	protein-coding
unique_peak2-38791-8-6-0.197867495889966-1.03789460276074	chr7	129877510	129877896	+	0	NA	intron (NM_019430, intron 1 of 3)	intron (NM_019430, intron 1 of 3)	62445	NM_019430	54376	Mm.444212	NM_019430		Cacng3	-	calcium channel, voltage-dependent, gamma subunit 3	protein-coding
common_peak1-12261-36-70--0.670426033336928-1.49065377724493	chr17	37002287	37003399	+	0	NA	intron (NM_001177872, intron 2 of 6)	intron (NM_001177872, intron 2 of 6)	1289	NM_001024134	69097	Mm.307027	NM_001024134	ENSMUSG00000050747	Trim15	1810012B10Rik	tripartite motif-containing 15	protein-coding
common_peak2-26259-24-23-0.208247402046561-0.407645899519042	chr2	30257752	30258853	+	0	NA	exon (NM_007760, exon 14 of 14)	exon (NM_007760, exon 14 of 14)	10528	NM_001290508	57170	Mm.285167	NM_020329	ENSMUSG00000026856	Dolpp1	0610011H20Rik|AB030189|LSFR2	dolichyl pyrophosphate phosphatase 1	protein-coding
common_peak2-25815-116-72-1.3043047746294-10.6846432876845	chr19	38033125	38035424	+	0	NA	exon (NM_001099634, exon 20 of 53)	exon (NM_001099634, exon 20 of 53)	83793	NM_001099634	226101	Mm.34674	NM_177035	ENSMUSG00000048612	Myof	2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3	myoferlin	protein-coding
unique_peak2-32782-6-7--0.434601889619698-0.97990265578305	chr1	179570783	179571242	+	0	NA	TTS (NR_037994)	TTS (NR_037994)	2062	NR_037994	75589	Mm.86666	NR_037994		2310043L19Rik	-	RIKEN cDNA 2310043L19 gene	ncRNA
unique_peak1-6000-14-4-1.57728806547028-2.4322161449009	chr6	100218654	100219466	+	0	NA	intron (NM_019743, intron 2 of 4)	intron (NM_019743, intron 2 of 4)	18292	NM_019743	56353	Mm.321633	NM_019743	ENSMUSG00000072872	Rybp	2410018J24Rik|DEDAF|YEAF1	RING1 and YY1 binding protein	protein-coding
unique_peak2-36588-1-7--2.62705701021674-1.80617997398389	chr2	175641207	175641546	+	0	NA	intron (NM_001099349, intron 1 of 4).5	intron (NM_001099349, intron 1 of 4).5	1853	NM_001099349	100043381		NM_001099349		Gm14308	OTTMUSG00000016254	predicted gene 14308	protein-coding
common_peak2-30408-20-21-0.0286431659538957-0.306080386793804	chr7	35347657	35348679	+	0	NA	Intergenic	RMER4A|LTR|ERVK	89692	NM_146188	233107	Mm.486198	NM_146188	ENSMUSG00000030499	Kctd15	BC031749	potassium channel tetramerisation domain containing 15	protein-coding
common_peak2-31176-88-175--0.444019209466765-1.81831040915782	chr8	46740042	46741771	+	0	NA	intron (NM_172752, intron 1 of 22)	ID4|SINE|ID	147764	NM_001205219	234214	Mm.211096	NM_172752	ENSMUSG00000031626	Sorbs2	2010203O03Rik|9430041O17Rik|A530071H08|Argbp2|mKIAA0777	sorbin and SH3 domain containing 2	protein-coding
common_peak2-22625-7-7--0.200909169701811-0.97990265578305	chr13	81136712	81137101	+	0	NA	intron (NR_015587, intron 1 of 1)	intron (NR_015587, intron 1 of 1)	33571	NR_015587	319983	Mm.343027	NR_015587	ENSMUSG00000097098	9330111N05Rik	-	RIKEN cDNA 9330111N05 gene	ncRNA
common_peak1-16553-11-7-0.508693584251613-1.21681515183528	chr5	144953701	144954458	+	0	NA	3' UTR (NM_010800, exon 2 of 2)	3' UTR (NM_010800, exon 2 of 2)	2924	NM_010800	17341	Mm.386767	NM_010800	ENSMUSG00000052271	Bhlha15	1810009C13Rik|Bhlhb8|MIST-1|Mist1	basic helix-loop-helix family, member a15	protein-coding
unique_peak2-38910-0-5--3.42509343119537-1.32905871926422	chr8	13747951	13748288	+	0	NA	Intergenic	Intergenic	-9571	NM_027276	69957	Mm.182412	NM_027276	ENSMUSG00000038416	Cdc16	2700071J12Rik|2810431D22Rik|APC6	CDC16 cell division cycle 16	protein-coding
common_peak1-13462-19-13-0.595332404604082-0.713635438203849	chr19	60581173	60581808	+	0	NA	Intergenic	MER5A|DNA|MER1_type	-37283	NM_201615	226278	Mm.377241	NM_201615	ENSMUSG00000045052	Prlhr	Gm339|Gpr10|Gr3|Prrpr	prolactin releasing hormone receptor	protein-coding
common_peak2-27059-25-39--0.460078189542257-0.621525249893804	chr2	181364950	181366378	+	0	NA	intron (NM_133701, intron 6 of 20)	ORR1D1|LTR|MaLR	29640	NM_133701	68879	Mm.292001	NM_133701	ENSMUSG00000002455	Prpf6	1190003A07Rik|2610031L17Rik|ANT-1|U5-102K	PRP6 pre-mRNA splicing factor 6 homolog (yeast)	protein-coding
common_peak1-9073-9-9--0.132314688483142-1.03275496310833	chr11	69410640	69411162	+	0	NA	Intergenic	B3|SINE|B2	8561	NM_013415	11932	Mm.235204	NM_013415	ENSMUSG00000041329	Atp1b2	Amog|Atpb-2	ATPase, Na+/K+ transporting, beta 2 polypeptide	protein-coding
unique_peak2-32678-5-18--1.95230784944944-1.99473478107052	chr1	135863833	135864916	+	0	NA	Intergenic	L3|LINE|CR1	-46396	NM_054077	116847	Mm.214514	NM_054077	ENSMUSG00000041577	Prelp	7330409J17Rik|SLRR2A	proline arginine-rich end leucine-rich repeat	protein-coding
unique_peak2-32874-0-6--3.64748585253182-1.56314192529759	chr10	8518613	8519017	+	0	NA	intron (NM_175155, intron 4 of 19)	intron (NM_175155, intron 4 of 19)	87053	NM_175155	70097	Mm.338275	NM_175155	ENSMUSG00000015305	Sash1	1100001C18Rik|2500002E12Rik|A330076K04Rik|mKIAA0790	SAM and SH3 domain containing 1	protein-coding
common_peak1-14074-8-7-0.00522241794757061-1.00793137938329	chr2	121092877	121093488	+	0	NA	intron (NM_001290830, intron 4 of 26)	B3|SINE|B2	3961	NM_001290830	27223	Mm.215389	NM_013735	ENSMUSG00000043909	Trp53bp1	53BP1|Tp53bp1|m53BP1|p53BP1	transformation related protein 53 binding protein 1	protein-coding
common_peak2-21367-11-8-0.338768582809301-1.14218153353838	chr11	78189099	78189380	+	0	NA	intron (NM_008238, intron 1 of 8)	MIRb|SINE|MIR	10871	NM_008238	15218	Mm.4496	NM_008238	ENSMUSG00000002057	Foxn1	D11Bhm185e|Fkh19|HFH-11|Hfh11|Whn|nu|nude	forkhead box N1	protein-coding
common_peak1-17064-11-9-0.186765489364251-0.344532117358383	chr6	99930132	99930789	+	0	NA	Intergenic	ORR1E|LTR|MaLR	-254074	NM_001170419	50501	Mm.87365	NM_015768	ENSMUSG00000030069	Prok2	Bv8|PK2|Prok1	prokineticin 2	protein-coding
common_peak1-17803-76-62-0.784664462363365-3.14259740156614	chr7	100473948	100475633	+	0	NA	Intergenic	Intergenic	246401	NM_021427	58238	Mm.113787	NM_021427		Fam181b	A830059I20Rik|AB041569	family with sequence similarity 181, member B	protein-coding
common_peak1-18872-18-23--0.272043349492805-0.34651636097721	chr9	22385012	22385784	+	0	NA	intron (NM_181316, intron 9 of 21)	intron (NM_181316, intron 9 of 21)	105239	NM_178415	319845	Mm.176725	NM_178415	ENSMUSG00000035919	Bbs9	E130103I17Rik	Bardet-Biedl syndrome 9 (human)	protein-coding
common_peak1-16557-79-91-0.305273211119607-0.862557343927818	chr5	145139133	145141126	+	0	NA	Intergenic	RSINE1|SINE|B4	20735	NR_102373	100579137		NR_102372		Dmr	-	Dmrt1 related	ncRNA
common_peak1-16381-8-8--0.164702583494742-1.00793137938329	chr5	123136735	123137355	+	0	NA	intron (NM_001038845, intron 12 of 12)	ORR1B1|LTR|MaLR	-20521	NM_011026	18438	Mm.290884	NM_011026	ENSMUSG00000029470	P2rx4	AI504491|AW555605|D5Ertd444e|P2X4	purinergic receptor P2X, ligand-gated ion channel 4	protein-coding
unique_peak1-1318-8-1-2.00522241794757-2.05605744720049	chr12	4125366	4125883	+	0	NA	Intergenic	Intergenic	-7773	NM_001159536	104111	Mm.489807	NM_138305	ENSMUSG00000020654	Adcy3	AC3|mKIAA0511	adenylate cyclase 3	protein-coding
common_peak1-14774-39-10-2.15632962828186-6.40113897434953	chr3	88683358	88684566	+	0	NA	intron (NM_001242372, intron 14 of 32)	intron (NM_001242372, intron 14 of 32)	33910	NM_144898	229524	Mm.440405	NM_144898	ENSMUSG00000068922	Msto1	BC008103|mst	misato homolog 1 (Drosophila)	protein-coding
unique_peak1-4292-15-5-1.4272022498345-1.61682445937017	chr2	144198325	144199043	+	0	NA	intron (NM_001164813, intron 1 of 1)	intron (NM_001164813, intron 1 of 1)	3913	NM_181417	228714	Mm.227925	NM_181417	ENSMUSG00000027425	Csrp2bp	2510008M08Rik|ATAC2|AU023459|D2Ertd473e|D2Wsu131e|E430020F17	cysteine and glycine-rich protein 2 binding protein	protein-coding
common_peak2-31326-9-9--0.132314688483142-1.03275496310833	chr8	82346599	82347076	+	0	NA	Intergenic	L1Md_F2|LINE|L1	111118	NM_026904	68999	Mm.257445	NM_026904	ENSMUSG00000036977	Anapc10	1500026N15Rik|A830003M23Rik|APC10	anaphase promoting complex subunit 10	protein-coding
common_peak1-7674-11-7-0.508693584251613-1.21681515183528	chr1	77460290	77460797	+	0	NA	intron (NM_007936, intron 3 of 17)	intron (NM_007936, intron 3 of 17)	32800	NR_105770	102465180		NR_105770		Mir6352	mmu-mir-6352	microRNA mir-6352	ncRNA
common_peak2-30136-2-13--2.72480917832092-2.79529063155376	chr6	140548041	140548707	+	0	NA	Intergenic	RLTR42-int|LTR|ERVK	-22810	NM_178803	11569	Mm.86453	NM_009637	ENSMUSG00000030232	Aebp2	AU023766|B230313N05Rik	AE binding protein 2	protein-coding
unique_peak1-1093-9-2-1.60465090568306-1.87199725847353	chr11	88584805	88585336	+	0	NA	intron (NR_038058, intron 2 of 3)	ID4_|SINE|ID	5113	NR_038058	193280	Mm.396842	NR_038058		C030037D09Rik	9330160M04	RIKEN cDNA C030037D09 gene	ncRNA
common_peak2-27735-9-7-0.18961340640422-1.05908390183068	chr3	126560790	126561216	+	0	NA	Intergenic	L1_Mur3|LINE|L1	85301	NM_001034168	109676	Mm.220242	NM_178655	ENSMUSG00000032826	Ank2	AI835472|AW491075|Ank-2	ankyrin 2, brain	protein-coding
common_peak1-9373-13-19--0.543456064249594-0.466170754204149	chr11	98148923	98149567	+	0	NA	Intergenic	Intergenic	25325	NR_039579	100628613		NR_039579	miRBase:MI0018028	Mir5119	mmu-mir-5119|mu-mir-5119	microRNA 5119	ncRNA
common_peak2-20269-8-6-0.197867495889966-1.03789460276074	chr1	190902715	190903061	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-71169	NM_172650	226823	Mm.209880	NM_172650	ENSMUSG00000026608	Kctd3	4930438A20Rik|9330185B06|E330032J19Rik|NY-REN-45	potassium channel tetramerisation domain containing 3	protein-coding
unique_peak2-38164-7-8--0.370834171144123-1.00793137938329	chr6	87869065	87869656	+	0	NA	intron (NM_173737, intron 3 of 6)	MTD|LTR|MaLR	5390	NM_173737	232210	Mm.246241	NM_173737	ENSMUSG00000030060	Hmces	8430410A17Rik|C85376	5-hydroxymethylcytosine (hmC) binding, ES cell specific	protein-coding
common_peak1-7693-57-50-0.593607698107434-1.55705293866515	chr1	82808524	82810232	+	0	NA	Intergenic	RMER2|LTR|ERV1	-26680	NM_010472	15463	Mm.392569	NM_010472	ENSMUSG00000026159	Agfg1	AU045498|C130049H11Rik|C85612|D730048C23Rik|Hrb|RAB|Rip	ArfGAP with FG repeats 1	protein-coding
unique_peak2-37150-5-7--0.704380336005853-1.01466476204226	chr4	40721372	40721765	+	0	NA	Intergenic	Intergenic	-16650	NM_021535	74255	Mm.289929	NM_021535		Smu1	2600001O03Rik|2610203K23Rik|AB044414|AI845086|AW556129|Bwd	smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)	protein-coding
common_peak2-26857-16-18--0.129663871175524-0.307235046933848	chr2	155242892	155243681	+	0	NA	intron (NM_001242558, intron 7 of 12)	intron (NM_001242558, intron 7 of 12)	23233	NM_001242558	56406	Mm.27592	NM_019825	ENSMUSG00000038369	Ncoa6	AIB3|ASC-2|ASC2|NRC|Ncoa7|PRIP|RAP250|mKIAA0181	nuclear receptor coactivator 6	protein-coding
common_peak2-20000-8-8--0.164702583494742-1.00793137938329	chr1	134362214	134362671	+	0	NA	3' UTR (NM_172516, exon 13 of 13)	3' UTR (NM_172516, exon 13 of 13)	-11502	NM_172517	213464	Mm.132868	NM_172517	ENSMUSG00000026439	Rbbp5	4933411J24Rik|C330016J05	retinoblastoma binding protein 5	protein-coding
unique_peak1-329-31-12-1.52479895267203-3.2055306048522	chr1	133204515	133205860	+	0	NA	intron (NM_001081011, intron 18 of 22)	L1Md_T|LINE|L1	-29047	NM_019777	56489	Mm.386783	NM_019777	ENSMUSG00000042349	Ikbke	AW558201|IKK-i|IKKepsilon|Ikki	inhibitor of kappaB kinase epsilon	protein-coding
common_peak2-30359-14-19--0.422711934529718-0.403453972741636	chr7	28277659	28278204	+	0	NA	Intergenic	MIR3|SINE|MIR	5959	NM_018820	55942	Mm.153684	NM_018820	ENSMUSG00000008384	Sertad1	1110032C13Rik|AV000455|AW456625|Sei-1|Sei1|TRIP-Br1	SERTA domain containing 1	protein-coding
common_peak2-28674-129-285--0.481351014812319-3.14997527589831	chr5	32134885	32137977	+	0	NA	intron (NM_181281, intron 5 of 10)	B1_Mus1|SINE|Alu	136008	NM_181282	107976	Mm.482126	NM_144541	ENSMUSG00000052139	Bre	6030405P19Rik|AI429776|B830038C02Rik	brain and reproductive organ-expressed protein	protein-coding
common_peak1-10775-34-21-0.922636908363969-1.85054049304327	chr14	73253657	73254850	+	0	NA	Intergenic	Intergenic	-144443	NM_207636	319448	Mm.205421	NM_207636	ENSMUSG00000033487	Fndc3a	1700094E19Rik|D14Ertd453e|F730017H24Rik|Fndc3|sys	fibronectin type III domain containing 3A	protein-coding
unique_peak2-34956-6-6--0.241956811677302-0.947717972411649	chr15	93595292	93595744	+	0	NA	Intergenic	Intergenic	162024	NR_045737	77248	Mm.410768	NR_045737		9430014N10Rik	-	RIKEN cDNA 9430014N10 gene	ncRNA
common_peak2-29698-20-8-1.31814978314888-1.77631109801764	chr6	82871689	82872225	+	0	NA	intron (NM_011350, intron 5 of 13)	intron (NM_011350, intron 5 of 13)	17787	NM_011350	20355	Mm.270543	NM_011350	ENSMUSG00000000627	Sema4f	-	sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	protein-coding
unique_peak2-34973-1-7--2.62705701021674-1.80617997398389	chr15	98562310	98562767	+	0	NA	Intergenic	Intergenic	-3909	NM_024169	66120	Mm.30729	NM_024169	ENSMUSG00000003355	Fkbp11	1110002O23Rik|FKBP-11	FK506 binding protein 11	protein-coding
unique_peak2-36485-5-7--0.704380336005853-1.01466476204226	chr2	151968145	151968483	+	0	NA	Intergenic	(CAAA)n|Simple_repeat|Simple_repeat	-1031	NM_009328	21407	Mm.3881	NM_009328	ENSMUSG00000068079	Tcf15	Meso1|bHLH-EC2	transcription factor 15	protein-coding
unique_peak1-6951-13-5-1.19350952991661-1.95509489018123	chr8	111596962	111597614	+	0	NA	Intergenic	Intergenic	136528	NR_037295	100526511		NR_037295		Mir3108	mmu-mir-3108	microRNA 3108	ncRNA
unique_peak1-5009-11-4-1.18676548936425-1.68134727924692	chr4	121024068	121024685	+	0	NA	Intergenic	L1Md_A|LINE|L1	-26854	NM_001033791	545677	Mm.372731	NM_001033791	ENSMUSG00000073764	Gm12888	OTTMUSG00000008911	predicted gene 12888	protein-coding
common_peak1-15337-11-22--1.0148683718054-1.11267835143409	chr4	48124833	48125499	+	0	NA	Intergenic	Intergenic	-12625	NM_026343	67727	Mm.171334	NM_026343	ENSMUSG00000061455	Stx17	4833418L03Rik|6330411F21Rik|9030425C21Rik|AW048351	syntaxin 17	protein-coding
common_peak2-21469-103-174--0.163213365972289-0.514334949543366	chr11	87461906	87462508	+	0	NA	intron (NM_001045527, intron 5 of 5)	MTC|LTR|MaLR	-14382	NM_172448	207742	Mm.440230	NM_172448	ENSMUSG00000034177	Rnf43	4732452J19Rik	ring finger protein 43	protein-coding
common_peak2-20498-60-114--0.491198189323844-1.44060810775761	chr10	58446747	58447664	+	0	NA	intron (NM_172788, intron 2 of 9)	RMER5|LTR|ERV1	171098	NM_172788	237353	Mm.333078	NM_172788	ENSMUSG00000037990	Sh3rf3	4831416G18Rik|Igfbp5-ip|Sh3md4|Sh3rf31	SH3 domain containing ring finger 3	protein-coding
unique_peak1-6057-11-4-1.18676548936425-1.68134727924692	chr6	115901357	115901749	+	0	NA	Intergenic	Intergenic	6596	NM_138311	171506	Mm.21899	NM_138311	ENSMUSG00000042279	H1foo	C86609|H1fo|H1oo	H1 histone family, member O, oocyte-specific	protein-coding
common_peak2-29379-45-93--0.694230826332766-2.0787781418229	chr6	28260724	28262500	+	0	NA	Intergenic	Intergenic	-50011	NM_001081678	627049	Mm.84441	NM_001081678	ENSMUSG00000039841	Zfp800	AA407452|Znf800	zinc finger protein 800	protein-coding
unique_peak2-37827-6-11--1.01956439034085-1.32595962126035	chr5	130089360	130090040	+	0	NA	promoter-TSS (NM_011846)	promoter-TSS (NM_011846)	-389	NM_011846	23948	Mm.42047	NM_011846	ENSMUSG00000029436	Mmp17	MT4-MMP|MT4MMP|MTMMP4	matrix metallopeptidase 17	protein-coding
common_peak2-29574-18-25--0.38752056691274-0.421916810733234	chr6	47835735	47836627	+	0	NA	intron (NM_146175, intron 2 of 7)	MLT1F1|LTR|MaLR	8627	NM_146175	101095	Mm.440186	NM_146175	ENSMUSG00000025821	Zfp282	AI449432|C81429|E430019K09Rik|HUB1	zinc finger protein 282	protein-coding
unique_peak1-5933-17-3-2.21829633820504-3.11807310444576	chr6	89463278	89464035	+	0	NA	intron (NM_025351, intron 4 of 7)	intron (NM_025351, intron 4 of 7)	81990	NM_025351	66098	Mm.20313	NM_025351	ENSMUSG00000030086	Chchd6	0710001P09Rik|1700021B03Rik	coiled-coil-helix-coiled-coil-helix domain containing 6	protein-coding
common_peak1-14107-12-6-0.841421063030034-1.58711810488664	chr2	126947533	126948140	+	0	NA	exon (NM_144818, exon 8 of 18)	exon (NM_144818, exon 8 of 18)	11854	NM_144818	215387	Mm.29786	NM_144818	ENSMUSG00000034906	Ncaph	A730011O11Rik|Brrn1|HCAP-H|mKIAA0074	non-SMC condensin I complex, subunit H	protein-coding
common_peak2-20618-14-37--1.34871135308594-2.38724857749547	chr10	80148841	80149445	+	0	NA	3' UTR (NM_172457, exon 4 of 4)	3' UTR (NM_172457, exon 4 of 4)	-14422	NM_021462	17347	Mm.42126	NM_021462	ENSMUSG00000020190	Mknk2	2010016G11Rik|Gprk7|Mnk2	MAP kinase-interacting serine/threonine kinase 2	protein-coding
common_peak1-18594-13-18--0.469455482805817-0.409888142029227	chr8	106615659	106616471	+	0	NA	Intergenic	Intergenic	-9460	NM_009868	12562	Mm.21767	NM_009868	ENSMUSG00000031871	Cdh5	7B4|AA408225|Cd144|VE-Cad|VECD|VEcad|Vec	cadherin 5	protein-coding
unique_peak2-39283-3-17--2.58390809140159-2.65002542325363	chr8	122294042	122294841	+	0	NA	intron (NM_028883, intron 4 of 7)	intron (NM_028883, intron 4 of 7)	7875	NM_028883	74347	Mm.358759	NM_028883	ENSMUSG00000034105	Tldc1	4632415K11Rik|Kiaa1609	TBC/LysM associated domain containing 1	protein-coding
common_peak2-28997-37-48--0.0887167726293896-0.31027100108714	chr5	108268436	108269555	+	0	NA	intron (NM_007964, intron 2 of 17)	B3|SINE|B2	9814	NM_001276397	73318	Mm.441500	NM_028502		Ube2d2b	1700013N18Rik	ubiquitin-conjugating enzyme E2D 2B	protein-coding
unique_peak1-2762-6-1-1.5653981103803-1.56314192529759	chr17	5295623	5296134	+	0	NA	intron (NM_001085355, intron 8 of 19)	intron (NM_001085355, intron 8 of 19)	122889	NM_175349	106557	Mm.432764	NM_175349		Ldhal6b	4933402O15Rik|AI326310|LDHL|Ldhal	lactate dehydrogenase A-like 6B	protein-coding
common_peak1-11699-13-6-0.971117108580164-1.01572999746118	chr16	31498377	31499031	+	0	NA	Intergenic	ORR1B2|LTR|MaLR	69865	NM_001122683	71911	Mm.293470	NM_175177	ENSMUSG00000046598	Bdh1	2310032J20Rik|AI327223|Bdh	3-hydroxybutyrate dehydrogenase, type 1	protein-coding
unique_peak2-35206-6-6--0.241956811677302-0.947717972411649	chr16	84783113	84783549	+	0	NA	intron (NM_023844, intron 1 of 9)	B1F1|SINE|Alu	8963	NM_023844	67374	Mm.41758	NM_023844	ENSMUSG00000053062	Jam2	1110002N23Rik|2410030G21Rik|2410167M24Rik|JAM-2|JAM-B|Jcam2|VE-JAM	junction adhesion molecule 2	protein-coding
common_peak2-26340-13-8-0.608547029195456-0.660903317613904	chr2	35342114	35342533	+	0	NA	Intergenic	Intergenic	-25378	NM_001145821	14594	Mm.281124	NM_010283	ENSMUSG00000035778	Ggta1	AW108479|GALT|Gal|Ggta|Ggta-1|alpha3GalT	glycoprotein galactosyltransferase alpha 1, 3	protein-coding
unique_peak2-33597-1-6--2.43441193227435-1.56314192529759	chr11	88894604	88894904	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	27308	NM_019505	56077	Mm.153695	NM_019505	ENSMUSG00000000276	Dgke	C87606|DAGK6|DGK	diacylglycerol kinase, epsilon	protein-coding
common_peak2-26090-22-16-0.559821263837065-0.733541631673787	chr2	158121612	158122362	+	0	NA	Intergenic	Intergenic	-10242	NM_008489	16803	Mm.218846	NM_008489	ENSMUSG00000016024	Lbp	Bpifd2|Ly88	lipopolysaccharide binding protein	protein-coding
common_peak1-9979-38-44-0.0795995629688555-0.338806640379593	chr13	93191466	93192527	+	0	NA	Intergenic	Intergenic	-3928	NM_175455	218440	Mm.213623	NM_175455	ENSMUSG00000045034	Ankrd34b	6430502M16Rik|DP58	ankyrin repeat domain 34B	protein-coding
common_peak1-7544-12-7-0.648775985087639-0.697979855752659	chr1	36473516	36474158	+	0	NA	intron (NM_001277076, intron 42 of 52)	intron (NM_001277076, intron 42 of 52)	28247	NM_001013374	214895	Mm.287854	NM_001013374	ENSMUSG00000001143	Lman2l	A630028F14Rik|VIP36-like|VIPL	lectin, mannose-binding 2-like	protein-coding
unique_peak1-4366-7-1-1.79909083029819-1.80617997398389	chr2	156990798	156991293	+	0	NA	intron (NM_011249, intron 16 of 21)	intron (NM_011249, intron 16 of 21)	-30087	NM_018851	56045	Mm.248478	NM_018851	ENSMUSG00000027639	Samhd1	E330031J07Rik|Mg11	SAM domain and HD domain, 1	protein-coding
common_peak2-29271-42-33-0.654866486616845-1.41268768702114	chr5	142813406	142814750	+	0	NA	Intergenic	Intergenic	-63373	NM_199068	17425	Mm.24214	NM_010812	ENSMUSG00000056493	Foxk1	A630048H08Rik|AI463295|ENSMUSG00000075577|Gm10868|Mnf	forkhead box K1	protein-coding
unique_peak1-3905-16-2-2.53330114154691-3.78760380288747	chr2	24300034	24300816	+	0	NA	intron (NM_011040, intron 2 of 11)	intron (NM_011040, intron 2 of 11)	30694	NM_011040	18510	Mm.2533	NM_011040	ENSMUSG00000026976	Pax8	Pax-8	paired box 8	protein-coding
unique_peak2-36860-4-6--0.830815435910851-0.989110657569874	chr3	90248772	90249173	+	0	NA	Intergenic	PB1D10|SINE|Alu	-11414	NM_178876	229543	Mm.268564	NM_145540	ENSMUSG00000027933	Ints3	C77668	integrator complex subunit 3	protein-coding
common_peak1-15280-9-10--0.269818212233077-1.05503135781948	chr4	40278791	40279293	+	0	NA	Intergenic	L1Md_F2|LINE|L1	18777	NR_040663	75819	Mm.399244	NR_040663	ENSMUSG00000087137	4930509K18Rik	-	RIKEN cDNA 4930509K18 gene	ncRNA
common_peak2-32158-4-9--1.34538860874061-1.36011389749466	chr9	108991322	108991656	+	0	NA	intron (NM_025689, intron 1 of 3)	B1F1|SINE|Alu	-6461	NM_172775	235611	Mm.53862	NM_172775	ENSMUSG00000053646	Plxnb1	2900002G15Rik|AU042020|mKIAA0407	plexin B1	protein-coding
common_peak2-30582-21-22-0.0459273092092225-0.319918318021793	chr7	80370703	80371561	+	0	NA	Intergenic	RMER1B|Other|Other	-84134	NR_105062	100505025	Mm.445959	NR_105062		LOC100505025	-	uncharacterized LOC100505025	ncRNA
common_peak2-29405-11-7-0.508693584251613-1.21681515183528	chr6	115523490	115523981	+	0	NA	intron (NM_199033, intron 8 of 11)	(TATG)n|Simple_repeat|Simple_repeat	18859	NM_001101431	70291	Mm.133694	NM_001101431		Mkrn2os	2510049J12Rik	makorin, ring finger protein 2, opposite strand	protein-coding
common_peak1-19095-9-2-1.60465090568306-1.87199725847353	chr9	71694984	71695479	+	0	NA	intron (NM_001253862, intron 19 of 19)	B1_Mur4|SINE|Alu	48672	NM_001253864	21406	Mm.171615	NM_011544	ENSMUSG00000032228	Tcf12	A130037E08Rik|ALF1|HEB|HEBAlt|HTF-4|HTF4|ME1|REB|bHLHb20	transcription factor 12	protein-coding
common_peak1-14896-28-79--1.2689689750659-4.52747119888473	chr3	96245587	96246631	+	0	NA	intron (NM_001256180, intron 1 of 4)	intron (NM_001256180, intron 1 of 4)	10120	NM_001256181	329716	Mm.275223	NM_183223	ENSMUSG00000046317	BC107364	D730018G16	cDNA sequence BC107364	protein-coding
unique_peak2-39642-9-15--0.81038659359578-0.630231561310125	chr9	104001884	104002551	+	0	NA	intron (NM_145700, intron 2 of 2)	intron (NM_145700, intron 2 of 2)	26756	NM_145700	252837	Mm.269254	NM_145700	ENSMUSG00000079355	Ackr4	A630091E18Rik|CCBP2|CCR11|CCX-CKR|CCX-CKR1|Ccrl1|Cmkbrl1|PPR1|VSHK1	atypical chemokine receptor 4	protein-coding
unique_peak2-34648-1-22--4.15061896627376-5.43827864561946	chr14	107074943	107075462	+	0	NA	Intergenic	Intergenic	-189465	NR_045938	73631	Mm.48862	NR_045938		1700128A07Rik	-	RIKEN cDNA 1700128A07 gene	ncRNA
common_peak1-15774-8-9--0.316705676939792-1.03275496310833	chr4	154011336	154011837	+	0	NA	promoter-TSS (NM_001177995)	promoter-TSS (NM_001177995)	-604	NM_027504	70673	Mm.257785	NM_027504	ENSMUSG00000039410	Prdm16	5730557K01Rik|csp1|mel1	PR domain containing 16	protein-coding
common_peak2-24327-12-7-0.648775985087639-0.697979855752659	chr17	84180595	84180993	+	0	NA	intron (NM_001171053, intron 9 of 13)	MTB|LTR|MaLR	65336	NM_025325	107766	Mm.30100	NM_025325	ENSMUSG00000000673	Haao	0610007K21Rik|0610012J07Rik|3-HAO|3-HAOxase|3HAO	3-hydroxyanthranilate 3,4-dioxygenase	protein-coding
unique_peak1-4301-9-2-1.60465090568306-1.87199725847353	chr2	146279054	146279633	+	0	NA	intron (NM_001033348, intron 4 of 40)	B3A|SINE|B2	58397	NM_001033348	241694	Mm.222310	NM_001033348	ENSMUSG00000037110	Ralgapa2	A230067G21Rik|AS250|BC053994|RGC2|pp250	Ral GTPase activating protein, alpha subunit 2 (catalytic)	protein-coding
unique_peak1-7346-11-7-0.508693584251613-1.21681515183528	chrX	9332042	9332682	+	0	NA	Intergenic	RSINE1|SINE|B4	-91711	NM_026096	67334	Mm.46146	NM_026096	ENSMUSG00000040456	Hypm	1700054O13Rik|H2al3	huntingtin interacting protein M	protein-coding
unique_peak2-38994-10-7-0.356415345008769-1.12966497611638	chr8	45626167	45626574	+	0	NA	Intergenic	Intergenic	-409192	NM_001081286	14107	Mm.27365	NM_001081286	ENSMUSG00000070047	Fat1	2310038E12Rik|AU023433|Fath|mFat1	FAT tumor suppressor homolog 1 (Drosophila)	protein-coding
unique_peak1-1970-16-2-2.53330114154691-3.78760380288747	chr14	118750126	118751060	+	0	NA	Intergenic	Lx6|LINE|L1	-14507	NR_045624	73306	Mm.362328	NR_045624		1700044C05Rik	-	RIKEN cDNA 1700044C05 gene	ncRNA
unique_peak2-33343-3-5--0.998945590680433-0.96108193396963	chr11	23067954	23068332	+	0	NA	Intergenic	Intergenic	-87898	NM_001035226	103573	Mm.217547	NM_134014	ENSMUSG00000020290	Xpo1	AA420417|Crm1|Exp1	exportin 1, CRM1 homolog (yeast)	protein-coding
common_peak2-27195-31-11-1.64027617009197-3.52967372072617	chr3	37747687	37748154	+	0	NA	Intergenic	L1M3|LINE|L1	-49815	NR_040559	626410	Mm.389417	NR_040559		Gm20755	-	predicted gene, 20755	ncRNA
common_peak2-26303-11-13--0.298661337805991-0.337263207250336	chr2	32436109	32436712	+	0	NA	intron (NM_198191, intron 9 of 9)	intron (NM_198191, intron 9 of 9)	5071	NM_198191	227733	Mm.78923	NM_198191	ENSMUSG00000046854	Pip5kl1	BC028795	phosphatidylinositol-4-phosphate 5-kinase-like 1	protein-coding
common_peak1-7616-13-10-0.319040412000471-0.446472590016315	chr1	60179859	60180391	+	0	NA	intron (NM_001285463, intron 5 of 17)	L1_Mur3|LINE|L1	15198	NR_104344	241066	Mm.276441	NM_139150	ENSMUSG00000026017	Carf	Als2cr8|ECBRC-FC1|ECBRC-FC2	calcium response factor	protein-coding
common_peak2-21030-39-72--0.574063311960864-1.25617732716374	chr11	32454990	32456219	+	0	NA	intron (NM_009288, intron 2 of 18)	intron (NM_009288, intron 2 of 18)	22338	NM_009288	20868	Mm.8235	NM_009288	ENSMUSG00000020272	Stk10	Gek1|Lok|mKIAA4026	serine/threonine kinase 10	protein-coding
common_peak1-10122-51-70--0.0748232939021092-0.315296283155016	chr13	31558316	31560203	+	0	NA	Intergenic	Intergenic	-90780	NM_008239	15220	Mm.44235	NM_008239	ENSMUSG00000038415	Foxq1	HFH-1|Hfh1|Hfh1l|sa	forkhead box Q1	protein-coding
common_peak1-13203-26-27-0.120544170100858-0.335332249061431	chr19	21945710	21946789	+	0	NA	Intergenic	Intergenic	93419	NM_031997	83921	Mm.329776	NM_031997	ENSMUSG00000024754	Tmem2	-	transmembrane protein 2	protein-coding
common_peak2-21796-16-16-0.0308008010177225-0.307611222530525	chr11	118290296	118291122	+	0	NA	intron (NM_001204129, intron 1 of 3)	intron (NM_001204129, intron 1 of 3)	938	NM_001204129	56745	Mm.23845	NM_019959		C1qtnf1	1600017K21Rik|CTRP1|Zsig37	C1q and tumor necrosis factor related protein 1	protein-coding
common_peak1-8805-8-24--1.63863377182715-2.11898024768848	chr11	20543281	20543765	+	0	NA	intron (NM_001038625, intron 1 of 1)	intron (NM_001038625, intron 1 of 1)	11543	NM_001038625	58172	Mm.339676	NM_021372	ENSMUSG00000049800	Sertad2	AB041541|AU021878|Kiaa0127|SEI-2|Sei2|TRIP-Br2|mKIAA0127	SERTA domain containing 2	protein-coding
common_peak1-14328-39-41-0.223443824140393-0.455649802789393	chr2	163994851	163996027	+	0	NA	intron (NM_008435, intron 1 of 3)	intron (NM_008435, intron 1 of 3)	1410	NM_008435	16538	Mm.6217	NM_008435	ENSMUSG00000040164	Kcns1	Kv9.1	K+ voltage-gated channel, subfamily S, 1	protein-coding
unique_peak2-39849-1-6--2.43441193227435-1.56314192529759	chrX	68821014	68821400	+	0	NA	Intergenic	L1ME3B|LINE|L1	12115	NM_001293625	15354	Mm.336087	NM_008253	ENSMUSG00000015217	Hmgb3	Hmg2a|Hmg4	high mobility group box 3	protein-coding
unique_peak2-34937-12-29--1.25811461052088-1.65862513589797	chr15	87597227	87598158	+	0	NA	Intergenic	L1MEf|LINE|L1	28681	NR_105817	102465209		NR_105817	miRBase:MI0021927	Mir6393	mmu-mir-6393	microRNA mir-6393	ncRNA
common_peak2-25727-23-18-0.473839991065495-0.618644178587689	chr19	24055075	24055787	+	0	NA	intron (NM_001114174, intron 6 of 10)	intron (NM_001114174, intron 6 of 10)	50078	NM_001114174	381217	Mm.426078	NM_001114174	ENSMUSG00000071604	Fam189a2	AI414343|AI666772|Gm967	family with sequence similarity 189, member A2	protein-coding
common_peak1-16253-12-15--0.351224014912361-0.332077462497413	chr5	105519645	105520124	+	0	NA	intron (NM_172777, intron 5 of 10)	L1Md_T|LINE|L1	19427	NM_172777	236573	Mm.425261	NM_172777	ENSMUSG00000029298	Gbp9	-	guanylate-binding protein 9	protein-coding
unique_peak2-39886-3-7--1.41398308995928-1.23214870625617	chrX	75232803	75233050	+	0	NA	promoter-TSS (NM_027768)	promoter-TSS (NM_027768)	-704	NM_027768	71351	Mm.34695	NM_027768	ENSMUSG00000044121	5430402E10Rik	-	RIKEN cDNA 5430402E10 gene	protein-coding
unique_peak1-3388-8-8--0.164702583494742-1.00793137938329	chr19	4063307	4063795	+	0	NA	Intergenic	MMVL30-int|LTR|ERV1	-4257	NM_144869	225884	Mm.440201	NM_144869	ENSMUSG00000058216	BC021614	-	cDNA sequence BC021614	protein-coding
common_peak2-32202-9-12--0.510826311736872-0.394412252720706	chr9	120011270	120011750	+	0	NA	Intergenic	RLTR10E|LTR|ERVK	-8007	NM_144793	208638	Mm.236656	NM_144793	ENSMUSG00000032519	Slc25a38	AV019094|BC010801	solute carrier family 25, member 38	protein-coding
common_peak2-31773-8-8--0.164702583494742-1.00793137938329	chr9	22259583	22259951	+	0	NA	intron (NM_018739, intron 3 of 5)	intron (NM_018739, intron 3 of 5)	13033	NM_018739	55934	Mm.38235	NM_018739	ENSMUSG00000032239	Rp9	PAP-1|Rp9h	retinitis pigmentosa 9 (human)	protein-coding
common_peak2-22415-7-13--1.00826409175941-0.697979855752659	chr13	35991271	35991543	+	0	NA	intron (NM_145938, intron 5 of 7)	intron (NM_145938, intron 5 of 7)	6809	NM_145938	208366	Mm.35545	NM_145938		Rpp40	D8Bwg1265e|Rnasep1	ribonuclease P 40 subunit	protein-coding
common_peak2-24874-26-41--0.464418330620298-0.672592695851323	chr17	81064430	81065294	+	0	NA	intron (NM_001290345, intron 2 of 33)	intron (NM_001290345, intron 2 of 33)	62503	NM_001290345	225028	Mm.311948	NM_001081357	ENSMUSG00000024242	Map4k3	4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1	mitogen-activated protein kinase kinase kinase kinase 3	protein-coding
unique_peak1-2796-8-3-1.00522241794757-1.39487600375387	chr17	13867072	13867573	+	0	NA	intron (NM_022311, intron 1 of 2)	intron (NM_022311, intron 1 of 2)	-30226	NM_010806	17356	Mm.59167	NM_010806	ENSMUSG00000068036	Mllt4	5033403D15Rik|AF6|Af-6|Afadin|Gm314|I-afadin|S-afadin	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 4	protein-coding
common_peak1-13836-9-21--1.26981821223308-1.37307999835977	chr2	59611994	59612462	+	0	NA	intron (NM_001290659, intron 6 of 25)	intron (NM_001290659, intron 6 of 25)	108435	NM_001159636	72137	Mm.288734	NM_028118	ENSMUSG00000026988	Wdsub1	1700048E19Rik|2610014F08Rik	WD repeat, SAM and U-box domain containing 1	protein-coding
unique_peak2-39709-1-6--2.43441193227435-1.56314192529759	chr9	116252722	116253045	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-168402	NM_009371	21813	Mm.172346	NM_009371	ENSMUSG00000032440	Tgfbr2	1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII	transforming growth factor, beta receptor II	protein-coding
unique_peak2-36893-7-13--1.00826409175941-0.697979855752659	chr3	95734381	95734950	+	0	NA	intron (NM_001253758, intron 1 of 4)	intron (NM_001253758, intron 1 of 4)	1485	NM_023210	66471	Mm.218657	NM_023210	ENSMUSG00000015749	Anp32e	2810018A15Rik|AI047746|AI326868|CPD1|LANP-L|LANPL|mLANP-L	acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	protein-coding
common_peak1-18740-46-45-0.374433987191789-0.767941280947589	chr8	124642480	124644006	+	0	NA	Intergenic	Intergenic	141319	NR_106096	102466915		NR_106096		Mir7237	mmu-mir-7237	microRNA mir-7237	ncRNA
common_peak2-32297-14-43--1.56021545827965-3.36245859328196	chrX	38564534	38565306	+	0	NA	Intergenic	Intergenic	-189558	NM_016886	53623	Mm.327681	NM_016886	ENSMUSG00000001986	Gria3	2900064I19Rik|GluA3|GluR-C|GluR-K3|Glur-3|Glur3|Gluralpha3	glutamate receptor, ionotropic, AMPA3 (alpha 3)	protein-coding
common_peak2-31322-81-149--0.356769087487315-1.1389933161489	chr8	80738434	80740343	+	0	NA	intron (NM_183096, intron 2 of 13)	intron (NM_183096, intron 2 of 13)	2147	NM_183096	73301	Mm.61243	NM_183096	ENSMUSG00000037101	Ttc29	1700031F13Rik	tetratricopeptide repeat domain 29	protein-coding
common_peak2-30063-19-26--0.352200175501782-0.416752705545949	chr6	128760812	128761293	+	0	NA	Intergenic	Intergenic	15281	NM_030599	80782	Mm.6180	NM_030599	ENSMUSG00000079298	Klrb1b	Klrb1d|Ly55b|Ly55d|NKR-P1B|NKR-P1D|Nkrp1-b|Nkrp1d	killer cell lectin-like receptor subfamily B member 1B	protein-coding
common_peak1-14392-10-13--0.450939577048835-0.386243247519795	chr2	170525717	170526193	+	0	NA	Intergenic	Intergenic	-31352	NM_029761	76829	Mm.41633	NM_029761	ENSMUSG00000027560	Dok5	2700055C10Rik	docking protein 5	protein-coding
common_peak2-22135-60-60-0.423554524057645-1.04415539603865	chr12	85473273	85474701	+	0	NA	intron (NM_028821, intron 5 of 7)	URR1B|DNA|MER1_type	15452	NM_027438	70481	Mm.444348	NM_027438	ENSMUSG00000054383	Pnma1	5730402C15Rik	paraneoplastic antigen MA1	protein-coding
common_peak2-28741-11-9-0.186765489364251-0.344532117358383	chr5	36722013	36722491	+	0	NA	intron (NM_030889, intron 1 of 26)	(CA)n|Simple_repeat|Simple_repeat	18536	NM_030889	81840	Mm.34113	NM_030889	ENSMUSG00000029093	Sorcs2	N28137|mKIAA1329	sortilin-related VPS10 domain containing receptor 2	protein-coding
common_peak2-29428-10-10--0.103016273628528-0.301029995663987	chr6	8259321	8259819	+	0	NA	intron (NR_033518, intron 2 of 3)	intron (NR_033518, intron 2 of 3)	50282	NR_033518	100036521	Mm.446106	NR_033518	ENSMUSG00000089862	Gm16039	OTTMUSG00000029336	predicted gene 16039	ncRNA
unique_peak2-38244-3-7--1.41398308995928-1.23214870625617	chr6	122690630	122691097	+	0	NA	intron (NM_011401, intron 1 of 9)	PB1D10|SINE|Alu	1900	NM_011401	20527	Mm.395108	NM_011401	ENSMUSG00000003153	Slc2a3	AA408729|AL023014|AL024341|AU040424|C78366|Glut-3|Glut3	solute carrier family 2 (facilitated glucose transporter), member 3	protein-coding
common_peak2-32356-36-106--1.26214590023339-5.80802513761265	chrX	94724352	94725799	+	0	NA	Intergenic	Intergenic	-152527	NM_001161433	245527	Mm.189270	NM_175540	ENSMUSG00000034457	Eda2r	9430060M22Rik|TNFRSF27|Xedar	ectodysplasin A2 receptor	protein-coding
unique_peak1-5357-9-5-0.604650905683064-1.21398586181642	chr5	92729980	92730492	+	0	NA	intron (NM_172713, intron 8 of 21)	intron (NM_172713, intron 8 of 21)	8814	NM_172713	231452	Mm.86564	NM_172713	ENSMUSG00000029415	Sdad1	4931421J16|AA591032|AW538460	SDA1 domain containing 1	protein-coding
unique_peak1-2022-18-4-1.99099105634099-2.82951996911245	chr15	10720886	10721766	+	0	NA	Intergenic	B1F|SINE|Alu	-37480	NR_040357	100502601	Mm.399434	NR_040357		Gm19276	-	predicted gene, 19276	ncRNA
common_peak1-13429-38-24-0.927596469523806-2.07189913552604	chr19	54982367	54983972	+	0	NA	Intergenic	(TGG)n|Simple_repeat|Simple_repeat	190768	NM_008149	14732	Mm.210196	NM_008149	ENSMUSG00000024978	Gpam	GPAT|GPAT1	glycerol-3-phosphate acyltransferase, mitochondrial	protein-coding
common_peak2-22231-41-51-0.000708986707568471-0.303138254425616	chr13	93191655	93192973	+	0	NA	Intergenic	Intergenic	-3610	NM_175455	218440	Mm.213623	NM_175455	ENSMUSG00000045034	Ankrd34b	6430502M16Rik|DP58	ankyrin repeat domain 34B	protein-coding
unique_peak2-38126-5-11--1.28934283672701-1.477227296591	chr6	83115043	83115582	+	0	NA	promoter-TSS (NM_001198867)	promoter-TSS (NM_001198867)	-606	NM_001198866	13191	Mm.6919	NM_007835	ENSMUSG00000031865	Dctn1	AL022633|Glued|p150|p150<glued>	dynactin 1	protein-coding
unique_peak1-2361-46-1-4.8979959432488-16.4478148185287	chr15	87624089	87625949	+	0	NA	Intergenic	Intergenic	1354	NR_105817	102465209		NR_105817	miRBase:MI0021927	Mir6393	mmu-mir-6393	microRNA mir-6393	ncRNA
unique_peak2-34546-7-10--0.660340788339108-1.12966497611638	chr14	59597533	59598049	+	0	NA	Intergenic	Intergenic	163939	NM_026461	67932	Mm.65550	NM_026461	ENSMUSG00000021977	1700129C05Rik	-	RIKEN cDNA 1700129C05 gene	protein-coding
common_peak1-17186-9-6-0.382258484346616-1.11707584880836	chr6	124477950	124478475	+	0	NA	Intergenic	Intergenic	14127	NM_144938	50908	Mm.219527	NM_144938	ENSMUSG00000038521	C1s1	AA959438|AI255193|AI327365|C1s|C1sa	complement component 1, s subcomponent 1	protein-coding
common_peak2-23693-78-105-0.078900639597336-0.350071751020758	chr15	88733033	88734698	+	0	NA	Intergenic	Intergenic	41241	NM_145478	223775	Mm.400129	NM_145478	ENSMUSG00000035828	Pim3	BC026639|Kid1	proviral integration site 3	protein-coding
common_peak2-20543-15-30--0.942031559831219-1.24110690293937	chr10	67548511	67549166	+	0	NA	Intergenic	AT_rich|Low_complexity|Low_complexity	106492	NM_001081346	170799	Mm.209844	NM_133244	ENSMUSG00000037846	Rtkn2	B130039D23Rik|Mbf|Plekhk1	rhotekin 2	protein-coding
unique_peak1-81-14-4-1.57728806547028-2.4322161449009	chr1	40275813	40276485	+	0	NA	Intergenic	Intergenic	-5776	NM_008362	16177	Mm.896	NM_008362	ENSMUSG00000026072	Il1r1	CD121a|CD121b|IL-iR|Il1r-1	interleukin 1 receptor, type I	protein-coding
common_peak2-30696-8-9--0.316705676939792-1.03275496310833	chr7	111024465	111024913	+	0	NA	Intergenic	Intergenic	6066	NM_013618	18367	Mm.445781	NM_013618	ENSMUSG00000058200	Olfr66	5'[b]1|5'beta1|MOR1-3|ORL532	olfactory receptor 66	protein-coding
common_peak1-9625-9-14--0.717277189204299-0.53895475198017	chr11	121701770	121702358	+	0	NA	intron (NM_029049, intron 3 of 3)	RLTR31_Mm|LTR|ERVK	10532	NM_029049	74675	Mm.61213	NM_029049	ENSMUSG00000039198	Ptchd3	4930451E13Rik|4933440L20Rik|RNDEu-3	patched domain containing 3	protein-coding
common_peak1-11952-13-17--0.391452970804544-0.364171515310935	chr17	5805811	5806615	+	0	NA	Intergenic	Intergenic	6723	NR_045080	78512	Mm.23696	NR_045079	ENSMUSG00000096965	3300005D01Rik	-	RIKEN cDNA 3300005D01 gene	ncRNA
unique_peak2-33527-4-7--1.02346051385325-1.09384600808989	chr11	76478843	76479269	+	0	NA	Intergenic	Intergenic	-6916	NM_177182	320522	Mm.131585	NM_177182	ENSMUSG00000044243	Bhlha9	A830053O21Rik	basic helix-loop-helix family, member a9	protein-coding
common_peak2-27778-4-5--0.608423014574403-0.909929411522249	chr3	133624827	133625060	+	0	NA	Intergenic	RSINE1|SINE|B4	-274516	NM_001004367	319478	Mm.224814	NM_001004367	ENSMUSG00000044365	Cxxc4	9330210J02Rik|C030003J12Rik|Idax	CXXC finger 4	protein-coding
common_peak1-11647-23-45--0.801794451547932-1.41868709588403	chr16	23127617	23128284	+	0	NA	promoter-TSS (NM_145480)	promoter-TSS (NM_145480)	-147	NM_145480	106344	Mm.386835	NM_145480	ENSMUSG00000022881	Rfc4	A1|AI894123|AU040575|RFC37	replication factor C (activator 1) 4	protein-coding
unique_peak2-40009-0-7--3.84013093047421-1.80617997398389	chrY	40029783	40030184	+	0	NA	Intergenic	Intergenic	37642725	NM_001270512	100041505	Mm.491824	NM_001270512		Gm3376	Rbmy1b	predicted gene 3376	protein-coding
common_peak1-19385-10-31--1.64358465499123-2.75133420124051	chrX	38634614	38635134	+	0	NA	Intergenic	RLTR10|LTR|ERVK	-119604	NM_016886	53623	Mm.327681	NM_016886	ENSMUSG00000001986	Gria3	2900064I19Rik|GluA3|GluR-C|GluR-K3|Glur-3|Glur3|Gluralpha3	glutamate receptor, ionotropic, AMPA3 (alpha 3)	protein-coding
unique_peak2-35052-4-8--1.19338551529556-1.21878474469819	chr16	10314105	10314375	+	0	NA	promoter-TSS (NM_007929)	promoter-TSS (NM_007929)	-179	NM_007929	13731	Mm.246009	NM_007929	ENSMUSG00000022505	Emp2	XMP	epithelial membrane protein 2	protein-coding
common_peak2-29150-10-10--0.103016273628528-0.301029995663987	chr5	127632477	127632793	+	0	NA	Intergenic	RLTR15|LTR|ERVK	-18300	NR_045371	75916	Mm.394659	NR_045371		4930572K03Rik	-	RIKEN cDNA 4930572K03 gene	ncRNA
common_peak1-13951-9-8-0.0196884049619079-1.03275496310833	chr2	91184061	91184571	+	0	NA	intron (NM_175123, intron 3 of 8)	intron (NM_175123, intron 3 of 8)	79044	NM_023854	77038	Mm.43636	NM_023854	ENSMUSG00000027255	Arfgap2	2310032E02Rik|Zfp289	ADP-ribosylation factor GTPase activating protein 2	protein-coding
common_peak2-29631-96-108-0.397866889578403-1.42161708034464	chr6	56796650	56798387	+	0	NA	intron (NM_012056, intron 1 of 9)	intron (NM_012056, intron 1 of 9)	15465	NM_012056	27055	Mm.20943	NM_012056	ENSMUSG00000029781	Fkbp9	1810014L23|AW549641|FKBP-63|FKBP-9|FKBP60|FKBP63|FKBP65RS	FK506 binding protein 9	protein-coding
common_peak1-7892-15-8-0.842239749113344-0.891319708951327	chr1	134985414	134985959	+	0	NA	intron (NM_001099276, intron 16 of 32)	B1_Mur1|SINE|Alu	-42057	NM_133819	108954	Mm.293628	NM_133819	ENSMUSG00000046062	Ppp1r15b	1810033K10Rik|AI606441|C530022L24Rik|CReP	protein phosphatase 1, regulatory (inhibitor) subunit 15b	protein-coding
common_peak2-31070-50-89--0.450912779850722-1.0448764443464	chr8	22858673	22860090	+	0	NA	Intergenic	Intergenic	14372	NM_007852	13240	Mm.426552	NM_007852		Defa6	Defcr6	defensin, alpha, 6	protein-coding
common_peak1-11467-18-20--0.0793982715504091-0.301029995663976	chr15	101938779	101939576	+	0	NA	intron (NM_153533, intron 10 of 28)	intron (NM_153533, intron 10 of 28)	5758	NM_153533	209039	Mm.29389	NM_153533	ENSMUSG00000037003	Tenc1	C1-ten|nep|nph	tensin like C1 domain-containing phosphatase	protein-coding
unique_peak2-37151-8-8--0.164702583494742-1.00793137938329	chr4	40721793	40722101	+	0	NA	Intergenic	Intergenic	-17029	NM_021535	74255	Mm.289929	NM_021535		Smu1	2600001O03Rik|2610203K23Rik|AB044414|AI845086|AW556129|Bwd	smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)	protein-coding
common_peak2-30125-18-8-1.14299414978604-1.45476480588849	chr6	137568338	137568816	+	0	NA	intron (NM_007945, intron 1 of 21)	L1Md_T|LINE|L1	29229	NM_001271588	13860	Mm.235346	NM_007945	ENSMUSG00000015766	Eps8	AW261790	epidermal growth factor receptor pathway substrate 8	protein-coding
common_peak2-20085-10-15--0.643584654991231-0.519648556297791	chr1	155158716	155159366	+	0	NA	intron (NM_010683, intron 1 of 27)	(CA)n|Simple_repeat|Simple_repeat	20875	NM_010683	226519	Mm.1249	NM_010683	ENSMUSG00000026478	Lamc1	Lamb2	laminin, gamma 1	protein-coding
common_peak2-26164-96-125-0.188771290855412-0.592685996350274	chr2	18765870	18767879	+	0	NA	intron (NM_008845, intron 9 of 9)	ID|SINE|ID	146225	NM_001001334	381350	Mm.330024	NM_001001334		BC061194	-	cDNA sequence BC061194	protein-coding
unique_peak1-2059-11-2-1.92373108353046-2.32232533660526	chr15	27548013	27548735	+	0	NA	intron (NM_001013792, intron 3 of 6)	B3|SINE|B2	12074	NM_001013792	432940	Mm.309164	NM_001013792	ENSMUSG00000046034	Otulin	C79097|Fam105b|m3Sapc|m7-1Sapc	OTU deubiquitinase with linear linkage specificity	protein-coding
unique_peak2-38984-5-6--0.511735258063458-0.947717972411649	chr8	41037961	41038379	+	0	NA	Intergenic	Intergenic	-310138	NM_001113326	20288	Mm.239291	NM_031195	ENSMUSG00000025044	Msr1	MRS-A|MSR|MSR-A|SR-AI|SR-AII|Scara1|Scvr	macrophage scavenger receptor 1	protein-coding
common_peak2-28792-20-11-0.903112283870037-1.11267835143409	chr5	64327203	64327736	+	0	NA	intron (NM_145923, intron 2 of 6)	intron (NM_145923, intron 2 of 6)	32667	NM_145923	100532	Mm.243632	NM_145923	ENSMUSG00000047881	Rell1	AA536743	RELT-like 1	protein-coding
common_peak2-28890-11-23--1.07626891646954-1.24082643394777	chr5	88886552	88887549	+	0	NA	intron (NM_009664, intron 2 of 10)	intron (NM_009664, intron 2 of 10)	2014	NM_009664	11698	Mm.8437	NM_009664	ENSMUSG00000029288	Ambn	-	ameloblastin	protein-coding
common_peak2-23331-47-51-0.234401706625456-0.495169887621104	chr15	37960257	37961315	+	0	NA	intron (NM_001081359, intron 9 of 58)	intron (NM_001081359, intron 9 of 58)	47823	NM_001112721	70790	Mm.476840	NM_027553	ENSMUSG00000037487	Ubr5	Edd|Edd1	ubiquitin protein ligase E3 component n-recognin 5	protein-coding
common_peak1-14635-10-6-0.549060422951165-1.21398586181642	chr3	56631878	56632423	+	0	NA	Intergenic	Intergenic	473691	NM_008536	17112	Mm.856	NM_008536	ENSMUSG00000027800	Tm4sf1	L6|M3s1	transmembrane 4 superfamily member 1	protein-coding
common_peak2-25187-13-6-0.971117108580164-1.01572999746118	chr18	57745013	57745452	+	0	NA	intron (NM_029290, intron 3 of 6)	intron (NM_029290, intron 3 of 6)	-33181	NR_015494	75084	Mm.243841	NR_015494	ENSMUSG00000086607	4930511M06Rik	-	RIKEN cDNA 4930511M06 gene	ncRNA
common_peak1-14545-61-115--0.475231665378232-1.42899477322861	chr3	32396900	32398082	+	0	NA	Intergenic	Intergenic	-6600	NM_001195074	100502876	Mm.383358	NM_001195074	ENSMUSG00000091091	Kcnmb3	EG435726|Gm5707	potassium large conductance calcium-activated channel, subfamily M, beta member 3	protein-coding
common_peak1-15900-18-59--1.59397144438017-4.67072804133976	chr5	20701904	20702767	+	0	NA	intron (NM_175437, intron 3 of 30)	L1_Mus3|LINE|L1	10250	NM_175437	212167	Mm.121705	NM_175437	ENSMUSG00000039934	Gsap	A530088I07Rik|Pion	gamma-secretase activating protein	protein-coding
unique_peak1-6802-9-3-1.18961340640422-1.57096726280955	chr8	70833685	70834233	+	0	NA	intron (NM_028182, intron 4 of 8)	intron (NM_028182, intron 4 of 8)	33532	NM_028182	72281	Mm.40974	NM_028182	ENSMUSG00000053886	Sh2d4a	2210402M20Rik|SH2A	SH2 domain containing 4A	protein-coding
unique_peak1-5792-9-1-2.18961340640422-2.31132995230379	chr6	59409308	59409881	+	0	NA	Intergenic	RLTR13C1|LTR|ERVK	-33310	NM_183183	243385	Mm.138080	NM_183183	ENSMUSG00000045441	Gprin3	C030038J10Rik|C730021L23	GPRIN family member 3	protein-coding
common_peak2-25161-8-15--0.994777582052429-0.771068449301683	chr18	50128062	50128747	+	0	NA	Intergenic	Intergenic	-10677	NM_001177760	106869	Mm.27740	NM_134131	ENSMUSG00000062210	Tnfaip8	AA987150|E130304C20Rik|ENSMUSG00000073567|Gg2-1|Gm10539|Nded|Ssc-2	tumor necrosis factor, alpha-induced protein 8	protein-coding
unique_peak2-34616-0-6--3.64748585253182-1.56314192529759	chr14	75777648	75778084	+	0	NA	Intergenic	RMER2|LTR|ERV1	-77923	NM_001128093	380918	Mm.484360	NM_001128093	ENSMUSG00000091722	Siah3	Gm912	seven in absentia homolog 3 (Drosophila)	protein-coding
common_peak1-7910-60-39-1.03236376673317-3.69288523221345	chr1	136228526	136230890	+	0	NA	promoter-TSS (NM_001144855)	promoter-TSS (NM_001144855)	-203	NM_001144855	68507	Mm.295105	NM_001144855	ENSMUSG00000026458	Ppfia4	1110008G13Rik|AI448359|AI852265|C81506	protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4	protein-coding
common_peak1-11248-27-27-0.184191028837632-0.393151991482004	chr15	80053590	80054626	+	0	NA	Intergenic	MTC|LTR|MaLR	-10402	NM_178719	239555	Mm.307163	NM_178719	ENSMUSG00000022412	Mief1	A230016E22|AI452372|Smcr7l	mitochondrial elongation factor 1	protein-coding
common_peak1-13066-24-10-1.33377828413042-2.22881803703862	chr19	6263886	6264858	+	0	NA	promoter-TSS (NR_029720)	promoter-TSS (NR_029720)	-271	NR_029830	723957		NR_029830	miRBase:MI0000733	Mir194-2	Mirn194-2	microRNA 194-2	ncRNA
unique_peak2-34437-3-9--1.73591118484664-1.57096726280955	chr14	21082901	21083465	+	0	NA	intron (NM_029006, intron 3 of 4)	intron (NM_029006, intron 3 of 4)	5201	NM_029006	74571	Mm.105571	NM_029006	ENSMUSG00000023387	Kcnk16	4731413G05Rik|TALK-1|TALK1	potassium channel, subfamily K, member 16	protein-coding
common_peak1-18855-11-13--0.298661337805991-0.337263207250336	chr9	21002892	21003440	+	0	NA	intron (NM_019798, intron 2 of 9)	intron (NM_019798, intron 2 of 9)	2017	NM_019798	18577	Mm.191749	NM_019798	ENSMUSG00000032177	Pde4a	D9Ertd60e|Dpde2	phosphodiesterase 4A, cAMP specific	protein-coding
common_peak2-24245-25-22-0.338287949288093-0.51032171069054	chr16	91372533	91373436	+	0	NA	promoter-TSS (NM_010509)	promoter-TSS (NM_010509)	-44	NM_010509	15976	Mm.6834	NM_010509	ENSMUSG00000022971	Ifnar2	AI747302|Ifnar-2	interferon (alpha and beta) receptor 2	protein-coding
common_peak1-15186-20-23--0.0968877161299631-0.305855887145851	chr3	152589279	152590284	+	0	NA	intron (NM_012028, intron 2 of 4)	intron (NM_012028, intron 2 of 4)	55390	NM_012028	26938	Mm.40915	NM_012028		St6galnac5	AI851940|Siat7e	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	protein-coding
unique_peak2-39008-2-9--2.23938235115068-1.87199725847353	chr8	47722052	47722401	+	0	NA	intron (NM_009810, intron 6 of 6)	(CA)n|Simple_repeat|Simple_repeat	19581	NM_009810	12367	Mm.34405	NM_009810		Casp3	A830040C14Rik|AC-3|Apopain|CASP-3|CC3|CPP-32|CPP32|Caspase-3|Lice|SCA-1|Yama|mldy	caspase 3	protein-coding
common_peak1-9508-43-71--0.387361815918609-0.743411445750435	chr11	113750627	113752672	+	0	NA	intron (NM_172800, intron 4 of 44)	intron (NM_172800, intron 4 of 44)	-138520	NM_001163346	56699	Mm.293378	NM_020006	ENSMUSG00000041598	Cdc42ep4	1500041M20Rik|Borg4|CEP4	CDC42 effector protein (Rho GTPase binding) 4	protein-coding
common_peak2-27602-37-51--0.174446646655273-0.357020589591567	chr3	103255653	103256891	+	0	NA	Intergenic	Intergenic	-122933	NM_001276679	54524	Mm.88818	NM_018800	ENSMUSG00000027849	Syt6	3110037A08Rik|AW048930|sytVI	synaptotagmin VI	protein-coding
common_peak1-18001-21-30--0.384707045120639-0.446094173747089	chr7	139389043	139389915	+	0	NA	Intergenic	Intergenic	-43055	NM_018867	55987	Mm.471654	NM_018867	ENSMUSG00000030862	Cpxm2	4632435C11Rik|CPX-2|Cpx2	carboxypeptidase X 2 (M14 family)	protein-coding
common_peak2-29104-58-96--0.303962907296631-0.66019930050255	chr5	122706862	122708455	+	0	NA	intron (NM_001039153, intron 3 of 13)	intron (NM_001039153, intron 3 of 13)	6811	NR_104441	654470	Mm.28804	NM_001039153	ENSMUSG00000038593	Tctn1	G730031O11Rik|Tect1	tectonic family member 1	protein-coding
unique_peak1-5468-12-4-1.32684789020028-2.04196296489515	chr5	124861740	124862297	+	0	NA	intron (NM_001081203, intron 3 of 31)	B2_Mm2|SINE|B2	13905	NM_001081203	243272	Mm.23879	NM_001081203	ENSMUSG00000038095	Sbno1	9330180L10Rik|AI849128|AW557836|BC021875|Sbno|mSno1|sno	sno, strawberry notch homolog 1 (Drosophila)	protein-coding
common_peak2-21118-11-12--0.191746133889479-0.310474156842889	chr11	53308509	53309127	+	0	NA	Intergenic	Intergenic	-15121	NM_183173	237761	Mm.145208	NM_183173	ENSMUSG00000044352	Sowaha	A830006N08Rik|Ankrd43	sosondowah ankyrin repeat domain family member A	protein-coding
common_peak1-12729-31-32-0.18084455145467-0.379775532323848	chr18	53743832	53744720	+	0	NA	Intergenic	Intergenic	-63529	NR_040349	100502945	Mm.376937	NR_040349		Gm19466	-	predicted gene, 19466	ncRNA
common_peak2-30835-19-14-0.495796731053168-0.607095980551316	chr7	132346547	132347067	+	0	NA	Intergenic	MT2A|LTR|ERVL	146493	NR_045804	71208	Mm.159465	NM_172408		4933440M02Rik	-	RIKEN cDNA 4933440M02 gene	ncRNA
common_peak2-23651-5-15--1.70438033600585-1.4372489031793	chr15	84719877	84720464	+	0	NA	Intergenic	Intergenic	-33611	NR_030731	271305	Mm.101022	NM_001081166	ENSMUSG00000016624	Phf21b	A730032D07Rik	PHD finger protein 21B	protein-coding
common_peak1-10729-76-71-0.592019384420969-2.05620933116779	chr14	64439864	64443067	+	0	NA	Intergenic	Intergenic	-37684	NM_028228	72400	Mm.379214	NM_028228	ENSMUSG00000021958	Pinx1	2210403I16Rik|2610028A01Rik|67-11-3|AU024023|LPTS|LPTS1	PIN2/TERF1 interacting, telomerase inhibitor 1	protein-coding
common_peak1-13184-28-52--0.674961334741736-1.23110482636734	chr19	17394012	17394827	+	0	NA	Intergenic	ORR1E|LTR|MaLR	19576	NM_001136484	14537	Mm.244825	NM_010265	ENSMUSG00000038843	Gcnt1	5630400D21Rik|B130048E03|C2 GlcNAcT|C2GNT|IGnT	glucosaminyl (N-acetyl) transferase 1, core 2	protein-coding
common_peak1-17721-36-31-0.479321086167754-0.864252281539331	chr7	79934752	79936420	+	0	NA	Intergenic	MTE2b|LTR|MaLR	311368	NR_046024	625243	Mm.261798	NR_046024		Gm6567	-	predicted gene 6567	ncRNA
common_peak2-29634-15-12-0.311725032414564-0.425539671739611	chr6	56923992	56924667	+	0	NA	Intergenic	Intergenic	-11007	NM_134174	171192	Mm.377172	NM_134174	ENSMUSG00000090346	Vmn1r5	V1rc19	vomeronasal 1 receptor 5	protein-coding
common_peak2-28891-31-24-0.581382481038399-0.907273387067398	chr5	89276949	89277673	+	0	NA	Intergenic	MTD|LTR|MaLR	-38974	NM_001197147	54403	Mm.41044	NM_018760	ENSMUSG00000060961	Slc4a4	AI835705|NBC|NBC1	solute carrier family 4 (anion exchanger), member 4	protein-coding
common_peak1-16978-11-18--0.739233929191972-0.671582559449692	chr6	86793119	86793658	+	0	NA	Intergenic	RMER5|LTR|ERV1	6046	NR_028298	67170	Mm.119489	NR_028298		2610306M01Rik	-	RIKEN cDNA 2610306M01 gene	ncRNA
unique_peak2-39407-1-5--2.2120195109379-1.32905871926422	chr9	34943280	34943702	+	0	NA	intron (NM_027030, intron 3 of 5)	intron (NM_027030, intron 3 of 5)	-19096	NM_009178	20443	Mm.275973	NM_009178	ENSMUSG00000032038	St3gal4	Siat4c	ST3 beta-galactoside alpha-2,3-sialyltransferase 4	protein-coding
unique_peak2-35564-1-4--1.94898510510411-1.10720996964787	chr17	66208708	66209025	+	0	NA	intron (NM_009067, intron 4 of 9)	intron (NM_009067, intron 4 of 9)	25397	NM_001198949	19765	Mm.17009	NM_009067	ENSMUSG00000024096	Ralbp1	RLIP76|Rip1	ralA binding protein 1	protein-coding
unique_peak1-5990-9-5-0.604650905683064-1.21398586181642	chr6	99275422	99275935	+	0	NA	intron (NM_053202, intron 1 of 18)	intron (NM_053202, intron 1 of 18)	-59169	NM_001197321	108655	Mm.234965	NM_053202	ENSMUSG00000030067	Foxp1	3110052D19Rik|4932443N09Rik|AI461938|AW494214	forkhead box P1	protein-coding
common_peak2-25449-24-21-0.333778284130419-0.518921928796332	chr19	4135666	4136345	+	0	NA	exon (NM_144532, exon 6 of 6)	exon (NM_144532, exon 6 of 6)	3604	NM_144532	73660	Mm.379226	NM_144532	ENSMUSG00000024842	Cabp4	2410038D05Rik	calcium binding protein 4	protein-coding
common_peak2-23712-36-64--0.5430467268607-1.02389270236921	chr15	89354948	89356537	+	0	NA	intron (NM_021423, intron 12 of 21)	intron (NM_021423, intron 12 of 21)	25454	NM_021423	58234	Mm.146855	NM_021423	ENSMUSG00000022623	Shank3	AI841104|SHANK3c-3|SHANK3c-4|Shank3b	SH3/ankyrin domain gene 3	protein-coding
common_peak2-26238-65-63-0.492165939477127-1.34111088227537	chr2	28640794	28641940	+	0	NA	intron (NM_001033874, intron 11 of 12)	B3|SINE|B2	52569	NR_037271	100526498		NR_037271		Mir3088	mmu-mir-3088	microRNA 3088	ncRNA
common_peak1-10309-10-13--0.450939577048835-0.386243247519795	chr13	67332059	67332578	+	0	NA	Intergenic	RSINE1|SINE|B4	36876	NM_001048204	218311	Mm.82396	NM_183156	ENSMUSG00000051037	Zfp455	3732412P20Rik|Rslcan-10	zinc finger protein 455	protein-coding
common_peak2-30758-17-32--0.826097781153416-1.02859851787301	chr7	121706590	121707486	+	0	NA	promoter-TSS (NM_177382)	promoter-TSS (NM_177382)	-552	NM_177382	244209	Mm.108037	NM_177382	ENSMUSG00000030670	Cyp2r1	-	cytochrome P450, family 2, subfamily r, polypeptide 1	protein-coding
common_peak2-21627-4-6--0.830815435910851-0.989110657569874	chr11	101060542	101060872	+	0	NA	intron (NM_007970, intron 14 of 20)	intron (NM_007970, intron 14 of 20)	23276	NM_016782	53321	Mm.474527	NM_016782	ENSMUSG00000017167	Cntnap1	AI841080|Caspr|NCP1|Nrxn4|p190|shm	contactin associated protein-like 1	protein-coding
common_peak1-18366-26-39--0.3940290027289-0.556669751231374	chr8	70476254	70477077	+	0	NA	intron (NM_177698, intron 3 of 14)	ORR1A4|LTR|MaLR	21808	NM_177698	234353	Mm.32525	NM_027626	ENSMUSG00000030465	Psd3	4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D	pleckstrin and Sec7 domain containing 3	protein-coding
unique_peak1-991-20-9-1.16614668970383-1.52222891542741	chr11	69546467	69547384	+	0	NA	TTS (NM_001291068)	TTS (NM_001291068)	25210	NM_001291068	20020	Mm.16533	NM_009089	ENSMUSG00000005198	Polr2a	220kDa|Rpb1|Rpo2-1	polymerase (RNA) II (DNA directed) polypeptide A	protein-coding
common_peak2-31371-50-55-0.233585394421349-0.518477330661964	chr8	85024615	85025754	+	0	NA	Intergenic	L1MEg|LINE|L1	-98699	NM_008357	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak1-18161-28-68--1.05556533695671-2.99016688567355	chr8	13159052	13160056	+	0	NA	intron (NM_010684, intron 1 of 8)	L1MDb|LINE|L1	419	NM_010684	16783	Mm.16716	NM_010684	ENSMUSG00000031447	Lamp1	AI196048|CD107a|Lamp-1	lysosomal-associated membrane protein 1	protein-coding
unique_peak2-34715-7-6--0.00826409175941478-0.97990265578305	chr15	35021462	35021884	+	0	NA	intron (NM_019635, intron 4 of 10)	intron (NM_019635, intron 4 of 10)	63888	NM_019635	56274	Mm.262330	NM_019635	ENSMUSG00000022329	Stk3	0610042I06Rik|MST|Mst2|Mst3|Ste20|mess1	serine/threonine kinase 3	protein-coding
common_peak1-13064-93-108-0.342885538729343-1.0974520975334	chr19	6139960	6141907	+	0	NA	intron (NM_019722, intron 1 of 4)	CpG	204	NM_019722	56327	Mm.21071	NM_019722		Arl2	2610009M23Rik|AI115441|AW553335	ADP-ribosylation factor-like 2	protein-coding
common_peak2-22841-32-26-0.524204517056192-0.869438253311882	chr14	21051754	21052649	+	0	NA	Intergenic	Intergenic	36183	NM_029006	74571	Mm.105571	NM_029006	ENSMUSG00000023387	Kcnk16	4731413G05Rik|TALK-1|TALK1	potassium channel, subfamily K, member 16	protein-coding
unique_peak1-3177-7-0-2.79909083029819-2.40823996531185	chr18	41208650	41209125	+	0	NA	Intergenic	Intergenic	790872	NM_026135	383348	Mm.76366	NM_026135	ENSMUSG00000051401	Kctd16	4930434H12Rik|Gm1267	potassium channel tetramerisation domain containing 16	protein-coding
unique_peak2-37663-3-8--1.58390809140159-1.39487600375387	chr5	92856313	92856750	+	0	NA	intron (NM_183392, intron 4 of 11)	intron (NM_183392, intron 4 of 11)	7694	NM_183392	269113	Mm.275289	NM_183392	ENSMUSG00000034826	Nup54	3110079L04Rik|54kDa	nucleoporin 54	protein-coding
common_peak2-28261-12-28--1.20920501003993-1.52081014994907	chr4	126429101	126430123	+	0	NA	intron (NM_011986, intron 1 of 6)	intron (NM_011986, intron 1 of 6)	1061	NM_011986	26562	Mm.206206	NM_011986	ENSMUSG00000028833	Ncdn	AU042419|MMS10-AE|Ms10ae|mKIAA0607|norbin	neurochondrin	protein-coding
unique_peak2-38909-5-5--0.289342836727009-0.909929411522249	chr8	13673490	13673808	+	0	NA	intron (NM_009025, intron 1 of 23)	intron (NM_009025, intron 1 of 23)	3938	NM_009025	19414	Mm.18517	NM_009025	ENSMUSG00000031453	Rasa3	AI326412|C86362|E130011G04|GAPIII|scat	RAS p21 protein activator 3	protein-coding
common_peak2-23277-25-30--0.0923464050417691-0.304710633611958	chr15	27594832	27596044	+	0	NA	intron (NM_001242423, intron 1 of 7)	CpG	15859	NM_001242424	223433	Mm.266485	NM_198301	ENSMUSG00000056069	Fam105a	9830126M18	family with sequence similarity 105, member A	protein-coding
common_peak2-32039-59-68-0.216839544094409-0.512540498859089	chr9	78480669	78481787	+	0	NA	intron (NM_153098, intron 2 of 32)	intron (NM_153098, intron 2 of 32)	17875	NM_153098	235505	Mm.32955	NM_153098	ENSMUSG00000046186	Cd109	9930012E15Rik|AI480638|GARP	CD109 antigen	protein-coding
common_peak1-8414-27-27-0.184191028837632-0.393151991482004	chr10	72653983	72654761	+	0	NA	Intergenic	L1_Mus2|LINE|L1	-104919	NR_040646	327768	Mm.417745	NR_040646		A330049N07Rik	-	RIKEN cDNA A330049N07 gene	ncRNA
common_peak1-13147-44-18-1.57396532112495-4.9284567812766	chr19	10276723	10278134	+	0	NA	intron (NM_001271615, intron 1 of 1)	ID4_|SINE|ID	1005	NM_007999	14156	Mm.2952	NM_007999	ENSMUSG00000024742	Fen1	AW538437|FEN-1	flap structure specific endonuclease 1	protein-coding
unique_peak1-3426-10-1-2.35641534500877-2.57096726280955	chr19	6308494	6308922	+	0	NA	intron (NM_001033342, intron 1 of 36)	intron (NM_001033342, intron 1 of 36)	2251	NM_001033342	240505	Mm.329622	NM_001033342	ENSMUSG00000024769	Cdc42bpg	BC046418|MRCKgamma	CDC42 binding protein kinase gamma (DMPK-like)	protein-coding
common_peak2-29616-38-24-0.927596469523806-2.07189913552604	chr6	54179948	54180739	+	0	NA	intron (NM_001163640, intron 6 of 12)	MER2|DNA|MER2_type	-42473	NM_023543	69993	Mm.321147	NM_023543	ENSMUSG00000004633	Chn2	1700026N20Rik|4930557O16Rik|ARHGAP3|Bch	chimerin 2	protein-coding
common_peak2-21112-45-39-0.538429930457509-1.11442465192823	chr11	52359909	52361024	+	0	NA	Intergenic	Intergenic	150536	NM_153117	213673	Mm.291979	NM_153117	ENSMUSG00000036275	9530068E07Rik	C85061|Kct2	RIKEN cDNA 9530068E07 gene	protein-coding
common_peak1-12187-9-8-0.0196884049619079-1.03275496310833	chr17	31920793	31921224	+	0	NA	Intergenic	Intergenic	71729	NM_010831	17691	Mm.290941	NM_010831	ENSMUSG00000024042	Sik1	Msk|Sik|Snf1lk	salt inducible kinase 1	protein-coding
common_peak1-15032-10-11--0.228547155712387-0.31137425193576	chr3	121635846	121636271	+	0	NA	Intergenic	Intergenic	-20186	NM_172525	214137	Mm.229287	NM_172525	ENSMUSG00000039831	Arhgap29	6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1	Rho GTPase activating protein 29	protein-coding
unique_peak1-5687-8-0-3.00522241794757-2.70926996097583	chr6	32512723	32513236	+	0	NA	intron (NM_175750, intron 1 of 31)	intron (NM_175750, intron 1 of 31)	25213	NM_175750	243743	Mm.444029	NM_175750	ENSMUSG00000029765	Plxna4	9330117B14|Plxa4|mKIAA1550	plexin A4	protein-coding
common_peak1-11086-16-5-1.53330114154691-1.80287260729378	chr15	59410171	59410859	+	0	NA	intron (NM_026746, intron 4 of 6)	intron (NM_026746, intron 4 of 6)	-69694	NM_144549	211770	Mm.40298	NM_144549	ENSMUSG00000032501	Trib1	A530090O15Rik|TRB-1|Trb1	tribbles homolog 1 (Drosophila)	protein-coding
common_peak1-11828-13-15--0.221527969362231-0.308519316180257	chr16	78456129	78456700	+	0	NA	Intergenic	Intergenic	-78988	NM_001297747	12228	Mm.392910	NM_009770	ENSMUSG00000022863	Btg3	ANA|tob5	B cell translocation gene 3	protein-coding
common_peak2-30380-27-34--0.137737066049731-0.314192449397093	chr7	29281188	29281997	+	0	NA	promoter-TSS (NR_033605)	promoter-TSS (NR_033605)	-368	NR_033605	70001	Mm.417851	NR_033605		1700028B04Rik	-	NADH dehydrogenase (ubiquinone) 1 beta subcomplex 8 pseudogene	pseudo
unique_peak2-32554-5-7--0.704380336005853-1.01466476204226	chr1	74284317	74284728	+	0	NA	intron (NM_029711, intron 1 of 9)	intron (NM_029711, intron 1 of 9)	1398	NM_029711	76709	Mm.337038	NM_029711	ENSMUSG00000006304	Arpc2	2210023N03Rik|34kDa|p34-Arc	actin related protein 2/3 complex, subunit 2	protein-coding
common_peak2-22617-33-31-0.331337562525529-0.549429090733244	chr13	76018063	76018706	+	0	NA	intron (NM_028493, intron 8 of 11)	intron (NM_028493, intron 8 of 11)	41050	NM_053108	93692	Mm.25844	NM_053108	ENSMUSG00000021591	Glrx	C86710|D13Wsu156e|Glrx1|Grx1|TTase	glutaredoxin	protein-coding
common_peak1-17505-7-9--0.522837264589173-1.05908390183068	chr7	25788618	25789124	+	0	NA	intron (NM_001290469, intron 1 of 22)	intron (NM_001290469, intron 1 of 22)	2085	NM_001290469	232975	Mm.44101	NM_144921	ENSMUSG00000040907	Atp1a3	Atpa-2	ATPase, Na+/K+ transporting, alpha 3 polypeptide	protein-coding
common_peak1-12048-17-20--0.174021084573723-0.306598483909156	chr17	21679878	21680695	+	0	NA	intron (NM_144515, intron 2 of 4)	Lx3A|LINE|L1	7783	NM_144515	22710	Mm.296100	NM_144515		Zfp52	KRAB11|Zfp-52|Zfp76|mszf23-2|mszf24|mszf34|mszf75|zfec29	zinc finger protein 52	protein-coding
common_peak1-14209-24-37--0.454717610675869-0.572500200098104	chr2	150311425	150312267	+	0	NA	Intergenic	MT2B|LTR|ERVL	-1047	NM_001034900	545471	Mm.451002	NM_001034900	ENSMUSG00000074731	Zfp345	OTTMUSG00000015743	zinc finger protein 345	protein-coding
common_peak2-29890-59-90--0.182430639326118-0.428837433128845	chr6	113045367	113047452	+	0	NA	intron (NM_028385, intron 1 of 21)	B4A|SINE|B4	18776	NM_028385	72895	Mm.367159	NM_028385	ENSMUSG00000034269	Setd5	2900045N06Rik|C330007C20|C85544|mKIAA1757	SET domain containing 5	protein-coding
common_peak1-11521-24-33--0.294252938482622-0.390124689062463	chr16	91405603	91406504	+	0	NA	promoter-TSS (NM_008349)	promoter-TSS (NM_008349)	-427	NM_008349	16155	Mm.4154	NM_008349	ENSMUSG00000022969	Il10rb	6620401D04Rik|AI528744|CRF2-4|Crfb4|D16H21S58|D21S58h|IL-10R2|Il10r2	interleukin 10 receptor, beta	protein-coding
common_peak2-28794-45-55-0.053003103287268-0.318326940901209	chr5	64578935	64580579	+	0	NA	intron (NM_019636, intron 2 of 19)	intron (NM_019636, intron 2 of 19)	28258	NM_019636	57915	Mm.286353	NM_019636	ENSMUSG00000029174	Tbc1d1	1110062G02Rik|AI385682|AW555803|Tbc1|mKIAA1108	TBC1 domain family, member 1	protein-coding
common_peak2-32244-34-114--1.46342152394311-7.79789522501872	chrX	94797060	94798500	+	0	NA	Intergenic	L1_Mus4|LINE|L1	-225232	NM_001161433	245527	Mm.189270	NM_175540	ENSMUSG00000034457	Eda2r	9430060M22Rik|TNFRSF27|Xedar	ectodysplasin A2 receptor	protein-coding
unique_peak1-7349-11-2-1.92373108353046-2.32232533660526	chrX	13202515	13203065	+	0	NA	intron (NM_001284503, intron 6 of 26)	intron (NM_001284503, intron 6 of 26)	-7105	NM_011823	23890	Mm.487326	NM_011823	ENSMUSG00000040229	Gpr34	Lypsr1	G protein-coupled receptor 34	protein-coding
common_peak2-25908-13-27--1.02888289141984-1.21173582416604	chr19	46075711	46076544	+	0	NA	Intergenic	Intergenic	-1841	NM_176785	20170	Mm.101110	NM_176785	ENSMUSG00000074811	Hps6	5330434M19Rik|BLOC2|ru	Hermansky-Pudlak syndrome 6	protein-coding
unique_peak2-39659-4-12--1.72390023199434-1.85743853830261	chr9	107296669	107297183	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	-5285	NM_001174049	56808	Mm.273084	NM_020263	ENSMUSG00000010066	Cacna2d2	Cacna2d|a2d2|du|mKIAA0558|td|torpid	calcium channel, voltage-dependent, alpha 2/delta subunit 2	protein-coding
common_peak2-32151-9-10--0.269818212233077-1.05503135781948	chr9	108347717	108348304	+	0	NA	exon (NM_001004192, exon 4 of 4)	exon (NM_001004192, exon 4 of 4)	9197	NM_001004192	434439	Mm.78372	NM_001004192	ENSMUSG00000050641	BC048562	-	cDNA sequence BC048562	protein-coding
common_peak2-26677-34-43--0.0773630916360313-0.30358472802154	chr2	122738498	122739174	+	0	NA	Intergenic	RLTR10C|LTR|ERVK	131101	NM_021507	59010	Mm.28986	NM_021507	ENSMUSG00000005803	Sqrdl	0610039J17Rik|4930557M22Rik	sulfide quinone reductase-like (yeast)	protein-coding
unique_peak1-3667-8-0-3.00522241794757-2.70926996097583	chr19	40629872	40630430	+	0	NA	intron (NM_019698, intron 16 of 18)	intron (NM_019698, intron 16 of 18)	32802	NM_019698	56454	Mm.233117	NM_019698	ENSMUSG00000025007	Aldh18a1	2810433K04Rik|AI429789|Pycs	aldehyde dehydrogenase 18 family, member A1	protein-coding
common_peak1-15461-8-33--2.08224042330277-3.85480160428388	chr4	101870876	101871543	+	0	NA	Intergenic	Lx9|LINE|L1	-56138	NM_001177983	18578	Mm.20181	NM_019840	ENSMUSG00000028525	Pde4b	Dpde4|R74983|dunce	phosphodiesterase 4B, cAMP specific	protein-coding
unique_peak2-39182-1-6--2.43441193227435-1.56314192529759	chr8	95172770	95173091	+	0	NA	Intergenic	Intergenic	-25258	NM_022428	64379	Mm.137247	NM_022428		Irx6	-	Iroquois related homeobox 6 (Drosophila)	protein-coding
common_peak2-26342-12-6-0.841421063030034-1.58711810488664	chr2	35581541	35581980	+	0	NA	intron (NM_001001602, intron 12 of 13)	intron (NM_001001602, intron 12 of 13)	29508	NM_001290639	69601	Mm.29629	NM_001001602	ENSMUSG00000026883	Dab2ip	2310011D08Rik|AI480459|Aip1|mKIAA1743	disabled 2 interacting protein	protein-coding
common_peak2-27389-19-10-0.943255708024389-1.16735254179725	chr3	87908743	87909401	+	0	NA	intron (NM_001033484, intron 22 of 37)	intron (NM_001033484, intron 22 of 37)	23099	NM_001033484	404710	Mm.331133	NM_001033484	ENSMUSG00000028068	Iqgap3	AI593484|D030034H08	IQ motif containing GTPase activating protein 3	protein-coding
unique_peak2-33187-6-9--0.75652998450706-1.11707584880836	chr10	96699179	96699661	+	0	NA	Intergenic	Intergenic	-186692	NR_039547	100628616		NR_039547		Mir3966	mmu-mir-3966|mu-mir-3966	microRNA 3966	ncRNA
common_peak1-18535-11-8-0.338768582809301-1.14218153353838	chr8	94675920	94676462	+	0	NA	Intergenic	B4A|SINE|B4	203828	NR_110452	71296	Mm.86664	NR_033641	ENSMUSG00000031736	Crnde	4933436C20Rik	colorectal neoplasia differentially expressed (non-protein coding)	ncRNA
common_peak1-14426-20-8-1.31814978314888-1.77631109801764	chr2	180249320	180250087	+	0	NA	intron (NM_018766, intron 1 of 3)	intron (NM_018766, intron 1 of 3)	15022	NM_018766	18216	Mm.301712	NM_018766	ENSMUSG00000027568	Ntsr1	NT-1R|NTR-1|NTR1	neurotensin receptor 1	protein-coding
common_peak2-27539-32-50--0.393333322751835-0.597008909195482	chr3	96104393	96105339	+	0	NA	Intergenic	Intergenic	-6974	NM_010186	14129	Mm.150	NM_010186	ENSMUSG00000015947	Fcgr1	AI323638|AV092959|CD64|FcgammaRI|IGGHAFC	Fc receptor, IgG, high affinity I	protein-coding
unique_peak1-3490-12-1-2.64877598508764-3.36932189928148	chr19	10913007	10913552	+	0	NA	Intergenic	Intergenic	-3755	NM_023044	65221	Mm.27387	NM_023044	ENSMUSG00000024737	Slc15a3	Ci1|cI-1	solute carrier family 15, member 3	protein-coding
common_peak1-10730-10-19--0.965512749878593-0.917676348953458	chr14	64949385	64950037	+	0	NA	intron (NM_001253715, intron 1 of 4)	ID_B1|SINE|B4	86082	NM_001253716	110265	Mm.26713	NM_026322	ENSMUSG00000054733	Msra	2310045J23Rik|6530413P12Rik|MSR-A	methionine sulfoxide reductase A	protein-coding
common_peak1-15688-24-25-0.0927701846266249-0.337923771396236	chr4	139092317	139093220	+	0	NA	intron (NM_183148, intron 4 of 11)	intron (NM_183148, intron 4 of 11)	6305	NM_183148	212632	Mm.30464	NM_183148	ENSMUSG00000041025	Iffo2	C79267	intermediate filament family orphan 2	protein-coding
common_peak2-20710-30-36--0.039777956137077-0.301029995663973	chr10	94147724	94148479	+	0	NA	intron (NR_015524, intron 1 of 2)	L1M5|LINE|L1	3257	NR_015524	67723	Mm.116284	NR_015524	ENSMUSG00000097164	Cep83os	4932415G12Rik|Ccdc41os1	centrosomal protein 83, opposite strand	ncRNA
common_peak1-16640-11-7-0.508693584251613-1.21681515183528	chr6	72056669	72057399	+	0	NA	intron (NM_011375, intron 1 of 6)	intron (NM_011375, intron 1 of 6)	9432	NM_011375	20454	Mm.38248	NM_011375	ENSMUSG00000056091	St3gal5	3S-T|Siat9|[a]2	ST3 beta-galactoside alpha-2,3-sialyltransferase 5	protein-coding
common_peak2-21999-25-35--0.308075096097206-0.423354874519378	chr12	55080146	55080932	+	0	NA	intron (NM_013780, intron 6 of 11)	intron (NM_013780, intron 6 of 11)	224322	NM_028133	112407	Mm.133037	NM_028133	ENSMUSG00000035105	Egln3	2610021G09Rik|AI505553|AI648162|Hif-p4h-3|Phd3|SM-20	egl-9 family hypoxia-inducible factor 3	protein-coding
unique_peak2-32938-1-6--2.43441193227435-1.56314192529759	chr10	39626167	39626572	+	0	NA	Intergenic	Intergenic	-7325	NR_033628	213332	Mm.484359	NR_033628		AA474331	-	expressed sequence AA474331	pseudo
common_peak2-27739-6-8--0.60452689106201-1.03789460276074	chr3	126692378	126692792	+	0	NA	intron (NM_178655, intron 2 of 24)	L1MA8|LINE|L1	8785	NM_178655	109676	Mm.220242	NM_178655	ENSMUSG00000032826	Ank2	AI835472|AW491075|Ank-2	ankyrin 2, brain	protein-coding
unique_peak1-1638-6-0-2.5653981103803-2.10720996964787	chr13	51619064	51619549	+	0	NA	intron (NM_009167, intron 1 of 11)	B4|SINE|B4	43147	NM_009167	20418	Mm.131870	NM_009167	ENSMUSG00000021448	Shc3	N-Shc|Rai|ShcC	src homology 2 domain-containing transforming protein C3	protein-coding
common_peak2-31693-37-69--0.603289945459148-1.30667537457952	chr9	107872035	107873109	+	0	NA	intron (NM_011634, intron 12 of 14)	B1F|SINE|Alu	-5326	NM_023738	74153	Mm.277125	NM_023738	ENSMUSG00000032596	Uba7	1300004C08Rik|Ube1l	ubiquitin-like modifier activating enzyme 7	protein-coding
common_peak2-23605-16-25--0.58217607587303-0.633951497070961	chr15	81465519	81466124	+	0	NA	intron (NM_177821, intron 20 of 30)	intron (NM_177821, intron 20 of 30)	-28498	NM_001289712	214669	Mm.280768	NM_145993	ENSMUSG00000022394	L3mbtl2	4732493N06Rik|M4mbt	l(3)mbt-like 2 (Drosophila)	protein-coding
common_peak2-20899-12-10-0.189344366450341-0.386243247519795	chr11	4265852	4266444	+	0	NA	intron (NM_029458, intron 10 of 10)	MTD|LTR|MaLR	74937	NM_029458	75828	Mm.159592	NM_029458	ENSMUSG00000020419	Hormad2	4930529M09Rik	HORMA domain containing 2	protein-coding
common_peak2-22529-41-99--0.942707484926064-3.53109843382357	chr13	55444093	55445951	+	0	NA	TTS (NM_025828)	TTS (NM_025828)	-13931	NM_016662	17121	Mm.20350	NM_016662	ENSMUSG00000021485	Mxd3	4631412E13Rik|Mad3|bHLHc13	Max dimerization protein 3	protein-coding
unique_peak2-37910-1-7--2.62705701021674-1.80617997398389	chr5	143560945	143561389	+	0	NA	intron (NM_001122730, intron 2 of 18)	intron (NM_001122730, intron 2 of 18)	17899	NM_178242	231861	Mm.354649	NM_178242	ENSMUSG00000039477	Tnrc18	BC025631|EG381742|Zfp469	trinucleotide repeat containing 18	protein-coding
common_peak1-12825-29-15-1.11229008061511-2.08778000015696	chr18	69303108	69304119	+	0	NA	Intergenic	Intergenic	-121686	NR_105780	102465187		NR_105780	miRBase:MI0021890	Mir145b	mmu-mir-145b	microRNA mir-145b	ncRNA
unique_peak2-34692-4-7--1.02346051385325-1.09384600808989	chr15	25635676	25636082	+	0	NA	intron (NM_019472, intron 3 of 40)	intron (NM_019472, intron 3 of 40)	83574	NM_019472	17909	Mm.60590	NM_019472	ENSMUSG00000022272	Myo10	AW048724|D15Ertd600e|mKIAA0799	myosin X	protein-coding
common_peak1-17815-27-41--0.400771471883525-0.542588322087496	chr7	101905870	101906574	+	0	NA	Intergenic	GA-rich|Low_complexity|Low_complexity	-1452925	NM_011858	23966	Mm.254610	NM_011858	ENSMUSG00000048078	Tenm4	Doc4|ELM2|Odz4|R75022|Ten-m4|l(7)-3Rn|l7Rn3|mKIAA1302	teneurin transmembrane protein 4	protein-coding
common_peak2-25900-12-13--0.158578936969966-0.301029995663979	chr19	45748936	45749521	+	0	NA	Intergenic	Intergenic	-14545	NM_013907	30838	Mm.254739	NM_013907	ENSMUSG00000040913	Fbxw4	Dac|Fbw4|SHFM3|SHSF3|dactylin|dactylyn	F-box and WD-40 domain protein 4	protein-coding
common_peak1-9530-21-19-0.247561170378873-0.427564438475253	chr11	115974087	115975205	+	0	NA	Intergenic	Intergenic	-3097	NM_172570	217333	Mm.347770	NM_172570	ENSMUSG00000020773	Trim47	2210023F24Rik	tripartite motif-containing 47	protein-coding
common_peak2-26332-43-61--0.171633124863172-0.368450600203475	chr2	34802219	34803015	+	0	NA	intron (NM_009421, intron 8 of 10)	L2b|LINE|L2	14675	NM_009421	22029	Mm.239514	NM_009421	ENSMUSG00000026875	Traf1	4732496E14Rik	TNF receptor-associated factor 1	protein-coding
common_peak1-9730-78-55-0.999466172102931-4.61175505114613	chr12	36381132	36382537	+	0	NA	Intergenic	Intergenic	-2044	NR_045050	71581	Mm.100110	NR_045050		9130015A21Rik	-	RIKEN cDNA 9130015A21 gene	ncRNA
common_peak1-14688-51-37-0.826996312158988-2.20715782907905	chr3	65665464	65666977	+	0	NA	Intergenic	Intergenic	95927	NM_019937	56706	Mm.175612	NM_019937	ENSMUSG00000027829	Ccnl1	2610030E23Rik|AU018493|Ccnl|ania-6a	cyclin L1	protein-coding
common_peak2-22534-67-67-0.456948641532656-1.2225580734244	chr13	55692776	55693959	+	0	NA	Intergenic	RMER17C|LTR|ERVK	-1129	NM_026211	67511	Mm.45233	NM_026211	ENSMUSG00000058569	Tmed9	2400003B06Rik	transmembrane emp24 protein transport domain containing 9	protein-coding
unique_peak1-6269-10-2-1.77145284428761-2.09384600808989	chr7	25389721	25390245	+	0	NA	intron (NM_023154, intron 4 of 7)	B1_Mus2|SINE|Alu	-6364	NM_001102613	232970	Mm.333663	NM_001102613	ENSMUSG00000074277	Phldb3	EG232970|ENSMUSG00000061511|Gm10102	pleckstrin homology-like domain, family B, member 3	protein-coding
common_peak2-19906-17-29--0.688594257403481-0.756750750680359	chr1	118389493	118390226	+	0	NA	intron (NM_001077425, intron 19 of 23)	L1Md_T|LINE|L1	808145	NM_001077425	636808	Mm.101576	NM_001077425	ENSMUSG00000070695	Cntnap5a	Caspr5-1|EG636808	contactin associated protein-like 5A	protein-coding
unique_peak2-33051-5-11--1.28934283672701-1.477227296591	chr10	75667634	75668329	+	0	NA	Intergenic	B1F|SINE|Alu	2173	NR_030443	751554		NR_030443	miRBase:MI0004635	Mir678	Mirn678|mmu-mir-678	microRNA 678	ncRNA
common_peak2-29639-9-16--0.897849434846119-0.732381977911291	chr6	59208706	59209228	+	0	NA	Intergenic	Intergenic	50103	NM_001081145	68140	Mm.25843	NM_001081145	ENSMUSG00000049232	Tigd2	3632410O17Rik	tigger transposable element derived 2	protein-coding
common_peak1-18691-9-9--0.132314688483142-1.03275496310833	chr8	120500505	120501012	+	0	NA	Intergenic	Intergenic	-174929	NM_026758	68533	Mm.181836	NM_026758	ENSMUSG00000031843	Mphosph6	1110001M01Rik|AA536809|C86426	M phase phosphoprotein 6	protein-coding
common_peak2-30001-16-12-0.417823924126969-0.489164546851866	chr6	124693962	124694540	+	0	NA	intron (NM_007881, intron 7 of 9)	intron (NM_007881, intron 7 of 9)	-3154	NM_013535	14790	Mm.439877	NM_013535		Grcc10	2310033H05Rik|C10	gene rich cluster, C10 gene	protein-coding
common_peak1-13000-87-65-0.951242986422716-4.84950281702474	chr19	4476480	4477768	+	0	NA	promoter-TSS (NM_134164)	promoter-TSS (NM_134164)	19	NM_134164	171180	Mm.262270	NM_134164	ENSMUSG00000049303	Syt12	-	synaptotagmin XII	protein-coding
common_peak1-13707-38-25-0.871012941157439-1.90173050117047	chr2	30693342	30694235	+	0	NA	Intergenic	Intergenic	-7099	NM_009116	20204	Mm.1802	NM_009116	ENSMUSG00000039476	Prrx2	Prx2|S8	paired related homeobox 2	protein-coding
common_peak1-12512-54-23-1.58812326090858-6.06281705275762	chr18	38928007	38929965	+	0	NA	Intergenic	Intergenic	-123124	NM_001033789	545253	Mm.244585	NM_001033789		Gm5820	EG545253	predicted gene 5820	protein-coding
unique_peak1-213-11-6-0.701338662194009-1.32595962126035	chr1	87550569	87551149	+	0	NA	intron (NM_013673, intron 1 of 19)	B4A|SINE|B4	4234	NM_013673	20684	Mm.290906	NM_013673	ENSMUSG00000026222	Sp100	A430075G10Rik	nuclear antigen Sp100	protein-coding
unique_peak1-1961-30-2-3.58471290877072-8.33734317840678	chr14	105799804	105800803	+	0	NA	Intergenic	B4A|SINE|B4	-26473	NR_045859	71362	Mm.410781	NR_045859		5430440P10Rik	-	RIKEN cDNA 5430440P10 gene	ncRNA
unique_peak2-37074-2-14--2.82434485187184-3.03832868024006	chr3	146545885	146546628	+	0	NA	intron (NM_027594, intron 1 of 20)	MTC|LTR|MaLR	30925	NM_027594	70892	Mm.187793	NM_027594	ENSMUSG00000036745	Ttll7	1110049N09Rik|4921517B04Rik|C630030B20|Ttll7s	tubulin tyrosine ligase-like family, member 7	protein-coding
common_peak1-19477-17-19--0.103631756682325-0.301029995663974	chrX	135742512	135743117	+	0	NA	Intergenic	RSINE1|SINE|B4	-1769	NM_175541	245631	Mm.131001	NM_175541	ENSMUSG00000042515	Mum1l1	9430086K21Rik	melanoma associated antigen (mutated) 1-like 1	protein-coding
common_peak2-22622-123-200--0.0552284411721216-0.32810576536246	chr13	80885336	80887170	+	0	NA	Intergenic	Intergenic	-136430	NM_001042591	105171	Mm.423137	NM_001042591	ENSMUSG00000074794	Arrdc3	AI450344|mKIAA1376	arrestin domain containing 3	protein-coding
common_peak1-16387-18-23--0.272043349492805-0.34651636097721	chr5	123907152	123908030	+	0	NA	3' UTR (NM_133917, exon 17 of 17)	3' UTR (NM_133917, exon 17 of 17)	24519	NM_029594	76399	Mm.75049	NM_029594	ENSMUSG00000029437	Il31	1700013B14Rik	interleukin 31	protein-coding
unique_peak1-724-7-1-1.79909083029819-1.80617997398389	chr10	94040222	94040748	+	0	NA	intron (NM_177026, intron 1 of 3)	URR1A|DNA|MER1_type	1477	NM_177026	319880	Mm.23047	NM_172051	ENSMUSG00000020023	Tmcc3	AW488095|C630016B22Rik|C88213|Tmcc1	transmembrane and coiled coil domains 3	protein-coding
unique_peak2-35164-1-10--3.08648862885404-2.57096726280955	chr16	34489864	34490409	+	0	NA	intron (NM_177357, intron 1 of 59)	intron (NM_177357, intron 1 of 59)	23977	NM_001164268	545156	Mm.82274	NM_177357	ENSMUSG00000061751	Kalrn	2210407G14Rik|AV235988|DUET|E530005C20Rik|Gm539|Hapip|TRAD	kalirin, RhoGEF kinase	protein-coding
unique_peak1-6537-10-6-0.549060422951165-1.21398586181642	chr7	125580987	125581495	+	0	NA	intron (NM_138649, intron 3 of 7)	(CAGA)n|Simple_repeat|Simple_repeat	5825	NM_138649	110058	Mm.156558	NM_138649	ENSMUSG00000058420	Syt17	Bk	synaptotagmin XVII	protein-coding
common_peak2-25418-34-26-0.627181024837798-1.12624088074371	chr19	55541706	55542619	+	0	NA	intron (NM_016862, intron 5 of 7)	intron (NM_016862, intron 5 of 7)	151615	NM_001293686	53611	Mm.258637	NM_016862	ENSMUSG00000024983	Vti1a	1110014F16Rik|1110018K19Rik|4921537J05Rik|MVti1|MVti1a|Vti1|Vti1-rp2	vesicle transport through interaction with t-SNAREs 1A	protein-coding
common_peak1-17391-26-29-0.0210084965499435-0.304710633611964	chr7	141901588	141902699	+	0	NA	intron (NM_001033420, intron 1 of 51)	intron (NM_001033420, intron 1 of 51)	39773	NM_001033420	330662	Mm.436572	NM_001033420	ENSMUSG00000058325	Dock1	9130006G06Rik|AI854900|D630004B07Rik	dedicator of cytokinesis 1	protein-coding
unique_peak1-3373-7-0-2.79909083029819-2.40823996531185	chr19	3631804	3632330	+	0	NA	intron (NM_008513, intron 5 of 22)	intron (NM_008513, intron 5 of 22)	54497	NM_008513	16973	Mm.274581	NM_008513	ENSMUSG00000024913	Lrp5	BMND1|HBM|LR3|LRP7|OPPG|mKIAA4142	low density lipoprotein receptor-related protein 5	protein-coding
unique_peak1-589-10-2-1.77145284428761-2.09384600808989	chr10	12298501	12299027	+	0	NA	intron (NM_011682, intron 50 of 73)	ORR1D1-int|LTR|MaLR	282769	NM_011682	22288	Mm.331784	NM_011682	ENSMUSG00000019820	Utrn	AA589569|DRP|Dmdl	utrophin	protein-coding
common_peak1-18734-32-29-0.372201423611141-0.621525249893804	chr8	123716185	123717457	+	0	NA	Intergenic	B3|SINE|B2	65236	NM_008024	14241	Mm.5111	NM_008024	ENSMUSG00000097084	Foxl1	FREAC7|Fkh6|fkh-6	forkhead box L1	protein-coding
common_peak1-17065-15-22--0.511397205501357-0.50761186003982	chr6	100670418	100671156	+	0	NA	intron (NM_198612, intron 1 of 6)	B4A|SINE|B4	16059	NM_198612	232313	Mm.272037	NM_198612	ENSMUSG00000030074	Gxylt2	Glt8d4|Gm152	glucoside xylosyltransferase 2	protein-coding
unique_peak1-2950-17-4-1.89636824331768-2.60953805094651	chr17	70709401	70710361	+	0	NA	Intergenic	Intergenic	-64251	NM_177639	224997	Mm.311840	NM_027712	ENSMUSG00000003279	Dlgap1	4933422O14Rik|9630002F18|AI845682|AI848168|BB075781|D17Bwg0511e|GKAP/SAPAP|GKPA/SAPAP|Gkap|Sapap1|mKIAA4162	discs, large (Drosophila) homolog-associated protein 1	protein-coding
common_peak1-7826-12-9-0.326847890200276-0.459837087125828	chr1	127233851	127234338	+	0	NA	Intergenic	Intergenic	98210	NM_023735	74117	Mm.183102	NM_023735	ENSMUSG00000026341	Actr3	1200003A09Rik|Arp3	ARP3 actin-related protein 3	protein-coding
unique_peak2-38045-7-7--0.200909169701811-0.97990265578305	chr6	38998316	38998771	+	0	NA	intron (NM_011539, intron 9 of 12)	intron (NM_011539, intron 9 of 12)	19042	NR_040523	69986	Mm.490941	NR_040523		1700025N23Rik	-	RIKEN cDNA 1700025N23 gene	ncRNA
common_peak2-21507-71-135--0.443018662530368-1.4371900896674	chr11	93995281	93997233	+	0	NA	Intergenic	Intergenic	-76511	NM_009427	22057	Mm.259673	NM_009427	ENSMUSG00000037573	Tob1	Tob|Trob	transducer of ErbB-2.1	protein-coding
common_peak1-14018-7-10--0.660340788339108-1.12966497611638	chr2	112284592	112285091	+	0	NA	Intergenic	Intergenic	-10341	NM_133749	73024	Mm.268027	NM_133749		Emc7	2900064A13Rik|AI451465|ORF3|c11orf3	ER membrane protein complex subunit 7	protein-coding
common_peak2-31243-43-87--0.676868433113595-1.88046737755849	chr8	70509801	70511147	+	0	NA	Intergenic	Intergenic	-12001	NM_177698	234353	Mm.32525	NM_027626	ENSMUSG00000030465	Psd3	4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D	pleckstrin and Sec7 domain containing 3	protein-coding
common_peak1-15327-119-177-0.0627044901636467-0.349489304152541	chr4	46450451	46453036	+	0	NA	Intergenic	B1_Mur2|SINE|Alu	-12246	NM_130889	67628	Mm.263913	NM_130889	ENSMUSG00000028333	Anp32b	2410015B15Rik|PAL31|PHAPI2a|Ssp29	acidic (leucine-rich) nuclear phosphoprotein 32 family, member B	protein-coding
common_peak2-20312-9-17--0.980311595038092-0.844317084070804	chr10	27983576	27984202	+	0	NA	intron (NM_008983, intron 3 of 31)	intron (NM_008983, intron 3 of 31)	189263	NM_008983	19272	Mm.332303	NM_008983	ENSMUSG00000019889	Ptprk	AI853699|PTPk|RPTPkappa	protein tyrosine phosphatase, receptor type, K	protein-coding
common_peak2-31891-11-19--0.813234510635749-0.769930178837768	chr9	56418523	56419230	+	0	NA	Intergenic	Intergenic	114184	NM_181074	235402	Mm.246605	NM_181074	ENSMUSG00000049556	Lingo1	4930471K13Rik|AV148400|LERN1|LINGO-1|Lrrn6a|UNQ201	leucine rich repeat and Ig domain containing 1	protein-coding
common_peak2-32377-7-8--0.370834171144123-1.00793137938329	chrX	106920553	106920909	+	0	NA	Intergenic	Intergenic	528636	NM_001037917	622976	Mm.482747	NM_001037917	ENSMUSG00000048621	Gm6377	EG622976	predicted gene 6377	protein-coding
unique_peak2-38651-3-7--1.41398308995928-1.23214870625617	chr7	93253893	93254355	+	0	NA	Intergenic	L1Md_F2|LINE|L1	66110	NM_001102578	546981	Mm.469835	NM_001102578	ENSMUSG00000090436	Vmn2r75	EG546981	vomeronasal 2, receptor 75	protein-coding
unique_peak1-1298-6-0-2.5653981103803-2.10720996964787	chr11	120037247	120037750	+	0	NA	Intergenic	Intergenic	13672	NR_030682	100042332	Mm.269766	NR_030682		2810410L24Rik	-	RIKEN cDNA 2810410L24 gene	ncRNA
common_peak2-27460-25-23-0.27688740462395-0.451698068655807	chr3	90549709	90550523	+	0	NA	Intergenic	L1VL4|LINE|L1	19288	NM_207263	384997	Mm.316644	NM_207263	ENSMUSG00000042250	Pglyrp4	Gm1478|Gm413	peptidoglycan recognition protein 4	protein-coding
common_peak2-26482-41-41-0.3088312820699-0.584217371416963	chr2	79635245	79636224	+	0	NA	intron (NM_001290743, intron 4 of 4)	RMER17A2|LTR|ERVK	87797	NM_001290743	75276	Mm.257373	NM_172420	ENSMUSG00000034683	Ppp1r1c	4930565M23Rik|4930579P15Rik	protein phosphatase 1, regulatory (inhibitor) subunit 1C	protein-coding
unique_peak2-37171-4-9--1.34538860874061-1.36011389749466	chr4	46092440	46092876	+	0	NA	intron (NM_021883, intron 3 of 9)	MIRm|SINE|MIR	40564	NM_021883	21916	Mm.249594	NM_021883	ENSMUSG00000028328	Tmod1	E-Tmod|Tmod	tropomodulin 1	protein-coding
unique_peak1-1916-11-1-2.50869358425161-2.83420869758413	chr14	73503883	73504351	+	0	NA	Intergenic	RLTR22_Mus|LTR|ERVK	-38200	NM_001170694	105670	Mm.280068	NM_134083	ENSMUSG00000022106	Rcbtb2	2610028E02Rik|2810420M18Rik|AI448345|AW240694|Chc1l|RC/BTB2	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2	protein-coding
unique_peak2-35508-10-10--0.103016273628528-0.301029995663987	chr17	47296881	47297418	+	0	NA	intron (NM_001097623, intron 3 of 19)	intron (NM_001097623, intron 3 of 19)	19258	NM_001097623	224829	Mm.260989	NM_172622	ENSMUSG00000064043	Trerf1	9430096I18Rik|AI429294|B830015H24|RAPA|Trep-132|Trep132	transcriptional regulating factor 1	protein-coding
unique_peak1-1392-16-5-1.53330114154691-1.80287260729378	chr12	69457644	69458443	+	0	NA	Intergenic	Intergenic	-687785	NR_033146	100316870	Mm.379794	NR_033146		Gm17821	-	DDB1 and CUL4 associated factor 5 pseudogene	pseudo
common_peak2-31655-13-15--0.221527969362231-0.308519316180257	chr8	126550499	126551200	+	0	NA	intron (NM_001029876, intron 2 of 8)	B1_Mus2|SINE|Alu	3476	NM_001029876	382038	Mm.334891	NM_001029876	ENSMUSG00000031976	Urb2	C77575|mKIAA0133	URB2 ribosome biogenesis 2 homolog (S. cerevisiae)	protein-coding
common_peak1-19165-48-76--0.295859389460086-0.565429786553928	chr9	95954656	95955499	+	0	NA	Intergenic	Intergenic	-64771	NM_177352	235533	Mm.213651	NM_177352	ENSMUSG00000041440	Gk5	AV095337|C330018K18Rik|G630067D24Rik	glycerol kinase 5 (putative)	protein-coding
unique_peak2-36796-6-5--0.0195643903408542-0.947717972411649	chr3	81917296	81917672	+	0	NA	intron (NM_021896, intron 2 of 8)	A-rich|Low_complexity|Low_complexity	-7253	NR_105977	102466991		NR_105977		Mir7010	mmu-mir-7010	microRNA mir-7010	ncRNA
unique_peak1-4036-7-4-0.477162735410827-1.09384600808989	chr2	57253282	57253764	+	0	NA	Intergenic	Intergenic	162730	NM_010274	14571	Mm.3711	NM_010274	ENSMUSG00000026827	Gpd2	AA408484|AI448216|AU021455|AW494132|GPDH|Gdm1|Gpd-m|Gpdh-m|TISP38	glycerol phosphate dehydrogenase 2, mitochondrial	protein-coding
common_peak1-11691-24-22-0.269647946710704-0.457753417732779	chr16	30550004	30550870	+	0	NA	intron (NM_172614, intron 1 of 9)	CpG	227	NM_172614	224090	Mm.241459	NM_172614		Tmem44	1700007N03Rik|9330161C17Rik|B230220N21	transmembrane protein 44	protein-coding
unique_peak2-35721-4-5--0.608423014574403-0.909929411522249	chr18	34511042	34511395	+	0	NA	intron (NM_007874, intron 3 of 4)	RMER12|LTR|ERVK	20419	NM_025527	66384	Mm.29452	NM_025527	ENSMUSG00000014504	Srp19	2310020D23Rik	signal recognition particle 19	protein-coding
common_peak2-30429-15-13-0.204809828498052-0.368541233333383	chr7	44304260	44304884	+	0	NA	Intergenic	Intergenic	2215332	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak2-28983-18-23--0.272043349492805-0.34651636097721	chr5	105731445	105732709	+	0	NA	Intergenic	Intergenic	-9359	NM_194336	100702	Mm.491210	NM_194336	ENSMUSG00000079362	Gbp6	AI595338|Mpa2l	guanylate binding protein 6	protein-coding
unique_peak1-608-52-15-2.1082599902657-8.47004574894621	chr10	21775954	21777311	+	0	NA	Intergenic	Intergenic	11253	NM_053264	114671	Mm.288194	NM_053264	ENSMUSG00000069712	4930444G20Rik	-	RIKEN cDNA 4930444G20 gene	protein-coding
unique_peak1-2931-8-0-3.00522241794757-2.70926996097583	chr17	54298235	54298686	+	0	NA	Intergenic	Intergenic	139899	NM_022025	63993	Mm.155241	NM_022025	ENSMUSG00000023945	Slc5a7	CHT1	solute carrier family 5 (choline transporter), member 7	protein-coding
unique_peak1-6629-11-2-1.92373108353046-2.32232533660526	chr8	10854194	10854882	+	0	NA	Intergenic	Intergenic	27916	NR_040705	320014	Mm.403203	NR_040705		B930025P03Rik	-	RIKEN cDNA B930025P03 gene	ncRNA
common_peak1-7451-11-12--0.191746133889479-0.310474156842889	chr1	74661767	74662374	+	0	NA	intron (NM_175031, intron 10 of 26)	intron (NM_175031, intron 10 of 26)	14041	NM_175031	269209	Mm.310974	NM_175031	ENSMUSG00000033276	Stk36	1700112N14Rik|B930045J24|FU|Fused|mKIAA1278	serine/threonine kinase 36	protein-coding
unique_peak2-39244-7-10--0.660340788339108-1.12966497611638	chr8	113878456	113879009	+	0	NA	intron (NM_178086, intron 4 of 6)	intron (NM_178086, intron 4 of 6)	-16929	NM_029005	74568	Mm.207971	NM_029005	ENSMUSG00000012519	Mlkl	9130019I15Rik	mixed lineage kinase domain-like	protein-coding
unique_peak2-34279-4-7--1.02346051385325-1.09384600808989	chr13	68581899	68582215	+	0	NA	Intergenic	RLTR6-int|LTR|ERV1	138941	NM_172480	210009	Mm.205514	NM_172480	ENSMUSG00000034617	Mtrr	4732420G08|MSR	5-methyltetrahydrofolate-homocysteine methyltransferase reductase	protein-coding
common_peak2-22616-58-92--0.243208876217534-0.515844704882417	chr13	75942953	75944264	+	0	NA	Intergenic	Intergenic	-33726	NM_053108	93692	Mm.25844	NM_053108	ENSMUSG00000021591	Glrx	C86710|D13Wsu156e|Glrx1|Grx1|TTase	glutaredoxin	protein-coding
unique_peak1-6562-9-2-1.60465090568306-1.87199725847353	chr7	131011226	131011759	+	0	NA	Intergenic	Intergenic	-115203	NM_001252072	628779	Mm.40210	NM_001252072	ENSMUSG00000078591	Hs3st4	EG628779|Gm6915	heparan sulfate (glucosamine) 3-O-sulfotransferase 4	protein-coding
common_peak2-22630-36-55--0.328033835889849-0.518540604135986	chr13	86046055	86046888	+	0	NA	Intergenic	L1MA4|LINE|L1	139929	NM_007749	12867	Mm.378898	NM_007749		Cox7c	COXVIIc|Cox7c1	cytochrome c oxidase subunit VIIc	protein-coding
unique_peak1-2601-10-4-1.03448725012141-1.5150158574804	chr16	32804500	32805031	+	0	NA	TTS (NM_001256309)	TTS (NM_001256309)	5767	NM_001256309	381043	Mm.303864	NM_001256309		Gm933	Gm1743	predicted gene 933	protein-coding
common_peak1-17704-22-8-1.47735910364509-2.29727994934156	chr7	75584788	75585813	+	0	NA	Intergenic	B4|SINE|B4	22990	NR_046208	71244	Mm.410787	NR_046208		4933436H12Rik	-	RIKEN cDNA 4933436H12 gene	ncRNA
unique_peak1-6377-14-1-2.89921616035764-3.91338994363176	chr7	70423196	70423940	+	0	NA	Intergenic	L1MC|LINE|L1	-66156	NM_007390	11441	Mm.113464	NM_007390	ENSMUSG00000030525	Chrna7	Acra7|alpha7	cholinergic receptor, nicotinic, alpha polypeptide 7	protein-coding
common_peak1-18806-22-46--0.907304746590233-1.67017740290565	chr9	75070851	75071748	+	0	NA	3' UTR (NM_010864, exon 41 of 41)	3' UTR (NM_010864, exon 41 of 41)	-8522	NM_001081322	208943	Mm.41339	NM_001081322	ENSMUSG00000033590	Myo5c	9130003O20Rik|BB085560|C330029I24	myosin VC	protein-coding
common_peak1-10853-6-6--0.241956811677302-0.947717972411649	chr14	121053253	121053771	+	0	NA	Intergenic	MLT1E2|LTR|MaLR	175829	NM_029519	76108	Mm.261448	NM_029519	ENSMUSG00000051615	Rap2a	5830461H18Rik	RAS related protein 2a	protein-coding
unique_peak2-35676-9-8-0.0196884049619079-1.03275496310833	chr18	12643368	12643777	+	0	NA	intron (NM_010680, intron 32 of 74)	intron (NM_010680, intron 32 of 74)	151039	NM_010680	16774	Mm.42012	NM_010680	ENSMUSG00000024421	Lama3	Lama3B|[a]3B	laminin, alpha 3	protein-coding
unique_peak1-2465-7-3-0.799090830298189-1.23214870625617	chr16	14352092	14352431	+	0	NA	Intergenic	RSINE1|SINE|B4	-9390	NM_008576	17250	Mm.196634	NM_008576	ENSMUSG00000023088	Abcc1	Abcc1a|Abcc1b|MRP|Mdrap|Mrp1	ATP-binding cassette, sub-family C (CFTR/MRP), member 1	protein-coding
common_peak2-23986-9-11--0.395349094316936-0.344532117358383	chr16	18194508	18195176	+	0	NA	Intergenic	Intergenic	18784	NR_027843	66779	Mm.387525	NR_015575		4933432I09Rik	-	RIKEN cDNA 4933432I09 gene	ncRNA
unique_peak1-78-8-0-3.00522241794757-2.70926996097583	chr1	40053231	40053782	+	0	NA	intron (NM_008696, intron 12 of 30)	intron (NM_008696, intron 12 of 30)	-88107	NM_010555	16178	Mm.1349	NM_010555	ENSMUSG00000026073	Il1r2	CD121b|Il1r-2	interleukin 1 receptor, type II	protein-coding
unique_peak2-33710-6-5--0.0195643903408542-0.947717972411649	chr11	110307510	110307900	+	0	NA	intron (NM_011943, intron 1 of 11)	intron (NM_011943, intron 1 of 11)	47269	NM_011943	26399	Mm.14487	NM_011943	ENSMUSG00000020623	Map2k6	MEK6|MKK6|Prkmk6|SAPKK3	mitogen-activated protein kinase kinase 6	protein-coding
unique_peak1-6357-9-0-3.18961340640422-3.01029995663981	chr7	66180457	66181032	+	0	NA	Intergenic	Intergenic	267172	NM_009728	11982	Mm.135129	NM_009728	ENSMUSG00000025324	Atp10a	Atp10c|pfatp	ATPase, class V, type 10A	protein-coding
unique_peak1-7039-13-6-0.971117108580164-1.01572999746118	chr8	126920312	126920924	+	0	NA	intron (NM_171824, intron 1 of 6)	intron (NM_171824, intron 1 of 6)	37218	NM_171824	209966	Mm.234233	NM_171824	ENSMUSG00000050751	Pgbd5	2900019M05Rik|AI854313	piggyBac transposable element derived 5	protein-coding
unique_peak1-6501-9-1-2.18961340640422-2.31132995230379	chr7	114848271	114848830	+	0	NA	intron (NM_001163557, intron 6 of 25)	intron (NM_001163557, intron 6 of 25)	52996	NM_001205227	320635	Mm.132828	NM_177216	ENSMUSG00000048065	Cyb5r2	D630003K02Rik|b5R.2	cytochrome b5 reductase 2	protein-coding
common_peak1-9271-80-180--0.649270120713854-3.43668656224077	chr11	87447961	87448913	+	0	NA	intron (NM_001045527, intron 3 of 5)	B1F2|SINE|Alu	17771	NM_001045527	327992	Mm.390371	NM_001045527	ENSMUSG00000070345	Hsf5	Gm739|MLZ-220	heat shock transcription factor family member 5	protein-coding
common_peak2-23301-66-91--0.00507829163117179-0.302216598514508	chr15	35155003	35155738	+	0	NA	Intergenic	(TA)n|Simple_repeat|Simple_repeat	-69809	NM_019635	56274	Mm.262330	NM_019635	ENSMUSG00000022329	Stk3	0610042I06Rik|MST|Mst2|Mst3|Ste20|mess1	serine/threonine kinase 3	protein-coding
common_peak1-14175-12-7-0.648775985087639-0.697979855752659	chr2	143853210	143853784	+	0	NA	Intergenic	MTB_Mm|LTR|MaLR	-5341	NM_001044750	403171	Mm.389362	NM_207275	ENSMUSG00000037307	Banf2	4930517K23Rik|Baf-L|Baf-like|Gm115	barrier to autointegration factor 2	protein-coding
common_peak1-10228-18-17-0.142994149786039-0.353907621462753	chr13	51892210	51893064	+	0	NA	Intergenic	Intergenic	-3521	NM_013660	20354	Mm.33903	NM_013660	ENSMUSG00000021451	Sema4d	CD100|Semacl2|Semaj|Semcl2|coll-4	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D	protein-coding
common_peak2-28430-10-8-0.186490343566457-1.078512453669	chr4	148448584	148448926	+	0	NA	intron (NM_019781, intron 2 of 8)	intron (NM_019781, intron 2 of 8)	25166	NM_019781	56273	Mm.184172	NM_019781	ENSMUSG00000028975	Pex14	Pex14p|R75137	peroxisomal biogenesis factor 14	protein-coding
common_peak2-25637-48-40-0.613375146616731-1.42573967311544	chr19	9106855	9107964	+	0	NA	intron (NR_104460, intron 4 of 6)	ID_B1|SINE|B4	43635	NM_001286518	66395	Mm.203866	NM_009643	ENSMUSG00000069833	Ahnak	DY6	AHNAK nucleoprotein (desmoyokin)	protein-coding
unique_peak1-4708-12-2-2.06381348436648-2.79529063155376	chr3	102484292	102484945	+	0	NA	Intergenic	Intergenic	-54075	NM_027533	70747	Mm.27469	NM_027533	ENSMUSG00000027858	Tspan2	6330415F13Rik|B230119D02Rik|tspan-2	tetraspanin 2	protein-coding
common_peak1-17428-44-56--0.0109971795962061-0.30295167774669	chr7	13033822	13034822	+	0	NA	Intergenic	Intergenic	-26482	NM_001033820	619331	Mm.361832	NM_001033820	ENSMUSG00000034071	Zfp551	9630004E07Rik|Znf551	zinc fingr protein 551	protein-coding
common_peak2-29842-52-89--0.383593106063976-0.852247424042116	chr6	97178446	97179911	+	0	NA	intron (NM_022992, intron 1 of 2)	intron (NM_022992, intron 1 of 2)	18392	NM_022992	65106	Mm.291014	NM_022992	ENSMUSG00000035199	Arl6ip5	5930404D22Rik|AV001879|Aip-5|Gtrap3-18|addiscin	ADP-ribosylation factor-like 6 interacting protein 5	protein-coding
common_peak1-11095-48-68--0.137597305543355-0.342480376340174	chr15	59758830	59760686	+	0	NA	Intergenic	Intergenic	88415	NM_027668	71088	Mm.425950	NM_027668	ENSMUSG00000071749	4933412E24Rik	-	RIKEN cDNA 4933412E24 gene	protein-coding
common_peak1-16308-7-8--0.370834171144123-1.00793137938329	chr5	114443692	114444022	+	0	NA	promoter-TSS (NM_198109)	promoter-TSS (NM_198109)	-91	NM_198109	231637	Mm.389682	NM_198109	ENSMUSG00000042121	Ssh1	AW551225|Gm1394|Gm1395|SSH-1|mSSH-1L	slingshot homolog 1 (Drosophila)	protein-coding
unique_peak2-34751-7-18--1.4488366831454-1.38887104242188	chr15	54949275	54950159	+	0	NA	intron (NM_145470, intron 1 of 8)	(TG)n|Simple_repeat|Simple_repeat	-4580	NR_045093	100503794	Mm.360519	NR_045093	ENSMUSG00000053749	Gm9920	ENSMUSG00000053749	predicted gene 9920	ncRNA
unique_peak2-33853-3-12--2.11442280810037-2.15846853396659	chr12	17289456	17290066	+	0	NA	intron (NM_027959, intron 11 of 12)	intron (NM_027959, intron 11 of 12)	16360	NM_027959	71853	Mm.222825	NM_027959	ENSMUSG00000020571	Pdia6	1700015E05Rik|AL023058|C77895|CaBP5|P5|Txndc7	protein disulfide isomerase associated 6	protein-coding
unique_peak2-33738-19-38--0.882714892200562-1.37991291380345	chr11	116198351	116200021	+	0	NA	3' UTR (NM_027258, exon 19 of 19)	3' UTR (NM_027258, exon 19 of 19)	-2518	NM_008240	15223	Mm.378938	NM_008240	ENSMUSG00000034227	Foxj1	FKHL-13|HFH-4|Hfh4	forkhead box J1	protein-coding
common_peak2-22217-14-23--0.685746340363512-0.669502273696327	chr12	112722227	112722948	+	0	NA	TTS (NM_001033248)	TTS (NM_001033248)	1447	NM_001033248	212539	Mm.81916	NM_001033248	ENSMUSG00000010529	Gm266	-	predicted gene 266	protein-coding
common_peak2-28106-40-78--0.644805065426005-1.53728479856666	chr4	88937689	88938962	+	0	NA	intron (NM_009877, intron 1 of 2)	intron (NM_009877, intron 1 of 2)	2198	NM_009877	12578	Mm.4733	NM_009877	ENSMUSG00000044303	Cdkn2a	ARF-INK4a|Arf|INK4a-ARF|Ink4a/Arf|MTS1|Pctr1|p16|p16(INK4a)|p16INK4a|p19<ARF>|p19ARF	cyclin-dependent kinase inhibitor 2A	protein-coding
common_peak2-23705-27-21-0.532114332257938-0.800403172662453	chr15	89076080	89076759	+	0	NA	intron (NM_026813, intron 3 of 24)	intron (NM_026813, intron 3 of 24)	34429	NM_027805	71474	Mm.184055	NM_026813	ENSMUSG00000036561	Ppp6r2	1110033O10Rik|8430411H09Rik|B230107H12Rik|Pp6r2|Saps2	protein phosphatase 6, regulatory subunit 2	protein-coding
unique_peak2-37113-2-13--2.72480917832092-2.79529063155376	chr4	6190818	6191527	+	0	NA	Intergenic	Intergenic	11606	NM_007824	13122	Mm.57029	NM_007824	ENSMUSG00000028240	Cyp7a1	-	cytochrome P450, family 7, subfamily a, polypeptide 1	protein-coding
unique_peak1-3016-10-7-0.356415345008769-1.12966497611638	chr17	87459616	87460000	+	0	NA	Intergenic	RMER19B|LTR|ERVK	34907	NM_019936	56724	Mm.109329	NM_019936	ENSMUSG00000024146	Cript	1200020A08Rik|AA589469	cysteine-rich PDZ-binding protein	protein-coding
common_peak1-12879-29-40--0.245261924002973-0.373466121463214	chr18	77773553	77774593	+	0	NA	intron (NM_001164504, intron 1 of 7)	intron (NM_001164504, intron 1 of 7)	29802	NM_001164504	225743	Mm.23293	NM_001164504	ENSMUSG00000025427	Rnf165	2900024M11Rik|AI427432|Ark2c|G630064H08Rik|Gm96	ring finger protein 165	protein-coding
common_peak1-13294-20-10-1.0286431659539-1.30248952876293	chr19	38593787	38594699	+	0	NA	Intergenic	Intergenic	-4444	NM_019588	74055	Mm.34031	NM_019588	ENSMUSG00000024998	Plce1	4933403A21Rik|PLCepsilon|Plce|mKIAA1516	phospholipase C, epsilon 1	protein-coding
unique_peak2-35003-5-6--0.511735258063458-0.947717972411649	chr15	99867726	99868105	+	0	NA	Intergenic	Intergenic	-1180	NM_001159361	239667	Mm.243658	NM_172819	ENSMUSG00000023026	Dip2b	4932422C22|AI317237|AI854602|mKIAA1463	DIP2 disco-interacting protein 2 homolog B (Drosophila)	protein-coding
common_peak2-27160-15-5-1.4272022498345-1.61682445937017	chr3	30879179	30879584	+	0	NA	Intergenic	Intergenic	-11044	NM_001165956	241915	Mm.233173	NM_153421	ENSMUSG00000037652	Phc3	E030046K01Rik|Edr3|Hph3	polyhomeotic-like 3 (Drosophila)	protein-coding
common_peak1-9750-12-15--0.351224014912361-0.332077462497413	chr12	51970770	51971463	+	0	NA	Intergenic	Lx|LINE|L1	-220906	NM_008858	18760	Mm.133719	NM_008858	ENSMUSG00000002688	Prkd1	PKD|PKD1|Pkcm|Prkcm	protein kinase D1	protein-coding
unique_peak2-39808-4-10--1.48289213249054-1.5150158574804	chrX	33842830	33843369	+	0	NA	Intergenic	ORR1A4-int|LTR|MaLR	-25305	NM_028894	74365	Mm.327654	NM_028894		Lonrf3	4932412G04Rik|5730439E01Rik|A830039N02Rik|AU023707|Rnf127	LON peptidase N-terminal domain and ring finger 3	protein-coding
unique_peak1-641-12-6-0.841421063030034-1.58711810488664	chr10	43310818	43311516	+	0	NA	Intergenic	Intergenic	-2066	NR_033558	414125	Mm.244305	NR_033558	ENSMUSG00000075184	F830002L21Rik	F930017D23Rik	RIKEN cDNA F830002L21 gene	ncRNA
unique_peak1-3515-14-4-1.57728806547028-2.4322161449009	chr19	16328327	16328929	+	0	NA	intron (NM_008139, intron 2 of 6)	intron (NM_008139, intron 2 of 6)	60866	NR_105832	102465218		NR_105832	miRBase:MI0021942	Mir496b	mmu-mir-496b	microRNA mir-496b	ncRNA
common_peak1-9786-19-20-0.0103699038829257-0.306326795069978	chr12	59039891	59040547	+	0	NA	Intergenic	L1Md_T|LINE|L1	-272572	NM_009216	20605	Mm.278336	NM_009216		Sstr1	SRIF-2|SS-1-R|SS1-R|SS1R|Smstr-1|Smstr1|sst1	somatostatin receptor 1	protein-coding
unique_peak2-34729-8-29--1.90166817766095-3.04993787975775	chr15	37791487	37792462	+	0	NA	Intergenic	L1Md_T|LINE|L1	-69791	NM_134094	52589	Mm.283370	NM_134094	ENSMUSG00000051359	Ncald	AI848120|D030020D09Rik|D15Ertd412e	neurocalcin delta	protein-coding
common_peak2-21601-14-14--0.00767443525087419-0.308519316180257	chr11	99126230	99126928	+	0	NA	Intergenic	Intergenic	19973	NM_029393	75706	Mm.46378	NM_029393	ENSMUSG00000020913	Krt24	2310058N18Rik|2310075C18Rik	keratin 24	protein-coding
common_peak2-28067-27-19-0.669617856007873-1.02859851787301	chr4	63558329	63559090	+	0	NA	Intergenic	Intergenic	-36391	NM_009403	21949	Mm.4664	NM_009403		Tnfsf8	CD153|CD30LG|Cd30l	tumor necrosis factor (ligand) superfamily, member 8	protein-coding
common_peak1-13660-15-19--0.309763344331706-0.356936432242222	chr2	27010101	27010764	+	0	NA	intron (NR_040524, intron 5 of 6)	intron (NR_040524, intron 5 of 6)	7791	NR_040524	329371	Mm.247664	NR_040524	ENSMUSG00000085008	Dbhos	6430548G04|Gm13399|OTTMUSG00000011846	dopamine beta hydroxylase, opposite strand	ncRNA
common_peak2-31631-32-37-0.0311645057760748-0.312460117298692	chr8	123477656	123478614	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	128797	NR_045471	68790	Mm.246916	NR_045471	ENSMUSG00000097336	Fendrr	1110050K14Rik|linc-Foxf1a	Foxf1 adjacent non-coding developmental regulatory RNA	ncRNA
common_peak1-14009-20-15-0.488074784591193-0.590343908676236	chr2	109403815	109404547	+	0	NA	Intergenic	Intergenic	-110676	NM_007540	12064	Mm.1442	NM_007540	ENSMUSG00000048482	Bdnf	-	brain derived neurotrophic factor	protein-coding
common_peak1-13898-74-111--0.0914683450789964-0.337225858145287	chr2	77945294	77946676	+	0	NA	intron (NR_108098, intron 2 of 6)	intron (NR_108098, intron 2 of 6)	56751	NR_108098	78158	Mm.78473	NR_108098	ENSMUSG00000085431	4930440I19Rik	-	RIKEN cDNA 4930440I19 gene	ncRNA
common_peak1-15094-84-149--0.293884631606855-0.886134329387036	chr3	130059869	130061142	+	0	NA	intron (NM_029838, intron 2 of 37)	intron (NM_029838, intron 2 of 37)	176742	NM_001244952	77018	Mm.91728	NM_029838	ENSMUSG00000058897	Col25a1	2700062B08Rik|CLAC-P	collagen, type XXV, alpha 1	protein-coding
unique_peak2-36585-2-5--1.50241675698448-1.08602067057793	chr2	175470006	175470442	+	0	NA	Intergenic	Intergenic	-65428	NR_040256	626877	Mm.490744	NR_040256		Gm14405	OTTMUSG00000016573	predicted gene 14405	pseudo
common_peak2-27559-11-20--0.883623838527147-0.876666802405043	chr3	96727636	96728305	+	0	NA	intron (NM_008123, intron 1 of 1)	B3|SINE|B2	2004	NM_008123	14616	Mm.258183	NM_008123		Gja8	Aey5|Cnx50|Cx50|Lop10	gap junction protein, alpha 8	protein-coding
common_peak2-26159-76-113--0.0709456283014598-0.316681094180467	chr2	18063691	18065360	+	0	NA	intron (NR_045538, intron 8 of 22)	intron (NR_045538, intron 8 of 22)	78313	NM_001252561	17354	Mm.209175	NM_010804	ENSMUSG00000026743	Mllt10	Af10|B130021D15Rik|D630001B22Rik|mKIAA4140	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	protein-coding
common_peak1-19046-11-9-0.186765489364251-0.344532117358383	chr9	65549585	65550099	+	0	NA	intron (NM_172536, intron 5 of 9)	intron (NM_172536, intron 5 of 9)	25487	NM_001301307	18247	Mm.116749	NM_010952	ENSMUSG00000040652	Oaz2	AZ-2|AZ2|Oaz2-ps|Sez15	ornithine decarboxylase antizyme 2	protein-coding
unique_peak1-4580-13-1-2.77847203063777-3.64038867156802	chr3	57342193	57342894	+	0	NA	intron (NM_133784, intron 2 of 6)	RMER10B|LTR|ERVL	37255	NM_133784	97064	Mm.405029	NM_133784	ENSMUSG00000027803	Wwtr1	2310058J06Rik|2610021I22Rik|C78399|Taz	WW domain containing transcription regulator 1	protein-coding
common_peak2-22504-15-9-0.690236655668294-0.732381977911291	chr13	52061346	52061851	+	0	NA	Intergenic	Intergenic	119554	NM_011817	23882	Mm.281298	NM_011817	ENSMUSG00000021453	Gadd45g	AI327420|C86281|CR6|DDIT2|OIG37	growth arrest and DNA-damage-inducible 45 gamma	protein-coding
common_peak2-30923-8-11--0.579740082773585-1.14218153353838	chr7	144939726	144940425	+	0	NA	Intergenic	PB1D10|SINE|Alu	310718	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
common_peak2-26788-10-7-0.356415345008769-1.12966497611638	chr2	148014077	148014502	+	0	NA	Intergenic	B4A|SINE|B4	-141584	NM_010446	15376	Mm.938	NM_010446	ENSMUSG00000037025	Foxa2	HNF3-beta|HNF3beta|Hnf-3b|Hnf3b|Tcf-3b|Tcf3b	forkhead box A2	protein-coding
common_peak1-10949-10-23--1.22854715571239-1.44380006500971	chr15	25577394	25577932	+	0	NA	intron (NM_019472, intron 1 of 40)	intron (NM_019472, intron 1 of 40)	25358	NM_019472	17909	Mm.60590	NM_019472	ENSMUSG00000022272	Myo10	AW048724|D15Ertd600e|mKIAA0799	myosin X	protein-coding
common_peak1-17703-20-68--1.62044967218698-5.65580879799568	chr7	75455426	75456297	+	0	NA	intron (NM_001013811, intron 3 of 8)	intron (NM_001013811, intron 3 of 8)	-34381	NR_040340	100504026	Mm.426764	NR_040340	ENSMUSG00000086628	Gm16157	OTTMUSG00000031023	predicted gene 16157	ncRNA
unique_peak2-34276-6-18--1.68252940306328-1.66449268468235	chr13	67728453	67729130	+	0	NA	intron (NM_183146, intron 1 of 3)	L1_Mur2|LINE|L1	9899	NM_183146	212281	Mm.342918	NM_183146	ENSMUSG00000021510	A530054K11Rik	Rslcan3	RIKEN cDNA A530054K11 gene	protein-coding
unique_peak2-38804-7-18--1.4488366831454-1.38887104242188	chr7	132813198	132814067	+	0	NA	intron (NM_207239, intron 13 of 36)	intron (NM_207239, intron 13 of 36)	37570	NM_207239	233863	Mm.294173	NM_207239	ENSMUSG00000032777	Gtf3c1	-	general transcription factor III C 1	protein-coding
common_peak2-28984-12-8-0.478850983645327-0.562038191119709	chr5	105792818	105793272	+	0	NA	Intergenic	ETnERV3-int|LTR|ERVK	-17554	NM_001039647	634650	Mm.458435	NM_001039647	ENSMUSG00000092021	Gbp11	EG634650|Gm7141	guanylate binding protein 11	protein-coding
common_peak2-27921-26-35--0.24202590928385-0.384630725886657	chr4	11321549	11322803	+	0	NA	Intergenic	B4A|SINE|B4	-8246	NM_194055	207920	Mm.387719	NM_194055	ENSMUSG00000040728	Esrp1	2210008M09Rik|A630065D16|BC031468|Rbm35a	epithelial splicing regulatory protein 1	protein-coding
unique_peak2-32552-2-6--1.72480917832092-1.26211192963361	chr1	72599804	72600170	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-16849	NM_001045533	381270	Mm.337023	NM_001045533	ENSMUSG00000039372	March4	BC056494|mKIAA1399	membrane-associated ring finger (C3HC4) 4	protein-coding
unique_peak1-4457-8-1-2.00522241794757-2.05605744720049	chr2	174342990	174343476	+	0	NA	Intergenic	RLTR22_Mus|LTR|ERVK	-44791	NM_025531	66390	Mm.182294	NM_025531	ENSMUSG00000016257	Slmo2	2310042G06Rik|AA407013	slowmo homolog 2 (Drosophila)	protein-coding
common_peak1-18650-18-19--0.00900894365901106-0.306598483909153	chr8	111725037	111725738	+	0	NA	Intergenic	Intergenic	139421	NR_002928	384864	Mm.390083	NR_002928		Gm1943	-	WD repeat domain 70 pseudogene	pseudo
common_peak1-10284-12-9-0.326847890200276-0.459837087125828	chr13	62652689	62653264	+	0	NA	intron (NM_175252, intron 1 of 6)	intron (NM_175252, intron 1 of 6)	6983	NM_175252	77117	Mm.470091	NM_175252		Zfp934	6720457D02Rik	zinc finger protein 934	protein-coding
common_peak1-16540-12-42--1.77748876961446-3.79546561170022	chr5	143314874	143315557	+	0	NA	intron (NM_001122730, intron 16 of 18)	intron (NM_001122730, intron 16 of 18)	-25981	NM_009362	21784	Mm.2854	NM_009362	ENSMUSG00000024032	Tff1	Bcei|PS2	trefoil factor 1	protein-coding
common_peak1-10700-14-14--0.00767443525087419-0.308519316180257	chr14	57423572	57424286	+	0	NA	intron (NM_144842, intron 2 of 7)	intron (NM_144842, intron 2 of 7)	6372	NM_001253753	219105	Mm.473172	NM_144842	ENSMUSG00000040123	Zmym5	9830124H08Rik	zinc finger, MYM-type 5	protein-coding
unique_peak2-39521-6-19--1.75652998450706-1.84350559086818	chr9	65409194	65409856	+	0	NA	intron (NM_153119, intron 3 of 5)	intron (NM_153119, intron 3 of 5)	18369	NM_153119	102595	Mm.247303	NM_153119		Plekho2	AI840980|Plekhq1	pleckstrin homology domain containing, family O member 2	protein-coding
common_peak2-25717-37-42-0.0997283167837208-0.340524918943711	chr19	22915956	22917345	+	0	NA	intron (NM_177341, intron 8 of 26)	intron (NM_177341, intron 8 of 26)	91555	NR_029591	387200		NR_029591		Mir204	Mirn204|mmu-mir-204	microRNA 204	ncRNA
common_peak1-10399-16-13-0.310908720210457-0.417187467413082	chr13	97240339	97241119	+	0	NA	intron (NM_001042714, intron 1 of 13)	intron (NM_001042714, intron 1 of 13)	386	NM_001042714	271144	Mm.470057	NM_001042714	ENSMUSG00000047117	Ankdd1b	9330128J19Rik	ankyrin repeat and death domain containing 1B	protein-coding
unique_peak1-369-27-0-4.99154595089524-NA	chr1	143093664	143094657	+	0	NA	Intergenic	L1Md_T|LINE|L1	-541181	NR_040604	75910	Mm.483845	NR_040604		4930590L20Rik	-	RIKEN cDNA 4930590L20 gene	ncRNA
common_peak1-14352-69-66-0.52905325680096-1.58909774063684	chr2	165856825	165858667	+	0	NA	intron (NM_008679, intron 1 of 22)	B1F|SINE|Alu	39609	NM_008679	17979	Mm.469663	NM_008679	ENSMUSG00000027678	Ncoa3	2010305B15Rik|AW321064|Actr|Aib1|KAT13B|Rac3|Src3|Tram-1|Tram1|bHLHe42|p/Cip|pCip	nuclear receptor coactivator 3	protein-coding
unique_peak2-34728-4-8--1.19338551529556-1.21878474469819	chr15	37755786	37756354	+	0	NA	Intergenic	RLTR9A|LTR|ERVK	-33887	NM_134094	52589	Mm.283370	NM_134094	ENSMUSG00000051359	Ncald	AI848120|D030020D09Rik|D15Ertd412e	neurocalcin delta	protein-coding
unique_peak1-6956-9-1-2.18961340640422-2.31132995230379	chr8	111779828	111780284	+	0	NA	Intergenic	LTR16A1|LTR|ERVL	84752	NR_002928	384864	Mm.390083	NR_002928		Gm1943	-	WD repeat domain 70 pseudogene	pseudo
unique_peak1-429-14-4-1.57728806547028-2.4322161449009	chr1	162179602	162180271	+	0	NA	intron (NM_001038621, intron 3 of 8)	intron (NM_001038621, intron 3 of 8)	-36913	NM_009786	12301	Mm.10702	NM_009786	ENSMUSG00000014226	Cacybp	SIP	calcyclin binding protein	protein-coding
unique_peak1-6457-8-1-2.00522241794757-2.05605744720049	chr7	100984799	100985302	+	0	NA	Intergenic	(GA)n|Simple_repeat|Simple_repeat	756661	NM_021427	58238	Mm.113787	NM_021427		Fam181b	A830059I20Rik|AB041569	family with sequence similarity 181, member B	protein-coding
common_peak2-21223-86-108-0.207451469255427-0.601992624465622	chr11	62550134	62551692	+	0	NA	Intergenic	L1VL2|LINE|L1	-8318	NM_133208	170740	Mm.339982	NM_133208		Zfp287	B230333C16Rik|SKAT-2|Skat2|Znf287|mszf16|mszf74	zinc finger protein 287	protein-coding
common_peak2-19680-39-62--0.361518676580763-0.632401539335832	chr1	58392927	58394013	+	0	NA	exon (NM_001008419, exon 24 of 36)	exon (NM_001008419, exon 24 of 36)	-56510	NM_025824	66882	Mm.21848	NM_025824	ENSMUSG00000051223	Bzw1	1200015E15Rik|mKIAA0005	basic leucine zipper and W2 domains 1	protein-coding
common_peak1-11756-98-164--0.164553520815265-0.502916947619989	chr16	37867581	37869564	+	0	NA	promoter-TSS (NM_177093)	promoter-TSS (NM_177093)	86	NM_177093	320184	Mm.390882	NM_177093	ENSMUSG00000034158	Lrrc58	1810012N18Rik|C330018J07Rik	leucine rich repeat containing 58	protein-coding
common_peak1-18262-20-15-0.488074784591193-0.590343908676236	chr8	34621919	34622854	+	0	NA	Intergenic	BGLII_B|LTR|ERVK	27603	NR_033589	628431	Mm.376526	NR_033589		Hmgb1-rs17	Hmg1-rs17	high mobility group box 1, related sequence 17	pseudo
common_peak1-12412-17-11-0.633333837483882-0.769930178837768	chr17	72961378	72962237	+	0	NA	Intergenic	MLT1F|LTR|MaLR	-8160	NM_007439	11682	Mm.311854	NM_007439	ENSMUSG00000055471	Alk	CD246|Tcrz	anaplastic lymphoma kinase	protein-coding
unique_peak1-3488-9-4-0.867685311516858-1.36011389749466	chr19	10738685	10739235	+	0	NA	exon (NM_027913, exon 20 of 20)	exon (NM_027913, exon 20 of 20)	13601	NM_021453	58803	Mm.34037	NM_021453	ENSMUSG00000024738	Pga5	1110035E17Rik|Pepf	pepsinogen 5, group I	protein-coding
common_peak1-13330-19-12-0.702247608520594-0.840839978588874	chr19	43603651	43604279	+	0	NA	Intergenic	Intergenic	-4870	NM_010324	14718	Mm.19039	NM_010324	ENSMUSG00000025190	Got1	AI789014|Got-1|cAspAT|cCAT	glutamate oxaloacetate transaminase 1, soluble	protein-coding
unique_peak2-33424-5-7--0.704380336005853-1.01466476204226	chr11	60219152	60219637	+	0	NA	intron (NM_145427, intron 4 of 7)	intron (NM_145427, intron 4 of 7)	11207	NM_145427	246782	Mm.41651	NM_145427	ENSMUSG00000042709	Atpaf2	ATP12|ATP12p	ATP synthase mitochondrial F1 complex assembly factor 2	protein-coding
unique_peak2-36679-1-6--2.43441193227435-1.56314192529759	chr3	31056280	31056783	+	0	NA	intron (NM_008770, intron 2 of 2)	intron (NM_008770, intron 2 of 2)	7689	NM_008770	18417	Mm.4425	NM_008770	ENSMUSG00000037625	Cldn11	Claudin-11|Claudin11|Osp|Otm	claudin 11	protein-coding
common_peak2-30877-17-21--0.24113528043226-0.322753776620787	chr7	141172162	141172783	+	0	NA	intron (NM_007400, intron 6 of 22)	intron (NM_007400, intron 6 of 22)	-198004	NM_001286031	101437	Mm.199223	NM_133941	ENSMUSG00000030986	Dhx32	3110079L04Rik|4732469F02Rik|AA408140|Ddx32	DEAH (Asp-Glu-Ala-His) box polypeptide 32	protein-coding
common_peak2-22220-12-7-0.648775985087639-0.697979855752659	chr12	112941896	112942392	+	0	NA	Intergenic	Intergenic	9323	NM_027404	70369	Mm.44239	NM_027404	ENSMUSG00000049792	Bag5	1600025G07Rik|4930405J06Rik	BCL2-associated athanogene 5	protein-coding
unique_peak1-4278-17-2-2.63333383748388-3.75443312462699	chr2	137191897	137192819	+	0	NA	Intergenic	L1Md_T|LINE|L1	-250102	NM_013822	16449	Mm.22398	NM_013822	ENSMUSG00000027276	Jag1	ABE2|Gsfabe2|Htu|Ozz|Ser-1	jagged 1	protein-coding
common_peak2-20383-12-7-0.648775985087639-0.697979855752659	chr10	18876113	18876542	+	0	NA	intron (NR_038021, intron 1 of 3)	intron (NR_038021, intron 1 of 3)	-10717	NR_038022	100504265	Mm.383417	NR_038021		Gm20139	-	predicted gene, 20139	ncRNA
common_peak1-9449-65-78-0.188385191300024-0.487314796664552	chr11	103093974	103095701	+	0	NA	intron (NM_016896, intron 6 of 15)	intron (NM_016896, intron 6 of 15)	-15091	NM_177801	328019	Mm.189646	NM_177801	ENSMUSG00000044787	Spata32	4933400C05Rik|VAD1.2	spermatogenesis associated 32	protein-coding
common_peak2-29655-69-106--0.146324539142414-0.387703360961311	chr6	71271380	71272832	+	0	NA	promoter-TSS (NM_009858)	promoter-TSS (NM_009858)	-700	NM_009858	12526	Mm.333148	NM_009858	ENSMUSG00000053044	Cd8b1	Cd8b|Ly-3|Ly-C|Lyt-3	CD8 antigen, beta chain 1	protein-coding
common_peak2-24311-9-14--0.717277189204299-0.53895475198017	chr17	40877602	40878214	+	0	NA	Intergenic	Intergenic	13839	NM_001038500	619517	Mm.391018	NM_001038500	ENSMUSG00000073396	Esp1	EG619517|Gm6084	exocrine gland secreted peptide 1	protein-coding
unique_peak2-38265-0-20--5.23244835325297-4.8766546284749	chr6	125876843	125877183	+	0	NA	intron (NM_153589, intron 15 of 25)	intron (NM_153589, intron 15 of 25)	236576	NM_153589	243634	Mm.333398	NM_153589	ENSMUSG00000038115	Ano2	BC033409|Tmem16b	anoctamin 2	protein-coding
common_peak2-28684-12-13--0.158578936969966-0.301029995663979	chr5	32746256	32746768	+	0	NA	Intergenic	Intergenic	-14831	NM_172707	19046	Mm.241931	NM_172707		Ppp1cb	1200010B19	protein phosphatase 1, catalytic subunit, beta isoform	protein-coding
common_peak1-13849-49-66--0.0598053674325882-0.307711712824847	chr2	60961985	60963872	+	0	NA	Intergenic	Intergenic	-149720	NR_045335	100038493	Mm.388076	NR_045335	ENSMUSG00000075325	Gm13582	ENSMUSG00000075325|OTTMUSG00000012844	predicted gene 13582	ncRNA
unique_peak2-37724-3-5--0.998945590680433-0.96108193396963	chr5	105866898	105867288	+	0	NA	intron (NM_001033550, intron 1 of 4)	intron (NM_001033550, intron 1 of 4)	22299	NM_001033550	433926	Mm.439781	NM_001033550	ENSMUSG00000070639	Lrrc8b	R75581|Ta-lrrp|mKIAA0231	leucine rich repeat containing 8 family, member B	protein-coding
unique_peak1-3287-10-3-1.35641534500877-1.75805390616669	chr18	74987950	74988484	+	0	NA	Intergenic	Intergenic	49351	NM_177470	52538	Mm.245724	NM_177470	ENSMUSG00000036880	Acaa2	0610011L04Rik|AI255831|AI265397|D18Ertd240e	acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase)	protein-coding
common_peak1-9959-17-17-0.0483713367627256-0.325169893479371	chr12	111966510	111967243	+	0	NA	Intergenic	Lx5|LINE|L1	-9283	NM_027149	69641	Mm.491226	NM_027149	ENSMUSG00000037957	Wdr20	2310040A13Rik|AI549910|Wdr20a	WD repeat domain 20	protein-coding
unique_peak2-35506-11-23--1.07626891646954-1.24082643394777	chr17	46888888	46890028	+	0	NA	promoter-TSS (NM_028065)	promoter-TSS (NM_028065)	-297	NM_028065	72029	Mm.240325	NM_028065	ENSMUSG00000023973	Cnpy3	1600025D17Rik|2410050O22Rik|AI413153|CAG4A|ERDA5|PRAT4A|Tnrc5	canopy 3 homolog (zebrafish)	protein-coding
common_peak2-27630-24-38--0.492192316094532-0.631311512744354	chr3	105958762	105959355	+	0	NA	intron (NM_009892, intron 5 of 10)	intron (NM_009892, intron 5 of 10)	11424	NM_009892	12655	Mm.387173	NM_009892	ENSMUSG00000040809	Chil3	AI505981|Chi3l3|ECF-L|Ym1	chitinase-like 3	protein-coding
unique_peak2-33107-5-4--0.0263084308932156-0.909929411522249	chr10	80941012	80941409	+	0	NA	intron (NM_176954, intron 1 of 11)	MIR|SINE|MIR	4244	NM_176954	319586	Mm.152689	NM_176954	ENSMUSG00000034818	Celf5	4930565A21Rik|Brunol5	CUGBP, Elav-like family member 5	protein-coding
common_peak1-9114-21-15-0.569489265266236-0.756118839439552	chr11	72847336	72848545	+	0	NA	intron (NM_018883, intron 10 of 15)	Charlie12|DNA|MER1_type	-13429	NM_025818	66874	Mm.41903	NM_025818		1200014J11Rik	C130061O14Rik|C78393	RIKEN cDNA 1200014J11 gene	protein-coding
common_peak1-8165-12-9-0.326847890200276-0.459837087125828	chr1	195017039	195017565	+	0	NA	intron (NM_153137, intron 8 of 15)	intron (NM_153137, intron 8 of 15)	10438	NM_153137	215243	Mm.261259	NM_153137	ENSMUSG00000037318	Traf3ip3	6030423D04Rik|AI115021|T3jam	TRAF3 interacting protein 3	protein-coding
common_peak1-11858-43-35-0.612638184081391-1.27423323032613	chr16	91969789	91971373	+	0	NA	Intergenic	Intergenic	-38706	NM_138597	28080	Mm.41	NM_138597	ENSMUSG00000022956	Atp5o	ATPO|D12Wsu28e|OSCP	ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	protein-coding
common_peak1-17373-28-29-0.146068524212944-0.357106932979091	chr7	66600729	66602001	+	0	NA	Intergenic	Intergenic	-21846	NR_015479	330544	Mm.9002	NR_015479		C230091D08Rik	-	RIKEN cDNA C230091D08 gene	ncRNA
unique_peak1-3977-24-9-1.47128180788035-2.52428350728854	chr2	32834413	32835483	+	0	NA	intron (NM_019488, intron 4 of 9)	intron (NM_019488, intron 4 of 9)	2628	NM_019488	56017	Mm.305754	NM_019488	ENSMUSG00000026791	Slc2a8	D2Ertd44e|GLUT8|GlutX1	solute carrier family 2, (facilitated glucose transporter), member 8	protein-coding
common_peak2-27120-128-235--0.217637047283766-0.809151025932237	chr3	16182998	16184166	+	0	NA	Intergenic	Lx5|LINE|L1	100399	NM_001145919	229096	Mm.23834	NM_172677	ENSMUSG00000047213	Ythdf3	9130022A11Rik	YTH domain family 3	protein-coding
common_peak2-21089-61-61-0.428553019362465-1.03375211243225	chr11	51583942	51585389	+	0	NA	intron (NM_025535, intron 1 of 6)	intron (NM_025535, intron 1 of 6)	7500	NM_025535	66397	Mm.196592	NM_025535	ENSMUSG00000020386	Sar1b	2310075M17Rik|2900019I22Rik|CMRD|Sara1b|Sara2|Sarb	SAR1 gene homolog B (S. cerevisiae)	protein-coding
unique_peak1-785-12-8-0.478850983645327-0.562038191119709	chr11	54804336	54804977	+	0	NA	intron (NM_013472, intron 20 of 25)	intron (NM_013472, intron 20 of 25)	-28214	NM_001271455	57783	Mm.259671	NM_021327	ENSMUSG00000020400	Tnip1	ABIN|ABIN-1|ABIN1|AU018810|Naf1|Nef|VAN	TNFAIP3 interacting protein 1	protein-coding
common_peak1-11492-36-40-0.121769081549671-0.36493371439645	chr15	102470463	102471395	+	0	NA	Intergenic	(GGAGA)n|Simple_repeat|Simple_repeat	-15077	NM_146065	223922	Mm.208714	NM_146065	ENSMUSG00000099083	Atf7	1110012F10Rik|9430065F09Rik|AI549878|C130020M04Rik	activating transcription factor 7	protein-coding
common_peak2-24431-23-32--0.322626614849373-0.436052471002795	chr17	21008971	21009873	+	0	NA	Intergenic	Intergenic	18193	NM_134196	171230	Mm.222642	NM_134196	ENSMUSG00000050933	Vmn1r231	V1re5|V1re7	vomeronasal 1 receptor 231	protein-coding
common_peak2-19825-2-10--2.37688587490062-2.09384600808989	chr1	89111073	89111586	+	0	NA	intron (NM_001039169, intron 1 of 6)	intron (NM_001039169, intron 1 of 6)	815	NM_001039169	26987	Mm.227183	NM_023314	ENSMUSG00000026254	Eif4e2	2700069E09Rik|AI036339|AV129531|D0H0S6743E|Eif4el3	eukaryotic translation initiation factor 4E member 2	protein-coding
common_peak1-14542-53-92--0.398185798692102-0.890162645893192	chr3	31093477	31094690	+	0	NA	Intergenic	RLTR11A2|LTR|ERVK	45241	NM_008770	18417	Mm.4425	NM_008770	ENSMUSG00000037625	Cldn11	Claudin-11|Claudin11|Osp|Otm	claudin 11	protein-coding
unique_peak2-33218-6-6--0.241956811677302-0.947717972411649	chr10	118747298	118747784	+	0	NA	Intergenic	Intergenic	-70430	NM_027994	71902	Mm.203965	NM_027994	ENSMUSG00000020114	Cand1	2310038O07Rik|6330512O03Rik|AI195005|AI846556|D10Ertd516e|Tp120a|mKIAA0829	cullin associated and neddylation disassociated 1	protein-coding
common_peak1-18024-34-105--1.34585192756193-6.35813774934265	chr7	142094680	142095768	+	0	NA	intron (NM_001143802, intron 2 of 3)	intron (NM_001143802, intron 2 of 3)	34889	NM_001143802	627214	Mm.323610	NM_001143802	ENSMUSG00000073805	Fam196a	B830028B13Rik	family with sequence similarity 196, member A	protein-coding
common_peak1-16983-40-15-1.6589756827511-4.80655783055339	chr6	87236140	87238056	+	0	NA	intron (NM_054041, intron 5 of 17)	intron (NM_054041, intron 5 of 17)	48671	NM_054041	69538	Mm.232525	NM_054041	ENSMUSG00000033420	Antxr1	2310008J16Rik|2810405N18Rik|Antrx1|Tem8	anthrax toxin receptor 1	protein-coding
common_peak2-28704-22-25--0.0531556130536872-0.301029995663976	chr5	34513330	34514077	+	0	NA	Intergenic	L2|LINE|L2	-1528	NM_001289804	272158	Mm.319286	NM_181857	ENSMUSG00000045102	Poln	POL4P	DNA polymerase N	protein-coding
common_peak1-17910-20-32--0.55631933476726-0.705485015404196	chr7	124459529	124460398	+	0	NA	Intergenic	MTE2a|LTR|MaLR	-64530	NM_175645	233781	Mm.461427	NM_175645	ENSMUSG00000030657	Xylt1	8030490L12	xylosyltransferase 1	protein-coding
unique_peak2-39701-6-17--1.60452689106201-1.49151883326343	chr9	111720437	111720929	+	0	NA	Intergenic	Intergenic	-127963	NM_016853	20840	Mm.1414	NM_016853	ENSMUSG00000032502	Stac	-	src homology three (SH3) and cysteine rich domain	protein-coding
common_peak2-27687-23-43--0.737664114128217-1.21996307277154	chr3	117868340	117869523	+	0	NA	Intergenic	Intergenic	-267844	NR_029551	387155		NR_029551		Mir137	Mirn137|mmu-mir-137	microRNA 137	ncRNA
common_peak1-12938-174-176-0.731133393539232-6.80347940441254	chr19	12794595	12798135	+	0	NA	Intergenic	RLTR10D|LTR|ERVK	26085	NM_029550	64697	Mm.218561	NM_029550	ENSMUSG00000024694	Keg1	0610008P16Rik|AI316519|GS4059	kidney expressed gene 1	protein-coding
common_peak2-26834-15-6-1.20480982849805-1.32521814697968	chr2	152821633	152822025	+	0	NA	intron (NM_001083618, intron 10 of 14)	intron (NM_001083618, intron 10 of 14)	19290	NM_178939	68559	Mm.12746	NM_178939	ENSMUSG00000027472	Pdrg1	1110004D19Rik|AU020945|AV006589|Pdrg	p53 and DNA damage regulated 1	protein-coding
common_peak1-12293-22-26--0.107603397076064-0.30528805757448	chr17	46110854	46111731	+	0	NA	Intergenic	Intergenic	50820	NM_001110267	22339	Mm.282184	NM_009505	ENSMUSG00000023951	Vegfa	Vegf|Vpf	vascular endothelial growth factor A	protein-coding
unique_peak2-39048-4-6--0.830815435910851-0.989110657569874	chr8	70538385	70538755	+	0	NA	Intergenic	L1Md_T|LINE|L1	-40097	NM_177698	234353	Mm.32525	NM_027626	ENSMUSG00000030465	Psd3	4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D	pleckstrin and Sec7 domain containing 3	protein-coding
common_peak2-22248-94-121-0.19885223028643-0.601641251915489	chr13	98925583	98926948	+	0	NA	intron (NM_012026, intron 1 of 35)	intron (NM_012026, intron 1 of 35)	49855	NM_012026	110596	Mm.252718	NM_012026	ENSMUSG00000021662	Arhgef28	9230110L08Rik|AI323540|D13Bwg1089e|RIP2|Rgnef|RhoGEF|Rhoip2|p190RhoGEF	Rho guanine nucleotide exchange factor (GEF) 28	protein-coding
common_peak2-22423-34-29-0.475177931392747-0.820829064533854	chr13	37441307	37442461	+	0	NA	intron (NM_010745, intron 1 of 4)	intron (NM_010745, intron 1 of 4)	4670	NM_010745	17084	Mm.2639	NM_010745	ENSMUSG00000021423	Ly86	MD-1|MD1	lymphocyte antigen 86	protein-coding
common_peak2-29176-8-4-0.683294323060208-1.21878474469819	chr5	134678627	134679013	+	0	NA	intron (NM_053266, intron 8 of 15)	intron (NM_053266, intron 8 of 15)	18912	NM_053266	114674	Mm.218744	NM_053266	ENSMUSG00000015942	Gtf2ird2	1700012P16Rik	GTF2I repeat domain containing 2	protein-coding
common_peak2-28824-5-6--0.511735258063458-0.947717972411649	chr5	66041286	66041677	+	0	NA	intron (NM_001081321, intron 13 of 31)	RMER1B|Other|Other	47614	NM_001081321	71521	Mm.278974	NM_027818	ENSMUSG00000029202	Pds5a	9030416H16Rik|E230024D05Rik|mKIAA0648	PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	protein-coding
common_peak1-10460-28-38--0.232443099040786-0.377553616161376	chr13	109260017	109261235	+	0	NA	Intergenic	Intergenic	154095	NM_178683	218581	Mm.32318	NM_178683	ENSMUSG00000021697	Depdc1b	9830132O03|AW260467|XTP1	DEP domain containing 1B	protein-coding
unique_peak2-37862-3-6--1.22133801201688-1.08602067057793	chr5	137079521	137079914	+	0	NA	Intergenic	Intergenic	-36357	NM_001291238	13047	Mm.320317	NM_009986	ENSMUSG00000029705	Cux1	CDP|Cutl1|Cux|Cux-1	cut-like homeobox 1	protein-coding
common_peak2-30630-4-7--1.02346051385325-1.09384600808989	chr7	97129319	97129722	+	0	NA	promoter-TSS (NM_021876)	promoter-TSS (NM_021876)	-34	NM_021876	13626	Mm.380914	NM_021876	ENSMUSG00000030619	Eed	ENSMUSG00000039373|l(7)5Rn|l7Rn5|lusk	embryonic ectoderm development	protein-coding
unique_peak2-32485-0-9--4.16205902536157-2.31132995230379	chr1	36512531	36512976	+	0	NA	Intergenic	Intergenic	-10669	NM_001013374	214895	Mm.287854	NM_001013374	ENSMUSG00000001143	Lman2l	A630028F14Rik|VIP36-like|VIPL	lectin, mannose-binding 2-like	protein-coding
unique_peak2-32490-0-7--3.84013093047421-1.80617997398389	chr1	42885146	42885513	+	0	NA	Intergenic	Intergenic	-22749	NM_023514	69527	Mm.252982	NM_023514	ENSMUSG00000060679	Mrps9	2310002A08Rik|AW322516|Mrp-S9|S9mt|mg637	mitochondrial ribosomal protein S9	protein-coding
unique_peak1-1350-11-4-1.18676548936425-1.68134727924692	chr12	17740217	17740819	+	0	NA	intron (NM_016677, intron 1 of 3)	intron (NM_016677, intron 1 of 3)	42898	NM_016677	53602	Mm.313619	NM_016677	ENSMUSG00000071379	Hpcal1	NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3	hippocalcin-like 1	protein-coding
common_peak1-17901-18-19--0.00900894365901106-0.306598483909153	chr7	122066347	122067159	+	0	NA	Intergenic	Intergenic	-25411	NR_040317	101786	Mm.395157	NR_040317		A730082K24Rik	AU044236	RIKEN cDNA A730082K24 gene	ncRNA
unique_peak1-242-7-2-1.21412832957703-1.45399745587252	chr1	90903873	90904389	+	0	NA	Intergenic	Intergenic	-8557	NR_040471	73475	Mm.491040	NR_040471		1700067G17Rik	-	RIKEN cDNA 1700067G17 gene	ncRNA
common_peak1-12910-20-34--0.641208232353773-0.863762398024911	chr18	84685171	84685951	+	0	NA	intron (NM_001033341, intron 3 of 8)	intron (NM_001033341, intron 3 of 8)	73335	NM_001033341	240476	Mm.329575	NM_001033341	ENSMUSG00000048410	Zfp407	6430585N13Rik|Gm333|Gm334|Gm948|ZNF407	zinc finger protein 407	protein-coding
common_peak1-11112-10-9-0.0344872501214071-1.05503135781948	chr15	62128469	62129062	+	0	NA	Intergenic	Intergenic	-77759	NR_003523	67552	Mm.484027	NM_026230		H2afy3	4933432H23Rik	H2A histone family, member Y3	pseudo
common_peak1-13542-15-23--0.5727977501655-0.575340103425218	chr2	3512946	3513631	+	0	NA	Intergenic	CT-rich|Low_complexity|Low_complexity	82951	NM_177647	227526	Mm.211455	NM_177647	ENSMUSG00000039496	Cdnf	9330140G23|Armetl1	cerebral dopamine neurotrophic factor	protein-coding
common_peak1-18315-14-18--0.348711353085941-0.360333814299795	chr8	47932579	47933267	+	0	NA	TTS (NM_008391)	TTS (NM_008391)	107824	NM_008391	16363	Mm.1149	NM_008391	ENSMUSG00000031627	Irf2	9830146E22Rik|AI646973|Irf-2	interferon regulatory factor 2	protein-coding
common_peak1-8937-9-10--0.269818212233077-1.05503135781948	chr11	53308634	53309127	+	0	NA	Intergenic	Intergenic	-15183	NM_183173	237761	Mm.145208	NM_183173	ENSMUSG00000044352	Sowaha	A830006N08Rik|Ankrd43	sosondowah ankyrin repeat domain family member A	protein-coding
common_peak1-11881-26-28-0.0699180970308904-0.316008636696532	chr16	95777158	95778336	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-25775	NM_133659	13876	Mm.164531	NM_133659	ENSMUSG00000040732	Erg	D030036I24Rik	avian erythroblastosis virus E-26 (v-ets) oncogene related	protein-coding
common_peak2-32371-18-24--0.330937038546373-0.380101753845076	chrX	103623058	103623921	+	0	NA	intron (NM_001007580, intron 22 of 26)	L1MD1|LINE|L1	57079	NM_001007580	333564	Mm.298000	NM_001007580	ENSMUSG00000033737	Fndc3c1	Fndc3c|Gm784	fibronectin type III domain containing 3C1	protein-coding
common_peak1-10347-16-20--0.274053780510699-0.353907621462756	chr13	80882686	80883328	+	0	NA	Intergenic	Intergenic	-139676	NM_001042591	105171	Mm.423137	NM_001042591	ENSMUSG00000074794	Arrdc3	AI450344|mKIAA1376	arrestin domain containing 3	protein-coding
common_peak1-10479-21-20-0.177171842487475-0.380101753845079	chr13	113793734	113794469	+	0	NA	Intergenic	L1Md_F|LINE|L1	10025	NM_001037914	622408	Mm.360976	NM_001037914	ENSMUSG00000074651	Mcidas	EG622408|Gm6320|Idas|Mci|Mcin	multiciliate differentiation and DNA synthesis associated cell cycle protein	protein-coding
unique_peak2-36148-2-9--2.23938235115068-1.87199725847353	chr2	20969684	20970099	+	0	NA	Intergenic	Intergenic	79390	NR_033225	433408	Mm.386941	NR_033225		Gm13375	OTTMUSG00000011664	predicted gene 13375	ncRNA
common_peak1-18744-8-2-1.42025991722641-1.65811743852845	chr8	124863574	124863961	+	0	NA	Intergenic	Intergenic	20879	NM_133202	170732	Mm.154808	NM_133202	ENSMUSG00000039079	Trhr2	TRH-R2	thyrotropin releasing hormone receptor 2	protein-coding
common_peak1-7733-17-31--0.781703661794962-0.932560489028298	chr1	88702119	88702719	+	0	NA	intron (NM_001172157, intron 6 of 21)	L1M2|LINE|L1	102040	NM_001172157	208718	Mm.389152	NM_153530	ENSMUSG00000053333	Dis3l2	4930429A22Rik|8030493P09Rik	DIS3 mitotic control homolog (S. cerevisiae)-like 2	protein-coding
unique_peak2-33505-2-5--1.50241675698448-1.08602067057793	chr11	73320942	73321264	+	0	NA	Intergenic	Lx4B|LINE|L1	9596	NM_146443	258435	Mm.377500	NM_146443	ENSMUSG00000095312	Olfr382	MOR135-14	olfactory receptor 382	protein-coding
common_peak1-15998-7-6--0.00826409175941478-0.97990265578305	chr5	33379149	33379624	+	0	NA	Intergenic	Intergenic	17921	NM_011738	22629	Mm.332314	NM_011738	ENSMUSG00000018965	Ywhah	-	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide	protein-coding
unique_peak2-36117-2-5--1.50241675698448-1.08602067057793	chr2	5012482	5012777	+	0	NA	Intergenic	ID_B1|SINE|B4	-27645	NM_181848	71648	Mm.116942	NM_181848	ENSMUSG00000026672	Optn	4930441O07Rik|FIP2|HYPL|NRP	optineurin	protein-coding
common_peak2-28690-49-66--0.0598053674325882-0.307711712824847	chr5	33335507	33336775	+	0	NA	3' UTR (NM_001170567, exon 43 of 43)	3' UTR (NM_001170567, exon 43 of 43)	-25324	NM_011738	22629	Mm.332314	NM_011738	ENSMUSG00000018965	Ywhah	-	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide	protein-coding
common_peak1-12211-31-37--0.0226888426304619-0.301029995663945	chr17	33954935	33955989	+	0	NA	intron (NM_030697, intron 3 of 10)	intron (NM_030697, intron 3 of 10)	5981	NM_016844	54127	Mm.352374	NM_016844	ENSMUSG00000067288	Rps28	-	ribosomal protein S28	protein-coding
common_peak2-27575-39-86--0.827182248929574-2.5314953918196	chr3	99140667	99141443	+	0	NA	intron (NM_009323, intron 6 of 7)	intron (NM_009323, intron 6 of 7)	83372	NM_009323	21384	Mm.88761	NM_009323	ENSMUSG00000027868	Tbx15	Tbx14|Tbx8|de	T-box 15	protein-coding
common_peak1-11991-15-7-1.01216475055566-1.08658567012551	chr17	12769020	12769698	+	0	NA	Intergenic	B3|SINE|B2	-7696	NM_013667	20518	Mm.17322	NM_013667	ENSMUSG00000040966	Slc22a2	Oct2|Orct2	solute carrier family 22 (organic cation transporter), member 2	protein-coding
common_peak2-30998-10-9-0.0344872501214071-1.05503135781948	chr8	8606278	8606733	+	0	NA	Intergenic	Intergenic	54268	NM_010111	13642	Mm.209813	NM_010111	ENSMUSG00000001300	Efnb2	ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1	ephrin B2	protein-coding
common_peak1-15171-40-49-0.0151194929763738-0.309716464454027	chr3	152143127	152144848	+	0	NA	intron (NM_001081277, intron 11 of 13)	MTD|LTR|MaLR	84339	NM_001287139	108946	Mm.379292	NM_198416	ENSMUSG00000039068	Zzz3	3110065C23Rik|6430567E01Rik|AA408566|AI481057|AW556059|R75514	zinc finger, ZZ domain containing 3	protein-coding
common_peak2-21390-24-22-0.269647946710704-0.457753417732779	chr11	80080377	80081396	+	0	NA	3' UTR (NM_021536, exon 19 of 19)	3' UTR (NM_021536, exon 19 of 19)	-33528	NM_139228	246104	Mm.194148	NM_139228	ENSMUSG00000017692	Rhbdl3	AI847581|Rhbdl4|Rhomr1|Vrho	rhomboid, veinlet-like 3 (Drosophila)	protein-coding
unique_peak1-4231-9-1-2.18961340640422-2.31132995230379	chr2	124167925	124168450	+	0	NA	intron (NM_001290997, intron 3 of 20)	Lx3_Mus|LINE|L1	-120093	NR_040612	75946	Mm.415059	NR_040612	ENSMUSG00000086954	4930583P06Rik	-	RIKEN cDNA 4930583P06 gene	ncRNA
common_peak1-15602-39-31-0.615761246919154-1.18805111968663	chr4	131873361	131874467	+	0	NA	intron (NM_027925, intron 6 of 8)	B1_Mus1|SINE|Alu	7296	NR_028537	100217437		NR_028537		Snord99	MBII-420	small nucleolar RNA, C/D box 99	snoRNA
common_peak2-22088-16-13-0.310908720210457-0.417187467413082	chr12	79089122	79089740	+	0	NA	Intergenic	Intergenic	-238211	NM_172952	268566	Mm.341742	NM_145965	ENSMUSG00000047454	Gphn	5730552E08Rik|AI662856|BC027112|C230040D23|GPH|GPHRYN|geph	gephyrin	protein-coding
common_peak2-29335-12-14--0.25811461052088-0.309074325783021	chr5	148361663	148362033	+	0	NA	Intergenic	L2|LINE|L2	119692	NM_028291	72587	Mm.320469	NM_028291	ENSMUSG00000029647	Pan3	2700050F09Rik|A430027N15Rik|AU014670	PAN3 polyA specific ribonuclease subunit homolog (S. cerevisiae)	protein-coding
unique_peak1-4982-7-0-2.79909083029819-2.40823996531185	chr4	110513287	110513778	+	0	NA	intron (NM_001048189, intron 3 of 12)	intron (NM_001048189, intron 3 of 12)	443229	NM_030231	78933	Mm.435620	NM_030231	ENSMUSG00000061298	Agbl4	4930578N11Rik|4931433A01Rik	ATP/GTP binding protein-like 4	protein-coding
common_peak1-15092-16-14-0.211373046659543-0.364171515310935	chr3	129878292	129878968	+	0	NA	Intergenic	Intergenic	-5133	NM_029838	77018	Mm.91728	NM_029838	ENSMUSG00000058897	Col25a1	2700062B08Rik|CLAC-P	collagen, type XXV, alpha 1	protein-coding
unique_peak1-2768-11-7-0.508693584251613-1.21681515183528	chr17	6079825	6080388	+	0	NA	promoter-TSS (NM_001111017)	promoter-TSS (NM_001111017)	278	NM_181392	66467	Mm.303441	NM_181392	ENSMUSG00000034345	Gtf2h5	2700017P07Rik|2810432H05Rik|D17Wsu155e	general transcription factor IIH, polypeptide 5	protein-coding
unique_peak2-37297-2-8--2.08737925770563-1.65811743852845	chr4	120255491	120255855	+	0	NA	Intergenic	Intergenic	-5677	NM_001101603	667063	Mm.90231	NM_001101603	ENSMUSG00000091297	Gm8439	EG667063|Gm1664	predicted gene 8439	protein-coding
common_peak1-13634-19-31--0.597312673338314-0.721233599456203	chr2	25500721	25501392	+	0	NA	Intergenic	Intergenic	-7582	NM_033145	78076	Mm.196708	NM_033145	ENSMUSG00000036449	Lcn8	9230106L18Rik|EP17|Lcn5|mEP17	lipocalin 8	protein-coding
common_peak2-19611-68-94-0.0001051709673483-0.302178928225441	chr1	34842108	34843738	+	0	NA	Intergenic	PB1D7|SINE|Alu	-15644	NM_183019	226970	Mm.41604	NM_183019	ENSMUSG00000037509	Arhgef4	9330140K16Rik|Asef|ENSMUSG00000070955	Rho guanine nucleotide exchange factor (GEF) 4	protein-coding
common_peak1-13753-12-20--0.743541437691122-0.625923329873571	chr2	33467993	33468579	+	0	NA	intron (NM_010725, intron 2 of 7)	intron (NM_010725, intron 2 of 7)	27745	NM_010725	16917	Mm.39825	NM_010725	ENSMUSG00000038765	Lmx1b	LMX1.1|LMX1.2	LIM homeobox transcription factor 1 beta	protein-coding
common_peak2-21595-13-19--0.543456064249594-0.466170754204149	chr11	98863746	98864296	+	0	NA	intron (NM_011623, intron 24 of 35)	intron (NM_011623, intron 24 of 35)	-19691	NM_178596	353155	Mm.453253	NM_178596	ENSMUSG00000047197	Gjd3	Gja11|Gjc1|cx30.2	gap junction protein, delta 3	protein-coding
unique_peak2-34603-0-7--3.84013093047421-1.80617997398389	chr14	72602531	72602861	+	0	NA	Intergenic	Intergenic	346180	NR_046274	74667	Mm.159286	NR_046274		4930434J06Rik	-	RIKEN cDNA 4930434J06 gene	ncRNA
unique_peak1-1186-23-4-2.39983940962172-4.21583923654667	chr11	101004224	101005288	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-12442	NM_134028	103768	Mm.142348	NM_134028	ENSMUSG00000045007	Tubg2	AI504772|Tubgl	tubulin, gamma 2	protein-coding
common_peak1-12740-18-26--0.441968350935117-0.471456499375593	chr18	56572812	56573636	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-18562	NM_026240	107022	Mm.24356	NM_026240	ENSMUSG00000001700	Gramd3	9030613F08Rik|9130427A09Rik|AW061306|NS3TP2	GRAM domain containing 3	protein-coding
unique_peak1-2147-8-1-2.00522241794757-2.05605744720049	chr15	58865999	58866449	+	0	NA	intron (NM_001146180, intron 3 of 13)	intron (NM_001146180, intron 3 of 13)	47357	NM_001146180	211401	Mm.215481	NM_144800	ENSMUSG00000022353	Mtss1	2310003N14Rik|BC024131|D130001D01Rik|Mim|mKIAA0429	metastasis suppressor 1	protein-coding
common_peak1-19099-63-58-0.555669541708748-1.56901764734008	chr9	72132544	72133982	+	0	NA	intron (NM_146224, intron 1 of 21)	B1_Mus1|SINE|Alu	10557	NM_146224	235469	Mm.242791	NM_146224	ENSMUSG00000038535	Zfp280d	A930005F02Rik|BC027163|Suhw4|ZNF634|Znf280d	zinc finger protein 280D	protein-coding
unique_peak1-4830-8-1-2.00522241794757-2.05605744720049	chr3	146443484	146443984	+	0	NA	intron (NM_011100, intron 1 of 9)	intron (NM_011100, intron 1 of 9)	646	NM_001164200	18749	Mm.16766	NM_011100	ENSMUSG00000005034	Prkacb	Pkacb	protein kinase, cAMP dependent, catalytic, beta	protein-coding
common_peak1-11408-103-111-0.480642823802437-1.95582004222037	chr15	98870922	98872714	+	0	NA	Intergenic	Intergenic	11496	NM_009448	22146	Mm.88212	NM_009448	ENSMUSG00000043091	Tuba1c	M[a]6|Tuba6	tubulin, alpha 1C	protein-coding
common_peak2-20868-18-32--0.731474968130102-0.907815120698057	chr11	99040707	99041616	+	0	NA	Intergenic	GA-rich|Low_complexity|Low_complexity	-24770	NM_007719	12775	Mm.2932	NM_007719	ENSMUSG00000037944	Ccr7	CD197|Cdw197|Cmkbr7|EBI1|Ebi1h	chemokine (C-C motif) receptor 7	protein-coding
unique_peak1-6181-34-8-2.21214352555895-5.80521965470947	chr6	145972746	145973893	+	0	NA	Intergenic	Intergenic	90652	NM_010656	16651	Mm.49689	NM_010656	ENSMUSG00000030255	Sspn	Krag	sarcospan	protein-coding
common_peak2-27931-19-40--0.954864677956397-1.60774463804084	chr4	19708516	19709207	+	0	NA	Intergenic	Intergenic	-37013	NM_028746	74087	Mm.173833	NM_028746	ENSMUSG00000041052	Slc7a13	0610009O04Rik|AGT-1|AGT1|XAT2	solute carrier family 7, (cationic amino acid transporter, y+ system) member 13	protein-coding
unique_peak2-32655-9-13--0.617741515653384-0.459837087125828	chr1	133397405	133398293	+	0	NA	intron (NM_001081011, intron 2 of 22)	intron (NM_001081011, intron 2 of 22)	26089	NM_001081011	14270	Mm.276259	NM_019520	ENSMUSG00000026425	Srgap2	9930124L22Rik|AI448945|FBP2|Fnbp2|srGAP3	SLIT-ROBO Rho GTPase activating protein 2	protein-coding
common_peak1-16702-29-53--0.642597421548357-1.10619710598095	chr6	21949404	21950191	+	0	NA	intron (NM_001081351, intron 1 of 21)	intron (NM_001081351, intron 1 of 21)	13887	NM_001081351	214642	Mm.221404	NM_001081351	ENSMUSG00000062980	Cped1	6720481P07|A430107O13Rik|AI552584	cadherin-like and PC-esterase domain containing 1	protein-coding
common_peak1-9610-22-16-0.559821263837065-0.733541631673787	chr11	120629936	120630835	+	0	NA	Intergenic	B2_Mm2|SINE|B2	15133	NM_009053	19719	Mm.871	NM_009053	ENSMUSG00000025158	Rfng	-	RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase	protein-coding
common_peak2-30113-10-8-0.186490343566457-1.078512453669	chr6	135367995	135368426	+	0	NA	Intergenic	Intergenic	50699	NM_001288627	13730	Mm.182785	NM_010128	ENSMUSG00000030208	Emp1	I-8-09|TMP	epithelial membrane protein 1	protein-coding
common_peak2-21769-11-7-0.508693584251613-1.21681515183528	chr11	116671836	116672206	+	0	NA	intron (NM_026280, intron 3 of 3)	intron (NM_026280, intron 3 of 3)	17339	NM_026280	67622	Mm.64962	NM_026280	ENSMUSG00000020814	Mxra7	1810057P16Rik|E130302J09Rik	matrix-remodelling associated 7	protein-coding
common_peak1-11444-23-22-0.198205548452068-0.373496418836697	chr15	100686947	100687890	+	0	NA	Intergenic	Intergenic	-13658	NM_001077499	20273	Mm.385012	NM_011323	ENSMUSG00000023033	Scn8a	AI853486|C630029C19Rik|NaCh6|Nav1.6|dmu|med|mnd-2|mnd2|nmf2|nmf335|nmf58|nur14|seal	sodium channel, voltage-gated, type VIII, alpha	protein-coding
common_peak1-11065-15-13-0.204809828498052-0.368541233333383	chr15	57854020	57854751	+	0	NA	intron (NM_029418, intron 5 of 5)	intron (NM_029418, intron 5 of 5)	11464	NM_029418	75758	Mm.455792	NM_029418	ENSMUSG00000022362	9130401M01Rik	AI849328	RIKEN cDNA 9130401M01 gene	protein-coding
common_peak2-21786-14-11-0.314253659636488-0.435191258261915	chr11	117842958	117843476	+	0	NA	Intergenic	PB1D7|SINE|Alu	-4954	NM_133757	74451	Mm.28864	NM_133757	ENSMUSG00000017715	Pgs1	2610019F11Rik|4933424M23Rik|SAF	phosphatidylglycerophosphate synthase 1	protein-coding
common_peak1-10438-47-54-0.153481711241888-0.393610822453554	chr13	103773597	103774748	+	0	NA	intron (NM_175171, intron 4 of 28)	intron (NM_175171, intron 4 of 28)	290534	NM_008533	17079	Mm.373974	NM_008533	ENSMUSG00000021624	Cd180	F630107B15|Ly78|RP105	CD180 antigen	protein-coding
common_peak1-15973-38-59--0.335437936309988-0.547023400307267	chr5	31630109	31631111	+	0	NA	TTS (NM_144909)	TTS (NM_144909)	30656	NM_144909	231103	Mm.100043	NM_144909	ENSMUSG00000059434	Gckr	GKRP	glucokinase regulatory protein	protein-coding
common_peak1-18409-9-5-0.604650905683064-1.21398586181642	chr8	72438843	72439351	+	0	NA	intron (NM_001113346, intron 8 of 12)	intron (NM_001113346, intron 8 of 12)	-12640	NM_023312	67184	Mm.21162	NM_023312	ENSMUSG00000036199	Ndufa13	2700054G14Rik|AU022060|CDA016|CGI-39|GRIM-19|Grim19	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13	protein-coding
unique_peak2-35411-5-13--1.51173525806346-1.78669045979184	chr17	33394141	33394761	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	-2361	NM_029952	77652	Mm.460572	NM_029952		Zfp955a	AI842447|Zfp883a	zinc finger protein 955A	protein-coding
unique_peak1-3517-9-6-0.382258484346616-1.11707584880836	chr19	17156761	17157395	+	0	NA	intron (NM_181348, intron 6 of 19)	L3|LINE|CR1	126470	NM_181348	353211	Mm.257354	NM_181348	ENSMUSG00000039126	Prune2	6330414G02Rik|A230083H22Rik|A330102H22Rik|Bmcc1|mKIAA0367	prune homolog 2 (Drosophila)	protein-coding
common_peak2-28993-13-21--0.680959587999529-0.607095980551316	chr5	107987755	107988710	+	0	NA	intron (NM_133248, intron 13 of 18)	intron (NM_133248, intron 13 of 18)	24502	NM_175241	76421	Mm.67037	NM_175241	ENSMUSG00000089798	1700028K03Rik	-	RIKEN cDNA 1700028K03 gene	protein-coding
common_peak2-29944-25-19-0.539921810457743-0.756750750680359	chr6	116634690	116635576	+	0	NA	Intergenic	Intergenic	-11279	NM_178045	213391	Mm.257931	NM_178045	ENSMUSG00000042129	Rassf4	3830411C14Rik|AD037|AI586137	Ras association (RalGDS/AF-6) domain family member 4	protein-coding
common_peak2-23443-42-68--0.366195128910985-0.650659218814807	chr15	63997417	63998670	+	0	NA	exon (NM_001276463, exon 7 of 28)	exon (NM_001276463, exon 7 of 28)	-106033	NM_144846	223601	Mm.246108	NM_144846	ENSMUSG00000022378	Fam49b	0910001A06Rik|AW122079	family with sequence similarity 49, member B	protein-coding
common_peak2-27053-25-30--0.0923464050417691-0.304710633611958	chr2	180710110	180711018	+	0	NA	intron (NM_001177709, intron 7 of 11)	intron (NM_001177709, intron 7 of 11)	8559	NM_001177706	228998	Mm.33765	NM_145760	ENSMUSG00000027575	Arfgap1	AI115377|Arf1gap	ADP-ribosylation factor GTPase activating protein 1	protein-coding
common_peak2-26452-25-69--1.26743311159986-3.95194335281	chr2	71786731	71788401	+	0	NA	Intergenic	Intergenic	-31706	NM_001204167	56508	Mm.196153	NM_019688	ENSMUSG00000049044	Rapgef4	1300003D15Rik|5730402K07Rik|6330581N18Rik|EPAC 2|Epac-2|Epac2|mKIAA4040	Rap guanine nucleotide exchange factor (GEF) 4	protein-coding
common_peak2-20458-16-15-0.118263642268062-0.328191099940264	chr10	42107358	42108012	+	0	NA	intron (NM_145743, intron 7 of 12)	intron (NM_145743, intron 7 of 12)	90686	NM_145743	215951	Mm.89646	NM_145743	ENSMUSG00000038302	Lace1	CG8520	lactation elevated 1	protein-coding
common_peak2-28951-11-8-0.338768582809301-1.14218153353838	chr5	100429774	100430232	+	0	NA	Intergenic	RMER1B|Other|Other	-22046	NM_001077265	11991	Mm.150231	NM_007516		Hnrnpd	Auf1|Hnrpd	heterogeneous nuclear ribonucleoprotein D	protein-coding
unique_peak1-2013-10-0-3.35641534500877-3.31132995230379	chr15	7596789	7597277	+	0	NA	Intergenic	Intergenic	-163015	NM_010275	14573	Mm.4679	NM_010275	ENSMUSG00000022144	Gdnf	AI385739	glial cell line derived neurotrophic factor	protein-coding
unique_peak1-3527-8-2-1.42025991722641-1.65811743852845	chr19	20473316	20473764	+	0	NA	Intergenic	Intergenic	-6238	NR_045817	68994	Mm.261028	NM_183277	ENSMUSG00000094732	1500015L24Rik	-	RIKEN cDNA 1500015L24 gene	ncRNA
common_peak2-23346-11-6-0.701338662194009-1.32595962126035	chr15	39659596	39660008	+	0	NA	intron (NM_001164466, intron 4 of 9)	intron (NM_001164466, intron 4 of 9)	29214	NM_001164466	64705	Mm.275974	NM_022722	ENSMUSG00000022304	Dpys	1200017I10Rik|1300004I01Rik|DHP|DHPase	dihydropyrimidinase	protein-coding
common_peak2-22375-6-6--0.241956811677302-0.947717972411649	chr13	29985661	29986063	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-38405	NM_144536	68916	Mm.212227	NM_144536	ENSMUSG00000006191	Cdkal1	1190005B03Rik|6620401C13Rik	CDK5 regulatory subunit associated protein 1-like 1	protein-coding
common_peak2-25951-15-6-1.20480982849805-1.32521814697968	chr19	47510608	47510990	+	0	NA	intron (NM_001164717, intron 1 of 13)	intron (NM_001164717, intron 1 of 13)	28102	NM_001164717	14218	Mm.127560	NM_008018	ENSMUSG00000053617	Sh3pxd2a	2310014D11Rik|AA589508|AI256723|AI413738|C230050L11|EG329070|Fish|Gm5098|Sh3md1|TSK5|Tks5	SH3 and PX domains 2A	protein-coding
unique_peak1-6909-8-5-0.420259917226415-1.10484139239135	chr8	105566270	105566761	+	0	NA	Intergenic	Intergenic	-257504	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
unique_peak1-5827-19-3-2.40268732666169-3.59864904409227	chr6	72253464	72254415	+	0	NA	promoter-TSS (NM_001282071)	promoter-TSS (NM_001282071)	-665	NM_001282071	20388	Mm.46033	NM_147779	ENSMUSG00000056370	Sftpb	AI562151|SF-B|SP-B|Sftp-3|Sftp3	surfactant associated protein B	protein-coding
common_peak1-15735-12-12--0.0516637330534535-0.309718203022949	chr4	148087536	148088204	+	0	NA	Intergenic	Intergenic	70444	NM_001085505	230909	Mm.332067	NM_001085505	ENSMUSG00000070577	Gm572	b2b1167Clo	predicted gene 572	protein-coding
unique_peak2-34921-7-10--0.660340788339108-1.12966497611638	chr15	85036410	85036910	+	0	NA	intron (NM_010180, intron 1 of 16)	CpG	222	NM_010180	14114	Mm.297992	NM_010180	ENSMUSG00000006369	Fbln1	-	fibulin 1	protein-coding
common_peak1-18666-21-28--0.288491729861336-0.367910579842127	chr8	117258735	117259718	+	0	NA	intron (NM_019573, intron 8 of 8)	(TA)n|Simple_repeat|Simple_repeat	295674	NM_019573	80707	Mm.440420	NM_019573	ENSMUSG00000004637	Wwox	5330426P09Rik|9030416C10Rik|WOX1	WW domain-containing oxidoreductase	protein-coding
unique_peak1-3902-11-2-1.92373108353046-2.32232533660526	chr2	20939286	20939864	+	0	NA	Intergenic	MTD|LTR|MaLR	49074	NR_033225	433408	Mm.386941	NR_033225		Gm13375	OTTMUSG00000011664	predicted gene 13375	ncRNA
common_peak2-26681-12-5-1.06381348436648-1.78669045979184	chr2	124718567	124718834	+	0	NA	Intergenic	Intergenic	-175163	NM_175034	317750	Mm.330538	NM_175034	ENSMUSG00000035183	Slc24a5	F630045L20Rik|JSX|NCKX5|NCX5|Oca6	solute carrier family 24, member 5	protein-coding
common_peak1-16472-44-52-0.0939723800053365-0.350851889851556	chr5	137115185	137116650	+	0	NA	Intergenic	ID_B1|SINE|B4	-53099	NM_021611	59310	Mm.5178	NM_021611	ENSMUSG00000005474	Myl10	1700027I08Rik|Mylc2pl|PLRLC|PLRLC-A|PLRLC-B|PLRLC-C	myosin, light chain 10, regulatory	protein-coding
common_peak1-15761-13-8-0.608547029195456-0.660903317613904	chr4	150837190	150837822	+	0	NA	intron (NM_001081557, intron 4 of 23)	B4A|SINE|B4	398371	NM_001081557	100072	Mm.318846	NM_001081557	ENSMUSG00000014592	Camta1	1810059M14Rik|2310058O09Rik|AI316882|AW987475|mKIAA0833	calmodulin binding transcription activator 1	protein-coding
unique_peak2-35713-7-9--0.522837264589173-1.05908390183068	chr18	33463723	33464227	+	0	NA	Intergenic	Intergenic	-90505	NM_133774	170459	Mm.127058	NM_133774		Stard4	4632419C16Rik|9030213J02Rik|AA517649|AW324468	StAR-related lipid transfer (START) domain containing 4	protein-coding
common_peak1-16160-10-6-0.549060422951165-1.21398586181642	chr5	77375515	77375965	+	0	NA	intron (NM_172146, intron 1 of 10)	intron (NM_172146, intron 1 of 10)	-4696	NM_025939	67054	Mm.182931	NM_025939	ENSMUSG00000029247	Paics	2610511I09Rik|ADE2H1|AIRC|PAIS	phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase	protein-coding
common_peak1-16182-32-29-0.372201423611141-0.621525249893804	chr5	91640848	91641820	+	0	NA	Intergenic	Intergenic	70768	NR_040428	100503265	Mm.125059	NR_040428		Gm19619	-	predicted gene, 19619	ncRNA
common_peak2-29814-57-23-1.68107053935777-6.98355562874783	chr6	91209738	91210728	+	0	NA	intron (NM_007992, intron 9 of 17)	intron (NM_007992, intron 9 of 17)	47475	NM_007992	14115	Mm.249146	NM_007992	ENSMUSG00000064080	Fbln2	5730577E14Rik|FIBL-2	fibulin 2	protein-coding
common_peak2-24752-62-108--0.357432865974841-0.89763279861744	chr17	55877931	55879860	+	0	NA	Intergenic	Lx2B|LINE|L1	-10354	NM_139138	52614	Mm.210497	NM_139138	ENSMUSG00000032915	Emr4	D17Ertd479e|Egf-tm7|Fire|Gpr127	EGF-like module containing, mucin-like, hormone receptor-like sequence 4	protein-coding
unique_peak2-33194-4-10--1.48289213249054-1.5150158574804	chr10	108444585	108445134	+	0	NA	intron (NM_001252341, intron 1 of 11)	intron (NM_001252341, intron 1 of 11)	3172	NM_009306	20979	Mm.289702	NM_009306	ENSMUSG00000035864	Syt1	AW124717|G630098F17Rik|SytI	synaptotagmin I	protein-coding
unique_peak1-4415-10-4-1.03448725012141-1.5150158574804	chr2	167757283	167757861	+	0	NA	promoter-TSS (NM_011201)	promoter-TSS (NM_011201)	-255	NM_011201	19246	Mm.277916	NM_011201	ENSMUSG00000027540	Ptpn1	PTP-1B|PTP-HA2|PTP1B	protein tyrosine phosphatase, non-receptor type 1	protein-coding
common_peak1-13535-95-102-0.461414817840796-1.73139373313495	chr2	167788494	167790887	+	0	NA	intron (NM_011201, intron 2 of 8)	intron (NM_011201, intron 2 of 8)	31863	NM_011201	19246	Mm.277916	NM_011201	ENSMUSG00000027540	Ptpn1	PTP-1B|PTP-HA2|PTP1B	protein tyrosine phosphatase, non-receptor type 1	protein-coding
unique_peak2-35427-3-7--1.41398308995928-1.23214870625617	chr17	34836584	34837041	+	0	NA	intron (NM_031176, intron 16 of 32)	intron (NM_031176, intron 16 of 32)	29332	NM_031176	81877	Mm.290527	NM_031176	ENSMUSG00000033327	Tnxb	Tn-mhc|Tnx	tenascin XB	protein-coding
unique_peak1-3039-14-4-1.57728806547028-2.4322161449009	chr18	4930686	4931393	+	0	NA	Intergenic	Intergenic	-115548	NM_153153	225115	Mm.136791	NM_153153	ENSMUSG00000024236	Svil	AU024053|B430302E16Rik	supervillin	protein-coding
common_peak1-14275-22-14-0.740393509478886-0.983972868822056	chr2	156475403	156476432	+	0	NA	intron (NM_001277187, intron 1 of 11)	intron (NM_001277187, intron 1 of 11)	36484	NM_001277186	228836	Mm.22094	NM_146128	ENSMUSG00000061689	Dlgap4	AI225853|BC024558|DAP-4|DAP4|SAPAP-4|Sapap4|WBP16	discs, large homolog-associated protein 4 (Drosophila)	protein-coding
common_peak1-17666-39-107--1.13912625524431-5.0979441096636	chr7	65370486	65371493	+	0	NA	Intergenic	Intergenic	524446	NM_008071	14402	Mm.8004	NM_008071	ENSMUSG00000033676	Gabrb3	A230092K12Rik|AW049585|Cp1|Gabrb-3|beta3	gamma-aminobutyric acid (GABA) A receptor, subunit beta 3	protein-coding
common_peak2-30916-163-170-0.667271008380134-5.45870355845381	chr7	144746044	144749941	+	0	NA	Intergenic	RLTR28|LTR|ERVL	118635	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
common_peak1-7681-21-37--0.67843824817735-0.907273387067392	chr1	78657887	78658651	+	0	NA	intron (NM_001136226, intron 2 of 3)	B1_Mus1|SINE|Alu	3254	NM_001136226	195434	Mm.276016	NM_001001981	ENSMUSG00000079470	Utp14b	4932411L21Rik|jsd	UTP14, U3 small nucleolar ribonucleoprotein, homolog B (yeast)	protein-coding
common_peak2-24893-19-21--0.0567442919756109-0.301029995663971	chr17	84071100	84071714	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-34096	NM_001171054	116871	Mm.277668	NM_054082	ENSMUSG00000055817	Mta3	1110002J22Rik|mKIAA1266	metastasis associated 3	protein-coding
common_peak2-22907-39-65--0.4286328724393-0.790272552182767	chr14	34673759	34675013	+	0	NA	Intergenic	ORR1B1|LTR|MaLR	-62387	NM_145741	14560	Mm.432071	NM_145741	ENSMUSG00000021943	Gdf10	Bmp3b	growth differentiation factor 10	protein-coding
common_peak2-20777-82-180--0.606582742777471-3.02245271449611	chr10	117844860	117846573	+	0	NA	Intergenic	Intergenic	-32387	NM_008337	15978	Mm.240327	NM_008337	ENSMUSG00000055170	Ifng	IFN-g|Ifg	interferon gamma	protein-coding
unique_peak2-36639-8-8--0.164702583494742-1.00793137938329	chr3	8866318	8866700	+	0	NA	intron (NM_025434, intron 2 of 2)	intron (NM_025434, intron 2 of 2)	57348	NM_025434	66230	Mm.38460	NM_025434	ENSMUSG00000040269	Mrps28	1500012D08Rik|AW061224	mitochondrial ribosomal protein S28	protein-coding
common_peak1-18263-23-17-0.551842503066768-0.713114929964887	chr8	34760743	34761744	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-2467	NM_010344	14782	Mm.283573	NM_010344	ENSMUSG00000031584	Gsr	AI325518|D8Ertd238e|Gr-1|Gr1	glutathione reductase	protein-coding
common_peak1-16100-50-38-0.755538097616704-1.95835867484699	chr5	64864271	64866248	+	0	NA	Intergenic	Intergenic	-2988	NR_045411	77382	Mm.366742	NR_045411		C030018K13Rik	-	RIKEN cDNA C030018K13 gene	ncRNA
unique_peak1-4435-14-2-2.31425365963649-3.28500101358144	chr2	169492760	169493529	+	0	NA	intron (NM_080455, intron 1 of 1)	intron (NM_080455, intron 1 of 1)	33998	NM_080455	228911	Mm.315789	NM_080455	ENSMUSG00000047907	Tshz2	2900073F20Rik|B830045G17|Mtsh2|Sdccag33l|Tsh2|Zfp218|mKIAA4248|teashirt2	teashirt zinc finger family member 2	protein-coding
unique_peak2-38360-11-11--0.0762689164695427-0.301029995663976	chr7	4170883	4171436	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-18197	NM_001081239	232801	Mm.258061	NM_001081239	ENSMUSG00000070873	Lilra5	E030017K20|EG232801|Gm4878|Lilrc1	leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5	protein-coding
common_peak2-31854-71-94-0.0745885703890234-0.34133178638415	chr9	48494818	48495986	+	0	NA	intron (NM_001033324, intron 4 of 6)	intron (NM_001033324, intron 4 of 6)	-82220	NM_010924	18113	Mm.8362	NM_010924	ENSMUSG00000032271	Nnmt	-	nicotinamide N-methyltransferase	protein-coding
common_peak2-20424-13-6-0.971117108580164-1.01572999746118	chr10	26374939	26375309	+	0	NA	Intergenic	B1_Mm|SINE|Alu	19333	NR_033633	667572	Mm.482728	NR_033633	ENSMUSG00000098179	Gm8709	EG667572	glyceraldehyde-3-phosphate dehydrogenase pseudogene	pseudo
common_peak1-7688-13-15--0.221527969362231-0.308519316180257	chr1	82291462	82292099	+	0	NA	Intergenic	Intergenic	-3766	NM_010570	16367	Mm.4952	NM_010570	ENSMUSG00000055980	Irs1	G972R|IRS-1	insulin receptor substrate 1	protein-coding
unique_peak2-37386-2-6--1.72480917832092-1.26211192963361	chr4	139716821	139717222	+	0	NA	intron (NM_198610, intron 1 of 9)	intron (NM_198610, intron 1 of 9)	85705	NM_198610	230868	Mm.298731	NM_198610	ENSMUSG00000040972	Igsf21	BC055811|Gm141	immunoglobulin superfamily, member 21	protein-coding
unique_peak2-36589-3-13--2.22133801201688-2.36932189928148	chr2	175737947	175738648	+	0	NA	intron (NM_001099349, intron 1 of 4).6	RLTR26|LTR|ERVK	1223	NM_001177543	100039060	Mm.289463	NM_001177543		0610010B08Rik	Gm2026	RIKEN cDNA 0610010B08 gene	protein-coding
common_peak1-18424-21-26--0.185398236897233-0.318406410381916	chr8	77517559	77518401	+	0	NA	intron (NM_178017, intron 1 of 10)	CpG	378	NM_178017	70823	Mm.261739	NM_178017	ENSMUSG00000034518	Hmgxb4	4733401K04Rik|AI316803|E430025G12|Hmgb2l1	HMG box domain containing 4	protein-coding
common_peak2-24667-21-26--0.185398236897233-0.318406410381916	chr17	36032018	36032680	+	0	NA	intron (NM_001033630, intron 2 of 5)	intron (NM_001033630, intron 2 of 5)	1974	NM_001033630	69662	Mm.260159	NM_001033630	ENSMUSG00000050705	2310061I04Rik	-	RIKEN cDNA 2310061I04 gene	protein-coding
unique_peak2-33595-6-6--0.241956811677302-0.947717972411649	chr11	88495837	88496210	+	0	NA	intron (NM_054043, intron 5 of 13)	intron (NM_054043, intron 5 of 13)	83520	NM_054043	76626	Mm.400451	NM_054043	ENSMUSG00000069769	Msi2	1700105C15Rik|AI451722|AI563628|AW489193|Msi2h	musashi RNA-binding protein 2	protein-coding
common_peak2-29544-28-47--0.532003380899694-0.835790028376013	chr6	39573381	39574566	+	0	NA	intron (NM_139294, intron 18 of 21)	intron (NM_139294, intron 18 of 21)	31391	NM_026612	68198	Mm.29415	NM_026612	ENSMUSG00000002416	Ndufb2	1810011O01Rik|8kDa|AGGG|AI325567|CI-AGGG	NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 2	protein-coding
common_peak2-22153-19-21--0.0567442919756109-0.301029995663971	chr12	86834191	86834901	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	19695	NM_010234	14281	Mm.246513	NM_010234	ENSMUSG00000021250	Fos	D12Rfj1|c-fos|cFos	FBJ osteosarcoma oncogene	protein-coding
common_peak2-20652-19-36--0.806766038967264-1.16836819221353	chr10	81863712	81864388	+	0	NA	Intergenic	Intergenic	91313	NM_001255990	432480	Mm.280394	NM_001255990	ENSMUSG00000094186	Gm1553	Lcrn	predicted gene 1553	protein-coding
common_peak2-21908-12-6-0.841421063030034-1.58711810488664	chr12	8863838	8864237	+	0	NA	Intergenic	Intergenic	-64076	NM_008640	17775	Mm.30071	NM_008640	ENSMUSG00000020585	Laptm4a	AA286466|LAPTM4|MTP|Mtrp|mKIAA0108	lysosomal-associated protein transmembrane 4A	protein-coding
common_peak2-28676-17-8-1.04837133676273-1.30305656033811	chr5	32182922	32183444	+	0	NA	intron (NM_181281, intron 5 of 10)	Lx5|LINE|L1	182760	NM_181282	107976	Mm.482126	NM_144541	ENSMUSG00000052139	Bre	6030405P19Rik|AI429776|B830038C02Rik	brain and reproductive organ-expressed protein	protein-coding
common_peak1-12114-20-20-0.0957573618124323-0.321718508207528	chr17	26601315	26602314	+	0	NA	Intergenic	Intergenic	43603	NM_013642	19252	Mm.239041	NM_013642	ENSMUSG00000024190	Dusp1	3CH134|MKP1|Ptpn16|U19515|erp|mkp-1	dual specificity phosphatase 1	protein-coding
common_peak2-25422-37-24-0.882136881711094-1.82819694957564	chr19	3282545	3283501	+	0	NA	promoter-TSS (NM_172252)	promoter-TSS (NM_172252)	-13	NM_009212	20589	Mm.3179	NM_009212		Ighmbp2	AEP|Catf1|RIPE3b1|Smbp-2|Smbp2|Smubp2|nmd|sma	immunoglobulin mu binding protein 2	protein-coding
unique_peak1-1812-24-5-2.20824740204656-4.1393347358673	chr14	27562100	27563011	+	0	NA	Intergenic	Intergenic	-73223	NM_178668	211948	Mm.290758	NM_178668		Pde12	2'-PDE|E430028B21Rik	phosphodiesterase 12	protein-coding
common_peak1-11618-34-28-0.524087531873694-0.913161965438643	chr16	18686837	18687812	+	0	NA	Intergenic	Intergenic	-57293	NM_213614	18951	Mm.20365	NM_213614	ENSMUSG00000072214	Sept5	Cdcrel-1|Cdcrel1|Pnutl1	septin 5	protein-coding
common_peak1-14267-13-20--0.613845392140992-0.532159081577619	chr2	156144023	156144635	+	0	NA	intron (NM_027585, intron 1 of 12)	RMER6A|LTR|ERVK	-5889	NM_020255	19018	Mm.389346	NM_020255	ENSMUSG00000046229	Scand1	2310003H23Rik|Leap1|PGC-2|Ppargc2	SCAN domain-containing 1	protein-coding
common_peak2-31841-6-6--0.241956811677302-0.947717972411649	chr9	45505133	45505541	+	0	NA	intron (NM_001081270, intron 11 of 32)	intron (NM_001081270, intron 11 of 32)	131384	NM_001081373	214552	Mm.260103	NM_172531	ENSMUSG00000043987	Cep164	AI450905|BC027092|D030051D21|mKIAA1052	centrosomal protein 164	protein-coding
unique_peak2-39377-6-11--1.01956439034085-1.32595962126035	chr9	20898121	20898560	+	0	NA	Intergenic	Intergenic	-1888	NR_038081	100568458	Mm.196137	NR_038081		Raver1-fdx1l	-	Raver1-Fdx1l readthrough	ncRNA
common_peak1-12727-9-9--0.132314688483142-1.03275496310833	chr18	53523365	53523907	+	0	NA	intron (NM_029394, intron 3 of 6)	intron (NM_029394, intron 3 of 6)	54025	NM_008908	19038	Mm.4587	NM_008908	ENSMUSG00000024538	Ppic	CyP-20c	peptidylprolyl isomerase C	protein-coding
common_peak1-13668-15-19--0.309763344331706-0.356936432242222	chr2	27676225	27677049	+	0	NA	Intergenic	MTE2b|LTR|MaLR	-65308	NM_015734	12831	Mm.7281	NM_015734	ENSMUSG00000026837	Col5a1	AI413331	collagen, type V, alpha 1	protein-coding
common_peak1-16404-38-19-1.24952456441117-3.1189257363273	chr5	125386951	125388623	+	0	NA	Intergenic	Intergenic	44712	NM_001081750	269704	Mm.138617	NM_001081750	ENSMUSG00000079215	Zfp664	AW060232|D930038J03Rik|ZFOC1|Znf664	zinc finger protein 664	protein-coding
unique_peak2-35426-2-7--1.91745425626332-1.45399745587252	chr17	34627088	34627447	+	0	NA	intron (NR_004051, intron 7 of 8)	intron (NR_004051, intron 7 of 8)	7107	NR_004051	81497	Mm.484231	NR_004051		Btnl5-ps	Btnl5|ENSMUSG00000073420|Gm15330|NG12|OTTMUSG00000020237	butyrophilin-like 5, pseudogene	pseudo
unique_peak2-34066-5-6--0.511735258063458-0.947717972411649	chr13	99516337	99516752	+	0	NA	intron (NM_172591, intron 17 of 25)	intron (NM_172591, intron 17 of 25)	-51758	NM_001025606	380863	Mm.28264	NM_001025606	ENSMUSG00000052485	Tmem171	Gm905	transmembrane protein 171	protein-coding
common_peak2-31022-10-13--0.450939577048835-0.386243247519795	chr8	11555152	11555815	+	0	NA	promoter-TSS (NM_011919)	promoter-TSS (NM_011919)	-583	NM_011919	26356	Mm.25709	NM_011919	ENSMUSG00000045969	Ing1	2610028J21Rik|AA407184|AI875420|mING1h|p33Ing1|p37Ing1b	inhibitor of growth family, member 1	protein-coding
common_peak1-14685-19-17-0.232762325219374-0.392630012299441	chr3	65494132	65494984	+	0	NA	intron (NM_001166659, intron 3 of 12)	intron (NM_001166659, intron 3 of 12)	24408	NM_001166659	624866	Mm.296317	NM_001037923	ENSMUSG00000074579	Lekr1	EG546798|EG624866|Gm6534	leucine, glutamate and lysine rich 1	protein-coding
common_peak1-12573-51-82--0.300115605744351-0.629493032588487	chr18	11656836	11658120	+	0	NA	Intergenic	Intergenic	-134307	NM_001252495	225182	Mm.154275	NM_175458	ENSMUSG00000041238	Rbbp8	9930104E21Rik|CtIP|RBBP-8|RIM|SAE2	retinoblastoma binding protein 8	protein-coding
common_peak2-28449-9-6-0.382258484346616-1.11707584880836	chr4	150582771	150583168	+	0	NA	intron (NM_001081557, intron 6 of 23)	intron (NM_001081557, intron 6 of 23)	-150907	NM_009498	22319	Mm.273930	NM_009498	ENSMUSG00000028955	Vamp3	D130027G05Rik|VAMP-3|ceb	vesicle-associated membrane protein 3	protein-coding
unique_peak1-5362-13-1-2.77847203063777-3.64038867156802	chr5	92887172	92887749	+	0	NA	promoter-TSS (NR_105843)	promoter-TSS (NR_105843)	-123	NR_105843	102466159		NR_105843	miRBase:MI0021953	Mir6415	mmu-mir-6415	microRNA mir-6415	ncRNA
unique_peak1-2508-10-2-1.77145284428761-2.09384600808989	chr16	15710082	15710635	+	0	NA	intron (NM_011159, intron 32 of 85)	RMER16|LTR|ERVK	72399	NM_011159	19090	Mm.71	NM_011159	ENSMUSG00000022672	Prkdc	AI326420|AU019811|DNA-PKcs|DNAPDcs|DNAPK|DNPK1|DOXNPH|HYRC1|XRCC7|dxnph|p460|scid|slip	protein kinase, DNA activated, catalytic polypeptide	protein-coding
common_peak1-8087-36-38-0.193918867305506-0.429377759889511	chr1	180725660	180726796	+	0	NA	intron (NM_001161665, intron 4 of 14)	T-rich|Low_complexity|Low_complexity	266972	NM_001161665	269152	Mm.129727	NM_177724	ENSMUSG00000026494	Kif26b	4832420M10|BC056349|D230039L06Rik	kinesin family member 26B	protein-coding
common_peak2-30280-35-46--0.123218593215134-0.322992865635707	chr7	16816065	16817069	+	0	NA	Intergenic	B3|SINE|B2	-9186	NM_027883	71723	Mm.75259	NM_027883	ENSMUSG00000006019	Dhx34	1200013B07Rik|1810012L18Rik|Ddx34|mKIAA0134	DEAH (Asp-Glu-Ala-His) box polypeptide 34	protein-coding
common_peak1-18126-8-9--0.316705676939792-1.03275496310833	chr8	8604816	8605342	+	0	NA	Intergenic	Intergenic	55694	NM_010111	13642	Mm.209813	NM_010111	ENSMUSG00000001300	Efnb2	ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1	ephrin B2	protein-coding
common_peak1-8790-42-19-1.42040123297982-4.09923233888539	chr11	16591051	16593215	+	0	NA	Intergenic	L1Md_A|LINE|L1	-60073	NM_207655	13649	Mm.8534	NM_007912	ENSMUSG00000020122	Egfr	9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2	epidermal growth factor receptor	protein-coding
unique_peak1-1642-10-3-1.35641534500877-1.75805390616669	chr13	51972290	51972889	+	0	NA	Intergenic	Intergenic	30545	NM_011817	23882	Mm.281298	NM_011817	ENSMUSG00000021453	Gadd45g	AI327420|C86281|CR6|DDIT2|OIG37	growth arrest and DNA-damage-inducible 45 gamma	protein-coding
unique_peak1-2559-12-4-1.32684789020028-2.04196296489515	chr16	24417861	24418544	+	0	NA	intron (NM_178665, intron 1 of 12)	intron (NM_178665, intron 1 of 12)	-24461	NR_037954	68841	Mm.361995	NR_037954		1110054M08Rik	AI481106	RIKEN cDNA 1110054M08 gene	ncRNA
unique_peak1-4926-10-1-2.35641534500877-2.57096726280955	chr4	58510201	58510730	+	0	NA	intron (NM_010336, intron 2 of 3)	intron (NM_010336, intron 2 of 3)	1810	NM_001290486	14745	Mm.4772	NM_010336	ENSMUSG00000038668	Lpar1	AI326300|Edg2|Gpcr26|Kdt2|lpA1|vzg-1	lysophosphatidic acid receptor 1	protein-coding
unique_peak2-37706-5-8--0.874305337448166-1.10484139239135	chr5	103732469	103732929	+	0	NA	Intergenic	L1M5|LINE|L1	-4651	NR_040699	74624	Mm.389662	NR_040699		4930429D17Rik	-	RIKEN cDNA 4930429D17 gene	ncRNA
common_peak2-28663-36-39-0.157392991280392-0.394172396164276	chr5	31596443	31597288	+	0	NA	intron (NM_022424, intron 4 of 6)	intron (NM_022424, intron 4 of 6)	1385	NM_022424	64339	Mm.292544	NM_022424	ENSMUSG00000038552	Fndc4	2810430J06Rik|6330410H20Rik|AB030187|AI838506|AW487863|FRCP1|Fnmp1	fibronectin type III domain containing 4	protein-coding
unique_peak1-5854-6-1-1.5653981103803-1.56314192529759	chr6	83131612	83132133	+	0	NA	intron (NM_007835, intron 1 of 31)	B1F|SINE|Alu	2289	NM_007835	13191	Mm.6919	NM_007835	ENSMUSG00000031865	Dctn1	AL022633|Glued|p150|p150<glued>	dynactin 1	protein-coding
common_peak1-11078-92-106-0.350885097301618-1.11068363549827	chr15	58887492	58889962	+	0	NA	intron (NM_001146180, intron 2 of 13)	intron (NM_001146180, intron 2 of 13)	24854	NM_001146180	211401	Mm.215481	NM_144800	ENSMUSG00000022353	Mtss1	2310003N14Rik|BC024131|D130001D01Rik|Mim|mKIAA0429	metastasis suppressor 1	protein-coding
common_peak2-27874-12-26--1.10611151707583-1.26025077975594	chr4	12140245	12141010	+	0	NA	Intergenic	L1Md_A|LINE|L1	-41465	NM_026558	68099	Mm.25340	NM_026558	ENSMUSG00000028218	Fam92a	6720467C03Rik|Fam92a1	family with sequence similarity 92, member A	protein-coding
common_peak1-11318-67-25-1.8439717646419-9.35790705420786	chr15	85422688	85424542	+	0	NA	intron (NR_040433, intron 4 of 4)	MLT1J|LTR|MaLR	-11364	NM_009528	22422	Mm.306946	NM_009528	ENSMUSG00000022382	Wnt7b	Wnt-7b	wingless-type MMTV integration site family, member 7B	protein-coding
common_peak2-21871-35-74--0.797448432033376-2.10608451406335	chr12	69681116	69682552	+	0	NA	Intergenic	L1MA7|LINE|L1	578339	NM_009093	20090	Mm.379006	NM_009093	ENSMUSG00000034892	Rps29	-	ribosomal protein S29	protein-coding
unique_peak1-6369-12-1-2.64877598508764-3.36932189928148	chr7	67443134	67443761	+	0	NA	Intergenic	Lx9|LINE|L1	-158342	NM_001082962	20646	Mm.274995	NM_013670	ENSMUSG00000000948	Snrpn	2410045I01Rik|HCERN3|Peg4|Pwcr1|SMN	small nuclear ribonucleoprotein N	protein-coding
common_peak1-9827-28-23-0.467996619100306-0.690880484874617	chr12	72085803	72086755	+	0	NA	intron (NM_011184, intron 5 of 10)	intron (NM_011184, intron 5 of 10)	10669	NM_011184	19167	Mm.296338	NM_011184		Psma3	Lmpc8	proteasome (prosome, macropain) subunit, alpha type 3	protein-coding
unique_peak2-34403-3-7--1.41398308995928-1.23214870625617	chr14	7941343	7941852	+	0	NA	intron (NM_001270812, intron 2 of 5).3	B3|SINE|B2	-3626	NM_001024712	100042149	Mm.396155	NM_001024712	ENSMUSG00000092167	Gm3696	544988|ENSMUSG00000056940|Gm10014	predicted gene 3696	protein-coding
common_peak2-30403-32-57--0.578888975907912-1.03825765497309	chr7	35055720	35056611	+	0	NA	intron (NM_172741, intron 1 of 12)	B1_Mur1|SINE|Alu	14463	NM_172741	233103	Mm.491097	NM_172741	ENSMUSG00000066571	4931406P16Rik	AA553327|mKIAA0355	RIKEN cDNA 4931406P16 gene	protein-coding
common_peak1-13501-10-12--0.344024373132323-0.340565874754526	chr2	68861813	68862266	+	0	NA	intron (NM_172856, intron 4 of 9)	intron (NM_172856, intron 4 of 9)	-111818	NM_181547	329416	Mm.90047	NM_181547	ENSMUSG00000034738	Nostrin	Daip2|mDaIP2	nitric oxide synthase trafficker	protein-coding
common_peak1-9285-16-17--0.0516613591742505-0.301029995663984	chr11	88235307	88236017	+	0	NA	intron (NM_054043, intron 7 of 13)	intron (NM_054043, intron 7 of 13)	69387	NR_039545	100628571		NR_039545	miRBase:MI0016973	Mir378b	mmu-mir-378b	microRNA 378b	ncRNA
unique_peak2-37950-6-8--0.60452689106201-1.03789460276074	chr5	151054645	151055082	+	0	NA	Intergenic	Intergenic	-7642	NM_172887	320365	Mm.216590	NM_172887	ENSMUSG00000056602	Fry	13CDNA73|9330186A19Rik|AF346502|AI462658|C87180|D930046M03|cg003|mKIAA4143	furry homolog (Drosophila)	protein-coding
unique_peak1-3135-10-2-1.77145284428761-2.09384600808989	chr18	36385717	36386254	+	0	NA	Intergenic	Intergenic	-29171	NM_001167891	100042150	Mm.380390	NM_001167891	ENSMUSG00000060275	Nrg2	Don1|NTAK	neuregulin 2	protein-coding
common_peak1-12639-36-20-1.08700366338899-2.44377456520723	chr18	34958249	34959394	+	0	NA	intron (NM_001081256, intron 5 of 23)	intron (NM_001081256, intron 5 of 23)	22159	NM_001081256	277250	Mm.277906	NM_029518	ENSMUSG00000038773	Kdm3b	5830462I21Rik|JHDM2B|Jmjd1b|mKIAA1082	KDM3B lysine (K)-specific demethylase 3B	protein-coding
common_peak2-20721-38-72--0.618371899581487-1.3503990867063	chr10	96616988	96618280	+	0	NA	Intergenic	Intergenic	119232	NR_045358	75301	Mm.108650	NR_045358		4930556N09Rik	-	RIKEN cDNA 4930556N09 gene	ncRNA
common_peak2-31940-22-15-0.647284105087405-0.849699271740893	chr9	64049671	64050496	+	0	NA	intron (NM_008927, intron 5 of 10)	intron (NM_008927, intron 5 of 10)	22979	NM_183316	330959	Mm.24082	NM_183316	ENSMUSG00000032398	Snapc5	2010103A03Rik	small nuclear RNA activating complex, polypeptide 5	protein-coding
unique_peak1-5844-9-2-1.60465090568306-1.87199725847353	chr6	82754250	82754747	+	0	NA	Intergenic	(GAAA)n|Simple_repeat|Simple_repeat	-30050	NM_013820	15277	Mm.255848	NM_013820	ENSMUSG00000000628	Hk2	AI642394|HKII	hexokinase 2	protein-coding
unique_peak1-2836-7-4-0.477162735410827-1.09384600808989	chr17	28281405	28281851	+	0	NA	intron (NM_001004366, intron 1 of 21)	intron (NM_001004366, intron 1 of 21)	2157	NM_001004366	268935	Mm.258491	NM_001004366	ENSMUSG00000038677	Scube3	CEGF3|D030038I21Rik	signal peptide, CUB domain, EGF-like 3	protein-coding
common_peak1-12219-17-8-1.04837133676273-1.30305656033811	chr17	34654881	34655782	+	0	NA	Intergenic	Intergenic	-1034	NM_030747	624681	Mm.471592	NM_030747	ENSMUSG00000058762	Btnl6	EG624681|Gm6519|NG13	butyrophilin-like 6	protein-coding
unique_peak2-38140-3-9--1.73591118484664-1.57096726280955	chr6	84588015	84588654	+	0	NA	intron (NM_177077, intron 20 of 21)	intron (NM_177077, intron 20 of 21)	-44432	NM_001177713	232174	Mm.255246	NM_175475	ENSMUSG00000063415	Cyp26b1	CP26|P450RAI-2	cytochrome P450, family 26, subfamily b, polypeptide 1	protein-coding
unique_peak2-34231-9-15--0.81038659359578-0.630231561310125	chr13	51847628	51848514	+	0	NA	intron (NM_001281880, intron 2 of 16)	intron (NM_001281880, intron 2 of 16)	41045	NM_001281880	20354	Mm.33903	NM_013660	ENSMUSG00000021451	Sema4d	CD100|Semacl2|Semaj|Semcl2|coll-4	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D	protein-coding
common_peak2-27114-57-72-0.0762084811989112-0.337470937500802	chr3	10439325	10440444	+	0	NA	intron (NM_029068, intron 1 of 7)	CpG	246	NM_029068	74718	Mm.440548	NM_029068	ENSMUSG00000027534	Snx16	4930522N22Rik|AI117577|AI747675	sorting nexin 16	protein-coding
unique_peak2-35087-0-10--4.29956254911151-2.57096726280955	chr16	17807139	17807613	+	0	NA	exon (NM_153790, exon 11 of 11)	exon (NM_153790, exon 11 of 11)	10001	NM_153790	224024	Mm.194950	NM_153790	ENSMUSG00000012017	Scarf2	AI194363|NSR1|SREC-II|SRECRP-1|Scarf1|Scatf1|Srec2|SrecII|W53987|W65560	scavenger receptor class F, member 2	protein-coding
common_peak2-21130-18-15-0.312919151228352-0.456667090758524	chr11	54060098	54060619	+	0	NA	TTS (NM_009969)	TTS (NM_009969)	3043	NM_009969	12981	Mm.4922	NM_009969		Csf2	Csfgm|GMCSF|Gm-CSf|MGI-IGM	colony stimulating factor 2 (granulocyte-macrophage)	protein-coding
unique_peak1-1249-11-6-0.701338662194009-1.32595962126035	chr11	115513736	115514266	+	0	NA	intron (NM_008163, intron 3 of 5)	intron (NM_008163, intron 3 of 5)	-24392	NM_001252395	67283	Mm.383426	NM_026071	ENSMUSG00000020744	Slc25a19	2900089E13Rik|DNC|MUP1|TPC	solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19	protein-coding
common_peak1-7880-22-17-0.477359103645092-0.633951497070961	chr1	134091064	134091870	+	0	NA	intron (NM_001033250, intron 1 of 3)	intron (NM_001033250, intron 1 of 3)	-3198	NR_029777	723818		NR_029777	miRBase:MI0000646	Mir135b	Mirn135b	microRNA 135b	ncRNA
common_peak1-13663-22-11-1.06232160436625-1.51503956548638	chr2	27331066	27331987	+	0	NA	promoter-TSS (NM_023336)	promoter-TSS (NM_023336)	-333	NM_001113574	67382	Mm.28721	NM_023336	ENSMUSG00000026918	Brd3	2410084F24Rik|AW060456|Fsrg2|ORFX|RINGL3	bromodomain containing 3	protein-coding
unique_peak1-540-16-5-1.53330114154691-1.80287260729378	chr1	191267811	191268613	+	0	NA	Intergenic	Intergenic	-42060	NM_001281848	16526	Mm.33304	NM_010607	ENSMUSG00000037624	Kcnk2	A430027H14Rik|AI848635|TREK-1	potassium channel, subfamily K, member 2	protein-coding
common_peak2-24021-15-19--0.309763344331706-0.356936432242222	chr16	22266099	22266666	+	0	NA	promoter-TSS (NM_009186)	promoter-TSS (NM_009186)	-380	NM_009186	20462	Mm.210352	NM_009186		Tra2b	5730405G21Rik|D16Ertd266e|SIG-41|Sfrs10|Silg41|TRA2beta	transformer 2 beta homolog (Drosophila)	protein-coding
unique_peak2-37534-1-6--2.43441193227435-1.56314192529759	chr5	24605499	24605903	+	0	NA	intron (NM_145401, intron 1 of 15)	CpG	759	NM_145401	108099	Mm.33649	NM_145401	ENSMUSG00000028944	Prkag2	2410051C13Rik|AAKG|AAKG2|AI854673|H91620p|WPWS	protein kinase, AMP-activated, gamma 2 non-catalytic subunit	protein-coding
common_peak1-13435-149-79-1.60703240234871-19.4969617207786	chr19	55255767	55260740	+	0	NA	exon (NM_009348, exon 3 of 10)	exon (NM_009348, exon 3 of 10)	2878	NM_009348	21684	Mm.42139	NM_009348	ENSMUSG00000024979	Tectb	Tctnb	tectorin beta	protein-coding
unique_peak1-1470-8-0-3.00522241794757-2.70926996097583	chr12	111430842	111431228	+	0	NA	Intergenic	Intergenic	-34752	NR_045466	67280	Mm.390495	NR_045466		3110009F21Rik	-	RIKEN cDNA 3110009F21 gene	ncRNA
common_peak1-12182-21-52--1.15843118929696-2.59472032287453	chr17	31808134	31809145	+	0	NA	Intergenic	Intergenic	-6237	NM_013501	12954	Mm.1228	NM_013501	ENSMUSG00000024041	Cryaa	Acry-1|Crya-1|Crya1|DAcry-1|lop18	crystallin, alpha A	protein-coding
unique_peak1-616-14-6-1.09186123830004-1.16633110333236	chr10	22413786	22414532	+	0	NA	intron (NM_178934, intron 4 of 4)	B1_Mus2|SINE|Alu	35079	NR_106123	102465768		NR_106123	miRBase:MI0025003	Mir7663	mmu-mir-7663	microRNA mir-7663	ncRNA
unique_peak2-33432-6-16--1.52206473087004-1.32521814697968	chr11	60913114	60913881	+	0	NA	Intergenic	Intergenic	34191	NM_010603	16515	Mm.4970	NM_010603		Kcnj12	IRK-2|IRK2|Kir2.2|MB-IRK2	potassium inwardly-rectifying channel, subfamily J, member 12	protein-coding
common_peak2-29257-20-26--0.266812717572275-0.373496418836697	chr5	140514999	140515898	+	0	NA	intron (NM_010752, intron 17 of 17)	intron (NM_010752, intron 17 of 17)	131551	NM_175522	243312	Mm.237102	NM_175522	ENSMUSG00000048988	Elfn1	A930017N06Rik|AI197272|Ppp1r28	leucine rich repeat and fibronectin type III, extracellular 1	protein-coding
common_peak2-23132-39-17-1.44583624547684-3.81634954855125	chr14	101795025	101795937	+	0	NA	Intergenic	Intergenic	-196195	NM_029680	76627	Mm.31415	NM_029680	ENSMUSG00000042888	Prr30	1700110M21Rik	proline rich 30	protein-coding
common_peak1-10905-35-25-0.730930540321412-1.34810744351377	chr15	3299796	3301216	+	0	NA	intron (NM_001286370, intron 3 of 10)	MTE2a|LTR|MaLR	-46980	NM_001166063	100039139	Mm.455610	NM_001166063	ENSMUSG00000091119	Ccdc152	ENSMUSG00000071814	coiled-coil domain containing 152	protein-coding
common_peak2-20942-10-8-0.186490343566457-1.078512453669	chr11	8704931	8705333	+	0	NA	Intergenic	Intergenic	-140594	NM_001083587	319939	Mm.337820	NM_001083587	ENSMUSG00000020422	Tns3	BC023928|F830010I22Rik|TEM6|Tens1	tensin 3	protein-coding
unique_peak2-37600-5-8--0.874305337448166-1.10484139239135	chr5	53565544	53566053	+	0	NA	intron (NM_172710, intron 7 of 23)	intron (NM_172710, intron 7 of 23)	38893	NM_172710	231238	Mm.235020	NM_172710	ENSMUSG00000029189	Sel1l3	2310045A20Rik|AI429585|mKIAA0746	sel-1 suppressor of lin-12-like 3 (C. elegans)	protein-coding
common_peak2-27946-11-5-0.923731083530457-1.477227296591	chr4	32518660	32519060	+	0	NA	intron (NM_001109661, intron 1 of 4)	intron (NM_001109661, intron 1 of 4)	14450	NM_001109661	12014	Mm.491223	NM_007521	ENSMUSG00000040270	Bach2	E030004N02Rik	BTB and CNC homology 2	protein-coding
unique_peak1-555-21-3-2.56948926526624-4.33845181153635	chr1	193541687	193542728	+	0	NA	promoter-TSS (NM_001134829)	promoter-TSS (NM_001134829)	-67	NM_001134829	226856	Mm.277958	NM_172266	ENSMUSG00000026623	Lpgat1	AI649174|AW112037|BC013667	lysophosphatidylglycerol acyltransferase 1	protein-coding
common_peak1-16412-16-9-0.796335547380699-0.844317084070804	chr5	127610925	127611729	+	0	NA	Intergenic	Intergenic	-39608	NR_045371	75916	Mm.394659	NR_045371		4930572K03Rik	-	RIKEN cDNA 4930572K03 gene	ncRNA
unique_peak1-6434-17-4-1.89636824331768-2.60953805094651	chr7	98160309	98161228	+	0	NA	Intergenic	Lx5|LINE|L1	-78528	NM_011807	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
common_peak2-20535-10-5-0.771452844287613-1.33892459842472	chr10	64836927	64837152	+	0	NA	Intergenic	Intergenic	749773	NR_038039	69433	Mm.23366	NR_038039		1700023F02Rik	AV205046	RIKEN cDNA 1700023F02 gene	ncRNA
unique_peak2-35823-5-17--1.87430533744817-1.80287260729378	chr18	64958926	64959605	+	0	NA	Intergenic	ORR1B1|LTR|MaLR	-88145	NM_001114386	83814	Mm.98668	NM_031881	ENSMUSG00000024589	Nedd4l	1300012C07Rik|Nedd4-2|Nedd4b	neural precursor cell expressed, developmentally down-regulated gene 4-like	protein-coding
unique_peak2-38289-12-16--0.4386868561627-0.368541233333383	chr6	134830071	134830741	+	0	NA	intron (NR_072990, intron 3 of 4)	MTD|LTR|MaLR	7397	NR_074084	14760	Mm.4787	NM_008157	ENSMUSG00000032641	Gpr19	-	G protein-coupled receptor 19	protein-coding
common_peak2-27000-8-5-0.420259917226415-1.10484139239135	chr2	170185105	170185485	+	0	NA	intron (NR_040610, intron 2 of 7)	intron (NR_040610, intron 2 of 7)	3434	NR_040610	73303	Mm.443297	NR_040610	ENSMUSG00000086999	Bcas1os2	1700040N02Rik	breast carcinoma amplified sequence 1, opposite strand 2	ncRNA
unique_peak1-4882-9-4-0.867685311516858-1.36011389749466	chr4	34777824	34778393	+	0	NA	intron (NM_013889, intron 4 of 7)	B1F|SINE|Alu	52089	NM_013889	30046	Mm.38193	NM_013889	ENSMUSG00000039967	Zfp292	5730450D02Rik|5830493J20Rik|9430062L07Rik|AI449016|Krox-10|Zfp-15|Zfp15|Zn-15|Zn-16|mKIAA0530	zinc finger protein 292	protein-coding
common_peak1-9319-14-19--0.422711934529718-0.403453972741636	chr11	94601339	94602142	+	0	NA	Intergenic	RLTR14-int|LTR|ERV1	20756	NM_001105561	217122	Mm.24063	NM_183153		Gm11545	A430060F13Rik|C86086|OTTMUSG00000002043	predicted gene 11545	protein-coding
common_peak2-30958-108-99-0.726320771633345-3.92224721777158	chr8	84197070	84199029	+	0	NA	intron (NM_001297596, intron 2 of 24)	intron (NM_001297596, intron 2 of 24)	331588	NM_001297593	234515	Mm.324468	NM_001024617	ENSMUSG00000037940	Inpp4b	E130107I17Rik	inositol polyphosphate-4-phosphatase, type II	protein-coding
common_peak2-25454-28-23-0.467996619100306-0.690880484874617	chr19	4169665	4170209	+	0	NA	exon (NM_134148, exon 8 of 10)	exon (NM_134148, exon 8 of 10)	5542	NM_134148	107239	Mm.482310	NM_134148	ENSMUSG00000075289	Carns1	AI790298|Atpgd1|mKIAA1394	carnosine synthase 1	protein-coding
common_peak2-28300-11-10-0.0492619656143161-0.31137425193576	chr4	132422007	132422695	+	0	NA	intron (NM_133887, intron 3 of 8)	URR1A|DNA|MER1_type	18022	NM_133887	100226	Mm.28237	NM_133887		Stx12	AI850350|AU041521|Stx13	syntaxin 12	protein-coding
common_peak1-16560-15-13-0.204809828498052-0.368541233333383	chr5	145201213	145201800	+	0	NA	Intergenic	B1F|SINE|Alu	82112	NR_102373	100579137		NR_102372		Dmr	-	Dmrt1 related	ncRNA
unique_peak2-33621-1-7--2.62705701021674-1.80617997398389	chr11	95851759	95852207	+	0	NA	intron (NM_009951, intron 2 of 14)	intron (NM_009951, intron 2 of 14)	15275	NM_009951	140486	Mm.294769	NM_009951	ENSMUSG00000013415	Igf2bp1	AL024068|AW549074|CRD-BP|Crdbp|D030026A21Rik|D11Moh40e|D11Moh45|IMP-1|Neilsen|ZBP-1|Zbp1	insulin-like growth factor 2 mRNA binding protein 1	protein-coding
common_peak1-18082-32-36-0.0696386535907099-0.327094617740873	chr8	72547206	72548384	+	0	NA	intron (NM_028993, intron 12 of 18)	intron (NM_028993, intron 12 of 18)	18838	NM_001167939	74549	Mm.269061	NM_028993	ENSMUSG00000031858	Mau2	9130404D08Rik|A930019L04Rik|C77863|C79014|Mau-2|mKIAA0892	MAU2 chromatid cohesion factor homolog (C. elegans)	protein-coding
common_peak2-23883-65-61-0.537969629090252-1.51798608485257	chr16	22264801	22265994	+	0	NA	intron (NM_009186, intron 1 of 8)	CpG	605	NM_009186	20462	Mm.210352	NM_009186		Tra2b	5730405G21Rik|D16Ertd266e|SIG-41|Sfrs10|Silg41|TRA2beta	transformer 2 beta homolog (Drosophila)	protein-coding
common_peak2-23861-8-9--0.316705676939792-1.03275496310833	chr15	102393419	102393847	+	0	NA	intron (NM_146065, intron 3 of 10)	intron (NM_146065, intron 3 of 10)	-38260	NR_033409	54615	Mm.445915	NM_018787	ENSMUSG00000023052	Npff	-	neuropeptide FF-amide peptide precursor	protein-coding
common_peak2-28732-10-11--0.228547155712387-0.31137425193576	chr5	36397653	36398175	+	0	NA	intron (NM_030889, intron 9 of 26)	intron (NM_030889, intron 9 of 26)	-148756	NM_175249	76943	Mm.44242	NM_175249	ENSMUSG00000043430	Psapl1	2310020A21Rik	prosaposin-like 1	protein-coding
common_peak2-24022-14-9-0.577288065470282-0.630231561310125	chr16	22439961	22440413	+	0	NA	promoter-TSS (NM_023794)	promoter-TSS (NM_023794)	-544	NM_023794	104156	Mm.155708	NM_023794	ENSMUSG00000013089	Etv5	1110005E01Rik|8430401F14Rik|ERM	ets variant 5	protein-coding
unique_peak2-39856-2-6--1.72480917832092-1.26211192963361	chrX	71622766	71623162	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	-4276	NR_103489	100169864	Mm.3979	NM_001278271	ENSMUSG00000015290	Slc10a3-ubl4	Tu11	Slc10a3-Ubl4 readthrough	protein-coding
unique_peak2-37447-4-11--1.6084230145744-1.68134727924692	chr4	155734739	155735243	+	0	NA	Intergenic	Intergenic	-126025	NM_198305	231003	Mm.423038	NM_198305	ENSMUSG00000078484	Klhl17	AL022703|BC058738	kelch-like 17	protein-coding
common_peak2-24207-25-49--0.782006284429619-1.42714050806394	chr16	70313816	70314519	+	0	NA	promoter-TSS (NM_028803)	promoter-TSS (NM_028803)	-27	NM_028803	74185	Mm.396102	NM_028803	ENSMUSG00000022707	Gbe1	2310045H19Rik|2810426P10Rik|D16Ertd536e	glucan (1,4-alpha-), branching enzyme 1	protein-coding
unique_peak2-32778-9-5-0.604650905683064-1.21398586181642	chr1	178187887	178188445	+	0	NA	intron (NM_176916, intron 1 of 9)	intron (NM_176916, intron 1 of 9)	17277	NM_176916	319455	Mm.338001	NM_176916	ENSMUSG00000055214	Pld5	B230365F16Rik	phospholipase D family, member 5	protein-coding
unique_peak1-1537-17-6-1.41094141614743-1.84350559086818	chr13	17604263	17605024	+	0	NA	intron (NM_138654, intron 8 of 13)	L1_Mur3|LINE|L1	181956	NM_138654	192136	Mm.364180	NM_138654		Sugct	5033411D12Rik|D17907	succinyl-CoA glutarate-CoA transferase	protein-coding
common_peak2-21705-40-53--0.09591181941237-0.309382327481447	chr11	106919871	106920928	+	0	NA	intron (NM_176850, intron 18 of 27)	B1_Mur4|SINE|Alu	30862	NM_001163473	69066	Mm.40679	NM_001163473		1810010H24Rik	OTTMUSG00000003581	RIKEN cDNA 1810010H24 gene	protein-coding
common_peak1-12479-10-14--0.550475250599749-0.446472590016315	chr17	84510989	84511493	+	0	NA	Intergenic	Intergenic	33241	NR_045458	74473	Mm.399575	NR_045458		4933433H22Rik	-	RIKEN cDNA 4933433H22 gene	ncRNA
common_peak2-19856-45-20-1.46804060256611-4.49741418752703	chr1	91578323	91579037	+	0	NA	intron (NR_015540, intron 1 of 3)	intron (NR_015540, intron 1 of 3)	1787	NR_015540	74403	Mm.444291	NR_015540		4933400F21Rik	1700091C04Rik|4930565K10Rik	RIKEN cDNA 4933400F21 gene	ncRNA
unique_peak1-2004-8-3-1.00522241794757-1.39487600375387	chr15	3259339	3259838	+	0	NA	Intergenic	Lx4B|LINE|L1	-6062	NM_001166063	100039139	Mm.455610	NM_001166063	ENSMUSG00000091119	Ccdc152	ENSMUSG00000071814	coiled-coil domain containing 152	protein-coding
common_peak2-21729-7-6--0.00826409175941478-0.97990265578305	chr11	113684166	113684573	+	0	NA	intron (NM_172800, intron 34 of 44)	MTD|LTR|MaLR	-71240	NM_001163346	56699	Mm.293378	NM_020006	ENSMUSG00000041598	Cdc42ep4	1500041M20Rik|Borg4|CEP4	CDC42 effector protein (Rho GTPase binding) 4	protein-coding
common_peak2-30495-8-7-0.00522241794757061-1.00793137938329	chr7	62419568	62419971	+	0	NA	intron (NM_178705, intron 5 of 11)	L1_Mur3|LINE|L1	329154	NM_178705	233271	Mm.387344	NM_178705		Luzp2	9330154K17Rik|D130073E01	leucine zipper protein 2	protein-coding
common_peak1-15819-41-54--0.0802110086759997-0.30922471743021	chr5	91962322	91963856	+	0	NA	intron (NM_145562, intron 1 of 3)	intron (NM_145562, intron 1 of 3)	16363	NM_145562	231440	Mm.5002	NM_145562		Parm1	2210012L08Rik|9130213B05Rik|W91666	prostate androgen-regulated mucin-like protein 1	protein-coding
common_peak1-14125-111-104-0.703448273744046-3.88159016406797	chr2	130178114	130179645	+	0	NA	intron (NM_001110513, intron 6 of 16)	intron (NM_001110513, intron 6 of 16)	44486	NM_019696	56264	Mm.112701	NM_019696	ENSMUSG00000027408	Cpxm1	AA986902|Cpx-1|Cpx1|Cpxm	carboxypeptidase X 1 (M14 family)	protein-coding
unique_peak2-38503-5-10--1.16381195464315-1.33892459842472	chr7	41393501	41393949	+	0	NA	Intergenic	Intergenic	-2080513	NM_001013810	434171	Mm.60990	NM_001013810	ENSMUSG00000060565	Gm5591	EG434171	predicted gene 5591	protein-coding
common_peak1-18796-16-17--0.0516613591742505-0.301029995663984	chr9	46120513	46121352	+	0	NA	intron (NM_183104, intron 3 of 12)	intron (NM_183104, intron 3 of 12)	7137	NM_183104	74361	Mm.159169	NM_183104	ENSMUSG00000056617	4931429L15Rik	-	RIKEN cDNA 4931429L15 gene	protein-coding
common_peak1-8484-10-15--0.643584654991231-0.519648556297791	chr10	80676837	80677374	+	0	NA	intron (NM_178662, intron 4 of 12)	intron (NM_178662, intron 4 of 12)	-12323	NM_027120	69564	Mm.437211	NM_027120	ENSMUSG00000004939	Nmrk2	2310015C21Rik|Itgb1bp3|Mibp	nicotinamide riboside kinase 2	protein-coding
common_peak2-30814-21-18-0.32156175182265-0.48779450977742	chr7	128319791	128320628	+	0	NA	Intergenic	L2a|LINE|L2	93257	NM_139310	246190	Mm.221073	NM_139310	ENSMUSG00000034990	Otoa	-	otoancorin	protein-coding
common_peak2-28739-22-27--0.160070816970199-0.317737750275047	chr5	36714399	36715120	+	0	NA	intron (NM_030889, intron 1 of 26)	ORR1D1|LTR|MaLR	26029	NM_030889	81840	Mm.34113	NM_030889	ENSMUSG00000029093	Sorcs2	N28137|mKIAA1329	sortilin-related VPS10 domain containing receptor 2	protein-coding
unique_peak1-5586-9-4-0.867685311516858-1.36011389749466	chr5	151168168	151168550	+	0	NA	intron (NM_172887, intron 11 of 60)	intron (NM_172887, intron 11 of 60)	105854	NM_172887	320365	Mm.216590	NM_172887	ENSMUSG00000056602	Fry	13CDNA73|9330186A19Rik|AF346502|AI462658|C87180|D930046M03|cg003|mKIAA4143	furry homolog (Drosophila)	protein-coding
unique_peak1-757-13-0-3.77847203063777-4.51544993495972	chr10	118761119	118761764	+	0	NA	Intergenic	Intergenic	-84330	NM_027994	71902	Mm.203965	NM_027994	ENSMUSG00000020114	Cand1	2310038O07Rik|6330512O03Rik|AI195005|AI846556|D10Ertd516e|Tp120a|mKIAA0829	cullin associated and neddylation disassociated 1	protein-coding
common_peak2-25504-11-11--0.0762689164695427-0.301029995663976	chr19	5449907	5450514	+	0	NA	exon (NM_010235, exon 2 of 4)	exon (NM_010235, exon 2 of 4)	2512	NM_010235	14283	Mm.6215	NM_010235	ENSMUSG00000024912	Fosl1	AW538199|Fra1|fra-1	fos-like antigen 1	protein-coding
unique_peak1-3276-10-4-1.03448725012141-1.5150158574804	chr18	73751224	73751682	+	0	NA	3' UTR (NM_001039214, exon 2 of 2)	3' UTR (NM_001039214, exon 2 of 2)	19094	NM_001039214	240396	Mm.24131	NM_001039214	ENSMUSG00000037253	Mex3c	A130001D14Rik|BC035207|BM-013|Rkhd2	mex3 homolog C (C. elegans)	protein-coding
common_peak2-26350-19-38--0.882714892200562-1.37991291380345	chr2	37358911	37359442	+	0	NA	intron (NM_001033960, intron 12 of 18)	intron (NM_001033960, intron 12 of 18)	-12970	NM_177383	338346	Mm.445325	NM_177383		Gpr21	C230004C13Rik	G protein-coupled receptor 21	protein-coding
common_peak2-21646-15-16--0.075298090694683-0.301029995663976	chr11	101984272	101984775	+	0	NA	Intergenic	Intergenic	-15433	NM_145435	217212	Mm.46248	NM_145435	ENSMUSG00000017311	Pyy	-	peptide YY	protein-coding
common_peak1-10112-40-60--0.271761654811788-0.459662873060288	chr13	29983649	29985054	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-36894	NM_144536	68916	Mm.212227	NM_144536	ENSMUSG00000006191	Cdkal1	1190005B03Rik|6620401C13Rik	CDK5 regulatory subunit associated protein 1-like 1	protein-coding
common_peak2-31845-32-65--0.765302100138793-1.72757011346395	chr9	45905713	45907363	+	0	NA	intron (NM_027498, intron 1 of 24)	intron (NM_027498, intron 1 of 24)	85635	NM_027498	70661	Mm.219459	NM_027498	ENSMUSG00000034135	Sik3	5730525O22Rik|9030204A07Rik|AI447252|AI846254|AI849445|Qsk|SIK-3|mKIAA0999	SIK family kinase 3	protein-coding
common_peak2-29020-47-97--0.679868419348661-2.09792773125679	chr5	112342518	112343886	+	0	NA	Intergenic	Intergenic	-152454	NR_045833	269683	Mm.136946	NM_207252	ENSMUSG00000085271	E130006D01Rik	Gm16018|Gm681|OTTMUSG00000029083	RIKEN cDNA E130006D01 gene	ncRNA
unique_peak1-6896-39-8-2.44583624547684-7.41920079251161	chr8	95143106	95144823	+	0	NA	Intergenic	Intergenic	-54224	NM_022428	64379	Mm.137247	NM_022428		Irx6	-	Iroquois related homeobox 6 (Drosophila)	protein-coding
unique_peak1-3414-10-1-2.35641534500877-2.57096726280955	chr19	5935614	5936115	+	0	NA	Intergenic	Intergenic	-11048	NM_026772	104252	Mm.491103	NM_026772	ENSMUSG00000045664	Cdc42ep2	1110008C05Rik|Borg1|Cep2|D19Bwg1013e	CDC42 effector protein (Rho GTPase binding) 2	protein-coding
common_peak2-27431-9-22--1.33394854965279-1.52222891542741	chr3	89430325	89430977	+	0	NA	intron (NM_080466, intron 3 of 7)	intron (NM_080466, intron 3 of 7)	-88293	NM_001038587	56417	Mm.316628	NM_019655	ENSMUSG00000027951	Adar	AV242451|Adar1|Adar1p110|Adar1p150|mZaADAR	adenosine deaminase, RNA-specific	protein-coding
common_peak2-22224-26-14-1.02100849654994-1.59386218057211	chr12	116269634	116270466	+	0	NA	Intergenic	Lx5|LINE|L1	-518145	NR_106063	102465664		NR_106063	miRBase:MI0022945	Mir7094-2	mmu-mir-7094-2	microRNA mir-7094-2	ncRNA
unique_peak2-37476-4-8--1.19338551529556-1.21878474469819	chr5	3490901	3491484	+	0	NA	intron (NM_009873, intron 4 of 6)	intron (NM_009873, intron 4 of 6)	-52641	NM_001042501	68152	Mm.240265	NM_026583		Fam133b	2900022K02Rik|5830415L20Rik	family with sequence similarity 133, member B	protein-coding
unique_peak1-3207-7-1-1.79909083029819-1.80617997398389	chr18	56722108	56722545	+	0	NA	promoter-TSS (NM_138600)	promoter-TSS (NM_138600)	103	NM_001162989	56698	Mm.214569	NM_019996	ENSMUSG00000008301	Phax	2810055C14Rik|4933427L19Rik|AU018701|AU018854|D18Ertd65e|Rnuxa|p55	phosphorylated adaptor for RNA export	protein-coding
common_peak1-16284-18-9-0.990991056340989-1.23014042908325	chr5	110809439	110810322	+	0	NA	intron (NM_028596, intron 1 of 11)	intron (NM_028596, intron 1 of 11)	6266	NM_028596	381668	Mm.348782	NM_028596	ENSMUSG00000043323	Fbrsl1	2410025L10Rik|AI467568|Gm1049|mKIAA1545	fibrosin-like 1	protein-coding
common_peak1-15180-8-10--0.454209200689727-1.078512453669	chr3	152508311	152508739	+	0	NA	intron (NM_012028, intron 3 of 4)	intron (NM_012028, intron 3 of 4)	131461	NM_025662	329777	Mm.331447	NM_025662	ENSMUSG00000039047	Pigk	3000001O05Rik	phosphatidylinositol glycan anchor biosynthesis, class K	protein-coding
unique_peak2-36789-3-6--1.22133801201688-1.08602067057793	chr3	79841675	79842104	+	0	NA	Intergenic	RLTR13B3|LTR|ERVK	152037	NM_133187	68659	Mm.427274	NM_133187	ENSMUSG00000027955	Fam198b	1110032E23Rik|2210419I08Rik|AV011458|Ened	family with sequence similarity 198, member B	protein-coding
common_peak2-23740-12-15--0.351224014912361-0.332077462497413	chr15	97705475	97705887	+	0	NA	intron (NM_009504, intron 4 of 9)	intron (NM_009504, intron 4 of 9)	-30748	NM_001204278	56233	Mm.384027	NM_019572	ENSMUSG00000022475	Hdac7	5830434K02Rik|HD7|HD7a|Hdac7a|mFLJ00062	histone deacetylase 7	protein-coding
common_peak2-26111-13-21--0.680959587999529-0.607095980551316	chr2	4918810	4919488	+	0	NA	intron (NM_027290, intron 13 of 19)	intron (NM_027290, intron 13 of 19)	14688	NM_027290	70024	Mm.23828	NM_027290	ENSMUSG00000026669	Mcm10	2410041F14Rik|AU018508|C330019M07Rik|C79164	minichromosome maintenance deficient 10 (S. cerevisiae)	protein-coding
common_peak2-24162-17-34--0.910986678739929-1.23560027455358	chr16	44347293	44348299	+	0	NA	intron (NM_144550, intron 1 of 17)	CpG	282	NM_144550	212514	Mm.24035	NM_144550	ENSMUSG00000043065	Spice1	Ccdc52|D16Ertd480e	spindle and centriole associated protein 1	protein-coding
common_peak2-28630-16-15-0.118263642268062-0.328191099940264	chr5	28037220	28038039	+	0	NA	intron (NM_001136060, intron 18 of 25)	intron (NM_001136060, intron 18 of 25)	80461	NM_018878	55982	Mm.277190	NM_018878	ENSMUSG00000002221	Paxip1	D5Ertd149e|PTIP	PAX interacting (with transcription-activation domain) protein 1	protein-coding
unique_peak2-36798-2-6--1.72480917832092-1.26211192963361	chr3	82357418	82357646	+	0	NA	Intergenic	Intergenic	-5525	NM_001205099	18167	Mm.1433	NM_008731	ENSMUSG00000028004	Npy2r	NPY2-R	neuropeptide Y receptor Y2	protein-coding
common_peak1-17200-16-18--0.129663871175524-0.307235046933848	chr6	124931290	124932001	+	0	NA	Intergenic	Intergenic	-15093	NM_175696	319352	Mm.295327	NM_175696	ENSMUSG00000030329	Pianp	AI255183|AU067746|C530028O21Rik|Panp	PILR alpha associated neural protein	protein-coding
unique_peak1-7157-10-3-1.35641534500877-1.75805390616669	chr9	58131866	58132417	+	0	NA	Intergenic	Intergenic	28878	NM_010729	16949	Mm.250492	NM_010729	ENSMUSG00000032334	Loxl1	Loxl	lysyl oxidase-like 1	protein-coding
common_peak1-7955-21-19-0.247561170378873-0.427564438475253	chr1	153751578	153752552	+	0	NA	intron (NM_197990, intron 5 of 5)	intron (NM_197990, intron 5 of 5)	149561	NM_001039644	66967	Mm.337691	NM_001039644	ENSMUSG00000043019	Edem3	2310050N11Rik	ER degradation enhancer, mannosidase alpha-like 3	protein-coding
common_peak2-21831-62-55-0.603396536744481-1.70786100156634	chr11	120436855	120437948	+	0	NA	Intergenic	Intergenic	-3151	NM_011032	18453	Mm.16660	NM_011032	ENSMUSG00000025130	P4hb	ERp59|PDI|Pdia1|Thbp	prolyl 4-hydroxylase, beta polypeptide	protein-coding
unique_peak2-35389-10-29--1.55047525059975-2.39922209159552	chr17	30083064	30083979	+	0	NA	Intergenic	Arthur1|DNA|Tip100	-58511	NM_148926	21769	Mm.220972	NM_148926	ENSMUSG00000044477	Zfand3	AW539211|TEG-27|Tex27	zinc finger, AN1-type domain 3	protein-coding
common_peak2-24697-19-24--0.241168863113038-0.344491671143527	chr17	44814443	44815431	+	0	NA	intron (NR_073392, intron 4 of 7)	intron (NR_073392, intron 4 of 7)	58188	NR_073425	12393	Mm.391013	NM_009820	ENSMUSG00000039153	Runx2	AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a	runt related transcription factor 2	protein-coding
common_peak2-21472-28-39--0.2689689750659-0.409729630423047	chr11	87591011	87591983	+	0	NA	exon (NM_172449, exon 22 of 32)	exon (NM_172449, exon 22 of 32)	-15789	NM_010824	17523	Mm.4668	NM_010824	ENSMUSG00000009350	Mpo	mKIAA4033	myeloperoxidase	protein-coding
common_peak1-12656-15-10-0.552733131918359-0.604422558181019	chr18	36365709	36366435	+	0	NA	Intergenic	Intergenic	-9258	NM_001167891	100042150	Mm.380390	NM_001167891	ENSMUSG00000060275	Nrg2	Don1|NTAK	neuregulin 2	protein-coding
common_peak2-20745-28-68--1.05556533695671-2.99016688567355	chr10	111506481	111508295	+	0	NA	intron (NM_027018, intron 2 of 4)	L1_Mur1|LINE|L1	10143	NM_027018	69286	Mm.47058	NM_027018	ENSMUSG00000020213	Glipr1l1	1700011E04Rik	GLI pathogenesis-related 1 like 1	protein-coding
unique_peak2-33822-4-15--2.02346051385325-2.4322161449009	chr12	4476700	4477187	+	0	NA	intron (NM_010881, intron 1 of 22)	intron (NM_010881, intron 1 of 22)	7117	NM_010881	17977	Mm.301039	NM_010881	ENSMUSG00000020647	Ncoa1	KAT13A|SRC-1|SRC1|bHLHe74	nuclear receptor coactivator 1	protein-coding
common_peak1-19511-7-8--0.370834171144123-1.00793137938329	chrX	167032854	167033370	+	0	NA	Intergenic	Intergenic	-616263	NR_029457	654820	Mm.34441	NM_001039559	ENSMUSG00000072844	G530011O06Rik	-	RIKEN cDNA G530011O06 gene	ncRNA
unique_peak2-36391-6-7--0.434601889619698-0.97990265578305	chr2	120629083	120629559	+	0	NA	intron (NM_001024856, intron 4 of 15)	Lx8|LINE|L1	46833	NM_001024857	140810	Mm.275698	NM_080788	ENSMUSG00000090100	Ttbk2	2610507N02Rik|AI326283|B930008N24Rik|TTK|Ttbk|Ttbk1|mKIAA0847	tau tubulin kinase 2	protein-coding
unique_peak2-39071-2-5--1.50241675698448-1.08602067057793	chr8	72475329	72475707	+	0	NA	intron (NM_145596, intron 1 of 12)	B3|SINE|B2	22764	NM_001113346	234366	Mm.270044	NM_145596	ENSMUSG00000036180	Gatad2a	1110066C11Rik|BC031407|C80248	GATA zinc finger domain containing 2A	protein-coding
unique_peak2-37400-10-21--1.10301627362853-1.16735254179725	chr4	141537735	141538630	+	0	NA	promoter-TSS (NR_040672)	promoter-TSS (NR_040672)	-725	NR_040672	545691	Mm.332015	NR_040672	ENSMUSG00000085424	Fhad1os1	Gm13037|OTTMUSG00000010113	forkhead-associated (FHA) phosphopeptide binding domain 1, opposite strand 1	ncRNA
unique_peak2-35230-1-7--2.62705701021674-1.80617997398389	chr16	92628582	92628936	+	0	NA	intron (NM_001111022, intron 5 of 6)	ID_B1|SINE|B4	68815	NM_001111023	12394	Mm.4081	NM_009821	ENSMUSG00000022952	Runx1	AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b	runt related transcription factor 1	protein-coding
unique_peak1-33-9-3-1.18961340640422-1.57096726280955	chr1	13304113	13304677	+	0	NA	intron (NM_001077695, intron 1 of 21)	intron (NM_001077695, intron 1 of 21)	59769	NM_001077695	17978	Mm.2537	NM_008678	ENSMUSG00000005886	Ncoa2	9530095N19|D1Ertd433e|GRIP-1|Grip1|KAT13C|SRC-2|TIF-2|TIF2|bHLHe75	nuclear receptor coactivator 2	protein-coding
unique_peak2-36716-4-9--1.34538860874061-1.36011389749466	chr3	51953920	51954410	+	0	NA	Intergenic	MLT1A0|LTR|MaLR	-45237	NM_001004176	433586	Mm.234972	NM_001004176	ENSMUSG00000061143	Maml3	AV234550|BC049812|Mam-2|mKIAA1816	mastermind like 3 (Drosophila)	protein-coding
common_peak1-12381-49-37-0.758356309581599-1.88758293112676	chr17	66352738	66354519	+	0	NA	intron (NM_001025572, intron 8 of 12)	intron (NM_001025572, intron 8 of 12)	-53101	NM_023053	65960	Mm.10153	NM_023053	ENSMUSG00000024098	Twsg1	1810013J15Rik|9030422N06Rik|AW552143|D17Ertd403e|Tsg|Twg	twisted gastrulation homolog 1 (Drosophila)	protein-coding
common_peak2-28322-23-23-0.136805003787924-0.340939137447793	chr4	133672094	133673344	+	0	NA	intron (NR_045571, intron 8 of 13)	intron (NR_045571, intron 8 of 13)	11949	NM_080559	73723	Mm.22240	NM_080559	ENSMUSG00000028843	Sh3bgrl3	1110004L05Rik|AU022188	SH3 domain binding glutamic acid-rich protein-like 3	protein-coding
unique_peak2-36674-11-18--0.739233929191972-0.671582559449692	chr3	30980305	30981019	+	0	NA	Intergenic	B4A|SINE|B4	-13318	NM_011386	20482	Mm.15406	NM_011386	ENSMUSG00000027660	Skil	Skir|SnoN|sno	SKI-like	protein-coding
common_peak2-28001-24-51--0.907229815373375-1.77636329975052	chr4	45513153	45514737	+	0	NA	intron (NM_001033306, intron 1 of 5)	intron (NM_001033306, intron 1 of 5)	29755	NM_001033306	230126	Mm.251716	NM_001033306	ENSMUSG00000044813	Shb	BC028832	src homology 2 domain-containing transforming protein B	protein-coding
common_peak1-14052-20-14-0.581184188982674-0.690311289528838	chr2	119288718	119289480	+	0	NA	intron (NM_026574, intron 1 of 35)	B1_Mus2|SINE|Alu	14266	NM_026574	68142	Mm.330496	NM_026574	ENSMUSG00000034154	Ino80	2310079N15Rik|4632409L19Rik|Inoc1	INO80 homolog (S. cerevisiae)	protein-coding
unique_peak1-30-6-0-2.5653981103803-2.10720996964787	chr1	12564742	12565134	+	0	NA	Intergenic	Intergenic	-92706	NR_045297	329096	Mm.417782	NR_045297	ENSMUSG00000097171	Gm17644	4932411L15	predicted gene, 17644	ncRNA
unique_peak2-33439-4-12--1.72390023199434-1.85743853830261	chr11	61493531	61494057	+	0	NA	intron (NM_001033227, intron 10 of 15)	RMER19B|LTR|ERVK	-4118	NM_178618	69640	Mm.458559	NM_178618	ENSMUSG00000042377	Fam83g	2310040C09Rik|AI506990|wly	family with sequence similarity 83, member G	protein-coding
common_peak1-8745-9-8-0.0196884049619079-1.03275496310833	chr11	4265176	4265696	+	0	NA	intron (NM_029458, intron 10 of 10)	Lx8|LINE|L1	75649	NM_029458	75828	Mm.159592	NM_029458	ENSMUSG00000020419	Hormad2	4930529M09Rik	HORMA domain containing 2	protein-coding
unique_peak2-36576-5-5--0.289342836727009-0.909929411522249	chr2	173658817	173659224	+	0	NA	Intergenic	Intergenic	95948	NM_019806	56491	Mm.260456	NM_019806	ENSMUSG00000054455	Vapb	AI225786|AI840687|AI848259|D2Abb2e|R75548|VAP33b|Vamp33b	vesicle-associated membrane protein, associated protein B and C	protein-coding
unique_peak2-32447-8-11--0.579740082773585-1.14218153353838	chr1	4785242	4785769	+	0	NA	Intergenic	RMER19B|LTR|ERVK	-9698	NM_025300	27395	Mm.182927	NM_025300	ENSMUSG00000033845	Mrpl15	HSPC145|MRP-L7|Rpml7	mitochondrial ribosomal protein L15	protein-coding
unique_peak1-4104-42-6-2.93497440580958-9.8919252452264	chr2	75771977	75773558	+	0	NA	Intergenic	Intergenic	3752	NM_028235	72421	Mm.275109	NM_028235	ENSMUSG00000075273	Ttc30b	2510042P03Rik|Tcc30b	tetratricopeptide repeat domain 30B	protein-coding
common_peak2-19954-19-27--0.404667595395917-0.464317215211849	chr1	132138421	132139817	+	0	NA	Intergenic	Intergenic	180457	NM_007827	13137	Mm.436759	NM_007827	ENSMUSG00000026401	Daf2	AI323748|Cd55b|Daf|Daf-TM|TM-DAF	decay accelerating factor 2	protein-coding
common_peak1-14858-27-17-0.821620949452924-1.31432283146954	chr3	95177261	95178501	+	0	NA	Intergenic	Intergenic	-16757	NM_001163642	84505	Mm.490259	NM_018877	ENSMUSG00000015697	Setdb1	AU022152|ESET|KMT1E|mKIAA0067	SET domain, bifurcated 1	protein-coding
common_peak2-22887-12-15--0.351224014912361-0.332077462497413	chr14	31669351	31669871	+	0	NA	intron (NM_028839, intron 1 of 7)	B1_Mus2|SINE|Alu	-22832	NM_181390	66175	Mm.220895	NM_181390	ENSMUSG00000042485	Mustn1	1110028G01Rik|Mustang	musculoskeletal, embryonic nuclear protein 1	protein-coding
unique_peak2-32914-3-20--2.80630051273804-3.35694334496952	chr10	22734925	22735748	+	0	NA	Intergenic	Intergenic	-195402	NM_011545	21412	Mm.16497	NM_011545	ENSMUSG00000045680	Tcf21	Pod-1|Pod1|bHLHa23|capsulin|epc|epicardin	transcription factor 21	protein-coding
common_peak1-17653-24-11-1.20824740204656-1.9654245668484	chr7	58823304	58824518	+	0	NA	intron (NM_001271879, intron 11 of 20)	intron (NM_001271879, intron 11 of 20)	-53289	NM_080853	140919	Mm.256618	NM_080853	ENSMUSG00000030500	Slc17a6	2900073D12Rik|DNPI|VGLUT2	solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6	protein-coding
common_peak2-29888-21-17-0.399564263823923-0.561823156887258	chr6	113037169	113037730	+	0	NA	intron (NM_028385, intron 1 of 21)	intron (NM_028385, intron 1 of 21)	9816	NM_028385	72895	Mm.367159	NM_028385	ENSMUSG00000034269	Setd5	2900045N06Rik|C330007C20|C85544|mKIAA1757	SET domain containing 5	protein-coding
unique_peak1-520-6-2-0.980435609659146-1.26211192963361	chr1	184026464	184026897	+	0	NA	Intergenic	Intergenic	-28188	NM_012058	27058	Mm.303071	NM_012058	ENSMUSG00000026511	Srp9	9kDa	signal recognition particle 9	protein-coding
common_peak1-10592-8-8--0.164702583494742-1.00793137938329	chr14	30951383	30951853	+	0	NA	intron (NM_001083616, intron 9 of 46)	intron (NM_001083616, intron 9 of 46)	115799	NM_175343	218865	Mm.259916	NM_172264	ENSMUSG00000015970	Chdh	AU041472|D630034H06Rik	choline dehydrogenase	protein-coding
common_peak1-12003-10-3-1.35641534500877-1.75805390616669	chr17	13700887	13701476	+	0	NA	intron (NR_045437, intron 2 of 3)	intron (NR_045437, intron 2 of 3)	-13141	NR_030763	272667	Mm.444718	NR_030763	ENSMUSG00000079711	Smok4a	4930513D10Rik|Smok2c	sperm motility kinase 4A	pseudo
unique_peak1-3879-19-1-3.40268732666169-5.15699611159533	chr2	13491892	13492571	+	0	NA	Intergenic	Intergenic	-3707	NM_011701	22352	Mm.268000	NM_011701	ENSMUSG00000026728	Vim	-	vimentin	protein-coding
common_peak1-17121-33-8-2.16141256108322-5.35800994256093	chr6	115476642	115477874	+	0	NA	Intergenic	Intergenic	-17464	NM_199033	381802	Mm.291208	NM_199033	ENSMUSG00000042389	Tsen2	AU067695	tRNA splicing endonuclease 2 homolog (S. cerevisiae)	protein-coding
unique_peak2-37790-6-5--0.0195643903408542-0.947717972411649	chr5	121619124	121619550	+	0	NA	intron (NM_011202, intron 2 of 15)	RSINE1|SINE|B4	22069	NM_001109992	19247	Mm.8681	NM_011202	ENSMUSG00000043733	Ptpn11	2700084A17Rik|AW536184|PTP1D|PTP2C|SAP-2|SH-PTP2|SH-PTP3|SHP-2|Shp2|Syp	protein tyrosine phosphatase, non-receptor type 11	protein-coding
unique_peak1-2912-8-4-0.683294323060208-1.21878474469819	chr17	47276413	47276930	+	0	NA	Intergenic	GC_rich|Low_complexity|Low_complexity	-1220	NM_001097623	224829	Mm.260989	NM_172622	ENSMUSG00000064043	Trerf1	9430096I18Rik|AI429294|B830015H24|RAPA|Trep-132|Trep132	transcriptional regulating factor 1	protein-coding
common_peak2-22976-24-30--0.160986407619158-0.316008636696545	chr14	54894146	54894685	+	0	NA	Intergenic	ORR1D2|LTR|MaLR	8185	NM_010991	18348	Mm.436623	NM_010991	ENSMUSG00000048153	Olfr49	IC6|MOR1181	olfactory receptor 49	protein-coding
common_peak1-14651-21-15-0.569489265266236-0.756118839439552	chr3	57411466	57412498	+	0	NA	Intergenic	Intergenic	-32150	NM_001168281	97064	Mm.405029	NM_133784	ENSMUSG00000027803	Wwtr1	2310058J06Rik|2610021I22Rik|C78399|Taz	WW domain containing transcription regulator 1	protein-coding
unique_peak1-2439-22-8-1.47735910364509-2.29727994934156	chr15	101523495	101524732	+	0	NA	intron (NM_008476, intron 1 of 8)	intron (NM_008476, intron 1 of 8)	623	NM_008476	16687	Mm.302399	NM_008476	ENSMUSG00000058354	Krt6a	2310016L08Rik|Krt2-6a|Krt2-6c|MK6a|mK6[a]	keratin 6A	protein-coding
unique_peak1-2911-7-10--0.660340788339108-1.12966497611638	chr17	47059748	47060215	+	0	NA	intron (NM_008938, intron 2 of 2)	intron (NM_008938, intron 2 of 2)	12547	NM_008938	19133	Mm.291370	NM_008938	ENSMUSG00000023978	Prph2	AOFMD|AVMD|Nmf193|PRPH|RP7|Rd-2|Rd2|Rds|Tspan22|rds	peripherin 2	protein-coding
unique_peak2-32549-6-16--1.52206473087004-1.32521814697968	chr1	72428380	72428995	+	0	NA	intron (NM_009533, intron 17 of 20)	intron (NM_009533, intron 17 of 20)	74692	NM_009533	22596	Mm.246952	NM_009533	ENSMUSG00000026187	Xrcc5	AI314015|Ku80|Ku86	X-ray repair complementing defective repair in Chinese hamster cells 5	protein-coding
common_peak2-29802-35-23-0.846407757741348-1.63799378205027	chr6	91016785	91017619	+	0	NA	intron (NM_018815, intron 13 of 39)	B3A|SINE|B2	49618	NM_018815	54563	Mm.28162	NM_018815	ENSMUSG00000030091	Nup210	9830001L10|AI836801|Pom210|gp190|gp210	nucleoporin 210	protein-coding
unique_peak1-6270-13-8-0.608547029195456-0.660903317613904	chr7	25432754	25433342	+	0	NA	Intergenic	B2_Mm2|SINE|B2	11459	NM_133743	72434	Mm.281093	NM_133743	ENSMUSG00000057454	Lypd3	2310061G07Rik|C4.4a	Ly6/Plaur domain containing 3	protein-coding
common_peak2-27650-12-11-0.0638134843664826-0.337263207250336	chr3	108014424	108014890	+	0	NA	TTS (NM_008596)	TTS (NM_008596)	-1212	NM_175183	72522	Mm.187326	NM_175183	ENSMUSG00000048997	Atxn7l2	2610528J18Rik	ataxin 7-like 2	protein-coding
unique_peak1-2790-8-1-2.00522241794757-2.05605744720049	chr17	13564108	13564575	+	0	NA	intron (NM_001167578, intron 10 of 11)	L1Md_F2|LINE|L1	16903	NM_001167578	100041352	Mm.490251	NM_001167578	ENSMUSG00000052469	Tcp10c	D17Leh66C|D17Leh66ca|Gm9880|T66C-a|Tcp-10c	t-complex protein 10c	protein-coding
unique_peak1-7062-17-10-0.75886471956774-0.917676348953458	chr9	13441176	13442261	+	0	NA	intron (NM_001013813, intron 1 of 3)	intron (NM_001013813, intron 1 of 3)	17285	NM_001013813	270118	Mm.116898	NM_173776	ENSMUSG00000031925	Maml2	5930431H10|BC032967	mastermind like 2 (Drosophila)	protein-coding
common_peak2-22090-10-10--0.103016273628528-0.301029995663987	chr12	79599800	79600487	+	0	NA	intron (NM_145965, intron 8 of 22)	Lx7|LINE|L1	-192379	NM_027597	70897	Mm.56514	NM_027597	ENSMUSG00000056987	Fam71d	4921509E07Rik|4930516C23Rik|GARI-L2	family with sequence similarity 71, member D	protein-coding
common_peak1-11396-42-43-0.282897709229887-0.572487971606918	chr15	98092593	98094034	+	0	NA	Intergenic	ORR1A2|LTR|MaLR	-5575	NM_027304	70069	Mm.107718	NM_027304	ENSMUSG00000048077	H1fnt	1700026P10Rik|H1t2|Hanp1|mH1t2	H1 histone family, member N, testis-specific	protein-coding
unique_peak2-36115-3-14--2.3208736855678-2.58603100924543	chr2	3657860	3658468	+	0	NA	intron (NM_025626, intron 1 of 3)	intron (NM_025626, intron 1 of 3)	27434	NM_025626	66540	Mm.277864	NM_025626	ENSMUSG00000026655	Fam107b	3110001A13Rik|AA589595|AA959793|AI132312	family with sequence similarity 107, member B	protein-coding
common_peak2-21287-21-13-0.762134343208631-1.0220094258199	chr11	70579782	70580262	+	0	NA	intron (NM_177565, intron 1 of 1)	intron (NM_177565, intron 1 of 1)	2073	NM_177565	193043	Mm.40966	NM_177565	ENSMUSG00000043602	Zfp3	AI854635|B230309J24|Fnp-1|Zfp-3	zinc finger protein 3	protein-coding
common_peak1-13811-15-11-0.4272022498345-0.503257505534083	chr2	50877954	50878748	+	0	NA	Intergenic	Intergenic	113147	NR_033595	227885	Mm.301654	NR_033595	ENSMUSG00000083270	Gm13498	OTTMUSG00000012426	heat shock protein 90 alpha (cytosolic), class B member 1 pseudogene	pseudo
common_peak1-12589-78-107-0.0519335919970665-0.325820647467598	chr18	21000814	21003010	+	0	NA	intron (NM_177038, intron 18 of 28)	ID|SINE|ID	52667	NM_177038	75964	Mm.273769	NM_029491	ENSMUSG00000033382	Trappc8	5033403J15Rik|AI845423|D030074E01Rik|Trs85|mKIAA1012	trafficking protein particle complex 8	protein-coding
common_peak2-22854-13-7-0.778472030637769-0.817533494790411	chr14	25708863	25709285	+	0	NA	Intergenic	Intergenic	253653	NR_045718	75862	Mm.109191	NR_045718		4930572O13Rik	-	RIKEN cDNA 4930572O13 gene	ncRNA
common_peak2-27600-48-66--0.0951620392229575-0.316181169053401	chr3	103020547	103021405	+	0	NA	Intergenic	Intergenic	45342	NM_026602	68183	Mm.104919	NM_026602	ENSMUSG00000005687	Bcas2	6430539P16Rik|AI132645|C76366|C80030	breast carcinoma amplified sequence 2	protein-coding
common_peak2-29314-11-11--0.0762689164695427-0.301029995663976	chr5	146678985	146679477	+	0	NA	intron (NM_007818, intron 7 of 12)	intron (NM_007818, intron 7 of 12)	12199	NM_007818	13112	Mm.332844	NM_007818	ENSMUSG00000056035	Cyp3a11	AI256190|Cyp3a|IIIAm1|Pcn	cytochrome P450, family 3, subfamily a, polypeptide 11	protein-coding
unique_peak2-34890-4-12--1.72390023199434-1.85743853830261	chr15	80674032	80674569	+	0	NA	intron (NM_177124, intron 1 of 21)	intron (NM_177124, intron 1 of 21)	45260	NM_177124	213988	Mm.131328	NM_144812	ENSMUSG00000047888	Tnrc6b	2700090M07Rik|A730065C02Rik|AI848765|D230019K20Rik	trinucleotide repeat containing 6b	protein-coding
unique_peak2-33440-0-5--3.42509343119537-1.32905871926422	chr11	61542163	61542492	+	0	NA	TTS (NM_001164242)	TTS (NM_001164242)	-8026	NM_001033227	109342	Mm.441070	NM_001033227	ENSMUSG00000042371	Slc5a10	C330021F16Rik|SGLT5	solute carrier family 5 (sodium/glucose cotransporter), member 10	protein-coding
common_peak2-28964-10-9-0.0344872501214071-1.05503135781948	chr5	103738455	103738846	+	0	NA	Intergenic	Intergenic	-10602	NR_040699	74624	Mm.389662	NR_040699		4930429D17Rik	-	RIKEN cDNA 4930429D17 gene	ncRNA
common_peak1-10406-21-17-0.399564263823923-0.561823156887258	chr13	98120093	98120834	+	0	NA	Intergenic	Intergenic	-84462	NR_110432	100039691	Mm.219358	NR_110430		Lincenc1	ENSMUSG00000078952|Gm11019|Gm2373|linc-Enc1	long intergenic non-coding RNA, embryonic stem cells expressed 1	ncRNA
unique_peak1-4076-7-3-0.799090830298189-1.23214870625617	chr2	69378209	69378703	+	0	NA	intron (NM_001081088, intron 4 of 78)	intron (NM_001081088, intron 4 of 78)	45668	NM_001081088	14725	Mm.23847	NM_001081088	ENSMUSG00000027070	Lrp2	AI315343|AW536255|D230004K18Rik|Gp330|Megalin|b2b1625.2Clo	low density lipoprotein receptor-related protein 2	protein-coding
common_peak2-22884-11-5-0.923731083530457-1.477227296591	chr14	31494722	31495034	+	0	NA	intron (NM_177815, intron 10 of 12)	L1M5|LINE|L1	27317	NM_177815	328370	Mm.259657	NM_177815	ENSMUSG00000052395	Rft1	D930025H04	RFT1 homolog (S. cerevisiae)	protein-coding
common_peak2-29535-15-10-0.552733131918359-0.604422558181019	chr6	38809824	38810492	+	0	NA	intron (NM_001294144, intron 1 of 14)	intron (NM_001294144, intron 1 of 14)	16031	NM_010433	15258	Mm.23790	NM_010433	ENSMUSG00000061436	Hipk2	1110014O20Rik|B230339E18Rik|Stank	homeodomain interacting protein kinase 2	protein-coding
common_peak1-12636-102-159--0.0508396180478083-0.318374762218914	chr18	34859246	34861990	+	0	NA	intron (NM_010280, intron 3 of 7)	intron (NM_010280, intron 3 of 7)	19423	NM_010280	14587	Mm.16520	NM_010280	ENSMUSG00000024366	Gfra3	GFRalpha3|Y15110	glial cell line derived neurotrophic factor family receptor alpha 3	protein-coding
common_peak2-26590-32-93--1.27549683245798-5.24166439368678	chr2	109693199	109694733	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-37069	NM_011699	22343	Mm.235300	NM_011699	ENSMUSG00000027162	Lin7c	9130007B12Rik|AI303698|AU019331|AW125731|D2Ertd520e|LIN-7-C|LIN-7C|MALS-3|Veli3	lin-7 homolog C (C. elegans)	protein-coding
common_peak1-19487-14-20--0.493101262421116-0.456667090758524	chrX	151047412	151048218	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-33942	NM_001037167	434881	Mm.357614	NM_001037167	ENSMUSG00000072888	Samt2	EG434881|Gm5647	spermatogenesis associated multipass transmembrane protein 2	protein-coding
common_peak2-27837-5-13--1.51173525806346-1.78669045979184	chr3	152114306	152114983	+	0	NA	intron (NM_001287139, intron 10 of 13)	intron (NM_001287139, intron 10 of 13)	54996	NM_001287139	108946	Mm.379292	NM_198416	ENSMUSG00000039068	Zzz3	3110065C23Rik|6430567E01Rik|AA408566|AI481057|AW556059|R75514	zinc finger, ZZ domain containing 3	protein-coding
common_peak1-17663-29-22-0.588728124558098-0.950553505527076	chr7	64249634	64250780	+	0	NA	intron (NM_008074, intron 3 of 9)	Lx5|LINE|L1	392034	NM_008074	14407	Mm.434343	NM_008074		Gabrg3	B230362M20Rik|Gabrg-3	gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3	protein-coding
common_peak2-29475-7-6--0.00826409175941478-0.97990265578305	chr6	30459686	30460029	+	0	NA	promoter-TSS (NM_178625)	promoter-TSS (NM_178625)	8	NM_027073	75647	Mm.46117	NM_027073	ENSMUSG00000029784	Ssmem1	1700016K02Rik|1700025E21Rik	serine-rich single-pass membrane protein 1	protein-coding
common_peak2-26084-118-140-0.384241330723781-1.6025697125596	chr2	148043488	148047237	+	0	NA	Intergenic	Intergenic	-172657	NM_010446	15376	Mm.938	NM_010446	ENSMUSG00000037025	Foxa2	HNF3-beta|HNF3beta|Hnf-3b|Hnf3b|Tcf-3b|Tcf3b	forkhead box A2	protein-coding
unique_peak1-7212-18-9-0.990991056340989-1.23014042908325	chr9	70048012	70048828	+	0	NA	Intergenic	Intergenic	-6737	NM_181072	71602	Mm.249311	NM_181072	ENSMUSG00000032220	Myo1e	2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3	myosin IE	protein-coding
common_peak1-14997-35-40-0.0738182538444203-0.324581211600972	chr3	108553689	108554920	+	0	NA	intron (NM_177859, intron 1 of 11)	intron (NM_177859, intron 1 of 11)	11728	NM_177859	329738	Mm.72322	NM_177859	ENSMUSG00000049565	Aknad1	4921525H12Rik	AKNA domain containing 1	protein-coding
common_peak2-30092-63-93--0.116276260607048-0.344467489921244	chr6	134919440	134921663	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-11468	NM_001109914	381823	Mm.296104	NM_001109914	ENSMUSG00000090698	Apold1	Gm1075	apolipoprotein L domain containing 1	protein-coding
common_peak1-7750-36-39-0.157392991280392-0.394172396164276	chr1	91022694	91024061	+	0	NA	intron (NM_133816, intron 2 of 5)	intron (NM_133816, intron 2 of 5)	56340	NM_133816	98402	Mm.170983	NM_133816		Sh3bp4	AI594717|AW227605|BOG25	SH3-domain binding protein 4	protein-coding
unique_peak2-36921-2-6--1.72480917832092-1.26211192963361	chr3	101048511	101048813	+	0	NA	Intergenic	Intergenic	43200	NM_013486	12481	Mm.22842	NM_013486	ENSMUSG00000027863	Cd2	LFA-2|Ly-37|Ly37	CD2 antigen	protein-coding
unique_peak2-33813-7-8--0.370834171144123-1.00793137938329	chr12	55836230	55836698	+	0	NA	Intergenic	B3|SINE|B2	-39612	NM_025456	66266	Mm.156440	NM_025456	ENSMUSG00000054302	Eapp	1810011O16Rik	E2F-associated phosphoprotein	protein-coding
unique_peak2-33820-8-8--0.164702583494742-1.00793137938329	chr12	4082521	4082967	+	0	NA	5' UTR (NM_153082, exon 1 of 7)	5' UTR (NM_153082, exon 1 of 7)	170	NM_153082	217378	Mm.271656	NM_153082	ENSMUSG00000020657	Dnajc27	AI639580|C330021A05Rik|Rabj|Rbj	DnaJ (Hsp40) homolog, subfamily C, member 27	protein-coding
common_peak1-12379-113-19-3.12674165080935-31.6952904862178	chr17	66267975	66271311	+	0	NA	Intergenic	Intergenic	30884	NM_023053	65960	Mm.10153	NM_023053	ENSMUSG00000024098	Twsg1	1810013J15Rik|9030422N06Rik|AW552143|D17Ertd403e|Tsg|Twg	twisted gastrulation homolog 1 (Drosophila)	protein-coding
common_peak1-14873-13-16--0.30899081061257-0.330004445983672	chr3	95693949	95694531	+	0	NA	intron (NM_153513, intron 1 of 4)	intron (NM_153513, intron 1 of 4)	1613	NM_153513	229600	Mm.89556	NM_153513	ENSMUSG00000038543	BC028528	L259	cDNA sequence BC028528	protein-coding
common_peak1-18505-12-11-0.0638134843664826-0.337263207250336	chr8	86922318	86922835	+	0	NA	Intergenic	MTB|LTR|MaLR	-16687	NM_001252060	12286	Mm.334658	NM_007578	ENSMUSG00000034656	Cacna1a	APCA|BI|Caca1a|Cacnl1a4|Cav2.1|Ccha1a|EA2|FHM|HPCA|MHP|MHP1|SCA6|alpha1A|la|nmf352|rkr|tg	calcium channel, voltage-dependent, P/Q type, alpha 1A subunit	protein-coding
common_peak1-16909-14-13-0.0918612383000403-0.332077462497413	chr6	72544236	72545054	+	0	NA	intron (NM_001253692, intron 2 of 11)	intron (NM_001253692, intron 2 of 11)	3762	NM_144917	232089	Mm.167232	NM_144917	ENSMUSG00000056698	Elmod3	AI844780|C330008I15Rik|RBM29|Rbed1	ELMO/CED-12 domain containing 3	protein-coding
common_peak1-19051-9-5-0.604650905683064-1.21398586181642	chr9	66171793	66172282	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-26220	NM_145617	235439	Mm.244179	NM_145617	ENSMUSG00000038664	Herc1	2810449H11Rik|B230218H07|D130015N03Rik|tbl	hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1	protein-coding
unique_peak2-38294-2-10--2.37688587490062-2.09384600808989	chr6	135187117	135187697	+	0	NA	TTS (NM_010352)	TTS (NM_010352)	10495	NM_001080552	14840	Mm.272306	NM_010352	ENSMUSG00000030206	Gsg1	-	germ cell-specific gene 1	protein-coding
unique_peak2-35646-4-6--0.830815435910851-0.989110657569874	chr18	8126364	8126780	+	0	NA	Intergenic	Intergenic	257377	NM_153085	225131	Mm.204524	NM_153085	ENSMUSG00000024283	Wac	1110067P07Rik|A230035H12Rik|AI256735|AI256776|Wwp4	WW domain containing adaptor with coiled-coil	protein-coding
common_peak2-31003-10-7-0.356415345008769-1.12966497611638	chr8	10647737	10648202	+	0	NA	Intergenic	Intergenic	234485	NR_040705	320014	Mm.403203	NR_040705		B930025P03Rik	-	RIKEN cDNA B930025P03 gene	ncRNA
common_peak2-22023-16-20--0.274053780510699-0.353907621462756	chr12	59066905	59067659	+	0	NA	Intergenic	L1_Mus2|LINE|L1	-245509	NM_009216	20605	Mm.278336	NM_009216		Sstr1	SRIF-2|SS-1-R|SS1-R|SS1R|Smstr-1|Smstr1|sst1	somatostatin receptor 1	protein-coding
common_peak1-7914-12-13--0.158578936969966-0.301029995663979	chr1	136685615	136686217	+	0	NA	intron (NM_001081307, intron 18 of 23)	RMER1B|Other|Other	14382	NR_015606	329251	Mm.188709	NM_001081307	ENSMUSG00000073557	Ppp1r12b	1810037O03Rik|9530009M10Rik|AI132431|Mypt2	protein phosphatase 1, regulatory (inhibitor) subunit 12B	protein-coding
common_peak1-15511-42-39-0.420401232979821-0.828688081372012	chr4	116684915	116685832	+	0	NA	Intergenic	Intergenic	-6640	NM_175135	108067	Mm.34612	NM_175135	ENSMUSG00000028683	Eif2b3	1190002P15Rik	eukaryotic translation initiation factor 2B, subunit 3	protein-coding
common_peak1-8730-68-110--0.22445508705181-0.53957546019573	chr11	3201791	3203329	+	0	NA	intron (NR_045109, intron 3 of 3)	intron (NR_045109, intron 3 of 3)	-6443	NR_045708	100302648	Mm.458664	NR_045708	ENSMUSG00000084941	Gm11944	OTTMUSG00000005017	predicted gene 11944	ncRNA
common_peak2-26183-16-23--0.466698858453094-0.497202060940027	chr2	24934534	24935190	+	0	NA	promoter-TSS (NM_028093)	promoter-TSS (NM_028093)	-981	NM_028093	72090	Mm.33403	NM_028093	ENSMUSG00000036813	Entpd8	-	ectonucleoside triphosphate diphosphohydrolase 8	protein-coding
common_peak2-22755-14-19--0.422711934529718-0.403453972741636	chr13	113793966	113794407	+	0	NA	Intergenic	L1Md_F|LINE|L1	10110	NM_001037914	622408	Mm.360976	NM_001037914	ENSMUSG00000074651	Mcidas	EG622408|Gm6320|Idas|Mci|Mcin	multiciliate differentiation and DNA synthesis associated cell cycle protein	protein-coding
common_peak1-9963-27-64--1.03082186213322-2.66218884881338	chr12	112673537	112674479	+	0	NA	Intergenic	Intergenic	-6864	NM_009396	21928	Mm.255332	NM_009396	ENSMUSG00000021281	Tnfaip2	B94|Exoc3l3|M-sec|Tnfip2|tnfb94	tumor necrosis factor, alpha-induced protein 2	protein-coding
unique_peak1-7213-16-6-1.31090872021046-1.49151883326344	chr9	70052966	70053959	+	0	NA	Intergenic	Intergenic	-1695	NM_181072	71602	Mm.249311	NM_181072	ENSMUSG00000032220	Myo1e	2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3	myosin IE	protein-coding
common_peak2-20052-10-20--1.03590207776999-1.03889213727317	chr1	150099906	150100533	+	0	NA	Intergenic	L1Md_F2|LINE|L1	1708195	NM_008869	18783	Mm.4186	NM_008869	ENSMUSG00000056220	Pla2g4a	Pla2g4|cPLA2|cPLA2alpha	phospholipase A2, group IVA (cytosolic, calcium-dependent)	protein-coding
common_peak1-9777-34-23-0.79710602628011-1.52482195715361	chr12	56528177	56529682	+	0	NA	Intergenic	RSINE1|SINE|B4	29117	NM_011968	26443	Mm.30210	NM_011968	ENSMUSG00000021024	Psma6	IOTA	proteasome (prosome, macropain) subunit, alpha type 6	protein-coding
common_peak1-14922-18-32--0.731474968130102-0.907815120698057	chr3	100161906	100162833	+	0	NA	Intergenic	Intergenic	-67959	NR_040543	73806	Mm.396549	NR_040543	ENSMUSG00000086923	4930406D18Rik	-	RIKEN cDNA 4930406D18 gene	ncRNA
unique_peak2-40003-3-8--1.58390809140159-1.39487600375387	chrX	169879540	169880048	+	0	NA	Intergenic	Intergenic	-3462945	NR_029457	654820	Mm.34441	NM_001039559	ENSMUSG00000072844	G530011O06Rik	-	RIKEN cDNA G530011O06 gene	ncRNA
common_peak2-29075-22-22-0.123722149030391-0.342639663781856	chr5	118449401	118449941	+	0	NA	intron (NM_145564, intron 9 of 11)	intron (NM_145564, intron 9 of 11)	22892	NM_145564	231670	Mm.21912	NM_145564	ENSMUSG00000032898	Fbxo21	2810425J22Rik|AU016673|mKIAA0875	F-box protein 21	protein-coding
unique_peak2-35701-6-17--1.60452689106201-1.49151883326343	chr18	26005665	26006418	+	0	NA	Intergenic	Intergenic	-93557	NM_001174074	108013	Mm.266435	NM_133195	ENSMUSG00000024268	Celf4	A230070D14Rik|BRUNOL-4|Brul4|Brunol4|C130060B05Rik	CUGBP, Elav-like family member 4	protein-coding
unique_peak2-34862-2-5--1.50241675698448-1.08602067057793	chr15	77221216	77221482	+	0	NA	intron (NM_029419, intron 5 of 5)	intron (NM_029419, intron 5 of 5)	8191	NM_029419	75761	Mm.232636	NM_029419	ENSMUSG00000010601	Apol7a	9130022K13Rik|Apol3	apolipoprotein L 7a	protein-coding
common_peak2-21270-17-30--0.735899972181837-0.841847921495509	chr11	69846611	69847370	+	0	NA	intron (NM_001109752, intron 8 of 19)	B1F1|SINE|Alu	14883	NM_007864	13385	Mm.27256	NM_007864	ENSMUSG00000020886	Dlg4	Dlgh4|PSD-95|PSD95|SAP90|SAP90A	discs, large homolog 4 (Drosophila)	protein-coding
unique_peak2-32970-8-13--0.802132504110034-0.562038191119711	chr10	53595884	53596672	+	0	NA	Intergenic	L1MA4|LINE|L1	-125563	NM_001081428	75906	Mm.436785	NM_001081428	ENSMUSG00000019856	Fam184a	3110012E06Rik|4930438C08Rik|4930589M24Rik	family with sequence similarity 184, member A	protein-coding
common_peak2-20108-23-32--0.322626614849373-0.436052471002795	chr1	160906197	160907264	+	0	NA	Intergenic	MuRRS4-int|LTR|ERV1	-19161	NM_001085376	23850	Mm.458621	NM_001085376	ENSMUSG00000073530	Pappa2	PAPP-A2|PLAC3|Pappe	pappalysin 2	protein-coding
unique_peak1-4497-15-6-1.20480982849805-1.32521814697968	chr3	8976294	8976949	+	0	NA	intron (NM_009412, intron 1 of 5)	URR1B|DNA|MER1_type	-12567	NM_001025261	21985	Mm.371590	NM_009412	ENSMUSG00000027506	Tpd52	AI043038|mD52	tumor protein D52	protein-coding
common_peak2-29108-22-18-0.399356591643819-0.549581527953406	chr5	122987851	122988746	+	0	NA	Intergenic	Intergenic	-36064	NR_027838	11938	Mm.227583	NM_009722	ENSMUSG00000029467	Atp2a2	9530097L16Rik|D5Wsu150e|SERCA2|SERCA2B|mKIAA4195	ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	protein-coding
common_peak1-10135-7-5-0.214128329577033-1.01466476204226	chr13	33051815	33052314	+	0	NA	Intergenic	Lx3C|LINE|L1	-5318	NM_011454	20708	Mm.36526	NM_011454	ENSMUSG00000042842	Serpinb6b	NK13|Spi12|ovalbumin	serine (or cysteine) peptidase inhibitor, clade B, member 6b	protein-coding
unique_peak1-2009-40-11-2.07401318202994-6.3780034956743	chr15	5514135	5515445	+	0	NA	intron (NR_045274, intron 2 of 4)	L1Md_F2|LINE|L1	68472	NR_045274	71432	Mm.291087	NR_045274		5430437J10Rik	-	RIKEN cDNA 5430437J10 gene	ncRNA
common_peak1-10696-19-17-0.232762325219374-0.392630012299441	chr14	56777649	56778653	+	0	NA	intron (NM_010375, intron 1 of 4)	intron (NM_010375, intron 1 of 4)	265	NM_010375	14944	Mm.14868	NM_010375	ENSMUSG00000040284	Gzmg	Ctla-7|Ctla7	granzyme G	protein-coding
common_peak2-27592-13-9-0.456543935750406-0.53895475198017	chr3	102715288	102715718	+	0	NA	intron (NM_011516, intron 15 of 32)	B1_Mus1|SINE|Alu	24520	NM_011516	20957	Mm.243849	NM_011516	ENSMUSG00000027855	Sycp1	SCP1	synaptonemal complex protein 1	protein-coding
common_peak1-12615-18-36--0.896534214400599-1.30767018140165	chr18	31910345	31911289	+	0	NA	Intergenic	L1_Mus4|LINE|L1	-8661	NM_153515	225339	Mm.290804	NM_153515	ENSMUSG00000041915	Ammecr1l	5430429D03Rik|AU022236|AU040755|AW111353|E230022H04Rik	AMME chromosomal region gene 1-like	protein-coding
common_peak2-29433-75-95-0.154104491022129-0.455919206328062	chr6	11925170	11926748	+	0	NA	intron (NM_001168382, intron 7 of 17)	L1_Mus1|LINE|L1	50078	NM_001168382	75725	Mm.212411	NM_029404	ENSMUSG00000029629	Phf14	1110001C23Rik|4932409F11Rik|5730446A07Rik|AA623952|AV297001|mKIAA0783	PHD finger protein 14	protein-coding
common_peak2-29079-13-19--0.543456064249594-0.466170754204149	chr5	120116261	120117030	+	0	NA	Intergenic	GA-rich|Low_complexity|Low_complexity	-4226	NM_198052	21386	Mm.219139	NM_011535	ENSMUSG00000018604	Tbx3	D5Ertd189e	T-box 3	protein-coding
unique_peak1-1760-14-4-1.57728806547028-2.4322161449009	chr13	109632369	109633161	+	0	NA	intron (NM_011056, intron 1 of 16)	intron (NM_011056, intron 1 of 16)	188394	NM_011056	238871	Mm.434429	NM_011056		Pde4d	9630011N22Rik|Dpde3	phosphodiesterase 4D, cAMP specific	protein-coding
common_peak2-32101-9-6-0.382258484346616-1.11707584880836	chr9	99569074	99569503	+	0	NA	3' UTR (NM_028258, exon 16 of 16)	3' UTR (NM_028258, exon 16 of 16)	39274	NM_028258	72507	Mm.221455	NM_028258	ENSMUSG00000037784	Dzip1l	2610524A10Rik|AI663976	DAZ interacting protein 1-like	protein-coding
unique_peak1-2212-11-5-0.923731083530457-1.477227296591	chr15	73146978	73147769	+	0	NA	intron (NM_007982, intron 7 of 31)	B3|SINE|B2	106248	NM_007982	14083	Mm.254494	NM_007982	ENSMUSG00000022607	Ptk2	FAK|FRNK|Fadk|mKIAA4203|p125FAK	PTK2 protein tyrosine kinase 2	protein-coding
unique_peak2-39962-4-10--1.48289213249054-1.5150158574804	chrX	141532769	141533349	+	0	NA	intron (NM_001033795, intron 2 of 6)	Lx3C|LINE|L1	250378	NM_178358	237091	Mm.135547	NM_178358	ENSMUSG00000041700	Lhfpl1	Lhfp	lipoma HMGIC fusion partner-like 1	protein-coding
common_peak2-21662-10-11--0.228547155712387-0.31137425193576	chr11	103067592	103068139	+	0	NA	intron (NM_001254724, intron 1 of 9)	ID_B1|SINE|B4	1997	NM_001254724	69441	Mm.380648	NM_027082	ENSMUSG00000020940	1700023F06Rik	-	RIKEN cDNA 1700023F06 gene	protein-coding
common_peak2-27520-14-28--0.958764834769927-1.16796998271031	chr3	95687216	95688289	+	0	NA	intron (NR_040446, intron 1 of 3)	B1_Mus2|SINE|Alu	-1601	NM_001033302	229599	Mm.331218	NM_001033302	ENSMUSG00000038550	Ciart	Chrono|Gm129	circadian associated repressor of transcription	protein-coding
common_peak2-22879-7-8--0.370834171144123-1.00793137938329	chr14	31403579	31403970	+	0	NA	Intergenic	Intergenic	18439	NR_037237	100526475		NR_037237		Mir3076	mmu-mir-3076	microRNA 3076	ncRNA
common_peak1-7716-16-32--0.926130477090392-1.31432283146954	chr1	87853305	87854033	+	0	NA	intron (NM_001033290, intron 1 of 1)	intron (NM_001033290, intron 1 of 1)	3961	NM_001033290	227326	Mm.244158	NM_001033290	ENSMUSG00000049608	Gpr55	Gm218|Lpir1	G protein-coupled receptor 55	protein-coding
unique_peak1-6799-9-3-1.18961340640422-1.57096726280955	chr8	70405426	70405997	+	0	NA	intron (NM_177698, intron 8 of 14)	intron (NM_177698, intron 8 of 14)	29134	NM_030263	234353	Mm.32525	NM_027626	ENSMUSG00000030465	Psd3	4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D	pleckstrin and Sec7 domain containing 3	protein-coding
common_peak2-27452-49-81--0.3512681815929-0.734823907009333	chr3	90265141	90266574	+	0	NA	intron (NM_008727, intron 5 of 21)	intron (NM_008727, intron 5 of 21)	3931	NM_008727	18160	Mm.4627	NM_008727	ENSMUSG00000027931	Npr1	AI893888|GC-A|NPR-A|NPRA|Pndr	natriuretic peptide receptor 1	protein-coding
common_peak2-29660-53-68-0.0324485556377594-0.315090980716576	chr6	71632067	71633767	+	0	NA	Intergenic	Intergenic	-24758	NM_178608	52250	Mm.146332	NM_178608	ENSMUSG00000052852	Reep1	D6Ertd253e	receptor accessory protein 1	protein-coding
unique_peak2-36739-6-11--1.01956439034085-1.32595962126035	chr3	57574076	57574626	+	0	NA	intron (NM_001113413, intron 3 of 9)	intron (NM_001113413, intron 3 of 9)	34363	NM_001113413	24017	Mm.274360	NM_011883	ENSMUSG00000036503	Rnf13	2010001H16Rik|Rzf	ring finger protein 13	protein-coding
unique_peak1-556-15-4-1.69023665566829-1.97518968347063	chr1	193547327	193548026	+	0	NA	intron (NM_001134829, intron 2 of 7)	intron (NM_001134829, intron 2 of 7)	5402	NM_001134829	226856	Mm.277958	NM_172266	ENSMUSG00000026623	Lpgat1	AI649174|AW112037|BC013667	lysophosphatidylglycerol acyltransferase 1	protein-coding
common_peak1-8618-7-23--1.78587167042297-2.25371873249797	chr10	117023850	117024326	+	0	NA	Intergenic	Intergenic	-42468	NM_027468	70574	Mm.339332	NM_027468	ENSMUSG00000020183	Cpm	1110060I01Rik|5730456K23Rik|AA589379|E030045M14Rik	carboxypeptidase M	protein-coding
unique_peak1-2758-11-4-1.18676548936425-1.68134727924692	chr17	5057445	5057941	+	0	NA	intron (NM_001085355, intron 2 of 19)	intron (NM_001085355, intron 2 of 19)	62619	NM_001085355	239985	Mm.133401	NM_001085355	ENSMUSG00000069729	Arid1b	8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235	AT rich interactive domain 1B (SWI-like)	protein-coding
unique_peak2-39525-3-22--2.93754504601629-3.8429424127101	chr9	65580309	65580898	+	0	NA	intron (NM_172536, intron 2 of 9)	B3A|SINE|B2	56248	NM_001301307	18247	Mm.116749	NM_010952	ENSMUSG00000040652	Oaz2	AZ-2|AZ2|Oaz2-ps|Sez15	ornithine decarboxylase antizyme 2	protein-coding
unique_peak1-6492-10-3-1.35641534500877-1.75805390616669	chr7	113171569	113172060	+	0	NA	Intergenic	Intergenic	49564	NR_030720	668128	Mm.484022	NR_030720		Gm8989	EG668128|Gm21911	very large inducible GTPase 1 pseudogene	pseudo
common_peak1-16369-52-11-2.52329748954454-10.4721374870381	chr5	122527575	122529684	+	0	NA	Intergenic	MTC|LTR|MaLR	-22360	NM_010861	17906	Mm.1529	NM_010861	ENSMUSG00000013936	Myl2	MLC-2|MLC-2v|Mlc2v|Mylpc	myosin, light polypeptide 2, regulatory, cardiac, slow	protein-coding
unique_peak1-7299-16-1-3.11826364226806-4.46429741251234	chr9	116040533	116041123	+	0	NA	exon (NM_009371, exon 3 of 8)	exon (NM_009371, exon 3 of 8)	43653	NM_029575	21813	Mm.172346	NM_009371	ENSMUSG00000032440	Tgfbr2	1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII	transforming growth factor, beta receptor II	protein-coding
unique_peak1-4344-8-2-1.42025991722641-1.65811743852845	chr2	153936182	153936696	+	0	NA	Intergenic	Lx4B|LINE|L1	-19633	NM_001291079	73388	Mm.71904	NM_028528	ENSMUSG00000027482	Bpifa3	1700058C13Rik|Splunc3	BPI fold containing family A, member 3	protein-coding
unique_peak2-39024-7-19--1.52283726458917-1.55050753388976	chr8	61340171	61341156	+	0	NA	intron (NM_175032, intron 1 of 11)	intron (NM_175032, intron 1 of 11)	49761	NM_175032	270049	Mm.236368	NM_175032		Galntl6	1700021K10Rik|4930431L04Rik|A830023L05	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6	protein-coding
common_peak2-24188-68-91-0.0463988232412831-0.319710768292074	chr16	56028801	56030473	+	0	NA	intron (NM_001024622, intron 1 of 4)	CpG	193	NM_001024622	76302	Mm.310642	NM_001024622	ENSMUSG00000071533	Pcnp	1110018D06Rik|AI647035	PEST proteolytic signal containing nuclear protein	protein-coding
common_peak1-10755-20-10-1.0286431659539-1.30248952876293	chr14	70095412	70096040	+	0	NA	TTS (NM_033325)	TTS (NM_033325)	3671	NR_105915	102465573		NR_105915		Mir6950	mmu-mir-6950	microRNA mir-6950	ncRNA
common_peak2-21492-45-31-0.860358025344872-2.10802515387389	chr11	88613646	88615027	+	0	NA	Intergenic	RSINE1|SINE|B4	34379	NR_038058	193280	Mm.396842	NR_038058		C030037D09Rik	9330160M04	RIKEN cDNA C030037D09 gene	ncRNA
common_peak1-8054-12-8-0.478850983645327-0.562038191119709	chr1	172311651	172312353	+	0	NA	intron (NM_027528, intron 3 of 7)	intron (NM_027528, intron 3 of 7)	73010	NM_001039593	76925	Mm.33631	NM_001039593	ENSMUSG00000042800	1700015E13Rik	-	RIKEN cDNA 1700015E13 gene	protein-coding
unique_peak1-1558-11-2-1.92373108353046-2.32232533660526	chr13	28635625	28636110	+	0	NA	intron (NR_045053, intron 7 of 8)	intron (NR_045053, intron 7 of 8)	166875	NR_105787	102466635		NR_105787	miRBase:MI0021897	Mir6368	mmu-mir-6368	microRNA mir-6368	ncRNA
common_peak2-22136-8-6-0.197867495889966-1.03789460276074	chr12	85485435	85485901	+	0	NA	Intergenic	Intergenic	3771	NM_027438	70481	Mm.444348	NM_027438	ENSMUSG00000054383	Pnma1	5730402C15Rik	paraneoplastic antigen MA1	protein-coding
unique_peak1-2801-11-4-1.18676548936425-1.68134727924692	chr17	15536213	15536980	+	0	NA	intron (NR_033586, intron 1 of 10)	intron (NR_033586, intron 1 of 10)	3386	NM_024203	67544	Mm.35039	NM_024203	ENSMUSG00000014763	Fam120b	4932442K08Rik|AW049283|AW413338|CCPG|Pgcc1|mKIAA1838	family with sequence similarity 120, member B	protein-coding
common_peak1-14042-24-18-0.545282389324131-0.776879508296351	chr2	118745547	118746765	+	0	NA	intron (NM_001045523, intron 4 of 6)	intron (NM_001045523, intron 4 of 6)	-6077	NM_028117	72136	Mm.486238	NM_028117	ENSMUSG00000074916	Chst14	2600016L03Rik|D4ST-1|D4st1	carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	protein-coding
unique_peak2-36905-1-8--2.79698201165906-2.05605744720049	chr3	96634686	96635286	+	0	NA	non-coding (NR_015596, exon 2 of 2)	non-coding (NR_015596, exon 2 of 2)	998	NM_021517	59020	Mm.489677	NM_021517	ENSMUSG00000038298	Pdzk1	1700023D20Rik|2610507N21Rik|4921513F16Rik|AI267131|AI314638|AL022680|D3Ertd537e|Pdzd1|mPDZK1	PDZ domain containing 1	protein-coding
common_peak2-21574-8-6-0.197867495889966-1.03789460276074	chr11	97686786	97687172	+	0	NA	intron (NM_010688, intron 4 of 6)	intron (NM_010688, intron 4 of 6)	-15115	NM_001080935	68127	Mm.110270	NM_001080935	ENSMUSG00000089676	B230217C12Rik	AI840637	RIKEN cDNA B230217C12 gene	protein-coding
unique_peak1-6285-11-1-2.50869358425161-2.83420869758413	chr7	28842154	28842771	+	0	NA	Intergenic	MTEa-int|LTR|MaLR	-7351	NM_011874	23996	Mm.29582	NM_011874	ENSMUSG00000030603	Psmc4	CIP21|MIP224	proteasome (prosome, macropain) 26S subunit, ATPase, 4	protein-coding
common_peak2-27607-19-65--1.64170679269677-5.42871618701747	chr3	103914323	103915522	+	0	NA	intron (NM_001159354, intron 1 of 20)	intron (NM_001159354, intron 1 of 20)	109407	NM_133853	99470	Mm.264849	NM_133853	ENSMUSG00000052539	Magi3	4732496O19Rik|6530407C02Rik|AA407180|AI120132|mKIAA1634	membrane associated guanylate kinase, WW and PDZ domain containing 3	protein-coding
common_peak2-25940-14-7-0.899216160357645-0.947446088118041	chr19	46985623	46985990	+	0	NA	intron (NR_028353, intron 3 of 18)	Lx5|LINE|L1	51035	NM_029810	76952	Mm.40965	NM_029810	ENSMUSG00000025041	Nt5c2	2010002I23Rik|CnII|ENSMUSG00000025039|Gm9751|Gmp|Nt5b|Pnt5|cN-II	5'-nucleotidase, cytosolic II	protein-coding
common_peak1-19338-8-10--0.454209200689727-1.078512453669	chrX	6414780	6415301	+	0	NA	intron (NM_177914, intron 1 of 27)	intron (NM_177914, intron 1 of 27)	58608	NM_177914	331374	Mm.392752	NM_177914	ENSMUSG00000062393	Dgkk	Gm360	diacylglycerol kinase kappa	protein-coding
common_peak2-23621-49-73--0.203169542603766-0.429508824963706	chr15	82898547	82900273	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-31225	NM_023475	68607	Mm.30056	NM_023475	ENSMUSG00000058586	Serhl	0610008B10Rik|1110019M09Rik|AU019786	serine hydrolase-like	protein-coding
common_peak2-25081-18-14-0.406028555619833-0.532159081577619	chr18	35729939	35730712	+	0	NA	intron (NM_010771, intron 1 of 14)	intron (NM_010771, intron 1 of 14)	8513	NM_010771	17184	Mm.215034	NM_010771	ENSMUSG00000037236	Matr3	1110061A14Rik|2810017I02Rik|AI841759|AW555618|D030046F20Rik|mKIAA0723	matrin 3	protein-coding
common_peak2-19659-21-9-1.24756117037887-1.83731222263754	chr1	52726773	52727417	+	0	NA	intron (NM_133829, intron 3 of 6)	intron (NM_133829, intron 3 of 6)	39546	NM_001142647	227094	Mm.83541	NM_172654	ENSMUSG00000043015	Tmem194b	5330401P04Rik|9830163O08	transmembrane protein 194B	protein-coding
common_peak2-23148-9-9--0.132314688483142-1.03275496310833	chr14	105922844	105923277	+	0	NA	Intergenic	Intergenic	25055	NR_045921	74864	Mm.159344	NR_045921	ENSMUSG00000022116	4930449E01Rik	-	RIKEN cDNA 4930449E01 gene	ncRNA
common_peak1-9689-112-177--0.0424831306461151-0.310956942782269	chr12	16893800	16895957	+	0	NA	Intergenic	Intergenic	-6906	NM_009072	19878	Mm.276024	NM_009072	ENSMUSG00000020580	Rock2	B230113H15Rik|ROKalpha|Rho-kinase|Rock-II|Rock2m|mKIAA0619	Rho-associated coiled-coil containing protein kinase 2	protein-coding
common_peak2-22298-39-83--0.776556175859607-2.22432009274867	chr13	17695002	17696249	+	0	NA	intron (NM_138654, intron 6 of 13)	RMER19A|LTR|ERVK	90974	NM_138654	192136	Mm.364180	NM_138654		Sugct	5033411D12Rik|D17907	succinyl-CoA glutarate-CoA transferase	protein-coding
common_peak2-27414-10-10--0.103016273628528-0.301029995663987	chr3	88513916	88514464	+	0	NA	intron (NM_028814, intron 12 of 13)	B3|SINE|B2	-6586	NM_009069	19769	Mm.4009	NM_009069		Rit1	RIBB|ROC1|Rit	Ras-like without CAAX 1	protein-coding
common_peak2-23086-12-9-0.326847890200276-0.459837087125828	chr14	76415226	76415719	+	0	NA	Intergenic	Intergenic	-4800	NM_026816	68705	Mm.20415	NM_026816	ENSMUSG00000067995	Gtf2f2	1110031C13Rik|AI326315	general transcription factor IIF, polypeptide 2	protein-coding
common_peak2-22861-92-100-0.43414060095097-1.49816780976792	chr14	26638056	26639123	+	0	NA	Intergenic	Intergenic	-23052	NM_013469	11744	Mm.294083	NM_013469	ENSMUSG00000021866	Anxa11	A830099O17Rik|Anx11	annexin A11	protein-coding
unique_peak1-3086-6-4-0.24347001549294-0.989110657569874	chr18	24152532	24153026	+	0	NA	intron (NM_011755, intron 2 of 2)	PB1D7|SINE|Alu	4644	NM_011755	22694	Mm.290596	NM_011755	ENSMUSG00000063281	Zfp35	Zfp-35|Znf271|mszf13|mszf20-1|mszf28|mszf68	zinc finger protein 35	protein-coding
unique_peak1-6173-9-2-1.60465090568306-1.87199725847353	chr6	145616588	145617174	+	0	NA	Intergenic	Intergenic	52398	NM_009449	22147	Mm.270295	NM_009449	ENSMUSG00000067338	Tuba3b	M[a]7|Tuba7	tubulin, alpha 3B	protein-coding
common_peak2-22429-12-17--0.521149016354673-0.417187467413082	chr13	37857354	37858000	+	0	NA	Intergenic	MTEa|LTR|MaLR	-60230	NM_026830	68750	Mm.491109	NM_026830	ENSMUSG00000039087	Rreb1	1110037N09Rik|AA414966|B930013M22Rik	ras responsive element binding protein 1	protein-coding
common_peak1-16269-27-28-0.133564955767664-0.358978896303361	chr5	108065437	108066293	+	0	NA	intron (NM_144911, intron 11 of 12)	intron (NM_144911, intron 11 of 12)	-2996	NR_046195	78443	Mm.490703	NR_046195	ENSMUSG00000085900	A930041C12Rik	-	RIKEN cDNA A930041C12 gene	ncRNA
unique_peak2-39788-5-7--0.704380336005853-1.01466476204226	chrX	12080240	12080635	+	0	NA	Intergenic	RMER1A|Other|Other	-84448	NM_027439	70495	Mm.25148	NM_027439	ENSMUSG00000031007	Atp6ap2	(P)RR|5730403E06Rik|APT6M8-9|ATP6M8-9|Atp6ip2|M8-9	ATPase, H+ transporting, lysosomal accessory protein 2	protein-coding
unique_peak1-5627-8-0-3.00522241794757-2.70926996097583	chr6	13149344	13149791	+	0	NA	intron (NM_001013757, intron 6 of 11)	L1Md_F2|LINE|L1	25398	NM_001013757	232585	Mm.389082	NM_001013757	ENSMUSG00000079679	Vwde	Gm467	von Willebrand factor D and EGF domains	protein-coding
unique_peak2-34831-4-9--1.34538860874061-1.36011389749466	chr15	75051163	75051603	+	0	NA	Intergenic	Intergenic	-47468	NM_008530	17071	Mm.377095	NM_008530	ENSMUSG00000022583	Ly6f	-	lymphocyte antigen 6 complex, locus F	protein-coding
unique_peak2-33476-6-8--0.60452689106201-1.03789460276074	chr11	69579838	69580295	+	0	NA	intron (NM_029348, intron 1 of 3)	CpG	652	NM_029348	75580	Mm.426361	NM_029348	ENSMUSG00000018750	Zbtb4	2310026P19Rik|9230111I22Rik|mKIAA1538	zinc finger and BTB domain containing 4	protein-coding
common_peak2-21187-27-48--0.623163893219973-1.00060938969219	chr11	60219945	60220648	+	0	NA	intron (NM_145427, intron 4 of 7)	intron (NM_145427, intron 4 of 7)	10305	NM_145427	246782	Mm.41651	NM_145427	ENSMUSG00000042709	Atpaf2	ATP12|ATP12p	ATP synthase mitochondrial F1 complex assembly factor 2	protein-coding
common_peak1-14147-23-14-0.814876908900562-1.09492971584134	chr2	132093865	132095212	+	0	NA	intron (NM_138651, intron 1 of 12)	intron (NM_138651, intron 1 of 12)	5654	NM_138651	110911	Mm.284503	NM_138651	ENSMUSG00000058793	Cds2	5730450N06Rik|5730460C18Rik|AI854580|D2Wsu127e	CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2	protein-coding
common_peak2-21184-22-12-0.946844386946312-1.31435121412491	chr11	60114519	60115301	+	0	NA	intron (NM_153080, intron 1 of 14)	intron (NM_153080, intron 1 of 14)	51497	NM_153080	216810	Mm.218875	NM_153080	ENSMUSG00000000538	Tom1l2	2900016I08Rik|A730055F12Rik|AU042072|Srebf1	target of myb1-like 2 (chicken)	protein-coding
unique_peak2-39904-6-13--1.2419568116773-1.58711810488664	chrX	95956218	95957048	+	0	NA	intron (NM_052976, intron 5 of 24)	(TG)n|Simple_repeat|Simple_repeat	129691	NM_052976	94190	Mm.254336	NM_052976		Ophn1	C130037N19Rik	oligophrenin 1	protein-coding
unique_peak2-34366-3-17--2.58390809140159-2.65002542325363	chr13	107838295	107838804	+	0	NA	Intergenic	B2_Mm1a|SINE|B2	25899	NR_015471	100040322	Mm.133867	NR_015471		3830408C21Rik	-	RIKEN cDNA 3830408C21 gene	ncRNA
common_peak2-26232-27-30-0.0373496405083609-0.315041925765932	chr2	27916296	27917521	+	0	NA	Intergenic	B3A|SINE|B2	23490	NM_010190	14134	Mm.182935	NM_010190	ENSMUSG00000026835	Fcnb	Fcn2	ficolin B	protein-coding
unique_peak2-32561-4-5--0.608423014574403-0.909929411522249	chr1	77504587	77504988	+	0	NA	intron (NM_007936, intron 2 of 17)	intron (NM_007936, intron 2 of 17)	6876	NM_007936	13838	Mm.400747	NM_007936	ENSMUSG00000026235	Epha4	2900005C20Rik|AI385584|Cek8|Hek8|Sek|Sek1|Tyro1|rb	Eph receptor A4	protein-coding
unique_peak2-33412-6-5--0.0195643903408542-0.947717972411649	chr11	58903840	58904225	+	0	NA	exon (NM_199152, exon 18 of 90)	exon (NM_199152, exon 18 of 90)	45845	NM_001171512	380698	Mm.339542	NM_199152	ENSMUSG00000061462	Obscn	BC046431|Gm878|OTTMUSG00000005786|UNC89	obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF	protein-coding
unique_peak2-36786-3-8--1.58390809140159-1.39487600375387	chr3	79532260	79532911	+	0	NA	intron (NM_212452, intron 1 of 17)	RMER13B|LTR|ERVK	9131	NM_212452	381489	Mm.331086	NM_212452		Rxfp1	Gm1018|Lgr7	relaxin/insulin-like family peptide receptor 1	protein-coding
common_peak2-29031-17-14-0.311405742596519-0.466170754204149	chr5	114100355	114100914	+	0	NA	promoter-TSS (NM_008153)	promoter-TSS (NM_008153)	-235	NM_008153	14747	Mm.5196	NM_008153	ENSMUSG00000042190	Cmklr1	ChemR23|DEZ|Gpcr27|mcmklr1	chemokine-like receptor 1	protein-coding
unique_peak2-36213-7-6--0.00826409175941478-0.97990265578305	chr2	34370669	34371005	+	0	NA	intron (NM_001290625, intron 5 of 11)	intron (NM_001290625, intron 5 of 11)	108466	NM_001290626	227743	Mm.270866	NM_177345	ENSMUSG00000038696	Mapkap1	AI591529|D230039K05Rik|Sin1	mitogen-activated protein kinase associated protein 1	protein-coding
common_peak2-25532-13-20--0.613845392140992-0.532159081577619	chr19	5817515	5818011	+	0	NA	Intergenic	Intergenic	-15092	NR_002847	72289	Mm.298256	NR_002847	ENSMUSG00000092341	Malat1	2210401K01Rik|9430072K23Rik|AI647968|Neat2	metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)	ncRNA
unique_peak1-5032-10-1-2.35641534500877-2.57096726280955	chr4	132416212	132416833	+	0	NA	exon (NM_133887, exon 6 of 9)	exon (NM_133887, exon 6 of 9)	-17438	NM_146154	100336	Mm.105230	NM_146154	ENSMUSG00000028882	Ppp1r8	6330548N22Rik|AU044684|NIPP1	protein phosphatase 1, regulatory (inhibitor) subunit 8	protein-coding
unique_peak1-1237-8-3-1.00522241794757-1.39487600375387	chr11	113209366	113209892	+	0	NA	intron (NM_027216, intron 6 of 9)	B3A|SINE|B2	-138646	NR_040276	319871	Mm.383743	NR_040276	ENSMUSG00000085421	4732490B19Rik	-	RIKEN cDNA 4732490B19 gene	ncRNA
common_peak2-26287-54-71-0.00316076018742173-0.302548520215158	chr2	30900932	30903207	+	0	NA	intron (NM_001177648, intron 10 of 16)	intron (NM_001177648, intron 10 of 16)	49951	NM_001177650	14269	Mm.52297	NM_019406	ENSMUSG00000075415	Fnbp1	1110057E06Rik|2210010H06Rik|FBP1|Fbp17	formin binding protein 1	protein-coding
unique_peak2-35801-2-7--1.91745425626332-1.45399745587252	chr18	60722031	60722352	+	0	NA	intron (NM_025776, intron 2 of 10)	intron (NM_025776, intron 2 of 10)	1751	NM_025776	66810	Mm.275106	NM_025776	ENSMUSG00000024604	Rbm22	8430430L24Rik	RNA binding motif protein 22	protein-coding
common_peak2-28243-54-63-0.173085761629734-0.4314150221026	chr4	123664121	123665884	+	0	NA	Intergenic	B4|SINE|B4	70326	NM_017475	54170	Mm.220922	NM_017475	ENSMUSG00000028646	Rragc	AU041672|Gtr2|RAGC|TIB929|YGR163W	Ras-related GTP binding C	protein-coding
unique_peak1-7259-8-6-0.197867495889966-1.03789460276074	chr9	88858376	88858879	+	0	NA	Intergenic	B3A|SINE|B2	6869	NM_009742	12044	Mm.425593	NM_009742	ENSMUSG00000093809	Bcl2a1a	A1|BB218357|Bcl2a1|Bfl-1|Hbpa1	B cell leukemia/lymphoma 2 related protein A1a	protein-coding
common_peak1-8196-18-23--0.272043349492805-0.34651636097721	chr10	128548629	128549419	+	0	NA	exon (NM_146267, exon 1 of 1)	exon (NM_146267, exon 1 of 1)	455	NM_146267	257667	Mm.377271	NM_146267	ENSMUSG00000042801	Olfr769	MOR114-14	olfactory receptor 769	protein-coding
common_peak2-23225-40-44-0.167122586421423-0.413133827688651	chr15	5185426	5186528	+	0	NA	intron (NM_008965, intron 2 of 2)	intron (NM_008965, intron 2 of 2)	8210	NM_001136079	19219	Mm.18509	NM_008965	ENSMUSG00000039942	Ptger4	EP4|Ptgerep4	prostaglandin E receptor 4 (subtype EP4)	protein-coding
common_peak2-32308-18-31--0.687080848771648-0.820293215674341	chrX	48453216	48454489	+	0	NA	Intergenic	RLTR12A|LTR|ERVK	-82657	NM_172413	72065	Mm.43152	NM_172413	ENSMUSG00000050029	Rap2c	2010200P20Rik|AI194294|AL022976	RAP2C, member of RAS oncogene family	protein-coding
common_peak2-19592-14-11-0.314253659636488-0.435191258261915	chr1	23187659	23188275	+	0	NA	Intergenic	L1_Mus4|LINE|L1	-78875	NM_025746	66755	Mm.431297	NM_025746	ENSMUSG00000073730	4933415F23Rik	-	RIKEN cDNA 4933415F23 gene	protein-coding
common_peak2-24802-31-58--0.657404378548718-1.31742449843084	chr17	66448377	66450316	+	0	NA	intron (NM_028388, intron 1 of 7)	intron (NM_028388, intron 1 of 7)	1553	NM_001278415	72900	Mm.2206	NM_028388	ENSMUSG00000024099	Ndufv2	2900010C23Rik	NADH dehydrogenase (ubiquinone) flavoprotein 2	protein-coding
unique_peak1-3534-19-8-1.23276232521937-1.61268301619756	chr19	21107931	21108696	+	0	NA	Intergenic	Intergenic	-79621	NM_028953	13409	Mm.219585	NM_028953	ENSMUSG00000024749	Tmc1	4933416G09Rik|Beethoven|Bth|CWEA1|dn	transmembrane channel-like gene family 1	protein-coding
common_peak2-32423-14-8-0.729291158915332-0.771068449301682	chrX	164269393	164269828	+	0	NA	intron (NM_001290427, intron 2 of 17)	MER44B|DNA|MER2_type	23399	NM_001290428	333605	Mm.426168	NM_001033330	ENSMUSG00000049176	Frmpd4	Gm196|PKAP1|Pdzd10|Pdzk10|Preso1|preso	FERM and PDZ domain containing 4	protein-coding
common_peak1-14054-26-16-0.840436250908123-1.24110690293937	chr2	119350402	119351405	+	0	NA	intron (NM_172857, intron 10 of 12)	intron (NM_172857, intron 10 of 12)	22460	NM_172857	241624	Mm.212773	NM_172857	ENSMUSG00000048647	Exd1	4932702D22Rik|Exdl1	exonuclease 3'-5' domain containing 1	protein-coding
unique_peak2-39076-7-7--0.200909169701811-0.97990265578305	chr8	73125068	73125452	+	0	NA	intron (NM_133772, intron 4 of 16)	CpG	6880	NM_023627	71780	Mm.29357	NM_023627	ENSMUSG00000019139	Isyna1	1300017C10Rik|AU018670	myo-inositol 1-phosphate synthase A1	protein-coding
common_peak2-22184-7-4-0.477162735410827-1.09384600808989	chr12	104864581	104864918	+	0	NA	intron (NM_144834, intron 3 of 4)	intron (NM_144834, intron 3 of 4)	4866	NM_144834	217847	Mm.29094	NM_144834	ENSMUSG00000061947	Serpina10	PZI|ZPI	serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10	protein-coding
common_peak2-26616-3-4--0.73591118484664-0.864171920961574	chr2	117461691	117461982	+	0	NA	Intergenic	ID4|SINE|ID	-185828	NR_040631	73938	Mm.399107	NR_040631	ENSMUSG00000086221	4930412B13Rik	-	RIKEN cDNA 4930412B13 gene	ncRNA
common_peak1-15384-29-20-0.71997265783635-1.20071330053879	chr4	63558219	63559236	+	0	NA	Intergenic	Intergenic	-36409	NM_009403	21949	Mm.4664	NM_009403		Tnfsf8	CD153|CD30LG|Cd30l	tumor necrosis factor (ligand) superfamily, member 8	protein-coding
common_peak2-32296-16-34--1.0110193746769-1.55539563639961	chrX	38455784	38456555	+	0	NA	Intergenic	Lx9|LINE|L1	-298309	NM_016886	53623	Mm.327681	NM_016886	ENSMUSG00000001986	Gria3	2900064I19Rik|GluA3|GluR-C|GluR-K3|Glur-3|Glur3|Gluralpha3	glutamate receptor, ionotropic, AMPA3 (alpha 3)	protein-coding
common_peak2-29277-21-30--0.384707045120639-0.446094173747089	chr5	142920593	142921768	+	0	NA	intron (NM_199068, intron 2 of 8)	intron (NM_199068, intron 2 of 8)	-18705	NM_172725	231855	Mm.78250	NM_172725	ENSMUSG00000039623	Ap5z1	C330006K01Rik	adaptor-related protein complex 5, zeta 1 subunit	protein-coding
common_peak2-26693-4-5--0.608423014574403-0.909929411522249	chr2	126932346	126932723	+	0	NA	intron (NM_144818, intron 15 of 17)	intron (NM_144818, intron 15 of 17)	27156	NM_144818	215387	Mm.29786	NM_144818	ENSMUSG00000034906	Ncaph	A730011O11Rik|Brrn1|HCAP-H|mKIAA0074	non-SMC condensin I complex, subunit H	protein-coding
common_peak2-29184-14-21--0.560215458279653-0.519193887192484	chr5	135077784	135078325	+	0	NA	intron (NM_020044, intron 12 of 12)	ID_B1|SINE|B4	12841	NM_022964	56743	Mm.391375	NM_020044	ENSMUSG00000040751	Lat2	AW125574|LAB|NTAL|WSCR5|Wbscr15|Wbscr5	linker for activation of T cells family, member 2	protein-coding
common_peak2-29159-15-22--0.511397205501357-0.50761186003982	chr5	129941977	129942874	+	0	NA	Intergenic	Intergenic	-64681	NM_172276	231769	Mm.288714	NM_172276	ENSMUSG00000029439	Sfswap	1190005N23Rik|6330437E22Rik|AI197402|AW212079|SWAP|Sfrs8|Srsf8	splicing factor, suppressor of white-apricot homolog (Drosophila)	protein-coding
common_peak2-28572-18-21--0.146512467408946-0.306326795069975	chr5	8659923	8660797	+	0	NA	intron (NM_011076, intron 1 of 27)	CpG	268	NM_011076	18671	Mm.207354	NM_011076	ENSMUSG00000040584	Abcb1a	Abcb4|Evi32|Mdr1a|Mdr3|P-gp|Pgp|Pgy-3|Pgy3|mdr-3	ATP-binding cassette, sub-family B (MDR/TAP), member 1A	protein-coding
common_peak2-20495-15-25--0.688274967585436-0.73354163167379	chr10	58322573	58323291	+	0	NA	intron (NM_172788, intron 1 of 9)	Lx8|LINE|L1	46825	NM_172788	237353	Mm.333078	NM_172788	ENSMUSG00000037990	Sh3rf3	4831416G18Rik|Igfbp5-ip|Sh3md4|Sh3rf31	SH3 domain containing ring finger 3	protein-coding
unique_peak2-38144-2-6--1.72480917832092-1.26211192963361	chr6	85443077	85443483	+	0	NA	intron (NM_001001160, intron 1 of 13)	RMER15|LTR|ERVL	9708	NM_001001160	330369	Mm.38777	NM_001001160	ENSMUSG00000047013	Fbxo41	9630017H13|D6Ertd538e	F-box protein 41	protein-coding
common_peak2-31081-11-12--0.191746133889479-0.310474156842889	chr8	24974574	24975164	+	0	NA	intron (NM_001277239, intron 4 of 7)	intron (NM_001277239, intron 4 of 7)	194736	NM_177086	320158	Mm.121274	NM_177086	ENSMUSG00000037492	Zmat4	9630048M01Rik	zinc finger, matrin type 4	protein-coding
common_peak1-10045-20-29--0.418815811017326-0.51032171069054	chr13	17803175	17804178	+	0	NA	Intergenic	Intergenic	16429	NM_025479	66308	Mm.291109	NM_025479	ENSMUSG00000012429	Mplkip	2810021B07Rik|C330007M08Rik|Ttdn1	M-phase specific PLK1 intereacting protein	protein-coding
common_peak2-32406-15-14-0.105274154947137-0.330004445983672	chrX	151096058	151096525	+	0	NA	Intergenic	A-rich|Low_complexity|Low_complexity	-82418	NM_001037167	434881	Mm.357614	NM_001037167	ENSMUSG00000072888	Samt2	EG434881|Gm5647	spermatogenesis associated multipass transmembrane protein 2	protein-coding
common_peak1-7754-11-8-0.338768582809301-1.14218153353838	chr1	91054700	91055198	+	0	NA	Intergenic	Intergenic	35178	NR_106129	102465771		NR_106129		Mir7669	mmu-mir-7669	microRNA mir-7669	ncRNA
common_peak2-19551-35-56--0.401519755702237-0.672788403510108	chr1	182516648	182517835	+	0	NA	promoter-TSS (NR_105869)	promoter-TSS (NR_105869)	-91	NR_105869	102466761		NR_105869		Mir6904	mmu-mir-6904	microRNA mir-6904	ncRNA
unique_peak2-32532-3-9--1.73591118484664-1.57096726280955	chr1	64119389	64119779	+	0	NA	intron (NM_033563, intron 2 of 3)	intron (NM_033563, intron 2 of 3)	-30509	NR_105864	102466760		NR_105864		Mir6899	mmu-mir-6899	microRNA mir-6899	ncRNA
common_peak1-16746-16-9-0.796335547380699-0.844317084070804	chr6	31372773	31373526	+	0	NA	intron (NM_013791, intron 2 of 17)	B4A|SINE|B4	24321	NM_013791	27418	Mm.238038	NM_013791		Mkln1	A130067F06Rik|AU015903|BB154892	muskelin 1, intracellular mediator containing kelch motifs	protein-coding
common_peak2-28116-12-10-0.189344366450341-0.386243247519795	chr4	89052796	89053168	+	0	NA	Intergenic	B1_Mur4|SINE|Alu	-96041	NM_007670	12579	Mm.423094	NM_007670	ENSMUSG00000073802	Cdkn2b	AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b	cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)	protein-coding
common_peak2-25927-29-42--0.313974674086987-0.439405572480898	chr19	46502956	46504389	+	0	NA	intron (NM_001025391, intron 3 of 11)	RMER6A|LTR|ERVK	32286	NM_015752	24069	Mm.41210	NM_015752	ENSMUSG00000025231	Sufu	Su(fu)	suppressor of fused homolog (Drosophila)	protein-coding
common_peak1-16858-56-89--0.256257270890432-0.560863550509137	chr6	54816605	54818085	+	0	NA	intron (NM_199143, intron 2 of 4)	intron (NM_199143, intron 2 of 4)	50435	NM_199143	387524	Mm.286149	NM_199143		Znrf2	1190002C14Rik|AU044205|D6Ertd365e	zinc and ring finger 2	protein-coding
unique_peak1-5606-44-11-2.23693033384738-7.70064994686311	chr6	93273305	93274946	+	0	NA	Intergenic	Intergenic	383549	NR_015530	330385	Mm.483472	NR_015530	ENSMUSG00000097462	9530026P05Rik	B430306B02	RIKEN cDNA 9530026P05 gene	ncRNA
unique_peak2-33945-0-13--4.64748585253181-3.36932189928148	chr12	75702177	75702750	+	0	NA	Intergenic	Intergenic	304002	NM_198866	386753	Mm.341686	NM_198866	ENSMUSG00000029878	Dbpht2	Spot2	DNA binding protein with his-thr domain	protein-coding
common_peak1-13430-63-53-0.683425088907121-2.11210046032967	chr19	55218314	55220162	+	0	NA	Intergenic	Intergenic	-36137	NM_009348	21684	Mm.42139	NM_009348	ENSMUSG00000024979	Tectb	Tctnb	tectorin beta	protein-coding
common_peak2-28569-138-255--0.20432917530361-0.797177463948739	chr5	8055399	8057484	+	0	NA	promoter-TSS (NM_001080974)	promoter-TSS (NM_001080974)	-101	NM_001080974	109552	Mm.96211	NM_025618	ENSMUSG00000003161	Sri	2210417O06Rik|2900070H08Rik|Sor	sorcin	protein-coding
common_peak1-16069-37-33-0.43853023023548-0.767679714496325	chr5	52782325	52783859	+	0	NA	intron (NM_001256059, intron 10 of 11)	intron (NM_001256059, intron 10 of 11)	28049	NM_011435	20657	Mm.2407	NM_011435		Sod3	AI314465|EC-SOD	superoxide dismutase 3, extracellular	protein-coding
common_peak2-20694-9-13--0.617741515653384-0.459837087125828	chr10	91182272	91182808	+	0	NA	Intergenic	Intergenic	352390	NR_029812	723955		NR_029812	miRBase:MI0000715	Mir135a-2	Mirn135a-2	microRNA 135a-2	ncRNA
unique_peak2-39704-2-9--2.23938235115068-1.87199725847353	chr9	114731201	114731594	+	0	NA	intron (NM_027294, intron 1 of 3)	intron (NM_027294, intron 1 of 3)	21873	NM_027294	70031	Mm.150064	NM_027294	ENSMUSG00000041012	Cmtm8	2700018N07Rik|AA408515|Cklfsf8	CKLF-like MARVEL transmembrane domain containing 8	protein-coding
unique_peak2-34261-12-29--1.25811461052088-1.65862513589797	chr13	64128970	64129899	+	0	NA	Intergenic	Intergenic	61075	NM_008291	15487	Mm.5109	NM_008291	ENSMUSG00000033122	Hsd17b3	-	hydroxysteroid (17-beta) dehydrogenase 3	protein-coding
unique_peak2-34001-5-8--0.874305337448166-1.10484139239135	chr12	98734437	98734820	+	0	NA	Intergenic	L1Md_F2|LINE|L1	762919	NM_008079	14420	Mm.5120	NM_008079	ENSMUSG00000021003	Galc	2310068B06Rik|A930008M05Rik|AW212969|AW413532|Gacy|twi|twitcher	galactosylceramidase	protein-coding
common_peak2-25409-64-35-1.29552140026629-5.42624745676224	chr19	38600101	38601273	+	0	NA	intron (NM_019588, intron 1 of 31)	intron (NM_019588, intron 1 of 31)	2000	NM_019588	74055	Mm.34031	NM_019588	ENSMUSG00000024998	Plce1	4933403A21Rik|PLCepsilon|Plce|mKIAA1516	phospholipase C, epsilon 1	protein-coding
common_peak2-22994-19-18-0.154759813218101-0.351190433797598	chr14	57826003	57826725	+	0	NA	Intergenic	ERVL-B4-int|LTR|ERVL	-73916	NM_001010937	14623	Mm.25652	NM_008128	ENSMUSG00000040055	Gjb6	AA958971|Cx30|D14Bwg0506e	gap junction protein, beta 6	protein-coding
unique_peak1-7141-15-8-0.842239749113344-0.891319708951327	chr9	56860395	56861267	+	0	NA	intron (NM_019651, intron 1 of 12)	intron (NM_019651, intron 1 of 12)	18056	NM_019651	56294	Mm.325643	NM_019651	ENSMUSG00000032290	Ptpn9	MEG2	protein tyrosine phosphatase, non-receptor type 9	protein-coding
unique_peak1-5624-7-2-1.21412832957703-1.45399745587252	chr6	7777225	7777705	+	0	NA	Intergenic	Intergenic	-17759	NM_052993	94192	Mm.102752	NM_052993	ENSMUSG00000042460	C1galt1	2210410E06Rik|AV284120|T-synthase	core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1	protein-coding
unique_peak1-1416-9-2-1.60465090568306-1.87199725847353	chr12	80032279	80032869	+	0	NA	Intergenic	Intergenic	-24649	NM_013738	27260	Mm.103380	NM_013738	ENSMUSG00000021118	Plek2	-	pleckstrin 2	protein-coding
unique_peak2-35026-6-7--0.434601889619698-0.97990265578305	chr15	102510480	102510839	+	0	NA	Intergenic	L1ME3A|LINE|L1	-8362	NR_030460	751542		NR_030460	miRBase:MI0004653	Mir688	Mirn688|mmu-mir-688	microRNA 688	ncRNA
common_peak2-24024-14-16--0.188246680892695-0.308035960714963	chr16	22857753	22858378	+	0	NA	promoter-TSS (NM_001081368)	promoter-TSS (NM_001081368)	147	NM_001190804	67838	Mm.37516	NM_026400	ENSMUSG00000004460	Dnajb11	1810031F23Rik|ABBP-2|AL024055|Dj9|ERdj3|ERj3p	DnaJ (Hsp40) homolog, subfamily B, member 11	protein-coding
unique_peak1-4233-6-0-2.5653981103803-2.10720996964787	chr2	124722328	124722783	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-171308	NM_175034	317750	Mm.330538	NM_175034	ENSMUSG00000035183	Slc24a5	F630045L20Rik|JSX|NCKX5|NCX5|Oca6	solute carrier family 24, member 5	protein-coding
unique_peak1-194-10-3-1.35641534500877-1.75805390616669	chr1	78585420	78586108	+	0	NA	Intergenic	ID_B1|SINE|B4	-68636	NM_001033606	74205	Mm.276016	NM_028817	ENSMUSG00000032883	Acsl3	2610510B12Rik|Acs3|C85929|Facl3|Pro2194	acyl-CoA synthetase long-chain family member 3	protein-coding
common_peak1-10993-26-39--0.3940290027289-0.556669751231374	chr15	36607711	36609162	+	0	NA	Intergenic	L1Md_A|LINE|L1	-69708	NM_008774	18458	Mm.371570	NM_008774	ENSMUSG00000022283	Pabpc1	PABP|Pabp1|PabpI|Pabpl1|ePAB	poly(A) binding protein, cytoplasmic 1	protein-coding
common_peak2-25797-19-13-0.595332404604082-0.713635438203849	chr19	37263992	37264660	+	0	NA	intron (NR_045329, intron 2 of 2)	ID_B1|SINE|B4	8272	NM_001290829	208922	Mm.391176	NM_198300	ENSMUSG00000039652	Cpeb3	4831444O18Rik|CPE-BP3|mKIAA0940	cytoplasmic polyadenylation element binding protein 3	protein-coding
common_peak1-18469-80-149--0.378242924126528-1.2545177914138	chr8	84661117	84662761	+	0	NA	Intergenic	Intergenic	264546	NM_001254747	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
unique_peak1-5964-8-0-3.00522241794757-2.70926996097583	chr6	93333625	93334134	+	0	NA	Intergenic	Intergenic	443303	NR_015530	330385	Mm.483472	NR_015530	ENSMUSG00000097462	9530026P05Rik	B430306B02	RIKEN cDNA 9530026P05 gene	ncRNA
unique_peak2-38168-11-19--0.813234510635749-0.769930178837768	chr6	88941224	88942363	+	0	NA	Intergenic	RMER17C|LTR|ERVK	89548	NM_011906	24100	Mm.284480	NM_011906	ENSMUSG00000002871	Tpra1	40kDa|Gpr175|Tpra40	transmembrane protein, adipocyte asscociated 1	protein-coding
common_peak2-30361-13-19--0.543456064249594-0.466170754204149	chr7	28350713	28351407	+	0	NA	intron (NM_175107, intron 6 of 9)	B2_Mm1a|SINE|B2	5565	NM_001122767	66367	Mm.29831	NM_175107	ENSMUSG00000049643	2310022A10Rik	-	RIKEN cDNA 2310022A10 gene	protein-coding
unique_peak2-38330-5-14--1.61127093161437-1.95509489018123	chr6	148637752	148638514	+	0	NA	Intergenic	ORR1E|LTR|MaLR	-75302	NR_045867	622319	Mm.491049	NM_001037912	ENSMUSG00000070995	Gm6313	EG622319	predicted gene 6313	ncRNA
unique_peak1-728-8-0-3.00522241794757-2.70926996097583	chr10	96015395	96015973	+	0	NA	Intergenic	B4A|SINE|B4	-63951	NM_007569	12226	Mm.23811	NM_007569	ENSMUSG00000036478	Btg1	AI426953|AW546738	B cell translocation gene 1, anti-proliferative	protein-coding
common_peak1-18763-18-15-0.312919151228352-0.456667090758524	chr8	126805597	126806375	+	0	NA	intron (NM_139272, intron 1 of 15)	intron (NM_139272, intron 1 of 15)	50692	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
unique_peak1-2998-12-3-1.64877598508764-2.36932189928148	chr17	83956078	83956741	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	-42736	NM_001159529	20463	Mm.30072	NM_009187	ENSMUSG00000024248	Cox7a2l	COX7AR|COX7RP|EB1|SIG-81|SIG81|Silg81	cytochrome c oxidase subunit VIIa polypeptide 2-like	protein-coding
unique_peak2-35630-3-6--1.22133801201688-1.08602067057793	chr17	87550036	87550473	+	0	NA	Intergenic	Intergenic	43235	NM_019654	56468	Mm.126885	NM_019654	ENSMUSG00000037104	Socs5	1810018L08Rik|Cish5|mKIAA0671	suppressor of cytokine signaling 5	protein-coding
unique_peak1-5368-14-13-0.0918612383000403-0.332077462497413	chr5	96209389	96210003	+	0	NA	intron (NM_001122668, intron 1 of 3).2	Lx5|LINE|L1	4807	NM_001122668	665943	Mm.348795	NM_001122668	ENSMUSG00000072813	E330014E10Rik	-	RIKEN cDNA E330014E10 gene	protein-coding
unique_peak2-34878-8-20--1.38709500483119-1.45476480588849	chr15	78983045	78983613	+	0	NA	Intergenic	Intergenic	11532	NM_027231	69833	Mm.279861	NM_027231	ENSMUSG00000033020	Polr2f	1810060D16Rik	polymerase (RNA) II (DNA directed) polypeptide F	protein-coding
unique_peak2-34846-1-10--3.08648862885404-2.57096726280955	chr15	76069435	76069819	+	0	NA	intron (NM_001163575, intron 9 of 10)	intron (NM_001163575, intron 9 of 10)	4243	NM_001163576	671535	Mm.373750	NM_001163575	ENSMUSG00000063268	Parp10	-	poly (ADP-ribose) polymerase family, member 10	protein-coding
unique_peak2-35829-5-6--0.511735258063458-0.947717972411649	chr18	65503815	65504249	+	0	NA	intron (NM_001037294, intron 4 of 12)	L1Md_T|LINE|L1	49510	NM_001037294	225638	Mm.296528	NM_001037294	ENSMUSG00000032845	Alpk2	Gm549|Hak	alpha-kinase 2	protein-coding
unique_peak2-39227-8-16--1.08224042330277-0.891319708951328	chr8	111056410	111057169	+	0	NA	Intergenic	Intergenic	51788	NR_077224	109215	Mm.65282	NR_077224		3010033K07Rik	-	RIKEN cDNA 3010033K07 gene	ncRNA
unique_peak1-233-8-2-1.42025991722641-1.65811743852845	chr1	89474019	89474459	+	0	NA	intron (NM_001160164, intron 1 of 2)	L1Md_F2|LINE|L1	3637	NM_001160163	23956	Mm.143717	NM_015750	ENSMUSG00000079434	Neu2	MBS|MSS|MTS	neuraminidase 2	protein-coding
common_peak1-17832-9-12--0.510826311736872-0.394412252720706	chr7	109703710	109704295	+	0	NA	TTS (NM_147101)	TTS (NM_147101)	1202	NM_147101	259105	Mm.424092	NM_147101	ENSMUSG00000073977	Olfr549	MOR31-3	olfactory receptor 549	protein-coding
unique_peak1-6794-10-3-1.35641534500877-1.75805390616669	chr8	69922527	69923038	+	0	NA	Intergenic	MTEb|LTR|MaLR	-91875	NM_008673	17960	Mm.14125	NM_008673	ENSMUSG00000025588	Nat1	Nat-1	N-acetyl transferase 1	protein-coding
unique_peak1-4541-9-6-0.382258484346616-1.11707584880836	chr3	37754033	37754594	+	0	NA	Intergenic	L1_Mur2|LINE|L1	-43422	NR_040559	626410	Mm.389417	NR_040559		Gm20755	-	predicted gene, 20755	ncRNA
common_peak2-19868-23-19-0.399839409621718-0.538442145997695	chr1	93160226	93161086	+	0	NA	intron (NM_026454, intron 3 of 9)	intron (NM_026454, intron 3 of 9)	13760	NM_026454	67921	Mm.337238	NM_026454	ENSMUSG00000034343	Ube2f	2510010F15Rik|AI851109	ubiquitin-conjugating enzyme E2F (putative)	protein-coding
common_peak2-32238-8-11--0.579740082773585-1.14218153353838	chr9	124422450	124423044	+	0	NA	Intergenic	Intergenic	386465	NM_009917	12774	Mm.14302	NM_009917	ENSMUSG00000079227	Ccr5	AM4-7|CD195|Cmkbr5	chemokine (C-C motif) receptor 5	protein-coding
common_peak2-28827-18-11-0.727956650507195-0.876666802405043	chr5	66082222	66082706	+	0	NA	intron (NM_001081321, intron 2 of 31)	intron (NM_001081321, intron 2 of 31)	6631	NM_001081321	71521	Mm.278974	NM_027818	ENSMUSG00000029202	Pds5a	9030416H16Rik|E230024D05Rik|mKIAA0648	PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	protein-coding
common_peak2-22466-41-42-0.274883950146562-0.532475415427916	chr13	46669239	46670476	+	0	NA	intron (NM_026056, intron 4 of 12)	(CA)n|Simple_repeat|Simple_repeat	72585	NM_026056	67252	Mm.44529	NM_026056	ENSMUSG00000021373	Cap2	2810452G09Rik|AV045235	CAP, adenylate cyclase-associated protein, 2 (yeast)	protein-coding
unique_peak1-2060-7-1-1.79909083029819-1.80617997398389	chr15	27783569	27784096	+	0	NA	intron (NM_001081302, intron 13 of 56)	intron (NM_001081302, intron 13 of 56)	171771	NM_001081302	223435	Mm.485422	NM_001081302	ENSMUSG00000022263	Trio	6720464I07Rik|AA408740|Solo	triple functional domain (PTPRF interacting)	protein-coding
common_peak1-8091-17-31--0.781703661794962-0.932560489028298	chr1	180812808	180813546	+	0	NA	intron (NM_001161665, intron 9 of 14)	L1MEc|LINE|L1	353921	NM_001161665	269152	Mm.129727	NM_177724	ENSMUSG00000026494	Kif26b	4832420M10|BC056349|D230039L06Rik	kinesin family member 26B	protein-coding
common_peak1-9899-10-8-0.186490343566457-1.078512453669	chr12	86142098	86142664	+	0	NA	intron (NM_013589, intron 16 of 34)	intron (NM_013589, intron 16 of 34)	28161	NM_028863	74316	Mm.25719	NM_028863	ENSMUSG00000021241	Isca2	0710001C05Rik|5730594E03Rik|Hbld1	iron-sulfur cluster assembly 2 homolog (S. cerevisiae)	protein-coding
common_peak1-11703-16-12-0.417823924126969-0.489164546851866	chr16	31602660	31603296	+	0	NA	Intergenic	Intergenic	-60551	NM_001252435	13383	Mm.382	NM_007862	ENSMUSG00000022770	Dlg1	B130052P05Rik|Dlgh1|E-dlg/SAP97|SAP-97|SAP97|mKIAA4187	discs, large homolog 1 (Drosophila)	protein-coding
unique_peak2-37552-6-11--1.01956439034085-1.32595962126035	chr5	31627731	31628287	+	0	NA	intron (NM_144909, intron 17 of 18)	B1_Mur4|SINE|Alu	28055	NM_144909	231103	Mm.100043	NM_144909	ENSMUSG00000059434	Gckr	GKRP	glucokinase regulatory protein	protein-coding
common_peak2-20444-28-44--0.438893976508212-0.643431604871956	chr10	37135951	37137153	+	0	NA	Intergenic	Intergenic	-277820	NM_008538	17118	Mm.30059	NM_008538	ENSMUSG00000069662	Marcks	Macs|PKCSL	myristoylated alanine rich protein kinase C substrate	protein-coding
unique_peak2-33537-2-7--1.91745425626332-1.45399745587252	chr11	78032222	78032542	+	0	NA	intron (NM_009297, intron 26 of 36)	intron (NM_009297, intron 26 of 36)	25488	NM_001045516	216974	Mm.50974	NM_001045516	ENSMUSG00000044122	Proca1	4933404M19Rik	protein interacting with cyclin A1	protein-coding
common_peak2-31289-26-33--0.159563749091877-0.332062764479297	chr8	72492221	72492765	+	0	NA	intron (NM_145596, intron 1 of 12)	MT2B|LTR|ERVL	5789	NM_001113346	234366	Mm.270044	NM_145596	ENSMUSG00000036180	Gatad2a	1110066C11Rik|BC031407|C80248	GATA zinc finger domain containing 2A	protein-coding
common_peak2-21262-34-46--0.172520324676372-0.340524918943711	chr11	69632884	69633708	+	0	NA	Intergenic	B3A|SINE|B2	-1354	NM_175368	108803	Mm.73263	NM_175368	ENSMUSG00000044084	4933402P03Rik	-	RIKEN cDNA 4933402P03 gene	protein-coding
unique_peak2-32911-3-6--1.22133801201688-1.08602067057793	chr10	22148360	22148708	+	0	NA	Intergenic	MuLV-int|LTR|ERV1	25915	NR_028580	100038752	Mm.392859	NR_028580	ENSMUSG00000096937	Gm10825	ENSMUSG00000075295	predicted gene 10825	ncRNA
common_peak2-28773-27-32--0.0528481684632176-0.301029995663997	chr5	52782708	52783609	+	0	NA	intron (NM_001256059, intron 10 of 11)	intron (NM_001256059, intron 10 of 11)	28115	NM_011435	20657	Mm.2407	NM_011435		Sod3	AI314465|EC-SOD	superoxide dismutase 3, extracellular	protein-coding
common_peak2-23464-16-20--0.274053780510699-0.353907621462756	chr15	72809413	72810026	+	0	NA	intron (NM_001164642, intron 8 of 16)	B4|SINE|B4	76523	NM_029640	76510	Mm.158902	NM_029640	ENSMUSG00000047921	Trappc9	1810044A24Rik|2900005P22Rik|4632408O18Rik|Ibp|Nibp|TRS130|mKIAA1882	trafficking protein particle complex 9	protein-coding
common_peak1-11221-10-8-0.186490343566457-1.078512453669	chr15	79299068	79299649	+	0	NA	Intergenic	ORR1A0|LTR|MaLR	-26871	NM_013767	27373	Mm.30199	NM_013767	ENSMUSG00000022433	Csnk1e	AI426939|AI551861|AW457082|CK1epsilon|CKIe|KC1epsilon|tau	casein kinase 1, epsilon	protein-coding
unique_peak1-2977-8-4-0.683294323060208-1.21878474469819	chr17	75306442	75306938	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-98179	NM_019919	268977	Mm.269747	NM_019919	ENSMUSG00000001870	Ltbp1	9430031G15Rik|9830146M04|Ltbp-1|Tgfb|b2b1000Clo	latent transforming growth factor beta binding protein 1	protein-coding
unique_peak2-37686-3-11--1.99894559068043-1.95434855131066	chr5	99010187	99010730	+	0	NA	intron (NM_001024614, intron 3 of 5)	intron (NM_001024614, intron 3 of 5)	-105775	NR_030484	735265		NR_030484		Mir703	Mirn703|mmu-mir-703	microRNA 703	ncRNA
common_peak2-23748-12-5-1.06381348436648-1.78669045979184	chr15	97814897	97815202	+	0	NA	intron (NM_001113515, intron 32 of 52)	intron (NM_001113515, intron 32 of 52)	20106	NM_031163	12824	Mm.2423	NM_031163	ENSMUSG00000022483	Col2a1	Col2|Col2a|Col2a-1|Del1|Dmm|Lpk|M100856|Rgsc856	collagen, type II, alpha 1	protein-coding
common_peak1-18087-24-38--0.492192316094532-0.631311512744354	chr8	92356468	92357497	+	0	NA	Intergenic	Intergenic	515169	NM_172913	244579	Mm.302755	NM_172913	ENSMUSG00000043668	Tox3	500-9|BC052044|C230068E13|CAGF9|Tnrc9	TOX high mobility group box family member 3	protein-coding
common_peak1-15163-38-25-0.871012941157439-1.90173050117047	chr3	146875027	146876276	+	0	NA	Intergenic	MTD|LTR|MaLR	360320	NM_027594	70892	Mm.187793	NM_027594	ENSMUSG00000036745	Ttll7	1110049N09Rik|4921517B04Rik|C630030B20|Ttll7s	tubulin tyrosine ligase-like family, member 7	protein-coding
unique_peak1-3688-16-3-2.11826364226806-2.65002542325363	chr19	42740284	42741057	+	0	NA	Intergenic	ORR1A3-int|LTR|MaLR	-53374	NM_053083	67573	Mm.178767	NM_053083	ENSMUSG00000025185	Loxl4	4833426I20Rik|Loxc	lysyl oxidase-like 4	protein-coding
common_peak1-11295-28-17-0.88303411837915-1.43262124146305	chr15	83446700	83447895	+	0	NA	intron (NM_022723, intron 14 of 21)	intron (NM_022723, intron 14 of 21)	-21710	NM_183017	223723	Mm.46778	NM_183017	ENSMUSG00000016757	Ttll12	BC055368|D430005B17	tubulin tyrosine ligase-like family, member 12	protein-coding
common_peak1-13398-12-17--0.521149016354673-0.417187467413082	chr19	47315910	47316498	+	0	NA	intron (NM_021360, intron 3 of 5)	intron (NM_021360, intron 3 of 5)	12871	NM_001163480	18011	Mm.313651	NM_021360	ENSMUSG00000006435	Neurl1a	2410129E16Rik|AI450910|AI481072|Neu1|Neur1|Neurl|Neurl1|Nlz|Rnf67	neuralized homolog 1A (Drosophila)	protein-coding
unique_peak2-36658-5-6--0.511735258063458-0.947717972411649	chr3	21049419	21049679	+	0	NA	Intergenic	Intergenic	-783450	NM_175086	11608	Mm.134863	NM_175086	ENSMUSG00000054988	Agtr1b	AT1B|AT2R1B|Agtr-1b|Angtr-1b	angiotensin II receptor, type 1b	protein-coding
common_peak2-23542-39-51--0.0846784712219382-0.309716464454027	chr15	78406174	78407006	+	0	NA	Intergenic	Intergenic	-3377	NM_009008	19354	Mm.1972	NM_009008	ENSMUSG00000033220	Rac2	AI323801|AI452260	RAS-related C3 botulinum substrate 2	protein-coding
unique_peak2-34094-4-5--0.608423014574403-0.909929411522249	chr13	12680300	12680635	+	0	NA	intron (NM_026184, intron 6 of 15)	intron (NM_026184, intron 6 of 15)	22317	NM_026184	67475	Mm.358706	NM_026184	ENSMUSG00000057069	Ero1lb	1300013B24Rik|1700065B09Rik|AI447560|ero1-beta	ERO1-like beta (S. cerevisiae)	protein-coding
unique_peak1-5651-95-30-2.19371903463714-17.5058789257543	chr6	29847319	29850681	+	0	NA	intron (NM_021414, intron 12 of 16)	intron (NM_021414, intron 12 of 16)	-18013	NM_001037740	320609	Mm.56097	NM_177204	ENSMUSG00000039629	Strip2	D330017J20Rik|Fam40b	striatin interacting protein 2	protein-coding
common_peak2-24373-57-105--0.46188741448427-1.24015883384958	chr17	8282498	8284562	+	0	NA	intron (NM_001033442, intron 2 of 3).2	intron (NM_001033442, intron 2 of 3).2	10563	NM_001033442	381059	Mm.490353	NM_001033442		Gm1604b	ENSMUSG00000073470|Gm1604	predicted gene 1604b	protein-coding
common_peak1-10090-11-22--1.0148683718054-1.11267835143409	chr13	23760615	23761201	+	0	NA	Intergenic	RMER5|LTR|ERV1	14920	NM_178189	319164	Mm.261973	NM_178189	ENSMUSG00000069270	Hist1h2ac	-	histone cluster 1, H2ac	protein-coding
unique_peak2-35706-1-7--2.62705701021674-1.80617997398389	chr18	32051502	32052024	+	0	NA	intron (NM_028866, intron 16 of 21)	ID_B1|SINE|B4	19794	NM_026006	67158	Mm.31537	NM_026006	ENSMUSG00000044982	Sft2d3	2610206C24Rik|AI847965|AW046173	SFT2 domain containing 3	protein-coding
common_peak2-31761-2-8--2.08737925770563-1.65811743852845	chr9	21237870	21238275	+	0	NA	intron (NM_001253893, intron 1 of 20)	intron (NM_001253893, intron 1 of 20)	8720	NM_001039520	13430	Mm.433257	NM_007871	ENSMUSG00000033335	Dnm2	Dyn2|Udnm|b2b2159Clo	dynamin 2	protein-coding
common_peak1-14019-33-34-0.202054545580562-0.406785247261493	chr2	112367317	112368628	+	0	NA	intron (NM_028844, intron 2 of 5)	ORR1A4|LTR|MaLR	-31867	NM_001165935	74268	Mm.315125	NM_028844		Aven	1700013A01Rik|1700056A21Rik|mAven-L|mAven-S	apoptosis, caspase activation inhibitor	protein-coding
common_peak2-32095-17-12-0.517856620063946-0.647240723060192	chr9	99131221	99132090	+	0	NA	intron (NM_001244762, intron 4 of 4)	intron (NM_001244762, intron 4 of 4)	6003	NM_001244762	623459	Mm.260891	NM_001244762	ENSMUSG00000096316	Gm6432	EG623459	predicted gene 6432	protein-coding
common_peak1-12649-25-17-0.691924903902794-0.98872314135509	chr18	35729551	35730696	+	0	NA	intron (NM_010771, intron 1 of 14)	intron (NM_010771, intron 1 of 14)	8311	NM_010771	17184	Mm.215034	NM_010771	ENSMUSG00000037236	Matr3	1110061A14Rik|2810017I02Rik|AI841759|AW555618|D030046F20Rik|mKIAA0723	matrin 3	protein-coding
common_peak1-14701-31-23-0.640276170091967-1.01695873136768	chr3	69046430	69047405	+	0	NA	Intergenic	B3A|SINE|B2	20576	NM_027843	71619	Mm.98122	NM_027843	ENSMUSG00000098207	Arl14	9130014L17Rik|Arf7	ADP-ribosylation factor-like 14	protein-coding
common_peak1-16446-15-21--0.447266868081641-0.448200956659578	chr5	135077756	135078563	+	0	NA	intron (NM_020044, intron 12 of 12)	intron (NM_020044, intron 12 of 12)	12736	NM_022964	56743	Mm.391375	NM_020044	ENSMUSG00000040751	Lat2	AW125574|LAB|NTAL|WSCR5|Wbscr15|Wbscr5	linker for activation of T cells family, member 2	protein-coding
unique_peak2-35727-2-5--1.50241675698448-1.08602067057793	chr18	35067289	35067618	+	0	NA	intron (NM_144866, intron 8 of 10)	intron (NM_144866, intron 8 of 10)	24204	NM_144866	225363	Mm.329353	NM_144866	ENSMUSG00000024360	Etf1	AI463371|D6Ertd109e|ERF|ERF1|SUP45L1|TB3-1	eukaryotic translation termination factor 1	protein-coding
common_peak2-22060-17-23--0.366666162516118-0.383878263347744	chr12	71014970	71015672	+	0	NA	intron (NM_178628, intron 2 of 14)	Lx9|LINE|L1	-21171	NM_201519	399510	Mm.291936	NM_201519	ENSMUSG00000034761	Map4k5	4432415E19Rik|GCKR|KHS|MAPKKKK5	mitogen-activated protein kinase kinase kinase kinase 5	protein-coding
common_peak2-28332-10-8-0.186490343566457-1.078512453669	chr4	134483068	134483518	+	0	NA	TTS (NM_023665)	TTS (NM_023665)	-3602	NM_026780	68592	Mm.29989	NM_026780	ENSMUSG00000028821	Syf2	1110018L13Rik|Cbpin|D4Bwg1551e|Gcipip|Ntc31|mp29|p29	SYF2 homolog, RNA splicing factor (S. cerevisiae)	protein-coding
unique_peak2-38876-4-9--1.34538860874061-1.36011389749466	chr8	14859912	14860422	+	0	NA	Intergenic	B4A|SINE|B4	-28369	NM_012000	26889	Mm.254027	NM_012000	ENSMUSG00000026317	Cln8	mnd	ceroid-lipofuscinosis, neuronal 8	protein-coding
common_peak2-29577-100-121-0.306034437247903-1.02099576852386	chr6	48047363	48049371	+	0	NA	Intergenic	L1M5|LINE|L1	-11775	NM_001163475	69228	Mm.207555	NM_001163475	ENSMUSG00000057691	Zfp746	2810407L07Rik|AI317225|Znf746	zinc finger protein 746	protein-coding
unique_peak1-1119-9-1-2.18961340640422-2.31132995230379	chr11	94431933	94432477	+	0	NA	intron (NM_153807, intron 6 of 15)	intron (NM_153807, intron 6 of 15)	5817	NM_007689	12643	Mm.440523	NM_007689	ENSMUSG00000039084	Chad	SLRR4A	chondroadherin	protein-coding
unique_peak2-38116-8-21--1.45420920068973-1.61268301619756	chr6	72788795	72789403	+	0	NA	Intergenic	Intergenic	-50060	NM_009332	21415	Mm.440067	NM_009332	ENSMUSG00000055799	Tcf7l1	Tcf-3|Tcf3|bHLHb21	transcription factor 7 like 1 (T cell specific, HMG box)	protein-coding
unique_peak2-39931-4-7--1.02346051385325-1.09384600808989	chrX	106186559	106186907	+	0	NA	Intergenic	Intergenic	-10091	NR_033596	70550	Mm.482937	NR_033596	ENSMUSG00000081793	5730416F02Rik	-	capping protein (actin filament), gelsolin-like pseudogene	pseudo
common_peak2-31154-8-5-0.420259917226415-1.10484139239135	chr8	44092891	44093189	+	0	NA	Intergenic	L1Md_A|LINE|L1	133800	NM_177742	244448	Mm.64542	NM_177742	ENSMUSG00000031651	Triml1	4933403D14|BC050188	tripartite motif family-like 1	protein-coding
unique_peak1-2279-21-8-1.39956426382392-2.11898024768848	chr15	79333269	79334241	+	0	NA	intron (NM_008427, intron 1 of 1)	intron (NM_008427, intron 1 of 1)	1916	NM_008427	16520	Mm.140760	NM_008427	ENSMUSG00000044216	Kcnj4	IRK3|Kcnf2|MB-IRK3	potassium inwardly-rectifying channel, subfamily J, member 4	protein-coding
common_peak2-24387-20-35--0.681850216851119-0.950553505527076	chr17	12916403	12917024	+	0	NA	intron (NM_010515, intron 10 of 47)	intron (NM_010515, intron 10 of 47)	-17464	NR_002853	104103	Mm.26553	NR_002853	ENSMUSG00000078247	Airn	2810051F02Rik|2810434M15Rik|AI256653|AI597500|AW049873|Air|B930018I07Rik|D17Ertd663e|IGF2RAS	antisense Igf2r RNA	ncRNA
common_peak1-13157-13-7-0.778472030637769-0.817533494790411	chr19	10565109	10565838	+	0	NA	Intergenic	Intergenic	-8086	NM_133689	67752	Mm.25939	NM_133689	ENSMUSG00000035179	Ppp1r32	4930579J09Rik|AU015816|IIIG9|IIIG9L|IIIG9S	protein phosphatase 1, regulatory subunit 32	protein-coding
common_peak1-17525-54-65-0.12869164227128-0.378729626038611	chr7	28374945	28376621	+	0	NA	promoter-TSS (NM_001110208)	promoter-TSS (NM_001110208)	-796	NM_001110208	11652	Mm.177194	NM_007434	ENSMUSG00000004056	Akt2	2410016A19Rik|AW554154|PKB|PKBbeta	thymoma viral proto-oncogene 2	protein-coding
unique_peak2-36086-4-6--0.830815435910851-0.989110657569874	chr19	56071775	56072228	+	0	NA	Intergenic	Intergenic	102190	NM_001142924	21416	Mm.139815	NM_009333	ENSMUSG00000024985	Tcf7l2	TCF4B|TCF4E|Tcf-4|Tcf4|mTcf-4B|mTcf-4E	transcription factor 7 like 2, T cell specific, HMG box	protein-coding
common_peak2-20203-29-14-1.20539948500659-2.32006591355686	chr1	177623148	177623637	+	0	NA	promoter-TSS (NM_010098)	promoter-TSS (NM_010098)	-629	NM_010098	13603	Mm.32744	NM_010098	ENSMUSG00000026525	Opn3	ERO|Ecpn	opsin 3	protein-coding
common_peak2-28122-17-26--0.53659116395843-0.538442145997695	chr4	89310003	89311130	+	0	NA	Intergenic	Intergenic	-44323	NM_175647	242523	Mm.130167	NM_175647	ENSMUSG00000043753	Dmrta1	Dmrt4	doublesex and mab-3 related transcription factor like family A1	protein-coding
unique_peak1-678-13-8-0.608547029195456-0.660903317613904	chr10	74822629	74823409	+	0	NA	Intergenic	ID4|SINE|ID	8219	NR_033602	544707	Mm.349862	NR_033602		Gm5779	EG544707	ribosomal protein, large, P0 pseudogene	pseudo
unique_peak2-33164-2-7--1.91745425626332-1.45399745587252	chr10	93890048	93890415	+	0	NA	Intergenic	Intergenic	-87371	NM_172051	319880	Mm.23047	NM_172051	ENSMUSG00000020023	Tmcc3	AW488095|C630016B22Rik|C88213|Tmcc1	transmembrane and coiled coil domains 3	protein-coding
common_peak1-18333-12-12--0.0516637330534535-0.309718203022949	chr8	61395904	61396630	+	0	NA	Intergenic	Lx7|LINE|L1	5715	NM_173411	234290	Mm.39244	NM_173411	ENSMUSG00000049946	BC030500	-	cDNA sequence BC030500	protein-coding
common_peak1-12854-14-6-1.09186123830004-1.16633110333236	chr18	75319279	75319882	+	0	NA	intron (NM_027727, intron 13 of 16)	intron (NM_027727, intron 13 of 16)	137391	NR_045394	100503117	Mm.250517	NR_045393		2010010A06Rik	5033420E22Rik	RIKEN cDNA 2010010A06 gene	ncRNA
unique_peak1-1179-14-9-0.577288065470282-0.630231561310125	chr11	100413931	100414729	+	0	NA	intron (NM_028918, intron 5 of 11)	intron (NM_028918, intron 5 of 11)	7384	NM_028918	74407	Mm.31590	NM_028918	ENSMUSG00000006784	Ttc25	4933404O19Rik	tetratricopeptide repeat domain 25	protein-coding
common_peak1-10562-28-13-1.24560419776386-2.25377313481387	chr14	20804740	20805992	+	0	NA	Intergenic	Intergenic	-8895	NM_001285909	14702	Mm.41737	NM_010315	ENSMUSG00000043004	Gng2	82	guanine nucleotide binding protein (G protein), gamma 2	protein-coding
unique_peak1-1505-12-2-2.06381348436648-2.79529063155376	chr13	3726097	3726742	+	0	NA	Intergenic	Intergenic	77145	NM_027416	70405	Mm.20079	NM_027416	ENSMUSG00000063130	Calml3	2310068O22Rik|AI326174	calmodulin-like 3	protein-coding
common_peak1-9728-11-12--0.191746133889479-0.310474156842889	chr12	34487349	34487949	+	0	NA	Intergenic	Intergenic	-125641	NM_033522	114712	Mm.204643	NM_033522	ENSMUSG00000046518	Ferd3l	Mnato3|N-twist|Nato|Nato3|Ntwist|bHLHa31|fer3	Fer3-like (Drosophila)	protein-coding
common_peak1-8392-11-24--1.13516260552311-1.3750876294627	chr10	66354238	66354756	+	0	NA	Intergenic	MIRc|SINE|MIR	-113326	NR_110511	102634101	Mm.445258	NR_110511		LOC102634101	-	uncharacterized LOC102634101	ncRNA
common_peak1-14377-10-5-0.771452844287613-1.33892459842472	chr2	168072843	168073339	+	0	NA	Intergenic	RSINE1|SINE|B4	16969	NM_001160330	69372	Mm.482182	NM_001160330	ENSMUSG00000074576	Mocs3	1700020H17Rik|Uba4	molybdenum cofactor synthesis 3	protein-coding
common_peak2-31850-11-10-0.0492619656143161-0.31137425193576	chr9	46184067	46184713	+	0	NA	Intergenic	Intergenic	-56321	NM_183104	74361	Mm.159169	NM_183104	ENSMUSG00000056617	4931429L15Rik	-	RIKEN cDNA 4931429L15 gene	protein-coding
common_peak2-32029-19-16-0.315224485411347-0.448200956659575	chr9	77482620	77483413	+	0	NA	Intergenic	L1_Mus4|LINE|L1	-1523	NM_172925	244923	Mm.138238	NM_172925	ENSMUSG00000044938	Klhl31	9830147P19Rik|D930047P17Rik|Kbtbd1	kelch-like 31	protein-coding
common_peak1-16846-12-8-0.478850983645327-0.562038191119709	chr6	53615434	53616066	+	0	NA	intron (NM_172728, intron 3 of 6)	intron (NM_172728, intron 3 of 6)	92382	NM_172728	231991	Mm.321138	NM_172728	ENSMUSG00000053007	Creb5	Crebpa|D430026C09Rik	cAMP responsive element binding protein 5	protein-coding
unique_peak2-37164-9-12--0.510826311736872-0.394412252720706	chr4	44012736	44013323	+	0	NA	Intergenic	Lx7|LINE|L1	-12486	NM_016760	12757	Mm.298875	NM_016760	ENSMUSG00000028478	Clta	AV026556|Lca	clathrin, light polypeptide (Lca)	protein-coding
common_peak2-23895-8-15--0.994777582052429-0.771068449301683	chr16	4003860	4004433	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-2468	NM_177472	52864	Mm.29935	NM_177472	ENSMUSG00000039738	Slx4	AI256635|AI426760|Btbd12|D16Bwg1016e	SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae)	protein-coding
common_peak2-20478-9-6-0.382258484346616-1.11707584880836	chr10	44080327	44080724	+	0	NA	TTS (NR_035450)	TTS (NR_035450)	1043	NR_035450	100316688		NR_035450		Mir1929	mmu-mir-1929	microRNA 1929	ncRNA
unique_peak1-3529-20-2-2.90311228387004-4.53603905993749	chr19	20653688	20654569	+	0	NA	Intergenic	Intergenic	-22344	NM_013467	11668	Mm.250866	NM_013467	ENSMUSG00000053279	Aldh1a1	Ahd-2|Ahd2|Aldh1|Aldh1a2|E1|Raldh1	aldehyde dehydrogenase family 1, subfamily A1	protein-coding
unique_peak2-35913-5-23--2.28934283672701-3.02403524675804	chr19	5294552	5295528	+	0	NA	intron (NM_030109, intron 2 of 20)	intron (NM_030109, intron 2 of 20)	415	NM_030109	319322	Mm.196532	NM_030109	ENSMUSG00000024853	Sf3b2	145kDa|2610311M13Rik|2810441F20Rik|B230398H18Rik|SAP145|SF3b1|SF3b145|SF3b150	splicing factor 3b, subunit 2	protein-coding
common_peak2-26582-11-14--0.398197011356905-0.379391706698377	chr2	105904730	105905251	+	0	NA	Intergenic	Intergenic	-61284	NR_033993	99349	Mm.25661	NM_026992	ENSMUSG00000027166	Dnajc24	1700030A21Rik|2610027M02Rik|AV066965|AW240712|Dph4|MmDjC7|Zcsl3	DnaJ (Hsp40) homolog, subfamily C, member 24	protein-coding
common_peak1-15203-23-45--0.801794451547932-1.41868709588403	chr4	15957907	15958824	+	0	NA	Intergenic	RLTR13A3|LTR|ERVK	-17341	NM_145950	209212	Mm.46455	NM_145950	ENSMUSG00000041153	Osgin2	BC010311|C230027H09Rik	oxidative stress induced growth inhibitor family member 2	protein-coding
unique_peak1-3082-13-0-3.77847203063777-4.51544993495972	chr18	22319116	22319565	+	0	NA	intron (NM_027616, intron 2 of 22)	CT-rich|Low_complexity|Low_complexity	10557	NM_027616	70950	Mm.235716	NM_027616	ENSMUSG00000024306	Ccdc178	4921528I01Rik	coiled coil domain containing 178	protein-coding
unique_peak1-314-24-7-1.79320990276772-3.23080944932562	chr1	131286896	131287711	+	0	NA	intron (NM_172485, intron 1 of 27)	intron (NM_172485, intron 1 of 27)	117422	NM_172485	210417	Mm.380518	NM_172485	ENSMUSG00000042581	Thsd7b	1700074E13Rik|B930082A18|D130067I03Rik	thrombospondin, type I, domain containing 7B	protein-coding
common_peak1-18048-16-25--0.58217607587303-0.633951497070961	chr7	144938205	144938941	+	0	NA	Intergenic	URR1A|DNA|MER1_type	309216	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
common_peak1-15276-22-35--0.522640896354908-0.664636481544818	chr4	34882269	34883230	+	0	NA	Intergenic	RLTR13A2|LTR|ERVK	-24019	NR_040652	73696	Mm.1361	NR_040652	ENSMUSG00000085824	2410114N07Rik	-	RIKEN cDNA 2410114N07 gene	ncRNA
unique_peak2-36247-6-8--0.60452689106201-1.03789460276074	chr2	46443255	46443722	+	0	NA	Intergenic	Lx9|LINE|L1	891363	NR_040497	69405	Mm.396184	NR_040497	ENSMUSG00000086202	1700019E08Rik	-	RIKEN cDNA 1700019E08 gene	ncRNA
unique_peak1-3511-11-3-1.50869358425161-1.95434855131066	chr19	16273876	16274485	+	0	NA	intron (NM_008139, intron 1 of 6)	intron (NM_008139, intron 1 of 6)	35592	NR_033228	595139	Mm.405662	NR_033228		E030024N20Rik	9030417F11Rik|Ppia-ps8	peptidylprolyl isomerase A pseudogene 8	pseudo
unique_peak2-32536-14-20--0.493101262421116-0.456667090758524	chr1	66816040	66816880	+	0	NA	intron (NM_001122738, intron 5 of 14)	intron (NM_001122738, intron 5 of 14)	47709	NM_177645	68691	Mm.240912	NM_177645	ENSMUSG00000026004	Kansl1l	1110028C15Rik|1190030G24|AI427598|C430010P07Rik|mKIAA4189	KAT8 regulatory NSL complex subunit 1-like	protein-coding
unique_peak2-39542-0-6--3.64748585253182-1.56314192529759	chr9	67079296	67079668	+	0	NA	intron (NM_001081242, intron 53 of 57)	intron (NM_001081242, intron 53 of 57)	5051	NR_029576	387185		NR_029576		Mir190a	Mir190|Mirn190|mir-190|mmu-mir-190|mmu-mir-190a	microRNA 190a	ncRNA
common_peak2-25477-9-6-0.382258484346616-1.11707584880836	chr19	4756474	4756875	+	0	NA	intron (NM_025717, intron 1 of 3)	CpG	149	NM_025717	66704	Mm.396734	NM_025717	ENSMUSG00000033760	Rbm4b	4921506I22Rik|AI504630|AI506404|Lark2	RNA binding motif protein 4B	protein-coding
unique_peak1-7234-9-2-1.60465090568306-1.87199725847353	chr9	75772892	75773418	+	0	NA	Intergenic	Intergenic	-89629	NM_173731	208982	Mm.82306	NM_173731	ENSMUSG00000007908	Hmgcll1	BC037381	3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1	protein-coding
common_peak2-32365-19-22--0.120874629395327-0.306080386793804	chrX	101331867	101332625	+	0	NA	intron (NM_001077354, intron 1 of 4)	L1Md_F2|LINE|L1	-20633	NR_030430	751535		NR_030430	miRBase:MI0004258	Mir672	Mirn672|mmu-mir-672	microRNA 672	ncRNA
common_peak1-19179-38-41-0.17913523651977-0.420706537898431	chr9	97110281	97111583	+	0	NA	Intergenic	Intergenic	-99472	NM_138756	192287	Mm.228067	NM_138756	ENSMUSG00000032449	Slc25a36	C330005L02Rik	solute carrier family 25, member 36	protein-coding
unique_peak1-5214-6-7--0.434601889619698-0.97990265578305	chr5	36194519	36194992	+	0	NA	intron (NM_001177700, intron 13 of 16)	intron (NM_001177700, intron 13 of 16)	-41213	NM_027373	70292	Mm.125167	NM_027373	ENSMUSG00000029094	Afap1	2600003E23Rik|9630044L16Rik|AI848729|Afap|mKIAA3018	actin filament associated protein 1	protein-coding
unique_peak1-3993-13-6-0.971117108580164-1.01572999746118	chr2	35215025	35215549	+	0	NA	intron (NM_029463, intron 4 of 5)	intron (NM_029463, intron 4 of 5)	7962	NM_029463	75859	Mm.159604	NM_029463	ENSMUSG00000026882	4930568D16Rik	Ggta1l1	RIKEN cDNA 4930568D16 gene	protein-coding
unique_peak1-2446-13-7-0.778472030637769-0.817533494790411	chr15	102010391	102011188	+	0	NA	intron (NM_144942, intron 8 of 14)	B4|SINE|B4	8685	NM_144942	246277	Mm.296382	NM_144942	ENSMUSG00000023044	Csad	Csd	cysteine sulfinic acid decarboxylase	protein-coding
unique_peak2-33118-3-7--1.41398308995928-1.23214870625617	chr10	81349953	81350302	+	0	NA	Intergenic	Intergenic	23448	NM_001243067	73610	Mm.490466	NM_001243067		Zfp433	1700123A16Rik	RIKEN cDNA 1700123A16 gene	protein-coding
unique_peak2-37004-2-8--2.08737925770563-1.65811743852845	chr3	122087949	122088510	+	0	NA	Intergenic	Intergenic	-34469	NM_013867	29815	Mm.45815	NM_013867	ENSMUSG00000028121	Bcar3	AI131758|AND-34	breast cancer anti-estrogen resistance 3	protein-coding
common_peak1-12141-15-8-0.842239749113344-0.891319708951327	chr17	27797112	27797921	+	0	NA	intron (NM_001286744, intron 1 of 9)	RSINE1|SINE|B4	4980	NM_001286743	23969	Mm.4926	NM_011861	ENSMUSG00000040276	Pacsin1	A830061D09Rik|H74|mKIAA1379|syndapin	protein kinase C and casein kinase substrate in neurons 1	protein-coding
common_peak2-23024-45-43-0.400926406707574-0.786568022251753	chr14	65097331	65098309	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-23080	NM_026322	110265	Mm.26713	NM_026322	ENSMUSG00000054733	Msra	2310045J23Rik|6530413P12Rik|MSR-A	methionine sulfoxide reductase A	protein-coding
unique_peak1-4970-7-3-0.799090830298189-1.23214870625617	chr4	107001261	107001704	+	0	NA	intron (NM_001205156, intron 3 of 8)	intron (NM_001205156, intron 3 of 8)	14514	NM_001205156	230584	Mm.29118	NM_145550	ENSMUSG00000057375	Yipf1	C030002N13Rik	Yip1 domain family, member 1	protein-coding
common_peak2-23077-8-6-0.197867495889966-1.03789460276074	chr14	74733088	74733507	+	0	NA	Intergenic	Intergenic	-22037	NR_046059	74425	Mm.399498	NR_046059		4933402J15Rik	-	RIKEN cDNA 4933402J15 gene	ncRNA
common_peak1-7498-16-11-0.533301141546906-0.58239619684445	chr1	12777267	12778037	+	0	NA	intron (NM_001198566, intron 3 of 20)	intron (NM_001198566, intron 3 of 20)	69026	NM_172294	240725	Mm.45563	NM_172294	ENSMUSG00000016918	Sulf1	AI467640|AW121680|mKIAA1077	sulfatase 1	protein-coding
common_peak2-28607-13-26--0.9764154715257-1.09492971584134	chr5	23850502	23851241	+	0	NA	intron (NM_013569, intron 2 of 14)	intron (NM_013569, intron 2 of 14)	6551	NM_013569	16511	Mm.6539	NM_013569	ENSMUSG00000038319	Kcnh2	AI326795|ERG1|LQT|Lqt2|M-erg|Merg1|merg1a|merg1b	potassium voltage-gated channel, subfamily H (eag-related), member 2	protein-coding
common_peak1-8212-12-17--0.521149016354673-0.417187467413082	chr10	7792340	7792915	+	0	NA	Intergenic	MTB|LTR|MaLR	-116706	NM_138667	68652	Mm.193041	NM_138667	ENSMUSG00000015755	Tab2	1110030N06Rik|A530078N03Rik|Map3k7ip2|mKIAA0733	TGF-beta activated kinase 1/MAP3K7 binding protein 2	protein-coding
common_peak2-28876-10-4-1.03448725012141-1.5150158574804	chr5	77375537	77375940	+	0	NA	intron (NM_172146, intron 1 of 10)	intron (NM_172146, intron 1 of 10)	-4698	NM_025939	67054	Mm.182931	NM_025939	ENSMUSG00000029247	Paics	2610511I09Rik|ADE2H1|AIRC|PAIS	phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase	protein-coding
common_peak1-14035-8-3-1.00522241794757-1.39487600375387	chr2	117745442	117745966	+	0	NA	Intergenic	Intergenic	98040	NR_040631	73938	Mm.399107	NR_040631	ENSMUSG00000086221	4930412B13Rik	-	RIKEN cDNA 4930412B13 gene	ncRNA
common_peak2-24711-23-41--0.67054991826968-1.0364730969458	chr17	46282238	46283071	+	0	NA	Intergenic	URR1B|DNA|MER1_type	-1507	NM_029338	75564	Mm.17993	NM_029338	ENSMUSG00000023966	Rsph9	1700027N10Rik	radial spoke head 9 homolog (Chlamydomonas)	protein-coding
common_peak1-14130-39-73--0.593692118709797-1.33296683454087	chr2	130839313	130840726	+	0	NA	intron (NM_009730, intron 25 of 28)	B1F2|SINE|Alu	26115	NR_105969	102465606		NR_105969		Mir6973b	mmu-mir-6973b	microRNA mir-6973b	ncRNA
common_peak2-27783-114-285--0.695916815070022-5.83434853395861	chr3	135438263	135440193	+	0	NA	Intergenic	Intergenic	-49015	NM_026228	67547	Mm.30239	NM_026228	ENSMUSG00000053897	Slc39a8	4933419D20Rik|AA986696|BIGM103|ZIP-8|Zip8	solute carrier family 39 (metal ion transporter), member 8	protein-coding
common_peak2-24762-25-27-0.0544949832875021-0.316543811862083	chr17	56183058	56183924	+	0	NA	exon (NM_013733, exon 2 of 14)	exon (NM_013733, exon 2 of 14)	3652	NM_013733	27221	Mm.391010	NM_013733	ENSMUSG00000002835	Chaf1a	AL023013|AL024058|CAF-1|Cac1p	chromatin assembly factor 1, subunit A (p150)	protein-coding
unique_peak1-4662-10-0-3.35641534500877-3.31132995230379	chr3	90656418	90656912	+	0	NA	Intergenic	L1VL4|LINE|L1	125837	NM_207263	384997	Mm.316644	NM_207263	ENSMUSG00000042250	Pglyrp4	Gm1478|Gm413	peptidoglycan recognition protein 4	protein-coding
common_peak1-11830-12-7-0.648775985087639-0.697979855752659	chr16	79879269	79879853	+	0	NA	Intergenic	Intergenic	-788219	NM_178855	19146	Mm.5184	NM_008941	ENSMUSG00000022857	Tmprss15	Entk|Prss7	transmembrane protease, serine 15	protein-coding
unique_peak1-1439-12-4-1.32684789020028-2.04196296489515	chr12	100199005	100199541	+	0	NA	intron (NM_198311, intron 8 of 14)	intron (NM_198311, intron 8 of 14)	40451	NM_198311	76260	Mm.282660	NM_029553	ENSMUSG00000021013	Ttc8	0610012F22Rik|AV001447|BBS8	tetratricopeptide repeat domain 8	protein-coding
unique_peak2-38807-6-6--0.241956811677302-0.947717972411649	chr7	133776344	133776714	+	0	NA	Intergenic	Intergenic	-7545	NM_019738	56312	Mm.18742	NM_019738		Nupr1	2310032H04Rik|Com1|p8	nuclear protein transcription regulator 1	protein-coding
unique_peak1-5694-13-3-1.77847203063777-2.58603100924543	chr6	34479270	34479773	+	0	NA	Intergenic	Intergenic	53165	NM_007563	12183	Mm.282863	NM_007563	ENSMUSG00000038871	Bpgm	AI323730|AL022789|C86192	2,3-bisphosphoglycerate mutase	protein-coding
unique_peak1-3121-8-0-3.00522241794757-2.70926996097583	chr18	35031505	35032065	+	0	NA	Intergenic	Intergenic	10924	NM_007913	13653	Mm.181959	NM_007913		Egr1	A530045N19Rik|ETR103|Egr-1|Krox-1|Krox-24|Krox24|NGF1-A|NGFI-A|NGFIA|TIS8|Zenk|Zfp-6|Zif268|egr	early growth response 1	protein-coding
unique_peak1-7404-17-3-2.21829633820504-3.11807310444576	chrX	126766759	126767509	+	0	NA	intron (NM_172493, intron 23 of 26)	intron (NM_172493, intron 23 of 26)	482856	NM_172493	54004	Mm.10763	NM_017398	ENSMUSG00000034480	Diap2	Dia3|Diaph2|Drf2|E430022I22Rik	diaphanous homolog 2 (Drosophila)	protein-coding
common_peak1-11305-32-47--0.305870481501496-0.462861812831739	chr15	84191619	84192789	+	0	NA	Intergenic	ORR1A2|LTR|MaLR	35655	NM_001162500	64099	Mm.251356	NM_022321	ENSMUSG00000022439	Parvg	AI413459	parvin, gamma	protein-coding
unique_peak1-5857-11-3-1.50869358425161-1.95434855131066	chr6	84214854	84215396	+	0	NA	Intergenic	Intergenic	158707	NR_046063	100038556	Mm.387783	NR_046063		Gm10445	ENSMUSG00000072956	predicted gene 10445	ncRNA
common_peak1-18746-24-27--0.0141450192898871-0.304978344874324	chr8	124949299	124950207	+	0	NA	intron (NM_001301284, intron 4 of 4)	ID_B1|SINE|B4	3768	NM_145834	234836	Mm.222808	NM_145834	ENSMUSG00000046108	Il17c	IL-17C	interleukin 17C	protein-coding
common_peak1-8942-12-26--1.10611151707583-1.26025077975594	chr11	53763734	53764350	+	0	NA	TTS (NM_019723)	TTS (NM_019723)	29487	NM_019723	56517	Mm.154284	NM_019723	ENSMUSG00000063652	Slc22a21	Octn3|Slc22a9	solute carrier family 22 (organic cation transporter), member 21	protein-coding
common_peak2-26916-10-12--0.344024373132323-0.340565874754526	chr2	163344932	163345595	+	0	NA	intron (NR_027970, intron 1 of 3)	MT2_Mm|LTR|ERVL	22194	NR_027970	68314	Mm.46190	NM_197983	ENSMUSG00000046840	Hnf4aos	0610008F07Rik	hepatic nuclear factor 4 alpha, opposite strand	ncRNA
common_peak2-25872-39-45-0.0921992908621405-0.338002390994162	chr19	43752573	43753571	+	0	NA	Intergenic	L1MB5|LINE|L1	3404	NR_045645	100502982	Mm.313570	NR_045645		BC037704	-	cDNA sequence BC037704	ncRNA
common_peak2-20084-48-69--0.158355865710152-0.360272380583625	chr1	155098087	155099649	+	0	NA	intron (NM_010683, intron 5 of 27)	intron (NM_010683, intron 5 of 27)	-65291	NM_008485	16782	Mm.329272	NM_008485	ENSMUSG00000026479	Lamc2	AA589349	laminin, gamma 2	protein-coding
common_peak1-13843-33-36-0.121884196896579-0.346766333527252	chr2	60639231	60640753	+	0	NA	intron (NM_001141932, intron 2 of 14)	intron (NM_001141932, intron 2 of 14)	-79332	NM_001159564	16420	Mm.98193	NM_021359	ENSMUSG00000026971	Itgb6	2210409C20Rik|4831415H04Rik	integrin beta 6	protein-coding
common_peak2-26054-14-21--0.560215458279653-0.519193887192484	chr2	30899469	30900272	+	0	NA	intron (NM_001038700, intron 9 of 14)	intron (NM_001038700, intron 9 of 14)	52150	NM_001177650	14269	Mm.52297	NM_019406	ENSMUSG00000075415	Fnbp1	1110057E06Rik|2210010H06Rik|FBP1|Fbp17	formin binding protein 1	protein-coding
common_peak1-7813-44-108--0.946291490208391-3.78076085084899	chr1	125434068	125435722	+	0	NA	intron (NM_199021, intron 5 of 25)	B3A|SINE|B2	507241	NM_199021	269109	Mm.483255	NM_199021	ENSMUSG00000036815	Dpp10	6430601K09Rik|DPP X|Dprp3	dipeptidylpeptidase 10	protein-coding
unique_peak1-6554-6-1-1.5653981103803-1.56314192529759	chr7	130639581	130640101	+	0	NA	intron (NM_001081329, intron 2 of 6)	intron (NM_001081329, intron 2 of 6)	4122	NM_001081329	210162	Mm.135397	NM_175435	ENSMUSG00000030757	Zkscan2	9430065N20Rik|AW493225|Zfp694	zinc finger with KRAB and SCAN domains 2	protein-coding
unique_peak2-34238-3-6--1.22133801201688-1.08602067057793	chr13	53299166	53299580	+	0	NA	intron (NM_013846, intron 1 of 8)	intron (NM_013846, intron 1 of 8)	82105	NM_013846	26564	Mm.342774	NM_013846	ENSMUSG00000021464	Ror2	Ntrkr2|mRor2	receptor tyrosine kinase-like orphan receptor 2	protein-coding
common_peak2-29274-118-242--0.401019820483207-2.02111693178074	chr5	142821814	142824213	+	0	NA	Intergenic	GA-rich|Low_complexity|Low_complexity	-54438	NM_199068	17425	Mm.24214	NM_010812	ENSMUSG00000056493	Foxk1	A630048H08Rik|AI463295|ENSMUSG00000075577|Gm10868|Mnf	forkhead box K1	protein-coding
unique_peak2-36929-5-14--1.61127093161437-1.95509489018123	chr3	102152347	102153090	+	0	NA	Intergenic	L1MC4|LINE|L1	86390	NR_040391	319951	Mm.225196	NR_040391		A230001M10Rik	-	RIKEN cDNA A230001M10 gene	ncRNA
common_peak2-24347-149-270--0.153188544117797-0.586738552955266	chr17	5840622	5842461	+	0	NA	exon (NM_025664, exon 1 of 18)	exon (NM_025664, exon 1 of 18)	161	NM_025664	66616	Mm.89515	NM_025664	ENSMUSG00000002365	Snx9	2700073N08Rik|SDP1|SH3PX1	sorting nexin 9	protein-coding
unique_peak2-37228-9-18--1.05831410703937-0.965105923112245	chr4	88796526	88797317	+	0	NA	intron (NM_024433, intron 2 of 7)	B2_Mm2|SINE|B2	13647	NM_024433	66902	Mm.28500	NM_024433	ENSMUSG00000062937	Mtap	1300019I21Rik|MSAP	methylthioadenosine phosphorylase	protein-coding
common_peak2-20967-10-12--0.344024373132323-0.340565874754526	chr11	20455221	20455803	+	0	NA	intron (NM_021372, intron 1 of 1)	B3|SINE|B2	12256	NM_021372	58172	Mm.339676	NM_021372	ENSMUSG00000049800	Sertad2	AB041541|AU021878|Kiaa0127|SEI-2|Sei2|TRIP-Br2|mKIAA0127	SERTA domain containing 2	protein-coding
common_peak1-9711-18-26--0.441968350935117-0.471456499375593	chr12	29937625	29938528	+	0	NA	Intergenic	Intergenic	-275173	NM_001093775	17933	Mm.253067	NM_008666	ENSMUSG00000061911	Myt1l	2900046C06Rik|2900093J19Rik|C630034G21Rik|Nztf1|Pmng1|Png-1|mKIAA1106	myelin transcription factor 1-like	protein-coding
unique_peak2-35752-9-6-0.382258484346616-1.11707584880836	chr18	38628772	38629320	+	0	NA	Intergenic	B3|SINE|B2	50417	NM_022996	65113	Mm.102496	NM_022996	ENSMUSG00000024425	Ndfip1	0610010M22Rik|N4wbp5	Nedd4 family interacting protein 1	protein-coding
unique_peak2-35265-13-19--0.543456064249594-0.466170754204149	chr17	47611068	47612007	+	0	NA	Intergenic	Intergenic	27699	NM_022015	63856	Mm.275901	NM_022015	ENSMUSG00000023980	Taf8	AW260255|Tbn	TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factorq	protein-coding
common_peak2-26366-7-6--0.00826409175941478-0.97990265578305	chr2	38925398	38925730	+	0	NA	3' UTR (NM_178778, exon 18 of 18)	3' UTR (NM_178778, exon 18 of 18)	-4503	NM_029793	76899	Mm.131098	NM_029793	ENSMUSG00000026754	Golga1	0710001G09Rik|2210418B03Rik|AW107649|Golgi97|golgin-97	golgi autoantigen, golgin subfamily a, 1	protein-coding
common_peak2-22942-32-54--0.502267694305-0.828688081372012	chr14	47649054	47650248	+	0	NA	intron (NM_028966, intron 3 of 11)	L1_Mus1|LINE|L1	28636	NM_001163433	74480	Mm.214454	NM_028966	ENSMUSG00000021838	Samd4	1700024G08Rik|1700111L17Rik|4933436G17Rik|Samd4a|Smaug|Smaug1	sterile alpha motif domain containing 4	protein-coding
common_peak1-15899-25-57--0.996131089782466-2.3171515282213	chr5	17574446	17575422	+	0	NA	Intergenic	Intergenic	106546	NM_001081143	242851	Mm.332230	NM_001081143	ENSMUSG00000028777	Gnat3	Ggust|Gtn	guanine nucleotide binding protein, alpha transducing 3	protein-coding
common_peak2-26017-33-13-1.52398264046792-3.43266191012053	chr19	57600314	57600881	+	0	NA	Intergenic	Intergenic	17041	NR_040307	78073	Mm.12411	NR_040306		6720468P15Rik	-	RIKEN cDNA 6720468P15 gene	ncRNA
common_peak1-17500-7-8--0.370834171144123-1.00793137938329	chr7	25376697	25377213	+	0	NA	intron (NM_023154, intron 1 of 7)	intron (NM_023154, intron 1 of 7)	-4295	NM_001033205	101544	Mm.20117	NM_001033205	ENSMUSG00000066721	Zfp575	AI326876|Znf575	zinc finger protein 575	protein-coding
unique_peak2-33138-4-9--1.34538860874061-1.36011389749466	chr10	83360295	83360816	+	0	NA	Intergenic	Tigger13a|DNA|MER2_type	174945	NM_001145198	69784	Mm.271188	NM_001145198	ENSMUSG00000087651	1500009L16Rik	2700050C19Rik|OCC-1	RIKEN cDNA 1500009L16 gene	protein-coding
common_peak2-23479-62-91--0.112810497254928-0.345455084168684	chr15	74708625	74709715	+	0	NA	3' UTR (NM_025929, exon 3 of 3)	3' UTR (NM_025929, exon 3 of 3)	2964	NM_025929	67038	Mm.154566	NM_025929	ENSMUSG00000063522	2010109I03Rik	-	RIKEN cDNA 2010109I03 gene	protein-coding
common_peak1-8577-7-7--0.200909169701811-0.97990265578305	chr10	99062911	99063412	+	0	NA	Intergenic	Intergenic	-8644	NR_038019	100504202	Mm.403801	NR_038019		Gm20110	-	predicted gene, 20110	ncRNA
common_peak1-13963-9-7-0.18961340640422-1.05908390183068	chr2	92185038	92185434	+	0	NA	intron (NM_138755, intron 10 of 17)	Charlie25|DNA|MER1_type	25978	NM_001290774	228366	Mm.31158	NM_172670	ENSMUSG00000040434	Gyltl1b	5730485C17Rik|AI891893|Large2|Largel|mKIAA4105	glycosyltransferase-like 1B	protein-coding
unique_peak1-6205-21-5-1.98452676454508-3.24127775360835	chr7	99351697	99352617	+	0	NA	intron (NM_001243046, intron 4 of 14)	intron (NM_001243046, intron 4 of 14)	-31323	NM_001243047	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
unique_peak2-37544-7-12--0.901348887842903-1.31827279259406	chr5	30887318	30887995	+	0	NA	intron (NR_040427, intron 1 of 3)	intron (NR_040427, intron 1 of 3)	-2887	NM_010608	16527	Mm.439936	NM_010608	ENSMUSG00000049265	Kcnk3	TASK|Task-1|cTBAK-1	potassium channel, subfamily K, member 3	protein-coding
common_peak2-29601-19-16-0.315224485411347-0.448200956659575	chr6	51523782	51524478	+	0	NA	intron (NM_028035, intron 2 of 6)	ID_B1|SINE|B4	29608	NM_001127348	71982	Mm.294166	NM_028035	ENSMUSG00000038301	Snx10	2410004M09Rik	sorting nexin 10	protein-coding
unique_peak1-1375-22-1-3.6472841050874-6.28700305248716	chr12	49511109	49512023	+	0	NA	Intergenic	ERVL-B4-int|LTR|ERVL	-972304	NM_001160112	15228	Mm.4704	NM_008241	ENSMUSG00000020950	Foxg1	2900064B05Rik|BF-1|Bf1|Hfh9|Hfhbf1	forkhead box G1	protein-coding
common_peak1-9732-11-16--0.578769256998726-0.503257505534083	chr12	40223577	40224167	+	0	NA	Intergenic	Lx4B|LINE|L1	540091	NM_007487	11861	Mm.12723	NM_007487	ENSMUSG00000047446	Arl4a	AI467555|Arl4	ADP-ribosylation factor-like 4A	protein-coding
unique_peak1-6626-11-5-0.923731083530457-1.477227296591	chr8	8608158	8608810	+	0	NA	Intergenic	Intergenic	52289	NM_010111	13642	Mm.209813	NM_010111	ENSMUSG00000001300	Efnb2	ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1	ephrin B2	protein-coding
common_peak2-27047-16-6-1.31090872021046-1.49151883326344	chr2	180249534	180249997	+	0	NA	intron (NM_018766, intron 1 of 3)	intron (NM_018766, intron 1 of 3)	15084	NM_018766	18216	Mm.301712	NM_018766	ENSMUSG00000027568	Ntsr1	NT-1R|NTR-1|NTR1	neurotensin receptor 1	protein-coding
unique_peak1-4632-24-11-1.20824740204656-1.9654245668484	chr3	84318854	84319934	+	0	NA	intron (NM_001293801, intron 6 of 7)	intron (NM_001293801, intron 6 of 7)	-35033	NM_001033301	229474	Mm.331107	NM_001033301		Fhdc1	6330505N24Rik|Gm126	FH2 domain containing 1	protein-coding
unique_peak1-7322-8-2-1.42025991722641-1.65811743852845	chr9	120906302	120906847	+	0	NA	intron (NM_177589, intron 35 of 36)	intron (NM_177589, intron 35 of 36)	42370	NR_106058	102465661		NR_106058		Mir7090	mmu-mir-7090	microRNA mir-7090	ncRNA
common_peak2-27855-12-11-0.0638134843664826-0.337263207250336	chr3	152522117	152522714	+	0	NA	intron (NM_012028, intron 2 of 4)	GA-rich|Low_complexity|Low_complexity	122756	NM_012028	26938	Mm.40915	NM_012028		St6galnac5	AI851940|Siat7e	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	protein-coding
common_peak2-19605-39-48-0.00105140280394522-0.303268666669768	chr1	33907385	33908496	+	0	NA	TTS (NM_177235)	TTS (NM_177235)	-12181	NM_001161816	433287	Mm.383632	NM_001161816		Gm15455	AA692849|OTTMUSG00000022109	predicted gene 15455	protein-coding
unique_peak1-4921-16-2-2.53330114154691-3.78760380288747	chr4	57202159	57202971	+	0	NA	Intergenic	B2_Mm1a|SINE|B2	17622	NR_040669	329851	Mm.392470	NR_040669	ENSMUSG00000085967	Gm12530	D730003B17|OTTMUSG00000007337	predicted gene 12530	ncRNA
common_peak2-32432-21-38--0.715912953596013-0.993451450456403	chrX	169319641	169320497	+	0	NA	Intergenic	Intergenic	-2903220	NR_029457	654820	Mm.34441	NM_001039559	ENSMUSG00000072844	G530011O06Rik	-	RIKEN cDNA G530011O06 gene	ncRNA
unique_peak2-33490-8-21--1.45420920068973-1.61268301619756	chr11	70687402	70688165	+	0	NA	intron (NM_001291143, intron 2 of 18)	intron (NM_001291143, intron 2 of 18)	29520	NM_001291142	54189	Mm.7087	NM_019400	ENSMUSG00000020817	Rabep1	Rab5ep|rabaptin-5|rabaptin-5alpha	rabaptin, RAB GTPase binding effector protein 1	protein-coding
common_peak1-13120-35-38-0.145968039600255-0.368093376636814	chr19	8965663	8967026	+	0	NA	Intergenic	Intergenic	-1133	NM_176843	109077	Mm.290474	NM_176843	ENSMUSG00000071652	Ints5	1110055N21Rik|mKIAA1698	integrator complex subunit 5	protein-coding
unique_peak1-5094-7-4-0.477162735410827-1.09384600808989	chr4	149789689	149790047	+	0	NA	intron (NM_001085492, intron 2 of 22)	intron (NM_001085492, intron 2 of 22)	133843	NM_001085492	68703	Mm.291274	NM_001085492	ENSMUSG00000039852	Rere	1110033A15Rik|AI414665|ARG|ARP|ATN1L|AW742570|Atr2|DNB1|eye<m03Jus>|eyes3|mKIAA0458	arginine glutamic acid dipeptide (RE) repeats	protein-coding
unique_peak2-34416-1-5--2.2120195109379-1.32905871926422	chr14	14672794	14673155	+	0	NA	Intergenic	L1_Mus1|LINE|L1	120853	NM_001285780	66231	Mm.295875	NM_025435	ENSMUSG00000053453	Thoc7	Nif3l1bp1	THO complex 7 homolog (Drosophila)	protein-coding
unique_peak1-5177-16-6-1.31090872021046-1.49151883326344	chr5	30286152	30286916	+	0	NA	intron (NR_105781, intron 2 of 2)	HAL1|LINE|L1	-53167	NM_031168	16193	Mm.1019	NM_031168	ENSMUSG00000025746	Il6	Il-6	interleukin 6	protein-coding
unique_peak2-36765-2-9--2.23938235115068-1.87199725847353	chr3	65352678	65353203	+	0	NA	intron (NM_178892, intron 4 of 5)	intron (NM_178892, intron 4 of 5)	-19604	NR_027955	71004	Mm.475465	NM_001033527	ENSMUSG00000074580	4931440P22Rik	-	RIKEN cDNA 4931440P22 gene	ncRNA
unique_peak2-33768-8-20--1.38709500483119-1.45476480588849	chr11	118247793	118248190	+	0	NA	Intergenic	L1Md_F2|LINE|L1	15254	NM_011150	19039	Mm.3152	NM_011150	ENSMUSG00000033880	Lgals3bp	90K|CyCAP|MAC-2BP|Ppicap|Tango10b	lectin, galactoside-binding, soluble, 3 binding protein	protein-coding
common_peak2-24836-51-116--0.795440893980832-3.1851083127818	chr17	74294114	74295966	+	0	NA	intron (NM_011723, intron 1 of 35)	(TG)n|Simple_repeat|Simple_repeat	4496	NM_011723	22436	Mm.11223	NM_011723	ENSMUSG00000024066	Xdh	XO|Xor|Xox-1|Xox1	xanthine dehydrogenase	protein-coding
unique_peak1-2746-17-4-1.89636824331768-2.60953805094651	chr17	43220428	43221355	+	0	NA	intron (NM_178589, intron 4 of 5)	B3A|SINE|B2	67387	NM_178589	94185	Mm.200792	NM_178589	ENSMUSG00000023915	Tnfrsf21	AA959878|DR6|R74815|TR7	tumor necrosis factor receptor superfamily, member 21	protein-coding
common_peak1-9961-14-9-0.577288065470282-0.630231561310125	chr12	112586229	112586867	+	0	NA	intron (NM_183016, intron 1 of 36)	(CTG)n|Simple_repeat|Simple_repeat	29381	NM_183016	217866	Mm.27397	NM_183016	ENSMUSG00000021279	Cdc42bpb	MRCKb	CDC42 binding protein kinase beta	protein-coding
common_peak1-18102-23-10-1.26233588587178-1.90052685918624	chr8	126844603	126845531	+	0	NA	intron (NM_139272, intron 3 of 15)	Lx9|LINE|L1	89773	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
common_peak2-26188-19-13-0.595332404604082-0.713635438203849	chr2	25210872	25211395	+	0	NA	exon (NM_031843, exon 4 of 13)	exon (NM_031843, exon 4 of 13)	719	NM_031843	83768	Mm.21440	NM_031843	ENSMUSG00000026958	Dpp7	DPPII|Dpp2|QPP	dipeptidylpeptidase 7	protein-coding
unique_peak2-34320-3-6--1.22133801201688-1.08602067057793	chr13	95890864	95891219	+	0	NA	intron (NM_172263, intron 2 of 19)	intron (NM_172263, intron 2 of 19)	101964	NM_001170669	218461	Mm.100167	NM_172263	ENSMUSG00000021684	Pde8b	B230331L10Rik|C030047E14Rik	phosphodiesterase 8B	protein-coding
unique_peak1-7287-12-2-2.06381348436648-2.79529063155376	chr9	107312891	107313406	+	0	NA	intron (NM_001174048, intron 1 of 37)	intron (NM_001174048, intron 1 of 37)	10937	NM_020263	56808	Mm.273084	NM_020263	ENSMUSG00000010066	Cacna2d2	Cacna2d|a2d2|du|mKIAA0558|td|torpid	calcium channel, voltage-dependent, alpha 2/delta subunit 2	protein-coding
unique_peak1-6151-24-6-1.98585498071011-3.65509904868667	chr6	135340466	135341556	+	0	NA	Intergenic	Intergenic	23500	NM_001288627	13730	Mm.182785	NM_010128	ENSMUSG00000030208	Emp1	I-8-09|TMP	epithelial membrane protein 1	protein-coding
unique_peak1-5594-26-7-1.92789909215846-3.64499996644214	chr6	31112678	31113554	+	0	NA	intron (NR_110471, intron 2 of 3)	intron (NR_110471, intron 2 of 3)	55358	NR_110470	232685	Mm.443019	NM_144555		Lincpint	MNCb-1768|Pint|linc-Pint	long intergenic non-protein coding RNA, Trp53 induced transcript	ncRNA
common_peak1-7964-61-84--0.0266416063883614-0.302330286314607	chr1	155972625	155974195	+	0	NA	Intergenic	L1_Mur2|LINE|L1	-74907	NM_001204908	100503355	Mm.484410	NM_001204908	ENSMUSG00000066797	Zfp648	ENSMUSG00000066797|Gm10178|Gm203	zinc finger protein 648	protein-coding
common_peak1-8503-15-31--0.987835249444344-1.35897270024963	chr10	81996799	81997492	+	0	NA	Intergenic	L1Md_A|LINE|L1	-41782	NM_001255990	432480	Mm.280394	NM_001255990	ENSMUSG00000094186	Gm1553	Lcrn	predicted gene 1553	protein-coding
common_peak2-22399-10-8-0.186490343566457-1.078512453669	chr13	33028239	33028622	+	0	NA	Intergenic	Intergenic	-28952	NM_011454	20708	Mm.36526	NM_011454	ENSMUSG00000042842	Serpinb6b	NK13|Spi12|ovalbumin	serine (or cysteine) peptidase inhibitor, clade B, member 6b	protein-coding
unique_peak1-6450-8-1-2.00522241794757-2.05605744720049	chr7	99518413	99518790	+	0	NA	intron (NM_001243046, intron 5 of 14)	MLT1D|LTR|MaLR	135121	NM_001243047	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
common_peak2-30131-19-18-0.154759813218101-0.351190433797598	chr6	137754401	137755139	+	0	NA	intron (NM_172733, intron 6 of 8)	intron (NM_172733, intron 6 of 8)	51672	NM_172733	232449	Mm.29181	NM_172733	ENSMUSG00000030225	Dera	2010002D22Rik|2500002K03Rik|DEOC	2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	protein-coding
common_peak2-20344-21-25--0.130950452874856-0.305461879681376	chr10	7662912	7663967	+	0	NA	intron (NM_138667, intron 1 of 6)	intron (NM_138667, intron 1 of 6)	12482	NM_138667	68652	Mm.193041	NM_138667	ENSMUSG00000015755	Tab2	1110030N06Rik|A530078N03Rik|Map3k7ip2|mKIAA0733	TGF-beta activated kinase 1/MAP3K7 binding protein 2	protein-coding
common_peak2-19921-8-6-0.197867495889966-1.03789460276074	chr1	125686295	125686712	+	0	NA	intron (NM_199021, intron 3 of 25)	intron (NM_199021, intron 3 of 25)	255633	NM_199021	269109	Mm.483255	NM_199021	ENSMUSG00000036815	Dpp10	6430601K09Rik|DPP X|Dprp3	dipeptidylpeptidase 10	protein-coding
common_peak1-10552-27-31--0.00845404910476422-0.304476922018591	chr14	20347779	20348741	+	0	NA	Intergenic	ORR1B1|LTR|MaLR	73549	NM_001024706	432825	Mm.327147	NM_001024706	ENSMUSG00000095024	Gm5458	EG432825	predicted gene 5458	protein-coding
common_peak1-10896-37-55--0.281361850571785-0.475408985215012	chr15	98533337	98534612	+	0	NA	Intergenic	(GAGAA)n|Simple_repeat|Simple_repeat	-4684	NM_153518	105833	Mm.26205	NM_153518	ENSMUSG00000003354	Ccdc65	4933417K04Rik|AI428139|AU020178|NYD-SP28	coiled-coil domain containing 65	protein-coding
unique_peak1-296-12-3-1.64877598508764-2.36932189928148	chr1	125480912	125481553	+	0	NA	intron (NM_199021, intron 5 of 25)	MTE2b|LTR|MaLR	460904	NM_199021	269109	Mm.483255	NM_199021	ENSMUSG00000036815	Dpp10	6430601K09Rik|DPP X|Dprp3	dipeptidylpeptidase 10	protein-coding
common_peak2-22675-8-10--0.454209200689727-1.078512453669	chr13	97511201	97511714	+	0	NA	Intergenic	MLT1C|LTR|MaLR	-70566	NM_008255	15357	Mm.316652	NM_008255	ENSMUSG00000021670	Hmgcr	HMG-CoAR|Red	3-hydroxy-3-methylglutaryl-Coenzyme A reductase	protein-coding
unique_peak2-37488-3-8--1.58390809140159-1.39487600375387	chr5	5342668	5343067	+	0	NA	intron (NM_011074, intron 2 of 14)	intron (NM_011074, intron 2 of 14)	37384	NM_011074	18647	Mm.389061	NM_011074	ENSMUSG00000028926	Cdk14	Pftk1|mKIAA0834	cyclin-dependent kinase 14	protein-coding
unique_peak2-37023-5-10--1.16381195464315-1.33892459842472	chr3	126701443	126701875	+	0	NA	promoter-TSS (NM_178655)	promoter-TSS (NM_178655)	-289	NM_178655	109676	Mm.220242	NM_178655	ENSMUSG00000032826	Ank2	AI835472|AW491075|Ank-2	ankyrin 2, brain	protein-coding
unique_peak2-38622-7-6--0.00826409175941478-0.97990265578305	chr7	80781571	80781961	+	0	NA	Intergenic	ORR1A2|LTR|MaLR	49683	NR_033604	244061	Mm.484605	NR_033604		Gm4971	EG244061	Smad nuclear interacting protein 1 pseudogene	pseudo
unique_peak2-37457-3-6--1.22133801201688-1.08602067057793	chr5	31637288	31637721	+	0	NA	intron (NR_105788, intron 7 of 7)	RodERV21-int|LTR|ERV1	37550	NM_144909	231103	Mm.100043	NM_144909	ENSMUSG00000059434	Gckr	GKRP	glucokinase regulatory protein	protein-coding
unique_peak2-38597-9-10--0.269818212233077-1.05503135781948	chr7	78925737	78926162	+	0	NA	Intergenic	Intergenic	525532	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding
common_peak2-30267-37-63--0.474006928514181-0.879126120438037	chr7	16098434	16099318	+	0	NA	Intergenic	Lx3A|LINE|L1	-33730	NM_027802	71468	Mm.415195	NM_027802	ENSMUSG00000054310	Obox1	7420700M11Rik|AU015708|AU024152	oocyte specific homeobox 1	protein-coding
unique_peak1-3674-10-1-2.35641534500877-2.57096726280955	chr19	41795863	41796566	+	0	NA	intron (NM_015748, intron 3 of 36)	B1F|SINE|Alu	22132	NM_015748	20562	Mm.40322	NM_015748	ENSMUSG00000025020	Slit1	Slil1|mKIAA0813	slit homolog 1 (Drosophila)	protein-coding
common_peak1-9273-106-171--0.088497899696379-0.353856027129641	chr11	87470579	87471753	+	0	NA	3' UTR (NM_001045527, exon 6 of 6)	3' UTR (NM_001045527, exon 6 of 6)	-5423	NM_172448	207742	Mm.440230	NM_172448	ENSMUSG00000034177	Rnf43	4732452J19Rik	ring finger protein 43	protein-coding
unique_peak2-38617-3-7--1.41398308995928-1.23214870625617	chr7	80340390	80340641	+	0	NA	Intergenic	Intergenic	-93561	NR_046024	625243	Mm.261798	NR_046024		Gm6567	-	predicted gene 6567	ncRNA
unique_peak2-34517-7-8--0.370834171144123-1.00793137938329	chr14	52257227	52257718	+	0	NA	intron (NM_001013816, intron 1 of 4)	(TG)n|Simple_repeat|Simple_repeat	79335	NM_001034102	545047	Mm.425915	NM_001034102	ENSMUSG00000068506	Gm5800	EG545047	predicted gene 5800	protein-coding
common_peak2-25215-48-66--0.0951620392229575-0.316181169053401	chr18	61176333	61177437	+	0	NA	Intergenic	Intergenic	-3032	NM_201353	240332	Mm.39846	NM_201353	ENSMUSG00000052026	Slc6a7	AW455934|PROT	solute carrier family 6 (neurotransmitter transporter, L-proline), member 7	protein-coding
common_peak2-20025-7-4-0.477162735410827-1.09384600808989	chr1	136134293	136134622	+	0	NA	Intergenic	Intergenic	-2423	NM_001008533	11539	Mm.298908	NM_009629	ENSMUSG00000042429	Adora1	A1-AR|A1AR|A1R|AA1R|AI848715|BB176431|Ri	adenosine A1 receptor	protein-coding
unique_peak2-39643-5-10--1.16381195464315-1.33892459842472	chr9	104002712	104003100	+	0	NA	intron (NM_145700, intron 2 of 2)	intron (NM_145700, intron 2 of 2)	26067	NM_145700	252837	Mm.269254	NM_145700	ENSMUSG00000079355	Ackr4	A630091E18Rik|CCBP2|CCR11|CCX-CKR|CCX-CKR1|Ccrl1|Cmkbrl1|PPR1|VSHK1	atypical chemokine receptor 4	protein-coding
common_peak1-11282-14-10-0.439784541720347-0.519648556297791	chr15	83100213	83100873	+	0	NA	Intergenic	MMVL30-int|LTR|ERV1	-18339	NM_001004150	239559	Mm.323805	NM_001004150	ENSMUSG00000047878	A4galt	-	alpha 1,4-galactosyltransferase	protein-coding
common_peak1-19307-19-13-0.595332404604082-0.713635438203849	chr9	122104220	122104923	+	0	NA	intron (NM_001271873, intron 12 of 12)	MER58A|DNA|MER1_type	78187	NM_133741	20623	Mm.257989	NM_133741	ENSMUSG00000038145	Snrk	2010012F07Rik|AI448042|AW547029|E030034B15|R74830|mKIAA0096	SNF related kinase	protein-coding
common_peak1-14914-14-13-0.0918612383000403-0.332077462497413	chr3	98025618	98026370	+	0	NA	promoter-TSS (NM_026328)	promoter-TSS (NM_026328)	-85	NM_026328	67709	Mm.46306	NM_026328	ENSMUSG00000027876	Reg4	2010002L15Rik|GISP|RELP	regenerating islet-derived family, member 4	protein-coding
common_peak2-25070-24-15-0.793209902767717-1.16796998271032	chr18	34958444	34959004	+	0	NA	intron (NM_001081256, intron 5 of 23)	intron (NM_001081256, intron 5 of 23)	22062	NM_001081256	277250	Mm.277906	NM_029518	ENSMUSG00000038773	Kdm3b	5830462I21Rik|JHDM2B|Jmjd1b|mKIAA1082	KDM3B lysine (K)-specific demethylase 3B	protein-coding
common_peak1-13724-13-12-0.0780323124966764-0.334470287753051	chr2	31152096	31152730	+	0	NA	Intergenic	Intergenic	50970	NM_019681	14299	Mm.249318	NM_019681	ENSMUSG00000062661	Ncs1	9430075O15Rik|A730032G13Rik|AI836659|Freq|Mfreq|NCS-1	neuronal calcium sensor 1	protein-coding
common_peak1-19187-33-35-0.161412561083217-0.373466121463208	chr9	99436526	99437606	+	0	NA	intron (NM_028768, intron 3 of 21)	Lx9|LINE|L1	32252	NM_001166138	74125	Mm.234823	NM_028768	ENSMUSG00000032468	Armc8	1200015K23Rik|Gid5|HSPC056	armadillo repeat containing 8	protein-coding
unique_peak2-38781-4-6--0.830815435910851-0.989110657569874	chr7	127904131	127904561	+	0	NA	intron (NM_177697, intron 5 of 33)	intron (NM_177697, intron 5 of 33)	21275	NM_177697	233813	Mm.389939	NM_177697	ENSMUSG00000030889	Vwa3a	E030013G06Rik	von Willebrand factor A domain containing 3A	protein-coding
common_peak1-10800-41-21-1.24171708621136-3.2524299487632	chr14	76819240	76820806	+	0	NA	intron (NM_207652, intron 1 of 2)	intron (NM_207652, intron 1 of 2)	4395	NM_207652	21807	Mm.153272	NM_009366	ENSMUSG00000022010	Tsc22d1	AA589566|AW105905|Egr5|TSC-22|Tgfb1i4|Tsc|Tsc22	TSC22 domain family, member 1	protein-coding
common_peak1-12411-60-66-0.288202671162759-0.677371116707613	chr17	72958566	72960909	+	0	NA	Intergenic	L4|LINE|RTE	-6090	NM_007439	11682	Mm.311854	NM_007439	ENSMUSG00000055471	Alk	CD246|Tcrz	anaplastic lymphoma kinase	protein-coding
common_peak1-18786-11-13--0.298661337805991-0.337263207250336	chr9	111148664	111149244	+	0	NA	intron (NM_026810, intron 11 of 18)	L1MC4|LINE|L1	25158	NM_026810	17350	Mm.486383	NM_026810	ENSMUSG00000032498	Mlh1	1110035C23Rik|AI317206|AI325952|AI561766	mutL homolog 1 (E. coli)	protein-coding
unique_peak1-90-18-0-4.31291915122835-NA	chr1	43530812	43531483	+	0	NA	intron (NM_010879, intron 1 of 4)	intron (NM_010879, intron 1 of 4)	28551	NM_010879	17974	Mm.389903	NM_010879	ENSMUSG00000066877	Nck2	4833426I10Rik|Grb4|NCKbeta|Nck-2	non-catalytic region of tyrosine kinase adaptor protein 2	protein-coding
common_peak2-27300-24-45--0.730352053289296-1.16863888781394	chr3	60502646	60504186	+	0	NA	Intergenic	Intergenic	198242	NM_001253708	56758	Mm.255723	NM_020007	ENSMUSG00000027763	Mbnl1	Mbnl|mKIAA0428	muscleblind-like 1 (Drosophila)	protein-coding
common_peak1-16483-21-9-1.24756117037887-1.83731222263754	chr5	137746643	137747583	+	0	NA	intron (NM_001109910, intron 2 of 19)	B3A|SINE|B2	1789	NM_031405	83701	Mm.387734	NM_031405	ENSMUSG00000037364	Srrt	2810019G02Rik|ASR2A|ASR2B|ASR2C|ASR2D|Ars2|Asr2	serrate RNA effector molecule homolog (Arabidopsis)	protein-coding
common_peak1-15174-143-303--0.390409414466148-2.35313322542378	chr3	152209318	152211985	+	0	NA	intron (NM_001081277, intron 6 of 13)	intron (NM_001081277, intron 6 of 13)	-119226	NR_040386	99542	Mm.394921	NR_040386	ENSMUSG00000097745	AI115009	-	expressed sequence AI115009	ncRNA
common_peak1-17182-52-43-0.648828371628402-1.62370182176242	chr6	122819309	122820645	+	0	NA	Intergenic	Intergenic	-4598	NM_026267	67602	Mm.288114	NM_026267	ENSMUSG00000030327	Necap1	1200016B17Rik|AI747569|mFLJ00061	NECAP endocytosis associated 1	protein-coding
common_peak1-15862-19-35--0.767237674780626-1.06916698217164	chr5	4192240	4192997	+	0	NA	intron (NM_001042670, intron 1 of 1)	intron (NM_001042670, intron 1 of 1)	251	NM_001042670	208595	Mm.129815	NM_001042670	ENSMUSG00000053178	Mterf1b	ENSMUSG00000053178|Gm9897	mitochondrial transcription termination factor 1b	protein-coding
common_peak1-15872-25-59--1.04504069026341-2.56700509083571	chr5	5513963	5515014	+	0	NA	intron (NM_001193660, intron 1 of 4)	CpG	301	NM_001193660	64945	Mm.40132	NM_022890	ENSMUSG00000046798	Cldn12	-	claudin 12	protein-coding
common_peak2-26229-65-45-0.968603983420114-3.6214096329053	chr2	27539785	27540430	+	0	NA	intron (NM_011305, intron 1 of 9)	intron (NM_011305, intron 1 of 9)	7386	NM_011305	20181	Mm.24624	NM_011305	ENSMUSG00000015846	Rxra	9530071D11Rik|Nr2b1|RXRalpha1	retinoid X receptor alpha	protein-coding
unique_peak1-2674-19-5-1.81772482594053-2.59995804677862	chr16	57642559	57643552	+	0	NA	intron (NM_007739, intron 2 of 3)	intron (NM_007739, intron 2 of 3)	-36075	NM_025599	66497	Mm.425976	NM_025599		Cmss1	1110001A06Rik|2610528E23Rik|4930572F24Rik|AV099812|AV122629	cms small ribosomal subunit 1	protein-coding
common_peak2-19704-135-188-0.195242978819389-0.722762649400777	chr1	64119969	64122729	+	0	NA	intron (NM_033563, intron 2 of 3)	intron (NM_033563, intron 2 of 3)	-32274	NR_105864	102466760		NR_105864		Mir6899	mmu-mir-6899	microRNA mir-6899	ncRNA
common_peak2-23195-107-134-0.277231335622565-0.957956069512942	chr15	83148433	83149851	+	0	NA	intron (NM_025445, intron 9 of 15)	intron (NM_025445, intron 9 of 15)	31535	NM_025445	66251	Mm.258910	NM_025445	ENSMUSG00000054277	Arfgap3	0610009H19Rik|1810004P07Rik|1810035F16Rik|9130416J18Rik|Arfgap1	ADP-ribosylation factor GTPase activating protein 3	protein-coding
unique_peak1-2953-7-1-1.79909083029819-1.80617997398389	chr17	70730029	70730469	+	0	NA	Intergenic	Intergenic	-43883	NM_177639	224997	Mm.311840	NM_027712	ENSMUSG00000003279	Dlgap1	4933422O14Rik|9630002F18|AI845682|AI848168|BB075781|D17Bwg0511e|GKAP/SAPAP|GKPA/SAPAP|Gkap|Sapap1|mKIAA4162	discs, large (Drosophila) homolog-associated protein 1	protein-coding
common_peak2-22001-37-62--0.451286852014098-0.817648941027521	chr12	55154776	55155870	+	0	NA	intron (NM_013780, intron 9 of 11)	intron (NM_013780, intron 9 of 11)	149538	NM_028133	112407	Mm.133037	NM_028133	ENSMUSG00000035105	Egln3	2610021G09Rik|AI505553|AI648162|Hif-p4h-3|Phd3|SM-20	egl-9 family hypoxia-inducible factor 3	protein-coding
common_peak2-22324-38-46-0.0168638076208927-0.31027100108714	chr13	23530262	23531690	+	0	NA	Intergenic	Intergenic	-8090	NR_015492	320842	Mm.487476	NR_015492	ENSMUSG00000085024	C230035I16Rik	-	RIKEN cDNA C230035I16 gene	ncRNA
unique_peak2-39699-1-5--2.2120195109379-1.32905871926422	chr9	111162829	111163221	+	0	NA	intron (NM_026810, intron 4 of 18)	intron (NM_026810, intron 4 of 18)	11087	NM_026810	17350	Mm.486383	NM_026810	ENSMUSG00000032498	Mlh1	1110035C23Rik|AI317206|AI325952|AI561766	mutL homolog 1 (E. coli)	protein-coding
unique_peak2-38533-6-15--1.4346018896197-1.16633110333236	chr7	46710176	46710707	+	0	NA	intron (NM_001243021, intron 1 of 5)	intron (NM_001243021, intron 1 of 5)	5553	NM_001243021	233147	Mm.148946	NM_001243021	ENSMUSG00000030424	Zfp939	9430025M13Rik	zinc finger protein 939	protein-coding
common_peak2-31558-14-8-0.729291158915332-0.771068449301682	chr8	116943395	116943903	+	0	NA	intron (NM_001007223, intron 1 of 2)	intron (NM_001007223, intron 1 of 2)	1715	NM_001007223	403395	Mm.81117	NM_001007223		Clec3a	1110019O10Rik|Clecsf1|Gm796	C-type lectin domain family 3, member a	protein-coding
common_peak2-25083-78-89-0.31496799783086-0.873780713063518	chr18	35771345	35772532	+	0	NA	intron (NM_026420, intron 2 of 3)	intron (NM_026420, intron 2 of 3)	13617	NM_026420	67869	Mm.126534	NM_026420	ENSMUSG00000037058	Paip2	2310050K10Rik|AU045972	polyadenylate-binding protein-interacting protein 2	protein-coding
common_peak1-11239-82-180--0.606582742777471-3.02245271449611	chr15	79741115	79743076	+	0	NA	Intergenic	Intergenic	-18527	NR_030675	109361	Mm.394656	NR_030675		D730005E14Rik	-	RIKEN cDNA D730005E14 gene	ncRNA
common_peak2-26052-15-20--0.380152672223105-0.397739447719386	chr2	28523900	28525044	+	0	NA	intron (NM_001289575, intron 8 of 22)	RSINE1|SINE|B4	27719	NM_022887	64930	Mm.224354	NM_022887	ENSMUSG00000026812	Tsc1	-	tuberous sclerosis 1	protein-coding
unique_peak1-6071-8-1-2.00522241794757-2.05605744720049	chr6	119339202	119339734	+	0	NA	intron (NM_197985, intron 1 of 7)	intron (NM_197985, intron 1 of 7)	28033	NM_197985	68465	Mm.291826	NM_197985	ENSMUSG00000030168	Adipor2	1110001I14Rik|ADCR2|AI115388|AW554121|D6Ucla1e|Paqr2	adiponectin receptor 2	protein-coding
unique_peak1-4252-10-3-1.35641534500877-1.75805390616669	chr2	128420791	128421319	+	0	NA	Intergenic	Intergenic	92076	NM_008569	17222	Mm.277408	NM_008569	ENSMUSG00000014355	Anapc1	2610021O03Rik|AI047775|AI853536|AW547281|Apc1|Mcpr|tsg24	anaphase promoting complex subunit 1	protein-coding
unique_peak1-4148-9-0-3.18961340640422-3.01029995663981	chr2	94399509	94400022	+	0	NA	Intergenic	L1Md_A|LINE|L1	-121461	NM_007466	11800	Mm.181824	NM_007466	ENSMUSG00000027193	Api5	AAC-11|AI196452	apoptosis inhibitor 5	protein-coding
unique_peak2-39633-2-11--2.50241675698448-2.32232533660526	chr9	99720408	99720910	+	0	NA	Intergenic	Intergenic	55930	NM_011440	20669	Mm.261595	NM_011440	ENSMUSG00000053747	Sox14	-	SRY (sex determining region Y)-box 14	protein-coding
common_peak2-25236-8-6-0.197867495889966-1.03789460276074	chr18	64340992	64341405	+	0	NA	intron (NR_045366, intron 2 of 5)	(TG)n|Simple_repeat|Simple_repeat	-72815	NM_009182	20451	Mm.252110	NM_009182	ENSMUSG00000056812	St8sia3	AI847333|ST8SiaIII|Siat8c	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	protein-coding
common_peak2-24077-15-17--0.157760250886656-0.307611222530528	chr16	31172516	31173399	+	0	NA	intron (NM_030138, intron 1 of 22)	L1MC1|LINE|L1	28367	NM_030138	78618	Mm.274646	NM_030138	ENSMUSG00000049076	Acap2	4832442G16|9530039J15Rik|CNT-B2|Centb2|mKIAA0041	ArfGAP with coiled-coil, ankyrin repeat and PH domains 2	protein-coding
common_peak2-21443-13-7-0.778472030637769-0.817533494790411	chr11	86614288	86614849	+	0	NA	exon (NM_026191, exon 4 of 18)	exon (NM_026191, exon 4 of 18)	6594	NM_026191	67487	Mm.260627	NM_026191	ENSMUSG00000018425	Dhx40	2410016C14Rik|ARG147|DDX40|PAD	DEAH (Asp-Glu-Ala-His) box polypeptide 40	protein-coding
common_peak1-12546-13-22--0.745089925419244-0.690311289528838	chr18	6135354	6136072	+	0	NA	intron (NM_001039692, intron 1 of 18)	CpG	383	NM_029277	75415	Mm.239675	NM_029277	ENSMUSG00000041225	Arhgap12	2810011M08Rik	Rho GTPase activating protein 12	protein-coding
common_peak1-18529-11-13--0.298661337805991-0.337263207250336	chr8	94214644	94215148	+	0	NA	Intergenic	ORR1E|LTR|MaLR	110657	NM_001253822	16373	Mm.238044	NM_008393	ENSMUSG00000031734	Irx3	AI894186	Iroquois related homeobox 3	protein-coding
common_peak2-29460-31-56--0.607651343351618-1.1498986797243	chr6	29316458	29318442	+	0	NA	intron (NM_007594, intron 5 of 6)	B3A|SINE|B2	13063	NM_007538	12057	Mm.56987	NM_007538	ENSMUSG00000058831	Opn1sw	AW551857|Bcp	opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan)	protein-coding
common_peak1-14090-10-6-0.549060422951165-1.21398586181642	chr2	122631175	122631754	+	0	NA	intron (NR_027888, intron 7 of 9)	intron (NR_027888, intron 7 of 9)	23729	NM_021507	59010	Mm.28986	NM_021507	ENSMUSG00000005803	Sqrdl	0610039J17Rik|4930557M22Rik	sulfide quinone reductase-like (yeast)	protein-coding
common_peak2-31762-55-40-0.847067866534618-2.53684336221073	chr9	21238278	21239496	+	0	NA	intron (NM_001253893, intron 1 of 20)	B2_Mm1a|SINE|B2	9535	NM_001039520	13430	Mm.433257	NM_007871	ENSMUSG00000033335	Dnm2	Dyn2|Udnm|b2b2159Clo	dynamin 2	protein-coding
common_peak2-28259-8-6-0.197867495889966-1.03789460276074	chr4	126227211	126227624	+	0	NA	Intergenic	LTR82B|Low_complexity|ERVL	-6807	NM_175554	269582	Mm.243962	NM_175554	ENSMUSG00000042489	Clspn	B130025E01|C85083|E130314M08Rik	claspin	protein-coding
unique_peak1-5553-10-1-2.35641534500877-2.57096726280955	chr5	144317226	144317819	+	0	NA	intron (NM_026050, intron 2 of 2)	intron (NM_026050, intron 2 of 2)	7948	NM_026050	67238	Mm.383219	NM_026050	ENSMUSG00000048910	Fam220a	1500026F15Rik|2810453I06Rik|AW047776|Acpin1|Sipar	family with sequence similarity 220, member A	protein-coding
unique_peak2-38276-7-7--0.200909169701811-0.97990265578305	chr6	130064942	130065446	+	0	NA	TTS (NM_001101620)	TTS (NM_001101620)	14659	NM_010650	16639	Mm.439698	NM_010650	ENSMUSG00000089727	Klra8	Cmv-1|Cmv1|Ly49h|Ly49u<129>	killer cell lectin-like receptor, subfamily A, member 8	protein-coding
unique_peak2-37377-5-11--1.28934283672701-1.477227296591	chr4	138344575	138345058	+	0	NA	Intergenic	Intergenic	13166	NM_011109	18782	Mm.71913	NM_011109	ENSMUSG00000041202	Pla2g2d	Splash|mGIID	phospholipase A2, group IID	protein-coding
unique_peak2-35923-3-5--0.998945590680433-0.96108193396963	chr19	6077382	6077799	+	0	NA	promoter-TSS (NM_001081041)	promoter-TSS (NM_001081041)	-403	NM_001081041	68505	Mm.227361	NM_001081041	ENSMUSG00000024797	Vps51	1110014N23Rik|3110057M17Rik|AI837850|Ffr	vacuolar protein sorting 51 homolog (S. cerevisiae)	protein-coding
common_peak1-14368-20-28--0.369906210536379-0.457753417732779	chr2	167631269	167632020	+	0	NA	Intergenic	Intergenic	114967	NR_015500	329562	Mm.123101	NM_177851	ENSMUSG00000006462	A530013C23Rik	-	RIKEN cDNA A530013C23 gene	ncRNA
common_peak1-14886-9-5-0.604650905683064-1.21398586181642	chr3	96094209	96094727	+	0	NA	intron (NM_010186, intron 3 of 5)	intron (NM_010186, intron 3 of 5)	3424	NM_010186	14129	Mm.150	NM_010186	ENSMUSG00000015947	Fcgr1	AI323638|AV092959|CD64|FcgammaRI|IGGHAFC	Fc receptor, IgG, high affinity I	protein-coding
common_peak1-16648-41-15-1.70114870484866-4.99657067904014	chr6	91192332	91193723	+	0	NA	intron (NM_001081437, intron 2 of 16)	(TC)n|Simple_repeat|Simple_repeat	30269	NM_007992	14115	Mm.249146	NM_007992	ENSMUSG00000064080	Fbln2	5730577E14Rik|FIBL-2	fibulin 2	protein-coding
common_peak1-8067-19-23--0.18227517405947-0.320777457303847	chr1	176818327	176819191	+	0	NA	intron (NM_011825, intron 1 of 1)	intron (NM_011825, intron 1 of 1)	33191	NM_011825	23893	Mm.25760	NM_011825	ENSMUSG00000050069	Grem2	Gremlin2|Prdc	gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis)	protein-coding
unique_peak1-1497-14-2-2.31425365963649-3.28500101358144	chr13	109821438	109822060	+	0	NA	intron (NM_011056, intron 2 of 16)	intron (NM_011056, intron 2 of 16)	-293189	NR_030644	100124489		NR_030644		Mir582	Mirn582|mmu-mir-582	microRNA 582	ncRNA
common_peak2-24116-63-70-0.288565471565907-0.701531665477134	chr16	33184729	33185846	+	0	NA	5' UTR (NM_176840, exon 1 of 13)	5' UTR (NM_176840, exon 1 of 13)	130	NM_176840	106326	Mm.486405	NM_176840	ENSMUSG00000022807	Osbpl11	9430097N02Rik|AI132306|AU019795|ORP-11	oxysterol binding protein-like 11	protein-coding
common_peak1-7849-13-10-0.319040412000471-0.446472590016315	chr1	132139238	132139934	+	0	NA	Intergenic	polypurine|Low_complexity|Low_complexity	179990	NM_007827	13137	Mm.436759	NM_007827	ENSMUSG00000026401	Daf2	AI323748|Cd55b|Daf|Daf-TM|TM-DAF	decay accelerating factor 2	protein-coding
unique_peak1-1802-9-2-1.60465090568306-1.87199725847353	chr14	25447050	25447713	+	0	NA	Intergenic	Intergenic	137478	NM_011297	20088	Mm.16775	NM_011297	ENSMUSG00000025290	Rps24	-	ribosomal protein S24	protein-coding
common_peak1-18159-21-35--0.600435736176077-0.748982406290541	chr8	13105515	13106376	+	0	NA	promoter-TSS (NM_178708)	promoter-TSS (NM_178708)	224	NM_146207	99375	Mm.212861	NM_146207	ENSMUSG00000031446	Cul4a	2810470J21Rik|AW495282	cullin 4A	protein-coding
common_peak1-15936-13-14--0.12841856497075-0.301029995663977	chr5	28037313	28037885	+	0	NA	intron (NM_001136060, intron 18 of 25)	intron (NM_001136060, intron 18 of 25)	80491	NM_018878	55982	Mm.277190	NM_018878	ENSMUSG00000002221	Paxip1	D5Ertd149e|PTIP	PAX interacting (with transcription-activation domain) protein 1	protein-coding
unique_peak1-6292-15-8-0.842239749113344-0.891319708951327	chr7	29458968	29459661	+	0	NA	Intergenic	Intergenic	-18554	NM_207238	233040	Mm.116116	NM_207238	ENSMUSG00000037463	Fbxo27	E130008B10Rik|FBG5|Gm161	F-box protein 27	protein-coding
unique_peak2-33039-2-9--2.23938235115068-1.87199725847353	chr10	71339263	71339707	+	0	NA	Intergenic	Intergenic	103953	NR_003644	108950	Mm.212793	NM_175390	ENSMUSG00000043859	1700049L16Rik	-	hematological and neurological expressed 1-like pseudogene	pseudo
common_peak1-16680-57-66-0.199943849621157-0.484951602153905	chr6	8208907	8210335	+	0	NA	promoter-TSS (NM_026632)	promoter-TSS (NM_026632)	333	NR_033518	100036521	Mm.446106	NR_033518	ENSMUSG00000089862	Gm16039	OTTMUSG00000029336	predicted gene 16039	ncRNA
common_peak2-21249-61-32-1.33835521039089-5.38750882980762	chr11	69073000	69073488	+	0	NA	Intergenic	Intergenic	-22720	NM_008192	14919	Mm.291816	NM_008192	ENSMUSG00000020890	Gucy2e	GC-E|GC1|ROS-GC1	guanylate cyclase 2e	protein-coding
unique_peak2-37418-3-5--0.998945590680433-0.96108193396963	chr4	149049240	149049565	+	0	NA	intron (NM_001029837, intron 1 of 23)	intron (NM_001029837, intron 1 of 23)	796	NM_001164051	18707	Mm.229108	NM_008840	ENSMUSG00000039936	Pik3cd	2410099E07Rik|2610208K16Rik|AW545373|p110delta	phosphatidylinositol 3-kinase catalytic delta polypeptide	protein-coding
unique_peak2-32709-4-6--0.830815435910851-0.989110657569874	chr1	153270084	153270499	+	0	NA	intron (NM_025819, intron 2 of 19)	B1F|SINE|Alu	5274	NM_025819	66875	Mm.290905	NM_025819	ENSMUSG00000052748	Swt1	1200016B10Rik|C1orf26	SWT1 RNA endoribonuclease homolog (S. cerevisiae)	protein-coding
common_peak2-22766-59-86--0.11757949497615-0.348132427537962	chr13	119790245	119791642	+	0	NA	Intergenic	L1Md_F2|LINE|L1	287437	NM_008002	14165	Mm.317323	NM_008002	ENSMUSG00000021732	Fgf10	AEY17|BB213776|Fgf-10|Gsfaey17	fibroblast growth factor 10	protein-coding
common_peak1-15634-32-20-0.886774596440899-1.65365064026544	chr4	133887735	133888899	+	0	NA	Intergenic	ORR1A3|LTR|MaLR	-10644	NM_001039677	230810	Mm.358876	NM_001039677	ENSMUSG00000028836	Slc30a2	6030430C21|ZnT-2|Znt2	solute carrier family 30 (zinc transporter), member 2	protein-coding
unique_peak1-2551-7-0-2.79909083029819-2.40823996531185	chr16	23522640	23523079	+	0	NA	Intergenic	Intergenic	-2196	NM_008555	17174	Mm.1213	NM_008555	ENSMUSG00000022887	Masp1	AW048060|CCPII|Crarf|Masp1/3	mannan-binding lectin serine peptidase 1	protein-coding
common_peak2-20369-25-28-0.00386891021753399-0.304839791830758	chr10	13552656	13553799	+	0	NA	intron (NM_025446, intron 1 of 5)	URR1B|DNA|MER1_type	35409	NM_025446	66253	Mm.45755	NM_025446	ENSMUSG00000019806	Aig1	1500031O19Rik|AV064870|AW413422|CGI-103	androgen-induced 1	protein-coding
common_peak1-18814-104-129-0.282377388183703-0.938426755972622	chr9	110688544	110690798	+	0	NA	Intergenic	Intergenic	-11018	NM_153099	235628	Mm.292285	NM_153099	ENSMUSG00000044664	Prss42	Tessp2	protease, serine 42	protein-coding
common_peak2-28118-8-9--0.316705676939792-1.03275496310833	chr4	89054255	89054767	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-97570	NM_007670	12579	Mm.423094	NM_007670	ENSMUSG00000073802	Cdkn2b	AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b	cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)	protein-coding
unique_peak1-5087-10-0-3.35641534500877-3.31132995230379	chr4	145025494	145025993	+	0	NA	Intergenic	L1_Mur2|LINE|L1	-28370	NR_002888	545700	Mm.389595	NR_002888	ENSMUSG00000052912	Smarca5-ps	9230115A19Rik|OTTMUSG00000011029	SWI/SNF related, matrix associated, actin depenent ragulator of chromatin, subfamily a, member 5, pseudogene	pseudo
common_peak2-30967-37-57--0.331987923641753-0.556612435105728	chr8	120536903	120539017	+	0	NA	Intergenic	RLTRETN_Mm|LTR|ERVK	-212131	NM_026758	68533	Mm.181836	NM_026758	ENSMUSG00000031843	Mphosph6	1110001M01Rik|AA536809|C86426	M phase phosphoprotein 6	protein-coding
common_peak2-29419-28-55--0.754395802236141-1.50810240303318	chr6	5297706	5298712	+	0	NA	Intergenic	Lx7|LINE|L1	-35177	NM_023048	65255	Mm.51340	NM_023048	ENSMUSG00000042607	Asb4	8430401O13Rik|AV117194|AW060255	ankyrin repeat and SOCS box-containing 4	protein-coding
common_peak2-20112-14-47--1.68574634036351-4.06657318675301	chr1	161875487	161876760	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-98388	NR_028111	67647	Mm.171518	NM_001024470	ENSMUSG00000090394	4930523C07Rik	-	RIKEN cDNA 4930523C07 gene	protein-coding
common_peak1-8338-8-8--0.164702583494742-1.00793137938329	chr10	44267477	44267882	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-89186	NM_007548	12142	Mm.4800	NM_007548	ENSMUSG00000038151	Prdm1	Blimp-1|Blimp1|PRDI-BF1|ZNFPR1A1|b2b1765Clo	PR domain containing 1, with ZNF domain	protein-coding
common_peak1-9708-10-7-0.356415345008769-1.12966497611638	chr12	28675847	28676318	+	0	NA	Intergenic	L1_Mur3|LINE|L1	557120	NM_001177964	68511	Mm.310284	NM_001177964		Dcdc2c	1110015M06Rik	doublecortin domain containing 2C	protein-coding
unique_peak2-36467-0-6--3.64748585253182-1.56314192529759	chr2	144274775	144275168	+	0	NA	Intergenic	Intergenic	-10045	NR_033459	668917	Mm.152805	NR_033459	ENSMUSG00000083674	Zfp133-ps	OTTMUSG00000003825|Zfp133	zinc finger protein 133, pseudogene	pseudo
common_peak1-13486-31-28-0.367257675685551-0.572500200098098	chr2	26639579	26641037	+	0	NA	Intergenic	Intergenic	80207	NM_030718	80908	Mm.160386	NM_030718	ENSMUSG00000015787	Abo	NAGAT	ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase, transferase B, alpha 1-3-galactosyltransferase)	protein-coding
common_peak2-32141-13-41--1.61384539214099-3.30766246000401	chr9	107612136	107612835	+	0	NA	intron (NM_011349, intron 1 of 17)	intron (NM_011349, intron 1 of 17)	321	NM_011349	20350	Mm.12903	NM_011349	ENSMUSG00000034684	Sema3f	Sema4|Semak	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F	protein-coding
common_peak2-23254-20-28--0.369906210536379-0.457753417732779	chr15	12307288	12307804	+	0	NA	intron (NM_001081064, intron 18 of 23)	intron (NM_001081064, intron 18 of 23)	56295	NM_025673	66629	Mm.157655	NM_025673	ENSMUSG00000022200	Golph3	4733401N08Rik|5730410D03Rik|AW413496	golgi phosphoprotein 3	protein-coding
common_peak2-22251-11-42--1.91757117045048-4.50078841046546	chr13	119488042	119489182	+	0	NA	Intergenic	L1M5|LINE|L1	-14894	NM_008002	14165	Mm.317323	NM_008002	ENSMUSG00000021732	Fgf10	AEY17|BB213776|Fgf-10|Gsfaey17	fibroblast growth factor 10	protein-coding
common_peak2-23439-36-29-0.572430490559236-1.05820747366651	chr15	62328897	62329740	+	0	NA	Intergenic	(GGAA)n|Simple_repeat|Simple_repeat	-278312	NR_003523	67552	Mm.484027	NM_026230		H2afy3	4933432H23Rik	H2A histone family, member Y3	pseudo
unique_peak1-527-19-5-1.81772482594053-2.59995804677862	chr1	184863826	184864643	+	0	NA	Intergenic	Lx|LINE|L1	-20685	NM_016928	53791	Mm.116894	NM_016928	ENSMUSG00000079164	Tlr5	-	toll-like receptor 5	protein-coding
common_peak2-24696-12-10-0.189344366450341-0.386243247519795	chr17	44813755	44814339	+	0	NA	intron (NR_073392, intron 4 of 7)	intron (NR_073392, intron 4 of 7)	59078	NR_073425	12393	Mm.391013	NM_009820	ENSMUSG00000039153	Runx2	AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a	runt related transcription factor 2	protein-coding
unique_peak1-2514-15-6-1.20480982849805-1.32521814697968	chr16	18096232	18097004	+	0	NA	Intergenic	RLTR21|LTR|ERVK	-7335	NM_011172	19125	Mm.28456	NM_011172	ENSMUSG00000003526	Prodh	Pro-1|Pro1|Ym24d07	proline dehydrogenase	protein-coding
common_peak2-30704-11-14--0.398197011356905-0.379391706698377	chr7	112269871	112270628	+	0	NA	exon (NM_207557, exon 1 of 1)	exon (NM_207557, exon 1 of 1)	276	NM_207557	404318	Mm.377938	NM_207557	ENSMUSG00000095248	Olfr681	MOR4014	olfactory receptor 681	protein-coding
common_peak2-24648-30-45--0.35388654656514-0.51862626278861	chr17	35549392	35550753	+	0	NA	Intergenic	MERVL_2A-int|LTR|ERVL	-11720	NM_023124	15019	Mm.486287	NM_023124		H2-Q8	H-2Q8|MMS10-T|Ms10t|Qa-2|Qa-8|Qa8	histocompatibility 2, Q region locus 8	protein-coding
common_peak1-9315-14-8-0.729291158915332-0.771068449301682	chr11	94364775	94365531	+	0	NA	intron (NM_170671, intron 16 of 18)	intron (NM_170671, intron 16 of 18)	-3865	NM_027984	71889	Mm.248620	NM_027984	ENSMUSG00000010080	Epn3	2310022G12Rik	epsin 3	protein-coding
common_peak1-14812-13-22--0.745089925419244-0.690311289528838	chr3	90475992	90476710	+	0	NA	Intergenic	MTD-int|LTR|MaLR	3358	NM_013650	20201	Mm.21567	NM_013650	ENSMUSG00000056054	S100a8	60B8Ag|AI323541|B8Ag|CFAg|CP-10|Caga|MRP8|p8	S100 calcium binding protein A8 (calgranulin A)	protein-coding
common_peak1-16676-44-33-0.734429993318196-1.70773054518537	chr6	6216195	6217375	+	0	NA	Intergenic	RMER5|LTR|ERV1	-49612	NM_001177572	50799	Mm.24513	NM_015829	ENSMUSG00000015112	Slc25a13	AI785475|Ctrn	solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13	protein-coding
unique_peak2-33143-2-5--1.50241675698448-1.08602067057793	chr10	84402650	84402941	+	0	NA	intron (NM_001013441, intron 2 of 8)	intron (NM_001013441, intron 2 of 8)	22437	NM_183172	237422	Mm.18936	NM_183172		Ric8b	BC051080|Ric-8|Ric-8b	resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)	protein-coding
unique_peak2-33303-6-8--0.60452689106201-1.03789460276074	chr11	4186725	4187238	+	0	NA	Intergenic	Intergenic	20182	NM_001039537	16878	Mm.4964	NM_008501	ENSMUSG00000034394	Lif	-	leukemia inhibitory factor	protein-coding
common_peak1-14921-46-87--0.561435675388496-1.38404115112576	chr3	99140596	99141828	+	0	NA	intron (NM_009323, intron 6 of 7)	intron (NM_009323, intron 6 of 7)	83529	NM_009323	21384	Mm.88761	NM_009323	ENSMUSG00000027868	Tbx15	Tbx14|Tbx8|de	T-box 15	protein-coding
common_peak2-24581-21-23--0.0154732354549205-0.305650498375555	chr17	31511714	31512522	+	0	NA	Intergenic	RMER17C|LTR|ERVK	-11061	NM_008804	18585	Mm.10812	NM_008804	ENSMUSG00000041119	Pde9a	PDE9A1	phosphodiesterase 9A	protein-coding
unique_peak2-34414-0-7--3.84013093047421-1.80617997398389	chr14	14101184	14101576	+	0	NA	intron (NR_121589, intron 2 of 4)	Lx8|LINE|L1	15772	NR_121589	328354	Mm.252404	NM_177813	ENSMUSG00000051729	Gm5087	C630025C03|EG328354	predicted gene 5087	ncRNA
common_peak1-19216-9-14--0.717277189204299-0.53895475198017	chr9	106247578	106248020	+	0	NA	intron (NM_027354, intron 10 of 10)	intron (NM_027354, intron 10 of 10)	-23164	NM_153459	235584	Mm.275584	NM_153459	ENSMUSG00000053716	Dusp7	AU015694|Mkpx|Pyst2	dual specificity phosphatase 7	protein-coding
unique_peak1-3470-10-2-1.77145284428761-2.09384600808989	chr19	10036569	10037060	+	0	NA	Intergenic	RMER5|LTR|ERV1	-18276	NR_073181	14319	Mm.1776	NM_010239	ENSMUSG00000024661	Fth1	FHC|Fth|HFt|MFH	ferritin heavy chain 1	protein-coding
unique_peak1-5396-15-8-0.842239749113344-0.891319708951327	chr5	104137748	104138482	+	0	NA	Intergenic	(TTGG)n|Simple_repeat|Simple_repeat	-45066	NM_133919	17355	Mm.6949	NM_133919	ENSMUSG00000029313	Aff1	9630032B01Rik|AW319193|Af4|Mllt2h|Rob	AF4/FMR2 family, member 1	protein-coding
common_peak2-32160-12-17--0.521149016354673-0.417187467413082	chr9	109059307	109059858	+	0	NA	intron (NM_177069, intron 3 of 9)	B1_Mur1|SINE|Alu	4954	NM_177069	320082	Mm.188028	NM_177069	ENSMUSG00000047237	Fbxw21	E330009P21Rik	F-box and WD-40 domain protein 21	protein-coding
unique_peak1-3500-10-0-3.35641534500877-3.31132995230379	chr19	14959991	14960532	+	0	NA	Intergenic	Intergenic	-287788	NM_011600	21888	Mm.103638	NM_011600	ENSMUSG00000024642	Tle4	5730411M05Rik|AA792082|Bce-1|Bce1|ESTM13|ESTM14|Grg4|X83332|X83333	transducin-like enhancer of split 4, homolog of Drosophila E(spl)	protein-coding
common_peak1-10106-93-123-0.156873553119394-0.488329079088269	chr13	28951553	28953643	+	0	NA	intron (NR_045053, intron 2 of 8)	B1_Mur1|SINE|Alu	24693	NR_045054	72518	Mm.37454	NR_045053		2610307P16Rik	AI666457	RIKEN cDNA 2610307P16 gene	ncRNA
common_peak1-14144-16-18--0.129663871175524-0.307235046933848	chr2	131903116	131903707	+	0	NA	intron (NM_018824, intron 6 of 15)	intron (NM_018824, intron 6 of 15)	-47687	NM_175445	215653	Mm.204737	NM_175445	ENSMUSG00000027339	Rassf2	3830431H01Rik|9030412M04Rik|AI852669|AW495050	Ras association (RalGDS/AF-6) domain family member 2	protein-coding
unique_peak2-36734-5-4--0.0263084308932156-0.909929411522249	chr3	57279840	57280219	+	0	NA	intron (NM_133784, intron 4 of 6)	ID4_|SINE|ID	50697	NM_145539	229302	Mm.26618	NM_145539	ENSMUSG00000027801	Tm4sf4	Iltmp	transmembrane 4 superfamily member 4	protein-coding
common_peak2-21842-18-23--0.272043349492805-0.34651636097721	chr11	120823350	120824118	+	0	NA	3' UTR (NM_139059, exon 9 of 9)	3' UTR (NM_139059, exon 9 of 9)	13353	NM_001038654	80879	Mm.28632	NM_030696	ENSMUSG00000025161	Slc16a3	Mct3|Mct4	solute carrier family 16 (monocarboxylic acid transporters), member 3	protein-coding
common_peak1-19108-35-28-0.573389263334932-0.994385396256653	chr9	75236310	75237109	+	0	NA	exon (NM_027418, exon 6 of 6)	exon (NM_027418, exon 6 of 6)	20457	NM_027418	50772	Mm.480076	NM_015806	ENSMUSG00000042688	Mapk6	2610021I23Rik|D130053K17Rik|Erk3|Mapk4|Mapk63|Prkm4|Prkm6	mitogen-activated protein kinase 6	protein-coding
unique_peak2-37501-2-4--1.23938235115068-0.931118710592187	chr5	8681659	8682069	+	0	NA	intron (NM_011076, intron 4 of 27)	intron (NM_011076, intron 4 of 27)	21772	NM_011076	18671	Mm.207354	NM_011076	ENSMUSG00000040584	Abcb1a	Abcb4|Evi32|Mdr1a|Mdr3|P-gp|Pgp|Pgy-3|Pgy3|mdr-3	ATP-binding cassette, sub-family B (MDR/TAP), member 1A	protein-coding
common_peak2-25635-8-8--0.164702583494742-1.00793137938329	chr19	9104986	9105374	+	0	NA	intron (NR_104460, intron 4 of 6)	(GA)n|Simple_repeat|Simple_repeat	41406	NM_001286518	66395	Mm.203866	NM_009643	ENSMUSG00000069833	Ahnak	DY6	AHNAK nucleoprotein (desmoyokin)	protein-coding
unique_peak1-4522-7-1-1.79909083029819-1.80617997398389	chr3	30213710	30214180	+	0	NA	intron (NM_021442, intron 1 of 2)	intron (NM_021442, intron 1 of 2)	194464	NM_021442	14013	Mm.56965	NM_007963	ENSMUSG00000027684	Mecom	D630039M04Rik|Evi-1|Evi1|Jbo|Mds|Mds1|Mds1-Evi1|Prdm3|Znfpr1b1	MDS1 and EVI1 complex locus	protein-coding
common_peak2-27757-43-37-0.534635672080118-1.07072119362139	chr3	127928879	127929681	+	0	NA	intron (NR_045704, intron 1 of 5)	intron (NR_045704, intron 1 of 5)	5243	NR_045704	402774	Mm.209170	NR_045704		D030025E07Rik	-	RIKEN cDNA D030025E07 gene	ncRNA
common_peak1-16122-32-6-2.47173709716206-6.173243856988	chr5	66523204	66524325	+	0	NA	intron (NM_001127382, intron 2 of 7)	B4A|SINE|B4	18453	NM_001291226	245945	Mm.36863	NM_139065	ENSMUSG00000070780	Rbm47	9530077J19Rik	RNA binding motif protein 47	protein-coding
unique_peak2-36587-2-9--2.23938235115068-1.87199725847353	chr2	175640396	175640913	+	0	NA	intron (NM_001099349, intron 1 of 4).5	RLTR26|LTR|ERVK	1131	NM_001099349	100043381		NM_001099349		Gm14308	OTTMUSG00000016254	predicted gene 14308	protein-coding
common_peak2-23207-49-62-0.0290038995252671-0.307923848373175	chr15	101940550	101942045	+	0	NA	intron (NM_153533, intron 16 of 28)	intron (NM_153533, intron 16 of 28)	7878	NM_153533	209039	Mm.29389	NM_153533	ENSMUSG00000037003	Tenc1	C1-ten|nep|nph	tensin like C1 domain-containing phosphatase	protein-coding
common_peak1-16058-8-26--1.7496650842159-2.47979361197949	chr5	44135145	44135615	+	0	NA	TTS (NM_001159963)	TTS (NM_001159963)	38008	NM_001159963	242960	Mm.25794	NM_178729	ENSMUSG00000039753	Fbxl5	Fbl4|Fir4	F-box and leucine-rich repeat protein 5	protein-coding
common_peak1-13171-24-12-1.09277018462662-1.73042999925837	chr19	12005470	12006178	+	0	NA	intron (NM_172635, intron 10 of 18)	B1_Mur2|SINE|Alu	7606	NR_105960	102465601		NR_105960		Mir6994	mmu-mir-6994	microRNA mir-6994	ncRNA
common_peak2-25750-10-5-0.771452844287613-1.33892459842472	chr19	29101531	29101928	+	0	NA	exon (NM_021299, exon 3 of 5)	exon (NM_021299, exon 3 of 5)	-20244	NR_028360	67329	Mm.394933	NR_028360		1700018L02Rik	-	RIKEN cDNA 1700018L02 gene	ncRNA
common_peak2-21764-7-6--0.00826409175941478-0.97990265578305	chr11	116216600	116216991	+	0	NA	exon (NM_027258, exon 9 of 19)	exon (NM_027258, exon 9 of 19)	-20127	NM_008240	15223	Mm.378938	NM_008240	ENSMUSG00000034227	Foxj1	FKHL-13|HFH-4|Hfh4	forkhead box J1	protein-coding
unique_peak2-34559-7-4-0.477162735410827-1.09384600808989	chr14	65326293	65326640	+	0	NA	intron (NM_001081177, intron 2 of 39)	ORR1B1|LTR|MaLR	55098	NM_001081177	16554	Mm.23611	NM_001081177	ENSMUSG00000060012	Kif13b	5330429L19Rik|6030414C01|AI429803|C130021D12Rik|GAKIN	kinesin family member 13B	protein-coding
common_peak2-20077-19-15-0.402687326661686-0.519193887192487	chr1	153751760	153752476	+	0	NA	intron (NM_197990, intron 5 of 5)	intron (NM_197990, intron 5 of 5)	149614	NM_001039644	66967	Mm.337691	NM_001039644	ENSMUSG00000043019	Edem3	2310050N11Rik	ER degradation enhancer, mannosidase alpha-like 3	protein-coding
unique_peak1-3217-8-1-2.00522241794757-2.05605744720049	chr18	57871536	57872005	+	0	NA	intron (NM_029290, intron 6 of 6)	Lx8|LINE|L1	-73531	NR_045360	70157	Mm.490532	NR_045360		2210409D07Rik	-	RIKEN cDNA 2210409D07 gene	ncRNA
common_peak2-32054-12-33--1.4386868561627-2.25377313481387	chr9	85843120	85844217	+	0	NA	Intergenic	Intergenic	107209	NM_001164792	21983	Mm.20864	NM_011627	ENSMUSG00000035274	Tpbg	5T4|AW495680|WAIF1	trophoblast glycoprotein	protein-coding
unique_peak1-1912-15-5-1.4272022498345-1.61682445937017	chr14	70174926	70175604	+	0	NA	intron (NM_020275, intron 4 of 7)	intron (NM_020275, intron 4 of 7)	7986	NM_020275	21933	Mm.193430	NM_020275	ENSMUSG00000022074	Tnfrsf10b	DR5|KILLER|Ly98|MK|TRAILR2|TRICK2A|TRICK2B|TRICKB	tumor necrosis factor receptor superfamily, member 10b	protein-coding
common_peak1-14385-53-72--0.0488515464640891-0.302548520215158	chr2	168954501	168956444	+	0	NA	Intergenic	Intergenic	151703	NR_040326	75508	Mm.271256	NR_040326	ENSMUSG00000086348	1700017J07Rik	-	RIKEN cDNA 1700017J07 gene	ncRNA
common_peak1-11616-32-18-1.03116450577607-2.02129774107186	chr16	18425865	18426806	+	0	NA	promoter-TSS (NM_013711)	promoter-TSS (NM_013711)	-175	NM_013711	26462	Mm.390906	NM_013711	ENSMUSG00000075704	Txnrd2	AA118373|ESTM573010|TGR|Tr3|Trxr2|Trxrd2	thioredoxin reductase 2	protein-coding
unique_peak1-271-9-3-1.18961340640422-1.57096726280955	chr1	97593496	97593991	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	19352	NR_040479	75381	Mm.417807	NR_040479		4930598F16Rik	-	RIKEN cDNA 4930598F16 gene	ncRNA
unique_peak2-34975-4-4--0.345388608740609-0.864171920961574	chr15	98727728	98728163	+	0	NA	intron (NM_007857, intron 1 of 2)	intron (NM_007857, intron 1 of 2)	1026	NM_007857	13363	Mm.324688	NM_007857	ENSMUSG00000023000	Dhh	C78960	desert hedgehog	protein-coding
unique_peak2-33717-12-28--1.20920501003993-1.52081014994907	chr11	113537007	113537957	+	0	NA	intron (NM_138598, intron 2 of 2)	intron (NM_138598, intron 2 of 2)	7983	NM_138598	28081	Mm.351688	NM_138598	ENSMUSG00000041629	Fam104a	D11Wsu99e	family with sequence similarity 104, member A	protein-coding
unique_peak2-39500-4-8--1.19338551529556-1.21878474469819	chr9	61321957	61322316	+	0	NA	Intergenic	Intergenic	101963	NM_001083927	21887	Mm.24255	NM_009389	ENSMUSG00000032280	Tle3	2610103N05Rik|ESG|Grg3a|Grg3b|mKIAA1547	transducin-like enhancer of split 3, homolog of Drosophila E(spl)	protein-coding
unique_peak1-4183-7-0-2.79909083029819-2.40823996531185	chr2	115609972	115610482	+	0	NA	Intergenic	MTD|LTR|MaLR	145766	NR_035476	100316703		NR_035476		Mir1951	mmu-mir-1951	microRNA 1951	ncRNA
unique_peak1-3862-33-9-2.00940946763817-4.90247409987431	chr2	8734443	8735866	+	0	NA	Intergenic	Intergenic	-375988	NR_038180	73438	Mm.23558	NR_038180	ENSMUSG00000085580	1700061F12Rik	-	RIKEN cDNA 1700061F12 gene	ncRNA
common_peak2-21642-7-10--0.660340788339108-1.12966497611638	chr11	101627949	101628447	+	0	NA	3' UTR (NM_144831, exon 23 of 23)	3' UTR (NM_144831, exon 23 of 23)	18426	NM_008815	18612	Mm.5025	NM_008815	ENSMUSG00000017724	Etv4	AW414408|Pea-3|Pea3	ets variant 4	protein-coding
unique_peak2-34758-3-7--1.41398308995928-1.23214870625617	chr15	57741326	57741772	+	0	NA	Intergenic	PB1D10|SINE|Alu	-2205	NM_001081396	210544	Mm.390835	NM_199300	ENSMUSG00000022364	Tbc1d31	4B3|D330013L20Rik|Gm85|Wdr67	TBC1 domain family, member 31	protein-coding
unique_peak2-33009-10-23--1.22854715571239-1.44380006500971	chr10	62980178	62980815	+	0	NA	intron (NM_001164376, intron 2 of 17)	L1Md_T|LINE|L1	60237	NM_001164376	216033	Mm.444692	NM_177612	ENSMUSG00000060843	Ctnna3	4930429L08Rik|4933408A16|Catna3|Vr22	catenin (cadherin associated protein), alpha 3	protein-coding
unique_peak1-5178-17-5-1.63333383748388-2.19184853030482	chr5	30625030	30625713	+	0	NA	intron (NM_001033460, intron 1 of 16)	intron (NM_001033460, intron 1 of 16)	17457	NM_001033460	381738	Mm.389604	NM_001033460	ENSMUSG00000073102	Drc1	Ccdc164|Gm1060|b2b1654Clo	dynein regulatory complex subunit 1	protein-coding
unique_peak1-894-10-4-1.03448725012141-1.5150158574804	chr11	34833860	34834378	+	0	NA	Intergenic	Lx7|LINE|L1	-100839	NM_011412	20564	Mm.478604	NM_011412	ENSMUSG00000056427	Slit3	Slil2|Slit1	slit homolog 3 (Drosophila)	protein-coding
unique_peak2-37038-1-5--2.2120195109379-1.32905871926422	chr3	131967234	131967657	+	0	NA	Intergenic	L1Md_F2|LINE|L1	219189	NM_020265	56811	Mm.103593	NM_020265	ENSMUSG00000028031	Dkk2	-	dickkopf homolog 2 (Xenopus laevis)	protein-coding
unique_peak2-32749-1-10--3.08648862885404-2.57096726280955	chr1	167388057	167388597	+	0	NA	intron (NM_028759, intron 1 of 18)	intron (NM_028759, intron 1 of 18)	2267	NM_028759	74106	Mm.227605	NM_028759	ENSMUSG00000026571	Dcaf6	1200006M05Rik|Iqwd1|PC326	DDB1 and CUL4 associated factor 6	protein-coding
unique_peak2-37612-6-5--0.0195643903408542-0.947717972411649	chr5	64389622	64390044	+	0	NA	Intergenic	L1MC3|LINE|L1	-29697	NM_145923	100532	Mm.243632	NM_145923	ENSMUSG00000047881	Rell1	AA536743	RELT-like 1	protein-coding
common_peak2-20744-17-22--0.305265617851975-0.348739088570342	chr10	111473140	111473883	+	0	NA	Intergenic	Intergenic	-23734	NM_027018	69286	Mm.47058	NM_027018	ENSMUSG00000020213	Glipr1l1	1700011E04Rik	GLI pathogenesis-related 1 like 1	protein-coding
unique_peak2-39453-7-11--0.785871670422967-1.21681515183528	chr9	50554854	50555403	+	0	NA	promoter-TSS (NM_025865)	promoter-TSS (NM_025865)	-502	NM_025865	66952	Mm.273375	NM_025865	ENSMUSG00000032062	2310030G06Rik	2610024D04Rik|AV017521	RIKEN cDNA 2310030G06 gene	protein-coding
unique_peak2-39399-1-11--3.2120195109379-2.83420869758413	chr9	31009042	31009620	+	0	NA	intron (NM_001102455, intron 1 of 16)	AT_rich|Low_complexity|Low_complexity	10069	NM_001102455	11804	Mm.19133	NM_009691	ENSMUSG00000031996	Aplp2	AI790698|APLP-2	amyloid beta (A4) precursor-like protein 2	protein-coding
unique_peak1-471-14-0-3.89921616035764-4.8164799306237	chr1	173418191	173418787	+	0	NA	Intergenic	MuLV-int|LTR|ERV1	-15120	NM_019484	56009	Mm.389208	NM_019484	ENSMUSG00000060244	Alyref2	C130042O11Rik|REF2|Refbp2	Aly/REF export factor 2	protein-coding
unique_peak2-35690-6-10--0.894033508256995-1.21398586181642	chr18	21299586	21300187	+	0	NA	intron (NM_001033445, intron 4 of 5)	intron (NM_001033445, intron 4 of 5)	69041	NM_008586	17288	Mm.2682	NM_008586	ENSMUSG00000024313	Mep1b	Mep-1b	meprin 1 beta	protein-coding
common_peak2-23123-33-21-0.871905943888232-1.60774463804084	chr14	99324111	99324659	+	0	NA	Intergenic	RMER13B|LTR|ERVK	120970	NM_175245	76789	Mm.38912	NM_175245	ENSMUSG00000033186	Mzt1	2410129H14Rik|AI120158|Mozart1	mitotic spindle organizing protein 1	protein-coding
unique_peak2-33491-9-18--1.05831410703937-0.965105923112245	chr11	70764034	70764784	+	0	NA	intron (NR_075087, intron 7 of 14)	intron (NR_075087, intron 7 of 14)	19066	NM_172394	19069	Mm.288962	NM_172394	ENSMUSG00000040667	Nup88	Nup84|Prei2	nucleoporin 88	protein-coding
common_peak2-22256-14-17--0.270708841084668-0.328191099940267	chr13	4713372	4713950	+	0	NA	Intergenic	Intergenic	-105251	NM_018859	56043	Mm.251908	NM_018859	ENSMUSG00000045410	Akr1e1	1810061I10Rik|Akr1e2	aldo-keto reductase family 1, member E1	protein-coding
unique_peak2-36222-5-10--1.16381195464315-1.33892459842472	chr2	35501654	35502255	+	0	NA	intron (NM_001290641, intron 2 of 15)	MIRb|SINE|MIR	24453	NM_001114124	69601	Mm.29629	NM_001001602	ENSMUSG00000026883	Dab2ip	2310011D08Rik|AI480459|Aip1|mKIAA1743	disabled 2 interacting protein	protein-coding
unique_peak1-1550-16-2-2.53330114154691-3.78760380288747	chr13	23930295	23931067	+	0	NA	promoter-TSS (NM_001164743)	promoter-TSS (NM_001164743)	-622	NM_001164743	105355	Mm.27038	NM_134069	ENSMUSG00000036083	Slc17a3	AW261723|Npt4	solute carrier family 17 (sodium phosphate), member 3	protein-coding
unique_peak1-4948-23-3-2.72176750450908-4.84202874224997	chr4	96552830	96553624	+	0	NA	Intergenic	Lx2|LINE|L1	-101376	NM_001081284	620779	Mm.439625	NM_001081284	ENSMUSG00000078639	Gm12695	OTTMUSG00000008003	predicted gene 12695	protein-coding
unique_peak1-1810-8-0-3.00522241794757-2.70926996097583	chr14	26557297	26557732	+	0	NA	intron (NM_001101433, intron 2 of 3)	intron (NM_001101433, intron 2 of 3)	30828	NM_001101433	71918	Mm.41904	NM_001101433	ENSMUSG00000055538	Zcchc24	2310047A01Rik	zinc finger, CCHC domain containing 24	protein-coding
unique_peak1-3561-16-4-1.7963355473807-2.18192634393779	chr19	26845502	26846354	+	0	NA	intron (NM_026003, intron 5 of 8)	intron (NM_026003, intron 5 of 8)	23035	NM_026003	67155	Mm.491146	NM_011416	ENSMUSG00000024921	Smarca2	2610209L14Rik|SNF2alpha|Snf2l2|brahma|brm	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	protein-coding
common_peak1-12002-12-7-0.648775985087639-0.697979855752659	chr17	13700109	13700723	+	0	NA	intron (NR_045437, intron 2 of 3)	intron (NR_045437, intron 2 of 3)	-13906	NR_030763	272667	Mm.444718	NR_030763	ENSMUSG00000079711	Smok4a	4930513D10Rik|Smok2c	sperm motility kinase 4A	pseudo
common_peak2-25368-151-212-0.217431291774913-0.913444789368251	chr18	82691232	82693612	+	0	NA	intron (NM_001025245, intron 3 of 3)	intron (NM_001025245, intron 3 of 3)	-31433	NM_001025256	17196	Mm.252063	NM_010777	ENSMUSG00000041607	Mbp	C76307|Hmbpr|R75289|golli-mbp|mld|shi	myelin basic protein	protein-coding
unique_peak2-38413-3-4--0.73591118484664-0.864171920961574	chr7	24254863	24255210	+	0	NA	Intergenic	B1_Mm|SINE|Alu	35572	NM_001101562	622032	Mm.474428	NM_001101562	ENSMUSG00000090715	Vmn1r167	EG622032|Gm6279	vomeronasal 1 receptor 167	protein-coding
unique_peak2-33347-2-5--1.50241675698448-1.08602067057793	chr11	28834051	28834426	+	0	NA	Intergenic	MusHAL1|LINE|L1	81033	NM_146015	216616	Mm.44176	NM_146015	ENSMUSG00000020467	Efemp1	-	epidermal growth factor-containing fibulin-like extracellular matrix protein 1	protein-coding
common_peak2-28640-8-9--0.316705676939792-1.03275496310833	chr5	29710449	29710946	+	0	NA	Intergenic	RMER19B|LTR|ERVK	-5767	NM_020295	56873	Mm.41572	NM_020295	ENSMUSG00000010721	Lmbr1	1110048D14Rik|AU017641	limb region 1	protein-coding
common_peak2-20314-25-51--0.838589812795986-1.63185160949148	chr10	42761498	42762493	+	0	NA	intron (NM_175407, intron 5 of 6)	intron (NM_175407, intron 5 of 6)	132341	NM_175407	109205	Mm.153750	NM_175407	ENSMUSG00000038248	Sobp	2900009C16Rik|5330439J01Rik|JXC1|jc	sine oculis-binding protein homolog (Drosophila)	protein-coding
common_peak1-14624-66-83-0.126166241647081-0.401582499764368	chr3	53462641	53464187	+	0	NA	Intergenic	Intergenic	-2137	NM_172862	242022	Mm.38378	NM_172862	ENSMUSG00000037016	Frem2	6030440P17Rik|8430406N05Rik|Gm409|b2b1562Clo|my|ne|nv1	Fras1 related extracellular matrix protein 2	protein-coding
common_peak1-15109-22-12-0.946844386946312-1.31435121412491	chr3	134338982	134339980	+	0	NA	Intergenic	Intergenic	-152490	NM_021382	21338	Mm.103810	NM_021382	ENSMUSG00000028172	Tacr3	Nk3r|Nkr|Tac3r	tachykinin receptor 3	protein-coding
common_peak1-17418-6-7--0.434601889619698-0.97990265578305	chr7	7171291	7171771	+	0	NA	intron (NR_003555, intron 6 of 6)	L1Md_T|LINE|L1	-8822	NM_145577	232855	Mm.360403	NM_145577	ENSMUSG00000066838	Zfp772	-	zinc finger protein 772	protein-coding
unique_peak1-3610-22-6-1.8399291830298-3.01815507148775	chr19	32737295	32738308	+	0	NA	exon (NM_011864, exon 11 of 13)	exon (NM_011864, exon 11 of 13)	43306	NM_011864	23972	Mm.203916	NM_011864	ENSMUSG00000024899	Papss2	1810018P12Rik|AI159688|AtpsU2|Atpsk2|Sk2|bm	3'-phosphoadenosine 5'-phosphosulfate synthase 2	protein-coding
unique_peak2-32647-9-24--1.4542427833705-1.83731222263754	chr1	131827964	131828779	+	0	NA	intron (NM_172485, intron 14 of 27)	intron (NM_172485, intron 14 of 27)	491205	NM_007827	13137	Mm.436759	NM_007827	ENSMUSG00000026401	Daf2	AI323748|Cd55b|Daf|Daf-TM|TM-DAF	decay accelerating factor 2	protein-coding
common_peak2-23342-9-7-0.18961340640422-1.05908390183068	chr15	38932212	38932635	+	0	NA	intron (NM_172402, intron 3 of 6)	PB1D10|SINE|Alu	11839	NM_172402	69906	Mm.17875	NM_172402	ENSMUSG00000022299	Slc25a32	2610043O12Rik|Mftc	solute carrier family 25, member 32	protein-coding
common_peak1-9620-29-27-0.304935158557507-0.525808162491371	chr11	121236649	121237176	+	0	NA	intron (NM_139147, intron 1 of 5)	B1F1|SINE|Alu	11606	NR_106095	102465713		NR_106095		Mir7236	mmu-mir-7236	microRNA mir-7236	ncRNA
common_peak2-21821-18-18-0.0649916377847664-0.323898164595606	chr11	119913786	119914285	+	0	NA	Intergenic	Intergenic	-5576	NM_007377	11302	Mm.6826	NM_007377	ENSMUSG00000025375	Aatk	AATYK|aatyk1|mKIAA0641	apoptosis-associated tyrosine kinase	protein-coding
common_peak2-20105-67-70-0.394664363278313-1.00811678756175	chr1	160212188	160213846	+	0	NA	intron (NM_207583, intron 2 of 7)	intron (NM_207583, intron 2 of 7)	73374	NM_207583	240843	Mm.329579	NM_207583	ENSMUSG00000004031	Brinp2	6430517E21Rik|BB361039|Fam5b|mKIAA1747	bone morphogenic protein/retinoic acid inducible neural-specific 2	protein-coding
common_peak1-13138-28-7-2.05295911982146-4.28647646517482	chr19	9956036	9957325	+	0	NA	intron (NM_016692, intron 10 of 17)	intron (NM_016692, intron 10 of 17)	17343	NM_016692	16319	Mm.29755	NM_016692	ENSMUSG00000024660	Incenp	2700067E22Rik|AU019509|C130081E20|C77457	inner centromere protein	protein-coding
common_peak1-17634-12-19--0.673152109799724-0.546772548767014	chr7	47050657	47051233	+	0	NA	Intergenic	Intergenic	277809	NM_001004139	70227	Mm.333800	NM_001004139	ENSMUSG00000068959	Zfp619	3000002G13Rik	zinc finger protein 619	protein-coding
unique_peak1-5-7-4-0.477162735410827-1.09384600808989	chr1	40140432	40140919	+	0	NA	promoter-TSS (NM_010555)	promoter-TSS (NM_010555)	-938	NM_010555	16178	Mm.1349	NM_010555	ENSMUSG00000026073	Il1r2	CD121b|Il1r-2	interleukin 1 receptor, type II	protein-coding
unique_peak2-38298-11-16--0.578769256998726-0.503257505534083	chr6	135324703	135325492	+	0	NA	intron (NM_001288627, intron 1 of 4)	intron (NM_001288627, intron 1 of 4)	7586	NM_001288627	13730	Mm.182785	NM_010128	ENSMUSG00000030208	Emp1	I-8-09|TMP	epithelial membrane protein 1	protein-coding
unique_peak2-38766-3-7--1.41398308995928-1.23214870625617	chr7	123110850	123111219	+	0	NA	intron (NM_001025559, intron 1 of 15)	intron (NM_001025559, intron 1 of 15)	27566	NM_011445	20679	Mm.323365	NM_011445	ENSMUSG00000051910	Sox6	AI987981|SOX-LZ	SRY (sex determining region Y)-box 6	protein-coding
unique_peak1-12-20-1-3.48807478459119-5.43827864561946	chr1	131661646	131662543	+	0	NA	intron (NM_172485, intron 9 of 27)	intron (NM_172485, intron 9 of 27)	492213	NM_172485	210417	Mm.380518	NM_172485	ENSMUSG00000042581	Thsd7b	1700074E13Rik|B930082A18|D130067I03Rik	thrombospondin, type I, domain containing 7B	protein-coding
common_peak2-22435-18-17-0.142994149786039-0.353907621462753	chr13	38634748	38635456	+	0	NA	Intergenic	Intergenic	-14409	NM_001289598	105245	Mm.28622	NM_145367	ENSMUSG00000038991	Txndc5	AL022641|ERp46|PC-TRP	thioredoxin domain containing 5	protein-coding
unique_peak1-6398-9-1-2.18961340640422-2.31132995230379	chr7	80171054	80171704	+	0	NA	Intergenic	Intergenic	75575	NR_046024	625243	Mm.261798	NR_046024		Gm6567	-	predicted gene 6567	ncRNA
common_peak2-21738-8-12--0.695217300193522-0.475924844171029	chr11	115420095	115420542	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-5440	NM_001002929	445007	Mm.4379	NM_001002929	ENSMUSG00000020739	Nup85	Pcnt1|frount	nucleoporin 85	protein-coding
common_peak1-12917-15-25--0.688274967585436-0.73354163167379	chr18	90509998	90510760	+	0	NA	Intergenic	Intergenic	-169167	NM_198295	67988	Mm.268041	NM_198295	ENSMUSG00000024614	Tmx3	6430411B10Rik|A730024F05Rik|AV259382|Txndc10|mKIAA1830	thioredoxin-related transmembrane protein 3	protein-coding
unique_peak2-34933-6-6--0.241956811677302-0.947717972411649	chr15	86086357	86086750	+	0	NA	intron (NM_145476, intron 4 of 12)	intron (NM_145476, intron 4 of 12)	41664	NM_145476	223754	Mm.28904	NM_145476	ENSMUSG00000051864	Tbc1d22a	BC023106|D15Ertd781e	TBC1 domain family, member 22a	protein-coding
common_peak1-10573-80-77-0.565173547507103-1.9449907310133	chr14	25473747	25477082	+	0	NA	Intergenic	Intergenic	165511	NM_011297	20088	Mm.16775	NM_011297	ENSMUSG00000025290	Rps24	-	ribosomal protein S24	protein-coding
common_peak2-25237-12-10-0.189344366450341-0.386243247519795	chr18	64341677	64342198	+	0	NA	intron (NR_045366, intron 2 of 5)	intron (NR_045366, intron 2 of 5)	-72076	NM_009182	20451	Mm.252110	NM_009182	ENSMUSG00000056812	St8sia3	AI847333|ST8SiaIII|Siat8c	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	protein-coding
common_peak2-25235-19-25--0.297752391479405-0.376654945067947	chr18	64185785	64187072	+	0	NA	Intergenic	Intergenic	-227585	NM_009182	20451	Mm.252110	NM_009182	ENSMUSG00000056812	St8sia3	AI847333|ST8SiaIII|Siat8c	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	protein-coding
common_peak2-30126-11-7-0.508693584251613-1.21681515183528	chr6	137569273	137569609	+	0	NA	intron (NM_007945, intron 1 of 21)	L1Md_T|LINE|L1	28365	NM_001271588	13860	Mm.235346	NM_007945	ENSMUSG00000015766	Eps8	AW261790	epidermal growth factor receptor pathway substrate 8	protein-coding
common_peak1-18135-23-26--0.0331199976543877-0.301029995663988	chr8	10665002	10665930	+	0	NA	Intergenic	Intergenic	216988	NR_040705	320014	Mm.403203	NR_040705		B930025P03Rik	-	RIKEN cDNA B930025P03 gene	ncRNA
unique_peak1-2199-20-6-1.68071986253359-2.41165147706372	chr15	66851728	66852582	+	0	NA	Intergenic	MTD|LTR|MaLR	-50952	NM_008681	17988	Mm.30837	NM_008681	ENSMUSG00000005125	Ndrg1	CAP43|CMT4D|DRG1|HMSNL|NMSL|Ndr1|Ndrl|PROXY1|RTP|TDD5	N-myc downstream regulated gene 1	protein-coding
common_peak2-19766-9-6-0.382258484346616-1.11707584880836	chr1	79823211	79823506	+	0	NA	intron (NM_009255, intron 1 of 8)	L1Md_A|LINE|L1	31882	NM_009255	20720	Mm.3093	NM_009255	ENSMUSG00000026249	Serpine2	B230326M24Rik|PAI-1|PI-7|PI7|PN-1|Spi4	serine (or cysteine) peptidase inhibitor, clade E, member 2	protein-coding
unique_peak2-34132-6-22--1.95816384567671-2.41165147706372	chr13	22042301	22043030	+	0	NA	intron (NM_183014, intron 5 of 5)	(TTTG)n|Simple_repeat|Simple_repeat	5702	NM_183014	193452	Mm.187446	NM_183014	ENSMUSG00000006720	Zfp184	4930500C15Rik	zinc finger protein 184 (Kruppel-like)	protein-coding
unique_peak2-35267-5-4--0.0263084308932156-0.909929411522249	chr17	56819712	56820022	+	0	NA	intron (NR_045519, intron 1 of 16)	B1_Mus2|SINE|Alu	7219	NM_027933	71810	Mm.29608	NM_027933	ENSMUSG00000002372	Ranbp3	2610024N24Rik|AA408221	RAN binding protein 3	protein-coding
common_peak1-16583-35-64--0.59099755456595-1.20183724428356	chr5	147860082	147861254	+	0	NA	intron (NM_080795, intron 1 of 9)	intron (NM_080795, intron 1 of 9)	27480	NM_080795	140887	Mm.272203	NM_080795	ENSMUSG00000016520	Lnx2	9630046H24|AW209022	ligand of numb-protein X 2	protein-coding
common_peak2-26680-27-41--0.400771471883525-0.542588322087496	chr2	124609760	124611152	+	0	NA	Intergenic	ORR1E|LTR|MaLR	131139	NM_199239	214968	Mm.330536	NM_172537	ENSMUSG00000027200	Sema6d	1110067B02Rik|AA409156|D330011G23|mKIAA1479	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	protein-coding
unique_peak1-4156-14-4-1.57728806547028-2.4322161449009	chr2	102693149	102693906	+	0	NA	intron (NM_001039150, intron 4 of 13)	intron (NM_001039150, intron 4 of 13)	48295	NM_001177785	12505	Mm.423621	NM_009851	ENSMUSG00000005087	Cd44	AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1	CD44 antigen	protein-coding
common_peak2-25676-18-23--0.272043349492805-0.34651636097721	chr19	11120951	11121512	+	0	NA	TTS (NR_102366)	TTS (NR_102366)	3825	NR_102366	107350	Mm.6381	NM_001177351	ENSMUSG00000075010	AW112010	-	expressed sequence AW112010	ncRNA
unique_peak2-39471-3-5--0.998945590680433-0.96108193396963	chr9	56437406	56437826	+	0	NA	Intergenic	Intergenic	95444	NM_181074	235402	Mm.246605	NM_181074	ENSMUSG00000049556	Lingo1	4930471K13Rik|AV148400|LERN1|LINGO-1|Lrrn6a|UNQ201	leucine rich repeat and Ig domain containing 1	protein-coding
common_peak2-27641-13-9-0.456543935750406-0.53895475198017	chr3	107717447	107717966	+	0	NA	Intergenic	B3|SINE|B2	16957	NM_026672	68312	Mm.458189	NM_026672	ENSMUSG00000004035	Gstm7	0610005A07Rik|AI894236|Cd203c	glutathione S-transferase, mu 7	protein-coding
common_peak2-24925-92-145--0.0974724751772529-0.363634746336169	chr17	87445969	87447534	+	0	NA	Intergenic	Intergenic	21850	NM_019936	56724	Mm.109329	NM_019936	ENSMUSG00000024146	Cript	1200020A08Rik|AA589469	cysteine-rich PDZ-binding protein	protein-coding
common_peak1-7838-10-16--0.73104749624157-0.604422558181019	chr1	130717480	130718154	+	0	NA	Intergenic	Intergenic	-228941	NM_009911	12767	Mm.1401	NM_009911	ENSMUSG00000045382	Cxcr4	CD184|Cmkar4|LESTR|PB-CKR|PBSF/SDF-1|Sdf1r|b2b220Clo	chemokine (C-X-C motif) receptor 4	protein-coding
unique_peak1-4031-7-1-1.79909083029819-1.80617997398389	chr2	50966968	50967449	+	0	NA	Intergenic	Intergenic	37423	NM_028810	74194	Mm.46497	NM_028810	ENSMUSG00000017144	Rnd3	2610017M01Rik|AI661404|Arhe|Rhoe	Rho family GTPase 3	protein-coding
common_peak1-10693-38-46-0.0168638076208927-0.31027100108714	chr14	55559369	55560732	+	0	NA	TTS (NM_001164171)	TTS (NM_001164171)	4716	NM_029390	67272	Mm.41614	NM_026066	ENSMUSG00000040759	Cmtm5	1500005P16Rik|2900052H21Rik|Cklfsf5	CKLF-like MARVEL transmembrane domain containing 5	protein-coding
unique_peak2-39100-3-7--1.41398308995928-1.23214870625617	chr8	78740542	78740945	+	0	NA	Intergenic	Intergenic	683329	NR_028579	100039211	Mm.367571	NR_028579	ENSMUSG00000074235	Gm10649	ENSMUSG00000074235	predicted gene 10649	ncRNA
unique_peak2-34873-4-15--2.02346051385325-2.4322161449009	chr15	77928571	77928967	+	0	NA	intron (NM_007583, intron 1 of 3)	intron (NM_007583, intron 1 of 3)	20941	NM_007583	12300	Mm.277338	NM_007583		Cacng2	AW060990|B230105C07Rik|B930041E13Rik|stargazer|stargazin|stg|wag|waggler	calcium channel, voltage-dependent, gamma subunit 2	protein-coding
common_peak2-24261-40-37-0.411048169307513-0.786737236353031	chr16	93603431	93604659	+	0	NA	promoter-TSS (NM_145482)	promoter-TSS (NM_145482)	15	NM_145482	224440	Mm.10628	NM_145482	ENSMUSG00000022948	Setd4	AY037804|C21orf18|ORF21	SET domain containing 4	protein-coding
common_peak2-21382-37-32-0.481598952127365-0.849650211186447	chr11	79214213	79214913	+	0	NA	intron (NM_010897, intron 5 of 57)	MERVL_2A-int|LTR|ERVL	61169	NM_010897	18015	Mm.255596	NM_010897	ENSMUSG00000020716	Nf1	AW494271|E030030H24Rik|Nf-1	neurofibromatosis 1	protein-coding
common_peak2-28451-8-15--0.994777582052429-0.771068449301683	chr4	150725024	150725500	+	0	NA	intron (NM_001081557, intron 5 of 23)	intron (NM_001081557, intron 5 of 23)	-293200	NM_009498	22319	Mm.273930	NM_009498	ENSMUSG00000028955	Vamp3	D130027G05Rik|VAMP-3|ceb	vesicle-associated membrane protein 3	protein-coding
common_peak2-28291-9-8-0.0196884049619079-1.03275496310833	chr4	130573815	130574219	+	0	NA	Intergenic	Intergenic	73717	NM_010769	17180	Mm.271796	NM_010769	ENSMUSG00000040533	Matn1	CMP|Crtm|Mat1|matrilin-1	matrilin 1, cartilage matrix protein	protein-coding
common_peak1-17809-32-68--0.829432437558509-2.02930105745011	chr7	100931038	100932067	+	0	NA	Intergenic	Lx3B|LINE|L1	703163	NM_021427	58238	Mm.113787	NM_021427		Fam181b	A830059I20Rik|AB041569	family with sequence similarity 181, member B	protein-coding
common_peak2-21598-5-6--0.511735258063458-0.947717972411649	chr11	98942540	98942937	+	0	NA	intron (NM_172564, intron 2 of 12)	(CA)n|Simple_repeat|Simple_repeat	7882	NM_172564	217169	Mm.262067	NM_172564	ENSMUSG00000017607	Tns4	9930017A07Rik|AA589547|AU016405|Cten	tensin 4	protein-coding
common_peak1-11371-14-9-0.577288065470282-0.630231561310125	chr15	94899963	94900669	+	0	NA	intron (NM_178789, intron 6 of 7)	intron (NM_178789, intron 6 of 7)	79433	NR_015482	100043315	Mm.159041	NR_015482		LOC100043315	-	uncharacterized LOC100043315	ncRNA
common_peak2-30887-16-27--0.689091279789542-0.798885335210229	chr7	141466873	141467842	+	0	NA	intron (NM_001081331, intron 5 of 7)	intron (NM_001081331, intron 5 of 7)	-50577	NM_007400	11489	Mm.439714	NM_007400	ENSMUSG00000054555	Adam12	Mltna|mKIAA4001	a disintegrin and metallopeptidase domain 12 (meltrin alpha)	protein-coding
common_peak1-14316-30-12-1.46923569135078-3.02795537370072	chr2	163506122	163507554	+	0	NA	intron (NM_001039390, intron 2 of 4)	intron (NM_001039390, intron 2 of 4)	-12935	NM_011106	18769	Mm.10091	NM_011106	ENSMUSG00000035268	Pkig	PKIgamma	protein kinase inhibitor, gamma	protein-coding
common_peak2-23859-17-23--0.366666162516118-0.383878263347744	chr15	102279397	102280227	+	0	NA	intron (NM_144547, intron 6 of 10)	intron (NM_144547, intron 6 of 10)	4014	NM_144547	110542	Mm.60331	NM_144547	ENSMUSG00000023047	Amhr2	Misiir|Misrii|Mrii	anti-Mullerian hormone type 2 receptor	protein-coding
unique_peak2-38873-8-5-0.420259917226415-1.10484139239135	chr8	10977213	10977585	+	0	NA	Intergenic	GA-rich|Low_complexity|Low_complexity	-30451	NR_046017	619321	Mm.403007	NR_046017	ENSMUSG00000096938	9530052E02Rik	-	RIKEN cDNA 9530052E02 gene	ncRNA
unique_peak2-37138-6-8--0.60452689106201-1.03789460276074	chr4	21766850	21767197	+	0	NA	Intergenic	MT2C_Mm|LTR|ERVL	-7707	NM_025669	66625	Mm.100117	NM_025669	ENSMUSG00000028248	Pnisr	5730406M06Rik|AA673174|Pinsr|Sfrs18|Srsf18	PNN interacting serine/arginine-rich	protein-coding
common_peak2-28987-123-180-0.0959773629236009-0.399435670783902	chr5	106695439	106697233	+	0	NA	Intergenic	Intergenic	190849	NM_001005477	104382	Mm.271593	NM_001005477	ENSMUSG00000034384	Barhl2	E130309B19Rik|MBH1	BarH-like 2 (Drosophila)	protein-coding
unique_peak1-202-15-2-2.4272022498345-3.53487848679804	chr1	84404582	84405222	+	0	NA	intron (NM_152915, intron 9 of 12)	RMER1B|Other|Other	-123682	NM_001003948	98496	Mm.187470	NM_001003948	ENSMUSG00000045658	Pid1	5033414K04Rik|NYGGF4	phosphotyrosine interaction domain containing 1	protein-coding
common_peak2-23907-14-26--0.855671341805824-0.949797625454538	chr16	4756778	4757123	+	0	NA	intron (NM_010443, intron 1 of 5)	C-rich|Low_complexity|Low_complexity	15337	NM_010443	15369	Mm.272866	NM_010443	ENSMUSG00000004070	Hmox2	HO-2|HO2	heme oxygenase (decycling) 2	protein-coding
common_peak2-20507-15-12-0.311725032414564-0.425539671739611	chr10	59636916	59637290	+	0	NA	Intergenic	Intergenic	44905	NM_016803	53374	Mm.12866	NM_016803	ENSMUSG00000057337	Chst3	C6ST|C6ST-1|GST-0	carbohydrate (chondroitin 6/keratan) sulfotransferase 3	protein-coding
unique_peak1-379-14-5-1.31425365963649-1.4372489031793	chr1	151665104	151665866	+	0	NA	Intergenic	Intergenic	142929	NM_008869	18783	Mm.4186	NM_008869	ENSMUSG00000056220	Pla2g4a	Pla2g4|cPLA2|cPLA2alpha	phospholipase A2, group IVA (cytosolic, calcium-dependent)	protein-coding
unique_peak1-6291-13-4-1.45654393575041-2.23384849113406	chr7	29391096	29391709	+	0	NA	Intergenic	Intergenic	-8199	NM_027470	70584	Mm.21876	NM_027470	ENSMUSG00000030602	Pak4	5730488L07Rik|AW555722|mKIAA1142	p21 protein (Cdc42/Rac)-activated kinase 4	protein-coding
common_peak1-11864-86-73-0.766182428403403-3.40349440087085	chr16	92619988	92622145	+	0	NA	intron (NM_001111022, intron 5 of 6)	intron (NM_001111022, intron 5 of 6)	76508	NM_001111023	12394	Mm.4081	NM_009821	ENSMUSG00000022952	Runx1	AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b	runt related transcription factor 1	protein-coding
common_peak1-12922-35-24-0.78751406868778-1.48724131519612	chr19	3685814	3686948	+	0	NA	exon (NM_008513, exon 1 of 23)	exon (NM_008513, exon 1 of 23)	183	NM_008513	16973	Mm.274581	NM_008513	ENSMUSG00000024913	Lrp5	BMND1|HBM|LR3|LRP7|OPPG|mKIAA4142	low density lipoprotein receptor-related protein 5	protein-coding
common_peak2-25787-19-18-0.154759813218101-0.351190433797598	chr19	36118964	36119700	+	0	NA	intron (NM_008315, intron 1 of 2)	intron (NM_008315, intron 1 of 2)	12518	NM_008315	15566	Mm.254266	NM_008315	ENSMUSG00000024798	Htr7	5-HT7	5-hydroxytryptamine (serotonin) receptor 7	protein-coding
common_peak2-23959-15-29--0.894725845052863-1.1282783422172	chr16	16213264	16213837	+	0	NA	exon (NM_026163, exon 1 of 13)	exon (NM_026163, exon 1 of 13)	112	NM_026163	67451	Mm.2252	NM_026163	ENSMUSG00000041957	Pkp2	1200008D14Rik|1200012P04Rik|AA516617|Pkp2l	plakophilin 2	protein-coding
unique_peak2-36864-7-14--1.10779976531033-0.817533494790411	chr3	90585318	90585847	+	0	NA	Intergenic	L1VL4|LINE|L1	54754	NM_207263	384997	Mm.316644	NM_207263	ENSMUSG00000042250	Pglyrp4	Gm1478|Gm413	peptidoglycan recognition protein 4	protein-coding
unique_peak2-36823-7-11--0.785871670422967-1.21681515183528	chr3	88177030	88177491	+	0	NA	Intergenic	Intergenic	-3618	NM_031368	12095	Mm.482191	NM_031368	ENSMUSG00000074489	Bglap3	AI461847|Bglap-rs1|ORG|mOC-X	bone gamma-carboxyglutamate protein 3	protein-coding
common_peak2-31523-29-64--0.910077732413344-2.17301518846909	chr8	109705465	109706358	+	0	NA	intron (NM_025558, intron 4 of 4)	intron (NM_025558, intron 4 of 4)	31350	NM_025558	66427	Mm.20242	NM_025558	ENSMUSG00000031924	Cyb5b	1810044O22Rik|AU015618|Cyb5m	cytochrome b5 type B	protein-coding
common_peak2-29283-26-23-0.342936591437306-0.502376547007663	chr5	143328679	143329646	+	0	NA	intron (NM_001122730, intron 16 of 18)	intron (NM_001122730, intron 16 of 18)	-39928	NM_009362	21784	Mm.2854	NM_009362	ENSMUSG00000024032	Tff1	Bcei|PS2	trefoil factor 1	protein-coding
common_peak1-19068-30-44--0.322177686837802-0.475038482441584	chr9	69989264	69990242	+	0	NA	promoter-TSS (NM_029784)	promoter-TSS (NM_029784)	-389	NM_029784	76886	Mm.44355	NM_029784	ENSMUSG00000032224	Fam81a	6430514L14Rik	family with sequence similarity 81, member A	protein-coding
unique_peak2-38111-3-5--0.998945590680433-0.96108193396963	chr6	72416280	72416670	+	0	NA	Intergenic	Intergenic	-26923	NM_145569	232087	Mm.29815	NM_145569	ENSMUSG00000053907	Mat2a	D630045P18Rik	methionine adenosyltransferase II, alpha	protein-coding
common_peak2-29508-13-15--0.221527969362231-0.308519316180257	chr6	34475641	34476274	+	0	NA	Intergenic	Intergenic	49601	NM_007563	12183	Mm.282863	NM_007563	ENSMUSG00000038871	Bpgm	AI323730|AL022789|C86192	2,3-bisphosphoglycerate mutase	protein-coding
common_peak1-16294-13-20--0.613845392140992-0.532159081577619	chr5	113157057	113157640	+	0	NA	intron (NM_028901, intron 39 of 43)	intron (NM_028901, intron 39 of 43)	-64964	NR_040675	67360	Mm.59218	NR_040675	ENSMUSG00000098230	1700095B10Rik	-	RIKEN cDNA 1700095B10 gene	ncRNA
common_peak1-16920-36-24-0.83546489639303-1.71114535657705	chr6	73247968	73249111	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	50040	NM_019879	56451	Mm.29845	NM_019879	ENSMUSG00000052738	Suclg1	1500000I01Rik|Sucla1	succinate-CoA ligase, GDP-forming, alpha subunit	protein-coding
common_peak1-15622-10-8-0.186490343566457-1.078512453669	chr4	133406699	133407247	+	0	NA	intron (NM_009097, intron 18 of 21)	intron (NM_009097, intron 18 of 21)	23673	NM_001285506	20111	Mm.301827	NM_009097	ENSMUSG00000003644	Rps6ka1	Mapkapk-1a|Rsk|Rsk-1|Rsk1|S6K-alpha-1|p90-Rsk1|p90Rsk1|p90S6K|p90rsk	ribosomal protein S6 kinase polypeptide 1	protein-coding
common_peak2-32082-69-100--0.0630690354930623-0.310950811460187	chr9	96630721	96631806	+	0	NA	TTS (NR_015511)	TTS (NR_015511)	831	NM_175537	245007	Mm.485954	NM_175537	ENSMUSG00000040433	Zbtb38	A930014K01Rik|CIBZ	zinc finger and BTB domain containing 38	protein-coding
common_peak1-9467-106-106-0.596299868604572-2.86079810786734	chr11	104441108	104443205	+	0	NA	intron (NM_010858, intron 4 of 8)	intron (NM_010858, intron 4 of 8)	-27158	NM_016780	16416	Mm.87150	NM_016780	ENSMUSG00000020689	Itgb3	CD61|GP3A|INGRB3	integrin beta 3	protein-coding
unique_peak2-34979-3-10--1.87341470859657-1.75805390616669	chr15	98934101	98934440	+	0	NA	intron (NM_176835, intron 2 of 2)	B2_Mm2|SINE|B2	4355	NM_176835	72778	Mm.30544	NM_176835	ENSMUSG00000038009	Dnajc22	2810451A06Rik|AI506245	DnaJ (Hsp40) homolog, subfamily C, member 22	protein-coding
unique_peak2-36869-7-9--0.522837264589173-1.05908390183068	chr3	92689323	92689747	+	0	NA	Intergenic	Intergenic	-15408	NM_025621	66533	Mm.144259	NM_025621	ENSMUSG00000090314	2310050C09Rik	-	RIKEN cDNA 2310050C09 gene	protein-coding
common_peak1-7903-21-30--0.384707045120639-0.446094173747089	chr1	135731275	135732204	+	0	NA	Intergenic	Intergenic	72011	NM_054076	269120	Mm.59985	NM_054076	ENSMUSG00000010311	Optc	-	opticin	protein-coding
unique_peak2-39815-11-26--1.24619391791185-1.66030262873422	chrX	36795630	36796480	+	0	NA	Intergenic	L1Md_F2|LINE|L1	96612	NM_001177380	78631	Mm.243738	NM_001177380	ENSMUSG00000079619	Cypt15	1700085A12Rik	cysteine-rich perinuclear theca 15	protein-coding
common_peak1-16509-13-9-0.456543935750406-0.53895475198017	chr5	139826500	139827078	+	0	NA	Intergenic	PB1D10|SINE|Alu	-1782	NM_001160265	545817	Mm.482474	NM_001160265	ENSMUSG00000029541	Cyp2w1	Gm455	cytochrome P450, family 2, subfamily w, polypeptide 1	protein-coding
unique_peak1-2324-13-7-0.778472030637769-0.817533494790411	chr15	83339044	83339740	+	0	NA	intron (NM_178869, intron 1 of 11)	intron (NM_178869, intron 1 of 11)	1945	NM_178869	319953	Mm.235007	NM_178869	ENSMUSG00000022442	Ttll1	6330444E16Rik|AV014541	tubulin tyrosine ligase-like 1	protein-coding
unique_peak2-37990-4-11--1.6084230145744-1.68134727924692	chr6	21851570	21852179	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-47741	NM_023626	71777	Mm.39999	NM_023626	ENSMUSG00000029670	Ing3	1300013A07Rik|P47ING3	inhibitor of growth family, member 3	protein-coding
unique_peak1-6935-8-8--0.164702583494742-1.00793137938329	chr8	107504947	107505451	+	0	NA	Intergenic	Intergenic	-19554	NM_001272045	436059	Mm.491825	NM_001272045	ENSMUSG00000091813	Ces2h	Ces2|EG436059|Gm5744	carboxylesterase 2H	protein-coding
common_peak2-24712-27-35--0.178379050547076-0.330208782692001	chr17	46383644	46384505	+	0	NA	promoter-TSS (NM_145353)	promoter-TSS (NM_145353)	920	NM_009085	20016	Mm.3458	NM_009085	ENSMUSG00000067148	Polr1c	40kDa|AA409007|AA959927|AL024089|Polr1e|RPA40|Rpo1-1	polymerase (RNA) I polypeptide C	protein-coding
unique_peak2-34538-7-13--1.00826409175941-0.697979855752659	chr14	55814897	55815480	+	0	NA	Intergenic	Intergenic	-25656	NM_027790	71412	Mm.85484	NM_027790	ENSMUSG00000022209	Dhrs2	5430405K24Rik|Hep27	dehydrogenase/reductase member 2	protein-coding
common_peak1-18008-13-36--1.43098133499118-2.47671208917977	chr7	141168085	141168794	+	0	NA	intron (NM_007400, intron 6 of 22)	intron (NM_007400, intron 6 of 22)	-193971	NM_001286031	101437	Mm.199223	NM_133941	ENSMUSG00000030986	Dhx32	3110079L04Rik|4732469F02Rik|AA408140|Ddx32	DEAH (Asp-Glu-Ala-His) box polypeptide 32	protein-coding
common_peak2-22981-24-41--0.599107520011044-0.83607543869935	chr14	55559966	55560810	+	0	NA	TTS (NM_001164171)	TTS (NM_001164171)	5054	NM_029390	67272	Mm.41614	NM_026066	ENSMUSG00000040759	Cmtm5	1500005P16Rik|2900052H21Rik|Cklfsf5	CKLF-like MARVEL transmembrane domain containing 5	protein-coding
common_peak2-22293-13-23--0.806490470083387-0.781208772652439	chr13	14613262	14614122	+	0	NA	intron (NM_001081348, intron 1 of 28)	intron (NM_001081348, intron 1 of 28)	1801	NM_001081348	94253	Mm.125298	NM_153130	ENSMUSG00000021301	Hecw1	9330116H24Rik|AV273951|E130207I19Rik|Nedl1	HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	protein-coding
common_peak2-22831-22-41--0.745033317691356-1.15174830603352	chr14	20640920	20641686	+	0	NA	intron (NM_026528, intron 2 of 7)	ORR1D1|LTR|MaLR	1742	NM_026528	68045	Mm.21932	NM_026528	ENSMUSG00000021807	2700060E02Rik	-	RIKEN cDNA 2700060E02 gene	protein-coding
common_peak2-30155-30-52--0.558245045071326-0.936258361511353	chr6	146724328	146725725	+	0	NA	3' UTR (NM_172734, exon 14 of 14)	3' UTR (NM_172734, exon 14 of 14)	-29026	NM_172309	272322	Mm.333500	NM_172309	ENSMUSG00000040187	Arntl2	4632430A05Rik|BMAL2|CLIF|MOP9|bHLHe6	aryl hydrocarbon receptor nuclear translocator-like 2	protein-coding
unique_peak2-33890-7-22--1.72447112575882-2.07034318903805	chr12	40037551	40038235	+	0	NA	Intergenic	RMER4B|LTR|ERVK	527595	NM_001163154	14009	Mm.4866	NM_007960	ENSMUSG00000004151	Etv1	ER81|Etsrp81	ets variant 1	protein-coding
common_peak1-9700-24-27--0.0141450192898871-0.304978344874324	chr12	24830832	24831615	+	0	NA	Intergenic	Intergenic	-49089	NM_001256489	66808	Mm.379124	NM_001256489		9030624G23Rik	-	RIKEN cDNA 9030624G23 gene	protein-coding
unique_peak1-3884-8-2-1.42025991722641-1.65811743852845	chr2	14277105	14277596	+	0	NA	Intergenic	Lx2|LINE|L1	-32675	NM_001012305	277468	Mm.44662	NM_001012305	ENSMUSG00000036949	Slc39a12	AW046938|Gm731	solute carrier family 39 (zinc transporter), member 12	protein-coding
common_peak2-28524-25-63--1.13815009465489-3.09530603560454	chr5	111246822	111248686	+	0	NA	Intergenic	Intergenic	-8654	NM_009469	22241	Mm.271898	NM_009469	ENSMUSG00000029512	Ulk1	AU041434|Unc51.1|mKIAA0722	unc-51 like kinase 1	protein-coding
common_peak2-20824-13-12-0.0780323124966764-0.334470287753051	chr10	128410804	128411383	+	0	NA	Intergenic	B3A|SINE|B2	-13049	NM_027853	71664	Mm.337232	NM_027853	ENSMUSG00000025347	Mettl7b	0610006F02Rik|AI266817	methyltransferase like 7B	protein-coding
unique_peak1-5361-8-0-3.00522241794757-2.70926996097583	chr5	92832516	92833051	+	0	NA	intron (NM_181728, intron 6 of 9)	intron (NM_181728, intron 6 of 9)	31442	NM_183392	269113	Mm.275289	NM_183392	ENSMUSG00000034826	Nup54	3110079L04Rik|54kDa	nucleoporin 54	protein-coding
common_peak2-20308-20-40--0.869477220026891-1.45230360914611	chr10	25296333	25297536	+	0	NA	Intergenic	Intergenic	-40856	NM_001195596	100504474	Mm.46323	NM_001195596	ENSMUSG00000096546	Smlr1	2010003K15Rik	small leucine-rich protein 1	protein-coding
common_peak1-16605-14-28--0.958764834769927-1.16796998271031	chr5	150611780	150612490	+	0	NA	intron (NR_077242, intron 1 of 4)	RLTR13D2|LTR|ERVK	2191	NR_077242	100861794	Mm.402054	NR_077242		Gm21221	-	predicted gene, 21221	ncRNA
common_peak1-18395-11-15--0.491306415748387-0.435191258261915	chr8	71611014	71611521	+	0	NA	intron (NM_153054, intron 1 of 16)	B2_Mm2|SINE|B2	-1368	NM_007509	11966	Mm.249096	NM_007509	ENSMUSG00000006273	Atp6v1b2	AI194269|AI790362|Atp6b2|HO57|R74844	ATPase, H+ transporting, lysosomal V1 subunit B2	protein-coding
common_peak2-24554-12-9-0.326847890200276-0.459837087125828	chr17	28350020	28350623	+	0	NA	intron (NM_027185, intron 1 of 10)	B3|SINE|B2	5598	NM_027185	23853	Mm.204731	NM_027185	ENSMUSG00000002257	Def6	2410003F05Rik|6430538D02Rik|AV094905|Ibp|Slat|Slat2|Slat6	differentially expressed in FDCP 6	protein-coding
common_peak1-8965-11-17--0.661231417190699-0.58239619684445	chr11	57801608	57802124	+	0	NA	Intergenic	Intergenic	-20700	NM_028451	73158	Mm.248843	NM_028451	ENSMUSG00000037331	Larp1	1810024J12Rik|3110040D16Rik|Larp|mKIAA0731	La ribonucleoprotein domain family, member 1	protein-coding
common_peak2-31279-56-108--0.532588499337683-1.60033012847202	chr8	71922303	71923684	+	0	NA	Intergenic	Intergenic	-3550	NR_038043	378466	Mm.37846	NM_194351		Gm10033	9330175B10Rik|ENSMUSG00000057924|ENSMUSG00000071083|Gm10311	predicted gene 10033	ncRNA
common_peak1-14321-9-11--0.395349094316936-0.344532117358383	chr2	163574052	163574488	+	0	NA	intron (NM_001272052, intron 1 of 11)	intron (NM_001272052, intron 1 of 11)	1705	NM_007398	11486	Mm.388	NM_007398	ENSMUSG00000017697	Ada	-	adenosine deaminase	protein-coding
common_peak1-10411-14-11-0.314253659636488-0.435191258261915	chr13	98390820	98391445	+	0	NA	Intergenic	Intergenic	61177	NR_046157	328314	Mm.138047	NR_046157		Gm5086	B230311A21|EG328314	predicted gene 5086	ncRNA
common_peak1-7935-32-45--0.244469936837353-0.394172396164276	chr1	151428550	151429629	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	379325	NM_008869	18783	Mm.4186	NM_008869	ENSMUSG00000056220	Pla2g4a	Pla2g4|cPLA2|cPLA2alpha	phospholipase A2, group IVA (cytosolic, calcium-dependent)	protein-coding
common_peak1-11759-24-12-1.09277018462662-1.73042999925837	chr16	38282126	38283080	+	0	NA	intron (NM_001098404, intron 1 of 8)	HAL1-3A_ME|LINE|L1	12307	NM_010936	18171	Mm.8509	NM_010936	ENSMUSG00000022809	Nr1i2	PXR|PXR.1|PXR.2|PXR1|SXR|mPXR	nuclear receptor subfamily 1, group I, member 2	protein-coding
unique_peak2-39155-4-5--0.608423014574403-0.909929411522249	chr8	89812701	89813122	+	0	NA	Intergenic	Intergenic	-89162	NR_040697	100038706	Mm.334690	NR_040697	ENSMUSG00000099207	Gm10637	ENSMUSG00000074176	predicted gene 10637	ncRNA
unique_peak2-32887-3-4--0.73591118484664-0.864171920961574	chr10	12887977	12888311	+	0	NA	intron (NM_029172, intron 3 of 5)	B1F|SINE|Alu	9685	NM_029172	75122	Mm.159433	NM_029172	ENSMUSG00000019815	Zc2hc1b	4930519B02Rik|Fam164b	zinc finger, C2HC-type containing 1B	protein-coding
common_peak2-27323-51-57-0.216942830475001-0.476339052167849	chr3	66985624	66986371	+	0	NA	intron (NM_025822, intron 5 of 9)	intron (NM_025822, intron 5 of 9)	-192022	NM_010801	17349	Mm.10414	NM_010801	ENSMUSG00000048416	Mlf1	HLS7	myeloid leukemia factor 1	protein-coding
unique_peak2-37690-6-7--0.434601889619698-0.97990265578305	chr5	99380359	99380845	+	0	NA	intron (NM_008926, intron 14 of 18)	intron (NM_008926, intron 14 of 18)	85496	NM_008926	19092	Mm.263002	NM_008926	ENSMUSG00000029334	Prkg2	AW212535|CGKII|Prkgr2|cGK-II	protein kinase, cGMP-dependent, type II	protein-coding
common_peak2-30218-41-29-0.794258109240142-1.7388889233551	chr7	135610000	135610797	+	0	NA	Intergenic	MT2B|LTR|ERVL	-5371	NM_009383	21843	Mm.242072	NM_009383	ENSMUSG00000030846	Tial1	5330433G13Rik|AL033329|TIAR|mTIAR	Tia1 cytotoxic granule-associated RNA binding protein-like 1	protein-coding
common_peak2-29974-7-4-0.477162735410827-1.09384600808989	chr6	120114896	120115234	+	0	NA	intron (NM_016718, intron 1 of 3)	intron (NM_016718, intron 1 of 3)	71667	NM_016718	29862	Mm.103668	NM_016718	ENSMUSG00000041377	Ninj2	-	ninjurin 2	protein-coding
common_peak1-14944-12-9-0.326847890200276-0.459837087125828	chr3	103259547	103260221	+	0	NA	Intergenic	Lx8|LINE|L1	-119321	NM_001276679	54524	Mm.88818	NM_018800	ENSMUSG00000027849	Syt6	3110037A08Rik|AW048930|sytVI	synaptotagmin VI	protein-coding
common_peak1-19013-15-14-0.105274154947137-0.330004445983672	chr9	62811200	62811937	+	0	NA	intron (NM_019663, intron 1 of 13)	intron (NM_019663, intron 1 of 13)	17118	NM_019663	56469	Mm.431253	NM_019663	ENSMUSG00000032405	Pias1	2900068C24Rik|Ddxbp1|GBP	protein inhibitor of activated STAT 1	protein-coding
common_peak1-15072-15-16--0.075298090694683-0.301029995663976	chr3	126692720	126693591	+	0	NA	intron (NM_178655, intron 2 of 24)	intron (NM_178655, intron 2 of 24)	8215	NM_178655	109676	Mm.220242	NM_178655	ENSMUSG00000032826	Ank2	AI835472|AW491075|Ank-2	ankyrin 2, brain	protein-coding
common_peak2-29612-9-8-0.0196884049619079-1.03275496310833	chr6	54130538	54131003	+	0	NA	intron (NM_001163640, intron 2 of 12)	MER5B|DNA|MER1_type	-92046	NM_023543	69993	Mm.321147	NM_023543	ENSMUSG00000004633	Chn2	1700026N20Rik|4930557O16Rik|ARHGAP3|Bch	chimerin 2	protein-coding
unique_peak1-1545-21-0-4.56948926526624-NA	chr13	21914034	21915141	+	0	NA	Intergenic	Intergenic	9440	NM_175657	319161	Mm.261664	NM_175657		Hist1h4n	-	histone cluster 1, H4n	protein-coding
common_peak1-15466-15-14-0.105274154947137-0.330004445983672	chr4	103263330	103264004	+	0	NA	Intergenic	L1Md_T|LINE|L1	208562	NR_040673	622167	Mm.244115	NR_040673	ENSMUSG00000086136	Gm12718	OTTMUSG00000008109	predicted gene 12718	ncRNA
common_peak1-15687-68-110--0.22445508705181-0.53957546019573	chr4	138972367	138973990	+	0	NA	exon (NM_001160319, exon 32 of 106)	exon (NM_001160319, exon 32 of 106)	36604	NM_001160319	69116	Mm.271956	NM_001160319	ENSMUSG00000066036	Ubr4	1810009A16Rik|A930005E13Rik|D930005K06Rik|Gm1032|Gm1666|N28143|RBAF600|Zubr1|mKIAA0462|p600	ubiquitin protein ligase E3 component n-recognin 4	protein-coding
common_peak1-8708-10-10--0.103016273628528-0.301029995663987	chr11	95076093	95076729	+	0	NA	Intergenic	PB1D10|SINE|Alu	-46432	NM_053093	93670	Mm.40085	NM_053093	ENSMUSG00000020872	Tac4	AW489379|PPT-C	tachykinin 4	protein-coding
common_peak1-12862-46-35-0.728070941806489-1.74659365657991	chr18	75457026	75458587	+	0	NA	promoter-TSS (NR_045393)	promoter-TSS (NR_045393)	-823	NR_045393	100503117	Mm.250517	NR_045393		2010010A06Rik	5033420E22Rik	RIKEN cDNA 2010010A06 gene	ncRNA
common_peak2-21912-53-52-0.41305255785273-0.940907383351645	chr12	9029894	9030804	+	0	NA	intron (NM_001159527, intron 23 of 26)	B1_Mus2|SINE|Alu	-6454	NM_029321	75516	Mm.37581	NM_029321	ENSMUSG00000066637	Ttc32	1700013G20Rik	tetratricopeptide repeat domain 32	protein-coding
unique_peak1-1546-21-11-0.984526764545079-1.3750876294627	chr13	23401523	23402529	+	0	NA	Intergenic	Intergenic	31807	NR_046038	74061	Mm.399501	NR_046038	ENSMUSG00000085122	4933404K08Rik	-	RIKEN cDNA 4933404K08 gene	ncRNA
common_peak2-22657-81-157--0.431731145168538-1.57358584735914	chr13	95324450	95326421	+	0	NA	intron (NM_009680, intron 26 of 26)	MERVL-int|LTR|ERVL	196520	NM_009680	11774	Mm.21185	NM_009680	ENSMUSG00000021686	Ap3b1	AP-3|AU015684|C78395|Hps2|beta3A|pe|pearl|rim2	adaptor-related protein complex 3, beta 1 subunit	protein-coding
common_peak2-30700-95-97-0.533205500908806-2.15190375897031	chr7	112022598	112024320	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	-5764	NM_146814	258810	Mm.377700	NM_146814	ENSMUSG00000073917	Olfr665	MOR34-7	olfactory receptor 665	protein-coding
unique_peak1-7323-8-3-1.00522241794757-1.39487600375387	chr9	121079581	121080036	+	0	NA	intron (NM_177589, intron 21 of 36)	HAL1|LINE|L1	106482	NM_177589	209012	Mm.371804	NM_177589	ENSMUSG00000040936	Ulk4	4932415A06Rik|A730098P15	unc-51-like kinase 4	protein-coding
common_peak1-11501-53-58-0.258329963054087-0.585993193419137	chr15	103239575	103241215	+	0	NA	intron (NM_028797, intron 6 of 8)	B1_Mur3|SINE|Alu	20463	NM_028797	74174	Mm.325325	NM_028797	ENSMUSG00000022487	Gtsf1	1700006H03Rik|Cue110	gametocyte specific factor 1	protein-coding
common_peak1-16469-21-8-1.39956426382392-2.11898024768848	chr5	137078226	137079236	+	0	NA	Intergenic	RSINE1|SINE|B4	-35371	NM_001291238	13047	Mm.320317	NM_009986	ENSMUSG00000029705	Cux1	CDP|Cutl1|Cux|Cux-1	cut-like homeobox 1	protein-coding
common_peak2-28069-31-29-0.318348075204605-0.512115693271959	chr4	66829019	66830041	+	0	NA	Intergenic	Intergenic	340685	NM_021297	21898	Mm.38049	NM_021297	ENSMUSG00000039005	Tlr4	Lps|Ly87|Ran/M1|Rasl2-8	toll-like receptor 4	protein-coding
unique_peak2-37357-2-7--1.91745425626332-1.45399745587252	chr4	134516965	134517363	+	0	NA	Intergenic	MER63D|DNA|AcHobo	30269	NM_026780	68592	Mm.29989	NM_026780	ENSMUSG00000028821	Syf2	1110018L13Rik|Cbpin|D4Bwg1551e|Gcipip|Ntc31|mp29|p29	SYF2 homolog, RNA splicing factor (S. cerevisiae)	protein-coding
common_peak2-23213-20-11-0.903112283870037-1.11267835143409	chr15	3251170	3251649	+	0	NA	intron (NM_001166063, intron 1 of 8)	intron (NM_001166063, intron 1 of 8)	2117	NM_001166063	100039139	Mm.455610	NM_001166063	ENSMUSG00000091119	Ccdc152	ENSMUSG00000071814	coiled-coil domain containing 152	protein-coding
common_peak2-19903-30-36--0.039777956137077-0.301029995663973	chr1	118310793	118311640	+	0	NA	intron (NM_001077425, intron 14 of 23)	RMER15|LTR|ERVL	729502	NM_001077425	636808	Mm.101576	NM_001077425	ENSMUSG00000070695	Cntnap5a	Caspr5-1|EG636808	contactin associated protein-like 5A	protein-coding
common_peak1-12362-23-15-0.721767504509081-0.949797625454541	chr17	62686997	62688014	+	0	NA	Intergenic	Intergenic	543161	NM_207654	13640	Mm.7978	NM_010109		Efna5	AL-1|AV158822|EFL-5|Ephrin-A5|Epl7|LERK-7|RAGS	ephrin A5	protein-coding
common_peak1-14333-30-25-0.469235691350781-0.734130039933318	chr2	164454771	164456115	+	0	NA	Intergenic	RMER3D-int|LTR|ERVK	8859	NM_001012723	277345	Mm.247244	NM_001012723	ENSMUSG00000070530	Wfdc16	BC043944|WAP16	WAP four-disulfide core domain 16	protein-coding
common_peak2-31294-7-9--0.522837264589173-1.05908390183068	chr8	73134550	73135010	+	0	NA	Intergenic	Intergenic	-2567	NM_133772	76900	Mm.6667	NM_133772	ENSMUSG00000070003	Ssbp4	1210002E11Rik|AW743380|Sspb4	single stranded DNA binding protein 4	protein-coding
unique_peak2-38931-2-7--1.91745425626332-1.45399745587252	chr8	22882391	22882791	+	0	NA	Intergenic	RSINE1|SINE|B4	-4436	NM_007843	13214	Mm.431316	NM_007843	ENSMUSG00000044748	Defb1	AW260221|BD-1	defensin beta 1	protein-coding
common_peak2-20598-10-10--0.103016273628528-0.301029995663987	chr10	79852371	79852933	+	0	NA	Intergenic	B3|SINE|B2	-2256	NM_198615	237400	Mm.268389	NM_198615	ENSMUSG00000048696	Mex3d	BC059858|Rkhd1	mex3 homolog D (C. elegans)	protein-coding
common_peak2-26987-7-5-0.214128329577033-1.01466476204226	chr2	168072165	168072513	+	0	NA	Intergenic	MER74A|LTR|ERVL	16217	NM_001160330	69372	Mm.482182	NM_001160330	ENSMUSG00000074576	Mocs3	1700020H17Rik|Uba4	molybdenum cofactor synthesis 3	protein-coding
unique_peak1-6465-8-2-1.42025991722641-1.65811743852845	chr7	104216263	104216785	+	0	NA	Intergenic	Intergenic	-13737	NM_001162477	14389	Mm.42033	NM_010248	ENSMUSG00000004508	Gab2	AI463667|D130058I17Rik|p97	growth factor receptor bound protein 2-associated protein 2	protein-coding
unique_peak1-5387-8-5-0.420259917226415-1.10484139239135	chr5	100625711	100626244	+	0	NA	Intergenic	Intergenic	-13734	NR_040679	69571	Mm.396412	NR_040679		2310034O05Rik	-	RIKEN cDNA 2310034O05 gene	ncRNA
unique_peak1-5304-11-2-1.92373108353046-2.32232533660526	chr5	74794487	74795186	+	0	NA	intron (NM_001286437, intron 4 of 7)	B3|SINE|B2	132931	NM_178672	212986	Mm.134147	NM_178672	ENSMUSG00000062110	Scfd2	E430013M20Rik|STXBP1L1	Sec1 family domain containing 2	protein-coding
common_peak1-12213-65-99--0.151690250297597-0.394128302109923	chr17	34031039	34032717	+	0	NA	Intergenic	ORR1A2-int|LTR|MaLR	-4300	NM_001195298	100502766	Mm.335713	NM_001195298	ENSMUSG00000079553	Kifc1	100042970|Gm4137|HSET|KNSL2|Kifc5a|Knsl2a|Tctex-7|Tctex-7A|Tctex7|Tctex7a	kinesin family member C1	protein-coding
common_peak2-29988-11-11--0.0762689164695427-0.301029995663976	chr6	122601977	122602586	+	0	NA	Intergenic	Intergenic	25839	NM_139218	73708	Mm.27982	NM_139218	ENSMUSG00000046323	Dppa3	2410075G02Rik|PCG7|PGC7|Stella	developmental pluripotency-associated 3	protein-coding
common_peak2-21063-91-126-0.0847472588301725-0.368433880310474	chr11	48870683	48873120	+	0	NA	3' UTR (NM_001145164, exon 2 of 2).2	3' UTR (NM_001145164, exon 2 of 2).2	5813	NM_001145164	100039796	Mm.482363	NM_001145164	ENSMUSG00000078921	Tgtp2	OTTMUSG00000005537	T cell specific GTPase 2	protein-coding
common_peak1-18329-20-21-0.0286431659538957-0.306080386793804	chr8	60992814	60993707	+	0	NA	intron (NM_175032, intron 2 of 11)	intron (NM_175032, intron 2 of 11)	186333	NM_001177534	100271928	Mm.484123	NM_001177534		Gm15881	OTTMUSG00000027193	predicted gene 15881	protein-coding
common_peak1-14926-56-95--0.349366675281913-0.813149881052206	chr3	101109426	101110966	+	0	NA	Intergenic	Intergenic	-18334	NM_013486	12481	Mm.22842	NM_013486	ENSMUSG00000027863	Cd2	LFA-2|Ly-37|Ly37	CD2 antigen	protein-coding
common_peak1-17171-7-11--0.785871670422967-1.21681515183528	chr6	120463058	120463505	+	0	NA	intron (NM_144815, intron 6 of 7)	intron (NM_144815, intron 6 of 7)	18036	NM_144815	214932	Mm.255322	NM_144815	ENSMUSG00000058979	Cecr5	A930002G03Rik	cat eye syndrome chromosome region, candidate 5	protein-coding
common_peak1-9415-10-12--0.344024373132323-0.340565874754526	chr11	101070022	101070657	+	0	NA	intron (NM_007970, intron 8 of 20)	B2_Mm2|SINE|B2	17425	NM_007970	14055	Mm.5027	NM_007970	ENSMUSG00000006920	Ezh1	AW557915|mKIAA0388	enhancer of zeste homolog 1 (Drosophila)	protein-coding
unique_peak2-37874-2-6--1.72480917832092-1.26211192963361	chr5	138170748	138171114	+	0	NA	Intergenic	Intergenic	10295	NM_175521	243300	Mm.74750	NM_175521	ENSMUSG00000045348	Nyap1	6430598A04Rik	neuronal tyrosine-phosphorylated phosphoinositide 3-kinase adaptor 1	protein-coding
common_peak2-24087-41-43-0.241717086211363-0.486454540233427	chr16	31598115	31599155	+	0	NA	Intergenic	Intergenic	-64894	NM_001252435	13383	Mm.382	NM_007862	ENSMUSG00000022770	Dlg1	B130052P05Rik|Dlgh1|E-dlg/SAP97|SAP-97|SAP97|mKIAA4187	discs, large homolog 1 (Drosophila)	protein-coding
common_peak1-8137-16-11-0.533301141546906-0.58239619684445	chr1	190911362	190912137	+	0	NA	Intergenic	Intergenic	-80030	NM_172650	226823	Mm.209880	NM_172650	ENSMUSG00000026608	Kctd3	4930438A20Rik|9330185B06|E330032J19Rik|NY-REN-45	potassium channel tetramerisation domain containing 3	protein-coding
unique_peak1-1936-8-0-3.00522241794757-2.70926996097583	chr14	78318502	78319007	+	0	NA	intron (NM_178825, intron 1 of 6)	intron (NM_178825, intron 1 of 6)	14708	NM_029495	108670	Mm.68134	NM_029495	ENSMUSG00000022014	Epsti1	2310046K10Rik|5033415K03Rik|BRESI1	epithelial stromal interaction 1 (breast)	protein-coding
common_peak1-15980-40-82--0.716063748595826-1.88456604681059	chr5	32132703	32133919	+	0	NA	intron (NM_181281, intron 4 of 10)	intron (NM_181281, intron 4 of 10)	132888	NM_181282	107976	Mm.482126	NM_144541	ENSMUSG00000052139	Bre	6030405P19Rik|AI429776|B830038C02Rik	brain and reproductive organ-expressed protein	protein-coding
common_peak2-23717-9-13--0.617741515653384-0.459837087125828	chr15	89476233	89476668	+	0	NA	Intergenic	(CCA)n|Simple_repeat|Simple_repeat	-54096	NM_026817	68708	Mm.23258	NM_026817	ENSMUSG00000022621	Rabl2	1110031N17Rik|AW549303|Rabl2a	RAB, member RAS oncogene family-like 2	protein-coding
common_peak1-18084-8-13--0.802132504110034-0.562038191119711	chr8	84065952	84066386	+	0	NA	intron (NM_001297596, intron 2 of 24)	intron (NM_001297596, intron 2 of 24)	199708	NM_001297593	234515	Mm.324468	NM_001024617	ENSMUSG00000037940	Inpp4b	E130107I17Rik	inositol polyphosphate-4-phosphatase, type II	protein-coding
unique_peak1-1122-9-1-2.18961340640422-2.31132995230379	chr11	94948879	94949448	+	0	NA	Intergenic	Intergenic	-11135	NM_013565	16400	Mm.57035	NM_013565	ENSMUSG00000001507	Itga3	AA407068|CD49C|GAPB3	integrin alpha 3	protein-coding
common_peak1-19258-19-12-0.702247608520594-0.840839978588874	chr9	110781396	110782171	+	0	NA	promoter-TSS (NM_001146059)	promoter-TSS (NM_001146059)	804	NM_146260	20776	Mm.390229	NM_146260	ENSMUSG00000049555	Tmie	5131400L21Rik|Mm.87012|sr	transmembrane inner ear	protein-coding
common_peak2-29358-40-78--0.644805065426005-1.53728479856666	chr5	150664707	150665758	+	0	NA	intron (NR_045758, intron 3 of 3)	intron (NR_045758, intron 3 of 3)	14910	NR_045758	70969	Mm.78499	NR_045758		4930500F04Rik	4931407C17Rik	RIKEN cDNA 4930500F04 gene	ncRNA
common_peak2-27555-44-115--1.03608816055904-4.63241479576775	chr3	96575311	96577816	+	0	NA	intron (NM_026406, intron 3 of 8)	L1MB7|LINE|L1	41881	NM_018767	54215	Mm.34693	NM_018767	ENSMUSG00000038304	Cd160	AU045688|By55	CD160 antigen	protein-coding
common_peak2-27212-18-16-0.225456309978012-0.397739447719379	chr3	41408732	41409243	+	0	NA	intron (NM_001130185, intron 9 of 10)	intron (NM_001130185, intron 9 of 10)	40185	NM_001130186	269424	Mm.286285	NM_172303	ENSMUSG00000025764	Jade1	AU041499|D530048A03Rik|Phf17|mKIAA1807	jade family PHD finger 1	protein-coding
common_peak2-22020-47-68--0.173683032011621-0.383552807395299	chr12	57545255	57547454	+	0	NA	Intergenic	MLT1H1|LTR|MaLR	84053	NR_045082	104798	Mm.310950	NR_045082		E030019B13Rik	AI413669	RIKEN cDNA E030019B13 gene	ncRNA
common_peak2-21420-10-8-0.186490343566457-1.078512453669	chr11	84179851	84180259	+	0	NA	intron (NM_133360, intron 45 of 53)	intron (NM_133360, intron 45 of 53)	146948	NM_019816	56321	Mm.257482	NM_019816	ENSMUSG00000018697	Aatf	4933415H02Rik|5830465M17Rik|Che-1|Trb	apoptosis antagonizing transcription factor	protein-coding
common_peak1-12577-17-35--0.951628663237274-1.34608670144205	chr18	12128684	12129412	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-130101	NR_035447	100316686		NR_035447	miRBase:MI0008328	Mir1901	Mirn1901|mmu-mir-1901	microRNA 1901	ncRNA
unique_peak2-36139-3-12--2.11442280810037-2.15846853396659	chr2	17742070	17742655	+	0	NA	Intergenic	Intergenic	-89667	NM_028757	74103	Mm.120298	NM_028757	ENSMUSG00000053702	Nebl	1200007O21Rik|A630080F05Rik|BB140644|D830029A09Rik|Lnebl	nebulette	protein-coding
common_peak2-31527-24-41--0.599107520011044-0.83607543869935	chr8	109868498	109869496	+	0	NA	intron (NM_001286260, intron 4 of 12)	RSINE1|SINE|B4	51627	NM_133957	54446	Mm.390057	NM_018823	ENSMUSG00000003847	Nfat5	AI225870|B130038B15Rik|CAG-8|CAG80|NFATL1|OREBP|TonEBP|mKIAA0827|nfatz	nuclear factor of activated T cells 5	protein-coding
common_peak2-24251-9-14--0.717277189204299-0.53895475198017	chr16	92163901	92164448	+	0	NA	Intergenic	Intergenic	105593	NM_080456	121022	Mm.217354	NM_080456	ENSMUSG00000039680	Mrps6	AW046321	mitochondrial ribosomal protein S6	protein-coding
common_peak1-12435-13-14--0.12841856497075-0.301029995663977	chr17	78736029	78736614	+	0	NA	intron (NM_015800, intron 8 of 16)	intron (NM_015800, intron 8 of 16)	81171	NM_001285949	225020	Mm.236835	NM_199448	ENSMUSG00000056121	Fez2	9030616F16|D17Ertd315e	fasciculation and elongation protein zeta 2 (zygin II)	protein-coding
common_peak2-28563-27-58--0.891097098466606-1.95552668877042	chr5	5513914	5515003	+	0	NA	intron (NM_001193660, intron 1 of 4)	CpG	331	NM_001193660	64945	Mm.40132	NM_022890	ENSMUSG00000046798	Cldn12	-	claudin 12	protein-coding
common_peak1-13642-16-16-0.0308008010177225-0.307611222530525	chr2	26118590	26119343	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-26026	NM_153559	227638	Mm.116769	NM_153559	ENSMUSG00000036327	Qsox2	BC030934|Qscn6l1|SOXN	quiescin Q6 sulfhydryl oxidase 2	protein-coding
unique_peak2-36566-13-39--1.54345606424959-2.96631085054194	chr2	170130258	170131243	+	0	NA	Intergenic	RSINE1|SINE|B4	-51111	NR_040610	73303	Mm.443297	NR_040610	ENSMUSG00000086999	Bcas1os2	1700040N02Rik	breast carcinoma amplified sequence 1, opposite strand 2	ncRNA
common_peak2-28330-14-24--0.74464002941708-0.756118839439549	chr4	134287373	134288392	+	0	NA	Intergenic	Intergenic	-27677	NM_207237	230815	Mm.18905	NM_207237	ENSMUSG00000037306	Man1c1	AI593348	mannosidase, alpha, class 1C, member 1	protein-coding
common_peak2-19893-26-29-0.0210084965499435-0.304710633611964	chr1	100231389	100232006	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-86004	NM_001164233	70866	Mm.389164	NM_027584	ENSMUSG00000026336	Slco6d1	4921511I05Rik	solute carrier organic anion transporter family, member 6d1	protein-coding
unique_peak2-36076-9-10--0.269818212233077-1.05503135781948	chr19	55453258	55453781	+	0	NA	intron (NM_016862, intron 3 of 7)	intron (NM_016862, intron 3 of 7)	62972	NM_001293686	53611	Mm.258637	NM_016862	ENSMUSG00000024983	Vti1a	1110014F16Rik|1110018K19Rik|4921537J05Rik|MVti1|MVti1a|Vti1|Vti1-rp2	vesicle transport through interaction with t-SNAREs 1A	protein-coding
common_peak1-15587-7-11--0.785871670422967-1.21681515183528	chr4	129461591	129462094	+	0	NA	Intergenic	MTC|LTR|MaLR	-35881	NM_008974	19244	Mm.193688	NM_008974	ENSMUSG00000028788	Ptp4a2	Prl-2	protein tyrosine phosphatase 4a2	protein-coding
common_peak2-30680-25-45--0.661712050711907-1.05820747366651	chr7	105743748	105744703	+	0	NA	intron (NM_172280, intron 17 of 19)	intron (NM_172280, intron 17 of 19)	60854	NM_172280	233545	Mm.387819	NM_172280	ENSMUSG00000035401	2210018M11Rik	2310016L09Rik|AU019521|AU019557|Emsy	RIKEN cDNA 2210018M11 gene	protein-coding
common_peak2-27098-41-53--0.053738797314808-0.303098095889886	chr3	138525745	138527072	+	0	NA	intron (NR_121195, intron 1 of 7)	B1_Mus1|SINE|Alu	121236	NM_019571	56224	Mm.31927	NM_019571	ENSMUSG00000028152	Tspan5	2810455A09Rik|4930505M03Rik|NET-4|Tm4sf9	tetraspanin 5	protein-coding
common_peak2-23889-16-15-0.118263642268062-0.328191099940264	chr16	93732732	93733466	+	0	NA	intron (NM_026700, intron 2 of 3)	B1_Mus2|SINE|Alu	20947	NM_027293	70028	Mm.23230	NM_026700	ENSMUSG00000022946	Dopey2	0610038M01Rik|2610510B01Rik|AI503246|C21orf5|mKIAA0933	dopey family member 2	protein-coding
common_peak2-30751-23-37--0.526160008934505-0.720235944639228	chr7	119793715	119794720	+	0	NA	Intergenic	L1MB7|LINE|L1	-28617	NM_001166584	21676	Mm.24685	NM_009346	ENSMUSG00000055320	Tead1	2610024B07Rik|B230114H05Rik|Gtrgeo5|TEAD-1|TEF-1|Tcf13|mTEF-1	TEA domain family member 1	protein-coding
common_peak2-20628-9-12--0.510826311736872-0.394412252720706	chr10	80434704	80435497	+	0	NA	intron (NM_010319, intron 2 of 3)	intron (NM_010319, intron 2 of 3)	29010	NM_001038655	14708	Mm.222496	NM_010319	ENSMUSG00000048240	Gng7	AI840417	guanine nucleotide binding protein (G protein), gamma 7	protein-coding
unique_peak1-307-27-5-2.40658345017408-5.07532537266956	chr1	127981772	127982891	+	0	NA	intron (NM_172484, intron 8 of 14)	intron (NM_172484, intron 8 of 14)	-173540	NM_145100	72585	Mm.490405	NM_145100		Lypd1	2700050C12Rik|AI853408|C530008O16Rik|Lynx2|Lypdc1	Ly6/Plaur domain containing 1	protein-coding
common_peak2-21698-18-8-1.14299414978604-1.45476480588849	chr11	106588561	106588977	+	0	NA	Intergenic	Intergenic	-12174	NM_008816	18613	Mm.343951	NM_008816	ENSMUSG00000020717	Pecam1	C85791|Cd31|PECAM-1|Pecam	platelet/endothelial cell adhesion molecule 1	protein-coding
common_peak2-24843-26-65--1.11649502719999-3.16814290467713	chr17	74528192	74529700	+	0	NA	Intergenic	Intergenic	-131690	NM_053188	94224	Mm.38933	NM_053188	ENSMUSG00000038541	Srd5a2	5ART2|S5AR 2	steroid 5 alpha-reductase 2	protein-coding
common_peak2-24095-58-76-0.0291633941955958-0.313639332470866	chr16	32078385	32079425	+	0	NA	intron (NM_177326, intron 1 of 14)	CpG	523	NM_177326	224105	Mm.234204	NM_177326	ENSMUSG00000022781	Pak2	5330420P17Rik|A130002K10Rik|AI836325|D16Ertd269e|PAK-2|mKIAA4182	p21 protein (Cdc42/Rac)-activated kinase 2	protein-coding
common_peak2-30292-18-25--0.38752056691274-0.421916810733234	chr7	19228364	19228809	+	0	NA	Intergenic	ORR1A2-int|LTR|MaLR	13488	NM_027403	72242	Mm.326858	NM_027403	ENSMUSG00000070796	Psg21	1600019C01Rik|1600025N01Rik|1600026N13Rik|cea8	pregnancy-specific glycoprotein 21	protein-coding
common_peak2-25592-68-79-0.248032684410934-0.62096275440975	chr19	8712684	8714158	+	0	NA	Intergenic	Intergenic	20935	NM_008766	18399	Mm.30090	NM_008766	ENSMUSG00000024650	Slc22a6	NKT|Oat1|Orctl1|mOat1	solute carrier family 22 (organic anion transporter), member 6	protein-coding
unique_peak2-32830-3-5--0.998945590680433-0.96108193396963	chr1	189866319	189866644	+	0	NA	intron (NM_011935, intron 1 of 6)	intron (NM_011935, intron 1 of 6)	-33612	NR_038007	320272	Mm.446274	NR_038007		9330162B11Rik	-	RIKEN cDNA 9330162B11 gene	ncRNA
common_peak2-28609-41-34-0.571865687903694-1.12519986426579	chr5	24164701	24165453	+	0	NA	Intergenic	RLTR1B|LTR|ERV1	13806	NR_003953	72252	Mm.87446	NR_003953	ENSMUSG00000038165	1700022A21Rik	-	glycerol-3-phosphate dehydrogenase 1-like pseudogene	pseudo
common_peak2-19971-17-6-1.41094141614743-1.84350559086818	chr1	133212326	133212818	+	0	NA	intron (NM_001081011, intron 17 of 22)	Charlie8|DNA|MER1_type	-36432	NM_019777	56489	Mm.386783	NM_019777	ENSMUSG00000042349	Ikbke	AW558201|IKK-i|IKKepsilon|Ikki	inhibitor of kappaB kinase epsilon	protein-coding
unique_peak1-6847-8-9--0.316705676939792-1.03275496310833	chr8	84725708	84726229	+	0	NA	Intergenic	Intergenic	200517	NM_001254747	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak2-21456-15-4-1.69023665566829-1.97518968347063	chr11	86961464	86961883	+	0	NA	intron (NM_197987, intron 7 of 23)	B1_Mus1|SINE|Alu	21096	NM_197987	68729	Mm.17436	NM_197987	ENSMUSG00000018548	Trim37	1110032A10Rik|2810004E07Rik|AI848587|AU043018|MUL|TEF3|mKIAA0898	tripartite motif-containing 37	protein-coding
unique_peak2-32803-6-7--0.434601889619698-0.97990265578305	chr1	183378667	183379115	+	0	NA	intron (NM_028408, intron 3 of 5)	intron (NM_028408, intron 3 of 5)	62691	NM_207280	403180	Mm.220754	NM_207280	ENSMUSG00000050625	Ccdc121	6530421E24Rik|Gm755	coiled-coil domain containing 121	protein-coding
unique_peak1-343-9-1-2.18961340640422-2.31132995230379	chr1	135039220	135039787	+	0	NA	Intergenic	MTD|LTR|MaLR	11760	NM_133819	108954	Mm.293628	NM_133819	ENSMUSG00000046062	Ppp1r15b	1810033K10Rik|AI606441|C530022L24Rik|CReP	protein phosphatase 1, regulatory (inhibitor) subunit 15b	protein-coding
unique_peak2-37197-9-7-0.18961340640422-1.05908390183068	chr4	59332069	59332447	+	0	NA	intron (NM_001163288, intron 15 of 16)	intron (NM_001163288, intron 15 of 16)	59335	NR_105031	101055769	Mm.421401	NR_105031		LOC101055769	-	uncharacterized LOC101055769	ncRNA
common_peak2-20297-15-18--0.235762762887929-0.326591483156968	chr1	193415364	193416014	+	0	NA	intron (NM_178632, intron 4 of 19)	Charlie1|DNA|MER1_type	16076	NM_178632	77065	Mm.338175	NM_178632	ENSMUSG00000037461	Ints7	5930412E23Rik	integrator complex subunit 7	protein-coding
common_peak2-19990-65-46-0.93757708779949-3.44850397450748	chr1	134091450	134093006	+	0	NA	intron (NM_001033250, intron 1 of 3)	intron (NM_001033250, intron 1 of 3)	-2437	NR_029777	723818		NR_029777	miRBase:MI0000646	Mir135b	Mirn135b	microRNA 135b	ncRNA
unique_peak1-1758-13-2-2.19350952991661-3.03832868024006	chr13	109262638	109263349	+	0	NA	Intergenic	L1_Mus3|LINE|L1	156462	NM_178683	218581	Mm.32318	NM_178683	ENSMUSG00000021697	Depdc1b	9830132O03|AW260467|XTP1	DEP domain containing 1B	protein-coding
common_peak2-30023-7-9--0.522837264589173-1.05908390183068	chr6	125319498	125320034	+	0	NA	intron (NM_198604, intron 14 of 16)	intron (NM_198604, intron 14 of 16)	10756	NM_198604	213522	Mm.333396	NM_198604	ENSMUSG00000038167	Plekhg6	BC026778|Gm155	pleckstrin homology domain containing, family G (with RhoGef domain) member 6	protein-coding
common_peak2-28460-39-47-0.0307987461979975-0.310078451983505	chr4	151933717	151934569	+	0	NA	intron (NM_153424, intron 25 of 29)	intron (NM_153424, intron 25 of 29)	81892	NM_153424	260305	Mm.302496	NM_153424	ENSMUSG00000039577	Nphp4	4930564O18Rik|nmf192	nephronophthisis 4 (juvenile) homolog (human)	protein-coding
common_peak1-19076-8-9--0.316705676939792-1.03275496310833	chr9	70328748	70329272	+	0	NA	intron (NM_033604, intron 2 of 14)	B1_Mur2|SINE|Alu	22522	NM_033604	93836	Mm.29783	NM_033604	ENSMUSG00000032217	Rnf111	ARK|Arkadia	ring finger 111	protein-coding
common_peak2-25528-58-38-1.01054771602825-3.48811054743252	chr19	5812330	5813596	+	0	NA	Intergenic	Intergenic	-10292	NR_002847	72289	Mm.298256	NR_002847	ENSMUSG00000092341	Malat1	2210401K01Rik|9430072K23Rik|AI647968|Neat2	metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)	ncRNA
unique_peak1-5806-13-1-2.77847203063777-3.64038867156802	chr6	67086885	67087495	+	0	NA	Intergenic	Intergenic	-99789	NM_007836	13197	Mm.72235	NM_007836	ENSMUSG00000036390	Gadd45a	AA545191|Ddit1|GADD45	growth arrest and DNA-damage-inducible 45 alpha	protein-coding
unique_peak2-33623-3-11--1.99894559068043-1.95434855131066	chr11	97187317	97187840	+	0	NA	intron (NM_025927, intron 5 of 7)	(CA)n|Simple_repeat|Simple_repeat	10548	NM_025927	67036	Mm.5381	NM_025927	ENSMUSG00000018882	Mrpl45	2600005P05Rik|AU043542|R75241	mitochondrial ribosomal protein L45	protein-coding
common_peak1-17261-89-48-1.42025691071079-8.98682579904902	chr6	134699476	134701864	+	0	NA	intron (NM_001048054, intron 3 of 6)	GA-rich|Low_complexity|Low_complexity	41976	NM_130447	70686	Mm.491182	NM_130447	ENSMUSG00000030203	Dusp16	3830417M17Rik|AW558566|D6Ertd213e|MKP-7|MKP7|Mkpm	dual specificity phosphatase 16	protein-coding
common_peak2-25497-26-10-1.46846747352116-2.57346781069461	chr19	5389686	5390294	+	0	NA	TTS (NR_033224)	TTS (NR_033224)	-1287	NM_016882	20227	Mm.34562	NM_016882	ENSMUSG00000039148	Sart1	U5-110K	squamous cell carcinoma antigen recognized by T cells 1	protein-coding
common_peak2-24797-7-8--0.370834171144123-1.00793137938329	chr17	66077200	66077632	+	0	NA	intron (NM_133685, intron 1 of 6)	intron (NM_133685, intron 1 of 6)	44676	NM_133685	106572	Mm.29274	NM_133685	ENSMUSG00000056515	Rab31	1700093E07Rik|AI415285|Rab22B	RAB31, member RAS oncogene family	protein-coding
common_peak2-20062-23-31--0.278232495490919-0.396392531282608	chr1	152766406	152767228	+	0	NA	intron (NM_001024720, intron 1 of 106)	intron (NM_001024720, intron 1 of 106)	73748	NM_001024720	545370	Mm.379425	NM_001024720	ENSMUSG00000066842	Hmcn1	EG545370|Gm201	hemicentin 1	protein-coding
common_peak1-15627-25-23-0.27688740462395-0.451698068655807	chr4	133632778	133633755	+	0	NA	intron (NM_001162970, intron 5 of 19)	intron (NM_001162970, intron 5 of 19)	8899	NM_001162970	230806	Mm.240080	NM_001162970	ENSMUSG00000012123	Aim1l	-	absent in melanoma 1-like	protein-coding
common_peak2-24456-12-11-0.0638134843664826-0.337263207250336	chr17	23726371	23726963	+	0	NA	intron (NM_011747, intron 1 of 5)	intron (NM_011747, intron 1 of 5)	9787	NM_011747	22654	Mm.40326	NM_011747	ENSMUSG00000062012	Zfp13	4933429B21|AI835008|Krox-8|Rhit|Zfp-13	zinc finger protein 13	protein-coding
common_peak2-25437-20-11-0.903112283870037-1.11267835143409	chr19	3926495	3927106	+	0	NA	intron (NM_026316, intron 1 of 9)	intron (NM_026316, intron 1 of 9)	2916	NM_026316	67689	Mm.109341	NM_026316	ENSMUSG00000024885	Aldh3b1	1700001N19Rik|ALDH4|ALDH7	aldehyde dehydrogenase 3 family, member B1	protein-coding
common_peak2-19885-14-10-0.439784541720347-0.519648556297791	chr1	97580390	97580902	+	0	NA	Intergenic	Lx7|LINE|L1	-16475	NM_001159745	20452	Mm.306228	NM_009183	ENSMUSG00000040710	St8sia4	PST|PST-1|SIAT8-D|ST8SiaIV|Siat8d	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4	protein-coding
common_peak1-11484-23-25-0.0213277863679888-0.30528805757448	chr15	102242816	102243834	+	0	NA	intron (NM_013672, intron 3 of 5)	intron (NM_013672, intron 3 of 5)	6578	NM_013672	20683	Mm.4618	NM_013672	ENSMUSG00000001280	Sp1	1110003E12Rik|AA450830|AI845540|Sp1-1	trans-acting transcription factor 1	protein-coding
unique_peak1-336-8-1-2.00522241794757-2.05605744720049	chr1	134068969	134069441	+	0	NA	Intergenic	MT2B2|LTR|ERVL	-18808	NM_001033250	213409	Mm.426321	NM_001033250	ENSMUSG00000079330	Lemd1	4930540I23Rik|6430514M23Rik|AI428128|LEMP-1	LEM domain containing 1	protein-coding
unique_peak1-3075-8-1-2.00522241794757-2.05605744720049	chr18	20714419	20715002	+	0	NA	Intergenic	Intergenic	-1907	NM_007883	13511	Mm.345891	NM_007883	ENSMUSG00000044393	Dsg2	AA408168|D18Ertd293e	desmoglein 2	protein-coding
unique_peak1-6711-10-2-1.77145284428761-2.09384600808989	chr8	35430742	35431236	+	0	NA	Intergenic	L1MC4|LINE|L1	-201223	NR_105820	102465211		NR_105820	miRBase:MI0021930	Mir6395	mmu-mir-6395	microRNA mir-6395	ncRNA
unique_peak2-34501-3-7--1.41398308995928-1.23214870625617	chr14	46884734	46885167	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-114249	NR_037981	100041724	Mm.383311	NM_001099324	ENSMUSG00000079261	Gm15217	OTTMUSG00000019524	predicted gene 15217	ncRNA
unique_peak2-35323-3-7--1.41398308995928-1.23214870625617	chr17	17601983	17602409	+	0	NA	Intergenic	Intergenic	62546	NM_025681	66643	Mm.268018	NM_025681	ENSMUSG00000047786	Lix1	5730466L18Rik	limb expression 1 homolog (chicken)	protein-coding
unique_peak2-32857-3-5--0.998945590680433-0.96108193396963	chr10	71368644	71369017	+	0	NA	Intergenic	RLTR25B|LTR|ERVK	74608	NR_003644	108950	Mm.212793	NM_175390	ENSMUSG00000043859	1700049L16Rik	-	hematological and neurological expressed 1-like pseudogene	pseudo
unique_peak2-33323-5-6--0.511735258063458-0.947717972411649	chr11	12234418	12234737	+	0	NA	intron (NM_172496, intron 7 of 14)	URR1A|DNA|MER1_type	77566	NM_001282994	12808	Mm.22847	NM_172496	ENSMUSG00000020173	Cobl	-	cordon-bleu WH2 repeat	protein-coding
common_peak1-18605-12-15--0.351224014912361-0.332077462497413	chr8	107056242	107056737	+	0	NA	intron (NM_144931, intron 1 of 19)	intron (NM_144931, intron 1 of 19)	2048	NM_144931	234664	Mm.237670	NM_144931	ENSMUSG00000031878	Nae1	59kDa|Appbp1	NEDD8 activating enzyme E1 subunit 1	protein-coding
unique_peak2-35582-5-13--1.51173525806346-1.78669045979184	chr17	72917557	72918254	+	0	NA	intron (NM_007439, intron 1 of 28)	intron (NM_007439, intron 1 of 28)	35742	NM_007439	11682	Mm.311854	NM_007439	ENSMUSG00000055471	Alk	CD246|Tcrz	anaplastic lymphoma kinase	protein-coding
common_peak1-13938-26-31--0.0721009078415378-0.304589945962371	chr2	90678802	90679819	+	0	NA	Intergenic	ID_B1|SINE|B4	-8002	NM_019758	56428	Mm.28023	NM_019758	ENSMUSG00000027282	Mtch2	2310034D24Rik|4930539J07Rik|HSPC032	mitochondrial carrier homolog 2 (C. elegans)	protein-coding
common_peak1-12848-60-27-1.54693693956293-6.6133687752674	chr18	73947862	73949596	+	0	NA	intron (NM_145494, intron 10 of 15)	intron (NM_145494, intron 10 of 15)	26317	NM_145494	107029	Mm.36817	NM_145494	ENSMUSG00000024556	Me2	AW120568|D030040L20Rik|NAD-ME	malic enzyme 2, NAD(+)-dependent, mitochondrial	protein-coding
common_peak2-23208-55-83--0.187697551626059-0.413122813965767	chr15	102005623	102007908	+	0	NA	TTS (NM_144942)	TTS (NM_144942)	12709	NM_144942	246277	Mm.296382	NM_144942	ENSMUSG00000023044	Csad	Csd	cysteine sulfinic acid decarboxylase	protein-coding
common_peak2-23840-32-35-0.109167017777348-0.348003640999429	chr15	101953280	101954455	+	0	NA	intron (NM_001033277, intron 6 of 10)	B1_Mur1|SINE|Alu	12779	NM_001033277	223918	Mm.385009	NM_001033277	ENSMUSG00000036966	Spryd3	BC008150	SPRY domain containing 3	protein-coding
unique_peak2-38792-4-5--0.608423014574403-0.909929411522249	chr7	130574262	130574598	+	0	NA	TTS (NM_025304)	TTS (NM_025304)	-31378	NM_007474	11833	Mm.273175	NM_007474	ENSMUSG00000030762	Aqp8	AI255744|AQP-8	aquaporin 8	protein-coding
unique_peak2-38412-7-11--0.785871670422967-1.21681515183528	chr7	24237218	24237819	+	0	NA	Intergenic	MTC|LTR|MaLR	53090	NM_001101562	622032	Mm.474428	NM_001101562	ENSMUSG00000090715	Vmn1r167	EG622032|Gm6279	vomeronasal 1 receptor 167	protein-coding
unique_peak1-2732-12-3-1.64877598508764-2.36932189928148	chr16	97309930	97310477	+	0	NA	intron (NM_031174, intron 1 of 32)	intron (NM_031174, intron 1 of 32)	82139	NM_031174	13508	Mm.328737	NM_031174	ENSMUSG00000050272	Dscam	4932410A21Rik	Down syndrome cell adhesion molecule	protein-coding
unique_peak1-3274-16-0-4.11826364226806-5.41853992195166	chr18	73541679	73542452	+	0	NA	Intergenic	Intergenic	-190294	NM_001039214	240396	Mm.24131	NM_001039214	ENSMUSG00000037253	Mex3c	A130001D14Rik|BC035207|BM-013|Rkhd2	mex3 homolog C (C. elegans)	protein-coding
common_peak1-8499-39-61--0.338435063467721-0.585862008351123	chr10	81626684	81628374	+	0	NA	Intergenic	Intergenic	36771	NM_001163064	216177	Mm.482395	NM_001163064		AU041133	-	expressed sequence AU041133	protein-coding
common_peak1-9289-18-31--0.687080848771648-0.820293215674341	chr11	88556929	88557894	+	0	NA	intron (NM_001201341, intron 5 of 7)	intron (NM_001201341, intron 5 of 7)	22132	NM_054043	76626	Mm.400451	NM_054043	ENSMUSG00000069769	Msi2	1700105C15Rik|AI451722|AI563628|AW489193|Msi2h	musashi RNA-binding protein 2	protein-coding
unique_peak1-2611-7-5-0.214128329577033-1.01466476204226	chr16	33871329	33871846	+	0	NA	intron (NM_010580, intron 3 of 14)	intron (NM_010580, intron 3 of 14)	41836	NM_001145884	16419	Mm.6424	NM_010580	ENSMUSG00000022817	Itgb5	AA475909|AI874634|ESTM23|[b]-5|[b]5|[b]5A|[b]5B|beta-5|beta5	integrin beta 5	protein-coding
common_peak1-15391-39-40-0.25820924230107-0.498996592876743	chr4	77309679	77310704	+	0	NA	intron (NM_011211, intron 2 of 39)	intron (NM_011211, intron 2 of 39)	547608	NM_011211	19266	Mm.184021	NM_011211	ENSMUSG00000028399	Ptprd	1110002J03Rik|3000002J10Rik|B230219D21Rik|R-PTP-delta	protein tyrosine phosphatase, receptor type, D	protein-coding
common_peak1-13498-49-33-0.918820981774845-2.49055970218346	chr2	38485739	38487485	+	0	NA	intron (NM_011187, intron 5 of 7)	B1_Mur2|SINE|Alu	12814	NM_011187	19177	Mm.389251	NM_011187	ENSMUSG00000026750	Psmb7	AU020723|MC14	proteasome (prosome, macropain) subunit, beta type 7	protein-coding
common_peak1-17307-16-17--0.0516613591742505-0.301029995663984	chr6	137754424	137755078	+	0	NA	intron (NM_172733, intron 6 of 8)	intron (NM_172733, intron 6 of 8)	51653	NM_172733	232449	Mm.29181	NM_172733	ENSMUSG00000030225	Dera	2010002D22Rik|2500002K03Rik|DEOC	2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	protein-coding
unique_peak1-1270-6-1-1.5653981103803-1.56314192529759	chr11	117797055	117797569	+	0	NA	Intergenic	ID_B1|SINE|B4	33368	NM_007707	12702	Mm.3468	NM_007707	ENSMUSG00000053113	Socs3	Cis3|Cish3|EF-10|Ef10|SSI-3|Ssi3	suppressor of cytokine signaling 3	protein-coding
common_peak2-21421-12-7-0.648775985087639-0.697979855752659	chr11	84513041	84513553	+	0	NA	Intergenic	Intergenic	20637	NR_046197	78471	Mm.47152	NR_046197	ENSMUSG00000085044	1700109G15Rik	-	RIKEN cDNA 1700109G15 gene	ncRNA
common_peak1-7571-10-25--1.34402437313232-1.74319850844462	chr1	44119326	44120047	+	0	NA	Intergenic	Intergenic	39547	NM_029368	75623	Mm.348017	NM_029368	ENSMUSG00000026049	Tex30	1700029F09Rik|3110030D08Rik	testis expressed 30	protein-coding
common_peak2-26945-21-23--0.0154732354549205-0.305650498375555	chr2	164548641	164549447	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	8239	NM_001040055	641368	Mm.422380	NM_001040055	ENSMUSG00000074593	Spint5	Gm14316|OTTMUSG00000016293	serine protease inhibitor, Kunitz type 5	protein-coding
unique_peak2-39378-3-6--1.22133801201688-1.08602067057793	chr9	20976313	20976734	+	0	NA	intron (NM_183408, intron 1 of 14)	RSINE1|SINE|B4	6365	NM_183408	18577	Mm.191749	NM_019798	ENSMUSG00000032177	Pde4a	D9Ertd60e|Dpde2	phosphodiesterase 4A, cAMP specific	protein-coding
common_peak2-31870-6-8--0.60452689106201-1.03789460276074	chr9	54642254	54642665	+	0	NA	Intergenic	MIRc|SINE|MIR	29904	NM_013496	12903	Mm.34797	NM_013496	ENSMUSG00000032291	Crabp1	AI326249|CRABP-I|Crabp-1|CrabpI|Rbp-5	cellular retinoic acid binding protein I	protein-coding
common_peak1-19088-15-14-0.105274154947137-0.330004445983672	chr9	70902835	70903681	+	0	NA	Intergenic	Intergenic	107182	NM_001271843	64008	Mm.449427	NM_022026	ENSMUSG00000032204	Aqp9	1700020I22Rik|AI266899|AQP-9	aquaporin 9	protein-coding
common_peak2-23910-45-59--0.046532570263647-0.302885977585733	chr16	4885536	4886901	+	0	NA	5' UTR (NM_029657, exon 1 of 17)	5' UTR (NM_029657, exon 1 of 17)	118	NM_001252437	17237	Mm.291326	NM_029657	ENSMUSG00000022517	Mgrn1	2610042J20Rik|mKIAA0544|md|nc	mahogunin, ring finger 1	protein-coding
unique_peak1-1756-20-0-4.48807478459119-NA	chr13	108670817	108671334	+	0	NA	intron (NM_145456, intron 2 of 14)	B3|SINE|B2	9183	NM_145456	67263	Mm.490418	NM_145456	ENSMUSG00000032846	Zswim6	2900036G02Rik|mKIAA1577	zinc finger SWIM-type containing 6	protein-coding
common_peak1-13136-38-31-0.57145265929853-1.10165134406427	chr19	9898275	9899558	+	0	NA	Intergenic	L1Md_F2|LINE|L1	75107	NM_016692	16319	Mm.29755	NM_016692	ENSMUSG00000024660	Incenp	2700067E22Rik|AU019509|C130081E20|C77457	inner centromere protein	protein-coding
common_peak2-21772-14-22--0.624345795699369-0.590343908676233	chr11	117076401	117077061	+	0	NA	intron (NM_001113486, intron 1 of 11)	RSINE1|SINE|B4	15756	NM_001113486	53860	Mm.38450	NM_017380	ENSMUSG00000059248	Sept9	MSF1|Msf|PNUTL4|Sint1	septin 9	protein-coding
common_peak1-8759-12-7-0.648775985087639-0.697979855752659	chr11	5555170	5555740	+	0	NA	intron (NM_023816, intron 23 of 26)	L1_Mus2|LINE|L1	52247	NM_026080	64660	Mm.7328	NM_026080	ENSMUSG00000020477	Mrps24	3110030K20Rik|AI414579|Rpms24	mitochondrial ribosomal protein S24	protein-coding
common_peak1-9207-22-44--0.84456899124227-1.45193041780123	chr11	82764176	82765019	+	0	NA	intron (NR_045932, intron 1 of 2)	intron (NR_045932, intron 1 of 2)	-1007	NM_183201	327978	Mm.42147	NM_183201	ENSMUSG00000054404	Slfn5	AI956840	schlafen 5	protein-coding
common_peak1-15597-29-9-1.79036198572775-3.86499617670048	chr4	129913637	129914965	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-14762	NM_001034872	332942	Mm.387701	NM_001034872	ENSMUSG00000023120	Gm853	OTTMUSG00000009560	predicted gene 853	protein-coding
common_peak1-18780-38-28-0.713471664170958-1.45748092439675	chr8	128025173	128026240	+	0	NA	Intergenic	Intergenic	-9096	NM_001081337	244668	Mm.271668	NM_001081337	ENSMUSG00000001995	Sipa1l2	BC058408|mKIAA1389	signal-induced proliferation-associated 1 like 2	protein-coding
unique_peak2-36361-5-7--0.704380336005853-1.01466476204226	chr2	103294368	103294822	+	0	NA	3' UTR (NM_009804, exon 13 of 13)	3' UTR (NM_009804, exon 13 of 13)	30370	NM_010125	13711	Mm.20888	NM_010125	ENSMUSG00000027186	Elf5	ESE-2|ESE-5|ESE-5.	E74-like factor 5	protein-coding
common_peak1-10654-30-42--0.256589345210225-0.401350871931209	chr14	47472244	47473269	+	0	NA	intron (NM_026832, intron 4 of 5)	intron (NM_026832, intron 4 of 5)	20837	NM_026832	68755	Mm.343809	NM_026832	ENSMUSG00000055128	Cgrrf1	1110038G02Rik|1810009H17Rik|CGR19	cell growth regulator with ring finger domain 1	protein-coding
unique_peak2-34299-9-6-0.382258484346616-1.11707584880836	chr13	77131322	77131751	+	0	NA	intron (NM_030174, intron 17 of 20)	RLTR6-int|LTR|ERV1	143193	NM_134071	105377	Mm.209730	NM_134071	ENSMUSG00000021597	Ankrd32	2700017A04Rik|AW545819|Brctd1|Brctx|C730024G01Rik	ankyrin repeat domain 32	protein-coding
common_peak1-14909-15-22--0.511397205501357-0.50761186003982	chr3	97227765	97228326	+	0	NA	Intergenic	Intergenic	-12943	NM_146275	258272	Mm.377406	NM_146275	ENSMUSG00000051392	Olfr1402	MOR217-1	olfactory receptor 1402	protein-coding
unique_peak1-2116-8-0-3.00522241794757-2.70926996097583	chr15	41710444	41710848	+	0	NA	Intergenic	RMER20B|LTR|ERVK	-9380	NM_175456	223513	Mm.148913	NM_175456	ENSMUSG00000042895	Abra	C130068O12Rik|STARS	actin-binding Rho activating protein	protein-coding
common_peak1-8290-32-17-1.10916701777735-2.22933157796382	chr10	30728609	30729963	+	0	NA	Intergenic	Intergenic	-166697	NM_013904	15214	Mm.103573	NM_013904	ENSMUSG00000019789	Hey2	CHF1|Herp1|Hrt2|bHLHb32|hesr2	hairy/enhancer-of-split related with YRPW motif 2	protein-coding
unique_peak2-34212-7-11--0.785871670422967-1.21681515183528	chr13	44642026	44642673	+	0	NA	Intergenic	Intergenic	107253	NR_045489	69491	Mm.392410	NR_045489	ENSMUSG00000098144	1700029N11Rik	-	RIKEN cDNA 1700029N11 gene	ncRNA
unique_peak2-37672-9-6-0.382258484346616-1.11707584880836	chr5	93265440	93265923	+	0	NA	intron (NM_001077595, intron 1 of 9)	B3|SINE|B2	27273	NM_001077595	27428	Mm.46014	NM_015756	ENSMUSG00000029381	Shroom3	AL022960|D5Ertd287e|Shrm|Shrm3	shroom family member 3	protein-coding
common_peak2-30629-48-130--1.06249585030264-5.45834893577645	chr7	97081187	97083134	+	0	NA	intron (NM_001291288, intron 2 of 5)	intron (NM_001291288, intron 2 of 5)	7554	NM_001291289	67669	Mm.28679	NM_026304		l7Rn6	0610007P06Rik|1110002N09Rik|l(7)6Rn	lethal, Chr 7, Rinchik 6	protein-coding
common_peak2-30738-22-17-0.477359103645092-0.633951497070961	chr7	118309564	118310366	+	0	NA	Intergenic	Intergenic	-43776	NR_015573	75479	Mm.381620	NR_015573		1700012D14Rik	-	RIKEN cDNA 1700012D14 gene	ncRNA
common_peak1-17245-46-71--0.271929058193511-0.501837478813381	chr6	128798977	128800145	+	0	NA	3' UTR (NM_001254946, exon 3 of 3)	3' UTR (NM_001254946, exon 3 of 3)	-23228	NM_030599	80782	Mm.6180	NM_030599	ENSMUSG00000079298	Klrb1b	Klrb1d|Ly55b|Ly55d|NKR-P1B|NKR-P1D|Nkrp1-b|Nkrp1d	killer cell lectin-like receptor subfamily B member 1B	protein-coding
common_peak1-12758-52-18-1.86033247682211-7.22795699334069	chr18	60611827	60613516	+	0	NA	Intergenic	B4A|SINE|B4	48966	NM_134133	106878	Mm.273197	NM_134133	ENSMUSG00000038059	Smim3	2010002N04Rik|AI195350|AW561905|Nid67|cI-41	small integral membrane protein 3	protein-coding
common_peak2-24180-22-25--0.0531556130536872-0.301029995663976	chr16	50431478	50432385	+	0	NA	intron (NM_027444, intron 1 of 16)	CpG	571	NM_027444	70508	Mm.28940	NM_027444	ENSMUSG00000022641	Bbx	5530401J07Rik|5730403O13Rik	bobby sox homolog (Drosophila)	protein-coding
unique_peak2-36578-10-19--0.965512749878593-0.917676348953458	chr2	174327207	174327912	+	0	NA	Intergenic	B3A|SINE|B2	-29117	NM_025531	66390	Mm.182294	NM_025531	ENSMUSG00000016257	Slmo2	2310042G06Rik|AA407013	slowmo homolog 2 (Drosophila)	protein-coding
unique_peak2-36201-2-7--1.91745425626332-1.45399745587252	chr2	32776328	32776683	+	0	NA	exon (NM_146119, exon 9 of 14)	exon (NM_146119, exon 9 of 14)	40270	NM_199302	227738	Mm.248037	NM_199302	ENSMUSG00000026792	Lrsam1	-	leucine rich repeat and sterile alpha motif containing 1	protein-coding
common_peak1-10512-11-17--0.661231417190699-0.58239619684445	chr14	7818140	7818769	+	0	NA	Intergenic	B4A|SINE|B4	41509	NM_001164727	100038847	Mm.443041	NM_001164727	ENSMUSG00000093985	Gm10406	ENSMUSG00000072735	predicted gene 10406	protein-coding
common_peak2-28767-35-53--0.323517243700964-0.527635886371667	chr5	50058326	50059476	+	0	NA	Intergenic	L1Md_T|LINE|L1	-382003	NM_001199244	80334	Mm.160172	NM_030265	ENSMUSG00000029088	Kcnip4	AV032399|Calp|Calp250|KChIP4|KChIP4a	Kv channel interacting protein 4	protein-coding
common_peak2-21824-13-16--0.30899081061257-0.330004445983672	chr11	120039492	120040265	+	0	NA	Intergenic	Intergenic	11292	NR_030682	100042332	Mm.269766	NR_030682		2810410L24Rik	-	RIKEN cDNA 2810410L24 gene	ncRNA
unique_peak1-6536-10-1-2.35641534500877-2.57096726280955	chr7	125554658	125555256	+	0	NA	intron (NM_138649, intron 5 of 7)	(TCCA)n|Simple_repeat|Simple_repeat	32109	NM_138649	110058	Mm.156558	NM_138649	ENSMUSG00000058420	Syt17	Bk	synaptotagmin XVII	protein-coding
common_peak2-28981-6-4-0.24347001549294-0.989110657569874	chr5	105683944	105684238	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-15539	NM_001039646	626578	Mm.275893	NM_001039646	ENSMUSG00000054588	Gbp10	-	guanylate-binding protein 10	protein-coding
common_peak2-19649-53-78--0.162807735761175-0.372467125080179	chr1	43933172	43934812	+	0	NA	Intergenic	Charlie1a|DNA|MER1_type	-49439	NM_026430	67883	Mm.387202	NM_026430		Uxs1	1600025I13Rik|AI451869|AI649125|AW550562	UDP-glucuronate decarboxylase 1	protein-coding
unique_peak2-37333-5-4--0.0263084308932156-0.909929411522249	chr4	130295672	130296067	+	0	NA	intron (NM_030722, intron 7 of 21)	intron (NM_030722, intron 7 of 21)	-9684	NR_028565	100217460		NR_028565		Snord85	MBII-251|Z50	small nucleolar RNA, C/D box 85	snoRNA
unique_peak1-1010-22-6-1.8399291830298-3.01815507148775	chr11	74182762	74183657	+	0	NA	Intergenic	B2_Mm2|SINE|B2	5036	NM_001011851	258153	Mm.376124	NM_001011851	ENSMUSG00000058275	Olfr412	MOR127-5P	olfactory receptor 412	protein-coding
common_peak2-29323-26-24-0.284042902383738-0.446094173747083	chr5	146910908	146911808	+	0	NA	intron (NM_001105160, intron 8 of 12)	intron (NM_001105160, intron 8 of 12)	20524	NM_001105160	100041449	Mm.301900	NM_001105160	ENSMUSG00000061292	Cyp3a59	ENSMUSG00000061292	cytochrome P450, family 3, subfamily a, polypeptide 59	protein-coding
common_peak2-24016-4-6--0.830815435910851-0.989110657569874	chr16	21794455	21794785	+	0	NA	intron (NR_037957, intron 1 of 4)	CpG	200	NR_037957	100043489	Mm.326535	NR_037957	ENSMUSG00000097290	1300002E11Rik	1500026P21Rik	RIKEN cDNA 1300002E11 gene	ncRNA
common_peak1-7841-30-87--1.28975620914542-5.03445576072987	chr1	131096948	131098078	+	0	NA	Intergenic	Intergenic	-72368	NM_172485	210417	Mm.380518	NM_172485	ENSMUSG00000042581	Thsd7b	1700074E13Rik|B930082A18|D130067I03Rik	thrombospondin, type I, domain containing 7B	protein-coding
unique_peak1-722-12-5-1.06381348436648-1.78669045979184	chr10	93390995	93391674	+	0	NA	Intergenic	Intergenic	35274	NR_029764	723908		NR_029764	miRBase:MI0000609	Mir331	Mirn331|mmu-mir-331	microRNA 331	ncRNA
common_peak2-27905-48-10-2.51149553259752-9.612105505917	chr4	3874788	3875333	+	0	NA	intron (NR_104355, intron 7 of 8)	intron (NR_104355, intron 7 of 8)	8489	NR_104356	66433	Mm.27406	NM_181391	ENSMUSG00000042198	Chchd7	1810049H20Rik	coiled-coil-helix-coiled-coil-helix domain containing 7	protein-coding
common_peak2-25274-29-26-0.357402578451643-0.590428395010953	chr18	68057927	68059015	+	0	NA	Intergenic	Intergenic	-34440	NM_172631	52662	Mm.440183	NM_172631	ENSMUSG00000024544	Ldlrad4	8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik	low density lipoprotein receptor class A domain containing 4	protein-coding
common_peak1-13604-19-15-0.402687326661686-0.519193887192487	chr2	18998285	18999011	+	0	NA	Intergenic	L1M2|LINE|L1	78702	NR_024323	74629	Mm.117687	NR_024323	ENSMUSG00000026736	4930426L09Rik	-	RIKEN cDNA 4930426L09 gene	ncRNA
unique_peak2-39845-5-6--0.511735258063458-0.947717972411649	chrX	56597592	56598024	+	0	NA	intron (NM_001290414, intron 2 of 6)	intron (NM_001290414, intron 2 of 6)	-178543	NM_001290415	14168	Mm.7995	NM_010200	ENSMUSG00000031137	Fgf13	Fhf2	fibroblast growth factor 13	protein-coding
common_peak1-8201-20-21-0.0286431659538957-0.306080386793804	chr10	4432507	4433264	+	0	NA	intron (NM_001161822, intron 2 of 5)	intron (NM_001161822, intron 2 of 5)	8744	NM_019958	56533	Mm.44606	NM_019958	ENSMUSG00000019775	Rgs17	6430507P11Rik|Rgsz2	regulator of G-protein signaling 17	protein-coding
common_peak2-19655-26-22-0.404337136101449-0.569352520859861	chr1	51289159	51290342	+	0	NA	intron (NR_045151, intron 4 of 4)	Lx|LINE|L1	-56220	NM_138741	20324	Mm.398690	NM_138741	ENSMUSG00000045954	Sdpr	-	serum deprivation response	protein-coding
common_peak1-8811-13-7-0.778472030637769-0.817533494790411	chr11	20957940	20958579	+	0	NA	Intergenic	Intergenic	-33068	NM_023324	67245	Mm.28957	NM_023324	ENSMUSG00000020134	Peli1	2810468L03Rik|A930031K15Rik|AA409794|AI586297|D11Ertd676e	pellino 1	protein-coding
common_peak1-15621-101-92-0.714855425628389-3.63395729491256	chr4	133351935	133354566	+	0	NA	Intergenic	Intergenic	-43724	NM_001080819	93760	Mm.22478	NM_001080819	ENSMUSG00000007880	Arid1a	1110030E03Rik|BAF250a|Osa1|Smarcf1	AT rich interactive domain 1A (SWI-like)	protein-coding
unique_peak1-5784-9-0-3.18961340640422-3.01029995663981	chr6	56795749	56796220	+	0	NA	intron (NM_012056, intron 1 of 9)	B3|SINE|B2	13931	NM_012056	27055	Mm.20943	NM_012056	ENSMUSG00000029781	Fkbp9	1810014L23|AW549641|FKBP-63|FKBP-9|FKBP60|FKBP63|FKBP65RS	FK506 binding protein 9	protein-coding
common_peak1-9582-9-6-0.382258484346616-1.11707584880836	chr11	118417667	118418354	+	0	NA	intron (NM_001285436, intron 3 of 13)	B1_Mus2|SINE|Alu	79736	NM_172573	217364	Mm.473963	NM_172573	ENSMUSG00000033857	Engase	C130099A03|D230014K01Rik	endo-beta-N-acetylglucosaminidase	protein-coding
unique_peak2-34265-9-16--0.897849434846119-0.732381977911291	chr13	64370392	64371083	+	0	NA	intron (NM_172587, intron 1 of 13)	ID_B1|SINE|B4	5559	NM_172587	218294	Mm.25335	NM_172587	ENSMUSG00000033102	Cdc14b	2810432N10Rik|A530086E13Rik|AA472821|CDC14B3|Cdc14B1	CDC14 cell division cycle 14B	protein-coding
common_peak2-29332-81-110-0.0776337366584592-0.347910620254477	chr5	147429674	147431412	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-33728	NM_001010941	14738	Mm.153539	NM_008151	ENSMUSG00000041468	Gpr12	Gpcr01|Gpcr12|Gpcr20|Gpcr21	G-protein coupled receptor 12	protein-coding
common_peak2-30402-41-51-0.000708986707568471-0.303138254425616	chr7	34967748	34969354	+	0	NA	TTS (NM_026549)	TTS (NM_026549)	13115	NM_026549	68079	Mm.38173	NM_026549	ENSMUSG00000002635	Pdcd2l	6030457N17Rik	programmed cell death 2-like	protein-coding
unique_peak1-1521-9-4-0.867685311516858-1.36011389749466	chr13	11536111	11536621	+	0	NA	Intergenic	Intergenic	-77953	NR_027813	664793	Mm.410565	NR_027813		Zp4-ps	EG664793|Zp4|Zpb	zona pellucida glycoprotein 4, pseudogene	pseudo
common_peak2-22294-15-22--0.511397205501357-0.50761186003982	chr13	15659835	15660688	+	0	NA	intron (NM_008130, intron 3 of 14)	intron (NM_008130, intron 3 of 14)	104705	NM_008130	14634	Mm.5098	NM_008130	ENSMUSG00000021318	Gli3	AI854843|AU023367|Bph|GLI3-190|GLI3FL|Pdn|Xt|add	GLI-Kruppel family member GLI3	protein-coding
common_peak1-7578-7-8--0.370834171144123-1.00793137938329	chr1	51509631	51510157	+	0	NA	Intergenic	Intergenic	25349	NM_028696	109019	Mm.196290	NM_028696	ENSMUSG00000026107	Nabp1	4930434H03Rik|4930442A21Rik|4930488J04Rik|4933440J18Rik|5830411E10Rik|AI852561|Nbp1|Obfc2a|Ssb2	nucleic acid binding protein 1	protein-coding
unique_peak2-37185-6-7--0.434601889619698-0.97990265578305	chr4	55142053	55142498	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	181458	NM_172867	242466	Mm.102904	NM_172867	ENSMUSG00000060206	Zfp462	6030417H05|9430078C22Rik|Gt4-2|Zfpip	zinc finger protein 462	protein-coding
unique_peak2-36662-4-7--1.02346051385325-1.09384600808989	chr3	27183078	27183401	+	0	NA	Intergenic	Intergenic	-32760	NM_009425	22035	Mm.1062	NM_009425	ENSMUSG00000039304	Tnfsf10	A330042I21Rik|AI448571|APO-2L|Ly81|TL2|Trail	tumor necrosis factor (ligand) superfamily, member 10	protein-coding
unique_peak1-1031-14-5-1.31425365963649-1.4372489031793	chr11	76286819	76287551	+	0	NA	intron (NM_198894, intron 4 of 22)	B1_Mur1|SINE|Alu	-5218	NM_001291186	109934	Mm.258939	NM_198018	ENSMUSG00000017631	Abr	-	active BCR-related gene	protein-coding
common_peak2-20733-33-34-0.202054545580562-0.406785247261493	chr10	99242431	99243610	+	0	NA	Intergenic	L1Md_F3|LINE|L1	-20728	NM_027945	71832	Mm.483162	NM_027945	ENSMUSG00000046934	Csl	1700007H16Rik	citrate synthase like	protein-coding
common_peak2-21123-8-6-0.197867495889966-1.03789460276074	chr11	53764338	53764753	+	0	NA	3' UTR (NM_019723, exon 10 of 10)	3' UTR (NM_019723, exon 10 of 10)	28984	NM_019723	56517	Mm.154284	NM_019723	ENSMUSG00000063652	Slc22a21	Octn3|Slc22a9	solute carrier family 22 (organic cation transporter), member 21	protein-coding
unique_peak1-232-14-3-1.89921616035764-2.80787975886178	chr1	89453925	89454723	+	0	NA	intron (NM_001111314, intron 1 of 14)	L1M2|LINE|L1	16121	NM_001111314	53972	Mm.435439	NM_019867	ENSMUSG00000026259	Ngef	Tims2|ephexin	neuronal guanine nucleotide exchange factor	protein-coding
common_peak2-27072-19-42--1.02357742804041-1.85054049304327	chr3	7503289	7504124	+	0	NA	intron (NM_173181, intron 1 of 8)	CpG	280	NM_173181	67306	Mm.332366	NM_173181	ENSMUSG00000043542	Zc2hc1a	3110050N22Rik|AI790358|AU023959|Fam164a	zinc finger, C2HC-type containing 1A	protein-coding
common_peak1-18678-30-21-0.710243790854576-1.16836819221353	chr8	119436471	119437235	+	0	NA	intron (NM_026844, intron 1 of 3)	L1MB1|LINE|L1	8483	NM_026844	66531	Mm.4011	NM_026844	ENSMUSG00000014633	Cmc2	1110046L09Rik|2310061C15Rik|DC13	COX assembly mitochondrial protein 2	protein-coding
common_peak2-20529-13-12-0.0780323124966764-0.334470287753051	chr10	62601833	62602412	+	0	NA	intron (NM_182992, intron 10 of 19)	L1VL2|LINE|L1	39218	NM_016864	53404	Mm.228661	NM_016864	ENSMUSG00000036816	Atoh7	Math5|bHLHa13	atonal homolog 7 (Drosophila)	protein-coding
common_peak1-18328-24-31--0.206790097232283-0.334168439396943	chr8	60982545	60983431	+	0	NA	intron (NM_175032, intron 2 of 11)	Lx9|LINE|L1	196605	NM_001177534	100271928	Mm.484123	NM_001177534		Gm15881	OTTMUSG00000027193	predicted gene 15881	protein-coding
common_peak1-10298-10-15--0.643584654991231-0.519648556297791	chr13	63567798	63568410	+	0	NA	Intergenic	Intergenic	-35051	NM_001282942	14088	Mm.126106	NM_007985	ENSMUSG00000021461	Fancc	Facc	Fanconi anemia, complementation group C	protein-coding
unique_peak2-34994-2-9--2.23938235115068-1.87199725847353	chr15	99583773	99584184	+	0	NA	intron (NM_028015, intron 1 of 9)	intron (NM_028015, intron 1 of 9)	18968	NM_028015	71949	Mm.390821	NM_028015		Cers5	2310081H14Rik|AU045339|AW544927|Lass5|Trh4	ceramide synthase 5	protein-coding
common_peak2-27033-30-51--0.530764308649219-0.865433649227648	chr2	179976803	179977447	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	-14959	NM_025587	66481	Mm.289669	NM_025587	ENSMUSG00000039001	Rps21	1810049N11Rik|2410030A14Rik	ribosomal protein S21	protein-coding
common_peak1-15114-33-62--0.645942360974388-1.33955643568472	chr3	136668986	136669975	+	0	NA	Intergenic	Intergenic	-334562	NM_001163522	59308	Mm.27343	NM_016885	ENSMUSG00000054690	Emcn	0610012K22Rik|AI315669|Muc14	endomucin	protein-coding
common_peak1-17497-14-19--0.422711934529718-0.403453972741636	chr7	25267447	25268072	+	0	NA	intron (NM_153112, intron 1 of 8)	intron (NM_153112, intron 1 of 8)	717	NM_153112	260299	Mm.178322	NM_153112	ENSMUSG00000054793	Cadm4	Igdf4c|Igsf4c|Tsll2	cell adhesion molecule 4	protein-coding
unique_peak1-5273-13-0-3.77847203063777-4.51544993495972	chr5	64879236	64879821	+	0	NA	Intergenic	Intergenic	11281	NR_045413	77382	Mm.366742	NR_045411		C030018K13Rik	-	RIKEN cDNA C030018K13 gene	ncRNA
unique_peak2-37440-3-9--1.73591118484664-1.57096726280955	chr4	155085939	155086378	+	0	NA	intron (NM_026899, intron 1 of 4)	intron (NM_026899, intron 1 of 4)	7234	NM_026899	68991	Mm.294770	NM_026899	ENSMUSG00000029038	Ssu72	1190002E22Rik|1500011L16Rik|2610101M12Rik	Ssu72 RNA polymerase II CTD phosphatase homolog (yeast)	protein-coding
common_peak1-17059-14-4-1.57728806547028-2.4322161449009	chr6	99095231	99095710	+	0	NA	intron (NM_053202, intron 4 of 18)	B1_Mur3|SINE|Alu	-117178	NM_001197322	108655	Mm.234965	NM_053202	ENSMUSG00000030067	Foxp1	3110052D19Rik|4932443N09Rik|AI461938|AW494214	forkhead box P1	protein-coding
common_peak2-26195-4-9--1.34538860874061-1.36011389749466	chr2	25332802	25333315	+	0	NA	Intergenic	Intergenic	-7789	NM_008963	19215	Mm.1008	NM_008963	ENSMUSG00000015090	Ptgds	21kDa|L-PGDS|PGD2|PGDS|PGDS2|Ptgs3	prostaglandin D2 synthase (brain)	protein-coding
common_peak1-7851-82-30-1.93906683391886-12.6534714034694	chr1	132290740	132293364	+	0	NA	intron (NM_007827, intron 9 of 9)	L1_Mm|LINE|L1	27524	NM_007827	13137	Mm.436759	NM_007827	ENSMUSG00000026401	Daf2	AI323748|Cd55b|Daf|Daf-TM|TM-DAF	decay accelerating factor 2	protein-coding
unique_peak2-35694-4-7--1.02346051385325-1.09384600808989	chr18	24602896	24603300	+	0	NA	Intergenic	Intergenic	-15427	NR_029573	387182		NR_029573	miRBase:MI0000229	Mir187	Mirn187|mmu-mir-187	microRNA 187	ncRNA
common_peak2-30911-16-26--0.636623859895407-0.713114929964887	chr7	143739782	143740478	+	0	NA	Intergenic	Intergenic	162157	NR_046021	621677	Mm.207290	NR_046021		Gm6249	EG621677	predicted gene 6249	ncRNA
unique_peak1-6764-8-2-1.42025991722641-1.65811743852845	chr8	60491309	60491789	+	0	NA	intron (NM_175032, intron 4 of 11)	L1Md_F2|LINE|L1	-359697	NM_144731	108150	Mm.62886	NM_144731	ENSMUSG00000031608	Galnt7	AI225872	UDP-N-acetyl-alpha-D-galactosamine: polypeptide N-acetylgalactosaminyltransferase 7	protein-coding
common_peak1-16130-16-13-0.310908720210457-0.417187467413082	chr5	69591853	69592582	+	0	NA	intron (NM_175519, intron 1 of 1)	L1_Mus3|LINE|L1	140731	NM_175519	243043	Mm.234821	NM_175519	ENSMUSG00000037653	Kctd8	A730087N02Rik	potassium channel tetramerisation domain containing 8	protein-coding
common_peak1-14065-13-12-0.0780323124966764-0.334470287753051	chr2	120128998	120129579	+	0	NA	intron (NM_001024145, intron 14 of 19)	intron (NM_001024145, intron 14 of 19)	10613	NM_001024145	271844	Mm.24880	NM_001024145	ENSMUSG00000046971	Pla2g4f	4732472I07Rik|Gm647|Pla2zeta	phospholipase A2, group IVF	protein-coding
unique_peak2-38840-0-6--3.64748585253182-1.56314192529759	chr7	143025149	143025513	+	0	NA	Intergenic	Intergenic	-117269	NM_001081117	17345	Mm.4078	NM_001081117	ENSMUSG00000031004	Mki67	D630048A14Rik|Ki-67|Ki67	antigen identified by monoclonal antibody Ki 67	protein-coding
common_peak1-14409-94-176--0.338015982233681-1.19354504831001	chr2	174329391	174331313	+	0	NA	Intergenic	Intergenic	-31910	NM_025531	66390	Mm.182294	NM_025531	ENSMUSG00000016257	Slmo2	2310042G06Rik|AA407013	slowmo homolog 2 (Drosophila)	protein-coding
unique_peak2-38293-10-12--0.344024373132323-0.340565874754526	chr6	135070060	135070453	+	0	NA	Intergenic	Intergenic	-1955	NM_001205396	93746	Mm.49902	NM_053118	ENSMUSG00000030205	Gprc5d	-	G protein-coupled receptor, family C, group 5, member D	protein-coding
unique_peak1-5800-7-1-1.79909083029819-1.80617997398389	chr6	66444607	66445013	+	0	NA	Intergenic	Intergenic	-40652	NM_019499	56150	Mm.489653	NM_019499	ENSMUSG00000029910	Mad2l1	AA673185|MAD2	MAD2 mitotic arrest deficient-like 1	protein-coding
common_peak1-18955-13-14--0.12841856497075-0.301029995663977	chr9	50885556	50886276	+	0	NA	promoter-TSS (NM_001033534)	promoter-TSS (NM_001033534)	-717	NM_001033534	244864	Mm.335152	NM_001033534	ENSMUSG00000060594	Layn	E030012M19Rik|Gm511	layilin	protein-coding
unique_peak2-39198-6-12--1.13504160776079-1.45089835786865	chr8	104591391	104591803	+	0	NA	Intergenic	L1VL4|LINE|L1	717414	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
common_peak2-28546-8-15--0.994777582052429-0.771068449301683	chr5	3688357	3689043	+	0	NA	Intergenic	Intergenic	31696	NM_029154	75010	Mm.85064	NM_029141	ENSMUSG00000014529	Tmbim7	4930403J02Rik|4930500J03Rik|4930511M11Rik|Lgf5|Tmbim1b	transmembrane BAX inhibitor motif containing 7	protein-coding
common_peak2-21937-10-5-0.771452844287613-1.33892459842472	chr12	28649606	28650010	+	0	NA	Intergenic	Lx2B|LINE|L1	583394	NM_001177964	68511	Mm.310284	NM_001177964		Dcdc2c	1110015M06Rik	doublecortin domain containing 2C	protein-coding
common_peak2-29689-218-271-0.50379764583287-4.69466677638518	chr6	72898461	72900604	+	0	NA	Intergenic	ID_B1|SINE|B4	8694	NM_001039392	19240	Mm.3532	NM_025284	ENSMUSG00000079523	Tmsb10	Ptmb10|Tb10	thymosin, beta 10	protein-coding
unique_peak1-7334-7-4-0.477162735410827-1.09384600808989	chr9	123689848	123690255	+	0	NA	3' UTR (NM_009913, exon 3 of 3)	3' UTR (NM_009913, exon 3 of 3)	13722	NM_001166625	12769	Mm.440604	NM_009913		Ccr9	A130091K22Rik|Cmkbr10|GPR-9-6	chemokine (C-C motif) receptor 9	protein-coding
unique_peak2-37695-4-21--2.48289213249054-3.05312482518673	chr5	100498162	100498717	+	0	NA	TTS (NM_001163035)	TTS (NM_001163035)	-8542	NR_045993	76003	Mm.447060	NR_045993	ENSMUSG00000086259	Tmem150cos	5830403M04Rik	transmembrane protein 150C, opposite strand	ncRNA
unique_peak2-35154-12-6-0.841421063030034-1.58711810488664	chr16	33676604	33677027	+	0	NA	Intergenic	Intergenic	-7737	NM_175256	77446	Mm.245741	NM_172934	ENSMUSG00000075254	Heg1	4632417D23Rik|5530401I02Rik|9530025L16Rik|BC038614|Gm629|OTTMUSG00000027315	HEG homolog 1 (zebrafish)	protein-coding
unique_peak1-7076-9-6-0.382258484346616-1.11707584880836	chr9	20758944	20759699	+	0	NA	intron (NM_001199432, intron 1 of 38)	B1_Mus1|SINE|Alu	-1898	NM_001199431	13433	Mm.128580	NM_010066	ENSMUSG00000004099	Dnmt1	Cxxc9|Dnmt|Dnmt1o|MCMT|MTase|Met-1|Met1|MommeD2|m.MmuI	DNA methyltransferase (cytosine-5) 1	protein-coding
common_peak1-12022-25-47--0.72311259537605-1.23561791483487	chr17	15825731	15826589	+	0	NA	Intergenic	Intergenic	-15771	NM_007690	12648	Mm.8137	NM_007690	ENSMUSG00000023852	Chd1	4930525N21Rik|AI851787|AW555109	chromodomain helicase DNA binding protein 1	protein-coding
common_peak1-10716-38-82--0.803586772048394-2.25460892158572	chr14	61647112	61648578	+	0	NA	intron (NM_013869, intron 1 of 9)	Lx8|LINE|L1	8979	NM_001164155	29820	Mm.281356	NM_013869	ENSMUSG00000060548	Tnfrsf19	AL023044|AW123854|TAJ|TAJ-ALPHA|TRADE|Troy	tumor necrosis factor receptor superfamily, member 19	protein-coding
common_peak1-13919-20-16-0.400611943340854-0.507611860039817	chr2	84632461	84633304	+	0	NA	Intergenic	ID_B1|SINE|B4	-6103	NM_019949	56791	Mm.38261	NM_019949	ENSMUSG00000027078	Ube2l6	2810489I21Rik|RIG-B|UBCH8|Ubce8|Ubcm8	ubiquitin-conjugating enzyme E2L 6	protein-coding
common_peak2-26760-26-26-0.173011589994994-0.363124929330838	chr2	140170106	140171439	+	0	NA	intron (NM_001033296, intron 1 of 19)	L1_Mus1|LINE|L1	44674	NM_001033296	228684	Mm.486585	NM_001033296	ENSMUSG00000074764	Sel1l2	Gm118	sel-1 suppressor of lin-12-like 2 (C. elegans)	protein-coding
common_peak1-14371-91-15-3.07343194560234-24.2782681195701	chr2	167764394	167766099	+	0	NA	intron (NM_011201, intron 1 of 8)	intron (NM_011201, intron 1 of 8)	7419	NM_011201	19246	Mm.277916	NM_011201	ENSMUSG00000027540	Ptpn1	PTP-1B|PTP-HA2|PTP1B	protein tyrosine phosphatase, non-receptor type 1	protein-coding
unique_peak2-36573-5-6--0.511735258063458-0.947717972411649	chr2	173250501	173250888	+	0	NA	Intergenic	Intergenic	-97399	NM_028158	72221	Mm.46132	NM_028158	ENSMUSG00000027518	1700021F07Rik	-	RIKEN cDNA 1700021F07 gene	protein-coding
common_peak2-31402-48-50-0.298501809263319-0.626510224444022	chr8	90907530	90908585	+	0	NA	Intergenic	(TC)n|Simple_repeat|Simple_repeat	-21967	NM_012047	26992	Mm.5400	NM_012047		Brd7	BP75|CELTIX1|Ptpn13ip	bromodomain containing 7	protein-coding
unique_peak2-36813-9-11--0.395349094316936-0.344532117358383	chr3	85991897	85992498	+	0	NA	Intergenic	Intergenic	-36415	NM_001077688	80877	Mm.439825	NM_030695	ENSMUSG00000028080	Lrba	C80285|D3Ertd775e|Lab300|Lba	LPS-responsive beige-like anchor	protein-coding
unique_peak2-33965-9-13--0.617741515653384-0.459837087125828	chr12	80643302	80643780	+	0	NA	intron (NM_009014, intron 7 of 10)	intron (NM_009014, intron 7 of 10)	245203	NM_001252562	19363	Mm.341756	NM_009014	ENSMUSG00000059060	Rad51b	AI553500|R51H2|Rad51l1|mREC2	RAD51 homolog B	protein-coding
unique_peak2-32526-8-22--1.51833953810944-1.77631109801764	chr1	60343180	60344088	+	0	NA	intron (NM_173444, intron 41 of 54)	B1F|SINE|Alu	-56582	NM_030013	77951	Mm.197640	NM_030013		Cyp20a1	A930011N14Rik|Cypm	cytochrome P450, family 20, subfamily a, polypeptide 1	protein-coding
common_peak2-32420-21-56--1.26340074889851-3.15983000285279	chrX	163957982	163958833	+	0	NA	intron (NM_001290427, intron 6 of 17)	Lx2B|LINE|L1	-137776	NM_026662	110639	Mm.272955	NM_026662	ENSMUSG00000025742	Prps2	2610101M19Rik|AA589463|AI464149|Prps-2	phosphoribosyl pyrophosphate synthetase 2	protein-coding
common_peak2-23996-17-25--0.482143379936054-0.479250674391597	chr16	20140895	20141518	+	0	NA	promoter-TSS (NM_001145931)	promoter-TSS (NM_001145931)	70	NM_001145930	208146	Mm.390895	NM_001033237	ENSMUSG00000041215	Yeats2	BC042768|mKIAA1197	YEATS domain containing 2	protein-coding
unique_peak2-39347-8-15--0.994777582052429-0.771068449301683	chr9	57589441	57590105	+	0	NA	intron (NM_153799, intron 5 of 6)	intron (NM_153799, intron 5 of 6)	23894	NM_007713	102414	Mm.25720	NM_007713	ENSMUSG00000032316	Clk3	AI256811	CDC-like kinase 3	protein-coding
unique_peak1-3096-8-4-0.683294323060208-1.21878474469819	chr18	25510213	25510748	+	0	NA	intron (NM_001033532, intron 8 of 10)	intron (NM_001033532, intron 8 of 10)	182959	NM_001033532	225289	Mm.391081	NM_001033532	ENSMUSG00000033632	AW554918	4921538P22|AI461742|Kiaa1328|mKIAA1328	expressed sequence AW554918	protein-coding
unique_peak1-868-8-4-0.683294323060208-1.21878474469819	chr11	23067265	23067813	+	0	NA	Intergenic	RMER6B|LTR|ERVK	-88502	NM_001035226	103573	Mm.217547	NM_134014	ENSMUSG00000020290	Xpo1	AA420417|Crm1|Exp1	exportin 1, CRM1 homolog (yeast)	protein-coding
common_peak1-9308-18-20--0.0793982715504091-0.301029995663976	chr11	94161233	94162113	+	0	NA	intron (NM_026313, intron 5 of 10)	L1ME1|LINE|L1	21552	NM_026313	67684	Mm.30927	NM_026313	ENSMUSG00000020863	Luc7l3	3300001P08Rik|Luc7a	LUC7-like 3 (S. cerevisiae)	protein-coding
common_peak2-29050-8-7-0.00522241794757061-1.00793137938329	chr5	115514709	115515047	+	0	NA	intron (NM_029012, intron 2 of 10)	intron (NM_029012, intron 2 of 10)	43093	NM_001271591	100502825	Mm.361657	NM_001271590		Gm13826	OTTMUSG00000014624	predicted gene 13826	protein-coding
common_peak2-29087-84-134--0.141881538161805-0.423220089013176	chr5	121544954	121546151	+	0	NA	Intergenic	Intergenic	-86025	NM_011286	19894	Mm.181166	NM_011286	ENSMUSG00000029608	Rph3a	2900002P20Rik|AU022689|AW108370	rabphilin 3A	protein-coding
common_peak1-16698-29-40--0.245261924002973-0.373466121463214	chr6	17463242	17464385	+	0	NA	intron (NM_008591, intron 4 of 21)	intron (NM_008591, intron 4 of 21)	49856	NM_008591	17295	Mm.86844	NM_008591	ENSMUSG00000009376	Met	AI838057|HGF|HGFR|Par4|c-Met	met proto-oncogene	protein-coding
common_peak1-10536-31-38--0.0601635480491254-0.30392537800267	chr14	14703127	14703978	+	0	NA	Intergenic	Intergenic	90275	NM_001285780	66231	Mm.295875	NM_025435	ENSMUSG00000053453	Thoc7	Nif3l1bp1	THO complex 7 homolog (Drosophila)	protein-coding
common_peak1-12037-11-34--1.62058943269335-2.97841939682983	chr17	17838285	17838842	+	0	NA	Intergenic	Intergenic	-2342	NM_001104539	626942	Mm.404019	NM_001104539	ENSMUSG00000092120	Vmn2r90	EG626942	vomeronasal 2, receptor 90	protein-coding
unique_peak1-7014-10-2-1.77145284428761-2.09384600808989	chr8	124249858	124250402	+	0	NA	Intergenic	Intergenic	-4329	NM_020605	57340	Mm.306870	NM_020605	ENSMUSG00000025318	Jph3	JP-3|Jp3	junctophilin 3	protein-coding
unique_peak2-33511-12-19--0.673152109799724-0.546772548767014	chr11	74522091	74522827	+	0	NA	intron (NM_013625, intron 1 of 10)	intron (NM_013625, intron 1 of 10)	14901	NR_037610	18472	Mm.397111	NM_013625	ENSMUSG00000020745	Pafah1b1	LIS-1|Lis1|MMS10-U|Mdsh|Ms10u|Pafaha	platelet-activating factor acetylhydrolase, isoform 1b, subunit 1	protein-coding
common_peak2-25801-18-16-0.225456309978012-0.397739447719379	chr19	37434953	37435553	+	0	NA	Intergenic	Intergenic	-15640	NM_010615	16551	Mm.42203	NM_010615	ENSMUSG00000012443	Kif11	Eg5|Kif8|Kifl1|Knsl1	kinesin family member 11	protein-coding
common_peak1-19288-25-24-0.217993715570381-0.403610417161433	chr9	120001542	120002425	+	0	NA	intron (NM_007720, intron 1 of 1)	B4|SINE|B4	732	NM_007720	12776	Mm.442098	NM_007720	ENSMUSG00000042262	Ccr8	C-C|C-C CKR-8|CC-CKR-8|CCR-8|CKR-8|Cmkbr8|mCCR8	chemokine (C-C motif) receptor 8	protein-coding
unique_peak1-1263-13-8-0.608547029195456-0.660903317613904	chr11	117082270	117082868	+	0	NA	intron (NM_001113486, intron 2 of 11)	intron (NM_001113486, intron 2 of 11)	21594	NM_001113486	53860	Mm.38450	NM_017380	ENSMUSG00000059248	Sept9	MSF1|Msf|PNUTL4|Sint1	septin 9	protein-coding
common_peak2-27730-32-57--0.578888975907912-1.03825765497309	chr3	123508472	123509386	+	0	NA	Intergenic	Intergenic	-115159	NR_121616	83398	Mm.443908	NM_031186	ENSMUSG00000027977	Ndst3	4921531K01Rik|4930511P15Rik|N-HSST 3|NDST-3	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	protein-coding
common_peak1-16155-15-6-1.20480982849805-1.32521814697968	chr5	76884552	76885252	+	0	NA	Intergenic	Intergenic	-28200	NR_033501	639545	Mm.478255	NR_033501		Gm7271	EG639545	predicted gene 7271	pseudo
common_peak2-23177-60-41-0.961974438841771-3.32626477626167	chr15	38452277	38453450	+	0	NA	Intergenic	Intergenic	-3842	NM_018745	54375	Mm.250214	NM_018745	ENSMUSG00000037458	Azin1	1700085L02Rik|AI414949|Oazi|Oazin	antizyme inhibitor 1	protein-coding
unique_peak2-38542-4-5--0.608423014574403-0.909929411522249	chr7	49278702	49279093	+	0	NA	intron (NM_001105056, intron 5 of 5)	intron (NM_001105056, intron 5 of 5)	35454	NM_001105056	628444	Mm.469901	NM_001105056	ENSMUSG00000092032	Vmn2r59	EG628444	vomeronasal 2, receptor 59	protein-coding
unique_peak2-34259-4-5--0.608423014574403-0.909929411522249	chr13	63303650	63303990	+	0	NA	intron (NM_001289926, intron 10 of 15)	B1_Mm|SINE|Alu	-37518	NR_110520	72061	Mm.188105	NM_028079	ENSMUSG00000021458	2010111I01Rik	2300006M17Rik|AP-O|Aopep	RIKEN cDNA 2010111I01 gene	protein-coding
unique_peak2-35325-9-12--0.510826311736872-0.394412252720706	chr17	21475567	21475947	+	0	NA	Intergenic	L1Md_F3|LINE|L1	24776	NM_134200	171234	Mm.405416	NM_134200	ENSMUSG00000058030	Vmn1r237	V1rf3|Vfrf3	vomeronasal 1 receptor 237	protein-coding
unique_peak1-3616-14-1-2.89921616035764-3.91338994363176	chr19	34262365	34263176	+	0	NA	Intergenic	Intergenic	-3990	NM_029682	76630	Mm.130952	NM_029682	ENSMUSG00000024776	Stambpl1	1700095N21Rik|8230401J17Rik|ALMalpha|AMSH-FP	STAM binding protein like 1	protein-coding
common_peak1-8120-13-6-0.971117108580164-1.01572999746118	chr1	184344732	184345450	+	0	NA	intron (NM_173378, intron 1 of 17)	intron (NM_173378, intron 1 of 17)	5793	NM_173378	209456	Mm.287450	NM_173378	ENSMUSG00000026510	Trp53bp2	53BP2|AI746547|ASPP2|PPP1R13A|Tp53bp2|X98550	transformation related protein 53 binding protein 2	protein-coding
unique_peak2-34615-3-9--1.73591118484664-1.57096726280955	chr14	75754300	75754545	+	0	NA	Intergenic	Intergenic	70242	NM_026083	67302	Mm.74704	NM_026083	ENSMUSG00000022000	Zc3h13	2600010B19Rik|3110050K21Rik|4930570G11Rik|C87618	zinc finger CCCH type containing 13	protein-coding
unique_peak2-38544-2-7--1.91745425626332-1.45399745587252	chr7	49336124	49336553	+	0	NA	Intergenic	Lx6|LINE|L1	-21987	NM_001105056	628444	Mm.469901	NM_001105056	ENSMUSG00000092032	Vmn2r59	EG628444	vomeronasal 2, receptor 59	protein-coding
common_peak1-15661-13-9-0.456543935750406-0.53895475198017	chr4	136122746	136123427	+	0	NA	intron (NM_133872, intron 8 of 18)	intron (NM_133872, intron 8 of 18)	35552	NM_133872	99982	Mm.28540	NM_133872	ENSMUSG00000036940	Kdm1a	1810043O07Rik|AA408884|Aof2|D4Ertd478e|Kdm1|Lsd1|mKIAA0601	lysine (K)-specific demethylase 1A	protein-coding
common_peak2-30578-8-12--0.695217300193522-0.475924844171029	chr7	80206181	80206845	+	0	NA	Intergenic	Intergenic	40441	NR_046024	625243	Mm.261798	NR_046024		Gm6567	-	predicted gene 6567	ncRNA
common_peak2-23974-16-12-0.417823924126969-0.489164546851866	chr16	17508547	17509363	+	0	NA	promoter-TSS (NM_025808)	promoter-TSS (NM_025808)	-109	NM_025808	66863	Mm.161726	NM_025808	ENSMUSG00000022761	Lztr1	1200003E21Rik|AI591627|AW550890	leucine-zipper-like transcriptional regulator, 1	protein-coding
unique_peak1-5992-9-0-3.18961340640422-3.01029995663981	chr6	99358781	99359381	+	0	NA	intron (NM_053202, intron 1 of 18)	intron (NM_053202, intron 1 of 18)	26258	NM_053202	108655	Mm.234965	NM_053202	ENSMUSG00000030067	Foxp1	3110052D19Rik|4932443N09Rik|AI461938|AW494214	forkhead box P1	protein-coding
common_peak1-13935-38-25-0.871012941157439-1.90173050117047	chr2	90499733	90501124	+	0	NA	Intergenic	ID_B1|SINE|B4	-16944	NM_021512	59015	Mm.24532	NM_021512	ENSMUSG00000051329	Nup160	160kDa|2810011M03Rik|AA414952|AU020188|Gtl-13|Gtl1-13|Gtl13|mKIAA0197	nucleoporin 160	protein-coding
unique_peak1-3531-10-0-3.35641534500877-3.31132995230379	chr19	21040524	21041079	+	0	NA	Intergenic	Intergenic	-12109	NM_028953	13409	Mm.219585	NM_028953	ENSMUSG00000024749	Tmc1	4933416G09Rik|Beethoven|Bth|CWEA1|dn	transmembrane channel-like gene family 1	protein-coding
common_peak1-11050-10-39--1.96551274987859-4.28341153583535	chr15	53346331	53346900	+	0	NA	intron (NM_177225, intron 4 of 4)	ORR1D1|LTR|MaLR	-168877	NM_010162	14042	Mm.309395	NM_010162		Ext1	AA409028	exostoses (multiple) 1	protein-coding
unique_peak2-35143-4-8--1.19338551529556-1.21878474469819	chr16	31235503	31235944	+	0	NA	intron (NR_035427, intron 1 of 2)	intron (NR_035427, intron 1 of 2)	-34399	NM_030138	78618	Mm.274646	NM_030138	ENSMUSG00000049076	Acap2	4832442G16|9530039J15Rik|CNT-B2|Centb2|mKIAA0041	ArfGAP with coiled-coil, ankyrin repeat and PH domains 2	protein-coding
unique_peak1-5872-12-2-2.06381348436648-2.79529063155376	chr6	86075258	86075872	+	0	NA	Intergenic	Intergenic	47523	NM_001271859	11519	Mm.104155	NM_013458		Add2	2900072M03Rik|add97	adducin 2 (beta)	protein-coding
common_peak1-11080-13-18--0.469455482805817-0.409888142029227	chr15	59081115	59081832	+	0	NA	Intergenic	PB1D10|SINE|Alu	-57030	NR_045613	100416830	Mm.490788	NR_045613	ENSMUSG00000098528	Zfp572	4930472F24Rik	zinc finger protein 572	pseudo
common_peak1-8188-38-38-0.286050440436282-0.554098881286537	chr10	82082769	82083947	+	0	NA	intron (NM_001135567, intron 2 of 2)	intron (NM_001135567, intron 2 of 2)	2615	NM_001135569	544717	Mm.334867	NM_001135567	ENSMUSG00000063320	1190007I07Rik	-	RIKEN cDNA 1190007I07 gene	protein-coding
common_peak2-20282-15-26--0.742722751607812-0.823046386575433	chr1	191397315	191397800	+	0	NA	Intergenic	L2a|LINE|L2	114408	NM_001081363	108000	Mm.129746	NM_001081363	ENSMUSG00000026605	Cenpf	6530404A22Rik|AI325968|CENF|Lek1|PRO1779|mitosin	centromere protein F	protein-coding
unique_peak1-4217-13-1-2.77847203063777-3.64038867156802	chr2	120499938	120500700	+	0	NA	Intergenic	Intergenic	56934	NM_026891	68968	Mm.2289	NM_026891	ENSMUSG00000027284	Cdan1	1500015A01Rik|AI448026|AW492297|CDA-I|CDA1|CDAI	congenital dyserythropoietic anemia, type I (human)	protein-coding
common_peak2-23921-17-27--0.589058583852566-0.604689589251113	chr16	10313470	10314032	+	0	NA	intron (NM_007929, intron 1 of 4)	intron (NM_007929, intron 1 of 4)	310	NM_007929	13731	Mm.246009	NM_007929	ENSMUSG00000022505	Emp2	XMP	epithelial membrane protein 2	protein-coding
common_peak1-14093-30-21-0.710243790854576-1.16836819221353	chr2	124609609	124610384	+	0	NA	Intergenic	ORR1E-int|LTR|MaLR	130679	NM_199239	214968	Mm.330536	NM_172537	ENSMUSG00000027200	Sema6d	1110067B02Rik|AA409156|D330011G23|mKIAA1479	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D	protein-coding
common_peak2-25132-16-11-0.533301141546906-0.58239619684445	chr18	40185972	40186398	+	0	NA	Intergenic	Intergenic	192868	NM_023311	67180	Mm.270382	NM_023311	ENSMUSG00000024487	Yipf5	2610311I19Rik|AA408236|Yip1a	Yip1 domain family, member 5	protein-coding
common_peak2-24670-31-27-0.41788374875552-0.64171680596148	chr17	36931318	36932419	+	0	NA	Intergenic	Lx7|LINE|L1	-17252	NM_201611	399549	Mm.329034	NM_201611	ENSMUSG00000037130	H2-M10.6	-	histocompatibility 2, M region locus 10.6	protein-coding
unique_peak1-1306-7-4-0.477162735410827-1.09384600808989	chr11	120467748	120468090	+	0	NA	3' UTR (NM_025389, exon 3 of 3)	3' UTR (NM_025389, exon 3 of 3)	-1872	NM_153288	208990	Mm.29444	NM_153288	ENSMUSG00000044034	Npb	-	neuropeptide B	protein-coding
common_peak1-8733-18-19--0.00900894365901106-0.306598483909153	chr11	3289782	3290517	+	0	NA	intron (NM_010718, intron 2 of 15)	intron (NM_010718, intron 2 of 15)	-18754	NM_173053	16886	Mm.124176	NM_010718	ENSMUSG00000020451	Limk2	Limk-2	LIM motif-containing protein kinase 2	protein-coding
common_peak2-29453-14-28--0.958764834769927-1.16796998271031	chr6	22360799	22361584	+	0	NA	Intergenic	Intergenic	-55110	NM_138587	27999	Mm.490307	NM_138587	ENSMUSG00000029672	Fam3c	D6Wsu176e|Ilei	family with sequence similarity 3, member C	protein-coding
common_peak1-11040-12-4-1.32684789020028-2.04196296489515	chr15	44412963	44413480	+	0	NA	intron (NM_138674, intron 68 of 76)	intron (NM_138674, intron 68 of 76)	-37966	NM_019480	55960	Mm.287896	NM_019480	ENSMUSG00000022339	Ebag9	AI835379|Rcas1	estrogen receptor-binding fragment-associated gene 9	protein-coding
unique_peak1-4917-7-0-2.79909083029819-2.40823996531185	chr4	55514788	55515290	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	30308	NM_010637	16600	Mm.4325	NM_010637	ENSMUSG00000003032	Klf4	EZF|Gklf|Zie	Kruppel-like factor 4 (gut)	protein-coding
unique_peak1-3782-14-1-2.89921616035764-3.91338994363176	chr19	55799921	55800503	+	0	NA	Intergenic	L1MC2|LINE|L1	-16088	NM_001142922	21416	Mm.139815	NM_009333	ENSMUSG00000024985	Tcf7l2	TCF4B|TCF4E|Tcf-4|Tcf4|mTcf-4B|mTcf-4E	transcription factor 7 like 2, T cell specific, HMG box	protein-coding
common_peak1-10514-14-12-0.198776442216552-0.373562084705529	chr14	7851174	7851935	+	0	NA	intron (NM_001164727, intron 2 of 6)	intron (NM_001164727, intron 2 of 6)	8409	NM_001164727	100038847	Mm.443041	NM_001164727	ENSMUSG00000093985	Gm10406	ENSMUSG00000072735	predicted gene 10406	protein-coding
common_peak2-27025-26-49--0.715957097616262-1.30310500416066	chr2	174075893	174077460	+	0	NA	Intergenic	(TAGA)n|Simple_repeat|Simple_repeat	15950	NR_029646	723906		NR_029646	miRBase:MI0000394	Mir296	Mirn296|mmu-mir-296	microRNA 296	ncRNA
common_peak2-23068-9-5-0.604650905683064-1.21398586181642	chr14	73253627	73253996	+	0	NA	Intergenic	MER2|DNA|MER2_type	-144001	NM_207636	319448	Mm.205421	NM_207636	ENSMUSG00000033487	Fndc3a	1700094E19Rik|D14Ertd453e|F730017H24Rik|Fndc3|sys	fibronectin type III domain containing 3A	protein-coding
common_peak2-20849-26-21-0.468467473521165-0.647723624534446	chr11	62602061	62603291	+	0	NA	intron (NM_138949, intron 1 of 5)	intron (NM_138949, intron 1 of 5)	243	NM_138949	192651	Mm.168530	NM_138949	ENSMUSG00000047342	Zfp286	BC027023	zinc finger protein 286	protein-coding
common_peak2-20631-8-12--0.695217300193522-0.475924844171029	chr10	80621518	80621970	+	0	NA	intron (NM_021501, intron 2 of 10)	intron (NM_021501, intron 2 of 10)	8721	NM_021501	59004	Mm.34428	NM_021501		Pias4	PIASY|Pias-gamma|Piasg	protein inhibitor of activated STAT 4	protein-coding
unique_peak1-4825-8-1-2.00522241794757-2.05605744720049	chr3	145455365	145455787	+	0	NA	intron (NM_026993, intron 1 of 5)	intron (NM_026993, intron 1 of 5)	33920	NM_026993	69219	Mm.234247	NM_026993	ENSMUSG00000028194	Ddah1	2410006N07Rik|2510015N06Rik|AI987801|AW050362	dimethylarginine dimethylaminohydrolase 1	protein-coding
unique_peak1-777-20-7-1.48807478459119-2.07034318903805	chr10	128964540	128965256	+	0	NA	TTS (NM_146930)	TTS (NM_146930)	1613	NM_146930	258932	Mm.377754	NM_146930	ENSMUSG00000047626	Olfr791	MOR114-1	olfactory receptor 791	protein-coding
common_peak2-26329-51-66-0.00883463514480098-0.302662697069732	chr2	34753771	34754680	+	0	NA	intron (NM_028716, intron 12 of 14)	intron (NM_028716, intron 12 of 14)	15271	NM_028716	74016	Mm.65691	NM_028716	ENSMUSG00000026873	Phf19	3110009G19Rik|3321402G02Rik	PHD finger protein 19	protein-coding
common_peak2-32117-66-163--0.839068340192243-4.65099251295694	chr9	102717403	102719149	+	0	NA	Intergenic	Lx7|LINE|L1	-18974	NM_013649	20187	Mm.335391	NM_013649	ENSMUSG00000032547	Ryk	AW536699|ERK-3|Vik	receptor-like tyrosine kinase	protein-coding
common_peak2-28341-19-15-0.402687326661686-0.519193887192487	chr4	135292520	135293106	+	0	NA	intron (NM_178257, intron 3 of 6)	intron (NM_178257, intron 3 of 6)	8739	NM_178257	230828	Mm.261647	NM_178257		Il22ra1	9130219A07Rik|ENSMUSG00000073746|IL-22R|Il22r	interleukin 22 receptor, alpha 1	protein-coding
common_peak1-13953-28-48--0.561750724293746-0.907712525274296	chr2	91202038	91203336	+	0	NA	intron (NM_175123, intron 3 of 8)	intron (NM_175123, intron 3 of 8)	82112	NM_175123	228356	Mm.386861	NM_175123	ENSMUSG00000040591	1110051M20Rik	AI586322	RIKEN cDNA 1110051M20 gene	protein-coding
common_peak2-24034-16-13-0.310908720210457-0.417187467413082	chr16	24136099	24136820	+	0	NA	Intergenic	Intergenic	-147761	NM_009744	12053	Mm.347398	NM_009744	ENSMUSG00000022508	Bcl6	Bcl5	B cell leukemia/lymphoma 6	protein-coding
common_peak2-25317-12-21--0.810655633549659-0.713635438203849	chr18	75370206	75370916	+	0	NA	intron (NM_027727, intron 14 of 16)	intron (NM_027727, intron 14 of 16)	86410	NR_045394	100503117	Mm.250517	NR_045393		2010010A06Rik	5033420E22Rik	RIKEN cDNA 2010010A06 gene	ncRNA
common_peak2-22649-18-18-0.0649916377847664-0.323898164595606	chr13	93772222	93772803	+	0	NA	Intergenic	Intergenic	-70747	NR_036451	100502942	Mm.441946	NM_177623		Gm4814	C920025J10|EG218444	predicted gene 4814	ncRNA
unique_peak1-1142-9-1-2.18961340640422-2.31132995230379	chr11	97338461	97339037	+	0	NA	intron (NM_021493, intron 15 of 18)	intron (NM_021493, intron 15 of 18)	22905	NM_001289118	100141474	Mm.482426	NM_001289118		4933428G20Rik	-	RIKEN cDNA 4933428G20 gene	protein-coding
common_peak1-18247-17-26--0.53659116395843-0.538442145997695	chr8	33641452	33642312	+	0	NA	Intergenic	Lx5|LINE|L1	379515	NR_046039	666589	Mm.367675	NR_046039		Gm8179	EG666589	predicted gene 8179	ncRNA
unique_peak1-1286-11-5-0.923731083530457-1.477227296591	chr11	118413463	118414052	+	0	NA	intron (NM_001285436, intron 3 of 13)	intron (NM_001285436, intron 3 of 13)	75483	NM_172573	217364	Mm.473963	NM_172573	ENSMUSG00000033857	Engase	C130099A03|D230014K01Rik	endo-beta-N-acetylglucosaminidase	protein-coding
common_peak1-12728-20-14-0.581184188982674-0.690311289528838	chr18	53524159	53524889	+	0	NA	intron (NM_029394, intron 3 of 6)	RSINE1|SINE|B4	53137	NM_008908	19038	Mm.4587	NM_008908	ENSMUSG00000024538	Ppic	CyP-20c	peptidylprolyl isomerase C	protein-coding
common_peak2-22554-7-8--0.370834171144123-1.00793137938329	chr13	62652785	62653136	+	0	NA	intron (NM_175252, intron 1 of 6)	intron (NM_175252, intron 1 of 6)	6999	NM_175252	77117	Mm.470091	NM_175252		Zfp934	6720457D02Rik	zinc finger protein 934	protein-coding
common_peak1-11113-44-31-0.821892834568535-1.99427374707394	chr15	62138769	62140166	+	0	NA	Intergenic	Intergenic	-88461	NR_003523	67552	Mm.484027	NM_026230		H2afy3	4933432H23Rik	H2A histone family, member Y3	pseudo
common_peak2-31178-16-28--0.73971735285951-0.890873221665474	chr8	46868392	46869401	+	0	NA	intron (NM_172752, intron 12 of 22)	intron (NM_172752, intron 12 of 22)	35755	NR_045739	319940	Mm.441720	NR_045739	ENSMUSG00000085440	Sorbs2os	D330022K07Rik	sorbin and SH3 domain containing 2, opposite strand	ncRNA
common_peak1-19392-17-19--0.103631756682325-0.301029995663974	chrX	48108751	48109363	+	0	NA	Intergenic	ORR1A4-int|LTR|MaLR	-85556	NM_133729	70415	Mm.391246	NM_133729		2610018G03Rik	Mst4	RIKEN cDNA 2610018G03 gene	protein-coding
unique_peak1-3405-8-2-1.42025991722641-1.65811743852845	chr19	5067809	5068297	+	0	NA	promoter-TSS (NM_054042)	promoter-TSS (NM_054042)	-25	NM_054042	70445	Mm.29597	NM_054042	ENSMUSG00000056481	Cd248	2610111G01Rik|AI842296|Cd164l1|Tem1	CD248 antigen, endosialin	protein-coding
common_peak2-30405-22-24-0.00342791531268016-0.305461879681376	chr7	35117733	35118894	+	0	NA	Intergenic	Intergenic	-47685	NM_172741	233103	Mm.491097	NM_172741	ENSMUSG00000066571	4931406P16Rik	AA553327|mKIAA0355	RIKEN cDNA 4931406P16 gene	protein-coding
common_peak2-23061-27-25-0.291106232754144-0.488172498216822	chr14	70765951	70767109	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-15299	NM_001135151	213053	Mm.270647	NM_144808	ENSMUSG00000022094	Slc39a14	FAD-123|ZIP-14|Zip14|fad123	solute carrier family 39 (zinc transporter), member 14	protein-coding
common_peak2-30865-10-7-0.356415345008769-1.12966497611638	chr7	139285535	139285973	+	0	NA	intron (NM_018867, intron 4 of 13)	intron (NM_018867, intron 4 of 13)	60670	NM_018867	55987	Mm.471654	NM_018867	ENSMUSG00000030862	Cpxm2	4632435C11Rik|CPX-2|Cpx2	carboxypeptidase X 2 (M14 family)	protein-coding
common_peak1-13410-46-51-0.19755622510771-0.459662873060263	chr19	53037843	53038837	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	40669	NR_030678	100043450	Mm.145594	NR_030678		AA387883	-	expressed sequence AA387883	ncRNA
common_peak2-26075-28-30-0.0987628094345876-0.332062764479303	chr2	101678184	101679152	+	0	NA	intron (NM_001110849, intron 1 of 9)	B3A|SINE|B2	469	NM_001110849	72446	Mm.24138	NM_175181	ENSMUSG00000032841	Prr5l	2600010E01Rik|4833411O04Rik|Protor-2|Protor2	proline rich 5 like	protein-coding
common_peak1-8693-29-14-1.20539948500659-2.32006591355686	chr11	58866705	58867843	+	0	NA	exon (NM_199152, exon 52 of 90)	exon (NM_199152, exon 52 of 90)	75679	NM_053168	94091	Mm.248049	NM_053168	ENSMUSG00000020455	Trim11	-	tripartite motif-containing 11	protein-coding
unique_peak2-35088-5-6--0.511735258063458-0.947717972411649	chr16	17910975	17911334	+	0	NA	intron (NM_001081633, intron 1 of 9)	intron (NM_001081633, intron 1 of 9)	287	NM_022408	27886	Mm.256480	NM_022408	ENSMUSG00000003527	Dgcr14	AI462402|D16H22S1269E|Dgcr1|Dgsi|ES2|Es2el	DiGeorge syndrome critical region gene 14	protein-coding
common_peak1-13223-45-58--0.0222850240169699-0.301029995663982	chr19	24555163	24556945	+	0	NA	intron (NM_008846, intron 1 of 14)	intron (NM_008846, intron 1 of 14)	-4090	NM_026520	68034	Mm.440181	NM_026520		Fam122a	2410124L17Rik|2900009I07Rik|ENSMUSG00000051082|Gm9849	family with sequence similarity 122, member A	protein-coding
common_peak1-13413-12-9-0.326847890200276-0.459837087125828	chr19	53142828	53143366	+	0	NA	Intergenic	RSINE1|SINE|B4	-7645	NR_045320	78457	Mm.76932	NR_045320		1700054A03Rik	-	RIKEN cDNA 1700054A03 gene	ncRNA
common_peak2-28391-6-6--0.241956811677302-0.947717972411649	chr4	139536578	139536983	+	0	NA	Intergenic	Intergenic	-12839	NM_173427	242721	Mm.60400	NM_173427	ENSMUSG00000078234	Klhdc7a	B230308G19Rik	kelch domain containing 7A	protein-coding
common_peak2-22636-26-28-0.0699180970308904-0.316008636696532	chr13	91370443	91371527	+	0	NA	Intergenic	Intergenic	-7393	NM_025770	66795	Mm.235385	NM_025770	ENSMUSG00000021619	Atg10	5330424L23Rik|5430428K15Rik|AI852123|APG10|Agp10|Apg10l|Apg10p|Atg10l	autophagy related 10	protein-coding
common_peak2-28717-14-9-0.577288065470282-0.630231561310125	chr5	35740270	35740823	+	0	NA	Intergenic	CpG	8780	NM_010445	15371	Mm.358606	NM_010445	ENSMUSG00000067438	Hmx1	Nkx5-3	H6 homeobox 1	protein-coding
common_peak1-10763-22-15-0.647284105087405-0.849699271740893	chr14	70343534	70344528	+	0	NA	intron (NM_028560, intron 3 of 6)	intron (NM_028560, intron 3 of 6)	103817	NM_028526	73523	Mm.23509	NM_028526	ENSMUSG00000022085	Pebp4	PEBP-4	phosphatidylethanolamine binding protein 4	protein-coding
unique_peak2-37354-5-16--1.79184317725619-1.61682445937017	chr4	134245054	134245685	+	0	NA	intron (NM_207237, intron 1 of 11)	L1MEc|LINE|L1	14836	NM_207237	230815	Mm.18905	NM_207237	ENSMUSG00000037306	Man1c1	AI593348	mannosidase, alpha, class 1C, member 1	protein-coding
common_peak2-30203-18-14-0.406028555619833-0.532159081577619	chr7	65978272	65979076	+	0	NA	intron (NM_009728, intron 1 of 20)	intron (NM_009728, intron 1 of 20)	65102	NM_009728	11982	Mm.135129	NM_009728	ENSMUSG00000025324	Atp10a	Atp10c|pfatp	ATPase, class V, type 10A	protein-coding
common_peak1-8461-31-43--0.234192947824174-0.398838069828027	chr10	80051102	80052203	+	0	NA	intron (NM_145421, intron 1 of 4)	intron (NM_145421, intron 1 of 4)	1434	NM_145421	216169	Mm.29802	NM_145421	ENSMUSG00000003346	Abhd17a	1700013O15Rik|BC005632|D10Bwg1364e|Fam108a	abhydrolase domain containing 17A	protein-coding
common_peak1-14359-24-29--0.113680692840802-0.304839791830752	chr2	167014584	167015558	+	0	NA	promoter-TSS (NM_008420)	promoter-TSS (NM_008420)	-753	NM_008420	16500	Mm.205341	NM_008420		Kcnb1	Kcr1-1|Kv2.1|Shab	potassium voltage gated channel, Shab-related subfamily, member 1	protein-coding
unique_peak1-4359-12-0-3.64877598508764-4.21441993929574	chr2	156410708	156411254	+	0	NA	Intergenic	Intergenic	28177	NR_040372	100504350	Mm.94426	NR_040372	ENSMUSG00000086118	Gm14169	OTTMUSG00000015869	predicted gene 14169	ncRNA
unique_peak1-2239-12-1-2.64877598508764-3.36932189928148	chr15	76337916	76338171	+	0	NA	intron (NM_010046, intron 1 of 16)	intron (NM_010046, intron 1 of 16)	4205	NM_010046	13350	Mm.22633	NM_010046	ENSMUSG00000022555	Dgat1	ARAT|C75990|D15Ertd23e|Dgat	diacylglycerol O-acyltransferase 1	protein-coding
common_peak1-16114-14-10-0.439784541720347-0.519648556297791	chr5	66040361	66041150	+	0	NA	intron (NM_001081321, intron 13 of 31)	Lx9|LINE|L1	48340	NM_001081321	71521	Mm.278974	NM_027818	ENSMUSG00000029202	Pds5a	9030416H16Rik|E230024D05Rik|mKIAA0648	PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	protein-coding
unique_peak1-5379-8-0-3.00522241794757-2.70926996097583	chr5	99432084	99432632	+	0	NA	intron (NM_008926, intron 2 of 18)	L1MEg|LINE|L1	33740	NM_008926	19092	Mm.263002	NM_008926	ENSMUSG00000029334	Prkg2	AW212535|CGKII|Prkgr2|cGK-II	protein kinase, cGMP-dependent, type II	protein-coding
common_peak1-17142-32-20-0.886774596440899-1.65365064026544	chr6	116634424	116635515	+	0	NA	Intergenic	Intergenic	-11115	NM_178045	213391	Mm.257931	NM_178045	ENSMUSG00000042129	Rassf4	3830411C14Rik|AD037|AI586137	Ras association (RalGDS/AF-6) domain family member 4	protein-coding
unique_peak2-39225-1-6--2.43441193227435-1.56314192529759	chr8	110902162	110902525	+	0	NA	Intergenic	Intergenic	206234	NR_077224	109215	Mm.65282	NR_077224		3010033K07Rik	-	RIKEN cDNA 3010033K07 gene	ncRNA
common_peak2-21194-14-8-0.729291158915332-0.771068449301682	chr11	60536134	60536597	+	0	NA	intron (NM_022009, intron 5 of 29)	(CCCTG)n|Simple_repeat|Simple_repeat	4358	NM_022009	14248	Mm.339755	NM_022009	ENSMUSG00000002812	Flii	3632430F08Rik|Fli1|Fliih	flightless I homolog (Drosophila)	protein-coding
common_peak1-18545-10-22--1.16714661104824-1.30248952876293	chr8	95142087	95142559	+	0	NA	Intergenic	Intergenic	-55865	NM_022428	64379	Mm.137247	NM_022428		Irx6	-	Iroquois related homeobox 6 (Drosophila)	protein-coding
unique_peak2-38462-0-6--3.64748585253182-1.56314192529759	chr7	28833142	28833367	+	0	NA	intron (NM_011874, intron 3 of 10)	intron (NM_011874, intron 3 of 10)	1857	NM_011874	23996	Mm.29582	NM_011874	ENSMUSG00000030603	Psmc4	CIP21|MIP224	proteasome (prosome, macropain) 26S subunit, ATPase, 4	protein-coding
common_peak1-15660-16-12-0.417823924126969-0.489164546851866	chr4	136020981	136021675	+	0	NA	Intergenic	Intergenic	-4348	NM_024452	269593	Mm.485824	NM_024452	ENSMUSG00000001089	Luzp1	2700072H04Rik|AI266952|Luzp|mFLJ00226	leucine zipper protein 1	protein-coding
common_peak2-25648-19-29--0.504203268946832-0.580176690544129	chr19	10041598	10042857	+	0	NA	Intergenic	RLTR25B|LTR|ERVK	-12863	NR_073181	14319	Mm.1776	NM_010239	ENSMUSG00000024661	Fth1	FHC|Fth|HFt|MFH	ferritin heavy chain 1	protein-coding
common_peak2-24795-9-11--0.395349094316936-0.344532117358383	chr17	65884370	65884803	+	0	NA	intron (NM_001008973, intron 1 of 14)	MTB|LTR|MaLR	5536	NM_001008973	381107	Mm.141275	NM_001008973	ENSMUSG00000045036	Tmem232	E130009J12Rik|Gm940|Tes13-L|Tes13-S	transmembrane protein 232	protein-coding
common_peak2-24112-4-11--1.6084230145744-1.68134727924692	chr16	32877192	32877698	+	0	NA	promoter-TSS (NM_001159349)	promoter-TSS (NM_001159349)	-425	NM_027226	69823	Mm.12831	NM_027226	ENSMUSG00000022800	Fyttd1	2010005M05Rik|3830411L18Rik|3830421F13Rik|4933423A17Rik|AI098218|AW539567|C85190	forty-two-three domain containing 1	protein-coding
common_peak1-19506-25-11-1.27688740462395-2.12469164491494	chrX	165299172	165300306	+	0	NA	intron (NM_009707, intron 1 of 12)	B1_Mur1|SINE|Alu	66708	NM_009707	11856	Mm.441810	NM_009707	ENSMUSG00000031355	Arhgap6	AI504284|RhoGAPX-1	Rho GTPase activating protein 6	protein-coding
unique_peak1-6946-14-1-2.89921616035764-3.91338994363176	chr8	111184688	111185442	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-53479	NM_007496	11906	Mm.416972	NM_007496	ENSMUSG00000038872	Zfhx3	A230102L03Rik|Atbf1|WBP9|mKIAA4228	zinc finger homeobox 3	protein-coding
common_peak1-9261-25-17-0.691924903902794-0.98872314135509	chr11	86992376	86993623	+	0	NA	intron (NM_197987, intron 13 of 23)	intron (NM_197987, intron 13 of 23)	52422	NM_197987	68729	Mm.17436	NM_197987	ENSMUSG00000018548	Trim37	1110032A10Rik|2810004E07Rik|AI848587|AU043018|MUL|TEF3|mKIAA0898	tripartite motif-containing 37	protein-coding
common_peak1-15010-8-9--0.316705676939792-1.03275496310833	chr3	113243975	113244484	+	0	NA	Intergenic	Intergenic	33451	NM_007446	11722	Mm.439727	NM_007446	ENSMUSG00000074264	Amy1	Amy-1|Amy1a|C030014B17Rik	amylase 1, salivary	protein-coding
unique_peak1-3248-8-0-3.00522241794757-2.70926996097583	chr18	64645476	64645987	+	0	NA	intron (NM_007998, intron 1 of 10)	intron (NM_007998, intron 1 of 10)	2989	NM_007998	14151	Mm.1070	NM_007998	ENSMUSG00000024588	Fech	AI894116|Fcl|fch	ferrochelatase	protein-coding
common_peak1-11372-18-42--1.11334560347375-2.03367508793052	chr15	95790361	95791233	+	0	NA	intron (NM_001253813, intron 17 of 20)	intron (NM_001253813, intron 17 of 20)	119186	NR_003627	402773	Mm.210567	NM_001033483		D030018L15Rik	-	nuclear receptor coactivator 2 pseudogene	pseudo
unique_peak1-2208-18-2-2.7279566505072-4.01305082679061	chr15	68154878	68155636	+	0	NA	Intergenic	Lx6|LINE|L1	13815	NR_029534	387226		NR_029534	miRBase:MI0000145	Mir30b	Mirn30b|mmu-mir-30b	microRNA 30b	ncRNA
common_peak2-19800-28-40--0.304592884796621-0.447010559430123	chr1	87755709	87756787	+	0	NA	Intergenic	Intergenic	-34837	NM_022417	64294	Mm.29870	NM_022417	ENSMUSG00000026223	Itm2c	3110038L02Rik|BRI3|Bricd2c|E25|E25C|ITM3	integral membrane protein 2C	protein-coding
common_peak1-9737-24-41--0.599107520011044-0.83607543869935	chr12	44209170	44210190	+	0	NA	Intergenic	Intergenic	1101375	NM_013760	27362	Mm.27432	NM_013760	ENSMUSG00000014905	Dnajb9	AA408011|AA673251|AA673481|AW556981|ERdj4|Mdg1|mDj7	DnaJ (Hsp40) homolog, subfamily B, member 9	protein-coding
common_peak2-24476-13-17--0.391452970804544-0.364171515310935	chr17	24566898	24567777	+	0	NA	intron (NM_010023, intron 2 of 6)	B4A|SINE|B4	3709	NM_010023	13177	Mm.291743	NM_010023	ENSMUSG00000024132	Eci1	Dci|eci	enoyl-Coenzyme A delta isomerase 1	protein-coding
common_peak2-28372-6-11--1.01956439034085-1.32595962126035	chr4	137643837	137644176	+	0	NA	intron (NM_172703, intron 5 of 34)	intron (NM_172703, intron 5 of 34)	-75118	NR_105825	102466907		NR_105825		Mir6399	mmu-mir-6399	microRNA mir-6399	ncRNA
common_peak2-24771-26-27-0.120544170100858-0.335332249061431	chr17	56585021	56585805	+	0	NA	intron (NM_001252456, intron 6 of 28)	intron (NM_001252456, intron 6 of 28)	16231	NM_001252456	19280	Mm.258771	NM_011218	ENSMUSG00000013236	Ptprs	AL022616|PTP|PTP-NU3|PTPNU-3|PTPsigma|Ptpt9|R-PTP-S|RPTPsigma	protein tyrosine phosphatase, receptor type, S	protein-coding
unique_peak2-33871-1-10--3.08648862885404-2.57096726280955	chr12	23605587	23606024	+	0	NA	Intergenic	Intergenic	615108	NR_015504	69732	Mm.391403	NM_028362	ENSMUSG00000073164	2410018L13Rik	2810480C08Rik	RIKEN cDNA 2410018L13 gene	ncRNA
common_peak2-32086-16-12-0.417823924126969-0.489164546851866	chr9	96753947	96754595	+	0	NA	intron (NM_001289646, intron 3 of 6)	intron (NM_001289646, intron 3 of 6)	35622	NM_001289646	235534	Mm.233031	NM_153420	ENSMUSG00000043587	Pxylp1	9430094M07Rik|Acpl2|BB177120|C130099A20Rik	2-phosphoxylose phosphatase 1	protein-coding
unique_peak1-4460-7-1-1.79909083029819-1.80617997398389	chr2	175805133	175805501	+	0	NA	intron (NR_040256, intron 4 of 4)	RLTR45-int|LTR|ERVK	-5147	NM_001033123	13999		NM_001033123		Gm14288	OTTMUSG00000016199	predicted gene 14288	protein-coding
common_peak1-19190-43-55--0.024791736533901-0.301029995663988	chr9	99629208	99630666	+	0	NA	Intergenic	Intergenic	-12251	NM_001194921	56492	Mm.386784	NM_019815		Cldn18	-	claudin 18	protein-coding
unique_peak2-33291-9-16--0.897849434846119-0.732381977911291	chr11	101465427	101466128	+	0	NA	Intergenic	Intergenic	-6237	NM_001256318	666331	Mm.303457	NM_001256318		LOC666331	-	uncharacterized LOC666331	protein-coding
common_peak2-26977-39-49--0.0280949428555708-0.301029995663988	chr2	167492073	167493366	+	0	NA	Intergenic	MTD-int|LTR|MaLR	-5675	NM_145538	407243	Mm.4863	NM_145538		Tmem189	AI840826|Kua	transmembrane protein 189	protein-coding
common_peak2-23525-3-4--0.73591118484664-0.864171920961574	chr15	77306659	77306884	+	0	NA	promoter-TSS (NM_177744)	promoter-TSS (NM_177744)	-706	NM_177744	245282	Mm.390820	NM_177744	ENSMUSG00000050982	Apol10a	9030421J09Rik	apolipoprotein L 10A	protein-coding
common_peak2-27080-64-152--0.791941440984049-4.05223146105427	chr3	51559526	51561553	+	0	NA	intron (NM_001004176, intron 2 of 4)	intron (NM_001004176, intron 2 of 4)	95424	NM_174995	211666	Mm.24679	NM_174995	ENSMUSG00000074604	Mgst2	GST2|MGST-II	microsomal glutathione S-transferase 2	protein-coding
common_peak1-8194-57-48-0.65132319596372-1.77539305996384	chr10	128302483	128304319	+	0	NA	intron (NM_025364, intron 9 of 10)	intron (NM_025364, intron 9 of 10)	25373	NM_010272	14561	Mm.299218	NM_010272		Gdf11	BMP-11|Bmp11	growth differentiation factor 11	protein-coding
common_peak2-29754-12-13--0.158578936969966-0.301029995663979	chr6	86585071	86585594	+	0	NA	Intergenic	Intergenic	7164	NM_026414	67855	Mm.183043	NM_026414	ENSMUSG00000033508	Asprv1	2300003P22Rik|AA986851|SASP|SASPase|Taps	aspartic peptidase, retroviral-like 1	protein-coding
common_peak2-30719-18-15-0.312919151228352-0.456667090758524	chr7	113461352	113462038	+	0	NA	Intergenic	MTD|LTR|MaLR	6347	NR_030720	668128	Mm.484022	NR_030720		Gm8989	EG668128|Gm21911	very large inducible GTPase 1 pseudogene	pseudo
unique_peak1-2231-10-4-1.03448725012141-1.5150158574804	chr15	75865847	75866420	+	0	NA	Intergenic	B1F1|SINE|Alu	-21367	NM_134087	105732	Mm.267178	NM_134087	ENSMUSG00000046761	Fam83h	AA409316	family with sequence similarity 83, member H	protein-coding
common_peak1-18652-26-33--0.159563749091877-0.332062764479297	chr8	111743163	111744144	+	0	NA	Intergenic	Intergenic	121155	NR_002928	384864	Mm.390083	NR_002928		Gm1943	-	WD repeat domain 70 pseudogene	pseudo
unique_peak2-37786-11-15--0.491306415748387-0.435191258261915	chr5	118245334	118246022	+	0	NA	Intergenic	L2b|LINE|L2	-71450	NM_008712	18125	Mm.44249	NM_008712	ENSMUSG00000029361	Nos1	2310005C01Rik|NO|NOS-I|Nos-1|bNOS|nNOS	nitric oxide synthase 1, neuronal	protein-coding
common_peak1-9279-46-43-0.438564324611504-0.913104017362127	chr11	88047691	88048786	+	0	NA	Intergenic	(GGAA)n|Simple_repeat|Simple_repeat	30348	NM_001291271	64656	Mm.168680	NM_024174	ENSMUSG00000023723	Mrps23	D11Bwg1153e|MRP-S23|Rpms23|S23mt	mitochondrial ribosomal protein S23	protein-coding
unique_peak2-34772-5-9--1.02630843089322-1.21398586181642	chr15	59524144	59524643	+	0	NA	Intergenic	PB1D7|SINE|Alu	44184	NM_144549	211770	Mm.40298	NM_144549	ENSMUSG00000032501	Trib1	A530090O15Rik|TRB-1|Trb1	tribbles homolog 1 (Drosophila)	protein-coding
common_peak1-17206-30-31-0.169675409491873-0.382130460680153	chr6	125231108	125232051	+	0	NA	exon (NM_009446, exon 4 of 5)	exon (NM_009446, exon 4 of 5)	4481	NM_009446	22144	Mm.287784	NM_009446	ENSMUSG00000067702	Tuba3a	AI528779|M[a]3|Tuba3	tubulin, alpha 3A	protein-coding
unique_peak1-3981-8-2-1.42025991722641-1.65811743852845	chr2	32891321	32891839	+	0	NA	intron (NM_178888, intron 8 of 28)	B4A|SINE|B4	51144	NM_178888	99326	Mm.41290	NM_178888	ENSMUSG00000038860	Garnl3	AW120551	GTPase activating RANGAP domain-like 3	protein-coding
unique_peak1-2962-8-1-2.00522241794757-2.05605744720049	chr17	71285933	71286393	+	0	NA	Intergenic	Intergenic	53693	NM_023402	67938	Mm.261329	NM_023402		Myl12b	1500001M02Rik|C77744|Mylc2b|RLC-B	myosin, light chain 12B, regulatory	protein-coding
common_peak1-8976-9-12--0.510826311736872-0.394412252720706	chr11	58847134	58847786	+	0	NA	intron (NM_199152, intron 72 of 89)	intron (NM_199152, intron 72 of 89)	55865	NM_053168	94091	Mm.248049	NM_053168	ENSMUSG00000020455	Trim11	-	tripartite motif-containing 11	protein-coding
unique_peak2-39419-3-6--1.22133801201688-1.08602067057793	chr9	41479665	41480082	+	0	NA	Intergenic	RMER15|LTR|ERVL	89864	NR_029822	387236		NR_029822	miRBase:MI0000725	Mir125b-1	Mirn125b|Mirn125b-1	microRNA 125b-1	ncRNA
common_peak1-18035-20-34--0.641208232353773-0.863762398024911	chr7	143548601	143549303	+	0	NA	Intergenic	Intergenic	-7854	NR_040459	330664	Mm.127762	NR_040459		C230079O03Rik	C230079O03	RIKEN cDNA C230079O03 gene	ncRNA
common_peak1-9969-10-11--0.228547155712387-0.31137425193576	chr12	112952460	112952960	+	0	NA	intron (NM_001163388, intron 1 of 5)	intron (NM_001163388, intron 1 of 5)	1230	NM_026511	68020	Mm.425762	NM_026511	ENSMUSG00000037787	Apopt1	1700081D05Rik|2810002N01Rik|Apop-1|Apop1	apoptogenic, mitochondrial 1	protein-coding
common_peak2-30598-21-36--0.639964100362715-0.825714541185117	chr7	81571255	81572677	+	0	NA	intron (NM_001038643, intron 2 of 10)	L2a|LINE|L2	127700	NM_023908	108116	Mm.425467	NM_023908	ENSMUSG00000025790	Slco3a1	5830414C08Rik|Anr1|MJAM|OATP-D|R75096|Slc21a11	solute carrier organic anion transporter family, member 3a1	protein-coding
common_peak1-12122-12-5-1.06381348436648-1.78669045979184	chr17	26621642	26622157	+	0	NA	Intergenic	Intergenic	23518	NM_013642	19252	Mm.239041	NM_013642	ENSMUSG00000024190	Dusp1	3CH134|MKP1|Ptpn16|U19515|erp|mkp-1	dual specificity phosphatase 1	protein-coding
unique_peak1-1591-12-2-2.06381348436648-2.79529063155376	chr13	34207409	34208131	+	0	NA	Intergenic	Intergenic	-2629	NR_046184	432745	Mm.159104	NR_046184		4930447K03Rik	-	RIKEN cDNA 4930447K03 gene	ncRNA
common_peak1-16457-22-30--0.30691220529947-0.399869693390336	chr5	136051784	136052703	+	0	NA	Intergenic	Intergenic	-3330	NM_019577	56221	Mm.31505	NM_019577	ENSMUSG00000004814	Ccl24	CKb-6|MPIF-2|Scya24	chemokine (C-C motif) ligand 24	protein-coding
common_peak1-15341-35-20-1.03905283568374-2.16720861012098	chr4	52438261	52439473	+	0	NA	Intergenic	Lx3C|LINE|L1	12969	NR_045175	72648	Mm.391869	NR_045175	ENSMUSG00000085763	Smc2os	2700081L22Rik	structural maintenance of chromosomes 2, opposite strand	ncRNA
common_peak1-13931-16-39--1.2036644526193-2.22933157796381	chr2	85050492	85051377	+	0	NA	Intergenic	Intergenic	-14078	NM_001033346	241528	Mm.291095	NM_001033346	ENSMUSG00000075224	Lrrc55	A330097E02Rik|Gm351	leucine rich repeat containing 55	protein-coding
unique_peak2-35748-4-7--1.02346051385325-1.09384600808989	chr18	37954522	37954971	+	0	NA	intron (NM_033595, intron 1 of 3)	intron (NM_033595, intron 1 of 3)	-11318	NM_033581	93706	Mm.247203	NM_033581	ENSMUSG00000023036	Pcdhgc3	PC43|Pcdh2	protocadherin gamma subfamily C, 3	protein-coding
unique_peak1-4611-12-2-2.06381348436648-2.79529063155376	chr3	65975815	65976499	+	0	NA	intron (NM_145820, intron 6 of 13)	intron (NM_145820, intron 6 of 13)	-47652	NM_008987	19288	Mm.276776	NM_008987	ENSMUSG00000027832	Ptx3	AI607804|TSG-14	pentraxin related gene	protein-coding
common_peak1-15503-128-142-0.505134665299686-2.65543129823409	chr4	116074736	116077243	+	0	NA	intron (NM_008641, intron 3 of 28)	intron (NM_008641, intron 3 of 28)	60797	NM_001042743	17776	Mm.9287	NM_008641	ENSMUSG00000003810	Mast2	MAST205|Mtssk	microtubule associated serine/threonine kinase 2	protein-coding
common_peak2-22041-3-6--1.22133801201688-1.08602067057793	chr12	69364376	69364649	+	0	NA	Intergenic	Intergenic	-594254	NR_033146	100316870	Mm.379794	NR_033146		Gm17821	-	DDB1 and CUL4 associated factor 5 pseudogene	pseudo
common_peak2-26966-11-13--0.298661337805991-0.337263207250336	chr2	166905309	166905981	+	0	NA	Intergenic	Intergenic	14852	NR_028540	100217443		NR_028540		Snord12	MBII-99	small nucleolar RNA, C/D box 12	snoRNA
unique_peak2-32563-6-7--0.434601889619698-0.97990265578305	chr1	79671568	79672018	+	0	NA	Intergenic	MTD|LTR|MaLR	-3246	NM_183027	252903	Mm.32409	NM_183027	ENSMUSG00000054702	Ap1s3	1190009B22|Jr2|[s]3A	adaptor-related protein complex AP-1, sigma 3	protein-coding
common_peak2-27242-21-30--0.384707045120639-0.446094173747089	chr3	52195849	52196609	+	0	NA	Intergenic	Intergenic	123970	NM_019739	56458	Mm.29891	NM_019739	ENSMUSG00000044167	Foxo1	AI876417|Afxh|FKHR|Fkhr1|Foxo1a	forkhead box O1	protein-coding
common_peak2-27792-14-15--0.100783839642355-0.301029995663982	chr3	138061728	138062324	+	0	NA	Intergenic	Lx|LINE|L1	-16435	NM_011996	26876	Mm.158750	NM_011996	ENSMUSG00000037797	Adh4	Adh2	alcohol dehydrogenase 4 (class II), pi polypeptide	protein-coding
common_peak1-14589-38-46-0.0168638076208927-0.31027100108714	chr3	41741745	41742935	+	0	NA	Intergenic	Intergenic	195800	NM_027271	73852	Mm.29006	NM_027271	ENSMUSG00000025766	D3Ertd751e	2810009O15Rik|4930415G15Rik	DNA segment, Chr 3, ERATO Doi 751, expressed	protein-coding
unique_peak1-4283-9-1-2.18961340640422-2.31132995230379	chr2	140764235	140764723	+	0	NA	intron (NM_001013802, intron 4 of 18)	intron (NM_001013802, intron 4 of 18)	-267267	NM_178382	71436	Mm.426781	NM_178382	ENSMUSG00000051379	Flrt3	5530600M07Rik|C430047I10Rik|mKIAA1469	fibronectin leucine rich transmembrane protein 3	protein-coding
unique_peak2-36415-4-5--0.608423014574403-0.909929411522249	chr2	127715137	127715468	+	0	NA	intron (NM_028765, intron 8 of 17)	intron (NM_028765, intron 8 of 17)	34938	NM_028765	74121	Mm.244835	NM_028765	ENSMUSG00000027380	Acoxl	1200014P05Rik|AV025673	acyl-Coenzyme A oxidase-like	protein-coding
common_peak2-25692-27-28-0.133564955767664-0.358978896303361	chr19	16325200	16326167	+	0	NA	intron (NM_008139, intron 2 of 6)	intron (NM_008139, intron 2 of 6)	63811	NR_105832	102465218		NR_105832	miRBase:MI0021942	Mir496b	mmu-mir-496b	microRNA mir-496b	ncRNA
common_peak2-26993-125-183-0.100263423002538-0.413057608091309	chr2	168206101	168207724	+	0	NA	Intergenic	MTD|LTR|MaLR	-112081	NM_001081134	241794	Mm.425102	NM_001081134	ENSMUSG00000074575	Kcng1	AW536275|OTTMUSG00000016048	potassium voltage-gated channel, subfamily G, member 1	protein-coding
common_peak2-22999-9-9--0.132314688483142-1.03275496310833	chr14	60251634	60252149	+	0	NA	Intergenic	Intergenic	7773	NM_145463	219134	Mm.275409	NM_145463	ENSMUSG00000044461	Shisa2	9430059P22Rik|MAd2|Tmem46|mShisa|shisa	shisa homolog 2 (Xenopus laevis)	protein-coding
common_peak1-17344-57-91--0.257528915978084-0.554662476768468	chr6	149309098	149310352	+	0	NA	Intergenic	PB1D9|SINE|Alu	-47781	NM_001112796	12121	Mm.177181	NM_009753	ENSMUSG00000003452	Bicd1	B830009D06Rik	bicaudal D homolog 1 (Drosophila)	protein-coding
unique_peak2-39027-9-13--0.617741515653384-0.459837087125828	chr8	61396807	61397457	+	0	NA	Intergenic	Intergenic	6580	NM_173411	234290	Mm.39244	NM_173411	ENSMUSG00000049946	BC030500	-	cDNA sequence BC030500	protein-coding
unique_peak1-7215-10-6-0.549060422951165-1.21398586181642	chr9	70063197	70063860	+	0	NA	intron (NM_181072, intron 1 of 27)	intron (NM_181072, intron 1 of 27)	8371	NM_181072	71602	Mm.249311	NM_181072	ENSMUSG00000032220	Myo1e	2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3	myosin IE	protein-coding
unique_peak2-38932-5-25--2.40482005414695-3.46164246247458	chr8	23044008	23044921	+	0	NA	Intergenic	Lx7|LINE|L1	-1282	NM_139222	246082	Mm.390015	NM_139222	ENSMUSG00000048500	Defb15	BD-15	defensin beta 15	protein-coding
common_peak2-32274-9-8-0.0196884049619079-1.03275496310833	chrX	13243045	13243452	+	0	NA	exon (NM_175669, exon 4 of 4)	exon (NM_175669, exon 4 of 4)	4759	NM_175669	319200	Mm.383294	NM_175669	ENSMUSG00000047678	Gpr82	-	G protein-coupled receptor 82	protein-coding
common_peak1-12805-22-14-0.740393509478886-0.983972868822056	chr18	65802327	65803122	+	0	NA	intron (NM_207255, intron 3 of 5)	intron (NM_207255, intron 3 of 5)	-55198	NM_177028	319888	Mm.183576	NM_177028	ENSMUSG00000046610	Oacyl	5330437I02Rik|Acyl3	O-acyltransferase like	protein-coding
unique_peak2-35300-1-6--2.43441193227435-1.56314192529759	chr17	12724013	12724420	+	0	NA	Intergenic	Intergenic	-23646	NM_011395	20519	Mm.99252	NM_011395	ENSMUSG00000023828	Slc22a3	EMT|Oct3|Orct3|Slca22a3	solute carrier family 22 (organic cation transporter), member 3	protein-coding
common_peak1-13602-83-113-0.0813326109413852-0.360432268979005	chr2	18766503	18767908	+	0	NA	intron (NM_008845, intron 9 of 9)	intron (NM_008845, intron 9 of 9)	146556	NM_001001334	381350	Mm.330024	NM_001001334		BC061194	-	cDNA sequence BC061194	protein-coding
common_peak2-21579-9-9--0.132314688483142-1.03275496310833	chr11	97799645	97800189	+	0	NA	exon (NM_001163608, exon 9 of 14)	exon (NM_001163608, exon 9 of 14)	47843	NM_028199	72324	Mm.39617	NM_028199	ENSMUSG00000017417	Plxdc1	2410003I07Rik|AI848450|Tem7	plexin domain containing 1	protein-coding
common_peak2-27844-29-48--0.502419763500098-0.744998914848106	chr3	152165103	152166428	+	0	NA	intron (NM_001081277, intron 9 of 13)	intron (NM_001081277, intron 9 of 13)	106117	NM_001287139	108946	Mm.379292	NM_198416	ENSMUSG00000039068	Zzz3	3110065C23Rik|6430567E01Rik|AA408566|AI481057|AW556059|R75514	zinc finger, ZZ domain containing 3	protein-coding
common_peak1-15608-14-9-0.577288065470282-0.630231561310125	chr4	132353162	132353825	+	0	NA	Intergenic	B1F1|SINE|Alu	-1214	NM_001033308	230787	Mm.290912	NM_001033308	ENSMUSG00000037731	Themis2	ICB-1	thymocyte selection associated family member 2	protein-coding
common_peak2-26391-32-38--0.00631019964258872-0.303850168981672	chr2	52424123	52425079	+	0	NA	intron (NM_001037099, intron 2 of 13)	intron (NM_001037099, intron 2 of 13)	-10470	NM_001285427	12298	Mm.330223	NM_146123	ENSMUSG00000017412	Cacnb4	3110038O15Rik|Cchb4|lh	calcium channel, voltage-dependent, beta 4 subunit	protein-coding
common_peak1-19488-17-14-0.311405742596519-0.466170754204149	chrX	151095917	151096768	+	0	NA	Intergenic	A-rich|Low_complexity|Low_complexity	-82469	NM_001037167	434881	Mm.357614	NM_001037167	ENSMUSG00000072888	Samt2	EG434881|Gm5647	spermatogenesis associated multipass transmembrane protein 2	protein-coding
unique_peak2-35583-7-15--1.20090916970181-0.947446088118041	chr17	73036353	73037002	+	0	NA	Intergenic	Intergenic	-83030	NM_007439	11682	Mm.311854	NM_007439	ENSMUSG00000055471	Alk	CD246|Tcrz	anaplastic lymphoma kinase	protein-coding
common_peak1-13769-16-7-1.11826364226806-1.23399803405144	chr2	35581535	35582372	+	0	NA	intron (NM_001001602, intron 12 of 13)	ID_B1|SINE|B4	29701	NM_001290639	69601	Mm.29629	NM_001001602	ENSMUSG00000026883	Dab2ip	2310011D08Rik|AI480459|Aip1|mKIAA1743	disabled 2 interacting protein	protein-coding
common_peak1-17232-20-30--0.466121525795682-0.569352520859861	chr6	128101902	128102805	+	0	NA	Intergenic	L1MEf|LINE|L1	-8757	NM_175414	109246	Mm.21814	NM_175414	ENSMUSG00000030352	Tspan9	6720474K14Rik|9430079M16Rik|AU018597	tetraspanin 9	protein-coding
common_peak1-13472-9-13--0.617741515653384-0.459837087125828	chr2	127008735	127009206	+	0	NA	Intergenic	Intergenic	25046	NM_198630	329509	Mm.120738	NM_198630	ENSMUSG00000044145	1810024B03Rik	-	RIKEN cDNA 1810024B03 gene	protein-coding
unique_peak2-34175-4-6--0.830815435910851-0.989110657569874	chr13	33950917	33951266	+	0	NA	Intergenic	Intergenic	-15814	NM_001045535	435350	Mm.263418	NM_001045535	ENSMUSG00000069248	Serpinb6e	Gm11396|OTTMUSG00000000720|SPI3B|ovalbumin	serine (or cysteine) peptidase inhibitor, clade B, member 6e	protein-coding
common_peak2-19938-40-53--0.09591181941237-0.309382327481447	chr1	128244063	128245160	+	0	NA	intron (NM_172484, intron 3 of 14)	B4A|SINE|B4	144893	NM_172484	210356	Mm.377234	NM_172484	ENSMUSG00000049690	Nckap5	8430408F21|D130011D22Rik|E030049G20Rik|Erih1|Erih2|Gm1548|Nap5	NCK-associated protein 5	protein-coding
common_peak2-28109-12-17--0.521149016354673-0.417187467413082	chr4	88950949	88951402	+	0	NA	Intergenic	Intergenic	5766	NM_007670	12579	Mm.423094	NM_007670	ENSMUSG00000073802	Cdkn2b	AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b	cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)	protein-coding
common_peak2-23579-12-18--0.599151528355947-0.476916024233333	chr15	79892415	79893091	+	0	NA	Intergenic	Intergenic	16256	NR_028282	100302601		NR_028282		Snord83b	MBII-10	small nucleolar RNA, C/D box 83B	snoRNA
common_peak2-31219-53-72--0.0488515464640891-0.302548520215158	chr8	69583899	69585343	+	0	NA	Intergenic	Intergenic	200505	NM_001163564	234344	Mm.334561	NM_001163564	ENSMUSG00000014907	Naf1	Gm174	nuclear assembly factor 1 homolog (S. cerevisiae)	protein-coding
unique_peak2-38387-2-6--1.72480917832092-1.26211192963361	chr7	17541316	17541754	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-3609	NM_001007569	71691	Mm.275673	NM_001007569	ENSMUSG00000041141	Pnmal1	0710005I19Rik	PNMA-like 1	protein-coding
common_peak2-22864-16-14-0.211373046659543-0.364171515310935	chr14	27114677	27115319	+	0	NA	Intergenic	RLTR20D|LTR|ERVK	33254	NM_001177538	100039227	Mm.428840	NM_001177538	ENSMUSG00000072675	Duxbl2	ENSMUSG00000072675|Gm10394	doubl homeobox B-like 2	protein-coding
unique_peak2-35763-3-5--0.998945590680433-0.96108193396963	chr18	40283380	40283689	+	0	NA	Intergenic	Intergenic	95519	NM_023311	67180	Mm.270382	NM_023311	ENSMUSG00000024487	Yipf5	2610311I19Rik|AA408236|Yip1a	Yip1 domain family, member 5	protein-coding
common_peak2-31040-18-18-0.0649916377847664-0.323898164595606	chr8	14607239	14607960	+	0	NA	intron (NM_172910, intron 4 of 15)	intron (NM_172910, intron 4 of 15)	-280937	NM_012000	26889	Mm.254027	NM_012000	ENSMUSG00000026317	Cln8	mnd	ceroid-lipofuscinosis, neuronal 8	protein-coding
common_peak2-25470-6-7--0.434601889619698-0.97990265578305	chr19	4441483	4441879	+	0	NA	intron (NR_045989, intron 1 of 4)	intron (NR_045989, intron 1 of 4)	2122	NR_045989	319314	Mm.393810	NR_045989	ENSMUSG00000087132	A930001C03Rik	-	RIKEN cDNA A930001C03 gene	ncRNA
common_peak1-16260-54-69-0.0438027446847675-0.314891503798722	chr5	105876132	105877562	+	0	NA	intron (NM_001033550, intron 1 of 4)	L1Md_T|LINE|L1	32053	NM_001033550	433926	Mm.439781	NM_001033550	ENSMUSG00000070639	Lrrc8b	R75581|Ta-lrrp|mKIAA0231	leucine rich repeat containing 8 family, member B	protein-coding
common_peak2-24287-58-63-0.295949934890497-0.693339305075799	chr17	33684659	33685617	+	0	NA	intron (NM_172619, intron 17 of 24)	ORR1A3|LTR|MaLR	-7514	NM_053214	17916	Mm.42019	NM_053214	ENSMUSG00000024300	Myo1f	C330006B10Rik	myosin IF	protein-coding
unique_peak2-36260-1-10--3.08648862885404-2.57096726280955	chr2	58108019	58108272	+	0	NA	Intergenic	Intergenic	-21045	NR_040365	100502932	Mm.417207	NR_040365	ENSMUSG00000086995	Gm13544	OTTMUSG00000012672	predicted gene 13544	ncRNA
common_peak2-31520-20-8-1.31814978314888-1.77631109801764	chr8	109565971	109566402	+	0	NA	exon (NM_126165, exon 7 of 11)	exon (NM_126165, exon 7 of 11)	6328	NM_026513	68023	Mm.482335	NM_026513	ENSMUSG00000078931	Pdf	2610019N19Rik	peptide deformylase (mitochondrial)	protein-coding
unique_peak2-38322-5-6--0.511735258063458-0.947717972411649	chr6	146944735	146945129	+	0	NA	exon (NM_026221, exon 8 of 27)	exon (NM_026221, exon 8 of 27)	-36127	NM_025620	66532	Mm.45888	NM_025620	ENSMUSG00000040121	Rep15	2210417D09Rik	RAB15 effector protein	protein-coding
unique_peak2-37601-1-6--2.43441193227435-1.56314192529759	chr5	53955954	53956294	+	0	NA	intron (NM_001080928, intron 1 of 10)	intron (NM_001080928, intron 1 of 10)	9106	NM_001080928	19664	Mm.209292	NM_009035	ENSMUSG00000039191	Rbpj	AI843960|CBF1|Igkjrb|Igkrsbp|RBP-J|RBP-J kappa|RBPjk|Rbpsuh	recombination signal binding protein for immunoglobulin kappa J region	protein-coding
common_peak2-31733-2-10--2.37688587490062-2.09384600808989	chr9	14157270	14157815	+	0	NA	TTS (NM_028013)	TTS (NM_028013)	28144	NM_028013	71946	Mm.41423	NM_028013	ENSMUSG00000037419	Endod1	2210414F18Rik|2310067E08Rik|C85344	endonuclease domain containing 1	protein-coding
common_peak1-14699-13-15--0.221527969362231-0.308519316180257	chr3	69006709	69007491	+	0	NA	Intergenic	ORR1E|LTR|MaLR	-19241	NM_027843	71619	Mm.98122	NM_027843	ENSMUSG00000098207	Arl14	9130014L17Rik|Arf7	ADP-ribosylation factor-like 14	protein-coding
unique_peak1-5493-9-1-2.18961340640422-2.31132995230379	chr5	135523416	135523939	+	0	NA	intron (NM_016801, intron 8 of 9)	PB1D7|SINE|Alu	-16399	NM_025362	66114	Mm.178012	NM_025362	ENSMUSG00000061118	Dnajc30	1300007M11Rik|Wbscr18	DnaJ (Hsp40) homolog, subfamily C, member 30	protein-coding
unique_peak1-157-16-5-1.53330114154691-1.80287260729378	chr1	73027612	73028447	+	0	NA	Intergenic	LTR33|LTR|ERVL	34444	NM_009407	21958	Mm.425024	NM_009407	ENSMUSG00000026182	Tnp1	Stp-1|TP1|Tp-1	transition protein 1	protein-coding
unique_peak1-3292-9-1-2.18961340640422-2.31132995230379	chr18	75380418	75380935	+	0	NA	intron (NM_027727, intron 14 of 16)	L1_Mus2|LINE|L1	76295	NR_045394	100503117	Mm.250517	NR_045393		2010010A06Rik	5033420E22Rik	RIKEN cDNA 2010010A06 gene	ncRNA
unique_peak2-39899-1-7--2.62705701021674-1.80617997398389	chrX	93632227	93632583	+	0	NA	Intergenic	Intergenic	-18370	NM_001159628	15203	Mm.277092	NM_010417	ENSMUSG00000031209	Heph	C130006F04Rik|Cpl|mKIAA0698|sla	hephaestin	protein-coding
unique_peak2-34702-11-12--0.191746133889479-0.310474156842889	chr15	27997090	27997688	+	0	NA	Intergenic	Intergenic	-41786	NM_001081302	223435	Mm.485422	NM_001081302	ENSMUSG00000022263	Trio	6720464I07Rik|AA408740|Solo	triple functional domain (PTPRF interacting)	protein-coding
common_peak2-28334-32-41--0.113225403559101-0.311888488969622	chr4	134734170	134735228	+	0	NA	TTS (NM_019732)	TTS (NM_019732)	58139	NM_019732	12399	Mm.378894	NM_019732	ENSMUSG00000070691	Runx3	AML2|Cbfa3|Pebp2a3	runt related transcription factor 3	protein-coding
common_peak2-27471-23-19-0.399839409621718-0.538442145997695	chr3	90604594	90605341	+	0	NA	Intergenic	L1Md_F3|LINE|L1	74139	NM_207263	384997	Mm.316644	NM_207263	ENSMUSG00000042250	Pglyrp4	Gm1478|Gm413	peptidoglycan recognition protein 4	protein-coding
common_peak1-8105-15-24--0.631691439219068-0.650819692678081	chr1	182282217	182282952	+	0	NA	intron (NM_001081175, intron 2 of 7)	intron (NM_001081175, intron 2 of 7)	-21904	NR_003623	277333	Mm.389223	NM_199472		Gm5069	EG277333	glyceraldehyde-3-phosphate dehydrogenase pseudogene	pseudo
common_peak2-26089-31-47--0.359723829908033-0.560152715697887	chr2	157367391	157368483	+	0	NA	Intergenic	Intergenic	-17877	NM_001291129	18111	Mm.34330	NM_010923	ENSMUSG00000067786	Nnat	5730414I02Rik|AW107673|Peg5	neuronatin	protein-coding
unique_peak1-3989-6-4-0.24347001549294-0.989110657569874	chr2	34799687	34800170	+	0	NA	intron (NM_009421, intron 10 of 10)	intron (NM_009421, intron 10 of 10)	17364	NM_009421	22029	Mm.239514	NM_009421	ENSMUSG00000026875	Traf1	4732496E14Rik	TNF receptor-associated factor 1	protein-coding
unique_peak1-5824-25-10-1.40241828670781-2.39922209159552	chr6	72234190	72235365	+	0	NA	Intergenic	B1_Mur4|SINE|Alu	-19827	NM_001282071	20388	Mm.46033	NM_147779	ENSMUSG00000056370	Sftpb	AI562151|SF-B|SP-B|Sftp-3|Sftp3	surfactant associated protein B	protein-coding
unique_peak1-4516-26-6-2.12054417010086-4.0937649558367	chr3	27228342	27229186	+	0	NA	intron (NM_009425, intron 3 of 4)	intron (NM_009425, intron 3 of 4)	12765	NM_009425	22035	Mm.1062	NM_009425	ENSMUSG00000039304	Tnfsf10	A330042I21Rik|AI448571|APO-2L|Ly81|TL2|Trail	tumor necrosis factor (ligand) superfamily, member 10	protein-coding
common_peak2-25415-15-18--0.235762762887929-0.326591483156968	chr19	53460551	53461211	+	0	NA	intron (NM_172429, intron 2 of 5)	intron (NM_172429, intron 2 of 5)	4182	NM_172429	76479	Mm.313687	NM_172429	ENSMUSG00000025024	Smndc1	2410004J23Rik|4933440I19Rik	survival motor neuron domain containing 1	protein-coding
common_peak1-12911-39-16-1.52829840566881-4.11413917592912	chr18	84848470	84850180	+	0	NA	intron (NM_023149, intron 3 of 11)	B2_Mm1a|SINE|B2	2126	NM_001289531	66054	Mm.29646	NM_023149	ENSMUSG00000024644	Cndp2	0610010E05Rik|C76600|Cn2|Dip-2|Pep-1|Pep1	CNDP dipeptidase 2 (metallopeptidase M20 family)	protein-coding
unique_peak2-39286-8-8--0.164702583494742-1.00793137938329	chr8	122546511	122547087	+	0	NA	intron (NM_030209, intron 6 of 14)	B1F|SINE|Alu	30429	NM_030209	78892	Mm.264680	NM_030209	ENSMUSG00000031825	Crispld2	1810049K24Rik|Lcrisp2|Lgl1|coffeecrisp	cysteine-rich secretory protein LCCL domain containing 2	protein-coding
unique_peak1-4472-22-6-1.8399291830298-3.01815507148775	chr2	180963152	180964098	+	0	NA	intron (NM_183162, intron 18 of 18)	intron (NM_183162, intron 18 of 18)	8904	NM_199312	332713	Mm.23349	NM_199312	ENSMUSG00000047841	BC051628	1700026M20Rik	cDNA sequence BC051628	protein-coding
common_peak1-7987-13-10-0.319040412000471-0.446472590016315	chr1	161130644	161131448	+	0	NA	Intergenic	L1M4b|LINE|L1	-31411	NM_011931	26374	Mm.328135	NM_011931	ENSMUSG00000040782	Rfwd2	AI316802|C80879|Cop1	ring finger and WD repeat domain 2	protein-coding
unique_peak2-32817-3-6--1.22133801201688-1.08602067057793	chr1	185282670	185283002	+	0	NA	Intergenic	Intergenic	397917	NM_016928	53791	Mm.116894	NM_016928	ENSMUSG00000079164	Tlr5	-	toll-like receptor 5	protein-coding
common_peak2-28677-12-11-0.0638134843664826-0.337263207250336	chr5	32191625	32192178	+	0	NA	intron (NM_181281, intron 5 of 10)	intron (NM_181281, intron 5 of 10)	191478	NM_181282	107976	Mm.482126	NM_144541	ENSMUSG00000052139	Bre	6030405P19Rik|AI429776|B830038C02Rik	brain and reproductive organ-expressed protein	protein-coding
common_peak2-20145-37-45-0.0024311154288057-0.303416277109641	chr1	167349660	167350581	+	0	NA	intron (NM_028759, intron 5 of 18)	intron (NM_028759, intron 5 of 18)	40474	NM_028759	74106	Mm.227605	NM_028759	ENSMUSG00000026571	Dcaf6	1200006M05Rik|Iqwd1|PC326	DDB1 and CUL4 associated factor 6	protein-coding
common_peak2-27379-34-11-1.79710602628011-4.50078841046546	chr3	87116439	87117095	+	0	NA	Intergenic	Intergenic	-45036	NM_009690	11801	Mm.6676	NM_009690	ENSMUSG00000015854	Cd5l	1/6|AAC-11|AI047839|Api6|CT2|Pdp|Sp-alpha	CD5 antigen-like	protein-coding
common_peak1-16927-36-26-0.724433584004286-1.41868709588403	chr6	83026710	83028173	+	0	NA	promoter-TSS (NM_197992)	promoter-TSS (NM_197992)	-943	NM_197992	69837	Mm.12261	NM_197992	ENSMUSG00000069678	Pcgf1	2010002K04Rik|AU024121|Nspc1	polycomb group ring finger 1	protein-coding
common_peak1-16905-11-14--0.398197011356905-0.379391706698377	chr6	72379881	72380601	+	0	NA	3' UTR (NM_019802, exon 15 of 15)	3' UTR (NM_019802, exon 15 of 15)	-8436	NR_046011	78108	Mm.440743	NR_046011		4930414L22Rik	AI449819	RIKEN cDNA 4930414L22 gene	ncRNA
unique_peak1-3758-20-1-3.48807478459119-5.43827864561946	chr19	54752845	54753659	+	0	NA	Intergenic	RMER17B|LTR|ERVK	420685	NM_008149	14732	Mm.210196	NM_008149	ENSMUSG00000024978	Gpam	GPAT|GPAT1	glycerol-3-phosphate acyltransferase, mitochondrial	protein-coding
common_peak2-29611-11-7-0.508693584251613-1.21681515183528	chr6	54069417	54069843	+	0	NA	intron (NM_001163640, intron 1 of 12)	intron (NM_001163640, intron 1 of 12)	79704	NM_001163640	69993	Mm.321147	NM_023543	ENSMUSG00000004633	Chn2	1700026N20Rik|4930557O16Rik|ARHGAP3|Bch	chimerin 2	protein-coding
common_peak1-17791-21-10-1.11005764662894-1.59083646988122	chr7	98655780	98656689	+	0	NA	intron (NM_011807, intron 2 of 22)	intron (NM_011807, intron 2 of 22)	416938	NM_011807	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
common_peak2-29836-16-22--0.405298313788951-0.440610794044987	chr6	94648120	94648974	+	0	NA	intron (NM_008377, intron 1 of 18)	intron (NM_008377, intron 1 of 18)	1592	NM_008377	16206	Mm.245210	NM_008377	ENSMUSG00000030029	Lrig1	D6Bwg0781e|Img|LIG-1	leucine-rich repeats and immunoglobulin-like domains 1	protein-coding
unique_peak2-33804-7-10--0.660340788339108-1.12966497611638	chr11	120617375	120617849	+	0	NA	Intergenic	MuRRS-int|LTR|ERV1	-24277	NM_007621	12409	Mm.21454	NM_007621	ENSMUSG00000025150	Cbr2	MLCR	carbonyl reductase 2	protein-coding
common_peak1-10978-21-28--0.288491729861336-0.367910579842127	chr15	31224307	31225212	+	0	NA	3' UTR (NM_001164441, exon 4 of 4)	3' UTR (NM_001164441, exon 4 of 4)	70619	NM_146057	223453	Mm.222867	NM_146057	ENSMUSG00000039168	Dap	4921531N22Rik|AI789753|AU040360	death-associated protein	protein-coding
common_peak2-23465-26-8-1.75797409071615-3.2467506969819	chr15	72928799	72929334	+	0	NA	Intergenic	Intergenic	8224	NM_053068	93696	Mm.23095	NM_053068	ENSMUSG00000068391	Chrac1	2410152E03Rik|2810406L04Rik|YCL1	chromatin accessibility complex 1	protein-coding
common_peak1-13295-9-13--0.617741515653384-0.459837087125828	chr19	38709972	38710379	+	0	NA	intron (NM_019588, intron 2 of 31)	intron (NM_019588, intron 2 of 31)	111488	NM_019588	74055	Mm.34031	NM_019588	ENSMUSG00000024998	Plce1	4933403A21Rik|PLCepsilon|Plce|mKIAA1516	phospholipase C, epsilon 1	protein-coding
common_peak2-25619-15-6-1.20480982849805-1.32521814697968	chr19	9028386	9028767	+	0	NA	intron (NM_197993, intron 1 of 8)	intron (NM_197993, intron 1 of 8)	236	NM_197993	70044	Mm.165979	NM_197993	ENSMUSG00000071645	Tut1	2700038E08Rik|PAPD2|Rbm21|TUTase6	terminal uridylyl transferase 1, U6 snRNA-specific	protein-coding
common_peak1-18170-26-52--0.800021362404737-1.59856525524509	chr8	13757400	13758352	+	0	NA	intron (NM_027276, intron 1 of 17)	CpG	186	NM_027276	69957	Mm.182412	NM_027276	ENSMUSG00000038416	Cdc16	2700071J12Rik|2810431D22Rik|APC6	CDC16 cell division cycle 16	protein-coding
unique_peak2-33457-5-13--1.51173525806346-1.78669045979184	chr11	66421012	66421355	+	0	NA	Intergenic	Intergenic	-81555	NM_001034874	380702	Mm.351764	NM_001034874	ENSMUSG00000053930	Shisa6	Gm879	shisa homolog 6 (Xenopus laevis)	protein-coding
common_peak2-21097-6-10--0.894033508256995-1.21398586181642	chr11	51763762	51764071	+	0	NA	Intergenic	Intergenic	-17217	NM_029976	52626	Mm.289456	NM_029976	ENSMUSG00000020392	Cdkn2aipnl	A430101B06Rik|AA409260|D11Ertd497e|MNCb-1520	CDKN2A interacting protein N-terminal like	protein-coding
common_peak2-21591-17-31--0.781703661794962-0.932560489028298	chr11	98682567	98683320	+	0	NA	intron (NM_138660, intron 4 of 13)	intron (NM_138660, intron 4 of 13)	-11540	NR_033551	100037262	Mm.442062	NR_033551	ENSMUSG00000075576	Gm12359	OTTMUSG00000006457	predicted gene 12359	ncRNA
unique_peak1-1669-7-1-1.79909083029819-1.80617997398389	chr13	67500420	67500803	+	0	NA	promoter-TSS (NM_001080941)	promoter-TSS (NM_001080941)	92	NM_001080941	72807	Mm.303790	NM_001080941	ENSMUSG00000078994	Zfp429	2810487A22Rik|AI929863|Rsl2	zinc finger protein 429	protein-coding
unique_peak2-36326-1-9--2.94898510510411-2.31132995230379	chr2	85060412	85060843	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-23771	NM_001033346	241528	Mm.291095	NM_001033346	ENSMUSG00000075224	Lrrc55	A330097E02Rik|Gm351	leucine rich repeat containing 55	protein-coding
unique_peak2-35681-7-17--1.37083417114412-1.23399803405144	chr18	15063363	15064288	+	0	NA	Intergenic	Intergenic	-83679	NR_045372	74456	Mm.391075	NR_045372		4933424G05Rik	-	RIKEN cDNA 4933424G05 gene	ncRNA
common_peak2-22851-4-7--1.02346051385325-1.09384600808989	chr14	25473510	25473895	+	0	NA	Intergenic	Intergenic	163799	NM_011297	20088	Mm.16775	NM_011297	ENSMUSG00000025290	Rps24	-	ribosomal protein S24	protein-coding
unique_peak1-3410-15-4-1.69023665566829-1.97518968347063	chr19	5745442	5746162	+	0	NA	intron (NM_008520, intron 3 of 27)	CpG	4898	NM_008520	16998	Mm.182396	NM_008520	ENSMUSG00000024940	Ltbp3	Ltbp2|mFLJ00070	latent transforming growth factor beta binding protein 3	protein-coding
unique_peak1-6525-9-5-0.604650905683064-1.21398586181642	chr7	120981876	120982349	+	0	NA	intron (NM_145584, intron 3 of 15)	intron (NM_145584, intron 3 of 15)	72600	NM_145584	233744	Mm.334160	NM_145584	ENSMUSG00000038156	Spon1	AI666765|AW455831|BC020531|D330035F22Rik|FSP	spondin 1, (f-spondin) extracellular matrix protein	protein-coding
unique_peak1-4779-21-3-2.56948926526624-4.33845181153635	chr3	127913827	127914704	+	0	NA	intron (NR_045704, intron 2 of 5)	intron (NR_045704, intron 2 of 5)	20258	NR_045704	402774	Mm.209170	NR_045704		D030025E07Rik	-	RIKEN cDNA D030025E07 gene	ncRNA
common_peak1-8810-19-13-0.595332404604082-0.713635438203849	chr11	20937027	20937796	+	0	NA	Intergenic	Intergenic	-53916	NM_023324	67245	Mm.28957	NM_023324	ENSMUSG00000020134	Peli1	2810468L03Rik|A930031K15Rik|AA409794|AI586297|D11Ertd676e	pellino 1	protein-coding
unique_peak1-1743-18-4-1.99099105634099-2.82951996911245	chr13	102572940	102573869	+	0	NA	Intergenic	L1MC3|LINE|L1	-35232	NM_001077495	18708	Mm.259333	NM_001024955	ENSMUSG00000041417	Pik3r1	PI3K|p50alpha|p55alpha|p85alpha	phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)	protein-coding
unique_peak2-37370-2-6--1.72480917832092-1.26211192963361	chr4	137475543	137475965	+	0	NA	intron (NM_199307, intron 3 of 19)	intron (NM_199307, intron 3 of 19)	57602	NM_199307	230857	Mm.401062	NM_199307	ENSMUSG00000057530	Ece1	AW322500|ECE-1|ECE-1a|ECE-1b|ECE-1d	endothelin converting enzyme 1	protein-coding
common_peak1-18793-33-17-1.16141256108322-2.37490429172804	chr9	41581483	41582801	+	0	NA	Intergenic	RLTR11A2|LTR|ERVK	192133	NR_029822	387236		NR_029822	miRBase:MI0000725	Mir125b-1	Mirn125b|Mirn125b-1	microRNA 125b-1	ncRNA
unique_peak1-3540-9-0-3.18961340640422-3.01029995663981	chr19	23143497	23144020	+	0	NA	Intergenic	MER21B|LTR|ERV1	-71958	NM_010638	16601	Mm.291595	NM_010638	ENSMUSG00000033863	Klf9	2310051E17Rik|AA589643|BTEB-1|Bteb1|ENSMUSG00000055440|Gm9971	Kruppel-like factor 9	protein-coding
common_peak1-15550-10-13--0.450939577048835-0.386243247519795	chr4	123411566	123412165	+	0	NA	TTS (NM_023423)	TTS (NM_023423)	15677	NM_023423	68050	Mm.27903	NM_023423		Akirin1	6330407G11Rik	akirin 1	protein-coding
common_peak2-26769-13-21--0.680959587999529-0.607095980551316	chr2	143063009	143063762	+	0	NA	Intergenic	RLTR23|LTR|ERV1	159157	NM_020595	57329	Mm.157751	NM_020595	ENSMUSG00000027416	Otor	CDRAP|Fdp|MIA|MIAL	otoraplin	protein-coding
common_peak2-27169-56-115--0.622385169688329-2.14339138582574	chr3	32397101	32398159	+	0	NA	Intergenic	ORR1C1|LTR|MaLR	-6739	NM_001195074	100502876	Mm.383358	NM_001195074	ENSMUSG00000091091	Kcnmb3	EG435726|Gm5707	potassium large conductance calcium-activated channel, subfamily M, beta member 3	protein-coding
common_peak1-12082-12-13--0.158578936969966-0.301029995663979	chr17	24567081	24567675	+	0	NA	intron (NM_010023, intron 2 of 6)	B4A|SINE|B4	3750	NM_010023	13177	Mm.291743	NM_010023	ENSMUSG00000024132	Eci1	Dci|eci	enoyl-Coenzyme A delta isomerase 1	protein-coding
unique_peak2-35865-5-10--1.16381195464315-1.33892459842472	chr18	77767312	77767773	+	0	NA	intron (NM_001164504, intron 1 of 7)	RMER6A|LTR|ERVK	36333	NM_001164504	225743	Mm.23293	NM_001164504	ENSMUSG00000025427	Rnf165	2900024M11Rik|AI427432|Ark2c|G630064H08Rik|Gm96	ring finger protein 165	protein-coding
common_peak1-15103-10-10--0.103016273628528-0.301029995663987	chr3	132983429	132983949	+	0	NA	intron (NM_146141, intron 1 of 11)	intron (NM_146141, intron 1 of 11)	10615	NM_146141	74776	Mm.210305	NM_146141	ENSMUSG00000028013	Ppa2	1110013G13Rik|Sid6306	pyrophosphatase (inorganic) 2	protein-coding
common_peak1-8143-27-49--0.652310238879489-1.08158034290998	chr1	191182400	191183376	+	0	NA	intron (NM_001281848, intron 1 of 5)	intron (NM_001281848, intron 1 of 5)	-14817	NM_001281847	16526	Mm.33304	NM_010607	ENSMUSG00000037624	Kcnk2	A430027H14Rik|AI848635|TREK-1	potassium channel, subfamily K, member 2	protein-coding
common_peak1-10933-33-12-1.63089784438444-3.75499050687144	chr15	10759014	10760214	+	0	NA	intron (NR_040357, intron 1 of 2)	MTEb-int|LTR|MaLR	808	NR_040357	100502601	Mm.399434	NR_040357		Gm19276	-	predicted gene, 19276	ncRNA
unique_peak2-32692-11-19--0.813234510635749-0.769930178837768	chr1	143770193	143771161	+	0	NA	Intergenic	Intergenic	-1217698	NR_040604	75910	Mm.483845	NR_040604		4930590L20Rik	-	RIKEN cDNA 4930590L20 gene	ncRNA
common_peak1-12767-9-9--0.132314688483142-1.03275496310833	chr18	60761495	60762001	+	0	NA	exon (NM_001109975, exon 2 of 2)	exon (NM_001109975, exon 2 of 2)	8010	NM_001109975	104027	Mm.252321	NM_177340	ENSMUSG00000043079	Synpo	9030217H17Rik|9130229N11|9330140I15Rik|AW046661	synaptopodin	protein-coding
common_peak2-27988-10-6-0.549060422951165-1.21398586181642	chr4	44012264	44012652	+	0	NA	Intergenic	Lx7|LINE|L1	-13057	NM_016760	12757	Mm.298875	NM_016760	ENSMUSG00000028478	Clta	AV026556|Lca	clathrin, light polypeptide (Lca)	protein-coding
common_peak1-17455-10-8-0.186490343566457-1.078512453669	chr7	19131067	19131565	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-13740	NM_054060	114868	Mm.389809	NM_054060	ENSMUSG00000070798	Psg25	cea13	pregnancy-specific glycoprotein 25	protein-coding
common_peak1-16248-21-52--1.15843118929696-2.59472032287453	chr5	104459322	104460176	+	0	NA	Intergenic	Intergenic	-8934	NM_053262	114664	Mm.46019	NM_053262	ENSMUSG00000029311	Hsd17b11	Dhrs8|Pan1b|SDR2|retSDR2	hydroxysteroid (17-beta) dehydrogenase 11	protein-coding
unique_peak1-6971-8-1-2.00522241794757-2.05605744720049	chr8	118808694	118809214	+	0	NA	Intergenic	Intergenic	-219961	NM_029297	75465	Mm.23114	NM_029297	ENSMUSG00000034467	Dynlrb2	1700009A04Rik|DNLC2B|Dncl2b	dynein light chain roadblock-type 2	protein-coding
common_peak2-29195-25-41--0.530467517433655-0.749946955723563	chr5	136049143	136050583	+	0	NA	promoter-TSS (NM_019577)	promoter-TSS (NM_019577)	-950	NM_019577	56221	Mm.31505	NM_019577	ENSMUSG00000004814	Ccl24	CKb-6|MPIF-2|Scya24	chemokine (C-C motif) ligand 24	protein-coding
unique_peak2-37526-10-6-0.549060422951165-1.21398586181642	chr5	24039006	24039412	+	0	NA	3' UTR (NM_080444, exon 6 of 6)	3' UTR (NM_080444, exon 6 of 6)	-6543	NM_015739	231044	Mm.246596	NM_015739		Gbx1	Gbx-1	gastrulation brain homeobox 1	protein-coding
unique_peak2-33310-4-4--0.345388608740609-0.864171920961574	chr11	5739959	5740375	+	0	NA	Intergenic	Intergenic	-2148	NM_017401	54125	Mm.260194	NM_017401	ENSMUSG00000020474	Polm	AI462166|B230309I03Rik|Tdt-N	polymerase (DNA directed), mu	protein-coding
common_peak2-21093-32-43--0.180339599417637-0.343417008601348	chr11	51635480	51636658	+	0	NA	intron (NM_199299, intron 9 of 11)	intron (NM_199299, intron 9 of 11)	34914	NM_199299	76901	Mm.259996	NM_199299	ENSMUSG00000020387	Jade2	1200017K05Rik|AI480685|Phf15|mKIAA0239	jade family PHD finger 2	protein-coding
common_peak2-19751-33-61--0.622858747861346-1.25612039445446	chr1	75235831	75237365	+	0	NA	intron (NM_020266, intron 4 of 8)	MIR|SINE|MIR	3321	NM_001159885	56812	Mm.489660	NM_020266		Dnajb2	2700059H22Rik|Dnajb10|Hsj1|mDj8	DnaJ (Hsp40) homolog, subfamily B, member 2	protein-coding
unique_peak1-1226-20-2-2.90311228387004-4.53603905993749	chr11	110167634	110168390	+	0	NA	intron (NM_147219, intron 11 of 38)	intron (NM_147219, intron 11 of 38)	31018	NM_147219	217265	Mm.41942	NM_147219	ENSMUSG00000018800	Abca5	ABC13|B930033A02Rik|mKIAA1888	ATP-binding cassette, sub-family A (ABC1), member 5	protein-coding
common_peak1-17415-19-24--0.241168863113038-0.344491671143527	chr7	6154903	6155686	+	0	NA	intron (NM_178028, intron 2 of 5)	PB1D9|SINE|Alu	6602	NM_178028	232836	Mm.246599	NM_178028	ENSMUSG00000034660	Galp	-	galanin-like peptide	protein-coding
common_peak1-12054-17-22--0.305265617851975-0.348739088570342	chr17	22739379	22740060	+	0	NA	intron (NM_001104575, intron 2 of 5)	intron (NM_001104575, intron 2 of 5)	1604	NM_001104575	628185	Mm.390947	NM_001104575	ENSMUSG00000094921	Vmn2r112	EG628185|V2rp1	vomeronasal 2, receptor 112	protein-coding
unique_peak2-39871-10-25--1.34402437313232-1.74319850844462	chrX	74084952	74085743	+	0	NA	Intergenic	L1Md_T|LINE|L1	-237084	NM_001201395	74987	Mm.107996	NM_001201395	ENSMUSG00000079525	4930468A15Rik	-	RIKEN cDNA 4930468A15 gene	protein-coding
common_peak1-12782-15-6-1.20480982849805-1.32521814697968	chr18	62031952	62032764	+	0	NA	intron (NM_001164491, intron 2 of 23)	RCHARR1|DNA|MER1_type	39120	NM_198649	319713	Mm.329478	NM_198649	ENSMUSG00000032735	Ablim3	AW990719|D930036B08Rik	actin binding LIM protein family, member 3	protein-coding
common_peak2-25242-35-51--0.269069459678588-0.449053920623485	chr18	64642938	64643990	+	0	NA	intron (NM_007998, intron 1 of 10)	intron (NM_007998, intron 1 of 10)	5256	NM_007998	14151	Mm.1070	NM_007998	ENSMUSG00000024588	Fech	AI894116|Fcl|fch	ferrochelatase	protein-coding
unique_peak2-37079-6-9--0.75652998450706-1.11707584880836	chr3	148959630	148960193	+	0	NA	Intergenic	Intergenic	22210	NR_040591	381482	Mm.393866	NR_040591		Gm1653	-	predicted gene 1653	ncRNA
unique_peak2-35371-10-12--0.344024373132323-0.340565874754526	chr17	28256725	28257353	+	0	NA	Intergenic	B3|SINE|B2	-22432	NM_001004366	268935	Mm.258491	NM_001004366	ENSMUSG00000038677	Scube3	CEGF3|D030038I21Rik	signal peptide, CUB domain, EGF-like 3	protein-coding
common_peak2-27984-28-28-0.194978124693891-0.390124689062469	chr4	43668983	43669811	+	0	NA	promoter-TSS (NM_026871)	promoter-TSS (NM_026871)	-80	NM_026871	68917	Mm.25285	NM_026871	ENSMUSG00000028470	Hint2	1190005L05Rik	histidine triad nucleotide binding protein 2	protein-coding
common_peak2-29520-14-26--0.855671341805824-0.949797625454538	chr6	34877100	34878224	+	0	NA	intron (NM_009292, intron 1 of 8)	intron (NM_009292, intron 1 of 8)	6702	NM_009292	20899	Mm.5171	NM_009292	ENSMUSG00000029848	Stra8	-	stimulated by retinoic acid gene 8	protein-coding
common_peak1-12376-84-192--0.657522978379055-3.71827439256535	chr17	65782272	65784148	+	0	NA	intron (NM_001289485, intron 11 of 15)	RLTR20B3|LTR|ERVK	106912	NM_001008973	381107	Mm.141275	NM_001008973	ENSMUSG00000045036	Tmem232	E130009J12Rik|Gm940|Tes13-L|Tes13-S	transmembrane protein 232	protein-coding
unique_peak2-35478-5-7--0.704380336005853-1.01466476204226	chr17	44708625	44709161	+	0	NA	intron (NR_073425, intron 5 of 5)	intron (NR_073425, intron 5 of 5)	164232	NR_073425	12393	Mm.391013	NM_009820	ENSMUSG00000039153	Runx2	AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a	runt related transcription factor 2	protein-coding
unique_peak2-34232-7-9--0.522837264589173-1.05908390183068	chr13	51852716	51853166	+	0	NA	intron (NM_001281880, intron 2 of 16)	intron (NM_001281880, intron 2 of 16)	36175	NM_001281880	20354	Mm.33903	NM_013660	ENSMUSG00000021451	Sema4d	CD100|Semacl2|Semaj|Semcl2|coll-4	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D	protein-coding
common_peak1-12901-6-6--0.241956811677302-0.947717972411649	chr18	82750866	82751160	+	0	NA	intron (NM_001025258, intron 4 of 4)	intron (NM_001025258, intron 4 of 4)	27113	NM_001025254	17196	Mm.252063	NM_010777	ENSMUSG00000041607	Mbp	C76307|Hmbpr|R75289|golli-mbp|mld|shi	myelin basic protein	protein-coding
common_peak2-22448-29-41--0.28002734216365-0.403996330555226	chr13	41605877	41606674	+	0	NA	Intergenic	Intergenic	-23546	NM_001111324	18003	Mm.288980	NM_017464	ENSMUSG00000021365	Nedd9	Cas-L|CasL|HEF1|MEF1|Nedd-9|p105	neural precursor cell expressed, developmentally down-regulated gene 9	protein-coding
common_peak1-17880-50-30-1.08674400609208-3.3054085949608	chr7	118115235	118116371	+	0	NA	intron (NM_194464, intron 1 of 20)	B4|SINE|B4	10172	NM_194464	17540	Mm.250023	NM_010826	ENSMUSG00000005611	Mrvi1	BB115629|Irag|Ris1	MRV integration site 1	protein-coding
common_peak1-14786-17-43--1.24113528043226-2.37206698596504	chr3	89419238	89419971	+	0	NA	intron (NM_080466, intron 3 of 7)	intron (NM_080466, intron 3 of 7)	95518	NM_080466	140493	Mm.120250	NM_080466		Kcnn3	KCa2.3|SK3|SKCA3	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	protein-coding
common_peak1-18372-27-12-1.29110623275414-2.3494062982954	chr8	70543189	70544367	+	0	NA	Intergenic	Intergenic	-45305	NM_177698	234353	Mm.32525	NM_027626	ENSMUSG00000030465	Psd3	4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D	pleckstrin and Sec7 domain containing 3	protein-coding
common_peak1-11854-11-14--0.398197011356905-0.379391706698377	chr16	91485276	91485868	+	0	NA	5' UTR (NM_010508, exon 1 of 11)	5' UTR (NM_010508, exon 1 of 11)	112	NM_010508	15975	Mm.502	NM_010508		Ifnar1	CD118|Ifar|Ifnar|Ifrc|Infar	interferon (alpha and beta) receptor 1	protein-coding
common_peak1-11000-70-36-1.41051355074645-6.7740518792401	chr15	36820165	36822379	+	0	NA	Intergenic	(TTCA)n|Simple_repeat|Simple_repeat	-94588	NM_001253806	22631	Mm.3360	NM_011740	ENSMUSG00000022285	Ywhaz	1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	protein-coding
unique_peak1-2513-35-2-3.84640775774135-10.2940202619029	chr16	17797180	17798523	+	0	NA	intron (NM_153790, intron 1 of 10)	CpG	476	NM_153790	224024	Mm.194950	NM_153790	ENSMUSG00000012017	Scarf2	AI194363|NSR1|SREC-II|SRECRP-1|Scarf1|Scatf1|Srec2|SrecII|W53987|W65560	scavenger receptor class F, member 2	protein-coding
unique_peak1-5335-8-2-1.42025991722641-1.65811743852845	chr5	89748720	89749240	+	0	NA	Intergenic	L1_Mur3|LINE|L1	137943	NM_008096	14473	Mm.196595	NM_008096	ENSMUSG00000035540	Gc	DBP|VDB	group specific component	protein-coding
common_peak2-23636-19-32--0.641706792696767-0.800403172662453	chr15	83463981	83464604	+	0	NA	intron (NM_022723, intron 8 of 21)	intron (NM_022723, intron 8 of 21)	-38705	NM_183017	223723	Mm.46778	NM_183017	ENSMUSG00000016757	Ttll12	BC055368|D430005B17	tubulin tyrosine ligase-like family, member 12	protein-coding
unique_peak2-39510-1-9--2.94898510510411-2.31132995230379	chr9	63758327	63758740	+	0	NA	Intergenic	Intergenic	111333	NM_008542	17130	Mm.325757	NM_008542	ENSMUSG00000036867	Smad6	Madh6|b2b390Clo	SMAD family member 6	protein-coding
unique_peak1-7360-12-2-2.06381348436648-2.79529063155376	chrX	33505379	33505906	+	0	NA	intron (NM_001009947, intron 10 of 52)	RSINE1|SINE|B4	76815	NM_001009947	75974	Mm.32873	NM_177745	ENSMUSG00000031093	Dock11	5033414A21Rik|8030476J24|Zizimin2|sph238	dedicator of cytokinesis 11	protein-coding
unique_peak2-37688-3-7--1.41398308995928-1.23214870625617	chr5	99240544	99240975	+	0	NA	Intergenic	Intergenic	-42699	NM_173404	110075	Mm.209571	NM_173404	ENSMUSG00000029335	Bmp3	9130206H07|9530029I04Rik	bone morphogenetic protein 3	protein-coding
common_peak2-24705-15-25--0.688274967585436-0.73354163167379	chr17	46029102	46029981	+	0	NA	Intergenic	MTD|LTR|MaLR	132571	NM_001110267	22339	Mm.282184	NM_009505	ENSMUSG00000023951	Vegfa	Vegf|Vpf	vascular endothelial growth factor A	protein-coding
common_peak2-21445-15-17--0.157760250886656-0.307611222530528	chr11	86623723	86624301	+	0	NA	Intergenic	Intergenic	-2850	NM_026191	67487	Mm.260627	NM_026191	ENSMUSG00000018425	Dhx40	2410016C14Rik|ARG147|DDX40|PAD	DEAH (Asp-Glu-Ala-His) box polypeptide 40	protein-coding
common_peak1-13401-13-12-0.0780323124966764-0.334470287753051	chr19	47536492	47537251	+	0	NA	intron (NM_001164717, intron 1 of 13)	intron (NM_001164717, intron 1 of 13)	2030	NM_001164717	14218	Mm.127560	NM_008018	ENSMUSG00000053617	Sh3pxd2a	2310014D11Rik|AA589508|AI256723|AI413738|C230050L11|EG329070|Fish|Gm5098|Sh3md1|TSK5|Tks5	SH3 and PX domains 2A	protein-coding
common_peak1-8954-8-16--1.08224042330277-0.891319708951328	chr11	54936171	54936689	+	0	NA	Intergenic	ORR1B2-int|LTR|MaLR	24943	NM_010299	14667	Mm.287807	NM_010299	ENSMUSG00000000594	Gm2a	AA408702|AW215435|GM2-AP|SAP-3	GM2 ganglioside activator protein	protein-coding
unique_peak2-35982-2-7--1.91745425626332-1.45399745587252	chr19	24861840	24862276	+	0	NA	intron (NM_175013, intron 6 of 10)	MTC|LTR|MaLR	74274	NM_175013	226041	Mm.105222	NM_175013		Pgm5	4833423B07|9530034F03Rik|D830025G17|aciculin	phosphoglucomutase 5	protein-coding
common_peak1-15450-45-53-0.105470523181403-0.349953584539098	chr4	97777912	97779255	+	0	NA	3' UTR (NM_001122953, exon 10 of 10)	3' UTR (NM_001122953, exon 10 of 10)	271373	NM_053157	94043	Mm.331719	NM_053157	ENSMUSG00000028563	Tm2d1	2310026L18Rik|AA990549|Bbp	TM2 domain containing 1	protein-coding
common_peak2-31993-23-33--0.365695336741259-0.481798116163913	chr9	70678975	70679919	+	0	NA	intron (NM_008280, intron 1 of 8)	MTD|LTR|MaLR	103168	NM_008280	15450	Mm.390187	NM_008280	ENSMUSG00000032207	Lipc	AI256194|HL|Hpl	lipase, hepatic	protein-coding
common_peak2-25432-11-5-0.923731083530457-1.477227296591	chr19	3850444	3850911	+	0	NA	Intergenic	Intergenic	-1096	NM_001271496	12660	Mm.225505	NM_013490	ENSMUSG00000024843	Chka	CK|CK/EK-alpha|Chetk-alpha|Chk|ChoK|EK|EtnK-alpha	choline kinase alpha	protein-coding
common_peak2-24090-13-9-0.456543935750406-0.53895475198017	chr16	31602962	31603364	+	0	NA	Intergenic	Intergenic	-60366	NM_001252435	13383	Mm.382	NM_007862	ENSMUSG00000022770	Dlg1	B130052P05Rik|Dlgh1|E-dlg/SAP97|SAP-97|SAP97|mKIAA4187	discs, large homolog 1 (Drosophila)	protein-coding
common_peak2-29721-14-14--0.00767443525087419-0.308519316180257	chr6	84243838	84244445	+	0	NA	Intergenic	MER74A|LTR|ERVL	129691	NR_046063	100038556	Mm.387783	NR_046063		Gm10445	ENSMUSG00000072956	predicted gene 10445	ncRNA
common_peak2-25448-43-31-0.782563185523703-1.77490324686543	chr19	4134428	4135597	+	0	NA	TTS (NM_144532)	TTS (NM_144532)	4597	NM_144532	73660	Mm.379226	NM_144532	ENSMUSG00000024842	Cabp4	2410038D05Rik	calcium binding protein 4	protein-coding
common_peak2-23834-9-7-0.18961340640422-1.05908390183068	chr15	101522807	101523189	+	0	NA	exon (NM_008476, exon 4 of 9)	exon (NM_008476, exon 4 of 9)	-1058	NM_016879	53622	Mm.347934	NM_016879		Krt85	AA589597|BB007925|Hb5|Krt2-18	keratin 85	protein-coding
common_peak2-31541-19-10-0.943255708024389-1.16735254179725	chr8	111366425	111367084	+	0	NA	intron (NM_007496, intron 3 of 9)	intron (NM_007496, intron 3 of 9)	-94006	NR_037295	100526511		NR_037295		Mir3108	mmu-mir-3108	microRNA 3108	ncRNA
common_peak1-15002-18-13-0.505564229170747-0.625923329873571	chr3	108781054	108781821	+	0	NA	intron (NM_001163567, intron 10 of 10)	intron (NM_001163567, intron 10 of 10)	37962	NM_001078646	66715	Mm.158124	NM_025723	ENSMUSG00000045662	Henmt1	4921515J06Rik|Hen1|mHEN1	HEN1 methyltransferase homolog 1 (Arabidopsis)	protein-coding
common_peak2-21052-8-7-0.00522241794757061-1.00793137938329	chr11	43836195	43836607	+	0	NA	Intergenic	ORR1A4|LTR|MaLR	-121662	NM_001284381	11548	Mm.39086	NM_007416	ENSMUSG00000050541	Adra1b	[a]1b	adrenergic receptor, alpha 1b	protein-coding
common_peak1-16778-72-76-0.401797272177417-1.12865934592523	chr6	38433315	38435131	+	0	NA	intron (NM_177185, intron 12 of 16)	B2_Mm2|SINE|B2	-23102	NR_106130	102466843		NR_106130		Mir7670	mmu-mir-7670	microRNA mir-7670	ncRNA
common_peak1-10373-23-15-0.721767504509081-0.949797625454541	chr13	92844529	92845307	+	0	NA	intron (NM_009027, intron 1 of 23)	intron (NM_009027, intron 1 of 23)	56531	NM_009027	19418	Mm.248630	NM_009027		Rasgrf2	6330417G04Rik|AW048350|Grf2|Ras-GRF2	RAS protein-specific guanine nucleotide-releasing factor 2	protein-coding
unique_peak2-38663-3-13--2.22133801201688-2.36932189928148	chr7	98178322	98178848	+	0	NA	Intergenic	Lx3_Mus|LINE|L1	-60711	NM_011807	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
unique_peak2-37734-1-6--2.43441193227435-1.56314192529759	chr5	109903408	109903722	+	0	NA	Intergenic	AT_rich|Low_complexity|Low_complexity	54533	NM_001104628	384221	Mm.469879	NM_001104628	ENSMUSG00000091879	Vmn2r17	EG384221	vomeronasal 2, receptor 17	protein-coding
common_peak2-20798-130-281--0.447620269568932-2.74713214527326	chr10	122985013	122986787	+	0	NA	intron (NM_182807, intron 2 of 5)	intron (NM_182807, intron 2 of 5)	284768	NM_001252387	268354	Mm.51939	NM_182807	ENSMUSG00000044071	Fam19a2	6330575M02|FAM19A2 TAFA-2|TAFA2|Tafa-2	family with sequence similarity 19, member A2	protein-coding
unique_peak1-6754-10-6-0.549060422951165-1.21398586181642	chr8	54610131	54610717	+	0	NA	Intergenic	Intergenic	13368	NM_001005847	11593	Mm.334535	NM_001005847	ENSMUSG00000031521	Aga	AW060726	aspartylglucosaminidase	protein-coding
common_peak1-9676-9-9--0.132314688483142-1.03275496310833	chr12	8772016	8772575	+	0	NA	Intergenic	MLT1J|LTR|MaLR	-5907	NM_011519	20969	Mm.2580	NM_011519	ENSMUSG00000020592	Sdc1	AA408134|AA409076|CD138|Sstn|Synd|Synd1|syn-1	syndecan 1	protein-coding
unique_peak1-2421-7-1-1.79909083029819-1.80617997398389	chr15	100074430	100074938	+	0	NA	intron (NM_007497, intron 2 of 6)	B2_Mm2|SINE|B2	16394	NM_007497	11908	Mm.676	NM_007497	ENSMUSG00000023027	Atf1	-	activating transcription factor 1	protein-coding
common_peak1-8877-10-7-0.356415345008769-1.12966497611638	chr11	43836096	43836543	+	0	NA	Intergenic	Intergenic	-121580	NM_001284381	11548	Mm.39086	NM_007416	ENSMUSG00000050541	Adra1b	[a]1b	adrenergic receptor, alpha 1b	protein-coding
common_peak2-28086-18-23--0.272043349492805-0.34651636097721	chr4	83379264	83380380	+	0	NA	intron (NM_001081012, intron 21 of 25)	Lx5|LINE|L1	208373	NM_001081012	320226	Mm.180032	NM_029117	ENSMUSG00000052407	Ccdc171	4930418J05Rik|4930473A06Rik|A330015D16Rik	coiled-coil domain containing 171	protein-coding
unique_peak2-36626-0-6--3.64748585253182-1.56314192529759	chr3	101072892	101073141	+	0	NA	Intergenic	Intergenic	18846	NM_013486	12481	Mm.22842	NM_013486	ENSMUSG00000027863	Cd2	LFA-2|Ly-37|Ly37	CD2 antigen	protein-coding
unique_peak1-1033-12-0-3.64877598508764-4.21441993929574	chr11	76483045	76483780	+	0	NA	Intergenic	B1_Mur3|SINE|Alu	-2560	NM_177182	320522	Mm.131585	NM_177182	ENSMUSG00000044243	Bhlha9	A830053O21Rik	basic helix-loop-helix family, member a9	protein-coding
common_peak2-23012-32-31-0.27909201921966-0.499999074040591	chr14	62760259	62761145	+	0	NA	Intergenic	MTE-int|LTR|MaLR	151114	NM_173419	239133	Mm.127330	NM_173419	ENSMUSG00000048281	Dleu7	BC038059	deleted in lymphocytic leukemia, 7	protein-coding
unique_peak1-21-7-2-1.21412832957703-1.45399745587252	chr1	4801652	4802171	+	0	NA	intron (NM_008866, intron 2 of 8)	intron (NM_008866, intron 2 of 8)	3937	NM_008866	18777	Mm.299955	NM_008866	ENSMUSG00000025903	Lypla1	Pla1a	lysophospholipase 1	protein-coding
common_peak2-24332-23-34--0.407515512435886-0.533344939162177	chr17	3326506	3327336	+	0	NA	intron (NM_001122998, intron 1 of 26)	CpG	348	NM_001122998	24001	Mm.137134	NM_011878	ENSMUSG00000023800	Tiam2	3000002F19Rik|STEF|mKIAA2016	T cell lymphoma invasion and metastasis 2	protein-coding
common_peak2-31210-17-37--1.02963117523855-1.57996244908225	chr8	64946960	64947791	+	0	NA	Intergenic	Intergenic	-345385	NM_011922	26359	Mm.42179	NM_011922	ENSMUSG00000031635	Anxa10	-	annexin A10	protein-coding
unique_peak2-32609-3-11--1.99894559068043-1.95434855131066	chr1	97911167	97911602	+	0	NA	intron (NR_040467, intron 1 of 2)	intron (NR_040467, intron 1 of 2)	6951	NR_040467	73454	Mm.396229	NR_040467		1700063A18Rik	-	RIKEN cDNA 1700063A18 gene	ncRNA
unique_peak2-39619-11-6-0.701338662194009-1.32595962126035	chr9	90054462	90054970	+	0	NA	Intergenic	RLTR12B|LTR|ERVK	-3100	NM_001003911	108153	Mm.102141	NM_001003911	ENSMUSG00000032363	Adamts7	ADAM-TS7|ADAMTS7B	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 7	protein-coding
common_peak2-28851-11-9-0.186765489364251-0.344532117358383	chr5	73255654	73256067	+	0	NA	intron (NM_013689, intron 1 of 17)	intron (NM_013689, intron 1 of 17)	3827	NM_001113461	21682	Mm.319581	NM_013689	ENSMUSG00000029217	Tec	-	tec protein tyrosine kinase	protein-coding
unique_peak2-33681-2-7--1.91745425626332-1.45399745587252	chr11	102996645	102997088	+	0	NA	intron (NM_027658, intron 2 of 2)	intron (NM_027658, intron 2 of 2)	2193	NM_027658	71059	Mm.273871	NM_027658	ENSMUSG00000043372	Hexim2	4933402L21Rik	hexamethylene bis-acetamide inducible 2	protein-coding
common_peak2-25350-17-13-0.410941416147434-0.546772548767014	chr18	80169472	80170084	+	0	NA	Intergenic	Intergenic	-73856	NM_053117	93737	Mm.24678	NM_053117	ENSMUSG00000056214	Pard6g	2410049N21Rik|Par6a	par-6 family cell polarity regulator gamma	protein-coding
common_peak2-19782-13-8-0.608547029195456-0.660903317613904	chr1	84407082	84407689	+	0	NA	intron (NM_152915, intron 9 of 12)	intron (NM_152915, intron 9 of 12)	-126165	NM_001003948	98496	Mm.187470	NM_001003948	ENSMUSG00000045658	Pid1	5033414K04Rik|NYGGF4	phosphotyrosine interaction domain containing 1	protein-coding
common_peak2-23113-12-19--0.673152109799724-0.546772548767014	chr14	79481941	79482272	+	0	NA	intron (NM_027906, intron 27 of 44)	intron (NM_027906, intron 27 of 44)	165068	NM_001033215	105590	Mm.486536	NM_001033215	ENSMUSG00000071262	Zfp957	AU017455	zinc finger protein 957	protein-coding
common_peak2-28557-27-36--0.217907414733714-0.352152970649951	chr5	5343215	5344368	+	0	NA	intron (NM_011074, intron 2 of 14)	RLTR23|LTR|ERV1	36460	NM_011074	18647	Mm.389061	NM_011074	ENSMUSG00000028926	Cdk14	Pftk1|mKIAA0834	cyclin-dependent kinase 14	protein-coding
common_peak2-19610-15-20--0.380152672223105-0.397739447719386	chr1	34434819	34435474	+	0	NA	Intergenic	Intergenic	54898	NR_039562	100628580		NR_039562	miRBase:MI0018011	Mir5103	mmu-mir-5103|mu-mir-5103	microRNA 5103	ncRNA
unique_peak2-35938-4-7--1.02346051385325-1.09384600808989	chr19	9029612	9030147	+	0	NA	exon (NM_197993, exon 2 of 9)	exon (NM_197993, exon 2 of 9)	1539	NM_197993	70044	Mm.165979	NM_197993	ENSMUSG00000071645	Tut1	2700038E08Rik|PAPD2|Rbm21|TUTase6	terminal uridylyl transferase 1, U6 snRNA-specific	protein-coding
common_peak2-24048-28-25-0.352519401680371-0.541406350295756	chr16	25417773	25418554	+	0	NA	intron (NM_175165, intron 5 of 5)	intron (NM_175165, intron 5 of 5)	131260	NM_175165	71338	Mm.126851	NM_175165	ENSMUSG00000048399	Tprg	5430420C16Rik|Tprg1	transformation related protein 63 regulated	protein-coding
common_peak1-11666-73-55-0.885040084367618-3.51813163859042	chr16	25406151	25408306	+	0	NA	intron (NM_175165, intron 4 of 5)	intron (NM_175165, intron 4 of 5)	120325	NM_175165	71338	Mm.126851	NM_175165	ENSMUSG00000048399	Tprg	5430420C16Rik|Tprg1	transformation related protein 63 regulated	protein-coding
unique_peak2-36275-10-18--0.891512168434816-0.804350088532826	chr2	60703404	60704104	+	0	NA	intron (NM_020296, intron 1 of 13)	intron (NM_020296, intron 1 of 13)	15741	NM_001141932	56878	Mm.259667	NM_020296	ENSMUSG00000026970	Rbms1	2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1	RNA binding motif, single stranded interacting protein 1	protein-coding
common_peak2-31798-12-15--0.351224014912361-0.332077462497413	chr9	35267792	35268159	+	0	NA	intron (NM_021339, intron 6 of 18)	intron (NM_021339, intron 6 of 18)	8314	NM_021339	57810	Mm.80509	NM_021339	ENSMUSG00000038119	Cdon	CDO|Cd0|Orcam	cell adhesion molecule-related/down-regulated by oncogenes	protein-coding
unique_peak2-38217-12-23--0.936186515633517-0.912223620338476	chr6	114968599	114969155	+	0	NA	intron (NM_026894, intron 4 of 7)	MTC|LTR|MaLR	19015	NM_026894	68971	Mm.24937	NM_026894	ENSMUSG00000030316	Tamm41	1500001M20Rik|TAM41	TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)	protein-coding
unique_peak1-7320-12-7-0.648775985087639-0.697979855752659	chr9	120830622	120831347	+	0	NA	Intergenic	CT-rich|Low_complexity|Low_complexity	-6616	NR_040742	76402	Mm.436588	NR_040742		1700020M21Rik	-	RIKEN cDNA 1700020M21 gene	ncRNA
common_peak2-24634-35-27-0.6240153364049-1.10223211335955	chr17	34951548	34952637	+	0	NA	exon (NM_011413, exon 24 of 41)	exon (NM_011413, exon 24 of 41)	8307	NM_011413	625018	Mm.439678	NM_011413		C4a	Slp	complement component 4A (Rodgers blood group)	protein-coding
common_peak1-10149-8-12--0.695217300193522-0.475924844171029	chr13	35740649	35741132	+	0	NA	Intergenic	Intergenic	-10841	NM_009881	12593	Mm.29002	NM_009881	ENSMUSG00000059288	Cdyl	AI325931	chromodomain protein, Y chromosome-like	protein-coding
common_peak1-7582-11-7-0.508693584251613-1.21681515183528	chr1	52845068	52845655	+	0	NA	TTS (NM_008384)	TTS (NM_008384)	29171	NM_008384	16329	Mm.917	NM_008384	ENSMUSG00000026102	Inpp1	2300002C06Rik|AV137389	inositol polyphosphate-1-phosphatase	protein-coding
common_peak1-7909-25-53--0.893037596818362-1.84891677255723	chr1	136139788	136140793	+	0	NA	Intergenic	Intergenic	-8256	NM_001008533	11539	Mm.298908	NM_009629	ENSMUSG00000042429	Adora1	A1-AR|A1AR|A1R|AA1R|AI848715|BB176431|Ri	adenosine A1 receptor	protein-coding
common_peak2-23573-21-13-0.762134343208631-1.0220094258199	chr15	79670700	79671454	+	0	NA	Intergenic	Intergenic	-6314	NM_001013362	504193	Mm.38438	NM_029079	ENSMUSG00000022421	Npcd	Cbx6-Nptxr	neuronal pentraxin chromo domain	protein-coding
common_peak2-31307-23-26--0.0331199976543877-0.301029995663988	chr8	77548869	77549809	+	0	NA	intron (NM_178017, intron 9 of 10)	Lx9|LINE|L1	-8246	NM_001136259	21968	Mm.290868	NM_011622	ENSMUSG00000042870	Tom1	-	target of myb1 homolog (chicken)	protein-coding
common_peak1-18758-19-15-0.402687326661686-0.519193887192487	chr8	126663379	126664064	+	0	NA	Intergenic	Intergenic	-91573	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
common_peak1-12467-34-56--0.450821487163475-0.736813861928694	chr17	84085198	84086655	+	0	NA	Intergenic	Intergenic	-19577	NM_001171054	116871	Mm.277668	NM_054082	ENSMUSG00000055817	Mta3	1110002J22Rik|mKIAA1266	metastasis associated 3	protein-coding
common_peak2-24206-7-16--1.28837201095215-1.08658567012551	chr16	65565275	65565840	+	0	NA	Intergenic	Intergenic	-2615	NM_026879	68942	Mm.432944	NM_026879	ENSMUSG00000004843	Chmp2b	1190006E07Rik	charged multivesicular body protein 2B	protein-coding
common_peak2-26368-18-28--0.54506184389922-0.591915184368642	chr2	38987425	38988612	+	0	NA	intron (NM_178778, intron 3 of 17)	intron (NM_178778, intron 3 of 17)	29737	NR_033526	100042584	Mm.451696	NR_033526		Gm16523	A130054J05Rik	mitochondrial ribosomal protein L40 pseudogene	pseudo
unique_peak2-38537-4-5--0.608423014574403-0.909929411522249	chr7	47007457	47007807	+	0	NA	Intergenic	RLTR24|LTR|ERV1	234496	NM_001004139	70227	Mm.333800	NM_001004139	ENSMUSG00000068959	Zfp619	3000002G13Rik	zinc finger protein 619	protein-coding
unique_peak1-2349-9-6-0.382258484346616-1.11707584880836	chr15	85652581	85653097	+	0	NA	promoter-TSS (NM_011105)	promoter-TSS (NM_011105)	-676	NM_011105	18766	Mm.89965	NM_011105	ENSMUSG00000052496	Pkdrej	-	polycystic kidney disease (polycystin) and REJ (sperm receptor for egg jelly homolog, sea urchin)	protein-coding
common_peak2-20857-14-18--0.348711353085941-0.360333814299795	chr11	82870186	82871231	+	0	NA	Intergenic	MusHAL1|LINE|L1	-7906	NM_011408	20556	Mm.278689	NM_011408	ENSMUSG00000072620	Slfn2	Shlf2	schlafen 2	protein-coding
common_peak2-32111-118-186--0.0231017767650616-0.303377544836118	chr9	100642673	100644780	+	0	NA	intron (NM_009282, intron 4 of 33)	intron (NM_009282, intron 4 of 33)	99684	NM_009282	20842	Mm.42135	NM_009282	ENSMUSG00000037286	Stag1	AU045003|SA-1|Scc3	stromal antigen 1	protein-coding
unique_peak1-4067-20-6-1.68071986253359-2.41165147706372	chr2	65170703	65171563	+	0	NA	intron (NM_177074, intron 9 of 11)	intron (NM_177074, intron 9 of 11)	30950	NM_177074	320106	Mm.227703	NM_177074	ENSMUSG00000061171	Slc38a11	9330158F14Rik	solute carrier family 38, member 11	protein-coding
unique_peak1-1382-26-5-2.34293659143731-4.60318595491365	chr12	56289451	56290717	+	0	NA	3' UTR (NM_001100109, exon 16 of 16)	3' UTR (NM_001100109, exon 16 of 16)	-10495	NM_001100116	100101807	Mm.439875	NM_001100116		1700047I17Rik2	-	RIKEN cDNA 1700047I17 gene 2	protein-coding
unique_peak1-5206-13-4-1.45654393575041-2.23384849113406	chr5	35718722	35719274	+	0	NA	Intergenic	(TCTCCC)n|Simple_repeat|Simple_repeat	-12768	NM_010445	15371	Mm.358606	NM_010445	ENSMUSG00000067438	Hmx1	Nkx5-3	H6 homeobox 1	protein-coding
unique_peak2-38688-3-5--0.998945590680433-0.96108193396963	chr7	101414696	101415089	+	0	NA	Intergenic	L1MA6|LINE|L1	1186503	NM_021427	58238	Mm.113787	NM_021427		Fam181b	A830059I20Rik|AB041569	family with sequence similarity 181, member B	protein-coding
unique_peak1-5552-11-0-3.50869358425161-3.61235994796777	chr5	144316068	144316691	+	0	NA	intron (NM_026050, intron 2 of 2)	intron (NM_026050, intron 2 of 2)	6805	NM_026050	67238	Mm.383219	NM_026050	ENSMUSG00000048910	Fam220a	1500026F15Rik|2810453I06Rik|AW047776|Acpin1|Sipar	family with sequence similarity 220, member A	protein-coding
common_peak1-9365-15-17--0.157760250886656-0.307611222530528	chr11	97703381	97704080	+	0	NA	3' UTR (NM_001080935, exon 3 of 3)	3' UTR (NM_001080935, exon 3 of 3)	1636	NM_001080935	68127	Mm.110270	NM_001080935	ENSMUSG00000089676	B230217C12Rik	AI840637	RIKEN cDNA B230217C12 gene	protein-coding
unique_peak2-35059-7-14--1.10779976531033-0.817533494790411	chr16	11442774	11443471	+	0	NA	intron (NM_001290148, intron 4 of 13)	intron (NM_001290148, intron 4 of 13)	37381	NM_001290148	74478	Mm.325831	NM_028964	ENSMUSG00000071669	Snx29	4933437K13Rik|ENSMUSG00000079738|Gm11170|Gm1737|Gm930|Rundc2a	sorting nexin 29	protein-coding
unique_peak1-3915-17-2-2.63333383748388-3.75443312462699	chr2	24494430	24495258	+	0	NA	intron (NM_007579, intron 31 of 45)	intron (NM_007579, intron 31 of 45)	123828	NM_001042528	12287	Mm.4424	NM_007579	ENSMUSG00000004113	Cacna1b	AW050276|AW060892|AW822256|Cav2.2|Cchn1a|alpha(1B)	calcium channel, voltage-dependent, N type, alpha 1B subunit	protein-coding
common_peak2-28029-17-18--0.0296311752385474-0.306899554715732	chr4	53440477	53441498	+	0	NA	Intergenic	(TAGA)n|Simple_repeat|Simple_repeat	-12298	NM_001159633	100434	Mm.482207	NM_133891	ENSMUSG00000028412	Slc44a1	2210409B22Rik|4833416H08Rik|AW547365|CHTL1|CTL1|Cdw92	solute carrier family 44, member 1	protein-coding
unique_peak2-35707-2-6--1.72480917832092-1.26211192963361	chr18	32054053	32054499	+	0	NA	intron (NM_028866, intron 17 of 21)	MTD|LTR|MaLR	17281	NM_026006	67158	Mm.31537	NM_026006	ENSMUSG00000044982	Sft2d3	2610206C24Rik|AI847965|AW046173	SFT2 domain containing 3	protein-coding
common_peak1-12503-36-24-0.83546489639303-1.71114535657705	chr17	88626119	88627505	+	0	NA	Intergenic	MYSERV16_I-int|LTR|ERVK	101960	NM_001190356	225058	Mm.312053	NM_001190356		Gm4832	EG225058	predicted gene 4832	protein-coding
common_peak1-8100-25-12-1.16141018720401-1.87883858401928	chr1	181246027	181246961	+	0	NA	intron (NM_027188, intron 5 of 11)	intron (NM_027188, intron 5 of 11)	201640	NM_027188	69726	Mm.222338	NM_027188		Smyd3	2410008A19Rik|Zmynd1	SET and MYND domain containing 3	protein-coding
common_peak2-21913-57-67-0.17857019882859-0.451948128797766	chr12	10390591	10391637	+	0	NA	intron (NM_027588, intron 8 of 8)	B4A|SINE|B4	-6472	NM_023697	105014	Mm.119343	NM_023697	ENSMUSG00000020621	Rdh14	3110030G19Rik|AW215439|PAN2	retinol dehydrogenase 14 (all-trans and 9-cis)	protein-coding
common_peak1-13892-20-11-0.903112283870037-1.11267835143409	chr2	76672243	76673240	+	0	NA	intron (NM_011652, intron 152 of 312)	intron (NM_011652, intron 152 of 312)	147863	NM_028004	22138	Mm.373672	NM_011652	ENSMUSG00000051747	Ttn	1100001C23Rik|2310036G12Rik|2310057K23Rik|2310074I15Rik|AF006999|AV006427|D330041I19Rik|D830007G01Rik|L56|mdm|shru	titin	protein-coding
common_peak2-23141-31-65--0.81915544854533-1.99170400593892	chr14	105258555	105259452	+	0	NA	intron (NR_015593, intron 2 of 5)	intron (NR_015593, intron 2 of 5)	220639	NR_015593	320249	Mm.320725	NR_015593		D130009I18Rik	-	RIKEN cDNA D130009I18 gene	ncRNA
common_peak2-24983-7-5-0.214128329577033-1.01466476204226	chr18	9300481	9300889	+	0	NA	Intergenic	Intergenic	-17878	NM_153086	225152	Mm.119273	NM_153086	ENSMUSG00000036855	Gjd4	9430022F06Rik|Cx39	gap junction protein, delta 4	protein-coding
unique_peak2-39036-11-14--0.398197011356905-0.379391706698377	chr8	69208811	69209555	+	0	NA	intron (NM_016708, intron 1 of 1)	(TAGA)n|Simple_repeat|Simple_repeat	2810	NM_016708	18168	Mm.10685	NM_016708	ENSMUSG00000044014	Npy5r	NPY5-R|NPYY5-R|Y5R	neuropeptide Y receptor Y5	protein-coding
unique_peak1-3443-11-6-0.701338662194009-1.32595962126035	chr19	7310482	7310897	+	0	NA	intron (NM_027643, intron 1 of 7)	intron (NM_027643, intron 1 of 7)	5023	NM_027643	70999	Mm.329605	NM_027643	ENSMUSG00000024764	Naa40	4931433E08Rik|AU023197|Nat11	N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	protein-coding
unique_peak1-6402-10-2-1.77145284428761-2.09384600808989	chr7	80420677	80421230	+	0	NA	Intergenic	Intergenic	-34313	NR_105062	100505025	Mm.445959	NR_105062		LOC100505025	-	uncharacterized LOC100505025	ncRNA
unique_peak1-3138-30-6-2.36232048743427-5.46361714676356	chr18	36409466	36410602	+	0	NA	Intergenic	Intergenic	-30782	NM_008989	19290	Mm.231802	NM_008989		Pura	CAGER-1|Pur-alpha|ssCRE-BP	purine rich element binding protein A	protein-coding
unique_peak1-4593-16-2-2.53330114154691-3.78760380288747	chr3	59228721	59229524	+	0	NA	Intergenic	Intergenic	-80944	NM_001162884	242050	Mm.228086	NM_001162884	ENSMUSG00000036334	Igsf10	6530405F15Rik|9030224D03|AA409708|AA536958|AI414626|Adlican2|CMF608	immunoglobulin superfamily, member 10	protein-coding
unique_peak2-33899-0-5--3.42509343119537-1.32905871926422	chr12	52782847	52783275	+	0	NA	intron (NM_052973, intron 1 of 17)	ORR1C2|LTR|MaLR	-8892	NM_021710	11782	Mm.386749	NM_021710	ENSMUSG00000020955	Ap4s1	AI314282	adaptor-related protein complex AP-4, sigma 1	protein-coding
common_peak2-29610-42-53--0.0125581742962844-0.303059438674689	chr6	54038894	54040613	+	0	NA	intron (NM_001163640, intron 1 of 12)	intron (NM_001163640, intron 1 of 12)	49827	NM_001163640	69993	Mm.321147	NM_023543	ENSMUSG00000004633	Chn2	1700026N20Rik|4930557O16Rik|ARHGAP3|Bch	chimerin 2	protein-coding
common_peak2-20442-47-46-0.38025257308891-0.759155512401768	chr10	34483256	34484719	+	0	NA	Intergenic	L1Md_F2|LINE|L1	280781	NM_010237	14302	Mm.332432	NM_010237	ENSMUSG00000019779	Frk	BSK|BSK/IYK|C85044|GTK|RAK	fyn-related kinase	protein-coding
unique_peak2-37179-4-10--1.48289213249054-1.5150158574804	chr4	48584975	48585472	+	0	NA	Intergenic	(GAAA)n|Simple_repeat|Simple_repeat	-12842	NM_021436	230157	Mm.422686	NM_021436	ENSMUSG00000028347	Tmeff1	A830033E11|M7365|Tr1	transmembrane protein with EGF-like and two follistatin-like domains 1	protein-coding
common_peak2-30986-15-9-0.690236655668294-0.732381977911291	chr8	3608674	3609098	+	0	NA	exon (NM_001163749, exon 17 of 17)	exon (NM_001163749, exon 17 of 17)	12410	NM_026156	67439	Mm.23739	NM_026156	ENSMUSG00000019470	Xab2	0610041O14Rik|AV025587	XPA binding protein 2	protein-coding
unique_peak2-39806-1-7--2.62705701021674-1.80617997398389	chrX	21146734	21147012	+	0	NA	Intergenic	L1MEb|LINE|L1	85123	NM_007429	11609	Mm.2679	NM_007429	ENSMUSG00000068122	Agtr2	AI316812|AW107640	angiotensin II receptor, type 2	protein-coding
common_peak1-17729-22-30--0.30691220529947-0.399869693390336	chr7	80339230	80340263	+	0	NA	Intergenic	RMER19A|LTR|ERVK	-92792	NR_046024	625243	Mm.261798	NR_046024		Gm6567	-	predicted gene 6567	ncRNA
common_peak2-23162-16-14-0.211373046659543-0.364171515310935	chr14	121435409	121436047	+	0	NA	intron (NM_134082, intron 1 of 26)	intron (NM_134082, intron 1 of 26)	932	NM_134082	223254	Mm.223980	NM_134082	ENSMUSG00000025555	Farp1	AW228844|BC030329|Cdep	FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived)	protein-coding
common_peak2-23112-48-61-0.0167308408479396-0.308035049112922	chr14	79480530	79481918	+	0	NA	intron (NM_027906, intron 27 of 44)	intron (NM_027906, intron 27 of 44)	165950	NM_001033215	105590	Mm.486536	NM_001033215	ENSMUSG00000071262	Zfp957	AU017455	zinc finger protein 957	protein-coding
common_peak1-13731-9-10--0.269818212233077-1.05503135781948	chr2	32167369	32167891	+	0	NA	intron (NM_010065, intron 20 of 20)	CpG	-6350	NR_029811	387239		NR_029811	miRBase:MI0000714	Mir199b	Mirn199b	microRNA 199b	ncRNA
common_peak2-20032-25-50--0.810575436626389-1.52790159704429	chr1	136624576	136625626	+	0	NA	intron (NM_009307, intron 2 of 9)	intron (NM_009307, intron 2 of 9)	75197	NR_015606	329251	Mm.188709	NM_001081307	ENSMUSG00000073557	Ppp1r12b	1810037O03Rik|9530009M10Rik|AI132431|Mypt2	protein phosphatase 1, regulatory (inhibitor) subunit 12B	protein-coding
common_peak1-10299-8-17--1.16470258349474-1.02063122982878	chr13	64152532	64153047	+	0	NA	Intergenic	Intergenic	37720	NM_008291	15487	Mm.5109	NM_008291	ENSMUSG00000033122	Hsd17b3	-	hydroxysteroid (17-beta) dehydrogenase 3	protein-coding
common_peak1-16918-20-15-0.488074784591193-0.590343908676236	chr6	73221777	73222382	+	0	NA	intron (NM_019879, intron 7 of 8)	B3|SINE|B2	23580	NM_019879	56451	Mm.29845	NM_019879	ENSMUSG00000052738	Suclg1	1500000I01Rik|Sucla1	succinate-CoA ligase, GDP-forming, alpha subunit	protein-coding
common_peak2-20117-12-23--0.936186515633517-0.912223620338476	chr1	162570685	162571312	+	0	NA	intron (NM_013862, intron 12 of 20)	L1Md_A|LINE|L1	-63114	NM_001146330	620246	Mm.478780	NM_001146330		Gpr52	EG620246	G protein-coupled receptor 52	protein-coding
common_peak2-20334-4-5--0.608423014574403-0.909929411522249	chr10	4386769	4387022	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-37246	NM_001161822	56533	Mm.44606	NM_019958	ENSMUSG00000019775	Rgs17	6430507P11Rik|Rgsz2	regulator of G-protein signaling 17	protein-coding
common_peak2-27397-34-90--1.12572611319743-4.17952655038839	chr3	88177611	88178495	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-4411	NM_031368	12095	Mm.482191	NM_031368	ENSMUSG00000074489	Bglap3	AI461847|Bglap-rs1|ORG|mOC-X	bone gamma-carboxyglutamate protein 3	protein-coding
common_peak1-9389-53-31-1.14097301241593-3.80042730159129	chr11	99126872	99128575	+	0	NA	Intergenic	Intergenic	18829	NM_029393	75706	Mm.46378	NM_029393	ENSMUSG00000020913	Krt24	2310058N18Rik|2310075C18Rik	keratin 24	protein-coding
common_peak1-11955-22-29--0.259606490521114-0.36542888694933	chr17	5979002	5979912	+	0	NA	intron (NM_001113352, intron 2 of 25)	intron (NM_001113352, intron 2 of 25)	3871	NM_011523	20975	Mm.236068	NM_011523	ENSMUSG00000023805	Synj2	AI481647|SJ2|mKIAA0348	synaptojanin 2	protein-coding
unique_peak1-4327-16-5-1.53330114154691-1.80287260729378	chr2	151740565	151741268	+	0	NA	intron (NM_009641, intron 1 of 8)	intron (NM_009641, intron 1 of 8)	3848	NM_009641	11602	Mm.189536	NM_009641		Angpt4	Agpt4|Ang3	angiopoietin 4	protein-coding
common_peak1-11191-21-23--0.0154732354549205-0.305650498375555	chr15	77305868	77306714	+	0	NA	Intergenic	Intergenic	-1186	NM_177744	245282	Mm.390820	NM_177744	ENSMUSG00000050982	Apol10a	9030421J09Rik	apolipoprotein L 10A	protein-coding
common_peak1-16343-28-50--0.619466222150033-1.0624982013315	chr5	118459132	118460042	+	0	NA	3' UTR (NM_145564, exon 12 of 12)	3' UTR (NM_145564, exon 12 of 12)	-18246	NM_021344	57816	Mm.273285	NM_021344	ENSMUSG00000029359	Tesc	1010001A17Rik|2410011K10Rik|TE-1	tescalcin	protein-coding
common_peak1-18825-18-27--0.494435770829252-0.528262014464654	chr9	8017339	8017985	+	0	NA	Intergenic	Intergenic	-13066	NM_009534	22601	Mm.221992	NM_009534	ENSMUSG00000053110	Yap1	AI325207|Yap|Yap65|Yki|Yorkie	yes-associated protein 1	protein-coding
unique_peak1-1388-12-4-1.32684789020028-2.04196296489515	chr12	59011414	59012013	+	0	NA	Intergenic	Intergenic	-301078	NM_009216	20605	Mm.278336	NM_009216		Sstr1	SRIF-2|SS-1-R|SS1-R|SS1R|Smstr-1|Smstr1|sst1	somatostatin receptor 1	protein-coding
unique_peak1-1984-9-0-3.18961340640422-3.01029995663981	chr14	122069257	122069762	+	0	NA	intron (NM_001081039, intron 2 of 53)	intron (NM_001081039, intron 2 of 53)	28130	NM_001081039	105445	Mm.441054	NM_134074	ENSMUSG00000025558	Dock9	AA959601|AW538057|B230309H04Rik|D14Wsu89e|Zizimin1|mKIAA1058	dedicator of cytokinesis 9	protein-coding
unique_peak1-7080-10-2-1.77145284428761-2.09384600808989	chr9	21785030	21785574	+	0	NA	intron (NM_023622, intron 7 of 18)	intron (NM_023622, intron 7 of 18)	8595	NM_023622	71746	Mm.110594	NM_023622	ENSMUSG00000040146	Rgl3	1300003D20Rik|mFLJ00153	ral guanine nucleotide dissociation stimulator-like 3	protein-coding
common_peak2-24564-15-30--0.942031559831219-1.24110690293937	chr17	29268835	29269496	+	0	NA	Intergenic	Intergenic	-2836	NM_001002786	442827	Mm.440341	NM_001002786	ENSMUSG00000064147	Rab44	9830134C10Rik	RAB44, member RAS oncogene family	protein-coding
unique_peak2-37008-7-6--0.00826409175941478-0.97990265578305	chr3	122366249	122366685	+	0	NA	Intergenic	Intergenic	-43835	NM_153118	214459	Mm.209491	NM_153118	ENSMUSG00000039735	Fnbp1l	2610318I01Rik|AW548221|TOCA1|toca-1	formin binding protein 1-like	protein-coding
unique_peak1-532-9-1-2.18961340640422-2.31132995230379	chr1	185334616	185335133	+	0	NA	Intergenic	Intergenic	449955	NM_016928	53791	Mm.116894	NM_016928	ENSMUSG00000079164	Tlr5	-	toll-like receptor 5	protein-coding
unique_peak1-6690-9-2-1.60465090568306-1.87199725847353	chr8	26927356	26927903	+	0	NA	3' UTR (NM_001080793, exon 16 of 16)	3' UTR (NM_001080793, exon 16 of 16)	8644	NM_011485	20845	Mm.293314	NM_011485		Star	AV363654|D8Ertd419e	steroidogenic acute regulatory protein	protein-coding
unique_peak2-35972-6-15--1.4346018896197-1.16633110333236	chr19	19110149	19110813	+	0	NA	intron (NM_001043354, intron 1 of 9)	intron (NM_001043354, intron 1 of 9)	-34874	NM_001289921	225998	Mm.234641	NM_146095	ENSMUSG00000036192	Rorb	Nr1f2|RZR-beta|RZRB|Rorbeta	RAR-related orphan receptor beta	protein-coding
common_peak2-27134-81-75-0.62412208956498-2.31229383074526	chr3	27153197	27156025	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-61388	NM_009425	22035	Mm.1062	NM_009425	ENSMUSG00000039304	Tnfsf10	A330042I21Rik|AI448571|APO-2L|Ly81|TL2|Trail	tumor necrosis factor (ligand) superfamily, member 10	protein-coding
common_peak1-18736-13-7-0.778472030637769-0.817533494790411	chr8	123752953	123753696	+	0	NA	Intergenic	Intergenic	101739	NM_008024	14241	Mm.5111	NM_008024	ENSMUSG00000097084	Foxl1	FREAC7|Fkh6|fkh-6	forkhead box L1	protein-coding
common_peak2-30300-20-34--0.641208232353773-0.863762398024911	chr7	19572558	19573707	+	0	NA	exon (NM_194064, exon 1 of 1)	exon (NM_194064, exon 1 of 1)	259	NM_194064	378430	Mm.277153	NM_194064	ENSMUSG00000051965	Nanos2	nos2	nanos homolog 2 (Drosophila)	protein-coding
unique_peak2-34658-8-38--2.28017980091468-4.91804610622903	chr14	122463324	122465109	+	0	NA	Intergenic	Intergenic	30320	NM_001037744	223262	Mm.297637	NM_001037744	ENSMUSG00000071229	Timm8a2	-	translocase of inner mitochondrial membrane 8A2	protein-coding
common_peak1-12780-11-12--0.191746133889479-0.310474156842889	chr18	62001504	62002096	+	0	NA	intron (NM_001164491, intron 7 of 23)	MLT1K|LTR|MaLR	-55484	NM_178928	106877	Mm.26632	NM_178928	ENSMUSG00000033032	Afap1l1	AI173486	actin filament associated protein 1-like 1	protein-coding
common_peak2-19538-18-22--0.210642804828661-0.321718508207525	chr1	90603415	90604106	+	0	NA	Intergenic	Intergenic	-4994	NM_177305	320982	Mm.27968	NM_177305	ENSMUSG00000049866	Arl4c	A630084M22Rik|Arl7|LAK	ADP-ribosylation factor-like 4C	protein-coding
common_peak2-30072-60-91--0.169270094436482-0.402746000935361	chr6	131292664	131293819	+	0	NA	Intergenic	MTD|LTR|MaLR	-29396	NM_172891	243659	Mm.20114	NM_172891	ENSMUSG00000032899	Styk1	9130025L13|AI326477|Nok	serine/threonine/tyrosine kinase 1	protein-coding
common_peak1-9949-9-19--1.13231468848314-1.09394599973099	chr12	110991540	110992049	+	0	NA	Intergenic	Intergenic	5706	NR_037233	100499517		NR_037233	miRBase:MI0014035	Mir3072	mmu-mir-3072	microRNA 3072	ncRNA
common_peak1-10421-11-11--0.0762689164695427-0.301029995663976	chr13	99152492	99153039	+	0	NA	Intergenic	MLT1F2|LTR|MaLR	28565	NM_008242	15229	Mm.347441	NM_008242	ENSMUSG00000078302	Foxd1	AI385632|BF-2|FREAC4|Hfh10|Hfhbf2	forkhead box D1	protein-coding
unique_peak2-39288-3-7--1.41398308995928-1.23214870625617	chr8	122610939	122611361	+	0	NA	intron (NM_133967, intron 3 of 7)	intron (NM_133967, intron 3 of 7)	14222	NM_133967	102193	Mm.240076	NM_133967	ENSMUSG00000031823	Zdhhc7	AL024087|Gramp2	zinc finger, DHHC domain containing 7	protein-coding
unique_peak2-34770-0-6--3.64748585253182-1.56314192529759	chr15	59447500	59447879	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-32520	NM_144549	211770	Mm.40298	NM_144549	ENSMUSG00000032501	Trib1	A530090O15Rik|TRB-1|Trb1	tribbles homolog 1 (Drosophila)	protein-coding
common_peak1-13808-111-191--0.167268709310988-0.541093914393518	chr2	49451034	49452359	+	0	NA	Intergenic	Lx5|LINE|L1	-23138	NM_008449	16574	Mm.256342	NM_008449	ENSMUSG00000026764	Kif5c	KINN|Khc|NKHC|NKHC2	kinesin family member 5C	protein-coding
common_peak1-9366-26-36--0.281554273470488-0.419637632935626	chr11	97765919	97767054	+	0	NA	Intergenic	Intergenic	-21018	NM_001081435	72973	Mm.245939	NM_001081435		Fbxo47	2900052P03Rik|Gm1562	F-box protein 47	protein-coding
common_peak2-30676-11-16--0.578769256998726-0.503257505534083	chr7	105399368	105400086	+	0	NA	intron (NM_025408, intron 6 of 10)	ID_B1|SINE|B4	-51742	NM_001081167	272411	Mm.98333	NM_001081167	ENSMUSG00000074004	B3gnt6	BC039789|Core-3|Core3	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)	protein-coding
unique_peak2-38056-4-5--0.608423014574403-0.909929411522249	chr6	47559258	47559582	+	0	NA	Intergenic	AT_rich|Low_complexity|Low_complexity	-14391	NM_001146689	14056	Mm.246688	NM_007971	ENSMUSG00000029687	Ezh2	Enx-1|Enx1h|KMT6|mKIAA4065	enhancer of zeste homolog 2 (Drosophila)	protein-coding
unique_peak1-2718-14-7-0.899216160357645-0.947446088118041	chr16	92465495	92466222	+	0	NA	intron (NM_001081549, intron 1 of 3)	intron (NM_001081549, intron 1 of 3)	556	NM_001081549	54720	Mm.265744	NM_019466	ENSMUSG00000022951	Rcan1	Adapt78|CALP1L|CSP1|DSC1|Dscr1|MCIP1|RCN1	regulator of calcineurin 1	protein-coding
common_peak1-17934-17-18--0.0296311752385474-0.306899554715732	chr7	127273398	127274223	+	0	NA	Intergenic	ORR1E|LTR|MaLR	14994	NM_011775	22787	Mm.6510	NM_011775	ENSMUSG00000030911	Zp2	Zp-2	zona pellucida glycoprotein 2	protein-coding
common_peak2-24832-15-18--0.235762762887929-0.326591483156968	chr17	72955198	72955843	+	0	NA	Intergenic	Intergenic	-1873	NM_007439	11682	Mm.311854	NM_007439	ENSMUSG00000055471	Alk	CD246|Tcrz	anaplastic lymphoma kinase	protein-coding
unique_peak2-36073-3-8--1.58390809140159-1.39487600375387	chr19	53760596	53761099	+	0	NA	intron (NM_001170847, intron 1 of 13)	intron (NM_001170847, intron 1 of 13)	9051	NM_001170847	73713	Mm.313695	NM_001170847	ENSMUSG00000043639	Rbm20	1110018J23Rik|2010003H22Rik|AI646761	RNA binding motif protein 20	protein-coding
unique_peak2-35349-10-12--0.344024373132323-0.340565874754526	chr17	25133374	25133987	+	0	NA	intron (NM_020608, intron 4 of 20)	RMER15|LTR|ERVL	18495	NM_020608	57354	Mm.328854	NM_020608	ENSMUSG00000038002	Cramp1l	5830477H08Rik|AI256853|AI790734|Tce4|mKIAA1426	Crm, cramped-like (Drosophila)	protein-coding
unique_peak2-37857-7-10--0.660340788339108-1.12966497611638	chr5	136051186	136051618	+	0	NA	Intergenic	Intergenic	-2489	NM_019577	56221	Mm.31505	NM_019577	ENSMUSG00000004814	Ccl24	CKb-6|MPIF-2|Scya24	chemokine (C-C motif) ligand 24	protein-coding
common_peak1-19409-10-9-0.0344872501214071-1.05503135781948	chrX	73477354	73477894	+	0	NA	Intergenic	Intergenic	-32021	NM_001013760	238829	Mm.292319	NM_001013760	ENSMUSG00000071738	Gm4937	EG238829	predicted gene 4937	protein-coding
unique_peak1-3491-16-1-3.11826364226806-4.46429741251234	chr19	10926255	10927056	+	0	NA	intron (NM_023044, intron 2 of 7)	MLT1G1|LTR|MaLR	9621	NM_023044	65221	Mm.27387	NM_023044	ENSMUSG00000024737	Slc15a3	Ci1|cI-1	solute carrier family 15, member 3	protein-coding
unique_peak2-33104-10-49--2.28744084476596-6.40113897434953	chr10	80755067	80755928	+	0	NA	promoter-TSS (NM_001293646)	promoter-TSS (NM_001293646)	-211	NM_008844	18717	Mm.29836	NM_008844	ENSMUSG00000034902	Pip5k1c	AI115456|AI835305|Pip5kIgamma	phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma	protein-coding
common_peak2-20522-20-32--0.55631933476726-0.705485015404196	chr10	61680254	61680956	+	0	NA	intron (NM_197996, intron 1 of 7)	ORR1B1|LTR|MaLR	13361	NM_197996	70423	Mm.416781	NM_197996	ENSMUSG00000037031	Tspan15	1110036D12Rik|2700063A19Rik|AW048364|Tm4sf15	tetraspanin 15	protein-coding
common_peak1-16779-44-40-0.464340829950451-0.951347777694914	chr6	38532500	38533794	+	0	NA	intron (NM_001170848, intron 2 of 8)	B3A|SINE|B2	31703	NM_001170848	192196	Mm.276133	NM_138680	ENSMUSG00000029823	Luc7l2	4930471C18Rik|AA522013|AU015269|CGI59|Cgi74	LUC7-like 2 (S. cerevisiae)	protein-coding
unique_peak2-40012-1-6--2.43441193227435-1.56314192529759	chrY	70899927	70900293	+	0	NA	Intergenic	Intergenic	68512852	NM_001270512	100041505	Mm.491824	NM_001270512		Gm3376	Rbmy1b	predicted gene 3376	protein-coding
common_peak1-16329-44-50-0.14946749259704-0.400542309525533	chr5	117133478	117135115	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-92470	NM_026886	68955	Mm.146779	NM_026886	ENSMUSG00000063919	Srrm4	1500001A10Rik|B230202K19Rik|bv|mKIAA1853|nSR100	serine/arginine repetitive matrix 4	protein-coding
unique_peak2-38751-5-9--1.02630843089322-1.21398586181642	chr7	116504493	116504994	+	0	NA	intron (NM_054103, intron 1 of 13)	intron (NM_054103, intron 1 of 13)	77824	NM_054103	117229	Mm.389950	NM_054103	ENSMUSG00000031027	Stk33	4921505G21Rik|AW061264	serine/threonine kinase 33	protein-coding
unique_peak2-37347-9-8-0.0196884049619079-1.03275496310833	chr4	133369674	133370213	+	0	NA	Intergenic	CpG	-60417	NM_001080819	93760	Mm.22478	NM_001080819	ENSMUSG00000007880	Arid1a	1110030E03Rik|BAF250a|Osa1|Smarcf1	AT rich interactive domain 1A (SWI-like)	protein-coding
unique_peak2-37238-1-8--2.79698201165906-2.05605744720049	chr4	89526926	89527302	+	0	NA	Intergenic	L1ME1|LINE|L1	172225	NM_175647	242523	Mm.130167	NM_175647	ENSMUSG00000043753	Dmrta1	Dmrt4	doublesex and mab-3 related transcription factor like family A1	protein-coding
common_peak1-9269-29-13-1.30493515855751-2.5745355257554	chr11	87426131	87426823	+	0	NA	intron (NM_133215, intron 16 of 18)	intron (NM_133215, intron 16 of 18)	-4189	NM_001045527	327992	Mm.390371	NM_001045527	ENSMUSG00000070345	Hsf5	Gm739|MLZ-220	heat shock transcription factor family member 5	protein-coding
common_peak2-21544-7-9--0.522837264589173-1.05908390183068	chr11	95859424	95859890	+	0	NA	intron (NM_009951, intron 2 of 14)	B2_Mm2|SINE|B2	7601	NM_009951	140486	Mm.294769	NM_009951	ENSMUSG00000013415	Igf2bp1	AL024068|AW549074|CRD-BP|Crdbp|D030026A21Rik|D11Moh40e|D11Moh45|IMP-1|Neilsen|ZBP-1|Zbp1	insulin-like growth factor 2 mRNA binding protein 1	protein-coding
common_peak1-11663-29-52--0.615630373948088-1.02702006187975	chr16	25059094	25060392	+	0	NA	promoter-TSS (NR_040374)	promoter-TSS (NR_040374)	18	NR_040374	319487	Mm.137341	NR_040374	ENSMUSG00000096960	A230028O05Rik	-	RIKEN cDNA A230028O05 gene	ncRNA
common_peak2-22614-55-85--0.221644883549396-0.466412485092343	chr13	75707440	75708925	+	0	NA	Intergenic	RodERV21-int|LTR|ERV1	-74312	NR_030451	751556		NR_030451	miRBase:MI0004644	Mir682	Mirn682|mir-682|mmu-mir-682	microRNA 682	ncRNA
common_peak2-29381-172-190-0.601193851246145-4.85823754582774	chr6	30047121	30049147	+	0	NA	intron (NM_001164230, intron 4 of 11)	MTD|LTR|MaLR	21813	NM_001164229	18181	Mm.259258	NM_010938	ENSMUSG00000058440	Nrf1	C87038|D6Ertd415e	nuclear respiratory factor 1	protein-coding
common_peak1-14598-9-18--1.05831410703937-0.965105923112245	chr3	51415486	51415864	+	0	NA	Intergenic	Intergenic	-49440	NM_174995	211666	Mm.24679	NM_174995	ENSMUSG00000074604	Mgst2	GST2|MGST-II	microsomal glutathione S-transferase 2	protein-coding
common_peak2-20748-4-5--0.608423014574403-0.909929411522249	chr10	111544570	111544814	+	0	NA	3' UTR (NM_026223, exon 6 of 6)	3' UTR (NM_026223, exon 6 of 6)	24282	NM_026223	67537	Mm.292351	NM_026223	ENSMUSG00000020214	Glipr1l2	4921508O11Rik	GLI pathogenesis-related 1 like 2	protein-coding
common_peak2-30220-54-68-0.0645613048515647-0.325850200743459	chr7	141327370	141328825	+	0	NA	intron (NM_007400, intron 2 of 22)	intron (NM_007400, intron 2 of 22)	88683	NM_007400	11489	Mm.439714	NM_007400	ENSMUSG00000054555	Adam12	Mltna|mKIAA4001	a disintegrin and metallopeptidase domain 12 (meltrin alpha)	protein-coding
common_peak2-24553-10-5-0.771452844287613-1.33892459842472	chr17	28340787	28341143	+	0	NA	intron (NM_172617, intron 13 of 14)	B2_Mm2|SINE|B2	-3758	NM_027185	23853	Mm.204731	NM_027185	ENSMUSG00000002257	Def6	2410003F05Rik|6430538D02Rik|AV094905|Ibp|Slat|Slat2|Slat6	differentially expressed in FDCP 6	protein-coding
common_peak2-25942-90-63-1.05430502594215-5.85144202413309	chr19	46987904	46988931	+	0	NA	intron (NR_028353, intron 3 of 18)	RCHARR1|DNA|MER1_type	48424	NM_029810	76952	Mm.40965	NM_029810	ENSMUSG00000025041	Nt5c2	2010002I23Rik|CnII|ENSMUSG00000025039|Gm9751|Gmp|Nt5b|Pnt5|cN-II	5'-nucleotidase, cytosolic II	protein-coding
common_peak1-14173-26-21-0.468467473521165-0.647723624534446	chr2	141587140	141588429	+	0	NA	intron (NM_001013802, intron 7 of 18)	IAPLTR2_Mm|LTR|ERVK	-1090572	NM_178382	71436	Mm.426781	NM_178382	ENSMUSG00000051379	Flrt3	5530600M07Rik|C430047I10Rik|mKIAA1469	fibronectin leucine rich transmembrane protein 3	protein-coding
common_peak2-22827-7-7--0.200909169701811-0.97990265578305	chr14	20347715	20348040	+	0	NA	Intergenic	Intergenic	73932	NM_001024706	432825	Mm.327147	NM_001024706	ENSMUSG00000095024	Gm5458	EG432825	predicted gene 5458	protein-coding
unique_peak2-34468-8-14--0.901668177660948-0.660903317613906	chr14	31658610	31659286	+	0	NA	intron (NM_028839, intron 1 of 7)	intron (NM_028839, intron 1 of 7)	20168	NM_028839	69179	Mm.143025	NM_028839	ENSMUSG00000006526	Tmem110	1810038N08Rik|2310014H19Rik|AW554125	transmembrane protein 110	protein-coding
common_peak1-19156-32-51--0.421347698921432-0.649502410911277	chr9	92457358	92458387	+	0	NA	intron (NM_001142916, intron 1 of 19)	intron (NM_001142916, intron 1 of 19)	-20165	NR_029474	78575	Mm.407669	NR_029474		B430319G15Rik	D530025C14Rik	RIKEN cDNA B430319G15 gene	ncRNA
common_peak1-8622-29-65--0.932104038743343-2.28577929610735	chr10	117710132	117710769	+	0	NA	Intergenic	MTC|LTR|MaLR	21644	NM_054079	116849	Mm.213193	NM_054079	ENSMUSG00000090461	Iltifb	IL-22b|IL-TIFb|Il22b	interleukin 10-related T cell-derived inducible factor beta	protein-coding
common_peak1-10676-21-31--0.430510734733764-0.49501414494053	chr14	52304484	52305433	+	0	NA	Intergenic	Lx2|LINE|L1	31849	NM_001034102	545047	Mm.425915	NM_001034102	ENSMUSG00000068506	Gm5800	EG545047	predicted gene 5800	protein-coding
common_peak2-20301-16-14-0.211373046659543-0.364171515310935	chr1	194879791	194880297	+	0	NA	Intergenic	GA-rich|Low_complexity|Low_complexity	-18075	NM_181546	329324	Mm.76710	NM_181546	ENSMUSG00000016200	Syt14	B230320I09Rik|sytXIV	synaptotagmin XIV	protein-coding
unique_peak2-34959-5-11--1.28934283672701-1.477227296591	chr15	95884974	95885501	+	0	NA	Intergenic	ORR1B1|LTR|MaLR	24746	NR_003627	402773	Mm.210567	NM_001033483		D030018L15Rik	-	nuclear receptor coactivator 2 pseudogene	pseudo
unique_peak2-34378-3-16--2.50144593120962-3.03427613622886	chr13	114734512	114735314	+	0	NA	intron (NM_172595, intron 3 of 4)	intron (NM_172595, intron 3 of 4)	150197	NM_172595	218639	Mm.79837	NM_172595	ENSMUSG00000042348	Arl15	A430036I03|Arfrp2|C230032K13Rik	ADP-ribosylation factor-like 15	protein-coding
common_peak2-28161-15-23--0.5727977501655-0.575340103425218	chr4	107803352	107804319	+	0	NA	Intergenic	Intergenic	-12683	NM_011327	20280	Mm.379011	NM_011327	ENSMUSG00000028603	Scp2	AA409774|AA409893|C76618|C79031|NSL-TP|SCP-2|SCP-X|SCPX|ns-LTP	sterol carrier protein 2, liver	protein-coding
common_peak1-10060-44-47-0.236930333847379-0.510148353955622	chr13	21530380	21531500	+	0	NA	intron (NM_001012311, intron 1 of 3)	RMER6A|LTR|ERVK	1639	NM_001162919	319207	Mm.434384	NM_001012311	ENSMUSG00000055313	Pgbd1	4921509E05Rik	piggyBac transposable element derived 1	protein-coding
common_peak1-15041-8-12--0.695217300193522-0.475924844171029	chr3	121820137	121820665	+	0	NA	intron (NM_007378, intron 17 of 49)	intron (NM_007378, intron 17 of 49)	73023	NM_007378	11304	Mm.3918	NM_007378	ENSMUSG00000028125	Abca4	AW050280|Abc10|Abcr|D430003I15Rik|RmP	ATP-binding cassette, sub-family A (ABC1), member 4	protein-coding
unique_peak1-2868-10-3-1.35641534500877-1.75805390616669	chr17	34961227	34961773	+	0	NA	exon (NM_019442, exon 6 of 7)	exon (NM_019442, exon 6 of 7)	-1101	NM_011413	625018	Mm.439678	NM_011413		C4a	Slp	complement component 4A (Rodgers blood group)	protein-coding
unique_peak2-39862-12-21--0.810655633549659-0.713635438203849	chrX	73470029	73470970	+	0	NA	Intergenic	Lx9|LINE|L1	-39146	NM_001013760	238829	Mm.292319	NM_001013760	ENSMUSG00000071738	Gm4937	EG238829	predicted gene 4937	protein-coding
common_peak1-15095-45-29-0.953467429736353-2.44083020633064	chr3	130708778	130710088	+	0	NA	Intergenic	B3A|SINE|B2	-103782	NM_010703	16842	Mm.255219	NM_010703	ENSMUSG00000027985	Lef1	3000002B05|AI451430|Lef-1	lymphoid enhancer binding factor 1	protein-coding
common_peak1-9429-159-216-0.280357854989609-1.34508091632953	chr11	101640939	101642013	+	0	NA	intron (NM_008815, intron 4 of 12)	intron (NM_008815, intron 4 of 12)	5148	NM_008815	18612	Mm.5025	NM_008815	ENSMUSG00000017724	Etv4	AW414408|Pea-3|Pea3	ets variant 4	protein-coding
common_peak1-18272-35-89--1.06048283786717-3.85608468545679	chr8	34964770	34966002	+	0	NA	intron (NM_001042674, intron 4 of 7)	intron (NM_001042674, intron 4 of 7)	74949	NM_019733	19663	Mm.323997	NM_019733	ENSMUSG00000031586	Rbpms	2010300K22Rik|2700019M19Rik|AU017537|RBP-MS|hermes	RNA binding protein gene with multiple splicing	protein-coding
unique_peak1-1723-11-7-0.508693584251613-1.21681515183528	chr13	97295285	97295823	+	0	NA	intron (NM_012048, intron 1 of 14)	(CAGA)n|Simple_repeat|Simple_repeat	16886	NM_012048	27015	Mm.89926	NM_012048	ENSMUSG00000021668	Polk	Dinb1	polymerase (DNA directed), kappa	protein-coding
common_peak1-13495-18-10-0.853487532591054-1.03889213727317	chr2	35487472	35488238	+	0	NA	intron (NM_001290641, intron 1 of 15)	(TG)n|Simple_repeat|Simple_repeat	10354	NM_001114124	69601	Mm.29629	NM_001001602	ENSMUSG00000026883	Dab2ip	2310011D08Rik|AI480459|Aip1|mKIAA1743	disabled 2 interacting protein	protein-coding
common_peak2-29856-80-109-0.0692160528446921-0.335932833736598	chr6	99521085	99523806	+	0	NA	Intergenic	Intergenic	94320	NM_025829	66892	Mm.32889	NM_025829	ENSMUSG00000093661	Eif4e3	1300018P11Rik|AI451927|eIF4E-3	eukaryotic translation initiation factor 4E member 3	protein-coding
common_peak1-13289-32-46--0.275496832457978-0.426350872773373	chr19	38042498	38043619	+	0	NA	intron (NM_001099634, intron 16 of 52)	intron (NM_001099634, intron 16 of 52)	75009	NM_001099634	226101	Mm.34674	NM_177035	ENSMUSG00000048612	Myof	2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3	myoferlin	protein-coding
common_peak1-8619-22-40--0.710267899530679-1.05951140195658	chr10	117147807	117148586	+	0	NA	promoter-TSS (NM_010786)	promoter-TSS (NM_010786)	-382	NM_001288586	17246	Mm.22670	NM_010786	ENSMUSG00000020184	Mdm2	1700007J15Rik|AA415488|Mdm-2	transformed mouse 3T3 cell double minute 2	protein-coding
common_peak1-14285-19-23--0.18227517405947-0.320777457303847	chr2	157446869	157447539	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-55107	NM_016916	53619	Mm.480461	NM_016916	ENSMUSG00000067787	Blcap	AI462828|Bc10	bladder cancer associated protein homolog (human)	protein-coding
common_peak2-29076-27-49--0.652310238879489-1.08158034290998	chr5	118459240	118459822	+	0	NA	3' UTR (NM_145564, exon 12 of 12)	3' UTR (NM_145564, exon 12 of 12)	-18302	NM_021344	57816	Mm.273285	NM_021344	ENSMUSG00000029359	Tesc	1010001A17Rik|2410011K10Rik|TE-1	tescalcin	protein-coding
unique_peak2-39550-0-5--3.42509343119537-1.32905871926422	chr9	70011872	70012294	+	0	NA	Intergenic	Intergenic	-22719	NM_029784	76886	Mm.44355	NM_029784	ENSMUSG00000032224	Fam81a	6430514L14Rik	family with sequence similarity 81, member A	protein-coding
unique_peak2-39350-17-72--1.97152822067498-7.44625106102184	chr9	114015632	114017340	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	50014	NM_001101510	382111	Mm.376140	NM_001101510	ENSMUSG00000086596	Susd5	Gm1126	sushi domain containing 5	protein-coding
unique_peak1-952-11-3-1.50869358425161-1.95434855131066	chr11	58508922	58509397	+	0	NA	Intergenic	IAP-d-int|LTR|ERVK	-6046	NM_146500	258493	Mm.377534	NM_146500	ENSMUSG00000064044	Olfr319	MOR285-2	olfactory receptor 319	protein-coding
unique_peak2-39138-6-9--0.75652998450706-1.11707584880836	chr8	85083276	85083713	+	0	NA	Intergenic	Intergenic	-157009	NM_008357	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak1-10096-46-22-1.37443398719179-4.27512774575283	chr13	24824801	24826626	+	0	NA	TTS (NM_001286100)	TTS (NM_001286100)	28093	NM_020567	57441	Mm.12239	NM_020567	ENSMUSG00000006715	Gmnn	AW546347|Gem	geminin	protein-coding
common_peak2-20189-45-73--0.349095340284078-0.674812112184059	chr1	172501201	172502918	+	0	NA	intron (NM_001109985, intron 1 of 9)	intron (NM_001109985, intron 1 of 9)	-14818	NM_027528	70729	Mm.487078	NM_027528	ENSMUSG00000038473	Nos1ap	6330408P19Rik|Capon	nitric oxide synthase 1 (neuronal) adaptor protein	protein-coding
common_peak2-23263-11-16--0.578769256998726-0.503257505534083	chr15	25621853	25622302	+	0	NA	intron (NM_019472, intron 2 of 40)	L1M4|LINE|L1	69772	NM_019472	17909	Mm.60590	NM_019472	ENSMUSG00000022272	Myo10	AW048724|D15Ertd600e|mKIAA0799	myosin X	protein-coding
unique_peak1-5454-7-4-0.477162735410827-1.09384600808989	chr5	121586474	121586961	+	0	NA	intron (NM_011202, intron 14 of 15)	B1_Mm|SINE|Alu	54689	NM_001109992	19247	Mm.8681	NM_011202	ENSMUSG00000043733	Ptpn11	2700084A17Rik|AW536184|PTP1D|PTP2C|SAP-2|SH-PTP2|SH-PTP3|SHP-2|Shp2|Syp	protein tyrosine phosphatase, non-receptor type 11	protein-coding
common_peak2-27254-10-12--0.344024373132323-0.340565874754526	chr3	54755485	54756085	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-35976	NM_177854	329641	Mm.51187	NM_177854	ENSMUSG00000056306	Sertm1	6030405A18Rik	serine rich and transmembrane domain containing 1	protein-coding
unique_peak2-37743-7-7--0.200909169701811-0.97990265578305	chr5	110448745	110449247	+	0	NA	Intergenic	IAPEY3-int|LTR|ERVK	23450	NM_145563	69504	Mm.441438	NM_145563	ENSMUSG00000066613	Zfp932	2310001H12Rik|Znf431	zinc finger protein 932	protein-coding
common_peak2-24247-17-8-1.04837133676273-1.30305656033811	chr16	91547064	91547553	+	0	NA	promoter-TSS (NM_008338)	promoter-TSS (NM_008338)	-31	NM_008338	15980	Mm.249364	NM_008338		Ifngr2	Ifgr2|Ifgt	interferon gamma receptor 2	protein-coding
unique_peak1-276-10-7-0.356415345008769-1.12966497611638	chr1	98081142	98081630	+	0	NA	Intergenic	L1_Rod|LINE|L1	-163051	NR_040467	73454	Mm.396229	NR_040467		1700063A18Rik	-	RIKEN cDNA 1700063A18 gene	ncRNA
common_peak1-7481-19-29--0.504203268946832-0.580176690544129	chr1	4807479	4808488	+	0	NA	intron (NM_008866, intron 2 of 8)	MTA_Mm-int|LTR|MaLR	10009	NM_008866	18777	Mm.299955	NM_008866	ENSMUSG00000025903	Lypla1	Pla1a	lysophospholipase 1	protein-coding
common_peak2-22842-20-13-0.680719862533589-0.809260849721102	chr14	21075419	21075995	+	0	NA	Intergenic	(GGA)n|Simple_repeat|Simple_repeat	12677	NM_029006	74571	Mm.105571	NM_029006	ENSMUSG00000023387	Kcnk16	4731413G05Rik|TALK-1|TALK1	potassium channel, subfamily K, member 16	protein-coding
common_peak1-9044-47-33-0.847378583516209-2.13991130133362	chr11	64078932	64080233	+	0	NA	Intergenic	Intergenic	-169252	NM_178870	15478	Mm.340214	NM_178870	ENSMUSG00000047759	Hs3st3a1	3Ost3a|Hs3st3a	heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1	protein-coding
common_peak2-29991-10-17--0.813509656433543-0.699649909729472	chr6	122811761	122812647	+	0	NA	Intergenic	PB1D9|SINE|Alu	-6029	NM_009779	12267	Mm.2408	NM_009779	ENSMUSG00000040552	C3ar1	AZ3B|C3AR|HNFAG09	complement component 3a receptor 1	protein-coding
common_peak2-23117-10-13--0.450939577048835-0.386243247519795	chr14	79551458	79552114	+	0	NA	intron (NM_027906, intron 37 of 44)	intron (NM_027906, intron 37 of 44)	95388	NM_001033215	105590	Mm.486536	NM_001033215	ENSMUSG00000071262	Zfp957	AU017455	zinc finger protein 957	protein-coding
unique_peak1-4346-6-1-1.5653981103803-1.56314192529759	chr2	154603995	154604515	+	0	NA	Intergenic	ID_B1|SINE|B4	-12591	NM_001139512	19383	Mm.221440	NM_023130	ENSMUSG00000027593	Raly	AI663842|Merc	hnRNP-associated with lethal yellow	protein-coding
unique_peak2-33593-4-5--0.608423014574403-0.909929411522249	chr11	88234771	88235103	+	0	NA	intron (NM_054043, intron 7 of 13)	intron (NM_054043, intron 7 of 13)	68662	NR_039545	100628571		NR_039545	miRBase:MI0016973	Mir378b	mmu-mir-378b	microRNA 378b	ncRNA
common_peak2-28298-11-10-0.0492619656143161-0.31137425193576	chr4	132345105	132345737	+	0	NA	intron (NM_001033308, intron 3 of 5)	intron (NM_001033308, intron 3 of 5)	6858	NM_001033308	230787	Mm.290912	NM_001033308	ENSMUSG00000037731	Themis2	ICB-1	thymocyte selection associated family member 2	protein-coding
common_peak1-16468-12-11-0.0638134843664826-0.337263207250336	chr5	137072096	137072614	+	0	NA	Intergenic	B4|SINE|B4	-28995	NM_001291238	13047	Mm.320317	NM_009986	ENSMUSG00000029705	Cux1	CDP|Cutl1|Cux|Cux-1	cut-like homeobox 1	protein-coding
unique_peak2-36239-6-8--0.60452689106201-1.03789460276074	chr2	38934142	38934645	+	0	NA	intron (NM_178778, intron 17 of 17)	Lx7|LINE|L1	-13332	NM_029793	76899	Mm.131098	NM_029793	ENSMUSG00000026754	Golga1	0710001G09Rik|2210418B03Rik|AW107649|Golgi97|golgin-97	golgi autoantigen, golgin subfamily a, 1	protein-coding
unique_peak2-36446-5-23--2.28934283672701-3.02403524675804	chr2	135222399	135223122	+	0	NA	intron (NM_001145830, intron 31 of 31)	intron (NM_001145830, intron 31 of 31)	-181408	NR_040517	78805	Mm.78702	NR_040517	ENSMUSG00000085247	4930545L23Rik	-	RIKEN cDNA 4930545L23 gene	ncRNA
common_peak2-28793-12-8-0.478850983645327-0.562038191119709	chr5	64343886	64344388	+	0	NA	intron (NM_145923, intron 1 of 6)	MIR|SINE|MIR	15999	NM_145923	100532	Mm.243632	NM_145923	ENSMUSG00000047881	Rell1	AA536743	RELT-like 1	protein-coding
common_peak1-8860-38-71--0.598472342143782-1.27243322704912	chr11	32455073	32456137	+	0	NA	intron (NM_009288, intron 2 of 18)	intron (NM_009288, intron 2 of 18)	22339	NM_009288	20868	Mm.8235	NM_009288	ENSMUSG00000020272	Stk10	Gek1|Lok|mKIAA4026	serine/threonine kinase 10	protein-coding
common_peak1-11489-50-17-1.87101531503664-7.01056937775424	chr15	102392496	102394558	+	0	NA	intron (NM_146065, intron 3 of 10)	intron (NM_146065, intron 3 of 10)	-38154	NR_033409	54615	Mm.445915	NM_018787	ENSMUSG00000023052	Npff	-	neuropeptide FF-amide peptide precursor	protein-coding
common_peak1-8816-42-33-0.654866486616845-1.41268768702114	chr11	22287197	22288578	+	0	NA	Intergenic	RLTR13D3|LTR|ERVK	-101089	NM_001252515	216565	Mm.491265	NM_153078	ENSMUSG00000042302	Ehbp1	AF424697|Flj21950|NACSIN	EH domain binding protein 1	protein-coding
common_peak1-12200-26-14-1.02100849654994-1.59386218057211	chr17	32946583	32947752	+	0	NA	promoter-TSS (NM_183177)	promoter-TSS (NM_183177)	-291	NM_183177	240063	Mm.30675	NM_183177		Zfp811	BC052046	zinc finger protein 811	protein-coding
common_peak2-20360-11-11--0.0762689164695427-0.301029995663976	chr10	12694134	12694634	+	0	NA	Intergenic	Lx6|LINE|L1	-10319	NM_001163591	74732	Mm.248648	NM_029075	ENSMUSG00000039232	Stx11	5830405C08Rik	syntaxin 11	protein-coding
common_peak1-12870-23-13-0.914412582451476-1.26025077975594	chr18	76063254	76064150	+	0	NA	intron (NM_145356, intron 2 of 4)	intron (NM_145356, intron 2 of 4)	83870	NM_145356	207259	Mm.159332	NM_145356	ENSMUSG00000044646	Zbtb7c	B230208J24Rik|Kr-pok|Zbtb36	zinc finger and BTB domain containing 7C	protein-coding
unique_peak1-4294-23-4-2.39983940962172-4.21583923654667	chr2	144364394	144365339	+	0	NA	3' UTR (NM_029763, exon 9 of 9)	3' UTR (NM_029763, exon 9 of 9)	11385	NM_029763	70408	Mm.389351	NM_029763	ENSMUSG00000027427	Polr3f	2810411G20Rik|3010019O03Rik|3110032A07Rik|RPC39|RPC6	polymerase (RNA) III (DNA directed) polypeptide F	protein-coding
common_peak1-14775-55-71-0.0346948697103899-0.31450906201653	chr3	88770709	88772051	+	0	NA	intron (NM_138679, intron 1 of 26)	RMER13B|LTR|ERVK	1646	NM_138679	192195	Mm.130752	NM_138679	ENSMUSG00000028053	Ash1l	8030453L17Rik|Ash1|E430018P19Rik|Kmt2h	ash1 (absent, small, or homeotic)-like (Drosophila)	protein-coding
common_peak2-22793-6-7--0.434601889619698-0.97990265578305	chr14	7934456	7934877	+	0	NA	intron (NM_001024712, intron 2 of 6)	intron (NM_001024712, intron 2 of 6)	3305	NM_001024712	100042149	Mm.396155	NM_001024712	ENSMUSG00000092167	Gm3696	544988|ENSMUSG00000056940|Gm10014	predicted gene 3696	protein-coding
common_peak1-15029-7-11--0.785871670422967-1.21681515183528	chr3	121560238	121560762	+	0	NA	Intergenic	Lx8|LINE|L1	-42367	NM_008991	19299	Mm.399042	NM_008991	ENSMUSG00000028127	Abcd3	AI313901|AU018866|AW146054|PMP68|PMP70|Pxmp1	ATP-binding cassette, sub-family D (ALD), member 3	protein-coding
common_peak1-16256-13-6-0.971117108580164-1.01572999746118	chr5	105731048	105731541	+	0	NA	Intergenic	RMER17C-int|LTR|ERVK	-8576	NM_194336	100702	Mm.491210	NM_194336	ENSMUSG00000079362	Gbp6	AI595338|Mpa2l	guanylate binding protein 6	protein-coding
common_peak2-23711-29-43--0.347141538022187-0.479515789778906	chr15	89211399	89212069	+	0	NA	Intergenic	B3|SINE|B2	-2049	NM_001013022	70113	Mm.247273	NM_001013022	ENSMUSG00000047394	Odf3b	2010001J22Rik	outer dense fiber of sperm tails 3B	protein-coding
unique_peak2-39982-4-20--2.41577793663201-2.82951996911245	chrX	153723525	153724078	+	0	NA	intron (NM_011077, intron 12 of 21)	L1Md_T|LINE|L1	129417	NM_011077	18675	Mm.2529	NM_011077	ENSMUSG00000057457	Phex	Gy|HPDR|HPDR1|Hyp|PEX	phosphate regulating endopeptidase homolog, X-linked	protein-coding
unique_peak1-2690-9-3-1.18961340640422-1.57096726280955	chr16	76992118	76992740	+	0	NA	Intergenic	MusHAL1|LINE|L1	18697	NR_040573	76601	Mm.396217	NR_040573		1700041M19Rik	-	RIKEN cDNA 1700041M19 gene	ncRNA
common_peak1-14294-23-30--0.232428805877794-0.363124929330844	chr2	158360847	158361794	+	0	NA	intron (NM_001145015, intron 6 of 14)	intron (NM_001145015, intron 6 of 14)	22788	NM_001145015	545481	Mm.125371	NM_001145015	ENSMUSG00000074625	Arhgap40	C20orf95|Gm14203|OTTMUSG00000015933	Rho GTPase activating protein 40	protein-coding
common_peak1-15915-16-18--0.129663871175524-0.307235046933848	chr5	23783007	23783872	+	0	NA	Intergenic	Intergenic	20093	NR_030454	735274		NR_030454		Mir684-1	Mirn684-1	microRNA 684-1	ncRNA
common_peak1-17511-7-5-0.214128329577033-1.01466476204226	chr7	27472767	27473281	+	0	NA	Intergenic	B3|SINE|B2	-1575	NM_001081148	243881	Mm.294678	NM_001081148	ENSMUSG00000040650	Cyp2b23	EG243881	cytochrome P450, family 2, subfamily b, polypeptide 23	protein-coding
common_peak2-25390-90-66-0.98821583548438-5.29640492165038	chr19	40894201	40895432	+	0	NA	Intergenic	Lx2B|LINE|L1	-10953	NM_172839	240665	Mm.309	NM_172839	ENSMUSG00000025010	Ccnj	D430039C20Rik	cyclin J	protein-coding
common_peak1-11370-26-41--0.464418330620298-0.672592695851323	chr15	94628718	94629746	+	0	NA	intron (NM_178789, intron 3 of 7)	intron (NM_178789, intron 3 of 7)	169616	NM_178789	320709	Mm.74873	NM_178789	ENSMUSG00000063296	Tmem117	B930062P21Rik	transmembrane protein 117	protein-coding
unique_peak1-5251-7-0-2.79909083029819-2.40823996531185	chr5	53559467	53560038	+	0	NA	intron (NM_172710, intron 9 of 23)	intron (NM_172710, intron 9 of 23)	44939	NM_172710	231238	Mm.235020	NM_172710	ENSMUSG00000029189	Sel1l3	2310045A20Rik|AI429585|mKIAA0746	sel-1 suppressor of lin-12-like 3 (C. elegans)	protein-coding
common_peak2-28714-7-8--0.370834171144123-1.00793137938329	chr5	35723140	35723671	+	0	NA	Intergenic	Intergenic	-8361	NM_010445	15371	Mm.358606	NM_010445	ENSMUSG00000067438	Hmx1	Nkx5-3	H6 homeobox 1	protein-coding
unique_peak2-36871-4-7--1.02346051385325-1.09384600808989	chr3	93516926	93517285	+	0	NA	Intergenic	RLTR45-int|LTR|ERVK	-36900	NM_148949	207213	Mm.425165	NM_148949	ENSMUSG00000094084	Tdpoz1	2cpoz56|Mapp2|Spopl1	TD and POZ domain containing 1	protein-coding
common_peak1-12724-14-16--0.188246680892695-0.308035960714963	chr18	53249879	53250712	+	0	NA	Intergenic	Intergenic	-85724	NM_026386	67804	Mm.252171	NM_026386	ENSMUSG00000034484	Snx2	0610030A03Rik	sorting nexin 2	protein-coding
common_peak2-28093-13-21--0.680959587999529-0.607095980551316	chr4	86674208	86675000	+	0	NA	intron (NM_172426, intron 6 of 10)	intron (NM_172426, intron 6 of 10)	154286	NM_139306	230379	Mm.45019	NM_139306	ENSMUSG00000038007	Acer2	2410116I05Rik|Asah3l|CRG-L1|maCER2	alkaline ceramidase 2	protein-coding
unique_peak2-33383-7-7--0.200909169701811-0.97990265578305	chr11	48837599	48838039	+	0	NA	Intergenic	L1Md_F3|LINE|L1	-26416	NM_010999	18356	Mm.24769	NM_010999	ENSMUSG00000040328	Olfr56	IF7|MOR276-1	olfactory receptor 56	protein-coding
common_peak1-17975-13-13--0.0288828914198356-0.309074325783021	chr7	133112407	133113122	+	0	NA	intron (NM_001101488, intron 2 of 6)	intron (NM_001101488, intron 2 of 6)	113161	NM_001101488	269994	Mm.39599	NM_001101488	ENSMUSG00000046182	Gsg1l	AI852434|C230098I05Rik|G630023A01Rik|Gm637|g1l	GSG1-like	protein-coding
unique_peak2-39972-6-10--0.894033508256995-1.21398586181642	chrX	150588229	150588788	+	0	NA	intron (NM_001243032, intron 2 of 2)	intron (NM_001243032, intron 2 of 2)	2922	NM_001243032	635580	Mm.359509	NM_001243032		Gm16445	EG667285	predicted pseudogene 16445	protein-coding
unique_peak2-37313-11-24--1.13516260552311-1.3750876294627	chr4	125029842	125030806	+	0	NA	Intergenic	L1MC1|LINE|L1	-137751	NM_001081097	14807	Mm.40896	NM_001081097	ENSMUSG00000001985	Grik3	9630027E11|GluK3|GluR7-3|Glur-7|Glur7	glutamate receptor, ionotropic, kainate 3	protein-coding
unique_peak2-34213-4-6--0.830815435910851-0.989110657569874	chr13	44642791	44643197	+	0	NA	Intergenic	Intergenic	107898	NR_045489	69491	Mm.392410	NR_045489	ENSMUSG00000098144	1700029N11Rik	-	RIKEN cDNA 1700029N11 gene	ncRNA
unique_peak2-37588-5-9--1.02630843089322-1.21398586181642	chr5	39645004	39645524	+	0	NA	Intergenic	Intergenic	349549	NR_045416	75095	Mm.332354	NR_045416		4930513D17Rik	-	RIKEN cDNA 4930513D17 gene	ncRNA
common_peak1-15162-52-78--0.195520757911404-0.420757421015467	chr3	146851858	146852807	+	0	NA	Intergenic	Intergenic	337001	NM_027594	70892	Mm.187793	NM_027594	ENSMUSG00000036745	Ttll7	1110049N09Rik|4921517B04Rik|C630030B20|Ttll7s	tubulin tyrosine ligase-like family, member 7	protein-coding
common_peak1-15101-22-24-0.00342791531268016-0.305461879681376	chr3	132871525	132872431	+	0	NA	intron (NM_029953, intron 1 of 3)	ID_B1|SINE|B4	25875	NM_029953	77669	Mm.98630	NM_029953	ENSMUSG00000040969	Arhgef38	9130221D24Rik	Rho guanine nucleotide exchange factor (GEF) 38	protein-coding
unique_peak1-3716-13-2-2.19350952991661-3.03832868024006	chr19	45059421	45059787	+	0	NA	promoter-TSS (NR_040294)	promoter-TSS (NR_040294)	-564	NR_040294	73894	Mm.491408	NR_040294		4930414N06Rik	-	RIKEN cDNA 4930414N06 gene	ncRNA
unique_peak2-37876-5-7--0.704380336005853-1.01466476204226	chr5	138620780	138621219	+	0	NA	intron (NM_009315, intron 13 of 14)	intron (NM_009315, intron 13 of 14)	7415	NM_009315	21343	Mm.248517	NM_009315	ENSMUSG00000036980	Taf6	80kDa|AW549759|TAF(II)80|TAFII70|Taf2e|p80	TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor	protein-coding
common_peak2-28733-17-32--0.826097781153416-1.02859851787301	chr5	36465144	36465768	+	0	NA	intron (NM_030889, intron 3 of 26)	B4A|SINE|B4	-81214	NM_175249	76943	Mm.44242	NM_175249	ENSMUSG00000043430	Psapl1	2310020A21Rik	prosaposin-like 1	protein-coding
common_peak1-9038-11-10-0.0492619656143161-0.31137425193576	chr11	62602715	62603183	+	0	NA	promoter-TSS (NM_138949)	promoter-TSS (NM_138949)	-30	NM_138949	192651	Mm.168530	NM_138949	ENSMUSG00000047342	Zfp286	BC027023	zinc finger protein 286	protein-coding
unique_peak1-4741-11-4-1.18676548936425-1.68134727924692	chr3	108328129	108328833	+	0	NA	intron (NM_001033304, intron 1 of 20)	L1_Mus1|LINE|L1	10959	NM_001033304	229722	Mm.316890	NM_001033304	ENSMUSG00000040412	5330417C22Rik	BB183350|Kiaa1324|mKIAA1324	RIKEN cDNA 5330417C22 gene	protein-coding
common_peak1-17082-29-26-0.357402578451643-0.590428395010953	chr6	108668246	108669208	+	0	NA	Intergenic	Intergenic	-57799	NR_104577	75394	Mm.395061	NR_040757	ENSMUSG00000087341	0610040F04Rik	-	RIKEN cDNA 0610040F04 gene	ncRNA
unique_peak2-37365-6-5--0.0195643903408542-0.947717972411649	chr4	136139739	136140136	+	0	NA	intron (NM_133872, intron 2 of 18)	intron (NM_133872, intron 2 of 18)	18701	NM_133872	99982	Mm.28540	NM_133872	ENSMUSG00000036940	Kdm1a	1810043O07Rik|AA408884|Aof2|D4Ertd478e|Kdm1|Lsd1|mKIAA0601	lysine (K)-specific demethylase 1A	protein-coding
unique_peak2-36010-5-11--1.28934283672701-1.477227296591	chr19	38608897	38609400	+	0	NA	intron (NM_019588, intron 1 of 31)	RLTR10C|LTR|ERVK	10461	NM_019588	74055	Mm.34031	NM_019588	ENSMUSG00000024998	Plce1	4933403A21Rik|PLCepsilon|Plce|mKIAA1516	phospholipase C, epsilon 1	protein-coding
unique_peak1-3864-9-2-1.60465090568306-1.87199725847353	chr2	9140405	9140956	+	0	NA	Intergenic	L1Md_T|LINE|L1	29538	NR_038180	73438	Mm.23558	NR_038180	ENSMUSG00000085580	1700061F12Rik	-	RIKEN cDNA 1700061F12 gene	ncRNA
common_peak2-25684-51-49-0.431067635827849-0.910002444715788	chr19	12010092	12011216	+	0	NA	intron (NM_172635, intron 14 of 18)	RLTR22_Mus|LTR|ERVK	12436	NR_105960	102465601		NR_105960		Mir6994	mmu-mir-6994	microRNA mir-6994	ncRNA
common_peak2-24367-155-172-0.56297227217674-3.90425899014213	chr17	6827006	6829178	+	0	NA	Intergenic	Intergenic	-2449	NR_028305	100040525	Mm.472852	NR_028305		Tmem181c-ps	100040596|ENSMUSG00000079729|ENSMUSG00000079731|Tmem181d-ps	transmembrane protein 181C, pseudogene	pseudo
unique_peak1-899-13-4-1.45654393575041-2.23384849113406	chr11	35950204	35950729	+	0	NA	intron (NM_011856, intron 12 of 28)	intron (NM_011856, intron 12 of 28)	-156875	NM_170779	211652	Mm.31267	NM_170779		Wwc1	AA408228|AU017197|BC037006|Kibra|mKIAA0869	WW, C2 and coiled-coil domain containing 1	protein-coding
common_peak1-17296-9-8-0.0196884049619079-1.03275496310833	chr6	136901006	136901539	+	0	NA	Intergenic	RMER17C|LTR|ERVK	-1772	NM_023898	78600	Mm.290622	NM_023898		Pde6h	A930033D18Rik|PDEgamma	phosphodiesterase 6H, cGMP-specific, cone, gamma	protein-coding
unique_peak2-37922-6-5--0.0195643903408542-0.947717972411649	chr5	144944733	144945166	+	0	NA	intron (NM_001081109, intron 13 of 13)	intron (NM_001081109, intron 13 of 13)	-6206	NM_010800	17341	Mm.386767	NM_010800	ENSMUSG00000052271	Bhlha15	1810009C13Rik|Bhlhb8|MIST-1|Mist1	basic helix-loop-helix family, member a15	protein-coding
common_peak2-25976-31-21-0.765807052175826-1.27201509741564	chr19	53554540	53555336	+	0	NA	Intergenic	PB1D10|SINE|Alu	-15652	NR_028427	381232	Mm.248624	NR_028427	ENSMUSG00000097636	5830416P10Rik	4833407H14Rik|5430437C04Rik|ENSMUSG00000074788|Gm10758	RIKEN cDNA 5830416P10 gene	ncRNA
unique_peak2-37834-5-4--0.0263084308932156-0.909929411522249	chr5	134099009	134099295	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-476466	NM_030719	80909	Mm.45218	NM_030719		Gatsl2	7530428J21Rik|AW742413|Gats|Gatsl1	GATS protein-like 2	protein-coding
unique_peak1-4392-13-6-0.971117108580164-1.01572999746118	chr2	164512750	164513510	+	0	NA	TTS (NM_001012704)	TTS (NM_001012704)	2523	NM_001012704	408190	Mm.376205	NM_001012704	ENSMUSG00000067704	Wfdc13	Wfdc13l1	WAP four-disulfide core domain 13	protein-coding
common_peak2-28604-17-10-0.75886471956774-0.917676348953458	chr5	23616248	23616790	+	0	NA	intron (NM_026448, intron 1 of 10)	RMER21A|LTR|ERV1	10111	NM_026448	52323	Mm.273768	NM_026448	ENSMUSG00000028986	Klhl7	2700038B03Rik|D5Ertd363e|SBBI26	kelch-like 7	protein-coding
unique_peak2-36870-6-11--1.01956439034085-1.32595962126035	chr3	93506510	93506951	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-26525	NM_148949	207213	Mm.425165	NM_148949	ENSMUSG00000094084	Tdpoz1	2cpoz56|Mapp2|Spopl1	TD and POZ domain containing 1	protein-coding
unique_peak2-35943-2-5--1.50241675698448-1.08602067057793	chr19	9966065	9966444	+	0	NA	intron (NM_016692, intron 4 of 17)	intron (NM_016692, intron 4 of 17)	7769	NM_016692	16319	Mm.29755	NM_016692	ENSMUSG00000024660	Incenp	2700067E22Rik|AU019509|C130081E20|C77457	inner centromere protein	protein-coding
common_peak1-13884-71-66-0.578354988262199-1.82396640699901	chr2	75612600	75614965	+	0	NA	Intergenic	Intergenic	-56452	NM_172666	228061	Mm.31227	NM_172666	ENSMUSG00000042410	Agps	5832437L22|9930035G10Rik|AW123847|Adaps|Adas|Adhaps|Adps|Aldhpsy|bs2	alkylglycerone phosphate synthase	protein-coding
unique_peak1-7049-11-4-1.18676548936425-1.68134727924692	chr9	35110534	35111008	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	22081	NR_040715	71133	Mm.158577	NR_040715		4933422A05Rik	-	RIKEN cDNA 4933422A05 gene	ncRNA
common_peak1-12143-20-8-1.31814978314888-1.77631109801764	chr17	27839125	27840044	+	0	NA	intron (NM_001286743, intron 2 of 9)	CpG	17400	NM_178365	23969	Mm.4926	NM_011861	ENSMUSG00000040276	Pacsin1	A830061D09Rik|H74|mKIAA1379|syndapin	protein kinase C and casein kinase substrate in neurons 1	protein-coding
unique_peak2-37107-3-6--1.22133801201688-1.08602067057793	chr4	133545594	133546005	+	0	NA	intron (NM_026144, intron 6 of 8)	intron (NM_026144, intron 6 of 8)	10980	NM_026144	67422	Mm.100290	NM_026144	ENSMUSG00000012117	Dhdds	3222401G21Rik|CIT|DS|HDS|W91638	dehydrodolichyl diphosphate synthase	protein-coding
common_peak1-18903-14-21--0.560215458279653-0.519193887192484	chr9	40192074	40192761	+	0	NA	intron (NM_172768, intron 2 of 19)	intron (NM_172768, intron 2 of 19)	51360	NR_040728	73558	Mm.398307	NR_040728		1700110K17Rik	-	RIKEN cDNA 1700110K17 gene	ncRNA
common_peak1-14179-70-71-0.450041914933086-1.24174436008482	chr2	144009746	144011497	+	0	NA	intron (NM_001033778, intron 1 of 3)	intron (NM_001033778, intron 1 of 3)	4405	NM_001033778	433481	Mm.330630	NM_001033778		Gm5535	EG433481	predicted gene 5535	protein-coding
unique_peak2-33758-0-9--4.16205902536157-2.31132995230379	chr11	117788494	117788932	+	0	NA	Intergenic	MTC|LTR|MaLR	41967	NM_007707	12702	Mm.3468	NM_007707	ENSMUSG00000053113	Socs3	Cis3|Cish3|EF-10|Ef10|SSI-3|Ssi3	suppressor of cytokine signaling 3	protein-coding
unique_peak1-5863-17-2-2.63333383748388-3.75443312462699	chr6	84327205	84328256	+	0	NA	Intergenic	B3A|SINE|B2	46102	NR_046063	100038556	Mm.387783	NR_046063		Gm10445	ENSMUSG00000072956	predicted gene 10445	ncRNA
common_peak1-9987-66-74-0.289664973929961-0.725694037119043	chr13	46726689	46728279	+	0	NA	intron (NM_026056, intron 7 of 12)	intron (NM_026056, intron 7 of 12)	-37407	NM_001033192	97863	Mm.275934	NM_001033192	ENSMUSG00000069237	C78339	-	expressed sequence C78339	protein-coding
common_peak1-19204-23-41--0.67054991826968-1.0364730969458	chr9	102834595	102835518	+	0	NA	Intergenic	Intergenic	-75763	NM_033314	24059	Mm.207106	NM_033314	ENSMUSG00000032548	Slco2a1	2310021C19Rik|Pgt|Slc21a2|mPgt	solute carrier organic anion transporter family, member 2a1	protein-coding
common_peak2-30672-29-27-0.304935158557507-0.525808162491371	chr7	102440970	102442302	+	0	NA	Intergenic	Lx4A|LINE|L1	-917511	NM_011858	23966	Mm.254610	NM_011858	ENSMUSG00000048078	Tenm4	Doc4|ELM2|Odz4|R75022|Ten-m4|l(7)-3Rn|l7Rn3|mKIAA1302	teneurin transmembrane protein 4	protein-coding
unique_peak2-33699-6-9--0.75652998450706-1.11707584880836	chr11	106273170	106273634	+	0	NA	intron (NM_023913, intron 11 of 21)	MARNA|DNA|Mariner	-29447	NM_010494	15896	Mm.394	NM_010494	ENSMUSG00000001029	Icam2	CD102|Icam-2|Ly-60	intercellular adhesion molecule 2	protein-coding
unique_peak2-38273-11-9-0.186765489364251-0.344532117358383	chr6	129235754	129236219	+	0	NA	Intergenic	Intergenic	-10599	NM_001033122	12515	Mm.74745	NM_001033122	ENSMUSG00000030156	Cd69	5830438K24Rik|AI452015|AIM|VEA	CD69 antigen	protein-coding
unique_peak1-6449-7-0-2.79909083029819-2.40823996531185	chr7	99404892	99405357	+	0	NA	intron (NM_001243047, intron 1 of 10)	intron (NM_001243047, intron 1 of 10)	21644	NM_001243047	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
common_peak2-21327-11-5-0.923731083530457-1.477227296591	chr11	75565914	75566250	+	0	NA	intron (NM_009536, intron 2 of 5)	intron (NM_009536, intron 2 of 5)	19693	NM_009536	22627	Mm.234700	NM_009536	ENSMUSG00000020849	Ywhae	AU019196	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide	protein-coding
common_peak1-15271-21-24--0.0743669245084888-0.301029995663979	chr4	32656587	32657686	+	0	NA	intron (NR_026843, intron 1 of 4)	intron (NR_026843, intron 1 of 4)	1501	NR_026843	414068	Mm.389550	NR_026843	ENSMUSG00000086150	Bach2os	-	BTB and CNC homology 2, opposite strand	ncRNA
common_peak2-26274-10-16--0.73104749624157-0.604422558181019	chr2	30717606	30718317	+	0	NA	intron (NM_009116, intron 1 of 3)	ID_B1|SINE|B4	17074	NM_009116	20204	Mm.1802	NM_009116	ENSMUSG00000039476	Prrx2	Prx2|S8	paired related homeobox 2	protein-coding
unique_peak2-33015-10-9-0.0344872501214071-1.05503135781948	chr10	67003645	67004275	+	0	NA	3' UTR (NM_010118, exon 2 of 2)	3' UTR (NM_010118, exon 2 of 2)	3343	NM_010118	13654	Mm.290421	NM_010118	ENSMUSG00000037868	Egr2	Egr-2|Krox-20|Krox20|NGF1-B|Zfp-25|Zfp-6	early growth response 2	protein-coding
common_peak1-8166-18-27--0.494435770829252-0.528262014464654	chr1	195091752	195092505	+	0	NA	Intergenic	BGLII_B|LTR|ERVK	-1889	NM_008288	15483	Mm.28328	NM_008288	ENSMUSG00000016194	Hsd11b1	-	hydroxysteroid 11-beta dehydrogenase 1	protein-coding
common_peak1-16154-18-14-0.406028555619833-0.532159081577619	chr5	76588584	76589343	+	0	NA	Intergenic	Intergenic	19665	NM_020611	57357	Mm.289446	NM_020611	ENSMUSG00000029233	Srd5a3	1110025P14Rik|A430076C09|AV364670|AW987574|D730040M03Rik|H5ar|S5AR 3|Srd5a2l	steroid 5 alpha-reductase 3	protein-coding
unique_peak1-303-7-3-0.799090830298189-1.23214870625617	chr1	127272884	127273405	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	59160	NM_023735	74117	Mm.183102	NM_023735	ENSMUSG00000026341	Actr3	1200003A09Rik|Arp3	ARP3 actin-related protein 3	protein-coding
common_peak2-24595-26-26-0.173011589994994-0.363124929330838	chr17	31994350	31995264	+	0	NA	Intergenic	RMER10A|LTR|ERVL	-2070	NM_010831	17691	Mm.290941	NM_010831	ENSMUSG00000024042	Sik1	Msk|Sik|Snf1lk	salt inducible kinase 1	protein-coding
common_peak1-12065-30-20-0.777357986713112-1.30767018140166	chr17	23790107	23790961	+	0	NA	Intergenic	B3|SINE|B2	-6956	NM_153784	212733	Mm.59997	NM_153784	ENSMUSG00000043782	Ccdc64b	BICDR-2	coiled-coil domain containing 64B	protein-coding
common_peak2-28244-13-16--0.30899081061257-0.330004445983672	chr4	123749488	123750245	+	0	NA	Intergenic	ORR1A2|LTR|MaLR	155190	NM_017475	54170	Mm.220922	NM_017475	ENSMUSG00000028646	Rragc	AU041672|Gtr2|RAGC|TIB929|YGR163W	Ras-related GTP binding C	protein-coding
unique_peak1-452-9-1-2.18961340640422-2.31132995230379	chr1	167000775	167001164	+	0	NA	intron (NR_040480, intron 1 of 4)	RLTR25A|LTR|ERVK	21092	NR_040480	75857	Mm.109021	NR_040480		4930568G15Rik	-	RIKEN cDNA 4930568G15 gene	ncRNA
common_peak2-26907-12-6-0.841421063030034-1.58711810488664	chr2	160076413	160076774	+	0	NA	Intergenic	MTEa|LTR|MaLR	76637	NM_001033411	329554	Mm.291144	NM_001033411		Gm826	-	predicted gene 826	protein-coding
common_peak2-28318-3-6--1.22133801201688-1.08602067057793	chr4	133613967	133614423	+	0	NA	Intergenic	Intergenic	-10172	NM_001162970	230806	Mm.240080	NM_001162970	ENSMUSG00000012123	Aim1l	-	absent in melanoma 1-like	protein-coding
common_peak1-9885-17-13-0.410941416147434-0.546772548767014	chr12	85110809	85111556	+	0	NA	intron (NM_130887, intron 2 of 26)	intron (NM_130887, intron 2 of 26)	6598	NM_130887	170721	Mm.133443	NM_130887	ENSMUSG00000021223	Papln	E030033C16Rik	papilin, proteoglycan-like sulfated glycoprotein	protein-coding
common_peak2-23392-8-7-0.00522241794757061-1.00793137938329	chr15	58517745	58518106	+	0	NA	Intergenic	Intergenic	137057	NM_175212	74868	Mm.293754	NM_175212	ENSMUSG00000062373	Tmem65	2610029O13Rik|4930438D12Rik	transmembrane protein 65	protein-coding
unique_peak2-34763-14-26--0.855671341805824-0.949797625454538	chr15	58140849	58142054	+	0	NA	Intergenic	(TC)n|Simple_repeat|Simple_repeat	14273	NM_177755	268807	Mm.124498	NM_177755	ENSMUSG00000022357	Klhl38	8230402K04Rik	kelch-like 38	protein-coding
common_peak2-27642-15-8-0.842239749113344-0.891319708951327	chr3	107734249	107734907	+	0	NA	promoter-TSS (NM_026672)	promoter-TSS (NM_026672)	85	NM_026672	68312	Mm.458189	NM_026672	ENSMUSG00000004035	Gstm7	0610005A07Rik|AI894236|Cd203c	glutathione S-transferase, mu 7	protein-coding
common_peak1-15447-12-5-1.06381348436648-1.78669045979184	chr4	97466366	97466796	+	0	NA	intron (NM_010905, intron 2 of 10)	intron (NM_010905, intron 2 of 10)	22264	NM_010905	18027	Mm.31274	NM_010905	ENSMUSG00000028565	Nfia	1110047K16Rik|9430022M17Rik|CTF|NF1-A|NF1A	nuclear factor I/A	protein-coding
common_peak2-25453-18-8-1.14299414978604-1.45476480588849	chr19	4163407	4163866	+	0	NA	promoter-TSS (NM_021485)	promoter-TSS (NM_021485)	-391	NM_021485	58988	Mm.271937	NM_021485	ENSMUSG00000024830	Rps6kb2	70kDa|S6K2	ribosomal protein S6 kinase, polypeptide 2	protein-coding
common_peak1-19323-8-8--0.164702583494742-1.00793137938329	chr9	123851522	123851964	+	0	NA	Intergenic	Intergenic	14883	NM_009878	12581	Mm.29020	NM_009878	ENSMUSG00000096472	Cdkn2d	INK4d|p19|p19INK4d	cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)	protein-coding
unique_peak2-35107-5-11--1.28934283672701-1.477227296591	chr16	22857063	22857591	+	0	NA	promoter-TSS (NM_001190804)	promoter-TSS (NM_001190804)	315	NM_001081368	70573	Mm.68291	NM_001081368	ENSMUSG00000004462	Tbccd1	5730478M09Rik|AU015083|BB165076	TBCC domain containing 1	protein-coding
common_peak2-21823-14-10-0.439784541720347-0.519648556297791	chr11	119976267	119976713	+	0	NA	intron (NM_024249, intron 11 of 16)	intron (NM_024249, intron 11 of 16)	16242	NM_001110242	208501	Mm.46699	NM_001110242		1810043H04Rik	-	RIKEN cDNA 1810043H04 gene	protein-coding
unique_peak2-39016-2-6--1.72480917832092-1.26211192963361	chr8	56404232	56404656	+	0	NA	Intergenic	Intergenic	364363	NM_001253756	234267	Mm.241700	NM_153581	ENSMUSG00000031517	Gpm6a	Gpm6|M6A	glycoprotein m6a	protein-coding
common_peak2-27162-10-8-0.186490343566457-1.078512453669	chr3	30976483	30976942	+	0	NA	Intergenic	Intergenic	-17268	NM_011386	20482	Mm.15406	NM_011386	ENSMUSG00000027660	Skil	Skir|SnoN|sno	SKI-like	protein-coding
common_peak1-13983-61-91--0.140812626307673-0.380928408457974	chr2	102400208	102401282	+	0	NA	intron (NM_173749, intron 1 of 10)	intron (NM_173749, intron 1 of 10)	10567	NM_173749	210622	Mm.28649	NM_173749	ENSMUSG00000027188	Pamr1	5930437L24|E430002G05Rik|Ramp	peptidase domain containing associated with muscle regeneration 1	protein-coding
common_peak2-26460-46-46-0.343407091571164-0.703723098351394	chr2	74825810	74826544	+	0	NA	Intergenic	Intergenic	162308	NM_016804	53375	Mm.292613	NM_016804		Mtx2	1500012G02Rik	metaxin 2	protein-coding
unique_peak2-33027-6-9--0.75652998450706-1.11707584880836	chr10	69503256	69503912	+	0	NA	Intergenic	Intergenic	-56285	NM_001111121	76551	Mm.281741	NM_001111121	ENSMUSG00000048701	Ccdc6	2810012H18Rik|AA536681|AA960498|AW061011	coiled-coil domain containing 6	protein-coding
common_peak2-23522-15-16--0.075298090694683-0.301029995663976	chr15	76973955	76974532	+	0	NA	intron (NM_001110827, intron 2 of 13)	intron (NM_001110827, intron 2 of 13)	9999	NM_001110830	93686	Mm.202774	NM_053104	ENSMUSG00000033565	Rbfox2	Fbm2|Fxh|Hrnbp2|Rbm9	RNA binding protein, fox-1 homolog (C. elegans) 2	protein-coding
unique_peak2-34404-7-9--0.522837264589173-1.05908390183068	chr14	7952035	7952419	+	0	NA	intron (NM_001270812, intron 2 of 5).3	intron (NM_001270812, intron 2 of 5).3	-14256	NM_001024712	100042149	Mm.396155	NM_001024712	ENSMUSG00000092167	Gm3696	544988|ENSMUSG00000056940|Gm10014	predicted gene 3696	protein-coding
common_peak1-13023-16-8-0.948338640825749-1.02063122982878	chr19	5432182	5432900	+	0	NA	Intergenic	Intergenic	7397	NM_001256515	107242	Mm.329658	NM_134149	ENSMUSG00000047423	AI837181	Bles03|N28173	expressed sequence AI837181	protein-coding
unique_peak1-4143-10-3-1.35641534500877-1.75805390616669	chr2	92790449	92790972	+	0	NA	intron (NM_030725, intron 4 of 5)	B3A|SINE|B2	35452	NM_030725	80976	Mm.33490	NM_030725	ENSMUSG00000027220	Syt13	5730409J20Rik|AI549909|mKIAA1427	synaptotagmin XIII	protein-coding
unique_peak2-36080-7-7--0.200909169701811-0.97990265578305	chr19	55712513	55712939	+	0	NA	Intergenic	Intergenic	63968	NR_045318	77594	Mm.329924	NR_045318	ENSMUSG00000097632	4930552P12Rik	-	RIKEN cDNA 4930552P12 gene	ncRNA
common_peak2-29812-11-14--0.398197011356905-0.379391706698377	chr6	91207052	91207647	+	0	NA	intron (NM_001081437, intron 7 of 16)	intron (NM_001081437, intron 7 of 16)	44591	NM_007992	14115	Mm.249146	NM_007992	ENSMUSG00000064080	Fbln2	5730577E14Rik|FIBL-2	fibulin 2	protein-coding
unique_peak2-37558-4-8--1.19338551529556-1.21878474469819	chr5	32120866	32121250	+	0	NA	intron (NM_181281, intron 3 of 10)	intron (NM_181281, intron 3 of 10)	120635	NM_181282	107976	Mm.482126	NM_144541	ENSMUSG00000052139	Bre	6030405P19Rik|AI429776|B830038C02Rik	brain and reproductive organ-expressed protein	protein-coding
common_peak1-17248-28-10-1.59352750118417-3.11713623526325	chr6	129229988	129231178	+	0	NA	Intergenic	MTD|LTR|MaLR	-5196	NM_001033122	12515	Mm.74745	NM_001033122	ENSMUSG00000030156	Cd69	5830438K24Rik|AI452015|AIM|VEA	CD69 antigen	protein-coding
common_peak1-18577-39-60--0.314976090643733-0.542494191925768	chr8	105900237	105901129	+	0	NA	Intergenic	Intergenic	-29249	NR_036588	69794	Mm.396139	NR_036588		1600027J07Rik	-	RIKEN cDNA 1600027J07 gene	ncRNA
unique_peak2-34420-0-7--3.84013093047421-1.80617997398389	chr14	18237903	18238178	+	0	NA	Intergenic	Intergenic	-255434	NM_001113417	21834	Mm.32563	NM_009380	ENSMUSG00000021779	Thrb	Nr1a2|T3R[b]|T3Rbeta|Thrb1|Thrb2|c-erbAbeta	thyroid hormone receptor beta	protein-coding
common_peak1-14014-30-35--0.000249591950439054-0.304088508634279	chr2	109917447	109918404	+	0	NA	Intergenic	Intergenic	-27289	NR_040508	75517	Mm.363927	NR_040508	ENSMUSG00000086186	Ccdc34os	1700024P03Rik	coiled-coil domain containing 34, opposite strand	ncRNA
common_peak1-14373-12-9-0.326847890200276-0.459837087125828	chr2	167924774	167925535	+	0	NA	3' UTR (NM_021409, exon 3 of 3)	3' UTR (NM_021409, exon 3 of 3)	18650	NM_021409	58220	Mm.292834	NM_021409	ENSMUSG00000044641	Pard6b	AV025615|Par6b	par-6 family cell polarity regulator beta	protein-coding
unique_peak1-5775-11-5-0.923731083530457-1.477227296591	chr6	54166790	54167276	+	0	NA	intron (NM_001163640, intron 4 of 12)	intron (NM_001163640, intron 4 of 12)	-55783	NM_023543	69993	Mm.321147	NM_023543	ENSMUSG00000004633	Chn2	1700026N20Rik|4930557O16Rik|ARHGAP3|Bch	chimerin 2	protein-coding
common_peak2-28425-13-12-0.0780323124966764-0.334470287753051	chr4	148039138	148039720	+	0	NA	intron (NM_001085505, intron 6 of 10)	B1_Mus2|SINE|Alu	22003	NM_001085505	230909	Mm.332067	NM_001085505	ENSMUSG00000070577	Gm572	b2b1167Clo	predicted gene 572	protein-coding
unique_peak2-34151-4-6--0.830815435910851-0.989110657569874	chr13	24564183	24564460	+	0	NA	3' UTR (NM_001111110, exon 17 of 17)	3' UTR (NM_001111110, exon 17 of 17)	57330	NM_001284520	12763	Mm.8396	NM_007717	ENSMUSG00000016756	Cmah	-	cytidine monophospho-N-acetylneuraminic acid hydroxylase	protein-coding
unique_peak1-794-17-8-1.04837133676273-1.30305656033811	chr11	97435380	97436036	+	0	NA	intron (NM_018873, intron 1 of 19)	intron (NM_018873, intron 1 of 19)	732	NM_018873	56013	Mm.342665	NM_018873	ENSMUSG00000038453	Srcin1	P140|SNIP|mKIAA1684|p140Cap	SRC kinase signaling inhibitor 1	protein-coding
common_peak1-16368-41-19-1.3792206099613-3.7633092158656	chr5	122525863	122527498	+	0	NA	Intergenic	Intergenic	-24309	NM_010861	17906	Mm.1529	NM_010861	ENSMUSG00000013936	Myl2	MLC-2|MLC-2v|Mlc2v|Mylpc	myosin, light polypeptide 2, regulatory, cardiac, slow	protein-coding
common_peak1-13198-32-16-1.19162917796932-2.45517123152778	chr19	21603104	21604311	+	0	NA	Intergenic	Intergenic	-56556	NM_010266	14544	Mm.45054	NM_010266	ENSMUSG00000058624	Gda	AU015411|AW047581	guanine deaminase	protein-coding
common_peak2-21904-36-74--0.749497604328126-1.85122145394931	chr12	8674145	8675212	+	0	NA	Intergenic	Intergenic	-6262	NM_001160221	80913	Mm.341243	NM_030723	ENSMUSG00000020594	Pum2	5730503J23Rik|Pumm2|mKIAA0235	pumilio RNA-binding family member 2	protein-coding
common_peak1-16745-52-49-0.464403800490975-1.04068780415874	chr6	31370273	31371895	+	0	NA	intron (NM_013791, intron 2 of 17)	intron (NM_013791, intron 2 of 17)	22256	NM_013791	27418	Mm.238038	NM_013791		Mkln1	A130067F06Rik|AU015903|BB154892	muskelin 1, intracellular mediator containing kelch motifs	protein-coding
common_peak2-25672-14-17--0.270708841084668-0.328191099940267	chr19	10818103	10818661	+	0	NA	intron (NR_027805, intron 1 of 3)	intron (NR_027805, intron 1 of 3)	2945	NR_027805	403202	Mm.34482	NM_207529	ENSMUSG00000067577	A430093F15Rik	Gm674	RIKEN cDNA A430093F15 gene	ncRNA
unique_peak2-36049-7-6--0.00826409175941478-0.97990265578305	chr19	46511153	46511567	+	0	NA	intron (NM_001025391, intron 3 of 11)	RLTR11A2|LTR|ERVK	39974	NM_015752	24069	Mm.41210	NM_015752	ENSMUSG00000025231	Sufu	Su(fu)	suppressor of fused homolog (Drosophila)	protein-coding
common_peak2-27190-10-16--0.73104749624157-0.604422558181019	chr3	37204140	37204704	+	0	NA	Intergenic	Intergenic	6946	NM_145825	207175	Mm.344708	NM_145825	ENSMUSG00000045031	Cetn4	-	centrin 4	protein-coding
unique_peak2-33645-5-8--0.874305337448166-1.10484139239135	chr11	98937930	98938353	+	0	NA	intron (NM_172564, intron 4 of 12)	intron (NM_172564, intron 4 of 12)	12479	NM_172564	217169	Mm.262067	NM_172564	ENSMUSG00000017607	Tns4	9930017A07Rik|AA589547|AU016405|Cten	tensin 4	protein-coding
unique_peak2-34935-7-8--0.370834171144123-1.00793137938329	chr15	86096270	86096659	+	0	NA	intron (NM_145476, intron 4 of 12)	intron (NM_145476, intron 4 of 12)	51575	NM_145476	223754	Mm.28904	NM_145476	ENSMUSG00000051864	Tbc1d22a	BC023106|D15Ertd781e	TBC1 domain family, member 22a	protein-coding
common_peak2-24589-14-22--0.624345795699369-0.590343908676233	chr17	31874075	31874872	+	0	NA	Intergenic	MamRep4096|DNA|hAT?	59597	NM_001278570	12954	Mm.1228	NM_013501	ENSMUSG00000024041	Cryaa	Acry-1|Crya-1|Crya1|DAcry-1|lop18	crystallin, alpha A	protein-coding
common_peak1-15383-22-48--0.967425739027804-1.90173050117047	chr4	63544586	63545387	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-22668	NM_009403	21949	Mm.4664	NM_009403		Tnfsf8	CD153|CD30LG|Cd30l	tumor necrosis factor (ligand) superfamily, member 8	protein-coding
unique_peak1-6140-12-4-1.32684789020028-2.04196296489515	chr6	135025489	135026029	+	0	NA	intron (NM_181444, intron 1 of 3)	GC_rich|Low_complexity|Low_complexity	10079	NM_181444	232431	Mm.23575	NM_181444	ENSMUSG00000046733	Gprc5a	Rai3|Raig1	G protein-coupled receptor, family C, group 5, member A	protein-coding
common_peak1-8329-8-14--0.901668177660948-0.660903317613906	chr10	43943317	43943830	+	0	NA	Intergenic	L1Md_F2|LINE|L1	8342	NR_027506	70365	Mm.87073	NR_001582		Speer5-ps1	1700007C10Rik|SPEER-5|Speer5-ps	spermatogenesis associated glutamate (E)-rich protein 5, pseudogene 1	pseudo
common_peak1-16145-20-33--0.599388056659146-0.781990829058356	chr5	74092961	74093846	+	0	NA	Intergenic	Intergenic	50784	NM_178387	73472	Mm.87067	NM_178387	ENSMUSG00000029155	Spata18	1700067I02Rik	spermatogenesis associated 18	protein-coding
common_peak2-25344-20-7-1.48807478459119-2.07034318903805	chr18	78073069	78073524	+	0	NA	intron (NM_013831, intron 1 of 14)	Lx3C|LINE|L1	40007	NM_013831	19201	Mm.57174	NM_013831		Pstpip2	MAYP|cmo	proline-serine-threonine phosphatase-interacting protein 2	protein-coding
unique_peak1-2363-12-1-2.64877598508764-3.36932189928148	chr15	87652514	87653181	+	0	NA	Intergenic	Intergenic	-26474	NR_105817	102465209		NR_105817	miRBase:MI0021927	Mir6393	mmu-mir-6393	microRNA mir-6393	ncRNA
unique_peak1-2715-11-5-0.923731083530457-1.477227296591	chr16	92173168	92173669	+	0	NA	Intergenic	Intergenic	114837	NM_080456	121022	Mm.217354	NM_080456	ENSMUSG00000039680	Mrps6	AW046321	mitochondrial ribosomal protein S6	protein-coding
unique_peak2-36020-8-14--0.901668177660948-0.660903317613906	chr19	41856635	41857242	+	0	NA	intron (NM_027667, intron 6 of 11)	intron (NM_027667, intron 6 of 11)	19636	NM_001163495	71085	Mm.21646	NM_027667	ENSMUSG00000025154	Arhgap19	4933411B03Rik|AI120128|AW546831|mFLJ00368	Rho GTPase activating protein 19	protein-coding
common_peak1-10719-15-12-0.311725032414564-0.425539671739611	chr14	61723411	61724177	+	0	NA	Intergenic	B4|SINE|B4	-33500	NM_172809	50720	Mm.440703	NM_015788	ENSMUSG00000048279	Sacs	A230052M14|DNAJC29|E130115J16Rik|mKIAA0730	sacsin	protein-coding
common_peak2-23815-9-10--0.269818212233077-1.05503135781948	chr15	101183065	101183534	+	0	NA	intron (NM_028770, intron 4 of 8)	intron (NM_028770, intron 4 of 8)	-16484	NR_035462	100316694		NR_035462	miRBase:MI0009930	Mir1941	mmu-mir-1941	microRNA 1941	ncRNA
unique_peak1-1440-10-0-3.35641534500877-3.31132995230379	chr12	100279468	100280015	+	0	NA	Intergenic	MIR|SINE|MIR	120919	NM_198311	76260	Mm.282660	NM_029553	ENSMUSG00000021013	Ttc8	0610012F22Rik|AV001447|BBS8	tetratricopeptide repeat domain 8	protein-coding
common_peak2-21585-14-17--0.270708841084668-0.328191099940267	chr11	98192916	98193533	+	0	NA	Intergenic	Intergenic	-2265	NM_010895	18013	Mm.4814	NM_010895	ENSMUSG00000038255	Neurod2	Ndrf|bHLHa1	neurogenic differentiation 2	protein-coding
unique_peak1-5139-14-2-2.31425365963649-3.28500101358144	chr5	13393596	13394237	+	0	NA	Intergenic	Intergenic	-2868	NM_001243072	20346	Mm.372039	NM_009152	ENSMUSG00000028883	Sema3a	Hsema-I|SEMA1|SemD|Semad|coll-1	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A	protein-coding
common_peak1-8035-8-17--1.16470258349474-1.02063122982878	chr1	171221920	171222401	+	0	NA	Intergenic	Intergenic	239435	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
unique_peak1-2814-8-5-0.420259917226415-1.10484139239135	chr17	26113286	26113805	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-11095	NM_015830	50817	Mm.216072	NM_015830	ENSMUSG00000037326	Capn15	Solh	calpain 15	protein-coding
unique_peak1-5956-11-6-0.701338662194009-1.32595962126035	chr6	92183610	92184101	+	0	NA	Intergenic	L1Md_F2|LINE|L1	10789	NM_009426	22044	Mm.1363	NM_009426	ENSMUSG00000005892	Trh	Pro-TRH|Trf	thyrotropin releasing hormone	protein-coding
common_peak2-21833-15-15-0.0121647505556561-0.30803596071496	chr11	120521218	120521790	+	0	NA	exon (NM_175263, exon 2 of 12)	exon (NM_175263, exon 2 of 12)	647	NM_175263	77583	Mm.32839	NM_175263	ENSMUSG00000042988	Notum	5730593N15Rik	notum pectinacetylesterase homolog (Drosophila)	protein-coding
unique_peak2-36442-10-11--0.228547155712387-0.31137425193576	chr2	132945078	132945728	+	0	NA	Intergenic	Intergenic	-173631	NM_198029	241639	Mm.209784	NM_198029	ENSMUSG00000027356	Fermt1	5830467P10Rik|Kindlin-1	fermitin family homolog 1 (Drosophila)	protein-coding
common_peak1-14512-18-19--0.00900894365901106-0.306598483909153	chr3	22075532	22076431	+	0	NA	intron (NM_030732, intron 2 of 15)	intron (NM_030732, intron 2 of 15)	-74311	NR_004439	19784		NR_004439		Rprl2	RPRH3|Rmrp3	ribonuclease P RNA-like 2	ncRNA
common_peak2-23943-25-40--0.495702099272978-0.683454027796267	chr16	13671855	13672709	+	0	NA	intron (NM_001177552, intron 1 of 5)	CpG	169	NM_025653	66598	Mm.223689	NM_025653	ENSMUSG00000079737	3110001I22Rik	-	RIKEN cDNA 3110001I22 gene	protein-coding
unique_peak2-39744-15-20--0.380152672223105-0.397739447719386	chr9	124281845	124282846	+	0	NA	Intergenic	Intergenic	246063	NM_009917	12774	Mm.14302	NM_009917	ENSMUSG00000079227	Ccr5	AM4-7|CD195|Cmkbr5	chemokine (C-C motif) receptor 5	protein-coding
unique_peak1-3797-18-8-1.14299414978604-1.45476480588849	chr19	57452848	57453582	+	0	NA	exon (NM_145505, exon 6 of 17)	exon (NM_145505, exon 6 of 17)	17716	NM_145505	226252	Mm.358870	NM_145505	ENSMUSG00000033478	Fam160b1	AI450540|mKIAA1600	family with sequence similarity 160, member B1	protein-coding
unique_peak1-479-18-6-1.50556422917075-2.02801025126771	chr1	177478431	177479412	+	0	NA	Intergenic	Intergenic	-56245	NM_001199003	24012	Mm.7956	NM_011880		Rgs7	-	regulator of G protein signaling 7	protein-coding
unique_peak1-565-11-6-0.701338662194009-1.32595962126035	chr1	194671828	194672376	+	0	NA	3' UTR (NM_198247, exon 4 of 4)	3' UTR (NM_198247, exon 4 of 4)	4203	NR_040468	73455	Mm.414869	NR_040468		1700065J18Rik	-	RIKEN cDNA 1700065J18 gene	ncRNA
common_peak1-13099-60-71-0.184366860178219-0.472909071679608	chr19	7493583	7495398	+	0	NA	intron (NM_175381, intron 1 of 4)	intron (NM_175381, intron 1 of 4)	2375	NM_175381	108899	Mm.386838	NM_175381	ENSMUSG00000053080	2700081O15Rik	AI255177|AI848741|AW742297	RIKEN cDNA 2700081O15 gene	protein-coding
common_peak2-24803-21-41--0.822828157512525-1.27781945862486	chr17	66519075	66519910	+	0	NA	Intergenic	L1_Mus3|LINE|L1	46632	NM_001003919	320209	Mm.259605	NM_001003919	ENSMUSG00000035842	Ddx11	4732462I11Rik|CHL1|CHLR1|KRG2|essa15a	DEAD/H (Asp-Glu-Ala-Asp/His) box helicase 11	protein-coding
common_peak1-10084-40-55--0.148379239306506-0.333814721158525	chr13	23584556	23586027	+	0	NA	Intergenic	B1_Mur4|SINE|Alu	-4565	NM_001289614	238555	Mm.129668	NM_175938		Btn2a2	Btn2|D030063K05	butyrophilin, subfamily 2, member A2	protein-coding
common_peak2-24371-12-19--0.673152109799724-0.546772548767014	chr17	7945524	7945996	+	0	NA	intron (NM_001081416, intron 14 of 19)	intron (NM_001081416, intron 14 of 19)	52079	NM_001081416	68655	Mm.379161	NM_001081416	ENSMUSG00000071984	Fndc1	1110027O12Rik|1110051A18Rik|mKIAA1866	fibronectin type III domain containing 1	protein-coding
common_peak2-32174-9-9--0.132314688483142-1.03275496310833	chr9	111271074	111271584	+	0	NA	intron (NM_001164659, intron 11 of 21)	intron (NM_001164659, intron 11 of 21)	57086	NM_001164659	320429	Mm.270754	NM_001164659	ENSMUSG00000062296	Trank1	A230061D21Rik|C030048J01Rik|Gm187|Lba1	tetratricopeptide repeat and ankyrin repeat containing 1	protein-coding
common_peak1-17551-8-21--1.45420920068973-1.61268301619756	chr7	29983279	29983857	+	0	NA	intron (NM_001164658, intron 9 of 27)	intron (NM_001164658, intron 9 of 27)	15484	NM_001164658	320225	Mm.349382	NM_001039721	ENSMUSG00000049676	Catsperg1	A230107C01Rik|Catsperg	catsper channel auxiliary subunit gamma 1	protein-coding
common_peak1-18534-37-36-0.316539705856869-0.566504029620424	chr8	94385566	94386840	+	0	NA	Intergenic	Intergenic	-60650	NM_008393	16373	Mm.238044	NM_008393	ENSMUSG00000031734	Irx3	AI894186	Iroquois related homeobox 3	protein-coding
unique_peak2-37525-0-4--3.16205902536157-1.10720996964787	chr5	23706999	23707285	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	36361	NM_153092	231042	Mm.45513	NM_153092	ENSMUSG00000048439	Nupl2	AV116043|CG1|NLP-1|Nlp1	nucleoporin like 2	protein-coding
common_peak1-15305-25-9-1.53992181045774-2.70611768348013	chr4	43630986	43631871	+	0	NA	Intergenic	Lx|LINE|L1	-13379	NM_173788	230103	Mm.103477	NM_173788	ENSMUSG00000028469	Npr2	GC-B|GC-B2|GC-B3|cn|mNPR-B|pwe	natriuretic peptide receptor 2	protein-coding
common_peak1-11286-11-11--0.0762689164695427-0.301029995663976	chr15	83223237	83223784	+	0	NA	intron (NM_001159509, intron 2 of 10)	(CCTA)n|Simple_repeat|Simple_repeat	-25783	NR_027980	69291	Mm.66794	NM_001033147		1700001L05Rik	-	RIKEN cDNA 1700001L05 gene	ncRNA
common_peak1-13192-58-30-1.34175362450362-5.25998910104472	chr19	20529820	20531721	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-36435	NR_015502	320092	Mm.482524	NR_015502		E030003E18Rik	1700127G21Rik	RIKEN cDNA E030003E18 gene	ncRNA
common_peak1-14731-12-31--1.35122401491236-1.94790812833823	chr3	84814763	84815371	+	0	NA	Intergenic	Intergenic	-45565	NM_001040461	654362	Mm.466598	NM_001040461		Dear1	Dear|Despr	dual endothelin 1/angiotensin II receptor 1	protein-coding
unique_peak1-5327-12-7-0.648775985087639-0.697979855752659	chr5	81275340	81275859	+	0	NA	Intergenic	L1Md_A|LINE|L1	-175019	NM_198702	319387	Mm.273631	NM_198702	ENSMUSG00000037605	Lphn3	5430402I23Rik|CIRL-3|D130075K09Rik|Gm1379|LEC3|mKIAA0768	latrophilin 3	protein-coding
common_peak2-23530-11-9-0.186765489364251-0.344532117358383	chr15	77823059	77823623	+	0	NA	TTS (NM_007583)	TTS (NM_007583)	-22087	NM_018749	55944	Mm.3955	NM_018749	ENSMUSG00000016554	Eif3d	66/67kDa|AA407891|Eif3s7|eIF3p66	eukaryotic translation initiation factor 3, subunit D	protein-coding
unique_peak1-3523-14-5-1.31425365963649-1.4372489031793	chr19	18889052	18889676	+	0	NA	intron (NM_153417, intron 16 of 38)	(TTTTTG)n|Simple_repeat|Simple_repeat	64891	NM_153417	225997	Mm.215171	NM_153417	ENSMUSG00000024727	Trpm6	CHAK2|TRPM6/CHAK2	transient receptor potential cation channel, subfamily M, member 6	protein-coding
common_peak1-14492-12-23--0.936186515633517-0.912223620338476	chr3	10088017	10088390	+	0	NA	promoter-TSS (NR_045710)	promoter-TSS (NR_045710)	-74	NR_045710	100041480	Mm.455632	NR_045710	ENSMUSG00000049230	Gm9833	ENSMUSG00000049230	myelin basic protein expression factor 2, repressor pseudogene	pseudo
common_peak2-26586-11-15--0.491306415748387-0.435191258261915	chr2	109403769	109404288	+	0	NA	Intergenic	Intergenic	-110829	NM_007540	12064	Mm.1442	NM_007540	ENSMUSG00000048482	Bdnf	-	brain derived neurotrophic factor	protein-coding
common_peak1-11268-74-118--0.178931186329336-0.465687833458293	chr15	81521646	81524010	+	0	NA	intron (NM_001164320, intron 4 of 5)	intron (NM_001164320, intron 4 of 5)	4889	NM_001164320	214685	Mm.393287	NM_001164320	ENSMUSG00000063765	Chadl	AY100452|D930017K21Rik	chondroadherin-like	protein-coding
unique_peak1-217-10-2-1.77145284428761-2.09384600808989	chr1	88133506	88134023	+	0	NA	intron (NM_030184, intron 19 of 24)	L1_Mur3|LINE|L1	-66032	NM_145222	227327	Mm.86467	NM_145222	ENSMUSG00000079445	B3gnt7	C330001H22Rik|beta-3GnT7	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7	protein-coding
common_peak1-8236-6-8--0.60452689106201-1.03789460276074	chr10	13965781	13966250	+	0	NA	Intergenic	L1Md_F2|LINE|L1	279830	NM_010437	15273	Mm.42157	NM_010437	ENSMUSG00000015501	Hivep2	MIBP1|Schnurri-2|Shn-2	human immunodeficiency virus type I enhancer binding protein 2	protein-coding
common_peak1-13886-148-178-0.433438350377863-2.42700518566538	chr2	75657657	75660230	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-11291	NM_172666	228061	Mm.31227	NM_172666	ENSMUSG00000042410	Agps	5832437L22|9930035G10Rik|AW123847|Adaps|Adas|Adhaps|Adps|Aldhpsy|bs2	alkylglycerone phosphate synthase	protein-coding
unique_peak2-39691-3-11--1.99894559068043-1.95434855131066	chr9	110653665	110653953	+	0	NA	Intergenic	Intergenic	-4160	NM_011199	19228	Mm.3542	NM_011199	ENSMUSG00000032492	Pth1r	PPR|Pthr|Pthr1	parathyroid hormone 1 receptor	protein-coding
common_peak1-16572-17-13-0.410941416147434-0.546772548767014	chr5	146700334	146701184	+	0	NA	Intergenic	MTA_Mm-int|LTR|MaLR	-9329	NM_007818	13112	Mm.332844	NM_007818	ENSMUSG00000056035	Cyp3a11	AI256190|Cyp3a|IIIAm1|Pcn	cytochrome P450, family 3, subfamily a, polypeptide 11	protein-coding
common_peak1-17357-32-37-0.0311645057760748-0.312460117298692	chr7	24460536	24462162	+	0	NA	Intergenic	Intergenic	18014	NM_030735	81010	Mm.379267	NM_030735	ENSMUSG00000035523	Vmn1r172	V1rd9|V3R9	vomeronasal 1 receptor 172	protein-coding
common_peak1-10982-67-112--0.275767479632193-0.683970344926767	chr15	34082634	34083808	+	0	NA	Intergenic	Intergenic	70747	NM_026002	67154	Mm.130883	NM_026002	ENSMUSG00000022255	Mtdh	2610103J23Rik|3D3|3D3/Lyric|AEG-1|AV353288|D8Bwg1112e|Lyric	metadherin	protein-coding
common_peak1-15338-22-27--0.160070816970199-0.317737750275047	chr4	48472785	48473670	+	0	NA	intron (NM_172304, intron 6 of 15)	intron (NM_172304, intron 6 of 15)	13067	NM_172304	269536	Mm.272025	NM_172304	ENSMUSG00000028345	Tex10	2610206N19Rik|2810462N03Rik|BC006867	testis expressed gene 10	protein-coding
unique_peak2-39973-4-5--0.608423014574403-0.909929411522249	chrX	151344491	151344922	+	0	NA	Intergenic	L1Md_F3|LINE|L1	15952	NM_020019	17142	Mm.377098	NM_020019	ENSMUSG00000063728	Magea6	Mage-a6	melanoma antigen, family A, 6	protein-coding
common_peak1-7449-28-15-1.05295911982146-1.80321929531239	chr1	72399829	72401253	+	0	NA	intron (NM_009533, intron 14 of 20)	intron (NM_009533, intron 14 of 20)	46546	NM_009533	22596	Mm.246952	NM_009533	ENSMUSG00000026187	Xrcc5	AI314015|Ku80|Ku86	X-ray repair complementing defective repair in Chinese hamster cells 5	protein-coding
common_peak2-21848-7-9--0.522837264589173-1.05908390183068	chr11	121259461	121259841	+	0	NA	Intergenic	MMERVK10C-int|LTR|ERVK	-10086	NM_139147	217371	Mm.281639	NM_139147	ENSMUSG00000025170	Rab40b	SEC4L|rar	Rab40B, member RAS oncogene family	protein-coding
common_peak2-30175-27-28-0.133564955767664-0.358978896303361	chr6	149408950	149409886	+	0	NA	intron (NM_001112796, intron 1 of 7)	MER3|DNA|MER1_type	51912	NM_009753	12121	Mm.177181	NM_009753	ENSMUSG00000003452	Bicd1	B830009D06Rik	bicaudal D homolog 1 (Drosophila)	protein-coding
common_peak1-18040-17-29--0.688594257403481-0.756750750680359	chr7	143739841	143740741	+	0	NA	Intergenic	Intergenic	161996	NR_046021	621677	Mm.207290	NR_046021		Gm6249	EG621677	predicted gene 6249	ncRNA
common_peak2-23628-7-9--0.522837264589173-1.05908390183068	chr15	83343162	83343663	+	0	NA	Intergenic	RMER21A|LTR|ERV1	-2075	NM_178869	319953	Mm.235007	NM_178869	ENSMUSG00000022442	Ttll1	6330444E16Rik|AV014541	tubulin tyrosine ligase-like 1	protein-coding
unique_peak2-34297-4-7--1.02346051385325-1.09384600808989	chr13	75840246	75840667	+	0	NA	Intergenic	RMER4A|LTR|ERVK	-4476	NM_138953	192657	Mm.21288	NM_138953	ENSMUSG00000001542	Ell2	-	elongation factor RNA polymerase II 2	protein-coding
common_peak1-18965-10-17--0.813509656433543-0.699649909729472	chr9	54733893	54734491	+	0	NA	intron (NM_022655, intron 6 of 21)	intron (NM_022655, intron 6 of 21)	22630	NM_022655	64602	Mm.208991	NM_022655	ENSMUSG00000032293	Ireb2	D9Ertd85e|Irp2	iron responsive element binding protein 2	protein-coding
common_peak1-10225-33-44--0.160515533804146-0.342407020751092	chr13	51651084	51652128	+	0	NA	intron (NM_009167, intron 1 of 11)	Lx8|LINE|L1	10847	NM_009167	20418	Mm.131870	NM_009167	ENSMUSG00000021448	Shc3	N-Shc|Rai|ShcC	src homology 2 domain-containing transforming protein C3	protein-coding
common_peak1-15439-68-68-0.461436322520127-1.2766883375124	chr4	93334621	93335913	+	0	NA	Intergenic	Lx2B|LINE|L1	-333065	NM_026954	69136	Mm.171558	NM_026954	ENSMUSG00000054000	Tusc1	2200001D17Rik|TSG-9	tumor suppressor candidate 1	protein-coding
unique_peak1-2097-8-3-1.00522241794757-1.39487600375387	chr15	37255543	37256035	+	0	NA	intron (NM_026496, intron 8 of 15)	intron (NM_026496, intron 8 of 15)	92998	NM_026496	252973	Mm.244612	NM_026496	ENSMUSG00000022286	Grhl2	0610015A08Rik|BOM|Tcfcp2l3	grainyhead-like 2 (Drosophila)	protein-coding
common_peak1-18297-34-20-0.989751104222505-2.03367508793052	chr8	45610682	45611835	+	0	NA	Intergenic	Intergenic	-424304	NM_001081286	14107	Mm.27365	NM_001081286	ENSMUSG00000070047	Fat1	2310038E12Rik|AU023433|Fath|mFat1	FAT tumor suppressor homolog 1 (Drosophila)	protein-coding
common_peak1-17881-21-23--0.0154732354549205-0.305650498375555	chr7	118276897	118277720	+	0	NA	Intergenic	Intergenic	-11119	NR_015573	75479	Mm.381620	NR_015573		1700012D14Rik	-	RIKEN cDNA 1700012D14 gene	ncRNA
common_peak2-26558-19-17-0.232762325219374-0.392630012299441	chr2	102132740	102133446	+	0	NA	Intergenic	Intergenic	-106476	NM_001290784	241576	Mm.489740	NM_178886	ENSMUSG00000048058	Ldlrad3	6430500P08|AI194318|Lrad3	low density lipoprotein receptor class A domain containing 3	protein-coding
common_peak1-13017-26-16-0.840436250908123-1.24110690293937	chr19	5106166	5107252	+	0	NA	intron (NM_029576, intron 1 of 5)	MIRc|SINE|MIR	287	NM_029576	76308	Mm.182563	NM_029576	ENSMUSG00000024870	Rab1b	1110011F09Rik	RAB1B, member RAS oncogene family	protein-coding
common_peak1-16027-14-5-1.31425365963649-1.4372489031793	chr5	36084856	36085541	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	-13273	NM_194344	231147	Mm.290429	NM_194344	ENSMUSG00000036553	Sh3tc1	4631428G15|BC024909	SH3 domain and tetratricopeptide repeats 1	protein-coding
common_peak2-22542-185-261-0.272003002422782-1.44118382563096	chr13	58127122	58129605	+	0	NA	intron (NM_001195075, intron 10 of 16)	L1M5|LINE|L1	-3802	NR_030544	100124491		NR_030544		Mir874	Mirn874|mmu-mir-874	microRNA 874	ncRNA
common_peak1-19001-25-27-0.0544949832875021-0.316543811862083	chr9	59690561	59691660	+	0	NA	intron (NM_173018, intron 16 of 43)	intron (NM_173018, intron 16 of 43)	92129	NM_173018	270163	Mm.249545	NM_173018	ENSMUSG00000039585	Myo9a	4732465J09Rik|C130068I12Rik|C230003M11	myosin IXa	protein-coding
common_peak1-17949-25-26-0.106962403181638-0.336580821310522	chr7	127875570	127876638	+	0	NA	3' UTR (NM_001164580, exon 3 of 3)	3' UTR (NM_001164580, exon 3 of 3)	-6967	NM_177697	233813	Mm.389939	NM_177697	ENSMUSG00000030889	Vwa3a	E030013G06Rik	von Willebrand factor A domain containing 3A	protein-coding
unique_peak2-36718-14-46--1.65537269131999-3.88696893869767	chr3	52102283	52103236	+	0	NA	intron (NM_019739, intron 1 of 2)	intron (NM_019739, intron 1 of 2)	30500	NM_019739	56458	Mm.29891	NM_019739	ENSMUSG00000044167	Foxo1	AI876417|Afxh|FKHR|Fkhr1|Foxo1a	forkhead box O1	protein-coding
common_peak2-21943-18-29--0.593971444380167-0.662033714151235	chr12	29964327	29965256	+	0	NA	Intergenic	Intergenic	-248458	NM_001093775	17933	Mm.253067	NM_008666	ENSMUSG00000061911	Myt1l	2900046C06Rik|2900093J19Rik|C630034G21Rik|Nztf1|Pmng1|Png-1|mKIAA1106	myelin transcription factor 1-like	protein-coding
common_peak2-31568-61-57-0.524768334621768-1.35565283421421	chr8	118349451	118351093	+	0	NA	Intergenic	Intergenic	-119478	NM_001025577	17132	Mm.275549	NM_001025577		Maf	2810401A20Rik|A230108G15Rik|AW047063|c-maf	avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog	protein-coding
common_peak2-20037-13-37--1.46945548280582-2.63673708350642	chr1	138619336	138620163	+	0	NA	intron (NR_037986, intron 2 of 4)	intron (NR_037986, intron 2 of 4)	26961	NR_037986	100503474	Mm.428276	NR_037986		Gm16880	-	predicted gene, 16880	ncRNA
unique_peak1-2019-11-1-2.50869358425161-2.83420869758413	chr15	10662114	10662717	+	0	NA	intron (NR_045063, intron 2 of 6)	intron (NR_045063, intron 2 of 6)	17760	NR_045065	75259	Mm.33928	NR_045063	ENSMUSG00000097058	4930556M19Rik	1700009D01Rik|C130022M03Rik	RIKEN cDNA 4930556M19 gene	ncRNA
common_peak1-7565-29-52--0.615630373948088-1.02702006187975	chr1	43163175	43164410	+	0	NA	intron (NM_133818, intron 2 of 3)	Lx3_Mus|LINE|L1	8237	NM_133818	98404	Mm.28817	NM_133818	ENSMUSG00000010290	AI597479	-	expressed sequence AI597479	protein-coding
unique_peak2-39956-1-7--2.62705701021674-1.80617997398389	chrX	140521257	140521586	+	0	NA	Intergenic	L1VL2|LINE|L1	-66817	NR_040271	319764	Mm.208482	NR_040271	ENSMUSG00000085139	A730046J19Rik	-	RIKEN cDNA A730046J19 gene	ncRNA
unique_peak1-2555-9-0-3.18961340640422-3.01029995663981	chr16	24095917	24096424	+	0	NA	Intergenic	Intergenic	-107472	NM_009744	12053	Mm.347398	NM_009744	ENSMUSG00000022508	Bcl6	Bcl5	B cell leukemia/lymphoma 6	protein-coding
common_peak1-12233-8-9--0.316705676939792-1.03275496310833	chr17	35120507	35121021	+	0	NA	intron (NM_001204274, intron 2 of 4)	Lx|LINE|L1	1689	NM_030597	27756	Mm.165735	NM_030597	ENSMUSG00000007050	Lsm2	D17H6S56E-2|D17H6S56E2|Dmapl|Dmpkap|G7b|Sm-X5|SmX5|snRNP	LSM2 homolog, U6 small nuclear RNA associated (S. cerevisiae)	protein-coding
common_peak1-12976-26-21-0.468467473521165-0.647723624534446	chr19	4063841	4064936	+	0	NA	Intergenic	MMVL30-int|LTR|ERV1	-5094	NM_144869	225884	Mm.440201	NM_144869	ENSMUSG00000058216	BC021614	-	cDNA sequence BC021614	protein-coding
common_peak1-13613-38-36-0.36199929366958-0.674559023890888	chr2	22894689	22895999	+	0	NA	intron (NM_001077190, intron 1 of 10)	CpG	417	NM_001077192	11308	Mm.205647	NM_007380	ENSMUSG00000058835	Abi1	E3B1|NAP1|Ssh3bp1	abl-interactor 1	protein-coding
common_peak2-30993-89-134--0.0418488422248284-0.308404965154192	chr8	4677390	4679051	+	0	NA	Intergenic	CpG	65050	NM_145591	233987	Mm.102799	NM_145591		Zfp958	-	zinc finger protein 958	protein-coding
common_peak2-23726-25-40--0.495702099272978-0.683454027796267	chr15	94628893	94629719	+	0	NA	intron (NM_178789, intron 3 of 7)	intron (NM_178789, intron 3 of 7)	169690	NM_178789	320709	Mm.74873	NM_178789	ENSMUSG00000063296	Tmem117	B930062P21Rik	transmembrane protein 117	protein-coding
common_peak2-28650-6-7--0.434601889619698-0.97990265578305	chr5	30907312	30907708	+	0	NA	intron (NM_010608, intron 1 of 1)	MIRc|SINE|MIR	-16518	NR_040427	100502829	Mm.39944	NR_040427		Gm9899	ENSMUSG00000053214	predicted gene 9899	ncRNA
common_peak1-14128-12-31--1.35122401491236-1.94790812833823	chr2	130450037	130450734	+	0	NA	intron (NM_198176, intron 2 of 2)	B1_Mus2|SINE|Alu	5378	NM_198176	380601	Mm.27090	NM_198176		Fastkd5	C78212|mKIAA1792	FAST kinase domains 5	protein-coding
unique_peak1-1039-9-5-0.604650905683064-1.21398586181642	chr11	76893285	76893800	+	0	NA	Intergenic	Intergenic	-1603	NM_001012309	237859	Mm.156195	NM_001012309	ENSMUSG00000037958	Ccdc55	8030451K07|AI851076|AL022898|NSpr70|NSrp70|Nsrp1	coiled-coil domain containing 55	protein-coding
unique_peak1-1233-8-3-1.00522241794757-1.39487600375387	chr11	113028123	113028577	+	0	NA	intron (NR_015556, intron 1 of 2)	B4A|SINE|B4	34802	NR_015556	72386	Mm.266961	NR_015556	ENSMUSG00000087259	2610035D17Rik	-	RIKEN cDNA 2610035D17 gene	ncRNA
common_peak1-15089-21-15-0.569489265266236-0.756118839439552	chr3	129583214	129584423	+	0	NA	promoter-TSS (NM_183423)	promoter-TSS (NM_183423)	-284	NM_183423	66350	Mm.151951	NM_023196	ENSMUSG00000027999	Pla2g12a	2310004B05Rik|GXII|GXII-1|GXII-1-PLA2|Pla2g12|Rossy|mGXII-1	phospholipase A2, group XIIA	protein-coding
unique_peak2-34270-7-5-0.214128329577033-1.01466476204226	chr13	67268812	67269230	+	0	NA	Intergenic	Intergenic	-5097	NM_001013769	380855	Mm.284988	NM_001013769	ENSMUSG00000058900	Rsl1	rslcan-9	regulator of sex limited protein 1	protein-coding
unique_peak2-37563-2-6--1.72480917832092-1.26211192963361	chr5	32416624	32417020	+	0	NA	Intergenic	L1MC4|LINE|L1	-22023	NM_008037	14284	Mm.24684	NM_008037	ENSMUSG00000029135	Fosl2	Fra-2	fos-like antigen 2	protein-coding
unique_peak1-5325-12-2-2.06381348436648-2.79529063155376	chr5	81038820	81039543	+	0	NA	Intergenic	Lx|LINE|L1	-411437	NM_198702	319387	Mm.273631	NM_198702	ENSMUSG00000037605	Lphn3	5430402I23Rik|CIRL-3|D130075K09Rik|Gm1379|LEC3|mKIAA0768	latrophilin 3	protein-coding
common_peak1-13188-19-23--0.18227517405947-0.320777457303847	chr19	18758533	18759235	+	0	NA	intron (NM_026120, intron 3 of 7)	intron (NM_026120, intron 3 of 7)	13614	NM_026120	67383	Mm.306602	NM_026120	ENSMUSG00000024726	2410127L17Rik	-	RIKEN cDNA 2410127L17 gene	protein-coding
common_peak2-24552-53-63-0.140973012415929-0.404803808383254	chr17	28328306	28329493	+	0	NA	intron (NM_172617, intron 3 of 14)	B2_Mm2|SINE|B2	14536	NM_172617	224656	Mm.267359	NM_172617	ENSMUSG00000024220	Zfp523	2810027J07|BC025615|Znf76	zinc finger protein 523	protein-coding
common_peak1-16827-23-25-0.0213277863679888-0.30528805757448	chr6	50110063	50110935	+	0	NA	intron (NM_001164733, intron 4 of 13)	intron (NM_001164733, intron 4 of 13)	50259	NM_001164733	56524	Mm.41288	NM_008016	ENSMUSG00000038388	Mpp6	P55t|Pals2	membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)	protein-coding
common_peak1-11950-24-27--0.0141450192898871-0.304978344874324	chr17	5439613	5440639	+	0	NA	intron (NM_027457, intron 1 of 3)	intron (NM_027457, intron 1 of 3)	134	NM_027457	70544	Mm.46654	NM_027457	ENSMUSG00000004945	Tmem242	1110008A10Rik|2310046K16Rik|5730437N04Rik	transmembrane protein 242	protein-coding
unique_peak2-38506-4-5--0.608423014574403-0.909929411522249	chr7	43662581	43662961	+	0	NA	Intergenic	Intergenic	2857133	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak1-10342-18-21--0.146512467408946-0.306326795069975	chr13	75797268	75798025	+	0	NA	Intergenic	Intergenic	15152	NR_030451	751556		NR_030451	miRBase:MI0004644	Mir682	Mirn682|mir-682|mmu-mir-682	microRNA 682	ncRNA
common_peak2-20445-20-40--0.869477220026891-1.45230360914611	chr10	37137599	37138788	+	0	NA	Intergenic	Intergenic	-279461	NM_008538	17118	Mm.30059	NM_008538	ENSMUSG00000069662	Marcks	Macs|PKCSL	myristoylated alanine rich protein kinase C substrate	protein-coding
unique_peak2-36013-4-5--0.608423014574403-0.909929411522249	chr19	40493539	40493872	+	0	NA	intron (NM_001034962, intron 1 of 22)	intron (NM_001034962, intron 1 of 22)	-16905	NM_001034964	20411	Mm.210815	NM_009166		Sorbs1	2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296	sorbin and SH3 domain containing 1	protein-coding
unique_peak1-65-8-1-2.00522241794757-2.05605744720049	chr1	36254846	36255259	+	0	NA	intron (NM_198899, intron 11 of 40)	B4A|SINE|B4	46095	NM_198899	320011	Mm.261022	NM_198899	ENSMUSG00000037470	Uggt1	0910001L17Rik|A930007H10Rik|AA589501|AI414429|AI448372|C820010P03Rik|GT|UGT1|Ugcgl1	UDP-glucose glycoprotein glucosyltransferase 1	protein-coding
common_peak1-17379-38-37-0.323525145854945-0.611014125894502	chr7	120634968	120635966	+	0	NA	Intergenic	Intergenic	-21881	NM_001285831	67420	Mm.206919	NM_026143	ENSMUSG00000030759	Far1	2600011M19Rik|2900034E22Rik|3732409C05Rik|AI850429|Mlstd2	fatty acyl CoA reductase 1	protein-coding
common_peak2-29082-74-101-0.0434612350071122-0.317896860788884	chr5	121190543	121192011	+	0	NA	exon (NM_145227, exon 5 of 11)	exon (NM_145227, exon 5 of 11)	8580	NM_145227	246728	Mm.260926	NM_145227	ENSMUSG00000032690	Oas2	Oasl11	2'-5' oligoadenylate synthetase 2	protein-coding
common_peak2-31998-14-12-0.198776442216552-0.373562084705529	chr9	70862913	70863508	+	0	NA	Intergenic	MIR|SINE|MIR	-80595	NM_008280	15450	Mm.390187	NM_008280	ENSMUSG00000032207	Lipc	AI256194|HL|Hpl	lipase, hepatic	protein-coding
unique_peak1-4259-7-0-2.79909083029819-2.40823996531185	chr2	131085169	131085679	+	0	NA	Intergenic	ID_B1|SINE|B4	-2812	NM_153501	74450	Mm.101264	NM_153501	ENSMUSG00000037514	Pank2	4933409I19Rik|AI642621	pantothenate kinase 2	protein-coding
common_peak1-11818-9-32--1.85478071295423-3.27210358356897	chr16	76142754	76143415	+	0	NA	intron (NR_040575, intron 1 of 2)	RLTR4_MM-int|LTR|ERV1	20226	NR_040575	78215	Mm.243885	NR_040575		4930578N18Rik	-	RIKEN cDNA 4930578N18 gene	ncRNA
unique_peak2-37850-5-19--2.02630843089322-2.19184853030482	chr5	135778587	135779255	+	0	NA	intron (NM_033571, intron 8 of 8)	B2_Mm2|SINE|B2	46824	NM_001277892	94244	Mm.26037	NM_033571	ENSMUSG00000040013	Fkbp6	1700008G22Rik|36kDa|AU017274|D5Ertd724e|FKBP-36|FKBP-6	FK506 binding protein 6	protein-coding
common_peak2-24644-30-37--0.0782521039517121-0.304004708442489	chr17	35134709	35135982	+	0	NA	Intergenic	RNERVK23-int|LTR|ERVK	-2507	NM_011690	22321	Mm.28420	NM_011690	ENSMUSG00000007029	Vars	Bat6|D17H6S56E|G7a|Vars2	valyl-tRNA synthetase	protein-coding
common_peak2-28062-24-19-0.471281807880354-0.677583764578261	chr4	62407915	62408825	+	0	NA	Intergenic	ORR1A2-int|LTR|MaLR	127664	NM_134257	50780	Mm.286753	NM_019492	ENSMUSG00000059810	Rgs3	4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S	regulator of G-protein signaling 3	protein-coding
common_peak1-15317-18-40--1.04463285338973-1.77675427888235	chr4	45513350	45514207	+	0	NA	intron (NM_001033306, intron 1 of 5)	intron (NM_001033306, intron 1 of 5)	29922	NM_001033306	230126	Mm.251716	NM_001033306	ENSMUSG00000044813	Shb	BC028832	src homology 2 domain-containing transforming protein B	protein-coding
common_peak2-28432-115-151-0.231179446892811-0.782727595823912	chr4	148626277	148627275	+	0	NA	intron (NM_207682, intron 14 of 46)	intron (NM_207682, intron 14 of 46)	55031	NM_207682	16561	Mm.402393	NM_008441	ENSMUSG00000063077	Kif1b	A530096N05Rik|AI448212|AI506502|D4Mil1e|KIF1Bp130|KIF1Bp204	kinesin family member 1B	protein-coding
common_peak1-10740-27-16-0.904083109644897-1.48160942223867	chr14	66104081	66105028	+	0	NA	Intergenic	B3|SINE|B2	-60245	NM_010932	18155	Mm.16347	NM_010932	ENSMUSG00000045731	Pnoc	N/OFQ|N23K|Npnc1|OFQ/N	prepronociceptin	protein-coding
common_peak2-24593-15-19--0.309763344331706-0.356936432242222	chr17	31965670	31966553	+	0	NA	Intergenic	Intergenic	26626	NM_010831	17691	Mm.290941	NM_010831	ENSMUSG00000024042	Sik1	Msk|Sik|Snf1lk	salt inducible kinase 1	protein-coding
common_peak1-16274-70-91-0.0964049603183854-0.357340306497258	chr5	108628530	108630296	+	0	NA	intron (NM_028481, intron 21 of 28)	L1MB5|LINE|L1	67480	NM_028481	73254	Mm.441231	NM_028481	ENSMUSG00000056531	Ccdc18	1700021E15Rik|4932411G06Rik|NY-SAR-41	coiled-coil domain containing 18	protein-coding
common_peak2-21549-22-19-0.325356010200042-0.479250674391597	chr11	96034339	96035390	+	0	NA	Intergenic	Intergenic	-20811	NM_008267	15408	Mm.57221	NM_008267		Hoxb13	-	homeobox B13	protein-coding
unique_peak1-254-8-1-2.00522241794757-2.05605744720049	chr1	91664784	91665299	+	0	NA	intron (NM_178119, intron 12 of 17)	intron (NM_178119, intron 12 of 17)	-84574	NR_015540	74403	Mm.444291	NR_015540		4933400F21Rik	1700091C04Rik|4930565K10Rik	RIKEN cDNA 4933400F21 gene	ncRNA
unique_peak1-4563-10-4-1.03448725012141-1.5150158574804	chr3	51915632	51916159	+	0	NA	Intergenic	Intergenic	-6967	NM_001004176	433586	Mm.234972	NM_001004176	ENSMUSG00000061143	Maml3	AV234550|BC049812|Mam-2|mKIAA1816	mastermind like 3 (Drosophila)	protein-coding
common_peak2-26263-50-53-0.286052814315484-0.610031908571722	chr2	30415029	30416701	+	0	NA	Intergenic	Intergenic	-34699	NM_030137	78617	Mm.40413	NM_030137	ENSMUSG00000047363	Cstad	9530039B02Rik	CSA-conditional, T cell activation-dependent protein	protein-coding
unique_peak1-211-11-6-0.701338662194009-1.32595962126035	chr1	86586636	86587216	+	0	NA	Intergenic	Intergenic	908459	NM_030194	109032	Mm.335802	NM_030194	ENSMUSG00000070034	Sp110	5031415C07Rik|52kDa|5830484A20Rik|ENSMUSG00000075603|Ifi75|Ipr1	Sp110 nuclear body protein	protein-coding
common_peak2-31652-16-15-0.118263642268062-0.328191099940264	chr8	126523113	126523742	+	0	NA	intron (NM_133966, intron 4 of 4)	intron (NM_133966, intron 4 of 4)	-16405	NM_019552	56199	Mm.274243	NM_019552	ENSMUSG00000031974	Abcb10	Abc-me|Abcb12	ATP-binding cassette, sub-family B (MDR/TAP), member 10	protein-coding
unique_peak2-37502-12-22--0.874785970969374-0.809260849721102	chr5	8736944	8737997	+	0	NA	intron (NM_011076, intron 23 of 27)	MLT1H|LTR|MaLR	-60677	NM_011075	18669	Mm.146649	NM_011075	ENSMUSG00000028970	Abcb1b	Abcb1|Mdr1|Mdr1b|Pgy-1|Pgy1|mdr	ATP-binding cassette, sub-family B (MDR/TAP), member 1B	protein-coding
common_peak1-18629-9-13--0.617741515653384-0.459837087125828	chr8	109961667	109962091	+	0	NA	intron (NM_025830, intron 1 of 23)	L2c|LINE|L2	1581	NM_025830	66894	Mm.390058	NM_025830	ENSMUSG00000031930	Wwp2	1300010O06Rik|AA690238|AIP2|AW554328	WW domain containing E3 ubiquitin protein ligase 2	protein-coding
unique_peak2-33313-3-6--1.22133801201688-1.08602067057793	chr11	6472317	6472659	+	0	NA	intron (NM_146014, intron 2 of 9)	intron (NM_146014, intron 2 of 9)	12302	NM_001190344	216527	Mm.221271	NM_146014	ENSMUSG00000000378	Ccm2	BC029157	cerebral cavernous malformation 2	protein-coding
common_peak1-12338-39-80--0.724088755965471-1.93463368846708	chr17	55891761	55892813	+	0	NA	intron (NM_139138, intron 1 of 16)	intron (NM_139138, intron 1 of 16)	3038	NM_139138	52614	Mm.210497	NM_139138	ENSMUSG00000032915	Emr4	D17Ertd479e|Egf-tm7|Fire|Gpr127	EGF-like module containing, mucin-like, hormone receptor-like sequence 4	protein-coding
unique_peak2-35130-6-8--0.60452689106201-1.03789460276074	chr16	30186716	30187176	+	0	NA	Intergenic	Intergenic	80672	NM_027904	71756	Mm.290614	NM_027904	ENSMUSG00000023176	Cpn2	1300018K11Rik	carboxypeptidase N, polypeptide 2	protein-coding
common_peak1-15352-12-13--0.158578936969966-0.301029995663979	chr4	56864417	56864930	+	0	NA	intron (NM_018761, intron 1 of 18)	intron (NM_018761, intron 1 of 18)	13410	NM_018761	54366	Mm.218891	NM_018761	ENSMUSG00000038816	Ctnnal1	ACRP|AI616177|AW545119|C86009|Catnal1	catenin (cadherin associated protein), alpha-like 1	protein-coding
common_peak2-21495-62-92--0.128407352305946-0.361159883654836	chr11	88717618	88719285	+	0	NA	intron (NM_001042541, intron 1 of 10)	intron (NM_001042541, intron 1 of 10)	-5625	NR_104310	11640	Mm.2969	NM_009648	ENSMUSG00000018428	Akap1	AKAP121|AKAP84|Akap|C76494|C81186|DAKAP1|S-AKAP84	A kinase (PRKA) anchor protein 1	protein-coding
common_peak2-20417-6-6--0.241956811677302-0.947717972411649	chr10	26011372	26011704	+	0	NA	intron (NM_172787, intron 18 of 21)	intron (NM_172787, intron 18 of 21)	62025	NM_001115154	268288	Mm.213322	NM_001013766	ENSMUSG00000051354	Samd3	Gm623	sterile alpha motif domain containing 3	protein-coding
common_peak1-9606-17-12-0.517856620063946-0.647240723060192	chr11	120507955	120508903	+	0	NA	exon (NM_026751, exon 1 of 1)	exon (NM_026751, exon 1 of 1)	1222	NM_026751	68515	Mm.194594	NM_026751	ENSMUSG00000025141	Myadml2	1110012N22Rik	myeloid-associated differentiation marker-like 2	protein-coding
common_peak2-24850-20-22--0.03548717146582-0.301029995663994	chr17	75178492	75179565	+	0	NA	intron (NM_152817, intron 11 of 19)	intron (NM_152817, intron 11 of 19)	61938	NM_152817	74196	Mm.209503	NM_152817	ENSMUSG00000024078	Ttc27	2610511O17Rik	tetratricopeptide repeat domain 27	protein-coding
unique_peak2-38418-1-5--2.2120195109379-1.32905871926422	chr7	24841428	24841860	+	0	NA	TTS (NM_203489)	TTS (NM_203489)	1851	NM_203489	209824	Mm.377233	NM_203489	ENSMUSG00000066723	Vmn1r183	Gm476|V1rd15	vomeronasal 1 receptor 183	protein-coding
unique_peak2-34184-15-17--0.157760250886656-0.307611222530528	chr13	36694507	36695481	+	0	NA	Intergenic	L2a|LINE|L2	131352	NM_153529	68404	Mm.232930	NM_153529	ENSMUSG00000039114	Nrn1	0710008J23Rik|Cpg15|Nrn	neuritin 1	protein-coding
common_peak1-7956-9-15--0.81038659359578-0.630231561310125	chr1	153900108	153900549	+	0	NA	intron (NM_197990, intron 1 of 5)	intron (NM_197990, intron 1 of 5)	37122	NM_197990	69399	Mm.278031	NM_197990	ENSMUSG00000032666	1700025G04Rik	2610510E02Rik|2900042O04Rik|ENSMUSG00000073540	RIKEN cDNA 1700025G04 gene	protein-coding
common_peak2-20542-8-14--0.901668177660948-0.660903317613906	chr10	67547715	67548506	+	0	NA	Intergenic	Intergenic	105764	NM_001081346	170799	Mm.209844	NM_133244	ENSMUSG00000037846	Rtkn2	B130039D23Rik|Mbf|Plekhk1	rhotekin 2	protein-coding
common_peak1-12568-21-20-0.177171842487475-0.380101753845079	chr18	10617727	10618456	+	0	NA	intron (NM_009226, intron 1 of 3)	CpG	297	NM_009226	20641	Mm.603	NM_009226	ENSMUSG00000002477	Snrpd1	AA407109|AL023031|SMD1	small nuclear ribonucleoprotein D1	protein-coding
common_peak1-17423-30-40--0.187876595126211-0.346766333527252	chr7	12834335	12835615	+	0	NA	Intergenic	Intergenic	11053	NM_134210	171244	Mm.377200	NM_134210	ENSMUSG00000094078	Vmn1r81	V1rg9	vomeronasal 1 receptor 81	protein-coding
common_peak2-31385-21-6-1.76213434320863-2.81226952737395	chr8	86445468	86445778	+	0	NA	intron (NM_181039, intron 3 of 22)	intron (NM_181039, intron 3 of 22)	21626	NM_181039	330814	Mm.260733	NM_181039	ENSMUSG00000013033	Lphn1	2900070I05Rik|AI182398|CLIBA|Lec2|mKIAA0821	latrophilin 1	protein-coding
common_peak1-9623-18-17-0.142994149786039-0.353907621462753	chr11	121673297	121674088	+	0	NA	Intergenic	Intergenic	-17840	NM_029049	74675	Mm.61213	NM_029049	ENSMUSG00000039198	Ptchd3	4930451E13Rik|4933440L20Rik|RNDEu-3	patched domain containing 3	protein-coding
common_peak2-32314-27-40--0.366006053722848-0.494448899774786	chrX	57392077	57393086	+	0	NA	intron (NM_001289731, intron 4 of 27)	MTE2b|LTR|MaLR	8296	NM_133197	109904	Mm.93796	NM_133197	ENSMUSG00000031139	Mcf2	B230117G22Rik|Dbl|Mcf-2	mcf.2 transforming sequence	protein-coding
common_peak1-10470-55-78--0.099160877024401-0.323890238933426	chr13	111685873	111687373	+	0	NA	Intergenic	Intergenic	333016	NR_045908	73129	Mm.417826	NR_045908		3110015C05Rik	-	RIKEN cDNA 3110015C05 gene	ncRNA
unique_peak1-1777-8-0-3.00522241794757-2.70926996097583	chr14	51986045	51986562	+	0	NA	Intergenic	RLTR13B1|LTR|ERVK	-21139	NR_045736	75377	Mm.402100	NR_045736		4930597G03Rik	-	RIKEN cDNA 4930597G03 gene	ncRNA
common_peak1-18085-118-102-0.837292155939356-5.47862023412667	chr8	84197054	84199618	+	0	NA	intron (NM_001297596, intron 2 of 24)	MLT1A0|LTR|MaLR	331875	NM_001297593	234515	Mm.324468	NM_001024617	ENSMUSG00000037940	Inpp4b	E130107I17Rik	inositol polyphosphate-4-phosphatase, type II	protein-coding
common_peak2-30839-13-13--0.0288828914198356-0.309074325783021	chr7	133088419	133089124	+	0	NA	intron (NM_001101488, intron 3 of 6)	intron (NM_001101488, intron 3 of 6)	137154	NM_001101488	269994	Mm.39599	NM_001101488	ENSMUSG00000046182	Gsg1l	AI852434|C230098I05Rik|G630023A01Rik|Gm637|g1l	GSG1-like	protein-coding
common_peak1-15663-55-50-0.532194529181207-1.31610797477368	chr4	136143826	136145634	+	0	NA	intron (NM_133872, intron 2 of 18)	intron (NM_133872, intron 2 of 18)	13908	NM_133872	99982	Mm.28540	NM_133872	ENSMUSG00000036940	Kdm1a	1810043O07Rik|AA408884|Aof2|D4Ertd478e|Kdm1|Lsd1|mKIAA0601	lysine (K)-specific demethylase 1A	protein-coding
common_peak2-29357-14-27--0.908138761699959-1.05601013496724	chr5	150611841	150612432	+	0	NA	intron (NR_077242, intron 1 of 4)	RLTR13D2|LTR|ERVK	2190	NR_077242	100861794	Mm.402054	NR_077242		Gm21221	-	predicted gene, 21221	ncRNA
unique_peak2-37543-5-9--1.02630843089322-1.21398586181642	chr5	30849542	30850017	+	0	NA	Intergenic	(GA)n|Simple_repeat|Simple_repeat	-1570	NM_028483	73259	Mm.443299	NM_028483	ENSMUSG00000053194	Cib4	1700041E20Rik	calcium and integrin binding family member 4	protein-coding
common_peak1-10589-42-26-0.987441825703716-2.47480076710857	chr14	30548242	30550044	+	0	NA	Intergenic	RMER17B|LTR|ERVK	-14093	NM_009785	12294	Mm.386754	NM_009785	ENSMUSG00000021991	Cacna2d3	Cacnad3	calcium channel, voltage-dependent, alpha2/delta subunit 3	protein-coding
unique_peak2-34851-17-45--1.30526561785198-2.66231292118422	chr15	76455814	76457126	+	0	NA	promoter-TSS (NM_025842)	promoter-TSS (NM_025842)	-13	NM_025842	66914	Mm.30028	NM_025842	ENSMUSG00000062381	Vps28	1110014J03Rik|AI847241|D730005C08Rik	vacuolar protein sorting 28 (yeast)	protein-coding
common_peak2-21392-10-6-0.549060422951165-1.21398586181642	chr11	80145893	80146249	+	0	NA	intron (NM_139228, intron 6 of 8)	intron (NM_139228, intron 6 of 8)	31657	NM_139228	246104	Mm.194148	NM_139228	ENSMUSG00000017692	Rhbdl3	AI847581|Rhbdl4|Rhomr1|Vrho	rhomboid, veinlet-like 3 (Drosophila)	protein-coding
common_peak2-24158-23-23-0.136805003787924-0.340939137447793	chr16	43363069	43363930	+	0	NA	intron (NM_001285805, intron 4 of 10)	intron (NM_001285805, intron 4 of 10)	56810	NR_046026	626693	Mm.447083	NR_046026	ENSMUSG00000085499	Gm15713	OTTMUSG00000025617	predicted gene 15713	ncRNA
unique_peak1-376-11-2-1.92373108353046-2.32232533660526	chr1	150043171	150043680	+	0	NA	Intergenic	(TTTG)n|Simple_repeat|Simple_repeat	1698608	NM_001145807	215378	Mm.441817	NM_153539	ENSMUSG00000035131	Brinp3	B830045N13Rik|Fam5c	bone morphogenetic protein/retinoic acid inducible neural specific 3	protein-coding
unique_peak2-36454-4-6--0.830815435910851-0.989110657569874	chr2	139821102	139821455	+	0	NA	intron (NM_001159640, intron 6 of 13)	B3|SINE|B2	71263	NM_001159640	75812	Mm.293449	NM_175225	ENSMUSG00000039033	Tasp1	4930485D02Rik|AW986064	taspase, threonine aspartase 1	protein-coding
common_peak2-19998-17-23--0.366666162516118-0.383878263347744	chr1	134099419	134100085	+	0	NA	intron (NM_001033250, intron 1 of 3)	intron (NM_001033250, intron 1 of 3)	5087	NR_029777	723818		NR_029777	miRBase:MI0000646	Mir135b	Mirn135b	microRNA 135b	ncRNA
common_peak1-12153-14-9-0.577288065470282-0.630231561310125	chr17	28349546	28350283	+	0	NA	intron (NM_027185, intron 1 of 10)	RSINE1|SINE|B4	5191	NM_027185	23853	Mm.204731	NM_027185	ENSMUSG00000002257	Def6	2410003F05Rik|6430538D02Rik|AV094905|Ibp|Slat|Slat2|Slat6	differentially expressed in FDCP 6	protein-coding
common_peak1-10733-12-13--0.158578936969966-0.301029995663979	chr14	65331774	65332420	+	0	NA	intron (NM_001081177, intron 3 of 39)	MTB_Mm-int|LTR|MaLR	60729	NM_001081177	16554	Mm.23611	NM_001081177	ENSMUSG00000060012	Kif13b	5330429L19Rik|6030414C01|AI429803|C130021D12Rik|GAKIN	kinesin family member 13B	protein-coding
common_peak2-23486-24-6-1.98585498071011-3.65509904868667	chr15	75216358	75216820	+	0	NA	Intergenic	RMER10B|LTR|ERVL	45670	NR_108041	105892	Mm.38909	NM_001039720	ENSMUSG00000053168	9030619P08Rik	-	lymphocyte antigen 6 complex pseudogene	pseudo
common_peak1-10554-30-72--1.02014914938814-2.95733370545705	chr14	20545844	20546814	+	0	NA	Intergenic	Intergenic	-24150	NM_008695	18074	Mm.20348	NM_008695	ENSMUSG00000021806	Nid2	AW547149|Ly111|NID-2|entactin-2|nidogen-2	nidogen 2	protein-coding
common_peak1-14669-50-34-0.911657299533986-2.56421248726208	chr3	60408093	60409588	+	0	NA	intron (NM_001253708, intron 4 of 8)	intron (NM_001253708, intron 4 of 8)	103666	NM_001253708	56758	Mm.255723	NM_020007	ENSMUSG00000027763	Mbnl1	Mbnl|mKIAA0428	muscleblind-like 1 (Drosophila)	protein-coding
unique_peak1-4134-9-2-1.60465090568306-1.87199725847353	chr2	92424290	92424832	+	0	NA	Intergenic	Intergenic	-7802	NR_106080	102466819		NR_106080	miRBase:MI0023716	Mir7221	mmu-mir-7221	microRNA mir-7221	ncRNA
common_peak1-14743-16-41--1.2740537805107-2.52371590646434	chr3	87174054	87174783	+	0	NA	3' UTR (NM_009690, exon 6 of 6)	3' UTR (NM_009690, exon 6 of 6)	-5891	NM_153090	229499	Mm.255203	NM_153090	ENSMUSG00000059994	Fcrl1	A230020G22Rik|Bxmas1|Bxmh1|Bxmh1b|Fcrh1|Fcrh1l|Fcrh1s|Ifgp1	Fc receptor-like 1	protein-coding
common_peak1-12357-16-24--0.525592547506663-0.561823156887258	chr17	56764722	56765455	+	0	NA	intron (NM_028782, intron 1 of 17)	intron (NM_028782, intron 1 of 17)	1238	NM_028782	74142	Mm.329136	NM_028782	ENSMUSG00000041168	Lonp1	1200017E13Rik|LON|Prss15	lon peptidase 1, mitochondrial	protein-coding
unique_peak2-34557-0-5--3.42509343119537-1.32905871926422	chr14	63908752	63909109	+	0	NA	Intergenic	Lx9|LINE|L1	-44833	NM_008092	14463	Mm.247669	NM_008092	ENSMUSG00000021944	Gata4	Gata-4	GATA binding protein 4	protein-coding
unique_peak1-390-9-5-0.604650905683064-1.21398586181642	chr1	153174699	153175217	+	0	NA	Intergenic	RSINE1|SINE|B4	-16670	NM_001039512	117198	Mm.33764	NM_028582	ENSMUSG00000023150	Ivns1abp	1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850	influenza virus NS1A binding protein	protein-coding
unique_peak2-37241-0-7--3.84013093047421-1.80617997398389	chr4	93505791	93506256	+	0	NA	Intergenic	Intergenic	-503821	NM_026954	69136	Mm.171558	NM_026954	ENSMUSG00000054000	Tusc1	2200001D17Rik|TSG-9	tumor suppressor candidate 1	protein-coding
unique_peak2-37254-6-13--1.2419568116773-1.58711810488664	chr4	103563335	103563898	+	0	NA	Intergenic	Intergenic	-476527	NR_104385	13131	Mm.289682	NM_010014	ENSMUSG00000028519	Dab1	AI956902|C630028C02Rik|scm|scr|scrambler|yot	disabled 1	protein-coding
common_peak2-22179-22-14-0.740393509478886-0.983972868822056	chr12	102262094	102262690	+	0	NA	intron (NM_026681, intron 2 of 29)	intron (NM_026681, intron 2 of 29)	-2414	NR_035421	100316805		NR_035421		Mir1190	Mirn1190|mmu-mir-1190	microRNA 1190	ncRNA
unique_peak1-2986-24-9-1.47128180788035-2.52428350728854	chr17	79295682	79296790	+	0	NA	intron (NM_001163625, intron 3 of 6)	intron (NM_001163625, intron 3 of 6)	10096	NM_001163625	73671	Mm.45514	NM_001163625	ENSMUSG00000038045	Sult6b1	2410078J06Rik|AV101767|ST6B1	sulfotransferase family, cytosolic, 6B, member 1	protein-coding
common_peak1-9184-18-22--0.210642804828661-0.321718508207525	chr11	78696610	78697429	+	0	NA	Intergenic	RMER10A|LTR|ERVL	-37342	NM_010927	18126	Mm.2893	NM_010927	ENSMUSG00000020826	Nos2	NOS-II|Nos-2|Nos2a|i-NOS|iNOS	nitric oxide synthase 2, inducible	protein-coding
unique_peak2-32912-6-5--0.0195643903408542-0.947717972411649	chr10	22392643	22393037	+	0	NA	intron (NM_178934, intron 2 of 4)	intron (NM_178934, intron 2 of 4)	28023	NM_178934	353169	Mm.473705	NM_178934	ENSMUSG00000037490	Slc2a12	GLUT-12|Glut12	solute carrier family 2 (facilitated glucose transporter), member 12	protein-coding
unique_peak1-4122-7-5-0.214128329577033-1.01466476204226	chr2	86181997	86182503	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	5671	NM_147021	259023	Mm.377794	NM_147021	ENSMUSG00000075189	Olfr1055	MOR186-1	olfactory receptor 1055	protein-coding
common_peak1-10549-25-18-0.613922391901521-0.86528749982161	chr14	20081816	20082681	+	0	NA	Intergenic	L1M4c|LINE|L1	339561	NM_001024706	432825	Mm.327147	NM_001024706	ENSMUSG00000095024	Gm5458	EG432825	predicted gene 5458	protein-coding
common_peak2-28073-14-22--0.624345795699369-0.590343908676233	chr4	76423680	76424655	+	0	NA	intron (NM_011211, intron 8 of 39)	intron (NM_011211, intron 8 of 39)	1433632	NM_011211	19266	Mm.184021	NM_011211	ENSMUSG00000028399	Ptprd	1110002J03Rik|3000002J10Rik|B230219D21Rik|R-PTP-delta	protein tyrosine phosphatase, receptor type, D	protein-coding
common_peak2-30963-19-34--0.72659569028328-0.974620203848502	chr8	107150012	107151387	+	0	NA	Intergenic	B4A|SINE|B4	-2403	NM_001252628	12556	Mm.19423	NM_007663	ENSMUSG00000031881	Cdh16	-	cadherin 16	protein-coding
common_peak2-19948-7-10--0.660340788339108-1.12966497611638	chr1	131526453	131526956	+	0	NA	intron (NM_172485, intron 5 of 27)	Lx8|LINE|L1	356823	NM_172485	210417	Mm.380518	NM_172485	ENSMUSG00000042581	Thsd7b	1700074E13Rik|B930082A18|D130067I03Rik	thrombospondin, type I, domain containing 7B	protein-coding
unique_peak1-1763-12-2-2.06381348436648-2.79529063155376	chr13	109776227	109776826	+	0	NA	intron (NM_011056, intron 2 of 16)	GA-rich|Low_complexity|Low_complexity	332155	NM_011056	238871	Mm.434429	NM_011056		Pde4d	9630011N22Rik|Dpde3	phosphodiesterase 4D, cAMP specific	protein-coding
unique_peak1-3399-8-1-2.00522241794757-2.05605744720049	chr19	4487548	4488076	+	0	NA	Intergenic	B3|SINE|B2	-10669	NM_134164	171180	Mm.262270	NM_134164	ENSMUSG00000049303	Syt12	-	synaptotagmin XII	protein-coding
common_peak2-23517-12-13--0.158578936969966-0.301029995663979	chr15	76874372	76874808	+	0	NA	promoter-TSS (NM_001163621)	promoter-TSS (NM_001163621)	-915	NM_001163621	71939	Mm.34173	NM_028010	ENSMUSG00000033576	Apol6	2310076O14Rik	apolipoprotein L 6	protein-coding
common_peak2-28471-12-9-0.326847890200276-0.459837087125828	chr4	154142333	154142850	+	0	NA	Intergenic	Intergenic	-87718	NM_172878	242800	Mm.72944	NM_172878	ENSMUSG00000046637	Ttc34	4932418L02|B230396O12Rik	tetratricopeptide repeat domain 34	protein-coding
common_peak2-29246-21-32--0.474904854092218-0.550049347815239	chr5	139483619	139484461	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-13133	NM_008808	18590	Mm.2675	NM_008808	ENSMUSG00000025856	Pdgfa	-	platelet derived growth factor, alpha	protein-coding
common_peak1-18371-26-46--0.626689759519175-1.0379745517287	chr8	70527435	70528425	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-29457	NM_177698	234353	Mm.32525	NM_027626	ENSMUSG00000030465	Psd3	4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D	pleckstrin and Sec7 domain containing 3	protein-coding
common_peak2-31423-5-6--0.511735258063458-0.947717972411649	chr8	94681827	94682247	+	0	NA	Intergenic	Intergenic	197982	NR_110452	71296	Mm.86664	NR_033641	ENSMUSG00000031736	Crnde	4933436C20Rik	colorectal neoplasia differentially expressed (non-protein coding)	ncRNA
common_peak1-15081-47-73--0.274611940862402-0.534695158203301	chr3	127779366	127780925	+	0	NA	Intergenic	RLTR25B|LTR|ERVK	154378	NR_045704	402774	Mm.209170	NR_045704		D030025E07Rik	-	RIKEN cDNA D030025E07 gene	ncRNA
common_peak2-25704-27-17-0.821620949452924-1.31432283146954	chr19	20393612	20394401	+	0	NA	Intergenic	Lx6|LINE|L1	71155	NM_010730	16952	Mm.248360	NM_010730	ENSMUSG00000024659	Anxa1	Anx-1|Anx-A1|C430014K04Rik|Lpc-1|Lpc1	annexin A1	protein-coding
common_peak1-16742-26-25-0.22745937401737-0.399869693390336	chr6	31217677	31218734	+	0	NA	intron (NR_040257, intron 2 of 7)	intron (NR_040257, intron 2 of 7)	47854	NR_040261	73652	Mm.441297	NR_040257	ENSMUSG00000087380	2210408F21Rik	-	RIKEN cDNA 2210408F21 gene	ncRNA
common_peak2-24920-30-19-0.84774731460451-1.46094028072561	chr17	87202386	87203425	+	0	NA	intron (NM_010137, intron 2 of 15)	B1_Mur1|SINE|Alu	49701	NM_010137	13819	Mm.1415	NM_010137	ENSMUSG00000024140	Epas1	HIF-2alpha|HIF2A|HLF|HRF|MOP2|bHLHe73	endothelial PAS domain protein 1	protein-coding
unique_peak1-6217-10-4-1.03448725012141-1.5150158574804	chr7	123109059	123109577	+	0	NA	intron (NM_001025559, intron 1 of 15)	intron (NM_001025559, intron 1 of 15)	29282	NM_011445	20679	Mm.323365	NM_011445	ENSMUSG00000051910	Sox6	AI987981|SOX-LZ	SRY (sex determining region Y)-box 6	protein-coding
common_peak1-17474-37-36-0.316539705856869-0.566504029620424	chr7	19951466	19952782	+	0	NA	intron (NM_001010836, intron 1 of 12)	B4A|SINE|B4	5559	NM_001010836	333654	Mm.333640	NM_001010836	ENSMUSG00000040734	Ppp1r13l	AV260376|IASPP|Nkip1|wa3	protein phosphatase 1, regulatory (inhibitor) subunit 13 like	protein-coding
unique_peak2-34379-10-26--1.3984721571547-1.90052685918624	chr13	114735507	114736394	+	0	NA	intron (NM_172595, intron 3 of 4)	L1MA10|LINE|L1	151234	NM_172595	218639	Mm.79837	NM_172595	ENSMUSG00000042348	Arl15	A430036I03|Arfrp2|C230032K13Rik	ADP-ribosylation factor-like 15	protein-coding
unique_peak2-37104-3-7--1.41398308995928-1.23214870625617	chr4	45497872	45498440	+	0	NA	intron (NM_001033306, intron 2 of 5)	intron (NM_001033306, intron 2 of 5)	45544	NM_001033306	230126	Mm.251716	NM_001033306	ENSMUSG00000044813	Shb	BC028832	src homology 2 domain-containing transforming protein B	protein-coding
unique_peak1-4934-7-1-1.79909083029819-1.80617997398389	chr4	63254186	63254643	+	0	NA	Intergenic	Intergenic	7384	NR_028584	670833	Mm.32213	NR_028583	ENSMUSG00000084782	Gm11213	OTTMUSG00000000252	predicted gene 11213	ncRNA
unique_peak1-2027-13-1-2.77847203063777-3.64038867156802	chr15	10833668	10834188	+	0	NA	Intergenic	(GA)n|Simple_repeat|Simple_repeat	-48159	NM_030888	81799	Mm.280158	NM_030888	ENSMUSG00000058914	C1qtnf3	2310005P21Rik|CORS-26|CORS26|CTRP3|Corcs|Cors	C1q and tumor necrosis factor related protein 3	protein-coding
unique_peak2-39714-4-12--1.72390023199434-1.85743853830261	chr9	119101888	119102401	+	0	NA	TTS (NM_133980)	TTS (NM_133980)	-2633	NM_001037749	382113	Mm.335525	NM_001037749	ENSMUSG00000070280	Slc22a14	Gm1128	solute carrier family 22 (organic cation transporter), member 14	protein-coding
unique_peak1-3736-7-3-0.799090830298189-1.23214870625617	chr19	46967655	46968060	+	0	NA	intron (NM_029810, intron 11 of 17)	intron (NM_029810, intron 11 of 17)	68984	NM_029810	76952	Mm.40965	NM_029810	ENSMUSG00000025041	Nt5c2	2010002I23Rik|CnII|ENSMUSG00000025039|Gm9751|Gmp|Nt5b|Pnt5|cN-II	5'-nucleotidase, cytosolic II	protein-coding
unique_peak1-5347-8-8--0.164702583494742-1.00793137938329	chr5	91567711	91568166	+	0	NA	promoter-TSS (NM_009704)	promoter-TSS (NM_009704)	-703	NM_009704	11839	Mm.8039	NM_009704	ENSMUSG00000029378	Areg	AR|Sdgf	amphiregulin	protein-coding
common_peak1-14167-26-23-0.342936591437306-0.502376547007663	chr2	140169817	140171134	+	0	NA	intron (NM_001033296, intron 1 of 19)	L1_Mus1|LINE|L1	44971	NM_001033296	228684	Mm.486585	NM_001033296	ENSMUSG00000074764	Sel1l2	Gm118	sel-1 suppressor of lin-12-like 2 (C. elegans)	protein-coding
common_peak1-19186-12-6-0.841421063030034-1.58711810488664	chr9	99414191	99414762	+	0	NA	intron (NM_028768, intron 12 of 21)	intron (NM_028768, intron 12 of 21)	43636	NR_028123	69797	Mm.307159	NR_028123		1600029I14Rik	-	RIKEN cDNA 1600029I14 gene	ncRNA
unique_peak1-5088-8-0-3.00522241794757-2.70926996097583	chr4	145239337	145239841	+	0	NA	Intergenic	Intergenic	-21011	NM_001103158	100041379	Mm.276881	NM_001103158	ENSMUSG00000058186	Gm13242	OTTMUSG00000011070	predicted gene 13242	protein-coding
common_peak2-31453-16-6-1.31090872021046-1.49151883326344	chr8	104886783	104887170	+	0	NA	Intergenic	Intergenic	422035	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
unique_peak2-32768-11-16--0.578769256998726-0.503257505534083	chr1	172206141	172206839	+	0	NA	promoter-TSS (NM_012009)	promoter-TSS (NM_012009)	-965	NM_012009	26904	Mm.57009	NM_012009	ENSMUSG00000096334	Sh2d1b1	EAT-2|EAT-2A|Eat2|Eat2a|Sh2d1b	SH2 domain protein 1B1	protein-coding
unique_peak2-38105-9-8-0.0196884049619079-1.03275496310833	chr6	70911892	70912356	+	0	NA	Intergenic	Intergenic	5524	NM_001101464	232077	Mm.297656	NM_001101464	ENSMUSG00000055874	Foxi3	-	forkhead box I3	protein-coding
unique_peak1-6684-8-0-3.00522241794757-2.70926996097583	chr8	26746980	26747413	+	0	NA	intron (NM_001001735, intron 1 of 9)	intron (NM_001001735, intron 1 of 9)	-3560	NM_001081269	234135	Mm.217337	NM_001001735	ENSMUSG00000054823	Whsc1l1	6720429E03|A530023P05|AI528490|NSD3|WHISTLE	Wolf-Hirschhorn syndrome candidate 1-like 1 (human)	protein-coding
common_peak2-23507-16-13-0.310908720210457-0.417187467413082	chr15	76460756	76461307	+	0	NA	exon (NM_183091, exon 22 of 26)	exon (NM_183091, exon 22 of 26)	-4574	NM_025842	66914	Mm.30028	NM_025842	ENSMUSG00000062381	Vps28	1110014J03Rik|AI847241|D730005C08Rik	vacuolar protein sorting 28 (yeast)	protein-coding
common_peak2-20565-11-5-0.923731083530457-1.477227296591	chr10	75517440	75517876	+	0	NA	Intergenic	ETnERV2-int|LTR|ERVK	22301	NM_177475	64453	Mm.80609	NM_177475	ENSMUSG00000049764	Zfp280b	D10Jhu82e|Suhw2	zinc finger protein 280B	protein-coding
common_peak2-30458-19-14-0.495796731053168-0.607095980551316	chr7	45601710	45602122	+	0	NA	Intergenic	Intergenic	917988	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak2-33542-5-13--1.51173525806346-1.78669045979184	chr11	78366552	78367165	+	0	NA	Intergenic	RLTR25B|LTR|ERVK	-2621	NM_133706	69071	Mm.29431	NM_133706	ENSMUSG00000037278	Tmem97	1810014L12Rik|AI115531|AL022956|D11Bhm182e	transmembrane protein 97	protein-coding
common_peak1-11951-61-48-0.768039485634132-2.35648075798278	chr17	5769345	5771203	+	0	NA	Intergenic	Intergenic	-28383	NR_045081	78512	Mm.23696	NR_045079	ENSMUSG00000096965	3300005D01Rik	-	RIKEN cDNA 3300005D01 gene	ncRNA
unique_peak1-2329-7-0-2.79909083029819-2.40823996531185	chr15	83442584	83443054	+	0	NA	intron (NM_022723, intron 18 of 21)	intron (NM_022723, intron 18 of 21)	-17232	NM_183017	223723	Mm.46778	NM_183017	ENSMUSG00000016757	Ttll12	BC055368|D430005B17	tubulin tyrosine ligase-like family, member 12	protein-coding
unique_peak1-1511-7-6--0.00826409175941478-0.97990265578305	chr13	4608644	4609214	+	0	NA	promoter-TSS (NM_018859)	promoter-TSS (NM_018859)	-519	NM_018859	56043	Mm.251908	NM_018859	ENSMUSG00000045410	Akr1e1	1810061I10Rik|Akr1e2	aldo-keto reductase family 1, member E1	protein-coding
unique_peak2-33141-1-12--3.32749672835784-3.1004765869889	chr10	83954483	83954735	+	0	NA	intron (NR_108059, intron 1 of 3)	intron (NR_108059, intron 1 of 3)	3571	NR_108059	75804		NR_108059	ENSMUSG00000020033	4930463O16Rik	-	RIKEN cDNA 4930463O16 gene	ncRNA
unique_peak2-35643-1-7--2.62705701021674-1.80617997398389	chr17	94002497	94002870	+	0	NA	Intergenic	L1_Rod|LINE|L1	403921	NM_009625	11516	Mm.3407	NM_009625	ENSMUSG00000024256	Adcyap1	PACAP	adenylate cyclase activating polypeptide 1	protein-coding
unique_peak1-166-60-8-3.18436686017822-15.6693595472834	chr1	74030031	74032401	+	0	NA	intron (NM_001289895, intron 16 of 32)	intron (NM_001289895, intron 16 of 32)	-120176	NR_045311	109198	Mm.359721	NR_045311		6030407O03Rik	-	RIKEN cDNA 6030407O03 gene	ncRNA
unique_peak2-39221-7-7--0.200909169701811-0.97990265578305	chr8	108722845	108723267	+	0	NA	TTS (NM_178798)	TTS (NM_178798)	11777	NM_001007567	66432	Mm.269029	NM_001007567	ENSMUSG00000033106	Slc7a6os	2010007L18Rik|2400002F02Rik	solute carrier family 7, member 6 opposite strand	protein-coding
common_peak2-21212-25-18-0.613922391901521-0.86528749982161	chr11	61665235	61666050	+	0	NA	intron (NM_013881, intron 2 of 26)	B3|SINE|B2	2952	NM_013881	29869	Mm.162025	NM_013881	ENSMUSG00000004798	Ulk2	A830085I22Rik|AU015340|Unc51.2|mKIAA0623	unc-51 like kinase 2	protein-coding
unique_peak2-32445-4-7--1.02346051385325-1.09384600808989	chr1	171064970	171065386	+	0	NA	Intergenic	Intergenic	396417	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
unique_peak1-508-14-0-3.89921616035764-4.8164799306237	chr1	182136863	182137500	+	0	NA	Intergenic	Intergenic	-11030	NM_023341	67426	Mm.38330	NM_023341	ENSMUSG00000026489	Adck3	4632432J16Rik|AI462003|Cabc1|mKIAA0451	aarF domain containing kinase 3	protein-coding
common_peak2-32069-36-94--1.09053452216319-4.13372351590029	chr9	94537535	94539109	+	0	NA	Intergenic	L1Md_A|LINE|L1	-31989	NM_177909	331004	Mm.326125	NM_177909	ENSMUSG00000031129	Slc9a9	5730527A11Rik|9930105B05|AI854429|Nhe9	solute carrier family 9 (sodium/hydrogen exchanger), member 9	protein-coding
unique_peak1-267-16-6-1.31090872021046-1.49151883326344	chr1	93326185	93327152	+	0	NA	intron (NM_011066, intron 16 of 22)	intron (NM_011066, intron 16 of 22)	-16869	NM_019479	55927	Mm.280029	NM_019479	ENSMUSG00000067071	Hes6	AI326893|bHLHb41	hairy and enhancer of split 6	protein-coding
unique_peak2-39538-9-8-0.0196884049619079-1.03275496310833	chr9	67024460	67024973	+	0	NA	Intergenic	Intergenic	43348	NR_045748	100502636	Mm.412607	NR_045748		Gm19299	-	predicted gene, 19299	ncRNA
unique_peak2-36155-3-7--1.41398308995928-1.23214870625617	chr2	25363021	25363515	+	0	NA	Intergenic	Intergenic	-6029	NM_001271777	69379	Mm.24596	NM_027062	ENSMUSG00000015083	C8g	-	complement component 8, gamma polypeptide	protein-coding
unique_peak1-2312-16-3-2.11826364226806-2.65002542325363	chr15	81838643	81839401	+	0	NA	intron (NM_134095, intron 1 of 5)	PB1D7|SINE|Alu	7548	NM_134095	28075	Mm.474453	NM_134095	ENSMUSG00000022472	Desi1	AI427858|AI850401|D15Wsu75e|DeSI-1|Fam152b|Pppde2	desumoylating isopeptidase 1	protein-coding
unique_peak2-35036-5-7--0.704380336005853-1.01466476204226	chr16	20414257	20414693	+	0	NA	intron (NM_176839, intron 2 of 6)	intron (NM_176839, intron 2 of 6)	11992	NM_013790	27416	Mm.20845	NM_013790	ENSMUSG00000022822	Abcc5	2900011L11Rik|AI132311|Abcc5a|Abcc5b|Mrp5	ATP-binding cassette, sub-family C (CFTR/MRP), member 5	protein-coding
common_peak1-9521-24-39--0.528718192119646-0.694972475810969	chr11	115707805	115708795	+	0	NA	exon (NM_145438, exon 7 of 26)	exon (NM_145438, exon 7 of 26)	22928	NM_001252532	217325	Mm.290450	NM_145438	ENSMUSG00000020782	Llgl2	9130006H11Rik|Llglh2	lethal giant larvae homolog 2 (Drosophila)	protein-coding
common_peak1-13299-14-13-0.0918612383000403-0.332077462497413	chr19	40513019	40513599	+	0	NA	intron (NM_001034962, intron 1 of 22)	intron (NM_001034962, intron 1 of 22)	12579	NM_001034962	20411	Mm.210815	NM_009166		Sorbs1	2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296	sorbin and SH3 domain containing 1	protein-coding
common_peak2-28165-8-6-0.197867495889966-1.03789460276074	chr4	108300736	108301026	+	0	NA	intron (NM_177045, intron 15 of 24)	intron (NM_177045, intron 15 of 24)	8320	NM_177045	319965	Mm.151129	NM_177045	ENSMUSG00000028582	Cc2d1b	A830039B04Rik|Freud2	coiled-coil and C2 domain containing 1B	protein-coding
common_peak1-8031-17-10-0.75886471956774-0.917676348953458	chr1	171038053	171038681	+	0	NA	Intergenic	L1Md_A|LINE|L1	423228	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
common_peak1-14943-35-48--0.183339585652704-0.360715883817177	chr3	103255855	103256926	+	0	NA	Intergenic	Lx8|LINE|L1	-122815	NM_001276679	54524	Mm.88818	NM_018800	ENSMUSG00000027849	Syt6	3110037A08Rik|AW048930|sytVI	synaptotagmin VI	protein-coding
common_peak2-30279-49-56-0.173393808860443-0.416927796942778	chr7	16614143	16615205	+	0	NA	Intergenic	ZP3AR|Satellite|Satellite	-29830	NM_001081418	243842	Mm.440249	NM_001081418	ENSMUSG00000070808	Gltscr1	-	glioma tumor suppressor candidate region gene 1	protein-coding
unique_peak1-3572-12-2-2.06381348436648-2.79529063155376	chr19	28827779	28828343	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-73494	NM_175459	226075	Mm.223508	NM_175459		Glis3	4833409N03Rik|E230012L24|E330013K21Rik	GLIS family zinc finger 3	protein-coding
unique_peak1-5814-31-3-3.22523867081312-7.71465772374253	chr6	69516034	69516549	+	0	NA	Intergenic	Lx8|LINE|L1	-239123	NR_004434	19783		NR_004434		Rprl1	Rmrp2|Rpr|Rprh2	ribonuclease P RNA-like 1	ncRNA
common_peak2-27712-6-7--0.434601889619698-0.97990265578305	chr3	122365496	122365810	+	0	NA	Intergenic	Intergenic	-43021	NM_153118	214459	Mm.209491	NM_153118	ENSMUSG00000039735	Fnbp1l	2610318I01Rik|AW548221|TOCA1|toca-1	formin binding protein 1-like	protein-coding
unique_peak2-32863-1-8--2.79698201165906-2.05605744720049	chr10	116244465	116244850	+	0	NA	intron (NM_001033333, intron 13 of 24)	B4|SINE|B4	-78424	NR_045345	72286	Mm.396207	NR_045345		1700030O20Rik	-	RIKEN cDNA 1700030O20 gene	ncRNA
unique_peak2-38186-14-22--0.624345795699369-0.590343908676233	chr6	95040608	95041613	+	0	NA	Intergenic	Intergenic	-26764	NM_001102670	243574	Mm.333275	NM_001008785	ENSMUSG00000030031	Kbtbd8	AU040152|SSEC-51|SSEC51|Takrp|mKIAA1842	kelch repeat and BTB (POZ) domain containing 8	protein-coding
unique_peak2-35724-1-6--2.43441193227435-1.56314192529759	chr18	34887537	34887872	+	0	NA	Intergenic	Intergenic	-7663	NM_010280	14587	Mm.16520	NM_010280	ENSMUSG00000024366	Gfra3	GFRalpha3|Y15110	glial cell line derived neurotrophic factor family receptor alpha 3	protein-coding
common_peak2-26339-34-61--0.572127783385609-1.06647553678992	chr2	35200269	35201079	+	0	NA	Intergenic	Intergenic	-8145	NM_013515	13830	Mm.295284	NM_013515	ENSMUSG00000026880	Stom	Epb7.2	stomatin	protein-coding
common_peak2-19862-50-25-1.34050059833786-4.46039286243102	chr1	92215052	92215744	+	0	NA	Intergenic	L1MC4|LINE|L1	114843	NM_007722	12778	Mm.6522	NM_007722		Ackr3	AW541270|CXC-R7|CXCR-7|Cmkor1|Cxcr7|RDC-1|Rdc1	atypical chemokine receptor 3	protein-coding
common_peak1-9803-98-41-1.80945127065179-14.0727798524116	chr12	69361138	69362438	+	0	NA	Intergenic	URR1A|DNA|MER1_type	-591530	NR_033146	100316870	Mm.379794	NR_033146		Gm17821	-	DDB1 and CUL4 associated factor 5 pseudogene	pseudo
common_peak2-23591-7-8--0.370834171144123-1.00793137938329	chr15	80167882	80168299	+	0	NA	intron (NM_001044308, intron 5 of 36)	intron (NM_001044308, intron 5 of 36)	50422	NM_001044308	239556	Mm.291058	NM_001044308	ENSMUSG00000022416	Cacna1i	Ca(V)3.3	calcium channel, voltage-dependent, alpha 1I subunit	protein-coding
common_peak2-21610-14-18--0.348711353085941-0.360333814299795	chr11	100146268	100147076	+	0	NA	Intergenic	Intergenic	-15487	NM_212483	68239	Mm.158190	NM_212483	ENSMUSG00000053654	Krt42	2410039E07Rik|K17n|Ka22|ecat6	keratin 42	protein-coding
common_peak1-17617-18-25--0.38752056691274-0.421916810733234	chr7	45558274	45559020	+	0	NA	Intergenic	Intergenic	961257	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak1-15750-11-24--1.13516260552311-1.3750876294627	chr4	149518005	149518718	+	0	NA	TTS (NM_019741)	TTS (NM_019741)	-4720	NM_001085529	435818	Mm.359648	NM_001085529	ENSMUSG00000062064	Slc2a7	OTTMUSG00000010396	solute carrier family 2 (facilitated glucose transporter), member 7	protein-coding
unique_peak2-36568-5-10--1.16381195464315-1.33892459842472	chr2	170147402	170147837	+	0	NA	Intergenic	Intergenic	-34242	NR_040610	73303	Mm.443297	NR_040610	ENSMUSG00000086999	Bcas1os2	1700040N02Rik	breast carcinoma amplified sequence 1, opposite strand 2	ncRNA
common_peak2-22108-14-11-0.314253659636488-0.435191258261915	chr12	80462950	80463592	+	0	NA	intron (NM_009014, intron 7 of 10)	intron (NM_009014, intron 7 of 10)	64933	NM_001252562	19363	Mm.341756	NM_009014	ENSMUSG00000059060	Rad51b	AI553500|R51H2|Rad51l1|mREC2	RAD51 homolog B	protein-coding
unique_peak1-906-9-1-2.18961340640422-2.31132995230379	chr11	40444748	40445230	+	0	NA	Intergenic	MT2_Mm|LTR|ERVL	61195	NM_134017	108645	Mm.293771	NM_134017	ENSMUSG00000042032	Mat2b	1110064C04Rik|2410018D16Rik|AI182287|AU022853|MAT-II|MATIIbeta|TGR	methionine adenosyltransferase II, beta	protein-coding
unique_peak1-1181-9-5-0.604650905683064-1.21398586181642	chr11	100528113	100528521	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-16310	NM_177790	278304	Mm.274734	NM_177790	ENSMUSG00000014198	Zfp385c	A930006D11Rik|Znf385c	zinc finger protein 385C	protein-coding
common_peak2-24903-17-11-0.633333837483882-0.769930178837768	chr17	84113854	84114669	+	0	NA	intron (NM_001171053, intron 3 of 13)	B2_Mm2|SINE|B2	8758	NM_001171052	116871	Mm.277668	NM_054082	ENSMUSG00000055817	Mta3	1110002J22Rik|mKIAA1266	metastasis associated 3	protein-coding
unique_peak2-35438-10-8-0.186490343566457-1.078512453669	chr17	34965888	34966470	+	0	NA	intron (NM_019442, intron 4 of 6)	MuRRS4-int|LTR|ERV1	-5780	NM_011413	625018	Mm.439678	NM_011413		C4a	Slp	complement component 4A (Rodgers blood group)	protein-coding
common_peak2-20439-34-63--0.617931472998734-1.219227950326	chr10	34282127	34283051	+	0	NA	intron (NM_010237, intron 3 of 8)	intron (NM_010237, intron 3 of 8)	79383	NM_010237	14302	Mm.332432	NM_010237	ENSMUSG00000019779	Frk	BSK|BSK/IYK|C85044|GTK|RAK	fyn-related kinase	protein-coding
common_peak1-9032-23-43--0.737664114128217-1.21996307277154	chr11	62281190	62282108	+	0	NA	intron (NM_001039536, intron 1 of 6)	intron (NM_001039536, intron 1 of 6)	9687	NM_001039536	327942	Mm.390358	NM_199026		Pigl	Gm737	phosphatidylinositol glycan anchor biosynthesis, class L	protein-coding
common_peak2-20977-9-10--0.269818212233077-1.05503135781948	chr11	20859444	20859946	+	0	NA	Intergenic	Intergenic	-128584	NM_173752	216551	Mm.76694	NM_173752	ENSMUSG00000042363	Lgalsl	1110067D22Rik|A530071M23|Grpa|Hspc159|Lgalsla	lectin, galactoside binding-like	protein-coding
unique_peak1-547-13-8-0.608547029195456-0.660903317613904	chr1	191639833	191640405	+	0	NA	intron (NM_008976, intron 3 of 18)	intron (NM_008976, intron 3 of 18)	87972	NM_008976	19250	Mm.4498	NM_008976	ENSMUSG00000026604	Ptpn14	C130080N23Rik|OTTMUSG00000022087|PTP36	protein tyrosine phosphatase, non-receptor type 14	protein-coding
common_peak1-11242-23-14-0.814876908900562-1.09492971584134	chr15	79891762	79892753	+	0	NA	Intergenic	Intergenic	16752	NR_028282	100302601		NR_028282		Snord83b	MBII-10	small nucleolar RNA, C/D box 83B	snoRNA
common_peak1-19074-11-5-0.923731083530457-1.477227296591	chr9	70230839	70231435	+	0	NA	intron (NM_181072, intron 25 of 27)	RLTR28|LTR|ERVL	22423	NR_049200	100885839		NR_049200	miRBase:MI0019195	Mir5626	mmu-mir-5626	microRNA mir-5626	ncRNA
unique_peak1-2898-10-1-2.35641534500877-2.57096726280955	chr17	45684856	45685382	+	0	NA	intron (NM_001013749, intron 1 of 2)	intron (NM_001013749, intron 1 of 2)	1507	NM_001013749	210573	Mm.329064	NM_001013749	ENSMUSG00000096847	Tmem151b	Gm323	transmembrane protein 151B	protein-coding
common_peak1-13534-95-24-2.50405915524929-20.4840813647083	chr2	167542710	167545007	+	0	NA	Intergenic	(CCAA)n|Simple_repeat|Simple_repeat	27181	NR_015500	329562	Mm.123101	NM_177851	ENSMUSG00000006462	A530013C23Rik	-	RIKEN cDNA A530013C23 gene	ncRNA
common_peak1-17625-29-47--0.472672420106045-0.683734619884041	chr7	45813512	45814431	+	0	NA	Intergenic	Intergenic	705933	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak1-14928-11-8-0.338768582809301-1.14218153353838	chr3	101212142	101212854	+	0	NA	intron (NM_207205, intron 2 of 10)	intron (NM_207205, intron 2 of 10)	31450	NM_207205	78908	Mm.257997	NM_207205	ENSMUSG00000042035	Igsf3	1700016K10Rik|2810035F16Rik|4833439O17Rik|mKIAA0466	immunoglobulin superfamily, member 3	protein-coding
unique_peak2-37766-5-14--1.61127093161437-1.95509489018123	chr5	115279636	115280257	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	-6469	NM_181075	330173	Mm.482205	NM_181075	ENSMUSG00000092486	2610524H06Rik	-	RIKEN cDNA 2610524H06 gene	protein-coding
common_peak1-17166-38-20-1.17913523651977-2.88064294409843	chr6	120114058	120116035	+	0	NA	intron (NM_016718, intron 1 of 3)	intron (NM_016718, intron 1 of 3)	71648	NM_016718	29862	Mm.103668	NM_016718	ENSMUSG00000041377	Ninj2	-	ninjurin 2	protein-coding
common_peak1-7712-37-53--0.228894430677649-0.408596647434913	chr1	87326969	87328017	+	0	NA	Intergenic	Intergenic	167892	NM_030194	109032	Mm.335802	NM_030194	ENSMUSG00000070034	Sp110	5031415C07Rik|52kDa|5830484A20Rik|ENSMUSG00000075603|Ifi75|Ipr1	Sp110 nuclear body protein	protein-coding
common_peak2-31641-13-8-0.608547029195456-0.660903317613904	chr8	123982973	123983549	+	0	NA	Intergenic	Intergenic	82593	NM_029597	76405	Mm.165697	NM_029597	ENSMUSG00000031809	1700018B08Rik	1700084O22Rik	RIKEN cDNA 1700018B08 gene	protein-coding
common_peak1-13906-44-43-0.362461215931238-0.728039925316326	chr2	79635322	79636541	+	0	NA	intron (NM_001290743, intron 4 of 4)	RMER17A2|LTR|ERVK	87994	NM_001290743	75276	Mm.257373	NM_172420	ENSMUSG00000034683	Ppp1r1c	4930565M23Rik|4930579P15Rik	protein phosphatase 1, regulatory (inhibitor) subunit 1C	protein-coding
common_peak1-17071-12-9-0.326847890200276-0.459837087125828	chr6	108212131	108212790	+	0	NA	intron (NM_010585, intron 4 of 61)	intron (NM_010585, intron 4 of 61)	49370	NM_010585	16438	Mm.227912	NM_010585	ENSMUSG00000030102	Itpr1	D6Pas2|ENSMUSG00000072853|Gm10429|IP3R1|InsP3R|Ip3r|Itpr-1|P400|Pcp-1|Pcp1|opt	inositol 1,4,5-trisphosphate receptor 1	protein-coding
unique_peak1-4841-7-0-2.79909083029819-2.40823996531185	chr3	152147757	152148257	+	0	NA	intron (NM_001081277, intron 10 of 13)	intron (NM_001081277, intron 10 of 13)	88359	NM_001287139	108946	Mm.379292	NM_198416	ENSMUSG00000039068	Zzz3	3110065C23Rik|6430567E01Rik|AA408566|AI481057|AW556059|R75514	zinc finger, ZZ domain containing 3	protein-coding
common_peak1-10295-33-55--0.476017359532075-0.817484656603571	chr13	63431056	63432384	+	0	NA	intron (NM_001042673, intron 10 of 15)	ID4|SINE|ID	-29129	NR_037235	100526474		NR_037235		Mir3074-1	mmu-mir-3074-1	microRNA 3074-1	ncRNA
common_peak2-27240-10-19--0.965512749878593-0.917676348953458	chr3	52101367	52102226	+	0	NA	intron (NM_019739, intron 1 of 2)	intron (NM_019739, intron 1 of 2)	29537	NM_019739	56458	Mm.29891	NM_019739	ENSMUSG00000044167	Foxo1	AI876417|Afxh|FKHR|Fkhr1|Foxo1a	forkhead box O1	protein-coding
unique_peak1-3537-15-5-1.4272022498345-1.61682445937017	chr19	21646459	21647233	+	0	NA	Intergenic	Intergenic	80435	NM_025423	66206	Mm.272430	NM_025423	ENSMUSG00000035171	1110059E24Rik	-	RIKEN cDNA 1110059E24 gene	protein-coding
common_peak2-27852-14-21--0.560215458279653-0.519193887192484	chr3	152507993	152508905	+	0	NA	intron (NM_012028, intron 3 of 4)	(TCTCTG)n|Simple_repeat|Simple_repeat	131385	NM_025662	329777	Mm.331447	NM_025662	ENSMUSG00000039047	Pigk	3000001O05Rik	phosphatidylinositol glycan anchor biosynthesis, class K	protein-coding
common_peak2-28090-1-6--2.43441193227435-1.56314192529759	chr4	86668515	86668951	+	0	NA	intron (NM_172426, intron 7 of 10)	B1_Mur2|SINE|Alu	148415	NM_139306	230379	Mm.45019	NM_139306	ENSMUSG00000038007	Acer2	2410116I05Rik|Asah3l|CRG-L1|maCER2	alkaline ceramidase 2	protein-coding
common_peak1-18458-40-33-0.571512841500759-1.1451285992054	chr8	84066616	84067479	+	0	NA	intron (NM_001297596, intron 2 of 24)	intron (NM_001297596, intron 2 of 24)	200586	NM_001297593	234515	Mm.324468	NM_001024617	ENSMUSG00000037940	Inpp4b	E130107I17Rik	inositol polyphosphate-4-phosphatase, type II	protein-coding
unique_peak2-37326-7-16--1.28837201095215-1.08658567012551	chr4	129377060	129378023	+	0	NA	Intergenic	Intergenic	-3459	NM_199305	230770	Mm.257157	NM_199305	ENSMUSG00000053730	Tmem39b	6330509E05Rik|BC037095	transmembrane protein 39b	protein-coding
unique_peak1-3425-12-1-2.64877598508764-3.36932189928148	chr19	6304262	6304802	+	0	NA	Intergenic	Intergenic	-1925	NM_001033342	240505	Mm.329622	NM_001033342	ENSMUSG00000024769	Cdc42bpg	BC046418|MRCKgamma	CDC42 binding protein kinase gamma (DMPK-like)	protein-coding
common_peak2-28707-14-15--0.100783839642355-0.301029995663982	chr5	34636626	34637131	+	0	NA	Intergenic	Intergenic	-5905	NM_001015039	231125	Mm.113388	NM_001015039	ENSMUSG00000037224	Zfyve28	9630058O20Rik|Gm146|mKIAA1643	zinc finger, FYVE domain containing 28	protein-coding
unique_peak1-3823-17-7-1.21829633820504-1.55050753388977	chr2	127729458	127730208	+	0	NA	intron (NM_028765, intron 8 of 17)	MTE2b|LTR|MaLR	49469	NM_028765	74121	Mm.244835	NM_028765	ENSMUSG00000027380	Acoxl	1200014P05Rik|AV025673	acyl-Coenzyme A oxidase-like	protein-coding
common_peak1-18350-40-39-0.337047587863736-0.649502410911277	chr8	69749412	69750527	+	0	NA	Intergenic	Lx6|LINE|L1	-264688	NM_008673	17960	Mm.14125	NM_008673	ENSMUSG00000025588	Nat1	Nat-1	N-acetyl transferase 1	protein-coding
common_peak2-24161-15-38--1.27323746830659-2.30508312501225	chr16	44173139	44173740	+	0	NA	promoter-TSS (NM_001029889)	promoter-TSS (NM_001029889)	-71	NM_001029889	207806	Mm.310566	NM_001029889	ENSMUSG00000068284	Gm608	5530400K22Rik|Gm1779|mKIAA2018	predicted gene 608	protein-coding
unique_peak2-37717-4-10--1.48289213249054-1.5150158574804	chr5	105109843	105110260	+	0	NA	Intergenic	L1_Mus1|LINE|L1	155297	NR_030673	100662	Mm.319836	NR_030673	ENSMUSG00000097392	D930016D06Rik	100041172|1110004B06Rik|AI451450|Gm3179	RIKEN cDNA D930016D06 gene	ncRNA
unique_peak2-34476-7-10--0.660340788339108-1.12966497611638	chr14	33310119	33310682	+	0	NA	Intergenic	AT_rich|Low_complexity|Low_complexity	-16307	NM_001081221	319955	Mm.318310	NM_177043	ENSMUSG00000054051	Ercc6	4732403I04|C130058G22Rik|CSB	excision repair cross-complementing rodent repair deficiency, complementation group 6	protein-coding
common_peak2-19618-84-123--0.0192622514978495-0.301916313394054	chr1	36456401	36458340	+	0	NA	intron (NM_001277076, intron 19 of 52)	intron (NM_001277076, intron 19 of 52)	28234	NM_001277076	100534273	Mm.389112	NM_001277076		Fer1l5	4930533C12Rik	fer-1-like 5 (C. elegans)	protein-coding
common_peak2-26046-131-176-0.237634309651597-0.916000798024435	chr2	18693856	18695064	+	0	NA	Intergenic	(GA)n|Simple_repeat|Simple_repeat	73811	NM_001001334	381350	Mm.330024	NM_001001334		BC061194	-	cDNA sequence BC061194	protein-coding
common_peak1-16459-15-17--0.157760250886656-0.307611222530528	chr5	136171656	136172332	+	0	NA	intron (NM_008898, intron 1 of 15)	ID4|SINE|ID	6910	NM_008898	18984	Mm.3863	NM_008898	ENSMUSG00000005514	Por	4933424M13Rik|CPR|CYPOR	P450 (cytochrome) oxidoreductase	protein-coding
common_peak1-16730-26-28-0.0699180970308904-0.316008636696532	chr6	30896080	30896864	+	0	NA	Intergenic	L2a|LINE|L2	12518	NM_001135093	619665	Mm.204671	NM_001135093	ENSMUSG00000073209	Klf14	5330411L03Rik|AL022736|BTEB5	Kruppel-like factor 14	protein-coding
common_peak2-25962-39-49--0.0280949428555708-0.301029995663988	chr19	53037868	53038568	+	0	NA	Intergenic	(TTTTG)n|Simple_repeat|Simple_repeat	40547	NR_030678	100043450	Mm.145594	NR_030678		AA387883	-	expressed sequence AA387883	ncRNA
common_peak2-26304-42-36-0.532875962238234-1.0880568139457	chr2	32436769	32437883	+	0	NA	intron (NM_198191, intron 9 of 9)	URR1A|DNA|MER1_type	-5272	NM_001276425	20448	Mm.27446	NM_011373	ENSMUSG00000079442	St6galnac4	SIAT7-D|ST6GalNAcIV|Siat7d	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4	protein-coding
unique_peak1-7252-9-3-1.18961340640422-1.57096726280955	chr9	78520246	78520759	+	0	NA	intron (NM_153098, intron 17 of 32)	intron (NM_153098, intron 17 of 32)	57149	NM_153098	235505	Mm.32955	NM_153098	ENSMUSG00000046186	Cd109	9930012E15Rik|AI480638|GARP	CD109 antigen	protein-coding
unique_peak2-33259-8-11--0.579740082773585-1.14218153353838	chr10	128194428	128195104	+	0	NA	intron (NM_001253704, intron 2 of 3)	intron (NM_001253704, intron 2 of 3)	9255	NM_001253704	78428	Mm.27358	NM_030100	ENSMUSG00000064030	Wibg	A030010B05Rik|Pym	within bgcn homolog (Drosophila)	protein-coding
unique_peak1-1856-10-8-0.186490343566457-1.078512453669	chr14	52315707	52316206	+	0	NA	Intergenic	RLTR14-int|LTR|ERV1	20851	NM_001034102	545047	Mm.425915	NM_001034102	ENSMUSG00000068506	Gm5800	EG545047	predicted gene 5800	protein-coding
common_peak1-15943-15-10-0.552733131918359-0.604422558181019	chr5	29388311	29388979	+	0	NA	Intergenic	L1Md_A|LINE|L1	-133888	NM_021470	56874	Mm.87352	NM_021470	ENSMUSG00000029130	Rnf32	1700009J01Rik|2700025B22Rik|4930542N22Rik|Lmbr2	ring finger protein 32	protein-coding
common_peak1-11683-9-16--0.897849434846119-0.732381977911291	chr16	30070866	30071324	+	0	NA	Intergenic	Intergenic	5652	NM_008235	15205	Mm.390859	NM_008235	ENSMUSG00000022528	Hes1	Hry|bHLHb39	hairy and enhancer of split 1 (Drosophila)	protein-coding
unique_peak1-676-22-7-1.6472841050874-2.63337704757512	chr10	72777833	72778875	+	0	NA	Intergenic	Intergenic	-228901	NR_040646	327768	Mm.417745	NR_040646		A330049N07Rik	-	RIKEN cDNA A330049N07 gene	ncRNA
unique_peak1-759-8-2-1.42025991722641-1.65811743852845	chr10	120582812	120583339	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	112015	NM_011915	24117	Mm.32831	NM_011915	ENSMUSG00000020218	Wif1	AW107799|WIF-1	Wnt inhibitory factor 1	protein-coding
common_peak2-26386-15-30--0.942031559831219-1.24110690293937	chr2	51140539	51141486	+	0	NA	intron (NR_040636, intron 1 of 2)	intron (NR_040636, intron 1 of 2)	43661	NR_040636	329404	Mm.417725	NR_040636	ENSMUSG00000086349	Gm13497	A730015I17|OTTMUSG00000012425	predicted gene 13497	ncRNA
unique_peak2-34605-4-7--1.02346051385325-1.09384600808989	chr14	73013734	73014160	+	0	NA	intron (NM_207636, intron 3 of 25)	L1Md_F3|LINE|L1	95863	NM_207636	319448	Mm.205421	NM_207636	ENSMUSG00000033487	Fndc3a	1700094E19Rik|D14Ertd453e|F730017H24Rik|Fndc3|sys	fibronectin type III domain containing 3A	protein-coding
common_peak2-29229-37-28-0.668012076358247-1.26138754964088	chr5	138194113	138195258	+	0	NA	intron (NM_029805, intron 3 of 5)	intron (NM_029805, intron 3 of 5)	7488	NM_023910	78829	Mm.286399	NM_023910	ENSMUSG00000029723	Tsc22d4	0610009M14Rik|1700023B23Rik|AI415410|Thg-1pit|Tilz2	TSC22 domain family, member 4	protein-coding
common_peak1-11119-37-64--0.496374741542636-0.943512743618327	chr15	63997279	63998207	+	0	NA	intron (NM_001276467, intron 9 of 29)	intron (NM_001276467, intron 9 of 29)	-105733	NM_144846	223601	Mm.246108	NM_144846	ENSMUSG00000022378	Fam49b	0910001A06Rik|AW122079	family with sequence similarity 49, member B	protein-coding
common_peak1-18818-17-38--1.06710588065721-1.70296806472143	chr9	4309857	4310561	+	0	NA	promoter-TSS (NM_026276)	promoter-TSS (NM_026276)	393	NM_026962	69149	Mm.25946	NM_026962	ENSMUSG00000025893	Kbtbd3	2200003A07Rik|Bklhd3	kelch repeat and BTB (POZ) domain containing 3	protein-coding
unique_peak2-37942-3-8--1.58390809140159-1.39487600375387	chr5	148563206	148563652	+	0	NA	Intergenic	CpG	-25865	NM_010228	14254	Mm.389712	NM_010228	ENSMUSG00000029648	Flt1	AI323757|Flt-1|VEGFR-1|VEGFR1|sFlt1	FMS-like tyrosine kinase 1	protein-coding
common_peak1-17025-14-16--0.188246680892695-0.308035960714963	chr6	91440866	91441553	+	0	NA	intron (NM_009531, intron 15 of 15)	intron (NM_009531, intron 15 of 15)	17464	NM_028766	74122	Mm.38801	NM_028766	ENSMUSG00000030095	Tmem43	1200015A22Rik|LUMA	transmembrane protein 43	protein-coding
common_peak2-23382-14-15--0.100783839642355-0.301029995663982	chr15	57762213	57762886	+	0	NA	intron (NM_001081396, intron 4 of 20)	intron (NM_001081396, intron 4 of 20)	18795	NM_001167679	210544	Mm.390835	NM_199300	ENSMUSG00000022364	Tbc1d31	4B3|D330013L20Rik|Gm85|Wdr67	TBC1 domain family, member 31	protein-coding
common_peak2-25010-6-6--0.241956811677302-0.947717972411649	chr18	16740819	16741202	+	0	NA	Intergenic	B3A|SINE|B2	226548	NM_007664	12558	Mm.257437	NM_007664	ENSMUSG00000024304	Cdh2	CDHN|N-cadherin|Ncad	cadherin 2	protein-coding
unique_peak1-6042-9-2-1.60465090568306-1.87199725847353	chr6	115307899	115308422	+	0	NA	Intergenic	Intergenic	-3079	NM_001127330	19016	Mm.3020	NM_011146	ENSMUSG00000000440	Pparg	Nr1c3|PPAR-gamma|PPAR-gamma2|PPARgamma|PPARgamma2	peroxisome proliferator activated receptor gamma	protein-coding
unique_peak1-5632-33-11-1.74637506180437-4.10519998339124	chr6	17051817	17053272	+	0	NA	intron (NM_207176, intron 6 of 6)	intron (NM_207176, intron 6 of 6)	37395	NM_207176	21753	Mm.436548	NM_011570	ENSMUSG00000029552	Tes	D6Ertd352e|TESS|Tes1|Tes2|testin2	testis derived transcript	protein-coding
unique_peak1-275-13-6-0.971117108580164-1.01572999746118	chr1	98038368	98038950	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-120324	NR_040467	73454	Mm.396229	NR_040467		1700063A18Rik	-	RIKEN cDNA 1700063A18 gene	ncRNA
common_peak2-25601-51-45-0.55136186954556-1.24554587181539	chr19	8837056	8838049	+	0	NA	intron (NM_001276704, intron 3 of 19)	intron (NM_001276704, intron 3 of 19)	5945	NM_001276704	53319	Mm.7271	NM_016813	ENSMUSG00000010097	Nxf1	Mex67|Mvb1|Tap	nuclear RNA export factor 1	protein-coding
common_peak2-21649-17-8-1.04837133676273-1.30305656033811	chr11	102229820	102230224	+	0	NA	Intergenic	Intergenic	-3427	NM_011403	20533	Mm.7248	NM_011403	ENSMUSG00000006574	Slc4a1	Ae1|CD233|Empb3|l11Jus51	solute carrier family 4 (anion exchanger), member 1	protein-coding
unique_peak2-37399-3-8--1.58390809140159-1.39487600375387	chr4	141425113	141425525	+	0	NA	intron (NM_025994, intron 1 of 3)	B3|SINE|B2	5516	NM_025994	27984	Mm.395598	NM_025994	ENSMUSG00000040659	Efhd2	2600015J22Rik|AA408606|D4Wsu27e	EF hand domain containing 2	protein-coding
common_peak1-15249-8-9--0.316705676939792-1.03275496310833	chr4	11966604	11967026	+	0	NA	non-coding (NR_110955, exon 29 of 29)	non-coding (NR_110955, exon 29 of 29)	48289	NM_177861	329795	Mm.475125	NM_177861	ENSMUSG00000049488	Tmem67	5330408M12Rik|B230117O07|b2b1163.1Clo|b2b1291.1Clo	transmembrane protein 67	protein-coding
common_peak1-8938-133-219--0.0498021288413524-0.319126180898854	chr11	53350183	53352259	+	0	NA	intron (NM_033144, intron 8 of 9)	intron (NM_033144, intron 8 of 9)	17983	NM_001252333	20362	Mm.274399	NM_033144	ENSMUSG00000018398	Sept8	AW046166|Sepl|mKIAA0202	septin 8	protein-coding
unique_peak1-3767-17-2-2.63333383748388-3.75443312462699	chr19	55260794	55261559	+	0	NA	intron (NM_009348, intron 4 of 9)	intron (NM_009348, intron 4 of 9)	5801	NM_009348	21684	Mm.42139	NM_009348	ENSMUSG00000024979	Tectb	Tctnb	tectorin beta	protein-coding
common_peak2-23153-8-6-0.197867495889966-1.03789460276074	chr14	120296696	120297026	+	0	NA	Intergenic	(TAAA)n|Simple_repeat|Simple_repeat	144796	NM_001001490	239283	Mm.138520	NM_001001490	ENSMUSG00000044819	Oxgr1	Cysltr3|Gm299|Gpr80|Gpr99|P2Y15	oxoglutarate (alpha-ketoglutarate) receptor 1	protein-coding
common_peak1-10867-22-10-1.18785248645011-1.74319850844462	chr15	5143745	5144677	+	0	NA	intron (NM_026213, intron 2 of 4)	intron (NM_026213, intron 2 of 4)	8651	NM_026213	67515	Mm.254979	NM_026213	ENSMUSG00000022151	Ttc33	2410099M07Rik|2900001O04Rik|AI507072|AW538342|Osrf	tetratricopeptide repeat domain 33	protein-coding
unique_peak1-6916-14-1-2.89921616035764-3.91338994363176	chr8	106269495	106270199	+	0	NA	Intergenic	Intergenic	142148	NR_045730	71058	Mm.67707	NR_045730		4933400L20Rik	-	RIKEN cDNA 4933400L20 gene	ncRNA
common_peak1-15549-33-39-0.00940946763816619-0.303778768325576	chr4	122954837	122956305	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-4583	NM_130881	230721	Mm.277091	NM_130881	ENSMUSG00000011257	Pabpc4	-	poly(A) binding protein, cytoplasmic 4	protein-coding
common_peak2-26095-17-19--0.103631756682325-0.301029995663974	chr2	180272882	180273473	+	0	NA	intron (NM_018766, intron 1 of 3)	intron (NM_018766, intron 1 of 3)	38496	NM_018766	18216	Mm.301712	NM_018766	ENSMUSG00000027568	Ntsr1	NT-1R|NTR-1|NTR1	neurotensin receptor 1	protein-coding
unique_peak1-3077-7-0-2.79909083029819-2.40823996531185	chr18	20961332	20961841	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-56681	NM_019737	56386	Mm.393827	NM_019737	ENSMUSG00000056124	B4galt6	AA536803|AU022389	UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 6	protein-coding
common_peak2-30049-10-11--0.228547155712387-0.31137425193576	chr6	128101839	128102303	+	0	NA	Intergenic	Intergenic	-8475	NM_175414	109246	Mm.21814	NM_175414	ENSMUSG00000030352	Tspan9	6720474K14Rik|9430079M16Rik|AU018597	tetraspanin 9	protein-coding
unique_peak1-2735-9-4-0.867685311516858-1.36011389749466	chr16	97643777	97644218	+	0	NA	intron (NM_019517, intron 7 of 8)	intron (NM_019517, intron 7 of 8)	40515	NM_010846	17857	Mm.33996	NM_010846	ENSMUSG00000000386	Mx1	AI893580|Mx|Mx-1	MX dynamin-like GTPase 1	protein-coding
common_peak1-9234-23-36--0.48768586111987-0.652802052802678	chr11	85140257	85140996	+	0	NA	intron (NM_016910, intron 2 of 5)	intron (NM_016910, intron 2 of 5)	15870	NM_016910	53892	Mm.45609	NM_016910	ENSMUSG00000020525	Ppm1d	AV338790|Wip1	protein phosphatase 1D magnesium-dependent, delta isoform	protein-coding
common_peak2-24380-9-16--0.897849434846119-0.732381977911291	chr17	12118612	12119110	+	0	NA	intron (NM_016694, intron 9 of 11)	intron (NM_016694, intron 9 of 11)	-42806	NR_045808	52027	Mm.442257	NR_045808		D17Ertd648e	-	DNA segment, Chr 17, ERATO Doi 648, expressed	ncRNA
unique_peak1-1823-10-3-1.35641534500877-1.75805390616669	chr14	33331355	33331849	+	0	NA	intron (NM_001081221, intron 2 of 20)	intron (NM_001081221, intron 2 of 20)	4895	NM_001081221	319955	Mm.318310	NM_177043	ENSMUSG00000054051	Ercc6	4732403I04|C130058G22Rik|CSB	excision repair cross-complementing rodent repair deficiency, complementation group 6	protein-coding
common_peak1-12631-76-111--0.0454105361943222-0.304978181701406	chr18	34506176	34507852	+	0	NA	intron (NM_007874, intron 4 of 4)	intron (NM_007874, intron 4 of 4)	16215	NM_025527	66384	Mm.29452	NM_025527	ENSMUSG00000014504	Srp19	2310020D23Rik	signal recognition particle 19	protein-coding
common_peak1-15066-40-39-0.337047587863736-0.649502410911277	chr3	126384143	126385362	+	0	NA	intron (NM_023813, intron 2 of 17)	intron (NM_023813, intron 2 of 17)	84883	NM_023813	108058	Mm.255822	NM_023813	ENSMUSG00000053819	Camk2d	2810011D23Rik|8030469K03Rik|CaMK II|[d]-CaMKII	calcium/calmodulin-dependent protein kinase II, delta	protein-coding
common_peak2-20268-30-31-0.169675409491873-0.382130460680153	chr1	189921506	189922400	+	0	NA	intron (NM_011935, intron 3 of 6)	(CA)n|Simple_repeat|Simple_repeat	-89084	NR_038007	320272	Mm.446274	NR_038007		9330162B11Rik	-	RIKEN cDNA 9330162B11 gene	ncRNA
unique_peak1-5660-10-2-1.77145284428761-2.09384600808989	chr6	30461089	30461503	+	0	NA	promoter-TSS (NM_029373)	promoter-TSS (NM_029373)	-990	NM_029373	75647	Mm.46117	NM_027073	ENSMUSG00000029784	Ssmem1	1700016K02Rik|1700025E21Rik	serine-rich single-pass membrane protein 1	protein-coding
common_peak2-29706-6-6--0.241956811677302-0.947717972411649	chr6	83121756	83122169	+	0	NA	intron (NM_001198866, intron 1 of 31)	B1F1|SINE|Alu	6044	NM_001198867	13191	Mm.6919	NM_007835	ENSMUSG00000031865	Dctn1	AL022633|Glued|p150|p150<glued>	dynactin 1	protein-coding
common_peak2-24582-22-32--0.397110014271049-0.488172498216822	chr17	31563555	31564448	+	0	NA	intron (NM_008804, intron 4 of 18)	intron (NM_008804, intron 4 of 18)	40822	NM_001163748	18585	Mm.10812	NM_008804	ENSMUSG00000041119	Pde9a	PDE9A1	phosphodiesterase 9A	protein-coding
unique_peak2-38089-4-11--1.6084230145744-1.68134727924692	chr6	54867150	54867884	+	0	NA	Intergenic	Intergenic	54138	NM_001171007	107607	Mm.28498	NM_172729	ENSMUSG00000038058	Nod1	C230079P11|Card4|F830007N14Rik|Nlrc1	nucleotide-binding oligomerization domain containing 1	protein-coding
common_peak2-24461-19-12-0.702247608520594-0.840839978588874	chr17	23997596	23998168	+	0	NA	Intergenic	Intergenic	7143	NM_027220	69814	Mm.244143	NM_027220	ENSMUSG00000048992	Prss32	2010001P08Rik|mT5|tryptase-5	protease, serine 32	protein-coding
common_peak2-30531-33-31-0.331337562525529-0.549429090733244	chr7	66591446	66592631	+	0	NA	Intergenic	Intergenic	-12519	NR_015479	330544	Mm.9002	NR_015479		C230091D08Rik	-	RIKEN cDNA C230091D08 gene	ncRNA
unique_peak2-39321-8-10--0.454209200689727-1.078512453669	chr8	125344063	125344511	+	0	NA	Intergenic	Intergenic	-27987	NM_007662	12555	Mm.1976	NM_007662	ENSMUSG00000031962	Cdh15	AI323380|Cdh14|Mcad	cadherin 15	protein-coding
common_peak2-23460-73-103--0.00804471171587018-0.301029995663957	chr15	68257722	68259467	+	0	NA	Intergenic	Intergenic	-85743	NR_029718	387228		NR_029718	miRBase:MI0000549	Mir30d	Mirn30d|mmu-mir-30d	microRNA 30d	ncRNA
unique_peak2-37019-4-11--1.6084230145744-1.68134727924692	chr3	126570887	126571421	+	0	NA	Intergenic	L1_Mur3|LINE|L1	75150	NM_001034168	109676	Mm.220242	NM_178655	ENSMUSG00000032826	Ank2	AI835472|AW491075|Ank-2	ankyrin 2, brain	protein-coding
unique_peak1-2701-7-1-1.79909083029819-1.80617997398389	chr16	87783768	87784183	+	0	NA	Intergenic	Intergenic	84776	NM_007520	12013	Mm.26147	NM_007520	ENSMUSG00000025612	Bach1	6230421P05Rik|AI323795	BTB and CNC homology 1	protein-coding
common_peak1-9102-29-46--0.442298771062527-0.626414924887874	chr11	70653500	70654680	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-4173	NM_001291143	54189	Mm.7087	NM_019400	ENSMUSG00000020817	Rabep1	Rab5ep|rabaptin-5|rabaptin-5alpha	rabaptin, RAB GTPase binding effector protein 1	protein-coding
unique_peak1-476-8-4-0.683294323060208-1.21878474469819	chr1	177014069	177014592	+	0	NA	intron (NM_001199003, intron 13 of 17)	B1_Mur1|SINE|Alu	-162380	NM_011825	23893	Mm.25760	NM_011825	ENSMUSG00000050069	Grem2	Gremlin2|Prdc	gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis)	protein-coding
common_peak2-25370-18-12-0.612479433087259-0.739965416525508	chr18	82738232	82738772	+	0	NA	intron (NM_001025256, intron 2 of 5)	intron (NM_001025256, intron 2 of 5)	14602	NM_001025254	17196	Mm.252063	NM_010777	ENSMUSG00000041607	Mbp	C76307|Hmbpr|R75289|golli-mbp|mld|shi	myelin basic protein	protein-coding
common_peak1-10078-40-52--0.0689447718121006-0.303138254425616	chr13	23554359	23555978	+	0	NA	intron (NM_013483, intron 3 of 7)	(TA)n|Simple_repeat|Simple_repeat	2602	NM_013483	12231	Mm.1420	NM_013483	ENSMUSG00000000706	Btn1a1	Btn	butyrophilin, subfamily 1, member A1	protein-coding
unique_peak1-907-9-1-2.18961340640422-2.31132995230379	chr11	41633031	41633681	+	0	NA	Intergenic	Intergenic	180860	NM_177408	14406	Mm.5309	NM_008073	ENSMUSG00000020436	Gabrg2	GABAA-R|Gabrg-2|gamma2	gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	protein-coding
common_peak2-28177-33-76--0.935448978169372-2.76761540882188	chr4	109656869	109658002	+	0	NA	Intergenic	Intergenic	6805	NM_172296	242620	Mm.32825	NM_172296	ENSMUSG00000047143	Dmrta2	Dmrt5	doublesex and mab-3 related transcription factor like family A2	protein-coding
unique_peak1-297-9-2-1.60465090568306-1.87199725847353	chr1	125514872	125515397	+	0	NA	intron (NM_199021, intron 5 of 25)	RMER6C|LTR|ERVK	427002	NM_199021	269109	Mm.483255	NM_199021	ENSMUSG00000036815	Dpp10	6430601K09Rik|DPP X|Dprp3	dipeptidylpeptidase 10	protein-coding
common_peak2-27320-27-7-1.99154595089524-4.07016573886257	chr3	65825423	65825849	+	0	NA	Intergenic	Intergenic	-63489	NM_019937	56706	Mm.175612	NM_019937	ENSMUSG00000027829	Ccnl1	2610030E23Rik|AU018493|Ccnl|ania-6a	cyclin L1	protein-coding
common_peak2-31135-16-11-0.533301141546906-0.58239619684445	chr8	34814832	34815414	+	0	NA	Intergenic	ERVL-B4-int|LTR|ERVL	-27263	NM_001167921	68153	Mm.286104	NM_026584	ENSMUSG00000031585	Gtf2e2	34kDa|AI462509|C330006J08Rik	general transcription factor II E, polypeptide 2 (beta subunit)	protein-coding
common_peak1-9651-14-10-0.439784541720347-0.519648556297791	chr12	87408240	87408776	+	0	NA	intron (NM_009368, intron 3 of 6)	intron (NM_009368, intron 3 of 6)	11483	NM_009368	21809	Mm.3992	NM_009368	ENSMUSG00000021253	Tgfb3	Tgfb-3	transforming growth factor, beta 3	protein-coding
unique_peak1-842-10-2-1.77145284428761-2.09384600808989	chr11	11942517	11943043	+	0	NA	Intergenic	Intergenic	-5357	NM_010345	14783	Mm.273117	NM_010345	ENSMUSG00000020176	Grb10	5730571D09Rik|AI325020|Meg1|mKIAA0207	growth factor receptor bound protein 10	protein-coding
unique_peak1-6853-11-1-2.50869358425161-2.83420869758413	chr8	84790374	84790867	+	0	NA	Intergenic	Intergenic	135865	NM_001254747	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak1-11844-17-8-1.04837133676273-1.30305656033811	chr16	88539361	88540110	+	0	NA	Intergenic	L1_Mus3|LINE|L1	23693	NM_018778	54420	Mm.25836	NM_018778	ENSMUSG00000050520	Cldn8	AI648025	claudin 8	protein-coding
common_peak2-31765-20-26--0.266812717572275-0.373496418836697	chr9	21546884	21547719	+	0	NA	intron (NM_010700, intron 12 of 17)	intron (NM_010700, intron 12 of 17)	17429	NM_026282	67629	Mm.295642	NM_026282	ENSMUSG00000074476	Spc24	2410030K01Rik|AV109292|Spbc24	SPC24, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
unique_peak1-6960-7-1-1.79909083029819-1.80617997398389	chr8	113530117	113530640	+	0	NA	3' UTR (NM_001190800, exon 12 of 12)	3' UTR (NM_001190800, exon 12 of 12)	-8655	NM_007916	13680	Mm.287901	NM_007916	ENSMUSG00000015023	Ddx19a	DBP5|Ddx19|Eif4a-rs1	DEAD (Asp-Glu-Ala-Asp) box polypeptide 19a	protein-coding
unique_peak1-2033-8-3-1.00522241794757-1.39487600375387	chr15	25343230	25343734	+	0	NA	promoter-TSS (NM_027395)	promoter-TSS (NM_027395)	37	NM_027395	70350	Mm.29586	NM_027395	ENSMUSG00000045763	Basp1	2610024P12Rik|CAP-23|CAP23|Ckap3|NAP-22|NAP22	brain abundant, membrane attached signal protein 1	protein-coding
unique_peak1-3437-11-6-0.701338662194009-1.32595962126035	chr19	6631914	6632510	+	0	NA	Intergenic	ORR1B1|LTR|MaLR	-89142	NM_009203	20521	Mm.391146	NM_009203	ENSMUSG00000061742	Slc22a12	AI987855|OAT4L|Rst|Slc22al2|URAT1	solute carrier family 22 (organic anion/cation transporter), member 12	protein-coding
unique_peak1-5517-6-4-0.24347001549294-0.989110657569874	chr5	137779063	137779587	+	0	NA	Intergenic	Intergenic	-4515	NM_031406	83704	Mm.235625	NM_031406	ENSMUSG00000037344	Slc12a9	CIP1	solute carrier family 12 (potassium/chloride transporters), member 9	protein-coding
unique_peak2-38697-9-13--0.617741515653384-0.459837087125828	chr7	104244386	104245017	+	0	NA	intron (NM_010248, intron 1 of 9)	L1Md_F3|LINE|L1	14440	NM_010248	14389	Mm.42033	NM_010248	ENSMUSG00000004508	Gab2	AI463667|D130058I17Rik|p97	growth factor receptor bound protein 2-associated protein 2	protein-coding
common_peak2-22731-13-11-0.193509529916613-0.379391706698377	chr13	108229483	108230164	+	0	NA	Intergenic	Intergenic	-30079	NR_045083	105120	Mm.417700	NR_045083		AI197445	-	expressed sequence AI197445	ncRNA
common_peak2-31171-22-45--0.876277850969609-1.55933022783608	chr8	46210295	46211141	+	0	NA	Intergenic	Intergenic	39781	NR_040690	622523	Mm.390032	NR_040690		Gm6329	EG622523	predicted gene 6329	ncRNA
common_peak1-18363-29-31-0.112290080615111-0.353704024845522	chr8	70282982	70283859	+	0	NA	intron (NM_177698, intron 9 of 14)	Lx7|LINE|L1	58774	NM_027626	234353	Mm.32525	NM_027626	ENSMUSG00000030465	Psd3	4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D	pleckstrin and Sec7 domain containing 3	protein-coding
common_peak2-22726-32-43--0.180339599417637-0.343417008601348	chr13	107021606	107023078	+	0	NA	Intergenic	Intergenic	704653	NM_029665	76582	Mm.132208	NM_029665	ENSMUSG00000042590	Ipo11	1700081H05Rik|2510001A17Rik|AI314624|AW555235|E330021B14Rik|Ranbp11	importin 11	protein-coding
common_peak1-7852-16-11-0.533301141546906-0.58239619684445	chr1	132298418	132299280	+	0	NA	intron (NM_007827, intron 9 of 9)	L1Md_F3|LINE|L1	20727	NM_007827	13137	Mm.436759	NM_007827	ENSMUSG00000026401	Daf2	AI323748|Cd55b|Daf|Daf-TM|TM-DAF	decay accelerating factor 2	protein-coding
common_peak1-16697-19-16-0.315224485411347-0.448200956659575	chr6	17354063	17355085	+	0	NA	Intergenic	Intergenic	-59383	NM_008591	17295	Mm.86844	NM_008591	ENSMUSG00000009376	Met	AI838057|HGF|HGFR|Par4|c-Met	met proto-oncogene	protein-coding
common_peak2-31529-11-15--0.491306415748387-0.435191258261915	chr8	109961554	109962297	+	0	NA	intron (NM_025830, intron 1 of 23)	L2c|LINE|L2	1627	NM_025830	66894	Mm.390058	NM_025830	ENSMUSG00000031930	Wwp2	1300010O06Rik|AA690238|AIP2|AW554328	WW domain containing E3 ubiquitin protein ligase 2	protein-coding
unique_peak1-3752-10-2-1.77145284428761-2.09384600808989	chr19	53433878	53434275	+	0	NA	intron (NM_010847, intron 3 of 5)	intron (NM_010847, intron 3 of 5)	29140	NM_001008543	17859	Mm.2154	NM_010847	ENSMUSG00000025025	Mxi1	ENSMUSG00000067085|Gm10197|Mad2|bHLHc11	Max interacting protein 1	protein-coding
common_peak1-7633-31-14-1.3183480752046-2.63673708350641	chr1	64756257	64757283	+	0	NA	intron (NM_001097644, intron 4 of 9)	intron (NM_001097644, intron 4 of 9)	18851	NM_001097644	227210	Mm.39706	NM_001097644	ENSMUSG00000070871	Ccnyl1	9630037P07Rik|AW554339	cyclin Y-like 1	protein-coding
unique_peak2-38812-5-18--1.95230784944944-1.99473478107052	chr7	134186027	134186978	+	0	NA	promoter-TSS (NM_145588)	promoter-TSS (NM_145588)	-568	NM_145588	110033	Mm.286488	NM_145588	ENSMUSG00000030677	Kif22	AU021460|C81217|Kid|Kif22a	kinesin family member 22	protein-coding
unique_peak1-3099-11-1-2.50869358425161-2.83420869758413	chr18	25682193	25682656	+	0	NA	intron (NM_001146293, intron 3 of 12)	intron (NM_001146293, intron 3 of 12)	230060	NM_133195	108013	Mm.266435	NM_133195	ENSMUSG00000024268	Celf4	A230070D14Rik|BRUNOL-4|Brul4|Brunol4|C130060B05Rik	CUGBP, Elav-like family member 4	protein-coding
common_peak1-8546-15-13-0.204809828498052-0.368541233333383	chr10	93325906	93326490	+	0	NA	intron (NM_019648, intron 9 of 11)	intron (NM_019648, intron 9 of 11)	27749	NM_019648	56307	Mm.289329	NM_019648	ENSMUSG00000036112	Metap2	4930584B20Rik|A930035J23Rik|AI047573|AL024412|AU014659|Amp2|Mnpep|p67|p67eIF2	methionine aminopeptidase 2	protein-coding
unique_peak1-4644-14-2-2.31425365963649-3.28500101358144	chr3	88496647	88497296	+	0	NA	intron (NM_028814, intron 4 of 13)	intron (NM_028814, intron 4 of 13)	7255	NM_028814	74200	Mm.251800	NM_028814	ENSMUSG00000028060	2810403A07Rik	A430106P18Rik|AI256352|AI451678|Blom7|Kiaa0907	RIKEN cDNA 2810403A07 gene	protein-coding
common_peak1-13042-21-23--0.0154732354549205-0.305650498375555	chr19	5749503	5750581	+	0	NA	intron (NM_008520, intron 12 of 27)	intron (NM_008520, intron 12 of 27)	9138	NM_008520	16998	Mm.182396	NM_008520	ENSMUSG00000024940	Ltbp3	Ltbp2|mFLJ00070	latent transforming growth factor beta binding protein 3	protein-coding
common_peak1-13831-32-20-0.886774596440899-1.65365064026544	chr2	59171017	59172151	+	0	NA	intron (NM_175464, intron 11 of 20)	intron (NM_175464, intron 11 of 20)	53155	NR_040510	76676	Mm.110038	NR_040510	ENSMUSG00000087455	5330411J11Rik	-	RIKEN cDNA 5330411J11 gene	ncRNA
unique_peak2-39421-6-9--0.75652998450706-1.11707584880836	chr9	41735663	41736139	+	0	NA	Intergenic	Intergenic	196471	NM_011436	20660	Mm.121920	NM_011436		Sorl1	2900010L19Rik|AI596264|AW261561|LR11|SorLA|gp250|mSorLA	sortilin-related receptor, LDLR class A repeats-containing	protein-coding
unique_peak1-6506-9-3-1.18961340640422-1.57096726280955	chr7	116286454	116286907	+	0	NA	intron (NM_057173, intron 2 of 3)	intron (NM_057173, intron 2 of 3)	27142	NM_057173	109594	Mm.360145	NM_057173	ENSMUSG00000036111	Lmo1	Rbtn-1|Rbtn1|Ttg1	LIM domain only 1	protein-coding
unique_peak2-38297-4-6--0.830815435910851-0.989110657569874	chr6	135296159	135296626	+	0	NA	Intergenic	MIRb|SINE|MIR	-16557	NM_010128	13730	Mm.182785	NM_010128	ENSMUSG00000030208	Emp1	I-8-09|TMP	epithelial membrane protein 1	protein-coding
common_peak1-8936-11-9-0.186765489364251-0.344532117358383	chr11	53307595	53308089	+	0	NA	Intergenic	Intergenic	-14145	NM_183173	237761	Mm.145208	NM_183173	ENSMUSG00000044352	Sowaha	A830006N08Rik|Ankrd43	sosondowah ankyrin repeat domain family member A	protein-coding
unique_peak2-37266-5-6--0.511735258063458-0.947717972411649	chr4	108887193	108887628	+	0	NA	Intergenic	Intergenic	-3608	NM_001285895	108802	Mm.318248	NM_001033226	ENSMUSG00000028558	Calr4	4933403L16Rik|AU017583	calreticulin 4	protein-coding
unique_peak2-36743-9-10--0.269818212233077-1.05503135781948	chr3	58373831	58374387	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	-6471	NM_001040396	69227	Mm.270950	NM_001040396	ENSMUSG00000075700	Selt	2810407C02Rik|5730408P04Rik	selenoprotein T	protein-coding
unique_peak1-681-12-5-1.06381348436648-1.78669045979184	chr10	76537015	76537685	+	0	NA	intron (NM_001109991, intron 14 of 40)	AT_rich|Low_complexity|Low_complexity	39100	NM_001109991	12822	Mm.4352	NM_009929	ENSMUSG00000001435	Col18a1	-	collagen, type XVIII, alpha 1	protein-coding
common_peak2-30732-17-11-0.633333837483882-0.769930178837768	chr7	116200943	116201525	+	0	NA	intron (NM_001038624, intron 2 of 5)	intron (NM_001038624, intron 2 of 5)	25604	NM_001038624	320360	Mm.71007	NM_178780	ENSMUSG00000048330	Ric3	E130307J04Rik	resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	protein-coding
unique_peak2-39795-15-31--0.987835249444344-1.35897270024963	chrX	15474695	15475604	+	0	NA	Intergenic	L1_Mus2|LINE|L1	-624849	NM_025738	66742	Mm.45302	NM_025738	ENSMUSG00000023257	Cypt1	4931420D14Rik|Ckt1r3|Cypt5|Cypt6|TISP55	cysteine-rich perinuclear theca 1	protein-coding
unique_peak2-37885-4-5--0.608423014574403-0.909929411522249	chr5	139794060	139794467	+	0	NA	intron (NM_172723, intron 1 of 10)	intron (NM_172723, intron 1 of 10)	7155	NM_172723	231821	Mm.297819	NM_172723	ENSMUSG00000056413	Adap1	4930431P11Rik|Centa1|GC1L|p42IP4	ArfGAP with dual PH domains 1	protein-coding
unique_peak1-1045-9-6-0.382258484346616-1.11707584880836	chr11	77787740	77788332	+	0	NA	exon (NM_021286, exon 10 of 17)	exon (NM_021286, exon 10 of 17)	-8282	NM_174852	268448	Mm.274329	NM_174852	ENSMUSG00000037791	Phf12	2410142K10Rik|F630045O13|PF1|mKIAA1523	PHD finger protein 12	protein-coding
common_peak2-21945-6-7--0.434601889619698-0.97990265578305	chr12	31271229	31271589	+	0	NA	intron (NM_172049, intron 2 of 4)	intron (NM_172049, intron 2 of 4)	2101	NM_172049	211986	Mm.34035	NM_172049	ENSMUSG00000043061	Tmem18	BC024093	transmembrane protein 18	protein-coding
unique_peak2-35258-11-44--1.98315951207806-4.90496913713224	chr17	25984888	25985951	+	0	NA	intron (NM_001163766, intron 32 of 40)	intron (NM_001163766, intron 32 of 40)	-3623	NM_145999	214952	Mm.40907	NM_145999	ENSMUSG00000025733	Rhot2	Arht2|Miro2	ras homolog gene family, member T2	protein-coding
unique_peak1-6620-10-3-1.35641534500877-1.75805390616669	chr8	4826207	4826779	+	0	NA	Intergenic	RMER6C|LTR|ERVK	-46959	NM_011369	20419	Mm.37801	NM_011369	ENSMUSG00000022322	Shcbp1	mPAL	Shc SH2-domain binding protein 1	protein-coding
common_peak1-15192-135-253--0.231199283731704-0.935536834780224	chr3	157946398	157948204	+	0	NA	intron (NM_001291453, intron 8 of 25)	intron (NM_001291453, intron 8 of 25)	247655	NM_001289524	67144	Mm.358704	NM_024194	ENSMUSG00000063052	Lrrc40	2610040E16Rik|AI837674	leucine rich repeat containing 40	protein-coding
common_peak1-13469-42-51-0.0418896097260921-0.319645149473567	chr2	23067333	23068930	+	0	NA	intron (NM_027635, intron 2 of 10)	intron (NM_027635, intron 2 of 10)	5135	NM_027635	70981	Mm.314026	NM_027635	ENSMUSG00000026774	4931423N10Rik	-	RIKEN cDNA 4931423N10 gene	protein-coding
unique_peak1-3298-12-11-0.0638134843664826-0.337263207250336	chr18	75464833	75465584	+	0	NA	Intergenic	Intergenic	-8225	NR_045393	100503117	Mm.250517	NR_045393		2010010A06Rik	5033420E22Rik	RIKEN cDNA 2010010A06 gene	ncRNA
unique_peak1-3574-8-0-3.00522241794757-2.70926996097583	chr19	28916584	28917093	+	0	NA	intron (NM_009199, intron 1 of 11)	MTB|LTR|MaLR	7182	NM_009199	20510	Mm.246670	NM_009199	ENSMUSG00000024935	Slc1a1	D130048G10Rik|EAAC1|EAAC2|EAAT3|MEAAC1	solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1	protein-coding
common_peak1-8609-9-14--0.717277189204299-0.53895475198017	chr10	115817051	115817576	+	0	NA	intron (NM_029928, intron 30 of 31)	intron (NM_029928, intron 30 of 31)	-37864	NR_028107	67342	Mm.245800	NM_026098	ENSMUSG00000020164	Kcnmb4os1	1700058G18Rik	potassium large conductance calcium-activated channel, subfamily M, beta member 4, opposite strand 1	ncRNA
common_peak1-13165-21-37--0.67843824817735-0.907273387067392	chr19	10948336	10949225	+	0	NA	exon (NM_134142, exon 2 of 4)	exon (NM_134142, exon 2 of 4)	-4511	NM_133804	98170	Mm.490254	NM_133804	ENSMUSG00000024736	Tmem132a	6720481D13Rik|Hspa5bp1|Orai1|R74613	transmembrane protein 132A	protein-coding
common_peak2-30212-33-33-0.24387472127519-0.447010559430123	chr7	120635199	120636025	+	0	NA	Intergenic	Intergenic	-21736	NM_001285831	67420	Mm.206919	NM_026143	ENSMUSG00000030759	Far1	2600011M19Rik|2900034E22Rik|3732409C05Rik|AI850429|Mlstd2	fatty acyl CoA reductase 1	protein-coding
unique_peak2-32615-7-15--1.20090916970181-0.947446088118041	chr1	105993408	105994076	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-671654	NM_011800	23836	Mm.103640	NM_011800	ENSMUSG00000050840	Cdh20	Cdh7	cadherin 20	protein-coding
common_peak1-13522-38-39-0.249524564411168-0.503563708672202	chr2	140066144	140066939	+	0	NA	intron (NM_001033296, intron 18 of 19)	intron (NM_001033296, intron 18 of 19)	70159	NM_027093	69487	Mm.287921	NM_027093		Ndufaf5	2310003L22Rik	NADH dehydrogenase (ubiquinone) complex I, assembly factor 5	protein-coding
unique_peak1-5852-9-6-0.382258484346616-1.11707584880836	chr6	83017110	83017653	+	0	NA	TTS (NM_033606)	TTS (NM_033606)	2838	NM_009392	21909	Mm.37	NM_009392	ENSMUSG00000068327	Tlx2	Enx|Hox11L.1|Hox11l1|NCX|Ncx1|Tlx1l1|Tlx1l2	T cell leukemia, homeobox 2	protein-coding
unique_peak2-38778-15-27--0.795190171501948-0.918917574080418	chr7	127840628	127841609	+	0	NA	intron (NM_001164580, intron 1 of 2)	intron (NM_001164580, intron 1 of 2)	19984	NM_001164580	233812	Mm.276479	NM_001164580	ENSMUSG00000046096	BC030336	-	cDNA sequence BC030336	protein-coding
common_peak2-30202-25-28-0.00386891021753399-0.304839791830758	chr7	65470087	65471184	+	0	NA	Intergenic	Lx6|LINE|L1	-442937	NM_009728	11982	Mm.135129	NM_009728	ENSMUSG00000025324	Atp10a	Atp10c|pfatp	ATPase, class V, type 10A	protein-coding
common_peak2-19652-60-48-0.739582017505323-2.25460892158572	chr1	45794675	45795950	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-57034	NM_028599	73674	Mm.270376	NM_028599	ENSMUSG00000025995	Wdr75	1300003A18Rik|2410118I19Rik|C77608	WD repeat domain 75	protein-coding
common_peak2-27631-9-14--0.717277189204299-0.53895475198017	chr3	105959519	105960292	+	0	NA	intron (NM_009892, intron 5 of 10)	intron (NM_009892, intron 5 of 10)	10577	NM_009892	12655	Mm.387173	NM_009892	ENSMUSG00000040809	Chil3	AI505981|Chi3l3|ECF-L|Ym1	chitinase-like 3	protein-coding
common_peak2-20669-35-32-0.386976139104051-0.652627812244279	chr10	84917257	84918135	+	0	NA	intron (NM_028709, intron 1 of 16)	HAL1-3A_ME|LINE|L1	68137	NM_028709	74007	Mm.36544	NM_028709	ENSMUSG00000020042	Btbd11	6330404E16Rik	BTB (POZ) domain containing 11	protein-coding
unique_peak2-37424-2-13--2.72480917832092-2.79529063155376	chr4	149586458	149586972	+	0	NA	Intergenic	RLTR20B1|LTR|ERVK	-11471	NM_009802	12353	Mm.232523	NM_009802	ENSMUSG00000028972	Car6	Ca6|DOC1	carbonic anhydrase 6	protein-coding
unique_peak1-5067-14-5-1.31425365963649-1.4372489031793	chr4	139230412	139231218	+	0	NA	Intergenic	Intergenic	21362	NM_031873	83770	Mm.190612	NM_031873	ENSMUSG00000028738	Tas1r2	Gpr71|T1r2|TR2	taste receptor, type 1, member 2	protein-coding
unique_peak1-6438-11-0-3.50869358425161-3.61235994796777	chr7	98671075	98671585	+	0	NA	intron (NM_011807, intron 2 of 22)	L1MA8|LINE|L1	432034	NM_011807	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
unique_peak1-7343-12-3-1.64877598508764-2.36932189928148	chrX	7740884	7741444	+	0	NA	intron (NM_172478, intron 3 of 5)	B1_Mm|SINE|Alu	12143	NM_001166437	209815	Mm.122963	NM_172478	ENSMUSG00000039201	Tbc1d25	6330576A08Rik|A530047E07|DXHXS7927e|Oatl1|mMg81	TBC1 domain family, member 25	protein-coding
common_peak1-15837-238-415-0.0437648235740031-0.351459866776033	chr5	142818103	142823895	+	0	NA	Intergenic	Intergenic	-56452	NM_199068	17425	Mm.24214	NM_010812	ENSMUSG00000056493	Foxk1	A630048H08Rik|AI463295|ENSMUSG00000075577|Gm10868|Mnf	forkhead box K1	protein-coding
unique_peak1-7296-22-7-1.6472841050874-2.63337704757512	chr9	110281149	110281422	+	0	NA	exon (NM_001001144, exon 12 of 23)	exon (NM_001001144, exon 12 of 23)	29429	NM_001081043	104831	Mm.335477	NM_001081043	ENSMUSG00000036057	Ptpn23	AI462446|PTP-TD14	protein tyrosine phosphatase, non-receptor type 23	protein-coding
common_peak2-26335-19-17-0.232762325219374-0.392630012299441	chr2	34870987	34871814	+	0	NA	intron (NM_010406, intron 22 of 40)	Lx8|LINE|L1	45561	NM_010406	15139	Mm.2168	NM_010406	ENSMUSG00000026874	Hc	C5|C5a|He	hemolytic complement	protein-coding
common_peak1-14028-29-31-0.112290080615111-0.353704024845522	chr2	115581069	115582034	+	0	NA	intron (NM_207264, intron 10 of 10)	intron (NM_207264, intron 10 of 10)	117090	NR_035476	100316703		NR_035476		Mir1951	mmu-mir-1951	microRNA 1951	ncRNA
common_peak2-29775-16-12-0.417823924126969-0.489164546851866	chr6	88074644	88075323	+	0	NA	Intergenic	Intergenic	-20731	NR_105795	102465196		NR_105795	miRBase:MI0021905	Mir6376	mmu-mir-6376	microRNA mir-6376	ncRNA
unique_peak2-37545-5-13--1.51173525806346-1.78669045979184	chr5	30949521	30950046	+	0	NA	promoter-TSS (NM_175675)	promoter-TSS (NM_175675)	-526	NR_049199	100885838		NR_049199	miRBase:MI0019194	Mir5625	mmu-mir-5625	microRNA mir-5625	ncRNA
unique_peak2-38084-9-9--0.132314688483142-1.03275496310833	chr6	54068020	54068601	+	0	NA	intron (NM_001163640, intron 1 of 12)	MLT1K|LTR|MaLR	78384	NM_001163640	69993	Mm.321147	NM_023543	ENSMUSG00000004633	Chn2	1700026N20Rik|4930557O16Rik|ARHGAP3|Bch	chimerin 2	protein-coding
common_peak1-8605-35-56--0.401519755702237-0.672788403510108	chr10	115314745	115315868	+	0	NA	Intergenic	Intergenic	60966	NM_001168679	216350	Mm.22270	NM_146010	ENSMUSG00000034127	Tspan8	C76990|E330007O21Rik|Tm4sf3	tetraspanin 8	protein-coding
unique_peak1-2297-8-3-1.00522241794757-1.39487600375387	chr15	80914862	80915354	+	0	NA	intron (NM_001082536, intron 2 of 13)	intron (NM_001082536, intron 2 of 13)	20369	NM_153049	223701	Mm.439814	NM_153049	ENSMUSG00000042292	Mkl1	AMKL|Bsac|Mal|Mrtf-A	MKL (megakaryoblastic leukemia)/myocardin-like 1	protein-coding
common_peak2-23022-16-16-0.0308008010177225-0.307611222530525	chr14	64441299	64441927	+	0	NA	Intergenic	Intergenic	-37536	NM_028228	72400	Mm.379214	NM_028228	ENSMUSG00000021958	Pinx1	2210403I16Rik|2610028A01Rik|67-11-3|AU024023|LPTS|LPTS1	PIN2/TERF1 interacting, telomerase inhibitor 1	protein-coding
common_peak2-29602-9-9--0.132314688483142-1.03275496310833	chr6	51545320	51545741	+	0	NA	Intergenic	Intergenic	51008	NM_001127348	71982	Mm.294166	NM_028035	ENSMUSG00000038301	Snx10	2410004M09Rik	sorting nexin 10	protein-coding
common_peak1-18854-17-16-0.130833496954699-0.356936432242225	chr9	20887679	20888366	+	0	NA	intron (NR_038081, intron 3 of 16)	intron (NR_038081, intron 3 of 16)	-7990	NR_106050	102465656		NR_106050		Mir7082	mmu-mir-7082	microRNA mir-7082	ncRNA
common_peak1-9445-14-17--0.270708841084668-0.328191099940267	chr11	102697203	102698008	+	0	NA	promoter-TSS (NM_080846)	promoter-TSS (NM_080846)	-5	NM_080846	75689	Mm.44408	NM_080846	ENSMUSG00000020928	Higd1b	2310056K19Rik	HIG1 domain family, member 1B	protein-coding
common_peak2-24182-13-17--0.391452970804544-0.364171515310935	chr16	52031627	52032346	+	0	NA	intron (NM_001033238, intron 1 of 17)	CpG	324	NM_001033238	208650	Mm.328206	NM_001033238	ENSMUSG00000022637	Cblb	AI429560|AI851073|Cbl-b	Casitas B-lineage lymphoma b	protein-coding
common_peak2-23555-6-7--0.434601889619698-0.97990265578305	chr15	79299402	79299913	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	-27170	NM_013767	27373	Mm.30199	NM_013767	ENSMUSG00000022433	Csnk1e	AI426939|AI551861|AW457082|CK1epsilon|CKIe|KC1epsilon|tau	casein kinase 1, epsilon	protein-coding
unique_peak2-35992-8-14--0.901668177660948-0.660903317613906	chr19	32210127	32210881	+	0	NA	intron (NM_144792, intron 7 of 9)	L1MC4|LINE|L1	-32874	NM_018830	54447	Mm.491229	NM_018830	ENSMUSG00000024887	Asah2	AI585898	N-acylsphingosine amidohydrolase 2	protein-coding
unique_peak1-4661-8-0-3.00522241794757-2.70926996097583	chr3	90655667	90656184	+	0	NA	Intergenic	L1VL4|LINE|L1	125097	NM_207263	384997	Mm.316644	NM_207263	ENSMUSG00000042250	Pglyrp4	Gm1478|Gm413	peptidoglycan recognition protein 4	protein-coding
unique_peak2-36635-9-17--0.980311595038092-0.844317084070804	chr3	7501229	7501914	+	0	NA	Intergenic	RMER1B|Other|Other	-1855	NM_173181	67306	Mm.332366	NM_173181	ENSMUSG00000043542	Zc2hc1a	3110050N22Rik|AI790358|AU023959|Fam164a	zinc finger, C2HC-type containing 1A	protein-coding
unique_peak1-6515-9-6-0.382258484346616-1.11707584880836	chr7	118251668	118252188	+	0	NA	Intergenic	Intergenic	14261	NR_015573	75479	Mm.381620	NR_015573		1700012D14Rik	-	RIKEN cDNA 1700012D14 gene	ncRNA
common_peak2-31180-8-9--0.316705676939792-1.03275496310833	chr8	47532990	47533467	+	0	NA	Intergenic	Intergenic	-23168	NM_007981	14081	Mm.210323	NM_007981	ENSMUSG00000018796	Acsl1	Acas|Acas1|Acs|FACS|Facl2	acyl-CoA synthetase long-chain family member 1	protein-coding
common_peak1-17207-74-61-0.761690266591732-2.86406299923597	chr6	125313160	125314750	+	0	NA	intron (NM_198604, intron 15 of 16)	U6|snRNA|snRNA	14214	NM_011609	21937	Mm.1258	NM_011609	ENSMUSG00000030341	Tnfrsf1a	CD120a|FPF|TNF-R|TNF-R-I|TNF-R1|TNF-R55|TNF-alphaR1|TNFAR|TNFR60|TNFRI|TNFRp55|TNFalpha-R1|Tnfr-2|Tnfr1|p55|p55-R	tumor necrosis factor receptor superfamily, member 1a	protein-coding
unique_peak2-34056-5-19--2.02630843089322-2.19184853030482	chr12	118301438	118301984	+	0	NA	intron (NM_011215, intron 12 of 22)	ORR1B2|LTR|MaLR	88031	NR_033538	100038689	Mm.445351	NR_033538		Gm10421	ENSMUSG00000072792	predicted gene 10421	ncRNA
unique_peak1-4459-11-1-2.50869358425161-2.83420869758413	chr2	174346171	174346833	+	0	NA	Intergenic	Intergenic	-48060	NM_025531	66390	Mm.182294	NM_025531	ENSMUSG00000016257	Slmo2	2310042G06Rik|AA407013	slowmo homolog 2 (Drosophila)	protein-coding
unique_peak1-4704-12-1-2.64877598508764-3.36932189928148	chr3	101509415	101510017	+	0	NA	Intergenic	Intergenic	-101086	NM_144900	11928	Mm.280103	NM_144900	ENSMUSG00000033161	Atp1a1	Atpa-1|BC010319	ATPase, Na+/K+ transporting, alpha 1 polypeptide	protein-coding
common_peak1-14056-17-11-0.633333837483882-0.769930178837768	chr2	119491497	119492327	+	0	NA	Intergenic	Intergenic	-3378	NM_027175	69702	Mm.5390	NM_027175	ENSMUSG00000027305	Ndufaf1	2410001M24Rik|CGI-65|CIA30	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1	protein-coding
common_peak2-27621-14-26--0.855671341805824-0.949797625454538	chr3	105052096	105053030	+	0	NA	Intergenic	L1Md_F2|LINE|L1	182801	NM_029228	75269	Mm.307994	NM_029228	ENSMUSG00000051788	4930564D02Rik	-	RIKEN cDNA 4930564D02 gene	protein-coding
unique_peak2-32948-1-5--2.2120195109379-1.32905871926422	chr10	41302761	41303001	+	0	NA	intron (NM_001177571, intron 3 of 17)	intron (NM_001177571, intron 3 of 17)	4678	NM_001177571	75973	Mm.228517	NM_029493	ENSMUSG00000075225	Ccdc162	5033413D22Rik|Ccdc162p|Gm61	coiled-coil domain containing 162	protein-coding
common_peak2-23600-22-26--0.107603397076064-0.30528805757448	chr15	80711250	80711975	+	0	NA	exon (NM_144812, exon 8 of 25)	exon (NM_144812, exon 8 of 25)	-58857	NR_039573	100628612		NR_039573	miRBase:MI0018022	Mir5113	mmu-mir-5113|mu-mir-5113	microRNA 5113	ncRNA
common_peak2-24420-15-22--0.511397205501357-0.50761186003982	chr17	17121285	17122039	+	0	NA	Intergenic	MMERVK10C-int|LTR|ERVK	-79405	NM_001005358	449000	Mm.483718	NM_001005358	ENSMUSG00000096696	Zfp960	-	zinc finger protein 960	protein-coding
common_peak1-12741-27-53--0.763341551268232-1.43939133646632	chr18	56707012	56708511	+	0	NA	intron (NM_138600, intron 6 of 17)	intron (NM_138600, intron 6 of 17)	9968	NR_106160	102465790		NR_106160	miRBase:MI0025040	Mir1258	mmu-mir-1258	microRNA mir-1258	ncRNA
common_peak2-24647-10-22--1.16714661104824-1.30248952876293	chr17	35262541	35263568	+	0	NA	promoter-TSS (NM_033477)	promoter-TSS (NM_033477)	-293	NM_033477	114585	Mm.42070	NM_033477	ENSMUSG00000043311	D17H6S53E	G4|NG34	DNA segment, Chr 17, human D6S53E	protein-coding
common_peak2-24438-24-41--0.599107520011044-0.83607543869935	chr17	21566361	21567529	+	0	NA	intron (NM_011760, intron 2 of 3)	intron (NM_011760, intron 2 of 3)	6754	NM_011760	22712	Mm.12916	NM_011760	ENSMUSG00000023882	Zfp54	2810034D10Rik|KRAB10|Zfp-54|Zfp76|mszf83	zinc finger protein 54	protein-coding
common_peak1-7740-8-8--0.164702583494742-1.00793137938329	chr1	89121808	89122367	+	0	NA	intron (NM_001039169, intron 4 of 6)	intron (NM_001039169, intron 4 of 6)	11573	NM_001039169	26987	Mm.227183	NM_023314	ENSMUSG00000026254	Eif4e2	2700069E09Rik|AI036339|AV129531|D0H0S6743E|Eif4el3	eukaryotic translation initiation factor 4E member 2	protein-coding
unique_peak1-205-12-5-1.06381348436648-1.78669045979184	chr1	85736028	85736603	+	0	NA	Intergenic	Intergenic	-469174	NM_001037909	620078	Mm.386456	NM_175219	ENSMUSG00000052477	C130026I21Rik	4930565N07Rik|OTTMUSG00000029174	RIKEN cDNA C130026I21 gene	protein-coding
unique_peak1-4986-8-3-1.00522241794757-1.39487600375387	chr4	114870821	114871335	+	0	NA	Intergenic	MLT1B|LTR|MaLR	-43611	NM_001100183	230639	Mm.466610	NM_001100183		Cyp4a29	Cyp4a29-ps|OTTMUSG00000008612	cytochrome P450, family 4, subfamily a, polypeptide 29	protein-coding
common_peak1-7501-54-79--0.148842333257629-0.371520254652761	chr1	13659572	13660842	+	0	NA	intron (NM_001011873, intron 1 of 3)	L1Md_F3|LINE|L1	1355	NM_001011873	381246	Mm.311142	NM_001011873	ENSMUSG00000067813	Xkr9	Gm1620|XRG9	X Kell blood group precursor related family member 9 homolog	protein-coding
unique_peak1-1346-6-3-0.565398110380302-1.08602067057793	chr12	16872973	16873436	+	0	NA	Intergenic	Intergenic	-28580	NM_009072	19878	Mm.276024	NM_009072	ENSMUSG00000020580	Rock2	B230113H15Rik|ROKalpha|Rho-kinase|Rock-II|Rock2m|mKIAA0619	Rho-associated coiled-coil containing protein kinase 2	protein-coding
unique_peak1-2922-10-3-1.35641534500877-1.75805390616669	chr17	49429853	49430435	+	0	NA	Intergenic	Intergenic	22141	NR_033486	100415784	Mm.400421	NR_033486		Gm17830	-	predicted gene, 17830	ncRNA
unique_peak1-2807-9-1-2.18961340640422-2.31132995230379	chr17	23786839	23787382	+	0	NA	Intergenic	Intergenic	-4874	NM_001033339	240047	Mm.235343	NM_001033339	ENSMUSG00000023903	Mmp25	F730048C11Rik|Leukolysin|MMP20|MT6-MMP	matrix metallopeptidase 25	protein-coding
unique_peak1-6207-17-7-1.21829633820504-1.55050753388977	chr7	35340035	35340700	+	0	NA	Intergenic	Intergenic	97493	NM_146188	233107	Mm.486198	NM_146188	ENSMUSG00000030499	Kctd15	BC031749	potassium channel tetramerisation domain containing 15	protein-coding
common_peak2-22919-28-40--0.304592884796621-0.447010559430123	chr14	45658093	45659038	+	0	NA	Intergenic	Intergenic	50779	NM_008964	19217	Mm.4630	NM_008964	ENSMUSG00000037759	Ptger2	EP2|Ptgerep2	prostaglandin E receptor 2 (subtype EP2)	protein-coding
unique_peak2-35207-6-7--0.434601889619698-0.97990265578305	chr16	86993329	86993904	+	0	NA	Intergenic	Intergenic	-360814	NM_001159331	67768	Mm.296532	NM_026366	ENSMUSG00000044442	N6amt1	5830445C04Rik|Hemk2|Pred28	N-6 adenine-specific DNA methyltransferase 1 (putative)	protein-coding
unique_peak1-5035-9-8-0.0196884049619079-1.03275496310833	chr4	133055308	133055834	+	0	NA	Intergenic	Intergenic	-1106	NM_001081156	69539	Mm.151594	NM_001081156	ENSMUSG00000056596	Trnp1	2300002D11Rik|Trnp	TMF1-regulated nuclear protein 1	protein-coding
unique_peak2-32685-3-7--1.41398308995928-1.23214870625617	chr1	138507536	138508011	+	0	NA	Intergenic	RLTR42-int|LTR|ERVK	-13705	NM_177643	226442	Mm.62521	NM_177643	ENSMUSG00000041483	Zfp281	Znf281	zinc finger protein 281	protein-coding
common_peak2-24812-10-11--0.228547155712387-0.31137425193576	chr17	70741901	70742556	+	0	NA	Intergenic	Intergenic	-31904	NM_177639	224997	Mm.311840	NM_027712	ENSMUSG00000003279	Dlgap1	4933422O14Rik|9630002F18|AI845682|AI848168|BB075781|D17Bwg0511e|GKAP/SAPAP|GKPA/SAPAP|Gkap|Sapap1|mKIAA4162	discs, large (Drosophila) homolog-associated protein 1	protein-coding
unique_peak1-2423-8-0-3.00522241794757-2.70926996097583	chr15	101065247	101065714	+	0	NA	Intergenic	Intergenic	-9863	NR_045328	380977	Mm.399924	NR_045326	ENSMUSG00000097915	A330009N23Rik	-	RIKEN cDNA A330009N23 gene	ncRNA
common_peak1-16180-12-7-0.648775985087639-0.697979855752659	chr5	91401434	91402062	+	0	NA	intron (NM_026788, intron 5 of 7)	intron (NM_026788, intron 5 of 7)	41526	NM_026788	665563	Mm.153030	NM_026788	ENSMUSG00000029376	Mthfd2l	1110019K23Rik|C630010D07Rik	methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like	protein-coding
common_peak1-19363-12-9-0.326847890200276-0.459837087125828	chrX	13346195	13346813	+	0	NA	intron (NM_001284503, intron 2 of 26)	Lx|LINE|L1	77178	NM_001284505	12361	Mm.327591	NM_009806	ENSMUSG00000031012	Cask	DXPri1|DXRib1|LIN-2|Pals3|mLin-2	calcium/calmodulin-dependent serine protein kinase (MAGUK family)	protein-coding
unique_peak2-34173-6-7--0.434601889619698-0.97990265578305	chr13	32969345	32969766	+	0	NA	Intergenic	L1MEe|LINE|L1	20454	NM_173051	380839	Mm.250802	NM_173051		Serpinb1c	EIC|ovalbumin	serine (or cysteine) peptidase inhibitor, clade B, member 1c	protein-coding
unique_peak2-35513-3-5--0.998945590680433-0.96108193396963	chr17	47695143	47695557	+	0	NA	intron (NM_001081635, intron 1 of 6)	B3A|SINE|B2	-35066	NM_007632	12445	Mm.27291	NM_007632	ENSMUSG00000034165	Ccnd3	9230106B05Rik|AA682053|AL024085|AW146355|C78795	cyclin D3	protein-coding
unique_peak2-32860-9-11--0.395349094316936-0.344532117358383	chr10	99106732	99107367	+	0	NA	intron (NR_038019, intron 1 of 2)	intron (NR_038019, intron 1 of 2)	-2495	NR_038018	100417125	Mm.391428	NR_038018		Gm18409	-	mediator of cell motility 1 pseudogene	pseudo
common_peak2-26720-25-33--0.225612935905233-0.357106932979091	chr2	130664221	130664702	+	0	NA	intron (NM_029432, intron 1 of 36)	intron (NM_029432, intron 1 of 36)	1385	NM_029432	228602	Mm.271990	NM_029432	ENSMUSG00000027309	4930402H24Rik	2810487F15Rik|AI413763|C78926	RIKEN cDNA 4930402H24 gene	protein-coding
common_peak2-20229-26-11-1.34293659143731-2.2880788707084	chr1	181035304	181035985	+	0	NA	intron (NM_027188, intron 5 of 11)	intron (NM_027188, intron 5 of 11)	412490	NM_027188	69726	Mm.222338	NM_027188		Smyd3	2410008A19Rik|Zmynd1	SET and MYND domain containing 3	protein-coding
common_peak2-27188-4-14--1.93035110946177-2.23384849113406	chr3	36862586	36863044	+	0	NA	intron (NM_172679, intron 37 of 85)	Lx5|LINE|L1	-99763	NM_009350	21744	Mm.8122	NM_009350	ENSMUSG00000027719	Adad1	Tenr	adenosine deaminase domain containing 1 (testis specific)	protein-coding
unique_peak2-33863-6-13--1.2419568116773-1.58711810488664	chr12	21111785	21112294	+	0	NA	Intergenic	Intergenic	-5578	NM_001004364	211914	Mm.358946	NM_001004364	ENSMUSG00000052632	Asap2	6530401G17Rik|Ddef2|Gm1523|Gm592|PAG3|PAP	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	protein-coding
common_peak2-24351-20-29--0.418815811017326-0.51032171069054	chr17	5978949	5979840	+	0	NA	intron (NM_001113352, intron 2 of 25)	intron (NM_001113352, intron 2 of 25)	3808	NM_011523	20975	Mm.236068	NM_011523	ENSMUSG00000023805	Synj2	AI481647|SJ2|mKIAA0348	synaptojanin 2	protein-coding
unique_peak1-5346-13-3-1.77847203063777-2.58603100924543	chr5	91541755	91542453	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-26537	NM_009704	11839	Mm.8039	NM_009704	ENSMUSG00000029378	Areg	AR|Sdgf	amphiregulin	protein-coding
unique_peak2-38883-4-8--1.19338551529556-1.21878474469819	chr8	3426986	3427517	+	0	NA	intron (NM_133962, intron 1 of 19)	intron (NM_133962, intron 1 of 19)	34243	NM_133962	102098	Mm.170461	NM_133962	ENSMUSG00000004568	Arhgef18	AI467246|D030053O22Rik	rho/rac guanine nucleotide exchange factor (GEF) 18	protein-coding
common_peak2-27733-10-13--0.450939577048835-0.386243247519795	chr3	123679924	123680511	+	0	NA	Intergenic	MTD|LTR|MaLR	-286447	NR_121616	83398	Mm.443908	NM_031186	ENSMUSG00000027977	Ndst3	4921531K01Rik|4930511P15Rik|N-HSST 3|NDST-3	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	protein-coding
common_peak2-25836-10-8-0.186490343566457-1.078512453669	chr19	41384710	41385196	+	0	NA	intron (NM_031376, intron 8 of 16)	intron (NM_031376, intron 8 of 16)	-46459	NM_133352	107358	Mm.246440	NM_133352	ENSMUSG00000025016	Tm9sf3	1810073M23Rik|2810031D16Rik|AI115521|AI413748|AW146116|AW549777|Smbp|mKIAA4036	transmembrane 9 superfamily member 3	protein-coding
common_peak2-30621-10-6-0.549060422951165-1.21398586181642	chr7	90475573	90475985	+	0	NA	Intergenic	ORR1C2-int|LTR|MaLR	-257662	NM_177695	233424	Mm.486619	NM_177695		Tmc3	9030203A06	transmembrane channel-like gene family 3	protein-coding
unique_peak1-1458-26-2-3.34293659143731-6.68488818359222	chr12	108369908	108370875	+	0	NA	Intergenic	Intergenic	-415857	NR_015512	71033	Mm.159404	NR_015512	ENSMUSG00000085820	4933406K04Rik	4930426M03Rik|4930485I22Rik|4933427G14Rik	RIKEN cDNA 4933406K04 gene	ncRNA
common_peak2-27737-71-145--0.545380380160046-2.1060485881002	chr3	126595917	126598042	+	0	NA	Intergenic	L1Md_F|LINE|L1	49325	NM_001034168	109676	Mm.220242	NM_178655	ENSMUSG00000032826	Ank2	AI835472|AW491075|Ank-2	ankyrin 2, brain	protein-coding
common_peak2-30819-15-24--0.631691439219068-0.650819692678081	chr7	128611272	128612184	+	0	NA	intron (NM_001081327, intron 1 of 1)	intron (NM_001081327, intron 1 of 1)	75918	NM_001081327	195646	Mm.247449	NM_177575	ENSMUSG00000046321	Hs3st2	6430516N12Rik|A830061E14Rik|AW491345	heparan sulfate (glucosamine) 3-O-sulfotransferase 2	protein-coding
common_peak2-26893-6-9--0.75652998450706-1.11707584880836	chr2	157553055	157553464	+	0	NA	Intergenic	RCHARR1|DNA|MER1_type	-9878	NM_025680	66642	Mm.45193	NM_025680	ENSMUSG00000027649	Ctnnbl1	5730471K09Rik|NAP|NYD-SP19|P14L	catenin, beta like 1	protein-coding
common_peak2-25008-170-259-0.13590468662168-0.591608263714073	chr18	14681817	14683535	+	0	NA	Intergenic	ORR1D2|LTR|MaLR	158747	NM_001161369	268996	Mm.31761	NM_009280	ENSMUSG00000037013	Ss18	D130059H17|Ssxt|Syt	synovial sarcoma translocation, Chromosome 18	protein-coding
unique_peak1-168-8-0-3.00522241794757-2.70926996097583	chr1	74042483	74042998	+	0	NA	intron (NM_001289895, intron 7 of 32)	intron (NM_001289895, intron 7 of 32)	128281	NM_027884	21961	Mm.309975	NM_027884	ENSMUSG00000055322	Tns1	1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns	tensin 1	protein-coding
unique_peak1-1417-7-0-2.79909083029819-2.40823996531185	chr12	80129760	80130208	+	0	NA	promoter-TSS (NM_181073)	promoter-TSS (NM_181073)	-166	NM_181073	211945	Mm.478321	NM_181073	ENSMUSG00000060716	Plekhh1	AV308913|C77772|D630024D12Rik|mKIAA1200	pleckstrin homology domain containing, family H (with MyTH4 domain) member 1	protein-coding
common_peak1-7603-18-9-0.990991056340989-1.23014042908325	chr1	58445498	58446405	+	0	NA	Intergenic	B1F1|SINE|Alu	-4029	NM_025824	66882	Mm.21848	NM_025824	ENSMUSG00000051223	Bzw1	1200015E15Rik|mKIAA0005	basic leucine zipper and W2 domains 1	protein-coding
common_peak1-13643-24-36--0.416243462861233-0.518746288394493	chr2	26122232	26123129	+	0	NA	Intergenic	Intergenic	27397	NM_177841	329366	Mm.77712	NM_177841	ENSMUSG00000048038	4932418E24Rik	-	RIKEN cDNA 4932418E24 gene	protein-coding
common_peak2-23499-11-7-0.508693584251613-1.21681515183528	chr15	76203737	76204149	+	0	NA	exon (NM_183099, exon 4 of 8)	exon (NM_183099, exon 4 of 8)	1425	NM_183099	73542	Mm.159026	NM_183099	ENSMUSG00000060794	Tssk5	1700091F14Rik	testis-specific serine kinase 5	protein-coding
unique_peak1-5185-14-3-1.89921616035764-2.80787975886178	chr5	31290417	31291070	+	0	NA	intron (NR_105788, intron 2 of 7)	B1_Mur3|SINE|Alu	19693	NM_053085	69852	Mm.57874	NM_053085	ENSMUSG00000006642	Tcf23	2010002O16Rik|Out|bHLHa24	transcription factor 23	protein-coding
unique_peak2-33470-4-8--1.19338551529556-1.21878474469819	chr11	69122200	69122659	+	0	NA	intron (NM_172560, intron 12 of 18)	intron (NM_172560, intron 12 of 18)	14946	NM_172560	216846	Mm.28774	NM_172560	ENSMUSG00000032782	Cntrob	9830165K03Rik|Lip8	centrobin, centrosomal BRCA2 interacting protein	protein-coding
common_peak2-32138-6-6--0.241956811677302-0.947717972411649	chr9	106886133	106886459	+	0	NA	intron (NM_153413, intron 22 of 52)	Lx9|LINE|L1	-92027	NM_029103	74840	Mm.29778	NM_029103	ENSMUSG00000032575	Manf	3230402M22Rik|AA407711|AA408789|AA673178|Armet|D17914|D18Mgi17	mesencephalic astrocyte-derived neurotrophic factor	protein-coding
unique_peak2-36377-3-7--1.41398308995928-1.23214870625617	chr2	118112601	118113035	+	0	NA	intron (NM_201367, intron 1 of 2)	intron (NM_201367, intron 1 of 2)	-17832	NR_045919	73358	Mm.437192	NR_045919	ENSMUSG00000085889	1700054M17Rik	-	RIKEN cDNA 1700054M17 gene	ncRNA
common_peak2-23955-8-5-0.420259917226415-1.10484139239135	chr16	15252914	15253285	+	0	NA	Intergenic	Intergenic	341512	NM_001159351	70620	Mm.235407	NM_023585		Ube2v2	1110021H13Rik|4632410D19Rik|5730524P06Rik|6820402M05|AI848315|C81524|MMS2	ubiquitin-conjugating enzyme E2 variant 2	protein-coding
common_peak2-28742-14-16--0.188246680892695-0.308035960714963	chr5	36722767	36723495	+	0	NA	intron (NM_030889, intron 1 of 26)	intron (NM_030889, intron 1 of 26)	17657	NM_030889	81840	Mm.34113	NM_030889	ENSMUSG00000029093	Sorcs2	N28137|mKIAA1329	sortilin-related VPS10 domain containing receptor 2	protein-coding
common_peak2-31744-25-37--0.386077608098479-0.512115693271959	chr9	15493469	15494336	+	0	NA	Intergenic	Intergenic	-20311	NM_172289	234967	Mm.138815	NM_172289	ENSMUSG00000043885	Slc36a4	6330573I15Rik|PAT4	solute carrier family 36 (proton/amino acid symporter), member 4	protein-coding
unique_peak1-2323-7-3-0.799090830298189-1.23214870625617	chr15	83204787	83205205	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-7269	NR_027980	69291	Mm.66794	NM_001033147		1700001L05Rik	-	RIKEN cDNA 1700001L05 gene	ncRNA
common_peak1-13260-14-10-0.439784541720347-0.519648556297791	chr19	33030229	33030974	+	0	NA	Intergenic	Intergenic	198534	NM_008960	19211	Mm.245395	NM_008960	ENSMUSG00000013663	Pten	2310035O07Rik|A130070J02Rik|AI463227|B430203M17Rik|MMAC1|TEP1	phosphatase and tensin homolog	protein-coding
unique_peak1-1406-12-5-1.06381348436648-1.78669045979184	chr12	75853542	75854128	+	0	NA	Intergenic	Intergenic	424484	NM_172805	238271	Mm.44465	NM_172805	ENSMUSG00000034402	Kcnh5	Eag2	potassium voltage-gated channel, subfamily H (eag-related), member 5	protein-coding
unique_peak1-6345-8-1-2.00522241794757-2.05605744720049	chr7	58626459	58626969	+	0	NA	Intergenic	GA-rich|Low_complexity|Low_complexity	-139685	NR_073508	233246	Mm.254431	NM_177694	ENSMUSG00000055489	Ano5	9330162L24|Gdd1|Tmem16e	anoctamin 5	protein-coding
common_peak1-11298-20-22--0.03548717146582-0.301029995663994	chr15	83474546	83475415	+	0	NA	intron (NM_001271473, intron 4 of 19)	intron (NM_001271473, intron 4 of 19)	-49393	NM_183017	223723	Mm.46778	NM_183017	ENSMUSG00000016757	Ttll12	BC055368|D430005B17	tubulin tyrosine ligase-like family, member 12	protein-coding
common_peak1-16791-19-8-1.23276232521937-1.61268301619756	chr6	41199587	41200587	+	0	NA	Intergenic	Lx7|LINE|L1	-52184	NM_011646	22074	Mm.383263	NM_011646	ENSMUSG00000054106	Try4	0910001B19Rik|Td	trypsin 4	protein-coding
common_peak2-20188-27-48--0.623163893219973-1.00060938969219	chr1	172500035	172501153	+	0	NA	intron (NM_001109985, intron 1 of 9)	RMER17C|LTR|ERVK	-13353	NM_027528	70729	Mm.487078	NM_027528	ENSMUSG00000038473	Nos1ap	6330408P19Rik|Capon	nitric oxide synthase 1 (neuronal) adaptor protein	protein-coding
common_peak2-30052-11-5-0.923731083530457-1.477227296591	chr6	128200300	128200753	+	0	NA	intron (NM_011567, intron 4 of 11)	intron (NM_011567, intron 4 of 11)	50305	NM_001080979	21679	Mm.14774	NM_011567	ENSMUSG00000030353	Tead4	ETFR-2|Etfr2|FR-19|Rtef1|TEAD-4|TEF-3|Tcf13r1|Tef3|Tefr|Tefr1|Tefr1a	TEA domain family member 4	protein-coding
common_peak2-22188-17-23--0.366666162516118-0.383878263347744	chr12	108178667	108179303	+	0	NA	Intergenic	Intergenic	-224451	NR_015512	71033	Mm.159404	NR_015512	ENSMUSG00000085820	4933406K04Rik	4930426M03Rik|4930485I22Rik|4933427G14Rik	RIKEN cDNA 4933406K04 gene	ncRNA
common_peak1-14429-12-32--1.39561813427081-2.09887956687855	chr2	180589404	180589970	+	0	NA	Intergenic	Intergenic	-39058	NR_029538	723951		NR_029538		Mir124a-3	Mirn124a-3|mir-124a-3	microRNA 124a-3	ncRNA
unique_peak1-3988-11-0-3.50869358425161-3.61235994796777	chr2	34775623	34776151	+	0	NA	Intergenic	RMER15|LTR|ERVL	-6391	NM_028716	74016	Mm.65691	NM_028716	ENSMUSG00000026873	Phf19	3110009G19Rik|3321402G02Rik	PHD finger protein 19	protein-coding
unique_peak2-37127-4-7--1.02346051385325-1.09384600808989	chr4	11323248	11323652	+	0	NA	Intergenic	B1_Mur4|SINE|Alu	-9520	NM_194055	207920	Mm.387719	NM_194055	ENSMUSG00000040728	Esrp1	2210008M09Rik|A630065D16|BC031468|Rbm35a	epithelial splicing regulatory protein 1	protein-coding
common_peak1-11255-9-9--0.132314688483142-1.03275496310833	chr15	80167676	80168274	+	0	NA	intron (NM_001044308, intron 5 of 36)	RLTR12B|LTR|ERVK	50307	NM_001044308	239556	Mm.291058	NM_001044308	ENSMUSG00000022416	Cacna1i	Ca(V)3.3	calcium channel, voltage-dependent, alpha 1I subunit	protein-coding
unique_peak1-2501-9-0-3.18961340640422-3.01029995663981	chr16	13249487	13250066	+	0	NA	Intergenic	Intergenic	-6798	NM_001122667	239719	Mm.270643	NM_153588	ENSMUSG00000009569	Mkl2	ENSMUSG00000075401|Gt4-1|MRTF-B|Mrtfb|mKIAA1243	MKL/myocardin-like 2	protein-coding
common_peak2-24386-8-5-0.420259917226415-1.10484139239135	chr17	12792399	12792785	+	0	NA	intron (NM_013667, intron 3 of 10)	MTE2b|LTR|MaLR	15537	NM_013667	20518	Mm.17322	NM_013667	ENSMUSG00000040966	Slc22a2	Oct2|Orct2	solute carrier family 22 (organic cation transporter), member 2	protein-coding
common_peak2-26406-19-15-0.402687326661686-0.519193887192487	chr2	59171225	59171621	+	0	NA	intron (NM_175464, intron 11 of 20)	intron (NM_175464, intron 11 of 20)	53316	NR_040510	76676	Mm.110038	NR_040510	ENSMUSG00000087455	5330411J11Rik	-	RIKEN cDNA 5330411J11 gene	ncRNA
common_peak1-12101-13-10-0.319040412000471-0.446472590016315	chr17	25792440	25793107	+	0	NA	intron (NM_029624, intron 9 of 10)	intron (NM_029624, intron 9 of 10)	-61344	NM_022422	64337	Mm.171123	NM_022422	ENSMUSG00000025739	Gng13	1500031D04Rik|AB030194|Ggamma13	guanine nucleotide binding protein (G protein), gamma 13	protein-coding
common_peak2-20922-14-8-0.729291158915332-0.771068449301682	chr11	6200676	6201082	+	0	NA	intron (NM_001252287, intron 2 of 22)	B1_Mus2|SINE|Alu	8318	NM_001252288	18293	Mm.276348	NM_010956	ENSMUSG00000020456	Ogdh	2210403E04Rik|2210412K19Rik|AA409584|d1401|mKIAA4192	oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)	protein-coding
common_peak1-15214-16-7-1.11826364226806-1.23399803405144	chr4	126533013	126533784	+	0	NA	intron (NM_001035526, intron 22 of 23)	intron (NM_001035526, intron 22 of 23)	102384	NM_001035526	100317	Mm.206206	NM_133886	ENSMUSG00000028830	AU040320	A730047D20Rik|Kiaa0319l	expressed sequence AU040320	protein-coding
unique_peak1-7310-21-4-2.24756117037887-3.74275476306371	chr9	117961190	117962128	+	0	NA	intron (NM_001286508, intron 5 of 7)	intron (NM_001286508, intron 5 of 7)	12019	NM_013727	27215	Mm.92705	NM_013727	ENSMUSG00000039285	Azi2	AA410145|AZ2	5-azacytidine induced gene 2	protein-coding
common_peak1-18846-23-15-0.721767504509081-0.949797625454541	chr9	18473265	18474434	+	0	NA	Intergenic	Intergenic	86228	NM_146606	18322	Mm.246530	NM_146606	ENSMUSG00000054141	Olfr24	MOR132-1|MTPCR51	olfactory receptor 24	protein-coding
common_peak2-25092-18-19--0.00900894365901106-0.306598483909153	chr18	36408547	36409393	+	0	NA	Intergenic	B1F1|SINE|Alu	-31846	NM_008989	19290	Mm.231802	NM_008989		Pura	CAGER-1|Pur-alpha|ssCRE-BP	purine rich element binding protein A	protein-coding
unique_peak2-34447-0-20--5.23244835325297-4.8766546284749	chr14	21993523	21994521	+	0	NA	intron (NM_134079, intron 4 of 10)	intron (NM_134079, intron 4 of 10)	98648	NM_001243041	11534	Mm.188734	NM_134079	ENSMUSG00000039197	Adk	2310026J05Rik|5033405D03Rik|AI255373|AI987814|Ak	adenosine kinase	protein-coding
common_peak1-13994-39-48-0.00105140280394522-0.303268666669768	chr2	104027620	104028732	+	0	NA	intron (NM_001033347, intron 16 of 20)	Lx5|LINE|L1	65250	NM_026634	68243	Mm.158191	NM_026634	ENSMUSG00000032671	A930018P22Rik	-	RIKEN cDNA A930018P22 gene	protein-coding
common_peak1-18448-11-12--0.191746133889479-0.310474156842889	chr8	83594566	83595122	+	0	NA	Intergenic	Intergenic	-56039	NM_027554	74841	Mm.246018	NM_027554	ENSMUSG00000038250	Usp38	4631402N15Rik|4833420O05Rik|AA536967|AU044701|AW544820|mKIAA1891	ubiquitin specific peptidase 38	protein-coding
unique_peak2-37211-4-12--1.72390023199434-1.85743853830261	chr4	80972280	80972805	+	0	NA	intron (NM_010820, intron 24 of 46)	intron (NM_010820, intron 24 of 46)	116167	NM_010820	17475	Mm.153039	NM_010820	ENSMUSG00000028402	Mpdz	AI225843|B930003D11Rik|MUPP1	multiple PDZ domain protein	protein-coding
common_peak2-29152-36-54--0.302038627356906-0.47894145157142	chr5	129020193	129021442	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-81880	NM_172885	243274	Mm.447698	NM_172885	ENSMUSG00000034310	Tmem132d	C630028F04Rik	transmembrane protein 132D	protein-coding
unique_peak2-38090-2-7--1.91745425626332-1.45399745587252	chr6	55203424	55203715	+	0	NA	intron (NM_001142781, intron 5 of 17)	intron (NM_001142781, intron 5 of 17)	50192	NM_001142781	330323	Mm.268997	NM_177883	ENSMUSG00000038022	Fam188b	C330043M08Rik|Gm1406	family with sequence similarity 188, member B	protein-coding
common_peak1-19357-11-33--1.57876925699873-2.80071159219767	chrX	12587858	12588324	+	0	NA	Intergenic	Intergenic	-31050	NR_038158	70489	Mm.383563	NR_038158	ENSMUSG00000087424	5730405O15Rik	-	RIKEN cDNA 5730405O15 gene	ncRNA
unique_peak2-39825-6-7--0.434601889619698-0.97990265578305	chrX	42151474	42151999	+	0	NA	Intergenic	B4A|SINE|B4	-8362	NM_178739	245404	Mm.55685	NM_178739	ENSMUSG00000045284	Dcaf12l1	9330180J20|A230038L21Rik|Decaf12l1|Wdr40b	DDB1 and CUL4 associated factor 12-like 1	protein-coding
common_peak1-11024-14-23--0.685746340363512-0.669502273696327	chr15	38661994	38662756	+	0	NA	Intergenic	Intergenic	70716	NM_025494	66335	Mm.276618	NM_025494	ENSMUSG00000022295	Atp6v1c1	1700025B18Rik|U13839	ATPase, H+ transporting, lysosomal V1 subunit C1	protein-coding
common_peak2-30899-14-16--0.188246680892695-0.308035960714963	chr7	142437681	142438362	+	0	NA	Intergenic	Intergenic	-22281	NM_001163611	100043254	Mm.192092	NM_001163611	ENSMUSG00000073804	Nps	ENSMUSG00000073804	neuropeptide S	protein-coding
unique_peak2-32634-5-6--0.511735258063458-0.947717972411649	chr1	126817358	126817843	+	0	NA	Intergenic	Lx4A|LINE|L1	514704	NM_023735	74117	Mm.183102	NM_023735	ENSMUSG00000026341	Actr3	1200003A09Rik|Arp3	ARP3 actin-related protein 3	protein-coding
unique_peak1-3448-15-7-1.01216475055566-1.08658567012551	chr19	7497249	7498017	+	0	NA	TTS (NR_105957)	TTS (NR_105957)	570	NR_105957	102466781		NR_105957		Mir6991	mmu-mir-6991	microRNA mir-6991	ncRNA
unique_peak2-36934-8-7-0.00522241794757061-1.00793137938329	chr3	103171064	103171541	+	0	NA	Intergenic	Intergenic	88086	NM_001079830	94093	Mm.195036	NM_053170	ENSMUSG00000033014	Trim33	8030451N04Rik|AI413936|Ecto|Tif1g	tripartite motif-containing 33	protein-coding
common_peak2-21116-119-92-0.999279110022013-7.34080326534912	chr11	53299670	53301492	+	0	NA	Intergenic	RMER1A|Other|Other	-6884	NM_183173	237761	Mm.145208	NM_183173	ENSMUSG00000044352	Sowaha	A830006N08Rik|Ankrd43	sosondowah ankyrin repeat domain family member A	protein-coding
unique_peak1-1804-8-2-1.42025991722641-1.65811743852845	chr14	25462853	25463404	+	0	NA	Intergenic	B4A|SINE|B4	153225	NM_011297	20088	Mm.16775	NM_011297	ENSMUSG00000025290	Rps24	-	ribosomal protein S24	protein-coding
common_peak1-9174-30-57--0.688305585635699-1.33966217785262	chr11	78245208	78246247	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	-10040	NM_022411	20500	Mm.274058	NM_022411	ENSMUSG00000001095	Slc13a2	Nadc1|mNaDC-1	solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2	protein-coding
unique_peak1-1143-13-6-0.971117108580164-1.01572999746118	chr11	97434806	97435343	+	0	NA	intron (NM_018873, intron 1 of 19)	intron (NM_018873, intron 1 of 19)	1366	NM_018873	56013	Mm.342665	NM_018873	ENSMUSG00000038453	Srcin1	P140|SNIP|mKIAA1684|p140Cap	SRC kinase signaling inhibitor 1	protein-coding
common_peak1-10692-8-10--0.454209200689727-1.078512453669	chr14	55557462	55557981	+	0	NA	exon (NM_026066, exon 4 of 5)	exon (NM_026066, exon 4 of 5)	2387	NM_029390	67272	Mm.41614	NM_026066	ENSMUSG00000040759	Cmtm5	1500005P16Rik|2900052H21Rik|Cklfsf5	CKLF-like MARVEL transmembrane domain containing 5	protein-coding
unique_peak1-6198-47-9-2.61291332987919-9.7095694117554	chr6	148991465	148992832	+	0	NA	intron (NM_177192, intron 5 of 20)	intron (NM_177192, intron 5 of 20)	58054	NM_177192	320560	Mm.426874	NM_177192	ENSMUSG00000030313	Dennd5b	9330160C06Rik|AI852444|D030011O10Rik|ENSMUSG00000072657|Gm17524	DENN/MADD domain containing 5B	protein-coding
common_peak1-14585-10-5-0.771452844287613-1.33892459842472	chr3	41375634	41376023	+	0	NA	intron (NM_001130186, intron 1 of 10)	intron (NM_001130186, intron 1 of 10)	7026	NM_001130186	269424	Mm.286285	NM_172303	ENSMUSG00000025764	Jade1	AU041499|D530048A03Rik|Phf17|mKIAA1807	jade family PHD finger 1	protein-coding
common_peak2-20945-11-15--0.491306415748387-0.435191258261915	chr11	8761328	8761841	+	0	NA	Intergenic	Lx8|LINE|L1	149556	NM_008316	15574	Mm.42201	NM_008316	ENSMUSG00000020413	Hus1	mHus1	Hus1 homolog (S. pombe)	protein-coding
common_peak2-30317-12-13--0.158578936969966-0.301029995663979	chr7	24463050	24463633	+	0	NA	Intergenic	Intergenic	20006	NM_030735	81010	Mm.379267	NM_030735	ENSMUSG00000035523	Vmn1r172	V1rd9|V3R9	vomeronasal 1 receptor 172	protein-coding
common_peak1-8206-9-13--0.617741515653384-0.459837087125828	chr10	5212680	5213185	+	0	NA	intron (NM_001079686, intron 16 of 54)	L1Md_F2|LINE|L1	61098	NM_001079686	64009	Mm.331626	NM_022027	ENSMUSG00000019769	Syne1	8B|A330049M09Rik|BE692247|C130039F11Rik|CPG2|Myne1|mKIAA1756	spectrin repeat containing, nuclear envelope 1	protein-coding
unique_peak1-1702-8-1-2.00522241794757-2.05605744720049	chr13	91909506	91909889	+	0	NA	exon (NM_028790, exon 6 of 15)	exon (NM_028790, exon 6 of 15)	-28220	NR_028313	373852	Mm.466817	NR_015501	ENSMUSG00000074782	4833422C13Rik	-	RIKEN cDNA 4833422C13 gene	ncRNA
common_peak2-22782-19-29--0.504203268946832-0.580176690544129	chr14	75283827	75284776	+	0	NA	intron (NM_001033439, intron 1 of 19)	intron (NM_001033439, intron 1 of 19)	63383	NM_001252132	380916	Mm.288868	NM_001033439	ENSMUSG00000068015	Lrch1	4832412D13Rik|AI552548|AW215503|Chdc1|mKIAA1016	leucine-rich repeats and calponin homology (CH) domain containing 1	protein-coding
common_peak1-14862-19-19-0.0807592317743238-0.322753776620787	chr3	95230725	95231612	+	0	NA	promoter-TSS (NR_033637)	promoter-TSS (NR_033637)	-103	NR_033637	100043305	Mm.412052	NR_033637		Gm4349	-	SET domain, bifurcated 1 pseudogene	pseudo
unique_peak2-39860-7-11--0.785871670422967-1.21681515183528	chrX	73342623	73343306	+	0	NA	Intergenic	ORR1B1|LTR|MaLR	-166681	NM_001013760	238829	Mm.292319	NM_001013760	ENSMUSG00000071738	Gm4937	EG238829	predicted gene 4937	protein-coding
common_peak1-9299-14-34--1.23006685658732-1.94354392707378	chr11	89187216	89187872	+	0	NA	Intergenic	Intergenic	-23671	NM_008711	18121	Mm.135266	NM_008711	ENSMUSG00000048616	Nog	-	noggin	protein-coding
common_peak2-24942-12-9-0.326847890200276-0.459837087125828	chr18	5619690	5620146	+	0	NA	intron (NM_011546, intron 1 of 7)	intron (NM_011546, intron 1 of 7)	-27483	NR_033552	791318	Mm.84339	NR_033552	ENSMUSG00000063087	Gm10125	ENSMUSG00000063087|Zeb1os	predicted gene 10125	ncRNA
common_peak2-23887-76-75-0.514016872419696-1.67315279398724	chr16	58521987	58523879	+	0	NA	intron (NM_018784, intron 1 of 10)	intron (NM_018784, intron 1 of 10)	492	NM_018784	54613	Mm.212742	NM_018784	ENSMUSG00000022747	St3gal6	1700023B24Rik|AI930218|AW552396|Siat10|St3galVI	ST3 beta-galactoside alpha-2,3-sialyltransferase 6	protein-coding
common_peak2-30476-8-6-0.197867495889966-1.03789460276074	chr7	49326068	49326504	+	0	NA	Intergenic	Intergenic	-11935	NM_001105056	628444	Mm.469901	NM_001105056	ENSMUSG00000092032	Vmn2r59	EG628444	vomeronasal 2, receptor 59	protein-coding
common_peak1-11770-17-38--1.06710588065721-1.70296806472143	chr16	44172987	44173794	+	0	NA	promoter-TSS (NM_001029889)	promoter-TSS (NM_001029889)	-120	NM_001029889	207806	Mm.310566	NM_001029889	ENSMUSG00000068284	Gm608	5530400K22Rik|Gm1779|mKIAA2018	predicted gene 608	protein-coding
unique_peak2-34596-5-6--0.511735258063458-0.947717972411649	chr14	70191498	70191844	+	0	NA	intron (NM_153514, intron 7 of 9)	intron (NM_153514, intron 7 of 9)	13681	NM_153514	246710	Mm.102367	NM_153514	ENSMUSG00000022075	Rhobtb2	Dbc2|E130206H14Rik|mKIAA0717	Rho-related BTB domain containing 2	protein-coding
common_peak1-16335-47-40-0.577289420148464-1.25612039445446	chr5	117359832	117361613	+	0	NA	Intergenic	Intergenic	205280	NM_001122666	71954	Mm.34456	NM_178622	ENSMUSG00000066900	Suds3	2400003N08Rik|2410008L21Rik|AU067672|mSds3	suppressor of defective silencing 3 homolog (S. cerevisiae)	protein-coding
common_peak2-30713-24-20-0.400892479988956-0.591915184368645	chr7	113260868	113261637	+	0	NA	Intergenic	Intergenic	-38590	NR_030719	668108	Mm.429088	NR_030719		Gm8979	EG668108|Gm21884	very large inducible GTPase 1 pseudogene	pseudo
common_peak1-12685-13-7-0.778472030637769-0.817533494790411	chr18	38855613	38856387	+	0	NA	Intergenic	Intergenic	-95078	NM_011898	24066	Mm.42038	NM_011898	ENSMUSG00000024427	Spry4	A030006O18Rik|sprouty4	sprouty homolog 4 (Drosophila)	protein-coding
common_peak1-14587-12-25--1.05166373305345-1.1381569562463	chr3	41563205	41563974	+	0	NA	TTS (NM_028667)	TTS (NM_028667)	17049	NM_027271	73852	Mm.29006	NM_027271	ENSMUSG00000025766	D3Ertd751e	2810009O15Rik|4930415G15Rik	DNA segment, Chr 3, ERATO Doi 751, expressed	protein-coding
common_peak1-17429-36-55--0.328033835889849-0.518540604135986	chr7	13037200	13038714	+	0	NA	Intergenic	L1_Mur1|LINE|L1	-25697	NM_001039951	67370	Mm.98929	NM_026112	ENSMUSG00000030386	Zfp606	2410022M24Rik|AW494727	zinc finger protein 606	protein-coding
common_peak2-23593-48-37-0.722999637791229-1.78594796811656	chr15	80169714	80170891	+	0	NA	intron (NM_001044308, intron 5 of 36)	intron (NM_001044308, intron 5 of 36)	52634	NM_001044308	239556	Mm.291058	NM_001044308	ENSMUSG00000022416	Cacna1i	Ca(V)3.3	calcium channel, voltage-dependent, alpha 1I subunit	protein-coding
common_peak2-28284-18-30--0.641277159158523-0.738267116931589	chr4	129795539	129796477	+	0	NA	intron (NM_026441, intron 1 of 4)	ORR1A3-int|LTR|MaLR	11208	NM_026441	67898	Mm.20818	NM_026441	ENSMUSG00000028779	Pef1	2600002E23Rik|Peflin	penta-EF hand domain containing 1	protein-coding
common_peak2-24537-93-152--0.146317979186383-0.447848638497393	chr17	27554796	27556474	+	0	NA	Intergenic	ORR1C2|LTR|MaLR	60593	NR_106077	102466228		NR_106077		Mir7218	mmu-mir-7218	microRNA mir-7218	ncRNA
unique_peak2-39630-2-6--1.72480917832092-1.26211192963361	chr9	98498137	98498540	+	0	NA	intron (NM_025485, intron 2 of 7)	intron (NM_025485, intron 2 of 7)	3760	NM_025485	64655	Mm.17949	NM_025485	ENSMUSG00000032459	Mrps22	3100002P07Rik|Rpms22	mitochondrial ribosomal protein S22	protein-coding
unique_peak1-3978-14-3-1.89921616035764-2.80787975886178	chr2	32868036	32868800	+	0	NA	intron (NM_178888, intron 17 of 28)	(TG)n|Simple_repeat|Simple_repeat	-30842	NM_019488	56017	Mm.305754	NM_019488	ENSMUSG00000026791	Slc2a8	D2Ertd44e|GLUT8|GlutX1	solute carrier family 2, (facilitated glucose transporter), member 8	protein-coding
common_peak2-22978-11-9-0.186765489364251-0.344532117358383	chr14	55478778	55479437	+	0	NA	intron (NM_001177705, intron 1 of 1)	intron (NM_001177705, intron 1 of 1)	220	NM_183174	239099	Mm.280994	NM_183174	ENSMUSG00000057156	Homez	mKIAA1443	homeodomain leucine zipper-encoding gene	protein-coding
common_peak2-20151-29-32-0.0678959612566574-0.330208782692001	chr1	168598342	168599410	+	0	NA	intron (NM_172844, intron 7 of 9)	intron (NM_172844, intron 7 of 9)	13100	NM_172844	240894	Mm.246610	NM_172844	ENSMUSG00000026560	Fmo9	4831428F09Rik	flavin containing monooxygenase 9	protein-coding
unique_peak1-4065-12-5-1.06381348436648-1.78669045979184	chr2	65022799	65023288	+	0	NA	intron (NM_027225, intron 1 of 12)	intron (NM_027225, intron 1 of 12)	53640	NM_177025	319876	Mm.34159	NM_027225	ENSMUSG00000034903	Cobll1	1810047P18Rik|Coblr1|D430044D16Rik	Cobl-like 1	protein-coding
unique_peak1-1094-20-1-3.48807478459119-5.43827864561946	chr11	88593801	88594598	+	0	NA	Intergenic	L1_Mus4|LINE|L1	14242	NR_038058	193280	Mm.396842	NR_038058		C030037D09Rik	9330160M04	RIKEN cDNA C030037D09 gene	ncRNA
unique_peak1-2167-12-0-3.64877598508764-4.21441993929574	chr15	61377161	61377841	+	0	NA	Intergenic	Intergenic	228505	NR_040350	432956	Mm.404918	NR_040350		D030024E09Rik	-	RIKEN cDNA D030024E09 gene	ncRNA
common_peak2-30794-37-55--0.281361850571785-0.475408985215012	chr7	127344912	127346143	+	0	NA	promoter-TSS (NM_016669)	promoter-TSS (NM_016669)	-25	NM_016669	12971	Mm.9114	NM_016669	ENSMUSG00000030905	Crym	-	crystallin, mu	protein-coding
common_peak1-10038-28-44--0.438893976508212-0.643431604871956	chr13	14629706	14630576	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-14648	NM_001081348	94253	Mm.125298	NM_153130	ENSMUSG00000021301	Hecw1	9330116H24Rik|AV273951|E130207I19Rik|Nedl1	HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	protein-coding
unique_peak2-35924-6-8--0.60452689106201-1.03789460276074	chr19	6131385	6131809	+	0	NA	Intergenic	ORR1C1|LTR|MaLR	-3382	NM_026912	69024	Mm.329629	NM_026912	ENSMUSG00000024787	Snx15	1500032B08Rik|E130013C21Rik	sorting nexin 15	protein-coding
unique_peak1-5954-13-5-1.19350952991661-1.95509489018123	chr6	91712123	91712713	+	0	NA	3' UTR (NM_001159507, exon 24 of 24)	3' UTR (NM_001159507, exon 24 of 24)	44969	NM_001159507	243547	Mm.333264	NM_001033353	ENSMUSG00000030098	Grip2	-	glutamate receptor interacting protein 2	protein-coding
common_peak1-9288-22-21-0.187852486450107-0.376654945067947	chr11	88555689	88556687	+	0	NA	intron (NM_001201341, intron 5 of 7)	intron (NM_001201341, intron 5 of 7)	23355	NM_054043	76626	Mm.400451	NM_054043	ENSMUSG00000069769	Msi2	1700105C15Rik|AI451722|AI563628|AW489193|Msi2h	musashi RNA-binding protein 2	protein-coding
common_peak1-16707-61-83--0.00956809302942041-0.301029995663994	chr6	24663184	24665253	+	0	NA	Intergenic	L2c|LINE|L2	-19027	NM_028920	74409	Mm.87331	NM_028920	ENSMUSG00000029679	Hyal6	4932701A20Rik|Hyal-ps1|Hyalp1	hyaluronoglucosaminidase 6	protein-coding
common_peak2-22772-27-21-0.532114332257938-0.800403172662453	chr14	25460344	25461386	+	0	NA	Intergenic	Intergenic	150962	NM_011297	20088	Mm.16775	NM_011297	ENSMUSG00000025290	Rps24	-	ribosomal protein S24	protein-coding
common_peak2-22837-36-43-0.0198894675304571-0.310901174692144	chr14	20733697	20734868	+	0	NA	intron (NM_001285910, intron 1 of 2)	Lx9|LINE|L1	61633	NM_001285911	14702	Mm.41737	NM_010315	ENSMUSG00000043004	Gng2	82	guanine nucleotide binding protein (G protein), gamma 2	protein-coding
unique_peak2-35908-4-11--1.6084230145744-1.68134727924692	chr19	5023444	5023956	+	0	NA	promoter-TSS (NM_007854)	promoter-TSS (NM_007854)	-306	NM_007854	13340	Mm.4930	NM_007854	ENSMUSG00000024891	Slc29a2	Der12|Ent2|Hnp36	solute carrier family 29 (nucleoside transporters), member 2	protein-coding
unique_peak2-39746-6-9--0.75652998450706-1.11707584880836	chrUn_GL456367	987	1269	+	0	NA	NA	NA	NA	NA								
common_peak1-9436-17-8-1.04837133676273-1.30305656033811	chr11	102229665	102230242	+	0	NA	Intergenic	Intergenic	-3358	NM_011403	20533	Mm.7248	NM_011403	ENSMUSG00000006574	Slc4a1	Ae1|CD233|Empb3|l11Jus51	solute carrier family 4 (anion exchanger), member 1	protein-coding
unique_peak2-32559-9-8-0.0196884049619079-1.03275496310833	chr1	75247666	75248109	+	0	NA	intron (NM_008985, intron 19 of 22)	intron (NM_008985, intron 19 of 22)	12896	NM_008985	19275	Mm.2902	NM_008985	ENSMUSG00000026204	Ptprn	IA-2|mIA-A|mKIAA4064	protein tyrosine phosphatase, receptor type, N	protein-coding
unique_peak1-3711-9-1-2.18961340640422-2.31132995230379	chr19	44422706	44423207	+	0	NA	Intergenic	Intergenic	15140	NM_183216	329065	Mm.313583	NM_183216	ENSMUSG00000050195	Scd4	ACOD4	stearoyl-coenzyme A desaturase 4	protein-coding
common_peak1-8450-22-24-0.00342791531268016-0.305461879681376	chr10	79840840	79841733	+	0	NA	Intergenic	Intergenic	9110	NM_198615	237400	Mm.268389	NM_198615	ENSMUSG00000048696	Mex3d	BC059858|Rkhd1	mex3 homolog D (C. elegans)	protein-coding
common_peak2-24974-14-9-0.577288065470282-0.630231561310125	chr18	6282044	6282557	+	0	NA	Intergenic	Intergenic	-40778	NM_008448	16573	Mm.223744	NM_008448	ENSMUSG00000006740	Kif5b	AL022807|Khc|Khcs|Kns1|Ukhc	kinesin family member 5B	protein-coding
common_peak2-31723-65-103--0.208273778663965-0.491318514483967	chr9	7836130	7837954	+	0	NA	Intergenic	CpG	-1787	NM_007465	11797	Mm.335659	NM_007465	ENSMUSG00000057367	Birc2	AW146227|Api1|Api2|Birc3|HIAP1|HIAP2|IAP1|IAP2|MIAP1|MIAP2|MIHB|MIHC|RNF48|cIAP1|cIAP2|mcIAP1	baculoviral IAP repeat-containing 2	protein-coding
unique_peak1-7119-12-7-0.648775985087639-0.697979855752659	chr9	46110718	46111234	+	0	NA	TTS (NM_183104)	TTS (NM_183104)	17093	NM_183104	74361	Mm.159169	NM_183104	ENSMUSG00000056617	4931429L15Rik	-	RIKEN cDNA 4931429L15 gene	protein-coding
common_peak2-24798-39-7-2.61576124691915-7.99547444199666	chr17	66268513	66269119	+	0	NA	Intergenic	Intergenic	31711	NM_023053	65960	Mm.10153	NM_023053	ENSMUSG00000024098	Twsg1	1810013J15Rik|9030422N06Rik|AW552143|D17Ertd403e|Tsg|Twg	twisted gastrulation homolog 1 (Drosophila)	protein-coding
unique_peak2-32978-6-6--0.241956811677302-0.947717972411649	chr10	59222235	59222646	+	0	NA	intron (NM_001291443, intron 6 of 12)	intron (NM_001291443, intron 6 of 12)	57129	NM_001291443	216001	Mm.27199	NM_144822	ENSMUSG00000020111	Micu1	C730016L05Rik|Calc|Cbara1	mitochondrial calcium uptake 1	protein-coding
unique_peak2-39684-3-10--1.87341470859657-1.75805390616669	chr9	108936653	108937144	+	0	NA	Intergenic	Intergenic	-4183	NM_025858	66940	Mm.196533	NM_025858	ENSMUSG00000025647	Shisa5	2310008D10Rik|6430628I05Rik|Scotin|mShisa5	shisa homolog 5 (Xenopus laevis)	protein-coding
unique_peak1-5924-13-4-1.45654393575041-2.23384849113406	chr6	89382076	89382750	+	0	NA	intron (NM_001167736, intron 4 of 6)	intron (NM_001167736, intron 4 of 6)	-69806	NM_008881	18844	Mm.3789	NM_008881	ENSMUSG00000030084	Plxna1	2600013D04Rik|NOV|PlexA1|Plxn1|mKIAA4053	plexin A1	protein-coding
unique_peak2-36439-5-13--1.51173525806346-1.78669045979184	chr2	132252774	132253169	+	0	NA	intron (NR_045802, intron 1 of 3)	intron (NR_045802, intron 1 of 3)	2494	NR_045802	70845	Mm.158461	NR_045802	ENSMUSG00000027345	4921508D12Rik	-	RIKEN cDNA 4921508D12 gene	ncRNA
common_peak2-21046-20-12-0.787635066450101-0.949240599462708	chr11	40446556	40447307	+	0	NA	Intergenic	Intergenic	59253	NM_134017	108645	Mm.293771	NM_134017	ENSMUSG00000042032	Mat2b	1110064C04Rik|2410018D16Rik|AI182287|AU022853|MAT-II|MATIIbeta|TGR	methionine adenosyltransferase II, beta	protein-coding
unique_peak2-34646-5-6--0.511735258063458-0.947717972411649	chr14	105731034	105731460	+	0	NA	Intergenic	B3|SINE|B2	73357	NM_001190989	76273	Mm.290669	NM_029561	ENSMUSG00000053253	Ndfip2	0710001O20Rik|2810436B12Rik|9130207N19Rik|N4wbp5a|mKIAA1165	Nedd4 family interacting protein 2	protein-coding
common_peak1-18095-30-38--0.115726809370376-0.312769113767451	chr8	111033766	111034589	+	0	NA	Intergenic	MTD|LTR|MaLR	74400	NR_077224	109215	Mm.65282	NR_077224		3010033K07Rik	-	RIKEN cDNA 3010033K07 gene	ncRNA
common_peak2-31043-8-11--0.579740082773585-1.14218153353838	chr8	14818411	14818963	+	0	NA	intron (NM_172910, intron 9 of 15)	intron (NM_172910, intron 9 of 15)	-69849	NM_012000	26889	Mm.254027	NM_012000	ENSMUSG00000026317	Cln8	mnd	ceroid-lipofuscinosis, neuronal 8	protein-coding
unique_peak1-1757-8-0-3.00522241794757-2.70926996097583	chr13	108776466	108776940	+	0	NA	Intergenic	MTD|LTR|MaLR	-57965	NM_001048250	75616	Mm.491164	NM_001048250		Smim15	2810008M24Rik	small integral membrane protein 15	protein-coding
common_peak2-28529-8-8--0.164702583494742-1.00793137938329	chr5	130170632	130171075	+	0	NA	intron (NM_172462, intron 1 of 2)	B1F1|SINE|Alu	5110	NM_172462	22648	Mm.135067	NM_172462	ENSMUSG00000051034	Zfp11	6720465D24|Krox-6|Zfp-11	zinc finger protein 11	protein-coding
common_peak1-7668-13-10-0.319040412000471-0.446472590016315	chr1	75214401	75214984	+	0	NA	intron (NM_009447, intron 1 of 3)	intron (NM_009447, intron 1 of 3)	1136	NM_009447	22145	Mm.1155	NM_009447	ENSMUSG00000026202	Tuba4a	M[a]4|Tuba4	tubulin, alpha 4A	protein-coding
common_peak1-15527-22-13-0.8399291830298-1.1381569562463	chr4	118229723	118230567	+	0	NA	intron (NM_026789, intron 21 of 21)	intron (NM_026789, intron 21 of 21)	-13814	NM_172383	230678	Mm.23639	NM_172383	ENSMUSG00000050854	Tmem125	6330530A05Rik|AV223516	transmembrane protein 125	protein-coding
common_peak1-18713-8-13--0.802132504110034-0.562038191119711	chr8	122611535	122612046	+	0	NA	exon (NM_133967, exon 3 of 8)	exon (NM_133967, exon 3 of 8)	13582	NM_133967	102193	Mm.240076	NM_133967	ENSMUSG00000031823	Zdhhc7	AL024087|Gramp2	zinc finger, DHHC domain containing 7	protein-coding
common_peak2-26906-18-8-1.14299414978604-1.45476480588849	chr2	160075864	160076371	+	0	NA	Intergenic	Intergenic	77113	NM_001033411	329554	Mm.291144	NM_001033411		Gm826	-	predicted gene 826	protein-coding
common_peak2-23087-12-9-0.326847890200276-0.459837087125828	chr14	76477934	76478395	+	0	NA	Intergenic	Intergenic	32458	NM_026177	67467	Mm.260767	NM_026177	ENSMUSG00000022008	Gpalpp1	1200011I18Rik|Kiaa1704	GPALPP motifs containing 1	protein-coding
unique_peak1-768-8-3-1.00522241794757-1.39487600375387	chr10	122678654	122679189	+	0	NA	Intergenic	MTE-int|LTR|MaLR	-22211	NM_182807	268354	Mm.51939	NM_182807	ENSMUSG00000044071	Fam19a2	6330575M02|FAM19A2 TAFA-2|TAFA2|Tafa-2	family with sequence similarity 19, member A2	protein-coding
common_peak1-9637-19-20-0.0103699038829257-0.306326795069978	chr12	54312848	54313716	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-36382	NM_013780	27386	Mm.247044	NM_013780	ENSMUSG00000021010	Npas3	4930423H22Rik|bHLHe12	neuronal PAS domain protein 3	protein-coding
common_peak1-14671-81-213--0.869417383392581-6.45392976182705	chr3	60500202	60502251	+	0	NA	Intergenic	L1Md_T|LINE|L1	196052	NM_001253708	56758	Mm.255723	NM_020007	ENSMUSG00000027763	Mbnl1	Mbnl|mKIAA0428	muscleblind-like 1 (Drosophila)	protein-coding
common_peak2-27280-25-21-0.402418286707809-0.580176690544129	chr3	57446900	57447927	+	0	NA	TTS (NM_175095)	TTS (NM_175095)	8193	NM_175095	52245	Mm.21901	NM_175095		Commd2	1190017G07Rik|AI047739|D3Ertd176e|HSPC042	COMM domain containing 2	protein-coding
unique_peak2-35805-8-7-0.00522241794757061-1.00793137938329	chr18	61236367	61236849	+	0	NA	intron (NM_001146268, intron 15 of 22)	intron (NM_001146268, intron 15 of 22)	-28618	NM_001037859	12978	Mm.22574	NM_007779	ENSMUSG00000024621	Csf1r	AI323359|CD115|CSF-1R|Csfmr|Fim-2|Fms|M-CSF-R|M-CSFR	colony stimulating factor 1 receptor	protein-coding
common_peak1-11540-50-53-0.286052814315484-0.610031908571722	chr16	4879326	4880552	+	0	NA	promoter-TSS (NM_145359)	promoter-TSS (NM_145359)	-88	NM_145359	207740	Mm.268895	NM_145359		Ubald1	1500031H01Rik|BC013706|Fam100a	UBA-like domain containing 1	protein-coding
common_peak1-10751-19-14-0.495796731053168-0.607095980551316	chr14	69812651	69813650	+	0	NA	TTS (NM_010921)	TTS (NM_010921)	4401	NM_010921	18095	Mm.3520	NM_010921	ENSMUSG00000022061	Nkx3-1	Bax|NKX3.1|NKX3A|Nkx-3.1|bagpipe	NK-3 transcription factor, locus 1 (Drosophila)	protein-coding
common_peak2-23753-22-22-0.123722149030391-0.342639663781856	chr15	97836569	97837331	+	0	NA	Intergenic	(CATATA)n|Simple_repeat|Simple_repeat	-1795	NM_001113515	12824	Mm.2423	NM_031163	ENSMUSG00000022483	Col2a1	Col2|Col2a|Col2a-1|Del1|Dmm|Lpk|M100856|Rgsc856	collagen, type II, alpha 1	protein-coding
unique_peak2-37902-1-7--2.62705701021674-1.80617997398389	chr5	142444682	142445117	+	0	NA	intron (NM_177879, intron 13 of 44)	intron (NM_177879, intron 13 of 44)	-432552	NM_199068	17425	Mm.24214	NM_010812	ENSMUSG00000056493	Foxk1	A630048H08Rik|AI463295|ENSMUSG00000075577|Gm10868|Mnf	forkhead box K1	protein-coding
unique_peak2-34985-10-21--1.10301627362853-1.16735254179725	chr15	99099159	99099922	+	0	NA	Intergenic	Intergenic	-17148	NM_016766	51812	Mm.383472	NM_016766	ENSMUSG00000037570	Mcrs1	C78274|ICP22BP|MSP58|P78	microspherule protein 1	protein-coding
common_peak1-10051-33-64--0.691030250502926-1.51460024573214	chr13	19618978	19620027	+	0	NA	Intergenic	Lx4B|LINE|L1	92197	NM_134065	105298	Mm.275054	NM_134065	ENSMUSG00000002808	Epdr1	AU040950|AV006210|Epdm2|Epdr2|MERP-1|MERP-2|MERP2|Ucc1	ependymin related protein 1 (zebrafish)	protein-coding
unique_peak2-37330-4-15--2.02346051385325-2.4322161449009	chr4	130173751	130174498	+	0	NA	Intergenic	Intergenic	-45150	NM_030722	80912	Mm.440206	NM_030722	ENSMUSG00000028580	Pum1	AA517475|Pumm|mKIAA0099	pumilio RNA-binding family member 1	protein-coding
common_peak2-22567-4-10--1.48289213249054-1.5150158574804	chr13	63564296	63564885	+	0	NA	Intergenic	Intergenic	-31537	NM_001282942	14088	Mm.126106	NM_007985	ENSMUSG00000021461	Fancc	Facc	Fanconi anemia, complementation group C	protein-coding
unique_peak1-7027-8-1-2.00522241794757-2.05605744720049	chr8	126677460	126677939	+	0	NA	Intergenic	ORR1A2|LTR|MaLR	-77595	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
common_peak2-29620-27-22-0.467983994838223-0.705485015404196	chr6	54203589	54204703	+	0	NA	intron (NM_001163640, intron 6 of 12)	intron (NM_001163640, intron 6 of 12)	-18670	NM_023543	69993	Mm.321147	NM_023543	ENSMUSG00000004633	Chn2	1700026N20Rik|4930557O16Rik|ARHGAP3|Bch	chimerin 2	protein-coding
common_peak1-11685-18-9-0.990991056340989-1.23014042908325	chr16	30188913	30189710	+	0	NA	Intergenic	Intergenic	78307	NM_027904	71756	Mm.290614	NM_027904	ENSMUSG00000023176	Cpn2	1300018K11Rik	carboxypeptidase N, polypeptide 2	protein-coding
common_peak2-30375-20-20-0.0957573618124323-0.321718508207528	chr7	28951330	28952106	+	0	NA	Intergenic	RMER20A|LTR|ERVK	-3049	NM_007991	14113	Mm.4595	NM_007991	ENSMUSG00000046865	Fbl	AL022665|FIB|FLRN|RNU3IP1	fibrillarin	protein-coding
common_peak2-30798-21-39--0.752438829621127-1.08405458203116	chr7	127406180	127406962	+	0	NA	intron (NM_026458, intron 19 of 30)	L1M3|LINE|L1	59093	NM_026458	67928	Mm.158178	NM_026458	ENSMUSG00000062017	Abca14	1700110B15Rik|4930539G24Rik	ATP-binding cassette, sub-family A (ABC1), member 14	protein-coding
unique_peak1-7170-11-6-0.701338662194009-1.32595962126035	chr9	60794394	60795080	+	0	NA	Intergenic	MER5A1|DNA|MER1_type	-70139	NR_040767	330956	Mm.207985	NR_040767		Gm5122	A430102L10	predicted gene 5122	ncRNA
common_peak2-26956-51-73--0.134529540026377-0.356884963416664	chr2	165034019	165035022	+	0	NA	intron (NM_174988, intron 1 of 11)	intron (NM_174988, intron 1 of 11)	25717	NM_174988	104010	Mm.151819	NM_174988	ENSMUSG00000053166	Cdh22	-	cadherin 22	protein-coding
common_peak2-26979-52-16-2.02079714901536-8.03447792475293	chr2	167543559	167544331	+	0	NA	Intergenic	(CCAA)n|Simple_repeat|Simple_repeat	27268	NR_015500	329562	Mm.123101	NM_177851	ENSMUSG00000006462	A530013C23Rik	-	RIKEN cDNA A530013C23 gene	ncRNA
unique_peak2-35445-8-7-0.00522241794757061-1.00793137938329	chr17	35548630	35548975	+	0	NA	Intergenic	MERVL_2A-int|LTR|ERVL	-12990	NM_023124	15019	Mm.486287	NM_023124		H2-Q8	H-2Q8|MMS10-T|Ms10t|Qa-2|Qa-8|Qa8	histocompatibility 2, Q region locus 8	protein-coding
unique_peak2-33223-4-9--1.34538860874061-1.36011389749466	chr10	120112617	120112991	+	0	NA	Intergenic	Intergenic	-89984	NR_038000	70874	Mm.427286	NR_038000	ENSMUSG00000044544	4921513I03Rik	-	RIKEN cDNA 4921513I03 gene	ncRNA
unique_peak1-4895-9-0-3.18961340640422-3.01029995663981	chr4	45132923	45133478	+	0	NA	Intergenic	RSINE1|SINE|B4	-12215	NM_001099675	68512	Mm.282081	NM_001099675	ENSMUSG00000078713	Tomm5	1110019J04Rik|Tom5	translocase of outer mitochondrial membrane 5 homolog (yeast)	protein-coding
common_peak2-21284-29-27-0.304935158557507-0.525808162491371	chr11	70459113	70459990	+	0	NA	intron (NM_024211, intron 2 of 7)	intron (NM_024211, intron 2 of 7)	990	NM_024211	67863	Mm.296082	NM_024211	ENSMUSG00000014606	Slc25a11	2310022P18Rik|2oxoc	solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11	protein-coding
common_peak1-10658-10-7-0.356415345008769-1.12966497611638	chr14	48279060	48279577	+	0	NA	intron (NM_001293636, intron 2 of 39)	B1_Mus2|SINE|Alu	-4113	NM_008477	16709	Mm.3110	NM_008477	ENSMUSG00000021843	Ktn1	-	kinectin 1	protein-coding
common_peak2-20212-26-34--0.201383924786504-0.35535220421655	chr1	179042290	179043076	+	0	NA	intron (NM_011785, intron 2 of 12)	intron (NM_011785, intron 2 of 12)	136215	NM_011785	23797	Mm.235194	NM_011785	ENSMUSG00000019699	Akt3	AI851531|D930002M15Rik|Nmf350	thymoma viral proto-oncogene 3	protein-coding
common_peak2-21275-11-10-0.0492619656143161-0.31137425193576	chr11	69981201	69981648	+	0	NA	5' UTR (NM_001204252, exon 2 of 10)	5' UTR (NM_001204252, exon 2 of 10)	1299	NM_010796	17312	Mm.252405	NM_010796	ENSMUSG00000000318	Clec10a	CD301a|M-ASGP-BP-1|Mgl|Mgl1	C-type lectin domain family 10, member A	protein-coding
common_peak2-26029-118-126-0.535107996350409-2.67137168144124	chr19	60789811	60791608	+	0	NA	Intergenic	Intergenic	-41181	NM_178421	332397	Mm.186390	NM_178421	ENSMUSG00000072437	Nanos1	-	nanos homolog 1 (Drosophila)	protein-coding
common_peak2-21085-9-14--0.717277189204299-0.53895475198017	chr11	50827392	50827712	+	0	NA	Intergenic	Intergenic	7076	NM_146909	18351	Mm.246541	NM_146909	ENSMUSG00000060918	Olfr51	ID7|MOR129-3	olfactory receptor 51	protein-coding
common_peak2-26409-12-13--0.158578936969966-0.301029995663979	chr2	59438587	59439256	+	0	NA	Intergenic	Intergenic	-11178	NM_198294	66860	Mm.27917	NM_198294	ENSMUSG00000035168	Tanc1	1200003E16Rik|Tanc|mKIAA1728	tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1	protein-coding
common_peak1-8318-16-27--0.689091279789542-0.798885335210229	chr10	42277871	42278490	+	0	NA	Intergenic	Intergenic	25214	NM_152229	21907	Mm.287100	NM_152229	ENSMUSG00000019803	Nr2e1	Mtl1|Mtll|TLL|Tlx|XTLL|fierce|frc|tailless	nuclear receptor subfamily 2, group E, member 1	protein-coding
common_peak2-20040-79-132--0.22644726832457-0.587284553102199	chr1	138963000	138964282	+	0	NA	Intergenic	MERVL-int|LTR|ERVL	-106616	NM_030676	26424	Mm.16794	NM_030676	ENSMUSG00000026398	Nr5a2	AU020803|D1Ertd308e|Ftf|LRH-1|UF2-H3B	nuclear receptor subfamily 5, group A, member 2	protein-coding
common_peak2-20047-14-18--0.348711353085941-0.360333814299795	chr1	143777179	143777935	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-1224578	NR_040604	75910	Mm.483845	NR_040604		4930590L20Rik	-	RIKEN cDNA 4930590L20 gene	ncRNA
unique_peak2-34716-0-5--3.42509343119537-1.32905871926422	chr15	35417699	35418048	+	0	NA	intron (NM_177151, intron 17 of 61)	RMER1B|Other|Other	116572	NM_177151	666173	Mm.309250	NM_177151	ENSMUSG00000037646	Vps13b	1810042B05Rik|2310042E16Rik|4732488H20|C330002D13Rik|C87206|Coh1|D230005K13|mKIAA0532|mKIAA5032	vacuolar protein sorting 13B (yeast)	protein-coding
unique_peak2-33744-6-8--0.60452689106201-1.03789460276074	chr11	117081292	117081767	+	0	NA	intron (NM_001113486, intron 2 of 11)	intron (NM_001113486, intron 2 of 11)	20554	NM_001113486	53860	Mm.38450	NM_017380	ENSMUSG00000059248	Sept9	MSF1|Msf|PNUTL4|Sint1	septin 9	protein-coding
common_peak1-14218-9-9--0.132314688483142-1.03275496310833	chr2	151572715	151573265	+	0	NA	Intergenic	MTD|LTR|MaLR	-5961	NM_212446	228769	Mm.146984	NM_144889	ENSMUSG00000032869	Psmf1	AW048666|BC012260|PI31	proteasome (prosome, macropain) inhibitor subunit 1	protein-coding
common_peak1-11841-22-31--0.352715894912595-0.440892966163086	chr16	87454431	87455363	+	0	NA	promoter-TSS (NM_024258)	promoter-TSS (NM_024258)	-333	NM_024258	74112	Mm.152941	NM_024258	ENSMUSG00000025616	Usp16	1200004E02Rik|2810483I07Rik|6330514E22Rik|UBPM	ubiquitin specific peptidase 16	protein-coding
unique_peak1-31-21-5-1.98452676454508-3.24127775360835	chr1	12775972	12777059	+	0	NA	intron (NM_001198566, intron 2 of 20)	intron (NM_001198566, intron 2 of 20)	67889	NM_172294	240725	Mm.45563	NM_172294	ENSMUSG00000016918	Sulf1	AI467640|AW121680|mKIAA1077	sulfatase 1	protein-coding
unique_peak1-3798-10-5-0.771452844287613-1.33892459842472	chr19	58396079	58396608	+	0	NA	intron (NM_001285457, intron 3 of 8)	intron (NM_001285457, intron 3 of 8)	25649	NR_040449	791347	Mm.452208	NR_040449		Gm10007	ENSMUSG00000056739	predicted gene 10007	ncRNA
unique_peak2-33169-11-8-0.338768582809301-1.14218153353838	chr10	94829387	94829928	+	0	NA	Intergenic	L1MA4|LINE|L1	30747	NR_045337	69629	Mm.250542	NR_045337		2310039L15Rik	-	RIKEN cDNA 2310039L15 gene	ncRNA
common_peak2-21780-17-21--0.24113528043226-0.322753776620787	chr11	117536201	117537282	+	0	NA	intron (NM_198022, intron 1 of 21)	intron (NM_198022, intron 1 of 21)	21138	NM_198022	217351	Mm.40272	NM_198022	ENSMUSG00000025571	Tnrc6c	9930033H14Rik|mKIAA1582	trinucleotide repeat containing 6C	protein-coding
common_peak1-18215-12-6-0.841421063030034-1.58711810488664	chr8	25010979	25011630	+	0	NA	intron (NM_001277239, intron 4 of 7)	intron (NM_001277239, intron 4 of 7)	231171	NM_177086	320158	Mm.121274	NM_177086	ENSMUSG00000037492	Zmat4	9630048M01Rik	zinc finger, matrin type 4	protein-coding
common_peak2-29571-23-11-1.13680500378792-1.66030262873422	chr6	47781186	47781747	+	0	NA	promoter-TSS (NM_177882)	promoter-TSS (NM_177882)	-962	NM_177882	330301	Mm.128149	NM_177882	ENSMUSG00000051499	Zfp786	A730012O14Rik|Znf786	zinc finger protein 786	protein-coding
common_peak2-28960-47-61--0.0193548856203272-0.301029995663994	chr5	102069071	102070241	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	24074	NM_144955	18096	Mm.193072	NM_144955		Nkx6-1	NKX6A|Nkx6.1	NK6 homeobox 1	protein-coding
unique_peak2-38271-5-6--0.511735258063458-0.947717972411649	chr6	128550584	128551017	+	0	NA	Intergenic	Intergenic	-19176	NM_001001179	232400	Mm.259234	NM_001001179	ENSMUSG00000047228	BC048546	Ovos	cDNA sequence BC048546	protein-coding
common_peak2-27741-16-22--0.405298313788951-0.440610794044987	chr3	126827348	126828196	+	0	NA	Intergenic	Intergenic	-36451	NR_105030	100862268	Mm.444603	NR_105029	ENSMUSG00000097456	LOC100862268	-	uncharacterized LOC100862268	ncRNA
common_peak1-9828-13-8-0.608547029195456-0.660903317613904	chr12	73053793	73054554	+	0	NA	intron (NM_001286452, intron 15 of 24)	intron (NM_001286452, intron 15 of 24)	63643	NM_001286452	208846	Mm.87417	NM_026102	ENSMUSG00000034574	Daam1	-	dishevelled associated activator of morphogenesis 1	protein-coding
common_peak2-24176-23-31--0.278232495490919-0.396392531282608	chr16	46496292	46497136	+	0	NA	intron (NM_021495, intron 1 of 5)	CpG	366	NM_021496	58998	Mm.328072	NM_021495	ENSMUSG00000022656	Pvrl3	2610301B19Rik|3000002N23Rik|4921513D19Rik|AA407785|AU016832|AW538082|CD113	poliovirus receptor-related 3	protein-coding
common_peak2-30975-13-8-0.608547029195456-0.660903317613904	chr8	3411178	3411727	+	0	NA	intron (NM_133962, intron 1 of 19)	B1_Mus2|SINE|Alu	18444	NM_133962	102098	Mm.170461	NM_133962	ENSMUSG00000004568	Arhgef18	AI467246|D030053O22Rik	rho/rac guanine nucleotide exchange factor (GEF) 18	protein-coding
common_peak2-24483-51-78--0.22885692257453-0.482409833682749	chr17	24719094	24720931	+	0	NA	intron (NM_013630, intron 26 of 45)	L1_Mus3|LINE|L1	33117	NM_013630	18763	Mm.30435	NM_013630	ENSMUSG00000032855	Pkd1	PC1|mFLJ00285	polycystic kidney disease 1 homolog	protein-coding
unique_peak2-38718-6-11--1.01956439034085-1.32595962126035	chr7	111122835	111123345	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-4600	NM_147118	259122	Mm.377860	NM_147118	ENSMUSG00000094520	Olfr635	MOR5-2	olfactory receptor 635	protein-coding
unique_peak1-29-16-6-1.31090872021046-1.49151883326344	chr1	10899186	10899834	+	0	NA	Intergenic	L1Md_A|LINE|L1	-84036	NM_029525	109294	Mm.123247	NM_029525	ENSMUSG00000048960	Prex2	6230420N16Rik|AI316880|AI553603|C030045D06Rik|D430013K02|Depdc2|P-Rex2	phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2	protein-coding
common_peak1-10942-111-223--0.389661130647435-1.7956562247946	chr15	12321251	12322496	+	0	NA	intron (NM_001081064, intron 13 of 23)	L1_Mus1|LINE|L1	70622	NM_025673	66629	Mm.157655	NM_025673	ENSMUSG00000022200	Golph3	4733401N08Rik|5730410D03Rik|AW413496	golgi phosphoprotein 3	protein-coding
common_peak2-21465-42-14-1.83543873225867-5.75551916672625	chr11	87422501	87423150	+	0	NA	intron (NM_133215, intron 15 of 18)	intron (NM_133215, intron 15 of 18)	-7841	NM_001045527	327992	Mm.390371	NM_001045527	ENSMUSG00000070345	Hsf5	Gm739|MLZ-220	heat shock transcription factor family member 5	protein-coding
common_peak1-17723-12-8-0.478850983645327-0.562038191119709	chr7	80057149	80057846	+	0	NA	Intergenic	MLT1C|LTR|MaLR	189457	NR_046024	625243	Mm.261798	NR_046024		Gm6567	-	predicted gene 6567	ncRNA
common_peak2-32142-11-12--0.191746133889479-0.310474156842889	chr9	107626973	107627473	+	0	NA	Intergenic	Intergenic	-14417	NM_011349	20350	Mm.12903	NM_011349	ENSMUSG00000034684	Sema3f	Sema4|Semak	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F	protein-coding
unique_peak2-37702-2-7--1.91745425626332-1.45399745587252	chr5	103376626	103377062	+	0	NA	intron (NM_001081567, intron 11 of 13)	intron (NM_001081567, intron 11 of 13)	179015	NM_001286468	231532	Mm.440191	NM_029270	ENSMUSG00000057315	Arhgap24	0610025G21Rik	Rho GTPase activating protein 24	protein-coding
common_peak1-17812-9-10--0.269818212233077-1.05503135781948	chr7	101663699	101664210	+	0	NA	Intergenic	Intergenic	1435565	NM_021427	58238	Mm.113787	NM_021427		Fam181b	A830059I20Rik|AB041569	family with sequence similarity 181, member B	protein-coding
unique_peak2-39249-0-4--3.16205902536157-1.10720996964787	chr8	117060850	117061179	+	0	NA	intron (NM_019573, intron 5 of 8)	intron (NM_019573, intron 5 of 8)	97462	NM_019573	80707	Mm.440420	NM_019573	ENSMUSG00000004637	Wwox	5330426P09Rik|9030416C10Rik|WOX1	WW domain-containing oxidoreductase	protein-coding
unique_peak2-39025-12-21--0.810655633549659-0.713635438203849	chr8	61342328	61343040	+	0	NA	intron (NM_175032, intron 1 of 11)	intron (NM_175032, intron 1 of 11)	47740	NM_175032	270049	Mm.236368	NM_175032		Galntl6	1700021K10Rik|4930431L04Rik|A830023L05	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6	protein-coding
common_peak1-12439-8-8--0.164702583494742-1.00793137938329	chr17	79598715	79599224	+	0	NA	Intergenic	Intergenic	147723	NM_027455	70536	Mm.293870	NM_027455	ENSMUSG00000024084	Qpct	5730422A13Rik	glutaminyl-peptide cyclotransferase (glutaminyl cyclase)	protein-coding
common_peak1-11962-36-32-0.434926966809301-0.779916249636873	chr17	6476448	6477362	+	0	NA	Intergenic	Intergenic	-26763	NR_033520	547127	Mm.297552	NM_001045538		Tmem181b-ps	Tmem181b	transmembrane protein 181B, pseudogene	pseudo
common_peak1-13119-17-11-0.633333837483882-0.769930178837768	chr19	8953892	8954516	+	0	NA	TTS (NM_001160356)	TTS (NM_001160356)	1219	NM_001160356	107197	Mm.381181	NM_001160356	ENSMUSG00000071654	Uqcc3	AI462493|Cbp4	ubiquinol-cytochrome c reductase complex assembly factor 3	protein-coding
common_peak1-10420-19-14-0.495796731053168-0.607095980551316	chr13	98890262	98891114	+	0	NA	intron (NM_012026, intron 2 of 35)	intron (NM_012026, intron 2 of 35)	85432	NM_012026	110596	Mm.252718	NM_012026	ENSMUSG00000021662	Arhgef28	9230110L08Rik|AI323540|D13Bwg1089e|RIP2|Rgnef|RhoGEF|Rhoip2|p190RhoGEF	Rho guanine nucleotide exchange factor (GEF) 28	protein-coding
common_peak2-22270-8-11--0.579740082773585-1.14218153353838	chr13	6193916	6194438	+	0	NA	Intergenic	GA-rich|Low_complexity|Low_complexity	333442	NM_011803	23849	Mm.275036	NM_011803	ENSMUSG00000000078	Klf6	AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9	Kruppel-like factor 6	protein-coding
unique_peak2-33650-7-13--1.00826409175941-0.697979855752659	chr11	99077258	99077881	+	0	NA	intron (NM_020618, intron 7 of 10)	intron (NM_020618, intron 7 of 10)	14762	NM_020618	57376	Mm.379086	NM_020618	ENSMUSG00000037935	Smarce1	2810417B20Rik|5830412H02Rik|9030408N19Rik|Baf27	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	protein-coding
unique_peak1-5065-9-5-0.604650905683064-1.21398586181642	chr4	139146969	139147481	+	0	NA	intron (NM_001205173, intron 1 of 8)	intron (NM_001205173, intron 1 of 8)	16590	NM_001205173	212632	Mm.30464	NM_183148	ENSMUSG00000041025	Iffo2	C79267	intermediate filament family orphan 2	protein-coding
common_peak1-17638-10-4-1.03448725012141-1.5150158574804	chr7	49326496	49327085	+	0	NA	Intergenic	Intergenic	-12439	NM_001105056	628444	Mm.469901	NM_001105056	ENSMUSG00000092032	Vmn2r59	EG628444	vomeronasal 2, receptor 59	protein-coding
common_peak1-11350-23-28--0.136213490618491-0.317118655902079	chr15	88867682	88868896	+	0	NA	intron (NM_031260, intron 22 of 26)	IAPEz-int|LTR|ERVK	-21867	NM_001002005	406218	Mm.483059	NM_001002005	ENSMUSG00000058441	Panx2	-	pannexin 2	protein-coding
unique_peak2-36555-4-14--1.93035110946177-2.23384849113406	chr2	167946695	167947295	+	0	NA	Intergenic	Intergenic	33018	NR_040327	77017	Mm.407822	NR_040327	ENSMUSG00000087648	E130018N17Rik	-	RIKEN cDNA E130018N17 gene	ncRNA
unique_peak1-1541-14-8-0.729291158915332-0.771068449301682	chr13	20180498	20181218	+	0	NA	Intergenic	Lx7|LINE|L1	-1518	NM_080288	140580	Mm.342392	NM_080288	ENSMUSG00000041112	Elmo1	6330578D22Rik|C230095H21Rik|CED-12	engulfment and cell motility 1	protein-coding
common_peak2-20238-73-71-0.522470004982909-1.58625694371143	chr1	182340748	182341856	+	0	NA	intron (NM_001081175, intron 2 of 7)	intron (NM_001081175, intron 2 of 7)	72333	NM_001081227	381310	Mm.44791	NM_001081227	ENSMUSG00000053963	6330403A02Rik	ENSMUSG00000056615|Gm10001|R75555	RIKEN cDNA 6330403A02 gene	protein-coding
common_peak2-26995-15-15-0.0121647505556561-0.30803596071496	chr2	168579511	168580308	+	0	NA	intron (NM_201396, intron 1 of 2)	intron (NM_201396, intron 1 of 2)	-12273	NM_001289446	11981	Mm.330819	NM_015731	ENSMUSG00000027546	Atp9a	IIa	ATPase, class II, type 9A	protein-coding
common_peak2-29865-9-11--0.395349094316936-0.344532117358383	chr6	108064932	108065345	+	0	NA	intron (NM_145937, intron 8 of 8)	intron (NM_145937, intron 8 of 8)	50099	NM_178391	74729	Mm.56539	NM_178391	ENSMUSG00000034639	Setmar	5830404F24Rik|Etet2	SET domain without mariner transposase fusion	protein-coding
unique_peak2-35842-3-7--1.41398308995928-1.23214870625617	chr18	70531637	70532068	+	0	NA	Intergenic	Intergenic	-100256	NM_029019	170461	Mm.83623	NM_029019	ENSMUSG00000079608	Stard6	1700011K09Rik|4833424I06Rik|4933429L05Rik|AI644424	StAR-related lipid transfer (START) domain containing 6	protein-coding
unique_peak2-36196-5-5--0.289342836727009-0.909929411522249	chr2	32428738	32429087	+	0	NA	3' UTR (NM_010073, exon 4 of 4)	3' UTR (NM_010073, exon 4 of 4)	-2427	NM_198191	227733	Mm.78923	NM_198191	ENSMUSG00000046854	Pip5kl1	BC028795	phosphatidylinositol-4-phosphate 5-kinase-like 1	protein-coding
common_peak1-14145-8-29--1.90166817766095-3.04993787975775	chr2	131909938	131910440	+	0	NA	intron (NM_018824, intron 5 of 15)	intron (NM_018824, intron 5 of 15)	-54465	NM_175445	215653	Mm.204737	NM_175445	ENSMUSG00000027339	Rassf2	3830431H01Rik|9030412M04Rik|AI852669|AW495050	Ras association (RalGDS/AF-6) domain family member 2	protein-coding
unique_peak2-36633-0-4--3.16205902536157-1.10720996964787	chr3	5574041	5574353	+	0	NA	intron (NM_001163305, intron 1 of 4)	intron (NM_001163305, intron 1 of 4)	2051	NM_001163301	19302	Mm.132336	NM_008994	ENSMUSG00000040374	Pex2	D3Ertd138e|PAF-1|PMP35|Pxmp3	peroxisomal biogenesis factor 2	protein-coding
unique_peak2-35032-9-8-0.0196884049619079-1.03275496310833	chr15	103323188	103323689	+	0	NA	intron (NM_153505, intron 29 of 30)	intron (NM_153505, intron 29 of 30)	-10027	NM_008800	18574	Mm.390792	NM_008800	ENSMUSG00000022489	Pde1b	Pde1b1	phosphodiesterase 1B, Ca2+-calmodulin dependent	protein-coding
common_peak1-12456-21-17-0.399564263823923-0.561823156887258	chr17	83731649	83732601	+	0	NA	Intergenic	PB1D7|SINE|Alu	-18146	NM_001114361	78798	Mm.295565	NM_199466	ENSMUSG00000032624	Eml4	4930443C24Rik|AI644019	echinoderm microtubule associated protein like 4	protein-coding
unique_peak2-33108-2-6--1.72480917832092-1.26211192963361	chr10	80987915	80988126	+	0	NA	Intergenic	Intergenic	-1050	NM_010304	14676	Mm.1546	NM_010304	ENSMUSG00000034792	Gna15	G[a]15|Galpha15	guanine nucleotide binding protein, alpha 15	protein-coding
common_peak2-28619-8-7-0.00522241794757061-1.00793137938329	chr5	24822041	24822310	+	0	NA	intron (NM_001081383, intron 35 of 58)	Lx3C|LINE|L1	93464	NM_144908	231050	Mm.246718	NM_144908	ENSMUSG00000038072	Galnt11	A430075I06Rik|AI648252|E430002F06Rik	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11	protein-coding
common_peak1-17858-9-7-0.18961340640422-1.05908390183068	chr7	113262923	113263443	+	0	NA	Intergenic	Lx5|LINE|L1	-40521	NR_030719	668108	Mm.429088	NR_030719		Gm8979	EG668108|Gm21884	very large inducible GTPase 1 pseudogene	pseudo
unique_peak2-35581-0-8--4.01005593191652-2.05605744720049	chr17	71782642	71783103	+	0	NA	intron (NM_028887, intron 11 of 47)	Lx7|LINE|L1	41811	NM_028887	74355	Mm.194450	NM_028887	ENSMUSG00000024054	Smchd1	4931400A14Rik|AW554188|MommeD1|mKIAA0650	SMC hinge domain containing 1	protein-coding
common_peak2-25674-16-14-0.211373046659543-0.364171515310935	chr19	10881870	10882324	+	0	NA	intron (NM_001037801, intron 1 of 11)	intron (NM_001037801, intron 1 of 11)	22451	NM_001037801	12511	Mm.290897	NM_009852	ENSMUSG00000024670	Cd6	-	CD6 antigen	protein-coding
common_peak2-23538-17-11-0.633333837483882-0.769930178837768	chr15	77907705	77908387	+	0	NA	intron (NM_007583, intron 1 of 3)	intron (NM_007583, intron 1 of 3)	41664	NM_007583	12300	Mm.277338	NM_007583		Cacng2	AW060990|B230105C07Rik|B930041E13Rik|stargazer|stargazin|stg|wag|waggler	calcium channel, voltage-dependent, gamma subunit 2	protein-coding
common_peak2-25376-52-98--0.52109662981391-1.40013126863755	chr18	84087153	84088814	+	0	NA	Intergenic	Intergenic	167971	NM_001081300	110796	Mm.102136	NM_001081300	ENSMUSG00000046982	Tshz1	5730407I04Rik|D18Bwg1409e|Mtsh1|NY-CO-33|Sdccag33|Tsh1|mKIAA4206|teashirt1	teashirt zinc finger family member 1	protein-coding
unique_peak2-35454-6-8--0.60452689106201-1.03789460276074	chr17	35869175	35869547	+	0	NA	Intergenic	RMER16|LTR|ERVK	-28277	NM_172962	12305	Mm.5021	NM_007584	ENSMUSG00000003534	Ddr1	6030432F18|AI323681|CD167a|Cak|Nep|PTK3A	discoidin domain receptor family, member 1	protein-coding
unique_peak2-34826-14-30--1.05498015002923-1.40782320807776	chr15	74999273	75000263	+	0	NA	Intergenic	L1Md_A|LINE|L1	-57389	NM_001099217	100041546	Mm.482110	NM_001099217	ENSMUSG00000022584	Ly6c2	Ly-6C.2|Ly-6C2	lymphocyte antigen 6 complex, locus C2	protein-coding
common_peak1-13348-21-7-1.56948926526624-2.44150343356329	chr19	44314679	44315536	+	0	NA	intron (NM_024450, intron 5 of 5)	MT2A|LTR|ERVL	37329	NM_024450	30049	Mm.480594	NM_024450	ENSMUSG00000025202	Scd3	4930513N16Rik	stearoyl-coenzyme A desaturase 3	protein-coding
common_peak1-10127-45-54-0.0789983118202118-0.332057628060234	chr13	32924099	32925388	+	0	NA	Intergenic	Intergenic	18311	NM_025429	66222	Mm.20144	NM_025429	ENSMUSG00000044734	Serpinb1a	1190005M04Rik|AI325983|EI|EIA|ELANH2|LEI|M/NEI|MNEI|PI2	serine (or cysteine) peptidase inhibitor, clade B, member 1a	protein-coding
unique_peak1-3544-11-0-3.50869358425161-3.61235994796777	chr19	23823083	23823730	+	0	NA	Intergenic	Intergenic	-9960	NM_177034	319924	Mm.22879	NM_177034	ENSMUSG00000024897	Apba1	6430513E09Rik|Lin-10|Mint|Mint1|Urop11|X11|X11alpha	amyloid beta (A4) precursor protein binding, family A, member 1	protein-coding
unique_peak1-3208-8-0-3.00522241794757-2.70926996097583	chr18	56738680	56739054	+	0	NA	intron (NM_019996, intron 2 of 4)	B2_Mm1t|SINE|B2	-6274	NM_001127338	110695	Mm.30250	NM_138600		Aldh7a1	Atq1|D18Wsu181e	aldehyde dehydrogenase family 7, member A1	protein-coding
common_peak1-16096-14-14--0.00767443525087419-0.308519316180257	chr5	64810630	64811217	+	0	NA	Intergenic	MTD-int|LTR|MaLR	48258	NR_040681	69999	Mm.261413	NR_040681		1700027F09Rik	-	RIKEN cDNA 1700027F09 gene	ncRNA
common_peak2-28990-41-49-0.0572925150739358-0.320382596085891	chr5	107868205	107869253	+	0	NA	intron (NM_001255991, intron 1 of 8)	intron (NM_001255991, intron 1 of 8)	1713	NM_001255991	100503185	Mm.366650	NM_001255991	ENSMUSG00000070632	Btbd8	EG627196|Gm16115|OTTMUSG00000030610	BTB (POZ) domain containing 8	protein-coding
common_peak1-13003-35-55--0.3759846635951-0.620905664975282	chr19	4614622	4615721	+	0	NA	5' UTR (NM_153388, exon 1 of 3)	5' UTR (NM_153388, exon 1 of 3)	496	NM_153388	225875	Mm.329675	NM_153388	ENSMUSG00000045045	Lrfn4	BC023156|Salm3	leucine rich repeat and fibronectin type III domain containing 4	protein-coding
common_peak1-11896-212-327-0.185091585968207-0.957908335025201	chr17	4993665	4997219	+	0	NA	exon (NM_001085355, exon 1 of 20)	exon (NM_001085355, exon 1 of 20)	368	NM_001085355	239985	Mm.133401	NM_001085355	ENSMUSG00000069729	Arid1b	8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235	AT rich interactive domain 1B (SWI-like)	protein-coding
common_peak1-17942-23-15-0.721767504509081-0.949797625454541	chr7	127470346	127471122	+	0	NA	Intergenic	Intergenic	-1464	NM_177213	320631	Mm.78330	NM_177213	ENSMUSG00000054746	Abca15	4930500I12Rik	ATP-binding cassette, sub-family A (ABC1), member 15	protein-coding
common_peak2-21559-52-64-0.0858921772372447-0.34185676619046	chr11	96976958	96977945	+	0	NA	promoter-TSS (NM_019507)	promoter-TSS (NM_019507)	-806	NM_019507	57765	Mm.94519	NM_019507	ENSMUSG00000001444	Tbx21	TBT1|Tbet|Tblym	T-box 21	protein-coding
common_peak1-12513-53-97--0.47373683169928-1.17831092014798	chr18	75366224	75368157	+	0	NA	intron (NM_027727, intron 14 of 16)	L1MA9|LINE|L1	89781	NR_045394	100503117	Mm.250517	NR_045393		2010010A06Rik	5033420E22Rik	RIKEN cDNA 2010010A06 gene	ncRNA
common_peak1-17324-14-9-0.577288065470282-0.630231561310125	chr6	145905622	145906422	+	0	NA	intron (NM_010656, intron 2 of 2)	intron (NM_010656, intron 2 of 2)	23355	NM_010656	16651	Mm.49689	NM_010656	ENSMUSG00000030255	Sspn	Krag	sarcospan	protein-coding
common_peak2-24166-13-12-0.0780323124966764-0.334470287753051	chr16	45158021	45158635	+	0	NA	promoter-TSS (NM_026402)	promoter-TSS (NM_026402)	458	NM_028756	74102	Mm.264984	NM_028756	ENSMUSG00000022664	Slc35a5	1010001J06Rik|AU021179|BB097433|D16Ertd450e|D730043G07Rik	solute carrier family 35, member A5	protein-coding
common_peak1-16086-36-20-1.08700366338899-2.44377456520723	chr5	64326549	64327856	+	0	NA	intron (NM_145923, intron 3 of 6)	intron (NM_145923, intron 3 of 6)	32934	NM_145923	100532	Mm.243632	NM_145923	ENSMUSG00000047881	Rell1	AA536743	RELT-like 1	protein-coding
common_peak1-17091-27-27-0.184191028837632-0.393151991482004	chr6	112889000	112889950	+	0	NA	intron (NM_080448, intron 1 of 21)	intron (NM_080448, intron 1 of 21)	7785	NM_080448	259302	Mm.236401	NM_080448	ENSMUSG00000030257	Srgap3	AI452337|Arhgap14|D130026O08Rik|Gbi|MEGAP|WRP|mKIAA0411	SLIT-ROBO Rho GTPase activating protein 3	protein-coding
common_peak1-19276-29-45--0.411271875441902-0.573175361577109	chr9	118040362	118041209	+	0	NA	intron (NM_026442, intron 1 of 3)	MMERVK10C-int|LTR|ERVK	18529	NM_026442	67899	Mm.9953	NM_026442	ENSMUSG00000039163	Cmc1	2010110K16Rik|2010312P05Rik|AI596001	COX assembly mitochondrial protein 1	protein-coding
unique_peak1-1691-11-2-1.92373108353046-2.32232533660526	chr13	75547423	75548039	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-234763	NR_030451	751556		NR_030451	miRBase:MI0004644	Mir682	Mirn682|mir-682|mmu-mir-682	microRNA 682	ncRNA
unique_peak1-3698-13-1-2.77847203063777-3.64038867156802	chr19	43885731	43886240	+	0	NA	intron (NM_013806, intron 13 of 31)	intron (NM_013806, intron 13 of 31)	-27308	NR_033472	100038628	Mm.212585	NR_033472	ENSMUSG00000074828	Gm10768	ENSMUSG00000074828	predicted gene 10768	ncRNA
common_peak2-31374-2-7--1.91745425626332-1.45399745587252	chr8	85037253	85037679	+	0	NA	Intergenic	L1Md_F|LINE|L1	-110981	NM_008357	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
unique_peak2-36605-7-10--0.660340788339108-1.12966497611638	chr2	178077845	178078395	+	0	NA	Intergenic	ORR1B2|LTR|MaLR	64243	NM_177191	320558	Mm.70781	NM_177191	ENSMUSG00000060445	Sycp2	3830402K23Rik|4930518F03Rik	synaptonemal complex protein 2	protein-coding
common_peak1-9968-10-5-0.771452844287613-1.33892459842472	chr12	112951629	112952130	+	0	NA	promoter-TSS (NM_027404)	promoter-TSS (NM_027404)	399	NM_026511	68020	Mm.425762	NM_026511	ENSMUSG00000037787	Apopt1	1700081D05Rik|2810002N01Rik|Apop-1|Apop1	apoptogenic, mitochondrial 1	protein-coding
unique_peak1-4513-9-3-1.18961340640422-1.57096726280955	chr3	25643849	25644414	+	0	NA	intron (NM_001163387, intron 3 of 5)	intron (NM_001163387, intron 3 of 5)	408098	NM_001163387	192167	Mm.316080	NM_138666	ENSMUSG00000063887	Nlgn1	6330415N05Rik|BB179718|NL1|Nlg1|mKIAA1070	neuroligin 1	protein-coding
common_peak1-16994-21-17-0.399564263823923-0.561823156887258	chr6	88084416	88085264	+	0	NA	Intergenic	Lx5|LINE|L1	-30588	NR_105795	102465196		NR_105795	miRBase:MI0021905	Mir6376	mmu-mir-6376	microRNA mir-6376	ncRNA
common_peak1-10604-9-5-0.604650905683064-1.21398586181642	chr14	31670600	31671115	+	0	NA	intron (NM_028839, intron 1 of 7)	intron (NM_028839, intron 1 of 7)	-21586	NM_181390	66175	Mm.220895	NM_181390	ENSMUSG00000042485	Mustn1	1110028G01Rik|Mustang	musculoskeletal, embryonic nuclear protein 1	protein-coding
common_peak2-21836-54-84--0.236305174507968-0.501671748198386	chr11	120597566	120598662	+	0	NA	Intergenic	RLTR26|LTR|ERVK	-4779	NM_007621	12409	Mm.21454	NM_007621	ENSMUSG00000025150	Cbr2	MLCR	carbonyl reductase 2	protein-coding
unique_peak1-5414-15-1-3.01216475055566-4.18809100057339	chr5	109557032	109557746	+	0	NA	Intergenic	L1Md_T|LINE|L1	-30506	NM_001104623	627569	Mm.469884	NM_001104623	ENSMUSG00000090688	Vmn2r12	EG627569|Gm6769	vomeronasal 2, receptor 12	protein-coding
common_peak1-15896-10-2-1.77145284428761-2.09384600808989	chr5	17505494	17505994	+	0	NA	intron (NM_001081143, intron 4 of 7)	AT_rich|Low_complexity|Low_complexity	37356	NM_001081143	242851	Mm.332230	NM_001081143	ENSMUSG00000028777	Gnat3	Ggust|Gtn	guanine nucleotide binding protein, alpha transducing 3	protein-coding
common_peak1-9661-13-29--1.12841856497075-1.46151065785802	chr12	3235541	3236148	+	0	NA	promoter-TSS (NR_015551)	promoter-TSS (NR_015551)	53	NR_015551	74173	Mm.309774	NM_028796	ENSMUSG00000079179	Rab10os	1700012B15Rik|1810036A22Rik	RAB10, member RAS oncogene family, opposite strand	ncRNA
common_peak2-23175-40-56--0.173914331413643-0.351783812734557	chr15	25984304	25985724	+	0	NA	Intergenic	RLTR47_MM|LTR|ERV1	70893	NM_144523	52521	Mm.29145	NM_144523	ENSMUSG00000052253	Zfp622	1110033B05Rik|D15Ertd806e|ZPR9|Znf622	zinc finger protein 622	protein-coding
common_peak1-10609-23-31--0.278232495490919-0.396392531282608	chr14	32084964	32085931	+	0	NA	intron (NM_001033668, intron 54 of 77)	intron (NM_001033668, intron 54 of 77)	20772	NM_027088	104416	Mm.3779	NM_027088	ENSMUSG00000021901	Bap1	2300006C11Rik|AA989761|AW553466|mKIAA0272|uch-x4	Brca1 associated protein 1	protein-coding
common_peak2-29734-33-19-1.00940946763817-1.9602491241746	chr6	85431683	85432574	+	0	NA	intron (NM_001001160, intron 3 of 13)	intron (NM_001001160, intron 3 of 13)	20860	NM_001001160	330369	Mm.38777	NM_001001160	ENSMUSG00000047013	Fbxo41	9630017H13|D6Ertd538e	F-box protein 41	protein-coding
common_peak1-8227-14-9-0.577288065470282-0.630231561310125	chr10	12693923	12694552	+	0	NA	Intergenic	Lx6|LINE|L1	-10172	NM_001163591	74732	Mm.248648	NM_029075	ENSMUSG00000039232	Stx11	5830405C08Rik	syntaxin 11	protein-coding
common_peak1-7537-29-21-0.652858461977813-1.06916698217164	chr1	34850918	34851670	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-7273	NM_183019	226970	Mm.41604	NM_183019	ENSMUSG00000037509	Arhgef4	9330140K16Rik|Asef|ENSMUSG00000070955	Rho guanine nucleotide exchange factor (GEF) 4	protein-coding
common_peak1-16639-55-34-1.07533685420774-3.59593437431231	chr6	71908340	71909422	+	0	NA	intron (NM_009088, intron 20 of 33)	IAPEz-int|LTR|ERVK	49834	NM_009088	20019	Mm.135581	NM_009088	ENSMUSG00000049553	Polr1a	194kDa|3010014K16Rik|RPA194|Rpo1-4|mRPA1	polymerase (RNA) I polypeptide A	protein-coding
common_peak1-18672-7-9--0.522837264589173-1.05908390183068	chr8	118393012	118393535	+	0	NA	Intergenic	Intergenic	-162479	NM_001025577	17132	Mm.275549	NM_001025577		Maf	2810401A20Rik|A230108G15Rik|AW047063|c-maf	avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog	protein-coding
unique_peak1-4888-8-5-0.420259917226415-1.10484139239135	chr4	43725946	43726317	+	0	NA	Intergenic	Intergenic	-6693	NM_019486	56015	Mm.377126	NM_019486	ENSMUSG00000046450	Olfr71	MOR262-4|mOR17	olfactory receptor 71	protein-coding
common_peak2-29153-149-151-0.681032983792488-5.1006621784034	chr5	129500473	129502233	+	0	NA	intron (NM_007941, intron 3 of 10)	intron (NM_007941, intron 3 of 10)	13094	NM_001286033	13852	Mm.260716	NM_007941	ENSMUSG00000029428	Stx2	AW538950|Epim|G1-536-1|Syn-2|repro34	syntaxin 2	protein-coding
common_peak2-21726-19-22--0.120874629395327-0.306080386793804	chr11	113292501	113293482	+	0	NA	intron (NM_027216, intron 5 of 9)	intron (NM_027216, intron 5 of 9)	134138	NM_001166503	69806	Mm.341021	NM_027216	ENSMUSG00000041654	Slc39a11	1810074D23Rik	solute carrier family 39 (metal ion transporter), member 11	protein-coding
common_peak2-21597-16-15-0.118263642268062-0.328191099940264	chr11	98941607	98942116	+	0	NA	intron (NM_172564, intron 2 of 12)	B1_Mus1|SINE|Alu	8759	NM_172564	217169	Mm.262067	NM_172564	ENSMUSG00000017607	Tns4	9930017A07Rik|AA589547|AU016405|Cten	tensin 4	protein-coding
common_peak2-30555-14-8-0.729291158915332-0.771068449301682	chr7	75585087	75585487	+	0	NA	Intergenic	B4|SINE|B4	22977	NR_046208	71244	Mm.410787	NR_046208		4933436H12Rik	-	RIKEN cDNA 4933436H12 gene	ncRNA
unique_peak1-961-13-11-0.193509529916613-0.379391706698377	chr11	60209579	60210269	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	20677	NM_145427	246782	Mm.41651	NM_145427	ENSMUSG00000042709	Atpaf2	ATP12|ATP12p	ATP synthase mitochondrial F1 complex assembly factor 2	protein-coding
common_peak2-31506-34-38-0.0966663081390173-0.344477557577616	chr8	107293499	107294550	+	0	NA	Intergenic	Lx6|LINE|L1	-25113	NM_001002775	442809	Mm.444779	NM_001002775		4932416K20Rik	-	RIKEN cDNA 4932416K20 gene	protein-coding
common_peak2-20118-62-67-0.323288617551746-0.764984435653934	chr1	162739737	162740612	+	0	NA	Intergenic	Intergenic	-17105	NM_013862	29809	Mm.25833	NM_013862	ENSMUSG00000026721	Rabgap1l	5830411O09Rik|8430421H08Rik|9630005B12Rik|AW049894|HHL|Hh1|mKIAA0471	RAB GTPase activating protein 1-like	protein-coding
common_peak1-14772-19-27--0.404667595395917-0.464317215211849	chr3	88553092	88553699	+	0	NA	intron (NM_018804, intron 2 of 3)	intron (NM_018804, intron 2 of 3)	23126	NM_018804	229521	Mm.379376	NM_018804	ENSMUSG00000068923	Syt11	1500004A13Rik|3632445O20Rik|5430404N14Rik|6530420C11Rik|AI851970	synaptotagmin XI	protein-coding
common_peak2-30031-14-6-1.09186123830004-1.16633110333236	chr6	125430321	125430735	+	0	NA	intron (NM_007657, intron 1 of 7)	intron (NM_007657, intron 1 of 7)	14245	NM_007657	12527	Mm.210676	NM_007657	ENSMUSG00000030342	Cd9	Tspan29	CD9 antigen	protein-coding
unique_peak1-1373-12-2-2.06381348436648-2.79529063155376	chr12	49392811	49393624	+	0	NA	Intergenic	Intergenic	-1090653	NM_001160112	15228	Mm.4704	NM_008241	ENSMUSG00000020950	Foxg1	2900064B05Rik|BF-1|Bf1|Hfh9|Hfhbf1	forkhead box G1	protein-coding
unique_peak1-4057-15-4-1.69023665566829-1.97518968347063	chr2	60870660	60871225	+	0	NA	Intergenic	Intergenic	-57734	NR_045335	100038493	Mm.388076	NR_045335	ENSMUSG00000075325	Gm13582	ENSMUSG00000075325|OTTMUSG00000012844	predicted gene 13582	ncRNA
common_peak2-30837-42-70--0.407417791637498-0.75058632931876	chr7	132852008	132852909	+	0	NA	intron (NM_001081022, intron 1 of 27)	intron (NM_001081022, intron 1 of 27)	1068	NM_001081022	233865	Mm.274389	NM_001081022	ENSMUSG00000032743	D430042O09Rik	Kiaa0556	RIKEN cDNA D430042O09 gene	protein-coding
common_peak2-29202-6-7--0.434601889619698-0.97990265578305	chr5	136632122	136632551	+	0	NA	intron (NM_178751, intron 2 of 2)	IAPEz-int|LTR|ERVK	14190	NM_178751	269717	Mm.308396	NM_178751	ENSMUSG00000039747	Orai2	A730041O15Rik|Tmem142b	ORAI calcium release-activated calcium modulator 2	protein-coding
unique_peak2-33057-3-10--1.87341470859657-1.75805390616669	chr10	76531572	76532082	+	0	NA	intron (NM_001109991, intron 24 of 40)	B2_Mm2|SINE|B2	35870	NM_031196	20509	Mm.265060	NM_031196	ENSMUSG00000001436	Slc19a1	AI323572|RFC|RFC-1|RFC1	solute carrier family 19 (folate transporter), member 1	protein-coding
common_peak1-18457-109-23-2.80119718116604-27.046935900834	chr8	84020530	84022658	+	0	NA	intron (NM_001297596, intron 2 of 24)	intron (NM_001297596, intron 2 of 24)	155133	NM_001297593	234515	Mm.324468	NM_001024617	ENSMUSG00000037940	Inpp4b	E130107I17Rik	inositol polyphosphate-4-phosphatase, type II	protein-coding
unique_peak1-4046-9-2-1.60465090568306-1.87199725847353	chr2	59644623	59645148	+	0	NA	intron (NM_001290659, intron 14 of 25)	B2_Mm2|SINE|B2	75778	NM_001159636	72137	Mm.288734	NM_028118	ENSMUSG00000026988	Wdsub1	1700048E19Rik|2610014F08Rik	WD repeat, SAM and U-box domain containing 1	protein-coding
common_peak1-11164-67-75-0.29648396933941-0.720618907161341	chr15	76117231	76119668	+	0	NA	intron (NM_028852, intron 4 of 4)	intron (NM_028852, intron 4 of 4)	-6415	NM_001195537	100503915	Mm.393455	NM_001195537	ENSMUSG00000071724	Smpd5	ENSMUSG00000071724|Gm10345|MA-nSMase	sphingomyelin phosphodiesterase 5	protein-coding
common_peak1-18679-16-14-0.211373046659543-0.364171515310935	chr8	119558082	119558941	+	0	NA	intron (NM_029686, intron 26 of 42)	ORR1A1|LTR|MaLR	-41162	NM_026572	68133	Mm.258462	NM_026572	ENSMUSG00000034424	Gcsh	1100001L02Rik|5730591C18Rik	glycine cleavage system protein H (aminomethyl carrier)	protein-coding
common_peak1-16376-14-15--0.100783839642355-0.301029995663982	chr5	122900409	122901018	+	0	NA	Intergenic	Intergenic	28260	NM_019805	56317	Mm.37341	NM_019805	ENSMUSG00000029466	Anapc7	APC7|AW545589	anaphase promoting complex subunit 7	protein-coding
unique_peak1-4912-13-5-1.19350952991661-1.95509489018123	chr4	49452892	49453519	+	0	NA	Intergenic	L1VL1|LINE|L1	10776	NM_001164565	230161	Mm.30101	NM_001164565		Acnat1	AI132189	acyl-coenzyme A amino acid N-acyltransferase 1	protein-coding
common_peak2-23918-10-16--0.73104749624157-0.604422558181019	chr16	8828946	8829705	+	0	NA	promoter-TSS (NM_001081400)	promoter-TSS (NM_001081400)	-868	NM_001081400	69053	Mm.390868	NM_001081400	ENSMUSG00000022507	1810013L24Rik	1110017P05Rik|3010002C02Rik|AA792997|AW124177|Gm19906|R74903	RIKEN cDNA 1810013L24 gene	protein-coding
unique_peak1-7083-11-7-0.508693584251613-1.21681515183528	chr9	22136893	22137533	+	0	NA	3' UTR (NM_028390, exon 24 of 24)	3' UTR (NM_028390, exon 24 of 24)	-2079	NR_033622	625603	Mm.37987	NR_033622		Gm6607	EG625603	40S ribosomal protein S20 pseudogene	pseudo
common_peak2-28918-40-52--0.0689447718121006-0.303138254425616	chr5	92746037	92746957	+	0	NA	Intergenic	Intergenic	-7447	NM_172713	231452	Mm.86564	NM_172713	ENSMUSG00000029415	Sdad1	4931421J16|AA591032|AW538460	SDA1 domain containing 1	protein-coding
common_peak1-10583-25-29--0.0450406902634128-0.301029995663982	chr14	26969691	26970554	+	0	NA	Intergenic	B2_Mm2|SINE|B2	28027	NM_001177539	100039293	Mm.429131	NM_001177539	ENSMUSG00000072672	Duxbl3	ENSMUSG00000072672|Gm10391	double homeobox B-like 3	protein-coding
common_peak2-21785-72-132--0.386698622628872-1.1385147859498	chr11	117821666	117824541	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	7577	NM_007707	12702	Mm.3468	NM_007707	ENSMUSG00000053113	Socs3	Cis3|Cish3|EF-10|Ef10|SSI-3|Ssi3	suppressor of cytokine signaling 3	protein-coding
common_peak2-21208-12-12--0.0516637330534535-0.309718203022949	chr11	61607770	61608558	+	0	NA	intron (NM_013881, intron 20 of 26)	intron (NM_013881, intron 20 of 26)	-32574	NM_001164243	212627	Mm.27703	NM_144806	ENSMUSG00000020528	Prpsap2	A230054F23Rik	phosphoribosyl pyrophosphate synthetase-associated protein 2	protein-coding
common_peak2-23357-4-7--1.02346051385325-1.09384600808989	chr15	44413366	44413581	+	0	NA	exon (NM_138674, exon 69 of 77)	exon (NM_138674, exon 69 of 77)	-37714	NM_019480	55960	Mm.287896	NM_019480	ENSMUSG00000022339	Ebag9	AI835379|Rcas1	estrogen receptor-binding fragment-associated gene 9	protein-coding
common_peak2-25544-22-20-0.254966682308644-0.421916810733237	chr19	6057836	6058825	+	0	NA	promoter-TSS (NM_026246)	promoter-TSS (NM_026246)	363	NM_001190436	14109	Mm.329631	NM_007990	ENSMUSG00000038274	Fau	MNSFbeta	Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)	protein-coding
common_peak2-24198-8-13--0.802132504110034-0.562038191119711	chr16	59471807	59472392	+	0	NA	intron (NM_025910, intron 1 of 9)	intron (NM_025910, intron 1 of 9)	498	NM_025910	67014	Mm.289150	NM_025910	ENSMUSG00000022724	Mina	1810047J07Rik|2410057H13Rik|3830408E23Rik|AI449204	myc induced nuclear antigen	protein-coding
unique_peak1-1300-11-1-2.50869358425161-2.83420869758413	chr11	120184629	120185166	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	23830	NR_105900	102465564		NR_105900		Mir6935	mmu-mir-6935	microRNA mir-6935	ncRNA
unique_peak1-4289-18-0-4.31291915122835-NA	chr2	143862448	143863159	+	0	NA	intron (NM_001044750, intron 1 of 2)	Lx8|LINE|L1	3965	NM_207275	403171	Mm.389362	NM_207275	ENSMUSG00000037307	Banf2	4930517K23Rik|Baf-L|Baf-like|Gm115	barrier to autointegration factor 2	protein-coding
common_peak1-12532-40-29-0.752085087142579-1.63185160949148	chr18	84049820	84051101	+	0	NA	Intergenic	(CTTG)n|Simple_repeat|Simple_repeat	205494	NM_001081300	110796	Mm.102136	NM_001081300	ENSMUSG00000046982	Tshz1	5730407I04Rik|D18Bwg1409e|Mtsh1|NY-CO-33|Sdccag33|Tsh1|mKIAA4206|teashirt1	teashirt zinc finger family member 1	protein-coding
common_peak2-24153-6-11--1.01956439034085-1.32595962126035	chr16	38562218	38562759	+	0	NA	promoter-TSS (NM_026407)	promoter-TSS (NM_026407)	-439	NM_001205287	67846	Mm.310476	NM_026407	ENSMUSG00000002845	Tmem39a	2610033C09Rik	transmembrane protein 39a	protein-coding
unique_peak1-6168-19-6-1.59533240460408-2.21753093801298	chr6	145120579	145121433	+	0	NA	intron (NM_001281980, intron 17 of 18)	PB1D7|SINE|Alu	38484	NM_177222	320662	Mm.207779	NM_177222	ENSMUSG00000043541	Casc1	A230084G12Rik|Las1	cancer susceptibility candidate 1	protein-coding
common_peak2-22541-68-111--0.237394142759308-0.57115485415796	chr13	56702707	56703752	+	0	NA	Intergenic	Intergenic	-7735	NM_009369	21810	Mm.14455	NM_009369	ENSMUSG00000035493	Tgfbi	68kDa|AI181842|AI747162|Beta-ig|big-h3	transforming growth factor, beta induced	protein-coding
unique_peak1-4558-11-2-1.92373108353046-2.32232533660526	chr3	50886807	50887476	+	0	NA	Intergenic	Intergenic	-141228	NM_009834	12457	Mm.86541	NM_009834	ENSMUSG00000023087	Ccrn4l	AU043840|Ccr4|nocturnin	CCR4 carbon catabolite repression 4-like (S. cerevisiae)	protein-coding
common_peak2-31039-34-35-0.212143525558954-0.439405572480892	chr8	13869489	13870266	+	0	NA	intron (NM_181854, intron 1 of 1)	CpG	236	NM_181854	101994	Mm.289346	NM_181854	ENSMUSG00000047710	Champ1	AA675043|AI116001|D8Ertd457e|D8Ertd569e|Zfp828|Znf828|mKIAA1802	chromosome alignment maintaining phosphoprotein 1	protein-coding
common_peak1-18044-20-18-0.240147271147608-0.388034239052786	chr7	144739339	144740300	+	0	NA	Intergenic	Lx6|LINE|L1	110462	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
common_peak2-23764-23-13-0.914412582451476-1.26025077975594	chr15	98176819	98177483	+	0	NA	Intergenic	Intergenic	-5781	NM_146281	258278	Mm.377409	NM_146281	ENSMUSG00000051793	Olfr284	MOR160-4	olfactory receptor 284	protein-coding
common_peak2-22989-8-11--0.579740082773585-1.14218153353838	chr14	57423738	57424039	+	0	NA	intron (NM_144842, intron 2 of 7)	intron (NM_144842, intron 2 of 7)	6413	NM_001253753	219105	Mm.473172	NM_144842	ENSMUSG00000040123	Zmym5	9830124H08Rik	zinc finger, MYM-type 5	protein-coding
unique_peak1-2480-7-5-0.214128329577033-1.01466476204226	chr16	4601978	4602504	+	0	NA	intron (NM_031184, intron 1 of 6)	intron (NM_031184, intron 1 of 6)	7528	NM_031184	83396	Mm.134072	NM_031184	ENSMUSG00000014303	Glis2	Gli5|Klf16|Nkl	GLIS family zinc finger 2	protein-coding
common_peak2-22676-7-8--0.370834171144123-1.00793137938329	chr13	98002097	98002539	+	0	NA	Intergenic	Intergenic	-8742	NM_007930	13803	Mm.241073	NM_007930	ENSMUSG00000041773	Enc1	Nrpb|PIG10	ectodermal-neural cortex 1	protein-coding
unique_peak2-36498-6-8--0.60452689106201-1.03789460276074	chr2	155827045	155827459	+	0	NA	3' UTR (NM_001145352, exon 5 of 5)	3' UTR (NM_001145352, exon 5 of 5)	2911	NM_001145351	320095	Mm.442175	NM_001145351	ENSMUSG00000074646	6430550D23Rik	-	RIKEN cDNA 6430550D23 gene	protein-coding
common_peak2-29861-16-23--0.466698858453094-0.497202060940027	chr6	100670496	100671348	+	0	NA	intron (NM_198612, intron 1 of 6)	intron (NM_198612, intron 1 of 6)	16194	NM_198612	232313	Mm.272037	NM_198612	ENSMUSG00000030074	Gxylt2	Glt8d4|Gm152	glucoside xylosyltransferase 2	protein-coding
common_peak1-18406-11-7-0.508693584251613-1.21681515183528	chr8	72192237	72192732	+	0	NA	Intergenic	Intergenic	14029	NM_001177527	636741	Mm.480188	NM_001177527	ENSMUSG00000091764	Zfp964	4732490P12|EG636741|Gm7187	zinc finger protein 964	protein-coding
unique_peak2-33150-5-13--1.51173525806346-1.78669045979184	chr10	86705094	86705512	+	0	NA	Intergenic	B3|SINE|B2	184512	NM_029685	76640	Mm.78423	NM_029685	ENSMUSG00000047129	1700113H08Rik	-	RIKEN cDNA 1700113H08 gene	protein-coding
common_peak2-22964-16-15-0.118263642268062-0.328191099940264	chr14	54221831	54222466	+	0	NA	Intergenic	Intergenic	-63467	NM_001205242	100568452	Mm.213248	NM_001205242		A430107P09Rik	Va10	RIKEN cDNA A430107P09 gene	protein-coding
common_peak2-24989-8-7-0.00522241794757061-1.00793137938329	chr18	10182360	10182764	+	0	NA	promoter-TSS (NM_009071)	promoter-TSS (NM_009071)	-772	NM_009071	19877	Mm.6710	NM_009071	ENSMUSG00000024290	Rock1	1110055K06Rik|Rock-I	Rho-associated coiled-coil containing protein kinase 1	protein-coding
unique_peak2-33942-4-5--0.608423014574403-0.909929411522249	chr12	75659551	75659843	+	0	NA	Intergenic	Intergenic	261236	NM_198866	386753	Mm.341686	NM_198866	ENSMUSG00000029878	Dbpht2	Spot2	DNA binding protein with his-thr domain	protein-coding
common_peak1-11968-8-7-0.00522241794757061-1.00793137938329	chr17	6811817	6812341	+	0	NA	intron (NM_001166627, intron 4 of 4).3	intron (NM_001166627, intron 4 of 4).3	5583	NM_001166630	100040563	Mm.457381	NM_001166630		Dynlt1c	100040603|Dynlt1d	dynein light chain Tctex-type 1C	protein-coding
common_peak1-13913-42-46-0.187740476189546-0.440152849854807	chr2	83644345	83645246	+	0	NA	3' UTR (NM_008402, exon 30 of 30)	3' UTR (NM_008402, exon 30 of 30)	-8090	NM_175514	241520	Mm.330351	NM_175514	ENSMUSG00000048388	Fam171b	D430039N05Rik	family with sequence similarity 171, member B	protein-coding
common_peak2-30859-23-18-0.473839991065495-0.618644178587689	chr7	139252869	139253879	+	0	NA	intron (NM_018867, intron 8 of 13)	intron (NM_018867, intron 8 of 13)	93050	NM_018867	55987	Mm.471654	NM_018867	ENSMUSG00000030862	Cpxm2	4632435C11Rik|CPX-2|Cpx2	carboxypeptidase X 2 (M14 family)	protein-coding
common_peak2-28797-8-8--0.164702583494742-1.00793137938329	chr5	64751544	64751934	+	0	NA	Intergenic	Intergenic	107442	NR_040681	69999	Mm.261413	NR_040681		1700027F09Rik	-	RIKEN cDNA 1700027F09 gene	ncRNA
common_peak2-32166-62-89--0.0811016375275901-0.320999317136426	chr9	110531840	110533446	+	0	NA	intron (NM_183276, intron 36 of 53)	CpG	-5746	NM_026012	67169	Mm.46680	NM_026012	ENSMUSG00000032491	Nradd	2610311B09Rik|BB104149|NRDD|NRH2|PLAIDD	neurotrophin receptor associated death domain	protein-coding
common_peak2-31736-16-16-0.0308008010177225-0.307611222530525	chr9	14500624	14501234	+	0	NA	Intergenic	B3|SINE|B2	44248	NM_177905	330890	Mm.334969	NM_177905	ENSMUSG00000036912	Piwil4	9230101H05Rik|Miwi2	piwi-like RNA-mediated gene silencing 4	protein-coding
common_peak1-12725-21-42--0.856775489435862-1.3806499615138	chr18	53416988	53417810	+	0	NA	intron (NM_029394, intron 1 of 6)	intron (NM_029394, intron 1 of 6)	12083	NM_029394	69226	Mm.32414	NM_029394	ENSMUSG00000024535	Snx24	2810011K15Rik|5730433I16Rik|AI451341	sorting nexing 24	protein-coding
unique_peak2-38981-3-5--0.998945590680433-0.96108193396963	chr8	40926169	40926555	+	0	NA	Intergenic	B3A|SINE|B2	-198330	NM_001113326	20288	Mm.239291	NM_031195	ENSMUSG00000025044	Msr1	MRS-A|MSR|MSR-A|SR-AI|SR-AII|Scara1|Scvr	macrophage scavenger receptor 1	protein-coding
common_peak1-11358-33-60--0.599399775037358-1.1755042381992	chr15	89355166	89356377	+	0	NA	intron (NM_021423, intron 12 of 21)	intron (NM_021423, intron 12 of 21)	25483	NM_021423	58234	Mm.146855	NM_021423	ENSMUSG00000022623	Shank3	AI841104|SHANK3c-3|SHANK3c-4|Shank3b	SH3/ankyrin domain gene 3	protein-coding
unique_peak2-36782-3-7--1.41398308995928-1.23214870625617	chr3	79192596	79193038	+	0	NA	intron (NM_001142953, intron 1 of 4)	intron (NM_001142953, intron 1 of 4)	43519	NM_001142953	100233207	Mm.373801	NM_001142953	ENSMUSG00000091685	Gm17359	-	predicted gene, 17359	protein-coding
unique_peak1-7204-8-2-1.42025991722641-1.65811743852845	chr9	66718125	66718638	+	0	NA	intron (NM_173413, intron 1 of 7)	intron (NM_173413, intron 1 of 7)	-35868	NM_026674	68318	Mm.284229	NM_026674	ENSMUSG00000053040	Aph1c	0610008A10Rik|APH-1b|Aph1b	anterior pharynx defective 1c homolog (C. elegans)	protein-coding
common_peak1-8346-22-48--0.967425739027804-1.90173050117047	chr10	52417461	52418518	+	0	NA	intron (NM_178675, intron 1 of 7)	ORR1B1|LTR|MaLR	7682	NM_178675	215085	Mm.338690	NM_178675	ENSMUSG00000038602	Slc35f1	Duf6|E130016L02	solute carrier family 35, member F1	protein-coding
unique_peak2-33755-8-7-0.00522241794757061-1.00793137938329	chr11	117483342	117483739	+	0	NA	Intergenic	PB1D10|SINE|Alu	10979	NR_015489	78403	Mm.212543	NR_015489		2900041M22Rik	-	RIKEN cDNA 2900041M22 gene	ncRNA
common_peak1-10961-22-29--0.259606490521114-0.36542888694933	chr15	27466577	27467564	+	0	NA	intron (NM_020332, intron 1 of 11)	intron (NM_020332, intron 1 of 11)	-34179	NR_106065	102466808		NR_106065		Mir7117	mmu-mir-7117	microRNA mir-7117	ncRNA
unique_peak1-3024-9-3-1.18961340640422-1.57096726280955	chr18	11058829	11059276	+	0	NA	exon (NM_010258, exon 3 of 7)	exon (NM_010258, exon 3 of 7)	-6487	NR_105023	68434	Mm.57626	NR_105022	ENSMUSG00000097222	1010001N08Rik	-	RIKEN cDNA 1010001N08 gene	ncRNA
unique_peak1-5163-12-6-0.841421063030034-1.58711810488664	chr5	25536806	25537394	+	0	NA	Intergenic	Intergenic	271256	NM_001004365	242894	Mm.150319	NM_001004365	ENSMUSG00000056367	Actr3b	9630005C02|ARP11|AW047569|Arp3b|Arp3beta	ARP3 actin-related protein 3B	protein-coding
common_peak1-12881-47-21-1.47540980612925-4.72447886971477	chr18	78072433	78073569	+	0	NA	intron (NM_013831, intron 1 of 14)	Lx3C|LINE|L1	39712	NM_013831	19201	Mm.57174	NM_013831		Pstpip2	MAYP|cmo	proline-serine-threonine phosphatase-interacting protein 2	protein-coding
common_peak2-19705-17-18--0.0296311752385474-0.306899554715732	chr1	64225472	64226258	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-57902	NM_033563	93691	Mm.29466	NM_033563	ENSMUSG00000025959	Klf7	9830124P08Rik	Kruppel-like factor 7 (ubiquitous)	protein-coding
common_peak1-13739-17-10-0.75886471956774-0.917676348953458	chr2	32503020	32503740	+	0	NA	intron (NM_001146348, intron 1 of 14)	intron (NM_001146348, intron 1 of 14)	1265	NM_001146348	13805	Mm.225297	NM_007932	ENSMUSG00000026814	Eng	AI528660|AI662476|CD105|Endo|S-endoglin	endoglin	protein-coding
common_peak1-7684-7-11--0.785871670422967-1.21681515183528	chr1	79776007	79776383	+	0	NA	exon (NM_001081210, exon 3 of 4)	exon (NM_001081210, exon 3 of 4)	3602	NM_001081210	69163	Mm.238455	NM_001081210	ENSMUSG00000026248	Mrpl44	1810030E18Rik|5730593H20Rik|AI463302	mitochondrial ribosomal protein L44	protein-coding
common_peak1-13308-60-65-0.309897742262078-0.728895227537735	chr19	41482152	41483920	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-23476	NM_031376	83490	Mm.222266	NM_031376	ENSMUSG00000025017	Pik3ap1	1810044J04Rik|BCAP	phosphoinositide-3-kinase adaptor protein 1	protein-coding
common_peak2-25251-14-12-0.198776442216552-0.373562084705529	chr18	65430929	65431563	+	0	NA	intron (NM_001037294, intron 12 of 12)	intron (NM_001037294, intron 12 of 12)	22731	NR_029600	387231		NR_029600	miRBase:MI0000256	Mir122a	Mirn122a|mmu-mir-122	microRNA 122a	ncRNA
common_peak1-13725-17-22--0.305265617851975-0.348739088570342	chr2	31245740	31246542	+	0	NA	Intergenic	(TGGA)n|Simple_repeat|Simple_repeat	-79649	NM_007494	11898	Mm.3217	NM_007494	ENSMUSG00000076441	Ass1	AA408052|ASS|Ass-1|fold	argininosuccinate synthetase 1	protein-coding
common_peak1-13548-30-30-0.215479099104998-0.419637632935632	chr2	4400787	4401744	+	0	NA	intron (NM_172475, intron 3 of 22)	RMER1B|Other|Other	79243	NM_001177843	209630	Mm.37932	NM_172475	ENSMUSG00000026657	Frmd4a	2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|OTTMUSG00000010806|mKIAA1294	FERM domain containing 4A	protein-coding
unique_peak2-37454-1-7--2.62705701021674-1.80617997398389	chr5	123076435	123076731	+	0	NA	Intergenic	B3A|SINE|B2	-12056	NM_009879	12589	Mm.10125	NM_009879	ENSMUSG00000029469	Ift81	AW060663|Cdv-1|Cdv-1r|Cdv1	intraflagellar transport 81	protein-coding
unique_peak1-4550-8-1-2.00522241794757-2.05605744720049	chr3	38473443	38473880	+	0	NA	Intergenic	L1M5|LINE|L1	-89923	NM_001167883	99696	Mm.290937	NM_001033198	ENSMUSG00000044864	Ankrd50	AI662170|E430012K20Rik|mKIAA1223|mKIAA3019	ankyrin repeat domain 50	protein-coding
common_peak2-23185-16-13-0.310908720210457-0.417187467413082	chr15	75857215	75857981	+	0	NA	Intergenic	MT2B|LTR|ERVL	-12832	NM_134087	105732	Mm.267178	NM_134087	ENSMUSG00000046761	Fam83h	AA409316	family with sequence similarity 83, member H	protein-coding
unique_peak1-1110-9-0-3.18961340640422-3.01029995663981	chr11	94037311	94037617	+	0	NA	Intergenic	Intergenic	-35304	NM_009427	22057	Mm.259673	NM_009427	ENSMUSG00000037573	Tob1	Tob|Trob	transducer of ErbB-2.1	protein-coding
common_peak1-10435-12-6-0.841421063030034-1.58711810488664	chr13	102896076	102896627	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-358179	NM_001077495	18708	Mm.259333	NM_001024955	ENSMUSG00000041417	Pik3r1	PI3K|p50alpha|p55alpha|p85alpha	phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)	protein-coding
unique_peak2-32567-3-6--1.22133801201688-1.08602067057793	chr1	82200709	82201057	+	0	NA	Intergenic	Intergenic	72392	NR_105762	102466629		NR_105762	miRBase:MI0021872	Mir6344	mmu-mir-6344	microRNA mir-6344	ncRNA
common_peak2-28703-34-59--0.524822068607253-0.925339689277516	chr5	34369479	34370774	+	0	NA	intron (NM_181857, intron 19 of 24)	MTE-int|LTR|MaLR	31493	NM_001001985	269642	Mm.274610	NM_001001985	ENSMUSG00000048142	Nat8l	1110038O08Rik|Shati	N-acetyltransferase 8-like	protein-coding
common_peak2-30350-36-82--0.89571834517917-2.67606589893834	chr7	27486847	27488277	+	0	NA	Intergenic	L1_Mm|LINE|L1	-16113	NM_001081148	243881	Mm.294678	NM_001081148	ENSMUSG00000040650	Cyp2b23	EG243881	cytochrome P450, family 2, subfamily b, polypeptide 23	protein-coding
common_peak1-7785-50-65--0.00345380287950103-0.302687624289356	chr1	97660656	97662252	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-48359	NR_040479	75381	Mm.417807	NR_040479		4930598F16Rik	-	RIKEN cDNA 4930598F16 gene	ncRNA
common_peak2-30071-32-20-0.886774596440899-1.65365064026544	chr6	130064033	130064680	+	0	NA	TTS (NM_001101620)	TTS (NM_001101620)	15497	NM_010650	16639	Mm.439698	NM_010650	ENSMUSG00000089727	Klra8	Cmv-1|Cmv1|Ly49h|Ly49u<129>	killer cell lectin-like receptor, subfamily A, member 8	protein-coding
common_peak1-11604-9-22--1.33394854965279-1.52222891542741	chr16	17759775	17760212	+	0	NA	intron (NM_145479, intron 1 of 6)	CpG	279	NM_145479	224023	Mm.282807	NM_145479	ENSMUSG00000022750	Klhl22	2610318I18Rik|Kelchl	kelch-like 22	protein-coding
unique_peak1-4765-9-7-0.18961340640422-1.05908390183068	chr3	122317167	122317693	+	0	NA	intron (NM_001114665, intron 1 of 15)	B3|SINE|B2	5202	NM_001114665	214459	Mm.209491	NM_153118	ENSMUSG00000039735	Fnbp1l	2610318I01Rik|AW548221|TOCA1|toca-1	formin binding protein 1-like	protein-coding
unique_peak1-3216-13-1-2.77847203063777-3.64038867156802	chr18	57838430	57839025	+	0	NA	intron (NM_029290, intron 6 of 6)	intron (NM_029290, intron 6 of 6)	-40488	NR_045360	70157	Mm.490532	NR_045360		2210409D07Rik	-	RIKEN cDNA 2210409D07 gene	ncRNA
unique_peak1-5322-14-1-2.89921616035764-3.91338994363176	chr5	77398566	77399166	+	0	NA	Intergenic	Intergenic	-4860	NM_025691	66661	Mm.296976	NM_025691	ENSMUSG00000036323	Srp72	5730576P14Rik|72kDa|AI132477|BC019196|C77589	signal recognition particle 72	protein-coding
common_peak1-15069-11-7-0.508693584251613-1.21681515183528	chr3	126595558	126596194	+	0	NA	Intergenic	L1_Rod|LINE|L1	50428	NM_001034168	109676	Mm.220242	NM_178655	ENSMUSG00000032826	Ank2	AI835472|AW491075|Ank-2	ankyrin 2, brain	protein-coding
common_peak1-15686-13-6-0.971117108580164-1.01572999746118	chr4	138454696	138455264	+	0	NA	intron (NM_028453, intron 4 of 7)	intron (NM_028453, intron 4 of 7)	14882	NM_028453	73162	Mm.238081	NM_028453	ENSMUSG00000041161	Otud3	3110030K17Rik	OTU domain containing 3	protein-coding
unique_peak1-3233-19-9-1.08075923177432-1.37307999835977	chr18	61556197	61557288	+	0	NA	intron (NM_133249, intron 1 of 11)	intron (NM_133249, intron 1 of 11)	3343	NM_133249	170826	Mm.415302	NM_133249	ENSMUSG00000033871	Ppargc1b	4631412G21Rik|Perc	peroxisome proliferative activated receptor, gamma, coactivator 1 beta	protein-coding
common_peak2-28838-32-29-0.372201423611141-0.621525249893804	chr5	67260592	67261541	+	0	NA	intron (NM_001001980, intron 2 of 25)	intron (NM_001001980, intron 2 of 25)	-98589	NM_001256122	77569	Mm.374778	NM_001001980	ENSMUSG00000037736	Limch1	3732412D22Rik|mKIAA1102	LIM and calponin homology domains 1	protein-coding
common_peak2-21501-18-25--0.38752056691274-0.421916810733234	chr11	90637928	90638744	+	0	NA	Intergenic	Intergenic	-27669	NR_045956	73922	Mm.233289	NR_045956	ENSMUSG00000085940	4930405D11Rik	-	RIKEN cDNA 4930405D11 gene	ncRNA
common_peak2-28110-39-49--0.0280949428555708-0.301029995663988	chr4	88954932	88956851	+	0	NA	intron (NM_007670, intron 1 of 1)	intron (NM_007670, intron 1 of 1)	1050	NM_007670	12579	Mm.423094	NM_007670	ENSMUSG00000073802	Cdkn2b	AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b	cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)	protein-coding
common_peak2-26420-15-10-0.552733131918359-0.604422558181019	chr2	60693501	60694163	+	0	NA	intron (NM_020296, intron 1 of 13)	intron (NM_020296, intron 1 of 13)	25663	NM_001141932	56878	Mm.259667	NM_020296	ENSMUSG00000026970	Rbms1	2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1	RNA binding motif, single stranded interacting protein 1	protein-coding
common_peak1-10262-13-13--0.0288828914198356-0.309074325783021	chr13	55512714	55513234	+	0	NA	intron (NM_011392, intron 10 of 12)	intron (NM_011392, intron 10 of 12)	3619	NM_029303	75477	Mm.432537	NM_029303		Pfn3	1700012P12Rik	profilin 3	protein-coding
common_peak1-9462-91-98-0.444075325522729-1.58230355099959	chr11	103697027	103698485	+	0	NA	intron (NM_008740, intron 17 of 20)	intron (NM_008740, intron 17 of 20)	62267	NM_009521	22415	Mm.159091	NM_009521	ENSMUSG00000000125	Wnt3	Int-4|Wnt-3	wingless-type MMTV integration site family, member 3	protein-coding
common_peak2-22706-11-21--0.950738034385684-0.991115276827166	chr13	101428062	101428848	+	0	NA	intron (NM_027592, intron 2 of 4)	intron (NM_027592, intron 2 of 4)	6893	NM_001015889	108143	Mm.301148	NM_027139	ENSMUSG00000052293	Taf9	2310012M09Rik|AA673500|AU045423|TAFII31|TAFII32|Taf2g	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor	protein-coding
common_peak2-22941-20-11-0.903112283870037-1.11267835143409	chr14	47567848	47568416	+	0	NA	intron (NM_028966, intron 2 of 11)	MIR|SINE|MIR	-52883	NM_001163433	74480	Mm.214454	NM_028966	ENSMUSG00000021838	Samd4	1700024G08Rik|1700111L17Rik|4933436G17Rik|Samd4a|Smaug|Smaug1	sterile alpha motif domain containing 4	protein-coding
unique_peak2-38598-2-5--1.50241675698448-1.08602067057793	chr7	79272207	79272513	+	0	NA	intron (NM_001024703, intron 17 of 22)	Lx8|LINE|L1	179121	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding
common_peak1-8203-10-8-0.186490343566457-1.078512453669	chr10	4612261	4612772	+	0	NA	Intergenic	Intergenic	71440	NM_025995	67141	Mm.197520	NM_025995	ENSMUSG00000019773	Fbxo5	2510044I10Rik|C85305|Emi1|Fbxo31	F-box protein 5	protein-coding
common_peak2-26125-10-6-0.549060422951165-1.21398586181642	chr2	6350131	6350554	+	0	NA	intron (NM_181399, intron 12 of 13)	L1MA7|LINE|L1	76560	NM_181399	98910	Mm.40673	NM_181399	ENSMUSG00000039046	Usp6nl	AI316785|RNTRE|TRE2NL|mKIAA0019	USP6 N-terminal like	protein-coding
common_peak1-9598-12-12--0.0516637330534535-0.309718203022949	chr11	120039676	120040237	+	0	NA	Intergenic	Intergenic	11214	NR_030682	100042332	Mm.269766	NR_030682		2810410L24Rik	-	RIKEN cDNA 2810410L24 gene	ncRNA
common_peak1-12806-33-29-0.42444696691701-0.683454027796267	chr18	66001976	66002767	+	0	NA	Intergenic	Intergenic	-30762	NM_175012	225642	Mm.20298	NM_175012	ENSMUSG00000024517	Grp	BLP	gastrin releasing peptide	protein-coding
common_peak1-17267-18-14-0.406028555619833-0.532159081577619	chr6	134916162	134917055	+	0	NA	Intergenic	L1MD|LINE|L1	-15411	NM_001109914	381823	Mm.296104	NM_001109914	ENSMUSG00000090698	Apold1	Gm1075	apolipoprotein L domain containing 1	protein-coding
common_peak2-22502-10-10--0.103016273628528-0.301029995663987	chr13	51964140	51964536	+	0	NA	Intergenic	Intergenic	22294	NM_011817	23882	Mm.281298	NM_011817	ENSMUSG00000021453	Gadd45g	AI327420|C86281|CR6|DDIT2|OIG37	growth arrest and DNA-damage-inducible 45 gamma	protein-coding
common_peak1-14393-29-25-0.411850362474019-0.664636481544818	chr2	172370641	172371629	+	0	NA	Intergenic	Intergenic	-3958	NM_009335	21420	Mm.3629	NM_009335	ENSMUSG00000028640	Tfap2c	AA409384|AP2gamma|Ap-2.2|Stra2|Tcfap2c	transcription factor AP-2, gamma	protein-coding
common_peak2-23428-11-10-0.0492619656143161-0.31137425193576	chr15	61717110	61717741	+	0	NA	Intergenic	ORR1E|LTR|MaLR	-99471	NM_001177354	17869	Mm.2444	NM_010849	ENSMUSG00000022346	Myc	AU016757|Myc2|Niard|Nird|bHLHe39	myelocytomatosis oncogene	protein-coding
unique_peak2-37602-5-9--1.02630843089322-1.21398586181642	chr5	53997789	53998358	+	0	NA	intron (NM_001277116, intron 3 of 12)	B2_Mm2|SINE|B2	16348	NM_001080927	19664	Mm.209292	NM_009035	ENSMUSG00000039191	Rbpj	AI843960|CBF1|Igkjrb|Igkrsbp|RBP-J|RBP-J kappa|RBPjk|Rbpsuh	recombination signal binding protein for immunoglobulin kappa J region	protein-coding
unique_peak2-32810-7-5-0.214128329577033-1.01466476204226	chr1	184061711	184062146	+	0	NA	3' UTR (NM_012058, exon 3 of 3)	3' UTR (NM_012058, exon 3 of 3)	7060	NM_012058	27058	Mm.303071	NM_012058	ENSMUSG00000026511	Srp9	9kDa	signal recognition particle 9	protein-coding
common_peak2-29809-72-95-0.0836213121511618-0.355052609790503	chr6	91201177	91203418	+	0	NA	intron (NM_001081437, intron 3 of 16)	intron (NM_001081437, intron 3 of 16)	39539	NM_007992	14115	Mm.249146	NM_007992	ENSMUSG00000064080	Fbln2	5730577E14Rik|FIBL-2	fibulin 2	protein-coding
common_peak1-16009-23-18-0.473839991065495-0.618644178587689	chr5	34549254	34550097	+	0	NA	intron (NM_001015039, intron 8 of 12)	intron (NM_001015039, intron 8 of 12)	-19316	NM_010753	17122	Mm.259260	NM_010753	ENSMUSG00000037235	Mxd4	2810410A03Rik|Mad4|bHLHc12	Max dimerization protein 4	protein-coding
unique_peak1-2133-21-5-1.98452676454508-3.24127775360835	chr15	55132839	55133831	+	0	NA	Intergenic	Intergenic	-5970	NM_181277	12818	Mm.297859	NM_181277	ENSMUSG00000022371	Col14a1	5730412L22Rik|AW108078	collagen, type XIV, alpha 1	protein-coding
unique_peak1-6337-8-2-1.42025991722641-1.65811743852845	chr7	49162086	49162614	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-34310	NM_001105055	628422	Mm.469902	NM_001105055	ENSMUSG00000090383	Vmn2r58	EG628422	vomeronasal 2, receptor 58	protein-coding
common_peak2-28324-57-83--0.126284382699832-0.34989958244832	chr4	133813269	133815329	+	0	NA	Intergenic	Intergenic	-4278	NM_001099296	72690	Mm.100168	NM_001099296	ENSMUSG00000050105	Grrp1	2810043G13Rik|Fam110d	glycine/arginine rich protein 1	protein-coding
common_peak2-23656-12-9-0.326847890200276-0.459837087125828	chr15	85013385	85013873	+	0	NA	Intergenic	Intergenic	-22809	NM_010180	14114	Mm.297992	NM_010180	ENSMUSG00000006369	Fbln1	-	fibulin 1	protein-coding
common_peak1-16208-9-7-0.18961340640422-1.05908390183068	chr5	93296442	93296957	+	0	NA	intron (NM_001077595, intron 1 of 9)	intron (NM_001077595, intron 1 of 9)	-30320	NM_001077596	27428	Mm.46014	NM_015756	ENSMUSG00000029381	Shroom3	AL022960|D5Ertd287e|Shrm|Shrm3	shroom family member 3	protein-coding
common_peak2-19598-62-88--0.064981972164313-0.312327239180829	chr1	24678387	24679459	+	0	NA	Intergenic	Lx3_Mus|LINE|L1	-6460	NM_026719	68421	Mm.336563	NM_026719	ENSMUSG00000073725	Lmbrd1	0910001K20Rik|AV347960	LMBR1 domain containing 1	protein-coding
common_peak2-26027-41-67--0.386314136401679-0.712696723931505	chr19	60580130	60581074	+	0	NA	Intergenic	Intergenic	-36395	NM_201615	226278	Mm.377241	NM_201615	ENSMUSG00000045052	Prlhr	Gm339|Gpr10|Gr3|Prrpr	prolactin releasing hormone receptor	protein-coding
unique_peak2-32601-4-12--1.72390023199434-1.85743853830261	chr1	91458838	91459322	+	0	NA	intron (NM_001037136, intron 1 of 16)	intron (NM_001037136, intron 1 of 16)	107694	NM_001037136	347722	Mm.291135	NM_178119	ENSMUSG00000055013	Agap1	Centg2|Ggap1|R75364|mKIAA1099	ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	protein-coding
unique_peak2-38700-3-12--2.11442280810037-2.15846853396659	chr7	105622239	105622826	+	0	NA	intron (NM_001130693, intron 17 of 18)	intron (NM_001130693, intron 17 of 18)	-20200	NM_001113379	434215	Mm.323057	NM_001113379	ENSMUSG00000090958	Lrrc32	AI426318|D11S833Eh|D7H11S833E|EG434215|Garp	leucine rich repeat containing 32	protein-coding
common_peak2-20689-44-61--0.13230347581834-0.330479330879757	chr10	91123218	91124030	+	0	NA	Intergenic	Intergenic	411306	NR_029812	723955		NR_029812	miRBase:MI0000715	Mir135a-2	Mirn135a-2	microRNA 135a-2	ncRNA
common_peak2-28906-19-25--0.297752391479405-0.376654945067947	chr5	92082950	92083689	+	0	NA	Intergenic	RSINE1|SINE|B4	113007	NR_045383	73452	Mm.396233	NR_045383		1700063O14Rik	-	RIKEN cDNA 1700063O14 gene	ncRNA
unique_peak2-35839-9-20--1.20270401637454-1.23014042908325	chr18	69347694	69348735	+	0	NA	Intergenic	ORR1A3|LTR|MaLR	-155932	NM_013685	21413	Mm.4269	NM_013685	ENSMUSG00000053477	Tcf4	5730422P05Rik|ASP-I2|E2-2|E2.2|ITF-2|ITF-2b|ITF2|ME2|MITF-2A|MITF-2B|SEF-2|SEF2|SEF2-1|TFE|Tcf-4|bHLHb19	transcription factor 4	protein-coding
common_peak1-7755-10-4-1.03448725012141-1.5150158574804	chr1	91069266	91069745	+	0	NA	Intergenic	L1Md_F3|LINE|L1	20622	NR_106129	102465771		NR_106129		Mir7669	mmu-mir-7669	microRNA mir-7669	ncRNA
common_peak2-23312-21-25--0.130950452874856-0.305461879681376	chr15	36810512	36811361	+	0	NA	Intergenic	Intergenic	-84252	NM_001253806	22631	Mm.3360	NM_011740	ENSMUSG00000022285	Ywhaz	1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	protein-coding
unique_peak1-3770-40-12-1.95853596461001-5.94371904048539	chr19	55267986	55269691	+	0	NA	intron (NM_009348, intron 9 of 9)	intron (NM_009348, intron 9 of 9)	1670	NR_106146	102465990		NR_106146		Mir6715	mmu-mir-6715	microRNA mir-6715	ncRNA
unique_peak1-4440-13-5-1.19350952991661-1.95509489018123	chr2	170148401	170149159	+	0	NA	Intergenic	MLT1J|LTR|MaLR	-33081	NR_040610	73303	Mm.443297	NR_040610	ENSMUSG00000086999	Bcas1os2	1700040N02Rik	breast carcinoma amplified sequence 1, opposite strand 2	ncRNA
common_peak2-29899-4-7--1.02346051385325-1.09384600808989	chr6	113604365	113604655	+	0	NA	intron (NM_001113553, intron 2 of 11)	intron (NM_001113553, intron 2 of 11)	16049	NM_001113553	108960	Mm.152142	NM_172161	ENSMUSG00000060477	Irak2	6330415L08Rik|AI649099|IRAK-2	interleukin-1 receptor-associated kinase 2	protein-coding
unique_peak2-34919-10-11--0.228547155712387-0.31137425193576	chr15	84681070	84681585	+	0	NA	intron (NM_001081166, intron 2 of 12)	intron (NM_001081166, intron 2 of 12)	5232	NM_001081166	271305	Mm.101022	NM_001081166	ENSMUSG00000016624	Phf21b	A730032D07Rik	PHD finger protein 21B	protein-coding
common_peak2-26829-104-95-0.719782700491002-3.74368928240858	chr2	152736284	152738746	+	0	NA	intron (NM_001081044, intron 1 of 11)	intron (NM_001081044, intron 1 of 11)	427	NM_001081044	228785	Mm.250604	NM_001081044	ENSMUSG00000027470	Mylk2	9830004H17Rik|BB138278	myosin, light polypeptide kinase 2, skeletal muscle	protein-coding
common_peak2-24899-12-14--0.25811461052088-0.309074325783021	chr17	84106103	84106689	+	0	NA	intron (NM_001171053, intron 1 of 13)	intron (NM_001171053, intron 1 of 13)	893	NM_001171052	116871	Mm.277668	NM_054082	ENSMUSG00000055817	Mta3	1110002J22Rik|mKIAA1266	metastasis associated 3	protein-coding
common_peak1-9720-30-28-0.311694414364301-0.518746288394487	chr12	31654324	31655399	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	58327	NM_013709	24057	Mm.218624	NM_013709	ENSMUSG00000020669	Sh3yl1	AI314953|Ray|YSC84	Sh3 domain YSC-like 1	protein-coding
common_peak1-13146-9-5-0.604650905683064-1.21398586181642	chr19	10274159	10274759	+	0	NA	exon (NM_001271615, exon 2 of 2)	exon (NM_001271615, exon 2 of 2)	3974	NM_007999	14156	Mm.2952	NM_007999	ENSMUSG00000024742	Fen1	AW538437|FEN-1	flap structure specific endonuclease 1	protein-coding
common_peak2-22665-8-6-0.197867495889966-1.03789460276074	chr13	96680591	96680989	+	0	NA	Intergenic	Intergenic	-18913	NM_027711	544963	Mm.38878	NM_027711	ENSMUSG00000021676	Iqgap2	4933417J23Rik|A630053O10|AI788777	IQ motif containing GTPase activating protein 2	protein-coding
common_peak2-25856-12-11-0.0638134843664826-0.337263207250336	chr19	42613267	42613834	+	0	NA	intron (NM_177464, intron 1 of 6)	intron (NM_177464, intron 1 of 6)	20255	NM_177464	52013	Mm.254169	NM_177464	ENSMUSG00000025184	R3hcc1l	1700036B12Rik|AI450607|C10orf28|D19Ertd386e|GIDRP86|Gidrp88	R3H domain and coiled-coil containing 1 like	protein-coding
unique_peak2-38582-0-4--3.16205902536157-1.10720996964787	chr7	67597804	67598228	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-312911	NM_001082962	20646	Mm.274995	NM_013670	ENSMUSG00000000948	Snrpn	2410045I01Rik|HCERN3|Peg4|Pwcr1|SMN	small nuclear ribonucleoprotein N	protein-coding
common_peak1-8591-20-14-0.581184188982674-0.690311289528838	chr10	108332810	108333444	+	0	NA	intron (NM_009306, intron 2 of 10)	L1_Mus2|LINE|L1	114904	NM_009306	20979	Mm.289702	NM_009306	ENSMUSG00000035864	Syt1	AW124717|G630098F17Rik|SytI	synaptotagmin I	protein-coding
common_peak1-8959-28-24-0.409102930046738-0.610902792227729	chr11	55428377	55429454	+	0	NA	Intergenic	Intergenic	-7215	NM_020492	14654	Mm.89320	NM_020492		Glra1	nmf11|oscillator|ot|spasmodic|spd	glycine receptor, alpha 1 subunit	protein-coding
common_peak2-30396-16-20--0.274053780510699-0.353907621462756	chr7	34132498	34133223	+	0	NA	Intergenic	IAPEY3-int|LTR|ERVK	18478	NM_001009952	494519	Mm.389857	NM_001009952	ENSMUSG00000094305	Scgb2b20	Abpbg20|Abpd|C2c|Scgb2b2	secretoglobin, family 2B, member 20	protein-coding
common_peak2-20115-27-13-1.18419102883763-2.09887956687855	chr1	162132485	162133264	+	0	NA	3' UTR (NM_009786, exon 6 of 6)	3' UTR (NM_009786, exon 6 of 6)	7483	NM_025474	64659	Mm.29599	NM_025474		Mrps14	1810032L21Rik|AL022847|Rpms14	mitochondrial ribosomal protein S14	protein-coding
unique_peak2-35074-18-39--1.00900894365901-1.65365064026544	chr16	15886672	15888132	+	0	NA	promoter-TSS (NM_007679)	promoter-TSS (NM_007679)	23	NM_007679	12609	Mm.347407	NM_007679		Cebpd	-	CCAAT/enhancer binding protein (C/EBP), delta	protein-coding
common_peak2-26694-42-53--0.0125581742962844-0.303059438674689	chr2	126932977	126933790	+	0	NA	intron (NM_144818, intron 14 of 17)	B1_Mur3|SINE|Alu	26307	NM_144818	215387	Mm.29786	NM_144818	ENSMUSG00000034906	Ncaph	A730011O11Rik|Brrn1|HCAP-H|mKIAA0074	non-SMC condensin I complex, subunit H	protein-coding
unique_peak1-5305-17-7-1.21829633820504-1.55050753388977	chr5	74943916	74944876	+	0	NA	intron (NM_024183, intron 8 of 16)	intron (NM_024183, intron 8 of 16)	12889	NM_001159574	66899	Mm.272468	NM_024183	ENSMUSG00000029227	Fip1l1	1300019H17Rik|Rje	FIP1 like 1 (S. cerevisiae)	protein-coding
unique_peak1-2174-12-2-2.06381348436648-2.79529063155376	chr15	61530186	61530848	+	0	NA	TTS (NR_040350)	TTS (NR_040350)	75489	NR_040350	432956	Mm.404918	NR_040350		D030024E09Rik	-	RIKEN cDNA D030024E09 gene	ncRNA
common_peak1-9461-9-18--1.05831410703937-0.965105923112245	chr11	103412126	103412655	+	0	NA	intron (NM_001033434, intron 7 of 13)	(GAGAA)n|Simple_repeat|Simple_repeat	63663	NM_001033434	380730	Mm.380214	NM_001033434	ENSMUSG00000034239	Gm884	LRRC37	predicted gene 884	protein-coding
unique_peak2-37182-3-5--0.998945590680433-0.96108193396963	chr4	54947970	54948394	+	0	NA	Intergenic	Intergenic	-12635	NM_172867	242466	Mm.102904	NM_172867	ENSMUSG00000060206	Zfp462	6030417H05|9430078C22Rik|Gt4-2|Zfpip	zinc finger protein 462	protein-coding
unique_peak1-7006-9-1-2.18961340640422-2.31132995230379	chr8	122918178	122918741	+	0	NA	Intergenic	B1F1|SINE|Alu	-94307	NM_198671	382034	Mm.334856	NM_198671	ENSMUSG00000031822	Gse1	2210013I18Rik|mKIAA0182	genetic suppressor element 1	protein-coding
unique_peak1-1137-8-3-1.00522241794757-1.39487600375387	chr11	96849817	96850168	+	0	NA	Intergenic	Intergenic	-10990	NM_001080964	78912	Mm.491183	NM_030220	ENSMUSG00000018678	Sp2	4930480I16Rik|mKIAA0048	Sp2 transcription factor	protein-coding
common_peak2-24358-34-32-0.337674407642813-0.595371917655143	chr17	6476475	6477265	+	0	NA	Intergenic	Intergenic	-26728	NR_033520	547127	Mm.297552	NM_001045538		Tmem181b-ps	Tmem181b	transmembrane protein 181B, pseudogene	pseudo
common_peak2-23045-15-21--0.447266868081641-0.448200956659578	chr14	69815527	69816280	+	0	NA	Intergenic	Intergenic	7154	NM_010921	18095	Mm.3520	NM_010921	ENSMUSG00000022061	Nkx3-1	Bax|NKX3.1|NKX3A|Nkx-3.1|bagpipe	NK-3 transcription factor, locus 1 (Drosophila)	protein-coding
unique_peak1-2378-18-9-0.990991056340989-1.23014042908325	chr15	95886011	95886739	+	0	NA	Intergenic	Intergenic	23608	NR_003627	402773	Mm.210567	NM_001033483		D030018L15Rik	-	nuclear receptor coactivator 2 pseudogene	pseudo
unique_peak2-37201-10-13--0.450939577048835-0.386243247519795	chr4	62360710	62361250	+	0	NA	intron (NM_134257, intron 12 of 15)	intron (NM_134257, intron 12 of 15)	80274	NM_134257	50780	Mm.286753	NM_019492	ENSMUSG00000059810	Rgs3	4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S	regulator of G-protein signaling 3	protein-coding
common_peak1-9956-27-44--0.500307145434439-0.714193724415661	chr12	111758222	111759164	+	0	NA	intron (NM_001081457, intron 1 of 12)	intron (NM_001081457, intron 1 of 12)	34744	NM_012023	26931	Mm.240396	NM_012023	ENSMUSG00000017843	Ppp2r5c	2610043M05Rik|2700063L20Rik|AI060890|AW545884|C85228|D12Bwg0916e|mKIAA0044	protein phosphatase 2, regulatory subunit B', gamma	protein-coding
common_peak2-20766-13-7-0.778472030637769-0.817533494790411	chr10	116301067	116301468	+	0	NA	intron (NM_001033333, intron 1 of 24)	intron (NM_001033333, intron 1 of 24)	32668	NM_001033333	237558	Mm.336386	NM_001033333	ENSMUSG00000034057	Myrfl	Gm239	myelin regulatory factor-like	protein-coding
common_peak1-12625-24-45--0.730352053289296-1.16863888781394	chr18	33213297	33214020	+	0	NA	intron (NM_009793, intron 1 of 10)	intron (NM_009793, intron 1 of 10)	114963	NM_009793	12326	Mm.222329	NM_009793	ENSMUSG00000038128	Camk4	A430110E23Rik|AI666733|CaMKIV|CaMKIV/Gr|D18Bwg0362e	calcium/calmodulin-dependent protein kinase IV	protein-coding
unique_peak2-36884-3-5--0.998945590680433-0.96108193396963	chr3	95280605	95280854	+	0	NA	intron (NM_001037737, intron 8 of 21)	B3|SINE|B2	-22403	NM_007802	13038	Mm.272085	NM_007802	ENSMUSG00000028111	Ctsk	AI323530|MMS10-Q|Ms10q|catK	cathepsin K	protein-coding
common_peak1-14998-8-5-0.420259917226415-1.10484139239135	chr3	108561542	108561971	+	0	NA	intron (NM_177859, intron 5 of 11)	intron (NM_177859, intron 5 of 11)	19180	NM_177859	329738	Mm.72322	NM_177859	ENSMUSG00000049565	Aknad1	4921525H12Rik	AKNA domain containing 1	protein-coding
unique_peak2-36308-10-9-0.0344872501214071-1.05503135781948	chr2	75644024	75644501	+	0	NA	Intergenic	Intergenic	-25972	NM_172666	228061	Mm.31227	NM_172666	ENSMUSG00000042410	Agps	5832437L22|9930035G10Rik|AW123847|Adaps|Adas|Adhaps|Adps|Aldhpsy|bs2	alkylglycerone phosphate synthase	protein-coding
common_peak2-20041-37-47--0.0589694292353373-0.303364957229384	chr1	139421636	139422746	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-440841	NR_029795	735252		NR_029795	miRBase:MI0000697	Mir181a-1	Mirn181a-1|Mirn213|miR-213|mmu-mir-213	microRNA 181a-1	ncRNA
unique_peak1-3784-10-0-3.35641534500877-3.31132995230379	chr19	55851253	55851814	+	0	NA	intron (NM_001142920, intron 4 of 11)	MTC|LTR|MaLR	35233	NM_001142923	21416	Mm.139815	NM_009333	ENSMUSG00000024985	Tcf7l2	TCF4B|TCF4E|Tcf-4|Tcf4|mTcf-4B|mTcf-4E	transcription factor 7 like 2, T cell specific, HMG box	protein-coding
common_peak1-13861-10-12--0.344024373132323-0.340565874754526	chr2	66256235	66256756	+	0	NA	intron (NM_018733, intron 1 of 26)	Lx9|LINE|L1	22399	NM_018733	20265	Mm.439704	NM_018733	ENSMUSG00000064329	Scn1a	B230332M13|Nav1.1	sodium channel, voltage-gated, type I, alpha	protein-coding
common_peak1-10341-54-86--0.269857734218994-0.570756121772392	chr13	75707341	75708816	+	0	NA	Intergenic	RodERV21-int|LTR|ERV1	-74416	NR_030451	751556		NR_030451	miRBase:MI0004644	Mir682	Mirn682|mir-682|mmu-mir-682	microRNA 682	ncRNA
common_peak1-13915-16-7-1.11826364226806-1.23399803405144	chr2	83759051	83759834	+	0	NA	intron (NM_027964, intron 6 of 8)	intron (NM_027964, intron 6 of 8)	21941	NM_027964	71861	Mm.116957	NM_027964	ENSMUSG00000034552	Zswim2	1700025P14Rik|4933437F18Rik|MEX	zinc finger SWIM-type containing 2	protein-coding
unique_peak1-5793-74-12-3.01544685883752-18.7188450189638	chr6	59411847	59414476	+	0	NA	Intergenic	L1Md_T|LINE|L1	-36877	NM_183183	243385	Mm.138080	NM_183183	ENSMUSG00000045441	Gprin3	C030038J10Rik|C730021L23	GPRIN family member 3	protein-coding
common_peak1-13688-22-28--0.210696890040167-0.337923771396236	chr2	29965021	29966123	+	0	NA	intron (NM_178694, intron 5 of 15)	PB1D9|SINE|Alu	14559	NM_178694	227693	Mm.44526	NM_178694	ENSMUSG00000039686	Zer1	C230075L19Rik|Zyg11bl	zyg-11 related, cell cycle regulator	protein-coding
common_peak1-19375-9-11--0.395349094316936-0.344532117358383	chrX	23693045	23693554	+	0	NA	Intergenic	RodERV21-int|LTR|ERV1	223410	NM_001034864	236749	Mm.296422	NM_001034864	ENSMUSG00000068113	Gm4907	EG236749	predicted gene 4907	protein-coding
common_peak1-13645-19-15-0.402687326661686-0.519193887192487	chr2	26236666	26237528	+	0	NA	promoter-TSS (NM_172339)	promoter-TSS (NM_172339)	-924	NM_001290419	227644	Mm.207460	NM_172339	ENSMUSG00000036281	Snapc4	5730436L13Rik	small nuclear RNA activating complex, polypeptide 4	protein-coding
unique_peak2-35929-0-8--4.01005593191652-2.05605744720049	chr19	7201990	7202486	+	0	NA	intron (NM_134147, intron 3 of 10)	RSINE1|SINE|B4	-22019	NM_201411	396184	Mm.386930	NM_201411	ENSMUSG00000047787	Flrt1	AW742165|D630040I23Rik	fibronectin leucine rich transmembrane protein 1	protein-coding
common_peak1-10828-31-11-1.64027617009197-3.52967372072617	chr14	101803502	101804756	+	0	NA	Intergenic	L1Md_F3|LINE|L1	204279	NM_001081278	210789	Mm.320639	NM_173380	ENSMUSG00000033083	Tbc1d4	5930406J04Rik|A930035N22|AV295684|As160	TBC1 domain family, member 4	protein-coding
common_peak1-13347-12-9-0.326847890200276-0.459837087125828	chr19	44314031	44314599	+	0	NA	intron (NM_024450, intron 5 of 5)	B2_Mm1a|SINE|B2	36537	NM_024450	30049	Mm.480594	NM_024450	ENSMUSG00000025202	Scd3	4930513N16Rik	stearoyl-coenzyme A desaturase 3	protein-coding
unique_peak1-6099-10-3-1.35641534500877-1.75805390616669	chr6	125420952	125421561	+	0	NA	intron (NM_007657, intron 2 of 7)	intron (NM_007657, intron 2 of 7)	23517	NM_007657	12527	Mm.210676	NM_007657	ENSMUSG00000030342	Cd9	Tspan29	CD9 antigen	protein-coding
common_peak2-23794-19-19-0.0807592317743238-0.322753776620787	chr15	99771654	99772373	+	0	NA	Intergenic	Intergenic	-9924	NM_028180	72277	Mm.272766	NM_028180	ENSMUSG00000045350	1700030F18Rik	FAM186A	RIKEN cDNA 1700030F18 gene	protein-coding
unique_peak1-85-11-2-1.92373108353046-2.32232533660526	chr1	43218187	43218804	+	0	NA	intron (NM_001289533, intron 1 of 5)	ORR1C2|LTR|MaLR	2311	NM_010212	14200	Mm.6799	NM_010212	ENSMUSG00000008136	Fhl2	FHL-2|SLIM-3|SLIM3	four and a half LIM domains 2	protein-coding
common_peak2-32414-56-102--0.450904701743975-1.19888335624195	chrX	160137543	160139123	+	0	NA	Intergenic	RSINE1|SINE|B4	60931	NM_028842	74264	Mm.39304	NM_028842	ENSMUSG00000083695	Rnf138rt1	-	ring finger protein 138, retrogene 1	protein-coding
common_peak2-26284-8-17--1.16470258349474-1.02063122982878	chr2	30864813	30865674	+	0	NA	intron (NM_028846, intron 10 of 24)	intron (NM_028846, intron 10 of 24)	27444	NM_028846	74270	Mm.346654	NM_028846	ENSMUSG00000026854	Usp20	1700055M05Rik|AI467231|Vdu2	ubiquitin specific peptidase 20	protein-coding
common_peak2-28753-23-14-0.814876908900562-1.09492971584134	chr5	41843788	41844355	+	0	NA	Intergenic	L2|LINE|L2	255323	NM_027295	100972	Mm.41555	NM_027295	ENSMUSG00000029128	Rab28	2700023P08Rik|AW496496	RAB28, member RAS oncogene family	protein-coding
common_peak1-14831-28-18-0.805031606377877-1.27334590136207	chr3	90706770	90708239	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-168080	NR_033593	619677	Mm.396622	NR_033593	ENSMUSG00000086377	4930529C04Rik	-	zinc finger, BED domain containing 4 pseudogene	pseudo
common_peak1-12556-10-14--0.550475250599749-0.446472590016315	chr18	8651228	8651823	+	0	NA	Intergenic	RMER17B|LTR|ERVK	-561329	NM_008058	14370	Mm.184289	NM_008058	ENSMUSG00000036904	Fzd8	Fz8	frizzled homolog 8 (Drosophila)	protein-coding
common_peak2-29032-7-15--1.20090916970181-0.947446088118041	chr5	114127442	114128115	+	0	NA	Intergenic	Intergenic	-27379	NM_008153	14747	Mm.5196	NM_008153	ENSMUSG00000042190	Cmklr1	ChemR23|DEZ|Gpcr27|mcmklr1	chemokine-like receptor 1	protein-coding
common_peak1-11676-16-8-0.948338640825749-1.02063122982878	chr16	25834975	25835746	+	0	NA	intron (NM_001127261, intron 4 of 10)	intron (NM_001127261, intron 4 of 10)	33358	NM_001127264	22061	Mm.20894	NM_011641	ENSMUSG00000022510	Trp63	AI462811|Ket|P51/P63|P63|P73l|Tp63|Trp53rp1	transformation related protein 63	protein-coding
unique_peak1-6427-6-1-1.5653981103803-1.56314192529759	chr7	93163622	93164144	+	0	NA	Intergenic	MURVY-int|LTR|ERV1	-53891	NM_001105187	546980	Mm.469905	NM_001105187	ENSMUSG00000090774	Vmn2r74	EG546980	vomeronasal 2, receptor 74	protein-coding
unique_peak1-1163-11-4-1.18676548936425-1.68134727924692	chr11	99102476	99103005	+	0	NA	intron (NM_172946, intron 1 of 5)	intron (NM_172946, intron 1 of 5)	2641	NM_172946	268481	Mm.133193	NM_172946	ENSMUSG00000035849	Krt222	6330509G02Rik	keratin 222	protein-coding
common_peak1-13177-85-93-0.400814396447013-1.26597998525012	chr19	16131702	16133825	+	0	NA	Intergenic	Intergenic	73198	NR_045355	100502653	Mm.149980	NR_045355	ENSMUSG00000097557	C130060C02Rik	-	RIKEN cDNA C130060C02 gene	ncRNA
unique_peak2-36582-0-8--4.01005593191652-2.05605744720049	chr2	175337690	175338163	+	0	NA	Intergenic	Intergenic	42365	NM_001242943	100190996	Mm.484023	NM_001242943		Gm14436	OTTMUSG00000016614	predicted gene 14436	protein-coding
common_peak1-10223-10-7-0.356415345008769-1.12966497611638	chr13	51637223	51637680	+	0	NA	intron (NM_009167, intron 1 of 11)	B3A|SINE|B2	25002	NM_009167	20418	Mm.131870	NM_009167	ENSMUSG00000021448	Shc3	N-Shc|Rai|ShcC	src homology 2 domain-containing transforming protein C3	protein-coding
common_peak2-20187-15-18--0.235762762887929-0.326591483156968	chr1	172376553	172377262	+	0	NA	intron (NM_027528, intron 2 of 7)	B3A|SINE|B2	110334	NM_027528	70729	Mm.487078	NM_027528	ENSMUSG00000038473	Nos1ap	6330408P19Rik|Capon	nitric oxide synthase 1 (neuronal) adaptor protein	protein-coding
common_peak1-19211-10-19--0.965512749878593-0.917676348953458	chr9	105494367	105494941	+	0	NA	Intergenic	GA-rich|Low_complexity|Low_complexity	-50671	NM_001081309	75669	Mm.274830	NM_029380	ENSMUSG00000032571	Pik3r4	2210010O15Rik|C730038E05Rik|C85833|D9Ertd418e	phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 4, p150	protein-coding
common_peak1-10176-10-15--0.643584654991231-0.519648556297791	chr13	40913239	40913767	+	0	NA	Intergenic	Intergenic	-41634	NM_023887	14538	Mm.314757	NM_008105	ENSMUSG00000021360	Gcnt2	5330430K10Rik|IGnT|IGnTA|IGnTB|IGnTC	glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	protein-coding
unique_peak2-39004-14-18--0.348711353085941-0.360333814299795	chr8	46882957	46883886	+	0	NA	intron (NM_172752, intron 15 of 22)	B3|SINE|B2	21230	NR_045739	319940	Mm.441720	NR_045739	ENSMUSG00000085440	Sorbs2os	D330022K07Rik	sorbin and SH3 domain containing 2, opposite strand	ncRNA
unique_peak1-1035-7-2-1.21412832957703-1.45399745587252	chr11	76588080	76588608	+	0	NA	Intergenic	PB1D10|SINE|Alu	-11287	NM_016810	53334	Mm.20931	NM_016810	ENSMUSG00000010392	Gosr1	AI414660|AI426320|BB145494|GOS-28|GOSRI|GS28	golgi SNAP receptor complex member 1	protein-coding
unique_peak1-2517-13-3-1.77847203063777-2.58603100924543	chr16	20192206	20192921	+	0	NA	intron (NM_001033237, intron 12 of 29)	RMER15|LTR|ERVL	-16256	NR_030454	735274		NR_030454		Mir684-1	Mirn684-1	microRNA 684-1	ncRNA
common_peak1-16264-42-49-0.0984731380924595-0.353756356258769	chr5	107868310	107869425	+	0	NA	intron (NM_001255991, intron 1 of 8)	intron (NM_001255991, intron 1 of 8)	1851	NM_001255991	100503185	Mm.366650	NM_001255991	ENSMUSG00000070632	Btbd8	EG627196|Gm16115|OTTMUSG00000030610	BTB (POZ) domain containing 8	protein-coding
unique_peak1-4626-8-1-2.00522241794757-2.05605744720049	chr3	79448584	79449077	+	0	NA	exon (NM_212452, exon 18 of 18)	exon (NM_212452, exon 18 of 18)	15829	NM_029482	75939	Mm.221520	NM_029482	ENSMUSG00000027811	4930579G24Rik	-	RIKEN cDNA 4930579G24 gene	protein-coding
common_peak2-27880-11-23--1.07626891646954-1.24082643394777	chr4	88784878	88785542	+	0	NA	intron (NM_024433, intron 1 of 7)	B4A|SINE|B4	1936	NM_024433	66902	Mm.28500	NM_024433	ENSMUSG00000062937	Mtap	1300019I21Rik|MSAP	methylthioadenosine phosphorylase	protein-coding
unique_peak1-2509-24-12-1.09277018462662-1.73042999925837	chr16	15983662	15984934	+	0	NA	intron (NM_146068, intron 8 of 19)	Lx|LINE|L1	96919	NM_007679	12609	Mm.347407	NM_007679		Cebpd	-	CCAAT/enhancer binding protein (C/EBP), delta	protein-coding
common_peak1-14069-31-43--0.234192947824174-0.398838069828027	chr2	120609166	120609989	+	0	NA	intron (NM_001024856, intron 6 of 15)	intron (NM_001024856, intron 6 of 15)	-52324	NM_026891	68968	Mm.2289	NM_026891	ENSMUSG00000027284	Cdan1	1500015A01Rik|AI448026|AW492297|CDA-I|CDA1|CDAI	congenital dyserythropoietic anemia, type I (human)	protein-coding
unique_peak2-37903-10-16--0.73104749624157-0.604422558181019	chr5	142894779	142895561	+	0	NA	intron (NM_199068, intron 1 of 8)	RSINE1|SINE|B4	17719	NM_199068	17425	Mm.24214	NM_010812	ENSMUSG00000056493	Foxk1	A630048H08Rik|AI463295|ENSMUSG00000075577|Gm10868|Mnf	forkhead box K1	protein-coding
unique_peak2-34424-5-7--0.704380336005853-1.01466476204226	chr14	20229143	20229634	+	0	NA	Intergenic	Intergenic	192421	NM_001024706	432825	Mm.327147	NM_001024706	ENSMUSG00000095024	Gm5458	EG432825	predicted gene 5458	protein-coding
unique_peak1-6451-19-8-1.23276232521937-1.61268301619756	chr7	99535389	99536200	+	0	NA	intron (NM_001243047, intron 4 of 10)	intron (NM_001243047, intron 4 of 10)	152314	NM_001243047	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
common_peak2-21105-26-23-0.342936591437306-0.502376547007663	chr11	52077191	52077975	+	0	NA	intron (NM_009331, intron 1 of 8)	intron (NM_009331, intron 1 of 8)	18169	NM_009331	21414	Mm.31630	NM_009331	ENSMUSG00000000782	Tcf7	AI465550|TCF-1|Tcf1	transcription factor 7, T cell specific	protein-coding
unique_peak1-5475-8-3-1.00522241794757-1.39487600375387	chr5	126716331	126716785	+	0	NA	Intergenic	RSINE1|SINE|B4	703770	NM_001190352	208151	Mm.40397	NM_001190352	ENSMUSG00000070498	Tmem132b	AK220418|mKIAA1786	transmembrane protein 132B	protein-coding
unique_peak1-3837-10-3-1.35641534500877-1.75805390616669	chr2	3754185	3754759	+	0	NA	Intergenic	B1_Mm|SINE|Alu	123742	NM_025626	66540	Mm.277864	NM_025626	ENSMUSG00000026655	Fam107b	3110001A13Rik|AA589595|AA959793|AI132312	family with sequence similarity 107, member B	protein-coding
common_peak2-20223-17-31--0.781703661794962-0.932560489028298	chr1	180812728	180813511	+	0	NA	intron (NM_001161665, intron 9 of 14)	intron (NM_001161665, intron 9 of 14)	353863	NM_001161665	269152	Mm.129727	NM_177724	ENSMUSG00000026494	Kif26b	4832420M10|BC056349|D230039L06Rik	kinesin family member 26B	protein-coding
common_peak1-13144-15-12-0.311725032414564-0.425539671739611	chr19	10101015	10101774	+	0	NA	intron (NM_144538, intron 2 of 9)	B1_Mm|SINE|Alu	8676	NM_144538	74760	Mm.281969	NM_144538	ENSMUSG00000024663	Rab3il1	1200014K04Rik|AI115013|C76746|Rab3ail1	RAB3A interacting protein (rabin3)-like 1	protein-coding
common_peak2-24760-30-43--0.289756209145424-0.435893058718175	chr17	56109111	56110375	+	0	NA	promoter-TSS (NM_009168)	promoter-TSS (NM_009168)	-162	NM_001159523	20420	Mm.20908	NM_009168	ENSMUSG00000039154	Shd	AI413439	src homology 2 domain-containing transforming protein D	protein-coding
common_peak1-18822-64-103--0.234993316432488-0.557095317016001	chr9	7836143	7837901	+	0	NA	Intergenic	CpG	-1767	NM_007465	11797	Mm.335659	NM_007465	ENSMUSG00000057367	Birc2	AW146227|Api1|Api2|Birc3|HIAP1|HIAP2|IAP1|IAP2|MIAP1|MIAP2|MIHB|MIHC|RNF48|cIAP1|cIAP2|mcIAP1	baculoviral IAP repeat-containing 2	protein-coding
common_peak2-24905-11-9-0.186765489364251-0.344532117358383	chr17	84140995	84141473	+	0	NA	intron (NM_001171053, intron 4 of 13)	intron (NM_001171053, intron 4 of 13)	35731	NM_001171052	116871	Mm.277668	NM_054082	ENSMUSG00000055817	Mta3	1110002J22Rik|mKIAA1266	metastasis associated 3	protein-coding
common_peak2-25690-81-94-0.302193994677618-0.846525075623431	chr19	16132090	16133866	+	0	NA	Intergenic	Intergenic	73413	NR_045355	100502653	Mm.149980	NR_045355	ENSMUSG00000097557	C130060C02Rik	-	RIKEN cDNA C130060C02 gene	ncRNA
common_peak2-30294-13-18--0.469455482805817-0.409888142029227	chr7	19271888	19272591	+	0	NA	promoter-TSS (NM_054058)	promoter-TSS (NM_054058)	-898	NM_054058	434540	Mm.479863	NM_054058		Psg20	Cea7|EG434540	pregnancy-specific glycoprotein 20	protein-coding
unique_peak1-880-9-1-2.18961340640422-2.31132995230379	chr11	31897683	31898182	+	0	NA	Intergenic	MTEa|LTR|MaLR	-2487	NM_008741	18197	Mm.3304	NM_008741	ENSMUSG00000020297	Nsg2	-	neuron specific gene family member 2	protein-coding
unique_peak2-39444-0-6--3.64748585253182-1.56314192529759	chr9	47675815	47676239	+	0	NA	Intergenic	Intergenic	-49736	NR_046048	100038460	Mm.447649	NR_046048		Gm10677	ENSMUSG00000074363	predicted gene 10677	ncRNA
common_peak1-11872-86-90-0.467841153833657-1.61001334483496	chr16	94312491	94313869	+	0	NA	intron (NM_011377, intron 7 of 10)	intron (NM_011377, intron 7 of 10)	196283	NM_139145	110948	Mm.30921	NM_139145	ENSMUSG00000040820	Hlcs	410I21.SP6|D16Jhu34	holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase)	protein-coding
common_peak2-27087-15-13-0.204809828498052-0.368541233333383	chr3	90602866	90603567	+	0	NA	Intergenic	L1Md_F3|LINE|L1	72388	NM_207263	384997	Mm.316644	NM_207263	ENSMUSG00000042250	Pglyrp4	Gm1478|Gm413	peptidoglycan recognition protein 4	protein-coding
unique_peak1-6753-8-0-3.00522241794757-2.70926996097583	chr8	54590118	54590639	+	0	NA	Intergenic	Intergenic	-6678	NM_001205054	11593	Mm.334535	NM_001005847	ENSMUSG00000031521	Aga	AW060726	aspartylglucosaminidase	protein-coding
unique_peak2-37052-5-9--1.02630843089322-1.21398586181642	chr3	137863691	137864135	+	0	NA	Intergenic	L1Md_A|LINE|L1	-14236	NM_001163386	67741	Mm.383221	NM_001163385	ENSMUSG00000012042	4930579F01Rik	-	RIKEN cDNA 4930579F01 gene	protein-coding
common_peak2-26619-23-37--0.526160008934505-0.720235944639228	chr2	118109886	118110996	+	0	NA	intron (NM_201367, intron 1 of 2)	intron (NM_201367, intron 1 of 2)	-20209	NR_045919	73358	Mm.437192	NR_045919	ENSMUSG00000085889	1700054M17Rik	-	RIKEN cDNA 1700054M17 gene	ncRNA
common_peak1-8220-11-7-0.508693584251613-1.21681515183528	chr10	9502973	9503450	+	0	NA	intron (NM_001081344, intron 19 of 25)	intron (NM_001081344, intron 19 of 25)	98691	NR_038036	620417	Mm.378085	NR_038036		Gm6150	-	predicted gene 6150	ncRNA
unique_peak2-33067-7-7--0.200909169701811-0.97990265578305	chr10	78338410	78338842	+	0	NA	intron (NM_207571, intron 1 of 1)	intron (NM_207571, intron 1 of 1)	332	NM_207571	257734	Mm.334149	NM_207571	ENSMUSG00000062873	Olfr1355	GA_x5J8B7W4DUT-12263-11330|MOR139-6	olfactory receptor 1355	protein-coding
common_peak2-27468-8-12--0.695217300193522-0.475924844171029	chr3	90601928	90602594	+	0	NA	Intergenic	L1Md_F3|LINE|L1	71433	NM_207263	384997	Mm.316644	NM_207263	ENSMUSG00000042250	Pglyrp4	Gm1478|Gm413	peptidoglycan recognition protein 4	protein-coding
common_peak2-30397-9-15--0.81038659359578-0.630231561310125	chr7	34168076	34168543	+	0	NA	Intergenic	Intergenic	10056	NM_001270543	545948	Mm.349644	NM_001270543		Scgb1b20	EG545948|Gm5895	secretoglobin, family 1B, member 20	protein-coding
unique_peak2-38604-4-8--1.19338551529556-1.21878474469819	chr7	79785982	79786401	+	0	NA	Intergenic	IAPLTR1a_Mm|LTR|ERVK	-334710	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding
common_peak2-28819-43-80--0.557286817360922-1.31216754501451	chr5	65491746	65493416	+	0	NA	Intergenic	Intergenic	-29889	NM_175174	71778	Mm.10281	NM_175174	ENSMUSG00000054920	Klhl5	1300013C10Rik	kelch-like 5	protein-coding
unique_peak2-39266-3-4--0.73591118484664-0.864171920961574	chr8	120304672	120305073	+	0	NA	Intergenic	Intergenic	20957	NM_026758	68533	Mm.181836	NM_026758	ENSMUSG00000031843	Mphosph6	1110001M01Rik|AA536809|C86426	M phase phosphoprotein 6	protein-coding
common_peak1-13465-47-26-1.17995392260308-3.44689162350861	chr19	60888779	60890358	+	0	NA	intron (NM_026437, intron 1 of 8)	ID4|SINE|ID	2095	NM_001167829	67894	Mm.26148	NM_026437	ENSMUSG00000024993	Fam45a	1810055E12Rik	family with sequence similarity 45, member A	protein-coding
unique_peak1-5290-8-4-0.683294323060208-1.21878474469819	chr5	66503425	66503979	+	0	NA	intron (NM_001127382, intron 2 of 7)	intron (NM_001127382, intron 2 of 7)	-14284	NM_139065	245945	Mm.36863	NM_139065	ENSMUSG00000070780	Rbm47	9530077J19Rik	RNA binding motif protein 47	protein-coding
common_peak2-26437-8-11--0.579740082773585-1.14218153353838	chr2	66256189	66256599	+	0	NA	intron (NM_018733, intron 1 of 26)	Lx9|LINE|L1	22500	NM_018733	20265	Mm.439704	NM_018733	ENSMUSG00000064329	Scn1a	B230332M13|Nav1.1	sodium channel, voltage-gated, type I, alpha	protein-coding
common_peak1-18883-28-16-0.965496278571123-1.60877160026697	chr9	32595160	32596292	+	0	NA	Intergenic	Intergenic	92099	NM_001038642	23871	Mm.292415	NM_011808	ENSMUSG00000032035	Ets1	AI196000|AI448617|D230050P06|Ets-1|Tpl1	E26 avian leukemia oncogene 1, 5' domain	protein-coding
unique_peak2-37436-9-13--0.617741515653384-0.459837087125828	chr4	152325239	152325721	+	0	NA	Intergenic	Intergenic	253831	NR_033138	330004	Mm.291863	NM_001033414		Gm833	-	predicted gene 833	ncRNA
unique_peak1-286-11-6-0.701338662194009-1.32595962126035	chr1	118388188	118388700	+	0	NA	intron (NM_001077425, intron 19 of 23)	L1Md_T|LINE|L1	806730	NM_001077425	636808	Mm.101576	NM_001077425	ENSMUSG00000070695	Cntnap5a	Caspr5-1|EG636808	contactin associated protein-like 5A	protein-coding
unique_peak2-34988-7-7--0.200909169701811-0.97990265578305	chr15	99392317	99392775	+	0	NA	Intergenic	B4|SINE|B4	-16941	NM_009699	11827	Mm.20206	NM_009699	ENSMUSG00000023013	Aqp2	AQP-CD|WCH-CD|cph|jpk	aquaporin 2	protein-coding
common_peak1-11999-33-19-1.00940946763817-1.9602491241746	chr17	13668013	13669456	+	0	NA	Intergenic	ID4|SINE|ID	-45588	NR_030763	272667	Mm.444718	NR_030763	ENSMUSG00000079711	Smok4a	4930513D10Rik|Smok2c	sperm motility kinase 4A	pseudo
common_peak1-16319-10-10--0.103016273628528-0.301029995663987	chr5	115514508	115515126	+	0	NA	intron (NM_029012, intron 2 of 10)	intron (NM_029012, intron 2 of 10)	43154	NM_001271591	100502825	Mm.361657	NM_001271590		Gm13826	OTTMUSG00000014624	predicted gene 13826	protein-coding
common_peak2-20867-70-74-0.391148225879518-1.03059905972714	chr11	98794315	98796594	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-3556	NM_009024	19401	Mm.439744	NM_009024	ENSMUSG00000037992	Rara	Nr1b1|RAR|RARalpha1	retinoic acid receptor, alpha	protein-coding
common_peak1-11165-9-17--0.980311595038092-0.844317084070804	chr15	76195709	76196262	+	0	NA	Intergenic	Intergenic	-3343	NM_021555	59053	Mm.133202	NM_021555	ENSMUSG00000022554	Hgh1	Brp16|D15Ertd741e|Fam203a	HGH1 homolog	protein-coding
common_peak1-10747-14-9-0.577288065470282-0.630231561310125	chr14	69267375	69267897	+	0	NA	intron (NR_102399, intron 1 of 21)	intron (NR_102399, intron 1 of 21)	6263	NM_010082	13522	Mm.117450	NM_010082	ENSMUSG00000014725	Adam28	C130072N01Rik|D430033C21Rik|Dtgn1|MDC-L|MDC-Lm|MDC-Ls|MDCL|TECADAM|eMDCII	a disintegrin and metallopeptidase domain 28	protein-coding
unique_peak1-4477-15-0-4.01216475055566-5.11750992628768	chr3	37994283	37994885	+	0	NA	Intergenic	L1Md_F2|LINE|L1	112457	NR_040541	71342	Mm.410782	NR_040541		5430434I15Rik	-	RIKEN cDNA 5430434I15 gene	ncRNA
unique_peak2-37058-8-14--0.901668177660948-0.660903317613906	chr3	138488839	138489448	+	0	NA	intron (NR_121195, intron 1 of 7)	intron (NR_121195, intron 1 of 7)	83971	NM_019571	56224	Mm.31927	NM_019571	ENSMUSG00000028152	Tspan5	2810455A09Rik|4930505M03Rik|NET-4|Tm4sf9	tetraspanin 5	protein-coding
unique_peak2-36908-5-6--0.511735258063458-0.947717972411649	chr3	97628778	97629140	+	0	NA	intron (NM_001289702, intron 3 of 45)	intron (NM_001289702, intron 3 of 45)	-57022	NM_178080	83679	Mm.129840	NM_031401	ENSMUSG00000038170	Pde4dip	4732458A06Rik|9430063L05Rik|C87016|D130016K21Rik|D3Bwg1078e|Usmg4|mKIAA0454	phosphodiesterase 4D interacting protein (myomegalin)	protein-coding
unique_peak1-35-8-4-0.683294323060208-1.21878474469819	chr1	13426308	13426899	+	0	NA	Intergenic	Intergenic	-62439	NM_008678	17978	Mm.2537	NM_008678	ENSMUSG00000005886	Ncoa2	9530095N19|D1Ertd433e|GRIP-1|Grip1|KAT13C|SRC-2|TIF-2|TIF2|bHLHe75	nuclear receptor coactivator 2	protein-coding
common_peak1-9127-136-158-0.457423719231631-2.38901401712301	chr11	75459330	75462818	+	0	NA	intron (NM_008916, intron 11 of 11)	intron (NM_008916, intron 11 of 11)	-3937	NM_008659	17913	Mm.234502	NM_008659	ENSMUSG00000017774	Myo1c	C80397|MMIb|MYO1E|NMI|mm1beta|myr2	myosin IC	protein-coding
common_peak1-13227-18-16-0.225456309978012-0.397739447719379	chr19	26748254	26748953	+	0	NA	intron (NM_011416, intron 14 of 32)	intron (NM_011416, intron 14 of 32)	68953	NM_011416	67155	Mm.491146	NM_011416	ENSMUSG00000024921	Smarca2	2610209L14Rik|SNF2alpha|Snf2l2|brahma|brm	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	protein-coding
common_peak2-25651-56-45-0.71203386938223-1.94703782389473	chr19	10203628	10204606	+	0	NA	Intergenic	RLTR9E|LTR|ERVK	-28124	NM_019699	56473	Mm.38901	NM_019699	ENSMUSG00000024665	Fads2	2900042M13Rik|Fadsd2	fatty acid desaturase 2	protein-coding
common_peak1-17057-14-6-1.09186123830004-1.16633110333236	chr6	98949453	98950132	+	0	NA	intron (NM_053202, intron 9 of 18)	intron (NM_053202, intron 9 of 18)	28500	NM_001197322	108655	Mm.234965	NM_053202	ENSMUSG00000030067	Foxp1	3110052D19Rik|4932443N09Rik|AI461938|AW494214	forkhead box P1	protein-coding
unique_peak1-1706-6-2-0.980435609659146-1.26211192963361	chr13	92231763	92232288	+	0	NA	intron (NM_009027, intron 9 of 23)	intron (NM_009027, intron 9 of 23)	-215535	NM_198415	76722	Mm.316438	NM_198415	ENSMUSG00000021622	Ckmt2	2300008A19Rik|ScCKmit	creatine kinase, mitochondrial 2	protein-coding
common_peak1-11524-25-22-0.338287949288093-0.51032171069054	chr16	3743080	3743981	+	0	NA	promoter-TSS (NM_148924)	promoter-TSS (NM_148924)	-569	NM_148924	74120	Mm.29081	NM_148924	ENSMUSG00000022529	Zfp263	1200014J04Rik|AI326880|AU020888|NT2|mFPM315	zinc finger protein 263	protein-coding
common_peak1-15639-8-14--0.901668177660948-0.660903317613906	chr4	134551712	134552194	+	0	NA	Intergenic	B4|SINE|B4	65058	NM_026780	68592	Mm.29989	NM_026780	ENSMUSG00000028821	Syf2	1110018L13Rik|Cbpin|D4Bwg1551e|Gcipip|Ntc31|mp29|p29	SYF2 homolog, RNA splicing factor (S. cerevisiae)	protein-coding
unique_peak2-38344-4-5--0.608423014574403-0.909929411522249	chr7	118931356	118931766	+	0	NA	Intergenic	Intergenic	-8070	NM_173739	233733	Mm.323322	NM_173739	ENSMUSG00000038296	Galnt18	2900011G21Rik|BC024988|Galntl4	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 18	protein-coding
unique_peak1-7270-8-2-1.42025991722641-1.65811743852845	chr9	96593883	96594406	+	0	NA	intron (NM_175537, intron 2 of 2)	Charlie1|DNA|MER1_type	37950	NM_175537	245007	Mm.485954	NM_175537	ENSMUSG00000040433	Zbtb38	A930014K01Rik|CIBZ	zinc finger and BTB domain containing 38	protein-coding
common_peak1-8124-80-95-0.265613265648196-0.71527133408291	chr1	185362413	185363997	+	0	NA	Intergenic	Intergenic	478286	NM_016928	53791	Mm.116894	NM_016928	ENSMUSG00000079164	Tlr5	-	toll-like receptor 5	protein-coding
common_peak2-31575-14-13-0.0918612383000403-0.332077462497413	chr8	119558264	119558908	+	0	NA	intron (NM_029686, intron 26 of 42)	ORR1A1|LTR|MaLR	-41237	NM_026572	68133	Mm.258462	NM_026572	ENSMUSG00000034424	Gcsh	1100001L02Rik|5730591C18Rik	glycine cleavage system protein H (aminomethyl carrier)	protein-coding
unique_peak2-33243-11-37--1.73923392919197-3.52967372072617	chr10	125966194	125967235	+	0	NA	Intergenic	Intergenic	371713	NM_026858	68876	Mm.276769	NM_026858	ENSMUSG00000025436	Xrcc6bp1	1110068E08Rik|2410012H02Rik	XRCC6 binding protein 1	protein-coding
unique_peak1-1046-8-1-2.00522241794757-2.05605744720049	chr11	78374645	78375045	+	0	NA	Intergenic	Intergenic	-10608	NM_133706	69071	Mm.29431	NM_133706	ENSMUSG00000037278	Tmem97	1810014L12Rik|AI115531|AL022956|D11Bhm182e	transmembrane protein 97	protein-coding
unique_peak1-5919-15-3-2.01216475055566-3.03427613622886	chr6	89033738	89034408	+	0	NA	Intergenic	MTD|LTR|MaLR	-12036	NM_175017	232217	Mm.281744	NM_175017	ENSMUSG00000055403	4933427D06Rik	-	RIKEN cDNA 4933427D06 gene	protein-coding
common_peak2-28026-15-17--0.157760250886656-0.307611222530528	chr4	53011660	53012323	+	0	NA	intron (NM_028529, intron 4 of 6)	L1Md_T|LINE|L1	9835	NM_028529	73398	Mm.252738	NM_028529	ENSMUSG00000015242	Nipsnap3a	1700054F22Rik|AI429120	nipsnap homolog 3A (C. elegans)	protein-coding
unique_peak2-38933-2-5--1.50241675698448-1.08602067057793	chr8	23190314	23190685	+	0	NA	intron (NM_177898, intron 17 of 19)	B2_Mm2|SINE|B2	19306	NM_183142	207958	Mm.267439	NM_183142	ENSMUSG00000063362	Alg11	AI849156|AW492253|B230397C21|Mmat-4(5)	asparagine-linked glycosylation 11 (alpha-1,2-mannosyltransferase)	protein-coding
unique_peak2-37285-6-11--1.01956439034085-1.32595962126035	chr4	117700850	117701311	+	0	NA	intron (NM_001285521, intron 3 of 10)	(T)n|Simple_repeat|Simple_repeat	-98712	NM_001284192	11876	Mm.56897	NM_009711	ENSMUSG00000028539	Artn	neublastin	artemin	protein-coding
unique_peak2-33325-3-9--1.73591118484664-1.57096726280955	chr11	12430677	12431046	+	0	NA	Intergenic	U1|snRNA|snRNA	-65898	NM_001282993	12808	Mm.22847	NM_172496	ENSMUSG00000020173	Cobl	-	cordon-bleu WH2 repeat	protein-coding
unique_peak1-1963-11-1-2.50869358425161-2.83420869758413	chr14	105803815	105804328	+	0	NA	Intergenic	Intergenic	-22705	NR_045859	71362	Mm.410781	NR_045859		5430440P10Rik	-	RIKEN cDNA 5430440P10 gene	ncRNA
common_peak1-10761-14-7-0.899216160357645-0.947446088118041	chr14	70205836	70206467	+	0	NA	promoter-TSS (NM_153514)	promoter-TSS (NM_153514)	-799	NM_153514	246710	Mm.102367	NM_153514	ENSMUSG00000022075	Rhobtb2	Dbc2|E130206H14Rik|mKIAA0717	Rho-related BTB domain containing 2	protein-coding
unique_peak2-39970-3-14--2.3208736855678-2.58603100924543	chrX	144276321	144276974	+	0	NA	Intergenic	Intergenic	-150889	NM_001198988	666184	Mm.422381	NM_001198988	ENSMUSG00000072931	Gm15080	OTTMUSG00000018964|Ott-like	predicted gene 15080	protein-coding
common_peak1-10367-9-13--0.617741515653384-0.459837087125828	chr13	91808107	91808617	+	0	NA	intron (NM_024186, intron 5 of 15)	intron (NM_024186, intron 5 of 15)	-72764	NM_028790	74156	Mm.275963	NM_028790	ENSMUSG00000021620	Acot12	1300004O04Rik|4930449F15Rik|AV027244|Cach|mCACH-1	acyl-CoA thioesterase 12	protein-coding
common_peak2-25865-18-10-0.853487532591054-1.03889213727317	chr19	43603888	43604355	+	0	NA	Intergenic	URR1A|DNA|MER1_type	-5026	NM_010324	14718	Mm.19039	NM_010324	ENSMUSG00000025190	Got1	AI789014|Got-1|cAspAT|cCAT	glutamate oxaloacetate transaminase 1, soluble	protein-coding
common_peak2-26761-17-33--0.869166503045301-1.12969433525548	chr2	140670338	140671608	+	0	NA	intron (NM_001013802, intron 4 of 18)	intron (NM_001013802, intron 4 of 18)	-173761	NM_178382	71436	Mm.426781	NM_178382	ENSMUSG00000051379	Flrt3	5530600M07Rik|C430047I10Rik|mKIAA1469	fibronectin leucine rich transmembrane protein 3	protein-coding
common_peak1-18641-25-7-1.86184990534511-3.43644803111449	chr8	111360426	111361454	+	0	NA	intron (NM_007496, intron 3 of 9)	MTEa|LTR|MaLR	-99820	NR_037295	100526511		NR_037295		Mir3108	mmu-mir-3108	microRNA 3108	ncRNA
common_peak2-20913-12-5-1.06381348436648-1.78669045979184	chr11	5555174	5555656	+	0	NA	intron (NM_023816, intron 23 of 26)	L1_Mus2|LINE|L1	52287	NM_026080	64660	Mm.7328	NM_026080	ENSMUSG00000020477	Mrps24	3110030K20Rik|AI414579|Rpms24	mitochondrial ribosomal protein S24	protein-coding
unique_peak1-1612-18-8-1.14299414978604-1.45476480588849	chr13	41016276	41017289	+	0	NA	intron (NM_133219, intron 1 of 2)	intron (NM_133219, intron 1 of 2)	3779	NM_133219	14538	Mm.314757	NM_008105	ENSMUSG00000021360	Gcnt2	5330430K10Rik|IGnT|IGnTA|IGnTB|IGnTC	glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	protein-coding
unique_peak1-7355-8-5-0.420259917226415-1.10484139239135	chrX	16952749	16953283	+	0	NA	Intergenic	(TAAA)n|Simple_repeat|Simple_repeat	-56522	NM_028916	74405	Mm.248531	NM_028916	ENSMUSG00000025038	Efhc2	4933407D04Rik|mRib72-2	EF-hand domain (C-terminal) containing 2	protein-coding
unique_peak2-36852-3-12--2.11442280810037-2.15846853396659	chr3	89354922	89355352	+	0	NA	intron (NM_080466, intron 1 of 7)	intron (NM_080466, intron 1 of 7)	31051	NM_080466	140493	Mm.120250	NM_080466		Kcnn3	KCa2.3|SK3|SKCA3	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	protein-coding
unique_peak2-35852-3-8--1.58390809140159-1.39487600375387	chr18	75371379	75371758	+	0	NA	intron (NM_027727, intron 14 of 16)	B4A|SINE|B4	85403	NR_045394	100503117	Mm.250517	NR_045393		2010010A06Rik	5033420E22Rik	RIKEN cDNA 2010010A06 gene	ncRNA
common_peak2-31373-9-13--0.617741515653384-0.459837087125828	chr8	85036848	85037187	+	0	NA	Intergenic	L1Md_F|LINE|L1	-110532	NM_008357	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak1-19243-11-7-0.508693584251613-1.21681515183528	chr9	108990965	108991501	+	0	NA	intron (NM_025689, intron 1 of 3)	intron (NM_025689, intron 1 of 3)	6223	NM_025689	66658	Mm.128227	NM_025689	ENSMUSG00000025645	Ccdc51	5730568A12Rik|AI551049	coiled-coil domain containing 51	protein-coding
common_peak2-29550-19-20-0.0103699038829257-0.306326795069978	chr6	41249608	41250230	+	0	NA	Intergenic	RMER1A|Other|Other	-2352	NM_011646	22074	Mm.383263	NM_011646	ENSMUSG00000054106	Try4	0910001B19Rik|Td	trypsin 4	protein-coding
unique_peak2-39335-3-4--0.73591118484664-0.864171920961574	chr8	128391610	128392007	+	0	NA	intron (NM_175561, intron 8 of 33)	intron (NM_175561, intron 8 of 33)	30409	NM_175561	270109	Mm.145535	NM_175561	ENSMUSG00000060212	Pcnxl2	A830048P05|AU067631|E330039K12Rik|mKIAA0435	pecanex-like 2 (Drosophila)	protein-coding
common_peak2-29039-27-38--0.293856267967013-0.412842868820461	chr5	114772801	114773724	+	0	NA	intron (NM_001164573, intron 4 of 30)	intron (NM_001164573, intron 4 of 30)	8312	NM_001164573	231646	Mm.238285	NM_146163	ENSMUSG00000066952	Myo1h	4631401O15Rik	myosin 1H	protein-coding
unique_peak2-36624-4-11--1.6084230145744-1.68134727924692	chr3	88325554	88326179	+	0	NA	Intergenic	Intergenic	-10451	NM_001029890	72640	Mm.275154	NM_001029890	ENSMUSG00000074480	Mex3a	2700083E18Rik|Gm411|Rkhd4	mex3 homolog A (C. elegans)	protein-coding
unique_peak2-34473-9-10--0.269818212233077-1.05503135781948	chr14	31857493	31857966	+	0	NA	intron (NM_001081251, intron 9 of 32)	RSINE1|SINE|B4	25405	NM_001081251	66923	Mm.27913	NM_025847	ENSMUSG00000042323	Pbrm1	2610016F04Rik|AI507524|BAF180|Pb1	polybromo 1	protein-coding
unique_peak2-36650-3-14--2.3208736855678-2.58603100924543	chr3	10442537	10443286	+	0	NA	Intergenic	Intergenic	-2781	NM_001127191	74718	Mm.440548	NM_029068	ENSMUSG00000027534	Snx16	4930522N22Rik|AI117577|AI747675	sorting nexin 16	protein-coding
unique_peak2-36740-3-7--1.41398308995928-1.23214870625617	chr3	57847505	57847943	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	120005	NR_040538	67850	Mm.416968	NR_040538		1700007F19Rik	-	RIKEN cDNA 1700007F19 gene	ncRNA
common_peak1-9501-33-12-1.63089784438444-3.75499050687144	chr11	113059622	113061031	+	0	NA	intron (NR_015556, intron 1 of 2)	intron (NR_015556, intron 1 of 2)	2826	NR_015556	72386	Mm.266961	NR_015556	ENSMUSG00000087259	2610035D17Rik	-	RIKEN cDNA 2610035D17 gene	ncRNA
common_peak2-21681-11-13--0.298661337805991-0.337263207250336	chr11	103954011	103954433	+	0	NA	Intergenic	MTB-int|LTR|MaLR	-39974	NM_007762	12921	Mm.1892	NM_007762	ENSMUSG00000018634	Crhr1	CRFR1|Crhr	corticotropin releasing hormone receptor 1	protein-coding
common_peak2-24222-98-134-0.12495309637972-0.431674072781311	chr16	84834244	84835940	+	0	NA	promoter-TSS (NM_008065)	promoter-TSS (NM_008065)	-277	NM_008065	14390	Mm.18974	NM_008065	ENSMUSG00000008976	Gabpa	GABPalpha	GA repeat binding protein, alpha	protein-coding
common_peak1-18865-24-20-0.400892479988956-0.591915184368645	chr9	21615929	21616872	+	0	NA	intron (NM_177030, intron 38 of 49)	B4A|SINE|B4	-1956	NR_106051	102465657		NR_106051		Mir7083	mmu-mir-7083	microRNA mir-7083	ncRNA
unique_peak2-33406-2-7--1.91745425626332-1.45399745587252	chr11	55032048	55032487	+	0	NA	intron (NM_153139, intron 2 of 10)	intron (NM_153139, intron 2 of 10)	14425	NM_153139	215335	Mm.35732	NM_153139	ENSMUSG00000020261	Slc36a1	5830411H19Rik|AI839897|Pat1	solute carrier family 36 (proton/amino acid symporter), member 1	protein-coding
common_peak2-25457-25-23-0.27688740462395-0.451698068655807	chr19	4211450	4212654	+	0	NA	Intergenic	Intergenic	-2340	NM_019952	56708	Mm.347919	NM_019952		Clcf1	Bsf3|CLC	cardiotrophin-like cytokine factor 1	protein-coding
unique_peak2-36830-9-15--0.81038659359578-0.630231561310125	chr3	88531151	88531843	+	0	NA	intron (NR_028056, intron 5 of 5)	intron (NR_028056, intron 5 of 5)	10721	NM_001163310	19769	Mm.4009	NM_009069		Rit1	RIBB|ROC1|Rit	Ras-like without CAAX 1	protein-coding
common_peak2-20003-23-29--0.185123091099438-0.336580821310529	chr1	134455071	134456079	+	0	NA	Intergenic	Intergenic	-16058	NM_177129	21367	Mm.260861	NM_011531	ENSMUSG00000053024	Cntn2	D130012K04Rik|TAG-1|Tax	contactin 2	protein-coding
common_peak2-21910-11-19--0.813234510635749-0.769930178837768	chr12	8921445	8921871	+	0	NA	Intergenic	MLT2D|LTR|ERVL	-6455	NM_008640	17775	Mm.30071	NM_008640	ENSMUSG00000020585	Laptm4a	AA286466|LAPTM4|MTP|Mtrp|mKIAA0108	lysosomal-associated protein transmembrane 4A	protein-coding
common_peak2-27241-8-8--0.164702583494742-1.00793137938329	chr3	52104814	52105262	+	0	NA	intron (NM_019739, intron 1 of 2)	(CTGTG)n|Simple_repeat|Simple_repeat	32779	NM_019739	56458	Mm.29891	NM_019739	ENSMUSG00000044167	Foxo1	AI876417|Afxh|FKHR|Fkhr1|Foxo1a	forkhead box O1	protein-coding
common_peak1-10272-72-112--0.15159514954287-0.402537629804984	chr13	56702520	56703982	+	0	NA	Intergenic	Intergenic	-7713	NM_009369	21810	Mm.14455	NM_009369	ENSMUSG00000035493	Tgfbi	68kDa|AI181842|AI747162|Beta-ig|big-h3	transforming growth factor, beta induced	protein-coding
common_peak2-20997-74-89-0.224033480648933-0.587900541753207	chr11	23305868	23307432	+	0	NA	intron (NM_001190401, intron 33 of 79)	B1F1|SINE|Alu	91389	NM_001290655	268390	Mm.13148	NM_172391	ENSMUSG00000020288	Ahsa2	-	AHA1, activator of heat shock protein ATPase 2	protein-coding
unique_peak1-3412-9-4-0.867685311516858-1.36011389749466	chr19	5819371	5819948	+	0	NA	Intergenic	Intergenic	-16988	NR_002847	72289	Mm.298256	NR_002847	ENSMUSG00000092341	Malat1	2210401K01Rik|9430072K23Rik|AI647968|Neat2	metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)	ncRNA
unique_peak2-35054-7-11--0.785871670422967-1.21681515183528	chr16	10411755	10412253	+	0	NA	promoter-TSS (NM_011955)	promoter-TSS (NM_011955)	-27	NM_011955	26425	Mm.29037	NM_011955	ENSMUSG00000022503	Nubp1	-	nucleotide binding protein 1	protein-coding
common_peak2-20289-40-63--0.341024317248902-0.575830045570394	chr1	192137526	192138934	+	0	NA	Intergenic	Intergenic	-143671	NM_008937	19130	Mm.132579	NM_008937	ENSMUSG00000010175	Prox1	A230003G05Rik	prospero homeobox 1	protein-coding
common_peak2-26577-48-111--0.836427770822789-3.213985300919	chr2	104711509	104712889	+	0	NA	Intergenic	B1F|SINE|Alu	-14282	NM_177600	211936	Mm.416538	NM_177600	ENSMUSG00000045106	Ccdc73	2210415I11Rik|4931417A20|AV080665|BC095976	coiled-coil domain containing 73	protein-coding
common_peak2-27225-38-48--0.0432571848166781-0.301029995664001	chr3	51483450	51484951	+	0	NA	intron (NM_174995, intron 3 of 4)	URR1B|DNA|MER1_type	19085	NM_174995	211666	Mm.24679	NM_174995	ENSMUSG00000074604	Mgst2	GST2|MGST-II	microsomal glutathione S-transferase 2	protein-coding
common_peak2-30082-37-57--0.331987923641753-0.556612435105728	chr6	134670924	134671942	+	0	NA	intron (NM_001048054, intron 5 of 6)	intron (NM_001048054, intron 5 of 6)	71213	NM_130447	70686	Mm.491182	NM_130447	ENSMUSG00000030203	Dusp16	3830417M17Rik|AW558566|D6Ertd213e|MKP-7|MKP7|Mkpm	dual specificity phosphatase 16	protein-coding
common_peak1-13322-51-34-0.945640808657607-2.68589576607121	chr19	42659378	42661017	+	0	NA	intron (NM_177464, intron 6 of 6)	intron (NM_177464, intron 6 of 6)	27099	NM_001164311	67573	Mm.178767	NM_053083	ENSMUSG00000025185	Loxl4	4833426I20Rik|Loxc	lysyl oxidase-like 4	protein-coding
unique_peak1-6021-8-9--0.316705676939792-1.03275496310833	chr6	112401854	112402447	+	0	NA	Intergenic	ID_B1|SINE|B4	-7349	NM_007617	12391	Mm.3924	NM_007617	ENSMUSG00000062694	Cav3	AI385751|Cav-3|M-cav	caveolin 3	protein-coding
common_peak1-16080-24-24-0.149353712992992-0.367910579842133	chr5	63827095	63828249	+	0	NA	Intergenic	AT_rich|Low_complexity|Low_complexity	-212670	NM_177006	319807	Mm.319487	NM_028470	ENSMUSG00000090061	Nwd2	3110047P20Rik|B830017A01Rik|Hn1-ps2|mKIAA1239	NACHT and WD repeat domain containing 2	protein-coding
common_peak1-17861-11-9-0.186765489364251-0.344532117358383	chr7	113419793	113420310	+	0	NA	Intergenic	L1VL4|LINE|L1	47991	NR_030720	668128	Mm.484022	NR_030720		Gm8989	EG668128|Gm21911	very large inducible GTPase 1 pseudogene	pseudo
unique_peak2-36996-1-7--2.62705701021674-1.80617997398389	chr3	121634249	121634556	+	0	NA	Intergenic	Intergenic	-21842	NM_172525	214137	Mm.229287	NM_172525	ENSMUSG00000039831	Arhgap29	6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1	Rho GTPase activating protein 29	protein-coding
unique_peak1-124-9-1-2.18961340640422-2.31132995230379	chr1	64000644	64001159	+	0	NA	Intergenic	Intergenic	-10400	NR_027824	433315	Mm.342696	NM_001013800	ENSMUSG00000044689	Gm13749	OTTMUSG00000013918	predicted gene 13749	ncRNA
common_peak1-15167-12-9-0.326847890200276-0.459837087125828	chr3	152113818	152114499	+	0	NA	intron (NM_001287139, intron 9 of 13)	intron (NM_001287139, intron 9 of 13)	54510	NM_001287139	108946	Mm.379292	NM_198416	ENSMUSG00000039068	Zzz3	3110065C23Rik|6430567E01Rik|AA408566|AI481057|AW556059|R75514	zinc finger, ZZ domain containing 3	protein-coding
unique_peak2-35403-5-10--1.16381195464315-1.33892459842472	chr17	32506469	32507050	+	0	NA	intron (NM_011717, intron 2 of 8)	ETnERV-int|LTR|ERVK	18003	NM_212438	22404	Mm.274948	NM_011717	ENSMUSG00000024050	Wiz	-	widely-interspaced zinc finger motifs	protein-coding
common_peak2-27554-19-17-0.232762325219374-0.392630012299441	chr3	96556982	96557772	+	0	NA	intron (NM_026406, intron 1 of 8)	intron (NM_026406, intron 1 of 8)	25843	NM_026406	67845	Mm.386792	NM_026406	ENSMUSG00000028098	Rnf115	2610028E05Rik|AU042696|Zfp364	ring finger protein 115	protein-coding
common_peak1-8667-27-35--0.178379050547076-0.330208782692001	chr10	128459129	128460053	+	0	NA	Intergenic	Intergenic	11248	NM_146862	258861	Mm.377724	NM_146862	ENSMUSG00000063374	Olfr763	MOR269-2	olfactory receptor 763	protein-coding
common_peak2-25877-39-47-0.0307987461979975-0.310078451983505	chr19	44106748	44107694	+	0	NA	Intergenic	Intergenic	-3484	NM_001167905	226143	Mm.329866	NM_001001446	ENSMUSG00000025197	Cyp2c44	AW107714|BC034834|b2b386Clo	cytochrome P450, family 2, subfamily c, polypeptide 44	protein-coding
unique_peak2-39961-5-7--0.704380336005853-1.01466476204226	chrX	141151213	141151584	+	0	NA	intron (NM_001033795, intron 2 of 6)	MLT1J|LTR|MaLR	27948	NM_001033795	619287	Mm.387961	NM_001033795	ENSMUSG00000071679	Zcchc16	C230031A03Rik|Mar4	zinc finger, CCHC domain containing 16	protein-coding
unique_peak2-37701-1-8--2.79698201165906-2.05605744720049	chr5	103366852	103367161	+	0	NA	intron (NM_001081567, intron 11 of 13)	L1Md_A|LINE|L1	169177	NM_001286468	231532	Mm.440191	NM_029270	ENSMUSG00000057315	Arhgap24	0610025G21Rik	Rho GTPase activating protein 24	protein-coding
common_peak2-28942-24-19-0.471281807880354-0.677583764578261	chr5	99241533	99242219	+	0	NA	Intergenic	Intergenic	-41582	NM_173404	110075	Mm.209571	NM_173404	ENSMUSG00000029335	Bmp3	9130206H07|9530029I04Rik	bone morphogenetic protein 3	protein-coding
common_peak1-7566-10-2-1.77145284428761-2.09384600808989	chr1	43167330	43167829	+	0	NA	intron (NM_133818, intron 2 of 3)	ORR1D2|LTR|MaLR	12024	NM_133818	98404	Mm.28817	NM_133818	ENSMUSG00000010290	AI597479	-	expressed sequence AI597479	protein-coding
unique_peak1-1724-19-6-1.59533240460408-2.21753093801298	chr13	98026805	98027881	+	0	NA	Intergenic	Intergenic	16283	NM_007930	13803	Mm.241073	NM_007930	ENSMUSG00000041773	Enc1	Nrpb|PIG10	ectodermal-neural cortex 1	protein-coding
common_peak2-31323-19-19-0.0807592317743238-0.322753776620787	chr8	80879857	80880556	+	0	NA	intron (NM_183096, intron 12 of 13)	L2|LINE|L2	80345	NM_138944	18997	Mm.234261	NM_138944	ENSMUSG00000031688	Pou4f2	Brn-3.2|Brn-3b|Brn3b|Pou4f-rs1|mBrn3-3R	POU domain, class 4, transcription factor 2	protein-coding
common_peak1-9431-10-8-0.186490343566457-1.078512453669	chr11	101783830	101784418	+	0	NA	Intergenic	RSINE1|SINE|B4	-28456	NM_010791	17285	Mm.3404	NM_010791	ENSMUSG00000001493	Meox1	AI385561|D330041M02Rik|Mox-1|Mox1	mesenchyme homeobox 1	protein-coding
common_peak2-27417-23-22-0.198205548452068-0.373496418836697	chr3	88592439	88593351	+	0	NA	intron (NR_028359, intron 3 of 17)	B1F|SINE|Alu	11916	NR_028359	100302730	Mm.482358	NR_028359		5830417I10Rik	3632445O20Rik|AA387005	gon-4-like pseudogene	pseudo
common_peak2-30225-6-7--0.434601889619698-0.97990265578305	chr7	3289810	3290219	+	0	NA	promoter-TSS (NM_001093765)	promoter-TSS (NM_001093765)	-542	NM_016969	50918	Mm.29874	NM_016969	ENSMUSG00000068566	Myadm	D7Wsu62e	myeloid-associated differentiation marker	protein-coding
unique_peak2-38891-2-6--1.72480917832092-1.26211192963361	chr8	8488437	8488816	+	0	NA	Intergenic	Intergenic	172147	NM_010111	13642	Mm.209813	NM_010111	ENSMUSG00000001300	Efnb2	ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1	ephrin B2	protein-coding
unique_peak2-35181-7-8--0.370834171144123-1.00793137938329	chr16	50363887	50364375	+	0	NA	intron (NM_027444, intron 2 of 16)	intron (NM_027444, intron 2 of 16)	68371	NM_027444	70508	Mm.28940	NM_027444	ENSMUSG00000022641	Bbx	5530401J07Rik|5730403O13Rik	bobby sox homolog (Drosophila)	protein-coding
unique_peak2-34084-3-8--1.58390809140159-1.39487600375387	chr13	8766368	8766951	+	0	NA	non-coding (NR_110345, exon 11 of 11)	non-coding (NR_110345, exon 11 of 11)	103631	NM_001039389	207615	Mm.284654	NM_172445	ENSMUSG00000021147	Wdr37	-	WD repeat domain 37	protein-coding
common_peak1-13460-100-94-0.666916166479842-3.20722554366912	chr19	60225910	60227137	+	0	NA	intron (NR_026942, intron 1 of 4)	intron (NR_026942, intron 1 of 4)	5945	NR_026942	107376	Mm.245813	NR_026942	ENSMUSG00000053117	E330013P04Rik	9930018I18Rik|AW492152	RIKEN cDNA E330013P04 gene	ncRNA
common_peak1-16922-31-43--0.234192947824174-0.398838069828027	chr6	82652557	82653682	+	0	NA	Intergenic	B4A|SINE|B4	-50260	NM_025882	66979	Mm.195753	NM_025882	ENSMUSG00000030042	Pole4	2400007P05Rik|5830430F06Rik	polymerase (DNA-directed), epsilon 4 (p12 subunit)	protein-coding
common_peak1-18362-16-25--0.58217607587303-0.633951497070961	chr8	70233843	70234731	+	0	NA	intron (NM_177698, intron 14 of 14)	B2_Mm2|SINE|B2	107907	NM_027626	234353	Mm.32525	NM_027626	ENSMUSG00000030465	Psd3	4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D	pleckstrin and Sec7 domain containing 3	protein-coding
common_peak2-25902-17-13-0.410941416147434-0.546772548767014	chr19	45784004	45784682	+	0	NA	Intergenic	Intergenic	20705	NR_045307	71232	Mm.50944	NR_045307		4933429K18Rik	-	RIKEN cDNA 4933429K18 gene	ncRNA
unique_peak1-6026-18-7-1.31291915122835-1.71830443967823	chr6	113434299	113435217	+	0	NA	intron (NM_133930, intron 2 of 9)	intron (NM_133930, intron 2 of 9)	1195	NM_133930	171508	Mm.41593	NM_133930	ENSMUSG00000030284	Creld1	AI843811	cysteine-rich with EGF-like domains 1	protein-coding
common_peak1-11229-8-1-2.00522241794757-2.05605744720049	chr15	79377308	79377792	+	0	NA	promoter-TSS (NM_199079)	promoter-TSS (NM_199079)	-379	NM_199080	67040	Mm.29644	NM_152806	ENSMUSG00000055065	Ddx17	2610007K22Rik|A430025E01Rik|AI047725|C80929|Gm926|p72	DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	protein-coding
unique_peak2-37381-4-10--1.48289213249054-1.5150158574804	chr4	139130375	139130773	+	0	NA	promoter-TSS (NM_001205173)	promoter-TSS (NM_001205173)	-61	NM_001205173	212632	Mm.30464	NM_183148	ENSMUSG00000041025	Iffo2	C79267	intermediate filament family orphan 2	protein-coding
unique_peak2-36084-10-22--1.16714661104824-1.30248952876293	chr19	55991397	55992308	+	0	NA	exon (NM_001142919, exon 8 of 14)	exon (NM_001142919, exon 8 of 14)	22041	NM_001142924	21416	Mm.139815	NM_009333	ENSMUSG00000024985	Tcf7l2	TCF4B|TCF4E|Tcf-4|Tcf4|mTcf-4B|mTcf-4E	transcription factor 7 like 2, T cell specific, HMG box	protein-coding
common_peak1-8893-18-3-2.31291915122835-3.35694334496952	chr11	49044310	49045405	+	0	NA	Intergenic	Intergenic	-12836	NM_010794	17308	Mm.196933	NM_010794	ENSMUSG00000020346	Mgat1	Mgat-1	mannoside acetylglucosaminyltransferase 1	protein-coding
common_peak2-31640-11-10-0.0492619656143161-0.31137425193576	chr8	123982230	123982795	+	0	NA	Intergenic	Intergenic	83342	NM_029597	76405	Mm.165697	NM_029597	ENSMUSG00000031809	1700018B08Rik	1700084O22Rik	RIKEN cDNA 1700018B08 gene	protein-coding
common_peak1-18275-24-30--0.160986407619158-0.316008636696545	chr8	36094440	36095445	+	0	NA	Intergenic	IAP-d-int|LTR|ERVK	-66198	NM_175091	21951	Mm.88364	NM_175091	ENSMUSG00000031529	Tnks	4930554K12Rik|AI662855|ARTD5|C86528|D130072O21Rik|TANK1|mTNKS1	tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase	protein-coding
common_peak2-28583-32-36-0.0696386535907099-0.327094617740873	chr5	14025186	14026372	+	0	NA	5' UTR (NM_011348, exon 1 of 17)	5' UTR (NM_011348, exon 1 of 17)	503	NM_011348	20349	Mm.134093	NM_011348	ENSMUSG00000063531	Sema3e	6430702L12|AA408817|Semah|mKIAA0331	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E	protein-coding
common_peak1-14269-29-17-0.942365079172799-1.68242911687175	chr2	156277675	156278705	+	0	NA	intron (NM_001291121, intron 2 of 21)	intron (NM_001291121, intron 2 of 21)	-23080	NM_001006664	13821	Mm.20852	NM_013510	ENSMUSG00000027624	Epb4.1l1	4.1N|Epb41l1|NBL1|mKIAA0338	erythrocyte protein band 4.1-like 1	protein-coding
common_peak2-25337-18-23--0.272043349492805-0.34651636097721	chr18	76929983	76930690	+	0	NA	Intergenic	Intergenic	-164808	NM_001109743	664805	Mm.329543	NM_001109743	ENSMUSG00000091519	Skor2	Corl2|EG664805|Fussel18|Gm7348	SKI family transcriptional corepressor 2	protein-coding
unique_peak1-787-10-2-1.77145284428761-2.09384600808989	chr11	58801750	58802208	+	0	NA	intron (NM_001290988, intron 4 of 6)	intron (NM_001290988, intron 4 of 6)	10384	NM_053168	94091	Mm.248049	NM_053168	ENSMUSG00000020455	Trim11	-	tripartite motif-containing 11	protein-coding
common_peak1-17464-10-11--0.228547155712387-0.31137425193576	chr7	19507814	19508347	+	0	NA	Intergenic	Intergenic	-3157	NM_001029877	384569	Mm.262724	NM_001029877	ENSMUSG00000030411	Nova2	Gm1424	neuro-oncological ventral antigen 2	protein-coding
common_peak2-23870-82-77-0.607860925443486-2.27059340392728	chr15	102671720	102673821	+	0	NA	Intergenic	MTD|LTR|MaLR	-78792	NM_010464	15422	Mm.207062	NM_010464	ENSMUSG00000001655	Hoxc13	-	homeobox C13	protein-coding
unique_peak2-39250-9-10--0.269818212233077-1.05503135781948	chr8	117074757	117075322	+	0	NA	intron (NM_019573, intron 5 of 8)	intron (NM_019573, intron 5 of 8)	111487	NM_019573	80707	Mm.440420	NM_019573	ENSMUSG00000004637	Wwox	5330426P09Rik|9030416C10Rik|WOX1	WW domain-containing oxidoreductase	protein-coding
unique_peak1-6088-23-8-1.55184250306677-2.47979361197949	chr6	124732556	124733623	+	0	NA	Intergenic	Lx9|LINE|L1	-3353	NM_013588	16977	Mm.3207	NM_013588	ENSMUSG00000030125	Lrrc23	4921537K05Rik|B7|Lrpb7	leucine rich repeat containing 23	protein-coding
unique_peak1-1624-9-3-1.18961340640422-1.57096726280955	chr13	43193260	43193783	+	0	NA	intron (NM_001005740, intron 8 of 12)	intron (NM_001005740, intron 8 of 12)	-24687	NM_001005748	218194	Mm.160124	NM_198419	ENSMUSG00000054728	Phactr1	9630030F18Rik|Rpel1	phosphatase and actin regulator 1	protein-coding
common_peak1-15956-9-8-0.0196884049619079-1.03275496310833	chr5	30907222	30907780	+	0	NA	intron (NM_010608, intron 1 of 1)	MIRc|SINE|MIR	-16509	NR_040427	100502829	Mm.39944	NR_040427		Gm9899	ENSMUSG00000053214	predicted gene 9899	ncRNA
common_peak2-27542-35-70--0.718376861042178-1.71556178298764	chr3	96171716	96172868	+	0	NA	Intergenic	RLTR6-int|LTR|ERV1	46464	NR_001579	21748		NR_001579	ENSMUSG00000064796	Terc	mTER|mTR	telomerase RNA component	ncRNA
common_peak2-19983-34-32-0.337674407642813-0.595371917655143	chr1	133694328	133695736	+	0	NA	intron (NM_178079, intron 1 of 12)	intron (NM_178079, intron 1 of 12)	1060	NM_178079	212933	Mm.23844	NM_178079	ENSMUSG00000042251	Pm20d1	4732466D17Rik|AI098026	peptidase M20 domain containing 1	protein-coding
common_peak2-28009-25-28-0.00386891021753399-0.304839791830758	chr4	46389127	46389728	+	0	NA	TTS (NM_029086)	TTS (NM_029086)	12868	NM_029086	74753	Mm.45973	NM_029086	ENSMUSG00000028331	5830415F09Rik	AV014846|Nap1	RIKEN cDNA 5830415F09 gene	protein-coding
unique_peak1-5794-19-6-1.59533240460408-2.21753093801298	chr6	59425984	59426776	+	0	NA	Intergenic	L1Md_F|LINE|L1	-50096	NM_183183	243385	Mm.138080	NM_183183	ENSMUSG00000045441	Gprin3	C030038J10Rik|C730021L23	GPRIN family member 3	protein-coding
common_peak1-10326-9-2-1.60465090568306-1.87199725847353	chr13	73728372	73728911	+	0	NA	Intergenic	ORR1A2|LTR|MaLR	-12809	NM_146047	218335	Mm.30099	NM_146047	ENSMUSG00000021610	Clptm1l	C130052I12Rik|Crr9	CLPTM1-like	protein-coding
unique_peak2-35264-6-25--2.13504160776079-3.01815507148775	chr17	46890698	46891373	+	0	NA	Intergenic	Intergenic	-1874	NM_028065	72029	Mm.240325	NM_028065	ENSMUSG00000023973	Cnpy3	1600025D17Rik|2410050O22Rik|AI413153|CAG4A|ERDA5|PRAT4A|Tnrc5	canopy 3 homolog (zebrafish)	protein-coding
unique_peak2-37482-7-15--1.20090916970181-0.947446088118041	chr5	4497375	4497957	+	0	NA	Intergenic	(TC)n|Simple_repeat|Simple_repeat	260550	NM_021457	14362	Mm.246003	NM_021457	ENSMUSG00000044674	Fzd1	AW227548|FZ-1|Fz1	frizzled homolog 1 (Drosophila)	protein-coding
common_peak1-10185-13-11-0.193509529916613-0.379391706698377	chr13	41662905	41663519	+	0	NA	Intergenic	RMER4B|LTR|ERVK	-38373	NM_001163572	621976	Mm.259830	NM_001163572	ENSMUSG00000087370	Tmem170b	EG621976	transmembrane protein 170B	protein-coding
common_peak2-23797-13-8-0.608547029195456-0.660903317613904	chr15	99835778	99836069	+	0	NA	intron (NM_001284521, intron 13 of 15)	AT_rich|Low_complexity|Low_complexity	-32205	NR_028124	70281	Mm.484037	NR_028124		2310068J16Rik	-	RIKEN cDNA 2310068J16 gene	ncRNA
common_peak1-8391-16-6-1.31090872021046-1.49151883326344	chr10	64836619	64837361	+	0	NA	Intergenic	Intergenic	749822	NR_038039	69433	Mm.23366	NR_038039		1700023F02Rik	AV205046	RIKEN cDNA 1700023F02 gene	ncRNA
common_peak2-26628-14-13-0.0918612383000403-0.332077462497413	chr2	119046807	119047482	+	0	NA	intron (NM_028104, intron 1 of 3)	B1_Mur1|SINE|Alu	8457	NM_028104	72112	Mm.46317	NM_028104	ENSMUSG00000027317	Ppp1r14d	2010107K19Rik|GBPI-1|Ppp1r14	protein phosphatase 1, regulatory (inhibitor) subunit 14D	protein-coding
common_peak1-17278-118-132-0.468510247621385-2.1676288709933	chr6	135250533	135253630	+	0	NA	Intergenic	Intergenic	8321	NM_029595	76400	Mm.293018	NM_029595		Pbp2	1700023A18Rik|AI326308|Pebp-2|Pebp2	phosphatidylethanolamine binding protein 2	protein-coding
common_peak1-16935-17-17-0.0483713367627256-0.325169893479371	chr6	83124942	83125742	+	0	NA	intron (NM_001198866, intron 1 of 31)	B4A|SINE|B4	-4241	NM_007835	13191	Mm.6919	NM_007835	ENSMUSG00000031865	Dctn1	AL022633|Glued|p150|p150<glued>	dynactin 1	protein-coding
common_peak2-27384-5-7--0.704380336005853-1.01466476204226	chr3	87509198	87509603	+	0	NA	intron (NM_001003912, intron 13 of 39)	Lx|LINE|L1	43145	NM_028971	74485	Mm.474494	NM_028971	ENSMUSG00000023084	Lrrc71	4933430H15Rik	leucine rich repeat containing 71	protein-coding
unique_peak1-1004-10-3-1.35641534500877-1.75805390616669	chr11	72504013	72504602	+	0	NA	intron (NM_009671, intron 1 of 24)	intron (NM_009671, intron 1 of 24)	803	NM_009671	11736	Mm.10313	NM_009671	ENSMUSG00000020790	Ankfy1	Ankhzn|ZFYVE14|mKIAA1255	ankyrin repeat and FYVE domain containing 1	protein-coding
unique_peak2-38063-32-81--1.07845998539842-3.56168615283088	chr6	47685069	47686519	+	0	NA	Intergenic	Intergenic	8436	NR_002841	19799		NR_002841		Rn4.5s	-	4.5S RNA	rRNA
common_peak2-21758-30-31-0.169675409491873-0.382130460680153	chr11	116077220	116078361	+	0	NA	non-coding (NR_004853, exon 2 of 7)	non-coding (NR_004853, exon 2 of 7)	474	NR_004853	69681	Mm.33677	NR_004853	ENSMUSG00000092300	Cdk3-ps	2310050O10Rik|Cdk3	cyclin-dependent kinase 3, pseudogene	pseudo
common_peak1-12527-46-31-0.897995943248802-2.34328043174784	chr18	68057768	68059760	+	0	NA	Intergenic	MTD|LTR|MaLR	-34147	NM_172631	52662	Mm.440183	NM_172631	ENSMUSG00000024544	Ldlrad4	8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik	low density lipoprotein receptor class A domain containing 4	protein-coding
common_peak2-20225-20-21-0.0286431659538957-0.306080386793804	chr1	180851060	180851712	+	0	NA	intron (NM_001161665, intron 12 of 14)	B1_Mur4|SINE|Alu	392130	NM_001161665	269152	Mm.129727	NM_177724	ENSMUSG00000026494	Kif26b	4832420M10|BC056349|D230039L06Rik	kinesin family member 26B	protein-coding
unique_peak2-36180-11-9-0.186765489364251-0.344532117358383	chr2	30078521	30078969	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	14406	NR_028299	67350	Mm.402683	NR_028299		1700084E18Rik	-	RIKEN cDNA 1700084E18 gene	ncRNA
common_peak2-20564-5-10--1.16381195464315-1.33892459842472	chr10	75516871	75517273	+	0	NA	Intergenic	ETnERV2-int|LTR|ERVK	21715	NM_177475	64453	Mm.80609	NM_177475	ENSMUSG00000049764	Zfp280b	D10Jhu82e|Suhw2	zinc finger protein 280B	protein-coding
unique_peak1-170-10-1-2.35641534500877-2.57096726280955	chr1	74068445	74068952	+	0	NA	intron (NM_001289895, intron 3 of 32)	intron (NM_001289895, intron 3 of 32)	102323	NM_027884	21961	Mm.309975	NM_027884	ENSMUSG00000055322	Tns1	1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns	tensin 1	protein-coding
common_peak2-31580-30-41--0.222642013286888-0.37158197664092	chr8	120100819	120102006	+	0	NA	intron (NM_172285, intron 9 of 32)	intron (NM_172285, intron 9 of 32)	79221	NM_172285	234779	Mm.192699	NM_172285	ENSMUSG00000034330	Plcg2	PLCgamma2|Plcg-2	phospholipase C, gamma 2	protein-coding
unique_peak2-37324-6-13--1.2419568116773-1.58711810488664	chr4	129188906	129189637	+	0	NA	Intergenic	Intergenic	-1554	NM_010807	17357	Mm.424974	NM_010807	ENSMUSG00000047945	Marcksl1	AL022768|AW215397|AW536807|D4Bc1|F52|MacMARCKS|Macs2|Macs3|Mlp|Mrp	MARCKS-like 1	protein-coding
common_peak1-10847-30-51--0.530764308649219-0.865433649227648	chr14	118937726	118938763	+	0	NA	intron (NM_001163675, intron 20 of 30)	MLT2C1|LTR|ERVL	53450	NR_105815	102465208		NR_105815		Mir6391	mmu-mir-6391	microRNA mir-6391	ncRNA
common_peak1-10268-40-28-0.800994687623526-1.77636329975051	chr13	55992547	55993536	+	0	NA	Intergenic	Intergenic	-60255	NM_011097	18740	Mm.135195	NM_011097	ENSMUSG00000021506	Pitx1	Bft|P-OTX|Potx|Ptx1	paired-like homeodomain transcription factor 1	protein-coding
common_peak2-27491-42-43-0.282897709229887-0.572487971606918	chr3	94782971	94784022	+	0	NA	intron (NM_001293716, intron 1 of 9)	intron (NM_001293716, intron 1 of 9)	4843	NM_001293716	107650	Mm.217222	NM_175356	ENSMUSG00000038861	Pi4kb	ESTM41|PI4K-beta|PI4Kbeta|Pik4cb	phosphatidylinositol 4-kinase, catalytic, beta polypeptide	protein-coding
common_peak2-26591-61-112--0.437429632665848-1.2410301407237	chr2	109890334	109891633	+	0	NA	promoter-TSS (NR_040508)	promoter-TSS (NR_040508)	-347	NR_040508	75517	Mm.363927	NR_040508	ENSMUSG00000086186	Ccdc34os	1700024P03Rik	coiled-coil domain containing 34, opposite strand	ncRNA
common_peak1-10994-15-19--0.309763344331706-0.356936432242222	chr15	36609363	36610061	+	0	NA	Intergenic	Intergenic	-70984	NM_008774	18458	Mm.371570	NM_008774	ENSMUSG00000022283	Pabpc1	PABP|Pabp1|PabpI|Pabpl1|ePAB	poly(A) binding protein, cytoplasmic 1	protein-coding
unique_peak1-4696-15-9-0.690236655668294-0.732381977911291	chr3	98030489	98031360	+	0	NA	intron (NM_026328, intron 2 of 5)	intron (NM_026328, intron 2 of 5)	4845	NM_026328	67709	Mm.46306	NM_026328	ENSMUSG00000027876	Reg4	2010002L15Rik|GISP|RELP	regenerating islet-derived family, member 4	protein-coding
common_peak2-29041-10-9-0.0344872501214071-1.05503135781948	chr5	114813498	114813943	+	0	NA	3' UTR (NM_001164573, exon 31 of 31)	3' UTR (NM_001164573, exon 31 of 31)	16794	NM_026145	330171	Mm.238285	NM_026145	ENSMUSG00000001098	Kctd10	AW536343|C87062|mBACURD3	potassium channel tetramerisation domain containing 10	protein-coding
unique_peak2-38066-4-6--0.830815435910851-0.989110657569874	chr6	47879058	47879459	+	0	NA	intron (NM_001145881, intron 4 of 4)	intron (NM_001145881, intron 4 of 4)	8691	NM_001145881	232784	Mm.196782	NM_145576	ENSMUSG00000052763	Zfp212	Znf212|mKIAA3011	Zinc finger protein 212	protein-coding
common_peak1-19502-21-53--1.18539823689723-2.7322447134298	chrX	163958243	163958930	+	0	NA	intron (NM_001290427, intron 6 of 17)	Lx2B|LINE|L1	-137955	NM_026662	110639	Mm.272955	NM_026662	ENSMUSG00000025742	Prps2	2610101M19Rik|AA589463|AI464149|Prps-2	phosphoribosyl pyrophosphate synthetase 2	protein-coding
common_peak2-28565-11-10-0.0492619656143161-0.31137425193576	chr5	5688604	5688986	+	0	NA	intron (NM_028734, intron 1 of 5)	intron (NM_028734, intron 1 of 5)	5294	NM_001285471	74051	Mm.274956	NM_028734	ENSMUSG00000015653	Steap2	4921538B17Rik|AI930049|AW045895|IPCA-1|IPCA1|PCANAP1|STAMP1|STMP	six transmembrane epithelial antigen of prostate 2	protein-coding
common_peak2-29964-12-8-0.478850983645327-0.562038191119709	chr6	119175217	119175639	+	0	NA	Intergenic	Intergenic	-11116	NM_001033382	319734	Mm.440773	NM_001033382	ENSMUSG00000041460	Cacna2d4	5730412N02Rik|BE686333	calcium channel, voltage-dependent, alpha 2/delta subunit 4	protein-coding
common_peak2-31250-9-8-0.0196884049619079-1.03275496310833	chr8	70635591	70636080	+	0	NA	Intergenic	Intergenic	-137362	NM_177698	234353	Mm.32525	NM_027626	ENSMUSG00000030465	Psd3	4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D	pleckstrin and Sec7 domain containing 3	protein-coding
common_peak1-14357-10-11--0.228547155712387-0.31137425193576	chr2	166905484	166905941	+	0	NA	Intergenic	Intergenic	14919	NR_028540	100217443		NR_028540		Snord12	MBII-99	small nucleolar RNA, C/D box 12	snoRNA
common_peak1-17386-42-33-0.654866486616845-1.41268768702114	chr7	135609897	135610829	+	0	NA	Intergenic	MT2B|LTR|ERVL	-5336	NM_009383	21843	Mm.242072	NM_009383	ENSMUSG00000030846	Tial1	5330433G13Rik|AL033329|TIAR|mTIAR	Tia1 cytotoxic granule-associated RNA binding protein-like 1	protein-coding
unique_peak2-37341-7-13--1.00826409175941-0.697979855752659	chr4	132274198	132274872	+	0	NA	intron (NM_210071, intron 15 of 16)	intron (NM_210071, intron 15 of 16)	13926	NM_201368	381560	Mm.44558	NM_201368	ENSMUSG00000037752	Xkr8	4931440N07Rik|AI597014|Gm1031|XRG8|mXkr8	X Kell blood group precursor related family member 8 homolog	protein-coding
unique_peak1-5900-8-5-0.420259917226415-1.10484139239135	chr6	87509916	87510395	+	0	NA	Intergenic	RLTR15|LTR|ERVK	-26902	NM_001286610	232201	Mm.119564	NM_175476		Arhgap25	A130039I20Rik	Rho GTPase activating protein 25	protein-coding
unique_peak2-33019-8-22--1.51833953810944-1.77631109801764	chr10	68008616	68009496	+	0	NA	Intergenic	MTE-int|LTR|MaLR	-4433	NM_028491	73287	Mm.141830	NM_028491	ENSMUSG00000019945	1700040L02Rik	-	RIKEN cDNA 1700040L02 gene	protein-coding
common_peak2-25928-11-8-0.338768582809301-1.14218153353838	chr19	46507086	46507474	+	0	NA	intron (NM_001025391, intron 3 of 11)	intron (NM_001025391, intron 3 of 11)	35894	NM_015752	24069	Mm.41210	NM_015752	ENSMUSG00000025231	Sufu	Su(fu)	suppressor of fused homolog (Drosophila)	protein-coding
common_peak2-26000-23-8-1.55184250306677-2.47979361197949	chr19	55462714	55463287	+	0	NA	intron (NM_001293685, intron 5 of 8)	intron (NM_001293685, intron 5 of 8)	72453	NM_001293686	53611	Mm.258637	NM_016862	ENSMUSG00000024983	Vti1a	1110014F16Rik|1110018K19Rik|4921537J05Rik|MVti1|MVti1a|Vti1|Vti1-rp2	vesicle transport through interaction with t-SNAREs 1A	protein-coding
unique_peak2-35457-3-7--1.41398308995928-1.23214870625617	chr17	36003819	36004214	+	0	NA	5' UTR (NM_175242, exon 1 of 3)	5' UTR (NM_175242, exon 1 of 3)	456	NM_175242	76448	Mm.359982	NM_175242	ENSMUSG00000034595	Ppp1r18	2310014H01Rik|AA407849|AI450394	protein phosphatase 1, regulatory subunit 18	protein-coding
common_peak1-19147-8-7-0.00522241794757061-1.00793137938329	chr9	86721487	86721905	+	0	NA	intron (NM_001277982, intron 7 of 29)	intron (NM_001277982, intron 7 of 29)	53536	NM_001277982	20616	Mm.281651	NM_013669	ENSMUSG00000033419	Snap91	91kDa|AP180|F1-20|mKIAA0656	synaptosomal-associated protein 91	protein-coding
common_peak1-11549-7-14--1.10779976531033-0.817533494790411	chr16	8828941	8829450	+	0	NA	promoter-TSS (NM_001081400)	promoter-TSS (NM_001081400)	-998	NM_001081400	69053	Mm.390868	NM_001081400	ENSMUSG00000022507	1810013L24Rik	1110017P05Rik|3010002C02Rik|AA792997|AW124177|Gm19906|R74903	RIKEN cDNA 1810013L24 gene	protein-coding
unique_peak1-918-7-0-2.79909083029819-2.40823996531185	chr11	49262081	49262546	+	0	NA	Intergenic	ETnERV2-int|LTR|ERVK	4958	NM_146467	258459	Mm.377513	NM_146467	ENSMUSG00000047702	Olfr1388	MOR256-28	olfactory receptor 1388	protein-coding
common_peak1-9465-53-24-1.4971168226412-5.57954964143455	chr11	104288502	104290445	+	0	NA	intron (NM_001081045, intron 1 of 13)	PB1D9|SINE|Alu	14132	NM_001081045	76719	Mm.136418	NM_001081045	ENSMUSG00000018412	Kansl1	1700081L11Rik|9430041J06Rik|mKIAA1267	KAT8 regulatory NSL complex subunit 1	protein-coding
common_peak1-7587-89-56-1.20207674066126-7.02032800575544	chr1	54604080	54606758	+	0	NA	intron (NM_001163314, intron 2 of 26)	intron (NM_001163314, intron 2 of 26)	9109	NM_001163314	241062	Mm.103539	NM_175508	ENSMUSG00000073678	Pgap1	5033403E17Rik|9030223K07Rik|A530084K22|D230012E17Rik|oto	post-GPI attachment to proteins 1	protein-coding
common_peak2-22593-57-30-1.31183672969205-4.94059879926354	chr13	72631109	72632129	+	0	NA	Intergenic	L1_Mus3|LINE|L1	134393	NR_030701	328287	Mm.235072	NR_030701		Gm20554	D430050G20	predicted gene, 20554	ncRNA
unique_peak1-1235-8-2-1.42025991722641-1.65811743852845	chr11	113087323	113087784	+	0	NA	Intergenic	Intergenic	-16570	NR_040276	319871	Mm.383743	NR_040276	ENSMUSG00000085421	4732490B19Rik	-	RIKEN cDNA 4732490B19 gene	ncRNA
unique_peak2-32538-5-7--0.704380336005853-1.01466476204226	chr1	67038383	67038809	+	0	NA	Intergenic	RLTR11B|LTR|ERVK	46812	NM_001190984	14768	Mm.20522	NM_021295	ENSMUSG00000026000	Lancl1	AW124738|Gpr69|Gpr69a|p40	LanC (bacterial lantibiotic synthetase component C)-like 1	protein-coding
unique_peak2-32584-8-6-0.197867495889966-1.03789460276074	chr1	89123527	89123972	+	0	NA	intron (NM_023314, intron 6 of 6)	intron (NM_023314, intron 6 of 6)	13235	NM_001039169	26987	Mm.227183	NM_023314	ENSMUSG00000026254	Eif4e2	2700069E09Rik|AI036339|AV129531|D0H0S6743E|Eif4el3	eukaryotic translation initiation factor 4E member 2	protein-coding
common_peak2-32080-15-9-0.690236655668294-0.732381977911291	chr9	96381570	96381951	+	0	NA	Intergenic	Intergenic	-2746	NM_011279	19823	Mm.28235	NM_011279	ENSMUSG00000051234	Rnf7	Rbx2|SAG	ring finger protein 7	protein-coding
unique_peak2-39281-1-5--2.2120195109379-1.32905871926422	chr8	122276092	122276477	+	0	NA	intron (NM_026922, intron 21 of 26)	B4|SINE|B4	26032	NM_028883	74347	Mm.358759	NM_028883	ENSMUSG00000034105	Tldc1	4632415K11Rik|Kiaa1609	TBC/LysM associated domain containing 1	protein-coding
common_peak2-30898-8-7-0.00522241794757061-1.00793137938329	chr7	142436986	142437437	+	0	NA	Intergenic	MER45A|DNA|Tip100	-23091	NM_001163611	100043254	Mm.192092	NM_001163611	ENSMUSG00000073804	Nps	ENSMUSG00000073804	neuropeptide S	protein-coding
common_peak2-28438-33-45--0.192224393531484-0.36493371439645	chr4	149425871	149426674	+	0	NA	Intergenic	PB1D10|SINE|Alu	-16291	NR_029751	723848		NR_029751	miRBase:MI0000584	Mir34a	Mirn34a|mmu-mir-34a	microRNA 34a	ncRNA
common_peak1-13431-11-9-0.186765489364251-0.344532117358383	chr19	55231901	55232379	+	0	NA	Intergenic	Intergenic	-23235	NM_009348	21684	Mm.42139	NM_009348	ENSMUSG00000024979	Tectb	Tctnb	tectorin beta	protein-coding
common_peak2-24214-26-28-0.0699180970308904-0.316008636696532	chr16	78264438	78265238	+	0	NA	Intergenic	B1F1|SINE|Alu	-9139	NR_045698	100503619	Mm.387531	NR_045698		E330011O21Rik	-	RIKEN cDNA E330011O21 gene	ncRNA
common_peak1-11114-17-7-1.21829633820504-1.55050753388977	chr15	62260678	62261483	+	0	NA	Intergenic	Intergenic	-210074	NR_003523	67552	Mm.484027	NM_026230		H2afy3	4933432H23Rik	H2A histone family, member Y3	pseudo
unique_peak1-4620-11-5-0.923731083530457-1.477227296591	chr3	69793969	69794573	+	0	NA	Intergenic	Intergenic	-17264	NM_001018031	229389	Mm.331071	NM_001018031	ENSMUSG00000027788	Otol1	Gm414	otolin 1 homolog (zebrafish)	protein-coding
unique_peak2-34882-9-31--1.81038659359578-3.08022526292111	chr15	79769812	79770891	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-7275	NM_144811	52609	Mm.323442	NM_144811	ENSMUSG00000053411	Cbx7	1600014J01Rik|AI851678|D15Ertd417e	chromobox 7	protein-coding
common_peak1-9355-11-12--0.191746133889479-0.310474156842889	chr11	97363015	97363586	+	0	NA	3' UTR (NM_021493, exon 19 of 19)	3' UTR (NM_021493, exon 19 of 19)	-1646	NM_001289118	100141474	Mm.482426	NM_001289118		4933428G20Rik	-	RIKEN cDNA 4933428G20 gene	protein-coding
unique_peak1-484-9-3-1.18961340640422-1.57096726280955	chr1	177703725	177704244	+	0	NA	intron (NM_029453, intron 14 of 27)	ID_B1|SINE|B4	75260	NM_029453	75820	Mm.50361	NM_029453	ENSMUSG00000026523	Wdr64	4930415O10Rik|4930511H01Rik	WD repeat domain 64	protein-coding
unique_peak2-33246-5-7--0.704380336005853-1.01466476204226	chr10	127030474	127030793	+	0	NA	intron (NM_008512, intron 9 of 88)	intron (NM_008512, intron 9 of 88)	27571	NM_008512	16971	Mm.271854	NM_008512	ENSMUSG00000040249	Lrp1	A2mr|AI316852|CD91|Lrp|b2b1554Clo	low density lipoprotein receptor-related protein 1	protein-coding
unique_peak2-39449-2-12--2.61789397440441-2.55640854263862	chr9	48984296	48984982	+	0	NA	Intergenic	Intergenic	73755	NM_030709	80893	Mm.72799	NM_030709	ENSMUSG00000032268	Tmprss5	spinesin	transmembrane protease, serine 5 (spinesin)	protein-coding
common_peak1-11888-27-8-1.82162094945292-3.64934937127727	chr16	97658515	97659720	+	0	NA	3' UTR (NM_019517, exon 9 of 9)	3' UTR (NM_019517, exon 9 of 9)	25395	NM_010846	17857	Mm.33996	NM_010846	ENSMUSG00000000386	Mx1	AI893580|Mx|Mx-1	MX dynamin-like GTPase 1	protein-coding
common_peak2-31082-17-22--0.305265617851975-0.348739088570342	chr8	24975371	24976441	+	0	NA	intron (NM_001277239, intron 4 of 7)	intron (NM_001277239, intron 4 of 7)	195773	NM_177086	320158	Mm.121274	NM_177086	ENSMUSG00000037492	Zmat4	9630048M01Rik	zinc finger, matrin type 4	protein-coding
common_peak1-7621-24-14-0.886319307159198-1.33403699391683	chr1	61638529	61639431	+	0	NA	Intergenic	Intergenic	-46418	NM_001081050	72823	Mm.35153	NM_001081050	ENSMUSG00000052062	Pard3b	1810008K04Rik|2010002N16Rik|2810455B10Rik|Als2cr19|PAR3B|PAR3L|PAR3beta	par-3 family cell polarity regulator beta	protein-coding
common_peak2-20296-38-30-0.617256348911655-1.21120768321511	chr1	193414283	193415358	+	0	NA	intron (NM_178632, intron 4 of 19)	intron (NM_178632, intron 4 of 19)	15207	NM_178632	77065	Mm.338175	NM_178632	ENSMUSG00000037461	Ints7	5930412E23Rik	integrator complex subunit 7	protein-coding
common_peak1-17759-13-48--1.83623781347744-4.58197687146261	chr7	89632499	89633239	+	0	NA	intron (NM_001190374, intron 7 of 29)	B4|SINE|B4	148665	NM_001190374	269959	Mm.65306	NM_001190374	ENSMUSG00000070469	Adamtsl3	9230119C12Rik|C130057K09|mKIAA1233	ADAMTS-like 3	protein-coding
common_peak1-17609-16-31--0.881736357731938-1.20073456579999	chr7	45128924	45129708	+	0	NA	Intergenic	Intergenic	1390588	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak2-24465-11-31--1.49130641574839-2.45535166244229	chr17	24140959	24141733	+	0	NA	Intergenic	Intergenic	-6279	NM_133731	70835	Mm.157351	NM_133731	ENSMUSG00000045027	Prss22	4733401N09Rik|BSSP-4|SP001LA	protease, serine 22	protein-coding
unique_peak1-6419-16-4-1.7963355473807-2.18192634393779	chr7	86936640	86937140	+	0	NA	TTS (NM_008588)	TTS (NM_008588)	1586	NM_008588	17292	Mm.1404	NM_008588	ENSMUSG00000030544	Mesp1	bHLHc5	mesoderm posterior 1	protein-coding
common_peak1-16516-9-24--1.4542427833705-1.83731222263754	chr5	140603870	140604383	+	0	NA	intron (NM_010752, intron 13 of 17)	intron (NM_010752, intron 13 of 17)	193380	NM_010752	17120	Mm.27250	NM_010752	ENSMUSG00000029554	Mad1l1	AI173502|AW550425|Mad1	MAD1 mitotic arrest deficient 1-like 1	protein-coding
unique_peak2-32913-2-5--1.50241675698448-1.08602067057793	chr10	22702005	22702412	+	0	NA	Intergenic	Intergenic	-162274	NM_011545	21412	Mm.16497	NM_011545	ENSMUSG00000045680	Tcf21	Pod-1|Pod1|bHLHa23|capsulin|epc|epicardin	transcription factor 21	protein-coding
unique_peak1-444-6-3-0.565398110380302-1.08602067057793	chr1	166041654	166042032	+	0	NA	Intergenic	Intergenic	-3552	NM_011347	20344	Mm.3337	NM_011347	ENSMUSG00000026580	Selp	CD62P|GMP-140|Grmp|LECAM3|PADGEM	selectin, platelet	protein-coding
unique_peak2-35201-8-13--0.802132504110034-0.562038191119711	chr16	78317659	78318284	+	0	NA	intron (NM_001025192, intron 1 of 6)	intron (NM_001025192, intron 1 of 6)	16055	NM_001276263	13052	Mm.66222	NM_009988	ENSMUSG00000022865	Cxadr	2610206D03Rik|AU016810|AW553441|CAR|MCAR|MCVADR	coxsackie virus and adenovirus receptor	protein-coding
common_peak1-7627-106-134-0.260951257954888-0.877037575546982	chr1	64121541	64122605	+	0	NA	intron (NM_033563, intron 2 of 3)	Lx6|LINE|L1	-32998	NR_105864	102466760		NR_105864		Mir6899	mmu-mir-6899	microRNA mir-6899	ncRNA
common_peak2-25983-50-67--0.0465225247713867-0.302662697069732	chr19	53943600	53944555	+	0	NA	Intergenic	Intergenic	-22644	NM_011050	18569	Mm.1605	NM_011050	ENSMUSG00000024975	Pdcd4	D19Ucla1|Ma3|Tis	programmed cell death 4	protein-coding
unique_peak1-2331-12-7-0.648775985087639-0.697979855752659	chr15	83469313	83470099	+	0	NA	intron (NM_001271473, intron 4 of 19)	intron (NM_001271473, intron 4 of 19)	-44119	NM_183017	223723	Mm.46778	NM_183017	ENSMUSG00000016757	Ttll12	BC055368|D430005B17	tubulin tyrosine ligase-like family, member 12	protein-coding
common_peak2-24900-14-30--1.05498015002923-1.40782320807776	chr17	84106759	84107600	+	0	NA	intron (NM_001171053, intron 1 of 13)	ID_B1|SINE|B4	1676	NM_001171052	116871	Mm.277668	NM_054082	ENSMUSG00000055817	Mta3	1110002J22Rik|mKIAA1266	metastasis associated 3	protein-coding
unique_peak1-1191-15-3-2.01216475055566-3.03427613622886	chr11	102572789	102573693	+	0	NA	Intergenic	RLTR1C|LTR|ERV1	-14202	NM_025918	52715	Mm.277638	NM_025918	ENSMUSG00000020925	Ccdc43	2610001E01Rik|D11Ertd707e	coiled-coil domain containing 43	protein-coding
common_peak2-31867-16-31--0.881736357731938-1.20073456579999	chr9	53536916	53537914	+	0	NA	Intergenic	Intergenic	-23078	NM_175562	270160	Mm.290285	NM_175562	ENSMUSG00000055069	Rab39	C230094F14Rik|Rab39a	RAB39, member RAS oncogene family	protein-coding
unique_peak1-5781-10-7-0.356415345008769-1.12966497611638	chr6	54333049	54333587	+	0	NA	intron (NR_033635, intron 3 of 13)	intron (NR_033635, intron 3 of 13)	46897	NR_033635	100042056	Mm.448157	NM_198118	ENSMUSG00000073067	9130019P16Rik	6430501H15Rik|OTTMUSG00000023151	RIKEN cDNA 9130019P16 gene	ncRNA
common_peak1-13021-37-33-0.43853023023548-0.767679714496325	chr19	5424328	5425682	+	0	NA	promoter-TSS (NM_024176)	promoter-TSS (NM_024176)	-26	NM_001291080	66556	Mm.275446	NM_024176	ENSMUSG00000024914	Drap1	2310074H19Rik|NC2-alpha	Dr1 associated protein 1 (negative cofactor 2 alpha)	protein-coding
common_peak2-25212-15-10-0.552733131918359-0.604422558181019	chr18	60899856	60900400	+	0	NA	Intergenic	Intergenic	-27085	NM_008306	15531	Mm.181862	NM_008306	ENSMUSG00000054008	Ndst1	1200015G06Rik|Hsst|NDST-1|b2b2230Clo	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1	protein-coding
unique_peak2-39252-2-6--1.72480917832092-1.26211192963361	chr8	117328148	117328738	+	0	NA	intron (NM_019573, intron 8 of 8)	intron (NM_019573, intron 8 of 8)	364891	NM_019573	80707	Mm.440420	NM_019573	ENSMUSG00000004637	Wwox	5330426P09Rik|9030416C10Rik|WOX1	WW domain-containing oxidoreductase	protein-coding
unique_peak2-34661-4-5--0.608423014574403-0.909929411522249	chr15	75841347	75841715	+	0	NA	intron (NM_134087, intron 1 of 4)	intron (NM_134087, intron 1 of 4)	-1603	NM_001168253	105732	Mm.267178	NM_134087	ENSMUSG00000046761	Fam83h	AA409316	family with sequence similarity 83, member H	protein-coding
common_peak2-28868-62-113--0.422138555362657-1.16373426469041	chr5	76303409	76305285	+	0	NA	Intergenic	RSINE1|SINE|B4	70106	NM_010612	16542	Mm.285	NM_010612	ENSMUSG00000062960	Kdr	6130401C07|Flk-1|Flk1|Krd-1|Ly73|VEGFR-2|VEGFR2|sVEGFR-2	kinase insert domain protein receptor	protein-coding
unique_peak1-6976-9-4-0.867685311516858-1.36011389749466	chr8	119552650	119553170	+	0	NA	intron (NM_029686, intron 29 of 42)	intron (NM_029686, intron 29 of 42)	-35561	NM_026572	68133	Mm.258462	NM_026572	ENSMUSG00000034424	Gcsh	1100001L02Rik|5730591C18Rik	glycine cleavage system protein H (aminomethyl carrier)	protein-coding
common_peak2-22352-22-27--0.160070816970199-0.317737750275047	chr13	24799988	24800617	+	0	NA	intron (NM_029679, intron 15 of 22)	Lx7|LINE|L1	53504	NM_020567	57441	Mm.12239	NM_020567	ENSMUSG00000006715	Gmnn	AW546347|Gem	geminin	protein-coding
common_peak2-30048-55-53-0.449732368989234-1.05853523251719	chr6	127453408	127454363	+	0	NA	Intergenic	Intergenic	50144	NM_181402	101187	Mm.110818	NM_181402	ENSMUSG00000037997	Parp11	5330431N24Rik|AI851877|ARTD11|HIN1L	poly (ADP-ribose) polymerase family, member 11	protein-coding
common_peak1-17980-24-16-0.705747061517378-1.02077663956384	chr7	133782611	133783554	+	0	NA	Intergenic	Intergenic	-9741	NM_029339	75565	Mm.45686	NM_029339	ENSMUSG00000030714	Ccdc101	1700023O11Rik|9530025I05Rik	coiled-coil domain containing 101	protein-coding
common_peak2-21863-75-104-0.0248214740771626-0.310292512341386	chr12	44268352	44269879	+	0	NA	Intergenic	Intergenic	1041940	NM_013760	27362	Mm.27432	NM_013760	ENSMUSG00000014905	Dnajb9	AA408011|AA673251|AA673481|AW556981|ERdj4|Mdg1|mDj7	DnaJ (Hsp40) homolog, subfamily B, member 9	protein-coding
common_peak2-22201-17-30--0.735899972181837-0.841847921495509	chr12	110991472	110992646	+	0	NA	Intergenic	Intergenic	5971	NR_037233	100499517		NR_037233	miRBase:MI0014035	Mir3072	mmu-mir-3072	microRNA 3072	ncRNA
common_peak2-20398-18-26--0.441968350935117-0.471456499375593	chr10	21993767	21994721	+	0	NA	intron (NM_001177775, intron 1 of 5)	intron (NM_001177775, intron 1 of 5)	964	NM_001177775	667281	Mm.484254	NM_001177775	ENSMUSG00000075297	H60b	EG667281	histocompatibility 60b	protein-coding
common_peak1-16534-35-80--0.90847974442212-2.75573330456544	chr5	142928686	142929869	+	0	NA	intron (NM_199068, intron 5 of 8)	intron (NM_199068, intron 5 of 8)	-10608	NM_172725	231855	Mm.78250	NM_172725	ENSMUSG00000039623	Ap5z1	C330006K01Rik	adaptor-related protein complex 5, zeta 1 subunit	protein-coding
common_peak1-18911-16-20--0.274053780510699-0.353907621462756	chr9	41950757	41951507	+	0	NA	Intergenic	Intergenic	-18760	NM_011436	20660	Mm.121920	NM_011436		Sorl1	2900010L19Rik|AI596264|AW261561|LR11|SorLA|gp250|mSorLA	sortilin-related receptor, LDLR class A repeats-containing	protein-coding
common_peak2-21690-156-226-0.182234770884299-0.760784246961174	chr11	105180779	105182614	+	0	NA	intron (NM_008626, intron 1 of 29)	MTC|LTR|MaLR	27736	NM_008626	17534	Mm.235616	NM_008626	ENSMUSG00000020695	Mrc2	Endo180|mKIAA0709|uPARAP	mannose receptor, C type 2	protein-coding
common_peak1-17336-85-106-0.213936261723505-0.607237392516043	chr6	147475469	147476946	+	0	NA	intron (NM_025911, intron 3 of 12)	RMER19B|LTR|ERVK	51814	NM_025911	67015	Mm.209774	NM_025911	ENSMUSG00000030301	Ccdc91	1700086G08Rik|1810060J02Rik|AU045683|AW555238|p56	coiled-coil domain containing 91	protein-coding
common_peak2-27341-50-107--0.713947185684516-2.43120736233187	chr3	75556039	75556939	+	0	NA	Intergenic	ORR1D2|LTR|MaLR	-96836	NR_040539	69193	Mm.374088	NR_040539		2410007B07Rik	-	RIKEN cDNA 2410007B07 gene	ncRNA
common_peak2-21447-24-23-0.208247402046561-0.407645899519042	chr11	86647671	86648618	+	0	NA	Intergenic	Intergenic	-26982	NM_026191	67487	Mm.260627	NM_026191	ENSMUSG00000018425	Dhx40	2410016C14Rik|ARG147|DDX40|PAD	DEAH (Asp-Glu-Ala-His) box polypeptide 40	protein-coding
unique_peak2-32773-3-8--1.58390809140159-1.39487600375387	chr1	176832656	176833139	+	0	NA	intron (NM_011825, intron 1 of 1)	intron (NM_011825, intron 1 of 1)	19053	NM_011825	23893	Mm.25760	NM_011825	ENSMUSG00000050069	Grem2	Gremlin2|Prdc	gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis)	protein-coding
unique_peak1-3213-9-1-2.18961340640422-2.31132995230379	chr18	57614642	57615187	+	0	NA	Intergenic	Intergenic	-13226	NM_001134697	629147	Mm.57415	NM_001134697	ENSMUSG00000069372	Ctxn3	ENSMUSG00000069372	cortexin 3	protein-coding
common_peak2-28130-36-47--0.105641414553402-0.310471923828336	chr4	95160836	95161965	+	0	NA	Intergenic	MLT1B|LTR|MaLR	-62798	NM_001113412	75578	Mm.276098	NM_029347	ENSMUSG00000028573	Fggy	2310009E04Rik	FGGY carbohydrate kinase domain containing	protein-coding
common_peak2-29746-29-42--0.313974674086987-0.439405572480898	chr6	86438319	86438874	+	0	NA	promoter-TSS (NR_040293)	promoter-TSS (NR_040293)	-375	NR_040292	381792	Mm.333223	NR_040292		2310040G24Rik	-	RIKEN cDNA 2310040G24 gene	ncRNA
unique_peak2-39093-6-17--1.60452689106201-1.49151883326343	chr8	76901573	76902168	+	0	NA	Intergenic	Intergenic	-495203	NM_027837	71597	Mm.158735	NM_027837	ENSMUSG00000031621	Isx	9130012O13Rik|Pix-1	intestine specific homeobox	protein-coding
common_peak2-20260-11-11--0.0762689164695427-0.301029995663976	chr1	186610139	186610573	+	0	NA	TTS (NM_001290273)	TTS (NM_001290273)	24823	NM_001290273	66112	Mm.272457	NM_001081361	ENSMUSG00000026621	Marc1	1300013F15Rik|Mosc1	mitochondrial amidoxime reducing component 1	protein-coding
common_peak1-14026-11-12--0.191746133889479-0.310474156842889	chr2	114174796	114175319	+	0	NA	Intergenic	Intergenic	-147889	NM_175466	228491	Mm.132523	NM_175466	ENSMUSG00000040321	Zfp770	6430601A21Rik|Znf770	zinc finger protein 770	protein-coding
common_peak1-16480-50-91--0.482621639578061-1.16916033364214	chr5	137612526	137614142	+	0	NA	Intergenic	ID_B1|SINE|B4	-21257	NM_201373	384309	Mm.100647	NM_201373		Trim56	A130009K11Rik|Gm452|RNF109	tripartite motif-containing 56	protein-coding
common_peak2-32104-14-7-0.899216160357645-0.947446088118041	chr9	99700725	99701082	+	0	NA	Intergenic	Intergenic	75686	NM_011440	20669	Mm.261595	NM_011440	ENSMUSG00000053747	Sox14	-	SRY (sex determining region Y)-box 14	protein-coding
common_peak2-19619-11-6-0.701338662194009-1.32595962126035	chr1	36473733	36474146	+	0	NA	intron (NM_001277076, intron 42 of 52)	intron (NM_001277076, intron 42 of 52)	28145	NM_001013374	214895	Mm.287854	NM_001013374	ENSMUSG00000001143	Lman2l	A630028F14Rik|VIP36-like|VIPL	lectin, mannose-binding 2-like	protein-coding
unique_peak1-7180-10-3-1.35641534500877-1.75805390616669	chr9	62627578	62628122	+	0	NA	intron (NM_176922, intron 28 of 29)	intron (NM_176922, intron 28 of 29)	31605	NM_010193	14155	Mm.24069	NM_010193	ENSMUSG00000032244	Fem1b	mKIAA0396	feminization 1 homolog b (C. elegans)	protein-coding
unique_peak2-34789-3-6--1.22133801201688-1.08602067057793	chr15	62295435	62295714	+	0	NA	Intergenic	Intergenic	-244568	NR_003523	67552	Mm.484027	NM_026230		H2afy3	4933432H23Rik	H2A histone family, member Y3	pseudo
common_peak2-26756-16-16-0.0308008010177225-0.307611222530525	chr2	137716101	137716889	+	0	NA	Intergenic	L1Md_T|LINE|L1	-365825	NM_001025431	228662	Mm.153405	NM_145534	ENSMUSG00000062098	Btbd3	mKIAA0952	BTB (POZ) domain containing 3	protein-coding
common_peak1-12472-13-5-1.19350952991661-1.95509489018123	chr17	84113565	84114106	+	0	NA	intron (NM_001171053, intron 2 of 13)	B1F1|SINE|Alu	8332	NM_001171052	116871	Mm.277668	NM_054082	ENSMUSG00000055817	Mta3	1110002J22Rik|mKIAA1266	metastasis associated 3	protein-coding
common_peak1-16367-33-12-1.63089784438444-3.75499050687144	chr5	122524491	122525603	+	0	NA	Intergenic	Intergenic	-25942	NM_010861	17906	Mm.1529	NM_010861	ENSMUSG00000013936	Myl2	MLC-2|MLC-2v|Mlc2v|Mylpc	myosin, light polypeptide 2, regulatory, cardiac, slow	protein-coding
common_peak1-19054-9-4-0.867685311516858-1.36011389749466	chr9	66945439	66945951	+	0	NA	Intergenic	Intergenic	-35673	NR_045748	100502636	Mm.412607	NR_045748		Gm19299	-	predicted gene, 19299	ncRNA
common_peak2-25596-29-23-0.527327579893955-0.844067898188802	chr19	8756852	8757561	+	0	NA	3' UTR (NM_001112697, exon 3 of 3)	3' UTR (NM_001112697, exon 3 of 3)	18711	NM_001112697	12669	Mm.240607	NM_007698	ENSMUSG00000032773	Chrm1	Chrm-1|M1|M1R	cholinergic receptor, muscarinic 1, CNS	protein-coding
unique_peak1-6612-9-0-3.18961340640422-3.01029995663981	chr8	3313688	3314287	+	0	NA	Intergenic	Intergenic	-34370	NM_010568	16337	Mm.268003	NM_010568	ENSMUSG00000005534	Insr	4932439J01Rik|CD220|D630014A15Rik|IR|IR-A|IR-B	insulin receptor	protein-coding
common_peak1-16352-7-18--1.4488366831454-1.38887104242188	chr5	121397881	121398402	+	0	NA	intron (NM_011286, intron 16 of 21)	intron (NM_011286, intron 16 of 21)	33314	NM_133893	100535	Mm.247620	NM_133893	ENSMUSG00000032623	Oas1d	AA536864|C85127|oasl8	2'-5' oligoadenylate synthetase 1D	protein-coding
common_peak2-21613-181-166-0.883674653725569-9.68187728366067	chr11	100287398	100291685	+	0	NA	intron (NM_026561, intron 8 of 8)	B1_Mus1|SINE|Alu	12533	NM_001163481	14230	Mm.3894	NM_010221	ENSMUSG00000001555	Fkbp10	AI325255|FKBP-10|FKBP-65|FKBP65|Fkbp-rs1|Fkbp1-rs|Fkbp6|Fkbprp	FK506 binding protein 10	protein-coding
common_peak2-27410-13-11-0.193509529916613-0.379391706698377	chr3	88495292	88495872	+	0	NA	intron (NM_028814, intron 4 of 13)	(TTTTTG)n|Simple_repeat|Simple_repeat	5866	NM_028814	74200	Mm.251800	NM_028814	ENSMUSG00000028060	2810403A07Rik	A430106P18Rik|AI256352|AI451678|Blom7|Kiaa0907	RIKEN cDNA 2810403A07 gene	protein-coding
common_peak2-30241-6-8--0.60452689106201-1.03789460276074	chr7	5013856	5014216	+	0	NA	intron (NM_001205231, intron 1 of 11)	CpG	291	NM_001205231	22185	Mm.360389	NM_133671	ENSMUSG00000030435	U2af2	65kDa	U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2	protein-coding
common_peak2-20991-66-113--0.3144063497389-0.768981819768006	chr11	22858574	22860982	+	0	NA	intron (NM_144514, intron 1 of 2)	(TG)n|Simple_repeat|Simple_repeat	-12227	NM_011663	22183	Mm.29542	NM_011663	ENSMUSG00000044068	Zrsr1	D11Ncvs75|Irlgs2|SP2|U2af1-rs1|U2afbp-rs	zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1	protein-coding
unique_peak2-35220-6-6--0.241956811677302-0.947717972411649	chr16	91564516	91564862	+	0	NA	TTS (NM_008338)	TTS (NM_008338)	17350	NM_008338	15980	Mm.249364	NM_008338		Ifngr2	Ifgr2|Ifgt	interferon gamma receptor 2	protein-coding
common_peak2-30510-7-6--0.00826409175941478-0.97990265578305	chr7	65471259	65471665	+	0	NA	Intergenic	Intergenic	-442110	NM_009728	11982	Mm.135129	NM_009728	ENSMUSG00000025324	Atp10a	Atp10c|pfatp	ATPase, class V, type 10A	protein-coding
common_peak1-10725-9-5-0.604650905683064-1.21398586181642	chr14	63131358	63131854	+	0	NA	Intergenic	Intergenic	-42968	NM_001243857	629059	Mm.291864	NM_001243857	ENSMUSG00000035184	Fam124a	EG629059	family with sequence similarity 124, member A	protein-coding
common_peak2-27292-38-62--0.405827264201386-0.688998294217078	chr3	58691521	58692611	+	0	NA	Intergenic	Intergenic	-2932	NM_153385	229320	Mm.131502	NM_153384	ENSMUSG00000043850	Clrn1	A130002D11Rik|USH3|Ush3a	clarin 1	protein-coding
unique_peak2-36738-2-5--1.50241675698448-1.08602067057793	chr3	57424007	57424421	+	0	NA	Intergenic	Intergenic	31392	NM_175095	52245	Mm.21901	NM_175095		Commd2	1190017G07Rik|AI047739|D3Ertd176e|HSPC042	COMM domain containing 2	protein-coding
common_peak2-26118-14-9-0.577288065470282-0.630231561310125	chr2	6162360	6162883	+	0	NA	intron (NR_040333, intron 1 of 6)	MIR|SINE|MIR	-28581	NM_024208	67856	Mm.38342	NM_024208	ENSMUSG00000039063	Echdc3	2310005D12Rik|AI662097	enoyl Coenzyme A hydratase domain containing 3	protein-coding
unique_peak2-34044-5-8--0.874305337448166-1.10484139239135	chr12	112828925	112829321	+	0	NA	intron (NM_021516, intron 1 of 16)	B1_Mus2|SINE|Alu	16402	NM_022801	17169	Mm.260504	NM_021516	ENSMUSG00000007411	Mark3	1600015G02Rik|A430080F22Rik|C-TAK1|ETK-1|ETK1|Emk2|MPK10	MAP/microtubule affinity-regulating kinase 3	protein-coding
common_peak2-20981-48-66--0.0951620392229575-0.316181169053401	chr11	21091242	21092292	+	0	NA	Intergenic	RLTR45|LTR|ERVK	-47268	NM_139061	245944	Mm.170103	NM_139061	ENSMUSG00000020128	Vps54	Hcc8|Vps54l|mSLP8|wr	vacuolar protein sorting 54 (yeast)	protein-coding
common_peak1-19264-93-135-0.0236070222559297-0.308188840000872	chr9	113707378	113708592	+	0	NA	intron (NM_001286603, intron 1 of 4)	intron (NM_001286603, intron 1 of 4)	5537	NM_001286603	76499	Mm.222272	NM_029633	ENSMUSG00000033392	Clasp2	1500004F14Rik|8030404L10Rik|C77448|CLASP2beta|mKIAA0627	CLIP associating protein 2	protein-coding
common_peak2-19721-9-8-0.0196884049619079-1.03275496310833	chr1	71100228	71100766	+	0	NA	intron (NM_007525, intron 6 of 10)	intron (NM_007525, intron 6 of 10)	49049	NM_007525	12021	Mm.10764	NM_007525	ENSMUSG00000026196	Bard1	ENSMUSG00000060893|ENSMUSG00000073653	BRCA1 associated RING domain 1	protein-coding
unique_peak1-1626-49-10-2.54685220438789-9.8496207496751	chr13	44869360	44870148	+	0	NA	intron (NM_021878, intron 2 of 18)	intron (NM_021878, intron 2 of 18)	43114	NM_001205043	16468	Mm.25059	NM_021878	ENSMUSG00000038518	Jarid2	Jmj|jumonji	jumonji, AT rich interactive domain 2	protein-coding
unique_peak1-6476-7-1-1.79909083029819-1.80617997398389	chr7	110985911	110986415	+	0	NA	Intergenic	Intergenic	2872	NM_001127686	436003	Mm.475617	NM_001127686		Hbb-bh2	EG436003|Gm5736	hemoglobin beta, bh2	protein-coding
common_peak1-17270-122-166-0.197948064487936-0.711423430592844	chr6	134926216	134928732	+	0	NA	Intergenic	B3A|SINE|B2	-4545	NM_001109914	381823	Mm.296104	NM_001109914	ENSMUSG00000090698	Apold1	Gm1075	apolipoprotein L domain containing 1	protein-coding
unique_peak2-35246-8-6-0.197867495889966-1.03789460276074	chr16	97684870	97685224	+	0	NA	promoter-TSS (NR_003520)	promoter-TSS (NR_003520)	-534	NR_003520	17857	Mm.33996	NM_010846	ENSMUSG00000000386	Mx1	AI893580|Mx|Mx-1	MX dynamin-like GTPase 1	protein-coding
common_peak1-18261-33-18-1.08341004908194-2.15925086250253	chr8	34286702	34288068	+	0	NA	Intergenic	L1Md_F2|LINE|L1	208614	NM_001122822	22427	Mm.228805	NM_011721	ENSMUSG00000031583	Wrn	AI846146	Werner syndrome homolog (human)	protein-coding
common_peak2-21175-44-87--0.637538784068762-1.66819226071313	chr11	59661773	59663792	+	0	NA	intron (NM_134029, intron 1 of 4)	intron (NM_134029, intron 1 of 4)	1207	NM_134029	103850	Mm.41761	NM_134029	ENSMUSG00000032615	Nt5m	2010013E09Rik|AI846937|dNT-2	5',3'-nucleotidase, mitochondrial	protein-coding
unique_peak1-6030-11-5-0.923731083530457-1.477227296591	chr6	113639579	113640028	+	0	NA	intron (NM_172161, intron 11 of 12)	RSINE1|SINE|B4	-7690	NM_001033463	381801	Mm.333322	NM_001033463	ENSMUSG00000056952	Tatdn2	AI646012|mKIAA0218	TatD DNase domain containing 2	protein-coding
common_peak2-26771-25-19-0.539921810457743-0.756750750680359	chr2	143903367	143904253	+	0	NA	Intergenic	LTR16C|LTR|ERVL	44972	NM_207275	403171	Mm.389362	NM_207275	ENSMUSG00000037307	Banf2	4930517K23Rik|Baf-L|Baf-like|Gm115	barrier to autointegration factor 2	protein-coding
unique_peak2-33042-13-49--1.86538415913696-4.77286552781164	chr10	72297118	72297577	+	0	NA	Intergenic	Intergenic	179753	NM_001293683	52696	Mm.62876	NM_025635	ENSMUSG00000019923	Zwint	2010007E07Rik|2600001N01Rik|D10Ertd749e|Zwint-1	ZW10 interactor	protein-coding
unique_peak1-283-11-5-0.923731083530457-1.477227296591	chr1	106797492	106797895	+	0	NA	intron (NM_011800, intron 1 of 11)	intron (NM_011800, intron 1 of 11)	132297	NM_011800	23836	Mm.103640	NM_011800	ENSMUSG00000050840	Cdh20	Cdh7	cadherin 20	protein-coding
common_peak2-24870-16-15-0.118263642268062-0.328191099940264	chr17	80127559	80128238	+	0	NA	Intergenic	Intergenic	-13517	NM_009994	13078	Mm.214016	NM_009994	ENSMUSG00000024087	Cyp1b1	CP1B|P4501b1	cytochrome P450, family 1, subfamily b, polypeptide 1	protein-coding
unique_peak2-37385-4-6--0.830815435910851-0.989110657569874	chr4	139380116	139380448	+	0	NA	intron (NM_011039, intron 4 of 8)	intron (NM_011039, intron 4 of 8)	8601	NM_011039	18509	Mm.218760	NM_011039	ENSMUSG00000028736	Pax7	Pax-7	paired box 7	protein-coding
unique_peak2-33459-4-7--1.02346051385325-1.09384600808989	chr11	66985325	66985705	+	0	NA	intron (NM_001039545, intron 2 of 39)	intron (NM_001039545, intron 2 of 39)	986	NM_001039545	17882	Mm.422801	NM_144961	ENSMUSG00000033196	Myh2	MHC2A|MyHC-IIa|Myh2a|Myhs-f|Myhs-f1|Myhsf1	myosin, heavy polypeptide 2, skeletal muscle, adult	protein-coding
unique_peak2-38898-4-9--1.34538860874061-1.36011389749466	chr8	11556753	11557207	+	0	NA	exon (NM_011919, exon 1 of 2)	exon (NM_011919, exon 1 of 2)	914	NM_011919	26356	Mm.25709	NM_011919	ENSMUSG00000045969	Ing1	2610028J21Rik|AA407184|AI875420|mING1h|p33Ing1|p37Ing1b	inhibitor of growth family, member 1	protein-coding
common_peak2-28738-11-18--0.739233929191972-0.671582559449692	chr5	36712695	36713225	+	0	NA	intron (NM_030889, intron 1 of 26)	MTD|LTR|MaLR	27828	NM_030889	81840	Mm.34113	NM_030889	ENSMUSG00000029093	Sorcs2	N28137|mKIAA1329	sortilin-related VPS10 domain containing receptor 2	protein-coding
common_peak2-30616-87-168--0.405242330501015-1.47839768362865	chr7	90128988	90131040	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-10113	NR_045855	71285	Mm.76818	NR_045855		4933430H16Rik	-	RIKEN cDNA 4933430H16 gene	ncRNA
common_peak2-28446-12-7-0.648775985087639-0.697979855752659	chr4	150544015	150544451	+	0	NA	intron (NM_001081557, intron 6 of 23)	intron (NM_001081557, intron 6 of 23)	-112171	NM_009498	22319	Mm.273930	NM_009498	ENSMUSG00000028955	Vamp3	D130027G05Rik|VAMP-3|ceb	vesicle-associated membrane protein 3	protein-coding
common_peak2-26689-41-21-1.24171708621136-3.2524299487632	chr2	126030405	126031265	+	0	NA	Intergenic	Intergenic	52958	NM_026981	69185	Mm.29019	NM_026981	ENSMUSG00000023330	Dtwd1	1810033A06Rik	DTW domain containing 1	protein-coding
common_peak2-21920-3-13--2.22133801201688-2.36932189928148	chr12	17220029	17220594	+	0	NA	Intergenic	L2a|LINE|L2	-36617	NM_201531	382571	Mm.40173	NM_201531	ENSMUSG00000051726	Kcnf1	Gm1182|Kv5.1	potassium voltage-gated channel, subfamily F, member 1	protein-coding
unique_peak1-1013-22-7-1.6472841050874-2.63337704757512	chr11	74483941	74484963	+	0	NA	TTS (NM_001081158)	TTS (NM_001081158)	21455	NM_001081158	74148	Mm.214574	NM_001081158	ENSMUSG00000020741	Cluh	1300001I01Rik|Kiaa0664|mKIAA0664	clustered mitochondria (cluA/CLU1) homolog	protein-coding
unique_peak1-992-16-2-2.53330114154691-3.78760380288747	chr11	69573767	69574070	+	0	NA	exon (NM_019871, exon 2 of 2)	exon (NM_019871, exon 2 of 2)	1428	NM_019871	56293	Mm.6211	NM_019871	ENSMUSG00000018776	Slc35g3	Amac1	solute carrier family 35, member G3	protein-coding
common_peak2-30815-22-43--0.812147513549893-1.34810744351377	chr7	128460880	128461869	+	0	NA	Intergenic	Intergenic	-74436	NM_001081327	195646	Mm.247449	NM_177575	ENSMUSG00000046321	Hs3st2	6430516N12Rik|A830061E14Rik|AW491345	heparan sulfate (glucosamine) 3-O-sulfotransferase 2	protein-coding
common_peak2-20624-18-43--1.14651246740895-2.16720861012097	chr10	80385790	80386811	+	0	NA	Intergenic	Intergenic	-5310	NM_010722	16907	Mm.7362	NM_010722	ENSMUSG00000062075	Lmnb2	-	lamin B2	protein-coding
unique_peak1-6999-13-1-2.77847203063777-3.64038867156802	chr8	122463695	122464323	+	0	NA	intron (NM_009462, intron 3 of 13)	intron (NM_009462, intron 3 of 13)	29257	NM_009462	22224	Mm.256910	NM_009462	ENSMUSG00000031826	Usp10	2610014N07Rik|UBPO|Uchrp|mKIAA0190	ubiquitin specific peptidase 10	protein-coding
common_peak2-26672-7-8--0.370834171144123-1.00793137938329	chr2	122368905	122369122	+	0	NA	Intergenic	Intergenic	58336	NM_001085518	381417	Mm.482295	NM_001085518	ENSMUSG00000079071	Gm14085	OTTMUSG00000015615	predicted gene 14085	protein-coding
common_peak2-21034-25-25-0.161410187204014-0.36542888694933	chr11	33659812	33660557	+	0	NA	intron (NM_001190885, intron 1 of 8)	intron (NM_001190885, intron 1 of 8)	83401	NM_027398	70357	Mm.252514	NM_027398	ENSMUSG00000053519	Kcnip1	KCHIP1|Kchip1.2	Kv channel-interacting protein 1	protein-coding
unique_peak1-5655-7-2-1.21412832957703-1.45399745587252	chr6	30079028	30079556	+	0	NA	exon (NM_001164229, exon 13 of 13)	exon (NM_001164229, exon 13 of 13)	36700	NR_029569	387177		NR_029569	miRBase:MI0000224	Mir182	Mirn182|mmu-mir-182	microRNA 182	ncRNA
common_peak2-25260-19-34--0.72659569028328-0.974620203848502	chr18	67205323	67206108	+	0	NA	Intergenic	Intergenic	-42237	NM_177137	14680	Mm.440746	NM_010307	ENSMUSG00000024524	Gnal	2610011C15Rik|9630020G10Rik|Galphaolf|Gna10|Golf	guanine nucleotide binding protein, alpha stimulating, olfactory type	protein-coding
common_peak2-23246-14-7-0.899216160357645-0.947446088118041	chr15	10759785	10760226	+	0	NA	intron (NR_040357, intron 1 of 2)	MTEb-int|LTR|MaLR	1199	NR_040357	100502601	Mm.399434	NR_040357		Gm19276	-	predicted gene, 19276	ncRNA
unique_peak2-34219-9-12--0.510826311736872-0.394412252720706	chr13	48878137	48878821	+	0	NA	Intergenic	Intergenic	87775	NM_011078	18676	Mm.486213	NM_011078	ENSMUSG00000038025	Phf2	GRC5	PHD finger protein 2	protein-coding
common_peak2-31738-14-18--0.348711353085941-0.360333814299795	chr9	15044738	15045613	+	0	NA	intron (NM_026955, intron 1 of 3)	intron (NM_026955, intron 1 of 3)	1686	NM_026955	69137	Mm.41396	NM_026955	ENSMUSG00000031937	Vstm5	2200002K05Rik	V-set and transmembrane domain containing 5	protein-coding
common_peak2-24295-27-20-0.599228528116475-0.90781512069806	chr17	23674571	23675272	+	0	NA	Intergenic	Intergenic	26272	NM_001033496	449521	Mm.268582	NM_001033496	ENSMUSG00000071256	Zfp213	BC038178|D17Ertd197e	zinc finger protein 213	protein-coding
unique_peak2-35200-0-5--3.42509343119537-1.32905871926422	chr16	76444822	76445267	+	0	NA	Intergenic	RLTR17|LTR|ERVK	-71750	NM_173440	268903	Mm.74711	NM_173440	ENSMUSG00000048490	Nrip1	6030458L20Rik|8430438I05Rik|9630050P12|AA959574|AW456757|RIP140	nuclear receptor interacting protein 1	protein-coding
common_peak1-10257-40-38-0.373573463888849-0.714844670794617	chr13	55361917	55363178	+	0	NA	intron (NM_008739, intron 6 of 22)	B2_Mm2|SINE|B2	51404	NM_008739	18193	Mm.12964	NM_008739	ENSMUSG00000021488	Nsd1	AI528500|KMT3B	nuclear receptor-binding SET-domain protein 1	protein-coding
common_peak2-21838-102-174--0.180122634992775-0.566008046006805	chr11	120632444	120633735	+	0	NA	Intergenic	L1Md_T|LINE|L1	12429	NM_009053	19719	Mm.871	NM_009053	ENSMUSG00000025158	Rfng	-	RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase	protein-coding
common_peak1-16139-20-17-0.318149783148881-0.440610794044987	chr5	73279424	73280283	+	0	NA	Intergenic	RLTR20A2|LTR|ERVK	-20166	NM_001113460	21682	Mm.319581	NM_013689	ENSMUSG00000029217	Tec	-	tec protein tyrosine kinase	protein-coding
unique_peak2-33643-4-5--0.608423014574403-0.909929411522249	chr11	98785163	98785452	+	0	NA	TTS (NM_011799)	TTS (NM_011799)	-13703	NM_009024	19401	Mm.439744	NM_009024	ENSMUSG00000037992	Rara	Nr1b1|RAR|RARalpha1	retinoic acid receptor, alpha	protein-coding
unique_peak1-2899-13-3-1.77847203063777-2.58603100924543	chr17	45692693	45693400	+	0	NA	exon (NM_008690, exon 1 of 6)	exon (NM_008690, exon 1 of 6)	381	NM_008690	18037	Mm.57043	NM_008690	ENSMUSG00000023947	Nfkbie	IKBE	nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, epsilon	protein-coding
common_peak2-24632-29-49--0.531566109159614-0.810079075897175	chr17	34943353	34944495	+	0	NA	Intergenic	B1F1|SINE|Alu	-2553	NM_009995	13079	Mm.440407	NM_009995	ENSMUSG00000024365	Cyp21a1	21-OH|21OH|21OHA|21OHB|CYP21OH-A|Cyp21|Cyp21-ps1|Cyp21B|Cyp21a2-ps|Cyp21a2ps|Oh21-1|Oh21-2	cytochrome P450, family 21, subfamily a, polypeptide 1	protein-coding
unique_peak2-32448-0-6--3.64748585253182-1.56314192529759	chr1	5072579	5073015	+	0	NA	promoter-TSS (NM_133826)	promoter-TSS (NM_133826)	-457	NM_133826	108664	Mm.27082	NM_133826	ENSMUSG00000033793	Atp6v1h	0710001F19Rik|AU022349|CGI-11|SFD|SFDalpha|SFDbeta|VMA13	ATPase, H+ transporting, lysosomal V1 subunit H	protein-coding
common_peak2-30615-20-13-0.680719862533589-0.809260849721102	chr7	90060210	90060704	+	0	NA	Intergenic	MLT2B1|LTR|ERVL	44614	NM_175366	108797	Mm.306789	NM_175366	ENSMUSG00000057706	Mex3b	4931439A04Rik|M-04814|Rkhd3|mKIAA2009	mex3 homolog B (C. elegans)	protein-coding
common_peak2-30123-19-17-0.232762325219374-0.392630012299441	chr6	137541024	137541815	+	0	NA	intron (NM_007945, intron 1 of 21)	MIR|SINE|MIR	-21889	NM_001271587	13860	Mm.235346	NM_007945	ENSMUSG00000015766	Eps8	AW261790	epidermal growth factor receptor pathway substrate 8	protein-coding
common_peak1-15345-14-10-0.439784541720347-0.519648556297791	chr4	53440498	53441133	+	0	NA	Intergenic	Intergenic	-12470	NM_001159633	100434	Mm.482207	NM_133891	ENSMUSG00000028412	Slc44a1	2210409B22Rik|4833416H08Rik|AW547365|CHTL1|CTL1|Cdw92	solute carrier family 44, member 1	protein-coding
unique_peak1-6557-12-0-3.64877598508764-4.21441993929574	chr7	130642461	130642970	+	0	NA	intron (NM_001081329, intron 1 of 6)	intron (NM_001081329, intron 1 of 6)	1248	NM_001081329	210162	Mm.135397	NM_175435	ENSMUSG00000030757	Zkscan2	9430065N20Rik|AW493225|Zfp694	zinc finger with KRAB and SCAN domains 2	protein-coding
common_peak2-22640-5-12--1.40482005414695-1.62698961692433	chr13	91808169	91808510	+	0	NA	intron (NM_024186, intron 5 of 15)	Lx9|LINE|L1	-72787	NM_028790	74156	Mm.275963	NM_028790	ENSMUSG00000021620	Acot12	1300004O04Rik|4930449F15Rik|AV027244|Cach|mCACH-1	acyl-CoA thioesterase 12	protein-coding
common_peak2-23602-13-6-0.971117108580164-1.01572999746118	chr15	81356680	81357050	+	0	NA	Intergenic	Intergenic	-59779	NM_177821	328572	Mm.258397	NM_177821	ENSMUSG00000055024	Ep300	A430090G16|A730011L11|KAT3B|p300|p300 HAT	E1A binding protein p300	protein-coding
unique_peak2-37985-3-9--1.73591118484664-1.57096726280955	chr6	17142825	17143241	+	0	NA	Intergenic	Intergenic	-4718	NR_102305	319682	Mm.136046	NR_102304	ENSMUSG00000085171	D830026I12Rik	-	RIKEN cDNA D830026I12 gene	ncRNA
common_peak2-21804-9-23--1.39534909431694-1.67711336403294	chr11	118401456	118401896	+	0	NA	intron (NM_001285436, intron 3 of 13)	intron (NM_001285436, intron 3 of 13)	63402	NM_172573	217364	Mm.473963	NM_172573	ENSMUSG00000033857	Engase	C130099A03|D230014K01Rik	endo-beta-N-acetylglucosaminidase	protein-coding
common_peak2-29066-39-50--0.0566640950523416-0.303223439438773	chr5	117318727	117319930	+	0	NA	Intergenic	(TAAA)n|Simple_repeat|Simple_repeat	246674	NM_001122666	71954	Mm.34456	NM_178622	ENSMUSG00000066900	Suds3	2400003N08Rik|2410008L21Rik|AU067672|mSds3	suppressor of defective silencing 3 homolog (S. cerevisiae)	protein-coding
common_peak1-14641-45-36-0.650904659715922-1.42954500397923	chr3	57287582	57288774	+	0	NA	intron (NM_133784, intron 3 of 6)	L1Md_T|LINE|L1	58846	NM_145539	229302	Mm.26618	NM_145539	ENSMUSG00000027801	Tm4sf4	Iltmp	transmembrane 4 superfamily member 4	protein-coding
unique_peak2-38138-9-8-0.0196884049619079-1.03275496310833	chr6	84318891	84319356	+	0	NA	Intergenic	Intergenic	54709	NR_046063	100038556	Mm.387783	NR_046063		Gm10445	ENSMUSG00000072956	predicted gene 10445	ncRNA
common_peak1-8163-19-15-0.402687326661686-0.519193887192487	chr1	194879705	194880487	+	0	NA	Intergenic	Intergenic	-18127	NM_181546	329324	Mm.76710	NM_181546	ENSMUSG00000016200	Syt14	B230320I09Rik|sytXIV	synaptotagmin XIV	protein-coding
common_peak1-14840-35-47--0.153592242258652-0.339646668784	chr3	94581818	94583053	+	0	NA	intron (NM_001037711, intron 2 of 20)	GA-rich|Low_complexity|Low_complexity	8002	NM_001293727	70737	Mm.87634	NM_001037711	ENSMUSG00000068876	Cgn	6330408J11Rik	cingulin	protein-coding
common_peak1-17444-9-12--0.510826311736872-0.394412252720706	chr7	16398673	16399278	+	0	NA	Intergenic	IAPEY3-int|LTR|ERVK	26053	NM_145710	252830	Mm.25863	NM_145710	ENSMUSG00000041583	Obox6	D17Ertd599e	oocyte specific homeobox 6	protein-coding
unique_peak2-37173-5-6--0.511735258063458-0.947717972411649	chr4	46554387	46554828	+	0	NA	intron (NM_178893, intron 11 of 12)	(TGGGGG)n|Simple_repeat|Simple_repeat	-5594	NM_029077	74735	Mm.240252	NM_029077	ENSMUSG00000039853	Trim14	5830400N10Rik|pub	tripartite motif-containing 14	protein-coding
unique_peak2-34686-1-5--2.2120195109379-1.32905871926422	chr15	16403932	16404328	+	0	NA	Intergenic	Lx4B|LINE|L1	-303726	NM_009869	12565	Mm.439758	NM_009869	ENSMUSG00000025370	Cdh9	-	cadherin 9	protein-coding
unique_peak2-38768-3-7--1.41398308995928-1.23214870625617	chr7	125491049	125491453	+	0	NA	Intergenic	Intergenic	95815	NM_138649	110058	Mm.156558	NM_138649	ENSMUSG00000058420	Syt17	Bk	synaptotagmin XVII	protein-coding
common_peak1-19286-10-8-0.186490343566457-1.078512453669	chr9	119981699	119982138	+	0	NA	Intergenic	Intergenic	-4504	NM_009987	13051	Mm.44065	NM_009987	ENSMUSG00000052336	Cx3cr1	-	chemokine (C-X3-C motif) receptor 1	protein-coding
common_peak2-25333-56-54-0.454236111914583-1.04668459253223	chr18	76109757	76111747	+	0	NA	intron (NM_145356, intron 2 of 4)	intron (NM_145356, intron 2 of 4)	130920	NM_145356	207259	Mm.159332	NM_145356	ENSMUSG00000044646	Zbtb7c	B230208J24Rik|Kr-pok|Zbtb36	zinc finger and BTB domain containing 7C	protein-coding
unique_peak2-32623-6-7--0.434601889619698-0.97990265578305	chr1	118399638	118400042	+	0	NA	intron (NM_001077425, intron 19 of 23)	CT-rich|Low_complexity|Low_complexity	818126	NM_001077425	636808	Mm.101576	NM_001077425	ENSMUSG00000070695	Cntnap5a	Caspr5-1|EG636808	contactin associated protein-like 5A	protein-coding
common_peak2-26517-31-36-0.0157853051841732-0.304004708442489	chr2	90904293	90905190	+	0	NA	intron (NM_001290765, intron 6 of 9)	intron (NM_001290765, intron 6 of 9)	5731	NM_026721	68427	Mm.192375	NM_026721	ENSMUSG00000002105	Slc39a13	1100001L14Rik|AA387663|ZIP-13|ZIP13	solute carrier family 39 (metal ion transporter), member 13	protein-coding
common_peak2-21899-46-59--0.00889465235971709-0.302854783871693	chr12	4906805	4907797	+	0	NA	intron (NM_145441, intron 2 of 6)	RLTR12A|LTR|ERVK	7025	NM_145441	217379	Mm.259170	NM_145441	ENSMUSG00000020634	Ubxn2a	6330407P03Rik|Ubxd4	UBX domain protein 2A	protein-coding
common_peak2-20106-9-5-0.604650905683064-1.21398586181642	chr1	160312258	160312618	+	0	NA	intron (NM_001205204, intron 1 of 22)	intron (NM_001205204, intron 1 of 22)	20003	NM_001205204	11899	Mm.329586	NM_007495	ENSMUSG00000026587	Astn1	Astn|GC14|mKIAA0289	astrotactin 1	protein-coding
unique_peak1-4633-12-2-2.06381348436648-2.79529063155376	chr3	84324244	84324902	+	0	NA	intron (NM_001293801, intron 4 of 7)	intron (NM_001293801, intron 4 of 7)	-40212	NM_001033301	229474	Mm.331107	NM_001033301		Fhdc1	6330505N24Rik|Gm126	FH2 domain containing 1	protein-coding
unique_peak2-35753-0-6--3.64748585253182-1.56314192529759	chr18	38856944	38857294	+	0	NA	Intergenic	Intergenic	-96197	NM_011898	24066	Mm.42038	NM_011898	ENSMUSG00000024427	Spry4	A030006O18Rik|sprouty4	sprouty homolog 4 (Drosophila)	protein-coding
common_peak1-7948-16-8-0.948338640825749-1.02063122982878	chr1	153140394	153141204	+	0	NA	Intergenic	Intergenic	-50829	NM_001039512	117198	Mm.33764	NM_028582	ENSMUSG00000023150	Ivns1abp	1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850	influenza virus NS1A binding protein	protein-coding
unique_peak1-432-11-2-1.92373108353046-2.32232533660526	chr1	162224770	162225320	+	0	NA	intron (NM_001038621, intron 2 of 8)	intron (NM_001038621, intron 2 of 8)	56657	NM_001038621	29809	Mm.25833	NM_013862	ENSMUSG00000026721	Rabgap1l	5830411O09Rik|8430421H08Rik|9630005B12Rik|AW049894|HHL|Hh1|mKIAA0471	RAB GTPase activating protein 1-like	protein-coding
common_peak1-12088-48-73--0.238526214394136-0.460841271984764	chr17	24719363	24720818	+	0	NA	intron (NM_013630, intron 26 of 45)	L1_Mus3|LINE|L1	33195	NM_013630	18763	Mm.30435	NM_013630	ENSMUSG00000032855	Pkd1	PC1|mFLJ00285	polycystic kidney disease 1 homolog	protein-coding
unique_peak1-4096-11-3-1.50869358425161-1.95434855131066	chr2	72785955	72786461	+	0	NA	intron (NM_001098425, intron 2 of 4)	intron (NM_001098425, intron 2 of 4)	31130	NM_001098425	20687	Mm.124328	NM_011450	ENSMUSG00000027109	Sp3	D130027J01Rik	trans-acting transcription factor 3	protein-coding
unique_peak1-4385-5-0-2.29561966399415-1.80617997398389	chr2	163542354	163542804	+	0	NA	intron (NM_001164053, intron 2 of 3)	intron (NM_001164053, intron 2 of 3)	22806	NM_011106	18769	Mm.10091	NM_011106	ENSMUSG00000035268	Pkig	PKIgamma	protein kinase inhibitor, gamma	protein-coding
common_peak2-29938-45-60--0.070379312218015-0.308391271559909	chr6	116005950	116007320	+	0	NA	intron (NM_177412, intron 3 of 5)	intron (NM_177412, intron 3 of 5)	-61612	NM_026376	67784	Mm.3085	NM_026376	ENSMUSG00000030123	Plxnd1	6230425C21Rik|b2b1863Clo|b2b553Clo	plexin D1	protein-coding
common_peak1-8642-130-281--0.447620269568932-2.74713214527326	chr10	122985093	122986900	+	0	NA	intron (NM_182807, intron 2 of 5)	(TTCTC)n|Simple_repeat|Simple_repeat	284864	NM_001252387	268354	Mm.51939	NM_182807	ENSMUSG00000044071	Fam19a2	6330575M02|FAM19A2 TAFA-2|TAFA2|Tafa-2	family with sequence similarity 19, member A2	protein-coding
common_peak1-14076-12-4-1.32684789020028-2.04196296489515	chr2	121170154	121170774	+	0	NA	intron (NM_178795, intron 9 of 29)	PB1D9|SINE|Alu	6285	NM_178795	327655	Mm.386076	NM_178795	ENSMUSG00000033526	Ppip5k1	B430315C20Rik|Hisppd2a|mKIAA0377	diphosphoinositol pentakisphosphate kinase 1	protein-coding
unique_peak1-1060-9-1-2.18961340640422-2.31132995230379	chr11	81371914	81372373	+	0	NA	intron (NM_001034013, intron 1 of 9)	intron (NM_001034013, intron 1 of 9)	14898	NM_001033765	237880	Mm.435528	NM_001033765		1700071K01Rik	-	RIKEN cDNA 1700071K01 gene	protein-coding
unique_peak2-39645-10-8-0.186490343566457-1.078512453669	chr9	106198926	106199354	+	0	NA	intron (NM_027354, intron 7 of 10)	intron (NM_027354, intron 7 of 10)	15748	NM_027354	70235	Mm.23054	NM_027354	ENSMUSG00000023345	Poc1a	2510040D07Rik|Wdr51a	POC1 centriolar protein homolog A (Chlamydomonas)	protein-coding
common_peak2-30257-11-8-0.338768582809301-1.14218153353838	chr7	12949890	12950336	+	0	NA	Intergenic	Intergenic	-2000	NM_134233	171267	Mm.434341	NM_134233	ENSMUSG00000066803	Vmn1r84	V1rg11	vomeronasal 1 receptor 84	protein-coding
unique_peak2-32744-7-5-0.214128329577033-1.01466476204226	chr1	166702398	166702801	+	0	NA	Intergenic	Intergenic	-24264	NM_019759	56429	Mm.28935	NM_019759	ENSMUSG00000026574	Dpt	1810032B19Rik|5033416F05Rik|EQ-1|Eq1	dermatopontin	protein-coding
unique_peak2-33337-2-7--1.91745425626332-1.45399745587252	chr11	20542784	20543156	+	0	NA	intron (NM_001038625, intron 1 of 1)	intron (NM_001038625, intron 1 of 1)	10990	NM_001038625	58172	Mm.339676	NM_021372	ENSMUSG00000049800	Sertad2	AB041541|AU021878|Kiaa0127|SEI-2|Sei2|TRIP-Br2|mKIAA0127	SERTA domain containing 2	protein-coding
unique_peak1-5555-8-2-1.42025991722641-1.65811743852845	chr5	144898869	144899382	+	0	NA	intron (NM_001081109, intron 3 of 13)	intron (NM_001081109, intron 3 of 13)	37820	NM_001081109	231876	Mm.288726	NM_001081109	ENSMUSG00000038970	Lmtk2	2900041G10Rik|A330101P12Rik|BREK|KPI-2|KPI2|aatyk2|cprk	lemur tyrosine kinase 2	protein-coding
common_peak2-27556-7-12--0.901348887842903-1.31827279259406	chr3	96593592	96594131	+	0	NA	exon (NM_026406, exon 9 of 9)	exon (NM_026406, exon 9 of 9)	24583	NM_018767	54215	Mm.34693	NM_018767	ENSMUSG00000038304	Cd160	AU045688|By55	CD160 antigen	protein-coding
common_peak2-32155-48-86--0.472016344613913-1.07506677869082	chr9	108516547	108518198	+	0	NA	exon (NM_011790, exon 7 of 16)	exon (NM_011790, exon 7 of 16)	-17441	NM_028944	74443	Mm.226534	NM_028944	ENSMUSG00000006675	P4htm	4933406E20Rik|AI853847|BB128974|Ph-4	prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)	protein-coding
unique_peak2-38183-2-8--2.08737925770563-1.65811743852845	chr6	94681826	94682166	+	0	NA	Intergenic	L1M4|LINE|L1	-31857	NM_008377	16206	Mm.245210	NM_008377	ENSMUSG00000030029	Lrig1	D6Bwg0781e|Img|LIG-1	leucine-rich repeats and immunoglobulin-like domains 1	protein-coding
common_peak1-8307-89-97-0.420256910710794-1.40612184567901	chr10	40256977	40258850	+	0	NA	Intergenic	Intergenic	-32255	NM_027572	70840	Mm.332570	NM_027572	ENSMUSG00000019834	Slc22a16	4921504E14Rik|CT2|FLIPT2|OCT6|OKB1	solute carrier family 22 (organic cation transporter), member 16	protein-coding
common_peak2-30511-20-27--0.319280137466411-0.412012472183092	chr7	65481515	65482306	+	0	NA	Intergenic	L1MD2|LINE|L1	-431662	NM_009728	11982	Mm.135129	NM_009728	ENSMUSG00000025324	Atp10a	Atp10c|pfatp	ATPase, class V, type 10A	protein-coding
common_peak2-32126-13-24--0.865384159136956-0.879255460030357	chr9	105494351	105495091	+	0	NA	Intergenic	Intergenic	-50604	NM_001081309	75669	Mm.274830	NM_029380	ENSMUSG00000032571	Pik3r4	2210010O15Rik|C730038E05Rik|C85833|D9Ertd418e	phosphatidylinositol 3 kinase, regulatory subunit, polypeptide 4, p150	protein-coding
common_peak2-29456-30-36--0.039777956137077-0.301029995663973	chr6	25808726	25809888	+	0	NA	Intergenic	Lx5|LINE|L1	-50081	NM_133931	101185	Mm.274589	NM_133931	ENSMUSG00000029676	Pot1a	1500031H18Rik|AI851169|Pot1	protection of telomeres 1A	protein-coding
common_peak2-31868-55-95--0.380342629568454-0.869135945698768	chr9	53666427	53667569	+	0	NA	Intergenic	Intergenic	-31060	NM_025540	66402	Mm.29132	NM_025540	ENSMUSG00000042045	Sln	2310045A07Rik	sarcolipin	protein-coding
unique_peak2-35286-3-12--2.11442280810037-2.15846853396659	chr17	6492855	6493273	+	0	NA	Intergenic	Intergenic	-42922	NR_033520	547127	Mm.297552	NM_001045538		Tmem181b-ps	Tmem181b	transmembrane protein 181B, pseudogene	pseudo
common_peak2-28407-20-28--0.369906210536379-0.457753417732779	chr4	141286540	141287097	+	0	NA	Intergenic	Intergenic	-7484	NM_001017966	68817	Mm.393721	NM_001017966		Ddi2	1110056G13Rik|1700027M01Rik|9130022E05Rik|AI604911|AU040698	DNA-damage inducible protein 2	protein-coding
unique_peak2-33098-5-14--1.61127093161437-1.95509489018123	chr10	80589721	80590346	+	0	NA	Intergenic	Intergenic	-8983	NM_010731	16969	Mm.20920	NM_010731	ENSMUSG00000035011	Zbtb7a	9030619K07Rik|9130006G12Rik|AI452336|FBI-1|Lrf|Pokemon|Zbtb7	zinc finger and BTB domain containing 7a	protein-coding
unique_peak1-7421-6-4-0.24347001549294-0.989110657569874	chrX	151017674	151018100	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-4014	NM_001037167	434881	Mm.357614	NM_001037167	ENSMUSG00000072888	Samt2	EG434881|Gm5647	spermatogenesis associated multipass transmembrane protein 2	protein-coding
common_peak2-25035-14-4-1.57728806547028-2.4322161449009	chr18	25711471	25711847	+	0	NA	intron (NM_001146294, intron 2 of 12)	intron (NM_001146294, intron 2 of 12)	200825	NM_133195	108013	Mm.266435	NM_133195	ENSMUSG00000024268	Celf4	A230070D14Rik|BRUNOL-4|Brul4|Brunol4|C130060B05Rik	CUGBP, Elav-like family member 4	protein-coding
unique_peak1-6538-8-0-3.00522241794757-2.70926996097583	chr7	126585271	126585788	+	0	NA	TTS (NM_025989)	TTS (NM_025989)	17257	NM_025989	67133	Mm.46403	NM_025989	ENSMUSG00000030954	Gp2	2310037I18Rik|AV060639	glycoprotein 2 (zymogen granule membrane)	protein-coding
unique_peak1-1620-14-5-1.31425365963649-1.4372489031793	chr13	41663593	41664372	+	0	NA	Intergenic	Intergenic	-37603	NM_001163572	621976	Mm.259830	NM_001163572	ENSMUSG00000087370	Tmem170b	EG621976	transmembrane protein 170B	protein-coding
unique_peak1-957-13-6-0.971117108580164-1.01572999746118	chr11	60071974	60072511	+	0	NA	intron (NM_153080, intron 7 of 14)	intron (NM_153080, intron 7 of 14)	-38136	NM_011480	20787	Mm.278701	NM_011480	ENSMUSG00000020538	Srebf1	ADD-1|ADD1|D630008H06|SREBP-1|SREBP-1a|SREBP-1c|SREBP1|SREBP1c|bHLHd1	sterol regulatory element binding transcription factor 1	protein-coding
common_peak1-18330-13-24--0.865384159136956-0.879255460030357	chr8	61223626	61224221	+	0	NA	intron (NM_175032, intron 1 of 11)	L1Md_T|LINE|L1	-44330	NM_001177534	100271928	Mm.484123	NM_001177534		Gm15881	OTTMUSG00000027193	predicted gene 15881	protein-coding
common_peak1-16247-24-12-1.09277018462662-1.73042999925837	chr5	104406519	104407547	+	0	NA	promoter-TSS (NM_001163486)	promoter-TSS (NM_001163486)	-626	NM_001163486	243168	Mm.284944	NM_198030	ENSMUSG00000034528	Hsd17b13	AI047820|PAN1B-like|Pan1b	hydroxysteroid (17-beta) dehydrogenase 13	protein-coding
common_peak2-31662-13-16--0.30899081061257-0.330004445983672	chr8	126616164	126616800	+	0	NA	Intergenic	ORR1A1-int|LTR|MaLR	69109	NM_001029876	382038	Mm.334891	NM_001029876	ENSMUSG00000031976	Urb2	C77575|mKIAA0133	URB2 ribosome biogenesis 2 homolog (S. cerevisiae)	protein-coding
unique_peak2-38996-2-6--1.72480917832092-1.26211192963361	chr8	46471220	46471505	+	0	NA	Intergenic	Intergenic	-3717	NM_153535	212326	Mm.51259	NM_153535	ENSMUSG00000070044	Fam149a	AW213256|mKIAA4166	family with sequence similarity 149, member A	protein-coding
unique_peak2-37791-6-14--1.34149248522822-1.01572999746118	chr5	121819511	121820322	+	0	NA	Intergenic	Intergenic	15708	NM_001163470	231712	Mm.20488	NM_172275	ENSMUSG00000042726	Trafd1	1110008K06Rik|Fln29	TRAF type zinc finger domain containing 1	protein-coding
unique_peak1-3445-11-3-1.50869358425161-1.95434855131066	chr19	7320094	7320678	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-4674	NM_027643	70999	Mm.329605	NM_027643	ENSMUSG00000024764	Naa40	4931433E08Rik|AU023197|Nat11	N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae)	protein-coding
common_peak2-29193-32-45--0.244469936837353-0.394172396164276	chr5	135956613	135958343	+	0	NA	intron (NM_146001, intron 1 of 30)	intron (NM_146001, intron 1 of 30)	63514	NM_146001	215114	Mm.280805	NM_146001	ENSMUSG00000039959	Hip1	2610109B09Rik|A930014B11Rik|E130315I21Rik|mKIAA4113	huntingtin interacting protein 1	protein-coding
unique_peak2-35400-14-38--1.3861860585046-2.54214423428716	chr17	32035750	32036966	+	0	NA	Intergenic	Intergenic	-43621	NM_010831	17691	Mm.290941	NM_010831	ENSMUSG00000024042	Sik1	Msk|Sik|Snf1lk	salt inducible kinase 1	protein-coding
unique_peak2-34623-5-7--0.704380336005853-1.01466476204226	chr14	76610434	76610720	+	0	NA	Intergenic	ORR1B2|LTR|MaLR	99879	NM_013745	27275	Mm.21138	NM_013745	ENSMUSG00000022009	Nufip1	Nufip	nuclear fragile X mental retardation protein interacting protein 1	protein-coding
common_peak1-19069-17-25--0.482143379936054-0.479250674391597	chr9	70012475	70013268	+	0	NA	Intergenic	Intergenic	-23507	NM_029784	76886	Mm.44355	NM_029784	ENSMUSG00000032224	Fam81a	6430514L14Rik	family with sequence similarity 81, member A	protein-coding
common_peak2-30504-28-44--0.438893976508212-0.643431604871956	chr7	64872023	64873222	+	0	NA	intron (NM_008071, intron 3 of 8)	B4|SINE|B4	26079	NM_008071	14402	Mm.8004	NM_008071	ENSMUSG00000033676	Gabrb3	A230092K12Rik|AW049585|Cp1|Gabrb-3|beta3	gamma-aminobutyric acid (GABA) A receptor, subunit beta 3	protein-coding
unique_peak2-33207-7-32--2.24530328906026-4.07016573886258	chr10	111996087	111997321	+	0	NA	Intergenic	Lx9|LINE|L1	-167278	NR_040579	69355	Mm.84337	NR_040579		1700010J16Rik	-	RIKEN cDNA 1700010J16 gene	ncRNA
common_peak1-17134-72-90-0.160789172673621-0.463996621321663	chr6	115675840	115677371	+	0	NA	Intergenic	B4A|SINE|B4	8364	NM_001168259	94346	Mm.29739	NM_144805	ENSMUSG00000059900	Tmem40	9030407H20Rik|AV091463|W64236	transmembrane protein 40	protein-coding
common_peak1-7888-20-26--0.266812717572275-0.373496418836697	chr1	134455284	134456074	+	0	NA	Intergenic	Intergenic	-16162	NM_177129	21367	Mm.260861	NM_011531	ENSMUSG00000053024	Cntn2	D130012K04Rik|TAG-1|Tax	contactin 2	protein-coding
common_peak1-17588-10-7-0.356415345008769-1.12966497611638	chr7	42692957	42693482	+	0	NA	Intergenic	Intergenic	-3380007	NM_001013810	434171	Mm.60990	NM_001013810	ENSMUSG00000060565	Gm5591	EG434171	predicted gene 5591	protein-coding
common_peak1-18531-20-10-1.0286431659539-1.30248952876293	chr8	94354266	94354972	+	0	NA	Intergenic	Intergenic	-29066	NM_008393	16373	Mm.238044	NM_008393	ENSMUSG00000031734	Irx3	AI894186	Iroquois related homeobox 3	protein-coding
common_peak1-17681-13-10-0.319040412000471-0.446472590016315	chr7	66451453	66452061	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	-32363	NM_173010	22215	Mm.9002	NM_011668	ENSMUSG00000025326	Ube3a	4732496B02|5830462N02Rik|A130086L21Rik|Hpve6a|mKIAA4216	ubiquitin protein ligase E3A	protein-coding
unique_peak1-7280-10-2-1.77145284428761-2.09384600808989	chr9	102720692	102721265	+	0	NA	Intergenic	LTR85b|LTR|Gypsy?	-16272	NM_013649	20187	Mm.335391	NM_013649	ENSMUSG00000032547	Ryk	AW536699|ERK-3|Vik	receptor-like tyrosine kinase	protein-coding
unique_peak2-34535-2-6--1.72480917832092-1.26211192963361	chr14	55590606	55590905	+	0	NA	intron (NM_080728, intron 38 of 40)	PB1D10|SINE|Alu	3131	NR_033497	791403	Mm.319176	NR_033497	ENSMUSG00000097652	D830015G02Rik	ENSMUSG00000053118	RIKEN cDNA D830015G02 gene	ncRNA
common_peak1-10360-20-13-0.680719862533589-0.809260849721102	chr13	90234262	90235048	+	0	NA	intron (NM_025335, intron 1 of 3)	URR1A|DNA|MER1_type	5383	NM_025335	66074	Mm.241387	NM_025335		Tmem167	0610041E09Rik|5730424F14Rik|AU041184|AW537806|ENSMUSG00000060669|Gm10085|Tmem167a	transmembrane protein 167	protein-coding
common_peak1-12015-7-3-0.799090830298189-1.23214870625617	chr17	15085055	15085570	+	0	NA	non-coding (NR_027905, exon 1 of 1)	non-coding (NR_027905, exon 1 of 1)	516	NR_027905	106740	Mm.475379	NR_027905		LOC106740	-	uncharacterized LOC106740	ncRNA
common_peak1-14578-40-49-0.0151194929763738-0.309716464454027	chr3	40744856	40746279	+	0	NA	Intergenic	PB1D10|SINE|Alu	-8986	NM_001040399	214048	Mm.46782	NM_027663	ENSMUSG00000037814	Larp1b	1700108L22Rik|4933421B21Rik|AA690246|Larp2	La ribonucleoprotein domain family, member 1B	protein-coding
common_peak1-18618-69-83-0.202825024479972-0.537718187625393	chr8	108713770	108715581	+	0	NA	intron (NM_178798, intron 3 of 9)	ID2|SINE|ID	20158	NM_001007567	66432	Mm.269029	NM_001007567	ENSMUSG00000033106	Slc7a6os	2010007L18Rik|2400002F02Rik	solute carrier family 7, member 6 opposite strand	protein-coding
common_peak1-13242-86-87-0.516204175395056-1.8604272022736	chr19	29521540	29523688	+	0	NA	intron (NM_021396, intron 4 of 5)	RLTR14-int|LTR|ERV1	37205	NM_021396	58205	Mm.116737	NM_021396		Pdcd1lg2	B7-DC|Btdc|F730015O22Rik|PD-L2	programmed cell death 1 ligand 2	protein-coding
unique_peak1-6061-8-0-3.00522241794757-2.70926996097583	chr6	116355966	116356491	+	0	NA	exon (NM_027920, exon 7 of 7)	exon (NM_027920, exon 7 of 7)	54968	NM_009662	11689	Mm.41072	NM_009662	ENSMUSG00000025701	Alox5	5-LO|5-LOX|5LO|5LX|AI850497|F730011J02	arachidonate 5-lipoxygenase	protein-coding
common_peak1-12893-21-13-0.762134343208631-1.0220094258199	chr18	81033131	81034018	+	0	NA	intron (NM_001201569, intron 10 of 29)	intron (NM_001201569, intron 10 of 29)	97223	NM_001201569	50771	Mm.247138	NM_015805	ENSMUSG00000024566	Atp9b	AA934181|Atpc2b|IIb|MMR	ATPase, class II, type 9B	protein-coding
unique_peak2-35409-3-20--2.80630051273804-3.35694334496952	chr17	33289293	33290086	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-13061	NM_177719	240069	Mm.157765	NM_177719	ENSMUSG00000048602	Morc2b	4932411A10Rik|Tce6	microrchidia 2B	protein-coding
common_peak1-9743-29-21-0.652858461977813-1.06916698217164	chr12	49389556	49390748	+	0	NA	Intergenic	Lx6|LINE|L1	-1093718	NM_001160112	15228	Mm.4704	NM_008241	ENSMUSG00000020950	Foxg1	2900064B05Rik|BF-1|Bf1|Hfh9|Hfhbf1	forkhead box G1	protein-coding
unique_peak2-34086-4-5--0.608423014574403-0.909929411522249	chr13	9061275	9061645	+	0	NA	Intergenic	Intergenic	-31691	NM_172585	217980	Mm.234944	NM_172585	ENSMUSG00000033499	Larp4b	A630096F19|AI256361|D13Wsu64e|Larp5	La ribonucleoprotein domain family, member 4B	protein-coding
common_peak2-28313-14-9-0.577288065470282-0.630231561310125	chr4	133338661	133339233	+	0	NA	Intergenic	MTD|LTR|MaLR	-29421	NM_001080819	93760	Mm.22478	NM_001080819	ENSMUSG00000007880	Arid1a	1110030E03Rik|BAF250a|Osa1|Smarcf1	AT rich interactive domain 1A (SWI-like)	protein-coding
common_peak1-11625-16-8-0.948338640825749-1.02063122982878	chr16	20476518	20477259	+	0	NA	Intergenic	Intergenic	-22002	NM_172265	224045	Mm.233855	NM_172265	ENSMUSG00000003235	Eif2b5	C81315	eukaryotic translation initiation factor 2B, subunit 5 epsilon	protein-coding
unique_peak2-33071-1-5--2.2120195109379-1.32905871926422	chr10	79703972	79704293	+	0	NA	intron (NM_023431, intron 12 of 13)	intron (NM_023431, intron 12 of 13)	-8065	NM_029272	75406	Mm.28712	NM_029272	ENSMUSG00000020153	Ndufs7	1010001M04Rik	NADH dehydrogenase (ubiquinone) Fe-S protein 7	protein-coding
common_peak1-9128-31-41--0.167078751965637-0.345592563585011	chr11	75486653	75487740	+	0	NA	3' UTR (NM_008659, exon 32 of 32)	3' UTR (NM_008659, exon 32 of 32)	-5565	NM_001277219	12928	Mm.280125	NM_133656		Crk	Crk-I|Crk-II|Crk-III|Crk3|CrkIII|Crko|c-Crk|p38	v-crk sarcoma virus CT10 oncogene homolog (avian)	protein-coding
unique_peak2-39426-0-6--3.64748585253182-1.56314192529759	chr9	43085465	43085830	+	0	NA	intron (NM_001243261, intron 2 of 2)	MT2B|LTR|ERVL	17685	NM_001243261	235302	Mm.135745	NM_001243261	ENSMUSG00000095385	D630033O11Rik	Gm588	RIKEN cDNA D630033O11 gene	protein-coding
unique_peak2-38132-3-7--1.41398308995928-1.23214870625617	chr6	83422076	83422505	+	0	NA	Intergenic	Intergenic	30541	NR_028382	320775	Mm.434334	NR_028382	ENSMUSG00000051844	B230319C09Rik	-	RIKEN cDNA B230319C09 gene	ncRNA
unique_peak1-7160-8-2-1.42025991722641-1.65811743852845	chr9	58315097	58315653	+	0	NA	intron (NR_040736, intron 2 of 2)	intron (NR_040736, intron 2 of 2)	12395	NR_040736	74879	Mm.416924	NR_040736	ENSMUSG00000097651	4930461G14Rik	-	RIKEN cDNA 4930461G14 gene	ncRNA
common_peak2-25548-8-12--0.695217300193522-0.475924844171029	chr19	6118853	6119354	+	0	NA	promoter-TSS (NM_133678)	promoter-TSS (NM_133678)	-517	NM_133678	66406	Mm.303924	NM_133678	ENSMUSG00000024790	Sac3d1	2410004C24Rik|AU015683|shd1	SAC3 domain containing 1	protein-coding
common_peak2-22079-11-11--0.0762689164695427-0.301029995663976	chr12	76837802	76838319	+	0	NA	Intergenic	Intergenic	-1344	NM_030750	81535	Mm.280199	NM_030750	ENSMUSG00000021054	Sgpp1	AI463453|SPP|SPP1|Spph1	sphingosine-1-phosphate phosphatase 1	protein-coding
unique_peak1-4295-11-4-1.18676548936425-1.68134727924692	chr2	145841643	145842292	+	0	NA	Intergenic	Intergenic	81447	NM_175280	78774	Mm.136347	NM_175280	ENSMUSG00000037143	Cfap61	4930529M08Rik|BB178539|BC024760	cilia and flagella associated protein 61	protein-coding
common_peak1-13648-12-10-0.189344366450341-0.386243247519795	chr2	26352322	26352925	+	0	NA	intron (NM_008714, intron 2 of 33)	intron (NM_008714, intron 2 of 33)	6719	NM_008714	18128	Mm.290610	NM_008714	ENSMUSG00000026923	Notch1	9930111A19Rik|Mis6|N1|Tan1|lin-12	notch 1	protein-coding
common_peak1-15501-11-9-0.186765489364251-0.344532117358383	chr4	115827961	115828575	+	0	NA	intron (NM_001290658, intron 13 of 20)	intron (NM_001290658, intron 13 of 20)	4232	NM_001290658	68273	Mm.196045	NM_026651	ENSMUSG00000028700	Pomgnt1	0610016I07Rik|4930467B06Rik	protein O-linked mannose beta 1,2-N-acetylglucosaminyltransferase	protein-coding
common_peak1-17105-16-19--0.203664452619301-0.325169893479371	chr6	113604482	113605204	+	0	NA	intron (NM_001113553, intron 2 of 11)	ID_B1|SINE|B4	16382	NM_001113553	108960	Mm.152142	NM_172161	ENSMUSG00000060477	Irak2	6330415L08Rik|AI649099|IRAK-2	interleukin-1 receptor-associated kinase 2	protein-coding
common_peak2-22340-33-43--0.128094056111768-0.324581211600972	chr13	23621544	23622551	+	0	NA	promoter-TSS (NM_153173)	promoter-TSS (NM_153173)	-866	NM_153173	69386	Mm.158272	NM_153173	ENSMUSG00000060981	Hist1h4h	1700024H08Rik	histone cluster 1, H4h	protein-coding
common_peak2-30669-9-8-0.0196884049619079-1.03275496310833	chr7	101964240	101964775	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-1394640	NM_011858	23966	Mm.254610	NM_011858	ENSMUSG00000048078	Tenm4	Doc4|ELM2|Odz4|R75022|Ten-m4|l(7)-3Rn|l7Rn3|mKIAA1302	teneurin transmembrane protein 4	protein-coding
common_peak1-10265-69-67-0.507679606008393-1.49942820951552	chr13	55692676	55693980	+	0	NA	Intergenic	RMER17C|LTR|ERVK	-1168	NM_026211	67511	Mm.45233	NM_026211	ENSMUSG00000058569	Tmed9	2400003B06Rik	transmembrane emp24 protein transport domain containing 9	protein-coding
common_peak2-24244-32-33-0.191629177969321-0.409729630423047	chr16	91043697	91044602	+	0	NA	intron (NM_026110, intron 1 of 17)	CpG	475	NM_026110	67367	Mm.347	NM_026110	ENSMUSG00000022974	Paxbp1	1810007M14Rik|C21orf66|Gcfc|Gcfc1|Pax3/7bp	PAX3 and PAX7 binding protein 1	protein-coding
common_peak1-12999-13-6-0.971117108580164-1.01572999746118	chr19	4441851	4442454	+	0	NA	intron (NR_045989, intron 1 of 4)	intron (NR_045989, intron 1 of 4)	2593	NR_045989	319314	Mm.393810	NR_045989	ENSMUSG00000087132	A930001C03Rik	-	RIKEN cDNA A930001C03 gene	ncRNA
common_peak1-16841-12-20--0.743541437691122-0.625923329873571	chr6	52639831	52640535	+	0	NA	Intergenic	PB1D10|SINE|Alu	-23540	NM_025816	52440	Mm.389757	NM_025816	ENSMUSG00000004535	Tax1bp1	1200003J11Rik|1700069J21Rik|AA930106|D6Ertd404e|D6Ertd772e|T6bp|TXBP151	Tax1 (human T cell leukemia virus type I) binding protein 1	protein-coding
common_peak2-19790-10-16--0.73104749624157-0.604422558181019	chr1	86470910	86471440	+	0	NA	Intergenic	Intergenic	1024210	NM_030194	109032	Mm.335802	NM_030194	ENSMUSG00000070034	Sp110	5031415C07Rik|52kDa|5830484A20Rik|ENSMUSG00000075603|Ifi75|Ipr1	Sp110 nuclear body protein	protein-coding
common_peak2-32294-20-24--0.155781405183531-0.319918318021793	chrX	37701206	37702238	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-484941	NM_001191032	100504400	Mm.373409	NM_001191032	ENSMUSG00000095240	Cypt14	-	cysteine-rich perinuclear theca 14	protein-coding
common_peak1-16866-12-10-0.189344366450341-0.386243247519795	chr6	56924211	56924673	+	0	NA	Intergenic	Intergenic	-10894	NM_134174	171192	Mm.377172	NM_134174	ENSMUSG00000090346	Vmn1r5	V1rc19	vomeronasal 1 receptor 5	protein-coding
common_peak2-19663-11-7-0.508693584251613-1.21681515183528	chr1	53797611	53798121	+	0	NA	Intergenic	Intergenic	-34238	NM_001252070	627872	Mm.184692	NM_001252070	ENSMUSG00000096141	Dnah7a	Dnahc7|Dnahc7a|Gm992	dynein, axonemal, heavy chain 7A	protein-coding
common_peak2-30900-15-9-0.690236655668294-0.732381977911291	chr7	142470229	142470783	+	0	NA	Intergenic	Intergenic	10204	NM_001163611	100043254	Mm.192092	NM_001163611	ENSMUSG00000073804	Nps	ENSMUSG00000073804	neuropeptide S	protein-coding
unique_peak1-6395-7-4-0.477162735410827-1.09384600808989	chr7	79312648	79313105	+	0	NA	intron (NM_001024703, intron 14 of 22)	intron (NM_001024703, intron 14 of 22)	138605	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding
unique_peak2-33185-4-10--1.48289213249054-1.5150158574804	chr10	96628592	96629001	+	0	NA	Intergenic	L1MC1|LINE|L1	130394	NR_045358	75301	Mm.108650	NR_045358		4930556N09Rik	-	RIKEN cDNA 4930556N09 gene	ncRNA
unique_peak1-1073-7-3-0.799090830298189-1.23214870625617	chr11	85789887	85790403	+	0	NA	Intergenic	Intergenic	47707	NR_046030	629393	Mm.372867	NR_046030		Gm20759	-	predicted gene, 20759	ncRNA
common_peak2-26444-11-8-0.338768582809301-1.14218153353838	chr2	70662380	70662789	+	0	NA	intron (NM_172664, intron 1 of 19)	intron (NM_172664, intron 1 of 19)	953	NM_172664	228012	Mm.136511	NM_172664	ENSMUSG00000041997	Tlk1	4930545J15Rik	tousled-like kinase 1	protein-coding
unique_peak2-39753-5-7--0.704380336005853-1.01466476204226	chrX	18071392	18071713	+	0	NA	Intergenic	Lx9|LINE|L1	-33152	NM_175228	75905	Mm.159617	NM_175228	ENSMUSG00000037358	4930578C19Rik	-	RIKEN cDNA 4930578C19 gene	protein-coding
common_peak1-14456-40-25-0.958535964610006-2.27205585058211	chr3	27606540	27608100	+	0	NA	intron (NM_173182, intron 1 of 25)	intron (NM_173182, intron 1 of 25)	2041	NM_173182	72007	Mm.38832	NM_173182	ENSMUSG00000039286	Fndc3b	1600019O04Rik|AW550168|Fad104|mKIAA4164	fibronectin type III domain containing 3B	protein-coding
common_peak2-25841-26-15-0.927899092158462-1.40782320807777	chr19	41474919	41475431	+	0	NA	Intergenic	RLTR14|LTR|ERV1	-15615	NM_031376	83490	Mm.222266	NM_031376	ENSMUSG00000025017	Pik3ap1	1810044J04Rik|BCAP	phosphoinositide-3-kinase adaptor protein 1	protein-coding
common_peak2-29845-19-19-0.0807592317743238-0.322753776620787	chr6	97210843	97211463	+	0	NA	Intergenic	B1_Mur3|SINE|Alu	-8379	NM_001081157	320502	Mm.68163	NM_001081157	ENSMUSG00000044086	Lmod3	5430424A14Rik	leiomodin 3 (fetal)	protein-coding
unique_peak2-36539-1-5--2.2120195109379-1.32905871926422	chr2	164804295	164804717	+	0	NA	intron (NM_020333, intron 6 of 25)	intron (NM_020333, intron 6 of 25)	11018	NM_020333	57138	Mm.252987	NM_020333	ENSMUSG00000017740	Slc12a5	KCC2|mKIAA1176	solute carrier family 12, member 5	protein-coding
common_peak1-17545-11-7-0.508693584251613-1.21681515183528	chr7	29471387	29471852	+	0	NA	Intergenic	MERVL_2A-int|LTR|ERVL	-6249	NM_207238	233040	Mm.116116	NM_207238	ENSMUSG00000037463	Fbxo27	E130008B10Rik|FBG5|Gm161	F-box protein 27	protein-coding
unique_peak1-6334-9-6-0.382258484346616-1.11707584880836	chr7	47072252	47072770	+	0	NA	Intergenic	RMER10A|LTR|ERVL	299375	NM_001004139	70227	Mm.333800	NM_001004139	ENSMUSG00000068959	Zfp619	3000002G13Rik	zinc finger protein 619	protein-coding
common_peak2-21315-11-7-0.508693584251613-1.21681515183528	chr11	74954863	74955293	+	0	NA	intron (NM_001002764, intron 14 of 18)	intron (NM_001002764, intron 14 of 18)	26576	NM_001098203	15248	Mm.57250	NM_010430	ENSMUSG00000043099	Hic1	AA408311|HIC-1	hypermethylated in cancer 1	protein-coding
common_peak2-30105-15-9-0.690236655668294-0.732381977911291	chr6	135291398	135291734	+	0	NA	Intergenic	Intergenic	-21383	NM_010128	13730	Mm.182785	NM_010128	ENSMUSG00000030208	Emp1	I-8-09|TMP	epithelial membrane protein 1	protein-coding
common_peak1-15881-18-23--0.272043349492805-0.34651636097721	chr5	8659935	8660954	+	0	NA	intron (NM_011076, intron 1 of 27)	CpG	352	NM_011076	18671	Mm.207354	NM_011076	ENSMUSG00000040584	Abcb1a	Abcb4|Evi32|Mdr1a|Mdr3|P-gp|Pgp|Pgy-3|Pgy3|mdr-3	ATP-binding cassette, sub-family B (MDR/TAP), member 1A	protein-coding
common_peak2-24035-11-6-0.701338662194009-1.32595962126035	chr16	24205558	24205998	+	0	NA	Intergenic	Intergenic	-187658	NM_178665	210126	Mm.209385	NM_178665	ENSMUSG00000033306	Lpp	9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16	LIM domain containing preferred translocation partner in lipoma	protein-coding
common_peak2-30945-61-71-0.212824328307028-0.504282745370237	chr8	22592999	22594800	+	0	NA	Intergenic	L1VL1|LINE|L1	-25831	NM_183268	68009	Mm.327348	NM_183268	ENSMUSG00000095066	Defa20	2010016F14Rik|Defcr20	defensin, alpha, 20	protein-coding
unique_peak1-4870-11-1-2.50869358425161-2.83420869758413	chr4	11757565	11758081	+	0	NA	Intergenic	Intergenic	72519	NM_019753	12557	Mm.33402	NM_019753	ENSMUSG00000028217	Cdh17	HPT-1|HPT-1/LI	cadherin 17	protein-coding
common_peak1-14700-56-141--0.914151294065439-4.75098844926886	chr3	69044028	69045927	+	0	NA	Intergenic	Intergenic	18636	NM_027843	71619	Mm.98122	NM_027843	ENSMUSG00000098207	Arl14	9130014L17Rik|Arf7	ADP-ribosylation factor-like 14	protein-coding
common_peak1-8449-9-11--0.395349094316936-0.344532117358383	chr10	79840250	79840772	+	0	NA	Intergenic	Intergenic	9885	NM_198615	237400	Mm.268389	NM_198615	ENSMUSG00000048696	Mex3d	BC059858|Rkhd1	mex3 homolog D (C. elegans)	protein-coding
common_peak1-16798-99-111-0.412002821225047-1.51136303463421	chr6	43265033	43266973	+	0	NA	Intergenic	PB1D10|SINE|Alu	-6450	NM_130869	18291	Mm.17715	NM_130869	ENSMUSG00000029736	Nobox	OG2|Og2x	NOBOX oogenesis homeobox	protein-coding
unique_peak2-38950-1-4--1.94898510510411-1.10720996964787	chr8	27173857	27174264	+	0	NA	intron (NM_207659, intron 13 of 21)	RLTR13D6|LTR|ERVK	-19021	NR_110583	76604	Mm.437190	NR_110583		1700047A11Rik	4930554C15Rik	RIKEN cDNA 1700047A11 gene	ncRNA
common_peak2-31029-13-11-0.193509529916613-0.379391706698377	chr8	13158557	13158994	+	0	NA	promoter-TSS (NM_010684)	promoter-TSS (NM_010684)	-360	NM_010684	16783	Mm.16716	NM_010684	ENSMUSG00000031447	Lamp1	AI196048|CD107a|Lamp-1	lysosomal-associated membrane protein 1	protein-coding
unique_peak1-5686-36-6-2.67196616411015-7.63095141572459	chr6	32510884	32512317	+	0	NA	intron (NM_175750, intron 1 of 31)	Tigger7|DNA|MER2_type	26592	NM_175750	243743	Mm.444029	NM_175750	ENSMUSG00000029765	Plxna4	9330117B14|Plxa4|mKIAA1550	plexin A4	protein-coding
common_peak1-18352-18-33--0.774543690021988-1.00055860626307	chr8	69791007	69791840	+	0	NA	Intergenic	RMER13A|LTR|ERVK	-223234	NM_008673	17960	Mm.14125	NM_008673	ENSMUSG00000025588	Nat1	Nat-1	N-acetyl transferase 1	protein-coding
unique_peak1-6651-12-5-1.06381348436648-1.78669045979184	chr8	13686380	13686933	+	0	NA	Intergenic	Intergenic	-9069	NM_009025	19414	Mm.18517	NM_009025	ENSMUSG00000031453	Rasa3	AI326412|C86362|E130011G04|GAPIII|scat	RAS p21 protein activator 3	protein-coding
unique_peak2-36373-10-7-0.356415345008769-1.12966497611638	chr2	116818865	116819501	+	0	NA	Intergenic	Intergenic	93295	NR_040335	320975	Mm.132509	NR_040335	ENSMUSG00000085316	D330050G23Rik	-	RIKEN cDNA D330050G23 gene	ncRNA
unique_peak2-33236-1-9--2.94898510510411-2.31132995230379	chr10	121385653	121385981	+	0	NA	intron (NM_001242411, intron 1 of 21)	intron (NM_001242411, intron 1 of 21)	98554	NM_001242411	117600	Mm.288698	NM_001081037	ENSMUSG00000020121	Srgap1	4930572H05Rik|Arhgap13	SLIT-ROBO Rho GTPase activating protein 1	protein-coding
common_peak1-7671-16-10-0.658832023630764-0.699649909729472	chr1	75248406	75249211	+	0	NA	intron (NM_008985, intron 18 of 22)	intron (NM_008985, intron 18 of 22)	11975	NM_008985	19275	Mm.2902	NM_008985	ENSMUSG00000026204	Ptprn	IA-2|mIA-A|mKIAA4064	protein tyrosine phosphatase, receptor type, N	protein-coding
common_peak1-7791-31-38--0.0601635480491254-0.30392537800267	chr1	100230960	100231923	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-86260	NM_001164233	70866	Mm.389164	NM_027584	ENSMUSG00000026336	Slco6d1	4921511I05Rik	solute carrier organic anion transporter family, member 6d1	protein-coding
common_peak1-11432-24-17-0.623284901325404-0.890873221665474	chr15	99849808	99850737	+	0	NA	Intergenic	Intergenic	-18823	NM_001159361	239667	Mm.243658	NM_172819	ENSMUSG00000023026	Dip2b	4932422C22|AI317237|AI854602|mKIAA1463	DIP2 disco-interacting protein 2 homolog B (Drosophila)	protein-coding
common_peak2-26629-15-19--0.309763344331706-0.356936432242222	chr2	119156170	119156990	+	0	NA	intron (NM_019454, intron 7 of 10)	intron (NM_019454, intron 7 of 10)	-4647	NR_030683	100043609	Mm.185068	NR_030683	ENSMUSG00000074912	Gm14207	OTTMUSG00000015946	predicted gene 14207	ncRNA
common_peak2-20502-13-22--0.745089925419244-0.690311289528838	chr10	59509431	59510123	+	0	NA	intron (NM_001199187, intron 6 of 10)	intron (NM_001199187, intron 6 of 10)	43702	NM_001199187	69090	Mm.155839	NM_026937	ENSMUSG00000044475	Ascc1	1810015P09Rik|AI550520|ASC1p50|CGI-18	activating signal cointegrator 1 complex subunit 1	protein-coding
unique_peak2-37678-8-7-0.00522241794757061-1.00793137938329	chr5	96792646	96793183	+	0	NA	Intergenic	Intergenic	-10060	NM_175473	231470	Mm.291120	NM_175473	ENSMUSG00000034687	Fras1	E130113P14Rik|bl|mKIAA1500	Fraser syndrome 1 homolog (human)	protein-coding
common_peak2-30740-13-10-0.319040412000471-0.446472590016315	chr7	118494593	118495024	+	0	NA	Intergenic	Lx9|LINE|L1	-228619	NR_015573	75479	Mm.381620	NR_015573		1700012D14Rik	-	RIKEN cDNA 1700012D14 gene	ncRNA
common_peak1-13610-89-134--0.0418488422248284-0.308404965154192	chr2	20967776	20969510	+	0	NA	Intergenic	Intergenic	78142	NR_033225	433408	Mm.386941	NR_033225		Gm13375	OTTMUSG00000011664	predicted gene 13375	ncRNA
common_peak2-22774-24-19-0.471281807880354-0.677583764578261	chr14	30654343	30654887	+	0	NA	Intergenic	Intergenic	-119565	NM_009785	12294	Mm.386754	NM_009785	ENSMUSG00000021991	Cacna2d3	Cacnad3	calcium channel, voltage-dependent, alpha2/delta subunit 3	protein-coding
unique_peak2-34726-2-13--2.72480917832092-2.79529063155376	chr15	36938854	36939485	+	0	NA	Intergenic	Intergenic	-2012	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
common_peak2-29647-10-9-0.0344872501214071-1.05503135781948	chr6	67101881	67102387	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-114733	NM_007836	13197	Mm.72235	NM_007836	ENSMUSG00000036390	Gadd45a	AA545191|Ddit1|GADD45	growth arrest and DNA-damage-inducible 45 alpha	protein-coding
common_peak1-16718-37-53--0.228894430677649-0.408596647434913	chr6	29608865	29610018	+	0	NA	Intergenic	Intergenic	-34815	NM_146173	232670	Mm.225289	NM_146173	ENSMUSG00000001763	Tspan33	1300010A20Rik|Pen	tetraspanin 33	protein-coding
unique_peak1-1501-14-3-1.89921616035764-2.80787975886178	chr13	3361092	3361786	+	0	NA	Intergenic	Intergenic	-116110	NR_015522	76937	Mm.487240	NR_015522	ENSMUSG00000097709	2810429I04Rik	AI256682	RIKEN cDNA 2810429I04 gene	ncRNA
common_peak2-20761-15-16--0.075298090694683-0.301029995663976	chr10	116191970	116192407	+	0	NA	Intergenic	Intergenic	-25955	NR_045345	72286	Mm.396207	NR_045345		1700030O20Rik	-	RIKEN cDNA 1700030O20 gene	ncRNA
common_peak1-9424-62-62-0.433471535302168-1.08568458489398	chr11	101442151	101443343	+	0	NA	promoter-TSS (NM_144830)	promoter-TSS (NM_144830)	-809	NM_144830	217203	Mm.280559	NM_144830	ENSMUSG00000034947	Tmem106a	0610008L10Rik|AI043106|BC022145	transmembrane protein 106A	protein-coding
common_peak2-19801-18-33--0.774543690021988-1.00055860626307	chr1	87853255	87854193	+	0	NA	intron (NM_001033290, intron 1 of 1)	intron (NM_001033290, intron 1 of 1)	3906	NM_001033290	227326	Mm.244158	NM_001033290	ENSMUSG00000049608	Gpr55	Gm218|Lpir1	G protein-coupled receptor 55	protein-coding
common_peak1-10975-16-7-1.11826364226806-1.23399803405144	chr15	31167670	31168537	+	0	NA	intron (NM_146057, intron 2 of 3)	intron (NM_146057, intron 2 of 3)	13963	NM_146057	223453	Mm.222867	NM_146057	ENSMUSG00000039168	Dap	4921531N22Rik|AI789753|AU040360	death-associated protein	protein-coding
common_peak2-23015-5-9--1.02630843089322-1.21398586181642	chr14	62992417	62992735	+	0	NA	TTS (NM_026001)	TTS (NM_026001)	41634	NM_026001	67153	Mm.26040	NM_026001	ENSMUSG00000021932	Rnaseh2b	1110019N06Rik|2610207P08Rik|Dleu8	ribonuclease H2, subunit B	protein-coding
unique_peak2-36302-6-9--0.75652998450706-1.11707584880836	chr2	73311918	73312448	+	0	NA	intron (NM_153138, intron 1 of 7)	intron (NM_153138, intron 1 of 7)	11627	NM_001289723	215280	Mm.223504	NM_153138	ENSMUSG00000075284	Wipf1	AI115543|D2Ertd120e|WIP|Waspip	WAS/WASL interacting protein family, member 1	protein-coding
unique_peak1-5688-11-4-1.18676548936425-1.68134727924692	chr6	33515189	33515908	+	0	NA	intron (NM_009148, intron 9 of 17)	intron (NM_009148, intron 9 of 17)	316398	NM_009148	20336	Mm.265512	NM_009148		Exoc4	C78892|Sec8|Sec8l1	exocyst complex component 4	protein-coding
unique_peak2-36189-4-9--1.34538860874061-1.36011389749466	chr2	30919794	30920362	+	0	NA	intron (NM_001038700, intron 6 of 14)	MMAR1|DNA|Mariner	31942	NM_001177650	14269	Mm.52297	NM_019406	ENSMUSG00000075415	Fnbp1	1110057E06Rik|2210010H06Rik|FBP1|Fbp17	formin binding protein 1	protein-coding
common_peak1-17485-31-17-1.05531366937081-1.94848218498813	chr7	24530654	24532039	+	0	NA	Intergenic	L1Md_F3|LINE|L1	-7584	NM_207548	404291	Mm.160375	NM_207548	ENSMUSG00000090411	Vmn1r174	V1rd22	vomeronasal 1 receptor 174	protein-coding
common_peak1-9061-29-26-0.357402578451643-0.590428395010953	chr11	69015767	69017077	+	0	NA	Intergenic	Intergenic	-5077	NM_009661	11688	Mm.289672	NM_009661	ENSMUSG00000020891	Alox8	15-LOX-2|15-LOX-B|8-LOX|8S-LOX|Alox15b	arachidonate 8-lipoxygenase	protein-coding
common_peak1-16278-13-9-0.456543935750406-0.53895475198017	chr5	109996055	109996720	+	0	NA	Intergenic	Intergenic	-8375	NM_001164735	57914	Mm.35771	NM_016715	ENSMUSG00000033467	Crlf2	CRLM2|Ly114|Tpte2|Tslpr	cytokine receptor-like factor 2	protein-coding
unique_peak1-7079-15-3-2.01216475055566-3.03427613622886	chr9	21725459	21726103	+	0	NA	exon (NM_178577, exon 4 of 4)	exon (NM_178577, exon 4 of 4)	-3216	NM_031874	19340	Mm.260157	NM_031874	ENSMUSG00000019066	Rab3d	C130057E11Rik	RAB3D, member RAS oncogene family	protein-coding
unique_peak2-35317-8-14--0.901668177660948-0.660903317613906	chr17	15067568	15068341	+	0	NA	intron (NM_175173, intron 3 of 24)	intron (NM_175173, intron 3 of 24)	12175	NM_175173	71682	Mm.122698	NM_175173	ENSMUSG00000046991	Wdr27	0610012K18Rik	WD repeat domain 27	protein-coding
unique_peak2-38939-3-11--1.99894559068043-1.95434855131066	chr8	25201150	25201844	+	0	NA	Intergenic	Intergenic	347921	NM_026931	69068	Mm.25775	NM_026931	ENSMUSG00000056313	1810011O10Rik	1110065B09Rik|AW121743|AW321058	RIKEN cDNA 1810011O10 gene	protein-coding
common_peak1-13623-32-28-0.421111024092088-0.694972475810963	chr2	25143799	25144860	+	0	NA	intron (NM_030055, intron 3 of 3)	intron (NM_030055, intron 3 of 3)	664	NM_030055	78217	Mm.160057	NM_030055	ENSMUSG00000026963	Tmem210	4930571C24Rik	transmembrane protein 210	protein-coding
unique_peak2-38333-7-40--2.55846117431989-5.85892640211067	chr7	7077349	7078168	+	0	NA	Intergenic	Intergenic	-3571	NM_172738	232853	Mm.23838	NM_172738	ENSMUSG00000062116	Zfp954	5730403M16Rik|8030437F07|AA123315	zinc finger protein 954	protein-coding
unique_peak2-36544-5-4--0.0263084308932156-0.909929411522249	chr2	165598097	165598468	+	0	NA	Intergenic	Intergenic	85391	NM_001252585	228880	Mm.227598	NM_027230	ENSMUSG00000039671	Zmynd8	1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7	zinc finger, MYND-type containing 8	protein-coding
unique_peak1-6096-15-8-0.842239749113344-0.891319708951327	chr6	125096318	125097151	+	0	NA	intron (NM_178787, intron 1 of 8)	intron (NM_178787, intron 1 of 8)	1465	NM_001039669	320678	Mm.129415	NM_178787	ENSMUSG00000038271	Iffo1	4733401N06Rik|A930037G23Rik|HOM-TES-103|Iffo	intermediate filament family orphan 1	protein-coding
common_peak1-18606-33-67--0.75612527872481-1.79658675346641	chr8	107095639	107096775	+	0	NA	Intergenic	(GA)n|Simple_repeat|Simple_repeat	-19161	NM_001024606	382051	Mm.290750	NM_001024606	ENSMUSG00000048371	Pdp2	4833426J09Rik|Gm1705|mKIAA1348	pyruvate dehyrogenase phosphatase catalytic subunit 2	protein-coding
common_peak2-26067-48-94--0.598928457096133-1.63896674060666	chr2	72285463	72286494	+	0	NA	Intergenic	Intergenic	-28298	NM_025866	66953	Mm.270676	NM_025866	ENSMUSG00000055612	Cdca7	2310021G01Rik|AU044109|JPO1	cell division cycle associated 7	protein-coding
unique_peak2-39191-4-6--0.830815435910851-0.989110657569874	chr8	104250770	104251174	+	0	NA	Intergenic	Intergenic	1058039	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
common_peak2-19960-50-24-1.39708412670423-4.72687330272493	chr1	132476921	132477778	+	0	NA	intron (NM_009581, intron 10 of 11)	L1_Rod|LINE|L1	48834	NM_009581	22789	Mm.4644	NM_009581	ENSMUSG00000042554	Zp3r	AV264399|SP56	zona pellucida 3 receptor	protein-coding
common_peak1-13195-30-11-1.58471290877072-3.34305003325519	chr19	21077388	21078380	+	0	NA	Intergenic	Intergenic	-49192	NM_028953	13409	Mm.219585	NM_028953	ENSMUSG00000024749	Tmc1	4933416G09Rik|Beethoven|Bth|CWEA1|dn	transmembrane channel-like gene family 1	protein-coding
common_peak2-25176-28-39--0.2689689750659-0.409729630423047	chr18	54987193	54988698	+	0	NA	Intergenic	Intergenic	161889	NM_175751	269023	Mm.192984	NM_175751	ENSMUSG00000052713	Zfp608	4932417D18Rik|D430007A19Rik|Znf608	zinc finger protein 608	protein-coding
common_peak1-16526-9-16--0.897849434846119-0.732381977911291	chr5	142463964	142464507	+	0	NA	intron (NM_177879, intron 14 of 44)	intron (NM_177879, intron 14 of 44)	-413216	NM_199068	17425	Mm.24214	NM_010812	ENSMUSG00000056493	Foxk1	A630048H08Rik|AI463295|ENSMUSG00000075577|Gm10868|Mnf	forkhead box K1	protein-coding
common_peak2-31945-82-122--0.0492513610335052-0.309139438170586	chr9	64340255	64341713	+	0	NA	intron (NM_172522, intron 1 of 22)	(TAAA)n|Simple_repeat|Simple_repeat	107551	NM_001134399	214058	Mm.127721	NM_172522	ENSMUSG00000036466	Megf11	2410080H04Rik|D130061K05	multiple EGF-like-domains 11	protein-coding
unique_peak1-27-8-0-3.00522241794757-2.70926996097583	chr1	9946112	9946627	+	0	NA	Intergenic	AT_rich|Low_complexity|Low_complexity	11197	NM_001285425	100039596	Mm.412928	NM_001285425	ENSMUSG00000099032	Tcf24	ENSMUSG00000073738|Gm10567|Gm2330	transcription factor 24	protein-coding
common_peak2-29183-18-18-0.0649916377847664-0.323898164595606	chr5	135064189	135064834	+	0	NA	intron (NM_020022, intron 2 of 10)	L1_Mus4|LINE|L1	5951	NM_020022	19718	Mm.332739	NM_020022	ENSMUSG00000023104	Rfc2	2610008M13Rik|40kDa|AI326953|Recc2	replication factor C (activator 1) 2	protein-coding
common_peak1-11722-10-14--0.550475250599749-0.446472590016315	chr16	32803469	32803995	+	0	NA	Intergenic	Intergenic	-6211	NM_001145874	224116	Mm.153301	NM_146071	ENSMUSG00000035638	Muc20	BC026367	mucin 20	protein-coding
unique_peak2-37464-7-9--0.522837264589173-1.05908390183068	chr5	113163932	113164482	+	0	NA	intron (NM_028901, intron 39 of 43)	intron (NM_028901, intron 39 of 43)	-58105	NR_040675	67360	Mm.59218	NR_040675	ENSMUSG00000098230	1700095B10Rik	-	RIKEN cDNA 1700095B10 gene	ncRNA
common_peak1-8326-14-10-0.439784541720347-0.519648556297791	chr10	43689162	43689819	+	0	NA	intron (NM_172393, intron 11 of 19)	intron (NM_172393, intron 11 of 19)	35162	NM_172393	11630	Mm.292082	NM_172393	ENSMUSG00000019866	Aim1	AI462491|AI463325	absent in melanoma 1	protein-coding
common_peak1-14529-135-172-0.322857175403737-1.38686189943573	chr3	30010526	30013471	+	0	NA	Intergenic	Intergenic	-99872	NM_007963	14013	Mm.56965	NM_007963	ENSMUSG00000027684	Mecom	D630039M04Rik|Evi-1|Evi1|Jbo|Mds|Mds1|Mds1-Evi1|Prdm3|Znfpr1b1	MDS1 and EVI1 complex locus	protein-coding
unique_peak1-2143-11-5-0.923731083530457-1.477227296591	chr15	58386372	58386983	+	0	NA	Intergenic	Intergenic	139654	NM_145959	210998	Mm.3224	NM_145959	ENSMUSG00000037119	D15Ertd621e	AV220772|BC033609|Fam91a1|SKIN|mKIAA0493	DNA segment, Chr 15, ERATO Doi 621, expressed	protein-coding
common_peak2-22895-17-21--0.24113528043226-0.322753776620787	chr14	32201849	32202562	+	0	NA	intron (NM_011894, intron 3 of 8)	B4A|SINE|B4	47014	NM_011894	24056	Mm.383198	NM_011894	ENSMUSG00000021892	Sh3bp5	AI606498|SH3BP-5|Sab	SH3-domain binding protein 5 (BTK-associated)	protein-coding
common_peak1-18875-9-25--1.51082631173687-2.00244947055753	chr9	23223117	23223638	+	0	NA	intron (NM_028472, intron 13 of 14)	intron (NM_028472, intron 13 of 14)	195857	NM_028472	73230	Mm.335020	NM_028472	ENSMUSG00000031963	Bmper	3110056H04Rik|CV-2|Crim3|Cv2	BMP-binding endothelial regulator	protein-coding
common_peak1-16538-8-12--0.695217300193522-0.475924844171029	chr5	143269588	143270035	+	0	NA	intron (NM_001122730, intron 16 of 18)	intron (NM_001122730, intron 16 of 18)	-7122	NR_110503	102631757	Mm.373036	NR_110502		LOC102631757	-	uncharacterized LOC102631757	ncRNA
common_peak2-24128-19-20-0.0103699038829257-0.306326795069978	chr16	34784187	34785112	+	0	NA	promoter-TSS (NM_139300)	promoter-TSS (NM_139300)	-387	NM_139300	107589	Mm.33360	NM_139300	ENSMUSG00000022836	Mylk	9530072E15Rik|A930019C19Rik|AW489456|KRP|MLCK108|MLCK210|Mlck|smMLCK	myosin, light polypeptide kinase	protein-coding
common_peak2-28846-31-54--0.556121042711537-0.994719720785867	chr5	72647684	72649015	+	0	NA	intron (NR_003966, intron 10 of 22)	intron (NR_003966, intron 10 of 22)	53767	NM_153389	231287	Mm.32775	NM_153389	ENSMUSG00000046808	Atp10d	9830145H18Rik|ATPVD|D5Buc24e	ATPase, class V, type 10D	protein-coding
common_peak1-19497-14-19--0.422711934529718-0.403453972741636	chrX	160501914	160502687	+	0	NA	Intergenic	RMER10B|LTR|ERVL	11681	NM_009173	20438	Mm.37215	NM_009173	ENSMUSG00000040749	Siah1b	AA960570|Sinh1b	seven in absentia 1B	protein-coding
common_peak2-28456-19-27--0.404667595395917-0.464317215211849	chr4	150855103	150855833	+	0	NA	intron (NM_001081557, intron 4 of 23)	L1ME2z|LINE|L1	380409	NM_001081557	100072	Mm.318846	NM_001081557	ENSMUSG00000014592	Camta1	1810059M14Rik|2310058O09Rik|AI316882|AW987475|mKIAA0833	calmodulin binding transcription activator 1	protein-coding
unique_peak1-6328-12-2-2.06381348436648-2.79529063155376	chr7	46841129	46841712	+	0	NA	Intergenic	Intergenic	68284	NM_001004139	70227	Mm.333800	NM_001004139	ENSMUSG00000068959	Zfp619	3000002G13Rik	zinc finger protein 619	protein-coding
common_peak2-21807-18-16-0.225456309978012-0.397739447719379	chr11	118415353	118416177	+	0	NA	intron (NM_001285436, intron 3 of 13)	intron (NM_001285436, intron 3 of 13)	77491	NM_172573	217364	Mm.473963	NM_172573	ENSMUSG00000033857	Engase	C130099A03|D230014K01Rik	endo-beta-N-acetylglucosaminidase	protein-coding
unique_peak2-33499-3-7--1.41398308995928-1.23214870625617	chr11	72792266	72792615	+	0	NA	intron (NM_001163336, intron 12 of 20)	ID_B1|SINE|B4	17769	NM_001163337	53313	Mm.6306	NM_016745	ENSMUSG00000020788	Atp2a3	SERCA3b|Serca3	ATPase, Ca++ transporting, ubiquitous	protein-coding
common_peak1-17010-9-11--0.395349094316936-0.344532117358383	chr6	90369605	90370150	+	0	NA	intron (NM_173775, intron 2 of 16)	intron (NM_173775, intron 2 of 16)	8597	NM_173775	243538	Mm.386876	NM_173775	ENSMUSG00000048794	Ccdc37	AW048498|C030041G11Rik|C230069K22Rik	coiled-coil domain containing 37	protein-coding
common_peak1-19431-9-21--1.26981821223308-1.37307999835977	chrX	77796373	77797003	+	0	NA	Intergenic	Intergenic	-519295	NM_138751	192216	Mm.490421	NM_138751	ENSMUSG00000025666	Tmem47	3010015F07Rik|AI115536|BCMP1|Tm4sf10	transmembrane protein 47	protein-coding
unique_peak2-38428-3-7--1.41398308995928-1.23214870625617	chr7	25686940	25687305	+	0	NA	promoter-TSS (NM_001130150)	promoter-TSS (NM_001130150)	-883	NM_001130150	16801	Mm.3181	NM_008488	ENSMUSG00000040940	Arhgef1	Lbcl2|Lsc	Rho guanine nucleotide exchange factor (GEF) 1	protein-coding
common_peak1-12788-9-8-0.0196884049619079-1.03275496310833	chr18	64075900	64076437	+	0	NA	intron (NM_001014981, intron 22 of 27)	L1Md_T|LINE|L1	207819	NM_001014981	104082	Mm.30850	NM_001014981	ENSMUSG00000040560	Wdr7	AI462727|TRAG|mKIAA0541	WD repeat domain 7	protein-coding
common_peak1-14434-25-33--0.225612935905233-0.357106932979091	chr2	180967151	180968066	+	0	NA	exon (NM_183162, exon 9 of 19)	exon (NM_183162, exon 9 of 19)	9124	NM_183162	229003	Mm.315872	NM_183162	ENSMUSG00000027580	Helz2	PDIP1|Pric285|mKIAA1769|mPDIP1	helicase with zinc finger 2, transcriptional coactivator	protein-coding
common_peak2-29027-14-18--0.348711353085941-0.360333814299795	chr5	113872310	113873239	+	0	NA	Intergenic	Intergenic	-46693	NM_177292	320916	Mm.102783	NM_177292	ENSMUSG00000063430	Wscd2	4933413A10Rik|C530024P05Rik|Gm450	WSC domain containing 2	protein-coding
common_peak1-13030-10-18--0.891512168434816-0.804350088532826	chr19	5487880	5488426	+	0	NA	5' UTR (NM_027877, exon 1 of 16)	5' UTR (NM_027877, exon 1 of 16)	183	NM_027877	71711	Mm.27697	NM_027877	ENSMUSG00000024906	Mus81	1200008A18Rik|AI182501|AW045863	MUS81 endonuclease homolog (yeast)	protein-coding
common_peak2-23908-50-63-0.0409403164789524-0.316181169053401	chr16	4789802	4790870	+	0	NA	promoter-TSS (NM_025670)	promoter-TSS (NM_025670)	-401	NM_025670	66626	Mm.157648	NM_025670	ENSMUSG00000004071	Cdip1	2700048O17Rik|5730403B10Rik|AU018521|AW742692|CDIP	cell death inducing Trp53 target 1	protein-coding
common_peak2-25007-59-64-0.302996187844124-0.687867803885541	chr18	12972768	12974104	+	0	NA	intron (NM_001252490, intron 3 of 13)	intron (NM_001252490, intron 3 of 13)	4980	NR_045524	64291	Mm.259470	NM_020573	ENSMUSG00000044252	Osbpl1a	G430090F17Rik|Gm753|ORP-1|Osbpl1b	oxysterol binding protein-like 1A	protein-coding
common_peak2-28455-1-9--2.94898510510411-2.31132995230379	chr4	150854544	150854917	+	0	NA	intron (NM_001081557, intron 4 of 23)	intron (NM_001081557, intron 4 of 23)	381147	NM_001081557	100072	Mm.318846	NM_001081557	ENSMUSG00000014592	Camta1	1810059M14Rik|2310058O09Rik|AI316882|AW987475|mKIAA0833	calmodulin binding transcription activator 1	protein-coding
unique_peak1-3046-8-2-1.42025991722641-1.65811743852845	chr18	5464961	5465310	+	0	NA	Intergenic	Intergenic	-126723	NM_011546	21417	Mm.3929	NM_011546	ENSMUSG00000024238	Zeb1	3110032K11Rik|AREB6|BZP|MEB1|Nil2|TCF-8|Tcf18|Tcf8|Tw|ZEB|Zfhep|Zfhx1a|Zfx1a|Zfx1ha|[delta]EF1	zinc finger E-box binding homeobox 1	protein-coding
common_peak2-22972-61-75-0.134821816305755-0.389025993365906	chr14	54617383	54618668	+	0	NA	Intergenic	Lx7|LINE|L1	255579	NM_001113358	13135	Mm.319038	NM_010015	ENSMUSG00000022174	Dad1	AI323713	defender against cell death 1	protein-coding
common_peak2-20245-10-5-0.771452844287613-1.33892459842472	chr1	183905645	183906030	+	0	NA	intron (NM_001083121, intron 1 of 13)	intron (NM_001083121, intron 1 of 13)	44274	NM_008680	13800	Mm.87759	NM_008680	ENSMUSG00000022995	Enah	Mena|NDPP-1|Ndpp1|WBP8	enabled homolog (Drosophila)	protein-coding
common_peak1-12516-19-21--0.0567442919756109-0.301029995663971	chr18	24723056	24724035	+	0	NA	Intergenic	MERVL_2A-int|LTR|ERVL	-34840	NM_144861	225283	Mm.28427	NM_144861	ENSMUSG00000040446	Rprd1a	C77387|mKIAA4077	regulation of nuclear pre-mRNA domain containing 1A	protein-coding
common_peak1-19106-22-38--0.638118113774844-0.887741995158868	chr9	75037645	75038412	+	0	NA	intron (NM_010864, intron 30 of 40)	intron (NM_010864, intron 30 of 40)	-41793	NM_001081322	208943	Mm.41339	NM_001081322	ENSMUSG00000033590	Myo5c	9130003O20Rik|BB085560|C330029I24	myosin VC	protein-coding
unique_peak1-6184-8-3-1.00522241794757-1.39487600375387	chr6	146527990	146528565	+	0	NA	intron (NM_026218, intron 1 of 6)	intron (NM_026218, intron 1 of 6)	1844	NM_026218	67529	Mm.333499	NM_026218	ENSMUSG00000040242	Fgfr1op2	1500031J01Rik	FGFR1 oncogene partner 2	protein-coding
common_peak2-30962-13-23--0.806490470083387-0.781208772652439	chr8	95141854	95142684	+	0	NA	Intergenic	Intergenic	-55919	NM_022428	64379	Mm.137247	NM_022428		Irx6	-	Iroquois related homeobox 6 (Drosophila)	protein-coding
unique_peak1-6596-8-3-1.00522241794757-1.39487600375387	chr7	145013626	145014285	+	0	NA	Intergenic	Intergenic	384598	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
common_peak1-17442-19-33--0.684775514588653-0.884951936461256	chr7	16313363	16314251	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-21912	NM_145709	252829	Mm.222738	NM_145709		Obox5	C87544	oocyte specific homeobox 5	protein-coding
unique_peak2-33434-9-21--1.26981821223308-1.37307999835977	chr11	60935354	60936045	+	0	NA	Intergenic	Intergenic	-18638	NM_021349	57916	Mm.265915	NM_021349	ENSMUSG00000010142	Tnfrsf13b	1200009E08Rik|Taci	tumor necrosis factor receptor superfamily, member 13b	protein-coding
unique_peak1-1343-10-4-1.03448725012141-1.5150158574804	chr12	16831033	16831520	+	0	NA	intron (NR_027677, intron 6 of 7)	intron (NR_027677, intron 6 of 7)	13505	NM_033270	50496	Mm.23296	NM_033270	ENSMUSG00000057469	E2f6	AI462434|E2F6b|EMA	E2F transcription factor 6	protein-coding
common_peak2-25265-27-35--0.178379050547076-0.330208782692001	chr18	67610069	67610985	+	0	NA	Intergenic	Intergenic	-1737	NM_027130	69597	Mm.426052	NM_027130	ENSMUSG00000024527	Afg3l2	2310036I02Rik|AW260507|Emv66|par	AFG3-like AAA ATPase 2	protein-coding
common_peak1-9220-20-18-0.240147271147608-0.388034239052786	chr11	83850740	83851548	+	0	NA	intron (NM_194341, intron 18 of 19)	L1ME2|LINE|L1	30715	NM_019819	56405	Mm.240885	NM_019819	ENSMUSG00000018648	Dusp14	1110014C10Rik|2310042C07Rik|D11Ertd395e|MKP-L|Mkp6	dual specificity phosphatase 14	protein-coding
common_peak1-9122-13-31--1.22152796936223-1.73082168901047	chr11	74832559	74833135	+	0	NA	intron (NM_001002764, intron 10 of 18)	ORR1C2|LTR|MaLR	46646	NR_030454	735274		NR_030454		Mir684-1	Mirn684-1	microRNA 684-1	ncRNA
unique_peak2-35464-4-5--0.608423014574403-0.909929411522249	chr17	42938645	42938936	+	0	NA	intron (NM_009847, intron 16 of 17)	intron (NM_009847, intron 16 of 17)	-59662	NM_001033493	435529	Mm.136350	NM_001033493	ENSMUSG00000057899	Gpr111	PGR20	G protein-coupled receptor 111	protein-coding
common_peak2-21053-15-8-0.842239749113344-0.891319708951327	chr11	43895469	43896017	+	0	NA	Intergenic	MTEb|LTR|MaLR	-181004	NM_001284381	11548	Mm.39086	NM_007416	ENSMUSG00000050541	Adra1b	[a]1b	adrenergic receptor, alpha 1b	protein-coding
unique_peak2-32791-8-28--1.85275857718-2.85636458546265	chr1	181150837	181151576	+	0	NA	intron (NM_027188, intron 5 of 11)	intron (NM_027188, intron 5 of 11)	296928	NM_027188	69726	Mm.222338	NM_027188		Smyd3	2410008A19Rik|Zmynd1	SET and MYND domain containing 3	protein-coding
common_peak2-20840-17-14-0.311405742596519-0.466170754204149	chr11	43433724	43434477	+	0	NA	Intergenic	Intergenic	-19036	NM_008375	16204	Mm.142716	NM_008375	ENSMUSG00000020405	Fabp6	GT|I-15P|I-BABP|ILBP|ILBP3|Illbp	fatty acid binding protein 6, ileal (gastrotropin)	protein-coding
unique_peak1-7048-8-3-1.00522241794757-1.39487600375387	chr9	21168000	21168555	+	0	NA	Intergenic	Intergenic	-4038	NM_001042708	16201	Mm.440026	NM_010561	ENSMUSG00000032178	Ilf3	MBII-26|MPHOSPH4|NF90|NFAR	interleukin enhancer binding factor 3	protein-coding
common_peak2-22037-18-25--0.38752056691274-0.421916810733234	chr12	69296387	69297127	+	0	NA	Intergenic	Intergenic	-526499	NR_033146	100316870	Mm.379794	NR_033146		Gm17821	-	DDB1 and CUL4 associated factor 5 pseudogene	pseudo
unique_peak1-1932-10-2-1.77145284428761-2.09384600808989	chr14	76693860	76694501	+	0	NA	Intergenic	Intergenic	-121448	NM_207652	21807	Mm.153272	NM_009366	ENSMUSG00000022010	Tsc22d1	AA589566|AW105905|Egr5|TSC-22|Tgfb1i4|Tsc|Tsc22	TSC22 domain family, member 1	protein-coding
common_peak2-21712-22-19-0.325356010200042-0.479250674391597	chr11	108307041	108307876	+	0	NA	intron (NM_029606, intron 5 of 27)	MER74B|LTR|ERVL	20878	NM_029606	76380	Mm.344071	NM_029586	ENSMUSG00000020728	Cep112	1700001M19Rik|1700029K01Rik|8430407H02Rik|AV043680|AV207351|Ccdc46|Macoco	centrosomal protein 112	protein-coding
unique_peak1-75-13-2-2.19350952991661-3.03832868024006	chr1	39105240	39105728	+	0	NA	Intergenic	Intergenic	60825	NM_026850	68833	Mm.28121	NM_026850	ENSMUSG00000026078	Pdcl3	1110061A19Rik|C80025|Viaf1	phosducin-like 3	protein-coding
common_peak2-28367-72-119--0.238306782736201-0.585272478421067	chr4	137356876	137357902	+	0	NA	Intergenic	Intergenic	-5090	NM_007431	11647	Mm.288186	NM_007431	ENSMUSG00000028766	Alpl	APTNAP|Akp-2|Akp2|TNAP|TNSALP	alkaline phosphatase, liver/bone/kidney	protein-coding
common_peak2-20650-9-17--0.980311595038092-0.844317084070804	chr10	81648754	81649389	+	0	NA	Intergenic	L1_Mur3|LINE|L1	54949	NM_001105557	237411		NM_172789	ENSMUSG00000062931	Zfp938	B230315N10Rik	zinc finger protein 938	protein-coding
unique_peak2-33331-7-9--0.522837264589173-1.05908390183068	chr11	19925350	19925921	+	0	NA	Intergenic	(GA)n|Simple_repeat|Simple_repeat	87319	NM_146243	66713	Mm.259045	NM_146243	ENSMUSG00000020152	Actr2	4921510D23Rik|AA409782|Arp2|D6Ertd746e	ARP2 actin-related protein 2	protein-coding
unique_peak1-5071-13-4-1.45654393575041-2.23384849113406	chr4	139602109	139602830	+	0	NA	intron (NM_198610, intron 4 of 9)	ORR1A2|LTR|MaLR	-78528	NM_173427	242721	Mm.60400	NM_173427	ENSMUSG00000078234	Klhdc7a	B230308G19Rik	kelch domain containing 7A	protein-coding
common_peak1-12647-46-44-0.406142846919127-0.83767504605574	chr18	35598481	35599285	+	0	NA	intron (NM_030749, intron 1 of 9)	intron (NM_030749, intron 1 of 9)	59696	NM_030749	81500	Mm.291482	NM_030749	ENSMUSG00000024357	Sil1	1810057E01Rik|AI042831|wz	endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)	protein-coding
unique_peak1-1891-15-4-1.69023665566829-1.97518968347063	chr14	64633055	64633674	+	0	NA	intron (NM_146246, intron 1 of 3)	B4|SINE|B4	22096	NM_146246	271209	Mm.300655	NM_146246	ENSMUSG00000046049	Rp1l1	BC031365|BE983540|Dcdc4|Rp1hl1	retinitis pigmentosa 1 homolog (human)-like 1	protein-coding
unique_peak2-32517-11-13--0.298661337805991-0.337263207250336	chr1	58585555	58586253	+	0	NA	3' UTR (NM_172513, exon 12 of 12)	3' UTR (NM_172513, exon 12 of 12)	-23951	NM_008765	18393	Mm.3411	NM_008765	ENSMUSG00000026037	Orc2	AU041563|Orc2l	origin recognition complex, subunit 2	protein-coding
common_peak1-12808-37-22-1.00243111542881-2.18062287223157	chr18	66470415	66472078	+	0	NA	Intergenic	Intergenic	-19754	NM_178793	320924	Mm.442049	NM_178793	ENSMUSG00000046318	Ccbe1	4933426F18Rik|9430093N24Rik|mKIAA1983	collagen and calcium binding EGF domains 1	protein-coding
unique_peak1-4117-7-0-2.79909083029819-2.40823996531185	chr2	84545053	84545587	+	0	NA	intron (NM_144887, intron 2 of 11)	intron (NM_144887, intron 2 of 11)	10001	NM_144887	228136	Mm.288508	NM_144887	ENSMUSG00000034075	Zdhhc5	1110032A17Rik|AI451382|Zisp	zinc finger, DHHC domain containing 5	protein-coding
common_peak2-23391-37-58--0.356649977876023-0.602366141647657	chr15	58415308	58416308	+	0	NA	Intergenic	MLT1C|LTR|MaLR	168785	NM_145959	210998	Mm.3224	NM_145959	ENSMUSG00000037119	D15Ertd621e	AV220772|BC033609|Fam91a1|SKIN|mKIAA0493	DNA segment, Chr 15, ERATO Doi 621, expressed	protein-coding
common_peak1-8543-35-103--1.26906945967859-5.8172701526324	chr10	93160670	93161856	+	0	NA	intron (NM_021320, intron 3 of 9)	intron (NM_021320, intron 3 of 9)	-15196	NR_038017	100504069	Mm.391412	NR_038017	ENSMUSG00000085723	Gm15915	OTTMUSG00000027787	predicted gene 15915	ncRNA
common_peak2-28595-12-12--0.0516637330534535-0.309718203022949	chr5	21056274	21056761	+	0	NA	intron (NM_177076, intron 11 of 19)	MER63C|DNA|AcHobo	7172	NM_028977	74511	Mm.439963	NM_028977	ENSMUSG00000039883	Lrrc17	37kDa|4833425M04Rik|6130400C22Rik|P37nb	leucine rich repeat containing 17	protein-coding
unique_peak2-37794-4-19--2.34538860874061-2.60953805094651	chr5	121838558	121839361	+	0	NA	Intergenic	ID_B1|SINE|B4	-3335	NM_172275	231712	Mm.20488	NM_172275	ENSMUSG00000042726	Trafd1	1110008K06Rik|Fln29	TRAF type zinc finger domain containing 1	protein-coding
common_peak1-18057-43-45-0.25900122946669-0.518540604135974	chr7	145110027	145111874	+	0	NA	Intergenic	Intergenic	478463	NM_183289	70571	Mm.334297	NM_183289	ENSMUSG00000091002	Tcerg1l	5730476P14Rik	transcription elongation regulator 1-like	protein-coding
unique_peak1-971-14-4-1.57728806547028-2.4322161449009	chr11	61648099	61648838	+	0	NA	intron (NM_013881, intron 5 of 26)	intron (NM_013881, intron 5 of 26)	20126	NM_013881	29869	Mm.162025	NM_013881	ENSMUSG00000004798	Ulk2	A830085I22Rik|AU015340|Unc51.2|mKIAA0623	unc-51 like kinase 2	protein-coding
common_peak1-19486-51-39-0.75299573071521-1.92631927296918	chrX	150477670	150478817	+	0	NA	TTS (NM_001243016).2	TTS (NM_001243016).2	-9871	NM_001243016	625650	Mm.380194	NM_001243016	ENSMUSG00000096867	Gm10057	ENSMUSG00000058986	predicted gene 10057	protein-coding
common_peak2-28057-14-7-0.899216160357645-0.947446088118041	chr4	59332661	59333154	+	0	NA	intron (NM_001163288, intron 15 of 16)	B2_Mm2|SINE|B2	59984	NR_105031	101055769	Mm.421401	NR_105031		LOC101055769	-	uncharacterized LOC101055769	ncRNA
common_peak1-14950-11-14--0.398197011356905-0.379391706698377	chr3	104226864	104227527	+	0	NA	Intergenic	MTA_Mm-int|LTR|MaLR	88584	NM_001025067	269473	Mm.34855	NM_001025067	ENSMUSG00000032913	Lrig2	4632419I10Rik|BB096938	leucine-rich repeats and immunoglobulin-like domains 2	protein-coding
unique_peak1-1183-11-1-2.50869358425161-2.83420869758413	chr11	100992976	100993511	+	0	NA	Intergenic	B3|SINE|B2	11798	NM_134024	103733	Mm.479145	NM_134024	ENSMUSG00000035198	Tubg1	1500010O08Rik|AI451582|AI503389|Tubg	tubulin, gamma 1	protein-coding
unique_peak1-5580-8-4-0.683294323060208-1.21878474469819	chr5	149624143	149624576	+	0	NA	Intergenic	Intergenic	70943	NR_028285	70138	Mm.417834	NR_028285	ENSMUSG00000086494	2210417A02Rik	AV081004	RIKEN cDNA 2210417A02 gene	ncRNA
unique_peak2-36538-7-8--0.370834171144123-1.00793137938329	chr2	164520594	164521193	+	0	NA	Intergenic	L1M2|LINE|L1	-3108	NM_030058	78239	Mm.160060	NM_030058	ENSMUSG00000017310	Spint4	9230105I15Rik	serine protease inhibitor, Kunitz type 4	protein-coding
unique_peak1-2380-8-0-3.00522241794757-2.70926996097583	chr15	96244441	96244963	+	0	NA	3' UTR (NM_028148, exon 15 of 15)	3' UTR (NM_028148, exon 15 of 15)	46572	NM_028148	72193	Mm.324474	NM_028148	ENSMUSG00000033228	Scaf11	1110061H03Rik|2610510E10Rik|AI462454|CASP11|SIP1|SRRP129|Sfrs2ip|Srsf2ip|mKIAA3013	SR-related CTD-associated factor 11	protein-coding
unique_peak1-563-17-3-2.21829633820504-3.11807310444576	chr1	194661841	194662661	+	0	NA	Intergenic	Intergenic	-5648	NR_040468	73455	Mm.414869	NR_040468		1700065J18Rik	-	RIKEN cDNA 1700065J18 gene	ncRNA
common_peak1-12564-40-115--1.19900531237647-5.8003972828958	chr18	10181297	10182174	+	0	NA	promoter-TSS (NM_009071)	promoter-TSS (NM_009071)	55	NM_009071	19877	Mm.6710	NM_009071	ENSMUSG00000024290	Rock1	1110055K06Rik|Rock-I	Rho-associated coiled-coil containing protein kinase 1	protein-coding
common_peak1-8698-36-22-0.955759130110741-2.05089002217436	chr11	72465993	72467358	+	0	NA	intron (NM_025985, intron 1 of 5)	intron (NM_025985, intron 1 of 5)	-36829	NM_009671	11736	Mm.10313	NM_009671	ENSMUSG00000020790	Ankfy1	Ankhzn|ZFYVE14|mKIAA1255	ankyrin repeat and FYVE domain containing 1	protein-coding
common_peak2-21014-34-35-0.212143525558954-0.439405572480892	chr11	29547311	29548637	+	0	NA	Intergenic	Intergenic	-44924	NM_194053	68585	Mm.192580	NM_024226	ENSMUSG00000020458	Rtn4	1110020G17Rik|AA407876|AA409940|AA960376|ASY|C130026I10Rik|NOGO|NSP-CL|NgA|Nogo-A|Nogo-B|Nogo-C|mKIAA0886|mKIAA4153	reticulon 4	protein-coding
unique_peak2-38916-6-7--0.434601889619698-0.97990265578305	chr8	14817745	14818166	+	0	NA	intron (NM_172910, intron 9 of 15)	intron (NM_172910, intron 9 of 15)	-70581	NM_012000	26889	Mm.254027	NM_012000	ENSMUSG00000026317	Cln8	mnd	ceroid-lipofuscinosis, neuronal 8	protein-coding
common_peak2-30525-13-11-0.193509529916613-0.379391706698377	chr7	66451297	66451959	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-32492	NM_173010	22215	Mm.9002	NM_011668	ENSMUSG00000025326	Ube3a	4732496B02|5830462N02Rik|A130086L21Rik|Hpve6a|mKIAA4216	ubiquitin protein ligase E3A	protein-coding
unique_peak1-5104-8-1-2.00522241794757-2.05605744720049	chr4	150797392	150797849	+	0	NA	intron (NM_001081557, intron 5 of 23)	intron (NM_001081557, intron 5 of 23)	-365558	NM_009498	22319	Mm.273930	NM_009498	ENSMUSG00000028955	Vamp3	D130027G05Rik|VAMP-3|ceb	vesicle-associated membrane protein 3	protein-coding
unique_peak1-3078-15-2-2.4272022498345-3.53487848679804	chr18	21084154	21084930	+	0	NA	Intergenic	Intergenic	-18584	NM_026301	67664	Mm.45980	NM_026301	ENSMUSG00000033107	Rnf125	4930553F04Rik	ring finger protein 125	protein-coding
common_peak1-8711-24-8-1.6232849013254-2.85636458546265	chr11	96746792	96748030	+	0	NA	Intergenic	Intergenic	30384	NM_030248	80280	Mm.28297	NM_030248	ENSMUSG00000018669	Cdk5rap3	1810007E24Rik|BC002318|C53|C81486|HSF-27|IC53|MST016	CDK5 regulatory subunit associated protein 3	protein-coding
common_peak1-10626-25-64--1.16051790768335-3.23296565093675	chr14	37134481	37135357	+	0	NA	Intergenic	Lx8|LINE|L1	226768	NM_175008	218921	Mm.212464	NM_175008	ENSMUSG00000096405	4930474N05Rik	-	RIKEN cDNA 4930474N05 gene	protein-coding
unique_peak1-7123-17-2-2.63333383748388-3.75443312462699	chr9	47076942	47077717	+	0	NA	Intergenic	Intergenic	-261106	NM_207675	54725	Mm.234832	NM_018770	ENSMUSG00000032076	Cadm1	2900073G06Rik|3100001I08Rik|AI987920|Bl2|Igsf4|Igsf4a|Necl2|RA175|RA175A|RA175B|RA175C|RA175N|ST17|SgIGSF|SynCam|Tslc1	cell adhesion molecule 1	protein-coding
unique_peak1-3145-8-2-1.42025991722641-1.65811743852845	chr18	36500590	36501071	+	0	NA	Intergenic	Intergenic	-7448	NM_001081365	66060	Mm.272527	NM_001081365		Cystm1	0610010O12Rik	cysteine-rich transmembrane module containing 1	protein-coding
common_peak1-7929-16-13-0.310908720210457-0.417187467413082	chr1	150098580	150099216	+	0	NA	Intergenic	L1_Mus3|LINE|L1	1709516	NM_008869	18783	Mm.4186	NM_008869	ENSMUSG00000056220	Pla2g4a	Pla2g4|cPLA2|cPLA2alpha	phospholipase A2, group IVA (cytosolic, calcium-dependent)	protein-coding
common_peak1-9835-56-83--0.156721597339518-0.389025993365906	chr12	76369061	76371140	+	0	NA	Intergenic	Intergenic	-39200	NM_023275	80837	Mm.27467	NM_023275	ENSMUSG00000046768	Rhoj	1110005O19Rik|AW210585|Arhj|TC10L|TCL	ras homolog gene family, member J	protein-coding
common_peak2-20454-9-20--1.20270401637454-1.23014042908325	chr10	40883467	40884061	+	0	NA	Intergenic	(TTC)n|Simple_repeat|Simple_repeat	-92374	NM_199058	140741	Mm.290693	NM_199058	ENSMUSG00000046922	Gpr6	AI852874|Gm233	G protein-coupled receptor 6	protein-coding
common_peak2-20521-9-13--0.617741515653384-0.459837087125828	chr10	61476076	61476700	+	0	NA	Intergenic	PB1D9|SINE|Alu	-34532	NM_007731	12817	Mm.300931	NM_007731	ENSMUSG00000058806	Col13a1	-	collagen, type XIII, alpha 1	protein-coding
common_peak2-22386-18-7-1.31291915122835-1.71830443967823	chr13	31578193	31578564	+	0	NA	Intergenic	Intergenic	-71661	NM_008239	15220	Mm.44235	NM_008239	ENSMUSG00000038415	Foxq1	HFH-1|Hfh1|Hfh1l|sa	forkhead box Q1	protein-coding
common_peak1-18434-143-165-0.482478667630513-2.76817037929091	chr8	79208503	79210839	+	0	NA	Intergenic	Intergenic	214401	NR_028579	100039211	Mm.367571	NR_028579	ENSMUSG00000074235	Gm10649	ENSMUSG00000074235	predicted gene 10649	ncRNA
unique_peak2-39850-5-7--0.704380336005853-1.01466476204226	chrX	70364542	70365046	+	0	NA	intron (NM_001025384, intron 1 of 4).2	intron (NM_001025384, intron 1 of 4).2	-1753	NM_001045539	574438	Mm.435653	NM_001045539	ENSMUSG00000058328	Xlr5a	Xlr5d	X-linked lymphocyte-regulated 5A	protein-coding
unique_peak2-34134-4-5--0.608423014574403-0.909929411522249	chr13	23431189	23431605	+	0	NA	Intergenic	B3A|SINE|B2	29680	NM_001286156	218100	Mm.286454	NM_172586	ENSMUSG00000046351	Zfp322a	Znf322|Znf322a	zinc finger protein 322A	protein-coding
common_peak2-28823-11-8-0.338768582809301-1.14218153353838	chr5	66040714	66041134	+	0	NA	intron (NM_001081321, intron 13 of 31)	intron (NM_001081321, intron 13 of 31)	48171	NM_001081321	71521	Mm.278974	NM_027818	ENSMUSG00000029202	Pds5a	9030416H16Rik|E230024D05Rik|mKIAA0648	PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	protein-coding
unique_peak2-35444-1-10--3.08648862885404-2.57096726280955	chr17	35517042	35517476	+	0	NA	intron (NM_001143689, intron 2 of 5)	CpG-6323	697	NM_001143689	15015	Mm.464284	NM_001143689	ENSMUSG00000035929	H2-Q4	H-2Q4|H2-Gs10|Qa-4|Qa4|Qat-4|Qb-1|Qb1	histocompatibility 2, Q region locus 4	protein-coding
unique_peak2-33133-4-27--2.83081543591085-4.45580894998946	chr10	81930104	81930996	+	0	NA	Intergenic	Lx2B|LINE|L1	24813	NM_001255990	432480	Mm.280394	NM_001255990	ENSMUSG00000094186	Gm1553	Lcrn	predicted gene 1553	protein-coding
unique_peak2-35600-6-6--0.241956811677302-0.947717972411649	chr17	79342704	79343087	+	0	NA	intron (NM_028611, intron 6 of 9)	intron (NM_028611, intron 6 of 9)	6420	NM_028611	73694	Mm.104959	NM_028611	ENSMUSG00000024082	Ndufaf7	2410091C18Rik|AL033374|PRO1853	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex assembly factor 7	protein-coding
common_peak1-7725-49-49-0.362427633250459-0.734681648433366	chr1	88436306	88437775	+	0	NA	Intergenic	Intergenic	13729	NM_008972	19231	Mm.19187	NM_008972	ENSMUSG00000026238	Ptma	Thym	prothymosin alpha	protein-coding
common_peak1-8300-44-47-0.236930333847379-0.510148353955622	chr10	34483443	34484725	+	0	NA	Intergenic	MusHAL1|LINE|L1	280878	NM_010237	14302	Mm.332432	NM_010237	ENSMUSG00000019779	Frk	BSK|BSK/IYK|C85044|GTK|RAK	fyn-related kinase	protein-coding
common_peak2-20936-14-8-0.729291158915332-0.771068449301682	chr11	8624311	8624809	+	0	NA	Intergenic	Intergenic	-60022	NM_001083587	319939	Mm.337820	NM_001083587	ENSMUSG00000020422	Tns3	BC023928|F830010I22Rik|TEM6|Tens1	tensin 3	protein-coding
common_peak2-28566-43-177--1.69317024544269-14.9579925632421	chr5	5693372	5694788	+	0	NA	promoter-TSS (NM_001103157)	promoter-TSS (NM_001103157)	9	NM_001285471	74051	Mm.274956	NM_028734	ENSMUSG00000015653	Steap2	4921538B17Rik|AI930049|AW045895|IPCA-1|IPCA1|PCANAP1|STAMP1|STMP	six transmembrane epithelial antigen of prostate 2	protein-coding
common_peak1-9702-9-12--0.510826311736872-0.394412252720706	chr12	25099136	25099474	+	0	NA	Intergenic	Intergenic	-84141	NM_020614	21340	Mm.39082	NM_020614	ENSMUSG00000059669	Taf1b	4930408G01Rik|A230108M10Rik|TAFI68|Tafi86	TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B	protein-coding
common_peak1-15889-11-9-0.186765489364251-0.344532117358383	chr5	12383432	12384048	+	0	NA	intron (NM_028882, intron 1 of 17)	intron (NM_028882, intron 1 of 17)	574	NM_028882	108151	Mm.89313	NM_028882	ENSMUSG00000040254	Sema3d	4631426B19Rik	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D	protein-coding
common_peak1-7663-11-17--0.661231417190699-0.58239619684445	chr1	74587469	74588095	+	0	NA	intron (NM_176972, intron 1 of 25)	intron (NM_176972, intron 1 of 25)	-1681	NM_001081456	18802	Mm.290731	NM_148937	ENSMUSG00000026173	Plcd4	4921507K24Rik	phospholipase C, delta 4	protein-coding
common_peak1-18060-91-151--0.174495567841247-0.495501068750785	chr8	80737918	80740364	+	0	NA	intron (NM_183096, intron 2 of 13)	intron (NM_183096, intron 2 of 13)	1900	NM_183096	73301	Mm.61243	NM_183096	ENSMUSG00000037101	Ttc29	1700031F13Rik	tetratricopeptide repeat domain 29	protein-coding
unique_peak2-34106-11-40--1.84885842036647-4.10519998339124	chr13	16016547	16018285	+	0	NA	Intergenic	RLTR15|LTR|ERVK	-88892	NM_008380	16323	Mm.8042	NM_008380	ENSMUSG00000041324	Inhba	-	inhibin beta-A	protein-coding
common_peak2-28649-18-29--0.593971444380167-0.662033714151235	chr5	30888559	30889587	+	0	NA	intron (NR_040427, intron 1 of 3)	intron (NR_040427, intron 1 of 3)	-1470	NM_010608	16527	Mm.439936	NM_010608	ENSMUSG00000049265	Kcnk3	TASK|Task-1|cTBAK-1	potassium channel, subfamily K, member 3	protein-coding
common_peak2-19620-7-7--0.200909169701811-0.97990265578305	chr1	36546703	36547193	+	0	NA	intron (NM_033570, intron 1 of 6)	intron (NM_033570, intron 1 of 6)	18506	NM_033570	94220	Mm.422638	NM_033570	ENSMUSG00000037408	Cnnm4	5430430O18Rik|Acdp4	cyclin M4	protein-coding
common_peak1-9527-13-10-0.319040412000471-0.446472590016315	chr11	115956843	115957446	+	0	NA	Intergenic	Intergenic	-8866	NM_016852	22378	Mm.284792	NM_016852	ENSMUSG00000034341	Wbp2	-	WW domain binding protein 2	protein-coding
common_peak2-26833-17-9-0.896368243317676-1.09394599973099	chr2	152821127	152821614	+	0	NA	intron (NM_001083618, intron 10 of 14)	B1_Mus1|SINE|Alu	19749	NM_178939	68559	Mm.12746	NM_178939	ENSMUSG00000027472	Pdrg1	1110004D19Rik|AU020945|AV006589|Pdrg	p53 and DNA damage regulated 1	protein-coding
unique_peak2-34555-5-8--0.874305337448166-1.10484139239135	chr14	63859642	63860291	+	0	NA	exon (NM_008092, exon 2 of 7)	exon (NM_008092, exon 2 of 7)	4131	NM_008092	14463	Mm.247669	NM_008092	ENSMUSG00000021944	Gata4	Gata-4	GATA binding protein 4	protein-coding
common_peak2-25084-116-159-0.172201238622058-0.583694520455673	chr18	36280374	36281699	+	0	NA	intron (NM_001167891, intron 1 of 9)	MIR3|SINE|MIR	15179	NR_015571	74966	Mm.379238	NM_030089		4930471G03Rik	1700007N01Rik	RIKEN cDNA 4930471G03 gene	ncRNA
common_peak2-20450-18-38--0.972483067633897-1.53432270224293	chr10	40338879	40339993	+	0	NA	Intergenic	L1_Rod|LINE|L1	-10381	NM_027442	70503	Mm.252862	NM_027442	ENSMUSG00000063428	Ddo	5330420D20Rik|5730402C02Rik|AI467244	D-aspartate oxidase	protein-coding
common_peak2-23732-95-112-0.327736382608826-1.07224831430528	chr15	96459725	96460913	+	0	NA	intron (NM_001166458, intron 1 of 15)	intron (NM_001166458, intron 1 of 15)	12074	NM_134086	105727	Mm.103568	NM_134086	ENSMUSG00000023169	Slc38a1	AA408026|AA409865|AL022800|AU015942|NAT2	solute carrier family 38, member 1	protein-coding
unique_peak1-3088-12-5-1.06381348436648-1.78669045979184	chr18	24653764	24654243	+	0	NA	intron (NM_144861, intron 6 of 6)	L1Md_T|LINE|L1	24631	NM_026529	68046	Mm.276574	NM_026529	ENSMUSG00000024273	2700062C07Rik	AI195775|C87515	RIKEN cDNA 2700062C07 gene	protein-coding
common_peak1-11964-10-4-1.03448725012141-1.5150158574804	chr17	6744186	6744580	+	0	NA	Intergenic	Intergenic	-62005	NM_001166627	100040531	Mm.457987	NM_001166627	ENSMUSG00000095677	Dynlt1f	100040631|Dynlt1e	dynein light chain Tctex-type 1F	protein-coding
common_peak1-15878-133-249--0.234226699978779-0.910788244782815	chr5	8055676	8057570	+	0	NA	promoter-TSS (NM_001080974)	promoter-TSS (NM_001080974)	81	NM_001080974	109552	Mm.96211	NM_025618	ENSMUSG00000003161	Sri	2210417O06Rik|2900070H08Rik|Sor	sorcin	protein-coding
unique_peak1-6415-10-1-2.35641534500877-2.57096726280955	chr7	84188044	84188560	+	0	NA	intron (NM_001199224, intron 22 of 22)	L1MC1|LINE|L1	813529	NM_001199224	244071	Mm.322829	NM_172902	ENSMUSG00000025754	Agbl1	Ccp4|D430020F16|EG244071|Nna1-l1	ATP/GTP binding protein-like 1	protein-coding
unique_peak1-7341-9-0-3.18961340640422-3.01029995663981	chrX	98910058	98910629	+	0	NA	Intergenic	L1Md_T|LINE|L1	19143	NM_009910	12766	Mm.12876	NM_009910	ENSMUSG00000050232	Cxcr3	Cd183|Cmkar3	chemokine (C-X-C motif) receptor 3	protein-coding
unique_peak1-4214-7-0-2.79909083029819-2.40823996531185	chr2	119811851	119812375	+	0	NA	intron (NM_011941, intron 1 of 29)	ID_B1|SINE|B4	13678	NM_011941	26390	Mm.330501	NM_011941	ENSMUSG00000033902	Mapkbp1	2810483F24Rik|AW123212|JNKBP-1|Jnkbp1|mKIAA0596	mitogen-activated protein kinase binding protein 1	protein-coding
unique_peak1-6939-8-4-0.683294323060208-1.21878474469819	chr8	109945746	109946258	+	0	NA	intron (NM_026277, intron 2 of 8)	intron (NM_026277, intron 2 of 8)	2936	NM_026277	67619	Mm.334793	NM_026277	ENSMUSG00000003848	Nob1	1700021I09Rik|ART-4|Nob1p|Psmd8bp1	NIN1/RPN12 binding protein 1 homolog (S. cerevisiae)	protein-coding
common_peak2-26233-18-9-0.990991056340989-1.23014042908325	chr2	28468073	28468497	+	0	NA	intron (NM_001160406, intron 5 of 6)	intron (NM_001160406, intron 5 of 6)	9217	NM_008114	14582	Mm.373385	NM_008114	ENSMUSG00000026815	Gfi1b	Gfi-1B	growth factor independent 1B	protein-coding
common_peak2-22084-17-18--0.0296311752385474-0.306899554715732	chr12	78861660	78862331	+	0	NA	Intergenic	MLT1H|LTR|MaLR	350867	NM_001252616	53618	Mm.35628	NM_016893	ENSMUSG00000021065	Fut8	-	fucosyltransferase 8	protein-coding
common_peak2-23335-16-12-0.417823924126969-0.489164546851866	chr15	38384346	38384924	+	0	NA	Intergenic	Intergenic	35667	NR_105916	102465574		NR_105916		Mir6951	mmu-mir-6951	microRNA mir-6951	ncRNA
unique_peak2-33672-6-7--0.434601889619698-0.97990265578305	chr11	101425075	101425486	+	0	NA	intron (NM_001252222, intron 7 of 22)	intron (NM_001252222, intron 7 of 22)	11312	NM_001252223	17966	Mm.784	NM_008676	ENSMUSG00000017119	Nbr1	mKIAA0049	neighbor of Brca1 gene 1	protein-coding
unique_peak1-2103-12-2-2.06381348436648-2.79529063155376	chr15	39479779	39480076	+	0	NA	intron (NM_053271, intron 22 of 26)	MT2B|LTR|ERVL	-11130	NM_001256384	116838	Mm.309296	NM_053271		Rims2	2810036I15Rik|AW048769|RIM2|Rab3ip2|Rim2(+40A)|Rim2(+44A)|Rim2(+4A)|Serg2|Syt3-rs|mKIAA0751	regulating synaptic membrane exocytosis 2	protein-coding
common_peak2-22268-4-7--1.02346051385325-1.09384600808989	chr13	6009871	6010210	+	0	NA	Intergenic	Intergenic	149305	NM_011803	23849	Mm.275036	NM_011803	ENSMUSG00000000078	Klf6	AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9	Kruppel-like factor 6	protein-coding
common_peak1-13574-13-7-0.778472030637769-0.817533494790411	chr2	11776766	11777323	+	0	NA	Intergenic	Intergenic	77664	NM_177268	320816	Mm.260201	NM_177268		Ankrd16	2810455F06Rik|AI646698|D430029B21Rik	ankyrin repeat domain 16	protein-coding
unique_peak2-39537-4-6--0.830815435910851-0.989110657569874	chr9	67006051	67006454	+	0	NA	intron (NR_045748, intron 2 of 2)	intron (NR_045748, intron 2 of 2)	24884	NR_045748	100502636	Mm.412607	NR_045748		Gm19299	-	predicted gene, 19299	ncRNA
common_peak1-9509-60-31-1.35429186162053-5.48450379639465	chr11	114668443	114670027	+	0	NA	Intergenic	Intergenic	8997	NM_181749	217302	Mm.269127	NM_181749	ENSMUSG00000034677	Gpr142	PGR2	G protein-coupled receptor 142	protein-coding
common_peak2-32144-21-32--0.474904854092218-0.550049347815239	chr9	108002537	108003203	+	0	NA	intron (NM_007567, intron 11 of 11)	intron (NM_007567, intron 11 of 11)	-6059	NM_146226	235606	Mm.219639	NM_146226	ENSMUSG00000032590	Apeh	-	acylpeptide hydrolase	protein-coding
common_peak1-18464-17-23--0.366666162516118-0.383878263347744	chr8	84249091	84249844	+	0	NA	intron (NM_001024617, intron 3 of 24)	L1Md_T|LINE|L1	383006	NM_001297593	234515	Mm.324468	NM_001024617	ENSMUSG00000037940	Inpp4b	E130107I17Rik	inositol polyphosphate-4-phosphatase, type II	protein-coding
common_peak1-18890-18-20--0.0793982715504091-0.301029995663976	chr9	35211029	35211913	+	0	NA	Intergenic	RSINE1|SINE|B4	-48190	NM_021339	57810	Mm.80509	NM_021339	ENSMUSG00000038119	Cdon	CDO|Cd0|Orcam	cell adhesion molecule-related/down-regulated by oncogenes	protein-coding
common_peak2-19781-49-67--0.0811790182251553-0.315949812664558	chr1	82839196	82840490	+	0	NA	intron (NM_010472, intron 1 of 12)	intron (NM_010472, intron 1 of 12)	3785	NM_010472	15463	Mm.392569	NM_010472	ENSMUSG00000026159	Agfg1	AU045498|C130049H11Rik|C85612|D730048C23Rik|Hrb|RAB|Rip	ArfGAP with FG repeats 1	protein-coding
common_peak1-17286-15-12-0.311725032414564-0.425539671739611	chr6	135361948	135362788	+	0	NA	Intergenic	Intergenic	44857	NM_001288627	13730	Mm.182785	NM_010128	ENSMUSG00000030208	Emp1	I-8-09|TMP	epithelial membrane protein 1	protein-coding
common_peak2-28772-27-24-0.347689761120511-0.550049347815233	chr5	52741519	52742210	+	0	NA	Intergenic	Intergenic	-13179	NM_011435	20657	Mm.2407	NM_011435		Sod3	AI314465|EC-SOD	superoxide dismutase 3, extracellular	protein-coding
unique_peak1-3637-12-2-2.06381348436648-2.79529063155376	chr19	38015879	38016461	+	0	NA	intron (NM_001099634, intron 28 of 52)	MTD|LTR|MaLR	101897	NM_001099634	226101	Mm.34674	NM_177035	ENSMUSG00000048612	Myof	2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3	myoferlin	protein-coding
common_peak1-13085-21-13-0.762134343208631-1.0220094258199	chr19	6980053	6981098	+	0	NA	TTS (NM_012021)	TTS (NM_012021)	3560	NM_012021	54683	Mm.279782	NM_012021		Prdx5	AOEB166|AOPP|Pmp20|Prdx6|PrxV	peroxiredoxin 5	protein-coding
common_peak2-19606-23-22-0.198205548452068-0.373496418836697	chr1	34011496	34012235	+	0	NA	intron (NM_001276764, intron 2 of 102)	Lx9|LINE|L1	46795	NM_001276764	13518	Mm.336625	NM_010081	ENSMUSG00000026131	Dst	2310001O04Rik|A830042E19Rik|AW554249|BP230|BPAG1-n|Bpag|Bpag1|Macf2|ah|athetoid|dt|mKIAA0728|nmf203|nmf339	dystonin	protein-coding
common_peak2-28041-17-27--0.589058583852566-0.604689589251113	chr4	57797519	57798069	+	0	NA	Intergenic	Intergenic	-60326	NM_009649	11641	Mm.467752	NM_009649	ENSMUSG00000038729	Akap2	AA959716|AI649048|Akap-2|Akap-kl|B230340M18Rik|Prka2	A kinase (PRKA) anchor protein 2	protein-coding
common_peak1-9868-8-2-1.42025991722641-1.65811743852845	chr12	81485220	81485674	+	0	NA	intron (NM_177267, intron 5 of 8)	intron (NM_177267, intron 5 of 8)	7217	NR_037207	100526530		NR_037207		Mir1843a	Mir1843|mmu-mir-1843|mmu-mir-1843a	microRNA 1843a	ncRNA
common_peak1-12504-64-96--0.134466440478525-0.376583285095203	chr17	88629329	88630911	+	0	NA	Intergenic	Intergenic	105268	NM_001190356	225058	Mm.312053	NM_001190356		Gm4832	EG225058	predicted gene 4832	protein-coding
unique_peak2-37610-8-15--0.994777582052429-0.771068449301683	chr5	64360313	64360850	+	0	NA	promoter-TSS (NM_145923)	promoter-TSS (NM_145923)	-445	NM_145923	100532	Mm.243632	NM_145923	ENSMUSG00000047881	Rell1	AA536743	RELT-like 1	protein-coding
common_peak2-28264-21-31--0.430510734733764-0.49501414494053	chr4	126753001	126754068	+	0	NA	Intergenic	Intergenic	-1093	NM_001285885	100177	Mm.276096	NM_177462	ENSMUSG00000042408	Zmym6	9330177P20Rik|AI593204|AI661340|D4Wsu24e|Zfp258	zinc finger, MYM-type 6	protein-coding
common_peak2-29684-43-53-0.0276756833602345-0.309072945808617	chr6	72548403	72550127	+	0	NA	promoter-TSS (NM_144917)	promoter-TSS (NM_144917)	643	NM_026159	67442	Mm.305108	NM_026159	ENSMUSG00000056666	Retsat	0610039N19Rik|C80029|MMT-7|Ppsig	retinol saturase (all trans retinol 13,14 reductase)	protein-coding
unique_peak2-37219-2-6--1.72480917832092-1.26211192963361	chr4	88031798	88032246	+	0	NA	intron (NM_001081184, intron 35 of 43)	intron (NM_001081184, intron 35 of 43)	52808	NM_025760	66775	Mm.386788	NM_025760	ENSMUSG00000028497	Ptplad2	4933428I03Rik|HACD4	protein tyrosine phosphatase-like A domain containing 2	protein-coding
common_peak2-21816-8-8--0.164702583494742-1.00793137938329	chr11	119128445	119128831	+	0	NA	promoter-TSS (NM_001159324)	promoter-TSS (NM_001159324)	-643	NM_001159324	14387	Mm.4793	NM_008064	ENSMUSG00000025579	Gaa	E430018M07Rik	glucosidase, alpha, acid	protein-coding
common_peak2-30387-15-55--1.79519017150195-5.22068457343052	chr7	29982901	29984455	+	0	NA	intron (NM_001164658, intron 9 of 27)	intron (NM_001164658, intron 9 of 27)	15374	NM_001164658	320225	Mm.349382	NM_001039721	ENSMUSG00000049676	Catsperg1	A230107C01Rik|Catsperg	catsper channel auxiliary subunit gamma 1	protein-coding
common_peak2-31458-9-6-0.382258484346616-1.11707584880836	chr8	105387441	105387867	+	0	NA	Intergenic	Intergenic	-78643	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
unique_peak2-39392-6-8--0.60452689106201-1.03789460276074	chr9	23567578	23568168	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	-334589	NM_175678	319239	Mm.130824	NM_175678	ENSMUSG00000043659	Npsr1	9330128H10Rik|GPRA|Gpr154|MVTR|PGR14|VRR1	neuropeptide S receptor 1	protein-coding
unique_peak2-36042-4-7--1.02346051385325-1.09384600808989	chr19	44562788	44563198	+	0	NA	Intergenic	B3A|SINE|B2	-4969	NM_011720	22423	Mm.88365	NM_011720	ENSMUSG00000036961	Wnt8b	-	wingless-type MMTV integration site family, member 8B	protein-coding
unique_peak2-35540-4-7--1.02346051385325-1.09384600808989	chr17	56762100	56762527	+	0	NA	intron (NM_028782, intron 2 of 17)	intron (NM_028782, intron 2 of 17)	4013	NM_028782	74142	Mm.329136	NM_028782	ENSMUSG00000041168	Lonp1	1200017E13Rik|LON|Prss15	lon peptidase 1, mitochondrial	protein-coding
unique_peak2-35912-2-9--2.23938235115068-1.87199725847353	chr19	5071667	5072139	+	0	NA	Intergenic	Intergenic	3825	NM_054042	70445	Mm.29597	NM_054042	ENSMUSG00000056481	Cd248	2610111G01Rik|AI842296|Cd164l1|Tem1	CD248 antigen, endosialin	protein-coding
common_peak1-15751-11-18--0.739233929191972-0.671582559449692	chr4	150008433	150009121	+	0	NA	intron (NM_173774, intron 6 of 8)	intron (NM_173774, intron 6 of 8)	17506	NM_173774	242773	Mm.29280	NM_173774		Slc45a1	C230078B22|Dnb5	solute carrier family 45, member 1	protein-coding
common_peak2-28006-17-26--0.53659116395843-0.538442145997695	chr4	46138175	46139235	+	0	NA	intron (NM_173033, intron 4 of 9)	intron (NM_173033, intron 4 of 9)	12642	NM_173033	272027	Mm.331588	NM_173033	ENSMUSG00000035495	Tstd2	3010020C06	thiosulfate sulfurtransferase (rhodanese)-like domain containing 2	protein-coding
common_peak2-24562-44-77--0.463509384293713-0.951659045366392	chr17	28951767	28953603	+	0	NA	intron (NM_001081315, intron 4 of 12)	intron (NM_001081315, intron 4 of 12)	14614	NM_001081315	268936	Mm.291877	NM_199061	ENSMUSG00000063952	Brpf3	AI413466|AW493400|mKIAA1286	bromodomain and PHD finger containing, 3	protein-coding
common_peak2-28433-7-8--0.370834171144123-1.00793137938329	chr4	148820624	148821032	+	0	NA	Intergenic	Intergenic	8249	NM_022020	63954	Mm.46023	NM_022020	ENSMUSG00000028996	Rbp7	1110002J23Rik|CRBP-III	retinol binding protein 7, cellular	protein-coding
common_peak1-13221-16-17--0.0516613591742505-0.301029995663984	chr19	24342315	24343013	+	0	NA	intron (NM_008044, intron 3 of 4)	intron (NM_008044, intron 3 of 4)	12412	NM_008044	14297	Mm.7319	NM_008044	ENSMUSG00000059363	Fxn	FA|FARR|Frda|X25	frataxin	protein-coding
unique_peak2-38074-13-7-0.778472030637769-0.817533494790411	chr6	50394500	50394858	+	0	NA	intron (NM_001163645, intron 1 of 21)	intron (NM_001163645, intron 1 of 21)	11490	NM_001163645	71720	Mm.44153	NM_027881	ENSMUSG00000029822	Osbpl3	1200014M06Rik|6720421I08Rik|A530055M08|ORP3|OSBP3	oxysterol binding protein-like 3	protein-coding
common_peak1-15277-10-6-0.549060422951165-1.21398586181642	chr4	39088776	39089292	+	0	NA	Intergenic	L1VL4|LINE|L1	-308292	NM_001081095	75471	Mm.23522	NM_001081095	ENSMUSG00000028287	1700009N14Rik	AI429145	RIKEN cDNA 1700009N14 gene	protein-coding
unique_peak1-6879-9-4-0.867685311516858-1.36011389749466	chr8	91416379	91417031	+	0	NA	Intergenic	Intergenic	-131929	NR_106190	102465899		NR_106190	miRBase:MI0026042	Mir8110	mmu-mir-8110	microRNA mir-8110	ncRNA
unique_peak1-310-30-6-2.36232048743427-5.46361714676356	chr1	130461878	130463259	+	0	NA	Intergenic	Intergenic	26308	NM_009911	12767	Mm.1401	NM_009911	ENSMUSG00000045382	Cxcr4	CD184|Cmkar4|LESTR|PB-CKR|PBSF/SDF-1|Sdf1r|b2b220Clo	chemokine (C-X-C motif) receptor 4	protein-coding
common_peak1-10407-10-6-0.549060422951165-1.21398586181642	chr13	98122048	98122566	+	0	NA	Intergenic	Intergenic	-82618	NR_110432	100039691	Mm.219358	NR_110430		Lincenc1	ENSMUSG00000078952|Gm11019|Gm2373|linc-Enc1	long intergenic non-coding RNA, embryonic stem cells expressed 1	ncRNA
unique_peak2-32822-11-14--0.398197011356905-0.379391706698377	chr1	186585286	186585941	+	0	NA	Intergenic	Intergenic	-29241	NM_008250	15284	Mm.1347	NM_008250	ENSMUSG00000039377	Hlx	Hlx1	H2.0-like homeobox	protein-coding
common_peak2-25338-29-49--0.531566109159614-0.810079075897175	chr18	76943726	76944437	+	0	NA	Intergenic	Intergenic	-151063	NM_001109743	664805	Mm.329543	NM_001109743	ENSMUSG00000091519	Skor2	Corl2|EG664805|Fussel18|Gm7348	SKI family transcriptional corepressor 2	protein-coding
common_peak1-8787-30-14-1.26278481388335-2.47671208917977	chr11	12410678	12412033	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-46392	NM_001282993	12808	Mm.22847	NM_172496	ENSMUSG00000020173	Cobl	-	cordon-bleu WH2 repeat	protein-coding
unique_peak2-38646-5-7--0.704380336005853-1.01466476204226	chr7	90284152	90284603	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-164476	NR_045855	71285	Mm.76818	NR_045855		4933430H16Rik	-	RIKEN cDNA 4933430H16 gene	ncRNA
unique_peak1-111-10-2-1.77145284428761-2.09384600808989	chr1	58794610	58795098	+	0	NA	intron (NM_207653, intron 6 of 9)	intron (NM_207653, intron 6 of 9)	7458	NM_001293805	12633	Mm.336848	NM_009805	ENSMUSG00000026031	Cflar	2310024N18Rik|A430105C05Rik|CLARP|Cash|Casper|ENSMUSG00000072980|FLAME|FLAME-1|Flip|Gm9845|I-FLICE|MRIT|c-Flip	CASP8 and FADD-like apoptosis regulator	protein-coding
unique_peak1-134-8-0-3.00522241794757-2.70926996097583	chr1	64994096	64994485	+	0	NA	intron (NM_001039493, intron 1 of 7)	intron (NM_001039493, intron 1 of 7)	9108	NM_001039493	241075	Mm.239534	NM_175509	ENSMUSG00000051344	Plekhm3	9430067K14Rik|A230102O09Rik|AI449570|DAPR|Plekhm1l	pleckstrin homology domain containing, family M, member 3	protein-coding
common_peak1-15059-8-8--0.164702583494742-1.00793137938329	chr3	123205015	123205470	+	0	NA	intron (NM_008939, intron 9 of 10)	L1_Mur1|LINE|L1	5742	NR_028573	100306957	Mm.260791	NR_028573	ENSMUSG00000092730	Snora24	ACA24	small nucleolar RNA, H/ACA box 24	snoRNA
common_peak2-27696-79-154--0.447289238097618-1.60228809506875	chr3	121645450	121648058	+	0	NA	Intergenic	Intergenic	-9490	NM_172525	214137	Mm.229287	NM_172525	ENSMUSG00000039831	Arhgap29	6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1	Rho GTPase activating protein 29	protein-coding
unique_peak2-39777-4-16--2.11092335510359-1.97518968347063	chrX	7898944	7899665	+	0	NA	Intergenic	Lx3_Mus|LINE|L1	-5246	NM_199064	385312	Mm.484393	NM_199064	ENSMUSG00000068219	Ssxb10	-	synovial sarcoma, X member B, breakpoint 10	protein-coding
unique_peak1-3522-14-6-1.09186123830004-1.16633110333236	chr19	18765750	18766389	+	0	NA	exon (NM_026120, exon 5 of 8)	exon (NM_026120, exon 5 of 8)	20799	NM_026120	67383	Mm.306602	NM_026120	ENSMUSG00000024726	2410127L17Rik	-	RIKEN cDNA 2410127L17 gene	protein-coding
common_peak1-15979-18-10-0.853487532591054-1.03889213727317	chr5	32034041	32034860	+	0	NA	intron (NM_181282, intron 3 of 11)	intron (NM_181282, intron 3 of 11)	34027	NM_181282	107976	Mm.482126	NM_144541	ENSMUSG00000052139	Bre	6030405P19Rik|AI429776|B830038C02Rik	brain and reproductive organ-expressed protein	protein-coding
unique_peak2-35636-1-6--2.43441193227435-1.56314192529759	chr17	87713775	87714089	+	0	NA	intron (NM_028639, intron 5 of 19)	intron (NM_028639, intron 5 of 19)	31706	NM_028639	225049	Mm.77396	NM_028639	ENSMUSG00000036918	Ttc7	1110035E02Rik|1700007L07Rik|Ttc7a|fsn|hea	tetratricopeptide repeat domain 7	protein-coding
common_peak2-22460-19-29--0.504203268946832-0.580176690544129	chr13	44939554	44940446	+	0	NA	intron (NM_021878, intron 3 of 18)	intron (NM_021878, intron 3 of 18)	113360	NM_001205043	16468	Mm.25059	NM_021878	ENSMUSG00000038518	Jarid2	Jmj|jumonji	jumonji, AT rich interactive domain 2	protein-coding
unique_peak1-6215-9-1-2.18961340640422-2.31132995230379	chr7	107691744	107692193	+	0	NA	Intergenic	Intergenic	6354	NM_183270	68185	Mm.228995	NM_183270		Coa4	5330414O08Rik|AI115477|AW047259|Chchd8|E2ig2	cytochrome c oxidase assembly factor 4	protein-coding
unique_peak2-38349-5-14--1.61127093161437-1.95509489018123	chr7	134184941	134185759	+	0	NA	intron (NM_145588, intron 1 of 13)	intron (NM_145588, intron 1 of 13)	584	NM_145588	110033	Mm.286488	NM_145588	ENSMUSG00000030677	Kif22	AU021460|C81217|Kid|Kif22a	kinesin family member 22	protein-coding
common_peak2-28007-14-15--0.100783839642355-0.301029995663982	chr4	46195817	46196491	+	0	NA	intron (NM_011728, intron 4 of 5)	intron (NM_011728, intron 4 of 5)	13029	NM_011728	22590	Mm.247036	NM_011728	ENSMUSG00000028329	Xpa	AI573865|Xpac	xeroderma pigmentosum, complementation group A	protein-coding
unique_peak1-2631-12-1-2.64877598508764-3.36932189928148	chr16	43130328	43130837	+	0	NA	intron (NM_001285805, intron 2 of 10)	intron (NM_001285805, intron 2 of 10)	-116815	NM_181058	56490	Mm.136238	NM_019778	ENSMUSG00000022708	Zbtb20	1300017A20Rik|7330412A13Rik|A930017C21Rik|D16Wsu73e|DPZF|HOF|ODA-8S|Oda8|Zfp288	zinc finger and BTB domain containing 20	protein-coding
common_peak2-28356-52-50-0.435834648294204-0.962598551638154	chr4	136143919	136145569	+	0	NA	intron (NM_133872, intron 2 of 18)	intron (NM_133872, intron 2 of 18)	13894	NM_133872	99982	Mm.28540	NM_133872	ENSMUSG00000036940	Kdm1a	1810043O07Rik|AA408884|Aof2|D4Ertd478e|Kdm1|Lsd1|mKIAA0601	lysine (K)-specific demethylase 1A	protein-coding
common_peak2-29026-97-89-0.692147975162607-3.23960926253066	chr5	113771127	113772154	+	0	NA	Intergenic	Intergenic	-4975	NR_106089	102466821		NR_106089		Mir7230	mmu-mir-7230	microRNA mir-7230	ncRNA
unique_peak2-33867-5-6--0.511735258063458-0.947717972411649	chr12	21285754	21286214	+	0	NA	intron (NM_008403, intron 1 of 6)	B3A|SINE|B2	6114	NM_008403	16413	Mm.273333	NM_008403	ENSMUSG00000062352	Itgb1bp1	AI449260|AU019480|Icap1	integrin beta 1 binding protein 1	protein-coding
common_peak2-25298-4-7--1.02346051385325-1.09384600808989	chr18	70643389	70643829	+	0	NA	intron (NM_001289649, intron 6 of 8)	intron (NM_001289649, intron 6 of 8)	11289	NM_001289650	170461	Mm.83623	NM_029019	ENSMUSG00000079608	Stard6	1700011K09Rik|4833424I06Rik|4933429L05Rik|AI644424	StAR-related lipid transfer (START) domain containing 6	protein-coding
common_peak1-9238-59-82--0.0496754304743465-0.306391792142995	chr11	86357064	86358680	+	0	NA	promoter-TSS (NM_001199046)	promoter-TSS (NM_001199046)	437	NM_028259	72508	Mm.394280	NM_028259	ENSMUSG00000020516	Rps6kb1	2610318I15Rik|4732464A07Rik|70kDa|AA959758|AI256796|AI314060|S6K1|p70/85s6k|p70s6k	ribosomal protein S6 kinase, polypeptide 1	protein-coding
unique_peak2-35535-2-12--2.61789397440441-2.55640854263862	chr17	56276319	56276808	+	0	NA	intron (NM_001130456, intron 1 of 16)	intron (NM_001130456, intron 1 of 16)	3203	NM_001130456	20359	Mm.8029	NM_013662	ENSMUSG00000001227	Sema6b	Sema|Seman|VIb|semaZ	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B	protein-coding
common_peak2-23135-22-16-0.559821263837065-0.733541631673787	chr14	101805715	101806390	+	0	NA	Intergenic	L1Md_F3|LINE|L1	202356	NM_001081278	210789	Mm.320639	NM_173380	ENSMUSG00000033083	Tbc1d4	5930406J04Rik|A930035N22|AV295684|As160	TBC1 domain family, member 4	protein-coding
common_peak2-32363-33-38-0.0459353436632801-0.312166972154323	chrX	98936584	98938092	+	0	NA	Intergenic	Intergenic	-7852	NM_009910	12766	Mm.12876	NM_009910	ENSMUSG00000050232	Cxcr3	Cd183|Cmkar3	chemokine (C-X-C motif) receptor 3	protein-coding
common_peak2-21809-11-11--0.0762689164695427-0.301029995663976	chr11	118428984	118429534	+	0	NA	intron (NM_001285436, intron 3 of 13)	intron (NM_001285436, intron 3 of 13)	90985	NM_172573	217364	Mm.473963	NM_172573	ENSMUSG00000033857	Engase	C130099A03|D230014K01Rik	endo-beta-N-acetylglucosaminidase	protein-coding
unique_peak1-6518-12-6-0.841421063030034-1.58711810488664	chr7	118584222	118584812	+	0	NA	Intergenic	L1Md_T|LINE|L1	-318328	NR_015573	75479	Mm.381620	NR_015573		1700012D14Rik	-	RIKEN cDNA 1700012D14 gene	ncRNA
common_peak1-9160-120-116-0.682596900908345-4.03938167234743	chr11	77784890	77787637	+	0	NA	intron (NM_001291225, intron 5 of 15)	intron (NM_001291225, intron 5 of 15)	-10055	NM_174852	268448	Mm.274329	NM_174852	ENSMUSG00000037791	Phf12	2410142K10Rik|F630045O13|PF1|mKIAA1523	PHD finger protein 12	protein-coding
unique_peak1-4208-8-4-0.683294323060208-1.21878474469819	chr2	119172745	119173120	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-4046	NM_026929	69065	Mm.35083	NM_026929	ENSMUSG00000027313	Chac1	1810008K03Rik	ChaC, cation transport regulator 1	protein-coding
unique_peak2-37631-6-11--1.01956439034085-1.32595962126035	chr5	72655372	72655920	+	0	NA	exon (NM_153389, exon 12 of 23)	exon (NM_153389, exon 12 of 23)	61064	NM_153389	231287	Mm.32775	NM_153389	ENSMUSG00000046808	Atp10d	9830145H18Rik|ATPVD|D5Buc24e	ATPase, class V, type 10D	protein-coding
unique_peak2-38448-9-8-0.0196884049619079-1.03275496310833	chr7	28349971	28350512	+	0	NA	intron (NM_175107, intron 5 of 9)	intron (NM_175107, intron 5 of 9)	4746	NM_001122767	66367	Mm.29831	NM_175107	ENSMUSG00000049643	2310022A10Rik	-	RIKEN cDNA 2310022A10 gene	protein-coding
common_peak1-9085-29-93--1.44229877106253-6.22128909350207	chr11	69758605	69759805	+	0	NA	exon (NM_009204, exon 6 of 11)	exon (NM_009204, exon 6 of 11)	2487	NM_009204	20528	Mm.10661	NM_009204	ENSMUSG00000018566	Slc2a4	Glut-4|Glut4	solute carrier family 2 (facilitated glucose transporter), member 4	protein-coding
common_peak2-30038-7-7--0.200909169701811-0.97990265578305	chr6	125540417	125540846	+	0	NA	intron (NM_011708, intron 8 of 51)	intron (NM_011708, intron 8 of 51)	37665	NM_011708	22371	Mm.22339	NM_011708	ENSMUSG00000001930	Vwf	6820430P06Rik|AI551257|B130011O06Rik|C630030D09|F8VWF|VWD	Von Willebrand factor homolog	protein-coding
unique_peak2-33252-4-6--0.830815435910851-0.989110657569874	chr10	127738424	127738933	+	0	NA	Intergenic	Intergenic	-1713	NM_133992	103135	Mm.244183	NM_133992	ENSMUSG00000005682	Pan2	1200014O24Rik|AI047843|AW742773|Usp52|mKIAA0710	PAN2 polyA specific ribonuclease subunit homolog (S. cerevisiae)	protein-coding
unique_peak2-32589-3-8--1.58390809140159-1.39487600375387	chr1	89580356	89580755	+	0	NA	intron (NR_122078, intron 9 of 27)	ORR1D1|LTR|MaLR	63668	NM_001110193	16331	Mm.15105	NM_010566	ENSMUSG00000026288	Inpp5d	SHIP|SHIP-1|SHIP1|SIP-145|p150Ship|s-SHIP	inositol polyphosphate-5-phosphatase D	protein-coding
common_peak2-21633-21-31--0.430510734733764-0.49501414494053	chr11	101253444	101254373	+	0	NA	Intergenic	(GA)n|Simple_repeat|Simple_repeat	24839	NM_144829	69684	Mm.146283	NM_144829	ENSMUSG00000075528	Aarsd1	1110069E20Rik|2310044P18Rik|AA589600|AlaX|AlaXp-II	alanyl-tRNA synthetase domain containing 1	protein-coding
common_peak2-23793-13-28--1.0795089644898-1.33403699391683	chr15	99725512	99726338	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-20038	NM_001113545	65970	Mm.33207	NM_023063	ENSMUSG00000023022	Lima1	Eplin	LIM domain and actin binding 1	protein-coding
unique_peak1-5726-30-3-3.16967540949187-7.44793394430711	chr6	43257073	43258295	+	0	NA	intron (NM_130869, intron 1 of 8)	intron (NM_130869, intron 1 of 8)	1869	NM_130869	18291	Mm.17715	NM_130869	ENSMUSG00000029736	Nobox	OG2|Og2x	NOBOX oogenesis homeobox	protein-coding
common_peak1-18098-28-32-0.00856500046300912-0.30437085424443	chr8	120668041	120669075	+	0	NA	Intergenic	Intergenic	-139097	NM_019707	12554	Mm.334841	NM_019707	ENSMUSG00000031841	Cdh13	4932416G01Rik|Cdht|T-cadherin|Tcad	cadherin 13	protein-coding
common_peak2-26909-42-57--0.115651667260388-0.318638672819228	chr2	160731026	160732372	+	0	NA	TTS (NM_022883)	TTS (NM_022883)	6376	NM_001291145	280635	Mm.330747	NM_182840	ENSMUSG00000050700	Emilin3	1110013O17Rik|EMILIN-3|EMILIN-5|EMILIN-T|Emilin5	elastin microfibril interfacer 3	protein-coding
common_peak1-8997-9-7-0.18961340640422-1.05908390183068	chr11	59964817	59965423	+	0	NA	intron (NM_009021, intron 2 of 5)	B2_Mm1t|SINE|B2	11536	NM_001037764	19377	Mm.296366	NM_009021	ENSMUSG00000062115	Rai1	Gt1	retinoic acid induced 1	protein-coding
unique_peak1-2530-26-7-1.92789909215846-3.64499996644214	chr16	21079945	21080836	+	0	NA	Intergenic	Intergenic	73627	NM_025634	66561	Mm.422867	NM_025634		2310042E22Rik	-	RIKEN cDNA 2310042E22 gene	protein-coding
common_peak1-12751-22-10-1.18785248645011-1.74319850844462	chr18	57837444	57838368	+	0	NA	intron (NM_029290, intron 6 of 6)	intron (NM_029290, intron 6 of 6)	-39667	NR_045360	70157	Mm.490532	NR_045360		2210409D07Rik	-	RIKEN cDNA 2210409D07 gene	ncRNA
common_peak2-23490-13-26--0.9764154715257-1.09492971584134	chr15	75867567	75868341	+	0	NA	Intergenic	Intergenic	-23188	NM_134087	105732	Mm.267178	NM_134087	ENSMUSG00000046761	Fam83h	AA409316	family with sequence similarity 83, member H	protein-coding
common_peak2-22845-15-6-1.20480982849805-1.32521814697968	chr14	21547503	21547855	+	0	NA	exon (NM_010811, exon 5 of 15)	exon (NM_010811, exon 5 of 15)	6105	NM_010811	17423	Mm.4084	NM_010811	ENSMUSG00000039308	Ndst2	Mndns|NDST-2	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2	protein-coding
common_peak2-31989-5-9--1.02630843089322-1.21398586181642	chr9	70328803	70329158	+	0	NA	intron (NM_033604, intron 2 of 14)	B1_Mur2|SINE|Alu	22552	NM_033604	93836	Mm.29783	NM_033604	ENSMUSG00000032217	Rnf111	ARK|Arkadia	ring finger 111	protein-coding
common_peak2-24017-27-51--0.708893767245856-1.25391625579201	chr16	22009488	22010165	+	0	NA	intron (NR_027488, intron 1 of 16)	CpG	269	NR_027488	75826	Mm.297431	NM_029457	ENSMUSG00000022855	Senp2	2310007L05Rik|4930538C18Rik|AI646780|AW554757|Smt3ip2|SuPr-1|mKIAA1331	SUMO/sentrin specific peptidase 2	protein-coding
unique_peak2-36962-1-5--2.2120195109379-1.32905871926422	chr3	110045092	110045484	+	0	NA	Intergenic	Intergenic	8629	NM_178891	99890	Mm.36115	NM_178891	ENSMUSG00000049300	Prmt6	AW124876|BB233495|Hrmt1l6	protein arginine N-methyltransferase 6	protein-coding
common_peak2-24477-9-8-0.0196884049619079-1.03275496310833	chr17	24632692	24633108	+	0	NA	intron (NM_027937, intron 1 of 19)	intron (NM_027937, intron 1 of 19)	7172	NM_027937	268932	Mm.70989	NM_027937	ENSMUSG00000033597	Caskin1	3300002N10Rik|C130061I24|C630036E02Rik|mKIAA1306	CASK interacting protein 1	protein-coding
common_peak1-18874-8-17--1.16470258349474-1.02063122982878	chr9	22467766	22468313	+	0	NA	intron (NM_181316, intron 16 of 21)	intron (NM_181316, intron 16 of 21)	187880	NM_178415	319845	Mm.176725	NM_178415	ENSMUSG00000035919	Bbs9	E130103I17Rik	Bardet-Biedl syndrome 9 (human)	protein-coding
unique_peak2-36101-1-15--3.62705701021674-3.91338994363176	chr2	5733975	5734470	+	0	NA	intron (NM_133837, intron 6 of 12)	intron (NM_133837, intron 6 of 12)	31784	NM_133837	98828	Mm.181490	NM_133837	ENSMUSG00000039128	Cdc123	AA959893|G431001I09Rik	cell division cycle 123	protein-coding
common_peak1-18186-422-501-0.771805737719811-20.8051415704136	chr8	19784078	19786132	+	0	NA	Intergenic	CpG	55529	NM_001039553	626415	Mm.425517	NM_001039553		4930467E23Rik	ENSMUSG00000074453|OTTMUSG00000018948|TSAP	RIKEN cDNA 4930467E23 gene	protein-coding
common_peak2-28808-19-20-0.0103699038829257-0.306326795069978	chr5	64861319	64862025	+	0	NA	Intergenic	Intergenic	-2491	NR_040681	69999	Mm.261413	NR_040681		1700027F09Rik	-	RIKEN cDNA 1700027F09 gene	ncRNA
common_peak2-24430-55-83--0.187697551626059-0.413122813965767	chr17	20945315	20946338	+	0	NA	Intergenic	Lx2B|LINE|L1	-5633	NM_134190	171224	Mm.377183	NM_134190	ENSMUSG00000061150	Vmn1r229	V1re1	vomeronasal 1 receptor 229	protein-coding
common_peak2-21927-22-38--0.638118113774844-0.887741995158868	chr12	17881701	17882904	+	0	NA	Intergenic	RLTR6_Mm|LTR|ERV1	184682	NM_016677	53602	Mm.313619	NM_016677	ENSMUSG00000071379	Hpcal1	NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3	hippocalcin-like 1	protein-coding
common_peak2-20272-20-17-0.318149783148881-0.440610794044987	chr1	190978796	190979252	+	0	NA	Intergenic	Intergenic	-147305	NM_172650	226823	Mm.209880	NM_172650	ENSMUSG00000026608	Kctd3	4930438A20Rik|9330185B06|E330032J19Rik|NY-REN-45	potassium channel tetramerisation domain containing 3	protein-coding
unique_peak1-3415-11-2-1.92373108353046-2.32232533660526	chr19	5938603	5939141	+	0	NA	Intergenic	ORR1A2|LTR|MaLR	-14056	NM_026772	104252	Mm.491103	NM_026772	ENSMUSG00000045664	Cdc42ep2	1110008C05Rik|Borg1|Cep2|D19Bwg1013e	CDC42 effector protein (Rho GTPase binding) 2	protein-coding
common_peak2-20622-12-26--1.10611151707583-1.26025077975594	chr10	80261040	80261842	+	0	NA	promoter-TSS (NM_023900)	promoter-TSS (NM_023900)	-39	NM_013651	20222	Mm.358633	NM_013651	ENSMUSG00000020211	Sf3a2	66kDa|AW047242|PRP11|SFA66|Sap62	splicing factor 3a, subunit 2	protein-coding
unique_peak2-32548-2-7--1.91745425626332-1.45399745587252	chr1	72211962	72212348	+	0	NA	intron (NM_001005423, intron 2 of 4)	URR1A|DNA|MER1_type	46726	NM_001005423	381269	Mm.422636	NM_001005423	ENSMUSG00000039395	Mreg	Gm974|Wdt2|dsu	melanoregulin	protein-coding
common_peak2-19670-7-8--0.370834171144123-1.00793137938329	chr1	55027650	55027955	+	0	NA	Intergenic	Intergenic	-44571	NM_001081433	329154	Mm.397910	NM_001081433	ENSMUSG00000052331	Ankrd44	4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B	ankyrin repeat domain 44	protein-coding
unique_peak1-6768-8-4-0.683294323060208-1.21878474469819	chr8	61357310	61357794	+	0	NA	intron (NM_175032, intron 1 of 11)	RMER6A|LTR|ERVK	32872	NM_175032	270049	Mm.236368	NM_175032		Galntl6	1700021K10Rik|4930431L04Rik|A830023L05	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6	protein-coding
unique_peak1-7158-8-3-1.00522241794757-1.39487600375387	chr9	58214015	58214521	+	0	NA	intron (NM_028854, intron 3 of 10)	intron (NM_028854, intron 3 of 10)	3908	NM_028854	74286	Mm.252761	NM_028854	ENSMUSG00000036244	Tbc1d21	1700095K08Rik|MgcRabGAP	TBC1 domain family, member 21	protein-coding
unique_peak2-32727-5-5--0.289342836727009-0.909929411522249	chr1	162130649	162130998	+	0	NA	3' UTR (NM_025474, exon 3 of 3)	3' UTR (NM_025474, exon 3 of 3)	5432	NM_025474	64659	Mm.29599	NM_025474		Mrps14	1810032L21Rik|AL022847|Rpms14	mitochondrial ribosomal protein S14	protein-coding
common_peak2-31211-20-7-1.48807478459119-2.07034318903805	chr8	65045980	65046349	+	0	NA	Intergenic	Intergenic	-383865	NM_001252620	72902	Mm.334552	NM_023689	ENSMUSG00000054162	Spock3	2900045C01Rik|AI428471|mKIAA4039	sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	protein-coding
common_peak2-31208-16-10-0.658832023630764-0.699649909729472	chr8	64523253	64523656	+	0	NA	Intergenic	L1Md_F2|LINE|L1	78536	NM_001136089	26359	Mm.42179	NM_011922	ENSMUSG00000031635	Anxa10	-	annexin A10	protein-coding
unique_peak2-32550-5-9--1.02630843089322-1.21398586181642	chr1	72463390	72463752	+	0	NA	Intergenic	Intergenic	109576	NM_009533	22596	Mm.246952	NM_009533	ENSMUSG00000026187	Xrcc5	AI314015|Ku80|Ku86	X-ray repair complementing defective repair in Chinese hamster cells 5	protein-coding
unique_peak1-7061-8-1-2.00522241794757-2.05605744720049	chr9	10260314	10260826	+	0	NA	intron (NM_001170787, intron 3 of 24)	B4|SINE|B4	366139	NR_105745	102466147		NR_105745	miRBase:MI0021584	Mir6237	mmu-mir-6237	microRNA mir-6237	ncRNA
common_peak1-7528-25-30--0.0923464050417691-0.304710633611958	chr1	33757214	33758233	+	0	NA	Intergenic	Intergenic	-19018	NM_008999	19335	Mm.86744	NM_008999	ENSMUSG00000004768	Rab23	AW545388|opb|opb2	RAB23, member RAS oncogene family	protein-coding
common_peak1-18596-21-38--0.715912953596013-0.993451450456403	chr8	106619823	106620481	+	0	NA	Intergenic	Intergenic	-5373	NM_009868	12562	Mm.21767	NM_009868	ENSMUSG00000031871	Cdh5	7B4|AA408225|Cd144|VE-Cad|VECD|VEcad|Vec	cadherin 5	protein-coding
common_peak1-14844-14-12-0.198776442216552-0.373562084705529	chr3	94718625	94719455	+	0	NA	Intergenic	MTD|LTR|MaLR	-17965	NM_009150	20341	Mm.196558	NM_009150	ENSMUSG00000068874	Selenbp1	Lp56|Lpsb|SBP56	selenium binding protein 1	protein-coding
common_peak2-20243-31-49--0.418617518961601-0.665814527695537	chr1	183344833	183346101	+	0	NA	intron (NM_028408, intron 3 of 5)	intron (NM_028408, intron 3 of 5)	62708	NM_001160211	72978	Mm.338083	NM_028408	ENSMUSG00000026514	Cnih3	2900075G08Rik|CNIH-3	cornichon homolog 3 (Drosophila)	protein-coding
common_peak1-15736-15-10-0.552733131918359-0.604422558181019	chr4	148150509	148151149	+	0	NA	Intergenic	Intergenic	-27672	NM_001159344	69743	Mm.233879	NM_027195	ENSMUSG00000028977	Casz1	2410019P08Rik|AV096627|BC040081|Cst|D4Ertd432e	castor zinc finger 1	protein-coding
common_peak1-14293-13-6-0.971117108580164-1.01572999746118	chr2	158113484	158114027	+	0	NA	Intergenic	MERVL-int|LTR|ERVL	-18474	NM_008489	16803	Mm.218846	NM_008489	ENSMUSG00000016024	Lbp	Bpifd2|Ly88	lipopolysaccharide binding protein	protein-coding
unique_peak1-872-9-2-1.60465090568306-1.87199725847353	chr11	28904849	28905308	+	0	NA	Intergenic	Intergenic	-125673	NM_027869	71701	Mm.211131	NM_027869	ENSMUSG00000020464	Pnpt1	1200003F12Rik|Old35|PNPase|Pnptl1	polyribonucleotide nucleotidyltransferase 1	protein-coding
common_peak1-12007-58-36-1.08649656926155-3.87865809592368	chr17	13920254	13922061	+	0	NA	intron (NM_010806, intron 1 of 32)	intron (NM_010806, intron 1 of 32)	-22756	NM_022311	21646	Mm.486358	NM_022311		Tcte2	AI429268|Tcte-2	t-complex-associated testis expressed 2	protein-coding
common_peak2-28928-52-90--0.399534649932997-0.905069649695056	chr5	93205493	93206971	+	0	NA	intron (NM_015756, intron 1 of 10)	ID4|SINE|ID	11356	NR_035487	100316841		NR_035487	miRBase:MI0009958	Mir1961	mmu-mir-1961	microRNA 1961	ncRNA
common_peak2-29333-37-65--0.518401047872635-1.01073730818493	chr5	147859878	147861369	+	0	NA	intron (NM_080795, intron 1 of 9)	intron (NM_080795, intron 1 of 9)	27525	NM_080795	140887	Mm.272203	NM_080795	ENSMUSG00000016520	Lnx2	9630046H24|AW209022	ligand of numb-protein X 2	protein-coding
common_peak2-31522-4-13--1.83081543591085-2.04196296489515	chr8	109704640	109705321	+	0	NA	intron (NM_025558, intron 4 of 4)	L1MD1|LINE|L1	30419	NM_025558	66427	Mm.20242	NM_025558	ENSMUSG00000031924	Cyb5b	1810044O22Rik|AU015618|Cyb5m	cytochrome b5 type B	protein-coding
common_peak2-24409-11-15--0.491306415748387-0.435191258261915	chr17	15376076	15376786	+	0	NA	intron (NR_046164, intron 2 of 4)	intron (NR_046164, intron 2 of 4)	1316	NR_046164	328747	Mm.256835	NR_046164	ENSMUSG00000097624	Gm5091	C330048F19	predicted gene 5091	ncRNA
common_peak2-27093-36-52--0.248599368395444-0.410818340144431	chr3	121290694	121292268	+	0	NA	Intergenic	Intergenic	54922	NR_036456	100503044	Mm.65320	NM_176992	ENSMUSG00000044522	A730020M07Rik	-	RIKEN cDNA A730020M07 gene	ncRNA
common_peak1-19238-18-36--0.896534214400599-1.30767018140165	chr9	108490743	108491511	+	0	NA	intron (NM_028944, intron 2 of 8)	B4A|SINE|B4	8804	NM_028944	74443	Mm.226534	NM_028944	ENSMUSG00000006675	P4htm	4933406E20Rik|AI853847|BB128974|Ph-4	prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)	protein-coding
common_peak1-15823-33-26-0.576450060362061-0.950816664083185	chr5	108461066	108462115	+	0	NA	Intergenic	(CAA)n|Simple_repeat|Simple_repeat	-33103	NM_001253880	17765	Mm.257149	NM_013827	ENSMUSG00000029267	Mtf2	9230112N11Rik|AA537621|C76717|M96|Pcl2	metal response element binding transcription factor 2	protein-coding
unique_peak2-37611-2-6--1.72480917832092-1.26211192963361	chr5	64360889	64361210	+	0	NA	promoter-TSS (NM_145923)	promoter-TSS (NM_145923)	-913	NM_145923	100532	Mm.243632	NM_145923	ENSMUSG00000047881	Rell1	AA536743	RELT-like 1	protein-coding
unique_peak2-35798-5-9--1.02630843089322-1.21398586181642	chr18	59175425	59175875	+	0	NA	intron (NM_175506, intron 18 of 22)	ORR1D2|LTR|MaLR	-46385	NR_033764	225583	Mm.209711	NM_173759	ENSMUSG00000050875	A730017C20Rik	-	RIKEN cDNA A730017C20 gene	protein-coding
common_peak2-23865-35-40-0.0738182538444203-0.324581211600972	chr15	102470378	102471263	+	0	NA	Intergenic	Intergenic	-14968	NM_146065	223922	Mm.208714	NM_146065	ENSMUSG00000099083	Atf7	1110012F10Rik|9430065F09Rik|AI549878|C130020M04Rik	activating transcription factor 7	protein-coding
common_peak2-27413-15-13-0.204809828498052-0.368541233333383	chr3	88512756	88513230	+	0	NA	intron (NM_028814, intron 11 of 13)	intron (NM_028814, intron 11 of 13)	-7783	NM_009069	19769	Mm.4009	NM_009069		Rit1	RIBB|ROC1|Rit	Ras-like without CAAX 1	protein-coding
unique_peak1-2313-14-4-1.57728806547028-2.4322161449009	chr15	81891424	81892263	+	0	NA	intron (NM_001166475, intron 1 of 1)	intron (NM_001166475, intron 1 of 1)	2262	NM_001166475	328573	Mm.399189	NM_001166475	ENSMUSG00000075524	4930407I10Rik	Gm747	RIKEN cDNA 4930407I10 gene	protein-coding
common_peak1-13031-40-53--0.09591181941237-0.309382327481447	chr19	5490312	5491629	+	0	NA	intron (NM_007687, intron 1 of 3)	CpG	515	NM_007687	12631	Mm.329655	NM_007687		Cfl1	AA959946|Cof|n-cofilin	cofilin 1, non-muscle	protein-coding
unique_peak2-36036-17-17-0.0483713367627256-0.325169893479371	chr19	43879310	43880248	+	0	NA	intron (NM_013806, intron 9 of 31)	intron (NM_013806, intron 9 of 31)	22981	NM_013806	12780	Mm.39054	NM_013806	ENSMUSG00000025194	Abcc2	AI173996|Abc30|Cmoat|Mrp2|cMRP	ATP-binding cassette, sub-family C (CFTR/MRP), member 2	protein-coding
common_peak2-31434-39-37-0.367833733475568-0.665814527695537	chr8	95488234	95489129	+	0	NA	intron (NM_009209, intron 1 of 13)	intron (NM_009209, intron 1 of 13)	3735	NM_009209	20538	Mm.57040	NM_009209	ENSMUSG00000055368	Slc6a2	NE-T|NET|Slc6a5	solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2	protein-coding
unique_peak2-39461-7-10--0.660340788339108-1.12966497611638	chr9	53609856	53610288	+	0	NA	Intergenic	B3|SINE|B2	-9270	NM_028060	72022	Mm.26159	NM_028060	ENSMUSG00000042195	Slc35f2	1500009K05Rik|AU019213	solute carrier family 35, member F2	protein-coding
common_peak1-16849-10-8-0.186490343566457-1.078512453669	chr6	54130692	54131250	+	0	NA	intron (NM_001163640, intron 2 of 12)	intron (NM_001163640, intron 2 of 12)	-91845	NM_023543	69993	Mm.321147	NM_023543	ENSMUSG00000004633	Chn2	1700026N20Rik|4930557O16Rik|ARHGAP3|Bch	chimerin 2	protein-coding
common_peak2-27478-26-50--0.744526249813033-1.39836854781781	chr3	92280152	92281268	+	0	NA	Intergenic	(TAAA)n|Simple_repeat|Simple_repeat	9093	NM_009264	20753	Mm.331191	NM_009264	ENSMUSG00000050359	Sprr1a	AI528815|SPR1a|mSPRR1A	small proline-rich protein 1A	protein-coding
common_peak2-24528-5-9--1.02630843089322-1.21398586181642	chr17	26953600	26954119	+	0	NA	Intergenic	Intergenic	24651	NM_008700	18091	Mm.41974	NM_008700	ENSMUSG00000015579	Nkx2-5	Csx|Nkx-2.5|Nkx2.5|tinman	NK2 homeobox 5	protein-coding
unique_peak1-855-8-0-3.00522241794757-2.70926996097583	chr11	20445121	20445643	+	0	NA	intron (NM_021372, intron 1 of 1)	B4A|SINE|B4	2126	NM_021372	58172	Mm.339676	NM_021372	ENSMUSG00000049800	Sertad2	AB041541|AU021878|Kiaa0127|SEI-2|Sei2|TRIP-Br2|mKIAA0127	SERTA domain containing 2	protein-coding
common_peak1-18837-14-19--0.422711934529718-0.403453972741636	chr9	15044948	15045707	+	0	NA	intron (NM_026955, intron 1 of 3)	intron (NM_026955, intron 1 of 3)	1838	NM_026955	69137	Mm.41396	NM_026955	ENSMUSG00000031937	Vstm5	2200002K05Rik	V-set and transmembrane domain containing 5	protein-coding
common_peak2-24511-36-15-1.47932108616775-3.70968671820992	chr17	26584731	26585447	+	0	NA	Intergenic	Intergenic	33179	NM_001081656	240055	Mm.133211	NM_001081656	ENSMUSG00000034413	Neurl1b	C230078M08Rik|EG240055	neuralized homolog 1b (Drosophila)	protein-coding
unique_peak1-135-15-3-2.01216475055566-3.03427613622886	chr1	65118144	65118959	+	0	NA	intron (NM_001082573, intron 2 of 2)	intron (NM_001082573, intron 2 of 2)	1555	NM_007775	12966	Mm.491115	NM_007775	ENSMUSG00000025952	Crygc	Cryg-5	crystallin, gamma C	protein-coding
common_peak1-8491-8-23--1.57974008277359-1.94520747672513	chr10	80826585	80827043	+	0	NA	TTS (NM_001014836)	TTS (NM_001014836)	1751	NM_001014836	432479	Mm.440450	NM_001014836	ENSMUSG00000020234	4930404N11Rik	2210409H10Rik|5730551K18Rik|AI854616	RIKEN cDNA 4930404N11 gene	protein-coding
common_peak1-14810-17-35--0.951628663237274-1.34608670144205	chr3	90293036	90293984	+	0	NA	exon (NM_133854, exon 4 of 4)	exon (NM_133854, exon 4 of 4)	1425	NM_133854	20615	Mm.331182	NM_133854	ENSMUSG00000001018	Snapin	25kDa|AA407989|AV026596|Bloc1s7|Snap25bp|Snapap	SNAP-associated protein	protein-coding
common_peak1-10718-94-185--0.409569243258715-1.65838101783461	chr14	61680958	61683667	+	0	NA	Intergenic	Intergenic	-16620	NM_013869	29820	Mm.281356	NM_013869	ENSMUSG00000060548	Tnfrsf19	AL023044|AW123854|TAJ|TAJ-ALPHA|TRADE|Troy	tumor necrosis factor receptor superfamily, member 19	protein-coding
unique_peak2-38555-1-7--2.62705701021674-1.80617997398389	chr7	63924678	63925029	+	0	NA	Intergenic	Intergenic	429712	NM_021879	18431	Mm.137052	NM_021879	ENSMUSG00000030450	Oca2	D7H15S12|D7Icr28RN|D7Nic1|p	oculocutaneous albinism II	protein-coding
common_peak1-9577-127-144-0.471477421313122-2.35539710269203	chr11	118359949	118363794	+	0	NA	intron (NM_001285438, intron 8 of 13)	intron (NM_001285438, intron 8 of 13)	23597	NM_172573	217364	Mm.473963	NM_172573	ENSMUSG00000033857	Engase	C130099A03|D230014K01Rik	endo-beta-N-acetylglucosaminidase	protein-coding
unique_peak1-7232-9-0-3.18961340640422-3.01029995663981	chr9	75571198	75571644	+	0	NA	Intergenic	L1Md_T|LINE|L1	-39558	NM_009130	20255	Mm.2386	NM_009130	ENSMUSG00000032181	Scg3	1B1075|AI385542|Chgd|SgIII	secretogranin III	protein-coding
common_peak1-19154-9-18--1.05831410703937-0.965105923112245	chr9	92251155	92251644	+	0	NA	intron (NM_001033184, intron 6 of 6)	intron (NM_001033184, intron 6 of 6)	47184	NM_001033184	78459	Mm.179195	NM_001033184	ENSMUSG00000074139	1700057G04Rik	-	RIKEN cDNA 1700057G04 gene	protein-coding
common_peak2-24026-107-101-0.681621590701901-3.58467208523429	chr16	23106887	23108787	+	0	NA	non-coding (NR_110335, exon 1 of 12)	non-coding (NR_110335, exon 1 of 12)	296	NR_110335	13682	Mm.260084	NM_013506	ENSMUSG00000022884	Eif4a2	4833432N07Rik|BM-010|Ddx2b|Eif4|eIF-4A-II|eIF4A-II	eukaryotic translation initiation factor 4A2	protein-coding
common_peak2-22086-11-19--0.813234510635749-0.769930178837768	chr12	79006738	79007339	+	0	NA	Intergenic	Intergenic	-320604	NM_172952	268566	Mm.341742	NM_145965	ENSMUSG00000047454	Gphn	5730552E08Rik|AI662856|BC027112|C230040D23|GPH|GPHRYN|geph	gephyrin	protein-coding
common_peak1-15102-35-40-0.0738182538444203-0.324581211600972	chr3	132964879	132966105	+	0	NA	Intergenic	RLTR20A1|LTR|ERVK	-7582	NM_001293641	74776	Mm.210305	NM_146141	ENSMUSG00000028013	Ppa2	1110013G13Rik|Sid6306	pyrophosphatase (inorganic) 2	protein-coding
common_peak2-27770-71-109--0.136915534804689-0.385213567753735	chr3	132683594	132684728	+	0	NA	intron (NM_026231, intron 5 of 11)	L1Md_F3|LINE|L1	70543	NM_026231	67553	Mm.304899	NM_026231	ENSMUSG00000028018	Gstcd	4933434L15Rik	glutathione S-transferase, C-terminal domain containing	protein-coding
common_peak2-30671-32-35-0.109167017777348-0.348003640999429	chr7	102209514	102210308	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-1149236	NM_011858	23966	Mm.254610	NM_011858	ENSMUSG00000048078	Tenm4	Doc4|ELM2|Odz4|R75022|Ten-m4|l(7)-3Rn|l7Rn3|mKIAA1302	teneurin transmembrane protein 4	protein-coding
common_peak1-18789-36-34-0.350038069222788-0.634705740500755	chr9	14613926	14615161	+	0	NA	intron (NM_018736, intron 10 of 19)	intron (NM_018736, intron 10 of 19)	25392	NM_018736	17535	Mm.149071	NM_018736	ENSMUSG00000031928	Mre11a	Mre11|Mre11b	meiotic recombination 11 homolog A (S. cerevisiae)	protein-coding
common_peak2-20195-22-17-0.477359103645092-0.633951497070961	chr1	173941973	173942863	+	0	NA	intron (NM_033509, intron 3 of 7)	intron (NM_033509, intron 3 of 7)	14981	NM_033509	93840	Mm.36148	NM_033509	ENSMUSG00000026556	Vangl2	C530001F03Rik|Lp|Lpp1|Ltap|Vang1l2|loop-tail|ska17|ska<m17Jus>|stbm|strabismus	vang-like 2 (van gogh, Drosophila)	protein-coding
common_peak1-11302-17-8-1.04837133676273-1.30305656033811	chr15	83565635	83566541	+	0	NA	Intergenic	Intergenic	-10619	NM_022723	64706	Mm.40393	NM_022723	ENSMUSG00000016763	Scube1	7330410C13Rik|A630023E24Rik	signal peptide, CUB domain, EGF-like 1	protein-coding
unique_peak2-39044-2-5--1.50241675698448-1.08602067057793	chr8	70348746	70349105	+	0	NA	intron (NM_177698, intron 8 of 14)	intron (NM_177698, intron 8 of 14)	-6731	NM_027626	234353	Mm.32525	NM_027626	ENSMUSG00000030465	Psd3	4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D	pleckstrin and Sec7 domain containing 3	protein-coding
common_peak2-29670-57-54-0.484673326554269-1.18246856546184	chr6	72292309	72293647	+	0	NA	intron (NM_138592, intron 1 of 12)	intron (NM_138592, intron 1 of 12)	2191	NM_138592	28035	Mm.281900	NM_138592	ENSMUSG00000056305	Usp39	AA408960|AI894154|CGI-21|D6Wsu157e|SAD1	ubiquitin specific peptidase 39	protein-coding
unique_peak1-1352-9-1-2.18961340640422-2.31132995230379	chr12	17746711	17747233	+	0	NA	intron (NM_016677, intron 1 of 3)	intron (NM_016677, intron 1 of 3)	49352	NM_016677	53602	Mm.313619	NM_016677	ENSMUSG00000071379	Hpcal1	NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3	hippocalcin-like 1	protein-coding
unique_peak2-33219-3-6--1.22133801201688-1.08602067057793	chr10	118804326	118804654	+	0	NA	Intergenic	MIR|SINE|MIR	-46010	NR_040578	67081	Mm.72644	NR_040578		1700025F24Rik	-	RIKEN cDNA 1700025F24 gene	ncRNA
unique_peak1-2797-7-0-2.79909083029819-2.40823996531185	chr17	13923811	13924195	+	0	NA	intron (NM_010806, intron 1 of 32)	intron (NM_010806, intron 1 of 32)	-25602	NM_022311	21646	Mm.486358	NM_022311		Tcte2	AI429268|Tcte-2	t-complex-associated testis expressed 2	protein-coding
common_peak2-22949-18-32--0.731474968130102-0.907815120698057	chr14	49172084	49172848	+	0	NA	Intergenic	MIRc|SINE|MIR	106439	NM_172600	218989	Mm.85211	NM_172600	ENSMUSG00000036339	Tmem260	5930435P15|6720456H20Rik	transmembrane protein 260	protein-coding
common_peak2-31665-9-11--0.395349094316936-0.344532117358383	chr8	126735867	126736498	+	0	NA	Intergenic	Intergenic	-19112	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
common_peak1-12995-45-40-0.502806020726788-1.02303743263849	chr19	4305486	4306803	+	0	NA	promoter-TSS (NM_130863)	promoter-TSS (NM_130863)	78	NM_130863	110355	Mm.254144	NM_130863	ENSMUSG00000024858	Adrbk1	Adrbk-1|Bark-1|GRK2|beta ARK|betaARK1	adrenergic receptor kinase, beta 1	protein-coding
common_peak1-13878-41-26-0.946261202685192-2.21947156384787	chr2	72475664	72477225	+	0	NA	Intergenic	Intergenic	-65123	NR_040503	74541	Mm.410774	NR_040503	ENSMUSG00000085252	8430437L04Rik	-	RIKEN cDNA 8430437L04 gene	ncRNA
common_peak2-22835-30-30-0.215479099104998-0.419637632935632	chr14	20702424	20703620	+	0	NA	intron (NM_001285908, intron 3 of 3)	B4|SINE|B4	44875	NR_105025	52512	Mm.483998	NR_105025		D14Ertd670e	-	DNA segment, Chr 14, ERATO Doi 670, expressed	ncRNA
common_peak1-11022-68-119--0.336929816310223-0.886732479180814	chr15	38469898	38471496	+	0	NA	Intergenic	Intergenic	-21676	NM_018745	54375	Mm.250214	NM_018745	ENSMUSG00000037458	Azin1	1700085L02Rik|AI414949|Oazi|Oazin	antizyme inhibitor 1	protein-coding
common_peak1-17305-38-10-2.11202104066123-6.18152551155272	chr6	137701859	137703100	+	0	NA	promoter-TSS (NM_172733)	promoter-TSS (NM_172733)	-619	NM_172733	232449	Mm.29181	NM_172733	ENSMUSG00000030225	Dera	2010002D22Rik|2500002K03Rik|DEOC	2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	protein-coding
unique_peak2-37547-9-12--0.510826311736872-0.394412252720706	chr5	31220740	31221481	+	0	NA	exon (NM_133918, exon 4 of 8)	exon (NM_133918, exon 4 of 8)	-3158	NM_008439	16548	Mm.22451	NM_008439	ENSMUSG00000029162	Khk	-	ketohexokinase	protein-coding
common_peak1-18591-10-9-0.0344872501214071-1.05503135781948	chr8	106576626	106577265	+	0	NA	Intergenic	Intergenic	-48580	NM_009868	12562	Mm.21767	NM_009868	ENSMUSG00000031871	Cdh5	7B4|AA408225|Cd144|VE-Cad|VECD|VEcad|Vec	cadherin 5	protein-coding
unique_peak1-2481-6-4-0.24347001549294-0.989110657569874	chr16	4683261	4683773	+	0	NA	promoter-TSS (NM_023646)	promoter-TSS (NM_023646)	-553	NM_023646	83945	Mm.248337	NM_023646	ENSMUSG00000004069	Dnaja3	1200003J13Rik|1810053A11Rik|C81173|Tid-1|Tid1l	DnaJ (Hsp40) homolog, subfamily A, member 3	protein-coding
common_peak2-20036-4-5--0.608423014574403-0.909929411522249	chr1	138617636	138618069	+	0	NA	intron (NR_037986, intron 2 of 4)	(CCAA)n|Simple_repeat|Simple_repeat	25064	NR_037986	100503474	Mm.428276	NR_037986		Gm16880	-	predicted gene, 16880	ncRNA
common_peak2-30008-26-15-0.927899092158462-1.40782320807777	chr6	124904309	124905012	+	0	NA	Intergenic	RLTR11B|LTR|ERVK	10755	NM_012003	26894	Mm.244536	NM_012003	ENSMUSG00000030127	Cops7a	D6Ertd35e	COP9 (constitutive photomorphogenic) homolog, subunit 7a (Arabidopsis thaliana)	protein-coding
unique_peak2-35921-5-6--0.511735258063458-0.947717972411649	chr19	5943225	5943581	+	0	NA	intron (NM_001164057, intron 14 of 17)	intron (NM_001164057, intron 14 of 17)	-18587	NM_026772	104252	Mm.491103	NM_026772	ENSMUSG00000045664	Cdc42ep2	1110008C05Rik|Borg1|Cep2|D19Bwg1013e	CDC42 effector protein (Rho GTPase binding) 2	protein-coding
unique_peak1-4084-12-2-2.06381348436648-2.79529063155376	chr2	71539958	71540453	+	0	NA	Intergenic	Intergenic	-17269	NR_037979	381371	Mm.330284	NM_201366	ENSMUSG00000064263	Gm1631	-	predicted gene 1631	ncRNA
unique_peak2-32646-6-9--0.75652998450706-1.11707584880836	chr1	131827273	131827818	+	0	NA	intron (NM_172485, intron 14 of 27)	intron (NM_172485, intron 14 of 27)	492031	NM_007827	13137	Mm.436759	NM_007827	ENSMUSG00000026401	Daf2	AI323748|Cd55b|Daf|Daf-TM|TM-DAF	decay accelerating factor 2	protein-coding
unique_peak2-33083-3-10--1.87341470859657-1.75805390616669	chr10	80100619	80101083	+	0	NA	exon (NM_134002, exon 4 of 11)	exon (NM_134002, exon 4 of 11)	8450	NM_001159591	103236	Mm.29873	NM_134002	ENSMUSG00000003345	Csnk1g2	2810429I12Rik|AI463719	casein kinase 1, gamma 2	protein-coding
unique_peak2-33615-7-5-0.214128329577033-1.01466476204226	chr11	95093457	95093750	+	0	NA	Intergenic	Intergenic	-29240	NM_053093	93670	Mm.40085	NM_053093	ENSMUSG00000020872	Tac4	AW489379|PPT-C	tachykinin 4	protein-coding
common_peak2-24526-12-16--0.4386868561627-0.368541233333383	chr17	26939753	26940276	+	0	NA	Intergenic	ID_B1|SINE|B4	21990	NM_172149	224630	Mm.21795	NM_172149	ENSMUSG00000024191	Bnip1	2010005M06Rik|5930429G21Rik|Sec20	BCL2/adenovirus E1B interacting protein 1	protein-coding
unique_peak1-3715-10-2-1.77145284428761-2.09384600808989	chr19	45055115	45055636	+	0	NA	3' UTR (NM_001081225, exon 20 of 20)	3' UTR (NM_001081225, exon 20 of 20)	3665	NR_040294	73894	Mm.491408	NR_040294		4930414N06Rik	-	RIKEN cDNA 4930414N06 gene	ncRNA
common_peak1-13345-37-17-1.35606807004351-3.31195702770221	chr19	44281835	44283516	+	0	NA	intron (NM_024450, intron 1 of 5)	intron (NM_024450, intron 1 of 5)	4897	NM_024450	30049	Mm.480594	NM_024450	ENSMUSG00000025202	Scd3	4930513N16Rik	stearoyl-coenzyme A desaturase 3	protein-coding
common_peak1-10715-6-1-1.5653981103803-1.56314192529759	chr14	61556009	61556439	+	0	NA	Intergenic	Intergenic	100600	NM_001164155	29820	Mm.281356	NM_013869	ENSMUSG00000060548	Tnfrsf19	AL023044|AW123854|TAJ|TAJ-ALPHA|TRADE|Troy	tumor necrosis factor receptor superfamily, member 19	protein-coding
unique_peak2-36728-3-5--0.998945590680433-0.96108193396963	chr3	57092646	57093023	+	0	NA	intron (NM_008536, intron 6 of 6)	intron (NM_008536, intron 6 of 6)	13007	NM_008536	17112	Mm.856	NM_008536	ENSMUSG00000027800	Tm4sf1	L6|M3s1	transmembrane 4 superfamily member 1	protein-coding
unique_peak2-34667-4-9--1.34538860874061-1.36011389749466	chr15	102350830	102351355	+	0	NA	intron (NM_009319, intron 3 of 8)	intron (NM_009319, intron 3 of 8)	2469	NM_009319	21357	Mm.291485	NM_009319	ENSMUSG00000023051	Tarbp2	Prbp|TRBP	TAR (HIV) RNA binding protein 2	protein-coding
unique_peak1-4185-8-8--0.164702583494742-1.00793137938329	chr2	116942300	116942810	+	0	NA	Intergenic	Intergenic	-4252	NM_001277256	114715	Mm.245890	NM_033524	ENSMUSG00000027351	Spred1	5730461F13Rik|AL024345|AW047647	sprouty protein with EVH-1 domain 1, related sequence	protein-coding
common_peak1-8186-13-8-0.608547029195456-0.660903317613904	chr10	80265012	80265593	+	0	NA	intron (NM_013651, intron 4 of 8)	intron (NM_013651, intron 4 of 8)	-2691	NM_007445	11705	Mm.376094	NM_007445	ENSMUSG00000035262	Amh	MIS	anti-Mullerian hormone	protein-coding
common_peak2-23771-23-22-0.198205548452068-0.373496418836697	chr15	98691477	98692372	+	0	NA	intron (NM_001033276, intron 12 of 54)	intron (NM_001033276, intron 12 of 54)	9712	NM_001033276	381022	Mm.264889	NM_001033276	ENSMUSG00000048154	Kmt2d	ALR|BC032281|BC058659|C430014K11Rik|KMT2B|Mll2|Mll4	lysine (K)-specific methyltransferase 2D	protein-coding
common_peak1-16711-9-7-0.18961340640422-1.05908390183068	chr6	28790827	28791319	+	0	NA	intron (NM_019776, intron 16 of 23)	intron (NM_019776, intron 16 of 23)	-9326	NM_138682	192198	Mm.443660	NM_138682	ENSMUSG00000049939	Lrrc4	MBAG1|NGL-2|NLG-2|Nag14	leucine rich repeat containing 4	protein-coding
common_peak2-27526-6-18--1.68252940306328-1.66449268468235	chr3	95725563	95726289	+	0	NA	Intergenic	MTC|LTR|MaLR	-7254	NM_001253758	66471	Mm.218657	NM_023210	ENSMUSG00000015749	Anp32e	2810018A15Rik|AI047746|AI326868|CPD1|LANP-L|LANPL|mLANP-L	acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	protein-coding
unique_peak1-1172-14-6-1.09186123830004-1.16633110333236	chr11	100055879	100056394	+	0	NA	Intergenic	Intergenic	-1576	NM_201255	107656	Mm.445335	NM_201255	ENSMUSG00000051617	Krt9	EPPK|K9|Krt1-9	keratin 9	protein-coding
common_peak1-14901-20-17-0.318149783148881-0.440610794044987	chr3	96556993	96557871	+	0	NA	intron (NM_026406, intron 1 of 8)	intron (NM_026406, intron 1 of 8)	25898	NM_026406	67845	Mm.386792	NM_026406	ENSMUSG00000028098	Rnf115	2610028E05Rik|AU042696|Zfp364	ring finger protein 115	protein-coding
common_peak1-14025-27-33--0.0959168903551033-0.304370854244436	chr2	113848272	113849256	+	0	NA	intron (NR_028423, intron 3 of 4)	intron (NR_028423, intron 3 of 4)	-9409	NM_010290	14617	Mm.389394	NM_010290	ENSMUSG00000068615	Gjd2	Gja9|connexin36|cx36	gap junction protein, delta 2	protein-coding
common_peak2-21254-60-55-0.546936939562928-1.46410551884986	chr11	69394759	69396186	+	0	NA	intron (NM_001127233, intron 1 of 10)	intron (NM_001127233, intron 1 of 10)	1611	NM_001127233	22059	Mm.222	NM_011640	ENSMUSG00000059552	Trp53	Tp53|bbl|bfy|bhy|p44|p53	transformation related protein 53	protein-coding
common_peak1-14460-60-149--0.874526828875349-4.58208152785191	chr3	51559835	51561615	+	0	NA	intron (NM_001004176, intron 2 of 4)	(GGA)n|Simple_repeat|Simple_repeat	95610	NM_174995	211666	Mm.24679	NM_174995	ENSMUSG00000074604	Mgst2	GST2|MGST-II	microsomal glutathione S-transferase 2	protein-coding
common_peak2-21125-11-5-0.923731083530457-1.477227296591	chr11	53904629	53904992	+	0	NA	Intergenic	Intergenic	-9616	NM_001136076	18452	Mm.3705	NM_011031	ENSMUSG00000018906	P4ha2	AA407196|C76437|P4hl	procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide	protein-coding
unique_peak1-6307-9-6-0.382258484346616-1.11707584880836	chr7	38217262	38217792	+	0	NA	Intergenic	Intergenic	337244	NM_172385	243937	Mm.322505	NM_172385	ENSMUSG00000043456	Zfp536	9630010P11Rik|Znf536|mKIAA0390	zinc finger protein 536	protein-coding
unique_peak1-7393-10-3-1.35641534500877-1.75805390616669	chrX	103532520	103533079	+	0	NA	Intergenic	T-rich|Low_complexity|Low_complexity	27634	NR_105803	102465963		NR_105803	miRBase:MI0021913	Mir6382	mmu-mir-6382	microRNA mir-6382	ncRNA
common_peak1-11151-30-29-0.262784813883354-0.465043498729215	chr15	74714269	74715428	+	0	NA	Intergenic	PB1D7|SINE|Alu	-2714	NM_025929	67038	Mm.154566	NM_025929	ENSMUSG00000063522	2010109I03Rik	-	RIKEN cDNA 2010109I03 gene	protein-coding
common_peak2-23230-12-8-0.478850983645327-0.562038191119709	chr15	6642554	6643074	+	0	NA	Intergenic	L1ME1|LINE|L1	-15567	NM_030168	78757	Mm.275811	NM_030168	ENSMUSG00000050310	Rictor	4921505C17Rik|6030405M08Rik|AVO3|AW492497|D530039E11Rik	RPTOR independent companion of MTOR, complex 2	protein-coding
common_peak2-26890-21-23--0.0154732354549205-0.305650498375555	chr2	157447689	157448575	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-56035	NM_016916	53619	Mm.480461	NM_016916	ENSMUSG00000067787	Blcap	AI462828|Bc10	bladder cancer associated protein homolog (human)	protein-coding
common_peak1-12117-10-13--0.450939577048835-0.386243247519795	chr17	26605908	26606545	+	0	NA	Intergenic	Intergenic	39191	NM_013642	19252	Mm.239041	NM_013642	ENSMUSG00000024190	Dusp1	3CH134|MKP1|Ptpn16|U19515|erp|mkp-1	dual specificity phosphatase 1	protein-coding
unique_peak2-32739-3-10--1.87341470859657-1.75805390616669	chr1	165236498	165236941	+	0	NA	intron (NM_001025570, intron 1 of 2)	intron (NM_001025570, intron 1 of 2)	7062	NM_011127	18933	Mm.288642	NM_011127	ENSMUSG00000026586	Prrx1	A230024N07Rik|AA755424|AI385634|AI843499|K-2|Pmx|Pmx1|Prx1|mHox	paired related homeobox 1	protein-coding
unique_peak2-37406-5-10--1.16381195464315-1.33892459842472	chr4	141793588	141794153	+	0	NA	intron (NM_001109685, intron 1 of 7)	intron (NM_001109685, intron 1 of 7)	1446	NM_001109685	71529	Mm.255986	NM_144531	ENSMUSG00000040606	Kazn	2310007B04Rik|9030409G11Rik|AI256607|AI666764|AW061099|Kaz|Kazrin	kazrin, periplakin interacting protein	protein-coding
common_peak1-9729-68-94-0.0001051709673483-0.302178928225441	chr12	35046433	35048260	+	0	NA	intron (NM_001271386, intron 14 of 27)	intron (NM_001271386, intron 14 of 27)	166408	NM_024124	79221	Mm.310551	NM_024124	ENSMUSG00000004698	Hdac9	AV022454|D030072B18Rik|HD7B|HD9|HDRP|Hdac7b|Mitr|mKIAA0744	histone deacetylase 9	protein-coding
common_peak2-31864-86-139--0.153647222912613-0.439568173497068	chr9	52047757	52049292	+	0	NA	Intergenic	B4|SINE|B4	-72308	NM_001162921	244871	Mm.295686	NM_001162921	ENSMUSG00000035164	Zc3h12c	A230108E06|C230027N18Rik|mKIAA1726	zinc finger CCCH type containing 12C	protein-coding
common_peak1-16650-46-23-1.31303344252765-4.01185321998351	chr6	91388577	91390220	+	0	NA	intron (NR_045980, intron 1 of 2)	ID4_|SINE|ID	1450	NR_045980	75787	Mm.30842	NR_045980	ENSMUSG00000097693	4930471M09Rik	4930427C17Rik	RIKEN cDNA 4930471M09 gene	ncRNA
common_peak1-13687-21-37--0.67843824817735-0.907273387067392	chr2	29944788	29945769	+	0	NA	intron (NM_153805, intron 18 of 21)	B1_Mus2|SINE|Alu	3877	NM_025428	66220	Mm.22538	NM_025428	ENSMUSG00000015335	Zdhhc12	1190004A01Rik	zinc finger, DHHC domain containing 12	protein-coding
common_peak1-18327-16-6-1.31090872021046-1.49151883326344	chr8	60954272	60955005	+	0	NA	intron (NM_175032, intron 2 of 11)	intron (NM_175032, intron 2 of 11)	224955	NM_001177534	100271928	Mm.484123	NM_001177534		Gm15881	OTTMUSG00000027193	predicted gene 15881	protein-coding
common_peak2-24495-190-236-0.463107114524798-3.5090390740362	chr17	25272558	25274526	+	0	NA	intron (NM_011930, intron 1 of 24)	intron (NM_011930, intron 1 of 24)	3203	NM_011930	26373	Mm.270587	NM_011930	ENSMUSG00000036636	Clcn7	AA409691|AW538136|ClC-7|D17Wsu51e	chloride channel 7	protein-coding
unique_peak1-2248-9-1-2.18961340640422-2.31132995230379	chr15	77293195	77293665	+	0	NA	Intergenic	RLTR9A|LTR|ERVK	-14047	NM_177744	245282	Mm.390820	NM_177744	ENSMUSG00000050982	Apol10a	9030421J09Rik	apolipoprotein L 10A	protein-coding
common_peak2-24113-15-13-0.204809828498052-0.368541233333383	chr16	32877879	32878579	+	0	NA	intron (NM_027226, intron 1 of 8)	CpG	359	NM_001159349	69823	Mm.12831	NM_027226	ENSMUSG00000022800	Fyttd1	2010005M05Rik|3830411L18Rik|3830421F13Rik|4933423A17Rik|AI098218|AW539567|C85190	forty-two-three domain containing 1	protein-coding
common_peak1-10469-15-35--1.15776025088666-1.87578206828671	chr13	111490196	111490953	+	0	NA	Intergenic	L1_Rod|LINE|L1	305322	NM_152804	20620	Mm.380	NM_152804	ENSMUSG00000021701	Plk2	Snk	polo-like kinase 2	protein-coding
common_peak1-15123-62-126--0.577933227970081-2.04205838347864	chr3	138143088	138144817	+	0	NA	intron (NM_175224, intron 2 of 10)	intron (NM_175224, intron 2 of 10)	8394	NM_175224	75624	Mm.26833	NM_175224	ENSMUSG00000005813	Metap1	1700029C17Rik|AW047992|mKIAA0094	methionyl aminopeptidase 1	protein-coding
common_peak2-26471-27-11-1.40658345017408-2.62629506227042	chr2	77268768	77269390	+	0	NA	intron (NM_178723, intron 6 of 9)	Lx7|LINE|L1	-31622	NR_040368	100503106	Mm.443215	NR_040368	ENSMUSG00000085845	Gm13944	OTTMUSG00000015155	predicted gene 13944	ncRNA
common_peak1-8753-9-10--0.269818212233077-1.05503135781948	chr11	4637209	4637705	+	0	NA	exon (NM_026015, exon 6 of 6)	exon (NM_026015, exon 6 of 6)	9324	NM_138948	192650	Mm.207056	NM_138948		Cabp7	-	calcium binding protein 7	protein-coding
unique_peak2-34196-1-6--2.43441193227435-1.56314192529759	chr13	38309702	38310078	+	0	NA	intron (NM_026382, intron 6 of 8)	B3|SINE|B2	13082	NM_026382	67797	Mm.250783	NM_026382	ENSMUSG00000021431	Snrnp48	1110050F08Rik|6530403A03Rik|C6orf151	small nuclear ribonucleoprotein 48 (U11/U12)	protein-coding
common_peak1-18214-10-17--0.813509656433543-0.699649909729472	chr8	24975473	24976017	+	0	NA	intron (NM_001277239, intron 4 of 7)	intron (NM_001277239, intron 4 of 7)	195612	NM_177086	320158	Mm.121274	NM_177086	ENSMUSG00000037492	Zmat4	9630048M01Rik	zinc finger, matrin type 4	protein-coding
common_peak1-19018-15-6-1.20480982849805-1.32521814697968	chr9	63030804	63031444	+	0	NA	intron (NM_011840, intron 21 of 21)	intron (NM_011840, intron 21 of 21)	-34356	NM_001163758	207667	Mm.36349	NM_172446	ENSMUSG00000022245	Skor1	AV273001|C230094B15Rik|Corl1|Lbxcor1	SKI family transcriptional corepressor 1	protein-coding
common_peak2-22780-10-19--0.965512749878593-0.917676348953458	chr14	61439110	61440081	+	0	NA	intron (NM_027436, intron 10 of 18)	MT2_Mm|LTR|ERVL	36192	NR_040642	70478	Mm.274650	NM_027436	ENSMUSG00000021993	Mipep	5730405E07Rik|MIP	mitochondrial intermediate peptidase	protein-coding
unique_peak1-5778-9-2-1.60465090568306-1.87199725847353	chr6	54252372	54252893	+	0	NA	TTS (NM_001163640)	TTS (NM_001163640)	-24374	NM_030024	78004	Mm.41984	NM_030024	ENSMUSG00000045725	Prr15	E130201N16Rik|G90	proline rich 15	protein-coding
common_peak1-9134-13-7-0.778472030637769-0.817533494790411	chr11	75564557	75564963	+	0	NA	intron (NM_009536, intron 1 of 5)	intron (NM_009536, intron 1 of 5)	18371	NM_009536	22627	Mm.234700	NM_009536	ENSMUSG00000020849	Ywhae	AU019196	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide	protein-coding
unique_peak1-4906-11-0-3.50869358425161-3.61235994796777	chr4	45517318	45517891	+	0	NA	intron (NM_001033306, intron 1 of 5)	MIR|SINE|MIR	26096	NM_001033306	230126	Mm.251716	NM_001033306	ENSMUSG00000044813	Shb	BC028832	src homology 2 domain-containing transforming protein B	protein-coding
common_peak1-14303-27-14-1.08465535528672-1.87214134458703	chr2	160075836	160076884	+	0	NA	Intergenic	Intergenic	76870	NM_001033411	329554	Mm.291144	NM_001033411		Gm826	-	predicted gene 826	protein-coding
common_peak2-19775-2-8--2.08737925770563-1.65811743852845	chr1	82808157	82808543	+	0	NA	Intergenic	Intergenic	-27708	NM_010472	15463	Mm.392569	NM_010472	ENSMUSG00000026159	Agfg1	AU045498|C130049H11Rik|C85612|D730048C23Rik|Hrb|RAB|Rip	ArfGAP with FG repeats 1	protein-coding
common_peak1-11322-11-4-1.18676548936425-1.68134727924692	chr15	85614213	85614722	+	0	NA	intron (NM_011144, intron 3 of 7)	L1MEc|LINE|L1	27660	NM_001164626	72355	Mm.33706	NM_197998	ENSMUSG00000064284	Cdpf1	2210021J22Rik	cysteine rich, DPF motif domain containing 1	protein-coding
common_peak1-9194-27-32--0.0528481684632176-0.301029995663997	chr11	79992997	79994078	+	0	NA	Intergenic	B3|SINE|B2	-3837	NM_028019	71956	Mm.22985	NM_028019	ENSMUSG00000020707	Rnf135	0610037N03Rik|2410006N06Rik	ring finger protein 135	protein-coding
common_peak2-30028-10-7-0.356415345008769-1.12966497611638	chr6	125407582	125407992	+	0	NA	Intergenic	Intergenic	36986	NM_007657	12527	Mm.210676	NM_007657	ENSMUSG00000030342	Cd9	Tspan29	CD9 antigen	protein-coding
common_peak1-16435-12-8-0.478850983645327-0.562038191119709	chr5	134644061	134644620	+	0	NA	intron (NM_033572, intron 3 of 10)	intron (NM_033572, intron 3 of 10)	8297	NM_033572	94254	Mm.29508	NM_033572	ENSMUSG00000061979	Wbscr16	5730496C04Rik|AU019812	Williams-Beuren syndrome chromosome region 16 homolog (human)	protein-coding
common_peak2-29484-13-9-0.456543935750406-0.53895475198017	chr6	31099303	31099829	+	0	NA	intron (NR_110471, intron 2 of 3)	intron (NR_110471, intron 2 of 3)	68908	NR_110470	232685	Mm.443019	NM_144555		Lincpint	MNCb-1768|Pint|linc-Pint	long intergenic non-protein coding RNA, Trp53 induced transcript	ncRNA
common_peak2-29850-5-11--1.28934283672701-1.477227296591	chr6	98949923	98950475	+	0	NA	intron (NM_053202, intron 9 of 18)	intron (NM_053202, intron 9 of 18)	28093	NM_001197322	108655	Mm.234965	NM_053202	ENSMUSG00000030067	Foxp1	3110052D19Rik|4932443N09Rik|AI461938|AW494214	forkhead box P1	protein-coding
unique_peak2-32583-6-8--0.60452689106201-1.03789460276074	chr1	89123141	89123524	+	0	NA	intron (NM_023314, intron 6 of 6)	intron (NM_023314, intron 6 of 6)	12818	NM_001039169	26987	Mm.227183	NM_023314	ENSMUSG00000026254	Eif4e2	2700069E09Rik|AI036339|AV129531|D0H0S6743E|Eif4el3	eukaryotic translation initiation factor 4E member 2	protein-coding
common_peak2-19650-6-7--0.434601889619698-0.97990265578305	chr1	44118931	44119350	+	0	NA	Intergenic	Intergenic	40093	NM_029368	75623	Mm.348017	NM_029368	ENSMUSG00000026049	Tex30	1700029F09Rik|3110030D08Rik	testis expressed 30	protein-coding
unique_peak2-33680-2-4--1.23938235115068-0.931118710592187	chr11	102925262	102925680	+	0	NA	intron (NM_008707, intron 10 of 11)	intron (NM_008707, intron 10 of 11)	35595	NM_008707	18107	Mm.10265	NM_008707	ENSMUSG00000020936	Nmt1	AW536594	N-myristoyltransferase 1	protein-coding
unique_peak2-36167-4-6--0.830815435910851-0.989110657569874	chr2	27514350	27514698	+	0	NA	Intergenic	ORR1A3|LTR|MaLR	-18197	NM_011305	20181	Mm.24624	NM_011305	ENSMUSG00000015846	Rxra	9530071D11Rik|Nr2b1|RXRalpha1	retinoid X receptor alpha	protein-coding
unique_peak1-3744-14-1-2.89921616035764-3.91338994363176	chr19	47492736	47493441	+	0	NA	intron (NM_001164717, intron 2 of 13)	intron (NM_001164717, intron 2 of 13)	45813	NM_001164717	14218	Mm.127560	NM_008018	ENSMUSG00000053617	Sh3pxd2a	2310014D11Rik|AA589508|AI256723|AI413738|C230050L11|EG329070|Fish|Gm5098|Sh3md1|TSK5|Tks5	SH3 and PX domains 2A	protein-coding
unique_peak1-5056-12-2-2.06381348436648-2.79529063155376	chr4	135897869	135898643	+	0	NA	3' UTR (NM_001277122, exon 10 of 10)	3' UTR (NM_001277122, exon 10 of 10)	31399	NM_001277123	74326	Mm.31051	NM_028871	ENSMUSG00000066037	Hnrnpr	2610003J05Rik|2610528B01Rik|Hnrpr	heterogeneous nuclear ribonucleoprotein R	protein-coding
unique_peak2-38302-8-7-0.00522241794757061-1.00793137938329	chr6	136540791	136541221	+	0	NA	intron (NM_019426, intron 9 of 14)	intron (NM_019426, intron 9 of 14)	69408	NM_025806	66857	Mm.3311	NM_025806	ENSMUSG00000030214	Plbd1	1100001H23Rik	phospholipase B domain containing 1	protein-coding
common_peak1-13852-51-51-0.374484107461481-0.773583383841042	chr2	61711418	61712760	+	0	NA	Intergenic	L1Md_F2|LINE|L1	69579	NM_009322	21375	Mm.308525	NM_009322	ENSMUSG00000035033	Tbr1	-	T-box brain gene 1	protein-coding
common_peak2-21037-9-7-0.18961340640422-1.05908390183068	chr11	33860531	33861036	+	0	NA	intron (NM_001190886, intron 1 of 7)	intron (NM_001190886, intron 1 of 7)	-2230	NM_031169	16533	Mm.6206	NM_031169	ENSMUSG00000020155	Kcnmb1	BKbeta1	potassium large conductance calcium-activated channel, subfamily M, beta member 1	protein-coding
common_peak1-12313-11-15--0.491306415748387-0.435191258261915	chr17	47383638	47384355	+	0	NA	intron (NM_172622, intron 1 of 16)	B3A|SINE|B2	16817	NM_172622	224829	Mm.260989	NM_172622	ENSMUSG00000064043	Trerf1	9430096I18Rik|AI429294|B830015H24|RAPA|Trep-132|Trep132	transcriptional regulating factor 1	protein-coding
unique_peak1-6-10-3-1.35641534500877-1.75805390616669	chr1	74300922	74301498	+	0	NA	intron (NM_029711, intron 4 of 9)	intron (NM_029711, intron 4 of 9)	18086	NM_029711	76709	Mm.337038	NM_029711	ENSMUSG00000006304	Arpc2	2210023N03Rik|34kDa|p34-Arc	actin related protein 2/3 complex, subunit 2	protein-coding
unique_peak1-2254-18-7-1.31291915122835-1.71830443967823	chr15	77802618	77803488	+	0	NA	Intergenic	Intergenic	-1799	NM_018749	55944	Mm.3955	NM_018749	ENSMUSG00000016554	Eif3d	66/67kDa|AA407891|Eif3s7|eIF3p66	eukaryotic translation initiation factor 3, subunit D	protein-coding
common_peak1-13018-13-23--0.806490470083387-0.781208772652439	chr19	5117868	5118636	+	0	NA	non-coding (NR_045528, exon 1 of 16)	non-coding (NR_045528, exon 1 of 16)	156	NR_045528	16594	Mm.271648	NM_008451	ENSMUSG00000024862	Klc2	8030455F02Rik|AW212649|KLC 2|KLC-2	kinesin light chain 2	protein-coding
common_peak2-28911-16-14-0.211373046659543-0.364171515310935	chr5	92283489	92284207	+	0	NA	Intergenic	Intergenic	-87522	NR_045383	73452	Mm.396233	NR_045383		1700063O14Rik	-	RIKEN cDNA 1700063O14 gene	ncRNA
common_peak2-22180-23-30--0.232428805877794-0.363124929330844	chr12	102282625	102283543	+	0	NA	intron (NM_001160214, intron 10 of 14)	intron (NM_001160214, intron 10 of 14)	-15891	NM_026681	68339	Mm.156217	NM_026681	ENSMUSG00000021182	Ccdc88c	0610010D24Rik|AV000935|AW324073|Daple|mKIAA1509	coiled-coil domain containing 88C	protein-coding
common_peak1-8779-43-68--0.325961271254466-0.599944741495252	chr11	8663597	8664897	+	0	NA	Intergenic	Intergenic	-99709	NM_001083587	319939	Mm.337820	NM_001083587	ENSMUSG00000020422	Tns3	BC023928|F830010I22Rik|TEM6|Tens1	tensin 3	protein-coding
unique_peak1-2106-11-3-1.50869358425161-1.95434855131066	chr15	39670537	39671096	+	0	NA	intron (NM_001164466, intron 4 of 9)	intron (NM_001164466, intron 4 of 9)	18200	NM_001164466	64705	Mm.275974	NM_022722	ENSMUSG00000022304	Dpys	1200017I10Rik|1300004I01Rik|DHP|DHPase	dihydropyrimidinase	protein-coding
unique_peak1-446-9-6-0.382258484346616-1.11707584880836	chr1	166047412	166047869	+	0	NA	intron (NM_011347, intron 1 of 15)	(CA)n|Simple_repeat|Simple_repeat	2245	NM_011347	20344	Mm.3337	NM_011347	ENSMUSG00000026580	Selp	CD62P|GMP-140|Grmp|LECAM3|PADGEM	selectin, platelet	protein-coding
common_peak2-27950-74-103-0.0154468588375156-0.305205968493934	chr4	33247887	33248622	+	0	NA	intron (NM_008075, intron 8 of 9)	intron (NM_008075, intron 8 of 9)	28458	NM_001034867	242377	Mm.372465	NM_001034867		Pm20d2	Acy1l2|Gm424	peptidase M20 domain containing 2	protein-coding
common_peak1-11495-22-33--0.440178736162935-0.541406350295756	chr15	102624945	102625734	+	0	NA	Intergenic	Intergenic	-47999	NR_104334	102216269		NR_104334		Cistr-act	Cistr	chondrogenic regulator lncRNA	ncRNA
common_peak1-18673-20-16-0.400611943340854-0.507611860039817	chr8	118393658	118394698	+	0	NA	Intergenic	Intergenic	-163384	NM_001025577	17132	Mm.275549	NM_001025577		Maf	2810401A20Rik|A230108G15Rik|AW047063|c-maf	avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog	protein-coding
common_peak2-21307-6-6--0.241956811677302-0.947717972411649	chr11	74555862	74556229	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-18159	NM_013625	18472	Mm.397111	NM_013625	ENSMUSG00000020745	Pafah1b1	LIS-1|Lis1|MMS10-U|Mdsh|Ms10u|Pafaha	platelet-activating factor acetylhydrolase, isoform 1b, subunit 1	protein-coding
common_peak2-27118-8-17--1.16470258349474-1.02063122982878	chr3	14641558	14642019	+	0	NA	promoter-TSS (NM_024495)	promoter-TSS (NM_024495)	61	NM_024495	71934	Mm.158776	NM_024495	ENSMUSG00000027555	Car13	2310075C21Rik|Ca13	carbonic anhydrase 13	protein-coding
common_peak1-8018-12-9-0.326847890200276-0.459837087125828	chr1	168502127	168502659	+	0	NA	Intergenic	Intergenic	-74674	NM_001164306	226601	Mm.475593	NM_001164306	ENSMUSG00000086056	Gm4846	EG226601|Fmo13	predicted gene 4846	protein-coding
common_peak2-26080-63-88--0.037420839895808-0.302270843793743	chr2	137116822	137117846	+	0	NA	Intergenic	Intergenic	-175078	NM_013822	16449	Mm.22398	NM_013822	ENSMUSG00000027276	Jag1	ABE2|Gsfabe2|Htu|Ozz|Ser-1	jagged 1	protein-coding
common_peak2-26493-6-13--1.2419568116773-1.58711810488664	chr2	84549308	84549783	+	0	NA	intron (NM_144887, intron 2 of 11)	intron (NM_144887, intron 2 of 11)	5776	NM_144887	228136	Mm.288508	NM_144887	ENSMUSG00000034075	Zdhhc5	1110032A17Rik|AI451382|Zisp	zinc finger, DHHC domain containing 5	protein-coding
common_peak2-25385-8-13--0.802132504110034-0.562038191119711	chr18	85383696	85384245	+	0	NA	Intergenic	MTE2b|LTR|MaLR	-263054	NM_025969	67105	Mm.250617	NM_025969	ENSMUSG00000024645	Timm21	1700034H14Rik|2700002I20Rik	tranlocase of inner mitochondrial membrane 21	protein-coding
common_peak1-12668-16-10-0.658832023630764-0.699649909729472	chr18	36686444	36687317	+	0	NA	promoter-TSS (NM_001271546)	promoter-TSS (NM_001271546)	-926	NM_172830	240215	Mm.135463	NM_172830	ENSMUSG00000024485	Slc4a9	AE4|D630003B07|D630024F24Rik	solute carrier family 4, sodium bicarbonate cotransporter, member 9	protein-coding
unique_peak1-7336-11-1-2.50869358425161-2.83420869758413	chr9	124069303	124069777	+	0	NA	Intergenic	L1Md_F2|LINE|L1	33258	NM_009917	12774	Mm.14302	NM_009917	ENSMUSG00000079227	Ccr5	AM4-7|CD195|Cmkbr5	chemokine (C-C motif) receptor 5	protein-coding
common_peak2-29334-9-10--0.269818212233077-1.05503135781948	chr5	148360882	148361436	+	0	NA	Intergenic	Intergenic	119003	NM_028291	72587	Mm.320469	NM_028291	ENSMUSG00000029647	Pan3	2700050F09Rik|A430027N15Rik|AU014670	PAN3 polyA specific ribonuclease subunit homolog (S. cerevisiae)	protein-coding
common_peak1-17798-61-61-0.428553019362465-1.03375211243225	chr7	99182202	99183553	+	0	NA	intron (NM_011807, intron 10 of 22)	intron (NM_011807, intron 10 of 22)	-28027	NM_001243046	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
unique_peak2-37070-2-6--1.72480917832092-1.26211192963361	chr3	145656853	145657263	+	0	NA	intron (NM_001166064, intron 1 of 6)	intron (NM_001166064, intron 1 of 6)	6224	NM_001166064	214804	Mm.268854	NM_001166064	ENSMUSG00000036863	Syde2	C430017H16Rik	synapse defective 1, Rho GTPase, homolog 2 (C. elegans)	protein-coding
common_peak1-8161-43-19-1.46063509063634-4.27036875499349	chr1	193544264	193545691	+	0	NA	intron (NM_001134829, intron 2 of 7)	intron (NM_001134829, intron 2 of 7)	2703	NM_001134829	226856	Mm.277958	NM_172266	ENSMUSG00000026623	Lpgat1	AI649174|AW112037|BC013667	lysophosphatidylglycerol acyltransferase 1	protein-coding
unique_peak2-34986-15-34--1.11711826638931-1.74023246399357	chr15	99251574	99252824	+	0	NA	TTS (NM_001001884)	TTS (NM_001001884)	28549	NM_001171035	110213	Mm.16769	NM_026669	ENSMUSG00000023010	Tmbim6	5031406P05Rik|Bi1|Tegt	transmembrane BAX inhibitor motif containing 6	protein-coding
unique_peak1-6639-12-8-0.478850983645327-0.562038191119709	chr8	10966492	10967231	+	0	NA	Intergenic	RLTR41|LTR|ERV1	-38404	NR_030715	665306	Mm.358758	NR_030715	ENSMUSG00000038917	3930402G23Rik	-	RIKEN cDNA 3930402G23 gene	ncRNA
common_peak2-21883-27-56--0.841344063269506-1.7405232834637	chr12	111376888	111378617	+	0	NA	Intergenic	B1F|SINE|Alu	18531	NR_045466	67280	Mm.390495	NR_045466		3110009F21Rik	-	RIKEN cDNA 3110009F21 gene	ncRNA
unique_peak1-2150-11-3-1.50869358425161-1.95434855131066	chr15	59025963	59026547	+	0	NA	Intergenic	Intergenic	-112248	NR_045613	100416830	Mm.490788	NR_045613	ENSMUSG00000098528	Zfp572	4930472F24Rik	zinc finger protein 572	pseudo
common_peak2-30239-24-45--0.730352053289296-1.16863888781394	chr7	4811601	4812747	+	0	NA	intron (NM_026158, intron 1 of 5)	RLTR14-int|LTR|ERV1	5607	NM_026158	67441	Mm.41385	NM_026158	ENSMUSG00000052605	Isoc2b	0610042E07Rik|AI553388|Isoc2	isochorismatase domain containing 2b	protein-coding
unique_peak2-39888-8-18--1.24270509549601-1.15812782348128	chrX	75415830	75416524	+	0	NA	Intergenic	L1Md_F3|LINE|L1	45371	NM_001085534	546335	Mm.476683	NM_001085534	ENSMUSG00000079521	Gm5938	EG546335	predicted gene 5938	protein-coding
common_peak2-30726-37-61--0.428203238901056-0.759155512401768	chr7	114254006	114254871	+	0	NA	Intergenic	Intergenic	-4065	NM_001162940	384732	Mm.457863	NM_001162940	ENSMUSG00000062987	Gm10081	EG384732|ENSMUSG00000060503	predicted gene 10081	protein-coding
unique_peak2-35388-5-5--0.289342836727009-0.909929411522249	chr17	30008194	30008548	+	0	NA	intron (NM_001081160, intron 1 of 15)	B2_Mm2|SINE|B2	16456	NM_001081160	74762	Mm.40901	NM_001081160	ENSMUSG00000043557	Mdga1	1200011I03Rik|GPIM|Mamdc3	MAM domain containing glycosylphosphatidylinositol anchor 1	protein-coding
common_peak2-22998-12-11-0.0638134843664826-0.337263207250336	chr14	60250867	60251431	+	0	NA	TTS (NM_145463)	TTS (NM_145463)	7031	NM_145463	219134	Mm.275409	NM_145463	ENSMUSG00000044461	Shisa2	9430059P22Rik|MAd2|Tmem46|mShisa|shisa	shisa homolog 2 (Xenopus laevis)	protein-coding
common_peak2-25439-17-20--0.174021084573723-0.306598483909156	chr19	4000349	4001119	+	0	NA	exon (NM_025529, exon 1 of 4)	exon (NM_025529, exon 1 of 4)	154	NM_025529	66387	Mm.259222	NM_025529	ENSMUSG00000024869	Nudt8	2310039H17Rik	nudix (nucleoside diphosphate linked moiety X)-type motif 8	protein-coding
unique_peak2-35744-5-9--1.02630843089322-1.21398586181642	chr18	37694436	37695091	+	0	NA	intron (NM_001301259, intron 1 of 3)	L1_Mus4|LINE|L1	16756	NM_053147	93893	Mm.348054	NM_053147	ENSMUSG00000073591	Pcdhb22	Pcdhb15|PcdhbV	protocadherin beta 22	protein-coding
common_peak1-13633-40-20-1.26665825997234-3.34149582302667	chr2	25465234	25466643	+	0	NA	intron (NM_029859, intron 10 of 13)	intron (NM_029859, intron 10 of 13)	-1972	NM_001024616	227624	Mm.29600	NM_001024616	ENSMUSG00000015087	Rabl6	B230208H17Rik|Rbel1|Rbel1a|Rbel1b|parf	RAB, member RAS oncogene family-like 6	protein-coding
common_peak2-26106-27-30-0.0373496405083609-0.315041925765932	chr2	4401015	4401834	+	0	NA	intron (NM_172475, intron 3 of 22)	RMER1B|Other|Other	-79376	NM_001177844	209630	Mm.37932	NM_172475	ENSMUSG00000026657	Frmd4a	2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|OTTMUSG00000010806|mKIAA1294	FERM domain containing 4A	protein-coding
common_peak1-18980-6-18--1.68252940306328-1.66449268468235	chr9	56418750	56419272	+	0	NA	Intergenic	MLT1H|LTR|MaLR	114049	NM_181074	235402	Mm.246605	NM_181074	ENSMUSG00000049556	Lingo1	4930471K13Rik|AV148400|LERN1|LINGO-1|Lrrn6a|UNQ201	leucine rich repeat and Ig domain containing 1	protein-coding
common_peak2-27082-22-22-0.123722149030391-0.342639663781856	chr3	57343595	57344391	+	0	NA	intron (NM_133784, intron 2 of 6)	intron (NM_133784, intron 2 of 6)	35805	NM_133784	97064	Mm.405029	NM_133784	ENSMUSG00000027803	Wwtr1	2310058J06Rik|2610021I22Rik|C78399|Taz	WW domain containing transcription regulator 1	protein-coding
common_peak2-30140-53-113--0.691917001748813-2.40127663676259	chr6	143166592	143168142	+	0	NA	Intergenic	Intergenic	-27041	NR_027803	52285	Mm.354898	NM_001033129		D6Ertd474e	1700001I24Rik|AU023129	DNA segment, Chr 6, ERATO Doi 474, expressed	ncRNA
unique_peak1-1335-16-10-0.658832023630764-0.699649909729472	chr12	8853906	8854581	+	0	NA	Intergenic	Intergenic	-73870	NM_008640	17775	Mm.30071	NM_008640	ENSMUSG00000020585	Laptm4a	AA286466|LAPTM4|MTP|Mtrp|mKIAA0108	lysosomal-associated protein transmembrane 4A	protein-coding
unique_peak1-529-14-7-0.899216160357645-0.947446088118041	chr1	185203437	185204130	+	0	NA	Intergenic	Intergenic	318864	NM_016928	53791	Mm.116894	NM_016928	ENSMUSG00000079164	Tlr5	-	toll-like receptor 5	protein-coding
common_peak2-27708-9-13--0.617741515653384-0.459837087125828	chr3	122362765	122363370	+	0	NA	Intergenic	(TTTG)n|Simple_repeat|Simple_repeat	-40435	NM_153118	214459	Mm.209491	NM_153118	ENSMUSG00000039735	Fnbp1l	2610318I01Rik|AW548221|TOCA1|toca-1	formin binding protein 1-like	protein-coding
unique_peak2-37649-8-8--0.164702583494742-1.00793137938329	chr5	90832338	90832730	+	0	NA	Intergenic	Intergenic	36511	NR_045618	791294	Mm.30508	NR_045618	ENSMUSG00000054945	Gm9958	ENSMUSG00000054945	predicted gene 9958	ncRNA
unique_peak2-33282-3-5--0.998945590680433-0.96108193396963	chr11	20529048	20529408	+	0	NA	intron (NM_021372, intron 1 of 1)	intron (NM_021372, intron 1 of 1)	-2752	NM_001038625	58172	Mm.339676	NM_021372	ENSMUSG00000049800	Sertad2	AB041541|AU021878|Kiaa0127|SEI-2|Sei2|TRIP-Br2|mKIAA0127	SERTA domain containing 2	protein-coding
common_peak2-24175-18-5-1.7279566505072-2.39372960542229	chr16	45953372	45953764	+	0	NA	Intergenic	Intergenic	56958	NM_001134480	433022	Mm.380993	NM_001134480	ENSMUSG00000087141	Plcxd2	AW494639|EG433022	phosphatidylinositol-specific phospholipase C, X domain containing 2	protein-coding
common_peak1-10366-63-69-0.309029574125623-0.753034214639445	chr13	91806936	91807971	+	0	NA	intron (NM_024186, intron 5 of 15)	intron (NM_024186, intron 5 of 15)	-73673	NM_028790	74156	Mm.275963	NM_028790	ENSMUSG00000021620	Acot12	1300004O04Rik|4930449F15Rik|AV027244|Cach|mCACH-1	acyl-CoA thioesterase 12	protein-coding
common_peak1-17433-17-26--0.53659116395843-0.538442145997695	chr7	16047808	16048307	+	0	NA	Intergenic	L1Md_T|LINE|L1	73857	NM_145708	246792	Mm.26391	NM_145708	ENSMUSG00000074369	Obox2	-	oocyte specific homeobox 2	protein-coding
common_peak1-19291-18-41--1.07939827155041-1.90347783429882	chr9	120127750	120128420	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	69225	NM_001039364	17433	Mm.486167	NM_008614	ENSMUSG00000032517	Mobp	AI835053|AI839848|MOBP155|MOBP170|MOBP69|MOBP73|MOBP81|R74645	myelin-associated oligodendrocytic basic protein	protein-coding
unique_peak2-39390-5-14--1.61127093161437-1.95509489018123	chr9	22225372	22226167	+	0	NA	intron (NM_026739, intron 1 of 6)	intron (NM_026739, intron 1 of 6)	9748	NM_026739	68283	Mm.280669	NM_026739	ENSMUSG00000036411	9530077C05Rik	1110003N12Rik|Kiaa0895|mKIAA0895	RIKEN cDNA 9530077C05 gene	protein-coding
common_peak1-17889-9-18--1.05831410703937-0.965105923112245	chr7	118740473	118740937	+	0	NA	intron (NM_173739, intron 3 of 10)	intron (NM_173739, intron 3 of 10)	182786	NM_173739	233733	Mm.323322	NM_173739	ENSMUSG00000038296	Galnt18	2900011G21Rik|BC024988|Galntl4	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 18	protein-coding
common_peak2-20765-7-6--0.00826409175941478-0.97990265578305	chr10	116267668	116268021	+	0	NA	intron (NM_001033333, intron 9 of 24)	MER5A|DNA|MER1_type	66091	NM_001033333	237558	Mm.336386	NM_001033333	ENSMUSG00000034057	Myrfl	Gm239	myelin regulatory factor-like	protein-coding
common_peak2-30562-13-21--0.680959587999529-0.607095980551316	chr7	79278828	79279752	+	0	NA	intron (NM_001024703, intron 17 of 22)	intron (NM_001024703, intron 17 of 22)	172191	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding
common_peak1-9719-49-54-0.224924109500524-0.485273987300002	chr12	31634006	31635203	+	0	NA	intron (NR_110343, intron 9 of 10)	Lx9|LINE|L1	38070	NM_013709	24057	Mm.218624	NM_013709	ENSMUSG00000020669	Sh3yl1	AI314953|Ray|YSC84	Sh3 domain YSC-like 1	protein-coding
unique_peak2-35021-6-4-0.24347001549294-0.989110657569874	chr15	102188680	102188976	+	0	NA	exon (NM_130458, exon 2 of 2)	exon (NM_130458, exon 2 of 2)	-7638	NM_153416	223921	Mm.352946	NM_153416	ENSMUSG00000036678	Aaas	AAA|ADRACALA|D030041N15Rik|GL003	achalasia, adrenocortical insufficiency, alacrimia	protein-coding
unique_peak1-178-9-4-0.867685311516858-1.36011389749466	chr1	74312107	74312639	+	0	NA	intron (NM_029711, intron 9 of 9)	B1_Mus2|SINE|Alu	-12801	NM_174985	227289	Mm.246587	NM_174985	ENSMUSG00000064272	Gpbar1	BG37|GPCR|GPR131|M-BAR|TGR5	G protein-coupled bile acid receptor 1	protein-coding
unique_peak2-38654-1-11--3.2120195109379-2.83420869758413	chr7	97331569	97332186	+	0	NA	intron (NM_146194, intron 13 of 20)	L1_Mus3|LINE|L1	53135	NM_001252520	233489	Mm.235175	NM_146194	ENSMUSG00000039361	Picalm	CALM|CLTH|PAP180|fit-1|fit1|mKIAA4114	phosphatidylinositol binding clathrin assembly protein	protein-coding
common_peak1-12090-25-27-0.0544949832875021-0.316543811862083	chr17	24855091	24856339	+	0	NA	promoter-TSS (NM_026205)	promoter-TSS (NM_026205)	-713	NM_026205	67504	Mm.46159	NM_026205	ENSMUSG00000008482	Rnf151	1700010O16Rik|AV047371	ring finger protein 151	protein-coding
unique_peak2-32797-8-25--1.69521730019352-2.29727994934156	chr1	182257659	182258369	+	0	NA	non-coding (NR_003623, exon 1 of 1)	non-coding (NR_003623, exon 1 of 1)	-2593	NM_001081175	320404	Mm.132535	NM_001081175	ENSMUSG00000038855	Itpkb	1110033J02Rik|E130307H12Rik	inositol 1,4,5-trisphosphate 3-kinase B	protein-coding
unique_peak1-3192-18-8-1.14299414978604-1.45476480588849	chr18	53261544	53262538	+	0	NA	Intergenic	B3A|SINE|B2	-73978	NM_026386	67804	Mm.252171	NM_026386	ENSMUSG00000034484	Snx2	0610030A03Rik	sorting nexin 2	protein-coding
unique_peak2-33371-7-11--0.785871670422967-1.21681515183528	chr11	39590912	39591450	+	0	NA	Intergenic	Intergenic	915003	NM_134017	108645	Mm.293771	NM_134017	ENSMUSG00000042032	Mat2b	1110064C04Rik|2410018D16Rik|AI182287|AU022853|MAT-II|MATIIbeta|TGR	methionine adenosyltransferase II, beta	protein-coding
unique_peak2-37343-2-6--1.72480917832092-1.26211192963361	chr4	132388917	132389275	+	0	NA	intron (NM_001290725, intron 3 of 6)	intron (NM_001290725, intron 3 of 6)	9988	NM_001290725	100336	Mm.105230	NM_146154	ENSMUSG00000028882	Ppp1r8	6330548N22Rik|AU044684|NIPP1	protein phosphatase 1, regulatory (inhibitor) subunit 8	protein-coding
unique_peak2-33035-4-5--0.608423014574403-0.909929411522249	chr10	70056469	70056839	+	0	NA	intron (NM_178621, intron 1 of 4)	intron (NM_178621, intron 1 of 4)	-1094	NM_001162846	70911	Mm.19825	NM_178621	ENSMUSG00000037747	Phyhipl	4921522K17Rik|AI267048	phytanoyl-CoA hydroxylase interacting protein-like	protein-coding
unique_peak2-39536-10-16--0.73104749624157-0.604422558181019	chr9	66990344	66991016	+	0	NA	intron (NR_045748, intron 1 of 2)	L1Md_F2|LINE|L1	9312	NR_045748	100502636	Mm.412607	NR_045748		Gm19299	-	predicted gene, 19299	ncRNA
common_peak1-16275-66-67-0.431020823175502-1.15814843603165	chr5	108668799	108670036	+	0	NA	Intergenic	B2_Mm1a|SINE|B2	-28499	NM_026106	13486	Mm.303534	NM_026106	ENSMUSG00000029265	Dr1	1700121L09Rik|Dr1l|NC2|NC2beta	down-regulator of transcription 1	protein-coding
unique_peak2-37208-8-10--0.454209200689727-1.078512453669	chr4	70534344	70534929	+	0	NA	Intergenic	L1M4|LINE|L1	-338674	NM_172694	230316	Mm.251188	NM_172694		Megf9	4933405H16Rik|9630025C07|Egfl5|mKIAA0818	multiple EGF-like-domains 9	protein-coding
common_peak1-16797-38-46-0.0168638076208927-0.31027100108714	chr6	42691779	42693284	+	0	NA	Intergenic	Intergenic	-1507	NM_001011799	258016	Mm.377328	NM_001011799	ENSMUSG00000095831	Olfr453	MOR257-8P	olfactory receptor 453	protein-coding
unique_peak1-1809-9-0-3.18961340640422-3.01029995663981	chr14	26539496	26539946	+	0	NA	intron (NM_001101433, intron 2 of 3)	intron (NM_001101433, intron 2 of 3)	-18953	NR_028021	68173	Mm.444727	NM_026595		Ppifos	4930520F12Rik|Ppifs	peptidylprolyl isomerase F, opposite strand	ncRNA
unique_peak1-3459-8-2-1.42025991722641-1.65811743852845	chr19	9099118	9099482	+	0	NA	intron (NR_104460, intron 4 of 6)	(CAAA)n|Simple_repeat|Simple_repeat	35526	NM_001286518	66395	Mm.203866	NM_009643	ENSMUSG00000069833	Ahnak	DY6	AHNAK nucleoprotein (desmoyokin)	protein-coding
common_peak2-19877-8-8--0.164702583494742-1.00793137938329	chr1	93669002	93669378	+	0	NA	Intergenic	Intergenic	-28864	NM_007855	13345	Mm.9474	NM_007855	ENSMUSG00000007805	Twist2	Dermo1|bHLHa39	twist basic helix-loop-helix transcription factor 2	protein-coding
common_peak2-23884-26-29-0.0210084965499435-0.304710633611964	chr16	38452558	38453328	+	0	NA	promoter-TSS (NM_007414)	promoter-TSS (NM_007414)	-174	NM_007414	11544	Mm.20047	NM_007414	ENSMUSG00000002844	Adprh	Arh1	ADP-ribosylarginine hydrolase	protein-coding
common_peak2-23102-26-36--0.281554273470488-0.419637632935626	chr14	77036166	77037219	+	0	NA	Intergenic	Intergenic	-40683	NR_015485	73272	Mm.116804	NR_015485		1700108F19Rik	1700020I02Rik|BB065030	RIKEN cDNA 1700108F19 gene	ncRNA
unique_peak2-35995-0-5--3.42509343119537-1.32905871926422	chr19	32501963	32502369	+	0	NA	Intergenic	RLTR24|LTR|ERV1	38460	NR_033198	67188	Mm.391160	NR_033198	ENSMUSG00000097787	2700046G09Rik	-	RIKEN cDNA 2700046G09 gene	ncRNA
common_peak2-22683-71-111--0.162910743337632-0.425611658269827	chr13	98316217	98317328	+	0	NA	Intergenic	Intergenic	-13183	NR_046157	328314	Mm.138047	NR_046157		Gm5086	B230311A21|EG328314	predicted gene 5086	ncRNA
unique_peak2-39451-3-5--0.998945590680433-0.96108193396963	chr9	49055768	49056082	+	0	NA	Intergenic	Intergenic	-2711	NM_177701	235327	Mm.246604	NM_177701		Gm4894	A430041E03|EG235327	predicted gene 4894	protein-coding
common_peak1-15948-28-13-1.24560419776386-2.25377313481387	chr5	29860554	29861617	+	0	NA	Intergenic	MYSERV16_I-int|LTR|ERVK	-3404	NR_102704	619355	Mm.426744	NR_102704		Gm6083	ENSMUSG00000078182	developmental pluripotency associated 5 pseudogene	pseudo
unique_peak2-39869-3-5--0.998945590680433-0.96108193396963	chrX	73786020	73786454	+	0	NA	Intergenic	Intergenic	62026	NM_001201395	74987	Mm.107996	NM_001201395	ENSMUSG00000079525	4930468A15Rik	-	RIKEN cDNA 4930468A15 gene	protein-coding
common_peak1-9141-42-62--0.234950595632733-0.420930521695299	chr11	75679057	75680135	+	0	NA	intron (NM_029548, intron 4 of 7)	intron (NM_029548, intron 4 of 7)	44965	NM_029548	380714	Mm.425697	NM_029548	ENSMUSG00000020847	Rph3al	Gm1753|Noc2	rabphilin 3A-like (without C2 domains)	protein-coding
unique_peak1-4634-7-2-1.21412832957703-1.45399745587252	chr3	85977658	85978170	+	0	NA	Intergenic	Intergenic	-31324	NM_016959	20091	Mm.399829	NM_016959	ENSMUSG00000028081	Rps3a1	Rps3a	ribosomal protein S3A1	protein-coding
common_peak2-30820-20-34--0.641208232353773-0.863762398024911	chr7	128739770	128740874	+	0	NA	Intergenic	Intergenic	-6972	NR_102286	75793	Mm.23397	NR_102286		4933432K03Rik	1700001C18Rik|4930433G11Rik|AI428127	RIKEN cDNA 4933432K03 gene	ncRNA
unique_peak2-35611-6-7--0.434601889619698-0.97990265578305	chr17	84109800	84110215	+	0	NA	intron (NM_001171053, intron 2 of 13)	intron (NM_001171053, intron 2 of 13)	4504	NM_001171052	116871	Mm.277668	NM_054082	ENSMUSG00000055817	Mta3	1110002J22Rik|mKIAA1266	metastasis associated 3	protein-coding
common_peak1-18657-36-35-0.309396084725442-0.573175361577103	chr8	113635310	113636154	+	0	NA	intron (NM_198308, intron 3 of 17)	B1_Mur1|SINE|Alu	17087	NM_198308	319518	Mm.28350	NM_198308		Pdpr	4930402E16Rik|AU018056|mKIAA1990	pyruvate dehydrogenase phosphatase regulatory subunit	protein-coding
unique_peak2-34638-2-7--1.91745425626332-1.45399745587252	chr14	99550156	99550520	+	0	NA	intron (NM_029320, intron 10 of 17)	L1ME2|LINE|L1	-51349	NM_028315	72662	Mm.163339	NM_028315	ENSMUSG00000033166	Dis3	2810028N01Rik	DIS3 mitotic control homolog (S. cerevisiae)	protein-coding
unique_peak1-3289-9-0-3.18961340640422-3.01029995663981	chr18	75193331	75193935	+	0	NA	intron (NM_027727, intron 1 of 16)	ORR1C1|LTR|MaLR	15207	NM_027727	69190	Mm.173826	NM_027727	ENSMUSG00000035765	Dym	1810041M12Rik|4933427L07Rik|C030019K18Rik	dymeclin	protein-coding
common_peak1-8425-22-13-0.8399291830298-1.1381569562463	chr10	76468266	76469409	+	0	NA	Intergenic	Intergenic	-5903	NR_045882	100038479	Mm.387034	NR_045882	ENSMUSG00000074919	Gm10787	ENSMUSG00000074919	predicted gene 10787	ncRNA
common_peak1-10578-54-73--0.0363676039992162-0.302527574714518	chr14	26533892	26536075	+	0	NA	intron (NM_001101433, intron 3 of 3)	intron (NM_001101433, intron 3 of 3)	-14215	NR_028021	68173	Mm.444727	NM_026595		Ppifos	4930520F12Rik|Ppifs	peptidylprolyl isomerase F, opposite strand	ncRNA
unique_peak1-1398-10-2-1.77145284428761-2.09384600808989	chr12	69998606	69999134	+	0	NA	Intergenic	RLTR23|LTR|ERV1	261303	NM_009093	20090	Mm.379006	NM_009093	ENSMUSG00000034892	Rps29	-	ribosomal protein S29	protein-coding
common_peak2-28362-36-62--0.497958837332162-0.890023188174771	chr4	136469546	136470850	+	0	NA	Intergenic	B3A|SINE|B2	-15439	NM_007572	12259	Mm.439957	NM_007572	ENSMUSG00000036887	C1qa	AI255395|C1q	complement component 1, q subcomponent, alpha polypeptide	protein-coding
common_peak2-22751-14-21--0.560215458279653-0.519193887192484	chr13	112926807	112927521	+	0	NA	Intergenic	ORR1B2|LTR|MaLR	-151495	NM_001168403	77318	Mm.159895	NM_029898	ENSMUSG00000049985	Ankrd55	C030011J08Rik	ankyrin repeat domain 55	protein-coding
unique_peak1-3953-30-9-1.84774731460451-4.06788929322894	chr2	30265979	30267544	+	0	NA	intron (NM_007760, intron 2 of 13)	intron (NM_007760, intron 2 of 13)	4507	NM_007760	12908	Mm.20396	NM_007760	ENSMUSG00000026853	Crat	AW107812|CARAT	carnitine acetyltransferase	protein-coding
common_peak1-16609-27-23-0.40658345017408-0.622271369641148	chr5	151142563	151143722	+	0	NA	intron (NM_172887, intron 4 of 60)	CT-rich|Low_complexity|Low_complexity	80637	NM_172887	320365	Mm.216590	NM_172887	ENSMUSG00000056602	Fry	13CDNA73|9330186A19Rik|AF346502|AI462658|C87180|D930046M03|cg003|mKIAA4143	furry homolog (Drosophila)	protein-coding
unique_peak2-38971-10-16--0.73104749624157-0.604422558181019	chr8	35376439	35377285	+	0	NA	Intergenic	Intergenic	-147096	NR_105820	102465211		NR_105820	miRBase:MI0021930	Mir6395	mmu-mir-6395	microRNA mir-6395	ncRNA
unique_peak2-34209-4-6--0.830815435910851-0.989110657569874	chr13	43211900	43212357	+	0	NA	intron (NM_001005740, intron 8 of 12)	intron (NM_001005740, intron 8 of 12)	-6080	NM_001005748	218194	Mm.160124	NM_198419	ENSMUSG00000054728	Phactr1	9630030F18Rik|Rpel1	phosphatase and actin regulator 1	protein-coding
common_peak1-18900-70-112--0.200212046039789-0.503851147901832	chr9	37488538	37490008	+	0	NA	Intergenic	B4|SINE|B4	-12466	NM_172454	208098	Mm.217159	NM_172454	ENSMUSG00000011118	Panx3	3230401P04|4833413G11Rik	pannexin 3	protein-coding
common_peak2-32041-15-25--0.688274967585436-0.73354163167379	chr9	78821629	78821976	+	0	NA	Intergenic	L1Md_A|LINE|L1	358449	NM_153098	235505	Mm.32955	NM_153098	ENSMUSG00000046186	Cd109	9930012E15Rik|AI480638|GARP	CD109 antigen	protein-coding
unique_peak1-5397-12-3-1.64877598508764-2.36932189928148	chr5	104377700	104378427	+	0	NA	Intergenic	IAPEy-int|LTR|ERVK	28344	NM_198030	243168	Mm.284944	NM_198030	ENSMUSG00000034528	Hsd17b13	AI047820|PAN1B-like|Pan1b	hydroxysteroid (17-beta) dehydrogenase 13	protein-coding
unique_peak2-39839-1-6--2.43441193227435-1.56314192529759	chrX	52912842	52913309	+	0	NA	Intergenic	MMERVK10C-int|LTR|ERVK	108302	NM_001220497	100039055	Mm.380174	NM_001220497		Gm16404	EG625711	predicted gene 16404	protein-coding
common_peak2-30164-87-106-0.254170119380023-0.750836180054853	chr6	147475461	147477056	+	0	NA	intron (NM_025911, intron 3 of 12)	RMER19B|LTR|ERVK	51865	NM_025911	67015	Mm.209774	NM_025911	ENSMUSG00000030301	Ccdc91	1700086G08Rik|1810060J02Rik|AU045683|AW555238|p56	coiled-coil domain containing 91	protein-coding
unique_peak2-34216-4-6--0.830815435910851-0.989110657569874	chr13	45749129	45749486	+	0	NA	intron (NM_001199304, intron 5 of 6)	intron (NM_001199304, intron 5 of 6)	146469	NM_025508	66355	Mm.290802	NM_025508	ENSMUSG00000000253	Gmpr	2310004P21Rik|AV028449	guanosine monophosphate reductase	protein-coding
common_peak1-7465-54-25-1.47264604348864-5.46052131109667	chr1	155073438	155075143	+	0	NA	intron (NM_010683, intron 25 of 27)	B1_Mm|SINE|Alu	-40713	NM_008485	16782	Mm.329272	NM_008485	ENSMUSG00000026479	Lamc2	AA589349	laminin, gamma 2	protein-coding
unique_peak2-33711-2-7--1.91745425626332-1.45399745587252	chr11	110358623	110359094	+	0	NA	intron (NM_011943, intron 8 of 11)	intron (NM_011943, intron 8 of 11)	98422	NM_011943	26399	Mm.14487	NM_011943	ENSMUSG00000020623	Map2k6	MEK6|MKK6|Prkmk6|SAPKK3	mitogen-activated protein kinase kinase 6	protein-coding
unique_peak2-37202-10-12--0.344024373132323-0.340565874754526	chr4	62519811	62520418	+	0	NA	Intergenic	RMER1A|Other|Other	-106494	NM_028326	72701	Mm.26479	NM_028326	ENSMUSG00000028358	Zfp618	2810031P15Rik|2810040O04Rik|AI415580|AI505139|D430033D05Rik|Nedd10|Znf618|bM257P7.1	zinc finger protein 618	protein-coding
unique_peak1-2947-11-6-0.701338662194009-1.32595962126035	chr17	66750804	66751328	+	0	NA	intron (NM_001114098, intron 3 of 14)	intron (NM_001114098, intron 3 of 14)	48024	NM_172963	68617	Mm.33421	NM_172963	ENSMUSG00000052105	Mtcl1	1110012J17Rik|Ccdc165|D130071O13|Kiaa0802|Soga2|mKIAA0802|t8219b25	microtubule crosslinking factor 1	protein-coding
unique_peak2-38016-9-7-0.18961340640422-1.05908390183068	chr6	31339436	31340049	+	0	NA	intron (NR_040300, intron 2 of 2)	intron (NR_040300, intron 2 of 2)	9031	NR_040300	100503869	Mm.370532	NR_040300	ENSMUSG00000086212	Mkln1os	Gm13845|OTTMUSG00000014733	muskelin 1, intracellular mediator containing kelch motifs, opposite strand	ncRNA
common_peak2-21252-13-13--0.0288828914198356-0.309074325783021	chr11	69095285	69095996	+	0	NA	Intergenic	Lx3_Mus|LINE|L1	41735	NM_172560	216846	Mm.28774	NM_172560	ENSMUSG00000032782	Cntrob	9830165K03Rik|Lip8	centrobin, centrosomal BRCA2 interacting protein	protein-coding
common_peak1-12790-17-22--0.305265617851975-0.348739088570342	chr18	64185983	64186801	+	0	NA	Intergenic	Intergenic	-227621	NM_009182	20451	Mm.252110	NM_009182	ENSMUSG00000056812	St8sia3	AI847333|ST8SiaIII|Siat8c	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	protein-coding
common_peak1-13371-25-30--0.0923464050417691-0.304710633611958	chr19	46305240	46306266	+	0	NA	intron (NM_178930, intron 3 of 39)	L1MD|LINE|L1	-73474	NM_001177369	18034	Mm.102365	NM_019408	ENSMUSG00000025225	Nfkb2	NF-kappaB2|lyt|p49|p49/p100|p50B|p52	nuclear factor of kappa light polypeptide gene enhancer in B cells 2, p49/p100	protein-coding
unique_peak1-4697-13-3-1.77847203063777-2.58603100924543	chr3	98197966	98198526	+	0	NA	intron (NM_172863, intron 1 of 2)	B1_Mur3|SINE|Alu	11842	NM_172863	242109	Mm.358911	NM_172863	ENSMUSG00000050064	Zfp697	9430053K19|AI467503|Znf697	zinc finger protein 697	protein-coding
common_peak1-17731-10-24--1.28744084476596-1.59083646988122	chr7	80374916	80375434	+	0	NA	Intergenic	Intergenic	-80091	NR_105062	100505025	Mm.445959	NR_105062		LOC100505025	-	uncharacterized LOC100505025	ncRNA
common_peak1-19352-15-10-0.552733131918359-0.604422558181019	chrX	8892940	8893527	+	0	NA	Intergenic	RMER30|DNA|MER1_type	32343	NM_029588	76383	Mm.440761	NM_029588	ENSMUSG00000096571	1700012L04Rik	H2al1	RIKEN cDNA 1700012L04 gene	protein-coding
unique_peak2-36374-1-5--2.2120195109379-1.32905871926422	chr2	117542430	117542787	+	0	NA	Intergenic	Intergenic	-105056	NR_040631	73938	Mm.399107	NR_040631	ENSMUSG00000086221	4930412B13Rik	-	RIKEN cDNA 4930412B13 gene	ncRNA
common_peak2-29420-61-38-1.09734711088709-4.02388800136817	chr6	5442327	5443754	+	0	NA	intron (NM_013743, intron 2 of 10)	Lx3A|LINE|L1	3238	NM_013743	27273	Mm.235547	NM_013743	ENSMUSG00000019577	Pdk4	AV005916	pyruvate dehydrogenase kinase, isoenzyme 4	protein-coding
common_peak1-13877-15-11-0.4272022498345-0.503257505534083	chr2	72287216	72287855	+	0	NA	Intergenic	RLTR24|LTR|ERV1	-26741	NM_025866	66953	Mm.270676	NM_025866	ENSMUSG00000055612	Cdca7	2310021G01Rik|AU044109|JPO1	cell division cycle associated 7	protein-coding
common_peak1-17427-14-12-0.198776442216552-0.373562084705529	chr7	13024315	13024997	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-16816	NM_001033820	619331	Mm.361832	NM_001033820	ENSMUSG00000034071	Zfp551	9630004E07Rik|Znf551	zinc fingr protein 551	protein-coding
unique_peak2-39618-5-8--0.874305337448166-1.10484139239135	chr9	89906887	89907335	+	0	NA	intron (NM_011245, intron 22 of 26)	intron (NM_011245, intron 22 of 26)	-41994	NM_007801	13036	Mm.2277	NM_007801	ENSMUSG00000032359	Ctsh	AL022844	cathepsin H	protein-coding
common_peak1-14622-9-7-0.18961340640422-1.05908390183068	chr3	52889010	52889531	+	0	NA	intron (NM_175386, intron 2 of 3)	intron (NM_175386, intron 2 of 3)	43801	NM_175386	108927	Mm.118617	NM_175386	ENSMUSG00000048332	Lhfp	2810489O06Rik|AI194968	lipoma HMGIC fusion partner	protein-coding
common_peak2-24422-28-30-0.0987628094345876-0.332062764479303	chr17	17234765	17235608	+	0	NA	Intergenic	Lx3_Mus|LINE|L1	-23161	NM_011765	22759	Mm.436633	NM_011765	ENSMUSG00000095990	Zfp97	NGD16-4	zinc finger protein 97	protein-coding
common_peak2-20587-43-51-0.082123467382611-0.333814721158537	chr10	78412280	78413220	+	0	NA	Intergenic	Lx4A|LINE|L1	-5202	NM_207201	18372	Mm.391567	NM_207201	ENSMUSG00000094080	Olfr8	GA_x5J8B7TNKDU-1250-1574|MOR139-5P	olfactory receptor 8	protein-coding
unique_peak1-5610-9-3-1.18961340640422-1.57096726280955	chr6	99843665	99844114	+	0	NA	Intergenic	G-rich|Low_complexity|Low_complexity	-167503	NM_001170419	50501	Mm.87365	NM_015768	ENSMUSG00000030069	Prok2	Bv8|PK2|Prok1	prokineticin 2	protein-coding
unique_peak2-36770-5-10--1.16381195464315-1.33892459842472	chr3	67504641	67505129	+	0	NA	Intergenic	B3|SINE|B2	118195	NM_025813	66868	Mm.491153	NM_025813	ENSMUSG00000027775	Mfsd1	1200003O06Rik	major facilitator superfamily domain containing 1	protein-coding
unique_peak2-37144-5-6--0.511735258063458-0.947717972411649	chr4	32250261	32250653	+	0	NA	Intergenic	Intergenic	199375	NM_172688	26409	Mm.258589	NM_009316	ENSMUSG00000028284	Map3k7	B430101B05|C87327|Tak1	mitogen-activated protein kinase kinase kinase 7	protein-coding
unique_peak2-33430-1-15--3.62705701021674-3.91338994363176	chr11	60699431	60700311	+	0	NA	Intergenic	Intergenic	-7331	NM_001168507	216821	Mm.28063	NM_173453	ENSMUSG00000043284	Tmem11	5730466P16Rik|AA409091	transmembrane protein 11	protein-coding
common_peak1-8245-27-57--0.866435044232336-1.84665509793009	chr10	18055500	18056483	+	0	NA	Intergenic	Intergenic	-71490	NM_173390	215819	Mm.297971	NM_173390	ENSMUSG00000039835	Nhsl1	5730409E15Rik|A630035H13Rik|A730096F01|BC013565|D10Bwg0940e|mKIAA1357	NHS-like 1	protein-coding
unique_peak1-270-14-3-1.89921616035764-2.80787975886178	chr1	95498811	95499155	+	0	NA	intron (NM_145519, intron 14 of 26)	intron (NM_145519, intron 14 of 26)	33321	NM_021537	59041	Mm.28761	NM_021537	ENSMUSG00000026277	Stk25	1500019J11Rik|AU018434|C86992|Ste20-like|Ysk1	serine/threonine kinase 25 (yeast)	protein-coding
common_peak2-32383-21-29--0.337401330342283-0.403610417161439	chrX	113184647	113185575	+	0	NA	Intergenic	Intergenic	-377442	NM_001033471	382239	Mm.336224	NM_001033471	ENSMUSG00000072995	Cpxcr1	Gm1143	CPX chromosome region, candidate 1	protein-coding
unique_peak1-3124-26-7-1.92789909215846-3.64499996644214	chr18	35346796	35347882	+	0	NA	intron (NM_009818, intron 7 of 17)	intron (NM_009818, intron 7 of 17)	27339	NM_178005	107065	Mm.39900	NM_178005	ENSMUSG00000071862	Lrrtm2	AI851755|BB129880|C630011A14Rik|mKIAA0416	leucine rich repeat transmembrane neuronal 2	protein-coding
common_peak1-10014-18-14-0.406028555619833-0.532159081577619	chr13	6194031	6194939	+	0	NA	Intergenic	Intergenic	333750	NM_011803	23849	Mm.275036	NM_011803	ENSMUSG00000000078	Klf6	AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9	Kruppel-like factor 6	protein-coding
common_peak2-31526-141-215-0.0781533344693974-0.383881355946508	chr8	109778110	109779787	+	0	NA	Intergenic	Intergenic	-38422	NM_018823	54446	Mm.390057	NM_018823	ENSMUSG00000003847	Nfat5	AI225870|B130038B15Rik|CAG-8|CAG80|NFATL1|OREBP|TonEBP|mKIAA0827|nfatz	nuclear factor of activated T cells 5	protein-coding
unique_peak2-34215-2-6--1.72480917832092-1.26211192963361	chr13	45402723	45403143	+	0	NA	Intergenic	Intergenic	-82178	NM_153789	218203	Mm.212855	NM_153789	ENSMUSG00000038175	Mylip	9430057C20Rik|Mir	myosin regulatory light chain interacting protein	protein-coding
common_peak1-9902-25-16-0.774387064094767-1.1282783422172	chr12	86800015	86801017	+	0	NA	Intergenic	RMER15|LTR|ERVL	-14335	NM_010234	14281	Mm.246513	NM_010234	ENSMUSG00000021250	Fos	D12Rfj1|c-fos|cFos	FBJ osteosarcoma oncogene	protein-coding
common_peak1-12318-20-10-1.0286431659539-1.30248952876293	chr17	47504567	47505384	+	0	NA	promoter-TSS (NM_001146212)	promoter-TSS (NM_001146212)	-861	NM_001146212	64657	Mm.216250	NM_183086	ENSMUSG00000034729	Mrps10	1110038B19Rik|AW743084|Rpms10	mitochondrial ribosomal protein S10	protein-coding
common_peak1-10778-24-15-0.793209902767717-1.16796998271032	chr14	73388647	73389573	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-36300	NR_027860	668489	Mm.158324	NR_027860		Gm9199	EG668489	glycine cleavage system protein H (aminomethyl carrier) pseudogene	pseudo
common_peak2-24845-14-26--0.855671341805824-0.949797625454538	chr17	74796959	74797774	+	0	NA	intron (NM_144798, intron 1 of 13)	L1Md_F2|LINE|L1	2418	NM_144798	210148	Mm.243943	NM_144798	ENSMUSG00000024069	Slc30a6	9530029F08Rik|ZnT6	solute carrier family 30 (zinc transporter), member 6	protein-coding
unique_peak1-410-17-10-0.75886471956774-0.917676348953458	chr1	157080776	157081558	+	0	NA	Intergenic	Intergenic	75334	NM_021433	58244	Mm.66264	NM_021433	ENSMUSG00000026470	Stx6	2310039E05Rik|2410005I16Rik|AA437559|AI415714|AI845861	syntaxin 6	protein-coding
unique_peak1-1161-7-6--0.00826409175941478-0.97990265578305	chr11	99095183	99095701	+	0	NA	3' UTR (NM_172946, exon 6 of 6)	3' UTR (NM_172946, exon 6 of 6)	-3111	NM_020618	57376	Mm.379086	NM_020618	ENSMUSG00000037935	Smarce1	2810417B20Rik|5830412H02Rik|9030408N19Rik|Baf27	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	protein-coding
common_peak2-31248-7-13--1.00826409175941-0.697979855752659	chr8	70607989	70608409	+	0	NA	Intergenic	Intergenic	-109726	NM_177698	234353	Mm.32525	NM_027626	ENSMUSG00000030465	Psd3	4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D	pleckstrin and Sec7 domain containing 3	protein-coding
unique_peak2-37703-0-7--3.84013093047421-1.80617997398389	chr5	103425215	103425621	+	0	NA	intron (NM_001081567, intron 5 of 13)	intron (NM_001081567, intron 5 of 13)	214935	NM_001081567	26414	Mm.39253	NM_009158	ENSMUSG00000046709	Mapk10	C230008H04Rik|JNK3|JNK3B1|JNK3B2|SAPK(beta)|Serk2|p493F12|p54bSAPK	mitogen-activated protein kinase 10	protein-coding
common_peak1-11765-37-59--0.3808975241227-0.651432082277441	chr16	42875907	42876878	+	0	NA	promoter-TSS (NR_040522)	promoter-TSS (NR_040522)	-517	NR_040522	75722	Mm.243747	NR_040521	ENSMUSG00000075070	4932412D23Rik	ENSMUSG00000075070|Gm10809	RIKEN cDNA 4932412D23 gene	ncRNA
common_peak1-8633-30-55--0.637679512565731-1.16883084967252	chr10	121586086	121587189	+	0	NA	Intergenic	Intergenic	29884	NR_027637	100043513	Mm.429141	NR_027637		Gm4489	Gm241	predicted gene 4489	ncRNA
common_peak2-24108-11-14--0.398197011356905-0.379391706698377	chr16	32745384	32745741	+	0	NA	intron (NM_080457, intron 1 of 26)	RSINE1|SINE|B4	9590	NM_080457	140474	Mm.214599	NM_080457	ENSMUSG00000079620	Muc4	4933405I11Rik|Asgp	mucin 4	protein-coding
common_peak2-30611-14-49--1.74464002941708-4.4324081904224	chr7	89632342	89633176	+	0	NA	intron (NM_001190374, intron 7 of 29)	PB1D7|SINE|Alu	148555	NM_001190374	269959	Mm.65306	NM_001190374	ENSMUSG00000070469	Adamtsl3	9230119C12Rik|C130057K09|mKIAA1233	ADAMTS-like 3	protein-coding
unique_peak1-6236-14-0-3.89921616035764-4.8164799306237	chr7	16018749	16019352	+	0	NA	Intergenic	Intergenic	44850	NM_145708	246792	Mm.26391	NM_145708	ENSMUSG00000074369	Obox2	-	oocyte specific homeobox 2	protein-coding
common_peak2-32025-11-18--0.739233929191972-0.671582559449692	chr9	75773852	75774476	+	0	NA	Intergenic	(TA)n|Simple_repeat|Simple_repeat	-88620	NM_173731	208982	Mm.82306	NM_173731	ENSMUSG00000007908	Hmgcll1	BC037381	3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1	protein-coding
common_peak1-9663-9-17--0.980311595038092-0.844317084070804	chr12	3364828	3365350	+	0	NA	promoter-TSS (NM_008445)	promoter-TSS (NM_008445)	-43	NM_008445	16570	Mm.7688	NM_008445	ENSMUSG00000020668	Kif3c	mKIAA4058	kinesin family member 3C	protein-coding
unique_peak2-33097-2-6--1.72480917832092-1.26211192963361	chr10	80577480	80577822	+	0	NA	intron (NM_023138, intron 2 of 10)	intron (NM_023138, intron 2 of 10)	8959	NM_023138	26396	Mm.275436	NM_023138	ENSMUSG00000035027	Map2k2	AA589381|MEK2|MK2|Prkmk2	mitogen-activated protein kinase kinase 2	protein-coding
unique_peak2-34507-3-8--1.58390809140159-1.39487600375387	chr14	50807470	50807862	+	0	NA	promoter-TSS (NM_146493)	promoter-TSS (NM_146493)	-773	NM_146493	258486	Mm.377529	NM_146493	ENSMUSG00000050431	Olfr730	MOR247-1	olfactory receptor 730	protein-coding
common_peak2-23641-9-13--0.617741515653384-0.459837087125828	chr15	83565144	83565657	+	0	NA	Intergenic	Intergenic	-9931	NM_022723	64706	Mm.40393	NM_022723	ENSMUSG00000016763	Scube1	7330410C13Rik|A630023E24Rik	signal peptide, CUB domain, EGF-like 1	protein-coding
common_peak2-32217-36-73--0.730132279461196-1.75762453057467	chr9	121856795	121858442	+	0	NA	Intergenic	Intergenic	-2488	NM_177743	245050	Mm.71062	NM_177743	ENSMUSG00000038233	Fam198a	C730027P07Rik	family with sequence similarity 198, member A	protein-coding
common_peak2-25929-8-13--0.802132504110034-0.562038191119711	chr19	46524366	46525077	+	0	NA	intron (NM_001025391, intron 4 of 11)	intron (NM_001025391, intron 4 of 11)	-51417	NM_053100	93679	Mm.392177	NM_053100	ENSMUSG00000025034	Trim8	AA408830|BB006755|GERP|Rnf27	tripartite motif-containing 8	protein-coding
common_peak2-31444-8-5-0.420259917226415-1.10484139239135	chr8	104386745	104387041	+	0	NA	Intergenic	L1_Mus3|LINE|L1	922118	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
unique_peak2-39103-10-15--0.643584654991231-0.519648556297791	chr8	79097089	79097773	+	0	NA	Intergenic	L1Md_F2|LINE|L1	326641	NR_028579	100039211	Mm.367571	NR_028579	ENSMUSG00000074235	Gm10649	ENSMUSG00000074235	predicted gene 10649	ncRNA
common_peak2-22819-66-99--0.125372525348883-0.356750404116971	chr14	18238206	18239092	+	0	NA	Intergenic	Intergenic	-254825	NM_001113417	21834	Mm.32563	NM_009380	ENSMUSG00000021779	Thrb	Nr1a2|T3R[b]|T3Rbeta|Thrb1|Thrb2|c-erbAbeta	thyroid hormone receptor beta	protein-coding
common_peak2-27434-53-72--0.0488515464640891-0.302548520215158	chr3	89772827	89774265	+	0	NA	Intergenic	(TAA)n|Simple_repeat|Simple_repeat	-6292	NM_001081182	54667	Mm.30455	NM_001081182	ENSMUSG00000060671	Atp8b2	Id	ATPase, class I, type 8B, member 2	protein-coding
common_peak2-22354-11-8-0.338768582809301-1.14218153353838	chr13	24825667	24826082	+	0	NA	TTS (NM_001286100)	TTS (NM_001286100)	27932	NM_020567	57441	Mm.12239	NM_020567	ENSMUSG00000006715	Gmnn	AW546347|Gem	geminin	protein-coding
common_peak1-9820-35-59--0.475520337146015-0.848284310483207	chr12	70967823	70969175	+	0	NA	intron (NM_201519, intron 2 of 30)	ORR1D2|LTR|MaLR	23826	NR_038172	70934	Mm.440427	NR_038172		4931403G20Rik	-	RIKEN cDNA 4931403G20 gene	ncRNA
unique_peak1-3295-13-2-2.19350952991661-3.03832868024006	chr18	75390966	75391638	+	0	NA	intron (NM_027727, intron 15 of 16)	B3|SINE|B2	65669	NR_045394	100503117	Mm.250517	NR_045393		2010010A06Rik	5033420E22Rik	RIKEN cDNA 2010010A06 gene	ncRNA
common_peak2-24807-96-123-0.211854903968454-0.660059622367254	chr17	69416684	69418143	+	0	NA	Intergenic	Intergenic	-88737	NM_013813	13823	Mm.131135	NM_013813	ENSMUSG00000024044	Epb4.1l3	4.1B|DAL1P|Dal1|Epb41l3|NBL3	erythrocyte protein band 4.1-like 3	protein-coding
common_peak2-31858-12-10-0.189344366450341-0.386243247519795	chr9	50752353	50752794	+	0	NA	intron (NM_178710, intron 3 of 15)	RMER1B|Other|Other	64605	NM_178710	235344	Mm.104932	NM_178710	ENSMUSG00000037112	Sik2	G630080D20Rik|Snf1lk2	salt inducible kinase 2	protein-coding
unique_peak2-39651-6-6--0.241956811677302-0.947717972411649	chr9	106371951	106372248	+	0	NA	TTS (NM_145619)	TTS (NM_145619)	-3828	NM_001159652	436090	Mm.482905	NM_001159652	ENSMUSG00000091735	Gpr62	4933402E03Rik	G protein-coupled receptor 62	protein-coding
common_peak2-31199-15-25--0.688274967585436-0.73354163167379	chr8	60993231	60994038	+	0	NA	intron (NM_175032, intron 2 of 11)	intron (NM_175032, intron 2 of 11)	185959	NM_001177534	100271928	Mm.484123	NM_001177534		Gm15881	OTTMUSG00000027193	predicted gene 15881	protein-coding
unique_peak2-36015-6-18--1.68252940306328-1.66449268468235	chr19	40621786	40622052	+	0	NA	Intergenic	Intergenic	-33617	NM_009166	20411	Mm.210815	NM_009166		Sorbs1	2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296	sorbin and SH3 domain containing 1	protein-coding
unique_peak2-33696-7-4-0.477162735410827-1.09384600808989	chr11	106180154	106180588	+	0	NA	3' UTR (NM_133199, exon 24 of 24)	3' UTR (NM_133199, exon 24 of 24)	-4528	NM_008339	15985	Mm.2987	NM_008339	ENSMUSG00000040592	Cd79b	B29|Ig-beta|Igb|Igbeta	CD79B antigen	protein-coding
common_peak2-23205-39-55--0.19159367513845-0.376238101225462	chr15	98533247	98534415	+	0	NA	Intergenic	ID_B1|SINE|B4	-4827	NM_153518	105833	Mm.26205	NM_153518	ENSMUSG00000003354	Ccdc65	4933417K04Rik|AI428139|AU020178|NYD-SP28	coiled-coil domain containing 65	protein-coding
unique_peak1-1576-20-4-2.16614668970383-3.28004177908661	chr13	31569084	31570115	+	0	NA	Intergenic	Intergenic	-80440	NM_008239	15220	Mm.44235	NM_008239	ENSMUSG00000038415	Foxq1	HFH-1|Hfh1|Hfh1l|sa	forkhead box Q1	protein-coding
unique_peak1-4119-10-4-1.03448725012141-1.5150158574804	chr2	84637989	84638506	+	0	NA	promoter-TSS (NM_019949)	promoter-TSS (NM_019949)	-738	NM_019949	56791	Mm.38261	NM_019949	ENSMUSG00000027078	Ube2l6	2810489I21Rik|RIG-B|UBCH8|Ubce8|Ubcm8	ubiquitin-conjugating enzyme E2L 6	protein-coding
unique_peak2-38868-3-9--1.73591118484664-1.57096726280955	chr7	145283441	145283825	+	0	NA	Intergenic	RMER1C|Other|Other	305780	NM_183289	70571	Mm.334297	NM_183289	ENSMUSG00000091002	Tcerg1l	5730476P14Rik	transcription elongation regulator 1-like	protein-coding
common_peak1-18839-7-11--0.785871670422967-1.21681515183528	chr9	15238479	15238936	+	0	NA	Intergenic	ETnERV2-int|LTR|ERVK	-71232	NM_133214	170748	Mm.86572	NM_133214	ENSMUSG00000058173	Smco4	Fn5	single-pass membrane protein with coiled-coil domains 4	protein-coding
common_peak1-18009-24-25-0.0927701846266249-0.337923771396236	chr7	141172238	141173221	+	0	NA	intron (NM_007400, intron 6 of 22)	intron (NM_007400, intron 6 of 22)	-198261	NM_001286031	101437	Mm.199223	NM_133941	ENSMUSG00000030986	Dhx32	3110079L04Rik|4732469F02Rik|AA408140|Ddx32	DEAH (Asp-Glu-Ala-His) box polypeptide 32	protein-coding
common_peak2-29232-28-56--0.779930894343279-1.6064785466786	chr5	138619147	138619896	+	0	NA	TTS (NM_009315)	TTS (NM_009315)	6272	NM_021392	11781	Mm.113205	NM_021392	ENSMUSG00000019518	Ap4m1	4930443L05Rik|Ap4m4	adaptor-related protein complex AP-4, mu 1	protein-coding
unique_peak2-38580-5-9--1.02630843089322-1.21398586181642	chr7	67286947	67287416	+	0	NA	Intergenic	L1_Mus2|LINE|L1	-2076	NM_001082962	20646	Mm.274995	NM_013670	ENSMUSG00000000948	Snrpn	2410045I01Rik|HCERN3|Peg4|Pwcr1|SMN	small nuclear ribonucleoprotein N	protein-coding
common_peak1-14897-42-41-0.350011905088423-0.688538237251116	chr3	96263431	96264514	+	0	NA	Intergenic	U1|snRNA|snRNA	-7743	NM_001256180	329716	Mm.275223	NM_183223	ENSMUSG00000046317	BC107364	D730018G16	cDNA sequence BC107364	protein-coding
common_peak1-7647-28-22-0.529397163764449-0.781990829058356	chr1	72254524	72255275	+	0	NA	intron (NM_001005423, intron 1 of 4)	L1MB7|LINE|L1	3982	NM_001005423	381269	Mm.422636	NM_001005423	ENSMUSG00000039395	Mreg	Gm974|Wdt2|dsu	melanoregulin	protein-coding
unique_peak2-35312-1-9--2.94898510510411-2.31132995230379	chr17	14341605	14342056	+	0	NA	promoter-TSS (NM_172826)	promoter-TSS (NM_172826)	-992	NM_172826	240025	Mm.79993	NM_172826	ENSMUSG00000048826	Dact2	2900084M21Rik|A630024E20|Dpr2|Frd2|dapper2	dapper homolog 2, antagonist of beta-catenin (xenopus)	protein-coding
unique_peak2-34034-4-8--1.19338551529556-1.21878474469819	chr12	112587007	112587598	+	0	NA	intron (NM_183016, intron 1 of 36)	intron (NM_183016, intron 1 of 36)	28627	NM_183016	217866	Mm.27397	NM_183016	ENSMUSG00000021279	Cdc42bpb	MRCKb	CDC42 binding protein kinase beta	protein-coding
common_peak1-12076-27-22-0.467983994838223-0.705485015404196	chr17	24426391	24427345	+	0	NA	intron (NM_001031621, intron 18 of 29)	intron (NM_001031621, intron 18 of 29)	-38514	NM_007634	12449	Mm.77695	NM_007634	ENSMUSG00000072082	Ccnf	CycF|Fbxo1	cyclin F	protein-coding
common_peak2-20111-25-19-0.539921810457743-0.756750750680359	chr1	161250247	161251194	+	0	NA	intron (NM_011931, intron 15 of 19)	intron (NM_011931, intron 15 of 19)	-19718	NR_028518	100217414	Mm.450690	NR_028518		Scarna3a	MBI-114	small Cajal body-specific RNA 3A	ncRNA
unique_peak1-2497-7-3-0.799090830298189-1.23214870625617	chr16	11505808	11506333	+	0	NA	intron (NM_001290148, intron 6 of 13)	intron (NM_001290148, intron 6 of 13)	100329	NM_001290148	74478	Mm.325831	NM_028964	ENSMUSG00000071669	Snx29	4933437K13Rik|ENSMUSG00000079738|Gm11170|Gm1737|Gm930|Rundc2a	sorting nexin 29	protein-coding
unique_peak1-3090-9-1-2.18961340640422-2.31132995230379	chr18	24860377	24860974	+	0	NA	TTS (NM_026779)	TTS (NM_026779)	-6449	NM_001289654	225288	Mm.329322	NM_175276	ENSMUSG00000034295	Fhod3	A930009H06Rik|FHOS2|mKIAA1695	formin homology 2 domain containing 3	protein-coding
unique_peak1-6713-25-1-3.86184990534511-7.42783416306327	chr8	36188722	36189607	+	0	NA	Intergenic	RLTR10D|LTR|ERVK	-160420	NM_175091	21951	Mm.88364	NM_175091	ENSMUSG00000031529	Tnks	4930554K12Rik|AI662855|ARTD5|C86528|D130072O21Rik|TANK1|mTNKS1	tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase	protein-coding
common_peak2-30588-17-5-1.63333383748388-2.19184853030482	chr7	80787159	80787579	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	44080	NR_033604	244061	Mm.484605	NR_033604		Gm4971	EG244061	Smad nuclear interacting protein 1 pseudogene	pseudo
unique_peak1-7144-10-9-0.0344872501214071-1.05503135781948	chr9	57261215	57261895	+	0	NA	3' UTR (NM_176831, exon 7 of 7)	3' UTR (NM_176831, exon 7 of 7)	22678	NR_040729	73772	Mm.444684	NR_040729		4930430J02Rik	-	RIKEN cDNA 4930430J02 gene	ncRNA
unique_peak2-39774-6-10--0.894033508256995-1.21398586181642	chrX	7722403	7722863	+	0	NA	promoter-TSS (NR_033561)	promoter-TSS (NR_033561)	80	NR_033561	70226	Mm.391639	NR_033561	ENSMUSG00000055188	Rbm3os	2900002K06Rik	RNA binding motif protein 3, opposite strand	ncRNA
unique_peak2-39082-3-9--1.73591118484664-1.57096726280955	chr8	73276437	73276907	+	0	NA	Intergenic	Intergenic	-1906	NM_009001	19339	Mm.5083	NM_009001	ENSMUSG00000031840	Rab3a	-	RAB3A, member RAS oncogene family	protein-coding
common_peak2-26124-7-8--0.370834171144123-1.00793137938329	chr2	6349329	6349882	+	0	NA	intron (NM_181399, intron 12 of 13)	intron (NM_181399, intron 12 of 13)	75823	NM_181399	98910	Mm.40673	NM_181399	ENSMUSG00000039046	Usp6nl	AI316785|RNTRE|TRE2NL|mKIAA0019	USP6 N-terminal like	protein-coding
common_peak1-11369-37-61--0.428203238901056-0.759155512401768	chr15	94589065	94589993	+	0	NA	intron (NM_178789, intron 3 of 7)	intron (NM_178789, intron 3 of 7)	129913	NM_178789	320709	Mm.74873	NM_178789	ENSMUSG00000063296	Tmem117	B930062P21Rik	transmembrane protein 117	protein-coding
common_peak1-13113-34-23-0.79710602628011-1.52482195715361	chr19	8887848	8889469	+	0	NA	intron (NM_027412, intron 3 of 3)	intron (NM_027412, intron 3 of 3)	5126	NM_027412	70387	Mm.261082	NM_027412	ENSMUSG00000071660	Ttc9c	2210019E14Rik|6330408J23Rik	tetratricopeptide repeat domain 9C	protein-coding
common_peak2-21055-27-47--0.59341654982592-0.923258070389341	chr11	44469755	44471151	+	0	NA	intron (NM_001290710, intron 6 of 14)	AT_rich|Low_complexity|Low_complexity	38851	NM_001290710	13591	Mm.439662	NM_007897		Ebf1	Ebf|O/E-1|OE-1|Olf-1|Olf1	early B cell factor 1	protein-coding
unique_peak2-39122-5-10--1.16381195464315-1.33892459842472	chr8	83652782	83653187	+	0	NA	Intergenic	L1_Mus2|LINE|L1	-114179	NM_027554	74841	Mm.246018	NM_027554	ENSMUSG00000038250	Usp38	4631402N15Rik|4833420O05Rik|AA536967|AU044701|AW544820|mKIAA1891	ubiquitin specific peptidase 38	protein-coding
unique_peak1-4356-16-6-1.31090872021046-1.49151883326344	chr2	155751012	155751719	+	0	NA	intron (NR_024487, intron 1 of 9)	B3|SINE|B2	4681	NM_018888	56046	Mm.158827	NM_018888	ENSMUSG00000005882	Uqcc1	2310079L17Rik|2410003P15Rik|3110038N19Rik|Bfzb|Bfzp|Cbp3|Uqcc	ubiquinol-cytochrome c reductase complex assembly factor 1	protein-coding
common_peak1-15437-14-21--0.560215458279653-0.519193887192484	chr4	89310282	89310937	+	0	NA	Intergenic	Intergenic	-44280	NM_175647	242523	Mm.130167	NM_175647	ENSMUSG00000043753	Dmrta1	Dmrt4	doublesex and mab-3 related transcription factor like family A1	protein-coding
unique_peak2-37550-8-9--0.316705676939792-1.03275496310833	chr5	31605668	31606173	+	0	NA	intron (NM_144909, intron 8 of 18)	intron (NM_144909, intron 8 of 18)	5966	NM_144909	231103	Mm.100043	NM_144909	ENSMUSG00000059434	Gckr	GKRP	glucokinase regulatory protein	protein-coding
common_peak1-17793-11-15--0.491306415748387-0.435191258261915	chr7	98703082	98703661	+	0	NA	intron (NM_011807, intron 2 of 22)	intron (NM_011807, intron 2 of 22)	464075	NM_011807	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
common_peak2-28032-21-37--0.67843824817735-0.907273387067392	chr4	55350032	55350774	+	0	NA	Intergenic	Intergenic	-12511	NM_009011	19359	Mm.196846	NM_009011	ENSMUSG00000028426	Rad23b	0610007D13Rik|AV001138|HR23B|mHR23B|p58	RAD23b homolog (S. cerevisiae)	protein-coding
common_peak2-24988-42-117--1.14031372149466-5.46183323188769	chr18	10181231	10182334	+	0	NA	promoter-TSS (NM_009071)	promoter-TSS (NM_009071)	8	NM_009071	19877	Mm.6710	NM_009071	ENSMUSG00000024290	Rock1	1110055K06Rik|Rock-I	Rho-associated coiled-coil containing protein kinase 1	protein-coding
common_peak1-19097-21-14-0.662598669657717-0.879255460030357	chr9	71805391	71806457	+	0	NA	intron (NM_001253862, intron 5 of 19)	intron (NM_001253862, intron 5 of 19)	-62021	NM_001253863	21406	Mm.171615	NM_011544	ENSMUSG00000032228	Tcf12	A130037E08Rik|ALF1|HEB|HEBAlt|HTF-4|HTF4|ME1|REB|bHLHb20	transcription factor 12	protein-coding
common_peak2-31699-9-22--1.33394854965279-1.52222891542741	chr9	48479902	48480869	+	0	NA	intron (NM_001033324, intron 4 of 6)	B3|SINE|B2	-67203	NM_010924	18113	Mm.8362	NM_010924	ENSMUSG00000032271	Nnmt	-	nicotinamide N-methyltransferase	protein-coding
common_peak2-29422-21-14-0.662598669657717-0.879255460030357	chr6	5509254	5509784	+	0	NA	Intergenic	Intergenic	-63241	NM_013743	27273	Mm.235547	NM_013743	ENSMUSG00000019577	Pdk4	AV005916	pyruvate dehydrogenase kinase, isoenzyme 4	protein-coding
common_peak2-30906-23-37--0.526160008934505-0.720235944639228	chr7	143548160	143549192	+	0	NA	Intergenic	Intergenic	-7578	NR_040459	330664	Mm.127762	NR_040459		C230079O03Rik	C230079O03	RIKEN cDNA C230079O03 gene	ncRNA
common_peak2-29065-25-28-0.00386891021753399-0.304839791830758	chr5	117286522	117287692	+	0	NA	Intergenic	MTD|LTR|MaLR	-245281	NM_026886	68955	Mm.146779	NM_026886	ENSMUSG00000063919	Srrm4	1500001A10Rik|B230202K19Rik|bv|mKIAA1853|nSR100	serine/arginine repetitive matrix 4	protein-coding
common_peak2-22547-7-7--0.200909169701811-0.97990265578305	chr13	59454377	59454802	+	0	NA	Intergenic	Intergenic	191223	NM_001284221	67269	Mm.153008	NM_023328	ENSMUSG00000021557	Agtpbp1	1700020N17Rik|2310001G17Rik|2900054O13Rik|4930445M19Rik|5730402G09Rik|CCP1|Nna1|nmf243|pcd	ATP/GTP binding protein 1	protein-coding
unique_peak2-35047-0-4--3.16205902536157-1.10720996964787	chr16	4669975	4670391	+	0	NA	intron (NM_030205, intron 4 of 27)	intron (NM_030205, intron 4 of 27)	9537	NM_030205	78885	Mm.325512	NM_030205	ENSMUSG00000039637	Coro7	0610011B16Rik|AW048373|AW556392	coronin 7	protein-coding
common_peak2-30130-52-86--0.334683505583029-0.706720175003303	chr6	137734730	137736016	+	0	NA	intron (NM_172733, intron 5 of 8)	intron (NM_172733, intron 5 of 8)	32275	NM_172733	232449	Mm.29181	NM_172733	ENSMUSG00000030225	Dera	2010002D22Rik|2500002K03Rik|DEOC	2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	protein-coding
common_peak2-29816-10-8-0.186490343566457-1.078512453669	chr6	91388793	91389249	+	0	NA	intron (NR_045980, intron 1 of 2)	intron (NR_045980, intron 1 of 2)	1827	NR_045980	75787	Mm.30842	NR_045980	ENSMUSG00000097693	4930471M09Rik	4930427C17Rik	RIKEN cDNA 4930471M09 gene	ncRNA
common_peak2-24929-25-30--0.0923464050417691-0.304710633611958	chr17	87738511	87739353	+	0	NA	intron (NM_028639, intron 11 of 19)	intron (NM_028639, intron 11 of 19)	56706	NM_028639	225049	Mm.77396	NM_028639	ENSMUSG00000036918	Ttc7	1110035E02Rik|1700007L07Rik|Ttc7a|fsn|hea	tetratricopeptide repeat domain 7	protein-coding
unique_peak2-37093-6-5--0.0195643903408542-0.947717972411649	chr3	152556515	152556943	+	0	NA	intron (NM_012028, intron 2 of 4)	L1MB8|LINE|L1	88442	NM_012028	26938	Mm.40915	NM_012028		St6galnac5	AI851940|Siat7e	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	protein-coding
common_peak1-10574-26-12-1.22745937401737-2.03163221100073	chr14	25708565	25709778	+	0	NA	Intergenic	Intergenic	253556	NR_045718	75862	Mm.109191	NR_045718		4930572O13Rik	-	RIKEN cDNA 4930572O13 gene	ncRNA
unique_peak2-38264-6-4-0.24347001549294-0.989110657569874	chr6	125477094	125477516	+	0	NA	Intergenic	Intergenic	-25661	NM_011708	22371	Mm.22339	NM_011708	ENSMUSG00000001930	Vwf	6820430P06Rik|AI551257|B130011O06Rik|C630030D09|F8VWF|VWD	Von Willebrand factor homolog	protein-coding
unique_peak1-2846-14-5-1.31425365963649-1.4372489031793	chr17	29355668	29356322	+	0	NA	intron (NM_153166, intron 3 of 20)	IAPLTR2_Mm|LTR|ERVK	18740	NM_153166	240058	Mm.39905	NM_153166	ENSMUSG00000024008	Cpne5	A830083G22Rik	copine V	protein-coding
common_peak1-18250-12-8-0.478850983645327-0.562038191119709	chr8	33662454	33662998	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	397772	NM_001177589	100042715	Mm.291093	NM_001177589		Gm3985	-	predicted gene 3985	protein-coding
common_peak2-23202-47-72--0.25498313411347-0.498810849059171	chr15	95370100	95371600	+	0	NA	Intergenic	Charlie10|DNA|MER1_type	-12167	NM_001289653	54003	Mm.3959	NM_016743	ENSMUSG00000022454	Nell2	A330108N19Rik|R75516|mel91	NEL-like 2	protein-coding
common_peak2-27231-16-8-0.948338640825749-1.02063122982878	chr3	51670194	51670644	+	0	NA	intron (NM_001004176, intron 1 of 4)	AT_rich|Low_complexity|Low_complexity	205304	NM_174995	211666	Mm.24679	NM_174995	ENSMUSG00000074604	Mgst2	GST2|MGST-II	microsomal glutathione S-transferase 2	protein-coding
common_peak1-14520-7-12--0.901348887842903-1.31827279259406	chr3	27691764	27692258	+	0	NA	Intergenic	Lx8|LINE|L1	-82650	NM_173182	72007	Mm.38832	NM_173182	ENSMUSG00000039286	Fndc3b	1600019O04Rik|AW550168|Fad104|mKIAA4164	fibronectin type III domain containing 3B	protein-coding
unique_peak2-36323-8-15--0.994777582052429-0.771068449301683	chr2	84670572	84671179	+	0	NA	TTS (NM_013899)	TTS (NM_013899)	3697	NM_013899	30059	Mm.21826	NM_013899	ENSMUSG00000027076	Timm10	Tim13|Timm13a	translocase of inner mitochondrial membrane 10	protein-coding
common_peak1-14477-15-21--0.447266868081641-0.448200956659578	chr3	131530237	131530928	+	0	NA	Intergenic	Intergenic	-217674	NM_020265	56811	Mm.103593	NM_020265	ENSMUSG00000028031	Dkk2	-	dickkopf homolog 2 (Xenopus laevis)	protein-coding
common_peak1-17923-10-12--0.344024373132323-0.340565874754526	chr7	126759619	126760130	+	0	NA	Intergenic	Intergenic	-1468	NM_054094	117147	Mm.427560	NM_054094	ENSMUSG00000033533	Acsm1	Acas3|Bucs1|Macs	acyl-CoA synthetase medium-chain family member 1	protein-coding
common_peak2-20226-43-76--0.484223355171198-1.03520063226399	chr1	180941185	180943057	+	0	NA	intron (NM_027188, intron 10 of 11)	intron (NM_027188, intron 10 of 11)	482865	NM_001161665	269152	Mm.129727	NM_177724	ENSMUSG00000026494	Kif26b	4832420M10|BC056349|D230039L06Rik	kinesin family member 26B	protein-coding
unique_peak2-39545-1-8--2.79698201165906-2.05605744720049	chr9	69431929	69432412	+	0	NA	Intergenic	L1M3|LINE|L1	127419	NR_037296	100526560		NR_037296	miRBase:MI0014106	Mir3109	mmu-mir-3109	microRNA 3109	ncRNA
common_peak2-29396-16-19--0.203664452619301-0.325169893479371	chr6	86523774	86524682	+	0	NA	Intergenic	RSINE1|SINE|B4	46833	NR_037961	72012	Mm.349174	NR_037960	ENSMUSG00000097048	1600020E01Rik	-	RIKEN cDNA 1600020E01 gene	ncRNA
unique_peak2-33080-4-16--2.11092335510359-1.97518968347063	chr10	80071385	80071860	+	0	NA	promoter-TSS (NR_105877)	promoter-TSS (NR_105877)	-383	NR_105877	102465550		NR_105877		Mir6912	mmu-mir-6912	microRNA mir-6912	ncRNA
unique_peak2-37259-3-7--1.41398308995928-1.23214870625617	chr4	106839021	106839502	+	0	NA	intron (NM_025617, intron 2 of 4)	B1_Mus2|SINE|Alu	11710	NM_025617	66526	Mm.246956	NM_025617	ENSMUSG00000028619	Tceanc2	2210010B22Rik|2210012G02Rik|6330404A07Rik|AU015593|Tdeanc2	transcription elongation factor A (SII) N-terminal and central domain containing 2	protein-coding
common_peak1-17095-19-13-0.595332404604082-0.713635438203849	chr6	113036404	113037143	+	0	NA	intron (NM_028385, intron 1 of 21)	intron (NM_028385, intron 1 of 21)	9140	NM_028385	72895	Mm.367159	NM_028385	ENSMUSG00000034269	Setd5	2900045N06Rik|C330007C20|C85544|mKIAA1757	SET domain containing 5	protein-coding
common_peak2-26454-21-18-0.32156175182265-0.48779450977742	chr2	72475836	72476363	+	0	NA	Intergenic	Intergenic	-65468	NR_040503	74541	Mm.410774	NR_040503	ENSMUSG00000085252	8430437L04Rik	-	RIKEN cDNA 8430437L04 gene	ncRNA
common_peak1-13870-34-30-0.427872216614391-0.737357778720995	chr2	71055388	71056648	+	0	NA	intron (NM_001198872, intron 2 of 18)	intron (NM_001198872, intron 2 of 18)	6015	NM_010064	13427	Mm.249479	NM_010064	ENSMUSG00000027012	Dync1i2	3110079H08Rik|AW554389|Dncic2	dynein cytoplasmic 1 intermediate chain 2	protein-coding
unique_peak1-4064-13-2-2.19350952991661-3.03832868024006	chr2	62725256	62725777	+	0	NA	intron (NM_133207, intron 2 of 15)	intron (NM_133207, intron 2 of 15)	223132	NM_145523	227960	Mm.219877	NM_145523	ENSMUSG00000026893	Gca	5133401E04Rik|AI573844	grancalcin	protein-coding
common_peak1-17435-16-31--0.881736357731938-1.20073456579999	chr7	16119549	16120310	+	0	NA	Intergenic	Lx2B|LINE|L1	-12677	NM_027802	71468	Mm.415195	NM_027802	ENSMUSG00000054310	Obox1	7420700M11Rik|AU015708|AU024152	oocyte specific homeobox 1	protein-coding
common_peak1-8401-23-20-0.32945008173032-0.471456499375596	chr10	68278655	68279426	+	0	NA	Intergenic	MTD|LTR|MaLR	92546	NM_177794	327766	Mm.2479	NM_177794	ENSMUSG00000060044	Tmem26	3230401A06|AI195372	transmembrane protein 26	protein-coding
common_peak2-23347-23-22-0.198205548452068-0.373496418836697	chr15	40363466	40364367	+	0	NA	Intergenic	Intergenic	-5093	NR_046185	432945	Mm.321981	NR_046185	ENSMUSG00000056332	Gm16294	EG432945|OTTMUSG00000033304	predicted gene 16294	ncRNA
common_peak2-25735-12-13--0.158578936969966-0.301029995663979	chr19	24289524	24289959	+	0	NA	intron (NM_011597, intron 1 of 22)	B1_Mur2|SINE|Alu	9775	NM_011597	21873	Mm.104744	NM_011597	ENSMUSG00000024812	Tjp2	ZO-2	tight junction protein 2	protein-coding
unique_peak2-35662-4-9--1.34538860874061-1.36011389749466	chr18	6239378	6239941	+	0	NA	intron (NM_008448, intron 1 of 25)	B1_Mus1|SINE|Alu	1863	NM_008448	16573	Mm.223744	NM_008448	ENSMUSG00000006740	Kif5b	AL022807|Khc|Khcs|Kns1|Ukhc	kinesin family member 5B	protein-coding
common_peak2-20579-13-15--0.221527969362231-0.308519316180257	chr10	77515265	77515767	+	0	NA	exon (NM_001284197, exon 6 of 12)	exon (NM_001284197, exon 6 of 12)	-2564	NM_001284198	54427	Mm.13433	NM_019448	ENSMUSG00000000730	Dnmt3l	D6Ertd14e|ecat7	DNA (cytosine-5-)-methyltransferase 3-like	protein-coding
common_peak2-31239-24-21-0.333778284130419-0.518921928796332	chr8	70302283	70303179	+	0	NA	intron (NM_177698, intron 9 of 14)	L1Md_T|LINE|L1	39463	NM_027626	234353	Mm.32525	NM_027626	ENSMUSG00000030465	Psd3	4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D	pleckstrin and Sec7 domain containing 3	protein-coding
unique_peak2-37983-2-14--2.82434485187184-3.03832868024006	chr6	10186316	10186541	+	0	NA	Intergenic	Lx3_Mus|LINE|L1	737950	NR_033776	57866	Mm.4397	NR_033776		AA545190	-	EST AA545190	ncRNA
common_peak1-14003-16-16-0.0308008010177225-0.307611222530525	chr2	104849450	104850146	+	0	NA	intron (NM_145380, intron 5 of 10)	intron (NM_145380, intron 5 of 10)	7386	NM_145380	98221	Mm.379278	NM_145380	ENSMUSG00000027170	Eif3m	Ga17|Pcid1|Tango7	eukaryotic translation initiation factor 3, subunit M	protein-coding
common_peak1-14330-38-31-0.57145265929853-1.10165134406427	chr2	164432184	164433831	+	0	NA	intron (NM_001276432, intron 3 of 6)	MER5A|DNA|MER1_type	5879	NM_001276432	277343	Mm.383292	NM_001080550	ENSMUSG00000070533	Wfdc8	Gm706	WAP four-disulfide core domain 8	protein-coding
common_peak2-32281-83-115-0.0562416299785546-0.334157720374157	chrX	18161742	18164125	+	0	NA	Intergenic	L1Md_T|LINE|L1	-124533	NM_175228	75905	Mm.159617	NM_175228	ENSMUSG00000037358	4930578C19Rik	-	RIKEN cDNA 4930578C19 gene	protein-coding
unique_peak2-35997-7-10--0.660340788339108-1.12966497611638	chr19	36207587	36208234	+	0	NA	Intergenic	Intergenic	-13576	NM_013468	107765	Mm.10279	NM_013468	ENSMUSG00000024803	Ankrd1	Alrp|CARP|Crap|MARP1	ankyrin repeat domain 1 (cardiac muscle)	protein-coding
unique_peak1-2928-13-1-2.77847203063777-3.64038867156802	chr17	50685223	50685701	+	0	NA	intron (NM_013880, intron 1 of 5)	L1M5|LINE|L1	36590	NM_013880	224860	Mm.217362	NM_013880	ENSMUSG00000038910	Plcl2	PLC-L2|PRIP-2|Plce2|mKIAA1092	phospholipase C-like 2	protein-coding
unique_peak2-39880-5-10--1.16381195464315-1.33892459842472	chrX	74312876	74313494	+	0	NA	Intergenic	Intergenic	-443381	NM_020601	21372	Mm.258476	NM_020601	ENSMUSG00000025246	Tbl1x	5330429M20|Tbl1	transducin (beta)-like 1 X-linked	protein-coding
common_peak1-7549-28-37--0.194968393622123-0.350690697593776	chr1	37429920	37430859	+	0	NA	intron (NM_001290797, intron 13 of 25)	intron (NM_001290797, intron 13 of 25)	4327	NM_001290799	269180	Mm.5294	NM_030266	ENSMUSG00000026113	Inpp4a	107kDa|9630012D15|D130048C09Rik|R74740	inositol polyphosphate-4-phosphatase, type I	protein-coding
common_peak1-14654-29-32-0.0678959612566574-0.330208782692001	chr3	57470519	57471620	+	0	NA	TTS (NM_001033349)	TTS (NM_001033349)	-15463	NM_175095	52245	Mm.21901	NM_175095		Commd2	1190017G07Rik|AI047739|D3Ertd176e|HSPC042	COMM domain containing 2	protein-coding
common_peak2-22847-67-75-0.29648396933941-0.720618907161341	chr14	21830762	21832083	+	0	NA	intron (NM_009502, intron 13 of 20)	intron (NM_009502, intron 13 of 20)	40242	NM_018829	55946	Mm.376269	NM_018829		Ap3m1	1200013D09Rik|C78982|R75378	adaptor-related protein complex 3, mu 1 subunit	protein-coding
unique_peak1-5438-7-8--0.370834171144123-1.00793137938329	chr5	115542342	115542797	+	0	NA	intron (NM_029012, intron 8 of 10)	URR1B|DNA|MER1_type	15402	NM_001271591	100502825	Mm.361657	NM_001271590		Gm13826	OTTMUSG00000014624	predicted gene 13826	protein-coding
unique_peak2-35531-6-27--2.2419568116773-3.43978897119959	chr17	53581865	53583036	+	0	NA	intron (NM_172497, intron 5 of 12)	intron (NM_172497, intron 5 of 12)	20196	NM_172497	211482	Mm.60887	NM_172497	ENSMUSG00000023931	Efhb	4921525D22Rik	EF hand domain family, member B	protein-coding
common_peak1-19213-11-14--0.398197011356905-0.379391706698377	chr9	105642883	105643554	+	0	NA	intron (NM_001102607, intron 20 of 36)	intron (NM_001102607, intron 20 of 36)	68760	NM_172927	245026	Mm.482507	NM_172927	ENSMUSG00000043719	Col6a6	E330019B14|E330026B02Rik	collagen, type VI, alpha 6	protein-coding
unique_peak1-3840-14-5-1.31425365963649-1.4372489031793	chr2	4477441	4478070	+	0	NA	intron (NM_172475, intron 11 of 22)	intron (NM_172475, intron 11 of 22)	-3045	NM_001177844	209630	Mm.37932	NM_172475	ENSMUSG00000026657	Frmd4a	2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|OTTMUSG00000010806|mKIAA1294	FERM domain containing 4A	protein-coding
unique_peak1-6320-12-4-1.32684789020028-2.04196296489515	chr7	45570080	45570555	+	0	NA	Intergenic	Intergenic	949587	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak2-24487-26-42--0.498365662543636-0.737357778720989	chr17	25013482	25014561	+	0	NA	Intergenic	Intergenic	-1694	NM_008340	16005	Mm.3135	NM_008340	ENSMUSG00000046070	Igfals	ALS|Albs|mKIAA4111	insulin-like growth factor binding protein, acid labile subunit	protein-coding
unique_peak1-5008-9-5-0.604650905683064-1.21398586181642	chr4	120951842	120952375	+	0	NA	Intergenic	L1Md_F2|LINE|L1	45414	NM_001033791	545677	Mm.372731	NM_001033791	ENSMUSG00000073764	Gm12888	OTTMUSG00000008911	predicted gene 12888	protein-coding
common_peak1-16466-64-74-0.236627711212723-0.564079346629873	chr5	136986703	136987899	+	0	NA	intron (NM_001291238, intron 1 of 22)	intron (NM_001291238, intron 1 of 22)	54550	NM_001291239	13047	Mm.320317	NM_009986	ENSMUSG00000029705	Cux1	CDP|Cutl1|Cux|Cux-1	cut-like homeobox 1	protein-coding
common_peak1-10758-8-5-0.420259917226415-1.10484139239135	chr14	70160424	70160899	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-6618	NM_020275	21933	Mm.193430	NM_020275	ENSMUSG00000022074	Tnfrsf10b	DR5|KILLER|Ly98|MK|TRAILR2|TRICK2A|TRICK2B|TRICKB	tumor necrosis factor receptor superfamily, member 10b	protein-coding
unique_peak2-35234-8-9--0.316705676939792-1.03275496310833	chr16	92684584	92685214	+	0	NA	intron (NM_001111022, intron 4 of 6)	intron (NM_001111022, intron 4 of 6)	12675	NM_001111023	12394	Mm.4081	NM_009821	ENSMUSG00000022952	Runx1	AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b	runt related transcription factor 1	protein-coding
common_peak2-20932-18-6-1.50556422917075-2.02801025126771	chr11	7239339	7239814	+	0	NA	Intergenic	L1_Rod|LINE|L1	-125650	NM_008343	16009	Mm.29254	NM_008343	ENSMUSG00000020427	Igfbp3	AI649005|IGFBP-3|IGgfbp3	insulin-like growth factor binding protein 3	protein-coding
unique_peak2-38208-4-10--1.48289213249054-1.5150158574804	chr6	113237818	113238473	+	0	NA	intron (NM_170673, intron 6 of 19)	B1F|SINE|Alu	5844	NM_170673	211232	Mm.65597	NM_170673	ENSMUSG00000030270	Cpne9	A730016F12Rik|mKIAA4217	copine family member IX	protein-coding
common_peak1-16167-25-35--0.308075096097206-0.423354874519378	chr5	88564933	88566107	+	0	NA	Intergenic	Intergenic	49939	NM_001252680	20600	Mm.1397	NM_021289	ENSMUSG00000029281	Smr2	MSG2|Vcs2	submaxillary gland androgen regulated protein 2	protein-coding
common_peak1-12828-30-17-0.999750408049561-1.81352036806616	chr18	69415055	69416351	+	0	NA	Intergenic	L1M3|LINE|L1	-88443	NM_013685	21413	Mm.4269	NM_013685	ENSMUSG00000053477	Tcf4	5730422P05Rik|ASP-I2|E2-2|E2.2|ITF-2|ITF-2b|ITF2|ME2|MITF-2A|MITF-2B|SEF-2|SEF2|SEF2-1|TFE|Tcf-4|bHLHb19	transcription factor 4	protein-coding
unique_peak2-33494-3-5--0.998945590680433-0.96108193396963	chr11	72131793	72132179	+	0	NA	exon (NM_001099688, exon 3 of 4)	exon (NM_001099688, exon 3 of 4)	4040	NM_001099688	628100	Mm.390365	NM_001099688	ENSMUSG00000070388	Fbxo39	1700010H23Rik	F-box protein 39	protein-coding
unique_peak2-38100-6-8--0.60452689106201-1.03789460276074	chr6	66983374	66983909	+	0	NA	Intergenic	Intergenic	-2952	NR_040278	320172	Mm.449039	NR_040278	ENSMUSG00000087231	E230016M11Rik	-	RIKEN cDNA E230016M11 gene	ncRNA
common_peak1-11798-18-26--0.441968350935117-0.471456499375593	chr16	56037353	56038100	+	0	NA	5' UTR (NM_029092, exon 1 of 2)	5' UTR (NM_029092, exon 1 of 2)	161	NM_029092	52575	Mm.288742	NM_029092		Trmt10c	1300018J16Rik|D16Ertd454e|Rg9mtd1|Rnmtd1	tRNA methyltransferase 10C	protein-coding
unique_peak1-1968-9-2-1.60465090568306-1.87199725847353	chr14	118656562	118657123	+	0	NA	Intergenic	RLTR21|LTR|ERVK	-1014	NR_105749	102465149		NR_105749	miRBase:MI0021588	Mir6241	mmu-mir-6241	microRNA mir-6241	ncRNA
common_peak1-8602-13-30--1.17572427974911-1.59386218057211	chr10	111619131	111619775	+	0	NA	intron (NM_178278, intron 5 of 16)	intron (NM_178278, intron 5 of 16)	16721	NM_178278	353025	Mm.194428	NM_178278	ENSMUSG00000035694	Caps2	D630005B03Rik	calcyphosphine 2	protein-coding
common_peak2-23120-22-32--0.397110014271049-0.488172498216822	chr14	99045388	99046136	+	0	NA	Intergenic	Intergenic	399593	NM_175245	76789	Mm.38912	NM_175245	ENSMUSG00000033186	Mzt1	2410129H14Rik|AI120158|Mozart1	mitotic spindle organizing protein 1	protein-coding
unique_peak1-2990-15-7-1.01216475055566-1.08658567012551	chr17	79821045	79821978	+	0	NA	Intergenic	Intergenic	55714	NR_033463	74622	Mm.311921	NR_033463		4930429F11Rik	-	RIKEN cDNA 4930429F11 gene	ncRNA
common_peak1-16296-31-33-0.137775829562784-0.350690697593776	chr5	113735086	113736374	+	0	NA	intron (NM_172718, intron 2 of 24)	MER20|DNA|MER1_type	4076	NM_001254731	52850	Mm.200203	NM_172718	ENSMUSG00000042216	Sgsm1	2410098H20Rik|AA408781|D5Bwg1524e|E130107M15|NuIP|Rutbc2	small G protein signaling modulator 1	protein-coding
common_peak1-16512-25-28-0.00386891021753399-0.304839791830758	chr5	140383425	140384524	+	0	NA	promoter-TSS (NM_175522)	promoter-TSS (NM_175522)	77	NM_175522	243312	Mm.237102	NM_175522	ENSMUSG00000048988	Elfn1	A930017N06Rik|AI197272|Ppp1r28	leucine rich repeat and fibronectin type III, extracellular 1	protein-coding
common_peak2-29119-18-29--0.593971444380167-0.662033714151235	chr5	123748839	123749400	+	0	NA	Intergenic	Intergenic	-45338	NM_029850	77045	Mm.151960	NM_029850	ENSMUSG00000029438	Bcl7a	4432415N06Rik|AI448316	B cell CLL/lymphoma 7A	protein-coding
common_peak1-12555-137-223--0.0243202225018413-0.305441598613121	chr18	7868215	7870340	+	0	NA	promoter-TSS (NM_001146298)	promoter-TSS (NM_001146298)	82	NM_153085	225131	Mm.204524	NM_153085	ENSMUSG00000024283	Wac	1110067P07Rik|A230035H12Rik|AI256735|AI256776|Wwp4	WW domain containing adaptor with coiled-coil	protein-coding
unique_peak2-33767-7-10--0.660340788339108-1.12966497611638	chr11	118211696	118212270	+	0	NA	intron (NM_011594, intron 1 of 4)	intron (NM_011594, intron 1 of 4)	4742	NM_011594	21858	Mm.206505	NM_011594	ENSMUSG00000017466	Timp2	D11Bwg1104e|Timp-2	tissue inhibitor of metalloproteinase 2	protein-coding
common_peak1-12794-39-52--0.112159207644045-0.320382596085891	chr18	64642700	64643930	+	0	NA	intron (NM_007998, intron 1 of 10)	intron (NM_007998, intron 1 of 10)	5405	NM_007998	14151	Mm.1070	NM_007998	ENSMUSG00000024588	Fech	AI894116|Fcl|fch	ferrochelatase	protein-coding
common_peak2-26487-21-17-0.399564263823923-0.561823156887258	chr2	80638399	80639085	+	0	NA	Intergenic	Intergenic	159321	NM_001190179	69482	Mm.29200	NM_027091		Nup35	2310006I24Rik|35kDa|5330402E05Rik|MP44|NO44	nucleoporin 35	protein-coding
unique_peak2-33026-3-15--2.41398308995928-2.80787975886178	chr10	68276536	68277304	+	0	NA	Intergenic	RMER21B|LTR|ERV1	90426	NM_177794	327766	Mm.2479	NM_177794	ENSMUSG00000060044	Tmem26	3230401A06|AI195372	transmembrane protein 26	protein-coding
common_peak2-25191-7-8--0.370834171144123-1.00793137938329	chr18	57819201	57819685	+	0	NA	intron (NM_029290, intron 5 of 6)	intron (NM_029290, intron 5 of 6)	-21204	NR_045360	70157	Mm.490532	NR_045360		2210409D07Rik	-	RIKEN cDNA 2210409D07 gene	ncRNA
common_peak1-13845-10-9-0.0344872501214071-1.05503135781948	chr2	60809664	60810267	+	0	NA	intron (NR_045335, intron 1 of 3)	intron (NR_045335, intron 1 of 3)	3243	NR_045335	100038493	Mm.388076	NR_045335	ENSMUSG00000075325	Gm13582	ENSMUSG00000075325|OTTMUSG00000012844	predicted gene 13582	ncRNA
common_peak1-14418-21-52--1.15843118929696-2.59472032287453	chr2	180171577	180172089	+	0	NA	Intergenic	Intergenic	-23850	NM_148933	108115	Mm.133687	NM_148933	ENSMUSG00000038963	Slco4a1	OATP-E|Slc21a12	solute carrier organic anion transporter family, member 4a1	protein-coding
common_peak2-20140-8-12--0.695217300193522-0.475924844171029	chr1	167269671	167270091	+	0	NA	intron (NM_028759, intron 15 of 18)	intron (NM_028759, intron 15 of 18)	43984	NM_001081126	240888	Mm.329929	NM_001081126		Gpr161	Gm208|Gm208Gpr|vl	G protein-coupled receptor 161	protein-coding
common_peak2-27848-26-34--0.201383924786504-0.35535220421655	chr3	152346380	152347071	+	0	NA	Intergenic	(TTC)n|Simple_repeat|Simple_repeat	-15621	NM_001081277	229949	Mm.207057	NM_001081277	ENSMUSG00000039058	Ak5	-	adenylate kinase 5	protein-coding
unique_peak1-2067-11-3-1.50869358425161-1.95434855131066	chr15	34253995	34254526	+	0	NA	intron (NM_016762, intron 2 of 18)	intron (NM_016762, intron 2 of 18)	17824	NM_016762	17181	Mm.396856	NM_016762	ENSMUSG00000022324	Matn2	Crtm2|matrilin-2	matrilin 2	protein-coding
unique_peak2-36953-4-8--1.19338551529556-1.21878474469819	chr3	108259337	108259782	+	0	NA	Intergenic	Intergenic	-11382	NM_001204979	20226	Mm.28688	NM_011319	ENSMUSG00000068739	Sars	Sars1|Strs|serRS	seryl-aminoacyl-tRNA synthetase	protein-coding
common_peak2-24199-32-39--0.0428360756677026-0.301029995663967	chr16	62786028	62787313	+	0	NA	promoter-TSS (NM_178925)	promoter-TSS (NM_178925)	-128	NM_178925	106338	Mm.26321	NM_178925		Nsun3	6720484A09Rik|AU022521	NOL1/NOP2/Sun domain family member 3	protein-coding
common_peak2-26870-57-74-0.0372143495830484-0.313973398029927	chr2	156111183	156112247	+	0	NA	intron (NM_172674, intron 9 of 17)	B3|SINE|B2	-26494	NM_027585	70873	Mm.475234	NM_027585	ENSMUSG00000038085	Cnbd2	4921517L17Rik|5430421B09Rik|Cris	cyclic nucleotide binding domain containing 2	protein-coding
common_peak2-27817-44-104--0.892352683097587-3.32422731684229	chr3	145118299	145119559	+	0	NA	intron (NM_027770, intron 33 of 59)	intron (NM_027770, intron 33 of 59)	-120243	NM_001081094	229937	Mm.24586	NM_001081094	ENSMUSG00000074182	Znhit6	2410019A14Rik	zinc finger, HIT type 6	protein-coding
common_peak2-22569-12-28--1.20920501003993-1.52081014994907	chr13	64152069	64153097	+	0	NA	Intergenic	Intergenic	37926	NM_008291	15487	Mm.5109	NM_008291	ENSMUSG00000033122	Hsd17b3	-	hydroxysteroid (17-beta) dehydrogenase 3	protein-coding
unique_peak2-36360-4-9--1.34538860874061-1.36011389749466	chr2	102948733	102949314	+	0	NA	Intergenic	Intergenic	35191	NM_019735	56369	Mm.24772	NM_019735	ENSMUSG00000010911	Apip	APIP2|CGI-29|Mmrp19	APAF1 interacting protein	protein-coding
common_peak1-16429-57-56-0.433143025914188-1.0240665209794	chr5	134183569	134184599	+	0	NA	Intergenic	B4|SINE|B4	-391534	NM_030719	80909	Mm.45218	NM_030719		Gatsl2	7530428J21Rik|AW742413|Gats|Gatsl1	GATS protein-like 2	protein-coding
unique_peak2-36208-6-22--1.95816384567671-2.41165147706372	chr2	32901985	32903016	+	0	NA	intron (NM_178888, intron 5 of 28)	ORR1E|LTR|MaLR	40224	NM_178888	99326	Mm.41290	NM_178888	ENSMUSG00000038860	Garnl3	AW120551	GTPase activating RANGAP domain-like 3	protein-coding
common_peak1-10463-10-18--0.891512168434816-0.804350088532826	chr13	109822206	109822653	+	0	NA	intron (NM_011056, intron 2 of 16)	ID4|SINE|ID	-292509	NR_030644	100124489		NR_030644		Mir582	Mirn582|mmu-mir-582	microRNA 582	ncRNA
common_peak2-21018-48-75--0.277000362208771-0.527904843875901	chr11	30771315	30773042	+	0	NA	intron (NM_134013, intron 43 of 46)	MTB|LTR|MaLR	-13180	NM_175490	237716	Mm.338361	NM_175490	ENSMUSG00000043999	Gpr75	-	G protein-coupled receptor 75	protein-coding
common_peak2-21675-23-26--0.0331199976543877-0.301029995663988	chr11	103381735	103382775	+	0	NA	Intergenic	Intergenic	93798	NM_001033434	380730	Mm.380214	NM_001033434	ENSMUSG00000034239	Gm884	LRRC37	predicted gene 884	protein-coding
unique_peak1-2626-9-3-1.18961340640422-1.57096726280955	chr16	39135179	39135618	+	0	NA	Intergenic	Intergenic	232940	NM_170599	207683	Mm.245564	NM_170599	ENSMUSG00000022790	Igsf11	1700025L02Rik|BT-IgSF|Igsf13	immunoglobulin superfamily, member 11	protein-coding
unique_peak2-39383-5-11--1.28934283672701-1.477227296591	chr9	21424940	21425523	+	0	NA	intron (NM_011417, intron 1 of 33)	intron (NM_011417, intron 1 of 33)	4618	NM_001174078	20586	Mm.286593	NM_011417	ENSMUSG00000032187	Smarca4	Brg1|HP1-BP72|SNF2beta|SW1/SNF|b2b508.1Clo|b2b692Clo	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	protein-coding
unique_peak2-36428-7-20--1.59322659248057-1.71830443967823	chr2	129198719	129199282	+	0	NA	intron (NR_015474, intron 2 of 2)	intron (NR_015474, intron 2 of 2)	-2144	NM_008361	16176	Mm.222830	NM_008361	ENSMUSG00000027398	Il1b	IL-1beta|Il-1b	interleukin 1 beta	protein-coding
common_peak1-10881-153-168-0.574138869838563-3.97382181431204	chr15	77969754	77971778	+	0	NA	Intergenic	Intergenic	-21056	NM_007583	12300	Mm.277338	NM_007583		Cacng2	AW060990|B230105C07Rik|B930041E13Rik|stargazer|stargazin|stg|wag|waggler	calcium channel, voltage-dependent, gamma subunit 2	protein-coding
unique_peak2-38628-5-11--1.28934283672701-1.477227296591	chr7	81182881	81183516	+	0	NA	Intergenic	Intergenic	-24630	NM_009181	20450	Mm.4954	NM_009181	ENSMUSG00000025789	St8sia2	AI323367|ST8SiaII|STX|Siat8b	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2	protein-coding
common_peak1-11399-26-52--0.800021362404737-1.59856525524509	chr15	98566963	98568068	+	0	NA	TTS (NM_007478)	TTS (NM_007478)	-8886	NM_024169	66120	Mm.30729	NM_024169	ENSMUSG00000003355	Fkbp11	1110002O23Rik|FKBP-11	FK506 binding protein 11	protein-coding
common_peak1-15581-33-14-1.42444696691701-3.13557888369249	chr4	128729362	128730691	+	0	NA	Intergenic	ID_B1|SINE|B4	-5489	NM_029219	75234	Mm.259672	NM_029219	ENSMUSG00000028793	Rnf19b	4930534K13Rik|4930555L03Rik|Ibrdc3	ring finger protein 19B	protein-coding
unique_peak1-1330-16-2-2.53330114154691-3.78760380288747	chr12	8662121	8662878	+	0	NA	Intergenic	(CAAA)n|Simple_repeat|Simple_repeat	-18441	NM_001160221	80913	Mm.341243	NM_030723	ENSMUSG00000020594	Pum2	5730503J23Rik|Pumm2|mKIAA0235	pumilio RNA-binding family member 2	protein-coding
unique_peak1-6624-7-6--0.00826409175941478-0.97990265578305	chr8	8439416	8439938	+	0	NA	Intergenic	Intergenic	221096	NM_010111	13642	Mm.209813	NM_010111	ENSMUSG00000001300	Efnb2	ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1	ephrin B2	protein-coding
common_peak1-8210-18-21--0.146512467408946-0.306326795069975	chr10	7663078	7663904	+	0	NA	intron (NM_138667, intron 1 of 6)	intron (NM_138667, intron 1 of 6)	12430	NM_138667	68652	Mm.193041	NM_138667	ENSMUSG00000015755	Tab2	1110030N06Rik|A530078N03Rik|Map3k7ip2|mKIAA0733	TGF-beta activated kinase 1/MAP3K7 binding protein 2	protein-coding
common_peak1-10807-19-19-0.0807592317743238-0.322753776620787	chr14	79390059	79390980	+	0	NA	intron (NM_027906, intron 14 of 44)	intron (NM_027906, intron 14 of 44)	141534	NM_173758	219189	Mm.159651	NM_027906	ENSMUSG00000058997	Vwa8	1300010F03Rik|4932416F07Rik|AI957255|Kiaa0564|mKIAA0564	von Willebrand factor A domain containing 8	protein-coding
common_peak1-13514-17-26--0.53659116395843-0.538442145997695	chr2	109280789	109281508	+	0	NA	Intergenic	Intergenic	160253	NM_139303	228421	Mm.274086	NM_139303	ENSMUSG00000027115	Kif18a	AU024633|B130001M12Rik	kinesin family member 18A	protein-coding
unique_peak1-4755-8-3-1.00522241794757-1.39487600375387	chr3	116945742	116946248	+	0	NA	Intergenic	Intergenic	117799	NM_177664	229791	Mm.140138	NM_177664	ENSMUSG00000044667	Lppr4	A330086D10|D3Bwg0562e|PRG-1|mKIAA0455	lipid phosphate phosphatase-related protein type 4	protein-coding
common_peak2-24735-16-16-0.0308008010177225-0.307611222530525	chr17	47687579	47688176	+	0	NA	intron (NM_001081635, intron 1 of 6)	MT2B|LTR|ERVL	-42539	NM_007632	12445	Mm.27291	NM_007632	ENSMUSG00000034165	Ccnd3	9230106B05Rik|AA682053|AL024085|AW146355|C78795	cyclin D3	protein-coding
common_peak2-21401-11-8-0.338768582809301-1.14218153353838	chr11	81914377	81914851	+	0	NA	promoter-TSS (NM_011331)	promoter-TSS (NM_011331)	-733	NM_011331	20293	Mm.867	NM_011331	ENSMUSG00000035352	Ccl12	MCP-5|Scya12	chemokine (C-C motif) ligand 12	protein-coding
unique_peak2-34817-6-17--1.60452689106201-1.49151883326343	chr15	74930150	74930851	+	0	NA	Intergenic	L1Md_F|LINE|L1	11879	NM_001099217	100041546	Mm.482110	NM_001099217	ENSMUSG00000022584	Ly6c2	Ly-6C.2|Ly-6C2	lymphocyte antigen 6 complex, locus C2	protein-coding
common_peak1-8833-10-19--0.965512749878593-0.917676348953458	chr11	23730305	23730926	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-59645	NM_009044	19696	Mm.4869	NM_009044	ENSMUSG00000020275	Rel	c-Rel	reticuloendotheliosis oncogene	protein-coding
unique_peak2-37665-6-14--1.34149248522822-1.01572999746118	chr5	92897962	92898712	+	0	NA	intron (NM_007644, intron 2 of 11)	intron (NM_007644, intron 2 of 11)	10754	NR_105843	102466159		NR_105843	miRBase:MI0021953	Mir6415	mmu-mir-6415	microRNA mir-6415	ncRNA
common_peak1-9210-15-9-0.690236655668294-0.732381977911291	chr11	82907497	82908330	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-22434	NM_011407	20555	Mm.10948	NM_011407	ENSMUSG00000078763	Slfn1	AV316259	schlafen 1	protein-coding
common_peak2-30289-8-7-0.00522241794757061-1.00793137938329	chr7	19130984	19131427	+	0	NA	Intergenic	Intergenic	-13629	NM_054060	114868	Mm.389809	NM_054060	ENSMUSG00000070798	Psg25	cea13	pregnancy-specific glycoprotein 25	protein-coding
common_peak1-9921-9-27--1.61774151565338-2.34622402919155	chr12	100110044	100110581	+	0	NA	intron (NM_001081191, intron 7 of 43)	intron (NM_001081191, intron 7 of 43)	29382	NM_001081191	319670	Mm.390484	NM_001081191	ENSMUSG00000051166	Eml5	BC027154|C130068M19Rik	echinoderm microtubule associated protein like 5	protein-coding
common_peak1-12446-34-47--0.20289397371989-0.362058538051628	chr17	80479562	80480588	+	0	NA	Intergenic	RMER6B|LTR|ERVK	-18467	NM_144802	72692	Mm.64579	NM_144802	ENSMUSG00000024095	Hnrnpll	2510028H02Rik|2810036L13Rik|AI256697|AI852082|Hnrpll	heterogeneous nuclear ribonucleoprotein L-like	protein-coding
common_peak1-18014-31-24-0.581382481038399-0.907273387067398	chr7	141339765	141341040	+	0	NA	intron (NM_007400, intron 2 of 22)	(CA)n|Simple_repeat|Simple_repeat	76378	NM_007400	11489	Mm.439714	NM_007400	ENSMUSG00000054555	Adam12	Mltna|mKIAA4001	a disintegrin and metallopeptidase domain 12 (meltrin alpha)	protein-coding
common_peak2-29781-13-9-0.456543935750406-0.53895475198017	chr6	88925953	88926487	+	0	NA	Intergenic	Intergenic	73975	NM_011906	24100	Mm.284480	NM_011906	ENSMUSG00000002871	Tpra1	40kDa|Gpr175|Tpra40	transmembrane protein, adipocyte asscociated 1	protein-coding
common_peak1-16860-14-11-0.314253659636488-0.435191258261915	chr6	55619281	55620004	+	0	NA	Intergenic	Intergenic	11615	NM_009717	11922	Mm.5106	NM_009717	ENSMUSG00000037984	Neurod6	Atoh2|Math-2|Math2|Nex|Nex1m|bHLHa2	neurogenic differentiation 6	protein-coding
common_peak1-18342-59-107--0.42952350129089-1.15052193417603	chr8	66860076	66861274	+	0	NA	Intergenic	Intergenic	132563	NR_030491	735270		NR_030491	miRBase:MI0004694	Mir710	Mirn710|mmu-mir-710	microRNA 710	ncRNA
common_peak2-22811-30-38--0.115726809370376-0.312769113767451	chr14	14702910	14703816	+	0	NA	Intergenic	Intergenic	90464	NM_001285780	66231	Mm.295875	NM_025435	ENSMUSG00000053453	Thoc7	Nif3l1bp1	THO complex 7 homolog (Drosophila)	protein-coding
common_peak2-24243-40-30-0.704779372364223-1.49688973786044	chr16	90884957	90886059	+	0	NA	intron (NM_027627, intron 4 of 6)	intron (NM_027627, intron 4 of 6)	49586	NM_026502	68001	Mm.45374	NM_026502	ENSMUSG00000022972	1110004E09Rik	-	RIKEN cDNA 1110004E09 gene	protein-coding
unique_peak2-38817-3-8--1.58390809140159-1.39487600375387	chr7	139250498	139250930	+	0	NA	intron (NM_018867, intron 9 of 13)	intron (NM_018867, intron 9 of 13)	92571	NM_173410	233919	Mm.208740	NM_173410		Gpr26	9630036A11Rik|A730021D22	G protein-coupled receptor 26	protein-coding
unique_peak2-38203-3-7--1.41398308995928-1.23214870625617	chr6	112946321	112946761	+	0	NA	Intergenic	MTD|LTR|MaLR	-49281	NM_080448	259302	Mm.236401	NM_080448	ENSMUSG00000030257	Srgap3	AI452337|Arhgap14|D130026O08Rik|Gbi|MEGAP|WRP|mKIAA0411	SLIT-ROBO Rho GTPase activating protein 3	protein-coding
unique_peak1-5279-13-6-0.971117108580164-1.01572999746118	chr5	66042543	66043194	+	0	NA	intron (NM_001081321, intron 11 of 31)	intron (NM_001081321, intron 11 of 31)	46227	NM_001081321	71521	Mm.278974	NM_027818	ENSMUSG00000029202	Pds5a	9030416H16Rik|E230024D05Rik|mKIAA0648	PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	protein-coding
unique_peak2-33180-2-6--1.72480917832092-1.26211192963361	chr10	95939984	95940413	+	0	NA	Intergenic	Intergenic	-139437	NM_007569	12226	Mm.23811	NM_007569	ENSMUSG00000036478	Btg1	AI426953|AW546738	B cell translocation gene 1, anti-proliferative	protein-coding
common_peak1-12622-36-22-0.955759130110741-2.05089002217436	chr18	32239349	32240911	+	0	NA	exon (NM_173441, exon 3 of 14)	exon (NM_173441, exon 3 of 14)	12742	NM_173441	73473	Mm.66853	NM_173441	ENSMUSG00000024384	Iws1	1700069O15Rik|3000008H23|AL117927|AW214353	IWS1 homolog (S. cerevisiae)	protein-coding
unique_peak1-954-9-1-2.18961340640422-2.31132995230379	chr11	59664790	59665296	+	0	NA	intron (NM_134029, intron 1 of 4)	intron (NM_134029, intron 1 of 4)	3468	NM_134029	103850	Mm.41761	NM_134029	ENSMUSG00000032615	Nt5m	2010013E09Rik|AI846937|dNT-2	5',3'-nucleotidase, mitochondrial	protein-coding
unique_peak1-2677-8-1-2.00522241794757-2.05605744720049	chr16	58446764	58447257	+	0	NA	intron (NM_028523, intron 4 of 15)	B4A|SINE|B4	38362	NM_028523	73379	Mm.373589	NM_028523	ENSMUSG00000035107	Dcbld2	1700055P21Rik|AW146002|CLCP1|Esdn	discoidin, CUB and LCCL domain containing 2	protein-coding
common_peak2-20938-44-68--0.286631622209634-0.511500665010653	chr11	8663704	8664979	+	0	NA	Intergenic	Intergenic	-99803	NM_001083587	319939	Mm.337820	NM_001083587	ENSMUSG00000020422	Tns3	BC023928|F830010I22Rik|TEM6|Tens1	tensin 3	protein-coding
unique_peak2-37658-6-7--0.434601889619698-0.97990265578305	chr5	92218584	92219143	+	0	NA	Intergenic	Intergenic	-22537	NR_045383	73452	Mm.396233	NR_045383		1700063O14Rik	-	RIKEN cDNA 1700063O14 gene	ncRNA
unique_peak2-37661-9-8-0.0196884049619079-1.03275496310833	chr5	92809926	92810354	+	0	NA	intron (NM_181728, intron 2 of 9)	(TTTG)n|Simple_repeat|Simple_repeat	-17818	NR_038116	56066	Mm.131723	NM_019494	ENSMUSG00000060183	Cxcl11	Cxc11|H174|I-tac|Ip9|Itac|Scyb11|Scyb9b|b-R1|betaR1	chemokine (C-X-C motif) ligand 11	protein-coding
unique_peak2-38510-4-8--1.19338551529556-1.21878474469819	chr7	44468075	44468465	+	0	NA	Intergenic	Intergenic	2051634	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak1-14717-13-14--0.12841856497075-0.301029995663977	chr3	79287415	79288104	+	0	NA	intron (NM_001162999, intron 12 of 16)	Lx8|LINE|L1	83842	NM_001162999	329679	Mm.244005	NM_001162999	ENSMUSG00000061175	Fnip2	D630023B12Rik|mKIAA1450	folliculin interacting protein 2	protein-coding
common_peak2-25278-22-9-1.32535601020004-2.00244947055753	chr18	69169267	69169877	+	0	NA	Intergenic	Intergenic	12355	NR_105780	102465187		NR_105780	miRBase:MI0021890	Mir145b	mmu-mir-145b	microRNA mir-145b	ncRNA
unique_peak2-37076-8-10--0.454209200689727-1.078512453669	chr3	148917926	148918486	+	0	NA	Intergenic	L1MB3|LINE|L1	-19495	NR_040591	381482	Mm.393866	NR_040591		Gm1653	-	predicted gene 1653	ncRNA
unique_peak1-5449-7-4-0.477162735410827-1.09384600808989	chr5	118709365	118709866	+	0	NA	intron (NM_001081236, intron 4 of 4)	intron (NM_001081236, intron 4 of 4)	14379	NM_001081236	76792	Mm.103428	NM_001081236		2410131K14Rik	-	RIKEN cDNA 2410131K14 gene	protein-coding
common_peak1-8657-27-34--0.137737066049731-0.314192449397093	chr10	127739388	127740303	+	0	NA	promoter-TSS (NM_001252327)	promoter-TSS (NM_001252327)	-546	NM_133992	103135	Mm.244183	NM_133992	ENSMUSG00000005682	Pan2	1200014O24Rik|AI047843|AW742773|Usp52|mKIAA0710	PAN2 polyA specific ribonuclease subunit homolog (S. cerevisiae)	protein-coding
common_peak1-9150-9-13--0.617741515653384-0.459837087125828	chr11	76857544	76858028	+	0	NA	TTS (NM_001012309)	TTS (NM_001012309)	33888	NR_030756	751519		NR_030756		Mir423	Mirn423|mmu-mir-423	microRNA 423	ncRNA
common_peak1-16052-31-69--0.904044346131843-2.43183886932982	chr5	43233050	43233913	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-391221	NM_175937	231207	Mm.7233	NM_175937	ENSMUSG00000039782	Cpeb2	A630055H10Rik|Cpe-bp2	cytoplasmic polyadenylation element binding protein 2	protein-coding
common_peak2-30304-21-22-0.0459273092092225-0.319918318021793	chr7	19796630	19797463	+	0	NA	promoter-TSS (NM_175668)	promoter-TSS (NM_175668)	-841	NM_175668	319197	Mm.135984	NM_175668	ENSMUSG00000044317	Gpr4	-	G protein-coupled receptor 4	protein-coding
common_peak1-15918-13-22--0.745089925419244-0.690311289528838	chr5	24100906	24101617	+	0	NA	exon (NM_025891, exon 6 of 13)	exon (NM_025891, exon 6 of 13)	3329	NR_030423	735264		NR_030423		Mir671	Mirn671|mmu-mir-671	microRNA 671	ncRNA
common_peak2-32410-7-9--0.522837264589173-1.05908390183068	chrX	155193596	155194129	+	0	NA	Intergenic	Intergenic	-499852	NM_148945	110651	Mm.328476	NM_148945	ENSMUSG00000031309	Rps6ka3	C130006E23|MAPKAPK-1b|MPK-9|Rsk2|S6K-alpha3|p90RSK3|pp90RSK2	ribosomal protein S6 kinase polypeptide 3	protein-coding
common_peak1-9394-12-25--1.05166373305345-1.1381569562463	chr11	99580562	99581233	+	0	NA	Intergenic	Intergenic	53330	NM_001126322	100040276	Mm.475095	NM_001126322	ENSMUSG00000078668	Gm11595	OTTMUSG00000002543	predicted gene 11595	protein-coding
common_peak1-14891-36-68--0.629203370610415-1.32472457598199	chr3	96171570	96172784	+	0	NA	Intergenic	RLTR6-int|LTR|ERV1	46579	NR_001579	21748		NR_001579	ENSMUSG00000064796	Terc	mTER|mTR	telomerase RNA component	ncRNA
common_peak2-21911-8-15--0.994777582052429-0.771068449301683	chr12	8921996	8922750	+	0	NA	Intergenic	L1MA9|LINE|L1	-5740	NM_008640	17775	Mm.30071	NM_008640	ENSMUSG00000020585	Laptm4a	AA286466|LAPTM4|MTP|Mtrp|mKIAA0108	lysosomal-associated protein transmembrane 4A	protein-coding
unique_peak1-696-25-6-2.0544949832875-3.87314773301527	chr10	80282539	80283631	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-6316	NM_001301034	18245	Mm.398119	NM_008753	ENSMUSG00000035242	Oaz1	AZ-1|AZ1|Antizyme|ODC-Az|Oaz	ornithine decarboxylase antizyme 1	protein-coding
unique_peak1-3505-16-4-1.7963355473807-2.18192634393779	chr19	16029130	16029992	+	0	NA	TTS (NM_198019)	TTS (NM_198019)	29918	NM_198019	208518	Mm.105652	NM_198019	ENSMUSG00000041491	Cep78	5730599I05Rik|D030027P05	centrosomal protein 78	protein-coding
common_peak1-18562-51-14-2.16803322999405-8.4899773957265	chr8	104885957	104887687	+	0	NA	Intergenic	Intergenic	422189	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
unique_peak1-4660-16-11-0.533301141546906-0.58239619684445	chr3	90621262	90622049	+	0	NA	Intergenic	L1_Mus2|LINE|L1	90827	NM_207263	384997	Mm.316644	NM_207263	ENSMUSG00000042250	Pglyrp4	Gm1478|Gm413	peptidoglycan recognition protein 4	protein-coding
common_peak1-11413-51-72--0.114900733277445-0.340093681644832	chr15	99125729	99127266	+	0	NA	intron (NM_018786, intron 1 of 25)	intron (NM_018786, intron 1 of 25)	657	NM_018786	54614	Mm.358668	NM_018786	ENSMUSG00000023007	Prpf40b	2610317D23Rik|Hypc	PRP40 pre-mRNA processing factor 40 homolog B (yeast)	protein-coding
common_peak1-12549-23-19-0.399839409621718-0.538442145997695	chr18	6280287	6281273	+	0	NA	Intergenic	Intergenic	-39258	NM_008448	16573	Mm.223744	NM_008448	ENSMUSG00000006740	Kif5b	AL022807|Khc|Khcs|Kns1|Ukhc	kinesin family member 5B	protein-coding
unique_peak2-39177-1-4--1.94898510510411-1.10720996964787	chr8	95001980	95002258	+	0	NA	Intergenic	Intergenic	120424	NM_018826	54352	Mm.101153	NM_018826	ENSMUSG00000031737	Irx5	-	Iroquois related homeobox 5 (Drosophila)	protein-coding
common_peak2-25977-15-13-0.204809828498052-0.368541233333383	chr19	53555519	53555966	+	0	NA	Intergenic	Intergenic	-16456	NR_028427	381232	Mm.248624	NR_028427	ENSMUSG00000097636	5830416P10Rik	4833407H14Rik|5430437C04Rik|ENSMUSG00000074788|Gm10758	RIKEN cDNA 5830416P10 gene	ncRNA
unique_peak2-34090-22-43--0.812147513549893-1.34810744351377	chr13	12634474	12636054	+	0	NA	Intergenic	Intergenic	-22547	NM_133643	171211	Mm.159671	NM_133643	ENSMUSG00000095105	Edaradd	1810032E07Rik|5830469M23Rik|A630043P06|cr	EDAR (ectodysplasin-A receptor)-associated death domain	protein-coding
common_peak2-19656-20-28--0.369906210536379-0.457753417732779	chr1	51477440	51478283	+	0	NA	Intergenic	RLTR13B1|LTR|ERVK	57382	NM_028696	109019	Mm.196290	NM_028696	ENSMUSG00000026107	Nabp1	4930434H03Rik|4930442A21Rik|4930488J04Rik|4933440J18Rik|5830411E10Rik|AI852561|Nbp1|Obfc2a|Ssb2	nucleic acid binding protein 1	protein-coding
common_peak2-22463-14-10-0.439784541720347-0.519648556297791	chr13	45685976	45686644	+	0	NA	intron (NM_001199304, intron 5 of 6)	intron (NM_001199304, intron 5 of 6)	83472	NM_025508	66355	Mm.290802	NM_025508	ENSMUSG00000000253	Gmpr	2310004P21Rik|AV028449	guanosine monophosphate reductase	protein-coding
unique_peak2-37069-5-8--0.874305337448166-1.10484139239135	chr3	145072685	145073080	+	0	NA	intron (NM_027770, intron 24 of 59)	intron (NM_027770, intron 24 of 59)	117446	NM_027770	71355	Mm.235570	NM_027770	ENSMUSG00000028197	Col24a1	5430404K19Rik	collagen, type XXIV, alpha 1	protein-coding
unique_peak2-37634-1-7--2.62705701021674-1.80617997398389	chr5	73366880	73367139	+	0	NA	intron (NM_153567, intron 8 of 8)	intron (NM_153567, intron 8 of 8)	-31134	NM_173403	231290	Mm.491387	NM_173403		Slc10a4	E130304D01	solute carrier family 10 (sodium/bile acid cotransporter family), member 4	protein-coding
common_peak2-23832-91-124-0.107647660940251-0.40250768253397	chr15	101379951	101382502	+	0	NA	promoter-TSS (NM_053249)	promoter-TSS (NM_053249)	-136	NM_053249	114566	Mm.458432	NM_053249	ENSMUSG00000049548	Krt82	Krt2-20	keratin 82	protein-coding
common_peak2-21964-23-9-1.39983940962172-2.17218792383888	chr12	40248082	40248626	+	0	NA	Intergenic	Intergenic	515609	NM_007487	11861	Mm.12723	NM_007487	ENSMUSG00000047446	Arl4a	AI467555|Arl4	ADP-ribosylation factor-like 4A	protein-coding
common_peak1-9077-10-8-0.186490343566457-1.078512453669	chr11	69442414	69443126	+	0	NA	Intergenic	Intergenic	-3703	NM_011814	23879	Mm.41930	NM_011814	ENSMUSG00000018765	Fxr2	Fxr2h	fragile X mental retardation, autosomal homolog 2	protein-coding
common_peak1-17392-17-20--0.174021084573723-0.306598483909156	chr7	142392631	142393480	+	0	NA	Intergenic	PB1D9|SINE|Alu	-5370	NR_046050	74314	Mm.415339	NR_046050		1700120G07Rik	-	RIKEN cDNA 1700120G07 gene	ncRNA
common_peak2-26395-27-48--0.623163893219973-1.00060938969219	chr2	53191372	53192101	+	0	NA	Intergenic	L1_Mus1|LINE|L1	140618	NM_022989	65103	Mm.37623	NM_022989	ENSMUSG00000026960	Arl6ip6	2310057C01Rik|2610529A11Rik|Aip-6	ADP-ribosylation factor-like 6 interacting protein 6	protein-coding
common_peak2-27066-10-6-0.549060422951165-1.21398586181642	chr2	181693251	181693704	+	0	NA	Intergenic	Intergenic	-32454	NM_001205282	672125	Mm.489571	NM_001205282	ENSMUSG00000053277	Gm14496	OTTMUSG00000016837	predicted gene 14496	protein-coding
common_peak1-13300-16-10-0.658832023630764-0.699649909729472	chr19	40587878	40588584	+	0	NA	promoter-TSS (NM_178362)	promoter-TSS (NM_178362)	-5	NM_178362	20411	Mm.210815	NM_009166		Sorbs1	2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296	sorbin and SH3 domain containing 1	protein-coding
common_peak2-30188-22-47--0.937678395633752-1.78434948019896	chr7	28802494	28804040	+	0	NA	Intergenic	MTD|LTR|MaLR	-4133	NM_001254951	100043772	Mm.129275	NM_001100456		Zfp850	C130069I09Rik|Gm4636	zinc finger protein 850	protein-coding
common_peak1-9084-38-14-1.66456206369001-4.5819768714626	chr11	69695408	69696440	+	0	NA	promoter-TSS (NR_105889)	promoter-TSS (NR_105889)	-328	NR_105889	102466208		NR_105889		Mir6924	mmu-mir-6924	microRNA mir-6924	ncRNA
unique_peak1-1009-15-9-0.690236655668294-0.732381977911291	chr11	73326015	73326680	+	0	NA	Intergenic	MusHAL1|LINE|L1	4352	NM_146443	258435	Mm.377500	NM_146443	ENSMUSG00000095312	Olfr382	MOR135-14	olfactory receptor 382	protein-coding
common_peak1-11721-15-17--0.157760250886656-0.307611222530528	chr16	32745058	32745836	+	0	NA	intron (NM_080457, intron 1 of 26)	GA-rich|Low_complexity|Low_complexity	9475	NM_080457	140474	Mm.214599	NM_080457	ENSMUSG00000079620	Muc4	4933405I11Rik|Asgp	mucin 4	protein-coding
unique_peak2-34227-9-13--0.617741515653384-0.459837087125828	chr13	51153678	51154330	+	0	NA	Intergenic	MERVL-int|LTR|ERVL	42092	NR_029463	77428	Mm.405630	NR_029463		9430083A17Rik	-	RIKEN cDNA 9430083A17 gene	ncRNA
unique_peak1-3954-19-9-1.08075923177432-1.37307999835977	chr2	30322746	30323594	+	0	NA	Intergenic	Intergenic	6549	NM_030244	72500	Mm.295464	NM_030244	ENSMUSG00000089762	Ier5l	2610524G09Rik	immediate early response 5-like	protein-coding
common_peak2-22379-15-9-0.690236655668294-0.732381977911291	chr13	30367279	30367687	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-60742	NM_177322	11607	Mm.35062	NM_177322	ENSMUSG00000049115	Agtr1a	1810074K20Rik|AG2S|AI551199|AT1|AT1a|AT2R1|AT2R1A|Agtr-1a|Agtr1|Angtr-1a	angiotensin II receptor, type 1a	protein-coding
unique_peak1-2914-11-3-1.50869358425161-1.95434855131066	chr17	47738359	47738871	+	0	NA	exon (NM_016859, exon 7 of 7)	exon (NM_016859, exon 7 of 7)	8199	NM_007632	12445	Mm.27291	NM_007632	ENSMUSG00000034165	Ccnd3	9230106B05Rik|AA682053|AL024085|AW146355|C78795	cyclin D3	protein-coding
unique_peak1-6187-25-4-2.53992181045774-4.94184174098665	chr6	146967550	146968398	+	0	NA	intron (NM_001170433, intron 18 of 27)	intron (NM_001170433, intron 18 of 27)	-13085	NM_025620	66532	Mm.45888	NM_025620	ENSMUSG00000040121	Rep15	2210417D09Rik	RAB15 effector protein	protein-coding
common_peak2-29040-47-63--0.0651585752334523-0.308035049112909	chr5	114774354	114775171	+	0	NA	intron (NM_001164573, intron 5 of 30)	(CA)n|Simple_repeat|Simple_repeat	9812	NM_001164573	231646	Mm.238285	NM_146163	ENSMUSG00000066952	Myo1h	4631401O15Rik	myosin 1H	protein-coding
common_peak2-22549-24-26-0.0383224006042484-0.317118655902073	chr13	59769059	59769881	+	0	NA	intron (NM_001035122, intron 1 of 9)	L1M3|LINE|L1	7675	NM_001035122	105348	Mm.171335	NM_027307	ENSMUSG00000021556	Golm1	2310001L02Rik|AW125446|D030064E01Rik|GP73|Golph2|PSEC0257	golgi membrane protein 1	protein-coding
unique_peak1-2256-23-7-1.72176750450908-2.82905316394614	chr15	77808852	77809970	+	0	NA	Intergenic	Intergenic	-8157	NM_018749	55944	Mm.3955	NM_018749	ENSMUSG00000016554	Eif3d	66/67kDa|AA407891|Eif3s7|eIF3p66	eukaryotic translation initiation factor 3, subunit D	protein-coding
common_peak1-10570-67-73-0.334958117154045-0.825549665544934	chr14	21830975	21831973	+	0	NA	intron (NM_009502, intron 13 of 20)	intron (NM_009502, intron 13 of 20)	40190	NM_018829	55946	Mm.376269	NM_018829		Ap3m1	1200013D09Rik|C78982|R75378	adaptor-related protein complex 3, mu 1 subunit	protein-coding
common_peak2-31926-13-8-0.608547029195456-0.660903317613904	chr9	62858082	62858520	+	0	NA	Intergenic	Intergenic	-29615	NM_019663	56469	Mm.431253	NM_019663	ENSMUSG00000032405	Pias1	2900068C24Rik|Ddxbp1|GBP	protein inhibitor of activated STAT 1	protein-coding
unique_peak1-6511-7-0-2.79909083029819-2.40823996531185	chr7	117087305	117087744	+	0	NA	intron (NM_021494, intron 1 of 22)	intron (NM_021494, intron 1 of 22)	16412	NM_021494	19347	Mm.21904	NM_021494	ENSMUSG00000035901	Dennd5a	1500012B19Rik|AJ245569|AW496491|ORF37|Rab6ip1|mKIAA1091	DENN/MADD domain containing 5A	protein-coding
common_peak1-12493-17-15-0.218296338205038-0.403453972741633	chr17	87246573	87247306	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-69749	NM_001277980	78469	Mm.67234	NM_030104	ENSMUSG00000037689	Tmem247	1700090G07Rik	transmembrane protein 247	protein-coding
unique_peak1-3509-10-1-2.35641534500877-2.57096726280955	chr19	16254847	16255299	+	0	NA	intron (NM_008139, intron 1 of 6)	intron (NM_008139, intron 1 of 6)	16485	NR_033228	595139	Mm.405662	NR_033228		E030024N20Rik	9030417F11Rik|Ppia-ps8	peptidylprolyl isomerase A pseudogene 8	pseudo
unique_peak2-37165-5-13--1.51173525806346-1.78669045979184	chr4	45011774	45012429	+	0	NA	intron (NM_173399, intron 1 of 1)	intron (NM_173399, intron 1 of 1)	13183	NM_001163284	230119	Mm.44222	NM_173399	ENSMUSG00000049657	Zbtb5	5930421I10|9430083K24Rik|AI646847|mKIAA0354	zinc finger and BTB domain containing 5	protein-coding
common_peak1-19152-62-76-0.143964918107184-0.410334955492133	chr9	92229169	92231146	+	0	NA	intron (NM_001033184, intron 1 of 6)	intron (NM_001033184, intron 1 of 6)	25942	NM_001033184	78459	Mm.179195	NM_001033184	ENSMUSG00000074139	1700057G04Rik	-	RIKEN cDNA 1700057G04 gene	protein-coding
unique_peak2-36301-9-11--0.395349094316936-0.344532117358383	chr2	73213819	73214380	+	0	NA	intron (NM_001276443, intron 3 of 16)	intron (NM_001276443, intron 3 of 16)	10438	NM_001276443	68526	Mm.451014	NM_001080707	ENSMUSG00000041762	Gpr155	1110017O10Rik|DEPDC3|F730029F15Rik|PGR22	G protein-coupled receptor 155	protein-coding
unique_peak1-3730-12-2-2.06381348436648-2.79529063155376	chr19	46522462	46523052	+	0	NA	intron (NM_001025391, intron 3 of 11)	intron (NM_001025391, intron 3 of 11)	51371	NM_015752	24069	Mm.41210	NM_015752	ENSMUSG00000025231	Sufu	Su(fu)	suppressor of fused homolog (Drosophila)	protein-coding
unique_peak1-6646-9-4-0.867685311516858-1.36011389749466	chr8	11327830	11328385	+	0	NA	intron (NM_009932, intron 3 of 47)	intron (NM_009932, intron 3 of 47)	15278	NM_009932	12827	Mm.181021	NM_009932	ENSMUSG00000031503	Col4a2	Col4a-2	collagen, type IV, alpha 2	protein-coding
common_peak2-30427-11-12--0.191746133889479-0.310474156842889	chr7	43579670	43580283	+	0	NA	Intergenic	Intergenic	2939928	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak1-640-12-1-2.64877598508764-3.36932189928148	chr10	42135107	42135814	+	0	NA	intron (NM_145743, intron 5 of 12)	intron (NM_145743, intron 5 of 12)	62911	NM_145743	215951	Mm.89646	NM_145743	ENSMUSG00000038302	Lace1	CG8520	lactation elevated 1	protein-coding
common_peak2-21702-98-161--0.138081309454074-0.439262227143157	chr11	106787201	106789459	+	0	NA	Intergenic	Intergenic	-6301	NM_025481	66313	Mm.340955	NM_025481	ENSMUSG00000018363	Smurf2	2810411E22Rik|AI558114|AI649275	SMAD specific E3 ubiquitin protein ligase 2	protein-coding
unique_peak1-5366-7-3-0.799090830298189-1.23214870625617	chr5	93298031	93298516	+	0	NA	intron (NM_001077595, intron 1 of 9)	URR1B|DNA|MER1_type	-28746	NM_001077596	27428	Mm.46014	NM_015756	ENSMUSG00000029381	Shroom3	AL022960|D5Ertd287e|Shrm|Shrm3	shroom family member 3	protein-coding
common_peak2-21748-22-33--0.440178736162935-0.541406350295756	chr11	115911306	115912597	+	0	NA	intron (NM_172569, intron 5 of 15)	intron (NM_172569, intron 5 of 15)	20321	NM_172569	217331	Mm.297706	NM_172569	ENSMUSG00000020770	Unk	B230379M23Rik|Zc3h5|Zc3hdc5|mKIAA1753	unkempt homolog (Drosophila)	protein-coding
common_peak1-13137-56-55-0.428240903381639-0.97183630865368	chr19	9954008	9956017	+	0	NA	intron (NM_016692, intron 10 of 17)	intron (NM_016692, intron 10 of 17)	19011	NM_016692	16319	Mm.29755	NM_016692	ENSMUSG00000024660	Incenp	2700067E22Rik|AU019509|C130081E20|C77457	inner centromere protein	protein-coding
common_peak1-18639-10-7-0.356415345008769-1.12966497611638	chr8	111237335	111237928	+	0	NA	promoter-TSS (NM_007496)	promoter-TSS (NM_007496)	-913	NM_007496	11906	Mm.416972	NM_007496	ENSMUSG00000038872	Zfhx3	A230102L03Rik|Atbf1|WBP9|mKIAA4228	zinc finger homeobox 3	protein-coding
common_peak2-19535-33-33-0.24387472127519-0.447010559430123	chr1	86703530	86704419	+	0	NA	Intergenic	Intergenic	791411	NM_030194	109032	Mm.335802	NM_030194	ENSMUSG00000070034	Sp110	5031415C07Rik|52kDa|5830484A20Rik|ENSMUSG00000075603|Ifi75|Ipr1	Sp110 nuclear body protein	protein-coding
common_peak2-32185-48-88--0.504806279731583-1.20397006444706	chr9	116174305	116175818	+	0	NA	Intergenic	Intergenic	-90580	NM_009371	21813	Mm.172346	NM_009371	ENSMUSG00000032440	Tgfbr2	1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII	transforming growth factor, beta receptor II	protein-coding
unique_peak2-33224-2-5--1.50241675698448-1.08602067057793	chr10	120113065	120113442	+	0	NA	Intergenic	Intergenic	-89535	NR_038000	70874	Mm.427286	NR_038000	ENSMUSG00000044544	4921513I03Rik	-	RIKEN cDNA 4921513I03 gene	ncRNA
unique_peak1-4140-8-0-3.00522241794757-2.70926996097583	chr2	92757896	92758514	+	0	NA	intron (NM_030725, intron 1 of 5)	Charlie4a|DNA|MER1_type	2947	NM_030725	80976	Mm.33490	NM_030725	ENSMUSG00000027220	Syt13	5730409J20Rik|AI549909|mKIAA1427	synaptotagmin XIII	protein-coding
common_peak2-30385-27-51--0.708893767245856-1.25391625579201	chr7	29953383	29954244	+	0	NA	promoter-TSS (NM_182927)	promoter-TSS (NM_182927)	-147	NM_182927	101809	Mm.377262	NM_182927	ENSMUSG00000037239	Spred3	AW047143|D130060H24Rik|Spred-3	sprouty-related, EVH1 domain containing 3	protein-coding
unique_peak1-790-18-11-0.727956650507195-0.876666802405043	chr11	75562381	75563432	+	0	NA	intron (NM_009536, intron 1 of 5)	B1_Mm|SINE|Alu	16517	NM_009536	22627	Mm.234700	NM_009536	ENSMUSG00000020849	Ywhae	AU019196	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide	protein-coding
unique_peak1-4847-11-0-3.50869358425161-3.61235994796777	chr3	153586532	153587050	+	0	NA	intron (NM_007382, intron 11 of 11)	intron (NM_007382, intron 11 of 11)	-10861	NR_028094	19352	Mm.277831	NM_011231	ENSMUSG00000038975	Rabggtb	-	Rab geranylgeranyl transferase, b subunit	protein-coding
common_peak1-17776-39-104--1.09848427074697-4.69190562563082	chr7	97081585	97082577	+	0	NA	intron (NM_001291288, intron 2 of 5)	B1_Mus1|SINE|Alu	7633	NM_001291289	67669	Mm.28679	NM_026304		l7Rn6	0610007P06Rik|1110002N09Rik|l(7)6Rn	lethal, Chr 7, Rinchik 6	protein-coding
common_peak2-26123-69-91-0.0715804912017193-0.342618443965869	chr2	6322240	6323609	+	0	NA	intron (NM_181399, intron 4 of 13)	intron (NM_181399, intron 4 of 13)	49142	NM_181399	98910	Mm.40673	NM_181399	ENSMUSG00000039046	Usp6nl	AI316785|RNTRE|TRE2NL|mKIAA0019	USP6 N-terminal like	protein-coding
unique_peak2-36631-3-6--1.22133801201688-1.08602067057793	chr3	5218466	5218816	+	0	NA	promoter-TSS (NM_030708)	promoter-TSS (NM_030708)	87	NM_030708	80892	Mm.41522	NM_030708	ENSMUSG00000025255	Zfhx4	A930021B15|C130041O22Rik|Zfh-4|Zfh4	zinc finger homeodomain 4	protein-coding
unique_peak2-33408-1-6--2.43441193227435-1.56314192529759	chr11	55292286	55292643	+	0	NA	intron (NM_013716, intron 1 of 11)	intron (NM_013716, intron 1 of 11)	-3744	NR_028480	100303747	Mm.453534	NR_028480	ENSMUSG00000065061	Gm12238	Mbi-39|OTTMUSG00000005697	predicted gene 12238	snoRNA
common_peak2-22824-11-12--0.191746133889479-0.310474156842889	chr14	19823379	19823941	+	0	NA	Intergenic	Intergenic	-97519	NM_144839	218793	Mm.23551	NM_144839	ENSMUSG00000058317	Ube2e2	BC016265	ubiquitin-conjugating enzyme E2E 2	protein-coding
common_peak1-12255-9-5-0.604650905683064-1.21398586181642	chr17	36256734	36257262	+	0	NA	intron (NR_046286, intron 4 of 9)	ID2|SINE|ID	1382	NM_010395	15024	Mm.426031	NM_010395	ENSMUSG00000079491	H2-T10	H-2T10	histocompatibility 2, T region locus 10	protein-coding
unique_peak1-6354-11-6-0.701338662194009-1.32595962126035	chr7	64391558	64392124	+	0	NA	intron (NM_008074, intron 3 of 9)	MT2A|LTR|ERVL	250400	NM_008074	14407	Mm.434343	NM_008074		Gabrg3	B230362M20Rik|Gabrg-3	gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3	protein-coding
common_peak2-30307-11-16--0.578769256998726-0.503257505534083	chr7	19919960	19920608	+	0	NA	Intergenic	(TC)n|Simple_repeat|Simple_repeat	-10136	NM_001127324	13870	Mm.280913	NM_007948	ENSMUSG00000003549	Ercc1	Ercc-1	excision repair cross-complementing rodent repair deficiency, complementation group 1	protein-coding
common_peak1-13302-156-173-0.565839762326486-3.96511466735967	chr19	41262985	41265142	+	0	NA	intron (NM_011904, intron 1 of 20)	intron (NM_011904, intron 1 of 20)	17201	NM_011904	24087	Mm.89983	NM_011904	ENSMUSG00000025013	Tll2	-	tolloid-like 2	protein-coding
common_peak2-23979-19-17-0.232762325219374-0.392630012299441	chr16	17921963	17922788	+	0	NA	Intergenic	Intergenic	5937	NM_153150	13358	Mm.229291	NM_153150	ENSMUSG00000003528	Slc25a1	1300019P08Rik|2610100G11Rik|AI194714|Ctp|Dgsj|Slc20a3	solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1	protein-coding
unique_peak1-4335-7-1-1.79909083029819-1.80617997398389	chr2	152815484	152815963	+	0	NA	intron (NM_001083618, intron 6 of 14)	intron (NM_001083618, intron 6 of 14)	25396	NM_178939	68559	Mm.12746	NM_178939	ENSMUSG00000027472	Pdrg1	1110004D19Rik|AU020945|AV006589|Pdrg	p53 and DNA damage regulated 1	protein-coding
unique_peak1-5299-11-3-1.50869358425161-1.95434855131066	chr5	73539807	73540370	+	0	NA	intron (NM_028194, intron 3 of 62)	intron (NM_028194, intron 3 of 62)	107769	NM_028194	72313	Mm.260594	NM_028194	ENSMUSG00000070733	Fryl	2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|mKIAA0826	furry homolog-like (Drosophila)	protein-coding
common_peak1-13631-39-27-0.80840632486155-1.70390620647625	chr2	25331631	25332810	+	0	NA	Intergenic	Intergenic	-6951	NM_008963	19215	Mm.1008	NM_008963	ENSMUSG00000015090	Ptgds	21kDa|L-PGDS|PGD2|PGDS|PGDS2|Ptgs3	prostaglandin D2 synthase (brain)	protein-coding
common_peak2-22063-7-8--0.370834171144123-1.00793137938329	chr12	71883389	71883828	+	0	NA	Intergenic	Intergenic	-42893	NM_028127	319710	Mm.2962	NM_028127	ENSMUSG00000048285	Frmd6	2610019M19Rik|4930488L10Rik|AW212977	FERM domain containing 6	protein-coding
common_peak1-16985-12-12--0.0516637330534535-0.309718203022949	chr6	87335153	87335811	+	0	NA	exon (NM_026860, exon 4 of 6)	exon (NM_026860, exon 4 of 6)	3447	NM_026860	68888	Mm.46387	NM_026860	ENSMUSG00000030048	Gkn3	1190003M12Rik	gastrokine 3	protein-coding
common_peak2-20739-51-80--0.264926177282051-0.551001890598192	chr10	105841067	105842315	+	0	NA	Intergenic	Intergenic	-65675	NM_177373	327814	Mm.391424	NM_177373	ENSMUSG00000053825	Ppfia2	5330438O12|B230207K17Rik|E130120L08Rik|mKIAA4112	protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	protein-coding
common_peak1-16053-10-23--1.22854715571239-1.44380006500971	chr5	43234280	43234808	+	0	NA	Intergenic	Intergenic	-390158	NM_175937	231207	Mm.7233	NM_175937	ENSMUSG00000039782	Cpeb2	A630055H10Rik|Cpe-bp2	cytoplasmic polyadenylation element binding protein 2	protein-coding
common_peak1-18792-14-9-0.577288065470282-0.630231561310125	chr9	35569463	35570175	+	0	NA	Intergenic	Intergenic	15875	NM_001167673	100312986	Mm.437659	NM_001167673	ENSMUSG00000090738	Gm17727	Pate-e	predicted gene, 17727	protein-coding
unique_peak1-5505-7-1-1.79909083029819-1.80617997398389	chr5	136478961	136479373	+	0	NA	intron (NM_023742, intron 2 of 10)	intron (NM_023742, intron 2 of 10)	8497	NM_001256098	74198	Mm.275574	NM_023742	ENSMUSG00000004947	Dtx2	2610524D08Rik|AA408415|AU022494|Deltex2	deltex 2 homolog (Drosophila)	protein-coding
common_peak1-7727-8-9--0.316705676939792-1.03275496310833	chr1	88462964	88463523	+	0	NA	intron (NM_008801, intron 1 of 4)	intron (NM_008801, intron 1 of 4)	15833	NM_008801	18582	Mm.12925	NM_008801	ENSMUSG00000026239	Pde6d	AI841218|PrBP/delta	phosphodiesterase 6D, cGMP-specific, rod, delta	protein-coding
common_peak1-14414-41-62--0.276131218651257-0.491755066901284	chr2	179976097	179977369	+	0	NA	Intergenic	Intergenic	-15351	NM_025587	66481	Mm.289669	NM_025587	ENSMUSG00000039001	Rps21	1810049N11Rik|2410030A14Rik	ribosomal protein S21	protein-coding
common_peak1-17946-21-15-0.569489265266236-0.756118839439552	chr7	127588661	127589357	+	0	NA	intron (NM_001278944, intron 8 of 29)	L1Md_F2|LINE|L1	23794	NM_001278944	233810		NM_001278943	ENSMUSG00000051900	Abca16	AY243472	ATP-binding cassette, sub-family A (ABC1), member 16	protein-coding
common_peak1-10826-47-18-1.68691391132296-5.66988446868992	chr14	101794977	101796257	+	0	NA	Intergenic	MLT1A0|LTR|MaLR	-196331	NM_029680	76627	Mm.31415	NM_029680	ENSMUSG00000042888	Prr30	1700110M21Rik	proline rich 30	protein-coding
common_peak2-23604-3-5--0.998945590680433-0.96108193396963	chr15	81400583	81400848	+	0	NA	Intergenic	Intergenic	-15929	NM_177821	328572	Mm.258397	NM_177821	ENSMUSG00000055024	Ep300	A430090G16|A730011L11|KAT3B|p300|p300 HAT	E1A binding protein p300	protein-coding
unique_peak1-2462-10-4-1.03448725012141-1.5150158574804	chr15	103518332	103518837	+	0	NA	Intergenic	Intergenic	-123072	NM_008134	14663	Mm.219621	NM_008134	ENSMUSG00000022491	Glycam1	MC26|Sgp50|glyCAM-1	glycosylation dependent cell adhesion molecule 1	protein-coding
common_peak1-7899-37-32-0.481598952127365-0.849650211186447	chr1	135534937	135536183	+	0	NA	intron (NM_001276767, intron 7 of 17)	intron (NM_001276767, intron 7 of 17)	21902	NM_001166552	667118	Mm.245357	NM_001166552		Zbed6	Gm8466|MGR	zinc finger, BED domain containing 6	protein-coding
common_peak1-12760-25-8-1.69192490390279-3.04993787975775	chr18	60623560	60624697	+	0	NA	Intergenic	MERVK26-int|LTR|ERVK	37509	NM_134133	106878	Mm.273197	NM_134133	ENSMUSG00000038059	Smim3	2010002N04Rik|AI195350|AW561905|Nid67|cI-41	small integral membrane protein 3	protein-coding
unique_peak2-39551-11-16--0.578769256998726-0.503257505534083	chr9	70034849	70035717	+	0	NA	Intergenic	MTD|LTR|MaLR	-19874	NM_181072	71602	Mm.249311	NM_181072	ENSMUSG00000032220	Myo1e	2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3	myosin IE	protein-coding
unique_peak2-37142-1-4--1.94898510510411-1.10720996964787	chr4	28815151	28815524	+	0	NA	intron (NM_001290434, intron 5 of 16)	intron (NM_001290434, intron 5 of 16)	75042	NM_001122889	13841	Mm.257266	NM_010141	ENSMUSG00000028289	Epha7	Cek11|Ebk|Ehk3|Hek11|Mdk1	Eph receptor A7	protein-coding
unique_peak2-33059-2-7--1.91745425626332-1.45399745587252	chr10	77139086	77139446	+	0	NA	Intergenic	CT-rich|Low_complexity|Low_complexity	-10048	NM_001287074	252974	Mm.221237	NM_145855	ENSMUSG00000069581	Tspear	C330046G03Rik|ORF65|TSP-EAR|Tnep1	thrombospondin type laminin G domain and EAR repeats	protein-coding
unique_peak1-84-13-7-0.778472030637769-0.817533494790411	chr1	43152932	43153493	+	0	NA	intron (NM_001013025, intron 2 of 12)	intron (NM_001013025, intron 2 of 12)	2255	NM_001013025	73122	Mm.246069	NM_001013025	ENSMUSG00000070939	Tgfbrap1	3110018K12Rik|AU024090|AU042859|AW742551|Trap1	transforming growth factor, beta receptor associated protein 1	protein-coding
common_peak2-31184-27-46--0.563042900782402-0.849650211186454	chr8	47714088	47714946	+	0	NA	intron (NM_001284409, intron 1 of 6)	intron (NM_001284409, intron 1 of 6)	11872	NM_009810	12367	Mm.34405	NM_009810		Casp3	A830040C14Rik|AC-3|Apopain|CASP-3|CC3|CPP-32|CPP32|Caspase-3|Lice|SCA-1|Yama|mldy	caspase 3	protein-coding
common_peak2-19936-20-10-1.0286431659539-1.30248952876293	chr1	127975977	127976565	+	0	NA	intron (NM_172484, intron 8 of 14)	intron (NM_172484, intron 8 of 14)	-167480	NM_145100	72585	Mm.490405	NM_145100		Lypd1	2700050C12Rik|AI853408|C530008O16Rik|Lynx2|Lypdc1	Ly6/Plaur domain containing 1	protein-coding
unique_peak1-2832-11-4-1.18676548936425-1.68134727924692	chr17	27932733	27933254	+	0	NA	intron (NM_001033279, intron 1 of 4)	B4A|SINE|B4	24494	NM_001033279	224647	Mm.196577	NM_001033279	ENSMUSG00000056692	D17Wsu92e	AU020189|C030010A15|C80239	DNA segment, Chr 17, Wayne State University 92, expressed	protein-coding
common_peak1-13673-41-28-0.843167709721088-1.8888294360187	chr2	28524774	28526141	+	0	NA	intron (NM_001289575, intron 8 of 22)	intron (NM_001289575, intron 8 of 22)	28704	NM_022887	64930	Mm.224354	NM_022887	ENSMUSG00000026812	Tsc1	-	tuberous sclerosis 1	protein-coding
common_peak1-18611-57-54-0.484673326554269-1.18246856546184	chr8	107292624	107294674	+	0	NA	Intergenic	Lx6|LINE|L1	-25488	NM_001002775	442809	Mm.444779	NM_001002775		4932416K20Rik	-	RIKEN cDNA 4932416K20 gene	protein-coding
unique_peak1-2719-8-1-2.00522241794757-2.05605744720049	chr16	92564727	92565250	+	0	NA	Intergenic	Intergenic	66596	NM_172469	209195	Mm.44747	NM_172469	ENSMUSG00000022949	Clic6	5730466J16Rik|AL022908|AW045520|CLIC1L	chloride intracellular channel 6	protein-coding
unique_peak2-34976-4-5--0.608423014574403-0.909929411522249	chr15	98772466	98772821	+	0	NA	Intergenic	Intergenic	-7822	NM_011654	22143	Mm.392113	NM_011654	ENSMUSG00000023004	Tuba1b	Tuba2	tubulin, alpha 1B	protein-coding
unique_peak2-33558-0-4--3.16205902536157-1.10720996964787	chr11	83461516	83461924	+	0	NA	3' UTR (NM_011337, exon 3 of 3)	3' UTR (NM_011337, exon 3 of 3)	1160	NM_011337	20302	Mm.1282	NM_011337	ENSMUSG00000000982	Ccl3	AI323804|G0S19-1|LD78alpha|MIP-1alpha|MIP1-(a)|MIP1-alpha|Mip1a|Scya3	chemokine (C-C motif) ligand 3	protein-coding
common_peak1-19124-74-49-1.07203038720388-4.8259426428424	chr9	77910443	77911787	+	0	NA	intron (NM_008103, intron 5 of 5)	intron (NM_008103, intron 5 of 5)	11350	NM_008103	14531	Mm.1400	NM_008103	ENSMUSG00000023333	Gcm1	GCMa|Gcm-rs2|Gcm1-rs1|glide	glial cells missing homolog 1 (Drosophila)	protein-coding
common_peak2-22786-41-40-0.343596700230576-0.641883003087205	chr14	7807694	7809419	+	0	NA	Intergenic	Intergenic	51407	NM_001164727	100038847	Mm.443041	NM_001164727	ENSMUSG00000093985	Gm10406	ENSMUSG00000072735	predicted gene 10406	protein-coding
unique_peak1-6750-28-8-1.88303411837915-3.85480160428389	chr8	47974436	47975484	+	0	NA	Intergenic	B4|SINE|B4	-97319	NM_177304	320981	Mm.211429	NM_177304	ENSMUSG00000038173	Enpp6	4833421B01Rik|B830047L21Rik|D8Ertd514e|E-NPP 6|Npp6	ectonucleotide pyrophosphatase/phosphodiesterase 6	protein-coding
common_peak1-12959-20-20-0.0957573618124323-0.321718508207528	chr19	55868719	55869580	+	0	NA	intron (NM_001142920, intron 4 of 11)	intron (NM_001142920, intron 4 of 11)	52849	NM_001142923	21416	Mm.139815	NM_009333	ENSMUSG00000024985	Tcf7l2	TCF4B|TCF4E|Tcf-4|Tcf4|mTcf-4B|mTcf-4E	transcription factor 7 like 2, T cell specific, HMG box	protein-coding
common_peak2-21906-12-9-0.326847890200276-0.459837087125828	chr12	8805499	8806074	+	0	NA	Intergenic	Intergenic	27584	NM_011519	20969	Mm.2580	NM_011519	ENSMUSG00000020592	Sdc1	AA408134|AA409076|CD138|Sstn|Synd|Synd1|syn-1	syndecan 1	protein-coding
unique_peak2-35194-7-36--2.41036253533076-4.9487525270151	chr16	58727819	58728656	+	0	NA	intron (NR_045517, intron 1 of 4)	CpG	214	NM_001252451	224250	Mm.29482	NM_171826	ENSMUSG00000022744	Cldn25	1110019C08Rik|AA407103|AI849195|AW489850|Cldnd1	claudin 25	protein-coding
unique_peak1-352-7-2-1.21412832957703-1.45399745587252	chr1	136178132	136178481	+	0	NA	Intergenic	B3|SINE|B2	-8275	NM_031189	17928	Mm.16528	NM_031189	ENSMUSG00000026459	Myog	MYF4|bHLHc3|myo	myogenin	protein-coding
common_peak1-7869-48-27-1.16357222917721-3.51718000375138	chr1	133417495	133419012	+	0	NA	intron (NM_001081011, intron 2 of 22)	intron (NM_001081011, intron 2 of 22)	5685	NM_001081011	14270	Mm.276259	NM_019520	ENSMUSG00000026425	Srgap2	9930124L22Rik|AI448945|FBP2|Fnbp2|srGAP3	SLIT-ROBO Rho GTPase activating protein 2	protein-coding
unique_peak2-36062-6-14--1.34149248522822-1.01572999746118	chr19	47886923	47887611	+	0	NA	intron (NM_027559, intron 7 of 37)	intron (NM_027559, intron 7 of 37)	24584	NM_027559	100048534	Mm.29457	NM_027559	ENSMUSG00000044948	Cfap43	4632415N18Rik|4930428C11Rik|4930463G05Rik|AI429486|D19Ertd652e|Wdr96	cilia and flagella associated protein 43	protein-coding
unique_peak1-3383-30-11-1.58471290877072-3.34305003325519	chr19	3839383	3840433	+	0	NA	Intergenic	Intergenic	-11865	NM_001271496	12660	Mm.225505	NM_013490	ENSMUSG00000024843	Chka	CK|CK/EK-alpha|Chetk-alpha|Chk|ChoK|EK|EtnK-alpha	choline kinase alpha	protein-coding
common_peak1-12067-18-21--0.146512467408946-0.306326795069975	chr17	23828498	23829248	+	0	NA	Intergenic	MERVL-int|LTR|ERVL	-7880	NM_020293	56863	Mm.491368	NM_020293	ENSMUSG00000066720	Cldn9	nmf329	claudin 9	protein-coding
unique_peak2-33201-5-8--0.874305337448166-1.10484139239135	chr10	111518670	111519313	+	0	NA	Intergenic	Intergenic	-1419	NM_026223	67537	Mm.292351	NM_026223	ENSMUSG00000020214	Glipr1l2	4921508O11Rik	GLI pathogenesis-related 1 like 2	protein-coding
unique_peak1-6539-12-6-0.841421063030034-1.58711810488664	chr7	126776935	126777486	+	0	NA	intron (NM_054094, intron 3 of 13)	intron (NM_054094, intron 3 of 13)	15868	NM_054094	117147	Mm.427560	NM_054094	ENSMUSG00000033533	Acsm1	Acas3|Bucs1|Macs	acyl-CoA synthetase medium-chain family member 1	protein-coding
common_peak1-11877-18-13-0.505564229170747-0.625923329873571	chr16	94536528	94537361	+	0	NA	Intergenic	RCHARR1|DNA|MER1_type	-13085	NM_133229	170765	Mm.42604	NM_133229	ENSMUSG00000022941	Ripply3	Dscr6	ripply3 homolog (zebrafish)	protein-coding
unique_peak2-32794-5-6--0.511735258063458-0.947717972411649	chr1	181257953	181258298	+	0	NA	intron (NM_027188, intron 5 of 11)	(GGGA)n|Simple_repeat|Simple_repeat	190009	NM_027188	69726	Mm.222338	NM_027188		Smyd3	2410008A19Rik|Zmynd1	SET and MYND domain containing 3	protein-coding
common_peak2-32352-14-25--0.801223557783447-0.84969927174089	chrX	94177846	94178504	+	0	NA	Intergenic	Lx9|LINE|L1	-89760	NM_001033361	245526	Mm.336164	NM_001033361	ENSMUSG00000031212	Pgr15l	-	G protein-coupled receptor 15-like	protein-coding
unique_peak1-1524-33-18-1.08341004908194-2.15925086250253	chr13	12813202	12814309	+	0	NA	Intergenic	Intergenic	-71093	NR_003568	664862	Mm.415635	NR_003568		Gpr137b-ps	2310041G17Rik|ENSMUSG00000075118	G protein-coupled receptor 137B, pseudogene	pseudo
unique_peak1-239-8-2-1.42025991722641-1.65811743852845	chr1	90503565	90504074	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	55727	NR_037971	100503197	Mm.99352	NR_037971		Gm19589	-	predicted gene, 19589	ncRNA
unique_peak1-3676-9-2-1.60465090568306-1.87199725847353	chr19	41837002	41837441	+	0	NA	Intergenic	B2_Mm1a|SINE|B2	15770	NR_040320	100502871	Mm.394485	NR_040320		Gm19424	-	predicted gene, 19424	ncRNA
common_peak2-24167-9-15--0.81038659359578-0.630231561310125	chr16	45158718	45159234	+	0	NA	promoter-TSS (NM_026402)	promoter-TSS (NM_026402)	34	NM_026402	67841	Mm.41775	NM_026402	ENSMUSG00000022663	Atg3	2610016C12Rik|APG3|Apg3l|Atg3l|PC3-96	autophagy related 3	protein-coding
common_peak2-26697-9-13--0.617741515653384-0.459837087125828	chr2	126996420	126996871	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-27452	NM_001163527	73338	Mm.57559	NM_001163527		Itpripl1	1700041B20Rik	inositol 1,4,5-triphosphate receptor interacting protein-like 1	protein-coding
unique_peak2-37892-6-8--0.60452689106201-1.03789460276074	chr5	140331757	140332261	+	0	NA	Intergenic	RMER15|LTR|ERVL	-29212	NM_025604	66506	Mm.29070	NM_025604	ENSMUSG00000029551	Psmg3	1810042K04Rik|4930403H09Rik|AI303239	proteasome (prosome, macropain) assembly chaperone 3	protein-coding
common_peak2-21374-11-15--0.491306415748387-0.435191258261915	chr11	78511472	78512127	+	0	NA	promoter-TSS (NM_008702)	promoter-TSS (NM_008702)	-872	NM_008702	18099	Mm.9001	NM_008702	ENSMUSG00000017376	Nlk	AI194375	nemo like kinase	protein-coding
unique_peak1-110-11-5-0.923731083530457-1.477227296591	chr1	58027740	58028288	+	0	NA	Intergenic	MER58B|DNA|MER1_type	-1086	NM_001159865	51960	Mm.339711	NM_030211	ENSMUSG00000054770	Kctd18	4932411A20Rik|6530404F10Rik	potassium channel tetramerisation domain containing 18	protein-coding
common_peak2-31312-14-30--1.05498015002923-1.40782320807776	chr8	78820597	78821378	+	0	NA	Intergenic	RMER15|LTR|ERVL	603085	NR_028579	100039211	Mm.367571	NR_028579	ENSMUSG00000074235	Gm10649	ENSMUSG00000074235	predicted gene 10649	ncRNA
unique_peak1-4687-8-2-1.42025991722641-1.65811743852845	chr3	96057295	96057843	+	0	NA	Intergenic	RLTR33|LTR|ERVK	6946	NM_054045	97114	Mm.358797	NM_054045	ENSMUSG00000081058	Hist2h3c2	H3-614|H3.2-614|Hist2h3c2-ps|Hist2h3ca1|M32461	histone cluster 2, H3c2	protein-coding
unique_peak2-33370-3-7--1.41398308995928-1.23214870625617	chr11	35839039	35839459	+	0	NA	intron (NM_001290702, intron 25 of 27)	intron (NM_001290702, intron 25 of 27)	-45658	NM_170779	211652	Mm.31267	NM_170779		Wwc1	AA408228|AU017197|BC037006|Kibra|mKIAA0869	WW, C2 and coiled-coil domain containing 1	protein-coding
unique_peak2-34142-4-11--1.6084230145744-1.68134727924692	chr13	23685074	23685581	+	0	NA	intron (NM_001177653, intron 1 of 1)	intron (NM_001177653, intron 1 of 1)	-7488	NM_001290530	319179	Mm.440391	NM_178194	ENSMUSG00000047246	Hist1h2be	-	histone cluster 1, H2be	protein-coding
common_peak2-23014-14-18--0.348711353085941-0.360333814299795	chr14	62991495	62992247	+	0	NA	TTS (NM_026001)	TTS (NM_026001)	40929	NM_026001	67153	Mm.26040	NM_026001	ENSMUSG00000021932	Rnaseh2b	1110019N06Rik|2610207P08Rik|Dleu8	ribonuclease H2, subunit B	protein-coding
common_peak1-11901-10-11--0.228547155712387-0.31137425193576	chr17	15564429	15564889	+	0	NA	intron (NR_033586, intron 9 of 10)	intron (NR_033586, intron 9 of 10)	31449	NM_024203	67544	Mm.35039	NM_024203	ENSMUSG00000014763	Fam120b	4932442K08Rik|AW049283|AW413338|CCPG|Pgcc1|mKIAA1838	family with sequence similarity 120, member B	protein-coding
common_peak1-12069-23-10-1.26233588587178-1.90052685918624	chr17	24007493	24008255	+	0	NA	intron (NM_020487, intron 4 of 5)	B1_Mur4|SINE|Alu	2835	NM_020487	57256	Mm.386785	NM_020487	ENSMUSG00000024116	Prss21	1700023E12Rik|TESP5|mT4|testisin	protease, serine 21	protein-coding
unique_peak1-2919-17-1-3.21829633820504-4.59734841376773	chr17	47989916	47990647	+	0	NA	Intergenic	(TCC)n|Simple_repeat|Simple_repeat	-18641	NM_001109973	17240	Mm.329100	NM_010783	ENSMUSG00000032717	Mdfi	I-mf|I-mfa	MyoD family inhibitor	protein-coding
common_peak2-29464-41-54--0.0802110086759997-0.30922471743021	chr6	29608927	29610257	+	0	NA	Intergenic	Intergenic	-34664	NM_146173	232670	Mm.225289	NM_146173	ENSMUSG00000001763	Tspan33	1300010A20Rik|Pen	tetraspanin 33	protein-coding
unique_peak2-37183-1-8--2.79698201165906-2.05605744720049	chr4	54948663	54948952	+	0	NA	Intergenic	Intergenic	-12010	NM_172867	242466	Mm.102904	NM_172867	ENSMUSG00000060206	Zfp462	6030417H05|9430078C22Rik|Gt4-2|Zfpip	zinc finger protein 462	protein-coding
unique_peak2-36287-5-5--0.289342836727009-0.909929411522249	chr2	69635232	69635623	+	0	NA	TTS (NM_028521)	TTS (NM_028521)	7633	NM_028521	73373	Mm.9621	NM_028521	ENSMUSG00000027088	Phospho2	1700048E23Rik|AI661517|AU021728|AV006103|Phos2	phosphatase, orphan 2	protein-coding
unique_peak1-4690-10-5-0.771452844287613-1.33892459842472	chr3	96551474	96551914	+	0	NA	intron (NM_026406, intron 1 of 8)	B2_Mm2|SINE|B2	20160	NM_026406	67845	Mm.386792	NM_026406	ENSMUSG00000028098	Rnf115	2610028E05Rik|AU042696|Zfp364	ring finger protein 115	protein-coding
common_peak2-31840-28-30-0.0987628094345876-0.332062764479303	chr9	45496044	45497105	+	0	NA	intron (NM_001081270, intron 11 of 32)	intron (NM_001081270, intron 11 of 32)	140147	NM_001081373	214552	Mm.260103	NM_172531	ENSMUSG00000043987	Cep164	AI450905|BC027092|D030051D21|mKIAA1052	centrosomal protein 164	protein-coding
common_peak1-7894-36-57--0.378659908959817-0.608301926896957	chr1	135146354	135147590	+	0	NA	non-coding (NR_037984, exon 4 of 4)	non-coding (NR_037984, exon 4 of 4)	4298	NM_182930	240753	Mm.253559	NM_182930	ENSMUSG00000041757	Plekha6	9530028L01Rik|AU042621|Pepp3	pleckstrin homology domain containing, family A member 6	protein-coding
unique_peak2-33611-3-7--1.41398308995928-1.23214870625617	chr11	94936838	94937219	+	0	NA	intron (NM_013565, intron 1 of 25)	intron (NM_013565, intron 1 of 25)	1000	NM_013565	16400	Mm.57035	NM_013565	ENSMUSG00000001507	Itga3	AA407068|CD49C|GAPB3	integrin alpha 3	protein-coding
common_peak2-24254-11-28--1.34928741087596-1.9654245668484	chr16	92609350	92610260	+	0	NA	intron (NM_001111022, intron 6 of 6)	intron (NM_001111022, intron 6 of 6)	87769	NM_001111023	12394	Mm.4081	NM_009821	ENSMUSG00000022952	Runx1	AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b	runt related transcription factor 1	protein-coding
common_peak1-7550-24-30--0.160986407619158-0.316008636696545	chr1	37719347	37720321	+	0	NA	intron (NM_028096, intron 1 of 9)	intron (NM_028096, intron 1 of 9)	56822	NM_028096	72097	Mm.142607	NM_028096	ENSMUSG00000026090	2010300C02Rik	-	RIKEN cDNA 2010300C02 gene	protein-coding
unique_peak1-672-16-4-1.7963355473807-2.18192634393779	chr10	67025433	67026150	+	0	NA	Intergenic	L1MC1|LINE|L1	-14088	NM_001005419	211488	Mm.297250	NM_001005419	ENSMUSG00000057134	Ado	Gm237	2-aminoethanethiol (cysteamine) dioxygenase	protein-coding
common_peak1-15120-18-10-0.853487532591054-1.03889213727317	chr3	138053853	138054687	+	0	NA	Intergenic	L1_Mus1|LINE|L1	17185	NR_033581	639769	Mm.484043	NR_033581	ENSMUSG00000090306	Adh6-ps1	1300002P07Rik|Adh5ps|Gm7277	alcohol dehydrogenase 6 (class V), pseudogene 1	pseudo
unique_peak2-32760-1-7--2.62705701021674-1.80617997398389	chr1	170947065	170947333	+	0	NA	Intergenic	L1M5|LINE|L1	514396	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
common_peak2-22464-55-119--0.702270724455817-2.60049418611543	chr13	45962942	45964997	+	0	NA	intron (NM_009124, intron 2 of 7)	RSINE1|SINE|B4	96391	NM_001199304	20238	Mm.342683	NM_009124	ENSMUSG00000046876	Atxn1	2900016G23Rik|Atx1|C85907|ENSMUSG00000074917|Gm10786|Sca1	ataxin 1	protein-coding
common_peak1-8224-10-12--0.344024373132323-0.340565874754526	chr10	11149332	11149840	+	0	NA	intron (NM_010146, intron 2 of 3)	intron (NM_010146, intron 2 of 3)	86343	NM_010146	13853	Mm.89946	NM_010146		Epm2a	TG-B|Tg(TcraK,TcrbK)TG-BFlv	epilepsy, progressive myoclonic epilepsy, type 2 gene alpha	protein-coding
common_peak1-15036-16-14-0.211373046659543-0.364171515310935	chr3	121671936	121672693	+	0	NA	intron (NM_172525, intron 1 of 22)	intron (NM_172525, intron 1 of 22)	16070	NM_172525	214137	Mm.229287	NM_172525	ENSMUSG00000039831	Arhgap29	6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1	Rho GTPase activating protein 29	protein-coding
unique_peak2-39697-1-9--2.94898510510411-2.31132995230379	chr9	110999301	110999785	+	0	NA	Intergenic	Intergenic	-21072	NM_027742	71268	Mm.302287	NM_027742	ENSMUSG00000032497	Lrrfip2	5133400F20Rik|AI850587	leucine rich repeat (in FLII) interacting protein 2	protein-coding
unique_peak2-37595-11-21--0.950738034385684-0.991115276827166	chr5	47982663	47983620	+	0	NA	Intergenic	RMER1B|Other|Other	-391253	NR_111900	20563	Mm.289739	NM_178804		Slit2	Drad-1|E030015M03Rik|E130320P19Rik|Slil3|mKIAA4141|slit-2	slit homolog 2 (Drosophila)	protein-coding
common_peak2-25703-58-31-1.2959499348905-5.00588687210447	chr19	20389847	20390919	+	0	NA	Intergenic	L1Md_F2|LINE|L1	74778	NM_010730	16952	Mm.248360	NM_010730	ENSMUSG00000024659	Anxa1	Anx-1|Anx-A1|C430014K04Rik|Lpc-1|Lpc1	annexin A1	protein-coding
unique_peak2-34281-0-7--3.84013093047421-1.80617997398389	chr13	69535702	69536035	+	0	NA	Intergenic	Lx3_Mus|LINE|L1	136874	NM_198600	210106	Mm.315959	NM_198600	ENSMUSG00000034575	Papd7	LAK-1|POLK|Pols|TRF4|TRF4-1	PAP associated domain containing 7	protein-coding
unique_peak2-39834-4-8--1.19338551529556-1.21878474469819	chrX	48695108	48695521	+	0	NA	Intergenic	L1Md_F3|LINE|L1	-136305	NM_134163	171170	Mm.295324	NM_134163		Mbnl3	A530038J18Rik|AI661274|CHCR|E430034C16Rik|MBLX|MBLX39|MBXL	muscleblind-like 3 (Drosophila)	protein-coding
common_peak1-13923-10-19--0.965512749878593-0.917676348953458	chr2	84649645	84650079	+	0	NA	3' UTR (NM_019949, exon 4 of 4)	3' UTR (NM_019949, exon 4 of 4)	10877	NM_019949	56791	Mm.38261	NM_019949	ENSMUSG00000027078	Ube2l6	2810489I21Rik|RIG-B|UBCH8|Ubce8|Ubcm8	ubiquitin-conjugating enzyme E2L 6	protein-coding
common_peak1-10423-20-34--0.641208232353773-0.863762398024911	chr13	100103516	100104269	+	0	NA	intron (NM_026873, intron 4 of 9)	intron (NM_026873, intron 4 of 9)	10741	NM_026873	68927	Mm.276502	NM_026873	ENSMUSG00000021650	Ptcd2	1190005P08Rik	pentatricopeptide repeat domain 2	protein-coding
common_peak2-24587-22-32--0.397110014271049-0.488172498216822	chr17	31855076	31855873	+	0	NA	Intergenic	ORR1A2|LTR|MaLR	40598	NM_001278570	12954	Mm.1228	NM_013501	ENSMUSG00000024041	Cryaa	Acry-1|Crya-1|Crya1|DAcry-1|lop18	crystallin, alpha A	protein-coding
unique_peak1-6483-7-4-0.477162735410827-1.09384600808989	chr7	112288414	112288940	+	0	NA	Intergenic	Intergenic	4146	NM_147045	259047	Mm.223428	NM_147045	ENSMUSG00000044120	Olfr683	MOR40-1	olfactory receptor 683	protein-coding
common_peak1-14615-24-32--0.251184216590737-0.358978896303361	chr3	52195737	52196680	+	0	NA	Intergenic	Intergenic	123949	NM_019739	56458	Mm.29891	NM_019739	ENSMUSG00000044167	Foxo1	AI876417|Afxh|FKHR|Fkhr1|Foxo1a	forkhead box O1	protein-coding
common_peak1-8312-9-20--1.20270401637454-1.23014042908325	chr10	40883458	40884067	+	0	NA	Intergenic	(TTC)n|Simple_repeat|Simple_repeat	-92372	NM_199058	140741	Mm.290693	NM_199058	ENSMUSG00000046922	Gpr6	AI852874|Gm233	G protein-coupled receptor 6	protein-coding
unique_peak2-39620-7-10--0.660340788339108-1.12966497611638	chr9	90270389	90270877	+	0	NA	Intergenic	L1Md_F3|LINE|L1	-105026	NM_194334	67016	Mm.335347	NM_194334	ENSMUSG00000037410	Tbc1d2b	1810061M12Rik|AI480956|AV021536|AV023399|AW491493|mKIAA1055	TBC1 domain family, member 2B	protein-coding
common_peak2-29958-16-37--1.12966387117552-1.94848218498813	chr6	118138601	118139316	+	0	NA	intron (NM_001080780, intron 1 of 18)	intron (NM_001080780, intron 1 of 18)	8804	NM_009050	19713	Mm.57199	NM_009050	ENSMUSG00000030110	Ret	PTC|RET51|RET9|c-Ret	ret proto-oncogene	protein-coding
unique_peak1-6085-7-0-2.79909083029819-2.40823996531185	chr6	122731159	122731643	+	0	NA	Intergenic	Intergenic	-38638	NM_011401	20527	Mm.395108	NM_011401	ENSMUSG00000003153	Slc2a3	AA408729|AL023014|AL024341|AU040424|C78366|Glut-3|Glut3	solute carrier family 2 (facilitated glucose transporter), member 3	protein-coding
common_peak2-31293-17-25--0.482143379936054-0.479250674391597	chr8	72723217	72723975	+	0	NA	intron (NM_001007570, intron 1 of 7)	intron (NM_001007570, intron 1 of 7)	12584	NM_001007570	73095	Mm.185413	NM_001007570	ENSMUSG00000002346	Slc25a42	2900084M01Rik	solute carrier family 25, member 42	protein-coding
unique_peak1-1420-8-1-2.00522241794757-2.05605744720049	chr12	80236840	80237253	+	0	NA	intron (NM_009705, intron 2 of 7)	intron (NM_009705, intron 2 of 7)	5271	NM_009705	11847	Mm.3506	NM_009705	ENSMUSG00000021125	Arg2	AII|AU022422	arginase type II	protein-coding
common_peak1-18998-64-77-0.180044182846355-0.460389472422342	chr9	59035480	59037367	+	0	NA	Intergenic	Intergenic	-102956	NM_028121	72141	Mm.22456	NM_028121	ENSMUSG00000025236	Adpgk	2610017G09Rik|Adp-gk|C77577	ADP-dependent glucokinase	protein-coding
common_peak2-20660-52-63-0.108259990265699-0.360272380583625	chr10	82857975	82859974	+	0	NA	Intergenic	L1_Mus1|LINE|L1	36008	NM_026579	28109	Mm.196210	NM_026579	ENSMUSG00000020255	D10Wsu102e	AI747614|C430041I18Rik	DNA segment, Chr 10, Wayne State University 102, expressed	protein-coding
unique_peak1-6249-8-0-3.00522241794757-2.70926996097583	chr7	19324506	19325058	+	0	NA	Intergenic	Intergenic	21343	NM_001004152	243862	Mm.389833	NM_001004152	ENSMUSG00000044903	Psg22	AA408604|cea9	pregnancy-specific glycoprotein 22	protein-coding
unique_peak2-34820-4-13--1.83081543591085-2.04196296489515	chr15	74954310	74954955	+	0	NA	Intergenic	MERVL-int|LTR|ERVL	-12253	NM_001099217	100041546	Mm.482110	NM_001099217	ENSMUSG00000022584	Ly6c2	Ly-6C.2|Ly-6C2	lymphocyte antigen 6 complex, locus C2	protein-coding
unique_peak1-5770-10-0-3.35641534500877-3.31132995230379	chr6	53616253	53616745	+	0	NA	intron (NM_172728, intron 3 of 6)	intron (NM_172728, intron 3 of 6)	93131	NM_172728	231991	Mm.321138	NM_172728	ENSMUSG00000053007	Creb5	Crebpa|D430026C09Rik	cAMP responsive element binding protein 5	protein-coding
common_peak1-16207-10-16--0.73104749624157-0.604422558181019	chr5	93295621	93296186	+	0	NA	intron (NM_001077595, intron 1 of 9)	intron (NM_001077595, intron 1 of 9)	-31116	NM_001077596	27428	Mm.46014	NM_015756	ENSMUSG00000029381	Shroom3	AL022960|D5Ertd287e|Shrm|Shrm3	shroom family member 3	protein-coding
common_peak1-17098-169-226-0.321459491855578-1.73645379501831	chr6	113075911	113078657	+	0	NA	intron (NM_028385, intron 15 of 21)	(TA)n|Simple_repeat|Simple_repeat	49651	NM_028385	72895	Mm.367159	NM_028385	ENSMUSG00000034269	Setd5	2900045N06Rik|C330007C20|C85544|mKIAA1757	SET domain containing 5	protein-coding
common_peak1-18301-33-31-0.331337562525529-0.549429090733244	chr8	45999852	46000922	+	0	NA	Intergenic	L1_Mm|LINE|L1	-35175	NM_001081286	14107	Mm.27365	NM_001081286	ENSMUSG00000070047	Fat1	2310038E12Rik|AU023433|Fath|mFat1	FAT tumor suppressor homolog 1 (Drosophila)	protein-coding
unique_peak1-1430-10-8-0.186490343566457-1.078512453669	chr12	85455529	85456229	+	0	NA	intron (NM_028821, intron 1 of 7)	intron (NM_028821, intron 1 of 7)	601	NM_028821	105000	Mm.101525	NM_028821	ENSMUSG00000042523	Dnal1	1700010H15Rik|AW121714|Dnalc1|E330027P08Rik	dynein, axonemal, light chain 1	protein-coding
unique_peak1-4803-11-3-1.50869358425161-1.95434855131066	chr3	135825930	135826378	+	0	NA	intron (NM_001033350, intron 7 of 16)	MTD|LTR|MaLR	162856	NM_001033350	242248	Mm.30832	NM_001033350	ENSMUSG00000037922	Bank1	A530094C12Rik|AI451642|AVIEF|BANK	B cell scaffold protein with ankyrin repeats 1	protein-coding
common_peak2-24994-43-35-0.612638184081391-1.27423323032613	chr18	11050042	11051152	+	0	NA	intron (NR_105022, intron 3 of 3)	intron (NR_105022, intron 3 of 3)	-1911	NM_010258	14465	Mm.329287	NM_010258	ENSMUSG00000005836	Gata6	AA410133|GATA-6	GATA binding protein 6	protein-coding
common_peak2-26345-11-8-0.338768582809301-1.14218153353838	chr2	35595411	35595894	+	0	NA	Intergenic	Intergenic	43400	NM_001290639	69601	Mm.29629	NM_001001602	ENSMUSG00000026883	Dab2ip	2310011D08Rik|AI480459|Aip1|mKIAA1743	disabled 2 interacting protein	protein-coding
common_peak1-14519-20-15-0.488074784591193-0.590343908676236	chr3	27689628	27690470	+	0	NA	Intergenic	Intergenic	-80688	NM_173182	72007	Mm.38832	NM_173182	ENSMUSG00000039286	Fndc3b	1600019O04Rik|AW550168|Fad104|mKIAA4164	fibronectin type III domain containing 3B	protein-coding
common_peak2-29651-68-52-0.842040324735097-3.07270752173745	chr6	67266942	67267872	+	0	NA	intron (NM_008354, intron 8 of 15)	intron (NM_008354, intron 8 of 15)	50434	NM_025814	66870	Mm.240490	NM_025814	ENSMUSG00000036371	Serbp1	1200009K13Rik|9330147J08Rik|AL022786|Pairbp1	serpine1 mRNA binding protein 1	protein-coding
unique_peak2-36673-11-22--1.0148683718054-1.11267835143409	chr3	30855639	30856538	+	0	NA	intron (NM_153421, intron 4 of 14)	B1_Mus2|SINE|Alu	12249	NM_001165954	241915	Mm.233173	NM_153421	ENSMUSG00000037652	Phc3	E030046K01Rik|Edr3|Hph3	polyhomeotic-like 3 (Drosophila)	protein-coding
common_peak2-24068-27-13-1.18419102883763-2.09887956687855	chr16	30396894	30397506	+	0	NA	Intergenic	Intergenic	-8584	NM_001128096	224088	Mm.8924	NM_001128094	ENSMUSG00000022533	Atp13a3	AU022875|Gm1745|Gm541|Gm542	ATPase type 13A3	protein-coding
unique_peak2-35859-5-7--0.704380336005853-1.01466476204226	chr18	76028417	76028801	+	0	NA	intron (NM_145356, intron 1 of 4)	L1MDa|LINE|L1	48777	NM_145356	207259	Mm.159332	NM_145356	ENSMUSG00000044646	Zbtb7c	B230208J24Rik|Kr-pok|Zbtb36	zinc finger and BTB domain containing 7C	protein-coding
unique_peak1-4878-16-3-2.11826364226806-2.65002542325363	chr4	26345981	26346723	+	0	NA	Intergenic	ORR1A2|LTR|MaLR	-72553	NM_172865	242362	Mm.245602	NM_172865	ENSMUSG00000040520	Manea	4932703L02Rik	mannosidase, endo-alpha	protein-coding
common_peak2-23079-48-44-0.47907405490514-1.03754770036046	chr14	75834349	75835553	+	0	NA	Intergenic	(TA)n|Simple_repeat|Simple_repeat	-20838	NM_001128093	380918	Mm.484360	NM_001128093	ENSMUSG00000091722	Siah3	Gm912	seven in absentia homolog 3 (Drosophila)	protein-coding
common_peak2-23751-9-6-0.382258484346616-1.11707584880836	chr15	97832045	97832401	+	0	NA	intron (NM_031163, intron 1 of 53)	intron (NM_031163, intron 1 of 53)	2932	NM_031163	12824	Mm.2423	NM_031163	ENSMUSG00000022483	Col2a1	Col2|Col2a|Col2a-1|Del1|Dmm|Lpk|M100856|Rgsc856	collagen, type II, alpha 1	protein-coding
unique_peak2-39810-6-12--1.13504160776079-1.45089835786865	chrX	35930264	35930821	+	0	NA	Intergenic	PB1D10|SINE|Alu	-1169	NM_001110142	72584	Mm.327675	NM_028288		Cul4b	2700050M05Rik|AA409770|CUL-4B|mKIAA0695	cullin 4B	protein-coding
common_peak2-27304-53-96--0.458939829771199-1.11676972075534	chr3	62506470	62507139	+	0	NA	Intergenic	Intergenic	-97742	NM_177346	229357	Mm.95181	NM_177346		Gpr149	9630018L10Rik|Ieda|PGR10|R35	G protein-coupled receptor 149	protein-coding
common_peak2-28452-10-6-0.549060422951165-1.21398586181642	chr4	150807989	150808409	+	0	NA	intron (NM_001081557, intron 5 of 23)	ORR1E|LTR|MaLR	-376137	NM_009498	22319	Mm.273930	NM_009498	ENSMUSG00000028955	Vamp3	D130027G05Rik|VAMP-3|ceb	vesicle-associated membrane protein 3	protein-coding
common_peak2-28657-14-29--1.00767443525087-1.28534286439185	chr5	31201544	31202535	+	0	NA	intron (NM_001048192, intron 12 of 16)	ID_B1|SINE|B4	8122	NM_001134692	67695	Mm.21450	NM_024460	ENSMUSG00000038803	Ost4	2310016E02Rik	oligosaccharyltransferase 4 homolog (S. cerevisiae)	protein-coding
common_peak1-16792-34-24-0.738212337226542-1.3806499615138	chr6	41249514	41250839	+	0	NA	Intergenic	RMER1A|Other|Other	-2095	NM_011646	22074	Mm.383263	NM_011646	ENSMUSG00000054106	Try4	0910001B19Rik|Td	trypsin 4	protein-coding
unique_peak1-6701-6-2-0.980435609659146-1.26211192963361	chr8	34055987	34056332	+	0	NA	intron (NM_001177589, intron 1 of 3)	Lx7|LINE|L1	4339	NM_001177589	100042715	Mm.291093	NM_001177589		Gm3985	-	predicted gene 3985	protein-coding
unique_peak1-5063-7-4-0.477162735410827-1.09384600808989	chr4	137485928	137486326	+	0	NA	intron (NM_199307, intron 5 of 19)	intron (NM_199307, intron 5 of 19)	-63244	NM_001256198	230861	Mm.268903	NM_172703	ENSMUSG00000028760	Eif4g3	1500002J22Rik|4833436O05|4930523M17Rik|G1-419-52|eIF4GII|repro8	eukaryotic translation initiation factor 4 gamma, 3	protein-coding
unique_peak1-2976-10-4-1.03448725012141-1.5150158574804	chr17	75270199	75270667	+	0	NA	Intergenic	Intergenic	-134436	NM_019919	268977	Mm.269747	NM_019919	ENSMUSG00000001870	Ltbp1	9430031G15Rik|9830146M04|Ltbp-1|Tgfb|b2b1000Clo	latent transforming growth factor beta binding protein 1	protein-coding
unique_peak2-32845-5-5--0.289342836727009-0.909929411522249	chr1	193422847	193423276	+	0	NA	intron (NM_178632, intron 7 of 19)	intron (NM_178632, intron 7 of 19)	23448	NM_178632	77065	Mm.338175	NM_178632	ENSMUSG00000037461	Ints7	5930412E23Rik	integrator complex subunit 7	protein-coding
common_peak1-13733-21-19-0.247561170378873-0.427564438475253	chr2	32288072	32288920	+	0	NA	intron (NM_001164357, intron 1 of 9)	intron (NM_001164357, intron 1 of 9)	-1825	NM_001164358	227731	Mm.37395	NM_146118	ENSMUSG00000026819	Slc25a25	1110030N17Rik|MCSC|mKIAA1896	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25	protein-coding
common_peak2-22175-11-7-0.508693584251613-1.21681515183528	chr12	101876846	101877208	+	0	NA	intron (NM_153587, intron 3 of 17)	Lx8|LINE|L1	86211	NM_153587	73086	Mm.220417	NM_153587	ENSMUSG00000021180	Rps6ka5	3110005L17Rik|6330404E13Rik|AI854034|MSK1|MSPK1|RLPK	ribosomal protein S6 kinase, polypeptide 5	protein-coding
common_peak2-25079-45-43-0.400926406707574-0.786568022251753	chr18	35598521	35599213	+	0	NA	intron (NM_030749, intron 1 of 9)	intron (NM_030749, intron 1 of 9)	59712	NM_030749	81500	Mm.291482	NM_030749	ENSMUSG00000024357	Sil1	1810057E01Rik|AI042831|wz	endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)	protein-coding
common_peak1-9656-26-30--0.0262972182284127-0.301029995663988	chr12	111574323	111575488	+	0	NA	Intergenic	MTB|LTR|MaLR	57465	NM_172119	107585	Mm.154427	NM_172119	ENSMUSG00000075707	Dio3	-	deiodinase, iodothyronine type III	protein-coding
common_peak1-15225-15-10-0.552733131918359-0.604422558181019	chr4	149307109	149307665	+	0	NA	intron (NM_029035, intron 1 of 2)	intron (NM_029035, intron 1 of 2)	21728	NM_029035	74646	Mm.30	NM_029035	ENSMUSG00000039911	Spsb1	1110014L01Rik|4930422J18Rik|AI596360|AI854583|SSB-1|SSB1	splA/ryanodine receptor domain and SOCS box containing 1	protein-coding
common_peak2-20242-21-8-1.39956426382392-2.11898024768848	chr1	183221095	183221543	+	0	NA	Intergenic	Intergenic	-61440	NM_028408	72978	Mm.338083	NM_028408	ENSMUSG00000026514	Cnih3	2900075G08Rik|CNIH-3	cornichon homolog 3 (Drosophila)	protein-coding
common_peak2-25450-11-7-0.508693584251613-1.21681515183528	chr19	4136527	4136922	+	0	NA	intron (NM_144532, intron 4 of 5)	ID_B1|SINE|B4	2885	NM_144532	73660	Mm.379226	NM_144532	ENSMUSG00000024842	Cabp4	2410038D05Rik	calcium binding protein 4	protein-coding
unique_peak1-4079-8-3-1.00522241794757-1.39487600375387	chr2	70660836	70661270	+	0	NA	intron (NM_172664, intron 1 of 19)	intron (NM_172664, intron 1 of 19)	2484	NM_172664	228012	Mm.136511	NM_172664	ENSMUSG00000041997	Tlk1	4930545J15Rik	tousled-like kinase 1	protein-coding
unique_peak1-6545-8-4-0.683294323060208-1.21878474469819	chr7	127007543	127008049	+	0	NA	intron (NM_001163703, intron 1 of 2)	intron (NM_001163703, intron 1 of 2)	31176	NM_173408	233805	Mm.31539	NM_173408	ENSMUSG00000048787	Dcun1d3	1700020A13Rik|BC030335	DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)	protein-coding
unique_peak1-7268-9-3-1.18961340640422-1.57096726280955	chr9	96196917	96197416	+	0	NA	intron (NM_178667, intron 8 of 13)	intron (NM_178667, intron 8 of 13)	37499	NM_001184710	211586	Mm.17977	NM_178667	ENSMUSG00000032411	Tfdp2	1110029I05Rik|A330080J22Rik|DP-3|DP3	transcription factor Dp 2	protein-coding
common_peak2-23954-12-6-0.841421063030034-1.58711810488664	chr16	15252008	15252469	+	0	NA	Intergenic	Intergenic	342373	NM_001159351	70620	Mm.235407	NM_023585		Ube2v2	1110021H13Rik|4632410D19Rik|5730524P06Rik|6820402M05|AI848315|C81524|MMS2	ubiquitin-conjugating enzyme E2 variant 2	protein-coding
unique_peak2-38027-3-5--0.998945590680433-0.96108193396963	chr6	37723035	37723448	+	0	NA	Intergenic	RLTR23|LTR|ERV1	-97570	NM_001272064	21848	Mm.41063	NM_145076		Trim24	A130082H20Rik|AI447469|D430004I05Rik|TIF1|TIF1-alpha|TIF1alpha|Tif1a	tripartite motif-containing 24	protein-coding
common_peak1-15444-39-93--0.938827604758484-3.31086661446844	chr4	95052439	95053522	+	0	NA	Intergenic	Intergenic	-171218	NM_001113412	75578	Mm.276098	NM_029347	ENSMUSG00000028573	Fggy	2310009E04Rik	FGGY carbohydrate kinase domain containing	protein-coding
common_peak2-25327-51-25-1.37448410746148-4.62282147871545	chr18	75901651	75902798	+	0	NA	Intergenic	Lx8|LINE|L1	-44874	NM_201354	269037	Mm.36745	NM_201354	ENSMUSG00000052928	Ctif	Gm672	CBP80/20-dependent translation initiation factor	protein-coding
unique_peak1-311-19-8-1.23276232521937-1.61268301619756	chr1	130740693	130741592	+	0	NA	Intergenic	B4|SINE|B4	-252266	NM_009911	12767	Mm.1401	NM_009911	ENSMUSG00000045382	Cxcr4	CD184|Cmkar4|LESTR|PB-CKR|PBSF/SDF-1|Sdf1r|b2b220Clo	chemokine (C-X-C motif) receptor 4	protein-coding
common_peak2-30437-15-11-0.4272022498345-0.503257505534083	chr7	44849911	44850440	+	0	NA	Intergenic	Intergenic	1669729	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak2-35390-3-7--1.41398308995928-1.23214870625617	chr17	30471028	30471434	+	0	NA	exon (NM_027060, exon 7 of 11)	exon (NM_027060, exon 7 of 11)	61894	NR_030688	623169	Mm.440508	NR_030688		Gm6402	EG623169	ribosomal protein S17 pseudogene	pseudo
unique_peak2-33496-18-16-0.225456309978012-0.397739447719379	chr11	72468728	72469562	+	0	NA	intron (NM_025985, intron 1 of 5)	intron (NM_025985, intron 1 of 5)	-34359	NM_009671	11736	Mm.10313	NM_009671	ENSMUSG00000020790	Ankfy1	Ankhzn|ZFYVE14|mKIAA1255	ankyrin repeat and FYVE domain containing 1	protein-coding
common_peak2-25659-8-7-0.00522241794757061-1.00793137938329	chr19	10296262	10296641	+	0	NA	intron (NM_001033481, intron 7 of 25)	intron (NM_001033481, intron 7 of 25)	15928	NM_001163431	69038	Mm.375100	NM_026919	ENSMUSG00000036372	Tmem258	1810006K21Rik	transmembrane protein 258	protein-coding
common_peak1-14830-7-11--0.785871670422967-1.21681515183528	chr3	90615237	90615540	+	0	NA	Intergenic	Intergenic	84560	NM_207263	384997	Mm.316644	NM_207263	ENSMUSG00000042250	Pglyrp4	Gm1478|Gm413	peptidoglycan recognition protein 4	protein-coding
common_peak1-17321-42-33-0.654866486616845-1.41268768702114	chr6	145746043	145747414	+	0	NA	Intergenic	Intergenic	-10175	NM_027760	71323	Mm.158669	NM_027760	ENSMUSG00000030259	Rassf8	5133400D11Rik|AA815821|AW123240|Hoj1|mHoj-1	Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	protein-coding
common_peak2-26818-15-15-0.0121647505556561-0.30803596071496	chr2	151973708	151974357	+	0	NA	intron (NM_009328, intron 1 of 1)	B1F2|SINE|Alu	4687	NM_009328	21407	Mm.3881	NM_009328	ENSMUSG00000068079	Tcf15	Meso1|bHLH-EC2	transcription factor 15	protein-coding
unique_peak2-37111-7-8--0.370834171144123-1.00793137938329	chr4	3199953	3200410	+	0	NA	Intergenic	MIR|SINE|MIR	-87729	NM_001167535	100312471	Mm.377218	NM_001167535	ENSMUSG00000095982	Vmn1r3	Gm11778|OTTMUSG00000004181	vomeronasal 1 receptor 3	protein-coding
common_peak2-23563-13-9-0.456543935750406-0.53895475198017	chr15	79357764	79358353	+	0	NA	TTS (NM_199080)	TTS (NM_199080)	5289	NM_152806	67040	Mm.29644	NM_152806	ENSMUSG00000055065	Ddx17	2610007K22Rik|A430025E01Rik|AI047725|C80929|Gm926|p72	DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	protein-coding
unique_peak2-33938-6-11--1.01956439034085-1.32595962126035	chr12	73907216	73907812	+	0	NA	Intergenic	MYSERV-int|LTR|ERVK	45316	NM_008910	19042	Mm.261045	NM_008910	ENSMUSG00000021096	Ppm1a	2310003C21Rik|2900017D14Rik|AI427932|AU017636|MMPa-2|MPPa-1	protein phosphatase 1A, magnesium dependent, alpha isoform	protein-coding
unique_peak1-4761-7-1-1.79909083029819-1.80617997398389	chr3	121859040	121859409	+	0	NA	intron (NM_007378, intron 37 of 49)	intron (NM_007378, intron 37 of 49)	-89251	NM_008129	14630	Mm.292676	NM_008129		Gclm	AI649393|Gcmc|Glclr	glutamate-cysteine ligase, modifier subunit	protein-coding
unique_peak2-34899-4-9--1.34538860874061-1.36011389749466	chr15	81925793	81926297	+	0	NA	intron (NM_028897, intron 15 of 30)	intron (NM_028897, intron 15 of 30)	25498	NM_028897	74369	Mm.289351	NM_028897	ENSMUSG00000068117	Mei1	4932408F18Rik|mei1	meiosis defective 1	protein-coding
common_peak2-21484-45-33-0.772895184094533-1.81177654248742	chr11	88235981	88236991	+	0	NA	intron (NM_054043, intron 7 of 13)	B4A|SINE|B4	70211	NR_039545	100628571		NR_039545	miRBase:MI0016973	Mir378b	mmu-mir-378b	microRNA 378b	ncRNA
common_peak1-18018-34-59--0.524822068607253-0.925339689277516	chr7	141474846	141475798	+	0	NA	intron (NM_001081331, intron 5 of 7)	RSINE1|SINE|B4	-58542	NM_007400	11489	Mm.439714	NM_007400	ENSMUSG00000054555	Adam12	Mltna|mKIAA4001	a disintegrin and metallopeptidase domain 12 (meltrin alpha)	protein-coding
common_peak1-13533-39-29-0.708870651310635-1.42714050806394	chr2	165969062	165970194	+	0	NA	intron (NM_028072, intron 1 of 20)	intron (NM_028072, intron 1 of 20)	11157	NM_001252578	72043	Mm.1011	NM_028072	ENSMUSG00000006800	Sulf2	2010004N24Rik|AU020235|MSulf-2|mKIAA1247	sulfatase 2	protein-coding
unique_peak2-39367-6-6--0.241956811677302-0.947717972411649	chr9	13300202	13300633	+	0	NA	Intergenic	Intergenic	65836	NR_028271	18689	Mm.41972	NM_008835		Phxr4	Sp5	per-hexamer repeat gene 4	ncRNA
unique_peak1-6665-10-2-1.77145284428761-2.09384600808989	chr8	18728950	18729402	+	0	NA	intron (NM_007426, intron 1 of 8)	intron (NM_007426, intron 1 of 8)	12386	NM_007426	11601	Mm.439874	NM_007426	ENSMUSG00000031465	Angpt2	Agpt2|Ang-2|Ang2	angiopoietin 2	protein-coding
unique_peak1-3927-9-1-2.18961340640422-2.31132995230379	chr2	26534450	26534881	+	0	NA	Intergenic	Lx2B|LINE|L1	-7863	NM_010695	16821	Mm.123925	NM_010695	ENSMUSG00000026919	Lcn4	A630045M08Rik|Vnsp2	lipocalin 4	protein-coding
unique_peak2-34786-5-9--1.02630843089322-1.21398586181642	chr15	62079131	62079415	+	0	NA	intron (NR_003368, intron 8 of 8)	B1_Mus1|SINE|Alu	-28267	NR_003523	67552	Mm.484027	NM_026230		H2afy3	4933432H23Rik	H2A histone family, member Y3	pseudo
unique_peak1-2704-15-3-2.01216475055566-3.03427613622886	chr16	90915850	90916418	+	0	NA	Intergenic	HAL1|LINE|L1	18960	NM_026502	68001	Mm.45374	NM_026502	ENSMUSG00000022972	1110004E09Rik	-	RIKEN cDNA 1110004E09 gene	protein-coding
common_peak1-12423-71-64-0.622076365691517-2.03107653970319	chr17	75109478	75112151	+	0	NA	Intergenic	B3A|SINE|B2	-6276	NM_152817	74196	Mm.209503	NM_152817	ENSMUSG00000024078	Ttc27	2610511O17Rik	tetratricopeptide repeat domain 27	protein-coding
unique_peak1-6201-26-2-3.34293659143731-6.68488818359222	chr6	149237107	149238245	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-20260	NM_001289661	67246	Mm.333515	NM_026054	ENSMUSG00000032712	2810474O19Rik	6720435I21Rik|AA536804|AU020969|GET|Kiaa1551	RIKEN cDNA 2810474O19 gene	protein-coding
common_peak1-13970-34-25-0.681628808860174-1.24799833770813	chr2	92751029	92752192	+	0	NA	Intergenic	RMER5|LTR|ERV1	-3648	NM_030725	80976	Mm.33490	NM_030725	ENSMUSG00000027220	Syt13	5730409J20Rik|AI549909|mKIAA1427	synaptotagmin XIII	protein-coding
common_peak2-20465-6-14--1.34149248522822-1.01572999746118	chr10	43604648	43605070	+	0	NA	exon (NM_001081054, exon 6 of 11)	exon (NM_001081054, exon 6 of 11)	16683	NM_001081054	76563	Mm.5904	NM_001081054	ENSMUSG00000019863	Qrsl1	2700038P16Rik|C80053|GatA	glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1	protein-coding
unique_peak2-39646-2-7--1.91745425626332-1.45399745587252	chr9	106249804	106250164	+	0	NA	intron (NM_027354, intron 10 of 10)	intron (NM_027354, intron 10 of 10)	-20979	NM_153459	235584	Mm.275584	NM_153459	ENSMUSG00000053716	Dusp7	AU015694|Mkpx|Pyst2	dual specificity phosphatase 7	protein-coding
common_peak2-31625-15-29--0.894725845052863-1.1282783422172	chr8	123212007	123212864	+	0	NA	Intergenic	Intergenic	20215	NM_001293559	12857	Mm.386758	NM_009941	ENSMUSG00000031818	Cox4i1	AL024441|COX|COX IV-1|COXIV|Cox4|Cox4a|IV-1	cytochrome c oxidase subunit IV isoform 1	protein-coding
common_peak1-9915-53-70--0.0087741070887537-0.302570059929088	chr12	91588493	91589657	+	0	NA	Intergenic	Intergenic	387803	NM_010050	13371	Mm.21389	NM_010050	ENSMUSG00000007682	Dio2	5DII|AI324267|DIOII	deiodinase, iodothyronine, type II	protein-coding
unique_peak2-38207-5-5--0.289342836727009-0.909929411522249	chr6	113168164	113168571	+	0	NA	Intergenic	Intergenic	-19470	NM_026849	97287	Mm.197816	NM_026849	ENSMUSG00000030269	Mtmr14	1110061O04Rik|AW553738|C76151	myotubularin related protein 14	protein-coding
common_peak2-22057-39-54--0.165598466605506-0.353756356258781	chr12	70824372	70825402	+	0	NA	intron (NM_145443, intron 1 of 9)	B1_Mur2|SINE|Alu	974	NM_145443	217666	Mm.103362	NM_145443	ENSMUSG00000020988	L2hgdh	BC016226	L-2-hydroxyglutarate dehydrogenase	protein-coding
unique_peak1-474-10-3-1.35641534500877-1.75805390616669	chr1	176819214	176819741	+	0	NA	intron (NM_011825, intron 1 of 1)	intron (NM_011825, intron 1 of 1)	32473	NM_011825	23893	Mm.25760	NM_011825	ENSMUSG00000050069	Grem2	Gremlin2|Prdc	gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis)	protein-coding
common_peak1-15610-14-19--0.422711934529718-0.403453972741636	chr4	132535557	132536184	+	0	NA	intron (NM_010208, intron 1 of 12)	B3|SINE|B2	5860	NM_010208	14191	Mm.271665	NM_010208	ENSMUSG00000028874	Fgr	-	Gardner-Rasheed feline sarcoma viral (Fgr) oncogene homolog	protein-coding
common_peak2-22283-12-25--1.05166373305345-1.1381569562463	chr13	12460654	12461570	+	0	NA	Intergenic	B4A|SINE|B4	-26530	NM_144835	217995	Mm.171186	NM_144835	ENSMUSG00000050244	Heatr1	AA517551|B130016L12Rik|BC019693	HEAT repeat containing 1	protein-coding
unique_peak2-33376-6-6--0.241956811677302-0.947717972411649	chr11	43385508	43385930	+	0	NA	intron (NM_001045530, intron 3 of 5)	intron (NM_001045530, intron 3 of 5)	29345	NM_008375	16204	Mm.142716	NM_008375	ENSMUSG00000020405	Fabp6	GT|I-15P|I-BABP|ILBP|ILBP3|Illbp	fatty acid binding protein 6, ileal (gastrotropin)	protein-coding
unique_peak1-324-11-0-3.50869358425161-3.61235994796777	chr1	132364713	132365493	+	0	NA	Intergenic	HAL1|LINE|L1	-5786	NM_010016	13136	Mm.101591	NM_010016	ENSMUSG00000026399	Cd55	Daf|Daf-GPI|Daf1|GPI-DAF	CD55 antigen	protein-coding
common_peak2-22641-10-7-0.356415345008769-1.12966497611638	chr13	91911466	91911913	+	0	NA	intron (NM_028790, intron 8 of 14)	intron (NM_028790, intron 8 of 14)	-30212	NR_028313	373852	Mm.466817	NR_015501	ENSMUSG00000074782	4833422C13Rik	-	RIKEN cDNA 4833422C13 gene	ncRNA
common_peak1-12228-26-31--0.0721009078415378-0.304589945962371	chr17	34981314	34982440	+	0	NA	TTS (NR_105936)	TTS (NR_105936)	235	NR_105936	102465586		NR_105936		Mir6970	mmu-mir-6970	microRNA mir-6970	ncRNA
unique_peak1-3609-38-6-2.76409773724093-8.37587362740872	chr19	32595233	32596519	+	0	NA	Intergenic	RCHARR1|DNA|MER1_type	35617	NM_010799	17330	Mm.255116	NM_010799	ENSMUSG00000024896	Minpp1	AA408516	multiple inositol polyphosphate histidine phosphatase 1	protein-coding
unique_peak1-2309-8-0-3.00522241794757-2.70926996097583	chr15	81562696	81563188	+	0	NA	Intergenic	Intergenic	-2593	NM_001146174	19387	Mm.270975	NM_011241	ENSMUSG00000022391	Rangap1	C79654|Fug1|mKIAA1835	RAN GTPase activating protein 1	protein-coding
common_peak1-13111-10-9-0.0344872501214071-1.05503135781948	chr19	8870699	8871198	+	0	NA	intron (NM_026329, intron 3 of 7)	B3A|SINE|B2	2099	NM_026329	67710	Mm.22117	NM_026329	ENSMUSG00000071662	Polr2g	2410046K11Rik|A230108L04Rik|C76415|RBP7|Rpo2-7l	polymerase (RNA) II (DNA directed) polypeptide G	protein-coding
common_peak1-9916-19-33--0.684775514588653-0.884951936461256	chr12	91590172	91591046	+	0	NA	Intergenic	Intergenic	386269	NM_010050	13371	Mm.21389	NM_010050	ENSMUSG00000007682	Dio2	5DII|AI324267|DIOII	deiodinase, iodothyronine, type II	protein-coding
common_peak2-28398-11-11--0.0762689164695427-0.301029995663976	chr4	140617172	140617832	+	0	NA	Intergenic	Intergenic	-1042	NM_001145958	230872	Mm.80685	NM_172122	ENSMUSG00000040860	Crocc	-	ciliary rootlet coiled-coil, rootletin	protein-coding
common_peak2-23911-23-48--0.892942339606128-1.7429888559758	chr16	5049173	5049862	+	0	NA	promoter-TSS (NM_026666)	promoter-TSS (NM_026666)	486	NM_001079814	74022	Mm.21652	NM_028720	ENSMUSG00000022536	Glyr1	2810419J22Rik|3930401K13Rik|AW545332|Npac	glyoxylate reductase 1 homolog (Arabidopsis)	protein-coding
unique_peak2-33260-5-9--1.02630843089322-1.21398586181642	chr10	128256399	128257022	+	0	NA	TTS (NM_028873)	TTS (NM_028873)	1977	NM_024180	66844	Mm.235562	NM_024180	ENSMUSG00000025353	Ormdl2	0610012C09Rik	ORM1-like 2 (S. cerevisiae)	protein-coding
common_peak1-15111-14-50--1.77320918161385-4.61848063467331	chr3	135422883	135423679	+	0	NA	Intergenic	Lx4A|LINE|L1	-64962	NM_026228	67547	Mm.30239	NM_026228	ENSMUSG00000053897	Slc39a8	4933419D20Rik|AA986696|BIGM103|ZIP-8|Zip8	solute carrier family 39 (metal ion transporter), member 8	protein-coding
common_peak2-20772-23-40--0.635784500109003-0.950816664083192	chr10	117147724	117148671	+	0	NA	promoter-TSS (NM_010786)	promoter-TSS (NM_010786)	-383	NM_001288586	17246	Mm.22670	NM_010786	ENSMUSG00000020184	Mdm2	1700007J15Rik|AA415488|Mdm-2	transformed mouse 3T3 cell double minute 2	protein-coding
common_peak2-25360-57-92--0.273125771029102-0.590512137238174	chr18	80933337	80934342	+	0	NA	intron (NM_001201569, intron 28 of 29)	intron (NM_001201569, intron 28 of 29)	-24029	NM_001164109	18018	Mm.329560	NM_016791	ENSMUSG00000033016	Nfatc1	2210017P03Rik|AI449492|AV076380|NF-ATc|NFAT2|NFATc|Nfatcb	nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1	protein-coding
common_peak2-32427-23-48--0.892942339606128-1.7429888559758	chrX	166660987	166661802	+	0	NA	Intergenic	Intergenic	-244545	NR_029457	654820	Mm.34441	NM_001039559	ENSMUSG00000072844	G530011O06Rik	-	RIKEN cDNA G530011O06 gene	ncRNA
common_peak1-7705-79-53-1.07394766501315-5.2531627311021	chr1	86433798	86435349	+	0	NA	Intergenic	Intergenic	1060812	NM_030194	109032	Mm.335802	NM_030194	ENSMUSG00000070034	Sp110	5031415C07Rik|52kDa|5830484A20Rik|ENSMUSG00000075603|Ifi75|Ipr1	Sp110 nuclear body protein	protein-coding
common_peak1-17532-92-117-0.209709034340923-0.611164403819789	chr7	28808054	28810181	+	0	NA	Intergenic	RLTR6-int|LTR|ERV1	-9983	NM_001254951	100043772	Mm.129275	NM_001100456		Zfp850	C130069I09Rik|Gm4636	zinc finger protein 850	protein-coding
unique_peak2-33510-3-8--1.58390809140159-1.39487600375387	chr11	74482895	74483389	+	0	NA	3' UTR (NM_001081158, exon 26 of 26)	3' UTR (NM_001081158, exon 26 of 26)	20145	NM_001081158	74148	Mm.214574	NM_001081158	ENSMUSG00000020741	Cluh	1300001I01Rik|Kiaa0664|mKIAA0664	clustered mitochondria (cluA/CLU1) homolog	protein-coding
common_peak1-15849-16-19--0.203664452619301-0.325169893479371	chr5	3321598	3322270	+	0	NA	Intergenic	Intergenic	-22378	NM_009873	12571	Mm.31672	NM_009873	ENSMUSG00000040274	Cdk6	5830411I20|AI504062|Crk2	cyclin-dependent kinase 6	protein-coding
common_peak2-25937-33-19-1.00940946763817-1.9602491241746	chr19	46979215	46980043	+	0	NA	intron (NM_029810, intron 3 of 17)	intron (NM_029810, intron 3 of 17)	57212	NM_029810	76952	Mm.40965	NM_029810	ENSMUSG00000025041	Nt5c2	2010002I23Rik|CnII|ENSMUSG00000025039|Gm9751|Gmp|Nt5b|Pnt5|cN-II	5'-nucleotidase, cytosolic II	protein-coding
common_peak1-9652-19-16-0.315224485411347-0.448200956659575	chr12	91667835	91669065	+	0	NA	Intergenic	L1Md_F2|LINE|L1	308428	NM_010050	13371	Mm.21389	NM_010050	ENSMUSG00000007682	Dio2	5DII|AI324267|DIOII	deiodinase, iodothyronine, type II	protein-coding
unique_peak2-36223-3-13--2.22133801201688-2.36932189928148	chr2	35582660	35583366	+	0	NA	exon (NM_001114124, exon 15 of 16)	exon (NM_001114124, exon 15 of 16)	30761	NM_001290639	69601	Mm.29629	NM_001001602	ENSMUSG00000026883	Dab2ip	2310011D08Rik|AI480459|Aip1|mKIAA1743	disabled 2 interacting protein	protein-coding
unique_peak1-5424-10-5-0.771452844287613-1.33892459842472	chr5	113216477	113217003	+	0	NA	intron (NM_028901, intron 31 of 43)	intron (NM_028901, intron 31 of 43)	-5572	NR_040675	67360	Mm.59218	NR_040675	ENSMUSG00000098230	1700095B10Rik	-	RIKEN cDNA 1700095B10 gene	ncRNA
common_peak2-26283-19-14-0.495796731053168-0.607095980551316	chr2	30845159	30845787	+	0	NA	intron (NM_028846, intron 1 of 24)	RLTR4_MM-int|LTR|ERV1	7674	NM_028846	74270	Mm.346654	NM_028846	ENSMUSG00000026854	Usp20	1700055M05Rik|AI467231|Vdu2	ubiquitin specific peptidase 20	protein-coding
unique_peak1-1180-11-1-2.50869358425161-2.83420869758413	chr11	100415379	100416069	+	0	NA	intron (NM_028918, intron 7 of 11)	intron (NM_028918, intron 7 of 11)	8778	NM_028918	74407	Mm.31590	NM_028918	ENSMUSG00000006784	Ttc25	4933404O19Rik	tetratricopeptide repeat domain 25	protein-coding
common_peak2-22420-20-16-0.400611943340854-0.507611860039817	chr13	36731768	36732551	+	0	NA	Intergenic	L1_Mus1|LINE|L1	94187	NM_153529	68404	Mm.232930	NM_153529	ENSMUSG00000039114	Nrn1	0710008J23Rik|Cpg15|Nrn	neuritin 1	protein-coding
common_peak1-8273-9-6-0.382258484346616-1.11707584880836	chr10	24753790	24754317	+	0	NA	Intergenic	Lx|LINE|L1	-106777	NM_007482	11846	Mm.154144	NM_007482	ENSMUSG00000019987	Arg1	AI|AI256583|Arg-1|PGIF	arginase, liver	protein-coding
unique_peak2-36955-4-7--1.02346051385325-1.09384600808989	chr3	108372524	108372834	+	0	NA	Intergenic	B2_Mm1a|SINE|B2	-1938	NM_025444	99730	Mm.24431	NM_025444		Taf13	1810004N01Rik|2010309N11Rik|AI847295|TAFII18	TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor	protein-coding
common_peak1-16780-12-9-0.326847890200276-0.459837087125828	chr6	38809823	38810354	+	0	NA	intron (NM_001294144, intron 1 of 14)	intron (NM_001294144, intron 1 of 14)	16101	NM_010433	15258	Mm.23790	NM_010433	ENSMUSG00000061436	Hipk2	1110014O20Rik|B230339E18Rik|Stank	homeodomain interacting protein kinase 2	protein-coding
common_peak2-22014-22-16-0.559821263837065-0.733541631673787	chr12	56779984	56780590	+	0	NA	intron (NM_001286263, intron 33 of 41)	B1_Mur3|SINE|Alu	80383	NM_020287	56856	Mm.114886	NM_020287	ENSMUSG00000045440	Insm2	Mlt1	insulinoma-associated 2	protein-coding
common_peak2-29913-12-11-0.0638134843664826-0.337263207250336	chr6	115319021	115319563	+	0	NA	intron (NM_001127330, intron 1 of 7)	intron (NM_001127330, intron 1 of 7)	8053	NM_001127330	19016	Mm.3020	NM_011146	ENSMUSG00000000440	Pparg	Nr1c3|PPAR-gamma|PPAR-gamma2|PPARgamma|PPARgamma2	peroxisome proliferator activated receptor gamma	protein-coding
unique_peak2-33377-5-11--1.28934283672701-1.477227296591	chr11	43643355	43644169	+	0	NA	intron (NM_007416, intron 1 of 1)	intron (NM_007416, intron 1 of 1)	6229	NM_007416	11548	Mm.39086	NM_007416	ENSMUSG00000050541	Adra1b	[a]1b	adrenergic receptor, alpha 1b	protein-coding
common_peak2-29325-8-10--0.454209200689727-1.078512453669	chr5	146914548	146915138	+	0	NA	intron (NM_001105160, intron 10 of 12)	intron (NM_001105160, intron 10 of 12)	24009	NM_001105160	100041449	Mm.301900	NM_001105160	ENSMUSG00000061292	Cyp3a59	ENSMUSG00000061292	cytochrome P450, family 3, subfamily a, polypeptide 59	protein-coding
common_peak2-26797-14-9-0.577288065470282-0.630231561310125	chr2	148197364	148197887	+	0	NA	Intergenic	Intergenic	-23488	NM_009219	20608	Mm.35324	NM_009219	ENSMUSG00000037014	Sstr4	Smstr4|sst4	somatostatin receptor 4	protein-coding
common_peak1-11105-13-12-0.0780323124966764-0.334470287753051	chr15	61717090	61717833	+	0	NA	Intergenic	ORR1E|LTR|MaLR	-99435	NM_001177354	17869	Mm.2444	NM_010849	ENSMUSG00000022346	Myc	AU016757|Myc2|Niard|Nird|bHLHe39	myelocytomatosis oncogene	protein-coding
common_peak2-24202-27-31--0.00845404910476422-0.304476922018591	chr16	64850763	64851780	+	0	NA	promoter-TSS (NM_178647)	promoter-TSS (NM_178647)	-640	NM_178647	106143	Mm.10160	NM_178647	ENSMUSG00000054604	Cggbp1	AA960172|AL023996|AW045841	CGG triplet repeat binding protein 1	protein-coding
common_peak2-30309-14-13-0.0918612383000403-0.332077462497413	chr7	19933313	19933937	+	0	NA	intron (NM_001127324, intron 2 of 6)	intron (NM_001127324, intron 2 of 6)	3205	NM_007948	13870	Mm.280913	NM_007948	ENSMUSG00000003549	Ercc1	Ercc-1	excision repair cross-complementing rodent repair deficiency, complementation group 1	protein-coding
common_peak1-8267-20-24--0.155781405183531-0.319918318021793	chr10	23796610	23797494	+	0	NA	exon (NM_001010830, exon 1 of 1)	exon (NM_001010830, exon 1 of 1)	746	NM_001010830	215859	Mm.377239	NM_001010830	ENSMUSG00000096442	Taar8a	Gm230|taR-8a	trace amine-associated receptor 8A	protein-coding
common_peak1-15563-20-11-0.903112283870037-1.11267835143409	chr4	126102742	126103634	+	0	NA	intron (NM_153402, intron 1 of 18)	B3|SINE|B2	3598	NM_153402	214150	Mm.440915	NM_153402		Ago3	AW048688|C130014L07Rik|Eif2c3	argonaute RISC catalytic subunit 3	protein-coding
unique_peak1-3871-14-5-1.31425365963649-1.4372489031793	chr2	11376881	11377555	+	0	NA	Intergenic	L1MD3|LINE|L1	46499	NM_001177754	170768	Mm.19669	NM_133232	ENSMUSG00000026773	Pfkfb3	E330010H22Rik|iPFK-2|uPFK-2	6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3	protein-coding
common_peak2-19519-18-14-0.406028555619833-0.532159081577619	chr1	165281640	165282363	+	0	NA	Intergenic	L1MA6|LINE|L1	-38220	NM_175686	18933	Mm.288642	NM_011127	ENSMUSG00000026586	Prrx1	A230024N07Rik|AA755424|AI385634|AI843499|K-2|Pmx|Pmx1|Prx1|mHox	paired related homeobox 1	protein-coding
common_peak1-8979-11-8-0.338768582809301-1.14218153353838	chr11	58977232	58977867	+	0	NA	promoter-TSS (NM_173785)	promoter-TSS (NM_173785)	-302	NM_173785	216792	Mm.266175	NM_173785	ENSMUSG00000049287	Iba57	4930543L23Rik|A230051G13Rik|C1orf69	IBA57, iron-sulfur cluster assembly homolog (S. cerevisiae)	protein-coding
common_peak1-14759-11-6-0.701338662194009-1.32595962126035	chr3	88210704	88211379	+	0	NA	intron (NM_025928, intron 1 of 4)	PB1D7|SINE|Alu	3197	NM_025928	67037	Mm.36715	NM_025928	ENSMUSG00000028066	Pmf1	2600009M07Rik|AL033286|AW060657	polyamine-modulated factor 1	protein-coding
unique_peak1-1543-13-9-0.456543935750406-0.53895475198017	chr13	20433767	20434468	+	0	NA	intron (NM_080288, intron 13 of 21)	intron (NM_080288, intron 13 of 21)	-130742	NM_198093	140580	Mm.342392	NM_080288	ENSMUSG00000041112	Elmo1	6330578D22Rik|C230095H21Rik|CED-12	engulfment and cell motility 1	protein-coding
unique_peak1-5216-16-3-2.11826364226806-2.65002542325363	chr5	36359378	36360256	+	0	NA	TTS (NM_030889)	TTS (NM_030889)	123849	NM_027373	70292	Mm.125167	NM_027373	ENSMUSG00000029094	Afap1	2600003E23Rik|9630044L16Rik|AI848729|Afap|mKIAA3018	actin filament associated protein 1	protein-coding
common_peak2-30150-11-6-0.701338662194009-1.32595962126035	chr6	145977411	145977805	+	0	NA	Intergenic	Intergenic	94941	NM_010656	16651	Mm.49689	NM_010656	ENSMUSG00000030255	Sspn	Krag	sarcospan	protein-coding
common_peak1-10049-12-9-0.326847890200276-0.459837087125828	chr13	18717201	18717711	+	0	NA	Intergenic	Intergenic	-91705	NM_172120	218035	Mm.27389	NM_172120	ENSMUSG00000041236	Vps41	AI317346|Vam2|mVam2	vacuolar protein sorting 41 (yeast)	protein-coding
common_peak1-8052-7-8--0.370834171144123-1.00793137938329	chr1	172274648	172275077	+	0	NA	intron (NM_027528, intron 5 of 7)	B4|SINE|B4	35870	NM_001039593	76925	Mm.33631	NM_001039593	ENSMUSG00000042800	1700015E13Rik	-	RIKEN cDNA 1700015E13 gene	protein-coding
common_peak1-11675-65-59-0.585275343868608-1.7118398925941	chr16	25583938	25585976	+	0	NA	Intergenic	Intergenic	-98894	NM_001127259	22061	Mm.20894	NM_011641	ENSMUSG00000022510	Trp63	AI462811|Ket|P51/P63|P63|P73l|Tp63|Trp53rp1	transformation related protein 63	protein-coding
common_peak1-18322-11-24--1.13516260552311-1.3750876294627	chr8	57488107	57488725	+	0	NA	Intergenic	Intergenic	897345	NM_175939	244486	Mm.67684	NM_175939	ENSMUSG00000046258	Adam29	-	a disintegrin and metallopeptidase domain 29	protein-coding
common_peak2-26226-10-10--0.103016273628528-0.301029995663987	chr2	27417375	27417912	+	0	NA	Intergenic	Intergenic	46976	NM_080848	140858	Mm.28265	NM_080848	ENSMUSG00000026917	Wdr5	2410008O07Rik|AA408785|AA960360|Big|Big-3	WD repeat domain 5	protein-coding
unique_peak2-33796-3-5--0.998945590680433-0.96108193396963	chr11	120255979	120256365	+	0	NA	intron (NM_199469, intron 12 of 15)	B3|SINE|B2	-16112	NM_027980	71885	Mm.274890	NM_027980	ENSMUSG00000025384	2310003H01Rik	Faap100	RIKEN cDNA 2310003H01 gene	protein-coding
unique_peak1-7409-16-4-1.7963355473807-2.18192634393779	chrX	126776208	126776906	+	0	NA	intron (NM_172493, intron 23 of 26)	intron (NM_172493, intron 23 of 26)	492279	NM_172493	54004	Mm.10763	NM_017398	ENSMUSG00000034480	Diap2	Dia3|Diaph2|Drf2|E430022I22Rik	diaphanous homolog 2 (Drosophila)	protein-coding
common_peak2-25016-49-78--0.297496925151919-0.601241822381509	chr18	21001798	21002872	+	0	NA	intron (NM_177038, intron 18 of 28)	intron (NM_177038, intron 18 of 28)	52244	NM_177038	75964	Mm.273769	NM_029491	ENSMUSG00000033382	Trappc8	5033403J15Rik|AI845423|D030074E01Rik|Trs85|mKIAA1012	trafficking protein particle complex 8	protein-coding
unique_peak1-4063-12-2-2.06381348436648-2.79529063155376	chr2	62333972	62334549	+	0	NA	Intergenic	Intergenic	-12550	NM_008100	14526	Mm.45494	NM_008100	ENSMUSG00000000394	Gcg	GLP-1|Glu|PPG	glucagon	protein-coding
unique_peak1-1527-10-4-1.03448725012141-1.5150158574804	chr13	13866868	13867390	+	0	NA	intron (NM_010748, intron 50 of 52)	B4A|SINE|B4	-9677	NM_010317	14706	Mm.215394	NM_010317	ENSMUSG00000021303	Gng4	-	guanine nucleotide binding protein (G protein), gamma 4	protein-coding
unique_peak1-6463-16-2-2.53330114154691-3.78760380288747	chr7	103900551	103901267	+	0	NA	intron (NM_011858, intron 11 of 32)	ID_B1|SINE|B4	49150	NR_045874	791381	Mm.402112	NR_045874	ENSMUSG00000053049	Gm15413	ENSMUSG00000053049|OTTMUSG00000021246	predicted gene 15413	ncRNA
common_peak2-22335-12-29--1.25811461052088-1.65862513589797	chr13	23570622	23571165	+	0	NA	intron (NM_001289614, intron 6 of 6)	intron (NM_001289614, intron 6 of 6)	9833	NM_001289615	238555	Mm.129668	NM_175938		Btn2a2	Btn2|D030063K05	butyrophilin, subfamily 2, member A2	protein-coding
unique_peak1-5356-11-2-1.92373108353046-2.32232533660526	chr5	92372237	92372746	+	0	NA	Intergenic	Intergenic	19091	NR_073442	68098	Mm.159453	NM_026557	ENSMUSG00000029397	Rchy1	ARNIP|CHIMP|Pirh2|Zfp363|Znf363	ring finger and CHY zinc finger domain containing 1	protein-coding
unique_peak1-6193-7-1-1.79909083029819-1.80617997398389	chr6	147776838	147777284	+	0	NA	Intergenic	Intergenic	138298	NR_033636	100039727	Mm.396220	NR_033636	ENSMUSG00000085077	1700049E15Rik	Gm15761|OTTMUSG00000026044	RIKEN cDNA 1700049E15 gene	ncRNA
common_peak2-30398-21-17-0.399564263823923-0.561823156887258	chr7	34233574	34234191	+	0	NA	Intergenic	ETnERV2-int|LTR|ERVK	75629	NM_001270543	545948	Mm.349644	NM_001270543		Scgb1b20	EG545948|Gm5895	secretoglobin, family 1B, member 20	protein-coding
common_peak2-20154-6-10--0.894033508256995-1.21398586181642	chr1	169699465	169699921	+	0	NA	intron (NM_033652, intron 2 of 7)	intron (NM_033652, intron 2 of 7)	80004	NM_033652	110648	Mm.330081	NM_033652	ENSMUSG00000026686	Lmx1a	Lmx1.1|dr|dreher|sst	LIM homeobox transcription factor 1 alpha	protein-coding
unique_peak1-5881-8-3-1.00522241794757-1.39487600375387	chr6	86522682	86523203	+	0	NA	Intergenic	Intergenic	45547	NR_037961	72012	Mm.349174	NR_037960	ENSMUSG00000097048	1600020E01Rik	-	RIKEN cDNA 1600020E01 gene	ncRNA
common_peak1-8437-81-75-0.62412208956498-2.31229383074526	chr10	78351153	78353041	+	0	NA	Intergenic	L1Md_F2|LINE|L1	13803	NM_207571	257734	Mm.334149	NM_207571	ENSMUSG00000062873	Olfr1355	GA_x5J8B7W4DUT-12263-11330|MOR139-6	olfactory receptor 1355	protein-coding
common_peak1-15782-37-15-1.52599307148582-3.88696893869767	chr4	155235279	155236409	+	0	NA	exon (NM_031872, exon 4 of 6)	exon (NM_031872, exon 4 of 6)	1618	NM_031872	83771	Mm.358792	NM_031872	ENSMUSG00000029072	Tas1r3	Sac|T1r3	taste receptor, type 1, member 3	protein-coding
common_peak1-10480-8-18--1.24270509549601-1.15812782348128	chr13	113794511	113795049	+	0	NA	Intergenic	L1Md_F|LINE|L1	10704	NM_001037914	622408	Mm.360976	NM_001037914	ENSMUSG00000074651	Mcidas	EG622408|Gm6320|Idas|Mci|Mcin	multiciliate differentiation and DNA synthesis associated cell cycle protein	protein-coding
unique_peak1-5984-7-5-0.214128329577033-1.01466476204226	chr6	98796768	98797180	+	0	NA	Intergenic	Intergenic	181318	NM_001197322	108655	Mm.234965	NM_053202	ENSMUSG00000030067	Foxp1	3110052D19Rik|4932443N09Rik|AI461938|AW494214	forkhead box P1	protein-coding
unique_peak1-1728-11-8-0.338768582809301-1.14218153353838	chr13	98683995	98684609	+	0	NA	intron (NM_012026, intron 35 of 35)	intron (NM_012026, intron 35 of 35)	291818	NM_012026	110596	Mm.252718	NM_012026	ENSMUSG00000021662	Arhgef28	9230110L08Rik|AI323540|D13Bwg1089e|RIP2|Rgnef|RhoGEF|Rhoip2|p190RhoGEF	Rho guanine nucleotide exchange factor (GEF) 28	protein-coding
unique_peak2-37434-7-12--0.901348887842903-1.31827279259406	chr4	152009506	152010031	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-61881	NR_033138	330004	Mm.291863	NM_001033414		Gm833	-	predicted gene 833	ncRNA
unique_peak1-482-7-1-1.79909083029819-1.80617997398389	chr1	177558100	177558556	+	0	NA	Intergenic	Intergenic	-2562	NM_010209	14194	Mm.41502	NM_010209		Fh1	Fh|Fh-1	fumarate hydratase 1	protein-coding
common_peak2-22111-8-13--0.802132504110034-0.562038191119711	chr12	81484834	81485242	+	0	NA	intron (NM_177267, intron 5 of 8)	intron (NM_177267, intron 5 of 8)	7626	NR_037207	100526530		NR_037207		Mir1843a	Mir1843|mmu-mir-1843|mmu-mir-1843a	microRNA 1843a	ncRNA
common_peak2-28950-19-19-0.0807592317743238-0.322753776620787	chr5	100428914	100429718	+	0	NA	Intergenic	Intergenic	-21359	NM_001077265	11991	Mm.150231	NM_007516		Hnrnpd	Auf1|Hnrpd	heterogeneous nuclear ribonucleoprotein D	protein-coding
common_peak2-21603-17-11-0.633333837483882-0.769930178837768	chr11	99127599	99128075	+	0	NA	Intergenic	Intergenic	18715	NM_029393	75706	Mm.46378	NM_029393	ENSMUSG00000020913	Krt24	2310058N18Rik|2310075C18Rik	keratin 24	protein-coding
common_peak2-27347-17-13-0.410941416147434-0.546772548767014	chr3	79152825	79153404	+	0	NA	intron (NM_001142953, intron 1 of 4)	Lx8|LINE|L1	3816	NM_001142953	100233207	Mm.373801	NM_001142953	ENSMUSG00000091685	Gm17359	-	predicted gene, 17359	protein-coding
common_peak2-29471-11-8-0.338768582809301-1.14218153353838	chr6	30336790	30337365	+	0	NA	intron (NM_172735, intron 2 of 10)	intron (NM_172735, intron 2 of 10)	3933	NM_172735	232679	Mm.29780	NM_172735	ENSMUSG00000039130	Zc3hc1	1110054L24Rik|AU018540|AU019789|HSPC216|Nipa	zinc finger, C3HC type 1	protein-coding
common_peak1-11768-32-26-0.524204517056192-0.869438253311882	chr16	43889067	43890568	+	0	NA	promoter-TSS (NM_029128)	promoter-TSS (NM_029128)	-28	NM_029128	106248	Mm.275354	NM_029128	ENSMUSG00000022704	Qtrtd1	3110012M05Rik|4930470H18Rik|AI648807	queuine tRNA-ribosyltransferase domain containing 1	protein-coding
common_peak1-17892-19-28--0.455293668465885-0.518921928796332	chr7	119720054	119720996	+	0	NA	intron (NM_020606, intron 10 of 12)	intron (NM_020606, intron 10 of 12)	-102309	NM_001166584	21676	Mm.24685	NM_009346	ENSMUSG00000055320	Tead1	2610024B07Rik|B230114H05Rik|Gtrgeo5|TEAD-1|TEF-1|Tcf13|mTEF-1	TEA domain family member 1	protein-coding
common_peak1-12049-23-16-0.634304663258741-0.82304638657543	chr17	21845222	21846114	+	0	NA	5' UTR (NM_001008501, exon 2 of 6)	5' UTR (NM_001008501, exon 2 of 6)	960	NM_001008501	240034	Mm.34723	NM_001008501	ENSMUSG00000067928	Zfp760	9430018I06|BC029103	zinc finger protein 760	protein-coding
common_peak2-30114-9-12--0.510826311736872-0.394412252720706	chr6	136518775	136519251	+	0	NA	intron (NM_019426, intron 5 of 14)	intron (NM_019426, intron 5 of 14)	51641	NM_019426	54343	Mm.173271	NM_019426	ENSMUSG00000030213	Atf7ip	2610204M12Rik|AM|Mcaf1	activating transcription factor 7 interacting protein	protein-coding
common_peak2-20515-17-24--0.425559851569687-0.427564438475253	chr10	60816188	60817031	+	0	NA	intron (NM_013753, intron 2 of 19)	intron (NM_013753, intron 2 of 19)	29662	NM_013753	27355	Mm.269699	NM_013753	ENSMUSG00000020092	Pald1	MMPAL|Pald|mKIAA1274	phosphatase domain containing, paladin 1	protein-coding
unique_peak1-2833-17-8-1.04837133676273-1.30305656033811	chr17	27940026	27940915	+	0	NA	intron (NM_001033279, intron 1 of 4)	MTC|LTR|MaLR	17017	NM_001033279	224647	Mm.196577	NM_001033279	ENSMUSG00000056692	D17Wsu92e	AU020189|C030010A15|C80239	DNA segment, Chr 17, Wayne State University 92, expressed	protein-coding
common_peak2-24723-18-32--0.731474968130102-0.907815120698057	chr17	47009926	47010702	+	0	NA	Intergenic	Intergenic	-17256	NM_178385	72726	Mm.33780	NM_178385	ENSMUSG00000036430	Tbcc	2810055C19Rik	tubulin-specific chaperone C	protein-coding
unique_peak1-3507-11-4-1.18676548936425-1.68134727924692	chr19	16188114	16188599	+	0	NA	Intergenic	Intergenic	-18965	NM_008139	14682	Mm.439701	NM_008139	ENSMUSG00000024639	Gnaq	1110005L02Rik|6230401I02Rik|AA408290|AW060788|Dsk1|Dsk10|Galphaq|Gq|GqI	guanine nucleotide binding protein, alpha q polypeptide	protein-coding
unique_peak2-35909-6-5--0.0195643903408542-0.947717972411649	chr19	5024061	5024444	+	0	NA	exon (NM_007854, exon 1 of 12)	exon (NM_007854, exon 1 of 12)	246	NM_007854	13340	Mm.4930	NM_007854	ENSMUSG00000024891	Slc29a2	Der12|Ent2|Hnp36	solute carrier family 29 (nucleoside transporters), member 2	protein-coding
unique_peak2-34429-6-12--1.13504160776079-1.45089835786865	chr14	20694786	20695326	+	0	NA	exon (NM_010315, exon 4 of 4)	exon (NM_010315, exon 4 of 4)	36909	NR_105025	52512	Mm.483998	NR_105025		D14Ertd670e	-	DNA segment, Chr 14, ERATO Doi 670, expressed	ncRNA
unique_peak1-3903-8-2-1.42025991722641-1.65811743852845	chr2	22670650	22671047	+	0	NA	intron (NM_019456, intron 1 of 13)	MER2B|DNA|MER2_type	41001	NM_019456	54519	Mm.14255	NM_019456	ENSMUSG00000026786	Apbb1ip	9930118P07Rik|Prp48	amyloid beta (A4) precursor protein-binding, family B, member 1 interacting protein	protein-coding
common_peak2-20284-15-14-0.105274154947137-0.330004445983672	chr1	191454869	191455444	+	0	NA	Intergenic	Intergenic	56809	NM_001081363	108000	Mm.129746	NM_001081363	ENSMUSG00000026605	Cenpf	6530404A22Rik|AI325968|CENF|Lek1|PRO1779|mitosin	centromere protein F	protein-coding
unique_peak2-34746-2-8--2.08737925770563-1.65811743852845	chr15	54571288	54571875	+	0	NA	Intergenic	Intergenic	-5902	NM_010930	18133	Mm.5167	NM_010930	ENSMUSG00000037362	Nov	C130088N23Rik|CCN3	nephroblastoma overexpressed gene	protein-coding
common_peak1-7997-85-79-0.633475153237288-2.48525259113198	chr1	163929504	163930580	+	0	NA	intron (NM_172646, intron 19 of 19)	intron (NM_172646, intron 19 of 19)	-5058	NR_040562	72753	Mm.452125	NR_040562	ENSMUSG00000090260	2810442N19Rik	-	RIKEN cDNA 2810442N19 gene	ncRNA
unique_peak2-38115-7-6--0.00826409175941478-0.97990265578305	chr6	72788324	72788768	+	0	NA	Intergenic	Intergenic	-49507	NM_009332	21415	Mm.440067	NM_009332	ENSMUSG00000055799	Tcf7l1	Tcf-3|Tcf3|bHLHb21	transcription factor 7 like 1 (T cell specific, HMG box)	protein-coding
common_peak1-12606-28-39--0.2689689750659-0.409729630423047	chr18	25678645	25679890	+	0	NA	intron (NM_001146293, intron 3 of 12)	intron (NM_001146293, intron 3 of 12)	233217	NM_133195	108013	Mm.266435	NM_133195	ENSMUSG00000024268	Celf4	A230070D14Rik|BRUNOL-4|Brul4|Brunol4|C130060B05Rik	CUGBP, Elav-like family member 4	protein-coding
unique_peak2-32690-6-7--0.434601889619698-0.97990265578305	chr1	141459902	141460277	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-3290	NM_015780	50702	Mm.220362	NM_015780	ENSMUSG00000057037	Cfhr1	AI194696|CFHRB|Cfhl1	complement factor H-related 1	protein-coding
common_peak2-28528-13-22--0.745089925419244-0.690311289528838	chr5	129908517	129909040	+	0	NA	Intergenic	Intergenic	-98328	NM_172276	231769	Mm.288714	NM_172276	ENSMUSG00000029439	Sfswap	1190005N23Rik|6330437E22Rik|AI197402|AW212079|SWAP|Sfrs8|Srsf8	splicing factor, suppressor of white-apricot homolog (Drosophila)	protein-coding
common_peak2-23913-9-10--0.269818212233077-1.05503135781948	chr16	5203442	5203925	+	0	NA	exon (NM_013796, exon 2 of 10)	exon (NM_013796, exon 2 of 10)	422	NM_013796	27426	Mm.215641	NM_013796	ENSMUSG00000023143	Nagpa	AI596180|UCE	N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase	protein-coding
unique_peak1-11-17-1-3.21829633820504-4.59734841376773	chr1	97992346	97993263	+	0	NA	Intergenic	L1Md_T|LINE|L1	-74469	NR_040467	73454	Mm.396229	NR_040467		1700063A18Rik	-	RIKEN cDNA 1700063A18 gene	ncRNA
common_peak1-9197-13-7-0.778472030637769-0.817533494790411	chr11	80145710	80146318	+	0	NA	intron (NM_139228, intron 6 of 8)	intron (NM_139228, intron 6 of 8)	31600	NM_139228	246104	Mm.194148	NM_139228	ENSMUSG00000017692	Rhbdl3	AI847581|Rhbdl4|Rhomr1|Vrho	rhomboid, veinlet-like 3 (Drosophila)	protein-coding
common_peak2-30288-9-9--0.132314688483142-1.03275496310833	chr7	19095139	19095572	+	0	NA	Intergenic	Intergenic	22221	NM_054060	114868	Mm.389809	NM_054060	ENSMUSG00000070798	Psg25	cea13	pregnancy-specific glycoprotein 25	protein-coding
common_peak2-20935-3-5--0.998945590680433-0.96108193396963	chr11	8482526	8482875	+	0	NA	intron (NM_001083587, intron 3 of 30)	intron (NM_001083587, intron 3 of 30)	81838	NM_001083587	319939	Mm.337820	NM_001083587	ENSMUSG00000020422	Tns3	BC023928|F830010I22Rik|TEM6|Tens1	tensin 3	protein-coding
unique_peak1-7107-9-3-1.18961340640422-1.57096726280955	chr9	43261786	43262483	+	0	NA	Intergenic	Intergenic	143288	NM_023655	72169	Mm.273277	NM_023655	ENSMUSG00000032013	Trim29	1110047J21Rik|2810431N19Rik|4732461M22Rik|AI119726	tripartite motif-containing 29	protein-coding
common_peak2-20924-19-12-0.702247608520594-0.840839978588874	chr11	6388703	6389299	+	0	NA	Intergenic	Intergenic	-12922	NM_011221	19291	Mm.390332	NM_011221	ENSMUSG00000094483	Purb	2310015K15Rik|AA114818|Cager-2|D11Bwg0414e	purine rich element binding protein B	protein-coding
unique_peak1-5323-13-0-3.77847203063777-4.51544993495972	chr5	81023987	81024539	+	0	NA	Intergenic	Intergenic	-426355	NM_198702	319387	Mm.273631	NM_198702	ENSMUSG00000037605	Lphn3	5430402I23Rik|CIRL-3|D130075K09Rik|Gm1379|LEC3|mKIAA0768	latrophilin 3	protein-coding
common_peak1-7517-31-20-0.832921248034363-1.41893667893732	chr1	23187824	23188909	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-79274	NM_025746	66755	Mm.431297	NM_025746	ENSMUSG00000073730	4933415F23Rik	-	RIKEN cDNA 4933415F23 gene	protein-coding
common_peak2-32272-26-40--0.429652912459622-0.612304185853036	chrX	13071541	13073080	+	0	NA	Intergenic	Intergenic	27512	NM_173415	236690	Mm.90233	NM_173415	ENSMUSG00000051228	Nyx	CLNP|CSNB1|CSNB4|nob	nyctalopin	protein-coding
common_peak1-18539-25-20-0.469532482566345-0.662033714151238	chr8	94706611	94707502	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	172963	NR_110452	71296	Mm.86664	NR_033641	ENSMUSG00000031736	Crnde	4933436C20Rik	colorectal neoplasia differentially expressed (non-protein coding)	ncRNA
unique_peak1-400-9-5-0.604650905683064-1.21398586181642	chr1	155053324	155053760	+	0	NA	Intergenic	Intergenic	-19965	NM_008485	16782	Mm.329272	NM_008485	ENSMUSG00000026479	Lamc2	AA589349	laminin, gamma 2	protein-coding
unique_peak2-37188-6-7--0.434601889619698-0.97990265578305	chr4	57308454	57308896	+	0	NA	intron (NM_011207, intron 1 of 25)	intron (NM_011207, intron 1 of 25)	6034	NM_011207	545622	Mm.246552	NM_011207	ENSMUSG00000038764	Ptpn3	9530011I20Rik|PTP-H1|PTPCL	protein tyrosine phosphatase, non-receptor type 3	protein-coding
common_peak2-19565-102-124-0.305304192177467-1.00539549395807	chr1	10037260	10038517	+	0	NA	intron (NM_026493, intron 3 of 29)	intron (NM_026493, intron 3 of 29)	9589	NM_026493	211660	Mm.244046	NM_026493	ENSMUSG00000056763	Cspp1	2310020J12Rik|4930413O22Rik|AA387550|BC055915|Cspp2|Cspp3	centrosome and spindle pole associated protein 1	protein-coding
common_peak2-25080-11-16--0.578769256998726-0.503257505534083	chr18	35702608	35703473	+	0	NA	Intergenic	PB1D10|SINE|Alu	-10024	NR_038073	100503380	Mm.482118	NR_038073	ENSMUSG00000097769	Snhg4	Gm17457	small nucleolar RNA host gene 4	ncRNA
common_peak1-10920-8-11--0.579740082773585-1.14218153353838	chr15	7878571	7879012	+	0	NA	intron (NM_001081402, intron 10 of 17)	L1Md_T|LINE|L1	113241	NM_001301357	14573	Mm.4679	NM_010275	ENSMUSG00000022144	Gdnf	AI385739	glial cell line derived neurotrophic factor	protein-coding
common_peak2-30505-43-111--1.0247917365339-4.48486522873811	chr7	65370138	65371571	+	0	NA	Intergenic	Intergenic	524311	NM_008071	14402	Mm.8004	NM_008071	ENSMUSG00000033676	Gabrb3	A230092K12Rik|AW049585|Cp1|Gabrb-3|beta3	gamma-aminobutyric acid (GABA) A receptor, subunit beta 3	protein-coding
unique_peak1-2226-23-10-1.26233588587178-1.90052685918624	chr15	74922610	74923651	+	0	NA	Intergenic	RLTR14|LTR|ERV1	19249	NM_001099217	100041546	Mm.482110	NM_001099217	ENSMUSG00000022584	Ly6c2	Ly-6C.2|Ly-6C2	lymphocyte antigen 6 complex, locus C2	protein-coding
unique_peak2-34749-4-17--2.19338551529556-2.18192634393779	chr15	54853887	54854426	+	0	NA	intron (NM_001081288, intron 24 of 25)	intron (NM_001081288, intron 24 of 25)	49551	NM_001081288	319944	Mm.380957	NM_001081288	ENSMUSG00000037343	Taf2	150kDa|4732460C16Rik|AI425886|CIF150|TAF2B|TAFII-150|TAFII150	TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor	protein-coding
common_peak1-16959-36-18-1.23139357272417-2.89693331866911	chr6	85431744	85432790	+	0	NA	intron (NM_001001160, intron 3 of 13)	intron (NM_001001160, intron 3 of 13)	20721	NM_001001160	330369	Mm.38777	NM_001001160	ENSMUSG00000047013	Fbxo41	9630017H13|D6Ertd538e	F-box protein 41	protein-coding
common_peak2-27310-23-47--0.863194996212076-1.63155726056134	chr3	63976103	63976947	+	0	NA	Intergenic	(CAGAG)n|Simple_repeat|Simple_repeat	-35123	NM_001104592	100125586	Mm.469888	NM_001104592	ENSMUSG00000043897	Vmn2r2	ENSMUSG00000043897	vomeronasal 2, receptor 2	protein-coding
unique_peak1-215-14-5-1.31425365963649-1.4372489031793	chr1	87879669	87880292	+	0	NA	Intergenic	Intergenic	-22350	NM_001033290	227326	Mm.244158	NM_001033290	ENSMUSG00000049608	Gpr55	Gm218|Lpir1	G protein-coupled receptor 55	protein-coding
common_peak2-20643-41-92--0.838010106259371-2.74580449436197	chr10	80960917	80962507	+	0	NA	exon (NM_010102, exon 1 of 1)	exon (NM_010102, exon 1 of 1)	1170	NM_010102	13611	Mm.33065	NM_010102	ENSMUSG00000044199	S1pr4	Edg6|Lpc1|S1p4	sphingosine-1-phosphate receptor 4	protein-coding
common_peak2-25487-12-6-0.841421063030034-1.58711810488664	chr19	5018119	5018493	+	0	NA	Intergenic	MIRb|SINE|MIR	-5700	NM_007854	13340	Mm.4930	NM_007854	ENSMUSG00000024891	Slc29a2	Der12|Ent2|Hnp36	solute carrier family 29 (nucleoside transporters), member 2	protein-coding
common_peak1-8200-56-76--0.0311907152556579-0.302468067374185	chr10	4386843	4388362	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-36539	NM_001161822	56533	Mm.44606	NM_019958	ENSMUSG00000019775	Rgs17	6430507P11Rik|Rgsz2	regulator of G-protein signaling 17	protein-coding
common_peak1-8006-20-14-0.581184188982674-0.690311289528838	chr1	166044407	166045334	+	0	NA	promoter-TSS (NM_011347)	promoter-TSS (NM_011347)	-525	NM_011347	20344	Mm.3337	NM_011347	ENSMUSG00000026580	Selp	CD62P|GMP-140|Grmp|LECAM3|PADGEM	selectin, platelet	protein-coding
unique_peak1-1769-21-2-2.98452676454508-5.06563262809273	chr13	112578178	112578411	+	0	NA	intron (NM_011945, intron 1 of 19)	intron (NM_011945, intron 1 of 19)	20897	NM_011945	26401	Mm.15918	NM_011945	ENSMUSG00000021754	Map3k1	MAPKKK1|MEKK1|Mekk	mitogen-activated protein kinase kinase kinase 1	protein-coding
common_peak2-23809-13-18--0.469455482805817-0.409888142029227	chr15	100551306	100552085	+	0	NA	promoter-TSS (NM_001161768)	promoter-TSS (NM_001161768)	-787	NM_001161768	207839	Mm.22969	NM_172451		Galnt6	4632410F13|AW047994|GalNAc-T6	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6	protein-coding
unique_peak2-39334-1-5--2.2120195109379-1.32905871926422	chr8	127518878	127519261	+	0	NA	Intergenic	(TTC)n|Simple_repeat|Simple_repeat	-17828	NM_016909	53424	Mm.5248	NM_016909	ENSMUSG00000056820	Tsnax	R74833|Trax	translin-associated factor X	protein-coding
unique_peak1-382-15-3-2.01216475055566-3.03427613622886	chr1	152614445	152615200	+	0	NA	intron (NM_001024720, intron 14 of 106)	B1_Mur3|SINE|Alu	225743	NM_001024720	545370	Mm.379425	NM_001024720	ENSMUSG00000066842	Hmcn1	EG545370|Gm201	hemicentin 1	protein-coding
common_peak2-28871-11-11--0.0762689164695427-0.301029995663976	chr5	76884258	76884794	+	0	NA	Intergenic	Intergenic	-28576	NR_033501	639545	Mm.478255	NR_033501		Gm7271	EG639545	predicted gene 7271	pseudo
unique_peak1-5643-21-3-2.56948926526624-4.33845181153635	chr6	24554055	24555158	+	0	NA	exon (NM_053098, exon 2 of 3)	exon (NM_053098, exon 2 of 3)	6835	NM_053098	93677	Mm.332941	NM_053098	ENSMUSG00000029683	Lmod2	C-Lmod	leiomodin 2 (cardiac)	protein-coding
common_peak1-9375-71-94-0.0745885703890234-0.34133178638415	chr11	98201859	98203437	+	0	NA	Intergenic	Intergenic	-7404	NM_144828	19049	Mm.45372	NM_144828	ENSMUSG00000061718	Ppp1r1b	AU040756|DARPP-32|Darpp32	protein phosphatase 1, regulatory (inhibitor) subunit 1B	protein-coding
unique_peak2-37825-6-9--0.75652998450706-1.11707584880836	chr5	130002690	130003182	+	0	NA	Intergenic	RLTR28B|LTR|ERVL	-4170	NM_172276	231769	Mm.288714	NM_172276	ENSMUSG00000029439	Sfswap	1190005N23Rik|6330437E22Rik|AI197402|AW212079|SWAP|Sfrs8|Srsf8	splicing factor, suppressor of white-apricot homolog (Drosophila)	protein-coding
common_peak2-28078-6-6--0.241956811677302-0.947717972411649	chr4	82470647	82471167	+	0	NA	intron (NM_026647, intron 6 of 8)	intron (NM_026647, intron 6 of 8)	34658	NM_026647	68268	Mm.32047	NM_026647	ENSMUSG00000028403	Zdhhc21	9130404H11Rik|AL024349|D130004H04Rik|dep	zinc finger, DHHC domain containing 21	protein-coding
common_peak2-32311-21-59--1.33740133034228-3.60837645652533	chrX	52987963	52988717	+	0	NA	Intergenic	L1_Mm|LINE|L1	183567	NM_001220497	100039055	Mm.380174	NM_001220497		Gm16404	EG625711	predicted gene 16404	protein-coding
common_peak1-10842-82-103-0.192823426164643-0.551651255369988	chr14	105894653	105897160	+	0	NA	Intergenic	ORR1A0|LTR|MaLR	-2099	NR_045921	74864	Mm.159344	NR_045921	ENSMUSG00000022116	4930449E01Rik	-	RIKEN cDNA 4930449E01 gene	ncRNA
common_peak1-16636-23-34--0.407515512435886-0.533344939162177	chr6	48840256	48841157	+	0	NA	Intergenic	RMER15|LTR|ERVL	-4548	NM_029638	76507	Mm.213898	NM_029638	ENSMUSG00000029811	Aoc1	1600012D06Rik|Abp1|DAO	amine oxidase, copper-containing 1	protein-coding
unique_peak1-2764-44-8-2.65196783312622-9.33819820130472	chr17	5821701	5823315	+	0	NA	Intergenic	Intergenic	-18872	NM_025664	66616	Mm.89515	NM_025664	ENSMUSG00000002365	Snx9	2700073N08Rik|SDP1|SH3PX1	sorting nexin 9	protein-coding
common_peak1-19199-61-81-0.0251973251312565-0.306326401119212	chr9	101073040	101075253	+	0	NA	intron (NM_172144, intron 5 of 12)	L1MA5|LINE|L1	27257	NM_172144	235542	Mm.335386	NM_172144	ENSMUSG00000043154	Ppp2r3a	3222402P14Rik|A730042E07	protein phosphatase 2, regulatory subunit B'', alpha	protein-coding
unique_peak1-6886-7-3-0.799090830298189-1.23214870625617	chr8	93946731	93947154	+	0	NA	intron (NM_011936, intron 3 of 8)	L1Md_T|LINE|L1	109518	NM_011936	26383	Mm.4375	NM_011936	ENSMUSG00000055932	Fto	AW743446|mKIAA1752	fat mass and obesity associated	protein-coding
common_peak2-20714-26-53--0.826988410005006-1.70329669899196	chr10	94545017	94546637	+	0	NA	Intergenic	Intergenic	-138615	NM_018797	54712	Mm.256712	NM_018797	ENSMUSG00000074785	Plxnc1	2510048K12Rik|AW742158|CD232|Vespr	plexin C1	protein-coding
unique_peak1-3684-16-6-1.31090872021046-1.49151883326344	chr19	42533055	42533901	+	0	NA	Intergenic	Intergenic	-27205	NM_145123	72832	Mm.313558	NM_145123	ENSMUSG00000042401	Crtac1	2810454P21Rik|AW047536|Crtac1B|Lotus	cartilage acidic protein 1	protein-coding
common_peak1-11686-72-138--0.45035725985119-1.47806238732017	chr16	30387771	30389631	+	0	NA	promoter-TSS (NM_001128096)	promoter-TSS (NM_001128096)	-85	NM_001128096	224088	Mm.8924	NM_001128094	ENSMUSG00000022533	Atp13a3	AU022875|Gm1745|Gm541|Gm542	ATPase type 13A3	protein-coding
unique_peak2-35205-4-5--0.608423014574403-0.909929411522249	chr16	84774457	84774779	+	0	NA	5' UTR (NM_023844, exon 1 of 10)	5' UTR (NM_023844, exon 1 of 10)	250	NM_023844	67374	Mm.41758	NM_023844	ENSMUSG00000053062	Jam2	1110002N23Rik|2410030G21Rik|2410167M24Rik|JAM-2|JAM-B|Jcam2|VE-JAM	junction adhesion molecule 2	protein-coding
common_peak1-13190-79-41-1.43651774439786-8.07055728505288	chr19	20388989	20391161	+	0	NA	Intergenic	L1Md_F2|LINE|L1	75086	NM_010730	16952	Mm.248360	NM_010730	ENSMUSG00000024659	Anxa1	Anx-1|Anx-A1|C430014K04Rik|Lpc-1|Lpc1	annexin A1	protein-coding
unique_peak2-32723-2-8--2.08737925770563-1.65811743852845	chr1	161727157	161727684	+	0	NA	intron (NM_022312, intron 2 of 22)	intron (NM_022312, intron 2 of 22)	-247091	NR_028111	67647	Mm.171518	NM_001024470	ENSMUSG00000090394	4930523C07Rik	-	RIKEN cDNA 4930523C07 gene	protein-coding
unique_peak2-32743-6-13--1.2419568116773-1.58711810488664	chr1	166136437	166137022	+	0	NA	intron (NM_007976, intron 17 of 24)	intron (NM_007976, intron 17 of 24)	-42448	NM_054087	116914	Mm.35444	NM_054087	ENSMUSG00000040918	Slc19a2	AV276020|AW322295|DDA1|THTR1|TRMA	solute carrier family 19 (thiamine transporter), member 2	protein-coding
common_peak1-11146-8-8--0.164702583494742-1.00793137938329	chr15	73511625	73512148	+	0	NA	Intergenic	Intergenic	26049	NM_173365	239530	Mm.122997	NM_173365	ENSMUSG00000045281	Gpr20	A430106B11Rik	G protein-coupled receptor 20	protein-coding
unique_peak1-3820-19-2-2.81772482594053-4.27364484827118	chr2	90554201	90555144	+	0	NA	intron (NM_021512, intron 24 of 36)	intron (NM_021512, intron 24 of 36)	-30855	NM_018828	55935	Mm.489638	NM_018828	ENSMUSG00000008200	Fnbp4	FBP30|Fnbp30|mKIAA1014	formin binding protein 4	protein-coding
common_peak1-18092-15-12-0.311725032414564-0.425539671739611	chr8	106577416	106577949	+	0	NA	Intergenic	MTB_Mm|LTR|MaLR	-47843	NM_009868	12562	Mm.21767	NM_009868	ENSMUSG00000031871	Cdh5	7B4|AA408225|Cd144|VE-Cad|VECD|VEcad|Vec	cadherin 5	protein-coding
unique_peak2-34293-3-6--1.22133801201688-1.08602067057793	chr13	75367835	75368148	+	0	NA	Intergenic	Intergenic	140556	NM_013628	18548	Mm.1333	NM_013628	ENSMUSG00000021587	Pcsk1	Nec-1|Nec1|PC1|PC3|Phpp-1|SPC3	proprotein convertase subtilisin/kexin type 1	protein-coding
unique_peak2-36720-8-14--0.901668177660948-0.660903317613906	chr3	52257895	52258483	+	0	NA	Intergenic	Intergenic	185930	NM_019739	56458	Mm.29891	NM_019739	ENSMUSG00000044167	Foxo1	AI876417|Afxh|FKHR|Fkhr1|Foxo1a	forkhead box O1	protein-coding
common_peak2-23033-23-15-0.721767504509081-0.949797625454541	chr14	66104400	66105060	+	0	NA	Intergenic	Intergenic	-60421	NM_010932	18155	Mm.16347	NM_010932	ENSMUSG00000045731	Pnoc	N/OFQ|N23K|Npnc1|OFQ/N	prepronociceptin	protein-coding
unique_peak1-2786-9-5-0.604650905683064-1.21398586181642	chr17	12208098	12208593	+	0	NA	intron (NM_016694, intron 10 of 11)	L1Md_A|LINE|L1	-103805	NM_026644	68262	Mm.258300	NM_026644	ENSMUSG00000023827	Agpat4	1500003P24Rik	1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)	protein-coding
common_peak1-10356-37-78--0.777787676691284-2.11469976509036	chr13	85288127	85289367	+	0	NA	Intergenic	Lx7|LINE|L1	-40335	NM_023243	66671	Mm.18474	NM_023243	ENSMUSG00000021548	Ccnh	6330408H09Rik|AI661354|AV102684|AW538719	cyclin H	protein-coding
unique_peak1-2717-9-3-1.18961340640422-1.57096726280955	chr16	92209524	92210041	+	0	NA	Intergenic	Intergenic	-82852	NM_134110	246133	Mm.156736	NM_134110	ENSMUSG00000039672	Kcne2	2200002I16Rik|AW048273|MiRP1	potassium voltage-gated channel, Isk-related subfamily, gene 2	protein-coding
common_peak1-8749-28-10-1.59352750118417-3.11713623526325	chr11	4307945	4308872	+	0	NA	intron (NM_029458, intron 10 of 10)	intron (NM_029458, intron 10 of 10)	32677	NM_029458	75828	Mm.159592	NM_029458	ENSMUSG00000020419	Hormad2	4930529M09Rik	HORMA domain containing 2	protein-coding
common_peak2-29190-14-11-0.314253659636488-0.435191258261915	chr5	135688221	135688780	+	0	NA	intron (NM_011714, intron 6 of 18)	intron (NM_011714, intron 6 of 18)	25307	NM_011714	22385	Mm.40331	NM_011714	ENSMUSG00000002748	Baz1b	C87820|WSTF|Wbscr9	bromodomain adjacent to zinc finger domain, 1B	protein-coding
unique_peak1-2519-6-4-0.24347001549294-0.989110657569874	chr16	20369955	20370416	+	0	NA	intron (NM_013790, intron 17 of 29)	RMER10A|LTR|ERVL	-44708	NM_183158	224044	Mm.276400	NM_183158	ENSMUSG00000022818	Cyp2ab1	EG224044|F730023N20	cytochrome P450, family 2, subfamily ab, polypeptide 1	protein-coding
common_peak2-23372-29-7-2.11229008061511-4.7258874491988	chr15	55121250	55121715	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-17823	NM_181277	12818	Mm.297859	NM_181277	ENSMUSG00000022371	Col14a1	5730412L22Rik|AW108078	collagen, type XIV, alpha 1	protein-coding
common_peak2-20064-22-30--0.30691220529947-0.399869693390336	chr1	152902817	152903472	+	0	NA	Intergenic	Intergenic	-62579	NM_001024720	545370	Mm.379425	NM_001024720	ENSMUSG00000066842	Hmcn1	EG545370|Gm201	hemicentin 1	protein-coding
common_peak2-28141-23-33--0.365695336741259-0.481798116163913	chr4	98400617	98402017	+	0	NA	intron (NM_001081202, intron 3 of 4)	B3A|SINE|B2	7872	NM_001081202	381591	Mm.34340	NM_001081202	ENSMUSG00000087166	L1td1	AA546746|AB211064|D76865|ECAT11	LINE-1 type transposase domain containing 1	protein-coding
common_peak1-16826-17-10-0.75886471956774-0.917676348953458	chr6	49319268	49319917	+	0	NA	intron (NM_001172216, intron 1 of 5)	PB1D10|SINE|Alu	1854	NM_172727	231946	Mm.35199	NM_172727	ENSMUSG00000047115	Fam221a	D330028D13Rik	family with sequence similarity 221, member A	protein-coding
common_peak2-24977-26-25-0.22745937401737-0.399869693390336	chr18	6760397	6761162	+	0	NA	Intergenic	Intergenic	-4386	NM_181070	19330	Mm.132802	NM_181070		Rab18	AA959686	RAB18, member RAS oncogene family	protein-coding
unique_peak1-312-17-2-2.63333383748388-3.75443312462699	chr1	131083627	131084311	+	0	NA	Intergenic	L2|LINE|L2	-85912	NM_172485	210417	Mm.380518	NM_172485	ENSMUSG00000042581	Thsd7b	1700074E13Rik|B930082A18|D130067I03Rik	thrombospondin, type I, domain containing 7B	protein-coding
common_peak2-22328-12-20--0.743541437691122-0.625923329873571	chr13	23542826	23543469	+	0	NA	Intergenic	Intergenic	14623	NM_013483	12231	Mm.1420	NM_013483	ENSMUSG00000000706	Btn1a1	Btn	butyrophilin, subfamily 1, member A1	protein-coding
common_peak2-29372-20-35--0.681850216851119-0.950553505527076	chr6	38534628	38535455	+	0	NA	exon (NM_138680, exon 3 of 10)	exon (NM_138680, exon 3 of 10)	33597	NM_001170848	192196	Mm.276133	NM_138680	ENSMUSG00000029823	Luc7l2	4930471C18Rik|AA522013|AU015269|CGI59|Cgi74	LUC7-like 2 (S. cerevisiae)	protein-coding
common_peak1-8644-27-48--0.623163893219973-1.00060938969219	chr10	126927687	126928850	+	0	NA	intron (NM_027900, intron 19 of 23)	intron (NM_027900, intron 19 of 23)	-10505	NM_177707	237611	Mm.32087	NM_177707	ENSMUSG00000040287	Stac3	9830125E18	SH3 and cysteine rich domain 3	protein-coding
common_peak1-14868-48-70--0.178819968269868-0.381068586924698	chr3	95650051	95651684	+	0	NA	intron (NM_027541, intron 6 of 15)	B1_Mus1|SINE|Alu	8809	NM_027541	70767	Mm.279872	NM_027541	ENSMUSG00000015748	Prpf3	3632413F13Rik	PRP3 pre-mRNA processing factor 3 homolog (yeast)	protein-coding
unique_peak2-33701-4-8--1.19338551529556-1.21878474469819	chr11	108303504	108303967	+	0	NA	intron (NM_029606, intron 5 of 27)	(TCTG)n|Simple_repeat|Simple_repeat	17155	NM_029606	76380	Mm.344071	NM_029586	ENSMUSG00000020728	Cep112	1700001M19Rik|1700029K01Rik|8430407H02Rik|AV043680|AV207351|Ccdc46|Macoco	centrosomal protein 112	protein-coding
unique_peak2-38603-8-7-0.00522241794757061-1.00793137938329	chr7	79782161	79782667	+	0	NA	Intergenic	Intergenic	-330933	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding
common_peak1-17411-89-129-0.0125989417975481-0.304370755394625	chr7	5013960	5015917	+	0	NA	intron (NM_001205231, intron 1 of 11)	intron (NM_001205231, intron 1 of 11)	1193	NM_001205231	22185	Mm.360389	NM_133671	ENSMUSG00000030435	U2af2	65kDa	U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2	protein-coding
common_peak2-21087-13-12-0.0780323124966764-0.334470287753051	chr11	51262475	51263011	+	0	NA	intron (NM_153393, intron 2 of 28)	intron (NM_153393, intron 2 of 28)	-135516	NM_028398	72947	Mm.256875	NM_028398		Phykpl	2900006B13Rik|Agxt2l2	5-phosphohydroxy-L-lysine phospholyase	protein-coding
unique_peak1-4300-11-4-1.18676548936425-1.68134727924692	chr2	146062028	146062719	+	0	NA	Intergenic	Intergenic	14640	NM_016889	53626	Mm.379070	NM_016889	ENSMUSG00000068154	Insm1	IA-1	insulinoma-associated 1	protein-coding
common_peak2-23721-20-28--0.369906210536379-0.457753417732779	chr15	93274658	93275203	+	0	NA	intron (NM_001083114, intron 4 of 7)	intron (NM_001083114, intron 4 of 7)	46035	NM_001285863	223828	Mm.74208	NM_146062	ENSMUSG00000036167	Pphln1	CR|HSPC206|HSPC232	periphilin 1	protein-coding
unique_peak1-6542-8-2-1.42025991722641-1.65811743852845	chr7	126923808	126924146	+	0	NA	intron (NM_212442, intron 11 of 14)	intron (NM_212442, intron 11 of 14)	13595	NM_027698	71151	Mm.274160	NM_027698	ENSMUSG00000030929	Eri2	4933424N09Rik|Exod1|mKIAA1504	exoribonuclease 2	protein-coding
common_peak1-19078-32-36-0.0696386535907099-0.327094617740873	chr9	70542631	70543703	+	0	NA	intron (NM_007399, intron 1 of 15)	intron (NM_007399, intron 1 of 15)	16359	NM_007399	11487	Mm.3037	NM_007399	ENSMUSG00000054693	Adam10	1700031C13Rik|MADM|kuz|kuzbanian	a disintegrin and metallopeptidase domain 10	protein-coding
common_peak2-24604-15-13-0.204809828498052-0.368541233333383	chr17	32891062	32891739	+	0	NA	Intergenic	RLTR9A|LTR|ERVK	33832	NM_172458	208292	Mm.38813	NM_172458		Zfp871	4732483N19|9030612M13Rik|AI118577|AI265322|mKIAA3006	zinc finger protein 871	protein-coding
unique_peak1-1460-10-5-0.771452844287613-1.33892459842472	chr12	108392826	108393330	+	0	NA	Intergenic	Intergenic	-438544	NR_015512	71033	Mm.159404	NR_015512	ENSMUSG00000085820	4933406K04Rik	4930426M03Rik|4930485I22Rik|4933427G14Rik	RIKEN cDNA 4933406K04 gene	ncRNA
unique_peak1-2476-7-1-1.79909083029819-1.80617997398389	chr16	4028862	4029387	+	0	NA	Intergenic	Intergenic	-8021	NM_010061	13419	Mm.440565	NM_010061	ENSMUSG00000005980	Dnase1	AI788650|DNaseI|Dnl1	deoxyribonuclease I	protein-coding
unique_peak1-5295-8-0-3.00522241794757-2.70926996097583	chr5	67821222	67821738	+	0	NA	Intergenic	MLT1A1|LTR|MaLR	-2442	NM_001164806	666938	Mm.101339	NM_001164806	ENSMUSG00000092060	Bend4	D330027G24Rik|EG666938	BEN domain containing 4	protein-coding
common_peak1-8092-11-13--0.298661337805991-0.337263207250336	chr1	180850350	180850938	+	0	NA	intron (NM_001161665, intron 12 of 14)	intron (NM_001161665, intron 12 of 14)	391388	NM_001161665	269152	Mm.129727	NM_177724	ENSMUSG00000026494	Kif26b	4832420M10|BC056349|D230039L06Rik	kinesin family member 26B	protein-coding
common_peak2-27865-25-61--1.09234640504177-2.82656563060959	chr3	158031198	158032048	+	0	NA	intron (NM_001291453, intron 3 of 25)	intron (NM_001291453, intron 3 of 25)	193562	NM_001291453	242274	Mm.132162	NM_001081358	ENSMUSG00000028176	Lrrc7	AK122498|densin|mKIAA1365	leucine rich repeat containing 7	protein-coding
unique_peak1-2991-9-1-2.18961340640422-2.31132995230379	chr17	79832831	79833240	+	0	NA	Intergenic	MLT1B|LTR|MaLR	44190	NR_033463	74622	Mm.311921	NR_033463		4930429F11Rik	-	RIKEN cDNA 4930429F11 gene	ncRNA
unique_peak1-1720-8-0-3.00522241794757-2.70926996097583	chr13	95865705	95866184	+	0	NA	intron (NM_172263, intron 5 of 19)	intron (NM_172263, intron 5 of 19)	119645	NM_172590	218460	Mm.33856	NM_172590	ENSMUSG00000042015	Wdr41	B830029I03Rik|MSTP048	WD repeat domain 41	protein-coding
unique_peak1-7382-24-2-3.20824740204656-6.14077709290365	chrX	75744121	75745079	+	0	NA	intron (NM_027322, intron 2 of 3)	Lx8|LINE|L1	84544	NM_001164275	546336	Mm.211712	NM_027322	ENSMUSG00000047996	Prrg1	2010007L08Rik	proline rich Gla (G-carboxyglutamic acid) 1	protein-coding
common_peak1-10447-19-30--0.551508983725189-0.647723624534446	chr13	106936196	106936919	+	0	NA	Intergenic	L1MA4A|LINE|L1	702784	NM_008308	15550	Mm.4716	NM_008308	ENSMUSG00000021721	Htr1a	Gpcr18	5-hydroxytryptamine (serotonin) receptor 1A	protein-coding
common_peak2-24439-6-12--1.13504160776079-1.45089835786865	chr17	21650152	21650560	+	0	NA	Intergenic	Lx9|LINE|L1	-22147	NM_144515	22710	Mm.296100	NM_144515		Zfp52	KRAB11|Zfp-52|Zfp76|mszf23-2|mszf24|mszf34|mszf75|zfec29	zinc finger protein 52	protein-coding
common_peak2-20919-29-33-0.0248272393647717-0.313805205020552	chr11	5955303	5956265	+	0	NA	intron (NM_001174053, intron 1 of 19)	L1MB7|LINE|L1	9967	NM_001174054	12323	Mm.439733	NM_007595	ENSMUSG00000057897	Camk2b	Camk2d	calcium/calmodulin-dependent protein kinase II, beta	protein-coding
common_peak2-30491-8-5-0.420259917226415-1.10484139239135	chr7	58823350	58823722	+	0	NA	intron (NM_001271879, intron 11 of 20)	L1Md_F2|LINE|L1	-53664	NM_080853	140919	Mm.256618	NM_080853	ENSMUSG00000030500	Slc17a6	2900073D12Rik|DNPI|VGLUT2	solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6	protein-coding
unique_peak1-690-8-4-0.683294323060208-1.21878474469819	chr10	79851521	79851940	+	0	NA	Intergenic	Intergenic	-1334	NM_198615	237400	Mm.268389	NM_198615	ENSMUSG00000048696	Mex3d	BC059858|Rkhd1	mex3 homolog D (C. elegans)	protein-coding
unique_peak1-6726-8-2-1.42025991722641-1.65811743852845	chr8	44156248	44156677	+	0	NA	Intergenic	Lx8|LINE|L1	70378	NM_177742	244448	Mm.64542	NM_177742	ENSMUSG00000031651	Triml1	4933403D14|BC050188	tripartite motif family-like 1	protein-coding
unique_peak1-1339-14-2-2.31425365963649-3.28500101358144	chr12	12022938	12023544	+	0	NA	Intergenic	MLT1E1A-int|LTR|MaLR	-133536	NR_003964	627110	Mm.194735	NR_003964		Tubb2a-ps2	C79445	tubulin, beta 2a, pseudogene 2	pseudo
unique_peak1-7367-12-0-3.64877598508764-4.21441993929574	chrX	48010219	48010766	+	0	NA	Intergenic	Intergenic	-22057	NR_026976	103012	Mm.482523	NR_015505		Firre	5830467J12Rik|6720401G13Rik|AW048145	functional intergenic repeating RNA element	ncRNA
unique_peak2-33670-2-6--1.72480917832092-1.26211192963361	chr11	101246227	101246570	+	0	NA	Intergenic	RMER17C|LTR|ERVK	17354	NM_008061	14377	Mm.18064	NM_008061	ENSMUSG00000078650	G6pc	AW107337|G6Pase|G6pt|Glc-6-Pase	glucose-6-phosphatase, catalytic	protein-coding
common_peak1-12310-45-36-0.650904659715922-1.42954500397923	chr17	47293130	47294670	+	0	NA	intron (NM_001097623, intron 3 of 19)	MIRb|SINE|MIR	16009	NM_001097623	224829	Mm.260989	NM_172622	ENSMUSG00000064043	Trerf1	9430096I18Rik|AI429294|B830015H24|RAPA|Trep-132|Trep132	transcriptional regulating factor 1	protein-coding
unique_peak2-39492-3-5--0.998945590680433-0.96108193396963	chr9	58979073	58979450	+	0	NA	Intergenic	ORR1D2|LTR|MaLR	-95013	NM_001042752	18007	Mm.42249	NM_008684	ENSMUSG00000032340	Neo1	2610028H22Rik|AI327052|D930014N22Rik|Igdcc2	neogenin	protein-coding
common_peak2-23569-8-15--0.994777582052429-0.771068449301683	chr15	79402609	79403359	+	0	NA	intron (NR_103477, intron 7 of 8)	B4A|SINE|B4	-25813	NM_199080	67040	Mm.29644	NM_152806	ENSMUSG00000055065	Ddx17	2610007K22Rik|A430025E01Rik|AI047725|C80929|Gm926|p72	DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	protein-coding
common_peak2-24653-18-14-0.406028555619833-0.532159081577619	chr17	35666928	35667512	+	0	NA	exon (NM_146248, exon 16 of 18)	exon (NM_146248, exon 16 of 18)	-2926	NM_020576	57390	Mm.34201	NM_020576	ENSMUSG00000024409	Psors1c2	AI448740|Pcg|SPR1	psoriasis susceptibility 1 candidate 2 (human)	protein-coding
common_peak2-29423-37-31-0.525993071485819-0.939626589724289	chr6	6216476	6217313	+	0	NA	Intergenic	RMER5|LTR|ERV1	-49721	NM_001177572	50799	Mm.24513	NM_015829	ENSMUSG00000015112	Slc25a13	AI785475|Ctrn	solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 13	protein-coding
unique_peak2-36820-7-6--0.00826409175941478-0.97990265578305	chr3	88144518	88144932	+	0	NA	intron (NM_178246, intron 1 of 21)	intron (NM_178246, intron 1 of 21)	4543	NM_178246	229512	Mm.439830	NM_173188	ENSMUSG00000001415	Smg5	BC024683|mKIAA1089	Smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans)	protein-coding
common_peak2-27549-14-49--1.74464002941708-4.4324081904224	chr3	96262034	96263465	+	0	NA	Intergenic	CpG	-6520	NM_001256180	329716	Mm.275223	NM_183223	ENSMUSG00000046317	BC107364	D730018G16	cDNA sequence BC107364	protein-coding
common_peak1-15080-25-33--0.225612935905233-0.357106932979091	chr3	127552864	127553593	+	0	NA	Intergenic	Lx8|LINE|L1	-12818	NM_145964	211556	Mm.403486	NM_145964	ENSMUSG00000074238	Ap1ar	AA407621|C78909|Gadkin	adaptor-related protein complex 1 associated regulatory protein	protein-coding
common_peak2-27083-25-67--1.22561293590523-3.6584249276327	chr3	75955828	75956999	+	0	NA	intron (NM_001253719, intron 2 of 15)	L1Md_F2|LINE|L1	76908	NM_001253719	213262	Mm.379337	NM_178673	ENSMUSG00000034098	Fstl5	9130207J01Rik	follistatin-like 5	protein-coding
unique_peak2-36872-3-11--1.99894559068043-1.95434855131066	chr3	93556542	93556939	+	0	NA	Intergenic	L1Md_F|LINE|L1	-43580	NM_207272	399675	Mm.377924	NM_207272	ENSMUSG00000060256	Tdpoz4	-	TD and POZ domain containing 4	protein-coding
unique_peak1-6410-18-1-3.31291915122835-4.8766546284749	chr7	82192537	82193358	+	0	NA	Intergenic	MER58B|DNA|MER1_type	260325	NM_001109753	64176	Mm.273082	NM_153579	ENSMUSG00000053025	Sv2b	A830038F04Rik|AI850768|mKIAA0735	synaptic vesicle glycoprotein 2 b	protein-coding
unique_peak1-5701-9-0-3.18961340640422-3.01029995663981	chr6	35331368	35331789	+	0	NA	Intergenic	Intergenic	50732	NR_040526	73409	Mm.69443	NR_040526		1700065J11Rik	-	RIKEN cDNA 1700065J11 gene	ncRNA
common_peak1-9725-9-20--1.20270401637454-1.23014042908325	chr12	32954252	32954781	+	0	NA	Intergenic	L1_Mur1|LINE|L1	-61002	NM_001146200	30955	Mm.101369	NM_020272	ENSMUSG00000020573	Pik3cg	5830428L06Rik|PI3Kgamma|p110gamma	phosphoinositide-3-kinase, catalytic, gamma polypeptide	protein-coding
common_peak2-20621-25-35--0.308075096097206-0.423354874519378	chr10	80249194	80250025	+	0	NA	intron (NM_199322, intron 21 of 27)	intron (NM_199322, intron 21 of 27)	11762	NM_023900	78670	Mm.41479	NM_023900	ENSMUSG00000035278	Plekhj1	9530063M10Rik	pleckstrin homology domain containing, family J member 1	protein-coding
common_peak2-28012-15-14-0.105274154947137-0.330004445983672	chr4	46560007	46560583	+	0	NA	intron (NM_178893, intron 5 of 12)	MTB_Mm|LTR|MaLR	-11282	NM_029077	74735	Mm.240252	NM_029077	ENSMUSG00000039853	Trim14	5830400N10Rik|pub	tripartite motif-containing 14	protein-coding
common_peak2-28666-60-96--0.245620980566597-0.54038308013283	chr5	31629143	31631504	+	0	NA	TTS (NM_144909)	TTS (NM_144909)	30369	NM_144909	231103	Mm.100043	NM_144909	ENSMUSG00000059434	Gckr	GKRP	glucokinase regulatory protein	protein-coding
unique_peak2-38110-5-7--0.704380336005853-1.01466476204226	chr6	72310497	72310918	+	0	NA	TTS (NM_144916)	TTS (NM_144916)	1668	NM_025607	66510	Mm.170023	NM_025607	ENSMUSG00000055850	Rnf181	1700047F16Rik|2500002L14Rik|6230415N01Rik|C77350	ring finger protein 181	protein-coding
common_peak2-24109-18-32--0.731474968130102-0.907815120698057	chr16	32803103	32804392	+	0	NA	Intergenic	Intergenic	-6226	NM_001145874	224116	Mm.153301	NM_146071	ENSMUSG00000035638	Muc20	BC026367	mucin 20	protein-coding
unique_peak1-4323-23-7-1.72176750450908-2.82905316394614	chr2	151525808	151526721	+	0	NA	Intergenic	L2b|LINE|L2	-1480	NM_001160363	108832	Mm.103494	NM_001160363	ENSMUSG00000044364	Tmem74b	5430405G05Rik	transmembrane protein 74B	protein-coding
common_peak2-26735-9-28--1.66836758872335-2.52428350728854	chr2	131909883	131910431	+	0	NA	intron (NM_018824, intron 5 of 15)	intron (NM_018824, intron 5 of 15)	-54433	NM_175445	215653	Mm.204737	NM_175445	ENSMUSG00000027339	Rassf2	3830431H01Rik|9030412M04Rik|AI852669|AW495050	Ras association (RalGDS/AF-6) domain family member 2	protein-coding
common_peak2-21136-36-47--0.105641414553402-0.310471923828336	chr11	54786723	54787732	+	0	NA	Intergenic	Intergenic	-10785	NM_001271455	57783	Mm.259671	NM_021327	ENSMUSG00000020400	Tnip1	ABIN|ABIN-1|ABIN1|AU018810|Naf1|Nef|VAN	TNFAIP3 interacting protein 1	protein-coding
common_peak2-23737-14-9-0.577288065470282-0.630231561310125	chr15	97499427	97499922	+	0	NA	Intergenic	(TCCCC)n|Simple_repeat|Simple_repeat	36579	NM_028003	71919	Mm.12255	NM_028003	ENSMUSG00000022466	Rpap3	2310042P20Rik|D15Ertd682e	RNA polymerase II associated protein 3	protein-coding
common_peak2-24918-30-73--1.03977795613708-3.08327006392556	chr17	87169282	87170626	+	0	NA	intron (NM_010137, intron 1 of 15)	intron (NM_010137, intron 1 of 15)	16750	NM_010137	13819	Mm.1415	NM_010137	ENSMUSG00000024140	Epas1	HIF-2alpha|HIF2A|HLF|HRF|MOP2|bHLHe73	endothelial PAS domain protein 1	protein-coding
unique_peak1-1973-10-2-1.77145284428761-2.09384600808989	chr14	120288947	120289327	+	0	NA	Intergenic	Intergenic	140688	NR_045621	75432	Mm.443277	NR_045621		1700006F04Rik	-	RIKEN cDNA 1700006F04 gene	ncRNA
unique_peak1-3296-9-4-0.867685311516858-1.36011389749466	chr18	75408304	75408797	+	0	NA	intron (NM_027727, intron 16 of 16)	intron (NM_027727, intron 16 of 16)	48421	NR_045394	100503117	Mm.250517	NR_045393		2010010A06Rik	5033420E22Rik	RIKEN cDNA 2010010A06 gene	ncRNA
common_peak2-29667-52-33-1.02079714901536-3.12041931051542	chr6	72272337	72274046	+	0	NA	intron (NM_138592, intron 10 of 12)	intron (NM_138592, intron 10 of 12)	18587	NM_147779	20388	Mm.46033	NM_147779	ENSMUSG00000056370	Sftpb	AI562151|SF-B|SP-B|Sftp-3|Sftp3	surfactant associated protein B	protein-coding
unique_peak2-38713-1-5--2.2120195109379-1.32905871926422	chr7	110659680	110660111	+	0	NA	Intergenic	Intergenic	-4437	NM_147081	259085	Mm.377830	NM_147081	ENSMUSG00000045584	Olfr610	MOR9-2	olfactory receptor 610	protein-coding
unique_peak1-3639-9-0-3.18961340640422-3.01029995663981	chr19	38049122	38049631	+	0	NA	exon (NM_001099634, exon 14 of 53)	exon (NM_001099634, exon 14 of 53)	68691	NM_001099634	226101	Mm.34674	NM_177035	ENSMUSG00000048612	Myof	2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3	myoferlin	protein-coding
unique_peak2-36229-3-6--1.22133801201688-1.08602067057793	chr2	35696206	35696521	+	0	NA	intron (NM_029774, intron 6 of 9)	intron (NM_029774, intron 6 of 9)	21653	NR_040618	77665	Mm.400558	NR_040618	ENSMUSG00000086449	9030204H09Rik	-	RIKEN cDNA 9030204H09 gene	ncRNA
unique_peak1-3959-9-3-1.18961340640422-1.57096726280955	chr2	30760040	30760547	+	0	NA	Intergenic	RSINE1|SINE|B4	-1476	NM_022415	64292	Mm.28768	NM_022415	ENSMUSG00000050737	Ptges	2410099E23Rik|D2Ertd369e|Pges|mPGES|mPGES-1	prostaglandin E synthase	protein-coding
common_peak1-13612-23-16-0.634304663258741-0.82304638657543	chr2	21235303	21236253	+	0	NA	Intergenic	MLT2B1|LTR|ERVL	-53416	NM_001004761	241263	Mm.166647	NM_175706	ENSMUSG00000045967	Gpr158	5330427M13Rik|mKIAA1136	G protein-coupled receptor 158	protein-coding
unique_peak2-37748-2-5--1.50241675698448-1.08602067057793	chr5	110916977	110917213	+	0	NA	Intergenic	L2a|LINE|L2	-26847	NR_102290	231603	Mm.22836	NM_173766	ENSMUSG00000048215	A630023P12Rik	-	RIKEN cDNA A630023P12 gene	ncRNA
unique_peak1-3920-6-3-0.565398110380302-1.08602067057793	chr2	25363947	25364415	+	0	NA	Intergenic	RMER17C|LTR|ERVK	-6942	NM_001271777	69379	Mm.24596	NM_027062	ENSMUSG00000015083	C8g	-	complement component 8, gamma polypeptide	protein-coding
common_peak1-15547-19-34--0.72659569028328-0.974620203848502	chr4	121214350	121215315	+	0	NA	Intergenic	Intergenic	79898	NM_001099309	666927	Mm.465133	NM_001099309		Gm12887	OTTMUSG00000008910	predicted gene 12887	protein-coding
unique_peak1-5303-12-4-1.32684789020028-2.04196296489515	chr5	74792074	74792694	+	0	NA	intron (NM_001286437, intron 5 of 7)	intron (NM_001286437, intron 5 of 7)	135383	NM_178672	212986	Mm.134147	NM_178672	ENSMUSG00000062110	Scfd2	E430013M20Rik|STXBP1L1	Sec1 family domain containing 2	protein-coding
unique_peak2-38886-6-11--1.01956439034085-1.32595962126035	chr8	4252904	4253640	+	0	NA	exon (NM_133968, exon 1 of 5)	exon (NM_133968, exon 1 of 5)	170	NM_133968	102209	Mm.28452	NM_133968	ENSMUSG00000011837	Snapc2	0610007H10Rik|AU015675	small nuclear RNA activating complex, polypeptide 2	protein-coding
common_peak1-8261-14-20--0.493101262421116-0.456667090758524	chr10	21994119	21994800	+	0	NA	intron (NM_001177775, intron 1 of 5)	intron (NM_001177775, intron 1 of 5)	1179	NM_001177775	667281	Mm.484254	NM_001177775	ENSMUSG00000075297	H60b	EG667281	histocompatibility 60b	protein-coding
unique_peak2-39672-6-7--0.434601889619698-0.97990265578305	chr9	108144193	108144600	+	0	NA	intron (NM_001276485, intron 1 of 2)	intron (NM_001276485, intron 1 of 2)	21750	NM_010017	13138	Mm.7524	NM_010017		Dag1	D9Wsu13e|DG|Dp427|Dp71	dystroglycan 1	protein-coding
unique_peak1-6513-12-10-0.189344366450341-0.386243247519795	chr7	118249829	118250510	+	0	NA	Intergenic	Intergenic	16020	NR_015573	75479	Mm.381620	NR_015573		1700012D14Rik	-	RIKEN cDNA 1700012D14 gene	ncRNA
common_peak2-31258-23-15-0.721767504509081-0.949797625454541	chr8	70776829	70777345	+	0	NA	Intergenic	ORR1D2|LTR|MaLR	-23340	NM_028182	72281	Mm.40974	NM_028182	ENSMUSG00000053886	Sh2d4a	2210402M20Rik|SH2A	SH2 domain containing 4A	protein-coding
common_peak2-25881-46-40-0.540443938630718-1.1755042381992	chr19	44248399	44249558	+	0	NA	intron (NM_181422, intron 2 of 14)	intron (NM_181422, intron 2 of 14)	17954	NM_181422	329064	Mm.308481	NM_181422	ENSMUSG00000037578	Pkd2l1	B830002B15|BC046386|PCL|PKD2L|Pkdl|TRPP3	polycystic kidney disease 2-like 1	protein-coding
common_peak1-13071-39-28-0.757780251791582-1.56058662248873	chr19	6296943	6298293	+	0	NA	exon (NM_010119, exon 4 of 5)	exon (NM_010119, exon 4 of 5)	-8839	NM_001033342	240505	Mm.329622	NM_001033342	ENSMUSG00000024769	Cdc42bpg	BC046418|MRCKgamma	CDC42 binding protein kinase gamma (DMPK-like)	protein-coding
common_peak2-27261-8-4-0.683294323060208-1.21878474469819	chr3	56631993	56632366	+	0	NA	Intergenic	Intergenic	473662	NM_008536	17112	Mm.856	NM_008536	ENSMUSG00000027800	Tm4sf1	L6|M3s1	transmembrane 4 superfamily member 1	protein-coding
common_peak1-17309-29-15-1.11229008061511-2.08778000015696	chr6	140368459	140369685	+	0	NA	Intergenic	Intergenic	-3548	NM_144920	109135	Mm.247670	NM_144920	ENSMUSG00000030231	Plekha5	2810431N21Rik|AI428202|AK129423|AMH-Cre|Ayu21-9|Gt(pU21)9Imeg|Pepp2|Tg(AMH-cre)1Flor	pleckstrin homology domain containing, family A member 5	protein-coding
unique_peak2-34308-6-10--0.894033508256995-1.21398586181642	chr13	91174772	91175385	+	0	NA	intron (NM_025770, intron 4 of 7)	intron (NM_025770, intron 4 of 7)	112351	NM_024175	66475	Mm.306302	NM_024175		Rps23	2410044J15Rik	ribosomal protein S23	protein-coding
unique_peak2-32640-5-6--0.511735258063458-0.947717972411649	chr1	128398441	128398754	+	0	NA	intron (NM_001081756, intron 3 of 16)	intron (NM_001081756, intron 3 of 16)	-9093	NM_172484	210356	Mm.377234	NM_172484	ENSMUSG00000049690	Nckap5	8430408F21|D130011D22Rik|E030049G20Rik|Erih1|Erih2|Gm1548|Nap5	NCK-associated protein 5	protein-coding
common_peak2-21623-16-10-0.658832023630764-0.699649909729472	chr11	101002319	101002844	+	0	NA	Intergenic	ID_B1|SINE|B4	-14617	NM_134028	103768	Mm.142348	NM_134028	ENSMUSG00000045007	Tubg2	AI504772|Tubgl	tubulin, gamma 2	protein-coding
unique_peak2-35332-6-14--1.34149248522822-1.01572999746118	chr17	23599342	23599910	+	0	NA	intron (NM_001104581, intron 5 of 5)	Lx3_Mus|LINE|L1	16938	NM_001104581	619788	Mm.469847	NM_001104581	ENSMUSG00000091407	Vmn2r117	EG619788|V2Rp6	vomeronasal 2, receptor 117	protein-coding
unique_peak1-4978-6-3-0.565398110380302-1.08602067057793	chr4	109113146	109113531	+	0	NA	intron (NM_153392, intron 14 of 17)	intron (NM_153392, intron 14 of 17)	25086	NM_001145948	230603	Mm.33091	NM_153392	ENSMUSG00000028555	Ttc39a	4922503N01Rik	tetratricopeptide repeat domain 39A	protein-coding
common_peak2-31729-13-8-0.608547029195456-0.660903317613904	chr9	13425167	13425755	+	0	NA	exon (NM_001013813, exon 1 of 4)	exon (NM_001013813, exon 1 of 4)	1028	NM_001013813	270118	Mm.116898	NM_173776	ENSMUSG00000031925	Maml2	5930431H10|BC032967	mastermind like 2 (Drosophila)	protein-coding
unique_peak1-2058-12-1-2.64877598508764-3.36932189928148	chr15	27538107	27538768	+	0	NA	exon (NM_001013792, exon 6 of 7)	exon (NM_001013792, exon 6 of 7)	22011	NM_001013792	432940	Mm.309164	NM_001013792	ENSMUSG00000046034	Otulin	C79097|Fam105b|m3Sapc|m7-1Sapc	OTU deubiquitinase with linear linkage specificity	protein-coding
unique_peak1-4566-8-4-0.683294323060208-1.21878474469819	chr3	52600944	52601433	+	0	NA	Intergenic	Intergenic	57542	NR_038079	329639	Mm.131245	NR_038079		Gm2447	100039832|A530017F20	predicted gene 2447	ncRNA
common_peak2-22468-38-102--1.11504786788469-4.61863740065277	chr13	46929379	46930557	+	0	NA	intron (NM_010617, intron 4 of 37)	intron (NM_010617, intron 4 of 37)	95119	NM_010617	16553	Mm.342703	NM_010617	ENSMUSG00000021375	Kif13a	4930505I07Rik|mKIAA4109	kinesin family member 13A	protein-coding
common_peak2-23089-33-53--0.423549939637939-0.696926118858569	chr14	76505220	76506001	+	0	NA	intron (NM_026177, intron 3 of 7)	intron (NM_026177, intron 3 of 7)	5012	NM_026177	67467	Mm.260767	NM_026177	ENSMUSG00000022008	Gpalpp1	1200011I18Rik|Kiaa1704	GPALPP motifs containing 1	protein-coding
unique_peak2-36005-5-6--0.511735258063458-0.947717972411649	chr19	38097199	38097702	+	0	NA	intron (NM_001099634, intron 2 of 52)	intron (NM_001099634, intron 2 of 52)	20617	NM_001099634	226101	Mm.34674	NM_177035	ENSMUSG00000048612	Myof	2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3	myoferlin	protein-coding
common_peak1-9773-32-42--0.147172735482438-0.325162986021101	chr12	55820412	55821523	+	0	NA	Intergenic	(GAAA)n|Simple_repeat|Simple_repeat	-24115	NM_025456	66266	Mm.156440	NM_025456	ENSMUSG00000054302	Eapp	1810011O16Rik	E2F-associated phosphoprotein	protein-coding
common_peak2-23220-14-19--0.422711934529718-0.403453972741636	chr15	3996003	3996804	+	0	NA	intron (NM_024188, intron 3 of 16)	L1_Mus4|LINE|L1	-18997	NR_028266	414066	Mm.394461	NR_028266		BC037032	-	cDNA Sequence BC037032	ncRNA
common_peak1-17342-116-147-0.284675967880471-1.02542258444921	chr6	149187713	149189420	+	0	NA	Intergenic	B1F|SINE|Alu	-51332	NM_001113424	232566	Mm.209147	NM_001113424	ENSMUSG00000068250	Amn1	5830467E07Rik|A230083D09|C730024G19Rik	antagonist of mitotic exit network 1	protein-coding
unique_peak1-6499-9-1-2.18961340640422-2.31132995230379	chr7	114317233	114317696	+	0	NA	intron (NM_001002894, intron 1 of 10)	Lx5|LINE|L1	6960	NM_001002894	76858	Mm.35644	NM_001002894	ENSMUSG00000016626	Nlrp14	4921520L01Rik|GC-LRR|Nalp-iota|Nalp14|Nalp14l	NLR family, pyrin domain containing 14	protein-coding
common_peak1-9314-12-12--0.0516637330534535-0.309718203022949	chr11	94345823	94346589	+	0	NA	intron (NM_144827, intron 2 of 15)	intron (NM_144827, intron 2 of 15)	418	NM_144827	217116	Mm.156123	NM_144827	ENSMUSG00000020867	Spata20	Tisp78	spermatogenesis associated 20	protein-coding
unique_peak2-36623-4-10--1.48289213249054-1.5150158574804	chr3	69893627	69894279	+	0	NA	Intergenic	Intergenic	82418	NM_001018031	229389	Mm.331071	NM_001018031	ENSMUSG00000027788	Otol1	Gm414	otolin 1 homolog (zebrafish)	protein-coding
unique_peak1-1190-8-3-1.00522241794757-1.39487600375387	chr11	102215680	102216201	+	0	NA	intron (NM_011403, intron 13 of 19)	(TCCA)n|Simple_repeat|Simple_repeat	10655	NM_011403	20533	Mm.7248	NM_011403	ENSMUSG00000006574	Slc4a1	Ae1|CD233|Empb3|l11Jus51	solute carrier family 4 (anion exchanger), member 1	protein-coding
common_peak2-26895-10-7-0.356415345008769-1.12966497611638	chr2	157567457	157567994	+	0	NA	intron (NM_025680, intron 1 of 15)	intron (NM_025680, intron 1 of 15)	4588	NM_025680	66642	Mm.45193	NM_025680	ENSMUSG00000027649	Ctnnbl1	5730471K09Rik|NAP|NYD-SP19|P14L	catenin, beta like 1	protein-coding
common_peak1-12991-77-36-1.57507321392705-8.83597781310453	chr19	4228960	4231090	+	0	NA	Intergenic	Intergenic	-1874	NM_027196	69745	Mm.32518	NM_027196	ENSMUSG00000024854	Pold4	2410012M21Rik|AI463381|AW060307|Polds|p12	polymerase (DNA-directed), delta 4	protein-coding
unique_peak1-6104-8-3-1.00522241794757-1.39487600375387	chr6	125473365	125473893	+	0	NA	Intergenic	Lx|LINE|L1	-28856	NM_007657	12527	Mm.210676	NM_007657	ENSMUSG00000030342	Cd9	Tspan29	CD9 antigen	protein-coding
unique_peak2-39990-2-5--1.50241675698448-1.08602067057793	chrX	160601905	160602343	+	0	NA	intron (NM_001130513, intron 8 of 18)	intron (NM_001130513, intron 8 of 18)	23712	NM_027286	70008	Mm.13451	NM_027286	ENSMUSG00000015405	Ace2	2010305L05Rik	angiotensin I converting enzyme (peptidyl-dipeptidase A) 2	protein-coding
unique_peak1-3906-10-2-1.77145284428761-2.09384600808989	chr2	24311763	24312283	+	0	NA	intron (NM_011040, intron 2 of 11)	intron (NM_011040, intron 2 of 11)	19096	NM_011040	18510	Mm.2533	NM_011040	ENSMUSG00000026976	Pax8	Pax-8	paired box 8	protein-coding
unique_peak1-2595-16-5-1.53330114154691-1.80287260729378	chr16	31884618	31885478	+	0	NA	exon (NM_013900, exon 5 of 16)	exon (NM_013900, exon 5 of 16)	6152	NM_013900	30060	Mm.30988	NM_013900	ENSMUSG00000022780	Mfi2	CD228|MTf	antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5	protein-coding
common_peak2-19525-27-23-0.40658345017408-0.622271369641148	chr1	53313143	53314131	+	0	NA	intron (NM_153556, intron 4 of 12)	intron (NM_153556, intron 4 of 12)	40203	NM_153556	227099	Mm.60499	NM_153556	ENSMUSG00000026098	Pms1	-	postmeiotic segregation increased 1 (S. cerevisiae)	protein-coding
unique_peak1-4039-10-6-0.549060422951165-1.21398586181642	chr2	58551977	58552530	+	0	NA	intron (NM_001289660, intron 1 of 7)	intron (NM_001289660, intron 1 of 7)	-55342	NM_001289659	76654	Mm.200370	NM_029692	ENSMUSG00000026839	Upp2	1700124F02Rik|AI266885|UDRPASE2|UP2|UPASE2	uridine phosphorylase 2	protein-coding
unique_peak1-7261-7-3-0.799090830298189-1.23214870625617	chr9	90047922	90048382	+	0	NA	Intergenic	ID_B1|SINE|B4	-9664	NM_001003911	108153	Mm.102141	NM_001003911	ENSMUSG00000032363	Adamts7	ADAM-TS7|ADAMTS7B	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 7	protein-coding
unique_peak1-2269-11-1-2.50869358425161-2.83420869758413	chr15	78059066	78059751	+	0	NA	Intergenic	Intergenic	-15833	NM_008677	17972	Mm.2068	NM_008677	ENSMUSG00000071715	Ncf4	AI451400|p40phox	neutrophil cytosolic factor 4	protein-coding
common_peak2-32084-49-32-0.96188970366673-2.66218884881337	chr9	96719401	96720268	+	0	NA	Intergenic	Intergenic	53853	NR_102296	319707	Mm.392191	NR_102293		C430002N11Rik	-	RIKEN cDNA C430002N11 gene	ncRNA
common_peak1-18140-28-18-0.805031606377877-1.27334590136207	chr8	10964389	10965567	+	0	NA	Intergenic	Intergenic	-36521	NR_030715	665306	Mm.358758	NR_030715	ENSMUSG00000038917	3930402G23Rik	-	RIKEN cDNA 3930402G23 gene	ncRNA
common_peak1-8175-30-58--0.712967639869968-1.42954500397924	chr10	18022224	18023186	+	0	NA	Intergenic	Intergenic	-67918	NM_144820	215814	Mm.296565	NM_144820	ENSMUSG00000059554	Ccdc28a	1700009P13Rik|AI480677	coiled-coil domain containing 28A	protein-coding
common_peak2-25658-43-33-0.695100344273364-1.50810240303318	chr19	10289804	10290871	+	0	NA	intron (NM_001033481, intron 17 of 25)	intron (NM_001033481, intron 17 of 25)	9814	NM_001163431	69038	Mm.375100	NM_026919	ENSMUSG00000036372	Tmem258	1810006K21Rik	transmembrane protein 258	protein-coding
common_peak1-19188-39-46-0.061172395241516-0.321605260051241	chr9	99567921	99569227	+	0	NA	3' UTR (NM_028258, exon 16 of 16)	3' UTR (NM_028258, exon 16 of 16)	38560	NM_028258	72507	Mm.221455	NM_028258	ENSMUSG00000037784	Dzip1l	2610524A10Rik|AI663976	DAZ interacting protein 1-like	protein-coding
common_peak2-30836-20-34--0.641208232353773-0.863762398024911	chr7	132575721	132576374	+	0	NA	Intergenic	ORR1B1-int|LTR|MaLR	-12087	NM_029842	77035	Mm.307239	NM_029842	ENSMUSG00000030752	Kdm8	3110005O21Rik|Jmjd5	lysine (K)-specific demethylase 8	protein-coding
unique_peak2-38274-5-5--0.289342836727009-0.909929411522249	chr6	129238170	129238586	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-12991	NM_001033122	12515	Mm.74745	NM_001033122	ENSMUSG00000030156	Cd69	5830438K24Rik|AI452015|AIM|VEA	CD69 antigen	protein-coding
common_peak2-27287-15-23--0.5727977501655-0.575340103425218	chr3	58372661	58373542	+	0	NA	Intergenic	RLTR1B|LTR|ERV1	-7479	NM_001040396	69227	Mm.270950	NM_001040396	ENSMUSG00000075700	Selt	2810407C02Rik|5730408P04Rik	selenoprotein T	protein-coding
unique_peak2-33103-7-23--1.78587167042297-2.25371873249797	chr10	80751365	80752196	+	0	NA	intron (NM_001282095, intron 1 of 20)	B1F|SINE|Alu	2232	NM_013769	27375	Mm.27984	NM_013769	ENSMUSG00000034917	Tjp3	-	tight junction protein 3	protein-coding
common_peak1-8950-47-52-0.206920970203349-0.456849196733765	chr11	54521673	54523474	+	0	NA	Intergenic	Intergenic	78632	NM_178626	72729	Mm.29476	NM_178626	ENSMUSG00000052298	Cdc42se2	2810404F18Rik|AA408783|AA536669|SPEC2	CDC42 small effector 2	protein-coding
common_peak2-25844-90-94-0.484449417611204-1.76325591554289	chr19	41829378	41830835	+	0	NA	Intergenic	ID_B1|SINE|B4	8655	NR_040320	100502871	Mm.394485	NR_040320		Gm19424	-	predicted gene, 19424	ncRNA
unique_peak2-37893-4-7--1.02346051385325-1.09384600808989	chr5	140514470	140514854	+	0	NA	intron (NM_010752, intron 17 of 17)	intron (NM_010752, intron 17 of 17)	130765	NM_175522	243312	Mm.237102	NM_175522	ENSMUSG00000048988	Elfn1	A930017N06Rik|AI197272|Ppp1r28	leucine rich repeat and fibronectin type III, extracellular 1	protein-coding
unique_peak1-2655-14-4-1.57728806547028-2.4322161449009	chr16	50752312	50753113	+	0	NA	Intergenic	Intergenic	-19826	NR_028300	68190	Mm.139089	NR_028300		5330426P16Rik	-	RIKEN cDNA 5330426P16 gene	ncRNA
common_peak2-25553-14-7-0.899216160357645-0.947446088118041	chr19	6264012	6264451	+	0	NA	promoter-TSS (NR_029720)	promoter-TSS (NR_029720)	-412	NR_029830	723957		NR_029830	miRBase:MI0000733	Mir194-2	Mirn194-2	microRNA 194-2	ncRNA
common_peak1-9924-20-10-1.0286431659539-1.30248952876293	chr12	101876721	101877504	+	0	NA	intron (NM_153587, intron 3 of 17)	Lx8|LINE|L1	86126	NM_153587	73086	Mm.220417	NM_153587	ENSMUSG00000021180	Rps6ka5	3110005L17Rik|6330404E13Rik|AI854034|MSK1|MSPK1|RLPK	ribosomal protein S6 kinase, polypeptide 5	protein-coding
common_peak1-13326-21-12-0.869049547125143-1.18646456559501	chr19	42752017	42752734	+	0	NA	Intergenic	Intergenic	-65079	NM_053083	67573	Mm.178767	NM_053083	ENSMUSG00000025185	Loxl4	4833426I20Rik|Loxc	lysyl oxidase-like 4	protein-coding
common_peak2-29330-27-24-0.347689761120511-0.550049347815233	chr5	147305647	147306821	+	0	NA	TTS (NM_001243110)	TTS (NM_001243110)	3295	NM_001243110	622924	Mm.389722	NM_001243110	ENSMUSG00000096527	Gm6370	-	predicted gene 6370	protein-coding
common_peak2-23326-50-38-0.755538097616704-1.95835867484699	chr15	37006328	37007353	+	0	NA	Intergenic	RLTR45-int|LTR|ERVK	-69683	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
common_peak2-23590-82-78-0.589482396128632-2.16756000320306	chr15	80159620	80161525	+	0	NA	intron (NM_001044308, intron 4 of 36)	intron (NM_001044308, intron 4 of 36)	42904	NM_001044308	239556	Mm.291058	NM_001044308	ENSMUSG00000022416	Cacna1i	Ca(V)3.3	calcium channel, voltage-dependent, alpha 1I subunit	protein-coding
unique_peak1-2041-14-5-1.31425365963649-1.4372489031793	chr15	25936120	25936830	+	0	NA	Intergenic	Intergenic	22354	NM_144523	52521	Mm.29145	NM_144523	ENSMUSG00000052253	Zfp622	1110033B05Rik|D15Ertd806e|ZPR9|Znf622	zinc finger protein 622	protein-coding
unique_peak1-2170-8-0-3.00522241794757-2.70926996097583	chr15	61461498	61462007	+	0	NA	Intergenic	RLTR26|LTR|ERVK	144254	NR_040350	432956	Mm.404918	NR_040350		D030024E09Rik	-	RIKEN cDNA D030024E09 gene	ncRNA
unique_peak2-35944-14-19--0.422711934529718-0.403453972741636	chr19	10172943	10173729	+	0	NA	intron (NM_019699, intron 1 of 11)	intron (NM_019699, intron 1 of 11)	2657	NM_019699	56473	Mm.38901	NM_019699	ENSMUSG00000024665	Fads2	2900042M13Rik|Fadsd2	fatty acid desaturase 2	protein-coding
common_peak1-7836-11-7-0.508693584251613-1.21681515183528	chr1	128400685	128401353	+	0	NA	intron (NM_001081756, intron 3 of 16)	intron (NM_001081756, intron 3 of 16)	-11515	NM_172484	210356	Mm.377234	NM_172484	ENSMUSG00000049690	Nckap5	8430408F21|D130011D22Rik|E030049G20Rik|Erih1|Erih2|Gm1548|Nap5	NCK-associated protein 5	protein-coding
common_peak1-17775-22-30--0.30691220529947-0.399869693390336	chr7	96951469	96952239	+	0	NA	intron (NM_181407, intron 5 of 13)	LTR16B1|LTR|ERVL	100285	NM_001162979	70884	Mm.252823	NM_001162979	ENSMUSG00000039391	Ccdc81	4921513D09Rik	coiled-coil domain containing 81	protein-coding
common_peak2-26931-12-8-0.478850983645327-0.562038191119709	chr2	163590595	163591030	+	0	NA	Intergenic	Intergenic	-14837	NM_001272052	11486	Mm.388	NM_007398	ENSMUSG00000017697	Ada	-	adenosine deaminase	protein-coding
common_peak2-22166-19-31--0.597312673338314-0.721233599456203	chr12	91590054	91590999	+	0	NA	Intergenic	Intergenic	386352	NM_010050	13371	Mm.21389	NM_010050	ENSMUSG00000007682	Dio2	5DII|AI324267|DIOII	deiodinase, iodothyronine, type II	protein-coding
common_peak2-28468-13-21--0.680959587999529-0.607095980551316	chr4	153957239	153957837	+	0	NA	intron (NM_027504, intron 1 of 16)	intron (NM_027504, intron 1 of 16)	52938	NR_045643	320939	Mm.436738	NR_045643		5930403L14Rik	-	RIKEN cDNA 5930403L14 gene	ncRNA
common_peak2-27006-30-67--0.917787431758466-2.35878721299898	chr2	172999988	173000716	+	0	NA	Intergenic	Intergenic	21778	NM_011044	18534	Mm.266867	NM_011044	ENSMUSG00000027513	Pck1	AI265463|PEPCK|Pck-1	phosphoenolpyruvate carboxykinase 1, cytosolic	protein-coding
common_peak1-10517-7-8--0.370834171144123-1.00793137938329	chr14	7934312	7934913	+	0	NA	intron (NM_001024712, intron 2 of 6)	intron (NM_001024712, intron 2 of 6)	3359	NM_001024712	100042149	Mm.396155	NM_001024712	ENSMUSG00000092167	Gm3696	544988|ENSMUSG00000056940|Gm10014	predicted gene 3696	protein-coding
common_peak1-11187-41-49-0.0572925150739358-0.320382596085891	chr15	76948329	76949665	+	0	NA	intron (NM_001110827, intron 3 of 13)	intron (NM_001110827, intron 3 of 13)	34169	NR_108037	74303	Mm.444304	NR_108037	ENSMUSG00000097267	1700109K24Rik	4933425G21Rik	RIKEN cDNA 1700109K24 gene	ncRNA
common_peak1-12267-9-14--0.717277189204299-0.53895475198017	chr17	42908886	42909395	+	0	NA	Intergenic	L1Md_F3|LINE|L1	-30012	NM_001033493	435529	Mm.136350	NM_001033493	ENSMUSG00000057899	Gpr111	PGR20	G protein-coupled receptor 111	protein-coding
common_peak1-17399-46-61--0.0562003671380733-0.302824621390623	chr7	4136596	4137739	+	0	NA	Intergenic	(T)n|Simple_repeat|Simple_repeat	-20866	NM_021454	58804	Mm.34268	NM_021454	ENSMUSG00000063838	Cdc42ep5	1700027J19Rik|2010007O02Rik|Borg3|C85526|CEP5	CDC42 effector protein (Rho GTPase binding) 5	protein-coding
common_peak2-20011-34-36-0.172615161372316-0.401350871931209	chr1	135283367	135284324	+	0	NA	intron (NM_011439, intron 7 of 13)	intron (NM_011439, intron 7 of 13)	23696	NM_175443	214253	Mm.52111	NM_175443	ENSMUSG00000070644	Etnk2	4933417N20Rik|AI197444|EKI 2|Eki2|Tuc1	ethanolamine kinase 2	protein-coding
unique_peak1-6807-10-6-0.549060422951165-1.21398586181642	chr8	71627543	71628015	+	0	NA	intron (NM_007509, intron 9 of 13)	intron (NM_007509, intron 9 of 13)	-14658	NM_153054	110877	Mm.19301	NM_153054	ENSMUSG00000036330	Slc18a1	4832416I10Rik|Vat1|Vmat1	solute carrier family 18 (vesicular monoamine), member 1	protein-coding
common_peak2-31093-15-27--0.795190171501948-0.918917574080418	chr8	25976185	25976807	+	0	NA	intron (NM_153397, intron 17 of 21)	intron (NM_153397, intron 17 of 21)	-41655	NM_001272059	11499	Mm.143889	NM_007401	ENSMUSG00000031554	Adam5	tMDC II|tMDCII	a disintegrin and metallopeptidase domain 5	protein-coding
common_peak2-30392-13-25--0.921967687503323-0.983972868822056	chr7	30649543	30650278	+	0	NA	intron (NM_172740, intron 2 of 3)	(CCCTG)n|Simple_repeat|Simple_repeat	4912	NM_172740	233058	Mm.297657	NM_172740	ENSMUSG00000058402	Zfp420	B230119D13|B230312I18Rik|mszf59-1|mszf70	zinc finger protein 420	protein-coding
common_peak1-18318-25-21-0.402418286707809-0.580176690544129	chr8	53511629	53512287	+	0	NA	Intergenic	Intergenic	-1085098	NM_001205054	11593	Mm.334535	NM_001005847	ENSMUSG00000031521	Aga	AW060726	aspartylglucosaminidase	protein-coding
common_peak1-12071-9-29--1.7172771892043-2.70611768348013	chr17	24141057	24141562	+	0	NA	Intergenic	Intergenic	-6242	NM_133731	70835	Mm.157351	NM_133731	ENSMUSG00000045027	Prss22	4733401N09Rik|BSSP-4|SP001LA	protease, serine 22	protein-coding
common_peak2-21829-9-9--0.132314688483142-1.03275496310833	chr11	120346941	120347361	+	0	NA	intron (NM_027204, intron 3 of 4)	intron (NM_027204, intron 3 of 4)	1168	NM_027204	56282	Mm.133851	NM_027204		Mrpl12	0610034O11Rik|1500031N16Rik|MRP-L12|Rpml12	mitochondrial ribosomal protein L12	protein-coding
unique_peak2-33275-6-12--1.13504160776079-1.45089835786865	chr10	128923118	128923575	+	0	NA	Intergenic	Intergenic	13596	NM_146551	258544	Mm.377560	NM_146551	ENSMUSG00000049217	Olfr788	MOR111-4	olfactory receptor 788	protein-coding
unique_peak1-4572-10-2-1.77145284428761-2.09384600808989	chr3	54756673	54757230	+	0	NA	Intergenic	B4A|SINE|B4	-37142	NM_177854	329641	Mm.51187	NM_177854	ENSMUSG00000056306	Sertm1	6030405A18Rik	serine rich and transmembrane domain containing 1	protein-coding
common_peak1-10781-9-14--0.717277189204299-0.53895475198017	chr14	73552771	73553356	+	0	NA	intron (NM_134083, intron 2 of 14)	intron (NM_134083, intron 2 of 14)	10471	NR_033185	105670	Mm.280068	NM_134083	ENSMUSG00000022106	Rcbtb2	2610028E02Rik|2810420M18Rik|AI448345|AW240694|Chc1l|RC/BTB2	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2	protein-coding
unique_peak2-39693-16-21--0.341167976369236-0.392630012299441	chr9	110696975	110698095	+	0	NA	Intergenic	Intergenic	-3154	NM_153099	235628	Mm.292285	NM_153099	ENSMUSG00000044664	Prss42	Tessp2	protease, serine 42	protein-coding
common_peak2-22524-9-10--0.269818212233077-1.05503135781948	chr13	55105378	55105881	+	0	NA	intron (NM_153131, intron 14 of 15)	L2c|LINE|L2	16551	NM_001206390	212032	Mm.267479	NM_001033245	ENSMUSG00000025877	Hk3	HK III|HK-III	hexokinase 3	protein-coding
common_peak2-23019-10-5-0.771452844287613-1.33892459842472	chr14	63543462	63543865	+	0	NA	intron (NM_175546, intron 3 of 11)	intron (NM_175546, intron 3 of 11)	59284	NR_105860	102465311		NR_105860		Mir6541	mmu-mir-6541	microRNA mir-6541	ncRNA
common_peak2-23355-14-26--0.855671341805824-0.949797625454538	chr15	43477233	43477788	+	0	NA	Intergenic	RSINE1|SINE|B4	168735	NM_025736	66736	Mm.244512	NM_025736	ENSMUSG00000022337	Emc2	4921531G14Rik|AV060620|AW209495|Ttc35	ER membrane protein complex subunit 2	protein-coding
common_peak2-30412-31-48--0.389471173302085-0.611014125894502	chr7	38018623	38019642	+	0	NA	Intergenic	Intergenic	535639	NM_172385	243937	Mm.322505	NM_172385	ENSMUSG00000043456	Zfp536	9630010P11Rik|Znf536|mKIAA0390	zinc finger protein 536	protein-coding
common_peak2-31310-20-12-0.787635066450101-0.949240599462708	chr8	78742566	78743181	+	0	NA	Intergenic	Intergenic	681199	NR_028579	100039211	Mm.367571	NR_028579	ENSMUSG00000074235	Gm10649	ENSMUSG00000074235	predicted gene 10649	ncRNA
unique_peak1-773-13-2-2.19350952991661-3.03832868024006	chr10	128778752	128779443	+	0	NA	Intergenic	L1_Mus2|LINE|L1	-8524	NM_001011797	257985	Mm.422962	NM_001011797	ENSMUSG00000095075	Olfr782	MOR110-8	olfactory receptor 782	protein-coding
unique_peak1-3687-10-0-3.35641534500877-3.31132995230379	chr19	42727498	42728038	+	0	NA	Intergenic	Intergenic	-40472	NM_053083	67573	Mm.178767	NM_053083	ENSMUSG00000025185	Loxl4	4833426I20Rik|Loxc	lysyl oxidase-like 4	protein-coding
unique_peak2-35751-5-6--0.511735258063458-0.947717972411649	chr18	38625734	38626203	+	0	NA	Intergenic	Intergenic	47339	NM_022996	65113	Mm.102496	NM_022996	ENSMUSG00000024425	Ndfip1	0610010M22Rik|N4wbp5	Nedd4 family interacting protein 1	protein-coding
unique_peak1-7298-12-3-1.64877598508764-2.36932189928148	chr9	110661473	110662085	+	0	NA	Intergenic	Intergenic	-4406	NM_010859	17897	Mm.7353	NM_010859	ENSMUSG00000059741	Myl3	MLC1s|MLC1v|Mylc|VLC1	myosin, light polypeptide 3	protein-coding
common_peak2-25059-32-48--0.335617824895548-0.503563708672202	chr18	34330496	34331646	+	0	NA	Intergenic	(TTTA)n|Simple_repeat|Simple_repeat	-49567	NM_007462	11789	Mm.384171	NM_007462	ENSMUSG00000005871	Apc	AI047805|AU020952|AW124434|CC1|Min|mAPC	adenomatosis polyposis coli	protein-coding
common_peak1-13959-37-39-0.204064976598456-0.426350872773373	chr2	91729834	91730802	+	0	NA	intron (NM_172669, intron 14 of 17)	PB1D10|SINE|Alu	-32028	NM_007699	12672	Mm.330405	NM_007699	ENSMUSG00000040495	Chrm4	Chrm-4|M4	cholinergic receptor, muscarinic 4	protein-coding
common_peak1-14510-13-23--0.806490470083387-0.781208772652439	chr3	20057655	20058197	+	0	NA	Intergenic	Intergenic	-2911	NM_013755	27357	Mm.6375	NM_013755	ENSMUSG00000019528	Gyg	AU017667|Gyg1	glycogenin	protein-coding
unique_peak1-2506-11-1-2.50869358425161-2.83420869758413	chr16	13882952	13883462	+	0	NA	intron (NM_001291017, intron 3 of 23)	intron (NM_001291017, intron 3 of 23)	20031	NM_001039533	94184	Mm.171484	NM_053181	ENSMUSG00000022680	Pdxdc1	2210010A19Rik|AA415817|Kiaa0251-hp	pyridoxal-dependent decarboxylase domain containing 1	protein-coding
unique_peak2-33028-7-21--1.66034078833911-1.89173646618541	chr10	69507080	69507830	+	0	NA	Intergenic	ORR1C2|LTR|MaLR	-52414	NM_001111121	76551	Mm.281741	NM_001111121	ENSMUSG00000048701	Ccdc6	2810012H18Rik|AA536681|AA960498|AW061011	coiled-coil domain containing 6	protein-coding
common_peak2-20231-21-16-0.482026424015896-0.650819692678078	chr1	181232229	181232972	+	0	NA	intron (NM_027188, intron 5 of 11)	intron (NM_027188, intron 5 of 11)	215534	NM_027188	69726	Mm.222338	NM_027188		Smyd3	2410008A19Rik|Zmynd1	SET and MYND domain containing 3	protein-coding
common_peak2-26139-11-13--0.298661337805991-0.337263207250336	chr2	13405657	13406215	+	0	NA	intron (NM_001081084, intron 6 of 66)	intron (NM_001081084, intron 6 of 66)	7567	NM_001081084	65969	Mm.313915	NM_001081084	ENSMUSG00000026726	Cubn	AA408369|AL022750|D2Wsu88e	cubilin (intrinsic factor-cobalamin receptor)	protein-coding
common_peak1-16773-25-23-0.27688740462395-0.451698068655807	chr6	37617873	37618832	+	0	NA	Intergenic	RCHARR1|DNA|MER1_type	138179	NM_145364	208665	Mm.262635	NM_145364	ENSMUSG00000038641	Akr1d1	-	aldo-keto reductase family 1, member D1	protein-coding
common_peak1-8962-52-50-0.435834648294204-0.962598551638154	chr11	57644863	57646001	+	0	NA	5' UTR (NM_008213, exon 1 of 2)	5' UTR (NM_008213, exon 1 of 2)	217	NM_008213	15110	Mm.4746	NM_008213	ENSMUSG00000037335	Hand1	Ehand1|Hxt|Th1|Thing1|bHLHa27|eHAND	heart and neural crest derivatives expressed transcript 1	protein-coding
common_peak1-13816-44-60--0.108844502994351-0.317735460399505	chr2	52072613	52073772	+	0	NA	intron (NM_010889, intron 85 of 156)	intron (NM_010889, intron 85 of 156)	-73330	NR_040620	78049	Mm.243883	NR_040620		4930573O16Rik	-	RIKEN cDNA 4930573O16 gene	ncRNA
common_peak2-29227-8-7-0.00522241794757061-1.00793137938329	chr5	138161119	138161561	+	0	NA	Intergenic	Intergenic	19886	NM_175521	243300	Mm.74750	NM_175521	ENSMUSG00000045348	Nyap1	6430598A04Rik	neuronal tyrosine-phosphorylated phosphoinositide 3-kinase adaptor 1	protein-coding
common_peak2-19833-16-7-1.11826364226806-1.23399803405144	chr1	90289529	90289850	+	0	NA	Intergenic	RMER1B|Other|Other	-13905	NM_029269	75396	Mm.173058	NM_029269	ENSMUSG00000026295	Spp2	0610038O04Rik|pp-24|spp24	secreted phosphoprotein 2	protein-coding
common_peak2-24224-23-18-0.473839991065495-0.618644178587689	chr16	85133590	85134419	+	0	NA	intron (NM_001198823, intron 1 of 17)	intron (NM_001198823, intron 1 of 17)	39948	NM_001198825	11820	Mm.277585	NM_007471	ENSMUSG00000022892	App	Abeta|Abpp|Adap|Ag|Cvap|E030013M08Rik|betaApp	amyloid beta (A4) precursor protein	protein-coding
common_peak2-21081-83-163--0.443329379511957-1.65474951701149	chr11	50291122	50292944	+	0	NA	Intergenic	B4A|SINE|B4	-47420	NM_172557	216724	Mm.390400	NM_172557	ENSMUSG00000020375	Rufy1	3000002E04Rik|Rabip4|ZFYVE12	RUN and FYVE domain containing 1	protein-coding
common_peak2-27903-20-22--0.03548717146582-0.301029995663994	chr4	3574524	3575197	+	0	NA	Intergenic	Intergenic	-8793	NR_040643	70143	Mm.417835	NR_040643	ENSMUSG00000085394	2210414B05Rik	-	RIKEN cDNA 2210414B05 gene	ncRNA
common_peak1-18131-15-16--0.075298090694683-0.301029995663976	chr8	10589663	10590305	+	0	NA	intron (NM_001081397, intron 33 of 35)	intron (NM_001081397, intron 33 of 35)	292470	NR_040705	320014	Mm.403203	NR_040705		B930025P03Rik	-	RIKEN cDNA B930025P03 gene	ncRNA
unique_peak1-2008-16-9-0.796335547380699-0.844317084070804	chr15	5184431	5185218	+	0	NA	exon (NM_001136079, exon 3 of 3)	exon (NM_001136079, exon 3 of 3)	9363	NM_001136079	19219	Mm.18509	NM_008965	ENSMUSG00000039942	Ptger4	EP4|Ptgerep4	prostaglandin E receptor 4 (subtype EP4)	protein-coding
common_peak1-13847-53-88--0.334760418550469-0.696474447554397	chr2	60880614	60882060	+	0	NA	Intergenic	Intergenic	-68129	NR_045335	100038493	Mm.388076	NR_045335	ENSMUSG00000075325	Gm13582	ENSMUSG00000075325|OTTMUSG00000012844	predicted gene 13582	ncRNA
common_peak1-18782-50-31-1.04094031647895-3.10619360587017	chr8	128653719	128655394	+	0	NA	Intergenic	Intergenic	135554	NM_008430	16525	Mm.10800	NM_008430	ENSMUSG00000033998	Kcnk1	AI788889|TWIK-1	potassium channel, subfamily K, member 1	protein-coding
unique_peak2-38439-12-27--1.15857893696997-1.38791538138627	chr7	27356691	27357631	+	0	NA	intron (NM_001048220, intron 8 of 8)	intron (NM_001048220, intron 8 of 8)	37077	NM_001048219	233001	Mm.11889	NM_194056	ENSMUSG00000054102	Nlrp9a	D7Ertd565e|Nalp-theta|Nalp9a	NLR family, pyrin domain containing 9A	protein-coding
common_peak2-20770-19-13-0.595332404604082-0.713635438203849	chr10	116996052	116996655	+	0	NA	Intergenic	Intergenic	-70203	NM_027468	70574	Mm.339332	NM_027468	ENSMUSG00000020183	Cpm	1110060I01Rik|5730456K23Rik|AA589379|E030045M14Rik	carboxypeptidase M	protein-coding
unique_peak1-3074-9-2-1.60465090568306-1.87199725847353	chr18	20457487	20458004	+	0	NA	Intergenic	Lx|LINE|L1	-11629	NM_010079	13510	Mm.37953	NM_010079	ENSMUSG00000069441	Dsg1a	BB010119|Dsg1	desmoglein 1 alpha	protein-coding
common_peak2-22013-12-38--1.63662623377461-3.08052104495994	chr12	56696010	56697074	+	0	NA	Intergenic	(GCTG)n|Simple_repeat|Simple_repeat	-3362	NM_020287	56856	Mm.114886	NM_020287	ENSMUSG00000045440	Insm2	Mlt1	insulinoma-associated 2	protein-coding
unique_peak1-847-16-3-2.11826364226806-2.65002542325363	chr11	18571872	18572659	+	0	NA	Intergenic	MLT1I|LTR|MaLR	346707	NM_001193271	17268	Mm.356578	NM_010789	ENSMUSG00000020160	Meis1	C530044H18Rik|Evi8	Meis homeobox 1	protein-coding
unique_peak2-33976-5-11--1.28934283672701-1.477227296591	chr12	84773212	84773796	+	0	NA	intron (NM_001267625, intron 1 of 10)	RLTR11A|LTR|ERVK	55182	NM_001267626	70127	Mm.151308	NM_058212	ENSMUSG00000021221	Dpf3	2810403B03Rik|6530402L11Rik|BAF45C|C78788|CERD4|cer-d4	D4, zinc and double PHD fingers, family 3	protein-coding
common_peak2-20930-75-115--0.118914003384287-0.363644558008837	chr11	6625689	6627128	+	0	NA	Intergenic	MTD|LTR|MaLR	-6368	NR_046025	626419	Mm.390334	NR_046025	ENSMUSG00000086808	Gm11981	OTTMUSG00000005129	predicted gene 11981	ncRNA
common_peak2-32070-50-72--0.148884242401065-0.357694962737398	chr9	95511189	95512904	+	0	NA	Intergenic	MTD|LTR|MaLR	-26001	NM_029620	76477	Mm.46016	NM_029620		Pcolce2	2400001O18Rik|Pcpe2	procollagen C-endopeptidase enhancer 2	protein-coding
common_peak1-15463-34-46--0.172520324676372-0.340524918943711	chr4	103119332	103120282	+	0	NA	intron (NR_040673, intron 3 of 3)	intron (NR_040673, intron 3 of 3)	64702	NR_040673	622167	Mm.244115	NR_040673	ENSMUSG00000086136	Gm12718	OTTMUSG00000008109	predicted gene 12718	ncRNA
common_peak1-13050-57-49-0.622176850304204-1.66351452419095	chr19	5840100	5842097	+	0	NA	Intergenic	Intergenic	4380	NR_003513	66961	Mm.281895	NR_003513		Neat1	2310043N10Rik|VINC	nuclear paraspeckle assembly transcript 1 (non-protein coding)	ncRNA
common_peak2-30096-12-8-0.478850983645327-0.562038191119709	chr6	135038842	135039372	+	0	NA	Intergenic	B4A|SINE|B4	23427	NM_181444	232431	Mm.23575	NM_181444	ENSMUSG00000046733	Gprc5a	Rai3|Raig1	G protein-coupled receptor, family C, group 5, member A	protein-coding
unique_peak2-33416-1-6--2.43441193227435-1.56314192529759	chr11	59458709	59459035	+	0	NA	Intergenic	Intergenic	-17125	NM_201245	26936	Mm.2402	NM_012027	ENSMUSG00000005417	Mprip	9530046C02|AA536749|AI647711|C76423|RIP3|Rhoip3|mKIAA0864|p116Rip	myosin phosphatase Rho interacting protein	protein-coding
unique_peak1-6333-8-0-3.00522241794757-2.70926996097583	chr7	47071760	47072201	+	0	NA	Intergenic	L1_Mur2|LINE|L1	298844	NM_001004139	70227	Mm.333800	NM_001004139	ENSMUSG00000068959	Zfp619	3000002G13Rik	zinc finger protein 619	protein-coding
common_peak1-9262-28-15-1.05295911982146-1.80321929531239	chr11	87026181	87027398	+	0	NA	intron (NM_197987, intron 22 of 23)	B1_Mm|SINE|Alu	86212	NM_197987	68729	Mm.17436	NM_197987	ENSMUSG00000018548	Trim37	1110032A10Rik|2810004E07Rik|AI848587|AU043018|MUL|TEF3|mKIAA0898	tripartite motif-containing 37	protein-coding
common_peak2-20254-19-17-0.232762325219374-0.392630012299441	chr1	184882380	184883115	+	0	NA	Intergenic	B3A|SINE|B2	-2172	NM_016928	53791	Mm.116894	NM_016928	ENSMUSG00000079164	Tlr5	-	toll-like receptor 5	protein-coding
common_peak2-26247-15-6-1.20480982849805-1.32521814697968	chr2	29820412	29820847	+	0	NA	promoter-TSS (NM_001177667)	promoter-TSS (NM_001177667)	-451	NM_001177668	20740	Mm.204969	NM_001076554	ENSMUSG00000057738	Sptan1	2610027H02Rik|Spna-2|Spna2	spectrin alpha, non-erythrocytic 1	protein-coding
unique_peak1-3669-35-11-1.84640775774135-4.70184985774135	chr19	41269269	41270751	+	0	NA	intron (NM_011904, intron 1 of 20)	4.5SRNA|scRNA|scRNA	11254	NM_011904	24087	Mm.89983	NM_011904	ENSMUSG00000025013	Tll2	-	tolloid-like 2	protein-coding
unique_peak2-39532-1-6--2.43441193227435-1.56314192529759	chr9	66796077	66796523	+	0	NA	intron (NM_026467, intron 3 of 3)	AT_rich|Low_complexity|Low_complexity	2375	NM_026467	67941	Mm.30120	NM_026467	ENSMUSG00000036781	Rps27l	1810034D23Rik	ribosomal protein S27-like	protein-coding
common_peak1-8254-7-8--0.370834171144123-1.00793137938329	chr10	19957407	19957919	+	0	NA	intron (NM_008635, intron 3 of 17)	intron (NM_008635, intron 3 of 17)	29418	NM_001101561	621697	Mm.440587	NM_001101561		Gm6251	EG621697	predicted gene 6251	protein-coding
common_peak1-14122-11-14--0.398197011356905-0.379391706698377	chr2	129065833	129066429	+	0	NA	Intergenic	Intergenic	21426	NR_045838	329513	Mm.473529	NM_177847	ENSMUSG00000056738	A730036I17Rik	-	RIKEN cDNA A730036I17 gene	ncRNA
unique_peak1-5826-8-4-0.683294323060208-1.21878474469819	chr6	72239533	72240062	+	0	NA	Intergenic	Intergenic	-14807	NM_001282071	20388	Mm.46033	NM_147779	ENSMUSG00000056370	Sftpb	AI562151|SF-B|SP-B|Sftp-3|Sftp3	surfactant associated protein B	protein-coding
unique_peak1-2306-20-5-1.90311228387004-2.81016724606745	chr15	81138775	81139853	+	0	NA	Intergenic	ID_B1|SINE|B4	51881	NM_011399	20524	Mm.222536	NM_011399	ENSMUSG00000022404	Slc25a17	34kDa|47kDa|PMP34|Pmp47	solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17	protein-coding
common_peak1-13859-26-54--0.853460621366198-1.81099027427052	chr2	66123740	66125184	+	0	NA	intron (NM_018733, intron 23 of 26)	PB1D10|SINE|Alu	-29788	NM_001290669	73668	Mm.250868	NM_001047604	ENSMUSG00000034848	Ttc21b	2410066K11Rik|Thm1|aln|mKIAA1992	tetratricopeptide repeat domain 21B	protein-coding
common_peak1-15828-65-101--0.180259402494368-0.438670624754528	chr5	124353696	124355043	+	0	NA	Intergenic	Intergenic	-2915	NM_026603	68184	Mm.28549	NM_026603	ENSMUSG00000023106	Denr	1500003K04Rik	density-regulated protein	protein-coding
common_peak2-29506-39-34-0.486478229974187-0.89292906939411	chr6	34349656	34350684	+	0	NA	Intergenic	Intergenic	-12192	NM_009731	11997	Mm.482073	NM_009731	ENSMUSG00000052131	Akr1b7	AR|Avdp|MVDP	aldo-keto reductase family 1, member B7	protein-coding
common_peak1-16213-28-35--0.11696588162085-0.313805205020546	chr5	96802451	96803634	+	0	NA	promoter-TSS (NM_175473)	promoter-TSS (NM_175473)	68	NM_175473	231470	Mm.291120	NM_175473	ENSMUSG00000034687	Fras1	E130113P14Rik|bl|mKIAA1500	Fraser syndrome 1 homolog (human)	protein-coding
common_peak1-19197-143-203-0.185092757005942-0.721159525299441	chr9	100641499	100644924	+	0	NA	intron (NM_009282, intron 4 of 33)	intron (NM_009282, intron 4 of 33)	99169	NM_009282	20842	Mm.42135	NM_009282	ENSMUSG00000037286	Stag1	AU045003|SA-1|Scc3	stromal antigen 1	protein-coding
unique_peak1-2940-8-0-3.00522241794757-2.70926996097583	chr17	62058078	62058533	+	0	NA	Intergenic	Intergenic	1172361	NM_207654	13640	Mm.7978	NM_010109		Efna5	AL-1|AV158822|EFL-5|Ephrin-A5|Epl7|LERK-7|RAGS	ephrin A5	protein-coding
common_peak2-26053-69-61-0.640946136871857-2.0979277312568	chr2	30441307	30442785	+	0	NA	Intergenic	Intergenic	-8518	NM_030137	78617	Mm.40413	NM_030137	ENSMUSG00000047363	Cstad	9530039B02Rik	CSA-conditional, T cell activation-dependent protein	protein-coding
common_peak2-26711-21-43--0.889942353371062-1.48724131519613	chr2	128818090	128818876	+	0	NA	intron (NM_178404, intron 2 of 11)	intron (NM_178404, intron 2 of 11)	25345	NM_178404	78751	Mm.26377	NM_178404	ENSMUSG00000042851	Zc3h6	4631426G04Rik|4833425H18Rik|AU024389|AW060453|Zc3hdc6|mKIAA2035	zinc finger CCCH type containing 6	protein-coding
common_peak2-26727-37-41-0.133675648707058-0.363463023472118	chr2	131209693	131210717	+	0	NA	Intergenic	LTRIS_Mus|LTR|ERV1	-31577	NM_178607	51902	Mm.477523	NM_178607	ENSMUSG00000048911	Rnf24	2810473M14Rik|4930505A13Rik|AI317164|C86507|D2Ertd504e	ring finger protein 24	protein-coding
unique_peak2-36503-4-8--1.19338551529556-1.21878474469819	chr2	156862443	156862831	+	0	NA	intron (NM_001164663, intron 6 of 14)	B1F|SINE|Alu	-29826	NM_025853	66934	Mm.25410	NM_025853	ENSMUSG00000027635	Dsn1	1700022L09Rik|AW552447	DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)	protein-coding
common_peak1-10468-67-118--0.350406280524949-0.945752090589672	chr13	111488403	111490054	+	0	NA	Intergenic	Lx8|LINE|L1	303976	NM_152804	20620	Mm.380	NM_152804	ENSMUSG00000021701	Plk2	Snk	polo-like kinase 2	protein-coding
unique_peak2-36904-12-21--0.810655633549659-0.713635438203849	chr3	96558096	96559144	+	0	NA	intron (NM_026406, intron 2 of 8)	intron (NM_026406, intron 2 of 8)	27086	NM_026406	67845	Mm.386792	NM_026406	ENSMUSG00000028098	Rnf115	2610028E05Rik|AU042696|Zfp364	ring finger protein 115	protein-coding
common_peak1-18772-22-17-0.477359103645092-0.633951497070961	chr8	126849698	126850620	+	0	NA	intron (NM_139272, intron 6 of 15)	B3|SINE|B2	94865	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
unique_peak2-39259-7-12--0.901348887842903-1.31827279259406	chr8	119428674	119429321	+	0	NA	intron (NM_026844, intron 2 of 3)	intron (NM_026844, intron 2 of 3)	16339	NM_026844	66531	Mm.4011	NM_026844	ENSMUSG00000014633	Cmc2	1110046L09Rik|2310061C15Rik|DC13	COX assembly mitochondrial protein 2	protein-coding
unique_peak2-34591-2-6--1.72480917832092-1.26211192963361	chr14	70021422	70021814	+	0	NA	intron (NM_033325, intron 1 of 13)	intron (NM_033325, intron 1 of 13)	12335	NM_033325	94352	Mm.116714	NM_033325	ENSMUSG00000034205	Loxl2	1110004B06Rik|4930526G11Rik|9430067E15Rik	lysyl oxidase-like 2	protein-coding
common_peak1-13790-46-54-0.116636229724142-0.36963450245888	chr2	38643214	38644160	+	0	NA	intron (NM_010264, intron 3 of 10)	intron (NM_010264, intron 3 of 10)	-3652	NM_001159549	14536	Mm.439703	NM_010264	ENSMUSG00000063972	Nr6a1	1700113M01Rik|Gcnf|NCNF|RTR	nuclear receptor subfamily 6, group A, member 1	protein-coding
common_peak1-14112-65-43-1.03273432083983-3.9867206098125	chr2	127586939	127588044	+	0	NA	intron (NM_001291012, intron 11 of 19)	intron (NM_001291012, intron 11 of 19)	27136	NM_016902	53885	Mm.210766	NM_016902	ENSMUSG00000027378	Nphp1	-	nephronophthisis 1 (juvenile) homolog (human)	protein-coding
common_peak2-28208-48-61-0.0167308408479396-0.308035049112922	chr4	117288942	117289955	+	0	NA	intron (NM_001285901, intron 6 of 7)	intron (NM_001285901, intron 6 of 7)	65382	NM_023178	66233	Mm.29142	NM_023178	ENSMUSG00000009640	Dmap1	1500016M21Rik|DNMAP1|DNMTAP1|Dmtap1|mKIAA1425	DNA methyltransferase 1-associated protein 1	protein-coding
common_peak2-30554-20-69--1.64120823235377-5.83587913882593	chr7	75455544	75456530	+	0	NA	intron (NM_001013811, intron 3 of 8)	intron (NM_001013811, intron 3 of 8)	-34557	NR_040340	100504026	Mm.426764	NR_040340	ENSMUSG00000086628	Gm16157	OTTMUSG00000031023	predicted gene 16157	ncRNA
common_peak2-28869-14-23--0.685746340363512-0.669502273696327	chr5	76346225	76347226	+	0	NA	intron (NM_010612, intron 18 of 29)	RSINE1|SINE|B4	27728	NM_010612	16542	Mm.285	NM_010612	ENSMUSG00000062960	Kdr	6130401C07|Flk-1|Flk1|Krd-1|Ly73|VEGFR-2|VEGFR2|sVEGFR-2	kinase insert domain protein receptor	protein-coding
unique_peak1-1353-10-3-1.35641534500877-1.75805390616669	chr12	20196822	20197271	+	0	NA	Intergenic	B3|SINE|B2	624594	NR_015521	69513	Mm.273972	NR_015521		1700030C10Rik	-	RIKEN cDNA 1700030C10 gene	ncRNA
unique_peak1-266-17-1-3.21829633820504-4.59734841376773	chr1	92815490	92816021	+	0	NA	intron (NM_053015, intron 1 of 15)	PB1D9|SINE|Alu	4078	NM_053015	171531	Mm.105208	NM_053015	ENSMUSG00000026303	Mlph	2210418F23Rik|5031433I09Rik|AW228792|D1Wsu84e|Slac-2a|l(1)-3Rk|l1Rk3|ln	melanophilin	protein-coding
unique_peak2-35578-5-15--1.70438033600585-1.4372489031793	chr17	71256793	71257555	+	0	NA	Intergenic	Intergenic	-54302	NM_001164074	21815	Mm.101034	NM_009372	ENSMUSG00000047407	Tgif1	AA959811|AI462167|Tgif	TGFB-induced factor homeobox 1	protein-coding
common_peak1-19282-21-17-0.399564263823923-0.561823156887258	chr9	119323044	119323740	+	0	NA	intron (NM_007397, intron 1 of 9)	intron (NM_007397, intron 1 of 9)	11773	NM_007397	11481	Mm.390239	NM_007397	ENSMUSG00000061393	Acvr2b	ActRIIB	activin receptor IIB	protein-coding
common_peak2-28225-27-28-0.133564955767664-0.358978896303361	chr4	119124950	119125722	+	0	NA	intron (NM_001014900, intron 7 of 7)	intron (NM_001014900, intron 7 of 7)	30047	NM_001014900	332934	Mm.388911	NM_001014900	ENSMUSG00000070806	Zmynd12	AI414736	zinc finger, MYND domain containing 12	protein-coding
common_peak2-30858-44-51-0.121453116427443-0.373449689110125	chr7	139247697	139249290	+	0	NA	intron (NM_018867, intron 10 of 13)	intron (NM_018867, intron 10 of 13)	90350	NM_173410	233919	Mm.208740	NM_173410		Gpr26	9630036A11Rik|A730021D22	G protein-coupled receptor 26	protein-coding
unique_peak2-38401-6-13--1.2419568116773-1.58711810488664	chr7	19672317	19672979	+	0	NA	TTS (NR_037282)	TTS (NR_037282)	471	NR_037282	100526504		NR_037282		Mir3100	mmu-mir-3100	microRNA 3100	ncRNA
unique_peak1-7430-20-7-1.48807478459119-2.07034318903805	chrX	167049938	167050855	+	0	NA	Intergenic	Intergenic	-633547	NR_029457	654820	Mm.34441	NM_001039559	ENSMUSG00000072844	G530011O06Rik	-	RIKEN cDNA G530011O06 gene	ncRNA
common_peak2-27403-24-35--0.376715098674596-0.470271536760928	chr3	88336298	88337261	+	0	NA	intron (NM_001029890, intron 1 of 1)	CpG	462	NM_001029890	72640	Mm.275154	NM_001029890	ENSMUSG00000074480	Mex3a	2700083E18Rik|Gm411|Rkhd4	mex3 homolog A (C. elegans)	protein-coding
common_peak1-16153-10-12--0.344024373132323-0.340565874754526	chr5	76346443	76346806	+	0	NA	intron (NM_010612, intron 18 of 29)	intron (NM_010612, intron 18 of 29)	27829	NM_010612	16542	Mm.285	NM_010612	ENSMUSG00000062960	Kdr	6130401C07|Flk-1|Flk1|Krd-1|Ly73|VEGFR-2|VEGFR2|sVEGFR-2	kinase insert domain protein receptor	protein-coding
common_peak2-25579-11-14--0.398197011356905-0.379391706698377	chr19	7040355	7041037	+	0	NA	exon (NM_001290349, exon 4 of 31)	exon (NM_001290349, exon 4 of 31)	3608	NM_008874	18797	Mm.273204	NM_008874	ENSMUSG00000024960	Plcb3	mKIAA4098	phospholipase C, beta 3	protein-coding
unique_peak1-1102-9-2-1.60465090568306-1.87199725847353	chr11	89671666	89672183	+	0	NA	Intergenic	Intergenic	192284	NM_008796	18559	Mm.5062	NM_008796		Pctp	PC-TP|StarD2	phosphatidylcholine transfer protein	protein-coding
common_peak2-32279-9-10--0.269818212233077-1.05503135781948	chrX	16618664	16619094	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-129989	NM_010883	17986	Mm.5014	NM_010883	ENSMUSG00000040138	Ndp	ND|Ndph	Norrie disease (pseudoglioma) (human)	protein-coding
unique_peak1-7187-24-8-1.6232849013254-2.85636458546265	chr9	63074866	63075940	+	0	NA	intron (NM_011840, intron 17 of 21)	intron (NM_011840, intron 17 of 21)	-78635	NM_001163758	207667	Mm.36349	NM_172446	ENSMUSG00000022245	Skor1	AV273001|C230094B15Rik|Corl1|Lbxcor1	SKI family transcriptional corepressor 1	protein-coding
common_peak1-14875-62-52-0.682831004238886-2.04420425592611	chr3	95699851	95702301	+	0	NA	TTS (NM_011797)	TTS (NM_011797)	3232	NM_146134	226548	Mm.306954	NM_146104	ENSMUSG00000015750	Aph1a	6530402N02Rik|APH-1a	anterior pharynx defective 1a homolog (C. elegans)	protein-coding
unique_peak2-35040-4-7--1.02346051385325-1.09384600808989	chr16	3819712	3820135	+	0	NA	Intergenic	L1ME1|LINE|L1	-19052	NM_008762	18312	Mm.377102	NM_008762	ENSMUSG00000059043	Olfr15	MOR256-17|OR3	olfactory receptor 15	protein-coding
common_peak2-32110-12-10-0.189344366450341-0.386243247519795	chr9	100641604	100642264	+	0	NA	intron (NM_009282, intron 4 of 33)	intron (NM_009282, intron 4 of 33)	97892	NM_009282	20842	Mm.42135	NM_009282	ENSMUSG00000037286	Stag1	AU045003|SA-1|Scc3	stromal antigen 1	protein-coding
common_peak1-8355-14-29--1.00767443525087-1.28534286439185	chr10	58323459	58324263	+	0	NA	intron (NM_172788, intron 1 of 9)	Lx8|LINE|L1	47754	NM_172788	237353	Mm.333078	NM_172788	ENSMUSG00000037990	Sh3rf3	4831416G18Rik|Igfbp5-ip|Sh3md4|Sh3rf31	SH3 domain containing ring finger 3	protein-coding
common_peak2-30183-246-387-0.201913224603075-1.20922065983999	chr7	16398870	16402009	+	0	NA	Intergenic	IAPEY3-int|LTR|ERVK	24589	NM_145710	252830	Mm.25863	NM_145710	ENSMUSG00000041583	Obox6	D17Ertd599e	oocyte specific homeobox 6	protein-coding
common_peak1-8101-11-6-0.701338662194009-1.32595962126035	chr1	181352139	181352765	+	0	NA	intron (NM_027188, intron 2 of 11)	intron (NM_027188, intron 2 of 11)	95682	NM_027188	69726	Mm.222338	NM_027188		Smyd3	2410008A19Rik|Zmynd1	SET and MYND domain containing 3	protein-coding
common_peak1-19439-31-95--1.35972382990803-6.02843679705667	chrX	94724479	94725403	+	0	NA	Intergenic	L1MDa|LINE|L1	-152393	NM_001161433	245527	Mm.189270	NM_175540	ENSMUSG00000034457	Eda2r	9430060M22Rik|TNFRSF27|Xedar	ectodysplasin A2 receptor	protein-coding
unique_peak2-39674-6-7--0.434601889619698-0.97990265578305	chr9	108275169	108275591	+	0	NA	intron (NM_011678, intron 11 of 21)	intron (NM_011678, intron 11 of 21)	-19785	NM_053216	112418	Mm.78287	NM_053216	ENSMUSG00000032611	1700102P08Rik	AI593206	RIKEN cDNA 1700102P08 gene	protein-coding
common_peak1-16398-106-101-0.665341513034224-3.40144811043772	chr5	124482314	124484291	+	0	NA	Intergenic	Intergenic	-1033	NM_177876	330192	Mm.4079	NM_177876	ENSMUSG00000066278	Vps37b	2300007F24Rik|AI415429|BC026744	vacuolar protein sorting 37B (yeast)	protein-coding
unique_peak2-38229-3-6--1.22133801201688-1.08602067057793	chr6	115544179	115544543	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	-1767	NM_001101431	70291	Mm.133694	NM_001101431		Mkrn2os	2510049J12Rik	makorin, ring finger protein 2, opposite strand	protein-coding
common_peak1-12031-9-18--1.05831410703937-0.965105923112245	chr17	17294465	17294960	+	0	NA	Intergenic	L1Md_F2|LINE|L1	36365	NM_011765	22759	Mm.436633	NM_011765	ENSMUSG00000095990	Zfp97	NGD16-4	zinc finger protein 97	protein-coding
common_peak2-20339-8-8--0.164702583494742-1.00793137938329	chr10	5207998	5208451	+	0	NA	intron (NM_001079686, intron 16 of 54)	L1Md_F|LINE|L1	56390	NM_001079686	64009	Mm.331626	NM_022027	ENSMUSG00000019769	Syne1	8B|A330049M09Rik|BE692247|C130039F11Rik|CPG2|Myne1|mKIAA1756	spectrin repeat containing, nuclear envelope 1	protein-coding
unique_peak2-39548-3-8--1.58390809140159-1.39487600375387	chr9	69466018	69466454	+	0	NA	Intergenic	B2_Mm1a|SINE|B2	142511	NM_022378	64290	Mm.440890	NM_022378	ENSMUSG00000059246	Foxb1	C43|Fkh5|Foxb1a|Foxb1b|Hfh-e5.1|Mf3|Twh	forkhead box B1	protein-coding
common_peak2-23321-37-35-0.356068070043507-0.626414924887867	chr15	36900835	36902199	+	0	NA	Intergenic	Intergenic	35640	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
common_peak2-19626-21-41--0.822828157512525-1.27781945862486	chr1	37996428	37997497	+	0	NA	Intergenic	Lx2B|LINE|L1	17642	NM_027111	69541	Mm.389117	NM_027111	ENSMUSG00000026085	Lyg1	2300002O18Rik	lysozyme G-like 1	protein-coding
common_peak1-7936-49-64--0.0160839900032705-0.301029995663976	chr1	151500079	151501695	+	0	NA	Intergenic	Intergenic	307527	NM_008869	18783	Mm.4186	NM_008869	ENSMUSG00000056220	Pla2g4a	Pla2g4|cPLA2|cPLA2alpha	phospholipase A2, group IVA (cytosolic, calcium-dependent)	protein-coding
common_peak1-17875-18-42--1.11334560347375-2.03367508793052	chr7	116333461	116334265	+	0	NA	Intergenic	Intergenic	-20041	NM_057173	109594	Mm.360145	NM_057173	ENSMUSG00000036111	Lmo1	Rbtn-1|Rbtn1|Ttg1	LIM domain only 1	protein-coding
unique_peak2-38650-4-5--0.608423014574403-0.909929411522249	chr7	92698461	92698807	+	0	NA	Intergenic	Intergenic	18964	NM_001105183	670940	Mm.469908	NM_001105183	ENSMUSG00000090806	Vmn2r70	EG620835	vomeronasal 2, receptor 70	protein-coding
unique_peak1-4240-10-6-0.549060422951165-1.21398586181642	chr2	125934055	125934752	+	0	NA	intron (NM_029455, intron 10 of 16)	L1Md_T|LINE|L1	43337	NM_029455	75823	Mm.444732	NM_029455	ENSMUSG00000027209	Fam227b	4930525F21Rik	family with sequence similarity 227, member B	protein-coding
common_peak1-11319-47-40-0.577289420148464-1.25612039445446	chr15	85424609	85425698	+	0	NA	Intergenic	(CATATA)n|Simple_repeat|Simple_repeat	-12902	NM_009528	22422	Mm.306946	NM_009528	ENSMUSG00000022382	Wnt7b	Wnt-7b	wingless-type MMTV integration site family, member 7B	protein-coding
common_peak2-24973-23-20-0.32945008173032-0.471456499375596	chr18	6281471	6282024	+	0	NA	Intergenic	Intergenic	-40225	NM_008448	16573	Mm.223744	NM_008448	ENSMUSG00000006740	Kif5b	AL022807|Khc|Khcs|Kns1|Ukhc	kinesin family member 5B	protein-coding
common_peak1-7790-42-64--0.280038485161271-0.485273987300002	chr1	98094481	98096136	+	0	NA	Intergenic	Lx|LINE|L1	-176973	NR_040467	73454	Mm.396229	NR_040467		1700063A18Rik	-	RIKEN cDNA 1700063A18 gene	ncRNA
unique_peak2-39544-9-8-0.0196884049619079-1.03275496310833	chr9	67486250	67486704	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	-78967	NM_001081242	70549	Mm.33645	NM_027458	ENSMUSG00000052698	Tln2	5730421P04Rik|AI507121|AI787438|AL118320|mKIAA0320	talin 2	protein-coding
unique_peak2-35465-5-12--1.40482005414695-1.62698961692433	chr17	43077230	43077825	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-64154	NM_009847	12488	Mm.218637	NM_009847	ENSMUSG00000061665	Cd2ap	AL024079|C78928|METS-1|Mets1	CD2-associated protein	protein-coding
unique_peak1-4569-13-1-2.77847203063777-3.64038867156802	chr3	52631288	52631876	+	0	NA	Intergenic	Intergenic	87936	NR_038079	329639	Mm.131245	NR_038079		Gm2447	100039832|A530017F20	predicted gene 2447	ncRNA
common_peak1-12352-26-27-0.120544170100858-0.335332249061431	chr17	56507227	56507998	+	0	NA	intron (NM_172132, intron 5 of 22)	intron (NM_172132, intron 5 of 22)	42139	NM_172132	193796	Mm.45047	NM_172132	ENSMUSG00000024201	Kdm4b	4732474L06Rik|Jmjd2b|mKIAA0876	lysine (K)-specific demethylase 4B	protein-coding
common_peak2-25864-15-12-0.311725032414564-0.425539671739611	chr19	43563686	43564327	+	0	NA	intron (NM_031396, intron 7 of 10)	intron (NM_031396, intron 7 of 10)	35089	NM_010324	14718	Mm.19039	NM_010324	ENSMUSG00000025190	Got1	AI789014|Got-1|cAspAT|cCAT	glutamate oxaloacetate transaminase 1, soluble	protein-coding
common_peak2-29827-47-44-0.442988328436873-0.901340839087553	chr6	91877681	91878618	+	0	NA	intron (NM_198668, intron 11 of 19)	B1_Mur4|SINE|Alu	23922	NM_198668	381798	Mm.444785	NM_198668	ENSMUSG00000034063	4930590J08Rik	Gm1071	RIKEN cDNA 4930590J08 gene	protein-coding
common_peak1-14580-8-18--1.24270509549601-1.15812782348128	chr3	40846150	40846669	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	40559	NM_027558	70804	Mm.40321	NM_027558	ENSMUSG00000049940	Pgrmc2	4631434O19Rik|5730409G06Rik|DG6|PMBP	progesterone receptor membrane component 2	protein-coding
common_peak1-16414-21-13-0.762134343208631-1.0220094258199	chr5	127632096	127632936	+	0	NA	Intergenic	Intergenic	-18419	NR_045371	75916	Mm.394659	NR_045371		4930572K03Rik	-	RIKEN cDNA 4930572K03 gene	ncRNA
common_peak1-14606-11-17--0.661231417190699-0.58239619684445	chr3	51788921	51789692	+	0	NA	intron (NM_001004176, intron 1 of 4)	intron (NM_001004176, intron 1 of 4)	119622	NM_001004176	433586	Mm.234972	NM_001004176	ENSMUSG00000061143	Maml3	AV234550|BC049812|Mam-2|mKIAA1816	mastermind like 3 (Drosophila)	protein-coding
common_peak2-19904-22-17-0.477359103645092-0.633951497070961	chr1	118321499	118322471	+	0	NA	intron (NM_001077425, intron 14 of 23)	RLTR20B3|LTR|ERVK	740271	NM_001077425	636808	Mm.101576	NM_001077425	ENSMUSG00000070695	Cntnap5a	Caspr5-1|EG636808	contactin associated protein-like 5A	protein-coding
common_peak1-9683-43-40-0.425011180905619-0.817484656603571	chr12	13248455	13249642	+	0	NA	intron (NM_134040, intron 6 of 25)	intron (NM_134040, intron 6 of 25)	6932	NM_134040	104721	Mm.251255	NM_134040	ENSMUSG00000037149	Ddx1	AA409185|DBP-RB	DEAD (Asp-Glu-Ala-Asp) box polypeptide 1	protein-coding
common_peak1-14713-39-26-0.860873744755685-1.85759988472351	chr3	79152749	79154430	+	0	NA	intron (NM_001142953, intron 1 of 4)	L1MC3|LINE|L1	4291	NM_001142953	100233207	Mm.373801	NM_001142953	ENSMUSG00000091685	Gm17359	-	predicted gene, 17359	protein-coding
unique_peak2-37930-7-7--0.200909169701811-0.97990265578305	chr5	146687417	146687940	+	0	NA	intron (NM_007818, intron 2 of 12)	intron (NM_007818, intron 2 of 12)	3752	NM_007818	13112	Mm.332844	NM_007818	ENSMUSG00000056035	Cyp3a11	AI256190|Cyp3a|IIIAm1|Pcn	cytochrome P450, family 3, subfamily a, polypeptide 11	protein-coding
unique_peak1-4476-8-2-1.42025991722641-1.65811743852845	chr3	30261146	30261562	+	0	NA	intron (NM_021442, intron 1 of 2)	intron (NM_021442, intron 1 of 2)	147055	NM_021442	14013	Mm.56965	NM_007963	ENSMUSG00000027684	Mecom	D630039M04Rik|Evi-1|Evi1|Jbo|Mds|Mds1|Mds1-Evi1|Prdm3|Znfpr1b1	MDS1 and EVI1 complex locus	protein-coding
common_peak2-24823-22-37--0.600643408356181-0.808568985218824	chr17	71183561	71184494	+	0	NA	Intergenic	CpG	12090	NM_001164077	21815	Mm.101034	NM_009372	ENSMUSG00000047407	Tgif1	AA959811|AI462167|Tgif	TGFB-induced factor homeobox 1	protein-coding
common_peak1-16689-50-69--0.088342700466014-0.315507670109565	chr6	13838352	13839453	+	0	NA	intron (NR_045995, intron 2 of 2)	L1Md_F2|LINE|L1	17333	NR_045995	76311	Mm.367129	NR_045995	ENSMUSG00000097616	1110019D14Rik	-	RIKEN cDNA 1110019D14 gene	ncRNA
unique_peak1-1725-9-3-1.18961340640422-1.57096726280955	chr13	98492248	98492687	+	0	NA	Intergenic	MT2_Mm|LTR|ERVL	162512	NR_046157	328314	Mm.138047	NR_046157		Gm5086	B230311A21|EG328314	predicted gene 5086	ncRNA
common_peak2-30260-46-56-0.0651059290840603-0.330987277729095	chr7	13033734	13034869	+	0	NA	Intergenic	Intergenic	-26461	NM_001033820	619331	Mm.361832	NM_001033820	ENSMUSG00000034071	Zfp551	9630004E07Rik|Znf551	zinc fingr protein 551	protein-coding
common_peak2-29189-9-5-0.604650905683064-1.21398586181642	chr5	135651806	135652173	+	0	NA	intron (NM_009745, intron 2 of 5)	intron (NM_009745, intron 2 of 5)	7747	NM_009745	12054	Mm.405834	NM_009745	ENSMUSG00000029681	Bcl7b	-	B cell CLL/lymphoma 7B	protein-coding
unique_peak1-4859-12-5-1.06381348436648-1.78669045979184	chr4	129793617	129794130	+	0	NA	intron (NM_026441, intron 1 of 4)	intron (NM_026441, intron 1 of 4)	9073	NM_026441	67898	Mm.20818	NM_026441	ENSMUSG00000028779	Pef1	2600002E23Rik|Peflin	penta-EF hand domain containing 1	protein-coding
unique_peak2-39171-6-6--0.241956811677302-0.947717972411649	chr8	94685396	94685767	+	0	NA	Intergenic	MTE2a|LTR|MaLR	194438	NR_110452	71296	Mm.86664	NR_033641	ENSMUSG00000031736	Crnde	4933436C20Rik	colorectal neoplasia differentially expressed (non-protein coding)	ncRNA
unique_peak2-34747-2-5--1.50241675698448-1.08602067057793	chr15	54790188	54790549	+	0	NA	Intergenic	RMER19C|LTR|ERVK	-38667	NM_001285994	18606	Mm.250256	NM_015744	ENSMUSG00000022425	Enpp2	ATX|Npps2|PD-Ialpha|Pdnp2|lysoPLD	ectonucleotide pyrophosphatase/phosphodiesterase 2	protein-coding
common_peak1-12374-23-12-1.02132778636799-1.44787515926925	chr17	65701475	65702620	+	0	NA	intron (NM_001289485, intron 14 of 15)	intron (NM_001289485, intron 14 of 15)	188075	NM_001008973	381107	Mm.141275	NM_001008973	ENSMUSG00000045036	Tmem232	E130009J12Rik|Gm940|Tes13-L|Tes13-S	transmembrane protein 232	protein-coding
unique_peak1-2307-9-1-2.18961340640422-2.31132995230379	chr15	81421811	81422296	+	0	NA	intron (NM_177821, intron 1 of 30)	intron (NM_177821, intron 1 of 30)	5409	NM_177821	328572	Mm.258397	NM_177821	ENSMUSG00000055024	Ep300	A430090G16|A730011L11|KAT3B|p300|p300 HAT	E1A binding protein p300	protein-coding
unique_peak2-39456-3-6--1.22133801201688-1.08602067057793	chr9	53302020	53302358	+	0	NA	intron (NM_007499, intron 25 of 63)	ID_B1|SINE|B4	42587	NM_007499	11920	Mm.5088	NM_007499	ENSMUSG00000034218	Atm	AI256621|C030026E19Rik	ataxia telangiectasia mutated	protein-coding
unique_peak1-3600-10-6-0.549060422951165-1.21398586181642	chr19	32202511	32203187	+	0	NA	intron (NM_144792, intron 8 of 9)	ORR1B2|LTR|MaLR	-25219	NM_018830	54447	Mm.491229	NM_018830	ENSMUSG00000024887	Asah2	AI585898	N-acylsphingosine amidohydrolase 2	protein-coding
common_peak1-10691-12-9-0.326847890200276-0.459837087125828	chr14	55478835	55479497	+	0	NA	intron (NM_001177705, intron 1 of 1)	intron (NM_001177705, intron 1 of 1)	161	NM_183174	239099	Mm.280994	NM_183174	ENSMUSG00000057156	Homez	mKIAA1443	homeodomain leucine zipper-encoding gene	protein-coding
unique_peak1-1654-10-2-1.77145284428761-2.09384600808989	chr13	60018699	60019220	+	0	NA	Intergenic	Intergenic	-94451	NM_153538	214290	Mm.233082	NM_153538	ENSMUSG00000035248	Zcchc6	6030448M23Rik|AA420405	zinc finger, CCHC domain containing 6	protein-coding
common_peak2-21594-16-14-0.211373046659543-0.364171515310935	chr11	98809810	98810223	+	0	NA	intron (NM_001177302, intron 2 of 9)	B4A|SINE|B4	8991	NM_001177303	19401	Mm.439744	NM_009024	ENSMUSG00000037992	Rara	Nr1b1|RAR|RARalpha1	retinoic acid receptor, alpha	protein-coding
common_peak2-24200-13-8-0.608547029195456-0.660903317613904	chr16	62854075	62854475	+	0	NA	exon (NM_011173, exon 1 of 15)	exon (NM_011173, exon 1 of 15)	115	NM_011173	19128	Mm.127156	NM_011173	ENSMUSG00000022912	Pros1	AW214361	protein S (alpha)	protein-coding
common_peak2-24497-18-21--0.146512467408946-0.306326795069975	chr17	25754489	25755200	+	0	NA	intron (NM_029624, intron 4 of 10)	intron (NM_029624, intron 4 of 10)	38725	NR_045520	76483	Mm.12787	NM_029624	ENSMUSG00000002279	Lmf1	2400010G15Rik|AW822050|Tmem112|cld	lipase maturation factor 1	protein-coding
common_peak2-25490-13-11-0.193509529916613-0.379391706698377	chr19	5084943	5085556	+	0	NA	intron (NM_001001885, intron 1 of 1)	intron (NM_001001885, intron 1 of 1)	228	NM_001001885	381199	Mm.329663	NM_001001885	ENSMUSG00000061451	Tmem151a	AW125688|Gm961|Tmem151	transmembrane protein 151A	protein-coding
unique_peak2-34931-2-5--1.50241675698448-1.08602067057793	chr15	86007697	86007982	+	0	NA	intron (NM_145475, intron 1 of 12)	intron (NM_145475, intron 1 of 12)	8732	NM_145475	223753	Mm.222685	NM_145475	ENSMUSG00000035891	Cerk	AI848610|D330016D08Rik|mKIAA1646	ceramide kinase	protein-coding
common_peak1-8914-65-64-0.469798126448673-1.25880250360973	chr11	51583763	51585558	+	0	NA	intron (NM_025535, intron 1 of 6)	intron (NM_025535, intron 1 of 6)	7495	NM_025535	66397	Mm.196592	NM_025535	ENSMUSG00000020386	Sar1b	2310075M17Rik|2900019I22Rik|CMRD|Sara1b|Sara2|Sarb	SAR1 gene homolog B (S. cerevisiae)	protein-coding
unique_peak2-34744-3-6--1.22133801201688-1.08602067057793	chr15	53558093	53558404	+	0	NA	intron (NM_177225, intron 2 of 4)	intron (NM_177225, intron 2 of 4)	175743	NM_177225	320679	Mm.442455	NM_177225	ENSMUSG00000058656	Samd12	A830094I09Rik	sterile alpha motif domain containing 12	protein-coding
unique_peak2-32990-8-8--0.164702583494742-1.00793137938329	chr10	59977864	59978362	+	0	NA	intron (NR_045556, intron 10 of 68)	(GA)n|Simple_repeat|Simple_repeat	115639	NM_001164374	100302688	Mm.444135	NM_001164374	ENSMUSG00000090439	Gm17455	-	predicted gene, 17455	protein-coding
common_peak1-13394-14-13-0.0918612383000403-0.332077462497413	chr19	47067796	47068340	+	0	NA	intron (NM_001164363, intron 1 of 17)	B3|SINE|B2	-21120	NM_146100	226180	Mm.276251	NM_146100		Ina	AV028420|NF-66|NF66	internexin neuronal intermediate filament protein, alpha	protein-coding
common_peak2-28692-22-38--0.638118113774844-0.887741995158868	chr5	33628802	33629606	+	0	NA	Intergenic	RSINE1|SINE|B4	-11551	NM_001198860	13016	Mm.7286	NM_013502	ENSMUSG00000037373	Ctbp1	BARS|CtBP1-L|CtBP1-S|CtBP3/BARS|D4S115h|D5H4S115|D5H4S115E	C-terminal binding protein 1	protein-coding
common_peak1-7822-19-16-0.315224485411347-0.448200956659575	chr1	125695014	125695953	+	0	NA	intron (NM_199021, intron 3 of 25)	ETnERV2-int|LTR|ERVK	246653	NM_199021	269109	Mm.483255	NM_199021	ENSMUSG00000036815	Dpp10	6430601K09Rik|DPP X|Dprp3	dipeptidylpeptidase 10	protein-coding
common_peak1-8869-136-159-0.448378579628624-2.31430770615654	chr11	35969363	35973854	+	0	NA	intron (NM_001290702, intron 8 of 27)	MER88|LTR|ERVL	-178017	NM_170779	211652	Mm.31267	NM_170779		Wwc1	AA408228|AU017197|BC037006|Kibra|mKIAA0869	WW, C2 and coiled-coil domain containing 1	protein-coding
common_peak1-18823-40-47-0.0740131820299421-0.336492456843107	chr9	7872532	7873630	+	0	NA	promoter-TSS (NM_007464)	promoter-TSS (NM_007464)	89	NM_007464	11796	Mm.2026	NM_007464	ENSMUSG00000032000	Birc3	AW107670|Api1|Api2|Birc2|HIAP2|IAP1|IAP2|MIAP1|MIAP2|MIHB|MIHC|RNF49|cIAP-1|cIAP-2|cIAP1|cIAP2	baculoviral IAP repeat-containing 3	protein-coding
common_peak2-20315-26-48--0.686810751956746-1.2112076832151	chr10	43220643	43222041	+	0	NA	intron (NM_199028, intron 3 of 3)	B3|SINE|B2	22396	NM_199028	331623	Mm.490388	NM_199028	ENSMUSG00000038214	Bend3	mKIAA1553	BEN domain containing 3	protein-coding
unique_peak1-3126-8-2-1.42025991722641-1.65811743852845	chr18	35765380	35765898	+	0	NA	intron (NM_026420, intron 1 of 3)	intron (NM_026420, intron 1 of 3)	7318	NM_026420	67869	Mm.126534	NM_026420	ENSMUSG00000037058	Paip2	2310050K10Rik|AU045972	polyadenylate-binding protein-interacting protein 2	protein-coding
unique_peak1-6275-7-2-1.21412832957703-1.45399745587252	chr7	27502950	27503422	+	0	NA	Intergenic	RMER16-int|LTR|ERVK	-31737	NM_001081148	243881	Mm.294678	NM_001081148	ENSMUSG00000040650	Cyp2b23	EG243881	cytochrome P450, family 2, subfamily b, polypeptide 23	protein-coding
unique_peak1-864-9-1-2.18961340640422-2.31132995230379	chr11	22438544	22438995	+	0	NA	Intergenic	Lx|LINE|L1	26483	NM_153596	103765	Mm.221274	NM_153596	ENSMUSG00000049904	Tmem17	AI503894|AW049890	transmembrane protein 17	protein-coding
common_peak1-12675-85-83-0.56308582534589-2.07614821585747	chr18	37643337	37644970	+	0	NA	promoter-TSS (NM_053142)	promoter-TSS (NM_053142)	-522	NM_053142	93888	Mm.87553	NM_053142	ENSMUSG00000046387	Pcdhb17	Pcdhb16|PcdhbQ|mKIAA1621	protocadherin beta 17	protein-coding
unique_peak2-36948-6-9--0.75652998450706-1.11707584880836	chr3	107739411	107739896	+	0	NA	Intergenic	B4A|SINE|B4	-4990	NM_026672	68312	Mm.458189	NM_026672	ENSMUSG00000004035	Gstm7	0610005A07Rik|AI894236|Cd203c	glutathione S-transferase, mu 7	protein-coding
common_peak1-8699-45-67--0.227104815905467-0.441863235260255	chr11	78363798	78365626	+	0	NA	promoter-TSS (NM_133706)	promoter-TSS (NM_133706)	-475	NM_133706	69071	Mm.29431	NM_133706	ENSMUSG00000037278	Tmem97	1810014L12Rik|AI115531|AL022956|D11Bhm182e	transmembrane protein 97	protein-coding
common_peak2-28396-14-16--0.188246680892695-0.308035960714963	chr4	139796921	139797699	+	0	NA	intron (NM_198610, intron 1 of 9)	intron (NM_198610, intron 1 of 9)	5416	NM_198610	230868	Mm.298731	NM_198610	ENSMUSG00000040972	Igsf21	BC055811|Gm141	immunoglobulin superfamily, member 21	protein-coding
common_peak2-26649-18-27--0.494435770829252-0.528262014464654	chr2	120153778	120154680	+	0	NA	intron (NR_027618, intron 13 of 25)	intron (NR_027618, intron 13 of 25)	-14328	NM_001024145	271844	Mm.24880	NM_001024145	ENSMUSG00000046971	Pla2g4f	4732472I07Rik|Gm647|Pla2zeta	phospholipase A2, group IVF	protein-coding
common_peak2-30443-9-12--0.510826311736872-0.394412252720706	chr7	45017990	45018411	+	0	NA	Intergenic	Intergenic	1501704	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak1-13876-9-28--1.66836758872335-2.52428350728854	chr2	71786818	71787276	+	0	NA	Intergenic	IAPLTR1a_Mm|LTR|ERVK	-32225	NM_001204167	56508	Mm.196153	NM_019688	ENSMUSG00000049044	Rapgef4	1300003D15Rik|5730402K07Rik|6330581N18Rik|EPAC 2|Epac-2|Epac2|mKIAA4040	Rap guanine nucleotide exchange factor (GEF) 4	protein-coding
common_peak2-24916-30-60--0.761061928071014-1.61783625824855	chr17	86962776	86963808	+	0	NA	intron (NM_011104, intron 11 of 14)	intron (NM_011104, intron 11 of 14)	-189912	NM_010137	13819	Mm.1415	NM_010137	ENSMUSG00000024140	Epas1	HIF-2alpha|HIF2A|HLF|HRF|MOP2|bHLHe73	endothelial PAS domain protein 1	protein-coding
unique_peak1-6883-11-3-1.50869358425161-1.95434855131066	chr8	92354655	92355128	+	0	NA	Intergenic	Intergenic	517260	NM_172913	244579	Mm.302755	NM_172913	ENSMUSG00000043668	Tox3	500-9|BC052044|C230068E13|CAGF9|Tnrc9	TOX high mobility group box family member 3	protein-coding
common_peak1-10673-30-11-1.58471290877072-3.34305003325519	chr14	52106429	52107561	+	0	NA	Intergenic	Intergenic	35358	NM_009486	22301	Mm.482572	NM_009486	ENSMUSG00000070448	Vmn2r89	V2r10|V2r11	vomeronasal 2, receptor 89	protein-coding
common_peak2-29599-20-23--0.0968877161299631-0.305855887145851	chr6	51379443	51380136	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-2880	NM_010903	18025	Mm.42138	NM_010903	ENSMUSG00000029832	Nfe2l3	Nrf3	nuclear factor, erythroid derived 2, like 3	protein-coding
unique_peak2-35678-2-6--1.72480917832092-1.26211192963361	chr18	12861647	12862052	+	0	NA	intron (NM_028341, intron 6 of 13)	MTD|LTR|MaLR	-11471	NR_035471	100316699		NR_035471		Mir1948	mmu-mir-1948	microRNA 1948	ncRNA
unique_peak1-4544-7-1-1.79909083029819-1.80617997398389	chr3	37859891	37860356	+	0	NA	intron (NR_040559, intron 2 of 3)	intron (NR_040559, intron 2 of 3)	62388	NR_040559	626410	Mm.389417	NR_040559		Gm20755	-	predicted gene, 20755	ncRNA
common_peak1-19408-29-29-0.205399485006592-0.423354874519384	chrX	73474305	73475445	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-34770	NM_001013760	238829	Mm.292319	NM_001013760	ENSMUSG00000071738	Gm4937	EG238829	predicted gene 4937	protein-coding
common_peak1-14263-28-25-0.352519401680371-0.541406350295756	chr2	155929686	155930981	+	0	NA	intron (NM_029397, intron 1 of 2)	intron (NM_029397, intron 1 of 2)	7368	NM_170598	75710	Mm.27660	NM_029397		Rbm12	5730420G12Rik|9430070C08Rik|AI852903|SWAN|mKIAA0765	RNA binding motif protein 12	protein-coding
common_peak2-26849-23-14-0.814876908900562-1.09492971584134	chr2	154603131	154603698	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-13432	NM_001139512	19383	Mm.221440	NM_023130	ENSMUSG00000027593	Raly	AI663842|Merc	hnRNP-associated with lethal yellow	protein-coding
common_peak1-10627-17-10-0.75886471956774-0.917676348953458	chr14	37185044	37185831	+	0	NA	Intergenic	Intergenic	277286	NM_175008	218921	Mm.212464	NM_175008	ENSMUSG00000096405	4930474N05Rik	-	RIKEN cDNA 4930474N05 gene	protein-coding
unique_peak2-35657-10-6-0.549060422951165-1.21398586181642	chr18	4920502	4920930	+	0	NA	Intergenic	CpG	108232	NR_045881	100038439	Mm.387569	NR_045881	ENSMUSG00000097043	Gm10556	ENSMUSG00000073646	predicted gene 10556	ncRNA
common_peak1-14581-26-27-0.120544170100858-0.335332249061431	chr3	40949954	40950852	+	0	NA	Intergenic	L1_Mus2|LINE|L1	-63435	NM_027558	70804	Mm.40321	NM_027558	ENSMUSG00000049940	Pgrmc2	4631434O19Rik|5730409G06Rik|DG6|PMBP	progesterone receptor membrane component 2	protein-coding
unique_peak1-4927-8-5-0.420259917226415-1.10484139239135	chr4	59196645	59197096	+	0	NA	Intergenic	Intergenic	-5552	NM_011673	22234	Mm.198803	NM_011673	ENSMUSG00000028381	Ugcg	AU043821|C80537|Epcs21|GlcT-1|Ugcgl	UDP-glucose ceramide glucosyltransferase	protein-coding
unique_peak1-5516-7-5-0.214128329577033-1.01466476204226	chr5	137669788	137670321	+	0	NA	Intergenic	Intergenic	-59428	NM_009599	11423	Mm.255464	NM_009599	ENSMUSG00000023328	Ache	-	acetylcholinesterase	protein-coding
common_peak1-17361-82-95-0.308300643584579-0.886732479180838	chr7	34388914	34390625	+	0	NA	Intergenic	Intergenic	48531	NR_045685	353109	Mm.63867	NR_045685		Scgb2b23-ps	1700028O08Rik|Abpbg23-ps|C2y|Scgb2b1|Scgb2b1-ps	secretoglobin, family 2B, member 23, pseudogene	pseudo
common_peak2-22518-32-61--0.675104291167215-1.36066917175235	chr13	54610598	54611910	+	0	NA	intron (NM_176987, intron 1 of 9)	intron (NM_176987, intron 1 of 9)	6088	NM_176987	319719	Mm.376151	NM_176987	ENSMUSG00000043183	Simc1	4732471D19Rik	SUMO-interacting motifs containing 1	protein-coding
unique_peak1-2381-9-4-0.867685311516858-1.36011389749466	chr15	96757342	96757833	+	0	NA	Intergenic	Intergenic	128800	NM_027052	69354	Mm.250980	NM_027052	ENSMUSG00000022464	Slc38a4	1110012E16Rik|1700012A18Rik|Ata3|mATA3|mNAT3	solute carrier family 38, member 4	protein-coding
common_peak2-27079-27-69--1.13773706604973-3.31398737278681	chr3	41564913	41566276	+	0	NA	Intergenic	B3A|SINE|B2	19054	NM_027271	73852	Mm.29006	NM_027271	ENSMUSG00000025766	D3Ertd751e	2810009O15Rik|4930415G15Rik	DNA segment, Chr 3, ERATO Doi 751, expressed	protein-coding
unique_peak2-36873-8-9--0.316705676939792-1.03275496310833	chr3	94310068	94310627	+	0	NA	intron (NM_001082484, intron 8 of 11)	B1_Mur3|SINE|Alu	23703	NR_110353	78784	Mm.44292	NM_172434	ENSMUSG00000028137	Celf3	4930415M08Rik|BRUNOL1|CAGH4|ERDA4|Tnrc4	CUGBP, Elav-like family member 3	protein-coding
unique_peak1-2828-10-4-1.03448725012141-1.5150158574804	chr17	27133417	27134187	+	0	NA	Intergenic	ID_B1|SINE|B4	-21178	NM_001251881	70772	Mm.440437	NM_027544	ENSMUSG00000048731	Ggnbp1	0610031G08Rik|mdf	gametogenetin binding protein 1	protein-coding
unique_peak2-34748-1-8--2.79698201165906-2.05605744720049	chr15	54809082	54809468	+	0	NA	Intergenic	ORR1C2-int|LTR|MaLR	-57574	NM_001285994	18606	Mm.250256	NM_015744	ENSMUSG00000022425	Enpp2	ATX|Npps2|PD-Ialpha|Pdnp2|lysoPLD	ectonucleotide pyrophosphatase/phosphodiesterase 2	protein-coding
common_peak1-10686-28-32-0.00856500046300912-0.30437085424443	chr14	54686115	54687009	+	0	NA	Intergenic	Intergenic	187042	NM_001113358	13135	Mm.319038	NM_010015	ENSMUSG00000022174	Dad1	AI323713	defender against cell death 1	protein-coding
common_peak2-21344-42-43-0.282897709229887-0.572487971606918	chr11	76945160	76946337	+	0	NA	intron (NM_176965, intron 7 of 17)	intron (NM_176965, intron 7 of 17)	-53809	NM_001012309	237859	Mm.156195	NM_001012309	ENSMUSG00000037958	Ccdc55	8030451K07|AI851076|AL022898|NSpr70|NSrp70|Nsrp1	coiled-coil domain containing 55	protein-coding
unique_peak1-7383-9-2-1.60465090568306-1.87199725847353	chrX	75745175	75745693	+	0	NA	intron (NM_027322, intron 2 of 3)	L1Md_F2|LINE|L1	83710	NM_001164275	546336	Mm.211712	NM_027322	ENSMUSG00000047996	Prrg1	2010007L08Rik	proline rich Gla (G-carboxyglutamic acid) 1	protein-coding
common_peak2-21005-14-6-1.09186123830004-1.16633110333236	chr11	26387008	26387427	+	0	NA	intron (NM_027260, intron 9 of 12)	intron (NM_027260, intron 9 of 12)	100133	NR_102382	67030	Mm.18875	NM_025923		Fancl	2010322C19Rik|AW554273|B230118H11Rik|Phf9|Pog|gcd	Fanconi anemia, complementation group L	protein-coding
unique_peak2-39074-4-8--1.19338551529556-1.21878474469819	chr8	72989700	72990098	+	0	NA	intron (NM_178771, intron 1 of 2)	intron (NM_178771, intron 1 of 2)	10943	NM_001122830	234378	Mm.187090	NM_172052	ENSMUSG00000055707	Klhl26	C630013N10Rik|Klkl26	kelch-like 26	protein-coding
common_peak2-24197-6-7--0.434601889619698-0.97990265578305	chr16	58670354	58670740	+	0	NA	exon (NM_007757, exon 1 of 7)	exon (NM_007757, exon 1 of 7)	226	NM_007757	12892	Mm.291519	NM_007757	ENSMUSG00000022742	Cpox	CPX|Cpo|HCP|cac|nct	coproporphyrinogen oxidase	protein-coding
unique_peak1-951-6-3-0.565398110380302-1.08602067057793	chr11	57914178	57914699	+	0	NA	Intergenic	Intergenic	-3217	NM_026949	69125	Mm.28910	NM_026949	ENSMUSG00000020515	Cnot8	1500015I04Rik|1810022F04Rik|AA536816|AU015770|AU043059	CCR4-NOT transcription complex, subunit 8	protein-coding
common_peak1-18449-12-13--0.158578936969966-0.301029995663979	chr8	83601930	83602558	+	0	NA	Intergenic	L1Md_T|LINE|L1	-63439	NM_027554	74841	Mm.246018	NM_027554	ENSMUSG00000038250	Usp38	4631402N15Rik|4833420O05Rik|AA536967|AU044701|AW544820|mKIAA1891	ubiquitin specific peptidase 38	protein-coding
common_peak1-7454-85-90-0.447608607925955-1.47901638068554	chr1	86063838	86065547	+	0	NA	Intergenic	Intergenic	-797551	NM_001037909	620078	Mm.386456	NM_175219	ENSMUSG00000052477	C130026I21Rik	4930565N07Rik|OTTMUSG00000029174	RIKEN cDNA C130026I21 gene	protein-coding
common_peak1-11127-27-16-0.904083109644897-1.48160942223867	chr15	66560382	66561310	+	0	NA	intron (NM_009375, intron 26 of 47)	intron (NM_009375, intron 26 of 47)	58514	NM_009375	21819	Mm.441333	NM_009375	ENSMUSG00000053469	Tg	Tgn|cog	thyroglobulin	protein-coding
common_peak1-18778-12-11-0.0638134843664826-0.337263207250336	chr8	127317297	127317824	+	0	NA	5' UTR (NM_198632, exon 1 of 10)	5' UTR (NM_198632, exon 1 of 10)	641	NM_198632	330863	Mm.422769	NM_198632	ENSMUSG00000036913	Trim67	D130049O21Rik|TNL	tripartite motif-containing 67	protein-coding
common_peak2-22644-16-17--0.0516613591742505-0.301029995663984	chr13	92610229	92610960	+	0	NA	intron (NM_009027, intron 9 of 23)	intron (NM_009027, intron 9 of 23)	290855	NM_009027	19418	Mm.248630	NM_009027		Rasgrf2	6330417G04Rik|AW048350|Grf2|Ras-GRF2	RAS protein-specific guanine nucleotide-releasing factor 2	protein-coding
common_peak1-9028-18-26--0.441968350935117-0.471456499375593	chr11	61929722	61930406	+	0	NA	intron (NM_001029936, intron 1 of 12)	intron (NM_001029936, intron 1 of 12)	39538	NM_001029936	432572	Mm.458025	NM_001029936	ENSMUSG00000042331	Specc1	2810012G08Rik|B230396K10Rik|Cytsb	sperm antigen with calponin homology and coiled-coil domains 1	protein-coding
common_peak1-17547-11-7-0.508693584251613-1.21681515183528	chr7	29505334	29506085	+	0	NA	intron (NM_015796, intron 1 of 6)	B1_Mus2|SINE|Alu	3900	NM_015796	50760	Mm.358659	NM_015796	ENSMUSG00000030598	Fbxo17	Fbg4|Fbx17|Fbxo26	F-box protein 17	protein-coding
common_peak1-9673-14-10-0.439784541720347-0.519648556297791	chr12	8071133	8071834	+	0	NA	Intergenic	Intergenic	87000	NM_009693	238055	Mm.221239	NM_009693	ENSMUSG00000020609	Apob	AI315052|Apo B-100|apob-100|apob-48	apolipoprotein B	protein-coding
unique_peak2-37907-4-5--0.608423014574403-0.909929411522249	chr5	143180866	143181128	+	0	NA	intron (NM_146257, intron 1 of 10)	ZP3AR|Satellite|Satellite	2942	NM_146257	243328	Mm.125942	NM_146257	ENSMUSG00000050822	Slc29a4	ENT4|mPMAT	solute carrier family 29 (nucleoside transporters), member 4	protein-coding
common_peak1-7523-62-89--0.0811016375275901-0.320999317136426	chr1	24678413	24679502	+	0	NA	Intergenic	Lx3_Mus|LINE|L1	-6426	NM_026719	68421	Mm.336563	NM_026719	ENSMUSG00000073725	Lmbrd1	0910001K20Rik|AV347960	LMBR1 domain containing 1	protein-coding
common_peak2-25775-25-36--0.347603460283844-0.465043498729215	chr19	32485452	32486505	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	22272	NR_033198	67188	Mm.391160	NR_033198	ENSMUSG00000097787	2700046G09Rik	-	RIKEN cDNA 2700046G09 gene	ncRNA
unique_peak2-39831-6-6--0.241956811677302-0.947717972411649	chrX	48462878	48463309	+	0	NA	Intergenic	Intergenic	-91898	NM_172413	72065	Mm.43152	NM_172413	ENSMUSG00000050029	Rap2c	2010200P20Rik|AI194294|AL022976	RAP2C, member of RAS oncogene family	protein-coding
unique_peak2-36398-3-5--0.998945590680433-0.96108193396963	chr2	122375861	122376290	+	0	NA	Intergenic	L1_Mur1|LINE|L1	60938	NM_025961	67092	Mm.29975	NM_025961	ENSMUSG00000027199	Gatm	1810003P21Rik|AI314789|AT	glycine amidinotransferase (L-arginine:glycine amidinotransferase)	protein-coding
unique_peak2-38995-13-10-0.319040412000471-0.446472590016315	chr8	45629930	45630576	+	0	NA	Intergenic	Intergenic	-405309	NM_001081286	14107	Mm.27365	NM_001081286	ENSMUSG00000070047	Fat1	2310038E12Rik|AU023433|Fath|mFat1	FAT tumor suppressor homolog 1 (Drosophila)	protein-coding
common_peak1-14569-66-16-2.4310208231755-13.1369037730693	chr3	37727871	37729886	+	0	NA	Intergenic	(TTTTG)n|Simple_repeat|Simple_repeat	-68857	NR_040559	626410	Mm.389417	NR_040559		Gm20755	-	predicted gene, 20755	ncRNA
unique_peak1-3877-7-5-0.214128329577033-1.01466476204226	chr2	13386433	13386865	+	0	NA	intron (NM_001081084, intron 14 of 66)	intron (NM_001081084, intron 14 of 66)	26854	NM_001081084	65969	Mm.313915	NM_001081084	ENSMUSG00000026726	Cubn	AA408369|AL022750|D2Wsu88e	cubilin (intrinsic factor-cobalamin receptor)	protein-coding
unique_peak1-2458-16-2-2.53330114154691-3.78760380288747	chr15	103254939	103255682	+	0	NA	intron (NM_028797, intron 3 of 8)	B3|SINE|B2	5548	NM_028797	74174	Mm.325325	NM_028797	ENSMUSG00000022487	Gtsf1	1700006H03Rik|Cue110	gametocyte specific factor 1	protein-coding
unique_peak1-5236-16-7-1.11826364226806-1.23399803405144	chr5	43982319	43983303	+	0	NA	intron (NM_001135172, intron 1 of 2)	intron (NM_001135172, intron 1 of 2)	-10350	NM_175425	109323	Mm.275553	NM_175425	ENSMUSG00000061535	C1qtnf7	5530401N20Rik|8430425G24Rik|Ctrp7	C1q and tumor necrosis factor related protein 7	protein-coding
common_peak1-11423-23-46--0.832821347168557-1.52341724501299	chr15	99590333	99591210	+	0	NA	intron (NM_028015, intron 1 of 9)	B2_Mm1t|SINE|B2	12175	NM_028015	71949	Mm.390821	NM_028015		Cers5	2310081H14Rik|AU045339|AW544927|Lass5|Trh4	ceramide synthase 5	protein-coding
common_peak1-9489-13-13--0.0288828914198356-0.309074325783021	chr11	107188815	107189373	+	0	NA	intron (NM_145823, intron 2 of 9)	MTE2b|LTR|MaLR	-138399	NM_001161329	68979	Mm.294617	NM_133702	ENSMUSG00000018433	Nol11	1500002M01Rik|AU015220|AU019874	nucleolar protein 11	protein-coding
common_peak2-26485-18-24--0.330937038546373-0.380101753845076	chr2	80339902	80340695	+	0	NA	TTS (NM_016965)	TTS (NM_016965)	-52745	NM_011356	20378	Mm.427436	NM_011356	ENSMUSG00000027004	Frzb	Frp|Sfrp3|frezzled|fritz|frzb-1	frizzled-related protein	protein-coding
common_peak1-7530-42-51-0.0418896097260921-0.319645149473567	chr1	33907340	33908743	+	0	NA	TTS (NM_177235)	TTS (NM_177235)	-12282	NM_001161816	433287	Mm.383632	NM_001161816		Gm15455	AA692849|OTTMUSG00000022109	predicted gene 15455	protein-coding
common_peak1-13896-39-22-1.09219929086214-2.58772382823801	chr2	77268707	77270186	+	0	NA	intron (NM_178723, intron 6 of 9)	Lx7|LINE|L1	-31255	NR_040368	100503106	Mm.443215	NR_040368	ENSMUSG00000085845	Gm13944	OTTMUSG00000015155	predicted gene 13944	ncRNA
common_peak2-20793-5-14--1.61127093161437-1.95509489018123	chr10	121822890	121823240	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-62490	NM_016847	54140	Mm.4351	NM_016847	ENSMUSG00000020123	Avpr1a	AVPR|Avpr1|V1a|V1aR	arginine vasopressin receptor 1A	protein-coding
common_peak2-31596-20-20-0.0957573618124323-0.321718508207528	chr8	121668220	121669298	+	0	NA	intron (NM_019707, intron 7 of 13)	intron (NM_019707, intron 7 of 13)	-199679	NM_024219	68196	Mm.358714	NM_024219	ENSMUSG00000031839	Hsbp1	0610007A03Rik|AA408769|Hsp25	heat shock factor binding protein 1	protein-coding
common_peak1-8169-18-21--0.146512467408946-0.306326795069975	chr10	60817267	60818288	+	0	NA	intron (NM_013753, intron 2 of 19)	B1_Mur1|SINE|Alu	28494	NM_013753	27355	Mm.269699	NM_013753	ENSMUSG00000020092	Pald1	MMPAL|Pald|mKIAA1274	phosphatase domain containing, paladin 1	protein-coding
common_peak1-12347-9-50--2.48281193556728-7.11821385470722	chr17	56199900	56200185	+	0	NA	intron (NM_013733, intron 7 of 13)	B3A|SINE|B2	14370	NM_024432	66530	Mm.28000	NM_024432		Ubxn6	1200008L11Rik|2210415J11Rik|AU040909|Ubxd1|Ubxdc2	UBX domain protein 6	protein-coding
unique_peak1-1994-11-11--0.0762689164695427-0.301029995663976	chr15	77806977	77807673	+	0	NA	Intergenic	MLT1G|LTR|MaLR	-6071	NM_018749	55944	Mm.3955	NM_018749	ENSMUSG00000016554	Eif3d	66/67kDa|AA407891|Eif3s7|eIF3p66	eukaryotic translation initiation factor 3, subunit D	protein-coding
unique_peak2-36787-3-5--0.998945590680433-0.96108193396963	chr3	79542882	79543155	+	0	NA	Intergenic	Intergenic	-1302	NM_212452	381489	Mm.331086	NM_212452		Rxfp1	Gm1018|Lgr7	relaxin/insulin-like family peptide receptor 1	protein-coding
unique_peak1-38-30-4-2.84774731460451-6.69496016203892	chr1	17488699	17489997	+	0	NA	Intergenic	Lx3_Mus|LINE|L1	-102634	NM_053191	94227	Mm.442452	NM_053191	ENSMUSG00000067780	Pi15	P24TI|P25TI|PI-15|SugarCrisp	peptidase inhibitor 15	protein-coding
common_peak1-8168-97-142-0.0241297347138927-0.307839615036113	chr1	195241378	195242033	+	0	NA	Intergenic	Intergenic	-45229	NM_144817	215303	Mm.40329	NM_144817	ENSMUSG00000016179	Camk1g	CLICK-III|CaMKIgamma	calcium/calmodulin-dependent protein kinase I gamma	protein-coding
common_peak2-20427-46-86--0.544947552599926-1.31183424804283	chr10	29361386	29362532	+	0	NA	Intergenic	Intergenic	-106286	NM_028351	72780	Mm.45191	NM_028351	ENSMUSG00000019880	Rspo3	2810459H04Rik|AW742308|Cristin1|Thsd2	R-spondin 3 homolog (Xenopus laevis)	protein-coding
common_peak2-20760-3-5--0.998945590680433-0.96108193396963	chr10	115817413	115817694	+	0	NA	intron (NM_029928, intron 30 of 31)	MTB|LTR|MaLR	-37624	NR_028107	67342	Mm.245800	NM_026098	ENSMUSG00000020164	Kcnmb4os1	1700058G18Rik	potassium large conductance calcium-activated channel, subfamily M, beta member 4, opposite strand 1	ncRNA
common_peak1-18651-67-65-0.500017363424542-1.38423196907585	chr8	111725843	111727631	+	0	NA	Intergenic	ORR1B1|LTR|MaLR	138071	NR_002928	384864	Mm.390083	NR_002928		Gm1943	-	WD repeat domain 70 pseudogene	pseudo
common_peak2-22609-14-9-0.577288065470282-0.630231561310125	chr13	74564405	74564834	+	0	NA	Intergenic	L1_Mus1|LINE|L1	20106	NR_035409	100124641		NR_035409		Mir692-2b	Mirn692-2b	microRNA 692-2b	ncRNA
common_peak2-24767-15-12-0.311725032414564-0.425539671739611	chr17	56291285	56291831	+	0	NA	Intergenic	Intergenic	-10356	NM_025566	66443	Mm.2312	NM_025566	ENSMUSG00000044469	Tnfaip8l1	2600017J23Rik	tumor necrosis factor, alpha-induced protein 8-like 1	protein-coding
unique_peak2-35879-7-35--2.37083417114412-4.72588744919881	chr18	82694205	82695050	+	0	NA	intron (NM_001025245, intron 3 of 3)	RSINE1|SINE|B4	-29228	NM_001025256	17196	Mm.252063	NM_010777	ENSMUSG00000041607	Mbp	C76307|Hmbpr|R75289|golli-mbp|mld|shi	myelin basic protein	protein-coding
common_peak1-12419-36-35-0.309396084725442-0.573175361577103	chr17	74526665	74528066	+	0	NA	Intergenic	Intergenic	-130109	NM_053188	94224	Mm.38933	NM_053188	ENSMUSG00000038541	Srd5a2	5ART2|S5AR 2	steroid 5 alpha-reductase 2	protein-coding
common_peak2-27065-21-31--0.430510734733764-0.49501414494053	chr2	181601288	181602077	+	0	NA	intron (NM_025901, intron 2 of 2)	intron (NM_025901, intron 2 of 2)	2617	NM_025901	67005	Mm.271986	NM_025901	ENSMUSG00000038628	Polr3k	12.3kDa|1500004O14Rik|AI196849|AU014893|C11|RPC10|RPC11	polymerase (RNA) III (DNA directed) polypeptide K	protein-coding
common_peak2-28625-18-18-0.0649916377847664-0.323898164595606	chr5	25499609	25500414	+	0	NA	Intergenic	Intergenic	234167	NM_001004365	242894	Mm.150319	NM_001004365	ENSMUSG00000056367	Actr3b	9630005C02|ARP11|AW047569|Arp3b|Arp3beta	ARP3 actin-related protein 3B	protein-coding
unique_peak1-1519-11-2-1.92373108353046-2.32232533660526	chr13	9042075	9042590	+	0	NA	Intergenic	Intergenic	-47074	NM_027000	69237	Mm.41800	NM_027000	ENSMUSG00000021149	Gtpbp4	2610028C09Rik|Crfg|Gtpbp3|NGB|Nog1	GTP binding protein 4	protein-coding
unique_peak1-6805-9-1-2.18961340640422-2.31132995230379	chr8	71322765	71323146	+	0	NA	intron (NM_001293792, intron 4 of 17)	intron (NM_001293792, intron 4 of 17)	5102	NM_027590	70885	Mm.252421	NM_027590	ENSMUSG00000031864	Ints10	4921521J11Rik|AI462004	integrator complex subunit 10	protein-coding
common_peak1-18988-14-22--0.624345795699369-0.590343908676233	chr9	57521376	57522009	+	0	NA	Intergenic	B3A|SINE|B2	9770	NM_009993	13077	Mm.15537	NM_009993	ENSMUSG00000032310	Cyp1a2	CP12|Cyp1a1|P450-3	cytochrome P450, family 1, subfamily a, polypeptide 2	protein-coding
common_peak1-16456-21-31--0.430510734733764-0.49501414494053	chr5	136049256	136050023	+	0	NA	promoter-TSS (NM_019577)	promoter-TSS (NM_019577)	-726	NM_019577	56221	Mm.31505	NM_019577	ENSMUSG00000004814	Ccl24	CKb-6|MPIF-2|Scya24	chemokine (C-C motif) ligand 24	protein-coding
common_peak1-8594-78-166--0.576883198313517-2.59327667873498	chr10	111009199	111010685	+	0	NA	Intergenic	Intergenic	21387	NR_045344	71321	Mm.410785	NR_045344	ENSMUSG00000097082	4933440J02Rik	-	RIKEN cDNA 4933440J02 gene	ncRNA
unique_peak1-2057-11-4-1.18676548936425-1.68134727924692	chr15	27529397	27529950	+	0	NA	Intergenic	Intergenic	28424	NR_106065	102466808		NR_106065		Mir7117	mmu-mir-7117	microRNA mir-7117	ncRNA
common_peak1-9298-16-24--0.525592547506663-0.561823156887258	chr11	89023530	89024221	+	0	NA	Intergenic	Intergenic	88720	NM_001033266	217071	Mm.342127	NM_001033266	ENSMUSG00000072553	Gm525	-	predicted gene 525	protein-coding
unique_peak2-39799-2-6--1.72480917832092-1.26211192963361	chrX	19238009	19238329	+	0	NA	Intergenic	Intergenic	-398527	NM_021715	60322	Mm.44827	NM_021715	ENSMUSG00000037347	Chst7	2600013M07Rik|C6ST-2|GST5|Gn6st-4	carbohydrate (N-acetylglucosamino) sulfotransferase 7	protein-coding
unique_peak2-34445-0-13--4.64748585253181-3.36932189928148	chr14	21989549	21990145	+	0	NA	intron (NM_134079, intron 4 of 10)	PB1D9|SINE|Alu	94473	NM_001243041	11534	Mm.188734	NM_134079	ENSMUSG00000039197	Adk	2310026J05Rik|5033405D03Rik|AI255373|AI987814|Ak	adenosine kinase	protein-coding
common_peak1-11669-20-15-0.488074784591193-0.590343908676236	chr16	25423716	25424775	+	0	NA	Intergenic	Intergenic	137342	NM_175165	71338	Mm.126851	NM_175165	ENSMUSG00000048399	Tprg	5430420C16Rik|Tprg1	transformation related protein 63 regulated	protein-coding
common_peak2-21617-12-10-0.189344366450341-0.386243247519795	chr11	100619172	100619626	+	0	NA	intron (NM_001081194, intron 1 of 16)	MIR3|SINE|MIR	1693	NM_001081194	380728	Mm.297539	NM_001081194	ENSMUSG00000035355	Kcnh4	BEC2	potassium voltage-gated channel, subfamily H (eag-related), member 4	protein-coding
common_peak1-10795-9-10--0.269818212233077-1.05503135781948	chr14	76616558	76617233	+	0	NA	Intergenic	Intergenic	106197	NM_013745	27275	Mm.21138	NM_013745	ENSMUSG00000022009	Nufip1	Nufip	nuclear fragile X mental retardation protein interacting protein 1	protein-coding
common_peak2-32223-11-21--0.950738034385684-0.991115276827166	chr9	122886680	122887261	+	0	NA	exon (NM_010620, exon 8 of 35)	exon (NM_010620, exon 8 of 35)	26771	NM_010620	209737	Mm.278920	NM_010620	ENSMUSG00000036768	Kif15	3110023M17Rik|3930402I10Rik|D330038N01|HKLP2|Knsl7|b2b1117.1Clo	kinesin family member 15	protein-coding
common_peak1-16899-7-2-1.21412832957703-1.45399745587252	chr6	72315375	72315767	+	0	NA	Intergenic	Intergenic	-3196	NM_025607	66510	Mm.170023	NM_025607	ENSMUSG00000055850	Rnf181	1700047F16Rik|2500002L14Rik|6230415N01Rik|C77350	ring finger protein 181	protein-coding
unique_peak2-39376-6-13--1.2419568116773-1.58711810488664	chr9	20641933	20642565	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	19301	NM_001030290	235033	Mm.297661	NM_001030290	ENSMUSG00000053773	Rdh8	Gm182|prRDH	retinol dehydrogenase 8	protein-coding
unique_peak1-3279-8-1-2.00522241794757-2.05605744720049	chr18	73937734	73938198	+	0	NA	intron (NM_145494, intron 13 of 15)	intron (NM_145494, intron 13 of 15)	-23833	NM_053255	114615	Mm.50642	NM_053255	ENSMUSG00000036941	Elac1	2610018O07Rik|8430417G19Rik	elaC homolog 1 (E. coli)	protein-coding
common_peak1-11117-30-33-0.082212568241534-0.329362479200675	chr15	62392521	62393433	+	0	NA	Intergenic	Intergenic	-341971	NR_003523	67552	Mm.484027	NM_026230		H2afy3	4933432H23Rik	H2A histone family, member Y3	pseudo
unique_peak1-1952-10-3-1.35641534500877-1.75805390616669	chr14	101785291	101785698	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-186208	NM_029680	76627	Mm.31415	NM_029680	ENSMUSG00000042888	Prr30	1700110M21Rik	proline rich 30	protein-coding
common_peak1-14278-9-1-2.18961340640422-2.31132995230379	chr2	156839493	156840052	+	0	NA	3' UTR (NM_001164663, exon 15 of 15)	3' UTR (NM_001164663, exon 15 of 15)	-6961	NM_025853	66934	Mm.25410	NM_025853	ENSMUSG00000027635	Dsn1	1700022L09Rik|AW552447	DSN1, MIND kinetochore complex component, homolog (S. cerevisiae)	protein-coding
common_peak1-15977-11-7-0.508693584251613-1.21681515183528	chr5	31984069	31984633	+	0	NA	intron (NM_153196, intron 1 of 7)	B3A|SINE|B2	-14638	NR_105859	102466677		NR_105859		Mir3473e	mmu-mir-3473e	microRNA mir-3473e	ncRNA
unique_peak2-39209-6-13--1.2419568116773-1.58711810488664	chr8	106059607	106060231	+	0	NA	Intergenic	Intergenic	-67780	NR_045730	71058	Mm.67707	NR_045730		4933400L20Rik	-	RIKEN cDNA 4933400L20 gene	ncRNA
common_peak2-30356-14-21--0.560215458279653-0.519193887192484	chr7	28169745	28170408	+	0	NA	intron (NM_001199236, intron 3 of 18)	intron (NM_001199236, intron 3 of 18)	9449	NM_001199235	80297	Mm.459123	NM_032610	ENSMUSG00000011751	Sptbn4	1700022P15Rik|5830426A08Rik|ROSA62|SpbIV|Spnb4|dyn|lnd|nmf261|nmf379|qv	spectrin beta, non-erythrocytic 4	protein-coding
common_peak1-16185-19-26--0.352200175501782-0.416752705545949	chr5	92082957	92083725	+	0	NA	Intergenic	RSINE1|SINE|B4	112985	NR_045383	73452	Mm.396233	NR_045383		1700063O14Rik	-	RIKEN cDNA 1700063O14 gene	ncRNA
unique_peak1-2191-11-2-1.92373108353046-2.32232533660526	chr15	64621070	64621566	+	0	NA	intron (NM_001291903, intron 5 of 16)	intron (NM_001291903, intron 5 of 16)	132540	NM_001291903	11514	Mm.1425	NM_009623	ENSMUSG00000022376	Adcy8	AC8|AW060868	adenylate cyclase 8	protein-coding
unique_peak2-39822-1-4--1.94898510510411-1.10720996964787	chrX	38564116	38564532	+	0	NA	Intergenic	Intergenic	-190154	NM_016886	53623	Mm.327681	NM_016886	ENSMUSG00000001986	Gria3	2900064I19Rik|GluA3|GluR-C|GluR-K3|Glur-3|Glur3|Gluralpha3	glutamate receptor, ionotropic, AMPA3 (alpha 3)	protein-coding
common_peak1-9517-38-55--0.235902262759073-0.404412720632912	chr11	115535364	115536826	+	0	NA	intron (NM_008163, intron 2 of 5)	intron (NM_008163, intron 2 of 5)	33816	NM_008163	14784	Mm.439649	NM_008163	ENSMUSG00000059923	Grb2	AA408164|Ash	growth factor receptor bound protein 2	protein-coding
common_peak1-7942-8-10--0.454209200689727-1.078512453669	chr1	153048377	153048860	+	0	NA	Intergenic	Intergenic	63454	NR_038011	402734	Mm.337666	NR_038011		C730036E19Rik	-	RIKEN cDNA C730036E19 gene	ncRNA
common_peak1-11376-11-27--1.29866133780599-1.81053432848961	chr15	96461256	96461798	+	0	NA	intron (NM_001166458, intron 1 of 15)	B3|SINE|B2	10866	NM_134086	105727	Mm.103568	NM_134086	ENSMUSG00000023169	Slc38a1	AA408026|AA409865|AL022800|AU015942|NAT2	solute carrier family 38, member 1	protein-coding
common_peak2-27102-28-47--0.532003380899694-0.835790028376013	chr3	5218944	5220063	+	0	NA	intron (NM_030708, intron 1 of 10)	CpG	949	NM_030708	80892	Mm.41522	NM_030708	ENSMUSG00000025255	Zfhx4	A930021B15|C130041O22Rik|Zfh-4|Zfh4	zinc finger homeodomain 4	protein-coding
unique_peak1-2096-27-14-1.08465535528672-1.87214134458703	chr15	37202848	37203516	+	0	NA	intron (NM_026496, intron 2 of 15)	intron (NM_026496, intron 2 of 15)	40391	NM_026496	252973	Mm.244612	NM_026496	ENSMUSG00000022286	Grhl2	0610015A08Rik|BOM|Tcfcp2l3	grainyhead-like 2 (Drosophila)	protein-coding
unique_peak1-7211-9-6-0.382258484346616-1.11707584880836	chr9	70046662	70047180	+	0	NA	Intergenic	Intergenic	-8236	NM_181072	71602	Mm.249311	NM_181072	ENSMUSG00000032220	Myo1e	2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3	myosin IE	protein-coding
common_peak1-13463-125-132-0.568542943558361-3.10805361657823	chr19	60789331	60791584	+	0	NA	Intergenic	Intergenic	-41433	NM_178421	332397	Mm.186390	NM_178421	ENSMUSG00000072437	Nanos1	-	nanos homolog 1 (Drosophila)	protein-coding
common_peak2-25399-11-36--1.70075978137734-3.34305003325519	chr19	6127490	6128414	+	0	NA	intron (NM_026912, intron 1 of 7)	intron (NM_026912, intron 1 of 7)	263	NM_026912	69024	Mm.329629	NM_026912	ENSMUSG00000024787	Snx15	1500032B08Rik|E130013C21Rik	sorting nexin 15	protein-coding
common_peak2-22914-8-6-0.197867495889966-1.03789460276074	chr14	41016501	41016876	+	0	NA	Intergenic	L1Md_F2|LINE|L1	547737	NR_045936	73591	Mm.65499	NR_045936		1700109I08Rik	-	RIKEN cDNA 1700109I08 gene	ncRNA
common_peak1-9852-10-3-1.35641534500877-1.75805390616669	chr12	79944930	79945486	+	0	NA	intron (NM_023721, intron 8 of 8)	intron (NM_023721, intron 8 of 8)	17417	NM_023721	73834	Mm.491124	NM_023721	ENSMUSG00000021114	Atp6v1d	1110004P10Rik|Atp6m|VATD|Vma8	ATPase, H+ transporting, lysosomal V1 subunit D	protein-coding
common_peak1-12565-7-8--0.370834171144123-1.00793137938329	chr18	10182366	10182920	+	0	NA	promoter-TSS (NM_009071)	promoter-TSS (NM_009071)	-853	NM_009071	19877	Mm.6710	NM_009071	ENSMUSG00000024290	Rock1	1110055K06Rik|Rock-I	Rho-associated coiled-coil containing protein kinase 1	protein-coding
unique_peak2-37167-2-7--1.91745425626332-1.45399745587252	chr4	45510517	45510917	+	0	NA	intron (NM_001033306, intron 1 of 5)	intron (NM_001033306, intron 1 of 5)	32983	NM_001033306	230126	Mm.251716	NM_001033306	ENSMUSG00000044813	Shb	BC028832	src homology 2 domain-containing transforming protein B	protein-coding
unique_peak2-38290-7-5-0.214128329577033-1.01466476204226	chr6	134994033	134994428	+	0	NA	Intergenic	Intergenic	-21450	NM_181444	232431	Mm.23575	NM_181444	ENSMUSG00000046733	Gprc5a	Rai3|Raig1	G protein-coupled receptor, family C, group 5, member A	protein-coding
common_peak2-20433-16-25--0.58217607587303-0.633951497070961	chr10	31445219	31445948	+	0	NA	intron (NM_001013411, intron 5 of 6)	L1Md_F2|LINE|L1	-116052	NM_001146349	268291	Mm.295212	NM_001146349	ENSMUSG00000063760	Rnf217	AU016819|Ibrdc1	ring finger protein 217	protein-coding
common_peak2-22729-13-32--1.26592208872068-1.87214134458702	chr13	108214020	108215216	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	-45284	NR_045083	105120	Mm.417700	NR_045083		AI197445	-	expressed sequence AI197445	ncRNA
common_peak1-16388-37-33-0.43853023023548-0.767679714496325	chr5	123930262	123931309	+	0	NA	intron (NM_029594, intron 2 of 2)	intron (NM_029594, intron 2 of 2)	1325	NM_029594	76399	Mm.75049	NM_029594	ENSMUSG00000029437	Il31	1700013B14Rik	interleukin 31	protein-coding
common_peak1-16218-27-25-0.291106232754144-0.488172498216822	chr5	99241253	99242486	+	0	NA	Intergenic	Intergenic	-41589	NM_173404	110075	Mm.209571	NM_173404	ENSMUSG00000029335	Bmp3	9130206H07|9530029I04Rik	bone morphogenetic protein 3	protein-coding
common_peak2-30223-12-4-1.32684789020028-2.04196296489515	chr7	3275043	3275458	+	0	NA	Intergenic	(GGA)n|Simple_repeat|Simple_repeat	-13789	NM_001093764	50918	Mm.29874	NM_016969	ENSMUSG00000068566	Myadm	D7Wsu62e	myeloid-associated differentiation marker	protein-coding
unique_peak1-4130-7-1-1.79909083029819-1.80617997398389	chr2	91078716	91079244	+	0	NA	TTS (NR_015464)	TTS (NR_015464)	1677	NR_015464	606735	Mm.246808	NR_015464	ENSMUSG00000097868	A330069E16Rik	-	RIKEN cDNA A330069E16 gene	ncRNA
unique_peak1-4760-16-8-0.948338640825749-1.02063122982878	chr3	121821554	121822294	+	0	NA	intron (NM_007378, intron 17 of 49)	intron (NM_007378, intron 17 of 49)	74546	NM_007378	11304	Mm.3918	NM_007378	ENSMUSG00000028125	Abca4	AW050280|Abc10|Abcr|D430003I15Rik|RmP	ATP-binding cassette, sub-family A (ABC1), member 4	protein-coding
common_peak1-14326-15-37--1.23576276288793-2.15838218998677	chr2	163602257	163602855	+	0	NA	Intergenic	Intergenic	-26581	NM_001272052	11486	Mm.388	NM_007398	ENSMUSG00000017697	Ada	-	adenosine deaminase	protein-coding
unique_peak2-36100-2-12--2.61789397440441-2.55640854263862	chr2	152829494	152830153	+	0	NA	TTS (NM_029064)	TTS (NM_029064)	11296	NM_178939	68559	Mm.12746	NM_178939	ENSMUSG00000027472	Pdrg1	1110004D19Rik|AU020945|AV006589|Pdrg	p53 and DNA damage regulated 1	protein-coding
common_peak2-28639-31-50--0.447186671158372-0.724428647890298	chr5	29707654	29709339	+	0	NA	Intergenic	Intergenic	-3566	NM_020295	56873	Mm.41572	NM_020295	ENSMUSG00000010721	Lmbr1	1110048D14Rik|AU017641	limb region 1	protein-coding
common_peak2-32368-32-39--0.0428360756677026-0.301029995663967	chrX	103493320	103494124	+	0	NA	Intergenic	L1Md_F3|LINE|L1	-11443	NR_105803	102465963		NR_105803	miRBase:MI0021913	Mir6382	mmu-mir-6382	microRNA mir-6382	ncRNA
common_peak2-26199-10-15--0.643584654991231-0.519648556297791	chr2	25533440	25534065	+	0	NA	intron (NM_177840, intron 2 of 6)	intron (NM_177840, intron 2 of 6)	1446	NM_001276448	620709	Mm.99499	NM_177840	ENSMUSG00000045684	Lcn6	9230101D24Rik	lipocalin 6	protein-coding
unique_peak1-3917-12-4-1.32684789020028-2.04196296489515	chr2	25098346	25098869	+	0	NA	5' UTR (NM_176834, exon 1 of 1)	5' UTR (NM_176834, exon 1 of 1)	158	NM_176834	68846	Mm.24777	NM_176834	ENSMUSG00000044628	Rnf208	1110061N23Rik	ring finger protein 208	protein-coding
unique_peak1-2273-6-1-1.5653981103803-1.56314192529759	chr15	78510163	78510553	+	0	NA	intron (NM_183141, intron 1 of 1)	intron (NM_183141, intron 1 of 1)	38185	NM_183141	207393	Mm.323188	NM_183141	ENSMUSG00000043460	Elfn2	6330514E13|AW048948|BC094219|Lrrc62|Ppp1r29	leucine rich repeat and fibronectin type III, extracellular 2	protein-coding
unique_peak1-3614-41-5-3.1161862041275-10.1018968658685	chr19	34209911	34211519	+	0	NA	intron (NM_024204, intron 2 of 5)	IAPEz-int|LTR|ERVK	29816	NM_024204	52024	Mm.183030	NM_024204	ENSMUSG00000024774	Ankrd22	5430429D21Rik|D19Ertd675e	ankyrin repeat domain 22	protein-coding
unique_peak1-4221-28-4-2.7310310249341-5.93487602603461	chr2	121600102	121601186	+	0	NA	intron (NM_172673, intron 1 of 14)	(TG)n|Simple_repeat|Simple_repeat	32149	NM_172673	228564	Mm.121514	NM_172673	ENSMUSG00000027238	Frmd5	1500032A09Rik|5830442F04|A930004K21Rik|R75430	FERM domain containing 5	protein-coding
common_peak1-10319-34-36-0.172615161372316-0.401350871931209	chr13	69809859	69810968	+	0	NA	Intergenic	MTD|LTR|MaLR	59519	NM_145354	28114	Mm.260009	NM_145354	ENSMUSG00000021595	Nsun2	D13Wsu123e|Misu	NOL1/NOP2/Sun domain family member 2	protein-coding
unique_peak2-34340-2-5--1.50241675698448-1.08602067057793	chr13	98700217	98700598	+	0	NA	intron (NM_012026, intron 34 of 35)	intron (NM_012026, intron 34 of 35)	275713	NM_012026	110596	Mm.252718	NM_012026	ENSMUSG00000021662	Arhgef28	9230110L08Rik|AI323540|D13Bwg1089e|RIP2|Rgnef|RhoGEF|Rhoip2|p190RhoGEF	Rho guanine nucleotide exchange factor (GEF) 28	protein-coding
common_peak1-10133-16-10-0.658832023630764-0.699649909729472	chr13	33028051	33028833	+	0	NA	Intergenic	Intergenic	-28940	NM_011454	20708	Mm.36526	NM_011454	ENSMUSG00000042842	Serpinb6b	NK13|Spi12|ovalbumin	serine (or cysteine) peptidase inhibitor, clade B, member 6b	protein-coding
common_peak1-13457-61-75-0.134821816305755-0.389025993365906	chr19	59344317	59346425	+	0	NA	intron (NM_172523, intron 3 of 15)	B4A|SINE|B4	10003	NM_172523	214084	Mm.268797	NM_172523	ENSMUSG00000025094	Slc18a2	1110037L13Rik|9330105E13|Vmat2	solute carrier family 18 (vesicular monoamine), member 2	protein-coding
common_peak1-15923-48-81--0.386624853383269-0.790891654307598	chr5	24601230	24602754	+	0	NA	intron (NM_145401, intron 1 of 15)	MER5A|DNA|MER1_type	4468	NM_145401	108099	Mm.33649	NM_145401	ENSMUSG00000028944	Prkag2	2410051C13Rik|AAKG|AAKG2|AI854673|H91620p|WPWS	protein kinase, AMP-activated, gamma 2 non-catalytic subunit	protein-coding
common_peak1-8590-77-155--0.500875639306251-1.96843083716487	chr10	108161110	108163220	+	0	NA	intron (NM_009306, intron 3 of 10)	intron (NM_009306, intron 3 of 10)	-24949	NM_203660	368203	Mm.452758	NM_203660		Gm5136	C6.1AL|EG368203	predicted gene 5136	protein-coding
common_peak1-13887-16-10-0.658832023630764-0.699649909729472	chr2	75702739	75703362	+	0	NA	intron (NM_172666, intron 8 of 19)	intron (NM_172666, intron 8 of 19)	32816	NM_172666	228061	Mm.31227	NM_172666	ENSMUSG00000042410	Agps	5832437L22|9930035G10Rik|AW123847|Adaps|Adas|Adhaps|Adps|Aldhpsy|bs2	alkylglycerone phosphate synthase	protein-coding
unique_peak1-2369-7-5-0.214128329577033-1.01466476204226	chr15	93318797	93319189	+	0	NA	intron (NM_001083114, intron 7 of 7)	B1_Mur1|SINE|Alu	90098	NM_001285863	223828	Mm.74208	NM_146062	ENSMUSG00000036167	Pphln1	CR|HSPC206|HSPC232	periphilin 1	protein-coding
unique_peak1-6865-7-3-0.799090830298189-1.23214870625617	chr8	87365173	87365699	+	0	NA	promoter-TSS (NM_001297606)	promoter-TSS (NM_001297606)	-872	NM_009010	19358	Mm.255539	NM_009010	ENSMUSG00000003813	Rad23a	2310040P19Rik|AL024030|HR23A|mHR23A	RAD23a homolog (S. cerevisiae)	protein-coding
common_peak1-12171-45-35-0.69043302390256-1.54911055580825	chr17	29614666	29615646	+	0	NA	Intergenic	Intergenic	-12834	NM_008842	18712	Mm.405293	NM_008842		Pim1	Pim-1	proviral integration site 1	protein-coding
unique_peak2-38341-7-11--0.785871670422967-1.21681515183528	chr7	66109304	66109888	+	0	NA	Intergenic	Intergenic	196024	NM_009728	11982	Mm.135129	NM_009728	ENSMUSG00000025324	Atp10a	Atp10c|pfatp	ATPase, class V, type 10A	protein-coding
common_peak2-28888-9-5-0.604650905683064-1.21398586181642	chr5	88720511	88720864	+	0	NA	Intergenic	Intergenic	22743	NM_001110779	665615	Mm.366701	NM_001110779	ENSMUSG00000090302	Gm7714	EG665615	predicted gene 7714	protein-coding
common_peak1-8471-7-16--1.28837201095215-1.08658567012551	chr10	80179284	80179778	+	0	NA	intron (NM_007460, intron 14 of 30)	intron (NM_007460, intron 14 of 30)	14093	NM_027829	71564	Mm.35802	NM_027829	ENSMUSG00000055862	Izumo4	9030607L17Rik|AI550407	IZUMO family member 4	protein-coding
unique_peak2-37342-7-11--0.785871670422967-1.21681515183528	chr4	132328940	132329456	+	0	NA	intron (NM_011284, intron 4 of 8)	B1F|SINE|Alu	4923	NM_011284	19891	Mm.2870	NM_011284	ENSMUSG00000028884	Rpa2	AA409079|AI325195|AU020965|RPA34|Rf-A2	replication protein A2	protein-coding
common_peak1-8778-14-11-0.314253659636488-0.435191258261915	chr11	8624180	8624882	+	0	NA	Intergenic	Intergenic	-59993	NM_001083587	319939	Mm.337820	NM_001083587	ENSMUSG00000020422	Tns3	BC023928|F830010I22Rik|TEM6|Tens1	tensin 3	protein-coding
unique_peak2-36426-5-8--0.874305337448166-1.10484139239135	chr2	129178196	129178693	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-17194	NR_015474	329514	Mm.207315	NM_177848	ENSMUSG00000074805	Il1bos	9430083I22|Gm14047|OTTMUSG00000015529	interleukin 1 beta, opposite strand	ncRNA
unique_peak2-34337-10-8-0.186490343566457-1.078512453669	chr13	98623484	98623949	+	0	NA	Intergenic	Intergenic	293761	NR_046157	328314	Mm.138047	NR_046157		Gm5086	B230311A21|EG328314	predicted gene 5086	ncRNA
unique_peak1-5978-10-6-0.549060422951165-1.21398586181642	chr6	97352280	97352804	+	0	NA	intron (NM_145148, intron 5 of 23)	intron (NM_145148, intron 5 of 23)	-149768	NM_001081157	320502	Mm.68163	NM_001081157	ENSMUSG00000044086	Lmod3	5430424A14Rik	leiomodin 3 (fetal)	protein-coding
common_peak1-15982-38-48--0.0432571848166781-0.301029995664001	chr5	32138174	32139921	+	0	NA	intron (NM_181281, intron 5 of 10)	intron (NM_181281, intron 5 of 10)	138624	NM_181282	107976	Mm.482126	NM_144541	ENSMUSG00000052139	Bre	6030405P19Rik|AI429776|B830038C02Rik	brain and reproductive organ-expressed protein	protein-coding
common_peak1-19265-46-74--0.330822747247079-0.619228716864119	chr9	113740624	113741971	+	0	NA	intron (NM_001286600, intron 2 of 34)	intron (NM_001286600, intron 2 of 34)	19593	NM_001081960	76499	Mm.222272	NM_029633	ENSMUSG00000033392	Clasp2	1500004F14Rik|8030404L10Rik|C77448|CLASP2beta|mKIAA0627	CLIP associating protein 2	protein-coding
unique_peak1-5928-36-12-1.77888136802666-4.71961104764085	chr6	89446333	89447840	+	0	NA	intron (NM_025351, intron 4 of 7)	intron (NM_025351, intron 4 of 7)	98560	NM_025351	66098	Mm.20313	NM_025351	ENSMUSG00000030086	Chchd6	0710001P09Rik|1700021B03Rik	coiled-coil-helix-coiled-coil-helix domain containing 6	protein-coding
common_peak1-17518-12-21--0.810655633549659-0.713635438203849	chr7	28169766	28170254	+	0	NA	intron (NM_001199236, intron 3 of 18)	intron (NM_001199236, intron 3 of 18)	9515	NM_001199235	80297	Mm.459123	NM_032610	ENSMUSG00000011751	Sptbn4	1700022P15Rik|5830426A08Rik|ROSA62|SpbIV|Spnb4|dyn|lnd|nmf261|nmf379|qv	spectrin beta, non-erythrocytic 4	protein-coding
common_peak2-19624-27-35--0.178379050547076-0.330208782692001	chr1	37430015	37430768	+	0	NA	intron (NM_001290797, intron 13 of 25)	intron (NM_001290797, intron 13 of 25)	4329	NM_001290799	269180	Mm.5294	NM_030266	ENSMUSG00000026113	Inpp4a	107kDa|9630012D15|D130048C09Rik|R74740	inositol polyphosphate-4-phosphatase, type I	protein-coding
common_peak2-29912-26-15-0.927899092158462-1.40782320807777	chr6	115272142	115272734	+	0	NA	Intergenic	Intergenic	-38801	NM_001127330	19016	Mm.3020	NM_011146	ENSMUSG00000000440	Pparg	Nr1c3|PPAR-gamma|PPAR-gamma2|PPARgamma|PPARgamma2	peroxisome proliferator activated receptor gamma	protein-coding
unique_peak1-7059-9-4-0.867685311516858-1.36011389749466	chr9	9199833	9200348	+	0	NA	intron (NM_027823, intron 1 of 22)	intron (NM_027823, intron 1 of 22)	-36198	NR_045754	100579151	Mm.412450	NR_045754		Gm16833	-	predicted gene, 16833	ncRNA
common_peak2-28779-44-77--0.463509384293713-0.951659045366392	chr5	53590409	53591676	+	0	NA	intron (NM_172710, intron 2 of 23)	(CA)n|Simple_repeat|Simple_repeat	13649	NM_172710	231238	Mm.235020	NM_172710	ENSMUSG00000029189	Sel1l3	2310045A20Rik|AI429585|mKIAA0746	sel-1 suppressor of lin-12-like 3 (C. elegans)	protein-coding
unique_peak1-1948-8-4-0.683294323060208-1.21878474469819	chr14	99010254	99010779	+	0	NA	Intergenic	Intergenic	434839	NM_175245	76789	Mm.38912	NM_175245	ENSMUSG00000033186	Mzt1	2410129H14Rik|AI120158|Mozart1	mitotic spindle organizing protein 1	protein-coding
common_peak1-16038-61-48-0.768039485634132-2.35648075798278	chr5	36714098	36716483	+	0	NA	intron (NM_030889, intron 1 of 26)	MLT1B|LTR|MaLR	25498	NM_030889	81840	Mm.34113	NM_030889	ENSMUSG00000029093	Sorcs2	N28137|mKIAA1329	sortilin-related VPS10 domain containing receptor 2	protein-coding
common_peak2-25955-68-45-1.04639882324128-4.26561001599903	chr19	47730625	47731672	+	0	NA	intron (NM_001290825, intron 35 of 53)	intron (NM_001290825, intron 35 of 53)	35384	NM_007732	12821	Mm.1225	NM_007732	ENSMUSG00000025064	Col17a1	BP180|Bpag|Bpag2	collagen, type XVII, alpha 1	protein-coding
common_peak2-30319-16-22--0.405298313788951-0.440610794044987	chr7	24529880	24530643	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-8669	NM_207548	404291	Mm.160375	NM_207548	ENSMUSG00000090411	Vmn1r174	V1rd22	vomeronasal 1 receptor 174	protein-coding
unique_peak2-35210-8-7-0.00522241794757061-1.00793137938329	chr16	87431996	87432497	+	0	NA	intron (NM_001081068, intron 1 of 29)	intron (NM_001081068, intron 1 of 29)	605	NM_001081068	78913	Mm.249005	NM_001081068	ENSMUSG00000052299	Ltn1	4930528H02Rik|AV266914|C87237|Listerin|Rnf160|Zfp294	listerin E3 ubiquitin protein ligase 1	protein-coding
unique_peak2-37396-4-10--1.48289213249054-1.5150158574804	chr4	141290709	141291212	+	0	NA	Intergenic	Intergenic	-11626	NM_001017966	68817	Mm.393721	NM_001017966		Ddi2	1110056G13Rik|1700027M01Rik|9130022E05Rik|AI604911|AU040698	DNA-damage inducible protein 2	protein-coding
common_peak2-27388-59-121--0.605373336690309-2.12988035025192	chr3	87906149	87908294	+	0	NA	intron (NM_001033484, intron 19 of 37)	RSINE1|SINE|B4	21248	NM_001033484	404710	Mm.331133	NM_001033484	ENSMUSG00000028068	Iqgap3	AI593484|D030034H08	IQ motif containing GTPase activating protein 3	protein-coding
unique_peak1-5532-8-3-1.00522241794757-1.39487600375387	chr5	139813966	139814441	+	0	NA	3' UTR (NM_197980, exon 3 of 3)	3' UTR (NM_197980, exon 3 of 3)	6917	NM_197980	68033	Mm.261064	NM_197980		Cox19	1810074D02Rik|2810437L13Rik	cytochrome c oxidase assembly protein 19	protein-coding
common_peak1-10240-6-10--0.894033508256995-1.21398586181642	chr13	53377489	53377909	+	0	NA	intron (NM_013846, intron 1 of 8)	intron (NM_013846, intron 1 of 8)	3779	NM_013846	26564	Mm.342774	NM_013846	ENSMUSG00000021464	Ror2	Ntrkr2|mRor2	receptor tyrosine kinase-like orphan receptor 2	protein-coding
common_peak2-21405-51-46-0.520334973924935-1.1534274303752	chr11	83271006	83271645	+	0	NA	intron (NM_172797, intron 1 of 7)	intron (NM_172797, intron 1 of 7)	5138	NM_172797	118453	Mm.264648	NM_080453	ENSMUSG00000020682	Mmp28	D130023P12	matrix metallopeptidase 28 (epilysin)	protein-coding
common_peak1-15490-11-20--0.883623838527147-0.876666802405043	chr4	109280298	109280752	+	0	NA	Intergenic	L1Md_A|LINE|L1	57452	NM_007671	12580	Mm.1912	NM_007671	ENSMUSG00000028551	Cdkn2c	C77269|INK4c|p18|p18-INK4c|p18-INK6|p18INK4c	cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)	protein-coding
unique_peak2-39450-4-10--1.48289213249054-1.5150158574804	chr9	48985419	48985867	+	0	NA	Intergenic	Intergenic	-72993	NM_177701	235327	Mm.246604	NM_177701		Gm4894	A430041E03|EG235327	predicted gene 4894	protein-coding
common_peak2-28419-51-57-0.216942830475001-0.476339052167849	chr4	141572185	141573815	+	0	NA	Intergenic	Intergenic	-5434	NM_177868	329977	Mm.252019	NM_028429	ENSMUSG00000051435	Fhad1	2900090M10Rik|B230311F11	forkhead-associated (FHA) phosphopeptide binding domain 1	protein-coding
unique_peak1-2628-6-0-2.5653981103803-2.10720996964787	chr16	39820194	39820668	+	0	NA	Intergenic	Intergenic	917973	NM_170599	207683	Mm.245564	NM_170599	ENSMUSG00000022790	Igsf11	1700025L02Rik|BT-IgSF|Igsf13	immunoglobulin superfamily, member 11	protein-coding
common_peak1-19503-23-10-1.26233588587178-1.90052685918624	chrX	164012742	164013607	+	0	NA	intron (NM_001290427, intron 5 of 17)	intron (NM_001290427, intron 5 of 17)	-192543	NM_026662	110639	Mm.272955	NM_026662	ENSMUSG00000025742	Prps2	2610101M19Rik|AA589463|AI464149|Prps-2	phosphoribosyl pyrophosphate synthetase 2	protein-coding
unique_peak2-38069-4-6--0.830815435910851-0.989110657569874	chr6	48445167	48445529	+	0	NA	intron (NM_173428, intron 94 of 102)	intron (NM_173428, intron 94 of 102)	-8990	NR_015597	58894	Mm.31983	NR_015597		Zfp862-ps	4732460K03Rik|AI448302|Zfp862|mKIAA0543	zinc finger protein 862, pseudogene	pseudo
common_peak1-13571-35-25-0.730930540321412-1.34810744351377	chr2	10079500	10080482	+	0	NA	intron (NM_172471, intron 1 of 13)	intron (NM_172471, intron 1 of 13)	4821	NM_172471	209378	Mm.313876	NM_172471	ENSMUSG00000025780	Itih5	4631408O11Rik|5430408M01Rik|E130106B02	inter-alpha (globulin) inhibitor H5	protein-coding
unique_peak1-6363-9-3-1.18961340640422-1.57096726280955	chr7	66446911	66447479	+	0	NA	Intergenic	Lx9|LINE|L1	-36925	NM_173010	22215	Mm.9002	NM_011668	ENSMUSG00000025326	Ube3a	4732496B02|5830462N02Rik|A130086L21Rik|Hpve6a|mKIAA4216	ubiquitin protein ligase E3A	protein-coding
unique_peak2-39006-7-13--1.00826409175941-0.697979855752659	chr8	47673467	47673845	+	0	NA	intron (NM_001001184, intron 9 of 14)	intron (NM_001001184, intron 9 of 14)	28898	NM_001001184	408022	Mm.217385	NM_001001184	ENSMUSG00000038225	Primpol	BC065112|Ccdc111	primase and polymerase (DNA-directed)	protein-coding
common_peak2-22858-45-68--0.248166431433297-0.473550455187116	chr14	26533789	26535480	+	0	NA	3' UTR (NM_001101433, exon 4 of 4)	3' UTR (NM_001101433, exon 4 of 4)	-13866	NR_028021	68173	Mm.444727	NM_026595		Ppifos	4930520F12Rik|Ppifs	peptidylprolyl isomerase F, opposite strand	ncRNA
unique_peak2-38343-3-7--1.41398308995928-1.23214870625617	chr7	113147494	113147935	+	0	NA	Intergenic	Intergenic	-45230	NM_029000	74558	Mm.458429	NM_029000	ENSMUSG00000045868	Gvin1	9130002C22Rik|9830104F22Rik|Iigs1|VLIG|VLIG-1	GTPase, very large interferon inducible 1	protein-coding
common_peak2-20594-6-21--1.894033508257-2.21753093801298	chr10	79681748	79682603	+	0	NA	Intergenic	Intergenic	-7168	NM_023431	68114	Mm.273418	NM_023431	ENSMUSG00000020156	Mum1	2610019J09|9430059D04Rik|UBE-1C2	melanoma associated antigen (mutated) 1	protein-coding
unique_peak2-33474-3-9--1.73591118484664-1.57096726280955	chr11	69365866	69366253	+	0	NA	Intergenic	Intergenic	-3449	NM_001081330	327954	Mm.247478	NM_177617	ENSMUSG00000005237	Dnah2	2900022L05Rik|4930564A01|D130094J20|D330014H01Rik|Dnahc2|Dnhd3	dynein, axonemal, heavy chain 2	protein-coding
unique_peak2-33309-5-5--0.289342836727009-0.909929411522249	chr11	5707142	5707579	+	0	NA	Intergenic	Intergenic	-3561	NM_018870	56012	Mm.219627	NM_018870	ENSMUSG00000020475	Pgam2	-	phosphoglycerate mutase 2	protein-coding
unique_peak1-769-9-6-0.382258484346616-1.11707584880836	chr10	125785998	125786515	+	0	NA	Intergenic	Intergenic	382981	NM_177152	320398	Mm.275586	NM_177152	ENSMUSG00000020105	Lrig3	9030421L11Rik|9130004I02Rik|9430095K15Rik|mKIAA3016	leucine-rich repeats and immunoglobulin-like domains 3	protein-coding
common_peak2-23203-28-36--0.156494245807488-0.329362479200675	chr15	95829772	95830895	+	0	NA	Intergenic	L1M2|LINE|L1	79650	NR_003627	402773	Mm.210567	NM_001033483		D030018L15Rik	-	nuclear receptor coactivator 2 pseudogene	pseudo
common_peak1-10117-105-119-0.414443314914648-1.61411170324017	chr13	30366995	30370027	+	0	NA	Intergenic	RMER19C|LTR|ERVK	-59714	NM_177322	11607	Mm.35062	NM_177322	ENSMUSG00000049115	Agtr1a	1810074K20Rik|AG2S|AI551199|AT1|AT1a|AT2R1|AT2R1A|Agtr-1a|Agtr1|Angtr-1a	angiotensin II receptor, type 1a	protein-coding
common_peak1-15061-10-11--0.228547155712387-0.31137425193576	chr3	123334641	123335156	+	0	NA	intron (NR_121616, intron 3 of 13)	ORR1E|LTR|MaLR	-12530	NM_001293682	83398	Mm.443908	NM_031186	ENSMUSG00000027977	Ndst3	4921531K01Rik|4930511P15Rik|N-HSST 3|NDST-3	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	protein-coding
common_peak1-16581-21-24--0.0743669245084888-0.301029995663979	chr5	147314707	147316036	+	0	NA	intron (NM_026136, intron 3 of 4)	intron (NM_026136, intron 3 of 4)	1396	NM_026136	67410	Mm.463005	NM_026136	ENSMUSG00000079093	4930449I24Rik	-	RIKEN cDNA 4930449I24 gene	protein-coding
unique_peak1-5705-12-2-2.06381348436648-2.79529063155376	chr6	37398656	37399296	+	0	NA	Intergenic	MLT2D|LTR|ERVL	-6828	NM_178661	208647	Mm.169929	NM_178661		Creb3l2	BBF2H7|C530025K05Rik|SCIRR69	cAMP responsive element binding protein 3-like 2	protein-coding
common_peak2-26121-12-7-0.648775985087639-0.697979855752659	chr2	6256029	6256481	+	0	NA	intron (NM_001080548, intron 1 of 14)	intron (NM_001080548, intron 1 of 14)	12452	NM_001080548	98910	Mm.40673	NM_181399	ENSMUSG00000039046	Usp6nl	AI316785|RNTRE|TRE2NL|mKIAA0019	USP6 N-terminal like	protein-coding
unique_peak1-821-8-9--0.316705676939792-1.03275496310833	chr11	6527481	6528002	+	0	NA	Intergenic	RMER6A|LTR|ERVK	-1671	NM_134011	21379	Mm.247761	NM_134011	ENSMUSG00000000384	Tbrg4	2310042P22Rik|AA120735|AA408001|AI527316|Cpr2|R74877|Tb-12|mKIAA0948	transforming growth factor beta regulated gene 4	protein-coding
common_peak1-10145-47-100--0.723370057985247-2.37301319209391	chr13	34652203	34653488	+	0	NA	Intergenic	(TA)n|Simple_repeat|Simple_repeat	91705	NM_025831	66895	Mm.28943	NM_025831	ENSMUSG00000021411	Pxdc1	1300014I06Rik	PX domain containing 1	protein-coding
common_peak2-20753-13-12-0.0780323124966764-0.334470287753051	chr10	111960649	111961218	+	0	NA	Intergenic	Intergenic	-203049	NR_040579	69355	Mm.84337	NR_040579		1700010J16Rik	-	RIKEN cDNA 1700010J16 gene	ncRNA
common_peak2-31946-40-68--0.449548774027071-0.830196118985429	chr9	64736850	64738035	+	0	NA	exon (NM_001162917, exon 21 of 35)	exon (NM_001162917, exon 21 of 35)	61972	NM_144813	214111	Mm.156124	NM_144813	ENSMUSG00000034452	Slc24a1	-	solute carrier family 24 (sodium/potassium/calcium exchanger), member 1	protein-coding
common_peak1-12385-18-20--0.0793982715504091-0.301029995663976	chr17	66749814	66750619	+	0	NA	intron (NM_001114098, intron 3 of 14)	L1_Mus4|LINE|L1	48874	NM_172963	68617	Mm.33421	NM_172963	ENSMUSG00000052105	Mtcl1	1110012J17Rik|Ccdc165|D130071O13|Kiaa0802|Soga2|mKIAA0802|t8219b25	microtubule crosslinking factor 1	protein-coding
common_peak1-15104-65-125--0.48511398402279-1.54378765711118	chr3	133091058	133092602	+	0	NA	Intergenic	RMER6B|LTR|ERVK	115524	NM_001040400	214133	Mm.347816	NM_145989	ENSMUSG00000040943	Tet2	Ayu17-449|E130014J05Rik|mKIAA1546	tet methylcytosine dioxygenase 2	protein-coding
unique_peak1-2765-9-3-1.18961340640422-1.57096726280955	chr17	5893242	5893750	+	0	NA	intron (NM_025664, intron 4 of 17)	intron (NM_025664, intron 4 of 17)	-47784	NM_001113353	20975	Mm.236068	NM_011523	ENSMUSG00000023805	Synj2	AI481647|SJ2|mKIAA0348	synaptojanin 2	protein-coding
common_peak2-21930-34-25-0.681628808860174-1.24799833770813	chr12	24498165	24498859	+	0	NA	Intergenic	Intergenic	283622	NM_001256489	66808	Mm.379124	NM_001256489		9030624G23Rik	-	RIKEN cDNA 9030624G23 gene	protein-coding
common_peak1-11178-15-14-0.105274154947137-0.330004445983672	chr15	76576202	76576982	+	0	NA	intron (NM_198420, intron 3 of 10)	B1_Mus2|SINE|Alu	-22317	NM_176828	223665	Mm.291713	NM_145472	ENSMUSG00000079002	C030006K11Rik	1110033I13Rik	RIKEN cDNA C030006K11 gene	protein-coding
common_peak1-19125-20-9-1.16614668970383-1.52222891542741	chr9	78020937	78021884	+	0	NA	Intergenic	Intergenic	-2311	NR_040401	320295	Mm.131285	NR_040401	ENSMUSG00000097574	C920006O11Rik	-	RIKEN cDNA C920006O11 gene	ncRNA
unique_peak2-39372-10-10--0.103016273628528-0.301029995663987	chr9	15069077	15069682	+	0	NA	intron (NM_144933, intron 10 of 11)	intron (NM_144933, intron 10 of 11)	14932	NM_144933	234959	Mm.44151	NM_144933	ENSMUSG00000031935	Med17	77kDa|C330002H14Rik|Crsp6|Trap80	mediator complex subunit 17	protein-coding
common_peak1-12514-21-14-0.662598669657717-0.879255460030357	chr18	5619606	5620676	+	0	NA	intron (NM_011546, intron 1 of 7)	intron (NM_011546, intron 1 of 7)	-27706	NR_033552	791318	Mm.84339	NR_033552	ENSMUSG00000063087	Gm10125	ENSMUSG00000063087|Zeb1os	predicted gene 10125	ncRNA
common_peak1-8342-8-11--0.579740082773585-1.14218153353838	chr10	50583652	50584182	+	0	NA	Intergenic	Intergenic	-31540	NM_011376	20464	Mm.4774	NM_011376	ENSMUSG00000019913	Sim1	bHLHe14|mSIM1	single-minded homolog 1 (Drosophila)	protein-coding
common_peak1-19399-25-38--0.423552313517143-0.564346534703877	chrX	57053014	57054015	+	0	NA	Intergenic	Intergenic	-199127	NM_007979	14071	Mm.391283	NM_007979	ENSMUSG00000031138	F9	AW111646|Cf-9|Cf9	coagulation factor IX	protein-coding
common_peak2-25753-61-69-0.253466312804374-0.581432897068483	chr19	29250759	29252250	+	0	NA	Intergenic	L2a|LINE|L2	41735	NR_029778	724062		NR_029778		Mir101b	Mirn101b|mir-101b	microRNA 101b	ncRNA
unique_peak1-3275-10-1-2.35641534500877-2.57096726280955	chr18	73626664	73627181	+	0	NA	Intergenic	Intergenic	-105437	NM_001039214	240396	Mm.24131	NM_001039214	ENSMUSG00000037253	Mex3c	A130001D14Rik|BC035207|BM-013|Rkhd2	mex3 homolog C (C. elegans)	protein-coding
common_peak2-23304-145-226-0.0551092458388691-0.348035233751242	chr15	36281860	36283934	+	0	NA	Intergenic	B4A|SINE|B4	-69995	NM_013923	30945	Mm.5181	NM_013923	ENSMUSG00000022280	Rnf19a	AA032313|Dorfin|Rnf19|UIP117|Ubce7ip2|XYbp	ring finger protein 19A	protein-coding
unique_peak2-38524-6-7--0.434601889619698-0.97990265578305	chr7	45676533	45676922	+	0	NA	Intergenic	Intergenic	843177	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak1-4180-22-2-3.06232160436625-5.33257845442771	chr2	113639686	113640606	+	0	NA	intron (NM_009162, intron 2 of 5)	MIRb|SINE|MIR	29102	NM_009162	20394	Mm.4836	NM_009162	ENSMUSG00000023236	Scg5	7B2|AI325031|Sgne-1|Sgne1	secretogranin V	protein-coding
common_peak1-7456-38-33-0.483989818048191-0.907712525274296	chr1	86703203	86704508	+	0	NA	Intergenic	Intergenic	791530	NM_030194	109032	Mm.335802	NM_030194	ENSMUSG00000070034	Sp110	5031415C07Rik|52kDa|5830484A20Rik|ENSMUSG00000075603|Ifi75|Ipr1	Sp110 nuclear body protein	protein-coding
unique_peak1-7101-17-4-1.89636824331768-2.60953805094651	chr9	41584847	41585657	+	0	NA	Intergenic	Intergenic	195243	NR_029822	387236		NR_029822	miRBase:MI0000725	Mir125b-1	Mirn125b|Mirn125b-1	microRNA 125b-1	ncRNA
common_peak1-18735-75-116--0.13129772784012-0.379925531631896	chr8	123717562	123718567	+	0	NA	Intergenic	(TCCA)n|Simple_repeat|Simple_repeat	66479	NM_008024	14241	Mm.5111	NM_008024	ENSMUSG00000097084	Foxl1	FREAC7|Fkh6|fkh-6	forkhead box L1	protein-coding
common_peak1-18801-18-12-0.612479433087259-0.739965416525508	chr9	67043059	67043770	+	0	NA	Intergenic	Intergenic	41119	NR_029576	387185		NR_029576		Mir190a	Mir190|Mirn190|mir-190|mmu-mir-190|mmu-mir-190a	microRNA 190a	ncRNA
unique_peak2-39828-1-7--2.62705701021674-1.80617997398389	chrX	48314485	48314894	+	0	NA	Intergenic	Intergenic	-18802	NM_001190332	385354	Mm.393050	NM_001190332		Frmd7	EG665849|Gm1533	FERM domain containing 7	protein-coding
common_peak1-18760-18-11-0.727956650507195-0.876666802405043	chr8	126736205	126737018	+	0	NA	Intergenic	B1_Mur4|SINE|Alu	-18683	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
common_peak1-7696-14-10-0.439784541720347-0.519648556297791	chr1	82830505	82831191	+	0	NA	Intergenic	MTEa|LTR|MaLR	-5210	NM_010472	15463	Mm.392569	NM_010472	ENSMUSG00000026159	Agfg1	AU045498|C130049H11Rik|C85612|D730048C23Rik|Hrb|RAB|Rip	ArfGAP with FG repeats 1	protein-coding
common_peak2-25407-38-57--0.286528335829042-0.468749305398727	chr19	38042002	38043696	+	0	NA	exon (NM_001099634, exon 17 of 53)	exon (NM_001099634, exon 17 of 53)	75218	NM_001099634	226101	Mm.34674	NM_177035	ENSMUSG00000048612	Myof	2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3	myoferlin	protein-coding
unique_peak1-2810-15-9-0.690236655668294-0.732381977911291	chr17	23999219	23999913	+	0	NA	Intergenic	Intergenic	-5473	NM_020487	57256	Mm.386785	NM_020487	ENSMUSG00000024116	Prss21	1700023E12Rik|TESP5|mT4|testisin	protease, serine 21	protein-coding
common_peak1-16894-66-54-0.737123950901181-2.47363556430882	chr6	72244396	72246051	+	0	NA	Intergenic	Intergenic	-9381	NM_001282071	20388	Mm.46033	NM_147779	ENSMUSG00000056370	Sftpb	AI562151|SF-B|SP-B|Sftp-3|Sftp3	surfactant associated protein B	protein-coding
unique_peak2-35315-2-5--1.50241675698448-1.08602067057793	chr17	14942627	14943051	+	0	NA	Intergenic	L1Md_T|LINE|L1	-111570	NM_011581	21826	Mm.26688	NM_011581	ENSMUSG00000023885	Thbs2	TSP2|Thbs-2	thrombospondin 2	protein-coding
unique_peak2-38705-12-19--0.673152109799724-0.546772548767014	chr7	109986016	109986942	+	0	NA	Intergenic	L1Md_T|LINE|L1	19306	NM_001011536	258168	Mm.377368	NM_001011536	ENSMUSG00000060888	Olfr566	GA_x5J8B7W5P47-379997-380552|MOR14-7P	olfactory receptor 566	protein-coding
common_peak2-30595-60-92--0.1848669494875-0.425896051280179	chr7	80992816	80994543	+	0	NA	Intergenic	Lx|LINE|L1	22869	NR_102375	100861851		NR_102375		Gm21269	-	predicted gene, 21269	ncRNA
common_peak1-13180-9-5-0.604650905683064-1.21398586181642	chr19	16372690	16373284	+	0	NA	intron (NM_008139, intron 2 of 6)	Lx|LINE|L1	16507	NR_105832	102465218		NR_105832	miRBase:MI0021942	Mir496b	mmu-mir-496b	microRNA mir-496b	ncRNA
common_peak1-19066-14-9-0.577288065470282-0.630231561310125	chr9	69455937	69456576	+	0	NA	Intergenic	Intergenic	151505	NR_037296	100526560		NR_037296	miRBase:MI0014106	Mir3109	mmu-mir-3109	microRNA 3109	ncRNA
common_peak2-23354-70-95-0.0350044156542424-0.311156440617038	chr15	43281949	43282842	+	0	NA	intron (NR_046064, intron 1 of 2)	intron (NR_046064, intron 1 of 2)	26187	NR_046064	100038728	Mm.244168	NR_046064	ENSMUSG00000072592	Gm10373	ENSMUSG00000072592	predicted gene 10373	ncRNA
common_peak1-10426-85-80-0.615553245240027-2.37808287570547	chr13	100650483	100651780	+	0	NA	Intergenic	ORR1B2|LTR|MaLR	19507	NM_013732	27220	Mm.75498	NM_013732	ENSMUSG00000021647	Cartpt	Cart	CART prepropeptide	protein-coding
unique_peak2-36571-8-40--2.35232958667051-5.35800994256092	chr2	170526706	170527699	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	-30105	NM_029761	76829	Mm.41633	NM_029761	ENSMUSG00000027560	Dok5	2700055C10Rik	docking protein 5	protein-coding
common_peak2-32280-24-38--0.492192316094532-0.631311512744354	chrX	17571233	17572310	+	0	NA	Intergenic	ORR1D2-int|LTR|MaLR	-151225	NM_028568	73547	Mm.159027	NM_028568	ENSMUSG00000025043	Dusp21	1700094E07Rik|DSP21	dual specificity phosphatase 21	protein-coding
common_peak1-11868-37-55--0.281361850571785-0.475408985215012	chr16	92695090	92696166	+	0	NA	intron (NM_001111022, intron 3 of 6)	intron (NM_001111022, intron 3 of 6)	1946	NM_001111023	12394	Mm.4081	NM_009821	ENSMUSG00000022952	Runx1	AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b	runt related transcription factor 1	protein-coding
common_peak2-23258-25-60--1.06888743221778-2.69560598044942	chr15	25412008	25413841	+	0	NA	Intergenic	Intergenic	68977	NR_027376	432939	Mm.146555	NM_001013791		Gm5468	100040583|EG432939	predicted gene 5468	ncRNA
unique_peak1-5980-9-1-2.18961340640422-2.31132995230379	chr6	97366331	97366886	+	0	NA	intron (NM_145148, intron 4 of 23)	B1F1|SINE|Alu	-163834	NM_001081157	320502	Mm.68163	NM_001081157	ENSMUSG00000044086	Lmod3	5430424A14Rik	leiomodin 3 (fetal)	protein-coding
common_peak2-21444-14-18--0.348711353085941-0.360333814299795	chr11	86623010	86623716	+	0	NA	Intergenic	Intergenic	-2201	NM_026191	67487	Mm.260627	NM_026191	ENSMUSG00000018425	Dhx40	2410016C14Rik|ARG147|DDX40|PAD	DEAH (Asp-Glu-Ala-His) box polypeptide 40	protein-coding
common_peak2-23534-118-120-0.60492944584798-3.24880821992275	chr15	77881920	77884447	+	0	NA	intron (NM_007583, intron 1 of 3)	intron (NM_007583, intron 1 of 3)	66527	NM_007583	12300	Mm.277338	NM_007583		Cacng2	AW060990|B230105C07Rik|B930041E13Rik|stargazer|stargazin|stg|wag|waggler	calcium channel, voltage-dependent, gamma subunit 2	protein-coding
unique_peak2-37535-0-7--3.84013093047421-1.80617997398389	chr5	25217678	25218092	+	0	NA	Intergenic	MYSERV-int|LTR|ERVK	-6270	NM_020570	57434	Mm.143767	NM_020570	ENSMUSG00000028933	Xrcc2	4921524O04Rik|8030409M04Rik|RAD51|RecA	X-ray repair complementing defective repair in Chinese hamster cells 2	protein-coding
unique_peak1-4286-8-2-1.42025991722641-1.65811743852845	chr2	143150786	143151230	+	0	NA	Intergenic	RMER1B|Other|Other	-220861	NM_008792	18549	Mm.294493	NM_008792	ENSMUSG00000027419	Pcsk2	6330411F23Rik|AI839700|Nec-2|Nec2|PC2|Phpp-2|SPC2	proprotein convertase subtilisin/kexin type 2	protein-coding
common_peak1-12864-51-43-0.615492206965276-1.44728952217472	chr18	75682800	75684424	+	0	NA	intron (NM_201354, intron 7 of 11)	(TC)n|Simple_repeat|Simple_repeat	9313	NR_045879	100038353	Mm.440724	NR_045879	ENSMUSG00000097712	Gm10532	ENSMUSG00000073534	predicted gene 10532	ncRNA
common_peak2-26279-15-14-0.105274154947137-0.330004445983672	chr2	30758649	30759559	+	0	NA	promoter-TSS (NM_022415)	promoter-TSS (NM_022415)	-287	NM_022415	64292	Mm.28768	NM_022415	ENSMUSG00000050737	Ptges	2410099E23Rik|D2Ertd369e|Pges|mPGES|mPGES-1	prostaglandin E synthase	protein-coding
unique_peak2-35136-3-7--1.41398308995928-1.23214870625617	chr16	30600440	30600784	+	0	NA	5' UTR (NM_177632, exon 1 of 1)	5' UTR (NM_177632, exon 1 of 1)	803	NM_177632	224093	Mm.28244	NM_177632	ENSMUSG00000046546	Fam43a	Tuf1	family with sequence similarity 43, member A	protein-coding
unique_peak1-203-11-4-1.18676548936425-1.68134727924692	chr1	85702552	85703114	+	0	NA	Intergenic	Intergenic	-435692	NM_001037909	620078	Mm.386456	NM_175219	ENSMUSG00000052477	C130026I21Rik	4930565N07Rik|OTTMUSG00000029174	RIKEN cDNA C130026I21 gene	protein-coding
common_peak1-11947-14-6-1.09186123830004-1.16633110333236	chr17	5023844	5024450	+	0	NA	intron (NM_001085355, intron 1 of 19)	B3|SINE|B2	29073	NM_001085355	239985	Mm.133401	NM_001085355	ENSMUSG00000069729	Arid1b	8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235	AT rich interactive domain 1B (SWI-like)	protein-coding
common_peak1-18682-12-19--0.673152109799724-0.546772548767014	chr8	119777797	119778455	+	0	NA	Intergenic	Intergenic	-2793	NM_001163262	74440	Mm.233181	NM_028941	ENSMUSG00000034390	Cmip	4933407C03Rik|5830471E12Rik|AI314065|AI464126	c-Maf inducing protein	protein-coding
unique_peak1-888-9-3-1.18961340640422-1.57096726280955	chr11	32567173	32567686	+	0	NA	intron (NM_001271349, intron 1 of 11)	B3|SINE|B2	24874	NM_001271347	103583	Mm.28017	NM_134015	ENSMUSG00000020271	Fbxw11	2310065A07Rik|AA536858|BTRC2|BTRCP2|Fbxw1b|HOS	F-box and WD-40 domain protein 11	protein-coding
common_peak1-16374-58-85--0.130314819811601-0.348707102394169	chr5	122849441	122850990	+	0	NA	intron (NM_019824, intron 2 of 6)	intron (NM_019824, intron 2 of 6)	8278	NM_019824	56378	Mm.275942	NM_019824	ENSMUSG00000029465	Arpc3	1110006A04Rik|21kDa|AA408672|AI788639|p21-Ar|p21Arc	actin related protein 2/3 complex, subunit 3	protein-coding
unique_peak1-2123-10-0-3.35641534500877-3.31132995230379	chr15	53155340	53155863	+	0	NA	intron (NM_010162, intron 1 of 10)	intron (NM_010162, intron 1 of 10)	22137	NM_010162	14042	Mm.309395	NM_010162		Ext1	AA409028	exostoses (multiple) 1	protein-coding
unique_peak1-7154-21-4-2.24756117037887-3.74275476306371	chr9	57951316	57952253	+	0	NA	intron (NM_001166282, intron 3 of 19)	intron (NM_001166282, intron 3 of 19)	-1752	NM_029212	382077	Mm.335193	NM_029212	ENSMUSG00000037716	Ccdc33	4930535E21Rik|Gm1117|Tzip1	coiled-coil domain containing 33	protein-coding
common_peak1-8831-27-45--0.532016005161777-0.779916249636879	chr11	23632767	23633734	+	0	NA	TTS (NM_028304)	TTS (NM_028304)	37720	NM_009044	19696	Mm.4869	NM_009044	ENSMUSG00000020275	Rel	c-Rel	reticuloendotheliosis oncogene	protein-coding
unique_peak2-35474-3-6--1.22133801201688-1.08602067057793	chr17	44476372	44476795	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	151062	NM_172621	224796	Mm.37666	NM_172621	ENSMUSG00000023959	Clic5	5730531E12Rik|B330005L24|Gm322|jbg	chloride intracellular channel 5	protein-coding
unique_peak1-1525-6-4-0.24347001549294-0.989110657569874	chr13	13168994	13169462	+	0	NA	Intergenic	(TCTCTG)n|Simple_repeat|Simple_repeat	-71631	NM_031191	18811	Mm.88796	NM_031191	ENSMUSG00000079092	Prl2c2	MRP-1|PLF-1|Plf|Plf1	prolactin family 2, subfamily c, member 2	protein-coding
common_peak2-29955-86-89-0.483782697702678-1.69060945777504	chr6	117906628	117908369	+	0	NA	Intergenic	Intergenic	-20145	NM_001173372	108017	Mm.250392	NM_033648		Fxyd4	0610008I02Rik|AI267073|Chif	FXYD domain-containing ion transport regulator 4	protein-coding
common_peak1-15575-79-124--0.136949117485467-0.392295196716639	chr4	127021066	127022325	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	9630	NM_008127	14621	Mm.56906	NM_008127	ENSMUSG00000046623	Gjb4	Cnx30.3|Cx30.3|Gjb-4	gap junction protein, beta 4	protein-coding
unique_peak1-7432-9-1-2.18961340640422-2.31132995230379	chrX	167172133	167172640	+	0	NA	Intergenic	Intergenic	-755537	NR_029457	654820	Mm.34441	NM_001039559	ENSMUSG00000072844	G530011O06Rik	-	RIKEN cDNA G530011O06 gene	ncRNA
unique_peak1-7397-7-0-2.79909083029819-2.40823996531185	chrX	104947857	104948129	+	0	NA	Intergenic	L1M3e|LINE|L1	-39936	NM_001271008	213449	Mm.444635	NM_001163104	ENSMUSG00000073007	Fam46d	Gm377	family with sequence similarity 46, member D	protein-coding
common_peak2-21473-19-37--0.845240186781899-1.27201509741564	chr11	87592285	87593427	+	0	NA	intron (NM_172449, intron 23 of 31)	intron (NM_172449, intron 23 of 31)	-14430	NM_010824	17523	Mm.4668	NM_010824	ENSMUSG00000009350	Mpo	mKIAA4033	myeloperoxidase	protein-coding
unique_peak2-34430-6-9--0.75652998450706-1.11707584880836	chr14	20806292	20806863	+	0	NA	Intergenic	Intergenic	-10106	NM_001285909	14702	Mm.41737	NM_010315	ENSMUSG00000043004	Gng2	82	guanine nucleotide binding protein (G protein), gamma 2	protein-coding
unique_peak2-36774-4-5--0.608423014574403-0.909929411522249	chr3	68693772	68694168	+	0	NA	Intergenic	MTD|LTR|MaLR	20462	NM_001167996	68725	Mm.45741	NM_001167996	ENSMUSG00000046999	1110032F04Rik	AI115547	RIKEN cDNA 1110032F04 gene	protein-coding
unique_peak2-32983-4-12--1.72390023199434-1.85743853830261	chr10	59635801	59636346	+	0	NA	Intergenic	Intergenic	45935	NM_016803	53374	Mm.12866	NM_016803	ENSMUSG00000057337	Chst3	C6ST|C6ST-1|GST-0	carbohydrate (chondroitin 6/keratan) sulfotransferase 3	protein-coding
unique_peak1-4658-20-6-1.68071986253359-2.41165147706372	chr3	90446167	90447000	+	0	NA	Intergenic	Intergenic	-11641	NM_199422	381493	Mm.291525	NM_199422	ENSMUSG00000063767	S100a7a	AY465109|Gm1020|S100A7L1|S100A7f|S100a15|S100a15a|S100a17l1	S100 calcium binding protein A7A	protein-coding
common_peak2-25733-18-33--0.774543690021988-1.00055860626307	chr19	24279811	24280663	+	0	NA	intron (NM_011597, intron 1 of 22)	B1_Mus2|SINE|Alu	19279	NM_011597	21873	Mm.104744	NM_011597	ENSMUSG00000024812	Tjp2	ZO-2	tight junction protein 2	protein-coding
unique_peak1-3158-7-1-1.79909083029819-1.80617997398389	chr18	37999033	37999577	+	0	NA	intron (NM_001301256, intron 3 of 3)	MIR|SINE|MIR	15009	NR_105945	102465592		NR_105945		Mir6979	mmu-mir-6979	microRNA mir-6979	ncRNA
common_peak2-29496-48-49-0.32707096146009-0.682033507942397	chr6	31370238	31371759	+	0	NA	intron (NM_013791, intron 2 of 17)	intron (NM_013791, intron 2 of 17)	22170	NM_013791	27418	Mm.238038	NM_013791		Mkln1	A130067F06Rik|AU015903|BB154892	muskelin 1, intracellular mediator containing kelch motifs	protein-coding
common_peak2-26685-10-7-0.356415345008769-1.12966497611638	chr2	125247154	125247583	+	0	NA	intron (NM_007993, intron 6 of 65)	intron (NM_007993, intron 6 of 65)	84806	NM_007993	14118	Mm.271644	NM_007993	ENSMUSG00000027204	Fbn1	AI536462|B430209H23|Fib-1|Tsk	fibrillin 1	protein-coding
common_peak1-11880-42-55--0.0650255941904199-0.303022200133692	chr16	95701834	95703484	+	0	NA	intron (NM_133659, intron 2 of 10)	intron (NM_133659, intron 2 of 10)	49313	NM_133659	13876	Mm.164531	NM_133659	ENSMUSG00000040732	Erg	D030036I24Rik	avian erythroblastosis virus E-26 (v-ets) oncogene related	protein-coding
common_peak2-21259-13-15--0.221527969362231-0.308519316180257	chr11	69418111	69418725	+	0	NA	intron (NM_013415, intron 1 of 6)	intron (NM_013415, intron 1 of 6)	1044	NM_013415	11932	Mm.235204	NM_013415	ENSMUSG00000041329	Atp1b2	Amog|Atpb-2	ATPase, Na+/K+ transporting, beta 2 polypeptide	protein-coding
common_peak1-16445-18-16-0.225456309978012-0.397739447719379	chr5	135064009	135064788	+	0	NA	intron (NM_020022, intron 2 of 10)	L1_Mus4|LINE|L1	5838	NM_020022	19718	Mm.332739	NM_020022	ENSMUSG00000023104	Rfc2	2610008M13Rik|40kDa|AI326953|Recc2	replication factor C (activator 1) 2	protein-coding
common_peak2-29665-31-35-0.0553136693708112-0.313095283157747	chr6	72242704	72244280	+	0	NA	Intergenic	Intergenic	-11112	NM_001282071	20388	Mm.46033	NM_147779	ENSMUSG00000056370	Sftpb	AI562151|SF-B|SP-B|Sftp-3|Sftp3	surfactant associated protein B	protein-coding
unique_peak1-7235-14-4-1.57728806547028-2.4322161449009	chr9	75777614	75778415	+	0	NA	Intergenic	Lx5|LINE|L1	-84770	NM_173731	208982	Mm.82306	NM_173731	ENSMUSG00000007908	Hmgcll1	BC037381	3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1	protein-coding
common_peak1-17738-18-8-1.14299414978604-1.45476480588849	chr7	80825021	80825717	+	0	NA	Intergenic	RSINE1|SINE|B4	6080	NR_033604	244061	Mm.484605	NR_033604		Gm4971	EG244061	Smad nuclear interacting protein 1 pseudogene	pseudo
common_peak2-23124-27-20-0.599228528116475-0.90781512069806	chr14	99324776	99325312	+	0	NA	Intergenic	Intergenic	120311	NM_175245	76789	Mm.38912	NM_175245	ENSMUSG00000033186	Mzt1	2410129H14Rik|AI120158|Mozart1	mitotic spindle organizing protein 1	protein-coding
unique_peak1-4524-12-9-0.326847890200276-0.459837087125828	chr3	30246794	30247431	+	0	NA	intron (NM_021442, intron 1 of 2)	intron (NM_021442, intron 1 of 2)	161297	NM_021442	14013	Mm.56965	NM_007963	ENSMUSG00000027684	Mecom	D630039M04Rik|Evi-1|Evi1|Jbo|Mds|Mds1|Mds1-Evi1|Prdm3|Znfpr1b1	MDS1 and EVI1 complex locus	protein-coding
common_peak1-13132-7-8--0.370834171144123-1.00793137938329	chr19	9082991	9083479	+	0	NA	exon (NM_009643, exon 5 of 5)	exon (NM_009643, exon 5 of 5)	19461	NM_001286518	66395	Mm.203866	NM_009643	ENSMUSG00000069833	Ahnak	DY6	AHNAK nucleoprotein (desmoyokin)	protein-coding
common_peak2-26862-37-48--0.0887167726293896-0.31027100108714	chr2	155691608	155692449	+	0	NA	intron (NR_024487, intron 7 of 9)	intron (NR_024487, intron 7 of 9)	-31438	NM_027788	71405	Mm.260918	NM_027788		Fam83c	5530400B04Rik	family with sequence similarity 83, member C	protein-coding
common_peak2-26795-12-10-0.189344366450341-0.386243247519795	chr2	148041379	148041831	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-168900	NM_010446	15376	Mm.938	NM_010446	ENSMUSG00000037025	Foxa2	HNF3-beta|HNF3beta|Hnf-3b|Hnf3b|Tcf-3b|Tcf3b	forkhead box A2	protein-coding
common_peak1-18858-29-34--0.0169929363298555-0.304177167304369	chr9	21072988	21073720	+	0	NA	intron (NM_153583, intron 5 of 9)	intron (NM_153583, intron 5 of 9)	3625	NM_153583	235040	Mm.440165	NM_153583	ENSMUSG00000002820	Atg4d	9830134P12Rik|APG4-D|Apg4d|Atg4dl|Autl4	autophagy related 4D, cysteine peptidase	protein-coding
common_peak1-11956-24-13-0.985854980710112-1.52081014994907	chr17	6000953	6001859	+	0	NA	intron (NM_001113352, intron 5 of 25)	intron (NM_001113352, intron 5 of 25)	-6174	NM_001290698	20975	Mm.236068	NM_011523	ENSMUSG00000023805	Synj2	AI481647|SJ2|mKIAA0348	synaptojanin 2	protein-coding
common_peak2-22801-81-43-1.41261798437127-8.02352149117619	chr14	8356370	8357541	+	0	NA	Intergenic	L1Md_T|LINE|L1	44125	NM_001270842	100041874	Mm.350858	NM_001270842	ENSMUSG00000079364	Gm3558	ENSMUSG00000079364	predicted gene 3558	protein-coding
common_peak1-17715-18-21--0.146512467408946-0.306326795069975	chr7	79323453	79324494	+	0	NA	intron (NM_001024703, intron 14 of 22)	intron (NM_001024703, intron 14 of 22)	127508	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding
common_peak2-25396-16-6-1.31090872021046-1.49151883326344	chr19	5799903	5800302	+	0	NA	non-coding (NR_002847, exon 1 of 1)	non-coding (NR_002847, exon 1 of 1)	2569	NR_002847	72289	Mm.298256	NR_002847	ENSMUSG00000092341	Malat1	2210401K01Rik|9430072K23Rik|AI647968|Neat2	metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)	ncRNA
unique_peak2-37016-7-7--0.200909169701811-0.97990265578305	chr3	123266734	123267151	+	0	NA	intron (NR_121616, intron 6 of 13)	Lx5|LINE|L1	55426	NM_001293682	83398	Mm.443908	NM_031186	ENSMUSG00000027977	Ndst3	4921531K01Rik|4930511P15Rik|N-HSST 3|NDST-3	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	protein-coding
common_peak1-9862-34-52--0.345851927561933-0.532475415427916	chr12	80318614	80320044	+	0	NA	intron (NM_030017, intron 5 of 6)	Lx6|LINE|L1	9428	NM_030017	77974	Mm.274373	NM_030017	ENSMUSG00000021123	Rdh12	A930033N07Rik	retinol dehydrogenase 12	protein-coding
common_peak2-24181-26-15-0.927899092158462-1.40782320807777	chr16	50528525	50529359	+	0	NA	intron (NR_040379, intron 1 of 5)	CpG	327	NR_040379	619312	Mm.427671	NR_040379		G730013B05Rik	-	RIKEN cDNA G730013B05 gene	ncRNA
common_peak2-27881-98-140-0.062217341031757-0.338107591505897	chr4	106315669	106317180	+	0	NA	Intergenic	Intergenic	-7250	NM_001285783	230577	Mm.134029	NM_172272	ENSMUSG00000043572	Pars2	BC027073	prolyl-tRNA synthetase (mitochondrial)(putative)	protein-coding
unique_peak2-34122-5-26--2.45926783816932-3.68490442130631	chr13	21782677	21783525	+	0	NA	Intergenic	L1MC4a|LINE|L1	-11771	NM_001011820	258067	Mm.453831	NM_001011820	ENSMUSG00000096404	Olfr1359	MOR256-35|MOR256-60	olfactory receptor 1359	protein-coding
unique_peak1-4458-8-0-3.00522241794757-2.70926996097583	chr2	174345138	174345759	+	0	NA	Intergenic	Intergenic	-47006	NM_025531	66390	Mm.182294	NM_025531	ENSMUSG00000016257	Slmo2	2310042G06Rik|AA407013	slowmo homolog 2 (Drosophila)	protein-coding
common_peak2-19934-36-71--0.690603915274558-1.57728862130808	chr1	127774176	127774955	+	0	NA	intron (NM_145100, intron 2 of 2)	Lx9|LINE|L1	34226	NM_145100	72585	Mm.490405	NM_145100		Lypd1	2700050C12Rik|AI853408|C530008O16Rik|Lynx2|Lypdc1	Ly6/Plaur domain containing 1	protein-coding
common_peak2-25486-51-48-0.460213981487365-0.985819031340023	chr19	5016435	5017095	+	0	NA	Intergenic	RMER10B|LTR|ERVL	-7241	NM_007854	13340	Mm.4930	NM_007854	ENSMUSG00000024891	Slc29a2	Der12|Ent2|Hnp36	solute carrier family 29 (nucleoside transporters), member 2	protein-coding
unique_peak1-40-10-3-1.35641534500877-1.75805390616669	chr1	19850012	19850641	+	0	NA	Intergenic	Intergenic	-496209	NR_045734	75028	Mm.417820	NR_045734		4930486I03Rik	-	RIKEN cDNA 4930486I03 gene	ncRNA
common_peak2-23308-21-37--0.67843824817735-0.907273387067392	chr15	36607864	36608918	+	0	NA	Intergenic	L1Md_A|LINE|L1	-69663	NM_008774	18458	Mm.371570	NM_008774	ENSMUSG00000022283	Pabpc1	PABP|Pabp1|PabpI|Pabpl1|ePAB	poly(A) binding protein, cytoplasmic 1	protein-coding
common_peak2-27153-22-10-1.18785248645011-1.74319850844462	chr3	30504863	30505435	+	0	NA	intron (NM_030557, intron 2 of 7)	intron (NM_030557, intron 2 of 7)	4140	NM_001289621	80732	Mm.200378	NM_030557	ENSMUSG00000037730	Mynn	2810011C24Rik|AA415053|AI661031|AW049392|Mynr|SBBIZ1	myoneurin	protein-coding
unique_peak2-39648-3-11--1.99894559068043-1.95434855131066	chr9	106345231	106345752	+	0	NA	intron (NM_001110272, intron 3 of 4)	intron (NM_001110272, intron 3 of 4)	4518	NM_145919	68644	Mm.268925	NM_145919	ENSMUSG00000042210	Abhd14a	1110013B16Rik|AW558221|Dorz1	abhydrolase domain containing 14A	protein-coding
unique_peak2-38013-14-16--0.188246680892695-0.308035960714963	chr6	31164059	31165078	+	0	NA	intron (NR_110469, intron 1 of 3)	URR1B|DNA|MER1_type	3906	NR_110470	232685	Mm.443019	NM_144555		Lincpint	MNCb-1768|Pint|linc-Pint	long intergenic non-protein coding RNA, Trp53 induced transcript	ncRNA
common_peak2-22592-17-10-0.75886471956774-0.917676348953458	chr13	72630364	72630973	+	0	NA	Intergenic	Intergenic	135344	NR_030701	328287	Mm.235072	NR_030701		Gm20554	D430050G20	predicted gene, 20554	ncRNA
unique_peak2-32501-3-7--1.41398308995928-1.23214870625617	chr1	50479927	50480298	+	0	NA	Intergenic	Intergenic	-504255	NM_019790	56363	Mm.245154	NM_019790	ENSMUSG00000026109	Tmeff2	4832418D20Rik|7630402F16Rik|TR-2	transmembrane protein with EGF-like and two follistatin-like domains 2	protein-coding
unique_peak2-33241-1-6--2.43441193227435-1.56314192529759	chr10	122794595	122794942	+	0	NA	intron (NR_045514, intron 1 of 5)	intron (NR_045514, intron 1 of 5)	93636	NM_001252387	268354	Mm.51939	NM_182807	ENSMUSG00000044071	Fam19a2	6330575M02|FAM19A2 TAFA-2|TAFA2|Tafa-2	family with sequence similarity 19, member A2	protein-coding
unique_peak1-6868-14-6-1.09186123830004-1.16633110333236	chr8	88116400	88116994	+	0	NA	Intergenic	Intergenic	-37527	NM_019794	56445	Mm.475573	NM_019794	ENSMUSG00000031701	Dnaja2	1500017M13Rik|2010206B19Rik|DNAJ|DNJ3|Dnaj3|HIRIP4|PRO3015|mDj3	DnaJ (Hsp40) homolog, subfamily A, member 2	protein-coding
common_peak1-14630-24-33--0.294252938482622-0.390124689062463	chr3	54807048	54807981	+	0	NA	Intergenic	MLT1A0|LTR|MaLR	51463	NM_007628	12427	Mm.4815	NM_007628	ENSMUSG00000027793	Ccna1	-	cyclin A1	protein-coding
common_peak1-9512-80-80-0.510725763484728-1.67258053447009	chr11	115070309	115072455	+	0	NA	intron (NM_001033393, intron 8 of 9)	intron (NM_001033393, intron 8 of 9)	22581	NM_001033393	320534	Mm.260587	NM_001033393	ENSMUSG00000045980	Tmem104	C630005D06Rik|mFLJ00021	transmembrane protein 104	protein-coding
common_peak2-19867-25-42--0.564414849356992-0.820829064533854	chr1	92933609	92934869	+	0	NA	intron (NM_001111312, intron 1 of 12)	intron (NM_001111312, intron 1 of 12)	-15782	NM_001111311	16978	Mm.45039	NM_008515	ENSMUSG00000026305	Lrrfip1	AU024550|Fliiap1	leucine rich repeat (in FLII) interacting protein 1	protein-coding
unique_peak2-32770-2-6--1.72480917832092-1.26211192963361	chr1	172499426	172499793	+	0	NA	intron (NM_001109985, intron 1 of 9)	intron (NM_001109985, intron 1 of 9)	-12368	NM_027528	70729	Mm.487078	NM_027528	ENSMUSG00000038473	Nos1ap	6330408P19Rik|Capon	nitric oxide synthase 1 (neuronal) adaptor protein	protein-coding
common_peak2-19869-23-19-0.399839409621718-0.538442145997695	chr1	93161335	93162073	+	0	NA	intron (NM_026454, intron 3 of 9)	intron (NM_026454, intron 3 of 9)	14808	NM_026454	67921	Mm.337238	NM_026454	ENSMUSG00000034343	Ube2f	2510010F15Rik|AI851109	ubiquitin-conjugating enzyme E2F (putative)	protein-coding
common_peak1-18990-29-21-0.652858461977813-1.06916698217164	chr9	57560508	57561485	+	0	NA	intron (NM_153799, intron 1 of 6)	B1_Mur1|SINE|Alu	4620	NM_153799	353190	Mm.268104	NM_153799		Edc3	AA517853|Lsm16|Yjdc	enhancer of mRNA decapping 3 homolog (S. cerevisiae)	protein-coding
unique_peak1-5611-6-1-1.5653981103803-1.56314192529759	chr6	105021313	105021723	+	0	NA	Intergenic	B3|SINE|B2	421144	NR_040297	100503536	Mm.366960	NR_040297		Gm19757	-	predicted gene, 19757	ncRNA
unique_peak1-180-10-4-1.03448725012141-1.5150158574804	chr1	74408618	74409139	+	0	NA	intron (NM_001033345, intron 1 of 9)	intron (NM_001033345, intron 1 of 9)	196	NM_001033345	241112	Mm.310460	NM_001033345	ENSMUSG00000073650	Catip	Gm216	ciliogenesis associated TTC17 interacting protein	protein-coding
common_peak2-26008-18-10-0.853487532591054-1.03889213727317	chr19	55867571	55868078	+	0	NA	intron (NM_001142920, intron 4 of 11)	intron (NM_001142920, intron 4 of 11)	51524	NM_001142923	21416	Mm.139815	NM_009333	ENSMUSG00000024985	Tcf7l2	TCF4B|TCF4E|Tcf-4|Tcf4|mTcf-4B|mTcf-4E	transcription factor 7 like 2, T cell specific, HMG box	protein-coding
common_peak2-19972-7-6--0.00826409175941478-0.97990265578305	chr1	133221804	133222148	+	0	NA	intron (NM_001081011, intron 13 of 22)	intron (NM_001081011, intron 13 of 22)	-45836	NM_019777	56489	Mm.386783	NM_019777	ENSMUSG00000042349	Ikbke	AW558201|IKK-i|IKKepsilon|Ikki	inhibitor of kappaB kinase epsilon	protein-coding
common_peak2-24627-13-7-0.778472030637769-0.817533494790411	chr17	34655246	34655726	+	0	NA	Intergenic	Intergenic	-1189	NM_030747	624681	Mm.471592	NM_030747	ENSMUSG00000058762	Btnl6	EG624681|Gm6519|NG13	butyrophilin-like 6	protein-coding
common_peak1-18286-9-6-0.382258484346616-1.11707584880836	chr8	41375108	41375612	+	0	NA	Intergenic	Intergenic	-3053	NM_030610	80857	Mm.425526	NM_030610	ENSMUSG00000031603	Fgf20	-	fibroblast growth factor 20	protein-coding
common_peak2-22210-21-14-0.662598669657717-0.879255460030357	chr12	111944098	111944839	+	0	NA	Intergenic	B3|SINE|B2	-9863	NM_010480	15519	Mm.1843	NM_010480	ENSMUSG00000021270	Hsp90aa1	86kDa|89kDa|AL024080|AL024147|Hsp86-1|Hsp89|Hsp90|Hspca|hsp4	heat shock protein 90, alpha (cytosolic), class A member 1	protein-coding
common_peak1-18568-7-27--2.00826409175941-3.02827458119512	chr8	105565324	105565800	+	0	NA	Intergenic	L1M4|LINE|L1	-256551	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
unique_peak1-2197-11-6-0.701338662194009-1.32595962126035	chr15	66795962	66796431	+	0	NA	intron (NM_008681, intron 1 of 15)	intron (NM_008681, intron 1 of 15)	5007	NM_008681	17988	Mm.30837	NM_008681	ENSMUSG00000005125	Ndrg1	CAP43|CMT4D|DRG1|HMSNL|NMSL|Ndr1|Ndrl|PROXY1|RTP|TDD5	N-myc downstream regulated gene 1	protein-coding
unique_peak2-33390-3-7--1.41398308995928-1.23214870625617	chr11	50224451	50224976	+	0	NA	intron (NM_172557, intron 7 of 17)	RSINE1|SINE|B4	19900	NM_172557	216724	Mm.390400	NM_172557	ENSMUSG00000020375	Rufy1	3000002E04Rik|Rabip4|ZFYVE12	RUN and FYVE domain containing 1	protein-coding
unique_peak1-7263-12-9-0.326847890200276-0.459837087125828	chr9	92273836	92274583	+	0	NA	Intergenic	L1_Mur3|LINE|L1	69994	NM_001033184	78459	Mm.179195	NM_001033184	ENSMUSG00000074139	1700057G04Rik	-	RIKEN cDNA 1700057G04 gene	protein-coding
common_peak1-16977-31-33-0.137775829562784-0.350690697593776	chr6	86683763	86685239	+	0	NA	Intergenic	Intergenic	-1129	NM_011818	23885	Mm.321452	NM_011818	ENSMUSG00000001157	Gmcl1	2810049L19Rik|Gcl|mglc-1	germ cell-less homolog 1 (Drosophila)	protein-coding
unique_peak1-3934-9-0-3.18961340640422-3.01029995663981	chr2	27471329	27471657	+	0	NA	Intergenic	MTD|LTR|MaLR	-61228	NM_011305	20181	Mm.24624	NM_011305	ENSMUSG00000015846	Rxra	9530071D11Rik|Nr2b1|RXRalpha1	retinoid X receptor alpha	protein-coding
common_peak1-13651-35-36-0.221916892833554-0.435893058718175	chr2	26444607	26445466	+	0	NA	intron (NM_178444, intron 4 of 9)	intron (NM_178444, intron 4 of 9)	-1841	NR_029541	387145		NR_029541		Mir126a	Mir126|Mirn126|mmu-mir-126|mmu-mir-126a	microRNA 126a	ncRNA
unique_peak1-2581-8-5-0.420259917226415-1.10484139239135	chr16	30258265	30258776	+	0	NA	3' UTR (NM_027904, exon 2 of 2)	3' UTR (NM_027904, exon 2 of 2)	9098	NM_027904	71756	Mm.290614	NM_027904	ENSMUSG00000023176	Cpn2	1300018K11Rik	carboxypeptidase N, polypeptide 2	protein-coding
unique_peak2-34143-5-14--1.61127093161437-1.95509489018123	chr13	23697965	23698419	+	0	NA	intron (NM_001177653, intron 1 of 1)	intron (NM_001177653, intron 1 of 1)	14771	NM_001177653	319179	Mm.440391	NM_178194	ENSMUSG00000047246	Hist1h2be	-	histone cluster 1, H2be	protein-coding
common_peak1-14826-22-17-0.477359103645092-0.633951497070961	chr3	90602318	90603452	+	0	NA	Intergenic	L1Md_F3|LINE|L1	72057	NM_207263	384997	Mm.316644	NM_207263	ENSMUSG00000042250	Pglyrp4	Gm1478|Gm413	peptidoglycan recognition protein 4	protein-coding
unique_peak1-1992-9-3-1.18961340640422-1.57096726280955	chr15	74923788	74924264	+	0	NA	Intergenic	Intergenic	18353	NM_001099217	100041546	Mm.482110	NM_001099217	ENSMUSG00000022584	Ly6c2	Ly-6C.2|Ly-6C2	lymphocyte antigen 6 complex, locus C2	protein-coding
common_peak1-10505-7-11--0.785871670422967-1.21681515183528	chr14	61439517	61440038	+	0	NA	intron (NM_027436, intron 10 of 18)	MERVL-int|LTR|ERVL	36374	NR_040642	70478	Mm.274650	NM_027436	ENSMUSG00000021993	Mipep	5730405E07Rik|MIP	mitochondrial intermediate peptidase	protein-coding
common_peak1-14924-94-182--0.386110270434727-1.49401552164514	chr3	100685030	100686633	+	0	NA	intron (NM_178594, intron 2 of 5)	intron (NM_178594, intron 2 of 5)	-40585	NM_001165952	229644	Mm.189351	NM_194343	ENSMUSG00000033233	Trim45	4921530N01Rik	tripartite motif-containing 45	protein-coding
common_peak2-22327-11-10-0.0492619656143161-0.31137425193576	chr13	23538182	23538632	+	0	NA	Intergenic	Intergenic	-15521	NR_015492	320842	Mm.487476	NR_015492	ENSMUSG00000085024	C230035I16Rik	-	RIKEN cDNA C230035I16 gene	ncRNA
common_peak1-12399-27-48--0.623163893219973-1.00060938969219	chr17	70852452	70853349	+	0	NA	intron (NM_027712, intron 1 of 9)	intron (NM_027712, intron 1 of 9)	-18550	NM_001128180	224997	Mm.311840	NM_027712	ENSMUSG00000003279	Dlgap1	4933422O14Rik|9630002F18|AI845682|AI848168|BB075781|D17Bwg0511e|GKAP/SAPAP|GKPA/SAPAP|Gkap|Sapap1|mKIAA4162	discs, large (Drosophila) homolog-associated protein 1	protein-coding
common_peak2-25321-28-26-0.298071617657994-0.481798116163919	chr18	75457151	75457986	+	0	NA	promoter-TSS (NR_045393)	promoter-TSS (NR_045393)	-585	NR_045393	100503117	Mm.250517	NR_045393		2010010A06Rik	5033420E22Rik	RIKEN cDNA 2010010A06 gene	ncRNA
unique_peak1-2189-8-2-1.42025991722641-1.65811743852845	chr15	64220992	64221546	+	0	NA	Intergenic	Intergenic	-6788	NM_010026	13196	Mm.277236	NM_010026	ENSMUSG00000022377	Asap1	AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19	ArfGAP with SH3 domain, ankyrin repeat and PH domain1	protein-coding
common_peak1-19041-52-34-0.978976973320733-2.93575584472861	chr9	65214046	65215276	+	0	NA	intron (NM_001111145, intron 1 of 6)	intron (NM_001111145, intron 1 of 6)	5794	NM_001111145	208080	Mm.291862	NM_001111145	ENSMUSG00000086228	Ubap1l	Gm514	ubiquitin-associated protein 1-like	protein-coding
common_peak1-11160-88-80-0.675562406285908-2.81899688018437	chr15	75908909	75910487	+	0	NA	intron (NM_028364, intron 1 of 11)	intron (NM_028364, intron 1 of 11)	1602	NM_001164600	67959	Mm.29965	NM_028364	ENSMUSG00000002524	Puf60	2410104I19Rik|2810454F19Rik|SIAHBP1	poly-U binding splicing factor 60	protein-coding
common_peak2-26243-43-66--0.283526004934069-0.518477330661964	chr2	29619589	29620647	+	0	NA	TTS (NM_001177392)	TTS (NM_001177392)	3070	NM_001177392	433416	Mm.330112	NM_001034887	ENSMUSG00000075425	Gm13547	OTTMUSG00000012686	predicted gene 13547	protein-coding
common_peak1-8720-9-7-0.18961340640422-1.05908390183068	chr11	104316651	104317234	+	0	NA	Intergenic	Intergenic	-13337	NM_001081045	76719	Mm.136418	NM_001081045	ENSMUSG00000018412	Kansl1	1700081L11Rik|9430041J06Rik|mKIAA1267	KAT8 regulatory NSL complex subunit 1	protein-coding
common_peak2-20874-33-38-0.0459353436632801-0.312166972154323	chr11	102317966	102318985	+	0	NA	intron (NM_010575, intron 25 of 29)	intron (NM_010575, intron 25 of 29)	-9498	NM_199200	217219	Mm.259924	NM_199200	ENSMUSG00000034685	Fam171a2	-	family with sequence similarity 171, member A2	protein-coding
common_peak2-31388-75-169--0.670323944394417-3.35131944095102	chr8	86745157	86746543	+	0	NA	intron (NM_172503, intron 10 of 13)	B1_Mus1|SINE|Alu	-13044	NR_037294	100526528		NR_037294		Mir3074-2	mmu-mir-3074-2	microRNA 3074-2	ncRNA
unique_peak2-33156-4-5--0.608423014574403-0.909929411522249	chr10	89486347	89486766	+	0	NA	intron (NM_001128086, intron 1 of 24)	intron (NM_001128086, intron 1 of 24)	150302	NM_001128086	77531	Mm.440605	NM_181398	ENSMUSG00000058589	Anks1b	AIDA-1b|C030032C09Rik|E530015N03Rik|ENSMUSG00000078431|Gm10937|Gm1555	ankyrin repeat and sterile alpha motif domain containing 1B	protein-coding
common_peak2-27622-11-16--0.578769256998726-0.503257505534083	chr3	105053105	105053784	+	0	NA	Intergenic	L1Md_F2|LINE|L1	183682	NM_029228	75269	Mm.307994	NM_029228	ENSMUSG00000051788	4930564D02Rik	-	RIKEN cDNA 4930564D02 gene	protein-coding
common_peak1-19471-15-26--0.742722751607812-0.823046386575433	chrX	129749968	129750718	+	0	NA	Intergenic	Intergenic	473189	NM_001105245	279653	Mm.39738	NM_001105245	ENSMUSG00000051323	Pcdh19	B530002L05Rik|Gm717|mKIAA1313	protocadherin 19	protein-coding
unique_peak1-5246-15-0-4.01216475055566-5.11750992628768	chr5	52470931	52471676	+	0	NA	Intergenic	T-rich|Low_complexity|Low_complexity	55953	NR_105845	102466648		NR_105845	miRBase:MI0021955	Mir6417	mmu-mir-6417	microRNA mir-6417	ncRNA
unique_peak1-247-9-3-1.18961340640422-1.57096726280955	chr1	91057532	91058053	+	0	NA	Intergenic	L1Md_T|LINE|L1	32335	NR_106129	102465771		NR_106129		Mir7669	mmu-mir-7669	microRNA mir-7669	ncRNA
unique_peak2-32962-3-17--2.58390809140159-2.65002542325363	chr10	44268319	44268977	+	0	NA	Intergenic	Intergenic	-90155	NM_007548	12142	Mm.4800	NM_007548	ENSMUSG00000038151	Prdm1	Blimp-1|Blimp1|PRDI-BF1|ZNFPR1A1|b2b1765Clo	PR domain containing 1, with ZNF domain	protein-coding
common_peak2-23468-12-12--0.0516637330534535-0.309718203022949	chr15	73148936	73149512	+	0	NA	intron (NM_007982, intron 7 of 31)	intron (NM_007982, intron 7 of 31)	104397	NM_007982	14083	Mm.254494	NM_007982	ENSMUSG00000022607	Ptk2	FAK|FRNK|Fadk|mKIAA4203|p125FAK	PTK2 protein tyrosine kinase 2	protein-coding
common_peak2-27496-9-6-0.382258484346616-1.11707584880836	chr3	94953616	94953984	+	0	NA	Intergenic	B1_Mur4|SINE|Alu	-7518	NM_027206	69769	Mm.34368	NM_027206	ENSMUSG00000013707	Tnfaip8l2	1810019A08Rik|AW610835|TIPE2	tumor necrosis factor, alpha-induced protein 8-like 2	protein-coding
common_peak1-7749-17-39--1.10363175668232-1.82978420966174	chr1	90998263	90999098	+	0	NA	intron (NM_133816, intron 1 of 5)	RLTRETN_Mm|LTR|ERVK	31643	NM_133816	98402	Mm.170983	NM_133816		Sh3bp4	AI594717|AW227605|BOG25	SH3-domain binding protein 4	protein-coding
common_peak1-17077-10-7-0.356415345008769-1.12966497611638	chr6	108541655	108542162	+	0	NA	intron (NR_104577, intron 3 of 6)	ID_B1|SINE|B4	31253	NR_040757	75394	Mm.395061	NR_040757	ENSMUSG00000087341	0610040F04Rik	-	RIKEN cDNA 0610040F04 gene	ncRNA
common_peak2-21515-7-9--0.522837264589173-1.05908390183068	chr11	94342741	94343110	+	0	NA	intron (NM_144827, intron 13 of 15)	intron (NM_144827, intron 13 of 15)	3699	NM_144827	217116	Mm.156123	NM_144827	ENSMUSG00000020867	Spata20	Tisp78	spermatogenesis associated 20	protein-coding
common_peak1-17349-12-11-0.0638134843664826-0.337263207250336	chr7	4865341	4866122	+	0	NA	Intergenic	RMER6C|LTR|ERVK	-1088	NM_170759	232816	Mm.27442	NM_170759	ENSMUSG00000074406	Zfp628	Zec|Znf628	zinc finger protein 628	protein-coding
common_peak1-15245-26-29-0.0210084965499435-0.304710633611964	chr4	11155616	11156327	+	0	NA	intron (NM_001159595, intron 13 of 26)	intron (NM_001159595, intron 13 of 26)	25435	NM_178112	72656	Mm.246713	NM_178112	ENSMUSG00000040738	Ints8	2810013E07Rik|AV063769|D130008D20Rik	integrator complex subunit 8	protein-coding
unique_peak2-38885-0-5--3.42509343119537-1.32905871926422	chr8	4236022	4236372	+	0	NA	3' UTR (NM_028175, exon 3 of 3)	3' UTR (NM_028175, exon 3 of 3)	-2543	NM_011944	26400	Mm.3906	NM_011944	ENSMUSG00000002948	Map2k7	5930412N11Rik|JNKK 2|Jnkk2|MAPKK 7|MEK 7|Mapkk7|Mek7|Mkk7|Prkmk7|sek2	mitogen-activated protein kinase kinase 7	protein-coding
common_peak1-8855-29-33-0.0248272393647717-0.313805205020552	chr11	31870082	31870900	+	0	NA	intron (NM_026262, intron 1 of 4)	intron (NM_026262, intron 1 of 4)	4858	NM_026262	67592	Mm.78654	NM_026262	ENSMUSG00000020299	4930524B15Rik	-	RIKEN cDNA 4930524B15 gene	protein-coding
unique_peak2-36730-6-7--0.434601889619698-0.97990265578305	chr3	57203206	57203657	+	0	NA	Intergenic	MTE2b|LTR|MaLR	-25901	NM_145539	229302	Mm.26618	NM_145539	ENSMUSG00000027801	Tm4sf4	Iltmp	transmembrane 4 superfamily member 4	protein-coding
unique_peak2-36980-4-20--2.41577793663201-2.82951996911245	chr3	116966644	116967394	+	0	NA	Intergenic	Intergenic	96775	NM_177664	229791	Mm.140138	NM_177664	ENSMUSG00000044667	Lppr4	A330086D10|D3Bwg0562e|PRG-1|mKIAA0455	lipid phosphate phosphatase-related protein type 4	protein-coding
common_peak2-26193-11-16--0.578769256998726-0.503257505534083	chr2	25286101	25286835	+	0	NA	intron (NM_007379, intron 1 of 47)	intron (NM_007379, intron 1 of 47)	2274	NM_007379	11305	Mm.2210	NM_007379	ENSMUSG00000026944	Abca2	AI413825|Abc2|D2H0S1474E|mKIAA1062	ATP-binding cassette, sub-family A (ABC1), member 2	protein-coding
common_peak1-8094-39-71--0.554163754523159-1.18183063007831	chr1	180941503	180942922	+	0	NA	intron (NM_027188, intron 10 of 11)	intron (NM_027188, intron 10 of 11)	482956	NM_001161665	269152	Mm.129727	NM_177724	ENSMUSG00000026494	Kif26b	4832420M10|BC056349|D230039L06Rik	kinesin family member 26B	protein-coding
common_peak2-24676-34-63--0.617931472998734-1.219227950326	chr17	40879785	40880865	+	0	NA	Intergenic	L1VL4|LINE|L1	16256	NM_001038500	619517	Mm.391018	NM_001038500	ENSMUSG00000073396	Esp1	EG619517|Gm6084	exocrine gland secreted peptide 1	protein-coding
common_peak1-14487-11-23--1.07626891646954-1.24082643394777	chr3	7366065	7366679	+	0	NA	promoter-TSS (NM_008862)	promoter-TSS (NM_008862)	-232	NM_008862	18767	Mm.3193	NM_008862	ENSMUSG00000027499	Pkia	AI415001|PKIalpha	protein kinase inhibitor, alpha	protein-coding
common_peak2-32028-23-83--1.67054991826968-7.1065999619654	chr9	76014422	76015624	+	0	NA	intron (NM_205844, intron 7 of 8)	RMER17C|LTR|ERVK	46441	NM_205844	404194	Mm.213862	NM_205844	ENSMUSG00000059383	Gfral	AY457637|Gral	GDNF family receptor alpha like	protein-coding
unique_peak1-3718-18-4-1.99099105634099-2.82951996911245	chr19	45920424	45921406	+	0	NA	intron (NM_198296, intron 23 of 25)	MTD|LTR|MaLR	-30362	NM_145703	80906	Mm.213204	NM_030716	ENSMUSG00000025221	Kcnip2	KChIP2	Kv channel-interacting protein 2	protein-coding
common_peak2-27685-12-14--0.25811461052088-0.309074325783021	chr3	117074794	117075387	+	0	NA	Intergenic	RMER12|LTR|ERVK	-11296	NM_177664	229791	Mm.140138	NM_177664	ENSMUSG00000044667	Lppr4	A330086D10|D3Bwg0562e|PRG-1|mKIAA0455	lipid phosphate phosphatase-related protein type 4	protein-coding
unique_peak1-1658-7-0-2.79909083029819-2.40823996531185	chr13	63094805	63095277	+	0	NA	intron (NM_001289926, intron 1 of 15)	intron (NM_001289926, intron 1 of 15)	28788	NM_001289924	72061	Mm.188105	NM_028079	ENSMUSG00000021458	2010111I01Rik	2300006M17Rik|AP-O|Aopep	RIKEN cDNA 2010111I01 gene	protein-coding
unique_peak2-38317-6-6--0.241956811677302-0.947717972411649	chr6	145769053	145769478	+	0	NA	Intergenic	Intergenic	12362	NM_027760	71323	Mm.158669	NM_027760	ENSMUSG00000030259	Rassf8	5133400D11Rik|AA815821|AW123240|Hoj1|mHoj-1	Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	protein-coding
common_peak2-24565-8-19--1.31670567693979-1.30305656033811	chr17	29347287	29347946	+	0	NA	intron (NM_153166, intron 4 of 20)	intron (NM_153166, intron 4 of 20)	27119	NM_153166	240058	Mm.39905	NM_153166	ENSMUSG00000024008	Cpne5	A830083G22Rik	copine V	protein-coding
unique_peak1-2086-16-6-1.31090872021046-1.49151883326344	chr15	36914381	36915123	+	0	NA	Intergenic	Intergenic	22405	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
common_peak1-11026-63-101--0.234112750900906-0.52762724878729	chr15	39005724	39006962	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-23489	NM_001256382	116838	Mm.309296	NM_053271		Rims2	2810036I15Rik|AW048769|RIM2|Rab3ip2|Rim2(+40A)|Rim2(+44A)|Rim2(+4A)|Serg2|Syt3-rs|mKIAA0751	regulating synaptic membrane exocytosis 2	protein-coding
unique_peak2-37140-3-7--1.41398308995928-1.23214870625617	chr4	28424634	28424960	+	0	NA	Intergenic	Intergenic	-315484	NM_001290434	13841	Mm.257266	NM_010141	ENSMUSG00000028289	Epha7	Cek11|Ebk|Ehk3|Hek11|Mdk1	Eph receptor A7	protein-coding
unique_peak1-5533-9-0-3.18961340640422-3.01029995663981	chr5	140029635	140030142	+	0	NA	Intergenic	Intergenic	10036	NM_013702	22255	Mm.42190	NM_013702	ENSMUSG00000029546	Uncx	Chx4|Uncx4.1	UNC homeobox	protein-coding
common_peak1-13801-29-31-0.112290080615111-0.353704024845522	chr2	44927108	44928009	+	0	NA	intron (NM_001289521, intron 1 of 8)	intron (NM_001289521, intron 1 of 8)	38239	NM_001289521	24136	Mm.440702	NM_015753	ENSMUSG00000026872	Zeb2	9130203F04Rik|D130016B08Rik|SIP1|Zfhx1b|Zfx1b|Zfxh1b	zinc finger E-box binding homeobox 2	protein-coding
common_peak1-14673-45-30-0.906161714957997-2.2696557331197	chr3	61339944	61341260	+	0	NA	Intergenic	MER21B|LTR|ERV1	172173	NM_028712	74012	Mm.422674	NM_028712	ENSMUSG00000036894	Rap2b	4021402C18Rik|AA408554	RAP2B, member of RAS oncogene family	protein-coding
common_peak2-29047-19-17-0.232762325219374-0.392630012299441	chr5	115327108	115327782	+	0	NA	intron (NM_026263, intron 9 of 11)	intron (NM_026263, intron 9 of 11)	-19498	NM_011854	23962	Mm.228363	NM_011854	ENSMUSG00000029561	Oasl2	M1204|Mmu-OASL|Oasl	2'-5' oligoadenylate synthetase-like 2	protein-coding
common_peak1-13927-52-31-1.1082599902657-3.51682933179518	chr2	84742663	84744000	+	0	NA	Intergenic	RLTR6-int|LTR|ERV1	-16482	NM_199223	269295	Mm.86447	NM_199223	ENSMUSG00000050896	Rtn4rl2	Ngr2|Ngrh1|Ngrl3	reticulon 4 receptor-like 2	protein-coding
common_peak2-21639-14-16--0.188246680892695-0.308035960714963	chr11	101552827	101553496	+	0	NA	Intergenic	RMER17C|LTR|ERVK	26306	NM_025404	80981	Mm.266840	NM_025404	ENSMUSG00000034936	Arl4d	1110036H21Rik|ARL6|AW456149|Arf4l|Arfl4|Arl5	ADP-ribosylation factor-like 4D	protein-coding
unique_peak2-37579-2-8--2.08737925770563-1.65811743852845	chr5	36176624	36176996	+	0	NA	intron (NM_001177700, intron 9 of 16)	intron (NM_001177700, intron 9 of 16)	-59158	NM_027373	70292	Mm.125167	NM_027373	ENSMUSG00000029094	Afap1	2600003E23Rik|9630044L16Rik|AI848729|Afap|mKIAA3018	actin filament associated protein 1	protein-coding
common_peak2-20572-9-6-0.382258484346616-1.11707584880836	chr10	76468549	76468794	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	-6069	NR_045882	100038479	Mm.387034	NR_045882	ENSMUSG00000074919	Gm10787	ENSMUSG00000074919	predicted gene 10787	ncRNA
common_peak1-12372-9-5-0.604650905683064-1.21398586181642	chr17	65658540	65659163	+	0	NA	intron (NM_001289485, intron 14 of 15)	L1_Mus1|LINE|L1	231271	NM_001008973	381107	Mm.141275	NM_001008973	ENSMUSG00000045036	Tmem232	E130009J12Rik|Gm940|Tes13-L|Tes13-S	transmembrane protein 232	protein-coding
common_peak2-28612-7-6--0.00826409175941478-0.97990265578305	chr5	24452639	24453076	+	0	NA	intron (NM_145401, intron 4 of 15)	CT-rich|Low_complexity|Low_complexity	-38530	NM_001170556	108099	Mm.33649	NM_145401	ENSMUSG00000028944	Prkag2	2410051C13Rik|AAKG|AAKG2|AI854673|H91620p|WPWS	protein kinase, AMP-activated, gamma 2 non-catalytic subunit	protein-coding
common_peak1-8085-92-151--0.155575429740821-0.471344968188905	chr1	179958975	179960799	+	0	NA	intron (NM_001034899, intron 5 of 7)	MLT1A0|LTR|MaLR	38321	NM_001034899	545391	Mm.442974	NM_001034899	ENSMUSG00000091476	Gm16432	EG545391|EG666250	predicted gene 16432	protein-coding
unique_peak1-1116-6-3-0.565398110380302-1.08602067057793	chr11	94392593	94393106	+	0	NA	Intergenic	Intergenic	-10033	NM_170671	104601	Mm.84725	NM_170671	ENSMUSG00000039110	Mycbpap	4932408B01Rik|AMAP-1|AW125474	MYCBP associated protein	protein-coding
common_peak2-21890-9-14--0.717277189204299-0.53895475198017	chr12	3310235	3310957	+	0	NA	promoter-TSS (NM_016676)	promoter-TSS (NM_016676)	-627	NM_016676	19325	Mm.378993	NM_016676	ENSMUSG00000020671	Rab10	AW107754	RAB10, member RAS oncogene family	protein-coding
common_peak2-19720-14-12-0.198776442216552-0.373562084705529	chr1	69685681	69686086	+	0	NA	intron (NM_011770, intron 3 of 7)	MTD|LTR|MaLR	46651	NM_011770	22779	Mm.106343	NM_011770	ENSMUSG00000025997	Ikzf2	A730095J18Rik|Helios|Zfpn1a2|Znfn1a2	IKAROS family zinc finger 2	protein-coding
unique_peak2-36400-3-9--1.73591118484664-1.57096726280955	chr2	124912399	124912746	+	0	NA	TTS (NM_010852)	TTS (NM_010852)	18709	NM_175034	317750	Mm.330538	NM_175034	ENSMUSG00000035183	Slc24a5	F630045L20Rik|JSX|NCKX5|NCX5|Oca6	solute carrier family 24, member 5	protein-coding
unique_peak2-39587-3-8--1.58390809140159-1.39487600375387	chr9	76013365	76013648	+	0	NA	intron (NM_205844, intron 8 of 8)	intron (NM_205844, intron 8 of 8)	47958	NM_205844	404194	Mm.213862	NM_205844	ENSMUSG00000059383	Gfral	AY457637|Gral	GDNF family receptor alpha like	protein-coding
unique_peak1-4922-12-3-1.64877598508764-2.36932189928148	chr4	57239585	57240174	+	0	NA	intron (NM_011207, intron 14 of 25)	B1_Mur2|SINE|Alu	54936	NR_040669	329851	Mm.392470	NR_040669	ENSMUSG00000085967	Gm12530	D730003B17|OTTMUSG00000007337	predicted gene 12530	ncRNA
unique_peak2-33596-7-9--0.522837264589173-1.05908390183068	chr11	88864661	88865290	+	0	NA	intron (NM_009546, intron 1 of 8)	intron (NM_009546, intron 1 of 8)	4258	NM_009546	217069	Mm.248445	NM_009546	ENSMUSG00000000275	Trim25	AA960166|AL022677|EFP|Zfp147	tripartite motif-containing 25	protein-coding
unique_peak2-32571-3-7--1.41398308995928-1.23214870625617	chr1	86440371	86440820	+	0	NA	Intergenic	Intergenic	1054790	NM_030194	109032	Mm.335802	NM_030194	ENSMUSG00000070034	Sp110	5031415C07Rik|52kDa|5830484A20Rik|ENSMUSG00000075603|Ifi75|Ipr1	Sp110 nuclear body protein	protein-coding
common_peak2-31308-69-119--0.311748148349786-0.788445440019706	chr8	78508123	78509962	+	0	NA	TTS (NM_027944)	TTS (NM_027944)	536449	NM_001164235	71831	Mm.443238	NM_027944	ENSMUSG00000031620	1700007B14Rik	-	RIKEN cDNA 1700007B14 gene	protein-coding
unique_peak1-1441-36-9-2.15739299128039-5.99013243592305	chr12	100281904	100283200	+	0	NA	Intergenic	Intergenic	118466	NR_038130	67639	Mm.87374	NR_038130		4930474N09Rik	-	RIKEN cDNA 4930474N09 gene	ncRNA
unique_peak2-33775-9-11--0.395349094316936-0.344532117358383	chr11	118416380	118416977	+	0	NA	intron (NM_001285436, intron 3 of 13)	intron (NM_001285436, intron 3 of 13)	78404	NM_172573	217364	Mm.473963	NM_172573	ENSMUSG00000033857	Engase	C130099A03|D230014K01Rik	endo-beta-N-acetylglucosaminidase	protein-coding
unique_peak1-7036-13-3-1.77847203063777-2.58603100924543	chr8	126851001	126851627	+	0	NA	intron (NM_139272, intron 6 of 15)	intron (NM_139272, intron 6 of 15)	96020	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
common_peak2-31818-3-4--0.73591118484664-0.864171920961574	chr9	41581147	41581577	+	0	NA	Intergenic	Intergenic	191353	NR_029822	387236		NR_029822	miRBase:MI0000725	Mir125b-1	Mirn125b|Mirn125b-1	microRNA 125b-1	ncRNA
unique_peak1-2615-9-4-0.867685311516858-1.36011389749466	chr16	34861620	34862073	+	0	NA	intron (NM_139300, intron 3 of 31)	intron (NM_139300, intron 3 of 31)	76810	NM_139300	107589	Mm.33360	NM_139300	ENSMUSG00000022836	Mylk	9530072E15Rik|A930019C19Rik|AW489456|KRP|MLCK108|MLCK210|Mlck|smMLCK	myosin, light polypeptide kinase	protein-coding
common_peak2-27109-15-10-0.552733131918359-0.604422558181019	chr3	9752022	9752713	+	0	NA	intron (NM_001195031, intron 3 of 8)	intron (NM_001195031, intron 3 of 8)	81312	NM_053182	94212	Mm.23897	NM_053182	ENSMUSG00000027508	Pag1	Cbp|F730007C19Rik|Pag	phosphoprotein associated with glycosphingolipid microdomains 1	protein-coding
common_peak2-29410-20-12-0.787635066450101-0.949240599462708	chr6	135167774	135168173	+	0	NA	intron (NM_028982, intron 4 of 12)	ID_B1|SINE|B4	19968	NM_028982	74525	Mm.34182	NM_028982	ENSMUSG00000030207	8430419L09Rik	Kiaa1467|mKIAA1467	RIKEN cDNA 8430419L09 gene	protein-coding
unique_peak1-5491-12-2-2.06381348436648-2.79529063155376	chr5	134251167	134251902	+	0	NA	Intergenic	Intergenic	-324084	NM_030719	80909	Mm.45218	NM_030719		Gatsl2	7530428J21Rik|AW742413|Gats|Gatsl1	GATS protein-like 2	protein-coding
common_peak1-18387-20-34--0.641208232353773-0.863762398024911	chr8	70906126	70906834	+	0	NA	intron (NM_172753, intron 6 of 9)	(CATATA)n|Simple_repeat|Simple_repeat	14122	NR_038181	73609	Mm.443247	NR_038181	ENSMUSG00000085197	1700125H03Rik	4930510D22Rik	RIKEN cDNA 1700125H03 gene	ncRNA
unique_peak2-38398-6-10--0.894033508256995-1.21398586181642	chr7	19609866	19610331	+	0	NA	intron (NM_026605, intron 1 of 26)	intron (NM_026605, intron 1 of 26)	372	NM_026605	68188	Mm.130902	NM_026605	ENSMUSG00000023118	Sympk	1500016F02Rik|4632415H16Rik|AA125406|AI449890|SPK|SYM	symplekin	protein-coding
common_peak1-9674-33-70--0.818409556979153-2.10039660541362	chr12	8499071	8500162	+	0	NA	Intergenic	Intergenic	7175	NM_007483	11852	Mm.687	NM_007483	ENSMUSG00000054364	Rhob	AA017882|Arh6|Arhb	ras homolog gene family, member B	protein-coding
unique_peak2-38538-13-35--1.39145297080454-2.32006591355687	chr7	47007923	47009009	+	0	NA	Intergenic	Intergenic	235330	NM_001004139	70227	Mm.333800	NM_001004139	ENSMUSG00000068959	Zfp619	3000002G13Rik	zinc finger protein 619	protein-coding
common_peak1-10037-10-16--0.73104749624157-0.604422558181019	chr13	14613206	14613702	+	0	NA	intron (NM_001081348, intron 1 of 28)	intron (NM_001081348, intron 1 of 28)	2039	NM_001081348	94253	Mm.125298	NM_153130	ENSMUSG00000021301	Hecw1	9330116H24Rik|AV273951|E130207I19Rik|Nedl1	HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	protein-coding
common_peak2-29551-9-6-0.382258484346616-1.11707584880836	chr6	41522652	41523062	+	0	NA	Intergenic	B3A|SINE|B2	-32624	NM_001146351	13848	Mm.271976	NM_007680	ENSMUSG00000029869	Ephb6	Cekl|Mep	Eph receptor B6	protein-coding
unique_peak2-33270-6-5--0.0195643903408542-0.947717972411649	chr10	128705227	128705651	+	0	NA	TTS (NM_146544)	TTS (NM_146544)	938	NM_146544	258537	Mm.271447	NM_146544	ENSMUSG00000062914	Olfr777	MOR114-9	olfactory receptor 777	protein-coding
common_peak1-17174-14-4-1.57728806547028-2.4322161449009	chr6	120927419	120928066	+	0	NA	intron (NM_001270475, intron 20 of 31)	intron (NM_001270475, intron 20 of 31)	-60904	NM_007544	12122	Mm.235081	NM_007544	ENSMUSG00000004446	Bid	2700049M22Rik|AI875481|AU022477	BH3 interacting domain death agonist	protein-coding
common_peak2-24827-33-54--0.450022150999131-0.755494033265326	chr17	71615653	71617055	+	0	NA	intron (NM_145158, intron 4 of 7)	(TA)n|Simple_repeat|Simple_repeat	43951	NM_145158	246707	Mm.23462	NM_145158	ENSMUSG00000024053	Emilin2	FOAP-10	elastin microfibril interfacer 2	protein-coding
common_peak2-27871-8-13--0.802132504110034-0.562038191119711	chr3	159841561	159842040	+	0	NA	Intergenic	Intergenic	339141	NM_026582	68151	Mm.6766	NM_026582		Wls	5031439A09Rik|AI173978|AI987742|Gpr177	wntless homolog (Drosophila)	protein-coding
common_peak2-27901-15-17--0.157760250886656-0.307611222530528	chr4	155172790	155173363	+	0	NA	Intergenic	RLTR22_Mur|LTR|ERVK	-4651	NM_025570	66448	Mm.23825	NM_025570	ENSMUSG00000029066	Mrpl20	2610008D01Rik|4930425I20Rik	mitochondrial ribosomal protein L20	protein-coding
common_peak1-8887-8-14--0.901668177660948-0.660903317613906	chr11	48820182	48820706	+	0	NA	Intergenic	Intergenic	-14688	NM_001145164	100039796	Mm.482363	NM_001145164	ENSMUSG00000078921	Tgtp2	OTTMUSG00000005537	T cell specific GTPase 2	protein-coding
common_peak2-23201-17-24--0.425559851569687-0.427564438475253	chr15	88751620	88752394	+	0	NA	intron (NM_172818, intron 8 of 11)	intron (NM_172818, intron 8 of 11)	32841	NM_172818	239591	Mm.86807	NM_172818	ENSMUSG00000022388	Ttll8	1700019P01Rik|4933401B17	tubulin tyrosine ligase-like family, member 8	protein-coding
unique_peak1-6789-20-1-3.48807478459119-5.43827864561946	chr8	69027645	69028581	+	0	NA	Intergenic	RMER19B|LTR|ERVK	-7526	NM_001271574	74419	Mm.159193	NM_028927	ENSMUSG00000025519	Tktl2	4933401I19Rik	transketolase-like 2	protein-coding
common_peak2-25875-45-64--0.162009787683583-0.365132085969548	chr19	43929683	43931357	+	0	NA	intron (NM_028029, intron 11 of 15)	intron (NM_028029, intron 11 of 15)	17227	NR_033472	100038628	Mm.212585	NR_033472	ENSMUSG00000074828	Gm10768	ENSMUSG00000074828	predicted gene 10768	ncRNA
common_peak2-30278-23-27--0.0855874175485232-0.30512735654709	chr7	16405766	16406790	+	0	NA	Intergenic	L1_Mur1|LINE|L1	18750	NM_145710	252830	Mm.25863	NM_145710	ENSMUSG00000041583	Obox6	D17Ertd599e	oocyte specific homeobox 6	protein-coding
common_peak2-32136-35-47--0.153592242258652-0.339646668784	chr9	106788186	106789384	+	0	NA	TTS (NM_029103)	TTS (NM_029103)	546	NM_175402	109095	Mm.431589	NM_175402	ENSMUSG00000045365	Rbm15b	1810017N16Rik	RNA binding motif protein 15B	protein-coding
unique_peak2-33572-3-11--1.99894559068043-1.95434855131066	chr11	85491964	85492549	+	0	NA	intron (NM_001166643, intron 22 of 23)	intron (NM_001166643, intron 22 of 23)	40990	NR_045875	71489	Mm.442482	NR_045875	ENSMUSG00000086199	Bcas3os1	8430403D17Rik	breast carcinoma amplified sequence 3, opposite strand 1	ncRNA
common_peak2-26589-58-79--0.0259781599968658-0.301029995664001	chr2	109677027	109678073	+	0	NA	Intergenic	Intergenic	-53485	NM_011699	22343	Mm.235300	NM_011699	ENSMUSG00000027162	Lin7c	9130007B12Rik|AI303698|AU019331|AW125731|D2Ertd520e|LIN-7-C|LIN-7C|MALS-3|Veli3	lin-7 homolog C (C. elegans)	protein-coding
unique_peak2-38606-5-8--0.874305337448166-1.10484139239135	chr7	79832960	79833549	+	0	NA	Intergenic	RMER17D|LTR|ERVK	-381773	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding
common_peak2-22421-36-40-0.121769081549671-0.36493371439645	chr13	36733755	36735352	+	0	NA	Intergenic	Intergenic	91793	NM_153529	68404	Mm.232930	NM_153529	ENSMUSG00000039114	Nrn1	0710008J23Rik|Cpg15|Nrn	neuritin 1	protein-coding
unique_peak1-1748-8-3-1.00522241794757-1.39487600375387	chr13	107168775	107169301	+	0	NA	Intergenic	L1Md_A|LINE|L1	557957	NM_029665	76582	Mm.132208	NM_029665	ENSMUSG00000042590	Ipo11	1700081H05Rik|2510001A17Rik|AI314624|AW555235|E330021B14Rik|Ranbp11	importin 11	protein-coding
unique_peak1-4157-10-3-1.35641534500877-1.75805390616669	chr2	102745438	102745948	+	0	NA	Intergenic	Intergenic	-3871	NM_001039150	12505	Mm.423621	NM_009851	ENSMUSG00000005087	Cd44	AU023126|AW121933|AW146109|HERMES|Ly-24|Pgp-1	CD44 antigen	protein-coding
common_peak1-12838-19-25--0.297752391479405-0.376654945067947	chr18	70529492	70530393	+	0	NA	Intergenic	MTD|LTR|MaLR	-102166	NM_029019	170461	Mm.83623	NM_029019	ENSMUSG00000079608	Stard6	1700011K09Rik|4833424I06Rik|4933429L05Rik|AI644424	StAR-related lipid transfer (START) domain containing 6	protein-coding
unique_peak2-37106-20-62--1.48920513890872-4.60967332922062	chr4	120569008	120570964	+	0	NA	Intergenic	B3A|SINE|B2	19512	NM_182929	242662	Mm.192502	NM_182929	ENSMUSG00000032890	Rims3	A730060M23Rik|Nim3|Rim3|mKIAA0237	regulating synaptic membrane exocytosis 3	protein-coding
unique_peak2-36900-7-23--1.78587167042297-2.25371873249797	chr3	96244952	96245395	+	0	NA	intron (NM_001256180, intron 2 of 4)	BGLII_B|LTR|ERVK	11056	NM_001256181	329716	Mm.275223	NM_183223	ENSMUSG00000046317	BC107364	D730018G16	cDNA sequence BC107364	protein-coding
common_peak2-28498-34-43--0.0773630916360313-0.30358472802154	chr5	122158325	122159176	+	0	NA	Intergenic	RSINE1|SINE|B4	-2868	NM_009125	20239	Mm.260900	NM_009125	ENSMUSG00000042605	Atxn2	9630045M23Rik|ATX2|AW544490|Sca2	ataxin 2	protein-coding
unique_peak1-1526-19-6-1.59533240460408-2.21753093801298	chr13	13549874	13550761	+	0	NA	intron (NM_010917, intron 1 of 19)	L1M3|LINE|L1	20448	NM_010917	18073	Mm.4691	NM_010917	ENSMUSG00000005397	Nid1	A630025O17|Nid|entactin|entactin-1|nidogen-1	nidogen 1	protein-coding
common_peak2-26612-9-6-0.382258484346616-1.11707584880836	chr2	116972823	116973094	+	0	NA	intron (NM_001277256, intron 1 of 4)	intron (NM_001277256, intron 1 of 4)	26151	NM_033524	114715	Mm.245890	NM_033524	ENSMUSG00000027351	Spred1	5730461F13Rik|AL024345|AW047647	sprouty protein with EVH-1 domain 1, related sequence	protein-coding
common_peak2-22451-10-6-0.549060422951165-1.21398586181642	chr13	42108234	42108578	+	0	NA	Intergenic	Intergenic	-38984	NM_007772	110521	Mm.4808	NM_007772	ENSMUSG00000021366	Hivep1	Cryabp1	human immunodeficiency virus type I enhancer binding protein 1	protein-coding
common_peak1-11257-60-60-0.423554524057645-1.04415539603865	chr15	80173153	80174808	+	0	NA	intron (NM_001044308, intron 5 of 36)	intron (NM_001044308, intron 5 of 36)	56312	NM_001044308	239556	Mm.291058	NM_001044308	ENSMUSG00000022416	Cacna1i	Ca(V)3.3	calcium channel, voltage-dependent, alpha 1I subunit	protein-coding
common_peak1-17365-20-13-0.680719862533589-0.809260849721102	chr7	49331594	49332631	+	0	NA	Intergenic	Lx7|LINE|L1	-17761	NM_001105056	628444	Mm.469901	NM_001105056	ENSMUSG00000092032	Vmn2r59	EG628444	vomeronasal 2, receptor 59	protein-coding
unique_peak1-7140-17-7-1.21829633820504-1.55050753388977	chr9	56509002	56509819	+	0	NA	intron (NM_181074, intron 2 of 3)	intron (NM_181074, intron 2 of 3)	23650	NM_181074	235402	Mm.246605	NM_181074	ENSMUSG00000049556	Lingo1	4930471K13Rik|AV148400|LERN1|LINGO-1|Lrrn6a|UNQ201	leucine rich repeat and Ig domain containing 1	protein-coding
common_peak2-30238-26-19-0.6059709972711-0.841847921495509	chr7	4792930	4793480	+	0	NA	intron (NM_001290291, intron 1 of 4)	intron (NM_001290291, intron 1 of 4)	3093	NM_001290291	232813	Mm.44666	NM_172737	ENSMUSG00000053550	Shisa7	-	shisa homolog 7 (Xenopus laevis)	protein-coding
common_peak2-21718-64-85-0.0391816470065054-0.312327239180854	chr11	109650608	109651833	+	0	NA	intron (NM_001162428, intron 5 of 5)	RLTR28B|LTR|ERVL	38140	NM_027038	69324	Mm.31700	NM_027038	ENSMUSG00000020617	1700012B07Rik	1700069D21Rik	RIKEN cDNA 1700012B07 gene	protein-coding
common_peak2-24203-20-30--0.466121525795682-0.569352520859861	chr16	64851918	64853011	+	0	NA	intron (NM_178647, intron 1 of 2)	CpG	553	NM_178647	106143	Mm.10160	NM_178647	ENSMUSG00000054604	Cggbp1	AA960172|AL023996|AW045841	CGG triplet repeat binding protein 1	protein-coding
unique_peak1-5810-13-3-1.77847203063777-2.58603100924543	chr6	69251670	69252338	+	0	NA	Intergenic	MLT1D|LTR|MaLR	25164	NR_004434	19783		NR_004434		Rprl1	Rmrp2|Rpr|Rprh2	ribonuclease P RNA-like 1	ncRNA
common_peak2-19985-8-17--1.16470258349474-1.02063122982878	chr1	133950519	133951213	+	0	NA	intron (NM_001114662, intron 3 of 9)	intron (NM_001114662, intron 3 of 9)	13773	NM_172510	213006	Mm.208445	NM_172510	ENSMUSG00000059149	Mfsd4	A230072B04|A930031D07Rik|AI850289	major facilitator superfamily domain containing 4	protein-coding
unique_peak2-33548-6-6--0.241956811677302-0.947717972411649	chr11	79704793	79705119	+	0	NA	Intergenic	Intergenic	70933	NM_144826	216987	Mm.274961	NM_144826	ENSMUSG00000035575	Utp6	4732497O03Rik|HCA66	UTP6, small subunit (SSU) processome component, homolog (yeast)	protein-coding
common_peak1-10636-14-16--0.188246680892695-0.308035960714963	chr14	46143892	46144504	+	0	NA	intron (NM_146054, intron 2 of 14)	RSINE1|SINE|B4	5542	NM_146054	218952	Mm.210018	NM_146054	ENSMUSG00000037712	Fermt2	AA960555|Kindlin-2|Mig2|Plekhc1	fermitin family homolog 2 (Drosophila)	protein-coding
unique_peak1-2171-9-1-2.18961340640422-2.31132995230379	chr15	61506449	61506896	+	0	NA	Intergenic	Intergenic	99334	NR_040350	432956	Mm.404918	NR_040350		D030024E09Rik	-	RIKEN cDNA D030024E09 gene	ncRNA
unique_peak1-522-11-0-3.50869358425161-3.61235994796777	chr1	184040940	184041470	+	0	NA	Intergenic	Intergenic	-13663	NM_012058	27058	Mm.303071	NM_012058	ENSMUSG00000026511	Srp9	9kDa	signal recognition particle 9	protein-coding
common_peak1-14955-48-66--0.0951620392229575-0.316181169053401	chr3	104441412	104442459	+	0	NA	promoter-TSS (NM_009196)	promoter-TSS (NM_009196)	-652	NM_009196	20501	Mm.9086	NM_009196	ENSMUSG00000032902	Slc16a1	AL022710|Mct1	solute carrier family 16 (monocarboxylic acid transporters), member 1	protein-coding
common_peak1-17589-11-15--0.491306415748387-0.435191258261915	chr7	43312638	43313093	+	0	NA	Intergenic	Intergenic	3207039	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak2-33592-8-14--0.901668177660948-0.660903317613906	chr11	88203589	88204331	+	0	NA	intron (NM_054043, intron 9 of 13)	MER3|DNA|MER1_type	37685	NR_039545	100628571		NR_039545	miRBase:MI0016973	Mir378b	mmu-mir-378b	microRNA 378b	ncRNA
common_peak1-10182-21-12-0.869049547125143-1.18646456559501	chr13	41366280	41366914	+	0	NA	intron (NM_001135577, intron 1 of 1)	intron (NM_001135577, intron 1 of 1)	21384	NM_001135577	108934	Mm.38578	NM_001135577	ENSMUSG00000091264	Smim13	2900036K02Rik	small integral membrane protein 13	protein-coding
unique_peak1-3134-26-11-1.34293659143731-2.2880788707084	chr18	36384180	36385244	+	0	NA	Intergenic	RMER1B|Other|Other	-27898	NM_001167891	100042150	Mm.380390	NM_001167891	ENSMUSG00000060275	Nrg2	Don1|NTAK	neuregulin 2	protein-coding
unique_peak1-5946-9-0-3.18961340640422-3.01029995663981	chr6	91040937	91041427	+	0	NA	intron (NM_018815, intron 3 of 39)	intron (NM_018815, intron 3 of 39)	25638	NM_018815	54563	Mm.28162	NM_018815	ENSMUSG00000030091	Nup210	9830001L10|AI836801|Pom210|gp190|gp210	nucleoporin 210	protein-coding
common_peak1-7961-55-69-0.0753368542077357-0.339000539072378	chr1	155097703	155099340	+	0	NA	intron (NM_010683, intron 5 of 27)	intron (NM_010683, intron 5 of 27)	-64944	NM_008485	16782	Mm.329272	NM_008485	ENSMUSG00000026479	Lamc2	AA589349	laminin, gamma 2	protein-coding
common_peak2-28020-25-41--0.530467517433655-0.749946955723563	chr4	48042569	48043728	+	0	NA	Intergenic	Intergenic	-20972	NM_015743	18124	Mm.247261	NM_015743	ENSMUSG00000028341	Nr4a3	AI573420|CHN|CSMF|MINOR|NOR-1|Nor1|TEC	nuclear receptor subfamily 4, group A, member 3	protein-coding
common_peak2-21958-25-33--0.225612935905233-0.357106932979091	chr12	33429611	33430410	+	0	NA	Intergenic	Lx5|LINE|L1	-75190	NM_021524	59027	Mm.202727	NM_021524	ENSMUSG00000020572	Nampt	1110035O14Rik|AI314458|AI480535|NAmPRTase|Pbef|Pbef1|Visfatin	nicotinamide phosphoribosyltransferase	protein-coding
common_peak2-27940-17-21--0.24113528043226-0.322753776620787	chr4	25281241	25281806	+	0	NA	Intergenic	Intergenic	-72555	NM_026194	67490	Mm.226295	NM_026194	ENSMUSG00000040359	Ufl1	1810074P20Rik|AI429228|Kiaa0776|Maxer|Rcad|mKIAA0776	UFM1 specific ligase 1	protein-coding
unique_peak1-5049-8-5-0.420259917226415-1.10484139239135	chr4	135102681	135103196	+	0	NA	intron (NM_001013756, intron 14 of 15)	intron (NM_001013756, intron 14 of 15)	26597	NM_001013756	230824	Mm.331972	NM_001013756	ENSMUSG00000037188	Grhl3	AI561912|Get1|Som|Tfcp2l4|ct	grainyhead-like 3 (Drosophila)	protein-coding
common_peak2-28173-18-36--0.896534214400599-1.30767018140165	chr4	109000023	109001225	+	0	NA	intron (NM_007943, intron 11 of 24)	intron (NM_007943, intron 11 of 24)	-15037	NM_001159964	13858	Mm.318250	NM_007943	ENSMUSG00000028552	Eps15	2410112D09Rik	epidermal growth factor receptor pathway substrate 15	protein-coding
unique_peak1-3281-7-0-2.79909083029819-2.40823996531185	chr18	74347816	74348332	+	0	NA	Intergenic	MT2B|LTR|ERVL	19398	NM_001164355	66468	Mm.283406	NM_025581	ENSMUSG00000036223	Ska1	2810433K01Rik|AV117428	spindle and kinetochore associated complex subunit 1	protein-coding
common_peak2-30354-9-8-0.0196884049619079-1.03275496310833	chr7	27929288	27929654	+	0	NA	Intergenic	Lx2|LINE|L1	-9262	NM_001100184	384724	Mm.466612	NM_001100184	ENSMUSG00000078787	Cyp2t4	Gm1448|Gm1450	cytochrome P450, family 2, subfamily t, polypeptide 4	protein-coding
unique_peak2-36711-5-5--0.289342836727009-0.909929411522249	chr3	51738957	51739383	+	0	NA	intron (NM_001004176, intron 1 of 4)	intron (NM_001004176, intron 1 of 4)	169758	NM_001004176	433586	Mm.234972	NM_001004176	ENSMUSG00000061143	Maml3	AV234550|BC049812|Mam-2|mKIAA1816	mastermind like 3 (Drosophila)	protein-coding
unique_peak2-38945-2-6--1.72480917832092-1.26211192963361	chr8	25991231	25991643	+	0	NA	intron (NM_001293693, intron 14 of 19)	intron (NM_001293693, intron 14 of 19)	-56596	NM_001272059	11499	Mm.143889	NM_007401	ENSMUSG00000031554	Adam5	tMDC II|tMDCII	a disintegrin and metallopeptidase domain 5	protein-coding
common_peak1-15393-22-15-0.647284105087405-0.849699271740893	chr4	80907167	80908441	+	0	NA	Intergenic	L1Md_F2|LINE|L1	180905	NM_010820	17475	Mm.153039	NM_010820	ENSMUSG00000028402	Mpdz	AI225843|B930003D11Rik|MUPP1	multiple PDZ domain protein	protein-coding
common_peak2-31563-20-44--1.00377831173848-1.92432670720421	chr8	117256280	117257600	+	0	NA	intron (NM_019573, intron 8 of 8)	intron (NM_019573, intron 8 of 8)	293388	NM_019573	80707	Mm.440420	NM_019573	ENSMUSG00000004637	Wwox	5330426P09Rik|9030416C10Rik|WOX1	WW domain-containing oxidoreductase	protein-coding
common_peak2-23204-302-521-0.131542452451797-0.817960554032255	chr15	96284525	96288951	+	0	NA	intron (NM_028148, intron 1 of 14)	intron (NM_028148, intron 1 of 14)	4536	NM_028148	72193	Mm.324474	NM_028148	ENSMUSG00000033228	Scaf11	1110061H03Rik|2610510E10Rik|AI462454|CASP11|SIP1|SRRP129|Sfrs2ip|Srsf2ip|mKIAA3013	SR-related CTD-associated factor 11	protein-coding
common_peak2-29178-10-7-0.356415345008769-1.12966497611638	chr5	134955601	134955981	+	0	NA	Intergenic	ETnERV2-int|LTR|ERVK	-23205	NM_001081464	57080	Mm.332735	NM_020331	ENSMUSG00000023079	Gtf2ird1	1700012P16Rik|BEN|Cream1|ESTM9|GTF3|Gtf2il|MusTRD1|Tg(Alb1-Myc)166.8Sst|WBSCR11|X83320	general transcription factor II I repeat domain-containing 1	protein-coding
common_peak2-32400-21-19-0.247561170378873-0.427564438475253	chrX	142390529	142391145	+	0	NA	Intergenic	Intergenic	-468655	NM_153319	27494	Mm.100068	NM_153319	ENSMUSG00000041688	Amot	CAG-2|D0Kist1|Sii6	angiomotin	protein-coding
common_peak1-9998-95-120-0.229052107749419-0.702644961962743	chr13	98925675	98927096	+	0	NA	intron (NM_012026, intron 1 of 35)	intron (NM_012026, intron 1 of 35)	49735	NM_012026	110596	Mm.252718	NM_012026	ENSMUSG00000021662	Arhgef28	9230110L08Rik|AI323540|D13Bwg1089e|RIP2|Rgnef|RhoGEF|Rhoip2|p190RhoGEF	Rho guanine nucleotide exchange factor (GEF) 28	protein-coding
common_peak2-23477-16-22--0.405298313788951-0.440610794044987	chr15	73645254	73645984	+	0	NA	intron (NM_001033365, intron 2 of 10)	L1MA4|LINE|L1	24482	NM_001033365	268816	Mm.440635	NM_001033365	ENSMUSG00000072487	Mroh5	Gm628	maestro heat-like repeat family member 5	protein-coding
unique_peak1-5197-7-2-1.21412832957703-1.45399745587252	chr5	33351521	33351973	+	0	NA	Intergenic	L2a|LINE|L2	-9718	NM_011738	22629	Mm.332314	NM_011738	ENSMUSG00000018965	Ywhah	-	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide	protein-coding
unique_peak1-3919-9-3-1.18961340640422-1.57096726280955	chr2	25200214	25200680	+	0	NA	intron (NM_001029983, intron 6 of 12)	intron (NM_001029983, intron 6 of 12)	11405	NM_031843	83768	Mm.21440	NM_031843	ENSMUSG00000026958	Dpp7	DPPII|Dpp2|QPP	dipeptidylpeptidase 7	protein-coding
common_peak1-8870-37-61--0.428203238901056-0.759155512401768	chr11	35979446	35980709	+	0	NA	intron (NM_001290702, intron 7 of 27)	intron (NM_001290702, intron 7 of 27)	-186486	NM_170779	211652	Mm.31267	NM_170779		Wwc1	AA408228|AU017197|BC037006|Kibra|mKIAA0869	WW, C2 and coiled-coil domain containing 1	protein-coding
common_peak2-21941-19-34--0.72659569028328-0.974620203848502	chr12	29937869	29939043	+	0	NA	Intergenic	Intergenic	-274793	NM_001093775	17933	Mm.253067	NM_008666	ENSMUSG00000061911	Myt1l	2900046C06Rik|2900093J19Rik|C630034G21Rik|Nztf1|Pmng1|Png-1|mKIAA1106	myelin transcription factor 1-like	protein-coding
unique_peak2-39522-5-6--0.511735258063458-0.947717972411649	chr9	65533030	65533470	+	0	NA	intron (NM_001301307, intron 1 of 4)	intron (NM_001301307, intron 1 of 4)	8895	NM_001301307	18247	Mm.116749	NM_010952	ENSMUSG00000040652	Oaz2	AZ-2|AZ2|Oaz2-ps|Sez15	ornithine decarboxylase antizyme 2	protein-coding
unique_peak1-5785-32-3-3.27909201921966-8.25070305503181	chr6	56913506	56915015	+	0	NA	Intergenic	L1Md_F2|LINE|L1	7753	NM_134176	171194	Mm.222754	NM_134176	ENSMUSG00000071893	Vmn1r4	C230065D10Rik|V1rc21	vomeronasal 1 receptor 4	protein-coding
common_peak2-23142-24-29--0.113680692840802-0.304839791830752	chr14	105587904	105589029	+	0	NA	Intergenic	ORR1D2|LTR|MaLR	-11922	NM_134077	74213	Mm.474531	NM_134077	ENSMUSG00000022119	Rbm26	1700009P03Rik|AI447318|C230097K14Rik|C86225|MLZ-393|Pro1777|Se70-2	RNA binding motif protein 26	protein-coding
common_peak2-23930-18-22--0.210642804828661-0.321718508207525	chr16	11175592	11176597	+	0	NA	intron (NR_027502, intron 1 of 22)	CpG	392	NR_027502	106205	Mm.226860	NM_145931	ENSMUSG00000037965	Zc3h7a	A430104C18Rik|AI447294|AW556219|HSPC055|Zc3h7|Zc3hdc7	zinc finger CCCH type containing 7 A	protein-coding
common_peak2-30486-43-78--0.5212175626534-1.16907810239195	chr7	55841663	55842848	+	0	NA	Intergenic	Intergenic	-28799	NM_175531	243979	Mm.83689	NM_175531	ENSMUSG00000050425	Mrgprb2	4833406I20Rik|Mgrg14	MAS-related GPR, member B2	protein-coding
unique_peak2-36150-4-7--1.02346051385325-1.09384600808989	chr2	23508686	23509136	+	0	NA	Intergenic	Intergenic	-81287	NM_001165997	76857	Mm.276415	NM_029773	ENSMUSG00000026771	Spopl	4921517N04Rik|AU014935|BB233739|E430033K04Rik	speckle-type POZ protein-like	protein-coding
common_peak2-19992-10-9-0.0344872501214071-1.05503135781948	chr1	134095210	134095660	+	0	NA	TTS (NR_029777)	TTS (NR_029777)	770	NR_029777	723818		NR_029777	miRBase:MI0000646	Mir135b	Mirn135b	microRNA 135b	ncRNA
unique_peak2-39488-8-8--0.164702583494742-1.00793137938329	chr9	58447014	58447579	+	0	NA	intron (NM_001293673, intron 1 of 7)	B3|SINE|B2	17249	NM_009145	20320	Mm.15125	NM_009145	ENSMUSG00000032336	Nptn	AW554172|SDR-1|Sdfr1	neuroplastin	protein-coding
common_peak1-11030-22-23-0.0623216043662485-0.319130838712456	chr15	40363537	40364481	+	0	NA	Intergenic	Intergenic	-5186	NR_046185	432945	Mm.321981	NR_046185	ENSMUSG00000056332	Gm16294	EG432945|OTTMUSG00000033304	predicted gene 16294	ncRNA
common_peak1-13318-33-45--0.192224393531484-0.36493371439645	chr19	42170271	42171130	+	0	NA	intron (NM_145501, intron 1 of 8)	Charlie1b|DNA|MER1_type	5775	NM_145501	84095	Mm.117037	NM_145501	ENSMUSG00000025178	Pi4k2a	Pi4k2	phosphatidylinositol 4-kinase type 2 alpha	protein-coding
common_peak1-12279-9-6-0.382258484346616-1.11707584880836	chr17	44690944	44691474	+	0	NA	intron (NR_073425, intron 5 of 5)	L1M4b|LINE|L1	181916	NR_073425	12393	Mm.391013	NM_009820	ENSMUSG00000039153	Runx2	AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a	runt related transcription factor 2	protein-coding
common_peak1-15860-120-250--0.418581933459023-2.21318552527318	chr5	3927392	3928940	+	0	NA	promoter-TSS (NM_194462)	promoter-TSS (NM_194462)	-20	NM_194462	100986	Mm.46044	NM_194462	ENSMUSG00000040407	Akap9	5730481H23Rik|AKAP-9|AKAP450|AW545847|C79026|G1-448-15|PRKA9|mKIAA0803|mei2-5|repro12	A kinase (PRKA) anchor protein (yotiao) 9	protein-coding
unique_peak1-2795-12-3-1.64877598508764-2.36932189928148	chr17	13740763	13741452	+	0	NA	intron (NR_045436, intron 2 of 4)	intron (NR_045436, intron 2 of 4)	5853	NR_045436	72578	Mm.46549	NR_045436	ENSMUSG00000038347	2700054A10Rik	-	RIKEN cDNA 2700054A10 gene	ncRNA
common_peak1-8004-15-11-0.4272022498345-0.503257505534083	chr1	165768630	165769335	+	0	NA	intron (NM_010629, intron 10 of 20)	B1_Mus2|SINE|Alu	59172	NM_010629	16579	Mm.4651	NM_010629	ENSMUSG00000026585	Kifap3	KAP3|SMAP	kinesin-associated protein 3	protein-coding
unique_peak1-5787-8-1-2.00522241794757-2.05605744720049	chr6	57812174	57812517	+	0	NA	Intergenic	Lx3A|LINE|L1	-17894	NM_134183	171201	Mm.377179	NM_134183	ENSMUSG00000058588	Vmn1r21	V1rc28	vomeronasal 1 receptor 21	protein-coding
common_peak2-22197-22-45--0.876277850969609-1.55933022783608	chr12	110695599	110696388	+	0	NA	intron (NR_033813, intron 4 of 5)	intron (NR_033813, intron 4 of 5)	4328	NM_010052	13386	Mm.157069	NM_010052	ENSMUSG00000040856	Dlk1	AW742678|DLK-1|DlkI|FA1|Ly107|Peg9|SCP1|ZOG|pG2|pref-1	delta-like 1 homolog (Drosophila)	protein-coding
unique_peak2-39208-8-6-0.197867495889966-1.03789460276074	chr8	105937721	105938236	+	0	NA	Intergenic	Intergenic	-66544	NR_036588	69794	Mm.396139	NR_036588		1600027J07Rik	-	RIKEN cDNA 1600027J07 gene	ncRNA
unique_peak2-38681-7-19--1.52283726458917-1.55050753388976	chr7	100705918	100706614	+	0	NA	Intergenic	Lx6|LINE|L1	477877	NM_021427	58238	Mm.113787	NM_021427		Fam181b	A830059I20Rik|AB041569	family with sequence similarity 181, member B	protein-coding
common_peak2-30021-30-31-0.169675409491873-0.382130460680153	chr6	125231214	125232199	+	0	NA	intron (NM_009446, intron 3 of 4)	intron (NM_009446, intron 3 of 4)	4354	NM_009446	22144	Mm.287784	NM_009446	ENSMUSG00000067702	Tuba3a	AI528779|M[a]3|Tuba3	tubulin, alpha 3A	protein-coding
unique_peak1-3516-8-1-2.00522241794757-2.05605744720049	chr19	16393399	16393908	+	0	NA	intron (NM_008139, intron 3 of 6)	intron (NM_008139, intron 3 of 6)	-4159	NR_105832	102465218		NR_105832	miRBase:MI0021942	Mir496b	mmu-mir-496b	microRNA mir-496b	ncRNA
common_peak2-21396-21-8-1.39956426382392-2.11898024768848	chr11	80766035	80766650	+	0	NA	intron (NM_001034013, intron 2 of 9)	MLT1D|LTR|MaLR	94451	NM_029367	75622	Mm.26988	NM_029367	ENSMUSG00000053184	Spaca3	1700025M08Rik|ALLP17|Lyc3|SLLP1|mSLLP1	sperm acrosome associated 3	protein-coding
common_peak1-10717-15-22--0.511397205501357-0.50761186003982	chr14	61648758	61649612	+	0	NA	intron (NM_013869, intron 1 of 9)	intron (NM_013869, intron 1 of 9)	7639	NM_001164155	29820	Mm.281356	NM_013869	ENSMUSG00000060548	Tnfrsf19	AL023044|AW123854|TAJ|TAJ-ALPHA|TRADE|Troy	tumor necrosis factor receptor superfamily, member 19	protein-coding
unique_peak2-38914-3-6--1.22133801201688-1.08602067057793	chr8	14616104	14616459	+	0	NA	intron (NM_172910, intron 4 of 15)	intron (NM_172910, intron 4 of 15)	-272255	NM_012000	26889	Mm.254027	NM_012000	ENSMUSG00000026317	Cln8	mnd	ceroid-lipofuscinosis, neuronal 8	protein-coding
common_peak2-32236-10-8-0.186490343566457-1.078512453669	chr9	124068532	124069047	+	0	NA	Intergenic	L1Md_F2|LINE|L1	32507	NM_009917	12774	Mm.14302	NM_009917	ENSMUSG00000079227	Ccr5	AM4-7|CD195|Cmkbr5	chemokine (C-C motif) receptor 5	protein-coding
common_peak1-16482-11-9-0.186765489364251-0.344532117358383	chr5	137670432	137671065	+	0	NA	Intergenic	Intergenic	-58734	NM_009599	11423	Mm.255464	NM_009599	ENSMUSG00000023328	Ache	-	acetylcholinesterase	protein-coding
common_peak1-8065-22-20-0.254966682308644-0.421916810733237	chr1	175880304	175881170	+	0	NA	Intergenic	Lx4B|LINE|L1	-8114	NM_001045481	15950	Mm.463437	NM_008328	ENSMUSG00000039997	Ifi203	-	interferon activated gene 203	protein-coding
unique_peak1-2553-8-1-2.00522241794757-2.05605744720049	chr16	24034019	24034568	+	0	NA	Intergenic	Lx4B|LINE|L1	-45595	NM_009744	12053	Mm.347398	NM_009744	ENSMUSG00000022508	Bcl6	Bcl5	B cell leukemia/lymphoma 6	protein-coding
common_peak2-23127-9-8-0.0196884049619079-1.03275496310833	chr14	101640188	101640697	+	0	NA	Intergenic	LTRIS2|LTR|ERV1	-41156	NM_029680	76627	Mm.31415	NM_029680	ENSMUSG00000042888	Prr30	1700110M21Rik	proline rich 30	protein-coding
common_peak2-28365-14-10-0.439784541720347-0.519648556297791	chr4	137231091	137231468	+	0	NA	intron (NM_029563, intron 1 of 23)	intron (NM_029563, intron 1 of 23)	-6303	NM_001081155	110351	Mm.180763	NM_029563	ENSMUSG00000041351	Rap1gap	1300019I11Rik|2310004O14Rik|AI427470|ARPP-90|Rap1GAP1|Rap1ga1	Rap1 GTPase-activating protein	protein-coding
common_peak2-22971-12-11-0.0638134843664826-0.337263207250336	chr14	54603548	54603961	+	0	NA	Intergenic	Intergenic	269850	NM_001113358	13135	Mm.319038	NM_010015	ENSMUSG00000022174	Dad1	AI323713	defender against cell death 1	protein-coding
unique_peak2-33925-3-7--1.41398308995928-1.23214870625617	chr12	69724897	69725286	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	535082	NM_009093	20090	Mm.379006	NM_009093	ENSMUSG00000034892	Rps29	-	ribosomal protein S29	protein-coding
unique_peak1-1875-20-9-1.16614668970383-1.52222891542741	chr14	57894047	57894990	+	0	NA	intron (NM_030004, intron 7 of 7)	intron (NM_030004, intron 7 of 7)	122802	NM_030004	68631	Mm.25539	NM_030004	ENSMUSG00000021947	Cryl1	1110025H08Rik|A230106J09Rik|C85932|gul3dh	crystallin, lambda 1	protein-coding
common_peak2-30221-42-67--0.345133513383155-0.604904474110885	chr7	141474820	141476240	+	0	NA	intron (NM_001081331, intron 5 of 7)	L1MA9|LINE|L1	-58750	NM_007400	11489	Mm.439714	NM_007400	ENSMUSG00000054555	Adam12	Mltna|mKIAA4001	a disintegrin and metallopeptidase domain 12 (meltrin alpha)	protein-coding
common_peak2-20915-15-29--0.894725845052863-1.1282783422172	chr11	5761763	5762436	+	0	NA	5' UTR (NM_009636, exon 1 of 21)	5' UTR (NM_009636, exon 1 of 21)	230	NM_001291857	11568	Mm.4665	NM_009636	ENSMUSG00000020473	Aebp1	ACLP	AE binding protein 1	protein-coding
common_peak1-18252-17-12-0.517856620063946-0.647240723060192	chr8	33896607	33897409	+	0	NA	Intergenic	Intergenic	163490	NM_001177589	100042715	Mm.291093	NM_001177589		Gm3985	-	predicted gene 3985	protein-coding
common_peak2-21970-9-9--0.132314688483142-1.03275496310833	chr12	45074684	45075103	+	0	NA	Intergenic	L1Md_T|LINE|L1	236162	NM_013760	27362	Mm.27432	NM_013760	ENSMUSG00000014905	Dnajb9	AA408011|AA673251|AA673481|AW556981|ERdj4|Mdg1|mDj7	DnaJ (Hsp40) homolog, subfamily B, member 9	protein-coding
common_peak2-24895-28-34--0.0763238971235038-0.304271119602326	chr17	84073480	84074557	+	0	NA	Intergenic	L1M2|LINE|L1	-31485	NM_001171054	116871	Mm.277668	NM_054082	ENSMUSG00000055817	Mta3	1110002J22Rik|mKIAA1266	metastasis associated 3	protein-coding
common_peak2-31804-30-19-0.84774731460451-1.46094028072561	chr9	36796557	36797361	+	0	NA	intron (NM_001029838, intron 2 of 12)	B2_Mm2|SINE|B2	145715	NM_183171	235180	Mm.5264	NM_183171	ENSMUSG00000032118	Fez1	UNC-76|UNC76	fasciculation and elongation protein zeta 1 (zygin I)	protein-coding
common_peak2-19628-13-17--0.391452970804544-0.364171515310935	chr1	37998124	37998845	+	0	NA	Intergenic	Lx2B|LINE|L1	16120	NM_027111	69541	Mm.389117	NM_027111	ENSMUSG00000026085	Lyg1	2300002O18Rik	lysozyme G-like 1	protein-coding
common_peak2-24281-18-6-1.50556422917075-2.02801025126771	chr16	97658966	97659462	+	0	NA	3' UTR (NM_019517, exon 9 of 9)	3' UTR (NM_019517, exon 9 of 9)	25298	NM_010846	17857	Mm.33996	NM_010846	ENSMUSG00000000386	Mx1	AI893580|Mx|Mx-1	MX dynamin-like GTPase 1	protein-coding
common_peak1-13051-29-32-0.0678959612566574-0.330208782692001	chr19	5877127	5878128	+	0	NA	promoter-TSS (NM_134154)	promoter-TSS (NM_134154)	-839	NM_134154	107375	Mm.5323	NM_134154	ENSMUSG00000024818	Slc25a45	AW491445	solute carrier family 25, member 45	protein-coding
common_peak1-16992-120-171-0.126696865789651-0.475901938046872	chr6	88044155	88046052	+	0	NA	intron (NM_133933, intron 4 of 9)	intron (NM_133933, intron 4 of 9)	9149	NR_105795	102465196		NR_105795	miRBase:MI0021905	Mir6376	mmu-mir-6376	microRNA mir-6376	ncRNA
common_peak1-17470-9-6-0.382258484346616-1.11707584880836	chr7	19832184	19832631	+	0	NA	TTS (NM_207525)	TTS (NM_207525)	18669	NM_207525	403187	Mm.239583	NM_207525		Opa3	D630048P19Rik|Gm1425|Gm472	optic atrophy 3	protein-coding
common_peak2-20506-6-5--0.0195643903408542-0.947717972411649	chr10	59636533	59636854	+	0	NA	Intergenic	LTRIS3|LTR|ERV1	45315	NM_016803	53374	Mm.12866	NM_016803	ENSMUSG00000057337	Chst3	C6ST|C6ST-1|GST-0	carbohydrate (chondroitin 6/keratan) sulfotransferase 3	protein-coding
unique_peak1-1773-16-10-0.658832023630764-0.699649909729472	chr14	7962149	7962816	+	0	NA	intron (NM_001270812, intron 2 of 5).3	intron (NM_001270812, intron 2 of 5).3	-24511	NM_001024712	100042149	Mm.396155	NM_001024712	ENSMUSG00000092167	Gm3696	544988|ENSMUSG00000056940|Gm10014	predicted gene 3696	protein-coding
common_peak1-8378-11-11--0.0762689164695427-0.301029995663976	chr10	61475831	61476465	+	0	NA	Intergenic	Intergenic	-34292	NM_007731	12817	Mm.300931	NM_007731	ENSMUSG00000058806	Col13a1	-	collagen, type XIII, alpha 1	protein-coding
common_peak1-7957-30-46--0.384913442185765-0.566504029620424	chr1	154033751	154034903	+	0	NA	Intergenic	Intergenic	-96877	NM_197990	69399	Mm.278031	NM_197990	ENSMUSG00000032666	1700025G04Rik	2610510E02Rik|2900042O04Rik|ENSMUSG00000073540	RIKEN cDNA 1700025G04 gene	protein-coding
common_peak1-9880-9-7-0.18961340640422-1.05908390183068	chr12	84385123	84385559	+	0	NA	intron (NM_001267625, intron 7 of 10)	MIR|SINE|MIR	-345199	NR_046045	74283	Mm.398247	NR_046045		1700085C21Rik	-	RIKEN cDNA 1700085C21 gene	ncRNA
common_peak1-18167-6-9--0.75652998450706-1.11707584880836	chr8	13651899	13652343	+	0	NA	intron (NM_009025, intron 1 of 23)	intron (NM_009025, intron 1 of 23)	25466	NM_009025	19414	Mm.18517	NM_009025	ENSMUSG00000031453	Rasa3	AI326412|C86362|E130011G04|GAPIII|scat	RAS p21 protein activator 3	protein-coding
common_peak2-19559-8-9--0.316705676939792-1.03275496310833	chr1	7397011	7397481	+	0	NA	Intergenic	Intergenic	318245	NM_183028	319263	Mm.21539	NM_183028	ENSMUSG00000051285	Pcmtd1	8430411F12Rik|A030012M09Rik	protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	protein-coding
unique_peak2-37976-2-6--1.72480917832092-1.26211192963361	chr6	3287887	3288151	+	0	NA	Intergenic	IAPEY3-int|LTR|ERVK	49500	NR_036696	667335	Mm.380219	NR_036696		Gm8579	EG667335	spermatogenesis associated glutamate (E)-rich protein 4a pseudogene	pseudo
unique_peak1-4339-11-5-0.923731083530457-1.477227296591	chr2	153260233	153260881	+	0	NA	intron (NM_001001986, intron 2 of 7)	intron (NM_001001986, intron 2 of 7)	9658	NM_001001986	329540	Mm.50600	NM_001001986	ENSMUSG00000061411	Nol4l	4931410H15|8430427H17Rik|AI429157|Gm1636	nucleolar protein 4-like	protein-coding
common_peak2-31999-11-19--0.813234510635749-0.769930178837768	chr9	70863586	70864294	+	0	NA	Intergenic	Intergenic	-81325	NM_008280	15450	Mm.390187	NM_008280	ENSMUSG00000032207	Lipc	AI256194|HL|Hpl	lipase, hepatic	protein-coding
common_peak2-20381-26-33--0.159563749091877-0.332062764479297	chr10	18318157	18319302	+	0	NA	intron (NM_001033258, intron 29 of 33)	intron (NM_001033258, intron 29 of 33)	-52847	NM_019487	56016	Mm.35551	NM_019487	ENSMUSG00000019853	Hebp2	SOUL	heme binding protein 2	protein-coding
common_peak2-30039-14-6-1.09186123830004-1.16633110333236	chr6	125591613	125592011	+	0	NA	intron (NM_011708, intron 27 of 51)	intron (NM_011708, intron 27 of 51)	-48625	NM_153589	243634	Mm.333398	NM_153589	ENSMUSG00000038115	Ano2	BC033409|Tmem16b	anoctamin 2	protein-coding
unique_peak2-37860-3-4--0.73591118484664-0.864171920961574	chr5	136551646	136552012	+	0	NA	Intergenic	Intergenic	-7957	NM_133914	54153	Mm.290655	NM_133914	ENSMUSG00000004952	Rasa4	AA793972|AW112107|BB079060|CAPRI|GAPL	RAS p21 protein activator 4	protein-coding
common_peak1-10290-21-12-0.869049547125143-1.18646456559501	chr13	63187144	63187983	+	0	NA	intron (NM_001289926, intron 5 of 15)	B1_Mus1|SINE|Alu	121310	NM_001289924	72061	Mm.188105	NM_028079	ENSMUSG00000021458	2010111I01Rik	2300006M17Rik|AP-O|Aopep	RIKEN cDNA 2010111I01 gene	protein-coding
common_peak2-24912-38-76--0.695333881396371-1.6858729052488	chr17	84957899	84958990	+	0	NA	intron (NM_177606, intron 4 of 29)	MTEa|LTR|MaLR	47209	NM_177606	213556	Mm.215159	NM_177606	ENSMUSG00000040852	Plekhh2	AI256725|E030001K05|mKIAA2028	pleckstrin homology domain containing, family H (with MyTH4 domain) member 2	protein-coding
common_peak2-23535-19-26--0.352200175501782-0.416752705545949	chr15	77888296	77889189	+	0	NA	intron (NM_007583, intron 1 of 3)	L2b|LINE|L2	60968	NM_007583	12300	Mm.277338	NM_007583		Cacng2	AW060990|B230105C07Rik|B930041E13Rik|stargazer|stargazin|stg|wag|waggler	calcium channel, voltage-dependent, gamma subunit 2	protein-coding
common_peak2-19664-35-34-0.302087241517538-0.529980592868312	chr1	54438362	54439280	+	0	NA	Intergenic	Lx9|LINE|L1	56994	NM_001033194	98488	Mm.25856	NM_001033194	ENSMUSG00000041303	Gtf3c3	AL022818|TF3C-gamma|TFIIIC102	general transcription factor IIIC, polypeptide 3	protein-coding
unique_peak1-3065-10-1-2.35641534500877-2.57096726280955	chr18	10920468	10921108	+	0	NA	Intergenic	Intergenic	-131720	NM_010258	14465	Mm.329287	NM_010258	ENSMUSG00000005836	Gata6	AA410133|GATA-6	GATA binding protein 6	protein-coding
common_peak1-15375-9-25--1.51082631173687-2.00244947055753	chr4	59549386	59550036	+	0	NA	intron (NM_178164, intron 1 of 13)	B2_Mm2|SINE|B2	12525	NM_178164	230257	Mm.331640	NM_144904	ENSMUSG00000028382	Ptbp3	5830471K22Rik|AA407443|AI462022|AW107884|C86549|Rod1	polypyrimidine tract binding protein 3	protein-coding
common_peak2-23643-21-17-0.399564263823923-0.561823156887258	chr15	83592906	83593602	+	0	NA	Intergenic	Intergenic	-17199	NM_172610	223726	Mm.36395	NM_172610	ENSMUSG00000041708	Mpped1	6230403M19|AW456965|D15Bwg0669e	metallophosphoesterase domain containing 1	protein-coding
common_peak2-21232-26-32--0.116495027199991-0.315041925765944	chr11	65807057	65807771	+	0	NA	intron (NM_001099633, intron 38 of 68)	intron (NM_001099633, intron 38 of 68)	174639	NM_001099633	237806	Mm.264210	NM_001099633	ENSMUSG00000056752	Dnah9	9030022M04|A230091C01|C230051G16|D11Ertd686e|Dnahc9|mKIAA0357	dynein, axonemal, heavy chain 9	protein-coding
common_peak2-32362-11-9-0.186765489364251-0.344532117358383	chrX	98890663	98891269	+	0	NA	Intergenic	Intergenic	38520	NM_009910	12766	Mm.12876	NM_009910	ENSMUSG00000050232	Cxcr3	Cd183|Cmkar3	chemokine (C-X-C motif) receptor 3	protein-coding
common_peak2-28687-15-12-0.311725032414564-0.425539671739611	chr5	33274145	33274599	+	0	NA	intron (NM_001025426, intron 25 of 42)	Lx7|LINE|L1	68002	NM_001025426	277854	Mm.101524	NM_177786	ENSMUSG00000037426	Depdc5	AV016528	DEP domain containing 5	protein-coding
common_peak1-13695-10-6-0.549060422951165-1.21398586181642	chr2	30251540	30251994	+	0	NA	exon (NM_001290508, exon 5 of 9)	exon (NM_001290508, exon 5 of 9)	3993	NM_001290508	57170	Mm.285167	NM_020329	ENSMUSG00000026856	Dolpp1	0610011H20Rik|AB030189|LSFR2	dolichyl pyrophosphate phosphatase 1	protein-coding
common_peak2-31948-8-21--1.45420920068973-1.61268301619756	chr9	65021012	65021661	+	0	NA	intron (NM_008988, intron 2 of 13)	PB1D10|SINE|Alu	32340	NM_008988	19289	Mm.41529	NM_008988	ENSMUSG00000032394	Igdcc3	2810401C09Rik|AI851425|Punc|WI-14920	immunoglobulin superfamily, DCC subclass, member 3	protein-coding
unique_peak1-3827-9-2-1.60465090568306-1.87199725847353	chr2	158777208	158777734	+	0	NA	Intergenic	Intergenic	156928	NM_001291144	71715	Mm.315652	NM_145742	ENSMUSG00000027655	Dhx35	1200009D07Rik|Ddx35	DEAH (Asp-Glu-Ala-His) box polypeptide 35	protein-coding
common_peak2-31095-28-34--0.0763238971235038-0.304271119602326	chr8	26118430	26119398	+	0	NA	intron (NM_007404, intron 1 of 22)	intron (NM_007404, intron 1 of 22)	8480	NM_001270996	11502	Mm.28908	NM_007404	ENSMUSG00000031555	Adam9	AU020942|MDC9|Mltng|mKIAA0021	a disintegrin and metallopeptidase domain 9 (meltrin gamma)	protein-coding
common_peak2-20982-160-234-0.176296199376917-0.746051637482463	chr11	21238216	21239817	+	0	NA	intron (NM_139297, intron 3 of 9)	intron (NM_139297, intron 3 of 9)	5662	NR_035454	100316753		NR_035454		Mir1933	mmu-mir-1933	microRNA 1933	ncRNA
common_peak1-18316-183-300-0.0528861891001036-0.352126738590006	chr8	47989498	47992256	+	0	NA	Intergenic	Intergenic	-81402	NM_177304	320981	Mm.211429	NM_177304	ENSMUSG00000038173	Enpp6	4833421B01Rik|B830047L21Rik|D8Ertd514e|E-NPP 6|Npp6	ectonucleotide pyrophosphatase/phosphodiesterase 6	protein-coding
common_peak2-24621-61-96--0.217163512437788-0.506226713128487	chr17	34031200	34032673	+	0	NA	Intergenic	ORR1A2-int|LTR|MaLR	-4358	NM_001195298	100502766	Mm.335713	NM_001195298	ENSMUSG00000079553	Kifc1	100042970|Gm4137|HSET|KNSL2|Kifc5a|Knsl2a|Tctex-7|Tctex-7A|Tctex7|Tctex7a	kinesin family member C1	protein-coding
common_peak2-25512-128-163-0.307453997459992-1.25220636855428	chr19	5609307	5610803	+	0	NA	promoter-TSS (NM_178637)	promoter-TSS (NM_178637)	39	NM_001199249	81601	Mm.228930	NM_178637	ENSMUSG00000024926	Kat5	AI839539|CPLA2|Htatip|Htatip1|PLIP|Tip55|Tip60	K(lysine) acetyltransferase 5	protein-coding
common_peak1-10879-97-121-0.253263733929395-0.771883630780981	chr15	77036045	77038451	+	0	NA	intron (NM_001110827, intron 2 of 13)	PB1D9|SINE|Alu	-53006	NM_001286418	93686	Mm.202774	NM_053104	ENSMUSG00000033565	Rbfox2	Fbm2|Fxh|Hrnbp2|Rbm9	RNA binding protein, fox-1 homolog (C. elegans) 2	protein-coding
common_peak2-25406-89-120-0.116103517551408-0.405744072202717	chr19	37206679	37208407	+	0	NA	intron (NM_001290829, intron 3 of 9)	intron (NM_001290829, intron 3 of 9)	-40790	NR_045329	319931	Mm.446730	NR_045329	ENSMUSG00000097591	A330032B11Rik	-	RIKEN cDNA A330032B11 gene	ncRNA
unique_peak1-3089-10-1-2.35641534500877-2.57096726280955	chr18	24714591	24715036	+	0	NA	Intergenic	MERVL-int|LTR|ERVL	-26108	NM_144861	225283	Mm.28427	NM_144861	ENSMUSG00000040446	Rprd1a	C77387|mKIAA4077	regulation of nuclear pre-mRNA domain containing 1A	protein-coding
unique_peak1-751-10-6-0.549060422951165-1.21398586181642	chr10	115362698	115363242	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-92449	NM_011217	19279	Mm.336316	NM_011217	ENSMUSG00000020151	Ptprr	Gmcp1|PTP-SL|PTPBR7|RPTPRR|mPTP213	protein tyrosine phosphatase, receptor type, R	protein-coding
unique_peak2-37637-7-5-0.214128329577033-1.01466476204226	chr5	73559960	73560349	+	0	NA	intron (NM_028194, intron 3 of 62)	intron (NM_028194, intron 3 of 62)	87703	NM_028194	72313	Mm.260594	NM_028194	ENSMUSG00000070733	Fryl	2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|mKIAA0826	furry homolog-like (Drosophila)	protein-coding
common_peak2-20544-9-14--0.717277189204299-0.53895475198017	chr10	67549187	67549706	+	0	NA	Intergenic	Intergenic	107100	NM_001081346	170799	Mm.209844	NM_133244	ENSMUSG00000037846	Rtkn2	B130039D23Rik|Mbf|Plekhk1	rhotekin 2	protein-coding
common_peak2-28907-23-27--0.0855874175485232-0.30512735654709	chr5	92137918	92138561	+	0	NA	Intergenic	Intergenic	58087	NR_045383	73452	Mm.396233	NR_045383		1700063O14Rik	-	RIKEN cDNA 1700063O14 gene	ncRNA
common_peak2-27553-11-10-0.0492619656143161-0.31137425193576	chr3	96488410	96488853	+	0	NA	exon (NM_001081139, exon 10 of 13)	exon (NM_001081139, exon 10 of 13)	-11667	NM_146135	229615	Mm.1635	NM_018812	ENSMUSG00000028101	Pias3	Pias3l	protein inhibitor of activated STAT 3	protein-coding
unique_peak1-5081-16-3-2.11826364226806-2.65002542325363	chr4	144929650	144930394	+	0	NA	Intergenic	MTEb|LTR|MaLR	-24972	NM_009401	21941	Mm.12810	NM_009401	ENSMUSG00000028602	Tnfrsf8	Cd30|D1S166E|Ki|Ki-1	tumor necrosis factor receptor superfamily, member 8	protein-coding
unique_peak1-3264-8-1-2.00522241794757-2.05605744720049	chr18	67500397	67500917	+	0	NA	intron (NR_033214, intron 1 of 3)	intron (NR_033214, intron 1 of 3)	-2561	NM_007702	12683	Mm.449	NM_007702	ENSMUSG00000024526	Cidea	AW212747	cell death-inducing DNA fragmentation factor, alpha subunit-like effector A	protein-coding
unique_peak1-4702-8-3-1.00522241794757-1.39487600375387	chr3	101322689	101323185	+	0	NA	Intergenic	Intergenic	85693	NM_144900	11928	Mm.280103	NM_144900	ENSMUSG00000033161	Atp1a1	Atpa-1|BC010319	ATPase, Na+/K+ transporting, alpha 1 polypeptide	protein-coding
unique_peak2-37174-6-6--0.241956811677302-0.947717972411649	chr4	46563696	46564104	+	0	NA	intron (NM_178893, intron 4 of 12)	intron (NM_178893, intron 4 of 12)	-14887	NM_029077	74735	Mm.240252	NM_029077	ENSMUSG00000039853	Trim14	5830400N10Rik|pub	tripartite motif-containing 14	protein-coding
common_peak2-31503-22-29--0.259606490521114-0.36542888694933	chr8	107133470	107134218	+	0	NA	intron (NM_001252628, intron 17 of 17)	ID_B1|SINE|B4	14452	NM_007663	12556	Mm.19423	NM_007663	ENSMUSG00000031881	Cdh16	-	cadherin 16	protein-coding
unique_peak2-33857-2-7--1.91745425626332-1.45399745587252	chr12	17735717	17736039	+	0	NA	intron (NM_016677, intron 1 of 3)	intron (NM_016677, intron 1 of 3)	38258	NM_016677	53602	Mm.313619	NM_016677	ENSMUSG00000071379	Hpcal1	NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3	hippocalcin-like 1	protein-coding
common_peak2-28542-22-43--0.812147513549893-1.34810744351377	chr5	3343664	3344921	+	0	NA	promoter-TSS (NM_009873)	promoter-TSS (NM_009873)	-20	NM_009873	12571	Mm.31672	NM_009873	ENSMUSG00000040274	Cdk6	5830411I20|AI504062|Crk2	cyclin-dependent kinase 6	protein-coding
common_peak2-22018-126-130-0.604237198414375-3.46684614899259	chr12	57538268	57540283	+	0	NA	Intergenic	Intergenic	91132	NR_045082	104798	Mm.310950	NR_045082		E030019B13Rik	AI413669	RIKEN cDNA E030019B13 gene	ncRNA
common_peak1-18902-10-13--0.450939577048835-0.386243247519795	chr9	38718344	38718821	+	0	NA	Intergenic	Intergenic	-19176	NM_146272	258269	Mm.377403	NM_146272	ENSMUSG00000063221	Olfr930	MOR171-46	olfactory receptor 930	protein-coding
common_peak2-21086-11-10-0.0492619656143161-0.31137425193576	chr11	51059231	51059802	+	0	NA	Intergenic	RodERV21-int|LTR|ERV1	16937	NM_177567	193286	Mm.80975	NM_177567	ENSMUSG00000045942	BC049762	4930503F14	cDNA sequence BC049762	protein-coding
unique_peak1-1109-11-4-1.18676548936425-1.68134727924692	chr11	93989194	93989718	+	0	NA	Intergenic	Intergenic	-83312	NM_009427	22057	Mm.259673	NM_009427	ENSMUSG00000037573	Tob1	Tob|Trob	transducer of ErbB-2.1	protein-coding
common_peak1-12023-10-8-0.186490343566457-1.078512453669	chr17	15830789	15831350	+	0	NA	Intergenic	Intergenic	-10862	NM_007690	12648	Mm.8137	NM_007690	ENSMUSG00000023852	Chd1	4930525N21Rik|AI851787|AW555109	chromodomain helicase DNA binding protein 1	protein-coding
common_peak1-11434-36-56--0.353568927996987-0.561693437916856	chr15	99972698	99974048	+	0	NA	intron (NM_001159361, intron 4 of 37)	intron (NM_001159361, intron 4 of 37)	-11454	NM_172819	239667	Mm.243658	NM_172819	ENSMUSG00000023026	Dip2b	4932422C22|AI317237|AI854602|mKIAA1463	DIP2 disco-interacting protein 2 homolog B (Drosophila)	protein-coding
unique_peak2-38097-2-7--1.91745425626332-1.45399745587252	chr6	66943395	66943756	+	0	NA	intron (NM_001177560, intron 3 of 4)	intron (NM_001177560, intron 3 of 4)	-43018	NR_040278	320172	Mm.449039	NR_040278	ENSMUSG00000087231	E230016M11Rik	-	RIKEN cDNA E230016M11 gene	ncRNA
common_peak1-16196-87-123-0.0414407953942941-0.322659637555749	chr5	92744638	92747498	+	0	NA	Intergenic	Intergenic	-7018	NM_172713	231452	Mm.86564	NM_172713	ENSMUSG00000029415	Sdad1	4931421J16|AA591032|AW538460	SDA1 domain containing 1	protein-coding
common_peak1-15531-17-16-0.130833496954699-0.356936432242225	chr4	118409075	118409856	+	0	NA	Intergenic	Intergenic	2329	NM_146852	258851	Mm.377719	NM_146852	ENSMUSG00000070820	Olfr1339	MOR258-2	olfactory receptor 1339	protein-coding
common_peak2-26660-45-69--0.268924991600095-0.508177771104095	chr2	121412912	121414491	+	0	NA	intron (NM_172673, intron 2 of 14)	intron (NM_172673, intron 2 of 14)	81242	NM_001290986	241627	Mm.293284	NM_030234	ENSMUSG00000027242	Wdr76	5830411K18Rik|6030457D09|AA517836	WD repeat domain 76	protein-coding
common_peak1-14374-33-35-0.161412561083217-0.373466121463208	chr2	167931488	167932463	+	0	NA	Intergenic	RSINE1|SINE|B4	25471	NM_021409	58220	Mm.292834	NM_021409	ENSMUSG00000044641	Pard6b	AV025615|Par6b	par-6 family cell polarity regulator beta	protein-coding
unique_peak2-36039-7-5-0.214128329577033-1.01466476204226	chr19	44264922	44265355	+	0	NA	intron (NM_181422, intron 2 of 14)	B1_Mm|SINE|Alu	1794	NM_181422	329064	Mm.308481	NM_181422	ENSMUSG00000037578	Pkd2l1	B830002B15|BC046386|PCL|PKD2L|Pkdl|TRPP3	polycystic kidney disease 2-like 1	protein-coding
common_peak1-10082-13-17--0.391452970804544-0.364171515310935	chr13	23573626	23574334	+	0	NA	intron (NM_001289614, intron 4 of 6)	intron (NM_001289614, intron 4 of 6)	6746	NM_001289615	238555	Mm.129668	NM_175938		Btn2a2	Btn2|D030063K05	butyrophilin, subfamily 2, member A2	protein-coding
common_peak2-27039-8-14--0.901668177660948-0.660903317613906	chr2	180215868	180216522	+	0	NA	Intergenic	Intergenic	-18486	NM_018766	18216	Mm.301712	NM_018766	ENSMUSG00000027568	Ntsr1	NT-1R|NTR-1|NTR1	neurotensin receptor 1	protein-coding
unique_peak1-4121-8-1-2.00522241794757-2.05605744720049	chr2	85238124	85238586	+	0	NA	Intergenic	Intergenic	2333	NM_146865	258865	Mm.389295	NM_146865	ENSMUSG00000075221	Olfr992	MOR203-1	olfactory receptor 992	protein-coding
unique_peak1-4302-14-0-3.89921616035764-4.8164799306237	chr2	146530882	146531492	+	0	NA	Intergenic	Intergenic	-150438	NM_001033298	228730	Mm.292352	NM_001033298	ENSMUSG00000074749	Kiz	Gm114|Ncrna00153|Plk1s1	kizuna centrosomal protein	protein-coding
common_peak2-25211-39-40-0.25820924230107-0.498996592876743	chr18	60891243	60892428	+	0	NA	Intergenic	Intergenic	-18792	NM_008306	15531	Mm.181862	NM_008306	ENSMUSG00000054008	Ndst1	1200015G06Rik|Hsst|NDST-1|b2b2230Clo	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1	protein-coding
unique_peak1-3753-7-2-1.21412832957703-1.45399745587252	chr19	53474630	53474973	+	0	NA	Intergenic	Intergenic	-9738	NM_172429	76479	Mm.313687	NM_172429	ENSMUSG00000025024	Smndc1	2410004J23Rik|4933440I19Rik	survival motor neuron domain containing 1	protein-coding
common_peak1-12533-106-128-0.326539599582465-1.16861781835463	chr18	84588622	84590709	+	0	NA	intron (NM_001033341, intron 4 of 8)	(CA)n|Simple_repeat|Simple_repeat	169231	NM_001033341	240476	Mm.329575	NM_001033341	ENSMUSG00000048410	Zfp407	6430585N13Rik|Gm333|Gm334|Gm948|ZNF407	zinc finger protein 407	protein-coding
common_peak1-16050-37-37-0.278065558042234-0.513362016391488	chr5	41707598	41708781	+	0	NA	Intergenic	MTEa|LTR|MaLR	391205	NM_027295	100972	Mm.41555	NM_027295	ENSMUSG00000029128	Rab28	2700023P08Rik|AW496496	RAB28, member RAS oncogene family	protein-coding
unique_peak2-36984-9-18--1.05831410703937-0.965105923112245	chr3	117359985	117360774	+	0	NA	intron (NM_029425, intron 3 of 5)	intron (NM_029425, intron 3 of 5)	82000	NM_029425	75769	Mm.72187	NM_029425	ENSMUSG00000033342	Lppr5	4833424O15Rik|PRG-5|Pap2d	lipid phosphate phosphatase-related protein type 5	protein-coding
common_peak2-25628-9-9--0.132314688483142-1.03275496310833	chr19	9074841	9075346	+	0	NA	intron (NR_104460, intron 3 of 6)	intron (NR_104460, intron 3 of 6)	11319	NM_001286518	66395	Mm.203866	NM_009643	ENSMUSG00000069833	Ahnak	DY6	AHNAK nucleoprotein (desmoyokin)	protein-coding
unique_peak1-5222-7-2-1.21412832957703-1.45399745587252	chr5	36729539	36729968	+	0	NA	intron (NM_030889, intron 1 of 26)	intron (NM_030889, intron 1 of 26)	11035	NM_030889	81840	Mm.34113	NM_030889	ENSMUSG00000029093	Sorcs2	N28137|mKIAA1329	sortilin-related VPS10 domain containing receptor 2	protein-coding
common_peak2-20004-34-41--0.0102488957774947-0.30364629078125	chr1	134560114	134561395	+	0	NA	intron (NM_182716, intron 2 of 29)	ORR1A4|LTR|MaLR	-21319	NM_001160316	269116	Mm.326702	NM_182716	ENSMUSG00000026442	Nfasc	AA387016|D430023G06Rik|NF|mKIAA0756	neurofascin	protein-coding
common_peak1-17927-12-5-1.06381348436648-1.78669045979184	chr7	126922508	126923064	+	0	NA	intron (NM_212442, intron 10 of 14)	intron (NM_212442, intron 10 of 14)	14786	NM_027698	71151	Mm.274160	NM_027698	ENSMUSG00000030929	Eri2	4933424N09Rik|Exod1|mKIAA1504	exoribonuclease 2	protein-coding
common_peak2-21383-28-52--0.674961334741736-1.23110482636734	chr11	79253824	79254854	+	0	NA	intron (NM_010897, intron 17 of 57)	intron (NM_010897, intron 17 of 57)	43194	NR_045305	104522	Mm.436987	NR_045305	ENSMUSG00000091523	AU040972	AU040954	expressed sequence AU040972	ncRNA
common_peak1-11717-18-10-0.853487532591054-1.03889213727317	chr16	32660882	32661602	+	0	NA	intron (NM_001110147, intron 1 of 13)	intron (NM_001110147, intron 1 of 13)	7041	NR_033493	675921	Mm.404316	NR_033493	ENSMUSG00000075265	Tnk2os	ENSMUSG00000075265|Gm10818	tyrosine kinase, non-receptor 2, opposite strand	ncRNA
common_peak2-28068-44-54-0.0405331210438753-0.318638672819241	chr4	66827337	66828772	+	0	NA	Intergenic	ORR1E|LTR|MaLR	339209	NM_021297	21898	Mm.38049	NM_021297	ENSMUSG00000039005	Tlr4	Lps|Ly87|Ran/M1|Rasl2-8	toll-like receptor 4	protein-coding
common_peak1-9481-10-6-0.549060422951165-1.21398586181642	chr11	106612578	106613176	+	0	NA	intron (NR_073165, intron 1 of 9)	intron (NR_073165, intron 1 of 9)	337	NM_001033435	380732	Mm.343952	NM_001033435	ENSMUSG00000040528	Milr1	Allergin-1|Gm885|Mca32	mast cell immunoglobulin like receptor 1	protein-coding
common_peak1-8529-9-11--0.395349094316936-0.344532117358383	chr10	88357031	88357696	+	0	NA	intron (NM_145423, intron 3 of 14)	intron (NM_145423, intron 3 of 14)	8626	NM_145423	216225	Mm.77381	NM_145423	ENSMUSG00000020062	Slc5a8	Ait|SMCT	solute carrier family 5 (iodide transporter), member 8	protein-coding
unique_peak2-35893-8-11--0.579740082773585-1.14218153353838	chr19	3226312	3226908	+	0	NA	Intergenic	MMVL30-int|LTR|ERV1	-28907	NR_045304	70011	Mm.393871	NR_045304		1700030N03Rik	1700087C08Rik	RIKEN cDNA 1700030N03 gene	ncRNA
unique_peak1-4275-9-2-1.60465090568306-1.87199725847353	chr2	136620732	136621260	+	0	NA	Intergenic	LTR16E1|LTR|ERVL	81810	NM_001291056	20614	Mm.45953	NM_011428	ENSMUSG00000027273	Snap25	Bdr|GENA70|SNAP-25|SUP|sp	synaptosomal-associated protein 25	protein-coding
unique_peak2-38210-7-15--1.20090916970181-0.947446088118041	chr6	113483451	113484195	+	0	NA	exon (NM_001033244, exon 2 of 44)	exon (NM_001033244, exon 2 of 44)	2147	NM_001033244	211651	Mm.160061	NM_001033244	ENSMUSG00000034023	Fancd2	2410150O07Rik|AU015151|BB137857|FA-D2|FA4|FACD|FAD|FANCD	Fanconi anemia, complementation group D2	protein-coding
common_peak2-22853-6-8--0.60452689106201-1.03789460276074	chr14	25708388	25708847	+	0	NA	Intergenic	L1MC4a|LINE|L1	254110	NR_045718	75862	Mm.109191	NR_045718		4930572O13Rik	-	RIKEN cDNA 4930572O13 gene	ncRNA
common_peak2-22664-46-65--0.146398176109652-0.344471032458745	chr13	96670065	96671573	+	0	NA	Intergenic	Intergenic	-8942	NM_027711	544963	Mm.38878	NM_027711	ENSMUSG00000021676	Iqgap2	4933417J23Rik|A630053O10|AI788777	IQ motif containing GTPase activating protein 2	protein-coding
common_peak2-20083-12-14--0.25811461052088-0.309074325783021	chr1	155082861	155083512	+	0	NA	intron (NM_010683, intron 18 of 27)	(TG)n|Simple_repeat|Simple_repeat	-49609	NM_008485	16782	Mm.329272	NM_008485	ENSMUSG00000026479	Lamc2	AA589349	laminin, gamma 2	protein-coding
unique_peak1-7026-9-4-0.867685311516858-1.36011389749466	chr8	126662388	126662900	+	0	NA	Intergenic	Intergenic	-92650	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
common_peak2-23316-8-10--0.454209200689727-1.078512453669	chr15	36836732	36837212	+	0	NA	Intergenic	Intergenic	100185	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
common_peak1-19345-6-7--0.434601889619698-0.97990265578305	chrX	8084263	8084742	+	0	NA	Intergenic	ORR1A2|LTR|MaLR	17578	NM_001126491	546263	Mm.475615	NM_001126491	ENSMUSG00000079704	Gm14459	OTTMUSG00000016698	predicted gene 14459	protein-coding
common_peak2-19813-16-12-0.417823924126969-0.489164546851866	chr1	88454884	88455455	+	0	NA	intron (NM_008801, intron 1 of 4)	PB1D10|SINE|Alu	23907	NM_008801	18582	Mm.12925	NM_008801	ENSMUSG00000026239	Pde6d	AI841218|PrBP/delta	phosphodiesterase 6D, cGMP-specific, rod, delta	protein-coding
common_peak1-10046-64-106--0.276020584692543-0.66421041529294	chr13	17804269	17806041	+	0	NA	Intergenic	Intergenic	17908	NM_025479	66308	Mm.291109	NM_025479	ENSMUSG00000012429	Mplkip	2810021B07Rik|C330007M08Rik|Ttdn1	M-phase specific PLK1 intereacting protein	protein-coding
common_peak2-25296-40-71--0.510949318691214-1.01621186439953	chr18	70568213	70569330	+	0	NA	Intergenic	Intergenic	-63337	NM_029019	170461	Mm.83623	NM_029019	ENSMUSG00000079608	Stard6	1700011K09Rik|4833424I06Rik|4933429L05Rik|AI644424	StAR-related lipid transfer (START) domain containing 6	protein-coding
unique_peak1-5703-10-4-1.03448725012141-1.5150158574804	chr6	35542993	35543584	+	0	NA	Intergenic	ORR1C1|LTR|MaLR	-53400	NM_008098	14489	Mm.182746	NM_008098	ENSMUSG00000029840	Mtpn	5033418D15Rik|Gcdp|V1	myotrophin	protein-coding
common_peak2-22744-65-115--0.365815055650445-0.964715080555028	chr13	111488680	111489930	+	0	NA	Intergenic	Lx8|LINE|L1	304053	NM_152804	20620	Mm.380	NM_152804	ENSMUSG00000021701	Plk2	Snk	polo-like kinase 2	protein-coding
unique_peak2-39397-1-5--2.2120195109379-1.32905871926422	chr9	30885679	30886091	+	0	NA	Intergenic	Intergenic	47656	NM_172765	235132	Mm.239355	NM_172765	ENSMUSG00000047412	Zbtb44	6030404E16Rik|Btbd15|E230011F09	zinc finger and BTB domain containing 44	protein-coding
common_peak2-24312-32-42--0.147172735482438-0.325162986021101	chr17	42908647	42910433	+	0	NA	Intergenic	L1Md_F3|LINE|L1	-30412	NM_001033493	435529	Mm.136350	NM_001033493	ENSMUSG00000057899	Gpr111	PGR20	G protein-coupled receptor 111	protein-coding
common_peak2-22495-21-23--0.0154732354549205-0.305650498375555	chr13	51645229	51645974	+	0	NA	intron (NM_009167, intron 1 of 11)	intron (NM_009167, intron 1 of 11)	16852	NM_009167	20418	Mm.131870	NM_009167	ENSMUSG00000021448	Shc3	N-Shc|Rai|ShcC	src homology 2 domain-containing transforming protein C3	protein-coding
common_peak2-26010-15-17--0.157760250886656-0.307611222530528	chr19	55874629	55875257	+	0	NA	intron (NM_001142920, intron 4 of 11)	intron (NM_001142920, intron 4 of 11)	58643	NM_001142923	21416	Mm.139815	NM_009333	ENSMUSG00000024985	Tcf7l2	TCF4B|TCF4E|Tcf-4|Tcf4|mTcf-4B|mTcf-4E	transcription factor 7 like 2, T cell specific, HMG box	protein-coding
common_peak2-27110-9-21--1.26981821223308-1.37307999835977	chr3	10088037	10088366	+	0	NA	promoter-TSS (NR_045710)	promoter-TSS (NR_045710)	-76	NR_045710	100041480	Mm.455632	NR_045710	ENSMUSG00000049230	Gm9833	ENSMUSG00000049230	myelin basic protein expression factor 2, repressor pseudogene	pseudo
unique_peak2-36197-6-10--0.894033508256995-1.21398586181642	chr2	32555325	32555891	+	0	NA	Intergenic	Intergenic	-5913	NM_010236	14287	Mm.3830	NM_010236	ENSMUSG00000009566	Fpgs	AA408187	folylpolyglutamyl synthetase	protein-coding
unique_peak2-38005-1-5--2.2120195109379-1.32905871926422	chr6	30174353	30174727	+	0	NA	intron (NM_001169576, intron 3 of 4)	intron (NM_001169576, intron 3 of 4)	19263	NM_001169577	22214	Mm.332967	NM_009459	ENSMUSG00000039159	Ube2h	1500009C23Rik|AI181839|AI326965|AI462483|AW227540|E2-20K|Gid3|N28148|Ubc8	ubiquitin-conjugating enzyme E2H	protein-coding
unique_peak1-4465-8-2-1.42025991722641-1.65811743852845	chr2	180231119	180231557	+	0	NA	Intergenic	Intergenic	-3343	NM_018766	18216	Mm.301712	NM_018766	ENSMUSG00000027568	Ntsr1	NT-1R|NTR-1|NTR1	neurotensin receptor 1	protein-coding
common_peak1-10181-8-11--0.579740082773585-1.14218153353838	chr13	41249751	41250290	+	0	NA	Intergenic	Intergenic	-44663	NM_008104	107889	Mm.1399	NM_008104	ENSMUSG00000021362	Gcm2	Gcm-rs1|Gcm1|Gcm1-rs2	glial cells missing homolog 2 (Drosophila)	protein-coding
common_peak1-14588-27-66--1.07454323956254-2.91651320486995	chr3	41564875	41566186	+	0	NA	Intergenic	RSINE1|SINE|B4	18990	NM_027271	73852	Mm.29006	NM_027271	ENSMUSG00000025766	D3Ertd751e	2810009O15Rik|4930415G15Rik	DNA segment, Chr 3, ERATO Doi 751, expressed	protein-coding
unique_peak1-6196-7-0-2.79909083029819-2.40823996531185	chr6	148372187	148372712	+	0	NA	intron (NM_198967, intron 2 of 19)	intron (NM_198967, intron 2 of 19)	20425	NM_198967	387314	Mm.137858	NM_198967	ENSMUSG00000030306	Tmtc1	Arg99|BC023818	transmembrane and tetratricopeptide repeat containing 1	protein-coding
common_peak1-17895-39-74--0.613057443576727-1.41214593677719	chr7	119895538	119896338	+	0	NA	intron (NM_001166584, intron 1 of 13)	intron (NM_001166584, intron 1 of 13)	-6960	NM_001166585	21676	Mm.24685	NM_009346	ENSMUSG00000055320	Tead1	2610024B07Rik|B230114H05Rik|Gtrgeo5|TEAD-1|TEF-1|Tcf13|mTEF-1	TEA domain family member 1	protein-coding
unique_peak2-32560-2-4--1.23938235115068-0.931118710592187	chr1	77468015	77468441	+	0	NA	intron (NM_007936, intron 3 of 17)	intron (NM_007936, intron 3 of 17)	25115	NR_105770	102465180		NR_105770		Mir6352	mmu-mir-6352	microRNA mir-6352	ncRNA
unique_peak2-34329-3-6--1.22133801201688-1.08602067057793	chr13	97682338	97682772	+	0	NA	Intergenic	ORR1B1|LTR|MaLR	-12089	NM_001166065	218476	Mm.483490	NM_001166065	ENSMUSG00000091387	Gcnt4	C2gnt3|Gm279|Gm73	glucosaminyl (N-acetyl) transferase 4, core 2 (beta-1,6-N-acetylglucosaminyltransferase)	protein-coding
common_peak1-18023-35-55--0.3759846635951-0.620905664975282	chr7	142084013	142085082	+	0	NA	intron (NM_001143802, intron 3 of 3)	intron (NM_001143802, intron 3 of 3)	45566	NM_001143802	627214	Mm.323610	NM_001143802	ENSMUSG00000073805	Fam196a	B830028B13Rik	family with sequence similarity 196, member A	protein-coding
common_peak2-24240-39-46-0.061172395241516-0.321605260051241	chr16	90819868	90821335	+	0	NA	Intergenic	Intergenic	-9943	NM_029497	207932	Mm.328688	NM_029497	ENSMUSG00000039929	Urb1	4921511H13Rik|5730405K23Rik|AA670781|AI645590|mKIAA0539	URB1 ribosome biogenesis 1 homolog (S. cerevisiae)	protein-coding
unique_peak2-33400-9-33--1.89784943484612-3.46696221776358	chr11	53430161	53430918	+	0	NA	intron (NM_021283, intron 2 of 3)	(TA)n|Simple_repeat|Simple_repeat	301	NR_027491	16189	Mm.276360	NM_021283	ENSMUSG00000000869	Il4	BSF-1|Il-4	interleukin 4	protein-coding
common_peak2-31663-20-15-0.488074784591193-0.590343908676236	chr8	126663352	126663958	+	0	NA	Intergenic	Intergenic	-91639	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
unique_peak2-34633-6-7--0.434601889619698-0.97990265578305	chr14	79503820	79504249	+	0	NA	intron (NM_027906, intron 37 of 44)	intron (NM_027906, intron 37 of 44)	143140	NM_001033215	105590	Mm.486536	NM_001033215	ENSMUSG00000071262	Zfp957	AU017455	zinc finger protein 957	protein-coding
unique_peak1-1071-15-6-1.20480982849805-1.32521814697968	chr11	84362619	84363293	+	0	NA	Intergenic	Intergenic	23794	NR_038057	78365	Mm.260345	NR_038057	ENSMUSG00000087211	Lhx1os	1500016L03Rik|Lhx1as	LIM homeobox 1, opposite strand	ncRNA
common_peak1-15211-33-42--0.0949271921765691-0.311623594475992	chr4	116767958	116769458	+	0	NA	promoter-TSS (NM_008958)	promoter-TSS (NM_008958)	-253	NM_008958	19207	Mm.287037	NM_008958	ENSMUSG00000028681	Ptch2	ptc2	patched homolog 2	protein-coding
unique_peak1-1598-14-4-1.57728806547028-2.4322161449009	chr13	36725024	36725714	+	0	NA	Intergenic	RMER13B|LTR|ERVK	100977	NM_153529	68404	Mm.232930	NM_153529	ENSMUSG00000039114	Nrn1	0710008J23Rik|Cpg15|Nrn	neuritin 1	protein-coding
common_peak1-10141-13-25--0.921967687503323-0.983972868822056	chr13	34129866	34130565	+	0	NA	intron (NM_026512, intron 1 of 6)	intron (NM_026512, intron 1 of 6)	705	NM_026512	68021	Mm.140243	NM_026512	ENSMUSG00000038286	Bphl	2010012D11Rik|5730533B08Rik|AI115341	biphenyl hydrolase-like (serine hydrolase, breast epithelial mucin-associated antigen)	protein-coding
unique_peak2-33906-2-8--2.08737925770563-1.65811743852845	chr12	56536145	56536567	+	0	NA	Intergenic	Intergenic	36544	NM_011968	26443	Mm.30210	NM_011968	ENSMUSG00000021024	Psma6	IOTA	proteasome (prosome, macropain) subunit, alpha type 6	protein-coding
common_peak1-10586-74-131--0.328507542379846-0.924292404666925	chr14	29967360	29969189	+	0	NA	intron (NM_009785, intron 13 of 37)	intron (NM_009785, intron 13 of 37)	136880	NM_176920	319476	Mm.95780	NM_176920	ENSMUSG00000045776	Lrtm1	A930016D02Rik	leucine-rich repeats and transmembrane domains 1	protein-coding
unique_peak2-36349-2-5--1.50241675698448-1.08602067057793	chr2	92809116	92809478	+	0	NA	Intergenic	Intergenic	54039	NM_030725	80976	Mm.33490	NM_030725	ENSMUSG00000027220	Syt13	5730409J20Rik|AI549909|mKIAA1427	synaptotagmin XIII	protein-coding
common_peak2-30692-12-10-0.189344366450341-0.386243247519795	chr7	110221715	110222177	+	0	NA	Intergenic	IAPEY3-int|LTR|ERVK	-12088	NM_147054	259056	Mm.377813	NM_147054	ENSMUSG00000073959	Olfr584	MOR30-2	olfactory receptor 584	protein-coding
unique_peak1-5902-8-3-1.00522241794757-1.39487600375387	chr6	87590309	87590820	+	0	NA	intron (NM_024251, intron 8 of 9)	L1MA4A|LINE|L1	31598	NM_024251	72103	Mm.31770	NM_024251	ENSMUSG00000030051	Aplf	2010301N04Rik|AI452191	aprataxin and PNKP like factor	protein-coding
unique_peak1-1827-8-5-0.420259917226415-1.10484139239135	chr14	34142830	34143378	+	0	NA	intron (NM_153800, intron 4 of 10)	intron (NM_153800, intron 4 of 10)	113095	NM_153800	239027	Mm.318350	NM_153800	ENSMUSG00000063506	Arhgap22	B230341L19Rik|RHOGAP2|p68RacGAP	Rho GTPase activating protein 22	protein-coding
unique_peak2-39731-1-6--2.43441193227435-1.56314192529759	chr9	122255327	122255725	+	0	NA	Intergenic	Intergenic	-5208	NM_026179	67469	Mm.280254	NM_026179	ENSMUSG00000032540	Abhd5	1300003D03Rik|2010002J10Rik|CDS|CGI-58|IECN5|NCIE2	abhydrolase domain containing 5	protein-coding
common_peak2-21529-12-17--0.521149016354673-0.417187467413082	chr11	95096805	95097547	+	0	NA	Intergenic	Intergenic	-25667	NM_053093	93670	Mm.40085	NM_053093	ENSMUSG00000020872	Tac4	AW489379|PPT-C	tachykinin 4	protein-coding
unique_peak1-3117-18-2-2.7279566505072-4.01305082679061	chr18	33764870	33765614	+	0	NA	Intergenic	Intergenic	141425	NR_045415	433171	Mm.353332	NR_045415		Gm10549	ENSMUSG00000073610	predicted gene 10549	ncRNA
unique_peak1-7019-9-5-0.604650905683064-1.21398586181642	chr8	125734378	125734883	+	0	NA	intron (NM_145606, intron 1 of 6)	intron (NM_145606, intron 1 of 6)	2058	NM_145606	234852	Mm.41596	NM_145606	ENSMUSG00000000743	Chmp1a	2900018H07Rik|Pcoln3	charged multivesicular body protein 1A	protein-coding
common_peak1-14243-12-9-0.326847890200276-0.459837087125828	chr2	154390386	154390980	+	0	NA	intron (NM_007891, intron 1 of 6)	ID_B1|SINE|B4	4479	NM_001291105	13555	Mm.18036	NM_007891	ENSMUSG00000027490	E2f1	E2F-1|mKIAA4009	E2F transcription factor 1	protein-coding
common_peak1-8075-136-140-0.630755322117193-4.02108550561935	chr1	178317593	178319507	+	0	NA	Intergenic	L1Md_F3|LINE|L1	-113107	NM_176916	319455	Mm.338001	NM_176916	ENSMUSG00000055214	Pld5	B230365F16Rik	phospholipase D family, member 5	protein-coding
common_peak1-8032-18-23--0.272043349492805-0.34651636097721	chr1	171102347	171102819	+	0	NA	Intergenic	Intergenic	359012	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
common_peak2-26564-9-8-0.0196884049619079-1.03275496310833	chr2	103073021	103073476	+	0	NA	Intergenic	Intergenic	70105	NM_007914	13661	Mm.10724	NM_007914	ENSMUSG00000012350	Ehf	9030625L19Rik|AU019492	ets homologous factor	protein-coding
unique_peak2-33379-3-6--1.22133801201688-1.08602067057793	chr11	44520371	44520786	+	0	NA	intron (NM_001290710, intron 6 of 14)	intron (NM_001290710, intron 6 of 14)	88976	NM_001290710	13591	Mm.439662	NM_007897		Ebf1	Ebf|O/E-1|OE-1|Olf-1|Olf1	early B cell factor 1	protein-coding
common_peak1-13175-20-21-0.0286431659538957-0.306080386793804	chr19	12501046	12501889	+	0	NA	promoter-TSS (NM_019540)	promoter-TSS (NM_019540)	-928	NM_019540	56093	Mm.285849	NM_019540	ENSMUSG00000040065	Pfpl	Epcs5|Epcs50	pore forming protein-like	protein-coding
common_peak1-19415-158-253-0.0422519777044279-0.335184989656077	chrX	73965918	73968164	+	0	NA	Intergenic	L1VL1|LINE|L1	-118778	NM_001201395	74987	Mm.107996	NM_001201395	ENSMUSG00000079525	4930468A15Rik	-	RIKEN cDNA 4930468A15 gene	protein-coding
unique_peak2-35782-4-6--0.830815435910851-0.989110657569874	chr18	54901166	54901568	+	0	NA	Intergenic	Intergenic	129969	NR_045400	328957	Mm.402781	NR_045400		9330117O12Rik	9330117O12	RIKEN cDNA 9330117O12 gene	ncRNA
unique_peak1-2483-8-7-0.00522241794757061-1.00793137938329	chr16	5222038	5222532	+	0	NA	exon (NM_001033220, exon 1 of 8)	exon (NM_001033220, exon 1 of 8)	107	NM_001033220	239691	Mm.325639	NM_001033220	ENSMUSG00000051669	AU021092	-	expressed sequence AU021092	protein-coding
common_peak2-21179-16-19--0.203664452619301-0.325169893479371	chr11	59948006	59948642	+	0	NA	intron (NM_009021, intron 1 of 5)	intron (NM_009021, intron 1 of 5)	-5260	NM_001037764	19377	Mm.296366	NM_009021	ENSMUSG00000062115	Rai1	Gt1	retinoic acid induced 1	protein-coding
common_peak1-10250-16-12-0.417823924126969-0.489164546851866	chr13	54693140	54693918	+	0	NA	TTS (NM_028870)	TTS (NM_028870)	1937	NM_025933	67044	Mm.29353	NM_025933	ENSMUSG00000025868	Higd2a	2010110M21Rik|AA690237	HIG1 domain family, member 2A	protein-coding
unique_peak2-37332-8-14--0.901668177660948-0.660903317613906	chr4	130175183	130175873	+	0	NA	Intergenic	Intergenic	-43746	NM_030722	80912	Mm.440206	NM_030722	ENSMUSG00000028580	Pum1	AA517475|Pumm|mKIAA0099	pumilio RNA-binding family member 1	protein-coding
common_peak1-14965-19-13-0.595332404604082-0.713635438203849	chr3	105055149	105055887	+	0	NA	Intergenic	L1Md_F2|LINE|L1	185756	NM_029228	75269	Mm.307994	NM_029228	ENSMUSG00000051788	4930564D02Rik	-	RIKEN cDNA 4930564D02 gene	protein-coding
unique_peak2-39695-1-5--2.2120195109379-1.32905871926422	chr9	110790999	110791413	+	0	NA	exon (NM_001146059, exon 10 of 27)	exon (NM_001146059, exon 10 of 27)	8380	NM_001146060	235633	Mm.86338	NM_146228	ENSMUSG00000044037	Als2cl	79H19D|79H19E|BC022645|D930044G19Rik|mRn.49018	ALS2 C-terminal like	protein-coding
common_peak2-21129-11-7-0.508693584251613-1.21681515183528	chr11	54059704	54060095	+	0	NA	TTS (NM_009969)	TTS (NM_009969)	3502	NM_009969	12981	Mm.4922	NM_009969		Csf2	Csfgm|GMCSF|Gm-CSf|MGI-IGM	colony stimulating factor 2 (granulocyte-macrophage)	protein-coding
unique_peak2-39622-3-7--1.41398308995928-1.23214870625617	chr9	94691387	94691836	+	0	NA	intron (NM_177909, intron 4 of 15)	intron (NM_177909, intron 4 of 15)	39363	NR_106116	102465763		NR_106116		Mir7656	mmu-mir-7656	microRNA mir-7656	ncRNA
common_peak1-19417-9-15--0.81038659359578-0.630231561310125	chrX	74244899	74245358	+	0	NA	Intergenic	Intergenic	-396865	NM_001201395	74987	Mm.107996	NM_001201395	ENSMUSG00000079525	4930468A15Rik	-	RIKEN cDNA 4930468A15 gene	protein-coding
common_peak2-21870-19-9-1.08075923177432-1.37307999835977	chr12	69451472	69451910	+	0	NA	Intergenic	L1M5|LINE|L1	-681433	NR_033146	100316870	Mm.379794	NR_033146		Gm17821	-	DDB1 and CUL4 associated factor 5 pseudogene	pseudo
unique_peak2-32784-8-13--0.802132504110034-0.562038191119711	chr1	180330438	180331033	+	0	NA	Intergenic	Lx2|LINE|L1	-5277	NM_026626	68226	Mm.252132	NM_026626	ENSMUSG00000026495	Efcab2	1700073K01Rik|D830011E08Rik	EF-hand calcium binding domain 2	protein-coding
common_peak1-15937-28-39--0.2689689750659-0.409729630423047	chr5	28070209	28071141	+	0	NA	exon (NM_018878, exon 20 of 21)	exon (NM_018878, exon 20 of 21)	47415	NM_018878	55982	Mm.277190	NM_018878	ENSMUSG00000002221	Paxip1	D5Ertd149e|PTIP	PAX interacting (with transcription-activation domain) protein 1	protein-coding
common_peak2-31651-10-4-1.03448725012141-1.5150158574804	chr8	126497692	126498083	+	0	NA	intron (NM_019552, intron 1 of 12)	B2_Mm1a|SINE|B2	9135	NM_019552	56199	Mm.274243	NM_019552	ENSMUSG00000031974	Abcb10	Abc-me|Abcb12	ATP-binding cassette, sub-family B (MDR/TAP), member 10	protein-coding
common_peak1-17489-12-10-0.189344366450341-0.386243247519795	chr7	25072267	25072935	+	0	NA	Intergenic	Intergenic	11967	NM_009561	22719	Mm.12832	NM_009561	ENSMUSG00000050605	Zfp61	-	zinc finger protein 61	protein-coding
common_peak2-22081-18-30--0.641277159158523-0.738267116931589	chr12	78225678	78226826	+	0	NA	Intergenic	MLT1J|LTR|MaLR	-112839	NM_001252614	53618	Mm.35628	NM_016893	ENSMUSG00000021065	Fut8	-	fucosyltransferase 8	protein-coding
common_peak1-13278-71-73-0.434990813091021-1.21981219304439	chr19	37820643	37823926	+	0	NA	Intergenic	L1Md_F2|LINE|L1	49986	NM_007811	13082	Mm.42230	NM_007811	ENSMUSG00000024987	Cyp26a1	Cyp26|P450RA|P450RAI|RAH	cytochrome P450, family 26, subfamily a, polypeptide 1	protein-coding
common_peak2-29298-24-16-0.705747061517378-1.02077663956384	chr5	144904737	144905546	+	0	NA	intron (NM_001081109, intron 4 of 13)	intron (NM_001081109, intron 4 of 13)	43836	NM_001081109	231876	Mm.288726	NM_001081109	ENSMUSG00000038970	Lmtk2	2900041G10Rik|A330101P12Rik|BREK|KPI-2|KPI2|aatyk2|cprk	lemur tyrosine kinase 2	protein-coding
unique_peak1-4341-7-3-0.799090830298189-1.23214870625617	chr2	153430645	153431085	+	0	NA	Intergenic	Intergenic	27652	NM_001195390	99311	Mm.294478	NM_133850	ENSMUSG00000056941	Commd7	2310010I22Rik|AW060956|mU3	COMM domain containing 7	protein-coding
common_peak2-23435-6-9--0.75652998450706-1.11707584880836	chr15	62138467	62138943	+	0	NA	Intergenic	Intergenic	-87699	NR_003523	67552	Mm.484027	NM_026230		H2afy3	4933432H23Rik	H2A histone family, member Y3	pseudo
common_peak1-9251-14-11-0.314253659636488-0.435191258261915	chr11	86652689	86653346	+	0	NA	Intergenic	Intergenic	-31855	NM_026191	67487	Mm.260627	NM_026191	ENSMUSG00000018425	Dhx40	2410016C14Rik|ARG147|DDX40|PAD	DEAH (Asp-Glu-Ala-His) box polypeptide 40	protein-coding
common_peak1-18050-9-11--0.395349094316936-0.344532117358383	chr7	144940079	144940564	+	0	NA	Intergenic	L1MEg|LINE|L1	310964	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
common_peak2-23032-44-46-0.267303982890898-0.556612435105728	chr14	65952919	65954360	+	0	NA	Intergenic	Intergenic	-23874	NM_199029	380912	Mm.270087	NM_199029	ENSMUSG00000034522	Zfp395	BC053701|Gm910	zinc finger protein 395	protein-coding
common_peak2-25005-20-24--0.155781405183531-0.319918318021793	chr18	12941277	12941931	+	0	NA	intron (NM_001252490, intron 4 of 13)	intron (NM_001252490, intron 4 of 13)	36812	NR_045524	64291	Mm.259470	NM_020573	ENSMUSG00000044252	Osbpl1a	G430090F17Rik|Gm753|ORP-1|Osbpl1b	oxysterol binding protein-like 1A	protein-coding
common_peak1-13162-58-25-1.59551021674941-6.6977226863907	chr19	10740476	10742685	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	10981	NM_021453	58803	Mm.34037	NM_021453	ENSMUSG00000024738	Pga5	1110035E17Rik|Pepf	pepsinogen 5, group I	protein-coding
unique_peak2-36508-4-5--0.608423014574403-0.909929411522249	chr2	157201599	157201851	+	0	NA	intron (NM_026968, intron 1 of 2)	RMER17C|LTR|ERVK	8395	NM_026968	69161	Mm.228619	NM_026968	ENSMUSG00000063019	Manbal	1810024K12Rik|AI836500	mannosidase, beta A, lysosomal-like	protein-coding
common_peak1-9451-69-47-1.01017994653758-4.15060805636577	chr11	103114866	103116214	+	0	NA	intron (NM_016896, intron 1 of 15)	intron (NM_016896, intron 1 of 15)	13175	NM_016896	53859	Mm.158981	NM_016896	ENSMUSG00000020941	Map3k14	Nik|aly	mitogen-activated protein kinase kinase kinase 14	protein-coding
common_peak2-26030-15-22--0.511397205501357-0.50761186003982	chr19	60811530	60812203	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-20024	NM_178421	332397	Mm.186390	NM_178421	ENSMUSG00000072437	Nanos1	-	nanos homolog 1 (Drosophila)	protein-coding
common_peak2-23873-4-10--1.48289213249054-1.5150158574804	chr15	103221026	103221352	+	0	NA	Intergenic	B3|SINE|B2	-24010	NM_010577	16402	Mm.16234	NM_010577	ENSMUSG00000000555	Itga5	Cd49e|Fnra|VLA5	integrin alpha 5 (fibronectin receptor alpha)	protein-coding
common_peak2-24485-19-20-0.0103699038829257-0.306326795069978	chr17	24735887	24736535	+	0	NA	intron (NM_001286713, intron 35 of 41)	intron (NM_001286713, intron 35 of 41)	33361	NM_011647	22084	Mm.30435	NM_011647	ENSMUSG00000002496	Tsc2	Nafld|Tcs2	tuberous sclerosis 2	protein-coding
common_peak1-14191-13-17--0.391452970804544-0.364171515310935	chr2	146855678	146856408	+	0	NA	intron (NM_011917, intron 13 of 29)	intron (NM_011917, intron 13 of 29)	17247	NM_011917	24128	Mm.3065	NM_011917	ENSMUSG00000027433	Xrn2	-	5'-3' exoribonuclease 2	protein-coding
common_peak2-30919-7-8--0.370834171144123-1.00793137938329	chr7	144756121	144756577	+	0	NA	Intergenic	Intergenic	126992	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
common_peak1-15827-29-30-0.158093770228236-0.384630725886669	chr5	123142009	123142965	+	0	NA	Intergenic	ORR1B1|LTR|MaLR	-15079	NM_011026	18438	Mm.290884	NM_011026	ENSMUSG00000029470	P2rx4	AI504491|AW555605|D5Ertd444e|P2X4	purinergic receptor P2X, ligand-gated ion channel 4	protein-coding
common_peak2-24031-16-20--0.274053780510699-0.353907621462756	chr16	23272596	23273337	+	0	NA	intron (NM_145933, intron 2 of 7)	intron (NM_145933, intron 2 of 7)	-17577	NM_001252506	20440	Mm.149029	NM_145933	ENSMUSG00000022885	St6gal1	AW742324|Siat1|St6Gal-I|St6gal|St6galI	beta galactoside alpha 2,6 sialyltransferase 1	protein-coding
common_peak2-27318-7-4-0.477162735410827-1.09384600808989	chr3	65824149	65824386	+	0	NA	Intergenic	MTC|LTR|MaLR	-62120	NM_019937	56706	Mm.175612	NM_019937	ENSMUSG00000027829	Ccnl1	2610030E23Rik|AU018493|Ccnl|ania-6a	cyclin L1	protein-coding
unique_peak2-33348-4-6--0.830815435910851-0.989110657569874	chr11	29246918	29247341	+	0	NA	Intergenic	Intergenic	-27043	NM_176841	108686	Mm.338284	NM_176841	ENSMUSG00000032740	Ccdc88a	A430106J12Rik|AI848406|Ape|C130096N06Rik|C330012F17Rik|D130005J21Rik|Girdin|Giv|Grdn|Hkrp1	coiled coil domain containing 88A	protein-coding
unique_peak2-33556-2-7--1.91745425626332-1.45399745587252	chr11	80820032	80820406	+	0	NA	intron (NM_001034013, intron 1 of 9)	intron (NM_001034013, intron 1 of 9)	146186	NM_007384	11418	Mm.234998	NM_007384	ENSMUSG00000020704	Asic2	ACIC2|Accn1|BNC1|BNaC1|BNaC1a|Mdeg	acid-sensing (proton-gated) ion channel 2	protein-coding
common_peak1-8548-12-8-0.478850983645327-0.562038191119709	chr10	93340900	93341451	+	0	NA	intron (NM_019648, intron 5 of 11)	intron (NM_019648, intron 5 of 11)	12772	NM_019648	56307	Mm.289329	NM_019648	ENSMUSG00000036112	Metap2	4930584B20Rik|A930035J23Rik|AI047573|AL024412|AU014659|Amp2|Mnpep|p67|p67eIF2	methionine aminopeptidase 2	protein-coding
common_peak2-28247-10-33--1.73104749624157-3.11713623526324	chr4	123917522	123918112	+	0	NA	Intergenic	MTC|LTR|MaLR	245385	NR_040774	78460	Mm.452060	NR_040774		1700057H15Rik	-	RIKEN cDNA 1700057H15 gene	ncRNA
common_peak2-22873-15-13-0.204809828498052-0.368541233333383	chr14	30825419	30826176	+	0	NA	intron (NM_001136240, intron 1 of 7)	intron (NM_001136240, intron 1 of 7)	3611	NM_001136240	218865	Mm.259916	NM_172264	ENSMUSG00000015970	Chdh	AU041472|D630034H06Rik	choline dehydrogenase	protein-coding
common_peak1-10797-10-7-0.356415345008769-1.12966497611638	chr14	76776249	76776837	+	0	NA	Intergenic	Intergenic	-39085	NM_207652	21807	Mm.153272	NM_009366	ENSMUSG00000022010	Tsc22d1	AA589566|AW105905|Egr5|TSC-22|Tgfb1i4|Tsc|Tsc22	TSC22 domain family, member 1	protein-coding
common_peak1-16852-24-10-1.33377828413042-2.22881803703862	chr6	54199817	54200919	+	0	NA	intron (NM_001163640, intron 6 of 12)	MLT1D|LTR|MaLR	-22448	NM_023543	69993	Mm.321147	NM_023543	ENSMUSG00000004633	Chn2	1700026N20Rik|4930557O16Rik|ARHGAP3|Bch	chimerin 2	protein-coding
unique_peak2-32440-17-12-0.517856620063946-0.647240723060192	chr1	58359252	58360159	+	0	NA	intron (NM_001008419, intron 12 of 35)	URR1B|DNA|MER1_type	24535	NM_001008419	213043	Mm.414292	NM_001008419	ENSMUSG00000079554	Aox2	Aoh3|Aox3l1	aldehyde oxidase 2	protein-coding
common_peak2-22962-23-33--0.365695336741259-0.481798116163913	chr14	52304438	52305697	+	0	NA	Intergenic	Lx2|LINE|L1	31740	NM_001034102	545047	Mm.425915	NM_001034102	ENSMUSG00000068506	Gm5800	EG545047	predicted gene 5800	protein-coding
unique_peak2-35595-0-5--3.42509343119537-1.32905871926422	chr17	78404885	78405159	+	0	NA	Intergenic	Intergenic	-194566	NM_015800	50766	Mm.311912	NM_015800	ENSMUSG00000024074	Crim1	AU015004	cysteine rich transmembrane BMP regulator 1 (chordin like)	protein-coding
common_peak2-27426-35-39-0.109442163575141-0.343417008601348	chr3	89213366	89214599	+	0	NA	intron (NM_177041, intron 2 of 7)	B3A|SINE|B2	1803	NM_177041	319945	Mm.258142	NM_177041	ENSMUSG00000042642	Flad1	A930017E24Rik|Pp591	RFad1, flavin adenine dinucleotide synthetase, homolog (yeast)	protein-coding
common_peak1-13009-18-14-0.406028555619833-0.532159081577619	chr19	4878549	4879259	+	0	NA	promoter-TSS (NM_013456)	promoter-TSS (NM_013456)	214	NM_001168517	70605	Mm.36885	NM_027476	ENSMUSG00000006463	Zdhhc24	5730496N17Rik|Leng4	zinc finger, DHHC domain containing 24	protein-coding
common_peak2-26868-27-25-0.291106232754144-0.488172498216822	chr2	155956168	155957035	+	0	NA	intron (NM_010911, intron 7 of 12)	B2_Mm1t|SINE|B2	-13288	NM_001164216	67067	Mm.371623	NM_025946	ENSMUSG00000067847	Romo1	2010100O12Rik|AI853864	reactive oxygen species modulator 1	protein-coding
unique_peak2-37110-5-8--0.874305337448166-1.10484139239135	chr4	3199332	3199836	+	0	NA	Intergenic	B1_Mur4|SINE|Alu	-87132	NM_001167535	100312471	Mm.377218	NM_001167535	ENSMUSG00000095982	Vmn1r3	Gm11778|OTTMUSG00000004181	vomeronasal 1 receptor 3	protein-coding
common_peak1-10943-16-41--1.2740537805107-2.52371590646434	chr15	12824161	12824911	+	0	NA	intron (NM_001130149, intron 22 of 34)	intron (NM_001130149, intron 22 of 34)	69966	NM_001130149	14000	Mm.293142	NM_026799	ENSMUSG00000022191	Drosha	1110013A17Rik|AI874853|Etohi2|Rn3|Rnasen	drosha, ribonuclease type III	protein-coding
common_peak2-21320-5-7--0.704380336005853-1.01466476204226	chr11	75462562	75462850	+	0	NA	TTS (NM_008916)	TTS (NM_008916)	-2305	NM_008659	17913	Mm.234502	NM_008659	ENSMUSG00000017774	Myo1c	C80397|MMIb|MYO1E|NMI|mm1beta|myr2	myosin IC	protein-coding
common_peak1-14546-33-61--0.622858747861346-1.25612039445446	chr3	32510428	32511234	+	0	NA	intron (NM_013531, intron 1 of 9)	intron (NM_013531, intron 1 of 9)	4626	NM_013531	14696	Mm.139192	NM_013531	ENSMUSG00000027669	Gnb4	6720453A21Rik|G(beta)4	guanine nucleotide binding protein (G protein), beta 4	protein-coding
common_peak1-19473-14-11-0.314253659636488-0.435191258261915	chrX	134585728	134586539	+	0	NA	intron (NM_030688, intron 2 of 10)	intron (NM_030688, intron 2 of 10)	157986	NM_026469	67944	Mm.443280	NM_026469	ENSMUSG00000071686	Tex13a	1700025D03Rik	testis expressed 13A	protein-coding
unique_peak2-38637-5-16--1.79184317725619-1.61682445937017	chr7	83982361	83983165	+	0	NA	intron (NM_001199224, intron 21 of 22)	L1Md_A|LINE|L1	607990	NM_001199224	244071	Mm.322829	NM_172902	ENSMUSG00000025754	Agbl1	Ccp4|D430020F16|EG244071|Nna1-l1	ATP/GTP binding protein-like 1	protein-coding
unique_peak1-6607-10-3-1.35641534500877-1.75805390616669	chr8	91504437	91505006	+	0	NA	Intergenic	Intergenic	-43913	NR_106190	102465899		NR_106190	miRBase:MI0026042	Mir8110	mmu-mir-8110	microRNA mir-8110	ncRNA
unique_peak2-39907-4-10--1.48289213249054-1.5150158574804	chrX	96107853	96108320	+	0	NA	Intergenic	PB1D7|SINE|Alu	-21762	NM_052976	94190	Mm.254336	NM_052976		Ophn1	C130037N19Rik	oligophrenin 1	protein-coding
unique_peak2-32606-1-6--2.43441193227435-1.56314192529759	chr1	93184334	93184754	+	0	NA	Intergenic	Intergenic	-10371	NM_016717	50880	Mm.25724	NM_016717	ENSMUSG00000026307	Scly	9830169H08|A930015N15Rik|SCL|Scly1|Scly2	selenocysteine lyase	protein-coding
unique_peak2-35536-6-15--1.4346018896197-1.16633110333236	chr17	56289551	56290271	+	0	NA	Intergenic	Intergenic	-10145	NM_001130456	20359	Mm.8029	NM_013662	ENSMUSG00000001227	Sema6b	Sema|Seman|VIb|semaZ	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B	protein-coding
common_peak2-29149-8-7-0.00522241794757061-1.00793137938329	chr5	127632079	127632467	+	0	NA	Intergenic	Intergenic	-18662	NR_045371	75916	Mm.394659	NR_045371		4930572K03Rik	-	RIKEN cDNA 4930572K03 gene	ncRNA
common_peak1-9622-58-71-0.126024933448185-0.393723457908232	chr11	121353573	121354879	+	0	NA	intron (NM_029878, intron 8 of 38)	intron (NM_029878, intron 8 of 38)	26430	NM_178763	319530	Mm.11395	NM_178763	ENSMUSG00000039238	Zfp750	A030007D23Rik|Znf750	zinc finger protein 750	protein-coding
common_peak1-14783-12-20--0.743541437691122-0.625923329873571	chr3	89337500	89338027	+	0	NA	intron (NM_080466, intron 1 of 7)	B1_Mus1|SINE|Alu	13677	NM_080466	140493	Mm.120250	NM_080466		Kcnn3	KCa2.3|SK3|SKCA3	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	protein-coding
unique_peak1-5885-11-5-0.923731083530457-1.477227296591	chr6	86610518	86611046	+	0	NA	intron (NM_010751, intron 3 of 5)	intron (NM_010751, intron 3 of 5)	8371	NM_010751	17119	Mm.279580	NM_010751	ENSMUSG00000001156	Mxd1	AW122478|Mad|Mad1	MAX dimerization protein 1	protein-coding
common_peak1-14777-14-12-0.198776442216552-0.373562084705529	chr3	88913921	88914543	+	0	NA	Intergenic	Intergenic	-8343	NM_001253751	110196	Mm.39472	NM_134469	ENSMUSG00000059743	Fdps	6030492I17Rik|AI256750|Fdpsl1|mKIAA1293	farnesyl diphosphate synthetase	protein-coding
unique_peak2-33380-2-8--2.08737925770563-1.65811743852845	chr11	44812087	44812608	+	0	NA	intron (NM_001290710, intron 14 of 14)	MTC|LTR|MaLR	118083	NR_045100	100504255	Mm.123608	NR_045100	ENSMUSG00000084773	Gm12159	OTTMUSG00000005475	predicted gene 12159	ncRNA
common_peak2-20659-40-62--0.318304240748819-0.533919121953929	chr10	82763293	82764201	+	0	NA	intron (NM_177388, intron 5 of 10)	intron (NM_177388, intron 5 of 10)	36815	NM_177388	338365	Mm.67073	NM_177388	ENSMUSG00000034591	Slc41a2	A230035L05Rik|SLC41A1-L1	solute carrier family 41, member 2	protein-coding
common_peak1-15164-8-13--0.802132504110034-0.562038191119711	chr3	148987342	148987834	+	0	NA	Intergenic	Intergenic	49887	NR_040591	381482	Mm.393866	NR_040591		Gm1653	-	predicted gene 1653	ncRNA
unique_peak1-1369-13-0-3.77847203063777-4.51544993495972	chr12	35772867	35773328	+	0	NA	intron (NM_001014973, intron 5 of 25)	L1_Mus1|LINE|L1	41236	NM_001014973	217463	Mm.213991	NM_001014973	ENSMUSG00000020590	Snx13	Rgs-px1|mKIAA0713	sorting nexin 13	protein-coding
unique_peak1-4198-8-2-1.42025991722641-1.65811743852845	chr2	118491456	118491896	+	0	NA	intron (NM_001033254, intron 2 of 10)	intron (NM_001033254, intron 2 of 10)	2363	NM_001033254	214230	Mm.241857	NM_001033254	ENSMUSG00000074923	Pak6	4732456M09	p21 protein (Cdc42/Rac)-activated kinase 6	protein-coding
common_peak1-8123-14-34--1.23006685658732-1.94354392707378	chr1	185328811	185329471	+	0	NA	Intergenic	Intergenic	444222	NM_016928	53791	Mm.116894	NM_016928	ENSMUSG00000079164	Tlr5	-	toll-like receptor 5	protein-coding
common_peak2-24342-12-10-0.189344366450341-0.386243247519795	chr17	5137807	5138325	+	0	NA	intron (NM_001085355, intron 4 of 19)	intron (NM_001085355, intron 4 of 19)	142992	NM_001085355	239985	Mm.133401	NM_001085355	ENSMUSG00000069729	Arid1b	8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235	AT rich interactive domain 1B (SWI-like)	protein-coding
common_peak2-29771-11-15--0.491306415748387-0.435191258261915	chr6	87838194	87838755	+	0	NA	intron (NM_017477, intron 1 of 23)	intron (NM_017477, intron 1 of 23)	508	NM_201244	54161	Mm.258785	NM_017477	ENSMUSG00000030058	Copg1	AU019265|BC056168|Copg|D6Ertd71e|D6Wsu16e	coatomer protein complex, subunit gamma 1	protein-coding
common_peak2-28360-12-10-0.189344366450341-0.386243247519795	chr4	136449885	136450324	+	0	NA	Intergenic	Intergenic	-1275	NM_007574	12262	Mm.439732	NM_007574	ENSMUSG00000036896	C1qc	AI385742|C1qg|Ciqc	complement component 1, q subcomponent, C chain	protein-coding
unique_peak1-155-9-0-3.18961340640422-3.01029995663981	chr1	72945257	72945806	+	0	NA	Intergenic	Intergenic	-24092	NM_010518	16011	Mm.405761	NM_010518	ENSMUSG00000026185	Igfbp5	AI256729|AW208790|IGFBP-5|IGFBP-5P	insulin-like growth factor binding protein 5	protein-coding
common_peak1-14494-10-13--0.450939577048835-0.386243247519795	chr3	10350869	10351268	+	0	NA	intron (NM_025512, intron 1 of 7)	intron (NM_025512, intron 1 of 7)	233	NM_025512	66361	Mm.371617	NM_025512	ENSMUSG00000039795	Zfand1	2310008M20Rik|AW048890	zinc finger, AN1-type domain 1	protein-coding
common_peak2-31890-12-10-0.189344366450341-0.386243247519795	chr9	56417685	56418056	+	0	NA	Intergenic	L1MC1|LINE|L1	115190	NM_181074	235402	Mm.246605	NM_181074	ENSMUSG00000049556	Lingo1	4930471K13Rik|AV148400|LERN1|LINGO-1|Lrrn6a|UNQ201	leucine rich repeat and Ig domain containing 1	protein-coding
common_peak2-29627-4-11--1.6084230145744-1.68134727924692	chr6	55618971	55619391	+	0	NA	Intergenic	Intergenic	12076	NM_009717	11922	Mm.5106	NM_009717	ENSMUSG00000037984	Neurod6	Atoh2|Math-2|Math2|Nex|Nex1m|bHLHa2	neurogenic differentiation 6	protein-coding
common_peak1-19381-33-33-0.24387472127519-0.447010559430123	chrX	38189523	38190769	+	0	NA	Intergenic	L1Md_T|LINE|L1	-564332	NM_016886	53623	Mm.327681	NM_016886	ENSMUSG00000001986	Gria3	2900064I19Rik|GluA3|GluR-C|GluR-K3|Glur-3|Glur3|Gluralpha3	glutamate receptor, ionotropic, AMPA3 (alpha 3)	protein-coding
common_peak2-32405-14-21--0.560215458279653-0.519193887192484	chrX	151047079	151048096	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-33714	NM_001037167	434881	Mm.357614	NM_001037167	ENSMUSG00000072888	Samt2	EG434881|Gm5647	spermatogenesis associated multipass transmembrane protein 2	protein-coding
unique_peak2-33272-4-10--1.48289213249054-1.5150158574804	chr10	128748581	128749016	+	0	NA	Intergenic	Intergenic	-9883	NM_146284	258281	Mm.377412	NM_146284	ENSMUSG00000049573	Olfr780	MOR114-12	olfactory receptor 780	protein-coding
common_peak1-17916-11-22--1.0148683718054-1.11267835143409	chr7	126428418	126429217	+	0	NA	Intergenic	MIR|SINE|MIR	-100929	NM_001024138	209776	Mm.300632	NM_001024138	ENSMUSG00000066197	Gpr139	GPRg1|Gm495|PGR3	G protein-coupled receptor 139	protein-coding
unique_peak1-401-17-5-1.63333383748388-2.19184853030482	chr1	155088923	155089751	+	0	NA	intron (NM_010683, intron 15 of 27)	intron (NM_010683, intron 15 of 27)	-55760	NM_008485	16782	Mm.329272	NM_008485	ENSMUSG00000026479	Lamc2	AA589349	laminin, gamma 2	protein-coding
common_peak1-11353-18-24--0.330937038546373-0.380101753845076	chr15	89177168	89177904	+	0	NA	Intergenic	MLT1D|LTR|MaLR	8554	NM_178919	105847	Mm.34511	NM_178919	ENSMUSG00000022614	Lmf2	AI451006|Tmem112b|Tmem153	lipase maturation factor 2	protein-coding
common_peak1-9018-26-25-0.22745937401737-0.399869693390336	chr11	61266495	61267461	+	0	NA	exon (NM_009548, exon 3 of 15)	exon (NM_009548, exon 3 of 15)	516	NM_009548	22671	Mm.89201	NM_009548	ENSMUSG00000010086	Rnf112	ZNF179|Zfp179|bfp	ring finger protein 112	protein-coding
unique_peak2-38025-13-26--0.9764154715257-1.09492971584134	chr6	35132765	35133844	+	0	NA	intron (NM_027513, intron 1 of 42)	B3|SINE|B2	5688	NM_027513	70699	Mm.261208	NM_027513	ENSMUSG00000038759	Nup205	3830404O05Rik|AV248391|mKIAA0225	nucleoporin 205	protein-coding
unique_peak2-37037-2-7--1.91745425626332-1.45399745587252	chr3	131803520	131803886	+	0	NA	intron (NM_020265, intron 1 of 3)	intron (NM_020265, intron 1 of 3)	55447	NM_020265	56811	Mm.103593	NM_020265	ENSMUSG00000028031	Dkk2	-	dickkopf homolog 2 (Xenopus laevis)	protein-coding
common_peak2-24729-14-16--0.188246680892695-0.308035960714963	chr17	47438577	47439110	+	0	NA	intron (NM_172622, intron 2 of 16)	intron (NM_172622, intron 2 of 16)	-66993	NM_001146212	64657	Mm.216250	NM_183086	ENSMUSG00000034729	Mrps10	1110038B19Rik|AW743084|Rpms10	mitochondrial ribosomal protein S10	protein-coding
common_peak1-13283-24-27--0.0141450192898871-0.304978344874324	chr19	38024501	38025429	+	0	NA	intron (NM_001099634, intron 24 of 52)	RSINE1|SINE|B4	93102	NM_001099634	226101	Mm.34674	NM_177035	ENSMUSG00000048612	Myof	2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3	myoferlin	protein-coding
common_peak1-18688-18-9-0.990991056340989-1.23014042908325	chr8	120488986	120489877	+	0	NA	Intergenic	B3|SINE|B2	-163602	NM_026758	68533	Mm.181836	NM_026758	ENSMUSG00000031843	Mphosph6	1110001M01Rik|AA536809|C86426	M phase phosphoprotein 6	protein-coding
common_peak2-29010-14-26--0.855671341805824-0.949797625454538	chr5	110770043	110770645	+	0	NA	intron (NM_001164833, intron 7 of 11)	intron (NM_001164833, intron 7 of 11)	1710	NM_001164834	231602	Mm.55948	NM_153400	ENSMUSG00000029503	P2rx2	P2X2a|P2x2	purinergic receptor P2X, ligand-gated ion channel, 2	protein-coding
common_peak1-11090-25-15-0.861849905345106-1.28534286439186	chr15	59538037	59539220	+	0	NA	Intergenic	Intergenic	58419	NM_144549	211770	Mm.40298	NM_144549	ENSMUSG00000032501	Trib1	A530090O15Rik|TRB-1|Trb1	tribbles homolog 1 (Drosophila)	protein-coding
common_peak1-13142-50-29-1.13404972087043-3.5145787661347	chr19	10038247	10040096	+	0	NA	Intergenic	Intergenic	-15919	NR_073181	14319	Mm.1776	NM_010239	ENSMUSG00000024661	Fth1	FHC|Fth|HFt|MFH	ferritin heavy chain 1	protein-coding
unique_peak2-35918-5-8--0.874305337448166-1.10484139239135	chr19	5838755	5839151	+	0	NA	Intergenic	Intergenic	6525	NR_003513	66961	Mm.281895	NR_003513		Neat1	2310043N10Rik|VINC	nuclear paraspeckle assembly transcript 1 (non-protein coding)	ncRNA
common_peak2-27686-8-7-0.00522241794757061-1.00793137938329	chr3	117076842	117077322	+	0	NA	Intergenic	Intergenic	-13288	NM_177664	229791	Mm.140138	NM_177664	ENSMUSG00000044667	Lppr4	A330086D10|D3Bwg0562e|PRG-1|mKIAA0455	lipid phosphate phosphatase-related protein type 4	protein-coding
common_peak1-15668-9-10--0.269818212233077-1.05503135781948	chr4	136461801	136462305	+	0	NA	Intergenic	Intergenic	-7294	NM_007572	12259	Mm.439957	NM_007572	ENSMUSG00000036887	C1qa	AI255395|C1q	complement component 1, q subcomponent, alpha polypeptide	protein-coding
common_peak2-26389-37-23-0.941030570764663-1.99811292136509	chr2	51972362	51973335	+	0	NA	intron (NM_175238, intron 33 of 35)	intron (NM_175238, intron 33 of 35)	44491	NM_175238	51869	Mm.254530	NM_175238	ENSMUSG00000036202	Rif1	5730435J01Rik|6530403D07Rik|AU016181|AW549474|D2Ertd145e	Rap1 interacting factor 1 homolog (yeast)	protein-coding
common_peak1-8193-10-4-1.03448725012141-1.5150158574804	chr10	120635258	120635777	+	0	NA	Intergenic	RSINE1|SINE|B4	112728	NM_029057	74694	Mm.233833	NM_029057	ENSMUSG00000052302	Tbc1d30	4930505D03Rik	TBC1 domain family, member 30	protein-coding
common_peak2-26184-15-14-0.105274154947137-0.330004445983672	chr2	24949715	24950428	+	0	NA	intron (NM_172204, intron 1 of 11)	intron (NM_172204, intron 1 of 11)	654	NM_001163626	241275	Mm.218774	NM_172204	ENSMUSG00000036805	Noxa1	NY-CO-31|SDCCAG31	NADPH oxidase activator 1	protein-coding
common_peak1-11536-29-21-0.652858461977813-1.06916698217164	chr16	4718766	4719609	+	0	NA	5' UTR (NM_026393, exon 1 of 6)	5' UTR (NM_026393, exon 1 of 6)	169	NM_001290763	67824	Mm.28451	NM_026393	ENSMUSG00000063445	Nmral1	1110025F24Rik|AI256624	NmrA-like family domain containing 1	protein-coding
common_peak2-22634-63-47-0.853350090349434-2.93378073455177	chr13	90922842	90923806	+	0	NA	Intergenic	Intergenic	121636	NM_001145879	435376	Mm.292579	NM_001145879	ENSMUSG00000078958	Atp6ap1l	EG435376	ATPase, H+ transporting, lysosomal accessory protein 1-like	protein-coding
common_peak2-28217-19-32--0.641706792696767-0.800403172662453	chr4	118359693	118360639	+	0	NA	Intergenic	Intergenic	2889	NM_146713	258708	Mm.223142	NM_146713	ENSMUSG00000043383	Olfr1342	MOR258-3	olfactory receptor 1342	protein-coding
unique_peak1-5255-8-4-0.683294323060208-1.21878474469819	chr5	53995370	53995793	+	0	NA	intron (NM_001277116, intron 3 of 12)	Lx7|LINE|L1	13856	NM_001080927	19664	Mm.209292	NM_009035	ENSMUSG00000039191	Rbpj	AI843960|CBF1|Igkjrb|Igkrsbp|RBP-J|RBP-J kappa|RBPjk|Rbpsuh	recombination signal binding protein for immunoglobulin kappa J region	protein-coding
common_peak2-31623-20-13-0.680719862533589-0.809260849721102	chr8	123101749	123102371	+	0	NA	intron (NM_001145896, intron 15 of 15)	intron (NM_001145896, intron 15 of 15)	10915	NM_178856	272551	Mm.275910	NM_178856		Gins2	2210013I18Rik|4833427B12Rik|AI323585|Pfs2	GINS complex subunit 2 (Psf2 homolog)	protein-coding
common_peak2-31050-25-17-0.691924903902794-0.98872314135509	chr8	18727383	18728344	+	0	NA	intron (NM_007426, intron 1 of 8)	intron (NM_007426, intron 1 of 8)	13699	NM_007426	11601	Mm.439874	NM_007426	ENSMUSG00000031465	Angpt2	Agpt2|Ang-2|Ang2	angiopoietin 2	protein-coding
unique_peak1-1982-7-3-0.799090830298189-1.23214870625617	chr14	121826193	121826688	+	0	NA	Intergenic	Intergenic	-47988	NM_145465	223255	Mm.390756	NM_145465	ENSMUSG00000063410	Stk24	1810013H02Rik|C76483|MST-3|Mst3|STE20	serine/threonine kinase 24	protein-coding
common_peak2-27873-61-74-0.15393063925346-0.413122813965767	chr4	8535449	8536447	+	0	NA	Intergenic	Intergenic	73157	NM_021518	59021	Mm.397471	NM_021518	ENSMUSG00000047187	Rab2a	9330148M11Rik|C80220|Rab2	RAB2A, member RAS oncogene family	protein-coding
common_peak1-16747-62-97--0.203958385313124-0.47296350276559	chr6	31398525	31399718	+	0	NA	intron (NM_013791, intron 6 of 17)	intron (NM_013791, intron 6 of 17)	50293	NM_013791	27418	Mm.238038	NM_013791		Mkln1	A130067F06Rik|AU015903|BB154892	muskelin 1, intracellular mediator containing kelch motifs	protein-coding
common_peak2-29510-46-38-0.612593724386553-1.38266584732704	chr6	34597865	34599099	+	0	NA	Intergenic	Intergenic	-60962	NM_145575	109624	Mm.308134	NM_145575	ENSMUSG00000029761	Cald1	4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik	caldesmon 1	protein-coding
common_peak1-12557-12-28--1.20920501003993-1.52081014994907	chr18	9212066	9212718	+	0	NA	promoter-TSS (NM_008058)	promoter-TSS (NM_008058)	-462	NM_008058	14370	Mm.184289	NM_008058	ENSMUSG00000036904	Fzd8	Fz8	frizzled homolog 8 (Drosophila)	protein-coding
common_peak1-18954-17-15-0.218296338205038-0.403453972741633	chr9	50775299	50775961	+	0	NA	intron (NM_178710, intron 3 of 15)	intron (NM_178710, intron 3 of 15)	41548	NM_178710	235344	Mm.104932	NM_178710	ENSMUSG00000037112	Sik2	G630080D20Rik|Snf1lk2	salt inducible kinase 2	protein-coding
common_peak1-8671-23-33--0.365695336741259-0.481798116163913	chr10	128747413	128748541	+	0	NA	Intergenic	Intergenic	-10704	NM_146284	258281	Mm.377412	NM_146284	ENSMUSG00000049573	Olfr780	MOR114-12	olfactory receptor 780	protein-coding
unique_peak2-33972-9-20--1.20270401637454-1.23014042908325	chr12	84175522	84176247	+	0	NA	intron (NM_001282061, intron 12 of 16)	Tigger15a|DNA|TcMar	-135742	NR_046045	74283	Mm.398247	NR_046045		1700085C21Rik	-	RIKEN cDNA 1700085C21 gene	ncRNA
unique_peak2-35715-4-16--2.11092335510359-1.97518968347063	chr18	33921100	33921758	+	0	NA	Intergenic	Intergenic	-33117	NR_038152	69749	Mm.248787	NR_038151	ENSMUSG00000087590	2410004N09Rik	-	RIKEN cDNA 2410004N09 gene	ncRNA
common_peak2-32071-14-19--0.422711934529718-0.403453972741636	chr9	95637287	95638040	+	0	NA	intron (NM_011643, intron 2 of 12)	intron (NM_011643, intron 2 of 12)	13114	NM_011643	22063	Mm.149633	NM_011643	ENSMUSG00000032839	Trpc1	Mtrp1|Trp1|Trrp1	transient receptor potential cation channel, subfamily C, member 1	protein-coding
common_peak1-10315-16-18--0.129663871175524-0.307235046933848	chr13	67723702	67724436	+	0	NA	intron (NM_183146, intron 3 of 3)	RLTR12B|LTR|ERVK	-13425	NM_001163246	100416706	Mm.478045	NM_001163246	ENSMUSG00000058093	AA987161	AA987127	expressed sequence AA987161	protein-coding
common_peak2-25029-10-12--0.344024373132323-0.340565874754526	chr18	25244675	25245125	+	0	NA	intron (NM_001289654, intron 15 of 24)	intron (NM_001289654, intron 15 of 24)	79566	NM_001142697	66648	Mm.263189	NM_001004361	ENSMUSG00000024269	Tpgs2	5730437P09Rik|5730494M16Rik|AI666318|Pgs2	tubulin polyglutamylase complex subunit 2	protein-coding
unique_peak1-4436-7-3-0.799090830298189-1.23214870625617	chr2	169603234	169603738	+	0	NA	intron (NM_080455, intron 1 of 1)	intron (NM_080455, intron 1 of 1)	144340	NM_080455	228911	Mm.315789	NM_080455	ENSMUSG00000047907	Tshz2	2900073F20Rik|B830045G17|Mtsh2|Sdccag33l|Tsh2|Zfp218|mKIAA4248|teashirt2	teashirt zinc finger family member 2	protein-coding
common_peak1-17106-20-10-1.0286431659539-1.30248952876293	chr6	113623779	113624564	+	0	NA	intron (NM_172161, intron 6 of 12)	Cheshire|DNA|MER1_type	-23322	NM_001033463	381801	Mm.333322	NM_001033463	ENSMUSG00000056952	Tatdn2	AI646012|mKIAA0218	TatD DNase domain containing 2	protein-coding
common_peak1-15035-67-126--0.44427320398917-1.38494079641884	chr3	121646236	121648125	+	0	NA	Intergenic	Intergenic	-9064	NM_172525	214137	Mm.229287	NM_172525	ENSMUSG00000039831	Arhgap29	6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1	Rho GTPase activating protein 29	protein-coding
common_peak1-16542-108-134-0.293361364357239-1.00020716636849	chr5	143527195	143528820	+	0	NA	intron (NM_001122730, intron 10 of 18)	intron (NM_001122730, intron 10 of 18)	51059	NM_178242	231861	Mm.354649	NM_178242	ENSMUSG00000039477	Tnrc18	BC025631|EG381742|Zfp469	trinucleotide repeat containing 18	protein-coding
common_peak2-23295-100-77-0.951369555948541-5.61202877049787	chr15	31601015	31602466	+	0	NA	Intergenic	Intergenic	69869	NM_026546	68073	Mm.119185	NM_026546	ENSMUSG00000039065	Fam173b	A930016P21Rik|AA987072	family with sequence similarity 173, member B	protein-coding
common_peak1-8221-53-60-0.210235674853042-0.501837478813393	chr10	9528898	9530370	+	0	NA	intron (NM_001081344, intron 14 of 25)	Lx3A|LINE|L1	91204	NM_001081344	78808	Mm.331751	NM_030191	ENSMUSG00000019790	Stxbp5	0710001E20Rik|4930565N16Rik|AW742610|LGL3|mKIAA1006	syntaxin binding protein 5 (tomosyn)	protein-coding
common_peak1-15124-12-15--0.351224014912361-0.332077462497413	chr3	138443149	138443748	+	0	NA	intron (NR_121195, intron 1 of 7)	GA-rich|Low_complexity|Low_complexity	38276	NM_019571	56224	Mm.31927	NM_019571	ENSMUSG00000028152	Tspan5	2810455A09Rik|4930505M03Rik|NET-4|Tm4sf9	tetraspanin 5	protein-coding
common_peak2-28462-17-18--0.0296311752385474-0.306899554715732	chr4	151996190	151996929	+	0	NA	Intergenic	Intergenic	-75090	NR_033138	330004	Mm.291863	NM_001033414		Gm833	-	predicted gene 833	ncRNA
unique_peak1-1026-14-3-1.89921616035764-2.80787975886178	chr11	75594461	75595275	+	0	NA	intron (NM_007873, intron 3 of 8)	B1F2|SINE|Alu	14691	NM_007873	13447	Mm.5137	NM_007873	ENSMUSG00000020848	Doc2b	-	double C2, beta	protein-coding
unique_peak2-33772-6-13--1.2419568116773-1.58711810488664	chr11	118326974	118327641	+	0	NA	Intergenic	Intergenic	-10967	NM_172573	217364	Mm.473963	NM_172573	ENSMUSG00000033857	Engase	C130099A03|D230014K01Rik	endo-beta-N-acetylglucosaminidase	protein-coding
common_peak2-30020-9-7-0.18961340640422-1.05908390183068	chr6	125192752	125193336	+	0	NA	Intergenic	Intergenic	-5999	NM_001286753	21940	Mm.367714	NM_001033126	ENSMUSG00000030336	Cd27	S152|Tnfrsf7|Tp55	CD27 antigen	protein-coding
unique_peak1-2220-14-6-1.09186123830004-1.16633110333236	chr15	73570629	73571390	+	0	NA	intron (NM_001166388, intron 1 of 5)	intron (NM_001166388, intron 1 of 5)	-7447	NM_008975	19245	Mm.390807	NM_008975	ENSMUSG00000059895	Ptp4a3	AV088979|Prl-3|pPtp4a3	protein tyrosine phosphatase 4a3	protein-coding
common_peak1-17341-46-36-0.688542577619851-1.61783625824857	chr6	149141247	149142767	+	0	NA	Intergenic	Intergenic	-4773	NM_001113424	232566	Mm.209147	NM_001113424	ENSMUSG00000068250	Amn1	5830467E07Rik|A230083D09|C730024G19Rik	antagonist of mitotic exit network 1	protein-coding
unique_peak1-156-25-5-2.27688740462395-4.37015862955249	chr1	73026267	73027487	+	0	NA	Intergenic	Intergenic	35596	NM_009407	21958	Mm.425024	NM_009407	ENSMUSG00000026182	Tnp1	Stp-1|TP1|Tp-1	transition protein 1	protein-coding
common_peak2-29346-14-11-0.314253659636488-0.435191258261915	chr5	149031115	149031657	+	0	NA	intron (NM_029920, intron 5 of 14)	intron (NM_029920, intron 5 of 14)	180094	NM_007513	11987	Mm.275489	NM_007513	ENSMUSG00000041313	Slc7a1	4831426K01Rik|AI447493|Atrc-1|Atrc1|Cat1|Rec-1|Rev-1|mCAT-1	solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	protein-coding
unique_peak1-5764-8-4-0.683294323060208-1.21878474469819	chr6	51760593	51761092	+	0	NA	Intergenic	L1MC1|LINE|L1	201706	NM_018773	54353	Mm.221479	NM_018773	ENSMUSG00000059182	Skap2	2610021A10Rik|AA960083|BB137539|RA70|SKAP-HOM|Saps|Scap2|mSKAP55R	src family associated phosphoprotein 2	protein-coding
common_peak1-10419-41-51-0.000708986707568471-0.303138254425616	chr13	98814239	98815529	+	0	NA	intron (NM_012026, intron 6 of 35)	MTB|LTR|MaLR	161236	NM_012026	110596	Mm.252718	NM_012026	ENSMUSG00000021662	Arhgef28	9230110L08Rik|AI323540|D13Bwg1089e|RIP2|Rgnef|RhoGEF|Rhoip2|p190RhoGEF	Rho guanine nucleotide exchange factor (GEF) 28	protein-coding
unique_peak1-4670-8-2-1.42025991722641-1.65811743852845	chr3	93536510	93536955	+	0	NA	Intergenic	RMER3D-int|LTR|ERVK	-56527	NM_148949	207213	Mm.425165	NM_148949	ENSMUSG00000094084	Tdpoz1	2cpoz56|Mapp2|Spopl1	TD and POZ domain containing 1	protein-coding
common_peak1-10764-43-41-0.390245762744942-0.745957255300192	chr14	70442562	70443743	+	0	NA	intron (NM_028560, intron 4 of 6)	intron (NM_028560, intron 4 of 6)	-34100	NM_018781	13655	Mm.103737	NM_018781	ENSMUSG00000033730	Egr3	Pilot	early growth response 3	protein-coding
common_peak1-15643-31-32-0.18084455145467-0.379775532323848	chr4	134922547	134923416	+	0	NA	Intergenic	B3|SINE|B2	-13852	NM_001130477	51796	Mm.1963	NM_016799	ENSMUSG00000028809	Srrm1	AA407769|POP101|Srm160	serine/arginine repetitive matrix 1	protein-coding
common_peak1-17538-23-20-0.32945008173032-0.471456499375596	chr7	28951112	28952182	+	0	NA	Intergenic	RMER20A|LTR|ERVK	-3120	NM_007991	14113	Mm.4595	NM_007991	ENSMUSG00000046865	Fbl	AL022665|FIB|FLRN|RNU3IP1	fibrillarin	protein-coding
unique_peak1-6677-12-4-1.32684789020028-2.04196296489515	chr8	23257244	23257841	+	0	NA	intron (NM_011848, intron 9 of 15)	intron (NM_011848, intron 9 of 15)	15424	NM_001162947	23954	Mm.41413	NM_011848	ENSMUSG00000031478	Nek3	-	NIMA (never in mitosis gene a)-related expressed kinase 3	protein-coding
unique_peak2-36985-3-9--1.73591118484664-1.57096726280955	chr3	117855460	117855766	+	0	NA	Intergenic	Intergenic	-281162	NR_029551	387155		NR_029551		Mir137	Mirn137|mmu-mir-137	microRNA 137	ncRNA
unique_peak1-4372-11-2-1.92373108353046-2.32232533660526	chr2	157432161	157432668	+	0	NA	Intergenic	Intergenic	-40317	NM_016916	53619	Mm.480461	NM_016916	ENSMUSG00000067787	Blcap	AI462828|Bc10	bladder cancer associated protein homolog (human)	protein-coding
common_peak1-18097-11-15--0.491306415748387-0.435191258261915	chr8	120536920	120537439	+	0	NA	Intergenic	Intergenic	-211350	NM_026758	68533	Mm.181836	NM_026758	ENSMUSG00000031843	Mphosph6	1110001M01Rik|AA536809|C86426	M phase phosphoprotein 6	protein-coding
common_peak2-29522-143-133-0.791428908519666-6.20556362971495	chr6	35177268	35178477	+	0	NA	intron (NM_027513, intron 30 of 42)	intron (NM_027513, intron 30 of 42)	-24827	NR_015608	67705	Mm.228046	NR_015608	ENSMUSG00000073155	1810058I24Rik	AI414869|AI848234	RIKEN cDNA 1810058I24 gene	ncRNA
unique_peak1-4775-9-1-2.18961340640422-2.31132995230379	chr3	124429346	124429810	+	0	NA	Intergenic	Intergenic	-145569	NR_015460	384775	Mm.489851	NR_015460	ENSMUSG00000039174	1700003H04Rik	4930538K10Rik|4933400D22Rik	RIKEN cDNA 1700003H04 gene	ncRNA
common_peak2-19710-23-28--0.136213490618491-0.317118655902079	chr1	64617276	64617945	+	0	NA	intron (NM_133828, intron 5 of 7)	intron (NM_133828, intron 5 of 7)	38232	NM_001037726	12912	Mm.422634	NM_009952	ENSMUSG00000025958	Creb1	2310001E10Rik|3526402H21Rik|AV083133|Creb|Creb-1	cAMP responsive element binding protein 1	protein-coding
common_peak1-13451-57-71-0.0961080386366167-0.353864072814984	chr19	57360936	57362063	+	0	NA	Intergenic	ORR1A0|LTR|MaLR	13049	NR_045319	78120	Mm.445892	NR_045319		4930449E18Rik	-	RIKEN cDNA 4930449E18 gene	ncRNA
common_peak1-18512-22-9-1.32535601020004-2.00244947055753	chr8	88297733	88298830	+	0	NA	intron (NM_028007, intron 8 of 17)	Lx9|LINE|L1	66567	NM_028007	71927	Mm.61018	NM_028007	ENSMUSG00000031703	Itfg1	2310047C21Rik|AI314457|Cda08|D8Wsu49e	integrin alpha FG-GAP repeat containing 1	protein-coding
unique_peak1-4456-9-0-3.18961340640422-3.01029995663981	chr2	174294916	174295444	+	0	NA	intron (NM_025531, intron 1 of 5)	intron (NM_025531, intron 1 of 5)	3262	NM_025531	66390	Mm.182294	NM_025531	ENSMUSG00000016257	Slmo2	2310042G06Rik|AA407013	slowmo homolog 2 (Drosophila)	protein-coding
common_peak2-24268-19-41--0.989630096117074-1.72734829286054	chr16	94327818	94328613	+	0	NA	intron (NM_011377, intron 7 of 10)	intron (NM_011377, intron 7 of 10)	181248	NM_139145	110948	Mm.30921	NM_139145	ENSMUSG00000040820	Hlcs	410I21.SP6|D16Jhu34	holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase)	protein-coding
common_peak2-24443-23-21-0.262335885871783-0.416752705545949	chr17	21909061	21909722	+	0	NA	Intergenic	LTRIS3|LTR|ERV1	38700	NM_001164676	381067	Mm.482723	NM_001164676	ENSMUSG00000061544	Zfp229	-	zinc finger protein 229	protein-coding
common_peak1-16310-26-38--0.357503126703786-0.505877949819268	chr5	114772915	114773702	+	0	NA	exon (NM_001164573, exon 5 of 31)	exon (NM_001164573, exon 5 of 31)	8358	NM_001164573	231646	Mm.238285	NM_146163	ENSMUSG00000066952	Myo1h	4631401O15Rik	myosin 1H	protein-coding
unique_peak1-3801-15-1-3.01216475055566-4.18809100057339	chr19	60496196	60496788	+	0	NA	Intergenic	Intergenic	47715	NM_201615	226278	Mm.377241	NM_201615	ENSMUSG00000045052	Prlhr	Gm339|Gpr10|Gr3|Prrpr	prolactin releasing hormone receptor	protein-coding
common_peak1-11657-169-264-0.0981594296959312-0.459566837085394	chr16	24392051	24395089	+	0	NA	non-coding (NR_037954, exon 1 of 2)	non-coding (NR_037954, exon 1 of 2)	134	NM_178665	210126	Mm.209385	NM_178665	ENSMUSG00000033306	Lpp	9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16	LIM domain containing preferred translocation partner in lipoma	protein-coding
unique_peak1-5673-9-0-3.18961340640422-3.01029995663981	chr6	31110444	31110961	+	0	NA	intron (NR_110471, intron 2 of 3)	Charlie14a|DNA|MER1_type	57772	NR_110470	232685	Mm.443019	NM_144555		Lincpint	MNCb-1768|Pint|linc-Pint	long intergenic non-protein coding RNA, Trp53 induced transcript	ncRNA
common_peak1-19146-9-6-0.382258484346616-1.11707584880836	chr9	86701167	86701601	+	0	NA	non-coding (NR_102729, exon 14 of 30)	non-coding (NR_102729, exon 14 of 30)	64950	NM_178738	244954	Mm.257629	NM_178738	ENSMUSG00000033491	Prss35	6030424L22Rik|P3D9	protease, serine 35	protein-coding
common_peak2-27338-81-174--0.579161508823764-2.74121396445675	chr3	69315891	69317840	+	0	NA	intron (NM_178726, intron 2 of 3)	intron (NM_178726, intron 2 of 3)	86017	NM_020026	26879	Mm.153710	NM_020026	ENSMUSG00000043300	B3galnt1	B3galt3|b3GT3	UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 1	protein-coding
common_peak1-9246-79-65-0.784441047818166-3.25122790825921	chr11	86591876	86594828	+	0	NA	intron (NM_026191, intron 12 of 17)	PB1D9|SINE|Alu	-22358	NM_001003908	67300	Mm.254588	NM_001003908	ENSMUSG00000047126	Cltc	3110065L21Rik|CHC|R74732	clathrin, heavy polypeptide (Hc)	protein-coding
unique_peak2-39150-0-7--3.84013093047421-1.80617997398389	chr8	87472869	87473385	+	0	NA	intron (NM_144929, intron 1 of 5)	intron (NM_144929, intron 1 of 5)	2237	NM_144929	234542	Mm.461701	NM_144929	ENSMUSG00000048617	Rtbdn	A330096I21Rik|BC022744|Rtbnd	retbindin	protein-coding
unique_peak1-6392-27-5-2.40658345017408-5.07532537266956	chr7	79259284	79260377	+	0	NA	intron (NM_001024703, intron 19 of 22)	intron (NM_001024703, intron 19 of 22)	191651	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding
common_peak2-24472-17-30--0.735899972181837-0.841847921495509	chr17	24470362	24471236	+	0	NA	intron (NM_001031621, intron 4 of 29)	intron (NM_001031621, intron 4 of 29)	13398	NM_001031621	381072	Mm.328842	NM_001031621	ENSMUSG00000035435	Abca17	-	ATP-binding cassette, sub-family A (ABC1), member 17	protein-coding
common_peak2-29505-18-27--0.494435770829252-0.528262014464654	chr6	34273208	34274437	+	0	NA	Intergenic	Intergenic	-6333	NM_009658	11677	Mm.451	NM_009658	ENSMUSG00000001642	Akr1b3	ALR2|AR|Ahr-1|Ahr1|Akr1b1|Aldor1|Aldr1	aldo-keto reductase family 1, member B3 (aldose reductase)	protein-coding
common_peak1-15682-7-16--1.28837201095215-1.08658567012551	chr4	138216077	138216557	+	0	NA	Intergenic	LTR79|LTR|ERVL	-36410	NM_029401	75718	Mm.251530	NM_029401		Vwa5b1	4931403E03Rik	von Willebrand factor A domain containing 5B1	protein-coding
unique_peak2-38890-10-10--0.103016273628528-0.301029995663987	chr8	8487740	8488287	+	0	NA	Intergenic	Intergenic	172760	NM_010111	13642	Mm.209813	NM_010111	ENSMUSG00000001300	Efnb2	ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1	ephrin B2	protein-coding
common_peak2-21463-7-9--0.522837264589173-1.05908390183068	chr11	87404123	87404427	+	0	NA	TTS (NM_001284392)	TTS (NM_001284392)	-1444	NM_133215	170749	Mm.399376	NM_133215	ENSMUSG00000018401	Mtmr4	AA596759|ESTM44|FYVE-DSP2|ZFYVE11|mKIAA0647	myotubularin related protein 4	protein-coding
unique_peak2-33874-6-8--0.60452689106201-1.03789460276074	chr12	25117858	25118401	+	0	NA	Intergenic	Intergenic	-65317	NM_020614	21340	Mm.39082	NM_020614	ENSMUSG00000059669	Taf1b	4930408G01Rik|A230108M10Rik|TAFI68|Tafi86	TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B	protein-coding
unique_peak2-38712-1-5--2.2120195109379-1.32905871926422	chr7	110656383	110656729	+	0	NA	Intergenic	Intergenic	-1098	NM_147081	259085	Mm.377830	NM_147081	ENSMUSG00000045584	Olfr610	MOR9-2	olfactory receptor 610	protein-coding
unique_peak2-33808-4-7--1.02346051385325-1.09384600808989	chr11	120932958	120933354	+	0	NA	intron (NM_145373, intron 2 of 5)	IAPEz-int|LTR|ERVK	-8273	NM_026907	58210	Mm.116986	NM_026907	ENSMUSG00000039364	Sectm1b	1810003C24Rik|K12|Sectm1	secreted and transmembrane 1B	protein-coding
common_peak1-12799-9-16--0.897849434846119-0.732381977911291	chr18	65053105	65053750	+	0	NA	intron (NM_001114386, intron 1 of 30)	intron (NM_001114386, intron 1 of 30)	6017	NM_001114386	83814	Mm.98668	NM_031881	ENSMUSG00000024589	Nedd4l	1300012C07Rik|Nedd4-2|Nedd4b	neural precursor cell expressed, developmentally down-regulated gene 4-like	protein-coding
unique_peak2-34792-5-10--1.16381195464315-1.33892459842472	chr15	63484562	63485013	+	0	NA	Intergenic	Intergenic	155507	NM_031378	83492	Mm.335619	NM_031378	ENSMUSG00000079025	Gsdmc	Gsdmc1|Mlze	gasdermin C	protein-coding
unique_peak2-38627-4-10--1.48289213249054-1.5150158574804	chr7	81179871	81180392	+	0	NA	Intergenic	Intergenic	-21563	NM_009181	20450	Mm.4954	NM_009181	ENSMUSG00000025789	St8sia2	AI323367|ST8SiaII|STX|Siat8b	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2	protein-coding
unique_peak1-2653-12-2-2.06381348436648-2.79529063155376	chr16	50030263	50030841	+	0	NA	intron (NR_045935, intron 2 of 3)	RSINE1|SINE|B4	42413	NR_045935	224180	Mm.146439	NM_175010		Gm4827	B130050K08|EG224180	predicted gene 4827	ncRNA
common_peak1-13311-109-165-0.0111202505402765-0.303646243306683	chr19	41846672	41848922	+	0	NA	intron (NM_027667, intron 10 of 11)	intron (NM_027667, intron 10 of 11)	26346	NR_040320	100502871	Mm.394485	NR_040320		Gm19424	-	predicted gene, 19424	ncRNA
unique_peak1-1106-8-4-0.683294323060208-1.21878474469819	chr11	90228760	90229235	+	0	NA	intron (NM_172563, intron 2 of 3)	intron (NM_172563, intron 2 of 3)	23234	NM_172563	217082	Mm.158903	NM_172563	ENSMUSG00000003949	Hlf	E230015K02Rik	hepatic leukemia factor	protein-coding
common_peak1-12635-70-91-0.0964049603183854-0.357340306497258	chr18	34776720	34778191	+	0	NA	intron (NM_001289606, intron 2 of 20)	B1F2|SINE|Alu	-6823	NM_001166407	19348	Mm.258846	NM_009004	ENSMUSG00000003779	Kif20a	AA415432|Rab6kifl	kinesin family member 20A	protein-coding
unique_peak1-4242-8-2-1.42025991722641-1.65811743852845	chr2	126360385	126360949	+	0	NA	Intergenic	Lx3C|LINE|L1	-18093	NM_011978	26458	Mm.290044	NM_011978		Slc27a2	ACSVL1|FATP2|VLCS|Vlac|Vlacs	solute carrier family 27 (fatty acid transporter), member 2	protein-coding
common_peak1-16495-12-18--0.599151528355947-0.476916024233333	chr5	138994943	138995594	+	0	NA	Intergenic	Intergenic	10654	NM_029693	76658	Mm.73235	NM_029693	ENSMUSG00000029526	1700123K08Rik	-	RIKEN cDNA 1700123K08 gene	protein-coding
unique_peak2-36678-4-9--1.34538860874061-1.36011389749466	chr3	31022288	31022798	+	0	NA	TTS (NM_011386)	TTS (NM_011386)	-26299	NM_008770	18417	Mm.4425	NM_008770	ENSMUSG00000037625	Cldn11	Claudin-11|Claudin11|Osp|Otm	claudin 11	protein-coding
common_peak1-7599-10-6-0.549060422951165-1.21398586181642	chr1	58391832	58392290	+	0	NA	intron (NM_001008419, intron 23 of 35)	B4A|SINE|B4	56891	NM_001008419	213043	Mm.414292	NM_001008419	ENSMUSG00000079554	Aox2	Aoh3|Aox3l1	aldehyde oxidase 2	protein-coding
unique_peak1-1311-13-7-0.778472030637769-0.817533494790411	chr11	120538371	120539054	+	0	NA	intron (NM_198223, intron 1 of 14)	intron (NM_198223, intron 1 of 14)	737	NM_001164224	68938	Mm.294020	NM_026877	ENSMUSG00000025142	Aspscr1	1190006K01Rik|ASPC|ASPCR1|ASPL|ASPS|RCC17|TUG	alveolar soft part sarcoma chromosome region, candidate 1 (human)	protein-coding
common_peak1-17823-11-16--0.578769256998726-0.503257505534083	chr7	105399335	105400085	+	0	NA	intron (NM_025408, intron 6 of 10)	ID_B1|SINE|B4	-51725	NM_001081167	272411	Mm.98333	NM_001081167	ENSMUSG00000074004	B3gnt6	BC039789|Core-3|Core3	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)	protein-coding
unique_peak1-4034-11-1-2.50869358425161-2.83420869758413	chr2	52987815	52988326	+	0	NA	intron (NM_172409, intron 25 of 26)	(TATG)n|Simple_repeat|Simple_repeat	62151	NM_018785	56194	Mm.257474	NM_018785	ENSMUSG00000061136	Prpf40a	2810012K09Rik|FBP11|Fnbp11|Fnbp3	PRP40 pre-mRNA processing factor 40 homolog A (yeast)	protein-coding
unique_peak1-7352-14-5-1.31425365963649-1.4372489031793	chrX	13344503	13345290	+	0	NA	intron (NM_001284503, intron 2 of 26)	ID_B1|SINE|B4	78786	NM_001284505	12361	Mm.327591	NM_009806	ENSMUSG00000031012	Cask	DXPri1|DXRib1|LIN-2|Pals3|mLin-2	calcium/calmodulin-dependent serine protein kinase (MAGUK family)	protein-coding
unique_peak1-2388-8-1-2.00522241794757-2.05605744720049	chr15	97501999	97502516	+	0	NA	Intergenic	Intergenic	33996	NM_028003	71919	Mm.12255	NM_028003	ENSMUSG00000022466	Rpap3	2310042P20Rik|D15Ertd682e	RNA polymerase II associated protein 3	protein-coding
unique_peak2-39771-3-11--1.99894559068043-1.95434855131066	chrX	7648379	7648835	+	0	NA	intron (NM_011514, intron 2 of 5)	intron (NM_011514, intron 2 of 5)	2832	NM_001290716	20937	Mm.9244	NM_011514	ENSMUSG00000039231	Suv39h1	AI852103|AL022883|DXHXS7466e|H3-K9-HMTase 1|KMT1A|mIS6	suppressor of variegation 3-9 homolog 1 (Drosophila)	protein-coding
unique_peak2-35180-5-9--1.02630843089322-1.21398586181642	chr16	49937687	49938250	+	0	NA	Intergenic	Intergenic	-42605	NR_045001	628951	Mm.428032	NR_045001		Gm6936	-	predicted gene 6936	ncRNA
unique_peak1-5999-23-5-2.13680500378792-3.68490442130631	chr6	100195446	100196457	+	0	NA	intron (NM_019743, intron 2 of 4)	B1_Mur3|SINE|Alu	41401	NM_019743	56353	Mm.321633	NM_019743	ENSMUSG00000072872	Rybp	2410018J24Rik|DEDAF|YEAF1	RING1 and YY1 binding protein	protein-coding
common_peak1-14729-19-19-0.0807592317743238-0.322753776620787	chr3	84581910	84582586	+	0	NA	Intergenic	Intergenic	-37251	NM_001177773	50754	Mm.196475	NM_080428	ENSMUSG00000028086	Fbxw7	1110001A17Rik|AGO|Cdc4|Fbw7|Fbwd6|Fbx30|Fbxo30|Fbxw6|SEL-10	F-box and WD-40 domain protein 7	protein-coding
unique_peak2-37587-4-8--1.19338551529556-1.21878474469819	chr5	38554169	38554613	+	0	NA	Intergenic	Intergenic	-3685	NM_010942	18196	Mm.7414	NM_010942	ENSMUSG00000029126	Nsg1	Neep21|m234|p21	neuron specific gene family member 1	protein-coding
common_peak1-18344-12-15--0.351224014912361-0.332077462497413	chr8	68734706	68735443	+	0	NA	intron (NM_001293784, intron 4 of 8)	Lx|LINE|L1	-175126	NM_001166375	72925	Mm.380457	NM_175188	ENSMUSG00000036469	March1	2900024D24Rik|BB085186	membrane-associated ring finger (C3HC4) 1	protein-coding
unique_peak1-4100-9-2-1.60465090568306-1.87199725847353	chr2	73546649	73547285	+	0	NA	intron (NM_001113246, intron 4 of 12)	intron (NM_001113246, intron 4 of 12)	-48487	NM_001166604	108699	Mm.257073	NM_029716	ENSMUSG00000056486	Chn1	0610007I19Rik|0710001E19Rik|1700112L09Rik|2900046J01Rik|AI413815|ARHGAP2	chimerin 1	protein-coding
common_peak2-25078-8-8--0.164702583494742-1.00793137938329	chr18	35563517	35563952	+	0	NA	intron (NM_030749, intron 3 of 9)	L1MC4a|LINE|L1	94845	NM_030749	81500	Mm.291482	NM_030749	ENSMUSG00000024357	Sil1	1810057E01Rik|AI042831|wz	endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)	protein-coding
common_peak1-12292-65-96--0.107746902710001-0.343065785969797	chr17	46029696	46031872	+	0	NA	Intergenic	Intergenic	131328	NM_001110267	22339	Mm.282184	NM_009505	ENSMUSG00000023951	Vegfa	Vegf|Vpf	vascular endothelial growth factor A	protein-coding
common_peak1-12505-17-21--0.24113528043226-0.322753776620787	chr17	88631301	88632188	+	0	NA	Intergenic	Intergenic	106892	NM_001190356	225058	Mm.312053	NM_001190356		Gm4832	EG225058	predicted gene 4832	protein-coding
common_peak1-7858-38-24-0.927596469523806-2.07189913552604	chr1	133045765	133047077	+	0	NA	Intergenic	RMER17C|LTR|ERVK	-3363	NM_001136070	16865	Mm.276294	NM_010709	ENSMUSG00000026427	Eif2d	D1Ertd5e|Lgtn	eukaryotic translation initiation factor 2D	protein-coding
common_peak2-21108-112-169-0.0238593641825808-0.311189162539849	chr11	52098547	52100012	+	0	NA	Intergenic	MIR|SINE|MIR	-3527	NM_009331	21414	Mm.31630	NM_009331	ENSMUSG00000000782	Tcf7	AI465550|TCF-1|Tcf1	transcription factor 7, T cell specific	protein-coding
common_peak1-14935-17-11-0.633333837483882-0.769930178837768	chr3	102715185	102715931	+	0	NA	intron (NM_011516, intron 15 of 32)	intron (NM_011516, intron 15 of 32)	24465	NM_011516	20957	Mm.243849	NM_011516	ENSMUSG00000027855	Sycp1	SCP1	synaptonemal complex protein 1	protein-coding
unique_peak1-162-8-0-3.00522241794757-2.70926996097583	chr1	73824794	73825309	+	0	NA	intron (NR_045311, intron 6 of 8)	intron (NR_045311, intron 6 of 8)	77098	NR_105769	102465179		NR_105769	miRBase:MI0021879	Mir6351	mmu-mir-6351	microRNA mir-6351	ncRNA
common_peak2-31648-59-56-0.492473986707837-1.22554633931855	chr8	125253957	125254959	+	0	NA	Intergenic	RSINE1|SINE|B4	-31449	NM_009824	12398	Mm.194339	NM_009824	ENSMUSG00000006362	Cbfa2t3	A630044F12Rik|AI465270|AW229127|Cbfa2t3h|ETO-2|Eto2|MTGR2	core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human)	protein-coding
unique_peak1-2515-7-5-0.214128329577033-1.01466476204226	chr16	18789492	18790001	+	0	NA	intron (NM_001161623, intron 12 of 17)	intron (NM_001161623, intron 12 of 17)	12806	NM_013805	12741	Mm.22768	NM_013805	ENSMUSG00000041378	Cldn5	AI854493|MBEC1|Tmvcf	claudin 5	protein-coding
common_peak1-17961-24-47--0.791752597953439-1.35770911664594	chr7	130546444	130547399	+	0	NA	intron (NM_025304, intron 4 of 10)	intron (NM_025304, intron 4 of 10)	25425	NM_025304	30949	Mm.260527	NM_025304	ENSMUSG00000030763	Lcmt1	AL033290|LCMT-1|Lcmt	leucine carboxyl methyltransferase 1	protein-coding
common_peak2-23613-86-75-0.727708280588768-3.14193502179643	chr15	81744683	81746383	+	0	NA	TTS (NM_030229)	TTS (NM_030229)	11110	NM_030229	78929	Mm.215115	NM_030229	ENSMUSG00000022476	Polr3h	5031409G22Rik|RPC8	polymerase (RNA) III (DNA directed) polypeptide H	protein-coding
common_peak2-30089-13-11-0.193509529916613-0.379391706698377	chr6	134826548	134827054	+	0	NA	intron (NM_001167699, intron 1 of 1)	intron (NM_001167699, intron 1 of 1)	11002	NR_074084	14760	Mm.4787	NM_008157	ENSMUSG00000032641	Gpr19	-	G protein-coupled receptor 19	protein-coding
common_peak2-29586-24-41--0.599107520011044-0.83607543869935	chr6	50109692	50110816	+	0	NA	intron (NM_001164733, intron 4 of 13)	intron (NM_001164733, intron 4 of 13)	50014	NM_001164733	56524	Mm.41288	NM_008016	ENSMUSG00000038388	Mpp6	P55t|Pals2	membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6)	protein-coding
common_peak2-23239-6-12--1.13504160776079-1.45089835786865	chr15	9070578	9071107	+	0	NA	promoter-TSS (NM_013787)	promoter-TSS (NM_013787)	516	NM_177178	320506	Mm.259886	NM_177178	ENSMUSG00000039704	Lmbrd2	9930036E21Rik	LMBR1 domain containing 2	protein-coding
unique_peak2-33625-4-6--0.830815435910851-0.989110657569874	chr11	97442741	97443108	+	0	NA	Intergenic	ID_B1|SINE|B4	-6484	NM_018873	56013	Mm.342665	NM_018873	ENSMUSG00000038453	Srcin1	P140|SNIP|mKIAA1684|p140Cap	SRC kinase signaling inhibitor 1	protein-coding
unique_peak1-3764-11-2-1.92373108353046-2.32232533660526	chr19	55212461	55212933	+	0	NA	Intergenic	Intergenic	-38760	NM_008149	14732	Mm.210196	NM_008149	ENSMUSG00000024978	Gpam	GPAT|GPAT1	glycerol-3-phosphate acyltransferase, mitochondrial	protein-coding
common_peak2-28035-18-25--0.38752056691274-0.421916810733234	chr4	56801751	56802640	+	0	NA	intron (NM_026079, intron 10 of 36)	intron (NM_026079, intron 10 of 36)	-13006	NM_001081420	230234	Mm.268148	NM_001081420	ENSMUSG00000038827	Fam206a	-	family with sequence similarity 206, member A	protein-coding
common_peak1-9792-32-38--0.00631019964258872-0.303850168981672	chr12	59219156	59220170	+	0	NA	Intergenic	L1Md_F|LINE|L1	-93128	NM_009216	20605	Mm.278336	NM_009216		Sstr1	SRIF-2|SS-1-R|SS1-R|SS1R|Smstr-1|Smstr1|sst1	somatostatin receptor 1	protein-coding
common_peak2-22433-25-55--0.945505016712498-2.0775794634935	chr13	38311337	38312789	+	0	NA	intron (NM_026382, intron 6 of 8)	intron (NM_026382, intron 6 of 8)	15255	NM_026382	67797	Mm.250783	NM_026382	ENSMUSG00000021431	Snrnp48	1110050F08Rik|6530403A03Rik|C6orf151	small nuclear ribonucleoprotein 48 (U11/U12)	protein-coding
unique_peak1-6024-8-5-0.420259917226415-1.10484139239135	chr6	112947092	112947614	+	0	NA	Intergenic	Intergenic	-48968	NM_008188	14911	Mm.781	NM_008188	ENSMUSG00000030264	Thumpd3	AW556087|Gt(ROSA)26asSor|Gtrosa26as	THUMP domain containing 3	protein-coding
common_peak2-31061-210-278-0.402011819238375-3.08954997552887	chr8	20550008	20552255	+	0	NA	Intergenic	Intergenic	-530739	NR_028428	381598	Mm.359054	NM_001024708	ENSMUSG00000071793	2610005L07Rik	2810038F24Rik|6720476A01Rik	cadherin 11 pseudogene	pseudo
unique_peak2-36800-6-8--0.60452689106201-1.03789460276074	chr3	83300401	83300769	+	0	NA	Intergenic	PB1D10|SINE|Alu	77455	NR_036591	69460	Mm.389464	NR_036591		1700028M03Rik	-	RIKEN cDNA 1700028M03 gene	ncRNA
unique_peak1-2089-13-2-2.19350952991661-3.03832868024006	chr15	36934668	36935244	+	0	NA	intron (NM_026521, intron 1 of 3)	intron (NM_026521, intron 1 of 3)	2201	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
unique_peak1-1640-23-1-3.72176750450908-6.57132529354008	chr13	51881318	51882241	+	0	NA	intron (NM_001281880, intron 1 of 16)	MER44A|DNA|MER2_type	7337	NM_001281880	20354	Mm.33903	NM_013660	ENSMUSG00000021451	Sema4d	CD100|Semacl2|Semaj|Semcl2|coll-4	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D	protein-coding
unique_peak1-891-8-1-2.00522241794757-2.05605744720049	chr11	33212786	33213227	+	0	NA	intron (NR_110973, intron 19 of 28)	intron (NR_110973, intron 19 of 28)	-109418	NM_019916	27140	Mm.25362	NM_019916	ENSMUSG00000040610	Tlx3	Hox11l2|Rnx|Tlx1l2	T cell leukemia, homeobox 3	protein-coding
common_peak2-24025-11-13--0.298661337805991-0.337263207250336	chr16	23102688	23103144	+	0	NA	Intergenic	Intergenic	-4625	NM_001123038	13682	Mm.260084	NM_013506	ENSMUSG00000022884	Eif4a2	4833432N07Rik|BM-010|Ddx2b|Eif4|eIF-4A-II|eIF4A-II	eukaryotic translation initiation factor 4A2	protein-coding
common_peak1-19312-12-21--0.810655633549659-0.713635438203849	chr9	122886791	122887516	+	0	NA	exon (NM_010620, exon 8 of 35)	exon (NM_010620, exon 8 of 35)	26954	NM_010620	209737	Mm.278920	NM_010620	ENSMUSG00000036768	Kif15	3110023M17Rik|3930402I10Rik|D330038N01|HKLP2|Knsl7|b2b1117.1Clo	kinesin family member 15	protein-coding
common_peak2-24044-17-25--0.482143379936054-0.479250674391597	chr16	25384646	25385581	+	0	NA	intron (NM_175165, intron 4 of 5)	intron (NM_175165, intron 4 of 5)	98210	NM_175165	71338	Mm.126851	NM_175165	ENSMUSG00000048399	Tprg	5430420C16Rik|Tprg1	transformation related protein 63 regulated	protein-coding
common_peak1-15312-27-24-0.347689761120511-0.550049347815233	chr4	45320024	45320811	+	0	NA	intron (NM_027266, intron 5 of 8)	intron (NM_027266, intron 5 of 8)	10377	NM_027266	69934	Mm.46761	NM_027266	ENSMUSG00000035601	Trmt10b	2610042J10Rik|Rg9mtd3|Rnmtd3	tRNA methyltransferase 10B	protein-coding
common_peak2-20695-39-58--0.266881802442688-0.465606867440106	chr10	92721611	92722641	+	0	NA	intron (NM_001282967, intron 2 of 3)	B1_Mus2|SINE|Alu	51778	NM_013508	13713	Mm.4454	NM_013508	ENSMUSG00000008398	Elk3	D430049E23Rik|Erp|Etrp|Net|Sap-2	ELK3, member of ETS oncogene family	protein-coding
unique_peak1-6080-9-3-1.18961340640422-1.57096726280955	chr6	120955185	120955688	+	0	NA	intron (NM_001270475, intron 17 of 31)	intron (NM_001270475, intron 17 of 31)	76209	NM_153396	194401	Mm.122399	NM_153396	ENSMUSG00000003178	Mical3	C130040D16Rik|Mical-3|mKIAA1364	microtubule associated monooxygenase, calponin and LIM domain containing 3	protein-coding
common_peak1-10992-76-98-0.132587765783672-0.428021281918605	chr15	36373519	36375338	+	0	NA	Intergenic	ID_B1|SINE|B4	52118	NM_175134	68839	Mm.396537	NM_175134	ENSMUSG00000048307	Ankrd46	1110054N06Rik|AI314978|AI987733	ankyrin repeat domain 46	protein-coding
common_peak1-10926-59-17-2.15543899943027-9.94891197403053	chr15	8938606	8940969	+	0	NA	intron (NM_198024, intron 1 of 11)	intron (NM_198024, intron 1 of 11)	21838	NM_198024	223332	Mm.321371	NM_198024		Ranbp3l	C130037N17Rik	RAN binding protein 3-like	protein-coding
common_peak2-19872-7-11--0.785871670422967-1.21681515183528	chr1	93289712	93290000	+	0	NA	intron (NM_023343, intron 1 of 11)	B4A|SINE|B4	5504	NM_023343	67444	Mm.337240	NM_023343	ENSMUSG00000026309	Ilkap	0710007A14Rik|1600009O09Rik|PP2C-DELTA	integrin-linked kinase-associated serine/threonine phosphatase 2C	protein-coding
common_peak2-22360-15-23--0.5727977501655-0.575340103425218	chr13	25019719	25020424	+	0	NA	intron (NM_172532, intron 1 of 9)	intron (NM_172532, intron 1 of 9)	-9199	NR_102323	493800	Mm.458692	NR_102323		9330162012Rik	-	cDNA RIKEN 9330162012 gene	ncRNA
common_peak2-24364-6-8--0.60452689106201-1.03789460276074	chr17	6811910	6812397	+	0	NA	intron (NM_001166627, intron 4 of 4).3	intron (NM_001166627, intron 4 of 4).3	5657	NM_001166630	100040563	Mm.457381	NM_001166630		Dynlt1c	100040603|Dynlt1d	dynein light chain Tctex-type 1C	protein-coding
common_peak2-26484-10-5-0.771452844287613-1.33892459842472	chr2	80339033	80339457	+	0	NA	Intergenic	RSINE1|SINE|B4	-51692	NM_011356	20378	Mm.427436	NM_011356	ENSMUSG00000027004	Frzb	Frp|Sfrp3|frezzled|fritz|frzb-1	frizzled-related protein	protein-coding
unique_peak1-6250-9-1-2.18961340640422-2.31132995230379	chr7	19334159	19334660	+	0	NA	Intergenic	RLTR9C|LTR|ERVK	30970	NM_001004152	243862	Mm.389833	NM_001004152	ENSMUSG00000044903	Psg22	AA408604|cea9	pregnancy-specific glycoprotein 22	protein-coding
common_peak2-20177-19-19-0.0807592317743238-0.322753776620787	chr1	171470858	171471780	+	0	NA	Intergenic	Intergenic	-9724	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
unique_peak2-33677-8-6-0.197867495889966-1.03789460276074	chr11	102407640	102408076	+	0	NA	intron (NM_001159492, intron 1 of 7)	intron (NM_001159492, intron 1 of 7)	9614	NM_001159492	237943	Mm.260282	NM_001159492	ENSMUSG00000034621	Gpatch8	5430405G24Rik|AU018890|ENSMUSG00000075516|Fbm1|Gpatc8|mKIAA0553	G patch domain containing 8	protein-coding
unique_peak1-4105-10-1-2.35641534500877-2.57096726280955	chr2	75777173	75777595	+	0	NA	promoter-TSS (NM_028235)	promoter-TSS (NM_028235)	-865	NM_028235	72421	Mm.275109	NM_028235	ENSMUSG00000075273	Ttc30b	2510042P03Rik|Tcc30b	tetratricopeptide repeat domain 30B	protein-coding
unique_peak1-3323-20-9-1.16614668970383-1.52222891542741	chr18	82504028	82504947	+	0	NA	Intergenic	Lx7|LINE|L1	71682	NM_008082	14427	Mm.6219	NM_008082	ENSMUSG00000024553	Galr1	Galnr1	galanin receptor 1	protein-coding
unique_peak2-35732-4-8--1.19338551529556-1.21878474469819	chr18	35676712	35677358	+	0	NA	Intergenic	Intergenic	-18456	NM_030749	81500	Mm.291482	NM_030749	ENSMUSG00000024357	Sil1	1810057E01Rik|AI042831|wz	endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)	protein-coding
unique_peak1-1230-9-2-1.60465090568306-1.87199725847353	chr11	110698049	110698578	+	0	NA	Intergenic	MTD|LTR|MaLR	-131034	NM_010604	16517	Mm.30176	NM_010604	ENSMUSG00000051497	Kcnj16	6430410F18Rik|AI132396|Kir5.1	potassium inwardly-rectifying channel, subfamily J, member 16	protein-coding
common_peak2-32097-10-16--0.73104749624157-0.604422558181019	chr9	99153153	99153876	+	0	NA	intron (NM_023873, intron 2 of 17)	intron (NM_023873, intron 2 of 17)	9627	NM_023873	68121	Mm.288739	NM_023873	ENSMUSG00000056267	Cep70	6720484E09Rik|Bite|C030018L16Rik	centrosomal protein 70	protein-coding
unique_peak1-4393-9-3-1.18961340640422-1.57096726280955	chr2	164551589	164552177	+	0	NA	Intergenic	Intergenic	11078	NM_001040055	641368	Mm.422380	NM_001040055	ENSMUSG00000074593	Spint5	Gm14316|OTTMUSG00000016293	serine protease inhibitor, Kunitz type 5	protein-coding
unique_peak1-1210-83-13-3.10686770304852-22.1052998220326	chr11	106578779	106581762	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-3675	NM_008816	18613	Mm.343951	NM_008816	ENSMUSG00000020717	Pecam1	C85791|Cd31|PECAM-1|Pecam	platelet/endothelial cell adhesion molecule 1	protein-coding
unique_peak2-34608-3-5--0.998945590680433-0.96108193396963	chr14	73402557	73402968	+	0	NA	Intergenic	Intergenic	-22648	NR_027860	668489	Mm.158324	NR_027860		Gm9199	EG668489	glycine cleavage system protein H (aminomethyl carrier) pseudogene	pseudo
common_peak2-25190-25-19-0.539921810457743-0.756750750680359	chr18	57805205	57805969	+	0	NA	intron (NM_029290, intron 5 of 6)	intron (NM_029290, intron 5 of 6)	-7348	NR_045360	70157	Mm.490532	NR_045360		2210409D07Rik	-	RIKEN cDNA 2210409D07 gene	ncRNA
unique_peak2-32815-2-10--2.37688587490062-2.09384600808989	chr1	184753131	184753574	+	0	NA	intron (NM_144796, intron 1 of 7)	intron (NM_144796, intron 1 of 7)	58315	NM_144796	96935	Mm.331052	NM_144796	ENSMUSG00000038576	Susd4	AI848994|E430021N18Rik|N28096	sushi domain containing 4	protein-coding
common_peak1-8458-42-114--1.10316072307719-5.058526020066	chr10	79987799	79989248	+	0	NA	exon (NM_026094, exon 22 of 28)	exon (NM_026094, exon 22 of 28)	13346	NM_026094	67331	Mm.52511	NM_026094	ENSMUSG00000003341	Atp8b3	1700042F02Rik|1700056N23Rik|ATPIK|SAPLT	ATPase, class I, type 8B, member 3	protein-coding
common_peak1-14543-75-173--0.703876504105443-3.71122005935635	chr3	31094784	31096292	+	0	NA	Intergenic	Intergenic	46696	NM_008770	18417	Mm.4425	NM_008770	ENSMUSG00000037625	Cldn11	Claudin-11|Claudin11|Osp|Otm	claudin 11	protein-coding
common_peak2-20764-22-24-0.00342791531268016-0.305461879681376	chr10	116266276	116266921	+	0	NA	intron (NM_001033333, intron 9 of 24)	intron (NM_001033333, intron 9 of 24)	67337	NM_001033333	237558	Mm.336386	NM_001033333	ENSMUSG00000034057	Myrfl	Gm239	myelin regulatory factor-like	protein-coding
common_peak1-12134-98-149--0.0270499970653297-0.303964440167268	chr17	27203329	27205202	+	0	NA	intron (NM_080553, intron 1 of 57)	intron (NM_080553, intron 1 of 57)	10016	NM_080553	16440	Mm.458106	NM_080553	ENSMUSG00000042644	Itpr3	Ip3r3|Itpr-3	inositol 1,4,5-triphosphate receptor 3	protein-coding
common_peak1-17766-11-7-0.508693584251613-1.21681515183528	chr7	90319977	90320459	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-200317	NR_045855	71285	Mm.76818	NR_045855		4933430H16Rik	-	RIKEN cDNA 4933430H16 gene	ncRNA
unique_peak2-36077-3-5--0.998945590680433-0.96108193396963	chr19	55514943	55515292	+	0	NA	intron (NM_016862, intron 5 of 7)	B3A|SINE|B2	124570	NM_001293686	53611	Mm.258637	NM_016862	ENSMUSG00000024983	Vti1a	1110014F16Rik|1110018K19Rik|4921537J05Rik|MVti1|MVti1a|Vti1|Vti1-rp2	vesicle transport through interaction with t-SNAREs 1A	protein-coding
unique_peak1-2438-9-0-3.18961340640422-3.01029995663981	chr15	101521169	101521767	+	0	NA	intron (NM_008476, intron 7 of 8)	B2_Mm2|SINE|B2	472	NM_016879	53622	Mm.347934	NM_016879		Krt85	AA589597|BB007925|Hb5|Krt2-18	keratin 85	protein-coding
common_peak1-19507-36-40-0.121769081549671-0.36493371439645	chrX	166439983	166441337	+	0	NA	Intergenic	Intergenic	-23811	NR_029457	654820	Mm.34441	NM_001039559	ENSMUSG00000072844	G530011O06Rik	-	RIKEN cDNA G530011O06 gene	ncRNA
unique_peak2-34242-7-22--1.72447112575882-2.07034318903805	chr13	54789412	54790092	+	0	NA	promoter-TSS (NM_001146025)	promoter-TSS (NM_001146025)	-191	NM_001146027	105239	Mm.25366	NM_134064	ENSMUSG00000034928	Rnf44	AI854545|mKIAA1100	ring finger protein 44	protein-coding
unique_peak2-33199-9-12--0.510826311736872-0.394412252720706	chr10	111389525	111390175	+	0	NA	Intergenic	Intergenic	-19901	NM_178610	52705	Mm.34606	NM_178610	ENSMUSG00000063334	Krr1	2610511F02Rik|AI255219|AI428520|D10Ertd773e|Hrb2	KRR1, small subunit (SSU) processome component, homolog (yeast)	protein-coding
common_peak1-9123-15-9-0.690236655668294-0.732381977911291	chr11	74926082	74926761	+	0	NA	intron (NM_001002764, intron 13 of 18)	B3A|SINE|B2	-46928	NR_030454	735274		NR_030454		Mir684-1	Mirn684-1	microRNA 684-1	ncRNA
common_peak2-26131-34-24-0.738212337226542-1.3806499615138	chr2	10079731	10080521	+	0	NA	intron (NM_172471, intron 1 of 13)	C-rich|Low_complexity|Low_complexity	4956	NM_172471	209378	Mm.313876	NM_172471	ENSMUSG00000025780	Itih5	4631408O11Rik|5430408M01Rik|E130106B02	inter-alpha (globulin) inhibitor H5	protein-coding
common_peak1-9212-20-30--0.466121525795682-0.569352520859861	chr11	83298495	83299511	+	0	NA	intron (NM_027427, intron 5 of 15)	B1F1|SINE|Alu	12393	NM_027427	70439	Mm.181050	NM_027427	ENSMUSG00000020680	Taf15	2610111C21Rik|68kDa|TAFII68|Taf2n	TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor	protein-coding
common_peak2-21511-12-15--0.351224014912361-0.332077462497413	chr11	94210480	94211088	+	0	NA	intron (NM_029600, intron 29 of 30)	ORR1B1|LTR|MaLR	21469	NM_146024	71452	Mm.141054	NM_027799	ENSMUSG00000020864	Ankrd40	1110011C06Rik|5530600A18Rik|Gcap15	ankyrin repeat domain 40	protein-coding
common_peak2-28190-22-26--0.107603397076064-0.30528805757448	chr4	116149916	116150907	+	0	NA	Intergenic	Lx|LINE|L1	-13625	NM_008641	17776	Mm.9287	NM_008641	ENSMUSG00000003810	Mast2	MAST205|Mtssk	microtubule associated serine/threonine kinase 2	protein-coding
common_peak1-12111-16-16-0.0308008010177225-0.307611222530525	chr17	26560625	26561411	+	0	NA	intron (NM_001081656, intron 1 of 4)	intron (NM_001081656, intron 1 of 4)	9108	NM_001081656	240055	Mm.133211	NM_001081656	ENSMUSG00000034413	Neurl1b	C230078M08Rik|EG240055	neuralized homolog 1b (Drosophila)	protein-coding
common_peak1-17524-16-25--0.58217607587303-0.633951497070961	chr7	28371613	28372422	+	0	NA	Intergenic	ID_B1|SINE|B4	-4562	NM_001110208	11652	Mm.177194	NM_007434	ENSMUSG00000004056	Akt2	2410016A19Rik|AW554154|PKB|PKBbeta	thymoma viral proto-oncogene 2	protein-coding
common_peak1-13174-23-12-1.02132778636799-1.44787515926925	chr19	12488174	12489189	+	0	NA	Intergenic	B4A|SINE|B4	-8120	NM_146683	258678	Mm.377635	NM_146683	ENSMUSG00000050815	Olfr1441	MOR215-2	olfactory receptor 1441	protein-coding
unique_peak1-4846-8-4-0.683294323060208-1.21878474469819	chr3	152622579	152623035	+	0	NA	intron (NM_012028, intron 2 of 4)	intron (NM_012028, intron 2 of 4)	22364	NM_012028	26938	Mm.40915	NM_012028		St6galnac5	AI851940|Siat7e	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	protein-coding
unique_peak1-2337-17-2-2.63333383748388-3.75443312462699	chr15	84674997	84675717	+	0	NA	intron (NM_001081166, intron 2 of 12)	intron (NM_001081166, intron 2 of 12)	11202	NM_001081166	271305	Mm.101022	NM_001081166	ENSMUSG00000016624	Phf21b	A730032D07Rik	PHD finger protein 21B	protein-coding
common_peak1-10816-66-133--0.547605526031931-1.93246080941676	chr14	87416039	87417652	+	0	NA	intron (NM_019670, intron 5 of 27)	intron (NM_019670, intron 5 of 27)	124076	NM_019670	56419	Mm.440585	NM_019670	ENSMUSG00000022021	Diap3	4930417P13Rik|Dia2|Diaph3|Drf3|mDia2|mKIAA4117|p134MDia2	diaphanous homolog 3 (Drosophila)	protein-coding
common_peak1-18676-18-18-0.0649916377847664-0.323898164595606	chr8	119422059	119422930	+	0	NA	intron (NM_026844, intron 2 of 3)	IAPEz-int|LTR|ERVK	22842	NM_026844	66531	Mm.4011	NM_026844	ENSMUSG00000014633	Cmc2	1110046L09Rik|2310061C15Rik|DC13	COX assembly mitochondrial protein 2	protein-coding
common_peak1-8729-212-126-1.55395890381413-28.0569085153724	chr11	3125326	3129157	+	0	NA	intron (NM_001166547, intron 7 of 18)	intron (NM_001166547, intron 7 of 18)	24219	NM_001166549	74203	Mm.255649	NM_023743	ENSMUSG00000020454	Eif4enif1	2610509L04Rik|A930019J01Rik|AA410001|AU021239|Clast4|D11Ertd166e	eukaryotic translation initiation factor 4E nuclear import factor 1	protein-coding
common_peak1-15969-42-43-0.282897709229887-0.572487971606918	chr5	31596288	31597546	+	0	NA	intron (NM_022424, intron 4 of 6)	intron (NM_022424, intron 4 of 6)	1333	NM_022424	64339	Mm.292544	NM_022424	ENSMUSG00000038552	Fndc4	2810430J06Rik|6330410H20Rik|AB030187|AI838506|AW487863|FRCP1|Fnmp1	fibronectin type III domain containing 4	protein-coding
common_peak2-19677-11-12--0.191746133889479-0.310474156842889	chr1	58029167	58029615	+	0	NA	Intergenic	B1F|SINE|Alu	-2463	NM_001159865	51960	Mm.339711	NM_030211	ENSMUSG00000054770	Kctd18	4932411A20Rik|6530404F10Rik	potassium channel tetramerisation domain containing 18	protein-coding
common_peak2-31088-94-174--0.321621543983013-1.10203333529024	chr8	25596615	25598134	+	0	NA	Intergenic	Intergenic	-47956	NM_026931	69068	Mm.25775	NM_026931	ENSMUSG00000056313	1810011O10Rik	1110065B09Rik|AW121743|AW321058	RIKEN cDNA 1810011O10 gene	protein-coding
unique_peak1-6411-7-0-2.79909083029819-2.40823996531185	chr7	83484396	83484837	+	0	NA	intron (NM_001199224, intron 5 of 22)	intron (NM_001199224, intron 5 of 22)	109843	NM_001199224	244071	Mm.322829	NM_172902	ENSMUSG00000025754	Agbl1	Ccp4|D430020F16|EG244071|Nna1-l1	ATP/GTP binding protein-like 1	protein-coding
common_peak2-20614-32-74--0.94972667127622-2.69422232619315	chr10	80101528	80103316	+	0	NA	intron (NM_134002, intron 9 of 10)	intron (NM_134002, intron 9 of 10)	10021	NM_001159591	103236	Mm.29873	NM_134002	ENSMUSG00000003345	Csnk1g2	2810429I12Rik|AI463719	casein kinase 1, gamma 2	protein-coding
unique_peak2-33740-7-15--1.20090916970181-0.947446088118041	chr11	116523377	116524003	+	0	NA	intron (NM_001163318, intron 4 of 4)	intron (NM_001163318, intron 4 of 4)	5268	NM_001163318	100038570	Mm.390349	NM_001163318	ENSMUSG00000075410	Gm11744	OTTMUSG00000003947|Prcd	predicted gene 11744	protein-coding
common_peak1-14384-21-10-1.11005764662894-1.59083646988122	chr2	168579046	168579997	+	0	NA	intron (NM_201396, intron 1 of 2)	intron (NM_201396, intron 1 of 2)	-11885	NM_001289446	11981	Mm.330819	NM_015731	ENSMUSG00000027546	Atp9a	IIa	ATPase, class II, type 9A	protein-coding
common_peak1-7748-33-22-0.807775606468516-1.45230360914611	chr1	90921633	90923114	+	0	NA	Intergenic	B4A|SINE|B4	9685	NR_040471	73475	Mm.491040	NR_040471		1700067G17Rik	-	RIKEN cDNA 1700067G17 gene	ncRNA
common_peak1-14270-17-9-0.896368243317676-1.09394599973099	chr2	156295093	156295773	+	0	NA	intron (NM_001291121, intron 2 of 21)	intron (NM_001291121, intron 2 of 21)	-5837	NM_001006664	13821	Mm.20852	NM_013510	ENSMUSG00000027624	Epb4.1l1	4.1N|Epb41l1|NBL1|mKIAA0338	erythrocyte protein band 4.1-like 1	protein-coding
common_peak2-19564-26-28-0.0699180970308904-0.316008636696532	chr1	9943343	9944322	+	0	NA	Intergenic	Intergenic	-9633	NR_024067	73824	Mm.28311	NR_024067	ENSMUSG00000098234	Snhg6	1110008H02Rik	small nucleolar RNA host gene 6	ncRNA
unique_peak2-36627-1-8--2.79698201165906-2.05605744720049	chr3	121650991	121651363	+	0	NA	Intergenic	Intergenic	-5067	NM_172525	214137	Mm.229287	NM_172525	ENSMUSG00000039831	Arhgap29	6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1	Rho GTPase activating protein 29	protein-coding
common_peak1-19257-77-116--0.0858381400274073-0.335623886138388	chr9	110684104	110687028	+	0	NA	Intergenic	B3A|SINE|B2	-15123	NM_153099	235628	Mm.292285	NM_153099	ENSMUSG00000044664	Prss42	Tessp2	protease, serine 42	protein-coding
common_peak2-29621-22-6-1.8399291830298-3.01815507148775	chr6	54277865	54278302	+	0	NA	intron (NM_030024, intron 1 of 1)	intron (NM_030024, intron 1 of 1)	1077	NM_030024	78004	Mm.41984	NM_030024	ENSMUSG00000045725	Prr15	E130201N16Rik|G90	proline rich 15	protein-coding
unique_peak2-34305-1-4--1.94898510510411-1.10720996964787	chr13	89740592	89740978	+	0	NA	intron (NM_013500, intron 2 of 4)	intron (NM_013500, intron 2 of 4)	60544	NM_013500	12950	Mm.266790	NM_013500	ENSMUSG00000021613	Hapln1	BB099155|CLP|Crtl1|Crtl1l|LP|LP-1	hyaluronan and proteoglycan link protein 1	protein-coding
common_peak1-13046-191-179-0.869136168951806-10.0636449236778	chr19	5808627	5813542	+	0	NA	Intergenic	Intergenic	-8413	NR_002847	72289	Mm.298256	NR_002847	ENSMUSG00000092341	Malat1	2210401K01Rik|9430072K23Rik|AI647968|Neat2	metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)	ncRNA
common_peak1-16872-116-129-0.471761520480967-2.13725206075847	chr6	65042282	65043735	+	0	NA	intron (NM_007958, intron 12 of 23)	RLTR1C|LTR|ERV1	49808	NM_001253392	13990	Mm.99113	NM_007958	ENSMUSG00000029920	Smarcad1	AV081750|AW226546|D6Pas1|Etl1|mKIAA1122	SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1	protein-coding
unique_peak2-38946-7-22--1.72447112575882-2.07034318903805	chr8	26977174	26977784	+	0	NA	intron (NM_008432, intron 7 of 26)	intron (NM_008432, intron 7 of 26)	17384	NM_008432	16532	Mm.289679	NM_008432	ENSMUSG00000031576	Kcnu1	Kcnma3|Slo3|mSlo3	potassium channel, subfamily U, member 1	protein-coding
unique_peak2-34783-7-5-0.214128329577033-1.01466476204226	chr15	61447618	61448028	+	0	NA	Intergenic	Intergenic	158183	NR_040350	432956	Mm.404918	NR_040350		D030024E09Rik	-	RIKEN cDNA D030024E09 gene	ncRNA
common_peak2-27834-35-25-0.730930540321412-1.34810744351377	chr3	146875229	146876171	+	0	NA	Intergenic	MTD|LTR|MaLR	360369	NM_027594	70892	Mm.187793	NM_027594	ENSMUSG00000036745	Ttll7	1110049N09Rik|4921517B04Rik|C630030B20|Ttll7s	tubulin tyrosine ligase-like family, member 7	protein-coding
unique_peak2-35101-3-7--1.41398308995928-1.23214870625617	chr16	20976927	20977384	+	0	NA	Intergenic	RMER13A|LTR|ERVK	176862	NM_025634	66561	Mm.422867	NM_025634		2310042E22Rik	-	RIKEN cDNA 2310042E22 gene	protein-coding
common_peak1-8836-16-8-0.948338640825749-1.02063122982878	chr11	26386896	26387746	+	0	NA	intron (NM_027260, intron 9 of 12)	intron (NM_027260, intron 9 of 12)	100237	NR_102382	67030	Mm.18875	NM_025923		Fancl	2010322C19Rik|AW554273|B230118H11Rik|Phf9|Pog|gcd	Fanconi anemia, complementation group L	protein-coding
unique_peak2-36771-4-6--0.830815435910851-0.989110657569874	chr3	68056623	68057011	+	0	NA	intron (NM_001113420, intron 1 of 6)	intron (NM_001113420, intron 1 of 6)	188093	NM_001113420	30953	Mm.331064	NM_013928	ENSMUSG00000027777	Schip1	Nf2ip|Schip-1	schwannomin interacting protein 1	protein-coding
common_peak2-22457-27-67--1.0959168903551-3.04692638843303	chr13	44729562	44730660	+	0	NA	Intergenic	Intergenic	-96032	NM_021878	16468	Mm.25059	NM_021878	ENSMUSG00000038518	Jarid2	Jmj|jumonji	jumonji, AT rich interactive domain 2	protein-coding
unique_peak2-39059-8-8--0.164702583494742-1.00793137938329	chr8	71272739	71273151	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-13900	NM_172753	234356	Mm.334569	NM_172753	ENSMUSG00000036356	Csgalnact1	4732435N03Rik|CSGalNAcT-1	chondroitin sulfate N-acetylgalactosaminyltransferase 1	protein-coding
common_peak1-15478-6-7--0.434601889619698-0.97990265578305	chr4	108165377	108165903	+	0	NA	intron (NM_175472, intron 5 of 30)	L3|LINE|CR1	33609	NM_175472	230594	Mm.25181	NM_175472	ENSMUSG00000034610	Zcchc11	6030404K05Rik|9230115F04Rik|PPAPD3|mKIAA0191	zinc finger, CCHC domain containing 11	protein-coding
unique_peak2-39432-7-6--0.00826409175941478-0.97990265578305	chr9	44495045	44495478	+	0	NA	TTS (NM_021481)	TTS (NM_021481)	13945	NM_021481	58866	Mm.45380	NM_021481	ENSMUSG00000032098	Treh	2210412M19Rik	trehalase (brush-border membrane glycoprotein)	protein-coding
unique_peak1-387-11-5-0.923731083530457-1.477227296591	chr1	153152299	153152963	+	0	NA	Intergenic	ORR1A1|LTR|MaLR	-38997	NM_001039512	117198	Mm.33764	NM_028582	ENSMUSG00000023150	Ivns1abp	1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850	influenza virus NS1A binding protein	protein-coding
common_peak1-13338-59-71-0.155438999430266-0.417582018066374	chr19	43929353	43931568	+	0	NA	intron (NM_028029, intron 11 of 15)	intron (NM_028029, intron 11 of 15)	17167	NR_033472	100038628	Mm.212585	NR_033472	ENSMUSG00000074828	Gm10768	ENSMUSG00000074828	predicted gene 10768	ncRNA
unique_peak1-4642-13-7-0.778472030637769-0.817533494790411	chr3	88149536	88150030	+	0	NA	intron (NM_178246, intron 5 of 21)	B1_Mus1|SINE|Alu	9601	NM_178246	229512	Mm.439830	NM_173188	ENSMUSG00000001415	Smg5	BC024683|mKIAA1089	Smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans)	protein-coding
unique_peak1-3692-18-7-1.31291915122835-1.71830443967823	chr19	43555290	43556250	+	0	NA	intron (NM_031396, intron 6 of 10)	intron (NM_031396, intron 6 of 10)	40844	NM_031396	83674	Mm.329864	NM_031396	ENSMUSG00000025189	Cnnm1	AI846314|Acdp1|CLP-1	cyclin M1	protein-coding
unique_peak1-4090-15-1-3.01216475055566-4.18809100057339	chr2	71724183	71724912	+	0	NA	intron (NM_172665, intron 6 of 10)	intron (NM_172665, intron 6 of 10)	13266	NM_172665	228026	Mm.34411	NM_172665	ENSMUSG00000006494	Pdk1	B830012B01|D530020C15Rik	pyruvate dehydrogenase kinase, isoenzyme 1	protein-coding
unique_peak2-36237-5-10--1.16381195464315-1.33892459842472	chr2	38536977	38537412	+	0	NA	Intergenic	Intergenic	32868	NM_139051	26423	Mm.31387	NM_139051	ENSMUSG00000026751	Nr5a1	Ad4BP|ELP|ELP-3|Ftz-F1|Ftzf1|SF-1|SF1	nuclear receptor subfamily 5, group A, member 1	protein-coding
common_peak1-7561-21-24--0.0743669245084888-0.301029995663979	chr1	42851195	42851841	+	0	NA	Intergenic	L1MB1|LINE|L1	-56560	NM_023514	69527	Mm.252982	NM_023514	ENSMUSG00000060679	Mrps9	2310002A08Rik|AW322516|Mrp-S9|S9mt|mg637	mitochondrial ribosomal protein S9	protein-coding
common_peak1-14974-12-27--1.15857893696997-1.38791538138627	chr3	106547897	106548396	+	0	NA	Intergenic	L1Md_F2|LINE|L1	23546	NM_001286685	321000	Mm.259638	NM_028081	ENSMUSG00000056260	Lrif1	2010012G17Rik|4933421E11Rik|AI450568	ligand dependent nuclear receptor interacting factor 1	protein-coding
common_peak2-21689-12-17--0.521149016354673-0.417187467413082	chr11	104663783	104664640	+	0	NA	Intergenic	Lx7|LINE|L1	194897	NM_016780	16416	Mm.87150	NM_016780	ENSMUSG00000020689	Itgb3	CD61|GP3A|INGRB3	integrin beta 3	protein-coding
common_peak2-24859-9-9--0.132314688483142-1.03275496310833	chr17	78403399	78403918	+	0	NA	Intergenic	Intergenic	-195930	NM_015800	50766	Mm.311912	NM_015800	ENSMUSG00000024074	Crim1	AU015004	cysteine rich transmembrane BMP regulator 1 (chordin like)	protein-coding
unique_peak1-2414-7-5-0.214128329577033-1.01466476204226	chr15	99567199	99567706	+	0	NA	intron (NM_028015, intron 9 of 9)	intron (NM_028015, intron 9 of 9)	11403	NM_183256	66379	Mm.5265	NM_183256	ENSMUSG00000023020	Cox14	2310016M24Rik|AA959804	cytochrome c oxidase assembly protein 14	protein-coding
common_peak1-16726-56-50-0.563170483467748-1.39412279883297	chr6	30390439	30391735	+	0	NA	intron (NM_029742, intron 3 of 9)	intron (NM_029742, intron 3 of 9)	39178	NM_029742	76788	Mm.277308	NM_029742	ENSMUSG00000029775	Klhdc10	2410127E18Rik|AI593221|mKIAA0265	kelch domain containing 10	protein-coding
common_peak1-18090-22-14-0.740393509478886-0.983972868822056	chr8	94682317	94683351	+	0	NA	Intergenic	Intergenic	197185	NR_110452	71296	Mm.86664	NR_033641	ENSMUSG00000031736	Crnde	4933436C20Rik	colorectal neoplasia differentially expressed (non-protein coding)	ncRNA
common_peak2-23823-79-70-0.679088047671938-2.60808561743764	chr15	101319176	101320991	+	0	NA	exon (NM_001201323, exon 2 of 9)	exon (NM_001201323, exon 2 of 9)	1860	NM_001201323	100126226	Mm.347934	NM_001201323	ENSMUSG00000067613	5430421N21Rik	-	RIKEN cDNA 5430421N21 gene	protein-coding
common_peak2-24315-261-481--0.0078843331426306-0.301934776488924	chr17	46855668	46858880	+	0	NA	intron (NM_145488, intron 3 of 16)	intron (NM_145488, intron 3 of 16)	8840	NM_010321	14711	Mm.29395	NM_010321	ENSMUSG00000002769	Gnmt	-	glycine N-methyltransferase	protein-coding
unique_peak2-33128-5-6--0.511735258063458-0.947717972411649	chr10	81548834	81549115	+	0	NA	Intergenic	ORR1B1|LTR|MaLR	38102	NM_001024626	408062	Mm.391409	NM_001024626		Zfp873	-	zinc finger protein 873	protein-coding
common_peak1-8255-10-20--1.03590207776999-1.03889213727317	chr10	20090952	20091441	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	23571	NM_027930	71804	Mm.262151	NM_027930	ENSMUSG00000019992	Mtfr2	2610016C23Rik|4933412C16Rik|Dufd1|Fam54a	mitochondrial fission regulator 2	protein-coding
common_peak1-9231-9-29--1.7172771892043-2.70611768348013	chr11	84870781	84871362	+	0	NA	intron (NM_001029934, intron 6 of 33)	intron (NM_001029934, intron 6 of 33)	82386	NM_001029934	237898	Mm.178524	NM_001029934	ENSMUSG00000000804	Usp32	2900074J03Rik|6430526O11Rik|AW045245	ubiquitin specific peptidase 32	protein-coding
common_peak2-21321-31-40--0.13231333380496-0.326417267106726	chr11	75486741	75487726	+	0	NA	3' UTR (NM_008659, exon 32 of 32)	3' UTR (NM_008659, exon 32 of 32)	-5528	NM_001277219	12928	Mm.280125	NM_133656		Crk	Crk-I|Crk-II|Crk-III|Crk3|CrkIII|Crko|c-Crk|p38	v-crk sarcoma virus CT10 oncogene homolog (avian)	protein-coding
common_peak2-27943-23-55--1.08558741754852-2.60642808470051	chr4	32238330	32239508	+	0	NA	Intergenic	Intergenic	187837	NM_172688	26409	Mm.258589	NM_009316	ENSMUSG00000028284	Map3k7	B430101B05|C87327|Tak1	mitogen-activated protein kinase kinase kinase 7	protein-coding
unique_peak2-37524-4-7--1.02346051385325-1.09384600808989	chr5	23419451	23419805	+	0	NA	Intergenic	MTE-int|LTR|MaLR	61577	NR_028536	100217436		NR_028536		Snord93	Gm22397|MBII-336	small nucleolar RNA, C/D box 93	snoRNA
common_peak2-26011-13-19--0.543456064249594-0.466170754204149	chr19	56397107	56397690	+	0	NA	intron (NM_198059, intron 38 of 40)	intron (NM_198059, intron 38 of 40)	34970	NM_146101	226243	Mm.25791	NM_146101	ENSMUSG00000025075	Habp2	AI035669|FSAP|HABP|HGFAL|PHBP	hyaluronic acid binding protein 2	protein-coding
common_peak1-11131-20-17-0.318149783148881-0.440610794044987	chr15	67039260	67040175	+	0	NA	Intergenic	Intergenic	-18614	NR_045140	69334	Mm.63770	NR_045140		1700012I11Rik	-	RIKEN cDNA 1700012I11 gene	ncRNA
unique_peak2-39041-1-7--2.62705701021674-1.80617997398389	chr8	70051327	70051865	+	0	NA	intron (NM_008674, intron 2 of 2)	intron (NM_008674, intron 2 of 2)	3843	NM_008674	17962	Mm.57193	NM_008674	ENSMUSG00000056426	Nat3	-	N-acetyltransferase 3	protein-coding
common_peak1-14991-18-13-0.505564229170747-0.625923329873571	chr3	108085940	108086823	+	0	NA	promoter-TSS (NM_001271599)	promoter-TSS (NM_001271599)	-601	NM_001271599	20661	Mm.157119	NM_019972	ENSMUSG00000068747	Sort1	2900053A11Rik|AI852375|Ntr3|Ntsr3	sortilin 1	protein-coding
common_peak2-20888-7-6--0.00826409175941478-0.97990265578305	chr11	3504346	3504772	+	0	NA	Intergenic	B2_Mm1a|SINE|B2	42980	NR_110490	544752	Mm.390314	NR_002321	ENSMUSG00000056579	Tug1	AI316828	taurine upregulated gene 1	ncRNA
unique_peak1-3769-36-10-2.01988946753046-5.53229495488999	chr19	55266433	55267871	+	0	NA	promoter-TSS (NR_106146)	promoter-TSS (NR_106146)	-16	NR_106146	102465990		NR_106146		Mir6715	mmu-mir-6715	microRNA mir-6715	ncRNA
unique_peak2-34819-5-9--1.02630843089322-1.21398586181642	chr15	74933639	74934196	+	0	NA	Intergenic	L1Md_F|LINE|L1	8462	NM_001099217	100041546	Mm.482110	NM_001099217	ENSMUSG00000022584	Ly6c2	Ly-6C.2|Ly-6C2	lymphocyte antigen 6 complex, locus C2	protein-coding
unique_peak2-39653-1-7--2.62705701021674-1.80617997398389	chr9	106453858	106454114	+	0	NA	intron (NM_026645, intron 6 of 7)	MT2A|LTR|ERVL	9970	NM_026645	68265	Mm.141451	NM_026645	ENSMUSG00000023577	Iqcf3	1700012F17Rik|AV040440	IQ motif containing F3	protein-coding
unique_peak1-2852-10-5-0.771452844287613-1.33892459842472	chr17	31896489	31896935	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	81836	NM_001278570	12954	Mm.1228	NM_013501	ENSMUSG00000024041	Cryaa	Acry-1|Crya-1|Crya1|DAcry-1|lop18	crystallin, alpha A	protein-coding
common_peak2-28826-29-34--0.0169929363298555-0.304177167304369	chr5	66080900	66082159	+	0	NA	intron (NM_001081321, intron 2 of 31)	intron (NM_001081321, intron 2 of 31)	7566	NM_001081321	71521	Mm.278974	NM_027818	ENSMUSG00000029202	Pds5a	9030416H16Rik|E230024D05Rik|mKIAA0648	PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	protein-coding
unique_peak1-5499-32-10-1.81966040058236-4.28341153583535	chr5	135911449	135912917	+	0	NA	intron (NM_146001, intron 13 of 30)	B1_Mur3|SINE|Alu	-41767	NM_148932	107939	Mm.28399	NM_148932	ENSMUSG00000053293	Pom121	2610027A18Rik|C80273|mKIAA0618	nuclear pore membrane protein 121	protein-coding
common_peak1-18861-10-14--0.550475250599749-0.446472590016315	chr9	21337906	21338388	+	0	NA	intron (NM_206536, intron 2 of 5)	intron (NM_206536, intron 2 of 5)	7526	NM_001198794	382062	Mm.325205	NM_206536	ENSMUSG00000057191	AB124611	Gm1706	cDNA sequence AB124611	protein-coding
common_peak2-22576-26-35--0.24202590928385-0.384630725886657	chr13	66904806	66905606	+	0	NA	Intergenic	L1Md_T|LINE|L1	101080	NM_026219	67530	Mm.379136	NM_026219	ENSMUSG00000021520	Uqcrb	2210415M14Rik|QP-C|QPC|UQBC|UQBP|UQPC	ubiquinol-cytochrome c reductase binding protein	protein-coding
common_peak1-19355-8-20--1.38709500483119-1.45476480588849	chrX	12091749	12092208	+	0	NA	Intergenic	PB1D10|SINE|Alu	-72907	NM_027439	70495	Mm.25148	NM_027439	ENSMUSG00000031007	Atp6ap2	(P)RR|5730403E06Rik|APT6M8-9|ATP6M8-9|Atp6ip2|M8-9	ATPase, H+ transporting, lysosomal accessory protein 2	protein-coding
unique_peak2-39303-6-7--0.434601889619698-0.97990265578305	chr8	123720879	123721344	+	0	NA	Intergenic	Intergenic	69526	NM_008024	14241	Mm.5111	NM_008024	ENSMUSG00000097084	Foxl1	FREAC7|Fkh6|fkh-6	forkhead box L1	protein-coding
common_peak2-27132-15-14-0.105274154947137-0.330004445983672	chr3	22075756	22076245	+	0	NA	intron (NM_030732, intron 2 of 15)	intron (NM_030732, intron 2 of 15)	-74292	NR_004439	19784		NR_004439		Rprl2	RPRH3|Rmrp3	ribonuclease P RNA-like 2	ncRNA
common_peak1-12687-12-4-1.32684789020028-2.04196296489515	chr18	38867652	38868409	+	0	NA	Intergenic	B1_Mur3|SINE|Alu	-107108	NM_011898	24066	Mm.42038	NM_011898	ENSMUSG00000024427	Spry4	A030006O18Rik|sprouty4	sprouty homolog 4 (Drosophila)	protein-coding
common_peak2-29376-47-64--0.0875263882619066-0.316666098280086	chr6	128842564	128843888	+	0	NA	intron (NM_001289706, intron 3 of 6)	intron (NM_001289706, intron 3 of 6)	-2084	NM_001254947	232406	Mm.30745	NM_001254946	ENSMUSG00000090164	BC035044	-	cDNA sequence BC035044	protein-coding
common_peak2-29807-7-8--0.370834171144123-1.00793137938329	chr6	91156594	91157088	+	0	NA	Intergenic	Intergenic	-5917	NM_001081437	14115	Mm.249146	NM_007992	ENSMUSG00000064080	Fbln2	5730577E14Rik|FIBL-2	fibulin 2	protein-coding
common_peak2-20281-42-51-0.0418896097260921-0.319645149473567	chr1	191395768	191397197	+	0	NA	Intergenic	Intergenic	115483	NM_001081363	108000	Mm.129746	NM_001081363	ENSMUSG00000026605	Cenpf	6530404A22Rik|AI325968|CENF|Lek1|PRO1779|mitosin	centromere protein F	protein-coding
common_peak2-25809-21-21-0.110057646628938-0.344491671143527	chr19	38004738	38005643	+	0	NA	intron (NM_001099634, intron 37 of 52)	RCHARR1|DNA|MER1_type	112877	NM_001099634	226101	Mm.34674	NM_177035	ENSMUSG00000048612	Myof	2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3	myoferlin	protein-coding
common_peak2-26552-34-18-1.13414101355768-2.44513000105557	chr2	94178321	94179013	+	0	NA	intron (NM_183106, intron 17 of 24)	intron (NM_183106, intron 17 of 24)	68179	NM_183106	74569	Mm.248504	NM_183106	ENSMUSG00000027194	Ttc17	9130020K17Rik|D2Bwg1005e	tetratricopeptide repeat domain 17	protein-coding
common_peak2-24126-14-14--0.00767443525087419-0.308519316180257	chr16	33966499	33967263	+	0	NA	intron (NM_009471, intron 1 of 5)	CpG	208	NM_009471	22247	Mm.13145	NM_009471	ENSMUSG00000022814	Umps	1700095D23Rik|AA408257|AL033308|BB164745	uridine monophosphate synthetase	protein-coding
common_peak2-21577-27-35--0.178379050547076-0.330208782692001	chr11	97765935	97767146	+	0	NA	Intergenic	Intergenic	-21072	NM_001081435	72973	Mm.245939	NM_001081435		Fbxo47	2900052P03Rik|Gm1562	F-box protein 47	protein-coding
unique_peak2-39759-6-15--1.4346018896197-1.16633110333236	chrX	130695154	130695823	+	0	NA	intron (NM_183319, intron 1 of 2)	intron (NM_183319, intron 1 of 2)	979	NM_183319	331524	Mm.235055	NM_183319	ENSMUSG00000031258	Xkrx	A630026F04	X Kell blood group precursor related X linked	protein-coding
unique_peak2-38838-7-6--0.00826409175941478-0.97990265578305	chr7	142455000	142455397	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-5104	NM_001163611	100043254	Mm.192092	NM_001163611	ENSMUSG00000073804	Nps	ENSMUSG00000073804	neuropeptide S	protein-coding
unique_peak2-33979-9-7-0.18961340640422-1.05908390183068	chr12	85270273	85270800	+	0	NA	Intergenic	Intergenic	-7652	NR_073564	18222	Mm.4390	NM_010949	ENSMUSG00000021224	Numb	Nb	numb gene homolog (Drosophila)	protein-coding
unique_peak1-2190-10-1-2.35641534500877-2.57096726280955	chr15	64558625	64559156	+	0	NA	intron (NM_001291903, intron 11 of 16)	intron (NM_001291903, intron 11 of 16)	194968	NM_001291903	11514	Mm.1425	NM_009623	ENSMUSG00000022376	Adcy8	AC8|AW060868	adenylate cyclase 8	protein-coding
common_peak1-7741-25-15-0.861849905345106-1.28534286439186	chr1	89568573	89569848	+	0	NA	intron (NR_122078, intron 5 of 27)	PB1D10|SINE|Alu	52323	NM_001110193	16331	Mm.15105	NM_010566	ENSMUSG00000026288	Inpp5d	SHIP|SHIP-1|SHIP1|SIP-145|p150Ship|s-SHIP	inositol polyphosphate-5-phosphatase D	protein-coding
unique_peak2-38118-0-16--4.92759377172455-4.18809100057339	chr6	73289548	73290200	+	0	NA	Intergenic	Lx8|LINE|L1	91375	NM_019879	56451	Mm.29845	NM_019879	ENSMUSG00000052738	Suclg1	1500000I01Rik|Sucla1	succinate-CoA ligase, GDP-forming, alpha subunit	protein-coding
unique_peak2-35576-1-7--2.62705701021674-1.80617997398389	chr17	70988224	70988623	+	0	NA	intron (NM_001128180, intron 2 of 9)	intron (NM_001128180, intron 2 of 9)	77336	NM_001128181	224997	Mm.311840	NM_027712	ENSMUSG00000003279	Dlgap1	4933422O14Rik|9630002F18|AI845682|AI848168|BB075781|D17Bwg0511e|GKAP/SAPAP|GKPA/SAPAP|Gkap|Sapap1|mKIAA4162	discs, large (Drosophila) homolog-associated protein 1	protein-coding
common_peak2-25687-59-86--0.11757949497615-0.348132427537962	chr19	14596651	14597865	+	0	NA	intron (NM_011600, intron 6 of 19)	L1_Mm|LINE|L1	75215	NM_011600	21888	Mm.103638	NM_011600	ENSMUSG00000024642	Tle4	5730411M05Rik|AA792082|Bce-1|Bce1|ESTM13|ESTM14|Grg4|X83332|X83333	transducin-like enhancer of split 4, homolog of Drosophila E(spl)	protein-coding
common_peak2-30688-36-59--0.427569509440764-0.711514064421841	chr7	109959555	109960783	+	0	NA	Intergenic	Intergenic	8175	NM_146359	258356	Mm.457775	NM_146359	ENSMUSG00000048469	Olfr564	MOR14-10	olfactory receptor 564	protein-coding
common_peak2-29880-10-9-0.0344872501214071-1.05503135781948	chr6	112210764	112211275	+	0	NA	Intergenic	Intergenic	-12733	NM_144799	30937	Mm.234441	NM_144799	ENSMUSG00000057604	Lmcd1	AW455500|AW553074|dyxin	LIM and cysteine-rich domains 1	protein-coding
common_peak2-25740-17-12-0.517856620063946-0.647240723060192	chr19	24999205	24999914	+	0	NA	intron (NR_033744, intron 11 of 14)	Tigger7|DNA|MER2_type	17222	NR_034047	100217439		NR_034047		Snora19	MBI-51	small nucleolar RNA, H/ACA box 19	snoRNA
unique_peak1-6780-10-5-0.771452844287613-1.33892459842472	chr8	64583204	64583672	+	0	NA	intron (NM_011922, intron 1 of 10)	L1Md_A|LINE|L1	18552	NM_001136089	26359	Mm.42179	NM_011922	ENSMUSG00000031635	Anxa10	-	annexin A10	protein-coding
common_peak1-17925-37-72--0.663831487394199-1.55529262229468	chr7	126799466	126800686	+	0	NA	intron (NM_054094, intron 10 of 13)	intron (NM_054094, intron 10 of 13)	-33464	NM_178414	233801	Mm.240412	NM_178414	ENSMUSG00000047026	Acsm4	O-MACS|OMACS	acyl-CoA synthetase medium-chain family member 4	protein-coding
common_peak2-25919-12-8-0.478850983645327-0.562038191119709	chr19	46458630	46459122	+	0	NA	intron (NM_016860, intron 3 of 10)	intron (NM_016860, intron 3 of 10)	11349	NM_016860	54130	Mm.3118	NM_016860	ENSMUSG00000025228	Actr1a	Arp1|alpha-Arp1	ARP1 actin-related protein 1A, centractin alpha	protein-coding
unique_peak1-1185-7-2-1.21412832957703-1.45399745587252	chr11	100999802	101000219	+	0	NA	Intergenic	Intergenic	-17188	NM_134028	103768	Mm.142348	NM_134028	ENSMUSG00000045007	Tubg2	AI504772|Tubgl	tubulin, gamma 2	protein-coding
common_peak1-13822-35-56--0.401519755702237-0.672788403510108	chr2	57116283	57117758	+	0	NA	intron (NM_010274, intron 1 of 16)	intron (NM_010274, intron 1 of 16)	26227	NM_010274	14571	Mm.3711	NM_010274	ENSMUSG00000026827	Gpd2	AA408484|AI448216|AU021455|AW494132|GPDH|Gdm1|Gpd-m|Gpdh-m|TISP38	glycerol phosphate dehydrogenase 2, mitochondrial	protein-coding
common_peak2-19991-68-70-0.420213659793614-1.1267337883649	chr1	134093083	134094083	+	0	NA	intron (NM_001033250, intron 1 of 3)	intron (NM_001033250, intron 1 of 3)	-1082	NR_029777	723818		NR_029777	miRBase:MI0000646	Mir135b	Mirn135b	microRNA 135b	ncRNA
common_peak2-25581-28-46--0.501629731856175-0.767679714496325	chr19	7217069	7217715	+	0	NA	intron (NM_134147, intron 3 of 10)	intron (NM_134147, intron 3 of 10)	-37173	NM_201411	396184	Mm.386930	NM_201411	ENSMUSG00000047787	Flrt1	AW742165|D630040I23Rik	fibronectin leucine rich transmembrane protein 1	protein-coding
common_peak1-18887-20-16-0.400611943340854-0.507611860039817	chr9	35094675	35095601	+	0	NA	Intergenic	Intergenic	6448	NR_040715	71133	Mm.158577	NR_040715		4933422A05Rik	-	RIKEN cDNA 4933422A05 gene	ncRNA
unique_peak2-35652-1-6--2.43441193227435-1.56314192529759	chr18	84377483	84377832	+	0	NA	3' UTR (NM_001033341, exon 9 of 9)	3' UTR (NM_001033341, exon 9 of 9)	120107	NM_146090	225791	Mm.147052	NM_146090	ENSMUSG00000049090	Zadh2	C530046K17Rik|Pthr3	zinc binding alcohol dehydrogenase, domain containing 2	protein-coding
unique_peak2-37549-2-9--2.23938235115068-1.87199725847353	chr5	31599907	31600323	+	0	NA	intron (NM_144909, intron 1 of 18)	intron (NM_144909, intron 1 of 18)	161	NM_144909	231103	Mm.100043	NM_144909	ENSMUSG00000059434	Gckr	GKRP	glucokinase regulatory protein	protein-coding
common_peak1-9584-27-15-0.991545950895236-1.66700866096458	chr11	118428523	118429604	+	0	NA	intron (NM_001285436, intron 3 of 13)	intron (NM_001285436, intron 3 of 13)	90789	NM_172573	217364	Mm.473963	NM_172573	ENSMUSG00000033857	Engase	C130099A03|D230014K01Rik	endo-beta-N-acetylglucosaminidase	protein-coding
common_peak2-31497-40-74--0.569843007744782-1.22525406874156	chr8	106892745	106894010	+	0	NA	intron (NM_153582, intron 1 of 3)	MIR|SINE|MIR	26330	NM_153582	97487	Mm.29658	NM_153582	ENSMUSG00000096188	Cmtm4	Cklfsf4|D19397|ENSMUSG00000051554|Gm9853	CKLF-like MARVEL transmembrane domain containing 4	protein-coding
unique_peak2-37988-5-12--1.40482005414695-1.62698961692433	chr6	17612106	17612717	+	0	NA	intron (NM_007604, intron 8 of 9)	L1MB8|LINE|L1	25313	NM_007604	12343	Mm.392504	NM_007604		Capza2	1110053K06Rik|AW208808|Cappa2	capping protein (actin filament) muscle Z-line, alpha 2	protein-coding
common_peak1-18877-60-132--0.700990573880659-2.86139638566604	chr9	25150735	25152067	+	0	NA	Intergenic	L1Md_F2|LINE|L1	91361	NM_001205367	235072	Mm.270259	NM_009859	ENSMUSG00000001833	Sept7	Cdc10|E430034N22	septin 7	protein-coding
common_peak2-25153-8-7-0.00522241794757061-1.00793137938329	chr18	46908709	46909045	+	0	NA	intron (NM_009681, intron 1 of 5)	B3|SINE|B2	7306	NM_009681	11777	Mm.312536	NM_009681	ENSMUSG00000024480	Ap3s1	[s]3A	adaptor-related protein complex 3, sigma 1 subunit	protein-coding
common_peak1-15410-13-18--0.469455482805817-0.409888142029227	chr4	86674525	86675173	+	0	NA	intron (NM_172426, intron 6 of 10)	intron (NM_172426, intron 6 of 10)	154531	NM_139306	230379	Mm.45019	NM_139306	ENSMUSG00000038007	Acer2	2410116I05Rik|Asah3l|CRG-L1|maCER2	alkaline ceramidase 2	protein-coding
common_peak2-20168-13-11-0.193509529916613-0.379391706698377	chr1	171183639	171184122	+	0	NA	Intergenic	MTD|LTR|MaLR	277715	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
unique_peak1-714-9-1-2.18961340640422-2.31132995230379	chr10	87679854	87680364	+	0	NA	intron (NM_001122960, intron 4 of 6)	B1_Mur4|SINE|Alu	16267	NM_027487	67282	Mm.208465	NM_026070	ENSMUSG00000020056	Ccdc53	2900091E11Rik|5730495F03Rik	coiled-coil domain containing 53	protein-coding
common_peak1-9818-45-30-0.906161714957997-2.2696557331197	chr12	70706456	70707714	+	0	NA	intron (NM_001135559, intron 14 of 22)	intron (NM_001135559, intron 14 of 22)	-23070	NM_001033236	207965	Mm.102487	NM_001033236	ENSMUSG00000049882	Vcpkmt	Gm71|Mettl21d|Mettl221d|VCP-KMT	valosin containing protein lysine (K) methyltransferase	protein-coding
unique_peak2-37590-2-11--2.50241675698448-2.32232533660526	chr5	43208640	43209105	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-415830	NM_175937	231207	Mm.7233	NM_175937	ENSMUSG00000039782	Cpeb2	A630055H10Rik|Cpe-bp2	cytoplasmic polyadenylation element binding protein 2	protein-coding
unique_peak2-39112-7-11--0.785871670422967-1.21681515183528	chr8	80879192	80879835	+	0	NA	intron (NM_183096, intron 12 of 13)	intron (NM_183096, intron 12 of 13)	81038	NM_138944	18997	Mm.234261	NM_138944	ENSMUSG00000031688	Pou4f2	Brn-3.2|Brn-3b|Brn3b|Pou4f-rs1|mBrn3-3R	POU domain, class 4, transcription factor 2	protein-coding
common_peak2-20073-23-29--0.185123091099438-0.336580821310529	chr1	153185520	153186538	+	0	NA	Intergenic	Intergenic	-5599	NM_001039512	117198	Mm.33764	NM_028582	ENSMUSG00000023150	Ivns1abp	1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850	influenza virus NS1A binding protein	protein-coding
unique_peak2-39541-9-17--0.980311595038092-0.844317084070804	chr9	67042055	67042705	+	0	NA	Intergenic	Intergenic	42153	NR_029576	387185		NR_029576		Mir190a	Mir190|Mirn190|mir-190|mmu-mir-190|mmu-mir-190a	microRNA 190a	ncRNA
unique_peak1-6134-13-3-1.77847203063777-2.58603100924543	chr6	134601473	134602045	+	0	NA	intron (NM_026371, intron 2 of 3)	intron (NM_026371, intron 2 of 3)	10801	NM_026371	67774	Mm.41892	NM_026371	ENSMUSG00000042992	Loh12cr1	5830457J20Rik|AW124643	loss of heterozygosity, 12, chromosomal region 1 homolog (human)	protein-coding
common_peak1-10412-103-64-1.26562993283159-8.91759493911927	chr13	98475427	98478090	+	0	NA	Intergenic	Intergenic	146803	NR_046157	328314	Mm.138047	NR_046157		Gm5086	B230311A21|EG328314	predicted gene 5086	ncRNA
common_peak2-20627-24-30--0.160986407619158-0.316008636696545	chr10	80433201	80434278	+	0	NA	intron (NM_010319, intron 2 of 3)	intron (NM_010319, intron 2 of 3)	30371	NM_001038655	14708	Mm.222496	NM_010319	ENSMUSG00000048240	Gng7	AI840417	guanine nucleotide binding protein (G protein), gamma 7	protein-coding
common_peak1-16383-37-26-0.771105569322351-1.52341724501298	chr5	123394693	123395740	+	0	NA	intron (NM_001003953, intron 8 of 22)	ID|SINE|ID	43326	NM_001005866	30841	Mm.86406	NM_013910	ENSMUSG00000029475	Kdm2b	Cxxc2|E430001G17|Fbl10|Fbxl10|Jhdm1b|PCCX2|mKIAA3014	lysine (K)-specific demethylase 2B	protein-coding
unique_peak1-2503-8-5-0.420259917226415-1.10484139239135	chr16	13588523	13589050	+	0	NA	intron (NM_028761, intron 21 of 23)	intron (NM_028761, intron 21 of 23)	-68274	NR_037997	70100	Mm.158330	NR_037997		2310015D24Rik	-	RIKEN cDNA 2310015D24 gene	ncRNA
unique_peak2-38495-6-11--1.01956439034085-1.32595962126035	chr7	35586294	35586831	+	0	NA	intron (NM_175140, intron 1 of 3)	B1_Mur4|SINE|Alu	11168	NM_175140	68947	Mm.29380	NM_175140	ENSMUSG00000060402	Chst8	1500011J21Rik|AI426009	carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8	protein-coding
unique_peak1-6857-9-5-0.604650905683064-1.21398586181642	chr8	86477929	86478594	+	0	NA	Intergenic	Charlie5|DNA|MER1_type	-1332	NM_024184	66929	Mm.29680	NM_024184	ENSMUSG00000005470	Asf1b	1700003K02Rik|AA409591	anti-silencing function 1B histone chaperone	protein-coding
unique_peak2-35422-12-14--0.25811461052088-0.309074325783021	chr17	34592295	34592872	+	0	NA	intron (NM_001001177, intron 19 of 19)	intron (NM_001001177, intron 19 of 19)	20299	NM_030746	632126	Mm.484958	NM_030746	ENSMUSG00000058435	Btnl4	Btn3a3|EG632126|NG11	butyrophilin-like 4	protein-coding
common_peak2-22545-129-172-0.243892094329345-0.929083717928937	chr13	58401185	58403553	+	0	NA	intron (NM_175214, intron 13 of 16)	MTC-int|LTR|MaLR	12141	NR_105788	102465191		NR_105788		Mir6369	mmu-mir-6369	microRNA mir-6369	ncRNA
common_peak2-23319-11-6-0.701338662194009-1.32595962126035	chr15	36873907	36874290	+	0	NA	Intergenic	B4|SINE|B4	63059	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
common_peak1-18419-37-68--0.58253138529235-1.22876277037648	chr8	75033366	75034882	+	0	NA	intron (NM_027485, intron 1 of 2)	intron (NM_027485, intron 1 of 2)	-17611	NM_177766	270066	Mm.291461	NM_177766	ENSMUSG00000019731	Slc35e1	6030458H05|AA408278	solute carrier family 35, member E1	protein-coding
common_peak2-23502-8-9--0.316705676939792-1.03275496310833	chr15	76264923	76265404	+	0	NA	exon (NM_001162489, exon 27 of 31)	exon (NM_001162489, exon 27 of 31)	1519	NR_105919	102465576		NR_105919		Mir6954	mmu-mir-6954	microRNA mir-6954	ncRNA
unique_peak2-36532-3-7--1.41398308995928-1.23214870625617	chr2	163685991	163686469	+	0	NA	Intergenic	RMER17D|LTR|ERVK	6744	NM_001030292	241769	Mm.295337	NM_001030292	ENSMUSG00000035238	Kcnk15	KCNK11|KCNK14|KT3.3|TASK5	potassium channel, subfamily K, member 15	protein-coding
common_peak1-10580-16-12-0.417823924126969-0.489164546851866	chr14	26636991	26637759	+	0	NA	Intergenic	ORR1C2|LTR|MaLR	-24266	NM_013469	11744	Mm.294083	NM_013469	ENSMUSG00000021866	Anxa11	A830099O17Rik|Anx11	annexin A11	protein-coding
common_peak1-16242-8-19--1.31670567693979-1.30305656033811	chr5	103910761	103911193	+	0	NA	intron (NM_011204, intron 3 of 47)	ORR1B1-int|LTR|MaLR	56766	NM_011204	19249	Mm.3414	NM_011204	ENSMUSG00000034573	Ptpn13	AI324989|PTP-BL|PTPL1|Ptpri|RIP	protein tyrosine phosphatase, non-receptor type 13	protein-coding
common_peak2-21793-27-13-1.18419102883763-2.09887956687855	chr11	118009278	118010195	+	0	NA	Intergenic	Intergenic	-19203	NM_001167746	69926	Mm.473893	NM_001167746	ENSMUSG00000033987	Dnah17	2810003K23Rik|Dnahc17|Dnahcl1|Gm1178|mKIAA3028	dynein, axonemal, heavy chain 17	protein-coding
unique_peak2-37859-12-17--0.521149016354673-0.417187467413082	chr5	136199161	136199741	+	0	NA	intron (NM_008898, intron 2 of 15)	RLTR18B|LTR|ERVK	12308	NR_106001	102466791		NR_106001		Mir7034	mmu-mir-7034	microRNA mir-7034	ncRNA
unique_peak1-2820-10-2-1.77145284428761-2.09384600808989	chr17	26582072	26582714	+	0	NA	3' UTR (NM_001081656, exon 5 of 5)	3' UTR (NM_001081656, exon 5 of 5)	30483	NM_001081656	240055	Mm.133211	NM_001081656	ENSMUSG00000034413	Neurl1b	C230078M08Rik|EG240055	neuralized homolog 1b (Drosophila)	protein-coding
common_peak1-16769-24-34--0.33607311417725-0.427313034957882	chr6	35252292	35253442	+	0	NA	intron (NM_172892, intron 1 of 15)	intron (NM_172892, intron 1 of 15)	5259	NM_172892	243755	Mm.23666	NM_172892	ENSMUSG00000029843	Slc13a4	9630060C05Rik|SUT-1|SUT1	solute carrier family 13 (sodium/sulfate symporters), member 4	protein-coding
common_peak2-23266-9-8-0.0196884049619079-1.03275496310833	chr15	25766844	25767453	+	0	NA	Intergenic	Intergenic	-5905	NM_001034851	66270	Mm.25311	NM_025459	ENSMUSG00000022270	Fam134b	1810015C04Rik|AU015349	family with sequence similarity 134, member B	protein-coding
unique_peak1-4788-15-6-1.20480982849805-1.32521814697968	chr3	131493032	131493520	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-254980	NM_020265	56811	Mm.103593	NM_020265	ENSMUSG00000028031	Dkk2	-	dickkopf homolog 2 (Xenopus laevis)	protein-coding
common_peak1-11226-74-109--0.0654731365460526-0.317266248900613	chr15	79326976	79328467	+	0	NA	intron (NM_008427, intron 1 of 1)	B1F|SINE|Alu	7950	NM_008427	16520	Mm.140760	NM_008427	ENSMUSG00000044216	Kcnj4	IRK3|Kcnf2|MB-IRK3	potassium inwardly-rectifying channel, subfamily J, member 4	protein-coding
unique_peak2-35850-3-4--0.73591118484664-0.864171920961574	chr18	75298996	75299383	+	0	NA	intron (NM_027727, intron 13 of 16)	B1_Mus1|SINE|Alu	120763	NM_027727	69190	Mm.173826	NM_027727	ENSMUSG00000035765	Dym	1810041M12Rik|4933427L07Rik|C030019K18Rik	dymeclin	protein-coding
common_peak2-22829-6-8--0.60452689106201-1.03789460276074	chr14	20478417	20478804	+	0	NA	Intergenic	(TA)n|Simple_repeat|Simple_repeat	-56801	NM_001024706	432825	Mm.327147	NM_001024706	ENSMUSG00000095024	Gm5458	EG432825	predicted gene 5458	protein-coding
common_peak2-23939-6-5--0.0195643903408542-0.947717972411649	chr16	13387807	13388211	+	0	NA	intron (NM_001122667, intron 8 of 16)	MTEa|LTR|MaLR	29495	NM_153588	239719	Mm.270643	NM_153588	ENSMUSG00000009569	Mkl2	ENSMUSG00000075401|Gt4-1|MRTF-B|Mrtfb|mKIAA1243	MKL/myocardin-like 2	protein-coding
unique_peak1-621-8-3-1.00522241794757-1.39487600375387	chr10	24444437	24444909	+	0	NA	Intergenic	Intergenic	-12765	NM_008813	18605	Mm.27254	NM_008813	ENSMUSG00000037370	Enpp1	4833416E15Rik|AI428932|C76301|CD203c|E-NPP1|Ly-41|M6S1|NPP1|Npps|PC-1|Pca|Pca-1|Pdnp1|ttw|twy	ectonucleotide pyrophosphatase/phosphodiesterase 1	protein-coding
common_peak1-15648-12-17--0.521149016354673-0.417187467413082	chr4	135352613	135353352	+	0	NA	exon (NM_001085509, exon 23 of 37)	exon (NM_001085509, exon 23 of 37)	37352	NM_001085509	242702	Mm.318639	NM_001085509	ENSMUSG00000037139	Myom3	8430427K15Rik|Gm434	myomesin family, member 3	protein-coding
unique_peak2-34928-6-6--0.241956811677302-0.947717972411649	chr15	85679432	85679911	+	0	NA	intron (NM_001033337, intron 9 of 13)	B2_Mm1t|SINE|B2	-10466	NM_001168672	29870	Mm.20858	NM_013882	ENSMUSG00000022385	Gtse1	B99|Gtse-1	G two S phase expressed protein 1	protein-coding
unique_peak2-33126-5-5--0.289342836727009-0.909929411522249	chr10	81495975	81496349	+	0	NA	Intergenic	Intergenic	-14710	NM_001024626	408062	Mm.391409	NM_001024626		Zfp873	-	zinc finger protein 873	protein-coding
common_peak1-10878-18-11-0.727956650507195-0.876666802405043	chr15	75988723	75989414	+	0	NA	Intergenic	Intergenic	-32082	NM_001142968	271278	Mm.205253	NM_198172	ENSMUSG00000044361	BC024139	6230424I18Rik	cDNA sequence BC024139	protein-coding
common_peak1-10330-25-22-0.338287949288093-0.51032171069054	chr13	74208147	74209404	+	0	NA	Intergenic	Intergenic	-9042	NM_028959	74470	Mm.73234	NM_028959	ENSMUSG00000021572	Cep72	2610029E11Rik|4933440J22Rik	centrosomal protein 72	protein-coding
unique_peak1-6153-11-5-0.923731083530457-1.477227296591	chr6	135574676	135575333	+	0	NA	Intergenic	L1M5|LINE|L1	257493	NM_001288627	13730	Mm.182785	NM_010128	ENSMUSG00000030208	Emp1	I-8-09|TMP	epithelial membrane protein 1	protein-coding
common_peak1-18410-7-16--1.28837201095215-1.08658567012551	chr8	72443957	72444290	+	0	NA	intron (NM_001113346, intron 3 of 12)	intron (NM_001113346, intron 3 of 12)	-17666	NM_023312	67184	Mm.21162	NM_023312	ENSMUSG00000036199	Ndufa13	2700054G14Rik|AU022060|CDA016|CGI-39|GRIM-19|Grim19	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 13	protein-coding
unique_peak2-35406-5-14--1.61127093161437-1.95509489018123	chr17	32992912	32993663	+	0	NA	Intergenic	MTD|LTR|MaLR	-26081	NM_177359	240064	Mm.476307	NM_177359		Zfp799	6030490I01Rik	zinc finger protein 799	protein-coding
unique_peak1-475-9-1-2.18961340640422-2.31132995230379	chr1	176831591	176832075	+	0	NA	intron (NM_011825, intron 1 of 1)	intron (NM_011825, intron 1 of 1)	20117	NM_011825	23893	Mm.25760	NM_011825	ENSMUSG00000050069	Grem2	Gremlin2|Prdc	gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis)	protein-coding
common_peak1-10430-9-14--0.717277189204299-0.53895475198017	chr13	101428164	101428613	+	0	NA	intron (NM_027592, intron 2 of 4)	intron (NM_027592, intron 2 of 4)	6826	NM_001015889	108143	Mm.301148	NM_027139	ENSMUSG00000052293	Taf9	2310012M09Rik|AA673500|AU045423|TAFII31|TAFII32|Taf2g	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor	protein-coding
unique_peak1-6234-9-4-0.867685311516858-1.36011389749466	chr7	12948884	12949405	+	0	NA	Intergenic	Intergenic	-1031	NM_134233	171267	Mm.434341	NM_134233	ENSMUSG00000066803	Vmn1r84	V1rg11	vomeronasal 1 receptor 84	protein-coding
unique_peak2-38011-7-6--0.00826409175941478-0.97990265578305	chr6	31085086	31085458	+	0	NA	intron (NR_110471, intron 3 of 3)	B4A|SINE|B4	-72179	NR_029532	387223		NR_029532	miRBase:MI0000143	Mir29b-1	Mirn29b|Mirn29b-1	microRNA 29b-1	ncRNA
common_peak2-31259-18-26--0.441968350935117-0.471456499375593	chr8	70838727	70839648	+	0	NA	intron (NM_028182, intron 4 of 8)	L1_Mus1|LINE|L1	38760	NM_028182	72281	Mm.40974	NM_028182	ENSMUSG00000053886	Sh2d4a	2210402M20Rik|SH2A	SH2 domain containing 4A	protein-coding
common_peak2-29059-7-10--0.660340788339108-1.12966497611638	chr5	116023749	116024332	+	0	NA	intron (NM_172719, intron 2 of 57)	RSINE1|SINE|B4	-6918	NR_105996	102466790		NR_105996		Mir7029	mmu-mir-7029	microRNA mir-7029	ncRNA
unique_peak2-37479-5-13--1.51173525806346-1.78669045979184	chr5	3962365	3963132	+	0	NA	intron (NM_194462, intron 7 of 47)	intron (NM_194462, intron 7 of 47)	34562	NM_194462	100986	Mm.46044	NM_194462	ENSMUSG00000040407	Akap9	5730481H23Rik|AKAP-9|AKAP450|AW545847|C79026|G1-448-15|PRKA9|mKIAA0803|mei2-5|repro12	A kinase (PRKA) anchor protein (yotiao) 9	protein-coding
unique_peak1-2712-8-9--0.316705676939792-1.03275496310833	chr16	91962139	91962631	+	0	NA	Intergenic	Intergenic	-30510	NM_138597	28080	Mm.41	NM_138597	ENSMUSG00000022956	Atp5o	ATPO|D12Wsu28e|OSCP	ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	protein-coding
common_peak2-30878-7-8--0.370834171144123-1.00793137938329	chr7	141172931	141173374	+	0	NA	exon (NM_007400, exon 6 of 23)	exon (NM_007400, exon 6 of 23)	-198684	NM_001286031	101437	Mm.199223	NM_133941	ENSMUSG00000030986	Dhx32	3110079L04Rik|4732469F02Rik|AA408140|Ddx32	DEAH (Asp-Glu-Ala-His) box polypeptide 32	protein-coding
unique_peak2-39866-3-5--0.998945590680433-0.96108193396963	chrX	73685196	73685635	+	0	NA	Intergenic	L1_Mus3|LINE|L1	46726	NM_001033799	619294	Mm.423961	NM_001033799	ENSMUSG00000073085	4930428D18Rik	-	RIKEN cDNA 4930428D18 gene	protein-coding
common_peak2-27193-25-23-0.27688740462395-0.451698068655807	chr3	37639804	37641013	+	0	NA	Intergenic	Intergenic	-17126	NM_198657	381438	Mm.490549	NM_198657	ENSMUSG00000058174	Gm5148	EG381438	predicted gene 5148	protein-coding
common_peak2-23053-8-4-0.683294323060208-1.21878474469819	chr14	70176515	70176909	+	0	NA	intron (NM_020275, intron 5 of 7)	RMER6A|LTR|ERVK	9433	NM_020275	21933	Mm.193430	NM_020275	ENSMUSG00000022074	Tnfrsf10b	DR5|KILLER|Ly98|MK|TRAILR2|TRICK2A|TRICK2B|TRICKB	tumor necrosis factor receptor superfamily, member 10b	protein-coding
common_peak2-31441-23-32--0.322626614849373-0.436052471002795	chr8	104375664	104376604	+	0	NA	Intergenic	B3|SINE|B2	932877	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
common_peak2-21455-22-31--0.352715894912595-0.440892966163086	chr11	86952552	86953512	+	0	NA	intron (NM_197987, intron 3 of 23)	RMER6A|LTR|ERVK	12455	NM_197987	68729	Mm.17436	NM_197987	ENSMUSG00000018548	Trim37	1110032A10Rik|2810004E07Rik|AI848587|AU043018|MUL|TEF3|mKIAA0898	tripartite motif-containing 37	protein-coding
unique_peak2-36881-6-16--1.52206473087004-1.32521814697968	chr3	95066042	95066660	+	0	NA	intron (NM_173347, intron 4 of 7)	intron (NM_173347, intron 4 of 7)	-11236	NM_134253	171388	Mm.331209	NM_134253	ENSMUSG00000028115	Bnipl	1700128A13Rik|BNIP-S|BNIPL1|BNIPL2|PP73|PP753	BCL2/adenovirus E1B 19kD interacting protein like	protein-coding
common_peak1-13665-31-31-0.225238670813123-0.416139936131877	chr2	27505274	27506247	+	0	NA	Intergenic	Intergenic	-26961	NM_011305	20181	Mm.24624	NM_011305	ENSMUSG00000015846	Rxra	9530071D11Rik|Nr2b1|RXRalpha1	retinoid X receptor alpha	protein-coding
unique_peak2-39409-2-6--1.72480917832092-1.26211192963361	chr9	35059146	35059550	+	0	NA	intron (NM_001286604, intron 2 of 9)	B1_Mus1|SINE|Alu	16042	NM_175411	109229	Mm.24197	NM_175411	ENSMUSG00000050471	Fam118b	2310022O21Rik|2700018L24Rik|C030004A17Rik|Ppp4r1l	family with sequence similarity 118, member B	protein-coding
common_peak1-8570-38-71--0.598472342143782-1.27243322704912	chr10	96616946	96618151	+	0	NA	Intergenic	Intergenic	119146	NR_045358	75301	Mm.108650	NR_045358		4930556N09Rik	-	RIKEN cDNA 4930556N09 gene	ncRNA
common_peak1-14724-33-38-0.0459353436632801-0.312166972154323	chr3	83840861	83841919	+	0	NA	intron (NM_172681, intron 2 of 34)	intron (NM_172681, intron 2 of 34)	2693	NM_172681	229473	Mm.28838	NM_172681	ENSMUSG00000033767	D930015E06Rik	Kiaa0922|mKIAA0922	RIKEN cDNA D930015E06 gene	protein-coding
unique_peak1-3154-16-6-1.31090872021046-1.49151883326344	chr18	37826379	37827190	+	0	NA	intron (NM_033584, intron 1 of 3)	L1MC4|LINE|L1	-1975	NM_033585	93710	Mm.247203	NM_033585		Pcdhga2	mKIAA0588	protocadherin gamma subfamily A, 2	protein-coding
common_peak2-26165-28-14-1.14606852421294-2.01759298435799	chr2	18821445	18822261	+	0	NA	intron (NM_008845, intron 3 of 9)	ORR1B1|LTR|MaLR	97895	NM_008845	18718	Mm.313977	NM_008845	ENSMUSG00000026737	Pip4k2a	AW742916|Pip5k2a	phosphatidylinositol-5-phosphate 4-kinase, type II, alpha	protein-coding
common_peak2-29024-14-10-0.439784541720347-0.519648556297791	chr5	113158564	113159080	+	0	NA	intron (NM_028901, intron 39 of 43)	intron (NM_028901, intron 39 of 43)	-63490	NR_040675	67360	Mm.59218	NR_040675	ENSMUSG00000098230	1700095B10Rik	-	RIKEN cDNA 1700095B10 gene	ncRNA
common_peak1-12972-40-15-1.6589756827511-4.80655783055339	chr19	3986133	3987550	+	0	NA	5' UTR (NM_027857, exon 1 of 6)	5' UTR (NM_027857, exon 1 of 6)	180	NM_027857	71670	Mm.29735	NM_027857	ENSMUSG00000024866	Acy3	0610006H10Rik|AA3|AAIII|AW107362|Acy-3|HCBP1	aspartoacylase (aminoacylase) 3	protein-coding
common_peak2-21736-17-15-0.218296338205038-0.403453972741633	chr11	115403678	115404257	+	0	NA	Intergenic	RSINE1|SINE|B4	-6423	NM_133354	170930	Mm.29923	NM_133354	ENSMUSG00000020738	Sumo2	SUMO-2|Smt3A|Smt3b|Smt3h2	SMT3 suppressor of mif two 3 homolog 2 (yeast)	protein-coding
common_peak2-22454-17-24--0.425559851569687-0.427564438475253	chr13	43365170	43365805	+	0	NA	intron (NM_001033399, intron 1 of 1)	MER21B|LTR|ERV1	34054	NM_001033399	328232	Mm.441399	NM_001033399	ENSMUSG00000051335	Gfod1	9630032O13|AI850995	glucose-fructose oxidoreductase domain containing 1	protein-coding
common_peak1-9665-38-62--0.405827264201386-0.688998294217078	chr12	3426843	3427863	+	0	NA	promoter-TSS (NR_030694)	promoter-TSS (NR_030694)	496	NM_172421	75302	Mm.120475	NM_172421	ENSMUSG00000037486	Asxl2	4930556B16Rik|mKIAA1685	additional sex combs like 2 (Drosophila)	protein-coding
common_peak1-18208-13-42--1.64779272406433-3.48244293670685	chr8	23256387	23257123	+	0	NA	intron (NM_011848, intron 10 of 15)	intron (NM_011848, intron 10 of 15)	16211	NM_001162947	23954	Mm.41413	NM_011848	ENSMUSG00000031478	Nek3	-	NIMA (never in mitosis gene a)-related expressed kinase 3	protein-coding
common_peak1-13966-34-23-0.79710602628011-1.52482195715361	chr2	92740216	92741826	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-14237	NM_030725	80976	Mm.33490	NM_030725	ENSMUSG00000027220	Syt13	5730409J20Rik|AI549909|mKIAA1427	synaptotagmin XIII	protein-coding
common_peak2-29773-17-29--0.688594257403481-0.756750750680359	chr6	87913827	87914786	+	0	NA	Intergenic	Intergenic	17170	NM_198622	243529	Mm.33796	NM_198622	ENSMUSG00000044927	H1fx	Gm461|H1X	H1 histone family, member X	protein-coding
common_peak2-22733-22-11-1.06232160436625-1.51503956548638	chr13	108713680	108714179	+	0	NA	Intergenic	Intergenic	-33671	NM_145456	67263	Mm.490418	NM_145456	ENSMUSG00000032846	Zswim6	2900036G02Rik|mKIAA1577	zinc finger SWIM-type containing 6	protein-coding
unique_peak2-35481-5-8--0.874305337448166-1.10484139239135	chr17	44739490	44739850	+	0	NA	intron (NR_073425, intron 5 of 5)	(CCA)n|Simple_repeat|Simple_repeat	133455	NR_073425	12393	Mm.391013	NM_009820	ENSMUSG00000039153	Runx2	AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a	runt related transcription factor 2	protein-coding
common_peak1-8562-11-17--0.661231417190699-0.58239619684445	chr10	94514724	94515302	+	0	NA	Intergenic	Intergenic	-107801	NM_018797	54712	Mm.256712	NM_018797	ENSMUSG00000074785	Plxnc1	2510048K12Rik|AW742158|CD232|Vespr	plexin C1	protein-coding
common_peak2-20776-25-15-0.861849905345106-1.28534286439186	chr10	117717131	117717946	+	0	NA	Intergenic	Intergenic	14556	NM_054079	116849	Mm.213193	NM_054079	ENSMUSG00000090461	Iltifb	IL-22b|IL-TIFb|Il22b	interleukin 10-related T cell-derived inducible factor beta	protein-coding
unique_peak1-3478-15-2-2.4272022498345-3.53487848679804	chr19	10285793	10286497	+	0	NA	intron (NM_001033481, intron 24 of 25)	intron (NM_001033481, intron 24 of 25)	5622	NM_001163431	69038	Mm.375100	NM_026919	ENSMUSG00000036372	Tmem258	1810006K21Rik	transmembrane protein 258	protein-coding
common_peak2-28598-28-44--0.438893976508212-0.643431604871956	chr5	21701385	21702055	+	0	NA	intron (NM_011261, intron 3 of 63)	intron (NM_011261, intron 3 of 63)	148803	NM_011261	19699	Mm.425236	NM_011261	ENSMUSG00000042453	Reln	reeler|rl	reelin	protein-coding
unique_peak2-33134-8-20--1.38709500483119-1.45476480588849	chr10	82047864	82048605	+	0	NA	Intergenic	Intergenic	37739	NM_001135569	544717	Mm.334867	NM_001135567	ENSMUSG00000063320	1190007I07Rik	-	RIKEN cDNA 1190007I07 gene	protein-coding
unique_peak2-37646-6-6--0.241956811677302-0.947717972411649	chr5	90224274	90224668	+	0	NA	intron (NM_177872, intron 3 of 21)	intron (NM_177872, intron 3 of 21)	87888	NM_177872	330119	Mm.133062	NM_177872	ENSMUSG00000043635	Adamts3	1100001H14Rik|6330442E02Rik	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 3	protein-coding
unique_peak2-35550-2-8--2.08737925770563-1.65811743852845	chr17	62883676	62884102	+	0	NA	Intergenic	L1_Mur3|LINE|L1	346777	NM_207654	13640	Mm.7978	NM_010109		Efna5	AL-1|AV158822|EFL-5|Ephrin-A5|Epl7|LERK-7|RAGS	ephrin A5	protein-coding
common_peak1-19432-10-9-0.0344872501214071-1.05503135781948	chrX	77810757	77811292	+	0	NA	Intergenic	Intergenic	-504959	NM_138751	192216	Mm.490421	NM_138751	ENSMUSG00000025666	Tmem47	3010015F07Rik|AI115536|BCMP1|Tm4sf10	transmembrane protein 47	protein-coding
unique_peak2-37086-2-5--1.50241675698448-1.08602067057793	chr3	152193281	152193615	+	0	NA	intron (NM_001081277, intron 7 of 13)	intron (NM_001081277, intron 7 of 13)	133800	NM_001287139	108946	Mm.379292	NM_198416	ENSMUSG00000039068	Zzz3	3110065C23Rik|6430567E01Rik|AA408566|AI481057|AW556059|R75514	zinc finger, ZZ domain containing 3	protein-coding
common_peak1-14181-30-32-0.12528129013342-0.352152970649944	chr2	144185922	144187219	+	0	NA	Intergenic	B3|SINE|B2	-8149	NM_001164813	100048644	Mm.227925	NM_001164813		Pet117	Gm20571	PET117 homolog (S. cerevisiae)	protein-coding
unique_peak1-7419-9-3-1.18961340640422-1.57096726280955	chrX	143344758	143345369	+	0	NA	Intergenic	L1Md_T|LINE|L1	-51993	NM_008312	15560	Mm.439670	NM_008312	ENSMUSG00000041380	Htr2c	5-HT2C|5-HT2cR|5-HTR2C|5HT1c|Htr1c|SR1	5-hydroxytryptamine (serotonin) receptor 2C	protein-coding
common_peak2-24097-39-54--0.165598466605506-0.353756356258781	chr16	32246234	32247853	+	0	NA	promoter-TSS (NM_001185162)	promoter-TSS (NM_001185162)	68	NM_173439	268882	Mm.256137	NM_173439	ENSMUSG00000035764	Fbxo45	2610017J04Rik|AI463119|BC026799	F-box protein 45	protein-coding
unique_peak1-5311-22-7-1.6472841050874-2.63337704757512	chr5	76883441	76884133	+	0	NA	Intergenic	L1M2c|LINE|L1	-29315	NR_033501	639545	Mm.478255	NR_033501		Gm7271	EG639545	predicted gene 7271	pseudo
unique_peak2-38672-5-9--1.02630843089322-1.21398586181642	chr7	99519159	99519700	+	0	NA	intron (NM_001243046, intron 5 of 14)	intron (NM_001243046, intron 5 of 14)	135949	NM_001243047	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
unique_peak2-36964-1-5--2.2120195109379-1.32905871926422	chr3	113245005	113245395	+	0	NA	Intergenic	Intergenic	32480	NM_007446	11722	Mm.439727	NM_007446	ENSMUSG00000074264	Amy1	Amy-1|Amy1a|C030014B17Rik	amylase 1, salivary	protein-coding
common_peak2-24229-38-55--0.235902262759073-0.404412720632912	chr16	87354019	87354744	+	0	NA	promoter-TSS (NM_001159331)	promoter-TSS (NM_001159331)	-49	NM_001159331	67768	Mm.296532	NM_026366	ENSMUSG00000044442	N6amt1	5830445C04Rik|Hemk2|Pred28	N-6 adenine-specific DNA methyltransferase 1 (putative)	protein-coding
unique_peak2-38050-9-9--0.132314688483142-1.03275496310833	chr6	41604942	41605488	+	0	NA	intron (NM_001007572, intron 13 of 14)	intron (NM_001007572, intron 13 of 14)	-18811	NM_022413	64177	Mm.296889	NM_022413	ENSMUSG00000029868	Trpv6	CAT|CaT1|Cac|Ecac2|Otrpc3	transient receptor potential cation channel, subfamily V, member 6	protein-coding
common_peak2-23471-86-86-0.532692298183625-1.94974205129246	chr15	73183990	73185573	+	0	NA	intron (NM_007982, intron 2 of 31)	L1MC|LINE|L1	68840	NM_007982	14083	Mm.254494	NM_007982	ENSMUSG00000022607	Ptk2	FAK|FRNK|Fadk|mKIAA4203|p125FAK	PTK2 protein tyrosine kinase 2	protein-coding
common_peak2-29493-9-7-0.18961340640422-1.05908390183068	chr6	31218424	31218765	+	0	NA	intron (NR_040257, intron 2 of 7)	MTD|LTR|MaLR	48243	NR_040261	73652	Mm.441297	NR_040257	ENSMUSG00000087380	2210408F21Rik	-	RIKEN cDNA 2210408F21 gene	ncRNA
unique_peak1-3010-13-4-1.45654393575041-2.23384849113406	chr17	84530244	84531049	+	0	NA	Intergenic	Intergenic	52646	NR_045458	74473	Mm.399575	NR_045458		4933433H22Rik	-	RIKEN cDNA 4933433H22 gene	ncRNA
unique_peak2-34835-6-11--1.01956439034085-1.32595962126035	chr15	75678292	75678993	+	0	NA	Intergenic	Intergenic	-6304	NM_172121	223642	Mm.209800	NM_172121	ENSMUSG00000075600	Zc3h3	BC049953|Kiaa0150|Smicl|Zc3hdc3	zinc finger CCCH type containing 3	protein-coding
unique_peak1-6311-19-2-2.81772482594053-4.27364484827118	chr7	43780065	43781052	+	0	NA	Intergenic	Intergenic	2739346	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak1-9471-15-9-0.690236655668294-0.732381977911291	chr11	104663500	104664078	+	0	NA	Intergenic	RLTR22_Mur|LTR|ERVK	194475	NM_016780	16416	Mm.87150	NM_016780	ENSMUSG00000020689	Itgb3	CD61|GP3A|INGRB3	integrin beta 3	protein-coding
common_peak2-22381-29-54--0.669069632909549-1.18863360106103	chr13	30544638	30545632	+	0	NA	Intergenic	Intergenic	92050	NM_025710	66694	Mm.181933	NM_025710	ENSMUSG00000038462	Uqcrfs1	4430402G14Rik|AI875505	ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1	protein-coding
common_peak1-10493-26-35--0.24202590928385-0.384630725886657	chr14	101842122	101842954	+	0	NA	3' UTR (NM_001081278, exon 19 of 19)	3' UTR (NM_001081278, exon 19 of 19)	165870	NM_001081278	210789	Mm.320639	NM_173380	ENSMUSG00000033083	Tbc1d4	5930406J04Rik|A930035N22|AV295684|As160	TBC1 domain family, member 4	protein-coding
common_peak1-10388-42-65--0.30206479149127-0.522142286192486	chr13	95524036	95525295	+	0	NA	Intergenic	L1_Rod|LINE|L1	-34233	NM_009321	21371	Mm.379025	NM_009321	ENSMUSG00000042043	Tbca	Tbca13	tubulin cofactor A	protein-coding
common_peak2-24056-25-20-0.469532482566345-0.662033714151238	chr16	25584276	25584943	+	0	NA	Intergenic	Intergenic	-99242	NM_001127259	22061	Mm.20894	NM_011641	ENSMUSG00000022510	Trp63	AI462811|Ket|P51/P63|P63|P73l|Tp63|Trp53rp1	transformation related protein 63	protein-coding
common_peak2-28072-13-21--0.680959587999529-0.607095980551316	chr4	75277615	75278284	+	0	NA	Intergenic	Intergenic	-353759	NM_025849	66928	Mm.24332	NM_025849	ENSMUSG00000028398	Tmem261	1700027K24Rik|3110001D03Rik	transmembrane protein 261	protein-coding
common_peak1-16950-108-91-0.846615005351056-5.0128952623237	chr6	84266395	84269264	+	0	NA	Intergenic	Intergenic	106003	NR_046063	100038556	Mm.387783	NR_046063		Gm10445	ENSMUSG00000072956	predicted gene 10445	ncRNA
unique_peak2-34606-10-15--0.643584654991231-0.519648556297791	chr14	73238808	73239653	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-129420	NM_207636	319448	Mm.205421	NM_207636	ENSMUSG00000033487	Fndc3a	1700094E19Rik|D14Ertd453e|F730017H24Rik|Fndc3|sys	fibronectin type III domain containing 3A	protein-coding
unique_peak2-38786-5-9--1.02630843089322-1.21398586181642	chr7	128320814	128321265	+	0	NA	Intergenic	MTE2a|LTR|MaLR	94087	NM_139310	246190	Mm.221073	NM_139310	ENSMUSG00000034990	Otoa	-	otoancorin	protein-coding
unique_peak2-35996-8-14--0.901668177660948-0.660903317613906	chr19	36117748	36118520	+	0	NA	intron (NM_008315, intron 1 of 2)	intron (NM_008315, intron 1 of 2)	13716	NM_008315	15566	Mm.254266	NM_008315	ENSMUSG00000024798	Htr7	5-HT7	5-hydroxytryptamine (serotonin) receptor 7	protein-coding
common_peak1-17807-9-16--0.897849434846119-0.732381977911291	chr7	100607712	100608232	+	0	NA	Intergenic	MLT1F2|LTR|MaLR	379583	NM_021427	58238	Mm.113787	NM_021427		Fam181b	A830059I20Rik|AB041569	family with sequence similarity 181, member B	protein-coding
common_peak1-19082-26-14-1.02100849654994-1.59386218057211	chr9	70833006	70834127	+	0	NA	Intergenic	Intergenic	-50951	NM_008280	15450	Mm.390187	NM_008280	ENSMUSG00000032207	Lipc	AI256194|HL|Hpl	lipase, hepatic	protein-coding
unique_peak2-36616-2-21--3.37688587490062-4.27364484827118	chr3	8666895	8667924	+	0	NA	promoter-TSS (NM_010423)	promoter-TSS (NM_010423)	-371	NM_010423	15213	Mm.29581	NM_010423	ENSMUSG00000040289	Hey1	AI316788|AI414254|CHF2|HRT1|Herp2|Hesr1|bHLHb31|hesr-1	hairy/enhancer-of-split related with YRPW motif 1	protein-coding
unique_peak2-38586-2-6--1.72480917832092-1.26211192963361	chr7	68019369	68019812	+	0	NA	Intergenic	Lx6|LINE|L1	-734485	NM_001082962	20646	Mm.274995	NM_013670	ENSMUSG00000000948	Snrpn	2410045I01Rik|HCERN3|Peg4|Pwcr1|SMN	small nuclear ribonucleoprotein N	protein-coding
common_peak2-31739-21-31--0.430510734733764-0.49501414494053	chr9	15237614	15238313	+	0	NA	Intergenic	ETnERV2-int|LTR|ERVK	-71976	NM_133214	170748	Mm.86572	NM_133214	ENSMUSG00000058173	Smco4	Fn5	single-pass membrane protein with coiled-coil domains 4	protein-coding
unique_peak1-5024-14-3-1.89921616035764-2.80787975886178	chr4	129806493	129807015	+	0	NA	TTS (NM_198959)	TTS (NM_198959)	9041	NM_001163027	230777	Mm.246595	NM_198959	ENSMUSG00000028778	Hcrtr1	Ox1r	hypocretin (orexin) receptor 1	protein-coding
common_peak2-21042-36-30-0.525124775780879-0.956885677565404	chr11	35971802	35972894	+	0	NA	intron (NM_001290702, intron 8 of 27)	intron (NM_001290702, intron 8 of 27)	-178757	NM_170779	211652	Mm.31267	NM_170779		Wwc1	AA408228|AU017197|BC037006|Kibra|mKIAA0869	WW, C2 and coiled-coil domain containing 1	protein-coding
unique_peak2-34765-3-5--0.998945590680433-0.96108193396963	chr15	58422438	58422810	+	0	NA	Intergenic	Intergenic	175601	NM_145959	210998	Mm.3224	NM_145959	ENSMUSG00000037119	D15Ertd621e	AV220772|BC033609|Fam91a1|SKIN|mKIAA0493	DNA segment, Chr 15, ERATO Doi 621, expressed	protein-coding
common_peak2-32109-31-47--0.359723829908033-0.560152715697887	chr9	100545110	100546291	+	0	NA	intron (NM_009282, intron 1 of 33)	intron (NM_009282, intron 1 of 33)	1658	NM_009282	20842	Mm.42135	NM_009282	ENSMUSG00000037286	Stag1	AU045003|SA-1|Scc3	stromal antigen 1	protein-coding
unique_peak1-5748-8-2-1.42025991722641-1.65811743852845	chr6	50260403	50260858	+	0	NA	intron (NM_027881, intron 16 of 21)	L1MEc|LINE|L1	-48862	NM_018769	54722	Mm.248361	NM_018769	ENSMUSG00000029821	Dfna5	2310037D07Rik|4932441K13Rik|Dfna5h|EG14210|Fin15	deafness, autosomal dominant 5 (human)	protein-coding
common_peak1-12161-26-43--0.531532526478835-0.806432121853421	chr17	29007839	29008965	+	0	NA	intron (NM_001034885, intron 1 of 9)	B1_Mus2|SINE|Alu	13046	NM_001034885	433091	Mm.328925	NM_001034885	ENSMUSG00000043286	Pnpla1	-	patatin-like phospholipase domain containing 1	protein-coding
common_peak1-11504-40-51--0.0414640353899935-0.301029995663982	chr16	33684251	33685728	+	0	NA	intron (NM_175256, intron 1 of 14)	CpG	437	NM_175256	77446	Mm.245741	NM_172934	ENSMUSG00000075254	Heg1	4632417D23Rik|5530401I02Rik|9530025L16Rik|BC038614|Gm629|OTTMUSG00000027315	HEG homolog 1 (zebrafish)	protein-coding
unique_peak2-37337-1-7--2.62705701021674-1.80617997398389	chr4	130576454	130576885	+	0	NA	Intergenic	Intergenic	76369	NM_010769	17180	Mm.271796	NM_010769	ENSMUSG00000040533	Matn1	CMP|Crtm|Mat1|matrilin-1	matrilin 1, cartilage matrix protein	protein-coding
common_peak2-24549-7-7--0.200909169701811-0.97990265578305	chr17	28025736	28026313	+	0	NA	intron (NM_001080769, intron 14 of 20)	B4A|SINE|B4	18645	NM_026836	68776	Mm.267998	NM_026836	ENSMUSG00000024218	Taf11	1110038O14Rik|28kDa|AI115401|AL024207|AW552398|PRO214|TAF2I|TAFII28	TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor	protein-coding
common_peak2-23416-19-15-0.402687326661686-0.519193887192487	chr15	59794948	59795807	+	0	NA	Intergenic	Intergenic	52796	NM_027668	71088	Mm.425950	NM_027668	ENSMUSG00000071749	4933412E24Rik	-	RIKEN cDNA 4933412E24 gene	protein-coding
common_peak1-14060-27-25-0.291106232754144-0.488172498216822	chr2	119662528	119663616	+	0	NA	Intergenic	Intergenic	37822	NM_019392	22174	Mm.2901	NM_019392	ENSMUSG00000027298	Tyro3	AI323366|Brt|Dtk|Etk-2|Rse|Sky|TK19-2|Tif|etk2/tyro3	TYRO3 protein tyrosine kinase 3	protein-coding
common_peak2-19976-12-14--0.25811461052088-0.309074325783021	chr1	133227796	133228228	+	0	NA	intron (NM_001081011, intron 13 of 22)	intron (NM_001081011, intron 13 of 22)	-51872	NM_019777	56489	Mm.386783	NM_019777	ENSMUSG00000042349	Ikbke	AW558201|IKK-i|IKKepsilon|Ikki	inhibitor of kappaB kinase epsilon	protein-coding
common_peak2-27198-20-15-0.488074784591193-0.590343908676236	chr3	38257421	38258192	+	0	NA	Intergenic	Intergenic	125932	NM_001167883	99696	Mm.290937	NM_001033198	ENSMUSG00000044864	Ankrd50	AI662170|E430012K20Rik|mKIAA1223|mKIAA3019	ankyrin repeat domain 50	protein-coding
unique_peak2-36181-5-11--1.28934283672701-1.477227296591	chr2	30171509	30171953	+	0	NA	intron (NM_198304, intron 13 of 43)	B1_Mus1|SINE|Alu	29778	NM_198304	227699	Mm.330119	NM_198304	ENSMUSG00000052533	Nup188	BC025526|U89435|mKIAA0169	nucleoporin 188	protein-coding
common_peak2-32324-9-9--0.132314688483142-1.03275496310833	chrX	73477410	73477912	+	0	NA	Intergenic	Intergenic	-31984	NM_001013760	238829	Mm.292319	NM_001013760	ENSMUSG00000071738	Gm4937	EG238829	predicted gene 4937	protein-coding
unique_peak2-32474-3-6--1.22133801201688-1.08602067057793	chr1	34005951	34006316	+	0	NA	intron (NM_001276764, intron 2 of 102)	intron (NM_001276764, intron 2 of 102)	41063	NM_001276764	13518	Mm.336625	NM_010081	ENSMUSG00000026131	Dst	2310001O04Rik|A830042E19Rik|AW554249|BP230|BPAG1-n|Bpag|Bpag1|Macf2|ah|athetoid|dt|mKIAA0728|nmf203|nmf339	dystonin	protein-coding
unique_peak1-2951-11-5-0.923731083530457-1.477227296591	chr17	70719345	70719944	+	0	NA	Intergenic	Intergenic	-54488	NM_177639	224997	Mm.311840	NM_027712	ENSMUSG00000003279	Dlgap1	4933422O14Rik|9630002F18|AI845682|AI848168|BB075781|D17Bwg0511e|GKAP/SAPAP|GKPA/SAPAP|Gkap|Sapap1|mKIAA4162	discs, large (Drosophila) homolog-associated protein 1	protein-coding
unique_peak1-2431-8-2-1.42025991722641-1.65811743852845	chr15	101278408	101278897	+	0	NA	intron (NM_025487, intron 1 of 4)	B4|SINE|B4	476	NM_025487	66322	Mm.158111	NM_025487	ENSMUSG00000063971	1700011A15Rik	-	RIKEN cDNA 1700011A15 gene	protein-coding
unique_peak1-5369-9-0-3.18961340640422-3.01029995663981	chr5	96898694	96899237	+	0	NA	intron (NM_175473, intron 2 of 73)	MLT1J1|LTR|MaLR	95991	NM_175473	231470	Mm.291120	NM_175473	ENSMUSG00000034687	Fras1	E130113P14Rik|bl|mKIAA1500	Fraser syndrome 1 homolog (human)	protein-coding
unique_peak1-3896-9-2-1.60465090568306-1.87199725847353	chr2	20738140	20738632	+	0	NA	Intergenic	MLT1A0|LTR|MaLR	150962	NM_001081364	71435	Mm.28507	NM_001081364	ENSMUSG00000036591	Arhgap21	5530401C11Rik|AA416458|ARHGAP10	Rho GTPase activating protein 21	protein-coding
unique_peak1-6950-10-0-3.35641534500877-3.31132995230379	chr8	111367893	111368344	+	0	NA	intron (NM_007496, intron 3 of 9)	intron (NM_007496, intron 3 of 9)	-92642	NR_037295	100526511		NR_037295		Mir3108	mmu-mir-3108	microRNA 3108	ncRNA
common_peak2-20399-17-14-0.311405742596519-0.466170754204149	chr10	22148733	22149473	+	0	NA	Intergenic	Intergenic	26484	NR_028580	100038752	Mm.392859	NR_028580	ENSMUSG00000096937	Gm10825	ENSMUSG00000075295	predicted gene 10825	ncRNA
common_peak1-14620-9-7-0.18961340640422-1.05908390183068	chr3	52554262	52554803	+	0	NA	intron (NR_038079, intron 1 of 3)	B4A|SINE|B4	10886	NR_038079	329639	Mm.131245	NR_038079		Gm2447	100039832|A530017F20	predicted gene 2447	ncRNA
common_peak1-18881-20-22--0.03548717146582-0.301029995663994	chr9	30426816	30427721	+	0	NA	Intergenic	Intergenic	192354	NM_028874	102607	Mm.35084	NM_028874	ENSMUSG00000031993	Snx19	3526401K03Rik|AI195321|AI848208|mKIAA0254	sorting nexin 19	protein-coding
unique_peak2-36686-5-9--1.02630843089322-1.21398586181642	chr3	32736276	32736730	+	0	NA	intron (NM_001013024, intron 1 of 20)	intron (NM_001013024, intron 1 of 20)	19955	NM_001013024	72607	Mm.316153	NM_001013024		Usp13	2700071E21Rik|AI848077|ISOT3|IsoT-3	ubiquitin specific peptidase 13 (isopeptidase T-3)	protein-coding
unique_peak1-851-13-2-2.19350952991661-3.03832868024006	chr11	19940258	19940856	+	0	NA	Intergenic	B2_Mm2|SINE|B2	72397	NM_146243	66713	Mm.259045	NM_146243	ENSMUSG00000020152	Actr2	4921510D23Rik|AA409782|Arp2|D6Ertd746e	ARP2 actin-related protein 2	protein-coding
common_peak1-9402-11-6-0.701338662194009-1.32595962126035	chr11	100618315	100618839	+	0	NA	intron (NM_001081194, intron 2 of 16)	(GA)n|Simple_repeat|Simple_repeat	2515	NM_001081194	380728	Mm.297539	NM_001081194	ENSMUSG00000035355	Kcnh4	BEC2	potassium voltage-gated channel, subfamily H (eag-related), member 4	protein-coding
common_peak1-16200-18-21--0.146512467408946-0.306326795069975	chr5	92812184	92812935	+	0	NA	intron (NM_181728, intron 2 of 9)	intron (NM_181728, intron 2 of 9)	-20237	NR_038116	56066	Mm.131723	NM_019494	ENSMUSG00000060183	Cxcl11	Cxc11|H174|I-tac|Ip9|Itac|Scyb11|Scyb9b|b-R1|betaR1	chemokine (C-X-C motif) ligand 11	protein-coding
common_peak2-22291-32-36-0.0696386535907099-0.327094617740873	chr13	14063748	14065047	+	0	NA	intron (NM_178640, intron 3 of 11)	intron (NM_178640, intron 3 of 11)	17456	NM_178640	97884	Mm.21686	NM_178640	ENSMUSG00000039242	B3galnt2	A930105D20Rik|C80633|D230016N13Rik	UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	protein-coding
unique_peak2-39380-6-8--0.60452689106201-1.03789460276074	chr9	21265329	21265821	+	0	NA	intron (NM_001253893, intron 2 of 20)	intron (NM_001253893, intron 2 of 20)	35433	NR_029585	387194		NR_029585	miRBase:MI0000241	Mir199a-1	Mirn199|Mirn199a-1	microRNA 199a-1	ncRNA
common_peak2-32050-7-4-0.477162735410827-1.09384600808989	chr9	83575858	83576293	+	0	NA	Intergenic	Intergenic	-9007	NR_046066	100039222	Mm.405596	NR_046066		Gm2109	-	predicted gene 2109	ncRNA
common_peak2-23544-17-15-0.218296338205038-0.403453972741633	chr15	78832637	78833166	+	0	NA	TTS (NR_105921)	TTS (NR_105921)	248	NR_105921	102465577		NR_105921		Mir6956	mmu-mir-6956	microRNA mir-6956	ncRNA
common_peak1-16712-19-20-0.0103699038829257-0.306326795069978	chr6	29211616	29212456	+	0	NA	Intergenic	Intergenic	-10452	NM_001190461	69573	Mm.45161	NM_023516	ENSMUSG00000043421	Hilpda	2310016C08Rik|AW049004|Hig2	hypoxia inducible lipid droplet associated	protein-coding
common_peak2-27090-21-27--0.237865656791368-0.339372226903478	chr3	98024935	98025578	+	0	NA	promoter-TSS (NM_026328)	promoter-TSS (NM_026328)	-823	NM_026328	67709	Mm.46306	NM_026328	ENSMUSG00000027876	Reg4	2010002L15Rik|GISP|RELP	regenerating islet-derived family, member 4	protein-coding
common_peak2-29181-20-35--0.681850216851119-0.950553505527076	chr5	135008235	135008952	+	0	NA	intron (NM_009990, intron 2 of 16)	intron (NM_009990, intron 2 of 16)	19711	NM_001039162	269713	Mm.255138	NM_009990	ENSMUSG00000063146	Clip2	B230327O20|CLIP-115|Clip1|Cyln2|WSCR4|mKIAA0291|wbscr4	CAP-GLY domain containing linker protein 2	protein-coding
unique_peak2-38198-6-7--0.434601889619698-0.97990265578305	chr6	108709592	108710088	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-23213	NM_026011	67166	Mm.271178	NM_026011	ENSMUSG00000030105	Arl8b	2610313E07Rik|3100002J04Rik|Arl10c|gie1	ADP-ribosylation factor-like 8B	protein-coding
unique_peak1-6126-8-4-0.683294323060208-1.21878474469819	chr6	129407411	129407861	+	0	NA	Intergenic	L1Md_F3|LINE|L1	-5618	NM_175526	243653	Mm.131289	NM_175526	ENSMUSG00000033082	Clec1a	5930406N14Rik	C-type lectin domain family 1, member a	protein-coding
common_peak2-24976-28-37--0.194968393622123-0.350690697593776	chr18	6515817	6516965	+	0	NA	promoter-TSS (NM_007935)	promoter-TSS (NM_007935)	-285	NM_007935	13831	Mm.312133	NM_007935	ENSMUSG00000024240	Epc1	2400007E14Rik|5730566F07Rik|A930032N02Rik	enhancer of polycomb homolog 1 (Drosophila)	protein-coding
common_peak1-11499-10-10--0.103016273628528-0.301029995663987	chr15	103214887	103215424	+	0	NA	Intergenic	Intergenic	-17976	NM_010577	16402	Mm.16234	NM_010577	ENSMUSG00000000555	Itga5	Cd49e|Fnra|VLA5	integrin alpha 5 (fibronectin receptor alpha)	protein-coding
common_peak1-16346-13-15--0.221527969362231-0.308519316180257	chr5	120116469	120116980	+	0	NA	Intergenic	Intergenic	-4147	NM_198052	21386	Mm.219139	NM_011535	ENSMUSG00000018604	Tbx3	D5Ertd189e	T-box 3	protein-coding
common_peak1-17236-38-66--0.494636531159242-0.920775588791488	chr6	128225190	128226568	+	0	NA	intron (NM_001080979, intron 1 of 10)	intron (NM_001080979, intron 1 of 10)	24952	NM_001080979	21679	Mm.14774	NM_011567	ENSMUSG00000030353	Tead4	ETFR-2|Etfr2|FR-19|Rtef1|TEAD-4|TEF-3|Tcf13r1|Tef3|Tefr|Tefr1|Tefr1a	TEA domain family member 4	protein-coding
unique_peak1-4254-10-5-0.771452844287613-1.33892459842472	chr2	128738931	128739502	+	0	NA	Intergenic	B3A|SINE|B2	30540	NM_020594	57432	Mm.11675	NM_020594	ENSMUSG00000027387	Zc3h8	AU020882|E130108N08Rik|Fliz1|Zc3hdc8	zinc finger CCCH type containing 8	protein-coding
common_peak2-26479-61-74-0.15393063925346-0.413122813965767	chr2	79398131	79399865	+	0	NA	Intergenic	L1MC3|LINE|L1	-76584	NM_080558	70599	Mm.272881	NM_080558	ENSMUSG00000027007	Ssfa2	5730488C15Rik|CS-1|CS1|KRAP|SPAG13|mKIAA1927	sperm specific antigen 2	protein-coding
unique_peak1-1517-6-3-0.565398110380302-1.08602067057793	chr13	6237161	6237642	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-310002	NM_145131	69617	Mm.41933	NM_145131	ENSMUSG00000021193	Pitrm1	2310012C15Rik|AA410010|MP-1|MP1|Ntup1|PreP|mKIAA1104	pitrilysin metallepetidase 1	protein-coding
unique_peak1-3184-9-1-2.18961340640422-2.31132995230379	chr18	46805284	46805834	+	0	NA	Intergenic	Intergenic	48201	NM_010120	13664	Mm.262037	NM_010120	ENSMUSG00000057561	Eif1a	C76390|Ef1a|Eftu|Eif4c|eIF-1A|eIF-4C	eukaryotic translation initiation factor 1A	protein-coding
unique_peak2-35450-1-5--2.2120195109379-1.32905871926422	chr17	35826363	35826754	+	0	NA	intron (NM_172962, intron 8 of 16)	intron (NM_172962, intron 8 of 16)	10977	NM_001198833	12305	Mm.5021	NM_007584	ENSMUSG00000003534	Ddr1	6030432F18|AI323681|CD167a|Cak|Nep|PTK3A	discoidin domain receptor family, member 1	protein-coding
common_peak1-19249-23-32--0.322626614849373-0.436052471002795	chr9	110117045	110117958	+	0	NA	intron (NM_009211, intron 25 of 27)	L2|LINE|L2	-28786	NM_013884	29873	Mm.38496	NM_013884	ENSMUSG00000032482	Cspg5	Caleb|Ngc	chondroitin sulfate proteoglycan 5	protein-coding
common_peak1-11278-117-151-0.261096341704378-0.928600448717364	chr15	82145302	82148147	+	0	NA	Intergenic	IAPLTR2a|LTR|ERVK	17310	NM_029066	74716	Mm.159315	NM_029066	ENSMUSG00000022455	Wbp2nl	4930521I23Rik|PAWP	WBP2 N-terminal like	protein-coding
unique_peak2-32456-0-6--3.64748585253182-1.56314192529759	chr1	11626175	11626588	+	0	NA	intron (NM_001160369, intron 7 of 13)	intron (NM_001160369, intron 7 of 13)	222195	NM_001160371	320492	Mm.52021	NM_177173	ENSMUSG00000057715	A830018L16Rik	-	RIKEN cDNA A830018L16 gene	protein-coding
unique_peak1-3567-30-9-1.84774731460451-4.06788929322894	chr19	27338038	27339377	+	0	NA	Intergenic	Intergenic	47197	NM_001161420	22359	Mm.4141	NM_013703	ENSMUSG00000024924	Vldlr	AA408956|AI451093|AW047288	very low density lipoprotein receptor	protein-coding
unique_peak1-3102-7-0-2.79909083029819-2.40823996531185	chr18	25708061	25708564	+	0	NA	intron (NM_001146294, intron 2 of 12)	intron (NM_001146294, intron 2 of 12)	204172	NM_133195	108013	Mm.266435	NM_133195	ENSMUSG00000024268	Celf4	A230070D14Rik|BRUNOL-4|Brul4|Brunol4|C130060B05Rik	CUGBP, Elav-like family member 4	protein-coding
unique_peak1-5460-7-0-2.79909083029819-2.40823996531185	chr5	122930734	122931230	+	0	NA	intron (NM_001110140, intron 5 of 19)	intron (NM_001110140, intron 5 of 19)	21252	NM_001110140	11938	Mm.227583	NM_009722	ENSMUSG00000029467	Atp2a2	9530097L16Rik|D5Wsu150e|SERCA2|SERCA2B|mKIAA4195	ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	protein-coding
common_peak2-31548-21-22-0.0459273092092225-0.319918318021793	chr8	111724883	111725766	+	0	NA	Intergenic	Intergenic	139484	NR_002928	384864	Mm.390083	NR_002928		Gm1943	-	WD repeat domain 70 pseudogene	pseudo
unique_peak1-48-10-5-0.771452844287613-1.33892459842472	chr1	23382504	23383016	+	0	NA	intron (NM_001081079, intron 5 of 6)	intron (NM_001081079, intron 5 of 6)	7254	NM_001081079	70155	Mm.28013	NM_001081079	ENSMUSG00000026158	Ogfrl1	2210417C17Rik	opioid growth factor receptor-like 1	protein-coding
unique_peak1-129-9-0-3.18961340640422-3.01029995663981	chr1	64648950	64649463	+	0	NA	3' UTR (NM_009952, exon 9 of 9)	3' UTR (NM_009952, exon 9 of 9)	14536	NM_025964	67099	Mm.46394	NM_025964	ENSMUSG00000025956	Mettl21a	2310038H17Rik|AI464204|Fam119a	methyltransferase like 21A	protein-coding
common_peak1-16222-70-102--0.0665336108078201-0.318402933244072	chr5	99977882	99979634	+	0	NA	intron (NR_030692, intron 2 of 3)	Lx9|LINE|L1	179321	NR_030692	319818	Mm.295233	NR_030692	ENSMUSG00000089809	A930011G23Rik	-	RIKEN cDNA A930011G23 gene	ncRNA
common_peak1-16551-9-9--0.132314688483142-1.03275496310833	chr5	144318049	144318570	+	0	NA	intron (NM_026050, intron 2 of 2)	PB1D7|SINE|Alu	8735	NM_026050	67238	Mm.383219	NM_026050	ENSMUSG00000048910	Fam220a	1500026F15Rik|2810453I06Rik|AW047776|Acpin1|Sipar	family with sequence similarity 220, member A	protein-coding
common_peak2-24684-8-6-0.197867495889966-1.03789460276074	chr17	43138606	43138965	+	0	NA	Intergenic	Intergenic	-14719	NM_178589	94185	Mm.200792	NM_178589	ENSMUSG00000023915	Tnfrsf21	AA959878|DR6|R74815|TR7	tumor necrosis factor receptor superfamily, member 21	protein-coding
common_peak2-22319-12-41--1.74354143769112-3.61278843657669	chr13	21833708	21834716	+	0	NA	Intergenic	RLTR21|LTR|ERVK	7247	NM_178210	319159	Mm.486099	NM_178210		Hist1h4j	-	histone cluster 1, H4j	protein-coding
unique_peak2-38733-6-9--0.75652998450706-1.11707584880836	chr7	112428671	112429022	+	0	NA	Intergenic	Intergenic	-7763	NM_001011533	259161	Mm.377867	NM_001011533	ENSMUSG00000073909	Olfr688	MOR40-16|MOR40-5|Olfr688-ps1	olfactory receptor 688	protein-coding
common_peak1-10520-26-12-1.22745937401737-2.03163221100073	chr14	8016037	8017259	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	-9601	NM_001270812	100861615	Mm.488431	NM_001270812	ENSMUSG00000079396	LOC100861615	-	alpha takusan-like	protein-coding
common_peak1-16503-11-8-0.338768582809301-1.14218153353838	chr5	139457374	139458060	+	0	NA	intron (NM_008808, intron 4 of 5)	intron (NM_008808, intron 4 of 5)	13190	NM_008808	18590	Mm.2675	NM_008808	ENSMUSG00000025856	Pdgfa	-	platelet derived growth factor, alpha	protein-coding
common_peak1-10515-16-12-0.417823924126969-0.489164546851866	chr14	7900043	7900717	+	0	NA	Intergenic	RLTR45-int|LTR|ERVK	37591	NM_001024712	100042149	Mm.396155	NM_001024712	ENSMUSG00000092167	Gm3696	544988|ENSMUSG00000056940|Gm10014	predicted gene 3696	protein-coding
unique_peak1-3751-25-4-2.53992181045774-4.94184174098665	chr19	53183117	53184030	+	0	NA	Intergenic	Intergenic	-31360	NM_001164099	27360	Mm.426080	NM_013758	ENSMUSG00000025026	Add3	AI463285|R75380	adducin 3 (gamma)	protein-coding
unique_peak1-3116-17-3-2.21829633820504-3.11807310444576	chr18	32396585	32397188	+	0	NA	TTS (NM_011946)	TTS (NM_011946)	-3099	NM_133658	13872	Mm.282335	NM_133658	ENSMUSG00000024382	Ercc3	BTF2 p89|Ercc-3|XPB	excision repair cross-complementing rodent repair deficiency, complementation group 3	protein-coding
common_peak1-8654-29-58--0.770352968746731-1.54911055580826	chr10	127642669	127643791	+	0	NA	intron (NM_001285779, intron 12 of 17)	B3|SINE|B2	5620	NM_025716	66701	Mm.29694	NM_025716	ENSMUSG00000051346	Spryd4	4633402N23Rik|AA114801	SPRY domain containing 4	protein-coding
common_peak2-25510-45-37-0.612430511901287-1.31742449843083	chr19	5567002	5568403	+	0	NA	promoter-TSS (NM_001033448)	promoter-TSS (NM_001033448)	-372	NM_001033448	381201	Mm.441906	NM_001033448	ENSMUSG00000049562	Ap5b1	Gm962	adaptor-related protein complex 5, beta 1 subunit	protein-coding
unique_peak1-4032-10-2-1.77145284428761-2.09384600808989	chr2	51072675	51073317	+	0	NA	Intergenic	Intergenic	-24355	NR_040636	329404	Mm.417725	NR_040636	ENSMUSG00000086349	Gm13497	A730015I17|OTTMUSG00000012425	predicted gene 13497	ncRNA
common_peak1-17049-57-93--0.288555811598709-0.628512678031267	chr6	97178395	97180232	+	0	NA	intron (NM_022992, intron 1 of 2)	PB1D10|SINE|Alu	18527	NM_022992	65106	Mm.291014	NM_022992	ENSMUSG00000035199	Arl6ip5	5930404D22Rik|AV001879|Aip-5|Gtrap3-18|addiscin	ADP-ribosylation factor-like 6 interacting protein 5	protein-coding
common_peak2-26142-13-24--0.865384159136956-0.879255460030357	chr2	13544434	13545198	+	0	NA	Intergenic	L1_Mus3|LINE|L1	48878	NM_011701	22352	Mm.268000	NM_011701	ENSMUSG00000026728	Vim	-	vimentin	protein-coding
unique_peak2-36998-10-12--0.344024373132323-0.340565874754526	chr3	121644552	121645111	+	0	NA	Intergenic	(TTAG)n|Simple_repeat|Simple_repeat	-11413	NM_172525	214137	Mm.229287	NM_172525	ENSMUSG00000039831	Arhgap29	6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1	Rho GTPase activating protein 29	protein-coding
common_peak1-8019-16-8-0.948338640825749-1.02063122982878	chr1	168584645	168585299	+	0	NA	Intergenic	L1M2|LINE|L1	-7148	NM_001164312	226604	Mm.330032	NM_001164312	ENSMUSG00000051081	Gm4847	EG226604|Fmo12	predicted gene 4847	protein-coding
common_peak2-21067-57-74-0.0372143495830484-0.313973398029927	chr11	48977962	48980382	+	0	NA	Intergenic	Intergenic	5654	NM_146276	258273	Mm.377407	NM_146276	ENSMUSG00000048378	Olfr1394	MOR280-1	olfactory receptor 1394	protein-coding
unique_peak2-35534-3-5--0.998945590680433-0.96108193396963	chr17	56266749	56267139	+	0	NA	exon (NM_001130456, exon 11 of 17)	exon (NM_001130456, exon 11 of 17)	-5575	NM_029796	76905	Mm.348025	NM_029796	ENSMUSG00000037095	Lrg1	1300008B03Rik|2310031E04Rik|Lrg|Lrhg	leucine-rich alpha-2-glycoprotein 1	protein-coding
common_peak2-28834-18-5-1.7279566505072-2.39372960542229	chr5	66523686	66524121	+	0	NA	intron (NM_001127382, intron 2 of 7)	B4A|SINE|B4	18314	NM_001291226	245945	Mm.36863	NM_139065	ENSMUSG00000070780	Rbm47	9530077J19Rik	RNA binding motif protein 47	protein-coding
common_peak2-19607-21-26--0.185398236897233-0.318406410381916	chr1	34120816	34121726	+	0	NA	intron (NM_134448, intron 1 of 97)	intron (NM_134448, intron 1 of 97)	52601	NM_134448	13518	Mm.336625	NM_010081	ENSMUSG00000026131	Dst	2310001O04Rik|A830042E19Rik|AW554249|BP230|BPAG1-n|Bpag|Bpag1|Macf2|ah|athetoid|dt|mKIAA0728|nmf203|nmf339	dystonin	protein-coding
unique_peak2-39448-1-10--3.08648862885404-2.57096726280955	chr9	48707659	48708275	+	0	NA	exon (NM_001099644, exon 9 of 9)	exon (NM_001099644, exon 9 of 9)	11237	NM_013561	15561	Mm.4831	NM_013561	ENSMUSG00000032269	Htr3a	5-HT3	5-hydroxytryptamine (serotonin) receptor 3A	protein-coding
common_peak1-17195-8-9--0.316705676939792-1.03275496310833	chr6	124808666	124809180	+	0	NA	exon (NM_013533, exon 5 of 5)	exon (NM_013533, exon 5 of 5)	-1218	NM_013534	14789	Mm.35708	NM_013534	ENSMUSG00000023191	Leprel2	BC016431|Grcb|P3h3	leprecan-like 2	protein-coding
unique_peak1-5430-12-3-1.64877598508764-2.36932189928148	chr5	114707786	114708207	+	0	NA	intron (NM_148935, intron 8 of 9)	intron (NM_148935, intron 8 of 9)	15774	NM_148935	116810	Mm.17709	NM_148935	ENSMUSG00000042002	Foxn4	-	forkhead box N4	protein-coding
unique_peak2-35711-10-10--0.103016273628528-0.301029995663987	chr18	33214028	33214501	+	0	NA	intron (NM_009793, intron 1 of 10)	intron (NM_009793, intron 1 of 10)	115569	NM_009793	12326	Mm.222329	NM_009793	ENSMUSG00000038128	Camk4	A430110E23Rik|AI666733|CaMKIV|CaMKIV/Gr|D18Bwg0362e	calcium/calmodulin-dependent protein kinase IV	protein-coding
unique_peak2-33682-11-14--0.398197011356905-0.379391706698377	chr11	103016465	103017099	+	0	NA	Intergenic	Intergenic	-15670	NM_001077698	57778	Mm.138913	NM_019679	ENSMUSG00000055805	Fmnl1	8030453N10Rik|AI553564|Fmnl|Fnrl|Frls	formin-like 1	protein-coding
common_peak2-23540-15-12-0.311725032414564-0.425539671739611	chr15	77910566	77911220	+	0	NA	intron (NM_007583, intron 1 of 3)	intron (NM_007583, intron 1 of 3)	38817	NM_007583	12300	Mm.277338	NM_007583		Cacng2	AW060990|B230105C07Rik|B930041E13Rik|stargazer|stargazin|stg|wag|waggler	calcium channel, voltage-dependent, gamma subunit 2	protein-coding
unique_peak1-5760-8-2-1.42025991722641-1.65811743852845	chr6	51437237	51437721	+	0	NA	Intergenic	Intergenic	16864	NM_007624	12417	Mm.280968	NM_007624	ENSMUSG00000029836	Cbx3	HP1g|M32	chromobox 3	protein-coding
common_peak1-8462-25-35--0.308075096097206-0.423354874519378	chr10	80053649	80054486	+	0	NA	promoter-TSS (NM_145421)	promoter-TSS (NM_145421)	-981	NM_145421	216169	Mm.29802	NM_145421	ENSMUSG00000003346	Abhd17a	1700013O15Rik|BC005632|D10Bwg1364e|Fam108a	abhydrolase domain containing 17A	protein-coding
common_peak2-22065-22-21-0.187852486450107-0.376654945067947	chr12	72085954	72086679	+	0	NA	intron (NM_011184, intron 5 of 10)	intron (NM_011184, intron 5 of 10)	10706	NM_011184	19167	Mm.296338	NM_011184		Psma3	Lmpc8	proteasome (prosome, macropain) subunit, alpha type 3	protein-coding
common_peak2-22259-21-10-1.11005764662894-1.59083646988122	chr13	5803130	5803711	+	0	NA	Intergenic	Intergenic	53918	NR_045891	71867	Mm.179181	NR_045891		1700016G22Rik	-	RIKEN cDNA 1700016G22 gene	ncRNA
common_peak1-13551-30-34-0.0403923925469067-0.31344009820369	chr2	4558679	4559816	+	0	NA	intron (NM_026045, intron 5 of 9)	intron (NM_026045, intron 5 of 9)	13885	NM_026045	67229	Mm.38529	NM_026045	ENSMUSG00000039449	Prpf18	2810441A10Rik	PRP18 pre-mRNA processing factor 18 homolog (yeast)	protein-coding
unique_peak1-1276-10-5-0.771452844287613-1.33892459842472	chr11	117993923	117994546	+	0	NA	Intergenic	ORR1A4|LTR|MaLR	-3701	NM_001167746	69926	Mm.473893	NM_001167746	ENSMUSG00000033987	Dnah17	2810003K23Rik|Dnahc17|Dnahcl1|Gm1178|mKIAA3028	dynein, axonemal, heavy chain 17	protein-coding
common_peak2-24278-54-86--0.269857734218994-0.570756121772392	chr16	96126845	96128187	+	0	NA	intron (NR_040484, intron 1 of 3)	RLTR12B|LTR|ERVK	-7196	NR_040485	69776	Mm.120470	NR_040484	ENSMUSG00000086899	1600002D24Rik	-	RIKEN cDNA 1600002D24 gene	ncRNA
common_peak2-27843-6-10--0.894033508256995-1.21398586181642	chr3	152149644	152150150	+	0	NA	intron (NM_001081277, intron 10 of 13)	intron (NM_001081277, intron 10 of 13)	90249	NM_001287139	108946	Mm.379292	NM_198416	ENSMUSG00000039068	Zzz3	3110065C23Rik|6430567E01Rik|AA408566|AI481057|AW556059|R75514	zinc finger, ZZ domain containing 3	protein-coding
unique_peak1-1472-22-4-2.32535601020004-3.9780981129625	chr12	111455671	111456276	+	0	NA	Intergenic	Intergenic	-59690	NR_045466	67280	Mm.390495	NR_045466		3110009F21Rik	-	RIKEN cDNA 3110009F21 gene	ncRNA
common_peak2-24610-77-95-0.199564078834841-0.539575460195755	chr17	33759626	33760561	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-5944	NR_034153	328801	Mm.181488	NM_026712	ENSMUSG00000073423	Zfp414	0610030H11Rik|Znf414	zinc finger protein 414	protein-coding
common_peak1-14249-10-4-1.03448725012141-1.5150158574804	chr2	154658139	154658645	+	0	NA	intron (NM_023130, intron 2 of 8)	intron (NM_023130, intron 2 of 8)	41546	NM_001139511	19383	Mm.221440	NM_023130	ENSMUSG00000027593	Raly	AI663842|Merc	hnRNP-associated with lethal yellow	protein-coding
unique_peak1-972-21-9-1.24756117037887-1.83731222263754	chr11	61699271	61700160	+	0	NA	intron (NM_019921, intron 12 of 14)	B4A|SINE|B4	-31121	NM_013881	29869	Mm.162025	NM_013881	ENSMUSG00000004798	Ulk2	A830085I22Rik|AU015340|Unc51.2|mKIAA0623	unc-51 like kinase 2	protein-coding
common_peak2-31075-26-59--0.978991503450056-2.39089534683746	chr8	23207594	23208570	+	0	NA	intron (NM_177898, intron 10 of 19)	CT-rich|Low_complexity|Low_complexity	27443	NM_177898	330721	Mm.113940	NM_177898	ENSMUSG00000037738	Nek5	6530411J22|BB049667	NIMA (never in mitosis gene a)-related expressed kinase 5	protein-coding
unique_peak2-32771-6-7--0.434601889619698-0.97990265578305	chr1	173804787	173805224	+	0	NA	intron (NM_001289470, intron 5 of 8)	intron (NM_001289470, intron 5 of 8)	35177	NM_013489	12523	Mm.259115	NM_013489	ENSMUSG00000038147	Cd84	A130013D22Rik|CDw84|SLAMF5	CD84 antigen	protein-coding
unique_peak2-38296-14-19--0.422711934529718-0.403453972741636	chr6	135261727	135262434	+	0	NA	Intergenic	L1MB8|LINE|L1	-1678	NM_029595	76400	Mm.293018	NM_029595		Pbp2	1700023A18Rik|AI326308|Pebp-2|Pebp2	phosphatidylethanolamine binding protein 2	protein-coding
unique_peak2-35459-5-11--1.28934283672701-1.477227296591	chr17	36920493	36921034	+	0	NA	Intergenic	Intergenic	10908	NM_177637	224761	Mm.246584	NM_177637	ENSMUSG00000037246	H2-M10.5	6.9H	histocompatibility 2, M region locus 10.5	protein-coding
unique_peak1-752-8-3-1.00522241794757-1.39487600375387	chr10	115814330	115814834	+	0	NA	intron (NM_029928, intron 30 of 31)	intron (NM_029928, intron 30 of 31)	-40595	NR_028107	67342	Mm.245800	NM_026098	ENSMUSG00000020164	Kcnmb4os1	1700058G18Rik	potassium large conductance calcium-activated channel, subfamily M, beta member 4, opposite strand 1	ncRNA
common_peak2-26842-20-63--1.51192521540881-4.77972453505171	chr2	153345733	153346734	+	0	NA	intron (NM_001134300, intron 1 of 10)	intron (NM_001134300, intron 1 of 10)	9474	NM_001134300	329540	Mm.50600	NM_001001986	ENSMUSG00000061411	Nol4l	4931410H15|8430427H17Rik|AI429157|Gm1636	nucleolar protein 4-like	protein-coding
common_peak2-27396-81-107-0.117162100845097-0.398002954161618	chr3	88139739	88143324	+	0	NA	intron (NM_178246, intron 1 of 21)	intron (NM_178246, intron 1 of 21)	1349	NM_178246	229512	Mm.439830	NM_173188	ENSMUSG00000001415	Smg5	BC024683|mKIAA1089	Smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans)	protein-coding
common_peak2-21431-14-31--1.10078383964236-1.53513093355237	chr11	86483944	86484530	+	0	NA	intron (NM_029478, intron 1 of 11)	intron (NM_029478, intron 1 of 11)	13087	NM_029478	75909	Mm.390398	NM_029478	ENSMUSG00000018171	Vmp1	3110098I04Rik|4930579A11Rik|AI787464|Tango5|Tmem49|ni-2	vacuole membrane protein 1	protein-coding
common_peak2-28796-46-46-0.343407091571164-0.703723098351394	chr5	64701146	64702442	+	0	NA	intron (NM_019636, intron 12 of 19)	intron (NM_019636, intron 12 of 19)	80198	NM_001289514	57915	Mm.286353	NM_019636	ENSMUSG00000029174	Tbc1d1	1110062G02Rik|AI385682|AW555803|Tbc1|mKIAA1108	TBC1 domain family, member 1	protein-coding
common_peak2-19600-29-31-0.112290080615111-0.353704024845522	chr1	33657643	33658347	+	0	NA	intron (NM_008922, intron 7 of 13)	RLTR10C|LTR|ERVK	68644	NM_008922	19076	Mm.27705	NM_008922	ENSMUSG00000026134	Prim2	AI323589	DNA primase, p58 subunit	protein-coding
common_peak1-15142-7-10--0.660340788339108-1.12966497611638	chr3	144761325	144761828	+	0	NA	intron (NM_178697, intron 1 of 13)	intron (NM_178697, intron 1 of 13)	429	NM_178697	229933	Mm.331420	NM_178697	ENSMUSG00000036960	Clca5	4732440A06|AI586120|Clca2	chloride channel calcium activated 5	protein-coding
unique_peak2-35053-2-6--1.72480917832092-1.26211192963361	chr16	10349621	10350000	+	0	NA	Intergenic	Intergenic	-35749	NM_007929	13731	Mm.246009	NM_007929	ENSMUSG00000022505	Emp2	XMP	epithelial membrane protein 2	protein-coding
unique_peak2-35011-6-9--0.75652998450706-1.11707584880836	chr15	101177496	101178042	+	0	NA	Intergenic	Intergenic	-22014	NR_035462	100316694		NR_035462	miRBase:MI0009930	Mir1941	mmu-mir-1941	microRNA 1941	ncRNA
common_peak2-25612-8-7-0.00522241794757061-1.00793137938329	chr19	8965861	8966178	+	0	NA	TTS (NM_025463)	TTS (NM_025463)	-1458	NM_176843	109077	Mm.290474	NM_176843	ENSMUSG00000071652	Ints5	1110055N21Rik|mKIAA1698	integrator complex subunit 5	protein-coding
common_peak2-27299-95-244--0.788722593978557-6.2239712477073	chr3	60499329	60502644	+	0	NA	Intergenic	L1Md_T|LINE|L1	195812	NM_001253708	56758	Mm.255723	NM_020007	ENSMUSG00000027763	Mbnl1	Mbnl|mKIAA0428	muscleblind-like 1 (Drosophila)	protein-coding
common_peak2-31573-30-22-0.64611345343486-1.04213512323541	chr8	119423695	119424594	+	0	NA	intron (NM_026844, intron 2 of 3)	IAPEz-int|LTR|ERVK	21192	NM_026844	66531	Mm.4011	NM_026844	ENSMUSG00000014633	Cmc2	1110046L09Rik|2310061C15Rik|DC13	COX assembly mitochondrial protein 2	protein-coding
common_peak2-30886-9-22--1.33394854965279-1.52222891542741	chr7	141455025	141455881	+	0	NA	Intergenic	Intergenic	-38673	NM_007400	11489	Mm.439714	NM_007400	ENSMUSG00000054555	Adam12	Mltna|mKIAA4001	a disintegrin and metallopeptidase domain 12 (meltrin alpha)	protein-coding
unique_peak1-171-8-1-2.00522241794757-2.05605744720049	chr1	74085593	74086109	+	0	NA	intron (NM_001289895, intron 3 of 32)	intron (NM_001289895, intron 3 of 32)	85170	NM_027884	21961	Mm.309975	NM_027884	ENSMUSG00000055322	Tns1	1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns	tensin 1	protein-coding
unique_peak1-4887-9-2-1.60465090568306-1.87199725847353	chr4	43508255	43508779	+	0	NA	TTS (NM_001013377)	TTS (NM_001013377)	2280	NM_001037913	622404	Mm.289109	NM_001037913	ENSMUSG00000028461	Ccdc107	-	coiled-coil domain containing 107	protein-coding
common_peak1-9015-16-25--0.58217607587303-0.633951497070961	chr11	60931009	60931878	+	0	NA	Intergenic	MTC|LTR|MaLR	-22894	NM_021349	57916	Mm.265915	NM_021349	ENSMUSG00000010142	Tnfrsf13b	1200009E08Rik|Taci	tumor necrosis factor receptor superfamily, member 13b	protein-coding
unique_peak2-37176-4-8--1.19338551529556-1.21878474469819	chr4	46601478	46601917	+	0	NA	intron (NM_001164804, intron 1 of 11)	B1_Mus1|SINE|Alu	13104	NM_001164804	107684	Mm.416311	NM_178893	ENSMUSG00000028337	Coro2a	9030208C03Rik|AI563590|IR10	coronin, actin binding protein 2A	protein-coding
common_peak1-17450-17-17-0.0483713367627256-0.325169893479371	chr7	18840022	18840799	+	0	NA	intron (NM_153749, intron 1 of 4)	intron (NM_153749, intron 1 of 4)	9714	NM_153749	266815	Mm.106769	NM_153749	ENSMUSG00000054005	Mill1	5530400I18Rik	MHC I like leukocyte 1	protein-coding
common_peak1-7559-34-50--0.290356814970229-0.452279894471924	chr1	40266395	40267269	+	0	NA	Intergenic	Intergenic	-15093	NM_008362	16177	Mm.896	NM_008362	ENSMUSG00000026072	Il1r1	CD121a|CD121b|IL-iR|Il1r-1	interleukin 1 receptor, type I	protein-coding
unique_peak2-38455-5-6--0.511735258063458-0.947717972411649	chr7	28570297	28570790	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	19851	NR_033484	100043229	Mm.458666	NR_033484		Gm10046	ENSMUSG00000058661	predicted gene 10046	ncRNA
common_peak2-30518-11-12--0.191746133889479-0.310474156842889	chr7	66060412	66060935	+	0	NA	intron (NM_009728, intron 12 of 20)	MIRb|SINE|MIR	147101	NM_009728	11982	Mm.135129	NM_009728	ENSMUSG00000025324	Atp10a	Atp10c|pfatp	ATPase, class V, type 10A	protein-coding
unique_peak2-36505-13-22--0.745089925419244-0.690311289528838	chr2	157078325	157079231	+	0	NA	exon (NM_001039557, exon 8 of 25)	exon (NM_001039557, exon 8 of 25)	-26056	NM_019642	20014	Mm.22130	NM_019642	ENSMUSG00000027642	Rpn2	1300012C06Rik|AV261018|Rpn-2	ribophorin II	protein-coding
common_peak1-17955-69-88-0.119409016292335-0.396142811983599	chr7	128523204	128524903	+	0	NA	Intergenic	Intergenic	-11757	NM_001081327	195646	Mm.247449	NM_177575	ENSMUSG00000046321	Hs3st2	6430516N12Rik|A830061E14Rik|AW491345	heparan sulfate (glucosamine) 3-O-sulfotransferase 2	protein-coding
common_peak2-20557-20-31--0.511925215408807-0.634510163964152	chr10	70094618	70095941	+	0	NA	intron (NR_045291, intron 1 of 5)	intron (NR_045291, intron 1 of 5)	19394	NR_045291	319646	Mm.483039	NR_045291	ENSMUSG00000037747	D630013N20Rik	-	RIKEN cDNA D630013N20 gene	ncRNA
unique_peak1-5839-7-2-1.21412832957703-1.45399745587252	chr6	72660504	72660935	+	0	NA	intron (NM_009332, intron 3 of 11)	intron (NM_009332, intron 3 of 11)	78320	NM_001079822	21415	Mm.440067	NM_009332	ENSMUSG00000055799	Tcf7l1	Tcf-3|Tcf3|bHLHb21	transcription factor 7 like 1 (T cell specific, HMG box)	protein-coding
common_peak2-19642-47-54-0.153481711241888-0.393610822453554	chr1	43098212	43099265	+	0	NA	Intergenic	Intergenic	56729	NM_001013025	73122	Mm.246069	NM_001013025	ENSMUSG00000070939	Tgfbrap1	3110018K12Rik|AU024090|AU042859|AW742551|Trap1	transforming growth factor, beta receptor associated protein 1	protein-coding
unique_peak2-38623-9-10--0.269818212233077-1.05503135781948	chr7	80786508	80787059	+	0	NA	Intergenic	MLT1C|LTR|MaLR	44666	NR_033604	244061	Mm.484605	NR_033604		Gm4971	EG244061	Smad nuclear interacting protein 1 pseudogene	pseudo
common_peak2-28658-26-51--0.77254062598263-1.49688973786043	chr5	31240626	31241553	+	0	NA	intron (NR_105788, intron 2 of 7)	intron (NR_105788, intron 2 of 7)	2691	NR_105788	102465191		NR_105788		Mir6369	mmu-mir-6369	microRNA mir-6369	ncRNA
unique_peak1-3439-13-0-3.77847203063777-4.51544993495972	chr19	6853309	6853838	+	0	NA	Intergenic	Intergenic	50861	NR_039555	100628576		NR_039555		Mir5046	mmu-mir-5046|mu-mir-5046	microRNA 5046	ncRNA
common_peak2-26114-31-28-0.367257675685551-0.572500200098098	chr2	5844507	5845844	+	0	NA	exon (NM_001081131, exon 5 of 17)	exon (NM_001081131, exon 5 of 17)	18663	NM_001081131	209692	Mm.222517	NM_001081131	ENSMUSG00000025815	Dhtkd1	C330018I04Rik	dehydrogenase E1 and transketolase domain containing 1	protein-coding
unique_peak2-35634-5-8--0.874305337448166-1.10484139239135	chr17	87694169	87694647	+	0	NA	intron (NM_028639, intron 3 of 19)	B4|SINE|B4	12182	NM_028639	225049	Mm.77396	NM_028639	ENSMUSG00000036918	Ttc7	1110035E02Rik|1700007L07Rik|Ttc7a|fsn|hea	tetratricopeptide repeat domain 7	protein-coding
common_peak1-15328-16-15-0.118263642268062-0.328191099940264	chr4	46560018	46560867	+	0	NA	intron (NM_178893, intron 5 of 12)	MTB_Mm|LTR|MaLR	-11429	NM_029077	74735	Mm.240252	NM_029077	ENSMUSG00000039853	Trim14	5830400N10Rik|pub	tripartite motif-containing 14	protein-coding
unique_peak2-36401-3-7--1.41398308995928-1.23214870625617	chr2	125072760	125073174	+	0	NA	promoter-TSS (NM_001159646)	promoter-TSS (NM_001159646)	-17	NM_001159646	110074	Mm.282499	NM_023595	ENSMUSG00000027203	Dut	5031412I06Rik|5133400F09Rik|D2Bwg0749e|Dutp|dUTPase	deoxyuridine triphosphatase	protein-coding
common_peak1-12987-31-31-0.225238670813123-0.416139936131877	chr19	4192016	4193007	+	0	NA	intron (NM_031868, intron 1 of 6)	CpG	337	NM_031868	19045	Mm.1970	NM_031868	ENSMUSG00000040385	Ppp1ca	Ppp1c|dism2	protein phosphatase 1, catalytic subunit, alpha isoform	protein-coding
unique_peak2-33627-7-15--1.20090916970181-0.947446088118041	chr11	97661840	97662413	+	0	NA	intron (NM_010688, intron 1 of 6)	intron (NM_010688, intron 1 of 6)	1140	NM_010688	16796	Mm.271967	NM_010688	ENSMUSG00000038366	Lasp1	AA408629|Def-4|SH3P6|Tg(Col1a1-lacZ)1Ngma	LIM and SH3 protein 1	protein-coding
common_peak1-8270-27-27-0.184191028837632-0.393151991482004	chr10	24635569	24636644	+	0	NA	intron (NM_007482, intron 6 of 7)	intron (NM_007482, intron 6 of 7)	5636	NR_105870	102465545		NR_105870		Mir6905	mmu-mir-6905	microRNA mir-6905	ncRNA
common_peak1-9006-117-71-1.33909885370565-11.2444624135072	chr11	60244085	60246586	+	0	NA	intron (NM_025757, intron 2 of 5)	intron (NM_025757, intron 2 of 5)	14688	NM_025757	66771	Mm.29950	NM_025757	ENSMUSG00000018415	Gid4	4933439F18Rik	GID complex subunit 4, VID24 homolog (S. cerevisiae)	protein-coding
unique_peak2-36448-2-6--1.72480917832092-1.26211192963361	chr2	136832667	136833084	+	0	NA	intron (NM_001038641, intron 4 of 7)	L1MB3|LINE|L1	107788	NM_001038641	74243	Mm.330612	NM_028201	ENSMUSG00000027281	Slx4ip	2210009G21Rik|2410004I22Rik|C85661|Slxip	SLX4 interacting protein	protein-coding
common_peak1-14391-126-194-0.0303298862022148-0.31484380606135	chr2	170510832	170512158	+	0	NA	Intergenic	Intergenic	-45812	NM_029761	76829	Mm.41633	NM_029761	ENSMUSG00000027560	Dok5	2700055C10Rik	docking protein 5	protein-coding
common_peak1-16127-29-43--0.347141538022187-0.479515789778906	chr5	67306722	67307752	+	0	NA	intron (NM_001001980, intron 3 of 25)	intron (NM_001001980, intron 3 of 25)	-52418	NM_001256122	77569	Mm.374778	NM_001001980	ENSMUSG00000037736	Limch1	3732412D22Rik|mKIAA1102	LIM and calponin homology domains 1	protein-coding
common_peak2-25055-24-48--0.821499941347492-1.45748092439676	chr18	33213060	33213896	+	0	NA	intron (NM_009793, intron 1 of 10)	intron (NM_009793, intron 1 of 10)	114783	NM_009793	12326	Mm.222329	NM_009793	ENSMUSG00000038128	Camk4	A430110E23Rik|AI666733|CaMKIV|CaMKIV/Gr|D18Bwg0362e	calcium/calmodulin-dependent protein kinase IV	protein-coding
common_peak1-15038-15-15-0.0121647505556561-0.30803596071496	chr3	121720960	121721768	+	0	NA	Intergenic	Intergenic	-26014	NM_007378	11304	Mm.3918	NM_007378	ENSMUSG00000028125	Abca4	AW050280|Abc10|Abcr|D430003I15Rik|RmP	ATP-binding cassette, sub-family A (ABC1), member 4	protein-coding
unique_peak2-39021-9-9--0.132314688483142-1.03275496310833	chr8	60859837	60860445	+	0	NA	intron (NM_175032, intron 4 of 11)	intron (NM_175032, intron 4 of 11)	319452	NM_001177534	100271928	Mm.484123	NM_001177534		Gm15881	OTTMUSG00000027193	predicted gene 15881	protein-coding
common_peak2-20970-4-10--1.48289213249054-1.5150158574804	chr11	20532830	20533170	+	0	NA	intron (NM_001038625, intron 1 of 1)	intron (NM_001038625, intron 1 of 1)	1020	NM_001038625	58172	Mm.339676	NM_021372	ENSMUSG00000049800	Sertad2	AB041541|AU021878|Kiaa0127|SEI-2|Sei2|TRIP-Br2|mKIAA0127	SERTA domain containing 2	protein-coding
common_peak1-7912-24-49--0.850646287007008-1.56058662248874	chr1	136414978	136415853	+	0	NA	Intergenic	Intergenic	24178	NM_145510	98710	Mm.198119	NM_145510	ENSMUSG00000042229	Rabif	AI842864|AW549708|E130318E12Rik|MSS4|RASGFR3	RAB interacting factor	protein-coding
unique_peak1-5247-8-0-3.00522241794757-2.70926996097583	chr5	53359532	53359945	+	0	NA	Intergenic	PB1D7|SINE|Alu	23793	NR_040413	75954	Mm.258937	NR_040413		5033403H07Rik	-	RIKEN cDNA 5033403H07 gene	ncRNA
common_peak1-14033-20-35--0.681850216851119-0.950553505527076	chr2	117249403	117250226	+	0	NA	Intergenic	Intergenic	-81201	NM_011246	19419	Mm.42150	NM_011246	ENSMUSG00000027347	Rasgrp1	Rasgrp	RAS guanyl releasing protein 1	protein-coding
unique_peak2-36496-4-10--1.48289213249054-1.5150158574804	chr2	154568514	154569177	+	0	NA	Intergenic	RLTR28|LTR|ERVL	-48001	NM_001139512	19383	Mm.221440	NM_023130	ENSMUSG00000027593	Raly	AI663842|Merc	hnRNP-associated with lethal yellow	protein-coding
unique_peak1-6360-9-7-0.18961340640422-1.05908390183068	chr7	66342907	66343400	+	0	NA	Intergenic	IAP-d-int|LTR|ERVK	-140967	NM_173010	22215	Mm.9002	NM_011668	ENSMUSG00000025326	Ube3a	4732496B02|5830462N02Rik|A130086L21Rik|Hpve6a|mKIAA4216	ubiquitin protein ligase E3A	protein-coding
common_peak1-10699-36-39-0.157392991280392-0.394172396164276	chr14	56886486	56887624	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-5958	NM_013542	14939	Mm.14874	NM_013542	ENSMUSG00000015437	Gzmb	AI553453|CCP-1/C11|CCP1|Ctla-1|Ctla1|GZB	granzyme B	protein-coding
unique_peak2-35425-7-20--1.59322659248057-1.71830443967823	chr17	34605794	34606579	+	0	NA	exon (NM_030746, exon 9 of 9)	exon (NM_030746, exon 9 of 9)	6696	NM_030746	632126	Mm.484958	NM_030746	ENSMUSG00000058435	Btnl4	Btn3a3|EG632126|NG11	butyrophilin-like 4	protein-coding
unique_peak1-1775-9-1-2.18961340640422-2.31132995230379	chr14	41008899	41009413	+	0	NA	Intergenic	Intergenic	540205	NR_045936	73591	Mm.65499	NR_045936		1700109I08Rik	-	RIKEN cDNA 1700109I08 gene	ncRNA
common_peak2-25897-13-8-0.608547029195456-0.660903317613904	chr19	45363907	45364318	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-54386	NM_010691	16814	Mm.116815	NM_010691		Lbx1	Lbx1h	ladybird homeobox homolog 1 (Drosophila)	protein-coding
common_peak1-10485-27-23-0.40658345017408-0.622271369641148	chr13	118386587	118387511	+	0	NA	Intergenic	L1MC|LINE|L1	-4078	NM_010408	15165	Mm.343429	NM_010408		Hcn1	Bcng1|C630013B14Rik|HAC2	hyperpolarization-activated, cyclic nucleotide-gated K+ 1	protein-coding
unique_peak2-34932-1-10--3.08648862885404-2.57096726280955	chr15	86033706	86034058	+	0	NA	Intergenic	Intergenic	-11007	NM_145476	223754	Mm.28904	NM_145476	ENSMUSG00000051864	Tbc1d22a	BC023106|D15Ertd781e	TBC1 domain family, member 22a	protein-coding
common_peak2-24179-5-9--1.02630843089322-1.21398586181642	chr16	49970107	49970614	+	0	NA	Intergenic	Intergenic	-10213	NR_045001	628951	Mm.428032	NR_045001		Gm6936	-	predicted gene 6936	ncRNA
unique_peak1-2121-19-3-2.40268732666169-3.59864904409227	chr15	51591911	51592653	+	0	NA	Intergenic	Intergenic	104725	NM_080635	68135	Mm.289800	NM_080635	ENSMUSG00000022312	Eif3h	1110008A16Rik|40kD|9430017H16Rik|EIF3-P40|EIF3-gamma|Eif3s3	eukaryotic translation initiation factor 3, subunit H	protein-coding
unique_peak1-3880-10-4-1.03448725012141-1.5150158574804	chr2	13554023	13554550	+	0	NA	Intergenic	Intergenic	58348	NM_011701	22352	Mm.268000	NM_011701	ENSMUSG00000026728	Vim	-	vimentin	protein-coding
unique_peak1-4449-41-11-2.1161862041275-6.59495851266917	chr2	173236724	173238693	+	0	NA	Intergenic	ORR1D2|LTR|MaLR	-110385	NM_028158	72221	Mm.46132	NM_028158	ENSMUSG00000027518	1700021F07Rik	-	RIKEN cDNA 1700021F07 gene	protein-coding
common_peak1-11526-10-14--0.550475250599749-0.446472590016315	chr16	3883980	3884518	+	0	NA	promoter-TSS (NM_029090)	promoter-TSS (NM_029090)	-370	NM_029090	74763	Mm.28403	NM_029090	ENSMUSG00000005982	Naa60	1200013P24Rik|AI315146|Nat15	N(alpha)-acetyltransferase 60, NatF catalytic subunit	protein-coding
common_peak2-20815-64-100--0.192765081043191-0.467468668135477	chr10	128034860	128036694	+	0	NA	Intergenic	MER21B|LTR|ERV1	-9220	NM_010153	13867	Mm.373043	NM_010153		Erbb3	C76256|Erbb-3|Erbb3r|Her3	v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)	protein-coding
unique_peak2-37204-3-7--1.41398308995928-1.23214870625617	chr4	63601933	63602398	+	0	NA	Intergenic	Intergenic	-79847	NM_009403	21949	Mm.4664	NM_009403		Tnfsf8	CD153|CD30LG|Cd30l	tumor necrosis factor (ligand) superfamily, member 8	protein-coding
common_peak1-14883-48-60-0.0401898136719279-0.316920393882012	chr3	95995486	95996697	+	0	NA	intron (NM_022030, intron 10 of 12)	intron (NM_022030, intron 10 of 12)	5418	NM_026975	69168	Mm.104531	NM_026975	ENSMUSG00000015943	Bola1	1810037G04Rik	bolA-like 1 (E. coli)	protein-coding
common_peak2-31833-37-50--0.146432270485676-0.337231681760967	chr9	44767066	44768077	+	0	NA	intron (NM_145400, intron 3 of 19)	intron (NM_145400, intron 3 of 19)	6112	NM_145400	140630	Mm.215069	NM_145400	ENSMUSG00000059890	Ube4a	4732444G18Rik|9930123J21Rik|UFD2b	ubiquitination factor E4A	protein-coding
common_peak2-28949-15-22--0.511397205501357-0.50761186003982	chr5	100415608	100416284	+	0	NA	Intergenic	RLTR10C|LTR|ERVK	-7989	NM_001077265	11991	Mm.150231	NM_007516		Hnrnpd	Auf1|Hnrpd	heterogeneous nuclear ribonucleoprotein D	protein-coding
common_peak1-18026-97-56-1.35111105732754-9.16254141902456	chr7	142433609	142436689	+	0	NA	Intergenic	Intergenic	-25153	NM_001163611	100043254	Mm.192092	NM_001163611	ENSMUSG00000073804	Nps	ENSMUSG00000073804	neuropeptide S	protein-coding
unique_peak1-995-8-0-3.00522241794757-2.70926996097583	chr11	70444023	70444545	+	0	NA	Intergenic	PB1D7|SINE|Alu	-8340	NM_010326	14723	Mm.377085	NM_010326	ENSMUSG00000050675	Gp1ba	GPIba|GPIbalpha	glycoprotein 1b, alpha polypeptide	protein-coding
common_peak1-12671-48-63--0.0290728487651855-0.301029995663976	chr18	36725390	36726921	+	0	NA	intron (NM_175375, intron 1 of 33)	intron (NM_175375, intron 1 of 33)	5898	NM_175375	108857	Mm.482287	NM_175375	ENSMUSG00000024483	Ankhd1	1110004O12Rik|4933432B13Rik|9130019P20Rik|A530027J04Rik|A630021B20Rik|AA571404|Mask|mFLJ00246|mKIAA1085	ankyrin repeat and KH domain containing 1	protein-coding
common_peak2-19812-37-41-0.133675648707058-0.363463023472118	chr1	88436875	88437847	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	14050	NM_008972	19231	Mm.19187	NM_008972	ENSMUSG00000026238	Ptma	Thym	prothymosin alpha	protein-coding
common_peak2-32150-22-36--0.562169260541546-0.734130039933318	chr9	108306237	108306994	+	0	NA	3' UTR (NM_001135198, exon 7 of 7)	3' UTR (NM_001135198, exon 7 of 7)	11450	NM_053216	112418	Mm.78287	NM_053216	ENSMUSG00000032611	1700102P08Rik	AI593206	RIKEN cDNA 1700102P08 gene	protein-coding
common_peak2-30308-29-64--0.910077732413344-2.17301518846909	chr7	19920612	19921435	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	-9397	NM_001127324	13870	Mm.280913	NM_007948	ENSMUSG00000003549	Ercc1	Ercc-1	excision repair cross-complementing rodent repair deficiency, complementation group 1	protein-coding
common_peak1-8426-14-9-0.577288065470282-0.630231561310125	chr10	77150370	77150999	+	0	NA	intron (NM_001287074, intron 1 of 11)	intron (NM_001287074, intron 1 of 11)	1370	NM_001287074	252974	Mm.221237	NM_145855	ENSMUSG00000069581	Tspear	C330046G03Rik|ORF65|TSP-EAR|Tnep1	thrombospondin type laminin G domain and EAR repeats	protein-coding
common_peak2-31463-10-14--0.550475250599749-0.446472590016315	chr8	105606301	105607033	+	0	NA	Intergenic	L1Md_Gf|LINE|L1	264767	NR_036588	69794	Mm.396139	NR_036588		1600027J07Rik	-	RIKEN cDNA 1600027J07 gene	ncRNA
unique_peak2-36620-3-10--1.87341470859657-1.75805390616669	chr3	58310519	58311046	+	0	NA	Intergenic	MT2A|LTR|ERVL	-18961	NM_001005509	229317	Mm.21617	NM_001005509	ENSMUSG00000027810	Eif2a	D030048D22|D3Ertd194e	eukaryotic translation initiation factor 2A	protein-coding
unique_peak1-1032-11-2-1.92373108353046-2.32232533660526	chr11	76351152	76351639	+	0	NA	intron (NM_198894, intron 1 of 22)	ID4|SINE|ID	-28474	NM_198018	109934	Mm.258939	NM_198018	ENSMUSG00000017631	Abr	-	active BCR-related gene	protein-coding
unique_peak1-5494-8-4-0.683294323060208-1.21878474469819	chr5	135648332	135648827	+	0	NA	intron (NM_009745, intron 2 of 5)	B3|SINE|B2	4337	NM_009745	12054	Mm.405834	NM_009745	ENSMUSG00000029681	Bcl7b	-	B cell CLL/lymphoma 7B	protein-coding
common_peak2-26245-12-15--0.351224014912361-0.332077462497413	chr2	29628284	29628988	+	0	NA	Intergenic	B3|SINE|B2	11588	NM_001177392	433416	Mm.330112	NM_001034887	ENSMUSG00000075425	Gm13547	OTTMUSG00000012686	predicted gene 13547	protein-coding
common_peak1-16559-41-43-0.241717086211363-0.486454540233427	chr5	145190765	145192144	+	0	NA	Intergenic	MTD|LTR|MaLR	72060	NR_102373	100579137		NR_102372		Dmr	-	Dmrt1 related	ncRNA
common_peak1-10648-50-61-0.0867440060920774-0.34378656500321	chr14	47297663	47299275	+	0	NA	Intergenic	(TATAA)n|Simple_repeat|Simple_repeat	-41371	NR_046460	74458	Mm.390708	NR_046460		4933425B07Rik	-	RIKEN cDNA 4933425B07 gene	ncRNA
common_peak1-9468-39-51--0.0846784712219382-0.309716464454027	chr11	104468644	104470130	+	0	NA	promoter-TSS (NM_016780)	promoter-TSS (NM_016780)	73	NM_016780	16416	Mm.87150	NM_016780	ENSMUSG00000020689	Itgb3	CD61|GP3A|INGRB3	integrin beta 3	protein-coding
unique_peak1-2247-11-8-0.338768582809301-1.14218153353838	chr15	77275242	77275748	+	0	NA	intron (NM_001024848, intron 1 of 4)	intron (NM_001024848, intron 1 of 4)	2395	NM_001024848	278679	Mm.440965	NM_001024848	ENSMUSG00000068252	Apol7b	-	apolipoprotein L 7b	protein-coding
common_peak1-11909-11-6-0.701338662194009-1.32595962126035	chr17	27082576	27083123	+	0	NA	intron (NM_001281491, intron 2 of 18)	intron (NM_001281491, intron 2 of 18)	2215	NR_037244	100526534		NR_037244	miRBase:MI0014046	Mir3083	mmu-mir-3083	microRNA 3083	ncRNA
common_peak2-32375-20-22--0.03548717146582-0.301029995663994	chrX	104413094	104413954	+	0	NA	Intergenic	Intergenic	-37693	NM_001177781	213439	Mm.383562	NM_001033251	ENSMUSG00000073008	Gpr174	Gm376|Lypsr3	G protein-coupled receptor 174	protein-coding
common_peak1-12084-32-22-0.755530063162647-1.34355844763204	chr17	24643946	24645289	+	0	NA	3' UTR (NM_027937, exon 20 of 20)	3' UTR (NM_027937, exon 20 of 20)	18889	NM_027937	268932	Mm.70989	NM_027937	ENSMUSG00000033597	Caskin1	3300002N10Rik|C130061I24|C630036E02Rik|mKIAA1306	CASK interacting protein 1	protein-coding
unique_peak2-32500-5-10--1.16381195464315-1.33892459842472	chr1	46854583	46855100	+	0	NA	Intergenic	Intergenic	55513	NM_172653	227059	Mm.233889	NM_172653	ENSMUSG00000025986	Slc39a10	2900042E17Rik|5430433I10|mKIAA1265	solute carrier family 39 (zinc transporter), member 10	protein-coding
unique_peak2-34418-11-9-0.186765489364251-0.344532117358383	chr14	17661045	17661624	+	0	NA	intron (NM_001289760, intron 1 of 9)	L1_Mus3|LINE|L1	-253344	NM_001289762	218772	Mm.259318	NM_011243	ENSMUSG00000017491	Rarb	A830025K23|Hap|Nr1b2	retinoic acid receptor, beta	protein-coding
common_peak1-15961-19-22--0.120874629395327-0.306080386793804	chr5	31193096	31193855	+	0	NA	non-coding (NR_122117, exon 4 of 16)	non-coding (NR_122117, exon 4 of 16)	1768	NM_001294262	231093	Mm.440364	NM_174849	ENSMUSG00000029165	Agbl5	4930455N08|9430057O19Rik|CCP5	ATP/GTP binding protein-like 5	protein-coding
common_peak1-7758-27-21-0.532114332257938-0.800403172662453	chr1	91398043	91398991	+	0	NA	intron (NM_001037136, intron 1 of 16)	intron (NM_001037136, intron 1 of 16)	47131	NM_001037136	347722	Mm.291135	NM_178119	ENSMUSG00000055013	Agap1	Centg2|Ggap1|R75364|mKIAA1099	ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	protein-coding
common_peak1-13946-28-35--0.11696588162085-0.313805205020546	chr2	91053870	91054756	+	0	NA	TTS (NM_007387)	TTS (NM_007387)	11244	NM_007387	11432	Mm.45570	NM_007387	ENSMUSG00000002103	Acp2	Acp-2|LAP	acid phosphatase 2, lysosomal	protein-coding
common_peak2-30217-23-29--0.185123091099438-0.336580821310529	chr7	132315978	132317387	+	0	NA	Intergenic	RMER1A|Other|Other	176618	NR_045804	71208	Mm.159465	NM_172408		4933440M02Rik	-	RIKEN cDNA 4933440M02 gene	ncRNA
unique_peak1-5235-10-4-1.03448725012141-1.5150158574804	chr5	43841729	43842326	+	0	NA	Intergenic	Intergenic	-64781	NM_001135172	109323	Mm.275553	NM_175425	ENSMUSG00000061535	C1qtnf7	5530401N20Rik|8430425G24Rik|Ctrp7	C1q and tumor necrosis factor related protein 7	protein-coding
common_peak2-22005-14-9-0.577288065470282-0.630231561310125	chr12	55473644	55474189	+	0	NA	Intergenic	Intergenic	18389	NR_033689	665239	Mm.26856	NR_033689		Gm7550	EG665239|Gm666	predicted gene 7550	ncRNA
unique_peak2-38033-3-10--1.87341470859657-1.75805390616669	chr6	38145105	38145632	+	0	NA	exon (NM_194061, exon 2 of 20)	exon (NM_194061, exon 2 of 20)	58641	NM_194061	330286	Mm.277163	NM_194061	ENSMUSG00000063455	D630045J12Rik	Kiaa1549|mKIAA1549	RIKEN cDNA D630045J12 gene	protein-coding
unique_peak2-34096-2-7--1.91745425626332-1.45399745587252	chr13	13389853	13390352	+	0	NA	Intergenic	L1_Rod|LINE|L1	95789	NM_031999	83924	Mm.379269	NM_031999	ENSMUSG00000021306	Gpr137b	AI788917|AU016435|AW546472|C730041E01|C80550|C80741|D13Abb1e|Tm7sf1	G protein-coupled receptor 137B	protein-coding
common_peak1-13284-134-90-1.23677486858073-11.6109526067191	chr19	38032291	38035225	+	0	NA	intron (NM_001099634, intron 20 of 52)	intron (NM_001099634, intron 20 of 52)	84309	NM_001099634	226101	Mm.34674	NM_177035	ENSMUSG00000048612	Myof	2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3	myoferlin	protein-coding
common_peak2-31559-8-13--0.802132504110034-0.562038191119711	chr8	116992924	116993579	+	0	NA	intron (NM_019573, intron 4 of 8)	B3A|SINE|B2	29699	NM_019573	80707	Mm.440420	NM_019573	ENSMUSG00000004637	Wwox	5330426P09Rik|9030416C10Rik|WOX1	WW domain-containing oxidoreductase	protein-coding
unique_peak2-39607-3-9--1.73591118484664-1.57096726280955	chr9	81863452	81863911	+	0	NA	intron (NM_175213, intron 3 of 4)	intron (NM_175213, intron 3 of 4)	106330	NM_175213	75033	Mm.335329	NM_175213	ENSMUSG00000043289	Mei4	4930486G11Rik	meiosis-specific, MEI4 homolog (S. cerevisiae)	protein-coding
unique_peak1-6673-21-5-1.98452676454508-3.24127775360835	chr8	22744531	22745450	+	0	NA	Intergenic	Intergenic	16350	NM_001079933	626708	Mm.305275	NM_001079933	ENSMUSG00000060070	Defa26	Defcr26	defensin, alpha, 26	protein-coding
unique_peak1-6825-12-8-0.478850983645327-0.562038191119709	chr8	78801098	78801722	+	0	NA	Intergenic	Intergenic	622662	NR_028579	100039211	Mm.367571	NR_028579	ENSMUSG00000074235	Gm10649	ENSMUSG00000074235	predicted gene 10649	ncRNA
unique_peak1-2799-12-4-1.32684789020028-2.04196296489515	chr17	15192948	15193544	+	0	NA	intron (NM_001039552, intron 12 of 17)	intron (NM_001039552, intron 12 of 17)	3223	NM_001034891	381062	Mm.393767	NM_183133	ENSMUSG00000036552	Ermard	2210404J11Rik|2410011O22Rik|AI448938	ER membrane associated RNA degradation	protein-coding
unique_peak2-35570-6-10--0.894033508256995-1.21398586181642	chr17	70729056	70729473	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-44868	NM_177639	224997	Mm.311840	NM_027712	ENSMUSG00000003279	Dlgap1	4933422O14Rik|9630002F18|AI845682|AI848168|BB075781|D17Bwg0511e|GKAP/SAPAP|GKPA/SAPAP|Gkap|Sapap1|mKIAA4162	discs, large (Drosophila) homolog-associated protein 1	protein-coding
common_peak1-13757-14-15--0.100783839642355-0.301029995663982	chr2	34406745	34407463	+	0	NA	intron (NM_001290625, intron 7 of 11)	B1_Mus2|SINE|Alu	144733	NM_001290626	227743	Mm.270866	NM_177345	ENSMUSG00000038696	Mapkap1	AI591529|D230039K05Rik|Sin1	mitogen-activated protein kinase associated protein 1	protein-coding
common_peak1-9480-26-15-0.927899092158462-1.40782320807777	chr11	106588202	106589253	+	0	NA	Intergenic	Intergenic	-12132	NM_008816	18613	Mm.343951	NM_008816	ENSMUSG00000020717	Pecam1	C85791|Cd31|PECAM-1|Pecam	platelet/endothelial cell adhesion molecule 1	protein-coding
common_peak2-24774-30-47--0.415287091229283-0.618527319161325	chr17	56673136	56674142	+	0	NA	Intergenic	(TGGA)n|Simple_repeat|Simple_repeat	-21733	NM_011483	20834	Mm.76862	NM_011483	ENSMUSG00000044526	Znrf4	1700094M01Rik|Ssrzf1|spzn	zinc and ring finger 4	protein-coding
unique_peak1-4613-10-4-1.03448725012141-1.5150158574804	chr3	68508886	68509505	+	0	NA	Intergenic	Lx3C|LINE|L1	13849	NM_008351	16159	Mm.103783	NM_008351	ENSMUSG00000027776	Il12a	IL-12p35|Il-12a|Ll12a|p35	interleukin 12a	protein-coding
unique_peak2-34795-6-7--0.434601889619698-0.97990265578305	chr15	68300843	68301306	+	0	NA	Intergenic	Intergenic	-128223	NR_029718	387228		NR_029718	miRBase:MI0000549	Mir30d	Mirn30d|mmu-mir-30d	microRNA 30d	ncRNA
unique_peak1-290-12-3-1.64877598508764-2.36932189928148	chr1	121397833	121398532	+	0	NA	intron (NM_022327, intron 1 of 4)	intron (NM_022327, intron 1 of 4)	3177	NM_022327	64143	Mm.27832	NM_022327	ENSMUSG00000004451	Ralb	5730472O18Rik	v-ral simian leukemia viral oncogene homolog B (ras related)	protein-coding
common_peak1-12841-9-6-0.382258484346616-1.11707584880836	chr18	70599072	70599589	+	0	NA	Intergenic	Intergenic	-32778	NM_029019	170461	Mm.83623	NM_029019	ENSMUSG00000079608	Stard6	1700011K09Rik|4833424I06Rik|4933429L05Rik|AI644424	StAR-related lipid transfer (START) domain containing 6	protein-coding
common_peak1-13679-12-8-0.478850983645327-0.562038191119709	chr2	29060193	29060702	+	0	NA	intron (NM_133500, intron 3 of 6)	intron (NM_133500, intron 3 of 6)	43113	NM_133501	171171	Mm.442448	NM_133500	ENSMUSG00000035513	Ntng2	2610016D08Rik|Lmnt2	netrin G2	protein-coding
common_peak2-27756-10-9-0.0344872501214071-1.05503135781948	chr3	127928342	127928875	+	0	NA	intron (NR_045704, intron 1 of 5)	L1Md_F3|LINE|L1	5915	NR_045704	402774	Mm.209170	NR_045704		D030025E07Rik	-	RIKEN cDNA D030025E07 gene	ncRNA
unique_peak2-35110-7-8--0.370834171144123-1.00793137938329	chr16	23980030	23980543	+	0	NA	intron (NM_009744, intron 1 of 9)	intron (NM_009744, intron 1 of 9)	8412	NM_009744	12053	Mm.347398	NM_009744	ENSMUSG00000022508	Bcl6	Bcl5	B cell leukemia/lymphoma 6	protein-coding
common_peak1-19470-26-13-1.12054417010086-1.80107744087171	chrX	126777511	126778270	+	0	NA	intron (NM_172493, intron 23 of 26)	intron (NM_172493, intron 23 of 26)	493612	NM_172493	54004	Mm.10763	NM_017398	ENSMUSG00000034480	Diap2	Dia3|Diaph2|Drf2|E430022I22Rik	diaphanous homolog 2 (Drosophila)	protein-coding
unique_peak1-5422-12-5-1.06381348436648-1.78669045979184	chr5	113206752	113207522	+	0	NA	intron (NM_028901, intron 33 of 43)	intron (NM_028901, intron 33 of 43)	-15175	NR_040675	67360	Mm.59218	NR_040675	ENSMUSG00000098230	1700095B10Rik	-	RIKEN cDNA 1700095B10 gene	ncRNA
common_peak2-20957-8-5-0.420259917226415-1.10484139239135	chr11	17952856	17953111	+	0	NA	Intergenic	Intergenic	-99105	NM_026576	68145	Mm.178684	NM_026576	ENSMUSG00000016984	Etaa1	5730466H23Rik|AA672646	Ewing tumor-associated antigen 1	protein-coding
common_peak2-26692-39-58--0.266881802442688-0.465606867440106	chr2	126875303	126876815	+	0	NA	intron (NM_175550, intron 14 of 20)	Lx9|LINE|L1	-20334	NM_026678	109778	Mm.22028	NM_026678	ENSMUSG00000001999	Blvra	0610006A11Rik|2500001N03Rik|Blvr	biliverdin reductase A	protein-coding
common_peak1-10260-27-25-0.291106232754144-0.488172498216822	chr13	55509810	55510809	+	0	NA	intron (NM_011392, intron 9 of 12)	intron (NM_011392, intron 9 of 12)	6284	NM_029303	75477	Mm.432537	NM_029303		Pfn3	1700012P12Rik	profilin 3	protein-coding
unique_peak2-37599-5-7--0.704380336005853-1.01466476204226	chr5	53553289	53553633	+	0	NA	intron (NM_172710, intron 9 of 23)	intron (NM_172710, intron 9 of 23)	51230	NM_172710	231238	Mm.235020	NM_172710	ENSMUSG00000029189	Sel1l3	2310045A20Rik|AI429585|mKIAA0746	sel-1 suppressor of lin-12-like 3 (C. elegans)	protein-coding
unique_peak1-3489-8-6-0.197867495889966-1.03789460276074	chr19	10869344	10870055	+	0	NA	intron (NM_001037801, intron 6 of 11)	intron (NM_001037801, intron 6 of 11)	34849	NM_001037801	12511	Mm.290897	NM_009852	ENSMUSG00000024670	Cd6	-	CD6 antigen	protein-coding
unique_peak2-36172-1-14--3.53394760582526-3.64038867156802	chr2	28937250	28937981	+	0	NA	intron (NM_009442, intron 9 of 11)	intron (NM_009442, intron 9 of 11)	21832	NM_009442	22130	Mm.252195	NM_009442	ENSMUSG00000026803	Ttf1	AV245725|TTF-1|TTF-I	transcription termination factor, RNA polymerase I	protein-coding
unique_peak1-3285-7-1-1.79909083029819-1.80617997398389	chr18	74511461	74511970	+	0	NA	intron (NR_029424, intron 8 of 8)	intron (NR_029424, intron 8 of 8)	68961	NM_028948	74453	Mm.182293	NM_028948	ENSMUSG00000035394	Ccdc11	4933415I03Rik	coiled-coil domain containing 11	protein-coding
common_peak1-17992-27-20-0.599228528116475-0.90781512069806	chr7	139252745	139254050	+	0	NA	intron (NM_018867, intron 8 of 13)	MTD|LTR|MaLR	93027	NM_018867	55987	Mm.471654	NM_018867	ENSMUSG00000030862	Cpxm2	4632435C11Rik|CPX-2|Cpx2	carboxypeptidase X 2 (M14 family)	protein-coding
common_peak2-29748-38-39-0.249524564411168-0.503563708672202	chr6	86472256	86473341	+	0	NA	Intergenic	Intergenic	3361	NM_011865	23983	Mm.274146	NM_011865	ENSMUSG00000051695	Pcbp1	WBP17|[a]CP-1|alphaCP-1	poly(rC) binding protein 1	protein-coding
common_peak2-25334-32-23-0.694129518498504-1.20786488037717	chr18	76160760	76161590	+	0	NA	intron (NM_145356, intron 2 of 4)	intron (NM_145356, intron 2 of 4)	96950	NR_045365	73009	Mm.443541	NR_045365		2900057B20Rik	-	RIKEN cDNA 2900057B20 gene	ncRNA
unique_peak2-33445-4-4--0.345388608740609-0.864171920961574	chr11	62558775	62559207	+	0	NA	Intergenic	Intergenic	-16396	NM_133208	170740	Mm.339982	NM_133208		Zfp287	B230333C16Rik|SKAT-2|Skat2|Znf287|mszf16|mszf74	zinc finger protein 287	protein-coding
common_peak2-30682-7-20--1.59322659248057-1.71830443967823	chr7	108934270	108934822	+	0	NA	intron (NM_009191, intron 12 of 15)	intron (NM_009191, intron 12 of 15)	-32281	NM_008887	11859	Mm.5028	NM_008887	ENSMUSG00000007946	Phox2a	Arix|Phox2|Pmx2|Pmx2a	paired-like homeobox 2a	protein-coding
unique_peak2-33541-7-10--0.660340788339108-1.12966497611638	chr11	78322459	78323015	+	0	NA	intron (NM_199199, intron 3 of 5)	B2_Mm1t|SINE|B2	2933	NM_199199	195040	Mm.383431	NM_199199	ENSMUSG00000051232	Tmem199	AI316787|AI848469|R74819	transmembrane protein 199	protein-coding
unique_peak1-2782-8-3-1.00522241794757-1.39487600375387	chr17	10839597	10840101	+	0	NA	intron (NM_027032, intron 2 of 4)	intron (NM_027032, intron 2 of 4)	190767	NR_077238	319750	Mm.383485	NR_077237	ENSMUSG00000089633	A230009B12Rik	-	RIKEN cDNA A230009B12 gene	ncRNA
unique_peak2-37120-5-7--0.704380336005853-1.01466476204226	chr4	9660849	9661253	+	0	NA	Intergenic	MMERVK10C-int|LTR|ERVK	-36681	NR_030693	320152	Mm.159946	NR_030693		4930412C18Rik	5730591J02Rik	RIKEN cDNA 4930412C18 gene	ncRNA
common_peak1-18150-14-9-0.577288065470282-0.630231561310125	chr8	11477259	11478007	+	0	NA	intron (NM_011227, intron 1 of 1)	ID_B1|SINE|B4	866	NM_011227	19332	Mm.37632	NM_011227		Rab20	AA536966|D8Ertd350e	RAB20, member RAS oncogene family	protein-coding
common_peak2-30766-28-69--1.0763238971235-3.12041931051542	chr7	123369292	123370862	+	0	NA	Intergenic	RMER15|LTR|ERVL	-36722	NM_172743	233765	Mm.3741	NM_172743	ENSMUSG00000045659	Plekha7	A430081P20Rik|AI414265	pleckstrin homology domain containing, family A member 7	protein-coding
unique_peak2-33005-5-8--0.874305337448166-1.10484139239135	chr10	61670199	61670758	+	0	NA	intron (NM_197996, intron 1 of 7)	intron (NM_197996, intron 1 of 7)	-13503	NR_106122	102465767		NR_106122		Mir7662	mmu-mir-7662	microRNA mir-7662	ncRNA
common_peak1-10368-8-6-0.197867495889966-1.03789460276074	chr13	91911621	91911957	+	0	NA	intron (NM_028790, intron 8 of 14)	intron (NM_028790, intron 8 of 14)	-30312	NR_028313	373852	Mm.466817	NR_015501	ENSMUSG00000074782	4833422C13Rik	-	RIKEN cDNA 4833422C13 gene	ncRNA
common_peak2-24038-11-8-0.338768582809301-1.14218153353838	chr16	24435133	24435670	+	0	NA	intron (NM_178665, intron 1 of 12)	intron (NM_178665, intron 1 of 12)	-12776	NM_001145952	210126	Mm.209385	NM_178665	ENSMUSG00000033306	Lpp	9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16	LIM domain containing preferred translocation partner in lipoma	protein-coding
unique_peak1-4904-7-6--0.00826409175941478-0.97990265578305	chr4	45514818	45515254	+	0	NA	intron (NM_001033306, intron 1 of 5)	intron (NM_001033306, intron 1 of 5)	28664	NM_001033306	230126	Mm.251716	NM_001033306	ENSMUSG00000044813	Shb	BC028832	src homology 2 domain-containing transforming protein B	protein-coding
common_peak2-19878-6-4-0.24347001549294-0.989110657569874	chr1	93678397	93678740	+	0	NA	Intergenic	Intergenic	-19486	NM_007855	13345	Mm.9474	NM_007855	ENSMUSG00000007805	Twist2	Dermo1|bHLHa39	twist basic helix-loop-helix transcription factor 2	protein-coding
common_peak2-26576-42-43-0.282897709229887-0.572487971606918	chr2	104705924	104706871	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-16390	NM_178695	228413	Mm.259609	NM_178695	ENSMUSG00000027171	Prrg4	9930111I18Rik|TMG4	proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	protein-coding
unique_peak1-3546-9-1-2.18961340640422-2.31132995230379	chr19	24007474	24008077	+	0	NA	intron (NM_177034, intron 6 of 12)	intron (NM_177034, intron 6 of 12)	97734	NM_001114174	381217	Mm.426078	NM_001114174	ENSMUSG00000071604	Fam189a2	AI414343|AI666772|Gm967	family with sequence similarity 189, member A2	protein-coding
common_peak1-10590-35-14-1.52447966285399-3.65980906459644	chr14	30564022	30565355	+	0	NA	Intergenic	Intergenic	-29638	NM_009785	12294	Mm.386754	NM_009785	ENSMUSG00000021991	Cacna2d3	Cacnad3	calcium channel, voltage-dependent, alpha2/delta subunit 3	protein-coding
common_peak1-9685-8-11--0.579740082773585-1.14218153353838	chr12	14150266	14150828	+	0	NA	Intergenic	Intergenic	8297	NM_029007	105005	Mm.227253	NM_029007	ENSMUSG00000020607	Fam84a	2310003N02Rik|4731402F03Rik|AW125753|Nse1	family with sequence similarity 84, member A	protein-coding
common_peak1-11214-12-11-0.0638134843664826-0.337263207250336	chr15	78934962	78935520	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	-4172	NM_177461	27008	Mm.196480	NM_177461	ENSMUSG00000033039	Micall1	260|AI448246|D15Mit260|D15N2e|EST573322|EST820961|MIRab13|mKIAA1668	microtubule associated monooxygenase, calponin and LIM domain containing -like 1	protein-coding
unique_peak2-38911-0-6--3.64748585253182-1.56314192529759	chr8	13759527	13759822	+	0	NA	intron (NM_027276, intron 3 of 17)	B3A|SINE|B2	1984	NM_027276	69957	Mm.182412	NM_027276	ENSMUSG00000038416	Cdc16	2700071J12Rik|2810431D22Rik|APC6	CDC16 cell division cycle 16	protein-coding
unique_peak1-3908-29-13-1.30493515855751-2.5745355257554	chr2	24335143	24336208	+	0	NA	Intergenic	Intergenic	-4556	NM_011040	18510	Mm.2533	NM_011040	ENSMUSG00000026976	Pax8	Pax-8	paired box 8	protein-coding
unique_peak1-984-9-1-2.18961340640422-2.31132995230379	chr11	67839717	67840211	+	0	NA	intron (NM_018768, intron 6 of 7)	B3|SINE|B2	59979	NM_018768	55943	Mm.3973	NM_018768	ENSMUSG00000020903	Stx8	0610007H08Rik|1110002H11Rik|4930571E13Rik|CARB	syntaxin 8	protein-coding
common_peak1-17900-16-29--0.788626953340457-0.98872314135509	chr7	121706800	121707476	+	0	NA	promoter-TSS (NM_177382)	promoter-TSS (NM_177382)	-652	NM_177382	244209	Mm.108037	NM_177382	ENSMUSG00000030670	Cyp2r1	-	cytochrome P450, family 2, subfamily r, polypeptide 1	protein-coding
unique_peak1-5786-17-2-2.63333383748388-3.75443312462699	chr6	56919541	56920332	+	0	NA	Intergenic	Intergenic	13429	NM_134176	171194	Mm.222754	NM_134176	ENSMUSG00000071893	Vmn1r4	C230065D10Rik|V1rc21	vomeronasal 1 receptor 4	protein-coding
unique_peak1-349-11-2-1.92373108353046-2.32232533660526	chr1	135720030	135720605	+	0	NA	Intergenic	Intergenic	-69993	NM_213616	381290	Mm.188617	NM_213616	ENSMUSG00000026463	Atp2b4	Pmca4	ATPase, Ca++ transporting, plasma membrane 4	protein-coding
common_peak2-28240-23-30--0.232428805877794-0.363124929330844	chr4	123411787	123412820	+	0	NA	TTS (NM_023423)	TTS (NM_023423)	15239	NM_023423	68050	Mm.27903	NM_023423		Akirin1	6330407G11Rik	akirin 1	protein-coding
unique_peak2-35735-6-8--0.60452689106201-1.03789460276074	chr18	36281972	36282380	+	0	NA	intron (NM_001167891, intron 1 of 9)	intron (NM_001167891, intron 1 of 9)	16319	NR_015571	74966	Mm.379238	NM_030089		4930471G03Rik	1700007N01Rik	RIKEN cDNA 4930471G03 gene	ncRNA
common_peak1-11815-22-43--0.812147513549893-1.34810744351377	chr16	65561912	65562846	+	0	NA	intron (NM_026879, intron 1 of 5)	intron (NM_026879, intron 1 of 5)	563	NM_026879	68942	Mm.432944	NM_026879	ENSMUSG00000004843	Chmp2b	1190006E07Rik	charged multivesicular body protein 2B	protein-coding
unique_peak2-37001-2-6--1.72480917832092-1.26211192963361	chr3	121687208	121687585	+	0	NA	intron (NM_172525, intron 3 of 22)	intron (NM_172525, intron 3 of 22)	31152	NM_172525	214137	Mm.229287	NM_172525	ENSMUSG00000039831	Arhgap29	6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1	Rho GTPase activating protein 29	protein-coding
common_peak1-10576-8-8--0.164702583494742-1.00793137938329	chr14	25823524	25824100	+	0	NA	Intergenic	Intergenic	138915	NR_045718	75862	Mm.109191	NR_045718		4930572O13Rik	-	RIKEN cDNA 4930572O13 gene	ncRNA
common_peak1-9110-21-9-1.24756117037887-1.83731222263754	chr11	72506058	72506926	+	0	NA	intron (NM_009671, intron 1 of 24)	(TA)n|Simple_repeat|Simple_repeat	2988	NM_009671	11736	Mm.10313	NM_009671	ENSMUSG00000020790	Ankfy1	Ankhzn|ZFYVE14|mKIAA1255	ankyrin repeat and FYVE domain containing 1	protein-coding
common_peak1-13795-32-37-0.0311645057760748-0.312460117298692	chr2	39004210	39005420	+	0	NA	intron (NM_178778, intron 2 of 17)	intron (NM_178778, intron 2 of 17)	12940	NR_033526	100042584	Mm.451696	NR_033526		Gm16523	A130054J05Rik	mitochondrial ribosomal protein L40 pseudogene	pseudo
common_peak1-15567-44-64--0.200474978459919-0.389014771016025	chr4	126202185	126203549	+	0	NA	intron (NM_153177, intron 2 of 17)	intron (NM_153177, intron 2 of 17)	7835	NM_153177	76850	Mm.86705	NM_153177	ENSMUSG00000042500	Ago4	5730550L01Rik|AI481660|Eif2c4	argonaute RISC catalytic subunit 4	protein-coding
unique_peak1-4581-10-2-1.77145284428761-2.09384600808989	chr3	57346538	57347105	+	0	NA	intron (NM_133784, intron 2 of 6)	intron (NM_133784, intron 2 of 6)	32977	NM_133784	97064	Mm.405029	NM_133784	ENSMUSG00000027803	Wwtr1	2310058J06Rik|2610021I22Rik|C78399|Taz	WW domain containing transcription regulator 1	protein-coding
unique_peak2-38075-4-5--0.608423014574403-0.909929411522249	chr6	50400413	50400832	+	0	NA	intron (NM_001163645, intron 1 of 21)	RLTR11A2|LTR|ERVK	5547	NM_001163645	71720	Mm.44153	NM_027881	ENSMUSG00000029822	Osbpl3	1200014M06Rik|6720421I08Rik|A530055M08|ORP3|OSBP3	oxysterol binding protein-like 3	protein-coding
common_peak1-10977-47-39-0.612913329879185-1.36066917175235	chr15	31186496	31187860	+	0	NA	intron (NM_146057, intron 2 of 3)	intron (NM_146057, intron 2 of 3)	33038	NM_146057	223453	Mm.222867	NM_146057	ENSMUSG00000039168	Dap	4921531N22Rik|AI789753|AU040360	death-associated protein	protein-coding
unique_peak1-6560-9-5-0.604650905683064-1.21398586181642	chr7	130754096	130754629	+	0	NA	Intergenic	L1Md_A|LINE|L1	-110399	NM_001081329	210162	Mm.135397	NM_175435	ENSMUSG00000030757	Zkscan2	9430065N20Rik|AW493225|Zfp694	zinc finger with KRAB and SCAN domains 2	protein-coding
common_peak2-26344-6-11--1.01956439034085-1.32595962126035	chr2	35590748	35591207	+	0	NA	Intergenic	PB1D9|SINE|Alu	38725	NM_001290639	69601	Mm.29629	NM_001001602	ENSMUSG00000026883	Dab2ip	2310011D08Rik|AI480459|Aip1|mKIAA1743	disabled 2 interacting protein	protein-coding
common_peak1-10545-31-47--0.359723829908033-0.560152715697887	chr14	18330857	18331889	+	0	NA	Intergenic	L1_Mur2|LINE|L1	-162101	NM_001113417	21834	Mm.32563	NM_009380	ENSMUSG00000021779	Thrb	Nr1a2|T3R[b]|T3Rbeta|Thrb1|Thrb2|c-erbAbeta	thyroid hormone receptor beta	protein-coding
unique_peak2-32932-9-21--1.26981821223308-1.37307999835977	chr10	30199938	30200708	+	0	NA	Intergenic	L1Md_F2|LINE|L1	120232	NM_028604	73681	Mm.294503	NM_028604	ENSMUSG00000019792	Trmt11	2410075D05Rik|3110045I18Rik|AW213713	tRNA methyltransferase 11	protein-coding
common_peak2-30659-29-55--0.695064841442493-1.27423323032613	chr7	100590783	100591589	+	0	NA	Intergenic	Lx9|LINE|L1	362797	NM_021427	58238	Mm.113787	NM_021427		Fam181b	A830059I20Rik|AB041569	family with sequence similarity 181, member B	protein-coding
common_peak2-30931-17-12-0.517856620063946-0.647240723060192	chr7	145110467	145110941	+	0	NA	Intergenic	CT-rich|Low_complexity|Low_complexity	478709	NM_183289	70571	Mm.334297	NM_183289	ENSMUSG00000091002	Tcerg1l	5730476P14Rik	transcription elongation regulator 1-like	protein-coding
unique_peak2-33077-7-8--0.370834171144123-1.00793137938329	chr10	79927356	79927753	+	0	NA	Intergenic	Intergenic	-30097	NM_139226	246086	Mm.250572	NM_139226	ENSMUSG00000045518	Onecut3	OC-3|Oc3	one cut domain, family member 3	protein-coding
common_peak2-31908-81-105-0.144129148445367-0.441950931670488	chr9	59485484	59487131	+	0	NA	intron (NR_038074, intron 16 of 22)	B4|SINE|B4	-17868	NM_011099	18746	Mm.326167	NM_011099	ENSMUSG00000032294	Pkm	AA414905|AL024370|AL024424|Pk-2|Pk-3|Pk3|Pkm2	pyruvate kinase, muscle	protein-coding
common_peak1-10293-12-7-0.648775985087639-0.697979855752659	chr13	63252783	63253314	+	0	NA	intron (NM_001289926, intron 5 of 15)	B4|SINE|B4	-88290	NR_110520	72061	Mm.188105	NM_028079	ENSMUSG00000021458	2010111I01Rik	2300006M17Rik|AP-O|Aopep	RIKEN cDNA 2010111I01 gene	protein-coding
common_peak1-14331-10-5-0.771452844287613-1.33892459842472	chr2	164440340	164440912	+	0	NA	intron (NM_001012725, intron 2 of 3)	intron (NM_001012725, intron 2 of 3)	1426	NM_001012725	433502	Mm.376157	NM_001012725	ENSMUSG00000070531	Wfdc6b	WAP6b|Wfdc6	WAP four-disulfide core domain 6B	protein-coding
common_peak2-24860-25-41--0.530467517433655-0.749946955723563	chr17	78417467	78418236	+	0	NA	Intergenic	L1M4b|LINE|L1	-181737	NM_015800	50766	Mm.311912	NM_015800	ENSMUSG00000024074	Crim1	AU015004	cysteine rich transmembrane BMP regulator 1 (chordin like)	protein-coding
unique_peak1-1641-11-2-1.92373108353046-2.32232533660526	chr13	51883781	51884467	+	0	NA	intron (NM_001281880, intron 1 of 16)	L1MB5|LINE|L1	4992	NM_001281880	20354	Mm.33903	NM_013660	ENSMUSG00000021451	Sema4d	CD100|Semacl2|Semaj|Semcl2|coll-4	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D	protein-coding
unique_peak1-5845-8-5-0.420259917226415-1.10484139239135	chr6	82760376	82760843	+	0	NA	Intergenic	Intergenic	-36161	NM_013820	15277	Mm.255848	NM_013820	ENSMUSG00000000628	Hk2	AI642394|HKII	hexokinase 2	protein-coding
common_peak2-22034-21-20-0.177171842487475-0.380101753845079	chr12	69168418	69169009	+	0	NA	Intergenic	MTC|LTR|MaLR	-398455	NR_033146	100316870	Mm.379794	NR_033146		Gm17821	-	DDB1 and CUL4 associated factor 5 pseudogene	pseudo
common_peak2-24924-7-7--0.200909169701811-0.97990265578305	chr17	87302289	87302724	+	0	NA	Intergenic	L4|LINE|RTE	-14182	NM_001277980	78469	Mm.67234	NM_030104	ENSMUSG00000037689	Tmem247	1700090G07Rik	transmembrane protein 247	protein-coding
common_peak2-24384-17-28--0.639684656922534-0.677583764578261	chr17	12318193	12319247	+	0	NA	intron (NM_026644, intron 1 of 8)	intron (NM_026644, intron 1 of 8)	6570	NM_026644	68262	Mm.258300	NM_026644	ENSMUSG00000023827	Agpat4	1500003P24Rik	1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)	protein-coding
common_peak1-19114-15-20--0.380152672223105-0.397739447719386	chr9	75625352	75626177	+	0	NA	intron (NM_007555, intron 1 of 6)	intron (NM_007555, intron 1 of 6)	2592	NM_007555	12160	Mm.428950	NM_007555		Bmp5	AU023399|se	bone morphogenetic protein 5	protein-coding
common_peak2-23282-14-15--0.100783839642355-0.301029995663982	chr15	27992348	27992984	+	0	NA	Intergenic	Intergenic	-37063	NM_001081302	223435	Mm.485422	NM_001081302	ENSMUSG00000022263	Trio	6720464I07Rik|AA408740|Solo	triple functional domain (PTPRF interacting)	protein-coding
common_peak1-17339-116-80-1.1542793306248-8.872008273837	chr6	148944095	148946370	+	0	NA	intron (NM_177192, intron 20 of 20)	B1_Mur1|SINE|Alu	-50278	NM_019643	56306	Mm.18637	NM_019643	ENSMUSG00000039985	Fam60a	Ppcs1|Pptcs1|Tera	family with sequence similarity 60, member A	protein-coding
unique_peak2-37840-2-14--2.82434485187184-3.03832868024006	chr5	134942969	134943477	+	0	NA	Intergenic	PB1D7|SINE|Alu	-10637	NM_001081464	57080	Mm.332735	NM_020331	ENSMUSG00000023079	Gtf2ird1	1700012P16Rik|BEN|Cream1|ESTM9|GTF3|Gtf2il|MusTRD1|Tg(Alb1-Myc)166.8Sst|WBSCR11|X83320	general transcription factor II I repeat domain-containing 1	protein-coding
unique_peak2-35254-0-5--3.42509343119537-1.32905871926422	chr17	71827230	71827659	+	0	NA	Intergenic	B1F1|SINE|Alu	-2761	NM_028887	74355	Mm.194450	NM_028887	ENSMUSG00000024054	Smchd1	4931400A14Rik|AW554188|MommeD1|mKIAA0650	SMC hinge domain containing 1	protein-coding
common_peak2-21830-212-310-0.261872820455688-1.5646957729414	chr11	120347659	120350917	+	0	NA	intron (NM_027204, intron 3 of 4)	intron (NM_027204, intron 3 of 4)	3305	NM_027204	56282	Mm.133851	NM_027204		Mrpl12	0610034O11Rik|1500031N16Rik|MRP-L12|Rpml12	mitochondrial ribosomal protein L12	protein-coding
unique_peak2-34618-4-6--0.830815435910851-0.989110657569874	chr14	76507866	76508344	+	0	NA	intron (NM_026177, intron 1 of 7)	intron (NM_026177, intron 1 of 7)	2517	NM_026177	67467	Mm.260767	NM_026177	ENSMUSG00000022008	Gpalpp1	1200011I18Rik|Kiaa1704	GPALPP motifs containing 1	protein-coding
common_peak1-17805-28-46--0.501629731856175-0.767679714496325	chr7	100582631	100583455	+	0	NA	Intergenic	Intergenic	354654	NM_021427	58238	Mm.113787	NM_021427		Fam181b	A830059I20Rik|AB041569	family with sequence similarity 181, member B	protein-coding
unique_peak2-36475-1-6--2.43441193227435-1.56314192529759	chr2	148274617	148274974	+	0	NA	Intergenic	RMER10B|LTR|ERVL	-5524	NM_010740	17064	Mm.681	NM_010740	ENSMUSG00000027435	Cd93	6030404G09Rik|AA145088|AA4.1|AW555904|C1qr1|C1qrp|Ly68	CD93 antigen	protein-coding
unique_peak1-5746-22-2-3.06232160436625-5.33257845442771	chr6	48864833	48865855	+	0	NA	Intergenic	Intergenic	10359	NM_001161621	76507	Mm.213898	NM_029638	ENSMUSG00000029811	Aoc1	1600012D06Rik|Abp1|DAO	amine oxidase, copper-containing 1	protein-coding
common_peak2-30342-7-8--0.370834171144123-1.00793137938329	chr7	25788620	25789099	+	0	NA	intron (NM_001290469, intron 1 of 22)	intron (NM_001290469, intron 1 of 22)	2097	NM_001290469	232975	Mm.44101	NM_144921	ENSMUSG00000040907	Atp1a3	Atpa-2	ATPase, Na+/K+ transporting, alpha 3 polypeptide	protein-coding
common_peak1-15314-20-13-0.680719862533589-0.809260849721102	chr4	45408061	45408779	+	0	NA	TTS (NM_001009949)	TTS (NM_001009949)	13218	NM_001009949	230125	Mm.260210	NM_001009949	ENSMUSG00000045973	Slc25a51	9130208E07Rik|D130005A03Rik|Gm138|Mcart1	solute carrier family 25, member 51	protein-coding
unique_peak1-4125-14-6-1.09186123830004-1.16633110333236	chr2	90490439	90491072	+	0	NA	Intergenic	L1MC|LINE|L1	-26617	NM_021512	59015	Mm.24532	NM_021512	ENSMUSG00000051329	Nup160	160kDa|2810011M03Rik|AA414952|AU020188|Gtl-13|Gtl1-13|Gtl13|mKIAA0197	nucleoporin 160	protein-coding
unique_peak1-2671-7-3-0.799090830298189-1.23214870625617	chr16	56074523	56075038	+	0	NA	promoter-TSS (NM_001003971)	promoter-TSS (NM_001003971)	-742	NM_025483	66315	Mm.255784	NM_025483	ENSMUSG00000052917	Senp7	2410152H17Rik|2810413I22Rik|2900036C23Rik|6030449K19Rik|AI790676|mKIAA1707	SUMO1/sentrin specific peptidase 7	protein-coding
unique_peak1-7164-9-4-0.867685311516858-1.36011389749466	chr9	58708883	58709656	+	0	NA	TTS (NM_001081192)	TTS (NM_001081192)	37950	NM_001081192	330953	Mm.151967	NM_001081192	ENSMUSG00000032338	Hcn4	Bcng3|Hcn3	hyperpolarization-activated, cyclic nucleotide-gated K+ 4	protein-coding
common_peak1-8958-13-18--0.469455482805817-0.409888142029227	chr11	55417681	55418222	+	0	NA	intron (NM_001290821, intron 1 of 8)	intron (NM_001290821, intron 1 of 8)	3749	NM_001290821	14654	Mm.89320	NM_020492		Glra1	nmf11|oscillator|ot|spasmodic|spd	glycine receptor, alpha 1 subunit	protein-coding
common_peak2-21545-20-18-0.240147271147608-0.388034239052786	chr11	95981749	95982493	+	0	NA	Intergenic	Intergenic	-8845	NM_001271018	76815	Mm.296049	NM_029755	ENSMUSG00000006056	Calcoco2	2410154J16Rik|C77254|Ndp52|Ndp52l1	calcium binding and coiled-coil domain 2	protein-coding
common_peak2-28100-14-13-0.0918612383000403-0.332077462497413	chr4	88782046	88782706	+	0	NA	promoter-TSS (NM_024433)	promoter-TSS (NM_024433)	-898	NM_024433	66902	Mm.28500	NM_024433	ENSMUSG00000062937	Mtap	1300019I21Rik|MSAP	methylthioadenosine phosphorylase	protein-coding
unique_peak1-4943-6-1-1.5653981103803-1.56314192529759	chr4	89106082	89106412	+	0	NA	Intergenic	Intergenic	-149306	NM_007670	12579	Mm.423094	NM_007670	ENSMUSG00000073802	Cdkn2b	AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b	cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)	protein-coding
common_peak2-21417-17-18--0.0296311752385474-0.306899554715732	chr11	84067955	84069075	+	0	NA	intron (NM_133360, intron 14 of 53)	intron (NM_133360, intron 14 of 53)	59575	NM_133360	107476	Mm.31374	NM_133360	ENSMUSG00000020532	Acaca	A530025K05Rik|Acac|Acc1|Gm738	acetyl-Coenzyme A carboxylase alpha	protein-coding
common_peak1-12874-112-182--0.0824495379637602-0.350581576384111	chr18	76240886	76242904	+	0	NA	intron (NM_145356, intron 3 of 4)	intron (NM_145356, intron 3 of 4)	16230	NR_045365	73009	Mm.443541	NR_045365		2900057B20Rik	-	RIKEN cDNA 2900057B20 gene	ncRNA
common_peak1-17877-11-44--1.98315951207806-4.90496913713224	chr7	116443542	116444076	+	0	NA	intron (NM_054103, intron 13 of 13)	L1_Mus1|LINE|L1	-129987	NM_057173	109594	Mm.360145	NM_057173	ENSMUSG00000036111	Lmo1	Rbtn-1|Rbtn1|Ttg1	LIM domain only 1	protein-coding
common_peak2-27100-247-331-0.433857738917348-4.13133330190899	chr3	145650120	145654341	+	0	NA	intron (NM_001166064, intron 1 of 6)	URR1B|DNA|MER1_type	1396	NM_001166064	214804	Mm.268854	NM_001166064	ENSMUSG00000036863	Syde2	C430017H16Rik	synapse defective 1, Rho GTPase, homolog 2 (C. elegans)	protein-coding
common_peak2-22652-23-37--0.526160008934505-0.720235944639228	chr13	94284486	94285708	+	0	NA	Intergenic	Intergenic	-15334	NM_021310	57748	Mm.100273	NM_021310	ENSMUSG00000021690	Jmy	-	junction-mediating and regulatory protein	protein-coding
unique_peak2-36825-14-11-0.314253659636488-0.435191258261915	chr3	88490139	88490824	+	0	NA	exon (NM_028814, exon 2 of 14)	exon (NM_028814, exon 2 of 14)	765	NM_028814	74200	Mm.251800	NM_028814	ENSMUSG00000028060	2810403A07Rik	A430106P18Rik|AI256352|AI451678|Blom7|Kiaa0907	RIKEN cDNA 2810403A07 gene	protein-coding
common_peak2-22277-21-31--0.430510734733764-0.49501414494053	chr13	8996105	8996762	+	0	NA	Intergenic	Intergenic	-1175	NM_027000	69237	Mm.41800	NM_027000	ENSMUSG00000021149	Gtpbp4	2610028C09Rik|Crfg|Gtpbp3|NGB|Nog1	GTP binding protein 4	protein-coding
common_peak2-26293-18-36--0.896534214400599-1.30767018140165	chr2	31688193	31689211	+	0	NA	intron (NM_178887, intron 4 of 6)	intron (NM_178887, intron 4 of 6)	12823	NM_178887	98970	Mm.32080	NM_178887	ENSMUSG00000026841	Fibcd1	AI448887	fibrinogen C domain containing 1	protein-coding
common_peak1-14161-11-17--0.661231417190699-0.58239619684445	chr2	137115151	137115680	+	0	NA	Intergenic	Intergenic	-173159	NM_013822	16449	Mm.22398	NM_013822	ENSMUSG00000027276	Jag1	ABE2|Gsfabe2|Htu|Ozz|Ser-1	jagged 1	protein-coding
common_peak2-23023-11-18--0.739233929191972-0.671582559449692	chr14	64949297	64949961	+	0	NA	intron (NM_001253715, intron 1 of 4)	ID_B1|SINE|B4	86164	NM_001253716	110265	Mm.26713	NM_026322	ENSMUSG00000054733	Msra	2310045J23Rik|6530413P12Rik|MSR-A	methionine sulfoxide reductase A	protein-coding
common_peak2-24630-18-22--0.210642804828661-0.321718508207525	chr17	34915440	34916158	+	0	NA	Intergenic	Intergenic	25572	NM_009995	13079	Mm.440407	NM_009995	ENSMUSG00000024365	Cyp21a1	21-OH|21OH|21OHA|21OHB|CYP21OH-A|Cyp21|Cyp21-ps1|Cyp21B|Cyp21a2-ps|Cyp21a2ps|Oh21-1|Oh21-2	cytochrome P450, family 21, subfamily a, polypeptide 1	protein-coding
unique_peak1-2455-13-4-1.45654393575041-2.23384849113406	chr15	102818817	102819458	+	0	NA	Intergenic	Intergenic	-1833	NM_010466	15426	Mm.6167	NM_010466	ENSMUSG00000001657	Hoxc8	D130011F21Rik|Hox-3.1	homeobox C8	protein-coding
unique_peak2-39566-8-14--0.901668177660948-0.660903317613906	chr9	70926898	70927748	+	0	NA	Intergenic	Intergenic	83117	NM_001271843	64008	Mm.449427	NM_022026	ENSMUSG00000032204	Aqp9	1700020I22Rik|AI266899|AQP-9	aquaporin 9	protein-coding
unique_peak1-2847-15-7-1.01216475055566-1.08658567012551	chr17	29447800	29448371	+	0	NA	Intergenic	ID_B1|SINE|B4	-7742	NM_023734	74116	Mm.30950	NM_023734	ENSMUSG00000024011	Pi16	1200009H11Rik|Cripi|PI-16	peptidase inhibitor 16	protein-coding
common_peak1-15485-25-53--0.893037596818362-1.84891677255723	chr4	108832873	108833780	+	0	NA	intron (NM_133885, intron 2 of 22)	intron (NM_133885, intron 2 of 22)	41551	NM_133885	100273	Mm.366315	NM_133885	ENSMUSG00000028559	Osbpl9	2600011I06Rik|AU015843|Orp-9	oxysterol binding protein-like 9	protein-coding
common_peak2-22779-21-40--0.788062739351848-1.17890083738706	chr14	59440382	59441548	+	0	NA	Intergenic	L1MD3|LINE|L1	320765	NM_026461	67932	Mm.65550	NM_026461	ENSMUSG00000021977	1700129C05Rik	-	RIKEN cDNA 1700129C05 gene	protein-coding
unique_peak1-4430-8-2-1.42025991722641-1.65811743852845	chr2	168158994	168159500	+	0	NA	Intergenic	Intergenic	-64416	NM_001081134	241794	Mm.425102	NM_001081134	ENSMUSG00000074575	Kcng1	AW536275|OTTMUSG00000016048	potassium voltage-gated channel, subfamily G, member 1	protein-coding
common_peak2-21336-23-16-0.634304663258741-0.82304638657543	chr11	75966242	75967017	+	0	NA	intron (NM_026664, intron 4 of 21)	B4A|SINE|B4	26503	NM_026664	68299	Mm.46397	NM_026664	ENSMUSG00000017288	Vps53	2010002A08Rik|2310040I21Rik|3100002B05Rik|Hccs1	vacuolar protein sorting 53 (yeast)	protein-coding
common_peak1-9798-65-13-2.68481101741952-14.3479748339494	chr12	69159256	69159712	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-389226	NR_033146	100316870	Mm.379794	NR_033146		Gm17821	-	DDB1 and CUL4 associated factor 5 pseudogene	pseudo
common_peak2-31673-27-30-0.0373496405083609-0.315041925765932	chr8	126832322	126833288	+	0	NA	intron (NM_139272, intron 3 of 15)	intron (NM_139272, intron 3 of 15)	77511	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
common_peak1-16760-37-11-1.94103057076466-5.31705276927178	chr6	34709289	34710494	+	0	NA	intron (NM_145575, intron 6 of 11)	intron (NM_145575, intron 6 of 11)	-20541	NM_001289657	76223	Mm.150047	NM_178630	ENSMUSG00000038836	Agbl3	2900053G10Rik|4930431N21Rik|6530406M24Rik|CCP3	ATP/GTP binding protein-like 3	protein-coding
unique_peak2-39205-6-7--0.434601889619698-0.97990265578305	chr8	105827447	105827683	+	0	NA	Intergenic	Intergenic	43869	NR_036588	69794	Mm.396139	NR_036588		1600027J07Rik	-	RIKEN cDNA 1600027J07 gene	ncRNA
unique_peak2-35232-9-8-0.0196884049619079-1.03275496310833	chr16	92674381	92674812	+	0	NA	intron (NM_001111022, intron 4 of 6)	intron (NM_001111022, intron 4 of 6)	22978	NM_001111023	12394	Mm.4081	NM_009821	ENSMUSG00000022952	Runx1	AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b	runt related transcription factor 1	protein-coding
common_peak1-17722-14-23--0.685746340363512-0.669502273696327	chr7	80026045	80026784	+	0	NA	Intergenic	Intergenic	220540	NR_046024	625243	Mm.261798	NR_046024		Gm6567	-	predicted gene 6567	ncRNA
common_peak2-25893-60-75-0.106364348176946-0.368824536501612	chr19	45057709	45059357	+	0	NA	TTS (NM_001081225)	TTS (NM_001081225)	507	NR_040294	73894	Mm.491408	NR_040294		4930414N06Rik	-	RIKEN cDNA 4930414N06 gene	ncRNA
unique_peak2-34338-3-8--1.58390809140159-1.39487600375387	chr13	98691337	98691769	+	0	NA	intron (NM_012026, intron 35 of 35)	intron (NM_012026, intron 35 of 35)	284567	NM_012026	110596	Mm.252718	NM_012026	ENSMUSG00000021662	Arhgef28	9230110L08Rik|AI323540|D13Bwg1089e|RIP2|Rgnef|RhoGEF|Rhoip2|p190RhoGEF	Rho guanine nucleotide exchange factor (GEF) 28	protein-coding
unique_peak2-39189-0-8--4.01005593191652-2.05605744720049	chr8	95878598	95878903	+	0	NA	Intergenic	Intergenic	-17642	NM_021456	12623	Mm.22720	NM_021456	ENSMUSG00000057074	Ces1g	Ces-1|Ces1|Ses-1	carboxylesterase 1G	protein-coding
common_peak2-24331-8-10--0.454209200689727-1.078512453669	chr17	3314251	3314583	+	0	NA	Intergenic	CpG	-12156	NM_001122998	24001	Mm.137134	NM_011878	ENSMUSG00000023800	Tiam2	3000002F19Rik|STEF|mKIAA2016	T cell lymphoma invasion and metastasis 2	protein-coding
common_peak1-16413-50-57-0.18295932135138-0.444157274383078	chr5	127616400	127617565	+	0	NA	Intergenic	Intergenic	-33953	NR_045371	75916	Mm.394659	NR_045371		4930572K03Rik	-	RIKEN cDNA 4930572K03 gene	ncRNA
common_peak1-11210-23-21-0.262335885871783-0.416752705545949	chr15	78845058	78846036	+	0	NA	Intergenic	MIRb|SINE|MIR	-4076	NR_045746	100038602	Mm.417074	NR_045746		Gm10865	ENSMUSG00000075558	predicted gene 10865	ncRNA
unique_peak2-35127-14-27--0.908138761699959-1.05601013496724	chr16	29945525	29946680	+	0	NA	Intergenic	CpG	33108	NR_037689	328657	Mm.425982	NM_001033403		Gm1968	-	predicted gene 1968	ncRNA
common_peak2-32079-28-49--0.590897069953262-0.983321682013132	chr9	96363523	96364355	+	0	NA	Intergenic	Intergenic	15075	NM_011279	19823	Mm.28235	NM_011279	ENSMUSG00000051234	Rnf7	Rbx2|SAG	ring finger protein 7	protein-coding
common_peak1-10931-18-12-0.612479433087259-0.739965416525508	chr15	10689791	10690677	+	0	NA	intron (NR_045063, intron 2 of 6)	MER45A|DNA|Tip100	45579	NR_045065	75259	Mm.33928	NR_045063	ENSMUSG00000097058	4930556M19Rik	1700009D01Rik|C130022M03Rik	RIKEN cDNA 4930556M19 gene	ncRNA
common_peak1-14115-12-5-1.06381348436648-1.78669045979184	chr2	128379987	128380644	+	0	NA	Intergenic	Intergenic	-125228	NR_028590	100043424	Mm.297222	NR_028589		Gm14005	OTTMUSG00000015351	predicted gene 14005	ncRNA
unique_peak1-1853-8-2-1.42025991722641-1.65811743852845	chr14	50957286	50957808	+	0	NA	Intergenic	Lx2|LINE|L1	8568	NM_001011754	257909	Mm.482035	NM_001011754	ENSMUSG00000046210	Olfr735	MOR243-1	olfactory receptor 735	protein-coding
common_peak1-15534-33-47--0.253624938195627-0.423463616707761	chr4	118543417	118544497	+	0	NA	Intergenic	Intergenic	2569	NM_001011856	258159	Mm.388910	NM_001011856	ENSMUSG00000073769	Olfr1331	MOR259-3P	olfactory receptor 1331	protein-coding
unique_peak1-697-6-4-0.24347001549294-0.989110657569874	chr10	80440452	80440941	+	0	NA	intron (NM_010319, intron 2 of 3)	IAPEz-int|LTR|ERVK	23414	NM_001038655	14708	Mm.222496	NM_010319	ENSMUSG00000048240	Gng7	AI840417	guanine nucleotide binding protein (G protein), gamma 7	protein-coding
common_peak2-25452-17-12-0.517856620063946-0.647240723060192	chr19	4162571	4163405	+	0	NA	intron (NM_021485, intron 1 of 14)	intron (NM_021485, intron 1 of 14)	257	NM_021485	58988	Mm.271937	NM_021485	ENSMUSG00000024830	Rps6kb2	70kDa|S6K2	ribosomal protein S6 kinase, polypeptide 2	protein-coding
common_peak2-28494-33-40--0.026214442092555-0.301029995663988	chr4	155992902	155993846	+	0	NA	Intergenic	Intergenic	-384408	NM_198305	231003	Mm.423038	NM_198305	ENSMUSG00000078484	Klhl17	AL022703|BC058738	kelch-like 17	protein-coding
unique_peak1-670-7-2-1.21412832957703-1.45399745587252	chr10	62337526	62337916	+	0	NA	intron (NM_001253857, intron 1 of 11)	B2_Mm2|SINE|B2	5041	NM_027384	52463	Mm.17774	NM_027384	ENSMUSG00000047146	Tet1	2510010B09Rik|AA517754|BB001228|Cxxc6|D10Ertd17e|LCX|mKIAA1676	tet methylcytosine dioxygenase 1	protein-coding
common_peak1-8947-41-34-0.571865687903694-1.12519986426579	chr11	54059814	54061397	+	0	NA	TTS (NM_009969)	TTS (NM_009969)	2796	NM_009969	12981	Mm.4922	NM_009969		Csf2	Csfgm|GMCSF|Gm-CSf|MGI-IGM	colony stimulating factor 2 (granulocyte-macrophage)	protein-coding
common_peak1-9206-10-8-0.186490343566457-1.078512453669	chr11	81914274	81914767	+	0	NA	promoter-TSS (NM_011331)	promoter-TSS (NM_011331)	-827	NM_011331	20293	Mm.867	NM_011331	ENSMUSG00000035352	Ccl12	MCP-5|Scya12	chemokine (C-C motif) ligand 12	protein-coding
common_peak2-28917-35-53--0.323517243700964-0.527635886371667	chr5	92744787	92745967	+	0	NA	Intergenic	Intergenic	-6327	NM_172713	231452	Mm.86564	NM_172713	ENSMUSG00000029415	Sdad1	4931421J16|AA591032|AW538460	SDA1 domain containing 1	protein-coding
unique_peak2-33838-7-13--1.00826409175941-0.697979855752659	chr12	11265671	11266185	+	0	NA	intron (NM_177331, intron 3 of 13)	intron (NM_177331, intron 3 of 13)	6665	NM_177331	209334	Mm.215295	NM_177331	ENSMUSG00000051235	Gen1	5830483C08Rik	Gen homolog 1, endonuclease (Drosophila)	protein-coding
common_peak2-30099-7-5-0.214128329577033-1.01466476204226	chr6	135048898	135049430	+	0	NA	Intergenic	Intergenic	19137	NM_053118	93746	Mm.49902	NM_053118	ENSMUSG00000030205	Gprc5d	-	G protein-coupled receptor, family C, group 5, member D	protein-coding
unique_peak1-4126-11-3-1.50869358425161-1.95434855131066	chr2	90549353	90549877	+	0	NA	intron (NM_021512, intron 21 of 36)	B1_Mur1|SINE|Alu	32243	NM_021512	59015	Mm.24532	NM_021512	ENSMUSG00000051329	Nup160	160kDa|2810011M03Rik|AA414952|AU020188|Gtl-13|Gtl1-13|Gtl13|mKIAA0197	nucleoporin 160	protein-coding
common_peak1-18774-13-7-0.778472030637769-0.817533494790411	chr8	126867044	126867637	+	0	NA	exon (NM_139272, exon 16 of 16)	exon (NM_139272, exon 16 of 16)	90496	NM_171824	209966	Mm.234233	NM_171824	ENSMUSG00000050751	Pgbd5	2900019M05Rik|AI854313	piggyBac transposable element derived 5	protein-coding
common_peak2-21313-13-32--1.26592208872068-1.87214134458702	chr11	74832424	74833120	+	0	NA	intron (NM_001002764, intron 10 of 18)	intron (NM_001002764, intron 10 of 18)	46721	NR_030454	735274		NR_030454		Mir684-1	Mirn684-1	microRNA 684-1	ncRNA
common_peak1-10201-30-23-0.584712908770717-0.92816130897933	chr13	46735674	46736799	+	0	NA	intron (NM_026056, intron 11 of 12)	intron (NM_026056, intron 11 of 12)	-28655	NM_001033192	97863	Mm.275934	NM_001033192	ENSMUSG00000069237	C78339	-	expressed sequence C78339	protein-coding
common_peak1-15397-18-28--0.54506184389922-0.591915184368642	chr4	82504089	82505010	+	0	NA	intron (NM_026647, intron 1 of 8)	intron (NM_026647, intron 1 of 8)	1016	NM_026647	68268	Mm.32047	NM_026647	ENSMUSG00000028403	Zdhhc21	9130404H11Rik|AL024349|D130004H04Rik|dep	zinc finger, DHHC domain containing 21	protein-coding
common_peak2-29671-48-37-0.722999637791229-1.78594796811656	chr6	72293689	72294683	+	0	NA	intron (NM_138592, intron 1 of 12)	LTR40b|LTR|ERVL	983	NM_138592	28035	Mm.281900	NM_138592	ENSMUSG00000056305	Usp39	AA408960|AI894154|CGI-21|D6Wsu157e|SAD1	ubiquitin specific peptidase 39	protein-coding
common_peak2-20196-11-8-0.338768582809301-1.14218153353838	chr1	173943255	173943675	+	0	NA	5' UTR (NM_033509, exon 2 of 8)	5' UTR (NM_033509, exon 2 of 8)	13934	NM_033509	93840	Mm.36148	NM_033509	ENSMUSG00000026556	Vangl2	C530001F03Rik|Lp|Lpp1|Ltap|Vang1l2|loop-tail|ska17|ska<m17Jus>|stbm|strabismus	vang-like 2 (van gogh, Drosophila)	protein-coding
common_peak2-22624-12-20--0.743541437691122-0.625923329873571	chr13	80962764	80963547	+	0	NA	Intergenic	RMER17C|LTR|ERVK	-59528	NM_001042591	105171	Mm.423137	NM_001042591	ENSMUSG00000074794	Arrdc3	AI450344|mKIAA1376	arrestin domain containing 3	protein-coding
common_peak1-19171-22-13-0.8399291830298-1.1381569562463	chr9	96649930	96650909	+	0	NA	intron (NR_015511, intron 2 of 3)	intron (NR_015511, intron 2 of 3)	2831	NR_015511	319859	Mm.259909	NM_177020		E030011O05Rik	-	RIKEN cDNA E030011O05 gene	ncRNA
common_peak2-20440-20-30--0.466121525795682-0.569352520859861	chr10	34417957	34418595	+	0	NA	Intergenic	Intergenic	215070	NM_010237	14302	Mm.332432	NM_010237	ENSMUSG00000019779	Frk	BSK|BSK/IYK|C85044|GTK|RAK	fyn-related kinase	protein-coding
common_peak1-16034-10-12--0.344024373132323-0.340565874754526	chr5	36483554	36484159	+	0	NA	intron (NM_030889, intron 3 of 26)	(GGGAGA)n|Simple_repeat|Simple_repeat	-62814	NM_175249	76943	Mm.44242	NM_175249	ENSMUSG00000043430	Psapl1	2310020A21Rik	prosaposin-like 1	protein-coding
unique_peak1-3566-9-4-0.867685311516858-1.36011389749466	chr19	27336473	27336977	+	0	NA	Intergenic	Intergenic	45215	NM_001161420	22359	Mm.4141	NM_013703	ENSMUSG00000024924	Vldlr	AA408956|AI451093|AW047288	very low density lipoprotein receptor	protein-coding
common_peak1-17272-17-8-1.04837133676273-1.30305656033811	chr6	135028905	135029736	+	0	NA	exon (NM_181444, exon 2 of 4)	exon (NM_181444, exon 2 of 4)	13640	NM_181444	232431	Mm.23575	NM_181444	ENSMUSG00000046733	Gprc5a	Rai3|Raig1	G protein-coupled receptor, family C, group 5, member A	protein-coding
common_peak1-9357-10-7-0.356415345008769-1.12966497611638	chr11	97436202	97436724	+	0	NA	promoter-TSS (NM_018873)	promoter-TSS (NM_018873)	-23	NM_018873	56013	Mm.342665	NM_018873	ENSMUSG00000038453	Srcin1	P140|SNIP|mKIAA1684|p140Cap	SRC kinase signaling inhibitor 1	protein-coding
unique_peak2-37763-6-6--0.241956811677302-0.947717972411649	chr5	115012571	115012965	+	0	NA	Intergenic	RMER17B|LTR|ERVK	-5492	NM_001004180	433940	Mm.194212	NM_001004180	ENSMUSG00000041930	Fam222a	-	family with sequence similarity 222, member A	protein-coding
common_peak1-9983-79-88-0.353101736210222-1.02974069314283	chr13	23737982	23740677	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	-24902	NM_015787	50709	Mm.170587	NM_015787		Hist1h1e	H1-4|H1e|H1f4|H1s-4|H1var2	histone cluster 1, H1e	protein-coding
unique_peak1-2699-15-7-1.01216475055566-1.08658567012551	chr16	87443931	87444624	+	0	NA	Intergenic	ORR1B1|LTR|MaLR	-3440	NM_016924	53858	Mm.162406	NM_016924	ENSMUSG00000041079	Rwdd2b	ORF5	RWD domain containing 2B	protein-coding
common_peak1-17088-8-9--0.316705676939792-1.03275496310833	chr6	112210957	112211290	+	0	NA	Intergenic	Intergenic	-12629	NM_144799	30937	Mm.234441	NM_144799	ENSMUSG00000057604	Lmcd1	AW455500|AW553074|dyxin	LIM and cysteine-rich domains 1	protein-coding
unique_peak2-37517-2-6--1.72480917832092-1.26211192963361	chr5	20955591	20956037	+	0	NA	intron (NM_177869, intron 5 of 7)	Lx5|LINE|L1	25093	NM_177869	330050	Mm.40655	NM_177869	ENSMUSG00000047221	Fam185a	4631428I10|AI847670	family with sequence similarity 185, member A	protein-coding
common_peak2-27355-20-45--1.03548717146582-2.05089002217436	chr3	79567023	79568184	+	0	NA	Intergenic	MusHAL1|LINE|L1	-25887	NM_212452	381489	Mm.331086	NM_212452		Rxfp1	Gm1018|Lgr7	relaxin/insulin-like family peptide receptor 1	protein-coding
common_peak1-17965-13-29--1.12841856497075-1.46151065785802	chr7	130865810	130866610	+	0	NA	Intergenic	MERVK26-int|LTR|ERVK	-222247	NM_001081329	210162	Mm.135397	NM_175435	ENSMUSG00000030757	Zkscan2	9430065N20Rik|AW493225|Zfp694	zinc finger with KRAB and SCAN domains 2	protein-coding
common_peak2-24346-11-11--0.0762689164695427-0.301029995663976	chr17	5806101	5806609	+	0	NA	Intergenic	Intergenic	6865	NR_045080	78512	Mm.23696	NR_045079	ENSMUSG00000096965	3300005D01Rik	-	RIKEN cDNA 3300005D01 gene	ncRNA
common_peak2-30933-22-35--0.522640896354908-0.664636481544818	chr7	145221524	145223068	+	0	NA	Intergenic	Intergenic	367117	NM_183289	70571	Mm.334297	NM_183289	ENSMUSG00000091002	Tcerg1l	5730476P14Rik	transcription elongation regulator 1-like	protein-coding
unique_peak1-5596-7-4-0.477162735410827-1.09384600808989	chr6	34717573	34718031	+	0	NA	intron (NM_145575, intron 10 of 11)	intron (NM_145575, intron 10 of 11)	-12630	NM_001289657	76223	Mm.150047	NM_178630	ENSMUSG00000038836	Agbl3	2900053G10Rik|4930431N21Rik|6530406M24Rik|CCP3	ATP/GTP binding protein-like 3	protein-coding
common_peak2-27745-20-26--0.266812717572275-0.373496418836697	chr3	126921616	126922291	+	0	NA	Intergenic	Intergenic	57730	NR_105029	100862268	Mm.444603	NR_105029	ENSMUSG00000097456	LOC100862268	-	uncharacterized LOC100862268	ncRNA
unique_peak2-39987-6-7--0.434601889619698-0.97990265578305	chrX	159256553	159257098	+	0	NA	intron (NM_001290776, intron 1 of 10)	B4A|SINE|B4	10561	NM_001290776	353170	Mm.270186	NM_178935	ENSMUSG00000038344	Txlng	4932441K18Rik|Fiat|Lrp	taxilin gamma	protein-coding
unique_peak1-5631-17-4-1.89636824331768-2.60953805094651	chr6	15183932	15184722	+	0	NA	intron (NM_001286607, intron 2 of 16)	intron (NM_001286607, intron 2 of 16)	48821	NM_001286607	114142	Mm.332919	NM_053242	ENSMUSG00000029563	Foxp2	2810043D05Rik|AI449000|CAG-16|D0Kist7	forkhead box P2	protein-coding
common_peak2-20903-8-8--0.164702583494742-1.00793137938329	chr11	4336572	4336989	+	0	NA	intron (NM_029458, intron 1 of 10)	intron (NM_029458, intron 1 of 10)	4305	NM_029458	75828	Mm.159592	NM_029458	ENSMUSG00000020419	Hormad2	4930529M09Rik	HORMA domain containing 2	protein-coding
common_peak2-28903-32-27-0.471737097162056-0.777451270049544	chr5	91641081	91641962	+	0	NA	Intergenic	Intergenic	70581	NR_040428	100503265	Mm.125059	NR_040428		Gm19619	-	predicted gene, 19619	ncRNA
unique_peak2-37031-2-7--1.91745425626332-1.45399745587252	chr3	129588929	129589338	+	0	NA	intron (NM_183423, intron 1 of 3)	URR1A|DNA|MER1_type	5031	NM_183423	66350	Mm.151951	NM_023196	ENSMUSG00000027999	Pla2g12a	2310004B05Rik|GXII|GXII-1|GXII-1-PLA2|Pla2g12|Rossy|mGXII-1	phospholipase A2, group XIIA	protein-coding
unique_peak2-33605-2-13--2.72480917832092-2.79529063155376	chr11	94341580	94342215	+	0	NA	exon (NM_144827, exon 14 of 16)	exon (NM_144827, exon 14 of 16)	4727	NM_144827	217116	Mm.156123	NM_144827	ENSMUSG00000020867	Spata20	Tisp78	spermatogenesis associated 20	protein-coding
unique_peak1-4132-14-7-0.899216160357645-0.947446088118041	chr2	92009278	92010003	+	0	NA	Intergenic	RSINE1|SINE|B4	-14699	NM_138755	192285	Mm.330408	NM_138755	ENSMUSG00000058318	Phf21a	80kDa|Bhc|Bhc80|D030065N23Rik|PFTF1	PHD finger protein 21A	protein-coding
common_peak1-9724-13-11-0.193509529916613-0.379391706698377	chr12	32820679	32821278	+	0	NA	Intergenic	Intergenic	72225	NM_001146201	30955	Mm.101369	NM_020272	ENSMUSG00000020573	Pik3cg	5830428L06Rik|PI3Kgamma|p110gamma	phosphoinositide-3-kinase, catalytic, gamma polypeptide	protein-coding
common_peak1-12366-29-13-1.30493515855751-2.5745355257554	chr17	63797963	63799052	+	0	NA	intron (NM_015794, intron 4 of 8)	intron (NM_015794, intron 4 of 8)	51422	NM_015794	50758	Mm.136366	NM_015794		Fbxl17	6330576B01Rik|AI452053|BB073797|C130023C01Rik|Fbx13|Fbxo13	F-box and leucine-rich repeat protein 17	protein-coding
unique_peak2-33848-3-6--1.22133801201688-1.08602067057793	chr12	17000289	17000714	+	0	NA	intron (NM_172574, intron 4 of 6)	RSINE1|SINE|B4	6423	NM_172574	217430	Mm.379451	NM_172574	ENSMUSG00000045679	Pqlc3	C78076|E030024M05Rik	PQ loop repeat containing	protein-coding
common_peak1-16455-27-37--0.256381562548349-0.379775532323854	chr5	135962697	135963715	+	0	NA	intron (NM_146001, intron 1 of 30)	RSINE1|SINE|B4	57786	NM_146001	215114	Mm.280805	NM_146001	ENSMUSG00000039959	Hip1	2610109B09Rik|A930014B11Rik|E130315I21Rik|mKIAA4113	huntingtin interacting protein 1	protein-coding
common_peak1-8581-10-7-0.356415345008769-1.12966497611638	chr10	99237192	99237632	+	0	NA	Intergenic	Intergenic	-15120	NM_027945	71832	Mm.483162	NM_027945	ENSMUSG00000046934	Csl	1700007H16Rik	citrate synthase like	protein-coding
common_peak1-10258-19-47--1.18227517405947-2.51566814918164	chr13	55444382	55445260	+	0	NA	TTS (NM_025828)	TTS (NM_025828)	-13730	NM_016662	17121	Mm.20350	NM_016662	ENSMUSG00000021485	Mxd3	4631412E13Rik|Mad3|bHLHc13	Max dimerization protein 3	protein-coding
unique_peak1-2030-8-2-1.42025991722641-1.65811743852845	chr15	12363923	12364341	+	0	NA	intron (NM_001081064, intron 5 of 23)	intron (NM_001081064, intron 5 of 23)	112881	NM_025673	66629	Mm.157655	NM_025673	ENSMUSG00000022200	Golph3	4733401N08Rik|5730410D03Rik|AW413496	golgi phosphoprotein 3	protein-coding
unique_peak2-38248-3-9--1.73591118484664-1.57096726280955	chr6	124512525	124513085	+	0	NA	Intergenic	Intergenic	-7643	NM_001113356	667277	Mm.481484	NM_001113356	ENSMUSG00000098470	C1rb	Gm8551|mC1rB	complement component 1, r subcomponent B	protein-coding
common_peak1-12236-38-61--0.382743651088345-0.638510577194958	chr17	35163932	35165199	+	0	NA	TTS (NM_013600)	TTS (NM_013600)	396	NR_028258	78376	Mm.390966	NM_023893	ENSMUSG00000036185	Sapcd1	2810436B06Rik|G7d|Ng23	suppressor APC domain containing 1	protein-coding
common_peak2-25597-33-26-0.576450060362061-0.950816664083185	chr19	8770595	8771641	+	0	NA	Intergenic	Intergenic	17269	NM_008577	17254	Mm.4114	NM_008577	ENSMUSG00000010095	Slc3a2	4F2|4F2HC|AI314110|Cd98|Ly-10|Ly-m10|Ly10|Mdu1|Mgp-2hc|NACAE	solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2	protein-coding
common_peak1-10305-21-9-1.24756117037887-1.83731222263754	chr13	65278655	65279473	+	0	NA	intron (NM_175290, intron 9 of 9)	B3A|SINE|B2	25530	NM_146819	258816	Mm.377705	NM_146819	ENSMUSG00000049806	Olfr466	MOR209-1	olfactory receptor 466	protein-coding
unique_peak2-35610-9-10--0.269818212233077-1.05503135781948	chr17	84105447	84105895	+	0	NA	intron (NM_001171053, intron 1 of 13)	CpG	168	NM_001171052	116871	Mm.277668	NM_054082	ENSMUSG00000055817	Mta3	1110002J22Rik|mKIAA1266	metastasis associated 3	protein-coding
unique_peak1-5297-8-1-2.00522241794757-2.05605744720049	chr5	73477049	73477287	+	0	NA	intron (NM_028194, intron 32 of 62)	intron (NM_028194, intron 32 of 62)	79025	NM_173403	231290	Mm.491387	NM_173403		Slc10a4	E130304D01	solute carrier family 10 (sodium/bile acid cotransporter family), member 4	protein-coding
common_peak2-25021-11-13--0.298661337805991-0.337263207250336	chr18	24102257	24102900	+	0	NA	Intergenic	Intergenic	-10611	NM_027007	69256	Mm.218343	NM_027007	ENSMUSG00000024276	Zfp397	2810411K16Rik|6720480F11Rik|AI461664	zinc finger protein 397	protein-coding
common_peak1-18305-11-5-0.923731083530457-1.477227296591	chr8	46216902	46217456	+	0	NA	Intergenic	Intergenic	33320	NR_040690	622523	Mm.390032	NR_040690		Gm6329	EG622523	predicted gene 6329	ncRNA
common_peak2-25302-85-155--0.329998970737598-1.05052824909346	chr18	73702848	73704322	+	0	NA	Intergenic	Lx8|LINE|L1	-28774	NM_001039214	240396	Mm.24131	NM_001039214	ENSMUSG00000037253	Mex3c	A130001D14Rik|BC035207|BM-013|Rkhd2	mex3 homolog C (C. elegans)	protein-coding
common_peak2-26113-9-15--0.81038659359578-0.630231561310125	chr2	5067677	5068121	+	0	NA	intron (NM_028804, intron 2 of 2)	B4|SINE|B4	9077	NM_028804	74186	Mm.274715	NM_028804	ENSMUSG00000026676	Ccdc3	2310045O21Rik	coiled-coil domain containing 3	protein-coding
unique_peak1-1869-10-1-2.35641534500877-2.57096726280955	chr14	56042317	56042938	+	0	NA	Intergenic	MTD|LTR|MaLR	-54968	NM_001037938	28200	Mm.27427	NM_030686	ENSMUSG00000022210	Dhrs4	AI043103|AI790593|CR|D14Ucla2|NDRD|PHCR|PSCD|RRD|mouNRDR	dehydrogenase/reductase (SDR family) member 4	protein-coding
common_peak2-26962-124-112-0.789701356973493-5.23492514776138	chr2	165883686	165886104	+	0	NA	exon (NM_008679, exon 15 of 23)	exon (NM_008679, exon 15 of 23)	66758	NM_008679	17979	Mm.469663	NM_008679	ENSMUSG00000027678	Ncoa3	2010305B15Rik|AW321064|Actr|Aib1|KAT13B|Rac3|Src3|Tram-1|Tram1|bHLHe42|p/Cip|pCip	nuclear receptor coactivator 3	protein-coding
unique_peak1-3783-12-1-2.64877598508764-3.36932189928148	chr19	55837970	55838521	+	0	NA	intron (NM_001142920, intron 4 of 11)	MER20|DNA|MER1_type	21945	NM_001142923	21416	Mm.139815	NM_009333	ENSMUSG00000024985	Tcf7l2	TCF4B|TCF4E|Tcf-4|Tcf4|mTcf-4B|mTcf-4E	transcription factor 7 like 2, T cell specific, HMG box	protein-coding
unique_peak1-3499-7-0-2.79909083029819-2.40823996531185	chr19	14668775	14669126	+	0	NA	intron (NM_011600, intron 3 of 19)	intron (NM_011600, intron 3 of 19)	3523	NM_011600	21888	Mm.103638	NM_011600	ENSMUSG00000024642	Tle4	5730411M05Rik|AA792082|Bce-1|Bce1|ESTM13|ESTM14|Grg4|X83332|X83333	transducin-like enhancer of split 4, homolog of Drosophila E(spl)	protein-coding
common_peak2-31822-27-15-0.991545950895236-1.66700866096458	chr9	43325529	43326368	+	0	NA	Intergenic	Intergenic	207102	NM_023655	72169	Mm.273277	NM_023655	ENSMUSG00000032013	Trim29	1110047J21Rik|2810431N19Rik|4732461M22Rik|AI119726	tripartite motif-containing 29	protein-coding
unique_peak1-4124-13-5-1.19350952991661-1.95509489018123	chr2	90474909	90475495	+	0	NA	Intergenic	Intergenic	-42170	NM_021512	59015	Mm.24532	NM_021512	ENSMUSG00000051329	Nup160	160kDa|2810011M03Rik|AA414952|AU020188|Gtl-13|Gtl1-13|Gtl13|mKIAA0197	nucleoporin 160	protein-coding
common_peak2-26904-21-14-0.662598669657717-0.879255460030357	chr2	158624781	158625475	+	0	NA	intron (NM_145742, intron 1 of 20)	intron (NM_145742, intron 1 of 20)	4585	NM_001291144	71715	Mm.315652	NM_145742	ENSMUSG00000027655	Dhx35	1200009D07Rik|Ddx35	DEAH (Asp-Glu-Ala-His) box polypeptide 35	protein-coding
unique_peak2-38230-2-7--1.91745425626332-1.45399745587252	chr6	115991752	115992317	+	0	NA	intron (NM_177412, intron 4 of 5)	intron (NM_177412, intron 4 of 5)	-47011	NM_026376	67784	Mm.3085	NM_026376	ENSMUSG00000030123	Plxnd1	6230425C21Rik|b2b1863Clo|b2b553Clo	plexin D1	protein-coding
common_peak1-16017-33-13-1.52398264046792-3.43266191012053	chr5	35720134	35721105	+	0	NA	Intergenic	Intergenic	-11147	NM_010445	15371	Mm.358606	NM_010445	ENSMUSG00000067438	Hmx1	Nkx5-3	H6 homeobox 1	protein-coding
common_peak2-22803-83-97-0.299512780990918-0.875941476724261	chr14	12283726	12285073	+	0	NA	Intergenic	RLTR26|LTR|ERVK	-101668	NM_008981	19270	Mm.431266	NM_008981	ENSMUSG00000021745	Ptprg	5430405N12Rik|AW046354|AW549872|RPTPgamma	protein tyrosine phosphatase, receptor type, G	protein-coding
unique_peak2-35460-9-15--0.81038659359578-0.630231561310125	chr17	36951167	36951802	+	0	NA	intron (NM_201611, intron 5 of 5)	intron (NM_201611, intron 5 of 5)	2364	NM_201611	399549	Mm.329034	NM_201611	ENSMUSG00000037130	H2-M10.6	-	histocompatibility 2, M region locus 10.6	protein-coding
common_peak1-15475-11-11--0.0762689164695427-0.301029995663976	chr4	107803953	107804460	+	0	NA	Intergenic	Intergenic	-13054	NM_011327	20280	Mm.379011	NM_011327	ENSMUSG00000028603	Scp2	AA409774|AA409893|C76618|C79031|NSL-TP|SCP-2|SCP-X|SCPX|ns-LTP	sterol carrier protein 2, liver	protein-coding
common_peak2-26860-59-58-0.442720951510736-1.06587805992858	chr2	155473067	155473988	+	0	NA	intron (NM_019828, intron 9 of 18)	B2_Mm2|SINE|B2	24911	NR_030757	735275		NR_030757		Mir499	Mirn499|mmu-mir-499	microRNA 499	ncRNA
common_peak1-17126-15-7-1.01216475055566-1.08658567012551	chr6	115495346	115496031	+	0	NA	intron (NM_199033, intron 1 of 11)	(CA)n|Simple_repeat|Simple_repeat	966	NM_199033	381802	Mm.291208	NM_199033	ENSMUSG00000042389	Tsen2	AU067695	tRNA splicing endonuclease 2 homolog (S. cerevisiae)	protein-coding
common_peak2-23108-17-16-0.130833496954699-0.356936432242225	chr14	79390068	79390667	+	0	NA	intron (NM_027906, intron 14 of 44)	intron (NM_027906, intron 14 of 44)	141382	NM_173758	219189	Mm.159651	NM_027906	ENSMUSG00000058997	Vwa8	1300010F03Rik|4932416F07Rik|AI957255|Kiaa0564|mKIAA0564	von Willebrand factor A domain containing 8	protein-coding
unique_peak2-32847-6-14--1.34149248522822-1.01572999746118	chr1	193448355	193448969	+	0	NA	Intergenic	Intergenic	49049	NM_178632	77065	Mm.338175	NM_178632	ENSMUSG00000037461	Ints7	5930412E23Rik	integrator complex subunit 7	protein-coding
common_peak1-10495-30-57--0.688305585635699-1.33966217785262	chr14	20478994	20480059	+	0	NA	Intergenic	Intergenic	-57717	NM_001024706	432825	Mm.327147	NM_001024706	ENSMUSG00000095024	Gm5458	EG432825	predicted gene 5458	protein-coding
common_peak1-16059-74-118--0.178931186329336-0.465687833458293	chr5	44226184	44227876	+	0	NA	intron (NM_009763, intron 6 of 8)	IAPLTR1_Mm|LTR|ERVK	16898	NM_009763	12182	Mm.246332	NM_009763	ENSMUSG00000029082	Bst1	114/A10|A530073F09|BP-3|Bp3|Bsta1|CD157|Ly65	bone marrow stromal cell antigen 1	protein-coding
unique_peak2-39337-8-14--0.901668177660948-0.660903317613906	chr9	95813482	95814119	+	0	NA	intron (NM_019864, intron 28 of 46)	intron (NM_019864, intron 28 of 46)	-41379	NM_011916	24127	Mm.291179	NM_011916	ENSMUSG00000032410	Xrn1	Dhm2|exo|mXrn1	5'-3' exoribonuclease 1	protein-coding
unique_peak2-35785-7-12--0.901348887842903-1.31827279259406	chr18	54991322	54991813	+	0	NA	Intergenic	Intergenic	158267	NM_175751	269023	Mm.192984	NM_175751	ENSMUSG00000052713	Zfp608	4932417D18Rik|D430007A19Rik|Znf608	zinc finger protein 608	protein-coding
common_peak1-10876-51-31-1.07492382560257-3.24103844268744	chr15	72809379	72811518	+	0	NA	intron (NM_001164642, intron 8 of 16)	intron (NM_001164642, intron 8 of 16)	75794	NM_029640	76510	Mm.158902	NM_029640	ENSMUSG00000047921	Trappc9	1810044A24Rik|2900005P22Rik|4632408O18Rik|Ibp|Nibp|TRS130|mKIAA1882	trafficking protein particle complex 9	protein-coding
common_peak2-24279-11-23--1.07626891646954-1.24082643394777	chr16	97495679	97496233	+	0	NA	Intergenic	Intergenic	-82379	NM_019517	56175	Mm.97885	NM_019517	ENSMUSG00000040605	Bace2	1110059C24Rik|AEPLC|AI850424|ALP56|ARP1|ASP21|BAE2|CDA13|CEAP1|DRAP	beta-site APP-cleaving enzyme 2	protein-coding
unique_peak2-37496-3-8--1.58390809140159-1.39487600375387	chr5	5692343	5692639	+	0	NA	intron (NM_028734, intron 1 of 5)	intron (NM_028734, intron 1 of 5)	1598	NM_001285471	74051	Mm.274956	NM_028734	ENSMUSG00000015653	Steap2	4921538B17Rik|AI930049|AW045895|IPCA-1|IPCA1|PCANAP1|STAMP1|STMP	six transmembrane epithelial antigen of prostate 2	protein-coding
unique_peak2-33534-9-18--1.05831410703937-0.965105923112245	chr11	77493204	77493967	+	0	NA	Intergenic	MTC|LTR|MaLR	-6056	NM_001024205	68564	Mm.428996	NM_001024205		Nufip2	1110001M19Rik|9530056D24Rik|AI256692|AI461731|PIG1|mKIAA1321	nuclear fragile X mental retardation protein interacting protein 2	protein-coding
unique_peak1-1677-10-2-1.77145284428761-2.09384600808989	chr13	72636135	72636694	+	0	NA	Intergenic	RLTR23|LTR|ERV1	129598	NR_030701	328287	Mm.235072	NR_030701		Gm20554	D430050G20	predicted gene, 20554	ncRNA
unique_peak1-715-12-4-1.32684789020028-2.04196296489515	chr10	89443163	89443880	+	0	NA	intron (NM_001128086, intron 1 of 24)	intron (NM_001128086, intron 1 of 24)	107267	NM_001128086	77531	Mm.440605	NM_181398	ENSMUSG00000058589	Anks1b	AIDA-1b|C030032C09Rik|E530015N03Rik|ENSMUSG00000078431|Gm10937|Gm1555	ankyrin repeat and sterile alpha motif domain containing 1B	protein-coding
common_peak2-25408-69-75-0.347214933815147-0.913749359973624	chr19	38124102	38125595	+	0	NA	Intergenic	Intergenic	-4667	NM_028293	74107	Mm.9916	NM_028293	ENSMUSG00000024989	Cep55	1200008O12Rik|2700032M20Rik	centrosomal protein 55	protein-coding
common_peak1-17467-16-11-0.533301141546906-0.58239619684445	chr7	19665375	19666149	+	0	NA	exon (NM_010058, exon 3 of 5)	exon (NM_010058, exon 3 of 5)	-3436	NM_032418	13400	Mm.6529	NM_032418	ENSMUSG00000030409	Dmpk	DM|DMK|Dm15|MDPK|MT-PK	dystrophia myotonica-protein kinase	protein-coding
common_peak2-26686-13-15--0.221527969362231-0.308519316180257	chr2	125673103	125673778	+	0	NA	intron (NM_001285507, intron 3 of 12)	L2|LINE|L2	11378	NM_009939	12848	Mm.3596	NM_009939	ENSMUSG00000027206	Cops2	AI315723|C85265|Csn2|Sgn2|TRIP-15|Trip15	COP9 (constitutive photomorphogenic) homolog, subunit 2 (Arabidopsis thaliana)	protein-coding
common_peak2-22118-14-18--0.348711353085941-0.360333814299795	chr12	83688223	83688746	+	0	NA	Intergenic	ID_B1|SINE|B4	-29541	NM_015812	50779	Mm.153013	NM_015812	ENSMUSG00000021219	Rgs6	-	regulator of G-protein signaling 6	protein-coding
unique_peak2-34116-6-35--2.60452689106201-5.23041074693955	chr13	21749951	21750800	+	0	NA	exon (NM_146541, exon 1 of 1)	exon (NM_146541, exon 1 of 1)	815	NM_146541	258534	Mm.271446	NM_146541	ENSMUSG00000049737	Olfr1361	MOR256-12	olfactory receptor 1361	protein-coding
unique_peak1-5981-9-2-1.60465090568306-1.87199725847353	chr6	97395209	97395768	+	0	NA	intron (NM_145148, intron 2 of 23)	intron (NM_145148, intron 2 of 23)	172163	NM_145148	232288	Mm.27789	NM_145148	ENSMUSG00000030064	Frmd4b	6030440G05Rik|C87375|GOBLIN|GRSP1|R74720|mKIAA1013	FERM domain containing 4B	protein-coding
common_peak2-30344-14-9-0.577288065470282-0.630231561310125	chr7	25878442	25878883	+	0	NA	exon (NM_001163556, exon 13 of 14)	exon (NM_001163556, exon 13 of 14)	3532	NR_105855	102465968		NR_105855		Mir6537	mmu-mir-6537	microRNA mir-6537	ncRNA
unique_peak1-2593-10-1-2.35641534500877-2.57096726280955	chr16	31639802	31640304	+	0	NA	Intergenic	MIRc|SINE|MIR	-23476	NM_001252435	13383	Mm.382	NM_007862	ENSMUSG00000022770	Dlg1	B130052P05Rik|Dlgh1|E-dlg/SAP97|SAP-97|SAP97|mKIAA4187	discs, large homolog 1 (Drosophila)	protein-coding
unique_peak1-6835-15-4-1.69023665566829-1.97518968347063	chr8	80855890	80856678	+	0	NA	intron (NM_183096, intron 11 of 13)	B4A|SINE|B4	104267	NM_138944	18997	Mm.234261	NM_138944	ENSMUSG00000031688	Pou4f2	Brn-3.2|Brn-3b|Brn3b|Pou4f-rs1|mBrn3-3R	POU domain, class 4, transcription factor 2	protein-coding
unique_peak2-38850-4-8--1.19338551529556-1.21878474469819	chr7	144340858	144341381	+	0	NA	Intergenic	Intergenic	-85247	NR_045885	100038555	Mm.444788	NR_045885		Gm10578	ENSMUSG00000073800	predicted gene 10578	ncRNA
unique_peak1-5420-9-2-1.60465090568306-1.87199725847353	chr5	112294487	112294933	+	0	NA	Intergenic	GA-rich|Low_complexity|Low_complexity	-103962	NR_045833	269683	Mm.136946	NM_207252	ENSMUSG00000085271	E130006D01Rik	Gm16018|Gm681|OTTMUSG00000029083	RIKEN cDNA E130006D01 gene	ncRNA
common_peak1-8896-27-33--0.0959168903551033-0.304370854244436	chr11	49051044	49051987	+	0	NA	Intergenic	Intergenic	-6178	NM_010794	17308	Mm.196933	NM_010794	ENSMUSG00000020346	Mgat1	Mgat-1	mannoside acetylglucosaminyltransferase 1	protein-coding
common_peak2-32083-18-11-0.727956650507195-0.876666802405043	chr9	96650121	96650632	+	0	NA	intron (NR_015511, intron 2 of 3)	intron (NR_015511, intron 2 of 3)	2874	NR_015511	319859	Mm.259909	NM_177020		E030011O05Rik	-	RIKEN cDNA E030011O05 gene	ncRNA
common_peak1-18189-66-52-0.790563209862643-2.74580449436195	chr8	20288314	20289608	+	0	NA	Intergenic	Intergenic	-268569	NR_028428	381598	Mm.359054	NM_001024708	ENSMUSG00000071793	2610005L07Rik	2810038F24Rik|6720476A01Rik	cadherin 11 pseudogene	pseudo
common_peak2-31084-5-4--0.0263084308932156-0.909929411522249	chr8	25012334	25012754	+	0	NA	exon (NM_001277239, exon 5 of 8)	exon (NM_001277239, exon 5 of 8)	232411	NM_177086	320158	Mm.121274	NM_177086	ENSMUSG00000037492	Zmat4	9630048M01Rik	zinc finger, matrin type 4	protein-coding
common_peak2-30781-9-8-0.0196884049619079-1.03275496310833	chr7	126625584	126626035	+	0	NA	Intergenic	Intergenic	-3033	NM_001278605	22242	Mm.10826	NM_009470	ENSMUSG00000030963	Umod	THP|Urehd1|urehr4	uromodulin	protein-coding
unique_peak2-34088-4-6--0.830815435910851-0.989110657569874	chr13	11566011	11566384	+	0	NA	Intergenic	Intergenic	-48122	NR_027813	664793	Mm.410565	NR_027813		Zp4-ps	EG664793|Zp4|Zpb	zona pellucida glycoprotein 4, pseudogene	pseudo
common_peak2-26005-40-54--0.122384030773562-0.319645149473555	chr19	55740671	55741821	+	0	NA	intron (NR_045318, intron 2 of 3)	MTE2a|LTR|MaLR	35448	NR_045318	77594	Mm.329924	NR_045318	ENSMUSG00000097632	4930552P12Rik	-	RIKEN cDNA 4930552P12 gene	ncRNA
unique_peak1-5111-9-2-1.60465090568306-1.87199725847353	chr4	155484990	155485513	+	0	NA	intron (NM_177205, intron 1 of 9)	MT2B2|LTR|ERVL	1144	NM_177205	230996	Mm.318925	NM_145557	ENSMUSG00000059939	9430015G10Rik	-	RIKEN cDNA 9430015G10 gene	protein-coding
unique_peak1-5738-9-0-3.18961340640422-3.01029995663981	chr6	43675484	43675880	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-59508	NM_013861	29807	Mm.320979	NM_013861	ENSMUSG00000029735	Tpk1	-	thiamine pyrophosphokinase	protein-coding
unique_peak1-6755-11-4-1.18676548936425-1.68134727924692	chr8	56070473	56070945	+	0	NA	intron (NM_001253756, intron 1 of 5)	Lx8|LINE|L1	30628	NM_001253756	234267	Mm.241700	NM_153581	ENSMUSG00000031517	Gpm6a	Gpm6|M6A	glycoprotein m6a	protein-coding
common_peak2-28475-11-11--0.0762689164695427-0.301029995663976	chr4	155222178	155222770	+	0	NA	intron (NM_010091, intron 1 of 14)	intron (NM_010091, intron 1 of 14)	953	NM_010091	13542	Mm.3400	NM_010091	ENSMUSG00000029071	Dvl1	Dvl|mKIAA4029	dishevelled, dsh homolog 1 (Drosophila)	protein-coding
unique_peak2-34518-3-6--1.22133801201688-1.08602067057793	chr14	52278885	52279309	+	0	NA	intron (NM_001013816, intron 4 of 4)	intron (NM_001013816, intron 4 of 4)	57710	NM_001034102	545047	Mm.425915	NM_001034102	ENSMUSG00000068506	Gm5800	EG545047	predicted gene 5800	protein-coding
common_peak1-14283-28-15-1.05295911982146-1.80321929531239	chr2	157394831	157395875	+	0	NA	Intergenic	RLTR12B|LTR|ERVK	-3256	NM_016916	53619	Mm.480461	NM_016916	ENSMUSG00000067787	Blcap	AI462828|Bc10	bladder cancer associated protein homolog (human)	protein-coding
common_peak1-13652-10-8-0.186490343566457-1.078512453669	chr2	26445866	26446451	+	0	NA	promoter-TSS (NR_029541)	promoter-TSS (NR_029541)	-719	NR_029541	387145		NR_029541		Mir126a	Mir126|Mirn126|mmu-mir-126|mmu-mir-126a	microRNA 126a	ncRNA
common_peak2-20161-10-5-0.771452844287613-1.33892459842472	chr1	170852712	170853139	+	0	NA	Intergenic	Intergenic	432151	NR_105766	102465178		NR_105766	miRBase:MI0021876	Mir6348	mmu-mir-6348	microRNA mir-6348	ncRNA
common_peak1-18337-22-13-0.8399291830298-1.1381569562463	chr8	64523058	64523969	+	0	NA	Intergenic	L1Md_F2|LINE|L1	78477	NM_001136089	26359	Mm.42179	NM_011922	ENSMUSG00000031635	Anxa10	-	annexin A10	protein-coding
unique_peak2-32453-1-6--2.43441193227435-1.56314192529759	chr1	10039807	10040123	+	0	NA	intron (NM_026493, intron 3 of 29)	intron (NM_026493, intron 3 of 29)	11666	NM_026493	211660	Mm.244046	NM_026493	ENSMUSG00000056763	Cspp1	2310020J12Rik|4930413O22Rik|AA387550|BC055915|Cspp2|Cspp3	centrosome and spindle pole associated protein 1	protein-coding
unique_peak1-3793-12-7-0.648775985087639-0.697979855752659	chr19	57118703	57119342	+	0	NA	intron (NM_001290813, intron 15 of 20)	intron (NM_001290813, intron 15 of 20)	-35957	NM_001177797	226250	Mm.226284	NM_146102	ENSMUSG00000025083	Afap1l2	AU041783|C86904|mKIAA1914	actin filament associated protein 1-like 2	protein-coding
unique_peak1-1789-15-1-3.01216475055566-4.18809100057339	chr14	20884890	20885647	+	0	NA	Intergenic	Intergenic	17126	NM_026209	67509	Mm.292423	NM_026209	ENSMUSG00000045107	Saysd1	1810063B07Rik|4930488P03Rik	SAYSVFN motif domain containing 1	protein-coding
common_peak2-32337-13-20--0.613845392140992-0.532159081577619	chrX	74392261	74393254	+	0	NA	Intergenic	Intergenic	-363809	NM_020601	21372	Mm.258476	NM_020601	ENSMUSG00000025246	Tbl1x	5330429M20|Tbl1	transducin (beta)-like 1 X-linked	protein-coding
common_peak1-10925-94-141--0.020157551655366-0.301802763277132	chr15	8443267	8444641	+	0	NA	Intergenic	Lx5|LINE|L1	-49491	NM_201232	71175	Mm.240329	NM_027707	ENSMUSG00000022141	Nipbl	Idn3	Nipped-B homolog (Drosophila)	protein-coding
common_peak2-24242-56-112--0.584583136975945-1.90127205594093	chr16	90829911	90832060	+	0	NA	promoter-TSS (NM_027627)	promoter-TSS (NM_027627)	-119	NM_027627	70967	Mm.253077	NM_027627		Eva1c	1700092M14Rik|4931408A02Rik|Fam176c	eva-1 homolog C (C. elegans)	protein-coding
common_peak2-24138-12-15--0.351224014912361-0.332077462497413	chr16	36693823	36694444	+	0	NA	promoter-TSS (NM_134109)	promoter-TSS (NM_134109)	69	NM_001285791	106347	Mm.17807	NM_134109	ENSMUSG00000022900	Ildr1	AU041483|AU044638	immunoglobulin-like domain containing receptor 1	protein-coding
common_peak2-32235-53-65-0.0965788930574751-0.358528808455797	chr9	123924387	123925644	+	0	NA	Intergenic	MTB|LTR|MaLR	-11688	NM_009914	12771	Mm.57050	NM_009914	ENSMUSG00000035448	Ccr3	CC-CKR3|CKR3|Cmkbr1l2|Cmkbr3	chemokine (C-C motif) receptor 3	protein-coding
common_peak2-20321-10-6-0.549060422951165-1.21398586181642	chr10	80265089	80265507	+	0	NA	intron (NM_013651, intron 4 of 8)	intron (NM_013651, intron 4 of 8)	-2695	NM_007445	11705	Mm.376094	NM_007445	ENSMUSG00000035262	Amh	MIS	anti-Mullerian hormone	protein-coding
unique_peak1-5103-13-1-2.77847203063777-3.64038867156802	chr4	150788970	150789698	+	0	NA	intron (NM_001081557, intron 5 of 23)	intron (NM_001081557, intron 5 of 23)	-357272	NM_009498	22319	Mm.273930	NM_009498	ENSMUSG00000028955	Vamp3	D130027G05Rik|VAMP-3|ceb	vesicle-associated membrane protein 3	protein-coding
common_peak2-30925-43-55--0.024791736533901-0.301029995663988	chr7	144964012	144965492	+	0	NA	Intergenic	Intergenic	335395	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
unique_peak1-3765-38-11-1.98649015857737-5.73642998372103	chr19	55215921	55217708	+	0	NA	Intergenic	RMER15|LTR|ERVL	-38561	NM_009348	21684	Mm.42139	NM_009348	ENSMUSG00000024979	Tectb	Tctnb	tectorin beta	protein-coding
unique_peak2-34042-3-16--2.50144593120962-3.03427613622886	chr12	112794797	112795472	+	0	NA	Intergenic	B1_Mur4|SINE|Alu	15977	NR_033168	100316932	Mm.484709	NR_033168		Snora28	MBI-13	small nucleolar RNA, H/ACA box 28	snoRNA
common_peak2-20872-13-20--0.613845392140992-0.532159081577619	chr11	101416924	101417912	+	0	NA	intron (NM_001252222, intron 3 of 22)	intron (NM_001252222, intron 3 of 22)	3450	NM_001252223	17966	Mm.784	NM_008676	ENSMUSG00000017119	Nbr1	mKIAA0049	neighbor of Brca1 gene 1	protein-coding
common_peak1-14502-129-236--0.21022292693219-0.774614345537842	chr3	16182737	16184171	+	0	NA	Intergenic	Lx5|LINE|L1	100271	NM_001145919	229096	Mm.23834	NM_172677	ENSMUSG00000047213	Ythdf3	9130022A11Rik	YTH domain family 3	protein-coding
common_peak1-15117-14-12-0.198776442216552-0.373562084705529	chr3	137864643	137865367	+	0	NA	Intergenic	L1Md_A|LINE|L1	-15328	NM_001163386	67741	Mm.383221	NM_001163385	ENSMUSG00000012042	4930579F01Rik	-	RIKEN cDNA 4930579F01 gene	protein-coding
unique_peak1-2357-10-5-0.771452844287613-1.33892459842472	chr15	86087738	86088217	+	0	NA	intron (NM_145476, intron 4 of 12)	intron (NM_145476, intron 4 of 12)	43088	NM_145476	223754	Mm.28904	NM_145476	ENSMUSG00000051864	Tbc1d22a	BC023106|D15Ertd781e	TBC1 domain family, member 22a	protein-coding
common_peak1-11898-75-120--0.17979624553131-0.462783166581151	chr17	6781764	6783928	+	0	NA	Intergenic	RLTR1B-int|LTR|ERV1	-23542	NM_001166627	100040531	Mm.457987	NM_001166627	ENSMUSG00000095677	Dynlt1f	100040631|Dynlt1e	dynein light chain Tctex-type 1F	protein-coding
common_peak1-19115-8-10--0.454209200689727-1.078512453669	chr9	75764862	75765370	+	0	NA	Intergenic	MT2A|LTR|ERVL	-97668	NM_173731	208982	Mm.82306	NM_173731	ENSMUSG00000007908	Hmgcll1	BC037381	3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1	protein-coding
unique_peak1-3482-11-3-1.50869358425161-1.95434855131066	chr19	10417203	10417795	+	0	NA	Intergenic	Intergenic	-38132	NM_198114	269060	Mm.329718	NM_198114	ENSMUSG00000035735	Dagla	Nsddr	diacylglycerol lipase, alpha	protein-coding
common_peak1-17372-62-58-0.528108409440243-1.41469833047472	chr7	66387500	66389261	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-95740	NM_173010	22215	Mm.9002	NM_011668	ENSMUSG00000025326	Ube3a	4732496B02|5830462N02Rik|A130086L21Rik|Hpve6a|mKIAA4216	ubiquitin protein ligase E3A	protein-coding
common_peak2-29898-18-17-0.142994149786039-0.353907621462753	chr6	113531161	113531738	+	0	NA	exon (NM_001033244, exon 35 of 44)	exon (NM_001033244, exon 35 of 44)	19260	NM_027633	70979	Mm.72959	NM_027633	ENSMUSG00000033963	Fancd2os	4931417G12Rik	Fancd2 opposite strand	protein-coding
common_peak2-20638-9-14--0.717277189204299-0.53895475198017	chr10	80741717	80742263	+	0	NA	exon (NM_013769, exon 11 of 21)	exon (NM_013769, exon 11 of 21)	6536	NM_001282096	27375	Mm.27984	NM_013769	ENSMUSG00000034917	Tjp3	-	tight junction protein 3	protein-coding
unique_peak1-2736-23-11-1.13680500378792-1.66030262873422	chr16	97665588	97666720	+	0	NA	Intergenic	B4|SINE|B4	18358	NM_010846	17857	Mm.33996	NM_010846	ENSMUSG00000000386	Mx1	AI893580|Mx|Mx-1	MX dynamin-like GTPase 1	protein-coding
common_peak1-7614-120-114-0.707471569547375-4.2788206270565	chr1	59998557	60001504	+	0	NA	intron (NM_001037725, intron 1 of 7)	B2_Mm2|SINE|B2	30180	NM_001037725	72750	Mm.258250	NM_001037725	ENSMUSG00000041040	Fam117b	2810425F24Rik|6330416D14Rik|Als2cr13	family with sequence similarity 117, member B	protein-coding
common_peak1-15097-42-50-0.0699039858956887-0.334445504886124	chr3	131364380	131365693	+	0	NA	Intergenic	Intergenic	136040	NM_001289477	23971	Mm.244912	NM_011863	ENSMUSG00000028032	Papss1	AI325286|Asapk|SK1	3'-phosphoadenosine 5'-phosphosulfate synthase 1	protein-coding
unique_peak2-38739-6-7--0.434601889619698-0.97990265578305	chr7	113369639	113370058	+	0	NA	Intergenic	L1Md_T|LINE|L1	-10994	NM_029000	74558	Mm.458429	NM_029000	ENSMUSG00000045868	Gvin1	9130002C22Rik|9830104F22Rik|Iigs1|VLIG|VLIG-1	GTPase, very large interferon inducible 1	protein-coding
common_peak1-16704-9-3-1.18961340640422-1.57096726280955	chr6	22354967	22355524	+	0	NA	Intergenic	Intergenic	-49164	NM_138587	27999	Mm.490307	NM_138587	ENSMUSG00000029672	Fam3c	D6Wsu176e|Ilei	family with sequence similarity 3, member C	protein-coding
common_peak1-13888-52-117--0.774383059096142-3.02153464980357	chr2	75703365	75704627	+	0	NA	intron (NM_172666, intron 8 of 19)	intron (NM_172666, intron 8 of 19)	33762	NM_172666	228061	Mm.31227	NM_172666	ENSMUSG00000042410	Agps	5832437L22|9930035G10Rik|AW123847|Adaps|Adas|Adhaps|Adps|Aldhpsy|bs2	alkylglycerone phosphate synthase	protein-coding
unique_peak1-6900-9-2-1.60465090568306-1.87199725847353	chr8	95852452	95852942	+	0	NA	intron (NM_021456, intron 4 of 13)	RMER17B|LTR|ERVK	8411	NM_021456	12623	Mm.22720	NM_021456	ENSMUSG00000057074	Ces1g	Ces-1|Ces1|Ses-1	carboxylesterase 1G	protein-coding
unique_peak2-33438-4-7--1.02346051385325-1.09384600808989	chr11	61176852	61177323	+	0	NA	intron (NM_026183, intron 6 of 16)	intron (NM_026183, intron 6 of 16)	14490	NM_026183	67473	Mm.100741	NM_026183	ENSMUSG00000010122	Slc47a1	1300013J15Rik|AI036982|MATE1|mMATE1	solute carrier family 47, member 1	protein-coding
common_peak1-14757-9-5-0.604650905683064-1.21398586181642	chr3	88143165	88143632	+	0	NA	intron (NM_178246, intron 1 of 21)	intron (NM_178246, intron 1 of 21)	3216	NM_178246	229512	Mm.439830	NM_173188	ENSMUSG00000001415	Smg5	BC024683|mKIAA1089	Smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans)	protein-coding
common_peak2-24613-11-9-0.186765489364251-0.344532117358383	chr17	33782786	33783197	+	0	NA	TTS (NM_001109913)	TTS (NM_001109913)	7951	NR_028279	378460	Mm.272606	NM_001002842	ENSMUSG00000032739	Pram1	AY665714	PML-RAR alpha-regulated adaptor molecule 1	protein-coding
common_peak2-22181-36-67--0.608141755082585-1.2455458718154	chr12	102877299	102878587	+	0	NA	Intergenic	L1Md_F2|LINE|L1	71840	NM_028924	74413	Mm.275939	NM_028924	ENSMUSG00000021187	Tc2n	4933406D09Rik|Mtac2d1|Tac2-N	tandem C2 domains, nuclear	protein-coding
unique_peak2-39269-2-6--1.72480917832092-1.26211192963361	chr8	120509198	120509609	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	-183574	NM_026758	68533	Mm.181836	NM_026758	ENSMUSG00000031843	Mphosph6	1110001M01Rik|AA536809|C86426	M phase phosphoprotein 6	protein-coding
common_peak1-15558-13-11-0.193509529916613-0.379391706698377	chr4	124703544	124704231	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-3371	NM_145552	230737	Mm.90760	NM_145552	ENSMUSG00000028869	Gnl2	BC003262|HUMAUANTIG|Ngp-1	guanine nucleotide binding protein-like 2 (nucleolar)	protein-coding
unique_peak1-4545-12-7-0.648775985087639-0.697979855752659	chr3	37937639	37938352	+	0	NA	Intergenic	L1Md_F2|LINE|L1	140260	NR_040559	626410	Mm.389417	NR_040559		Gm20755	-	predicted gene, 20755	ncRNA
unique_peak1-7064-11-2-1.92373108353046-2.32232533660526	chr9	13460597	13461157	+	0	NA	intron (NM_001013813, intron 1 of 3)	MTE2a|LTR|MaLR	-6027	NM_173776	270118	Mm.116898	NM_173776	ENSMUSG00000031925	Maml2	5930431H10|BC032967	mastermind like 2 (Drosophila)	protein-coding
common_peak1-17868-52-49-0.464403800490975-1.04068780415874	chr7	114170873	114172287	+	0	NA	Intergenic	Lx3C|LINE|L1	-8070	NM_147034	259036	Mm.377801	NM_147034	ENSMUSG00000073898	Olfr713	MOR263-1|P3	olfactory receptor 713	protein-coding
common_peak2-30435-19-18-0.154759813218101-0.351190433797598	chr7	44816379	44816990	+	0	NA	Intergenic	Intergenic	1703220	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak1-14307-23-14-0.814876908900562-1.09492971584134	chr2	161177431	161178119	+	0	NA	Intergenic	Intergenic	-242983	NM_173368	71389	Mm.122738	NM_173368	ENSMUSG00000057133	Chd6	5430439G14Rik|6330406J24Rik|CHD-6	chromodomain helicase DNA binding protein 6	protein-coding
common_peak2-30086-201-280-0.31541937484733-1.99344540663356	chr6	134791568	134793240	+	0	NA	intron (NM_177687, intron 1 of 4)	B1_Mus1|SINE|Alu	12187	NM_177687	232430	Mm.267010	NM_177687		Crebl2	AI046348|B230205M03	cAMP responsive element binding protein-like 2	protein-coding
unique_peak2-35895-7-5-0.214128329577033-1.01466476204226	chr19	3641453	3641867	+	0	NA	intron (NM_008513, intron 5 of 22)	intron (NM_008513, intron 5 of 22)	44904	NM_008513	16973	Mm.274581	NM_008513	ENSMUSG00000024913	Lrp5	BMND1|HBM|LR3|LRP7|OPPG|mKIAA4142	low density lipoprotein receptor-related protein 5	protein-coding
common_peak2-31511-8-9--0.316705676939792-1.03275496310833	chr8	107503370	107503827	+	0	NA	Intergenic	Lx6|LINE|L1	17980	NM_197999	72361	Mm.26580	NM_197999	ENSMUSG00000031877	Ces2g	2210023G05Rik|Ces2l	carboxylesterase 2G	protein-coding
unique_peak1-2531-16-3-2.11826364226806-2.65002542325363	chr16	21210880	21211707	+	0	NA	intron (NM_010143, intron 1 of 15)	(CGGG)n|Simple_repeat|Simple_repeat	6425	NM_010143	13845	Mm.6972	NM_010143	ENSMUSG00000005958	Ephb3	AW456895|Cek10|Etk2|HEK2|MDK5|Sek4|Tyro6	Eph receptor B3	protein-coding
common_peak2-30362-16-26--0.636623859895407-0.713114929964887	chr7	28371394	28372361	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-4702	NM_001110208	11652	Mm.177194	NM_007434	ENSMUSG00000004056	Akt2	2410016A19Rik|AW554154|PKB|PKBbeta	thymoma viral proto-oncogene 2	protein-coding
unique_peak2-36811-2-8--2.08737925770563-1.65811743852845	chr3	85757347	85757798	+	0	NA	Intergenic	Intergenic	48841	NM_001001650	368202	Mm.253822	NM_001001650	ENSMUSG00000049013	Prss48	Esspl|Gm1019	protease, serine 48	protein-coding
unique_peak2-34070-66-513--2.48714088476804-70.4208641257816	chr13	119595581	119603541	+	0	NA	Intergenic	ORR1E-int|LTR|MaLR	96055	NM_008002	14165	Mm.317323	NM_008002	ENSMUSG00000021732	Fgf10	AEY17|BB213776|Fgf-10|Gsfaey17	fibroblast growth factor 10	protein-coding
unique_peak1-473-5-4--0.0263084308932156-0.909929411522249	chr1	173802101	173802614	+	0	NA	intron (NM_001289470, intron 3 of 8)	Lx9|LINE|L1	32529	NM_013489	12523	Mm.259115	NM_013489	ENSMUSG00000038147	Cd84	A130013D22Rik|CDw84|SLAMF5	CD84 antigen	protein-coding
unique_peak1-5813-8-0-3.00522241794757-2.70926996097583	chr6	69406063	69406518	+	0	NA	Intergenic	L1Md_T|LINE|L1	-129122	NR_004434	19783		NR_004434		Rprl1	Rmrp2|Rpr|Rprh2	ribonuclease P RNA-like 1	ncRNA
common_peak2-25085-54-83--0.219231661149027-0.470687517451348	chr18	36286096	36288202	+	0	NA	intron (NM_001167891, intron 1 of 9)	intron (NM_001167891, intron 1 of 9)	21292	NR_015571	74966	Mm.379238	NM_030089		4930471G03Rik	1700007N01Rik	RIKEN cDNA 4930471G03 gene	ncRNA
unique_peak2-37796-4-26--2.77834801601672-4.21583923654667	chr5	122193339	122194317	+	0	NA	intron (NM_009125, intron 1 of 24)	B3|SINE|B2	32210	NM_009125	20239	Mm.260900	NM_009125	ENSMUSG00000042605	Atxn2	9630045M23Rik|ATX2|AW544490|Sca2	ataxin 2	protein-coding
common_peak1-10695-10-24--1.28744084476596-1.59083646988122	chr14	56033976	56034570	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-63322	NM_001037938	28200	Mm.27427	NM_030686	ENSMUSG00000022210	Dhrs4	AI043103|AI790593|CR|D14Ucla2|NDRD|PHCR|PSCD|RRD|mouNRDR	dehydrogenase/reductase (SDR family) member 4	protein-coding
unique_peak1-5040-19-5-1.81772482594053-2.59995804677862	chr4	133117485	133118515	+	0	NA	Intergenic	Intergenic	8695	NM_011850	23957	Mm.346759	NM_011850	ENSMUSG00000037583	Nr0b2	SHP|SHP-1|Shp1	nuclear receptor subfamily 0, group B, member 2	protein-coding
common_peak1-8522-33-62--0.645942360974388-1.33955643568472	chr10	85916072	85917118	+	0	NA	intron (NM_001164495, intron 2 of 6)	intron (NM_001164495, intron 2 of 6)	45046	NM_001164495	27204	Mm.394931	NM_013722	ENSMUSG00000059602	Syn3	-	synapsin III	protein-coding
unique_peak2-35310-2-6--1.72480917832092-1.26211192963361	chr17	14290618	14291007	+	0	NA	Intergenic	Intergenic	50026	NM_172826	240025	Mm.79993	NM_172826	ENSMUSG00000048826	Dact2	2900084M21Rik|A630024E20|Dpr2|Frd2|dapper2	dapper homolog 2, antagonist of beta-catenin (xenopus)	protein-coding
common_peak2-21626-14-7-0.899216160357645-0.947446088118041	chr11	101059974	101060497	+	0	NA	intron (NM_007970, intron 15 of 20)	B3|SINE|B2	22804	NM_016782	53321	Mm.474527	NM_016782	ENSMUSG00000017167	Cntnap1	AI841080|Caspr|NCP1|Nrxn4|p190|shm	contactin associated protein-like 1	protein-coding
common_peak1-8316-16-7-1.11826364226806-1.23399803405144	chr10	42089684	42090200	+	0	NA	intron (NM_145743, intron 7 of 12)	L1_Rod|LINE|L1	-93394	NM_019740	56484	Mm.338613	NM_019740	ENSMUSG00000048756	Foxo3	1110048B16Rik|2010203A17Rik|C76856|FKHRL1|Fkhr2|Foxo3a	forkhead box O3	protein-coding
unique_peak1-6491-9-6-0.382258484346616-1.11707584880836	chr7	113168403	113168997	+	0	NA	Intergenic	Intergenic	52678	NR_030720	668128	Mm.484022	NR_030720		Gm8989	EG668128|Gm21911	very large inducible GTPase 1 pseudogene	pseudo
common_peak2-21402-24-45--0.730352053289296-1.16863888781394	chr11	82764100	82765040	+	0	NA	intron (NR_045932, intron 1 of 2)	intron (NR_045932, intron 1 of 2)	-1034	NM_183201	327978	Mm.42147	NM_183201	ENSMUSG00000054404	Slfn5	AI956840	schlafen 5	protein-coding
unique_peak1-3852-10-6-0.549060422951165-1.21398586181642	chr2	5318617	5319231	+	0	NA	intron (NM_001290374, intron 2 of 9)	intron (NM_001290374, intron 2 of 9)	260102	NM_028804	74186	Mm.274715	NM_028804	ENSMUSG00000026676	Ccdc3	2310045O21Rik	coiled-coil domain containing 3	protein-coding
common_peak1-17460-13-16--0.30899081061257-0.330004445983672	chr7	19272155	19272843	+	0	NA	Intergenic	Intergenic	-1158	NM_054058	434540	Mm.479863	NM_054058		Psg20	Cea7|EG434540	pregnancy-specific glycoprotein 20	protein-coding
common_peak2-24784-14-26--0.855671341805824-0.949797625454538	chr17	63863166	63863837	+	0	NA	Intergenic	Intergenic	-13572	NM_015794	50758	Mm.136366	NM_015794		Fbxl17	6330576B01Rik|AI452053|BB073797|C130023C01Rik|Fbx13|Fbxo13	F-box and leucine-rich repeat protein 17	protein-coding
unique_peak2-37397-9-10--0.269818212233077-1.05503135781948	chr4	141297354	141297906	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-4960	NM_001081408	75986	Mm.30032	NM_001081408	ENSMUSG00000040706	Agmat	5033405N08Rik	agmatine ureohydrolase (agmatinase)	protein-coding
unique_peak1-1586-10-7-0.356415345008769-1.12966497611638	chr13	33964453	33965197	+	0	NA	Intergenic	Lx8|LINE|L1	-29548	NM_001045535	435350	Mm.263418	NM_001045535	ENSMUSG00000069248	Serpinb6e	Gm11396|OTTMUSG00000000720|SPI3B|ovalbumin	serine (or cysteine) peptidase inhibitor, clade B, member 6e	protein-coding
unique_peak1-4794-10-0-3.35641534500877-3.31132995230379	chr3	132795243	132795750	+	0	NA	Intergenic	Intergenic	40579	NM_027927	71793	Mm.246726	NM_027927	ENSMUSG00000028016	Ints12	1110020M19Rik|2810027J24Rik|4930529N21Rik|A230056J18Rik|AI666778|Phf22	integrator complex subunit 12	protein-coding
unique_peak1-445-6-5--0.0195643903408542-0.947717972411649	chr1	166046528	166046999	+	0	NA	intron (NM_011347, intron 1 of 15)	intron (NM_011347, intron 1 of 15)	1368	NM_011347	20344	Mm.3337	NM_011347	ENSMUSG00000026580	Selp	CD62P|GMP-140|Grmp|LECAM3|PADGEM	selectin, platelet	protein-coding
unique_peak1-6586-8-5-0.420259917226415-1.10484139239135	chr7	143473515	143473981	+	0	NA	intron (NR_102277, intron 3 of 3)	intron (NR_102277, intron 3 of 3)	13741	NR_102277	77383	Mm.227745	NR_102277		C030029H02Rik	-	RIKEN cDNA C030029H02 gene	ncRNA
common_peak1-11851-47-90--0.572953215432149-1.51798608485256	chr16	90829941	90831092	+	0	NA	promoter-TSS (NM_027627)	promoter-TSS (NM_027627)	-588	NM_027627	70967	Mm.253077	NM_027627		Eva1c	1700092M14Rik|4931408A02Rik|Fam176c	eva-1 homolog C (C. elegans)	protein-coding
common_peak2-26034-67-84-0.135020546645293-0.40044532686291	chr19	61199457	61200475	+	0	NA	Intergenic	MTB|LTR|MaLR	52246	NM_001177513	633057	Mm.426097	NM_001177513	ENSMUSG00000094649	Gm7102	EG633057	predicted gene 7102	protein-coding
common_peak2-23509-16-21--0.341167976369236-0.392630012299441	chr15	76511255	76512007	+	0	NA	intron (NM_033371, intron 1 of 10)	intron (NM_033371, intron 1 of 10)	9521	NM_033371	73062	Mm.322901	NM_033371	ENSMUSG00000033819	Ppp1r16a	2900084E10Rik|Mypt3|R75527	protein phosphatase 1, regulatory (inhibitor) subunit 16A	protein-coding
common_peak2-25762-22-12-0.946844386946312-1.31435121412491	chr19	30125576	30126054	+	0	NA	intron (NM_144873, intron 2 of 15)	PB1D10|SINE|Alu	20812	NM_144873	109113	Mm.313364	NM_144873	ENSMUSG00000024817	Uhrf2	2310065A22Rik|AI426270|AW214556|D130071B19Rik|Nirf	ubiquitin-like, containing PHD and RING finger domains 2	protein-coding
common_peak2-20184-6-10--0.894033508256995-1.21398586181642	chr1	172274276	172274749	+	0	NA	intron (NM_027528, intron 5 of 7)	intron (NM_027528, intron 5 of 7)	35520	NM_001039593	76925	Mm.33631	NM_001039593	ENSMUSG00000042800	1700015E13Rik	-	RIKEN cDNA 1700015E13 gene	protein-coding
common_peak1-19080-19-30--0.551508983725189-0.647723624534446	chr9	70678967	70679708	+	0	NA	intron (NM_008280, intron 1 of 8)	MTD|LTR|MaLR	103278	NM_008280	15450	Mm.390187	NM_008280	ENSMUSG00000032207	Lipc	AI256194|HL|Hpl	lipase, hepatic	protein-coding
common_peak2-26025-105-142-0.161462573744777-0.534134040468767	chr19	59942802	59944082	+	0	NA	Intergenic	Intergenic	75825	NM_001033172	74998	Mm.24167	NM_001033172	ENSMUSG00000040022	Rab11fip2	4930470G04Rik|A830046J09Rik|AW558126|Nrip11	RAB11 family interacting protein 2 (class I)	protein-coding
common_peak2-20403-9-8-0.0196884049619079-1.03275496310833	chr10	23796198	23796698	+	0	NA	exon (NM_001010830, exon 1 of 1)	exon (NM_001010830, exon 1 of 1)	142	NM_001010830	215859	Mm.377239	NM_001010830	ENSMUSG00000096442	Taar8a	Gm230|taR-8a	trace amine-associated receptor 8A	protein-coding
common_peak2-26108-39-46-0.061172395241516-0.321605260051241	chr2	4480341	4481150	+	0	NA	promoter-TSS (NM_001177844)	promoter-TSS (NM_001177844)	-55	NM_001177844	209630	Mm.37932	NM_172475	ENSMUSG00000026657	Frmd4a	2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|OTTMUSG00000010806|mKIAA1294	FERM domain containing 4A	protein-coding
common_peak2-20387-22-22-0.123722149030391-0.342639663781856	chr10	19531492	19532333	+	0	NA	Intergenic	Intergenic	39353	NM_029529	76157	Mm.74324	NM_029529	ENSMUSG00000050473	Slc35d3	6230421J19Rik|Frcl1	solute carrier family 35, member D3	protein-coding
common_peak2-27606-54-91--0.350476194427279-0.783046215318582	chr3	103790613	103791758	+	0	NA	intron (NM_001163469, intron 6 of 17)	intron (NM_001163469, intron 6 of 17)	-18946	NR_030676	100125931	Mm.400392	NR_030676	ENSMUSG00000089998	Phtf1os	A130049A11Rik	putative homeodomain transcription factor 1, opposite strand	ncRNA
unique_peak2-32603-1-6--2.43441193227435-1.56314192529759	chr1	91857334	91857734	+	0	NA	intron (NM_139152, intron 4 of 5)	intron (NM_139152, intron 4 of 5)	-29783	NM_010262	14472	Mm.204730	NM_010262		Gbx2	D130058E05Rik|Gbx-2|MMoxA|Stra7	gastrulation brain homeobox 2	protein-coding
unique_peak1-2424-12-1-2.64877598508764-3.36932189928148	chr15	101071686	101072288	+	0	NA	Intergenic	Intergenic	-16370	NR_045328	380977	Mm.399924	NR_045326	ENSMUSG00000097915	A330009N23Rik	-	RIKEN cDNA A330009N23 gene	ncRNA
common_peak2-23387-29-48--0.502419763500098-0.744998914848106	chr15	58214213	58215803	+	0	NA	intron (NM_027211, intron 1 of 8)	intron (NM_027211, intron 1 of 8)	5821	NM_027211	69787	Mm.237985	NM_027211		Anxa13	1810034H17Rik|AV055219	annexin A13	protein-coding
common_peak1-8190-10-10--0.103016273628528-0.301029995663987	chr10	108445470	108445952	+	0	NA	intron (NM_001252341, intron 1 of 11)	(TG)n|Simple_repeat|Simple_repeat	2320	NM_009306	20979	Mm.289702	NM_009306	ENSMUSG00000035864	Syt1	AW124717|G630098F17Rik|SytI	synaptotagmin I	protein-coding
unique_peak2-39673-9-19--1.13231468848314-1.09394599973099	chr9	108264125	108264845	+	0	NA	intron (NM_011678, intron 4 of 21)	intron (NM_011678, intron 4 of 21)	14323	NM_011678	22258	Mm.3974	NM_011678	ENSMUSG00000032612	Usp4	F730026I20Rik|Unp|mKIAA4155	ubiquitin specific peptidase 4 (proto-oncogene)	protein-coding
unique_peak2-37933-8-10--0.454209200689727-1.078512453669	chr5	146705689	146706088	+	0	NA	Intergenic	L1VL2|LINE|L1	-14458	NM_007818	13112	Mm.332844	NM_007818	ENSMUSG00000056035	Cyp3a11	AI256190|Cyp3a|IIIAm1|Pcn	cytochrome P450, family 3, subfamily a, polypeptide 11	protein-coding
common_peak2-29537-18-10-0.853487532591054-1.03889213727317	chr6	38848094	38848579	+	0	NA	Intergenic	URR1B|DNA|MER1_type	-20649	NM_011539	21391	Mm.4054	NM_011539	ENSMUSG00000029925	Tbxas1	CYP5|CYP5A1|THAS|TS|TXAS|TXS	thromboxane A synthase 1, platelet	protein-coding
common_peak2-27927-14-5-1.31425365963649-1.4372489031793	chr4	14863618	14864048	+	0	NA	intron (NM_001243100, intron 2 of 5)	intron (NM_001243100, intron 2 of 5)	6045	NM_001243100	100038514	Mm.331495	NM_001243100		Gm11837	OTTMUSG00000004551	predicted gene 11837	protein-coding
common_peak1-17694-155-204-0.318120400308018-1.58021070228806	chr7	70357620	70361741	+	0	NA	Intergenic	Intergenic	-2268	NM_007390	11441	Mm.113464	NM_007390	ENSMUSG00000030525	Chrna7	Acra7|alpha7	cholinergic receptor, nicotinic, alpha polypeptide 7	protein-coding
unique_peak2-39884-4-6--0.830815435910851-0.989110657569874	chrX	75096174	75096569	+	0	NA	intron (NM_017471, intron 1 of 6)	L1Md_F2|LINE|L1	2468	NM_017471	54192	Mm.8034	NM_017471	ENSMUSG00000000003	Pbsn	PB|Prbs	probasin	protein-coding
unique_peak1-3142-22-5-2.06232160436625-3.46164246247458	chr18	36417658	36418593	+	0	NA	Intergenic	Intergenic	-22691	NM_008989	19290	Mm.231802	NM_008989		Pura	CAGER-1|Pur-alpha|ssCRE-BP	purine rich element binding protein A	protein-coding
common_peak1-15497-12-24--0.995080204687086-1.0220094258199	chr4	114999952	115000610	+	0	NA	intron (NM_177406, intron 8 of 11)	intron (NM_177406, intron 8 of 11)	28630	NM_177406	277753	Mm.276106	NM_177406	ENSMUSG00000066071	Cyp4a12a	BC025936|Cyp4a12	cytochrome P450, family 4, subfamily a, polypeptide 12a	protein-coding
common_peak2-20139-13-10-0.319040412000471-0.446472590016315	chr1	166409361	166409833	+	0	NA	Intergenic	L1ME1|LINE|L1	-21111	NM_009721	11931	Mm.4550	NM_009721	ENSMUSG00000026576	Atp1b1	Atp4b|Atpb|Atpb-1|NKbeta1	ATPase, Na+/K+ transporting, beta 1 polypeptide	protein-coding
common_peak2-24957-30-26-0.414787907328405-0.652802052802684	chr18	3280750	3281570	+	0	NA	intron (NM_013498, intron 4 of 6)	intron (NM_013498, intron 4 of 6)	585	NM_001110854	12916	Mm.5244	NM_013498	ENSMUSG00000063889	Crem	ICER|ICERI	cAMP responsive element modulator	protein-coding
unique_peak2-36701-5-11--1.28934283672701-1.477227296591	chr3	40893511	40894018	+	0	NA	Intergenic	Charlie2b|DNA|MER1_type	-6796	NM_027558	70804	Mm.40321	NM_027558	ENSMUSG00000049940	Pgrmc2	4631434O19Rik|5730409G06Rik|DG6|PMBP	progesterone receptor membrane component 2	protein-coding
common_peak1-8969-19-12-0.702247608520594-0.840839978588874	chr11	58103967	58104864	+	0	NA	Intergenic	Intergenic	-16156	NM_182996	103836	Mm.41440	NM_182996	ENSMUSG00000037243	Zfp692	AI746306|AI839920|Zfp692-ps|Znf692	zinc finger protein 692	protein-coding
unique_peak2-33574-5-5--0.289342836727009-0.909929411522249	chr11	85695650	85696056	+	0	NA	Intergenic	Intergenic	-7712	NM_011536	21387	Mm.275336	NM_011536	ENSMUSG00000000094	Tbx4	3930401C23	T-box 4	protein-coding
common_peak1-8216-18-27--0.494435770829252-0.528262014464654	chr10	8886560	8887188	+	0	NA	Intergenic	ORR1E|LTR|MaLR	-281006	NM_175155	70097	Mm.338275	NM_175155	ENSMUSG00000015305	Sash1	1100001C18Rik|2500002E12Rik|A330076K04Rik|mKIAA0790	SAM and SH3 domain containing 1	protein-coding
unique_peak2-38179-4-6--0.830815435910851-0.989110657569874	chr6	91691177	91691575	+	0	NA	intron (NM_009320, intron 9 of 14)	intron (NM_009320, intron 9 of 14)	57315	NM_009320	21366	Mm.395650	NM_009320	ENSMUSG00000030096	Slc6a6	AA589629|C80501|Taut	solute carrier family 6 (neurotransmitter transporter, taurine), member 6	protein-coding
unique_peak1-2662-13-2-2.19350952991661-3.03832868024006	chr16	55378627	55379238	+	0	NA	Intergenic	MER92B|LTR|ERV1	-95582	NM_178720	239852	Mm.245045	NM_178720	ENSMUSG00000064310	Zpld1	9430016A21Rik	zona pellucida like domain containing 1	protein-coding
common_peak1-8243-56-103--0.464843892701849-1.26143771187977	chr10	17721951	17724772	+	0	NA	Intergenic	RLTR25A|LTR|ERVK	19697	NM_028440	73112	Mm.276041	NM_028440	ENSMUSG00000078453	Abracl	1700028I04Rik|3110003A17Rik	ABRA C-terminal like	protein-coding
common_peak1-11306-15-43--1.44726686808164-3.08659436536937	chr15	84231776	84232517	+	0	NA	intron (NM_001163145, intron 4 of 4)	intron (NM_001163145, intron 4 of 4)	45381	NM_001163145	72301	Mm.275387	NM_001163145	ENSMUSG00000062760	1810041L15Rik	Kiaa1644	RIKEN cDNA 1810041L15 gene	protein-coding
common_peak1-14800-33-84--1.07805337361217-3.76632018019701	chr3	90079635	90080409	+	0	NA	intron (NM_201407, intron 18 of 27)	intron (NM_201407, intron 18 of 27)	5951	NR_105979	102465612		NR_105979		Mir7012	mmu-mir-7012	microRNA mir-7012	ncRNA
unique_peak2-39625-3-7--1.41398308995928-1.23214870625617	chr9	95814188	95814547	+	0	NA	intron (NM_019864, intron 28 of 46)	intron (NM_019864, intron 28 of 46)	-40812	NM_011916	24127	Mm.291179	NM_011916	ENSMUSG00000032410	Xrn1	Dhm2|exo|mXrn1	5'-3' exoribonuclease 1	protein-coding
unique_peak2-32705-4-7--1.02346051385325-1.09384600808989	chr1	152635492	152635908	+	0	NA	intron (NM_001024720, intron 11 of 106)	L1Md_F2|LINE|L1	204865	NM_001024720	545370	Mm.379425	NM_001024720	ENSMUSG00000066842	Hmcn1	EG545370|Gm201	hemicentin 1	protein-coding
common_peak1-9000-43-24-1.13870699574898-3.01487716443559	chr11	60113730	60115443	+	0	NA	intron (NM_153080, intron 1 of 14)	intron (NM_153080, intron 1 of 14)	51821	NM_153080	216810	Mm.218875	NM_153080	ENSMUSG00000000538	Tom1l2	2900016I08Rik|A730055F12Rik|AU042072|Srebf1	target of myb1-like 2 (chicken)	protein-coding
common_peak1-9523-21-31--0.430510734733764-0.49501414494053	chr11	115868670	115869735	+	0	NA	TTS (NM_016905)	TTS (NM_016905)	4831	NM_016905	14635	Mm.2820	NM_016905	ENSMUSG00000020766	Galk1	AA409894|GALK|Gk|Glk|Glk1	galactokinase 1	protein-coding
common_peak2-21017-56-56-0.402705811274502-0.901543963465162	chr11	30649025	30649725	+	0	NA	Intergenic	Intergenic	-22400	NM_134013	103554	Mm.240066	NM_134013	ENSMUSG00000040850	Psme4	AA409398|AU041366|TEMO|mKIAA0077	proteasome (prosome, macropain) activator subunit 4	protein-coding
unique_peak2-33966-3-7--1.41398308995928-1.23214870625617	chr12	81532490	81532940	+	0	NA	intron (NM_177267, intron 1 of 8)	MIRb|SINE|MIR	4873	NM_177267	320808	Mm.220310	NM_177267	ENSMUSG00000049106	Dcaf5	9430020B07Rik|AI325023|AI430035|AI848110|AW124614|BCRG2|BCRP2|Wdr22	DDB1 and CUL4 associated factor 5	protein-coding
unique_peak2-32823-7-9--0.522837264589173-1.05908390183068	chr1	186587222	186587784	+	0	NA	Intergenic	Intergenic	-31131	NM_008250	15284	Mm.1347	NM_008250	ENSMUSG00000039377	Hlx	Hlx1	H2.0-like homeobox	protein-coding
common_peak2-24085-3-8--1.58390809140159-1.39487600375387	chr16	31596793	31597191	+	0	NA	Intergenic	RLTR10|LTR|ERVK	-66537	NM_001252435	13383	Mm.382	NM_007862	ENSMUSG00000022770	Dlg1	B130052P05Rik|Dlgh1|E-dlg/SAP97|SAP-97|SAP97|mKIAA4187	discs, large homolog 1 (Drosophila)	protein-coding
unique_peak2-36090-6-8--0.60452689106201-1.03789460276074	chr19	57197364	57197992	+	0	NA	intron (NM_001290813, intron 6 of 20)	B1_Mur3|SINE|Alu	-4164	NM_001103178	226251	Mm.217161	NM_178688	ENSMUSG00000025085	Ablim1	2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059	actin-binding LIM protein 1	protein-coding
common_peak2-31927-12-11-0.0638134843664826-0.337263207250336	chr9	62980444	62980914	+	0	NA	Intergenic	Intergenic	14108	NM_172446	207667	Mm.36349	NM_172446	ENSMUSG00000022245	Skor1	AV273001|C230094B15Rik|Corl1|Lbxcor1	SKI family transcriptional corepressor 1	protein-coding
unique_peak1-6876-7-1-1.79909083029819-1.80617997398389	chr8	90880962	90881453	+	0	NA	intron (NM_012047, intron 4 of 16)	intron (NM_012047, intron 4 of 16)	4883	NM_012047	26992	Mm.5400	NM_012047		Brd7	BP75|CELTIX1|Ptpn13ip	bromodomain containing 7	protein-coding
unique_peak1-1155-13-6-0.971117108580164-1.01572999746118	chr11	98930960	98931684	+	0	NA	intron (NM_172564, intron 12 of 12)	RMER17B|LTR|ERVK	19298	NM_172564	217169	Mm.262067	NM_172564	ENSMUSG00000017607	Tns4	9930017A07Rik|AA589547|AU016405|Cten	tensin 4	protein-coding
common_peak1-9107-15-25--0.688274967585436-0.73354163167379	chr11	70969406	70970089	+	0	NA	exon (NM_001040696, exon 14 of 15)	exon (NM_001040696, exon 14 of 15)	-11541	NM_001004142	195046	Mm.240227	NM_001004142		Nlrp1a	CARD7|DEFCAP|Gm14|Gm15|NAC|Nalp1|Nalp1a|Nlrp1|PP1044	NLR family, pyrin domain containing 1A	protein-coding
common_peak2-21113-29-35--0.0576349208272013-0.301029995663967	chr11	52361109	52361936	+	0	NA	Intergenic	MTD|LTR|MaLR	151592	NM_153117	213673	Mm.291979	NM_153117	ENSMUSG00000036275	9530068E07Rik	C85061|Kct2	RIKEN cDNA 9530068E07 gene	protein-coding
common_peak1-11077-31-19-0.903310575925761-1.57996244908225	chr15	58871938	58872914	+	0	NA	intron (NM_001146180, intron 3 of 13)	intron (NM_001146180, intron 3 of 13)	41155	NM_001146180	211401	Mm.215481	NM_144800	ENSMUSG00000022353	Mtss1	2310003N14Rik|BC024131|D130001D01Rik|Mim|mKIAA0429	metastasis suppressor 1	protein-coding
unique_peak1-6912-6-3-0.565398110380302-1.08602067057793	chr8	105958154	105958657	+	0	NA	Intergenic	RMER2|LTR|ERV1	-86971	NR_036588	69794	Mm.396139	NR_036588		1600027J07Rik	-	RIKEN cDNA 1600027J07 gene	ncRNA
common_peak2-21965-10-19--0.965512749878593-0.917676348953458	chr12	41024036	41024642	+	0	NA	Intergenic	RMER21B|LTR|ERV1	74388	NR_045157	629820	Mm.435540	NR_045157	ENSMUSG00000035983	Gm7008	EG629820	predicted gene 7008	ncRNA
common_peak1-16093-127-186-0.10449205144042-0.427310021356622	chr5	64803348	64806549	+	0	NA	Intergenic	Intergenic	54233	NR_040681	69999	Mm.261413	NR_040681		1700027F09Rik	-	RIKEN cDNA 1700027F09 gene	ncRNA
unique_peak1-5993-10-7-0.356415345008769-1.12966497611638	chr6	99406429	99406964	+	0	NA	Intergenic	Intergenic	-21357	NM_053202	108655	Mm.234965	NM_053202	ENSMUSG00000030067	Foxp1	3110052D19Rik|4932443N09Rik|AI461938|AW494214	forkhead box P1	protein-coding
unique_peak1-5471-11-3-1.50869358425161-1.95434855131066	chr5	125139868	125140486	+	0	NA	intron (NM_011596, intron 9 of 19)	intron (NM_011596, intron 9 of 19)	60544	NM_011596	21871	Mm.1158	NM_011596		Atp6v0a2	8430408C20Rik|AI385560|ATP6a2|AW489264|Atp6n1d|Atp6n2|C76904|ISF|J6B7|SHIF|Stv1|TJ6M|TJ6s|Tj6|V-ATPase 116 kDa|V-ATPase a2	ATPase, H+ transporting, lysosomal V0 subunit A2	protein-coding
common_peak2-26595-17-12-0.517856620063946-0.647240723060192	chr2	112255563	112256136	+	0	NA	Intergenic	Intergenic	36481	NM_024254	72425	Mm.425091	NM_024254	ENSMUSG00000027132	Katnbl1	2410042D21Rik|AA166487|AA473307|AI467442	katanin p80 subunit B like 1	protein-coding
common_peak1-19493-30-86--1.27326808635685-4.88454695891955	chrX	157597869	157599003	+	0	NA	Intergenic	Intergenic	-2246	NM_001290652	107815	Mm.159173	NM_133194	ENSMUSG00000000037	Scml2	4932420G07Rik	sex comb on midleg-like 2 (Drosophila)	protein-coding
common_peak1-16528-20-29--0.418815811017326-0.51032171069054	chr5	142629433	142630463	+	0	NA	intron (NM_177879, intron 35 of 44)	MTE2b|LTR|MaLR	-247503	NM_199068	17425	Mm.24214	NM_010812	ENSMUSG00000056493	Foxk1	A630048H08Rik|AI463295|ENSMUSG00000075577|Gm10868|Mnf	forkhead box K1	protein-coding
unique_peak1-4636-8-2-1.42025991722641-1.65811743852845	chr3	87147263	87147778	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-14283	NM_009690	11801	Mm.6676	NM_009690	ENSMUSG00000015854	Cd5l	1/6|AAC-11|AI047839|Api6|CT2|Pdp|Sp-alpha	CD5 antigen-like	protein-coding
common_peak1-11945-21-19-0.247561170378873-0.427564438475253	chr17	4868706	4869657	+	0	NA	Intergenic	Intergenic	-125893	NM_001085355	239985	Mm.133401	NM_001085355	ENSMUSG00000069729	Arid1b	8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235	AT rich interactive domain 1B (SWI-like)	protein-coding
unique_peak1-3392-12-5-1.06381348436648-1.78669045979184	chr19	4190625	4191219	+	0	NA	intron (NM_178650, intron 1 of 9)	intron (NM_178650, intron 1 of 9)	125	NM_178650	108995	Mm.288312	NM_178650	ENSMUSG00000040247	Tbc1d10c	1810062O14Rik|AI428527	TBC1 domain family, member 10c	protein-coding
common_peak1-18685-13-25--0.921967687503323-0.983972868822056	chr8	120264859	120265417	+	0	NA	intron (NM_008290, intron 2 of 4)	intron (NM_008290, intron 2 of 4)	39292	NM_008290	15486	Mm.276466	NM_008290	ENSMUSG00000031844	Hsd17b2	AI194836|AI194967|AI255511	hydroxysteroid (17-beta) dehydrogenase 2	protein-coding
unique_peak2-35413-3-5--0.998945590680433-0.96108193396963	chr17	33731447	33731831	+	0	NA	intron (NM_053214, intron 19 of 27)	RSINE1|SINE|B4	-34398	NR_034153	328801	Mm.181488	NM_026712	ENSMUSG00000073423	Zfp414	0610030H11Rik|Znf414	zinc finger protein 414	protein-coding
common_peak2-21668-13-6-0.971117108580164-1.01572999746118	chr11	103141789	103142212	+	0	NA	Intergenic	Charlie1b|DNA|MER1_type	-13285	NM_016896	53859	Mm.158981	NM_016896	ENSMUSG00000020941	Map3k14	Nik|aly	mitogen-activated protein kinase kinase kinase 14	protein-coding
unique_peak1-5545-10-3-1.35641534500877-1.75805390616669	chr5	142811244	142811714	+	0	NA	Intergenic	Intergenic	-65972	NM_199068	17425	Mm.24214	NM_010812	ENSMUSG00000056493	Foxk1	A630048H08Rik|AI463295|ENSMUSG00000075577|Gm10868|Mnf	forkhead box K1	protein-coding
common_peak1-15843-16-8-0.948338640825749-1.02063122982878	chr5	148995936	148996788	+	0	NA	intron (NM_029920, intron 4 of 14)	(TTC)n|Simple_repeat|Simple_repeat	215118	NM_007513	11987	Mm.275489	NM_007513	ENSMUSG00000041313	Slc7a1	4831426K01Rik|AI447493|Atrc-1|Atrc1|Cat1|Rec-1|Rev-1|mCAT-1	solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	protein-coding
common_peak2-28631-32-39--0.0428360756677026-0.301029995663967	chr5	28070161	28071147	+	0	NA	exon (NM_018878, exon 20 of 21)	exon (NM_018878, exon 20 of 21)	47436	NM_018878	55982	Mm.277190	NM_018878	ENSMUSG00000002221	Paxip1	D5Ertd149e|PTIP	PAX interacting (with transcription-activation domain) protein 1	protein-coding
common_peak2-28849-9-9--0.132314688483142-1.03275496310833	chr5	73193762	73194246	+	0	NA	intron (NM_013689, intron 3 of 17)	intron (NM_013689, intron 3 of 17)	-49988	NM_001122754	22165	Mm.3264	NM_013698	ENSMUSG00000054892	Txk	A130089B16Rik|Btkl|PTK-RL-18|PTK4|Rlk	TXK tyrosine kinase	protein-coding
common_peak2-30439-11-17--0.661231417190699-0.58239619684445	chr7	44928833	44929523	+	0	NA	Intergenic	Intergenic	1590726	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak2-39132-9-12--0.510826311736872-0.394412252720706	chr8	84723069	84723817	+	0	NA	Intergenic	Intergenic	203042	NM_001254747	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
unique_peak1-1469-11-3-1.50869358425161-1.95434855131066	chr12	111159873	111160392	+	0	NA	Intergenic	Intergenic	174044	NR_037233	100499517		NR_037233	miRBase:MI0014035	Mir3072	mmu-mir-3072	microRNA 3072	ncRNA
common_peak1-7960-11-14--0.398197011356905-0.379391706698377	chr1	155082893	155083520	+	0	NA	intron (NM_010683, intron 18 of 27)	(TG)n|Simple_repeat|Simple_repeat	-49629	NM_008485	16782	Mm.329272	NM_008485	ENSMUSG00000026479	Lamc2	AA589349	laminin, gamma 2	protein-coding
common_peak2-30003-48-37-0.722999637791229-1.78594796811656	chr6	124740474	124741641	+	0	NA	Intergenic	B4|SINE|B4	-11321	NM_013588	16977	Mm.3207	NM_013588	ENSMUSG00000030125	Lrrc23	4921537K05Rik|B7|Lrpb7	leucine rich repeat containing 23	protein-coding
common_peak1-13624-64-39-1.14351830682124-4.51476170683141	chr2	25144935	25147096	+	0	NA	promoter-TSS (NM_001242940)	promoter-TSS (NM_001242940)	584	NM_146117	227618	Mm.275228	NM_146117	ENSMUSG00000026961	Lrrc26	-	leucine rich repeat containing 26	protein-coding
common_peak2-20362-12-10-0.189344366450341-0.386243247519795	chr10	12868360	12868887	+	0	NA	TTS (NM_029172)	TTS (NM_029172)	29206	NM_029172	75122	Mm.159433	NM_029172	ENSMUSG00000019815	Zc2hc1b	4930519B02Rik|Fam164b	zinc finger, C2HC-type containing 1B	protein-coding
common_peak1-14799-14-19--0.422711934529718-0.403453972741636	chr3	90052718	90053498	+	0	NA	intron (NM_013901, intron 2 of 3)	intron (NM_013901, intron 2 of 3)	994	NM_013901	30791	Mm.294709	NM_013901	ENSMUSG00000052310	Slc39a1	Zip1|Zirtl	solute carrier family 39 (zinc transporter), member 1	protein-coding
common_peak2-22930-32-27-0.471737097162056-0.777451270049544	chr14	46965697	46966518	+	0	NA	Intergenic	B1F|SINE|Alu	-33092	NR_037981	100041724	Mm.383311	NM_001099324	ENSMUSG00000079261	Gm15217	OTTMUSG00000019524	predicted gene 15217	ncRNA
common_peak2-23384-9-9--0.132314688483142-1.03275496310833	chr15	57975510	57976030	+	0	NA	intron (NM_029734, intron 1 of 5)	RLTR25B|LTR|ERVK	2779	NM_029734	76773	Mm.26771	NM_029734	ENSMUSG00000022359	Wdyhv1	2410187C16Rik|AU014961|AW550036|Ntaq1	WDYHV motif containing 1	protein-coding
common_peak1-16659-41-29-0.794258109240142-1.7388889233551	chr6	120158826	120160415	+	0	NA	intron (NM_198884, intron 15 of 19)	intron (NM_198884, intron 15 of 19)	84957	NM_198884	330406	Mm.321840	NM_198884	ENSMUSG00000041372	B4galnt3	AB114826|B4GalNAcT3|C330047A21	beta-1,4-N-acetyl-galactosaminyl transferase 3	protein-coding
common_peak2-24067-74-141--0.433860542526075-1.44914386832427	chr16	30387537	30389795	+	0	NA	promoter-TSS (NM_001128096)	promoter-TSS (NM_001128096)	-50	NM_001128096	224088	Mm.8924	NM_001128094	ENSMUSG00000022533	Atp13a3	AU022875|Gm1745|Gm541|Gm542	ATPase type 13A3	protein-coding
common_peak2-30979-57-36-1.05657967444998-3.60623125797087	chr8	3417168	3418429	+	0	NA	intron (NM_133962, intron 1 of 19)	intron (NM_133962, intron 1 of 19)	24790	NM_133962	102098	Mm.170461	NM_133962	ENSMUSG00000004568	Arhgef18	AI467246|D030053O22Rik	rho/rac guanine nucleotide exchange factor (GEF) 18	protein-coding
unique_peak2-34912-2-6--1.72480917832092-1.26211192963361	chr15	83405831	83406175	+	0	NA	3' UTR (NM_183017, exon 14 of 14)	3' UTR (NM_183017, exon 14 of 14)	12000	NM_009775	12257	Mm.1508	NM_009775	ENSMUSG00000041736	Tspo	Bzrp|IBP|PBR|Tspo1	translocator protein	protein-coding
unique_peak2-38762-6-8--0.60452689106201-1.03789460276074	chr7	121981313	121981708	+	0	NA	intron (NM_173767, intron 9 of 12)	intron (NM_173767, intron 9 of 12)	92230	NM_173767	233752	Mm.83037	NM_173767	ENSMUSG00000048782	Insc	3830422K02Rik|C730020D23	inscuteable homolog (Drosophila)	protein-coding
common_peak2-28806-10-11--0.228547155712387-0.31137425193576	chr5	64811569	64812056	+	0	NA	Intergenic	MTD-int|LTR|MaLR	47369	NR_040681	69999	Mm.261413	NR_040681		1700027F09Rik	-	RIKEN cDNA 1700027F09 gene	ncRNA
common_peak2-28548-18-27--0.494435770829252-0.528262014464654	chr5	3869874	3871045	+	0	NA	Intergenic	RLTR25A|LTR|ERVK	23474	NM_001013023	545725	Mm.99593	NM_172135	ENSMUSG00000040429	Mterf1a	4931431L11Rik|9230106K09Rik|Mterf|Mterf1	mitochondrial transcription termination factor 1a	protein-coding
unique_peak1-5757-7-1-1.79909083029819-1.80617997398389	chr6	50732213	50732741	+	0	NA	intron (NR_045984, intron 2 of 4)	intron (NR_045984, intron 2 of 4)	6363	NR_045984	319981	Mm.131454	NR_045984		C530044C16Rik	-	RIKEN cDNA C530044C16 gene	ncRNA
common_peak2-24969-12-21--0.810655633549659-0.713635438203849	chr18	6135381	6135898	+	0	NA	intron (NM_001039692, intron 1 of 18)	CpG	457	NM_029277	75415	Mm.239675	NM_029277	ENSMUSG00000041225	Arhgap12	2810011M08Rik	Rho GTPase activating protein 12	protein-coding
unique_peak2-34964-3-8--1.58390809140159-1.39487600375387	chr15	97102407	97102904	+	0	NA	intron (NM_172293, intron 1 of 5)	intron (NM_172293, intron 1 of 5)	-24937	NM_001164602	105827	Mm.24005	NM_178114	ENSMUSG00000048218	Amigo2	AI415330|AMIGO-2|AW208913|Ali1	adhesion molecule with Ig like domain 2	protein-coding
common_peak2-23406-11-9-0.186765489364251-0.344532117358383	chr15	59409801	59410343	+	0	NA	intron (NM_026746, intron 4 of 6)	L1_Mus2|LINE|L1	-70137	NM_144549	211770	Mm.40298	NM_144549	ENSMUSG00000032501	Trib1	A530090O15Rik|TRB-1|Trb1	tribbles homolog 1 (Drosophila)	protein-coding
common_peak1-17414-38-66--0.494636531159242-0.920775588791488	chr7	5079879	5081134	+	0	NA	Intergenic	RLTR13D6|LTR|ERVK	-2954	NM_009028	19428	Mm.322186	NM_009028	ENSMUSG00000083649	Rasl2-9	M2|Ran|Ran/M2|Rasl2-9-ps	RAS-like, family 2, locus 9	protein-coding
common_peak2-21710-28-40--0.304592884796621-0.447010559430123	chr11	107479446	107480176	+	0	NA	intron (NM_198298, intron 12 of 31)	intron (NM_198298, intron 12 of 31)	-19225	NR_105897	102465562		NR_105897		Mir6932	mmu-mir-6932	microRNA mir-6932	ncRNA
unique_peak2-36112-4-6--0.830815435910851-0.989110657569874	chr2	3159177	3159598	+	0	NA	Intergenic	MTA_Mm-int|LTR|MaLR	-42097	NM_008708	18108	Mm.65021	NM_008708	ENSMUSG00000026643	Nmt2	A930001K02Rik|AI605445|AU044698|hNMT-2	N-myristoyltransferase 2	protein-coding
unique_peak1-3022-9-0-3.18961340640422-3.01029995663981	chr17	93485216	93485710	+	0	NA	Intergenic	Lx|LINE|L1	-113299	NM_009625	11516	Mm.3407	NM_009625	ENSMUSG00000024256	Adcyap1	PACAP	adenylate cyclase activating polypeptide 1	protein-coding
common_peak2-21291-35-39-0.109442163575141-0.343417008601348	chr11	70699742	70701041	+	0	NA	intron (NM_001291141, intron 2 of 16)	intron (NM_001291141, intron 2 of 16)	42128	NM_001291142	54189	Mm.7087	NM_019400	ENSMUSG00000020817	Rabep1	Rab5ep|rabaptin-5|rabaptin-5alpha	rabaptin, RAB GTPase binding effector protein 1	protein-coding
unique_peak1-5445-12-1-2.64877598508764-3.36932189928148	chr5	118156424	118157047	+	0	NA	exon (NM_001114545, exon 13 of 20)	exon (NM_001114545, exon 13 of 20)	-160393	NM_008712	18125	Mm.44249	NM_008712	ENSMUSG00000029361	Nos1	2310005C01Rik|NO|NOS-I|Nos-1|bNOS|nNOS	nitric oxide synthase 1, neuronal	protein-coding
common_peak2-19852-5-8--0.874305337448166-1.10484139239135	chr1	91398933	91399250	+	0	NA	intron (NM_001037136, intron 1 of 16)	intron (NM_001037136, intron 1 of 16)	47705	NM_001037136	347722	Mm.291135	NM_178119	ENSMUSG00000055013	Agap1	Centg2|Ggap1|R75364|mKIAA1099	ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	protein-coding
common_peak2-23701-13-22--0.745089925419244-0.690311289528838	chr15	88863281	88864212	+	0	NA	intron (NM_031260, intron 22 of 26)	L1Md_F2|LINE|L1	-26410	NM_001002005	406218	Mm.483059	NM_001002005	ENSMUSG00000058441	Panx2	-	pannexin 2	protein-coding
common_peak1-14586-21-19-0.247561170378873-0.427564438475253	chr3	41408669	41409521	+	0	NA	intron (NM_001130185, intron 9 of 10)	intron (NM_001130185, intron 9 of 10)	40293	NM_001130186	269424	Mm.286285	NM_172303	ENSMUSG00000025764	Jade1	AU041499|D530048A03Rik|Phf17|mKIAA1807	jade family PHD finger 1	protein-coding
common_peak2-19613-17-20--0.174021084573723-0.306598483909156	chr1	34851792	34852400	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-6471	NM_183019	226970	Mm.41604	NM_183019	ENSMUSG00000037509	Arhgef4	9330140K16Rik|Asef|ENSMUSG00000070955	Rho guanine nucleotide exchange factor (GEF) 4	protein-coding
common_peak2-23694-11-15--0.491306415748387-0.435191258261915	chr15	88750763	88751388	+	0	NA	intron (NM_172818, intron 8 of 11)	intron (NM_172818, intron 8 of 11)	33773	NM_172818	239591	Mm.86807	NM_172818	ENSMUSG00000022388	Ttll8	1700019P01Rik|4933401B17	tubulin tyrosine ligase-like family, member 8	protein-coding
common_peak1-18153-14-18--0.348711353085941-0.360333814299795	chr8	11634772	11635607	+	0	NA	promoter-TSS (NR_030781)	promoter-TSS (NR_030781)	-153	NR_030781	102334	Mm.12459	NM_133971	ENSMUSG00000031508	Ankrd10	4833425P12Rik|AW549277	ankyrin repeat domain 10	protein-coding
common_peak2-21345-39-58--0.266881802442688-0.465606867440106	chr11	77077622	77078998	+	0	NA	intron (NM_177710, intron 1 of 14)	intron (NM_177710, intron 1 of 14)	48383	NM_177710	237860	Mm.440381	NM_177710	ENSMUSG00000037926	Ssh2	SSH-2|SSH-2L|mSSH-2L	slingshot homolog 2 (Drosophila)	protein-coding
unique_peak1-308-6-1-1.5653981103803-1.56314192529759	chr1	128069949	128070328	+	0	NA	intron (NM_172484, intron 5 of 14)	RLTR44B|LTR|ERVK	-261347	NM_145100	72585	Mm.490405	NM_145100		Lypd1	2700050C12Rik|AI853408|C530008O16Rik|Lynx2|Lypdc1	Ly6/Plaur domain containing 1	protein-coding
common_peak1-10833-10-14--0.550475250599749-0.446472590016315	chr14	103070258	103070730	+	0	NA	Intergenic	RLTR31_Mur|LTR|ERVK	311355	NR_039592	100628599		NR_039592	miRBase:MI0018042	Mir5130	mmu-mir-5130|mu-mir-5130	microRNA 5130	ncRNA
unique_peak1-6644-7-0-2.79909083029819-2.40823996531185	chr8	11270754	11271194	+	0	NA	intron (NM_009931, intron 1 of 51)	intron (NM_009931, intron 1 of 51)	41852	NM_009931	12826	Mm.738	NM_009931	ENSMUSG00000031502	Col4a1	Bru|Col4a-1|Del(8)44H|Raw|Svc	collagen, type IV, alpha 1	protein-coding
common_peak1-16451-14-11-0.314253659636488-0.435191258261915	chr5	135688056	135688768	+	0	NA	intron (NM_011714, intron 6 of 18)	intron (NM_011714, intron 6 of 18)	25219	NM_011714	22385	Mm.40331	NM_011714	ENSMUSG00000002748	Baz1b	C87820|WSTF|Wbscr9	bromodomain adjacent to zinc finger domain, 1B	protein-coding
common_peak1-7941-22-30--0.30691220529947-0.399869693390336	chr1	152902786	152903339	+	0	NA	Intergenic	Intergenic	-62497	NM_001024720	545370	Mm.379425	NM_001024720	ENSMUSG00000066842	Hmcn1	EG545370|Gm201	hemicentin 1	protein-coding
unique_peak1-6897-22-7-1.6472841050874-2.63337704757512	chr8	95149083	95150154	+	0	NA	Intergenic	B3|SINE|B2	-48570	NM_022428	64379	Mm.137247	NM_022428		Irx6	-	Iroquois related homeobox 6 (Drosophila)	protein-coding
common_peak2-32395-23-46--0.832821347168557-1.52341724501299	chrX	136741404	136742885	+	0	NA	Intergenic	Intergenic	-103343	NR_037208	100499512		NR_037208		Mir3475	mmu-mir-3475	microRNA 3475	ncRNA
unique_peak2-32495-4-13--1.83081543591085-2.04196296489515	chr1	44101932	44102423	+	0	NA	Intergenic	Intergenic	-25326	NM_001013799	433294	Mm.123621	NM_001013799	ENSMUSG00000047343	Mettl21c	A530098C11Rik	methyltransferase like 21C	protein-coding
common_peak1-11939-9-13--0.617741515653384-0.459837087125828	chr17	3314234	3314660	+	0	NA	Intergenic	CpG	-12126	NM_001122998	24001	Mm.137134	NM_011878	ENSMUSG00000023800	Tiam2	3000002F19Rik|STEF|mKIAA2016	T cell lymphoma invasion and metastasis 2	protein-coding
common_peak2-26721-41-76--0.565637835846241-1.28400020807614	chr2	130839048	130840806	+	0	NA	intron (NM_009730, intron 25 of 28)	B1F2|SINE|Alu	26207	NR_105969	102465606		NR_105969		Mir6973b	mmu-mir-6973b	microRNA mir-6973b	ncRNA
unique_peak1-231-10-4-1.03448725012141-1.5150158574804	chr1	89116789	89117361	+	0	NA	intron (NM_001039169, intron 2 of 6)	intron (NM_001039169, intron 2 of 6)	6561	NM_001039169	26987	Mm.227183	NM_023314	ENSMUSG00000026254	Eif4e2	2700069E09Rik|AI036339|AV129531|D0H0S6743E|Eif4el3	eukaryotic translation initiation factor 4E member 2	protein-coding
common_peak2-26709-26-26-0.173011589994994-0.363124929330838	chr2	128567877	128568755	+	0	NA	intron (NM_008587, intron 4 of 18)	intron (NM_008587, intron 4 of 18)	43583	NM_008587	17289	Mm.239655	NM_008587	ENSMUSG00000014361	Mertk	Eyk|Mer|Nyk|nmf12	c-mer proto-oncogene tyrosine kinase	protein-coding
unique_peak1-496-8-0-3.00522241794757-2.70926996097583	chr1	179991685	179992204	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	70378	NM_001034899	545391	Mm.442974	NM_001034899	ENSMUSG00000091476	Gm16432	EG545391|EG666250	predicted gene 16432	protein-coding
unique_peak1-1466-9-1-2.18961340640422-2.31132995230379	chr12	110701332	110701836	+	0	NA	TTS (NM_001190705)	TTS (NM_001190705)	9919	NM_010052	13386	Mm.157069	NM_010052	ENSMUSG00000040856	Dlk1	AW742678|DLK-1|DlkI|FA1|Ly107|Peg9|SCP1|ZOG|pG2|pref-1	delta-like 1 homolog (Drosophila)	protein-coding
unique_peak1-3132-8-2-1.42025991722641-1.65811743852845	chr18	36356169	36356726	+	0	NA	exon (NM_001167891, exon 1 of 10)	exon (NM_001167891, exon 1 of 10)	367	NM_001167891	100042150	Mm.380390	NM_001167891	ENSMUSG00000060275	Nrg2	Don1|NTAK	neuregulin 2	protein-coding
unique_peak1-2270-16-1-3.11826364226806-4.46429741251234	chr15	78075875	78076705	+	0	NA	intron (NM_008677, intron 1 of 9)	intron (NM_008677, intron 1 of 9)	1049	NM_008677	17972	Mm.2068	NM_008677	ENSMUSG00000071715	Ncf4	AI451400|p40phox	neutrophil cytosolic factor 4	protein-coding
common_peak2-20790-23-23-0.136805003787924-0.340939137447793	chr10	121625470	121626433	+	0	NA	Intergenic	L1_Mus3|LINE|L1	69198	NR_027637	100043513	Mm.429141	NR_027637		Gm4489	Gm241	predicted gene 4489	ncRNA
common_peak1-9794-23-30--0.232428805877794-0.363124929330844	chr12	65036078	65036947	+	0	NA	Intergenic	Intergenic	539373	NM_001163271	623046	Mm.189552	NM_001163271	ENSMUSG00000043060	Fscb	EG623046	fibrous sheath CABYR binding protein	protein-coding
common_peak1-7535-67-91-0.0208495267259821-0.3057506808173	chr1	34842073	34843407	+	0	NA	Intergenic	B4A|SINE|B4	-15827	NM_183019	226970	Mm.41604	NM_183019	ENSMUSG00000037509	Arhgef4	9330140K16Rik|Asef|ENSMUSG00000070955	Rho guanine nucleotide exchange factor (GEF) 4	protein-coding
common_peak1-10504-20-28--0.369906210536379-0.457753417732779	chr14	59440826	59441757	+	0	NA	Intergenic	Intergenic	320439	NM_026461	67932	Mm.65550	NM_026461	ENSMUSG00000021977	1700129C05Rik	-	RIKEN cDNA 1700129C05 gene	protein-coding
unique_peak1-3160-11-5-0.923731083530457-1.477227296591	chr18	38068706	38069239	+	0	NA	intron (NM_007858, intron 1 of 26)	B1_Mus2|SINE|Alu	26093	NM_007858	13367	Mm.195916	NM_007858	ENSMUSG00000024456	Diap1	D18Wsu154e|Dia1|Diaph1|Drf1|mKIAA4062|p140mDia	diaphanous homolog 1 (Drosophila)	protein-coding
unique_peak2-39312-12-13--0.158578936969966-0.301029995663979	chr8	124520749	124521311	+	0	NA	exon (NM_001285983, exon 6 of 13)	exon (NM_001285983, exon 6 of 13)	19106	NR_106096	102466915		NR_106096		Mir7237	mmu-mir-7237	microRNA mir-7237	ncRNA
unique_peak1-7358-9-2-1.60465090568306-1.87199725847353	chrX	20418146	20418668	+	0	NA	Intergenic	CT-rich|Low_complexity|Low_complexity	-7262	NM_009703	11836	Mm.220946	NM_009703	ENSMUSG00000001127	Araf	1200013E08Rik|A-Raf|AW495444|Araf1	v-raf murine sarcoma 3611 viral oncogene homolog	protein-coding
unique_peak1-2370-8-1-2.00522241794757-2.05605744720049	chr15	94616352	94616874	+	0	NA	intron (NM_178789, intron 3 of 7)	intron (NM_178789, intron 3 of 7)	156997	NM_178789	320709	Mm.74873	NM_178789	ENSMUSG00000063296	Tmem117	B930062P21Rik	transmembrane protein 117	protein-coding
common_peak1-18115-18-16-0.225456309978012-0.397739447719379	chr8	3631087	3631903	+	0	NA	intron (NM_011503, intron 1 of 18)	intron (NM_011503, intron 1 of 18)	335	NM_011503	20911	Mm.7247	NM_011503	ENSMUSG00000004626	Stxbp2	C79054|Munc-18-2|Munc-18b|Munc18b|Sxtbp2|Sxtp2|Unc18-2|Unc18b|muSec1	syntaxin binding protein 2	protein-coding
unique_peak1-2908-5-0-2.29561966399415-1.80617997398389	chr17	46613548	46614066	+	0	NA	intron (NM_001162864, intron 8 of 14)	intron (NM_001162864, intron 8 of 14)	10817	NM_001162864	106763	Mm.297613	NM_175351	ENSMUSG00000015599	Ttbk1	AU017937|AW048023|C330008L01Rik	tau tubulin kinase 1	protein-coding
common_peak2-21931-26-54--0.853460621366198-1.81099027427052	chr12	24651246	24652054	+	0	NA	Intergenic	Intergenic	130484	NM_001256489	66808	Mm.379124	NM_001256489		9030624G23Rik	-	RIKEN cDNA 9030624G23 gene	protein-coding
common_peak2-24310-8-33--2.08224042330277-3.85480160428388	chr17	36257253	36257867	+	0	NA	exon (NM_010395, exon 3 of 12)	exon (NM_010395, exon 3 of 12)	820	NM_010395	15024	Mm.426031	NM_010395	ENSMUSG00000079491	H2-T10	H-2T10	histocompatibility 2, T region locus 10	protein-coding
common_peak2-31025-72-131--0.375810306486136-1.08684663692988	chr8	12756443	12758476	+	0	NA	intron (NR_121603, intron 1 of 29)	CpG	443	NM_001293667	50770	Mm.257837	NM_015804	ENSMUSG00000031441	Atp11a	4930558F19Rik|AU040868|Atpc1h|Ih	ATPase, class VI, type 11A	protein-coding
common_peak2-31995-20-24--0.155781405183531-0.319918318021793	chr9	70834167	70835109	+	0	NA	Intergenic	Intergenic	-52023	NM_008280	15450	Mm.390187	NM_008280	ENSMUSG00000032207	Lipc	AI256194|HL|Hpl	lipase, hepatic	protein-coding
common_peak1-16407-84-78-0.631153310711922-2.42030834784074	chr5	125393335	125395237	+	0	NA	Intergenic	RSINE1|SINE|B4	51211	NM_001081750	269704	Mm.138617	NM_001081750	ENSMUSG00000079215	Zfp664	AW060232|D930038J03Rik|ZFOC1|Znf664	zinc finger protein 664	protein-coding
common_peak1-17890-15-11-0.4272022498345-0.503257505534083	chr7	118928798	118929652	+	0	NA	Intergenic	Intergenic	-5734	NM_173739	233733	Mm.323322	NM_173739	ENSMUSG00000038296	Galnt18	2900011G21Rik|BC024988|Galntl4	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 18	protein-coding
common_peak1-17306-51-85--0.351340929099525-0.764984435653934	chr6	137734944	137736112	+	0	NA	intron (NM_172733, intron 5 of 8)	intron (NM_172733, intron 5 of 8)	32430	NM_172733	232449	Mm.29181	NM_172733	ENSMUSG00000030225	Dera	2010002D22Rik|2500002K03Rik|DEOC	2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	protein-coding
common_peak2-24192-13-5-1.19350952991661-1.95509489018123	chr16	57419375	57419789	+	0	NA	intron (NM_001040397, intron 1 of 4)	intron (NM_001040397, intron 1 of 4)	66192	NM_001040397	78749	Mm.328360	NM_001040397	ENSMUSG00000043336	Filip1l	4631422O05Rik|Doc1	filamin A interacting protein 1-like	protein-coding
common_peak1-12249-12-4-1.32684789020028-2.04196296489515	chr17	35969078	35969627	+	0	NA	intron (NM_008027, intron 12 of 12)	B1_Mur2|SINE|Alu	5894	NM_011655	22154	Mm.273538	NM_011655	ENSMUSG00000001525	Tubb5	AA408537|AI596182|B130022C14Rik|M(beta)5	tubulin, beta 5 class I	protein-coding
common_peak2-24190-40-45-0.135413726694085-0.382513308492823	chr16	56716367	56717422	+	0	NA	intron (NM_019678, intron 1 of 7)	intron (NM_019678, intron 1 of 7)	669	NM_001252443	21787	Mm.425970	NM_019678	ENSMUSG00000022757	Tfg	AI173908	Trk-fused gene	protein-coding
unique_peak1-1592-10-1-2.35641534500877-2.57096726280955	chr13	34211505	34212138	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-6680	NR_046184	432745	Mm.159104	NR_046184		4930447K03Rik	-	RIKEN cDNA 4930447K03 gene	ncRNA
unique_peak1-2383-9-1-2.18961340640422-2.31132995230379	chr15	96953714	96954291	+	0	NA	Intergenic	Intergenic	-67615	NM_027052	69354	Mm.250980	NM_027052	ENSMUSG00000022464	Slc38a4	1110012E16Rik|1700012A18Rik|Ata3|mATA3|mNAT3	solute carrier family 38, member 4	protein-coding
common_peak1-9911-14-29--1.00767443525087-1.28534286439185	chr12	87407351	87408015	+	0	NA	intron (NM_009368, intron 3 of 6)	intron (NM_009368, intron 3 of 6)	12308	NM_009368	21809	Mm.3992	NM_009368	ENSMUSG00000021253	Tgfb3	Tgfb-3	transforming growth factor, beta 3	protein-coding
common_peak2-31857-23-56--1.11112250965566-2.74059030423418	chr9	50616471	50617621	+	0	NA	intron (NR_045601, intron 12 of 13)	(GA)n|Simple_repeat|Simple_repeat	33716	NR_045601	102580	Mm.160035	NM_133981	ENSMUSG00000032059	Alg9	8230402H15Rik|AI747665|B430313H07Rik|Dibd1	asparagine-linked glycosylation 9 (alpha 1,2 mannosyltransferase)	protein-coding
unique_peak2-38472-0-5--3.42509343119537-1.32905871926422	chr7	29350004	29350355	+	0	NA	exon (NM_027470, exon 4 of 10)	exon (NM_027470, exon 4 of 10)	-4176	NR_106016	102466795		NR_106016		Mir7049	mmu-mir-7049	microRNA mir-7049	ncRNA
common_peak1-8798-47-73--0.274611940862402-0.534695158203301	chr11	20112166	20113925	+	0	NA	intron (NM_008996, intron 1 of 5)	PB1D10|SINE|Alu	11440	NM_008996	19324	Mm.271944	NM_008996	ENSMUSG00000020149	Rab1	Gtbp|Rab-1|Rab1A|Ypt1|mKIAA3012	RAB1, member RAS oncogene family	protein-coding
common_peak1-18599-14-17--0.270708841084668-0.328191099940267	chr8	106678156	106678811	+	0	NA	Intergenic	Lx6|LINE|L1	-15930	NM_001141924	65115	Mm.41849	NM_001141922	ENSMUSG00000031872	Bean1	Bean	brain expressed, associated with Nedd4, 1	protein-coding
common_peak1-12632-21-34--0.559793751678731-0.677299098039755	chr18	34624071	34625058	+	0	NA	intron (NM_146084, intron 9 of 20)	intron (NM_146084, intron 9 of 20)	41913	NM_146084	225358	Mm.226899	NM_146084	ENSMUSG00000036501	Fam13b	2610024E20Rik|AW060714|AW546153	family with sequence similarity 13, member B	protein-coding
unique_peak2-37831-1-6--2.43441193227435-1.56314192529759	chr5	130273494	130273836	+	0	NA	intron (NM_133900, intron 6 of 7)	ID_B1|SINE|B4	19464	NM_133900	100678	Mm.271784	NM_133900	ENSMUSG00000029446	Psph	AI480570|PSP|PSPase	phosphoserine phosphatase	protein-coding
common_peak2-26718-32-49--0.364764170555064-0.548322060310103	chr2	130423730	130425066	+	0	NA	intron (NM_001255993, intron 5 of 6)	intron (NM_001255993, intron 5 of 6)	-16121	NM_009732	11998	Mm.6190	NM_009732	ENSMUSG00000037727	Avp	Vp|Vsp	arginine vasopressin	protein-coding
common_peak2-31821-12-15--0.351224014912361-0.332077462497413	chr9	42263654	42264259	+	0	NA	intron (NM_173038, intron 1 of 7)	intron (NM_173038, intron 1 of 7)	16353	NM_173038	272589	Mm.34483	NM_173038	ENSMUSG00000037287	Tbcel	D330014K23|E130107N23Rik|Lrrc35	tubulin folding cofactor E-like	protein-coding
common_peak2-26533-36-38-0.193918867305506-0.429377759889511	chr2	91730145	91730844	+	0	NA	intron (NM_172669, intron 14 of 17)	B3|SINE|B2	-31852	NM_007699	12672	Mm.330405	NM_007699	ENSMUSG00000040495	Chrm4	Chrm-4|M4	cholinergic receptor, muscarinic 4	protein-coding
unique_peak2-36741-1-6--2.43441193227435-1.56314192529759	chr3	58163911	58164393	+	0	NA	Intergenic	B1F|SINE|Alu	-55459	NM_001081229	72033	Mm.218409	NM_028067	ENSMUSG00000027806	Tsc22d2	1810043J12Rik|5530402M19Rik	TSC22 domain family, member 2	protein-coding
unique_peak2-37811-2-6--1.72480917832092-1.26211192963361	chr5	123980313	123980658	+	0	NA	3' UTR (NM_029929, exon 13 of 13)	3' UTR (NM_029929, exon 13 of 13)	-6312	NM_023232	66593	Mm.46716	NM_023232	ENSMUSG00000029433	Diablo	0610041G12Rik|1700006L01Rik|AU040403|Smac	diablo homolog (Drosophila)	protein-coding
unique_peak2-37407-4-5--0.608423014574403-0.909929411522249	chr4	143978142	143978515	+	0	NA	Intergenic	RSINE1|SINE|B4	-10492	NM_001115077	627009	Mm.473686	NM_001115077	ENSMUSG00000073721	Gm13125	EG627009|OTTMUSG00000010547	predicted gene 13125	protein-coding
unique_peak2-38575-6-12--1.13504160776079-1.45089835786865	chr7	66580333	66580854	+	0	NA	Intergenic	Intergenic	-1074	NR_015479	330544	Mm.9002	NR_015479		C230091D08Rik	-	RIKEN cDNA C230091D08 gene	ncRNA
common_peak2-21293-16-24--0.525592547506663-0.561823156887258	chr11	70969370	70970047	+	0	NA	exon (NM_001040696, exon 14 of 15)	exon (NM_001040696, exon 14 of 15)	-11502	NM_001004142	195046	Mm.240227	NM_001004142		Nlrp1a	CARD7|DEFCAP|Gm14|Gm15|NAC|Nalp1|Nalp1a|Nlrp1|PP1044	NLR family, pyrin domain containing 1A	protein-coding
common_peak1-18064-34-41--0.0102488957774947-0.30364629078125	chr8	106168179	106169500	+	0	NA	intron (NR_045730, intron 3 of 4)	intron (NR_045730, intron 3 of 4)	41140	NR_045730	71058	Mm.67707	NR_045730		4933400L20Rik	-	RIKEN cDNA 4933400L20 gene	ncRNA
common_peak2-27758-43-50-0.110137843552208-0.352751277022878	chr3	127930189	127931691	+	0	NA	intron (NR_045704, intron 1 of 5)	intron (NR_045704, intron 1 of 5)	3583	NR_045704	402774	Mm.209170	NR_045704		D030025E07Rik	-	RIKEN cDNA D030025E07 gene	ncRNA
common_peak1-13007-21-18-0.32156175182265-0.48779450977742	chr19	4817484	4818190	+	0	NA	Intergenic	RMER16|LTR|ERVK	-6203	NM_019869	56275	Mm.276338	NM_019869	ENSMUSG00000006456	Rbm14	1300007E16Rik|PSP2|Sytip|p16|p16K	RNA binding motif protein 14	protein-coding
common_peak2-21949-48-54-0.189567437710155-0.451511310064814	chr12	31634049	31635233	+	0	NA	intron (NR_110343, intron 9 of 10)	Lx9|LINE|L1	38107	NM_013709	24057	Mm.218624	NM_013709	ENSMUSG00000020669	Sh3yl1	AI314953|Ray|YSC84	Sh3 domain YSC-like 1	protein-coding
common_peak2-19714-1-6--2.43441193227435-1.56314192529759	chr1	64809344	64809617	+	0	NA	Intergenic	MER2|DNA|MER2_type	-25156	NM_022721	14367	Mm.150813	NM_022721	ENSMUSG00000045005	Fzd5	5330434N09Rik|AI427138|Fz-5|Fz5|mFz5	frizzled homolog 5 (Drosophila)	protein-coding
common_peak2-31355-17-17-0.0483713367627256-0.325169893479371	chr8	84687364	84687970	+	0	NA	Intergenic	L1_Mus4|LINE|L1	238818	NM_001254747	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
unique_peak2-34471-9-11--0.395349094316936-0.344532117358383	chr14	31781128	31781673	+	0	NA	intron (NM_011849, intron 6 of 14)	RMER21A|LTR|ERV1	16726	NM_011849	23955	Mm.251494	NM_011849	ENSMUSG00000021918	Nek4	-	NIMA (never in mitosis gene a)-related expressed kinase 4	protein-coding
unique_peak1-3492-15-5-1.4272022498345-1.61682445937017	chr19	10974190	10974895	+	0	NA	intron (NM_134129, intron 6 of 15)	intron (NM_134129, intron 6 of 15)	1407	NM_001253844	28000	Mm.491104	NM_134129	ENSMUSG00000024735	Prpf19	AA617263|AL024362|D19Wsu55e|NMP200|PSO4|Prp19|Snev	PRP19/PSO4 pre-mRNA processing factor 19 homolog (S. cerevisiae)	protein-coding
common_peak2-19913-26-24-0.284042902383738-0.446094173747083	chr1	121327165	121328218	+	0	NA	Intergenic	Intergenic	-8866	NM_008381	16324	Mm.3092	NM_008381	ENSMUSG00000037035	Inhbb	-	inhibin beta-B	protein-coding
unique_peak2-39196-2-8--2.08737925770563-1.65811743852845	chr8	104408001	104408561	+	0	NA	Intergenic	Intergenic	900730	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
unique_peak2-39751-507-167-2.671490617688-160.048108995608	chrUn_JH584304	37894	42185	+	0	NA	NA	NA	NA	NA								
unique_peak1-3781-17-5-1.63333383748388-2.19184853030482	chr19	55798742	55799435	+	0	NA	Intergenic	PB1D10|SINE|Alu	-17212	NM_001142922	21416	Mm.139815	NM_009333	ENSMUSG00000024985	Tcf7l2	TCF4B|TCF4E|Tcf-4|Tcf4|mTcf-4B|mTcf-4E	transcription factor 7 like 2, T cell specific, HMG box	protein-coding
common_peak2-20727-6-7--0.434601889619698-0.97990265578305	chr10	99063038	99063483	+	0	NA	Intergenic	Intergenic	-8545	NR_038019	100504202	Mm.403801	NR_038019		Gm20110	-	predicted gene, 20110	ncRNA
unique_peak2-38041-3-5--0.998945590680433-0.96108193396963	chr6	38823827	38824250	+	0	NA	intron (NM_001294144, intron 1 of 14)	intron (NM_001294144, intron 1 of 14)	2151	NM_010433	15258	Mm.23790	NM_010433	ENSMUSG00000061436	Hipk2	1110014O20Rik|B230339E18Rik|Stank	homeodomain interacting protein kinase 2	protein-coding
unique_peak2-38173-8-7-0.00522241794757061-1.00793137938329	chr6	90703250	90703684	+	0	NA	intron (NM_001134384, intron 1 of 13)	intron (NM_001134384, intron 1 of 13)	-36944	NM_001134383	232227	Mm.196943	NM_182784	ENSMUSG00000034312	Iqsec1	AW561907|BC026481|BRAG2|D6Ertd349e|cI-43	IQ motif and Sec7 domain 1	protein-coding
unique_peak1-4395-13-0-3.77847203063777-4.51544993495972	chr2	165189702	165190424	+	0	NA	Intergenic	Intergenic	-2444	NM_001005425	381405	Mm.296323	NM_001005425	ENSMUSG00000056824	Zfp663	Gm1008	zinc finger protein 663	protein-coding
unique_peak2-34438-2-6--1.72480917832092-1.26211192963361	chr14	21271782	21272174	+	0	NA	promoter-TSS (NM_001163638)	promoter-TSS (NM_001163638)	-531	NM_001163639	76670	Mm.159759	NM_029698	ENSMUSG00000039543	Ttc18	-	tetratricopeptide repeat domain 18	protein-coding
common_peak1-10835-42-41-0.350011905088423-0.688538237251116	chr14	104521844	104523199	+	0	NA	Intergenic	L1Md_T|LINE|L1	-96162	NR_045953	73877	Mm.399172	NR_045953		4930432J09Rik	-	RIKEN cDNA 4930432J09 gene	ncRNA
common_peak2-27725-14-15--0.100783839642355-0.301029995663982	chr3	123071767	123072804	+	0	NA	3' UTR (NM_201638, exon 11 of 11)	3' UTR (NM_201638, exon 11 of 11)	16623	NM_201638	210529	Mm.260039	NM_201638	ENSMUSG00000028114	Mettl14	G430022H21Rik|mKIAA1627	methyltransferase like 14	protein-coding
common_peak2-23059-22-37--0.600643408356181-0.808568985218824	chr14	70577836	70578656	+	0	NA	promoter-TSS (NM_145978)	promoter-TSS (NM_145978)	-767	NM_145978	213019	Mm.283968	NM_145978	ENSMUSG00000022090	Pdlim2	4732462F18Rik|Slim	PDZ and LIM domain 2	protein-coding
unique_peak1-884-33-15-1.33133756252553-2.86150037395324	chr11	32344507	32345623	+	0	NA	Intergenic	Intergenic	-10307	NM_173784	327900	Mm.260956	NM_173784		Ubtd2	4930571L24|9630054F20Rik|AI645720	ubiquitin domain containing 2	protein-coding
common_peak1-12464-29-35--0.0576349208272013-0.301029995663967	chr17	84073490	84074575	+	0	NA	Intergenic	L1M2|LINE|L1	-31471	NM_001171054	116871	Mm.277668	NM_054082	ENSMUSG00000055817	Mta3	1110002J22Rik|mKIAA1266	metastasis associated 3	protein-coding
common_peak2-25594-19-10-0.943255708024389-1.16735254179725	chr19	8723534	8724022	+	0	NA	Intergenic	L1M5|LINE|L1	14047	NR_045314	402757	Mm.150255	NR_045314		9830166K06Rik	-	RIKEN cDNA 9830166K06 gene	ncRNA
unique_peak1-6332-17-8-1.04837133676273-1.30305656033811	chr7	47052081	47052802	+	0	NA	Intergenic	Intergenic	279305	NM_001004139	70227	Mm.333800	NM_001004139	ENSMUSG00000068959	Zfp619	3000002G13Rik	zinc finger protein 619	protein-coding
common_peak1-8225-47-104--0.779404092899575-2.7627157076563	chr10	11280309	11282128	+	0	NA	Intergenic	Intergenic	217975	NM_010146	13853	Mm.89946	NM_010146		Epm2a	TG-B|Tg(TcraK,TcrbK)TG-BFlv	epilepsy, progressive myoclonic epilepsy, type 2 gene alpha	protein-coding
common_peak2-28523-34-27-0.574713604943662-1.01480426461253	chr5	108461130	108462289	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-32984	NM_001253880	17765	Mm.257149	NM_013827	ENSMUSG00000029267	Mtf2	9230112N11Rik|AA537621|C76717|M96|Pcl2	metal response element binding transcription factor 2	protein-coding
unique_peak2-34120-6-7--0.434601889619698-0.97990265578305	chr13	21779691	21780114	+	0	NA	Intergenic	L1Md_T|LINE|L1	-13053	NM_146543	258536	Mm.223076	NM_146543	ENSMUSG00000094398	Olfr1360	MOR256-10|MOR256-35	olfactory receptor 1360	protein-coding
common_peak1-18574-106-133-0.271677664547947-0.921084607508908	chr8	105636410	105637841	+	0	NA	Intergenic	(TTCC)n|Simple_repeat|Simple_repeat	234309	NR_036588	69794	Mm.396139	NR_036588		1600027J07Rik	-	RIKEN cDNA 1600027J07 gene	ncRNA
common_peak2-20093-11-9-0.186765489364251-0.344532117358383	chr1	156620330	156620827	+	0	NA	Intergenic	MTB|LTR|MaLR	-47528	NM_009782	12290	Mm.267517	NM_009782	ENSMUSG00000004110	Cacna1e	A430040I15|BII|Cach6|Cacnl1a6|Cav2.3|Cchra1|alpha1E	calcium channel, voltage-dependent, R type, alpha 1E subunit	protein-coding
common_peak2-29265-20-46--1.06651406708644-2.18062287223157	chr5	140829757	140830490	+	0	NA	intron (NM_172277, intron 4 of 10)	intron (NM_172277, intron 4 of 10)	22247	NM_008637	17766	Mm.118846	NM_008637	ENSMUSG00000036639	Nudt1	Mth1	nudix (nucleoside diphosphate linked moiety X)-type motif 1	protein-coding
unique_peak1-1738-10-1-2.35641534500877-2.57096726280955	chr13	101801505	101801990	+	0	NA	Intergenic	Intergenic	-198365	NM_022885	69048	Mm.402215	NM_022885	ENSMUSG00000021629	Slc30a5	1810010K08Rik|AF233321|ZNT5|ZTL1|ZnT-5|Zntl1	solute carrier family 30 (zinc transporter), member 5	protein-coding
common_peak2-23300-15-9-0.690236655668294-0.732381977911291	chr15	35025333	35025884	+	0	NA	intron (NM_019635, intron 4 of 10)	intron (NM_019635, intron 4 of 10)	59953	NM_019635	56274	Mm.262330	NM_019635	ENSMUSG00000022329	Stk3	0610042I06Rik|MST|Mst2|Mst3|Ste20|mess1	serine/threonine kinase 3	protein-coding
unique_peak2-36702-8-25--1.69521730019352-2.29727994934156	chr3	41082279	41082989	+	0	NA	Intergenic	Intergenic	-195666	NM_027558	70804	Mm.40321	NM_027558	ENSMUSG00000049940	Pgrmc2	4631434O19Rik|5730409G06Rik|DG6|PMBP	progesterone receptor membrane component 2	protein-coding
common_peak1-16847-40-45-0.135413726694085-0.382513308492823	chr6	54038512	54040236	+	0	NA	intron (NM_001163640, intron 1 of 12)	intron (NM_001163640, intron 1 of 12)	49448	NM_001163640	69993	Mm.321147	NM_023543	ENSMUSG00000004633	Chn2	1700026N20Rik|4930557O16Rik|ARHGAP3|Bch	chimerin 2	protein-coding
common_peak2-23932-40-25-0.958535964610006-2.27205585058211	chr16	11202672	11203512	+	0	NA	promoter-TSS (NR_038156)	promoter-TSS (NR_038156)	293	NM_025546	66409	Mm.28291	NM_025546	ENSMUSG00000005846	Rsl1d1	2410005K20Rik|C76439|pBK1	ribosomal L1 domain containing 1	protein-coding
common_peak2-26710-50-43-0.581508697841655-1.3628545831955	chr2	128686816	128687596	+	0	NA	Intergenic	MTEa|LTR|MaLR	-2462	NM_024237	70370	Mm.5107	NM_024237	ENSMUSG00000027386	Fbln7	1600015H20Rik|AI464334|TM14	fibulin 7	protein-coding
common_peak2-24258-7-9--0.522837264589173-1.05908390183068	chr16	92686176	92686581	+	0	NA	intron (NM_001111022, intron 4 of 6)	intron (NM_001111022, intron 4 of 6)	11196	NM_001111023	12394	Mm.4081	NM_009821	ENSMUSG00000022952	Runx1	AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b	runt related transcription factor 1	protein-coding
common_peak2-31813-74-107--0.0390009251848609-0.305127174193636	chr9	40799844	40800923	+	0	NA	intron (NM_019465, intron 3 of 9)	intron (NM_019465, intron 3 of 9)	12328	NM_001281954	54698	Mm.42791	NM_019465	ENSMUSG00000032021	Crtam	-	cytotoxic and regulatory T cell molecule	protein-coding
common_peak2-27846-45-86--0.582585470503856-1.49084094315847	chr3	152265255	152266345	+	0	NA	intron (NM_001081277, intron 6 of 13)	intron (NM_001081277, intron 6 of 13)	-64077	NR_040386	99542	Mm.394921	NR_040386	ENSMUSG00000097745	AI115009	-	expressed sequence AI115009	ncRNA
common_peak1-10900-58-77-0.0105477160282481-0.306598026174992	chr15	102202530	102204568	+	0	NA	Intergenic	Intergenic	-6847	NM_130458	170574	Mm.263284	NM_130458		Sp7	6430578P22Rik|C22|Osx	Sp7 transcription factor 7	protein-coding
common_peak2-22225-63-104--0.275932926595533-0.630028288061319	chr12	116279899	116282048	+	0	NA	Intergenic	RLTR9A|LTR|ERVK	-529068	NR_106063	102465664		NR_106063	miRBase:MI0022945	Mir7094-2	mmu-mir-7094-2	microRNA mir-7094-2	ncRNA
common_peak2-27911-83-115-0.0562416299785546-0.334157720374157	chr4	6453258	6454463	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-72442	NM_010945	18201	Mm.3059	NM_010945	ENSMUSG00000028245	Nsmaf	AA959567|C630007J05|Fan	neutral sphingomyelinase (N-SMase) activation associated factor	protein-coding
common_peak2-28643-44-57--0.0360881605590366-0.301029995664025	chr5	30154408	30155694	+	0	NA	intron (NR_105781, intron 1 of 2)	L1_Mus3|LINE|L1	39500	NR_105781	102465962		NR_105781	miRBase:MI0021891	Mir6362	mmu-mir-6362	microRNA mir-6362	ncRNA
common_peak2-29479-8-6-0.197867495889966-1.03789460276074	chr6	31076742	31077056	+	0	NA	intron (NR_110471, intron 3 of 3)	intron (NR_110471, intron 3 of 3)	-63806	NR_029532	387223		NR_029532	miRBase:MI0000143	Mir29b-1	Mirn29b|Mirn29b-1	microRNA 29b-1	ncRNA
common_peak2-25785-14-13-0.0918612383000403-0.332077462497413	chr19	34607554	34608058	+	0	NA	Intergenic	RMER13B|LTR|ERVK	-5842	NM_021460	16889	Mm.157545	NM_021460	ENSMUSG00000024781	Lipa	AA960673|Lal|Lip-1|Lip1	lysosomal acid lipase A	protein-coding
common_peak1-7918-13-25--0.921967687503323-0.983972868822056	chr1	138619151	138619667	+	0	NA	intron (NR_037986, intron 2 of 4)	B1_Mus1|SINE|Alu	26621	NR_037986	100503474	Mm.428276	NR_037986		Gm16880	-	predicted gene, 16880	ncRNA
common_peak2-32022-13-14--0.12841856497075-0.301029995663977	chr9	75441182	75441886	+	0	NA	intron (NM_001038710, intron 3 of 9)	intron (NM_001038710, intron 3 of 9)	5406	NM_001038710	50876	Mm.291880	NM_016711	ENSMUSG00000032186	Tmod2	N-Tmod|NTMOD	tropomodulin 2	protein-coding
unique_peak1-2036-7-5-0.214128329577033-1.01466476204226	chr15	25436188	25436654	+	0	NA	Intergenic	Intergenic	92474	NR_027376	432939	Mm.146555	NM_001013791		Gm5468	100040583|EG432939	predicted gene 5468	ncRNA
common_peak1-12651-84-95-0.349971558167869-1.03241865437677	chr18	35771147	35772769	+	0	NA	intron (NM_026420, intron 2 of 3)	intron (NM_026420, intron 2 of 3)	13637	NM_026420	67869	Mm.126534	NM_026420	ENSMUSG00000037058	Paip2	2310050K10Rik|AU045972	polyadenylate-binding protein-interacting protein 2	protein-coding
unique_peak1-1782-8-6-0.197867495889966-1.03789460276074	chr14	7898887	7899405	+	0	NA	Intergenic	Intergenic	38825	NM_001024712	100042149	Mm.396155	NM_001024712	ENSMUSG00000092167	Gm3696	544988|ENSMUSG00000056940|Gm10014	predicted gene 3696	protein-coding
unique_peak1-5029-10-3-1.35641534500877-1.75805390616669	chr4	130917669	130918207	+	0	NA	Intergenic	RMER17C|LTR|ERVK	417638	NM_010769	17180	Mm.271796	NM_010769	ENSMUSG00000040533	Matn1	CMP|Crtm|Mat1|matrilin-1	matrilin 1, cartilage matrix protein	protein-coding
common_peak1-9574-15-14-0.105274154947137-0.330004445983672	chr11	118290398	118290972	+	0	NA	intron (NM_001204129, intron 1 of 3)	intron (NM_001204129, intron 1 of 3)	914	NM_001204129	56745	Mm.23845	NM_019959		C1qtnf1	1600017K21Rik|CTRP1|Zsig37	C1q and tumor necrosis factor related protein 1	protein-coding
common_peak2-25177-23-16-0.634304663258741-0.82304638657543	chr18	54990158	54990820	+	0	NA	Intergenic	MER5A|DNA|MER1_type	159345	NM_175751	269023	Mm.192984	NM_175751	ENSMUSG00000052713	Zfp608	4932417D18Rik|D430007A19Rik|Znf608	zinc finger protein 608	protein-coding
common_peak2-27956-23-41--0.67054991826968-1.0364730969458	chr4	40142405	40143987	+	0	NA	intron (NM_007386, intron 19 of 20)	intron (NM_007386, intron 19 of 20)	43662	NM_172689	230073	Mm.86382	NM_172689		Ddx58	6430573D20Rik|C330021E21|RIG-I|RLR-1	DEAD (Asp-Glu-Ala-Asp) box polypeptide 58	protein-coding
common_peak1-14836-72-25-1.96814409473123-11.1744846200996	chr3	93537338	93540034	+	0	NA	Intergenic	RLTR14-int|LTR|ERV1	-58481	NM_148949	207213	Mm.425165	NM_148949	ENSMUSG00000094084	Tdpoz1	2cpoz56|Mapp2|Spopl1	TD and POZ domain containing 1	protein-coding
common_peak1-16062-57-66-0.199943849621157-0.484951602153905	chr5	45856544	45858086	+	0	NA	Intergenic	Intergenic	12325	NM_001163317	624224	Mm.475609	NM_001163317	ENSMUSG00000049530	Clrn2	EG624224	clarin 2	protein-coding
common_peak1-13570-10-7-0.356415345008769-1.12966497611638	chr2	9955676	9956236	+	0	NA	intron (NM_027748, intron 2 of 6)	intron (NM_027748, intron 2 of 6)	14280	NM_027748	209361	Mm.86343	NM_027748	ENSMUSG00000025782	Taf3	140kDa|4933439M23Rik|AW539625|TAF140|TAFII-140|TAFII140|mTAFII140	TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor	protein-coding
common_peak1-15579-16-19--0.203664452619301-0.325169893479371	chr4	127353748	127354628	+	0	NA	Intergenic	B4A|SINE|B4	293897	NM_001134733	635169	Mm.346755	NM_001134733	ENSMUSG00000028813	CK137956	-	cDNA sequence CK137956	protein-coding
common_peak2-28386-13-11-0.193509529916613-0.379391706698377	chr4	139232926	139233519	+	0	NA	Intergenic	Intergenic	23769	NM_031873	83770	Mm.190612	NM_031873	ENSMUSG00000028738	Tas1r2	Gpr71|T1r2|TR2	taste receptor, type 1, member 2	protein-coding
unique_peak2-34354-3-6--1.22133801201688-1.08602067057793	chr13	101481704	101482099	+	0	NA	intron (NM_009874, intron 7 of 11)	B1_Mm|SINE|Alu	18996	NM_009874	12572	Mm.259718	NM_009874	ENSMUSG00000069089	Cdk7	AI323415|AI528512|C230069N13|Cdkn7|Crk4	cyclin-dependent kinase 7	protein-coding
unique_peak1-3724-9-6-0.382258484346616-1.11707584880836	chr19	46457698	46458214	+	0	NA	intron (NM_016860, intron 4 of 10)	intron (NM_016860, intron 4 of 10)	12269	NM_016860	54130	Mm.3118	NM_016860	ENSMUSG00000025228	Actr1a	Arp1|alpha-Arp1	ARP1 actin-related protein 1A, centractin alpha	protein-coding
common_peak1-14291-11-7-0.508693584251613-1.21681515183528	chr2	157567334	157567838	+	0	NA	intron (NM_025680, intron 1 of 15)	intron (NM_025680, intron 1 of 15)	4449	NM_025680	66642	Mm.45193	NM_025680	ENSMUSG00000027649	Ctnnbl1	5730471K09Rik|NAP|NYD-SP19|P14L	catenin, beta like 1	protein-coding
common_peak2-19520-22-17-0.477359103645092-0.633951497070961	chr1	181009870	181010772	+	0	NA	intron (NM_027188, intron 8 of 11)	intron (NM_027188, intron 8 of 11)	437813	NM_027188	69726	Mm.222338	NM_027188		Smyd3	2410008A19Rik|Zmynd1	SET and MYND domain containing 3	protein-coding
common_peak2-22372-16-22--0.405298313788951-0.440610794044987	chr13	29855080	29855671	+	0	NA	intron (NM_144536, intron 5 of 15)	MTE-int|LTR|MaLR	92082	NM_144536	68916	Mm.212227	NM_144536	ENSMUSG00000006191	Cdkal1	1190005B03Rik|6620401C13Rik	CDK5 regulatory subunit associated protein 1-like 1	protein-coding
unique_peak1-238-9-4-0.867685311516858-1.36011389749466	chr1	90230624	90231050	+	0	NA	intron (NM_134252, intron 9 of 26)	L1_Rod|LINE|L1	27550	NM_134252	171382	Mm.218753	NM_134252	ENSMUSG00000036251	Trpm8	CMR1|LTRPC6|LTrpC-6|TRPP8|Trp-p8	transient receptor potential cation channel, subfamily M, member 8	protein-coding
common_peak1-7638-12-8-0.478850983645327-0.562038191119709	chr1	66700791	66701532	+	0	NA	exon (NM_175510, exon 51 of 65)	exon (NM_175510, exon 51 of 65)	-46306	NM_025683	66646	Mm.240912	NM_025683	ENSMUSG00000026005	Rpe	2810429B02Rik|5730518J08Rik	ribulose-5-phosphate-3-epimerase	protein-coding
unique_peak2-38813-5-20--2.09669775878461-2.39372960542229	chr7	134224347	134225108	+	0	NA	Intergenic	RLTR21|LTR|ERVK	-10223	NM_178901	101602	Mm.490357	NM_178901	ENSMUSG00000045165	AI467606	-	expressed sequence AI467606	protein-coding
unique_peak1-1055-8-2-1.42025991722641-1.65811743852845	chr11	79454765	79455295	+	0	NA	intron (NM_175543, intron 3 of 14)	L2c|LINE|L2	-18365	NR_003283	790912	Mm.447313	NR_003283	ENSMUSG00000087434	Rab11fip4os1	Gm11202|OTTMUSG00000000185	RAB11 family interacting protein 4 (class II), opposite strand 1	ncRNA
common_peak1-8173-53-97--0.47373683169928-1.17831092014798	chr10	120978452	120979975	+	0	NA	Intergenic	B3|SINE|B2	44637	NM_019786	56480	Mm.34580	NM_019786	ENSMUSG00000020115	Tbk1	1200008B05Rik|AI462036|AW048562	TANK-binding kinase 1	protein-coding
common_peak1-7622-224-327-0.281011246571417-1.85412071837263	chr1	63112771	63114678	+	0	NA	intron (NM_001114609, intron 8 of 11)	intron (NM_001114609, intron 8 of 11)	47117	NM_001081436	227195	Mm.74718	NM_001081436	ENSMUSG00000040865	Ino80d	7330405I11|A430093A21Rik|BC010584|OTTMUSG00000002594	INO80 complex subunit D	protein-coding
common_peak1-17056-26-13-1.12054417010086-1.80107744087171	chr6	97354824	97355881	+	0	NA	intron (NM_145148, intron 5 of 23)	intron (NM_145148, intron 5 of 23)	-152578	NM_001081157	320502	Mm.68163	NM_001081157	ENSMUSG00000044086	Lmod3	5430424A14Rik	leiomodin 3 (fetal)	protein-coding
unique_peak1-7386-11-1-2.50869358425161-2.83420869758413	chrX	75990826	75991492	+	0	NA	Intergenic	IAPEy-int|LTR|ERVK	8057	NM_001164739	70864	Mm.66681	NM_001164739	ENSMUSG00000078315	Fam47c	4921509A18Rik|Fam47a|Fam47a-ps	family with sequence similarity 47, member C	protein-coding
common_peak2-19653-119-214--0.209754928459416-0.726986851330858	chr1	46852441	46854579	+	0	NA	Intergenic	Intergenic	56844	NM_172653	227059	Mm.233889	NM_172653	ENSMUSG00000025986	Slc39a10	2900042E17Rik|5430433I10|mKIAA1265	solute carrier family 39 (zinc transporter), member 10	protein-coding
common_peak1-12586-11-8-0.338768582809301-1.14218153353838	chr18	20558006	20558398	+	0	NA	intron (NM_181682, intron 11 of 14)	intron (NM_181682, intron 11 of 14)	22866	NM_181682	225256	Mm.269128	NM_181682	ENSMUSG00000061928	Dsg1b	Dsg5	desmoglein 1 beta	protein-coding
unique_peak1-5121-8-1-2.00522241794757-2.05605744720049	chr5	65994410	65994906	+	0	NA	Intergenic	MT-int|LTR|MaLR	66158	NM_016786	53323	Mm.319512	NM_016786	ENSMUSG00000029203	Ube2k	AW492011|D5Ertd601e|E2-25k|Hip2|Hypg|Lig	ubiquitin-conjugating enzyme E2K	protein-coding
unique_peak1-7314-11-2-1.92373108353046-2.32232533660526	chr9	119740751	119741341	+	0	NA	Intergenic	Intergenic	-6472	NM_011887	24046	Mm.89981	NM_011887	ENSMUSG00000034115	Scn11a	NSS2|NaN|NaT|NaV1.9|SNS2	sodium channel, voltage-gated, type XI, alpha	protein-coding
common_peak2-26397-11-11--0.0762689164695427-0.301029995663976	chr2	57124290	57124697	+	0	NA	intron (NM_010274, intron 2 of 16)	ID4|SINE|ID	33700	NM_010274	14571	Mm.3711	NM_010274	ENSMUSG00000026827	Gpd2	AA408484|AI448216|AU021455|AW494132|GPDH|Gdm1|Gpd-m|Gpdh-m|TISP38	glycerol phosphate dehydrogenase 2, mitochondrial	protein-coding
common_peak1-19122-72-59-0.761693217263799-2.8253794630392	chr9	77749822	77751314	+	0	NA	Intergenic	B4|SINE|B4	-14604	NM_134255	68801	Mm.430736	NM_134255	ENSMUSG00000032349	Elovl5	1110059L23Rik|AI747313|AU043003|HELO1	ELOVL family member 5, elongation of long chain fatty acids (yeast)	protein-coding
common_peak1-11402-54-71-0.00316076018742173-0.302548520215158	chr15	98608588	98610333	+	0	NA	promoter-TSS (NM_011718)	promoter-TSS (NM_011718)	-879	NM_011718	22410	Mm.4709	NM_011718	ENSMUSG00000022996	Wnt10b	Wnt12	wingless-type MMTV integration site family, member 10B	protein-coding
common_peak1-16926-17-14-0.311405742596519-0.466170754204149	chr6	83023930	83024729	+	0	NA	Intergenic	Intergenic	-4055	NM_197992	69837	Mm.12261	NM_197992	ENSMUSG00000069678	Pcgf1	2010002K04Rik|AU024121|Nspc1	polycomb group ring finger 1	protein-coding
common_peak1-13803-81-167--0.520267819770195-2.22253669682327	chr2	45109254	45110780	+	0	NA	Intergenic	Intergenic	-141218	NM_015753	24136	Mm.440702	NM_015753	ENSMUSG00000026872	Zeb2	9130203F04Rik|D130016B08Rik|SIP1|Zfhx1b|Zfx1b|Zfxh1b	zinc finger E-box binding homeobox 2	protein-coding
unique_peak1-6342-7-2-1.21412832957703-1.45399745587252	chr7	51724403	51724892	+	0	NA	intron (NM_001205073, intron 2 of 4)	intron (NM_001205073, intron 2 of 4)	-1070	NR_106019	102465637		NR_106019		Mir7052	mmu-mir-7052	microRNA mir-7052	ncRNA
unique_peak2-34673-3-7--1.41398308995928-1.23214870625617	chr15	5555077	5555658	+	0	NA	Intergenic	ID_B1|SINE|B4	109049	NR_045274	71432	Mm.291087	NR_045274		5430437J10Rik	-	RIKEN cDNA 5430437J10 gene	ncRNA
common_peak1-18785-23-33--0.365695336741259-0.481798116163913	chr9	108002629	108003389	+	0	NA	intron (NM_007567, intron 11 of 11)	RSINE1|SINE|B4	-6198	NM_146226	235606	Mm.219639	NM_146226	ENSMUSG00000032590	Apeh	-	acylpeptide hydrolase	protein-coding
common_peak1-18184-10-10--0.103016273628528-0.301029995663987	chr8	18898622	18899264	+	0	NA	Intergenic	Intergenic	51928	NM_001286469	319581	Mm.111354	NM_176951	ENSMUSG00000039814	Xkr5	5430438H03Rik|XRG5	X Kell blood group precursor-related family, member 5	protein-coding
unique_peak2-36792-5-8--0.874305337448166-1.10484139239135	chr3	80913200	80913674	+	0	NA	intron (NM_019971, intron 1 of 5)	Lx9|LINE|L1	73099	NM_019971	54635	Mm.331089	NM_019971	ENSMUSG00000028019	Pdgfc	1110064L01Rik|AI647969|PDGF-C	platelet-derived growth factor, C polypeptide	protein-coding
common_peak1-15712-12-6-0.841421063030034-1.58711810488664	chr4	141147279	141147825	+	0	NA	intron (NM_133754, intron 3 of 8)	L1_Rod|LINE|L1	8287	NM_001163256	74202	Mm.490327	NM_133754	ENSMUSG00000006219	Fblim1	2410043F08Rik|Cal|Fblp1|Gt10|migfilin|migfilin(s)	filamin binding LIM protein 1	protein-coding
common_peak2-26676-16-24--0.525592547506663-0.561823156887258	chr2	122737756	122738471	+	0	NA	Intergenic	RLTR13A|LTR|ERVK	130378	NM_021507	59010	Mm.28986	NM_021507	ENSMUSG00000005803	Sqrdl	0610039J17Rik|4930557M22Rik	sulfide quinone reductase-like (yeast)	protein-coding
unique_peak2-38004-5-8--0.874305337448166-1.10484139239135	chr6	29985164	29985606	+	0	NA	Intergenic	ID_B1|SINE|B4	-12603	NM_010938	18181	Mm.259258	NM_010938	ENSMUSG00000058440	Nrf1	C87038|D6Ertd415e	nuclear respiratory factor 1	protein-coding
common_peak1-17657-9-9--0.132314688483142-1.03275496310833	chr7	62419519	62420190	+	0	NA	intron (NM_178705, intron 5 of 11)	L1_Mur3|LINE|L1	329239	NM_178705	233271	Mm.387344	NM_178705		Luzp2	9330154K17Rik|D130073E01	leucine zipper protein 2	protein-coding
common_peak1-15493-15-19--0.309763344331706-0.356936432242222	chr4	109665543	109666194	+	0	NA	Intergenic	MTD-int|LTR|MaLR	15238	NM_172296	242620	Mm.32825	NM_172296	ENSMUSG00000047143	Dmrta2	Dmrt5	doublesex and mab-3 related transcription factor like family A2	protein-coding
unique_peak2-39565-2-7--1.91745425626332-1.45399745587252	chr9	70910169	70910483	+	0	NA	Intergenic	Intergenic	100114	NM_001271843	64008	Mm.449427	NM_022026	ENSMUSG00000032204	Aqp9	1700020I22Rik|AI266899|AQP-9	aquaporin 9	protein-coding
common_peak2-31448-23-42--0.704497250193017-1.12624088074372	chr8	104533836	104534719	+	0	NA	Intergenic	RLTR20B3|LTR|ERVK	774734	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
common_peak2-25038-9-15--0.81038659359578-0.630231561310125	chr18	30272799	30273324	+	0	NA	Intergenic	Intergenic	-159489	NM_181414	225326	Mm.194127	NM_181414	ENSMUSG00000033628	Pik3c3	5330434F23Rik|Vps34	phosphoinositide-3-kinase, class 3	protein-coding
unique_peak2-37035-6-7--0.434601889619698-0.97990265578305	chr3	131522737	131523221	+	0	NA	Intergenic	Intergenic	-225277	NM_020265	56811	Mm.103593	NM_020265	ENSMUSG00000028031	Dkk2	-	dickkopf homolog 2 (Xenopus laevis)	protein-coding
common_peak1-8941-11-21--0.950738034385684-0.991115276827166	chr11	53763123	53763729	+	0	NA	TTS (NM_019723)	TTS (NM_019723)	30103	NM_019723	56517	Mm.154284	NM_019723	ENSMUSG00000063652	Slc22a21	Octn3|Slc22a9	solute carrier family 22 (organic cation transporter), member 21	protein-coding
common_peak2-29210-6-6--0.241956811677302-0.947717972411649	chr5	137081113	137081512	+	0	NA	Intergenic	Intergenic	-37952	NM_001291238	13047	Mm.320317	NM_009986	ENSMUSG00000029705	Cux1	CDP|Cutl1|Cux|Cux-1	cut-like homeobox 1	protein-coding
common_peak2-31711-8-6-0.197867495889966-1.03789460276074	chr9	88522445	88522886	+	0	NA	Intergenic	MuRRS-int|LTR|ERV1	-28584	NR_040766	320692	Mm.427378	NR_040766	ENSMUSG00000097073	9430037G07Rik	-	RIKEN cDNA 9430037G07 gene	ncRNA
common_peak1-10595-66-47-0.933521163704685-3.52222159640796	chr14	31250692	31252337	+	0	NA	intron (NM_028981, intron 1 of 46)	intron (NM_028981, intron 1 of 46)	-41237	NM_133761	75901	Mm.28733	NM_133761	ENSMUSG00000021962	Dcp1a	1110066A22Rik|4930568L04Rik|AU019772|D14Ertd817e|Mitc1|SMIF	DCP1 decapping enzyme homolog A (S. cerevisiae)	protein-coding
common_peak2-32239-117-184--0.0223576053683487-0.303403201365231	chr9	124423125	124426305	+	0	NA	Intergenic	Intergenic	388433	NM_009917	12774	Mm.14302	NM_009917	ENSMUSG00000079227	Ccr5	AM4-7|CD195|Cmkbr5	chemokine (C-C motif) receptor 5	protein-coding
common_peak1-18528-22-27--0.160070816970199-0.317737750275047	chr8	94098051	94099153	+	0	NA	intron (NM_011936, intron 8 of 8)	intron (NM_011936, intron 8 of 8)	226951	NM_001253822	16373	Mm.238044	NM_008393	ENSMUSG00000031734	Irx3	AI894186	Iroquois related homeobox 3	protein-coding
common_peak1-17495-19-26--0.352200175501782-0.416752705545949	chr7	25237152	25238013	+	0	NA	Intergenic	ID_B1|SINE|B4	-6881	NM_199013	210145	Mm.33811	NM_199013	ENSMUSG00000062028	Irgc1	F630044M05Rik|Gm1102|Gm474|Ifgge|Iigp5|Irgc	immunity-related GTPase family, cinema 1	protein-coding
common_peak1-9605-63-57-0.580331595943018-1.66819226071312	chr11	120436787	120437954	+	0	NA	Intergenic	Intergenic	-3120	NM_011032	18453	Mm.16660	NM_011032	ENSMUSG00000025130	P4hb	ERp59|PDI|Pdia1|Thbp	prolyl 4-hydroxylase, beta polypeptide	protein-coding
common_peak2-27970-14-15--0.100783839642355-0.301029995663982	chr4	41755422	41756331	+	0	NA	Intergenic	Intergenic	-7418	NR_033506	100042539	Mm.418556	NR_033506		Gm3893	-	predicted gene 3893	ncRNA
common_peak1-15358-81-96-0.272136760821438-0.751347735740338	chr4	57797002	57799698	+	0	NA	Intergenic	Lx6|LINE|L1	-59770	NM_009649	11641	Mm.467752	NM_009649	ENSMUSG00000038729	Akap2	AA959716|AI649048|Akap-2|Akap-kl|B230340M18Rik|Prka2	A kinase (PRKA) anchor protein 2	protein-coding
common_peak1-9195-30-25-0.469235691350781-0.734130039933318	chr11	80080220	80081608	+	0	NA	3' UTR (NM_021536, exon 19 of 19)	3' UTR (NM_021536, exon 19 of 19)	-33500	NM_139228	246104	Mm.194148	NM_139228	ENSMUSG00000017692	Rhbdl3	AI847581|Rhbdl4|Rhomr1|Vrho	rhomboid, veinlet-like 3 (Drosophila)	protein-coding
unique_peak1-1177-16-4-1.7963355473807-2.18192634393779	chr11	100389863	100390699	+	0	NA	promoter-TSS (NM_134037)	promoter-TSS (NM_134037)	-967	NM_001199296	104112	Mm.282039	NM_134037	ENSMUSG00000020917	Acly	A730098H14Rik|AW538652	ATP citrate lyase	protein-coding
common_peak1-8262-22-13-0.8399291830298-1.1381569562463	chr10	22148860	22149728	+	0	NA	Intergenic	Intergenic	26675	NR_028580	100038752	Mm.392859	NR_028580	ENSMUSG00000096937	Gm10825	ENSMUSG00000075295	predicted gene 10825	ncRNA
common_peak1-17331-64-109--0.315913311816057-0.788056012377237	chr6	146887699	146889674	+	0	NA	intron (NM_001170433, intron 2 of 27)	L1ME3A|LINE|L1	14257	NM_001164236	73344	Mm.391543	NM_028509	ENSMUSG00000040163	1700034J05Rik	-	RIKEN cDNA 1700034J05 gene	protein-coding
common_peak2-23769-42-36-0.532875962238234-1.0880568139457	chr15	98662312	98663084	+	0	NA	promoter-TSS (NM_016781)	promoter-TSS (NM_016781)	-759	NM_016781	19082	Mm.6670	NM_016781	ENSMUSG00000067713	Prkag1	AA571379|BB036179|Prkaac	protein kinase, AMP-activated, gamma 1 non-catalytic subunit	protein-coding
unique_peak1-2425-13-1-2.77847203063777-3.64038867156802	chr15	101165714	101166192	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-33830	NR_035462	100316694		NR_035462	miRBase:MI0009930	Mir1941	mmu-mir-1941	microRNA 1941	ncRNA
common_peak1-10690-16-13-0.310908720210457-0.417187467413082	chr14	55014469	55015145	+	0	NA	intron (NM_001253680, intron 2 of 9)	intron (NM_001253680, intron 2 of 9)	13502	NM_001253680	20540	Mm.142455	NM_011405	ENSMUSG00000000958	Slc7a7	AI790233|my+lat1	solute carrier family 7 (cationic amino acid transporter, y+ system), member 7	protein-coding
unique_peak2-39356-7-17--1.37083417114412-1.23399803405144	chr9	6430344	6431079	+	0	NA	Intergenic	URR1B|DNA|MER1_type	-164164	NM_027942	71829	Mm.141452	NM_027942	ENSMUSG00000047619	Ddi1	1700011N24Rik	DDI1, DNA-damage inducible 1, homolog 1 (S. cerevisiae)	protein-coding
common_peak2-23096-10-6-0.549060422951165-1.21398586181642	chr14	76776265	76776716	+	0	NA	Intergenic	Intergenic	-39138	NM_207652	21807	Mm.153272	NM_009366	ENSMUSG00000022010	Tsc22d1	AA589566|AW105905|Egr5|TSC-22|Tgfb1i4|Tsc|Tsc22	TSC22 domain family, member 1	protein-coding
unique_peak1-6442-8-1-2.00522241794757-2.05605744720049	chr7	99128115	99128610	+	0	NA	intron (NM_011807, intron 9 of 22)	RMER12B|LTR|ERVK	-82542	NM_001243046	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
unique_peak2-36751-6-10--0.894033508256995-1.21398586181642	chr3	60516103	60516746	+	0	NA	Intergenic	Intergenic	211250	NM_001253708	56758	Mm.255723	NM_020007	ENSMUSG00000027763	Mbnl1	Mbnl|mKIAA0428	muscleblind-like 1 (Drosophila)	protein-coding
unique_peak1-807-18-9-0.990991056340989-1.23014042908325	chr11	3902657	3903387	+	0	NA	Intergenic	MTA_Mm-int|LTR|MaLR	13086	NM_001177691	53897	Mm.103414	NM_016922	ENSMUSG00000049721	Gal3st1	Cst|Gcst	galactose-3-O-sulfotransferase 1	protein-coding
common_peak2-29431-17-5-1.63333383748388-2.19184853030482	chr6	11906790	11907170	+	0	NA	intron (NM_001168382, intron 5 of 17)	L1_Mm|LINE|L1	31099	NM_001168382	75725	Mm.212411	NM_029404	ENSMUSG00000029629	Phf14	1110001C23Rik|4932409F11Rik|5730446A07Rik|AA623952|AV297001|mKIAA0783	PHD finger protein 14	protein-coding
unique_peak2-35925-7-5-0.214128329577033-1.01466476204226	chr19	6876478	6876889	+	0	NA	Intergenic	Intergenic	27751	NR_039555	100628576		NR_039555		Mir5046	mmu-mir-5046|mu-mir-5046	microRNA 5046	ncRNA
common_peak2-31232-27-32--0.0528481684632176-0.301029995663997	chr8	69995412	69996462	+	0	NA	Intergenic	L1M2|LINE|L1	-18720	NM_008673	17960	Mm.14125	NM_008673	ENSMUSG00000025588	Nat1	Nat-1	N-acetyl transferase 1	protein-coding
common_peak1-15928-84-166--0.448770233585027-1.76647422920059	chr5	24841368	24842776	+	0	NA	intron (NM_001081383, intron 27 of 58)	intron (NM_001081383, intron 27 of 58)	113361	NM_144908	231050	Mm.246718	NM_144908	ENSMUSG00000038072	Galnt11	A430075I06Rik|AI648252|E430002F06Rik	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11	protein-coding
unique_peak1-6343-10-1-2.35641534500877-2.57096726280955	chr7	55793526	55794035	+	0	NA	Intergenic	L1Md_F2|LINE|L1	19676	NM_175531	243979	Mm.83689	NM_175531	ENSMUSG00000050425	Mrgprb2	4833406I20Rik|Mgrg14	MAS-related GPR, member B2	protein-coding
common_peak1-12454-20-12-0.787635066450101-0.949240599462708	chr17	83538894	83539812	+	0	NA	Intergenic	Intergenic	-61788	NR_045094	100503434	Mm.187281	NR_045094		Gm19689	-	predicted gene, 19689	ncRNA
common_peak1-10234-10-10--0.103016273628528-0.301029995663987	chr13	52891937	52892465	+	0	NA	Intergenic	B4A|SINE|B4	-39627	NR_027893	105404	Mm.184173	NR_027893		BB123696	-	expressed sequence BB123696	ncRNA
common_peak2-32293-32-36-0.0696386535907099-0.327094617740873	chrX	37126723	37127638	+	0	NA	Intergenic	Intergenic	89601	NM_001191032	100504400	Mm.373409	NM_001191032	ENSMUSG00000095240	Cypt14	-	cysteine-rich perinuclear theca 14	protein-coding
common_peak2-19572-51-86--0.368019670246155-0.814709005062661	chr1	13372659	13374090	+	0	NA	Intergenic	Intergenic	-9210	NM_008678	17978	Mm.2537	NM_008678	ENSMUSG00000005886	Ncoa2	9530095N19|D1Ertd433e|GRIP-1|Grip1|KAT13C|SRC-2|TIF-2|TIF2|bHLHe75	nuclear receptor coactivator 2	protein-coding
common_peak2-25698-21-14-0.662598669657717-0.879255460030357	chr19	18631297	18631823	+	0	NA	Intergenic	Intergenic	74743	NM_017375	20409	Mm.172222	NM_017375		Ostf1	C78236|SH3P2|Sh3d3	osteoclast stimulating factor 1	protein-coding
unique_peak1-9-11-0-3.50869358425161-3.61235994796777	chr1	86491061	86491634	+	0	NA	Intergenic	Intergenic	1004038	NM_030194	109032	Mm.335802	NM_030194	ENSMUSG00000070034	Sp110	5031415C07Rik|52kDa|5830484A20Rik|ENSMUSG00000075603|Ifi75|Ipr1	Sp110 nuclear body protein	protein-coding
common_peak2-21969-21-14-0.662598669657717-0.879255460030357	chr12	45073650	45074472	+	0	NA	Intergenic	L1Md_T|LINE|L1	236994	NM_013760	27362	Mm.27432	NM_013760	ENSMUSG00000014905	Dnajb9	AA408011|AA673251|AA673481|AW556981|ERdj4|Mdg1|mDj7	DnaJ (Hsp40) homolog, subfamily B, member 9	protein-coding
common_peak2-26016-58-72-0.106125376010479-0.371520254652761	chr19	57360777	57361887	+	0	NA	Intergenic	MTC|LTR|MaLR	12882	NR_045319	78120	Mm.445892	NR_045319		4930449E18Rik	-	RIKEN cDNA 4930449E18 gene	ncRNA
unique_peak1-510-7-3-0.799090830298189-1.23214870625617	chr1	182368813	182369317	+	0	NA	intron (NM_001081227, intron 3 of 3)	intron (NM_001081227, intron 3 of 3)	44570	NM_001081227	381310	Mm.44791	NM_001081227	ENSMUSG00000053963	6330403A02Rik	ENSMUSG00000056615|Gm10001|R75555	RIKEN cDNA 6330403A02 gene	protein-coding
common_peak1-18358-12-35--1.52114901635467-2.5745355257554	chr8	69996695	69997324	+	0	NA	Intergenic	Lx5|LINE|L1	-17648	NM_008673	17960	Mm.14125	NM_008673	ENSMUSG00000025588	Nat1	Nat-1	N-acetyl transferase 1	protein-coding
common_peak1-13124-26-29-0.0210084965499435-0.304710633611964	chr19	8991173	8992530	+	0	NA	TTS (NM_001293621)	TTS (NM_001293621)	-3032	NM_024256	72727	Mm.259	NM_024256	ENSMUSG00000071649	B3gat3	2810405M13Rik	beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)	protein-coding
common_peak2-29509-9-5-0.604650905683064-1.21398586181642	chr6	34481358	34481682	+	0	NA	Intergenic	Intergenic	55164	NM_007563	12183	Mm.282863	NM_007563	ENSMUSG00000038871	Bpgm	AI323730|AL022789|C86192	2,3-bisphosphoglycerate mutase	protein-coding
unique_peak2-34450-6-7--0.434601889619698-0.97990265578305	chr14	24486540	24486970	+	0	NA	intron (NM_001253374, intron 1 of 28)	intron (NM_001253374, intron 1 of 28)	336672	NM_001253375	16531	Mm.343607	NM_010610	ENSMUSG00000063142	Kcnma1	5730414M22Rik|BKCa|MaxiK|Slo|Slo1|mSlo|mSlo1	potassium large conductance calcium-activated channel, subfamily M, alpha member 1	protein-coding
common_peak1-8573-16-11-0.533301141546906-0.58239619684445	chr10	97313132	97313894	+	0	NA	intron (NR_033537, intron 2 of 4)	intron (NR_033537, intron 2 of 4)	116211	NR_033537	100038699	Mm.467933	NR_033537		Gm10754	ENSMUSG00000074776	predicted gene 10754	ncRNA
common_peak2-27825-9-11--0.395349094316936-0.344532117358383	chr3	146447286	146447701	+	0	NA	intron (NM_011100, intron 1 of 9)	intron (NM_011100, intron 1 of 9)	-3113	NM_001164200	18749	Mm.16766	NM_011100	ENSMUSG00000005034	Prkacb	Pkacb	protein kinase, cAMP dependent, catalytic, beta	protein-coding
unique_peak2-40011-5-11--1.28934283672701-1.477227296591	chrY	67837187	67837714	+	0	NA	Intergenic	Intergenic	65450192	NM_001270512	100041505	Mm.491824	NM_001270512		Gm3376	Rbmy1b	predicted gene 3376	protein-coding
common_peak1-13763-17-11-0.633333837483882-0.769930178837768	chr2	34870541	34871308	+	0	NA	intron (NM_010406, intron 22 of 40)	intron (NM_010406, intron 22 of 40)	46037	NM_010406	15139	Mm.2168	NM_010406	ENSMUSG00000026874	Hc	C5|C5a|He	hemolytic complement	protein-coding
unique_peak2-34226-9-10--0.269818212233077-1.05503135781948	chr13	49768341	49768849	+	0	NA	intron (NR_073167, intron 13 of 16)	intron (NR_073167, intron 13 of 16)	-8904	NM_172015	105148	Mm.21118	NM_172015	ENSMUSG00000037851	Iars	2510016L12Rik|AI327140|AU044614|E430001P04Rik|ILRS	isoleucine-tRNA synthetase	protein-coding
unique_peak1-5625-9-0-3.18961340640422-3.01029995663981	chr6	8474469	8474923	+	0	NA	intron (NM_001286728, intron 1 of 7)	intron (NM_001286728, intron 1 of 7)	4638	NM_001286729	170772	Mm.210787	NM_133236	ENSMUSG00000029638	Glcci1	2310047L21Rik|A130036A18Rik|Fam117c|Gig18|Tssn1	glucocorticoid induced transcript 1	protein-coding
common_peak2-26134-12-7-0.648775985087639-0.697979855752659	chr2	11776875	11777358	+	0	NA	Intergenic	Intergenic	77736	NM_177268	320816	Mm.260201	NM_177268		Ankrd16	2810455F06Rik|AI646698|D430029B21Rik	ankyrin repeat domain 16	protein-coding
common_peak2-26401-13-12-0.0780323124966764-0.334470287753051	chr2	58561939	58562414	+	0	NA	intron (NM_001289660, intron 1 of 7)	intron (NM_001289660, intron 1 of 7)	-45419	NM_001289659	76654	Mm.200370	NM_029692	ENSMUSG00000026839	Upp2	1700124F02Rik|AI266885|UDRPASE2|UP2|UPASE2	uridine phosphorylase 2	protein-coding
unique_peak2-35947-7-5-0.214128329577033-1.01466476204226	chr19	10282078	10282439	+	0	NA	TTS (NM_026919)	TTS (NM_026919)	1735	NM_001163431	69038	Mm.375100	NM_026919	ENSMUSG00000036372	Tmem258	1810006K21Rik	transmembrane protein 258	protein-coding
unique_peak2-39246-4-6--0.830815435910851-0.989110657569874	chr8	114815501	114815927	+	0	NA	Intergenic	Intergenic	-278229	NM_130457	170571	Mm.209232	NM_130457	ENSMUSG00000031772	Cntnap4	Caspr4|E130114F09Rik	contactin associated protein-like 4	protein-coding
common_peak2-21854-8-7-0.00522241794757061-1.00793137938329	chr11	121719519	121719922	+	0	NA	Intergenic	MurSatRep1|Unknown|Unknown	28188	NM_029049	74675	Mm.61213	NM_029049	ENSMUSG00000039198	Ptchd3	4930451E13Rik|4933440L20Rik|RNDEu-3	patched domain containing 3	protein-coding
unique_peak2-39411-4-8--1.19338551529556-1.21878474469819	chr9	35111062	35111481	+	0	NA	Intergenic	A-rich|Low_complexity|Low_complexity	22581	NR_040715	71133	Mm.158577	NR_040715		4933422A05Rik	-	RIKEN cDNA 4933422A05 gene	ncRNA
common_peak2-19701-220-324-0.262874649914098-1.62770373883511	chr1	63112889	63114631	+	0	NA	intron (NM_001114609, intron 8 of 11)	polypurine|Low_complexity|Low_complexity	47081	NM_001081436	227195	Mm.74718	NM_001081436	ENSMUSG00000040865	Ino80d	7330405I11|A430093A21Rik|BC010584|OTTMUSG00000002594	INO80 complex subunit D	protein-coding
unique_peak1-2573-9-1-2.18961340640422-2.31132995230379	chr16	27387703	27388159	+	0	NA	Intergenic	Intergenic	-1111	NM_001025615	67501	Mm.258985	NM_026202	ENSMUSG00000038127	Ccdc50	C3orf6	coiled-coil domain containing 50	protein-coding
common_peak2-20374-22-14-0.740393509478886-0.983972868822056	chr10	14545082	14545810	+	0	NA	Intergenic	Intergenic	65351	NM_008703	18101	Mm.487342	NM_008703	ENSMUSG00000019865	Nmbr	BB182387	neuromedin B receptor	protein-coding
unique_peak2-40007-6-13--1.2419568116773-1.58711810488664	chrY	37765807	37766440	+	0	NA	Intergenic	Intergenic	35378865	NM_001270512	100041505	Mm.491824	NM_001270512		Gm3376	Rbmy1b	predicted gene 3376	protein-coding
common_peak2-20162-21-25--0.130950452874856-0.305461879681376	chr1	170853743	170854514	+	0	NA	Intergenic	Intergenic	433354	NR_105766	102465178		NR_105766	miRBase:MI0021876	Mir6348	mmu-mir-6348	microRNA mir-6348	ncRNA
common_peak1-10506-10-12--0.344024373132323-0.340565874754526	chr14	70074319	70074871	+	0	NA	intron (NM_033325, intron 7 of 13)	intron (NM_033325, intron 7 of 13)	-17460	NR_105915	102465573		NR_105915		Mir6950	mmu-mir-6950	microRNA mir-6950	ncRNA
unique_peak1-7086-10-4-1.03448725012141-1.5150158574804	chr9	26999798	27000230	+	0	NA	Intergenic	Intergenic	-37008	NM_023277	83964	Mm.28770	NM_023277	ENSMUSG00000031990	Jam3	1110002N23Rik|JAM-3|JAM-C|Jcam3	junction adhesion molecule 3	protein-coding
common_peak2-23474-13-6-0.971117108580164-1.01572999746118	chr15	73434208	73434619	+	0	NA	intron (NM_001033219, intron 2 of 7)	intron (NM_001033219, intron 2 of 7)	-7457	NM_001168255	106068	Mm.212813	NM_001033219	ENSMUSG00000079020	Slc45a4	9330175B01Rik|AW552276	solute carrier family 45, member 4	protein-coding
unique_peak1-1821-9-1-2.18961340640422-2.31132995230379	chr14	32074092	32074616	+	0	NA	exon (NM_001033668, exon 77 of 78)	exon (NM_001033668, exon 77 of 78)	9679	NM_027088	104416	Mm.3779	NM_027088	ENSMUSG00000021901	Bap1	2300006C11Rik|AA989761|AW553466|mKIAA0272|uch-x4	Brca1 associated protein 1	protein-coding
unique_peak2-39559-5-12--1.40482005414695-1.62698961692433	chr9	70731462	70731852	+	0	NA	intron (NM_008280, intron 1 of 8)	intron (NM_008280, intron 1 of 8)	50958	NM_008280	15450	Mm.390187	NM_008280	ENSMUSG00000032207	Lipc	AI256194|HL|Hpl	lipase, hepatic	protein-coding
common_peak2-29582-35-42-0.00510550376040619-0.30358472802154	chr6	48554135	48555570	+	0	NA	Intergenic	Intergenic	-8327	NM_173429	243372	Mm.435190	NM_173429	ENSMUSG00000007216	Zfp775	C130032F08Rik|Znf775	zinc finger protein 775	protein-coding
common_peak1-15942-22-10-1.18785248645011-1.74319850844462	chr5	29387303	29388133	+	0	NA	Intergenic	L1Md_A|LINE|L1	-134815	NM_021470	56874	Mm.87352	NM_021470	ENSMUSG00000029130	Rnf32	1700009J01Rik|2700025B22Rik|4930542N22Rik|Lmbr2	ring finger protein 32	protein-coding
common_peak2-24575-36-63--0.520678913832246-0.955521670249469	chr17	29660593	29661499	+	0	NA	Intergenic	Intergenic	25492	NM_001162901	71138	Mm.158581	NM_001162901	ENSMUSG00000079580	Tmem217	4933413N12Rik|EG622644	transmembrane protein 217	protein-coding
common_peak1-16492-31-56--0.607651343351618-1.1498986797243	chr5	138618904	138619779	+	0	NA	TTS (NM_009315)	TTS (NM_009315)	6092	NM_021392	11781	Mm.113205	NM_021392	ENSMUSG00000019518	Ap4m1	4930443L05Rik|Ap4m4	adaptor-related protein complex AP-4, mu 1	protein-coding
unique_peak2-35217-7-36--2.41036253533076-4.9487525270151	chr16	91010314	91011192	+	0	NA	promoter-TSS (NR_028368)	promoter-TSS (NR_028368)	587	NM_001045515	104015	Mm.187079	NM_001045515	ENSMUSG00000022973	Synj1	A930006D20Rik|AA675315|mKIAA0910	synaptojanin 1	protein-coding
common_peak1-7747-7-8--0.370834171144123-1.00793137938329	chr1	90915063	90915614	+	0	NA	intron (NR_040471, intron 2 of 2)	intron (NR_040471, intron 2 of 2)	2650	NR_040471	73475	Mm.491040	NR_040471		1700067G17Rik	-	RIKEN cDNA 1700067G17 gene	ncRNA
unique_peak2-35083-6-7--0.434601889619698-0.97990265578305	chr16	17531597	17532022	+	0	NA	promoter-TSS (NM_026909)	promoter-TSS (NM_026909)	-664	NM_026909	69009	Mm.10174	NM_026909	ENSMUSG00000022760	Thap7	1810004B07Rik	THAP domain containing 7	protein-coding
unique_peak2-32816-4-9--1.34538860874061-1.36011389749466	chr1	184999248	184999780	+	0	NA	Intergenic	Intergenic	114595	NM_016928	53791	Mm.116894	NM_016928	ENSMUSG00000079164	Tlr5	-	toll-like receptor 5	protein-coding
unique_peak2-35896-9-12--0.510826311736872-0.394412252720706	chr19	3905040	3905517	+	0	NA	promoter-TSS (NM_016921)	promoter-TSS (NM_016921)	-48	NM_016921	27060	Mm.271689	NM_016921	ENSMUSG00000001750	Tcirg1	ATP6N1C|ATP6a3|Atp6i|OC-116|OPTB1|Stv1|TIRC7|Vph1|oc	T cell, immune regulator 1, ATPase, H+ transporting, lysosomal V0 protein A3	protein-coding
common_peak2-31157-13-6-0.971117108580164-1.01572999746118	chr8	44877396	44877824	+	0	NA	Intergenic	L1Md_T|LINE|L1	-92765	NM_001079931	384814	Mm.491652	NM_001079931		Gm5347	EG384814	predicted gene 5347	protein-coding
common_peak1-16654-19-13-0.595332404604082-0.713635438203849	chr6	100498804	100499682	+	0	NA	Intergenic	RLTR20B3|LTR|ERVK	21849	NR_040525	73395	Mm.69413	NR_040525		1700049E22Rik	-	RIKEN cDNA 1700049E22 gene	ncRNA
unique_peak2-39918-4-18--2.27138802729683-2.39353597935438	chrX	101532670	101533273	+	0	NA	intron (NM_009592, intron 3 of 15)	B3|SINE|B2	76214	NM_009592	11306	Mm.426128	NM_009592	ENSMUSG00000031333	Abcb7	AA517758|AU019072|Abc7	ATP-binding cassette, sub-family B (MDR/TAP), member 7	protein-coding
unique_peak1-5426-10-0-3.35641534500877-3.31132995230379	chr5	113268611	113269160	+	0	NA	intron (NM_028901, intron 15 of 43)	intron (NM_028901, intron 15 of 43)	46573	NR_040676	67360	Mm.59218	NR_040675	ENSMUSG00000098230	1700095B10Rik	-	RIKEN cDNA 1700095B10 gene	ncRNA
unique_peak2-32570-7-13--1.00826409175941-0.697979855752659	chr1	85894760	85895447	+	0	NA	Intergenic	Intergenic	-627962	NM_001037909	620078	Mm.386456	NM_175219	ENSMUSG00000052477	C130026I21Rik	4930565N07Rik|OTTMUSG00000029174	RIKEN cDNA C130026I21 gene	protein-coding
common_peak2-28474-15-14-0.105274154947137-0.330004445983672	chr4	155174118	155174975	+	0	NA	Intergenic	RLTR15|LTR|ERVK	-3181	NM_025570	66448	Mm.23825	NM_025570	ENSMUSG00000029066	Mrpl20	2610008D01Rik|4930425I20Rik	mitochondrial ribosomal protein L20	protein-coding
unique_peak2-32846-6-5--0.0195643903408542-0.947717972411649	chr1	193423478	193423841	+	0	NA	intron (NM_178632, intron 7 of 19)	intron (NM_178632, intron 7 of 19)	24046	NM_178632	77065	Mm.338175	NM_178632	ENSMUSG00000037461	Ints7	5930412E23Rik	integrator complex subunit 7	protein-coding
common_peak2-29094-5-10--1.16381195464315-1.33892459842472	chr5	122354365	122354834	+	0	NA	intron (NM_007804, intron 4 of 22)	MIRb|SINE|MIR	55562	NM_175474	231717	Mm.12654	NM_175474	ENSMUSG00000044134	Fam109a	A230106M15Rik|AU017694|IPIP27A|Ses1	family with sequence similarity 109, member A	protein-coding
common_peak1-11515-91-68-0.964907488824169-5.19408822991985	chr16	43663035	43665729	+	0	NA	promoter-TSS (NM_001146325)	promoter-TSS (NM_001146325)	-85	NM_001146325	100043314	Mm.390896	NM_001146325	ENSMUSG00000071552	Tigit	ENSMUSG00000071552|Vstm3	T cell immunoreceptor with Ig and ITIM domains	protein-coding
unique_peak2-34126-2-19--3.23938235115068-3.75443312462699	chr13	21811759	21812577	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-1745	NM_178200	319186	Mm.277425	NM_178200	ENSMUSG00000096807	Hist1h2bm	H2b-291b	histone cluster 1, H2bm	protein-coding
unique_peak2-38424-1-8--2.79698201165906-2.05605744720049	chr7	25396212	25396705	+	0	NA	exon (NM_001102613, exon 1 of 15)	exon (NM_001102613, exon 1 of 15)	111	NM_001102613	232970	Mm.333663	NM_001102613	ENSMUSG00000074277	Phldb3	EG232970|ENSMUSG00000061511|Gm10102	pleckstrin homology-like domain, family B, member 3	protein-coding
unique_peak1-7089-18-4-1.99099105634099-2.82951996911245	chr9	32721188	32722006	+	0	NA	Intergenic	Intergenic	217970	NM_001038642	23871	Mm.292415	NM_011808	ENSMUSG00000032035	Ets1	AI196000|AI448617|D230050P06|Ets-1|Tpl1	E26 avian leukemia oncogene 1, 5' domain	protein-coding
unique_peak1-6316-10-2-1.77145284428761-2.09384600808989	chr7	44818986	44819382	+	0	NA	Intergenic	Intergenic	1700720	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak2-37030-6-5--0.0195643903408542-0.947717972411649	chr3	129536533	129536899	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-2402	NM_026578	68147	Mm.24873	NM_026578	ENSMUSG00000028010	Gar1	AA409823|AI326794|C430047J18Rik|Nola1	GAR1 ribonucleoprotein homolog (yeast)	protein-coding
unique_peak1-7132-8-2-1.42025991722641-1.65811743852845	chr9	53332796	53333277	+	0	NA	intron (NM_007499, intron 5 of 63)	LTR40a|LTR|ERVL	11740	NM_007499	11920	Mm.5088	NM_007499	ENSMUSG00000034218	Atm	AI256621|C030026E19Rik	ataxia telangiectasia mutated	protein-coding
common_peak2-22413-9-12--0.510826311736872-0.394412252720706	chr13	35740575	35741220	+	0	NA	Intergenic	Intergenic	-10834	NM_009881	12593	Mm.29002	NM_009881	ENSMUSG00000059288	Cdyl	AI325931	chromodomain protein, Y chromosome-like	protein-coding
unique_peak1-5698-5-1-1.29561966399415-1.32905871926422	chr6	34736786	34737214	+	0	NA	intron (NM_178630, intron 4 of 18)	intron (NM_178630, intron 4 of 18)	6568	NM_001289656	76223	Mm.150047	NM_178630	ENSMUSG00000038836	Agbl3	2900053G10Rik|4930431N21Rik|6530406M24Rik|CCP3	ATP/GTP binding protein-like 3	protein-coding
unique_peak1-5138-7-5-0.214128329577033-1.01466476204226	chr5	13387012	13387507	+	0	NA	Intergenic	ORR1D2|LTR|MaLR	-9525	NM_001243072	20346	Mm.372039	NM_009152	ENSMUSG00000028883	Sema3a	Hsema-I|SEMA1|SemD|Semad|coll-1	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A	protein-coding
common_peak2-29521-11-6-0.701338662194009-1.32595962126035	chr6	35020323	35020709	+	0	NA	intron (NM_001164413, intron 3 of 11)	intron (NM_001164413, intron 3 of 11)	63221	NM_001164412	53621	Mm.214525	NM_016877	ENSMUSG00000038784	Cnot4	Not4|Not4h|Not4hp	CCR4-NOT transcription complex, subunit 4	protein-coding
common_peak2-29462-22-20-0.254966682308644-0.421916810733237	chr6	29348178	29348689	+	0	NA	promoter-TSS (NM_145574)	promoter-TSS (NM_145574)	-493	NM_145574	232664	Mm.251303	NM_145574	ENSMUSG00000029769	Ccdc136	4921511K06Rik|BC006583	coiled-coil domain containing 136	protein-coding
common_peak2-23492-83-77-0.628820406243878-2.44207711192071	chr15	75909071	75910324	+	0	NA	intron (NM_028364, intron 1 of 11)	intron (NM_028364, intron 1 of 11)	1603	NM_001164600	67959	Mm.29965	NM_028364	ENSMUSG00000002524	Puf60	2410104I19Rik|2810454F19Rik|SIAHBP1	poly-U binding splicing factor 60	protein-coding
common_peak2-28102-17-20--0.174021084573723-0.306598483909156	chr4	88799528	88800204	+	0	NA	intron (NM_024433, intron 3 of 7)	intron (NM_024433, intron 3 of 7)	16592	NM_024433	66902	Mm.28500	NM_024433	ENSMUSG00000062937	Mtap	1300019I21Rik|MSAP	methylthioadenosine phosphorylase	protein-coding
common_peak1-15477-8-4-0.683294323060208-1.21878474469819	chr4	107889736	107890221	+	0	NA	intron (NM_001167936, intron 1 of 13)	CpG	549	NM_001167936	230590	Mm.301798	NM_001167936	ENSMUSG00000034645	Zyg11a	BC022150	zyg-11 family member A, cell cycle regulator	protein-coding
common_peak2-28925-12-24--0.995080204687086-1.0220094258199	chr5	92823045	92823812	+	0	NA	intron (NM_181728, intron 4 of 9)	GA-rich|Low_complexity|Low_complexity	-31106	NR_038116	56066	Mm.131723	NM_019494	ENSMUSG00000060183	Cxcl11	Cxc11|H174|I-tac|Ip9|Itac|Scyb11|Scyb9b|b-R1|betaR1	chemokine (C-X-C motif) ligand 11	protein-coding
unique_peak2-32745-8-7-0.00522241794757061-1.00793137938329	chr1	167232098	167232514	+	0	NA	intron (NM_001081126, intron 2 of 6)	intron (NM_001081126, intron 2 of 6)	6409	NM_001081126	240888	Mm.329929	NM_001081126		Gpr161	Gm208|Gm208Gpr|vl	G protein-coupled receptor 161	protein-coding
unique_peak1-3226-7-4-0.477162735410827-1.09384600808989	chr18	60671867	60672388	+	0	NA	Intergenic	MTEb|LTR|MaLR	-10490	NM_134133	106878	Mm.273197	NM_134133	ENSMUSG00000038059	Smim3	2010002N04Rik|AI195350|AW561905|Nid67|cI-41	small integral membrane protein 3	protein-coding
unique_peak1-3475-12-3-1.64877598508764-2.36932189928148	chr19	10183612	10184092	+	0	NA	Intergenic	Intergenic	-7859	NM_019699	56473	Mm.38901	NM_019699	ENSMUSG00000024665	Fads2	2900042M13Rik|Fadsd2	fatty acid desaturase 2	protein-coding
unique_peak2-36763-2-5--1.50241675698448-1.08602067057793	chr3	65260519	65260808	+	0	NA	Intergenic	Intergenic	-64188	NM_026155	67437	Mm.232728	NM_026155	ENSMUSG00000027828	Ssr3	0610038P07Rik|AL022999|AU022074|AW553833|TRAPG	signal sequence receptor, gamma	protein-coding
unique_peak1-4467-6-1-1.5653981103803-1.56314192529759	chr2	180279665	180280156	+	0	NA	TTS (NM_018766)	TTS (NM_018766)	-36099	NM_028479	73247	Mm.426558	NM_028479	ENSMUSG00000027569	Mrgbp	1600027N09Rik|AW060503|C80444	MRG/MORF4L binding protein	protein-coding
common_peak2-26587-11-6-0.701338662194009-1.32595962126035	chr2	109405884	109406333	+	0	NA	Intergenic	Kanga2_a|DNA|Tc2	-108749	NM_007540	12064	Mm.1442	NM_007540	ENSMUSG00000048482	Bdnf	-	brain derived neurotrophic factor	protein-coding
unique_peak2-37510-8-10--0.454209200689727-1.078512453669	chr5	17358928	17359440	+	0	NA	intron (NM_001159558, intron 1 of 15)	intron (NM_001159558, intron 1 of 15)	-3574	NM_001159557	12491	Mm.18628	NM_007643	ENSMUSG00000002944	Cd36	FAT|GPIV|Scarb3	CD36 antigen	protein-coding
common_peak1-11751-14-18--0.348711353085941-0.360333814299795	chr16	36828374	36829071	+	0	NA	promoter-TSS (NM_001113401)	promoter-TSS (NM_001113401)	236	NM_177128	320299	Mm.222934	NM_177128	ENSMUSG00000022837	Iqcb1	6820449I09Rik|AV128382|NPHP5	IQ calmodulin-binding motif containing 1	protein-coding
common_peak1-8904-15-17--0.157760250886656-0.307611222530528	chr11	50225268	50225939	+	0	NA	intron (NM_172557, intron 7 of 17)	intron (NM_172557, intron 7 of 17)	19010	NM_172557	216724	Mm.390400	NM_172557	ENSMUSG00000020375	Rufy1	3000002E04Rik|Rabip4|ZFYVE12	RUN and FYVE domain containing 1	protein-coding
common_peak2-29418-12-5-1.06381348436648-1.78669045979184	chr6	5255767	5256154	+	0	NA	Intergenic	Intergenic	-7587	NM_183308	330260	Mm.126984	NM_183308		Pon2	6330405I24Rik|AI481612	paraoxonase 2	protein-coding
unique_peak1-5689-8-4-0.683294323060208-1.21878474469819	chr6	34240038	34240597	+	0	NA	Intergenic	Intergenic	27126	NR_037965	626009	Mm.451	NR_028277		Gm6644	Akr1b3p|EG626009	Akr1b3 pseudogene	pseudo
unique_peak2-38282-3-5--0.998945590680433-0.96108193396963	chr6	134144695	134145044	+	0	NA	intron (NM_007961, intron 2 of 7)	intron (NM_007961, intron 2 of 7)	159144	NM_007961	14011	Mm.269995	NM_007961	ENSMUSG00000030199	Etv6	AW123102|AW557856|Tel	ets variant 6	protein-coding
common_peak2-26261-10-11--0.228547155712387-0.31137425193576	chr2	30392379	30393000	+	0	NA	Intergenic	Intergenic	-57875	NM_030137	78617	Mm.40413	NM_030137	ENSMUSG00000047363	Cstad	9530039B02Rik	CSA-conditional, T cell activation-dependent protein	protein-coding
common_peak2-31686-9-11--0.395349094316936-0.344532117358383	chr8	127318037	127318486	+	0	NA	exon (NM_198632, exon 1 of 10)	exon (NM_198632, exon 1 of 10)	1342	NM_198632	330863	Mm.422769	NM_198632	ENSMUSG00000036913	Trim67	D130049O21Rik|TNL	tripartite motif-containing 67	protein-coding
unique_peak1-2484-11-4-1.18676548936425-1.68134727924692	chr16	6842201	6842784	+	0	NA	intron (NM_021477, intron 5 of 16)	intron (NM_021477, intron 5 of 16)	-227436	NM_183188	268859	Mm.370334	NM_021477	ENSMUSG00000008658	Rbfox1	A2bp|A2bp1|Hrnbp1|fox-1	RNA binding protein, fox-1 homolog (C. elegans) 1	protein-coding
common_peak1-9871-9-19--1.13231468848314-1.09394599973099	chr12	82169559	82170011	+	0	NA	intron (NM_022316, intron 1 of 12)	MER31-int|LTR|ERV1	41990	NM_022316	64075	Mm.273295	NM_022316	ENSMUSG00000021136	Smoc1	2600002F22Rik|AI848508|SRG	SPARC related modular calcium binding 1	protein-coding
common_peak2-20720-9-7-0.18961340640422-1.05908390183068	chr10	95863596	95864034	+	0	NA	Intergenic	Intergenic	174974	NR_110448	74881	Mm.410819	NR_110448		4930459C07Rik	-	RIKEN cDNA 4930459C07 gene	ncRNA
common_peak1-15580-43-66--0.283526004934069-0.518477330661964	chr4	128727012	128728544	+	0	NA	Intergenic	Intergenic	-7737	NM_029219	75234	Mm.259672	NM_029219	ENSMUSG00000028793	Rnf19b	4930534K13Rik|4930555L03Rik|Ibrdc3	ring finger protein 19B	protein-coding
common_peak2-29483-16-17--0.0516613591742505-0.301029995663984	chr6	31088540	31089337	+	0	NA	intron (NR_110471, intron 3 of 3)	intron (NR_110471, intron 3 of 3)	-75845	NR_029532	387223		NR_029532	miRBase:MI0000143	Mir29b-1	Mirn29b|Mirn29b-1	microRNA 29b-1	ncRNA
common_peak2-22633-17-13-0.410941416147434-0.546772548767014	chr13	90234457	90235099	+	0	NA	intron (NM_025335, intron 1 of 3)	intron (NM_025335, intron 1 of 3)	5506	NM_025335	66074	Mm.241387	NM_025335		Tmem167	0610041E09Rik|5730424F14Rik|AU041184|AW537806|ENSMUSG00000060669|Gm10085|Tmem167a	transmembrane protein 167	protein-coding
common_peak1-14182-59-47-0.740401500151422-2.18456516591729	chr2	144187447	144189497	+	0	NA	Intergenic	RMER1C|Other|Other	-6247	NM_001164813	100048644	Mm.227925	NM_001164813		Pet117	Gm20571	PET117 homolog (S. cerevisiae)	protein-coding
common_peak1-18437-13-10-0.319040412000471-0.446472590016315	chr8	79611006	79611705	+	0	NA	intron (NM_001083906, intron 3 of 8)	intron (NM_001083906, intron 3 of 8)	184948	NM_001083906	110784	Mm.324393	NM_001083906	ENSMUSG00000031618	Nr3c2	MR|Mlr	nuclear receptor subfamily 3, group C, member 2	protein-coding
common_peak1-13676-67-67-0.456948641532656-1.2225580734244	chr2	28640518	28642002	+	0	NA	intron (NM_001033874, intron 11 of 12)	intron (NM_001033874, intron 11 of 12)	52462	NR_037271	100526498		NR_037271		Mir3088	mmu-mir-3088	microRNA 3088	ncRNA
common_peak2-29613-17-10-0.75886471956774-0.917676348953458	chr6	54162672	54163193	+	0	NA	intron (NM_001163640, intron 3 of 12)	intron (NM_001163640, intron 3 of 12)	-59884	NM_023543	69993	Mm.321147	NM_023543	ENSMUSG00000004633	Chn2	1700026N20Rik|4930557O16Rik|ARHGAP3|Bch	chimerin 2	protein-coding
common_peak1-15595-11-17--0.661231417190699-0.58239619684445	chr4	129877547	129878116	+	0	NA	Intergenic	Intergenic	21708	NM_001034872	332942	Mm.387701	NM_001034872	ENSMUSG00000023120	Gm853	OTTMUSG00000009560	predicted gene 853	protein-coding
common_peak1-17354-46-31-0.897995943248802-2.34328043174784	chr7	18857164	18858558	+	0	NA	Intergenic	Intergenic	27165	NM_153749	266815	Mm.106769	NM_153749	ENSMUSG00000054005	Mill1	5530400I18Rik	MHC I like leukocyte 1	protein-coding
unique_peak2-39131-5-5--0.289342836727009-0.909929411522249	chr8	84722516	84722936	+	0	NA	Intergenic	MLT1G1|LTR|MaLR	203759	NM_001254747	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak2-26265-8-8--0.164702583494742-1.00793137938329	chr2	30453339	30453898	+	0	NA	intron (NM_030137, intron 1 of 1)	(TGG)n|Simple_repeat|Simple_repeat	3054	NM_030137	78617	Mm.40413	NM_030137	ENSMUSG00000047363	Cstad	9530039B02Rik	CSA-conditional, T cell activation-dependent protein	protein-coding
common_peak2-32330-31-48--0.389471173302085-0.611014125894502	chrX	74023014	74024131	+	0	NA	Intergenic	Lx|LINE|L1	-175309	NM_001201395	74987	Mm.107996	NM_001201395	ENSMUSG00000079525	4930468A15Rik	-	RIKEN cDNA 4930468A15 gene	protein-coding
unique_peak2-39174-13-18--0.469455482805817-0.409888142029227	chr8	94787429	94788282	+	0	NA	Intergenic	MLT1F2|LTR|MaLR	92164	NR_110452	71296	Mm.86664	NR_033641	ENSMUSG00000031736	Crnde	4933436C20Rik	colorectal neoplasia differentially expressed (non-protein coding)	ncRNA
common_peak1-9526-64-25-1.76500668356751-8.38253075808322	chr11	115953889	115955911	+	0	NA	Intergenic	Intergenic	-6622	NM_016852	22378	Mm.284792	NM_016852	ENSMUSG00000034341	Wbp2	-	WW domain binding protein 2	protein-coding
common_peak1-13408-25-27-0.0544949832875021-0.316543811862083	chr19	47901762	47903109	+	0	NA	intron (NM_027559, intron 3 of 37)	ORR1A2|LTR|MaLR	9416	NM_027559	100048534	Mm.29457	NM_027559	ENSMUSG00000044948	Cfap43	4632415N18Rik|4930428C11Rik|4930463G05Rik|AI429486|D19Ertd652e|Wdr96	cilia and flagella associated protein 43	protein-coding
unique_peak1-1368-8-0-3.00522241794757-2.70926996097583	chr12	35761390	35761610	+	0	NA	intron (NM_001014973, intron 1 of 25)	intron (NM_001014973, intron 1 of 25)	29639	NM_001014973	217463	Mm.213991	NM_001014973	ENSMUSG00000020590	Snx13	Rgs-px1|mKIAA0713	sorting nexin 13	protein-coding
common_peak1-11005-38-35-0.401527657856218-0.7449989148481	chr15	36901043	36902492	+	0	NA	Intergenic	ORR1E|LTR|MaLR	35390	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
common_peak1-17520-10-6-0.549060422951165-1.21398586181642	chr7	28267753	28268280	+	0	NA	Intergenic	Intergenic	-3956	NM_018820	55942	Mm.153684	NM_018820	ENSMUSG00000008384	Sertad1	1110032C13Rik|AV000455|AW456625|Sei-1|Sei1|TRIP-Br1	SERTA domain containing 1	protein-coding
common_peak1-7835-21-16-0.482026424015896-0.650819692678078	chr1	128391971	128392981	+	0	NA	intron (NM_001081756, intron 3 of 16)	intron (NM_001081756, intron 3 of 16)	-2972	NM_172484	210356	Mm.377234	NM_172484	ENSMUSG00000049690	Nckap5	8430408F21|D130011D22Rik|E030049G20Rik|Erih1|Erih2|Gm1548|Nap5	NCK-associated protein 5	protein-coding
unique_peak2-36938-8-10--0.454209200689727-1.078512453669	chr3	104220863	104221440	+	0	NA	Intergenic	Intergenic	94628	NM_001025067	269473	Mm.34855	NM_001025067	ENSMUSG00000032913	Lrig2	4632419I10Rik|BB096938	leucine-rich repeats and immunoglobulin-like domains 2	protein-coding
unique_peak1-4901-13-8-0.608547029195456-0.660903317613904	chr4	45500509	45501175	+	0	NA	intron (NM_001033306, intron 2 of 5)	intron (NM_001033306, intron 2 of 5)	42858	NM_001033306	230126	Mm.251716	NM_001033306	ENSMUSG00000044813	Shb	BC028832	src homology 2 domain-containing transforming protein B	protein-coding
unique_peak1-167-10-3-1.35641534500877-1.75805390616669	chr1	74036564	74037086	+	0	NA	intron (NM_001289895, intron 12 of 32)	intron (NM_001289895, intron 12 of 32)	-125785	NR_045311	109198	Mm.359721	NR_045311		6030407O03Rik	-	RIKEN cDNA 6030407O03 gene	ncRNA
common_peak1-18909-11-23--1.07626891646954-1.24082643394777	chr9	41475453	41476136	+	0	NA	Intergenic	AT_rich|Low_complexity|Low_complexity	85785	NR_029822	387236		NR_029822	miRBase:MI0000725	Mir125b-1	Mirn125b|Mirn125b-1	microRNA 125b-1	ncRNA
common_peak2-22753-19-24--0.241168863113038-0.344491671143527	chr13	113602882	113603587	+	0	NA	intron (NM_008903, intron 1 of 5)	ID_B1|SINE|B4	12249	NM_008247	19012	Mm.317186	NM_008247	ENSMUSG00000021759	Ppap2a	Hic53|Hpic53|LPP-1|LPP1|PAP-2a|PAP2-alpha|PAP2a|mPAP	phosphatidic acid phosphatase type 2A	protein-coding
common_peak2-24681-26-28-0.0699180970308904-0.316008636696532	chr17	42982137	42982983	+	0	NA	intron (NM_009847, intron 2 of 17)	B1F|SINE|Alu	30813	NM_009847	12488	Mm.218637	NM_009847	ENSMUSG00000061665	Cd2ap	AL024079|C78928|METS-1|Mets1	CD2-associated protein	protein-coding
unique_peak2-32652-9-13--0.617741515653384-0.459837087125828	chr1	133198198	133199052	+	0	NA	intron (NM_001081011, intron 18 of 22)	intron (NM_001081011, intron 18 of 22)	-22485	NM_019777	56489	Mm.386783	NM_019777	ENSMUSG00000042349	Ikbke	AW558201|IKK-i|IKKepsilon|Ikki	inhibitor of kappaB kinase epsilon	protein-coding
unique_peak2-35946-8-8--0.164702583494742-1.00793137938329	chr19	10274832	10275250	+	0	NA	exon (NM_001271615, exon 2 of 2)	exon (NM_001271615, exon 2 of 2)	3392	NM_007999	14156	Mm.2952	NM_007999	ENSMUSG00000024742	Fen1	AW538437|FEN-1	flap structure specific endonuclease 1	protein-coding
common_peak1-18357-28-34--0.0763238971235038-0.304271119602326	chr8	69995169	69996298	+	0	NA	Intergenic	Intergenic	-18924	NM_008673	17960	Mm.14125	NM_008673	ENSMUSG00000025588	Nat1	Nat-1	N-acetyl transferase 1	protein-coding
unique_peak1-687-10-1-2.35641534500877-2.57096726280955	chr10	77652900	77653144	+	0	NA	intron (NM_001081055, intron 21 of 22)	intron (NM_001081055, intron 21 of 22)	-5128	NM_029546	110816	Mm.103522	NM_029546	ENSMUSG00000032834	Pwp2	6530411D08Rik|Pwp2h|wdp103	PWP2 periodic tryptophan protein homolog (yeast)	protein-coding
common_peak2-24105-10-7-0.356415345008769-1.12966497611638	chr16	32665990	32666447	+	0	NA	non-coding (NR_033493, exon 2 of 3)	non-coding (NR_033493, exon 2 of 3)	2065	NR_033493	675921	Mm.404316	NR_033493	ENSMUSG00000075265	Tnk2os	ENSMUSG00000075265|Gm10818	tyrosine kinase, non-receptor 2, opposite strand	ncRNA
unique_peak1-2588-8-0-3.00522241794757-2.70926996097583	chr16	31352933	31353341	+	0	NA	Intergenic	Intergenic	-38243	NM_001301354	11815	Mm.2082	NM_007470	ENSMUSG00000022548	Apod	-	apolipoprotein D	protein-coding
common_peak1-9772-9-4-0.867685311516858-1.36011389749466	chr12	55492686	55493138	+	0	NA	promoter-TSS (NR_033689)	promoter-TSS (NR_033689)	-607	NR_033689	665239	Mm.26856	NR_033689		Gm7550	EG665239|Gm666	predicted gene 7550	ncRNA
common_peak1-13882-44-70--0.327854284936147-0.590496457913116	chr2	73910563	73912008	+	0	NA	Intergenic	Intergenic	-161934	NM_175015	228033	Mm.2966	NM_175015	ENSMUSG00000018770	Atp5g3	6030447M23	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9)	protein-coding
common_peak1-17218-121-70-1.41761866237332-12.7958053779219	chr6	125432623	125435826	+	0	NA	intron (NM_007657, intron 1 of 7)	intron (NM_007657, intron 1 of 7)	10549	NM_007657	12527	Mm.210676	NM_007657	ENSMUSG00000030342	Cd9	Tspan29	CD9 antigen	protein-coding
common_peak2-26651-13-16--0.30899081061257-0.330004445983672	chr2	120563340	120563867	+	0	NA	3' UTR (NM_080788, exon 16 of 16)	3' UTR (NM_080788, exon 16 of 16)	-6350	NM_026891	68968	Mm.2289	NM_026891	ENSMUSG00000027284	Cdan1	1500015A01Rik|AI448026|AW492297|CDA-I|CDA1|CDAI	congenital dyserythropoietic anemia, type I (human)	protein-coding
common_peak1-16770-33-53--0.423549939637939-0.696926118858569	chr6	35539032	35539977	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-49616	NM_008098	14489	Mm.182746	NM_008098	ENSMUSG00000029840	Mtpn	5033418D15Rik|Gcdp|V1	myotrophin	protein-coding
common_peak2-25358-45-35-0.69043302390256-1.54911055580825	chr18	80554846	80555998	+	0	NA	intron (NM_001190373, intron 1 of 3)	intron (NM_001190373, intron 1 of 3)	5571	NM_001190373	240444	Mm.279568	NM_001190373	ENSMUSG00000059852	Kcng2	AA591524	potassium voltage-gated channel, subfamily G, member 2	protein-coding
common_peak2-22986-56-68-0.127071368661074-0.375466836511065	chr14	56811831	56812979	+	0	NA	Intergenic	L1Md_T|LINE|L1	17839	NM_010374	14943	Mm.457976	NM_010374	ENSMUSG00000015441	Gzmf	CCP4|Ctla-7|Ctla7|MCSP-3	granzyme F	protein-coding
common_peak1-8512-8-3-1.00522241794757-1.39487600375387	chr10	82955274	82955493	+	0	NA	exon (NM_153543, exon 22 of 23)	exon (NM_153543, exon 22 of 23)	41502	NM_153543	216188	Mm.263138	NM_153543	ENSMUSG00000020256	Aldh1l2	D330038I09Rik|mtFDH	aldehyde dehydrogenase 1 family, member L2	protein-coding
unique_peak1-6778-7-3-0.799090830298189-1.23214870625617	chr8	62128380	62128856	+	0	NA	Intergenic	L1Md_T|LINE|L1	738066	NM_173411	234290	Mm.39244	NM_173411	ENSMUSG00000049946	BC030500	-	cDNA sequence BC030500	protein-coding
common_peak1-17256-111-128-0.406466535986914-1.64852438217524	chr6	134034604	134036464	+	0	NA	intron (NM_007961, intron 1 of 7)	intron (NM_007961, intron 1 of 7)	49809	NM_007961	14011	Mm.269995	NM_007961	ENSMUSG00000030199	Etv6	AW123102|AW557856|Tel	ets variant 6	protein-coding
unique_peak2-37863-15-21--0.447266868081641-0.448200956659578	chr5	137350145	137351152	+	0	NA	intron (NM_024474, intron 1 of 12)	B4A|SINE|B4	8329	NM_024474	140709	Mm.295020	NM_024474	ENSMUSG00000004415	Col26a1	9430032K24Rik|BC002218|Col26a|Emid2|Emu2	collagen, type XXVI, alpha 1	protein-coding
unique_peak2-37773-0-9--4.16205902536157-2.31132995230379	chr5	115534884	115535309	+	0	NA	intron (NM_029012, intron 6 of 10)	RCHARR1|DNA|MER1_type	22875	NM_001271591	100502825	Mm.361657	NM_001271590		Gm13826	OTTMUSG00000014624	predicted gene 13826	protein-coding
common_peak1-18353-33-19-1.00940946763817-1.9602491241746	chr8	69850491	69851528	+	0	NA	Intergenic	Lx3C|LINE|L1	-163648	NM_008673	17960	Mm.14125	NM_008673	ENSMUSG00000025588	Nat1	Nat-1	N-acetyl transferase 1	protein-coding
common_peak2-26476-11-18--0.739233929191972-0.671582559449692	chr2	78412048	78412670	+	0	NA	Intergenic	Intergenic	-296845	NM_009454	22193	Mm.1485	NM_009454		Ube2e3	Ubce4|ubcM2	ubiquitin-conjugating enzyme E2E 3	protein-coding
common_peak2-30178-9-8-0.0196884049619079-1.03275496310833	chr7	98172614	98173035	+	0	NA	Intergenic	(TGGA)n|Simple_repeat|Simple_repeat	-66472	NM_011807	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
common_peak2-31814-19-19-0.0807592317743238-0.322753776620787	chr9	40801086	40801895	+	0	NA	intron (NM_019465, intron 2 of 9)	MER20|DNA|MER1_type	11221	NM_001281954	54698	Mm.42791	NM_019465	ENSMUSG00000032021	Crtam	-	cytotoxic and regulatory T cell molecule	protein-coding
common_peak1-7938-12-5-1.06381348436648-1.78669045979184	chr1	151692716	151693267	+	0	NA	intron (NM_008869, intron 15 of 17)	intron (NM_008869, intron 15 of 17)	115423	NM_008869	18783	Mm.4186	NM_008869	ENSMUSG00000056220	Pla2g4a	Pla2g4|cPLA2|cPLA2alpha	phospholipase A2, group IVA (cytosolic, calcium-dependent)	protein-coding
common_peak2-21434-68-73-0.360507413669346-0.92842122850166	chr11	86574686	86577267	+	0	NA	Intergenic	Intergenic	-4982	NM_001003908	67300	Mm.254588	NM_001003908	ENSMUSG00000047126	Cltc	3110065L21Rik|CHC|R74732	clathrin, heavy polypeptide (Hc)	protein-coding
common_peak2-21414-10-6-0.549060422951165-1.21398586181642	chr11	83854173	83854543	+	0	NA	exon (NM_194341, exon 20 of 20)	exon (NM_194341, exon 20 of 20)	27501	NM_019819	56405	Mm.240885	NM_019819	ENSMUSG00000018648	Dusp14	1110014C10Rik|2310042C07Rik|D11Ertd395e|MKP-L|Mkp6	dual specificity phosphatase 14	protein-coding
common_peak2-25354-33-59--0.57555303308299-1.09778364124568	chr18	80255054	80256775	+	0	NA	intron (NM_053117, intron 1 of 2)	intron (NM_053117, intron 1 of 2)	12280	NM_053117	93737	Mm.24678	NM_053117	ENSMUSG00000056214	Pard6g	2410049N21Rik|Par6a	par-6 family cell polarity regulator gamma	protein-coding
unique_peak1-3241-12-1-2.64877598508764-3.36932189928148	chr18	64101684	64102211	+	0	NA	intron (NM_001014981, intron 26 of 27)	intron (NM_001014981, intron 26 of 27)	233598	NM_001014981	104082	Mm.30850	NM_001014981	ENSMUSG00000040560	Wdr7	AI462727|TRAG|mKIAA0541	WD repeat domain 7	protein-coding
common_peak2-30809-26-27-0.120544170100858-0.335332249061431	chr7	127875628	127876799	+	0	NA	3' UTR (NM_001164580, exon 3 of 3)	3' UTR (NM_001164580, exon 3 of 3)	-6858	NM_177697	233813	Mm.389939	NM_177697	ENSMUSG00000030889	Vwa3a	E030013G06Rik	von Willebrand factor A domain containing 3A	protein-coding
common_peak2-31384-49-88--0.469449607941214-1.12735745316731	chr8	85840127	85841654	+	0	NA	intron (NM_178736, intron 7 of 8)	intron (NM_178736, intron 7 of 8)	15495	NM_001170691	244548	Mm.38762	NM_178736	ENSMUSG00000035151	Elmod2	9830169G11Rik	ELMO/CED-12 domain containing 2	protein-coding
unique_peak2-37078-3-7--1.41398308995928-1.23214870625617	chr3	148922790	148923200	+	0	NA	Intergenic	Intergenic	-14706	NR_040591	381482	Mm.393866	NR_040591		Gm1653	-	predicted gene 1653	ncRNA
common_peak1-17986-31-35-0.0553136693708112-0.313095283157747	chr7	135608396	135609858	+	0	NA	Intergenic	RLTR15|LTR|ERVK	-4100	NM_009383	21843	Mm.242072	NM_009383	ENSMUSG00000030846	Tial1	5330433G13Rik|AL033329|TIAR|mTIAR	Tia1 cytotoxic granule-associated RNA binding protein-like 1	protein-coding
common_peak2-23915-16-26--0.636623859895407-0.713114929964887	chr16	8470704	8471502	+	0	NA	intron (NM_146247, intron 1 of 10)	intron (NM_146247, intron 1 of 10)	197	NM_146247	239706	Mm.214953	NM_146247		Mettl22	-	methyltransferase like 22	protein-coding
common_peak2-29969-89-89-0.543113658496328-2.05288958315677	chr6	119478789	119480042	+	0	NA	intron (NM_009525, intron 1 of 4)	intron (NM_009525, intron 1 of 4)	14950	NM_009525	22419	Mm.321818	NM_009525	ENSMUSG00000030170	Wnt5b	AW545702|Wnt-5b	wingless-type MMTV integration site family, member 5B	protein-coding
common_peak1-8011-28-19-0.7310310249341-1.12969433525548	chr1	167269028	167270320	+	0	NA	intron (NM_028759, intron 15 of 18)	intron (NM_028759, intron 15 of 18)	43777	NM_001081126	240888	Mm.329929	NM_001081126		Gpr161	Gm208|Gm208Gpr|vl	G protein-coupled receptor 161	protein-coding
common_peak1-11365-45-68--0.248166431433297-0.473550455187116	chr15	93335865	93337572	+	0	NA	intron (NM_001033217, intron 5 of 7)	intron (NM_001033217, intron 5 of 7)	89604	NM_001033217	106042	Mm.150314	NM_001033217	ENSMUSG00000036158	Prickle1	1110058P22Rik|AW215793|Prickle|b2b019Clo|mpk1	prickle homolog 1 (Drosophila)	protein-coding
unique_peak2-33847-2-8--2.08737925770563-1.65811743852845	chr12	16999476	16999927	+	0	NA	TTS (NM_001161111)	TTS (NM_001161111)	7223	NM_172574	217430	Mm.379451	NM_172574	ENSMUSG00000045679	Pqlc3	C78076|E030024M05Rik	PQ loop repeat containing	protein-coding
common_peak2-20438-17-24--0.425559851569687-0.427564438475253	chr10	34206750	34207812	+	0	NA	intron (NM_010237, intron 2 of 8)	L1Md_F3|LINE|L1	4075	NM_010237	14302	Mm.332432	NM_010237	ENSMUSG00000019779	Frk	BSK|BSK/IYK|C85044|GTK|RAK	fyn-related kinase	protein-coding
common_peak2-24963-7-6--0.00826409175941478-0.97990265578305	chr18	5380646	5380933	+	0	NA	Intergenic	Intergenic	-46352	NM_178722	240186	Mm.118257	NM_178722	ENSMUSG00000050945	Zfp438	9430031G09|9430091M14Rik|B830013J05Rik	zinc finger protein 438	protein-coding
unique_peak1-2570-17-4-1.89636824331768-2.60953805094651	chr16	25483622	25484277	+	0	NA	Intergenic	Intergenic	197046	NM_175165	71338	Mm.126851	NM_175165	ENSMUSG00000048399	Tprg	5430420C16Rik|Tprg1	transformation related protein 63 regulated	protein-coding
common_peak1-18027-23-24-0.0779113147343562-0.318406410381916	chr7	142437032	142438458	+	0	NA	Intergenic	Intergenic	-22557	NM_001163611	100043254	Mm.192092	NM_001163611	ENSMUSG00000073804	Nps	ENSMUSG00000073804	neuropeptide S	protein-coding
unique_peak2-38801-5-5--0.289342836727009-0.909929411522249	chr7	131371278	131371677	+	0	NA	intron (NM_001252072, intron 1 of 1)	intron (NM_001252072, intron 1 of 1)	244782	NM_001252072	628779	Mm.40210	NM_001252072	ENSMUSG00000078591	Hs3st4	EG628779|Gm6915	heparan sulfate (glucosamine) 3-O-sulfotransferase 4	protein-coding
unique_peak2-37139-2-5--1.50241675698448-1.08602067057793	chr4	21847072	21847422	+	0	NA	Intergenic	RMER1C|Other|Other	-11226	NM_175234	76132	Mm.159689	NM_175234		Faxc	6230409E13Rik|AW742931	failed axon connections homolog (Drosophila)	protein-coding
unique_peak2-37088-5-23--2.28934283672701-3.02403524675804	chr3	152323787	152324788	+	0	NA	intron (NM_001081277, intron 1 of 13)	intron (NM_001081277, intron 1 of 13)	-5590	NR_040386	99542	Mm.394921	NR_040386	ENSMUSG00000097745	AI115009	-	expressed sequence AI115009	ncRNA
common_peak2-22144-11-28--1.34928741087596-1.9654245668484	chr12	86078990	86079809	+	0	NA	Intergenic	L1Md_A|LINE|L1	34663	NM_023409	67963	Mm.282556	NM_023409	ENSMUSG00000021242	Npc2	2700012J19Rik|AA408070|AU045843|HE1	Niemann-Pick type C2	protein-coding
common_peak1-9838-12-19--0.673152109799724-0.546772548767014	chr12	76594057	76594608	+	0	NA	intron (NM_012024, intron 4 of 13)	intron (NM_012024, intron 4 of 13)	-76564	NM_175644	217674	Mm.252250	NM_175644	ENSMUSG00000048982	Gphb5	Zlut1	glycoprotein hormone beta 5	protein-coding
unique_peak2-37051-6-7--0.434601889619698-0.97990265578305	chr3	135680417	135680809	+	0	NA	Intergenic	Intergenic	-177380	NR_040540	71038	Mm.410798	NR_040540		4933401H06Rik	-	RIKEN cDNA 4933401H06 gene	ncRNA
unique_peak1-5926-10-1-2.35641534500877-2.57096726280955	chr6	89428842	89429316	+	0	NA	intron (NM_025351, intron 4 of 7)	(GA)n|Simple_repeat|Simple_repeat	-116472	NM_008881	18844	Mm.3789	NM_008881	ENSMUSG00000030084	Plxna1	2600013D04Rik|NOV|PlexA1|Plxn1|mKIAA4053	plexin A1	protein-coding
unique_peak2-39396-1-5--2.2120195109379-1.32905871926422	chr9	28562971	28563405	+	0	NA	intron (NM_177906, intron 3 of 7)	intron (NM_177906, intron 3 of 7)	964334	NM_177906	330908	Mm.379474	NM_177906	ENSMUSG00000062257	Opcml	2900075O15Rik|3732419F12|AI844366|B930023M13Rik|C230027C17|Gm181|Obcam	opioid binding protein/cell adhesion molecule-like	protein-coding
unique_peak1-5372-14-0-3.89921616035764-4.8164799306237	chr5	99036643	99037160	+	0	NA	intron (NM_001024614, intron 3 of 5)	intron (NM_001024614, intron 3 of 5)	-132218	NR_030484	735265		NR_030484		Mir703	Mirn703|mmu-mir-703	microRNA 703	ncRNA
common_peak1-12364-24-55--1.01414501928989-2.24341076832583	chr17	62880427	62881690	+	0	NA	Intergenic	Intergenic	349608	NM_207654	13640	Mm.7978	NM_010109		Efna5	AL-1|AV158822|EFL-5|Ephrin-A5|Epl7|LERK-7|RAGS	ephrin A5	protein-coding
common_peak2-22164-8-8--0.164702583494742-1.00793137938329	chr12	88360694	88361087	+	0	NA	Intergenic	L1MCa|LINE|L1	-6624	NM_172583	217733	Mm.110032	NM_172583	ENSMUSG00000034145	Tmem63c	4932420N09|9330187M14Rik	transmembrane protein 63c	protein-coding
common_peak2-28509-18-11-0.727956650507195-0.876666802405043	chr5	36077196	36077718	+	0	NA	Intergenic	Intergenic	-5532	NM_194344	231147	Mm.290429	NM_194344	ENSMUSG00000036553	Sh3tc1	4631428G15|BC024909	SH3 domain and tetratricopeptide repeats 1	protein-coding
unique_peak2-36110-2-12--2.61789397440441-2.55640854263862	chr2	142901114	142901566	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	-2888	NM_020595	57329	Mm.157751	NM_020595	ENSMUSG00000027416	Otor	CDRAP|Fdp|MIA|MIAL	otoraplin	protein-coding
unique_peak2-36416-5-8--0.874305337448166-1.10484139239135	chr2	127788585	127788990	+	0	NA	intron (NM_028765, intron 9 of 17)	ORR1B1|LTR|MaLR	108423	NM_028765	74121	Mm.244835	NM_028765	ENSMUSG00000027380	Acoxl	1200014P05Rik|AV025673	acyl-Coenzyme A oxidase-like	protein-coding
common_peak2-22226-26-32--0.116495027199991-0.315041925765944	chr12	117843507	117844194	+	0	NA	intron (NM_011215, intron 2 of 22)	HAL1-2a_MD|LINE|L1	119657	NM_011215	19276	Mm.206054	NM_011215	ENSMUSG00000056553	Ptprn2	4930425H11Rik|IA2beta|PTP-NP|Phol|mKIAA0387|phogrin	protein tyrosine phosphatase, receptor type, N polypeptide 2	protein-coding
common_peak2-25377-16-14-0.211373046659543-0.364171515310935	chr18	84398873	84399660	+	0	NA	intron (NM_001033341, intron 8 of 8)	(TGAA)n|Simple_repeat|Simple_repeat	141716	NM_146090	225791	Mm.147052	NM_146090	ENSMUSG00000049090	Zadh2	C530046K17Rik|Pthr3	zinc binding alcohol dehydrogenase, domain containing 2	protein-coding
unique_peak2-33725-1-7--2.62705701021674-1.80617997398389	chr11	115276572	115276873	+	0	NA	TTS (NM_027862)	TTS (NM_027862)	4511	NM_027862	71679	Mm.371641	NM_027862	ENSMUSG00000034566	Atp5h	0610009D10Rik	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit D	protein-coding
common_peak2-23385-8-9--0.316705676939792-1.03275496310833	chr15	57976540	57976921	+	0	NA	intron (NM_029734, intron 1 of 5)	MTEa|LTR|MaLR	3739	NM_029734	76773	Mm.26771	NM_029734	ENSMUSG00000022359	Wdyhv1	2410187C16Rik|AU014961|AW550036|Ntaq1	WDYHV motif containing 1	protein-coding
unique_peak1-6910-7-0-2.79909083029819-2.40823996531185	chr8	105804982	105805464	+	0	NA	Intergenic	RMER10B|LTR|ERVL	66211	NR_036588	69794	Mm.396139	NR_036588		1600027J07Rik	-	RIKEN cDNA 1600027J07 gene	ncRNA
common_peak1-13095-39-51--0.0846784712219382-0.309716464454027	chr19	7340741	7342070	+	0	NA	Intergenic	Intergenic	-2849	NM_054048	104383	Mm.283859	NM_054048	ENSMUSG00000024968	Rcor2	1A13|AW122124|CoREST|Rcor|Rcor1	REST corepressor 2	protein-coding
unique_peak2-36338-3-6--1.22133801201688-1.08602067057793	chr2	91298893	91299320	+	0	NA	intron (NM_172668, intron 1 of 37)	intron (NM_172668, intron 1 of 37)	1418	NM_001145857	228357	Mm.275149	NM_172668	ENSMUSG00000027253	Lrp4	6430526J12Rik|D230026E03|Megf7|mdig	low density lipoprotein receptor-related protein 4	protein-coding
unique_peak2-33382-0-5--3.42509343119537-1.32905871926422	chr11	45955258	45955552	+	0	NA	intron (NM_009616, intron 21 of 22)	intron (NM_009616, intron 21 of 22)	24456	NM_172524	214112	Mm.225253	NM_172524	ENSMUSG00000020411	Nipal4	9530066K23Rik	NIPA-like domain containing 4	protein-coding
unique_peak2-33900-3-6--1.22133801201688-1.08602067057793	chr12	54188162	54188563	+	0	NA	intron (NM_198111, intron 11 of 13)	intron (NM_198111, intron 11 of 13)	-161302	NM_013780	27386	Mm.247044	NM_013780	ENSMUSG00000021010	Npas3	4930423H22Rik|bHLHe12	neuronal PAS domain protein 3	protein-coding
common_peak1-16758-51-24-1.43106763582785-4.89407448190067	chr6	34608153	34609986	+	0	NA	Intergenic	Intergenic	-50375	NM_145575	109624	Mm.308134	NM_145575	ENSMUSG00000029761	Cald1	4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik	caldesmon 1	protein-coding
common_peak1-17561-20-19-0.16614668970383-0.348739088570342	chr7	34132689	34133510	+	0	NA	Intergenic	IAPEY3-int|LTR|ERVK	18239	NM_001009952	494519	Mm.389857	NM_001009952	ENSMUSG00000094305	Scgb2b20	Abpbg20|Abpd|C2c|Scgb2b2	secretoglobin, family 2B, member 20	protein-coding
common_peak2-23529-44-83--0.570424588210225-1.35565283421423	chr15	77820843	77822429	+	0	NA	Intergenic	Intergenic	-20382	NM_018749	55944	Mm.3955	NM_018749	ENSMUSG00000016554	Eif3d	66/67kDa|AA407891|Eif3s7|eIF3p66	eukaryotic translation initiation factor 3, subunit D	protein-coding
unique_peak1-338-8-3-1.00522241794757-1.39487600375387	chr1	134101539	134102006	+	0	NA	intron (NM_001033250, intron 1 of 3)	intron (NM_001033250, intron 1 of 3)	7107	NR_029777	723818		NR_029777	miRBase:MI0000646	Mir135b	Mirn135b	microRNA 135b	ncRNA
common_peak1-14315-15-11-0.4272022498345-0.503257505534083	chr2	163494323	163495031	+	0	NA	intron (NM_001039390, intron 2 of 4)	L1_Mus2|LINE|L1	10483	NM_001164053	18769	Mm.10091	NM_011106	ENSMUSG00000035268	Pkig	PKIgamma	protein kinase inhibitor, gamma	protein-coding
common_peak1-17052-20-20-0.0957573618124323-0.321718508207528	chr6	97210761	97211631	+	0	NA	Intergenic	B1_Mur3|SINE|Alu	-8422	NM_001081157	320502	Mm.68163	NM_001081157	ENSMUSG00000044086	Lmod3	5430424A14Rik	leiomodin 3 (fetal)	protein-coding
common_peak2-24267-43-60--0.148174152039184-0.348250801558508	chr16	94317146	94318133	+	0	NA	intron (NM_011377, intron 7 of 10)	intron (NM_011377, intron 7 of 10)	191824	NM_139145	110948	Mm.30921	NM_139145	ENSMUSG00000040820	Hlcs	410I21.SP6|D16Jhu34	holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase)	protein-coding
unique_peak1-5652-9-6-0.382258484346616-1.11707584880836	chr6	29853817	29854330	+	0	NA	intron (NM_021414, intron 13 of 16)	intron (NM_021414, intron 13 of 16)	-12940	NM_001037740	320609	Mm.56097	NM_177204	ENSMUSG00000039629	Strip2	D330017J20Rik|Fam40b	striatin interacting protein 2	protein-coding
common_peak2-26719-11-33--1.57876925699873-2.80071159219767	chr2	130449883	130450648	+	0	NA	intron (NM_198176, intron 2 of 2)	B1_Mus2|SINE|Alu	5498	NM_198176	380601	Mm.27090	NM_198176		Fastkd5	C78212|mKIAA1792	FAST kinase domains 5	protein-coding
common_peak1-14972-33-21-0.871905943888232-1.60774463804084	chr3	106482366	106483268	+	0	NA	Intergenic	Lx2|LINE|L1	-5088	NM_001039478	321000	Mm.259638	NM_028081	ENSMUSG00000056260	Lrif1	2010012G17Rik|4933421E11Rik|AI450568	ligand dependent nuclear receptor interacting factor 1	protein-coding
common_peak2-21338-25-16-0.774387064094767-1.1282783422172	chr11	76406908	76407713	+	0	NA	Intergenic	Intergenic	-16069	NM_198894	109934	Mm.258939	NM_198018	ENSMUSG00000017631	Abr	-	active BCR-related gene	protein-coding
unique_peak1-230-11-11--0.0762689164695427-0.301029995663976	chr1	89104397	89104955	+	0	NA	intron (NM_009604, intron 5 of 11)	intron (NM_009604, intron 5 of 11)	2290	NM_009604	11449	Mm.2810	NM_009604	ENSMUSG00000026253	Chrng	Achr-3|Acrg	cholinergic receptor, nicotinic, gamma polypeptide	protein-coding
unique_peak1-2886-8-2-1.42025991722641-1.65811743852845	chr17	42931807	42932257	+	0	NA	3' UTR (NM_009847, exon 18 of 18)	3' UTR (NM_009847, exon 18 of 18)	-52904	NM_001033493	435529	Mm.136350	NM_001033493	ENSMUSG00000057899	Gpr111	PGR20	G protein-coupled receptor 111	protein-coding
common_peak2-20812-31-65--0.81915544854533-1.99170400593892	chr10	127642293	127643997	+	0	NA	intron (NM_001285779, intron 12 of 17)	B3|SINE|B2	5705	NM_025716	66701	Mm.29694	NM_025716	ENSMUSG00000051346	Spryd4	4633402N23Rik|AA114801	SPRY domain containing 4	protein-coding
unique_peak1-7041-9-1-2.18961340640422-2.31132995230379	chr8	127959567	127960083	+	0	NA	intron (NM_001081337, intron 16 of 20)	intron (NM_001081337, intron 16 of 20)	56785	NM_001081337	244668	Mm.271668	NM_001081337	ENSMUSG00000001995	Sipa1l2	BC058408|mKIAA1389	signal-induced proliferation-associated 1 like 2	protein-coding
unique_peak1-6993-16-0-4.11826364226806-5.41853992195166	chr8	121450634	121451325	+	0	NA	intron (NM_019707, intron 5 of 13)	CT-rich|Low_complexity|Low_complexity	-417459	NM_024219	68196	Mm.358714	NM_024219	ENSMUSG00000031839	Hsbp1	0610007A03Rik|AA408769|Hsp25	heat shock factor binding protein 1	protein-coding
common_peak2-20797-14-27--0.908138761699959-1.05601013496724	chr10	122096521	122097259	+	0	NA	Intergenic	Intergenic	-18928	NM_176919	319468	Mm.489703	NM_176919	ENSMUSG00000034613	Ppm1h	A430075L18Rik|ARHCL1|C030002B11Rik	protein phosphatase 1H (PP2C domain containing)	protein-coding
common_peak1-19253-9-31--1.81038659359578-3.08022526292111	chr9	110531799	110532320	+	0	NA	intron (NM_183276, intron 38 of 53)	intron (NM_183276, intron 38 of 53)	-5162	NM_026012	67169	Mm.46680	NM_026012	ENSMUSG00000032491	Nradd	2610311B09Rik|BB104149|NRDD|NRH2|PLAIDD	neurotrophin receptor associated death domain	protein-coding
common_peak2-22236-11-11--0.0762689164695427-0.301029995663976	chr13	23740317	23740885	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-26174	NM_015787	50709	Mm.170587	NM_015787		Hist1h1e	H1-4|H1e|H1f4|H1s-4|H1var2	histone cluster 1, H1e	protein-coding
common_peak1-17983-14-25--0.801223557783447-0.84969927174089	chr7	134670557	134671196	+	0	NA	promoter-TSS (NR_034045)	promoter-TSS (NR_034045)	-535	NR_034045	100217442	Mm.451113	NR_034045		Snora30	MBI-26	small nucleolar RNA, H/ACA box 30	snoRNA
unique_peak2-34475-1-5--2.2120195109379-1.32905871926422	chr14	32116995	32117428	+	0	NA	intron (NM_001033668, intron 14 of 77)	intron (NM_001033668, intron 14 of 77)	19871	NM_001033668	110084	Mm.101811	NM_001033668	ENSMUSG00000019027	Dnah1	B230373P09Rik|Dnahc1|E030034C22Rik|MDHC7	dynein, axonemal, heavy chain 1	protein-coding
common_peak1-17462-16-14-0.211373046659543-0.364171515310935	chr7	19309933	19310660	+	0	NA	intron (NM_001004152, intron 4 of 4)	intron (NM_001004152, intron 4 of 4)	6857	NM_001004152	243862	Mm.389833	NM_001004152	ENSMUSG00000044903	Psg22	AA408604|cea9	pregnancy-specific glycoprotein 22	protein-coding
unique_peak1-5376-13-7-0.778472030637769-0.817533494790411	chr5	99244124	99244810	+	0	NA	Intergenic	MTD-int|LTR|MaLR	-38991	NM_173404	110075	Mm.209571	NM_173404	ENSMUSG00000029335	Bmp3	9130206H07|9530029I04Rik	bone morphogenetic protein 3	protein-coding
common_peak2-21210-10-11--0.228547155712387-0.31137425193576	chr11	61643704	61644215	+	0	NA	intron (NM_013881, intron 8 of 26)	intron (NM_013881, intron 8 of 26)	24635	NM_013881	29869	Mm.162025	NM_013881	ENSMUSG00000004798	Ulk2	A830085I22Rik|AU015340|Unc51.2|mKIAA0623	unc-51 like kinase 2	protein-coding
common_peak1-11479-72-68-0.560059356094149-1.78763620797383	chr15	102044065	102046847	+	0	NA	TTS (NM_013566)	TTS (NM_013566)	10454	NM_001289695	68744	Mm.352945	NM_153194	ENSMUSG00000046897	Zfp740	1110034O07Rik|AW548228|Znf740	zinc finger protein 740	protein-coding
unique_peak2-36471-9-16--0.897849434846119-0.732381977911291	chr2	146511461	146512124	+	0	NA	Intergenic	LTR88b|LTR|Gypsy?	143125	NR_040502	74065	Mm.399508	NR_040502	ENSMUSG00000085796	4933406D12Rik	-	RIKEN cDNA 4933406D12 gene	ncRNA
common_peak1-12354-29-22-0.588728124558098-0.950553505527076	chr17	56613188	56614005	+	0	NA	intron (NM_001252455, intron 1 of 27)	CpG	2307	NM_001252455	19280	Mm.258771	NM_011218	ENSMUSG00000013236	Ptprs	AL022616|PTP|PTP-NU3|PTPNU-3|PTPsigma|Ptpt9|R-PTP-S|RPTPsigma	protein tyrosine phosphatase, receptor type, S	protein-coding
common_peak2-27425-21-42--0.856775489435862-1.3806499615138	chr3	89164775	89165454	+	0	NA	intron (NM_029974, intron 3 of 15)	PB1|SINE|Alu	4047	NM_029974	77772	Mm.164013	NM_029974	ENSMUSG00000042672	Dcst1	A330106H01Rik	DC-STAMP domain containing 1	protein-coding
common_peak2-25342-20-19-0.16614668970383-0.348739088570342	chr18	77944422	77945134	+	0	NA	intron (NM_178670, intron 1 of 4)	B1_Mur1|SINE|Alu	7971	NM_178670	212163	Mm.23293	NM_178670	ENSMUSG00000047466	8030462N17Rik	Akd2|Ark2N	RIKEN cDNA 8030462N17 gene	protein-coding
unique_peak2-36995-6-7--0.434601889619698-0.97990265578305	chr3	121584468	121584807	+	0	NA	Intergenic	Intergenic	-66504	NM_008991	19299	Mm.399042	NM_008991	ENSMUSG00000028127	Abcd3	AI313901|AU018866|AW146054|PMP68|PMP70|Pxmp1	ATP-binding cassette, sub-family D (ALD), member 3	protein-coding
common_peak1-18303-29-45--0.411271875441902-0.573175361577109	chr8	46163011	46164357	+	0	NA	intron (NM_008639, intron 1 of 1)	B3|SINE|B2	9120	NM_008639	17773	Mm.5133	NM_008639	ENSMUSG00000054764	Mtnr1a	MR|MelR	melatonin receptor 1A	protein-coding
common_peak1-17219-25-20-0.469532482566345-0.662033714151238	chr6	125480759	125481906	+	0	NA	Intergenic	Intergenic	-21634	NM_011708	22371	Mm.22339	NM_011708	ENSMUSG00000001930	Vwf	6820430P06Rik|AI551257|B130011O06Rik|C630030D09|F8VWF|VWD	Von Willebrand factor homolog	protein-coding
unique_peak2-36926-2-4--1.23938235115068-0.931118710592187	chr3	101527219	101527624	+	0	NA	Intergenic	RMER17D2|LTR|ERVK	112725	NM_172295	242125	Mm.32900	NM_172295	ENSMUSG00000044313	Mab21l3	-	mab-21-like 3 (C. elegans)	protein-coding
common_peak2-21539-11-10-0.0492619656143161-0.31137425193576	chr11	95800783	95801287	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	23662	NR_037223	100526468		NR_037223	miRBase:MI0014025	Mir3063	mmu-mir-3063	microRNA 3063	ncRNA
unique_peak1-6063-19-8-1.23276232521937-1.61268301619756	chr6	116639295	116640424	+	0	NA	Intergenic	MERVL-int|LTR|ERVL	-16005	NM_178045	213391	Mm.257931	NM_178045	ENSMUSG00000042129	Rassf4	3830411C14Rik|AD037|AI586137	Ras association (RalGDS/AF-6) domain family member 4	protein-coding
unique_peak2-36192-2-6--1.72480917832092-1.26211192963361	chr2	31042647	31043070	+	0	NA	intron (NM_178760, intron 12 of 17)	intron (NM_178760, intron 12 of 17)	35022	NM_178760	277463	Mm.236074	NM_178760		Gpr107	9930033D15Rik|AI790205|C530034M11|mKIAA1624	G protein-coupled receptor 107	protein-coding
common_peak2-22523-17-37--1.02963117523855-1.57996244908225	chr13	55099740	55100536	+	0	NA	intron (NM_153131, intron 7 of 15)	MLT1A1|LTR|MaLR	22042	NM_001206390	212032	Mm.267479	NM_001033245	ENSMUSG00000025877	Hk3	HK III|HK-III	hexokinase 3	protein-coding
unique_peak1-6426-8-1-2.00522241794757-2.05605744720049	chr7	91845692	91846153	+	0	NA	intron (NR_038175, intron 1 of 4)	Lx|LINE|L1	7772	NR_038175	72495	Mm.382914	NR_038175		2610206C17Rik	-	RIKEN cDNA 2610206C17 gene	ncRNA
unique_peak1-7173-13-7-0.778472030637769-0.817533494790411	chr9	61290195	61290839	+	0	NA	Intergenic	GA-rich|Low_complexity|Low_complexity	70344	NM_001083927	21887	Mm.24255	NM_009389	ENSMUSG00000032280	Tle3	2610103N05Rik|ESG|Grg3a|Grg3b|mKIAA1547	transducin-like enhancer of split 3, homolog of Drosophila E(spl)	protein-coding
unique_peak1-7167-9-2-1.60465090568306-1.87199725847353	chr9	59533623	59534164	+	0	NA	Intergenic	L1MC5|LINE|L1	-21678	NM_001033498	546134	Mm.297580	NM_001033498	ENSMUSG00000074259	Gramd2	BC064463	GRAM domain containing 2	protein-coding
common_peak1-17555-19-41--0.989630096117074-1.72734829286054	chr7	30588187	30588928	+	0	NA	Intergenic	ORR1A1|LTR|MaLR	-12534	NM_146185	233056	Mm.224766	NM_146185	ENSMUSG00000011427	Zfp790	6330581L23Rik	zinc finger protein 790	protein-coding
common_peak2-24061-47-46-0.38025257308891-0.759155512401768	chr16	29813544	29814403	+	0	NA	Intergenic	CpG	165237	NR_037689	328657	Mm.425982	NM_001033403		Gm1968	-	predicted gene 1968	ncRNA
common_peak1-17326-55-62-0.227339947652785-0.531249876599846	chr6	146577132	146578490	+	0	NA	intron (NM_026281, intron 1 of 11)	intron (NM_026281, intron 1 of 11)	5303	NM_026281	67623	Mm.278037	NM_026281	ENSMUSG00000040234	Tm7sf3	2010003B14Rik|NARP1	transmembrane 7 superfamily member 3	protein-coding
common_peak2-27692-45-43-0.400926406707574-0.786568022251753	chr3	121576998	121577981	+	0	NA	Intergenic	Intergenic	-59356	NM_008991	19299	Mm.399042	NM_008991	ENSMUSG00000028127	Abcd3	AI313901|AU018866|AW146054|PMP68|PMP70|Pxmp1	ATP-binding cassette, sub-family D (ALD), member 3	protein-coding
unique_peak2-34494-5-23--2.28934283672701-3.02403524675804	chr14	46387668	46388591	+	0	NA	Intergenic	RMER10B|LTR|ERVL	-110311	NM_001042719	114874	Mm.121918	NM_176845	ENSMUSG00000037697	Ddhd1	PA-PLA1	DDHD domain containing 1	protein-coding
common_peak2-30033-10-7-0.356415345008769-1.12966497611638	chr6	125434079	125434478	+	0	NA	intron (NM_007657, intron 1 of 7)	intron (NM_007657, intron 1 of 7)	10495	NM_007657	12527	Mm.210676	NM_007657	ENSMUSG00000030342	Cd9	Tspan29	CD9 antigen	protein-coding
unique_peak1-7364-14-2-2.31425365963649-3.28500101358144	chrX	42050019	42050735	+	0	NA	Intergenic	Intergenic	92961	NM_001190718	245404	Mm.55685	NM_178739	ENSMUSG00000045284	Dcaf12l1	9330180J20|A230038L21Rik|Decaf12l1|Wdr40b	DDB1 and CUL4 associated factor 12-like 1	protein-coding
unique_peak1-2613-7-3-0.799090830298189-1.23214870625617	chr16	33872725	33873099	+	0	NA	intron (NM_010580, intron 3 of 14)	intron (NM_010580, intron 3 of 14)	43161	NM_001145884	16419	Mm.6424	NM_010580	ENSMUSG00000022817	Itgb5	AA475909|AI874634|ESTM23|[b]-5|[b]5|[b]5A|[b]5B|beta-5|beta5	integrin beta 5	protein-coding
unique_peak2-37060-0-9--4.16205902536157-2.31132995230379	chr3	138760237	138760645	+	0	NA	Intergenic	Intergenic	-22276	NM_001040690	229877	Mm.28893	NM_145544	ENSMUSG00000028149	Rap1gds1	BC011279|GDS1	RAP1, GTP-GDP dissociation stimulator 1	protein-coding
unique_peak1-2276-13-1-2.77847203063777-3.64038867156802	chr15	78541414	78542016	+	0	NA	intron (NM_183141, intron 1 of 1)	GA-rich|Low_complexity|Low_complexity	6828	NM_183141	207393	Mm.323188	NM_183141	ENSMUSG00000043460	Elfn2	6330514E13|AW048948|BC094219|Lrrc62|Ppp1r29	leucine rich repeat and fibronectin type III, extracellular 2	protein-coding
unique_peak1-2632-9-1-2.18961340640422-2.31132995230379	chr16	43235379	43235920	+	0	NA	intron (NM_001285805, intron 3 of 10)	intron (NM_001285805, intron 3 of 10)	-11748	NM_181058	56490	Mm.136238	NM_019778	ENSMUSG00000022708	Zbtb20	1300017A20Rik|7330412A13Rik|A930017C21Rik|D16Wsu73e|DPZF|HOF|ODA-8S|Oda8|Zfp288	zinc finger and BTB domain containing 20	protein-coding
unique_peak2-33144-0-8--4.01005593191652-2.05605744720049	chr10	84434519	84435034	+	0	NA	intron (NM_001013441, intron 6 of 8)	ID_B1|SINE|B4	54418	NM_183172	237422	Mm.18936	NM_183172		Ric8b	BC051080|Ric-8|Ric-8b	resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)	protein-coding
unique_peak1-5014-12-4-1.32684789020028-2.04196296489515	chr4	125122143	125122675	+	0	NA	Intergenic	Intergenic	-45666	NM_001081097	14807	Mm.40896	NM_001081097	ENSMUSG00000001985	Grik3	9630027E11|GluK3|GluR7-3|Glur-7|Glur7	glutamate receptor, ionotropic, kainate 3	protein-coding
unique_peak2-34677-7-6--0.00826409175941478-0.97990265578305	chr15	8277766	8278174	+	0	NA	intron (NM_027707, intron 22 of 46)	intron (NM_027707, intron 22 of 46)	116493	NM_027707	71175	Mm.240329	NM_027707	ENSMUSG00000022141	Nipbl	Idn3	Nipped-B homolog (Drosophila)	protein-coding
unique_peak2-34146-3-17--2.58390809140159-2.65002542325363	chr13	23757029	23757583	+	0	NA	Intergenic	Intergenic	18522	NM_178189	319164	Mm.261973	NM_178189	ENSMUSG00000069270	Hist1h2ac	-	histone cluster 1, H2ac	protein-coding
common_peak2-22431-10-26--1.3984721571547-1.90052685918624	chr13	38037272	38038039	+	0	NA	intron (NM_001177869, intron 10 of 11)	intron (NM_001177869, intron 10 of 11)	48404	NM_025965	107513	Mm.426670	NM_025965	ENSMUSG00000021427	Ssr1	2510001K09Rik|6330400D04|AI159733|AI452176|SSR|TRAPA	signal sequence receptor, alpha	protein-coding
common_peak1-7699-50-66--0.0251488739788197-0.30102999566397	chr1	82839055	82840289	+	0	NA	intron (NM_010472, intron 1 of 12)	intron (NM_010472, intron 1 of 12)	3614	NM_010472	15463	Mm.392569	NM_010472	ENSMUSG00000026159	Agfg1	AU045498|C130049H11Rik|C85612|D730048C23Rik|Hrb|RAB|Rip	ArfGAP with FG repeats 1	protein-coding
common_peak2-19875-76-115--0.0960366092642904-0.335932833736598	chr1	93477852	93480120	+	0	NA	Intergenic	ID_B1|SINE|B4	41329	NM_023046	65247	Mm.234152	NM_023046	ENSMUSG00000026311	Asb1	1700029O08Rik|1700054C17Rik|AI426616|AI851378|mKIAA1146	ankyrin repeat and SOCS box-containing 1	protein-coding
common_peak2-21573-19-16-0.315224485411347-0.448200956659575	chr11	97662606	97663565	+	0	NA	intron (NM_010688, intron 1 of 6)	intron (NM_010688, intron 1 of 6)	2099	NM_010688	16796	Mm.271967	NM_010688	ENSMUSG00000038366	Lasp1	AA408629|Def-4|SH3P6|Tg(Col1a1-lacZ)1Ngma	LIM and SH3 protein 1	protein-coding
common_peak1-17055-24-17-0.623284901325404-0.890873221665474	chr6	97349547	97350507	+	0	NA	intron (NM_145148, intron 5 of 23)	(TC)n|Simple_repeat|Simple_repeat	-147253	NM_001081157	320502	Mm.68163	NM_001081157	ENSMUSG00000044086	Lmod3	5430424A14Rik	leiomodin 3 (fetal)	protein-coding
common_peak2-22637-36-79--0.842607008719608-2.35156382971582	chr13	91459931	91461085	+	0	NA	Intergenic	Lx8|LINE|L1	67182	NR_045161	320297	Mm.375866	NR_045161	ENSMUSG00000097182	A830009L08Rik	-	RIKEN cDNA A830009L08 gene	ncRNA
common_peak1-7736-43-67--0.304899655726636-0.557749827489198	chr1	89107473	89109350	+	0	NA	TTS (NM_009604)	TTS (NM_009604)	-2078	NM_023314	26987	Mm.227183	NM_023314	ENSMUSG00000026254	Eif4e2	2700069E09Rik|AI036339|AV129531|D0H0S6743E|Eif4el3	eukaryotic translation initiation factor 4E member 2	protein-coding
common_peak1-14219-14-16--0.188246680892695-0.308035960714963	chr2	151973778	151974443	+	0	NA	intron (NM_009328, intron 1 of 1)	B1F2|SINE|Alu	4765	NM_009328	21407	Mm.3881	NM_009328	ENSMUSG00000068079	Tcf15	Meso1|bHLH-EC2	transcription factor 15	protein-coding
common_peak2-26129-22-5-2.06232160436625-3.46164246247458	chr2	7080757	7081184	+	0	NA	intron (NM_001110231, intron 3 of 15)	intron (NM_001110231, intron 3 of 15)	-78622	NM_001160292	14007	Mm.398543	NM_010160	ENSMUSG00000002107	Celf2	B230218O03|B230345P09Rik|C88023|CELF-2|CUG-BP2|Cugbp2|D230046B21Rik|Etr-3|Napor|Napor-2|mETR-3	CUGBP, Elav-like family member 2	protein-coding
unique_peak2-39362-1-4--1.94898510510411-1.10720996964787	chr9	8134059	8134448	+	0	NA	promoter-TSS (NM_001045524)	promoter-TSS (NM_001045524)	41	NM_001045524	234915	Mm.101341	NM_001045524	ENSMUSG00000040729	AK129341	Kiaa1377|mKIAA1377	cDNA sequence AK129341	protein-coding
unique_peak1-4008-11-6-0.701338662194009-1.32595962126035	chr2	35696922	35697458	+	0	NA	intron (NM_029774, intron 6 of 9)	intron (NM_029774, intron 6 of 9)	22480	NR_040618	77665	Mm.400558	NR_040618	ENSMUSG00000086449	9030204H09Rik	-	RIKEN cDNA 9030204H09 gene	ncRNA
common_peak2-25329-39-43-0.156329628281856-0.386060992278541	chr18	76052941	76054115	+	0	NA	intron (NM_145356, intron 1 of 4)	intron (NM_145356, intron 1 of 4)	73696	NM_145356	207259	Mm.159332	NM_145356	ENSMUSG00000044646	Zbtb7c	B230208J24Rik|Kr-pok|Zbtb36	zinc finger and BTB domain containing 7C	protein-coding
unique_peak2-33235-6-11--1.01956439034085-1.32595962126035	chr10	121365082	121365668	+	0	NA	intron (NM_001242411, intron 2 of 21)	intron (NM_001242411, intron 2 of 21)	118996	NM_001242411	117600	Mm.288698	NM_001081037	ENSMUSG00000020121	Srgap1	4930572H05Rik|Arhgap13	SLIT-ROBO Rho GTPase activating protein 1	protein-coding
unique_peak2-33594-5-8--0.874305337448166-1.10484139239135	chr11	88495259	88495694	+	0	NA	intron (NM_054043, intron 5 of 13)	intron (NM_054043, intron 5 of 13)	84067	NM_054043	76626	Mm.400451	NM_054043	ENSMUSG00000069769	Msi2	1700105C15Rik|AI451722|AI563628|AW489193|Msi2h	musashi RNA-binding protein 2	protein-coding
unique_peak1-6286-8-7-0.00522241794757061-1.00793137938329	chr7	28939447	28940068	+	0	NA	exon (NM_001164655, exon 13 of 20)	exon (NM_001164655, exon 13 of 20)	-15010	NM_007991	14113	Mm.4595	NM_007991	ENSMUSG00000046865	Fbl	AL022665|FIB|FLRN|RNU3IP1	fibrillarin	protein-coding
unique_peak2-38574-10-12--0.344024373132323-0.340565874754526	chr7	66478753	66479459	+	0	NA	Intergenic	L1_Rod|LINE|L1	-5014	NM_173010	22215	Mm.9002	NM_011668	ENSMUSG00000025326	Ube3a	4732496B02|5830462N02Rik|A130086L21Rik|Hpve6a|mKIAA4216	ubiquitin protein ligase E3A	protein-coding
unique_peak1-4638-8-2-1.42025991722641-1.65811743852845	chr3	87516385	87516877	+	0	NA	intron (NM_001003912, intron 15 of 39)	RSINE1|SINE|B4	35914	NM_028971	74485	Mm.474494	NM_028971	ENSMUSG00000023084	Lrrc71	4933430H15Rik	leucine rich repeat containing 71	protein-coding
common_peak2-25774-25-50--0.810575436626389-1.52790159704429	chr19	32388541	32390124	+	0	NA	intron (NM_144792, intron 2 of 9)	intron (NM_144792, intron 2 of 9)	34474	NM_001168525	208449	Mm.329810	NM_144792	ENSMUSG00000040451	Sgms1	9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23	sphingomyelin synthase 1	protein-coding
unique_peak2-35902-5-8--0.874305337448166-1.10484139239135	chr19	4129803	4130383	+	0	NA	intron (NM_025889, intron 5 of 6)	intron (NM_025889, intron 5 of 6)	4133	NM_025889	66990	Mm.276255	NM_025889		Tmem134	2410001H17Rik|AI463452	transmembrane protein 134	protein-coding
common_peak1-14403-25-41--0.530467517433655-0.749946955723563	chr2	173659534	173660390	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	96890	NM_019806	56491	Mm.260456	NM_019806	ENSMUSG00000054455	Vapb	AI225786|AI840687|AI848259|D2Abb2e|R75548|VAP33b|Vamp33b	vesicle-associated membrane protein, associated protein B and C	protein-coding
unique_peak2-38867-4-14--1.93035110946177-2.23384849113406	chr7	145251231	145251803	+	0	NA	Intergenic	Intergenic	337896	NM_183289	70571	Mm.334297	NM_183289	ENSMUSG00000091002	Tcerg1l	5730476P14Rik	transcription elongation regulator 1-like	protein-coding
unique_peak2-38086-11-14--0.398197011356905-0.379391706698377	chr6	54365439	54366165	+	0	NA	intron (NR_033635, intron 1 of 13)	RMER12B|LTR|ERVK	14413	NR_033635	100042056	Mm.448157	NM_198118	ENSMUSG00000073067	9130019P16Rik	6430501H15Rik|OTTMUSG00000023151	RIKEN cDNA 9130019P16 gene	ncRNA
common_peak2-28096-20-22--0.03548717146582-0.301029995663994	chr4	86748591	86749355	+	0	NA	intron (NM_172426, intron 2 of 10)	intron (NM_172426, intron 2 of 10)	124894	NM_001110240	76376	Mm.490487	NM_172426	ENSMUSG00000037996	Slc24a2	2810021B17Rik|6330417K15Rik|AI847460|Nckx2	solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	protein-coding
common_peak2-30533-101-175--0.205417381900878-0.621695271213177	chr7	67372000	67373730	+	0	NA	Intergenic	Lx3_Mus|LINE|L1	-87760	NM_001082962	20646	Mm.274995	NM_013670	ENSMUSG00000000948	Snrpn	2410045I01Rik|HCERN3|Peg4|Pwcr1|SMN	small nuclear ribonucleoprotein N	protein-coding
common_peak2-23289-37-34-0.396710054540852-0.69337412621609	chr15	31186604	31187416	+	0	NA	intron (NM_146057, intron 2 of 3)	intron (NM_146057, intron 2 of 3)	32870	NM_146057	223453	Mm.222867	NM_146057	ENSMUSG00000039168	Dap	4921531N22Rik|AI789753|AU040360	death-associated protein	protein-coding
common_peak2-23886-21-43--0.889942353371062-1.48724131519613	chr16	58408309	58409065	+	0	NA	promoter-TSS (NM_028523)	promoter-TSS (NM_028523)	39	NM_028523	73379	Mm.373589	NM_028523	ENSMUSG00000035107	Dcbld2	1700055P21Rik|AW146002|CLCP1|Esdn	discoidin, CUB and LCCL domain containing 2	protein-coding
common_peak1-13902-74-71-0.545961575536295-1.73629885863216	chr2	78868910	78870299	+	0	NA	Intergenic	L1MC1|LINE|L1	160400	NM_009454	22193	Mm.1485	NM_009454		Ube2e3	Ubce4|ubcM2	ubiquitin-conjugating enzyme E2E 3	protein-coding
common_peak2-22209-37-61--0.428203238901056-0.759155512401768	chr12	111758129	111759661	+	0	NA	intron (NM_001081457, intron 1 of 12)	intron (NM_001081457, intron 1 of 12)	34946	NM_012023	26931	Mm.240396	NM_012023	ENSMUSG00000017843	Ppp2r5c	2610043M05Rik|2700063L20Rik|AI060890|AW545884|C85228|D12Bwg0916e|mKIAA0044	protein phosphatase 2, regulatory subunit B', gamma	protein-coding
unique_peak1-4842-16-7-1.11826364226806-1.23399803405144	chr3	152308862	152309741	+	0	NA	intron (NM_001081277, intron 5 of 13)	intron (NM_001081277, intron 5 of 13)	-20576	NR_040386	99542	Mm.394921	NR_040386	ENSMUSG00000097745	AI115009	-	expressed sequence AI115009	ncRNA
common_peak1-14184-60-56-0.52140184745579-1.37112088173475	chr2	144368144	144369716	+	0	NA	3' UTR (NM_015754, exon 5 of 5)	3' UTR (NM_015754, exon 5 of 5)	7665	NM_015754	26450	Mm.440564	NM_015754	ENSMUSG00000027428	Rbbp9	Bog	retinoblastoma binding protein 9	protein-coding
common_peak1-16683-36-43-0.0198894675304571-0.310901174692144	chr6	8777504	8778669	+	0	NA	Intergenic	Intergenic	-49602	NM_010492	15893	Mm.275683	NM_010492	ENSMUSG00000062995	Ica1	69kDa|ICA69	islet cell autoantigen 1	protein-coding
unique_peak2-38775-4-5--0.608423014574403-0.909929411522249	chr7	127573440	127573876	+	0	NA	intron (NM_001278944, intron 3 of 29)	intron (NM_001278944, intron 3 of 29)	8443	NM_001278944	233810		NM_001278943	ENSMUSG00000051900	Abca16	AY243472	ATP-binding cassette, sub-family A (ABC1), member 16	protein-coding
common_peak2-22146-11-8-0.338768582809301-1.14218153353838	chr12	86241338	86241825	+	0	NA	Intergenic	Intergenic	-24136	NM_013589	16997	Mm.3900	NM_013589	ENSMUSG00000002020	Ltbp2	AW208642	latent transforming growth factor beta binding protein 2	protein-coding
unique_peak1-23-11-2-1.92373108353046-2.32232533660526	chr1	6624230	6624891	+	0	NA	intron (NM_001244693, intron 2 of 22)	intron (NM_001244693, intron 2 of 22)	-95572	NR_045189	240690	Mm.234612	NM_173868	ENSMUSG00000033740	St18	AV348974|Myt3|NZF-3|Nzf3|mKIAA0535	suppression of tumorigenicity 18	protein-coding
unique_peak1-438-8-0-3.00522241794757-2.70926996097583	chr1	164987423	164987949	+	0	NA	intron (NM_030071, intron 11 of 21)	B2_Mm2|SINE|B2	28115	NM_030071	78258	Mm.78368	NM_030071	ENSMUSG00000071890	Mroh9	4921528O07Rik|Armc11	maestro heat-like repeat family member 9	protein-coding
common_peak1-17083-14-18--0.348711353085941-0.360333814299795	chr6	108688247	108689035	+	0	NA	Intergenic	Intergenic	-44412	NM_026011	67166	Mm.271178	NM_026011	ENSMUSG00000030105	Arl8b	2610313E07Rik|3100002J04Rik|Arl10c|gie1	ADP-ribosylation factor-like 8B	protein-coding
unique_peak2-36252-6-7--0.434601889619698-0.97990265578305	chr2	51056020	51056339	+	0	NA	Intergenic	Intergenic	-41172	NR_040636	329404	Mm.417725	NR_040636	ENSMUSG00000086349	Gm13497	A730015I17|OTTMUSG00000012425	predicted gene 13497	ncRNA
unique_peak2-34271-10-8-0.186490343566457-1.078512453669	chr13	67332626	67333181	+	0	NA	Intergenic	RLTR4_Mm|LTR|ERV1	37101	NM_001001152	238690	Mm.306358	NM_001001152	ENSMUSG00000055480	Zfp458	BC062958|Rslcan-7|Znf728|mszf59-2	zinc finger protein 458	protein-coding
common_peak1-15863-23-8-1.55184250306677-2.47979361197949	chr5	4222861	4223981	+	0	NA	Intergenic	PB1D10|SINE|Alu	31054	NM_001042670	208595	Mm.129815	NM_001042670	ENSMUSG00000053178	Mterf1b	ENSMUSG00000053178|Gm9897	mitochondrial transcription termination factor 1b	protein-coding
common_peak2-21978-119-160-0.207521043015428-0.72568316258107	chr12	49400624	49402194	+	0	NA	Intergenic	Lx3C|LINE|L1	-1082461	NM_001160112	15228	Mm.4704	NM_008241	ENSMUSG00000020950	Foxg1	2900064B05Rik|BF-1|Bf1|Hfh9|Hfhbf1	forkhead box G1	protein-coding
unique_peak2-36309-1-6--2.43441193227435-1.56314192529759	chr2	75831666	75832005	+	0	NA	intron (NM_001081033, intron 19 of 19)	intron (NM_001081033, intron 19 of 19)	-11811	NM_030188	78802	Mm.282339	NM_030188	ENSMUSG00000075271	Ttc30a1	4930506L13Rik	tetratricopeptide repeat domain 30A1	protein-coding
common_peak1-18291-39-93--0.938827604758484-3.31086661446844	chr8	44934578	44936001	+	0	NA	Intergenic	PB1D10|SINE|Alu	-150444	NM_001079931	384814	Mm.491652	NM_001079931		Gm5347	EG384814	predicted gene 5347	protein-coding
unique_peak2-38741-7-8--0.370834171144123-1.00793137938329	chr7	113460735	113461224	+	0	NA	Intergenic	Intergenic	7063	NR_030720	668128	Mm.484022	NR_030720		Gm8989	EG668128|Gm21911	very large inducible GTPase 1 pseudogene	pseudo
unique_peak2-36220-9-14--0.717277189204299-0.53895475198017	chr2	35337186	35337856	+	0	NA	Intergenic	LTR73|LTR|ERV1	-20576	NM_001145821	14594	Mm.281124	NM_010283	ENSMUSG00000035778	Ggta1	AW108479|GALT|Gal|Ggta|Ggta-1|alpha3GalT	glycoprotein galactosyltransferase alpha 1, 3	protein-coding
unique_peak1-5678-17-3-2.21829633820504-3.11807310444576	chr6	31515446	31516133	+	0	NA	Intergenic	Intergenic	-1852	NM_013723	27205	Mm.89918	NM_013723	ENSMUSG00000025608	Podxl	AW121214|Ly102|PC|PCLP-1|Pclp1	podocalyxin-like	protein-coding
common_peak1-15129-21-48--1.04522057884897-2.07189913552604	chr3	139074332	139075235	+	0	NA	intron (NM_198659, intron 10 of 13)	intron (NM_198659, intron 10 of 13)	205926	NM_198659	381476	Mm.188334	NM_198659	ENSMUSG00000047940	Stpg2	B930007M17Rik|Gm1017	sperm tail PG rich repeat containing 2	protein-coding
common_peak1-16240-22-18-0.399356591643819-0.549581527953406	chr5	103772660	103773745	+	0	NA	Intergenic	Intergenic	-45154	NR_040699	74624	Mm.389662	NR_040699		4930429D17Rik	-	RIKEN cDNA 4930429D17 gene	ncRNA
common_peak2-27978-31-29-0.318348075204605-0.512115693271959	chr4	43398985	43400034	+	0	NA	intron (NM_001037709, intron 1 of 11)	PB1D10|SINE|Alu	4655	NM_001037709	100213	Mm.235730	NM_199057	ENSMUSG00000035969	Rusc2	AI840675|mKIAA0375	RUN and SH3 domain containing 2	protein-coding
unique_peak1-1219-15-1-3.01216475055566-4.18809100057339	chr11	106981867	106982640	+	0	NA	intron (NM_176850, intron 1 of 27)	B1_Mus1|SINE|Alu	10983	NM_176850	207165	Mm.343986	NM_176850	ENSMUSG00000040481	Bptf	9430093H17Rik|Falz	bromodomain PHD finger transcription factor	protein-coding
unique_peak1-6693-8-0-3.00522241794757-2.70926996097583	chr8	31722783	31723214	+	0	NA	Intergenic	Intergenic	44131	NR_045856	71314	Mm.158666	NR_045856	ENSMUSG00000097044	4933433F19Rik	-	RIKEN cDNA 4933433F19 gene	ncRNA
common_peak2-19599-74-94-0.14603096864766-0.433131567979839	chr1	30872709	30874158	+	0	NA	intron (NM_001081080, intron 7 of 14)	intron (NM_001081080, intron 7 of 14)	46668	NM_001081080	213109	Mm.194486	NM_025871	ENSMUSG00000048874	Phf3	2310061N19Rik|mKIAA0244	PHD finger protein 3	protein-coding
common_peak2-26059-13-10-0.319040412000471-0.446472590016315	chr2	35487732	35488279	+	0	NA	intron (NM_001290641, intron 1 of 15)	LTR40a|LTR|ERVL	10504	NM_001114124	69601	Mm.29629	NM_001001602	ENSMUSG00000026883	Dab2ip	2310011D08Rik|AI480459|Aip1|mKIAA1743	disabled 2 interacting protein	protein-coding
common_peak1-14680-10-7-0.356415345008769-1.12966497611638	chr3	63905202	63905749	+	0	NA	intron (NM_019918, intron 4 of 5)	intron (NM_019918, intron 4 of 5)	19911	NM_019918	56544	Mm.57069	NM_019918	ENSMUSG00000027824	Vmn2r1	Casrl1|EG56544|V2r83	vomeronasal 2, receptor 1	protein-coding
unique_peak2-36328-5-6--0.511735258063458-0.947717972411649	chr2	90502126	90502510	+	0	NA	Intergenic	Lx9|LINE|L1	-15054	NM_021512	59015	Mm.24532	NM_021512	ENSMUSG00000051329	Nup160	160kDa|2810011M03Rik|AA414952|AU020188|Gtl-13|Gtl1-13|Gtl13|mKIAA0197	nucleoporin 160	protein-coding
common_peak1-15244-8-11--0.579740082773585-1.14218153353838	chr4	11147171	11147594	+	0	NA	intron (NM_001159595, intron 17 of 26)	intron (NM_001159595, intron 17 of 26)	28526	NM_001282943	12448	Mm.35867	NM_009830	ENSMUSG00000028212	Ccne2	-	cyclin E2	protein-coding
common_peak2-19968-39-44-0.123908150589479-0.359431063687663	chr1	133187710	133188934	+	0	NA	intron (NM_001081011, intron 22 of 22)	intron (NM_001081011, intron 22 of 22)	-12182	NM_019777	56489	Mm.386783	NM_019777	ENSMUSG00000042349	Ikbke	AW558201|IKK-i|IKKepsilon|Ikki	inhibitor of kappaB kinase epsilon	protein-coding
common_peak1-8863-11-13--0.298661337805991-0.337263207250336	chr11	33162343	33162847	+	0	NA	intron (NR_110973, intron 25 of 28)	intron (NR_110973, intron 25 of 28)	-59007	NM_019916	27140	Mm.25362	NM_019916	ENSMUSG00000040610	Tlx3	Hox11l2|Rnx|Tlx1l2	T cell leukemia, homeobox 3	protein-coding
common_peak2-27694-14-15--0.100783839642355-0.301029995663982	chr3	121617706	121618339	+	0	NA	Intergenic	Intergenic	-38222	NM_172525	214137	Mm.229287	NM_172525	ENSMUSG00000039831	Arhgap29	6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1	Rho GTPase activating protein 29	protein-coding
unique_peak2-39468-6-10--0.894033508256995-1.21398586181642	chr9	56104668	56105298	+	0	NA	intron (NM_172924, intron 4 of 6)	intron (NM_172924, intron 4 of 6)	-96106	NM_019793	56434	Mm.28484	NM_019793	ENSMUSG00000032324	Tspan3	1700055K04Rik|TM4-A|Tm4sf8	tetraspanin 3	protein-coding
unique_peak1-799-137-73-1.57358133392681-17.066164531135	chr11	3136376	3139674	+	0	NA	intron (NM_001166547, intron 14 of 18)	intron (NM_001166547, intron 14 of 18)	28364	NM_007879	13494	Mm.3250	NM_007879	ENSMUSG00000020457	Drg1	AA408859|AI132520|Nedd3	developmentally regulated GTP binding protein 1	protein-coding
common_peak2-22591-18-24--0.330937038546373-0.380101753845076	chr13	72628749	72629815	+	0	NA	Intergenic	Intergenic	136730	NR_030701	328287	Mm.235072	NR_030701		Gm20554	D430050G20	predicted gene, 20554	ncRNA
common_peak1-11186-34-31-0.382068527001266-0.662333595915619	chr15	76924730	76925906	+	0	NA	intron (NM_001110827, intron 10 of 13)	intron (NM_001110827, intron 10 of 13)	10490	NR_108037	74303	Mm.444304	NR_108037	ENSMUSG00000097267	1700109K24Rik	4933425G21Rik	RIKEN cDNA 1700109K24 gene	ncRNA
unique_peak1-1764-7-4-0.477162735410827-1.09384600808989	chr13	109820230	109820617	+	0	NA	intron (NM_011056, intron 2 of 16)	Lx7|LINE|L1	-294515	NR_030644	100124489		NR_030644		Mir582	Mirn582|mmu-mir-582	microRNA 582	ncRNA
common_peak1-17859-6-20--1.82691931239846-2.0280102512677	chr7	113368827	113369348	+	0	NA	Intergenic	Lx3A|LINE|L1	-10233	NM_029000	74558	Mm.458429	NM_029000	ENSMUSG00000045868	Gvin1	9130002C22Rik|9830104F22Rik|Iigs1|VLIG|VLIG-1	GTPase, very large interferon inducible 1	protein-coding
common_peak1-7480-54-46-0.618496909952096-1.55529262229468	chr1	193411684	193413674	+	0	NA	intron (NM_178632, intron 4 of 19)	intron (NM_178632, intron 4 of 19)	13066	NM_178632	77065	Mm.338175	NM_178632	ENSMUSG00000037461	Ints7	5930412E23Rik	integrator complex subunit 7	protein-coding
unique_peak1-1160-9-2-1.60465090568306-1.87199725847353	chr11	99089553	99090042	+	0	NA	intron (NM_020618, intron 2 of 10)	intron (NM_020618, intron 2 of 10)	2534	NM_020618	57376	Mm.379086	NM_020618	ENSMUSG00000037935	Smarce1	2810417B20Rik|5830412H02Rik|9030408N19Rik|Baf27	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	protein-coding
common_peak2-27008-7-6--0.00826409175941478-0.97990265578305	chr2	173255010	173255352	+	0	NA	Intergenic	MIR|SINE|MIR	-92912	NM_028158	72221	Mm.46132	NM_028158	ENSMUSG00000027518	1700021F07Rik	-	RIKEN cDNA 1700021F07 gene	protein-coding
common_peak2-31598-12-13--0.158578936969966-0.301029995663979	chr8	121828929	121829587	+	0	NA	intron (NM_019707, intron 11 of 13)	ID_B1|SINE|B4	-39180	NM_024219	68196	Mm.358714	NM_024219	ENSMUSG00000031839	Hsbp1	0610007A03Rik|AA408769|Hsp25	heat shock factor binding protein 1	protein-coding
unique_peak1-6702-7-3-0.799090830298189-1.23214870625617	chr8	34124073	34124600	+	0	NA	Intergenic	L1Md_T|LINE|L1	-63838	NM_001177589	100042715	Mm.291093	NM_001177589		Gm3985	-	predicted gene 3985	protein-coding
common_peak2-21984-6-9--0.75652998450706-1.11707584880836	chr12	52503150	52503555	+	0	NA	intron (NM_029825, intron 10 of 24)	intron (NM_029825, intron 10 of 24)	24785	NM_029825	76983	Mm.216511	NM_029825	ENSMUSG00000020952	Scfd1	3110021P21Rik|RA410|STXBP1L2	Sec1 family domain containing 1	protein-coding
unique_peak2-37239-3-9--1.73591118484664-1.57096726280955	chr4	89527456	89527955	+	0	NA	Intergenic	Intergenic	172816	NM_175647	242523	Mm.130167	NM_175647	ENSMUSG00000043753	Dmrta1	Dmrt4	doublesex and mab-3 related transcription factor like family A1	protein-coding
unique_peak2-36143-4-5--0.608423014574403-0.909929411522249	chr2	18065386	18065816	+	0	NA	intron (NR_045538, intron 8 of 22)	intron (NR_045538, intron 8 of 22)	79389	NM_001252561	17354	Mm.209175	NM_010804	ENSMUSG00000026743	Mllt10	Af10|B130021D15Rik|D630001B22Rik|mKIAA4140	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	protein-coding
unique_peak2-34357-4-9--1.34538860874061-1.36011389749466	chr13	101736264	101736898	+	0	NA	Intergenic	B3A|SINE|B2	-133199	NM_022885	69048	Mm.402215	NM_022885	ENSMUSG00000021629	Slc30a5	1810010K08Rik|AF233321|ZNT5|ZTL1|ZnT-5|Zntl1	solute carrier family 30 (zinc transporter), member 5	protein-coding
common_peak1-9278-18-17-0.142994149786039-0.353907621462753	chr11	87986695	87987505	+	0	NA	intron (NM_001172099, intron 1 of 9)	intron (NM_001172099, intron 1 of 9)	4033	NM_001172099	103841	Mm.374846	NM_198013	ENSMUSG00000018378	Cuedc1	AI841487|C330016O16Rik	CUE domain containing 1	protein-coding
common_peak2-22174-71-98-0.0150875586403618-0.305416883213638	chr12	101082608	101084196	+	0	NA	intron (NM_030172, intron 5 of 5)	intron (NM_030172, intron 5 of 5)	38250	NM_030172	78767	Mm.235920	NM_030172	ENSMUSG00000021176	Efcab11	2610021K21Rik|2610110A13Rik	EF-hand calcium binding domain 11	protein-coding
common_peak1-16684-69-33-1.50767960600839-7.4501118718888	chr6	11906592	11908272	+	0	NA	intron (NM_001168382, intron 5 of 17)	L1_Mm|LINE|L1	31551	NM_001168382	75725	Mm.212411	NM_029404	ENSMUSG00000029629	Phf14	1110001C23Rik|4932409F11Rik|5730446A07Rik|AA623952|AV297001|mKIAA0783	PHD finger protein 14	protein-coding
common_peak2-26949-69-86-0.152198951410004-0.444694812276494	chr2	164745798	164746664	+	0	NA	Intergenic	Intergenic	-8981	NM_199027	329559	Mm.330776	NM_199027	ENSMUSG00000039834	Zfp335	1810045J01Rik|NIF-1|Nif1|Znf335	zinc finger protein 335	protein-coding
common_peak1-8055-14-16--0.188246680892695-0.308035960714963	chr1	172376590	172377225	+	0	NA	intron (NM_027528, intron 2 of 7)	B3A|SINE|B2	110334	NM_027528	70729	Mm.487078	NM_027528	ENSMUSG00000038473	Nos1ap	6330408P19Rik|Capon	nitric oxide synthase 1 (neuronal) adaptor protein	protein-coding
common_peak2-20233-12-12--0.0516637330534535-0.309718203022949	chr1	181352494	181353079	+	0	NA	intron (NM_027188, intron 2 of 11)	intron (NM_027188, intron 2 of 11)	95348	NM_027188	69726	Mm.222338	NM_027188		Smyd3	2410008A19Rik|Zmynd1	SET and MYND domain containing 3	protein-coding
common_peak2-19935-16-18--0.129663871175524-0.307235046933848	chr1	127868675	127869161	+	0	NA	intron (NM_176957, intron 12 of 12)	L1MA4A|LINE|L1	-60127	NM_145100	72585	Mm.490405	NM_145100		Lypd1	2700050C12Rik|AI853408|C530008O16Rik|Lynx2|Lypdc1	Ly6/Plaur domain containing 1	protein-coding
unique_peak1-6257-17-7-1.21829633820504-1.55050753388977	chr7	19822286	19822935	+	0	NA	intron (NM_207525, intron 1 of 1)	intron (NM_207525, intron 1 of 1)	8872	NM_207525	403187	Mm.239583	NM_207525		Opa3	D630048P19Rik|Gm1425|Gm472	optic atrophy 3	protein-coding
common_peak2-23337-4-6--0.830815435910851-0.989110657569874	chr15	38456085	38456401	+	0	NA	Intergenic	MT2B2|LTR|ERVL	-7222	NM_018745	54375	Mm.250214	NM_018745	ENSMUSG00000037458	Azin1	1700085L02Rik|AI414949|Oazi|Oazin	antizyme inhibitor 1	protein-coding
common_peak1-7896-33-32-0.286943443167075-0.49444889977478	chr1	135312791	135314047	+	0	NA	intron (NM_011439, intron 1 of 13)	intron (NM_011439, intron 1 of 13)	7370	NM_011439	20668	Mm.8575	NM_011439	ENSMUSG00000070643	Sox13	AA407916|AW259412|AW540933|Sox-13	SRY (sex determining region Y)-box 13	protein-coding
common_peak1-15153-21-22-0.0459273092092225-0.319918318021793	chr3	145937957	145938701	+	0	NA	intron (NM_022983, intron 2 of 2)	intron (NM_022983, intron 2 of 2)	54404	NM_022983	65086	Mm.155520	NM_022983	ENSMUSG00000036832	Lpar3	Edg7|lpA3	lysophosphatidic acid receptor 3	protein-coding
unique_peak2-37320-8-10--0.454209200689727-1.078512453669	chr4	126262355	126262875	+	0	NA	intron (NM_175554, intron 18 of 25)	intron (NM_175554, intron 18 of 25)	-24483	NM_001013755	230757	Mm.296838	NM_001013755	ENSMUSG00000073755	5730409E04Rik	7530403E16Rik|AI849033	RIKEN cDNA 5730409E04Rik gene	protein-coding
common_peak1-14478-195-327-0.0395229871316651-0.333734129738733	chr3	135690339	135692387	+	0	NA	Intergenic	Intergenic	-188130	NR_040540	71038	Mm.410798	NR_040540		4933401H06Rik	-	RIKEN cDNA 4933401H06 gene	ncRNA
common_peak1-11594-110-138-0.283056687655137-0.981924396091499	chr16	17200616	17201882	+	0	NA	intron (NM_009456, intron 1 of 3)	CpG	336	NM_009456	22195	Mm.3074	NM_009456	ENSMUSG00000038965	Ube2l3	C79827|UbcM4|Ubce7	ubiquitin-conjugating enzyme E2L 3	protein-coding
common_peak2-21740-13-19--0.543456064249594-0.466170754204149	chr11	115536444	115536996	+	0	NA	intron (NM_008163, intron 2 of 5)	B3|SINE|B2	33191	NM_008163	14784	Mm.439649	NM_008163	ENSMUSG00000059923	Grb2	AA408164|Ash	growth factor receptor bound protein 2	protein-coding
common_peak1-14645-16-12-0.417823924126969-0.489164546851866	chr3	57318853	57319511	+	0	NA	intron (NM_133784, intron 2 of 6)	B3|SINE|B2	60616	NM_133784	97064	Mm.405029	NM_133784	ENSMUSG00000027803	Wwtr1	2310058J06Rik|2610021I22Rik|C78399|Taz	WW domain containing transcription regulator 1	protein-coding
common_peak2-25752-26-11-1.34293659143731-2.2880788707084	chr19	29239201	29239792	+	0	NA	Intergenic	Intergenic	29727	NR_029778	724062		NR_029778		Mir101b	Mirn101b|mir-101b	microRNA 101b	ncRNA
common_peak2-30507-11-8-0.338768582809301-1.14218153353838	chr7	65466745	65467163	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-446618	NM_009728	11982	Mm.135129	NM_009728	ENSMUSG00000025324	Atp10a	Atp10c|pfatp	ATPase, class V, type 10A	protein-coding
unique_peak2-33846-4-10--1.48289213249054-1.5150158574804	chr12	16811132	16811552	+	0	NA	Intergenic	Intergenic	-3650	NM_015764	268527	Mm.428062	NM_015764	ENSMUSG00000036523	Greb1	5730583K22Rik|9130004E13|AF180470|AU023194|mKIAA0575	gene regulated by estrogen in breast cancer protein	protein-coding
common_peak2-19987-12-11-0.0638134843664826-0.337263207250336	chr1	134070595	134071091	+	0	NA	Intergenic	BC1_Mm|scRNA|scRNA	-17170	NM_001033250	213409	Mm.426321	NM_001033250	ENSMUSG00000079330	Lemd1	4930540I23Rik|6430514M23Rik|AI428128|LEMP-1	LEM domain containing 1	protein-coding
common_peak2-27918-13-24--0.865384159136956-0.879255460030357	chr4	11007761	11008349	+	0	NA	Intergenic	Intergenic	-4703	NM_001085493	76947	Mm.275265	NM_001085493	ENSMUSG00000050323	Ndufaf6	2310030N02Rik	NADH dehydrogenase (ubiquinone) complex I, assembly factor 6	protein-coding
common_peak2-25984-44-73--0.387560531060415-0.729729194218058	chr19	53944756	53945760	+	0	NA	Intergenic	Intergenic	-21463	NM_011050	18569	Mm.1605	NM_011050	ENSMUSG00000024975	Pdcd4	D19Ucla1|Ma3|Tis	programmed cell death 4	protein-coding
unique_peak1-2434-8-6-0.197867495889966-1.03789460276074	chr15	101410929	101411485	+	0	NA	intron (NM_016879, intron 1 of 3)	intron (NM_016879, intron 1 of 3)	-6872	NM_133357	109052	Mm.106868	NM_133357	ENSMUSG00000022986	Krt75	4732468K03Rik|AA589387|K6hf|Krt2-6hf|Krtcap1	keratin 75	protein-coding
common_peak1-11349-11-13--0.298661337805991-0.337263207250336	chr15	88862815	88863482	+	0	NA	intron (NM_031260, intron 22 of 26)	B1_Mus1|SINE|Alu	-27008	NM_001002005	406218	Mm.483059	NM_001002005	ENSMUSG00000058441	Panx2	-	pannexin 2	protein-coding
common_peak1-7541-21-26--0.185398236897233-0.318406410381916	chr1	36302898	36303609	+	0	NA	Intergenic	MT2C_Mm|LTR|ERVL	-2106	NM_198899	320011	Mm.261022	NM_198899	ENSMUSG00000037470	Uggt1	0910001L17Rik|A930007H10Rik|AA589501|AI414429|AI448372|C820010P03Rik|GT|UGT1|Ugcgl1	UDP-glucose glycoprotein glucosyltransferase 1	protein-coding
common_peak1-9494-36-38-0.193918867305506-0.429377759889511	chr11	109349463	109350639	+	0	NA	intron (NM_028710, intron 3 of 13)	ID_B1|SINE|B4	-15141	NM_001029842	104681	Mm.265874	NM_134038	ENSMUSG00000041920	Slc16a6	AW743111|ESTM12|MCT 6|MCT 7|MCT6	solute carrier family 16 (monocarboxylic acid transporters), member 6	protein-coding
common_peak1-16113-96-147--0.0434021512736216-0.307746008681235	chr5	65762914	65764658	+	0	NA	intron (NM_031180, intron 2 of 4)	B3A|SINE|B2	18884	NM_011292	20005	Mm.300271	NM_011292	ENSMUSG00000047215	Rpl9	-	ribosomal protein L9	protein-coding
common_peak1-11634-25-15-0.861849905345106-1.28534286439186	chr16	21255545	21256715	+	0	NA	promoter-TSS (NR_106145)	promoter-TSS (NR_106145)	9	NR_106145	102465781		NR_106145	miRBase:MI0025025	Mir7680	mmu-mir-7680	microRNA mir-7680	ncRNA
common_peak1-9856-9-9--0.132314688483142-1.03275496310833	chr12	80219484	80219975	+	0	NA	Intergenic	RMER1B|Other|Other	-12046	NM_009705	11847	Mm.3506	NM_009705	ENSMUSG00000021125	Arg2	AII|AU022422	arginase type II	protein-coding
common_peak1-9889-63-95--0.146649909650566-0.377414073485289	chr12	85373679	85375151	+	0	NA	Intergenic	ORR1E|LTR|MaLR	-4914	NM_134247	171282	Mm.482217	NM_134247	ENSMUSG00000052392	Acot4	B430212I04Rik|PTE-Ib|Pte1b|Pte2b	acyl-CoA thioesterase 4	protein-coding
common_peak1-10746-9-7-0.18961340640422-1.05908390183068	chr14	68775681	68776185	+	0	NA	Intergenic	Intergenic	-32872	NM_008691	18040	Mm.242832	NM_008691	ENSMUSG00000022054	Nefm	NF-M|NF160|NF165|Nef3|Nfm	neurofilament, medium polypeptide	protein-coding
common_peak2-21246-29-27-0.304935158557507-0.525808162491371	chr11	69015606	69016828	+	0	NA	Intergenic	MLT1H|LTR|MaLR	-4872	NM_009661	11688	Mm.289672	NM_009661	ENSMUSG00000020891	Alox8	15-LOX-2|15-LOX-B|8-LOX|8S-LOX|Alox15b	arachidonate 8-lipoxygenase	protein-coding
unique_peak1-4480-21-6-1.76213434320863-2.81226952737395	chr3	60129104	60129902	+	0	NA	Intergenic	Intergenic	-147249	NM_001253713	56758	Mm.255723	NM_020007	ENSMUSG00000027763	Mbnl1	Mbnl|mKIAA0428	muscleblind-like 1 (Drosophila)	protein-coding
common_peak1-17352-239-380-0.177864653894192-0.997913867568272	chr7	16399309	16401976	+	0	NA	Intergenic	IAPEY3-int|LTR|ERVK	24386	NM_145710	252830	Mm.25863	NM_145710	ENSMUSG00000041583	Obox6	D17Ertd599e	oocyte specific homeobox 6	protein-coding
unique_peak1-1656-20-11-0.903112283870037-1.11267835143409	chr13	62015658	62016642	+	0	NA	Intergenic	MMSAT4|Satellite|Satellite	143210	NR_028430	432812	Mm.317358	NR_028430		BC052688	-	cDNA sequence BC052688	pseudo
common_peak2-28226-24-12-1.09277018462662-1.73042999925837	chr4	119126227	119126859	+	0	NA	TTS (NM_001014900)	TTS (NM_001014900)	31254	NM_001014900	332934	Mm.388911	NM_001014900	ENSMUSG00000070806	Zmynd12	AI414736	zinc finger, MYND domain containing 12	protein-coding
unique_peak1-3962-11-3-1.50869358425161-1.95434855131066	chr2	30897857	30898409	+	0	NA	intron (NM_001038700, intron 9 of 14)	MER3|DNA|MER1_type	53887	NM_001177650	14269	Mm.52297	NM_019406	ENSMUSG00000075415	Fnbp1	1110057E06Rik|2210010H06Rik|FBP1|Fbp17	formin binding protein 1	protein-coding
common_peak1-8890-51-56-0.242033811437832-0.514932048590334	chr11	48973903	48975762	+	0	NA	TTS (NM_146276)	TTS (NM_146276)	1314	NM_146276	258273	Mm.377407	NM_146276	ENSMUSG00000048378	Olfr1394	MOR280-1	olfactory receptor 1394	protein-coding
common_peak2-28103-11-15--0.491306415748387-0.435191258261915	chr4	88802561	88803138	+	0	NA	intron (NM_024433, intron 4 of 7)	L1MA9|LINE|L1	19575	NM_024433	66902	Mm.28500	NM_024433	ENSMUSG00000062937	Mtap	1300019I21Rik|MSAP	methylthioadenosine phosphorylase	protein-coding
common_peak2-30787-7-6--0.00826409175941478-0.97990265578305	chr7	126897824	126898330	+	0	NA	Intergenic	Lx6|LINE|L1	-6360	NM_212441	20216	Mm.334199	NM_016870	ENSMUSG00000030935	Acsm3	Sa|Sah	acyl-CoA synthetase medium-chain family member 3	protein-coding
common_peak1-14049-11-8-0.338768582809301-1.14218153353838	chr2	119207987	119208406	+	0	NA	intron (NM_026574, intron 31 of 35)	intron (NM_026574, intron 31 of 35)	31218	NM_026929	69065	Mm.35083	NM_026929	ENSMUSG00000027313	Chac1	1810008K03Rik	ChaC, cation transport regulator 1	protein-coding
unique_peak2-37210-6-11--1.01956439034085-1.32595962126035	chr4	76449337	76449940	+	0	NA	intron (NM_011211, intron 8 of 39)	intron (NM_011211, intron 8 of 39)	1408161	NM_011211	19266	Mm.184021	NM_011211	ENSMUSG00000028399	Ptprd	1110002J03Rik|3000002J10Rik|B230219D21Rik|R-PTP-delta	protein tyrosine phosphatase, receptor type, D	protein-coding
unique_peak1-1413-8-2-1.42025991722641-1.65811743852845	chr12	79559664	79560176	+	0	NA	intron (NM_145965, intron 5 of 22)	L1MEf|LINE|L1	232278	NM_145965	268566	Mm.341742	NM_145965	ENSMUSG00000047454	Gphn	5730552E08Rik|AI662856|BC027112|C230040D23|GPH|GPHRYN|geph	gephyrin	protein-coding
common_peak1-16630-86-87-0.516204175395056-1.8604272022736	chr6	38353533	38355053	+	0	NA	intron (NM_153600, intron 10 of 17)	intron (NM_153600, intron 10 of 17)	22769	NM_153600	264134	Mm.253446	NM_153600	ENSMUSG00000056832	Ttc26	9330141E21Rik|9430097H08Rik	tetratricopeptide repeat domain 26	protein-coding
unique_peak2-37284-5-18--1.95230784944944-1.99473478107052	chr4	117700124	117700834	+	0	NA	intron (NM_001285521, intron 3 of 10)	intron (NM_001285521, intron 3 of 10)	-98111	NM_001284192	11876	Mm.56897	NM_009711	ENSMUSG00000028539	Artn	neublastin	artemin	protein-coding
unique_peak1-5154-7-2-1.21412832957703-1.45399745587252	chr5	21703677	21704193	+	0	NA	intron (NM_011261, intron 3 of 63)	intron (NM_011261, intron 3 of 63)	146588	NM_011261	19699	Mm.425236	NM_011261	ENSMUSG00000042453	Reln	reeler|rl	reelin	protein-coding
unique_peak1-1613-18-6-1.50556422917075-2.02801025126771	chr13	41335480	41336310	+	0	NA	Intergenic	Intergenic	-9318	NM_001135577	108934	Mm.38578	NM_001135577	ENSMUSG00000091264	Smim13	2900036K02Rik	small integral membrane protein 13	protein-coding
unique_peak1-6851-11-3-1.50869358425161-1.95434855131066	chr8	84773746	84774440	+	0	NA	Intergenic	Intergenic	152392	NM_001254747	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak2-30997-8-10--0.454209200689727-1.078512453669	chr8	8604959	8605515	+	0	NA	Intergenic	Intergenic	55536	NM_010111	13642	Mm.209813	NM_010111	ENSMUSG00000001300	Efnb2	ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1	ephrin B2	protein-coding
common_peak1-15753-23-30--0.232428805877794-0.363124929330844	chr4	150280923	150282100	+	0	NA	intron (NM_020569, intron 2 of 6)	intron (NM_020569, intron 2 of 6)	2519	NM_020569	57320	Mm.277349	NM_020569	ENSMUSG00000028964	Park7	DJ-1|Dj1	Parkinson disease (autosomal recessive, early onset) 7	protein-coding
common_peak2-28725-17-7-1.21829633820504-1.55050753388977	chr5	36136522	36136975	+	0	NA	intron (NM_001177700, intron 1 of 16)	intron (NM_001177700, intron 1 of 16)	36219	NM_177678	231148	Mm.254446	NM_177678	ENSMUSG00000029095	Ablim2	AI606905|C230091L11	actin-binding LIM protein 2	protein-coding
common_peak2-25577-9-5-0.604650905683064-1.21398586181642	chr19	6996019	6996415	+	0	NA	promoter-TSS (NM_007953)	promoter-TSS (NM_007953)	81	NM_007953	26379	Mm.386776	NM_007953	ENSMUSG00000024955	Esrra	ERRalpha|Err1|Estrra|Nr3b1	estrogen related receptor, alpha	protein-coding
common_peak1-8444-13-22--0.745089925419244-0.690311289528838	chr10	79554472	79555211	+	0	NA	intron (NM_183426, intron 1 of 31)	intron (NM_183426, intron 1 of 31)	10606	NM_183426	216161	Mm.262102	NM_183426	ENSMUSG00000035673	Sbno2	BC019206|F730040C21|Sno|Stno	strawberry notch homolog 2 (Drosophila)	protein-coding
unique_peak2-33658-2-8--2.08737925770563-1.65811743852845	chr11	100143893	100144321	+	0	NA	Intergenic	Intergenic	-12922	NM_212483	68239	Mm.158190	NM_212483	ENSMUSG00000053654	Krt42	2410039E07Rik|K17n|Ka22|ecat6	keratin 42	protein-coding
common_peak1-9156-78-121--0.123916243402352-0.376537733660042	chr11	77686474	77687921	+	0	NA	Intergenic	L1MC5|LINE|L1	20177	NM_008952	19193	Mm.8543	NM_008952	ENSMUSG00000017453	Pipox	LPIPOX|Pso	pipecolic acid oxidase	protein-coding
common_peak1-16372-58-94--0.273905673440451-0.583801854567669	chr5	122706888	122708391	+	0	NA	intron (NM_001039153, intron 3 of 13)	intron (NM_001039153, intron 3 of 13)	6830	NR_104441	654470	Mm.28804	NM_001039153	ENSMUSG00000038593	Tctn1	G730031O11Rik|Tect1	tectonic family member 1	protein-coding
common_peak1-13585-23-34--0.407515512435886-0.533344939162177	chr2	13977607	13978423	+	0	NA	promoter-TSS (NM_013935)	promoter-TSS (NM_013935)	-353	NM_013935	30963	Mm.241205	NM_013935	ENSMUSG00000063275	Ptpla	HACD1	protein tyrosine phosphatase-like (proline instead of catalytic arginine), member a	protein-coding
common_peak2-24577-44-66--0.244196355889237-0.44415727438309	chr17	30575541	30577020	+	0	NA	intron (NM_172618, intron 6 of 11)	MTEb-int|LTR|MaLR	-43155	NR_030688	623169	Mm.440508	NR_030688		Gm6402	EG623169	ribosomal protein S17 pseudogene	pseudo
unique_peak2-32720-2-6--1.72480917832092-1.26211192963361	chr1	156992105	156992505	+	0	NA	intron (NM_008209, intron 1 of 5)	LTR33|LTR|ERVL	1605	NM_008209	15064	Mm.7580	NM_008209	ENSMUSG00000026471	Mr1	H2ls	major histocompatibility complex, class I-related	protein-coding
common_peak1-15012-18-56--1.51997086293639-4.15660607841328	chr3	115887463	115888358	+	0	NA	Intergenic	Intergenic	-55304	NM_011693	22329	Mm.76649	NM_011693	ENSMUSG00000027962	Vcam1	CD106|Vcam-1	vascular cell adhesion molecule 1	protein-coding
unique_peak2-33029-4-10--1.48289213249054-1.5150158574804	chr10	69571135	69571683	+	0	NA	intron (NM_001111121, intron 1 of 8)	intron (NM_001111121, intron 1 of 8)	11540	NM_001111121	76551	Mm.281741	NM_001111121	ENSMUSG00000048701	Ccdc6	2810012H18Rik|AA536681|AA960498|AW061011	coiled-coil domain containing 6	protein-coding
common_peak1-16252-52-71--0.061665011176613-0.307234413593021	chr5	105415169	105416391	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-4044	NM_030239	27405	Mm.389663	NM_030239	ENSMUSG00000029299	Abcg3	Abcp2|Mxr2	ATP-binding cassette, sub-family G (WHITE), member 3	protein-coding
unique_peak2-38754-5-6--0.511735258063458-0.947717972411649	chr7	118935749	118936136	+	0	NA	Intergenic	Intergenic	-12451	NM_173739	233733	Mm.323322	NM_173739	ENSMUSG00000038296	Galnt18	2900011G21Rik|BC024988|Galntl4	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 18	protein-coding
unique_peak1-5658-25-12-1.16141018720401-1.87883858401928	chr6	30320799	30321859	+	0	NA	intron (NM_172735, intron 8 of 10)	MT2C_Mm|LTR|ERVL	19681	NM_172735	232679	Mm.29780	NM_172735	ENSMUSG00000039130	Zc3hc1	1110054L24Rik|AU018540|AU019789|HSPC216|Nipa	zinc finger, C3HC type 1	protein-coding
common_peak1-17781-19-33--0.684775514588653-0.884951936461256	chr7	97788523	97789431	+	0	NA	Intergenic	Intergenic	-164472	NM_026734	68472	Mm.289791	NM_026734		Tmem126b	1110001A23Rik	transmembrane protein 126B	protein-coding
unique_peak1-7286-9-0-3.18961340640422-3.01029995663981	chr9	106779705	106780183	+	0	NA	intron (NM_001015507, intron 22 of 22)	intron (NM_001015507, intron 22 of 22)	9387	NM_175402	109095	Mm.431589	NM_175402	ENSMUSG00000045365	Rbm15b	1810017N16Rik	RNA binding motif protein 15B	protein-coding
common_peak2-21195-40-41-0.266658259972337-0.537526587463064	chr11	60536610	60537734	+	0	NA	intron (NM_022009, intron 3 of 29)	intron (NM_022009, intron 3 of 29)	3551	NM_022009	14248	Mm.339755	NM_022009	ENSMUSG00000002812	Flii	3632430F08Rik|Fli1|Fliih	flightless I homolog (Drosophila)	protein-coding
unique_peak1-6263-12-9-0.326847890200276-0.459837087125828	chr7	24298918	24299488	+	0	NA	Intergenic	Lx3_Mus|LINE|L1	-8595	NM_001101562	622032	Mm.474428	NM_001101562	ENSMUSG00000090715	Vmn1r167	EG622032|Gm6279	vomeronasal 1 receptor 167	protein-coding
common_peak2-26472-12-9-0.326847890200276-0.459837087125828	chr2	77269440	77269875	+	0	NA	intron (NM_178723, intron 6 of 9)	Lx7|LINE|L1	-31044	NR_040368	100503106	Mm.443215	NR_040368	ENSMUSG00000085845	Gm13944	OTTMUSG00000015155	predicted gene 13944	ncRNA
common_peak2-31359-16-8-0.948338640825749-1.02063122982878	chr8	84751758	84752203	+	0	NA	Intergenic	Lx8|LINE|L1	174505	NM_001254747	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak1-14072-58-52-0.568029480327298-1.51813377769486	chr2	120976650	120977987	+	0	NA	intron (NM_029475, intron 7 of 9)	intron (NM_029475, intron 7 of 9)	9489	NM_029475	75894	Mm.384805	NM_029475	ENSMUSG00000027259	Adal	4930578F03Rik	adenosine deaminase-like	protein-coding
common_peak1-9148-9-23--1.39534909431694-1.67711336403294	chr11	76497523	76498048	+	0	NA	intron (NM_177709, intron 1 of 2)	B1_Mus1|SINE|Alu	4410	NM_177709	237858	Mm.127006	NM_177709	ENSMUSG00000046275	Tusc5	C130069F04Rik|DSPB1|Lost1	tumor suppressor candidate 5	protein-coding
common_peak1-9740-18-11-0.727956650507195-0.876666802405043	chr12	49381575	49382357	+	0	NA	Intergenic	Intergenic	-1101904	NM_001160112	15228	Mm.4704	NM_008241	ENSMUSG00000020950	Foxg1	2900064B05Rik|BF-1|Bf1|Hfh9|Hfhbf1	forkhead box G1	protein-coding
common_peak1-18152-10-10--0.103016273628528-0.301029995663987	chr8	11555385	11555986	+	0	NA	promoter-TSS (NM_011919)	promoter-TSS (NM_011919)	-381	NM_011919	26356	Mm.25709	NM_011919	ENSMUSG00000045969	Ing1	2610028J21Rik|AA407184|AI875420|mING1h|p33Ing1|p37Ing1b	inhibitor of growth family, member 1	protein-coding
common_peak2-25751-14-7-0.899216160357645-0.947446088118041	chr19	29215846	29216364	+	0	NA	intron (NM_021525, intron 8 of 8)	intron (NM_021525, intron 8 of 8)	6336	NR_029778	724062		NR_029778		Mir101b	Mirn101b|mir-101b	microRNA 101b	ncRNA
common_peak2-21657-11-7-0.508693584251613-1.21681515183528	chr11	102643232	102643634	+	0	NA	Intergenic	MTC|LTR|MaLR	20680	NM_001110778	11488	Mm.89854	NM_009613	ENSMUSG00000020926	Adam11	AW060611|Mdc	a disintegrin and metallopeptidase domain 11	protein-coding
common_peak1-7962-9-15--0.81038659359578-0.630231561310125	chr1	155158706	155159254	+	0	NA	intron (NM_010683, intron 1 of 27)	B1_Mur4|SINE|Alu	20936	NM_010683	226519	Mm.1249	NM_010683	ENSMUSG00000026478	Lamc1	Lamb2	laminin, gamma 1	protein-coding
common_peak1-14037-29-40--0.245261924002973-0.373466121463214	chr2	118109728	118111286	+	0	NA	intron (NM_201367, intron 1 of 2)	intron (NM_201367, intron 1 of 2)	-20143	NR_045919	73358	Mm.437192	NR_045919	ENSMUSG00000085889	1700054M17Rik	-	RIKEN cDNA 1700054M17 gene	ncRNA
common_peak2-29559-99-111-0.412002821225047-1.51136303463421	chr6	43264837	43266903	+	0	NA	Intergenic	Intergenic	-6317	NM_130869	18291	Mm.17715	NM_130869	ENSMUSG00000029736	Nobox	OG2|Og2x	NOBOX oogenesis homeobox	protein-coding
common_peak2-30883-9-8-0.0196884049619079-1.03275496310833	chr7	141339132	141339605	+	0	NA	intron (NM_007400, intron 2 of 22)	intron (NM_007400, intron 2 of 22)	77412	NM_007400	11489	Mm.439714	NM_007400	ENSMUSG00000054555	Adam12	Mltna|mKIAA4001	a disintegrin and metallopeptidase domain 12 (meltrin alpha)	protein-coding
common_peak2-28414-58-118--0.598867828417447-1.98870966170213	chr4	141546114	141547228	+	0	NA	intron (NM_177868, intron 3 of 31)	intron (NM_177868, intron 3 of 31)	7764	NR_040672	545691	Mm.332015	NR_040672	ENSMUSG00000085424	Fhad1os1	Gm13037|OTTMUSG00000010113	forkhead-associated (FHA) phosphopeptide binding domain 1, opposite strand 1	ncRNA
common_peak2-25119-33-52--0.39658289203767-0.641883003087205	chr18	38418698	38419764	+	0	NA	intron (NM_024179, intron 10 of 12)	intron (NM_024179, intron 10 of 12)	-9012	NR_027904	73516	Mm.48776	NR_015475	ENSMUSG00000097080	1700086O06Rik	-	RIKEN cDNA 1700086O06 gene	ncRNA
common_peak2-27891-24-33--0.294252938482622-0.390124689062463	chr4	136461698	136462910	+	0	NA	Intergenic	ID_B1|SINE|B4	-7545	NM_007572	12259	Mm.439957	NM_007572	ENSMUSG00000036887	C1qa	AI255395|C1q	complement component 1, q subcomponent, alpha polypeptide	protein-coding
common_peak2-23216-9-5-0.604650905683064-1.21398586181642	chr15	3300774	3301027	+	0	NA	intron (NM_001286370, intron 3 of 10)	intron (NM_001286370, intron 3 of 10)	-47374	NM_001166063	100039139	Mm.455610	NM_001166063	ENSMUSG00000091119	Ccdc152	ENSMUSG00000071814	coiled-coil domain containing 152	protein-coding
common_peak2-26736-10-8-0.186490343566457-1.078512453669	chr2	132092419	132092898	+	0	NA	intron (NM_138651, intron 1 of 12)	intron (NM_138651, intron 1 of 12)	3774	NM_138651	110911	Mm.284503	NM_138651	ENSMUSG00000058793	Cds2	5730450N06Rik|5730460C18Rik|AI854580|D2Wsu127e	CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2	protein-coding
common_peak1-16563-34-66--0.684020663456506-1.46887387725851	chr5	145280478	145281316	+	0	NA	Intergenic	Intergenic	-25859	NM_016789	53324	Mm.10099	NM_016789	ENSMUSG00000059991	Nptx2	Narp|np2	neuronal pentraxin 2	protein-coding
common_peak2-29875-30-25-0.469235691350781-0.734130039933318	chr6	108668166	108668985	+	0	NA	Intergenic	Intergenic	-57647	NR_104577	75394	Mm.395061	NR_040757	ENSMUSG00000087341	0610040F04Rik	-	RIKEN cDNA 0610040F04 gene	ncRNA
unique_peak2-37398-7-10--0.660340788339108-1.12966497611638	chr4	141303833	141304395	+	0	NA	intron (NM_001081408, intron 1 of 6)	B3|SINE|B2	1524	NM_001081408	75986	Mm.30032	NM_001081408	ENSMUSG00000040706	Agmat	5033405N08Rik	agmatine ureohydrolase (agmatinase)	protein-coding
unique_peak1-4711-14-2-2.31425365963649-3.28500101358144	chr3	103056785	103057439	+	0	NA	Intergenic	Intergenic	-26104	NM_053170	94093	Mm.195036	NM_053170	ENSMUSG00000033014	Trim33	8030451N04Rik|AI413936|Ecto|Tif1g	tripartite motif-containing 33	protein-coding
unique_peak1-5734-12-1-2.64877598508764-3.36932189928148	chr6	43641381	43642014	+	0	NA	Intergenic	L1M4|LINE|L1	-25523	NM_013861	29807	Mm.320979	NM_013861	ENSMUSG00000029735	Tpk1	-	thiamine pyrophosphokinase	protein-coding
common_peak1-9811-46-17-1.72807094180649-5.8272605099587	chr12	69514571	69516485	+	0	NA	Intergenic	Intergenic	744645	NM_009093	20090	Mm.379006	NM_009093	ENSMUSG00000034892	Rps29	-	ribosomal protein S29	protein-coding
unique_peak1-2696-14-0-3.89921616035764-4.8164799306237	chr16	86137971	86138575	+	0	NA	Intergenic	RMER16|LTR|ERVK	-236903	NM_011782	23794	Mm.112933	NM_011782	ENSMUSG00000022894	Adamts5	9530092O11Rik|ADAM-TS5|ADAMTS1|ADAMTS11|AI481094|ASMP-2	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 5 (aggrecanase-2)	protein-coding
unique_peak1-1776-14-3-1.89921616035764-2.80787975886178	chr14	43925179	43925914	+	0	NA	Intergenic	Intergenic	100798	NM_027940	71826	Mm.335855	NM_027940	ENSMUSG00000095384	1700001F09Rik	Gm10377	RIKEN cDNA 1700001F09 gene	protein-coding
unique_peak2-37728-3-5--0.998945590680433-0.96108193396963	chr5	107889981	107890379	+	0	NA	intron (NM_001255991, intron 3 of 8)	intron (NM_001255991, intron 3 of 8)	23164	NM_001255991	100503185	Mm.366650	NM_001255991	ENSMUSG00000070632	Btbd8	EG627196|Gm16115|OTTMUSG00000030610	BTB (POZ) domain containing 8	protein-coding
common_peak2-26774-69-68-0.486617990480563-1.41359277277622	chr2	144009808	144011306	+	0	NA	intron (NM_001033778, intron 1 of 3)	intron (NM_001033778, intron 1 of 3)	4469	NM_001033778	433481	Mm.330630	NM_001033778		Gm5535	EG433481	predicted gene 5535	protein-coding
common_peak2-21727-40-34-0.529692665806132-1.04433310181892	chr11	113649172	113650395	+	0	NA	intron (NM_172800, intron 44 of 44)	intron (NM_172800, intron 44 of 44)	-36654	NM_001163346	56699	Mm.293378	NM_020006	ENSMUSG00000041598	Cdc42ep4	1500041M20Rik|Borg4|CEP4	CDC42 effector protein (Rho GTPase binding) 4	protein-coding
common_peak2-28038-14-22--0.624345795699369-0.590343908676233	chr4	57142622	57143605	+	0	NA	intron (NM_019427, intron 1 of 15)	intron (NM_019427, intron 1 of 15)	12915	NM_019427	54357	Mm.28217	NM_019427	ENSMUSG00000028434	Epb4.1l4b	6430543G08Rik|AA589614|AU021054|BB007528|D4Ertd346e|Ehm2|Epb41l4b|Lulu2	erythrocyte protein band 4.1-like 4b	protein-coding
unique_peak1-1285-12-7-0.648775985087639-0.697979855752659	chr11	118412779	118413363	+	0	NA	intron (NM_001285436, intron 3 of 13)	intron (NM_001285436, intron 3 of 13)	74797	NM_172573	217364	Mm.473963	NM_172573	ENSMUSG00000033857	Engase	C130099A03|D230014K01Rik	endo-beta-N-acetylglucosaminidase	protein-coding
unique_peak1-4154-8-3-1.00522241794757-1.39487600375387	chr2	101827662	101828098	+	0	NA	intron (NM_178886, intron 4 of 5)	intron (NM_178886, intron 4 of 5)	101461	NM_029635	76501	Mm.330424	NM_029635	ENSMUSG00000027163	Commd9	1810029F08Rik|AA409293	COMM domain containing 9	protein-coding
common_peak1-12185-18-21--0.146512467408946-0.306326795069975	chr17	31873857	31874710	+	0	NA	Intergenic	Intergenic	59407	NM_001278570	12954	Mm.1228	NM_013501	ENSMUSG00000024041	Cryaa	Acry-1|Crya-1|Crya1|DAcry-1|lop18	crystallin, alpha A	protein-coding
common_peak1-12547-24-32--0.251184216590737-0.358978896303361	chr18	6136274	6137092	+	0	NA	promoter-TSS (NM_029277)	promoter-TSS (NM_029277)	-587	NM_001039692	75415	Mm.239675	NM_029277	ENSMUSG00000041225	Arhgap12	2810011M08Rik	Rho GTPase activating protein 12	protein-coding
unique_peak2-38263-3-6--1.22133801201688-1.08602067057793	chr6	125469310	125469742	+	0	NA	Intergenic	Intergenic	-24753	NM_007657	12527	Mm.210676	NM_007657	ENSMUSG00000030342	Cd9	Tspan29	CD9 antigen	protein-coding
unique_peak1-1338-8-3-1.00522241794757-1.39487600375387	chr12	10898994	10899559	+	0	NA	Intergenic	Intergenic	-155343	NR_045860	71457	Mm.95280	NR_045860		7420701I03Rik	-	RIKEN cDNA 7420701I03 gene	ncRNA
common_peak2-27450-28-53--0.701928382342006-1.32032392063167	chr3	90247685	90248690	+	0	NA	Intergenic	Intergenic	-10629	NM_178876	229543	Mm.268564	NM_145540	ENSMUSG00000027933	Ints3	C77668	integrator complex subunit 3	protein-coding
unique_peak1-5464-18-6-1.50556422917075-2.02801025126771	chr5	123670556	123671329	+	0	NA	Intergenic	RLTR11A2|LTR|ERVK	-7257	NM_026000	67151	Mm.278997	NM_026000	ENSMUSG00000029440	Psmd9	1500011J20Rik|2610202L11Rik|Bridge-1|P27	proteasome (prosome, macropain) 26S subunit, non-ATPase, 9	protein-coding
common_peak2-22558-10-8-0.186490343566457-1.078512453669	chr13	63163935	63164435	+	0	NA	intron (NM_001289926, intron 4 of 15)	intron (NM_001289926, intron 4 of 15)	97932	NM_001289924	72061	Mm.188105	NM_028079	ENSMUSG00000021458	2010111I01Rik	2300006M17Rik|AP-O|Aopep	RIKEN cDNA 2010111I01 gene	protein-coding
unique_peak1-3066-17-7-1.21829633820504-1.55050753388977	chr18	10935742	10936579	+	0	NA	Intergenic	Intergenic	-116348	NM_010258	14465	Mm.329287	NM_010258	ENSMUSG00000005836	Gata6	AA410133|GATA-6	GATA binding protein 6	protein-coding
common_peak1-10437-16-11-0.533301141546906-0.58239619684445	chr13	102905307	102905977	+	0	NA	Intergenic	Intergenic	-367470	NM_001077495	18708	Mm.259333	NM_001024955	ENSMUSG00000041417	Pik3r1	PI3K|p50alpha|p55alpha|p85alpha	phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)	protein-coding
common_peak2-26281-16-37--1.12966387117552-1.94848218498813	chr2	30807720	30808562	+	0	NA	promoter-TSS (NM_133673)	promoter-TSS (NM_133673)	-380	NM_133673	30934	Mm.249164	NM_133673	ENSMUSG00000026848	Tor1b	2610016F05Rik|DQ1|torsinB	torsin family 1, member B	protein-coding
unique_peak2-38962-2-4--1.23938235115068-0.931118710592187	chr8	32213873	32214298	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-8233	NM_175136	68867	Mm.29532	NM_175136	ENSMUSG00000039328	Rnf122	1110063C11Rik	ring finger protein 122	protein-coding
common_peak2-27878-14-16--0.188246680892695-0.308035960714963	chr4	41712932	41713759	+	0	NA	intron (NM_001163401, intron 8 of 12)	intron (NM_001163401, intron 8 of 12)	3740	NM_011336	20301	Mm.335946	NM_011336	ENSMUSG00000073888	Ccl27a	ALP|AW558992|CTACK|CTAK|Ccl27|ESkine|ILC|PESKY|Scya27|Scya27a	chemokine (C-C motif) ligand 27A	protein-coding
unique_peak2-37532-8-10--0.454209200689727-1.078512453669	chr5	24586765	24587364	+	0	NA	intron (NM_145401, intron 1 of 15)	B4A|SINE|B4	19396	NM_145401	108099	Mm.33649	NM_145401	ENSMUSG00000028944	Prkag2	2410051C13Rik|AAKG|AAKG2|AI854673|H91620p|WPWS	protein kinase, AMP-activated, gamma 2 non-catalytic subunit	protein-coding
common_peak1-12500-127-178-0.1675707340638-0.604305726914779	chr17	88064095	88066289	+	0	NA	Intergenic	Intergenic	-6705	NM_008628	17685	Mm.4619	NM_008628	ENSMUSG00000024151	Msh2	AI788990	mutS homolog 2 (E. coli)	protein-coding
common_peak1-17124-13-15--0.221527969362231-0.308519316180257	chr6	115492938	115493540	+	0	NA	Intergenic	ID4|SINE|ID	-1483	NM_199033	381802	Mm.291208	NM_199033	ENSMUSG00000042389	Tsen2	AU067695	tRNA splicing endonuclease 2 homolog (S. cerevisiae)	protein-coding
unique_peak2-39003-5-7--0.704380336005853-1.01466476204226	chr8	46867475	46867935	+	0	NA	intron (NM_172752, intron 12 of 22)	intron (NM_172752, intron 12 of 22)	36946	NR_045739	319940	Mm.441720	NR_045739	ENSMUSG00000085440	Sorbs2os	D330022K07Rik	sorbin and SH3 domain containing 2, opposite strand	ncRNA
unique_peak2-34198-3-8--1.58390809140159-1.39487600375387	chr13	38310736	38311134	+	0	NA	intron (NM_026382, intron 6 of 8)	intron (NM_026382, intron 6 of 8)	14127	NM_026382	67797	Mm.250783	NM_026382	ENSMUSG00000021431	Snrnp48	1110050F08Rik|6530403A03Rik|C6orf151	small nuclear ribonucleoprotein 48 (U11/U12)	protein-coding
common_peak2-22980-14-6-1.09186123830004-1.16633110333236	chr14	55559457	55559853	+	0	NA	Intergenic	Intergenic	4321	NM_029390	67272	Mm.41614	NM_026066	ENSMUSG00000040759	Cmtm5	1500005P16Rik|2900052H21Rik|Cklfsf5	CKLF-like MARVEL transmembrane domain containing 5	protein-coding
common_peak2-23992-27-27-0.184191028837632-0.393151991482004	chr16	18687087	18687709	+	0	NA	Intergenic	Intergenic	-57367	NM_213614	18951	Mm.20365	NM_213614	ENSMUSG00000072214	Sept5	Cdcrel-1|Cdcrel1|Pnutl1	septin 5	protein-coding
common_peak1-15372-29-34--0.0169929363298555-0.304177167304369	chr4	59330893	59331849	+	0	NA	intron (NM_001163288, intron 15 of 16)	intron (NM_001163288, intron 15 of 16)	58448	NR_105031	101055769	Mm.421401	NR_105031		LOC101055769	-	uncharacterized LOC101055769	ncRNA
common_peak2-21934-11-6-0.701338662194009-1.32595962126035	chr12	25110830	25111167	+	0	NA	Intergenic	IAPLTR3-int|LTR|ERVK	-72448	NM_020614	21340	Mm.39082	NM_020614	ENSMUSG00000059669	Taf1b	4930408G01Rik|A230108M10Rik|TAFI68|Tafi86	TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B	protein-coding
common_peak2-28241-12-18--0.599151528355947-0.476916024233333	chr4	123422522	123423102	+	0	NA	intron (NM_023423, intron 1 of 4)	intron (NM_023423, intron 1 of 4)	4730	NM_023423	68050	Mm.27903	NM_023423		Akirin1	6330407G11Rik	akirin 1	protein-coding
unique_peak2-36645-12-12--0.0516637330534535-0.309718203022949	chr3	9665525	9666223	+	0	NA	Intergenic	Intergenic	-55789	NM_133218	170753	Mm.212908	NM_133218	ENSMUSG00000040209	Zfp704	C030026M03|C030034L19Rik|Gig1|Znf704	zinc finger protein 704	protein-coding
unique_peak1-412-11-3-1.50869358425161-1.95434855131066	chr1	157086422	157086888	+	0	NA	Intergenic	Intergenic	80822	NM_021433	58244	Mm.66264	NM_021433	ENSMUSG00000026470	Stx6	2310039E05Rik|2410005I16Rik|AA437559|AI415714|AI845861	syntaxin 6	protein-coding
unique_peak1-2860-13-0-3.77847203063777-4.51544993495972	chr17	33646245	33646865	+	0	NA	Intergenic	ORR1B1|LTR|MaLR	-14586	NR_037707	224697	Mm.29304	NM_172619	ENSMUSG00000024299	Adamts10	9430006O18|AW045948|Adam-ts10|Adamts-10|Znmp	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10	protein-coding
common_peak2-20531-45-92--0.678800785763159-1.98914422935047	chr10	62791462	62793283	+	0	NA	intron (NM_001159589, intron 3 of 7)	intron (NM_001159589, intron 3 of 7)	9408	NM_019812	93759	Mm.351459	NM_019812	ENSMUSG00000020063	Sirt1	AA673258|SIR2L1|Sir2|Sir2a|Sir2alpha	sirtuin 1	protein-coding
unique_peak2-36564-3-8--1.58390809140159-1.39487600375387	chr2	169743626	169744100	+	0	NA	Intergenic	RMER20B|LTR|ERVK	152308	NR_033634	100043910	Mm.468546	NR_033632	ENSMUSG00000097065	A630075F10Rik	4831414D02|Gm4722	RIKEN cDNA A630075F10 gene	ncRNA
common_peak1-11911-13-19--0.543456064249594-0.466170754204149	chr17	27819567	27820247	+	0	NA	intron (NM_001286744, intron 1 of 9)	intron (NM_001286744, intron 1 of 9)	-2277	NM_178365	23969	Mm.4926	NM_011861	ENSMUSG00000040276	Pacsin1	A830061D09Rik|H74|mKIAA1379|syndapin	protein kinase C and casein kinase substrate in neurons 1	protein-coding
common_peak1-12199-15-13-0.204809828498052-0.368541233333383	chr17	32891055	32891761	+	0	NA	Intergenic	RLTR9A|LTR|ERVK	33824	NM_172458	208292	Mm.38813	NM_172458		Zfp871	4732483N19|9030612M13Rik|AI118577|AI265322|mKIAA3006	zinc finger protein 871	protein-coding
common_peak1-11517-18-12-0.612479433087259-0.739965416525508	chr16	49970567	49971570	+	0	NA	Intergenic	Intergenic	-9505	NR_045001	628951	Mm.428032	NR_045001		Gm6936	-	predicted gene 6936	ncRNA
unique_peak1-3734-8-3-1.00522241794757-1.39487600375387	chr19	46926290	46926877	+	0	NA	intron (NM_001102471, intron 1 of 6)	B4A|SINE|B4	90484	NM_001102471	94219	Mm.306903	NM_033569	ENSMUSG00000064105	Cnnm2	AU015877|AW048635|Acdp2|Clp2	cyclin M2	protein-coding
unique_peak1-988-13-6-0.971117108580164-1.01572999746118	chr11	69063648	69064354	+	0	NA	Intergenic	Lx8|LINE|L1	-13477	NM_008192	14919	Mm.291816	NM_008192	ENSMUSG00000020890	Gucy2e	GC-E|GC1|ROS-GC1	guanylate cyclase 2e	protein-coding
unique_peak1-2250-33-6-2.52398264046792-6.41285669427506	chr15	77339021	77340564	+	0	NA	intron (NM_001177533, intron 1 of 3)	intron (NM_001177533, intron 1 of 3)	1091	NM_001177533	626615	Mm.390820	NM_001177533	ENSMUSG00000091650	Apol11a	EG626615	apolipoprotein L 11a	protein-coding
unique_peak2-33538-6-8--0.60452689106201-1.03789460276074	chr11	78094539	78094969	+	0	NA	intron (NM_001002004, intron 26 of 38)	intron (NM_001002004, intron 26 of 38)	-9589	NM_001287206	216976	Mm.477146	NM_001045522		BC030499	BC037104|Sgk494	cDNA sequence BC030499	protein-coding
unique_peak1-4526-9-5-0.604650905683064-1.21398586181642	chr3	30480431	30480953	+	0	NA	Intergenic	Intergenic	18100	NM_029690	76652	Mm.116928	NM_029690	ENSMUSG00000037737	Actrt3	1700119I24Rik|ARP-T3|Arpm1	actin related protein T3	protein-coding
common_peak2-26521-23-29--0.185123091099438-0.336580821310529	chr2	91069828	91071136	+	0	NA	intron (NM_028119, intron 3 of 9)	intron (NM_028119, intron 3 of 9)	6741	NM_028119	107986	Mm.389334	NM_028119	ENSMUSG00000002109	Ddb2	2610043A19Rik	damage specific DNA binding protein 2	protein-coding
common_peak2-32201-22-24-0.00342791531268016-0.305461879681376	chr9	120001618	120002229	+	0	NA	intron (NM_007720, intron 1 of 1)	B4|SINE|B4	672	NM_007720	12776	Mm.442098	NM_007720	ENSMUSG00000042262	Ccr8	C-C|C-C CKR-8|CC-CKR-8|CCR-8|CKR-8|Cmkbr8|mCCR8	chemokine (C-C motif) receptor 8	protein-coding
common_peak1-18513-72-106--0.0728831735288287-0.317734659298839	chr8	88361443	88362654	+	0	NA	intron (NM_028007, intron 2 of 17)	ORR1B1|LTR|MaLR	2800	NM_028007	71927	Mm.61018	NM_028007	ENSMUSG00000031703	Itfg1	2310047C21Rik|AI314457|Cda08|D8Wsu49e	integrin alpha FG-GAP repeat containing 1	protein-coding
common_peak1-14273-88-133--0.0506767812872395-0.314291411079304	chr2	156391966	156393284	+	0	NA	exon (NM_026661, exon 4 of 4)	exon (NM_026661, exon 4 of 4)	19313	NM_001164818	68295	Mm.253648	NM_026661	ENSMUSG00000027628	Aar2	0610011L14Rik	AAR2 splicing factor homolog (S. cerevisiae)	protein-coding
common_peak2-31348-18-24--0.330937038546373-0.380101753845076	chr8	84248994	84249858	+	0	NA	intron (NM_001024617, intron 3 of 24)	L1Md_T|LINE|L1	382965	NM_001297593	234515	Mm.324468	NM_001024617	ENSMUSG00000037940	Inpp4b	E130107I17Rik	inositol polyphosphate-4-phosphatase, type II	protein-coding
common_peak1-13108-62-42-0.984486704099987-3.52584576600981	chr19	8773986	8775596	+	0	NA	Intergenic	(TTTC)n|Simple_repeat|Simple_repeat	13596	NM_008577	17254	Mm.4114	NM_008577	ENSMUSG00000010095	Slc3a2	4F2|4F2HC|AI314110|Cd98|Ly-10|Ly-m10|Ly10|Mdu1|Mgp-2hc|NACAE	solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2	protein-coding
common_peak2-26918-14-14--0.00767443525087419-0.308519316180257	chr2	163491326	163491891	+	0	NA	intron (NM_001039390, intron 2 of 4)	intron (NM_001039390, intron 2 of 4)	7414	NM_001164053	18769	Mm.10091	NM_011106	ENSMUSG00000035268	Pkig	PKIgamma	protein kinase inhibitor, gamma	protein-coding
common_peak2-29409-4-7--1.02346051385325-1.09384600808989	chr6	128286317	128286727	+	0	NA	intron (NM_011657, intron 2 of 10)	B1_Mur4|SINE|Alu	19347	NM_011657	22158	Mm.291783	NM_011657	ENSMUSG00000001521	Tulp3	2310022L06Rik|AI316887	tubby-like protein 3	protein-coding
unique_peak1-3495-32-9-1.9571639243323-4.69059265249427	chr19	12462937	12464083	+	0	NA	Intergenic	Intergenic	-5245	NM_146684	258679	Mm.271520	NM_146684	ENSMUSG00000046650	Olfr1440	MOR215-1	olfactory receptor 1440	protein-coding
unique_peak1-784-17-0-4.21829633820504-6.02059991327962	chr11	53903335	53904303	+	0	NA	Intergenic	Intergenic	-10607	NM_001136076	18452	Mm.3705	NM_011031	ENSMUSG00000018906	P4ha2	AA407196|C76437|P4hl	procollagen-proline, 2-oxoglutarate 4-dioxygenase (proline 4-hydroxylase), alpha II polypeptide	protein-coding
unique_peak1-3995-11-6-0.701338662194009-1.32595962126035	chr2	35250208	35250888	+	0	NA	intron (NM_001080709, intron 1 of 5)	PB1D10|SINE|Alu	2146	NM_001080709	74854	Mm.159338	NM_001080709	ENSMUSG00000079421	4930402F06Rik	-	RIKEN cDNA 4930402F06 gene	protein-coding
unique_peak1-956-8-5-0.420259917226415-1.10484139239135	chr11	59942426	59942921	+	0	NA	intron (NM_009021, intron 1 of 5)	L2b|LINE|L2	-10911	NM_001037764	19377	Mm.296366	NM_009021	ENSMUSG00000062115	Rai1	Gt1	retinoic acid induced 1	protein-coding
unique_peak2-35931-2-6--1.72480917832092-1.26211192963361	chr19	7480378	7480764	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-11544	NM_175381	108899	Mm.386838	NM_175381	ENSMUSG00000053080	2700081O15Rik	AI255177|AI848741|AW742297	RIKEN cDNA 2700081O15 gene	protein-coding
common_peak1-11525-20-42--0.938189970110905-1.68120055799038	chr16	3744127	3745026	+	0	NA	exon (NM_148924, exon 1 of 6)	exon (NM_148924, exon 1 of 6)	477	NM_148924	74120	Mm.29081	NM_148924	ENSMUSG00000022529	Zfp263	1200014J04Rik|AI326880|AU020888|NT2|mFPM315	zinc finger protein 263	protein-coding
common_peak1-9935-27-16-0.904083109644897-1.48160942223867	chr12	106045907	106047190	+	0	NA	intron (NM_053155, intron 1 of 13)	intron (NM_053155, intron 1 of 13)	-56386	NM_148948	192119	Mm.21135	NM_148948	ENSMUSG00000041415	Dicer1	1110006F08Rik|D12Ertd7e|mKIAA0928	dicer 1, ribonuclease type III	protein-coding
unique_peak1-2981-10-6-0.549060422951165-1.21398586181642	chr17	78108139	78108713	+	0	NA	Intergenic	Intergenic	-491162	NM_015800	50766	Mm.311912	NM_015800	ENSMUSG00000024074	Crim1	AU015004	cysteine rich transmembrane BMP regulator 1 (chordin like)	protein-coding
common_peak2-25088-11-6-0.701338662194009-1.32595962126035	chr18	36365496	36366086	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-8977	NM_001167891	100042150	Mm.380390	NM_001167891	ENSMUSG00000060275	Nrg2	Don1|NTAK	neuregulin 2	protein-coding
unique_peak2-34360-4-7--1.02346051385325-1.09384600808989	chr13	104178722	104179313	+	0	NA	Intergenic	Intergenic	-54445	NM_175171	328329	Mm.202606	NM_175171	ENSMUSG00000034751	Mast4	4930420O11Rik|AI642422|mKIAA0303	microtubule associated serine/threonine kinase family member 4	protein-coding
common_peak1-17368-34-20-0.989751104222505-2.03367508793052	chr7	64191900	64193407	+	0	NA	intron (NM_008074, intron 5 of 9)	Lx8|LINE|L1	449588	NM_008074	14407	Mm.434343	NM_008074		Gabrg3	B230362M20Rik|Gabrg-3	gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3	protein-coding
common_peak1-9423-7-12--0.901348887842903-1.31827279259406	chr11	101417334	101417727	+	0	NA	exon (NM_008676, exon 4 of 24)	exon (NM_008676, exon 4 of 24)	3562	NM_001252223	17966	Mm.784	NM_008676	ENSMUSG00000017119	Nbr1	mKIAA0049	neighbor of Brca1 gene 1	protein-coding
common_peak2-21923-26-43--0.531532526478835-0.806432121853421	chr12	17544708	17545615	+	0	NA	Intergenic	Intergenic	-6518	NM_013614	18263	Mm.34102	NM_013614	ENSMUSG00000011179	Odc1	ODC	ornithine decarboxylase, structural 1	protein-coding
common_peak1-9304-71-42-1.21817942401787-5.59881467426711	chr11	93986532	93988640	+	0	NA	TTS (NM_001025429)	TTS (NM_001025429)	82067	NM_001025429	70834	Mm.260737	NM_027569	ENSMUSG00000020859	Spag9	3110018C07Rik|4733401I23Rik|4831406C20Rik|AW552012|JLP|JSAP2|JSAP2a|Jip4|Mapk8ip4|syd1	sperm associated antigen 9	protein-coding
common_peak1-13271-15-17--0.157760250886656-0.307611222530528	chr19	36918423	36919227	+	0	NA	intron (NM_001163635, intron 1 of 26)	intron (NM_001163635, intron 1 of 26)	10103	NM_001163635	74493	Mm.249310	NM_001163635	ENSMUSG00000024811	Tnks2	5430432P15Rik|AA517131|AI662480|ARTD6|TNKS-2|Tank2	tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2	protein-coding
common_peak2-31667-12-10-0.189344366450341-0.386243247519795	chr8	126774366	126774936	+	0	NA	intron (NM_139272, intron 1 of 15)	intron (NM_139272, intron 1 of 15)	19357	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
common_peak1-12501-50-83--0.351377106299808-0.723126769145835	chr17	88255804	88257024	+	0	NA	Intergenic	MMETn-int|LTR|ERVK	-59080	NM_199251	210741	Mm.312046	NM_199251	ENSMUSG00000050138	Kcnk12	mntk1	potassium channel, subfamily K, member 12	protein-coding
common_peak1-17030-11-15--0.491306415748387-0.435191258261915	chr6	91688868	91689442	+	0	NA	intron (NM_009320, intron 6 of 14)	PB1D7|SINE|Alu	55094	NM_009320	21366	Mm.395650	NM_009320	ENSMUSG00000030096	Slc6a6	AA589629|C80501|Taut	solute carrier family 6 (neurotransmitter transporter, taurine), member 6	protein-coding
unique_peak2-37574-3-8--1.58390809140159-1.39487600375387	chr5	35733993	35734431	+	0	NA	intron (NM_010445, intron 1 of 1)	intron (NM_010445, intron 1 of 1)	2446	NM_010445	15371	Mm.358606	NM_010445	ENSMUSG00000067438	Hmx1	Nkx5-3	H6 homeobox 1	protein-coding
common_peak2-24385-12-6-0.841421063030034-1.58711810488664	chr17	12769136	12769549	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-7713	NM_013667	20518	Mm.17322	NM_013667	ENSMUSG00000040966	Slc22a2	Oct2|Orct2	solute carrier family 22 (organic cation transporter), member 2	protein-coding
common_peak1-12851-73-92-0.153236195317191-0.435844194873109	chr18	75000056	75001437	+	0	NA	Intergenic	Intergenic	61880	NM_177470	52538	Mm.245724	NM_177470	ENSMUSG00000036880	Acaa2	0610011L04Rik|AI255831|AI265397|D18Ertd240e	acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase)	protein-coding
common_peak1-13123-55-111--0.602735050904902-1.91880734435424	chr19	8989063	8990898	+	0	NA	exon (NM_001293621, exon 23 of 24)	exon (NM_001293621, exon 23 of 24)	-4903	NM_024256	72727	Mm.259	NM_024256	ENSMUSG00000071649	B3gat3	2810405M13Rik	beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)	protein-coding
common_peak2-26174-9-18--1.05831410703937-0.965105923112245	chr2	21205700	21206175	+	0	NA	Intergenic	Intergenic	78586	NM_177588	208967	Mm.268841	NM_177588	ENSMUSG00000048550	Thnsl1	AW413632	threonine synthase-like 1 (bacterial)	protein-coding
common_peak1-12145-12-5-1.06381348436648-1.78669045979184	chr17	27909759	27910348	+	0	NA	intron (NM_001033279, intron 3 of 4)	intron (NM_001033279, intron 3 of 4)	-44157	NM_013891	30051	Mm.26768	NM_013891	ENSMUSG00000024215	Spdef	PDEF|Pse	SAM pointed domain containing ets transcription factor	protein-coding
unique_peak2-33391-9-9--0.132314688483142-1.03275496310833	chr11	50252272	50252777	+	0	NA	Intergenic	B4A|SINE|B4	-7911	NM_172557	216724	Mm.390400	NM_172557	ENSMUSG00000020375	Rufy1	3000002E04Rik|Rabip4|ZFYVE12	RUN and FYVE domain containing 1	protein-coding
unique_peak2-38612-4-7--1.02346051385325-1.09384600808989	chr7	80167182	80167595	+	0	NA	Intergenic	(CAGA)n|Simple_repeat|Simple_repeat	79566	NR_046024	625243	Mm.261798	NR_046024		Gm6567	-	predicted gene 6567	ncRNA
unique_peak2-37363-3-7--1.41398308995928-1.23214870625617	chr4	135856163	135856578	+	0	NA	Intergenic	(CAA)n|Simple_repeat|Simple_repeat	-10487	NM_001277122	74326	Mm.31051	NM_028871	ENSMUSG00000066037	Hnrnpr	2610003J05Rik|2610528B01Rik|Hnrpr	heterogeneous nuclear ribonucleoprotein R	protein-coding
unique_peak1-5084-10-6-0.549060422951165-1.21398586181642	chr4	144960494	144961133	+	0	NA	Intergenic	Intergenic	-55763	NM_009401	21941	Mm.12810	NM_009401	ENSMUSG00000028602	Tnfrsf8	Cd30|D1S166E|Ki|Ki-1	tumor necrosis factor receptor superfamily, member 8	protein-coding
common_peak2-27983-22-8-1.47735910364509-2.29727994934156	chr4	43631281	43631789	+	0	NA	Intergenic	Lx|LINE|L1	-13272	NM_173788	230103	Mm.103477	NM_173788	ENSMUSG00000028469	Npr2	GC-B|GC-B2|GC-B3|cn|mNPR-B|pwe	natriuretic peptide receptor 2	protein-coding
unique_peak2-38022-1-9--2.94898510510411-2.31132995230379	chr6	34493272	34493720	+	0	NA	Intergenic	Intergenic	67140	NM_007563	12183	Mm.282863	NM_007563	ENSMUSG00000038871	Bpgm	AI323730|AL022789|C86192	2,3-bisphosphoglycerate mutase	protein-coding
common_peak1-17735-38-39-0.249524564411168-0.503563708672202	chr7	80688106	80688998	+	0	NA	non-coding (NR_037569, exon 5 of 5)	non-coding (NR_037569, exon 5 of 5)	-1920	NM_001081345	244059	Mm.34539	NM_001081345	ENSMUSG00000078671	Chd2	2810013C04Rik|2810040A01Rik|5630401D06Rik|AI851092|BC029703|CHD-2	chromodomain helicase DNA binding protein 2	protein-coding
common_peak2-23709-15-13-0.204809828498052-0.368541233333383	chr15	89180715	89181378	+	0	NA	TTS (NM_178919)	TTS (NM_178919)	5044	NM_178919	105847	Mm.34511	NM_178919	ENSMUSG00000022614	Lmf2	AI451006|Tmem112b|Tmem153	lipase maturation factor 2	protein-coding
common_peak2-24594-17-12-0.517856620063946-0.647240723060192	chr17	31992945	31993547	+	0	NA	promoter-TSS (NM_010831)	promoter-TSS (NM_010831)	-509	NM_010831	17691	Mm.290941	NM_010831	ENSMUSG00000024042	Sik1	Msk|Sik|Snf1lk	salt inducible kinase 1	protein-coding
common_peak1-7478-37-57--0.331987923641753-0.556612435105728	chr1	182516610	182518064	+	0	NA	promoter-TSS (NR_105869)	promoter-TSS (NR_105869)	5	NR_105869	102466761		NR_105869		Mir6904	mmu-mir-6904	microRNA mir-6904	ncRNA
common_peak2-23807-26-28-0.0699180970308904-0.316008636696532	chr15	100468563	100469321	+	0	NA	Intergenic	Intergenic	-1571	NM_001033872	207818	Mm.26282	NM_174992	ENSMUSG00000053559	Smagp	-	small cell adhesion glycoprotein	protein-coding
common_peak1-9233-22-40--0.710267899530679-1.05951140195658	chr11	84880215	84881179	+	0	NA	intron (NM_001029934, intron 5 of 33)	IAPEz-int|LTR|ERVK	72760	NM_001029934	237898	Mm.178524	NM_001029934	ENSMUSG00000000804	Usp32	2900074J03Rik|6430526O11Rik|AW045245	ubiquitin specific peptidase 32	protein-coding
common_peak2-22543-52-75--0.139667523177886-0.355332524809432	chr13	58214832	58216361	+	0	NA	Intergenic	Intergenic	-11807	NM_001195075	100503085	Mm.379256	NM_001195075	ENSMUSG00000014164	Klhl3	7530408C15Rik|AI430941|EG627648	kelch-like 3	protein-coding
unique_peak2-38721-4-10--1.48289213249054-1.5150158574804	chr7	112202336	112202929	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-2130	NM_146358	258355	Mm.377452	NM_146358	ENSMUSG00000073914	Olfr677	MOR32-11	olfactory receptor 677	protein-coding
common_peak2-28124-68-67-0.482497938047957-1.35721122071865	chr4	93334805	93335956	+	0	NA	Intergenic	Lx2B|LINE|L1	-333178	NM_026954	69136	Mm.171558	NM_026954	ENSMUSG00000054000	Tusc1	2200001D17Rik|TSG-9	tumor suppressor candidate 1	protein-coding
common_peak1-15267-31-60--0.705498666749763-1.49662016474182	chr4	31963556	31964541	+	0	NA	Intergenic	MIRb|SINE|MIR	-87034	NM_009316	26409	Mm.258589	NM_009316	ENSMUSG00000028284	Map3k7	B430101B05|C87327|Tak1	mitogen-activated protein kinase kinase kinase 7	protein-coding
common_peak2-30242-80-122--0.0919387389698878-0.34593194661749	chr7	5014322	5015803	+	0	NA	intron (NM_001205231, intron 1 of 11)	intron (NM_001205231, intron 1 of 11)	1317	NM_001205231	22185	Mm.360389	NM_133671	ENSMUSG00000030435	U2af2	65kDa	U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2	protein-coding
unique_peak1-4041-8-1-2.00522241794757-2.05605744720049	chr2	59262172	59262687	+	0	NA	Intergenic	Intergenic	-37690	NR_040510	76676	Mm.110038	NR_040510	ENSMUSG00000087455	5330411J11Rik	-	RIKEN cDNA 5330411J11 gene	ncRNA
common_peak1-15822-104-92-0.765586390104127-4.12982659823979	chr5	98942443	98945401	+	0	NA	intron (NM_001024614, intron 3 of 5)	intron (NM_001024614, intron 3 of 5)	-39239	NR_030484	735265		NR_030484		Mir703	Mirn703|mmu-mir-703	microRNA 703	ncRNA
common_peak2-22651-13-22--0.745089925419244-0.690311289528838	chr13	94192631	94193345	+	0	NA	Intergenic	Intergenic	76775	NM_021310	57748	Mm.100273	NM_021310	ENSMUSG00000021690	Jmy	-	junction-mediating and regulatory protein	protein-coding
common_peak1-9297-15-35--1.15776025088666-1.87578206828671	chr11	88999386	89000202	+	0	NA	Intergenic	ID_B1|SINE|B4	64639	NM_001033266	217071	Mm.342127	NM_001033266	ENSMUSG00000072553	Gm525	-	predicted gene 525	protein-coding
common_peak2-22249-76-155--0.523457832998967-2.0504136492428	chr13	107888347	107891555	+	0	NA	Intergenic	Intergenic	77301	NR_015471	100040322	Mm.133867	NR_015471		3830408C21Rik	-	RIKEN cDNA 3830408C21 gene	ncRNA
unique_peak1-2856-8-2-1.42025991722641-1.65811743852845	chr17	32043621	32044143	+	0	NA	Intergenic	Intergenic	-51145	NM_010831	17691	Mm.290941	NM_010831	ENSMUSG00000024042	Sik1	Msk|Sik|Snf1lk	salt inducible kinase 1	protein-coding
common_peak2-30062-52-52-0.3803395357025-0.821390792595417	chr6	128760186	128760788	+	0	NA	Intergenic	PB1D10|SINE|Alu	15846	NM_030599	80782	Mm.6180	NM_030599	ENSMUSG00000079298	Klrb1b	Klrb1d|Ly55b|Ly55d|NKR-P1B|NKR-P1D|Nkrp1-b|Nkrp1d	killer cell lectin-like receptor subfamily B member 1B	protein-coding
unique_peak1-4276-14-1-2.89921616035764-3.91338994363176	chr2	137146411	137147192	+	0	NA	Intergenic	Intergenic	-204545	NM_013822	16449	Mm.22398	NM_013822	ENSMUSG00000027276	Jag1	ABE2|Gsfabe2|Htu|Ozz|Ser-1	jagged 1	protein-coding
common_peak1-10345-27-28-0.133564955767664-0.358978896303361	chr13	77708177	77709217	+	0	NA	intron (NM_001145676, intron 19 of 19)	L1Md_Gf|LINE|L1	-139254	NM_001163420	68675	Mm.343005	NM_138312	ENSMUSG00000064138	Fam172a	1110033M05Rik|2610318O14Rik|53-E6|9430037D06Rik|AF064782|pEN87	family with sequence similarity 172, member A	protein-coding
unique_peak2-38470-8-17--1.16470258349474-1.02063122982878	chr7	29237467	29238283	+	0	NA	intron (NM_001141921, intron 1 of 4)	intron (NM_001141921, intron 1 of 4)	618	NM_001141921	80749	Mm.483073	NM_030562		Lrfn1	BC004018|SALM2|Semo1	leucine rich repeat and fibronectin type III domain containing 1	protein-coding
common_peak2-20656-14-13-0.0918612383000403-0.332077462497413	chr10	82622660	82623214	+	0	NA	intron (NM_021439, intron 2 of 2)	intron (NM_021439, intron 2 of 2)	174695	NM_021439	58250	Mm.360747	NM_021439	ENSMUSG00000034612	Chst11	1110020P09Rik|C4ST|C4ST-1|C4ST1|C4s	carbohydrate sulfotransferase 11	protein-coding
common_peak2-31884-14-32--1.14517795900081-1.66700866096458	chr9	56089717	56090681	+	0	NA	intron (NM_172924, intron 4 of 6)	B4A|SINE|B4	-81322	NM_019793	56434	Mm.28484	NM_019793	ENSMUSG00000032324	Tspan3	1700055K04Rik|TM4-A|Tm4sf8	tetraspanin 3	protein-coding
common_peak2-21231-58-78--0.00783081328660629-0.302413108461692	chr11	65787459	65788345	+	0	NA	intron (NM_001099633, intron 43 of 68)	L2|LINE|L2	167156	NM_026107	52712	Mm.340052	NM_026107	ENSMUSG00000018347	Zkscan6	1700128E15Rik|D11Ertd714e|KOX11|Zfp535|Znf18	zinc finger with KRAB and SCAN domains 6	protein-coding
common_peak2-31968-16-13-0.310908720210457-0.417187467413082	chr9	67040351	67040990	+	0	NA	Intergenic	ID_B1|SINE|B4	43863	NR_029576	387185		NR_029576		Mir190a	Mir190|Mirn190|mir-190|mmu-mir-190|mmu-mir-190a	microRNA 190a	ncRNA
common_peak1-10736-20-26--0.266812717572275-0.373496418836697	chr14	65837351	65838036	+	0	NA	intron (NM_021458, intron 4 of 6)	intron (NM_021458, intron 4 of 6)	43607	NM_021458	14365	Mm.214687	NM_021458		Fzd3	AU020229|D930050A07Rik|Fz3	frizzled homolog 3 (Drosophila)	protein-coding
common_peak2-25379-105-126-0.332649223751001-1.18080919041723	chr18	84588603	84590428	+	0	NA	intron (NM_001033341, intron 4 of 8)	intron (NM_001033341, intron 4 of 8)	169381	NM_001033341	240476	Mm.329575	NM_001033341	ENSMUSG00000048410	Zfp407	6430585N13Rik|Gm333|Gm334|Gm948|ZNF407	zinc finger protein 407	protein-coding
common_peak2-26347-11-10-0.0492619656143161-0.31137425193576	chr2	35680950	35681440	+	0	NA	intron (NM_029774, intron 6 of 9)	intron (NM_029774, intron 6 of 9)	6485	NR_040618	77665	Mm.400558	NR_040618	ENSMUSG00000086449	9030204H09Rik	-	RIKEN cDNA 9030204H09 gene	ncRNA
common_peak2-19964-3-5--0.998945590680433-0.96108193396963	chr1	133046875	133047210	+	0	NA	Intergenic	B1F|SINE|Alu	-2742	NM_001136070	16865	Mm.276294	NM_010709	ENSMUSG00000026427	Eif2d	D1Ertd5e|Lgtn	eukaryotic translation initiation factor 2D	protein-coding
unique_peak1-2659-19-2-2.81772482594053-4.27364484827118	chr16	52418879	52419789	+	0	NA	intron (NM_009655, intron 1 of 15)	intron (NM_009655, intron 1 of 15)	33776	NM_009655	11658	Mm.288282	NM_009655	ENSMUSG00000022636	Alcam	AI853494|BEN|CD166|DM-GRASP|MuSC|SC1	activated leukocyte cell adhesion molecule	protein-coding
common_peak1-13411-24-11-1.20824740204656-1.9654245668484	chr19	53040072	53041081	+	0	NA	Intergenic	Lx9|LINE|L1	42905	NR_030678	100043450	Mm.145594	NR_030678		AA387883	-	expressed sequence AA387883	ncRNA
common_peak2-24837-15-10-0.552733131918359-0.604422558181019	chr17	74315968	74316433	+	0	NA	Intergenic	Lx4B|LINE|L1	-16664	NM_011723	22436	Mm.11223	NM_011723	ENSMUSG00000024066	Xdh	XO|Xor|Xox-1|Xox1	xanthine dehydrogenase	protein-coding
unique_peak2-35883-2-4--1.23938235115068-0.931118710592187	chr18	84089869	84090226	+	0	NA	Intergenic	Intergenic	165907	NM_001081300	110796	Mm.102136	NM_001081300	ENSMUSG00000046982	Tshz1	5730407I04Rik|D18Bwg1409e|Mtsh1|NY-CO-33|Sdccag33|Tsh1|mKIAA4206|teashirt1	teashirt zinc finger family member 1	protein-coding
common_peak1-8898-86-120-0.0567725567577586-0.332810792100067	chr11	49202428	49204472	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-40479	NM_147066	259069	Mm.377820	NM_147066	ENSMUSG00000046575	Olfr1389	MOR256-1	olfactory receptor 1389	protein-coding
unique_peak1-489-7-0-2.79909083029819-2.40823996531185	chr1	178328329	178328856	+	0	NA	Intergenic	Intergenic	-123149	NM_176916	319455	Mm.338001	NM_176916	ENSMUSG00000055214	Pld5	B230365F16Rik	phospholipase D family, member 5	protein-coding
common_peak1-13259-54-37-0.925158248186149-2.78521478104011	chr19	32757487	32759033	+	0	NA	intron (NM_026487, intron 8 of 9)	intron (NM_026487, intron 8 of 9)	28528	NM_026487	67979	Mm.27123	NM_026487	ENSMUSG00000013662	Atad1	4921525H23Rik|AW107648|Thorase	ATPase family, AAA domain containing 1	protein-coding
unique_peak1-49-6-0-2.5653981103803-2.10720996964787	chr1	23878097	23878546	+	0	NA	intron (NM_001290683, intron 4 of 9)	intron (NM_001290683, intron 4 of 9)	38254	NR_110972	98366	Mm.329963	NM_028534	ENSMUSG00000026155	Smap1	1700056O10Rik|4921514B13Rik|4921525H11Rik|AI462175	small ArfGAP 1	protein-coding
common_peak2-25316-67-90-0.0366168425842988-0.311709846559118	chr18	75367450	75369494	+	0	NA	intron (NM_027727, intron 14 of 16)	intron (NM_027727, intron 14 of 16)	88499	NR_045394	100503117	Mm.250517	NR_045393		2010010A06Rik	5033420E22Rik	RIKEN cDNA 2010010A06 gene	ncRNA
common_peak1-15564-16-13-0.310908720210457-0.417187467413082	chr4	126103845	126104604	+	0	NA	intron (NM_153402, intron 1 of 18)	B3|SINE|B2	2562	NM_153402	214150	Mm.440915	NM_153402		Ago3	AW048688|C130014L07Rik|Eif2c3	argonaute RISC catalytic subunit 3	protein-coding
common_peak2-22666-39-59--0.291129348689365-0.502380543067039	chr13	96924365	96925669	+	0	NA	Intergenic	Intergenic	-22485	NM_029210	75209	Mm.40436	NM_029210	ENSMUSG00000051111	Sv2c	4930527L09Rik|AI841971	synaptic vesicle glycoprotein 2c	protein-coding
common_peak2-22409-32-41--0.113225403559101-0.311888488969622	chr13	34344363	34345477	+	0	NA	intron (NM_001033167, intron 3 of 10)	B2_Mm2|SINE|B2	90087	NM_001110515	69666	Mm.24788	NM_001101430	ENSMUSG00000071451	Psmg4	PAC-4|mPAC4	proteasome (prosome, macropain) assembly chaperone 4	protein-coding
unique_peak1-6192-11-4-1.18676548936425-1.68134727924692	chr6	147772958	147773647	+	0	NA	Intergenic	Intergenic	134539	NR_033636	100039727	Mm.396220	NR_033636	ENSMUSG00000085077	1700049E15Rik	Gm15761|OTTMUSG00000026044	RIKEN cDNA 1700049E15 gene	ncRNA
common_peak2-25640-22-17-0.477359103645092-0.633951497070961	chr19	9836523	9836933	+	0	NA	Intergenic	Intergenic	137295	NM_016692	16319	Mm.29755	NM_016692	ENSMUSG00000024660	Incenp	2700067E22Rik|AU019509|C130081E20|C77457	inner centromere protein	protein-coding
unique_peak2-38856-5-11--1.28934283672701-1.477227296591	chr7	144684941	144685664	+	0	NA	Intergenic	Intergenic	55945	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
unique_peak1-3745-18-4-1.99099105634099-2.82951996911245	chr19	47515143	47515995	+	0	NA	intron (NM_001164717, intron 1 of 13)	intron (NM_001164717, intron 1 of 13)	23332	NM_001164717	14218	Mm.127560	NM_008018	ENSMUSG00000053617	Sh3pxd2a	2310014D11Rik|AA589508|AI256723|AI413738|C230050L11|EG329070|Fish|Gm5098|Sh3md1|TSK5|Tks5	SH3 and PX domains 2A	protein-coding
common_peak2-19884-34-73--0.827384838627684-2.13826684186156	chr1	95313161	95314528	+	0	NA	exon (NM_001301364, exon 19 of 28)	exon (NM_001301364, exon 19 of 28)	28434	NM_001301364	110611	Mm.30012	NM_133808	ENSMUSG00000034088	Hdlbp	1110005P14Rik|AA960365|AI118566|D1Ertd101e	high density lipoprotein (HDL) binding protein	protein-coding
common_peak2-24257-17-9-0.896368243317676-1.09394599973099	chr16	92685812	92686172	+	0	NA	intron (NM_001111022, intron 4 of 6)	intron (NM_001111022, intron 4 of 6)	11582	NM_001111023	12394	Mm.4081	NM_009821	ENSMUSG00000022952	Runx1	AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b	runt related transcription factor 1	protein-coding
common_peak1-9045-59-78-0.0215832526954749-0.306527540987196	chr11	65787466	65788486	+	0	NA	intron (NM_001099633, intron 43 of 68)	L2|LINE|L2	167230	NM_026107	52712	Mm.340052	NM_026107	ENSMUSG00000018347	Zkscan6	1700128E15Rik|D11Ertd714e|KOX11|Zfp535|Znf18	zinc finger with KRAB and SCAN domains 6	protein-coding
unique_peak2-37745-5-6--0.511735258063458-0.947717972411649	chr5	110653489	110653937	+	0	NA	Intergenic	Intergenic	-6310	NM_001253814	71782	Mm.288442	NM_027922	ENSMUSG00000029501	Ankle2	1110001J12Rik|AI661024|D5Ertd585e	ankyrin repeat and LEM domain containing 2	protein-coding
common_peak2-24084-16-6-1.31090872021046-1.49151883326344	chr16	31593722	31594056	+	0	NA	Intergenic	Intergenic	-69640	NM_001252435	13383	Mm.382	NM_007862	ENSMUSG00000022770	Dlg1	B130052P05Rik|Dlgh1|E-dlg/SAP97|SAP-97|SAP97|mKIAA4187	discs, large homolog 1 (Drosophila)	protein-coding
unique_peak2-37273-4-9--1.34538860874061-1.36011389749466	chr4	115265021	115265542	+	0	NA	Intergenic	L1Md_F|LINE|L1	-8262	NM_001100181	100040843	Mm.482683	NM_001100181	ENSMUSG00000063929	Cyp4a32	OTTMUSG00000008689	cytochrome P450, family 4, subfamily a, polypeptide 32	protein-coding
common_peak2-31646-14-34--1.23006685658732-1.94354392707378	chr8	124897815	124899041	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-2088	NM_001029994	76014	Mm.241489	NM_001029993	ENSMUSG00000017478	Zc3h18	1190001B23Rik|5830416A07Rik|Nhn1	zinc finger CCCH-type containing 18	protein-coding
unique_peak2-34760-0-4--3.16205902536157-1.10720996964787	chr15	57912228	57912563	+	0	NA	Intergenic	Intergenic	-4332	NM_009572	22770	Mm.244931	NM_009572	ENSMUSG00000022361	Zhx1	-	zinc fingers and homeoboxes 1	protein-coding
common_peak1-14788-22-30--0.30691220529947-0.399869693390336	chr3	89458917	89459853	+	0	NA	intron (NM_080466, intron 5 of 7)	intron (NM_080466, intron 5 of 7)	-59559	NM_001038587	56417	Mm.316628	NM_019655	ENSMUSG00000027951	Adar	AV242451|Adar1|Adar1p110|Adar1p150|mZaADAR	adenosine deaminase, RNA-specific	protein-coding
unique_peak2-32975-6-6--0.241956811677302-0.947717972411649	chr10	54075953	54076379	+	0	NA	Intergenic	Intergenic	280438	NR_038016	100502920	Mm.403982	NR_038016	ENSMUSG00000097069	Gm16998	-	predicted gene, 16998	ncRNA
common_peak1-19239-13-18--0.469455482805817-0.409888142029227	chr9	108516457	108517014	+	0	NA	intron (NM_011790, intron 7 of 15)	intron (NM_011790, intron 7 of 15)	-16804	NM_028944	74443	Mm.226534	NM_028944	ENSMUSG00000006675	P4htm	4933406E20Rik|AI853847|BB128974|Ph-4	prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)	protein-coding
common_peak1-7730-51-33-0.987460984352234-2.86200135898774	chr1	88474719	88476392	+	0	NA	intron (NM_008801, intron 1 of 4)	ORR1D1|LTR|MaLR	3521	NM_008801	18582	Mm.12925	NM_008801	ENSMUSG00000026239	Pde6d	AI841218|PrBP/delta	phosphodiesterase 6D, cGMP-specific, rod, delta	protein-coding
common_peak1-10622-92-138--0.0265889890207429-0.304200056528757	chr14	34501694	34503802	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	100292	NM_008978	19256	Mm.8019	NM_008978	ENSMUSG00000021940	Ptpn20	typ	protein tyrosine phosphatase, non-receptor type 20	protein-coding
common_peak1-16297-107-89-0.862193836343721-5.202228712389	chr5	113770888	113772495	+	0	NA	Intergenic	Intergenic	-5026	NR_106089	102466821		NR_106089		Mir7230	mmu-mir-7230	microRNA mir-7230	ncRNA
common_peak2-24558-28-36--0.156494245807488-0.329362479200675	chr17	28621723	28622713	+	0	NA	intron (NM_010220, intron 1 of 10)	intron (NM_010220, intron 1 of 10)	876	NM_010220	14229	Mm.276405	NM_010220	ENSMUSG00000024222	Fkbp5	D17Ertd592e|Dit1|FKBP-5|FKBP51	FK506 binding protein 5	protein-coding
unique_peak1-6189-7-0-2.79909083029819-2.40823996531185	chr6	147589943	147590384	+	0	NA	Intergenic	Intergenic	-48600	NR_033636	100039727	Mm.396220	NR_033636	ENSMUSG00000085077	1700049E15Rik	Gm15761|OTTMUSG00000026044	RIKEN cDNA 1700049E15 gene	ncRNA
common_peak2-24071-39-50--0.0566640950523416-0.303223439438773	chr16	30527594	30528549	+	0	NA	intron (NM_172614, intron 9 of 9)	intron (NM_172614, intron 9 of 9)	22593	NM_172614	224090	Mm.241459	NM_172614		Tmem44	1700007N03Rik|9330161C17Rik|B230220N21	transmembrane protein 44	protein-coding
common_peak1-14154-28-18-0.805031606377877-1.27334590136207	chr2	132686225	132687533	+	0	NA	intron (NM_025646, intron 3 of 6)	intron (NM_025646, intron 3 of 6)	13409	NM_025646	66586	Mm.357342	NM_025646	ENSMUSG00000027357	Crls1	0610009I22Rik|4930557M15Rik|5730490M08Rik	cardiolipin synthase 1	protein-coding
common_peak1-18573-14-7-0.899216160357645-0.947446088118041	chr8	105635884	105636405	+	0	NA	Intergenic	Intergenic	235290	NR_036588	69794	Mm.396139	NR_036588		1600027J07Rik	-	RIKEN cDNA 1600027J07 gene	ncRNA
common_peak2-25353-27-49--0.652310238879489-1.08158034290998	chr18	80206616	80207396	+	0	NA	Intergenic	RMER19B|LTR|ERVK	-36628	NM_053117	93737	Mm.24678	NM_053117	ENSMUSG00000056214	Pard6g	2410049N21Rik|Par6a	par-6 family cell polarity regulator gamma	protein-coding
common_peak2-22710-10-10--0.103016273628528-0.301029995663987	chr13	101767318	101767757	+	0	NA	Intergenic	Intergenic	-164155	NM_022885	69048	Mm.402215	NM_022885	ENSMUSG00000021629	Slc30a5	1810010K08Rik|AF233321|ZNT5|ZTL1|ZnT-5|Zntl1	solute carrier family 30 (zinc transporter), member 5	protein-coding
unique_peak2-36773-6-29--2.34149248522822-3.87314773301527	chr3	68542641	68543586	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	47767	NM_008351	16159	Mm.103783	NM_008351	ENSMUSG00000027776	Il12a	IL-12p35|Il-12a|Ll12a|p35	interleukin 12a	protein-coding
unique_peak2-36432-17-24--0.425559851569687-0.427564438475253	chr2	130905885	130907078	+	0	NA	intron (NM_011426, intron 6 of 20)	intron (NM_011426, intron 6 of 20)	6020	NM_011426	20612	Mm.1374	NM_011426	ENSMUSG00000027322	Siglec1	Cd169|Siglec-1|Sn	sialic acid binding Ig-like lectin 1, sialoadhesin	protein-coding
common_peak2-26926-8-8--0.164702583494742-1.00793137938329	chr2	163553771	163554283	+	0	NA	intron (NM_001272052, intron 9 of 11)	intron (NM_001272052, intron 9 of 11)	21948	NM_007398	11486	Mm.388	NM_007398	ENSMUSG00000017697	Ada	-	adenosine deaminase	protein-coding
common_peak1-7698-15-12-0.311725032414564-0.425539671739611	chr1	82832493	82833305	+	0	NA	Intergenic	Intergenic	-3159	NM_010472	15463	Mm.392569	NM_010472	ENSMUSG00000026159	Agfg1	AU045498|C130049H11Rik|C85612|D730048C23Rik|Hrb|RAB|Rip	ArfGAP with FG repeats 1	protein-coding
common_peak1-8659-9-15--0.81038659359578-0.630231561310125	chr10	128058360	128058789	+	0	NA	Intergenic	MTC|LTR|MaLR	4988	NM_013765	27370	Mm.261679	NM_013765	ENSMUSG00000025362	Rps26	-	ribosomal protein S26	protein-coding
common_peak2-21177-17-22--0.305265617851975-0.348739088570342	chr11	59839028	59839780	+	0	NA	intron (NM_001290012, intron 2 of 6)	intron (NM_001290012, intron 2 of 6)	11103	NM_008819	18618	Mm.2731	NM_008819	ENSMUSG00000000301	Pemt	PEAMT|PEMT2|Pempt|Pempt2	phosphatidylethanolamine N-methyltransferase	protein-coding
common_peak2-24856-17-11-0.633333837483882-0.769930178837768	chr17	78387721	78388251	+	0	NA	Intergenic	Intergenic	-211602	NM_015800	50766	Mm.311912	NM_015800	ENSMUSG00000024074	Crim1	AU015004	cysteine rich transmembrane BMP regulator 1 (chordin like)	protein-coding
common_peak1-9379-8-8--0.164702583494742-1.00793137938329	chr11	98457850	98458209	+	0	NA	Intergenic	AT_rich|Low_complexity|Low_complexity	-1576	NM_001195544	192852	Mm.342821	NM_001195544		Gm12	-	predicted gene 12	protein-coding
unique_peak1-2591-10-3-1.35641534500877-1.75805390616669	chr16	31590977	31591610	+	0	NA	Intergenic	Intergenic	-72236	NM_001252435	13383	Mm.382	NM_007862	ENSMUSG00000022770	Dlg1	B130052P05Rik|Dlgh1|E-dlg/SAP97|SAP-97|SAP97|mKIAA4187	discs, large homolog 1 (Drosophila)	protein-coding
common_peak2-27835-36-67--0.608141755082585-1.2455458718154	chr3	148986983	148989470	+	0	NA	Intergenic	Intergenic	50525	NR_040591	381482	Mm.393866	NR_040591		Gm1653	-	predicted gene 1653	ncRNA
common_peak1-15509-24-11-1.20824740204656-1.9654245668484	chr4	116671593	116672680	+	0	NA	intron (NM_175244, intron 9 of 20)	intron (NM_175244, intron 9 of 20)	4183	NM_175244	76608	Mm.251420	NM_175244	ENSMUSG00000046861	Hectd3	1700064K09Rik|AI467540|AW743312	HECT domain containing 3	protein-coding
common_peak2-22723-116-126-0.505444646737256-2.38119176888682	chr13	104816422	104818093	+	0	NA	intron (NM_029447, intron 12 of 12)	intron (NM_029447, intron 12 of 12)	82437	NM_029447	75805	Mm.127692	NM_029447	ENSMUSG00000021710	Nln	4930472G13Rik|C79345	neurolysin (metallopeptidase M3 family)	protein-coding
common_peak2-32329-155-250-0.0260569458626927-0.316479568542954	chrX	73965923	73967960	+	0	NA	Intergenic	L1VL1|LINE|L1	-118678	NM_001201395	74987	Mm.107996	NM_001201395	ENSMUSG00000079525	4930468A15Rik	-	RIKEN cDNA 4930468A15 gene	protein-coding
common_peak2-22406-20-36--0.721378581037757-1.04213512323541	chr13	34129695	34131026	+	0	NA	intron (NM_026512, intron 1 of 6)	intron (NM_026512, intron 1 of 6)	850	NM_026512	68021	Mm.140243	NM_026512	ENSMUSG00000038286	Bphl	2010012D11Rik|5730533B08Rik|AI115341	biphenyl hydrolase-like (serine hydrolase, breast epithelial mucin-associated antigen)	protein-coding
unique_peak2-37821-4-9--1.34538860874061-1.36011389749466	chr5	125441703	125442326	+	0	NA	Intergenic	URR1A|DNA|MER1_type	-41831	NM_028443	73121	Mm.296138	NM_028443	ENSMUSG00000037962	Fam101a	3110032G18Rik|cfm|cfm2	family with sequence similarity 101, member A	protein-coding
unique_peak1-491-10-4-1.03448725012141-1.5150158574804	chr1	179440339	179440856	+	0	NA	Intergenic	Intergenic	64645	NM_013915	30928	Mm.330700	NM_013915	ENSMUSG00000063659	Zbtb18	RP58|Zfp238|Znf238	zinc finger and BTB domain containing 18	protein-coding
common_peak2-23700-29-34--0.0169929363298555-0.304177167304369	chr15	88861419	88862881	+	0	NA	intron (NM_031260, intron 22 of 26)	(TTGG)n|Simple_repeat|Simple_repeat	-28006	NM_001002005	406218	Mm.483059	NM_001002005	ENSMUSG00000058441	Panx2	-	pannexin 2	protein-coding
common_peak1-17700-8-8--0.164702583494742-1.00793137938329	chr7	73588594	73589115	+	0	NA	Intergenic	Intergenic	-16491	NM_053080	56847	Mm.140988	NM_053080	ENSMUSG00000015134	Aldh1a3	ALDH6|RALDH3|V1	aldehyde dehydrogenase family 1, subfamily A3	protein-coding
common_peak2-20601-28-32-0.00856500046300912-0.30437085424443	chr10	79854574	79855237	+	0	NA	TTS (NM_013595)	TTS (NM_013595)	-4509	NM_198615	237400	Mm.268389	NM_198615	ENSMUSG00000048696	Mex3d	BC059858|Rkhd1	mex3 homolog D (C. elegans)	protein-coding
unique_peak1-6556-11-2-1.92373108353046-2.32232533660526	chr7	130640864	130641391	+	0	NA	intron (NM_001081329, intron 2 of 6)	intron (NM_001081329, intron 2 of 6)	2836	NM_001081329	210162	Mm.135397	NM_175435	ENSMUSG00000030757	Zkscan2	9430065N20Rik|AW493225|Zfp694	zinc finger with KRAB and SCAN domains 2	protein-coding
common_peak1-14364-11-10-0.0492619656143161-0.31137425193576	chr2	167413272	167413810	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	43964	NM_023230	66589	Mm.278783	NM_023230	ENSMUSG00000078923	Ube2v1	0610011J09Rik|AI256840|CROC-1|CROC1|D7Bwg1382e|UEV-1	ubiquitin-conjugating enzyme E2 variant 1	protein-coding
unique_peak1-6831-7-2-1.21412832957703-1.45399745587252	chr8	79489971	79490205	+	0	NA	intron (NM_001083906, intron 2 of 8)	intron (NM_001083906, intron 2 of 8)	63681	NM_001083906	110784	Mm.324393	NM_001083906	ENSMUSG00000031618	Nr3c2	MR|Mlr	nuclear receptor subfamily 3, group C, member 2	protein-coding
unique_peak1-3746-8-2-1.42025991722641-1.65811743852845	chr19	47516105	47516630	+	0	NA	intron (NM_001164717, intron 1 of 13)	MIRm|SINE|MIR	22534	NM_001164717	14218	Mm.127560	NM_008018	ENSMUSG00000053617	Sh3pxd2a	2310014D11Rik|AA589508|AI256723|AI413738|C230050L11|EG329070|Fish|Gm5098|Sh3md1|TSK5|Tks5	SH3 and PX domains 2A	protein-coding
unique_peak1-5860-20-9-1.16614668970383-1.52222891542741	chr6	84263255	84264196	+	0	NA	Intergenic	Intergenic	110107	NR_046063	100038556	Mm.387783	NR_046063		Gm10445	ENSMUSG00000072956	predicted gene 10445	ncRNA
common_peak2-26244-12-10-0.189344366450341-0.386243247519795	chr2	29627605	29628179	+	0	NA	Intergenic	Intergenic	10844	NM_001177392	433416	Mm.330112	NM_001034887	ENSMUSG00000075425	Gm13547	OTTMUSG00000012686	predicted gene 13547	protein-coding
unique_peak2-38059-41-64--0.321219108179794-0.571074946341596	chr6	47663494	47664766	+	0	NA	Intergenic	Intergenic	-28755	NR_002841	19799		NR_002841		Rn4.5s	-	4.5S RNA	rRNA
unique_peak2-35709-2-7--1.91745425626332-1.45399745587252	chr18	32138592	32138980	+	0	NA	intron (NM_032394, intron 25 of 46)	ORR1A2-int|LTR|MaLR	-29496	NM_001025381	574402	Mm.391108	NM_001025381	ENSMUSG00000052229	Gpr17	AI853548	G protein-coupled receptor 17	protein-coding
common_peak2-25461-21-22-0.0459273092092225-0.319918318021793	chr19	4231735	4232379	+	0	NA	5' UTR (NM_027196, exon 1 of 4)	5' UTR (NM_027196, exon 1 of 4)	158	NM_027196	69745	Mm.32518	NM_027196	ENSMUSG00000024854	Pold4	2410012M21Rik|AI463381|AW060307|Polds|p12	polymerase (DNA-directed), delta 4	protein-coding
common_peak2-26547-21-21-0.110057646628938-0.344491671143527	chr2	92751519	92752452	+	0	NA	Intergenic	Intergenic	-3273	NM_030725	80976	Mm.33490	NM_030725	ENSMUSG00000027220	Syt13	5730409J20Rik|AI549909|mKIAA1427	synaptotagmin XIII	protein-coding
common_peak2-23670-8-7-0.00522241794757061-1.00793137938329	chr15	85662472	85662938	+	0	NA	promoter-TSS (NM_001033337)	promoter-TSS (NM_001033337)	-29	NM_001033337	239570	Mm.151748	NM_001033337	ENSMUSG00000035944	Ttc38	9030019H09	tetratricopeptide repeat domain 38	protein-coding
unique_peak2-33514-8-14--0.901668177660948-0.660903317613906	chr11	75173194	75173695	+	0	NA	intron (NM_001102611, intron 2 of 10)	RLTR6-int|LTR|ERV1	11509	NM_001102611	319822	Mm.340377	NM_177009	ENSMUSG00000018809	Smyd4	G430029E23Rik	SET and MYND domain containing 4	protein-coding
unique_peak2-38974-0-5--3.42509343119537-1.32905871926422	chr8	35776863	35777175	+	0	NA	Intergenic	Intergenic	-73649	NR_040706	330734	Mm.149998	NR_040706		B930018H19Rik	B930018H19	RIKEN cDNA B930018H19 gene	ncRNA
unique_peak2-33314-14-49--1.74464002941708-4.4324081904224	chr11	6756762	6757993	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-137337	NR_046025	626419	Mm.390334	NR_046025	ENSMUSG00000086808	Gm11981	OTTMUSG00000005129	predicted gene 11981	ncRNA
unique_peak1-7188-14-4-1.57728806547028-2.4322161449009	chr9	63092426	63093109	+	0	NA	intron (NM_011840, intron 16 of 21)	intron (NM_011840, intron 16 of 21)	-95999	NM_001163758	207667	Mm.36349	NM_172446	ENSMUSG00000022245	Skor1	AV273001|C230094B15Rik|Corl1|Lbxcor1	SKI family transcriptional corepressor 1	protein-coding
common_peak2-23343-33-19-1.00940946763817-1.9602491241746	chr15	38932759	38933373	+	0	NA	intron (NM_172402, intron 3 of 6)	intron (NM_172402, intron 3 of 6)	11196	NM_172402	69906	Mm.17875	NM_172402	ENSMUSG00000022299	Slc25a32	2610043O12Rik|Mftc	solute carrier family 25, member 32	protein-coding
unique_peak2-33429-3-27--3.22133801201688-5.0964776204452	chr11	60584789	60585430	+	0	NA	intron (NM_009410, intron 1 of 18)	B4A|SINE|B4	5758	NM_009410	21975	Mm.477819	NM_009410	ENSMUSG00000002814	Top3a	-	topoisomerase (DNA) III alpha	protein-coding
unique_peak1-172-26-8-1.75797409071615-3.2467506969819	chr1	74092148	74093275	+	0	NA	intron (NM_001289895, intron 3 of 32)	intron (NM_001289895, intron 3 of 32)	78310	NM_027884	21961	Mm.309975	NM_027884	ENSMUSG00000055322	Tns1	1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns	tensin 1	protein-coding
common_peak1-14551-138-212-0.0609612044705514-0.351068350339208	chr3	34019110	34021209	+	0	NA	Intergenic	ID_B1|SINE|B4	-39883	NM_026332	67713	Mm.274266	NM_026332	ENSMUSG00000027679	Dnajc19	1810055D05Rik|AA959924|Tim14	DnaJ (Hsp40) homolog, subfamily C, member 19	protein-coding
unique_peak2-38872-8-10--0.454209200689727-1.078512453669	chr8	8273595	8274192	+	0	NA	Intergenic	Intergenic	386880	NM_010111	13642	Mm.209813	NM_010111	ENSMUSG00000001300	Efnb2	ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1	ephrin B2	protein-coding
common_peak1-11106-9-23--1.39534909431694-1.67711336403294	chr15	61983923	61984513	+	0	NA	intron (NR_003368, intron 3 of 8)	intron (NR_003368, intron 3 of 8)	66788	NR_003523	67552	Mm.484027	NM_026230		H2afy3	4933432H23Rik	H2A histone family, member Y3	pseudo
unique_peak1-1364-9-6-0.382258484346616-1.11707584880836	chr12	31591511	31592003	+	0	NA	intron (NM_021330, intron 1 of 5)	intron (NM_021330, intron 1 of 5)	4720	NM_021330	11431	Mm.359831	NM_021330	ENSMUSG00000044573	Acp1	4632432E04Rik|AI427468|Acp-1|LMW-PTP	acid phosphatase 1, soluble	protein-coding
unique_peak2-36880-3-6--1.22133801201688-1.08602067057793	chr3	94786611	94786944	+	0	NA	intron (NM_001293716, intron 1 of 9)	intron (NM_001293716, intron 1 of 9)	8124	NM_001293716	107650	Mm.217222	NM_175356	ENSMUSG00000038861	Pi4kb	ESTM41|PI4K-beta|PI4Kbeta|Pik4cb	phosphatidylinositol 4-kinase, catalytic, beta polypeptide	protein-coding
unique_peak1-3869-22-5-2.06232160436625-3.46164246247458	chr2	10130139	10130971	+	0	NA	intron (NM_172471, intron 7 of 13)	PB1D10|SINE|Alu	55385	NM_172471	209378	Mm.313876	NM_172471	ENSMUSG00000025780	Itih5	4631408O11Rik|5430408M01Rik|E130106B02	inter-alpha (globulin) inhibitor H5	protein-coding
unique_peak2-36282-3-8--1.58390809140159-1.39487600375387	chr2	68870496	68870927	+	0	NA	intron (NM_172856, intron 4 of 9)	intron (NM_172856, intron 4 of 9)	-103146	NM_181547	329416	Mm.90047	NM_181547	ENSMUSG00000034738	Nostrin	Daip2|mDaIP2	nitric oxide synthase trafficker	protein-coding
common_peak1-7744-38-9-2.24952456441117-6.66263495416101	chr1	90289222	90290520	+	0	NA	Intergenic	RMER1B|Other|Other	-13723	NM_029269	75396	Mm.173058	NM_029269	ENSMUSG00000026295	Spp2	0610038O04Rik|pp-24|spp24	secreted phosphoprotein 2	protein-coding
unique_peak2-37906-7-9--0.522837264589173-1.05908390183068	chr5	143180261	143180750	+	0	NA	intron (NM_146257, intron 1 of 10)	intron (NM_146257, intron 1 of 10)	2450	NM_146257	243328	Mm.125942	NM_146257	ENSMUSG00000050822	Slc29a4	ENT4|mPMAT	solute carrier family 29 (nucleoside transporters), member 4	protein-coding
common_peak2-28421-31-33-0.137775829562784-0.350690697593776	chr4	143412230	143413239	+	0	NA	Intergenic	Intergenic	-6738	NM_001005371	381569	Mm.332024	NM_001005371	ENSMUSG00000059218	Gm13084	OTTMUSG00000010328	predicted gene 13084	protein-coding
unique_peak2-35106-1-5--2.2120195109379-1.32905871926422	chr16	22439238	22439533	+	0	NA	intron (NM_023794, intron 1 of 12)	CpG	258	NM_023794	104156	Mm.155708	NM_023794	ENSMUSG00000013089	Etv5	1110005E01Rik|8430401F14Rik|ERM	ets variant 5	protein-coding
common_peak1-11689-38-55--0.235902262759073-0.404412720632912	chr16	30510560	30511645	+	0	NA	TTS (NM_172614)	TTS (NM_172614)	39562	NM_172614	224090	Mm.241459	NM_172614		Tmem44	1700007N03Rik|9330161C17Rik|B230220N21	transmembrane protein 44	protein-coding
common_peak1-16600-22-29--0.259606490521114-0.36542888694933	chr5	149606382	149607446	+	0	NA	Intergenic	MTD|LTR|MaLR	53498	NR_028285	70138	Mm.417834	NR_028285	ENSMUSG00000086494	2210417A02Rik	AV081004	RIKEN cDNA 2210417A02 gene	ncRNA
common_peak1-19183-14-8-0.729291158915332-0.771068449301682	chr9	99131988	99132524	+	0	NA	intron (NM_001244762, intron 4 of 4)	intron (NM_001244762, intron 4 of 4)	5402	NM_001244762	623459	Mm.260891	NM_001244762	ENSMUSG00000096316	Gm6432	EG623459	predicted gene 6432	protein-coding
common_peak2-25095-20-14-0.581184188982674-0.690311289528838	chr18	36493484	36494030	+	0	NA	Intergenic	PB1D9|SINE|Alu	-14521	NM_001081365	66060	Mm.272527	NM_001081365		Cystm1	0610010O12Rik	cysteine-rich transmembrane module containing 1	protein-coding
unique_peak2-35586-5-10--1.16381195464315-1.33892459842472	chr17	74717193	74717656	+	0	NA	intron (NM_024428, intron 1 of 4)	intron (NM_024428, intron 1 of 4)	-1651	NM_001146223	66310	Mm.28536	NM_024428	ENSMUSG00000024067	Dpy30	2810410M20Rik|C87842	dpy-30 homolog (C. elegans)	protein-coding
unique_peak1-866-9-4-0.867685311516858-1.36011389749466	chr11	22668751	22669311	+	0	NA	Intergenic	L1Md_F2|LINE|L1	90704	NM_016888	53625	Mm.395495	NM_016888	ENSMUSG00000051650	B3gnt2	AA408337|AA409404|AW260308|B3Galt6|B3gnt1|BGnT-1|BGnT-2|BGnT1|BGnT2|Beta3gnt	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2	protein-coding
common_peak2-27220-28-21-0.593527501184165-0.884951936461256	chr3	51333062	51333970	+	0	NA	intron (NM_080793, intron 6 of 7)	PB1D10|SINE|Alu	-30163	NR_033624	100039684	Mm.387178	NR_033624	ENSMUSG00000097885	5031434O11Rik	AI481280|Gm2370	RIKEN cDNA 5031434O11 gene	ncRNA
unique_peak1-4875-10-3-1.35641534500877-1.75805390616669	chr4	12906791	12907344	+	0	NA	intron (NM_173746, intron 4 of 4)	intron (NM_173746, intron 4 of 4)	73083	NM_001171801	208820	Mm.12057	NM_173746		Triqk	C130086A10|Gm11818|OTTMUSG00000004461	triple QxxK/R motif containing	protein-coding
common_peak2-22336-17-24--0.425559851569687-0.427564438475253	chr13	23571262	23571851	+	0	NA	intron (NM_001289614, intron 6 of 6)	(TAAA)n|Simple_repeat|Simple_repeat	9170	NM_001289615	238555	Mm.129668	NM_175938		Btn2a2	Btn2|D030063K05	butyrophilin, subfamily 2, member A2	protein-coding
unique_peak1-3007-9-3-1.18961340640422-1.57096726280955	chr17	84153127	84153577	+	0	NA	intron (NM_001171053, intron 5 of 13)	intron (NM_001171053, intron 5 of 13)	47849	NM_001171052	116871	Mm.277668	NM_054082	ENSMUSG00000055817	Mta3	1110002J22Rik|mKIAA1266	metastasis associated 3	protein-coding
common_peak2-20067-52-48-0.493550146150491-1.12396031894769	chr1	153125749	153127423	+	0	NA	Intergenic	Intergenic	-65042	NM_001039512	117198	Mm.33764	NM_028582	ENSMUSG00000023150	Ivns1abp	1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850	influenza virus NS1A binding protein	protein-coding
unique_peak1-2006-9-2-1.60465090568306-1.87199725847353	chr15	4033414	4033866	+	0	NA	intron (NM_024188, intron 7 of 16)	(CACTC)n|Simple_repeat|Simple_repeat	-56234	NR_028266	414066	Mm.394461	NR_028266		BC037032	-	cDNA Sequence BC037032	ncRNA
common_peak1-10727-11-10-0.0492619656143161-0.31137425193576	chr14	63543558	63544061	+	0	NA	intron (NM_175546, intron 3 of 11)	B3|SINE|B2	59430	NR_105860	102465311		NR_105860		Mir6541	mmu-mir-6541	microRNA mir-6541	ncRNA
unique_peak1-5613-8-2-1.42025991722641-1.65811743852845	chr6	116407918	116408413	+	0	NA	intron (NM_009662, intron 1 of 13)	intron (NM_009662, intron 1 of 13)	3031	NM_009662	11689	Mm.41072	NM_009662	ENSMUSG00000025701	Alox5	5-LO|5-LOX|5LO|5LX|AI850497|F730011J02	arachidonate 5-lipoxygenase	protein-coding
common_peak2-22822-40-57--0.199005312376474-0.373449689110125	chr14	18893001	18893982	+	0	NA	Intergenic	Intergenic	79333	NM_009380	21834	Mm.32563	NM_009380	ENSMUSG00000021779	Thrb	Nr1a2|T3R[b]|T3Rbeta|Thrb1|Thrb2|c-erbAbeta	thyroid hormone receptor beta	protein-coding
unique_peak1-6154-23-9-1.39983940962172-2.17218792383888	chr6	136531665	136532865	+	0	NA	intron (NM_019426, intron 8 of 14)	(TG)n|Simple_repeat|Simple_repeat	64893	NM_019426	54343	Mm.173271	NM_019426	ENSMUSG00000030213	Atf7ip	2610204M12Rik|AM|Mcaf1	activating transcription factor 7 interacting protein	protein-coding
common_peak1-8603-13-13--0.0288828914198356-0.309074325783021	chr10	111960610	111961358	+	0	NA	Intergenic	Intergenic	-202998	NR_040579	69355	Mm.84337	NR_040579		1700010J16Rik	-	RIKEN cDNA 1700010J16 gene	ncRNA
common_peak1-7916-24-45--0.730352053289296-1.16863888781394	chr1	138348254	138349384	+	0	NA	Intergenic	Intergenic	-15606	NM_001287179	381293	Mm.458468	NM_001081258	ENSMUSG00000041498	Kif14	D1Ertd367e|E130203M01	kinesin family member 14	protein-coding
common_peak2-28790-12-7-0.648775985087639-0.697979855752659	chr5	64325755	64326298	+	0	NA	intron (NM_145923, intron 3 of 6)	MLT1A1|LTR|MaLR	34110	NM_145923	100532	Mm.243632	NM_145923	ENSMUSG00000047881	Rell1	AA536743	RELT-like 1	protein-coding
common_peak1-15496-26-46--0.626689759519175-1.0379745517287	chr4	114986565	114987834	+	0	NA	intron (NM_177406, intron 4 of 11)	L1Md_A|LINE|L1	15548	NM_177406	277753	Mm.276106	NM_177406	ENSMUSG00000066071	Cyp4a12a	BC025936|Cyp4a12	cytochrome P450, family 4, subfamily a, polypeptide 12a	protein-coding
unique_peak1-2745-17-3-2.21829633820504-3.11807310444576	chr17	34963200	34964000	+	0	NA	intron (NM_019442, intron 4 of 6)	MuRRS4-int|LTR|ERV1	-3201	NM_011413	625018	Mm.439678	NM_011413		C4a	Slp	complement component 4A (Rodgers blood group)	protein-coding
common_peak1-10195-16-27--0.689091279789542-0.798885335210229	chr13	44939760	44940383	+	0	NA	intron (NM_021878, intron 3 of 18)	intron (NM_021878, intron 3 of 18)	113431	NM_001205043	16468	Mm.25059	NM_021878	ENSMUSG00000038518	Jarid2	Jmj|jumonji	jumonji, AT rich interactive domain 2	protein-coding
common_peak1-17019-11-9-0.186765489364251-0.344532117358383	chr6	91077069	91077627	+	0	NA	Intergenic	Intergenic	-10528	NM_018815	54563	Mm.28162	NM_018815	ENSMUSG00000030091	Nup210	9830001L10|AI836801|Pom210|gp190|gp210	nucleoporin 210	protein-coding
common_peak1-11871-14-39--1.42271193452972-2.70027529094734	chr16	93832087	93832973	+	0	NA	5' UTR (NM_001045529, exon 1 of 17)	5' UTR (NM_001045529, exon 1 of 17)	164	NM_001045529	338467	Mm.287329	NM_001045529	ENSMUSG00000039456	Morc3	1110051N18Rik|AI452146|BF318192|D16Jhu32e|NXP2|Zcwcc3	microrchidia 3	protein-coding
common_peak1-14264-28-24-0.409102930046738-0.610902792227729	chr2	155956081	155956886	+	0	NA	intron (NM_010911, intron 7 of 12)	B1_Mur2|SINE|Alu	-13406	NM_001164216	67067	Mm.371623	NM_025946	ENSMUSG00000067847	Romo1	2010100O12Rik|AI853864	reactive oxygen species modulator 1	protein-coding
common_peak2-30543-13-18--0.469455482805817-0.409888142029227	chr7	72096426	72097187	+	0	NA	intron (NM_183087, intron 2 of 9)	L1M3|LINE|L1	-78880	NM_023239	66647	Mm.19944	NM_023239		Ndnl2	5730494G16Rik|AI642138|BB044375|HCA4|Mageg1|mage-g1	necdin-like 2	protein-coding
common_peak1-15695-10-18--0.891512168434816-0.804350088532826	chr4	139380706	139381255	+	0	NA	intron (NM_011039, intron 4 of 8)	ID4_|SINE|ID	7903	NM_011039	18509	Mm.218760	NM_011039	ENSMUSG00000028736	Pax7	Pax-7	paired box 7	protein-coding
unique_peak2-36987-5-7--0.704380336005853-1.01466476204226	chr3	121171440	121171843	+	0	NA	intron (NM_145394, intron 12 of 14)	intron (NM_145394, intron 12 of 14)	42182	NM_028044	71994	Mm.275555	NM_028044	ENSMUSG00000053931	Cnn3	1600014M03Rik|C85854|Calpo3	calponin 3, acidic	protein-coding
unique_peak1-6115-16-3-2.11826364226806-2.65002542325363	chr6	128281834	128282630	+	0	NA	intron (NM_011657, intron 4 of 10)	B2_Mm2|SINE|B2	23637	NM_011657	22158	Mm.291783	NM_011657	ENSMUSG00000001521	Tulp3	2310022L06Rik|AI316887	tubby-like protein 3	protein-coding
common_peak1-12468-9-12--0.510826311736872-0.394412252720706	chr17	84106054	84106566	+	0	NA	intron (NM_001171053, intron 1 of 13)	intron (NM_001171053, intron 1 of 13)	807	NM_001171052	116871	Mm.277668	NM_054082	ENSMUSG00000055817	Mta3	1110002J22Rik|mKIAA1266	metastasis associated 3	protein-coding
common_peak2-24876-4-7--1.02346051385325-1.09384600808989	chr17	83216024	83216409	+	0	NA	Intergenic	Intergenic	261349	NR_045094	100503434	Mm.187281	NR_045094		Gm19689	-	predicted gene, 19689	ncRNA
common_peak1-8813-162-235-0.19177649112346-0.828195812835006	chr11	21238086	21240018	+	0	NA	intron (NM_139297, intron 3 of 9)	intron (NM_139297, intron 3 of 9)	5626	NR_035454	100316753		NR_035454		Mir1933	mmu-mir-1933	microRNA 1933	ncRNA
unique_peak1-6387-26-3-2.92789909215846-5.86906124235393	chr7	75654835	75656023	+	0	NA	Intergenic	Intergenic	93119	NR_046208	71244	Mm.410787	NR_046208		4933436H12Rik	-	RIKEN cDNA 4933436H12 gene	ncRNA
unique_peak1-511-12-6-0.841421063030034-1.58711810488664	chr1	183154540	183155054	+	0	NA	Intergenic	Intergenic	-12688	NM_145514	226757	Mm.289082	NM_145514	ENSMUSG00000038733	Wdr26	1600024A01Rik|AA693241|AI447817|AU044014|C77982|Gid7	WD repeat domain 26	protein-coding
common_peak1-14878-18-24--0.330937038546373-0.380101753845076	chr3	95819561	95820404	+	0	NA	intron (NM_013841, intron 14 of 14)	intron (NM_013841, intron 14 of 14)	-20220	NM_023320	67220	Mm.458147	NM_023320	ENSMUSG00000015745	Plekho1	2810052M02Rik|CKIP-1|Ckip1|JZA-20|Jza2	pleckstrin homology domain containing, family O member 1	protein-coding
common_peak1-17343-21-13-0.762134343208631-1.0220094258199	chr6	149192951	149193928	+	0	NA	Intergenic	Intergenic	-56205	NM_001113424	232566	Mm.209147	NM_001113424	ENSMUSG00000068250	Amn1	5830467E07Rik|A230083D09|C730024G19Rik	antagonist of mitotic exit network 1	protein-coding
common_peak2-20018-25-49--0.782006284429619-1.42714050806394	chr1	135728380	135729677	+	0	NA	Intergenic	CT-rich|Low_complexity|Low_complexity	74722	NM_054076	269120	Mm.59985	NM_054076	ENSMUSG00000010311	Optc	-	opticin	protein-coding
common_peak1-8154-6-7--0.434601889619698-0.97990265578305	chr1	192092151	192092658	+	0	NA	Intergenic	Intergenic	-97845	NM_008937	19130	Mm.132579	NM_008937	ENSMUSG00000010175	Prox1	A230003G05Rik	prospero homeobox 1	protein-coding
common_peak1-13838-20-9-1.16614668970383-1.52222891542741	chr2	59672825	59673555	+	0	NA	intron (NM_001290659, intron 20 of 25)	intron (NM_001290659, intron 20 of 25)	47473	NM_001159636	72137	Mm.288734	NM_028118	ENSMUSG00000026988	Wdsub1	1700048E19Rik|2610014F08Rik	WD repeat, SAM and U-box domain containing 1	protein-coding
unique_peak1-985-10-1-2.35641534500877-2.57096726280955	chr11	68223422	68223988	+	0	NA	Intergenic	Intergenic	-21922	NM_177320	320207	Mm.244960	NM_177320	ENSMUSG00000020901	Pik3r5	AV230647|F730038I15Rik	phosphoinositide-3-kinase, regulatory subunit 5, p101	protein-coding
common_peak1-15492-32-75--0.968835494223925-2.81241087741094	chr4	109656982	109658036	+	0	NA	Intergenic	Intergenic	6879	NM_172296	242620	Mm.32825	NM_172296	ENSMUSG00000047143	Dmrta2	Dmrt5	doublesex and mab-3 related transcription factor like family A2	protein-coding
common_peak2-22598-59-61-0.371167690485703-0.858683394889021	chr13	73750174	73752321	+	0	NA	intron (NM_146047, intron 9 of 16)	intron (NM_146047, intron 9 of 16)	9797	NM_146047	218335	Mm.30099	NM_146047	ENSMUSG00000021610	Clptm1l	C130052I12Rik|Crr9	CLPTM1-like	protein-coding
common_peak1-10179-12-13--0.158578936969966-0.301029995663979	chr13	40917266	40917759	+	0	NA	Intergenic	MuLV-int|LTR|ERV1	-37625	NM_023887	14538	Mm.314757	NM_008105	ENSMUSG00000021360	Gcnt2	5330430K10Rik|IGnT|IGnTA|IGnTB|IGnTC	glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	protein-coding
common_peak2-29046-24-28--0.0647710923598552-0.301029995663979	chr5	115272150	115272973	+	0	NA	exon (NM_181075, exon 2 of 2)	exon (NM_181075, exon 2 of 2)	916	NM_181075	330173	Mm.482205	NM_181075	ENSMUSG00000092486	2610524H06Rik	-	RIKEN cDNA 2610524H06 gene	protein-coding
unique_peak1-3943-8-1-2.00522241794757-2.05605744720049	chr2	29453992	29454485	+	0	NA	Intergenic	Intergenic	-21002	NM_054050	107746	Mm.298274	NM_054050	ENSMUSG00000039844	Rapgef1	4932418O06Rik|C3G|Grf2	Rap guanine nucleotide exchange factor (GEF) 1	protein-coding
unique_peak1-3904-10-3-1.35641534500877-1.75805390616669	chr2	24048316	24048877	+	0	NA	3' UTR (NM_153511, exon 5 of 5)	3' UTR (NM_153511, exon 5 of 5)	6600	NM_153511	215257	Mm.249379	NM_153511	ENSMUSG00000044103	Il1f9	Il36g	interleukin 1 family, member 9	protein-coding
common_peak2-31502-24-26-0.0383224006042484-0.317118655902073	chr8	107114330	107115127	+	0	NA	promoter-TSS (NM_001024606)	promoter-TSS (NM_001024606)	-640	NM_001024606	382051	Mm.290750	NM_001024606	ENSMUSG00000048371	Pdp2	4833426J09Rik|Gm1705|mKIAA1348	pyruvate dehyrogenase phosphatase catalytic subunit 2	protein-coding
unique_peak2-36896-4-8--1.19338551529556-1.21878474469819	chr3	95882655	95883128	+	0	NA	Intergenic	RSINE1|SINE|B4	-20513	NM_013841	22365	Mm.263185	NM_013841	ENSMUSG00000015747	Vps45	AI462172|AW554165|mVps45	vacuolar protein sorting 45 (yeast)	protein-coding
unique_peak1-4694-14-6-1.09186123830004-1.16633110333236	chr3	97298218	97298805	+	0	NA	Intergenic	Intergenic	-83409	NM_146275	258272	Mm.377406	NM_146275	ENSMUSG00000051392	Olfr1402	MOR217-1	olfactory receptor 1402	protein-coding
common_peak2-29858-8-9--0.316705676939792-1.03275496310833	chr6	99929975	99930370	+	0	NA	Intergenic	ID_B1|SINE|B4	-253786	NM_001170419	50501	Mm.87365	NM_015768	ENSMUSG00000030069	Prok2	Bv8|PK2|Prok1	prokineticin 2	protein-coding
common_peak1-12392-12-8-0.478850983645327-0.562038191119709	chr17	70741782	70742289	+	0	NA	Intergenic	Intergenic	-32097	NM_177639	224997	Mm.311840	NM_027712	ENSMUSG00000003279	Dlgap1	4933422O14Rik|9630002F18|AI845682|AI848168|BB075781|D17Bwg0511e|GKAP/SAPAP|GKPA/SAPAP|Gkap|Sapap1|mKIAA4162	discs, large (Drosophila) homolog-associated protein 1	protein-coding
unique_peak2-35509-2-6--1.72480917832092-1.26211192963361	chr17	47410278	47410511	+	0	NA	intron (NM_172622, intron 1 of 16)	intron (NM_172622, intron 1 of 16)	43215	NM_172622	224829	Mm.260989	NM_172622	ENSMUSG00000064043	Trerf1	9430096I18Rik|AI429294|B830015H24|RAPA|Trep-132|Trep132	transcriptional regulating factor 1	protein-coding
unique_peak2-39057-4-6--0.830815435910851-0.989110657569874	chr8	70880927	70881351	+	0	NA	3' UTR (NM_001252623, exon 11 of 11)	3' UTR (NM_001252623, exon 11 of 11)	-11219	NR_038189	73609	Mm.443247	NR_038181	ENSMUSG00000085197	1700125H03Rik	4930510D22Rik	RIKEN cDNA 1700125H03 gene	ncRNA
common_peak2-27486-7-7--0.200909169701811-0.97990265578305	chr3	94648812	94649252	+	0	NA	intron (NM_172683, intron 1 of 18)	B1_Mus1|SINE|Alu	7543	NM_172683	229584	Mm.274787	NM_172683	ENSMUSG00000038902	Pogz	9530006B08Rik	pogo transposable element with ZNF domain	protein-coding
unique_peak1-3591-6-2-0.980435609659146-1.26211192963361	chr19	32088644	32088956	+	0	NA	exon (NM_018830, exon 16 of 24)	exon (NM_018830, exon 16 of 24)	88830	NM_018830	54447	Mm.491229	NM_018830	ENSMUSG00000024887	Asah2	AI585898	N-acylsphingosine amidohydrolase 2	protein-coding
unique_peak1-1805-12-1-2.64877598508764-3.36932189928148	chr14	25491497	25492198	+	0	NA	Intergenic	Intergenic	181944	NM_011297	20088	Mm.16775	NM_011297	ENSMUSG00000025290	Rps24	-	ribosomal protein S24	protein-coding
unique_peak1-1495-14-8-0.729291158915332-0.771068449301682	chr13	63274744	63275498	+	0	NA	intron (NM_001289926, intron 7 of 15)	intron (NM_001289926, intron 7 of 15)	-66217	NR_110520	72061	Mm.188105	NM_028079	ENSMUSG00000021458	2010111I01Rik	2300006M17Rik|AP-O|Aopep	RIKEN cDNA 2010111I01 gene	protein-coding
common_peak2-28321-25-18-0.613922391901521-0.86528749982161	chr4	133659455	133660385	+	0	NA	intron (NR_045571, intron 1 of 13)	intron (NR_045571, intron 1 of 13)	1422	NM_026257	67586	Mm.282029	NM_026257	ENSMUSG00000012126	Ubxn11	4930506L07Rik|D4Bwg1540e|Soc|Soci|Ubxd5	UBX domain protein 11	protein-coding
common_peak2-26783-14-6-1.09186123830004-1.16633110333236	chr2	145219022	145219376	+	0	NA	intron (NM_053195, intron 2 of 16)	intron (NM_053195, intron 2 of 16)	-9943	NR_105748	102466620		NR_105748	miRBase:MI0021587	Mir6240	mmu-mir-6240	microRNA mir-6240	ncRNA
unique_peak1-5669-13-9-0.456543935750406-0.53895475198017	chr6	31082814	31083386	+	0	NA	intron (NR_110471, intron 3 of 3)	intron (NR_110471, intron 3 of 3)	-70007	NR_029532	387223		NR_029532	miRBase:MI0000143	Mir29b-1	Mirn29b|Mirn29b-1	microRNA 29b-1	ncRNA
common_peak1-11170-11-9-0.186765489364251-0.344532117358383	chr15	76264974	76265698	+	0	NA	intron (NM_175457, intron 29 of 43)	intron (NM_175457, intron 29 of 43)	1692	NR_105919	102465576		NR_105919		Mir6954	mmu-mir-6954	microRNA mir-6954	ncRNA
common_peak2-31126-26-38--0.357503126703786-0.505877949819268	chr8	34146236	34147134	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-86187	NM_001177589	100042715	Mm.291093	NM_001177589		Gm3985	-	predicted gene 3985	protein-coding
unique_peak2-38844-3-6--1.22133801201688-1.08602067057793	chr7	143502617	143503018	+	0	NA	intron (NR_102277, intron 3 of 3)	intron (NR_102277, intron 3 of 3)	38281	NR_040459	330664	Mm.127762	NR_040459		C230079O03Rik	C230079O03	RIKEN cDNA C230079O03 gene	ncRNA
unique_peak2-33158-3-5--0.998945590680433-0.96108193396963	chr10	89763782	89764179	+	0	NA	intron (NM_001128086, intron 10 of 24)	L1MA5|LINE|L1	-274492	NM_001177397	77531	Mm.440605	NM_181398	ENSMUSG00000058589	Anks1b	AIDA-1b|C030032C09Rik|E530015N03Rik|ENSMUSG00000078431|Gm10937|Gm1555	ankyrin repeat and sterile alpha motif domain containing 1B	protein-coding
unique_peak1-2376-27-7-1.99154595089524-4.07016573886257	chr15	95837272	95838118	+	0	NA	Intergenic	Intergenic	72288	NR_003627	402773	Mm.210567	NM_001033483		D030018L15Rik	-	nuclear receptor coactivator 2 pseudogene	pseudo
common_peak1-12768-111-109-0.636334077885508-3.30700315834361	chr18	60774008	60775570	+	0	NA	intron (NM_177340, intron 1 of 2)	intron (NM_177340, intron 1 of 2)	-5031	NM_001109975	104027	Mm.252321	NM_177340	ENSMUSG00000043079	Synpo	9030217H17Rik|9130229N11|9330140I15Rik|AW046661	synaptopodin	protein-coding
unique_peak2-37178-7-11--0.785871670422967-1.21681515183528	chr4	48279853	48280473	+	0	NA	intron (NM_029572, intron 1 of 11)	intron (NM_029572, intron 1 of 11)	12298	NM_029572	76299	Mm.317701	NM_029572	ENSMUSG00000028343	Erp44	1110001E24Rik|AI849526|AL033348|Txndc4	endoplasmic reticulum protein 44	protein-coding
common_peak2-30166-17-21--0.24113528043226-0.322753776620787	chr6	148212309	148212925	+	0	NA	intron (NM_198967, intron 12 of 19)	intron (NM_198967, intron 12 of 19)	-51721	NM_001286560	67456	Mm.59812	NM_026168	ENSMUSG00000030304	Ergic2	1200009B18Rik|4930572C01Rik|AA408438|Ptx1	ERGIC and golgi 2	protein-coding
unique_peak2-39340-2-10--2.37688587490062-2.09384600808989	chr9	6454943	6455362	+	0	NA	Intergenic	RMER10A|LTR|ERVL	-188605	NM_027942	71829	Mm.141452	NM_027942	ENSMUSG00000047619	Ddi1	1700011N24Rik	DDI1, DNA-damage inducible 1, homolog 1 (S. cerevisiae)	protein-coding
common_peak1-8614-22-10-1.18785248645011-1.74319850844462	chr10	116300921	116301860	+	0	NA	intron (NM_001033333, intron 1 of 24)	ORR1D2|LTR|MaLR	32545	NM_001033333	237558	Mm.336386	NM_001033333	ENSMUSG00000034057	Myrfl	Gm239	myelin regulatory factor-like	protein-coding
unique_peak2-38339-12-34--1.48050703185733-2.41238722831792	chr7	29179644	29180675	+	0	NA	intron (NM_019458, intron 3 of 13)	intron (NM_019458, intron 3 of 13)	2144	NM_019458	54624	Mm.7916	NM_019458	ENSMUSG00000003437	Paf1	5730511K23Rik|AA675045	Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)	protein-coding
unique_peak1-1218-11-4-1.18676548936425-1.68134727924692	chr11	106957327	106957942	+	0	NA	intron (NM_176850, intron 3 of 27)	ID_B1|SINE|B4	35602	NM_176850	207165	Mm.343986	NM_176850	ENSMUSG00000040481	Bptf	9430093H17Rik|Falz	bromodomain PHD finger transcription factor	protein-coding
common_peak1-13830-15-40--1.34538725406243-2.60849961611299	chr2	59160908	59161661	+	0	NA	intron (NM_175464, intron 11 of 20)	intron (NM_175464, intron 11 of 20)	63455	NR_040510	76676	Mm.110038	NR_040510	ENSMUSG00000087455	5330411J11Rik	-	RIKEN cDNA 5330411J11 gene	ncRNA
common_peak2-22285-27-49--0.652310238879489-1.08158034290998	chr13	13377739	13379319	+	0	NA	Intergenic	Intergenic	103480	NM_181852	107849	Mm.392548	NM_181852	ENSMUSG00000055360	Prl2c5	MRP-4|Mrpplf4|PLF-4	prolactin family 2, subfamily c, member 5	protein-coding
common_peak2-27441-29-24-0.468433890840386-0.748982406290548	chr3	89962799	89963997	+	0	NA	intron (NM_029937, intron 15 of 39)	ID_B1|SINE|B4	54171	NM_001190258	100043813	Mm.270283	NM_001190258	ENSMUSG00000050621	Rps27rt	ENSMUSG00000050621|Gm9846|Rps27l2	ribosomal protein S27, retrogene	protein-coding
common_peak2-25784-25-18-0.613922391901521-0.86528749982161	chr19	34552767	34553757	+	0	NA	Intergenic	Intergenic	-3637	NM_009890	12642	Mm.30824	NM_009890	ENSMUSG00000050370	Ch25h	AI462618|m25OH	cholesterol 25-hydroxylase	protein-coding
common_peak2-27166-18-40--1.04463285338973-1.77675427888235	chr3	31060824	31062029	+	0	NA	intron (NM_008770, intron 2 of 2)	L2c|LINE|L2	12584	NM_008770	18417	Mm.4425	NM_008770	ENSMUSG00000037625	Cldn11	Claudin-11|Claudin11|Osp|Otm	claudin 11	protein-coding
unique_peak1-1178-11-4-1.18676548936425-1.68134727924692	chr11	100395875	100396464	+	0	NA	Intergenic	ORR1C1-int|LTR|MaLR	-6855	NM_001199296	104112	Mm.282039	NM_134037	ENSMUSG00000020917	Acly	A730098H14Rik|AW538652	ATP citrate lyase	protein-coding
common_peak1-8445-37-45-0.0024311154288057-0.303416277109641	chr10	79668843	79670012	+	0	NA	Intergenic	B3A|SINE|B2	-19916	NM_023431	68114	Mm.273418	NM_023431	ENSMUSG00000020156	Mum1	2610019J09|9430059D04Rik|UBE-1C2	melanoma associated antigen (mutated) 1	protein-coding
unique_peak2-39483-4-6--0.830815435910851-0.989110657569874	chr9	58131142	58131676	+	0	NA	Intergenic	Intergenic	29610	NM_010729	16949	Mm.250492	NM_010729	ENSMUSG00000032334	Loxl1	Loxl	lysyl oxidase-like 1	protein-coding
common_peak1-16766-10-17--0.813509656433543-0.699649909729472	chr6	34877624	34878076	+	0	NA	exon (NM_009292, exon 2 of 9)	exon (NM_009292, exon 2 of 9)	6890	NM_009292	20899	Mm.5171	NM_009292	ENSMUSG00000029848	Stra8	-	stimulated by retinoic acid gene 8	protein-coding
common_peak2-22106-11-21--0.950738034385684-0.991115276827166	chr12	80319605	80320273	+	0	NA	intron (NM_030017, intron 6 of 6)	intron (NM_030017, intron 6 of 6)	10038	NM_030017	77974	Mm.274373	NM_030017	ENSMUSG00000021123	Rdh12	A930033N07Rik	retinol dehydrogenase 12	protein-coding
common_peak1-15514-11-10-0.0492619656143161-0.31137425193576	chr4	116824257	116824848	+	0	NA	Intergenic	Intergenic	2627	NR_028524	100217424		NR_028524		Snord38a	MBII-329	small nucleolar RNA, C/D box 38A	snoRNA
common_peak2-30340-20-21-0.0286431659538957-0.306080386793804	chr7	25658377	25659022	+	0	NA	intron (NM_027732, intron 3 of 8)	intron (NM_027732, intron 3 of 8)	3623	NM_027732	71241	Mm.66855	NM_027732	ENSMUSG00000011349	Dmrtc2	4933432E21Rik|Dmrt7	doublesex and mab-3 related transcription factor like family C2	protein-coding
common_peak1-14754-30-44--0.322177686837802-0.475038482441584	chr3	88137729	88139099	+	0	NA	promoter-TSS (NM_024246)	promoter-TSS (NM_024246)	-59	NM_024246	71913	Mm.34256	NM_024246	ENSMUSG00000001420	Tmem79	2310042N02Rik|2310074C17Rik	transmembrane protein 79	protein-coding
unique_peak2-32610-7-8--0.370834171144123-1.00793137938329	chr1	98029426	98029947	+	0	NA	Intergenic	Intergenic	-111351	NR_040467	73454	Mm.396229	NR_040467		1700063A18Rik	-	RIKEN cDNA 1700063A18 gene	ncRNA
common_peak1-19246-25-43--0.597581713292191-0.895935469411238	chr9	109073437	109074522	+	0	NA	Intergenic	L1Md_F|LINE|L1	-9443	NM_177069	320082	Mm.188028	NM_177069	ENSMUSG00000047237	Fbxw21	E330009P21Rik	F-box and WD-40 domain protein 21	protein-coding
common_peak1-16879-75-56-0.906176977578544-3.82493349571242	chr6	67266766	67268194	+	0	NA	intron (NM_008354, intron 8 of 15)	MamRep605|Unknown|Unknown	50507	NM_025814	66870	Mm.240490	NM_025814	ENSMUSG00000036371	Serbp1	1200009K13Rik|9330147J08Rik|AL022786|Pairbp1	serpine1 mRNA binding protein 1	protein-coding
common_peak1-12271-10-14--0.550475250599749-0.446472590016315	chr17	43053176	43053698	+	0	NA	Intergenic	Intergenic	-40064	NM_009847	12488	Mm.218637	NM_009847	ENSMUSG00000061665	Cd2ap	AL024079|C78928|METS-1|Mets1	CD2-associated protein	protein-coding
unique_peak1-4529-7-3-0.799090830298189-1.23214870625617	chr3	31038997	31039485	+	0	NA	Intergenic	RSINE1|SINE|B4	-9601	NM_008770	18417	Mm.4425	NM_008770	ENSMUSG00000037625	Cldn11	Claudin-11|Claudin11|Osp|Otm	claudin 11	protein-coding
unique_peak1-5483-10-3-1.35641534500877-1.75805390616669	chr5	130225603	130226112	+	0	NA	Intergenic	Intergenic	4454	NM_025450	66258	Mm.249809	NM_025450	ENSMUSG00000034211	Mrps17	1810006P02Rik|Mprs17	mitochondrial ribosomal protein S17	protein-coding
common_peak1-9201-50-95--0.544022184242204-1.44153550464095	chr11	80383198	80384076	+	0	NA	intron (NM_177390, intron 20 of 21)	Charlie13a|DNA|Charlie	93089	NM_009871	12569	Mm.142275	NM_009871	ENSMUSG00000048895	Cdk5r1	Cdk5r|D11Bwg0379e|p25|p35	cyclin-dependent kinase 5, regulatory subunit 1 (p35)	protein-coding
common_peak1-14164-22-18-0.399356591643819-0.549581527953406	chr2	137715723	137716630	+	0	NA	Intergenic	L1Md_T|LINE|L1	-366144	NM_001025431	228662	Mm.153405	NM_145534	ENSMUSG00000062098	Btbd3	mKIAA0952	BTB (POZ) domain containing 3	protein-coding
common_peak2-26405-18-46--1.24166970044929-2.58657013435545	chr2	59160823	59162071	+	0	NA	intron (NM_175464, intron 11 of 20)	intron (NM_175464, intron 11 of 20)	63292	NR_040510	76676	Mm.110038	NR_040510	ENSMUSG00000087455	5330411J11Rik	-	RIKEN cDNA 5330411J11 gene	ncRNA
common_peak2-21094-18-15-0.312919151228352-0.456667090758524	chr11	51688102	51688626	+	0	NA	Intergenic	Intergenic	-17381	NM_199299	76901	Mm.259996	NM_199299	ENSMUSG00000020387	Jade2	1200017K05Rik|AI480685|Phf15|mKIAA0239	jade family PHD finger 2	protein-coding
common_peak2-23524-19-19-0.0807592317743238-0.322753776620787	chr15	77305835	77306551	+	0	NA	Intergenic	RLTR25B|LTR|ERVK	-1284	NM_177744	245282	Mm.390820	NM_177744	ENSMUSG00000050982	Apol10a	9030421J09Rik	apolipoprotein L 10A	protein-coding
common_peak1-16803-59-113--0.507526013292163-1.53232159329387	chr6	47594028	47595280	+	0	NA	Intergenic	Intergenic	10439	NR_002841	19799		NR_002841		Rn4.5s	-	4.5S RNA	rRNA
common_peak2-27283-14-18--0.348711353085941-0.360333814299795	chr3	57650990	57651712	+	0	NA	exon (NM_019410, exon 1 of 3)	exon (NM_019410, exon 1 of 3)	328	NM_019410	18645	Mm.271744	NM_019410	ENSMUSG00000027805	Pfn2	Pfn	profilin 2	protein-coding
common_peak2-25618-9-15--0.81038659359578-0.630231561310125	chr19	8992407	8993080	+	0	NA	Intergenic	Intergenic	-2140	NM_024256	72727	Mm.259	NM_024256	ENSMUSG00000071649	B3gat3	2810405M13Rik	beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)	protein-coding
unique_peak1-3723-74-9-3.39395848209125-20.9443554362974	chr19	46453876	46456937	+	0	NA	intron (NM_016860, intron 6 of 10)	intron (NM_016860, intron 6 of 10)	14819	NM_016860	54130	Mm.3118	NM_016860	ENSMUSG00000025228	Actr1a	Arp1|alpha-Arp1	ARP1 actin-related protein 1A, centractin alpha	protein-coding
unique_peak1-4111-7-1-1.79909083029819-1.80617997398389	chr2	79606910	79607500	+	0	NA	intron (NM_001290743, intron 4 of 4)	RLTR10|LTR|ERVK	59268	NM_001290743	75276	Mm.257373	NM_172420	ENSMUSG00000034683	Ppp1r1c	4930565M23Rik|4930579P15Rik	protein phosphatase 1, regulatory (inhibitor) subunit 1C	protein-coding
unique_peak1-4281-9-1-2.18961340640422-2.31132995230379	chr2	138273476	138273992	+	0	NA	Intergenic	MLT1G|LTR|MaLR	169505	NM_145534	228662	Mm.153405	NM_145534	ENSMUSG00000062098	Btbd3	mKIAA0952	BTB (POZ) domain containing 3	protein-coding
unique_peak2-32924-2-13--2.72480917832092-2.79529063155376	chr10	24879059	24879648	+	0	NA	Intergenic	Lx8|LINE|L1	139616	NM_018747	432442	Mm.485937	NM_018747	ENSMUSG00000039166	Akap7	6430401D08|AI662165|AKAP15|Akap18|BB170514	A kinase (PRKA) anchor protein 7	protein-coding
unique_peak1-6315-16-4-1.7963355473807-2.18192634393779	chr7	44685952	44686772	+	0	NA	Intergenic	Intergenic	1833542	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak1-13988-11-5-0.923731083530457-1.477227296591	chr2	103282283	103282807	+	0	NA	intron (NM_010125, intron 3 of 6)	intron (NM_010125, intron 3 of 6)	18320	NM_010125	13711	Mm.20888	NM_010125	ENSMUSG00000027186	Elf5	ESE-2|ESE-5|ESE-5.	E74-like factor 5	protein-coding
unique_peak2-36460-0-6--3.64748585253182-1.56314192529759	chr2	142250420	142250770	+	0	NA	Intergenic	L1MB7|LINE|L1	476605	NM_001081133	16558	Mm.251934	NM_001081133	ENSMUSG00000038844	Kif16b	8430434E15Rik|AA623607|AI789011|C80253|C80902|mKIAA1590	kinesin family member 16B	protein-coding
common_peak1-13705-9-14--0.717277189204299-0.53895475198017	chr2	30472892	30473272	+	0	NA	Intergenic	B1F|SINE|Alu	22518	NM_030137	78617	Mm.40413	NM_030137	ENSMUSG00000047363	Cstad	9530039B02Rik	CSA-conditional, T cell activation-dependent protein	protein-coding
unique_peak1-4678-11-3-1.50869358425161-1.95434855131066	chr3	94918074	94918810	+	0	NA	intron (NM_009336, intron 1 of 5)	intron (NM_009336, intron 1 of 5)	3478	NM_009336	21427	Mm.133919	NM_009336	ENSMUSG00000008958	Vps72	Tcfl1|YL-1	vacuolar protein sorting 72 (yeast)	protein-coding
unique_peak1-7146-10-1-2.35641534500877-2.57096726280955	chr9	57425229	57425710	+	0	NA	exon (NM_022813, exon 3 of 9)	exon (NM_022813, exon 3 of 9)	-11790	NM_027895	71742	Mm.155877	NM_027895	ENSMUSG00000032308	Ulk3	1200015E14Rik	unc-51-like kinase 3	protein-coding
common_peak1-11269-207-397--0.135552954426142-0.651622517918921	chr15	81584644	81587025	+	0	NA	intron (NM_001081016, intron 1 of 22)	intron (NM_001081016, intron 1 of 22)	10556	NM_001081016	20286	Mm.432075	NM_001081016	ENSMUSG00000022390	Zc3h7b	Gm627|Scrg3|Zc2h7b|mKIAA1031	zinc finger CCCH type containing 7B	protein-coding
common_peak1-17060-20-14-0.581184188982674-0.690311289528838	chr6	99095791	99096833	+	0	NA	intron (NM_053202, intron 4 of 18)	intron (NM_053202, intron 4 of 18)	-118020	NM_001197322	108655	Mm.234965	NM_053202	ENSMUSG00000030067	Foxp1	3110052D19Rik|4932443N09Rik|AI461938|AW494214	forkhead box P1	protein-coding
unique_peak1-5915-8-2-1.42025991722641-1.65811743852845	chr6	88934362	88934904	+	0	NA	Intergenic	Intergenic	82388	NM_011906	24100	Mm.284480	NM_011906	ENSMUSG00000002871	Tpra1	40kDa|Gpr175|Tpra40	transmembrane protein, adipocyte asscociated 1	protein-coding
unique_peak2-37368-5-13--1.51173525806346-1.78669045979184	chr4	137286832	137287549	+	0	NA	Intergenic	Intergenic	35200	NM_001287172	11647	Mm.288186	NM_007431	ENSMUSG00000028766	Alpl	APTNAP|Akp-2|Akp2|TNAP|TNSALP	alkaline phosphatase, liver/bone/kidney	protein-coding
common_peak1-12655-42-46-0.187740476189546-0.440152849854807	chr18	36348465	36349597	+	0	NA	intron (NM_001167891, intron 1 of 9)	intron (NM_001167891, intron 1 of 9)	7783	NM_001167891	100042150	Mm.380390	NM_001167891	ENSMUSG00000060275	Nrg2	Don1|NTAK	neuregulin 2	protein-coding
common_peak2-27330-49-111--0.80107109903242-3.07598969704689	chr3	69004616	69006968	+	0	NA	Intergenic	ORR1A2|LTR|MaLR	-20549	NM_027843	71619	Mm.98122	NM_027843	ENSMUSG00000098207	Arl14	9130014L17Rik|Arf7	ADP-ribosylation factor-like 14	protein-coding
common_peak1-7692-15-8-0.842239749113344-0.891319708951327	chr1	82795049	82795746	+	0	NA	Intergenic	Intergenic	-30366	NM_025453	66261	Mm.46325	NM_025453	ENSMUSG00000026149	Tm4sf20	1810018L02Rik	transmembrane 4 L six family member 20	protein-coding
unique_peak1-1082-9-0-3.18961340640422-3.01029995663981	chr11	86839346	86839866	+	0	NA	Intergenic	B1_Mur3|SINE|Alu	-32342	NM_001005341	77864	Mm.191894	NM_001005341	ENSMUSG00000018427	Ypel2	6430570G24|E130113K08Rik	yippee-like 2 (Drosophila)	protein-coding
unique_peak1-6364-10-2-1.77145284428761-2.09384600808989	chr7	66570374	66570953	+	0	NA	intron (NR_015479, intron 2 of 2)	CT-rich|Low_complexity|Low_complexity	8856	NR_015479	330544	Mm.9002	NR_015479		C230091D08Rik	-	RIKEN cDNA C230091D08 gene	ncRNA
unique_peak2-38184-2-6--1.72480917832092-1.26211192963361	chr6	94699529	94699883	+	0	NA	Intergenic	Intergenic	-49567	NM_008377	16206	Mm.245210	NM_008377	ENSMUSG00000030029	Lrig1	D6Bwg0781e|Img|LIG-1	leucine-rich repeats and immunoglobulin-like domains 1	protein-coding
unique_peak1-4733-23-7-1.72176750450908-2.82905316394614	chr3	107705398	107706558	+	0	NA	Intergenic	B4A|SINE|B4	-6847	NR_015459	329735	Mm.270500	NM_177858	ENSMUSG00000086968	4933431E20Rik	-	RIKEN cDNA 4933431E20 gene	ncRNA
unique_peak1-5525-14-4-1.57728806547028-2.4322161449009	chr5	139314676	139315488	+	0	NA	Intergenic	Intergenic	19048	NM_001195128	384244	Mm.485002	NM_001195128	ENSMUSG00000094504	Gm5294	EG384244	predicted gene 5294	protein-coding
unique_peak2-33526-3-8--1.58390809140159-1.39487600375387	chr11	76477569	76478009	+	0	NA	Intergenic	Intergenic	-8183	NM_177182	320522	Mm.131585	NM_177182	ENSMUSG00000044243	Bhlha9	A830053O21Rik	basic helix-loop-helix family, member a9	protein-coding
common_peak1-14913-9-11--0.395349094316936-0.344532117358383	chr3	98023952	98024473	+	0	NA	Intergenic	Intergenic	-1867	NM_026328	67709	Mm.46306	NM_026328	ENSMUSG00000027876	Reg4	2010002L15Rik|GISP|RELP	regenerating islet-derived family, member 4	protein-coding
common_peak1-19086-14-10-0.439784541720347-0.519648556297791	chr9	70862816	70863439	+	0	NA	Intergenic	Intergenic	-80512	NM_008280	15450	Mm.390187	NM_008280	ENSMUSG00000032207	Lipc	AI256194|HL|Hpl	lipase, hepatic	protein-coding
unique_peak1-2805-8-6-0.197867495889966-1.03789460276074	chr17	22165341	22165848	+	0	NA	Intergenic	Intergenic	66068	NM_001025373	74670	Mm.26540	NM_001025373	ENSMUSG00000053347	Zfp943	4930432O21Rik	zinc finger prtoein 943	protein-coding
common_peak1-17839-63-84-0.0289216549328879-0.312459384164289	chr7	110614002	110615657	+	0	NA	Intergenic	Intergenic	-3726	NM_146756	258751	Mm.377673	NM_146756	ENSMUSG00000073948	Olfr608	MOR26-3	olfactory receptor 608	protein-coding
unique_peak1-1482-10-2-1.77145284428761-2.09384600808989	chr12	116267984	116268449	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-516311	NR_106063	102465664		NR_106063	miRBase:MI0022945	Mir7094-2	mmu-mir-7094-2	microRNA mir-7094-2	ncRNA
common_peak2-30365-54-88--0.302647669336664-0.649046969219241	chr7	28380930	28382301	+	0	NA	intron (NM_001110208, intron 1 of 13)	intron (NM_001110208, intron 1 of 13)	5036	NM_001110208	11652	Mm.177194	NM_007434	ENSMUSG00000004056	Akt2	2410016A19Rik|AW554154|PKB|PKBbeta	thymoma viral proto-oncogene 2	protein-coding
unique_peak2-33389-6-7--0.434601889619698-0.97990265578305	chr11	50174879	50175314	+	0	NA	Intergenic	RLTR20A|LTR|ERVK	-3715	NR_030529	100049547		NR_030529	miRBase:MI0005203	Mir804	Mirn804|mmu-mir-804	microRNA 804	ncRNA
common_peak2-23144-11-9-0.186765489364251-0.344532117358383	chr14	105893608	105894047	+	0	NA	Intergenic	Intergenic	-4178	NR_045921	74864	Mm.159344	NR_045921	ENSMUSG00000022116	4930449E01Rik	-	RIKEN cDNA 4930449E01 gene	ncRNA
common_peak2-30754-12-24--0.995080204687086-1.0220094258199	chr7	120677089	120677919	+	0	NA	intron (NM_001285831, intron 2 of 12)	intron (NM_001285831, intron 2 of 12)	20156	NM_027379	67420	Mm.206919	NM_026143	ENSMUSG00000030759	Far1	2600011M19Rik|2900034E22Rik|3732409C05Rik|AI850429|Mlstd2	fatty acyl CoA reductase 1	protein-coding
common_peak2-25663-109-88-0.910426250920803-5.70405871018196	chr19	10561011	10562877	+	0	NA	Intergenic	Intergenic	-4557	NM_133689	67752	Mm.25939	NM_133689	ENSMUSG00000035179	Ppp1r32	4930579J09Rik|AU015816|IIIG9|IIIG9L|IIIG9S	protein phosphatase 1, regulatory subunit 32	protein-coding
unique_peak1-5444-18-5-1.7279566505072-2.39372960542229	chr5	117361631	117362434	+	0	NA	Intergenic	Intergenic	203970	NM_001122666	71954	Mm.34456	NM_178622	ENSMUSG00000066900	Suds3	2400003N08Rik|2410008L21Rik|AU067672|mSds3	suppressor of defective silencing 3 homolog (S. cerevisiae)	protein-coding
unique_peak1-7088-12-2-2.06381348436648-2.79529063155376	chr9	31936289	31936737	+	0	NA	intron (NM_001195632, intron 1 of 21)	intron (NM_001195632, intron 1 of 21)	12792	NM_001195632	330914	Mm.46683	NM_177379	ENSMUSG00000041444	Arhgap32	3426406O18Rik|Gc-gap|Grit|Px-rics|Rics|mKIAA0712|p200Rhogap|p250Gap	Rho GTPase activating protein 32	protein-coding
common_peak1-13889-17-25--0.482143379936054-0.479250674391597	chr2	75832114	75832843	+	0	NA	intron (NM_001081033, intron 19 of 19)	intron (NM_001081033, intron 19 of 19)	-12454	NM_030188	78802	Mm.282339	NM_030188	ENSMUSG00000075271	Ttc30a1	4930506L13Rik	tetratricopeptide repeat domain 30A1	protein-coding
common_peak1-18830-56-70-0.085848705934561-0.338476598245404	chr9	13748184	13750051	+	0	NA	Intergenic	RLTR14|LTR|ERV1	116946	NM_176836	72826	Mm.246174	NM_176836	ENSMUSG00000037808	Fam76b	2810485I05Rik|C78303	family with sequence similarity 76, member B	protein-coding
common_peak1-9619-7-13--1.00826409175941-0.697979855752659	chr11	121228895	121229367	+	0	NA	intron (NM_139147, intron 1 of 5)	intron (NM_139147, intron 1 of 5)	-13370	NM_025793	66840	Mm.103986	NM_025793	ENSMUSG00000025173	Wdr45b	0610008N23Rik|AA408735|D16Bwg0193e|WIPI-3|Wdr45l	WD repeat domain 45B	protein-coding
common_peak1-7965-52-74--0.120558700230181-0.339000539072378	chr1	156035364	156036724	+	0	NA	Intergenic	Intergenic	-12273	NM_001204908	100503355	Mm.484410	NM_001204908	ENSMUSG00000066797	Zfp648	ENSMUSG00000066797|Gm10178|Gm203	zinc finger protein 648	protein-coding
common_peak2-24037-15-15-0.0121647505556561-0.30803596071496	chr16	24434339	24434956	+	0	NA	intron (NM_178665, intron 1 of 12)	intron (NM_178665, intron 1 of 12)	-13530	NM_001145952	210126	Mm.209385	NM_178665	ENSMUSG00000033306	Lpp	9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16	LIM domain containing preferred translocation partner in lipoma	protein-coding
common_peak2-28636-14-7-0.899216160357645-0.947446088118041	chr5	29387638	29387971	+	0	NA	Intergenic	L1Md_A|LINE|L1	-134729	NM_021470	56874	Mm.87352	NM_021470	ENSMUSG00000029130	Rnf32	1700009J01Rik|2700025B22Rik|4930542N22Rik|Lmbr2	ring finger protein 32	protein-coding
common_peak2-22902-7-6--0.00826409175941478-0.97990265578305	chr14	34309767	34310178	+	0	NA	Intergenic	Intergenic	-49628	NM_016700	26419	Mm.21495	NM_016700	ENSMUSG00000021936	Mapk8	AI849689|JNK|JNK1|Prkm8|SAPK1	mitogen-activated protein kinase 8	protein-coding
unique_peak2-39524-3-6--1.22133801201688-1.08602067057793	chr9	65579753	65580002	+	0	NA	intron (NM_172536, intron 2 of 9)	intron (NM_172536, intron 2 of 9)	55522	NM_001301307	18247	Mm.116749	NM_010952	ENSMUSG00000040652	Oaz2	AZ-2|AZ2|Oaz2-ps|Sez15	ornithine decarboxylase antizyme 2	protein-coding
common_peak1-16206-78-113--0.0260689200042066-0.301995097689947	chr5	93266895	93268930	+	0	NA	intron (NM_001077595, intron 1 of 9)	intron (NM_001077595, intron 1 of 9)	29504	NM_001077595	27428	Mm.46014	NM_015756	ENSMUSG00000029381	Shroom3	AL022960|D5Ertd287e|Shrm|Shrm3	shroom family member 3	protein-coding
unique_peak1-2781-8-2-1.42025991722641-1.65811743852845	chr17	10697363	10697835	+	0	NA	intron (NM_027032, intron 4 of 4)	Lx8|LINE|L1	48517	NR_077238	319750	Mm.383485	NR_077237	ENSMUSG00000089633	A230009B12Rik	-	RIKEN cDNA A230009B12 gene	ncRNA
unique_peak2-35797-8-15--0.994777582052429-0.771068449301683	chr18	59174620	59175399	+	0	NA	intron (NM_175506, intron 18 of 22)	L2|LINE|L2	-47026	NR_033764	225583	Mm.209711	NM_173759	ENSMUSG00000050875	A730017C20Rik	-	RIKEN cDNA A730017C20 gene	protein-coding
common_peak1-17988-21-54--1.21187044825842-2.8723234791159	chr7	137437360	137438395	+	0	NA	Intergenic	Intergenic	-27555	NM_201601	14183	Mm.16340	NM_010207	ENSMUSG00000030849	Fgfr2	AU043015|AW556123|Bek|Fgfr-2|Fgfr-7|Fgfr7|KGFR|KGFRTr|svs	fibroblast growth factor receptor 2	protein-coding
unique_peak1-6033-9-4-0.867685311516858-1.36011389749466	chr6	114404003	114404486	+	0	NA	intron (NM_001252643, intron 2 of 2)	intron (NM_001252643, intron 2 of 2)	50584	NM_001252643	15465	Mm.333327	NM_008285	ENSMUSG00000053004	Hrh1	Bphs|H1R|HH1R|Hir	histamine receptor H1	protein-coding
common_peak1-7853-12-10-0.189344366450341-0.386243247519795	chr1	132391237	132391848	+	0	NA	Intergenic	L1Md_T|LINE|L1	-32225	NM_010016	13136	Mm.101591	NM_010016	ENSMUSG00000026399	Cd55	Daf|Daf-GPI|Daf1|GPI-DAF	CD55 antigen	protein-coding
unique_peak1-6496-13-1-2.77847203063777-3.64038867156802	chr7	113458147	113458767	+	0	NA	Intergenic	L1VL1|LINE|L1	9585	NR_030720	668128	Mm.484022	NR_030720		Gm8989	EG668128|Gm21911	very large inducible GTPase 1 pseudogene	pseudo
unique_peak2-37783-1-9--2.94898510510411-2.31132995230379	chr5	117874873	117875435	+	0	NA	intron (NM_001114545, intron 1 of 19)	intron (NM_001114545, intron 1 of 19)	11143	NM_001114545	333050	Mm.437947	NM_001034873	ENSMUSG00000061578	Ksr2	-	kinase suppressor of ras 2	protein-coding
common_peak2-20870-13-35--1.39145297080454-2.32006591355687	chr11	100286415	100287253	+	0	NA	TTS (NM_010221)	TTS (NM_010221)	9826	NM_001163481	14230	Mm.3894	NM_010221	ENSMUSG00000001555	Fkbp10	AI325255|FKBP-10|FKBP-65|FKBP65|Fkbp-rs1|Fkbp1-rs|Fkbp6|Fkbprp	FK506 binding protein 10	protein-coding
common_peak2-24792-12-8-0.478850983645327-0.562038191119709	chr17	65702064	65702540	+	0	NA	intron (NM_001289485, intron 14 of 15)	L1Md_F3|LINE|L1	187820	NM_001008973	381107	Mm.141275	NM_001008973	ENSMUSG00000045036	Tmem232	E130009J12Rik|Gm940|Tes13-L|Tes13-S	transmembrane protein 232	protein-coding
common_peak1-15140-24-17-0.623284901325404-0.890873221665474	chr3	144668626	144669698	+	0	NA	intron (NM_017474, intron 12 of 13)	intron (NM_017474, intron 12 of 13)	26578	NM_017474	23844	Mm.33483	NM_017474	ENSMUSG00000028255	Clca3	Clca1|Clca2|gob-5|gob5	chloride channel calcium activated 3	protein-coding
common_peak2-21619-40-51--0.0414640353899935-0.301029995663982	chr11	100849824	100850952	+	0	NA	Intergenic	B3A|SINE|B2	-18457	NM_008986	19285	Mm.21864	NM_008986	ENSMUSG00000004044	Ptrf	2310075E07Rik|AW546441|Cav-p60|Cavin	polymerase I and transcript release factor	protein-coding
unique_peak2-36821-9-14--0.717277189204299-0.53895475198017	chr3	88144940	88145503	+	0	NA	intron (NM_178246, intron 1 of 21)	intron (NM_178246, intron 1 of 21)	5039	NM_178246	229512	Mm.439830	NM_173188	ENSMUSG00000001415	Smg5	BC024683|mKIAA1089	Smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans)	protein-coding
unique_peak2-33198-6-12--1.13504160776079-1.45089835786865	chr10	111298453	111299032	+	0	NA	intron (NR_046029, intron 3 of 5)	MTD|LTR|MaLR	12690	NR_046029	629206	Mm.391444	NR_046029		Gm20758	-	predicted gene, 20758	ncRNA
common_peak1-14738-35-23-0.846407757741348-1.63799378205027	chr3	86460618	86461718	+	0	NA	intron (NM_030695, intron 46 of 56)	intron (NM_030695, intron 46 of 56)	-108963	NM_011839	23937	Mm.389466	NM_011839	ENSMUSG00000057777	Mab21l2	-	mab-21-like 2 (C. elegans)	protein-coding
common_peak2-31933-15-11-0.4272022498345-0.503257505534083	chr9	63722129	63722591	+	0	NA	Intergenic	(GGGA)n|Simple_repeat|Simple_repeat	-116559	NM_016769	17127	Mm.7320	NM_016769	ENSMUSG00000032402	Smad3	AU022421|Madh3	SMAD family member 3	protein-coding
common_peak1-19139-8-5-0.420259917226415-1.10484139239135	chr9	83575783	83576293	+	0	NA	Intergenic	Intergenic	-9044	NR_046066	100039222	Mm.405596	NR_046066		Gm2109	-	predicted gene 2109	ncRNA
common_peak1-10698-45-59--0.046532570263647-0.302885977585733	chr14	56885307	56886393	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-4753	NM_013542	14939	Mm.14874	NM_013542	ENSMUSG00000015437	Gzmb	AI553453|CCP-1/C11|CCP1|Ctla-1|Ctla1|GZB	granzyme B	protein-coding
unique_peak2-38968-1-6--2.43441193227435-1.56314192529759	chr8	34275410	34275813	+	0	NA	Intergenic	L1VL4|LINE|L1	-215113	NM_001177589	100042715	Mm.291093	NM_001177589		Gm3985	-	predicted gene 3985	protein-coding
common_peak2-24785-14-52--1.82870429420555-4.99657067904013	chr17	64331328	64331999	+	0	NA	intron (NM_008000, intron 6 of 13)	RSINE1|SINE|B4	44342	NM_008000	14158	Mm.23039	NM_008000	ENSMUSG00000000127	Fert2	AV082135|C330004K01Rik|Fer|Fert	fer (fms/fps related) protein kinase, testis specific 2	protein-coding
unique_peak1-3619-9-2-1.60465090568306-1.87199725847353	chr19	34673630	34674160	+	0	NA	promoter-TSS (NM_001110517)	promoter-TSS (NM_001110517)	22	NM_001110517	667373	Mm.371956	NM_001101605	ENSMUSG00000079339	Gm14446	OTTMUSG00000016644	predicted gene 14446	protein-coding
common_peak2-28968-11-9-0.186765489364251-0.344532117358383	chr5	103774290	103774742	+	0	NA	Intergenic	Intergenic	-46468	NR_040699	74624	Mm.389662	NR_040699		4930429D17Rik	-	RIKEN cDNA 4930429D17 gene	ncRNA
common_peak1-10526-82-45-1.36970118824872-7.82020973033603	chr14	8356191	8357649	+	0	NA	Intergenic	L1Md_T|LINE|L1	44160	NM_001270842	100041874	Mm.350858	NM_001270842	ENSMUSG00000079364	Gm3558	ENSMUSG00000079364	predicted gene 3558	protein-coding
common_peak2-32040-20-25--0.212364933549899-0.342639663781856	chr9	78481926	78482409	+	0	NA	intron (NM_153098, intron 2 of 32)	intron (NM_153098, intron 2 of 32)	18814	NM_153098	235505	Mm.32955	NM_153098	ENSMUSG00000046186	Cd109	9930012E15Rik|AI480638|GARP	CD109 antigen	protein-coding
unique_peak2-33078-4-6--0.830815435910851-0.989110657569874	chr10	80025638	80026083	+	0	NA	Intergenic	ID_B1|SINE|B4	-1555	NM_025852	66932	Mm.1116	NM_025852	ENSMUSG00000047417	Rexo1	1700021P10Rik|2610511M11Rik|AW050347|EloA-BP1|Tceb3bp1	REX1, RNA exonuclease 1 homolog (S. cerevisiae)	protein-coding
common_peak2-29864-28-24-0.409102930046738-0.610902792227729	chr6	106799457	106800148	+	0	NA	Intergenic	B4A|SINE|B4	-49721	NM_175357	58799	Mm.290085	NM_021449		Crbn	2610203G15Rik|2900045O07Rik|AF229032|AW108261|piL	cereblon	protein-coding
unique_peak2-38376-4-18--2.27138802729683-2.39353597935438	chr7	13277991	13278704	+	0	NA	TTS (NM_001104648)	TTS (NM_001104648)	-8007	NM_001104645	100042499	Mm.469870	NM_001104645	ENSMUSG00000091045	Vmn2r55	-	vomeronasal 2, receptor 55	protein-coding
common_peak1-9707-13-10-0.319040412000471-0.446472590016315	chr12	28675231	28675801	+	0	NA	Intergenic	Lx8|LINE|L1	557686	NM_001177964	68511	Mm.310284	NM_001177964		Dcdc2c	1110015M06Rik	doublecortin domain containing 2C	protein-coding
common_peak2-28366-6-7--0.434601889619698-0.97990265578305	chr4	137255498	137255905	+	0	NA	intron (NM_001081155, intron 2 of 24)	intron (NM_001081155, intron 2 of 24)	18119	NM_001256218	110351	Mm.180763	NM_029563	ENSMUSG00000041351	Rap1gap	1300019I11Rik|2310004O14Rik|AI427470|ARPP-90|Rap1GAP1|Rap1ga1	Rap1 GTPase-activating protein	protein-coding
common_peak2-29383-87-88-0.519903674814771-1.91885007462478	chr6	38353584	38355115	+	0	NA	intron (NM_153600, intron 10 of 17)	intron (NM_153600, intron 10 of 17)	22825	NM_153600	264134	Mm.253446	NM_153600	ENSMUSG00000056832	Ttc26	9330141E21Rik|9430097H08Rik	tetratricopeptide repeat domain 26	protein-coding
common_peak1-10799-16-15-0.118263642268062-0.328191099940264	chr14	76818030	76818697	+	0	NA	exon (NM_207652, exon 1 of 3)	exon (NM_207652, exon 1 of 3)	2735	NM_207652	21807	Mm.153272	NM_009366	ENSMUSG00000022010	Tsc22d1	AA589566|AW105905|Egr5|TSC-22|Tgfb1i4|Tsc|Tsc22	TSC22 domain family, member 1	protein-coding
unique_peak1-3539-9-0-3.18961340640422-3.01029995663981	chr19	22181369	22181862	+	0	NA	Intergenic	Intergenic	-31992	NM_001035239	226025	Mm.131943	NM_177341	ENSMUSG00000052387	Trpm3	6330504P12Rik|9330180E14|AU018608|B930001P07Rik|LTRPC3|MLSN2	transient receptor potential cation channel, subfamily M, member 3	protein-coding
common_peak1-14889-20-25--0.212364933549899-0.342639663781856	chr3	96160468	96161228	+	0	NA	Intergenic	Intergenic	57908	NR_001579	21748		NR_001579	ENSMUSG00000064796	Terc	mTER|mTR	telomerase RNA component	ncRNA
common_peak2-27168-15-21--0.447266868081641-0.448200956659578	chr3	32395953	32396731	+	0	NA	Intergenic	RMER15|LTR|ERVL	-5451	NM_001195074	100502876	Mm.383358	NM_001195074	ENSMUSG00000091091	Kcnmb3	EG435726|Gm5707	potassium large conductance calcium-activated channel, subfamily M, beta member 3	protein-coding
common_peak1-19378-15-10-0.552733131918359-0.604422558181019	chrX	37084658	37085404	+	0	NA	Intergenic	ORR1A0|LTR|MaLR	131750	NM_001191032	100504400	Mm.373409	NM_001191032	ENSMUSG00000095240	Cypt14	-	cysteine-rich perinuclear theca 14	protein-coding
common_peak1-16018-18-7-1.31291915122835-1.71830443967823	chr5	35722455	35723195	+	0	NA	Intergenic	Intergenic	-8941	NM_010445	15371	Mm.358606	NM_010445	ENSMUSG00000067438	Hmx1	Nkx5-3	H6 homeobox 1	protein-coding
unique_peak1-720-11-2-1.92373108353046-2.32232533660526	chr10	93333678	93334190	+	0	NA	intron (NM_019648, intron 6 of 11)	intron (NM_019648, intron 6 of 11)	20013	NM_019648	56307	Mm.289329	NM_019648	ENSMUSG00000036112	Metap2	4930584B20Rik|A930035J23Rik|AI047573|AL024412|AU014659|Amp2|Mnpep|p67|p67eIF2	methionine aminopeptidase 2	protein-coding
unique_peak1-2082-11-8-0.338768582809301-1.14218153353838	chr15	36876110	36876819	+	0	NA	Intergenic	Intergenic	60693	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
unique_peak2-32872-2-6--1.72480917832092-1.26211192963361	chr10	7727031	7727433	+	0	NA	Intergenic	Intergenic	-51311	NM_138667	68652	Mm.193041	NM_138667	ENSMUSG00000015755	Tab2	1110030N06Rik|A530078N03Rik|Map3k7ip2|mKIAA0733	TGF-beta activated kinase 1/MAP3K7 binding protein 2	protein-coding
unique_peak2-37843-1-7--2.62705701021674-1.80617997398389	chr5	135522881	135523222	+	0	NA	intron (NM_016801, intron 8 of 9)	B3|SINE|B2	-17025	NM_025362	66114	Mm.178012	NM_025362	ENSMUSG00000061118	Dnajc30	1300007M11Rik|Wbscr18	DnaJ (Hsp40) homolog, subfamily C, member 30	protein-coding
unique_peak1-5886-11-4-1.18676548936425-1.68134727924692	chr6	86636393	86636972	+	0	NA	Intergenic	Intergenic	-2197	NM_025665	66618	Mm.182650	NM_025665	ENSMUSG00000001158	Snrnp27	2610209M04Rik|AI449063|AU022368|Ry1	small nuclear ribonucleoprotein 27 (U4/U6.U5)	protein-coding
common_peak1-19372-39-58--0.266881802442688-0.465606867440106	chrX	20687650	20689033	+	0	NA	Intergenic	Lx3B|LINE|L1	-21986	NM_183185	245368	Mm.220470	NM_183185	ENSMUSG00000031079	Zfp300	D930016N04Rik	zinc finger protein 300	protein-coding
common_peak1-7979-32-37-0.0311645057760748-0.312460117298692	chr1	159888527	159889735	+	0	NA	Intergenic	Intergenic	397260	NM_207583	240843	Mm.329579	NM_207583	ENSMUSG00000004031	Brinp2	6430517E21Rik|BB361039|Fam5b|mKIAA1747	bone morphogenic protein/retinoic acid inducible neural-specific 2	protein-coding
unique_peak2-37529-7-8--0.370834171144123-1.00793137938329	chr5	24475361	24475789	+	0	NA	intron (NM_145401, intron 3 of 15)	intron (NM_145401, intron 3 of 15)	-61248	NM_001170556	108099	Mm.33649	NM_145401	ENSMUSG00000028944	Prkag2	2410051C13Rik|AAKG|AAKG2|AI854673|H91620p|WPWS	protein kinase, AMP-activated, gamma 2 non-catalytic subunit	protein-coding
unique_peak2-39415-2-5--1.50241675698448-1.08602067057793	chr9	37236404	37236785	+	0	NA	intron (NM_001164767, intron 3 of 27)	intron (NM_001164767, intron 3 of 27)	4166	NM_001164767	19649	Mm.212826	NM_011248	ENSMUSG00000032128	Robo3	Rbig1|Rig-1|Rig1|Robo3a|Robo3b	roundabout homolog 3 (Drosophila)	protein-coding
unique_peak2-38009-7-7--0.200909169701811-0.97990265578305	chr6	30687812	30688197	+	0	NA	promoter-TSS (NM_008590)	promoter-TSS (NM_008590)	-46	NM_008590	17294	Mm.335639	NM_008590	ENSMUSG00000051855	Mest	AA408879|AI256745|Peg1	mesoderm specific transcript	protein-coding
common_peak2-25707-23-9-1.39983940962172-2.17218792383888	chr19	20601192	20601736	+	0	NA	intron (NR_015502, intron 2 of 3)	L1Md_T|LINE|L1	25356	NR_045778	320155	Mm.447252	NR_045778		C730002L08Rik	-	RIKEN cDNA C730002L08 gene	ncRNA
common_peak1-15355-6-6--0.241956811677302-0.947717972411649	chr4	57143343	57143743	+	0	NA	intron (NM_019427, intron 1 of 15)	L2b|LINE|L2	12485	NM_019427	54357	Mm.28217	NM_019427	ENSMUSG00000028434	Epb4.1l4b	6430543G08Rik|AA589614|AU021054|BB007528|D4Ertd346e|Ehm2|Epb41l4b|Lulu2	erythrocyte protein band 4.1-like 4b	protein-coding
unique_peak2-37687-4-4--0.345388608740609-0.864171920961574	chr5	99236871	99237200	+	0	NA	Intergenic	Intergenic	-46423	NM_173404	110075	Mm.209571	NM_173404	ENSMUSG00000029335	Bmp3	9130206H07|9530029I04Rik	bone morphogenetic protein 3	protein-coding
common_peak1-16735-11-10-0.0492619656143161-0.31137425193576	chr6	31088738	31089188	+	0	NA	intron (NR_110471, intron 3 of 3)	intron (NR_110471, intron 3 of 3)	-75870	NR_029532	387223		NR_029532	miRBase:MI0000143	Mir29b-1	Mirn29b|Mirn29b-1	microRNA 29b-1	ncRNA
unique_peak1-2230-24-9-1.47128180788035-2.52428350728854	chr15	75270433	75271471	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-8693	NR_108041	105892	Mm.38909	NM_001039720	ENSMUSG00000053168	9030619P08Rik	-	lymphocyte antigen 6 complex pseudogene	pseudo
common_peak1-17090-48-68--0.137597305543355-0.342480376340174	chr6	112695572	112697088	+	0	NA	intron (NM_080448, intron 14 of 21)	PB1D10|SINE|Alu	-49666	NM_001167730	58186	Mm.103812	NM_021385	ENSMUSG00000030254	Rad18	2810024C04Rik|Rad18sc	RAD18 homolog (S. cerevisiae)	protein-coding
common_peak2-29238-16-9-0.796335547380699-0.844317084070804	chr5	139173923	139174372	+	0	NA	Intergenic	Intergenic	-56888	NM_030565	80752	Mm.320355	NM_030565	ENSMUSG00000025854	Fam20c	C76981|DMP-4|DMP4|GEF-CK|mKIAA4081	family with sequence similarity 20, member C	protein-coding
common_peak1-8538-49-52-0.278363368461985-0.571074946341584	chr10	91170590	91172448	+	0	NA	Intergenic	Intergenic	363411	NR_029812	723955		NR_029812	miRBase:MI0000715	Mir135a-2	Mirn135a-2	microRNA 135a-2	ncRNA
unique_peak2-32925-2-6--1.72480917832092-1.26211192963361	chr10	25270818	25271208	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-14935	NM_001195596	100504474	Mm.46323	NM_001195596	ENSMUSG00000096546	Smlr1	2010003K15Rik	small leucine-rich protein 1	protein-coding
common_peak1-17937-11-23--1.07626891646954-1.24082643394777	chr7	127375560	127376024	+	0	NA	intron (NM_026458, intron 10 of 30)	Charlie1a|DNA|MER1_type	28314	NM_026458	67928	Mm.158178	NM_026458	ENSMUSG00000062017	Abca14	1700110B15Rik|4930539G24Rik	ATP-binding cassette, sub-family A (ABC1), member 14	protein-coding
common_peak2-29615-8-7-0.00522241794757061-1.00793137938329	chr6	54179059	54179607	+	0	NA	intron (NM_001163640, intron 6 of 12)	intron (NM_001163640, intron 6 of 12)	-43483	NM_023543	69993	Mm.321147	NM_023543	ENSMUSG00000004633	Chn2	1700026N20Rik|4930557O16Rik|ARHGAP3|Bch	chimerin 2	protein-coding
unique_peak1-5217-9-1-2.18961340640422-2.31132995230379	chr5	36553781	36554417	+	0	NA	intron (NM_030889, intron 2 of 26)	intron (NM_030889, intron 2 of 26)	7429	NM_175249	76943	Mm.44242	NM_175249	ENSMUSG00000043430	Psapl1	2310020A21Rik	prosaposin-like 1	protein-coding
common_peak2-22066-12-7-0.648775985087639-0.697979855752659	chr12	73053845	73054318	+	0	NA	intron (NM_001286452, intron 15 of 24)	intron (NM_001286452, intron 15 of 24)	63551	NM_001286452	208846	Mm.87417	NM_026102	ENSMUSG00000034574	Daam1	-	dishevelled associated activator of morphogenesis 1	protein-coding
common_peak1-15798-31-22-0.70167671475611-1.13829382151971	chr4	156093194	156094484	+	0	NA	Intergenic	Intergenic	-484873	NM_198305	231003	Mm.423038	NM_198305	ENSMUSG00000078484	Klhl17	AL022703|BC058738	kelch-like 17	protein-coding
common_peak1-11133-14-5-1.31425365963649-1.4372489031793	chr15	67177187	67178031	+	0	NA	intron (NR_045140, intron 7 of 8)	intron (NR_045140, intron 7 of 8)	119278	NR_045140	69334	Mm.63770	NR_045140		1700012I11Rik	-	RIKEN cDNA 1700012I11 gene	ncRNA
common_peak2-20527-40-43-0.199544064113801-0.449053920623498	chr10	62449287	62450184	+	0	NA	intron (NM_027425, intron 2 of 17)	RSINE1|SINE|B4	6764	NM_027425	70432	Mm.234587	NM_027425		Rufy2	2610111M19Rik|AI844453|Denn|LZ-FYVE|ZFYVE13	RUN and FYVE domain-containing 2	protein-coding
common_peak2-21098-4-7--1.02346051385325-1.09384600808989	chr11	51832576	51832981	+	0	NA	intron (NM_001166656, intron 4 of 12)	intron (NM_001166656, intron 4 of 12)	15055	NM_001166653	213084	Mm.280557	NM_153785	ENSMUSG00000020389	Cdkl3	AI852479|B230379H01Rik	cyclin-dependent kinase-like 3	protein-coding
unique_peak1-7326-11-3-1.50869358425161-1.95434855131066	chr9	122135457	122136032	+	0	NA	intron (NM_001271873, intron 11 of 12)	B4A|SINE|B4	47402	NR_106185	102465896		NR_106185		Mir8106	mmu-mir-8106	microRNA mir-8106	ncRNA
common_peak1-16543-14-18--0.348711353085941-0.360333814299795	chr5	143548615	143549355	+	0	NA	exon (NM_178242, exon 4 of 16)	exon (NM_178242, exon 4 of 16)	30081	NM_178242	231861	Mm.354649	NM_178242	ENSMUSG00000039477	Tnrc18	BC025631|EG381742|Zfp469	trinucleotide repeat containing 18	protein-coding
unique_peak1-3957-22-7-1.6472841050874-2.63337704757512	chr2	30691696	30692796	+	0	NA	Intergenic	Intergenic	-8426	NM_133346	72323	Mm.27656	NM_133346		Asb6	2510004M11Rik|AA409356	ankyrin repeat and SOCS box-containing 6	protein-coding
unique_peak2-37632-3-6--1.22133801201688-1.08602067057793	chr5	72855351	72855760	+	0	NA	intron (NM_016869, intron 2 of 21)	intron (NM_016869, intron 2 of 21)	39892	NM_016869	53419	Mm.332425	NM_016869	ENSMUSG00000005220	Corin	AV273130|Lrp4	corin	protein-coding
unique_peak1-1323-14-4-1.57728806547028-2.4322161449009	chr12	8072660	8073292	+	0	NA	Intergenic	Intergenic	88493	NM_009693	238055	Mm.221239	NM_009693	ENSMUSG00000020609	Apob	AI315052|Apo B-100|apob-100|apob-48	apolipoprotein B	protein-coding
common_peak1-9019-36-52--0.248599368395444-0.410818340144431	chr11	61407874	61408921	+	0	NA	Intergenic	RLTR10-int|LTR|ERVK	-15208	NM_001252189	13855	Mm.139695	NM_010148	ENSMUSG00000001036	Epn2	9530051D10Rik|AA536924|Ibp2	epsin 2	protein-coding
common_peak2-29542-77-114--0.0609634713883773-0.316541337305917	chr6	39204937	39206677	+	0	NA	Intergenic	Intergenic	-49035	NM_001033430	338523	Mm.293175	NM_001033430	ENSMUSG00000042599	Kdm7a	A630082K20Rik|BB041802|ENSMUSG00000073143|Jhdm1d|mKIAA1718	lysine (K)-specific demethylase 7A	protein-coding
common_peak2-32373-1-17--3.79698201165906-4.46429741251234	chrX	103749739	103749976	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-28668	NM_001033541	331493	Mm.249319	NM_001033541	ENSMUSG00000073010	Gm5127	B130007I08|EG331493	predicted gene 5127	protein-coding
common_peak1-18383-17-26--0.53659116395843-0.538442145997695	chr8	70838838	70839545	+	0	NA	intron (NM_028182, intron 4 of 8)	L1_Mus1|LINE|L1	38764	NM_028182	72281	Mm.40974	NM_028182	ENSMUSG00000053886	Sh2d4a	2210402M20Rik|SH2A	SH2 domain containing 4A	protein-coding
common_peak1-19003-22-15-0.647284105087405-0.849699271740893	chr9	59694892	59695644	+	0	NA	intron (NM_173018, intron 16 of 43)	L2a|LINE|L2	96287	NM_173018	270163	Mm.249545	NM_173018	ENSMUSG00000039585	Myo9a	4732465J09Rik|C130068I12Rik|C230003M11	myosin IXa	protein-coding
unique_peak1-3203-7-1-1.79909083029819-1.80617997398389	chr18	55605588	55606093	+	0	NA	Intergenic	Intergenic	-456006	NM_175751	269023	Mm.192984	NM_175751	ENSMUSG00000052713	Zfp608	4932417D18Rik|D430007A19Rik|Znf608	zinc finger protein 608	protein-coding
common_peak1-9135-22-7-1.6472841050874-2.63337704757512	chr11	75565620	75566413	+	0	NA	intron (NM_009536, intron 2 of 5)	intron (NM_009536, intron 2 of 5)	19627	NM_009536	22627	Mm.234700	NM_009536	ENSMUSG00000020849	Ywhae	AU019196	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide	protein-coding
common_peak2-26220-25-23-0.27688740462395-0.451698068655807	chr2	26915807	26917062	+	0	NA	TTS (NM_025376)	TTS (NM_025376)	6954	NM_001159602	66139	Mm.330087	NM_025376	ENSMUSG00000009214	Tmem8c	1110002H13Rik|AI131587	transmembrane protein 8C	protein-coding
common_peak2-26267-11-22--1.0148683718054-1.11267835143409	chr2	30472433	30473448	+	0	NA	Intergenic	Intergenic	22376	NM_030137	78617	Mm.40413	NM_030137	ENSMUSG00000047363	Cstad	9530039B02Rik	CSA-conditional, T cell activation-dependent protein	protein-coding
common_peak2-31454-54-96--0.426827080557394-1.04808805211778	chr8	105170492	105171715	+	0	NA	intron (NM_009866, intron 11 of 12)	intron (NM_009866, intron 11 of 12)	137908	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
unique_peak2-32530-1-4--1.94898510510411-1.10720996964787	chr1	63075476	63075882	+	0	NA	Intergenic	RMER19B|LTR|ERVK	85162	NM_001081436	227195	Mm.74718	NM_001081436	ENSMUSG00000040865	Ino80d	7330405I11|A430093A21Rik|BC010584|OTTMUSG00000002594	INO80 complex subunit D	protein-coding
common_peak1-18205-25-9-1.53992181045774-2.70611768348013	chr8	23058194	23059216	+	0	NA	intron (NM_139223, intron 1 of 1)	intron (NM_139223, intron 1 of 1)	1471	NM_139223	246083	Mm.219548	NM_139223		Defb13	BD-13	defensin beta 13	protein-coding
unique_peak1-6591-11-0-3.50869358425161-3.61235994796777	chr7	144740857	144741462	+	0	NA	Intergenic	Intergenic	111802	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
common_peak1-15767-12-19--0.673152109799724-0.546772548767014	chr4	151995310	151996019	+	0	NA	Intergenic	Intergenic	-75985	NR_033138	330004	Mm.291863	NM_001033414		Gm833	-	predicted gene 833	ncRNA
common_peak1-8053-23-16-0.634304663258741-0.82304638657543	chr1	172309561	172310385	+	0	NA	intron (NM_027528, intron 3 of 7)	intron (NM_027528, intron 3 of 7)	70981	NM_001039593	76925	Mm.33631	NM_001039593	ENSMUSG00000042800	1700015E13Rik	-	RIKEN cDNA 1700015E13 gene	protein-coding
common_peak2-20346-15-21--0.447266868081641-0.448200956659578	chr10	7792369	7793234	+	0	NA	Intergenic	MTB|LTR|MaLR	-116880	NM_138667	68652	Mm.193041	NM_138667	ENSMUSG00000015755	Tab2	1110030N06Rik|A530078N03Rik|Map3k7ip2|mKIAA0733	TGF-beta activated kinase 1/MAP3K7 binding protein 2	protein-coding
common_peak2-32214-55-91--0.318942084904311-0.682042446238145	chr9	121718265	121719891	+	0	NA	intron (NM_028384, intron 11 of 15)	PB1D9|SINE|Alu	-17453	NM_029095	74770	Mm.44195	NM_029095	ENSMUSG00000032523	Hhatl	1110011D13Rik|Gup1	hedgehog acyltransferase-like	protein-coding
unique_peak1-2957-10-4-1.03448725012141-1.5150158574804	chr17	71124583	71125155	+	0	NA	intron (NM_001128180, intron 6 of 9)	L1M4|LINE|L1	71248	NM_001164077	21815	Mm.101034	NM_009372	ENSMUSG00000047407	Tgif1	AA959811|AI462167|Tgif	TGFB-induced factor homeobox 1	protein-coding
common_peak1-16703-10-6-0.549060422951165-1.21398586181642	chr6	22352915	22353386	+	0	NA	Intergenic	Intergenic	-47069	NM_138587	27999	Mm.490307	NM_138587	ENSMUSG00000029672	Fam3c	D6Wsu176e|Ilei	family with sequence similarity 3, member C	protein-coding
unique_peak2-38257-10-11--0.228547155712387-0.31137425193576	chr6	125167075	125167653	+	0	NA	intron (NM_009496, intron 1 of 4)	intron (NM_009496, intron 1 of 4)	1765	NM_001080557	22317	Mm.32321	NM_009496	ENSMUSG00000030337	Vamp1	Syb-1|Syb1|VAMP-1|lew	vesicle-associated membrane protein 1	protein-coding
unique_peak1-3508-10-2-1.77145284428761-2.09384600808989	chr19	16204958	16205585	+	0	NA	Intergenic	Intergenic	-2050	NM_008139	14682	Mm.439701	NM_008139	ENSMUSG00000024639	Gnaq	1110005L02Rik|6230401I02Rik|AA408290|AW060788|Dsk1|Dsk10|Galphaq|Gq|GqI	guanine nucleotide binding protein, alpha q polypeptide	protein-coding
unique_peak2-34368-3-9--1.73591118484664-1.57096726280955	chr13	109315458	109315917	+	0	NA	Intergenic	Intergenic	-128684	NM_011056	238871	Mm.434429	NM_011056		Pde4d	9630011N22Rik|Dpde3	phosphodiesterase 4D, cAMP specific	protein-coding
unique_peak1-3887-10-2-1.77145284428761-2.09384600808989	chr2	14631543	14632055	+	0	NA	intron (NM_023116, intron 2 of 13)	B4A|SINE|B4	-10470	NR_028497	625342	Mm.484784	NR_028497		Gm13315	OTTMUSG00000011384	lactate dehydrogenase A pseudogene	pseudo
unique_peak1-355-6-0-2.5653981103803-2.10720996964787	chr1	136325777	136326293	+	0	NA	intron (NM_028320, intron 6 of 7)	intron (NM_028320, intron 6 of 7)	13991	NM_028320	72674	Mm.259976	NM_028320		Adipor1	2810031L11Rik|ACDCR1|CGI-45|Paqr1	adiponectin receptor 1	protein-coding
common_peak2-27505-25-40--0.495702099272978-0.683454027796267	chr3	95110705	95111806	+	0	NA	promoter-TSS (NM_023628)	promoter-TSS (NM_023628)	-157	NM_023628	71790	Mm.218844	NM_023628	ENSMUSG00000015702	Anxa9	1110003P15Rik|2310069F17Rik	annexin A9	protein-coding
common_peak2-30585-94-153--0.137196972845585-0.426319871502236	chr7	80401662	80403575	+	0	NA	Intergenic	Lx2|LINE|L1	-52648	NR_105062	100505025	Mm.445959	NR_105062		LOC100505025	-	uncharacterized LOC100505025	ncRNA
common_peak1-16126-32-30-0.324895708832785-0.556669751231381	chr5	67260436	67261645	+	0	NA	intron (NM_001001980, intron 2 of 25)	L1MB8|LINE|L1	-98615	NM_001256122	77569	Mm.374778	NM_001001980	ENSMUSG00000037736	Limch1	3732412D22Rik|mKIAA1102	LIM and calponin homology domains 1	protein-coding
unique_peak1-2571-7-4-0.477162735410827-1.09384600808989	chr16	25529695	25530171	+	0	NA	Intergenic	Intergenic	-153918	NM_001127259	22061	Mm.20894	NM_011641	ENSMUSG00000022510	Trp63	AI462811|Ket|P51/P63|P63|P73l|Tp63|Trp53rp1	transformation related protein 63	protein-coding
unique_peak1-3670-17-3-2.21829633820504-3.11807310444576	chr19	41326375	41327096	+	0	NA	intron (NM_133352, intron 2 of 14)	B1F1|SINE|Alu	11759	NM_133352	107358	Mm.246440	NM_133352	ENSMUSG00000025016	Tm9sf3	1810073M23Rik|2810031D16Rik|AI115521|AI413748|AW146116|AW549777|Smbp|mKIAA4036	transmembrane 9 superfamily member 3	protein-coding
unique_peak2-35394-10-6-0.549060422951165-1.21398586181642	chr17	31877148	31877620	+	0	NA	Intergenic	Intergenic	62508	NM_001278570	12954	Mm.1228	NM_013501	ENSMUSG00000024041	Cryaa	Acry-1|Crya-1|Crya1|DAcry-1|lop18	crystallin, alpha A	protein-coding
common_peak1-16944-35-33-0.343907417212165-0.587580258678924	chr6	83794155	83795599	+	0	NA	Intergenic	Intergenic	-13142	NM_146169	232164	Mm.404420	NM_146169	ENSMUSG00000045896	Paip2b	-	poly(A) binding protein interacting protein 2B	protein-coding
common_peak2-22307-10-7-0.356415345008769-1.12966497611638	chr13	20163876	20164317	+	0	NA	Intergenic	Intergenic	-18280	NM_080288	140580	Mm.342392	NM_080288	ENSMUSG00000041112	Elmo1	6330578D22Rik|C230095H21Rik|CED-12	engulfment and cell motility 1	protein-coding
unique_peak2-33317-3-6--1.22133801201688-1.08602067057793	chr11	8633214	8633663	+	0	NA	Intergenic	B2_Mm1a|SINE|B2	-68900	NM_001083587	319939	Mm.337820	NM_001083587	ENSMUSG00000020422	Tns3	BC023928|F830010I22Rik|TEM6|Tens1	tensin 3	protein-coding
common_peak1-17862-31-17-1.05531366937081-1.94848218498813	chr7	113459294	113460670	+	0	NA	Intergenic	B2_Mm2|SINE|B2	8060	NR_030720	668128	Mm.484022	NR_030720		Gm8989	EG668128|Gm21911	very large inducible GTPase 1 pseudogene	pseudo
common_peak2-19756-24-23-0.208247402046561-0.407645899519042	chr1	77461459	77462285	+	0	NA	intron (NM_007936, intron 3 of 17)	intron (NM_007936, intron 3 of 17)	31471	NR_105770	102465180		NR_105770		Mir6352	mmu-mir-6352	microRNA mir-6352	ncRNA
common_peak2-31879-29-25-0.411850362474019-0.664636481544818	chr9	55511307	55512189	+	0	NA	intron (NM_001081341, intron 25 of 32)	Lx9|LINE|L1	122792	NM_027397	104360	Mm.273996	NM_027397	ENSMUSG00000032318	Isl2	3110001N10Rik	insulin related protein 2 (islet 2)	protein-coding
common_peak1-8857-11-17--0.661231417190699-0.58239619684445	chr11	32226477	32226986	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-21080	NM_177364	268396	Mm.227616	NM_177364	ENSMUSG00000040711	Sh3pxd2b	G431001E03Rik|TSK4|fad49	SH3 and PX domains 2B	protein-coding
common_peak2-26596-19-29--0.504203268946832-0.580176690544129	chr2	112265562	112266245	+	0	NA	Intergenic	Lx5|LINE|L1	-29279	NM_133749	73024	Mm.268027	NM_133749		Emc7	2900064A13Rik|AI451465|ORF3|c11orf3	ER membrane protein complex subunit 7	protein-coding
common_peak1-17744-13-13--0.0288828914198356-0.309074325783021	chr7	81522770	81523482	+	0	NA	intron (NM_001038643, intron 2 of 10)	intron (NM_001038643, intron 2 of 10)	176540	NM_023908	108116	Mm.425467	NM_023908	ENSMUSG00000025790	Slco3a1	5830414C08Rik|Anr1|MJAM|OATP-D|R75096|Slc21a11	solute carrier organic anion transporter family, member 3a1	protein-coding
unique_peak1-1630-7-1-1.79909083029819-1.80617997398389	chr13	45455004	45455509	+	0	NA	Intergenic	B3A|SINE|B2	-29855	NM_153789	218203	Mm.212855	NM_153789	ENSMUSG00000038175	Mylip	9430057C20Rik|Mir	myosin regulatory light chain interacting protein	protein-coding
unique_peak2-34619-11-15--0.491306415748387-0.435191258261915	chr14	76568909	76569649	+	0	NA	Intergenic	B1_Mur2|SINE|Alu	58581	NM_013745	27275	Mm.21138	NM_013745	ENSMUSG00000022009	Nufip1	Nufip	nuclear fragile X mental retardation protein interacting protein 1	protein-coding
common_peak2-19834-69-65-0.550748327900279-1.68268334293412	chr1	90518467	90520143	+	0	NA	Intergenic	Intergenic	71213	NR_037971	100503197	Mm.99352	NR_037971		Gm19589	-	predicted gene, 19589	ncRNA
unique_peak2-36336-14-21--0.560215458279653-0.519193887192484	chr2	91257242	91258189	+	0	NA	intron (NM_175123, intron 2 of 8)	intron (NM_175123, intron 2 of 8)	27084	NM_175123	228356	Mm.386861	NM_175123	ENSMUSG00000040591	1110051M20Rik	AI586322	RIKEN cDNA 1110051M20 gene	protein-coding
unique_peak1-6553-11-2-1.92373108353046-2.32232533660526	chr7	130634307	130634829	+	0	NA	intron (NM_001081329, intron 4 of 6)	L1MA9|LINE|L1	9395	NM_001081329	210162	Mm.135397	NM_175435	ENSMUSG00000030757	Zkscan2	9430065N20Rik|AW493225|Zfp694	zinc finger with KRAB and SCAN domains 2	protein-coding
common_peak2-20735-53-145--1.04885154646409-5.9192018936085	chr10	99261013	99263101	+	0	NA	Intergenic	Intergenic	-39765	NM_027945	71832	Mm.483162	NM_027945	ENSMUSG00000046934	Csl	1700007H16Rik	citrate synthase like	protein-coding
unique_peak2-35495-3-10--1.87341470859657-1.75805390616669	chr17	46273244	46273748	+	0	NA	intron (NM_029338, intron 3 of 4)	intron (NM_029338, intron 3 of 4)	7651	NM_029338	75564	Mm.17993	NM_029338	ENSMUSG00000023966	Rsph9	1700027N10Rik	radial spoke head 9 homolog (Chlamydomonas)	protein-coding
common_peak2-21461-16-14-0.211373046659543-0.364171515310935	chr11	87086388	87087310	+	0	NA	intron (NM_177167, intron 1 of 6)	intron (NM_177167, intron 1 of 6)	85647	NM_177167	320472	Mm.341988	NM_177167	ENSMUSG00000046442	Ppm1e	AW049266|B930008A12Rik|POPX1|PP2CH|mKIAA1072	protein phosphatase 1E (PP2C domain containing)	protein-coding
unique_peak2-36228-5-12--1.40482005414695-1.62698961692433	chr2	35690983	35691660	+	0	NA	intron (NM_029774, intron 6 of 9)	intron (NM_029774, intron 6 of 9)	16611	NR_040618	77665	Mm.400558	NR_040618	ENSMUSG00000086449	9030204H09Rik	-	RIKEN cDNA 9030204H09 gene	ncRNA
common_peak1-18571-27-27-0.184191028837632-0.393151991482004	chr8	105604952	105606119	+	0	NA	Intergenic	L1Md_Gf|LINE|L1	265899	NR_036588	69794	Mm.396139	NR_036588		1600027J07Rik	-	RIKEN cDNA 1600027J07 gene	ncRNA
common_peak2-26398-72-132--0.386698622628872-1.1385147859498	chr2	57237407	57239029	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	147425	NM_010274	14571	Mm.3711	NM_010274	ENSMUSG00000026827	Gpd2	AA408484|AI448216|AU021455|AW494132|GPDH|Gdm1|Gpd-m|Gpdh-m|TISP38	glycerol phosphate dehydrogenase 2, mitochondrial	protein-coding
unique_peak2-37557-3-5--0.998945590680433-0.96108193396963	chr5	31860914	31861352	+	0	NA	Intergenic	Intergenic	12637	NR_102275	100740	Mm.23370	NR_102275		AI839979	-	expressed sequence AI839979	ncRNA
common_peak1-15392-17-13-0.410941416147434-0.546772548767014	chr4	77310792	77311518	+	0	NA	intron (NM_011211, intron 2 of 39)	intron (NM_011211, intron 2 of 39)	546644	NM_011211	19266	Mm.184021	NM_011211	ENSMUSG00000028399	Ptprd	1110002J03Rik|3000002J10Rik|B230219D21Rik|R-PTP-delta	protein tyrosine phosphatase, receptor type, D	protein-coding
unique_peak2-38894-3-7--1.41398308995928-1.23214870625617	chr8	10786888	10787338	+	0	NA	Intergenic	Intergenic	95341	NR_040705	320014	Mm.403203	NR_040705		B930025P03Rik	-	RIKEN cDNA B930025P03 gene	ncRNA
unique_peak1-4844-13-5-1.19350952991661-1.95509489018123	chr3	152490093	152490872	+	0	NA	intron (NM_012028, intron 4 of 4)	ORR1B1-int|LTR|MaLR	113418	NM_025662	329777	Mm.331447	NM_025662	ENSMUSG00000039047	Pigk	3000001O05Rik	phosphatidylinositol glycan anchor biosynthesis, class K	protein-coding
common_peak2-20726-81-135--0.215413238241774-0.580457197164831	chr10	98913566	98916025	+	0	NA	Intergenic	Intergenic	-157010	NR_038019	100504202	Mm.403801	NR_038019		Gm20110	-	predicted gene, 20110	ncRNA
unique_peak2-34285-4-9--1.34538860874061-1.36011389749466	chr13	73749454	73749874	+	0	NA	intron (NM_146047, intron 7 of 16)	intron (NM_146047, intron 7 of 16)	8214	NM_146047	218335	Mm.30099	NM_146047	ENSMUSG00000021610	Clptm1l	C130052I12Rik|Crr9	CLPTM1-like	protein-coding
common_peak1-7479-11-3-1.50869358425161-1.95434855131066	chr1	193396615	193397168	+	0	NA	intron (NM_029766, intron 1 of 14)	B2_Mm2|SINE|B2	2522	NM_029766	76843	Mm.189102	NM_029766	ENSMUSG00000037474	Dtl	2810047L02Rik|5730564G15Rik|Ramp	denticleless homolog (Drosophila)	protein-coding
common_peak1-18643-27-21-0.532114332257938-0.800403172662453	chr8	111369439	111370530	+	0	NA	intron (NM_007496, intron 3 of 9)	intron (NM_007496, intron 3 of 9)	-90776	NR_037295	100526511		NR_037295		Mir3108	mmu-mir-3108	microRNA 3108	ncRNA
common_peak1-10588-12-19--0.673152109799724-0.546772548767014	chr14	30479352	30480028	+	0	NA	intron (NM_009785, intron 2 of 37)	intron (NM_009785, intron 2 of 37)	55360	NM_009785	12294	Mm.386754	NM_009785	ENSMUSG00000021991	Cacna2d3	Cacnad3	calcium channel, voltage-dependent, alpha2/delta subunit 3	protein-coding
common_peak1-11754-19-23--0.18227517405947-0.320777457303847	chr16	37653604	37654528	+	0	NA	intron (NM_026610, intron 1 of 2)	intron (NM_026610, intron 1 of 2)	388	NM_026610	68194	Mm.379154	NM_026610		Ndufb4	0610006N12Rik|1300010H20Rik	NADH dehydrogenase (ubiquinone) 1 beta subcomplex 4	protein-coding
common_peak2-22195-38-46-0.0168638076208927-0.31027100108714	chr12	110590961	110591827	+	0	NA	Intergenic	Lx2A|LINE|L1	-99639	NR_033813	13386	Mm.157069	NM_010052	ENSMUSG00000040856	Dlk1	AW742678|DLK-1|DlkI|FA1|Ly107|Peg9|SCP1|ZOG|pG2|pref-1	delta-like 1 homolog (Drosophila)	protein-coding
common_peak2-28439-20-29--0.418815811017326-0.51032171069054	chr4	149457981	149458986	+	0	NA	Intergenic	MTC|LTR|MaLR	-3129	NM_177366	269604	Mm.219307	NM_177366	ENSMUSG00000047875	Gpr157	F730108M23Rik	G protein-coupled receptor 157	protein-coding
unique_peak1-3365-11-0-3.50869358425161-3.61235994796777	chr19	54820474	54820927	+	0	NA	Intergenic	MLT1A|LTR|MaLR	353237	NM_008149	14732	Mm.210196	NM_008149	ENSMUSG00000024978	Gpam	GPAT|GPAT1	glycerol-3-phosphate acyltransferase, mitochondrial	protein-coding
unique_peak1-4500-11-1-2.50869358425161-2.83420869758413	chr3	10213444	10213932	+	0	NA	Intergenic	Intergenic	-5112	NM_024406	11770	Mm.582	NM_024406	ENSMUSG00000062515	Fabp4	422/aP2|ALBP/Ap2|Ap2|Lbpl	fatty acid binding protein 4, adipocyte	protein-coding
unique_peak2-35244-14-26--0.855671341805824-0.949797625454538	chr16	97616549	97617702	+	0	NA	intron (NM_019517, intron 1 of 8)	HAL1b|LINE|L1	38790	NM_019517	56175	Mm.97885	NM_019517	ENSMUSG00000040605	Bace2	1110059C24Rik|AEPLC|AI850424|ALP56|ARP1|ASP21|BAE2|CDA13|CEAP1|DRAP	beta-site APP-cleaving enzyme 2	protein-coding
common_peak1-14798-45-61--0.0938382850420032-0.317454636273734	chr3	90051395	90052601	+	0	NA	promoter-TSS (NM_013901)	promoter-TSS (NM_013901)	-116	NM_013901	30791	Mm.294709	NM_013901	ENSMUSG00000052310	Slc39a1	Zip1|Zirtl	solute carrier family 39 (zinc transporter), member 1	protein-coding
unique_peak1-1391-16-8-0.948338640825749-1.02063122982878	chr12	65159384	65160168	+	0	NA	Intergenic	Intergenic	416109	NM_001163271	623046	Mm.189552	NM_001163271	ENSMUSG00000043060	Fscb	EG623046	fibrous sheath CABYR binding protein	protein-coding
common_peak2-27972-59-90--0.182430639326118-0.428837433128845	chr4	42999562	43000592	+	0	NA	intron (NM_009503, intron 7 of 16)	intron (NM_009503, intron 7 of 16)	13302	NM_009503	269523	Mm.245976	NM_009503	ENSMUSG00000028452	Vcp	3110001E05|CDC48|p97|p97/VCP	valosin containing protein	protein-coding
unique_peak2-34842-7-11--0.785871670422967-1.21681515183528	chr15	75969211	75969729	+	0	NA	Intergenic	Intergenic	-12484	NM_001142968	271278	Mm.205253	NM_198172	ENSMUSG00000044361	BC024139	6230424I18Rik	cDNA sequence BC024139	protein-coding
common_peak2-24750-41-95--0.883813795872496-3.07270752173747	chr17	53566769	53568242	+	0	NA	intron (NM_172497, intron 6 of 12)	intron (NM_172497, intron 6 of 12)	35141	NM_172497	211482	Mm.60887	NM_172497	ENSMUSG00000023931	Efhb	4921525D22Rik	EF hand domain family, member B	protein-coding
common_peak2-20378-49-97--0.608426021090025-1.78026981523161	chr10	17722463	17724658	+	0	NA	Intergenic	RLTR25A|LTR|ERVK	19498	NM_028440	73112	Mm.276041	NM_028440	ENSMUSG00000078453	Abracl	1700028I04Rik|3110003A17Rik	ABRA C-terminal like	protein-coding
common_peak2-21722-12-5-1.06381348436648-1.78669045979184	chr11	113060602	113060998	+	0	NA	intron (NR_015556, intron 1 of 2)	intron (NR_015556, intron 1 of 2)	2352	NR_015556	72386	Mm.266961	NR_015556	ENSMUSG00000087259	2610035D17Rik	-	RIKEN cDNA 2610035D17 gene	ncRNA
common_peak1-15765-10-13--0.450939577048835-0.386243247519795	chr4	151862146	151862539	+	0	NA	intron (NM_153424, intron 2 of 29)	intron (NM_153424, intron 2 of 29)	10091	NM_153424	260305	Mm.302496	NM_153424	ENSMUSG00000039577	Nphp4	4930564O18Rik|nmf192	nephronophthisis 4 (juvenile) homolog (human)	protein-coding
common_peak2-24506-48-61-0.0167308408479396-0.308035049112922	chr17	26252503	26253765	+	0	NA	intron (NM_021793, intron 1 of 12)	intron (NM_021793, intron 1 of 12)	2873	NM_021793	60455	Mm.304656	NM_021793	ENSMUSG00000024180	Tmem8	AW490096|M83|Tmem8a	transmembrane protein 8 (five membrane-spanning domains)	protein-coding
unique_peak2-33467-4-5--0.608423014574403-0.909929411522249	chr11	69045711	69046171	+	0	NA	intron (NM_008192, intron 4 of 18)	intron (NM_008192, intron 4 of 18)	4583	NM_008192	14919	Mm.291816	NM_008192	ENSMUSG00000020890	Gucy2e	GC-E|GC1|ROS-GC1	guanylate cyclase 2e	protein-coding
unique_peak1-549-9-1-2.18961340640422-2.31132995230379	chr1	191803071	191803602	+	0	NA	Intergenic	Intergenic	-57169	NM_026796	226830	Mm.156895	NM_026796	ENSMUSG00000026603	Smyd2	1110020E07Rik|4930402C15|KMT3C|Zmynd14	SET and MYND domain containing 2	protein-coding
common_peak1-14516-36-55--0.328033835889849-0.518540604135986	chr3	27453489	27454578	+	0	NA	intron (NM_173182, intron 4 of 25)	intron (NM_173182, intron 4 of 25)	29884	NR_037275	100526525		NR_037275		Mir3092	mmu-mir-3092	microRNA 3092	ncRNA
common_peak2-28005-9-26--1.56527409575925-2.17218792383888	chr4	45972259	45972783	+	0	NA	Intergenic	(GA)n|Simple_repeat|Simple_repeat	-5686	NM_001290475	100121	Mm.275413	NM_146142	ENSMUSG00000035517	Tdrd7	5730495N10Rik|AI447470|PCTAIRE2BP	tudor domain containing 7	protein-coding
unique_peak1-5457-15-2-2.4272022498345-3.53487848679804	chr5	122644012	122644618	+	0	NA	Intergenic	RLTR4_MM-int|LTR|ERV1	-15423	NM_001042489	74096	Mm.28804	NM_028752	ENSMUSG00000064267	Hvcn1	0610039P13Rik|AI450555|BTS|HV1|Vsop.|mVSOP	hydrogen voltage-gated channel 1	protein-coding
common_peak1-10737-9-14--0.717277189204299-0.53895475198017	chr14	65881527	65881999	+	0	NA	promoter-TSS (NM_021458)	promoter-TSS (NM_021458)	-463	NM_021458	14365	Mm.214687	NM_021458		Fzd3	AU020229|D930050A07Rik|Fz3	frizzled homolog 3 (Drosophila)	protein-coding
common_peak1-8474-40-56--0.173914331413643-0.351783812734557	chr10	80292144	80293305	+	0	NA	TTS (NR_027656)	TTS (NR_027656)	1182	NR_035503	100316778		NR_035503		Mir1982	mmu-mir-1982	microRNA 1982	ncRNA
common_peak2-19589-21-9-1.24756117037887-1.83731222263754	chr1	20863044	20863494	+	0	NA	Intergenic	Intergenic	17285	NR_040492	77741	Mm.159984	NR_040492	ENSMUSG00000097934	6720483E21Rik	-	RIKEN cDNA 6720483E21 gene	ncRNA
common_peak1-7873-52-29-1.20136939465718-3.95194335281	chr1	133695884	133697562	+	0	NA	intron (NM_178079, intron 2 of 12)	MTC|LTR|MaLR	2751	NM_178079	212933	Mm.23844	NM_178079	ENSMUSG00000042251	Pm20d1	4732466D17Rik|AI098026	peptidase M20 domain containing 1	protein-coding
common_peak1-13281-39-28-0.757780251791582-1.56058662248873	chr19	38003914	38005600	+	0	NA	intron (NM_001099634, intron 37 of 52)	RCHARR1|DNA|MER1_type	113310	NM_001099634	226101	Mm.34674	NM_177035	ENSMUSG00000048612	Myof	2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3	myoferlin	protein-coding
common_peak2-27021-37-26-0.771105569322351-1.52341724501298	chr2	173729906	173731083	+	0	NA	Intergenic	Lx2|LINE|L1	167422	NM_019806	56491	Mm.260456	NM_019806	ENSMUSG00000054455	Vapb	AI225786|AI840687|AI848259|D2Abb2e|R75548|VAP33b|Vamp33b	vesicle-associated membrane protein, associated protein B and C	protein-coding
unique_peak1-200-16-5-1.53330114154691-1.80287260729378	chr1	82811786	82812638	+	0	NA	Intergenic	Intergenic	-23846	NM_010472	15463	Mm.392569	NM_010472	ENSMUSG00000026159	Agfg1	AU045498|C130049H11Rik|C85612|D730048C23Rik|Hrb|RAB|Rip	ArfGAP with FG repeats 1	protein-coding
common_peak2-26546-14-8-0.729291158915332-0.771068449301682	chr2	92751045	92751455	+	0	NA	Intergenic	ORR1E|LTR|MaLR	-4008	NM_030725	80976	Mm.33490	NM_030725	ENSMUSG00000027220	Syt13	5730409J20Rik|AI549909|mKIAA1427	synaptotagmin XIII	protein-coding
common_peak2-31080-31-35-0.0553136693708112-0.313095283157747	chr8	24573743	24574917	+	0	NA	Intergenic	Intergenic	52356	NM_013834	20377	Mm.281691	NM_013834	ENSMUSG00000031548	Sfrp1	2210415K03Rik|AW011917|AW107218|AW742929|sFRP-1	secreted frizzled-related protein 1	protein-coding
common_peak2-30811-114-127-0.463954521708367-2.09491996789933	chr7	127966808	127968056	+	0	NA	Intergenic	B3|SINE|B2	-18913	NM_007908	13631	Mm.25997	NM_007908	ENSMUSG00000035064	Eef2k	C86191|eEF-2K	eukaryotic elongation factor-2 kinase	protein-coding
unique_peak2-37987-0-6--3.64748585253182-1.56314192529759	chr6	17501039	17501311	+	0	NA	intron (NM_008591, intron 15 of 21)	intron (NM_008591, intron 15 of 21)	-85923	NM_007604	12343	Mm.392504	NM_007604		Capza2	1110053K06Rik|AW208808|Cappa2	capping protein (actin filament) muscle Z-line, alpha 2	protein-coding
common_peak1-16657-24-13-0.985854980710112-1.52081014994907	chr6	115523464	115524552	+	0	NA	intron (NM_199033, intron 8 of 11)	B4A|SINE|B4	18586	NM_001101431	70291	Mm.133694	NM_001101431		Mkrn2os	2510049J12Rik	makorin, ring finger protein 2, opposite strand	protein-coding
common_peak2-27763-17-13-0.410941416147434-0.546772548767014	chr3	129878485	129879054	+	0	NA	Intergenic	Intergenic	-4994	NM_029838	77018	Mm.91728	NM_029838	ENSMUSG00000058897	Col25a1	2700062B08Rik|CLAC-P	collagen, type XXV, alpha 1	protein-coding
common_peak2-32020-46-29-0.991105347640283-2.69560598044942	chr9	75421460	75422635	+	0	NA	intron (NM_001038710, intron 9 of 9)	CYRA11_Mm|Unknown|Y-chromosome	-14583	NM_016963	50875	Mm.38445	NM_016963	ENSMUSG00000058587	Tmod3	U-Tmod|UTMOD	tropomodulin 3	protein-coding
common_peak1-18149-43-37-0.534635672080118-1.07072119362139	chr8	11346248	11347605	+	0	NA	intron (NM_009932, intron 3 of 47)	intron (NM_009932, intron 3 of 47)	34097	NM_009932	12827	Mm.181021	NM_009932	ENSMUSG00000031503	Col4a2	Col4a-2	collagen, type IV, alpha 2	protein-coding
common_peak2-24777-7-4-0.477162735410827-1.09384600808989	chr17	57011547	57011906	+	0	NA	intron (NM_001039114, intron 2 of 14)	intron (NM_001039114, intron 2 of 14)	2144	NM_001039114	328845	Mm.179421	NM_001039114	ENSMUSG00000024207	Acsbg2	Bgr	acyl-CoA synthetase bubblegum family member 2	protein-coding
common_peak2-24894-19-14-0.495796731053168-0.607095980551316	chr17	84072180	84072869	+	0	NA	Intergenic	PB1D9|SINE|Alu	-32979	NM_001171054	116871	Mm.277668	NM_054082	ENSMUSG00000055817	Mta3	1110002J22Rik|mKIAA1266	metastasis associated 3	protein-coding
common_peak2-28147-9-35--1.98031159503809-3.86499617670048	chr4	101870783	101871496	+	0	NA	Intergenic	Lx9|LINE|L1	-56208	NM_001177983	18578	Mm.20181	NM_019840	ENSMUSG00000028525	Pde4b	Dpde4|R74983|dunce	phosphodiesterase 4B, cAMP specific	protein-coding
unique_peak2-33032-3-4--0.73591118484664-0.864171920961574	chr10	69917093	69917525	+	0	NA	intron (NM_024244, intron 3 of 13)	intron (NM_024244, intron 3 of 13)	13651	NM_001143776	71721	Mm.477813	NM_024244	ENSMUSG00000043259	Fam13c	1200015N20Rik|C030038O19Rik|mKIAA1796	family with sequence similarity 13, member C	protein-coding
common_peak2-30156-17-24--0.425559851569687-0.427564438475253	chr6	146793241	146793850	+	0	NA	Intergenic	Intergenic	-5087	NM_027059	69371	Mm.252733	NM_027059	ENSMUSG00000030292	Smco2	1700023A16Rik	single-pass membrane protein with coiled-coil domains 2	protein-coding
common_peak1-14703-19-11-0.81772482594053-0.991115276827166	chr3	69200569	69201452	+	0	NA	intron (NM_178726, intron 1 of 3)	intron (NM_178726, intron 1 of 3)	80170	NM_178726	242083	Mm.40577	NM_178726		Ppm1l	3222401G13|5930404J21Rik|AI481720|AW045850|PP2C|PP2Cepsilon|Pp2ce|Ppp2ce|mKIAA4175	protein phosphatase 1 (formerly 2C)-like	protein-coding
unique_peak1-109-24-2-3.20824740204656-6.14077709290365	chr1	55226004	55227152	+	0	NA	TTS (NM_028713)	TTS (NM_028713)	38489	NM_025283	19070	Mm.291037	NM_025283	ENSMUSG00000025979	Mob4	2610109B12Rik|Mobkl3|Phocn|Prei3	MOB family member 4, phocein	protein-coding
unique_peak2-32944-10-18--0.891512168434816-0.804350088532826	chr10	40349389	40350251	+	0	NA	promoter-TSS (NM_027442)	promoter-TSS (NM_027442)	3	NM_027442	70503	Mm.252862	NM_027442	ENSMUSG00000063428	Ddo	5330420D20Rik|5730402C02Rik|AI467244	D-aspartate oxidase	protein-coding
common_peak1-7818-52-36-0.898806624636749-2.59178042653149	chr1	125678422	125680320	+	0	NA	intron (NM_199021, intron 3 of 25)	Lx5|LINE|L1	262765	NM_199021	269109	Mm.483255	NM_199021	ENSMUSG00000036815	Dpp10	6430601K09Rik|DPP X|Dprp3	dipeptidylpeptidase 10	protein-coding
unique_peak1-3114-8-3-1.00522241794757-1.39487600375387	chr18	32158162	32158616	+	0	NA	exon (NM_032394, exon 13 of 47)	exon (NM_032394, exon 13 of 47)	38196	NM_032394	17922	Mm.440013	NM_032394	ENSMUSG00000024388	Myo7b	-	myosin VIIB	protein-coding
common_peak2-32065-37-64--0.496374741542636-0.943512743618327	chr9	92249593	92251019	+	0	NA	intron (NM_001033184, intron 6 of 6)	intron (NM_001033184, intron 6 of 6)	46091	NM_001033184	78459	Mm.179195	NM_001033184	ENSMUSG00000074139	1700057G04Rik	-	RIKEN cDNA 1700057G04 gene	protein-coding
common_peak1-14601-20-11-0.903112283870037-1.11267835143409	chr3	51652300	51653154	+	0	NA	intron (NM_001004176, intron 2 of 4)	MTD|LTR|MaLR	187612	NM_174995	211666	Mm.24679	NM_174995	ENSMUSG00000074604	Mgst2	GST2|MGST-II	microsomal glutathione S-transferase 2	protein-coding
common_peak2-32034-10-9-0.0344872501214071-1.05503135781948	chr9	78021715	78022216	+	0	NA	Intergenic	Intergenic	-1756	NR_040401	320295	Mm.131285	NR_040401	ENSMUSG00000097574	C920006O11Rik	-	RIKEN cDNA C920006O11 gene	ncRNA
common_peak1-9579-8-21--1.45420920068973-1.61268301619756	chr11	118401243	118401770	+	0	NA	intron (NM_001285436, intron 3 of 13)	intron (NM_001285436, intron 3 of 13)	63232	NM_172573	217364	Mm.473963	NM_172573	ENSMUSG00000033857	Engase	C130099A03|D230014K01Rik	endo-beta-N-acetylglucosaminidase	protein-coding
common_peak2-20053-11-14--0.398197011356905-0.379391706698377	chr1	150115546	150116076	+	0	NA	Intergenic	Intergenic	1692603	NM_008869	18783	Mm.4186	NM_008869	ENSMUSG00000056220	Pla2g4a	Pla2g4|cPLA2|cPLA2alpha	phospholipase A2, group IVA (cytosolic, calcium-dependent)	protein-coding
unique_peak1-5380-12-4-1.32684789020028-2.04196296489515	chr5	99437079	99437631	+	0	NA	intron (NM_008926, intron 2 of 18)	(TA)n|Simple_repeat|Simple_repeat	28743	NM_008926	19092	Mm.263002	NM_008926	ENSMUSG00000029334	Prkg2	AW212535|CGKII|Prkgr2|cGK-II	protein kinase, cGMP-dependent, type II	protein-coding
common_peak2-28265-42-59--0.164561267741335-0.34908710939424	chr4	126967559	126968511	+	0	NA	Intergenic	ORR1B1|LTR|MaLR	23248	NM_008120	14612	Mm.24615	NM_008120	ENSMUSG00000050234	Gja4	AU020209|AW558810|Cnx37|Cx37|Gja-4	gap junction protein, alpha 4	protein-coding
unique_peak2-39506-6-10--0.894033508256995-1.21398586181642	chr9	63132977	63133294	+	0	NA	intron (NM_011840, intron 12 of 21)	intron (NM_011840, intron 12 of 21)	92524	NM_011840	23938	Mm.325746	NM_011840	ENSMUSG00000058444	Map2k5	AI324775|AI428457|MEK5|Mapkk5|Prkmk5	mitogen-activated protein kinase kinase 5	protein-coding
common_peak2-30785-37-59--0.3808975241227-0.651432082277441	chr7	126791613	126792578	+	0	NA	intron (NM_054094, intron 6 of 13)	Lx6|LINE|L1	30753	NM_054094	117147	Mm.427560	NM_054094	ENSMUSG00000033533	Acsm1	Acas3|Bucs1|Macs	acyl-CoA synthetase medium-chain family member 1	protein-coding
common_peak2-23062-22-10-1.18785248645011-1.74319850844462	chr14	70777670	70778247	+	0	NA	intron (NM_021308, intron 20 of 22)	B1F|SINE|Alu	-26727	NM_001135151	213053	Mm.270647	NM_144808	ENSMUSG00000022094	Slc39a14	FAD-123|ZIP-14|Zip14|fad123	solute carrier family 39 (zinc transporter), member 14	protein-coding
common_peak2-30984-47-51-0.234401706625456-0.495169887621104	chr8	3492802	3493691	+	0	NA	5' UTR (NM_080461, exon 1 of 2)	5' UTR (NM_080461, exon 1 of 2)	108	NM_080461	140482	Mm.299073	NM_080461	ENSMUSG00000047264	Zfp358	Zfend	zinc finger protein 358	protein-coding
unique_peak2-38155-6-10--0.894033508256995-1.21398586181642	chr6	86669480	86669950	+	0	NA	intron (NM_011818, intron 4 of 13)	intron (NM_011818, intron 4 of 13)	13657	NM_011818	23885	Mm.321452	NM_011818	ENSMUSG00000001157	Gmcl1	2810049L19Rik|Gcl|mglc-1	germ cell-less homolog 1 (Drosophila)	protein-coding
unique_peak1-4920-17-2-2.63333383748388-3.75443312462699	chr4	56842361	56843123	+	0	NA	intron (NM_018761, intron 8 of 18)	intron (NM_018761, intron 8 of 18)	-27539	NM_026079	230233	Mm.282743	NM_026079	ENSMUSG00000028431	Ikbkap	3110040G09Rik|6030413P05|C78473|Elp1|IKAP	inhibitor of kappa light polypeptide enhancer in B cells, kinase complex-associated protein	protein-coding
common_peak1-15086-51-45-0.55136186954556-1.24554587181539	chr3	127928566	127929739	+	0	NA	intron (NR_045704, intron 1 of 5)	intron (NR_045704, intron 1 of 5)	5371	NR_045704	402774	Mm.209170	NR_045704		D030025E07Rik	-	RIKEN cDNA D030025E07 gene	ncRNA
unique_peak2-33939-8-11--0.579740082773585-1.14218153353838	chr12	73964405	73965016	+	0	NA	Intergenic	L1M3|LINE|L1	54042	NM_029444	75801	Mm.242892	NM_029444	ENSMUSG00000021098	4930447C04Rik	4921504I02Rik|A930035O15Rik|Six6OS|Six6as|Six6os1	RIKEN cDNA 4930447C04 gene	protein-coding
common_peak2-24417-12-16--0.4386868561627-0.368541233333383	chr17	16951409	16952005	+	0	NA	Intergenic	(TA)n|Simple_repeat|Simple_repeat	-249360	NM_001005358	449000	Mm.483718	NM_001005358	ENSMUSG00000096696	Zfp960	-	zinc finger protein 960	protein-coding
common_peak2-25039-24-42--0.633054851934381-0.913161965438649	chr18	31609355	31610008	+	0	NA	Intergenic	Lx5|LINE|L1	-2612	NM_009308	20983	Mm.233846	NM_009308	ENSMUSG00000024261	Syt4	SytIV	synaptotagmin IV	protein-coding
unique_peak1-6282-11-3-1.50869358425161-1.95434855131066	chr7	28833587	28834126	+	0	NA	exon (NM_011874, exon 3 of 11)	exon (NM_011874, exon 3 of 11)	1255	NM_011874	23996	Mm.29582	NM_011874	ENSMUSG00000030603	Psmc4	CIP21|MIP224	proteasome (prosome, macropain) 26S subunit, ATPase, 4	protein-coding
common_peak1-18845-12-28--1.20920501003993-1.52081014994907	chr9	18292117	18292781	+	0	NA	Intergenic	L1_Mus3|LINE|L1	9610	NM_028557	73503	Mm.160088	NM_028557	ENSMUSG00000038691	Mbd3l1	1700070G05Rik|1700095H13Rik|Mbd3l	methyl-CpG binding domain protein 3-like 1	protein-coding
common_peak2-31143-17-30--0.735899972181837-0.841847921495509	chr8	39005861	39006602	+	0	NA	intron (NM_145841, intron 2 of 7)	intron (NM_145841, intron 2 of 7)	309025	NR_029884	723860		NR_029884		Mir383	Mirn383|mmu-mir-383	microRNA 383	ncRNA
common_peak1-15906-13-11-0.193509529916613-0.379391706698377	chr5	21646042	21646662	+	0	NA	intron (NM_011261, intron 6 of 63)	intron (NM_011261, intron 6 of 63)	204171	NM_011261	19699	Mm.425236	NM_011261	ENSMUSG00000042453	Reln	reeler|rl	reelin	protein-coding
common_peak2-22416-42-50-0.0699039858956887-0.334445504886124	chr13	36117249	36118264	+	0	NA	intron (NM_201358, intron 2 of 2)	intron (NM_201358, intron 2 of 2)	57981	NM_029628	76487	Mm.44745	NM_029628	ENSMUSG00000050423	Ppp1r3g	1600032L17Rik	protein phosphatase 1, regulatory (inhibitor) subunit 3G	protein-coding
unique_peak2-35998-4-7--1.02346051385325-1.09384600808989	chr19	36306285	36306707	+	0	NA	Intergenic	Intergenic	-112162	NM_013468	107765	Mm.10279	NM_013468	ENSMUSG00000024803	Ankrd1	Alrp|CARP|Crap|MARP1	ankyrin repeat domain 1 (cardiac muscle)	protein-coding
common_peak1-18104-23-17-0.551842503066768-0.713114929964887	chr8	3278778	3279706	+	0	NA	5' UTR (NM_010568, exon 1 of 21)	5' UTR (NM_010568, exon 1 of 21)	375	NM_010568	16337	Mm.268003	NM_010568	ENSMUSG00000005534	Insr	4932439J01Rik|CD220|D630014A15Rik|IR|IR-A|IR-B	insulin receptor	protein-coding
unique_peak2-36300-6-13--1.2419568116773-1.58711810488664	chr2	71873371	71873905	+	0	NA	intron (NM_019688, intron 3 of 29)	intron (NM_019688, intron 3 of 29)	-19036	NM_001204166	56508	Mm.196153	NM_019688	ENSMUSG00000049044	Rapgef4	1300003D15Rik|5730402K07Rik|6330581N18Rik|EPAC 2|Epac-2|Epac2|mKIAA4040	Rap guanine nucleotide exchange factor (GEF) 4	protein-coding
unique_peak2-38112-2-7--1.91745425626332-1.45399745587252	chr6	72467136	72467366	+	0	NA	Intergenic	Intergenic	-27134	NM_007599	12332	Mm.18626	NM_007599	ENSMUSG00000056737	Capg	gCap39|mbh1	capping protein (actin filament), gelsolin-like	protein-coding
unique_peak2-34554-5-13--1.51173525806346-1.78669045979184	chr14	63178118	63178710	+	0	NA	intron (NM_001243857, intron 1 of 3)	intron (NM_001243857, intron 1 of 3)	3840	NM_001243857	629059	Mm.291864	NM_001243857	ENSMUSG00000035184	Fam124a	EG629059	family with sequence similarity 124, member A	protein-coding
unique_peak1-2296-10-2-1.77145284428761-2.09384600808989	chr15	80743152	80743682	+	0	NA	intron (NM_177124, intron 14 of 21)	intron (NM_177124, intron 14 of 21)	-27052	NR_039573	100628612		NR_039573	miRBase:MI0018022	Mir5113	mmu-mir-5113|mu-mir-5113	microRNA 5113	ncRNA
unique_peak1-102-11-6-0.701338662194009-1.32595962126035	chr1	53713059	53713726	+	0	NA	intron (NM_001252070, intron 8 of 65)	Lx4B|LINE|L1	50236	NM_001252070	627872	Mm.184692	NM_001252070	ENSMUSG00000096141	Dnah7a	Dnahc7|Dnahc7a|Gm992	dynein, axonemal, heavy chain 7A	protein-coding
common_peak1-16136-76-97-0.147234541748073-0.452908205752178	chr5	72914048	72915581	+	0	NA	exon (NM_133921, exon 18 of 23)	exon (NM_133921, exon 18 of 23)	-19035	NM_001122756	53419	Mm.332425	NM_016869	ENSMUSG00000005220	Corin	AV273130|Lrp4	corin	protein-coding
unique_peak1-151-15-1-3.01216475055566-4.18809100057339	chr1	72083095	72083800	+	0	NA	Intergenic	Intergenic	-31678	NR_040454	71134	Mm.370574	NR_040454		4933417E11Rik	-	RIKEN cDNA 4933417E11 gene	ncRNA
common_peak1-8703-18-22--0.210642804828661-0.321718508207525	chr11	85311246	85312080	+	0	NA	intron (NM_001166643, intron 14 of 23)	intron (NM_001166643, intron 14 of 23)	144997	NM_001166643	192197	Mm.287663	NM_138681	ENSMUSG00000059439	Bcas3	1500019F07Rik|2610028P08Rik|AU021018|BC028339|K20D4|rudhira	breast carcinoma amplified sequence 3	protein-coding
common_peak1-17007-25-17-0.691924903902794-0.98872314135509	chr6	89422255	89423436	+	0	NA	intron (NM_025351, intron 4 of 7)	AT_rich|Low_complexity|Low_complexity	-110238	NM_008881	18844	Mm.3789	NM_008881	ENSMUSG00000030084	Plxna1	2600013D04Rik|NOV|PlexA1|Plxn1|mKIAA4053	plexin A1	protein-coding
common_peak2-23649-25-18-0.613922391901521-0.86528749982161	chr15	84712566	84713286	+	0	NA	Intergenic	Intergenic	-26367	NR_030731	271305	Mm.101022	NM_001081166	ENSMUSG00000016624	Phf21b	A730032D07Rik	PHD finger protein 21B	protein-coding
common_peak2-32348-10-9-0.0344872501214071-1.05503135781948	chrX	77810716	77811287	+	0	NA	Intergenic	Intergenic	-504982	NM_138751	192216	Mm.490421	NM_138751	ENSMUSG00000025666	Tmem47	3010015F07Rik|AI115536|BCMP1|Tm4sf10	transmembrane protein 47	protein-coding
common_peak1-12483-37-76--0.740793469209082-1.91948339504296	chr17	84957867	84958911	+	0	NA	intron (NM_177606, intron 4 of 29)	MTEa|LTR|MaLR	47154	NM_177606	213556	Mm.215159	NM_177606	ENSMUSG00000040852	Plekhh2	AI256725|E030001K05|mKIAA2028	pleckstrin homology domain containing, family H (with MyTH4 domain) member 2	protein-coding
common_peak2-21952-33-66--0.734751627932243-1.70008721686218	chr12	32378614	32379656	+	0	NA	intron (NM_001163126, intron 6 of 22)	intron (NM_001163126, intron 6 of 22)	19656	NM_175191	73010	Mm.441517	NM_175191	ENSMUSG00000044067	Gpr22	2900068K05Rik|AW061316	G protein-coupled receptor 22	protein-coding
unique_peak2-38307-2-8--2.08737925770563-1.65811743852845	chr6	137787954	137788218	+	0	NA	Intergenic	Intergenic	84988	NM_172733	232449	Mm.29181	NM_172733	ENSMUSG00000030225	Dera	2010002D22Rik|2500002K03Rik|DEOC	2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	protein-coding
common_peak2-22094-11-12--0.191746133889479-0.310474156842889	chr12	79936956	79937386	+	0	NA	intron (NM_019579, intron 14 of 14)	intron (NM_019579, intron 14 of 14)	25454	NM_023721	73834	Mm.491124	NM_023721	ENSMUSG00000021114	Atp6v1d	1110004P10Rik|Atp6m|VATD|Vma8	ATPase, H+ transporting, lysosomal V1 subunit D	protein-coding
common_peak1-10134-17-16-0.130833496954699-0.356936432242225	chr13	33050737	33051728	+	0	NA	Intergenic	(CAAAG)n|Simple_repeat|Simple_repeat	-6150	NM_011454	20708	Mm.36526	NM_011454	ENSMUSG00000042842	Serpinb6b	NK13|Spi12|ovalbumin	serine (or cysteine) peptidase inhibitor, clade B, member 6b	protein-coding
unique_peak1-6588-8-9--0.316705676939792-1.03275496310833	chr7	143685118	143685627	+	0	NA	Intergenic	Intergenic	-144274	NR_040459	330664	Mm.127762	NR_040459		C230079O03Rik	C230079O03	RIKEN cDNA C230079O03 gene	ncRNA
unique_peak2-39460-8-10--0.454209200689727-1.078512453669	chr9	53598456	53598907	+	0	NA	Intergenic	B3|SINE|B2	-20661	NM_028060	72022	Mm.26159	NM_028060	ENSMUSG00000042195	Slc35f2	1500009K05Rik|AU019213	solute carrier family 35, member F2	protein-coding
common_peak2-23521-34-46--0.172520324676372-0.340524918943711	chr15	76948344	76949224	+	0	NA	intron (NM_001110827, intron 3 of 13)	intron (NM_001110827, intron 3 of 13)	33956	NR_108037	74303	Mm.444304	NR_108037	ENSMUSG00000097267	1700109K24Rik	4933425G21Rik	RIKEN cDNA 1700109K24 gene	ncRNA
unique_peak1-4616-8-1-2.00522241794757-2.05605744720049	chr3	69011812	69012328	+	0	NA	Intergenic	Intergenic	-14271	NM_027843	71619	Mm.98122	NM_027843	ENSMUSG00000098207	Arl14	9130014L17Rik|Arf7	ADP-ribosylation factor-like 14	protein-coding
common_peak2-21008-8-5-0.420259917226415-1.10484139239135	chr11	28907107	28907478	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-123459	NM_027869	71701	Mm.211131	NM_027869	ENSMUSG00000020464	Pnpt1	1200003F12Rik|Old35|PNPase|Pnptl1	polyribonucleotide nucleotidyltransferase 1	protein-coding
common_peak2-23255-19-54--1.37867238686297-3.56455313593768	chr15	12823966	12825298	+	0	NA	intron (NM_001130149, intron 22 of 34)	intron (NM_001130149, intron 22 of 34)	70062	NM_001130149	14000	Mm.293142	NM_026799	ENSMUSG00000022191	Drosha	1110013A17Rik|AI874853|Etohi2|Rn3|Rnasen	drosha, ribonuclease type III	protein-coding
common_peak2-24849-9-6-0.382258484346616-1.11707584880836	chr17	75143822	75144245	+	0	NA	intron (NM_152817, intron 7 of 19)	MTB_Mm|LTR|MaLR	26943	NM_152817	74196	Mm.209503	NM_152817	ENSMUSG00000024078	Ttc27	2610511O17Rik	tetratricopeptide repeat domain 27	protein-coding
common_peak1-13504-54-49-0.52922957185501-1.25617732716373	chr2	74825378	74826536	+	0	NA	Intergenic	Intergenic	162088	NM_016804	53375	Mm.292613	NM_016804		Mtx2	1500012G02Rik	metaxin 2	protein-coding
unique_peak2-38795-5-8--0.874305337448166-1.10484139239135	chr7	130673600	130674017	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	-29845	NM_001081329	210162	Mm.135397	NM_175435	ENSMUSG00000030757	Zkscan2	9430065N20Rik|AW493225|Zfp694	zinc finger with KRAB and SCAN domains 2	protein-coding
unique_peak1-3435-7-5-0.214128329577033-1.01466476204226	chr19	6625720	6626232	+	0	NA	Intergenic	G-rich|Low_complexity|Low_complexity	-82906	NM_009203	20521	Mm.391146	NM_009203	ENSMUSG00000061742	Slc22a12	AI987855|OAT4L|Rst|Slc22al2|URAT1	solute carrier family 22 (organic anion/cation transporter), member 12	protein-coding
unique_peak2-39641-6-13--1.2419568116773-1.58711810488664	chr9	103365940	103366593	+	0	NA	intron (NM_001002896, intron 1 of 6)	PB1D10|SINE|Alu	16392	NM_001002896	107993	Mm.335403	NM_001002896	ENSMUSG00000032556	Bfsp2	AI448593|CP49	beaded filament structural protein 2, phakinin	protein-coding
common_peak1-16338-17-15-0.218296338205038-0.403453972741633	chr5	117976652	117977436	+	0	NA	intron (NM_001114545, intron 3 of 19)	intron (NM_001114545, intron 3 of 19)	113033	NM_001114545	333050	Mm.437947	NM_001034873	ENSMUSG00000061578	Ksr2	-	kinase suppressor of ras 2	protein-coding
common_peak1-9628-21-34--0.559793751678731-0.677299098039755	chr12	3309278	3310014	+	0	NA	5' UTR (NM_016676, exon 1 of 6)	5' UTR (NM_016676, exon 1 of 6)	323	NM_016676	19325	Mm.378993	NM_016676	ENSMUSG00000020671	Rab10	AW107754	RAB10, member RAS oncogene family	protein-coding
unique_peak2-39708-6-11--1.01956439034085-1.32595962126035	chr9	116173256	116173860	+	0	NA	Intergenic	Intergenic	-89077	NM_009371	21813	Mm.172346	NM_009371	ENSMUSG00000032440	Tgfbr2	1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII	transforming growth factor, beta receptor II	protein-coding
unique_peak1-5519-8-2-1.42025991722641-1.65811743852845	chr5	137922004	137922510	+	0	NA	Intergenic	PB1D10|SINE|Alu	-3965	NM_011741	22635	Mm.7984	NM_011741	ENSMUSG00000079173	Zan	-	zonadhesin	protein-coding
unique_peak2-36144-4-4--0.345388608740609-0.864171920961574	chr2	18997066	18997496	+	0	NA	Intergenic	L1Md_A|LINE|L1	77335	NR_024323	74629	Mm.117687	NR_024323	ENSMUSG00000026736	4930426L09Rik	-	RIKEN cDNA 4930426L09 gene	ncRNA
common_peak1-13432-11-11--0.0762689164695427-0.301029995663976	chr19	55244001	55244800	+	0	NA	Intergenic	RLTR13D2|LTR|ERVK	-10975	NM_009348	21684	Mm.42139	NM_009348	ENSMUSG00000024979	Tectb	Tctnb	tectorin beta	protein-coding
common_peak1-16184-14-19--0.422711934529718-0.403453972741636	chr5	92042674	92043516	+	0	NA	intron (NM_145562, intron 3 of 3)	intron (NM_145562, intron 3 of 3)	96369	NM_145562	231440	Mm.5002	NM_145562		Parm1	2210012L08Rik|9130213B05Rik|W91666	prostate androgen-regulated mucin-like protein 1	protein-coding
common_peak2-26168-68-142--0.589910557480093-2.33846836846742	chr2	19657451	19659244	+	0	NA	Intergenic	Intergenic	78658	NM_027715	71198	Mm.83981	NM_027715	ENSMUSG00000043415	Otud1	4933428L19Rik	OTU domain containing 1	protein-coding
common_peak1-7575-19-18-0.154759813218101-0.351190433797598	chr1	51289252	51289938	+	0	NA	intron (NR_045151, intron 4 of 4)	Lx|LINE|L1	-56375	NM_138741	20324	Mm.398690	NM_138741	ENSMUSG00000045954	Sdpr	-	serum deprivation response	protein-coding
common_peak1-9002-15-22--0.511397205501357-0.50761186003982	chr11	60179984	60180643	+	0	NA	intron (NM_029044, intron 5 of 13)	intron (NM_029044, intron 5 of 13)	13431	NM_029044	74665	Mm.133570	NM_029044	ENSMUSG00000056598	Lrrc48	4930449E07Rik	leucine rich repeat containing 48	protein-coding
common_peak1-13798-8-8--0.164702583494742-1.00793137938329	chr2	39325406	39325907	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-243798	NM_024209	67857	Mm.389242	NM_024209		Ppp6c	2310003C10Rik	protein phosphatase 6, catalytic subunit	protein-coding
common_peak2-26561-59-97--0.28934584324263-0.656128265330081	chr2	102400364	102401705	+	0	NA	intron (NM_173749, intron 1 of 10)	intron (NM_173749, intron 1 of 10)	10856	NM_173749	210622	Mm.28649	NM_173749	ENSMUSG00000027188	Pamr1	5930437L24|E430002G05Rik|Ramp	peptidase domain containing associated with muscle regeneration 1	protein-coding
unique_peak2-38076-3-7--1.41398308995928-1.23214870625617	chr6	50408389	50408730	+	0	NA	Intergenic	(TTTC)n|Simple_repeat|Simple_repeat	-2390	NM_001163645	71720	Mm.44153	NM_027881	ENSMUSG00000029822	Osbpl3	1200014M06Rik|6720421I08Rik|A530055M08|ORP3|OSBP3	oxysterol binding protein-like 3	protein-coding
common_peak1-9397-19-20-0.0103699038829257-0.306326795069978	chr11	100284501	100285369	+	0	NA	intron (NM_001163481, intron 9 of 9)	intron (NM_001163481, intron 9 of 9)	7927	NM_001163481	14230	Mm.3894	NM_010221	ENSMUSG00000001555	Fkbp10	AI325255|FKBP-10|FKBP-65|FKBP65|Fkbp-rs1|Fkbp1-rs|Fkbp6|Fkbprp	FK506 binding protein 10	protein-coding
common_peak2-26370-30-33-0.082212568241534-0.329362479200675	chr2	39065002	39066096	+	0	NA	intron (NM_024209, intron 2 of 6)	intron (NM_024209, intron 2 of 6)	16309	NM_024209	67857	Mm.389242	NM_024209		Ppp6c	2310003C10Rik	protein phosphatase 6, catalytic subunit	protein-coding
common_peak1-15570-83-70-0.764475505601444-3.29427863245687	chr4	126255720	126256886	+	0	NA	intron (NM_175554, intron 16 of 25)	intron (NM_175554, intron 16 of 25)	19199	NR_106067	102465673		NR_106067		Mir7119	mmu-mir-7119	microRNA mir-7119	ncRNA
common_peak1-8280-33-36-0.121884196896579-0.346766333527252	chr10	26011915	26012820	+	0	NA	intron (NM_172787, intron 18 of 21)	intron (NM_172787, intron 18 of 21)	62854	NM_001115154	268288	Mm.213322	NM_001013766	ENSMUSG00000051354	Samd3	Gm623	sterile alpha motif domain containing 3	protein-coding
common_peak1-15201-63-74-0.209493900574709-0.52921549434918	chr4	8535551	8536781	+	0	NA	Intergenic	B3|SINE|B2	73375	NM_021518	59021	Mm.397471	NM_021518	ENSMUSG00000047187	Rab2a	9330148M11Rik|C80220|Rab2	RAB2A, member RAS oncogene family	protein-coding
unique_peak2-38402-4-14--1.93035110946177-2.23384849113406	chr7	19714897	19715402	+	0	NA	intron (NM_175530, intron 1 of 1)	B2_Mm2|SINE|B2	9941	NM_175530	243867	Mm.230830	NM_175530	ENSMUSG00000050428	Fbxo46	20D7-FC4|4932704E22Rik|Fbxo34l	F-box protein 46	protein-coding
common_peak1-10478-19-21--0.0567442919756109-0.301029995663971	chr13	113617758	113618587	+	0	NA	intron (NM_008903, intron 1 of 5)	intron (NM_008903, intron 1 of 5)	27187	NM_008247	19012	Mm.317186	NM_008247	ENSMUSG00000021759	Ppap2a	Hic53|Hpic53|LPP-1|LPP1|PAP-2a|PAP2-alpha|PAP2a|mPAP	phosphatidic acid phosphatase type 2A	protein-coding
common_peak2-20862-16-14-0.211373046659543-0.364171515310935	chr11	94404270	94404840	+	0	NA	intron (NM_001013381, intron 7 of 8)	intron (NM_001013381, intron 7 of 8)	5966	NM_001013381	237926	Mm.342275	NM_001013381	ENSMUSG00000039096	Rsad1	B430319G23|BC056485	radical S-adenosyl methionine domain containing 1	protein-coding
common_peak2-31924-7-5-0.214128329577033-1.01466476204226	chr9	62814446	62814868	+	0	NA	intron (NM_019663, intron 1 of 13)	intron (NM_019663, intron 1 of 13)	14029	NM_019663	56469	Mm.431253	NM_019663	ENSMUSG00000032405	Pias1	2900068C24Rik|Ddxbp1|GBP	protein inhibitor of activated STAT 1	protein-coding
unique_peak1-3914-16-4-1.7963355473807-2.18192634393779	chr2	24454793	24455625	+	0	NA	Intergenic	RodERV21-int|LTR|ERV1	-124090	NM_011040	18510	Mm.2533	NM_011040	ENSMUSG00000026976	Pax8	Pax-8	paired box 8	protein-coding
unique_peak2-33954-1-6--2.43441193227435-1.56314192529759	chr12	78971764	78972234	+	0	NA	Intergenic	Intergenic	-355643	NM_172952	268566	Mm.341742	NM_145965	ENSMUSG00000047454	Gphn	5730552E08Rik|AI662856|BC027112|C230040D23|GPH|GPHRYN|geph	gephyrin	protein-coding
common_peak2-29849-15-7-1.01216475055566-1.08658567012551	chr6	97355186	97355590	+	0	NA	intron (NM_145148, intron 5 of 23)	intron (NM_145148, intron 5 of 23)	-152614	NM_001081157	320502	Mm.68163	NM_001081157	ENSMUSG00000044086	Lmod3	5430424A14Rik	leiomodin 3 (fetal)	protein-coding
common_peak2-31581-15-28--0.845816244571916-1.02077663956385	chr8	120264666	120265721	+	0	NA	intron (NM_008290, intron 2 of 4)	MER5A|DNA|MER1_type	39347	NM_008290	15486	Mm.276466	NM_008290	ENSMUSG00000031844	Hsd17b2	AI194836|AI194967|AI255511	hydroxysteroid (17-beta) dehydrogenase 2	protein-coding
common_peak1-14567-21-49--1.07436692450849-2.19832861281706	chr3	37420091	37420905	+	0	NA	intron (NM_001163511, intron 14 of 15)	intron (NM_001163511, intron 14 of 15)	101296	NM_021343	57815	Mm.172679	NM_021343	ENSMUSG00000027722	Spata5	2510048F20Rik|C78064|Spaf	spermatogenesis associated 5	protein-coding
common_peak1-17607-20-20-0.0957573618124323-0.321718508207528	chr7	45123589	45124431	+	0	NA	Intergenic	Intergenic	1395894	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak2-21592-17-17-0.0483713367627256-0.325169893479371	chr11	98741768	98742470	+	0	NA	intron (NM_197940, intron 1 of 7)	intron (NM_197940, intron 1 of 7)	17207	NM_197940	68524	Mm.28661	NM_197940	ENSMUSG00000038013	Wipf2	1110014J05Rik|5730509C05Rik|AA407487|Gm1176|Wich|Wire	WAS/WASL interacting protein family, member 2	protein-coding
common_peak1-10002-22-21-0.187852486450107-0.376654945067947	chr13	3679505	3680499	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	46724	NM_001267724	142688	Mm.253061	NM_178283	ENSMUSG00000033781	Asb13	2210015B19Rik|6430573K02Rik|Asb-13|C85285	ankyrin repeat and SOCS box-containing 13	protein-coding
common_peak1-13370-17-9-0.896368243317676-1.09394599973099	chr19	46152575	46153303	+	0	NA	intron (NM_001039353, intron 1 of 12)	intron (NM_001039353, intron 1 of 12)	2602	NM_001039351	70769	Mm.402190	NM_053086	ENSMUSG00000015176	Nolc1	NOPP130|NOPP140|P130	nucleolar and coiled-body phosphoprotein 1	protein-coding
common_peak2-19817-14-12-0.198776442216552-0.373562084705529	chr1	88474171	88474820	+	0	NA	intron (NM_008801, intron 1 of 4)	BC1_Mm|scRNA|scRNA	4581	NM_008801	18582	Mm.12925	NM_008801	ENSMUSG00000026239	Pde6d	AI841218|PrBP/delta	phosphodiesterase 6D, cGMP-specific, rod, delta	protein-coding
unique_peak1-2973-9-2-1.60465090568306-1.87199725847353	chr17	75082557	75083070	+	0	NA	intron (NM_007566, intron 65 of 72)	B1_Mur4|SINE|Alu	-34277	NM_152817	74196	Mm.209503	NM_152817	ENSMUSG00000024078	Ttc27	2610511O17Rik	tetratricopeptide repeat domain 27	protein-coding
common_peak2-29675-45-58--0.0222850240169699-0.301029995663982	chr6	72347144	72348072	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-6947	NM_016794	22320	Mm.1838	NM_016794	ENSMUSG00000050732	Vamp8	AU041171|Edb|endobrevin	vesicle-associated membrane protein 8	protein-coding
common_peak2-23433-9-11--0.395349094316936-0.344532117358383	chr15	62120572	62121047	+	0	NA	Intergenic	MLT1K|LTR|MaLR	-69803	NR_003523	67552	Mm.484027	NM_026230		H2afy3	4933432H23Rik	H2A histone family, member Y3	pseudo
common_peak2-26732-24-25-0.0927701846266249-0.337923771396236	chr2	131491526	131492604	+	0	NA	Intergenic	Intergenic	-104044	NM_013460	11550	Mm.389380	NM_013460		Adra1d	Adra-1|Adra1|Adra1a|Gpcr8|Spr8|[a]1d|alpha1D-AR	adrenergic receptor, alpha 1d	protein-coding
common_peak1-17177-24-17-0.623284901325404-0.890873221665474	chr6	122308868	122309599	+	0	NA	Intergenic	ORR1B1|LTR|MaLR	-18988	NM_001271579	13619	Mm.6822	NM_007905	ENSMUSG00000040669	Phc1	AW557034|Edr|Edr1|Mph1|Rae-28|rae28	polyhomeotic-like 1 (Drosophila)	protein-coding
unique_peak1-4272-6-3-0.565398110380302-1.08602067057793	chr2	133671451	133671903	+	0	NA	Intergenic	MT2B|LTR|ERVL	293782	NM_007553	12156	Mm.103205	NM_007553	ENSMUSG00000027358	Bmp2	AI467020|Bmp2a	bone morphogenetic protein 2	protein-coding
common_peak1-18289-42-29-0.835438732258665-1.96184293807029	chr8	44455068	44456714	+	0	NA	Intergenic	Intergenic	-63528	NM_009556	22702	Mm.285848	NM_009556	ENSMUSG00000051176	Zfp42	Rex-1|Rex1|Zfp-42	zinc finger protein 42	protein-coding
common_peak1-10663-22-32--0.397110014271049-0.488172498216822	chr14	49172084	49172993	+	0	NA	Intergenic	MIRc|SINE|MIR	106511	NM_172600	218989	Mm.85211	NM_172600	ENSMUSG00000036339	Tmem260	5930435P15|6720456H20Rik	transmembrane protein 260	protein-coding
common_peak1-9525-20-27--0.319280137466411-0.412012472183092	chr11	115911395	115912388	+	0	NA	intron (NM_172569, intron 5 of 15)	intron (NM_172569, intron 5 of 15)	20261	NM_172569	217331	Mm.297706	NM_172569	ENSMUSG00000020770	Unk	B230379M23Rik|Zc3h5|Zc3hdc5|mKIAA1753	unkempt homolog (Drosophila)	protein-coding
unique_peak2-36369-5-7--0.704380336005853-1.01466476204226	chr2	110017804	110018171	+	0	NA	Intergenic	Intergenic	-127351	NR_040508	75517	Mm.363927	NR_040508	ENSMUSG00000086186	Ccdc34os	1700024P03Rik	coiled-coil domain containing 34, opposite strand	ncRNA
common_peak1-11650-22-14-0.740393509478886-0.983972868822056	chr16	23167464	23168353	+	0	NA	Intergenic	Intergenic	21299	NM_009605	11450	Mm.3969	NM_009605	ENSMUSG00000022878	Adipoq	30kDa|APN|Acdc|Acrp30|GBP28|adipo|apM1	adiponectin, C1Q and collagen domain containing	protein-coding
common_peak2-22350-26-17-0.75797409071615-1.09210977391291	chr13	24564665	24565426	+	0	NA	3' UTR (NM_001111110, exon 17 of 17)	3' UTR (NM_001111110, exon 17 of 17)	58054	NM_001284520	12763	Mm.8396	NM_007717	ENSMUSG00000016756	Cmah	-	cytidine monophospho-N-acetylneuraminic acid hydroxylase	protein-coding
common_peak1-17395-11-8-0.338768582809301-1.14218153353838	chr7	3275609	3276056	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-13207	NM_001093764	50918	Mm.29874	NM_016969	ENSMUSG00000068566	Myadm	D7Wsu62e	myeloid-associated differentiation marker	protein-coding
common_peak2-25318-18-16-0.225456309978012-0.397739447719379	chr18	75405019	75405797	+	0	NA	intron (NM_027727, intron 16 of 16)	intron (NM_027727, intron 16 of 16)	51563	NR_045394	100503117	Mm.250517	NR_045393		2010010A06Rik	5033420E22Rik	RIKEN cDNA 2010010A06 gene	ncRNA
common_peak1-10475-9-8-0.0196884049619079-1.03275496310833	chr13	113045829	113046310	+	0	NA	Intergenic	Intergenic	-32590	NM_001168403	77318	Mm.159895	NM_029898	ENSMUSG00000049985	Ankrd55	C030011J08Rik	ankyrin repeat domain 55	protein-coding
common_peak2-22114-10-26--1.3984721571547-1.90052685918624	chr12	82169492	82170205	+	0	NA	intron (NM_022316, intron 1 of 12)	intron (NM_022316, intron 1 of 12)	42053	NM_022316	64075	Mm.273295	NM_022316	ENSMUSG00000021136	Smoc1	2600002F22Rik|AI848508|SRG	SPARC related modular calcium binding 1	protein-coding
unique_peak1-6502-15-3-2.01216475055566-3.03427613622886	chr7	115615742	115616324	+	0	NA	Intergenic	RLTR45|LTR|ERVK	7193	NM_146307	258304	Mm.377424	NM_146307	ENSMUSG00000096679	Olfr498	MOR204-36	olfactory receptor 498	protein-coding
common_peak2-23250-125-181-0.116030738860855-0.448136623333854	chr15	12116896	12119143	+	0	NA	Intergenic	B2_Mm2|SINE|B2	16772	NR_035443	100316684		NR_035443		Mir1898	Mirn1898|mmu-mir-1898	microRNA 1898	ncRNA
unique_peak2-33742-5-11--1.28934283672701-1.477227296591	chr11	116817030	116817624	+	0	NA	intron (NM_172948, intron 8 of 16)	MTE2a|LTR|MaLR	37150	NM_172948	268510	Mm.35141	NM_172948	ENSMUSG00000043857	Mgat5b	C330018B01|GnT-IX|mGnTVB	mannoside acetylglucosaminyltransferase 5, isoenzyme B	protein-coding
common_peak1-16525-15-33--1.07529809069468-1.60877160026698	chr5	142401269	142401978	+	0	NA	intron (NM_177879, intron 5 of 44)	L1Md_A|LINE|L1	-475828	NM_199068	17425	Mm.24214	NM_010812	ENSMUSG00000056493	Foxk1	A630048H08Rik|AI463295|ENSMUSG00000075577|Gm10868|Mnf	forkhead box K1	protein-coding
common_peak2-24142-29-43--0.347141538022187-0.479515789778906	chr16	36875093	36876081	+	0	NA	promoter-TSS (NM_134111)	promoter-TSS (NM_134111)	-675	NM_134111	106389	Mm.432078	NM_134111	ENSMUSG00000022838	Eaf2	AW048865|FESTA-L|FESTA-S|Festa|Traits|U19	ELL associated factor 2	protein-coding
common_peak1-10605-20-31--0.511925215408807-0.634510163964152	chr14	31962671	31963638	+	0	NA	intron (NM_138672, intron 34 of 68)	intron (NM_138672, intron 34 of 68)	15115	NM_027289	70021	Mm.261681	NM_027289	ENSMUSG00000071547	Nt5dc2	2510015F01Rik	5'-nucleotidase domain containing 2	protein-coding
unique_peak1-6108-12-6-0.841421063030034-1.58711810488664	chr6	126034836	126035542	+	0	NA	Intergenic	Intergenic	79789	NM_001164035	18205	Mm.267570	NM_008742	ENSMUSG00000049107	Ntf3	AI316846|AI835689|Nt3|Ntf-3	neurotrophin 3	protein-coding
common_peak2-21323-17-40--1.13925566641305-1.9602491241746	chr11	75531063	75532135	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-14790	NM_009536	22627	Mm.234700	NM_009536	ENSMUSG00000020849	Ywhae	AU019196	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide	protein-coding
common_peak2-32385-8-11--0.579740082773585-1.14218153353838	chrX	126765537	126765932	+	0	NA	intron (NM_172493, intron 23 of 26)	L1Md_F2|LINE|L1	481456	NM_172493	54004	Mm.10763	NM_017398	ENSMUSG00000034480	Diap2	Dia3|Diaph2|Drf2|E430022I22Rik	diaphanous homolog 2 (Drosophila)	protein-coding
unique_peak2-36733-5-12--1.40482005414695-1.62698961692433	chr3	57277659	57278076	+	0	NA	intron (NM_133784, intron 4 of 6)	intron (NM_133784, intron 4 of 6)	48535	NM_145539	229302	Mm.26618	NM_145539	ENSMUSG00000027801	Tm4sf4	Iltmp	transmembrane 4 superfamily member 4	protein-coding
common_peak2-20673-27-61--0.962650359491639-2.29782461879204	chr10	85916419	85917190	+	0	NA	intron (NM_001164495, intron 2 of 6)	HAL1-3A_ME|LINE|L1	44837	NM_001164495	27204	Mm.394931	NM_013722	ENSMUSG00000059602	Syn3	-	synapsin III	protein-coding
unique_peak1-7376-9-6-0.382258484346616-1.11707584880836	chrX	73471368	73471890	+	0	NA	Intergenic	Intergenic	-38016	NM_001013760	238829	Mm.292319	NM_001013760	ENSMUSG00000071738	Gm4937	EG238829	predicted gene 4937	protein-coding
common_peak1-11207-11-13--0.298661337805991-0.337263207250336	chr15	78581271	78581910	+	0	NA	Intergenic	Intergenic	22285	NM_008595	17305	Mm.149235	NM_008595	ENSMUSG00000018169	Mfng	AW546563	MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase	protein-coding
common_peak1-11822-41-9-2.3792206099613-7.57909624947352	chr16	77499557	77500881	+	0	NA	intron (NR_015543, intron 3 of 4)	intron (NR_015543, intron 3 of 4)	-98962	NR_029535	387229		NR_029535	miRBase:MI0000146	Mir99a	Mirn99a|mmu-mir-99a	microRNA 99a	ncRNA
common_peak1-14015-16-22--0.405298313788951-0.440610794044987	chr2	112239204	112240040	+	0	NA	intron (NM_024254, intron 1 of 9)	L1MB8|LINE|L1	20254	NM_024254	72425	Mm.425091	NM_024254	ENSMUSG00000027132	Katnbl1	2410042D21Rik|AA166487|AA473307|AI467442	katanin p80 subunit B like 1	protein-coding
common_peak1-15522-9-8-0.0196884049619079-1.03275496310833	chr4	117550410	117550928	+	0	NA	intron (NR_045570, intron 4 of 8)	L2b|LINE|L2	5412	NR_045570	53418	Mm.123843	NM_017377	ENSMUSG00000028541	B4galt2	Ggtb2	UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2	protein-coding
common_peak1-16325-18-17-0.142994149786039-0.353907621462753	chr5	115652185	115653027	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-16476	NM_013879	29867	Mm.38551	NM_013879	ENSMUSG00000029544	Cabp1	caldendrin	calcium binding protein 1	protein-coding
common_peak1-17604-8-12--0.695217300193522-0.475924844171029	chr7	44985730	44986319	+	0	NA	Intergenic	Intergenic	1533880	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak2-33450-2-6--1.72480917832092-1.26211192963361	chr11	63920236	63920573	+	0	NA	Intergenic	L1ME2|LINE|L1	27418	NR_033780	66456	Mm.124828	NR_033780	ENSMUSG00000087497	2810001G20Rik	AW045514	RIKEN cDNA 2810001G20 gene	ncRNA
common_peak2-29399-46-24-1.25413975347408-3.76223442633752	chr6	90996578	90997296	+	0	NA	intron (NM_018815, intron 20 of 39)	intron (NM_018815, intron 20 of 39)	69883	NM_018815	54563	Mm.28162	NM_018815	ENSMUSG00000030091	Nup210	9830001L10|AI836801|Pom210|gp190|gp210	nucleoporin 210	protein-coding
unique_peak2-37815-5-6--0.511735258063458-0.947717972411649	chr5	124478122	124478441	+	0	NA	intron (NM_177876, intron 1 of 3)	RSINE1|SINE|B4	3988	NM_177876	330192	Mm.4079	NM_177876	ENSMUSG00000066278	Vps37b	2300007F24Rik|AI415429|BC026744	vacuolar protein sorting 37B (yeast)	protein-coding
unique_peak2-37644-2-5--1.50241675698448-1.08602067057793	chr5	88946118	88946539	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	10594	NM_152839	16069	Mm.1192	NM_152839		Igj	9530090F24Rik|AI323815|Jch	immunoglobulin joining chain	protein-coding
common_peak1-10003-14-17--0.270708841084668-0.328191099940267	chr13	4713245	4713962	+	0	NA	Intergenic	Intergenic	-105193	NM_018859	56043	Mm.251908	NM_018859	ENSMUSG00000045410	Akr1e1	1810061I10Rik|Akr1e2	aldo-keto reductase family 1, member E1	protein-coding
common_peak2-22863-24-29--0.113680692840802-0.304839791830752	chr14	26969860	26970577	+	0	NA	Intergenic	B2_Mm2|SINE|B2	28123	NM_001177539	100039293	Mm.429131	NM_001177539	ENSMUSG00000072672	Duxbl3	ENSMUSG00000072672|Gm10391	double homeobox B-like 3	protein-coding
common_peak1-12964-12-9-0.326847890200276-0.459837087125828	chr19	3388786	3389246	+	0	NA	promoter-TSS (NM_001286558)	promoter-TSS (NM_001286558)	159	NM_001039657	17771	Mm.209941	NM_010841	ENSMUSG00000024905	Mtl5	tesmin	metallothionein-like 5, testis-specific (tesmin)	protein-coding
common_peak2-24943-13-19--0.543456064249594-0.466170754204149	chr18	24723115	24723753	+	0	NA	Intergenic	MERVL_2A-int|LTR|ERVL	-34729	NM_144861	225283	Mm.28427	NM_144861	ENSMUSG00000040446	Rprd1a	C77387|mKIAA4077	regulation of nuclear pre-mRNA domain containing 1A	protein-coding
unique_peak2-39952-7-15--1.20090916970181-0.947446088118041	chrX	139774588	139775415	+	0	NA	intron (NM_031258, intron 4 of 8)	intron (NM_031258, intron 4 of 8)	53804	NM_031258	83453	Mm.157697	NM_031258	ENSMUSG00000031283	Chrdl1	CHL|CHL1|Nrln1|VOPT	chordin-like 1	protein-coding
common_peak2-23074-23-24-0.0779113147343562-0.318406410381916	chr14	73524757	73525379	+	0	NA	Intergenic	Intergenic	-17249	NM_001170694	105670	Mm.280068	NM_134083	ENSMUSG00000022106	Rcbtb2	2610028E02Rik|2810420M18Rik|AI448345|AW240694|Chc1l|RC/BTB2	regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2	protein-coding
common_peak2-27412-24-23-0.208247402046561-0.407645899519042	chr3	88511384	88512448	+	0	NA	intron (NM_028814, intron 10 of 13)	B1_Mur1|SINE|Alu	-8860	NM_009069	19769	Mm.4009	NM_009069		Rit1	RIBB|ROC1|Rit	Ras-like without CAAX 1	protein-coding
unique_peak1-6211-13-2-2.19350952991661-3.03832868024006	chr7	80789432	80790009	+	0	NA	Intergenic	B1F1|SINE|Alu	41729	NR_033604	244061	Mm.484605	NR_033604		Gm4971	EG244061	Smad nuclear interacting protein 1 pseudogene	pseudo
common_peak1-11202-62-22-1.88718950274507-8.90108298319599	chr15	77889860	77892472	+	0	NA	intron (NM_007583, intron 1 of 3)	intron (NM_007583, intron 1 of 3)	58544	NM_007583	12300	Mm.277338	NM_007583		Cacng2	AW060990|B230105C07Rik|B930041E13Rik|stargazer|stargazin|stg|wag|waggler	calcium channel, voltage-dependent, gamma subunit 2	protein-coding
common_peak1-9507-13-8-0.608547029195456-0.660903317613904	chr11	113684138	113684854	+	0	NA	intron (NM_172800, intron 34 of 44)	MTD|LTR|MaLR	-71367	NM_001163346	56699	Mm.293378	NM_020006	ENSMUSG00000041598	Cdc42ep4	1500041M20Rik|Borg4|CEP4	CDC42 effector protein (Rho GTPase binding) 4	protein-coding
common_peak2-32424-17-10-0.75886471956774-0.917676348953458	chrX	165299386	165299885	+	0	NA	intron (NM_009707, intron 1 of 12)	intron (NM_009707, intron 1 of 12)	66604	NM_009707	11856	Mm.441810	NM_009707	ENSMUSG00000031355	Arhgap6	AI504284|RhoGAPX-1	Rho GTPase activating protein 6	protein-coding
unique_peak2-38437-1-6--2.43441193227435-1.56314192529759	chr7	27259552	27259824	+	0	NA	intron (NM_172896, intron 10 of 10)	intron (NM_172896, intron 10 of 10)	39556	NM_172896	243880	Mm.322356	NM_172896	ENSMUSG00000040601	Nlrp4a	E330021B02|E330028A19Rik|NALP4|Nalp-eta|Nalp-ita|Nalp4a	NLR family, pyrin domain containing 4A	protein-coding
common_peak1-8183-14-7-0.899216160357645-0.947446088118041	chr10	75677320	75677909	+	0	NA	intron (NM_001077638, intron 7 of 10)	ORR1D2-int|LTR|MaLR	-7460	NR_030443	751554		NR_030443	miRBase:MI0004635	Mir678	Mirn678|mmu-mir-678	microRNA 678	ncRNA
common_peak1-12210-10-14--0.550475250599749-0.446472590016315	chr17	33915875	33916361	+	0	NA	intron (NM_020581, intron 3 of 6)	intron (NM_020581, intron 3 of 6)	2402	NM_020581	57875	Mm.196189	NM_020581		Angptl4	Arp4|Bk89|Fiaf|Hfarp|Ng27|Pgar|Pgarg|Pp1158	angiopoietin-like 4	protein-coding
common_peak1-10109-9-17--0.980311595038092-0.844317084070804	chr13	29503609	29504163	+	0	NA	intron (NM_144536, intron 13 of 15)	intron (NM_144536, intron 13 of 15)	395762	NR_045075	77920	Mm.197051	NR_045073	ENSMUSG00000086363	A330102I10Rik	-	RIKEN cDNA A330102I10 gene	ncRNA
unique_peak1-5230-14-2-2.31425365963649-3.28500101358144	chr5	41844921	41845520	+	0	NA	Intergenic	L1Md_F2|LINE|L1	254174	NM_027295	100972	Mm.41555	NM_027295	ENSMUSG00000029128	Rab28	2700023P08Rik|AW496496	RAB28, member RAS oncogene family	protein-coding
unique_peak1-6655-11-1-2.50869358425161-2.83420869758413	chr8	14964121	14964775	+	0	NA	intron (NM_172751, intron 18 of 28)	intron (NM_172751, intron 18 of 28)	-46577	NM_029116	74901	Mm.46675	NM_029116	ENSMUSG00000055675	Kbtbd11	2900016B01Rik|4930465M17Rik|mKIAA0711	kelch repeat and BTB (POZ) domain containing 11	protein-coding
common_peak2-29340-16-9-0.796335547380699-0.844317084070804	chr5	148708959	148709569	+	0	NA	Intergenic	RSINE1|SINE|B4	-2886	NM_027872	71706	Mm.153218	NM_027872	ENSMUSG00000029650	Slc46a3	1200006F02Rik	solute carrier family 46, member 3	protein-coding
unique_peak2-35398-2-5--1.50241675698448-1.08602067057793	chr17	32006982	32007331	+	0	NA	Intergenic	Intergenic	-14419	NM_010831	17691	Mm.290941	NM_010831	ENSMUSG00000024042	Sik1	Msk|Sik|Snf1lk	salt inducible kinase 1	protein-coding
unique_peak2-36646-5-6--0.511735258063458-0.947717972411649	chr3	9716904	9717335	+	0	NA	intron (NM_001195031, intron 3 of 8)	intron (NM_001195031, intron 3 of 8)	-107034	NM_133218	170753	Mm.212908	NM_133218	ENSMUSG00000040209	Zfp704	C030026M03|C030034L19Rik|Gig1|Znf704	zinc finger protein 704	protein-coding
unique_peak2-33589-5-11--1.28934283672701-1.477227296591	chr11	87666295	87666818	+	0	NA	promoter-TSS (NM_001039684)	promoter-TSS (NM_001039684)	-171	NM_001039684	380718	Mm.24404	NM_001039684	ENSMUSG00000034121	Mks1	AK190930|B8d3	Meckel syndrome, type 1	protein-coding
common_peak2-25817-11-11--0.0762689164695427-0.301029995663976	chr19	38038512	38039124	+	0	NA	intron (NM_001099634, intron 18 of 52)	intron (NM_001099634, intron 18 of 52)	79249	NM_001099634	226101	Mm.34674	NM_177035	ENSMUSG00000048612	Myof	2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3	myoferlin	protein-coding
unique_peak2-33202-0-6--3.64748585253182-1.56314192529759	chr10	111620389	111620726	+	0	NA	intron (NM_178278, intron 7 of 16)	B4|SINE|B4	17825	NM_178278	353025	Mm.194428	NM_178278	ENSMUSG00000035694	Caps2	D630005B03Rik	calcyphosphine 2	protein-coding
common_peak1-15196-16-17--0.0516613591742505-0.301029995663984	chr3	159495263	159495978	+	0	NA	Intergenic	RSINE1|SINE|B4	-7039	NR_037590	68151	Mm.6766	NM_026582		Wls	5031439A09Rik|AI173978|AI987742|Gpr177	wntless homolog (Drosophila)	protein-coding
common_peak2-20782-12-11-0.0638134843664826-0.337263207250336	chr10	120227065	120227697	+	0	NA	intron (NM_177092, intron 6 of 6)	ORR1A2|LTR|MaLR	24593	NR_038003	70874	Mm.427286	NR_038000	ENSMUSG00000044544	4921513I03Rik	-	RIKEN cDNA 4921513I03 gene	ncRNA
common_peak1-15248-9-7-0.18961340640422-1.05908390183068	chr4	11486064	11486436	+	0	NA	intron (NM_001039556, intron 1 of 14)	CpG	183	NM_001256145	623474	Mm.491200	NM_177285	ENSMUSG00000078773	Rad54b	E130016E03Rik	RAD54 homolog B (S. cerevisiae)	protein-coding
common_peak2-26481-20-10-1.0286431659539-1.30248952876293	chr2	79618741	79619355	+	0	NA	intron (NM_001290743, intron 4 of 4)	intron (NM_001290743, intron 4 of 4)	71111	NM_001290743	75276	Mm.257373	NM_172420	ENSMUSG00000034683	Ppp1r1c	4930565M23Rik|4930579P15Rik	protein phosphatase 1, regulatory (inhibitor) subunit 1C	protein-coding
common_peak2-29760-11-16--0.578769256998726-0.503257505534083	chr6	87009807	87010381	+	0	NA	intron (NM_013528, intron 7 of 18)	intron (NM_013528, intron 7 of 18)	17254	NM_013528	14583	Mm.19893	NM_013528	ENSMUSG00000029992	Gfpt1	2810423A18Rik|AI324119|AI449986|GFA|GFAT|GFAT1|GFAT1m|Gfpt	glutamine fructose-6-phosphate transaminase 1	protein-coding
common_peak1-12697-8-8--0.164702583494742-1.00793137938329	chr18	42054984	42055487	+	0	NA	intron (NM_029942, intron 5 of 6)	intron (NM_029942, intron 5 of 6)	55613	NM_029942	77619	Mm.30649	NM_029942	ENSMUSG00000056671	Prelid2	1700003A01Rik|C330008K14Rik	PRELI domain containing 2	protein-coding
unique_peak2-35555-6-8--0.60452689106201-1.03789460276074	chr17	65646967	65647386	+	0	NA	intron (NM_001289485, intron 14 of 15)	intron (NM_001289485, intron 14 of 15)	242946	NM_001008973	381107	Mm.141275	NM_001008973	ENSMUSG00000045036	Tmem232	E130009J12Rik|Gm940|Tes13-L|Tes13-S	transmembrane protein 232	protein-coding
unique_peak2-39733-6-12--1.13504160776079-1.45089835786865	chr9	122310637	122311152	+	0	NA	Intergenic	IAPLTR1_Mm|LTR|ERVK	-2975	NR_045967	654800	Mm.393956	NR_045967		A730085K08Rik	-	RIKEN cDNA A730085K08 gene	ncRNA
common_peak2-22931-25-20-0.469532482566345-0.662033714151238	chr14	46966554	46967231	+	0	NA	Intergenic	MIR|SINE|MIR	-32307	NR_037981	100041724	Mm.383311	NM_001099324	ENSMUSG00000079261	Gm15217	OTTMUSG00000019524	predicted gene 15217	ncRNA
common_peak1-11100-112-77-1.14784808145803-8.51528842321265	chr15	61530889	61534382	+	0	NA	intron (NR_040350, intron 4 of 4)	L1MDa|LINE|L1	73371	NR_040350	432956	Mm.404918	NR_040350		D030024E09Rik	-	RIKEN cDNA D030024E09 gene	ncRNA
common_peak1-11899-36-55--0.328033835889849-0.518540604135986	chr17	12991621	12992562	+	0	NA	intron (NR_027784, intron 2 of 2)	B1F1|SINE|Alu	-29519	NM_010515	16004	Mm.26553	NM_010515	ENSMUSG00000023830	Igf2r	AI661837|CD222|CI-MPR|M6P/IGF2R|Mpr300	insulin-like growth factor 2 receptor	protein-coding
common_peak2-30674-54-71-0.00316076018742173-0.302548520215158	chr7	104218731	104220015	+	0	NA	Intergenic	L1Md_T|LINE|L1	-10888	NM_001162477	14389	Mm.42033	NM_010248	ENSMUSG00000004508	Gab2	AI463667|D130058I17Rik|p97	growth factor receptor bound protein 2-associated protein 2	protein-coding
common_peak1-15675-15-21--0.447266868081641-0.448200956659578	chr4	137387712	137388426	+	0	NA	Intergenic	B4A|SINE|B4	-30083	NM_199307	230857	Mm.401062	NM_199307	ENSMUSG00000057530	Ece1	AW322500|ECE-1|ECE-1a|ECE-1b|ECE-1d	endothelin converting enzyme 1	protein-coding
common_peak2-27781-22-30--0.30691220529947-0.399869693390336	chr3	135211990	135212832	+	0	NA	intron (NM_027288, intron 11 of 16)	intron (NM_027288, intron 11 of 16)	63836	NM_027288	110173	Mm.280536	NM_027288	ENSMUSG00000028164	Manba	2410030O07Rik|B930014J03Rik|Bmn	mannosidase, beta A, lysosomal	protein-coding
common_peak1-8916-19-10-0.943255708024389-1.16735254179725	chr11	51615046	51615857	+	0	NA	Intergenic	B2_Mm2|SINE|B2	38286	NM_025535	66397	Mm.196592	NM_025535	ENSMUSG00000020386	Sar1b	2310075M17Rik|2900019I22Rik|CMRD|Sara1b|Sara2|Sarb	SAR1 gene homolog B (S. cerevisiae)	protein-coding
common_peak2-31078-11-9-0.186765489364251-0.344532117358383	chr8	24570183	24570644	+	0	NA	Intergenic	Intergenic	48439	NM_013834	20377	Mm.281691	NM_013834	ENSMUSG00000031548	Sfrp1	2210415K03Rik|AW011917|AW107218|AW742929|sFRP-1	secreted frizzled-related protein 1	protein-coding
common_peak1-17506-23-12-1.02132778636799-1.44787515926925	chr7	25831390	25832509	+	0	NA	intron (NM_008168, intron 11 of 19)	B4|SINE|B4	25439	NM_008168	14809	Mm.2879	NM_008168	ENSMUSG00000003378	Grik5	GluK5|GluRgamma2|KA2	glutamate receptor, ionotropic, kainate 5 (gamma 2)	protein-coding
common_peak2-32005-26-15-0.927899092158462-1.40782320807777	chr9	71692877	71693880	+	0	NA	3' UTR (NM_001253864, exon 13 of 13)	3' UTR (NM_001253864, exon 13 of 13)	50525	NM_001253864	21406	Mm.171615	NM_011544	ENSMUSG00000032228	Tcf12	A130037E08Rik|ALF1|HEB|HEBAlt|HTF-4|HTF4|ME1|REB|bHLHb20	transcription factor 12	protein-coding
common_peak1-10118-27-50--0.680879391076259-1.16605326768361	chr13	30544675	30545524	+	0	NA	Intergenic	Intergenic	92086	NM_025710	66694	Mm.181933	NM_025710	ENSMUSG00000038462	Uqcrfs1	4430402G14Rik|AI875505	ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1	protein-coding
unique_peak1-4083-11-1-2.50869358425161-2.83420869758413	chr2	71536880	71537421	+	0	NA	Intergenic	Intergenic	-20324	NR_037979	381371	Mm.330284	NM_201366	ENSMUSG00000064263	Gm1631	-	predicted gene 1631	ncRNA
unique_peak1-3301-7-6--0.00826409175941478-0.97990265578305	chr18	76060570	76060923	+	0	NA	intron (NM_145356, intron 2 of 4)	intron (NM_145356, intron 2 of 4)	80914	NM_145356	207259	Mm.159332	NM_145356	ENSMUSG00000044646	Zbtb7c	B230208J24Rik|Kr-pok|Zbtb36	zinc finger and BTB domain containing 7C	protein-coding
common_peak1-16134-24-44--0.698643193561958-1.07959258339368	chr5	72647709	72648602	+	0	NA	intron (NR_003966, intron 10 of 22)	intron (NR_003966, intron 10 of 22)	53573	NM_153389	231287	Mm.32775	NM_153389	ENSMUSG00000046808	Atp10d	9830145H18Rik|ATPVD|D5Buc24e	ATPase, class V, type 10D	protein-coding
unique_peak1-3146-14-5-1.31425365963649-1.4372489031793	chr18	36527947	36528648	+	0	NA	intron (NM_001081365, intron 2 of 2)	intron (NM_001081365, intron 2 of 2)	20019	NM_001081365	66060	Mm.272527	NM_001081365		Cystm1	0610010O12Rik	cysteine-rich transmembrane module containing 1	protein-coding
common_peak2-24664-13-27--1.02888289141984-1.21173582416604	chr17	35979880	35980968	+	0	NA	intron (NM_001010833, intron 1 of 15)	ID4|SINE|ID	1981	NM_001010833	240087	Mm.218511	NM_001010833	ENSMUSG00000061607	Mdc1	6820401C03|AA413496|Nfbd1|mKIAA0170	mediator of DNA damage checkpoint 1	protein-coding
unique_peak2-38508-4-5--0.608423014574403-0.909929411522249	chr7	44359440	44359804	+	0	NA	Intergenic	Intergenic	2160282	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak2-23536-15-12-0.311725032414564-0.425539671739611	chr15	77889878	77890620	+	0	NA	intron (NM_007583, intron 1 of 3)	intron (NM_007583, intron 1 of 3)	59461	NM_007583	12300	Mm.277338	NM_007583		Cacng2	AW060990|B230105C07Rik|B930041E13Rik|stargazer|stargazin|stg|wag|waggler	calcium channel, voltage-dependent, gamma subunit 2	protein-coding
common_peak2-22608-8-10--0.454209200689727-1.078512453669	chr13	74494038	74494531	+	0	NA	exon (NM_024201, exon 3 of 3)	exon (NM_024201, exon 3 of 3)	6519	NM_001168658	67433	Mm.101586	NM_024201		Ccdc127	0610011N22Rik|5430420E17Rik|A430066A18|AI256405|AW050060|C130002N06	coiled-coil domain containing 127	protein-coding
unique_peak1-6688-8-5-0.420259917226415-1.10484139239135	chr8	26844236	26844764	+	0	NA	intron (NM_028102, intron 15 of 17)	B3|SINE|B2	13980	NR_121643	71910	Mm.385055	NM_028000	ENSMUSG00000031570	Ppapdc1b	1810019D05Rik|2310022A04Rik|AW045471|Ppapdc1	phosphatidic acid phosphatase type 2 domain containing 1B	protein-coding
common_peak1-11455-42-98--0.887027292212426-3.10678241728852	chr15	101316158	101318173	+	0	NA	intron (NM_001201323, intron 7 of 8)	intron (NM_001201323, intron 7 of 8)	4778	NM_001201323	100126226	Mm.347934	NM_001201323	ENSMUSG00000067613	5430421N21Rik	-	RIKEN cDNA 5430421N21 gene	protein-coding
common_peak2-21158-7-6--0.00826409175941478-0.97990265578305	chr11	58307408	58307794	+	0	NA	Intergenic	(CCAA)n|Simple_repeat|Simple_repeat	-1600	NM_001011770	257932	Mm.340097	NM_001011770	ENSMUSG00000050813	Olfr332	MOR284-2	olfactory receptor 332	protein-coding
unique_peak2-36583-0-7--3.84013093047421-1.80617997398389	chr2	175434403	175434828	+	0	NA	Intergenic	RLTR45|LTR|ERVK	-29819	NR_040256	626877	Mm.490744	NR_040256		Gm14405	OTTMUSG00000016573	predicted gene 14405	pseudo
common_peak1-12137-30-31-0.169675409491873-0.382130460680153	chr17	27556758	27557689	+	0	NA	Intergenic	Intergenic	62181	NR_106077	102466228		NR_106077		Mir7218	mmu-mir-7218	microRNA mir-7218	ncRNA
common_peak1-18425-22-26--0.107603397076064-0.30528805757448	chr8	77548682	77549742	+	0	NA	intron (NM_178017, intron 9 of 10)	intron (NM_178017, intron 9 of 10)	-8373	NM_001136259	21968	Mm.290868	NM_011622	ENSMUSG00000042870	Tom1	-	target of myb1 homolog (chicken)	protein-coding
common_peak1-8768-14-28--0.958764834769927-1.16796998271031	chr11	6414892	6415467	+	0	NA	exon (NM_178440, exon 10 of 22)	exon (NM_178440, exon 10 of 22)	5782	NM_178440	246177	Mm.239554	NM_178440	ENSMUSG00000020437	Myo1g	E430002D17Rik	myosin IG	protein-coding
unique_peak1-1890-11-1-2.50869358425161-2.83420869758413	chr14	64632230	64632890	+	0	NA	intron (NM_146246, intron 1 of 3)	intron (NM_146246, intron 1 of 3)	21292	NM_146246	271209	Mm.300655	NM_146246	ENSMUSG00000046049	Rp1l1	BC031365|BE983540|Dcdc4|Rp1hl1	retinitis pigmentosa 1 homolog (human)-like 1	protein-coding
unique_peak1-2969-8-6-0.197867495889966-1.03789460276074	chr17	72956759	72957242	+	0	NA	Intergenic	Intergenic	-3353	NM_007439	11682	Mm.311854	NM_007439	ENSMUSG00000055471	Alk	CD246|Tcrz	anaplastic lymphoma kinase	protein-coding
unique_peak2-34087-3-9--1.73591118484664-1.57096726280955	chr13	9150109	9150550	+	0	NA	exon (NM_172585, exon 11 of 18)	exon (NM_172585, exon 11 of 18)	57178	NM_172585	217980	Mm.234944	NM_172585	ENSMUSG00000033499	Larp4b	A630096F19|AI256361|D13Wsu64e|Larp5	La ribonucleoprotein domain family, member 4B	protein-coding
common_peak2-24069-54-92--0.366073049478297-0.831978063576816	chr16	30501746	30503297	+	0	NA	Intergenic	Intergenic	48143	NM_172614	224090	Mm.241459	NM_172614		Tmem44	1700007N03Rik|9330161C17Rik|B230220N21	transmembrane protein 44	protein-coding
common_peak2-27420-55-71-0.0346948697103899-0.31450906201653	chr3	88770699	88771939	+	0	NA	intron (NM_138679, intron 1 of 26)	RMER13B|LTR|ERVK	1585	NM_138679	192195	Mm.130752	NM_138679	ENSMUSG00000028053	Ash1l	8030453L17Rik|Ash1|E430018P19Rik|Kmt2h	ash1 (absent, small, or homeotic)-like (Drosophila)	protein-coding
common_peak2-24682-14-47--1.68574634036351-4.06657318675301	chr17	43016483	43017793	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	-3765	NM_009847	12488	Mm.218637	NM_009847	ENSMUSG00000061665	Cd2ap	AL024079|C78928|METS-1|Mets1	CD2-associated protein	protein-coding
unique_peak1-4479-18-8-1.14299414978604-1.45476480588849	chr3	57638052	57638961	+	0	NA	3' UTR (NM_001113413, exon 10 of 10)	3' UTR (NM_001113413, exon 10 of 10)	13173	NM_019410	18645	Mm.271744	NM_019410	ENSMUSG00000027805	Pfn2	Pfn	profilin 2	protein-coding
common_peak2-25936-168-131-1.09328878129104-12.5718351477594	chr19	46968932	46971633	+	0	NA	intron (NM_029810, intron 9 of 17)	B1_Mus2|SINE|Alu	66559	NM_029810	76952	Mm.40965	NM_029810	ENSMUSG00000025041	Nt5c2	2010002I23Rik|CnII|ENSMUSG00000025039|Gm9751|Gmp|Nt5b|Pnt5|cN-II	5'-nucleotidase, cytosolic II	protein-coding
common_peak2-23090-21-23--0.0154732354549205-0.305650498375555	chr14	76506017	76507065	+	0	NA	intron (NM_026177, intron 2 of 7)	PB1D9|SINE|Alu	4081	NM_026177	67467	Mm.260767	NM_026177	ENSMUSG00000022008	Gpalpp1	1200011I18Rik|Kiaa1704	GPALPP motifs containing 1	protein-coding
unique_peak2-35071-6-10--0.894033508256995-1.21398586181642	chr16	15251054	15251539	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	343315	NM_001159351	70620	Mm.235407	NM_023585		Ube2v2	1110021H13Rik|4632410D19Rik|5730524P06Rik|6820402M05|AI848315|C81524|MMS2	ubiquitin-conjugating enzyme E2 variant 2	protein-coding
common_peak2-24298-119-168-0.13755848484786-0.499860658061788	chr17	25755499	25757992	+	0	NA	intron (NM_029624, intron 4 of 10)	intron (NM_029624, intron 4 of 10)	40626	NR_045520	76483	Mm.12787	NM_029624	ENSMUSG00000002279	Lmf1	2400010G15Rik|AW822050|Tmem112|cld	lipase maturation factor 1	protein-coding
common_peak2-19586-24-48--0.821499941347492-1.45748092439676	chr1	16664936	16665887	+	0	NA	intron (NM_026392, intron 2 of 2)	MTD|LTR|MaLR	10139	NM_026392	70397	Mm.194225	NM_026392	ENSMUSG00000025940	Tmem70	1110020A09Rik|2210416J16Rik	transmembrane protein 70	protein-coding
common_peak2-28040-12-8-0.478850983645327-0.562038191119709	chr4	57299906	57300316	+	0	NA	intron (NM_011207, intron 1 of 25)	intron (NM_011207, intron 1 of 25)	14598	NM_011207	545622	Mm.246552	NM_011207	ENSMUSG00000038764	Ptpn3	9530011I20Rik|PTP-H1|PTPCL	protein tyrosine phosphatase, non-receptor type 3	protein-coding
common_peak1-10783-10-8-0.186490343566457-1.078512453669	chr14	74732993	74733571	+	0	NA	Intergenic	Intergenic	-22052	NR_046059	74425	Mm.399498	NR_046059		4933402J15Rik	-	RIKEN cDNA 4933402J15 gene	ncRNA
common_peak1-12330-19-13-0.595332404604082-0.713635438203849	chr17	50634065	50635145	+	0	NA	Intergenic	Intergenic	-14267	NM_013880	224860	Mm.217362	NM_013880	ENSMUSG00000038910	Plcl2	PLC-L2|PRIP-2|Plce2|mKIAA1092	phospholipase C-like 2	protein-coding
common_peak1-13250-16-14-0.211373046659543-0.364171515310935	chr19	32197620	32198484	+	0	NA	3' UTR (NM_001168526, exon 6 of 6)	3' UTR (NM_001168526, exon 6 of 6)	-20422	NM_018830	54447	Mm.491229	NM_018830	ENSMUSG00000024887	Asah2	AI585898	N-acylsphingosine amidohydrolase 2	protein-coding
unique_peak2-34689-9-12--0.510826311736872-0.394412252720706	chr15	25563384	25564148	+	0	NA	intron (NM_019472, intron 1 of 40)	intron (NM_019472, intron 1 of 40)	11461	NM_019472	17909	Mm.60590	NM_019472	ENSMUSG00000022272	Myo10	AW048724|D15Ertd600e|mKIAA0799	myosin X	protein-coding
unique_peak2-33941-9-11--0.395349094316936-0.344532117358383	chr12	74316473	74317128	+	0	NA	intron (NM_008612, intron 6 of 7)	intron (NM_008612, intron 6 of 7)	70898	NM_029580	76357	Mm.311344	NM_029580	ENSMUSG00000034442	Trmt5	2610027O18Rik|mKIAA1393	TRM5 tRNA methyltransferase 5	protein-coding
common_peak2-24076-14-7-0.899216160357645-0.947446088118041	chr16	30790403	30790867	+	0	NA	Intergenic	Intergenic	190826	NM_177632	224093	Mm.28244	NM_177632	ENSMUSG00000046546	Fam43a	Tuf1	family with sequence similarity 43, member A	protein-coding
common_peak1-14208-20-11-0.903112283870037-1.11267835143409	chr2	150218037	150218903	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-29969	NM_027017	69277	Mm.272470	NM_027017	ENSMUSG00000063364	3300002I08Rik	2900016H11Rik	RIKEN cDNA 3300002I08 gene	protein-coding
common_peak1-13166-27-27-0.184191028837632-0.393151991482004	chr19	11120915	11121995	+	0	NA	TTS (NR_102366)	TTS (NR_102366)	3601	NR_102366	107350	Mm.6381	NM_001177351	ENSMUSG00000075010	AW112010	-	expressed sequence AW112010	ncRNA
common_peak2-31226-15-14-0.105274154947137-0.330004445983672	chr8	69901276	69901774	+	0	NA	Intergenic	RLTR12B|LTR|ERVK	-113132	NM_008673	17960	Mm.14125	NM_008673	ENSMUSG00000025588	Nat1	Nat-1	N-acetyl transferase 1	protein-coding
common_peak1-13529-14-13-0.0918612383000403-0.332077462497413	chr2	155073917	155074610	+	0	NA	intron (NM_001291108, intron 3 of 3)	MamRep137|DNA|TcMar?	11919	NM_001291108	67068	Mm.23693	NM_025947	ENSMUSG00000047459	Dynlrb1	2010012N15Rik|2010320M17Rik|9430076K19Rik|AV124457|DNLC2A|Dncl2a|km23-1	dynein light chain roadblock-type 1	protein-coding
common_peak1-14497-19-24--0.241168863113038-0.344491671143527	chr3	14533781	14534467	+	0	NA	intron (NM_028915, intron 1 of 18)	intron (NM_028915, intron 1 of 18)	336	NM_028915	71710	Mm.257449	NM_028915	ENSMUSG00000027550	Lrrcc1	1200008A14Rik|4932441F23Rik|AI195358|AI447421	leucine rich repeat and coiled-coil domain containing 1	protein-coding
common_peak2-31026-21-28--0.288491729861336-0.367910579842127	chr8	12758830	12760018	+	0	NA	intron (NR_121603, intron 1 of 29)	B1_Mur1|SINE|Alu	2408	NM_001293667	50770	Mm.257837	NM_015804	ENSMUSG00000031441	Atp11a	4930558F19Rik|AU040868|Atpc1h|Ih	ATPase, class VI, type 11A	protein-coding
unique_peak2-33949-6-9--0.75652998450706-1.11707584880836	chr12	76961578	76962002	+	0	NA	intron (NM_001005510, intron 2 of 115)	intron (NM_001005510, intron 2 of 115)	42485	NM_001005510	319565	Mm.26652	NM_001005510	ENSMUSG00000063450	Syne2	6820443O06Rik|AW546258|D12Ertd777e|NUA|Nesp2g|mKIAA1011	spectrin repeat containing, nuclear envelope 2	protein-coding
unique_peak2-33844-4-9--1.34538860874061-1.36011389749466	chr12	16591880	16592210	+	0	NA	intron (NM_001130412, intron 1 of 20)	intron (NM_001130412, intron 1 of 20)	4531	NM_015763	14245	Mm.153625	NM_015763	ENSMUSG00000020593	Lpin1	4631420P06|Kiaa0188|Lipin1|fld|mKIAA0188	lipin 1	protein-coding
common_peak2-31218-13-19--0.543456064249594-0.466170754204149	chr8	69395093	69395550	+	0	NA	intron (NM_001163564, intron 2 of 7)	intron (NM_001163564, intron 2 of 7)	11205	NM_001163564	234344	Mm.334561	NM_001163564	ENSMUSG00000014907	Naf1	Gm174	nuclear assembly factor 1 homolog (S. cerevisiae)	protein-coding
common_peak2-25357-16-12-0.417823924126969-0.489164546851866	chr18	80554230	80554821	+	0	NA	intron (NM_001190373, intron 1 of 3)	intron (NM_001190373, intron 1 of 3)	6468	NM_001190373	240444	Mm.279568	NM_001190373	ENSMUSG00000059852	Kcng2	AA591524	potassium voltage-gated channel, subfamily G, member 2	protein-coding
unique_peak1-6980-7-1-1.79909083029819-1.80617997398389	chr8	119799891	119800383	+	0	NA	intron (NM_001163262, intron 1 of 20)	intron (NM_001163262, intron 1 of 20)	19218	NM_001163262	74440	Mm.233181	NM_028941	ENSMUSG00000034390	Cmip	4933407C03Rik|5830471E12Rik|AI314065|AI464126	c-Maf inducing protein	protein-coding
unique_peak2-35847-4-9--1.34538860874061-1.36011389749466	chr18	74064152	74064631	+	0	NA	Intergenic	Intergenic	45350	NM_027741	71263	Mm.126220	NM_027741	ENSMUSG00000064036	Mro	4930507C04Rik|4933435E20Rik	maestro	protein-coding
common_peak2-23209-53-76--0.125813528278973-0.33796692268184	chr15	102202847	102204396	+	0	NA	Intergenic	Intergenic	-6919	NM_130458	170574	Mm.263284	NM_130458		Sp7	6430578P22Rik|C22|Osx	Sp7 transcription factor 7	protein-coding
common_peak1-18882-106-189--0.232088753325229-0.75247393886654	chr9	31279671	31281562	+	0	NA	Intergenic	Lx5|LINE|L1	-8793	NM_144936	235135	Mm.390134	NM_144936	ENSMUSG00000041737	Tmem45b	BC018222	transmembrane protein 45b	protein-coding
unique_peak2-37105-3-10--1.87341470859657-1.75805390616669	chr4	106839602	106840241	+	0	NA	intron (NM_025617, intron 2 of 4)	(CA)n|Simple_repeat|Simple_repeat	11050	NM_025617	66526	Mm.246956	NM_025617	ENSMUSG00000028619	Tceanc2	2210010B22Rik|2210012G02Rik|6330404A07Rik|AU015593|Tdeanc2	transcription elongation factor A (SII) N-terminal and central domain containing 2	protein-coding
common_peak1-11846-33-35-0.161412561083217-0.373466121463208	chr16	90197781	90198935	+	0	NA	Intergenic	PB1D10|SINE|Alu	-22629	NM_011434	20655	Mm.276325	NM_011434	ENSMUSG00000022982	Sod1	B430204E11Rik|Cu/Zn-SOD|CuZnSOD|Ipo-1|Ipo1|SODC|Sod-1	superoxide dismutase 1, soluble	protein-coding
common_peak1-16353-46-58-0.01535289388696-0.308391271559897	chr5	121452297	121453653	+	0	NA	intron (NM_011286, intron 2 of 21)	intron (NM_011286, intron 2 of 21)	6552	NM_011286	19894	Mm.181166	NM_011286	ENSMUSG00000029608	Rph3a	2900002P20Rik|AU022689|AW108370	rabphilin 3A	protein-coding
unique_peak1-1833-12-0-3.64877598508764-4.21441993929574	chr14	40989481	40990148	+	0	NA	Intergenic	Intergenic	520863	NR_045936	73591	Mm.65499	NR_045936		1700109I08Rik	-	RIKEN cDNA 1700109I08 gene	ncRNA
common_peak2-31907-63-77-0.152910372208341-0.433519020835319	chr9	59035588	59037425	+	0	NA	Intergenic	Intergenic	-102873	NM_028121	72141	Mm.22456	NM_028121	ENSMUSG00000025236	Adpgk	2610017G09Rik|Adp-gk|C77577	ADP-dependent glucokinase	protein-coding
unique_peak1-2578-11-2-1.92373108353046-2.32232533660526	chr16	30053875	30054455	+	0	NA	Intergenic	Intergenic	-11278	NM_008235	15205	Mm.390859	NM_008235	ENSMUSG00000022528	Hes1	Hry|bHLHb39	hairy and enhancer of split 1 (Drosophila)	protein-coding
common_peak1-9170-16-16-0.0308008010177225-0.307611222530525	chr11	78177596	78178538	+	0	NA	intron (NM_008238, intron 6 of 8)	intron (NM_008238, intron 6 of 8)	21043	NM_011676	22248	Mm.284811	NM_011676	ENSMUSG00000002058	Unc119	D11Bhm52|HRG4|MRG4|Rg4|Rtg4|Unc119h	unc-119 homolog (C. elegans)	protein-coding
common_peak1-10146-11-23--1.07626891646954-1.24082643394777	chr13	34709140	34709771	+	0	NA	Intergenic	L1Md_T|LINE|L1	35095	NM_025831	66895	Mm.28943	NM_025831	ENSMUSG00000021411	Pxdc1	1300014I06Rik	PX domain containing 1	protein-coding
common_peak1-8532-9-9--0.132314688483142-1.03275496310833	chr10	88826442	88826852	+	0	NA	Intergenic	MTD|LTR|MaLR	80065	NM_001284344	237436	Mm.11982	NM_001033331	ENSMUSG00000074802	Gas2l3	8430435B07Rik|Gm240	growth arrest-specific 2 like 3	protein-coding
common_peak2-31702-15-14-0.105274154947137-0.330004445983672	chr9	67043179	67043936	+	0	NA	Intergenic	Intergenic	40976	NR_029576	387185		NR_029576		Mir190a	Mir190|Mirn190|mir-190|mmu-mir-190|mmu-mir-190a	microRNA 190a	ncRNA
unique_peak1-2554-7-1-1.79909083029819-1.80617997398389	chr16	24081814	24082294	+	0	NA	Intergenic	Intergenic	-93356	NM_009744	12053	Mm.347398	NM_009744	ENSMUSG00000022508	Bcl6	Bcl5	B cell leukemia/lymphoma 6	protein-coding
unique_peak2-39569-2-8--2.08737925770563-1.65811743852845	chr9	71760582	71760949	+	0	NA	intron (NM_001253865, intron 3 of 14)	intron (NM_001253865, intron 3 of 14)	-16862	NM_001253863	21406	Mm.171615	NM_011544	ENSMUSG00000032228	Tcf12	A130037E08Rik|ALF1|HEB|HEBAlt|HTF-4|HTF4|ME1|REB|bHLHb20	transcription factor 12	protein-coding
unique_peak2-39768-10-20--1.03590207776999-1.03889213727317	chrX	7375356	7376136	+	0	NA	intron (NM_207670, intron 5 of 24)	intron (NM_207670, intron 5 of 24)	8627	NM_207670	54645	Mm.194811	NM_207670	ENSMUSG00000031153	Gripap1	AI854681|DXImx47e|GRASP-1|Sfc10|mKIAA1167	GRIP1 associated protein 1	protein-coding
common_peak2-22875-8-7-0.00522241794757061-1.00793137938329	chr14	31001032	31001404	+	0	NA	intron (NM_001083616, intron 4 of 46)	L1VL4|LINE|L1	165399	NM_175343	218865	Mm.259916	NM_172264	ENSMUSG00000015970	Chdh	AU041472|D630034H06Rik	choline dehydrogenase	protein-coding
unique_peak1-463-12-3-1.64877598508764-2.36932189928148	chr1	171093851	171094335	+	0	NA	Intergenic	Intergenic	367502	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
common_peak2-21362-10-5-0.771452844287613-1.33892459842472	chr11	78177966	78178363	+	0	NA	intron (NM_008238, intron 6 of 8)	intron (NM_008238, intron 6 of 8)	21140	NM_011676	22248	Mm.284811	NM_011676	ENSMUSG00000002058	Unc119	D11Bhm52|HRG4|MRG4|Rg4|Rtg4|Unc119h	unc-119 homolog (C. elegans)	protein-coding
common_peak2-31398-42-60--0.188408009695703-0.369634502458893	chr8	88697023	88697785	+	0	NA	Intergenic	Intergenic	332503	NM_199446	102093	Mm.237296	NM_199446	ENSMUSG00000036879	Phkb	AI463271	phosphorylase kinase beta	protein-coding
unique_peak2-36977-2-8--2.08737925770563-1.65811743852845	chr3	116423204	116423622	+	0	NA	Intergenic	Intergenic	-8215	NM_144902	229782	Mm.190758	NM_144902	ENSMUSG00000027957	Slc35a3	2310050P13Rik	solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member 3	protein-coding
common_peak2-22031-14-12-0.198776442216552-0.373562084705529	chr12	65172642	65173103	+	0	NA	Intergenic	L1_Mus1|LINE|L1	403013	NM_001163271	623046	Mm.189552	NM_001163271	ENSMUSG00000043060	Fscb	EG623046	fibrous sheath CABYR binding protein	protein-coding
unique_peak2-35919-7-11--0.785871670422967-1.21681515183528	chr19	5851749	5852365	+	0	NA	3' UTR (NM_026169, exon 11 of 11)	3' UTR (NM_026169, exon 11 of 11)	-6579	NR_003513	66961	Mm.281895	NR_003513		Neat1	2310043N10Rik|VINC	nuclear paraspeckle assembly transcript 1 (non-protein coding)	ncRNA
unique_peak2-33528-1-13--3.43441193227435-3.36932189928148	chr11	76549386	76549982	+	0	NA	intron (NM_016810, intron 7 of 8)	intron (NM_016810, intron 7 of 8)	27373	NM_016810	53334	Mm.20931	NM_016810	ENSMUSG00000010392	Gosr1	AI414660|AI426320|BB145494|GOS-28|GOSRI|GS28	golgi SNAP receptor complex member 1	protein-coding
unique_peak1-5395-16-6-1.31090872021046-1.49151883326344	chr5	104025038	104025815	+	0	NA	intron (NM_011204, intron 47 of 47)	intron (NM_011204, intron 47 of 47)	32996	NM_029415	75750	Mm.7446	NM_029415	ENSMUSG00000029321	Slc10a6	8430417G17Rik|C78479|Soat	solute carrier family 10 (sodium/bile acid cotransporter family), member 6	protein-coding
unique_peak1-605-11-4-1.18676548936425-1.68134727924692	chr10	20124673	20125207	+	0	NA	intron (NM_013875, intron 12 of 12)	(TC)n|Simple_repeat|Simple_repeat	57315	NM_027930	71804	Mm.262151	NM_027930	ENSMUSG00000019992	Mtfr2	2610016C23Rik|4933412C16Rik|Dufd1|Fam54a	mitochondrial fission regulator 2	protein-coding
unique_peak1-8-17-6-1.41094141614743-1.84350559086818	chr1	86359495	86360099	+	0	NA	Intergenic	Intergenic	-1092656	NM_001037909	620078	Mm.386456	NM_175219	ENSMUSG00000052477	C130026I21Rik	4930565N07Rik|OTTMUSG00000029174	RIKEN cDNA C130026I21 gene	protein-coding
common_peak2-31183-10-26--1.3984721571547-1.90052685918624	chr8	47713332	47713931	+	0	NA	intron (NM_001284409, intron 1 of 6)	intron (NM_001284409, intron 1 of 6)	10986	NM_009810	12367	Mm.34405	NM_009810		Casp3	A830040C14Rik|AC-3|Apopain|CASP-3|CC3|CPP-32|CPP32|Caspase-3|Lice|SCA-1|Yama|mldy	caspase 3	protein-coding
common_peak2-29228-14-15--0.100783839642355-0.301029995663982	chr5	138186692	138187472	+	0	NA	promoter-TSS (NM_023910)	promoter-TSS (NM_023910)	-115	NM_029805	78829	Mm.286399	NM_023910	ENSMUSG00000029723	Tsc22d4	0610009M14Rik|1700023B23Rik|AI415410|Thg-1pit|Tilz2	TSC22 domain family, member 4	protein-coding
common_peak2-20846-50-84--0.368450619658749-0.771200261870372	chr11	59162364	59164016	+	0	NA	Intergenic	Intergenic	25965	NM_001045521	216797	Mm.339586	NM_001045521	ENSMUSG00000049291	Prss38	Gm249|Mpn2	protease, serine 38	protein-coding
common_peak1-9557-10-16--0.73104749624157-0.604422558181019	chr11	117536665	117537190	+	0	NA	intron (NM_198022, intron 1 of 21)	intron (NM_198022, intron 1 of 21)	21324	NM_198022	217351	Mm.40272	NM_198022	ENSMUSG00000025571	Tnrc6c	9930033H14Rik|mKIAA1582	trinucleotide repeat containing 6C	protein-coding
common_peak1-7743-25-25-0.161410187204014-0.36542888694933	chr1	90234308	90235379	+	0	NA	intron (NM_134252, intron 10 of 26)	intron (NM_134252, intron 10 of 26)	31556	NM_134252	171382	Mm.218753	NM_134252	ENSMUSG00000036251	Trpm8	CMR1|LTRPC6|LTrpC-6|TRPP8|Trp-p8	transient receptor potential cation channel, subfamily M, member 8	protein-coding
common_peak2-20795-16-17--0.0516613591742505-0.301029995663984	chr10	121904569	121905240	+	0	NA	Intergenic	Lx2|LINE|L1	19349	NM_016847	54140	Mm.4351	NM_016847	ENSMUSG00000020123	Avpr1a	AVPR|Avpr1|V1a|V1aR	arginine vasopressin receptor 1A	protein-coding
unique_peak2-33088-1-4--1.94898510510411-1.10720996964787	chr10	80161976	80162377	+	0	NA	intron (NM_172457, intron 1 of 3)	B2_Mm2|SINE|B2	2389	NM_172457	208228	Mm.49309	NM_172457	ENSMUSG00000003348	Mob3a	5330417K06Rik|A630029F06|AV218468|Mobkl2a	MOB kinase activator 3A	protein-coding
common_peak1-8148-40-51--0.0414640353899935-0.301029995663982	chr1	191395616	191397096	+	0	NA	Intergenic	Intergenic	115609	NM_001081363	108000	Mm.129746	NM_001081363	ENSMUSG00000026605	Cenpf	6530404A22Rik|AI325968|CENF|Lek1|PRO1779|mitosin	centromere protein F	protein-coding
common_peak1-10680-10-22--1.16714661104824-1.30248952876293	chr14	54464044	54464628	+	0	NA	Intergenic	Intergenic	178721	NM_001205242	100568452	Mm.213248	NM_001205242		A430107P09Rik	Va10	RIKEN cDNA A430107P09 gene	protein-coding
common_peak1-15628-27-14-1.08465535528672-1.87214134458703	chr4	133659681	133660533	+	0	NA	intron (NR_045571, intron 1 of 13)	B2_Mm2|SINE|B2	1609	NM_026257	67586	Mm.282029	NM_026257	ENSMUSG00000012126	Ubxn11	4930506L07Rik|D4Bwg1540e|Soc|Soci|Ubxd5	UBX domain protein 11	protein-coding
common_peak1-9312-41-48-0.0864388607334519-0.335782825099843	chr11	94327537	94328639	+	0	NA	intron (NM_001177890, intron 1 of 34)	MIRc|SINE|MIR	7424	NM_001177888	12291	Mm.29585	NM_009783	ENSMUSG00000020866	Cacna1g	Cav3.1d|[a]1G|a1G|alpha-1G|mKIAA1123	calcium channel, voltage-dependent, T type, alpha 1G subunit	protein-coding
common_peak2-20468-24-31--0.206790097232283-0.334168439396943	chr10	43901221	43902169	+	0	NA	intron (NR_001582, intron 2 of 6)	intron (NR_001582, intron 2 of 6)	11442	NR_001582	70365	Mm.87073	NR_001582		Speer5-ps1	1700007C10Rik|SPEER-5|Speer5-ps	spermatogenesis associated glutamate (E)-rich protein 5, pseudogene 1	pseudo
common_peak2-23666-26-31--0.0721009078415378-0.304589945962371	chr15	85634771	85635657	+	0	NA	3' UTR (NM_001113418, exon 8 of 8)	3' UTR (NM_001113418, exon 8 of 8)	6913	NM_001164626	72355	Mm.33706	NM_197998	ENSMUSG00000064284	Cdpf1	2210021J22Rik	cysteine rich, DPF motif domain containing 1	protein-coding
common_peak2-29503-9-10--0.269818212233077-1.05503135781948	chr6	34176441	34176967	+	0	NA	Intergenic	Intergenic	-49650	NM_021435	58246	Mm.245527	NM_021435		Slc35b4	4930474D06Rik|AB041549|AW494345	solute carrier family 35, member B4	protein-coding
unique_peak2-37232-11-16--0.578769256998726-0.503257505534083	chr4	88941875	88942558	+	0	NA	Intergenic	Intergenic	-1693	NM_009877	12578	Mm.4733	NM_009877	ENSMUSG00000044303	Cdkn2a	ARF-INK4a|Arf|INK4a-ARF|Ink4a/Arf|MTS1|Pctr1|p16|p16(INK4a)|p16INK4a|p19<ARF>|p19ARF	cyclin-dependent kinase inhibitor 2A	protein-coding
common_peak1-10786-51-46-0.520334973924935-1.1534274303752	chr14	75834099	75835618	+	0	NA	Intergenic	Intergenic	-20931	NM_001128093	380918	Mm.484360	NM_001128093	ENSMUSG00000091722	Siah3	Gm912	seven in absentia homolog 3 (Drosophila)	protein-coding
unique_peak1-1148-6-1-1.5653981103803-1.56314192529759	chr11	97883843	97884360	+	0	NA	promoter-TSS (NM_031173)	promoter-TSS (NM_031173)	-160	NM_001282978	12295	Mm.41252	NM_031173	ENSMUSG00000020882	Cacnb1	CAB1|Cchb1|Cchlb1	calcium channel, voltage-dependent, beta 1 subunit	protein-coding
common_peak1-16084-17-18--0.0296311752385474-0.306899554715732	chr5	64230305	64231054	+	0	NA	intron (NM_029554, intron 1 of 3)	intron (NM_029554, intron 1 of 3)	26945	NM_029554	76261	Mm.38143	NM_029554	ENSMUSG00000060512	0610040J01Rik	AI662686	RIKEN cDNA 0610040J01 gene	protein-coding
common_peak2-26551-13-9-0.456543935750406-0.53895475198017	chr2	94161491	94161973	+	0	NA	intron (NM_183106, intron 22 of 24)	intron (NM_183106, intron 22 of 24)	-60176	NR_030431	735259		NR_030431	miRBase:MI0004295	Mir670	Mirn670|mmu-mir-670	microRNA 670	ncRNA
common_peak2-19763-13-18--0.469455482805817-0.409888142029227	chr1	79746192	79747018	+	0	NA	intron (NM_027057, intron 1 of 4)	intron (NM_027057, intron 1 of 4)	11739	NM_001111279	69368	Mm.293273	NM_027057	ENSMUSG00000073643	Wdfy1	1700013B03Rik|1700120F24Rik|FENS-1|Jr1|WDF1|ZFYVE17|mKIAA1435	WD repeat and FYVE domain containing 1	protein-coding
common_peak2-27411-26-24-0.284042902383738-0.446094173747083	chr3	88510009	88510950	+	0	NA	intron (NM_028814, intron 10 of 13)	intron (NM_028814, intron 10 of 13)	-10297	NM_009069	19769	Mm.4009	NM_009069		Rit1	RIBB|ROC1|Rit	Ras-like without CAAX 1	protein-coding
common_peak1-13323-14-16--0.188246680892695-0.308035960714963	chr19	42676840	42677649	+	0	NA	intron (NM_001164311, intron 9 of 14)	intron (NM_001164311, intron 9 of 14)	10052	NM_001164311	67573	Mm.178767	NM_053083	ENSMUSG00000025185	Loxl4	4833426I20Rik|Loxc	lysyl oxidase-like 4	protein-coding
unique_peak1-3037-6-3-0.565398110380302-1.08602067057793	chr18	82509611	82510034	+	0	NA	Intergenic	MTB-int|LTR|MaLR	66347	NM_008082	14427	Mm.6219	NM_008082	ENSMUSG00000024553	Galr1	Galnr1	galanin receptor 1	protein-coding
common_peak1-12019-13-23--0.806490470083387-0.781208772652439	chr17	15499729	15500403	+	0	NA	Intergenic	Intergenic	-8641	NR_033511	100038481	Mm.387544	NR_033511		Gm10510	ENSMUSG00000073453	predicted gene 10510	ncRNA
unique_peak2-33300-16-36--1.09118972336089-1.81352036806615	chr11	3451721	3452965	+	0	NA	Intergenic	MER44B|DNA|MER2_type	-13048	NM_001284428	29856	Mm.188516	NM_013870	ENSMUSG00000020439	Smtn	smsmo	smoothelin	protein-coding
common_peak2-28328-18-7-1.31291915122835-1.71830443967823	chr4	133897466	133897913	+	0	NA	Intergenic	Intergenic	-1272	NM_001039677	230810	Mm.358876	NM_001039677	ENSMUSG00000028836	Slc30a2	6030430C21|ZnT-2|Znt2	solute carrier family 30 (zinc transporter), member 2	protein-coding
unique_peak1-2207-10-1-2.35641534500877-2.57096726280955	chr15	67295263	67295694	+	0	NA	Intergenic	RLTR11A2|LTR|ERVK	237147	NR_045140	69334	Mm.63770	NR_045140		1700012I11Rik	-	RIKEN cDNA 1700012I11 gene	ncRNA
common_peak2-25726-7-6--0.00826409175941478-0.97990265578305	chr19	24042884	24043234	+	0	NA	Intergenic	Intergenic	62450	NM_001114174	381217	Mm.426078	NM_001114174	ENSMUSG00000071604	Fam189a2	AI414343|AI666772|Gm967	family with sequence similarity 189, member A2	protein-coding
unique_peak2-34923-9-7-0.18961340640422-1.05908390183068	chr15	85419207	85419796	+	0	NA	intron (NR_040433, intron 3 of 4)	intron (NR_040433, intron 3 of 4)	-7250	NM_009528	22422	Mm.306946	NM_009528	ENSMUSG00000022382	Wnt7b	Wnt-7b	wingless-type MMTV integration site family, member 7B	protein-coding
unique_peak1-2536-12-4-1.32684789020028-2.04196296489515	chr16	21310741	21311348	+	0	NA	Intergenic	Intergenic	-14099	NR_046162	328646	Mm.404748	NR_046162	ENSMUSG00000096918	Gm16863	A830060N17	predicted gene, 16863	ncRNA
unique_peak1-7078-9-8-0.0196884049619079-1.03275496310833	chr9	21592199	21592700	+	0	NA	intron (NM_145611, intron 3 of 11)	RSINE1|SINE|B4	10541	NM_145611	235041	Mm.257371	NM_145611	ENSMUSG00000032194	Kank2	AI504612|Ankrd25|BC010245	KN motif and ankyrin repeat domains 2	protein-coding
common_peak1-18348-48-79--0.351000943652548-0.693339305075799	chr8	69624938	69625908	+	0	NA	Intergenic	Intergenic	241307	NM_001163564	234344	Mm.334561	NM_001163564	ENSMUSG00000014907	Naf1	Gm174	nuclear assembly factor 1 homolog (S. cerevisiae)	protein-coding
common_peak1-10215-20-15-0.488074784591193-0.590343908676236	chr13	49216035	49216915	+	0	NA	intron (NM_029361, intron 2 of 27)	B1_Mus1|SINE|Alu	27222	NM_029361	75607	Mm.342723	NM_029361	ENSMUSG00000037989	Wnk2	1810073P09Rik|AW122246|ESTM15|X83337|mKIAA1760	WNK lysine deficient protein kinase 2	protein-coding
common_peak2-22391-38-53--0.183434842864938-0.354801288549198	chr13	32924130	32925032	+	0	NA	Intergenic	Intergenic	18473	NM_025429	66222	Mm.20144	NM_025429	ENSMUSG00000044734	Serpinb1a	1190005M04Rik|AI325983|EI|EIA|ELANH2|LEI|M/NEI|MNEI|PI2	serine (or cysteine) peptidase inhibitor, clade B, member 1a	protein-coding
unique_peak1-299-8-2-1.42025991722641-1.65811743852845	chr1	125691176	125691663	+	0	NA	intron (NM_199021, intron 3 of 25)	intron (NM_199021, intron 3 of 25)	250717	NM_199021	269109	Mm.483255	NM_199021	ENSMUSG00000036815	Dpp10	6430601K09Rik|DPP X|Dprp3	dipeptidylpeptidase 10	protein-coding
common_peak2-28314-86-88-0.499902363065956-1.77406540505694	chr4	133352834	133354573	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-44177	NM_001080819	93760	Mm.22478	NM_001080819	ENSMUSG00000007880	Arid1a	1110030E03Rik|BAF250a|Osa1|Smarcf1	AT rich interactive domain 1A (SWI-like)	protein-coding
common_peak1-18200-51-75--0.173003687841012-0.398951012888126	chr8	22859224	22860474	+	0	NA	Intergenic	Intergenic	14840	NM_007852	13240	Mm.426552	NM_007852		Defa6	Defcr6	defensin, alpha, 6	protein-coding
common_peak1-8372-12-24--0.995080204687086-1.0220094258199	chr10	60830657	60831306	+	0	NA	intron (NM_013753, intron 1 of 19)	B2_Mm2|SINE|B2	15290	NM_013753	27355	Mm.269699	NM_013753	ENSMUSG00000020092	Pald1	MMPAL|Pald|mKIAA1274	phosphatase domain containing, paladin 1	protein-coding
unique_peak2-35018-6-19--1.75652998450706-1.84350559086818	chr15	102135828	102136390	+	0	NA	exon (NM_001014976, exon 9 of 31)	exon (NM_001014976, exon 9 of 31)	9385	NM_001014976	105988	Mm.288324	NM_001014976	ENSMUSG00000058290	Espl1	AL024103|AU045071|Cerp|ESP1|PRCE|SSE	extra spindle pole bodies 1 (S. cerevisiae)	protein-coding
unique_peak2-37388-3-9--1.73591118484664-1.57096726280955	chr4	140624823	140625349	+	0	NA	intron (NM_025383, intron 6 of 7)	intron (NM_025383, intron 6 of 7)	-8626	NM_001145958	230872	Mm.80685	NM_172122	ENSMUSG00000040860	Crocc	-	ciliary rootlet coiled-coil, rootletin	protein-coding
unique_peak1-3357-8-2-1.42025991722641-1.65811743852845	chr19	37895865	37896343	+	0	NA	Intergenic	Intergenic	123806	NM_007811	13082	Mm.42230	NM_007811	ENSMUSG00000024987	Cyp26a1	Cyp26|P450RA|P450RAI|RAH	cytochrome P450, family 26, subfamily a, polypeptide 1	protein-coding
common_peak1-18983-13-15--0.221527969362231-0.308519316180257	chr9	56928013	56928641	+	0	NA	intron (NM_001110350, intron 1 of 20)	ID_B1|SINE|B4	4144	NM_011378	20466	Mm.15755	NM_011378	ENSMUSG00000042557	Sin3a	AW553200|Sin3|mKIAA4126|mSin3A	transcriptional regulator, SIN3A (yeast)	protein-coding
common_peak2-29625-52-88--0.367473440700699-0.801556296744837	chr6	54816635	54817924	+	0	NA	intron (NM_199143, intron 2 of 4)	intron (NM_199143, intron 2 of 4)	50369	NM_199143	387524	Mm.286149	NM_199143		Znrf2	1190002C14Rik|AU044205|D6Ertd365e	zinc and ring finger 2	protein-coding
unique_peak1-3427-12-5-1.06381348436648-1.78669045979184	chr19	6334139	6334839	+	0	NA	promoter-TSS (NM_008583)	promoter-TSS (NM_008583)	-490	NM_001168488	17283	Mm.12917	NM_008583	ENSMUSG00000024947	Men1	AW045611	multiple endocrine neoplasia 1	protein-coding
unique_peak2-35288-0-4--3.16205902536157-1.10720996964787	chr17	6919071	6919363	+	0	NA	intron (NM_031395, intron 8 of 14)	intron (NM_031395, intron 8 of 14)	9038	NM_183368	83672	Mm.442201	NM_031395	ENSMUSG00000041831	Sytl3	A430092N21|Slp3|Slp3-a|Slp3-b|mFLJ00307	synaptotagmin-like 3	protein-coding
common_peak1-10754-35-20-1.03905283568374-2.16720861012098	chr14	69911168	69913076	+	0	NA	5' UTR (NM_173420, exon 1 of 3)	5' UTR (NM_173420, exon 1 of 3)	234	NM_173420	239167	Mm.259889	NM_173420		Synb	D930020E02Rik|syncytin-B	syncytin b	protein-coding
unique_peak2-37155-4-12--1.72390023199434-1.85743853830261	chr4	40947633	40948185	+	0	NA	intron (NM_001290448, intron 11 of 15)	intron (NM_001290448, intron 11 of 15)	7181	NR_037277	100526501		NR_037277		Mir3094	mmu-mir-3094	microRNA 3094	ncRNA
unique_peak1-817-8-2-1.42025991722641-1.65811743852845	chr11	4847882	4848393	+	0	NA	promoter-TSS (NM_010904)	promoter-TSS (NM_010904)	-70	NM_010904	380684	Mm.298283	NM_010904	ENSMUSG00000020396	Nefh	NF-H|NF200|Nfh|mKIAA0845	neurofilament, heavy polypeptide	protein-coding
unique_peak2-36350-12-10-0.189344366450341-0.386243247519795	chr2	92810292	92810902	+	0	NA	Intergenic	Intergenic	55339	NM_030725	80976	Mm.33490	NM_030725	ENSMUSG00000027220	Syt13	5730409J20Rik|AI549909|mKIAA1427	synaptotagmin XIII	protein-coding
common_peak2-24193-17-9-0.896368243317676-1.09394599973099	chr16	57421148	57421631	+	0	NA	intron (NM_001040397, intron 1 of 4)	intron (NM_001040397, intron 1 of 4)	67999	NM_001040397	78749	Mm.328360	NM_001040397	ENSMUSG00000043336	Filip1l	4631422O05Rik|Doc1	filamin A interacting protein 1-like	protein-coding
unique_peak2-37864-5-11--1.28934283672701-1.477227296591	chr5	137425048	137425815	+	0	NA	Intergenic	MTE2a|LTR|MaLR	-3714	NM_001163243	66437	Mm.25849	NM_025562	ENSMUSG00000019054	Fis1	2010003O14Rik|Ttc11	fission 1 (mitochondrial outer membrane) homolog (yeast)	protein-coding
unique_peak2-39328-10-11--0.228547155712387-0.31137425193576	chr8	126766927	126767485	+	0	NA	intron (NM_139272, intron 1 of 15)	intron (NM_139272, intron 1 of 15)	11912	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
common_peak2-24519-19-42--1.02357742804041-1.85054049304327	chr17	26611337	26612599	+	0	NA	Intergenic	B4A|SINE|B4	33449	NM_013642	19252	Mm.239041	NM_013642	ENSMUSG00000024190	Dusp1	3CH134|MKP1|Ptpn16|U19515|erp|mkp-1	dual specificity phosphatase 1	protein-coding
common_peak1-11992-10-8-0.186490343566457-1.078512453669	chr17	12792382	12792896	+	0	NA	intron (NM_013667, intron 3 of 10)	MTE2b|LTR|MaLR	15584	NM_013667	20518	Mm.17322	NM_013667	ENSMUSG00000040966	Slc22a2	Oct2|Orct2	solute carrier family 22 (organic cation transporter), member 2	protein-coding
common_peak1-14183-58-92--0.243208876217534-0.515844704882417	chr2	144270104	144271304	+	0	NA	Intergenic	(CCA)n|Simple_repeat|Simple_repeat	-14312	NR_033459	668917	Mm.152805	NR_033459	ENSMUSG00000083674	Zfp133-ps	OTTMUSG00000003825|Zfp133	zinc finger protein 133, pseudogene	pseudo
common_peak2-25999-26-12-1.22745937401737-2.03163221100073	chr19	55462152	55462572	+	0	NA	intron (NM_001293685, intron 5 of 8)	intron (NM_001293685, intron 5 of 8)	71815	NM_001293686	53611	Mm.258637	NM_016862	ENSMUSG00000024983	Vti1a	1110014F16Rik|1110018K19Rik|4921537J05Rik|MVti1|MVti1a|Vti1|Vti1-rp2	vesicle transport through interaction with t-SNAREs 1A	protein-coding
common_peak2-23623-20-22--0.03548717146582-0.301029995663994	chr15	83155741	83156575	+	0	NA	intron (NM_025445, intron 7 of 15)	intron (NM_025445, intron 7 of 15)	24519	NM_025445	66251	Mm.258910	NM_025445	ENSMUSG00000054277	Arfgap3	0610009H19Rik|1810004P07Rik|1810035F16Rik|9130416J18Rik|Arfgap1	ADP-ribosylation factor GTPase activating protein 3	protein-coding
common_peak2-31285-26-30--0.0262972182284127-0.301029995663988	chr8	72239974	72240735	+	0	NA	promoter-TSS (NM_181274)	promoter-TSS (NM_181274)	31	NM_181274	66869	Mm.334581	NM_181274		Zfp869	1200003I07Rik	zinc finger protein 869	protein-coding
unique_peak1-5531-6-5--0.0195643903408542-0.947717972411649	chr5	139793045	139793485	+	0	NA	intron (NM_172723, intron 1 of 10)	intron (NM_172723, intron 1 of 10)	8153	NM_172723	231821	Mm.297819	NM_172723	ENSMUSG00000056413	Adap1	4930431P11Rik|Centa1|GC1L|p42IP4	ArfGAP with dual PH domains 1	protein-coding
common_peak2-28946-9-8-0.0196884049619079-1.03275496310833	chr5	99252995	99253472	+	0	NA	Intergenic	Intergenic	-30225	NM_173404	110075	Mm.209571	NM_173404	ENSMUSG00000029335	Bmp3	9130206H07|9530029I04Rik	bone morphogenetic protein 3	protein-coding
common_peak1-17933-10-17--0.813509656433543-0.699649909729472	chr7	127244551	127245066	+	0	NA	Intergenic	ORR1A1|LTR|MaLR	-1132	NM_145586	233806	Mm.257952	NM_145586	ENSMUSG00000030917	Tmem159	8430420C20Rik	transmembrane protein 159	protein-coding
unique_peak1-3422-11-4-1.18676548936425-1.68134727924692	chr19	6130610	6131216	+	0	NA	Intergenic	ORR1A2|LTR|MaLR	-2698	NM_026912	69024	Mm.329629	NM_026912	ENSMUSG00000024787	Snx15	1500032B08Rik|E130013C21Rik	sorting nexin 15	protein-coding
unique_peak1-1858-10-1-2.35641534500877-2.57096726280955	chr14	54120307	54120762	+	0	NA	Intergenic	L1_Mus4|LINE|L1	-165081	NM_001205242	100568452	Mm.213248	NM_001205242		A430107P09Rik	Va10	RIKEN cDNA A430107P09 gene	protein-coding
common_peak1-19311-34-44--0.109784569328409-0.311130777923626	chr9	122865322	122866344	+	0	NA	intron (NM_010620, intron 1 of 34)	RLTR22_Mur|LTR|ERVK	5634	NM_010620	209737	Mm.278920	NM_010620	ENSMUSG00000036768	Kif15	3110023M17Rik|3930402I10Rik|D330038N01|HKLP2|Knsl7|b2b1117.1Clo	kinesin family member 15	protein-coding
unique_peak1-1204-18-5-1.7279566505072-2.39372960542229	chr11	105028588	105029410	+	0	NA	Intergenic	Intergenic	-11122	NM_001294331	24086	Mm.126976	NM_011903	ENSMUSG00000020694	Tlk2	4933403M19Rik|PKU-alpha|PKUalpha|Tlk	tousled-like kinase 2 (Arabidopsis)	protein-coding
common_peak2-23378-16-15-0.118263642268062-0.328191099940264	chr15	56764847	56765704	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-239174	NM_008216	15117	Mm.5148	NM_008216	ENSMUSG00000022367	Has2	-	hyaluronan synthase 2	protein-coding
common_peak2-26109-28-38--0.232443099040786-0.377553616161376	chr2	4558716	4560031	+	0	NA	intron (NM_026045, intron 5 of 9)	intron (NM_026045, intron 5 of 9)	13759	NM_026045	67229	Mm.38529	NM_026045	ENSMUSG00000039449	Prpf18	2810441A10Rik	PRP18 pre-mRNA processing factor 18 homolog (yeast)	protein-coding
unique_peak2-33886-5-10--1.16381195464315-1.33892459842472	chr12	35534704	35535007	+	0	NA	intron (NM_001271386, intron 2 of 27)	intron (NM_001271386, intron 2 of 27)	66912	NM_001271386	79221	Mm.310551	NM_024124	ENSMUSG00000004698	Hdac9	AV022454|D030072B18Rik|HD7B|HD9|HDRP|Hdac7b|Mitr|mKIAA0744	histone deacetylase 9	protein-coding
common_peak2-28581-47-35-0.764916423324236-1.84937269552405	chr5	13398980	13400143	+	0	NA	5' UTR (NM_009152, exon 1 of 17)	5' UTR (NM_009152, exon 1 of 17)	252	NM_009152	20346	Mm.372039	NM_009152	ENSMUSG00000028883	Sema3a	Hsema-I|SEMA1|SemD|Semad|coll-1	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A	protein-coding
unique_peak2-35115-6-16--1.52206473087004-1.32521814697968	chr16	25060957	25061635	+	0	NA	intron (NR_040374, intron 1 of 2)	intron (NR_040374, intron 1 of 2)	1571	NR_040374	319487	Mm.137341	NR_040374	ENSMUSG00000096960	A230028O05Rik	-	RIKEN cDNA A230028O05 gene	ncRNA
common_peak2-30874-34-80--0.957781475883358-2.91445928041772	chr7	140941479	140942623	+	0	NA	intron (NM_001286032, intron 1 of 10)	intron (NM_001286032, intron 1 of 10)	9901	NM_001286030	101437	Mm.199223	NM_133941	ENSMUSG00000030986	Dhx32	3110079L04Rik|4732469F02Rik|AA408140|Ddx32	DEAH (Asp-Glu-Ala-His) box polypeptide 32	protein-coding
unique_peak2-33630-2-6--1.72480917832092-1.26211192963361	chr11	98057347	98057738	+	0	NA	Intergenic	RMER15|LTR|ERVL	-2935	NM_001080118	19014	Mm.12926	NM_013634	ENSMUSG00000018160	Med1	AI480703|CRSP210|DRIP205|PBP|Pparbp|TRAP220|l11Jus15	mediator complex subunit 1	protein-coding
unique_peak2-37838-9-25--1.51082631173687-2.00244947055753	chr5	134932054	134932914	+	0	NA	promoter-TSS (NM_001081465)	promoter-TSS (NM_001081465)	102	NM_001081466	57080	Mm.332735	NM_020331	ENSMUSG00000023079	Gtf2ird1	1700012P16Rik|BEN|Cream1|ESTM9|GTF3|Gtf2il|MusTRD1|Tg(Alb1-Myc)166.8Sst|WBSCR11|X83320	general transcription factor II I repeat domain-containing 1	protein-coding
unique_peak1-4791-20-3-2.48807478459119-3.8429424127101	chr3	132227218	132228052	+	0	NA	Intergenic	Intergenic	-65520	NM_001270430	433653		NM_001270430		Gm5549	EG433653|Gimd1	predicted gene 5549	protein-coding
unique_peak2-39116-3-5--0.998945590680433-0.96108193396963	chr8	82917801	82918150	+	0	NA	Intergenic	Intergenic	-99969	NM_010369	14934	Mm.13123	NM_010369	ENSMUSG00000051839	Gypa	AI853584|CD235a|GPA	glycophorin A	protein-coding
common_peak1-7461-41-50-0.028723362877165-0.309546119484978	chr1	92831511	92833117	+	0	NA	intron (NM_053015, intron 8 of 15)	PB1D10|SINE|Alu	-17371	NM_001101647	623503	Mm.471593	NM_001101647	ENSMUSG00000090550	Prlh	EG623503	prolactin releasing hormone	protein-coding
common_peak1-14923-41-18-1.45322119140507-4.04334585201374	chr3	100332950	100334700	+	0	NA	Intergenic	Intergenic	-40710	NM_001142952	74645	Mm.226900	NM_001142952		Fam46c	4930431B09Rik|AI449797	family with sequence similarity 46, member C	protein-coding
common_peak1-14869-104-245--0.637769304127082-4.41169506149068	chr3	95658126	95659989	+	0	NA	intron (NM_027541, intron 1 of 15)	intron (NM_027541, intron 1 of 15)	619	NM_027541	70767	Mm.279872	NM_027541	ENSMUSG00000015748	Prpf3	3632413F13Rik	PRP3 pre-mRNA processing factor 3 homolog (yeast)	protein-coding
common_peak1-7475-90-107-0.299417523778684-0.913863405173818	chr1	177257287	177259522	+	0	NA	intron (NM_001199003, intron 2 of 17)	intron (NM_001199003, intron 2 of 17)	164272	NM_011880	24012	Mm.7956	NM_011880		Rgs7	-	regulator of G protein signaling 7	protein-coding
common_peak1-10770-37-11-1.94103057076466-5.31705276927178	chr14	70777636	70778758	+	0	NA	intron (NM_021308, intron 20 of 22)	B1_Mur1|SINE|Alu	-26966	NM_001135151	213053	Mm.270647	NM_144808	ENSMUSG00000022094	Slc39a14	FAD-123|ZIP-14|Zip14|fad123	solute carrier family 39 (zinc transporter), member 14	protein-coding
common_peak1-12217-13-8-0.608547029195456-0.660903317613904	chr17	34591628	34592247	+	0	NA	intron (NM_001001177, intron 19 of 19)	intron (NM_001001177, intron 19 of 19)	20945	NM_030746	632126	Mm.484958	NM_030746	ENSMUSG00000058435	Btnl4	Btn3a3|EG632126|NG11	butyrophilin-like 4	protein-coding
common_peak2-23583-28-21-0.593527501184165-0.884951936461256	chr15	80012252	80013181	+	0	NA	intron (NM_010795, intron 1 of 1)	intron (NM_010795, intron 1 of 1)	8565	NM_010795	17309	Mm.299693	NM_010795	ENSMUSG00000042428	Mgat3	1110038J12Rik|AI848272|GnT-III	mannoside acetylglucosaminyltransferase 3	protein-coding
unique_peak1-3157-13-4-1.45654393575041-2.23384849113406	chr18	37998213	37998872	+	0	NA	intron (NM_001301256, intron 3 of 3)	intron (NM_001301256, intron 3 of 3)	15772	NR_105945	102465592		NR_105945		Mir6979	mmu-mir-6979	microRNA mir-6979	ncRNA
unique_peak2-36729-8-7-0.00522241794757061-1.00793137938329	chr3	57093813	57094313	+	0	NA	intron (NM_008536, intron 5 of 6)	intron (NM_008536, intron 5 of 6)	11778	NM_008536	17112	Mm.856	NM_008536	ENSMUSG00000027800	Tm4sf1	L6|M3s1	transmembrane 4 superfamily member 1	protein-coding
common_peak2-26394-25-31--0.138150094654894-0.315509160416417	chr2	53190591	53191336	+	0	NA	Intergenic	Intergenic	139845	NM_022989	65103	Mm.37623	NM_022989	ENSMUSG00000026960	Arl6ip6	2310057C01Rik|2610529A11Rik|Aip-6	ADP-ribosylation factor-like 6 interacting protein 6	protein-coding
common_peak2-30842-17-16-0.130833496954699-0.356936432242225	chr7	133115735	133116374	+	0	NA	intron (NM_001101488, intron 2 of 6)	intron (NM_001101488, intron 2 of 6)	109871	NM_001101488	269994	Mm.39599	NM_001101488	ENSMUSG00000046182	Gsg1l	AI852434|C230098I05Rik|G630023A01Rik|Gm637|g1l	GSG1-like	protein-coding
unique_peak2-36851-5-4--0.0263084308932156-0.909929411522249	chr3	89349120	89349449	+	0	NA	intron (NM_080466, intron 1 of 7)	intron (NM_080466, intron 1 of 7)	25198	NM_080466	140493	Mm.120250	NM_080466		Kcnn3	KCa2.3|SK3|SKCA3	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	protein-coding
common_peak1-14723-19-23--0.18227517405947-0.320777457303847	chr3	83055353	83056218	+	0	NA	Intergenic	Intergenic	196325	NM_016784	53317	Mm.286349	NM_016784	ENSMUSG00000027998	Plrg1	AA958940|C80566|Tango4	pleiotropic regulator 1, PRL1 homolog (Arabidopsis)	protein-coding
common_peak2-20070-22-7-1.6472841050874-2.63337704757512	chr1	153134239	153134729	+	0	NA	Intergenic	Intergenic	-57144	NM_001039512	117198	Mm.33764	NM_028582	ENSMUSG00000023150	Ivns1abp	1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850	influenza virus NS1A binding protein	protein-coding
common_peak1-17332-39-26-0.860873744755685-1.85759988472351	chr6	146927644	146929259	+	0	NA	intron (NM_001170433, intron 4 of 27)	intron (NM_001170433, intron 4 of 27)	-25508	NM_028509	73344	Mm.391543	NM_028509	ENSMUSG00000040163	1700034J05Rik	-	RIKEN cDNA 1700034J05 gene	protein-coding
common_peak1-8096-18-15-0.312919151228352-0.456667090758524	chr1	181005020	181005767	+	0	NA	intron (NM_027188, intron 8 of 11)	intron (NM_027188, intron 8 of 11)	442741	NM_027188	69726	Mm.222338	NM_027188		Smyd3	2410008A19Rik|Zmynd1	SET and MYND domain containing 3	protein-coding
common_peak1-11639-21-22-0.0459273092092225-0.319918318021793	chr16	21793876	21794590	+	0	NA	promoter-TSS (NR_037958)	promoter-TSS (NR_037958)	-187	NR_037958	100043489	Mm.326535	NR_037957	ENSMUSG00000097290	1300002E11Rik	1500026P21Rik	RIKEN cDNA 1300002E11 gene	ncRNA
unique_peak2-37673-7-35--2.37083417114412-4.72588744919881	chr5	94517524	94518897	+	0	NA	Intergenic	Intergenic	-18639	NM_198667	381724	Mm.380154	NM_198667	ENSMUSG00000072822	BC061212	-	cDNA sequence BC061212	protein-coding
common_peak1-18756-13-12-0.0780323124966764-0.334470287753051	chr8	126596297	126596977	+	0	NA	Intergenic	Intergenic	49264	NM_001029876	382038	Mm.334891	NM_001029876	ENSMUSG00000031976	Urb2	C77575|mKIAA0133	URB2 ribosome biogenesis 2 homolog (S. cerevisiae)	protein-coding
common_peak1-19464-43-36-0.573109819894753-1.16883084967253	chrX	109141670	109143490	+	0	NA	Intergenic	Lx5|LINE|L1	-64549	NM_031382	83556	Mm.190608	NM_031382	ENSMUSG00000034555	Tex16	OTTMUSG00000018437	testis expressed gene 16	protein-coding
unique_peak2-34463-16-24--0.525592547506663-0.561823156887258	chr14	31205158	31206042	+	0	NA	intron (NM_028981, intron 1 of 46)	intron (NM_028981, intron 1 of 46)	-38928	NM_001083616	12289	Mm.9772	NM_028981	ENSMUSG00000015968	Cacna1d	8430418G19Rik|C79217|Cacnl1a2|Cchl1a|Cchl1a2|D-LTCC	calcium channel, voltage-dependent, L type, alpha 1D subunit	protein-coding
common_peak2-19989-13-13--0.0288828914198356-0.309074325783021	chr1	134079201	134079932	+	0	NA	Intergenic	Intergenic	-8447	NM_001033250	213409	Mm.426321	NM_001033250	ENSMUSG00000079330	Lemd1	4930540I23Rik|6430514M23Rik|AI428128|LEMP-1	LEM domain containing 1	protein-coding
unique_peak1-6915-7-2-1.21412832957703-1.45399745587252	chr8	106268745	106269271	+	0	NA	Intergenic	Intergenic	141309	NR_045730	71058	Mm.67707	NR_045730		4933400L20Rik	-	RIKEN cDNA 4933400L20 gene	ncRNA
unique_peak2-36965-2-12--2.61789397440441-2.55640854263862	chr3	113276341	113276933	+	0	NA	intron (NM_001110505, intron 1 of 10)	intron (NM_001110505, intron 1 of 10)	1043	NM_007446	11722	Mm.439727	NM_007446	ENSMUSG00000074264	Amy1	Amy-1|Amy1a|C030014B17Rik	amylase 1, salivary	protein-coding
common_peak2-29404-27-24-0.347689761120511-0.550049347815233	chr6	113442459	113443141	+	0	NA	TTS (NM_172487)	TTS (NM_172487)	9012	NM_172487	210673	Mm.133060	NM_172487	ENSMUSG00000045009	Prrt3	6330505P20|B230206N24Rik	proline-rich transmembrane protein 3	protein-coding
common_peak2-24425-88-136--0.0826196737899938-0.34118642031761	chr17	17623765	17625913	+	0	NA	Intergenic	Intergenic	85189	NM_025681	66643	Mm.268018	NM_025681	ENSMUSG00000047786	Lix1	5730466L18Rik	limb expression 1 homolog (chicken)	protein-coding
common_peak1-19148-39-38-0.330359028056905-0.603849233446504	chr9	87021902	87022574	+	0	NA	Intergenic	Intergenic	-16903	NM_001177731	244958	Mm.335337	NM_001101482	ENSMUSG00000042761	Mrap2	BB633055	melanocortin 2 receptor accessory protein 2	protein-coding
common_peak2-20491-13-12-0.0780323124966764-0.334470287753051	chr10	56486250	56486763	+	0	NA	Intergenic	AT_rich|Low_complexity|Low_complexity	389400	NM_010288	14609	Mm.378921	NM_010288	ENSMUSG00000050953	Gja1	AU042049|AW546267|Cnx43|Cx43|Cx43alpha1|Gja-1|Npm1|connexin43	gap junction protein, alpha 1	protein-coding
unique_peak2-37546-16-23--0.466698858453094-0.497202060940027	chr5	30959838	30960823	+	0	NA	3' UTR (NM_175675, exon 6 of 6)	3' UTR (NM_175675, exon 6 of 6)	-8945	NM_007681	12615	Mm.290563	NM_007681	ENSMUSG00000029177	Cenpa	Cenp-A	centromere protein A	protein-coding
unique_peak2-36519-4-11--1.6084230145744-1.68134727924692	chr2	161594211	161594766	+	0	NA	intron (NM_001291149, intron 11 of 30)	intron (NM_001291149, intron 11 of 30)	-622061	NR_040617	77645	Mm.447752	NR_040617	ENSMUSG00000084919	Ptprtos	C330008G21Rik	protein tyrosine phosphatase, receptor type T, opposite strand	ncRNA
common_peak2-27958-13-15--0.221527969362231-0.308519316180257	chr4	40278897	40279458	+	0	NA	Intergenic	L1Md_F2|LINE|L1	18912	NR_040663	75819	Mm.399244	NR_040663	ENSMUSG00000087137	4930509K18Rik	-	RIKEN cDNA 4930509K18 gene	ncRNA
unique_peak2-33910-6-14--1.34149248522822-1.01572999746118	chr12	64965760	64966383	+	0	NA	Intergenic	L1MC2|LINE|L1	609814	NM_001163271	623046	Mm.189552	NM_001163271	ENSMUSG00000043060	Fscb	EG623046	fibrous sheath CABYR binding protein	protein-coding
common_peak2-21887-23-31--0.278232495490919-0.396392531282608	chr12	116047651	116048342	+	0	NA	Intergenic	Intergenic	-296091	NR_106063	102465664		NR_106063	miRBase:MI0022945	Mir7094-2	mmu-mir-7094-2	microRNA mir-7094-2	ncRNA
common_peak2-23964-34-30-0.427872216614391-0.737357778720995	chr16	16870554	16871436	+	0	NA	promoter-TSS (NM_011624)	promoter-TSS (NM_011624)	11	NM_011624	21976	Mm.326089	NM_011624	ENSMUSG00000022779	Top3b	-	topoisomerase (DNA) III beta	protein-coding
unique_peak2-39270-3-8--1.58390809140159-1.39487600375387	chr8	120563142	120563558	+	0	NA	Intergenic	Intergenic	-237521	NM_026758	68533	Mm.181836	NM_026758	ENSMUSG00000031843	Mphosph6	1110001M01Rik|AA536809|C86426	M phase phosphoprotein 6	protein-coding
common_peak1-11827-76-128--0.249282869559972-0.632145354087965	chr16	78375664	78377160	+	0	NA	intron (NM_001297747, intron 1 of 4)	CpG	590	NR_002700	654432	Mm.458574	NR_002700	ENSMUSG00000044645	Gm7334	EG654432	B-cell translocation gene 3 pseudogene	pseudo
common_peak2-24661-37-41-0.133675648707058-0.363463023472118	chr17	35918536	35919272	+	0	NA	Intergenic	Lx5|LINE|L1	9509	NR_045459	74601	Mm.410840	NR_045459	ENSMUSG00000092171	4833427F10Rik	-	RIKEN cDNA 4833427F10 gene	ncRNA
unique_peak1-5302-10-7-0.356415345008769-1.12966497611638	chr5	74493213	74493740	+	0	NA	Intergenic	L1M3|LINE|L1	3921	NR_031758	100313943	Mm.46547	NR_031758	ENSMUSG00000093355	Snora26	MBI-6	small nucleolar RNA, H/ACA box 26	snoRNA
common_peak2-27779-9-9--0.132314688483142-1.03275496310833	chr3	134239592	134240184	+	0	NA	Intergenic	Intergenic	-153289	NR_040600	75208	Mm.84580	NR_040600		4930539C22Rik	-	RIKEN cDNA 4930539C22 gene	ncRNA
common_peak2-19542-40-24-1.01511949297637-2.45983369815837	chr1	155073952	155074906	+	0	NA	intron (NM_010683, intron 25 of 27)	intron (NM_010683, intron 25 of 27)	-40852	NM_008485	16782	Mm.329272	NM_008485	ENSMUSG00000026479	Lamc2	AA589349	laminin, gamma 2	protein-coding
common_peak2-20856-14-9-0.577288065470282-0.630231561310125	chr11	82116154	82116717	+	0	NA	Intergenic	MIR|SINE|MIR	-85967	NM_023438	270893	Mm.341593	NM_023438	ENSMUSG00000020701	Tmem132e	Gm644	transmembrane protein 132E	protein-coding
unique_peak1-2447-26-12-1.22745937401737-2.03163221100073	chr15	102013643	102014705	+	0	NA	intron (NM_144942, intron 8 of 14)	intron (NM_144942, intron 8 of 14)	5300	NM_144942	246277	Mm.296382	NM_144942	ENSMUSG00000023044	Csad	Csd	cysteine sulfinic acid decarboxylase	protein-coding
common_peak1-16673-28-60--0.877778217741424-2.02794041588715	chr6	5297515	5298726	+	0	NA	Intergenic	Lx7|LINE|L1	-35266	NM_023048	65255	Mm.51340	NM_023048	ENSMUSG00000042607	Asb4	8430401O13Rik|AV117194|AW060255	ankyrin repeat and SOCS box-containing 4	protein-coding
common_peak1-8684-42-62--0.234950595632733-0.420930521695299	chr11	20740622	20742275	+	0	NA	Intergenic	Intergenic	-10337	NM_173752	216551	Mm.76694	NM_173752	ENSMUSG00000042363	Lgalsl	1110067D22Rik|A530071M23|Grpa|Hspc159|Lgalsla	lectin, galactoside binding-like	protein-coding
common_peak1-12824-15-17--0.157760250886656-0.307611222530528	chr18	69196431	69197115	+	0	NA	Intergenic	Intergenic	-14846	NR_105780	102465187		NR_105780	miRBase:MI0021890	Mir145b	mmu-mir-145b	microRNA mir-145b	ncRNA
common_peak1-14186-16-20--0.274053780510699-0.353907621462756	chr2	144556174	144556676	+	0	NA	intron (NM_025314, intron 4 of 5)	intron (NM_025314, intron 4 of 5)	-92977	NM_025490	66328	Mm.45377	NM_025490	ENSMUSG00000027431	Scp2d1	1700010M22Rik	SCP2 sterol-binding domain containing 1	protein-coding
unique_peak2-39801-5-6--0.511735258063458-0.947717972411649	chrX	20617865	20618276	+	0	NA	intron (NM_001013387, intron 2 of 4)	L1_Mus4|LINE|L1	21094	NM_001013387	319535	Mm.170163	NM_001013387		Zfp182	6330583I20Rik|Znf182	zinc finger protein 182	protein-coding
unique_peak2-35010-5-8--0.874305337448166-1.10484139239135	chr15	101145586	101146171	+	0	NA	Intergenic	MTC|LTR|MaLR	22235	NR_033803	77717	Mm.391998	NR_033803		6030408B16Rik	AI225877	RIKEN cDNA 6030408B16 gene	ncRNA
common_peak1-18096-22-13-0.8399291830298-1.1381569562463	chr8	117259924	117261011	+	0	NA	intron (NM_019573, intron 8 of 8)	intron (NM_019573, intron 8 of 8)	296915	NM_019573	80707	Mm.440420	NM_019573	ENSMUSG00000004637	Wwox	5330426P09Rik|9030416C10Rik|WOX1	WW domain-containing oxidoreductase	protein-coding
common_peak1-17940-10-12--0.344024373132323-0.340565874754526	chr7	127421459	127422106	+	0	NA	exon (NM_026458, exon 20 of 31)	exon (NM_026458, exon 20 of 31)	-50416	NM_177213	320631	Mm.78330	NM_177213	ENSMUSG00000054746	Abca15	4930500I12Rik	ATP-binding cassette, sub-family A (ABC1), member 15	protein-coding
common_peak1-13582-63-54-0.65695287754593-1.99380250813685	chr2	13571959	13573879	+	0	NA	Intergenic	Intergenic	76981	NM_011701	22352	Mm.268000	NM_011701	ENSMUSG00000026728	Vim	-	vimentin	protein-coding
common_peak2-31367-21-34--0.559793751678731-0.677299098039755	chr8	84979267	84980184	+	0	NA	Intergenic	Intergenic	-53240	NM_008357	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak1-13809-8-5-0.420259917226415-1.10484139239135	chr2	49687860	49688340	+	0	NA	intron (NM_027990, intron 1 of 9)	MT2A|LTR|ERVL	44894	NM_027990	71897	Mm.41381	NM_027990	ENSMUSG00000026765	Lypd6b	2310010M24Rik|AW049525	LY6/PLAUR domain containing 6B	protein-coding
common_peak1-19132-19-27--0.404667595395917-0.464317215211849	chr9	78821298	78822132	+	0	NA	Intergenic	(TCTCTG)n|Simple_repeat|Simple_repeat	358362	NM_153098	235505	Mm.32955	NM_153098	ENSMUSG00000046186	Cd109	9930012E15Rik|AI480638|GARP	CD109 antigen	protein-coding
unique_peak2-35898-7-13--1.00826409175941-0.697979855752659	chr19	3929796	3930282	+	0	NA	promoter-TSS (NM_026316)	promoter-TSS (NM_026316)	-323	NM_026316	67689	Mm.109341	NM_026316	ENSMUSG00000024885	Aldh3b1	1700001N19Rik|ALDH4|ALDH7	aldehyde dehydrogenase 3 family, member B1	protein-coding
unique_peak1-2540-17-4-1.89636824331768-2.60953805094651	chr16	21996436	21997191	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-1198	NM_001289581	239759	Mm.33192	NM_153404	ENSMUSG00000044626	Liph	C130037N08Rik|D16Wsu119e|H06|Lpdlr|P3|PLA1B|lpd1|lpd2|mPA-PLA1	lipase, member H	protein-coding
common_peak1-15016-105-131-0.276939791164713-0.929635894836409	chr3	116661239	116662938	+	0	NA	intron (NM_023245, intron 1 of 7)	intron (NM_023245, intron 1 of 7)	-9097	NR_040596	74654	Mm.410820	NR_040596	ENSMUSG00000080907	4930455H04Rik	-	RIKEN cDNA 4930455H04 gene	ncRNA
unique_peak2-37128-2-13--2.72480917832092-2.79529063155376	chr4	11965727	11966449	+	0	NA	TTS (NM_177861)	TTS (NM_177861)	49016	NM_177861	329795	Mm.475125	NM_177861	ENSMUSG00000049488	Tmem67	5330408M12Rik|B230117O07|b2b1163.1Clo|b2b1291.1Clo	transmembrane protein 67	protein-coding
common_peak2-24460-19-23--0.18227517405947-0.320777457303847	chr17	23828420	23829365	+	0	NA	Intergenic	MT2_Mm|LTR|ERVL	-7899	NM_020293	56863	Mm.491368	NM_020293	ENSMUSG00000066720	Cldn9	nmf329	claudin 9	protein-coding
common_peak2-30718-13-11-0.193509529916613-0.379391706698377	chr7	113459326	113459919	+	0	NA	Intergenic	L1VL4|LINE|L1	8420	NR_030720	668128	Mm.484022	NR_030720		Gm8989	EG668128|Gm21911	very large inducible GTPase 1 pseudogene	pseudo
common_peak1-18417-11-18--0.739233929191972-0.671582559449692	chr8	73353826	73354383	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	9515	NM_027560	70807	Mm.24215	NM_027560	ENSMUSG00000002910	Arrdc2	4632416I05Rik|Ilad1	arrestin domain containing 2	protein-coding
unique_peak2-37691-4-8--1.19338551529556-1.21878474469819	chr5	99526380	99526816	+	0	NA	Intergenic	Intergenic	-60500	NM_008926	19092	Mm.263002	NM_008926	ENSMUSG00000029334	Prkg2	AW212535|CGKII|Prkgr2|cGK-II	protein kinase, cGMP-dependent, type II	protein-coding
common_peak1-12843-37-30-0.571796761098944-1.03797455172871	chr18	73571571	73572666	+	0	NA	Intergenic	ORR1B1|LTR|MaLR	-160241	NM_001039214	240396	Mm.24131	NM_001039214	ENSMUSG00000037253	Mex3c	A130001D14Rik|BC035207|BM-013|Rkhd2	mex3 homolog C (C. elegans)	protein-coding
common_peak2-27994-2-9--2.23938235115068-1.87199725847353	chr4	44980744	44981333	+	0	NA	Intergenic	Intergenic	-13245	NM_080289	76238	Mm.196574	NM_080289	ENSMUSG00000035637	Grhpr	1110059D05Rik|6430629L09Rik	glyoxylate reductase/hydroxypyruvate reductase	protein-coding
common_peak1-15400-30-55--0.637679512565731-1.16883084967252	chr4	82858973	82859969	+	0	NA	Intergenic	Intergenic	110622	NM_027238	69863	Mm.5540	NM_025782	ENSMUSG00000038172	Ttc39b	1810054D07Rik|9130422G05Rik|AI450603|AV103077|AW215585	tetratricopeptide repeat domain 39B	protein-coding
common_peak2-30709-118-177-0.0480592521561771-0.330506122213151	chr7	112678591	112680550	+	0	NA	Intergenic	RMER13B|LTR|ERVK	-23304	NM_011421	20597	Mm.4628	NM_011421	ENSMUSG00000037049	Smpd1	A-SMase|ASM|Zn-SMase|aSMase	sphingomyelin phosphodiesterase 1, acid lysosomal	protein-coding
common_peak2-28825-7-6--0.00826409175941478-0.97990265578305	chr5	66077394	66077796	+	0	NA	intron (NM_001081321, intron 2 of 31)	intron (NM_001081321, intron 2 of 31)	11500	NM_001081321	71521	Mm.278974	NM_027818	ENSMUSG00000029202	Pds5a	9030416H16Rik|E230024D05Rik|mKIAA0648	PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	protein-coding
unique_peak1-6325-10-7-0.356415345008769-1.12966497611638	chr7	45920801	45921352	+	0	NA	Intergenic	Intergenic	598828	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak2-19689-33-40--0.026214442092555-0.301029995663988	chr1	58795356	58796397	+	0	NA	intron (NM_207653, intron 6 of 9)	B4A|SINE|B4	8480	NM_001293805	12633	Mm.336848	NM_009805	ENSMUSG00000026031	Cflar	2310024N18Rik|A430105C05Rik|CLARP|Cash|Casper|ENSMUSG00000072980|FLAME|FLAME-1|Flip|Gm9845|I-FLICE|MRIT|c-Flip	CASP8 and FADD-like apoptosis regulator	protein-coding
common_peak2-25447-18-21--0.146512467408946-0.306326795069975	chr19	4125884	4126576	+	0	NA	promoter-TSS (NM_016666)	promoter-TSS (NM_016666)	270	NM_025889	66990	Mm.276255	NM_025889		Tmem134	2410001H17Rik|AI463452	transmembrane protein 134	protein-coding
common_peak1-8706-61-57-0.524768334621768-1.35565283421421	chr11	94321146	94322759	+	0	NA	intron (NM_001177888, intron 7 of 34)	intron (NM_001177888, intron 7 of 34)	13560	NM_001177888	12291	Mm.29585	NM_009783	ENSMUSG00000020866	Cacna1g	Cav3.1d|[a]1G|a1G|alpha-1G|mKIAA1123	calcium channel, voltage-dependent, T type, alpha 1G subunit	protein-coding
unique_peak2-38324-3-10--1.87341470859657-1.75805390616669	chr6	147064678	147065208	+	0	NA	Intergenic	Intergenic	25346	NM_001081237	232539	Mm.491206	NM_001081237	ENSMUSG00000040102	Klhl42	A330079N23Rik|AI450355|C230080I20Rik|Ctb9|Klhdc5|mKIAA1340	kelch-like 42	protein-coding
common_peak2-29148-50-57-0.18295932135138-0.444157274383078	chr5	127616481	127617649	+	0	NA	Intergenic	Intergenic	-33870	NR_045371	75916	Mm.394659	NR_045371		4930572K03Rik	-	RIKEN cDNA 4930572K03 gene	ncRNA
unique_peak2-39898-2-7--1.91745425626332-1.45399745587252	chrX	88115571	88115853	+	0	NA	Intergenic	RLTR22_Mus|LTR|ERVK	-21769	NM_001101450	212952	Mm.477436	NM_001101450	ENSMUSG00000091497	Gm44	-	predicted gene 44	protein-coding
common_peak2-31177-10-7-0.356415345008769-1.12966497611638	chr8	46842650	46843117	+	0	NA	intron (NM_172752, intron 6 of 22)	intron (NM_172752, intron 6 of 22)	61768	NR_045739	319940	Mm.441720	NR_045739	ENSMUSG00000085440	Sorbs2os	D330022K07Rik	sorbin and SH3 domain containing 2, opposite strand	ncRNA
common_peak1-14737-8-25--1.69521730019352-2.29727994934156	chr3	86224222	86224705	+	0	NA	intron (NM_030695, intron 36 of 56)	intron (NM_030695, intron 36 of 56)	127742	NM_011839	23937	Mm.389466	NM_011839	ENSMUSG00000057777	Mab21l2	-	mab-21-like 2 (C. elegans)	protein-coding
common_peak1-15539-30-31-0.169675409491873-0.382130460680153	chr4	119124805	119125858	+	0	NA	intron (NM_001014900, intron 7 of 7)	intron (NM_001014900, intron 7 of 7)	30042	NM_001014900	332934	Mm.388911	NM_001014900	ENSMUSG00000070806	Zmynd12	AI414736	zinc finger, MYND domain containing 12	protein-coding
common_peak1-13421-41-27-0.893793782791056-2.04885494247584	chr19	53554274	53555583	+	0	NA	Intergenic	PB1D10|SINE|Alu	-15642	NR_028427	381232	Mm.248624	NR_028427	ENSMUSG00000097636	5830416P10Rik	4833407H14Rik|5430437C04Rik|ENSMUSG00000074788|Gm10758	RIKEN cDNA 5830416P10 gene	ncRNA
common_peak1-16550-23-50--0.950657837462415-1.97528391682864	chr5	144255125	144256002	+	0	NA	intron (NM_144915, intron 11 of 14)	intron (NM_144915, intron 11 of 14)	30202	NM_144915	231871	Mm.469963	NM_144915	ENSMUSG00000039206	Daglb	E330036I19Rik	diacylglycerol lipase, beta	protein-coding
unique_peak1-5742-18-2-2.7279566505072-4.01305082679061	chr6	47838754	47839535	+	0	NA	intron (NM_146175, intron 2 of 7)	intron (NM_146175, intron 2 of 7)	11590	NM_146175	101095	Mm.440186	NM_146175	ENSMUSG00000025821	Zfp282	AI449432|C81429|E430019K09Rik|HUB1	zinc finger protein 282	protein-coding
common_peak2-23457-16-5-1.53330114154691-1.80287260729378	chr15	67145444	67145837	+	0	NA	intron (NR_045140, intron 5 of 8)	intron (NR_045140, intron 5 of 8)	87309	NR_045140	69334	Mm.63770	NR_045140		1700012I11Rik	-	RIKEN cDNA 1700012I11 gene	ncRNA
common_peak1-13257-33-41--0.0609798602532319-0.303710893903464	chr19	32711491	32712646	+	0	NA	intron (NM_001201470, intron 3 of 11)	intron (NM_001201470, intron 3 of 11)	17573	NM_011864	23972	Mm.203916	NM_011864	ENSMUSG00000024899	Papss2	1810018P12Rik|AI159688|AtpsU2|Atpsk2|Sk2|bm	3'-phosphoadenosine 5'-phosphosulfate synthase 2	protein-coding
common_peak1-12730-56-42-0.809331070737145-2.34985861513818	chr18	53744737	53746102	+	0	NA	Intergenic	Intergenic	-62386	NR_040349	100502945	Mm.376937	NR_040349		Gm19466	-	predicted gene, 19466	ncRNA
common_peak1-19153-40-65--0.385418436607355-0.66882990514363	chr9	92249491	92251146	+	0	NA	intron (NM_001033184, intron 6 of 6)	intron (NM_001033184, intron 6 of 6)	46103	NM_001033184	78459	Mm.179195	NM_001033184	ENSMUSG00000074139	1700057G04Rik	-	RIKEN cDNA 1700057G04 gene	protein-coding
common_peak2-26207-10-23--1.22854715571239-1.44380006500971	chr2	26139882	26140567	+	0	NA	intron (NM_177841, intron 4 of 9)	RCHARR1|DNA|MER1_type	9853	NM_177841	329366	Mm.77712	NM_177841	ENSMUSG00000048038	4932418E24Rik	-	RIKEN cDNA 4932418E24 gene	protein-coding
common_peak2-31980-8-5-0.420259917226415-1.10484139239135	chr9	69456892	69457223	+	0	NA	Intergenic	Intergenic	151690	NM_022378	64290	Mm.440890	NM_022378	ENSMUSG00000059246	Foxb1	C43|Fkh5|Foxb1a|Foxb1b|Hfh-e5.1|Mf3|Twh	forkhead box B1	protein-coding
unique_peak1-2326-12-3-1.64877598508764-2.36932189928148	chr15	83408585	83409215	+	0	NA	intron (NM_183017, intron 12 of 13)	intron (NM_183017, intron 12 of 13)	14897	NM_009775	12257	Mm.1508	NM_009775	ENSMUSG00000041736	Tspo	Bzrp|IBP|PBR|Tspo1	translocator protein	protein-coding
unique_peak2-34074-3-5--0.998945590680433-0.96108193396963	chr13	4662550	4662928	+	0	NA	Intergenic	Intergenic	-54329	NM_018859	56043	Mm.251908	NM_018859	ENSMUSG00000045410	Akr1e1	1810061I10Rik|Akr1e2	aldo-keto reductase family 1, member E1	protein-coding
unique_peak2-33756-3-6--1.22133801201688-1.08602067057793	chr11	117557950	117558347	+	0	NA	intron (NM_198022, intron 1 of 21)	RMER13B|LTR|ERVK	42545	NM_198022	217351	Mm.40272	NM_198022	ENSMUSG00000025571	Tnrc6c	9930033H14Rik|mKIAA1582	trinucleotide repeat containing 6C	protein-coding
unique_peak1-5941-18-7-1.31291915122835-1.71830443967823	chr6	90794756	90795626	+	0	NA	Intergenic	Intergenic	-35074	NM_001134384	232227	Mm.196943	NM_182784	ENSMUSG00000034312	Iqsec1	AW561907|BC026481|BRAG2|D6Ertd349e|cI-43	IQ motif and Sec7 domain 1	protein-coding
unique_peak2-36061-2-10--2.37688587490062-2.09384600808989	chr19	47886126	47886733	+	0	NA	intron (NM_027559, intron 8 of 37)	intron (NM_027559, intron 8 of 37)	25422	NM_027559	100048534	Mm.29457	NM_027559	ENSMUSG00000044948	Cfap43	4632415N18Rik|4930428C11Rik|4930463G05Rik|AI429486|D19Ertd652e|Wdr96	cilia and flagella associated protein 43	protein-coding
common_peak1-11135-59-94--0.24449160745837-0.545897237751466	chr15	68362247	68363494	+	0	NA	Intergenic	Intergenic	-190019	NR_029718	387228		NR_029718	miRBase:MI0000549	Mir30d	Mirn30d|mmu-mir-30d	microRNA 30d	ncRNA
common_peak2-23340-11-17--0.661231417190699-0.58239619684445	chr15	38473396	38473844	+	0	NA	Intergenic	MIR|SINE|MIR	-24599	NM_018745	54375	Mm.250214	NM_018745	ENSMUSG00000037458	Azin1	1700085L02Rik|AI414949|Oazi|Oazin	antizyme inhibitor 1	protein-coding
common_peak1-15964-24-49--0.850646287007008-1.56058662248874	chr5	31240679	31241374	+	0	NA	intron (NR_105788, intron 2 of 7)	intron (NR_105788, intron 2 of 7)	2628	NR_105788	102465191		NR_105788		Mir6369	mmu-mir-6369	microRNA mir-6369	ncRNA
unique_peak2-34799-7-19--1.52283726458917-1.55050753388976	chr15	72654726	72655548	+	0	NA	intron (NM_001164641, intron 17 of 17)	MMSAT4|Satellite|Satellite	-14383	NR_002864	353342	Mm.440245	NR_002864		Peg13	-	paternally expressed 13	ncRNA
common_peak2-22891-39-47-0.0307987461979975-0.310078451983505	chr14	32050344	32051144	+	0	NA	TTS (NM_027949)	TTS (NM_027949)	13660	NM_027949	71838	Mm.5348	NM_027949	ENSMUSG00000021902	Phf7	1700006H01Rik|1700010P14Rik|AI427892|AW555949	PHD finger protein 7	protein-coding
common_peak1-18615-8-10--0.454209200689727-1.078512453669	chr8	107503410	107503901	+	0	NA	Intergenic	Lx6|LINE|L1	18037	NM_197999	72361	Mm.26580	NM_197999	ENSMUSG00000031877	Ces2g	2210023G05Rik|Ces2l	carboxylesterase 2G	protein-coding
unique_peak1-4253-13-6-0.971117108580164-1.01572999746118	chr2	128566736	128567332	+	0	NA	intron (NM_008587, intron 4 of 18)	intron (NM_008587, intron 4 of 18)	42301	NM_008587	17289	Mm.239655	NM_008587	ENSMUSG00000014361	Mertk	Eyk|Mer|Nyk|nmf12	c-mer proto-oncogene tyrosine kinase	protein-coding
unique_peak2-37067-5-10--1.16381195464315-1.33892459842472	chr3	144663606	144664183	+	0	NA	Intergenic	Intergenic	-25885	NM_207208	99663	Mm.442050	NM_207208	ENSMUSG00000068547	Clca6	9130020L07Rik|AI504701|Clca4	chloride channel calcium activated 6	protein-coding
common_peak1-7777-15-7-1.01216475055566-1.08658567012551	chr1	93668521	93669232	+	0	NA	Intergenic	Intergenic	-29178	NM_007855	13345	Mm.9474	NM_007855	ENSMUSG00000007805	Twist2	Dermo1|bHLHa39	twist basic helix-loop-helix transcription factor 2	protein-coding
common_peak2-25145-59-81--0.0321880037455058-0.302378744963234	chr18	46280115	46281268	+	0	NA	Intergenic	MTD|LTR|MaLR	-75777	NR_040342	107003	Mm.395148	NR_040342		A330093E20Rik	AU043608	RIKEN cDNA A330093E20 gene	ncRNA
unique_peak1-5605-15-3-2.01216475055566-3.03427613622886	chr6	90750529	90751066	+	0	NA	intron (NM_001134384, intron 1 of 13)	intron (NM_001134384, intron 1 of 13)	9320	NM_001134384	232227	Mm.196943	NM_182784	ENSMUSG00000034312	Iqsec1	AW561907|BC026481|BRAG2|D6Ertd349e|cI-43	IQ motif and Sec7 domain 1	protein-coding
unique_peak1-7267-8-4-0.683294323060208-1.21878474469819	chr9	96195675	96196188	+	0	NA	intron (NM_178667, intron 8 of 13)	B1_Mus1|SINE|Alu	36264	NM_001184710	211586	Mm.17977	NM_178667	ENSMUSG00000032411	Tfdp2	1110029I05Rik|A330080J22Rik|DP-3|DP3	transcription factor Dp 2	protein-coding
unique_peak1-3717-10-2-1.77145284428761-2.09384600808989	chr19	45872723	45873366	+	0	NA	intron (NM_030716, intron 1 of 8)	MTE-int|LTR|MaLR	13737	NM_001276358	80906	Mm.213204	NM_030716	ENSMUSG00000025221	Kcnip2	KChIP2	Kv channel-interacting protein 2	protein-coding
common_peak2-27022-14-6-1.09186123830004-1.16633110333236	chr2	173731188	173731565	+	0	NA	Intergenic	Lx2|LINE|L1	168304	NM_019806	56491	Mm.260456	NM_019806	ENSMUSG00000054455	Vapb	AI225786|AI840687|AI848259|D2Abb2e|R75548|VAP33b|Vamp33b	vesicle-associated membrane protein, associated protein B and C	protein-coding
unique_peak1-5233-14-7-0.899216160357645-0.947446088118041	chr5	43661901	43662648	+	0	NA	intron (NM_001177379, intron 5 of 10)	intron (NM_001177379, intron 5 of 10)	-35681	NR_028417	665934	Mm.381491	NR_028417		Gm7854	EG665934|ENSMUSG00000054483	predicted gene 7854	ncRNA
common_peak2-29356-25-39--0.460078189542257-0.621525249893804	chr5	150522030	150522968	+	0	NA	intron (NM_001081204, intron 4 of 14)	B3|SINE|B2	41667	NM_001081204	381694	Mm.45060	NM_001081204	ENSMUSG00000051950	B3glct	B3galtl|Gm1057	beta-3-glucosyltransferase	protein-coding
unique_peak2-34193-3-5--0.998945590680433-0.96108193396963	chr13	37882441	37882714	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	-35330	NM_026830	68750	Mm.491109	NM_026830	ENSMUSG00000039087	Rreb1	1110037N09Rik|AA414966|B930013M22Rik	ras responsive element binding protein 1	protein-coding
unique_peak1-5278-14-1-2.89921616035764-3.91338994363176	chr5	66004907	66005473	+	0	NA	Intergenic	ID|SINE|ID	76690	NM_016786	53323	Mm.319512	NM_016786	ENSMUSG00000029203	Ube2k	AW492011|D5Ertd601e|E2-25k|Hip2|Hypg|Lig	ubiquitin-conjugating enzyme E2K	protein-coding
common_peak1-10542-12-7-0.648775985087639-0.697979855752659	chr14	17920528	17921113	+	0	NA	Intergenic	Intergenic	-5975	NM_001289761	218772	Mm.259318	NM_011243	ENSMUSG00000017491	Rarb	A830025K23|Hap|Nr1b2	retinoic acid receptor, beta	protein-coding
unique_peak1-4220-6-1-1.5653981103803-1.56314192529759	chr2	121588398	121588912	+	0	NA	intron (NM_172673, intron 1 of 14)	B1_Mur4|SINE|Alu	44138	NM_172673	228564	Mm.121514	NM_172673	ENSMUSG00000027238	Frmd5	1500032A09Rik|5830442F04|A930004K21Rik|R75430	FERM domain containing 5	protein-coding
common_peak1-18646-18-8-1.14299414978604-1.45476480588849	chr8	111624274	111625116	+	0	NA	Intergenic	MLT1D|LTR|MaLR	163935	NR_037295	100526511		NR_037295		Mir3108	mmu-mir-3108	microRNA 3108	ncRNA
common_peak2-20973-49-104--0.707961694640939-2.38909555930979	chr11	20631134	20632738	+	0	NA	intron (NM_001252503, intron 1 of 7)	L1MB3|LINE|L1	9623	NM_001290545	216549	Mm.356580	NM_181411	ENSMUSG00000049659	Aftph	-	aftiphilin	protein-coding
unique_peak1-2149-13-7-0.778472030637769-0.817533494790411	chr15	59004009	59004662	+	0	NA	Intergenic	RSINE1|SINE|B4	-90754	NM_144800	211401	Mm.215481	NM_144800	ENSMUSG00000022353	Mtss1	2310003N14Rik|BC024131|D130001D01Rik|Mim|mKIAA0429	metastasis suppressor 1	protein-coding
common_peak2-30161-20-20-0.0957573618124323-0.321718508207528	chr6	147042688	147043180	+	0	NA	intron (NM_001081237, intron 1 of 2)	intron (NM_001081237, intron 1 of 2)	3337	NM_001081237	232539	Mm.491206	NM_001081237	ENSMUSG00000040102	Klhl42	A330079N23Rik|AI450355|C230080I20Rik|Ctb9|Klhdc5|mKIAA1340	kelch-like 42	protein-coding
common_peak1-19481-19-23--0.18227517405947-0.320777457303847	chrX	140542052	140543078	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-45673	NR_040271	319764	Mm.208482	NR_040271	ENSMUSG00000085139	A730046J19Rik	-	RIKEN cDNA A730046J19 gene	ncRNA
common_peak2-22797-9-7-0.18961340640422-1.05908390183068	chr14	8134456	8134933	+	0	NA	Intergenic	Intergenic	30215	NM_001025085	545013	Mm.422841	NM_001025085	ENSMUSG00000072726	Gm5797	EG545013	predicted gene 5797	protein-coding
common_peak1-8208-7-7--0.200909169701811-0.97990265578305	chr10	5497691	5498212	+	0	NA	intron (NM_007956, intron 4 of 8)	L1Md_F2|LINE|L1	220473	NM_022027	64009	Mm.331626	NM_022027	ENSMUSG00000019769	Syne1	8B|A330049M09Rik|BE692247|C130039F11Rik|CPG2|Myne1|mKIAA1756	spectrin repeat containing, nuclear envelope 1	protein-coding
common_peak1-8535-49-75--0.241643690418401-0.490255246984408	chr10	89744963	89745962	+	0	NA	intron (NM_001128086, intron 10 of 24)	Lx9|LINE|L1	-293010	NM_001177397	77531	Mm.440605	NM_181398	ENSMUSG00000058589	Anks1b	AIDA-1b|C030032C09Rik|E530015N03Rik|ENSMUSG00000078431|Gm10937|Gm1555	ankyrin repeat and sterile alpha motif domain containing 1B	protein-coding
common_peak1-13500-22-13-0.8399291830298-1.1381569562463	chr2	60702163	60703064	+	0	NA	intron (NM_020296, intron 1 of 13)	intron (NM_020296, intron 1 of 13)	16882	NM_001141932	56878	Mm.259667	NM_020296	ENSMUSG00000026970	Rbms1	2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1	RNA binding motif, single stranded interacting protein 1	protein-coding
common_peak1-12167-64-105--0.262474052854595-0.626610071870342	chr17	29458783	29460553	+	0	NA	intron (NM_023734, intron 2 of 6)	intron (NM_023734, intron 2 of 6)	3841	NM_023734	74116	Mm.30950	NM_023734	ENSMUSG00000024011	Pi16	1200009H11Rik|Cripi|PI-16	peptidase inhibitor 16	protein-coding
unique_peak1-3294-8-5-0.420259917226415-1.10484139239135	chr18	75389063	75389589	+	0	NA	intron (NM_027727, intron 14 of 16)	intron (NM_027727, intron 14 of 16)	67645	NR_045394	100503117	Mm.250517	NR_045393		2010010A06Rik	5033420E22Rik	RIKEN cDNA 2010010A06 gene	ncRNA
common_peak1-12662-41-34-0.571865687903694-1.12519986426579	chr18	36492478	36494089	+	0	NA	Intergenic	B2_Mm1a|SINE|B2	-14995	NM_001081365	66060	Mm.272527	NM_001081365		Cystm1	0610010O12Rik	cysteine-rich transmembrane module containing 1	protein-coding
common_peak2-31770-16-31--0.881736357731938-1.20073456579999	chr9	21723616	21724453	+	0	NA	Intergenic	Intergenic	-1469	NM_031874	19340	Mm.260157	NM_031874	ENSMUSG00000019066	Rab3d	C130057E11Rik	RAB3D, member RAS oncogene family	protein-coding
common_peak2-22122-7-5-0.214128329577033-1.01466476204226	chr12	84284854	84285240	+	0	NA	Intergenic	Intergenic	-244905	NR_046045	74283	Mm.398247	NR_046045		1700085C21Rik	-	RIKEN cDNA 1700085C21 gene	ncRNA
common_peak1-12929-159-115-1.18392809230652-13.3708261087142	chr19	5799689	5802688	+	0	NA	non-coding (NR_002847, exon 1 of 1)	non-coding (NR_002847, exon 1 of 1)	1483	NR_002847	72289	Mm.298256	NR_002847	ENSMUSG00000092341	Malat1	2210401K01Rik|9430072K23Rik|AI647968|Neat2	metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)	ncRNA
common_peak1-7770-74-102-0.0293860497953888-0.310471510585226	chr1	93160066	93162954	+	0	NA	intron (NM_026454, intron 3 of 9)	intron (NM_026454, intron 3 of 9)	14614	NM_026454	67921	Mm.337238	NM_026454	ENSMUSG00000034343	Ube2f	2510010F15Rik|AI851109	ubiquitin-conjugating enzyme E2F (putative)	protein-coding
unique_peak2-33802-1-6--2.43441193227435-1.56314192529759	chr11	120555060	120555445	+	0	NA	intron (NM_026877, intron 7 of 15)	intron (NM_026877, intron 7 of 15)	17277	NM_001164224	68938	Mm.294020	NM_026877	ENSMUSG00000025142	Aspscr1	1190006K01Rik|ASPC|ASPCR1|ASPL|ASPS|RCC17|TUG	alveolar soft part sarcoma chromosome region, candidate 1 (human)	protein-coding
common_peak1-9158-16-12-0.417823924126969-0.489164546851866	chr11	77782702	77783447	+	0	NA	intron (NM_001291225, intron 5 of 15)	intron (NM_001291225, intron 5 of 15)	-13244	NM_174852	268448	Mm.274329	NM_174852	ENSMUSG00000037791	Phf12	2410142K10Rik|F630045O13|PF1|mKIAA1523	PHD finger protein 12	protein-coding
common_peak1-18376-17-45--1.30526561785198-2.66231292118422	chr8	70645862	70646593	+	0	NA	Intergenic	Intergenic	-147754	NM_177698	234353	Mm.32525	NM_027626	ENSMUSG00000030465	Psd3	4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D	pleckstrin and Sec7 domain containing 3	protein-coding
common_peak2-32316-33-109--1.45002215099913-7.51163328481481	chrX	68678461	68679767	+	0	NA	intron (NM_138309, intron 7 of 8)	intron (NM_138309, intron 7 of 8)	61179	NM_016985	53332	Mm.219672	NM_016985	ENSMUSG00000015214	Mtmr1	AW049210	myotubularin related protein 1	protein-coding
unique_peak2-37819-4-5--0.608423014574403-0.909929411522249	chr5	125178903	125179191	+	0	NA	intron (NM_011596, intron 9 of 19)	intron (NM_011596, intron 9 of 19)	-26408	NM_019536	56087	Mm.261014	NM_019536	ENSMUSG00000038011	Dnah10	Dnahc10	dynein, axonemal, heavy chain 10	protein-coding
unique_peak1-104-10-5-0.771452844287613-1.33892459842472	chr1	53846069	53846557	+	0	NA	Intergenic	Intergenic	-4254	NM_133810	98267	Mm.25559	NM_133810	ENSMUSG00000026094	Stk17b	3110009A03Rik|AI120141|Drak2	serine/threonine kinase 17b (apoptosis-inducing)	protein-coding
unique_peak2-35218-6-12--1.13504160776079-1.45089835786865	chr16	91011246	91011690	+	0	NA	promoter-TSS (NR_028368)	promoter-TSS (NR_028368)	-26	NR_028368	67394	Mm.491293	NR_028368	ENSMUSG00000087354	4930404I05Rik	-	RIKEN cDNA 4930404I05 gene	ncRNA
common_peak1-9841-8-16--1.08224042330277-0.891319708951328	chr12	77238539	77239065	+	0	NA	intron (NR_104386, intron 5 of 7)	intron (NR_104386, intron 5 of 7)	39444	NM_010157	13983	Mm.2561	NM_010157	ENSMUSG00000021055	Esr2	ER[b]|ERbeta|Estrb	estrogen receptor 2 (beta)	protein-coding
common_peak1-15910-35-45--0.092191697594509-0.310901174692144	chr5	22549632	22550973	+	0	NA	intron (NM_001081231, intron 1 of 3)	intron (NM_001081231, intron 1 of 3)	-297600	NR_027362	330052	Mm.459265	NR_027362		A930003O13Rik	-	RIKEN cDNA A930003O13 gene	ncRNA
unique_peak2-33471-10-19--0.965512749878593-0.917676348953458	chr11	69259347	69260217	+	0	NA	exon (NM_001081330, exon 63 of 86)	exon (NM_001081330, exon 63 of 86)	-32605	NM_001017426	216850	Mm.261201	NM_001017426	ENSMUSG00000018476	Kdm6b	1700064E03Rik|BC038313|Jmjd3|mKIAA0346	KDM1 lysine (K)-specific demethylase 6B	protein-coding
common_peak1-14881-27-41--0.400771471883525-0.542588322087496	chr3	95929256	95930194	+	0	NA	intron (NM_001025613, intron 2 of 12)	intron (NM_001025613, intron 2 of 12)	21275	NM_001025614	229603	Mm.272336	NM_001025613	ENSMUSG00000038495	Otud7b	2900060B22Rik|4930463P07Rik|AI462125|CEZANNE|Trabid2|Za20d1	OTU domain containing 7B	protein-coding
common_peak2-20528-18-39--1.00900894365901-1.65365064026544	chr10	62485985	62486865	+	0	NA	promoter-TSS (NM_026085)	promoter-TSS (NM_026085)	172	NM_001079824	432467	Mm.274784	NM_001079824	ENSMUSG00000020069	Hnrnph3	AA693301|AI666703|Hnrph3	heterogeneous nuclear ribonucleoprotein H3	protein-coding
common_peak2-23432-55-57-0.34663887602513-0.781433730164713	chr15	62118146	62120155	+	0	NA	Intergenic	Intergenic	-68144	NR_003523	67552	Mm.484027	NM_026230		H2afy3	4933432H23Rik	H2A histone family, member Y3	pseudo
common_peak1-8379-22-32--0.397110014271049-0.488172498216822	chr10	61680132	61680885	+	0	NA	intron (NM_197996, intron 1 of 7)	ORR1B1|LTR|MaLR	13458	NM_197996	70423	Mm.416781	NM_197996	ENSMUSG00000037031	Tspan15	1110036D12Rik|2700063A19Rik|AW048364|Tm4sf15	tetraspanin 15	protein-coding
common_peak2-28781-32-31-0.27909201921966-0.499999074040591	chr5	53948458	53949367	+	0	NA	intron (NM_001080928, intron 1 of 10)	intron (NM_001080928, intron 1 of 10)	1894	NM_001080928	19664	Mm.209292	NM_009035	ENSMUSG00000039191	Rbpj	AI843960|CBF1|Igkjrb|Igkrsbp|RBP-J|RBP-J kappa|RBPjk|Rbpsuh	recombination signal binding protein for immunoglobulin kappa J region	protein-coding
unique_peak1-3808-19-5-1.81772482594053-2.59995804677862	chr2	26606856	26607699	+	0	NA	Intergenic	Intergenic	-80475	NM_010695	16821	Mm.123925	NM_010695	ENSMUSG00000026919	Lcn4	A630045M08Rik|Vnsp2	lipocalin 4	protein-coding
common_peak1-18898-6-7--0.434601889619698-0.97990265578305	chr9	37233210	37233714	+	0	NA	intron (NM_001164767, intron 7 of 27)	intron (NM_001164767, intron 7 of 27)	7298	NM_001164767	19649	Mm.212826	NM_011248	ENSMUSG00000032128	Robo3	Rbig1|Rig-1|Rig1|Robo3a|Robo3b	roundabout homolog 3 (Drosophila)	protein-coding
common_peak2-28848-78-107-0.0519335919970665-0.325820647467598	chr5	72913747	72915659	+	0	NA	intron (NM_133921, intron 18 of 22)	intron (NM_133921, intron 18 of 22)	-18924	NM_001122756	53419	Mm.332425	NM_016869	ENSMUSG00000005220	Corin	AV273130|Lrp4	corin	protein-coding
common_peak1-13982-17-11-0.633333837483882-0.769930178837768	chr2	102158492	102159180	+	0	NA	intron (NM_020267, intron 4 of 4)	intron (NM_020267, intron 4 of 4)	82221	NM_020267	80985	Mm.315002	NM_020267	ENSMUSG00000027189	Trim44	Dipb|Mc7	tripartite motif-containing 44	protein-coding
unique_peak1-2572-15-0-4.01216475055566-5.11750992628768	chr16	25899688	25900240	+	0	NA	Intergenic	Intergenic	97962	NM_001127264	22061	Mm.20894	NM_011641	ENSMUSG00000022510	Trp63	AI462811|Ket|P51/P63|P63|P73l|Tp63|Trp53rp1	transformation related protein 63	protein-coding
common_peak1-9647-19-10-0.943255708024389-1.16735254179725	chr12	79904737	79905420	+	0	NA	intron (NM_019579, intron 3 of 14)	intron (NM_019579, intron 3 of 14)	55144	NM_019579	56217	Mm.425777	NM_019579	ENSMUSG00000021112	Mpp5	3830420B02Rik|AI255216|AI644496|Pals1	membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)	protein-coding
common_peak1-18794-51-99--0.568932364172151-1.64896270734846	chr9	43105224	43107183	+	0	NA	Intergenic	Intergenic	-12643	NM_023655	72169	Mm.273277	NM_023655	ENSMUSG00000032013	Trim29	1110047J21Rik|2810431N19Rik|4732461M22Rik|AI119726	tripartite motif-containing 29	protein-coding
unique_peak2-33058-4-7--1.02346051385325-1.09384600808989	chr10	77032555	77033045	+	0	NA	Intergenic	Intergenic	-11712	NM_145925	108705	Mm.28853	NM_145925	ENSMUSG00000009291	Pttg1ip	1810010L20Rik|AI314311|AU018448|C79540	pituitary tumor-transforming 1 interacting protein	protein-coding
common_peak2-30816-6-7--0.434601889619698-0.97990265578305	chr7	128523102	128523469	+	0	NA	Intergenic	Intergenic	-12525	NM_001081327	195646	Mm.247449	NM_177575	ENSMUSG00000046321	Hs3st2	6430516N12Rik|A830061E14Rik|AW491345	heparan sulfate (glucosamine) 3-O-sulfotransferase 2	protein-coding
common_peak1-11270-11-3-1.50869358425161-1.95434855131066	chr15	81663675	81664112	+	0	NA	Intergenic	Intergenic	22049	NM_017376	21685	Mm.270278	NM_017376	ENSMUSG00000022389	Tef	2310028D20Rik	thyrotroph embryonic factor	protein-coding
unique_peak2-38947-6-15--1.4346018896197-1.16633110333236	chr8	27023873	27024422	+	0	NA	exon (NM_008432, exon 21 of 27)	exon (NM_008432, exon 21 of 27)	63069	NM_029884	52120	Mm.28326	NM_029884	ENSMUSG00000037260	Hgsnat	9430010M12Rik|AW208455|D8Ertd354e|Tmem76	heparan-alpha-glucosaminide N-acetyltransferase	protein-coding
common_peak2-21213-38-40-0.213900654680447-0.459173512026158	chr11	61761455	61762237	+	0	NA	Intergenic	Intergenic	-8419	NM_001281818	432572	Mm.458025	NM_001029936	ENSMUSG00000042331	Specc1	2810012G08Rik|B230396K10Rik|Cytsb	sperm antigen with calponin homology and coiled-coil domains 1	protein-coding
common_peak1-11378-50-82--0.334099114867972-0.677371116707613	chr15	96709192	96710863	+	0	NA	Intergenic	Intergenic	176360	NM_027052	69354	Mm.250980	NM_027052	ENSMUSG00000022464	Slc38a4	1110012E16Rik|1700012A18Rik|Ata3|mATA3|mNAT3	solute carrier family 38, member 4	protein-coding
common_peak1-16348-54-69-0.0438027446847675-0.314891503798722	chr5	120612293	120613670	+	0	NA	intron (NM_028762, intron 21 of 23)	(TG)n|Simple_repeat|Simple_repeat	-23709	NR_045793	100503427	Mm.446834	NR_045793	ENSMUSG00000097368	Gm10390	ENSMUSG00000072671	predicted gene 10390	ncRNA
common_peak2-21369-18-18-0.0649916377847664-0.323898164595606	chr11	78343480	78344121	+	0	NA	5' UTR (NM_001159392, exon 2 of 7)	5' UTR (NM_001159392, exon 2 of 7)	5962	NM_001159392	21927	Mm.386774	NM_009395	ENSMUSG00000017615	Tnfaip1	Edp-1|Edp1|Tnfip1	tumor necrosis factor, alpha-induced protein 1 (endothelial)	protein-coding
common_peak1-8820-8-6-0.197867495889966-1.03789460276074	chr11	22800160	22800697	+	0	NA	intron (NM_144514, intron 2 of 2)	ORR1C2|LTR|MaLR	-40092	NM_001169114	53625	Mm.395495	NM_016888	ENSMUSG00000051650	B3gnt2	AA408337|AA409404|AW260308|B3Galt6|B3gnt1|BGnT-1|BGnT-2|BGnT1|BGnT2|Beta3gnt	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2	protein-coding
common_peak2-22359-10-13--0.450939577048835-0.386243247519795	chr13	25007549	25008255	+	0	NA	intron (NM_172532, intron 6 of 9)	intron (NM_172532, intron 6 of 9)	10433	NR_045182	73326	Mm.458692	NR_045182		4932702P03Rik	1700047I16Rik	RIKEN cDNA 4932702P03 gene	ncRNA
common_peak1-19089-110-151-0.154070246935059-0.521007666747502	chr9	71484621	71486147	+	0	NA	intron (NM_026599, intron 14 of 18)	intron (NM_026599, intron 14 of 18)	-45217	NM_001033208	102371	Mm.27585	NM_001033208	ENSMUSG00000041361	Myzap	AA407270|AV006038|Gcom1|Gm640|Grinl1a7|Myozap	myocardial zonula adherens protein	protein-coding
common_peak2-31843-30-31-0.169675409491873-0.382130460680153	chr9	45845993	45847390	+	0	NA	intron (NM_027498, intron 1 of 24)	PB1D9|SINE|Alu	25788	NM_027498	70661	Mm.219459	NM_027498	ENSMUSG00000034135	Sik3	5730525O22Rik|9030204A07Rik|AI447252|AI846254|AI849445|Qsk|SIK-3|mKIAA0999	SIK family kinase 3	protein-coding
common_peak2-29581-9-8-0.0196884049619079-1.03275496310833	chr6	48511259	48511711	+	0	NA	intron (NM_177736, intron 2 of 2)	ORR1B2-int|LTR|MaLR	6687	NM_177736	243371	Mm.290764	NM_177736	ENSMUSG00000073096	Lrrc61	BC027309	leucine rich repeat containing 61	protein-coding
common_peak1-13771-7-7--0.200909169701811-0.97990265578305	chr2	35595106	35595556	+	0	NA	Intergenic	Intergenic	43079	NM_001290639	69601	Mm.29629	NM_001001602	ENSMUSG00000026883	Dab2ip	2310011D08Rik|AI480459|Aip1|mKIAA1743	disabled 2 interacting protein	protein-coding
unique_peak2-33661-8-9--0.316705676939792-1.03275496310833	chr11	100397281	100397839	+	0	NA	Intergenic	RMER19A|LTR|ERVK	-8246	NM_001199296	104112	Mm.282039	NM_134037	ENSMUSG00000020917	Acly	A730098H14Rik|AW538652	ATP citrate lyase	protein-coding
common_peak1-7988-11-37--1.73923392919197-3.52967372072617	chr1	161875938	161876686	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-98199	NR_028111	67647	Mm.171518	NM_001024470	ENSMUSG00000090394	4930523C07Rik	-	RIKEN cDNA 4930523C07 gene	protein-coding
common_peak1-16504-16-27--0.689091279789542-0.798885335210229	chr5	139478517	139479152	+	0	NA	Intergenic	(TAGA)n|Simple_repeat|Simple_repeat	-7927	NM_008808	18590	Mm.2675	NM_008808	ENSMUSG00000025856	Pdgfa	-	platelet derived growth factor, alpha	protein-coding
common_peak1-19091-51-27-1.26756890354497-4.11766476295455	chr9	71667786	71669147	+	0	NA	Intergenic	RLTR12A|LTR|ERVK	-49057	NM_026599	68178	Mm.99961	NM_026599	ENSMUSG00000032232	Cgnl1	4933421H10Rik|9930020M10Rik|AI503810|Jacop	cingulin-like 1	protein-coding
unique_peak2-32974-3-9--1.73591118484664-1.57096726280955	chr10	54075248	54075818	+	0	NA	Intergenic	Intergenic	279805	NR_038016	100502920	Mm.403982	NR_038016	ENSMUSG00000097069	Gm16998	-	predicted gene, 16998	ncRNA
unique_peak1-404-17-2-2.63333383748388-3.75443312462699	chr1	156222482	156223298	+	0	NA	Intergenic	Intergenic	-118854	NR_040629	78112	Mm.401935	NR_040629		4930452N14Rik	-	RIKEN cDNA 4930452N14 gene	ncRNA
unique_peak1-1844-14-6-1.09186123830004-1.16633110333236	chr14	47488889	47489626	+	0	NA	Intergenic	Intergenic	-13383	NM_028966	74480	Mm.214454	NM_028966	ENSMUSG00000021838	Samd4	1700024G08Rik|1700111L17Rik|4933436G17Rik|Samd4a|Smaug|Smaug1	sterile alpha motif domain containing 4	protein-coding
common_peak1-18770-9-10--0.269818212233077-1.05503135781948	chr8	126841449	126842014	+	0	NA	intron (NM_139272, intron 3 of 15)	intron (NM_139272, intron 3 of 15)	86437	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
common_peak2-26504-9-8-0.0196884049619079-1.03275496310833	chr2	85048472	85048977	+	0	NA	Intergenic	Intergenic	-11868	NM_001033346	241528	Mm.291095	NM_001033346	ENSMUSG00000075224	Lrrc55	A330097E02Rik|Gm351	leucine rich repeat containing 55	protein-coding
unique_peak1-7138-11-5-0.923731083530457-1.477227296591	chr9	56129187	56129767	+	0	NA	intron (NM_172924, intron 3 of 6)	Lx8|LINE|L1	-120600	NM_019793	56434	Mm.28484	NM_019793	ENSMUSG00000032324	Tspan3	1700055K04Rik|TM4-A|Tm4sf8	tetraspanin 3	protein-coding
unique_peak1-4056-19-5-1.81772482594053-2.59995804677862	chr2	60710841	60711805	+	0	NA	intron (NM_020296, intron 1 of 13)	intron (NM_020296, intron 1 of 13)	8172	NM_001141932	56878	Mm.259667	NM_020296	ENSMUSG00000026970	Rbms1	2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1	RNA binding motif, single stranded interacting protein 1	protein-coding
common_peak1-15246-10-13--0.450939577048835-0.386243247519795	chr4	11321657	11322162	+	0	NA	Intergenic	Intergenic	-7979	NM_194055	207920	Mm.387719	NM_194055	ENSMUSG00000040728	Esrp1	2210008M09Rik|A630065D16|BC031468|Rbm35a	epithelial splicing regulatory protein 1	protein-coding
common_peak2-20858-63-71-0.268387589628277-0.653467308648399	chr11	83851796	83853833	+	0	NA	exon (NM_194341, exon 19 of 20)	exon (NM_194341, exon 19 of 20)	29045	NM_019819	56405	Mm.240885	NM_019819	ENSMUSG00000018648	Dusp14	1110014C10Rik|2310042C07Rik|D11Ertd395e|MKP-L|Mkp6	dual specificity phosphatase 14	protein-coding
common_peak2-29593-22-29--0.259606490521114-0.36542888694933	chr6	50454873	50456044	+	0	NA	Intergenic	Intergenic	-49289	NM_001163645	71720	Mm.44153	NM_027881	ENSMUSG00000029822	Osbpl3	1200014M06Rik|6720421I08Rik|A530055M08|ORP3|OSBP3	oxysterol binding protein-like 3	protein-coding
common_peak2-31146-22-18-0.399356591643819-0.549581527953406	chr8	41014237	41014941	+	0	NA	Intergenic	Intergenic	-286557	NM_001113326	20288	Mm.239291	NM_031195	ENSMUSG00000025044	Msr1	MRS-A|MSR|MSR-A|SR-AI|SR-AII|Scara1|Scvr	macrophage scavenger receptor 1	protein-coding
unique_peak2-35402-2-5--1.50241675698448-1.08602067057793	chr17	32247981	32248372	+	0	NA	Intergenic	Intergenic	-19808	NR_027316	435518	Mm.328944	NR_027316	ENSMUSG00000002791	Pdxk-ps	ENSMUSG00000002791|Gm9743	pyridoxal (pyridoxine, vitamin B6) kinase, pseudogene	pseudo
unique_peak2-35077-1-6--2.43441193227435-1.56314192529759	chr16	16215790	16216206	+	0	NA	intron (NM_026163, intron 1 of 12)	intron (NM_026163, intron 1 of 12)	2560	NM_026163	67451	Mm.2252	NM_026163	ENSMUSG00000041957	Pkp2	1200008D14Rik|1200012P04Rik|AA516617|Pkp2l	plakophilin 2	protein-coding
unique_peak1-767-7-1-1.79909083029819-1.80617997398389	chr10	122276848	122277355	+	0	NA	intron (NM_176919, intron 4 of 8)	intron (NM_176919, intron 4 of 8)	145679	NR_029527	387251		NR_029527	miRBase:MI0000138	Mirlet7i	Mirnlet7i|mmu-let-7i	microRNA let7i	ncRNA
common_peak2-30355-12-20--0.743541437691122-0.625923329873571	chr7	28049513	28050134	+	0	NA	intron (NM_010950, intron 2 of 9)	intron (NM_010950, intron 2 of 9)	6043	NM_010950	18223	Mm.458153	NM_010950	ENSMUSG00000063160	Numbl	nbl	numb-like	protein-coding
common_peak2-31643-59-71-0.155438999430266-0.417582018066374	chr8	124642571	124644709	+	0	NA	Intergenic	B4|SINE|B4	141716	NR_106096	102466915		NR_106096		Mir7237	mmu-mir-7237	microRNA mir-7237	ncRNA
common_peak1-15231-52-11-2.52329748954454-10.4721374870381	chr4	3874586	3875572	+	0	NA	intron (NR_104355, intron 7 of 8)	intron (NR_104355, intron 7 of 8)	8508	NR_104356	66433	Mm.27406	NM_181391	ENSMUSG00000042198	Chchd7	1810049H20Rik	coiled-coil-helix-coiled-coil-helix domain containing 7	protein-coding
unique_peak2-38430-3-6--1.22133801201688-1.08602067057793	chr7	25712274	25712625	+	0	NA	TTS (NM_001130150)	TTS (NM_001130150)	23084	NM_001130152	16801	Mm.3181	NM_008488	ENSMUSG00000040940	Arhgef1	Lbcl2|Lsc	Rho guanine nucleotide exchange factor (GEF) 1	protein-coding
common_peak2-20816-11-21--0.950738034385684-0.991115276827166	chr10	128058284	128058959	+	0	NA	Intergenic	MTC|LTR|MaLR	4941	NM_013765	27370	Mm.261679	NM_013765	ENSMUSG00000025362	Rps26	-	ribosomal protein S26	protein-coding
unique_peak1-982-10-2-1.77145284428761-2.09384600808989	chr11	67523791	67524451	+	0	NA	intron (NM_175681, intron 12 of 12)	MTC|LTR|MaLR	15293	NM_009038	19674	Mm.439726	NM_009038	ENSMUSG00000020907	Rcvrn	CAR|S-modulin	recoverin	protein-coding
common_peak1-13788-19-15-0.402687326661686-0.519193887192487	chr2	38533022	38534183	+	0	NA	Intergenic	MER2|DNA|MER2_type	-34176	NM_011187	19177	Mm.389251	NM_011187	ENSMUSG00000026750	Psmb7	AU020723|MC14	proteasome (prosome, macropain) subunit, beta type 7	protein-coding
unique_peak1-6305-7-1-1.79909083029819-1.80617997398389	chr7	35792320	35792841	+	0	NA	intron (NM_008820, intron 9 of 14)	intron (NM_008820, intron 9 of 14)	49005	NM_009884	12611	Mm.273090	NM_009884	ENSMUSG00000056216	Cebpg	C/EBP[g]|C/EBPgamma|GPE1-BP|Gpe1bp|Ig/EBP	CCAAT/enhancer binding protein (C/EBP), gamma	protein-coding
common_peak2-26364-45-54-0.0789983118202118-0.332057628060234	chr2	38643249	38644025	+	0	NA	intron (NM_010264, intron 3 of 10)	intron (NM_010264, intron 3 of 10)	-3602	NM_001159549	14536	Mm.439703	NM_010264	ENSMUSG00000063972	Nr6a1	1700113M01Rik|Gcnf|NCNF|RTR	nuclear receptor subfamily 6, group A, member 1	protein-coding
common_peak2-20316-36-55--0.328033835889849-0.518540604135986	chr10	53379070	53380022	+	0	NA	intron (NM_001081428, intron 9 of 17)	intron (NM_001081428, intron 9 of 17)	-29301	NM_027830	71567	Mm.278221	NM_027830	ENSMUSG00000058298	Mcm9	9030408O17Rik|Gm235|Mcmdc1	minichromosome maintenance complex component 9	protein-coding
common_peak2-25832-10-13--0.450939577048835-0.386243247519795	chr19	40513346	40513812	+	0	NA	intron (NM_001034962, intron 1 of 22)	intron (NM_001034962, intron 1 of 22)	12309	NM_001034962	20411	Mm.210815	NM_009166		Sorbs1	2310065E01Rik|9530001P15Rik|CAP|SH3P12|Sh3d5|mKIAA1296	sorbin and SH3 domain containing 1	protein-coding
unique_peak1-1194-8-4-0.683294323060208-1.21878474469819	chr11	103095898	103096339	+	0	NA	intron (NM_016896, intron 6 of 15)	intron (NM_016896, intron 6 of 15)	-16372	NM_177801	328019	Mm.189646	NM_177801	ENSMUSG00000044787	Spata32	4933400C05Rik|VAD1.2	spermatogenesis associated 32	protein-coding
unique_peak2-36946-10-12--0.344024373132323-0.340565874754526	chr3	107278919	107279565	+	0	NA	intron (NM_001293689, intron 8 of 11)	B3|SINE|B2	-17426	NM_145922	99738	Mm.101976	NM_145922	ENSMUSG00000027895	Kcnc4	AI850292|KSHIIIC|Kcr2-4|Kv3.4	potassium voltage gated channel, Shaw-related subfamily, member 4	protein-coding
common_peak1-17641-14-8-0.729291158915332-0.771068449301682	chr7	49758934	49759484	+	0	NA	Intergenic	B3|SINE|B2	-55759	NM_027702	71162	Mm.158598	NM_027702	ENSMUSG00000030463	4933421I07Rik	-	RIKEN cDNA 4933421I07 gene	protein-coding
common_peak1-19412-9-5-0.604650905683064-1.21398586181642	chrX	73786596	73787061	+	0	NA	Intergenic	Intergenic	61435	NM_001201395	74987	Mm.107996	NM_001201395	ENSMUSG00000079525	4930468A15Rik	-	RIKEN cDNA 4930468A15 gene	protein-coding
common_peak2-23004-11-22--1.0148683718054-1.11267835143409	chr14	61173030	61173537	+	0	NA	Intergenic	Intergenic	-80283	NM_001033272	219140	Mm.149776	NM_001033272	ENSMUSG00000021990	Spata13	C79050|ESTM11|X83327|mFLJ00298	spermatogenesis associated 13	protein-coding
unique_peak2-35319-15-35--1.15776025088666-1.87578206828671	chr17	15374857	15376056	+	0	NA	intron (NR_046164, intron 2 of 4)	intron (NR_046164, intron 2 of 4)	2291	NR_046164	328747	Mm.256835	NR_046164	ENSMUSG00000097624	Gm5091	C330048F19	predicted gene 5091	ncRNA
common_peak1-8977-19-36--0.806766038967264-1.16836819221353	chr11	58938173	58938895	+	0	NA	intron (NM_199152, intron 8 of 89)	L1M4b|LINE|L1	11343	NM_001171512	380698	Mm.339542	NM_199152	ENSMUSG00000061462	Obscn	BC046431|Gm878|OTTMUSG00000005786|UNC89	obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF	protein-coding
unique_peak1-5776-18-4-1.99099105634099-2.82951996911245	chr6	54177121	54177930	+	0	NA	intron (NM_001163640, intron 6 of 12)	intron (NM_001163640, intron 6 of 12)	-45291	NM_023543	69993	Mm.321147	NM_023543	ENSMUSG00000004633	Chn2	1700026N20Rik|4930557O16Rik|ARHGAP3|Bch	chimerin 2	protein-coding
unique_peak1-201-10-6-0.549060422951165-1.21398586181642	chr1	82834166	82834760	+	0	NA	Intergenic	Intergenic	-1595	NM_010472	15463	Mm.392569	NM_010472	ENSMUSG00000026159	Agfg1	AU045498|C130049H11Rik|C85612|D730048C23Rik|Hrb|RAB|Rip	ArfGAP with FG repeats 1	protein-coding
common_peak2-27127-17-11-0.633333837483882-0.769930178837768	chr3	19428787	19429494	+	0	NA	intron (NM_025489, intron 1 of 4)	RLTR15|LTR|ERVK	-2107	NM_001163537	66326	Mm.45615	NM_025489	ENSMUSG00000027606	Dnajc5b	1700008A05Rik	DnaJ (Hsp40) homolog, subfamily C, member 5 beta	protein-coding
common_peak1-16323-9-9--0.132314688483142-1.03275496310833	chr5	115573179	115573614	+	0	NA	3' UTR (NM_175352, exon 5 of 5)	3' UTR (NM_175352, exon 5 of 5)	-4041	NM_007383	11409	Mm.18759	NM_007383	ENSMUSG00000029545	Acads	AI196007|Bcd-1|Bcd1|Hdlq8|SCAD	acyl-Coenzyme A dehydrogenase, short chain	protein-coding
common_peak1-17333-11-11--0.0762689164695427-0.301029995663976	chr6	146979440	146980250	+	0	NA	3' UTR (NM_026221, exon 27 of 27)	3' UTR (NM_026221, exon 27 of 27)	-1214	NM_025620	66532	Mm.45888	NM_025620	ENSMUSG00000040121	Rep15	2210417D09Rik	RAB15 effector protein	protein-coding
common_peak2-21268-35-99--1.21248593131222-5.22937233263495	chr11	69758252	69759953	+	0	NA	exon (NM_009204, exon 6 of 11)	exon (NM_009204, exon 6 of 11)	2590	NM_009204	20528	Mm.10661	NM_009204	ENSMUSG00000018566	Slc2a4	Glut-4|Glut4	solute carrier family 2 (facilitated glucose transporter), member 4	protein-coding
common_peak2-22544-29-21-0.652858461977813-1.06916698217164	chr13	58273636	58274661	+	0	NA	Intergenic	Intergenic	15138	NM_198004	75731	Mm.293919	NM_198004	ENSMUSG00000050002	Idnk	5133401N09Rik	idnK gluconokinase homolog (E. coli)	protein-coding
unique_peak2-35140-2-6--1.72480917832092-1.26211192963361	chr16	30969099	30969389	+	0	NA	intron (NM_198626, intron 3 of 3)	intron (NM_198626, intron 3 of 3)	112274	NM_198626	268880	Mm.286693	NM_198626	ENSMUSG00000047434	Xxylt1	AI480653	xyloside xylosyltransferase 1	protein-coding
common_peak1-16250-40-47-0.0740131820299421-0.336492456843107	chr5	104571012	104572374	+	0	NA	Intergenic	Intergenic	-28038	NM_010080	666279	Mm.319832	NM_010080	ENSMUSG00000053268	Dspp	Dmp2|Dmp3|Dpp|Dsp	dentin sialophosphoprotein	protein-coding
common_peak2-23685-3-7--1.41398308995928-1.23214870625617	chr15	85972542	85972934	+	0	NA	intron (NM_145475, intron 12 of 12)	G-rich|Low_complexity|Low_complexity	43833	NM_145475	223753	Mm.222685	NM_145475	ENSMUSG00000035891	Cerk	AI848610|D330016D08Rik|mKIAA1646	ceramide kinase	protein-coding
common_peak2-24551-11-44--1.98315951207806-4.90496913713224	chr17	28232533	28233462	+	0	NA	Intergenic	Intergenic	-15413	NM_001085555	21463	Mm.29758	NM_013687	ENSMUSG00000062859	Tcp11	D17Ken1|Tcp-11	t-complex protein 11	protein-coding
common_peak2-20779-64-123--0.488749908678272-1.56756486921162	chr10	118867514	118869817	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	18165	NR_040578	67081	Mm.72644	NR_040578		1700025F24Rik	-	RIKEN cDNA 1700025F24 gene	ncRNA
common_peak2-22556-14-10-0.439784541720347-0.519648556297791	chr13	63071534	63072224	+	0	NA	intron (NM_001289926, intron 1 of 15)	L1MB4|LINE|L1	5626	NM_001289924	72061	Mm.188105	NM_028079	ENSMUSG00000021458	2010111I01Rik	2300006M17Rik|AP-O|Aopep	RIKEN cDNA 2010111I01 gene	protein-coding
common_peak2-24427-11-36--1.70075978137734-3.34305003325519	chr17	17838287	17839104	+	0	NA	Intergenic	Intergenic	-2210	NM_001104539	626942	Mm.404019	NM_001104539	ENSMUSG00000092120	Vmn2r90	EG626942	vomeronasal 2, receptor 90	protein-coding
common_peak2-31009-20-17-0.318149783148881-0.440610794044987	chr8	10946373	10947008	+	0	NA	Intergenic	Intergenic	-18233	NR_030715	665306	Mm.358758	NR_030715	ENSMUSG00000038917	3930402G23Rik	-	RIKEN cDNA 3930402G23 gene	ncRNA
unique_peak2-36669-5-6--0.511735258063458-0.947717972411649	chr3	30246379	30246730	+	0	NA	intron (NM_021442, intron 1 of 2)	intron (NM_021442, intron 1 of 2)	161855	NM_021442	14013	Mm.56965	NM_007963	ENSMUSG00000027684	Mecom	D630039M04Rik|Evi-1|Evi1|Jbo|Mds|Mds1|Mds1-Evi1|Prdm3|Znfpr1b1	MDS1 and EVI1 complex locus	protein-coding
common_peak1-9675-34-72--0.807756031878752-2.03570638876314	chr12	8674249	8675027	+	0	NA	Intergenic	Intergenic	-6302	NM_001160221	80913	Mm.341243	NM_030723	ENSMUSG00000020594	Pum2	5730503J23Rik|Pumm2|mKIAA0235	pumilio RNA-binding family member 2	protein-coding
common_peak1-15008-19-22--0.120874629395327-0.306080386793804	chr3	109340450	109341297	+	0	NA	intron (NM_020505, intron 15 of 26)	intron (NM_020505, intron 15 of 26)	-36052	NM_146139	57257	Mm.282257	NM_020505	ENSMUSG00000033721	Vav3	A530094I06Rik|AA986410|Idd18.1	vav 3 oncogene	protein-coding
unique_peak2-33503-6-9--0.75652998450706-1.11707584880836	chr11	73198640	73199057	+	0	NA	Intergenic	Intergenic	14100	NM_146922	258924	Mm.236410	NM_146922	ENSMUSG00000063881	Olfr376	MOR135-12	olfactory receptor 376	protein-coding
unique_peak1-2392-46-6-3.0906410211912-11.4370924890439	chr15	97572551	97574215	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-11547	NM_001168693	19011	Mm.1001	NM_008902	ENSMUSG00000022468	Endou	Pp11r|Tcl-30	endonuclease, polyU-specific	protein-coding
common_peak2-29264-24-35--0.376715098674596-0.470271536760928	chr5	140790915	140792034	+	0	NA	intron (NM_010752, intron 1 of 17)	B1_Mur4|SINE|Alu	6032	NM_010752	17120	Mm.27250	NM_010752	ENSMUSG00000029554	Mad1l1	AI173502|AW550425|Mad1	MAD1 mitotic arrest deficient 1-like 1	protein-coding
unique_peak2-39911-4-8--1.19338551529556-1.21878474469819	chrX	99150060	99150547	+	0	NA	intron (NM_001163610, intron 1 of 7)	ID4|SINE|ID	105579	NM_001163610	100042480	Mm.232	NM_001163610	ENSMUSG00000079481	Nhsl2	1110062M06Rik|6430511F03|AI225852|AW488865|EG621083|ENSMUSG00000073037|Gm10456	NHS-like 2	protein-coding
common_peak2-30971-77-64-0.762158766527543-2.97339374239787	chr8	126826513	126828650	+	0	NA	intron (NM_139272, intron 2 of 15)	intron (NM_139272, intron 2 of 15)	72287	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
common_peak1-8524-14-43--1.56021545827965-3.36245859328196	chr10	86021845	86022428	+	0	NA	Intergenic	Intergenic	-60495	NM_013722	27204	Mm.394931	NM_013722	ENSMUSG00000059602	Syn3	-	synapsin III	protein-coding
unique_peak2-39812-5-9--1.02630843089322-1.21398586181642	chrX	36328440	36328925	+	0	NA	Intergenic	L1Md_F2|LINE|L1	202725	NM_183126	77883	Mm.113311	NM_183126	ENSMUSG00000051361	6030498E09Rik	-	RIKEN cDNA 6030498E09 gene	protein-coding
common_peak2-31311-12-11-0.0638134843664826-0.337263207250336	chr8	78819074	78819806	+	0	NA	Intergenic	HERV16-int|LTR|ERVL	604632	NR_028579	100039211	Mm.367571	NR_028579	ENSMUSG00000074235	Gm10649	ENSMUSG00000074235	predicted gene 10649	ncRNA
common_peak2-21974-27-19-0.669617856007873-1.02859851787301	chr12	49389767	49390685	+	0	NA	Intergenic	Lx6|LINE|L1	-1093644	NM_001160112	15228	Mm.4704	NM_008241	ENSMUSG00000020950	Foxg1	2900064B05Rik|BF-1|Bf1|Hfh9|Hfhbf1	forkhead box G1	protein-coding
common_peak1-19111-50-31-1.04094031647895-3.10619360587017	chr9	75421317	75422841	+	0	NA	intron (NM_001038710, intron 9 of 9)	CYRA11_Mm|Unknown|Y-chromosome	-14615	NM_016963	50875	Mm.38445	NM_016963	ENSMUSG00000058587	Tmod3	U-Tmod|UTMOD	tropomodulin 3	protein-coding
common_peak2-20367-21-46--0.985099586411402-1.82819694957564	chr10	13192220	13193215	+	0	NA	intron (NM_001195065, intron 1 of 12)	intron (NM_001195065, intron 1 of 12)	1485	NM_001195065	215789	Mm.283359	NM_001033257	ENSMUSG00000062866	Phactr2	AV158170|BC012871	phosphatase and actin regulator 2	protein-coding
unique_peak1-1170-11-5-0.923731083530457-1.477227296591	chr11	99492632	99493060	+	0	NA	Intergenic	LTR16A|LTR|ERVL	-3293	NM_001048196	665891	Mm.394141	NM_001048196	ENSMUSG00000063251	Krtap4-1	A030010K20Rik	keratin associated protein 4-1	protein-coding
common_peak1-11072-15-7-1.01216475055566-1.08658567012551	chr15	58323964	58324751	+	0	NA	Intergenic	L2|LINE|L2	77334	NM_145959	210998	Mm.3224	NM_145959	ENSMUSG00000037119	D15Ertd621e	AV220772|BC033609|Fam91a1|SKIN|mKIAA0493	DNA segment, Chr 15, ERATO Doi 621, expressed	protein-coding
common_peak2-25757-5-12--1.40482005414695-1.62698961692433	chr19	29471119	29471649	+	0	NA	Intergenic	MIR|SINE|MIR	-14025	NM_021396	58205	Mm.116737	NM_021396		Pdcd1lg2	B7-DC|Btdc|F730015O22Rik|PD-L2	programmed cell death 1 ligand 2	protein-coding
common_peak1-16150-58-88--0.179783496075901-0.406403951062135	chr5	76139925	76141376	+	0	NA	Intergenic	Intergenic	169634	NM_021099	16590	Mm.247073	NM_021099	ENSMUSG00000005672	Kit	Bs|CD117|Fdc|Gsfsco1|Gsfsco5|Gsfsow3|SCO1|SCO5|SOW3|Ssm|Tr-kit|W|c-KIT	kit oncogene	protein-coding
unique_peak1-3268-7-0-2.79909083029819-2.40823996531185	chr18	69575570	69575888	+	0	NA	intron (NM_001083967, intron 3 of 19)	URR1A|DNA|MER1_type	70354	NM_001083967	21413	Mm.4269	NM_013685	ENSMUSG00000053477	Tcf4	5730422P05Rik|ASP-I2|E2-2|E2.2|ITF-2|ITF-2b|ITF2|ME2|MITF-2A|MITF-2B|SEF-2|SEF2|SEF2-1|TFE|Tcf-4|bHLHb19	transcription factor 4	protein-coding
common_peak2-23426-16-8-0.948338640825749-1.02063122982878	chr15	61610234	61610730	+	0	NA	Intergenic	GA-rich|Low_complexity|Low_complexity	-4476	NR_040350	432956	Mm.404918	NR_040350		D030024E09Rik	-	RIKEN cDNA D030024E09 gene	ncRNA
common_peak1-12202-18-17-0.142994149786039-0.353907621462753	chr17	33523542	33524306	+	0	NA	intron (NM_009542, intron 1 of 3)	intron (NM_009542, intron 1 of 3)	7658	NM_009542	22643	Mm.4417	NM_009542	ENSMUSG00000055240	Zfp101	AI316498|AI325003	zinc finger protein 101	protein-coding
common_peak1-18864-15-10-0.552733131918359-0.604422558181019	chr9	21592951	21593615	+	0	NA	intron (NM_145611, intron 3 of 11)	intron (NM_145611, intron 3 of 11)	9707	NM_145611	235041	Mm.257371	NM_145611	ENSMUSG00000032194	Kank2	AI504612|Ankrd25|BC010245	KN motif and ankyrin repeat domains 2	protein-coding
common_peak1-14674-24-29--0.113680692840802-0.304839791830752	chr3	61362629	61363631	+	0	NA	Intergenic	L1_Mur3|LINE|L1	194701	NM_028712	74012	Mm.422674	NM_028712	ENSMUSG00000036894	Rap2b	4021402C18Rik|AA408554	RAP2B, member of RAS oncogene family	protein-coding
unique_peak1-1528-10-1-2.35641534500877-2.57096726280955	chr13	14033378	14033863	+	0	NA	Intergenic	IAPLTR1a_Mm|LTR|ERVK	-13321	NM_178640	97884	Mm.21686	NM_178640	ENSMUSG00000039242	B3galnt2	A930105D20Rik|C80633|D230016N13Rik	UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	protein-coding
common_peak2-25605-29-15-1.11229008061511-2.08778000015696	chr19	8892495	8893491	+	0	NA	promoter-TSS (NM_001081196)	promoter-TSS (NM_001081196)	791	NM_027412	70387	Mm.261082	NM_027412	ENSMUSG00000071660	Ttc9c	2210019E14Rik|6330408J23Rik	tetratricopeptide repeat domain 9C	protein-coding
unique_peak1-1386-9-2-1.60465090568306-1.87199725847353	chr12	56522846	56523363	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	23292	NM_011968	26443	Mm.30210	NM_011968	ENSMUSG00000021024	Psma6	IOTA	proteasome (prosome, macropain) subunit, alpha type 6	protein-coding
unique_peak2-33581-7-6--0.00826409175941478-0.97990265578305	chr11	86648779	86649221	+	0	NA	Intergenic	MER90|LTR|ERV1	-27838	NM_026191	67487	Mm.260627	NM_026191	ENSMUSG00000018425	Dhx40	2410016C14Rik|ARG147|DDX40|PAD	DEAH (Asp-Glu-Ala-His) box polypeptide 40	protein-coding
common_peak1-10350-11-7-0.508693584251613-1.21681515183528	chr13	80940290	80941044	+	0	NA	Intergenic	Intergenic	-82016	NM_001042591	105171	Mm.423137	NM_001042591	ENSMUSG00000074794	Arrdc3	AI450344|mKIAA1376	arrestin domain containing 3	protein-coding
common_peak1-13556-25-20-0.469532482566345-0.662033714151238	chr2	5844394	5845282	+	0	NA	intron (NM_001081131, intron 5 of 16)	intron (NM_001081131, intron 5 of 16)	19000	NM_001081131	209692	Mm.222517	NM_001081131	ENSMUSG00000025815	Dhtkd1	C330018I04Rik	dehydrogenase E1 and transketolase domain containing 1	protein-coding
common_peak1-17006-40-48-0.0442658386358898-0.320773676263618	chr6	89412978	89414481	+	0	NA	intron (NM_001167736, intron 4 of 6)	intron (NM_001167736, intron 4 of 6)	-101122	NM_008881	18844	Mm.3789	NM_008881	ENSMUSG00000030084	Plxna1	2600013D04Rik|NOV|PlexA1|Plxn1|mKIAA4053	plexin A1	protein-coding
unique_peak1-2204-12-0-3.64877598508764-4.21441993929574	chr15	67138209	67138746	+	0	NA	intron (NR_045140, intron 5 of 8)	L1Md_A|LINE|L1	80146	NR_045140	69334	Mm.63770	NR_045140		1700012I11Rik	-	RIKEN cDNA 1700012I11 gene	ncRNA
common_peak1-13346-59-58-0.442720951510736-1.06587805992858	chr19	44283529	44285403	+	0	NA	intron (NM_024450, intron 1 of 5)	intron (NM_024450, intron 1 of 5)	6688	NM_024450	30049	Mm.480594	NM_024450	ENSMUSG00000025202	Scd3	4930513N16Rik	stearoyl-coenzyme A desaturase 3	protein-coding
unique_peak1-2072-8-1-2.00522241794757-2.05605744720049	chr15	36427705	36428122	+	0	NA	Intergenic	Arthur1|DNA|Tip100	-1367	NM_175134	68839	Mm.396537	NM_175134	ENSMUSG00000048307	Ankrd46	1110054N06Rik|AI314978|AI987733	ankyrin repeat domain 46	protein-coding
unique_peak2-35082-11-11--0.0762689164695427-0.301029995663976	chr16	17110786	17111220	+	0	NA	intron (NM_144954, intron 1 of 20)	intron (NM_144954, intron 1 of 20)	342	NM_001252445	66053	Mm.253614	NM_144954	ENSMUSG00000022771	Ppil2	0610009L05Rik|1700016N17Rik|4921520K19Rik|4930511F14Rik|AA589416|C130078A06Rik	peptidylprolyl isomerase (cyclophilin)-like 2	protein-coding
common_peak1-14929-11-22--1.0148683718054-1.11267835143409	chr3	101376968	101377587	+	0	NA	Intergenic	Intergenic	31353	NM_144900	11928	Mm.280103	NM_144900	ENSMUSG00000033161	Atp1a1	Atpa-1|BC010319	ATPase, Na+/K+ transporting, alpha 1 polypeptide	protein-coding
unique_peak2-38471-4-9--1.34538860874061-1.36011389749466	chr7	29238580	29239016	+	0	NA	intron (NM_001141921, intron 1 of 4)	intron (NM_001141921, intron 1 of 4)	1541	NM_001141921	80749	Mm.483073	NM_030562		Lrfn1	BC004018|SALM2|Semo1	leucine rich repeat and fibronectin type III domain containing 1	protein-coding
unique_peak1-7312-11-4-1.18676548936425-1.68134727924692	chr9	118396299	118396786	+	0	NA	Intergenic	Intergenic	9235	NM_010136	13813	Mm.200692	NM_010136	ENSMUSG00000032446	Eomes	C77258|TBR-2|Tbr2	eomesodermin homolog (Xenopus laevis)	protein-coding
unique_peak1-2068-26-12-1.22745937401737-2.03163221100073	chr15	34348961	34350437	+	0	NA	intron (NM_016762, intron 10 of 18)	intron (NM_016762, intron 10 of 18)	23281	NM_009083	19946	Mm.358632	NM_009083	ENSMUSG00000058600	Rpl30	-	ribosomal protein L30	protein-coding
common_peak1-18177-60-44-0.862438765290857-2.82877442536968	chr8	14887790	14889242	+	0	NA	promoter-TSS (NM_012000)	promoter-TSS (NM_012000)	-20	NM_012000	26889	Mm.254027	NM_012000	ENSMUSG00000026317	Cln8	mnd	ceroid-lipofuscinosis, neuronal 8	protein-coding
common_peak1-12496-94-147--0.0798637977796339-0.338107591505897	chr17	87445883	87447689	+	0	NA	Intergenic	Intergenic	21885	NM_019936	56724	Mm.109329	NM_019936	ENSMUSG00000024146	Cript	1200020A08Rik|AA589469	cysteine-rich PDZ-binding protein	protein-coding
common_peak2-28255-10-8-0.186490343566457-1.078512453669	chr4	126110467	126110894	+	0	NA	Intergenic	Intergenic	-3894	NM_153402	214150	Mm.440915	NM_153402		Ago3	AW048688|C130014L07Rik|Eif2c3	argonaute RISC catalytic subunit 3	protein-coding
unique_peak1-3606-25-6-2.0544949832875-3.87314773301527	chr19	32316155	32317325	+	0	NA	intron (NM_144792, intron 4 of 9)	intron (NM_144792, intron 4 of 9)	-31237	NM_001168526	208449	Mm.329810	NM_144792	ENSMUSG00000040451	Sgms1	9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23	sphingomyelin synthase 1	protein-coding
unique_peak2-38102-2-4--1.23938235115068-0.931118710592187	chr6	67162807	67163111	+	0	NA	Intergenic	ORR1A2|LTR|MaLR	-54014	NM_001113564	66870	Mm.240490	NM_025814	ENSMUSG00000036371	Serbp1	1200009K13Rik|9330147J08Rik|AL022786|Pairbp1	serpine1 mRNA binding protein 1	protein-coding
common_peak1-8395-16-29--0.788626953340457-0.98872314135509	chr10	67185625	67186330	+	0	NA	Intergenic	Intergenic	-174274	NM_001005419	211488	Mm.297250	NM_001005419	ENSMUSG00000057134	Ado	Gm237	2-aminoethanethiol (cysteamine) dioxygenase	protein-coding
common_peak2-29859-57-89--0.225820056250746-0.489563090914018	chr6	100286476	100287514	+	0	NA	Intergenic	MER91A|DNA|Tip100	-49643	NM_019743	56353	Mm.321633	NM_019743	ENSMUSG00000072872	Rybp	2410018J24Rik|DEDAF|YEAF1	RING1 and YY1 binding protein	protein-coding
common_peak2-23445-12-8-0.478850983645327-0.562038191119709	chr15	64185028	64185382	+	0	NA	intron (NM_001276467, intron 1 of 29)	intron (NM_001276467, intron 1 of 29)	29276	NM_001276461	13196	Mm.277236	NM_010026	ENSMUSG00000022377	Asap1	AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19	ArfGAP with SH3 domain, ankyrin repeat and PH domain1	protein-coding
common_peak1-18032-11-9-0.186765489364251-0.344532117358383	chr7	143517379	143518055	+	0	NA	Intergenic	L1_Mm|LINE|L1	23381	NR_040459	330664	Mm.127762	NR_040459		C230079O03Rik	C230079O03	RIKEN cDNA C230079O03 gene	ncRNA
common_peak2-24574-42-34-0.613046310922218-1.29674067475645	chr17	29614741	29615451	+	0	NA	Intergenic	Intergenic	-12894	NM_008842	18712	Mm.405293	NM_008842		Pim1	Pim-1	proviral integration site 1	protein-coding
unique_peak1-3777-8-3-1.00522241794757-1.39487600375387	chr19	55713169	55713529	+	0	NA	Intergenic	Intergenic	63345	NR_045318	77594	Mm.329924	NR_045318	ENSMUSG00000097632	4930552P12Rik	-	RIKEN cDNA 4930552P12 gene	ncRNA
unique_peak1-1676-7-1-1.79909083029819-1.80617997398389	chr13	70654888	70655338	+	0	NA	Intergenic	Intergenic	-57006	NR_045934	73584	Mm.442491	NR_045934		1700100L14Rik	-	RIKEN cDNA 1700100L14 gene	ncRNA
common_peak1-9903-12-10-0.189344366450341-0.386243247519795	chr12	86823637	86824268	+	0	NA	Intergenic	Intergenic	9101	NM_010234	14281	Mm.246513	NM_010234	ENSMUSG00000021250	Fos	D12Rfj1|c-fos|cFos	FBJ osteosarcoma oncogene	protein-coding
common_peak2-26119-44-25-1.12145311642744-3.08612073477863	chr2	6162902	6163689	+	0	NA	intron (NR_040333, intron 1 of 6)	intron (NR_040333, intron 1 of 6)	-29255	NM_024208	67856	Mm.38342	NM_024208	ENSMUSG00000039063	Echdc3	2310005D12Rik|AI662097	enoyl Coenzyme A hydratase domain containing 3	protein-coding
unique_peak1-3878-9-4-0.867685311516858-1.36011389749466	chr2	13390804	13391299	+	0	NA	intron (NM_001081084, intron 11 of 66)	MT2B|LTR|ERVL	22452	NM_001081084	65969	Mm.313915	NM_001081084	ENSMUSG00000026726	Cubn	AA408369|AL022750|D2Wsu88e	cubilin (intrinsic factor-cobalamin receptor)	protein-coding
common_peak2-24768-14-13-0.0918612383000403-0.332077462497413	chr17	56325997	56326478	+	0	NA	3' UTR (NM_172624, exon 21 of 21)	3' UTR (NM_172624, exon 21 of 21)	-2894	NM_080837	28106	Mm.294870	NM_080837		D17Wsu104e	Il25|Ly6elg	DNA segment, Chr 17, Wayne State University 104, expressed	protein-coding
unique_peak2-33622-6-9--0.75652998450706-1.11707584880836	chr11	96944205	96944698	+	0	NA	Intergenic	Intergenic	19369	NR_106181	102465893		NR_106181		Mir8103	mmu-mir-8103	microRNA mir-8103	ncRNA
common_peak2-27278-10-9-0.0344872501214071-1.05503135781948	chr3	57411875	57412292	+	0	NA	Intergenic	Intergenic	-32251	NM_001168281	97064	Mm.405029	NM_133784	ENSMUSG00000027803	Wwtr1	2310058J06Rik|2610021I22Rik|C78399|Taz	WW domain containing transcription regulator 1	protein-coding
common_peak2-27528-52-90--0.399534649932997-0.905069649695056	chr3	95818131	95819299	+	0	NA	intron (NM_013841, intron 14 of 14)	intron (NM_013841, intron 14 of 14)	-18953	NM_023320	67220	Mm.458147	NM_023320	ENSMUSG00000015745	Plekho1	2810052M02Rik|CKIP-1|Ckip1|JZA-20|Jza2	pleckstrin homology domain containing, family O member 1	protein-coding
common_peak1-18725-24-22-0.269647946710704-0.457753417732779	chr8	123224142	123225358	+	0	NA	Intergenic	Intergenic	32530	NM_001293559	12857	Mm.386758	NM_009941	ENSMUSG00000031818	Cox4i1	AL024441|COX|COX IV-1|COXIV|Cox4|Cox4a|IV-1	cytochrome c oxidase subunit IV isoform 1	protein-coding
common_peak2-21230-30-25-0.469235691350781-0.734130039933318	chr11	64079505	64080494	+	0	NA	Intergenic	Intergenic	-168835	NM_178870	15478	Mm.340214	NM_178870	ENSMUSG00000047759	Hs3st3a1	3Ost3a|Hs3st3a	heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1	protein-coding
common_peak1-7458-22-11-1.06232160436625-1.51503956548638	chr1	89571079	89571859	+	0	NA	intron (NR_122078, intron 5 of 27)	intron (NR_122078, intron 5 of 27)	54582	NM_001110193	16331	Mm.15105	NM_010566	ENSMUSG00000026288	Inpp5d	SHIP|SHIP-1|SHIP1|SIP-145|p150Ship|s-SHIP	inositol polyphosphate-5-phosphatase D	protein-coding
common_peak2-25932-13-9-0.456543935750406-0.53895475198017	chr19	46761599	46762236	+	0	NA	Intergenic	MTE2b|LTR|MaLR	-2479	NM_025563	66439	Mm.87163	NM_025563	ENSMUSG00000062376	2010012O05Rik	4930569L17Rik|AI413851|AI467257	RIKEN cDNA 2010012O05 gene	protein-coding
common_peak2-29501-5-6--0.511735258063458-0.947717972411649	chr6	33059882	33060206	+	0	NA	Intergenic	RMER19C|LTR|ERVK	-49892	NM_025336	66075	Mm.21501	NM_025336	ENSMUSG00000053768	Chchd3	0610041L09Rik|1700039J09Rik|AW558177	coiled-coil-helix-coiled-coil-helix domain containing 3	protein-coding
common_peak2-23518-12-12--0.0516637330534535-0.309718203022949	chr15	76879242	76879933	+	0	NA	intron (NM_028010, intron 3 of 4)	intron (NM_028010, intron 3 of 4)	1511	NM_013593	17189	Mm.404074	NM_013593	ENSMUSG00000018893	Mb	AI325109	myoglobin	protein-coding
common_peak1-9578-11-9-0.186765489364251-0.344532117358383	chr11	118365022	118365598	+	0	NA	intron (NM_001285438, intron 5 of 13)	intron (NM_001285438, intron 5 of 13)	27036	NM_172573	217364	Mm.473963	NM_172573	ENSMUSG00000033857	Engase	C130099A03|D230014K01Rik	endo-beta-N-acetylglucosaminidase	protein-coding
unique_peak2-37582-5-10--1.16381195464315-1.33892459842472	chr5	36713350	36713891	+	0	NA	intron (NM_030889, intron 1 of 26)	intron (NM_030889, intron 1 of 26)	27168	NM_030889	81840	Mm.34113	NM_030889	ENSMUSG00000029093	Sorcs2	N28137|mKIAA1329	sortilin-related VPS10 domain containing receptor 2	protein-coding
common_peak1-15105-66-93--0.0361051872517963-0.3022037702501	chr3	133309918	133311278	+	0	NA	Intergenic	Intergenic	-103244	NM_001040400	214133	Mm.347816	NM_145989	ENSMUSG00000040943	Tet2	Ayu17-449|E130014J05Rik|mKIAA1546	tet methylcytosine dioxygenase 2	protein-coding
common_peak2-24739-38-50--0.100972682672965-0.309893763698769	chr17	47957686	47958831	+	0	NA	intron (NM_001276390, intron 2 of 3)	intron (NM_001276390, intron 2 of 3)	11982	NM_001276391	17240	Mm.329100	NM_010783	ENSMUSG00000032717	Mdfi	I-mf|I-mfa	MyoD family inhibitor	protein-coding
common_peak2-32339-15-13-0.204809828498052-0.368541233333383	chrX	74425457	74426220	+	0	NA	Intergenic	L1Md_A|LINE|L1	-330728	NM_020601	21372	Mm.258476	NM_020601	ENSMUSG00000025246	Tbl1x	5330429M20|Tbl1	transducin (beta)-like 1 X-linked	protein-coding
common_peak2-21957-13-22--0.745089925419244-0.690311289528838	chr12	33147783	33148316	+	0	NA	Intergenic	L1_Mm|LINE|L1	84395	NM_001162903	72123	Mm.341352	NM_028111	ENSMUSG00000090946	Ccdc71l	2010109K11Rik|AV375874	coiled-coil domain containing 71 like	protein-coding
unique_peak1-506-14-5-1.31425365963649-1.4372489031793	chr1	181258322	181258944	+	0	NA	intron (NM_027188, intron 5 of 11)	B4A|SINE|B4	189501	NM_027188	69726	Mm.222338	NM_027188		Smyd3	2410008A19Rik|Zmynd1	SET and MYND domain containing 3	protein-coding
unique_peak2-35503-6-11--1.01956439034085-1.32595962126035	chr17	46751522	46752091	+	0	NA	intron (NM_175168, intron 1 of 19)	B3|SINE|B2	14647	NM_175168	71461	Mm.181833	NM_175168	ENSMUSG00000023972	Ptk7	8430404F20Rik|chz|mPTK7/CCK4	PTK7 protein tyrosine kinase 7	protein-coding
common_peak2-32140-21-30--0.384707045120639-0.446094173747089	chr9	107568544	107569659	+	0	NA	intron (NM_001199218, intron 1 of 15)	intron (NM_001199218, intron 1 of 15)	629	NM_023805	76257	Mm.296560	NM_023805	ENSMUSG00000010064	Slc38a3	0610012J02Rik|D9Ucla2|Nat1|Slc38-3|Sn1|Snat3|mNAT	solute carrier family 38, member 3	protein-coding
common_peak1-13787-12-9-0.326847890200276-0.459837087125828	chr2	38512180	38512588	+	0	NA	Intergenic	Intergenic	-12958	NM_011187	19177	Mm.389251	NM_011187	ENSMUSG00000026750	Psmb7	AU020723|MC14	proteasome (prosome, macropain) subunit, beta type 7	protein-coding
common_peak2-23179-22-60--1.28345323247548-3.52554618120705	chr15	38518385	38519809	+	0	NA	intron (NR_045757, intron 1 of 2)	MER21B|LTR|ERV1	5592	NR_045757	69679	Mm.416890	NR_045757		2310043O21Rik	-	RIKEN cDNA 2310043O21 gene	ncRNA
unique_peak2-39732-8-22--1.51833953810944-1.77631109801764	chr9	122294008	122294512	+	0	NA	intron (NR_045967, intron 2 of 2)	intron (NR_045967, intron 2 of 2)	13659	NR_045967	654800	Mm.393956	NR_045967		A730085K08Rik	-	RIKEN cDNA A730085K08 gene	ncRNA
unique_peak2-35837-4-5--0.608423014574403-0.909929411522249	chr18	67988647	67989074	+	0	NA	intron (NM_027556, intron 15 of 45)	intron (NM_027556, intron 15 of 45)	29099	NM_027556	70799	Mm.30857	NM_027556	ENSMUSG00000024542	Cep192	4631422C13Rik|D430014P18Rik	centrosomal protein 192	protein-coding
unique_peak2-36569-9-10--0.269818212233077-1.05503135781948	chr2	170153337	170153750	+	0	NA	Intergenic	B3A|SINE|B2	-28318	NR_040610	73303	Mm.443297	NR_040610	ENSMUSG00000086999	Bcas1os2	1700040N02Rik	breast carcinoma amplified sequence 1, opposite strand 2	ncRNA
common_peak1-10840-20-27--0.319280137466411-0.412012472183092	chr14	105802805	105803607	+	0	NA	Intergenic	Intergenic	-23570	NR_045859	71362	Mm.410781	NR_045859		5430440P10Rik	-	RIKEN cDNA 5430440P10 gene	ncRNA
unique_peak2-37442-4-6--0.830815435910851-0.989110657569874	chr4	155130314	155130857	+	0	NA	intron (NM_179203, intron 2 of 15)	B1_Mus2|SINE|Alu	4622	NM_179203	108888	Mm.241152	NM_179203	ENSMUSG00000029036	Atad3a	2400004H09Rik|Atad3|Tob3|mKIAA1273	ATPase family, AAA domain containing 3A	protein-coding
common_peak1-10892-10-7-0.356415345008769-1.12966497611638	chr15	89177912	89178418	+	0	NA	Intergenic	Intergenic	7925	NM_178919	105847	Mm.34511	NM_178919	ENSMUSG00000022614	Lmf2	AI451006|Tmem112b|Tmem153	lipase maturation factor 2	protein-coding
common_peak1-9476-25-21-0.402418286707809-0.580176690544129	chr11	106255255	106256422	+	0	NA	Intergenic	Intergenic	-11883	NM_010494	15896	Mm.394	NM_010494	ENSMUSG00000001029	Icam2	CD102|Icam-2|Ly-60	intercellular adhesion molecule 2	protein-coding
unique_peak2-37039-6-7--0.434601889619698-0.97990265578305	chr3	132790836	132791229	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	36115	NM_027927	71793	Mm.246726	NM_027927	ENSMUSG00000028016	Ints12	1110020M19Rik|2810027J24Rik|4930529N21Rik|A230056J18Rik|AI666778|Phf22	integrator complex subunit 12	protein-coding
unique_peak2-36990-0-5--3.42509343119537-1.32905871926422	chr3	121453391	121453809	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	27145	NM_010171	14066	Mm.273188	NM_010171	ENSMUSG00000028128	F3	AA409063|CD142|Cf-3|Cf3|TF	coagulation factor III	protein-coding
common_peak1-15995-59-81--0.0321880037455058-0.302378744963234	chr5	33334846	33336636	+	0	NA	3' UTR (NM_001170567, exon 43 of 43)	3' UTR (NM_001170567, exon 43 of 43)	-25724	NM_011738	22629	Mm.332314	NM_011738	ENSMUSG00000018965	Ywhah	-	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide	protein-coding
common_peak2-27003-11-21--0.950738034385684-0.991115276827166	chr2	170525877	170526543	+	0	NA	Intergenic	B4|SINE|B4	-31097	NM_029761	76829	Mm.41633	NM_029761	ENSMUSG00000027560	Dok5	2700055C10Rik	docking protein 5	protein-coding
unique_peak1-6127-7-2-1.21412832957703-1.45399745587252	chr6	129418815	129419273	+	0	NA	intron (NM_020008, intron 2 of 5)	intron (NM_020008, intron 2 of 5)	3751	NM_020008	56644	Mm.239516	NM_020008	ENSMUSG00000079293	Clec7a	BGR|Clecsf12|beta-GR	C-type lectin domain family 7, member a	protein-coding
common_peak1-18659-12-8-0.478850983645327-0.562038191119709	chr8	116943415	116943895	+	0	NA	intron (NM_001007223, intron 1 of 2)	intron (NM_001007223, intron 1 of 2)	1721	NM_001007223	403395	Mm.81117	NM_001007223		Clec3a	1110019O10Rik|Clecsf1|Gm796	C-type lectin domain family 3, member a	protein-coding
unique_peak2-39713-0-5--3.42509343119537-1.32905871926422	chr9	118553828	118554262	+	0	NA	intron (NM_133721, intron 4 of 27)	intron (NM_133721, intron 4 of 27)	38218	NM_133721	104099	Mm.335520	NM_133721	ENSMUSG00000039115	Itga9	(alpha)9|2610002H11Rik|6720458D17Rik|AI461869|D130073C02|D9Ertd428e	integrin alpha 9	protein-coding
common_peak1-17440-8-11--0.579740082773585-1.14218153353838	chr7	16294852	16295364	+	0	NA	Intergenic	Intergenic	-40611	NM_145709	252829	Mm.222738	NM_145709		Obox5	C87544	oocyte specific homeobox 5	protein-coding
common_peak2-23561-75-109--0.0422927217813749-0.305051298328157	chr15	79326980	79328471	+	0	NA	intron (NM_008427, intron 1 of 1)	B1F|SINE|Alu	7946	NM_008427	16520	Mm.140760	NM_008427	ENSMUSG00000044216	Kcnj4	IRK3|Kcnf2|MB-IRK3	potassium inwardly-rectifying channel, subfamily J, member 4	protein-coding
unique_peak1-2874-19-0-4.40268732666169-NA	chr17	35834974	35835665	+	0	NA	intron (NM_172962, intron 1 of 16)	intron (NM_172962, intron 1 of 16)	2216	NM_001198833	12305	Mm.5021	NM_007584	ENSMUSG00000003534	Ddr1	6030432F18|AI323681|CD167a|Cak|Nep|PTK3A	discoidin domain receptor family, member 1	protein-coding
unique_peak1-5501-19-5-1.81772482594053-2.59995804677862	chr5	135950779	135951577	+	0	NA	intron (NM_146001, intron 1 of 30)	MTD-int|LTR|MaLR	69814	NM_146001	215114	Mm.280805	NM_146001	ENSMUSG00000039959	Hip1	2610109B09Rik|A930014B11Rik|E130315I21Rik|mKIAA4113	huntingtin interacting protein 1	protein-coding
unique_peak1-734-12-2-2.06381348436648-2.79529063155376	chr10	98864404	98865069	+	0	NA	Intergenic	Intergenic	138871	NM_026268	67603	Mm.1791	NM_026268	ENSMUSG00000019960	Dusp6	1300019I03Rik|MKP-3|MKP3|PYST1	dual specificity phosphatase 6	protein-coding
unique_peak1-7156-13-0-3.77847203063777-4.51544993495972	chr9	58079490	58080046	+	0	NA	intron (NM_178087, intron 4 of 8)	intron (NM_178087, intron 4 of 8)	10811	NR_105806	102466639		NR_105806	miRBase:MI0021916	Mir6385	mmu-mir-6385	microRNA mir-6385	ncRNA
unique_peak2-32591-11-8-0.338768582809301-1.14218153353838	chr1	90164205	90164630	+	0	NA	intron (NR_040291, intron 2 of 4)	intron (NR_040291, intron 2 of 4)	1566	NR_040291	78605	Mm.384762	NR_040291		6430706D22Rik	-	RIKEN cDNA 6430706D22 gene	ncRNA
common_peak1-12617-10-7-0.356415345008769-1.12966497611638	chr18	32055406	32055878	+	0	NA	intron (NM_028866, intron 17 of 21)	B1_Mur2|SINE|Alu	15915	NM_026006	67158	Mm.31537	NM_026006	ENSMUSG00000044982	Sft2d3	2610206C24Rik|AI847965|AW046173	SFT2 domain containing 3	protein-coding
common_peak2-29788-23-24-0.0779113147343562-0.318406410381916	chr6	89413061	89413818	+	0	NA	intron (NM_001167736, intron 4 of 6)	intron (NM_001167736, intron 4 of 6)	-100832	NM_008881	18844	Mm.3789	NM_008881	ENSMUSG00000030084	Plxna1	2600013D04Rik|NOV|PlexA1|Plxn1|mKIAA4053	plexin A1	protein-coding
common_peak1-13700-52-54-0.326900276741039-0.699241046598679	chr2	30415139	30416980	+	0	NA	Intergenic	Intergenic	-34505	NM_030137	78617	Mm.40413	NM_030137	ENSMUSG00000047363	Cstad	9530039B02Rik	CSA-conditional, T cell activation-dependent protein	protein-coding
unique_peak2-36809-3-5--0.998945590680433-0.96108193396963	chr3	84428375	84428769	+	0	NA	Intergenic	Intergenic	31076	NM_207278	403175	Mm.83086	NM_207278	ENSMUSG00000047819	Tigd4	C130063O11Rik|Gm418	tigger transposable element derived 4	protein-coding
common_peak2-26297-86-102-0.289135266849135-0.850630095476683	chr2	32151004	32152044	+	0	NA	intron (NM_133852, intron 3 of 26)	intron (NM_133852, intron 3 of 26)	7751	NM_001080968	99412	Mm.106376	NM_133852	ENSMUSG00000002546	Golga2	AW555139|GM130|mKIAA4150	golgi autoantigen, golgin subfamily a, 2	protein-coding
common_peak1-14296-23-17-0.551842503066768-0.713114929964887	chr2	158510367	158511289	+	0	NA	intron (NM_001159662, intron 1 of 10)	intron (NM_001159662, intron 1 of 10)	17957	NM_001159662	228852	Mm.150540	NM_153089	ENSMUSG00000037754	Ppp1r16b	ANKRD4|C130078N17Rik|TIMAP|Wdt4	protein phosphatase 1, regulatory (inhibitor) subunit 16B	protein-coding
unique_peak2-35529-10-11--0.228547155712387-0.31137425193576	chr17	53521276	53521868	+	0	NA	Intergenic	L1_Mur1|LINE|L1	81074	NM_172497	211482	Mm.60887	NM_172497	ENSMUSG00000023931	Efhb	4921525D22Rik	EF hand domain family, member B	protein-coding
common_peak1-17640-33-61--0.622858747861346-1.25612039445446	chr7	49601673	49602808	+	0	NA	Intergenic	RLTR25B|LTR|ERVK	83499	NR_028441	628490	Mm.246518	NR_028441	ENSMUSG00000070621	Vmn2r-ps60	Casr-rs4|Gprc2a-rs4	vomeronasal 2, receptor, pseudogene 60	pseudo
unique_peak2-33792-7-8--0.370834171144123-1.00793137938329	chr11	120188885	120189374	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	19598	NR_105900	102465564		NR_105900		Mir6935	mmu-mir-6935	microRNA mir-6935	ncRNA
unique_peak1-6227-9-1-2.18961340640422-2.31132995230379	chr7	4166888	4167334	+	0	NA	Intergenic	Intergenic	-22245	NM_001081239	232801	Mm.258061	NM_001081239	ENSMUSG00000070873	Lilra5	E030017K20|EG232801|Gm4878|Lilrc1	leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5	protein-coding
common_peak2-29408-18-26--0.441968350935117-0.471456499375593	chr6	127057568	127058300	+	0	NA	intron (NM_177003, intron 1 of 5)	intron (NM_177003, intron 1 of 5)	1636	NM_177003	319801	Mm.101836	NM_177003	ENSMUSG00000038028	9630033F20Rik	AA793651|AI595337|C79710|C85509|Tigar	RIKEN cDNA 9630033F20 gene	protein-coding
common_peak2-20987-54-53-0.418198259466266-0.930588659547694	chr11	22512056	22513001	+	0	NA	Intergenic	Intergenic	100242	NM_153596	103765	Mm.221274	NM_153596	ENSMUSG00000049904	Tmem17	AI503894|AW049890	transmembrane protein 17	protein-coding
common_peak1-17716-8-4-0.683294323060208-1.21878474469819	chr7	79392134	79392613	+	0	NA	intron (NM_001024703, intron 2 of 22)	intron (NM_001024703, intron 2 of 22)	59108	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding
unique_peak2-37439-7-11--0.785871670422967-1.21681515183528	chr4	154964062	154964660	+	0	NA	3' UTR (NM_001159637, exon 12 of 12)	3' UTR (NM_001159637, exon 12 of 12)	-11164	NM_177186	320541	Mm.306018	NM_177186	ENSMUSG00000042202	Slc35e2	A530082C11Rik|AI957035	solute carrier family 35, member E2	protein-coding
unique_peak2-36134-2-5--1.50241675698448-1.08602067057793	chr2	14620104	14620517	+	0	NA	intron (NM_023116, intron 2 of 13)	RLTR31_Mm|LTR|ERVK	-21959	NR_028497	625342	Mm.484784	NR_028497		Gm13315	OTTMUSG00000011384	lactate dehydrogenase A pseudogene	pseudo
unique_peak2-35738-1-6--2.43441193227435-1.56314192529759	chr18	36513967	36514308	+	0	NA	intron (NM_001081365, intron 1 of 2)	intron (NM_001081365, intron 1 of 2)	5859	NM_001081365	66060	Mm.272527	NM_001081365		Cystm1	0610010O12Rik	cysteine-rich transmembrane module containing 1	protein-coding
unique_peak2-37692-1-7--2.62705701021674-1.80617997398389	chr5	100005815	100006235	+	0	NA	intron (NR_030692, intron 1 of 3)	intron (NR_030692, intron 1 of 3)	152054	NR_030692	319818	Mm.295233	NR_030692	ENSMUSG00000089809	A930011G23Rik	-	RIKEN cDNA A930011G23 gene	ncRNA
common_peak1-18015-21-24--0.0743669245084888-0.301029995663979	chr7	141447091	141447984	+	0	NA	Intergenic	Intergenic	-30757	NM_007400	11489	Mm.439714	NM_007400	ENSMUSG00000054555	Adam12	Mltna|mKIAA4001	a disintegrin and metallopeptidase domain 12 (meltrin alpha)	protein-coding
unique_peak1-150-7-1-1.79909083029819-1.80617997398389	chr1	72009413	72009800	+	0	NA	intron (NR_040454, intron 2 of 2)	intron (NR_040454, intron 2 of 2)	42163	NR_040454	71134	Mm.370574	NR_040454		4933417E11Rik	-	RIKEN cDNA 4933417E11 gene	ncRNA
common_peak1-17231-57-55-0.458678118021325-1.10096426460187	chr6	127453228	127454479	+	0	NA	Intergenic	Intergenic	50112	NM_181402	101187	Mm.110818	NM_181402	ENSMUSG00000037997	Parp11	5330431N24Rik|AI851877|ARTD11|HIN1L	poly (ADP-ribose) polymerase family, member 11	protein-coding
common_peak2-21497-19-36--0.806766038967264-1.16836819221353	chr11	88999337	89000340	+	0	NA	Intergenic	MLT1C|LTR|MaLR	64683	NM_001033266	217071	Mm.342127	NM_001033266	ENSMUSG00000072553	Gm525	-	predicted gene 525	protein-coding
common_peak1-8383-45-44-0.368504929015197-0.719613425717097	chr10	62449097	62450278	+	0	NA	intron (NM_027425, intron 2 of 17)	intron (NM_027425, intron 2 of 17)	6716	NM_027425	70432	Mm.234587	NM_027425		Rufy2	2610111M19Rik|AI844453|Denn|LZ-FYVE|ZFYVE13	RUN and FYVE domain-containing 2	protein-coding
common_peak2-24259-5-13--1.51173525806346-1.78669045979184	chr16	92687193	92687733	+	0	NA	intron (NM_001111022, intron 4 of 6)	intron (NM_001111022, intron 4 of 6)	10111	NM_001111023	12394	Mm.4081	NM_009821	ENSMUSG00000022952	Runx1	AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b	runt related transcription factor 1	protein-coding
common_peak2-27665-10-13--0.450939577048835-0.386243247519795	chr3	108910152	108910968	+	0	NA	intron (NM_029054, intron 6 of 9)	intron (NM_029054, intron 6 of 9)	-15507	NM_172685	229731	Mm.33574	NM_172685	ENSMUSG00000040322	Slc25a24	2610016M12Rik	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24	protein-coding
unique_peak1-1718-6-4-0.24347001549294-0.989110657569874	chr13	95443633	95444059	+	0	NA	Intergenic	Intergenic	-115052	NM_009321	21371	Mm.379025	NM_009321	ENSMUSG00000042043	Tbca	Tbca13	tubulin cofactor A	protein-coding
common_peak1-12957-32-20-0.886774596440899-1.65365064026544	chr19	55230125	55231492	+	0	NA	Intergenic	Intergenic	-24567	NM_009348	21684	Mm.42139	NM_009348	ENSMUSG00000024979	Tectb	Tctnb	tectorin beta	protein-coding
common_peak1-17318-50-64-0.018572503450498-0.307711712824847	chr6	145249533	145250865	+	0	NA	Intergenic	MTEa|LTR|MaLR	51127	NR_045598	100039495	Mm.121014	NR_045598	ENSMUSG00000086013	Gm15706	OTTMUSG00000025463	predicted gene 15706	ncRNA
common_peak2-32305-11-15--0.491306415748387-0.435191258261915	chrX	47912375	47912888	+	0	NA	intron (NR_026976, intron 22 of 23)	(TATG)n|Simple_repeat|Simple_repeat	75804	NR_015505	103012	Mm.482523	NR_015505		Firre	5830467J12Rik|6720401G13Rik|AW048145	functional intergenic repeating RNA element	ncRNA
unique_peak1-3680-9-2-1.60465090568306-1.87199725847353	chr19	42125338	42125799	+	0	NA	intron (NM_026152, intron 1 of 6)	B1_Mus2|SINE|Alu	-1150	NM_025752	66765	Mm.440412	NM_025752	ENSMUSG00000090369	4933411K16Rik	-	RIKEN cDNA 4933411K16 gene	protein-coding
unique_peak2-35350-2-6--1.72480917832092-1.26211192963361	chr17	25222470	25222899	+	0	NA	intron (NM_134126, intron 18 of 29)	intron (NM_134126, intron 18 of 29)	-4625	NM_001001183	407831	Mm.34379	NM_001001183	ENSMUSG00000024168	Tmem204	-	transmembrane protein 204	protein-coding
common_peak2-26392-138-147-0.58621745906744-3.63437781900346	chr2	52741372	52742894	+	0	NA	intron (NM_172409, intron 1 of 26)	Lx6|LINE|L1	25231	NM_172409	71409	Mm.394427	NM_172409	ENSMUSG00000036053	Fmnl2	5430425K04Rik|Man	formin-like 2	protein-coding
common_peak2-22138-22-23-0.0623216043662485-0.319130838712456	chr12	85957803	85958571	+	0	NA	intron (NM_008992, intron 1 of 18)	intron (NM_008992, intron 1 of 18)	229	NM_008992	19300	Mm.229109	NM_008992	ENSMUSG00000021240	Abcd4	P69r|P70R|Pxmp1l	ATP-binding cassette, sub-family D (ALD), member 4	protein-coding
unique_peak2-38188-5-4--0.0263084308932156-0.909929411522249	chr6	98746941	98747329	+	0	NA	Intergenic	Intergenic	231157	NM_001197322	108655	Mm.234965	NM_053202	ENSMUSG00000030067	Foxp1	3110052D19Rik|4932443N09Rik|AI461938|AW494214	forkhead box P1	protein-coding
common_peak1-10069-56-57-0.377614830311671-0.835692031846851	chr13	23368203	23369362	+	0	NA	Intergenic	Intergenic	-1437	NR_046038	74061	Mm.399501	NR_046038	ENSMUSG00000085122	4933404K08Rik	-	RIKEN cDNA 4933404K08 gene	ncRNA
unique_peak1-2819-10-0-3.35641534500877-3.31132995230379	chr17	26567399	26567860	+	0	NA	intron (NM_001081656, intron 1 of 4)	intron (NM_001081656, intron 1 of 4)	15719	NM_001081656	240055	Mm.133211	NM_001081656	ENSMUSG00000034413	Neurl1b	C230078M08Rik|EG240055	neuralized homolog 1b (Drosophila)	protein-coding
common_peak2-29622-6-12--1.13504160776079-1.45089835786865	chr6	54362991	54363634	+	0	NA	intron (NR_033635, intron 1 of 13)	MLT1A1|LTR|MaLR	16903	NR_033635	100042056	Mm.448157	NM_198118	ENSMUSG00000073067	9130019P16Rik	6430501H15Rik|OTTMUSG00000023151	RIKEN cDNA 9130019P16 gene	ncRNA
common_peak1-15367-24-34--0.33607311417725-0.427313034957882	chr4	59189029	59190015	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-12900	NM_011673	22234	Mm.198803	NM_011673	ENSMUSG00000028381	Ugcg	AU043821|C80537|Epcs21|GlcT-1|Ugcgl	UDP-glucose ceramide glucosyltransferase	protein-coding
unique_peak2-35945-6-6--0.241956811677302-0.947717972411649	chr19	10182939	10183168	+	0	NA	Intergenic	Intergenic	-7060	NM_019699	56473	Mm.38901	NM_019699	ENSMUSG00000024665	Fads2	2900042M13Rik|Fadsd2	fatty acid desaturase 2	protein-coding
common_peak2-28466-12-14--0.25811461052088-0.309074325783021	chr4	152325826	152326332	+	0	NA	Intergenic	Intergenic	254430	NR_033138	330004	Mm.291863	NM_001033414		Gm833	-	predicted gene 833	ncRNA
common_peak2-20306-97-141-0.0342539519875995-0.313178489136279	chr1	195241496	195242059	+	0	NA	Intergenic	Intergenic	-45301	NM_144817	215303	Mm.40329	NM_144817	ENSMUSG00000016179	Camk1g	CLICK-III|CaMKIgamma	calcium/calmodulin-dependent protein kinase I gamma	protein-coding
common_peak1-7718-25-46--0.692738946332532-1.14508711250721	chr1	88008060	88008862	+	0	NA	promoter-TSS (NM_008311)	promoter-TSS (NM_008311)	84	NM_008311	15559	Mm.439747	NM_008311	ENSMUSG00000026228	Htr2b	5-HT2B|AJ012488|AV377389	5-hydroxytryptamine (serotonin) receptor 2B	protein-coding
common_peak2-22493-10-26--1.3984721571547-1.90052685918624	chr13	51202601	51203087	+	0	NA	intron (NM_001283029, intron 1 of 5)	intron (NM_001283029, intron 1 of 5)	5928	NM_001283029	20729	Mm.188432	NM_011462	ENSMUSG00000021395	Spin1	Spin	spindlin 1	protein-coding
unique_peak1-2533-9-6-0.382258484346616-1.11707584880836	chr16	21284953	21285505	+	0	NA	intron (NR_046162, intron 1 of 4)	intron (NR_046162, intron 1 of 4)	11716	NR_046162	328646	Mm.404748	NR_046162	ENSMUSG00000096918	Gm16863	A830060N17	predicted gene, 16863	ncRNA
unique_peak1-2325-9-2-1.60465090568306-1.87199725847353	chr15	83407713	83408235	+	0	NA	intron (NM_183017, intron 13 of 13)	B3A|SINE|B2	13971	NM_009775	12257	Mm.1508	NM_009775	ENSMUSG00000041736	Tspo	Bzrp|IBP|PBR|Tspo1	translocator protein	protein-coding
unique_peak2-36030-2-6--1.72480917832092-1.26211192963361	chr19	43498781	43499196	+	0	NA	Intergenic	B3A|SINE|B2	-15938	NM_031396	83674	Mm.329864	NM_031396	ENSMUSG00000025189	Cnnm1	AI846314|Acdp1|CLP-1	cyclin M1	protein-coding
unique_peak2-37412-6-7--0.434601889619698-0.97990265578305	chr4	147848546	147848961	+	0	NA	intron (NM_020009, intron 19 of 57)	RSINE1|SINE|B4	25818	NM_001039554	654812	Mm.388929	NM_001039554	ENSMUSG00000028989	Angptl7	-	angiopoietin-like 7	protein-coding
unique_peak1-5727-10-3-1.35641534500877-1.75805390616669	chr6	43264249	43264786	+	0	NA	Intergenic	RSINE1|SINE|B4	-4964	NM_130869	18291	Mm.17715	NM_130869	ENSMUSG00000029736	Nobox	OG2|Og2x	NOBOX oogenesis homeobox	protein-coding
common_peak1-10981-112-80-1.09340029743566-7.90130184180637	chr15	31600870	31602840	+	0	NA	Intergenic	Intergenic	69984	NM_026546	68073	Mm.119185	NM_026546	ENSMUSG00000039065	Fam173b	A930016P21Rik|AA987072	family with sequence similarity 173, member B	protein-coding
unique_peak2-34439-6-4-0.24347001549294-0.989110657569874	chr14	21304842	21305229	+	0	NA	intron (NM_029104, intron 4 of 6)	L1Md_F2|LINE|L1	-5680	NM_009674	11750	Mm.280231	NM_009674	ENSMUSG00000021814	Anxa7	AI265384|AI316497|Anx7|synexin	annexin A7	protein-coding
common_peak1-18423-8-10--0.454209200689727-1.078512453669	chr8	77133639	77134088	+	0	NA	Intergenic	L1Md_A|LINE|L1	-263210	NM_027837	71597	Mm.158735	NM_027837	ENSMUSG00000031621	Isx	9130012O13Rik|Pix-1	intestine specific homeobox	protein-coding
common_peak1-12902-33-31-0.331337562525529-0.549429090733244	chr18	82855579	82857154	+	0	NA	intron (NM_177832, intron 1 of 29)	T-rich|Low_complexity|Low_complexity	5760	NM_177832	329002	Mm.34438	NM_177832	ENSMUSG00000041258	Zfp236	AI447957|Gm335	zinc finger protein 236	protein-coding
unique_peak1-1544-12-3-1.64877598508764-2.36932189928148	chr13	21467959	21468536	+	0	NA	Intergenic	Intergenic	13558	NM_016684	22758	Mm.24124	NM_016684	ENSMUSG00000036721	Zscan12	2510038J07Rik|FPM315|Zfp96|mKIAA0426	zinc finger and SCAN domain containing 12	protein-coding
common_peak2-22198-17-16-0.130833496954699-0.356936432242225	chr12	110737858	110738608	+	0	NA	Intergenic	Intergenic	-40973	NR_027652	17263	Mm.289645	NM_144513	ENSMUSG00000021268	Meg3	2900016C05Rik|3110050O07Rik|6330408G06Rik|AI425946|AW108224|D12Bwg1266e|Gtl2|R74756|R75394	maternally expressed 3	ncRNA
unique_peak1-3857-15-7-1.01216475055566-1.08658567012551	chr2	6352668	6353433	+	0	NA	intron (NM_181399, intron 13 of 13)	intron (NM_181399, intron 13 of 13)	79268	NM_181399	98910	Mm.40673	NM_181399	ENSMUSG00000039046	Usp6nl	AI316785|RNTRE|TRE2NL|mKIAA0019	USP6 N-terminal like	protein-coding
common_peak1-10969-17-18--0.0296311752385474-0.306899554715732	chr15	27992084	27992947	+	0	NA	Intergenic	Intergenic	-36912	NM_001081302	223435	Mm.485422	NM_001081302	ENSMUSG00000022263	Trio	6720464I07Rik|AA408740|Solo	triple functional domain (PTPRF interacting)	protein-coding
unique_peak2-37635-3-5--0.998945590680433-0.96108193396963	chr5	73501209	73501614	+	0	NA	intron (NM_028194, intron 16 of 62)	intron (NM_028194, intron 16 of 62)	103268	NM_173403	231290	Mm.491387	NM_173403		Slc10a4	E130304D01	solute carrier family 10 (sodium/bile acid cotransporter family), member 4	protein-coding
common_peak2-24007-12-8-0.478850983645327-0.562038191119709	chr16	20801336	20801712	+	0	NA	Intergenic	HAL1|LINE|L1	-66940	NM_009379	21832	Mm.3943	NM_009379	ENSMUSG00000022847	Thpo	Mgdf|Ml|Mpllg|Tpo	thrombopoietin	protein-coding
common_peak2-27116-12-21--0.810655633549659-0.713635438203849	chr3	14578465	14579133	+	0	NA	5' UTR (NM_007892, exon 1 of 8)	5' UTR (NM_007892, exon 1 of 8)	128	NM_007892	13559	Mm.153415	NM_007892	ENSMUSG00000027552	E2f5	AU024671|E2F-5	E2F transcription factor 5	protein-coding
common_peak2-20194-125-126-0.635140692287385-3.71783912083045	chr1	173912373	173914587	+	0	NA	Intergenic	PB1D10|SINE|Alu	43919	NM_033509	93840	Mm.36148	NM_033509	ENSMUSG00000026556	Vangl2	C530001F03Rik|Lp|Lpp1|Ltap|Vang1l2|loop-tail|ska17|ska<m17Jus>|stbm|strabismus	vang-like 2 (van gogh, Drosophila)	protein-coding
common_peak2-28734-12-11-0.0638134843664826-0.337263207250336	chr5	36483567	36484231	+	0	NA	intron (NM_030889, intron 3 of 26)	intron (NM_030889, intron 3 of 26)	-62771	NM_175249	76943	Mm.44242	NM_175249	ENSMUSG00000043430	Psapl1	2310020A21Rik	prosaposin-like 1	protein-coding
common_peak2-20130-12-9-0.326847890200276-0.459837087125828	chr1	165768783	165769295	+	0	NA	intron (NM_010629, intron 10 of 20)	B1_Mus2|SINE|Alu	59229	NM_010629	16579	Mm.4651	NM_010629	ENSMUSG00000026585	Kifap3	KAP3|SMAP	kinesin-associated protein 3	protein-coding
common_peak1-15697-8-12--0.695217300193522-0.475924844171029	chr4	139574503	139575087	+	0	NA	Intergenic	MERVL_2A-int|LTR|ERVL	-50854	NM_173427	242721	Mm.60400	NM_173427	ENSMUSG00000078234	Klhdc7a	B230308G19Rik	kelch domain containing 7A	protein-coding
common_peak1-8334-21-12-0.869049547125143-1.18646456559501	chr10	44015983	44016871	+	0	NA	intron (NM_053069, intron 4 of 7)	intron (NM_053069, intron 4 of 7)	28263	NM_053069	11793	Mm.22264	NM_053069	ENSMUSG00000038160	Atg5	2010107M05Rik|3110067M24Rik|AW319544|Apg5l|Atg5l|C88337|Paddy	autophagy related 5	protein-coding
common_peak1-8760-55-77--0.0807823477095466-0.313973398029927	chr11	5740389	5741584	+	0	NA	Intergenic	LTRIS2|LTR|ERV1	-2967	NM_017401	54125	Mm.260194	NM_017401	ENSMUSG00000020474	Polm	AI462166|B230309I03Rik|Tdt-N	polymerase (DNA directed), mu	protein-coding
unique_peak2-33578-5-8--0.874305337448166-1.10484139239135	chr11	86598821	86599286	+	0	NA	intron (NM_026191, intron 11 of 17)	intron (NM_026191, intron 11 of 17)	22109	NM_026191	67487	Mm.260627	NM_026191	ENSMUSG00000018425	Dhx40	2410016C14Rik|ARG147|DDX40|PAD	DEAH (Asp-Glu-Ala-His) box polypeptide 40	protein-coding
unique_peak2-38064-51-86--0.368019670246155-0.814709005062661	chr6	47747930	47749566	+	0	NA	intron (NM_009787, intron 8 of 9)	intron (NM_009787, intron 8 of 9)	4903	NR_030485	735289		NR_030485		Mir704	Mirn704|mmu-mir-704	microRNA 704	ncRNA
unique_peak1-4044-9-0-3.18961340640422-3.01029995663981	chr2	59439554	59439985	+	0	NA	Intergenic	Intergenic	-10330	NM_198294	66860	Mm.27917	NM_198294	ENSMUSG00000035168	Tanc1	1200003E16Rik|Tanc|mKIAA1728	tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1	protein-coding
common_peak2-22889-13-18--0.469455482805817-0.409888142029227	chr14	31963767	31964461	+	0	NA	intron (NM_138672, intron 30 of 68)	intron (NM_138672, intron 30 of 68)	16075	NM_027289	70021	Mm.261681	NM_027289	ENSMUSG00000071547	Nt5dc2	2510015F01Rik	5'-nucleotidase domain containing 2	protein-coding
unique_peak2-39384-4-5--0.608423014574403-0.909929411522249	chr9	21451786	21452171	+	0	NA	intron (NM_011417, intron 12 of 33)	intron (NM_011417, intron 12 of 33)	31365	NM_001174078	20586	Mm.286593	NM_011417	ENSMUSG00000032187	Smarca4	Brg1|HP1-BP72|SNF2beta|SW1/SNF|b2b508.1Clo|b2b692Clo	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4	protein-coding
unique_peak2-34250-8-6-0.197867495889966-1.03789460276074	chr13	59584495	59584911	+	0	NA	intron (NM_001284219, intron 16 of 24)	(CA)n|Simple_repeat|Simple_repeat	61109	NM_001284221	67269	Mm.153008	NM_023328	ENSMUSG00000021557	Agtpbp1	1700020N17Rik|2310001G17Rik|2900054O13Rik|4930445M19Rik|5730402G09Rik|CCP1|Nna1|nmf243|pcd	ATP/GTP binding protein 1	protein-coding
common_peak1-17710-22-23-0.0623216043662485-0.319130838712456	chr7	79148090	79149128	+	0	NA	Intergenic	Intergenic	302872	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding
common_peak2-25014-35-38-0.145968039600255-0.368093376636814	chr18	20895449	20896380	+	0	NA	intron (NM_019737, intron 1 of 8)	ID_B1|SINE|B4	8991	NM_019737	56386	Mm.393827	NM_019737	ENSMUSG00000056124	B4galt6	AA536803|AU022389	UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 6	protein-coding
unique_peak1-2038-18-3-2.31291915122835-3.35694334496952	chr15	25644775	25645598	+	0	NA	intron (NM_019472, intron 4 of 40)	intron (NM_019472, intron 4 of 40)	92881	NM_019472	17909	Mm.60590	NM_019472	ENSMUSG00000022272	Myo10	AW048724|D15Ertd600e|mKIAA0799	myosin X	protein-coding
unique_peak1-5169-14-0-3.89921616035764-4.8164799306237	chr5	28563048	28563593	+	0	NA	intron (NM_175651, intron 1 of 2)	RLTR25A|LTR|ERVK	1093	NM_175651	269637	Mm.68286	NM_175651	ENSMUSG00000044681	Cnpy1	1500012D20Rik|9630008K15Rik|AI853839	canopy 1 homolog (zebrafish)	protein-coding
unique_peak1-3493-10-1-2.35641534500877-2.57096726280955	chr19	11379944	11380498	+	0	NA	Intergenic	Intergenic	-21918	NM_183190	269063	Mm.268940	NM_183190	ENSMUSG00000054523	Ms4a5	-	membrane-spanning 4-domains, subfamily A, member 5	protein-coding
unique_peak1-634-9-2-1.60465090568306-1.87199725847353	chr10	37266741	37267212	+	0	NA	Intergenic	Lx3A|LINE|L1	-408244	NM_008538	17118	Mm.30059	NM_008538	ENSMUSG00000069662	Marcks	Macs|PKCSL	myristoylated alanine rich protein kinase C substrate	protein-coding
common_peak2-24748-83-145--0.275601933773891-0.771883630780981	chr17	51178088	51179802	+	0	NA	intron (NM_001285991, intron 2 of 22)	Lx3_Mus|LINE|L1	119758	NM_001285993	72238	Mm.120650	NM_028162	ENSMUSG00000023923	Tbc1d5	1600014N05Rik	TBC1 domain family, member 5	protein-coding
common_peak1-12853-14-15--0.100783839642355-0.301029995663982	chr18	75300018	75300713	+	0	NA	intron (NM_027727, intron 13 of 16)	B4A|SINE|B4	121939	NM_027727	69190	Mm.173826	NM_027727	ENSMUSG00000035765	Dym	1810041M12Rik|4933427L07Rik|C030019K18Rik	dymeclin	protein-coding
common_peak2-29411-60-104--0.359953656045591-0.867404747169945	chr6	135362896	135366051	+	0	NA	Intergenic	B4A|SINE|B4	46962	NM_001288627	13730	Mm.182785	NM_010128	ENSMUSG00000030208	Emp1	I-8-09|TMP	epithelial membrane protein 1	protein-coding
unique_peak1-3200-24-9-1.47128180788035-2.52428350728854	chr18	54910529	54911619	+	0	NA	Intergenic	Intergenic	139676	NR_045400	328957	Mm.402781	NR_045400		9330117O12Rik	9330117O12	RIKEN cDNA 9330117O12 gene	ncRNA
common_peak1-15507-9-9--0.132314688483142-1.03275496310833	chr4	116557651	116558150	+	0	NA	intron (NM_001029912, intron 1 of 13)	intron (NM_001029912, intron 1 of 13)	7893	NM_001029912	74464	Mm.218946	NM_001029912	ENSMUSG00000033948	Zswim5	4933426E21Rik|AI503093|mKIAA1511	zinc finger SWIM-type containing 5	protein-coding
common_peak2-31072-41-40-0.343596700230576-0.641883003087205	chr8	23038730	23039786	+	0	NA	Intergenic	Intergenic	3924	NM_139222	246082	Mm.390015	NM_139222	ENSMUSG00000048500	Defb15	BD-15	defensin beta 15	protein-coding
unique_peak2-38902-7-11--0.785871670422967-1.21681515183528	chr8	12671704	12672170	+	0	NA	intron (NM_198031, intron 1 of 21)	CpG	163	NM_198031	259279	Mm.246402	NM_198031	ENSMUSG00000000759	Tubgcp3	GCP3|Spc98p	tubulin, gamma complex associated protein 3	protein-coding
unique_peak2-37061-2-9--2.23938235115068-1.87199725847353	chr3	138771813	138772292	+	0	NA	Intergenic	Intergenic	-33887	NM_001040690	229877	Mm.28893	NM_145544	ENSMUSG00000028149	Rap1gds1	BC011279|GDS1	RAP1, GTP-GDP dissociation stimulator 1	protein-coding
common_peak2-25489-22-40--0.710267899530679-1.05951140195658	chr19	5050275	5051508	+	0	NA	promoter-TSS (NM_145495)	promoter-TSS (NM_145495)	83	NM_145495	225870	Mm.271922	NM_145495	ENSMUSG00000024883	Rin1	-	Ras and Rab interactor 1	protein-coding
common_peak2-32292-9-9--0.132314688483142-1.03275496310833	chrX	37084440	37085011	+	0	NA	Intergenic	Lx3C|LINE|L1	132056	NM_001191032	100504400	Mm.373409	NM_001191032	ENSMUSG00000095240	Cypt14	-	cysteine-rich perinuclear theca 14	protein-coding
unique_peak1-4653-36-4-3.15739299128039-9.0346949470042	chr3	89386463	89387722	+	0	NA	intron (NM_080466, intron 2 of 7)	intron (NM_080466, intron 2 of 7)	63006	NM_080466	140493	Mm.120250	NM_080466		Kcnn3	KCa2.3|SK3|SKCA3	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	protein-coding
common_peak1-13925-27-50--0.680879391076259-1.16605326768361	chr2	84714507	84715365	+	0	NA	intron (NM_199223, intron 2 of 2)	intron (NM_199223, intron 2 of 2)	11913	NM_199223	269295	Mm.86447	NM_199223	ENSMUSG00000050896	Rtn4rl2	Ngr2|Ngrh1|Ngrl3	reticulon 4 receptor-like 2	protein-coding
unique_peak1-4725-11-1-2.50869358425161-2.83420869758413	chr3	106487121	106487774	+	0	NA	promoter-TSS (NM_001039478)	promoter-TSS (NM_001039478)	-458	NM_001039478	321000	Mm.259638	NM_028081	ENSMUSG00000056260	Lrif1	2010012G17Rik|4933421E11Rik|AI450568	ligand dependent nuclear receptor interacting factor 1	protein-coding
common_peak2-22400-12-7-0.648775985087639-0.697979855752659	chr13	33051069	33051480	+	0	NA	Intergenic	(CAA)n|Simple_repeat|Simple_repeat	-6108	NM_011454	20708	Mm.36526	NM_011454	ENSMUSG00000042842	Serpinb6b	NK13|Spi12|ovalbumin	serine (or cysteine) peptidase inhibitor, clade B, member 6b	protein-coding
unique_peak2-39803-3-12--2.11442280810037-2.15846853396659	chrX	20848546	20849166	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-50065	NM_001252013	100503481	Mm.272069	NM_001252013		4930453H23Rik	-	RIKEN cDNA 4930453H23 gene	protein-coding
common_peak2-29808-24-14-0.886319307159198-1.33403699391683	chr6	91192107	91192900	+	0	NA	intron (NM_001081437, intron 2 of 16)	ORR1E|LTR|MaLR	29745	NM_007992	14115	Mm.249146	NM_007992	ENSMUSG00000064080	Fbln2	5730577E14Rik|FIBL-2	fibulin 2	protein-coding
common_peak2-25345-11-8-0.338768582809301-1.14218153353838	chr18	78115470	78115880	+	0	NA	intron (NM_013831, intron 12 of 14)	MER58B|DNA|MER1_type	-19531	NM_001195633	100502841	Mm.297782	NM_001195633	ENSMUSG00000039840	Epg5	4732475F16|5430411K18Rik|AI661957|AW456499|mKIAA1632	ectopic P-granules autophagy protein 5 homolog (C. elegans)	protein-coding
common_peak2-31372-34-46--0.172520324676372-0.340524918943711	chr8	85026733	85027695	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	-100729	NM_008357	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak2-23027-16-11-0.533301141546906-0.58239619684445	chr14	65358654	65359332	+	0	NA	intron (NM_001081177, intron 13 of 39)	intron (NM_001081177, intron 13 of 39)	87625	NM_001081177	16554	Mm.23611	NM_001081177	ENSMUSG00000060012	Kif13b	5330429L19Rik|6030414C01|AI429803|C130021D12Rik|GAKIN	kinesin family member 13B	protein-coding
common_peak2-30019-27-33--0.0959168903551033-0.304370854244436	chr6	125191838	125192742	+	0	NA	Intergenic	(CCAA)n|Simple_repeat|Simple_repeat	-5245	NM_001286753	21940	Mm.367714	NM_001033126	ENSMUSG00000030336	Cd27	S152|Tnfrsf7|Tp55	CD27 antigen	protein-coding
unique_peak1-6107-9-5-0.604650905683064-1.21398586181642	chr6	126033323	126033974	+	0	NA	Intergenic	B3|SINE|B2	81330	NM_001164035	18205	Mm.267570	NM_008742	ENSMUSG00000049107	Ntf3	AI316846|AI835689|Nt3|Ntf-3	neurotrophin 3	protein-coding
unique_peak2-35302-1-6--2.43441193227435-1.56314192529759	chr17	12741451	12741929	+	0	NA	Intergenic	L1MA8|LINE|L1	-35365	NM_013667	20518	Mm.17322	NM_013667	ENSMUSG00000040966	Slc22a2	Oct2|Orct2	solute carrier family 22 (organic cation transporter), member 2	protein-coding
common_peak2-24390-8-9--0.316705676939792-1.03275496310833	chr17	13492315	13492678	+	0	NA	Intergenic	Intergenic	-54942	NM_001167578	100041352	Mm.490251	NM_001167578	ENSMUSG00000052469	Tcp10c	D17Leh66C|D17Leh66ca|Gm9880|T66C-a|Tcp-10c	t-complex protein 10c	protein-coding
common_peak1-11845-41-11-2.1161862041275-6.59495851266917	chr16	90195825	90197490	+	0	NA	Intergenic	Intergenic	-24330	NM_011434	20655	Mm.276325	NM_011434	ENSMUSG00000022982	Sod1	B430204E11Rik|Cu/Zn-SOD|CuZnSOD|Ipo-1|Ipo1|SODC|Sod-1	superoxide dismutase 1, soluble	protein-coding
unique_peak1-5574-10-5-0.771452844287613-1.33892459842472	chr5	148695321	148695982	+	0	NA	intron (NM_027872, intron 4 of 5)	intron (NM_027872, intron 4 of 5)	10727	NM_027872	71706	Mm.153218	NM_027872	ENSMUSG00000029650	Slc46a3	1200006F02Rik	solute carrier family 46, member 3	protein-coding
common_peak2-20205-14-30--1.05498015002923-1.40782320807776	chr1	177795733	177796570	+	0	NA	Intergenic	B3|SINE|B2	-14758	NM_012012	26909	Mm.283046	NM_012012	ENSMUSG00000039748	Exo1	5730442G03Rik|Msa	exonuclease 1	protein-coding
common_peak2-20271-34-67--0.705394314249073-1.55729322517715	chr1	190928321	190929307	+	0	NA	Intergenic	Intergenic	-97095	NM_172650	226823	Mm.209880	NM_172650	ENSMUSG00000026608	Kctd3	4930438A20Rik|9330185B06|E330032J19Rik|NY-REN-45	potassium channel tetramerisation domain containing 3	protein-coding
unique_peak1-3648-23-3-2.72176750450908-4.84202874224997	chr19	38597699	38598572	+	0	NA	promoter-TSS (NM_019588)	promoter-TSS (NM_019588)	-552	NM_019588	74055	Mm.34031	NM_019588	ENSMUSG00000024998	Plce1	4933403A21Rik|PLCepsilon|Plce|mKIAA1516	phospholipase C, epsilon 1	protein-coding
common_peak2-20573-9-9--0.132314688483142-1.03275496310833	chr10	77150630	77151052	+	0	NA	intron (NM_001287074, intron 1 of 11)	intron (NM_001287074, intron 1 of 11)	1527	NM_001287074	252974	Mm.221237	NM_145855	ENSMUSG00000069581	Tspear	C330046G03Rik|ORF65|TSP-EAR|Tnep1	thrombospondin type laminin G domain and EAR repeats	protein-coding
unique_peak2-34506-2-6--1.72480917832092-1.26211192963361	chr14	48287449	48287844	+	0	NA	intron (NM_001293635, intron 3 of 40)	ID_B1|SINE|B4	4215	NM_008477	16709	Mm.3110	NM_008477	ENSMUSG00000021843	Ktn1	-	kinectin 1	protein-coding
common_peak1-16883-77-113--0.0483634346087438-0.309794050023144	chr6	71270830	71272769	+	0	NA	Intergenic	Intergenic	-1007	NM_009858	12526	Mm.333148	NM_009858	ENSMUSG00000053044	Cd8b1	Cd8b|Ly-3|Ly-C|Lyt-3	CD8 antigen, beta chain 1	protein-coding
common_peak2-22097-77-93-0.22993772787836-0.610533001990685	chr12	80114755	80116436	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-7331	NM_178745	268567	Mm.341747	NM_178745	ENSMUSG00000046157	Tmem229b	6330442E10Rik|9830138K24|AU019070	transmembrane protein 229B	protein-coding
common_peak1-12784-34-55--0.425286395056338-0.680499470139652	chr18	62548080	62548835	+	0	NA	intron (NM_008313, intron 2 of 6)	L1_Mus4|LINE|L1	64599	NM_008313	15562	Mm.20440	NM_008313	ENSMUSG00000026322	Htr4	5-HT-4|5-HT4|5-HT<4L>|5HTR4	5 hydroxytryptamine (serotonin) receptor 4	protein-coding
common_peak2-30382-8-9--0.316705676939792-1.03275496310833	chr7	29490020	29490408	+	0	NA	Intergenic	B3|SINE|B2	-11595	NM_015796	50760	Mm.358659	NM_015796	ENSMUSG00000030598	Fbxo17	Fbg4|Fbx17|Fbxo26	F-box protein 17	protein-coding
unique_peak2-38610-0-7--3.84013093047421-1.80617997398389	chr7	80155913	80156301	+	0	NA	Intergenic	L1Md_T|LINE|L1	90847	NR_046024	625243	Mm.261798	NR_046024		Gm6567	-	predicted gene 6567	ncRNA
unique_peak1-1801-11-5-0.923731083530457-1.477227296591	chr14	25371690	25372126	+	0	NA	Intergenic	URR1A|DNA|MER1_type	62005	NM_011297	20088	Mm.16775	NM_011297	ENSMUSG00000025290	Rps24	-	ribosomal protein S24	protein-coding
common_peak1-8785-52-32-1.06386587090725-3.3139873727868	chr11	11808791	11810429	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-11463	NM_001190448	13195	Mm.12906	NM_016672	ENSMUSG00000020182	Ddc	Aadc	dopa decarboxylase	protein-coding
common_peak1-12223-44-69--0.307390182376431-0.549574798715332	chr17	34942552	34944547	+	0	NA	Intergenic	MuRRS4-int|LTR|ERV1	-2178	NM_009995	13079	Mm.440407	NM_009995	ENSMUSG00000024365	Cyp21a1	21-OH|21OH|21OHA|21OHB|CYP21OH-A|Cyp21|Cyp21-ps1|Cyp21B|Cyp21a2-ps|Cyp21a2ps|Oh21-1|Oh21-2	cytochrome P450, family 21, subfamily a, polypeptide 1	protein-coding
common_peak1-11712-26-32--0.116495027199991-0.315041925765944	chr16	32332130	32332972	+	0	NA	intron (NM_177633, intron 1 of 10)	CpG	213	NM_177633	224111	Mm.31275	NM_177633	ENSMUSG00000053774	Ubxn7	A630090P18|AI196514|Ubxd7|mKIAA0794	UBX domain protein 7	protein-coding
common_peak2-28805-13-14--0.12841856497075-0.301029995663977	chr5	64810702	64811290	+	0	NA	Intergenic	MTD-int|LTR|MaLR	48185	NR_040681	69999	Mm.261413	NR_040681		1700027F09Rik	-	RIKEN cDNA 1700027F09 gene	ncRNA
unique_peak1-2109-24-7-1.79320990276772-3.23080944932562	chr15	40366785	40367798	+	0	NA	Intergenic	Intergenic	-8468	NR_046185	432945	Mm.321981	NR_046185	ENSMUSG00000056332	Gm16294	EG432945|OTTMUSG00000033304	predicted gene 16294	ncRNA
common_peak2-25974-12-4-1.32684789020028-2.04196296489515	chr19	53531370	53531784	+	0	NA	intron (NR_028427, intron 2 of 9)	RLTR14|LTR|ERV1	7709	NR_028427	381232	Mm.248624	NR_028427	ENSMUSG00000097636	5830416P10Rik	4833407H14Rik|5430437C04Rik|ENSMUSG00000074788|Gm10758	RIKEN cDNA 5830416P10 gene	ncRNA
common_peak2-30580-16-34--1.0110193746769-1.55539563639961	chr7	80323616	80324779	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-77243	NR_046024	625243	Mm.261798	NR_046024		Gm6567	-	predicted gene 6567	ncRNA
common_peak1-14874-115-153-0.212320419641495-0.71144194675462	chr3	95695182	95698101	+	0	NA	promoter-TSS (NM_153513)	promoter-TSS (NM_153513)	-788	NM_153513	229600	Mm.89556	NM_153513	ENSMUSG00000038543	BC028528	L259	cDNA sequence BC028528	protein-coding
common_peak1-13456-8-8--0.164702583494742-1.00793137938329	chr19	59075112	59075553	+	0	NA	intron (NM_175172, intron 13 of 14)	intron (NM_175172, intron 13 of 14)	57417	NM_178689	226265	Mm.103154	NM_178689	ENSMUSG00000048029	Eno4	6430537H07Rik	enolase 4	protein-coding
common_peak2-28387-4-5--0.608423014574403-0.909929411522249	chr4	139256075	139256465	+	0	NA	Intergenic	Intergenic	46817	NM_031873	83770	Mm.190612	NM_031873	ENSMUSG00000028738	Tas1r2	Gpr71|T1r2|TR2	taste receptor, type 1, member 2	protein-coding
unique_peak1-3942-9-3-1.18961340640422-1.57096726280955	chr2	29387143	29387654	+	0	NA	Intergenic	MTE-int|LTR|MaLR	-56584	NR_105753	102465170		NR_105753	miRBase:MI0021863	Mir133c	mmu-mir-133c	microRNA mir-133c	ncRNA
common_peak1-11735-9-10--0.269818212233077-1.05503135781948	chr16	33781621	33782083	+	0	NA	Intergenic	Intergenic	-12271	NM_010739	17063	Mm.3177	NM_010739	ENSMUSG00000022824	Muc13	114/A10|14/A10|AI159736|Lrrp|Ly64|NJ-1	mucin 13, epithelial transmembrane	protein-coding
common_peak2-30895-16-34--1.0110193746769-1.55539563639961	chr7	142386630	142387932	+	0	NA	intron (NR_046050, intron 1 of 3)	intron (NR_046050, intron 1 of 3)	404	NR_046050	74314	Mm.415339	NR_046050		1700120G07Rik	-	RIKEN cDNA 1700120G07 gene	ncRNA
common_peak2-32175-26-47--0.657063408562694-1.12279078807801	chr9	111271856	111272929	+	0	NA	intron (NM_001164659, intron 11 of 21)	intron (NM_001164659, intron 11 of 21)	58149	NM_001164659	320429	Mm.270754	NM_001164659	ENSMUSG00000062296	Trank1	A230061D21Rik|C030048J01Rik|Gm187|Lba1	tetratricopeptide repeat and ankyrin repeat containing 1	protein-coding
common_peak2-29147-15-9-0.690236655668294-0.732381977911291	chr5	127611301	127611925	+	0	NA	Intergenic	B3A|SINE|B2	-39322	NR_045371	75916	Mm.394659	NR_045371		4930572K03Rik	-	RIKEN cDNA 4930572K03 gene	ncRNA
unique_peak2-38553-10-6-0.549060422951165-1.21398586181642	chr7	62463942	62464298	+	0	NA	intron (NM_178705, intron 8 of 11)	intron (NM_178705, intron 8 of 11)	373505	NM_178705	233271	Mm.387344	NM_178705		Luzp2	9330154K17Rik|D130073E01	leucine zipper protein 2	protein-coding
common_peak2-28377-16-38--1.16713857659419-2.08714016986896	chr4	138216220	138217054	+	0	NA	Intergenic	GA-rich|Low_complexity|Low_complexity	-36730	NM_029401	75718	Mm.251530	NM_029401		Vwa5b1	4931403E03Rik	von Willebrand factor A domain containing 5B1	protein-coding
unique_peak2-34960-4-5--0.608423014574403-0.909929411522249	chr15	95886941	95887367	+	0	NA	Intergenic	L2a|LINE|L2	22829	NR_003627	402773	Mm.210567	NM_001033483		D030018L15Rik	-	nuclear receptor coactivator 2 pseudogene	pseudo
common_peak2-26506-9-7-0.18961340640422-1.05908390183068	chr2	85089273	85089665	+	0	NA	Intergenic	Intergenic	-52613	NM_001033346	241528	Mm.291095	NM_001033346	ENSMUSG00000075224	Lrrc55	A330097E02Rik|Gm351	leucine rich repeat containing 55	protein-coding
common_peak1-12259-55-126--0.784064815619463-3.27086594056921	chr17	36942380	36943745	+	0	NA	Intergenic	L1VL2|LINE|L1	-6058	NM_201611	399549	Mm.329034	NM_201611	ENSMUSG00000037130	H2-M10.6	-	histocompatibility 2, M region locus 10.6	protein-coding
common_peak2-21219-26-45--0.595662863898551-0.956885677565398	chr11	62280997	62282215	+	0	NA	intron (NM_001039536, intron 1 of 6)	B2_Mm2|SINE|B2	9644	NM_001039536	327942	Mm.390358	NM_199026		Pigl	Gm737	phosphatidylinositol glycan anchor biosynthesis, class L	protein-coding
unique_peak1-5162-9-0-3.18961340640422-3.01029995663981	chr5	25246609	25247112	+	0	NA	Intergenic	Intergenic	-18984	NM_001004365	242894	Mm.150319	NM_001004365	ENSMUSG00000056367	Actr3b	9630005C02|ARP11|AW047569|Arp3b|Arp3beta	ARP3 actin-related protein 3B	protein-coding
unique_peak1-2461-13-4-1.45654393575041-2.23384849113406	chr15	103478056	103478696	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-82864	NM_008134	14663	Mm.219621	NM_008134	ENSMUSG00000022491	Glycam1	MC26|Sgp50|glyCAM-1	glycosylation dependent cell adhesion molecule 1	protein-coding
common_peak2-29717-23-29--0.185123091099438-0.336580821310529	chr6	83794719	83795782	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	-13515	NM_146169	232164	Mm.404420	NM_146169	ENSMUSG00000045896	Paip2b	-	poly(A) binding protein interacting protein 2B	protein-coding
common_peak1-17154-22-6-1.8399291830298-3.01815507148775	chr6	118150492	118151321	+	0	NA	Intergenic	Intergenic	-3144	NM_001080780	19713	Mm.57199	NM_009050	ENSMUSG00000030110	Ret	PTC|RET51|RET9|c-Ret	ret proto-oncogene	protein-coding
common_peak2-20799-31-61--0.728957639573752-1.59039787900523	chr10	123075569	123076590	+	0	NA	intron (NR_045514, intron 2 of 5)	intron (NR_045514, intron 2 of 5)	374947	NM_001252387	268354	Mm.51939	NM_182807	ENSMUSG00000044071	Fam19a2	6330575M02|FAM19A2 TAFA-2|TAFA2|Tafa-2	family with sequence similarity 19, member A2	protein-coding
unique_peak1-6475-13-4-1.45654393575041-2.23384849113406	chr7	110914448	110915041	+	0	NA	Intergenic	RMER6C|LTR|ERVK	5364	NM_013621	18370	Mm.377110	NM_013621	ENSMUSG00000058662	Olfr69	3'[b]3|3'beta3|MOR22-2	olfactory receptor 69	protein-coding
common_peak2-27767-82-113-0.0603731301409933-0.334729014356514	chr3	130729841	130731096	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-82747	NM_010703	16842	Mm.255219	NM_010703	ENSMUSG00000027985	Lef1	3000002B05|AI451430|Lef-1	lymphoid enhancer binding factor 1	protein-coding
unique_peak1-5774-20-6-1.68071986253359-2.41165147706372	chr6	54096511	54097323	+	0	NA	intron (NM_001163640, intron 1 of 12)	B3|SINE|B2	106991	NM_001163640	69993	Mm.321147	NM_023543	ENSMUSG00000004633	Chn2	1700026N20Rik|4930557O16Rik|ARHGAP3|Bch	chimerin 2	protein-coding
common_peak2-31209-25-62--1.11543001815481-2.95981958782823	chr8	64849270	64850725	+	0	NA	Intergenic	ORR1A4|LTR|MaLR	-248007	NM_011922	26359	Mm.42179	NM_011922	ENSMUSG00000031635	Anxa10	-	annexin A10	protein-coding
unique_peak1-2918-8-6-0.197867495889966-1.03789460276074	chr17	47955385	47955854	+	0	NA	intron (NM_001276390, intron 3 of 3)	intron (NM_001276390, intron 3 of 3)	14621	NM_001276391	17240	Mm.329100	NM_010783	ENSMUSG00000032717	Mdfi	I-mf|I-mfa	MyoD family inhibitor	protein-coding
common_peak2-25678-17-28--0.639684656922534-0.677583764578261	chr19	11818316	11819062	+	0	NA	Intergenic	RMER1A|Other|Other	-3360	NM_008118	14603	Mm.456	NM_008118	ENSMUSG00000024682	Gif	AV073125	gastric intrinsic factor	protein-coding
common_peak1-11190-22-12-0.946844386946312-1.31435121412491	chr15	77273410	77274108	+	0	NA	intron (NM_001024848, intron 1 of 4)	RLTR19-int|LTR|ERVK	4131	NM_001024848	278679	Mm.440965	NM_001024848	ENSMUSG00000068252	Apol7b	-	apolipoprotein L 7b	protein-coding
common_peak2-26171-4-7--1.02346051385325-1.09384600808989	chr2	20526737	20527175	+	0	NA	intron (NM_001081006, intron 3 of 21)	IAPLTR2_Mm|LTR|ERVK	85816	NM_001177631	208618	Mm.237935	NM_029895	ENSMUSG00000036617	Etl4	6620402G01Rik|9430077C05Rik|BC026657|E330027G05Rik|Etl-4|Skt	enhancer trap locus 4	protein-coding
common_peak2-25529-28-16-0.965496278571123-1.60877160026697	chr19	5813815	5814484	+	0	NA	Intergenic	Intergenic	-11478	NR_002847	72289	Mm.298256	NR_002847	ENSMUSG00000092341	Malat1	2210401K01Rik|9430072K23Rik|AI647968|Neat2	metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)	ncRNA
unique_peak2-36364-4-13--1.83081543591085-2.04196296489515	chr2	104589457	104590112	+	0	NA	Intergenic	Intergenic	-6826	NM_144804	211896	Mm.288805	NM_144804	ENSMUSG00000027173	Depdc7	AV216087	DEP domain containing 7	protein-coding
common_peak1-16955-11-15--0.491306415748387-0.435191258261915	chr6	85069004	85069631	+	0	NA	intron (NM_001034902, intron 1 of 2)	intron (NM_001034902, intron 1 of 2)	6771	NM_001034902	545861	Mm.321419	NM_001034902	ENSMUSG00000072952	Gm5878	EG545861	predicted gene 5878	protein-coding
unique_peak2-34791-6-6--0.241956811677302-0.947717972411649	chr15	62569231	62569650	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-518434	NR_003523	67552	Mm.484027	NM_026230		H2afy3	4933432H23Rik	H2A histone family, member Y3	pseudo
common_peak2-24736-2-8--2.08737925770563-1.65811743852845	chr17	47688285	47688678	+	0	NA	intron (NM_001081635, intron 1 of 6)	intron (NM_001081635, intron 1 of 6)	-41935	NM_007632	12445	Mm.27291	NM_007632	ENSMUSG00000034165	Ccnd3	9230106B05Rik|AA682053|AL024085|AW146355|C78795	cyclin D3	protein-coding
unique_peak1-2844-10-2-1.77145284428761-2.09384600808989	chr17	29264276	29264782	+	0	NA	Intergenic	(GA)n|Simple_repeat|Simple_repeat	-7472	NM_001002786	442827	Mm.440341	NM_001002786	ENSMUSG00000064147	Rab44	9830134C10Rik	RAB44, member RAS oncogene family	protein-coding
unique_peak2-35112-3-5--0.998945590680433-0.96108193396963	chr16	24188155	24188508	+	0	NA	Intergenic	MTD|LTR|MaLR	-199633	NM_009744	12053	Mm.347398	NM_009744	ENSMUSG00000022508	Bcl6	Bcl5	B cell leukemia/lymphoma 6	protein-coding
common_peak1-10189-19-25--0.297752391479405-0.376654945067947	chr13	43364947	43365912	+	0	NA	intron (NM_001033399, intron 1 of 1)	MER21B|LTR|ERV1	34112	NM_001033399	328232	Mm.441399	NM_001033399	ENSMUSG00000051335	Gfod1	9630032O13|AI850995	glucose-fructose oxidoreductase domain containing 1	protein-coding
common_peak1-14552-12-24--0.995080204687086-1.0220094258199	chr3	34080859	34081468	+	0	NA	Intergenic	L1Md_T|LINE|L1	-100887	NM_026332	67713	Mm.274266	NM_026332	ENSMUSG00000027679	Dnajc19	1810055D05Rik|AA959924|Tim14	DnaJ (Hsp40) homolog, subfamily C, member 19	protein-coding
common_peak1-9634-38-57--0.286528335829042-0.468749305398727	chr12	40222141	40223409	+	0	NA	Intergenic	Intergenic	541188	NM_007487	11861	Mm.12723	NM_007487	ENSMUSG00000047446	Arl4a	AI467555|Arl4	ADP-ribosylation factor-like 4A	protein-coding
common_peak1-9993-13-18--0.469455482805817-0.409888142029227	chr13	54574855	54575535	+	0	NA	Intergenic	RLTR31_Mur|LTR|ERVK	-4994	NM_028597	73666	Mm.292487	NM_028597	ENSMUSG00000025872	Thoc3	2410044K02Rik|AL033344	THO complex 3	protein-coding
unique_peak2-34693-3-7--1.41398308995928-1.23214870625617	chr15	25638155	25638585	+	0	NA	intron (NM_019472, intron 3 of 40)	intron (NM_019472, intron 3 of 40)	86065	NM_019472	17909	Mm.60590	NM_019472	ENSMUSG00000022272	Myo10	AW048724|D15Ertd600e|mKIAA0799	myosin X	protein-coding
unique_peak1-4116-9-4-0.867685311516858-1.36011389749466	chr2	84528311	84528859	+	0	NA	TTS (NM_025885)	TTS (NM_025885)	-9600	NM_025868	66958	Mm.371621	NM_025868	ENSMUSG00000050043	Tmx2	2310042M24Rik|AA589631|Txndc14	thioredoxin-related transmembrane protein 2	protein-coding
unique_peak1-1494-8-1-2.00522241794757-2.05605744720049	chr13	51887765	51888237	+	0	NA	intron (NM_001281880, intron 1 of 16)	intron (NM_001281880, intron 1 of 16)	1115	NM_001281880	20354	Mm.33903	NM_013660	ENSMUSG00000021451	Sema4d	CD100|Semacl2|Semaj|Semcl2|coll-4	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D	protein-coding
common_peak1-13179-26-28-0.0699180970308904-0.316008636696532	chr19	16325155	16326132	+	0	NA	intron (NM_008139, intron 2 of 6)	intron (NM_008139, intron 2 of 6)	63851	NR_105832	102465218		NR_105832	miRBase:MI0021942	Mir496b	mmu-mir-496b	microRNA mir-496b	ncRNA
common_peak2-27876-38-41-0.17913523651977-0.420706537898431	chr4	32799855	32801033	+	0	NA	intron (NM_001081392, intron 39 of 101)	intron (NM_001081392, intron 39 of 101)	56350	NM_001081392	100019	Mm.24627	NM_133874	ENSMUSG00000058006	Mdn1	4833432B22Rik|A130070M06|AA958993|D4Abb1e|Gm135	midasin homolog (yeast)	protein-coding
common_peak2-22701-9-7-0.18961340640422-1.05908390183068	chr13	100532968	100533408	+	0	NA	Intergenic	MLT1E2|LTR|MaLR	137450	NM_013732	27220	Mm.75498	NM_013732	ENSMUSG00000021647	Cartpt	Cart	CART prepropeptide	protein-coding
unique_peak1-264-10-0-3.35641534500877-3.31132995230379	chr1	92774570	92774957	+	0	NA	Intergenic	Intergenic	-34215	NM_001243008	12835	Mm.7562	NM_009935	ENSMUSG00000048126	Col6a3	AI507288|Col6a-3	collagen, type VI, alpha 3	protein-coding
common_peak2-29992-44-41-0.429575411789775-0.87081905171081	chr6	122819616	122820578	+	0	NA	Intergenic	Intergenic	-4478	NM_026267	67602	Mm.288114	NM_026267	ENSMUSG00000030327	Necap1	1200016B17Rik|AI747569|mFLJ00061	NECAP endocytosis associated 1	protein-coding
common_peak2-24220-11-8-0.338768582809301-1.14218153353838	chr16	79879540	79879931	+	0	NA	Intergenic	Lx3_Mus|LINE|L1	-788393	NM_178855	19146	Mm.5184	NM_008941	ENSMUSG00000022857	Tmprss15	Entk|Prss7	transmembrane protease, serine 15	protein-coding
unique_peak2-36942-2-5--1.50241675698448-1.08602067057793	chr3	104361115	104361562	+	0	NA	Intergenic	Intergenic	-45559	NM_001025067	269473	Mm.34855	NM_001025067	ENSMUSG00000032913	Lrig2	4632419I10Rik|BB096938	leucine-rich repeats and immunoglobulin-like domains 2	protein-coding
common_peak2-23837-9-6-0.382258484346616-1.11707584880836	chr15	101929536	101929958	+	0	NA	Intergenic	Intergenic	-3672	NM_153533	209039	Mm.29389	NM_153533	ENSMUSG00000037003	Tenc1	C1-ten|nep|nph	tensin like C1 domain-containing phosphatase	protein-coding
unique_peak2-33856-7-11--0.785871670422967-1.21681515183528	chr12	17348429	17348912	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-6629	NM_001008421	217431	Mm.27536	NM_001008421	ENSMUSG00000061458	Nol10	Gm67	nucleolar protein 10	protein-coding
common_peak1-12309-19-34--0.72659569028328-0.974620203848502	chr17	47009760	47010678	+	0	NA	Intergenic	B3|SINE|B2	-17351	NM_178385	72726	Mm.33780	NM_178385	ENSMUSG00000036430	Tbcc	2810055C19Rik	tubulin-specific chaperone C	protein-coding
common_peak2-26497-29-53--0.642597421548357-1.10619710598095	chr2	84634345	84635791	+	0	NA	Intergenic	RMER17D2|LTR|ERVK	-3917	NM_019949	56791	Mm.38261	NM_019949	ENSMUSG00000027078	Ube2l6	2810489I21Rik|RIG-B|UBCH8|Ubce8|Ubcm8	ubiquitin-conjugating enzyme E2L 6	protein-coding
common_peak2-31155-10-7-0.356415345008769-1.12966497611638	chr8	44454978	44455383	+	0	NA	Intergenic	URR1A|DNA|MER1_type	-62817	NM_009556	22702	Mm.285848	NM_009556	ENSMUSG00000051176	Zfp42	Rex-1|Rex1|Zfp-42	zinc finger protein 42	protein-coding
unique_peak2-39072-6-6--0.241956811677302-0.947717972411649	chr8	72493105	72493486	+	0	NA	intron (NM_145596, intron 1 of 12)	intron (NM_145596, intron 1 of 12)	4987	NM_001113346	234366	Mm.270044	NM_145596	ENSMUSG00000036180	Gatad2a	1110066C11Rik|BC031407|C80248	GATA zinc finger domain containing 2A	protein-coding
common_peak1-10928-22-28--0.210696890040167-0.337923771396236	chr15	9071414	9072198	+	0	NA	intron (NM_177178, intron 1 of 17)	intron (NM_177178, intron 1 of 17)	1480	NM_177178	320506	Mm.259886	NM_177178	ENSMUSG00000039704	Lmbrd2	9930036E21Rik	LMBR1 domain containing 2	protein-coding
common_peak2-26369-30-36--0.039777956137077-0.301029995663973	chr2	39004262	39005305	+	0	NA	intron (NM_178778, intron 2 of 17)	intron (NM_178778, intron 2 of 17)	12972	NR_033526	100042584	Mm.451696	NR_033526		Gm16523	A130054J05Rik	mitochondrial ribosomal protein L40 pseudogene	pseudo
unique_peak1-5328-14-3-1.89921616035764-2.80787975886178	chr5	81358066	81358726	+	0	NA	Intergenic	Intergenic	-92222	NM_198702	319387	Mm.273631	NM_198702	ENSMUSG00000037605	Lphn3	5430402I23Rik|CIRL-3|D130075K09Rik|Gm1379|LEC3|mKIAA0768	latrophilin 3	protein-coding
unique_peak2-34866-10-7-0.356415345008769-1.12966497611638	chr15	77815885	77816316	+	0	NA	Intergenic	Intergenic	-14846	NM_018749	55944	Mm.3955	NM_018749	ENSMUSG00000016554	Eif3d	66/67kDa|AA407891|Eif3s7|eIF3p66	eukaryotic translation initiation factor 3, subunit D	protein-coding
common_peak1-18109-68-43-1.110529160661-4.6627415662855	chr8	3416683	3418589	+	0	NA	intron (NM_133962, intron 1 of 19)	intron (NM_133962, intron 1 of 19)	24628	NM_133962	102098	Mm.170461	NM_133962	ENSMUSG00000004568	Arhgef18	AI467246|D030053O22Rik	rho/rac guanine nucleotide exchange factor (GEF) 18	protein-coding
common_peak2-31021-26-30--0.0262972182284127-0.301029995663988	chr8	11497082	11498151	+	0	NA	promoter-TSS (NM_026995)	promoter-TSS (NM_026995)	48	NM_026995	69225	Mm.64911	NM_026995	ENSMUSG00000031505	Carkd	0710008K08Rik|2810407E01Rik	carbohydrate kinase domain containing	protein-coding
unique_peak1-1820-7-2-1.21412832957703-1.45399745587252	chr14	32042114	32042550	+	0	NA	3' UTR (NM_001025379, exon 16 of 16)	3' UTR (NM_001025379, exon 16 of 16)	11273	NM_001025379	218877	Mm.27812	NM_001025379	ENSMUSG00000021904	Sema3g	AK129018	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3G	protein-coding
common_peak1-11660-8-8--0.164702583494742-1.00793137938329	chr16	24494784	24495296	+	0	NA	intron (NM_001145952, intron 2 of 11)	intron (NM_001145952, intron 2 of 11)	-34360	NR_038091	624582	Mm.439775	NR_038091		A730098P11Rik	-	mortality factor 4 like 1 pseudogene	pseudo
common_peak2-21581-14-9-0.577288065470282-0.630231561310125	chr11	97807616	97808165	+	0	NA	intron (NM_028199, intron 7 of 13)	(CA)n|Simple_repeat|Simple_repeat	39870	NM_028199	72324	Mm.39617	NM_028199	ENSMUSG00000017417	Plxdc1	2410003I07Rik|AI848450|Tem7	plexin domain containing 1	protein-coding
unique_peak2-32837-1-9--2.94898510510411-2.31132995230379	chr1	191937461	191937770	+	0	NA	Intergenic	RSINE1|SINE|B4	56944	NM_008937	19130	Mm.132579	NM_008937	ENSMUSG00000010175	Prox1	A230003G05Rik	prospero homeobox 1	protein-coding
unique_peak2-38018-6-17--1.60452689106201-1.49151883326343	chr6	33248938	33249737	+	0	NA	intron (NM_009148, intron 4 of 17)	intron (NM_009148, intron 4 of 17)	50187	NM_009148	20336	Mm.265512	NM_009148		Exoc4	C78892|Sec8|Sec8l1	exocyst complex component 4	protein-coding
unique_peak2-34114-3-11--1.99894559068043-1.95434855131066	chr13	21734285	21734873	+	0	NA	Intergenic	Intergenic	-3189	NM_146542	218066	Mm.484775	NM_146542	ENSMUSG00000036658	Olfr11	M49|MOR256-11|ORL121	olfactory receptor 11	protein-coding
common_peak2-26148-37-88--0.949740359480579-3.20834184032052	chr2	14054789	14056372	+	0	NA	intron (NM_011484, intron 8 of 13)	intron (NM_011484, intron 8 of 13)	-40571	NM_001081310	625286	Mm.158781	NM_001081310	ENSMUSG00000061531	Tmem236	2010003H20Rik|Fam23a|Gm613	transmembrane protein 236	protein-coding
common_peak1-13561-64-50-0.793021059737108-2.60283083993854	chr2	6212060	6213712	+	0	NA	intron (NR_040333, intron 4 of 6)	B3A|SINE|B2	-30917	NM_001080548	98910	Mm.40673	NM_181399	ENSMUSG00000039046	Usp6nl	AI316785|RNTRE|TRE2NL|mKIAA0019	USP6 N-terminal like	protein-coding
common_peak2-20213-21-22-0.0459273092092225-0.319918318021793	chr1	179047874	179048804	+	0	NA	intron (NM_011785, intron 2 of 12)	intron (NM_011785, intron 2 of 12)	130559	NM_011785	23797	Mm.235194	NM_011785	ENSMUSG00000019699	Akt3	AI851531|D930002M15Rik|Nmf350	thymoma viral proto-oncogene 3	protein-coding
common_peak1-12452-34-39-0.0601404321139034-0.325162986021101	chr17	83350135	83351692	+	0	NA	Intergenic	Intergenic	126652	NR_045094	100503434	Mm.187281	NR_045094		Gm19689	-	predicted gene, 19689	ncRNA
common_peak1-7450-29-30-0.158093770228236-0.384630725886669	chr1	72464886	72466691	+	0	NA	Intergenic	Intergenic	111793	NM_009533	22596	Mm.246952	NM_009533	ENSMUSG00000026187	Xrcc5	AI314015|Ku80|Ku86	X-ray repair complementing defective repair in Chinese hamster cells 5	protein-coding
unique_peak1-4402-10-1-2.35641534500877-2.57096726280955	chr2	165951500	165952059	+	0	NA	intron (NM_028072, intron 2 of 20)	intron (NM_028072, intron 2 of 20)	29006	NM_001252578	72043	Mm.1011	NM_028072	ENSMUSG00000006800	Sulf2	2010004N24Rik|AU020235|MSulf-2|mKIAA1247	sulfatase 2	protein-coding
unique_peak1-3328-9-0-3.18961340640422-3.01029995663981	chr18	84658869	84659380	+	0	NA	intron (NM_001033341, intron 3 of 8)	intron (NM_001033341, intron 3 of 8)	99772	NM_001033341	240476	Mm.329575	NM_001033341	ENSMUSG00000048410	Zfp407	6430585N13Rik|Gm333|Gm334|Gm948|ZNF407	zinc finger protein 407	protein-coding
unique_peak2-36562-3-7--1.41398308995928-1.23214870625617	chr2	169586919	169587297	+	0	NA	intron (NM_080455, intron 1 of 1)	intron (NM_080455, intron 1 of 1)	127962	NM_080455	228911	Mm.315789	NM_080455	ENSMUSG00000047907	Tshz2	2900073F20Rik|B830045G17|Mtsh2|Sdccag33l|Tsh2|Zfp218|mKIAA4248|teashirt2	teashirt zinc finger family member 2	protein-coding
unique_peak2-35439-3-6--1.22133801201688-1.08602067057793	chr17	35046072	35046432	+	0	NA	intron (NM_147151, intron 20 of 26)	B1_Mus1|SINE|Alu	-5159	NM_023557	70129	Mm.183126	NM_023557	ENSMUSG00000007034	Slc44a4	2210409B01Rik|NG22	solute carrier family 44, member 4	protein-coding
common_peak2-29122-11-11--0.0762689164695427-0.301029995663976	chr5	124007200	124007725	+	0	NA	intron (NM_029929, intron 7 of 12)	B4|SINE|B4	15562	NM_029929	77573	Mm.41372	NM_029929	ENSMUSG00000029434	Vps33a	3830421M04Rik|AI503300|AW048546|AW554476|bf	vacuolar protein sorting 33A (yeast)	protein-coding
unique_peak1-6846-14-8-0.729291158915332-0.771068449301682	chr8	84501130	84501892	+	0	NA	intron (NM_001297596, intron 14 of 24)	intron (NM_001297596, intron 14 of 24)	424974	NM_001254747	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak1-14284-179-222-0.447140775163165-3.08823603515425	chr2	157422144	157425236	+	0	NA	Intergenic	Intergenic	-31593	NM_016916	53619	Mm.480461	NM_016916	ENSMUSG00000067787	Blcap	AI462828|Bc10	bladder cancer associated protein homolog (human)	protein-coding
common_peak1-18106-44-32-0.777498715210082-1.84665509793009	chr8	3411105	3412997	+	0	NA	intron (NM_133962, intron 1 of 19)	intron (NM_133962, intron 1 of 19)	19043	NM_133962	102098	Mm.170461	NM_133962	ENSMUSG00000004568	Arhgef18	AI467246|D030053O22Rik	rho/rac guanine nucleotide exchange factor (GEF) 18	protein-coding
common_peak2-29756-27-32--0.0528481684632176-0.301029995663997	chr6	86683747	86684967	+	0	NA	promoter-TSS (NM_011818)	promoter-TSS (NM_011818)	-985	NM_011818	23885	Mm.321452	NM_011818	ENSMUSG00000001157	Gmcl1	2810049L19Rik|Gcl|mglc-1	germ cell-less homolog 1 (Drosophila)	protein-coding
common_peak1-17260-61-74-0.15393063925346-0.413122813965767	chr6	134670075	134672262	+	0	NA	intron (NM_001048054, intron 5 of 6)	B4|SINE|B4	71478	NM_130447	70686	Mm.491182	NM_130447	ENSMUSG00000030203	Dusp16	3830417M17Rik|AW558566|D6Ertd213e|MKP-7|MKP7|Mkpm	dual specificity phosphatase 16	protein-coding
common_peak1-10564-23-49--0.922088685265644-1.85759988472352	chr14	20929363	20930180	+	0	NA	Intergenic	ORR1A2|LTR|MaLR	-27377	NM_026209	67509	Mm.292423	NM_026209	ENSMUSG00000045107	Saysd1	1810063B07Rik|4930488P03Rik	SAYSVFN motif domain containing 1	protein-coding
common_peak1-14162-16-11-0.533301141546906-0.58239619684445	chr2	137115921	137116605	+	0	NA	Intergenic	RLTR15|LTR|ERVK	-174007	NM_013822	16449	Mm.22398	NM_013822	ENSMUSG00000027276	Jag1	ABE2|Gsfabe2|Htu|Ozz|Ser-1	jagged 1	protein-coding
unique_peak2-38288-9-18--1.05831410703937-0.965105923112245	chr6	134829446	134829933	+	0	NA	intron (NR_072990, intron 3 of 4)	L1M2|LINE|L1	8114	NR_074084	14760	Mm.4787	NM_008157	ENSMUSG00000032641	Gpr19	-	G protein-coupled receptor 19	protein-coding
common_peak2-30100-19-19-0.0807592317743238-0.322753776620787	chr6	135064956	135065580	+	0	NA	intron (NM_001205396, intron 2 of 3)	intron (NM_001205396, intron 2 of 3)	3033	NM_053118	93746	Mm.49902	NM_053118	ENSMUSG00000030205	Gprc5d	-	G protein-coupled receptor, family C, group 5, member D	protein-coding
common_peak1-16513-92-86-0.649408587854037-2.76748705032247	chr5	140418142	140420010	+	0	NA	intron (NM_175522, intron 1 of 1)	intron (NM_175522, intron 1 of 1)	35179	NM_175522	243312	Mm.237102	NM_175522	ENSMUSG00000048988	Elfn1	A930017N06Rik|AI197272|Ppp1r28	leucine rich repeat and fibronectin type III, extracellular 1	protein-coding
common_peak1-8283-37-55--0.281361850571785-0.475408985215012	chr10	26077740	26079050	+	0	NA	intron (NM_172787, intron 1 of 21)	Tigger12c|DNA|MER2_type	16596	NM_172787	237339	Mm.338439	NM_172787	ENSMUSG00000039089	L3mbtl3	AI481284|MBT-1	l(3)mbt-like 3 (Drosophila)	protein-coding
unique_peak2-37224-6-12--1.13504160776079-1.45089835786865	chr4	88776223	88776781	+	0	NA	Intergenic	Intergenic	-6772	NM_024433	66902	Mm.28500	NM_024433	ENSMUSG00000062937	Mtap	1300019I21Rik|MSAP	methylthioadenosine phosphorylase	protein-coding
common_peak1-9552-9-9--0.132314688483142-1.03275496310833	chr11	117199566	117200094	+	0	NA	intron (NM_001113488, intron 1 of 9)	intron (NM_001113488, intron 1 of 9)	6203	NM_001113488	53860	Mm.38450	NM_017380	ENSMUSG00000059248	Sept9	MSF1|Msf|PNUTL4|Sint1	septin 9	protein-coding
unique_peak1-3273-10-0-3.35641534500877-3.31132995230379	chr18	70647160	70647638	+	0	NA	intron (NM_001289649, intron 6 of 8)	L1_Mm|LINE|L1	15079	NM_001289650	170461	Mm.83623	NM_029019	ENSMUSG00000079608	Stard6	1700011K09Rik|4833424I06Rik|4933429L05Rik|AI644424	StAR-related lipid transfer (START) domain containing 6	protein-coding
common_peak1-7680-18-12-0.612479433087259-0.739965416525508	chr1	78644428	78645295	+	0	NA	Intergenic	Intergenic	-9539	NM_001033606	74205	Mm.276016	NM_028817	ENSMUSG00000032883	Acsl3	2610510B12Rik|Acs3|C85929|Facl3|Pro2194	acyl-CoA synthetase long-chain family member 3	protein-coding
unique_peak2-37571-4-7--1.02346051385325-1.09384600808989	chr5	34536210	34536698	+	0	NA	Intergenic	B1_Mur3|SINE|Alu	-6095	NM_010753	17122	Mm.259260	NM_010753	ENSMUSG00000037235	Mxd4	2810410A03Rik|Mad4|bHLHc12	Max dimerization protein 4	protein-coding
unique_peak2-38711-11-13--0.298661337805991-0.337263207250336	chr7	110649223	110649913	+	0	NA	Intergenic	Intergenic	5890	NM_147081	259085	Mm.377830	NM_147081	ENSMUSG00000045584	Olfr610	MOR9-2	olfactory receptor 610	protein-coding
common_peak2-20927-105-176--0.146271639559831-0.466538096012336	chr11	6474563	6476647	+	0	NA	intron (NM_146014, intron 2 of 9)	B1_Mur4|SINE|Alu	15419	NM_001190344	216527	Mm.221271	NM_146014	ENSMUSG00000000378	Ccm2	BC029157	cerebral cavernous malformation 2	protein-coding
common_peak1-10157-58-64-0.273582121862042-0.643324565023122	chr13	37440228	37441962	+	0	NA	intron (NM_010745, intron 1 of 4)	intron (NM_010745, intron 1 of 4)	3881	NM_010745	17084	Mm.2639	NM_010745	ENSMUSG00000021423	Ly86	MD-1|MD1	lymphocyte antigen 86	protein-coding
unique_peak2-38600-4-4--0.345388608740609-0.864171920961574	chr7	79274370	79274707	+	0	NA	intron (NM_001024703, intron 17 of 22)	intron (NM_001024703, intron 17 of 22)	176943	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding
common_peak2-32154-19-39--0.919240768225676-1.49187957593	chr9	108490590	108491325	+	0	NA	intron (NM_028944, intron 2 of 8)	intron (NM_028944, intron 2 of 8)	8974	NM_028944	74443	Mm.226534	NM_028944	ENSMUSG00000006675	P4htm	4933406E20Rik|AI853847|BB128974|Ph-4	prolyl 4-hydroxylase, transmembrane (endoplasmic reticulum)	protein-coding
common_peak1-9043-7-10--0.660340788339108-1.12966497611638	chr11	63566111	63566579	+	0	NA	Intergenic	Intergenic	169441	NM_018805	54710	Mm.274426	NM_018805	ENSMUSG00000070407	Hs3st3b1	3-OST-3B|3OST3B1|3Ost3b|AU041882|AW536289|Hs3st3b|m3-OST-3B	heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1	protein-coding
common_peak1-9691-11-19--0.813234510635749-0.769930178837768	chr12	17303203	17303726	+	0	NA	intron (NM_133699, intron 6 of 13)	intron (NM_133699, intron 6 of 13)	28072	NM_133699	68775	Mm.178798	NM_133699	ENSMUSG00000020566	Atp6v1c2	1110038G14Rik	ATPase, H+ transporting, lysosomal V1 subunit C2	protein-coding
common_peak1-10868-29-34--0.0169929363298555-0.304177167304369	chr15	10714408	10715508	+	0	NA	intron (NR_045063, intron 5 of 6)	L1Md_T|LINE|L1	-43848	NR_040357	100502601	Mm.399434	NR_040357		Gm19276	-	predicted gene, 19276	ncRNA
common_peak2-32278-12-13--0.158578936969966-0.301029995663979	chrX	16618106	16618559	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-129442	NM_010883	17986	Mm.5014	NM_010883	ENSMUSG00000040138	Ndp	ND|Ndph	Norrie disease (pseudoglioma) (human)	protein-coding
unique_peak1-5462-11-1-2.50869358425161-2.83420869758413	chr5	123318307	123318936	+	0	NA	3' UTR (NM_030564, exon 6 of 6)	3' UTR (NM_030564, exon 6 of 6)	18424	NM_030564	80751	Mm.388529	NM_030564	ENSMUSG00000029474	Rnf34	AW061037|AW536122|BC004042|C88279|RIFF	ring finger protein 34	protein-coding
common_peak2-29014-29-34--0.0169929363298555-0.304177167304369	chr5	110879476	110880370	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-2401	NM_001142642	381668	Mm.348782	NM_028596	ENSMUSG00000043323	Fbrsl1	2410025L10Rik|AI467568|Gm1049|mKIAA1545	fibrosin-like 1	protein-coding
unique_peak2-34583-4-10--1.48289213249054-1.5150158574804	chr14	69284302	69284981	+	0	NA	Intergenic	(TA)n|Simple_repeat|Simple_repeat	-10742	NM_183366	13522	Mm.117450	NM_010082	ENSMUSG00000014725	Adam28	C130072N01Rik|D430033C21Rik|Dtgn1|MDC-L|MDC-Lm|MDC-Ls|MDCL|TECADAM|eMDCII	a disintegrin and metallopeptidase domain 28	protein-coding
unique_peak2-39403-1-5--2.2120195109379-1.32905871926422	chr9	32635762	32636183	+	0	NA	Intergenic	Intergenic	132345	NM_001038642	23871	Mm.292415	NM_011808	ENSMUSG00000032035	Ets1	AI196000|AI448617|D230050P06|Ets-1|Tpl1	E26 avian leukemia oncogene 1, 5' domain	protein-coding
common_peak2-25860-11-7-0.508693584251613-1.21681515183528	chr19	42717432	42717928	+	0	NA	Intergenic	Lx|LINE|L1	-30384	NM_053083	67573	Mm.178767	NM_053083	ENSMUSG00000025185	Loxl4	4833426I20Rik|Loxc	lysyl oxidase-like 4	protein-coding
unique_peak1-705-8-3-1.00522241794757-1.39487600375387	chr10	84056654	84057172	+	0	NA	intron (NM_146008, intron 5 of 9)	intron (NM_146008, intron 5 of 9)	17221	NM_146008	216198	Mm.296142	NM_146008	ENSMUSG00000020034	Tcp11l2	E430026E19Rik	t-complex 11 (mouse) like 2	protein-coding
unique_peak2-33598-0-16--4.92759377172455-4.18809100057339	chr11	88895689	88896161	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	26137	NM_019505	56077	Mm.153695	NM_019505	ENSMUSG00000000276	Dgke	C87606|DAGK6|DGK	diacylglycerol kinase, epsilon	protein-coding
common_peak2-29478-13-13--0.0288828914198356-0.309074325783021	chr6	31075198	31075879	+	0	NA	intron (NR_110471, intron 3 of 3)	intron (NR_110471, intron 3 of 3)	-62445	NR_029532	387223		NR_029532	miRBase:MI0000143	Mir29b-1	Mirn29b|Mirn29b-1	microRNA 29b-1	ncRNA
unique_peak2-36866-3-18--2.66191060340286-2.88232357121378	chr3	92211900	92212484	+	0	NA	intron (NM_011475, intron 1 of 1)	intron (NM_011475, intron 1 of 1)	279	NM_011475	20763	Mm.196439	NM_011475	ENSMUSG00000042157	Sprr2i	-	small proline-rich protein 2I	protein-coding
unique_peak1-7290-11-7-0.508693584251613-1.21681515183528	chr9	107975476	107976128	+	0	NA	intron (NM_032543, intron 3 of 38)	intron (NM_032543, intron 3 of 38)	5904	NM_032543	84585	Mm.379272	NM_032543	ENSMUSG00000041528	Rnf123	BC003945|Kpc1	ring finger protein 123	protein-coding
common_peak1-15349-39-65--0.4286328724393-0.790272552182767	chr4	55532630	55533642	+	0	NA	Intergenic	Intergenic	12211	NM_010637	16600	Mm.4325	NM_010637	ENSMUSG00000003032	Klf4	EZF|Gklf|Zie	Kruppel-like factor 4 (gut)	protein-coding
common_peak1-14324-13-10-0.319040412000471-0.446472590016315	chr2	163583797	163584492	+	0	NA	Intergenic	Intergenic	-8169	NM_001272052	11486	Mm.388	NM_007398	ENSMUSG00000017697	Ada	-	adenosine deaminase	protein-coding
common_peak2-24626-23-19-0.399839409621718-0.538442145997695	chr17	34627524	34628294	+	0	NA	intron (NR_004051, intron 6 of 8)	intron (NR_004051, intron 6 of 8)	6465	NR_004051	81497	Mm.484231	NR_004051		Btnl5-ps	Btnl5|ENSMUSG00000073420|Gm15330|NG12|OTTMUSG00000020237	butyrophilin-like 5, pseudogene	pseudo
common_peak1-11139-57-45-0.742471084021916-2.14513908252199	chr15	73089980	73091525	+	0	NA	intron (NM_007982, intron 20 of 31)	MER82|DNA|MER2_type	-75375	NM_153178	239528	Mm.23095	NM_153178		Ago2	1110029L17Rik|2310051F07Rik|AI225898|AL022874|AW546247|ENSMUSG00000072493|Eif2c2|Gerp95|Gm10365|mKIAA4215	argonaute RISC catalytic subunit 2	protein-coding
unique_peak1-6870-28-5-2.46799661910031-5.31420319710686	chr8	88294077	88295086	+	0	NA	intron (NM_028007, intron 8 of 17)	intron (NM_028007, intron 8 of 17)	69777	NR_106189	102465898		NR_106189	miRBase:MI0026041	Mir8109	mmu-mir-8109	microRNA mir-8109	ncRNA
unique_peak1-1862-13-2-2.19350952991661-3.03832868024006	chr14	54409865	54410578	+	0	NA	Intergenic	Intergenic	124606	NM_001205242	100568452	Mm.213248	NM_001205242		A430107P09Rik	Va10	RIKEN cDNA A430107P09 gene	protein-coding
common_peak2-32230-18-11-0.727956650507195-0.876666802405043	chr9	123215474	123216063	+	0	NA	Intergenic	Intergenic	-45861	NM_001002267	72309	Mm.8569	NM_001002267	ENSMUSG00000054871	Tmem158	2310037P21Rik|Ris1	transmembrane protein 158	protein-coding
unique_peak1-6732-17-2-2.63333383748388-3.75443312462699	chr8	45357989	45358849	+	0	NA	Intergenic	Intergenic	-573574	NM_001079931	384814	Mm.491652	NM_001079931		Gm5347	EG384814	predicted gene 5347	protein-coding
common_peak1-11860-16-13-0.310908720210457-0.417187467413082	chr16	92233704	92234518	+	0	NA	Intergenic	Intergenic	-58523	NM_134110	246133	Mm.156736	NM_134110	ENSMUSG00000039672	Kcne2	2200002I16Rik|AW048273|MiRP1	potassium voltage-gated channel, Isk-related subfamily, gene 2	protein-coding
common_peak2-29935-53-84--0.268417923721773-0.53806889543825	chr6	115675307	115676574	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	9029	NM_001168259	94346	Mm.29739	NM_144805	ENSMUSG00000059900	Tmem40	9030407H20Rik|AV091463|W64236	transmembrane protein 40	protein-coding
common_peak2-20780-47-71--0.235083576675764-0.465693198848464	chr10	119238951	119240072	+	0	NA	intron (NM_133442, intron 1 of 21)	intron (NM_133442, intron 1 of 21)	-16934	NM_001277294	74053	Mm.196692	NM_028736	ENSMUSG00000034813	Grip1	4931400F03Rik|GRIP|eb	glutamate receptor interacting protein 1	protein-coding
common_peak1-11582-12-11-0.0638134843664826-0.337263207250336	chr16	15185991	15186557	+	0	NA	Intergenic	RMER17B|LTR|ERVK	279535	NM_025769	66793	Mm.100270	NM_025769		Efcab1	4930449A16Rik|5430404L10Rik	EF hand calcium binding domain 1	protein-coding
common_peak1-16420-58-52-0.568029480327298-1.51813377769486	chr5	129786240	129787947	+	0	NA	Intergenic	Intergenic	184468	NM_001081342	243277	Mm.440501	NM_177734	ENSMUSG00000044017	Gpr133	E230012M21Rik	G protein-coupled receptor 133	protein-coding
common_peak2-30336-9-11--0.395349094316936-0.344532117358383	chr7	25297595	25298039	+	0	NA	intron (NR_110958, intron 2 of 2)	L2b|LINE|L2	5711	NR_110958	232969	Mm.181332	NM_146183	ENSMUSG00000064264	Zfp428	2410005H09Rik|AV271806|AW047854|Znf428	zinc finger protein 428	protein-coding
unique_peak1-3599-14-6-1.09186123830004-1.16633110333236	chr19	32188595	32189408	+	0	NA	Intergenic	MTC|LTR|MaLR	-11371	NM_018830	54447	Mm.491229	NM_018830	ENSMUSG00000024887	Asah2	AI585898	N-acylsphingosine amidohydrolase 2	protein-coding
unique_peak1-3421-7-2-1.21412832957703-1.45399745587252	chr19	6106933	6107431	+	0	NA	intron (NM_001009546, intron 4 of 17)	B1_Mus1|SINE|Alu	1384	NM_001009546	381204	Mm.359041	NM_001009546	ENSMUSG00000054999	Naaladl1	Gm964|Naaladasel	N-acetylated alpha-linked acidic dipeptidase-like 1	protein-coding
common_peak2-24702-6-10--0.894033508256995-1.21398586181642	chr17	45736386	45736987	+	0	NA	promoter-TSS (NM_001199115)	promoter-TSS (NM_001199115)	-134	NM_001199115	63959	Mm.29744	NM_022880	ENSMUSG00000023942	Slc29a1	1200014D21Rik|AA407560|ENT1	solute carrier family 29 (nucleoside transporters), member 1	protein-coding
unique_peak2-36978-7-5-0.214128329577033-1.01466476204226	chr3	116513210	116513586	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-2314	NM_001081326	77559	Mm.237099	NM_001081326	ENSMUSG00000033400	Agl	1110061O17Rik|9430004C13Rik|9630046L06Rik|AI850929|C77197	amylo-1,6-glucosidase, 4-alpha-glucanotransferase	protein-coding
common_peak2-24522-13-17--0.391452970804544-0.364171515310935	chr17	26620935	26621670	+	0	NA	Intergenic	Intergenic	24115	NM_013642	19252	Mm.239041	NM_013642	ENSMUSG00000024190	Dusp1	3CH134|MKP1|Ptpn16|U19515|erp|mkp-1	dual specificity phosphatase 1	protein-coding
common_peak2-22638-18-30--0.641277159158523-0.738267116931589	chr13	91461200	91462392	+	0	NA	Intergenic	Intergenic	65894	NR_045161	320297	Mm.375866	NR_045161	ENSMUSG00000097182	A830009L08Rik	-	RIKEN cDNA A830009L08 gene	ncRNA
common_peak2-30871-8-25--1.69521730019352-2.29727994934156	chr7	140036352	140036760	+	0	NA	intron (NM_028095, intron 3 of 5)	intron (NM_028095, intron 3 of 5)	7774	NM_028095	72096	Mm.28631	NM_028095	ENSMUSG00000030960	Mettl10	2010208K18Rik	methyltransferase like 10	protein-coding
unique_peak1-4819-14-3-1.89921616035764-2.80787975886178	chr3	144664319	144664989	+	0	NA	Intergenic	Intergenic	-26645	NM_207208	99663	Mm.442050	NM_207208	ENSMUSG00000068547	Clca6	9130020L07Rik|AI504701|Clca4	chloride channel calcium activated 6	protein-coding
unique_peak1-6109-23-10-1.26233588587178-1.90052685918624	chr6	126939328	126940210	+	0	NA	Intergenic	Intergenic	-25791	NM_010204	14177	Mm.3403	NM_010204	ENSMUSG00000000183	Fgf6	Fgf-6|HSTF-2	fibroblast growth factor 6	protein-coding
unique_peak1-1213-13-4-1.45654393575041-2.23384849113406	chr11	106659098	106659691	+	0	NA	intron (NM_177088, intron 4 of 19)	intron (NM_177088, intron 4 of 19)	8828	NM_001166685	320162	Mm.30524	NM_177088	ENSMUSG00000018372	Cep95	4732496G21Rik|AI118346|AI448335|Ccdc45|D330027A14Rik|F630025I20Rik	centrosomal protein 95	protein-coding
common_peak1-14053-20-18-0.240147271147608-0.388034239052786	chr2	119337412	119338114	+	0	NA	Intergenic	Intergenic	-34398	NM_026574	68142	Mm.330496	NM_026574	ENSMUSG00000034154	Ino80	2310079N15Rik|4632409L19Rik|Inoc1	INO80 homolog (S. cerevisiae)	protein-coding
common_peak2-27308-9-6-0.382258484346616-1.11707584880836	chr3	63905261	63905683	+	0	NA	intron (NM_019918, intron 4 of 5)	intron (NM_019918, intron 4 of 5)	19908	NM_019918	56544	Mm.57069	NM_019918	ENSMUSG00000027824	Vmn2r1	Casrl1|EG56544|V2r83	vomeronasal 2, receptor 1	protein-coding
unique_peak1-6708-14-5-1.31425365963649-1.4372489031793	chr8	34811354	34812216	+	0	NA	Intergenic	B1_Mur4|SINE|Alu	-30601	NM_001167921	68153	Mm.286104	NM_026584	ENSMUSG00000031585	Gtf2e2	34kDa|AI462509|C330006J08Rik	general transcription factor II E, polypeptide 2 (beta subunit)	protein-coding
unique_peak1-843-7-3-0.799090830298189-1.23214870625617	chr11	12397983	12398404	+	0	NA	Intergenic	RLTR11A|LTR|ERVK	-33230	NM_001282993	12808	Mm.22847	NM_172496	ENSMUSG00000020173	Cobl	-	cordon-bleu WH2 repeat	protein-coding
common_peak1-8481-10-7-0.356415345008769-1.12966497611638	chr10	80603340	80603841	+	0	NA	intron (NM_010731, intron 1 of 2)	intron (NM_010731, intron 1 of 2)	4574	NM_010731	16969	Mm.20920	NM_010731	ENSMUSG00000035011	Zbtb7a	9030619K07Rik|9130006G12Rik|AI452336|FBI-1|Lrf|Pokemon|Zbtb7	zinc finger and BTB domain containing 7a	protein-coding
common_peak1-17616-13-20--0.613845392140992-0.532159081577619	chr7	45526184	45526841	+	0	NA	Intergenic	Intergenic	993392	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak2-33501-5-14--1.61127093161437-1.95509489018123	chr11	72952323	72952744	+	0	NA	promoter-TSS (NM_010353)	promoter-TSS (NM_010353)	-737	NM_010353	14841	Mm.42045	NM_010353	ENSMUSG00000050107	Gsg2	Haspin	germ cell-specific gene 2	protein-coding
common_peak2-31438-15-24--0.631691439219068-0.650819692678081	chr8	104247952	104248578	+	0	NA	Intergenic	Intergenic	1060746	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
unique_peak1-6814-12-3-1.64877598508764-2.36932189928148	chr8	73132437	73133176	+	0	NA	promoter-TSS (NM_133772)	promoter-TSS (NM_133772)	-593	NM_133772	76900	Mm.6667	NM_133772	ENSMUSG00000070003	Ssbp4	1210002E11Rik|AW743380|Sspb4	single stranded DNA binding protein 4	protein-coding
common_peak1-12291-13-17--0.391452970804544-0.364171515310935	chr17	46027193	46027926	+	0	NA	Intergenic	MTC|LTR|MaLR	134553	NM_001110267	22339	Mm.282184	NM_009505	ENSMUSG00000023951	Vegfa	Vegf|Vpf	vascular endothelial growth factor A	protein-coding
common_peak2-21670-11-10-0.0492619656143161-0.31137425193576	chr11	103262163	103262653	+	0	NA	intron (NM_183034, intron 2 of 11)	B2_Mm2|SINE|B2	11570	NM_183034	353047	Mm.383308	NM_183034	ENSMUSG00000034247	Plekhm1	AP162|B2|BC038943|D330036J23Rik	pleckstrin homology domain containing, family M (with RUN domain) member 1	protein-coding
unique_peak2-38136-0-5--3.42509343119537-1.32905871926422	chr6	84297305	84297752	+	0	NA	Intergenic	ID_B1|SINE|B4	76304	NR_046063	100038556	Mm.387783	NR_046063		Gm10445	ENSMUSG00000072956	predicted gene 10445	ncRNA
unique_peak2-35228-1-4--1.94898510510411-1.10720996964787	chr16	92572428	92572759	+	0	NA	Intergenic	Lx8|LINE|L1	74201	NM_172469	209195	Mm.44747	NM_172469	ENSMUSG00000022949	Clic6	5730466J16Rik|AL022908|AW045520|CLIC1L	chloride intracellular channel 6	protein-coding
unique_peak2-33140-2-6--1.72480917832092-1.26211192963361	chr10	83637447	83637806	+	0	NA	Intergenic	MERVL-int|LTR|ERVL	265590	NM_001004363	77976	Mm.25874	NM_001004363	ENSMUSG00000020032	Nuak1	AU014801|AW494241|B230104P22Rik|Omphk1	NUAK family, SNF1-like kinase, 1	protein-coding
unique_peak2-36939-7-6--0.00826409175941478-0.97990265578305	chr3	104227704	104228114	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	87870	NM_001025067	269473	Mm.34855	NM_001025067	ENSMUSG00000032913	Lrig2	4632419I10Rik|BB096938	leucine-rich repeats and immunoglobulin-like domains 2	protein-coding
common_peak2-29762-14-12-0.198776442216552-0.373562084705529	chr6	87042887	87043276	+	0	NA	TTS (NM_013528)	TTS (NM_013528)	-11659	NM_001167938	52372	Mm.282851	NM_001167937		D6Ertd527e	AU043841	DNA segment, Chr 6, ERATO Doi 527, expressed	protein-coding
common_peak1-9984-13-8-0.608547029195456-0.660903317613904	chr13	28917443	28918091	+	0	NA	intron (NR_045053, intron 2 of 8)	B4A|SINE|B4	59524	NR_045054	72518	Mm.37454	NR_045053		2610307P16Rik	AI666457	RIKEN cDNA 2610307P16 gene	ncRNA
common_peak1-10405-14-5-1.31425365963649-1.4372489031793	chr13	98016154	98016854	+	0	NA	exon (NM_007930, exon 2 of 3)	exon (NM_007930, exon 2 of 3)	5444	NM_007930	13803	Mm.241073	NM_007930	ENSMUSG00000041773	Enc1	Nrpb|PIG10	ectodermal-neural cortex 1	protein-coding
common_peak1-7569-10-6-0.549060422951165-1.21398586181642	chr1	43819460	43820013	+	0	NA	intron (NM_026430, intron 10 of 14)	intron (NM_026430, intron 10 of 14)	32289	NM_024283	78896	Mm.50109	NM_024283	ENSMUSG00000026051	1500015O10Rik	Ecrg4	RIKEN cDNA 1500015O10 gene	protein-coding
unique_peak1-6555-8-8--0.164702583494742-1.00793137938329	chr7	130640305	130640853	+	0	NA	intron (NM_001081329, intron 2 of 6)	RSINE1|SINE|B4	3384	NM_001081329	210162	Mm.135397	NM_175435	ENSMUSG00000030757	Zkscan2	9430065N20Rik|AW493225|Zfp694	zinc finger with KRAB and SCAN domains 2	protein-coding
common_peak1-9907-19-17-0.232762325219374-0.392630012299441	chr12	86887824	86888733	+	0	NA	Intergenic	Intergenic	-51777	NM_001205052	81703	Mm.103560	NM_030887	ENSMUSG00000034271	Jdp2	Jundm2|Jundp2|TIF	Jun dimerization protein 2	protein-coding
unique_peak1-6145-9-2-1.60465090568306-1.87199725847353	chr6	135274235	135274759	+	0	NA	Intergenic	MIR3|SINE|MIR	-14095	NM_029595	76400	Mm.293018	NM_029595		Pbp2	1700023A18Rik|AI326308|Pebp-2|Pebp2	phosphatidylethanolamine binding protein 2	protein-coding
common_peak2-28830-76-121--0.168792951699605-0.437044798151685	chr5	66150357	66151985	+	0	NA	Intergenic	Intergenic	-3589	NM_001024917	333789	Mm.332398	NM_001024917	ENSMUSG00000037795	N4bp2	B3bp|E430014I16|Gm1791|Gm868	NEDD4 binding protein 2	protein-coding
common_peak1-17351-12-24--0.995080204687086-1.0220094258199	chr7	5062084	5062715	+	0	NA	exon (NM_001145013, exon 3 of 3)	exon (NM_001145013, exon 3 of 3)	6114	NM_001145013	192658	Mm.28764	NM_138954	ENSMUSG00000035191	Rfpl4	D7Ertd486e|Rfpl4a	ret finger protein-like 4	protein-coding
common_peak1-17801-55-62-0.227339947652785-0.531249876599846	chr7	99979468	99980699	+	0	NA	intron (NM_029494, intron 4 of 4)	Lx6|LINE|L1	42659	NM_001080995	74041	Mm.26468	NM_028729	ENSMUSG00000030641	Ddias	4632434I11Rik|noxin	DNA damage-induced apoptosis suppressor	protein-coding
common_peak2-31337-11-15--0.491306415748387-0.435191258261915	chr8	83740640	83741329	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-125477	NM_001024617	234515	Mm.324468	NM_001024617	ENSMUSG00000037940	Inpp4b	E130107I17Rik	inositol polyphosphate-4-phosphatase, type II	protein-coding
common_peak2-28269-10-10--0.103016273628528-0.301029995663987	chr4	127334911	127335404	+	0	NA	Intergenic	Intergenic	-299749	NM_010291	14622	Mm.26859	NM_010291	ENSMUSG00000042357	Gjb5	Cnx31.1|Cx31.1|Gjb-5	gap junction protein, beta 5	protein-coding
common_peak1-15704-14-9-0.577288065470282-0.630231561310125	chr4	140615489	140616239	+	0	NA	intron (NM_001145958, intron 1 of 35)	intron (NM_001145958, intron 1 of 35)	596	NM_001145958	230872	Mm.80685	NM_172122	ENSMUSG00000040860	Crocc	-	ciliary rootlet coiled-coil, rootletin	protein-coding
common_peak1-17320-48-26-1.21603964907135-3.744750681178	chr6	145713034	145714816	+	0	NA	Intergenic	Intergenic	-42978	NM_027760	71323	Mm.158669	NM_027760	ENSMUSG00000030259	Rassf8	5133400D11Rik|AA815821|AW123240|Hoj1|mHoj-1	Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	protein-coding
common_peak2-26135-20-27--0.319280137466411-0.412012472183092	chr2	12923857	12924767	+	0	NA	3' UTR (NM_008961, exon 5 of 5)	3' UTR (NM_008961, exon 5 of 5)	8179	NM_153155	227580	Mm.229322	NM_153155		C1ql3	1110065A22Rik|AI661623|C1ql|C1qtnf13|CTRP13|K100	C1q-like 3	protein-coding
unique_peak2-38046-8-5-0.420259917226415-1.10484139239135	chr6	39372446	39372769	+	0	NA	Intergenic	Intergenic	-2239	NM_018810	54484	Mm.270484	NM_018810	ENSMUSG00000029922	Mkrn1	RFP	makorin, ring finger protein, 1	protein-coding
unique_peak1-7229-6-1-1.5653981103803-1.56314192529759	chr9	74321106	74321601	+	0	NA	Intergenic	Intergenic	363212	NM_001033500	546144	Mm.335289	NM_177908	ENSMUSG00000044976	Wdr72	AW558070|D230040E23	WD repeat domain 72	protein-coding
common_peak1-10015-17-17-0.0483713367627256-0.325169893479371	chr13	6605663	6606482	+	0	NA	intron (NM_001291071, intron 8 of 21)	intron (NM_001291071, intron 8 of 21)	41945	NM_019703	56421	Mm.273874	NM_019703	ENSMUSG00000021196	Pfkp	1200015H23Rik|9330125N24Rik|ATP-PFK|PFK-C|PFK-P	phosphofructokinase, platelet	protein-coding
common_peak2-24580-10-7-0.356415345008769-1.12966497611638	chr17	31433502	31433924	+	0	NA	5' UTR (NM_001242427, exon 1 of 20)	5' UTR (NM_001242427, exon 1 of 20)	544	NM_001242427	224674	Mm.311395	NM_153062	ENSMUSG00000024036	Slc37a1	G3PP	solute carrier family 37 (glycerol-3-phosphate transporter), member 1	protein-coding
common_peak2-24921-9-11--0.395349094316936-0.344532117358383	chr17	87203661	87204209	+	0	NA	intron (NM_010137, intron 2 of 15)	intron (NM_010137, intron 2 of 15)	50731	NM_010137	13819	Mm.1415	NM_010137	ENSMUSG00000024140	Epas1	HIF-2alpha|HIF2A|HLF|HRF|MOP2|bHLHe73	endothelial PAS domain protein 1	protein-coding
common_peak1-11452-42-57--0.115651667260388-0.318638672819228	chr15	101265916	101266733	+	0	NA	intron (NM_001003668, intron 2 of 8)	intron (NM_001003668, intron 2 of 8)	2911	NM_001003668	406219	Mm.347934	NM_001003668	ENSMUSG00000047641	Krt83	Krt2-25	keratin 83	protein-coding
common_peak2-27893-19-21--0.0567442919756109-0.301029995663971	chr4	141147706	141148589	+	0	NA	intron (NM_133754, intron 3 of 8)	B3A|SINE|B2	7692	NM_001163256	74202	Mm.490327	NM_133754	ENSMUSG00000006219	Fblim1	2410043F08Rik|Cal|Fblp1|Gt10|migfilin|migfilin(s)	filamin binding LIM protein 1	protein-coding
unique_peak1-7067-8-1-2.00522241794757-2.05605744720049	chr9	14233922	14234440	+	0	NA	Intergenic	RLTR19-int|LTR|ERVK	-48495	NM_028013	71946	Mm.41423	NM_028013	ENSMUSG00000037419	Endod1	2210414F18Rik|2310067E08Rik|C85344	endonuclease domain containing 1	protein-coding
common_peak2-21359-67-79-0.222483387895632-0.548750809231233	chr11	78164880	78167028	+	0	NA	Intergenic	Intergenic	8930	NM_011676	22248	Mm.284811	NM_011676	ENSMUSG00000002058	Unc119	D11Bhm52|HRG4|MRG4|Rg4|Rtg4|Unc119h	unc-119 homolog (C. elegans)	protein-coding
common_peak1-7773-7-7--0.200909169701811-0.97990265578305	chr1	93343649	93344108	+	0	NA	intron (NM_011066, intron 4 of 22)	intron (NM_011066, intron 4 of 22)	12027	NM_011066	18627	Mm.482463	NM_011066	ENSMUSG00000055866	Per2	mKIAA0347|mPer2	period circadian clock 2	protein-coding
common_peak1-9528-15-10-0.552733131918359-0.604422558181019	chr11	115957908	115958642	+	0	NA	Intergenic	B3|SINE|B2	-9997	NM_016852	22378	Mm.284792	NM_016852	ENSMUSG00000034341	Wbp2	-	WW domain binding protein 2	protein-coding
common_peak2-29745-73-87-0.232963387787924-0.593954113235443	chr6	86404075	86405145	+	0	NA	intron (NM_146170, intron 6 of 9)	B1_Mm|SINE|Alu	15970	NM_001243741	232196	Mm.404040	NM_146170	ENSMUSG00000046679	C87436	-	expressed sequence C87436	protein-coding
common_peak1-19112-28-24-0.409102930046738-0.610902792227729	chr9	75422861	75423775	+	0	NA	intron (NM_001038710, intron 9 of 9)	intron (NM_001038710, intron 9 of 9)	-15854	NM_016963	50875	Mm.38445	NM_016963	ENSMUSG00000058587	Tmod3	U-Tmod|UTMOD	tropomodulin 3	protein-coding
unique_peak1-6380-7-4-0.477162735410827-1.09384600808989	chr7	72989679	72990040	+	0	NA	Intergenic	ORR1C2-int|LTR|MaLR	-17163	NM_001291184	18553	Mm.294007	NM_011048	ENSMUSG00000030513	Pcsk6	C86343|Pace4|SPC4	proprotein convertase subtilisin/kexin type 6	protein-coding
common_peak2-27752-6-5--0.0195643903408542-0.947717972411649	chr3	127790631	127790874	+	0	NA	Intergenic	Intergenic	143771	NR_045704	402774	Mm.209170	NR_045704		D030025E07Rik	-	RIKEN cDNA D030025E07 gene	ncRNA
common_peak1-10210-13-14--0.12841856497075-0.301029995663977	chr13	48966620	48967244	+	0	NA	promoter-TSS (NM_011078)	promoter-TSS (NM_011078)	-678	NM_011078	18676	Mm.486213	NM_011078	ENSMUSG00000038025	Phf2	GRC5	PHD finger protein 2	protein-coding
common_peak2-28737-32-19-0.957163924332297-1.82978420966174	chr5	36711826	36712691	+	0	NA	intron (NM_030889, intron 1 of 26)	intron (NM_030889, intron 1 of 26)	28530	NM_030889	81840	Mm.34113	NM_030889	ENSMUSG00000029093	Sorcs2	N28137|mKIAA1329	sortilin-related VPS10 domain containing receptor 2	protein-coding
common_peak2-24880-19-30--0.551508983725189-0.647723624534446	chr17	83351000	83351622	+	0	NA	Intergenic	Intergenic	126254	NR_045094	100503434	Mm.187281	NR_045094		Gm19689	-	predicted gene, 19689	ncRNA
common_peak2-28588-8-6-0.197867495889966-1.03789460276074	chr5	17557821	17558137	+	0	NA	Intergenic	Intergenic	89591	NM_001081143	242851	Mm.332230	NM_001081143	ENSMUSG00000028777	Gnat3	Ggust|Gtn	guanine nucleotide binding protein, alpha transducing 3	protein-coding
unique_peak1-140-17-6-1.41094141614743-1.84350559086818	chr1	70917973	70918957	+	0	NA	intron (NM_177164, intron 3 of 3)	intron (NM_177164, intron 3 of 3)	146176	NM_177164	320460	Mm.360649	NM_177164	ENSMUSG00000045648	Vwc2l	A830006F12Rik|Brl	von Willebrand factor C domain-containing protein 2-like	protein-coding
unique_peak1-4798-10-4-1.03448725012141-1.5150158574804	chr3	133209818	133210480	+	0	NA	Intergenic	Intergenic	-2795	NM_001040400	214133	Mm.347816	NM_145989	ENSMUSG00000040943	Tet2	Ayu17-449|E130014J05Rik|mKIAA1546	tet methylcytosine dioxygenase 2	protein-coding
common_peak2-25625-30-15-1.16967540949187-2.23573970698983	chr19	9071827	9072575	+	0	NA	intron (NR_104460, intron 1 of 6)	intron (NR_104460, intron 1 of 6)	8427	NM_001286518	66395	Mm.203866	NM_009643	ENSMUSG00000069833	Ahnak	DY6	AHNAK nucleoprotein (desmoyokin)	protein-coding
unique_peak2-35141-3-7--1.41398308995928-1.23214870625617	chr16	31081117	31081545	+	0	NA	exon (NM_198626, exon 1 of 4)	exon (NM_198626, exon 1 of 4)	187	NM_198626	268880	Mm.286693	NM_198626	ENSMUSG00000047434	Xxylt1	AI480653	xyloside xylosyltransferase 1	protein-coding
common_peak2-19676-14-33--1.18824668089269-1.80321929531239	chr1	57969380	57970093	+	0	NA	intron (NM_144882, intron 9 of 13)	intron (NM_144882, intron 9 of 13)	56632	NR_027630	51960	Mm.339711	NM_030211	ENSMUSG00000054770	Kctd18	4932411A20Rik|6530404F10Rik	potassium channel tetramerisation domain containing 18	protein-coding
common_peak1-17626-10-12--0.344024373132323-0.340565874754526	chr7	45830294	45830924	+	0	NA	Intergenic	Intergenic	689295	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak1-4869-10-1-2.35641534500877-2.57096726280955	chr4	11756305	11756822	+	0	NA	Intergenic	Intergenic	71259	NM_019753	12557	Mm.33402	NM_019753	ENSMUSG00000028217	Cdh17	HPT-1|HPT-1/LI	cadherin 17	protein-coding
unique_peak2-34906-1-4--1.94898510510411-1.10720996964787	chr15	83163130	83163511	+	0	NA	intron (NM_025445, intron 4 of 15)	intron (NM_025445, intron 4 of 15)	17357	NM_025445	66251	Mm.258910	NM_025445	ENSMUSG00000054277	Arfgap3	0610009H19Rik|1810004P07Rik|1810035F16Rik|9130416J18Rik|Arfgap1	ADP-ribosylation factor GTPase activating protein 3	protein-coding
common_peak1-15213-12-8-0.478850983645327-0.562038191119709	chr4	126468047	126468542	+	0	NA	intron (NM_001035526, intron 2 of 23)	B1_Mm|SINE|Alu	37280	NM_001035526	100317	Mm.206206	NM_133886	ENSMUSG00000028830	AU040320	A730047D20Rik|Kiaa0319l	expressed sequence AU040320	protein-coding
unique_peak2-34880-2-7--1.91745425626332-1.45399745587252	chr15	79061872	79062306	+	0	NA	intron (NM_001045558, intron 3 of 12)	ID_B1|SINE|B4	2277	NM_001045558	18693	Mm.259464	NM_008837	ENSMUSG00000068206	Pick1	Prkcabp	protein interacting with C kinase 1	protein-coding
common_peak1-13557-56-43-0.776164206801946-2.20923096619064	chr2	5950536	5952247	+	0	NA	intron (NM_001081132, intron 15 of 21)	intron (NM_001081132, intron 15 of 21)	78876	NM_001081132	326622	Mm.31102	NM_001081132	ENSMUSG00000043241	Upf2	-	UPF2 regulator of nonsense transcripts homolog (yeast)	protein-coding
unique_peak2-32859-7-14--1.10779976531033-0.817533494790411	chr10	96616248	96616814	+	0	NA	Intergenic	Intergenic	118129	NR_045358	75301	Mm.108650	NR_045358		4930556N09Rik	-	RIKEN cDNA 4930556N09 gene	ncRNA
unique_peak1-1407-7-0-2.79909083029819-2.40823996531185	chr12	76014851	76015357	+	0	NA	intron (NM_172805, intron 10 of 10)	L1_Mus1|LINE|L1	263215	NM_172805	238271	Mm.44465	NM_172805	ENSMUSG00000034402	Kcnh5	Eag2	potassium voltage-gated channel, subfamily H (eag-related), member 5	protein-coding
common_peak1-12056-11-9-0.186765489364251-0.344532117358383	chr17	22866808	22867300	+	0	NA	Intergenic	Lx5|LINE|L1	87660	NR_030709	100042679	Mm.484007	NR_030709		Gm16386	EG545191|ENSMUSG00000073442|Gm21017	zinc finger protein 946 pseudogene	pseudo
common_peak1-10765-9-12--0.510826311736872-0.394412252720706	chr14	70519613	70520213	+	0	NA	intron (NM_021328, intron 2 of 8)	MTEb|LTR|MaLR	19961	NM_021328	57784	Mm.24186	NM_021328	ENSMUSG00000022089	Bin3	1700015F07Rik	bridging integrator 3	protein-coding
common_peak1-19038-22-48--0.967425739027804-1.90173050117047	chr9	65032186	65033065	+	0	NA	intron (NM_008988, intron 13 of 13)	B1_Mur1|SINE|Alu	-29872	NM_177460	214424	Mm.31129	NM_177460	ENSMUSG00000032392	Parp16	ARTD15|BC055447|C79952|PARP-16	poly (ADP-ribose) polymerase family, member 16	protein-coding
common_peak1-14850-34-49--0.261787662773458-0.418071017975767	chr3	94953408	94954820	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	-7832	NM_027206	69769	Mm.34368	NM_027206	ENSMUSG00000013707	Tnfaip8l2	1810019A08Rik|AW610835|TIPE2	tumor necrosis factor, alpha-induced protein 8-like 2	protein-coding
unique_peak1-6017-13-2-2.19350952991661-3.03832868024006	chr6	109214204	109214705	+	0	NA	Intergenic	Intergenic	435819	NM_138677	192193	Mm.21596	NM_138677	ENSMUSG00000030104	Edem1	A130059K23Rik|EDEM|mKIAA0212	ER degradation enhancer, mannosidase alpha-like 1	protein-coding
common_peak2-26317-17-29--0.688594257403481-0.756750750680359	chr2	32846160	32847368	+	0	NA	intron (NM_178888, intron 26 of 28)	intron (NM_178888, intron 26 of 28)	-9188	NM_019488	56017	Mm.305754	NM_019488	ENSMUSG00000026791	Slc2a8	D2Ertd44e|GLUT8|GlutX1	solute carrier family 2, (facilitated glucose transporter), member 8	protein-coding
common_peak2-27400-10-22--1.16714661104824-1.30248952876293	chr3	88297147	88297816	+	0	NA	promoter-TSS (NM_019390)	promoter-TSS (NM_019390)	-247	NM_019390	16905	Mm.243014	NM_019390	ENSMUSG00000028063	Lmna	Dhe	lamin A	protein-coding
common_peak2-20983-41-54--0.0802110086759997-0.30922471743021	chr11	21370389	21371334	+	0	NA	Intergenic	MURVY-int|LTR|ERV1	40322	NR_028259	237694	Mm.72926	NM_172792	ENSMUSG00000078962	4932414J04Rik	-	RIKEN cDNA 4932414J04 gene	ncRNA
common_peak1-15924-12-11-0.0638134843664826-0.337263207250336	chr5	24604760	24605455	+	0	NA	intron (NM_145401, intron 1 of 15)	intron (NM_145401, intron 1 of 15)	1353	NM_145401	108099	Mm.33649	NM_145401	ENSMUSG00000028944	Prkag2	2410051C13Rik|AAKG|AAKG2|AI854673|H91620p|WPWS	protein kinase, AMP-activated, gamma 2 non-catalytic subunit	protein-coding
common_peak2-25729-22-21-0.187852486450107-0.376654945067947	chr19	24163506	24164589	+	0	NA	Intergenic	Intergenic	-58538	NM_001114174	381217	Mm.426078	NM_001114174	ENSMUSG00000071604	Fam189a2	AI414343|AI666772|Gm967	family with sequence similarity 189, member A2	protein-coding
common_peak2-27833-52-77--0.17714222859655-0.396265517229168	chr3	146851895	146852980	+	0	NA	Intergenic	Intergenic	337106	NM_027594	70892	Mm.187793	NM_027594	ENSMUSG00000036745	Ttll7	1110049N09Rik|4921517B04Rik|C630030B20|Ttll7s	tubulin tyrosine ligase-like family, member 7	protein-coding
unique_peak1-3548-18-7-1.31291915122835-1.71830443967823	chr19	24268969	24269975	+	0	NA	intron (NM_011597, intron 1 of 22)	intron (NM_011597, intron 1 of 22)	-20842	NM_001198985	21873	Mm.104744	NM_011597	ENSMUSG00000024812	Tjp2	ZO-2	tight junction protein 2	protein-coding
common_peak1-15260-34-55--0.425286395056338-0.680499470139652	chr4	21879490	21880536	+	0	NA	intron (NM_175234, intron 3 of 5)	intron (NM_175234, intron 3 of 5)	21540	NM_175234	76132	Mm.159689	NM_175234		Faxc	6230409E13Rik|AW742931	failed axon connections homolog (Drosophila)	protein-coding
common_peak2-25303-28-33--0.0345037214288766-0.301029995664001	chr18	73754086	73754792	+	0	NA	Intergenic	Intergenic	22080	NM_001039214	240396	Mm.24131	NM_001039214	ENSMUSG00000037253	Mex3c	A130001D14Rik|BC035207|BM-013|Rkhd2	mex3 homolog C (C. elegans)	protein-coding
unique_peak1-5058-9-4-0.867685311516858-1.36011389749466	chr4	135987267	135987766	+	0	NA	intron (NM_001285484, intron 1 of 1)	(TG)n|Simple_repeat|Simple_repeat	6989	NM_001285484	15552	Mm.40573	NM_008309	ENSMUSG00000070687	Htr1d	5-HT-1D|5-HT1D|AI853647|Gpcr14|Htr1db	5-hydroxytryptamine (serotonin) receptor 1D	protein-coding
common_peak2-23020-13-15--0.221527969362231-0.308519316180257	chr14	63543976	63544537	+	0	NA	intron (NM_175546, intron 4 of 11)	intron (NM_175546, intron 4 of 11)	59091	NM_001037751	432867	Mm.99387	NM_001037751	ENSMUSG00000075574	Defb48	Defb42|EG432867	defensin beta 48	protein-coding
unique_peak1-152-11-2-1.92373108353046-2.32232533660526	chr1	72456013	72456655	+	0	NA	Intergenic	ID_B1|SINE|B4	102339	NM_009533	22596	Mm.246952	NM_009533	ENSMUSG00000026187	Xrcc5	AI314015|Ku80|Ku86	X-ray repair complementing defective repair in Chinese hamster cells 5	protein-coding
unique_peak1-3480-15-4-1.69023665566829-1.97518968347063	chr19	10378877	10379673	+	0	NA	promoter-TSS (NM_198114)	promoter-TSS (NM_198114)	92	NM_198114	269060	Mm.329718	NM_198114	ENSMUSG00000035735	Dagla	Nsddr	diacylglycerol lipase, alpha	protein-coding
common_peak1-14566-17-34--0.910986678739929-1.23560027455358	chr3	37419042	37419713	+	0	NA	intron (NM_001163511, intron 14 of 15)	intron (NM_001163511, intron 14 of 15)	100175	NM_021343	57815	Mm.172679	NM_021343	ENSMUSG00000027722	Spata5	2510048F20Rik|C78064|Spaf	spermatogenesis associated 5	protein-coding
unique_peak2-33606-9-8-0.0196884049619079-1.03275496310833	chr11	94356573	94357137	+	0	NA	intron (NM_027984, intron 2 of 9)	intron (NM_027984, intron 2 of 9)	4433	NM_027984	71889	Mm.248620	NM_027984	ENSMUSG00000010080	Epn3	2310022G12Rik	epsin 3	protein-coding
common_peak2-29222-9-8-0.0196884049619079-1.03275496310833	chr5	137670646	137671183	+	0	NA	Intergenic	Intergenic	-58568	NM_009599	11423	Mm.255464	NM_009599	ENSMUSG00000023328	Ache	-	acetylcholinesterase	protein-coding
unique_peak1-897-11-1-2.50869358425161-2.83420869758413	chr11	35947349	35947942	+	0	NA	intron (NM_011856, intron 12 of 28)	intron (NM_011856, intron 12 of 28)	-154054	NM_170779	211652	Mm.31267	NM_170779		Wwc1	AA408228|AU017197|BC037006|Kibra|mKIAA0869	WW, C2 and coiled-coil domain containing 1	protein-coding
common_peak1-12116-10-11--0.228547155712387-0.31137425193576	chr17	26604782	26605390	+	0	NA	Intergenic	Intergenic	40331	NM_013642	19252	Mm.239041	NM_013642	ENSMUSG00000024190	Dusp1	3CH134|MKP1|Ptpn16|U19515|erp|mkp-1	dual specificity phosphatase 1	protein-coding
common_peak1-7662-14-15--0.100783839642355-0.301029995663982	chr1	74396559	74397240	+	0	NA	intron (NM_019999, intron 6 of 8)	(TG)n|Simple_repeat|Simple_repeat	-11783	NM_001033345	241112	Mm.310460	NM_001033345	ENSMUSG00000073650	Catip	Gm216	ciliogenesis associated TTC17 interacting protein	protein-coding
unique_peak1-4742-7-2-1.21412832957703-1.45399745587252	chr3	108373437	108373856	+	0	NA	promoter-TSS (NM_025444)	promoter-TSS (NM_025444)	-971	NM_025444	99730	Mm.24431	NM_025444		Taf13	1810004N01Rik|2010309N11Rik|AI847295|TAFII18	TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor	protein-coding
common_peak1-9345-31-11-1.64027617009197-3.52967372072617	chr11	96919620	96921013	+	0	NA	intron (NM_001081434, intron 13 of 22)	intron (NM_001081434, intron 13 of 22)	-4766	NR_106181	102465893		NR_106181		Mir8103	mmu-mir-8103	microRNA mir-8103	ncRNA
unique_peak1-133-10-1-2.35641534500877-2.57096726280955	chr1	64826933	64827456	+	0	NA	Intergenic	URR1B|DNA|MER1_type	-42870	NM_022721	14367	Mm.150813	NM_022721	ENSMUSG00000045005	Fzd5	5330434N09Rik|AI427138|Fz-5|Fz5|mFz5	frizzled homolog 5 (Drosophila)	protein-coding
common_peak1-9857-36-18-1.23139357272417-2.89693331866911	chr12	80227724	80229288	+	0	NA	Intergenic	MERVL-int|LTR|ERVL	-3269	NM_009705	11847	Mm.3506	NM_009705	ENSMUSG00000021125	Arg2	AII|AU022422	arginase type II	protein-coding
common_peak1-8009-26-30--0.0262972182284127-0.301029995663988	chr1	166137415	166138608	+	0	NA	exon (NM_007976, exon 19 of 25)	exon (NM_007976, exon 19 of 25)	-41166	NM_054087	116914	Mm.35444	NM_054087	ENSMUSG00000040918	Slc19a2	AV276020|AW322295|DDA1|THTR1|TRMA	solute carrier family 19 (thiamine transporter), member 2	protein-coding
common_peak1-19250-8-8--0.164702583494742-1.00793137938329	chr9	110316392	110316908	+	0	NA	Intergenic	Intergenic	-5662	NM_008694	18054	Mm.236225	NM_008694	ENSMUSG00000032484	Ngp	bectenecin	neutrophilic granule protein	protein-coding
unique_peak2-34201-2-6--1.72480917832092-1.26211192963361	chr13	41318869	41319196	+	0	NA	Intergenic	Lx8|LINE|L1	-3260	NM_019423	54326	Mm.2567	NM_019423	ENSMUSG00000021364	Elovl2	AI317360|Ssc2	elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 2	protein-coding
unique_peak1-1779-17-3-2.21829633820504-3.11807310444576	chr14	7815504	7816340	+	0	NA	Intergenic	Intergenic	44041	NM_001164727	100038847	Mm.443041	NM_001164727	ENSMUSG00000093985	Gm10406	ENSMUSG00000072735	predicted gene 10406	protein-coding
common_peak1-17736-24-11-1.20824740204656-1.9654245668484	chr7	80787110	80787831	+	0	NA	Intergenic	(TTC)n|Simple_repeat|Simple_repeat	43979	NR_033604	244061	Mm.484605	NR_033604		Gm4971	EG244061	Smad nuclear interacting protein 1 pseudogene	pseudo
unique_peak2-33729-6-9--0.75652998450706-1.11707584880836	chr11	115823930	115824279	+	0	NA	intron (NM_020483, intron 9 of 10)	intron (NM_020483, intron 9 of 10)	-11935	NM_001005608	192897	Mm.213873	NM_133663	ENSMUSG00000020758	Itgb4	AA407042|C230078O20|CD104	integrin beta 4	protein-coding
common_peak2-24518-21-27--0.237865656791368-0.339372226903478	chr17	26610646	26611270	+	0	NA	Intergenic	Intergenic	34459	NM_013642	19252	Mm.239041	NM_013642	ENSMUSG00000024190	Dusp1	3CH134|MKP1|Ptpn16|U19515|erp|mkp-1	dual specificity phosphatase 1	protein-coding
common_peak2-28685-14-22--0.624345795699369-0.590343908676233	chr5	32853496	32854471	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-59561	NM_001205133	22612	Mm.4558	NM_009535	ENSMUSG00000014932	Yes1	Yes|p61-Yes	Yamaguchi sarcoma viral (v-yes) oncogene homolog 1	protein-coding
unique_peak1-5319-26-7-1.92789909215846-3.64499996644214	chr5	77384660	77385613	+	0	NA	intron (NM_025939, intron 1 of 8)	intron (NM_025939, intron 1 of 8)	-4533	NM_172146	231327	Mm.202337	NM_172146	ENSMUSG00000029246	Ppat	5730454C12Rik|AA408689|AA675351|AI507113|C79945	phosphoribosyl pyrophosphate amidotransferase	protein-coding
common_peak1-14040-26-15-0.927899092158462-1.40782320807777	chr2	118489759	118490961	+	0	NA	intron (NM_001033254, intron 1 of 10)	intron (NM_001033254, intron 1 of 10)	1047	NM_001033254	214230	Mm.241857	NM_001033254	ENSMUSG00000074923	Pak6	4732456M09	p21 protein (Cdc42/Rac)-activated kinase 6	protein-coding
common_peak1-18767-15-8-0.842239749113344-0.891319708951327	chr8	126830303	126831031	+	0	NA	intron (NM_139272, intron 3 of 15)	intron (NM_139272, intron 3 of 15)	75373	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
unique_peak2-39748-12-11-0.0638134843664826-0.337263207250336	chrUn_GL456367	9362	9638	+	0	NA	NA	NA	NA	NA								
common_peak1-10476-7-7--0.200909169701811-0.97990265578305	chr13	113602428	113602915	+	0	NA	intron (NM_008903, intron 1 of 5)	B1_Mur4|SINE|Alu	11686	NM_008247	19012	Mm.317186	NM_008247	ENSMUSG00000021759	Ppap2a	Hic53|Hpic53|LPP-1|LPP1|PAP-2a|PAP2-alpha|PAP2a|mPAP	phosphatidic acid phosphatase type 2A	protein-coding
common_peak2-25624-22-16-0.559821263837065-0.733541631673787	chr19	9070674	9071677	+	0	NA	intron (NR_104460, intron 1 of 6)	B3A|SINE|B2	7401	NM_001286518	66395	Mm.203866	NM_009643	ENSMUSG00000069833	Ahnak	DY6	AHNAK nucleoprotein (desmoyokin)	protein-coding
common_peak1-19433-22-37--0.600643408356181-0.808568985218824	chrX	85574021	85574730	+	0	NA	Intergenic	Lx6|LINE|L1	-213413	NM_001160403	331461	Mm.121680	NM_001160403		Il1rapl1	6330532G10Rik|C030039N24|IL1R8|IL1RAPL|MRX34|OPHN4|TIGIRR-2	interleukin 1 receptor accessory protein-like 1	protein-coding
common_peak2-31096-32-39--0.0428360756677026-0.301029995663967	chr8	26119433	26120106	+	0	NA	intron (NM_007404, intron 1 of 22)	intron (NM_007404, intron 1 of 22)	7625	NM_001270996	11502	Mm.28908	NM_007404	ENSMUSG00000031555	Adam9	AU020942|MDC9|Mltng|mKIAA0021	a disintegrin and metallopeptidase domain 9 (meltrin gamma)	protein-coding
unique_peak2-34853-1-7--2.62705701021674-1.80617997398389	chr15	76538412	76538722	+	0	NA	exon (NM_058214, exon 8 of 22)	exon (NM_058214, exon 8 of 22)	2422	NM_058214	79456	Mm.18373	NM_058214	ENSMUSG00000033762	Recql4	RecQ4	RecQ protein-like 4	protein-coding
common_peak1-13545-16-15-0.118263642268062-0.328191099940264	chr2	3747932	3748764	+	0	NA	Intergenic	ORR1A4-int|LTR|MaLR	117618	NM_025626	66540	Mm.277864	NM_025626	ENSMUSG00000026655	Fam107b	3110001A13Rik|AA589595|AA959793|AI132312	family with sequence similarity 107, member B	protein-coding
unique_peak1-2916-10-4-1.03448725012141-1.5150158574804	chr17	47763065	47763580	+	0	NA	Intergenic	Intergenic	-4317	NM_198421	224836	Mm.59393	NM_198421		Usp49	C330046L10Rik|Gm545	ubiquitin specific peptidase 49	protein-coding
common_peak2-19697-61-85--0.0435154249527576-0.306200290196897	chr1	60179914	60181368	+	0	NA	intron (NM_001285463, intron 5 of 17)	intron (NM_001285463, intron 5 of 17)	15714	NR_104344	241066	Mm.276441	NM_139150	ENSMUSG00000026017	Carf	Als2cr8|ECBRC-FC1|ECBRC-FC2	calcium response factor	protein-coding
common_peak1-16604-29-41--0.28002734216365-0.403996330555226	chr5	150521999	150523181	+	0	NA	intron (NM_001081204, intron 4 of 14)	B3|SINE|B2	41758	NM_001081204	381694	Mm.45060	NM_001081204	ENSMUSG00000051950	B3glct	B3galtl|Gm1057	beta-3-glucosyltransferase	protein-coding
common_peak2-24225-30-47--0.415287091229283-0.618527319161325	chr16	85172790	85173791	+	0	NA	intron (NM_001198823, intron 1 of 17)	CpG	662	NM_001198825	11820	Mm.277585	NM_007471	ENSMUSG00000022892	App	Abeta|Abpp|Adap|Ag|Cvap|E030013M08Rik|betaApp	amyloid beta (A4) precursor protein	protein-coding
unique_peak2-36057-12-15--0.351224014912361-0.332077462497413	chr19	47512893	47513593	+	0	NA	intron (NM_001164717, intron 1 of 13)	intron (NM_001164717, intron 1 of 13)	25658	NM_001164717	14218	Mm.127560	NM_008018	ENSMUSG00000053617	Sh3pxd2a	2310014D11Rik|AA589508|AI256723|AI413738|C230050L11|EG329070|Fish|Gm5098|Sh3md1|TSK5|Tks5	SH3 and PX domains 2A	protein-coding
common_peak1-8926-26-24-0.284042902383738-0.446094173747083	chr11	52077160	52078102	+	0	NA	intron (NM_009331, intron 1 of 8)	intron (NM_009331, intron 1 of 8)	18121	NM_009331	21414	Mm.31630	NM_009331	ENSMUSG00000000782	Tcf7	AI465550|TCF-1|Tcf1	transcription factor 7, T cell specific	protein-coding
unique_peak2-38997-2-6--1.72480917832092-1.26211192963361	chr8	46551427	46551739	+	0	NA	Intergenic	Intergenic	-41559	NM_172752	234214	Mm.211096	NM_172752	ENSMUSG00000031626	Sorbs2	2010203O03Rik|9430041O17Rik|A530071H08|Argbp2|mKIAA0777	sorbin and SH3 domain containing 2	protein-coding
unique_peak2-33446-5-6--0.511735258063458-0.947717972411649	chr11	62819792	62820281	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	-55125	NM_027660	71062	Mm.23534	NM_027660	ENSMUSG00000042189	Tekt3	4933407G07Rik	tektin 3	protein-coding
unique_peak2-35659-7-11--0.785871670422967-1.21681515183528	chr18	5162299	5162821	+	0	NA	Intergenic	Intergenic	115973	NM_153153	225115	Mm.136791	NM_153153	ENSMUSG00000024236	Svil	AU024053|B430302E16Rik	supervillin	protein-coding
common_peak1-8629-67-66-0.478322292325223-1.3014705005645	chr10	120474497	120476327	+	0	NA	intron (NM_011915, intron 2 of 9)	intron (NM_011915, intron 2 of 9)	4352	NM_011915	24117	Mm.32831	NM_011915	ENSMUSG00000020218	Wif1	AW107799|WIF-1	Wnt inhibitory factor 1	protein-coding
common_peak1-13883-10-14--0.550475250599749-0.446472590016315	chr2	74578411	74578905	+	0	NA	intron (NM_010468, intron 1 of 2)	CpG	-12083	NR_110447	102634401	Mm.235021	NR_110447		LOC102634401	-	uncharacterized LOC102634401	ncRNA
common_peak1-17957-14-17--0.270708841084668-0.328191099940267	chr7	128611249	128611832	+	0	NA	intron (NM_001081327, intron 1 of 1)	intron (NM_001081327, intron 1 of 1)	75730	NM_001081327	195646	Mm.247449	NM_177575	ENSMUSG00000046321	Hs3st2	6430516N12Rik|A830061E14Rik|AW491345	heparan sulfate (glucosamine) 3-O-sulfotransferase 2	protein-coding
unique_peak1-1208-8-0-3.00522241794757-2.70926996097583	chr11	105959171	105959677	+	0	NA	intron (NM_011947, intron 2 of 15)	intron (NM_011947, intron 2 of 15)	13208	NM_011947	26406	Mm.27041	NM_011947	ENSMUSG00000020700	Map3k3	AW548911|MAPKKK3|Mekk3|mKIAA4031	mitogen-activated protein kinase kinase kinase 3	protein-coding
common_peak2-29416-15-17--0.157760250886656-0.307611222530528	chr6	4086513	4086933	+	0	NA	Intergenic	Intergenic	-49796	NM_009748	12068	Mm.286457	NM_009748	ENSMUSG00000032757	Bet1	AW555236|Bet-1	blocked early in transport 1 homolog (S. cerevisiae)	protein-coding
common_peak2-28348-26-37--0.320028421285123-0.460129356264038	chr4	135676812	135677940	+	0	NA	Intergenic	B4A|SINE|B4	-22361	NM_008321	15903	Mm.110	NM_008321		Id3	Hlh462|Idb3|bHLHb25	inhibitor of DNA binding 3	protein-coding
unique_peak2-34962-7-11--0.785871670422967-1.21681515183528	chr15	96743510	96744182	+	0	NA	Intergenic	B4A|SINE|B4	142541	NM_027052	69354	Mm.250980	NM_027052	ENSMUSG00000022464	Slc38a4	1110012E16Rik|1700012A18Rik|Ata3|mATA3|mNAT3	solute carrier family 38, member 4	protein-coding
common_peak2-26448-20-33--0.599388056659146-0.781990829058356	chr2	71528815	71529731	+	0	NA	Intergenic	Intergenic	-28201	NR_037979	381371	Mm.330284	NM_201366	ENSMUSG00000064263	Gm1631	-	predicted gene 1631	ncRNA
common_peak2-28727-25-19-0.539921810457743-0.756750750680359	chr5	36179055	36179755	+	0	NA	intron (NM_001177700, intron 9 of 16)	intron (NM_001177700, intron 9 of 16)	-56563	NM_027373	70292	Mm.125167	NM_027373	ENSMUSG00000029094	Afap1	2600003E23Rik|9630044L16Rik|AI848729|Afap|mKIAA3018	actin filament associated protein 1	protein-coding
common_peak2-22140-32-30-0.324895708832785-0.556669751231381	chr12	85959790	85961007	+	0	NA	Intergenic	Intergenic	-1982	NM_008992	19300	Mm.229109	NM_008992	ENSMUSG00000021240	Abcd4	P69r|P70R|Pxmp1l	ATP-binding cassette, sub-family D (ALD), member 4	protein-coding
unique_peak1-689-18-11-0.727956650507195-0.876666802405043	chr10	79823807	79824636	+	0	NA	exon (NM_183152, exon 11 of 15)	exon (NM_183152, exon 11 of 15)	5017	NM_183152	216166	Mm.17613	NM_183152	ENSMUSG00000035486	Plk5	6330514A18Rik	polo-like kinase 5	protein-coding
unique_peak2-32799-2-7--1.91745425626332-1.45399745587252	chr1	182907994	182908569	+	0	NA	Intergenic	(TCTG)n|Simple_repeat|Simple_repeat	35632	NM_144794	208795	Mm.185518	NM_144794	ENSMUSG00000026519	Tmem63a	BC014795|Tmem64a	transmembrane protein 63a	protein-coding
common_peak1-7644-30-14-1.26278481388335-2.47671208917977	chr1	71918065	71919444	+	0	NA	Intergenic	Intergenic	-15932	NR_027658	667931	Mm.214128	NR_027658		Gm8883	EG667931|Gm554	predicted gene 8883	ncRNA
common_peak1-11748-24-64--1.22915791026074-3.44325269351007	chr16	35983138	35984139	+	0	NA	intron (NM_008465, intron 1 of 13)	CpG	189	NM_008465	16646	Mm.6952	NM_008465	ENSMUSG00000022905	Kpna1	AW494490|IPOA5|NPI1|Rch2|mSRP1	karyopherin (importin) alpha 1	protein-coding
common_peak1-9034-92-105-0.364431629139566-1.16931963083322	chr11	62494105	62496436	+	0	NA	Intergenic	RLTR19B|LTR|ERVK	33104	NM_175002	216829	Mm.295306	NM_175002		Mmgt2	AI852046	membrane magnesium transporter 2	protein-coding
common_peak2-29531-10-15--0.643584654991231-0.519648556297791	chr6	38433169	38433790	+	0	NA	intron (NM_177185, intron 11 of 16)	intron (NM_177185, intron 11 of 16)	-23846	NR_106130	102466843		NR_106130		Mir7670	mmu-mir-7670	microRNA mir-7670	ncRNA
unique_peak2-35840-2-6--1.72480917832092-1.26211192963361	chr18	69918317	69918745	+	0	NA	Intergenic	Intergenic	-166682	NM_201362	381175	Mm.266831	NM_201362	ENSMUSG00000038903	Ccdc68	BC046343	coiled-coil domain containing 68	protein-coding
unique_peak2-37615-4-10--1.48289213249054-1.5150158574804	chr5	64610065	64610416	+	0	NA	intron (NM_019636, intron 2 of 19)	intron (NM_019636, intron 2 of 19)	-11356	NM_001289514	57915	Mm.286353	NM_019636	ENSMUSG00000029174	Tbc1d1	1110062G02Rik|AI385682|AW555803|Tbc1|mKIAA1108	TBC1 domain family, member 1	protein-coding
unique_peak1-2965-10-4-1.03448725012141-1.5150158574804	chr17	72639445	72639985	+	0	NA	intron (NM_007439, intron 3 of 28)	intron (NM_007439, intron 3 of 28)	313932	NM_007439	11682	Mm.311854	NM_007439	ENSMUSG00000055471	Alk	CD246|Tcrz	anaplastic lymphoma kinase	protein-coding
unique_peak1-1712-8-0-3.00522241794757-2.70926996097583	chr13	94072584	94073107	+	0	NA	Intergenic	Intergenic	-1605	NM_147176	26556	Mm.37533	NM_011982		Homer1	PSD-Zip45|SYN47|Ves-1|homer-1|vesl-1	homer homolog 1 (Drosophila)	protein-coding
common_peak1-18660-8-11--0.579740082773585-1.14218153353838	chr8	116992911	116993406	+	0	NA	intron (NM_019573, intron 4 of 8)	intron (NM_019573, intron 4 of 8)	29606	NM_019573	80707	Mm.440420	NM_019573	ENSMUSG00000004637	Wwox	5330426P09Rik|9030416C10Rik|WOX1	WW domain-containing oxidoreductase	protein-coding
unique_peak2-33335-2-4--1.23938235115068-0.931118710592187	chr11	20340463	20340781	+	0	NA	Intergenic	Intergenic	-102634	NM_021372	58172	Mm.339676	NM_021372	ENSMUSG00000049800	Sertad2	AB041541|AU021878|Kiaa0127|SEI-2|Sei2|TRIP-Br2|mKIAA0127	SERTA domain containing 2	protein-coding
common_peak1-13547-9-6-0.382258484346616-1.11707584880836	chr2	3750064	3750616	+	0	NA	Intergenic	B1_Mur2|SINE|Alu	119610	NM_025626	66540	Mm.277864	NM_025626	ENSMUSG00000026655	Fam107b	3110001A13Rik|AA589595|AA959793|AI132312	family with sequence similarity 107, member B	protein-coding
unique_peak2-37736-6-9--0.75652998450706-1.11707584880836	chr5	109923609	109924186	+	0	NA	Intergenic	Intergenic	64115	NM_016715	57914	Mm.35771	NM_016715	ENSMUSG00000033467	Crlf2	CRLM2|Ly114|Tpte2|Tslpr	cytokine receptor-like factor 2	protein-coding
common_peak2-24866-10-10--0.103016273628528-0.301029995663987	chr17	79599691	79600097	+	0	NA	Intergenic	Intergenic	148648	NM_027455	70536	Mm.293870	NM_027455	ENSMUSG00000024084	Qpct	5730422A13Rik	glutaminyl-peptide cyclotransferase (glutaminyl cyclase)	protein-coding
unique_peak1-5196-7-5-0.214128329577033-1.01466476204226	chr5	33336814	33337337	+	0	NA	TTS (NM_001170567)	TTS (NM_001170567)	-24390	NM_011738	22629	Mm.332314	NM_011738	ENSMUSG00000018965	Ywhah	-	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide	protein-coding
unique_peak1-6157-13-9-0.456543935750406-0.53895475198017	chr6	137514049	137514761	+	0	NA	intron (NM_001271588, intron 1 of 20)	intron (NM_001271588, intron 1 of 20)	5125	NM_001271595	13860	Mm.235346	NM_007945	ENSMUSG00000015766	Eps8	AW261790	epidermal growth factor receptor pathway substrate 8	protein-coding
common_peak1-15115-12-11-0.0638134843664826-0.337263207250336	chr3	136670684	136671274	+	0	NA	Intergenic	Intergenic	-333063	NM_001163522	59308	Mm.27343	NM_016885	ENSMUSG00000054690	Emcn	0610012K22Rik|AI315669|Muc14	endomucin	protein-coding
common_peak1-17726-12-6-0.841421063030034-1.58711810488664	chr7	80206822	80207567	+	0	NA	Intergenic	Intergenic	39760	NR_046024	625243	Mm.261798	NR_046024		Gm6567	-	predicted gene 6567	ncRNA
unique_peak1-1684-8-3-1.00522241794757-1.39487600375387	chr13	73740289	73740802	+	0	NA	promoter-TSS (NM_146047)	promoter-TSS (NM_146047)	-905	NM_146047	218335	Mm.30099	NM_146047	ENSMUSG00000021610	Clptm1l	C130052I12Rik|Crr9	CLPTM1-like	protein-coding
common_peak2-25545-10-18--0.891512168434816-0.804350088532826	chr19	6076693	6077253	+	0	NA	exon (NM_001081041, exon 1 of 10)	exon (NM_001081041, exon 1 of 10)	214	NM_001081041	68505	Mm.227361	NM_001081041	ENSMUSG00000024797	Vps51	1110014N23Rik|3110057M17Rik|AI837850|Ffr	vacuolar protein sorting 51 homolog (S. cerevisiae)	protein-coding
common_peak2-20328-27-19-0.669617856007873-1.02859851787301	chr10	128302517	128303179	+	0	NA	intron (NM_025364, intron 9 of 10)	intron (NM_025364, intron 9 of 10)	25926	NM_010272	14561	Mm.299218	NM_010272		Gdf11	BMP-11|Bmp11	growth differentiation factor 11	protein-coding
common_peak2-21151-13-7-0.778472030637769-0.817533494790411	chr11	58008394	58008792	+	0	NA	Intergenic	Intergenic	-4465	NM_018738	16145	Mm.33902	NM_018738	ENSMUSG00000078853	Igtp	AW558444|Irgm3	interferon gamma induced GTPase	protein-coding
common_peak1-8116-8-11--0.579740082773585-1.14218153353838	chr1	184139777	184140213	+	0	NA	Intergenic	Intergenic	-51766	NM_001166728	625823	Mm.479992	NM_001166728		Vmn1r1	EG625823|Gm6628	vomeronasal 1 receptor 1	protein-coding
common_peak2-21124-21-21-0.110057646628938-0.344491671143527	chr11	53858835	53859647	+	0	NA	Intergenic	Intergenic	-17649	NM_019687	30805	Mm.274590	NM_019687	ENSMUSG00000020334	Slc22a4	Octn1	solute carrier family 22 (organic cation transporter), member 4	protein-coding
common_peak2-26701-15-33--1.07529809069468-1.60877160026698	chr2	127247938	127248716	+	0	NA	Intergenic	Intergenic	-2608	NM_001081089	215456	Mm.440454	NM_001081089	ENSMUSG00000046338	Gpat2	A530057A03Rik|Gm116|xGPAT1	glycerol-3-phosphate acyltransferase 2, mitochondrial	protein-coding
unique_peak1-1098-28-14-1.14606852421294-2.01759298435799	chr11	88954350	88955649	+	0	NA	TTS (NM_001033266)	TTS (NM_001033266)	19844	NM_001033266	217071	Mm.342127	NM_001033266	ENSMUSG00000072553	Gm525	-	predicted gene 525	protein-coding
unique_peak2-36178-6-6--0.241956811677302-0.947717972411649	chr2	29716374	29716805	+	0	NA	Intergenic	B1F1|SINE|Alu	-8425	NM_207298	99151	Mm.296336	NM_207298	ENSMUSG00000039787	Cercam	2600006K01Rik|AL024097|Ceecam1	cerebral endothelial cell adhesion molecule	protein-coding
common_peak1-16679-32-57--0.578888975907912-1.03825765497309	chr6	7844434	7845510	+	0	NA	Intergenic	Intergenic	49748	NM_052993	94192	Mm.102752	NM_052993	ENSMUSG00000042460	C1galt1	2210410E06Rik|AV284120|T-synthase	core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1	protein-coding
common_peak1-17265-18-33--0.774543690021988-1.00055860626307	chr6	134897893	134898453	+	0	NA	intron (NR_037956, intron 1 of 1)	intron (NR_037956, intron 1 of 1)	19063	NR_037955	381822	Mm.5935	NR_037955	ENSMUSG00000098318	1190002F15Rik	AI120476	RIKEN cDNA 1190002F15 gene	ncRNA
unique_peak1-4026-10-1-2.35641534500877-2.57096726280955	chr2	48374173	48374820	+	0	NA	Intergenic	Intergenic	-295133	NM_007396	11480	Mm.314338	NM_007396	ENSMUSG00000052155	Acvr2a	ActrIIa|Acvr2|TactrII	activin receptor IIA	protein-coding
common_peak1-11161-20-24--0.155781405183531-0.319918318021793	chr15	75940746	75941579	+	0	NA	exon (NM_144848, exon 2 of 2)	exon (NM_144848, exon 2 of 2)	9463	NM_144848	223650	Mm.259929	NM_144848		Eppk1	6230424I18Rik|EPIPL|EPIPL1|EPPK	epiplakin 1	protein-coding
unique_peak2-35553-3-4--0.73591118484664-0.864171920961574	chr17	65563848	65564247	+	0	NA	Intergenic	Intergenic	326075	NM_001008973	381107	Mm.141275	NM_001008973	ENSMUSG00000045036	Tmem232	E130009J12Rik|Gm940|Tes13-L|Tes13-S	transmembrane protein 232	protein-coding
unique_peak2-35486-5-7--0.704380336005853-1.01466476204226	chr17	45766666	45767096	+	0	NA	TTS (NM_001013767)	TTS (NM_001013767)	-27830	NM_001177469	653016	Mm.45676	NM_001177468	ENSMUSG00000079471	Gm7325	EG653016|Esgp	predicted gene 7325	protein-coding
unique_peak1-6409-17-4-1.89636824331768-2.60953805094651	chr7	81057572	81058418	+	0	NA	Intergenic	(TTTC)n|Simple_repeat|Simple_repeat	87185	NR_102375	100861851		NR_102375		Gm21269	-	predicted gene, 21269	ncRNA
common_peak2-20747-11-10-0.0492619656143161-0.31137425193576	chr10	111543353	111543950	+	0	NA	intron (NM_026223, intron 4 of 5)	URR1A|DNA|MER1_type	23241	NM_026223	67537	Mm.292351	NM_026223	ENSMUSG00000020214	Glipr1l2	4921508O11Rik	GLI pathogenesis-related 1 like 2	protein-coding
common_peak1-18067-37-44-0.034139975156144-0.310681778627721	chr8	4275462	4276546	+	0	NA	promoter-TSS (NM_011592)	promoter-TSS (NM_011592)	-99	NM_011592	21856	Mm.195249	NM_011592	ENSMUSG00000002949	Timm44	0710005E20Rik|D8Ertd118e|Mimt44|Tim44	translocase of inner mitochondrial membrane 44	protein-coding
common_peak2-27154-20-29--0.418815811017326-0.51032171069054	chr3	30511712	30512453	+	0	NA	intron (NM_030557, intron 6 of 7)	intron (NM_030557, intron 6 of 7)	11073	NM_001289621	80732	Mm.200378	NM_030557	ENSMUSG00000037730	Mynn	2810011C24Rik|AA415053|AI661031|AW049392|Mynr|SBBIZ1	myoneurin	protein-coding
common_peak1-15091-24-49--0.850646287007008-1.56058662248874	chr3	129830671	129831452	+	0	NA	Intergenic	Intergenic	-52702	NM_029838	77018	Mm.91728	NM_029838	ENSMUSG00000058897	Col25a1	2700062B08Rik|CLAC-P	collagen, type XXV, alpha 1	protein-coding
common_peak2-29779-26-25-0.22745937401737-0.399869693390336	chr6	88902187	88903115	+	0	NA	Intergenic	L1M4b|LINE|L1	50406	NM_011906	24100	Mm.284480	NM_011906	ENSMUSG00000002871	Tpra1	40kDa|Gpr175|Tpra40	transmembrane protein, adipocyte asscociated 1	protein-coding
unique_peak1-3929-7-1-1.79909083029819-1.80617997398389	chr2	27232125	27232559	+	0	NA	intron (NM_009500, intron 2 of 27)	intron (NM_009500, intron 2 of 27)	50003	NM_009500	22325	Mm.179011	NM_009500	ENSMUSG00000009621	Vav2	2810040F13Rik|AI847175	vav 2 oncogene	protein-coding
common_peak1-10548-11-11--0.0762689164695427-0.301029995663976	chr14	19823336	19823847	+	0	NA	Intergenic	Intergenic	-97450	NM_144839	218793	Mm.23551	NM_144839	ENSMUSG00000058317	Ube2e2	BC016265	ubiquitin-conjugating enzyme E2E 2	protein-coding
unique_peak2-33245-5-4--0.0263084308932156-0.909929411522249	chr10	126936534	126936904	+	0	NA	TTS (NM_001168292)	TTS (NM_001168292)	-2054	NM_177707	237611	Mm.32087	NM_177707	ENSMUSG00000040287	Stac3	9830125E18	SH3 and cysteine rich domain 3	protein-coding
common_peak2-31173-12-7-0.648775985087639-0.697979855752659	chr8	46225325	46225702	+	0	NA	Intergenic	Intergenic	24986	NR_040690	622523	Mm.390032	NR_040690		Gm6329	EG622523	predicted gene 6329	ncRNA
unique_peak1-673-12-6-0.841421063030034-1.58711810488664	chr10	67186908	67187496	+	0	NA	Intergenic	Intergenic	-175499	NM_001005419	211488	Mm.297250	NM_001005419	ENSMUSG00000057134	Ado	Gm237	2-aminoethanethiol (cysteamine) dioxygenase	protein-coding
common_peak2-22019-75-42-1.31280223704119-6.6702797651976	chr12	57542218	57543838	+	0	NA	Intergenic	Intergenic	87379	NR_045082	104798	Mm.310950	NR_045082		E030019B13Rik	AI413669	RIKEN cDNA E030019B13 gene	ncRNA
common_peak2-31440-16-14-0.211373046659543-0.364171515310935	chr8	104374775	104375653	+	0	NA	Intergenic	Intergenic	933797	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
common_peak1-9808-8-9--0.316705676939792-1.03275496310833	chr12	69461712	69462235	+	0	NA	Intergenic	Intergenic	-691715	NR_033146	100316870	Mm.379794	NR_033146		Gm17821	-	DDB1 and CUL4 associated factor 5 pseudogene	pseudo
common_peak2-22557-5-9--1.02630843089322-1.21398586181642	chr13	63155159	63155749	+	0	NA	intron (NM_001289926, intron 3 of 15)	Lx|LINE|L1	89201	NM_001289924	72061	Mm.188105	NM_028079	ENSMUSG00000021458	2010111I01Rik	2300006M17Rik|AP-O|Aopep	RIKEN cDNA 2010111I01 gene	protein-coding
common_peak1-14933-20-41--0.904242638187568-1.56490221051684	chr3	102203917	102204651	+	0	NA	Intergenic	L1MC|LINE|L1	-69558	NM_001112698	18049	Mm.1259	NM_013609	ENSMUSG00000027859	Ngf	Ngfb	nerve growth factor	protein-coding
common_peak1-17600-53-51-0.440533294274837-1.01621186439952	chr7	44848910	44850470	+	0	NA	Intergenic	Intergenic	1670214	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak2-31622-38-60--0.359284678264356-0.591158351830177	chr8	123065197	123066248	+	0	NA	intron (NM_001145896, intron 1 of 15)	intron (NM_001145896, intron 1 of 15)	3126	NR_106159	102466849		NR_106159		Mir7687	mmu-mir-7687	microRNA mir-7687	ncRNA
common_peak1-16487-9-10--0.269818212233077-1.05503135781948	chr5	138161172	138161763	+	0	NA	Intergenic	Intergenic	19759	NM_175521	243300	Mm.74750	NM_175521	ENSMUSG00000045348	Nyap1	6430598A04Rik	neuronal tyrosine-phosphorylated phosphoinositide 3-kinase adaptor 1	protein-coding
common_peak1-16651-11-12--0.191746133889479-0.310474156842889	chr6	94649888	94650445	+	0	NA	promoter-TSS (NM_008377)	promoter-TSS (NM_008377)	-27	NM_008377	16206	Mm.245210	NM_008377	ENSMUSG00000030029	Lrig1	D6Bwg0781e|Img|LIG-1	leucine-rich repeats and immunoglobulin-like domains 1	protein-coding
common_peak1-14355-18-22--0.210642804828661-0.321718508207525	chr2	166793496	166794395	+	0	NA	intron (NM_011490, intron 1 of 11)	intron (NM_011490, intron 1 of 11)	-3728	NR_111895	20853	Mm.73276	NM_011490	ENSMUSG00000039536	Stau1	5830401L18Rik|AW549911|C85792|Stau	staufen (RNA binding protein) homolog 1 (Drosophila)	protein-coding
unique_peak2-32806-2-8--2.08737925770563-1.65811743852845	chr1	184034663	184035086	+	0	NA	Intergenic	PB1D10|SINE|Alu	-19994	NM_012058	27058	Mm.303071	NM_012058	ENSMUSG00000026511	Srp9	9kDa	signal recognition particle 9	protein-coding
unique_peak2-37829-4-5--0.608423014574403-0.909929411522249	chr5	130172999	130173416	+	0	NA	intron (NM_172462, intron 1 of 2)	MTC|LTR|MaLR	2756	NM_172462	22648	Mm.135067	NM_172462	ENSMUSG00000051034	Zfp11	6720465D24|Krox-6|Zfp-11	zinc finger protein 11	protein-coding
common_peak2-20247-10-6-0.549060422951165-1.21398586181642	chr1	184066501	184066900	+	0	NA	Intergenic	L2c|LINE|L2	11832	NM_012058	27058	Mm.303071	NM_012058	ENSMUSG00000026511	Srp9	9kDa	signal recognition particle 9	protein-coding
common_peak2-23989-27-24-0.347689761120511-0.550049347815233	chr16	18288518	18289329	+	0	NA	intron (NM_033324, intron 1 of 13)	CpG	338	NM_033324	94223	Mm.447352	NM_033324	ENSMUSG00000022718	Dgcr8	D16H22S1742E|D16H22S788E|D16Wis2|Gy1|N41|Vo59c07	DiGeorge syndrome critical region gene 8	protein-coding
unique_peak2-39817-6-6--0.241956811677302-0.947717972411649	chrX	36902907	36903335	+	0	NA	Intergenic	Lx3_Mus|LINE|L1	203678	NM_001177380	78631	Mm.243738	NM_001177380	ENSMUSG00000079619	Cypt15	1700085A12Rik	cysteine-rich perinuclear theca 15	protein-coding
common_peak1-18504-35-48--0.183339585652704-0.360715883817177	chr8	86884793	86886078	+	0	NA	Intergenic	B3A|SINE|B2	-53828	NM_001252060	12286	Mm.334658	NM_007578	ENSMUSG00000034656	Cacna1a	APCA|BI|Caca1a|Cacnl1a4|Cav2.1|Ccha1a|EA2|FHM|HPCA|MHP|MHP1|SCA6|alpha1A|la|nmf352|rkr|tg	calcium channel, voltage-dependent, P/Q type, alpha 1A subunit	protein-coding
common_peak2-23978-8-7-0.00522241794757061-1.00793137938329	chr16	17734045	17734411	+	0	NA	Intergenic	CpG	-11188	NM_001040683	94112	Mm.208970	NM_033609	ENSMUSG00000012114	Med15	A230074L19Rik|AW536074|Pcqap|mPcqap	mediator complex subunit 15	protein-coding
common_peak2-22070-7-19--1.52283726458917-1.55050753388976	chr12	75818260	75819007	+	0	NA	Intergenic	Intergenic	420172	NM_198866	386753	Mm.341686	NM_198866	ENSMUSG00000029878	Dbpht2	Spot2	DNA binding protein with his-thr domain	protein-coding
common_peak2-26334-4-7--1.02346051385325-1.09384600808989	chr2	34826799	34827068	+	0	NA	Intergenic	Intergenic	-9641	NM_009421	22029	Mm.239514	NM_009421	ENSMUSG00000026875	Traf1	4732496E14Rik	TNF receptor-associated factor 1	protein-coding
common_peak1-13904-7-7--0.200909169701811-0.97990265578305	chr2	79519722	79520249	+	0	NA	Intergenic	Intergenic	-27952	NM_172420	75276	Mm.257373	NM_172420	ENSMUSG00000034683	Ppp1r1c	4930565M23Rik|4930579P15Rik	protein phosphatase 1, regulatory (inhibitor) subunit 1C	protein-coding
unique_peak1-3677-36-11-1.8943585854466-5.11006289713063	chr19	42016791	42018287	+	0	NA	TTS (NM_028152)	TTS (NM_028152)	9577	NM_023740	74168	Mm.20387	NM_023740	ENSMUSG00000025157	Zdhhc16	1500015N03Rik|Aph2	zinc finger, DHHC domain containing 16	protein-coding
unique_peak2-35149-5-8--0.874305337448166-1.10484139239135	chr16	32656707	32657156	+	0	NA	intron (NM_001110147, intron 1 of 13)	intron (NM_001110147, intron 1 of 13)	11352	NR_033493	675921	Mm.404316	NR_033493	ENSMUSG00000075265	Tnk2os	ENSMUSG00000075265|Gm10818	tyrosine kinase, non-receptor 2, opposite strand	ncRNA
unique_peak1-5838-12-1-2.64877598508764-3.36932189928148	chr6	72643080	72643723	+	0	NA	intron (NM_009332, intron 3 of 11)	B4A|SINE|B4	63576	NR_040421	100038714	Mm.321330	NR_040421		Gm15401	ENSMUSG00000072999|OTTMUSG00000021199	predicted gene 15401	ncRNA
unique_peak1-327-8-4-0.683294323060208-1.21878474469819	chr1	133084137	133084549	+	0	NA	intron (NM_018750, intron 2 of 5)	B1_Mur2|SINE|Alu	34559	NM_010709	16865	Mm.276294	NM_010709	ENSMUSG00000026427	Eif2d	D1Ertd5e|Lgtn	eukaryotic translation initiation factor 2D	protein-coding
unique_peak2-35880-4-11--1.6084230145744-1.68134727924692	chr18	82702527	82703065	+	0	NA	intron (NM_001025245, intron 3 of 3)	intron (NM_001025245, intron 3 of 3)	-21059	NM_001025256	17196	Mm.252063	NM_010777	ENSMUSG00000041607	Mbp	C76307|Hmbpr|R75289|golli-mbp|mld|shi	myelin basic protein	protein-coding
common_peak1-9224-17-15-0.218296338205038-0.403453972741633	chr11	84129148	84129727	+	0	NA	exon (NM_133360, exon 37 of 54)	exon (NM_133360, exon 37 of 54)	120497	NM_133360	107476	Mm.31374	NM_133360	ENSMUSG00000020532	Acaca	A530025K05Rik|Acac|Acc1|Gm738	acetyl-Coenzyme A carboxylase alpha	protein-coding
common_peak2-32389-22-43--0.812147513549893-1.34810744351377	chrX	134540998	134542130	+	0	NA	intron (NM_030688, intron 2 of 10)	intron (NM_030688, intron 2 of 10)	202555	NM_026469	67944	Mm.443280	NM_026469	ENSMUSG00000071686	Tex13a	1700025D03Rik	testis expressed 13A	protein-coding
common_peak2-29466-15-27--0.795190171501948-0.918917574080418	chr6	29768462	29769367	+	0	NA	intron (NM_001171000, intron 1 of 16)	polypyrimidine|Low_complexity|Low_complexity	-40682	NM_001171001	74340	Mm.210899	NM_021414	ENSMUSG00000029772	Ahcyl2	4631427C17Rik|AI227036|Adohcyase3|mKIAA0828	S-adenosylhomocysteine hydrolase-like 2	protein-coding
unique_peak1-2416-8-2-1.42025991722641-1.65811743852845	chr15	99713576	99714058	+	0	NA	Intergenic	RMER19C|LTR|ERVK	-7930	NM_001113545	65970	Mm.33207	NM_023063	ENSMUSG00000023022	Lima1	Eplin	LIM domain and actin binding 1	protein-coding
common_peak1-9229-15-14-0.105274154947137-0.330004445983672	chr11	84869305	84870103	+	0	NA	intron (NM_001029934, intron 6 of 33)	ORR1B1|LTR|MaLR	83753	NM_001029934	237898	Mm.178524	NM_001029934	ENSMUSG00000000804	Usp32	2900074J03Rik|6430526O11Rik|AW045245	ubiquitin specific peptidase 32	protein-coding
common_peak2-24869-31-62--0.752041252686793-1.68686384061123	chr17	80061011	80062484	+	0	NA	intron (NM_201361, intron 5 of 10)	intron (NM_201361, intron 5 of 10)	47507	NM_201361	381110	Mm.293063	NM_201361	ENSMUSG00000036368	Rmdn2	AW061290|Fam82a1|RMD-2|mRMD-2	regulator of microtubule dynamics 2	protein-coding
unique_peak1-1141-11-1-2.50869358425161-2.83420869758413	chr11	97322780	97323337	+	0	NA	intron (NM_021493, intron 6 of 18)	intron (NM_021493, intron 6 of 18)	11584	NM_021493	58996	Mm.394118	NM_021493	ENSMUSG00000049807	Arhgap23	A330041B18Rik	Rho GTPase activating protein 23	protein-coding
common_peak1-14538-10-9-0.0344872501214071-1.05503135781948	chr3	30976428	30977046	+	0	NA	Intergenic	Intergenic	-17243	NM_011386	20482	Mm.15406	NM_011386	ENSMUSG00000027660	Skil	Skir|SnoN|sno	SKI-like	protein-coding
common_peak1-12317-19-37--0.845240186781899-1.27201509741564	chr17	47501794	47502501	+	0	NA	Intergenic	Intergenic	-3689	NM_001146212	64657	Mm.216250	NM_183086	ENSMUSG00000034729	Mrps10	1110038B19Rik|AW743084|Rpms10	mitochondrial ribosomal protein S10	protein-coding
common_peak2-23236-34-35-0.212143525558954-0.439405572480892	chr15	8189627	8190576	+	0	NA	intron (NM_001162906, intron 38 of 52)	intron (NM_001162906, intron 38 of 52)	70995	NM_001162906	73692	Mm.164436	NM_001162906	ENSMUSG00000039801	2410089E03Rik	4732468D17Rik|b2b012Clo	RIKEN cDNA 2410089E03 gene	protein-coding
unique_peak2-33970-4-5--0.608423014574403-0.909929411522249	chr12	83596797	83597175	+	0	NA	Intergenic	Intergenic	-121039	NM_015812	50779	Mm.153013	NM_015812	ENSMUSG00000021219	Rgs6	-	regulator of G-protein signaling 6	protein-coding
common_peak2-26162-68-96--0.0299520628888317-0.302166897407475	chr2	18671882	18673122	+	0	NA	Intergenic	Intergenic	51853	NM_001001334	381350	Mm.330024	NM_001001334		BC061194	-	cDNA sequence BC061194	protein-coding
common_peak1-12779-23-7-1.72176750450908-2.82905316394614	chr18	61634506	61635468	+	0	NA	intron (NR_045419, intron 1 of 3)	(CA)n|Simple_repeat|Simple_repeat	9274	NR_045419	442846	Mm.417648	NR_045419		A530050N04Rik	-	RIKEN cDNA A530050N04 gene	ncRNA
common_peak1-19299-8-7-0.00522241794757061-1.00793137938329	chr9	121396068	121396583	+	0	NA	Intergenic	Intergenic	8487	NM_001284508	12424	Mm.2619	NM_031161	ENSMUSG00000032532	Cck	-	cholecystokinin	protein-coding
common_peak2-27907-35-55--0.3759846635951-0.620905664975282	chr4	4792416	4793368	+	0	NA	Intergenic	L1_Mus2|LINE|L1	-72439	NM_177730	242291	Mm.218889	NM_177730		Impad1	1110001C20Rik|AA408880|AI451589|AL022796|B230207P20|Jaws|gPAPP	inositol monophosphatase domain containing 1	protein-coding
common_peak2-29674-13-16--0.30899081061257-0.330004445983672	chr6	72344489	72345264	+	0	NA	Intergenic	PB1D10|SINE|Alu	-4215	NM_016794	22320	Mm.1838	NM_016794	ENSMUSG00000050732	Vamp8	AU041171|Edb|endobrevin	vesicle-associated membrane protein 8	protein-coding
common_peak2-26598-30-31-0.169675409491873-0.382130460680153	chr2	112367498	112368581	+	0	NA	intron (NM_028844, intron 2 of 5)	ORR1A4|LTR|MaLR	-31800	NM_001165935	74268	Mm.315125	NM_028844		Aven	1700013A01Rik|1700056A21Rik|mAven-L|mAven-S	apoptosis, caspase activation inhibitor	protein-coding
common_peak1-15530-17-32--0.826097781153416-1.02859851787301	chr4	118359799	118360545	+	0	NA	Intergenic	Intergenic	2883	NM_146713	258708	Mm.223142	NM_146713	ENSMUSG00000043383	Olfr1342	MOR258-3	olfactory receptor 1342	protein-coding
unique_peak2-38759-9-9--0.132314688483142-1.03275496310833	chr7	120867318	120867893	+	0	NA	Intergenic	B4A|SINE|B4	-41907	NM_145584	233744	Mm.334160	NM_145584	ENSMUSG00000038156	Spon1	AI666765|AW455831|BC020531|D330035F22Rik|FSP	spondin 1, (f-spondin) extracellular matrix protein	protein-coding
unique_peak1-6541-10-0-3.35641534500877-3.31132995230379	chr7	126861315	126861843	+	0	NA	exon (NM_145585, exon 3 of 4)	exon (NM_145585, exon 3 of 4)	2733	NM_145585	233802	Mm.26392	NM_145585	ENSMUSG00000030942	Thumpd1	6330575P11Rik	THUMP domain containing 1	protein-coding
common_peak2-30999-20-34--0.641208232353773-0.863762398024911	chr8	8659593	8661240	+	0	NA	intron (NM_010111, intron 1 of 4)	CpG	357	NM_010111	13642	Mm.209813	NM_010111	ENSMUSG00000001300	Efnb2	ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1	ephrin B2	protein-coding
unique_peak2-33980-8-8--0.164702583494742-1.00793137938329	chr12	85288029	85288498	+	0	NA	Intergenic	Intergenic	-3295	NM_023633	71952	Mm.251483	NM_023633	ENSMUSG00000046791	2410016O06Rik	MAPJD|NO66	RIKEN cDNA 2410016O06 gene	protein-coding
common_peak2-30095-9-7-0.18961340640422-1.05908390183068	chr6	135029280	135029740	+	0	NA	intron (NM_181444, intron 2 of 3)	intron (NM_181444, intron 2 of 3)	13830	NM_181444	232431	Mm.23575	NM_181444	ENSMUSG00000046733	Gprc5a	Rai3|Raig1	G protein-coupled receptor, family C, group 5, member A	protein-coding
unique_peak2-33463-1-15--3.62705701021674-3.91338994363176	chr11	68691215	68692026	+	0	NA	Intergenic	Intergenic	-10435	NM_177060	320040	Mm.305696	NM_177060		Rnf222	9930039A11Rik	ring finger protein 222	protein-coding
unique_peak2-35490-7-7--0.200909169701811-0.97990265578305	chr17	46153081	46153507	+	0	NA	TTS (NM_001110267)	TTS (NM_001110267)	8818	NM_001110267	22339	Mm.282184	NM_009505	ENSMUSG00000023951	Vegfa	Vegf|Vpf	vascular endothelial growth factor A	protein-coding
common_peak1-8240-22-14-0.740393509478886-0.983972868822056	chr10	14545017	14545900	+	0	NA	Intergenic	Intergenic	65363	NM_008703	18101	Mm.487342	NM_008703	ENSMUSG00000019865	Nmbr	BB182387	neuromedin B receptor	protein-coding
common_peak2-19609-14-12-0.198776442216552-0.373562084705529	chr1	34433669	34434157	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	56131	NR_039562	100628580		NR_039562	miRBase:MI0018011	Mir5103	mmu-mir-5103|mu-mir-5103	microRNA 5103	ncRNA
unique_peak2-36861-5-6--0.511735258063458-0.947717972411649	chr3	90433838	90434271	+	0	NA	Intergenic	Intergenic	17238	NM_011313	20200	Mm.100144	NM_011313	ENSMUSG00000001025	S100a6	2A9|5B10|CALCYCLIN|Cacy|PRA	S100 calcium binding protein A6 (calcyclin)	protein-coding
unique_peak1-175-9-6-0.382258484346616-1.11707584880836	chr1	74248110	74248647	+	0	NA	Intergenic	Intergenic	-7173	NM_178241	227288	Mm.337035	NM_178241	ENSMUSG00000048480	Cxcr1	Il8ra	chemokine (C-X-C motif) receptor 1	protein-coding
unique_peak1-4786-12-7-0.648775985087639-0.697979855752659	chr3	130943847	130944472	+	0	NA	intron (NM_008212, intron 5 of 7)	intron (NM_008212, intron 5 of 7)	30860	NM_008212	15107	Mm.260164	NM_008212	ENSMUSG00000027984	Hadh	AA409008|AU019341|AW742602|HCDH|Hadhsc|Schad	hydroxyacyl-Coenzyme A dehydrogenase	protein-coding
common_peak2-30779-27-21-0.532114332257938-0.800403172662453	chr7	126583129	126583817	+	0	NA	Intergenic	L1Md_T|LINE|L1	19313	NM_025989	67133	Mm.46403	NM_025989	ENSMUSG00000030954	Gp2	2310037I18Rik|AV060639	glycoprotein 2 (zymogen granule membrane)	protein-coding
unique_peak2-39477-2-11--2.50241675698448-2.32232533660526	chr9	57467588	57468063	+	0	NA	intron (NM_199222, intron 1 of 12)	intron (NM_199222, intron 1 of 12)	756	NM_199222	235416	Mm.295630	NM_199222	ENSMUSG00000056271	Lman1l	BC020188|slamp	lectin, mannose-binding 1 like	protein-coding
unique_peak2-35813-1-5--2.2120195109379-1.32905871926422	chr18	62805566	62805946	+	0	NA	intron (NM_001168423, intron 1 of 4)	RLTR13D6|LTR|ERVK	-49838	NM_001001803	408198	Mm.478742	NM_001001803	ENSMUSG00000060201	Spink7	EG408198|Ecg2	serine peptidase inhibitor, Kazal type 7 (putative)	protein-coding
common_peak1-14388-15-12-0.311725032414564-0.425539671739611	chr2	170133275	170133966	+	0	NA	Intergenic	Intergenic	-48241	NR_040610	73303	Mm.443297	NR_040610	ENSMUSG00000086999	Bcas1os2	1700040N02Rik	breast carcinoma amplified sequence 1, opposite strand 2	ncRNA
unique_peak1-4528-10-3-1.35641534500877-1.75805390616669	chr3	30977456	30977946	+	0	NA	Intergenic	B4A|SINE|B4	-16279	NM_011386	20482	Mm.15406	NM_011386	ENSMUSG00000027660	Skil	Skir|SnoN|sno	SKI-like	protein-coding
unique_peak1-5267-10-5-0.771452844287613-1.33892459842472	chr5	64531691	64532208	+	0	NA	Intergenic	Intergenic	-19550	NM_019636	57915	Mm.286353	NM_019636	ENSMUSG00000029174	Tbc1d1	1110062G02Rik|AI385682|AW555803|Tbc1|mKIAA1108	TBC1 domain family, member 1	protein-coding
common_peak1-11630-37-61--0.428203238901056-0.759155512401768	chr16	20716546	20717836	+	0	NA	promoter-TSS (NM_009900)	promoter-TSS (NM_009900)	-482	NM_009900	12724	Mm.177761	NM_009900	ENSMUSG00000022843	Clcn2	AL118368|ClC-2|Clc2|nmf240	chloride channel 2	protein-coding
unique_peak1-5923-13-4-1.45654393575041-2.23384849113406	chr6	89349246	89349951	+	0	NA	intron (NM_001167736, intron 5 of 6)	L2|LINE|L2	-36991	NM_008881	18844	Mm.3789	NM_008881	ENSMUSG00000030084	Plxna1	2600013D04Rik|NOV|PlexA1|Plxn1|mKIAA4053	plexin A1	protein-coding
common_peak1-17630-27-39--0.330382143992127-0.451135909022758	chr7	46919379	46920432	+	0	NA	Intergenic	ORR1E|LTR|MaLR	146769	NM_001004139	70227	Mm.333800	NM_001004139	ENSMUSG00000068959	Zfp619	3000002G13Rik	zinc finger protein 619	protein-coding
common_peak1-18125-25-29--0.0450406902634128-0.301029995663982	chr8	8392410	8393469	+	0	NA	Intergenic	ORR1C1|LTR|MaLR	267834	NM_010111	13642	Mm.209813	NM_010111	ENSMUSG00000001300	Efnb2	ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1	ephrin B2	protein-coding
unique_peak1-7344-18-4-1.99099105634099-2.82951996911245	chrX	8027213	8028082	+	0	NA	Intergenic	LTR65|LTR|ERV1	11205	NM_001001450	387132	Mm.379565	NM_001001450	ENSMUSG00000023165	Ssxb2	-	synovial sarcoma, X member B, breakpoint 2	protein-coding
unique_peak2-37260-5-12--1.40482005414695-1.62698961692433	chr4	106911696	106912221	+	0	NA	intron (NM_029985, intron 5 of 7)	B1_Mm|SINE|Alu	14180	NM_029985	77809	Mm.29681	NM_029985	ENSMUSG00000028617	Lrrc42	A930011F22Rik|AA536996	leucine rich repeat containing 42	protein-coding
unique_peak2-35354-4-5--0.608423014574403-0.909929411522249	chr17	25875528	25875891	+	0	NA	intron (NM_177822, intron 3 of 15)	GA-rich|Low_complexity|Low_complexity	2724	NM_177822	328783	Mm.183275	NM_177822	ENSMUSG00000041062	Mslnl	4732467B22	mesothelin-like	protein-coding
unique_peak1-1380-6-1-1.5653981103803-1.56314192529759	chr12	54533297	54533669	+	0	NA	intron (NM_013780, intron 2 of 11)	intron (NM_013780, intron 2 of 11)	183819	NM_013780	27386	Mm.247044	NM_013780	ENSMUSG00000021010	Npas3	4930423H22Rik|bHLHe12	neuronal PAS domain protein 3	protein-coding
common_peak1-17777-11-9-0.186765489364251-0.344532117358383	chr7	97128921	97129462	+	0	NA	5' UTR (NM_021876, exon 1 of 12)	5' UTR (NM_021876, exon 1 of 12)	295	NM_021876	13626	Mm.380914	NM_021876	ENSMUSG00000030619	Eed	ENSMUSG00000039373|l(7)5Rn|l7Rn5|lusk	embryonic ectoderm development	protein-coding
common_peak1-10052-26-35--0.24202590928385-0.384630725886657	chr13	20090397	20091454	+	0	NA	Intergenic	Intergenic	-91451	NM_080288	140580	Mm.342392	NM_080288	ENSMUSG00000041112	Elmo1	6330578D22Rik|C230095H21Rik|CED-12	engulfment and cell motility 1	protein-coding
common_peak1-13981-18-9-0.990991056340989-1.23014042908325	chr2	102142045	102142968	+	0	NA	3' UTR (NM_020267, exon 5 of 5)	3' UTR (NM_020267, exon 5 of 5)	98551	NM_020267	80985	Mm.315002	NM_020267	ENSMUSG00000027189	Trim44	Dipb|Mc7	tripartite motif-containing 44	protein-coding
unique_peak1-2605-9-1-2.18961340640422-2.31132995230379	chr16	33582015	33582522	+	0	NA	intron (NM_134251, intron 4 of 12)	intron (NM_134251, intron 4 of 12)	63587	NM_001083902	171286	Mm.35253	NM_134251	ENSMUSG00000035506	Slc12a8	CCC9|E330020C02Rik	solute carrier family 12 (potassium/chloride transporters), member 8	protein-coding
unique_peak2-39858-7-9--0.522837264589173-1.05908390183068	chrX	72274160	72274731	+	0	NA	intron (NM_181584, intron 2 of 9)	intron (NM_181584, intron 2 of 9)	55799	NM_181584	210710	Mm.267056	NM_181584	ENSMUSG00000032750	Gab3	5930433H21Rik	growth factor receptor bound protein 2-associated protein 3	protein-coding
unique_peak1-5600-12-2-2.06381348436648-2.79529063155376	chr6	71991289	71991909	+	0	NA	intron (NR_046180, intron 1 of 2)	Lx3C|LINE|L1	923	NR_046180	330350	Mm.246787	NR_046180		9130221F21Rik	9130221F21	RIKEN cDNA 9130221F21 gene	ncRNA
unique_peak2-35994-6-7--0.434601889619698-0.97990265578305	chr19	32337680	32338149	+	0	NA	intron (NM_001168525, intron 2 of 9)	RLTR21|LTR|ERVK	-52411	NM_001168526	208449	Mm.329810	NM_144792	ENSMUSG00000040451	Sgms1	9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23	sphingomyelin synthase 1	protein-coding
common_peak2-20068-14-6-1.09186123830004-1.16633110333236	chr1	153128521	153128988	+	0	NA	Intergenic	ID_B1|SINE|B4	-62874	NM_001039512	117198	Mm.33764	NM_028582	ENSMUSG00000023150	Ivns1abp	1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850	influenza virus NS1A binding protein	protein-coding
unique_peak1-5277-13-5-1.19350952991661-1.95509489018123	chr5	65479956	65480470	+	0	NA	Intergenic	Intergenic	-42257	NM_175174	71778	Mm.10281	NM_175174	ENSMUSG00000054920	Klhl5	1300013C10Rik	kelch-like 5	protein-coding
unique_peak1-53-12-2-2.06381348436648-2.79529063155376	chr1	31093973	31094495	+	0	NA	Intergenic	MTD|LTR|MaLR	-87634	NM_011200	19243	Mm.491181	NM_011200	ENSMUSG00000026064	Ptp4a1	AA415290|AU019864|C130021B01|Prl-1	protein tyrosine phosphatase 4a1	protein-coding
common_peak2-26381-28-46--0.501629731856175-0.767679714496325	chr2	48948597	48950523	+	0	NA	intron (NM_029924, intron 3 of 16)	intron (NM_029924, intron 3 of 16)	144532	NM_029924	109241	Mm.440436	NM_029924	ENSMUSG00000036792	Mbd5	9430004D19Rik|AA536666|AI426407|C030040A15Rik|Gm1630|OTTMUSG00000012483	methyl-CpG binding domain protein 5	protein-coding
common_peak1-14241-71-131--0.399949940638482-1.20713136986345	chr2	153740832	153742166	+	0	NA	Intergenic	Intergenic	-2467	NM_194357	378700	Mm.55392	NM_194357	ENSMUSG00000068008	Bpifb3	Lplunc3|Rya3	BPI fold containing family B, member 3	protein-coding
unique_peak2-36958-7-17--1.37083417114412-1.23399803405144	chr3	108653891	108654325	+	0	NA	Intergenic	Intergenic	-10688	NM_011504	20912	Mm.316894	NM_011504	ENSMUSG00000027882	Stxbp3a	Munc-18c|Stxbp3|Sxtbp3|Unc18-3	syntaxin binding protein 3A	protein-coding
common_peak1-11904-57-82--0.109006391267996-0.335178273031072	chr17	24034235	24036398	+	0	NA	promoter-TSS (NM_001039238)	promoter-TSS (NM_001039238)	-373	NM_001039238	630537	Mm.436677	NM_001039238	ENSMUSG00000096278	Dcpp2	Dcpp-2|EG630537|SPT-2	demilune cell and parotid protein 2	protein-coding
common_peak2-19922-11-11--0.0762689164695427-0.301029995663976	chr1	125687494	125687997	+	0	NA	intron (NM_199021, intron 3 of 25)	RMER1A|Other|Other	254391	NM_199021	269109	Mm.483255	NM_199021	ENSMUSG00000036815	Dpp10	6430601K09Rik|DPP X|Dprp3	dipeptidylpeptidase 10	protein-coding
common_peak2-29287-31-38--0.0601635480491254-0.30392537800267	chr5	143731429	143732508	+	0	NA	intron (NM_007984, intron 3 of 4)	intron (NM_007984, intron 3 of 4)	9934	NM_007984	14086	Mm.289707	NM_007984	ENSMUSG00000029581	Fscn1	AI663989|Fan1|fascin-1	fascin homolog 1, actin bundling protein (Strongylocentrotus purpuratus)	protein-coding
unique_peak1-4495-11-5-0.923731083530457-1.477227296591	chr3	4690897	4691430	+	0	NA	Intergenic	Intergenic	-107545	NR_045272	100503859	Mm.75172	NR_045272	ENSMUSG00000098659	1110015O18Rik	-	RIKEN cDNA 1110015O18 gene	ncRNA
unique_peak2-37999-8-8--0.164702583494742-1.00793137938329	chr6	28789400	28789724	+	0	NA	intron (NM_019776, intron 16 of 23)	B1_Mur2|SINE|Alu	-7815	NM_138682	192198	Mm.443660	NM_138682	ENSMUSG00000049939	Lrrc4	MBAG1|NGL-2|NLG-2|Nag14	leucine rich repeat containing 4	protein-coding
unique_peak2-35572-4-7--1.02346051385325-1.09384600808989	chr17	70755289	70755567	+	0	NA	Intergenic	Intergenic	-18704	NM_177639	224997	Mm.311840	NM_027712	ENSMUSG00000003279	Dlgap1	4933422O14Rik|9630002F18|AI845682|AI848168|BB075781|D17Bwg0511e|GKAP/SAPAP|GKPA/SAPAP|Gkap|Sapap1|mKIAA4162	discs, large (Drosophila) homolog-associated protein 1	protein-coding
common_peak2-25866-30-8-1.99975040804956-4.4860419630448	chr19	43606769	43607334	+	0	NA	Intergenic	Intergenic	-7956	NM_010324	14718	Mm.19039	NM_010324	ENSMUSG00000025190	Got1	AI789014|Got-1|cAspAT|cCAT	glutamate oxaloacetate transaminase 1, soluble	protein-coding
common_peak2-20477-11-19--0.813234510635749-0.769930178837768	chr10	44079378	44080070	+	0	NA	TTS (NR_035450)	TTS (NR_035450)	242	NR_035450	100316688		NR_035450		Mir1929	mmu-mir-1929	microRNA 1929	ncRNA
unique_peak1-7125-8-0-3.00522241794757-2.70926996097583	chr9	47332069	47332640	+	0	NA	Intergenic	Intergenic	-6081	NM_207675	54725	Mm.234832	NM_018770	ENSMUSG00000032076	Cadm1	2900073G06Rik|3100001I08Rik|AI987920|Bl2|Igsf4|Igsf4a|Necl2|RA175|RA175A|RA175B|RA175C|RA175N|ST17|SgIGSF|SynCam|Tslc1	cell adhesion molecule 1	protein-coding
unique_peak1-6281-11-5-0.923731083530457-1.477227296591	chr7	28810715	28811217	+	0	NA	Intergenic	RLTR6-int|LTR|ERV1	-11832	NM_001254951	100043772	Mm.129275	NM_001100456		Zfp850	C130069I09Rik|Gm4636	zinc finger protein 850	protein-coding
common_peak1-13025-44-48-0.207182990453327-0.468749305398715	chr19	5447736	5449373	+	0	NA	intron (NM_010235, intron 1 of 3)	CpG	856	NM_010235	14283	Mm.6215	NM_010235	ENSMUSG00000024912	Fosl1	AW538199|Fra1|fra-1	fos-like antigen 1	protein-coding
common_peak1-11062-100-161--0.103078228073834-0.370640391468366	chr15	57694372	57696306	+	0	NA	Intergenic	Intergenic	28634	NM_024207	67819	Mm.289387	NM_024207	ENSMUSG00000022365	Derl1	1110021N07Rik|AI195141|AW551338|Derlin-1	Der1-like domain family, member 1	protein-coding
common_peak1-15994-35-68--0.677154198315665-1.53425852299322	chr5	33273930	33275308	+	0	NA	intron (NM_001025426, intron 25 of 42)	B2_Mm2|SINE|B2	68249	NM_001025426	277854	Mm.101524	NM_177786	ENSMUSG00000037426	Depdc5	AV016528	DEP domain containing 5	protein-coding
common_peak2-25503-43-48-0.167853341408494-0.404412720632912	chr19	5447923	5449170	+	0	NA	intron (NM_010235, intron 1 of 3)	CpG	848	NM_010235	14283	Mm.6215	NM_010235	ENSMUSG00000024912	Fosl1	AW538199|Fra1|fra-1	fos-like antigen 1	protein-coding
common_peak2-24586-22-57--1.21069689004017-3.08612073477863	chr17	31808000	31809099	+	0	NA	Intergenic	Tigger7|DNA|MER2_type	-6327	NM_013501	12954	Mm.1228	NM_013501	ENSMUSG00000024041	Cryaa	Acry-1|Crya-1|Crya1|DAcry-1|lop18	crystallin, alpha A	protein-coding
unique_peak1-3402-17-5-1.63333383748388-2.19184853030482	chr19	4665079	4666028	+	0	NA	intron (NM_001033447, intron 4 of 14)	RMER19B|LTR|ERVK	33115	NM_001033447	381196	Mm.297789	NM_001033447	ENSMUSG00000071691	Gm960	-	predicted gene 960	protein-coding
common_peak1-12316-22-20-0.254966682308644-0.421916810733237	chr17	47438642	47439596	+	0	NA	intron (NM_172622, intron 2 of 16)	intron (NM_172622, intron 2 of 16)	-66717	NM_001146212	64657	Mm.216250	NM_183086	ENSMUSG00000034729	Mrps10	1110038B19Rik|AW743084|Rpms10	mitochondrial ribosomal protein S10	protein-coding
unique_peak2-39922-2-6--1.72480917832092-1.26211192963361	chrX	103616657	103617175	+	0	NA	intron (NM_001007580, intron 26 of 26)	ID_B1|SINE|B4	63652	NM_001007580	333564	Mm.298000	NM_001007580	ENSMUSG00000033737	Fndc3c1	Fndc3c|Gm784	fibronectin type III domain containing 3C1	protein-coding
common_peak1-18232-30-45--0.35388654656514-0.51862626278861	chr8	26975947	26977052	+	0	NA	intron (NM_008432, intron 7 of 26)	intron (NM_008432, intron 7 of 26)	16404	NM_008432	16532	Mm.289679	NM_008432	ENSMUSG00000031576	Kcnu1	Kcnma3|Slo3|mSlo3	potassium channel, subfamily U, member 1	protein-coding
common_peak2-22975-14-18--0.348711353085941-0.360333814299795	chr14	54883304	54883996	+	0	NA	intron (NM_001205181, intron 4 of 6)	intron (NM_001205181, intron 4 of 6)	4743	NM_134076	105501	Mm.28771	NM_134076	ENSMUSG00000040997	Abhd4	1110035H23Rik|AI429574|Abh4	abhydrolase domain containing 4	protein-coding
common_peak2-23596-27-29-0.0846553552867171-0.333081040816753	chr15	80233909	80234727	+	0	NA	Intergenic	RMER15|LTR|ERVL	116650	NM_001044308	239556	Mm.291058	NM_001044308	ENSMUSG00000022416	Cacna1i	Ca(V)3.3	calcium channel, voltage-dependent, alpha 1I subunit	protein-coding
common_peak2-26495-19-15-0.402687326661686-0.519193887192487	chr2	84632650	84633443	+	0	NA	Intergenic	Intergenic	-5939	NM_019949	56791	Mm.38261	NM_019949	ENSMUSG00000027078	Ube2l6	2810489I21Rik|RIG-B|UBCH8|Ubce8|Ubcm8	ubiquitin-conjugating enzyme E2L 6	protein-coding
unique_peak1-4419-10-4-1.03448725012141-1.5150158574804	chr2	167806783	167807431	+	0	NA	intron (NM_001080708, intron 20 of 21)	intron (NM_001080708, intron 20 of 21)	28986	NM_001080708	69553	Mm.68454	NM_001080708	ENSMUSG00000074577	Fam65c	2310033K02Rik|Gm124	family with sequence similarity 65, member C	protein-coding
unique_peak1-6568-12-3-1.64877598508764-2.36932189928148	chr7	133637729	133638270	+	0	NA	exon (NM_183020, exon 17 of 23)	exon (NM_183020, exon 17 of 23)	7130	NM_001163713	233870	Mm.197829	NM_172745	ENSMUSG00000073838	Tufm	2300002G02Rik|C76308|C76389|EF-TuMT|EFTU	Tu translation elongation factor, mitochondrial	protein-coding
common_peak2-22752-11-11--0.0762689164695427-0.301029995663976	chr13	113046111	113046734	+	0	NA	Intergenic	Intergenic	-32237	NM_001168403	77318	Mm.159895	NM_029898	ENSMUSG00000049985	Ankrd55	C030011J08Rik	ankyrin repeat domain 55	protein-coding
common_peak1-17136-50-64-0.018572503450498-0.307711712824847	chr6	116005566	116007338	+	0	NA	intron (NM_177412, intron 3 of 5)	intron (NM_177412, intron 3 of 5)	-61429	NM_026376	67784	Mm.3085	NM_026376	ENSMUSG00000030123	Plxnd1	6230425C21Rik|b2b1863Clo|b2b553Clo	plexin D1	protein-coding
common_peak1-16191-23-29--0.185123091099438-0.336580821310529	chr5	92309241	92310310	+	0	NA	Intergenic	B3|SINE|B2	81807	NR_073442	68098	Mm.159453	NM_026557	ENSMUSG00000029397	Rchy1	ARNIP|CHIMP|Pirh2|Zfp363|Znf363	ring finger and CHY zinc finger domain containing 1	protein-coding
common_peak2-28874-10-6-0.549060422951165-1.21398586181642	chr5	77357856	77358185	+	0	NA	intron (NM_172146, intron 1 of 10)	intron (NM_172146, intron 1 of 10)	-22416	NM_025939	67054	Mm.182931	NM_025939	ENSMUSG00000029247	Paics	2610511I09Rik|ADE2H1|AIRC|PAIS	phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase	protein-coding
unique_peak1-101-12-6-0.841421063030034-1.58711810488664	chr1	53352074	53352695	+	0	NA	intron (NM_153556, intron 1 of 12)	intron (NM_153556, intron 1 of 12)	1456	NM_153556	227099	Mm.60499	NM_153556	ENSMUSG00000026098	Pms1	-	postmeiotic segregation increased 1 (S. cerevisiae)	protein-coding
common_peak1-13824-68-125--0.407319144201621-1.19213338930207	chr2	57237361	57238787	+	0	NA	Intergenic	Intergenic	147281	NM_010274	14571	Mm.3711	NM_010274	ENSMUSG00000026827	Gpd2	AA408484|AI448216|AU021455|AW494132|GPDH|Gdm1|Gpd-m|Gpdh-m|TISP38	glycerol phosphate dehydrogenase 2, mitochondrial	protein-coding
common_peak2-20459-15-27--0.795190171501948-0.918917574080418	chr10	42277900	42278671	+	0	NA	Intergenic	Intergenic	25109	NM_152229	21907	Mm.287100	NM_152229	ENSMUSG00000019803	Nr2e1	Mtl1|Mtll|TLL|Tlx|XTLL|fierce|frc|tailless	nuclear receptor subfamily 2, group E, member 1	protein-coding
unique_peak2-35664-7-15--1.20090916970181-0.947446088118041	chr18	6666544	6667346	+	0	NA	Intergenic	MMVL30-int|LTR|ERV1	63314	NM_027598	70901	Mm.158484	NM_027598	ENSMUSG00000039540	4921524L21Rik	-	RIKEN cDNA 4921524L21 gene	protein-coding
common_peak1-7980-15-16--0.075298090694683-0.301029995663976	chr1	160044067	160044807	+	0	NA	Intergenic	RMER1A|Other|Other	241954	NM_207583	240843	Mm.329579	NM_207583	ENSMUSG00000004031	Brinp2	6430517E21Rik|BB361039|Fam5b|mKIAA1747	bone morphogenic protein/retinoic acid inducible neural-specific 2	protein-coding
unique_peak1-1943-9-3-1.18961340640422-1.57096726280955	chr14	79535400	79535870	+	0	NA	intron (NM_027906, intron 37 of 44)	intron (NM_027906, intron 37 of 44)	111539	NM_001033215	105590	Mm.486536	NM_001033215	ENSMUSG00000071262	Zfp957	AU017455	zinc finger protein 957	protein-coding
common_peak2-26824-27-19-0.669617856007873-1.02859851787301	chr2	152696462	152697104	+	0	NA	intron (NM_001141977, intron 4 of 17)	B3|SINE|B2	5980	NR_049195	100885834		NR_049195	miRBase:MI0019190	Mir5622	mmu-mir-5622	microRNA mir-5622	ncRNA
common_peak1-18335-14-10-0.439784541720347-0.519648556297791	chr8	61606121	61606945	+	0	NA	Intergenic	Intergenic	215981	NM_173411	234290	Mm.39244	NM_173411	ENSMUSG00000049946	BC030500	-	cDNA sequence BC030500	protein-coding
unique_peak2-34444-0-18--5.0880584439178-4.7418463123268	chr14	21985689	21986491	+	0	NA	intron (NM_134079, intron 3 of 10)	intron (NM_134079, intron 3 of 10)	90716	NM_001243041	11534	Mm.188734	NM_134079	ENSMUSG00000039197	Adk	2310026J05Rik|5033405D03Rik|AI255373|AI987814|Ak	adenosine kinase	protein-coding
unique_peak1-3080-16-1-3.11826364226806-4.46429741251234	chr18	21107999	21108720	+	0	NA	intron (NM_026301, intron 1 of 5)	RLTR25B|LTR|ERVK	5233	NM_026301	67664	Mm.45980	NM_026301	ENSMUSG00000033107	Rnf125	4930553F04Rik	ring finger protein 125	protein-coding
unique_peak1-374-15-4-1.69023665566829-1.97518968347063	chr1	150025643	150026518	+	0	NA	Intergenic	Lx5|LINE|L1	1681263	NM_001145807	215378	Mm.441817	NM_153539	ENSMUSG00000035131	Brinp3	B830045N13Rik|Fam5c	bone morphogenetic protein/retinoic acid inducible neural specific 3	protein-coding
common_peak1-8576-24-28--0.0647710923598552-0.301029995663979	chr10	98915222	98916046	+	0	NA	Intergenic	Intergenic	-156171	NR_038019	100504202	Mm.403801	NR_038019		Gm20110	-	predicted gene, 20110	ncRNA
common_peak1-14444-7-22--1.72447112575882-2.07034318903805	chr2	181598707	181599145	+	0	NA	promoter-TSS (NM_025901)	promoter-TSS (NM_025901)	-139	NM_025901	67005	Mm.271986	NM_025901	ENSMUSG00000038628	Polr3k	12.3kDa|1500004O14Rik|AI196849|AU014893|C11|RPC10|RPC11	polymerase (RNA) III (DNA directed) polypeptide K	protein-coding
common_peak2-23366-10-7-0.356415345008769-1.12966497611638	chr15	53266521	53266801	+	0	NA	Intergenic	RMER1B|Other|Other	-88923	NM_010162	14042	Mm.309395	NM_010162		Ext1	AA409028	exostoses (multiple) 1	protein-coding
unique_peak1-3895-9-3-1.18961340640422-1.57096726280955	chr2	20559865	20560303	+	0	NA	intron (NM_001081006, intron 3 of 21)	MLT1A0|LTR|MaLR	118944	NM_001177631	208618	Mm.237935	NM_029895	ENSMUSG00000036617	Etl4	6620402G01Rik|9430077C05Rik|BC026657|E330027G05Rik|Etl-4|Skt	enhancer trap locus 4	protein-coding
common_peak1-13598-40-27-0.851620760693494-1.93089126088446	chr2	18392007	18393011	+	0	NA	Intergenic	Intergenic	-78052	NM_007869	13418	Mm.246674	NM_007869	ENSMUSG00000026740	Dnajc1	4733401K02Rik|AA960110|D230036H06Rik|Dnajl1|ERdj1|ERj1p|MTJ1	DnaJ (Hsp40) homolog, subfamily C, member 1	protein-coding
unique_peak2-32679-7-8--0.370834171144123-1.00793137938329	chr1	136177197	136177728	+	0	NA	Intergenic	(T)n|Simple_repeat|Simple_repeat	-9119	NM_031189	17928	Mm.16528	NM_031189	ENSMUSG00000026459	Myog	MYF4|bHLHc3|myo	myogenin	protein-coding
common_peak2-24529-5-5--0.289342836727009-0.909929411522249	chr17	27027530	27027972	+	0	NA	Intergenic	Intergenic	-26285	NM_053173	16580	Mm.491138	NM_016761	ENSMUSG00000024301	Kifc5b	Hset|KNSL2|Kifc5a	kinesin family member C5B	protein-coding
common_peak1-16966-20-20-0.0957573618124323-0.321718508207528	chr6	86365659	86366652	+	0	NA	intron (NM_001164078, intron 2 of 11)	intron (NM_001164078, intron 2 of 11)	11942	NM_001164078	21841	Mm.333219	NM_011585	ENSMUSG00000071337	Tia1	2310050N03Rik|AI256674|TIA-1|mTIA-1	cytotoxic granule-associated RNA binding protein 1	protein-coding
common_peak2-31292-16-20--0.274053780510699-0.353907621462756	chr8	72571359	72572092	+	0	NA	intron (NM_027481, intron 1 of 13)	B3|SINE|B2	5013	NM_027481	70616	Mm.17665	NM_027481	ENSMUSG00000011306	Sugp1	5730496N02Rik|Sf4	SURP and G patch domain containing 1	protein-coding
common_peak1-15786-27-74--1.23727273960064-4.01573438430963	chr4	155491237	155492087	+	0	NA	intron (NM_177205, intron 3 of 9)	intron (NM_177205, intron 3 of 9)	7555	NM_177205	230996	Mm.318925	NM_145557	ENSMUSG00000059939	9430015G10Rik	-	RIKEN cDNA 9430015G10 gene	protein-coding
unique_peak1-7121-10-2-1.77145284428761-2.09384600808989	chr9	46257725	46258165	+	0	NA	Intergenic	CT-rich|Low_complexity|Low_complexity	-129876	NM_183104	74361	Mm.159169	NM_183104	ENSMUSG00000056617	4931429L15Rik	-	RIKEN cDNA 4931429L15 gene	protein-coding
unique_peak1-7034-12-2-2.06381348436648-2.79529063155376	chr8	126814838	126815555	+	0	NA	intron (NM_139272, intron 1 of 15)	intron (NM_139272, intron 1 of 15)	59902	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
unique_peak1-3173-10-0-3.35641534500877-3.31132995230379	chr18	39356998	39357606	+	0	NA	intron (NM_175164, intron 11 of 22)	MIRb|SINE|MIR	204503	NM_175164	71302	Mm.329396	NM_175164	ENSMUSG00000036452	Arhgap26	1810044B20Rik|2610010G17Rik|4933432P15Rik|AI853435|mKIAA0621	Rho GTPase activating protein 26	protein-coding
common_peak1-8020-61-70-0.233002210244658-0.541174885372638	chr1	168596931	168599195	+	0	NA	intron (NM_172844, intron 7 of 9)	B2_Mm1t|SINE|B2	13913	NM_172844	240894	Mm.246610	NM_172844	ENSMUSG00000026560	Fmo9	4831428F09Rik	flavin containing monooxygenase 9	protein-coding
unique_peak1-5051-7-1-1.79909083029819-1.80617997398389	chr4	135306356	135306882	+	0	NA	exon (NM_178257, exon 7 of 7)	exon (NM_178257, exon 7 of 7)	-9011	NM_001085509	242702	Mm.318639	NM_001085509	ENSMUSG00000037139	Myom3	8430427K15Rik|Gm434	myomesin family, member 3	protein-coding
common_peak1-18728-15-22--0.511397205501357-0.50761186003982	chr8	123340930	123341613	+	0	NA	Intergenic	Intergenic	80995	NM_008320	15900	Mm.334861	NM_008320	ENSMUSG00000041515	Irf8	AI893568|ICSBP|IRF-8|Icsbp1|Myls	interferon regulatory factor 8	protein-coding
common_peak2-21864-78-155--0.478581124701714-1.81136380906086	chr12	51690791	51692739	+	0	NA	intron (NM_008858, intron 1 of 18)	Lx|LINE|L1	58445	NM_008858	18760	Mm.133719	NM_008858	ENSMUSG00000002688	Prkd1	PKD|PKD1|Pkcm|Prkcm	protein kinase D1	protein-coding
common_peak1-18415-21-10-1.11005764662894-1.59083646988122	chr8	73342208	73343169	+	0	NA	intron (NM_008353, intron 13 of 15)	RLTR25B|LTR|ERVK	10340	NM_008353	16161	Mm.731	NM_008353	ENSMUSG00000000791	Il12rb1	CD212|IL-12R[b]	interleukin 12 receptor, beta 1	protein-coding
common_peak2-31320-37-46--0.0285957801918189-0.301029995663982	chr8	79639332	79640436	+	0	NA	intron (NM_001083906, intron 3 of 8)	intron (NM_001083906, intron 3 of 8)	213477	NM_001083906	110784	Mm.324393	NM_001083906	ENSMUSG00000031618	Nr3c2	MR|Mlr	nuclear receptor subfamily 3, group C, member 2	protein-coding
common_peak2-21156-7-5-0.214128329577033-1.01466476204226	chr11	58199140	58199481	+	0	NA	intron (NM_001083884, intron 5 of 6)	intron (NM_001083884, intron 5 of 6)	6776	NM_001083884	70163	Mm.24119	NM_027339	ENSMUSG00000013643	Lypd8	2210415F13Rik	LY6/PLAUR domain containing 8	protein-coding
unique_peak1-7113-7-5-0.214128329577033-1.01466476204226	chr9	44498162	44498696	+	0	NA	intron (NM_153537, intron 20 of 21)	intron (NM_153537, intron 20 of 21)	17113	NM_021481	58866	Mm.45380	NM_021481	ENSMUSG00000032098	Treh	2210412M19Rik	trehalase (brush-border membrane glycoprotein)	protein-coding
unique_peak1-6251-7-5-0.214128329577033-1.01466476204226	chr7	19338321	19338769	+	0	NA	Intergenic	ETnERV2-int|LTR|ERVK	-33106	NR_024208	20958	Mm.423480	NR_024208		Sycp1-ps1	Sycp1-rs	synaptonemal complex protein 1, pseudogene 1	pseudo
common_peak1-9500-9-15--0.81038659359578-0.630231561310125	chr11	110357862	110358438	+	0	NA	intron (NM_011943, intron 8 of 11)	MLT1A0|LTR|MaLR	97714	NM_011943	26399	Mm.14487	NM_011943	ENSMUSG00000020623	Map2k6	MEK6|MKK6|Prkmk6|SAPKK3	mitogen-activated protein kinase kinase 6	protein-coding
common_peak2-22074-43-66--0.283526004934069-0.518477330661964	chr12	76369805	76371163	+	0	NA	Intergenic	Intergenic	-38816	NM_023275	80837	Mm.27467	NM_023275	ENSMUSG00000046768	Rhoj	1110005O19Rik|AW210585|Arhj|TC10L|TCL	ras homolog gene family, member J	protein-coding
common_peak1-11963-13-16--0.30899081061257-0.330004445983672	chr17	6654403	6654993	+	0	NA	intron (NM_001166627, intron 1 of 4).2	intron (NM_001166627, intron 1 of 4).2	258	NM_001166630	100040563	Mm.457381	NM_001166630		Dynlt1c	100040603|Dynlt1d	dynein light chain Tctex-type 1C	protein-coding
common_peak2-29436-43-49-0.138706995748978-0.376238101225474	chr6	13677174	13678021	+	0	NA	Intergenic	RLTR17|LTR|ERVK	-49631	NM_175312	101148	Mm.354863	NM_175312	ENSMUSG00000042742	B630005N14Rik	AI666701	RIKEN cDNA B630005N14 gene	protein-coding
common_peak2-30596-47-38-0.649439205904299-1.47201190833625	chr7	81344461	81345820	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	-186572	NM_009181	20450	Mm.4954	NM_009181	ENSMUSG00000025789	St8sia2	AI323367|ST8SiaII|STX|Siat8b	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2	protein-coding
common_peak1-13274-38-38-0.286050440436282-0.554098881286537	chr19	37375172	37376315	+	0	NA	intron (NM_031156, intron 11 of 23)	intron (NM_031156, intron 11 of 23)	29360	NM_031156	15925	Mm.28366	NM_031156	ENSMUSG00000056999	Ide	1300012G03Rik|4833415K22Rik|AA675336|AI507533	insulin degrading enzyme	protein-coding
common_peak2-23272-24-42--0.633054851934381-0.913161965438649	chr15	25940239	25941544	+	0	NA	Intergenic	Intergenic	26770	NM_144523	52521	Mm.29145	NM_144523	ENSMUSG00000052253	Zfp622	1110033B05Rik|D15Ertd806e|ZPR9|Znf622	zinc finger protein 622	protein-coding
common_peak1-18010-15-16--0.075298090694683-0.301029995663976	chr7	141216383	141217126	+	0	NA	intron (NM_007400, intron 3 of 22)	intron (NM_007400, intron 3 of 22)	200026	NM_007400	11489	Mm.439714	NM_007400	ENSMUSG00000054555	Adam12	Mltna|mKIAA4001	a disintegrin and metallopeptidase domain 12 (meltrin alpha)	protein-coding
common_peak2-22595-44-69--0.307390182376431-0.549574798715332	chr13	73330734	73331860	+	0	NA	Intergenic	MTE-int|LTR|MaLR	-66648	NM_018885	50916	Mm.103784	NM_018885	ENSMUSG00000021604	Irx4	-	Iroquois related homeobox 4 (Drosophila)	protein-coding
common_peak1-7628-15-20--0.380152672223105-0.397739447719386	chr1	64225452	64226195	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-57860	NM_033563	93691	Mm.29466	NM_033563	ENSMUSG00000025959	Klf7	9830124P08Rik	Kruppel-like factor 7 (ubiquitous)	protein-coding
unique_peak1-193-9-3-1.18961340640422-1.57096726280955	chr1	77694818	77695371	+	0	NA	Intergenic	MTE2a|LTR|MaLR	-183431	NM_007936	13838	Mm.400747	NM_007936	ENSMUSG00000026235	Epha4	2900005C20Rik|AI385584|Cek8|Hek8|Sek|Sek1|Tyro1|rb	Eph receptor A4	protein-coding
common_peak1-9815-27-42--0.434718803806862-0.595371917655149	chr12	69986374	69987305	+	0	NA	Intergenic	PB1D10|SINE|Alu	273334	NM_009093	20090	Mm.379006	NM_009093	ENSMUSG00000034892	Rps29	-	ribosomal protein S29	protein-coding
common_peak1-7794-43-65--0.261830933834751-0.482196053595805	chr1	106171772	106173413	+	0	NA	Intergenic	L1Md_T|LINE|L1	-492804	NM_011800	23836	Mm.103640	NM_011800	ENSMUSG00000050840	Cdh20	Cdh7	cadherin 20	protein-coding
common_peak2-25367-35-28-0.573389263334932-0.994385396256653	chr18	82522269	82523508	+	0	NA	Intergenic	L1_Mus2|LINE|L1	53281	NM_008082	14427	Mm.6219	NM_008082	ENSMUSG00000024553	Galr1	Galnr1	galanin receptor 1	protein-coding
unique_peak1-7066-7-0-2.79909083029819-2.40823996531185	chr9	14194010	14194474	+	0	NA	Intergenic	Intergenic	-8556	NM_028013	71946	Mm.41423	NM_028013	ENSMUSG00000037419	Endod1	2210414F18Rik|2310067E08Rik|C85344	endonuclease domain containing 1	protein-coding
common_peak1-15806-17-41--1.17402108457372-2.09421125609714	chr5	24444505	24445221	+	0	NA	intron (NM_145401, intron 4 of 15)	intron (NM_145401, intron 4 of 15)	-30536	NM_001170556	108099	Mm.33649	NM_145401	ENSMUSG00000028944	Prkag2	2410051C13Rik|AAKG|AAKG2|AI854673|H91620p|WPWS	protein kinase, AMP-activated, gamma 2 non-catalytic subunit	protein-coding
common_peak2-26081-13-10-0.319040412000471-0.446472590016315	chr2	144555678	144556174	+	0	NA	intron (NM_025314, intron 4 of 5)	L1MB8|LINE|L1	-93476	NM_025490	66328	Mm.45377	NM_025490	ENSMUSG00000027431	Scp2d1	1700010M22Rik	SCP2 sterol-binding domain containing 1	protein-coding
unique_peak2-34910-4-8--1.19338551529556-1.21878474469819	chr15	83173631	83174213	+	0	NA	intron (NM_025445, intron 1 of 15)	B4|SINE|B4	6755	NM_025445	66251	Mm.258910	NM_025445	ENSMUSG00000054277	Arfgap3	0610009H19Rik|1810004P07Rik|1810035F16Rik|9130416J18Rik|Arfgap1	ADP-ribosylation factor GTPase activating protein 3	protein-coding
common_peak1-14773-27-25-0.291106232754144-0.488172498216822	chr3	88592360	88593541	+	0	NA	intron (NR_028359, intron 3 of 17)	B1F|SINE|Alu	11971	NR_028359	100302730	Mm.482358	NR_028359		5830417I10Rik	3632445O20Rik|AA387005	gon-4-like pseudogene	pseudo
unique_peak1-3452-17-5-1.63333383748388-2.19184853030482	chr19	8688575	8689238	+	0	NA	Intergenic	Intergenic	-3580	NM_008766	18399	Mm.30090	NM_008766	ENSMUSG00000024650	Slc22a6	NKT|Oat1|Orctl1|mOat1	solute carrier family 22 (organic anion transporter), member 6	protein-coding
unique_peak2-32910-0-5--3.42509343119537-1.32905871926422	chr10	21887522	21887820	+	0	NA	intron (NM_009016, intron 1 of 9)	intron (NM_009016, intron 1 of 9)	-5656	NM_198193	379043	Mm.439724	NM_198193	ENSMUSG00000053219	Raet1e	-	retinoic acid early transcript 1E	protein-coding
unique_peak1-3754-11-5-0.923731083530457-1.477227296591	chr19	53482317	53482874	+	0	NA	Intergenic	Intergenic	-17532	NM_172429	76479	Mm.313687	NM_172429	ENSMUSG00000025024	Smndc1	2410004J23Rik|4933440I19Rik	survival motor neuron domain containing 1	protein-coding
common_peak1-11687-40-19-1.33704758786374-3.59866429024318	chr16	30396763	30397993	+	0	NA	Intergenic	Intergenic	-8762	NM_001128096	224088	Mm.8924	NM_001128094	ENSMUSG00000022533	Atp13a3	AU022875|Gm1745|Gm541|Gm542	ATPase type 13A3	protein-coding
common_peak2-24776-20-46--1.06651406708644-2.18062287223157	chr17	56934912	56935673	+	0	NA	intron (NM_009056, intron 5 of 16)	MYSERV16_I-int|LTR|ERVK	25593	NM_001195673	100504446	Mm.46157	NM_001195673	ENSMUSG00000090273	Prr22	Gm546	proline rich 22	protein-coding
unique_peak1-7258-9-4-0.867685311516858-1.36011389749466	chr9	88599082	88599546	+	0	NA	intron (NM_001128601, intron 2 of 2)	intron (NM_001128601, intron 2 of 2)	15322	NM_001128601	100039707	Mm.347377	NM_001128601	ENSMUSG00000079427	Gm2382	-	predicted gene 2382	protein-coding
common_peak1-13864-70-87-0.160535297738101-0.443139834627296	chr2	69722383	69723887	+	0	NA	intron (NM_029280, intron 1 of 6)	intron (NM_029280, intron 1 of 6)	537	NM_029280	75422	Mm.10508	NM_029280	ENSMUSG00000051730	Mettl5	2810410A08Rik	methyltransferase like 5	protein-coding
unique_peak1-5147-19-1-3.40268732666169-5.15699611159533	chr5	17518641	17519476	+	0	NA	intron (NM_001081143, intron 5 of 7)	intron (NM_001081143, intron 5 of 7)	50670	NM_001081143	242851	Mm.332230	NM_001081143	ENSMUSG00000028777	Gnat3	Ggust|Gtn	guanine nucleotide binding protein, alpha transducing 3	protein-coding
common_peak1-12630-25-28-0.00386891021753399-0.304839791830758	chr18	34372456	34373461	+	0	NA	intron (NR_040534, intron 1 of 1)	L1MC|LINE|L1	-7680	NM_007462	11789	Mm.384171	NM_007462	ENSMUSG00000005871	Apc	AI047805|AU020952|AW124434|CC1|Min|mAPC	adenomatosis polyposis coli	protein-coding
common_peak2-25254-233-200-1.05615156258796-17.3643746258773	chr18	65580073	65582125	+	0	NA	Intergenic	ORR1A2|LTR|MaLR	-9552	NM_172833	240354	Mm.132613	NM_172833	ENSMUSG00000032688	Malt1	A630046N12|D430033E09Rik	mucosa associated lymphoid tissue lymphoma translocation gene 1	protein-coding
common_peak1-12891-74-52-0.987966122415409-4.26354415801239	chr18	80554169	80556500	+	0	NA	intron (NM_001190373, intron 1 of 3)	intron (NM_001190373, intron 1 of 3)	5659	NM_001190373	240444	Mm.279568	NM_001190373	ENSMUSG00000059852	Kcng2	AA591524	potassium voltage-gated channel, subfamily G, member 2	protein-coding
unique_peak2-34033-5-7--0.704380336005853-1.01466476204226	chr12	111945758	111946258	+	0	NA	Intergenic	Intergenic	-11403	NM_010480	15519	Mm.1843	NM_010480	ENSMUSG00000021270	Hsp90aa1	86kDa|89kDa|AL024080|AL024147|Hsp86-1|Hsp89|Hsp90|Hspca|hsp4	heat shock protein 90, alpha (cytosolic), class A member 1	protein-coding
unique_peak1-3570-18-3-2.31291915122835-3.35694334496952	chr19	28677830	28678496	+	0	NA	intron (NM_175459, intron 2 of 10)	intron (NM_175459, intron 2 of 10)	-74551	NR_045330	320176	Mm.406716	NR_045330	ENSMUSG00000097735	D930032P07Rik	-	RIKEN cDNA D930032P07 gene	ncRNA
common_peak1-11138-54-28-1.31510476650216-4.65239418269556	chr15	72928716	72930299	+	0	NA	Intergenic	Intergenic	8665	NM_053068	93696	Mm.23095	NM_053068	ENSMUSG00000068391	Chrac1	2410152E03Rik|2810406L04Rik|YCL1	chromatin accessibility complex 1	protein-coding
unique_peak2-32908-3-11--1.99894559068043-1.95434855131066	chr10	20952665	20952980	+	0	NA	Intergenic	Intergenic	-62963	NM_001042593	56422	Mm.25527	NM_019702	ENSMUSG00000019977	Hbs1l	2810035F15Rik|AI326327|eRFS	Hbs1-like (S. cerevisiae)	protein-coding
common_peak1-8967-49-59-0.0993932274166651-0.345177777143024	chr11	58008867	58010135	+	0	NA	Intergenic	Intergenic	-3557	NM_018738	16145	Mm.33902	NM_018738	ENSMUSG00000078853	Igtp	AW558444|Irgm3	interferon gamma induced GTPase	protein-coding
unique_peak1-6689-9-5-0.604650905683064-1.21398586181642	chr8	26887524	26888068	+	0	NA	intron (NM_026121, intron 2 of 4)	B1_Mur3|SINE|Alu	7885	NM_026121	67384	Mm.118400	NM_026121	ENSMUSG00000037316	Bag4	2410112I15Rik|SODD	BCL2-associated athanogene 4	protein-coding
unique_peak2-39015-5-8--0.874305337448166-1.10484139239135	chr8	56294323	56294850	+	0	NA	Intergenic	Intergenic	254505	NM_001253756	234267	Mm.241700	NM_153581	ENSMUSG00000031517	Gpm6a	Gpm6|M6A	glycoprotein m6a	protein-coding
common_peak2-28720-9-7-0.18961340640422-1.05908390183068	chr5	36041851	36042223	+	0	NA	intron (NM_194344, intron 17 of 17)	intron (NM_194344, intron 17 of 17)	-19608	NM_030127	78558	Mm.274255	NM_030127	ENSMUSG00000029096	Htra3	2210021K23Rik|9530081K03Rik|Prsp|Tasp	HtrA serine peptidase 3	protein-coding
common_peak1-12444-17-18--0.0296311752385474-0.306899554715732	chr17	80127546	80128280	+	0	NA	Intergenic	Intergenic	-13532	NM_009994	13078	Mm.214016	NM_009994	ENSMUSG00000024087	Cyp1b1	CP1B|P4501b1	cytochrome P450, family 1, subfamily b, polypeptide 1	protein-coding
unique_peak2-33396-15-34--1.11711826638931-1.74023246399357	chr11	51857180	51858646	+	0	NA	intron (NM_001166654, intron 13 of 13)	(TG)n|Simple_repeat|Simple_repeat	40190	NM_001166653	213084	Mm.280557	NM_153785	ENSMUSG00000020389	Cdkl3	AI852479|B230379H01Rik	cyclin-dependent kinase-like 3	protein-coding
common_peak1-15880-7-12--0.901348887842903-1.31827279259406	chr5	8622253	8622710	+	0	NA	intron (NM_198620, intron 1 of 9)	CpG	471	NM_198620	242819	Mm.332192	NM_198620	ENSMUSG00000040570	Rundc3b	Gm440	RUN domain containing 3B	protein-coding
common_peak2-29162-40-56--0.173914331413643-0.351783812734557	chr5	130221977	130222872	+	0	NA	intron (NM_025450, intron 2 of 3)	B1F1|SINE|Alu	1021	NM_025450	66258	Mm.249809	NM_025450	ENSMUSG00000034211	Mrps17	1810006P02Rik|Mprs17	mitochondrial ribosomal protein S17	protein-coding
common_peak1-10912-42-45-0.218767371810171-0.478941451571433	chr15	5116526	5117572	+	0	NA	intron (NM_001013367, intron 3 of 8)	intron (NM_001013367, intron 3 of 8)	-18511	NM_026213	67515	Mm.254979	NM_026213	ENSMUSG00000022151	Ttc33	2410099M07Rik|2900001O04Rik|AI507072|AW538342|Osrf	tetratricopeptide repeat domain 33	protein-coding
common_peak2-21016-28-67--1.03450372142888-2.86200135898774	chr11	30266855	30268170	+	0	NA	Intergenic	Intergenic	104317	NM_001100394	75087	Mm.159422	NM_001100394	ENSMUSG00000040919	4930505A04Rik	-	RIKEN cDNA 4930505A04 gene	protein-coding
common_peak2-23716-10-9-0.0344872501214071-1.05503135781948	chr15	89475761	89476182	+	0	NA	Intergenic	Lx2|LINE|L1	-53617	NM_026817	68708	Mm.23258	NM_026817	ENSMUSG00000022621	Rabl2	1110031N17Rik|AW549303|Rabl2a	RAB, member RAS oncogene family-like 2	protein-coding
unique_peak1-1549-11-1-2.50869358425161-2.83420869758413	chr13	23729483	23730001	+	0	NA	Intergenic	MT2A|LTR|ERVL	-15315	NM_015787	50709	Mm.170587	NM_015787		Hist1h1e	H1-4|H1e|H1f4|H1s-4|H1var2	histone cluster 1, H1e	protein-coding
common_peak1-10639-27-25-0.291106232754144-0.488172498216822	chr14	46633880	46635336	+	0	NA	Intergenic	Intergenic	-69094	NR_002875	218963	Mm.282093	NR_002875		Gm1821	-	ubiquitin pseudogene	pseudo
common_peak1-18021-14-12-0.198776442216552-0.373562084705529	chr7	141562244	141562949	+	0	NA	intron (NM_001081331, intron 1 of 7)	L1MB7|LINE|L1	5915	NM_001081331	71007	Mm.334285	NM_001081331	ENSMUSG00000030994	D7Ertd443e	4933400E14Rik|FATS|Gm497	DNA segment, Chr 7, ERATO Doi 443, expressed	protein-coding
unique_peak1-6403-9-6-0.382258484346616-1.11707584880836	chr7	80442779	80443291	+	0	NA	Intergenic	(GGGA)n|Simple_repeat|Simple_repeat	-12231	NR_105062	100505025	Mm.445959	NR_105062		LOC100505025	-	uncharacterized LOC100505025	ncRNA
unique_peak2-36473-1-5--2.2120195109379-1.32905871926422	chr2	147744094	147744465	+	0	NA	Intergenic	Intergenic	126921	NM_001291067	15376	Mm.938	NM_010446	ENSMUSG00000037025	Foxa2	HNF3-beta|HNF3beta|Hnf-3b|Hnf3b|Tcf-3b|Tcf3b	forkhead box A2	protein-coding
unique_peak2-32993-9-13--0.617741515653384-0.459837087125828	chr10	60262114	60262593	+	0	NA	intron (NM_029770, intron 1 of 16)	intron (NM_029770, intron 1 of 16)	31976	NM_029770	107449	Mm.290433	NM_029770	ENSMUSG00000020099	Unc5b	6330415E02Rik|A630020F16|D10Bwg0792e|Unc5h2	unc-5 homolog B (C. elegans)	protein-coding
common_peak1-13403-16-7-1.11826364226806-1.23399803405144	chr19	47539500	47540180	+	0	NA	promoter-TSS (NM_008018)	promoter-TSS (NM_008018)	-939	NM_008018	14218	Mm.127560	NM_008018	ENSMUSG00000053617	Sh3pxd2a	2310014D11Rik|AA589508|AI256723|AI413738|C230050L11|EG329070|Fish|Gm5098|Sh3md1|TSK5|Tks5	SH3 and PX domains 2A	protein-coding
unique_peak2-37108-5-6--0.511735258063458-0.947717972411649	chr4	141131623	141132022	+	0	NA	TTS (NM_001163256)	TTS (NM_001163256)	24017	NM_001163256	74202	Mm.490327	NM_133754	ENSMUSG00000006219	Fblim1	2410043F08Rik|Cal|Fblp1|Gt10|migfilin|migfilin(s)	filamin binding LIM protein 1	protein-coding
unique_peak1-7380-9-1-2.18961340640422-2.31132995230379	chrX	74170710	74171217	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-322700	NM_001201395	74987	Mm.107996	NM_001201395	ENSMUSG00000079525	4930468A15Rik	-	RIKEN cDNA 4930468A15 gene	protein-coding
common_peak2-29473-18-7-1.31291915122835-1.71830443967823	chr6	30391166	30391634	+	0	NA	intron (NM_029742, intron 3 of 9)	intron (NM_029742, intron 3 of 9)	39491	NM_029742	76788	Mm.277308	NM_029742	ENSMUSG00000029775	Klhdc10	2410127E18Rik|AI593221|mKIAA0265	kelch domain containing 10	protein-coding
common_peak1-13107-37-30-0.571796761098944-1.03797455172871	chr19	8770301	8771773	+	0	NA	Intergenic	Intergenic	17350	NM_008577	17254	Mm.4114	NM_008577	ENSMUSG00000010095	Slc3a2	4F2|4F2HC|AI314110|Cd98|Ly-10|Ly-m10|Ly10|Mdu1|Mgp-2hc|NACAE	solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2	protein-coding
common_peak1-18199-30-29-0.262784813883354-0.465043498729215	chr8	22705928	22707068	+	0	NA	Intergenic	Intergenic	-1561	NM_001177518	665927	Mm.422762	NM_001177518	ENSMUSG00000079114	Gm7849	EG665927	predicted gene 7849	protein-coding
common_peak2-23848-29-58--0.770352968746731-1.54911055580826	chr15	102027966	102028987	+	0	NA	Intergenic	MTE2a|LTR|MaLR	-5600	NM_001289694	68744	Mm.352945	NM_153194	ENSMUSG00000046897	Zfp740	1110034O07Rik|AW548228|Znf740	zinc finger protein 740	protein-coding
common_peak1-11615-25-24-0.217993715570381-0.403610417161433	chr16	18288638	18289369	+	0	NA	intron (NM_033324, intron 1 of 13)	CpG	258	NM_033324	94223	Mm.447352	NM_033324	ENSMUSG00000022718	Dgcr8	D16H22S1742E|D16H22S788E|D16Wis2|Gy1|N41|Vo59c07	DiGeorge syndrome critical region gene 8	protein-coding
common_peak1-10281-54-82--0.201953669717191-0.442133957617833	chr13	59822174	59823601	+	0	NA	Intergenic	Intergenic	9242	NM_001167593	238662	Mm.295939	NM_001167593	ENSMUSG00000091311	Spata31d1b	EG238662|Fam75d1b|Gm4934	spermatogenesis associated 31 subfamily D, member 1B	protein-coding
unique_peak1-5060-11-1-2.50869358425161-2.83420869758413	chr4	136383755	136384485	+	0	NA	intron (NM_010142, intron 1 of 15)	intron (NM_010142, intron 1 of 15)	7806	NM_001290753	13844	Mm.250981	NM_010142	ENSMUSG00000028664	Ephb2	Cek5|Drt|ETECK|Erk|Hek5|Nuk|Prkm5|Qek5|Sek3|Tyro5	Eph receptor B2	protein-coding
common_peak1-14975-8-9--0.316705676939792-1.03275496310833	chr3	106684760	106685341	+	0	NA	Intergenic	Intergenic	-59575	NM_146489	258482	Mm.377527	NM_146489	ENSMUSG00000043529	Olfr266	MOR122-2	olfactory receptor 266	protein-coding
unique_peak1-5572-9-2-1.60465090568306-1.87199725847353	chr5	148563913	148564420	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-26602	NM_010228	14254	Mm.389712	NM_010228	ENSMUSG00000029648	Flt1	AI323757|Flt-1|VEGFR-1|VEGFR1|sFlt1	FMS-like tyrosine kinase 1	protein-coding
unique_peak1-3479-10-3-1.35641534500877-1.75805390616669	chr19	10293279	10293809	+	0	NA	exon (NM_001033481, exon 11 of 26)	exon (NM_001033481, exon 11 of 26)	13021	NM_001163431	69038	Mm.375100	NM_026919	ENSMUSG00000036372	Tmem258	1810006K21Rik	transmembrane protein 258	protein-coding
common_peak2-30856-14-15--0.100783839642355-0.301029995663982	chr7	138918961	138919450	+	0	NA	Intergenic	Intergenic	215300	NM_009774	12237	Mm.927	NM_009774	ENSMUSG00000066979	Bub3	AU019800|AU021329|AU043350|AW146323|C78067	budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae)	protein-coding
unique_peak2-38629-0-6--3.64748585253182-1.56314192529759	chr7	81212485	81212826	+	0	NA	Intergenic	RMER1B|Other|Other	-54087	NM_009181	20450	Mm.4954	NM_009181	ENSMUSG00000025789	St8sia2	AI323367|ST8SiaII|STX|Siat8b	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2	protein-coding
common_peak1-16192-21-30--0.384707045120639-0.446094173747089	chr5	92434181	92435235	+	0	NA	TTS (NM_001276315)	TTS (NM_001276315)	18209	NM_001177577	381651	Mm.332494	NM_001177577	ENSMUSG00000096035	Gm1045	-	predicted gene 1045	protein-coding
common_peak2-25765-83-94-0.344367016775179-1.03925822822702	chr19	32107628	32108406	+	0	NA	intron (NM_018830, intron 10 of 23)	L1Md_T|LINE|L1	69613	NM_018830	54447	Mm.491229	NM_018830	ENSMUSG00000024887	Asah2	AI585898	N-acylsphingosine amidohydrolase 2	protein-coding
unique_peak2-35364-5-11--1.28934283672701-1.477227296591	chr17	26954537	26955159	+	0	NA	Intergenic	Intergenic	23662	NM_008700	18091	Mm.41974	NM_008700	ENSMUSG00000015579	Nkx2-5	Csx|Nkx-2.5|Nkx2.5|tinman	NK2 homeobox 5	protein-coding
common_peak2-31997-11-11--0.0762689164695427-0.301029995663976	chr9	70838295	70838779	+	0	NA	Intergenic	Intergenic	-55922	NM_008280	15450	Mm.390187	NM_008280	ENSMUSG00000032207	Lipc	AI256194|HL|Hpl	lipase, hepatic	protein-coding
unique_peak1-3382-10-7-0.356415345008769-1.12966497611638	chr19	3825280	3825907	+	0	NA	Intergenic	ORR1A2|LTR|MaLR	-26180	NM_001271496	12660	Mm.225505	NM_013490	ENSMUSG00000024843	Chka	CK|CK/EK-alpha|Chetk-alpha|Chk|ChoK|EK|EtnK-alpha	choline kinase alpha	protein-coding
common_peak1-15176-23-18-0.473839991065495-0.618644178587689	chr3	152339908	152340784	+	0	NA	intron (NR_040386, intron 2 of 3)	MER3|DNA|MER1_type	-9242	NM_001081277	229949	Mm.207057	NM_001081277	ENSMUSG00000039058	Ak5	-	adenylate kinase 5	protein-coding
common_peak1-19434-182-347--0.165974960017305-0.75374218718155	chrX	94121997	94124028	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-144923	NM_001033361	245526	Mm.336164	NM_001033361	ENSMUSG00000031212	Pgr15l	-	G protein-coupled receptor 15-like	protein-coding
common_peak2-26181-8-10--0.454209200689727-1.078512453669	chr2	24563259	24563812	+	0	NA	intron (NM_001042528, intron 10 of 46)	intron (NM_001042528, intron 10 of 46)	55137	NM_001042528	12287	Mm.4424	NM_007579	ENSMUSG00000004113	Cacna1b	AW050276|AW060892|AW822256|Cav2.2|Cchn1a|alpha(1B)	calcium channel, voltage-dependent, N type, alpha 1B subunit	protein-coding
common_peak2-28146-34-50--0.290356814970229-0.452279894471924	chr4	101355929	101356741	+	0	NA	Intergenic	Intergenic	-33677	NM_001122899	16847	Mm.259282	NM_010704	ENSMUSG00000057722	Lepr	LEPROT|Leprb|Modb1|OB-RGRP|Obr|db|diabetes|obese-like|obl	leptin receptor	protein-coding
unique_peak2-33488-4-7--1.02346051385325-1.09384600808989	chr11	70220120	70220583	+	0	NA	intron (NM_029231, intron 1 of 16)	intron (NM_029231, intron 1 of 16)	3182	NM_029231	75273	Mm.340601	NM_029231	ENSMUSG00000018921	Pelp1	4930563C04Rik|MNAR	proline, glutamic acid and leucine rich protein 1	protein-coding
common_peak1-17315-26-25-0.22745937401737-0.399869693390336	chr6	142756677	142757553	+	0	NA	Intergenic	Intergenic	-4129	NM_001145390	330440	Mm.484618	NM_001033417		Gm766	-	predicted gene 766	protein-coding
unique_peak2-36358-3-7--1.41398308995928-1.23214870625617	chr2	102451898	102452250	+	0	NA	intron (NM_173749, intron 5 of 10)	intron (NM_173749, intron 5 of 10)	-46766	NM_001077514	20511	Mm.267547	NM_011393	ENSMUSG00000005089	Slc1a2	1700091C19Rik|2900019G14Rik|AI159670|Eaat2|GLT-1|GLT1|MGLT1	solute carrier family 1 (glial high affinity glutamate transporter), member 2	protein-coding
common_peak2-31433-11-6-0.701338662194009-1.32595962126035	chr8	95332391	95332709	+	0	NA	Intergenic	Intergenic	-18677	NM_008610	17390	Mm.29564	NM_008610	ENSMUSG00000031740	Mmp2	Clg4a|GelA|MMP-2	matrix metallopeptidase 2	protein-coding
unique_peak1-5452-13-8-0.608547029195456-0.660903317613904	chr5	121220151	121220849	+	0	NA	intron (NM_145226, intron 4 of 15)	ORR1D1|LTR|MaLR	7168	NM_145226	246727	Mm.204887	NM_145226	ENSMUSG00000032661	Oas3	Oasl10	2'-5' oligoadenylate synthetase 3	protein-coding
unique_peak1-3700-19-3-2.40268732666169-3.59864904409227	chr19	43915900	43916669	+	0	NA	TTS (NR_033472)	TTS (NR_033472)	2991	NR_033472	100038628	Mm.212585	NR_033472	ENSMUSG00000074828	Gm10768	ENSMUSG00000074828	predicted gene 10768	ncRNA
common_peak1-12348-24-52--0.934710551795482-1.8888294360187	chr17	56218181	56219069	+	0	NA	promoter-TSS (NM_008233)	promoter-TSS (NM_008233)	-455	NM_008233	15193	Mm.279188	NM_008233	ENSMUSG00000002833	Hdgfrp2	HRP-2	hepatoma-derived growth factor, related protein 2	protein-coding
common_peak2-19643-6-5--0.0195643903408542-0.947717972411649	chr1	43142115	43142484	+	0	NA	intron (NM_001013025, intron 2 of 12)	B4|SINE|B4	13168	NM_001013025	73122	Mm.246069	NM_001013025	ENSMUSG00000070939	Tgfbrap1	3110018K12Rik|AU024090|AU042859|AW742551|Trap1	transforming growth factor, beta receptor associated protein 1	protein-coding
common_peak1-16465-8-3-1.00522241794757-1.39487600375387	chr5	136961768	136962295	+	0	NA	intron (NM_001291238, intron 1 of 22)	intron (NM_001291238, intron 1 of 22)	79820	NM_001291239	13047	Mm.320317	NM_009986	ENSMUSG00000029705	Cux1	CDP|Cutl1|Cux|Cux-1	cut-like homeobox 1	protein-coding
common_peak1-15178-76-104-0.0476988681971591-0.326519102241958	chr3	152395240	152397196	+	0	NA	intron (NM_025662, intron 3 of 10)	intron (NM_025662, intron 3 of 10)	19154	NM_025662	329777	Mm.331447	NM_025662	ENSMUSG00000039047	Pigk	3000001O05Rik	phosphatidylinositol glycan anchor biosynthesis, class K	protein-coding
common_peak2-30480-12-21--0.810655633549659-0.713635438203849	chr7	49778257	49778946	+	0	NA	Intergenic	RLTR6-int|LTR|ERV1	-75151	NM_027702	71162	Mm.158598	NM_027702	ENSMUSG00000030463	4933421I07Rik	-	RIKEN cDNA 4933421I07 gene	protein-coding
unique_peak1-3178-20-1-3.48807478459119-5.43827864561946	chr18	43128478	43129331	+	0	NA	intron (NM_028392, intron 1 of 8)	MTEa-int|LTR|MaLR	-69744	NR_073583	72930	Mm.26134	NM_027531	ENSMUSG00000024500	Ppp2r2b	2900026H06Rik|6330404L05Rik|E130009M08Rik|PP2A-PR55B|PR55-BETA|SCA12	protein phosphatase 2, regulatory subunit B, beta	protein-coding
common_peak1-15403-13-7-0.778472030637769-0.817533494790411	chr4	83342215	83342785	+	0	NA	intron (NM_001081012, intron 21 of 25)	intron (NM_001081012, intron 21 of 25)	171051	NM_001081012	320226	Mm.180032	NM_029117	ENSMUSG00000052407	Ccdc171	4930418J05Rik|4930473A06Rik|A330015D16Rik	coiled-coil domain containing 171	protein-coding
common_peak2-31214-59-108--0.442820323904348-1.20995807086665	chr8	66860136	66861355	+	0	NA	Intergenic	Intergenic	132493	NR_030491	735270		NR_030491	miRBase:MI0004694	Mir710	Mirn710|mmu-mir-710	microRNA 710	ncRNA
common_peak2-21672-13-11-0.193509529916613-0.379391706698377	chr11	103346557	103347010	+	0	NA	Intergenic	Intergenic	-72805	NM_183034	353047	Mm.383308	NM_183034	ENSMUSG00000034247	Plekhm1	AP162|B2|BC038943|D330036J23Rik	pleckstrin homology domain containing, family M (with RUN domain) member 1	protein-coding
common_peak1-8010-24-16-0.705747061517378-1.02077663956384	chr1	166409298	166410313	+	0	NA	Intergenic	Intergenic	-21319	NM_009721	11931	Mm.4550	NM_009721	ENSMUSG00000026576	Atp1b1	Atp4b|Atpb|Atpb-1|NKbeta1	ATPase, Na+/K+ transporting, beta 1 polypeptide	protein-coding
common_peak1-18093-27-24-0.347689761120511-0.550049347815233	chr8	107544551	107545554	+	0	NA	TTS (NM_001272045)	TTS (NM_001272045)	20299	NM_001272045	436059	Mm.491825	NM_001272045	ENSMUSG00000091813	Ces2h	Ces2|EG436059|Gm5744	carboxylesterase 2H	protein-coding
unique_peak2-32712-4-9--1.34538860874061-1.36011389749466	chr1	153899329	153899745	+	0	NA	intron (NM_197990, intron 1 of 5)	(TG)n|Simple_repeat|Simple_repeat	37913	NM_197990	69399	Mm.278031	NM_197990	ENSMUSG00000032666	1700025G04Rik	2610510E02Rik|2900042O04Rik|ENSMUSG00000073540	RIKEN cDNA 1700025G04 gene	protein-coding
common_peak1-19342-10-15--0.643584654991231-0.519648556297791	chrX	7721480	7722100	+	0	NA	promoter-TSS (NR_033561)	promoter-TSS (NR_033561)	-763	NR_033561	70226	Mm.391639	NR_033561	ENSMUSG00000055188	Rbm3os	2900002K06Rik	RNA binding motif protein 3, opposite strand	ncRNA
common_peak1-17360-12-13--0.158578936969966-0.301029995663979	chr7	29458147	29458732	+	0	NA	Intergenic	Intergenic	-19429	NM_207238	233040	Mm.116116	NM_207238	ENSMUSG00000037463	Fbxo27	E130008B10Rik|FBG5|Gm161	F-box protein 27	protein-coding
common_peak1-8285-59-122--0.617150504466662-2.21121079324483	chr10	28074125	28076020	+	0	NA	intron (NM_008983, intron 6 of 31)	intron (NM_008983, intron 6 of 31)	280446	NM_008983	19272	Mm.332303	NM_008983	ENSMUSG00000019889	Ptprk	AI853699|PTPk|RPTPkappa	protein tyrosine phosphatase, receptor type, K	protein-coding
unique_peak2-34905-0-4--3.16205902536157-1.10720996964787	chr15	83150690	83151013	+	0	NA	intron (NM_025445, intron 9 of 15)	URR1B|DNA|MER1_type	29826	NM_025445	66251	Mm.258910	NM_025445	ENSMUSG00000054277	Arfgap3	0610009H19Rik|1810004P07Rik|1810035F16Rik|9130416J18Rik|Arfgap1	ADP-ribosylation factor GTPase activating protein 3	protein-coding
unique_peak2-35899-8-8--0.164702583494742-1.00793137938329	chr19	4037711	4038141	+	0	NA	promoter-TSS (NM_013541)	promoter-TSS (NM_013541)	-14	NM_013541	14870	Mm.299292	NM_013541	ENSMUSG00000060803	Gstp1	GstpiB	glutathione S-transferase, pi 1	protein-coding
common_peak1-16051-16-10-0.658832023630764-0.699649909729472	chr5	41904828	41905690	+	0	NA	Intergenic	L1_Mus2|LINE|L1	194135	NM_027295	100972	Mm.41555	NM_027295	ENSMUSG00000029128	Rab28	2700023P08Rik|AW496496	RAB28, member RAS oncogene family	protein-coding
common_peak1-18647-16-15-0.118263642268062-0.328191099940264	chr8	111630033	111630708	+	0	NA	Intergenic	Intergenic	169610	NR_037295	100526511		NR_037295		Mir3108	mmu-mir-3108	microRNA 3108	ncRNA
common_peak2-20287-8-7-0.00522241794757061-1.00793137938329	chr1	192092122	192092564	+	0	NA	Intergenic	Intergenic	-97784	NM_008937	19130	Mm.132579	NM_008937	ENSMUSG00000010175	Prox1	A230003G05Rik	prospero homeobox 1	protein-coding
unique_peak2-33049-7-9--0.522837264589173-1.05908390183068	chr10	75548922	75549411	+	0	NA	intron (NM_023219, intron 7 of 14)	Lx7|LINE|L1	24597	NM_023219	64454	Mm.155678	NM_023219		Slc5a4b	2010104G07Rik|SAAT1|SGLT3-b|SGLT3b|pSGLT2	solute carrier family 5 (neutral amino acid transporters, system A), member 4b	protein-coding
unique_peak1-1101-13-6-0.971117108580164-1.01572999746118	chr11	89124227	89124845	+	0	NA	Intergenic	Intergenic	39337	NM_008711	18121	Mm.135266	NM_008711	ENSMUSG00000048616	Nog	-	noggin	protein-coding
common_peak2-31600-30-47--0.415287091229283-0.618527319161325	chr8	121897630	121899355	+	0	NA	Intergenic	MuRRS4-int|LTR|ERV1	-20300	NM_019966	56690	Mm.423037	NM_019966	ENSMUSG00000074064	Mlycd	AI324784|Mcd	malonyl-CoA decarboxylase	protein-coding
unique_peak2-33566-10-11--0.228547155712387-0.31137425193576	chr11	84179037	84179669	+	0	NA	intron (NM_133360, intron 45 of 53)	intron (NM_133360, intron 45 of 53)	147650	NM_019816	56321	Mm.257482	NM_019816	ENSMUSG00000018697	Aatf	4933415H02Rik|5830465M17Rik|Che-1|Trb	apoptosis antagonizing transcription factor	protein-coding
common_peak1-15770-49-85--0.419980931676914-0.945872376852013	chr4	152185603	152186988	+	0	NA	Intergenic	Intergenic	114646	NR_033138	330004	Mm.291863	NM_001033414		Gm833	-	predicted gene 833	ncRNA
unique_peak1-4205-9-3-1.18961340640422-1.57096726280955	chr2	118677189	118677703	+	0	NA	Intergenic	Intergenic	-10290	NM_019826	56357	Mm.6635	NM_019826	ENSMUSG00000027332	Ivd	1300016K07Rik|6720455E18Rik|AI463340	isovaleryl coenzyme A dehydrogenase	protein-coding
common_peak2-23405-7-4-0.477162735410827-1.09384600808989	chr15	59408623	59408945	+	0	NA	intron (NM_026746, intron 4 of 6)	L1_Mus2|LINE|L1	-71425	NM_144549	211770	Mm.40298	NM_144549	ENSMUSG00000032501	Trib1	A530090O15Rik|TRB-1|Trb1	tribbles homolog 1 (Drosophila)	protein-coding
common_peak1-9004-35-30-0.477173948075629-0.806432121853427	chr11	60221928	60223186	+	0	NA	intron (NM_145427, intron 3 of 7)	L2|LINE|L2	8044	NM_145427	246782	Mm.41651	NM_145427	ENSMUSG00000042709	Atpaf2	ATP12|ATP12p	ATP synthase mitochondrial F1 complex assembly factor 2	protein-coding
unique_peak2-34203-3-6--1.22133801201688-1.08602067057793	chr13	41331783	41332101	+	0	NA	Intergenic	Intergenic	-13271	NM_001135577	108934	Mm.38578	NM_001135577	ENSMUSG00000091264	Smim13	2900036K02Rik	small integral membrane protein 13	protein-coding
unique_peak1-6382-13-7-0.778472030637769-0.817533494790411	chr7	73535360	73536201	+	0	NA	TTS (NM_053080)	TTS (NM_053080)	-2553	NM_146191	233328	Mm.33284	NM_146191	ENSMUSG00000015133	Lrrk1	AW319595|C230002E15Rik|D130026O16Rik|mKIAA1790	leucine-rich repeat kinase 1	protein-coding
common_peak2-20837-10-6-0.549060422951165-1.21398586181642	chr11	20332217	20332622	+	0	NA	Intergenic	Intergenic	-99703	NM_018861	55963	Mm.6379	NM_018861	ENSMUSG00000020142	Slc1a4	ASCT-1|ASCT1|AW045657|SATT	solute carrier family 1 (glutamate/neutral amino acid transporter), member 4	protein-coding
common_peak2-23414-53-37-0.893045498972343-2.66531048431652	chr15	59680268	59681072	+	0	NA	Intergenic	Intergenic	-54156	NR_045076	100503021	Mm.402924	NR_045076		Gm19510	-	predicted gene, 19510	ncRNA
common_peak2-31449-7-9--0.522837264589173-1.05908390183068	chr8	104641380	104641787	+	0	NA	Intergenic	L1M1|LINE|L1	667428	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
common_peak1-11206-48-52-0.243006696671616-0.529856340941682	chr15	78406104	78407314	+	0	NA	Intergenic	Intergenic	-3496	NM_009008	19354	Mm.1972	NM_009008	ENSMUSG00000033220	Rac2	AI323801|AI452260	RAS-related C3 botulinum substrate 2	protein-coding
common_peak1-14903-9-12--0.510826311736872-0.394412252720706	chr3	96593807	96594412	+	0	NA	3' UTR (NM_026406, exon 9 of 9)	3' UTR (NM_026406, exon 9 of 9)	24335	NM_018767	54215	Mm.34693	NM_018767	ENSMUSG00000038304	Cd160	AU045688|By55	CD160 antigen	protein-coding
common_peak1-16036-61-110--0.411666536600766-1.12393555493089	chr5	36695195	36696736	+	0	NA	intron (NM_030889, intron 1 of 26)	intron (NM_030889, intron 1 of 26)	44823	NM_030889	81840	Mm.34113	NM_030889	ENSMUSG00000029093	Sorcs2	N28137|mKIAA1329	sortilin-related VPS10 domain containing receptor 2	protein-coding
unique_peak2-33535-2-4--1.23938235115068-0.931118710592187	chr11	77798739	77799133	+	0	NA	intron (NM_174852, intron 2 of 14)	intron (NM_174852, intron 2 of 14)	2618	NM_174852	268448	Mm.274329	NM_174852	ENSMUSG00000037791	Phf12	2410142K10Rik|F630045O13|PF1|mKIAA1523	PHD finger protein 12	protein-coding
common_peak2-25351-15-29--0.894725845052863-1.1282783422172	chr18	80170086	80170858	+	0	NA	Intergenic	Intergenic	-73162	NM_053117	93737	Mm.24678	NM_053117	ENSMUSG00000056214	Pard6g	2410049N21Rik|Par6a	par-6 family cell polarity regulator gamma	protein-coding
unique_peak2-37147-3-9--1.73591118484664-1.57096726280955	chr4	32793279	32793821	+	0	NA	intron (NM_001081392, intron 33 of 101)	MTD|LTR|MaLR	49456	NM_001081392	100019	Mm.24627	NM_133874	ENSMUSG00000058006	Mdn1	4833432B22Rik|A130070M06|AA958993|D4Abb1e|Gm135	midasin homolog (yeast)	protein-coding
common_peak1-7562-29-43--0.347141538022187-0.479515789778906	chr1	43091984	43093198	+	0	NA	TTS (NM_053107)	TTS (NM_053107)	62876	NM_001013025	73122	Mm.246069	NM_001013025	ENSMUSG00000070939	Tgfbrap1	3110018K12Rik|AU024090|AU042859|AW742551|Trap1	transforming growth factor, beta receptor associated protein 1	protein-coding
common_peak1-17273-103-56-1.4551077316953-10.962153415176	chr6	135038825	135041426	+	0	NA	Intergenic	Intergenic	24445	NM_181444	232431	Mm.23575	NM_181444	ENSMUSG00000046733	Gprc5a	Rai3|Raig1	G protein-coupled receptor, family C, group 5, member A	protein-coding
unique_peak1-2178-10-0-3.35641534500877-3.31132995230379	chr15	62109959	62110442	+	0	NA	Intergenic	MTC-int|LTR|MaLR	-59194	NR_003523	67552	Mm.484027	NM_026230		H2afy3	4933432H23Rik	H2A histone family, member Y3	pseudo
common_peak1-16607-29-41--0.28002734216365-0.403996330555226	chr5	150673806	150674780	+	0	NA	Intergenic	RLTR11A|LTR|ERVK	23971	NR_045758	70969	Mm.78499	NR_045758		4930500F04Rik	4931407C17Rik	RIKEN cDNA 4930500F04 gene	ncRNA
common_peak2-27147-12-11-0.0638134843664826-0.337263207250336	chr3	28781273	28781829	+	0	NA	Intergenic	IAPLTR3-int|LTR|ERVK	-9988	NM_001033479	385263	Mm.60893	NM_001033479	ENSMUSG00000074655	Gm1527	Gm1136	predicted gene 1527	protein-coding
common_peak2-25162-29-38--0.173112138247138-0.327809114039775	chr18	53176305	53177230	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-159252	NM_026386	67804	Mm.252171	NM_026386	ENSMUSG00000034484	Snx2	0610030A03Rik	sorting nexin 2	protein-coding
unique_peak2-38065-4-9--1.34538860874061-1.36011389749466	chr6	47812610	47813074	+	0	NA	intron (NM_173034, intron 3 of 4)	intron (NM_173034, intron 3 of 4)	-14712	NM_146175	101095	Mm.440186	NM_146175	ENSMUSG00000025821	Zfp282	AI449432|C81429|E430019K09Rik|HUB1	zinc finger protein 282	protein-coding
common_peak2-25568-13-11-0.193509529916613-0.379391706698377	chr19	6877198	6877780	+	0	NA	Intergenic	Intergenic	26945	NR_039555	100628576		NR_039555		Mir5046	mmu-mir-5046|mu-mir-5046	microRNA 5046	ncRNA
common_peak2-25667-53-49-0.497116822641204-1.18183063007829	chr19	10604976	10606260	+	0	NA	intron (NM_172302, intron 2 of 9)	intron (NM_172302, intron 2 of 9)	5884	NM_172302	269061	Mm.490260	NM_172302	ENSMUSG00000034820	Cpsf7	5730453I16Rik|AL022757|C330017N18Rik	cleavage and polyadenylation specific factor 7	protein-coding
common_peak1-17672-15-8-0.842239749113344-0.891319708951327	chr7	65483406	65484125	+	0	NA	Intergenic	Lx9|LINE|L1	-429807	NM_009728	11982	Mm.135129	NM_009728	ENSMUSG00000025324	Atp10a	Atp10c|pfatp	ATPase, class V, type 10A	protein-coding
unique_peak1-5758-9-2-1.60465090568306-1.87199725847353	chr6	50803032	50803557	+	0	NA	Intergenic	L1M5|LINE|L1	77180	NR_045984	319981	Mm.131454	NR_045984		C530044C16Rik	-	RIKEN cDNA C530044C16 gene	ncRNA
common_peak1-15759-11-18--0.739233929191972-0.671582559449692	chr4	150724970	150725714	+	0	NA	intron (NM_001081557, intron 5 of 23)	intron (NM_001081557, intron 5 of 23)	-293280	NM_009498	22319	Mm.273930	NM_009498	ENSMUSG00000028955	Vamp3	D130027G05Rik|VAMP-3|ceb	vesicle-associated membrane protein 3	protein-coding
common_peak1-11103-32-38--0.00631019964258872-0.303850168981672	chr15	61608208	61609529	+	0	NA	Intergenic	MIRc|SINE|MIR	-2862	NR_040350	432956	Mm.404918	NR_040350		D030024E09Rik	-	RIKEN cDNA D030024E09 gene	ncRNA
common_peak2-23423-28-26-0.298071617657994-0.481798116163919	chr15	61535571	61536826	+	0	NA	intron (NR_040350, intron 4 of 4)	intron (NR_040350, intron 4 of 4)	69808	NR_040350	432956	Mm.404918	NR_040350		D030024E09Rik	-	RIKEN cDNA D030024E09 gene	ncRNA
common_peak1-9804-8-11--0.579740082773585-1.14218153353838	chr12	69363980	69364481	+	0	NA	Intergenic	Intergenic	-593972	NR_033146	100316870	Mm.379794	NR_033146		Gm17821	-	DDB1 and CUL4 associated factor 5 pseudogene	pseudo
unique_peak2-37561-5-6--0.511735258063458-0.947717972411649	chr5	32192550	32192938	+	0	NA	intron (NM_181281, intron 5 of 10)	MIRb|SINE|MIR	192321	NM_181282	107976	Mm.482126	NM_144541	ENSMUSG00000052139	Bre	6030405P19Rik|AI429776|B830038C02Rik	brain and reproductive organ-expressed protein	protein-coding
unique_peak1-1188-13-8-0.608547029195456-0.660903317613904	chr11	101259940	101260537	+	0	NA	Intergenic	MTC|LTR|MaLR	18509	NM_144829	69684	Mm.146283	NM_144829	ENSMUSG00000075528	Aarsd1	1110069E20Rik|2310044P18Rik|AA589600|AlaX|AlaXp-II	alanyl-tRNA synthetase domain containing 1	protein-coding
common_peak1-12558-28-9-1.7310310249341-3.46696221776358	chr18	9271102	9272157	+	0	NA	Intergenic	Intergenic	11178	NM_153086	225152	Mm.119273	NM_153086	ENSMUSG00000036855	Gjd4	9430022F06Rik|Cx39	gap junction protein, delta 4	protein-coding
common_peak2-25012-11-9-0.186765489364251-0.344532117358383	chr18	20558051	20558482	+	0	NA	intron (NM_181682, intron 11 of 14)	intron (NM_181682, intron 11 of 14)	22930	NM_181682	225256	Mm.269128	NM_181682	ENSMUSG00000061928	Dsg1b	Dsg5	desmoglein 1 beta	protein-coding
unique_peak1-1250-8-2-1.42025991722641-1.65811743852845	chr11	115639163	115639810	+	0	NA	intron (NM_028014, intron 2 of 31)	intron (NM_028014, intron 2 of 31)	12739	NM_028014	71947	Mm.23168	NM_028014	ENSMUSG00000020747	2310067B10Rik	Kiaa0195|mKIAA0195	RIKEN cDNA 2310067B10 gene	protein-coding
common_peak2-20107-12-8-0.478850983645327-0.562038191119709	chr1	160521132	160521589	+	0	NA	intron (NM_001205204, intron 11 of 22)	L1_Mur2|LINE|L1	85604	NR_030441	735253		NR_030441		Mir488	Mirn488|mmu-mir-488	microRNA 488	ncRNA
unique_peak2-37768-2-7--1.91745425626332-1.45399745587252	chr5	115341436	115341793	+	0	NA	Intergenic	Intergenic	-5329	NM_011854	23962	Mm.228363	NM_011854	ENSMUSG00000029561	Oasl2	M1204|Mmu-OASL|Oasl	2'-5' oligoadenylate synthetase-like 2	protein-coding
common_peak1-16571-59-32-1.28096988151412-4.91596923656203	chr5	146691900	146694051	+	0	NA	Intergenic	Intergenic	-1545	NM_007818	13112	Mm.332844	NM_007818	ENSMUSG00000056035	Cyp3a11	AI256190|Cyp3a|IIIAm1|Pcn	cytochrome P450, family 3, subfamily a, polypeptide 11	protein-coding
common_peak2-31859-26-31--0.0721009078415378-0.304589945962371	chr9	50767919	50768941	+	0	NA	intron (NM_178710, intron 3 of 15)	intron (NM_178710, intron 3 of 15)	48748	NM_178710	235344	Mm.104932	NM_178710	ENSMUSG00000037112	Sik2	G630080D20Rik|Snf1lk2	salt inducible kinase 2	protein-coding
unique_peak1-835-11-8-0.338768582809301-1.14218153353838	chr11	8686170	8686715	+	0	NA	Intergenic	Lx9|LINE|L1	-121904	NM_001083587	319939	Mm.337820	NM_001083587	ENSMUSG00000020422	Tns3	BC023928|F830010I22Rik|TEM6|Tens1	tensin 3	protein-coding
unique_peak2-35226-7-11--0.785871670422967-1.21681515183528	chr16	92301245	92301819	+	0	NA	promoter-TSS (NM_138743)	promoter-TSS (NM_138743)	-16	NM_138743	68936	Mm.21698	NM_138743	ENSMUSG00000051989	Smim11	1190017O12Rik|C21orf51|Fam165b	small integral membrane protein 11	protein-coding
common_peak1-11145-36-21-1.01988946753046-2.24027827302618	chr15	73434286	73435664	+	0	NA	intron (NM_001033219, intron 2 of 7)	intron (NM_001033219, intron 2 of 7)	-8019	NM_001168255	106068	Mm.212813	NM_001033219	ENSMUSG00000079020	Slc45a4	9330175B01Rik|AW552276	solute carrier family 45, member 4	protein-coding
common_peak2-30930-18-24--0.330937038546373-0.380101753845076	chr7	145044806	145045888	+	0	NA	Intergenic	Intergenic	415990	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
common_peak1-18276-14-29--1.00767443525087-1.28534286439185	chr8	36248269	36249074	+	0	NA	Intergenic	Intergenic	-190124	NM_177741	244416	Mm.247126	NM_177741	ENSMUSG00000046794	Ppp1r3b	6430576E21|AW821953|GL|PTG	protein phosphatase 1, regulatory (inhibitor) subunit 3B	protein-coding
common_peak2-28340-13-15--0.221527969362231-0.308519316180257	chr4	135272009	135272693	+	0	NA	Intergenic	Intergenic	-11723	NM_178257	230828	Mm.261647	NM_178257		Il22ra1	9130219A07Rik|ENSMUSG00000073746|IL-22R|Il22r	interleukin 22 receptor, alpha 1	protein-coding
unique_peak2-37659-5-4--0.0263084308932156-0.909929411522249	chr5	92603174	92603506	+	0	NA	intron (NM_019490, intron 9 of 23)	intron (NM_019490, intron 9 of 23)	36376	NM_019490	56041	Mm.15868	NM_019490	ENSMUSG00000029407	Uso1	115kDa|TAP|Vdp	USO1 vesicle docking factor	protein-coding
unique_peak2-33576-13-24--0.865384159136956-0.879255460030357	chr11	86543988	86544883	+	0	NA	intron (NM_001003908, intron 4 of 31)	intron (NM_001003908, intron 4 of 31)	26559	NM_001003908	67300	Mm.254588	NM_001003908	ENSMUSG00000047126	Cltc	3110065L21Rik|CHC|R74732	clathrin, heavy polypeptide (Hc)	protein-coding
common_peak1-9433-17-16-0.130833496954699-0.356936432242225	chr11	101984048	101984805	+	0	NA	Intergenic	Intergenic	-15336	NM_145435	217212	Mm.46248	NM_145435	ENSMUSG00000017311	Pyy	-	peptide YY	protein-coding
common_peak1-11354-12-17--0.521149016354673-0.417187467413082	chr15	89178464	89179084	+	0	NA	Intergenic	Intergenic	7316	NM_178919	105847	Mm.34511	NM_178919	ENSMUSG00000022614	Lmf2	AI451006|Tmem112b|Tmem153	lipase maturation factor 2	protein-coding
unique_peak2-38599-8-19--1.31670567693979-1.30305656033811	chr7	79273168	79273917	+	0	NA	intron (NM_001024703, intron 17 of 22)	Lx8|LINE|L1	177939	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding
common_peak1-9896-9-13--0.617741515653384-0.459837087125828	chr12	85973337	85973808	+	0	NA	Intergenic	Intergenic	-8397	NM_001168589	432677	Mm.311913	NM_001033776	ENSMUSG00000071235	Vrtn	7420416P09Rik	vertebrae development associated	protein-coding
common_peak1-9613-48-28-1.11294615610724-3.30087239302456	chr11	120761876	120763673	+	0	NA	intron (NM_027745, intron 7 of 18)	PB1D10|SINE|Alu	31412	NM_027745	71276	Mm.275751	NM_027745	ENSMUSG00000048445	Ccdc57	4933434G05Rik	coiled-coil domain containing 57	protein-coding
common_peak2-29971-15-21--0.447266868081641-0.448200956659578	chr6	120037281	120038068	+	0	NA	Intergenic	Intergenic	-5724	NM_016718	29862	Mm.103668	NM_016718	ENSMUSG00000041377	Ninj2	-	ninjurin 2	protein-coding
common_peak1-11572-26-40--0.429652912459622-0.612304185853036	chr16	13671813	13672830	+	0	NA	intron (NM_001177552, intron 1 of 5)	CpG	208	NM_025653	66598	Mm.223689	NM_025653	ENSMUSG00000079737	3110001I22Rik	-	RIKEN cDNA 3110001I22 gene	protein-coding
unique_peak1-5497-11-7-0.508693584251613-1.21681515183528	chr5	135713512	135714132	+	0	NA	exon (NM_011714, exon 15 of 19)	exon (NM_011714, exon 15 of 19)	13095	NM_010246	14371	Mm.6256	NM_010246	ENSMUSG00000049551	Fzd9	mfz9	frizzled homolog 9 (Drosophila)	protein-coding
unique_peak1-4883-9-0-3.18961340640422-3.01029995663981	chr4	37098666	37099089	+	0	NA	Intergenic	Intergenic	-200100	NM_001165999	242384	Mm.132507	NM_175516	ENSMUSG00000045083	Lingo2	B230217C06Rik|Lern3|Lrrn6c	leucine rich repeat and Ig domain containing 2	protein-coding
unique_peak1-5744-8-3-1.00522241794757-1.39487600375387	chr6	48579381	48579904	+	0	NA	non-coding (NR_027236, exon 2 of 4)	non-coding (NR_027236, exon 2 of 4)	1476	NR_027236	243373	Mm.26678	NM_177737	ENSMUSG00000053297	AI854703	AI182503|D630044C04	expressed sequence AI854703	pseudo
unique_peak2-32998-14-24--0.74464002941708-0.756118839439549	chr10	60884731	60885887	+	0	NA	intron (NM_013611, intron 1 of 2)	intron (NM_013611, intron 1 of 2)	4589	NM_013611	18119	Mm.57195	NM_013611	ENSMUSG00000037171	Nodal	Tg.413d	nodal	protein-coding
unique_peak1-6156-9-1-2.18961340640422-2.31132995230379	chr6	137507480	137508002	+	0	NA	intron (NM_001271588, intron 1 of 20)	intron (NM_001271588, intron 1 of 20)	11789	NM_001271595	13860	Mm.235346	NM_007945	ENSMUSG00000015766	Eps8	AW261790	epidermal growth factor receptor pathway substrate 8	protein-coding
common_peak2-23864-47-69--0.194441592178419-0.408000828620178	chr15	102406079	102406995	+	0	NA	intron (NM_146065, intron 2 of 10)	intron (NM_146065, intron 2 of 10)	49315	NM_146065	223922	Mm.208714	NM_146065	ENSMUSG00000099083	Atf7	1110012F10Rik|9430065F09Rik|AI549878|C130020M04Rik	activating transcription factor 7	protein-coding
common_peak2-23754-57-69-0.136750023133962-0.396265517229168	chr15	97837352	97838800	+	0	NA	Intergenic	Lx9|LINE|L1	-2921	NM_001113515	12824	Mm.2423	NM_031163	ENSMUSG00000022483	Col2a1	Col2|Col2a|Col2a-1|Del1|Dmm|Lpk|M100856|Rgsc856	collagen, type II, alpha 1	protein-coding
common_peak1-12128-11-19--0.813234510635749-0.769930178837768	chr17	27027953	27028546	+	0	NA	Intergenic	Intergenic	-25787	NM_053173	16580	Mm.491138	NM_016761	ENSMUSG00000024301	Kifc5b	Hset|KNSL2|Kifc5a	kinesin family member C5B	protein-coding
common_peak2-27655-25-32--0.182544214013348-0.333081040816759	chr3	108209715	108210565	+	0	NA	exon (NM_017392, exon 2 of 34)	exon (NM_017392, exon 2 of 34)	8272	NM_017392	53883	Mm.39728	NM_017392	ENSMUSG00000068740	Celsr2	EGFL2|Flamingo1|flamingo|mKIAA0279|mfmi1	cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog, Drosophila)	protein-coding
common_peak1-9748-109-129-0.363791868858747-1.36328554900616	chr12	51828572	51830146	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-79149	NM_008858	18760	Mm.133719	NM_008858	ENSMUSG00000002688	Prkd1	PKD|PKD1|Pkcm|Prkcm	protein kinase D1	protein-coding
common_peak1-11994-10-21--1.10301627362853-1.16735254179725	chr17	12992631	12993142	+	0	NA	intron (NR_027784, intron 2 of 2)	intron (NR_027784, intron 2 of 2)	-30314	NM_010515	16004	Mm.26553	NM_010515	ENSMUSG00000023830	Igf2r	AI661837|CD222|CI-MPR|M6P/IGF2R|Mpr300	insulin-like growth factor 2 receptor	protein-coding
common_peak1-10551-7-6--0.00826409175941478-0.97990265578305	chr14	20155661	20156020	+	0	NA	Intergenic	Intergenic	265969	NM_001024706	432825	Mm.327147	NM_001024706	ENSMUSG00000095024	Gm5458	EG432825	predicted gene 5458	protein-coding
common_peak1-11692-38-26-0.816565157135062-1.74298885597579	chr16	30587040	30588108	+	0	NA	exon (NM_178069, exon 1 of 14)	exon (NM_178069, exon 1 of 14)	101	NM_178069	224092	Mm.567	NM_178069		Lsg1	5830465I20|AA409273|D16Bwg1547e	large subunit GTPase 1 homolog (S. cerevisiae)	protein-coding
unique_peak2-36414-9-7-0.18961340640422-1.05908390183068	chr2	127649557	127649999	+	0	NA	exon (NM_009772, exon 6 of 25)	exon (NM_009772, exon 6 of 25)	7817	NM_001113179	12235	Mm.2185	NM_009772	ENSMUSG00000027379	Bub1	AL022991|Bub1a|C80208|D2Xrf87	budding uninhibited by benzimidazoles 1 homolog (S. cerevisiae)	protein-coding
common_peak2-29702-26-34--0.201383924786504-0.35535220421655	chr6	83054568	83055458	+	0	NA	intron (NM_001081266, intron 5 of 8)	intron (NM_001081266, intron 5 of 8)	3503	NM_001081266	243510	Mm.436553	NM_001081266	ENSMUSG00000079511	Ccdc142	A230058J24Rik	coiled-coil domain containing 142	protein-coding
common_peak2-30618-12-12--0.0516637330534535-0.309718203022949	chr7	90302142	90302838	+	0	NA	Intergenic	RLTR11A2|LTR|ERVK	-182589	NR_045855	71285	Mm.76818	NR_045855		4933430H16Rik	-	RIKEN cDNA 4933430H16 gene	ncRNA
common_peak1-9735-9-9--0.132314688483142-1.03275496310833	chr12	41084649	41085133	+	0	NA	intron (NM_172575, intron 5 of 12)	intron (NM_172575, intron 5 of 12)	87486	NM_172575	246196	Mm.26852	NM_172575	ENSMUSG00000055917	Zfp277	2410017E24Rik|NIRF4	zinc finger protein 277	protein-coding
unique_peak2-33807-4-4--0.345388608740609-0.864171920961574	chr11	120784687	120785094	+	0	NA	intron (NM_027745, intron 1 of 18)	B3|SINE|B2	9296	NM_027745	71276	Mm.275751	NM_027745	ENSMUSG00000048445	Ccdc57	4933434G05Rik	coiled-coil domain containing 57	protein-coding
common_peak1-10249-67-94--0.0254441255479527-0.302191216390766	chr13	54686591	54688479	+	0	NA	intron (NM_178605, intron 3 of 4)	intron (NM_178605, intron 3 of 4)	3900	NM_178605	28126	Mm.439993	NM_178605	ENSMUSG00000025869	Nop16	AA409471|D13Wsu177e	NOP16 nucleolar protein	protein-coding
common_peak1-19252-8-6-0.197867495889966-1.03789460276074	chr9	110408256	110408830	+	0	NA	intron (NM_001163569, intron 10 of 20)	B1_Mur4|SINE|Alu	-26558	NM_001081340	235626	Mm.288949	NM_001081340	ENSMUSG00000044791	Setd2	4921524K10Rik|BC031601|KMT3A	SET domain containing 2	protein-coding
common_peak2-23048-7-7--0.200909169701811-0.97990265578305	chr14	69912041	69912476	+	0	NA	promoter-TSS (NM_173420)	promoter-TSS (NM_173420)	98	NM_173420	239167	Mm.259889	NM_173420		Synb	D930020E02Rik|syncytin-B	syncytin b	protein-coding
unique_peak1-660-7-2-1.21412832957703-1.45399745587252	chr10	59910154	59910735	+	0	NA	intron (NR_045556, intron 14 of 68)	intron (NR_045556, intron 14 of 68)	47970	NM_001164374	100302688	Mm.444135	NM_001164374	ENSMUSG00000090439	Gm17455	-	predicted gene, 17455	protein-coding
common_peak1-15576-16-14-0.211373046659543-0.364171515310935	chr4	127076774	127077661	+	0	NA	Intergenic	PB1D10|SINE|Alu	-41809	NM_010291	14622	Mm.26859	NM_010291	ENSMUSG00000042357	Gjb5	Cnx31.1|Cx31.1|Gjb-5	gap junction protein, beta 5	protein-coding
common_peak2-21099-18-15-0.312919151228352-0.456667090758524	chr11	51876545	51877211	+	0	NA	intron (NM_001166654, intron 13 of 13)	intron (NM_001166654, intron 13 of 13)	-35448	NM_019411	19052	Mm.260288	NM_019411		Ppp2ca	PP2A|R75353	protein phosphatase 2 (formerly 2A), catalytic subunit, alpha isoform	protein-coding
unique_peak1-3940-9-5-0.604650905683064-1.21398586181642	chr2	28538822	28539341	+	0	NA	intron (NM_001289575, intron 20 of 22)	intron (NM_001289575, intron 20 of 22)	16090	NM_027283	69987	Mm.239376	NM_027283	ENSMUSG00000026809	1700026L06Rik	MAST	RIKEN cDNA 1700026L06 gene	protein-coding
common_peak2-24185-52-54-0.326900276741039-0.699241046598679	chr16	55838333	55839281	+	0	NA	promoter-TSS (NM_030612)	promoter-TSS (NM_030612)	-53	NM_001159395	80859	Mm.247272	NM_030612	ENSMUSG00000035356	Nfkbiz	AA408868|INAP|Mail	nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta	protein-coding
common_peak1-9970-7-5-0.214128329577033-1.01466476204226	chr12	113155356	113155877	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-9350	NM_011625	21981	Mm.313076	NM_011625	ENSMUSG00000021285	Ppp1r13b	AI449786|ASPP1|AW545810|Tp53bp2|Trp53bp2|p85	protein phosphatase 1, regulatory (inhibitor) subunit 13B	protein-coding
unique_peak2-35336-2-5--1.50241675698448-1.08602067057793	chr17	24032708	24033121	+	0	NA	Intergenic	RMER15|LTR|ERVL	-2775	NM_001039238	630537	Mm.436677	NM_001039238	ENSMUSG00000096278	Dcpp2	Dcpp-2|EG630537|SPT-2	demilune cell and parotid protein 2	protein-coding
unique_peak2-32968-9-50--2.48281193556728-7.11821385470722	chr10	50425911	50427101	+	0	NA	intron (NM_198007, intron 16 of 41)	intron (NM_198007, intron 16 of 41)	114031	NM_198007	77987	Mm.222497	NM_198007	ENSMUSG00000038774	Ascc3	ASC1p200|B630009I04Rik|BC023451|D430001L07Rik|D630041L21|Helic1|RNAH	activating signal cointegrator 1 complex subunit 3	protein-coding
unique_peak1-4145-10-0-3.35641534500877-3.31132995230379	chr2	93722779	93723259	+	0	NA	Intergenic	Intergenic	-13705	NM_001033452	381411	Mm.9889	NM_001033452	ENSMUSG00000075023	Accsl	Gm1967	1-aminocyclopropane-1-carboxylate synthase (non-functional)-like	protein-coding
common_peak2-24177-66-93--0.0361051872517963-0.3022037702501	chr16	48993395	48994581	+	0	NA	promoter-TSS (NM_172616)	promoter-TSS (NM_172616)	237	NM_001110017	224170	Mm.275138	NM_027341	ENSMUSG00000064061	Dzip3	2310047C04Rik|2A-HUB|6430549P11Rik|A230104G20	DAZ interacting protein 3, zinc finger	protein-coding
common_peak1-11643-45-17-1.69043302390256-5.44514020616609	chr16	22440018	22441817	+	0	NA	Intergenic	Intergenic	-1274	NM_023794	104156	Mm.155708	NM_023794	ENSMUSG00000013089	Etv5	1110005E01Rik|8430401F14Rik|ERM	ets variant 5	protein-coding
common_peak2-25777-44-62--0.155387088931382-0.346662596190348	chr19	32755618	32756696	+	0	NA	intron (NM_026487, intron 8 of 9)	B1_Mus1|SINE|Alu	30631	NM_026487	67979	Mm.27123	NM_026487	ENSMUSG00000013662	Atad1	4921525H23Rik|AW107648|Thorase	ATPase family, AAA domain containing 1	protein-coding
unique_peak1-5788-9-4-0.867685311516858-1.36011389749466	chr6	57812933	57813456	+	0	NA	Intergenic	Lx3A|LINE|L1	-18743	NM_134183	171201	Mm.377179	NM_134183	ENSMUSG00000058588	Vmn1r21	V1rc28	vomeronasal 1 receptor 21	protein-coding
common_peak1-9245-21-11-0.984526764545079-1.3750876294627	chr11	86590198	86591187	+	0	NA	intron (NM_026191, intron 12 of 17)	intron (NM_026191, intron 12 of 17)	-19698	NM_001003908	67300	Mm.254588	NM_001003908	ENSMUSG00000047126	Cltc	3110065L21Rik|CHC|R74732	clathrin, heavy polypeptide (Hc)	protein-coding
common_peak2-30256-32-35-0.109167017777348-0.348003640999429	chr7	12920902	12922077	+	0	NA	Intergenic	Intergenic	-14012	NM_134209	171243	Mm.377199	NM_134209	ENSMUSG00000066804	Vmn1r83	V1rg8	vomeronasal 1 receptor 83	protein-coding
common_peak1-18100-95-46-1.59332649334638-11.4647986786671	chr8	122584188	122586246	+	0	NA	Intergenic	RLTR10D|LTR|ERVK	40155	NM_133967	102193	Mm.240076	NM_133967	ENSMUSG00000031823	Zdhhc7	AL024087|Gramp2	zinc finger, DHHC domain containing 7	protein-coding
common_peak1-14625-73-66-0.626305815967449-2.07438007356203	chr3	53863168	53864542	+	0	NA	Intergenic	Intergenic	-96124	NM_001253683	22066	Mm.10100	NM_016984	ENSMUSG00000027748	Trpc4	CCE1|STRPC4|Trp4|Trrp4	transient receptor potential cation channel, subfamily C, member 4	protein-coding
unique_peak2-36116-8-17--1.16470258349474-1.02063122982878	chr2	4420969	4421676	+	0	NA	intron (NM_172475, intron 5 of 22)	intron (NM_172475, intron 5 of 22)	-59478	NM_001177844	209630	Mm.37932	NM_172475	ENSMUSG00000026657	Frmd4a	2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|OTTMUSG00000010806|mKIAA1294	FERM domain containing 4A	protein-coding
common_peak1-15161-83-94-0.344367016775179-1.03925822822702	chr3	146811976	146813824	+	0	NA	Intergenic	L1Md_F3|LINE|L1	297569	NM_027594	70892	Mm.187793	NM_027594	ENSMUSG00000036745	Ttll7	1110049N09Rik|4921517B04Rik|C630030B20|Ttll7s	tubulin tyrosine ligase-like family, member 7	protein-coding
common_peak1-10970-8-6-0.197867495889966-1.03789460276074	chr15	27994031	27994610	+	0	NA	Intergenic	Intergenic	-38717	NM_001081302	223435	Mm.485422	NM_001081302	ENSMUSG00000022263	Trio	6720464I07Rik|AA408740|Solo	triple functional domain (PTPRF interacting)	protein-coding
common_peak2-28530-6-4-0.24347001549294-0.989110657569874	chr5	134676358	134676756	+	0	NA	intron (NM_053266, intron 6 of 15)	B1_Mur4|SINE|Alu	16649	NM_053266	114674	Mm.218744	NM_053266	ENSMUSG00000015942	Gtf2ird2	1700012P16Rik	GTF2I repeat domain containing 2	protein-coding
unique_peak1-2777-11-5-0.923731083530457-1.477227296591	chr17	6814243	6814860	+	0	NA	TTS (NR_028305).2	TTS (NR_028305).2	8055	NM_001166630	100040563	Mm.457381	NM_001166630		Dynlt1c	100040603|Dynlt1d	dynein light chain Tctex-type 1C	protein-coding
common_peak1-19009-21-14-0.662598669657717-0.879255460030357	chr9	61370984	61371963	+	0	NA	Intergenic	(TCTA)n|Simple_repeat|Simple_repeat	151300	NM_001083927	21887	Mm.24255	NM_009389	ENSMUSG00000032280	Tle3	2610103N05Rik|ESG|Grg3a|Grg3b|mKIAA1547	transducin-like enhancer of split 3, homolog of Drosophila E(spl)	protein-coding
unique_peak1-5415-11-3-1.50869358425161-1.95434855131066	chr5	109795596	109796142	+	0	NA	Intergenic	Lx4B|LINE|L1	36469	NM_001104627	384220	Mm.469880	NM_001104627	ENSMUSG00000092080	Vmn2r16	EG384220	vomeronasal 2, receptor 16	protein-coding
common_peak2-21197-16-10-0.658832023630764-0.699649909729472	chr11	60698579	60699154	+	0	NA	Intergenic	Intergenic	-6326	NM_001168507	216821	Mm.28063	NM_173453	ENSMUSG00000043284	Tmem11	5730466P16Rik|AA409091	transmembrane protein 11	protein-coding
unique_peak1-3310-8-2-1.42025991722641-1.65811743852845	chr18	78160738	78161178	+	0	NA	intron (NM_001195633, intron 11 of 43)	intron (NM_001195633, intron 11 of 43)	25752	NM_001195633	100502841	Mm.297782	NM_001195633	ENSMUSG00000039840	Epg5	4732475F16|5430411K18Rik|AI661957|AW456499|mKIAA1632	ectopic P-granules autophagy protein 5 homolog (C. elegans)	protein-coding
unique_peak1-2308-8-1-2.00522241794757-2.05605744720049	chr15	81422405	81422846	+	0	NA	intron (NM_177821, intron 1 of 30)	PB1D10|SINE|Alu	5981	NM_177821	328572	Mm.258397	NM_177821	ENSMUSG00000055024	Ep300	A430090G16|A730011L11|KAT3B|p300|p300 HAT	E1A binding protein p300	protein-coding
common_peak1-16517-9-9--0.132314688483142-1.03275496310833	chr5	140608607	140608929	+	0	NA	exon (NM_010752, exon 13 of 18)	exon (NM_010752, exon 13 of 18)	188738	NM_010752	17120	Mm.27250	NM_010752	ENSMUSG00000029554	Mad1l1	AI173502|AW550425|Mad1	MAD1 mitotic arrest deficient 1-like 1	protein-coding
common_peak2-30720-15-27--0.795190171501948-0.918917574080418	chr7	113512883	113513619	+	0	NA	Intergenic	RLTR6-int|LTR|ERV1	-45209	NR_030720	668128	Mm.484022	NR_030720		Gm8989	EG668128|Gm21911	very large inducible GTPase 1 pseudogene	pseudo
common_peak2-29981-12-9-0.326847890200276-0.459837087125828	chr6	120822308	120822707	+	0	NA	intron (NM_153516, intron 5 of 6)	L1Md_F2|LINE|L1	36259	NM_153516	94044	Mm.27990	NM_153516	ENSMUSG00000009112	Bcl2l13	BCL-RAMBO|E430016C20Rik|Mil-1|Mil1	BCL2-like 13 (apoptosis facilitator)	protein-coding
common_peak2-24585-7-8--0.370834171144123-1.00793137938329	chr17	31658914	31659266	+	0	NA	intron (NM_001083891, intron 2 of 2)	intron (NM_001083891, intron 2 of 2)	2030	NM_001083891	78330	Mm.28349	NM_030087	ENSMUSG00000024038	Ndufv3	1500032D16Rik	NADH dehydrogenase (ubiquinone) flavoprotein 3	protein-coding
common_peak1-12810-44-79--0.500035260318827-1.07722485289275	chr18	67244844	67245950	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-2555	NM_177137	14680	Mm.440746	NM_010307	ENSMUSG00000024524	Gnal	2610011C15Rik|9630020G10Rik|Galphaolf|Gna10|Golf	guanine nucleotide binding protein, alpha stimulating, olfactory type	protein-coding
common_peak1-17214-15-8-0.842239749113344-0.891319708951327	chr6	125407298	125408088	+	0	NA	Intergenic	Intergenic	37080	NM_007657	12527	Mm.210676	NM_007657	ENSMUSG00000030342	Cd9	Tspan29	CD9 antigen	protein-coding
common_peak1-16142-11-20--0.883623838527147-0.876666802405043	chr5	73401044	73401538	+	0	NA	intron (NM_173403, intron 2 of 2)	intron (NM_173403, intron 2 of 2)	3148	NM_173403	231290	Mm.491387	NM_173403		Slc10a4	E130304D01	solute carrier family 10 (sodium/bile acid cotransporter family), member 4	protein-coding
common_peak2-25666-13-16--0.30899081061257-0.330004445983672	chr19	10577319	10578002	+	0	NA	intron (NM_025333, intron 3 of 3)	intron (NM_025333, intron 3 of 3)	-20273	NM_133689	67752	Mm.25939	NM_133689	ENSMUSG00000035179	Ppp1r32	4930579J09Rik|AU015816|IIIG9|IIIG9L|IIIG9S	protein phosphatase 1, regulatory subunit 32	protein-coding
common_peak2-31477-15-7-1.01216475055566-1.08658567012551	chr8	106192206	106192741	+	0	NA	intron (NR_045730, intron 4 of 4)	intron (NR_045730, intron 4 of 4)	64774	NR_045730	71058	Mm.67707	NR_045730		4933400L20Rik	-	RIKEN cDNA 4933400L20 gene	ncRNA
common_peak2-20963-23-42--0.704497250193017-1.12624088074372	chr11	20113128	20113995	+	0	NA	intron (NM_008996, intron 1 of 5)	intron (NM_008996, intron 1 of 5)	11956	NM_008996	19324	Mm.271944	NM_008996	ENSMUSG00000020149	Rab1	Gtbp|Rab-1|Rab1A|Ypt1|mKIAA3012	RAB1, member RAS oncogene family	protein-coding
unique_peak2-34580-5-7--0.704380336005853-1.01466476204226	chr14	68051061	68051508	+	0	NA	Intergenic	B3A|SINE|B2	-34705	NR_045961	73977	Mm.414915	NR_045961	ENSMUSG00000093472	4930438E09Rik	-	RIKEN cDNA 4930438E09 gene	ncRNA
common_peak2-30179-42-29-0.835438732258665-1.96184293807029	chr7	99482903	99483680	+	0	NA	intron (NM_001243046, intron 5 of 14)	(GTTTG)n|Simple_repeat|Simple_repeat	99811	NM_001243047	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
unique_peak1-6093-14-2-2.31425365963649-3.28500101358144	chr6	124937052	124937760	+	0	NA	Intergenic	Lx|LINE|L1	-9332	NM_175696	319352	Mm.295327	NM_175696	ENSMUSG00000030329	Pianp	AI255183|AU067746|C530028O21Rik|Panp	PILR alpha associated neural protein	protein-coding
common_peak1-12238-26-38--0.357503126703786-0.505877949819268	chr17	35549287	35550218	+	0	NA	Intergenic	MERVL_2A-int|LTR|ERVL	-12040	NM_023124	15019	Mm.486287	NM_023124		H2-Q8	H-2Q8|MMS10-T|Ms10t|Qa-2|Qa-8|Qa8	histocompatibility 2, Q region locus 8	protein-coding
common_peak1-8983-21-15-0.569489265266236-0.756118839439552	chr11	59449813	59450734	+	0	NA	Intergenic	Intergenic	23805	NM_001011740	257886	Mm.457883	NM_001011740	ENSMUSG00000044061	Olfr225	MOR256-51	olfactory receptor 225	protein-coding
common_peak2-27829-96-200--0.4850004768236-2.2894422539794	chr3	146498897	146500748	+	0	NA	Intergenic	Intergenic	-15509	NM_027594	70892	Mm.187793	NM_027594	ENSMUSG00000036745	Ttll7	1110049N09Rik|4921517B04Rik|C630030B20|Ttll7s	tubulin tyrosine ligase-like family, member 7	protein-coding
common_peak1-8875-33-46--0.223251289152109-0.392002726290462	chr11	43681803	43682828	+	0	NA	intron (NM_001284381, intron 1 of 4)	intron (NM_001284381, intron 1 of 4)	-32324	NM_007416	11548	Mm.39086	NM_007416	ENSMUSG00000050541	Adra1b	[a]1b	adrenergic receptor, alpha 1b	protein-coding
common_peak1-9581-25-22-0.338287949288093-0.51032171069054	chr11	118414990	118416346	+	0	NA	intron (NM_001285436, intron 3 of 13)	intron (NM_001285436, intron 3 of 13)	77394	NM_172573	217364	Mm.473963	NM_172573	ENSMUSG00000033857	Engase	C130099A03|D230014K01Rik	endo-beta-N-acetylglucosaminidase	protein-coding
unique_peak2-39113-7-5-0.214128329577033-1.01466476204226	chr8	80880728	80881142	+	0	NA	intron (NM_183096, intron 12 of 13)	B3|SINE|B2	79616	NM_138944	18997	Mm.234261	NM_138944	ENSMUSG00000031688	Pou4f2	Brn-3.2|Brn-3b|Brn3b|Pou4f-rs1|mBrn3-3R	POU domain, class 4, transcription factor 2	protein-coding
common_peak2-21190-75-61-0.78487068135641-3.07129408524206	chr11	60244385	60245552	+	0	NA	intron (NM_025757, intron 2 of 5)	Charlie22a|DNA|MER1_type	14321	NM_025757	66771	Mm.29950	NM_025757	ENSMUSG00000018415	Gid4	4933439F18Rik	GID complex subunit 4, VID24 homolog (S. cerevisiae)	protein-coding
unique_peak1-7233-16-0-4.11826364226806-5.41853992195166	chr9	75571680	75572391	+	0	NA	Intergenic	L1Md_T|LINE|L1	-40172	NM_009130	20255	Mm.2386	NM_009130	ENSMUSG00000032181	Scg3	1B1075|AI385542|Chgd|SgIII	secretogranin III	protein-coding
unique_peak1-4555-10-5-0.771452844287613-1.33892459842472	chr3	50437698	50438291	+	0	NA	Intergenic	AT_rich|Low_complexity|Low_complexity	-190459	NM_011990	26570	Mm.260988	NM_011990	ENSMUSG00000027737	Slc7a11	9930009M05Rik|AI451155|sut|xCT	solute carrier family 7 (cationic amino acid transporter, y+ system), member 11	protein-coding
common_peak2-20625-16-28--0.73971735285951-0.890873221665474	chr10	80386875	80387684	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-5557	NM_008655	17873	Mm.1360	NM_008655	ENSMUSG00000015312	Gadd45b	AI323528|Myd118	growth arrest and DNA-damage-inducible 45 beta	protein-coding
common_peak2-29437-51-75--0.173003687841012-0.398951012888126	chr6	13838492	13839774	+	0	NA	intron (NR_045995, intron 2 of 2)	L1Md_F2|LINE|L1	17564	NR_045995	76311	Mm.367129	NR_045995	ENSMUSG00000097616	1110019D14Rik	-	RIKEN cDNA 1110019D14 gene	ncRNA
common_peak2-19882-15-28--0.845816244571916-1.02077663956385	chr1	93803935	93804348	+	0	NA	Intergenic	Intergenic	106087	NM_007855	13345	Mm.9474	NM_007855	ENSMUSG00000007805	Twist2	Dermo1|bHLHa39	twist basic helix-loop-helix transcription factor 2	protein-coding
unique_peak1-6771-16-7-1.11826364226806-1.23399803405144	chr8	61559955	61560636	+	0	NA	Intergenic	Lx6|LINE|L1	169743	NM_173411	234290	Mm.39244	NM_173411	ENSMUSG00000049946	BC030500	-	cDNA sequence BC030500	protein-coding
common_peak1-9384-14-19--0.422711934529718-0.403453972741636	chr11	98863685	98864274	+	0	NA	intron (NM_011623, intron 24 of 35)	intron (NM_011623, intron 24 of 35)	-19649	NM_178596	353155	Mm.453253	NM_178596	ENSMUSG00000047197	Gjd3	Gja11|Gjc1|cx30.2	gap junction protein, delta 3	protein-coding
common_peak2-20358-48-105--0.756993303328384-2.60544095518703	chr10	11280400	11282183	+	0	NA	Intergenic	Intergenic	218048	NM_010146	13853	Mm.89946	NM_010146		Epm2a	TG-B|Tg(TcraK,TcrbK)TG-BFlv	epilepsy, progressive myoclonic epilepsy, type 2 gene alpha	protein-coding
unique_peak2-34355-13-22--0.745089925419244-0.690311289528838	chr13	101693937	101694995	+	0	NA	Intergenic	L1Md_A|LINE|L1	-91084	NM_022885	69048	Mm.402215	NM_022885	ENSMUSG00000021629	Slc30a5	1810010K08Rik|AF233321|ZNT5|ZTL1|ZnT-5|Zntl1	solute carrier family 30 (zinc transporter), member 5	protein-coding
unique_peak1-3828-14-2-2.31425365963649-3.28500101358144	chr2	168066940	168067608	+	0	NA	Intergenic	RMER12B|LTR|ERVK	11152	NM_001160330	69372	Mm.482182	NM_001160330	ENSMUSG00000074576	Mocs3	1700020H17Rik|Uba4	molybdenum cofactor synthesis 3	protein-coding
unique_peak1-3477-16-3-2.11826364226806-2.65002542325363	chr19	10273255	10274027	+	0	NA	TTS (NM_001271615)	TTS (NM_001271615)	4792	NM_007999	14156	Mm.2952	NM_007999	ENSMUSG00000024742	Fen1	AW538437|FEN-1	flap structure specific endonuclease 1	protein-coding
unique_peak1-1061-31-4-2.90331057592576-6.95082544816871	chr11	81409465	81410847	+	0	NA	intron (NM_001034013, intron 1 of 9)	(TGAA)n|Simple_repeat|Simple_repeat	-23115	NM_001033765	237880	Mm.435528	NM_001033765		1700071K01Rik	-	RIKEN cDNA 1700071K01 gene	protein-coding
common_peak2-27074-40-43-0.199544064113801-0.449053920623498	chr3	19627883	19628940	+	0	NA	Intergenic	Intergenic	-33015	NM_205769	12918	Mm.290689	NM_205769	ENSMUSG00000049796	Crh	CRF|Gm1347	corticotropin releasing hormone	protein-coding
unique_peak2-39859-8-19--1.31670567693979-1.30305656033811	chrX	73228132	73228773	+	0	NA	Intergenic	RMER19A|LTR|ERVK	-107943	NM_001166453	102866	Mm.28777	NM_145629	ENSMUSG00000016382	Pls3	AI115446|AL024105|T-fimbrin	plastin 3 (T-isoform)	protein-coding
common_peak2-23762-36-42-0.0530563314656565-0.323497957212832	chr15	98092656	98093735	+	0	NA	Intergenic	ORR1A2|LTR|MaLR	-5457	NM_027304	70069	Mm.107718	NM_027304	ENSMUSG00000048077	H1fnt	1700026P10Rik|H1t2|Hanp1|mH1t2	H1 histone family, member N, testis-specific	protein-coding
unique_peak2-39963-7-12--0.901348887842903-1.31827279259406	chrX	142228159	142228662	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-306228	NM_153319	27494	Mm.100068	NM_153319	ENSMUSG00000041688	Amot	CAG-2|D0Kist1|Sii6	angiomotin	protein-coding
unique_peak1-7194-17-2-2.63333383748388-3.75443312462699	chr9	64067639	64068456	+	0	NA	intron (NM_008927, intron 1 of 10)	intron (NM_008927, intron 1 of 10)	-14961	NM_033607	93841	Mm.390180	NM_033607	ENSMUSG00000035337	Uchl4	-	ubiquitin carboxyl-terminal esterase L4	protein-coding
common_peak1-12871-72-61-0.714387502485443-2.56467722642014	chr18	76109145	76111888	+	0	NA	intron (NM_145356, intron 2 of 4)	intron (NM_145356, intron 2 of 4)	130684	NM_145356	207259	Mm.159332	NM_145356	ENSMUSG00000044646	Zbtb7c	B230208J24Rik|Kr-pok|Zbtb36	zinc finger and BTB domain containing 7C	protein-coding
common_peak2-23654-4-5--0.608423014574403-0.909929411522249	chr15	84988160	84988526	+	0	NA	Intergenic	ORR1D2|LTR|MaLR	-1781	NR_040360	100502602	Mm.390830	NR_040360		Gm19277	-	predicted gene, 19277	ncRNA
common_peak1-9360-15-13-0.204809828498052-0.368541233333383	chr11	97629038	97629711	+	0	NA	Intergenic	Intergenic	-1447	NM_026186	67480	Mm.33206	NM_026186	ENSMUSG00000018541	Cwc25	1300013D05Rik|AA473636|Ccdc49|R75228	CWC25 spliceosome-associated protein homolog (S. cerevisiae)	protein-coding
unique_peak2-36162-10-17--0.813509656433543-0.699649909729472	chr2	27318028	27318914	+	0	NA	intron (NM_001113574, intron 3 of 12)	intron (NM_001113574, intron 3 of 12)	-12321	NR_106102	102466836		NR_106102		Mir7578	mmu-mir-7578	microRNA mir-7578	ncRNA
unique_peak2-32805-5-5--0.289342836727009-0.909929411522249	chr1	183679252	183679551	+	0	NA	Intergenic	Intergenic	93131	NM_133815	98386	Mm.4538	NM_133815	ENSMUSG00000004880	Lbr	AI505894|ic	lamin B receptor	protein-coding
unique_peak1-5110-10-3-1.35641534500877-1.75805390616669	chr4	155234615	155235118	+	0	NA	exon (NM_031872, exon 6 of 6)	exon (NM_031872, exon 6 of 6)	2596	NM_031872	83771	Mm.358792	NM_031872	ENSMUSG00000029072	Tas1r3	Sac|T1r3	taste receptor, type 1, member 3	protein-coding
common_peak2-30838-54-61-0.218889451242859-0.498810849059183	chr7	132930879	132932326	+	0	NA	intron (NM_001081022, intron 6 of 27)	(TATG)n|Simple_repeat|Simple_repeat	80212	NM_001081022	233865	Mm.274389	NM_001081022	ENSMUSG00000032743	D430042O09Rik	Kiaa0556	RIKEN cDNA D430042O09 gene	protein-coding
common_peak1-13297-50-56-0.208050302314211-0.479219382460968	chr19	38836205	38837737	+	0	NA	intron (NM_019588, intron 23 of 31)	intron (NM_019588, intron 23 of 31)	56756	NM_021315	57753	Mm.86482	NM_021315	ENSMUSG00000024999	Noc3l	AF233884|Fad24	nucleolar complex associated 3 homolog (S. cerevisiae)	protein-coding
unique_peak2-38318-1-8--2.79698201165906-2.05605744720049	chr6	145998285	145998719	+	0	NA	Intergenic	Intergenic	115835	NM_010656	16651	Mm.49689	NM_010656	ENSMUSG00000030255	Sspn	Krag	sarcospan	protein-coding
unique_peak2-36279-4-6--0.830815435910851-0.989110657569874	chr2	63973786	63974221	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-37908	NM_001267847	60344	Mm.130769	NM_021716	ENSMUSG00000075324	Fign	fi|fidget	fidgetin	protein-coding
common_peak2-31028-23-36--0.48768586111987-0.652802052802678	chr8	13105596	13106450	+	0	NA	promoter-TSS (NM_178708)	promoter-TSS (NM_178708)	302	NM_146207	99375	Mm.212861	NM_146207	ENSMUSG00000031446	Cul4a	2810470J21Rik|AW495282	cullin 4A	protein-coding
common_peak2-22865-96-154--0.110073190918909-0.373911879337573	chr14	27428650	27429873	+	0	NA	intron (NM_145969, intron 11 of 17)	intron (NM_145969, intron 11 of 17)	-28422	NM_007479	11843	Mm.297768	NM_007479	ENSMUSG00000021877	Arf4	AA407803	ADP-ribosylation factor 4	protein-coding
common_peak1-15313-30-34-0.0403923925469067-0.31344009820369	chr4	45342122	45343281	+	0	NA	Intergenic	PB1D10|SINE|Alu	-9226	NM_025513	66362	Mm.275788	NM_025513	ENSMUSG00000028322	Exosc3	2310005D06Rik|AI593501|Rrp40	exosome component 3	protein-coding
unique_peak2-39975-10-29--1.55047525059975-2.39922209159552	chrX	151803304	151804209	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	-30759	NM_016764	53381	Mm.247542	NM_016764	ENSMUSG00000025289	Prdx4	AOE372|Prx-iv|Prx4|TRANK	peroxiredoxin 4	protein-coding
common_peak1-19411-7-7--0.200909169701811-0.97990265578305	chrX	73479346	73479769	+	0	NA	Intergenic	Intergenic	-30088	NM_001013760	238829	Mm.292319	NM_001013760	ENSMUSG00000071738	Gm4937	EG238829	predicted gene 4937	protein-coding
common_peak2-24578-18-22--0.210642804828661-0.321718508207525	chr17	30611940	30612711	+	0	NA	intron (NM_172618, intron 6 of 11)	intron (NM_172618, intron 6 of 11)	-79200	NR_030688	623169	Mm.440508	NR_030688		Gm6402	EG623169	ribosomal protein S17 pseudogene	pseudo
unique_peak2-33866-2-10--2.37688587490062-2.09384600808989	chr12	21227014	21227376	+	0	NA	intron (NM_001098168, intron 12 of 27)	intron (NM_001098168, intron 12 of 27)	64903	NM_008403	16413	Mm.273333	NM_008403	ENSMUSG00000062352	Itgb1bp1	AI449260|AU019480|Icap1	integrin beta 1 binding protein 1	protein-coding
common_peak1-16219-20-18-0.240147271147608-0.388034239052786	chr5	99242552	99243488	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-40438	NM_173404	110075	Mm.209571	NM_173404	ENSMUSG00000029335	Bmp3	9130206H07|9530029I04Rik	bone morphogenetic protein 3	protein-coding
common_peak2-30184-50-45-0.517378360421939-1.16897173470069	chr7	16924137	16924734	+	0	NA	intron (NM_001285891, intron 6 of 9)	intron (NM_001285891, intron 6 of 9)	29503	NM_133234	170770	Mm.7660	NM_133234	ENSMUSG00000002083	Bbc3	PUMA|PUMA/JFY1	BCL2 binding component 3	protein-coding
common_peak1-12997-72-62-0.691303889372401-2.44106047334172	chr19	4396056	4397173	+	0	NA	5' UTR (NM_001001984, exon 1 of 21)	5' UTR (NM_001001984, exon 1 of 21)	463	NM_001001984	225876	Mm.31941	NM_001001984	ENSMUSG00000054611	Kdm2a	100043628|5530401A10Rik|AA589516|AW536790|Cxxc8|Fbl11|Fbl7|Fbxl11|Gm4560|Jhdm1|Jhdm1a|lalina	lysine (K)-specific demethylase 2A	protein-coding
common_peak2-30016-12-20--0.743541437691122-0.625923329873571	chr6	125039690	125040344	+	0	NA	Intergenic	Intergenic	-6164	NM_145979	107932	Mm.333388	NM_145979	ENSMUSG00000063870	Chd4	9530019N15Rik|AA617397|BC005710|D6Ertd380e|Mi-2beta|mKIAA4075	chromodomain helicase DNA binding protein 4	protein-coding
unique_peak2-34918-6-12--1.13504160776079-1.45089835786865	chr15	84654290	84654950	+	0	NA	intron (NM_001081166, intron 2 of 12)	intron (NM_001081166, intron 2 of 12)	31939	NM_001081166	271305	Mm.101022	NM_001081166	ENSMUSG00000016624	Phf21b	A730032D07Rik	PHD finger protein 21B	protein-coding
common_peak1-8377-14-4-1.57728806547028-2.4322161449009	chr10	61383482	61384196	+	0	NA	intron (NM_007731, intron 2 of 40)	intron (NM_007731, intron 2 of 40)	58017	NM_007731	12817	Mm.300931	NM_007731	ENSMUSG00000058806	Col13a1	-	collagen, type XIII, alpha 1	protein-coding
unique_peak2-39747-1-7--2.62705701021674-1.80617997398389	chrUn_GL456367	1607	1835	+	0	NA	NA	NA	NA	NA								
common_peak2-30229-19-17-0.232762325219374-0.392630012299441	chr7	4149172	4149946	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-33258	NM_021454	58804	Mm.34268	NM_021454	ENSMUSG00000063838	Cdc42ep5	1700027J19Rik|2010007O02Rik|Borg3|C85526|CEP5	CDC42 effector protein (Rho GTPase binding) 5	protein-coding
common_peak1-15615-23-14-0.814876908900562-1.09492971584134	chr4	132945887	132946832	+	0	NA	intron (NM_016981, intron 1 of 11)	intron (NM_016981, intron 1 of 11)	20668	NR_039582	100628620		NR_039582	miRBase:MI0018031	Mir5122	mmu-mir-5122|mu-mir-5122	microRNA 5122	ncRNA
common_peak1-10537-84-74-0.706115368393145-2.87976576234654	chr14	16242633	16244917	+	0	NA	intron (NM_146052, intron 1 of 1)	intron (NM_146052, intron 1 of 1)	27726	NM_146052	218763	Mm.138039	NM_146052	ENSMUSG00000045201	Lrrc3b	BC019794|LRP15	leucine rich repeat containing 3B	protein-coding
common_peak1-17648-56-81--0.121956179178841-0.351153259497152	chr7	55841576	55843471	+	0	NA	Intergenic	Intergenic	-29067	NM_175531	243979	Mm.83689	NM_175531	ENSMUSG00000050425	Mrgprb2	4833406I20Rik|Mgrg14	MAS-related GPR, member B2	protein-coding
common_peak2-21226-12-29--1.25811461052088-1.65862513589797	chr11	62820460	62821271	+	0	NA	Intergenic	RMER19A|LTR|ERVK	-54296	NM_027660	71062	Mm.23534	NM_027660	ENSMUSG00000042189	Tekt3	4933407G07Rik	tektin 3	protein-coding
unique_peak1-4441-11-2-1.92373108353046-2.32232533660526	chr2	170319544	170320031	+	0	NA	intron (NM_009996, intron 3 of 11)	intron (NM_009996, intron 3 of 11)	-2141	NM_001013369	109054	Mm.28808	NM_001013369	ENSMUSG00000052033	Pfdn4	0610025M10Rik|1810063B06Rik|C-1|C1|Pfd4	prefoldin 4	protein-coding
unique_peak1-3346-9-3-1.18961340640422-1.57096726280955	chr19	10272288	10272893	+	0	NA	Intergenic	Intergenic	5843	NM_007999	14156	Mm.2952	NM_007999	ENSMUSG00000024742	Fen1	AW538437|FEN-1	flap structure specific endonuclease 1	protein-coding
common_peak1-13683-10-13--0.450939577048835-0.386243247519795	chr2	29628348	29628873	+	0	NA	Intergenic	B3|SINE|B2	11562	NM_001177392	433416	Mm.330112	NM_001034887	ENSMUSG00000075425	Gm13547	OTTMUSG00000012686	predicted gene 13547	protein-coding
unique_peak2-34158-1-6--2.43441193227435-1.56314192529759	chr13	28946599	28947040	+	0	NA	intron (NR_045053, intron 2 of 8)	intron (NR_045053, intron 2 of 8)	30472	NR_045054	72518	Mm.37454	NR_045053		2610307P16Rik	AI666457	RIKEN cDNA 2610307P16 gene	ncRNA
common_peak2-19915-8-6-0.197867495889966-1.03789460276074	chr1	125450481	125450889	+	0	NA	intron (NM_199021, intron 5 of 25)	intron (NM_199021, intron 5 of 25)	491451	NM_199021	269109	Mm.483255	NM_199021	ENSMUSG00000036815	Dpp10	6430601K09Rik|DPP X|Dprp3	dipeptidylpeptidase 10	protein-coding
common_peak1-11152-37-27-0.718638149428215-1.38733277998641	chr15	74920779	74922270	+	0	NA	Intergenic	RMER5|LTR|ERV1	20855	NM_001099217	100041546	Mm.482110	NM_001099217	ENSMUSG00000022584	Ly6c2	Ly-6C.2|Ly-6C2	lymphocyte antigen 6 complex, locus C2	protein-coding
unique_peak2-35608-5-7--0.704380336005853-1.01466476204226	chr17	83312298	83312589	+	0	NA	Intergenic	L1VL4|LINE|L1	165122	NR_045094	100503434	Mm.187281	NR_045094		Gm19689	-	predicted gene, 19689	ncRNA
common_peak2-21079-16-18--0.129663871175524-0.307235046933848	chr11	50225161	50225864	+	0	NA	intron (NM_172557, intron 7 of 17)	B1_Mus2|SINE|Alu	19101	NM_172557	216724	Mm.390400	NM_172557	ENSMUSG00000020375	Rufy1	3000002E04Rik|Rabip4|ZFYVE12	RUN and FYVE domain containing 1	protein-coding
common_peak1-15042-17-30--0.735899972181837-0.841847921495509	chr3	122122127	122123219	+	0	NA	promoter-TSS (NM_013867)	promoter-TSS (NM_013867)	-25	NM_013867	29815	Mm.45815	NM_013867	ENSMUSG00000028121	Bcar3	AI131758|AND-34	breast cancer anti-estrogen resistance 3	protein-coding
common_peak1-10132-15-12-0.311725032414564-0.425539671739611	chr13	33003334	33004137	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-13726	NM_173051	380839	Mm.250802	NM_173051		Serpinb1c	EIC|ovalbumin	serine (or cysteine) peptidase inhibitor, clade B, member 1c	protein-coding
common_peak1-19472-20-40--0.869477220026891-1.45230360914611	chrX	134541220	134542045	+	0	NA	intron (NM_030688, intron 2 of 10)	intron (NM_030688, intron 2 of 10)	202487	NM_026469	67944	Mm.443280	NM_026469	ENSMUSG00000071686	Tex13a	1700025D03Rik	testis expressed 13A	protein-coding
common_peak2-29336-12-6-0.841421063030034-1.58711810488664	chr5	148362148	148362517	+	0	NA	Intergenic	MLT1G3|LTR|MaLR	120176	NM_028291	72587	Mm.320469	NM_028291	ENSMUSG00000029647	Pan3	2700050F09Rik|A430027N15Rik|AU014670	PAN3 polyA specific ribonuclease subunit homolog (S. cerevisiae)	protein-coding
common_peak1-12837-34-46--0.172520324676372-0.340524918943711	chr18	70472215	70473109	+	0	NA	Intergenic	L1Md_T|LINE|L1	-68424	NM_029346	75577	Mm.58214	NM_029346	ENSMUSG00000024512	Dynap	2310002L13Rik	dynactin associated protein	protein-coding
common_peak2-19560-9-10--0.269818212233077-1.05503135781948	chr1	9236307	9236938	+	0	NA	intron (NM_027671, intron 1 of 20)	L1Md_T|LINE|L1	53336	NM_001290390	71096	Mm.336395	NM_027671		Sntg1	4933426D16Rik|G1SYN|SYN4	syntrophin, gamma 1	protein-coding
common_peak1-18559-25-42--0.564414849356992-0.820829064533854	chr8	104533648	104534708	+	0	NA	Intergenic	IAPLTR1_Mm|LTR|ERVK	774833	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
unique_peak2-35135-4-6--0.830815435910851-0.989110657569874	chr16	30599975	30600296	+	0	NA	5' UTR (NM_177632, exon 1 of 1)	5' UTR (NM_177632, exon 1 of 1)	326	NM_177632	224093	Mm.28244	NM_177632	ENSMUSG00000046546	Fam43a	Tuf1	family with sequence similarity 43, member A	protein-coding
unique_peak1-5540-9-3-1.18961340640422-1.57096726280955	chr5	140535673	140536125	+	0	NA	intron (NM_010752, intron 17 of 17)	intron (NM_010752, intron 17 of 17)	152002	NM_175522	243312	Mm.237102	NM_175522	ENSMUSG00000048988	Elfn1	A930017N06Rik|AI197272|Ppp1r28	leucine rich repeat and fibronectin type III, extracellular 1	protein-coding
unique_peak2-34576-6-5--0.0195643903408542-0.947717972411649	chr14	67159635	67159966	+	0	NA	Intergenic	Intergenic	-94288	NM_001271759	11549	Mm.57064	NM_013461	ENSMUSG00000045875	Adra1a	Adra1c	adrenergic receptor, alpha 1a	protein-coding
common_peak2-31839-15-12-0.311725032414564-0.425539671739611	chr9	45420273	45420868	+	0	NA	intron (NM_001081270, intron 3 of 32)	intron (NM_001081270, intron 3 of 32)	-181255	NR_040732	74602	Mm.394117	NR_040732	ENSMUSG00000097074	4833428L15Rik	-	RIKEN cDNA 4833428L15 gene	ncRNA
common_peak1-17827-20-29--0.418815811017326-0.51032171069054	chr7	105810353	105811293	+	0	NA	Intergenic	B1F|SINE|Alu	-5744	NM_172280	233545	Mm.387819	NM_172280	ENSMUSG00000035401	2210018M11Rik	2310016L09Rik|AU019521|AU019557|Emsy	RIKEN cDNA 2210018M11 gene	protein-coding
unique_peak2-39700-6-7--0.434601889619698-0.97990265578305	chr9	111684097	111684632	+	0	NA	Intergenic	Intergenic	-91644	NM_016853	20840	Mm.1414	NM_016853	ENSMUSG00000032502	Stac	-	src homology three (SH3) and cysteine rich domain	protein-coding
common_peak1-13224-20-13-0.680719862533589-0.809260849721102	chr19	24999036	24999862	+	0	NA	intron (NR_033744, intron 11 of 14)	Tigger7|DNA|MER2_type	17332	NR_034047	100217439		NR_034047		Snora19	MBI-51	small nucleolar RNA, H/ACA box 19	snoRNA
unique_peak1-335-11-6-0.701338662194009-1.32595962126035	chr1	133691971	133692591	+	0	NA	Intergenic	Intergenic	-1691	NM_178079	212933	Mm.23844	NM_178079	ENSMUSG00000042251	Pm20d1	4732466D17Rik|AI098026	peptidase M20 domain containing 1	protein-coding
common_peak1-10616-20-20-0.0957573618124323-0.321718508207528	chr14	33350958	33351803	+	0	NA	intron (NM_001081221, intron 5 of 20)	intron (NM_001081221, intron 5 of 20)	24673	NM_001081221	319955	Mm.318310	NM_177043	ENSMUSG00000054051	Ercc6	4732403I04|C130058G22Rik|CSB	excision repair cross-complementing rodent repair deficiency, complementation group 6	protein-coding
common_peak2-24853-12-18--0.599151528355947-0.476916024233333	chr17	75307258	75307945	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-97268	NM_019919	268977	Mm.269747	NM_019919	ENSMUSG00000001870	Ltbp1	9430031G15Rik|9830146M04|Ltbp-1|Tgfb|b2b1000Clo	latent transforming growth factor beta binding protein 1	protein-coding
unique_peak2-36541-2-6--1.72480917832092-1.26211192963361	chr2	165326064	165326366	+	0	NA	Intergenic	MLT1F2|LTR|MaLR	-3182	NM_130451	170441	Mm.34147	NM_130451	ENSMUSG00000027661	Slc2a10	AA450473|Glut10	solute carrier family 2 (facilitated glucose transporter), member 10	protein-coding
common_peak2-23646-18-33--0.774543690021988-1.00055860626307	chr15	84234935	84235935	+	0	NA	intron (NM_001163145, intron 4 of 4)	intron (NM_001163145, intron 4 of 4)	42092	NM_001163145	72301	Mm.275387	NM_001163145	ENSMUSG00000062760	1810041L15Rik	Kiaa1644	RIKEN cDNA 1810041L15 gene	protein-coding
common_peak2-24548-4-6--0.830815435910851-0.989110657569874	chr17	28013723	28014064	+	0	NA	exon (NM_001080769, exon 3 of 21)	exon (NM_001080769, exon 3 of 21)	20441	NM_001080769	224648	Mm.291291	NM_001080769	ENSMUSG00000039512	Uhrf1bp1	1110020K19Rik|AA408674|F830021D11Rik|mKIAA4127	UHRF1 (ICBP90) binding protein 1	protein-coding
common_peak2-29897-14-11-0.314253659636488-0.435191258261915	chr6	113471078	113471838	+	0	NA	intron (NM_175101, intron 3 of 7)	B3|SINE|B2	10174	NM_175101	66087	Mm.275989	NM_175101	ENSMUSG00000030286	Emc3	0610039A15Rik|AI225901|AW260416|Pob|Tmem111	ER membrane protein complex subunit 3	protein-coding
common_peak1-19377-19-31--0.597312673338314-0.721233599456203	chrX	36874327	36875153	+	0	NA	Intergenic	Lx6|LINE|L1	175297	NM_001177380	78631	Mm.243738	NM_001177380	ENSMUSG00000079619	Cypt15	1700085A12Rik	cysteine-rich perinuclear theca 15	protein-coding
common_peak2-31599-5-6--0.511735258063458-0.947717972411649	chr8	121829593	121829935	+	0	NA	intron (NM_019707, intron 11 of 13)	B3|SINE|B2	-38674	NM_024219	68196	Mm.358714	NM_024219	ENSMUSG00000031839	Hsbp1	0610007A03Rik|AA408769|Hsp25	heat shock factor binding protein 1	protein-coding
unique_peak2-36599-3-7--1.41398308995928-1.23214870625617	chr2	177206063	177206400	+	0	NA	Intergenic	MurSatRep1|Unknown|Unknown	-43216	NM_001177568	628308	Mm.460436	NM_001177568		Gm14420	OTTMUSG00000016588	predicted gene 14420	protein-coding
unique_peak2-36175-5-7--0.704380336005853-1.01466476204226	chr2	29346942	29347338	+	0	NA	intron (NM_001290489, intron 3 of 6)	intron (NM_001290489, intron 3 of 6)	-16326	NR_105753	102465170		NR_105753	miRBase:MI0021863	Mir133c	mmu-mir-133c	microRNA mir-133c	ncRNA
common_peak1-17981-13-13--0.0288828914198356-0.309074325783021	chr7	133793712	133794339	+	0	NA	intron (NM_029339, intron 1 of 9)	intron (NM_029339, intron 1 of 9)	1202	NM_029339	75565	Mm.45686	NM_029339	ENSMUSG00000030714	Ccdc101	1700023O11Rik|9530025I05Rik	coiled-coil domain containing 101	protein-coding
common_peak2-21602-21-12-0.869049547125143-1.18646456559501	chr11	99127001	99127536	+	0	NA	Intergenic	Intergenic	19284	NM_029393	75706	Mm.46378	NM_029393	ENSMUSG00000020913	Krt24	2310058N18Rik|2310075C18Rik	keratin 24	protein-coding
common_peak2-23937-53-88--0.334760418550469-0.696474447554397	chr16	13255972	13257227	+	0	NA	promoter-TSS (NM_001122667)	promoter-TSS (NM_001122667)	25	NM_001122667	239719	Mm.270643	NM_153588	ENSMUSG00000009569	Mkl2	ENSMUSG00000075401|Gt4-1|MRTF-B|Mrtfb|mKIAA1243	MKL/myocardin-like 2	protein-coding
common_peak1-7463-18-10-0.853487532591054-1.03889213727317	chr1	136134225	136135174	+	0	NA	Intergenic	Intergenic	-2665	NM_001008533	11539	Mm.298908	NM_009629	ENSMUSG00000042429	Adora1	A1-AR|A1AR|A1R|AA1R|AI848715|BB176431|Ri	adenosine A1 receptor	protein-coding
unique_peak1-3085-21-4-2.24756117037887-3.74275476306371	chr18	23986723	23987553	+	0	NA	intron (NM_153058, intron 1 of 6)	URR1A|DNA|MER1_type	24667	NM_153058	212307	Mm.132237	NM_153058	ENSMUSG00000024277	Mapre2	AI314113|C820009F03Rik|D18Abb1e|EB1|EB2|RP1	microtubule-associated protein, RP/EB family, member 2	protein-coding
common_peak1-18717-77-121--0.146210758006889-0.4148168146536	chr8	123041219	123042435	+	0	NA	intron (NM_198671, intron 1 of 15)	intron (NM_198671, intron 1 of 15)	-17930	NM_001145897	382034	Mm.334856	NM_198671	ENSMUSG00000031822	Gse1	2210013I18Rik|mKIAA0182	genetic suppressor element 1	protein-coding
unique_peak1-3267-10-0-3.35641534500877-3.31132995230379	chr18	69170542	69171070	+	0	NA	Intergenic	Intergenic	11121	NR_105780	102465187		NR_105780	miRBase:MI0021890	Mir145b	mmu-mir-145b	microRNA mir-145b	ncRNA
common_peak2-21822-6-10--0.894033508256995-1.21398586181642	chr11	119933616	119934036	+	0	NA	intron (NM_009734, intron 10 of 25)	intron (NM_009734, intron 10 of 25)	14315	NM_009734	12009	Mm.2556	NM_009734	ENSMUSG00000039781	Cep131	AZ1|Azi|Azi1	centrosomal protein 131	protein-coding
unique_peak2-36849-5-5--0.289342836727009-0.909929411522249	chr3	89279234	89279663	+	0	NA	Intergenic	Intergenic	15955	NM_027348	68603	Mm.34242	NM_026784	ENSMUSG00000027952	Pmvk	1110011E12Rik|2900002L22Rik|AV001327|PMK|PMKA|PMKASE	phosphomevalonate kinase	protein-coding
unique_peak2-32935-0-7--3.84013093047421-1.80617997398389	chr10	34350758	34351240	+	0	NA	Intergenic	Lx|LINE|L1	147793	NM_010237	14302	Mm.332432	NM_010237	ENSMUSG00000019779	Frk	BSK|BSK/IYK|C85044|GTK|RAK	fyn-related kinase	protein-coding
unique_peak1-1118-6-0-2.5653981103803-2.10720996964787	chr11	94430601	94431009	+	0	NA	TTS (NM_007689)	TTS (NM_007689)	4417	NM_007689	12643	Mm.440523	NM_007689	ENSMUSG00000039084	Chad	SLRR4A	chondroadherin	protein-coding
common_peak1-9682-58-67-0.208487093640158-0.515444410977657	chr12	10390427	10391609	+	0	NA	intron (NM_027588, intron 8 of 8)	B4A|SINE|B4	-6568	NM_023697	105014	Mm.119343	NM_023697	ENSMUSG00000020621	Rdh14	3110030G19Rik|AW215439|PAN2	retinol dehydrogenase 14 (all-trans and 9-cis)	protein-coding
common_peak2-26430-68-74-0.341142088802416-0.869135945698768	chr2	64097695	64099041	+	0	NA	Intergenic	Intergenic	-162273	NM_001267847	60344	Mm.130769	NM_021716	ENSMUSG00000075324	Fign	fi|fidget	fidgetin	protein-coding
common_peak2-23167-12-9-0.326847890200276-0.459837087125828	chr14	122912883	122913415	+	0	NA	Intergenic	Intergenic	-20401	NM_144844	110821	Mm.23876	NM_144844	ENSMUSG00000041650	Pcca	C79630	propionyl-Coenzyme A carboxylase, alpha polypeptide	protein-coding
unique_peak2-39194-0-8--4.01005593191652-2.05605744720049	chr8	104378220	104378691	+	0	NA	Intergenic	Intergenic	930556	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
unique_peak1-7282-13-5-1.19350952991661-1.95509489018123	chr9	104062846	104063568	+	0	NA	intron (NM_001163026, intron 53 of 55)	B1_Mus1|SINE|Alu	-34234	NM_145700	252837	Mm.269254	NM_145700	ENSMUSG00000079355	Ackr4	A630091E18Rik|CCBP2|CCR11|CCX-CKR|CCX-CKR1|Ccrl1|Cmkbrl1|PPR1|VSHK1	atypical chemokine receptor 4	protein-coding
common_peak1-12312-13-24--0.865384159136956-0.879255460030357	chr17	47368815	47369466	+	0	NA	intron (NM_172622, intron 1 of 16)	intron (NM_172622, intron 1 of 16)	1961	NM_172622	224829	Mm.260989	NM_172622	ENSMUSG00000064043	Trerf1	9430096I18Rik|AI429294|B830015H24|RAPA|Trep-132|Trep132	transcriptional regulating factor 1	protein-coding
common_peak2-29973-14-12-0.198776442216552-0.373562084705529	chr6	120114158	120114787	+	0	NA	intron (NM_016718, intron 1 of 3)	B2_Mm2|SINE|B2	71074	NM_016718	29862	Mm.103668	NM_016718	ENSMUSG00000041377	Ninj2	-	ninjurin 2	protein-coding
common_peak2-26415-14-7-0.899216160357645-0.947446088118041	chr2	59676731	59677131	+	0	NA	intron (NM_001290659, intron 22 of 25)	intron (NM_001290659, intron 22 of 25)	43732	NM_001159636	72137	Mm.288734	NM_028118	ENSMUSG00000026988	Wdsub1	1700048E19Rik|2610014F08Rik	WD repeat, SAM and U-box domain containing 1	protein-coding
unique_peak1-309-8-2-1.42025991722641-1.65811743852845	chr1	129462691	129463213	+	0	NA	intron (NM_028135, intron 2 of 7)	intron (NM_028135, intron 2 of 7)	111646	NM_028135	72160	Mm.281287	NM_028135	ENSMUSG00000026347	Tmem163	2610024A01Rik|SV31	transmembrane protein 163	protein-coding
unique_peak2-39735-9-21--1.26981821223308-1.37307999835977	chr9	122805213	122806335	+	0	NA	TTS (NM_001177505)	TTS (NM_001177505)	8185	NM_001177505	382118	Mm.483265	NM_001177505	ENSMUSG00000063488	Zkscan7	BC042569|Zfp167	zinc finger with KRAB and SCAN domains 7	protein-coding
common_peak1-18233-15-11-0.4272022498345-0.503257505534083	chr8	26978243	26979053	+	0	NA	intron (NM_008432, intron 7 of 26)	G-rich|Low_complexity|Low_complexity	18553	NM_008432	16532	Mm.289679	NM_008432	ENSMUSG00000031576	Kcnu1	Kcnma3|Slo3|mSlo3	potassium channel, subfamily U, member 1	protein-coding
common_peak2-25056-35-38-0.145968039600255-0.368093376636814	chr18	33794576	33795509	+	0	NA	Intergenic	L1Md_A|LINE|L1	-159504	NR_038152	69749	Mm.248787	NR_038151	ENSMUSG00000087590	2410004N09Rik	-	RIKEN cDNA 2410004N09 gene	ncRNA
unique_peak1-5690-12-4-1.32684789020028-2.04196296489515	chr6	34292849	34293432	+	0	NA	Intergenic	Intergenic	-11024	NM_008012	14187	Mm.5378	NM_008012	ENSMUSG00000029762	Akr1b8	FR-1|Fgfrp|Fgrp	aldo-keto reductase family 1, member B8	protein-coding
common_peak1-15665-22-26--0.107603397076064-0.30528805757448	chr4	136433268	136434181	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	8368	NM_009777	12260	Mm.2570	NM_009777	ENSMUSG00000036905	C1qb	-	complement component 1, q subcomponent, beta polypeptide	protein-coding
common_peak2-20347-95-175--0.311516273613283-1.04835592061447	chr10	7955147	7957129	+	0	NA	intron (NM_177387, intron 7 of 7)	intron (NM_177387, intron 7 of 7)	-280217	NM_138667	68652	Mm.193041	NM_138667	ENSMUSG00000015755	Tab2	1110030N06Rik|A530078N03Rik|Map3k7ip2|mKIAA0733	TGF-beta activated kinase 1/MAP3K7 binding protein 2	protein-coding
unique_peak2-37945-6-5--0.0195643903408542-0.947717972411649	chr5	149434372	149434708	+	0	NA	Intergenic	Intergenic	-70176	NM_011908	24109	Mm.21846	NM_011908	ENSMUSG00000001687	Ubl3	AW108023|HCG	ubiquitin-like 3	protein-coding
common_peak2-23967-12-9-0.326847890200276-0.459837087125828	chr16	17070097	17070642	+	0	NA	5' UTR (NM_001291047, exon 1 of 6)	5' UTR (NM_001291047, exon 1 of 6)	137	NM_001291047	106369	Mm.237941	NM_023249	ENSMUSG00000022773	Ypel1	0610009L05Rik|1700016N17Rik|1700019O22Rik|4921520K19Rik|4930511F14Rik|AV118478|Dgl1|Ppil2|mdgl-1	yippee-like 1 (Drosophila)	protein-coding
common_peak2-31819-16-12-0.417823924126969-0.489164546851866	chr9	41581935	41582561	+	0	NA	Intergenic	Intergenic	192239	NR_029822	387236		NR_029822	miRBase:MI0000725	Mir125b-1	Mirn125b|Mirn125b-1	microRNA 125b-1	ncRNA
unique_peak1-4075-10-2-1.77145284428761-2.09384600808989	chr2	66596928	66597448	+	0	NA	intron (NM_009135, intron 1 of 24)	Lx2B|LINE|L1	25779	NM_009135	20272	Mm.38127	NM_009135	ENSMUSG00000034810	Scn7a	1110034K09Rik|AI642000|NaG|Nav2|Nav2.3|Nax|Scn6a	sodium channel, voltage-gated, type VII, alpha	protein-coding
common_peak1-10671-36-49--0.16453510360697-0.338002390994162	chr14	52103308	52104288	+	0	NA	Intergenic	Intergenic	32161	NM_009486	22301	Mm.482572	NM_009486	ENSMUSG00000070448	Vmn2r89	V2r10|V2r11	vomeronasal 2, receptor 89	protein-coding
common_peak2-19979-16-18--0.129663871175524-0.307235046933848	chr1	133609748	133610323	+	0	NA	TTS (NM_145509)	TTS (NM_145509)	24763	NM_145509	226421	Mm.44508	NM_145509	ENSMUSG00000052688	5430435G22Rik	Rab7b	RIKEN cDNA 5430435G22 gene	protein-coding
unique_peak1-1042-6-1-1.5653981103803-1.56314192529759	chr11	77299157	77299477	+	0	NA	intron (NM_172945, intron 1 of 15)	intron (NM_172945, intron 1 of 15)	3863	NM_172945	268445	Mm.39296	NM_172945	ENSMUSG00000037907	Ankrd13b	AW124583|B930093C12Rik	ankyrin repeat domain 13b	protein-coding
unique_peak1-1693-10-0-3.35641534500877-3.31132995230379	chr13	75825340	75825987	+	0	NA	Intergenic	RLTR15|LTR|ERVK	-19269	NM_138953	192657	Mm.21288	NM_138953	ENSMUSG00000001542	Ell2	-	elongation factor RNA polymerase II 2	protein-coding
common_peak1-16855-48-15-1.97092715123481-7.19781414900792	chr6	54276900	54278637	+	0	NA	intron (NM_030024, intron 1 of 1)	CpG	762	NM_030024	78004	Mm.41984	NM_030024	ENSMUSG00000045725	Prr15	E130201N16Rik|G90	proline rich 15	protein-coding
common_peak2-20805-12-9-0.326847890200276-0.459837087125828	chr10	127188224	127188783	+	0	NA	intron (NM_007412, intron 1 of 1)	intron (NM_007412, intron 1 of 1)	351	NM_007412	11536	Mm.2857	NM_007412		Gpr182	AM-R|Admr|G10-D|Gpcr17|Gpcr22|MB10|NOW	G protein-coupled receptor 182	protein-coding
unique_peak1-6417-8-1-2.00522241794757-2.05605744720049	chr7	84709515	84709985	+	0	NA	Intergenic	Intergenic	1012974	NM_008746	18213	Mm.33496	NM_008746		Ntrk3	AW125844|Ntrk3_tv3|TrkC	neurotrophic tyrosine kinase, receptor, type 3	protein-coding
common_peak1-16224-8-16--1.08224042330277-0.891319708951328	chr5	100039172	100039719	+	0	NA	intron (NR_030692, intron 1 of 3)	intron (NR_030692, intron 1 of 3)	118634	NR_030692	319818	Mm.295233	NR_030692	ENSMUSG00000089809	A930011G23Rik	-	RIKEN cDNA A930011G23 gene	ncRNA
unique_peak1-3266-16-5-1.53330114154691-1.80287260729378	chr18	69167712	69168473	+	0	NA	Intergenic	Intergenic	13835	NR_105780	102465187		NR_105780	miRBase:MI0021890	Mir145b	mmu-mir-145b	microRNA mir-145b	ncRNA
common_peak1-16002-25-18-0.613922391901521-0.86528749982161	chr5	33935501	33936299	+	0	NA	Intergenic	L1M5|LINE|L1	36384	NM_178390	74504	Mm.294695	NM_178390	ENSMUSG00000037339	Fam53a	2410018C17Rik|5430419M09Rik|Dntnp	family with sequence similarity 53, member A	protein-coding
common_peak2-23072-20-14-0.581184188982674-0.690311289528838	chr14	73388845	73389533	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-36221	NR_027860	668489	Mm.158324	NR_027860		Gm9199	EG668489	glycine cleavage system protein H (aminomethyl carrier) pseudogene	pseudo
common_peak2-28202-34-38-0.0966663081390173-0.344477557577616	chr4	117119793	117120588	+	0	NA	intron (NM_025739, intron 2 of 14)	intron (NM_025739, intron 2 of 14)	49330	NM_025739	66743	Mm.318331	NM_025739	ENSMUSG00000028677	Rnf220	4732477A13|4931406I20Rik|5730503K05Rik|AV302541	ring finger protein 220	protein-coding
common_peak2-28056-29-33-0.0248272393647717-0.313805205020552	chr4	59330910	59331833	+	0	NA	intron (NM_001163288, intron 15 of 16)	intron (NM_001163288, intron 15 of 16)	58448	NR_105031	101055769	Mm.421401	NR_105031		LOC101055769	-	uncharacterized LOC101055769	ncRNA
common_peak2-30617-19-14-0.495796731053168-0.607095980551316	chr7	90285112	90285656	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-165483	NR_045855	71285	Mm.76818	NR_045855		4933430H16Rik	-	RIKEN cDNA 4933430H16 gene	ncRNA
unique_peak1-639-19-5-1.81772482594053-2.59995804677862	chr10	42108314	42109078	+	0	NA	intron (NM_145743, intron 7 of 12)	intron (NM_145743, intron 7 of 12)	89675	NM_145743	215951	Mm.89646	NM_145743	ENSMUSG00000038302	Lace1	CG8520	lactation elevated 1	protein-coding
unique_peak2-34026-8-12--0.695217300193522-0.475924844171029	chr12	108835876	108836437	+	0	NA	Intergenic	Intergenic	137542	NR_045973	74968	Mm.359821	NR_045973	ENSMUSG00000085641	4930465M20Rik	4930431H15Rik	RIKEN cDNA 4930465M20 gene	ncRNA
common_peak1-17458-14-26--0.855671341805824-0.949797625454538	chr7	19269681	19270466	+	0	NA	exon (NM_054058, exon 2 of 6)	exon (NM_054058, exon 2 of 6)	1268	NM_054058	434540	Mm.479863	NM_054058		Psg20	Cea7|EG434540	pregnancy-specific glycoprotein 20	protein-coding
common_peak2-30711-54-44-0.681232665300059-1.78324025080683	chr7	113185241	113186842	+	0	NA	Intergenic	L1Md_T|LINE|L1	35337	NR_030720	668128	Mm.484022	NR_030720		Gm8989	EG668128|Gm21911	very large inducible GTPase 1 pseudogene	pseudo
common_peak2-21169-17-25--0.482143379936054-0.479250674391597	chr11	59471825	59472542	+	0	NA	Intergenic	Intergenic	-3814	NM_201245	26936	Mm.2402	NM_012027	ENSMUSG00000005417	Mprip	9530046C02|AA536749|AI647711|C76423|RIP3|Rhoip3|mKIAA0864|p116Rip	myosin phosphatase Rho interacting protein	protein-coding
common_peak2-26888-172-220-0.390720119890462-2.39394714592947	chr2	157422619	157425367	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-31896	NM_016916	53619	Mm.480461	NM_016916	ENSMUSG00000067787	Blcap	AI462828|Bc10	bladder cancer associated protein homolog (human)	protein-coding
common_peak2-27537-19-14-0.495796731053168-0.607095980551316	chr3	96093704	96094506	+	0	NA	intron (NM_010186, intron 3 of 5)	intron (NM_010186, intron 3 of 5)	3787	NM_010186	14129	Mm.150	NM_010186	ENSMUSG00000015947	Fcgr1	AI323638|AV092959|CD64|FcgammaRI|IGGHAFC	Fc receptor, IgG, high affinity I	protein-coding
common_peak2-27075-149-212-0.194250877010235-0.789059907002298	chr3	30505527	30509690	+	0	NA	intron (NM_030557, intron 3 of 7)	intron (NM_030557, intron 3 of 7)	6599	NM_001289621	80732	Mm.200378	NM_030557	ENSMUSG00000037730	Mynn	2810011C24Rik|AA415053|AI661031|AW049392|Mynr|SBBIZ1	myoneurin	protein-coding
unique_peak2-35554-6-10--0.894033508256995-1.21398586181642	chr17	65614110	65614513	+	0	NA	intron (NM_001289485, intron 15 of 15)	Lx9|LINE|L1	275811	NM_001008973	381107	Mm.141275	NM_001008973	ENSMUSG00000045036	Tmem232	E130009J12Rik|Gm940|Tes13-L|Tes13-S	transmembrane protein 232	protein-coding
unique_peak1-6253-8-6-0.197867495889966-1.03789460276074	chr7	19664492	19664988	+	0	NA	intron (NM_010058, intron 2 of 4)	intron (NM_010058, intron 2 of 4)	3191	NM_010058	13401	Mm.2852	NM_010058	ENSMUSG00000030410	Dmwd	DMR-N9|Dm9	dystrophia myotonica-containing WD repeat motif	protein-coding
common_peak1-17300-31-28-0.367257675685551-0.572500200098098	chr6	137520143	137521149	+	0	NA	intron (NM_001271588, intron 1 of 20)	B4|SINE|B4	-1116	NM_001271587	13860	Mm.235346	NM_007945	ENSMUSG00000015766	Eps8	AW261790	epidermal growth factor receptor pathway substrate 8	protein-coding
unique_peak1-2648-17-2-2.63333383748388-3.75443312462699	chr16	45872797	45873646	+	0	NA	Intergenic	Intergenic	-28730	NM_001252442	208177	Mm.211477	NM_153412	ENSMUSG00000033149	Phldb2	AV253284|C820004H04Rik|LL5b|LL5beta	pleckstrin homology-like domain, family B, member 2	protein-coding
common_peak1-15824-9-7-0.18961340640422-1.05908390183068	chr5	109690409	109690952	+	0	NA	Intergenic	L1_Mus1|LINE|L1	35895	NM_001104626	211223	Mm.469881	NM_001104626	ENSMUSG00000091375	Vmn2r15	EG211223	vomeronasal 2, receptor 15	protein-coding
common_peak1-18692-10-7-0.356415345008769-1.12966497611638	chr8	120535981	120536499	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-210411	NM_026758	68533	Mm.181836	NM_026758	ENSMUSG00000031843	Mphosph6	1110001M01Rik|AA536809|C86426	M phase phosphoprotein 6	protein-coding
unique_peak2-37865-21-23--0.0154732354549205-0.305650498375555	chr5	137440216	137441441	+	0	NA	intron (NM_001163243, intron 2 of 4)	intron (NM_001163243, intron 2 of 4)	2881	NM_025562	66437	Mm.25849	NM_025562	ENSMUSG00000019054	Fis1	2010003O14Rik|Ttc11	fission 1 (mitochondrial outer membrane) homolog (yeast)	protein-coding
unique_peak2-37132-4-5--0.608423014574403-0.909929411522249	chr4	15944796	15945167	+	0	NA	Intergenic	RMER4B|LTR|ERVK	-3957	NM_145950	209212	Mm.46455	NM_145950	ENSMUSG00000041153	Osgin2	BC010311|C230027H09Rik	oxidative stress induced growth inhibitor family member 2	protein-coding
unique_peak1-259-6-0-2.5653981103803-2.10720996964787	chr1	91880865	91881391	+	0	NA	intron (NM_139152, intron 3 of 5)	Lx9|LINE|L1	30024	NM_139152	208372	Mm.215164	NM_139152	ENSMUSG00000067081	Asb18	Asb-18	ankyrin repeat and SOCS box-containing 18	protein-coding
unique_peak1-2379-9-7-0.18961340640422-1.05908390183068	chr15	96035296	96035809	+	0	NA	Intergenic	L1M2|LINE|L1	-7147	NR_040423	70040	Mm.437832	NR_040423		2610037D02Rik	AU024679	RIKEN cDNA 2610037D02 gene	ncRNA
common_peak1-13087-10-6-0.549060422951165-1.21398586181642	chr19	6996036	6996502	+	0	NA	promoter-TSS (NM_007953)	promoter-TSS (NM_007953)	29	NM_007953	26379	Mm.386776	NM_007953	ENSMUSG00000024955	Esrra	ERRalpha|Err1|Estrra|Nr3b1	estrogen related receptor, alpha	protein-coding
common_peak2-32194-16-22--0.405298313788951-0.440610794044987	chr9	119052769	119053655	+	0	NA	intron (NM_177117, intron 33 of 36)	intron (NM_177117, intron 33 of 36)	12999	NM_146230	235674	Mm.379402	NM_146230	ENSMUSG00000010651	Acaa1b	-	acetyl-Coenzyme A acyltransferase 1B	protein-coding
unique_peak1-2393-23-0-4.72176750450908-NA	chr15	97574297	97575231	+	0	NA	TTS (NM_144850)	TTS (NM_144850)	-12928	NM_001168693	19011	Mm.1001	NM_008902	ENSMUSG00000022468	Endou	Pp11r|Tcl-30	endonuclease, polyU-specific	protein-coding
common_peak2-22945-10-11--0.228547155712387-0.31137425193576	chr14	48289443	48289912	+	0	NA	intron (NM_001293635, intron 3 of 40)	intron (NM_001293635, intron 3 of 40)	6246	NM_008477	16709	Mm.3110	NM_008477	ENSMUSG00000021843	Ktn1	-	kinectin 1	protein-coding
unique_peak1-1428-15-7-1.01216475055566-1.08658567012551	chr12	85451863	85452552	+	0	NA	Intergenic	Intergenic	-3071	NM_028821	105000	Mm.101525	NM_028821	ENSMUSG00000042523	Dnal1	1700010H15Rik|AW121714|Dnalc1|E330027P08Rik	dynein, axonemal, light chain 1	protein-coding
unique_peak2-35259-5-11--1.28934283672701-1.477227296591	chr17	28327729	28328280	+	0	NA	intron (NM_172617, intron 3 of 14)	intron (NM_172617, intron 3 of 14)	13641	NM_172617	224656	Mm.267359	NM_172617	ENSMUSG00000024220	Zfp523	2810027J07|BC025615|Znf76	zinc finger protein 523	protein-coding
unique_peak1-2647-13-6-0.971117108580164-1.01572999746118	chr16	45871215	45871800	+	0	NA	Intergenic	Intergenic	-27016	NM_001252442	208177	Mm.211477	NM_153412	ENSMUSG00000033149	Phldb2	AV253284|C820004H04Rik|LL5b|LL5beta	pleckstrin homology-like domain, family B, member 2	protein-coding
common_peak2-22738-23-21-0.262335885871783-0.416752705545949	chr13	109685277	109686157	+	0	NA	intron (NM_011056, intron 2 of 16)	RCHARR1|DNA|MER1_type	241346	NM_011056	238871	Mm.434429	NM_011056		Pde4d	9630011N22Rik|Dpde3	phosphodiesterase 4D, cAMP specific	protein-coding
common_peak1-18051-15-25--0.688274967585436-0.73354163167379	chr7	144942696	144943422	+	0	NA	Intergenic	Intergenic	313702	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
common_peak2-25151-8-4-0.683294323060208-1.21878474469819	chr18	46859009	46859388	+	0	NA	Intergenic	Intergenic	28798	NM_033037	12583	Mm.241056	NM_033037	ENSMUSG00000033022	Cdo1	1300002L19Rik|Cdo|D18Ucla3	cysteine dioxygenase 1, cytosolic	protein-coding
common_peak2-26631-5-5--0.289342836727009-0.909929411522249	chr2	119175673	119176100	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-1092	NM_026929	69065	Mm.35083	NM_026929	ENSMUSG00000027313	Chac1	1810008K03Rik	ChaC, cation transport regulator 1	protein-coding
common_peak2-24122-12-18--0.599151528355947-0.476916024233333	chr16	33777443	33778052	+	0	NA	Intergenic	Intergenic	-16376	NM_010739	17063	Mm.3177	NM_010739	ENSMUSG00000022824	Muc13	114/A10|14/A10|AI159736|Lrrp|Ly64|NJ-1	mucin 13, epithelial transmembrane	protein-coding
unique_peak1-2602-7-2-1.21412832957703-1.45399745587252	chr16	33191619	33192138	+	0	NA	intron (NM_176840, intron 1 of 12)	LTR40a|LTR|ERVL	6721	NM_176840	106326	Mm.486405	NM_176840	ENSMUSG00000022807	Osbpl11	9430097N02Rik|AI132306|AU019795|ORP-11	oxysterol binding protein-like 11	protein-coding
common_peak1-11620-17-18--0.0296311752385474-0.306899554715732	chr16	18836460	18837176	+	0	NA	exon (NM_001033164, exon 2 of 3)	exon (NM_001033164, exon 2 of 3)	145	NM_001033164	72307	Mm.36907	NM_001033164	ENSMUSG00000071632	2510002D24Rik	2410043I01Rik|AA163535|AA409624|DXMgi27	RIKEN cDNA 2510002D24 gene	protein-coding
unique_peak2-39882-3-5--0.998945590680433-0.96108193396963	chrX	74393565	74393933	+	0	NA	Intergenic	Intergenic	-362817	NM_020601	21372	Mm.258476	NM_020601	ENSMUSG00000025246	Tbl1x	5330429M20|Tbl1	transducin (beta)-like 1 X-linked	protein-coding
unique_peak1-4816-10-0-3.35641534500877-3.31132995230379	chr3	144256262	144256806	+	0	NA	intron (NM_053102, intron 3 of 4)	intron (NM_053102, intron 3 of 4)	23143	NM_053102	93684	Mm.29812	NM_053102	ENSMUSG00000037072	Sep15	9430015P09Rik	selenoprotein	protein-coding
common_peak2-28537-51-55-0.267568903544969-0.557749827489198	chr5	147291769	147293259	+	0	NA	Intergenic	Intergenic	-1005	NM_001243104	623198	Mm.489582	NM_001243104	ENSMUSG00000096344	Gm6408	-	predicted gene 6408	protein-coding
common_peak1-14067-16-16-0.0308008010177225-0.307611222530525	chr2	120563305	120564130	+	0	NA	3' UTR (NM_080788, exon 16 of 16)	3' UTR (NM_080788, exon 16 of 16)	-6464	NM_026891	68968	Mm.2289	NM_026891	ENSMUSG00000027284	Cdan1	1500015A01Rik|AI448026|AW492297|CDA-I|CDA1|CDAI	congenital dyserythropoietic anemia, type I (human)	protein-coding
common_peak2-32015-23-38--0.563634714353168-0.792515101870073	chr9	75037623	75038412	+	0	NA	intron (NM_010864, intron 30 of 40)	intron (NM_010864, intron 30 of 40)	-41804	NM_001081322	208943	Mm.41339	NM_001081322	ENSMUSG00000033590	Myo5c	9130003O20Rik|BB085560|C330029I24	myosin VC	protein-coding
common_peak2-30189-27-32--0.0528481684632176-0.301029995663997	chr7	29391981	29393208	+	0	NA	TTS (NM_175319)	TTS (NM_175319)	-9391	NM_027470	70584	Mm.21876	NM_027470	ENSMUSG00000030602	Pak4	5730488L07Rik|AW555722|mKIAA1142	p21 protein (Cdc42/Rac)-activated kinase 4	protein-coding
unique_peak2-33464-1-4--1.94898510510411-1.10720996964787	chr11	68939169	68939527	+	0	NA	promoter-TSS (NM_011786)	promoter-TSS (NM_011786)	-531	NM_011786	23801	Mm.41989	NM_011786	ENSMUSG00000020892	Aloxe3	e-LOX-3|eLOX-3	arachidonate lipoxygenase 3	protein-coding
common_peak2-28719-9-11--0.395349094316936-0.344532117358383	chr5	35893517	35893985	+	0	NA	Intergenic	MTC-int|LTR|MaLR	23968	NM_030208	78890	Mm.98522	NM_030208		Trmt44	2310079F23Rik|Mettl19	tRNA methyltransferase 44	protein-coding
unique_peak2-39580-5-9--1.02630843089322-1.21398586181642	chr9	75766454	75766966	+	0	NA	Intergenic	L1Md_T|LINE|L1	-96074	NM_173731	208982	Mm.82306	NM_173731	ENSMUSG00000007908	Hmgcll1	BC037381	3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1	protein-coding
common_peak1-8117-39-28-0.757780251791582-1.56058662248873	chr1	184260553	184262287	+	0	NA	intron (NM_175127, intron 1 of 4)	intron (NM_175127, intron 1 of 4)	10317	NM_175127	67948	Mm.30737	NM_175127	ENSMUSG00000047539	Fbxo28	4833428J17Rik|5730505P19Rik|D1Ertd578e|Fbx28|mKIAA0483	F-box protein 28	protein-coding
common_peak2-27298-11-14--0.398197011356905-0.379391706698377	chr3	60498785	60499249	+	0	NA	Intergenic	(A)n|Simple_repeat|Simple_repeat	193843	NM_001253708	56758	Mm.255723	NM_020007	ENSMUSG00000027763	Mbnl1	Mbnl|mKIAA0428	muscleblind-like 1 (Drosophila)	protein-coding
unique_peak2-39906-2-9--2.23938235115068-1.87199725847353	chrX	96098137	96098636	+	0	NA	Intergenic	ID4_|SINE|ID	-12062	NM_052976	94190	Mm.254336	NM_052976		Ophn1	C130037N19Rik	oligophrenin 1	protein-coding
unique_peak1-6731-8-1-2.00522241794757-2.05605744720049	chr8	45333143	45333671	+	0	NA	Intergenic	L1Md_T|LINE|L1	-548562	NM_001079931	384814	Mm.491652	NM_001079931		Gm5347	EG384814	predicted gene 5347	protein-coding
common_peak1-7731-15-14-0.105274154947137-0.330004445983672	chr1	88533564	88534290	+	0	NA	Intergenic	Intergenic	33221	NM_010933	18159	Mm.12802	NM_010933	ENSMUSG00000026241	Nppc	CNP|lbab	natriuretic peptide type C	protein-coding
common_peak1-17238-57-23-1.68107053935777-6.98355562874783	chr6	128296038	128297683	+	0	NA	intron (NM_011657, intron 1 of 10)	intron (NM_011657, intron 1 of 10)	9009	NM_011657	22158	Mm.291783	NM_011657	ENSMUSG00000001521	Tulp3	2310022L06Rik|AI316887	tubby-like protein 3	protein-coding
common_peak2-22346-9-11--0.395349094316936-0.344532117358383	chr13	23749846	23750502	+	0	NA	Intergenic	Intergenic	25654	NM_178189	319164	Mm.261973	NM_178189	ENSMUSG00000069270	Hist1h2ac	-	histone cluster 1, H2ac	protein-coding
common_peak2-27483-14-21--0.560215458279653-0.519193887192484	chr3	94565077	94565694	+	0	NA	exon (NM_001293727, exon 21 of 21)	exon (NM_001293727, exon 21 of 21)	25052	NM_001293727	70737	Mm.87634	NM_001037711	ENSMUSG00000068876	Cgn	6330408J11Rik	cingulin	protein-coding
common_peak1-10721-44-40-0.464340829950451-0.951347777694914	chr14	62759550	62761174	+	0	NA	Intergenic	MTE-int|LTR|MaLR	151454	NM_173419	239133	Mm.127330	NM_173419	ENSMUSG00000048281	Dleu7	BC038059	deleted in lymphocytic leukemia, 7	protein-coding
common_peak2-25482-17-13-0.410941416147434-0.546772548767014	chr19	4878560	4879156	+	0	NA	promoter-TSS (NM_013456)	promoter-TSS (NM_013456)	168	NM_001168517	70605	Mm.36885	NM_027476	ENSMUSG00000006463	Zdhhc24	5730496N17Rik|Leng4	zinc finger, DHHC domain containing 24	protein-coding
common_peak1-19048-26-13-1.12054417010086-1.80107744087171	chr9	65561586	65562516	+	0	NA	intron (NM_172536, intron 3 of 9)	intron (NM_172536, intron 3 of 9)	37696	NM_001301307	18247	Mm.116749	NM_010952	ENSMUSG00000040652	Oaz2	AZ-2|AZ2|Oaz2-ps|Sez15	ornithine decarboxylase antizyme 2	protein-coding
unique_peak2-39105-1-5--2.2120195109379-1.32905871926422	chr8	79382872	79383306	+	0	NA	intron (NR_028579, intron 1 of 1)	intron (NR_028579, intron 1 of 1)	40983	NR_028579	100039211	Mm.367571	NR_028579	ENSMUSG00000074235	Gm10649	ENSMUSG00000074235	predicted gene 10649	ncRNA
common_peak2-21279-16-27--0.689091279789542-0.798885335210229	chr11	69996590	69997329	+	0	NA	Intergenic	Intergenic	16834	NM_010796	17312	Mm.252405	NM_010796	ENSMUSG00000000318	Clec10a	CD301a|M-ASGP-BP-1|Mgl|Mgl1	C-type lectin domain family 10, member A	protein-coding
common_peak2-23463-6-8--0.60452689106201-1.03789460276074	chr15	72652959	72653379	+	0	NA	intron (NM_001164641, intron 17 of 17)	L1_Mur2|LINE|L1	-12415	NR_002864	353342	Mm.440245	NR_002864		Peg13	-	paternally expressed 13	ncRNA
unique_peak1-3420-15-6-1.20480982849805-1.32521814697968	chr19	5988672	5989478	+	0	NA	3' UTR (NM_007600, exon 22 of 22)	3' UTR (NM_007600, exon 22 of 22)	-2932	NM_198650	381203	Mm.329638	NM_198650	ENSMUSG00000037451	Slc22a20	Gm963|OAT1-L|mOAT6	solute carrier family 22 (organic anion transporter), member 20	protein-coding
common_peak1-19354-19-36--0.806766038967264-1.16836819221353	chrX	12087191	12087907	+	0	NA	Intergenic	LTR16C|LTR|ERVL	-77336	NM_027439	70495	Mm.25148	NM_027439	ENSMUSG00000031007	Atp6ap2	(P)RR|5730403E06Rik|APT6M8-9|ATP6M8-9|Atp6ip2|M8-9	ATPase, H+ transporting, lysosomal accessory protein 2	protein-coding
common_peak1-7589-78-92-0.267662283052504-0.727493611084222	chr1	55026541	55027848	+	0	NA	Intergenic	Intergenic	-43963	NM_001081433	329154	Mm.397910	NM_001081433	ENSMUSG00000052331	Ankrd44	4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B	ankyrin repeat domain 44	protein-coding
unique_peak1-4030-15-0-4.01216475055566-5.11750992628768	chr2	50824075	50824840	+	0	NA	Intergenic	Intergenic	59253	NR_033595	227885	Mm.301654	NR_033595	ENSMUSG00000083270	Gm13498	OTTMUSG00000012426	heat shock protein 90 alpha (cytosolic), class B member 1 pseudogene	pseudo
common_peak1-7510-17-31--0.781703661794962-0.932560489028298	chr1	16656262	16657121	+	0	NA	intron (NM_027415, intron 1 of 2)	PB1|SINE|Alu	1419	NM_026392	70397	Mm.194225	NM_026392	ENSMUSG00000025940	Tmem70	1110020A09Rik|2210416J16Rik	transmembrane protein 70	protein-coding
common_peak1-12835-23-22-0.198205548452068-0.373496418836697	chr18	70052345	70053379	+	0	NA	Intergenic	Intergenic	-32351	NM_201362	381175	Mm.266831	NM_201362	ENSMUSG00000038903	Ccdc68	BC046343	coiled-coil domain containing 68	protein-coding
common_peak2-30657-5-6--0.511735258063458-0.947717972411649	chr7	100533188	100533559	+	0	NA	Intergenic	Intergenic	304984	NM_021427	58238	Mm.113787	NM_021427		Fam181b	A830059I20Rik|AB041569	family with sequence similarity 181, member B	protein-coding
common_peak1-10500-15-10-0.552733131918359-0.604422558181019	chr14	31407701	31408531	+	0	NA	TTS (NM_011103)	TTS (NM_011103)	22781	NR_037237	100526475		NR_037237		Mir3076	mmu-mir-3076	microRNA 3076	ncRNA
unique_peak2-32966-7-7--0.200909169701811-0.97990265578305	chr10	45779657	45780163	+	0	NA	Intergenic	Intergenic	252400	NR_040624	320363	Mm.123343	NR_040624		D030045P18Rik	-	RIKEN cDNA D030045P18 gene	ncRNA
common_peak2-25150-81-97-0.257339758893357-0.707505619155811	chr18	46741076	46742484	+	0	NA	Intergenic	MMERVK10C-int|LTR|ERVK	-7593	NM_173394	225471	Mm.149280	NM_173394		Ticam2	B430113A10|TICAM-2|TRAM|Tirp|Trif	toll-like receptor adaptor molecule 2	protein-coding
common_peak2-31621-14-8-0.729291158915332-0.771068449301682	chr8	123064530	123065062	+	0	NA	intron (NM_001145896, intron 1 of 15)	MER5B|DNA|MER1_type	2200	NR_106159	102466849		NR_106159		Mir7687	mmu-mir-7687	microRNA mir-7687	ncRNA
unique_peak2-33073-1-6--2.43441193227435-1.56314192529759	chr10	79706554	79706987	+	0	NA	3' UTR (NM_023431, exon 14 of 14)	3' UTR (NM_023431, exon 14 of 14)	-5427	NM_029272	75406	Mm.28712	NM_029272	ENSMUSG00000020153	Ndufs7	1010001M04Rik	NADH dehydrogenase (ubiquinone) Fe-S protein 7	protein-coding
unique_peak2-33175-2-12--2.61789397440441-2.55640854263862	chr10	95514565	95515007	+	0	NA	Intergenic	Intergenic	111489	NM_001001932	216238	Mm.210035	NM_001001932	ENSMUSG00000036499	Eea1	A430109M19Rik|B230358H09Rik|ZFYVE2	early endosome antigen 1	protein-coding
common_peak1-13005-10-9-0.0344872501214071-1.05503135781948	chr19	4756561	4757106	+	0	NA	intron (NM_025717, intron 1 of 3)	CpG	308	NM_025717	66704	Mm.396734	NM_025717	ENSMUSG00000033760	Rbm4b	4921506I22Rik|AI504630|AI506404|Lark2	RNA binding motif protein 4B	protein-coding
unique_peak1-7018-28-6-2.24560419776386-4.76954767079794	chr8	125618963	125620142	+	0	NA	intron (NM_153176, intron 16 of 16)	B1_Mur1|SINE|Alu	-6698	NM_016738	270106	Mm.319719	NM_016738	ENSMUSG00000000740	Rpl13	A52|L13	ribosomal protein L13	protein-coding
common_peak1-13388-185-140-1.16587465156144-15.4417828658259	chr19	46968661	46972268	+	0	NA	intron (NM_029810, intron 9 of 17)	(GGGAA)n|Simple_repeat|Simple_repeat	66377	NM_029810	76952	Mm.40965	NM_029810	ENSMUSG00000025041	Nt5c2	2010002I23Rik|CnII|ENSMUSG00000025039|Gm9751|Gmp|Nt5b|Pnt5|cN-II	5'-nucleotidase, cytosolic II	protein-coding
unique_peak2-39901-3-9--1.73591118484664-1.57096726280955	chrX	94540611	94541187	+	0	NA	intron (NM_001161433, intron 3 of 6)	Lx7|LINE|L1	31649	NM_001161432	245527	Mm.189270	NM_175540	ENSMUSG00000034457	Eda2r	9430060M22Rik|TNFRSF27|Xedar	ectodysplasin A2 receptor	protein-coding
unique_peak1-2217-8-1-2.00522241794757-2.05605744720049	chr15	73459182	73459705	+	0	NA	Intergenic	Intergenic	-4269	NM_001033219	106068	Mm.212813	NM_001033219	ENSMUSG00000079020	Slc45a4	9330175B01Rik|AW552276	solute carrier family 45, member 4	protein-coding
unique_peak1-4911-19-4-2.08075923177432-3.05312482518673	chr4	48278735	48279627	+	0	NA	intron (NM_029572, intron 1 of 11)	intron (NM_029572, intron 1 of 11)	13280	NM_029572	76299	Mm.317701	NM_029572	ENSMUSG00000028343	Erp44	1110001E24Rik|AI849526|AL033348|Txndc4	endoplasmic reticulum protein 44	protein-coding
common_peak1-18564-24-28--0.0647710923598552-0.301029995663979	chr8	105297060	105298310	+	0	NA	intron (NM_009866, intron 1 of 12)	GA-rich|Low_complexity|Low_complexity	11326	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
unique_peak2-33339-10-9-0.0344872501214071-1.05503135781948	chr11	20956317	20956826	+	0	NA	Intergenic	Intergenic	-34756	NM_023324	67245	Mm.28957	NM_023324	ENSMUSG00000020134	Peli1	2810468L03Rik|A930031K15Rik|AA409794|AI586297|D11Ertd676e	pellino 1	protein-coding
unique_peak2-39950-7-31--2.20090916970181-3.85629194841873	chrX	139610105	139611178	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	76504	NM_001040434	209540	Mm.297608	NM_001040434	ENSMUSG00000085584	Rgag1	Gm385|Mar9|Mart9	retrotransposon gag domain containing 1	protein-coding
unique_peak2-34961-0-4--3.16205902536157-1.10720996964787	chr15	96253448	96253792	+	0	NA	intron (NM_028148, intron 9 of 14)	intron (NM_028148, intron 9 of 14)	37654	NM_028148	72193	Mm.324474	NM_028148	ENSMUSG00000033228	Scaf11	1110061H03Rik|2610510E10Rik|AI462454|CASP11|SIP1|SRRP129|Sfrs2ip|Srsf2ip|mKIAA3013	SR-related CTD-associated factor 11	protein-coding
common_peak2-21029-32-58--0.603551030142182-1.11442465192823	chr11	32347224	32348984	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-7268	NM_173784	327900	Mm.260956	NM_173784		Ubtd2	4930571L24|9630054F20Rik|AI645720	ubiquitin domain containing 2	protein-coding
common_peak2-29533-15-11-0.4272022498345-0.503257505534083	chr6	38532440	38532993	+	0	NA	intron (NM_001170848, intron 2 of 8)	intron (NM_001170848, intron 2 of 8)	31272	NM_001170848	192196	Mm.276133	NM_138680	ENSMUSG00000029823	Luc7l2	4930471C18Rik|AA522013|AU015269|CGI59|Cgi74	LUC7-like 2 (S. cerevisiae)	protein-coding
common_peak1-15224-16-18--0.129663871175524-0.307235046933848	chr4	145194413	145195028	+	0	NA	Intergenic	AT_rich|Low_complexity|Low_complexity	-12329	NM_001205101	433801	Mm.276881	NM_001013808		Gm13212	OTTMUSG00000010965	predicted gene 13212	protein-coding
common_peak1-10670-59-104--0.388881516793544-0.982736010510378	chr14	52019451	52020700	+	0	NA	Intergenic	Intergenic	-10601	NM_011686	669149	Mm.377117	NM_011686	ENSMUSG00000000606	Vmn2r88	V2r13|V2r3	vomeronasal 2, receptor 88	protein-coding
unique_peak1-5198-7-7--0.200909169701811-0.97990265578305	chr5	33695207	33695763	+	0	NA	intron (NM_021500, intron 1 of 8)	B4A|SINE|B4	17264	NM_021500	59003	Mm.281642	NM_021500	ENSMUSG00000079562	Maea	1110030D19Rik|EMP|Gid9	macrophage erythroblast attacher	protein-coding
common_peak1-18101-25-17-0.691924903902794-0.98872314135509	chr8	126566034	126567040	+	0	NA	intron (NM_001029876, intron 7 of 8)	(TTTG)n|Simple_repeat|Simple_repeat	19164	NM_001029876	382038	Mm.334891	NM_001029876	ENSMUSG00000031976	Urb2	C77575|mKIAA0133	URB2 ribosome biogenesis 2 homolog (S. cerevisiae)	protein-coding
common_peak1-8682-104-142-0.144873864433769-0.486416920152432	chr11	20200420	20202452	+	0	NA	TTS (NM_018861)	TTS (NM_018861)	31280	NM_018861	55963	Mm.6379	NM_018861	ENSMUSG00000020142	Slc1a4	ASCT-1|ASCT1|AW045657|SATT	solute carrier family 1 (glutamate/neutral amino acid transporter), member 4	protein-coding
common_peak2-25609-20-25--0.212364933549899-0.342639663781856	chr19	8929340	8930285	+	0	NA	Intergenic	Intergenic	4537	NM_001013019	68852	Mm.265792	NM_001013019	ENSMUSG00000071656	Lrrn4cl	1110067I12Rik	LRRN4 C-terminal like	protein-coding
common_peak2-31148-14-13-0.0918612383000403-0.332077462497413	chr8	41016312	41017004	+	0	NA	Intergenic	Intergenic	-288626	NM_001113326	20288	Mm.239291	NM_031195	ENSMUSG00000025044	Msr1	MRS-A|MSR|MSR-A|SR-AI|SR-AII|Scara1|Scvr	macrophage scavenger receptor 1	protein-coding
common_peak2-21061-10-14--0.550475250599749-0.446472590016315	chr11	48820226	48820852	+	0	NA	Intergenic	Intergenic	-14783	NM_001145164	100039796	Mm.482363	NM_001145164	ENSMUSG00000078921	Tgtp2	OTTMUSG00000005537	T cell specific GTPase 2	protein-coding
unique_peak1-4505-10-7-0.356415345008769-1.12966497611638	chr3	21667512	21668085	+	0	NA	Intergenic	Intergenic	-307776	NM_030732	81004	Mm.202966	NM_030732	ENSMUSG00000027630	Tbl1xr1	8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1	transducin (beta)-like 1X-linked receptor 1	protein-coding
common_peak2-30215-14-14--0.00767443525087419-0.308519316180257	chr7	128237275	128237893	+	0	NA	intron (NM_139310, intron 5 of 28)	(CATATA)n|Simple_repeat|Simple_repeat	10632	NM_139310	246190	Mm.221073	NM_139310	ENSMUSG00000034990	Otoa	-	otoancorin	protein-coding
common_peak1-16669-18-23--0.272043349492805-0.34651636097721	chr6	3498200	3499075	+	0	NA	intron (NM_024260, intron 13 of 27)	ORR1C2|LTR|MaLR	50244	NM_001167750	73288	Mm.45539	NM_024260	ENSMUSG00000001376	Ccdc132	1700034M03Rik|8430415E05Rik|BLM|C87205|mKIAA1861	coiled-coil domain containing 132	protein-coding
unique_peak2-39842-2-5--1.50241675698448-1.08602067057793	chrX	53056860	53057181	+	0	NA	Intergenic	(GA)n|Simple_repeat|Simple_repeat	252247	NM_001220497	100039055	Mm.380174	NM_001220497		Gm16404	EG625711	predicted gene 16404	protein-coding
unique_peak1-2452-7-5-0.214128329577033-1.01466476204226	chr15	102450207	102450690	+	0	NA	intron (NM_146065, intron 1 of 10)	(TA)n|Simple_repeat|Simple_repeat	5404	NM_146065	223922	Mm.208714	NM_146065	ENSMUSG00000099083	Atf7	1110012F10Rik|9430065F09Rik|AI549878|C130020M04Rik	activating transcription factor 7	protein-coding
common_peak2-24625-8-5-0.420259917226415-1.10484139239135	chr17	34591759	34592092	+	0	NA	intron (NM_001001177, intron 19 of 19)	intron (NM_001001177, intron 19 of 19)	20957	NM_030746	632126	Mm.484958	NM_030746	ENSMUSG00000058435	Btnl4	Btn3a3|EG632126|NG11	butyrophilin-like 4	protein-coding
unique_peak2-35851-5-5--0.289342836727009-0.909929411522249	chr18	75344582	75344966	+	0	NA	intron (NM_027727, intron 13 of 16)	intron (NM_027727, intron 13 of 16)	112197	NR_045394	100503117	Mm.250517	NR_045393		2010010A06Rik	5033420E22Rik	RIKEN cDNA 2010010A06 gene	ncRNA
common_peak1-17754-15-27--0.795190171501948-0.918917574080418	chr7	84151606	84152235	+	0	NA	intron (NM_001199224, intron 22 of 22)	Lx3C|LINE|L1	777147	NM_001199224	244071	Mm.322829	NM_172902	ENSMUSG00000025754	Agbl1	Ccp4|D430020F16|EG244071|Nna1-l1	ATP/GTP binding protein-like 1	protein-coding
unique_peak2-39479-4-7--1.02346051385325-1.09384600808989	chr9	57836470	57836801	+	0	NA	Intergenic	Intergenic	-26189	NM_019779	13070	Mm.302865	NM_019779	ENSMUSG00000032323	Cyp11a1	Cyp11a|Cypxia1|D9Ertd411e|P450scc|Scc|cscc	cytochrome P450, family 11, subfamily a, polypeptide 1	protein-coding
common_peak1-15421-13-9-0.456543935750406-0.53895475198017	chr4	88934107	88934701	+	0	NA	intron (NM_009877, intron 1 of 2)	intron (NM_009877, intron 1 of 2)	6119	NM_009877	12578	Mm.4733	NM_009877	ENSMUSG00000044303	Cdkn2a	ARF-INK4a|Arf|INK4a-ARF|Ink4a/Arf|MTS1|Pctr1|p16|p16(INK4a)|p16INK4a|p19<ARF>|p19ARF	cyclin-dependent kinase inhibitor 2A	protein-coding
common_peak1-18403-146-282--0.251054417386176-1.11045337634832	chr8	72134542	72136942	+	0	NA	exon (NM_172754, exon 5 of 5)	exon (NM_172754, exon 5 of 5)	13332	NM_001045553	234362	Mm.458487	NM_172754	ENSMUSG00000060427	Zfp868	AI449175|AW108241|C530032E20|mszf62	zinc finger protein 868	protein-coding
common_peak2-28974-13-15--0.221527969362231-0.308519316180257	chr5	104407278	104407746	+	0	NA	Intergenic	MLT1A0|LTR|MaLR	-1105	NM_001163486	243168	Mm.284944	NM_198030	ENSMUSG00000034528	Hsd17b13	AI047820|PAN1B-like|Pan1b	hydroxysteroid (17-beta) dehydrogenase 13	protein-coding
common_peak1-19107-19-8-1.23276232521937-1.61268301619756	chr9	75196063	75196904	+	0	NA	intron (NM_013479, intron 1 of 1)	intron (NM_013479, intron 1 of 1)	918	NM_013479	12049	Mm.25988	NM_013479	ENSMUSG00000032191	Bcl2l10	AA420380|AU023065|Boo|C85687|Diva	Bcl2-like 10	protein-coding
unique_peak1-3193-11-9-0.186765489364251-0.344532117358383	chr18	53522735	53523265	+	0	NA	intron (NM_029394, intron 3 of 6)	intron (NM_029394, intron 3 of 6)	54661	NM_008908	19038	Mm.4587	NM_008908	ENSMUSG00000024538	Ppic	CyP-20c	peptidylprolyl isomerase C	protein-coding
common_peak2-24459-58-72-0.106125376010479-0.371520254652761	chr17	23802329	23804140	+	0	NA	intron (NM_153784, intron 5 of 9)	intron (NM_153784, intron 5 of 9)	5744	NM_153784	212733	Mm.59997	NM_153784	ENSMUSG00000043782	Ccdc64b	BICDR-2	coiled-coil domain containing 64B	protein-coding
unique_peak2-37576-3-5--0.998945590680433-0.96108193396963	chr5	36128411	36128795	+	0	NA	intron (NM_001177700, intron 1 of 16)	intron (NM_001177700, intron 1 of 16)	28074	NM_177678	231148	Mm.254446	NM_177678	ENSMUSG00000029095	Ablim2	AI606905|C230091L11	actin-binding LIM protein 2	protein-coding
common_peak1-8558-13-21--0.680959587999529-0.607095980551316	chr10	94047718	94048397	+	0	NA	TTS (NR_106070)	TTS (NR_106070)	887	NR_106070	102466817		NR_106070	miRBase:MI0023706	Mir7211	mmu-mir-7211	microRNA mir-7211	ncRNA
common_peak2-21335-11-11--0.0762689164695427-0.301029995663976	chr11	75935724	75936270	+	0	NA	intron (NM_026664, intron 7 of 21)	intron (NM_026664, intron 7 of 21)	57135	NM_026664	68299	Mm.46397	NM_026664	ENSMUSG00000017288	Vps53	2010002A08Rik|2310040I21Rik|3100002B05Rik|Hccs1	vacuolar protein sorting 53 (yeast)	protein-coding
unique_peak2-35762-4-4--0.345388608740609-0.864171920961574	chr18	39738549	39738940	+	0	NA	Intergenic	Intergenic	-91845	NM_008173	14815	Mm.129481	NM_008173	ENSMUSG00000024431	Nr3c1	GR|Grl-1|Grl1	nuclear receptor subfamily 3, group C, member 1	protein-coding
common_peak1-18185-52-34-0.978976973320733-2.93575584472861	chr8	18950844	18952510	+	0	NA	promoter-TSS (NM_001286469)	promoter-TSS (NM_001286469)	-702	NM_001113350	319581	Mm.111354	NM_176951	ENSMUSG00000039814	Xkr5	5430438H03Rik|XRG5	X Kell blood group precursor-related family, member 5	protein-coding
common_peak1-19305-35-70--0.718376861042178-1.71556178298764	chr9	121857076	121858536	+	0	NA	Intergenic	MTE2a|LTR|MaLR	-2300	NM_177743	245050	Mm.71062	NM_177743	ENSMUSG00000038233	Fam198a	C730027P07Rik	family with sequence similarity 198, member A	protein-coding
common_peak2-25805-17-11-0.633333837483882-0.769930178837768	chr19	37822878	37823568	+	0	NA	Intergenic	L1Md_F2|LINE|L1	50925	NM_007811	13082	Mm.42230	NM_007811	ENSMUSG00000024987	Cyp26a1	Cyp26|P450RA|P450RAI|RAH	cytochrome P450, family 26, subfamily a, polypeptide 1	protein-coding
common_peak1-8108-41-57--0.156832290278912-0.350851889851556	chr1	182527475	182528999	+	0	NA	intron (NM_007415, intron 18 of 22)	intron (NM_007415, intron 18 of 22)	10905	NR_105869	102466761		NR_105869		Mir6904	mmu-mir-6904	microRNA mir-6904	ncRNA
unique_peak2-33165-5-13--1.51173525806346-1.78669045979184	chr10	94035951	94036535	+	0	NA	intron (NM_172051, intron 1 of 3)	(TG)n|Simple_repeat|Simple_repeat	-1759	NM_001168684	319880	Mm.23047	NM_172051	ENSMUSG00000020023	Tmcc3	AW488095|C630016B22Rik|C88213|Tmcc1	transmembrane and coiled coil domains 3	protein-coding
common_peak1-13246-94-19-2.80766147296195-22.8968999523422	chr19	31082119	31083650	+	0	NA	intron (NM_001013833, intron 3 of 17)	intron (NM_001013833, intron 3 of 17)	-74447	NM_031249	83410	Mm.22031	NM_031249	ENSMUSG00000053536	Cstf2t	64kDa|C77975|tCstF-64|tauCstF-64	cleavage stimulation factor, 3' pre-RNA subunit 2, tau	protein-coding
unique_peak1-2802-7-0-2.79909083029819-2.40823996531185	chr17	15845967	15846426	+	0	NA	intron (NM_007690, intron 2 of 35)	intron (NM_007690, intron 2 of 35)	4265	NM_007690	12648	Mm.8137	NM_007690	ENSMUSG00000023852	Chd1	4930525N21Rik|AI851787|AW555109	chromodomain helicase DNA binding protein 1	protein-coding
common_peak2-22038-9-10--0.269818212233077-1.05503135781948	chr12	69297171	69297675	+	0	NA	Intergenic	Intergenic	-527165	NR_033146	100316870	Mm.379794	NR_033146		Gm17821	-	DDB1 and CUL4 associated factor 5 pseudogene	pseudo
common_peak2-23735-46-81--0.459556061369282-0.982726052066001	chr15	96709345	96710712	+	0	NA	Intergenic	Intergenic	176359	NM_027052	69354	Mm.250980	NM_027052	ENSMUSG00000022464	Slc38a4	1110012E16Rik|1700012A18Rik|Ata3|mATA3|mNAT3	solute carrier family 38, member 4	protein-coding
common_peak2-27564-31-72--0.964585888066894-2.7852147810401	chr3	98013438	98014392	+	0	NA	Intergenic	RMER10A|LTR|ERVL	-12164	NM_026328	67709	Mm.46306	NM_026328	ENSMUSG00000027876	Reg4	2010002L15Rik|GISP|RELP	regenerating islet-derived family, member 4	protein-coding
unique_peak2-39976-12-30--1.30542032529924-1.80107744087172	chrX	152015779	152017132	+	0	NA	intron (NM_001093750, intron 2 of 2)	intron (NM_001093750, intron 2 of 2)	41415	NM_001093750	211612	Mm.218811	NM_001093750		Ptchd1	9630036J22Rik|AI848149|Gm387	patched domain containing 1	protein-coding
common_peak2-31790-5-5--0.289342836727009-0.909929411522249	chr9	32709462	32709882	+	0	NA	Intergenic	Intergenic	206045	NM_001038642	23871	Mm.292415	NM_011808	ENSMUSG00000032035	Ets1	AI196000|AI448617|D230050P06|Ets-1|Tpl1	E26 avian leukemia oncogene 1, 5' domain	protein-coding
unique_peak1-4001-20-2-2.90311228387004-4.53603905993749	chr2	35587546	35588461	+	0	NA	Intergenic	Intergenic	35751	NM_001290639	69601	Mm.29629	NM_001001602	ENSMUSG00000026883	Dab2ip	2310011D08Rik|AI480459|Aip1|mKIAA1743	disabled 2 interacting protein	protein-coding
common_peak2-29395-34-29-0.475177931392747-0.820829064533854	chr6	84311938	84312826	+	0	NA	Intergenic	Intergenic	61450	NR_046063	100038556	Mm.387783	NR_046063		Gm10445	ENSMUSG00000072956	predicted gene 10445	ncRNA
unique_peak1-388-8-1-2.00522241794757-2.05605744720049	chr1	153155661	153156380	+	0	NA	Intergenic	Lx9|LINE|L1	-35608	NM_001039512	117198	Mm.33764	NM_028582	ENSMUSG00000023150	Ivns1abp	1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850	influenza virus NS1A binding protein	protein-coding
unique_peak2-34417-6-8--0.60452689106201-1.03789460276074	chr14	17660504	17660880	+	0	NA	intron (NM_001289760, intron 1 of 9)	L1_Mus3|LINE|L1	-252702	NM_001289762	218772	Mm.259318	NM_011243	ENSMUSG00000017491	Rarb	A830025K23|Hap|Nr1b2	retinoic acid receptor, beta	protein-coding
common_peak2-25639-7-12--0.901348887842903-1.31827279259406	chr19	9835954	9836400	+	0	NA	Intergenic	Intergenic	137846	NM_016692	16319	Mm.29755	NM_016692	ENSMUSG00000024660	Incenp	2700067E22Rik|AU019509|C130081E20|C77457	inner centromere protein	protein-coding
common_peak2-28516-23-17-0.551842503066768-0.713114929964887	chr5	89275808	89276718	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-40022	NM_001197147	54403	Mm.41044	NM_018760	ENSMUSG00000060961	Slc4a4	AI835705|NBC|NBC1	solute carrier family 4 (anion exchanger), member 4	protein-coding
common_peak1-9653-14-13-0.0918612383000403-0.332077462497413	chr12	91848622	91849159	+	0	NA	Intergenic	(TCTA)n|Simple_repeat|Simple_repeat	127988	NM_010050	13371	Mm.21389	NM_010050	ENSMUSG00000007682	Dio2	5DII|AI324267|DIOII	deiodinase, iodothyronine, type II	protein-coding
unique_peak1-1480-22-6-1.8399291830298-3.01815507148775	chr12	112851336	112852201	+	0	NA	intron (NM_021516, intron 3 of 16)	intron (NM_021516, intron 3 of 16)	39047	NM_022801	17169	Mm.260504	NM_021516	ENSMUSG00000007411	Mark3	1600015G02Rik|A430080F22Rik|C-TAK1|ETK-1|ETK1|Emk2|MPK10	MAP/microtubule affinity-regulating kinase 3	protein-coding
common_peak2-24535-96-149--0.0627674761405519-0.31955881660111	chr17	27203399	27205182	+	0	NA	intron (NM_080553, intron 1 of 57)	intron (NM_080553, intron 1 of 57)	10041	NM_080553	16440	Mm.458106	NM_080553	ENSMUSG00000042644	Itpr3	Ip3r3|Itpr-3	inositol 1,4,5-triphosphate receptor 3	protein-coding
unique_peak1-3165-7-2-1.21412832957703-1.45399745587252	chr18	38255572	38256073	+	0	NA	Intergenic	Intergenic	-97199	NM_001205336	106952	Mm.247642	NM_139206	ENSMUSG00000024451	Arap3	Centd3|Drag1|E030006K04Rik|cnt-d3	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3	protein-coding
common_peak1-13891-13-9-0.456543935750406-0.53895475198017	chr2	76648392	76649127	+	0	NA	exon (NM_028004, exon 62 of 192)	exon (NM_028004, exon 62 of 192)	135387	NM_031256	83435	Mm.41636	NM_031256	ENSMUSG00000002733	Plekha3	FAPP1	pleckstrin homology domain-containing, family A (phosphoinositide binding specific) member 3	protein-coding
common_peak2-23629-24-33--0.294252938482622-0.390124689062463	chr15	83349358	83350507	+	0	NA	Intergenic	Intergenic	-7360	NM_007546	12124	Mm.267006	NM_007546	ENSMUSG00000016758	Bik	Biklk|Blk|Nbk	BCL2-interacting killer	protein-coding
unique_peak2-38677-8-9--0.316705676939792-1.03275496310833	chr7	100159204	100159669	+	0	NA	Intergenic	L1_Mus2|LINE|L1	-68953	NM_021427	58238	Mm.113787	NM_021427		Fam181b	A830059I20Rik|AB041569	family with sequence similarity 181, member B	protein-coding
common_peak1-8601-10-6-0.549060422951165-1.21398586181642	chr10	111571059	111571551	+	0	NA	Intergenic	Intergenic	-31427	NM_178278	353025	Mm.194428	NM_178278	ENSMUSG00000035694	Caps2	D630005B03Rik	calcyphosphine 2	protein-coding
common_peak1-18720-21-14-0.662598669657717-0.879255460030357	chr8	123050486	123051329	+	0	NA	intron (NM_198671, intron 1 of 15)	intron (NM_198671, intron 1 of 15)	-8850	NM_001145897	382034	Mm.334856	NM_198671	ENSMUSG00000031822	Gse1	2210013I18Rik|mKIAA0182	genetic suppressor element 1	protein-coding
common_peak2-27201-6-5--0.0195643903408542-0.947717972411649	chr3	38433581	38433918	+	0	NA	Intergenic	Intergenic	-50011	NM_001167883	99696	Mm.290937	NM_001033198	ENSMUSG00000044864	Ankrd50	AI662170|E430012K20Rik|mKIAA1223|mKIAA3019	ankyrin repeat domain 50	protein-coding
common_peak1-16881-18-19--0.00900894365901106-0.306598483909153	chr6	70844591	70845547	+	0	NA	intron (NM_010121, intron 13 of 16)	intron (NM_010121, intron 13 of 16)	23847	NM_028825	74221	Mm.273326	NM_028825	ENSMUSG00000051896	Tex37	1700011F03Rik	testis expressed 37	protein-coding
common_peak2-21468-78-179--0.68503200216914-3.68101002344453	chr11	87448150	87448893	+	0	NA	intron (NM_001045527, intron 3 of 5)	intron (NM_001045527, intron 3 of 5)	17855	NM_001045527	327992	Mm.390371	NM_001045527	ENSMUSG00000070345	Hsf5	Gm739|MLZ-220	heat shock transcription factor family member 5	protein-coding
unique_peak2-35102-2-6--1.72480917832092-1.26211192963361	chr16	21204950	21205362	+	0	NA	5' UTR (NM_010143, exon 1 of 16)	5' UTR (NM_010143, exon 1 of 16)	288	NM_010143	13845	Mm.6972	NM_010143	ENSMUSG00000005958	Ephb3	AW456895|Cek10|Etk2|HEK2|MDK5|Sek4|Tyro6	Eph receptor B3	protein-coding
unique_peak2-37890-6-12--1.13504160776079-1.45089835786865	chr5	140203993	140204620	+	0	NA	intron (NM_174850, intron 1 of 16)	RMER20B|LTR|ERVK	7981	NM_174850	231830	Mm.240510	NM_174850	ENSMUSG00000036718	Micall2	A930021H16Rik|JRAB|MICAL-L2|mFLJ00139	MICAL-like 2	protein-coding
unique_peak2-36290-4-14--1.93035110946177-2.23384849113406	chr2	69822514	69823386	+	0	NA	intron (NM_177783, intron 26 of 38)	intron (NM_177783, intron 26 of 38)	-54233	NM_177376	329421	Mm.99648	NM_177376	ENSMUSG00000042064	Myo3b	A430065P19Rik	myosin IIIB	protein-coding
common_peak1-12478-27-30-0.0373496405083609-0.315041925765932	chr17	84188061	84189458	+	0	NA	intron (NM_001171053, intron 12 of 13)	intron (NM_001171053, intron 12 of 13)	57371	NM_025325	107766	Mm.30100	NM_025325	ENSMUSG00000000673	Haao	0610007K21Rik|0610012J07Rik|3-HAO|3-HAOxase|3HAO	3-hydroxyanthranilate 3,4-dioxygenase	protein-coding
common_peak2-26542-50-90--0.466854323719744-1.10599757125155	chr2	92742198	92743313	+	0	NA	Intergenic	Intergenic	-12503	NM_030725	80976	Mm.33490	NM_030725	ENSMUSG00000027220	Syt13	5730409J20Rik|AI549909|mKIAA1427	synaptotagmin XIII	protein-coding
unique_peak1-1328-11-4-1.18676548936425-1.68134727924692	chr12	8386633	8387182	+	0	NA	Intergenic	Intergenic	66668	NM_021429	58240	Mm.309954	NM_021429	ENSMUSG00000020605	Hs1bp3	-	HCLS1 binding protein 3	protein-coding
common_peak1-15877-14-21--0.560215458279653-0.519193887192484	chr5	8052076	8052916	+	0	NA	intron (NM_025618, intron 1 of 7)	RLTR28|LTR|ERVL	-4046	NM_001080974	109552	Mm.96211	NM_025618	ENSMUSG00000003161	Sri	2210417O06Rik|2900070H08Rik|Sor	sorcin	protein-coding
unique_peak2-34545-2-5--1.50241675698448-1.08602067057793	chr14	59447542	59447827	+	0	NA	Intergenic	Lx6|LINE|L1	314046	NM_026461	67932	Mm.65550	NM_026461	ENSMUSG00000021977	1700129C05Rik	-	RIKEN cDNA 1700129C05 gene	protein-coding
common_peak1-17559-15-6-1.20480982849805-1.32521814697968	chr7	31042225	31042938	+	0	NA	intron (NM_146186, intron 12 of 32)	intron (NM_146186, intron 12 of 32)	-20797	NM_001289817	381867	Mm.483986	NM_001289817		Ovol3	Gm1903|movo3	OVO homolog-like 3 (Drosophila)	protein-coding
common_peak1-13315-27-44--0.500307145434439-0.714193724415661	chr19	42127822	42129082	+	0	NA	TTS (NM_025752)	TTS (NM_025752)	1734	NM_025752	66765	Mm.440412	NM_025752	ENSMUSG00000090369	4933411K16Rik	-	RIKEN cDNA 4933411K16 gene	protein-coding
common_peak2-31587-13-14--0.12841856497075-0.301029995663977	chr8	120500230	120500926	+	0	NA	Intergenic	Intergenic	-174749	NM_026758	68533	Mm.181836	NM_026758	ENSMUSG00000031843	Mphosph6	1110001M01Rik|AA536809|C86426	M phase phosphoprotein 6	protein-coding
unique_peak1-677-27-2-3.40658345017408-7.23262596636762	chr10	73201834	73202934	+	0	NA	Intergenic	Intergenic	-82231	NM_001142760	11994	Mm.338933	NM_023115	ENSMUSG00000052613	Pcdh15	BB078305|ENSMUSG00000046980|Gm9815|Ush1f|av|nmf19	protocadherin 15	protein-coding
common_peak1-18712-14-8-0.729291158915332-0.771068449301682	chr8	122583021	122583786	+	0	NA	Intergenic	MTC-int|LTR|MaLR	41969	NM_133967	102193	Mm.240076	NM_133967	ENSMUSG00000031823	Zdhhc7	AL024087|Gramp2	zinc finger, DHHC domain containing 7	protein-coding
unique_peak2-36723-2-5--1.50241675698448-1.08602067057793	chr3	52463746	52464153	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-79697	NR_038079	329639	Mm.131245	NR_038079		Gm2447	100039832|A530017F20	predicted gene 2447	ncRNA
unique_peak1-4913-23-7-1.72176750450908-2.82905316394614	chr4	51576986	51578019	+	0	NA	Intergenic	Intergenic	347952	NM_001162865	74914	Mm.159368	NM_001162865	ENSMUSG00000039555	Cylc2	4930488P18Rik	cylicin, basic protein of sperm head cytoskeleton 2	protein-coding
unique_peak1-2441-11-4-1.18676548936425-1.68134727924692	chr15	101527694	101528312	+	0	NA	Intergenic	Intergenic	-3267	NM_008476	16687	Mm.302399	NM_008476	ENSMUSG00000058354	Krt6a	2310016L08Rik|Krt2-6a|Krt2-6c|MK6a|mK6[a]	keratin 6A	protein-coding
common_peak1-13220-21-8-1.39956426382392-2.11898024768848	chr19	24326235	24327102	+	0	NA	Intergenic	Intergenic	-27152	NM_011597	21873	Mm.104744	NM_011597	ENSMUSG00000024812	Tjp2	ZO-2	tight junction protein 2	protein-coding
unique_peak1-3607-11-5-0.923731083530457-1.477227296591	chr19	32319189	32319792	+	0	NA	intron (NM_144792, intron 4 of 9)	L1MB2|LINE|L1	-33987	NM_001168526	208449	Mm.329810	NM_144792	ENSMUSG00000040451	Sgms1	9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23	sphingomyelin synthase 1	protein-coding
unique_peak1-1463-8-2-1.42025991722641-1.65811743852845	chr12	110488609	110489054	+	0	NA	Intergenic	Lx4B|LINE|L1	-182404	NM_001163175	380785	Mm.342085	NM_001163175	ENSMUSG00000040867	Begain	BM948371|Gm897	brain-enriched guanylate kinase-associated	protein-coding
unique_peak1-7293-8-7-0.00522241794757061-1.00793137938329	chr9	108303006	108303515	+	0	NA	Intergenic	Intergenic	8095	NM_053216	112418	Mm.78287	NM_053216	ENSMUSG00000032611	1700102P08Rik	AI593206	RIKEN cDNA 1700102P08 gene	protein-coding
common_peak2-26480-5-7--0.704380336005853-1.01466476204226	chr2	79519845	79520275	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-27877	NM_172420	75276	Mm.257373	NM_172420	ENSMUSG00000034683	Ppp1r1c	4930565M23Rik|4930579P15Rik	protein phosphatase 1, regulatory (inhibitor) subunit 1C	protein-coding
common_peak2-29885-7-6--0.00826409175941478-0.97990265578305	chr6	113022689	113023011	+	0	NA	intron (NR_027010, intron 1 of 2)	intron (NR_027010, intron 1 of 2)	4388	NR_027010	14910	Mm.280950	NR_027008	ENSMUSG00000086429	Gt(ROSA)26Sor	AV258896|Gtrgeo26|Gtrosa26|R26|ROSA26	gene trap ROSA 26, Philippe Soriano	ncRNA
common_peak2-31745-16-39--1.2036644526193-2.22933157796381	chr9	15709470	15710376	+	0	NA	Intergenic	Intergenic	-30923	NM_145712	244701	Mm.222631	NM_145712	ENSMUSG00000050901	Mtnr1b	Mel-1B-R|Mel1b|Mt2	melatonin receptor 1B	protein-coding
common_peak1-12560-44-68--0.286631622209634-0.511500665010653	chr18	9448970	9450341	+	0	NA	exon (NM_026484, exon 1 of 10)	exon (NM_026484, exon 1 of 10)	493	NM_026484	67974	Mm.86523	NM_026484	ENSMUSG00000024286	Ccny	1700025H17Rik|3110050L10Rik|4631402G10Rik|5730405I09Rik	cyclin Y	protein-coding
unique_peak1-6349-14-4-1.57728806547028-2.4322161449009	chr7	58842789	58843494	+	0	NA	non-coding (NR_073508, exon 20 of 21)	non-coding (NR_073508, exon 20 of 21)	-34059	NM_080853	140919	Mm.256618	NM_080853	ENSMUSG00000030500	Slc17a6	2900073D12Rik|DNPI|VGLUT2	solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 6	protein-coding
common_peak2-28120-10-8-0.186490343566457-1.078512453669	chr4	89124612	89125039	+	0	NA	Intergenic	Intergenic	-167884	NM_007670	12579	Mm.423094	NM_007670	ENSMUSG00000073802	Cdkn2b	AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b	cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)	protein-coding
common_peak2-22078-27-39--0.330382143992127-0.451135909022758	chr12	76765405	76766068	+	0	NA	intron (NM_028203, intron 1 of 1)	intron (NM_028203, intron 1 of 1)	4788	NM_028203	72338	Mm.341719	NM_028203	ENSMUSG00000045690	Wdr89	2600001A11Rik	WD repeat domain 89	protein-coding
common_peak2-30477-33-33-0.24387472127519-0.447010559430123	chr7	49600152	49601570	+	0	NA	Intergenic	MERVK26-int|LTR|ERVK	84878	NR_028441	628490	Mm.246518	NR_028441	ENSMUSG00000070621	Vmn2r-ps60	Casr-rs4|Gprc2a-rs4	vomeronasal 2, receptor, pseudogene 60	pseudo
common_peak1-7701-69-93-0.0405535955810947-0.319317430124637	chr1	84838192	84840874	+	0	NA	intron (NM_025386, intron 1 of 3)	RSINE1|SINE|B4	3117	NM_025386	66153	Mm.381192	NM_025386	ENSMUSG00000073633	Fbxo36	0610008D19Rik|1110020F21Rik|2410002G19Rik|D1Ertd757e	F-box protein 36	protein-coding
unique_peak1-2069-18-4-1.99099105634099-2.82951996911245	chr15	34571390	34572241	+	0	NA	intron (NM_145469, intron 3 of 10)	L1VL4|LINE|L1	-33013	NR_045883	71637	Mm.410827	NR_045883		4930413F20Rik	-	RIKEN cDNA 4930413F20 gene	ncRNA
common_peak2-22597-9-7-0.18961340640422-1.05908390183068	chr13	73728780	73729199	+	0	NA	Intergenic	Intergenic	-12461	NM_146047	218335	Mm.30099	NM_146047	ENSMUSG00000021610	Clptm1l	C130052I12Rik|Crr9	CLPTM1-like	protein-coding
common_peak2-28478-8-6-0.197867495889966-1.03789460276074	chr4	155487854	155488275	+	0	NA	5' UTR (NM_145557, exon 2 of 10)	5' UTR (NM_145557, exon 2 of 10)	3957	NM_177205	230996	Mm.318925	NM_145557	ENSMUSG00000059939	9430015G10Rik	-	RIKEN cDNA 9430015G10 gene	protein-coding
common_peak1-8162-13-8-0.608547029195456-0.660903317613904	chr1	194677374	194677981	+	0	NA	intron (NM_198247, intron 1 of 3)	intron (NM_198247, intron 1 of 3)	264	NM_001177794	214791	Mm.22806	NM_198247	ENSMUSG00000016262	Sertad4	4833404A09|C130018M11Rik	SERTA domain containing 4	protein-coding
common_peak1-8697-8-8--0.164702583494742-1.00793137938329	chr11	70238030	70238556	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	-7789	NM_001271360	216869	Mm.203747	NM_145429	ENSMUSG00000060216	Arrb2	AI326910|AW122872	arrestin, beta 2	protein-coding
common_peak2-30489-11-6-0.701338662194009-1.32595962126035	chr7	58398815	58399270	+	0	NA	Intergenic	Intergenic	-367357	NR_073508	233246	Mm.254431	NM_177694	ENSMUSG00000055489	Ano5	9330162L24|Gdd1|Tmem16e	anoctamin 5	protein-coding
common_peak2-22426-58-52-0.568029480327298-1.51813377769486	chr13	37777848	37779916	+	0	NA	Intergenic	RSINE1|SINE|B4	-139025	NM_026830	68750	Mm.491109	NM_026830	ENSMUSG00000039087	Rreb1	1110037N09Rik|AA414966|B930013M22Rik	ras responsive element binding protein 1	protein-coding
common_peak1-18229-35-39-0.109442163575141-0.343417008601348	chr8	26119345	26120215	+	0	NA	intron (NM_007404, intron 1 of 22)	intron (NM_007404, intron 1 of 22)	7614	NM_001270996	11502	Mm.28908	NM_007404	ENSMUSG00000031555	Adam9	AU020942|MDC9|Mltng|mKIAA0021	a disintegrin and metallopeptidase domain 9 (meltrin gamma)	protein-coding
common_peak1-14541-7-16--1.28837201095215-1.08658567012551	chr3	31061543	31062042	+	0	NA	intron (NM_008770, intron 2 of 2)	intron (NM_008770, intron 2 of 2)	12950	NM_008770	18417	Mm.4425	NM_008770	ENSMUSG00000037625	Cldn11	Claudin-11|Claudin11|Osp|Otm	claudin 11	protein-coding
common_peak2-27165-12-11-0.0638134843664826-0.337263207250336	chr3	30999354	30999811	+	0	NA	intron (NM_001039090, intron 2 of 6)	intron (NM_001039090, intron 2 of 6)	5602	NM_001039090	20482	Mm.15406	NM_011386	ENSMUSG00000027660	Skil	Skir|SnoN|sno	SKI-like	protein-coding
common_peak1-12775-18-14-0.406028555619833-0.532159081577619	chr18	61224116	61224896	+	0	NA	exon (NM_008809, exon 5 of 23)	exon (NM_008809, exon 5 of 23)	19702	NM_008809	18596	Mm.4146	NM_008809	ENSMUSG00000024620	Pdgfrb	AI528809|CD140b|PDGFR-1|Pdgfr	platelet derived growth factor receptor, beta polypeptide	protein-coding
common_peak1-14262-13-8-0.608547029195456-0.660903317613904	chr2	155826245	155826906	+	0	NA	3' UTR (NM_001145352, exon 5 of 5)	3' UTR (NM_001145352, exon 5 of 5)	3588	NM_001145351	320095	Mm.442175	NM_001145351	ENSMUSG00000074646	6430550D23Rik	-	RIKEN cDNA 6430550D23 gene	protein-coding
unique_peak2-33415-9-21--1.26981821223308-1.37307999835977	chr11	59208138	59208929	+	0	NA	Intergenic	Intergenic	-19378	NM_001045521	216797	Mm.339586	NM_001045521	ENSMUSG00000049291	Prss38	Gm249|Mpn2	protease, serine 38	protein-coding
unique_peak2-37858-4-5--0.608423014574403-0.909929411522249	chr5	136066472	136066864	+	0	NA	Intergenic	RLTRETN_Mm|LTR|ERVK	-17755	NM_019577	56221	Mm.31505	NM_019577	ENSMUSG00000004814	Ccl24	CKb-6|MPIF-2|Scya24	chemokine (C-C motif) ligand 24	protein-coding
common_peak2-21211-71-42-1.21817942401787-5.59881467426711	chr11	61664034	61665222	+	0	NA	intron (NM_013881, intron 2 of 26)	AT_rich|Low_complexity|Low_complexity	3966	NM_013881	29869	Mm.162025	NM_013881	ENSMUSG00000004798	Ulk2	A830085I22Rik|AU015340|Unc51.2|mKIAA0623	unc-51 like kinase 2	protein-coding
common_peak2-21765-50-53-0.286052814315484-0.610031908571722	chr11	116217586	116218970	+	0	NA	intron (NM_027258, intron 8 of 18)	B1_Mus2|SINE|Alu	-21610	NM_008240	15223	Mm.378938	NM_008240	ENSMUSG00000034227	Foxj1	FKHL-13|HFH-4|Hfh4	forkhead box J1	protein-coding
common_peak2-30066-13-9-0.456543935750406-0.53895475198017	chr6	128839224	128839723	+	0	NA	intron (NM_001289706, intron 2 of 6)	intron (NM_001289706, intron 2 of 6)	1669	NM_001254946	232406	Mm.30745	NM_001254946	ENSMUSG00000090164	BC035044	-	cDNA sequence BC035044	protein-coding
unique_peak2-39035-0-5--3.42509343119537-1.32905871926422	chr8	66312555	66312829	+	0	NA	Intergenic	Intergenic	118275	NM_001195687	244495	Mm.485331	NM_001195687	ENSMUSG00000094443	Gm4975	EG244495|Sgo2B	predicted gene 4975	protein-coding
common_peak2-28816-9-8-0.0196884049619079-1.03275496310833	chr5	65455613	65455968	+	0	NA	Intergenic	Intergenic	-66680	NM_175174	71778	Mm.10281	NM_175174	ENSMUSG00000054920	Klhl5	1300013C10Rik	kelch-like 5	protein-coding
common_peak2-23155-10-5-0.771452844287613-1.33892459842472	chr14	120478454	120478749	+	0	NA	Intergenic	Intergenic	-36944	NM_001001490	239283	Mm.138520	NM_001001490	ENSMUSG00000044819	Oxgr1	Cysltr3|Gm299|Gpr80|Gpr99|P2Y15	oxoglutarate (alpha-ketoglutarate) receptor 1	protein-coding
common_peak2-23828-144-145-0.679804977562408-4.88200873245827	chr15	101335890	101338843	+	0	NA	TTS (NR_002872)	TTS (NR_002872)	3119	NR_002872	574415	Mm.491077	NR_002872		Gm6042	EG574415|Kb32p	type II keratin Kb32P	pseudo
common_peak2-31751-49-71--0.163641178417128-0.379881757498728	chr9	20520813	20522357	+	0	NA	intron (NM_173777, intron 1 of 5)	intron (NM_173777, intron 1 of 5)	11073	NM_173777	244723	Mm.293552	NM_173777	ENSMUSG00000032172	Olfm2	A030009A06Rik	olfactomedin 2	protein-coding
unique_peak2-38725-6-17--1.60452689106201-1.49151883326343	chr7	112225899	112226694	+	0	NA	Intergenic	RMER19A|LTR|ERVK	-7936	NM_147044	259046	Mm.377805	NM_147044	ENSMUSG00000096029	Olfr679	MOR40-2	olfactory receptor 679	protein-coding
common_peak2-24716-8-7-0.00522241794757061-1.00793137938329	chr17	46673881	46674250	+	0	NA	intron (NM_001081335, intron 8 of 40)	intron (NM_001081335, intron 8 of 40)	9272	NM_001081335	78309	Mm.329076	NM_001081335	ENSMUSG00000040327	Cul9	1810035I07Rik|Cul-9|Parc|mKIAA0708	cullin 9	protein-coding
unique_peak2-32849-1-5--2.2120195109379-1.32905871926422	chr1	193450911	193451318	+	0	NA	Intergenic	Intergenic	51501	NM_178632	77065	Mm.338175	NM_178632	ENSMUSG00000037461	Ints7	5930412E23Rik	integrator complex subunit 7	protein-coding
unique_peak2-36983-1-8--2.79698201165906-2.05605744720049	chr3	117140264	117140800	+	0	NA	Intergenic	MT2A|LTR|ERVL	-76738	NM_177664	229791	Mm.140138	NM_177664	ENSMUSG00000044667	Lppr4	A330086D10|D3Bwg0562e|PRG-1|mKIAA0455	lipid phosphate phosphatase-related protein type 4	protein-coding
unique_peak2-34387-3-5--0.998945590680433-0.96108193396963	chr13	119689955	119690211	+	0	NA	Intergenic	Intergenic	186577	NM_008002	14165	Mm.317323	NM_008002	ENSMUSG00000021732	Fgf10	AEY17|BB213776|Fgf-10|Gsfaey17	fibroblast growth factor 10	protein-coding
unique_peak2-34206-2-12--2.61789397440441-2.55640854263862	chr13	41605103	41605698	+	0	NA	Intergenic	Intergenic	-22671	NM_001111324	18003	Mm.288980	NM_017464	ENSMUSG00000021365	Nedd9	Cas-L|CasL|HEF1|MEF1|Nedd-9|p105	neural precursor cell expressed, developmentally down-regulated gene 9	protein-coding
common_peak1-15512-9-11--0.395349094316936-0.344532117358383	chr4	116763835	116764397	+	0	NA	Intergenic	(CAAAA)n|Simple_repeat|Simple_repeat	-4845	NM_008958	19207	Mm.287037	NM_008958	ENSMUSG00000028681	Ptch2	ptc2	patched homolog 2	protein-coding
unique_peak1-1864-10-0-3.35641534500877-3.31132995230379	chr14	54912450	54912959	+	0	NA	Intergenic	RLTR4_MM-int|LTR|ERV1	-10104	NM_010991	18348	Mm.436623	NM_010991	ENSMUSG00000048153	Olfr49	IC6|MOR1181	olfactory receptor 49	protein-coding
common_peak2-21795-12-19--0.673152109799724-0.546772548767014	chr11	118145882	118146520	+	0	NA	exon (NM_001033528, exon 4 of 21)	exon (NM_001033528, exon 4 of 21)	5357	NM_001033528	72344	Mm.232293	NM_001033528	ENSMUSG00000033909	Usp36	2700002L06Rik|mKIAA1453	ubiquitin specific peptidase 36	protein-coding
common_peak1-16621-151-262--0.0867780772915507-0.38449314502188	chr6	113377202	113378974	+	0	NA	intron (NM_001301295, intron 5 of 5)	intron (NM_001301295, intron 5 of 5)	7661	NM_178373	14311	Mm.10026	NM_178373	ENSMUSG00000030278	Cidec	CIDE-3|Fsp27	cell death-inducing DFFA-like effector c	protein-coding
common_peak1-12770-26-13-1.12054417010086-1.80107744087171	chr18	60899642	60900913	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-27234	NM_008306	15531	Mm.181862	NM_008306	ENSMUSG00000054008	Ndst1	1200015G06Rik|Hsst|NDST-1|b2b2230Clo	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1	protein-coding
common_peak1-17706-32-32-0.234697899861207-0.451135909022752	chr7	78846424	78847409	+	0	NA	Intergenic	RMER17A2|LTR|ERVK	604565	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding
common_peak2-21873-57-84--0.143357896058773-0.36713912391627	chr12	70974396	70975624	+	0	NA	intron (NM_201519, intron 2 of 30)	(CA)n|Simple_repeat|Simple_repeat	-19082	NM_178628	73991	Mm.474462	NM_178628	ENSMUSG00000021066	Atl1	4930435M24Rik|Adfsp|Fsp1|Spg3|Spg3a	atlastin GTPase 1	protein-coding
common_peak2-22507-9-5-0.604650905683064-1.21398586181642	chr13	52929277	52929695	+	0	NA	TTS (NM_016709)	TTS (NM_016709)	-76912	NR_027893	105404	Mm.184173	NR_027893		BB123696	-	expressed sequence BB123696	ncRNA
common_peak2-23191-144-216-0.108078303997946-0.457417728125404	chr15	79346737	79348871	+	0	NA	intron (NM_134090, intron 1 of 4)	intron (NM_134090, intron 1 of 4)	966	NM_134090	105785	Mm.298199	NM_134090	ENSMUSG00000010830	Kdelr3	AI173274	KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3	protein-coding
unique_peak1-2789-29-7-2.11229008061511-4.7258874491988	chr17	13558286	13559644	+	0	NA	intron (NM_001167578, intron 8 of 11)	HAL1-3A_ME|LINE|L1	11527	NM_001167578	100041352	Mm.490251	NM_001167578	ENSMUSG00000052469	Tcp10c	D17Leh66C|D17Leh66ca|Gm9880|T66C-a|Tcp-10c	t-complex protein 10c	protein-coding
common_peak2-20711-9-12--0.510826311736872-0.394412252720706	chr10	94198688	94199225	+	0	NA	intron (NM_029852, intron 5 of 15)	intron (NM_029852, intron 5 of 15)	47421	NM_029852	77048	Mm.296971	NM_029852	ENSMUSG00000020024	Cep83	2600001G24Rik|4921537D05Rik|5730513H21Rik|Ccdc41	centrosomal protein 83	protein-coding
common_peak2-23698-16-11-0.533301141546906-0.58239619684445	chr15	88853579	88854263	+	0	NA	intron (NM_031260, intron 19 of 26)	intron (NM_031260, intron 19 of 26)	-36235	NM_001002005	406218	Mm.483059	NM_001002005	ENSMUSG00000058441	Panx2	-	pannexin 2	protein-coding
common_peak1-13701-46-23-1.31303344252765-4.01185321998351	chr2	30445012	30446540	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-4788	NM_030137	78617	Mm.40413	NM_030137	ENSMUSG00000047363	Cstad	9530039B02Rik	CSA-conditional, T cell activation-dependent protein	protein-coding
unique_peak2-37774-7-7--0.200909169701811-0.97990265578305	chr5	115731636	115732041	+	0	NA	intron (NM_026504, intron 1 of 6)	Tigger6b|DNA|MER2_type	2127	NM_026504	52064	Mm.290142	NM_026504	ENSMUSG00000041733	Coq5	1810014G04Rik|D5Ertd33e	coenzyme Q5 homolog, methyltransferase (yeast)	protein-coding
unique_peak2-39324-6-12--1.13504160776079-1.45089835786865	chr8	126641943	126642578	+	0	NA	Intergenic	Intergenic	94887	NM_001029876	382038	Mm.334891	NM_001029876	ENSMUSG00000031976	Urb2	C77575|mKIAA0133	URB2 ribosome biogenesis 2 homolog (S. cerevisiae)	protein-coding
unique_peak1-3113-18-5-1.7279566505072-2.39372960542229	chr18	32148947	32149620	+	0	NA	intron (NM_032394, intron 17 of 46)	intron (NM_032394, intron 17 of 46)	-39993	NM_001025381	574402	Mm.391108	NM_001025381	ENSMUSG00000052229	Gpr17	AI853548	G protein-coupled receptor 17	protein-coding
common_peak1-16632-91-127-0.073431945602338-0.354081842086077	chr6	39204841	39207345	+	0	NA	Intergenic	Intergenic	-49321	NM_001033430	338523	Mm.293175	NM_001033430	ENSMUSG00000042599	Kdm7a	A630082K20Rik|BB041802|ENSMUSG00000073143|Jhdm1d|mKIAA1718	lysine (K)-specific demethylase 7A	protein-coding
unique_peak1-4919-7-3-0.799090830298189-1.23214870625617	chr4	55608557	55609046	+	0	NA	Intergenic	Intergenic	-63454	NM_010637	16600	Mm.4325	NM_010637	ENSMUSG00000003032	Klf4	EZF|Gklf|Zie	Kruppel-like factor 4 (gut)	protein-coding
common_peak2-28316-40-30-0.704779372364223-1.49688973786044	chr4	133574522	133575271	+	0	NA	promoter-TSS (NM_145833)	promoter-TSS (NM_145833)	-165	NM_145833	83557	Mm.302567	NM_145833	ENSMUSG00000050966	Lin28a	AL024421|ENSMUSG00000070700|Gm10299|Lin-28|Lin28|Tex17|lin-28A	lin-28 homolog A (C. elegans)	protein-coding
common_peak1-11654-190-242-0.427037859817276-3.06865163685169	chr16	23986720	23989617	+	0	NA	intron (NM_009744, intron 1 of 9)	CpG	530	NM_009744	12053	Mm.347398	NM_009744	ENSMUSG00000022508	Bcl6	Bcl5	B cell leukemia/lymphoma 6	protein-coding
common_peak2-30079-255-268-0.792998069028901-12.0441008118861	chr6	134566190	134567684	+	0	NA	intron (NM_026345, intron 3 of 3)	L2a|LINE|L2	15569	NM_026345	67729	Mm.57648	NM_026345	ENSMUSG00000032718	Mansc1	9130403P13Rik	MANSC domain containing 1	protein-coding
common_peak2-24722-40-42-0.232710928049-0.490454554604827	chr17	46875762	46877516	+	0	NA	intron (NM_028065, intron 3 of 5)	MTA_Mm-int|LTR|MaLR	-10525	NM_010321	14711	Mm.29395	NM_010321	ENSMUSG00000002769	Gnmt	-	glycine N-methyltransferase	protein-coding
common_peak2-28856-16-27--0.689091279789542-0.798885335210229	chr5	73400597	73401493	+	0	NA	intron (NM_173403, intron 2 of 2)	intron (NM_173403, intron 2 of 2)	2902	NM_173403	231290	Mm.491387	NM_173403		Slc10a4	E130304D01	solute carrier family 10 (sodium/bile acid cotransporter family), member 4	protein-coding
common_peak2-29713-11-13--0.298661337805991-0.337263207250336	chr6	83506398	83506894	+	0	NA	intron (NM_024239, intron 6 of 9)	intron (NM_024239, intron 6 of 9)	-11387	NR_078345	100861870	Mm.461230	NR_078345		Gm21284	-	predicted gene, 21284	ncRNA
common_peak2-32017-35-29-0.524479662853985-0.895935469411238	chr9	75236245	75237109	+	0	NA	exon (NM_027418, exon 6 of 6)	exon (NM_027418, exon 6 of 6)	20489	NM_027418	50772	Mm.480076	NM_015806	ENSMUSG00000042688	Mapk6	2610021I23Rik|D130053K17Rik|Erk3|Mapk4|Mapk63|Prkm4|Prkm6	mitogen-activated protein kinase 6	protein-coding
common_peak1-16173-23-12-1.02132778636799-1.44787515926925	chr5	90639664	90640754	+	0	NA	Intergenic	Intergenic	12812	NR_028088	231430	Mm.319697	NM_001033310	ENSMUSG00000035505	Cox18	BC038311	cytochrome c oxidase assembly protein 18	protein-coding
common_peak1-13997-20-11-0.903112283870037-1.11267835143409	chr2	104688645	104689472	+	0	NA	intron (NM_178695, intron 2 of 5)	intron (NM_178695, intron 2 of 5)	949	NM_178695	228413	Mm.259609	NM_178695	ENSMUSG00000027171	Prrg4	9930111I18Rik|TMG4	proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	protein-coding
unique_peak1-5149-14-2-2.31425365963649-3.28500101358144	chr5	17520055	17520736	+	0	NA	intron (NM_001081143, intron 5 of 7)	intron (NM_001081143, intron 5 of 7)	52007	NM_001081143	242851	Mm.332230	NM_001081143	ENSMUSG00000028777	Gnat3	Ggust|Gtn	guanine nucleotide binding protein, alpha transducing 3	protein-coding
common_peak1-11825-15-22--0.511397205501357-0.50761186003982	chr16	78300994	78301739	+	0	NA	promoter-TSS (NM_009988)	promoter-TSS (NM_009988)	-550	NM_009988	13052	Mm.66222	NM_009988	ENSMUSG00000022865	Cxadr	2610206D03Rik|AU016810|AW553441|CAR|MCAR|MCVADR	coxsackie virus and adenovirus receptor	protein-coding
common_peak1-13261-82-81-0.535711139687651-1.87840493054581	chr19	33391609	33392693	+	0	NA	intron (NM_001167818, intron 4 of 6)	intron (NM_001167818, intron 4 of 6)	74634	NM_001167818	67795	Mm.204591	NM_001146342	ENSMUSG00000071573	Rnls	6530404N21Rik|AI452315|AW060440|C10orf59	renalase, FAD-dependent amine oxidase	protein-coding
common_peak2-20031-23-48--0.892942339606128-1.7429888559758	chr1	136415010	136415793	+	0	NA	Intergenic	Intergenic	24164	NM_145510	98710	Mm.198119	NM_145510	ENSMUSG00000042229	Rabif	AI842864|AW549708|E130318E12Rik|MSS4|RASGFR3	RAB interacting factor	protein-coding
common_peak1-11597-11-7-0.508693584251613-1.21681515183528	chr16	17406017	17406568	+	0	NA	exon (NM_023348, exon 1 of 5)	exon (NM_023348, exon 1 of 5)	115	NM_001001983	224020	Mm.5718	NM_001001983	ENSMUSG00000041720	Pi4ka	Pik4ca	phosphatidylinositol 4-kinase, catalytic, alpha polypeptide	protein-coding
unique_peak2-37498-4-8--1.19338551529556-1.21878474469819	chr5	5708534	5708795	+	0	NA	Intergenic	Intergenic	-14096	NM_028734	74051	Mm.274956	NM_028734	ENSMUSG00000015653	Steap2	4921538B17Rik|AI930049|AW045895|IPCA-1|IPCA1|PCANAP1|STAMP1|STMP	six transmembrane epithelial antigen of prostate 2	protein-coding
common_peak1-15981-129-286--0.486386604709618-3.2159722256371	chr5	32134856	32137963	+	0	NA	intron (NM_181281, intron 5 of 10)	B1_Mus1|SINE|Alu	135986	NM_181282	107976	Mm.482126	NM_144541	ENSMUSG00000052139	Bre	6030405P19Rik|AI429776|B830038C02Rik	brain and reproductive organ-expressed protein	protein-coding
unique_peak2-38531-10-16--0.73104749624157-0.604422558181019	chr7	45866141	45866879	+	0	NA	Intergenic	Intergenic	653394	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak1-9562-54-90--0.334708878568962-0.736222529913287	chr11	117821527	117823163	+	0	NA	Intergenic	Intergenic	8335	NM_007707	12702	Mm.3468	NM_007707	ENSMUSG00000053113	Socs3	Cis3|Cish3|EF-10|Ef10|SSI-3|Ssi3	suppressor of cytokine signaling 3	protein-coding
common_peak1-15784-27-33--0.0959168903551033-0.304370854244436	chr4	155488409	155489657	+	0	NA	intron (NM_177205, intron 2 of 9)	B1_Mus1|SINE|Alu	4926	NM_177205	230996	Mm.318925	NM_145557	ENSMUSG00000059939	9430015G10Rik	-	RIKEN cDNA 9430015G10 gene	protein-coding
common_peak2-24998-51-84--0.334467110535129-0.717512109809957	chr18	11656856	11658364	+	0	NA	Intergenic	Intergenic	-134175	NM_001252495	225182	Mm.154275	NM_175458	ENSMUSG00000041238	Rbbp8	9930104E21Rik|CtIP|RBBP-8|RIM|SAE2	retinoblastoma binding protein 8	protein-coding
common_peak1-9014-37-42-0.0997283167837208-0.340524918943711	chr11	60878091	60879591	+	0	NA	promoter-TSS (NM_010603)	promoter-TSS (NM_010603)	-465	NM_010603	16515	Mm.4970	NM_010603		Kcnj12	IRK-2|IRK2|Kir2.2|MB-IRK2	potassium inwardly-rectifying channel, subfamily J, member 12	protein-coding
common_peak2-26352-10-15--0.643584654991231-0.519648556297791	chr2	37430389	37430925	+	0	NA	3' UTR (NM_009261, exon 17 of 17)	3' UTR (NM_009261, exon 17 of 17)	58511	NM_177383	338346	Mm.445325	NM_177383		Gpr21	C230004C13Rik	G protein-coupled receptor 21	protein-coding
common_peak2-28058-27-66--1.07454323956254-2.91651320486995	chr4	59548449	59549965	+	0	NA	intron (NM_178164, intron 1 of 13)	L1MCb|LINE|L1	13029	NM_178164	230257	Mm.331640	NM_144904	ENSMUSG00000028382	Ptbp3	5830471K22Rik|AA407443|AI462022|AW107884|C86549|Rod1	polypyrimidine tract binding protein 3	protein-coding
unique_peak1-6294-13-4-1.45654393575041-2.23384849113406	chr7	29492308	29492890	+	0	NA	Intergenic	RLTR47_MM|LTR|ERV1	-9210	NM_015796	50760	Mm.358659	NM_015796	ENSMUSG00000030598	Fbxo17	Fbg4|Fbx17|Fbxo26	F-box protein 17	protein-coding
common_peak2-27046-73-31-1.69239500642522-9.16145308724845	chr2	180234019	180235773	+	0	NA	5' UTR (NM_018766, exon 1 of 4)	5' UTR (NM_018766, exon 1 of 4)	215	NM_018766	18216	Mm.301712	NM_018766	ENSMUSG00000027568	Ntsr1	NT-1R|NTR-1|NTR1	neurotensin receptor 1	protein-coding
common_peak2-29678-10-13--0.450939577048835-0.386243247519795	chr6	72379235	72379772	+	0	NA	exon (NM_019802, exon 14 of 15)	exon (NM_019802, exon 14 of 15)	-9174	NR_046011	78108	Mm.440743	NR_046011		4930414L22Rik	AI449819	RIKEN cDNA 4930414L22 gene	ncRNA
common_peak1-11167-24-15-0.793209902767717-1.16796998271032	chr15	76203548	76204772	+	0	NA	exon (NM_183099, exon 3 of 8)	exon (NM_183099, exon 3 of 8)	1208	NM_183099	73542	Mm.159026	NM_183099	ENSMUSG00000060794	Tssk5	1700091F14Rik	testis-specific serine kinase 5	protein-coding
common_peak1-12246-101-129-0.231646423707965-0.745101770542585	chr17	35812166	35815314	+	0	NA	Intergenic	RLTR10C|LTR|ERVK	-3113	NM_010364	14885	Mm.10182	NM_010364	ENSMUSG00000001524	Gtf2h4	AW545633|BTF2 p52|TFIIH|p44|p52	general transcription factor II H, polypeptide 4	protein-coding
common_peak2-29058-11-6-0.701338662194009-1.32595962126035	chr5	116009002	116009390	+	0	NA	promoter-TSS (NM_007475)	promoter-TSS (NM_007475)	-280	NM_007475	11837	Mm.5286	NM_007475	ENSMUSG00000067274	Rplp0	36B4|Arbp|L10E	ribosomal protein, large, P0	protein-coding
unique_peak1-4369-8-0-3.00522241794757-2.70926996097583	chr2	157168717	157169142	+	0	NA	intron (NM_010285, intron 1 of 4)	intron (NM_010285, intron 1 of 4)	3462	NM_010285	14601	Mm.389327	NM_010285	ENSMUSG00000027643	Ghrh	Ghrf	growth hormone releasing hormone	protein-coding
unique_peak1-2646-23-6-1.91441258245148-3.22740510021752	chr16	45849088	45850090	+	0	NA	Intergenic	Intergenic	-5098	NM_001252442	208177	Mm.211477	NM_153412	ENSMUSG00000033149	Phldb2	AV253284|C820004H04Rik|LL5b|LL5beta	pleckstrin homology-like domain, family B, member 2	protein-coding
unique_peak2-39454-8-11--0.579740082773585-1.14218153353838	chr9	50746150	50746693	+	0	NA	intron (NM_178710, intron 3 of 15)	L1_Mus4|LINE|L1	70757	NM_178710	235344	Mm.104932	NM_178710	ENSMUSG00000037112	Sik2	G630080D20Rik|Snf1lk2	salt inducible kinase 2	protein-coding
common_peak1-12158-64-103--0.234993316432488-0.557095317016001	chr17	28800547	28801783	+	0	NA	intron (NM_001290320, intron 5 of 19)	(TTTTG)n|Simple_repeat|Simple_repeat	25767	NM_001290320	224661		NM_146076	ENSMUSG00000036196	Slc26a8	-	solute carrier family 26, member 8	protein-coding
common_peak1-16845-13-18--0.469455482805817-0.409888142029227	chr6	53572962	53573622	+	0	NA	intron (NM_172728, intron 3 of 6)	intron (NM_172728, intron 3 of 6)	49924	NM_172728	231991	Mm.321138	NM_172728	ENSMUSG00000053007	Creb5	Crebpa|D430026C09Rik	cAMP responsive element binding protein 5	protein-coding
unique_peak2-37217-14-35--1.27070884108467-2.08778000015695	chr4	83538894	83540798	+	0	NA	Intergenic	L1M4|LINE|L1	368397	NM_001081012	320226	Mm.180032	NM_029117	ENSMUSG00000052407	Ccdc171	4930418J05Rik|4930473A06Rik|A330015D16Rik	coiled-coil domain containing 171	protein-coding
unique_peak1-2020-8-0-3.00522241794757-2.70926996097583	chr15	10672605	10673089	+	0	NA	intron (NR_045063, intron 2 of 6)	intron (NR_045063, intron 2 of 6)	28192	NR_045065	75259	Mm.33928	NR_045063	ENSMUSG00000097058	4930556M19Rik	1700009D01Rik|C130022M03Rik	RIKEN cDNA 4930556M19 gene	ncRNA
unique_peak1-7391-7-0-2.79909083029819-2.40823996531185	chrX	102090543	102091008	+	0	NA	Intergenic	Lx7|LINE|L1	-38169	NM_053206	272790	Mm.165776	NM_053206	ENSMUSG00000031224	Magee2	9630059J11Rik|BB131182|Mage-e2	melanoma antigen, family E, 2	protein-coding
common_peak1-12628-84-74-0.706115368393145-2.87976576234654	chr18	34220473	34221994	+	0	NA	Intergenic	Intergenic	-54373	NM_013512	13824	Mm.3465	NM_013512	ENSMUSG00000024376	Epb4.1l4a	Epb4.1l4|Epb41l4a|NBL4	erythrocyte protein band 4.1-like 4a	protein-coding
common_peak1-13752-42-38-0.456927109004935-0.908349182838243	chr2	33430663	33431973	+	0	NA	intron (NM_010725, intron 2 of 7)	intron (NM_010725, intron 2 of 7)	64713	NM_010725	16917	Mm.39825	NM_010725	ENSMUSG00000038765	Lmx1b	LMX1.1|LMX1.2	LIM homeobox transcription factor 1 beta	protein-coding
common_peak2-29737-19-28--0.455293668465885-0.518921928796332	chr6	85915655	85916480	+	0	NA	Intergenic	LTRIS2|LTR|ERV1	-4406	NM_028099	72102	Mm.24007	NM_028099	ENSMUSG00000030002	Dusp11	2010300F21Rik|AI481497	dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	protein-coding
unique_peak2-37471-3-18--2.66191060340286-2.88232357121378	chr5	3152258	3152982	+	0	NA	Intergenic	Intergenic	-191692	NM_009873	12571	Mm.31672	NM_009873	ENSMUSG00000040274	Cdk6	5830411I20|AI504062|Crk2	cyclin-dependent kinase 6	protein-coding
common_peak2-23653-22-31--0.352715894912595-0.440892966163086	chr15	84987328	84987958	+	0	NA	Intergenic	Intergenic	-1081	NR_040360	100502602	Mm.390830	NR_040360		Gm19277	-	predicted gene, 19277	ncRNA
common_peak2-25169-19-14-0.495796731053168-0.607095980551316	chr18	53524248	53524982	+	0	NA	intron (NM_029394, intron 3 of 6)	intron (NM_029394, intron 3 of 6)	53046	NM_008908	19038	Mm.4587	NM_008908	ENSMUSG00000024538	Ppic	CyP-20c	peptidylprolyl isomerase C	protein-coding
unique_peak2-34467-11-15--0.491306415748387-0.435191258261915	chr14	31495117	31495843	+	0	NA	intron (NM_177815, intron 10 of 12)	intron (NM_177815, intron 10 of 12)	27919	NM_177815	328370	Mm.259657	NM_177815	ENSMUSG00000052395	Rft1	D930025H04	RFT1 homolog (S. cerevisiae)	protein-coding
common_peak1-14841-37-24-0.882136881711094-1.82819694957564	chr3	94587177	94588853	+	0	NA	intron (NM_001037711, intron 1 of 20)	intron (NM_001037711, intron 1 of 20)	2422	NM_001293727	70737	Mm.87634	NM_001037711	ENSMUSG00000068876	Cgn	6330408J11Rik	cingulin	protein-coding
unique_peak1-1980-28-1-4.05295911982146-8.57672668477296	chr14	121713225	121714310	+	0	NA	intron (NM_145465, intron 2 of 10)	intron (NM_145465, intron 2 of 10)	64685	NM_145465	223255	Mm.390756	NM_145465	ENSMUSG00000063410	Stk24	1810013H02Rik|C76483|MST-3|Mst3|STE20	serine/threonine kinase 24	protein-coding
common_peak2-29729-26-12-1.22745937401737-2.03163221100073	chr6	84601742	84602374	+	0	NA	intron (NM_177077, intron 20 of 21)	intron (NM_177077, intron 20 of 21)	-58156	NM_001177713	232174	Mm.255246	NM_175475	ENSMUSG00000063415	Cyp26b1	CP26|P450RAI-2	cytochrome P450, family 26, subfamily b, polypeptide 1	protein-coding
common_peak2-24060-14-14--0.00767443525087419-0.308519316180257	chr16	29579375	29579925	+	0	NA	exon (NM_133752, exon 1 of 29)	exon (NM_133752, exon 1 of 29)	230	NM_001199177	74143	Mm.274285	NM_133752	ENSMUSG00000038084	Opa1	1200011N24Rik|AI225888|AI847218|lilr3|mKIAA0567	optic atrophy 1	protein-coding
common_peak1-16135-30-20-0.777357986713112-1.30767018140166	chr5	72649208	72650618	+	0	NA	intron (NR_003966, intron 10 of 22)	intron (NR_003966, intron 10 of 22)	55331	NM_153389	231287	Mm.32775	NM_153389	ENSMUSG00000046808	Atp10d	9830145H18Rik|ATPVD|D5Buc24e	ATPase, class V, type 10D	protein-coding
common_peak2-22002-24-37--0.454717610675869-0.572500200098104	chr12	55199093	55200184	+	0	NA	Intergenic	Intergenic	105223	NM_028133	112407	Mm.133037	NM_028133	ENSMUSG00000035105	Egln3	2610021G09Rik|AI505553|AI648162|Hif-p4h-3|Phd3|SM-20	egl-9 family hypoxia-inducible factor 3	protein-coding
common_peak2-20703-24-16-0.705747061517378-1.02077663956384	chr10	93422694	93423397	+	0	NA	Intergenic	Intergenic	3563	NR_029764	723908		NR_029764	miRBase:MI0000609	Mir331	Mirn331|mmu-mir-331	microRNA 331	ncRNA
common_peak2-19561-7-10--0.660340788339108-1.12966497611638	chr1	9237136	9237574	+	0	NA	intron (NM_027671, intron 1 of 20)	intron (NM_027671, intron 1 of 20)	52603	NM_001290390	71096	Mm.336395	NM_027671		Sntg1	4933426D16Rik|G1SYN|SYN4	syntrophin, gamma 1	protein-coding
common_peak2-22763-55-119--0.702270724455817-2.60049418611543	chr13	119428343	119429983	+	0	NA	Intergenic	Intergenic	-74343	NM_008002	14165	Mm.317323	NM_008002	ENSMUSG00000021732	Fgf10	AEY17|BB213776|Fgf-10|Gsfaey17	fibroblast growth factor 10	protein-coding
common_peak1-18982-8-15--0.994777582052429-0.771068449301683	chr9	56927414	56927915	+	0	NA	intron (NM_001110350, intron 1 of 20)	intron (NM_001110350, intron 1 of 20)	3481	NM_011378	20466	Mm.15755	NM_011378	ENSMUSG00000042557	Sin3a	AW553200|Sin3|mKIAA4126|mSin3A	transcriptional regulator, SIN3A (yeast)	protein-coding
common_peak2-20384-7-10--0.660340788339108-1.12966497611638	chr10	18876598	18876958	+	0	NA	intron (NR_038021, intron 1 of 3)	intron (NR_038021, intron 1 of 3)	-10266	NR_038022	100504265	Mm.383417	NR_038021		Gm20139	-	predicted gene, 20139	ncRNA
common_peak2-22378-8-5-0.420259917226415-1.10484139239135	chr13	30360623	30360925	+	0	NA	Intergenic	RMER19B|LTR|ERVK	-67451	NM_177322	11607	Mm.35062	NM_177322	ENSMUSG00000049115	Agtr1a	1810074K20Rik|AG2S|AI551199|AT1|AT1a|AT2R1|AT2R1A|Agtr-1a|Agtr1|Angtr-1a	angiotensin II receptor, type 1a	protein-coding
unique_peak2-32518-7-27--2.00826409175941-3.02827458119512	chr1	58973631	58974247	+	0	NA	intron (NM_172406, intron 9 of 15)	B1F|SINE|Alu	56387	NM_172406	70827	Mm.222887	NM_172406	ENSMUSG00000026028	Trak2	2900022D04Rik|4733401O11Rik|AI480836|AW046271|Als2cr3|CALS-C|GRIF-1|GRIF1|OIP98|mKIAA0549	trafficking protein, kinesin binding 2	protein-coding
common_peak1-10287-22-11-1.06232160436625-1.51503956548638	chr13	63154276	63155229	+	0	NA	intron (NM_001289926, intron 3 of 15)	Lx|LINE|L1	88499	NM_001289924	72061	Mm.188105	NM_028079	ENSMUSG00000021458	2010111I01Rik	2300006M17Rik|AP-O|Aopep	RIKEN cDNA 2010111I01 gene	protein-coding
common_peak2-26240-21-8-1.39956426382392-2.11898024768848	chr2	29054808	29055331	+	0	NA	intron (NM_133501, intron 5 of 8)	B3|SINE|B2	48491	NM_133501	171171	Mm.442448	NM_133500	ENSMUSG00000035513	Ntng2	2610016D08Rik|Lmnt2	netrin G2	protein-coding
unique_peak1-4501-11-1-2.50869358425161-2.83420869758413	chr3	18560156	18560766	+	0	NA	Intergenic	L1_Mus2|LINE|L1	-179984	NR_040544	73959	Mm.60616	NR_040544		4930433B08Rik	-	RIKEN cDNA 4930433B08 gene	ncRNA
unique_peak2-39251-10-22--1.16714661104824-1.30248952876293	chr8	117281924	117282836	+	0	NA	intron (NM_019573, intron 8 of 8)	RLTR21|LTR|ERVK	318828	NM_019573	80707	Mm.440420	NM_019573	ENSMUSG00000004637	Wwox	5330426P09Rik|9030416C10Rik|WOX1	WW domain-containing oxidoreductase	protein-coding
unique_peak2-35301-6-8--0.60452689106201-1.03789460276074	chr17	12739637	12740035	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-37219	NM_013667	20518	Mm.17322	NM_013667	ENSMUSG00000040966	Slc22a2	Oct2|Orct2	solute carrier family 22 (organic cation transporter), member 2	protein-coding
unique_peak2-32931-6-8--0.60452689106201-1.03789460276074	chr10	28087026	28087332	+	0	NA	intron (NM_008983, intron 6 of 31)	B4A|SINE|B4	292553	NM_008983	19272	Mm.332303	NM_008983	ENSMUSG00000019889	Ptprk	AI853699|PTPk|RPTPkappa	protein tyrosine phosphatase, receptor type, K	protein-coding
unique_peak1-4-10-6-0.549060422951165-1.21398586181642	chr1	34111004	34111540	+	0	NA	intron (NM_134448, intron 1 of 97)	intron (NM_134448, intron 1 of 97)	42602	NM_134448	13518	Mm.336625	NM_010081	ENSMUSG00000026131	Dst	2310001O04Rik|A830042E19Rik|AW554249|BP230|BPAG1-n|Bpag|Bpag1|Macf2|ah|athetoid|dt|mKIAA0728|nmf203|nmf339	dystonin	protein-coding
unique_peak1-1182-8-0-3.00522241794757-2.70926996097583	chr11	100961503	100961996	+	0	NA	intron (NM_026501, intron 6 of 8)	intron (NM_026501, intron 6 of 8)	-5000	NM_008949	19183	Mm.18344	NM_008949		Psmc3ip	C79099|GT198|HOP2|Tbpip	proteasome (prosome, macropain) 26S subunit, ATPase 3, interacting protein	protein-coding
common_peak1-11234-77-140--0.355024772842796-1.084647106008	chr15	79441080	79442610	+	0	NA	3' UTR (NM_029407, exon 18 of 18)	3' UTR (NM_029407, exon 18 of 18)	-6306	NM_010059	13404	Mm.2524	NM_010059	ENSMUSG00000022429	Dmc1	Dmc1h|Lim15|Mei11|sgdp	DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous recombination	protein-coding
common_peak2-24629-27-27-0.184191028837632-0.393151991482004	chr17	34898824	34899971	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-18555	NM_009780	12268	Mm.477109	NM_009780	ENSMUSG00000073418	C4b	C4|Ss	complement component 4B (Chido blood group)	protein-coding
common_peak1-12947-67-76-0.277624942088094-0.672993412022086	chr19	38124300	38125598	+	0	NA	Intergenic	Intergenic	-4566	NM_028293	74107	Mm.9916	NM_028293	ENSMUSG00000024989	Cep55	1200008O12Rik|2700032M20Rik	centrosomal protein 55	protein-coding
unique_peak1-2479-12-7-0.648775985087639-0.697979855752659	chr16	4593956	4594692	+	0	NA	promoter-TSS (NM_031184)	promoter-TSS (NM_031184)	-389	NM_031184	83396	Mm.134072	NM_031184	ENSMUSG00000014303	Glis2	Gli5|Klf16|Nkl	GLIS family zinc finger 2	protein-coding
common_peak1-18039-10-17--0.813509656433543-0.699649909729472	chr7	143690887	143691424	+	0	NA	Intergenic	Intergenic	-150057	NR_040459	330664	Mm.127762	NR_040459		C230079O03Rik	C230079O03	RIKEN cDNA C230079O03 gene	ncRNA
common_peak1-15449-13-7-0.778472030637769-0.817533494790411	chr4	97776841	97777502	+	0	NA	intron (NM_010905, intron 10 of 10)	(GGGGA)n|Simple_repeat|Simple_repeat	272785	NM_053157	94043	Mm.331719	NM_053157	ENSMUSG00000028563	Tm2d1	2310026L18Rik|AA990549|Bbp	TM2 domain containing 1	protein-coding
common_peak2-21068-18-13-0.505564229170747-0.625923329873571	chr11	49045351	49046164	+	0	NA	Intergenic	Intergenic	-11936	NM_010794	17308	Mm.196933	NM_010794	ENSMUSG00000020346	Mgat1	Mgat-1	mannoside acetylglucosaminyltransferase 1	protein-coding
common_peak1-10064-11-11--0.0762689164695427-0.301029995663976	chr13	21778453	21779196	+	0	NA	Intergenic	L1_Mm|LINE|L1	-11975	NM_146543	258536	Mm.223076	NM_146543	ENSMUSG00000094398	Olfr1360	MOR256-10|MOR256-35	olfactory receptor 1360	protein-coding
common_peak2-31685-20-18-0.240147271147608-0.388034239052786	chr8	127316862	127318018	+	0	NA	5' UTR (NM_198632, exon 1 of 10)	5' UTR (NM_198632, exon 1 of 10)	521	NM_198632	330863	Mm.422769	NM_198632	ENSMUSG00000036913	Trim67	D130049O21Rik|TNL	tripartite motif-containing 67	protein-coding
common_peak2-26650-3-6--1.22133801201688-1.08602067057793	chr2	120154731	120155163	+	0	NA	intron (NR_027618, intron 12 of 25)	intron (NR_027618, intron 12 of 25)	-15046	NM_001024145	271844	Mm.24880	NM_001024145	ENSMUSG00000046971	Pla2g4f	4732472I07Rik|Gm647|Pla2zeta	phospholipase A2, group IVF	protein-coding
common_peak2-32312-8-9--0.316705676939792-1.03275496310833	chrX	56455382	56455799	+	0	NA	intron (NM_001290414, intron 3 of 6)	L1MDa|LINE|L1	-36325	NM_001290415	14168	Mm.7995	NM_010200	ENSMUSG00000031137	Fgf13	Fhf2	fibroblast growth factor 13	protein-coding
common_peak1-17523-14-20--0.493101262421116-0.456667090758524	chr7	28350583	28351392	+	0	NA	intron (NM_175107, intron 6 of 9)	B2_Mm1a|SINE|B2	5492	NM_001122767	66367	Mm.29831	NM_175107	ENSMUSG00000049643	2310022A10Rik	-	RIKEN cDNA 2310022A10 gene	protein-coding
common_peak1-17137-31-37--0.0226888426304619-0.301029995663945	chr6	116107125	116108072	+	0	NA	intron (NM_177412, intron 1 of 5)	Lx3C|LINE|L1	35794	NM_177412	330401	Mm.425352	NM_177412	ENSMUSG00000030126	Tmcc1	3632431M01Rik|mKIAA0779	transmembrane and coiled coil domains 1	protein-coding
common_peak1-18278-44-58--0.0607502147933063-0.302918256338863	chr8	40307417	40308526	+	0	NA	Intergenic	Lx4A|LINE|L1	-75363	NR_044988	621335	Mm.208080	NR_044988		Gm6213	EG621335	predicted gene 6213	ncRNA
unique_peak1-2252-9-3-1.18961340640422-1.57096726280955	chr15	77366875	77367396	+	0	NA	Intergenic	ORR1A4-int|LTR|MaLR	-3390	NM_175391	108956	Mm.86391	NM_175391	ENSMUSG00000044309	Apol7c	2210421G13Rik	apolipoprotein L 7c	protein-coding
common_peak2-22165-59-80--0.0144860020120463-0.301029995664001	chr12	91587949	91589805	+	0	NA	Intergenic	(TTA)n|Simple_repeat|Simple_repeat	388001	NM_010050	13371	Mm.21389	NM_010050	ENSMUSG00000007682	Dio2	5DII|AI324267|DIOII	deiodinase, iodothyronine, type II	protein-coding
common_peak1-9908-12-5-1.06381348436648-1.78669045979184	chr12	86891741	86892301	+	0	NA	Intergenic	Intergenic	-48034	NM_001205052	81703	Mm.103560	NM_030887	ENSMUSG00000034271	Jdp2	Jundm2|Jundp2|TIF	Jun dimerization protein 2	protein-coding
common_peak1-11075-9-8-0.0196884049619079-1.03275496310833	chr15	58544052	58544727	+	0	NA	Intergenic	Intergenic	110593	NM_175212	74868	Mm.293754	NM_175212	ENSMUSG00000062373	Tmem65	2610029O13Rik|4930438D12Rik	transmembrane protein 65	protein-coding
unique_peak2-37871-8-9--0.316705676939792-1.03275496310833	chr5	137745923	137746415	+	0	NA	intron (NM_001109910, intron 2 of 19)	intron (NM_001109910, intron 2 of 19)	2733	NM_031405	83701	Mm.387734	NM_031405	ENSMUSG00000037364	Srrt	2810019G02Rik|ASR2A|ASR2B|ASR2C|ASR2D|Ars2|Asr2	serrate RNA effector molecule homolog (Arabidopsis)	protein-coding
common_peak2-27055-33-48--0.28337228158968-0.459173512026158	chr2	180966671	180968057	+	0	NA	exon (NM_183162, exon 9 of 19)	exon (NM_183162, exon 9 of 19)	9368	NM_183162	229003	Mm.315872	NM_183162	ENSMUSG00000027580	Helz2	PDIP1|Pric285|mKIAA1769|mPDIP1	helicase with zinc finger 2, transcriptional coactivator	protein-coding
common_peak2-29877-19-4-2.08075923177432-3.05312482518673	chr6	108704636	108704987	+	0	NA	Intergenic	RLTR40|LTR|ERVK	-28242	NM_026011	67166	Mm.271178	NM_026011	ENSMUSG00000030105	Arl8b	2610313E07Rik|3100002J04Rik|Arl10c|gie1	ADP-ribosylation factor-like 8B	protein-coding
unique_peak2-34110-3-5--0.998945590680433-0.96108193396963	chr13	21198583	21199001	+	0	NA	Intergenic	Intergenic	-25854	NM_010984	18341	Mm.246536	NM_010984	ENSMUSG00000071522	Olfr263	GA_x5J8B7TTCWC-858-415|IA3|MOR256-31|MOR256-37P|MOR256-61|Olfr263-ps1|Olfr42	olfactory receptor 263	protein-coding
unique_peak2-32796-7-40--2.55846117431989-5.85892640211067	chr1	182019236	182020502	+	0	NA	intron (NM_001033285, intron 12 of 36)	L1MEe|LINE|L1	103747	NM_001163290	67426	Mm.38330	NM_023341	ENSMUSG00000026489	Adck3	4632432J16Rik|AI462003|Cabc1|mKIAA0451	aarF domain containing kinase 3	protein-coding
common_peak1-10169-27-22-0.467983994838223-0.705485015404196	chr13	38527849	38528598	+	0	NA	intron (NM_007556, intron 1 of 6)	intron (NM_007556, intron 1 of 6)	90638	NM_007556	12161	Mm.385759	NM_007556	ENSMUSG00000039004	Bmp6	D13Wsu115e|Vgr1	bone morphogenetic protein 6	protein-coding
unique_peak2-33914-8-19--1.31670567693979-1.30305656033811	chr12	68137512	68138301	+	0	NA	intron (NM_001193266, intron 1 of 16)	intron (NM_001193266, intron 1 of 16)	185630	NM_001193266	320772	Mm.227680	NM_207010		Mdga2	6720489L24Rik|9330209L04Rik|Adp|Mamdc1	MAM domain containing glycosylphosphatidylinositol anchor 2	protein-coding
unique_peak1-3926-12-6-0.841421063030034-1.58711810488664	chr2	26507186	26507782	+	0	NA	Intergenic	Intergenic	-11720	NR_024068	72091	Mm.27103	NR_024068	ENSMUSG00000097052	Snhg7	2610002F03Rik|AI427062	small nucleolar RNA host gene 7	ncRNA
unique_peak2-35855-3-5--0.998945590680433-0.96108193396963	chr18	75478443	75478794	+	0	NA	Intergenic	Intergenic	-21635	NR_045393	100503117	Mm.250517	NR_045393		2010010A06Rik	5033420E22Rik	RIKEN cDNA 2010010A06 gene	ncRNA
common_peak1-13358-17-9-0.896368243317676-1.09394599973099	chr19	45363830	45364509	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-54443	NM_010691	16814	Mm.116815	NM_010691		Lbx1	Lbx1h	ladybird homeobox homolog 1 (Drosophila)	protein-coding
common_peak1-19235-8-10--0.454209200689727-1.078512453669	chr9	108347720	108348212	+	0	NA	intron (NM_001004192, intron 3 of 3)	intron (NM_001004192, intron 3 of 3)	9153	NM_001004192	434439	Mm.78372	NM_001004192	ENSMUSG00000050641	BC048562	-	cDNA sequence BC048562	protein-coding
common_peak1-8540-8-13--0.802132504110034-0.562038191119711	chr10	91182282	91182788	+	0	NA	Intergenic	Intergenic	352395	NR_029812	723955		NR_029812	miRBase:MI0000715	Mir135a-2	Mirn135a-2	microRNA 135a-2	ncRNA
common_peak1-14252-33-33-0.24387472127519-0.447010559430123	chr2	155133403	155134339	+	0	NA	intron (NM_001004721, intron 7 of 11)	intron (NM_001004721, intron 7 of 11)	31771	NR_046364	66734	Mm.196239	NM_025735	ENSMUSG00000027602	Map1lc3a	1010001H21Rik|4922501H04Rik|LC3|LC3a	microtubule-associated protein 1 light chain 3 alpha	protein-coding
unique_peak2-36297-9-15--0.81038659359578-0.630231561310125	chr2	71801227	71801924	+	0	NA	Intergenic	Intergenic	-17697	NM_001204167	56508	Mm.196153	NM_019688	ENSMUSG00000049044	Rapgef4	1300003D15Rik|5730402K07Rik|6330581N18Rik|EPAC 2|Epac-2|Epac2|mKIAA4040	Rap guanine nucleotide exchange factor (GEF) 4	protein-coding
common_peak1-8646-20-42--0.938189970110905-1.68120055799038	chr10	126978861	126979714	+	0	NA	exon (NM_008512, exon 79 of 89)	exon (NM_008512, exon 79 of 89)	-7672	NM_183297	104080	Mm.437200	NM_183297	ENSMUSG00000040258	Nxph4	1110036M10Rik|AI851051	neurexophilin 4	protein-coding
common_peak1-11776-8-14--0.901668177660948-0.660903317613906	chr16	45158787	45159313	+	0	NA	promoter-TSS (NM_028756)	promoter-TSS (NM_028756)	108	NM_026402	67841	Mm.41775	NM_026402	ENSMUSG00000022663	Atg3	2610016C12Rik|APG3|Apg3l|Atg3l|PC3-96	autophagy related 3	protein-coding
common_peak1-7691-14-9-0.577288065470282-0.630231561310125	chr1	82785826	82786661	+	0	NA	Intergenic	(CAAAAA)n|Simple_repeat|Simple_repeat	-21212	NM_025453	66261	Mm.46325	NM_025453	ENSMUSG00000026149	Tm4sf20	1810018L02Rik	transmembrane 4 L six family member 20	protein-coding
common_peak1-10631-10-10--0.103016273628528-0.301029995663987	chr14	41018353	41018862	+	0	NA	Intergenic	L1Md_F2|LINE|L1	549656	NR_045936	73591	Mm.65499	NR_045936		1700109I08Rik	-	RIKEN cDNA 1700109I08 gene	ncRNA
common_peak1-13987-9-13--0.617741515653384-0.459837087125828	chr2	103073648	103074202	+	0	NA	Intergenic	L1MEc|LINE|L1	69428	NM_007914	13661	Mm.10724	NM_007914	ENSMUSG00000012350	Ehf	9030625L19Rik|AU019492	ets homologous factor	protein-coding
common_peak1-14233-10-7-0.356415345008769-1.12966497611638	chr2	152827435	152827961	+	0	NA	intron (NM_001083618, intron 12 of 14)	intron (NM_001083618, intron 12 of 14)	13421	NM_178939	68559	Mm.12746	NM_178939	ENSMUSG00000027472	Pdrg1	1110004D19Rik|AU020945|AV006589|Pdrg	p53 and DNA damage regulated 1	protein-coding
common_peak2-23904-12-17--0.521149016354673-0.417187467413082	chr16	4684064	4684609	+	0	NA	exon (NM_023646, exon 1 of 12)	exon (NM_023646, exon 1 of 12)	266	NM_001135112	83945	Mm.248337	NM_023646	ENSMUSG00000004069	Dnaja3	1200003J13Rik|1810053A11Rik|C81173|Tid-1|Tid1l	DnaJ (Hsp40) homolog, subfamily A, member 3	protein-coding
unique_peak1-1196-18-10-0.853487532591054-1.03889213727317	chr11	103140297	103141192	+	0	NA	Intergenic	Intergenic	-12029	NM_016896	53859	Mm.158981	NM_016896	ENSMUSG00000020941	Map3k14	Nik|aly	mitogen-activated protein kinase kinase kinase 14	protein-coding
common_peak1-18123-13-7-0.778472030637769-0.817533494790411	chr8	7908442	7909158	+	0	NA	Intergenic	Intergenic	751973	NM_010111	13642	Mm.209813	NM_010111	ENSMUSG00000001300	Efnb2	ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1	ephrin B2	protein-coding
common_peak1-18314-39-72--0.574063311960864-1.25617732716374	chr8	47713497	47715018	+	0	NA	intron (NM_001284409, intron 1 of 6)	intron (NM_001284409, intron 1 of 6)	11612	NM_009810	12367	Mm.34405	NM_009810		Casp3	A830040C14Rik|AC-3|Apopain|CASP-3|CC3|CPP-32|CPP32|Caspase-3|Lice|SCA-1|Yama|mldy	caspase 3	protein-coding
common_peak1-15684-17-35--0.951628663237274-1.34608670144205	chr4	138325628	138326370	+	0	NA	Intergenic	Intergenic	-5651	NM_011109	18782	Mm.71913	NM_011109	ENSMUSG00000041202	Pla2g2d	Splash|mGIID	phospholipase A2, group IID	protein-coding
unique_peak1-2850-7-1-1.79909083029819-1.80617997398389	chr17	31793780	31794293	+	0	NA	intron (NM_024187, intron 1 of 7)	B1_Mus1|SINE|Alu	1663	NM_024187	108121	Mm.379289	NM_024187	ENSMUSG00000061613	U2af1	2010107D16Rik|35kDa	U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 1	protein-coding
common_peak2-22374-9-8-0.0196884049619079-1.03275496310833	chr13	29985179	29985640	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-37952	NM_144536	68916	Mm.212227	NM_144536	ENSMUSG00000006191	Cdkal1	1190005B03Rik|6620401C13Rik	CDK5 regulatory subunit associated protein 1-like 1	protein-coding
common_peak1-12155-20-27--0.319280137466411-0.412012472183092	chr17	28512320	28513161	+	0	NA	Intergenic	Intergenic	-10652	NM_021478	22157	Mm.42102	NM_021478	ENSMUSG00000037446	Tulp1	Tulp1l	tubby like protein 1	protein-coding
unique_peak1-4839-12-7-0.648775985087639-0.697979855752659	chr3	152131326	152131990	+	0	NA	intron (NM_001081277, intron 13 of 13)	intron (NM_001081277, intron 13 of 13)	72010	NM_001287139	108946	Mm.379292	NM_198416	ENSMUSG00000039068	Zzz3	3110065C23Rik|6430567E01Rik|AA408566|AI481057|AW556059|R75514	zinc finger, ZZ domain containing 3	protein-coding
common_peak1-14747-34-57--0.475912468126306-0.796452271284518	chr3	87616870	87618062	+	0	NA	intron (NM_011832, intron 17 of 21)	intron (NM_011832, intron 17 of 21)	16593	NM_011832	23920	Mm.42041	NM_011832	ENSMUSG00000005640	Insrr	Irr	insulin receptor-related receptor	protein-coding
common_peak2-21532-57-75-0.0181055266353436-0.306744561642298	chr11	95309703	95311058	+	0	NA	intron (NM_025287, intron 2 of 10)	intron (NM_025287, intron 2 of 10)	34983	NM_025287	20747	Mm.285454	NM_025287	ENSMUSG00000057522	Spop	AI315626|Pcif1|TEF2	speckle-type POZ protein	protein-coding
common_peak2-31302-13-12-0.0780323124966764-0.334470287753051	chr8	75089062	75089700	+	0	NA	3' UTR (NM_172396, exon 5 of 5)	3' UTR (NM_172396, exon 5 of 5)	5566	NM_172396	66818	Mm.22565	NM_172396	ENSMUSG00000044600	Smim7	9130011J15Rik	small integral membrane protein 7	protein-coding
common_peak1-10568-17-25--0.482143379936054-0.479250674391597	chr14	21500683	21501334	+	0	NA	intron (NM_001168273, intron 3 of 23)	B2_Mm2|SINE|B2	7465	NM_001168273	218811	Mm.173119	NM_172596	ENSMUSG00000039367	Sec24c	2610204K03Rik|mKIAA0079	Sec24 related gene family, member C (S. cerevisiae)	protein-coding
unique_peak2-35002-5-6--0.511735258063458-0.947717972411649	chr15	99853498	99853878	+	0	NA	Intergenic	RLTR4_MM-int|LTR|ERV1	-15407	NM_001159361	239667	Mm.243658	NM_172819	ENSMUSG00000023026	Dip2b	4932422C22|AI317237|AI854602|mKIAA1463	DIP2 disco-interacting protein 2 homolog B (Drosophila)	protein-coding
common_peak2-31063-46-67--0.189466898001537-0.38485368755706	chr8	22192759	22193749	+	0	NA	Intergenic	L1Md_F|LINE|L1	-1465	NM_001012307	497114	Mm.425522	NM_001012307	ENSMUSG00000074446	Defa23	Defcr23	defensin, alpha, 23	protein-coding
unique_peak1-6530-11-1-2.50869358425161-2.83420869758413	chr7	123105228	123105855	+	0	NA	intron (NM_001025559, intron 1 of 15)	intron (NM_001025559, intron 1 of 15)	33059	NM_011445	20679	Mm.323365	NM_011445	ENSMUSG00000051910	Sox6	AI987981|SOX-LZ	SRY (sex determining region Y)-box 6	protein-coding
unique_peak1-260-7-0-2.79909083029819-2.40823996531185	chr1	92378509	92378931	+	0	NA	Intergenic	Intergenic	-121280	NM_133805	108679	Mm.119177	NM_133805	ENSMUSG00000034432	Cops8	9430009J09Rik|AA408242|Csn8|Sgn8	COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)	protein-coding
unique_peak2-39773-1-5--2.2120195109379-1.32905871926422	chrX	7697179	7697581	+	0	NA	Intergenic	LTRIS_Mus|LTR|ERV1	12604	NM_001290783	73447	Mm.284162	NM_026137	ENSMUSG00000031166	Wdr13	1700060B08Rik|5730411P10Rik|DXHXS7467e|W51679|mMg21	WD repeat domain 13	protein-coding
common_peak1-11708-9-9--0.132314688483142-1.03275496310833	chr16	32246120	32246621	+	0	NA	promoter-TSS (NM_001185162)	promoter-TSS (NM_001185162)	741	NM_173439	268882	Mm.256137	NM_173439	ENSMUSG00000035764	Fbxo45	2610017J04Rik|AI463119|BC026799	F-box protein 45	protein-coding
unique_peak2-39058-2-8--2.08737925770563-1.65811743852845	chr8	70897760	70898286	+	0	NA	intron (NM_172753, intron 6 of 9)	B3A|SINE|B2	5665	NR_038181	73609	Mm.443247	NR_038181	ENSMUSG00000085197	1700125H03Rik	4930510D22Rik	RIKEN cDNA 1700125H03 gene	ncRNA
common_peak1-11733-18-20--0.0793982715504091-0.301029995663976	chr16	33594887	33595687	+	0	NA	intron (NM_134251, intron 5 of 12)	intron (NM_134251, intron 5 of 12)	76606	NM_001083902	171286	Mm.35253	NM_134251	ENSMUSG00000035506	Slc12a8	CCC9|E330020C02Rik	solute carrier family 12 (potassium/chloride transporters), member 8	protein-coding
common_peak2-28416-30-23-0.584712908770717-0.92816130897933	chr4	141565187	141566079	+	0	NA	intron (NM_177868, intron 1 of 31)	intron (NM_177868, intron 1 of 31)	1933	NM_177868	329977	Mm.252019	NM_028429	ENSMUSG00000051435	Fhad1	2900090M10Rik|B230311F11	forkhead-associated (FHA) phosphopeptide binding domain 1	protein-coding
common_peak2-30561-21-23--0.0154732354549205-0.305650498375555	chr7	79147940	79149016	+	0	NA	Intergenic	Intergenic	303003	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding
common_peak2-21567-9-7-0.18961340640422-1.05908390183068	chr11	97436148	97436611	+	0	NA	promoter-TSS (NM_018873)	promoter-TSS (NM_018873)	61	NM_018873	56013	Mm.342665	NM_018873	ENSMUSG00000038453	Srcin1	P140|SNIP|mKIAA1684|p140Cap	SRC kinase signaling inhibitor 1	protein-coding
unique_peak1-4417-8-0-3.00522241794757-2.70926996097583	chr2	167778974	167779486	+	0	NA	intron (NM_011201, intron 1 of 8)	intron (NM_011201, intron 1 of 8)	21403	NM_011201	19246	Mm.277916	NM_011201	ENSMUSG00000027540	Ptpn1	PTP-1B|PTP-HA2|PTP1B	protein tyrosine phosphatase, non-receptor type 1	protein-coding
common_peak1-17550-19-24--0.241168863113038-0.344491671143527	chr7	29981044	29981929	+	0	NA	intron (NM_001164658, intron 13 of 27)	intron (NM_001164658, intron 13 of 27)	-15794	NM_026545	57296	Mm.273152	NM_026545	ENSMUSG00000030591	Psmd8	6720456J22Rik|AA407360|AL033291|AL033322|AL033323|C76433	proteasome (prosome, macropain) 26S subunit, non-ATPase, 8	protein-coding
unique_peak1-3664-8-2-1.42025991722641-1.65811743852845	chr19	40356191	40356714	+	0	NA	Intergenic	RLTR25A|LTR|ERVK	-10346	NM_016861	54132	Mm.5567	NM_016861		Pdlim1	Clim1|mClim1	PDZ and LIM domain 1 (elfin)	protein-coding
common_peak2-27085-47-78--0.368939323410555-0.753641103152394	chr3	90536817	90538471	+	0	NA	intron (NM_207263, intron 5 of 7)	B3|SINE|B2	6816	NM_207263	384997	Mm.316644	NM_207263	ENSMUSG00000042250	Pglyrp4	Gm1478|Gm413	peptidoglycan recognition protein 4	protein-coding
unique_peak2-32713-6-5--0.0195643903408542-0.947717972411649	chr1	153987074	153987439	+	0	NA	Intergenic	Intergenic	-49806	NM_197990	69399	Mm.278031	NM_197990	ENSMUSG00000032666	1700025G04Rik	2610510E02Rik|2900042O04Rik|ENSMUSG00000073540	RIKEN cDNA 1700025G04 gene	protein-coding
common_peak2-24543-18-8-1.14299414978604-1.45476480588849	chr17	27800219	27800572	+	0	NA	intron (NM_001286744, intron 1 of 9)	B2_Mm1a|SINE|B2	7859	NM_001286743	23969	Mm.4926	NM_011861	ENSMUSG00000040276	Pacsin1	A830061D09Rik|H74|mKIAA1379|syndapin	protein kinase C and casein kinase substrate in neurons 1	protein-coding
common_peak2-19804-10-6-0.549060422951165-1.21398586181642	chr1	88134320	88134733	+	0	NA	intron (NM_030184, intron 19 of 24)	intron (NM_030184, intron 19 of 24)	-65270	NM_145222	227327	Mm.86467	NM_145222	ENSMUSG00000079445	B3gnt7	C330001H22Rik|beta-3GnT7	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7	protein-coding
common_peak2-20264-35-35-0.261445257020192-0.479515789778899	chr1	189006924	189007974	+	0	NA	intron (NM_029067, intron 3 of 6)	intron (NM_029067, intron 3 of 6)	31876	NM_029067	74717	Mm.250430	NM_028848	ENSMUSG00000026611	Spata17	1700065F16Rik|4930504I07Rik|4930513F16Rik|MSRG-11	spermatogenesis associated 17	protein-coding
common_peak2-19951-117-191--0.075938645573193-0.348189871288004	chr1	132007231	132008763	+	0	NA	intron (NM_172485, intron 16 of 27)	L1Md_F2|LINE|L1	311579	NM_007827	13137	Mm.436759	NM_007827	ENSMUSG00000026401	Daf2	AI323748|Cd55b|Daf|Daf-TM|TM-DAF	decay accelerating factor 2	protein-coding
common_peak1-19259-91-136--0.0246001373581883-0.301831278814359	chr9	110879409	110882062	+	0	NA	intron (NM_028838, intron 6 of 8)	intron (NM_028838, intron 6 of 8)	11482	NM_153100	235636	Mm.441138	NM_153100		Rtp3	Tmem7	receptor transporter protein 3	protein-coding
common_peak2-22296-7-7--0.200909169701811-0.97990265578305	chr13	16847637	16847999	+	0	NA	Intergenic	Intergenic	741510	NM_008380	16323	Mm.8042	NM_008380	ENSMUSG00000041324	Inhba	-	inhibin beta-A	protein-coding
common_peak2-31557-36-51--0.221118631973337-0.382513308492835	chr8	116921121	116921942	+	0	NA	Intergenic	MMERVK10C-int|LTR|ERVK	-20403	NM_001007223	403395	Mm.81117	NM_001007223		Clec3a	1110019O10Rik|Clecsf1|Gm796	C-type lectin domain family 3, member a	protein-coding
common_peak1-14629-9-12--0.510826311736872-0.394412252720706	chr3	54755491	54756023	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-35948	NM_177854	329641	Mm.51187	NM_177854	ENSMUSG00000056306	Sertm1	6030405A18Rik	serine rich and transmembrane domain containing 1	protein-coding
common_peak1-17941-27-29-0.0846553552867171-0.333081040816753	chr7	127448485	127449232	+	0	NA	intron (NM_026458, intron 24 of 30)	L1Md_F2|LINE|L1	-23340	NM_177213	320631	Mm.78330	NM_177213	ENSMUSG00000054746	Abca15	4930500I12Rik	ATP-binding cassette, sub-family A (ABC1), member 15	protein-coding
unique_peak1-2261-7-3-0.799090830298189-1.23214870625617	chr15	77886151	77886718	+	0	NA	intron (NM_007583, intron 1 of 3)	intron (NM_007583, intron 1 of 3)	63276	NM_007583	12300	Mm.277338	NM_007583		Cacng2	AW060990|B230105C07Rik|B930041E13Rik|stargazer|stargazin|stg|wag|waggler	calcium channel, voltage-dependent, gamma subunit 2	protein-coding
common_peak1-12020-7-4-0.477162735410827-1.09384600808989	chr17	15526805	15527157	+	0	NA	Intergenic	Intergenic	-6185	NR_033586	67544	Mm.35039	NM_024203	ENSMUSG00000014763	Fam120b	4932442K08Rik|AW049283|AW413338|CCPG|Pgcc1|mKIAA1838	family with sequence similarity 120, member B	protein-coding
unique_peak2-35139-2-6--1.72480917832092-1.26211192963361	chr16	30776024	30776360	+	0	NA	Intergenic	Intergenic	176383	NM_177632	224093	Mm.28244	NM_177632	ENSMUSG00000046546	Fam43a	Tuf1	family with sequence similarity 43, member A	protein-coding
common_peak2-25023-14-30--1.05498015002923-1.40782320807776	chr18	24121612	24122389	+	0	NA	3' UTR (NM_027007, exon 4 of 4)	3' UTR (NM_027007, exon 4 of 4)	8811	NM_027007	69256	Mm.218343	NM_027007	ENSMUSG00000024276	Zfp397	2810411K16Rik|6720480F11Rik|AI461664	zinc finger protein 397	protein-coding
unique_peak2-39612-6-7--0.434601889619698-0.97990265578305	chr9	86571332	86571779	+	0	NA	intron (NM_008615, intron 3 of 13)	intron (NM_008615, intron 3 of 13)	9651	NM_001198933	17436	Mm.148155	NM_008615	ENSMUSG00000032418	Me1	D9Ertd267e|Mdh-1|Mod-1|Mod1	malic enzyme 1, NADP(+)-dependent, cytosolic	protein-coding
unique_peak2-33546-11-7-0.508693584251613-1.21681515183528	chr11	78984357	78984896	+	0	NA	Intergenic	B1F1|SINE|Alu	-24770	NM_013571	16706	Mm.4745	NM_013571	ENSMUSG00000018334	Ksr1	AW492498|B-KSR1|D11Bhm183e|D11Bhm184e|Ksr|RSU2|hb	kinase suppressor of ras 1	protein-coding
unique_peak1-4256-6-0-2.5653981103803-2.10720996964787	chr2	129749970	129750445	+	0	NA	Intergenic	Intergenic	-87869	NM_009374	21818	Mm.2961	NM_009374	ENSMUSG00000027401	Tgm3	AI893889|TG E|TG(E)|TGE|TGase E|TGase-3	transglutaminase 3, E polypeptide	protein-coding
unique_peak1-7142-9-5-0.604650905683064-1.21398586181642	chr9	56865087	56865561	+	0	NA	intron (NM_019651, intron 1 of 12)	intron (NM_019651, intron 1 of 12)	22549	NM_019651	56294	Mm.325643	NM_019651	ENSMUSG00000032290	Ptpn9	MEG2	protein tyrosine phosphatase, non-receptor type 9	protein-coding
common_peak1-13452-47-13-2.12748650270894-7.640485930352	chr19	57600075	57601442	+	0	NA	Intergenic	Intergenic	17202	NR_040307	78073	Mm.12411	NR_040306		6720468P15Rik	-	RIKEN cDNA 6720468P15 gene	ncRNA
unique_peak2-35203-4-9--1.34538860874061-1.36011389749466	chr16	84734819	84735322	+	0	NA	intron (NM_017404, intron 1 of 9)	intron (NM_017404, intron 1 of 9)	477	NM_017404	27393	Mm.103655	NM_017404	ENSMUSG00000022889	Mrpl39	C21orf8|MRP-L5|ORF22|Rpml5	mitochondrial ribosomal protein L39	protein-coding
common_peak2-22802-17-10-0.75886471956774-0.917676348953458	chr14	8665945	8666416	+	0	NA	intron (NM_134080, intron 1 of 45)	MER113|DNA|MER1_type	15709	NM_134080	286940	Mm.489652	NM_134080	ENSMUSG00000025278	Flnb	AL024016|Fln-b	filamin, beta	protein-coding
common_peak2-28539-7-6--0.00826409175941478-0.97990265578305	chr5	3299823	3300203	+	0	NA	Intergenic	Intergenic	-44299	NM_009873	12571	Mm.31672	NM_009873	ENSMUSG00000040274	Cdk6	5830411I20|AI504062|Crk2	cyclin-dependent kinase 6	protein-coding
common_peak2-31645-32-53--0.475795482943808-0.765450243834444	chr8	124862624	124863715	+	0	NA	Intergenic	Intergenic	21477	NM_133202	170732	Mm.154808	NM_133202	ENSMUSG00000039079	Trhr2	TRH-R2	thyrotropin releasing hormone receptor 2	protein-coding
common_peak1-15409-34-14-1.47517793139275-3.48244293670685	chr4	86671842	86673260	+	0	NA	intron (NM_172426, intron 7 of 10)	(GGA)n|Simple_repeat|Simple_repeat	152233	NM_139306	230379	Mm.45019	NM_139306	ENSMUSG00000038007	Acer2	2410116I05Rik|Asah3l|CRG-L1|maCER2	alkaline ceramidase 2	protein-coding
common_peak2-29914-34-91--1.14149342905575-4.31498806828239	chr6	115360669	115362449	+	0	NA	intron (NM_001127330, intron 2 of 7)	intron (NM_001127330, intron 2 of 7)	-10525	NM_011146	19016	Mm.3020	NM_011146	ENSMUSG00000000440	Pparg	Nr1c3|PPAR-gamma|PPAR-gamma2|PPARgamma|PPARgamma2	peroxisome proliferator activated receptor gamma	protein-coding
common_peak1-14276-39-32-0.5713671275607-1.08158034290997	chr2	156546963	156547993	+	0	NA	promoter-TSS (NR_040505)	promoter-TSS (NR_040505)	463	NM_001042487	228836	Mm.22094	NM_146128	ENSMUSG00000061689	Dlgap4	AI225853|BC024558|DAP-4|DAP4|SAPAP-4|Sapap4|WBP16	discs, large homolog-associated protein 4 (Drosophila)	protein-coding
common_peak1-16980-9-15--0.81038659359578-0.630231561310125	chr6	87009920	87010378	+	0	NA	intron (NM_013528, intron 7 of 18)	intron (NM_013528, intron 7 of 18)	17309	NM_013528	14583	Mm.19893	NM_013528	ENSMUSG00000029992	Gfpt1	2810423A18Rik|AI324119|AI449986|GFA|GFAT|GFAT1|GFAT1m|Gfpt	glutamine fructose-6-phosphate transaminase 1	protein-coding
unique_peak2-33356-10-16--0.73104749624157-0.604422558181019	chr11	31718085	31719051	+	0	NA	non-coding (NR_102310, exon 3 of 4)	non-coding (NR_102310, exon 3 of 4)	5979	NR_102310	414116	Mm.150222	NR_102310	ENSMUSG00000085772	D630024D03Rik	-	RIKEN cDNA D630024D03 gene	ncRNA
unique_peak1-5264-9-1-2.18961340640422-2.31132995230379	chr5	64423274	64423773	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-12689	NR_045384	74757	Mm.159329	NR_045384		5830416I19Rik	-	RIKEN cDNA 5830416I19 gene	ncRNA
unique_peak2-38662-1-8--2.79698201165906-2.05605744720049	chr7	98140354	98140847	+	0	NA	Intergenic	L1_Mur2|LINE|L1	-98696	NM_011807	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
unique_peak2-34808-9-8-0.0196884049619079-1.03275496310833	chr15	73431875	73432377	+	0	NA	intron (NM_001033219, intron 2 of 7)	intron (NM_001033219, intron 2 of 7)	-5170	NM_001168255	106068	Mm.212813	NM_001033219	ENSMUSG00000079020	Slc45a4	9330175B01Rik|AW552276	solute carrier family 45, member 4	protein-coding
unique_peak1-5603-16-4-1.7963355473807-2.18192634393779	chr6	87866829	87867666	+	0	NA	intron (NM_173737, intron 2 of 6)	B1_Mus1|SINE|Alu	3277	NM_173737	232210	Mm.246241	NM_173737	ENSMUSG00000030060	Hmces	8430410A17Rik|C85376	5-hydroxymethylcytosine (hmC) binding, ES cell specific	protein-coding
common_peak2-29308-12-45--1.87478597096937-4.35777281740386	chr5	145205196	145206070	+	0	NA	Intergenic	RMER15|LTR|ERVL	86239	NR_102373	100579137		NR_102372		Dmr	-	Dmrt1 related	ncRNA
common_peak1-11672-25-12-1.16141018720401-1.87883858401928	chr16	25485160	25486081	+	0	NA	Intergenic	Intergenic	-198231	NM_001127259	22061	Mm.20894	NM_011641	ENSMUSG00000022510	Trp63	AI462811|Ket|P51/P63|P63|P73l|Tp63|Trp53rp1	transformation related protein 63	protein-coding
common_peak1-10275-32-25-0.578652301078568-0.97145127402441	chr13	58273467	58274870	+	0	NA	Intergenic	Intergenic	15158	NM_198004	75731	Mm.293919	NM_198004	ENSMUSG00000050002	Idnk	5133401N09Rik	idnK gluconokinase homolog (E. coli)	protein-coding
common_peak1-15805-18-35--0.857005850213961-1.20071330053878	chr5	8798038	8798861	+	0	NA	intron (NM_011075, intron 1 of 27)	CpG	302	NM_011075	18669	Mm.146649	NM_011075	ENSMUSG00000028970	Abcb1b	Abcb1|Mdr1|Mdr1b|Pgy-1|Pgy1|mdr	ATP-binding cassette, sub-family B (MDR/TAP), member 1B	protein-coding
unique_peak1-399-11-3-1.50869358425161-1.95434855131066	chr1	155040980	155041525	+	0	NA	Intergenic	Intergenic	-7675	NM_008485	16782	Mm.329272	NM_008485	ENSMUSG00000026479	Lamc2	AA589349	laminin, gamma 2	protein-coding
common_peak2-26874-20-17-0.318149783148881-0.440610794044987	chr2	156295393	156296345	+	0	NA	intron (NM_001291121, intron 2 of 21)	intron (NM_001291121, intron 2 of 21)	-5401	NM_001006664	13821	Mm.20852	NM_013510	ENSMUSG00000027624	Epb4.1l1	4.1N|Epb41l1|NBL1|mKIAA0338	erythrocyte protein band 4.1-like 1	protein-coding
common_peak1-9016-20-45--1.03548717146582-2.05089002217436	chr11	61174391	61175191	+	0	NA	intron (NM_026183, intron 10 of 16)	intron (NM_026183, intron 10 of 16)	16786	NM_026183	67473	Mm.100741	NM_026183	ENSMUSG00000010122	Slc47a1	1300013J15Rik|AI036982|MATE1|mMATE1	solute carrier family 47, member 1	protein-coding
common_peak1-15025-23-43--0.737664114128217-1.21996307277154	chr3	117868419	117869649	+	0	NA	Intergenic	Intergenic	-267741	NR_029551	387155		NR_029551		Mir137	Mirn137|mmu-mir-137	microRNA 137	ncRNA
unique_peak2-39668-0-6--3.64748585253182-1.56314192529759	chr9	107702556	107702936	+	0	NA	intron (NM_029169, intron 7 of 20)	B1_Mur4|SINE|Alu	-29413	NM_148930	83486	Mm.259197	NM_148930	ENSMUSG00000032580	Rbm5	D030069N10Rik	RNA binding motif protein 5	protein-coding
common_peak1-17586-10-12--0.344024373132323-0.340565874754526	chr7	41498849	41499375	+	0	NA	Intergenic	Intergenic	-2185900	NM_001013810	434171	Mm.60990	NM_001013810	ENSMUSG00000060565	Gm5591	EG434171	predicted gene 5591	protein-coding
unique_peak1-1830-8-5-0.420259917226415-1.10484139239135	chr14	37164723	37165248	+	0	NA	Intergenic	Intergenic	256834	NM_175008	218921	Mm.212464	NM_175008	ENSMUSG00000096405	4930474N05Rik	-	RIKEN cDNA 4930474N05 gene	protein-coding
common_peak2-22955-29-48--0.502419763500098-0.744998914848106	chr14	52013798	52015119	+	0	NA	Intergenic	L1Md_F3|LINE|L1	-16218	NM_011686	669149	Mm.377117	NM_011686	ENSMUSG00000000606	Vmn2r88	V2r13|V2r3	vomeronasal 2, receptor 88	protein-coding
unique_peak2-32529-1-9--2.94898510510411-2.31132995230379	chr1	62768097	62768537	+	0	NA	intron (NM_001077403, intron 2 of 16)	intron (NM_001077403, intron 2 of 16)	18426	NM_001077405	18187	Mm.266341	NM_010939	ENSMUSG00000025969	Nrp2	1110048P06Rik|Np-2|Np2|Npn-2|Npn2	neuropilin 2	protein-coding
common_peak1-13316-169-131-1.10361385978804-12.8434663649617	chr19	42129097	42132176	+	0	NA	intron (NM_026152, intron 1 of 6)	intron (NM_026152, intron 1 of 6)	3918	NM_025752	66765	Mm.440412	NM_025752	ENSMUSG00000090369	4933411K16Rik	-	RIKEN cDNA 4933411K16 gene	protein-coding
common_peak2-29386-22-20-0.254966682308644-0.421916810733237	chr6	39419628	39420313	+	0	NA	intron (NM_172477, intron 14 of 18)	intron (NM_172477, intron 14 of 18)	-49602	NM_018810	54484	Mm.270484	NM_018810	ENSMUSG00000029922	Mkrn1	RFP	makorin, ring finger protein, 1	protein-coding
unique_peak1-6149-13-5-1.19350952991661-1.95509489018123	chr6	135332565	135333158	+	0	NA	3' UTR (NM_010128, exon 5 of 5)	3' UTR (NM_010128, exon 5 of 5)	15350	NM_001288627	13730	Mm.182785	NM_010128	ENSMUSG00000030208	Emp1	I-8-09|TMP	epithelial membrane protein 1	protein-coding
common_peak2-21609-28-40--0.304592884796621-0.447010559430123	chr11	100144709	100146047	+	0	NA	Intergenic	Intergenic	-14193	NM_212483	68239	Mm.158190	NM_212483	ENSMUSG00000053654	Krt42	2410039E07Rik|K17n|Ka22|ecat6	keratin 42	protein-coding
unique_peak2-39657-9-14--0.717277189204299-0.53895475198017	chr9	107289039	107289793	+	0	NA	Intergenic	MLT1I|LTR|MaLR	-12795	NM_001174049	56808	Mm.273084	NM_020263	ENSMUSG00000010066	Cacna2d2	Cacna2d|a2d2|du|mKIAA0558|td|torpid	calcium channel, voltage-dependent, alpha 2/delta subunit 2	protein-coding
common_peak2-24556-24-28--0.0647710923598552-0.301029995663979	chr17	28512135	28513222	+	0	NA	Intergenic	Intergenic	-10590	NM_021478	22157	Mm.42102	NM_021478	ENSMUSG00000037446	Tulp1	Tulp1l	tubby like protein 1	protein-coding
common_peak2-24569-55-84--0.204771064985-0.43855686106456	chr17	29450640	29451509	+	0	NA	Intergenic	Lx3B|LINE|L1	-4753	NM_023734	74116	Mm.30950	NM_023734	ENSMUSG00000024011	Pi16	1200009H11Rik|Cripi|PI-16	peptidase inhibitor 16	protein-coding
unique_peak2-35027-6-6--0.241956811677302-0.947717972411649	chr15	102721793	102722100	+	0	NA	Intergenic	Intergenic	-29616	NM_010464	15422	Mm.207062	NM_010464	ENSMUSG00000001655	Hoxc13	-	homeobox C13	protein-coding
common_peak2-26838-25-41--0.530467517433655-0.749946955723563	chr2	153240644	153241810	+	0	NA	intron (NM_001001986, intron 7 of 7)	intron (NM_001001986, intron 7 of 7)	28988	NM_001001986	329540	Mm.50600	NM_001001986	ENSMUSG00000061411	Nol4l	4931410H15|8430427H17Rik|AI429157|Gm1636	nucleolar protein 4-like	protein-coding
unique_peak2-38920-5-5--0.289342836727009-0.909929411522249	chr8	18724469	18724893	+	0	NA	intron (NM_007426, intron 1 of 8)	intron (NM_007426, intron 1 of 8)	16881	NM_007426	11601	Mm.439874	NM_007426	ENSMUSG00000031465	Angpt2	Agpt2|Ang-2|Ang2	angiopoietin 2	protein-coding
common_peak1-13280-28-7-2.05295911982146-4.28647646517482	chr19	37885764	37886826	+	0	NA	Intergenic	B4A|SINE|B4	113997	NM_007811	13082	Mm.42230	NM_007811	ENSMUSG00000024987	Cyp26a1	Cyp26|P450RA|P450RAI|RAH	cytochrome P450, family 26, subfamily a, polypeptide 1	protein-coding
common_peak2-29299-11-5-0.923731083530457-1.477227296591	chr5	144953865	144954239	+	0	NA	3' UTR (NM_010800, exon 2 of 2)	3' UTR (NM_010800, exon 2 of 2)	2897	NM_010800	17341	Mm.386767	NM_010800	ENSMUSG00000052271	Bhlha15	1810009C13Rik|Bhlhb8|MIST-1|Mist1	basic helix-loop-helix family, member a15	protein-coding
unique_peak2-34054-2-11--2.50241675698448-2.32232533660526	chr12	117533737	117534282	+	0	NA	intron (NM_028731, intron 1 of 21)	B1_Mus1|SINE|Alu	14314	NM_028731	52635	Mm.273755	NM_028731	ENSMUSG00000021171	Esyt2	2410017M09Rik|4921504I16Rik|CHR2SYT|D12Ertd551e|Fam62b	extended synaptotagmin-like protein 2	protein-coding
common_peak1-12876-30-49--0.474180780282851-0.734468890407008	chr18	76943828	76944556	+	0	NA	Intergenic	MIR3|SINE|MIR	-150952	NM_001109743	664805	Mm.329543	NM_001109743	ENSMUSG00000091519	Skor2	Corl2|EG664805|Fussel18|Gm7348	SKI family transcriptional corepressor 2	protein-coding
common_peak2-25369-38-24-0.927596469523806-2.07189913552604	chr18	82736901	82738118	+	0	NA	intron (NM_001025256, intron 2 of 5)	intron (NM_001025256, intron 2 of 5)	13609	NM_001025254	17196	Mm.252063	NM_010777	ENSMUSG00000041607	Mbp	C76307|Hmbpr|R75289|golli-mbp|mld|shi	myelin basic protein	protein-coding
unique_peak2-38454-4-5--0.608423014574403-0.909929411522249	chr7	28436694	28437027	+	0	NA	Intergenic	Intergenic	-2083	NM_028417	73032	Mm.44095	NM_028417	ENSMUSG00000007944	Ttc9b	2900074C18Rik	tetratricopeptide repeat domain 9B	protein-coding
common_peak2-22761-12-15--0.351224014912361-0.332077462497413	chr13	116619469	116619996	+	0	NA	Intergenic	GA-rich|Low_complexity|Low_complexity	480164	NM_021459	16392	Mm.42242	NM_021459	ENSMUSG00000042258	Isl1	-	ISL1 transcription factor, LIM/homeodomain	protein-coding
unique_peak2-38151-5-5--0.289342836727009-0.909929411522249	chr6	86081746	86082146	+	0	NA	Intergenic	Intergenic	53904	NM_001271859	11519	Mm.104155	NM_013458		Add2	2900072M03Rik|add97	adducin 2 (beta)	protein-coding
common_peak2-25413-88-130--0.0180105923669176-0.301868404082872	chr19	53312376	53314266	+	0	NA	intron (NM_001164101, intron 11 of 13)	RMER4B|LTR|ERVK	16374	NR_036590	69319	Mm.57452	NR_036590		1700001K23Rik	-	RIKEN cDNA 1700001K23 gene	ncRNA
common_peak1-18144-33-53--0.423549939637939-0.696926118858569	chr8	11311681	11313213	+	0	NA	promoter-TSS (NM_009932)	promoter-TSS (NM_009932)	379	NM_009931	12826	Mm.738	NM_009931	ENSMUSG00000031502	Col4a1	Bru|Col4a-1|Del(8)44H|Raw|Svc	collagen, type IV, alpha 1	protein-coding
common_peak2-23612-11-13--0.298661337805991-0.337263207250336	chr15	81729345	81729937	+	0	NA	exon (NM_080633, exon 4 of 18)	exon (NM_080633, exon 4 of 18)	26748	NM_080633	11429	Mm.154581	NM_080633	ENSMUSG00000022477	Aco2	Aco-2|Aco3|D10Wsu183e	aconitase 2, mitochondrial	protein-coding
common_peak2-29763-15-11-0.4272022498345-0.503257505534083	chr6	87101264	87101734	+	0	NA	intron (NM_054041, intron 17 of 17)	intron (NM_054041, intron 17 of 17)	46759	NM_001167937	52372	Mm.282851	NM_001167937		D6Ertd527e	AU043841	DNA segment, Chr 6, ERATO Doi 527, expressed	protein-coding
unique_peak2-39056-2-6--1.72480917832092-1.26211192963361	chr8	70840209	70840500	+	0	NA	intron (NM_028182, intron 4 of 8)	L1_Mus1|LINE|L1	39927	NM_028182	72281	Mm.40974	NM_028182	ENSMUSG00000053886	Sh2d4a	2210402M20Rik|SH2A	SH2 domain containing 4A	protein-coding
unique_peak2-33004-3-6--1.22133801201688-1.08602067057793	chr10	61669472	61669819	+	0	NA	intron (NM_197996, intron 1 of 7)	(GGA)n|Simple_repeat|Simple_repeat	-12670	NR_106122	102465767		NR_106122		Mir7662	mmu-mir-7662	microRNA mir-7662	ncRNA
unique_peak2-38905-5-7--0.704380336005853-1.01466476204226	chr8	13614692	13615080	+	0	NA	intron (NM_009025, intron 2 of 23)	intron (NM_009025, intron 2 of 23)	-52425	NM_001080781	66501	Mm.46136	NM_025601	ENSMUSG00000031452	1700029H14Rik	-	RIKEN cDNA 1700029H14 gene	protein-coding
unique_peak2-39284-3-7--1.41398308995928-1.23214870625617	chr8	122443830	122444140	+	0	NA	intron (NM_009462, intron 1 of 13)	B3|SINE|B2	9233	NM_009462	22224	Mm.256910	NM_009462	ENSMUSG00000031826	Usp10	2610014N07Rik|UBPO|Uchrp|mKIAA0190	ubiquitin specific peptidase 10	protein-coding
unique_peak1-2716-12-7-0.648775985087639-0.697979855752659	chr16	92183441	92184004	+	0	NA	Intergenic	Intergenic	-108912	NM_134110	246133	Mm.156736	NM_134110	ENSMUSG00000039672	Kcne2	2200002I16Rik|AW048273|MiRP1	potassium voltage-gated channel, Isk-related subfamily, gene 2	protein-coding
common_peak1-8826-7-9--0.522837264589173-1.05908390183068	chr11	23008255	23008744	+	0	NA	Intergenic	RMER16-int|LTR|ERVK	95112	NM_028672	73873	Mm.252406	NM_028672	ENSMUSG00000049811	Fam161a	4930430E16Rik	family with sequence similarity 161, member A	protein-coding
common_peak1-9677-14-10-0.439784541720347-0.519648556297791	chr12	8805266	8805923	+	0	NA	Intergenic	Intergenic	27392	NM_011519	20969	Mm.2580	NM_011519	ENSMUSG00000020592	Sdc1	AA408134|AA409076|CD138|Sstn|Synd|Synd1|syn-1	syndecan 1	protein-coding
unique_peak2-35976-3-8--1.58390809140159-1.39487600375387	chr19	21882071	21882540	+	0	NA	intron (NM_031997, intron 7 of 24)	intron (NM_031997, intron 7 of 24)	29475	NM_031997	83921	Mm.329776	NM_031997	ENSMUSG00000024754	Tmem2	-	transmembrane protein 2	protein-coding
common_peak1-14905-12-18--0.599151528355947-0.476916024233333	chr3	96635299	96635921	+	0	NA	promoter-TSS (NM_001146001)	promoter-TSS (NM_001146001)	383	NR_015596	67583	Mm.444284	NR_015596		4930442L01Rik	-	RIKEN cDNA 4930442L01 gene	ncRNA
unique_peak2-39149-1-8--2.79698201165906-2.05605744720049	chr8	87472086	87472530	+	0	NA	intron (NM_144929, intron 1 of 5)	intron (NM_144929, intron 1 of 5)	1418	NM_144929	234542	Mm.461701	NM_144929	ENSMUSG00000048617	Rtbdn	A330096I21Rik|BC022744|Rtbnd	retbindin	protein-coding
unique_peak1-5192-11-0-3.50869358425161-3.61235994796777	chr5	32388268	32388843	+	0	NA	Intergenic	Intergenic	-50290	NM_008037	14284	Mm.24684	NM_008037	ENSMUSG00000029135	Fosl2	Fra-2	fos-like antigen 2	protein-coding
unique_peak2-38104-5-7--0.704380336005853-1.01466476204226	chr6	70813995	70814449	+	0	NA	intron (NM_010121, intron 2 of 16)	intron (NM_010121, intron 2 of 16)	19701	NM_010121	13666	Mm.247167	NM_010121	ENSMUSG00000031668	Eif2ak3	AI427929|Pek|Perk	eukaryotic translation initiation factor 2 alpha kinase 3	protein-coding
unique_peak1-1685-9-3-1.18961340640422-1.57096726280955	chr13	73744837	73745385	+	0	NA	intron (NM_146047, intron 3 of 16)	intron (NM_146047, intron 3 of 16)	3661	NM_146047	218335	Mm.30099	NM_146047	ENSMUSG00000021610	Clptm1l	C130052I12Rik|Crr9	CLPTM1-like	protein-coding
unique_peak2-34830-9-24--1.4542427833705-1.83731222263754	chr15	75050254	75051156	+	0	NA	Intergenic	B4A|SINE|B4	-48146	NM_008530	17071	Mm.377095	NM_008530	ENSMUSG00000022583	Ly6f	-	lymphocyte antigen 6 complex, locus F	protein-coding
common_peak1-11231-34-20-0.989751104222505-2.03367508793052	chr15	79389575	79390922	+	0	NA	Intergenic	RMER6A|LTR|ERVK	-13077	NM_199080	67040	Mm.29644	NM_152806	ENSMUSG00000055065	Ddx17	2610007K22Rik|A430025E01Rik|AI047725|C80929|Gm926|p72	DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	protein-coding
common_peak2-27750-46-72--0.291828615631216-0.53824527020727	chr3	127779395	127780902	+	0	NA	Intergenic	RLTR25B|LTR|ERVK	154375	NR_045704	402774	Mm.209170	NR_045704		D030025E07Rik	-	RIKEN cDNA D030025E07 gene	ncRNA
common_peak2-30173-16-9-0.796335547380699-0.844317084070804	chr6	149193177	149193749	+	0	NA	Intergenic	Intergenic	-56229	NM_001113424	232566	Mm.209147	NM_001113424	ENSMUSG00000068250	Amn1	5830467E07Rik|A230083D09|C730024G19Rik	antagonist of mitotic exit network 1	protein-coding
unique_peak1-2115-9-3-1.18961340640422-1.57096726280955	chr15	41695529	41696051	+	0	NA	Intergenic	Intergenic	5476	NM_175456	223513	Mm.148913	NM_175456	ENSMUSG00000042895	Abra	C130068O12Rik|STARS	actin-binding Rho activating protein	protein-coding
common_peak2-24979-132-223--0.088906729974739-0.373088032955213	chr18	7868491	7870431	+	0	NA	5' UTR (NM_001146298, exon 1 of 13)	5' UTR (NM_001146298, exon 1 of 13)	266	NM_153085	225131	Mm.204524	NM_153085	ENSMUSG00000024283	Wac	1110067P07Rik|A230035H12Rik|AI256735|AI256776|Wwp4	WW domain containing adaptor with coiled-coil	protein-coding
common_peak2-30872-11-8-0.338768582809301-1.14218153353838	chr7	140057821	140058260	+	0	NA	intron (NM_198017, intron 2 of 8)	intron (NM_198017, intron 2 of 8)	7132	NM_198017	109359	Mm.274824	NM_198017	ENSMUSG00000030965	Fam175b	AA589499|AI853413|Abro1|C430003P19Rik	family with sequence similarity 175, member B	protein-coding
common_peak2-26488-11-6-0.701338662194009-1.32595962126035	chr2	80688866	80689306	+	0	NA	Intergenic	Intergenic	209665	NM_001190179	69482	Mm.29200	NM_027091		Nup35	2310006I24Rik|35kDa|5330402E05Rik|MP44|NO44	nucleoporin 35	protein-coding
common_peak2-29628-11-9-0.186765489364251-0.344532117358383	chr6	55619417	55619848	+	0	NA	Intergenic	Intergenic	11625	NM_009717	11922	Mm.5106	NM_009717	ENSMUSG00000037984	Neurod6	Atoh2|Math-2|Math2|Nex|Nex1m|bHLHa2	neurogenic differentiation 6	protein-coding
common_peak2-30010-35-32-0.386976139104051-0.652627812244279	chr6	124919860	124920826	+	0	NA	Intergenic	ID_B1|SINE|B4	-4796	NM_001164089	26894	Mm.244536	NM_012003	ENSMUSG00000030127	Cops7a	D6Ertd35e	COP9 (constitutive photomorphogenic) homolog, subunit 7a (Arabidopsis thaliana)	protein-coding
common_peak2-30009-37-55--0.281361850571785-0.475408985215012	chr6	124916825	124918020	+	0	NA	Intergenic	MTD|LTR|MaLR	-1875	NM_001164089	26894	Mm.244536	NM_012003	ENSMUSG00000030127	Cops7a	D6Ertd35e	COP9 (constitutive photomorphogenic) homolog, subunit 7a (Arabidopsis thaliana)	protein-coding
unique_peak1-5898-11-5-0.923731083530457-1.477227296591	chr6	87293032	87293707	+	0	NA	Intergenic	MTC|LTR|MaLR	7540	NM_025466	66283	Mm.46414	NM_025466	ENSMUSG00000030050	Gkn1	2200002K21Rik|AMP-18|BRICD1|Fov	gastrokine 1	protein-coding
common_peak1-19036-23-28--0.136213490618491-0.317118655902079	chr9	64960835	64961574	+	0	NA	exon (NM_001290315, exon 2 of 20)	exon (NM_001290315, exon 2 of 20)	11911	NM_020043	56741	Mm.209041	NM_020043	ENSMUSG00000032816	Igdcc4	DDM36|Nope	immunoglobulin superfamily, DCC subclass, member 4	protein-coding
common_peak1-8521-21-40--0.788062739351848-1.17890083738706	chr10	85184780	85185671	+	0	NA	Intergenic	MYSERV-int|LTR|ERVK	124069	NM_001017525	74007	Mm.36544	NM_028709	ENSMUSG00000020042	Btbd11	6330404E16Rik	BTB (POZ) domain containing 11	protein-coding
common_peak2-32372-11-13--0.298661337805991-0.337263207250336	chrX	103652603	103653296	+	0	NA	intron (NM_001007580, intron 4 of 26)	intron (NM_001007580, intron 4 of 26)	27619	NM_001007580	333564	Mm.298000	NM_001007580	ENSMUSG00000033737	Fndc3c1	Fndc3c|Gm784	fibronectin type III domain containing 3C1	protein-coding
common_peak2-19686-112-114-0.587760249375908-2.95366328221021	chr1	58710833	58712233	+	0	NA	intron (NR_045007, intron 1 of 1)	intron (NR_045007, intron 1 of 1)	2048	NR_045007	100504501	Mm.440933	NR_045007		Gm20257	-	caspase 8 pseudogene	pseudo
common_peak2-30091-9-12--0.510826311736872-0.394412252720706	chr6	134916676	134917161	+	0	NA	Intergenic	Intergenic	-15101	NM_001109914	381823	Mm.296104	NM_001109914	ENSMUSG00000090698	Apold1	Gm1075	apolipoprotein L domain containing 1	protein-coding
unique_peak2-34723-5-9--1.02630843089322-1.21398586181642	chr15	36872959	36873367	+	0	NA	Intergenic	Intergenic	63994	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
common_peak1-14008-44-29-0.915002238960017-2.3171515282213	chr2	109277603	109278528	+	0	NA	Intergenic	Intergenic	157170	NM_139303	228421	Mm.274086	NM_139303	ENSMUSG00000027115	Kif18a	AU024633|B130001M12Rik	kinesin family member 18A	protein-coding
common_peak2-26537-7-9--0.522837264589173-1.05908390183068	chr2	92185187	92185778	+	0	NA	intron (NM_138755, intron 10 of 17)	Charlie25|DNA|MER1_type	25732	NM_001290774	228366	Mm.31158	NM_172670	ENSMUSG00000040434	Gyltl1b	5730485C17Rik|AI891893|Large2|Largel|mKIAA4105	glycosyltransferase-like 1B	protein-coding
common_peak1-15850-60-137--0.754232595157638-3.33279149198236	chr5	3340690	3342221	+	0	NA	Intergenic	CpG	-2857	NM_009873	12571	Mm.31672	NM_009873	ENSMUSG00000040274	Cdk6	5830411I20|AI504062|Crk2	cyclin-dependent kinase 6	protein-coding
unique_peak2-34963-10-19--0.965512749878593-0.917676348953458	chr15	97101112	97102124	+	0	NA	intron (NM_172293, intron 1 of 5)	intron (NM_172293, intron 1 of 5)	-23900	NM_001164602	105827	Mm.24005	NM_178114	ENSMUSG00000048218	Amigo2	AI415330|AMIGO-2|AW208913|Ali1	adhesion molecule with Ig like domain 2	protein-coding
common_peak1-8736-29-12-1.41185036247402-2.85339697372352	chr11	3535260	3536409	+	0	NA	Intergenic	L1Md_A|LINE|L1	11705	NR_110490	544752	Mm.390314	NR_002321	ENSMUSG00000056579	Tug1	AI316828	taurine upregulated gene 1	ncRNA
unique_peak1-2094-10-0-3.35641534500877-3.31132995230379	chr15	37024382	37024933	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-87500	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
common_peak1-13622-12-18--0.599151528355947-0.476916024233333	chr2	25054423	25055139	+	0	NA	TTS (NM_021393)	TTS (NM_021393)	-2448	NM_146115	227612	Mm.119747	NM_146115	ENSMUSG00000059555	Tor4a	A830007P12Rik	torsin family 4, member A	protein-coding
unique_peak1-4438-10-5-0.771452844287613-1.33892459842472	chr2	169694252	169694771	+	0	NA	intron (NM_080455, intron 1 of 1)	B3|SINE|B2	201660	NR_033634	100043910	Mm.468546	NR_033632	ENSMUSG00000097065	A630075F10Rik	4831414D02|Gm4722	RIKEN cDNA A630075F10 gene	ncRNA
unique_peak1-7082-8-5-0.420259917226415-1.10484139239135	chr9	22003148	22003676	+	0	NA	intron (NM_001033813, intron 3 of 3)	intron (NM_001033813, intron 3 of 3)	10802	NM_001033813	619310	Mm.335016	NM_001033813	ENSMUSG00000074472	Zfp872	9530015I07Rik	zinc finger protein 872	protein-coding
common_peak1-9669-43-43-0.323131566886405-0.62090566497527	chr12	4233741	4235094	+	0	NA	promoter-TSS (NM_134046)	promoter-TSS (NM_134046)	-123	NM_134046	52504	Mm.70546	NM_134046	ENSMUSG00000020652	Cenpo	2810429O05Rik|8430427C03Rik|D12Ertd482e	centromere protein O	protein-coding
common_peak2-23608-74-118--0.178931186329336-0.465687833458293	chr15	81521540	81523963	+	0	NA	intron (NM_001164320, intron 4 of 5)	intron (NM_001164320, intron 4 of 5)	4966	NM_001164320	214685	Mm.393287	NM_001164320	ENSMUSG00000063765	Chadl	AY100452|D930017K21Rik	chondroadherin-like	protein-coding
common_peak2-23947-9-8-0.0196884049619079-1.03275496310833	chr16	14158734	14159213	+	0	NA	promoter-TSS (NR_030252)	promoter-TSS (NR_030252)	394	NM_001081154	223989	Mm.85442	NM_001081154	ENSMUSG00000060657	Marf1	4921513D23Rik|BC031575|C87306|E030019O05|Lkap|mKIAA0430	meiosis arrest female 1	protein-coding
unique_peak1-5431-11-3-1.50869358425161-1.95434855131066	chr5	114718732	114719327	+	0	NA	intron (NM_148935, intron 2 of 9)	intron (NM_148935, intron 2 of 9)	4741	NM_148935	116810	Mm.17709	NM_148935	ENSMUSG00000042002	Foxn4	-	forkhead box N4	protein-coding
common_peak2-28219-14-18--0.348711353085941-0.360333814299795	chr4	118437389	118438269	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-10688	NM_207152	258259	Mm.377398	NM_207152	ENSMUSG00000095218	Olfr1338	MOR259-4P|MOR259-9|Olfr1524-ps1	olfactory receptor 1338	protein-coding
common_peak2-31121-9-10--0.269818212233077-1.05503135781948	chr8	33902792	33903255	+	0	NA	Intergenic	Intergenic	157475	NM_001177589	100042715	Mm.291093	NM_001177589		Gm3985	-	predicted gene 3985	protein-coding
common_peak1-18264-29-15-1.11229008061511-2.08778000015696	chr8	34762712	34763703	+	0	NA	promoter-TSS (NM_010344)	promoter-TSS (NM_010344)	-503	NM_010344	14782	Mm.283573	NM_010344	ENSMUSG00000031584	Gsr	AI325518|D8Ertd238e|Gr-1|Gr1	glutathione reductase	protein-coding
common_peak1-14220-127-146-0.451714166491692-2.20203522467824	chr2	152104803	152106513	+	0	NA	3' UTR (NM_007788, exon 13 of 13)	3' UTR (NM_007788, exon 13 of 13)	-13950	NM_024196	67231	Mm.288733	NM_024196		Tbc1d20	1110028I04Rik|2810442O16Rik|AI414693	TBC1 domain family, member 20	protein-coding
common_peak2-29180-9-10--0.269818212233077-1.05503135781948	chr5	134958557	134959194	+	0	NA	Intergenic	ID_B1|SINE|B4	-26289	NM_001081464	57080	Mm.332735	NM_020331	ENSMUSG00000023079	Gtf2ird1	1700012P16Rik|BEN|Cream1|ESTM9|GTF3|Gtf2il|MusTRD1|Tg(Alb1-Myc)166.8Sst|WBSCR11|X83320	general transcription factor II I repeat domain-containing 1	protein-coding
unique_peak1-4811-18-4-1.99099105634099-2.82951996911245	chr3	142331155	142332017	+	0	NA	Intergenic	Intergenic	-32426	NM_173763	229905	Mm.289643	NM_173763	ENSMUSG00000040213	Ccbl2	KATIII|Kat3	cysteine conjugate-beta lyase 2	protein-coding
common_peak2-29669-16-14-0.211373046659543-0.364171515310935	chr6	72278186	72278844	+	0	NA	exon (NM_138592, exon 9 of 13)	exon (NM_138592, exon 9 of 13)	16654	NM_138592	28035	Mm.281900	NM_138592	ENSMUSG00000056305	Usp39	AA408960|AI894154|CGI-21|D6Wsu157e|SAD1	ubiquitin specific peptidase 39	protein-coding
common_peak2-27524-17-9-0.896368243317676-1.09394599973099	chr3	95700197	95700677	+	0	NA	3' UTR (NM_146104, exon 6 of 6)	3' UTR (NM_146104, exon 6 of 6)	2593	NM_146134	226548	Mm.306954	NM_146104	ENSMUSG00000015750	Aph1a	6530402N02Rik|APH-1a	anterior pharynx defective 1a homolog (C. elegans)	protein-coding
common_peak1-8545-45-125--1.11692189815505-5.75354503416139	chr10	93310018	93311467	+	0	NA	3' UTR (NM_183199, exon 4 of 4)	3' UTR (NM_183199, exon 4 of 4)	16442	NM_001206851	327799	Mm.491598	NM_183199	ENSMUSG00000020020	Usp44	E430004F17Rik	ubiquitin specific peptidase 44	protein-coding
common_peak2-22681-14-24--0.74464002941708-0.756118839439549	chr13	98205714	98206762	+	0	NA	intron (NR_110432, intron 1 of 1)	intron (NR_110432, intron 1 of 1)	1313	NR_110432	100039691	Mm.219358	NR_110430		Lincenc1	ENSMUSG00000078952|Gm11019|Gm2373|linc-Enc1	long intergenic non-coding RNA, embryonic stem cells expressed 1	ncRNA
common_peak1-13310-93-95-0.526107362785113-2.03414581212043	chr19	41829191	41830913	+	0	NA	Intergenic	Intergenic	8601	NR_040320	100502871	Mm.394485	NR_040320		Gm19424	-	predicted gene, 19424	ncRNA
unique_peak1-7050-9-1-2.18961340640422-2.31132995230379	chr9	50479028	50479533	+	0	NA	intron (NM_178118, intron 17 of 19)	L1Md_F2|LINE|L1	-11395	NM_145614	235339	Mm.285076	NM_145614	ENSMUSG00000000168	Dlat	6332404G05Rik|DLTA|PDC-E2	dihydrolipoamide S-acetyltransferase (E2 component of pyruvate dehydrogenase complex)	protein-coding
common_peak2-25923-10-5-0.771452844287613-1.33892459842472	chr19	46478130	46478435	+	0	NA	intron (NM_001025391, intron 2 of 11)	B3A|SINE|B2	6896	NM_015752	24069	Mm.41210	NM_015752	ENSMUSG00000025231	Sufu	Su(fu)	suppressor of fused homolog (Drosophila)	protein-coding
common_peak1-19366-20-34--0.641208232353773-0.863762398024911	chrX	17571559	17572437	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-150998	NM_028568	73547	Mm.159027	NM_028568	ENSMUSG00000025043	Dusp21	1700094E07Rik|DSP21	dual specificity phosphatase 21	protein-coding
unique_peak2-32921-9-14--0.717277189204299-0.53895475198017	chr10	24628696	24629184	+	0	NA	intron (NM_001166416, intron 27 of 29)	intron (NM_001166416, intron 27 of 29)	-1530	NR_105870	102465545		NR_105870		Mir6905	mmu-mir-6905	microRNA mir-6905	ncRNA
common_peak1-11591-10-12--0.344024373132323-0.340565874754526	chr16	16896851	16897447	+	0	NA	intron (NM_176833, intron 1 of 7)	intron (NM_176833, intron 1 of 7)	587	NM_176833	68606	Mm.230296	NM_176833	ENSMUSG00000026181	Ppm1f	1110021B16Rik|4933427B07Rik|CaMKPase|Popx2|mKIAA0015	protein phosphatase 1F (PP2C domain containing)	protein-coding
unique_peak1-4484-10-3-1.35641534500877-1.75805390616669	chr3	86998886	86999401	+	0	NA	Intergenic	Intergenic	-20474	NM_130867	170643	Mm.89552	NM_130867	ENSMUSG00000041734	Kirrel	6720469N11Rik|Kirrel1|Neph1	kin of IRRE like (Drosophila)	protein-coding
common_peak2-32152-50-53-0.286052814315484-0.610031908571722	chr9	108460351	108461538	+	0	NA	intron (NM_175143, intron 9 of 9)	intron (NM_175143, intron 9 of 9)	-1888	NM_011830	23918	Mm.6065	NM_011830	ENSMUSG00000062867	Impdh2	IMPD	inosine 5'-phosphate dehydrogenase 2	protein-coding
common_peak1-18800-42-15-1.74232932786718-5.38214435188357	chr9	62814597	62816352	+	0	NA	intron (NM_019663, intron 1 of 13)	intron (NM_019663, intron 1 of 13)	13212	NM_019663	56469	Mm.431253	NM_019663	ENSMUSG00000032405	Pias1	2900068C24Rik|Ddxbp1|GBP	protein inhibitor of activated STAT 1	protein-coding
common_peak2-24927-47-58-0.0521983754047062-0.317454636273721	chr17	87530045	87532194	+	0	NA	intron (NM_019654, intron 2 of 2)	intron (NM_019654, intron 2 of 2)	24100	NM_019654	56468	Mm.126885	NM_019654	ENSMUSG00000037104	Socs5	1810018L08Rik|Cish5|mKIAA0671	suppressor of cytokine signaling 5	protein-coding
unique_peak1-2310-8-4-0.683294323060208-1.21878474469819	chr15	81700366	81700869	+	0	NA	intron (NM_026737, intron 3 of 3)	intron (NM_026737, intron 3 of 3)	1705	NM_026737	68479	Mm.271715	NM_026737		Phf5a	1110007B08Rik	PHD finger protein 5A	protein-coding
common_peak2-28601-31-45--0.29832328524389-0.470780655014941	chr5	22549590	22550747	+	0	NA	intron (NM_001081231, intron 1 of 3)	intron (NM_001081231, intron 1 of 3)	-297466	NR_027362	330052	Mm.459265	NR_027362		A930003O13Rik	-	RIKEN cDNA A930003O13 gene	ncRNA
unique_peak2-39502-0-13--4.64748585253181-3.36932189928148	chr9	62608516	62608739	+	0	NA	intron (NM_176922, intron 16 of 29)	intron (NM_176922, intron 16 of 29)	50828	NM_010193	14155	Mm.24069	NM_010193	ENSMUSG00000032244	Fem1b	mKIAA0396	feminization 1 homolog b (C. elegans)	protein-coding
unique_peak2-35492-2-8--2.08737925770563-1.65811743852845	chr17	46266654	46267138	+	0	NA	intron (NM_029338, intron 4 of 4)	intron (NM_029338, intron 4 of 4)	14251	NM_029338	75564	Mm.17993	NM_029338	ENSMUSG00000023966	Rsph9	1700027N10Rik	radial spoke head 9 homolog (Chlamydomonas)	protein-coding
common_peak1-8773-75-116--0.13129772784012-0.379925531631896	chr11	6625585	6627150	+	0	NA	Intergenic	Intergenic	-6327	NR_046025	626419	Mm.390334	NR_046025	ENSMUSG00000086808	Gm11981	OTTMUSG00000005129	predicted gene 11981	ncRNA
common_peak1-9090-39-43-0.156329628281856-0.386060992278541	chr11	69920385	69921439	+	0	NA	Intergenic	Intergenic	14766	NM_007493	11890	Mm.1357	NM_007493	ENSMUSG00000040963	Asgr2	ASGPR2|Asgr|Asgr-2	asialoglycoprotein receptor 2	protein-coding
common_peak2-25373-23-33--0.365695336741259-0.481798116163913	chr18	82910528	82911630	+	0	NA	Intergenic	ORR1B1|LTR|MaLR	17352	NR_045389	76961	Mm.396392	NR_045389		2210420H20Rik	-	RIKEN cDNA 2210420H20 gene	ncRNA
common_peak2-31301-37-68--0.58253138529235-1.22876277037648	chr8	75033436	75034838	+	0	NA	intron (NM_027485, intron 1 of 2)	intron (NM_027485, intron 1 of 2)	-17624	NM_177766	270066	Mm.291461	NM_177766	ENSMUSG00000019731	Slc35e1	6030458H05|AA408278	solute carrier family 35, member E1	protein-coding
unique_peak1-7161-11-3-1.50869358425161-1.95434855131066	chr9	58454710	58455300	+	0	NA	intron (NM_001293673, intron 1 of 7)	intron (NM_001293673, intron 1 of 7)	24958	NM_009145	20320	Mm.15125	NM_009145	ENSMUSG00000032336	Nptn	AW554172|SDR-1|Sdfr1	neuroplastin	protein-coding
common_peak2-22662-17-17-0.0483713367627256-0.325169893479371	chr13	95617904	95618696	+	0	NA	Intergenic	Intergenic	-27282	NM_011021	18420	Mm.42051	NM_011021		Otp	-	orthopedia homolog (Drosophila)	protein-coding
unique_peak1-3083-12-2-2.06381348436648-2.79529063155376	chr18	23716818	23717397	+	0	NA	intron (NM_001285807, intron 5 of 24)	intron (NM_001285807, intron 5 of 24)	61124	NM_001285810	13527	Mm.94371	NM_010087	ENSMUSG00000024302	Dtna	2210407P21Rik|DTN-A|Dtn|Gm19389|a-DB-1|adbn	dystrobrevin alpha	protein-coding
common_peak1-19005-26-31--0.0721009078415378-0.304589945962371	chr9	60501398	60502462	+	0	NA	intron (NM_145616, intron 8 of 16)	intron (NM_145616, intron 8 of 16)	33411	NM_001146047	102747	Mm.269413	NM_145616	ENSMUSG00000047766	Lrrc49	AI430817|AW050057|D430025H09Rik|PGs4|p79	leucine rich repeat containing 49	protein-coding
common_peak2-25423-8-7-0.00522241794757061-1.00793137938329	chr19	3321684	3322157	+	0	NA	Intergenic	Intergenic	-1381	NM_013495	12894	Mm.18522	NM_013495	ENSMUSG00000024900	Cpt1a	C730027G07|CPTI|Cpt1	carnitine palmitoyltransferase 1a, liver	protein-coding
unique_peak1-3159-9-0-3.18961340640422-3.01029995663981	chr18	38016911	38017521	+	0	NA	intron (NM_007858, intron 18 of 26)	intron (NM_007858, intron 18 of 26)	-2902	NR_105945	102465592		NR_105945		Mir6979	mmu-mir-6979	microRNA mir-6979	ncRNA
unique_peak2-37904-8-14--0.901668177660948-0.660903317613906	chr5	143043485	143044072	+	0	NA	intron (NM_175217, intron 6 of 6)	intron (NM_175217, intron 6 of 6)	-16726	NM_001289588	231858	Mm.33766	NM_178702	ENSMUSG00000029576	Radil	AI536456|D930005D10Rik	Ras association and DIL domains	protein-coding
unique_peak2-33101-7-10--0.660340788339108-1.12966497611638	chr10	80702247	80702805	+	0	NA	intron (NM_001034895, intron 3 of 17)	intron (NM_001034895, intron 3 of 17)	6618	NM_001034895	103406	Mm.158783	NM_001034895	ENSMUSG00000034949	Zfr2	2010013I23Rik|9130206N08Rik|AW045600|mKIAA1086	zinc finger RNA binding protein 2	protein-coding
common_peak1-11176-16-27--0.689091279789542-0.798885335210229	chr15	76477378	76478013	+	0	NA	3' UTR (NM_001276321, exon 4 of 4)	3' UTR (NM_001276321, exon 4 of 4)	-7336	NM_183091	72749	Mm.358749	NM_183091	ENSMUSG00000059323	Tonsl	2810439M11Rik|Nfkbil2	tonsoku-like, DNA repair protein	protein-coding
common_peak1-11742-22-11-1.06232160436625-1.51503956548638	chr16	34958006	34958961	+	0	NA	intron (NR_045722, intron 1 of 2)	intron (NR_045722, intron 1 of 2)	467	NR_045722	278725	Mm.436927	NR_045722		E130310I04Rik	A930019C19Rik	RIKEN cDNA E130310I04 gene	ncRNA
common_peak2-31034-22-17-0.477359103645092-0.633951497070961	chr8	13648342	13649094	+	0	NA	intron (NM_009025, intron 1 of 23)	intron (NM_009025, intron 1 of 23)	28869	NM_009025	19414	Mm.18517	NM_009025	ENSMUSG00000031453	Rasa3	AI326412|C86362|E130011G04|GAPIII|scat	RAS p21 protein activator 3	protein-coding
common_peak1-9570-7-9--0.522837264589173-1.05908390183068	chr11	117986734	117987257	+	0	NA	exon (NM_001167746, exon 5 of 81)	exon (NM_001167746, exon 5 of 81)	3538	NM_001167746	69926	Mm.473893	NM_001167746	ENSMUSG00000033987	Dnah17	2810003K23Rik|Dnahc17|Dnahcl1|Gm1178|mKIAA3028	dynein, axonemal, heavy chain 17	protein-coding
common_peak1-16789-34-33-0.294605685750927-0.53611512876719	chr6	40324948	40326284	+	0	NA	intron (NM_023538, intron 8 of 15)	intron (NM_023538, intron 8 of 15)	50139	NM_023538	69923	Mm.32840	NM_023538	ENSMUSG00000029916	Agk	2610037M15Rik|6720408I04Rik|AI465370|Mulk	acylglycerol kinase	protein-coding
common_peak1-11410-33-66--0.734751627932243-1.70008721686218	chr15	98992837	98993989	+	0	NA	intron (NM_139140, intron 2 of 12)	CT-rich|Low_complexity|Low_complexity	36137	NM_139140	72572	Mm.276650	NM_139140	ENSMUSG00000051934	Spats2	2700012F11Rik|59kDa|Scr59|p59	spermatogenesis associated, serine-rich 2	protein-coding
common_peak2-31236-7-6--0.00826409175941478-0.97990265578305	chr8	70140275	70140695	+	0	NA	Intergenic	L1Md_A|LINE|L1	92732	NM_008674	17962	Mm.57193	NM_008674	ENSMUSG00000056426	Nat3	-	N-acetyltransferase 3	protein-coding
common_peak2-32148-15-16--0.075298090694683-0.301029995663976	chr9	108262922	108263729	+	0	NA	intron (NM_011678, intron 4 of 21)	B4A|SINE|B4	13163	NM_011678	22258	Mm.3974	NM_011678	ENSMUSG00000032612	Usp4	F730026I20Rik|Unp|mKIAA4155	ubiquitin specific peptidase 4 (proto-oncogene)	protein-coding
unique_peak2-39783-10-19--0.965512749878593-0.917676348953458	chrX	10216015	10216624	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-78172	NM_026524	68041	Mm.29429	NM_026524	ENSMUSG00000008035	Mid1ip1	3110038L01Rik|Mig12|S14R	Mid1 interacting protein 1 (gastrulation specific G12-like (zebrafish))	protein-coding
common_peak1-13518-20-20-0.0957573618124323-0.321718508207528	chr2	122764847	122765905	+	0	NA	Intergenic	Lx8|LINE|L1	157641	NM_021507	59010	Mm.28986	NM_021507	ENSMUSG00000005803	Sqrdl	0610039J17Rik|4930557M22Rik	sulfide quinone reductase-like (yeast)	protein-coding
common_peak1-12215-286-409-0.385024624100165-3.96388964144537	chr17	34119508	34123034	+	0	NA	non-coding (NR_033305, exon 1 of 1)	non-coding (NR_033305, exon 1 of 1)	2834	NR_033305	433100	Mm.380381	NM_001013793		AA388235	-	expressed sequence AA388235	ncRNA
common_peak1-7497-27-12-1.29110623275414-2.3494062982954	chr1	10932366	10933692	+	0	NA	Intergenic	Intergenic	-50517	NM_029525	109294	Mm.123247	NM_029525	ENSMUSG00000048960	Prex2	6230420N16Rik|AI316880|AI553603|C030045D06Rik|D430013K02|Depdc2|P-Rex2	phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2	protein-coding
unique_peak1-4952-9-0-3.18961340640422-3.01029995663981	chr4	97698673	97699234	+	0	NA	intron (NM_001122953, intron 6 of 9)	intron (NM_001122953, intron 6 of 9)	254636	NM_010905	18027	Mm.31274	NM_010905	ENSMUSG00000028565	Nfia	1110047K16Rik|9430022M17Rik|CTF|NF1-A|NF1A	nuclear factor I/A	protein-coding
common_peak2-31499-13-14--0.12841856497075-0.301029995663977	chr8	107048186	107048840	+	0	NA	intron (NM_144931, intron 7 of 19)	PB1D7|SINE|Alu	10024	NM_144931	234664	Mm.237670	NM_144931	ENSMUSG00000031878	Nae1	59kDa|Appbp1	NEDD8 activating enzyme E1 subunit 1	protein-coding
common_peak2-21311-18-27--0.494435770829252-0.528262014464654	chr11	74829715	74830800	+	0	NA	intron (NM_001002764, intron 10 of 18)	intron (NM_001002764, intron 10 of 18)	49236	NR_030454	735274		NR_030454		Mir684-1	Mirn684-1	microRNA 684-1	ncRNA
common_peak1-11918-37-37-0.278065558042234-0.513362016391488	chr17	42875628	42876967	+	0	NA	intron (NM_001033493, intron 1 of 5)	B3|SINE|B2	2831	NM_001033493	435529	Mm.136350	NM_001033493	ENSMUSG00000057899	Gpr111	PGR20	G protein-coupled receptor 111	protein-coding
common_peak1-13332-12-6-0.841421063030034-1.58711810488664	chr19	43612658	43613211	+	0	NA	Intergenic	RMER17B|LTR|ERVK	-13839	NM_010324	14718	Mm.19039	NM_010324	ENSMUSG00000025190	Got1	AI789014|Got-1|cAspAT|cCAT	glutamate oxaloacetate transaminase 1, soluble	protein-coding
common_peak2-27148-50-45-0.517378360421939-1.16897173470069	chr3	28805391	28806022	+	0	NA	intron (NM_001033479, intron 6 of 14)	Lx3_Mus|LINE|L1	14167	NM_001033479	385263	Mm.60893	NM_001033479	ENSMUSG00000074655	Gm1527	Gm1136	predicted gene 1527	protein-coding
common_peak2-31127-20-34--0.641208232353773-0.863762398024911	chr8	34154496	34155160	+	0	NA	Intergenic	Intergenic	-94330	NM_001177589	100042715	Mm.291093	NM_001177589		Gm3985	-	predicted gene 3985	protein-coding
common_peak2-30805-63-69-0.309029574125623-0.753034214639445	chr7	127511867	127513114	+	0	NA	intron (NM_177213, intron 16 of 30)	intron (NM_177213, intron 16 of 30)	40292	NM_177213	320631	Mm.78330	NM_177213	ENSMUSG00000054746	Abca15	4930500I12Rik	ATP-binding cassette, sub-family A (ABC1), member 15	protein-coding
common_peak1-11732-12-15--0.351224014912361-0.332077462497413	chr16	33580764	33581421	+	0	NA	intron (NM_134251, intron 4 of 12)	intron (NM_134251, intron 4 of 12)	62411	NM_001083902	171286	Mm.35253	NM_134251	ENSMUSG00000035506	Slc12a8	CCC9|E330020C02Rik	solute carrier family 12 (potassium/chloride transporters), member 8	protein-coding
common_peak1-17743-46-39-0.576067848361439-1.27570999829275	chr7	81344408	81345658	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	-186465	NM_009181	20450	Mm.4954	NM_009181	ENSMUSG00000025789	St8sia2	AI323367|ST8SiaII|STX|Siat8b	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2	protein-coding
common_peak1-18225-54-63-0.173085761629734-0.4314150221026	chr8	25840049	25841955	+	0	NA	intron (NM_001272059, intron 18 of 18)	intron (NM_001272059, intron 18 of 18)	-4705	NM_009619	11497	Mm.5168	NM_009619	ENSMUSG00000031553	Adam3	Cyrn1|Taz83|tMDC	a disintegrin and metallopeptidase domain 3 (cyritestin)	protein-coding
common_peak2-28927-23-34--0.407515512435886-0.533344939162177	chr5	92960662	92961945	+	0	NA	Intergenic	RMER16-int|LTR|ERVK	-26669	NM_007644	12492	Mm.297964	NM_007644	ENSMUSG00000029426	Scarb2	9330185J12Rik|Cd36l2|LGP85|LIMP-2|MLGP85	scavenger receptor class B, member 2	protein-coding
unique_peak1-4928-10-3-1.35641534500877-1.75805390616669	chr4	59298406	59299031	+	0	NA	Intergenic	Intergenic	25795	NR_105031	101055769	Mm.421401	NR_105031		LOC101055769	-	uncharacterized LOC101055769	ncRNA
unique_peak1-2730-8-3-1.00522241794757-1.39487600375387	chr16	95770635	95771152	+	0	NA	Intergenic	(GAGAA)n|Simple_repeat|Simple_repeat	-18921	NM_133659	13876	Mm.164531	NM_133659	ENSMUSG00000040732	Erg	D030036I24Rik	avian erythroblastosis virus E-26 (v-ets) oncogene related	protein-coding
common_peak2-22496-33-44--0.160515533804146-0.342407020751092	chr13	51651084	51652192	+	0	NA	intron (NM_009167, intron 1 of 11)	Lx8|LINE|L1	10815	NM_009167	20418	Mm.131870	NM_009167	ENSMUSG00000021448	Shc3	N-Shc|Rai|ShcC	src homology 2 domain-containing transforming protein C3	protein-coding
common_peak2-29434-35-42-0.00510550376040619-0.30358472802154	chr6	13069526	13070662	+	0	NA	Intergenic	L1MC2|LINE|L1	50335	NM_027992	71900	Mm.27742	NM_027992	ENSMUSG00000029571	Tmem106b	2310036D22Rik|5830455K21Rik|6430519M21Rik|AI428776|AI661344	transmembrane protein 106B	protein-coding
common_peak2-23976-57-72-0.0762084811989112-0.337470937500802	chr16	17721869	17723275	+	0	NA	intron (NM_001285886, intron 1 of 16)	intron (NM_001285886, intron 1 of 16)	421	NM_001285886	94112	Mm.208970	NM_033609	ENSMUSG00000012114	Med15	A230074L19Rik|AW536074|Pcqap|mPcqap	mediator complex subunit 15	protein-coding
common_peak2-29591-21-29--0.337401330342283-0.403610417161439	chr6	50395641	50396423	+	0	NA	intron (NM_001163645, intron 1 of 21)	L2b|LINE|L2	10137	NM_001163645	71720	Mm.44153	NM_027881	ENSMUSG00000029822	Osbpl3	1200014M06Rik|6720421I08Rik|A530055M08|ORP3|OSBP3	oxysterol binding protein-like 3	protein-coding
common_peak1-11183-17-15-0.218296338205038-0.403453972741633	chr15	76874037	76874824	+	0	NA	intron (NM_013593, intron 1 of 3)	RLTR18B|LTR|ERVK	-1075	NM_001163621	71939	Mm.34173	NM_028010	ENSMUSG00000033576	Apol6	2310076O14Rik	apolipoprotein L 6	protein-coding
unique_peak2-37222-9-23--1.39534909431694-1.67711336403294	chr4	88762996	88763506	+	0	NA	Intergenic	Intergenic	-20023	NM_024433	66902	Mm.28500	NM_024433	ENSMUSG00000062937	Mtap	1300019I21Rik|MSAP	methylthioadenosine phosphorylase	protein-coding
common_peak2-26593-14-22--0.624345795699369-0.590343908676233	chr2	112239318	112239956	+	0	NA	intron (NM_024254, intron 1 of 9)	L1MB8|LINE|L1	20269	NM_024254	72425	Mm.425091	NM_024254	ENSMUSG00000027132	Katnbl1	2410042D21Rik|AA166487|AA473307|AI467442	katanin p80 subunit B like 1	protein-coding
unique_peak1-5326-6-5--0.0195643903408542-0.947717972411649	chr5	81224714	81225232	+	0	NA	Intergenic	Intergenic	-225645	NM_198702	319387	Mm.273631	NM_198702	ENSMUSG00000037605	Lphn3	5430402I23Rik|CIRL-3|D130075K09Rik|Gm1379|LEC3|mKIAA0768	latrophilin 3	protein-coding
common_peak2-31847-18-26--0.441968350935117-0.471456499375593	chr9	45984144	45985065	+	0	NA	intron (NM_027498, intron 4 of 24)	B3A|SINE|B2	-52109	NM_009692	11806	Mm.26743	NM_009692	ENSMUSG00000032083	Apoa1	Alp-1|Apoa-1|Brp-14|Ltw-1|Lvtw-1|Sep-1|Sep-2|Sep2|apo-AI|apoA-I	apolipoprotein A-I	protein-coding
common_peak2-24305-45-82--0.514681406002053-1.19886391578317	chr17	29032121	29033391	+	0	NA	TTS (NM_172450)	TTS (NM_172450)	-9454	NR_045457	74179	Mm.248931	NR_045457	ENSMUSG00000085333	1700030A11Rik	-	RIKEN cDNA 1700030A11 gene	ncRNA
common_peak2-27402-7-8--0.370834171144123-1.00793137938329	chr3	88335829	88336280	+	0	NA	promoter-TSS (NM_001029890)	promoter-TSS (NM_001029890)	-263	NM_001029890	72640	Mm.275154	NM_001029890	ENSMUSG00000074480	Mex3a	2700083E18Rik|Gm411|Rkhd4	mex3 homolog A (C. elegans)	protein-coding
common_peak2-28870-16-14-0.211373046659543-0.364171515310935	chr5	76588670	76589223	+	0	NA	Intergenic	Intergenic	19648	NM_020611	57357	Mm.289446	NM_020611	ENSMUSG00000029233	Srd5a3	1110025P14Rik|A430076C09|AV364670|AW987574|D730040M03Rik|H5ar|S5AR 3|Srd5a2l	steroid 5 alpha-reductase 3	protein-coding
common_peak2-31672-21-26--0.185398236897233-0.318406410381916	chr8	126829251	126830543	+	0	NA	intron (NM_139272, intron 3 of 15)	intron (NM_139272, intron 3 of 15)	74603	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
unique_peak2-35337-0-5--3.42509343119537-1.32905871926422	chr17	24037058	24037428	+	0	NA	intron (NM_001039238, intron 3 of 3)	intron (NM_001039238, intron 3 of 3)	1554	NM_001039238	630537	Mm.436677	NM_001039238	ENSMUSG00000096278	Dcpp2	Dcpp-2|EG630537|SPT-2	demilune cell and parotid protein 2	protein-coding
unique_peak2-35129-7-24--1.84476535947653-2.44150343356329	chr16	30008375	30009053	+	0	NA	promoter-TSS (NR_033631)	promoter-TSS (NR_033631)	-39	NR_033631	100043102	Mm.30797	NR_033631	ENSMUSG00000097184	4632428C04Rik	Gm4231	RIKEN cDNA 4632428C04 gene	ncRNA
unique_peak2-38241-5-10--1.16381195464315-1.33892459842472	chr6	120916447	120916836	+	0	NA	intron (NM_001270475, intron 22 of 31)	MTA_Mm|LTR|MaLR	-49803	NM_007544	12122	Mm.235081	NM_007544	ENSMUSG00000004446	Bid	2700049M22Rik|AI875481|AU022477	BH3 interacting domain death agonist	protein-coding
unique_peak1-6599-14-4-1.57728806547028-2.4322161449009	chr7	145159794	145160428	+	0	NA	Intergenic	ID_B1|SINE|B4	429302	NM_183289	70571	Mm.334297	NM_183289	ENSMUSG00000091002	Tcerg1l	5730476P14Rik	transcription elongation regulator 1-like	protein-coding
unique_peak1-1752-11-3-1.50869358425161-1.95434855131066	chr13	108045667	108046270	+	0	NA	Intergenic	Intergenic	-213934	NR_045083	105120	Mm.417700	NR_045083		AI197445	-	expressed sequence AI197445	ncRNA
common_peak2-31921-12-21--0.810655633549659-0.713635438203849	chr9	62121730	62122639	+	0	NA	intron (NM_025721, intron 1 of 1)	Lx4B|LINE|L1	7802	NM_025721	66712	Mm.263615	NM_025721	ENSMUSG00000046846	Spesp1	4921508E09Rik|AI428149	sperm equatorial segment protein 1	protein-coding
unique_peak2-33919-8-11--0.579740082773585-1.14218153353838	chr12	69447946	69448504	+	0	NA	Intergenic	Intergenic	-677967	NR_033146	100316870	Mm.379794	NR_033146		Gm17821	-	DDB1 and CUL4 associated factor 5 pseudogene	pseudo
common_peak1-8908-24-19-0.471281807880354-0.677583764578261	chr11	50325931	50326817	+	0	NA	Intergenic	Intergenic	-81761	NM_172557	216724	Mm.390400	NM_172557	ENSMUSG00000020375	Rufy1	3000002E04Rik|Rabip4|ZFYVE12	RUN and FYVE domain containing 1	protein-coding
common_peak1-13079-8-9--0.316705676939792-1.03275496310833	chr19	6871922	6872526	+	0	NA	Intergenic	Intergenic	32210	NR_039555	100628576		NR_039555		Mir5046	mmu-mir-5046|mu-mir-5046	microRNA 5046	ncRNA
common_peak2-23386-13-15--0.221527969362231-0.308519316180257	chr15	58033745	58034452	+	0	NA	intron (NM_026346, intron 4 of 8)	intron (NM_026346, intron 4 of 8)	12349	NM_026346	67731	Mm.25683	NM_026346	ENSMUSG00000022358	Fbxo32	4833442G10Rik|AI430017|ATROGIN1|Gm20361|MAFbx	F-box protein 32	protein-coding
common_peak1-8042-82-96-0.293350302118607-0.836336959074592	chr1	171328558	171330657	+	0	NA	Intergenic	L1ME2z|LINE|L1	131988	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
unique_peak2-36141-5-17--1.87430533744817-1.80287260729378	chr2	18049199	18049942	+	0	NA	intron (NR_045538, intron 8 of 22)	intron (NR_045538, intron 8 of 22)	63358	NM_001252561	17354	Mm.209175	NM_010804	ENSMUSG00000026743	Mllt10	Af10|B130021D15Rik|D630001B22Rik|mKIAA4140	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	protein-coding
unique_peak2-33878-2-5--1.50241675698448-1.08602067057793	chr12	29290367	29290699	+	0	NA	intron (NM_027866, intron 3 of 6)	intron (NM_027866, intron 3 of 6)	17622	NM_027866	71693	Mm.30724	NM_027866	ENSMUSG00000036655	Colec11	1010001H16Rik	collectin sub-family member 11	protein-coding
common_peak1-18183-13-9-0.456543935750406-0.53895475198017	chr8	18767661	18768256	+	0	NA	intron (NM_173189, intron 12 of 13)	intron (NM_173189, intron 12 of 13)	-26396	NM_007426	11601	Mm.439874	NM_007426	ENSMUSG00000031465	Angpt2	Agpt2|Ang-2|Ang2	angiopoietin 2	protein-coding
common_peak2-30285-26-12-1.22745937401737-2.03163221100073	chr7	19012079	19012627	+	0	NA	intron (NM_054063, intron 3 of 4)	intron (NM_054063, intron 3 of 4)	5051	NM_054063	114871	Mm.362025	NM_054063	ENSMUSG00000030373	Psg28	cea16	pregnancy-specific glycoprotein 28	protein-coding
common_peak1-17888-9-9--0.132314688483142-1.03275496310833	chr7	118705262	118705780	+	0	NA	intron (NM_173739, intron 3 of 10)	intron (NM_173739, intron 3 of 10)	217970	NM_173739	233733	Mm.323322	NM_173739	ENSMUSG00000038296	Galnt18	2900011G21Rik|BC024988|Galntl4	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 18	protein-coding
common_peak2-31456-8-11--0.579740082773585-1.14218153353838	chr8	105344931	105345526	+	0	NA	Intergenic	Intergenic	-36217	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
unique_peak2-32471-2-7--1.91745425626332-1.45399745587252	chr1	31018596	31019079	+	0	NA	Intergenic	L1Md_A|LINE|L1	-12237	NM_011200	19243	Mm.491181	NM_011200	ENSMUSG00000026064	Ptp4a1	AA415290|AU019864|C130021B01|Prl-1	protein tyrosine phosphatase 4a1	protein-coding
common_peak2-26365-24-17-0.623284901325404-0.890873221665474	chr2	38823860	38824556	+	0	NA	Intergenic	L1_Rod|LINE|L1	-29621	NM_029687	76646	Mm.358777	NM_029687	ENSMUSG00000035295	Wdr38	1700123D08Rik	WD repeat domain 38	protein-coding
common_peak2-27342-12-10-0.189344366450341-0.386243247519795	chr3	75938806	75939495	+	0	NA	intron (NM_001253719, intron 1 of 15)	intron (NM_001253719, intron 1 of 15)	59645	NM_001253719	213262	Mm.379337	NM_178673	ENSMUSG00000034098	Fstl5	9130207J01Rik	follistatin-like 5	protein-coding
unique_peak1-2876-19-6-1.59533240460408-2.21753093801298	chr17	36237277	36237950	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	11008	NM_001271005	667803	Mm.477808	NM_001271005		C920025E04Rik	-	RIKEN cDNA C920025E04 gene	protein-coding
common_peak2-27693-17-27--0.589058583852566-0.604689589251113	chr3	121602360	121603261	+	0	NA	Intergenic	Intergenic	-53434	NM_172525	214137	Mm.229287	NM_172525	ENSMUSG00000039831	Arhgap29	6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1	Rho GTPase activating protein 29	protein-coding
common_peak2-27348-10-9-0.0344872501214071-1.05503135781948	chr3	79153745	79154100	+	0	NA	intron (NM_001142953, intron 1 of 4)	L1MC3|LINE|L1	4624	NM_001142953	100233207	Mm.373801	NM_001142953	ENSMUSG00000091685	Gm17359	-	predicted gene, 17359	protein-coding
unique_peak1-852-9-5-0.604650905683064-1.21398586181642	chr11	20237086	20237782	+	0	NA	Intergenic	Intergenic	-4718	NM_018861	55963	Mm.6379	NM_018861	ENSMUSG00000020142	Slc1a4	ASCT-1|ASCT1|AW045657|SATT	solute carrier family 1 (glutamate/neutral amino acid transporter), member 4	protein-coding
common_peak2-31768-10-10--0.103016273628528-0.301029995663987	chr9	21715015	21715597	+	0	NA	intron (NM_031874, intron 4 of 4)	RMER12|LTR|ERVK	7259	NM_031874	19340	Mm.260157	NM_031874	ENSMUSG00000019066	Rab3d	C130057E11Rik	RAB3D, member RAS oncogene family	protein-coding
unique_peak2-35507-1-6--2.43441193227435-1.56314192529759	chr17	46951104	46951494	+	0	NA	intron (NM_001100452, intron 4 of 10)	intron (NM_001100452, intron 4 of 10)	17063	NM_001100452	210982	Mm.37642	NM_001100452	ENSMUSG00000036568	Gltscr1l	mKIAA0240	GLTSCR1-like	protein-coding
unique_peak2-36932-2-6--1.72480917832092-1.26211192963361	chr3	102659478	102659899	+	0	NA	intron (NM_011516, intron 24 of 32)	L1_Mus1|LINE|L1	-73051	NM_001165940	22094	Mm.110730	NM_009432	ENSMUSG00000027857	Tshb	-	thyroid stimulating hormone, beta subunit	protein-coding
unique_peak2-36549-0-7--3.84013093047421-1.80617997398389	chr2	166030394	166030746	+	0	NA	Intergenic	(TCCC)n|Simple_repeat|Simple_repeat	-49387	NM_028072	72043	Mm.1011	NM_028072	ENSMUSG00000006800	Sulf2	2010004N24Rik|AU020235|MSulf-2|mKIAA1247	sulfatase 2	protein-coding
common_peak1-8932-91-83-0.681114522823577-3.02059385864801	chr11	52359338	52361972	+	0	NA	Intergenic	MamRep434|DNA|TcMar	150725	NM_153117	213673	Mm.291979	NM_153117	ENSMUSG00000036275	9530068E07Rik	C85061|Kct2	RIKEN cDNA 9530068E07 gene	protein-coding
common_peak2-25496-15-18--0.235762762887929-0.326591483156968	chr19	5388169	5388661	+	0	NA	promoter-TSS (NR_033224)	promoter-TSS (NR_033224)	79	NR_033224	414115	Mm.483102	NR_033224		D330050I16Rik	-	RIKEN cDNA D330050I16 gene	ncRNA
common_peak2-26260-11-11--0.0762689164695427-0.301029995663976	chr2	30319316	30320035	+	0	NA	Intergenic	MLT1I|LTR|MaLR	10044	NM_030244	72500	Mm.295464	NM_030244	ENSMUSG00000089762	Ier5l	2610524G09Rik	immediate early response 5-like	protein-coding
common_peak1-12821-8-9--0.316705676939792-1.03275496310833	chr18	67985878	67986394	+	0	NA	intron (NM_027556, intron 14 of 45)	intron (NM_027556, intron 14 of 45)	26375	NM_027556	70799	Mm.30857	NM_027556	ENSMUSG00000024542	Cep192	4631422C13Rik|D430014P18Rik	centrosomal protein 192	protein-coding
unique_peak2-35542-3-6--1.22133801201688-1.08602067057793	chr17	56990350	56990785	+	0	NA	intron (NM_001039114, intron 8 of 14)	A-rich|Low_complexity|Low_complexity	-20136	NM_027787	19725	Mm.102	NM_009056	ENSMUSG00000024206	Rfx2	5430432H19Rik	regulatory factor X, 2 (influences HLA class II expression)	protein-coding
unique_peak1-3206-9-6-0.382258484346616-1.11707584880836	chr18	56716393	56716945	+	0	NA	intron (NM_138600, intron 3 of 17)	intron (NM_138600, intron 3 of 17)	5283	NM_138600	110695	Mm.30250	NM_138600		Aldh7a1	Atq1|D18Wsu181e	aldehyde dehydrogenase family 7, member A1	protein-coding
unique_peak2-38965-4-7--1.02346051385325-1.09384600808989	chr8	34108083	34108480	+	0	NA	Intergenic	Intergenic	-47783	NM_001177589	100042715	Mm.291093	NM_001177589		Gm3985	-	predicted gene 3985	protein-coding
common_peak2-23881-17-41--1.17402108457372-2.09421125609714	chr16	17890893	17891710	+	0	NA	intron (NM_010048, intron 1 of 9)	CpG	520	NM_010048	13356	Mm.254515	NM_010048	ENSMUSG00000003166	Dgcr2	9930034O06Rik|DGS-C|Dgsc|Idd|Lan|Sez12|mKIAA0163	DiGeorge syndrome critical region gene 2	protein-coding
common_peak1-14022-76-84-0.35255344972558-1.006206825038	chr2	113440082	113442250	+	0	NA	intron (NM_010230, intron 14 of 19)	intron (NM_010230, intron 14 of 19)	-84081	NM_001287818	14260	Mm.4938	NM_010230	ENSMUSG00000044042	Fmn1	Fmn|ld	formin 1	protein-coding
common_peak1-7983-12-10-0.189344366450341-0.386243247519795	chr1	160311980	160312662	+	0	NA	intron (NM_001205204, intron 1 of 22)	intron (NM_001205204, intron 1 of 22)	19886	NM_001205204	11899	Mm.329586	NM_007495	ENSMUSG00000026587	Astn1	Astn|GC14|mKIAA0289	astrotactin 1	protein-coding
common_peak1-8742-15-26--0.742722751607812-0.823046386575433	chr11	4135048	4135740	+	0	NA	Intergenic	Intergenic	-1394	NM_001013365	18413	Mm.131422	NM_001013365	ENSMUSG00000058755	Osm	OncoM	oncostatin M	protein-coding
common_peak1-13156-14-2-2.31425365963649-3.28500101358144	chr19	10563994	10564570	+	0	NA	Intergenic	RMER15|LTR|ERVL	-6895	NM_133689	67752	Mm.25939	NM_133689	ENSMUSG00000035179	Ppp1r32	4930579J09Rik|AU015816|IIIG9|IIIG9L|IIIG9S	protein phosphatase 1, regulatory subunit 32	protein-coding
common_peak1-11587-27-14-1.08465535528672-1.87214134458703	chr16	16223420	16224468	+	0	NA	intron (NM_026163, intron 1 of 12)	intron (NM_026163, intron 1 of 12)	10506	NM_026163	67451	Mm.2252	NM_026163	ENSMUSG00000041957	Pkp2	1200008D14Rik|1200012P04Rik|AA516617|Pkp2l	plakophilin 2	protein-coding
common_peak1-18385-14-12-0.198776442216552-0.373562084705529	chr8	70879970	70880649	+	0	NA	TTS (NM_001252623)	TTS (NM_001252623)	-12049	NR_038189	73609	Mm.443247	NR_038181	ENSMUSG00000085197	1700125H03Rik	4930510D22Rik	RIKEN cDNA 1700125H03 gene	ncRNA
common_peak2-23687-7-12--0.901348887842903-1.31827279259406	chr15	86067615	86068194	+	0	NA	intron (NM_145476, intron 3 of 12)	ORR1C1|LTR|MaLR	23015	NM_145476	223754	Mm.28904	NM_145476	ENSMUSG00000051864	Tbc1d22a	BC023106|D15Ertd781e	TBC1 domain family, member 22a	protein-coding
unique_peak1-2005-7-2-1.21412832957703-1.45399745587252	chr15	3271623	3272085	+	0	NA	intron (NM_001286370, intron 9 of 10)	B3A|SINE|B2	-18328	NM_001166063	100039139	Mm.455610	NM_001166063	ENSMUSG00000091119	Ccdc152	ENSMUSG00000071814	coiled-coil domain containing 152	protein-coding
common_peak2-22142-5-6--0.511735258063458-0.947717972411649	chr12	86000527	86000852	+	0	NA	Intergenic	B3|SINE|B2	16843	NM_001033776	432677	Mm.311913	NM_001033776	ENSMUSG00000071235	Vrtn	7420416P09Rik	vertebrae development associated	protein-coding
unique_peak2-35775-7-8--0.370834171144123-1.00793137938329	chr18	46958824	46959277	+	0	NA	Intergenic	Intergenic	-50643	NM_029008	74574	Mm.26379	NM_029008	ENSMUSG00000024481	4833403I15Rik	Aqpep|Lvrn	RIKEN cDNA 4833403I15 gene	protein-coding
common_peak2-22724-20-32--0.55631933476726-0.705485015404196	chr13	106936171	106937142	+	0	NA	Intergenic	L1MA4A|LINE|L1	702883	NM_008308	15550	Mm.4716	NM_008308	ENSMUSG00000021721	Htr1a	Gpcr18	5-hydroxytryptamine (serotonin) receptor 1A	protein-coding
common_peak1-19128-11-26--1.24619391791185-1.66030262873422	chr9	78448196	78448828	+	0	NA	Intergenic	Intergenic	-12660	NM_001276452	235504	Mm.46932	NM_172773	ENSMUSG00000049624	Slc17a5	4631416G20Rik|4732491M05|AST|ISSD|NSD|SD|SIALIN|SIASD|SLD	solute carrier family 17 (anion/sugar transporter), member 5	protein-coding
unique_peak2-37062-0-6--3.64748585253182-1.56314192529759	chr3	140973697	140974095	+	0	NA	Intergenic	Intergenic	-98577	NM_008811	18598	Mm.4223	NM_008811	ENSMUSG00000047674	Pdha2	Pdhal	pyruvate dehydrogenase E1 alpha 2	protein-coding
common_peak2-21606-24-41--0.599107520011044-0.83607543869935	chr11	99385810	99386987	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-3826	NM_213730	237934	Mm.484091	NM_213730	ENSMUSG00000064165	Krt39	4732494G06Rik|Ka35	keratin 39	protein-coding
common_peak1-14449-23-22-0.198205548452068-0.373496418836697	chr3	65928875	65929983	+	0	NA	intron (NM_145820, intron 10 of 13)	intron (NM_145820, intron 10 of 13)	-94380	NM_008987	19288	Mm.276776	NM_008987	ENSMUSG00000027832	Ptx3	AI607804|TSG-14	pentraxin related gene	protein-coding
unique_peak1-4508-8-0-3.00522241794757-2.70926996097583	chr3	22033731	22034075	+	0	NA	intron (NM_030732, intron 1 of 15)	Lx|LINE|L1	58329	NM_030732	81004	Mm.202966	NM_030732	ENSMUSG00000027630	Tbl1xr1	8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1	transducin (beta)-like 1X-linked receptor 1	protein-coding
common_peak1-8586-53-59-0.23408241680741-0.54190507803362	chr10	99263417	99264966	+	0	NA	Intergenic	PB1D10|SINE|Alu	-41899	NM_027945	71832	Mm.483162	NM_027945	ENSMUSG00000046934	Csl	1700007H16Rik	citrate synthase like	protein-coding
unique_peak2-32825-9-10--0.269818212233077-1.05503135781948	chr1	189566854	189567313	+	0	NA	intron (NM_001243792, intron 1 of 7)	(CA)n|Simple_repeat|Simple_repeat	134198	NM_001243792	26381	Mm.89989	NM_011935	ENSMUSG00000026610	Esrrg	ERR3|Errg|NR3B3|mKIAA0832	estrogen-related receptor gamma	protein-coding
unique_peak1-5208-14-1-2.89921616035764-3.91338994363176	chr5	35750619	35751441	+	0	NA	Intergenic	(TCTG)n|Simple_repeat|Simple_repeat	19264	NM_010445	15371	Mm.358606	NM_010445	ENSMUSG00000067438	Hmx1	Nkx5-3	H6 homeobox 1	protein-coding
common_peak1-15482-13-9-0.456543935750406-0.53895475198017	chr4	108578648	108579248	+	0	NA	intron (NM_023537, intron 2 of 4)	intron (NM_023537, intron 2 of 4)	27273	NM_023537	69908	Mm.41580	NM_023537	ENSMUSG00000003411	Rab3b	2610528C18Rik	RAB3B, member RAS oncogene family	protein-coding
common_peak2-19625-23-29--0.185123091099438-0.336580821310529	chr1	37719275	37720217	+	0	NA	intron (NM_028096, intron 1 of 9)	intron (NM_028096, intron 1 of 9)	56910	NM_028096	72097	Mm.142607	NM_028096	ENSMUSG00000026090	2010300C02Rik	-	RIKEN cDNA 2010300C02 gene	protein-coding
unique_peak2-32627-1-7--2.62705701021674-1.80617997398389	chr1	120236080	120236488	+	0	NA	Intergenic	PB1D9|SINE|Alu	17864	NM_026472	67949	Mm.280311	NM_026472	ENSMUSG00000026377	Nifk	AI852665|C130020J04Rik|Mki67ip	nucleolar protein interacting with the FHA domain of MKI67	protein-coding
common_peak2-20861-39-37-0.367833733475568-0.665814527695537	chr11	93994348	93995200	+	0	NA	Intergenic	Intergenic	-77994	NM_009427	22057	Mm.259673	NM_009427	ENSMUSG00000037573	Tob1	Tob|Trob	transducer of ErbB-2.1	protein-coding
common_peak2-20430-9-7-0.18961340640422-1.05908390183068	chr10	30729113	30729531	+	0	NA	Intergenic	Intergenic	-166733	NM_013904	15214	Mm.103573	NM_013904	ENSMUSG00000019789	Hey2	CHF1|Herp1|Hrt2|bHLHb32|hesr2	hairy/enhancer-of-split related with YRPW motif 2	protein-coding
common_peak2-24457-17-33--0.869166503045301-1.12969433525548	chr17	23771020	23771893	+	0	NA	intron (NM_001033339, intron 4 of 9)	intron (NM_001033339, intron 4 of 9)	10780	NM_001033339	240047	Mm.235343	NM_001033339	ENSMUSG00000023903	Mmp25	F730048C11Rik|Leukolysin|MMP20|MT6-MMP	matrix metallopeptidase 25	protein-coding
common_peak1-17227-71-57-0.786463183592399-2.89136065999138	chr6	126920367	126922358	+	0	NA	intron (NM_138594, intron 11 of 13)	PB1D7|SINE|Alu	31378	NM_138594	28040	Mm.44228	NM_138594	ENSMUSG00000030347	D6Wsu163e	C12orf4	DNA segment, Chr 6, Wayne State University 163, expressed	protein-coding
common_peak2-27484-38-55--0.235902262759073-0.404412720632912	chr3	94581472	94583003	+	0	NA	intron (NM_001037711, intron 3 of 20)	intron (NM_001037711, intron 3 of 20)	8200	NM_001293727	70737	Mm.87634	NM_001037711	ENSMUSG00000068876	Cgn	6330408J11Rik	cingulin	protein-coding
common_peak1-19164-11-8-0.338768582809301-1.14218153353838	chr9	95844825	95845315	+	0	NA	intron (NM_019864, intron 42 of 46)	ORR1A2|LTR|MaLR	-10109	NM_011916	24127	Mm.291179	NM_011916	ENSMUSG00000032410	Xrn1	Dhm2|exo|mXrn1	5'-3' exoribonuclease 1	protein-coding
common_peak1-13245-84-26-2.18004655672556-14.9799418650401	chr19	30123420	30126278	+	0	NA	intron (NM_144873, intron 2 of 15)	intron (NM_144873, intron 2 of 15)	19846	NM_144873	109113	Mm.313364	NM_144873	ENSMUSG00000024817	Uhrf2	2310065A22Rik|AI426270|AW214556|D130071B19Rik|Nirf	ubiquitin-like, containing PHD and RING finger domains 2	protein-coding
common_peak2-26230-20-25--0.212364933549899-0.342639663781856	chr2	27675862	27677281	+	0	NA	Intergenic	Intergenic	-65374	NM_015734	12831	Mm.7281	NM_015734	ENSMUSG00000026837	Col5a1	AI413331	collagen, type V, alpha 1	protein-coding
common_peak2-28746-24-24-0.149353712992992-0.367910579842133	chr5	38039189	38039927	+	0	NA	intron (NM_022416, intron 2 of 11)	intron (NM_022416, intron 2 of 11)	68834	NM_022416	64293	Mm.103714	NM_022416	ENSMUSG00000029123	Stk32b	2510009F08Rik|STKG6|Stk32|YANK2	serine/threonine kinase 32B	protein-coding
common_peak1-10202-33-87--1.12809405611177-4.16934151452139	chr13	46929700	46930646	+	0	NA	intron (NM_010617, intron 4 of 37)	intron (NM_010617, intron 4 of 37)	94914	NM_010617	16553	Mm.342703	NM_010617	ENSMUSG00000021375	Kif13a	4930505I07Rik|mKIAA4109	kinesin family member 13A	protein-coding
unique_peak1-3796-18-1-3.31291915122835-4.8766546284749	chr19	57358102	57358816	+	0	NA	Intergenic	Intergenic	10009	NR_045319	78120	Mm.445892	NR_045319		4930449E18Rik	-	RIKEN cDNA 4930449E18 gene	ncRNA
unique_peak2-35275-3-6--1.22133801201688-1.08602067057793	chr17	4867716	4868089	+	0	NA	Intergenic	Intergenic	-127172	NM_001085355	239985	Mm.133401	NM_001085355	ENSMUSG00000069729	Arid1b	8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235	AT rich interactive domain 1B (SWI-like)	protein-coding
unique_peak1-960-9-1-2.18961340640422-2.31132995230379	chr11	60208668	60209142	+	0	NA	Intergenic	Lx8|LINE|L1	21696	NM_145427	246782	Mm.41651	NM_145427	ENSMUSG00000042709	Atpaf2	ATP12|ATP12p	ATP synthase mitochondrial F1 complex assembly factor 2	protein-coding
unique_peak2-35467-3-12--2.11442280810037-2.15846853396659	chr17	43219418	43219870	+	0	NA	intron (NM_178589, intron 4 of 5)	intron (NM_178589, intron 4 of 5)	66140	NM_178589	94185	Mm.200792	NM_178589	ENSMUSG00000023915	Tnfrsf21	AA959878|DR6|R74815|TR7	tumor necrosis factor receptor superfamily, member 21	protein-coding
common_peak2-24810-24-24-0.149353712992992-0.367910579842133	chr17	70738518	70739286	+	0	NA	Intergenic	Intergenic	-35230	NM_177639	224997	Mm.311840	NM_027712	ENSMUSG00000003279	Dlgap1	4933422O14Rik|9630002F18|AI845682|AI848168|BB075781|D17Bwg0511e|GKAP/SAPAP|GKPA/SAPAP|Gkap|Sapap1|mKIAA4162	discs, large (Drosophila) homolog-associated protein 1	protein-coding
common_peak1-14721-56-73-0.0261424598102931-0.306899018650293	chr3	81036103	81037239	+	0	NA	Intergenic	Intergenic	196333	NM_019971	54635	Mm.331089	NM_019971	ENSMUSG00000028019	Pdgfc	1110064L01Rik|AI647969|PDGF-C	platelet-derived growth factor, C polypeptide	protein-coding
unique_peak1-1492-19-6-1.59533240460408-2.21753093801298	chr13	52821225	52822208	+	0	NA	Intergenic	L1M4c|LINE|L1	30858	NR_027893	105404	Mm.184173	NR_027893		BB123696	-	expressed sequence BB123696	ncRNA
common_peak2-22459-21-30--0.384707045120639-0.446094173747089	chr13	44733460	44734362	+	0	NA	Intergenic	Intergenic	-92232	NM_021878	16468	Mm.25059	NM_021878	ENSMUSG00000038518	Jarid2	Jmj|jumonji	jumonji, AT rich interactive domain 2	protein-coding
unique_peak2-39547-8-7-0.00522241794757061-1.00793137938329	chr9	69455288	69455733	+	0	NA	Intergenic	Intergenic	150759	NR_037296	100526560		NR_037296	miRBase:MI0014106	Mir3109	mmu-mir-3109	microRNA 3109	ncRNA
common_peak1-13531-31-47--0.359723829908033-0.560152715697887	chr2	157367400	157368540	+	0	NA	Intergenic	Intergenic	-17844	NM_001291129	18111	Mm.34330	NM_010923	ENSMUSG00000067786	Nnat	5730414I02Rik|AW107673|Peg5	neuronatin	protein-coding
unique_peak1-5917-13-6-0.971117108580164-1.01572999746118	chr6	88971991	88972703	+	0	NA	Intergenic	Intergenic	-73762	NM_175017	232217	Mm.281744	NM_175017	ENSMUSG00000055403	4933427D06Rik	-	RIKEN cDNA 4933427D06 gene	protein-coding
common_peak2-22982-54-64-0.15071794860128-0.403275945635944	chr14	55642910	55644139	+	0	NA	TTS (NM_026890)	TTS (NM_026890)	9233	NM_026890	68966	Mm.21214	NM_026890	ENSMUSG00000022204	Ngdn	1500001L15Rik|Ngd|neuroguidin	neuroguidin, EIF4E binding protein	protein-coding
common_peak1-10585-96-155--0.11935100450692-0.388925468300967	chr14	27428550	27429879	+	0	NA	intron (NM_145969, intron 11 of 17)	intron (NM_145969, intron 11 of 17)	-28469	NM_007479	11843	Mm.297768	NM_007479	ENSMUSG00000021877	Arf4	AA407803	ADP-ribosylation factor 4	protein-coding
unique_peak2-38374-5-12--1.40482005414695-1.62698961692433	chr7	13009433	13010101	+	0	NA	Intergenic	Intergenic	-1927	NM_001033820	619331	Mm.361832	NM_001033820	ENSMUSG00000034071	Zfp551	9630004E07Rik|Znf551	zinc fingr protein 551	protein-coding
unique_peak2-32777-3-6--1.22133801201688-1.08602067057793	chr1	177708452	177708857	+	0	NA	intron (NM_029453, intron 15 of 27)	L1_Mur3|LINE|L1	79930	NM_029453	75820	Mm.50361	NM_029453	ENSMUSG00000026523	Wdr64	4930415O10Rik|4930511H01Rik	WD repeat domain 64	protein-coding
common_peak2-22501-21-9-1.24756117037887-1.83731222263754	chr13	51963746	51964116	+	0	NA	Intergenic	Intergenic	21887	NM_011817	23882	Mm.281298	NM_011817	ENSMUSG00000021453	Gadd45g	AI327420|C86281|CR6|DDIT2|OIG37	growth arrest and DNA-damage-inducible 45 gamma	protein-coding
unique_peak2-33944-5-16--1.79184317725619-1.61682445937017	chr12	75669804	75670293	+	0	NA	Intergenic	IAP-d-int|LTR|ERVK	271587	NM_198866	386753	Mm.341686	NM_198866	ENSMUSG00000029878	Dbpht2	Spot2	DNA binding protein with his-thr domain	protein-coding
common_peak2-29560-9-8-0.0196884049619079-1.03275496310833	chr6	43525449	43525737	+	0	NA	intron (NM_013861, intron 3 of 8)	intron (NM_013861, intron 3 of 8)	90581	NM_013861	29807	Mm.320979	NM_013861	ENSMUSG00000029735	Tpk1	-	thiamine pyrophosphokinase	protein-coding
unique_peak2-35858-7-5-0.214128329577033-1.01466476204226	chr18	75892123	75892476	+	0	NA	Intergenic	Intergenic	-34949	NM_201354	269037	Mm.36745	NM_201354	ENSMUSG00000052928	Ctif	Gm672	CBP80/20-dependent translation initiation factor	protein-coding
unique_peak1-1608-9-2-1.60465090568306-1.87199725847353	chr13	38657973	38658435	+	0	NA	Intergenic	Intergenic	-37511	NM_001289598	105245	Mm.28622	NM_145367	ENSMUSG00000038991	Txndc5	AL022641|ERp46|PC-TRP	thioredoxin domain containing 5	protein-coding
common_peak2-28385-7-6--0.00826409175941478-0.97990265578305	chr4	139231507	139231798	+	0	NA	Intergenic	Intergenic	22199	NM_031873	83770	Mm.190612	NM_031873	ENSMUSG00000028738	Tas1r2	Gpr71|T1r2|TR2	taste receptor, type 1, member 2	protein-coding
unique_peak1-5974-10-0-3.35641534500877-3.31132995230379	chr6	94779896	94780456	+	0	NA	Intergenic	Intergenic	-113652	NR_040761	78773	Mm.67065	NR_040761		4930511E03Rik	-	RIKEN cDNA 4930511E03 gene	ncRNA
unique_peak2-39033-9-22--1.33394854965279-1.52222891542741	chr8	64806672	64807498	+	0	NA	Intergenic	MMERVK10C-int|LTR|ERVK	-205095	NM_011922	26359	Mm.42179	NM_011922	ENSMUSG00000031635	Anxa10	-	annexin A10	protein-coding
common_peak1-19172-56-34-1.10631280849428-3.73368918132414	chr9	96719103	96720428	+	0	NA	Intergenic	Intergenic	53784	NR_102296	319707	Mm.392191	NR_102293		C430002N11Rik	-	RIKEN cDNA C430002N11 gene	ncRNA
unique_peak1-2534-17-8-1.04837133676273-1.30305656033811	chr16	21285644	21286485	+	0	NA	intron (NR_046162, intron 1 of 4)	intron (NR_046162, intron 1 of 4)	10881	NR_046162	328646	Mm.404748	NR_046162	ENSMUSG00000096918	Gm16863	A830060N17	predicted gene, 16863	ncRNA
common_peak1-16354-86-135--0.111827047217986-0.368433880310474	chr5	121544971	121546372	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-86144	NM_011286	19894	Mm.181166	NM_011286	ENSMUSG00000029608	Rph3a	2900002P20Rik|AU022689|AW108370	rabphilin 3A	protein-coding
common_peak2-28757-22-20-0.254966682308644-0.421916810733237	chr5	43354691	43355583	+	0	NA	Intergenic	Intergenic	-269565	NM_175937	231207	Mm.7233	NM_175937	ENSMUSG00000039782	Cpeb2	A630055H10Rik|Cpe-bp2	cytoplasmic polyadenylation element binding protein 2	protein-coding
unique_peak2-33687-2-6--1.72480917832092-1.26211192963361	chr11	103263454	103263842	+	0	NA	intron (NM_183034, intron 2 of 11)	intron (NM_183034, intron 2 of 11)	10330	NM_183034	353047	Mm.383308	NM_183034	ENSMUSG00000034247	Plekhm1	AP162|B2|BC038943|D330036J23Rik	pleckstrin homology domain containing, family M (with RUN domain) member 1	protein-coding
unique_peak2-38924-3-13--2.22133801201688-2.36932189928148	chr8	22165886	22166512	+	0	NA	TTS (NM_183253)	TTS (NM_183253)	975	NM_183253	66298	Mm.482941	NM_183253	ENSMUSG00000074447	Defa21	2010016B13Rik|Defcr21	defensin, alpha, 21	protein-coding
unique_peak2-36445-6-17--1.60452689106201-1.49151883326343	chr2	134786093	134786920	+	0	NA	intron (NM_001145830, intron 2 of 31)	intron (NM_001145830, intron 2 of 31)	174606	NM_001145830	18795	Mm.330607	NM_019677	ENSMUSG00000051177	Plcb1	3110043I21Rik|AI132408|Plcb|mKIAA0581	phospholipase C, beta 1	protein-coding
unique_peak2-37607-11-16--0.578769256998726-0.503257505534083	chr5	64159841	64160747	+	0	NA	intron (NM_177006, intron 3 of 6)	intron (NM_177006, intron 3 of 6)	-43440	NM_029554	76261	Mm.38143	NM_029554	ENSMUSG00000060512	0610040J01Rik	AI662686	RIKEN cDNA 0610040J01 gene	protein-coding
common_peak1-19196-32-45--0.244469936837353-0.394172396164276	chr9	100545193	100546367	+	0	NA	intron (NM_009282, intron 1 of 33)	intron (NM_009282, intron 1 of 33)	1738	NM_009282	20842	Mm.42135	NM_009282	ENSMUSG00000037286	Stag1	AU045003|SA-1|Scc3	stromal antigen 1	protein-coding
common_peak2-30313-32-27-0.471737097162056-0.777451270049544	chr7	24365013	24365974	+	0	NA	Intergenic	Lx4B|LINE|L1	3289	NM_001166843	100043103	Mm.480300	NM_001166843	ENSMUSG00000094602	Vmn1r169	Gm4232	vomeronasal 1 receptor 169	protein-coding
unique_peak2-32793-0-6--3.64748585253182-1.56314192529759	chr1	181231163	181231604	+	0	NA	intron (NM_027188, intron 5 of 11)	intron (NM_027188, intron 5 of 11)	216751	NM_027188	69726	Mm.222338	NM_027188		Smyd3	2410008A19Rik|Zmynd1	SET and MYND domain containing 3	protein-coding
common_peak1-8321-13-13--0.0288828914198356-0.309074325783021	chr10	43221541	43222281	+	0	NA	intron (NM_199028, intron 3 of 3)	intron (NM_199028, intron 3 of 3)	22965	NM_199028	331623	Mm.490388	NM_199028	ENSMUSG00000038214	Bend3	mKIAA1553	BEN domain containing 3	protein-coding
unique_peak2-38369-9-15--0.81038659359578-0.630231561310125	chr7	6172435	6172979	+	0	NA	Intergenic	AT_rich|Low_complexity|Low_complexity	-1173	NM_133204	170734	Mm.155595	NM_133204	ENSMUSG00000058028	Zscan5b	Zfg1|Zfp371	zinc finger and SCAN domain containing 5B	protein-coding
unique_peak1-922-9-0-3.18961340640422-3.01029995663981	chr11	50382236	50382715	+	0	NA	Intergenic	L1MA5|LINE|L1	-33112	NM_001277305	216725	Mm.110597	NM_175643	ENSMUSG00000036545	Adamts2	ADAM-TS2|ADAMTS-2|ADAMTS-3|PCINP|hPCPNI|mKIAA4060|pNPI	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 2	protein-coding
unique_peak2-33731-7-14--1.10779976531033-0.817533494790411	chr11	115902466	115903077	+	0	NA	intron (NM_172569, intron 1 of 15)	intron (NM_172569, intron 1 of 15)	11141	NM_172569	217331	Mm.297706	NM_172569	ENSMUSG00000020770	Unk	B230379M23Rik|Zc3h5|Zc3hdc5|mKIAA1753	unkempt homolog (Drosophila)	protein-coding
unique_peak1-1261-8-2-1.42025991722641-1.65811743852845	chr11	116700874	116701300	+	0	NA	intron (NM_033398, intron 4 of 5)	intron (NM_033398, intron 4 of 5)	3676	NM_033398	107817	Mm.481684	NM_033398	ENSMUSG00000056962	Jmjd6	5730436I23Rik|D11Ertd195e|PSR|PtdSerR|Ptdsr|mKIAA0585	jumonji domain containing 6	protein-coding
common_peak2-22671-10-23--1.22854715571239-1.44380006500971	chr13	97137509	97138533	+	0	NA	Intergenic	Intergenic	-20228	NM_026173	67463	Mm.86472	NM_026173	ENSMUSG00000021671	Poc5	1200014M14Rik|AV144706	POC5 centriolar protein homolog (Chlamydomonas)	protein-coding
common_peak1-11997-35-20-1.03905283568374-2.16720861012098	chr17	13492250	13493638	+	0	NA	Intergenic	Intergenic	-54494	NM_001167578	100041352	Mm.490251	NM_001167578	ENSMUSG00000052469	Tcp10c	D17Leh66C|D17Leh66ca|Gm9880|T66C-a|Tcp-10c	t-complex protein 10c	protein-coding
common_peak1-14094-73-19-2.37046691153786-14.1093426870869	chr2	124717776	124720492	+	0	NA	Intergenic	Intergenic	-174729	NM_175034	317750	Mm.330538	NM_175034	ENSMUSG00000035183	Slc24a5	F630045L20Rik|JSX|NCKX5|NCX5|Oca6	solute carrier family 24, member 5	protein-coding
unique_peak1-5557-12-2-2.06381348436648-2.79529063155376	chr5	144954574	144955101	+	0	NA	3' UTR (NM_010800, exon 2 of 2)	3' UTR (NM_010800, exon 2 of 2)	3682	NM_010800	17341	Mm.386767	NM_010800	ENSMUSG00000052271	Bhlha15	1810009C13Rik|Bhlhb8|MIST-1|Mist1	basic helix-loop-helix family, member a15	protein-coding
common_peak2-31897-17-31--0.781703661794962-0.932560489028298	chr9	57520996	57521898	+	0	NA	Intergenic	Intergenic	10015	NM_009993	13077	Mm.15537	NM_009993	ENSMUSG00000032310	Cyp1a2	CP12|Cyp1a1|P450-3	cytochrome P450, family 1, subfamily a, polypeptide 2	protein-coding
common_peak2-23512-30-49--0.474180780282851-0.734468890407008	chr15	76656133	76656932	+	0	NA	Intergenic	Lx7|LINE|L1	-7932	NM_198420	223666	Mm.322931	NM_198420	ENSMUSG00000033697	Arhgap39	9530053N22|AI843066|D15Wsu169e|Kiaa1688|Porf-2	Rho GTPase activating protein 39	protein-coding
common_peak2-21775-7-9--0.522837264589173-1.05908390183068	chr11	117199744	117200133	+	0	NA	intron (NM_001113488, intron 1 of 9)	intron (NM_001113488, intron 1 of 9)	6311	NM_001113488	53860	Mm.38450	NM_017380	ENSMUSG00000059248	Sept9	MSF1|Msf|PNUTL4|Sint1	septin 9	protein-coding
common_peak1-17870-39-60--0.314976090643733-0.542494191925768	chr7	114254139	114255011	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-4202	NM_001162940	384732	Mm.457863	NM_001162940	ENSMUSG00000062987	Gm10081	EG384732|ENSMUSG00000060503	predicted gene 10081	protein-coding
common_peak2-30608-15-21--0.447266868081641-0.448200956659578	chr7	88277794	88278595	+	0	NA	intron (NM_001004184, intron 8 of 17)	intron (NM_001004184, intron 8 of 17)	18509	NM_001004184	434203	Mm.389909	NM_001004184	ENSMUSG00000025726	Slc28a1	Cnt1	solute carrier family 28 (sodium-coupled nucleoside transporter), member 1	protein-coding
unique_peak2-37592-2-4--1.23938235115068-0.931118710592187	chr5	44137774	44138147	+	0	NA	intron (NM_001159963, intron 10 of 10)	intron (NM_001159963, intron 10 of 10)	35428	NM_001159963	242960	Mm.25794	NM_178729	ENSMUSG00000039753	Fbxl5	Fbl4|Fir4	F-box and leucine-rich repeat protein 5	protein-coding
common_peak2-27578-17-11-0.633333837483882-0.769930178837768	chr3	100333033	100333589	+	0	NA	Intergenic	Intergenic	-40196	NM_001142952	74645	Mm.226900	NM_001142952		Fam46c	4930431B09Rik|AI449797	family with sequence similarity 46, member C	protein-coding
common_peak2-22393-38-40-0.213900654680447-0.459173512026158	chr13	32927510	32928881	+	0	NA	Intergenic	Intergenic	14859	NM_025429	66222	Mm.20144	NM_025429	ENSMUSG00000044734	Serpinb1a	1190005M04Rik|AI325983|EI|EIA|ELANH2|LEI|M/NEI|MNEI|PI2	serine (or cysteine) peptidase inhibitor, clade B, member 1a	protein-coding
common_peak1-7803-12-12--0.0516637330534535-0.309718203022949	chr1	118388761	118389394	+	0	NA	intron (NM_001077425, intron 19 of 23)	L1Md_T|LINE|L1	807363	NM_001077425	636808	Mm.101576	NM_001077425	ENSMUSG00000070695	Cntnap5a	Caspr5-1|EG636808	contactin associated protein-like 5A	protein-coding
common_peak2-21433-8-7-0.00522241794757061-1.00793137938329	chr11	86573674	86574217	+	0	NA	Intergenic	ID_B1|SINE|B4	-2951	NM_001003908	67300	Mm.254588	NM_001003908	ENSMUSG00000047126	Cltc	3110065L21Rik|CHC|R74732	clathrin, heavy polypeptide (Hc)	protein-coding
unique_peak1-6390-9-2-1.60465090568306-1.87199725847353	chr7	78914757	78915207	+	0	NA	Intergenic	Intergenic	536499	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding
common_peak2-22492-64-95--0.119516099012553-0.359187433159323	chr13	51100785	51101689	+	0	NA	Intergenic	Intergenic	94859	NR_029463	77428	Mm.405630	NR_029463		9430083A17Rik	-	RIKEN cDNA 9430083A17 gene	ncRNA
unique_peak2-35856-10-13--0.450939577048835-0.386243247519795	chr18	75498629	75499211	+	0	NA	Intergenic	Intergenic	-28099	NM_001042660	17131	Mm.34407	NM_008543	ENSMUSG00000025880	Smad7	Madh7	SMAD family member 7	protein-coding
common_peak2-31251-3-13--2.22133801201688-2.36932189928148	chr8	70645500	70645933	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-147243	NM_177698	234353	Mm.32525	NM_027626	ENSMUSG00000030465	Psd3	4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D	pleckstrin and Sec7 domain containing 3	protein-coding
unique_peak1-6341-12-1-2.64877598508764-3.36932189928148	chr7	49396520	49397161	+	0	NA	intron (NM_001105057, intron 4 of 5)	intron (NM_001105057, intron 4 of 5)	24999	NM_001105057	637898	Mm.469900	NM_001105057	ENSMUSG00000090619	Vmn2r60	Casr-rs3|EG637898|Gprc2a-rs3	vomeronasal 2, receptor 60	protein-coding
common_peak2-29703-13-17--0.391452970804544-0.364171515310935	chr6	83101210	83101875	+	0	NA	intron (NM_133641, intron 11 of 11)	intron (NM_133641, intron 11 of 11)	4831	NM_023790	75659	Mm.130665	NM_023790		Wdr54	1700030E05Rik	WD repeat domain 54	protein-coding
common_peak2-26216-7-8--0.370834171144123-1.00793137938329	chr2	26458556	26459038	+	0	NA	intron (NM_026212, intron 1 of 5)	intron (NM_026212, intron 1 of 5)	1140	NM_026212	67512	Mm.24244	NM_026212	ENSMUSG00000026922	Agpat2	2510002J07Rik|AV000834|BSCL|BSCL1|LPAAB|LPAAT-beta	1-acylglycerol-3-phosphate O-acyltransferase 2 (lysophosphatidic acid acyltransferase, beta)	protein-coding
common_peak2-26831-19-8-1.23276232521937-1.61268301619756	chr2	152785306	152785644	+	0	NA	Intergenic	B1F1|SINE|Alu	-2746	NM_029064	74711	Mm.44746	NM_029064	ENSMUSG00000074673	Ttll9	1700016F23Rik|4930509O20Rik|AW046572	tubulin tyrosine ligase-like family, member 9	protein-coding
unique_peak2-33778-5-14--1.61127093161437-1.95509489018123	chr11	119085721	119086243	+	0	NA	intron (NM_172443, intron 1 of 11)	intron (NM_172443, intron 1 of 11)	3831	NM_172443	207592	Mm.205263	NM_172443	ENSMUSG00000039976	Tbc1d16	B930087K01|BC026530|Tcd1d16	TBC1 domain family, member 16	protein-coding
common_peak1-8442-19-35--0.767237674780626-1.06916698217164	chr10	78591380	78591939	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-19902	NM_001103368	624765	Mm.469843	NM_001103368	ENSMUSG00000091888	Vmn2r80	EG624765	vomeronasal 2, receptor 80	protein-coding
common_peak2-26668-27-46--0.563042900782402-0.849650211186454	chr2	122117739	122118607	+	0	NA	intron (NM_177610, intron 12 of 31)	intron (NM_177610, intron 12 of 31)	5728	NM_177610	214593	Mm.358846	NM_177610	ENSMUSG00000068452	Duox2	A430065P05Rik|LNOX2|NOXEF2|P138-TOX|THOX2	dual oxidase 2	protein-coding
unique_peak1-495-8-2-1.42025991722641-1.65811743852845	chr1	179984650	179985060	+	0	NA	Intergenic	L1Md_F2|LINE|L1	63289	NM_001034899	545391	Mm.442974	NM_001034899	ENSMUSG00000091476	Gm16432	EG545391|EG666250	predicted gene 16432	protein-coding
common_peak1-9334-10-7-0.356415345008769-1.12966497611638	chr11	95823841	95824336	+	0	NA	TTS (NR_037223)	TTS (NR_037223)	609	NR_037223	100526468		NR_037223	miRBase:MI0014025	Mir3063	mmu-mir-3063	microRNA 3063	ncRNA
unique_peak1-2603-9-3-1.18961340640422-1.57096726280955	chr16	33337529	33338042	+	0	NA	Intergenic	Intergenic	43037	NR_045709	100502742	Mm.217880	NR_045709	ENSMUSG00000097318	1700007L15Rik	-	RIKEN cDNA 1700007L15 gene	ncRNA
common_peak2-29011-10-15--0.643584654991231-0.519648556297791	chr5	110780103	110780818	+	0	NA	Intergenic	Intergenic	-2655	NM_001033459	381667	Mm.332572	NM_001033459	ENSMUSG00000072754	Lrcol1	Clpsl3|Gm1679	leucine rich colipase-like 1	protein-coding
common_peak1-9346-21-15-0.569489265266236-0.756118839439552	chr11	96934317	96935271	+	0	NA	Intergenic	B2_Mm2|SINE|B2	9712	NR_106181	102465893		NR_106181		Mir8103	mmu-mir-8103	microRNA mir-8103	ncRNA
common_peak2-29364-9-8-0.0196884049619079-1.03275496310833	chr5	151155466	151155900	+	0	NA	intron (NM_172887, intron 7 of 60)	intron (NM_172887, intron 7 of 60)	93178	NM_172887	320365	Mm.216590	NM_172887	ENSMUSG00000056602	Fry	13CDNA73|9330186A19Rik|AF346502|AI462658|C87180|D930046M03|cg003|mKIAA4143	furry homolog (Drosophila)	protein-coding
unique_peak2-35973-4-4--0.345388608740609-0.864171920961574	chr19	20388343	20388762	+	0	NA	Intergenic	L1Md_F2|LINE|L1	76609	NM_010730	16952	Mm.248360	NM_010730	ENSMUSG00000024659	Anxa1	Anx-1|Anx-A1|C430014K04Rik|Lpc-1|Lpc1	annexin A1	protein-coding
unique_peak2-38353-12-21--0.810655633549659-0.713635438203849	chr7	3291652	3292417	+	0	NA	promoter-TSS (NM_001093766)	promoter-TSS (NM_001093766)	-995	NM_001093766	50918	Mm.29874	NM_016969	ENSMUSG00000068566	Myadm	D7Wsu62e	myeloid-associated differentiation marker	protein-coding
common_peak2-21160-20-14-0.581184188982674-0.690311289528838	chr11	58329825	58330415	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-14064	NM_001011861	100502887	Mm.378539	NM_001011861	ENSMUSG00000058807	Olfr331	MOR275-4	olfactory receptor 331	protein-coding
unique_peak1-7109-9-2-1.60465090568306-1.87199725847353	chr9	43263728	43264249	+	0	NA	Intergenic	Intergenic	145142	NM_023655	72169	Mm.273277	NM_023655	ENSMUSG00000032013	Trim29	1110047J21Rik|2810431N19Rik|4732461M22Rik|AI119726	tripartite motif-containing 29	protein-coding
unique_peak2-33409-4-7--1.02346051385325-1.09384600808989	chr11	55419284	55419729	+	0	NA	intron (NM_001290821, intron 1 of 8)	intron (NM_001290821, intron 1 of 8)	2194	NM_001290821	14654	Mm.89320	NM_020492		Glra1	nmf11|oscillator|ot|spasmodic|spd	glycine receptor, alpha 1 subunit	protein-coding
common_peak2-24160-17-16-0.130833496954699-0.356936432242225	chr16	43889803	43890266	+	0	NA	promoter-TSS (NM_029128)	promoter-TSS (NM_029128)	19	NM_027801	212153	Mm.209835	NM_027801	ENSMUSG00000022701	2610015P09Rik	8430422M09Rik|AU040712	RIKEN cDNA 2610015P09 gene	protein-coding
common_peak2-24272-182-275-0.168444079053256-0.756011692964183	chr16	94568514	94571285	+	0	NA	Intergenic	MTB|LTR|MaLR	19870	NM_133229	170765	Mm.42604	NM_133229	ENSMUSG00000022941	Ripply3	Dscr6	ripply3 homolog (zebrafish)	protein-coding
unique_peak1-5285-17-0-4.21829633820504-6.02059991327962	chr5	66144437	66145254	+	0	NA	Intergenic	L1MC4a|LINE|L1	-9915	NM_001024917	333789	Mm.332398	NM_001024917	ENSMUSG00000037795	N4bp2	B3bp|E430014I16|Gm1791|Gm868	NEDD4 binding protein 2	protein-coding
common_peak1-17956-6-4-0.24347001549294-0.989110657569874	chr7	128531649	128531983	+	0	NA	Intergenic	ORR1C2|LTR|MaLR	-3994	NM_001081327	195646	Mm.247449	NM_177575	ENSMUSG00000046321	Hs3st2	6430516N12Rik|A830061E14Rik|AW491345	heparan sulfate (glucosamine) 3-O-sulfotransferase 2	protein-coding
common_peak1-8523-17-22--0.305265617851975-0.348739088570342	chr10	85957174	85957911	+	0	NA	intron (NM_001164495, intron 1 of 6)	intron (NM_001164495, intron 1 of 6)	4099	NM_001164495	27204	Mm.394931	NM_013722	ENSMUSG00000059602	Syn3	-	synapsin III	protein-coding
unique_peak1-5804-7-5-0.214128329577033-1.01466476204226	chr6	67035575	67036095	+	0	NA	Intergenic	Intergenic	-48434	NM_007836	13197	Mm.72235	NM_007836	ENSMUSG00000036390	Gadd45a	AA545191|Ddit1|GADD45	growth arrest and DNA-damage-inducible 45 alpha	protein-coding
common_peak2-25275-13-12-0.0780323124966764-0.334470287753051	chr18	68156922	68157392	+	0	NA	intron (NM_172631, intron 1 of 5)	Lx2B|LINE|L1	64246	NM_172631	52662	Mm.440183	NM_172631	ENSMUSG00000024544	Ldlrad4	8230401C20Rik|A430083H02|A430108L08Rik|C18orf1|D18Ertd653e|D330030L18Rik	low density lipoprotein receptor class A domain containing 4	protein-coding
common_peak1-17964-32-17-1.10916701777735-2.22933157796382	chr7	130756666	130757884	+	0	NA	Intergenic	L1Md_A|LINE|L1	-113312	NM_001081329	210162	Mm.135397	NM_175435	ENSMUSG00000030757	Zkscan2	9430065N20Rik|AW493225|Zfp694	zinc finger with KRAB and SCAN domains 2	protein-coding
unique_peak2-34493-4-16--2.11092335510359-1.97518968347063	chr14	45657252	45657913	+	0	NA	Intergenic	ORR1E|LTR|MaLR	49796	NM_008964	19217	Mm.4630	NM_008964	ENSMUSG00000037759	Ptger2	EP2|Ptgerep2	prostaglandin E receptor 2 (subtype EP2)	protein-coding
common_peak2-21656-13-37--1.46945548280582-2.63673708350642	chr11	102604196	102605126	+	0	NA	Intergenic	Intergenic	-18092	NM_009613	11488	Mm.89854	NM_009613	ENSMUSG00000020926	Adam11	AW060611|Mdc	a disintegrin and metallopeptidase domain 11	protein-coding
unique_peak2-33099-5-10--1.16381195464315-1.33892459842472	chr10	80656144	80656710	+	0	NA	TTS (NM_001190474)	TTS (NM_001190474)	-1009	NR_015477	69678	Mm.81562	NR_015477		Atcayos	2310050B05Rik	ataxia, cerebellar, Cayman type homolog (human), opposite strand	ncRNA
common_peak2-19784-27-40--0.366006053722848-0.494448899774786	chr1	84839608	84840837	+	0	NA	intron (NM_025386, intron 1 of 3)	B2_Mm2|SINE|B2	3806	NM_025386	66153	Mm.381192	NM_025386	ENSMUSG00000073633	Fbxo36	0610008D19Rik|1110020F21Rik|2410002G19Rik|D1Ertd757e	F-box protein 36	protein-coding
unique_peak1-3174-10-3-1.35641534500877-1.75805390616669	chr18	39393743	39394237	+	0	NA	intron (NM_175164, intron 14 of 22)	intron (NM_175164, intron 14 of 22)	241191	NM_175164	71302	Mm.329396	NM_175164	ENSMUSG00000036452	Arhgap26	1810044B20Rik|2610010G17Rik|4933432P15Rik|AI853435|mKIAA0621	Rho GTPase activating protein 26	protein-coding
common_peak2-20406-9-19--1.13231468848314-1.09394599973099	chr10	24149251	24149940	+	0	NA	Intergenic	Intergenic	-165653	NM_010217	14219	Mm.390287	NM_010217	ENSMUSG00000019997	Ctgf	Ccn2|Fisp12|Hcs24|fisp-12	connective tissue growth factor	protein-coding
unique_peak1-6653-17-3-2.21829633820504-3.11807310444576	chr8	14683616	14684274	+	0	NA	intron (NM_172910, intron 4 of 15)	intron (NM_172910, intron 4 of 15)	-204591	NM_012000	26889	Mm.254027	NM_012000	ENSMUSG00000026317	Cln8	mnd	ceroid-lipofuscinosis, neuronal 8	protein-coding
common_peak1-15195-15-9-0.690236655668294-0.732381977911291	chr3	159192819	159193485	+	0	NA	TTS (NM_029523)	TTS (NM_029523)	34755	NM_001172093	76131	Mm.371655	NM_029523	ENSMUSG00000028175	Depdc1a	5830484J08Rik|Depdc1	DEP domain containing 1a	protein-coding
common_peak1-16970-38-39-0.249524564411168-0.503563708672202	chr6	86472273	86473489	+	0	NA	Intergenic	Intergenic	3278	NM_011865	23983	Mm.274146	NM_011865	ENSMUSG00000051695	Pcbp1	WBP17|[a]CP-1|alphaCP-1	poly(rC) binding protein 1	protein-coding
unique_peak2-32853-1-5--2.2120195109379-1.32905871926422	chr10	39616483	39616694	+	0	NA	intron (NR_033628, intron 1 of 3)	MTC-int|LTR|MaLR	2456	NR_033628	213332	Mm.484359	NR_033628		AA474331	-	expressed sequence AA474331	pseudo
unique_peak2-37101-5-8--0.874305337448166-1.10484139239135	chr3	159068808	159069398	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-89294	NM_001172092	76131	Mm.371655	NM_029523	ENSMUSG00000028175	Depdc1a	5830484J08Rik|Depdc1	DEP domain containing 1a	protein-coding
unique_peak1-6982-13-1-2.77847203063777-3.64038867156802	chr8	119812899	119813447	+	0	NA	intron (NM_001163262, intron 1 of 20)	intron (NM_001163262, intron 1 of 20)	32254	NM_001163262	74440	Mm.233181	NM_028941	ENSMUSG00000034390	Cmip	4933407C03Rik|5830471E12Rik|AI314065|AI464126	c-Maf inducing protein	protein-coding
common_peak2-20267-11-13--0.298661337805991-0.337263207250336	chr1	189866916	189867520	+	0	NA	exon (NM_011935, exon 2 of 7)	exon (NM_011935, exon 2 of 7)	-34349	NR_038007	320272	Mm.446274	NR_038007		9330162B11Rik	-	RIKEN cDNA 9330162B11 gene	ncRNA
common_peak1-17089-36-34-0.350038069222788-0.634705740500755	chr6	112245003	112246139	+	0	NA	intron (NM_144799, intron 1 of 5)	intron (NM_144799, intron 1 of 5)	-5258	NR_045986	100503613	Mm.136719	NM_177012		5031434C07Rik	-	RIKEN cDNA 5031434C07 gene	ncRNA
unique_peak2-33091-1-7--2.62705701021674-1.80617997398389	chr10	80223498	80223855	+	0	NA	intron (NM_199322, intron 1 of 27)	intron (NM_199322, intron 1 of 27)	5725	NM_199322	208266	Mm.152371	NM_199322	ENSMUSG00000061589	Dot1l	A630076O07|AW907654|Dot1|KMT4|mDot1	DOT1-like, histone H3 methyltransferase (S. cerevisiae)	protein-coding
common_peak2-30339-10-7-0.356415345008769-1.12966497611638	chr7	25433522	25433888	+	0	NA	Intergenic	RSINE1|SINE|B4	12116	NM_133743	72434	Mm.281093	NM_133743	ENSMUSG00000057454	Lypd3	2310061G07Rik|C4.4a	Ly6/Plaur domain containing 3	protein-coding
common_peak2-25463-14-7-0.899216160357645-0.947446088118041	chr19	4244145	4244600	+	0	NA	Intergenic	RMER4B|LTR|ERVK	12473	NM_027196	69745	Mm.32518	NM_027196	ENSMUSG00000024854	Pold4	2410012M21Rik|AI463381|AW060307|Polds|p12	polymerase (DNA-directed), delta 4	protein-coding
unique_peak2-37044-2-4--1.23938235115068-0.931118710592187	chr3	133601364	133601758	+	0	NA	Intergenic	Intergenic	-297898	NM_001004367	319478	Mm.224814	NM_001004367	ENSMUSG00000044365	Cxxc4	9330210J02Rik|C030003J12Rik|Idax	CXXC finger 4	protein-coding
common_peak1-12822-43-71--0.387361815918609-0.743411445750435	chr18	68299276	68301138	+	0	NA	intron (NM_172631, intron 3 of 5)	intron (NM_172631, intron 3 of 5)	120420	NR_106078	102465702		NR_106078	miRBase:MI0023714	Mir7219	mmu-mir-7219	microRNA mir-7219	ncRNA
common_peak1-10158-14-10-0.439784541720347-0.519648556297791	chr13	37442059	37442746	+	0	NA	intron (NM_010745, intron 1 of 4)	intron (NM_010745, intron 1 of 4)	5188	NM_010745	17084	Mm.2639	NM_010745	ENSMUSG00000021423	Ly86	MD-1|MD1	lymphocyte antigen 86	protein-coding
unique_peak1-4747-11-7-0.508693584251613-1.21681515183528	chr3	109368366	109368882	+	0	NA	intron (NM_020505, intron 17 of 26)	intron (NM_020505, intron 17 of 26)	-8301	NM_146139	57257	Mm.282257	NM_020505	ENSMUSG00000033721	Vav3	A530094I06Rik|AA986410|Idd18.1	vav 3 oncogene	protein-coding
common_peak1-10227-14-9-0.577288065470282-0.630231561310125	chr13	51886047	51886704	+	0	NA	intron (NM_001281880, intron 1 of 16)	intron (NM_001281880, intron 1 of 16)	2741	NM_001281880	20354	Mm.33903	NM_013660	ENSMUSG00000021451	Sema4d	CD100|Semacl2|Semaj|Semcl2|coll-4	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D	protein-coding
common_peak2-27064-10-30--1.59778096537811-2.57346781069461	chr2	181598385	181599318	+	0	NA	promoter-TSS (NM_025901)	promoter-TSS (NM_025901)	-214	NM_025901	67005	Mm.271986	NM_025901	ENSMUSG00000038628	Polr3k	12.3kDa|1500004O14Rik|AI196849|AU014893|C11|RPC10|RPC11	polymerase (RNA) III (DNA directed) polypeptide K	protein-coding
unique_peak2-35029-7-9--0.522837264589173-1.05908390183068	chr15	103272890	103273270	+	0	NA	intron (NM_177631, intron 4 of 6)	L1_Mus3|LINE|L1	5810	NM_177631	223927	Mm.243718	NM_177631	ENSMUSG00000053508	BC048502	-	cDNA sequence BC048502	protein-coding
common_peak2-28815-27-17-0.821620949452924-1.31432283146954	chr5	65454116	65454847	+	0	NA	Intergenic	Intergenic	-67989	NM_175174	71778	Mm.10281	NM_175174	ENSMUSG00000054920	Klhl5	1300013C10Rik	kelch-like 5	protein-coding
common_peak2-25779-14-10-0.439784541720347-0.519648556297791	chr19	33030282	33030772	+	0	NA	Intergenic	Intergenic	198460	NM_008960	19211	Mm.245395	NM_008960	ENSMUSG00000013663	Pten	2310035O07Rik|A130070J02Rik|AI463227|B430203M17Rik|MMAC1|TEP1	phosphatase and tensin homolog	protein-coding
common_peak1-12846-29-34--0.0169929363298555-0.304177167304369	chr18	73753913	73754941	+	0	NA	Intergenic	Intergenic	22068	NM_001039214	240396	Mm.24131	NM_001039214	ENSMUSG00000037253	Mex3c	A130001D14Rik|BC035207|BM-013|Rkhd2	mex3 homolog C (C. elegans)	protein-coding
common_peak1-14166-8-11--0.579740082773585-1.14218153353838	chr2	139840900	139841381	+	0	NA	intron (NR_110352, intron 3 of 12)	intron (NR_110352, intron 3 of 12)	51401	NM_001159640	75812	Mm.293449	NM_175225	ENSMUSG00000039033	Tasp1	4930485D02Rik|AW986064	taspase, threonine aspartase 1	protein-coding
common_peak2-19537-21-11-0.984526764545079-1.3750876294627	chr1	89570752	89571520	+	0	NA	intron (NR_122078, intron 5 of 27)	intron (NR_122078, intron 5 of 27)	54249	NM_001110193	16331	Mm.15105	NM_010566	ENSMUSG00000026288	Inpp5d	SHIP|SHIP-1|SHIP1|SIP-145|p150Ship|s-SHIP	inositol polyphosphate-5-phosphatase D	protein-coding
common_peak2-20179-31-45--0.29832328524389-0.470780655014941	chr1	171503189	171504341	+	0	NA	Intergenic	Lx8|LINE|L1	-42170	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
common_peak2-26426-20-23--0.0968877161299631-0.305855887145851	chr2	61401578	61402454	+	0	NA	Intergenic	Intergenic	-14627	NM_011529	21353	Mm.244393	NM_011529	ENSMUSG00000064289	Tank	C86182|E430026L09Rik|I-TRAF	TRAF family member-associated Nf-kappa B activator	protein-coding
common_peak2-32391-5-11--1.28934283672701-1.477227296591	chrX	134600401	134600962	+	0	NA	intron (NM_030688, intron 2 of 10)	Lx2|LINE|L1	143438	NM_026469	67944	Mm.443280	NM_026469	ENSMUSG00000071686	Tex13a	1700025D03Rik	testis expressed 13A	protein-coding
common_peak1-12823-36-15-1.47932108616775-3.70968671820992	chr18	69169072	69170427	+	0	NA	Intergenic	Intergenic	12178	NR_105780	102465187		NR_105780	miRBase:MI0021890	Mir145b	mmu-mir-145b	microRNA mir-145b	ncRNA
common_peak2-23792-32-21-0.819660400582363-1.49187957593	chr15	99723563	99724618	+	0	NA	Intergenic	RMER13A|LTR|ERVK	-18203	NM_001113545	65970	Mm.33207	NM_023063	ENSMUSG00000023022	Lima1	Eplin	LIM domain and actin binding 1	protein-coding
common_peak1-15481-20-11-0.903112283870037-1.11267835143409	chr4	108387415	108388333	+	0	NA	intron (NM_183300, intron 1 of 15)	(TATG)n|Simple_repeat|Simple_repeat	-4380	NM_001254730	73133	Mm.196776	NM_001254730		3110021N24Rik	2610002D03Rik	RIKEN cDNA 3110021N24 gene	protein-coding
common_peak1-19447-18-19--0.00900894365901106-0.306598483909153	chrX	98937184	98938090	+	0	NA	Intergenic	B3A|SINE|B2	-8151	NM_009910	12766	Mm.12876	NM_009910	ENSMUSG00000050232	Cxcr3	Cd183|Cmkar3	chemokine (C-X-C motif) receptor 3	protein-coding
common_peak2-24049-14-11-0.314253659636488-0.435191258261915	chr16	25423744	25424457	+	0	NA	Intergenic	Intergenic	137197	NM_175165	71338	Mm.126851	NM_175165	ENSMUSG00000048399	Tprg	5430420C16Rik|Tprg1	transformation related protein 63 regulated	protein-coding
common_peak2-26320-10-5-0.771452844287613-1.33892459842472	chr2	32961264	32961592	+	0	NA	Intergenic	ORR1B1|LTR|MaLR	-18704	NM_178888	99326	Mm.41290	NM_178888	ENSMUSG00000038860	Garnl3	AW120551	GTPase activating RANGAP domain-like 3	protein-coding
unique_peak1-470-8-5-0.420259917226415-1.10484139239135	chr1	172307826	172308392	+	0	NA	intron (NM_027528, intron 3 of 7)	PB1|SINE|Alu	69117	NM_001039593	76925	Mm.33631	NM_001039593	ENSMUSG00000042800	1700015E13Rik	-	RIKEN cDNA 1700015E13 gene	protein-coding
unique_peak1-7100-34-12-1.68162880886017-4.13403188036199	chr9	41582803	41584202	+	0	NA	Intergenic	Intergenic	193493	NR_029822	387236		NR_029822	miRBase:MI0000725	Mir125b-1	Mirn125b|Mirn125b-1	microRNA 125b-1	ncRNA
common_peak2-26321-49-29-1.09939322741667-3.23296565093675	chr2	32961662	32962757	+	0	NA	Intergenic	ORR1B1-int|LTR|MaLR	-19485	NM_178888	99326	Mm.41290	NM_178888	ENSMUSG00000038860	Garnl3	AW120551	GTPase activating RANGAP domain-like 3	protein-coding
unique_peak1-4447-10-1-2.35641534500877-2.57096726280955	chr2	172348545	172349051	+	0	NA	Intergenic	Intergenic	-26295	NM_009335	21420	Mm.3629	NM_009335	ENSMUSG00000028640	Tfap2c	AA409384|AP2gamma|Ap-2.2|Stra2|Tcfap2c	transcription factor AP-2, gamma	protein-coding
common_peak1-7751-26-22-0.404337136101449-0.569352520859861	chr1	91024563	91025588	+	0	NA	intron (NM_133816, intron 2 of 5)	intron (NM_133816, intron 2 of 5)	58038	NM_133816	98402	Mm.170983	NM_133816		Sh3bp4	AI594717|AW227605|BOG25	SH3-domain binding protein 4	protein-coding
unique_peak1-3333-9-5-0.604650905683064-1.21398586181642	chr18	84903186	84903696	+	0	NA	intron (NM_173770, intron 3 of 4)	intron (NM_173770, intron 3 of 4)	13807	NM_173770	240479	Mm.472378	NM_173770	ENSMUSG00000047992	Fam69c	B230399E16Rik	family with sequence similarity 69, member C	protein-coding
common_peak1-14236-26-39--0.3940290027289-0.556669751231374	chr2	153240789	153241988	+	0	NA	intron (NM_001001986, intron 7 of 7)	intron (NM_001001986, intron 7 of 7)	28827	NM_001001986	329540	Mm.50600	NM_001001986	ENSMUSG00000061411	Nol4l	4931410H15|8430427H17Rik|AI429157|Gm1636	nucleolar protein 4-like	protein-coding
common_peak1-11799-43-46-0.227974333846065-0.475408985215012	chr16	56716268	56717423	+	0	NA	intron (NM_019678, intron 1 of 7)	intron (NM_019678, intron 1 of 7)	718	NM_001252443	21787	Mm.425970	NM_019678	ENSMUSG00000022757	Tfg	AI173908	Trk-fused gene	protein-coding
unique_peak2-37975-10-6-0.549060422951165-1.21398586181642	chr6	146308715	146309141	+	0	NA	intron (NM_010586, intron 20 of 55)	intron (NM_010586, intron 20 of 55)	141817	NM_010586	16439	Mm.7800	NM_010586	ENSMUSG00000030287	Itpr2	AI649341|InsP3R-2|InsP3R-5|Ip3r2|Itpr5|insP3R2	inositol 1,4,5-triphosphate receptor 2	protein-coding
common_peak2-26262-9-12--0.510826311736872-0.394412252720706	chr2	30393336	30393973	+	0	NA	Intergenic	B4|SINE|B4	-56910	NM_030137	78617	Mm.40413	NM_030137	ENSMUSG00000047363	Cstad	9530039B02Rik	CSA-conditional, T cell activation-dependent protein	protein-coding
common_peak1-12933-21-11-0.984526764545079-1.3750876294627	chr19	6241650	6242512	+	0	NA	intron (NM_194348, intron 1 of 39)	intron (NM_194348, intron 1 of 39)	413	NM_194348	329015	Mm.277384	NM_194348	ENSMUSG00000024773	Atg2a	1810013C15Rik|A830054M12|BC023754|mKIAA0404	autophagy related 2A	protein-coding
unique_peak1-5647-8-2-1.42025991722641-1.65811743852845	chr6	28758355	28758847	+	0	NA	intron (NM_019776, intron 16 of 23)	intron (NM_019776, intron 16 of 23)	23146	NM_138682	192198	Mm.443660	NM_138682	ENSMUSG00000049939	Lrrc4	MBAG1|NGL-2|NLG-2|Nag14	leucine rich repeat containing 4	protein-coding
common_peak2-20730-13-13--0.0288828914198356-0.309074325783021	chr10	99211605	99212074	+	0	NA	Intergenic	Intergenic	10453	NM_027945	71832	Mm.483162	NM_027945	ENSMUSG00000046934	Csl	1700007H16Rik	citrate synthase like	protein-coding
unique_peak1-6816-8-1-2.00522241794757-2.05605744720049	chr8	73298092	73298706	+	0	NA	intron (NM_008841, intron 2 of 15)	intron (NM_008841, intron 2 of 15)	2212	NM_008841	18709	Mm.12945	NM_008841	ENSMUSG00000031834	Pik3r2	p85beta	phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 2 (p85 beta)	protein-coding
common_peak2-23564-69-77-0.309740228396484-0.801324102131202	chr15	79367547	79369254	+	0	NA	intron (NM_001040187, intron 8 of 12)	ID_B1|SINE|B4	-5053	NM_152806	67040	Mm.29644	NM_152806	ENSMUSG00000055065	Ddx17	2610007K22Rik|A430025E01Rik|AI047725|C80929|Gm926|p72	DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	protein-coding
common_peak2-24356-33-54--0.450022150999131-0.755494033265326	chr17	6429306	6431258	+	0	NA	intron (NM_009342, intron 1 of 4)	intron (NM_009342, intron 1 of 4)	1022	NM_009342	21648	Mm.1948	NM_009342	ENSMUSG00000096255	Dynlt1b	AGS2|Dynlt1|Tctex-1|Tctex1	dynein light chain Tctex-type 1B	protein-coding
unique_peak1-3811-9-0-3.18961340640422-3.01029995663981	chr2	137756302	137756823	+	0	NA	Intergenic	Intergenic	-325758	NM_001025431	228662	Mm.153405	NM_145534	ENSMUSG00000062098	Btbd3	mKIAA0952	BTB (POZ) domain containing 3	protein-coding
common_peak2-25243-9-7-0.18961340640422-1.05908390183068	chr18	64660684	64661210	+	0	NA	intron (NM_001142950, intron 14 of 14)	intron (NM_001142950, intron 14 of 14)	-12227	NM_007998	14151	Mm.1070	NM_007998	ENSMUSG00000024588	Fech	AI894116|Fcl|fch	ferrochelatase	protein-coding
common_peak2-24637-16-31--0.881736357731938-1.20073456579999	chr17	34981883	34982487	+	0	NA	promoter-TSS (NR_105936)	promoter-TSS (NR_105936)	-73	NR_105936	102465586		NR_105936		Mir6970	mmu-mir-6970	microRNA mir-6970	ncRNA
common_peak1-9753-80-61-0.896379455982477-3.95745127355647	chr12	52602546	52604181	+	0	NA	Intergenic	MTD|LTR|MaLR	-90965	NM_007728	12810	Mm.21325	NM_007728	ENSMUSG00000020953	Coch	AW122937|Coch-5B2|D12H14S564E	coagulation factor C homolog (Limulus polyphemus)	protein-coding
common_peak1-17405-32-10-1.81966040058236-4.28341153583535	chr7	4690513	4691522	+	0	NA	promoter-TSS (NM_001115018)	promoter-TSS (NM_001115018)	-712	NM_146177	232811	Mm.247844	NM_146177	ENSMUSG00000059851	Suv420h2	BC024816|KMT5C|Suv4-20h2	suppressor of variegation 4-20 homolog 2 (Drosophila)	protein-coding
common_peak2-24954-14-21--0.560215458279653-0.519193887192484	chr18	75005822	75006436	+	0	NA	Intergenic	Intergenic	67263	NM_177470	52538	Mm.245724	NM_177470	ENSMUSG00000036880	Acaa2	0610011L04Rik|AI255831|AI265397|D18Ertd240e	acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase)	protein-coding
common_peak2-22010-24-18-0.545282389324131-0.776879508296351	chr12	56528900	56529663	+	0	NA	Intergenic	PB1D10|SINE|Alu	29469	NM_011968	26443	Mm.30210	NM_011968	ENSMUSG00000021024	Psma6	IOTA	proteasome (prosome, macropain) subunit, alpha type 6	protein-coding
common_peak1-8762-63-68-0.32978813429242-0.808047149029747	chr11	5787386	5789253	+	0	NA	Intergenic	Intergenic	-10060	NM_008894	18972	Mm.35788	NM_008894	ENSMUSG00000020471	Pold2	50kDa|p50|po1D2	polymerase (DNA directed), delta 2, regulatory subunit	protein-coding
common_peak1-17678-17-12-0.517856620063946-0.647240723060192	chr7	66308209	66309129	+	0	NA	Intergenic	RLTR19-int|LTR|ERVK	-175451	NM_173010	22215	Mm.9002	NM_011668	ENSMUSG00000025326	Ube3a	4732496B02|5830462N02Rik|A130086L21Rik|Hpve6a|mKIAA4216	ubiquitin protein ligase E3A	protein-coding
common_peak2-31842-10-4-1.03448725012141-1.5150158574804	chr9	45838808	45839140	+	0	NA	intron (NM_027498, intron 1 of 24)	B3|SINE|B2	18071	NM_027498	70661	Mm.219459	NM_027498	ENSMUSG00000034135	Sik3	5730525O22Rik|9030204A07Rik|AI447252|AI846254|AI849445|Qsk|SIK-3|mKIAA0999	SIK family kinase 3	protein-coding
unique_peak1-6176-8-1-2.00522241794757-2.05605744720049	chr6	145764197	145764744	+	0	NA	intron (NM_027760, intron 2 of 3)	intron (NM_027760, intron 2 of 3)	7567	NM_027760	71323	Mm.158669	NM_027760	ENSMUSG00000030259	Rassf8	5133400D11Rik|AA815821|AW123240|Hoj1|mHoj-1	Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	protein-coding
unique_peak2-37256-2-6--1.72480917832092-1.26211192963361	chr4	105158335	105158657	+	0	NA	Intergenic	Intergenic	328544	NM_080555	67916	Mm.348326	NM_080555	ENSMUSG00000028517	Ppap2b	1110003O22Rik|2610002D05Rik|AV025606|D4Bwg0538e|D4Bwg1535e|Lpp3|Ppab2b	phosphatidic acid phosphatase type 2B	protein-coding
unique_peak1-2927-8-1-2.00522241794757-2.05605744720049	chr17	50633543	50633995	+	0	NA	Intergenic	Intergenic	-15103	NM_013880	224860	Mm.217362	NM_013880	ENSMUSG00000038910	Plcl2	PLC-L2|PRIP-2|Plce2|mKIAA1092	phospholipase C-like 2	protein-coding
common_peak1-16564-13-30--1.17572427974911-1.59386218057211	chr5	146220865	146221695	+	0	NA	intron (NM_007820, intron 4 of 12)	L1_Mm|LINE|L1	9312	NM_007820	13114	Mm.378905	NM_007820	ENSMUSG00000038656	Cyp3a16	-	cytochrome P450, family 3, subfamily a, polypeptide 16	protein-coding
unique_peak1-1879-10-6-0.549060422951165-1.21398586181642	chr14	60738412	60738907	+	0	NA	Intergenic	L1MB3|LINE|L1	-32988	NM_015803	50769	Mm.319599	NM_015803	ENSMUSG00000021983	Atp8a2	AI415030|Atpc1b|wl	ATPase, aminophospholipid transporter-like, class I, type 8A, member 2	protein-coding
common_peak1-17770-24-24-0.149353712992992-0.367910579842133	chr7	92636557	92637723	+	0	NA	Intergenic	L1Md_F3|LINE|L1	-72954	NM_001105182	330581	Mm.469909	NM_001105182	ENSMUSG00000091006	Vmn2r69	-	vomeronasal 2, receptor 69	protein-coding
common_peak1-10375-57-76--0.000753500615972236-0.302449268781736	chr13	93498211	93499928	+	0	NA	Intergenic	Intergenic	65704	NM_011582	21828	Mm.20865	NM_011582	ENSMUSG00000021702	Thbs4	TSP4	thrombospondin 4	protein-coding
unique_peak1-4852-9-3-1.18961340640422-1.57096726280955	chr3	158389916	158390483	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-165014	NM_001081358	242274	Mm.132162	NM_001081358	ENSMUSG00000028176	Lrrc7	AK122498|densin|mKIAA1365	leucine rich repeat containing 7	protein-coding
unique_peak2-33707-4-5--0.608423014574403-0.909929411522249	chr11	109439909	109440297	+	0	NA	intron (NM_145940, intron 9 of 12)	intron (NM_145940, intron 9 of 12)	32600	NM_145940	52639	Mm.35817	NM_145940	ENSMUSG00000041895	Wipi1	4930533H01Rik|AW411817|D11Ertd498e	WD repeat domain, phosphoinositide interacting 1	protein-coding
unique_peak2-38292-3-4--0.73591118484664-0.864171920961574	chr6	135067873	135068262	+	0	NA	intron (NM_001205396, intron 1 of 3)	intron (NM_001205396, intron 1 of 3)	234	NM_053118	93746	Mm.49902	NM_053118	ENSMUSG00000030205	Gprc5d	-	G protein-coupled receptor, family C, group 5, member D	protein-coding
common_peak1-19460-43-70--0.367183933980979-0.692838550835943	chrX	105928646	105929587	+	0	NA	Intergenic	Intergenic	100578	NM_001081477	382236	Mm.100112	NM_001081477	ENSMUSG00000063663	Brwd3	Brodl|D030064D06Rik|Gm596	bromodomain and WD repeat domain containing 3	protein-coding
unique_peak1-2875-9-0-3.18961340640422-3.01029995663981	chr17	35953024	35953568	+	0	NA	Intergenic	Intergenic	-5362	NM_133662	15937	Mm.25613	NM_133662	ENSMUSG00000003541	Ier3	AI663993|IEX-1|cI-3|gly96	immediate early response 3	protein-coding
unique_peak1-6204-8-4-0.683294323060208-1.21878474469819	chr7	73531212	73531737	+	0	NA	intron (NM_146191, intron 1 of 33)	Lx7|LINE|L1	1753	NM_146191	233328	Mm.33284	NM_146191	ENSMUSG00000015133	Lrrk1	AW319595|C230002E15Rik|D130026O16Rik|mKIAA1790	leucine-rich repeat kinase 1	protein-coding
common_peak2-19905-10-10--0.103016273628528-0.301029995663987	chr1	118388905	118389399	+	0	NA	intron (NM_001077425, intron 19 of 23)	L1Md_T|LINE|L1	807438	NM_001077425	636808	Mm.101576	NM_001077425	ENSMUSG00000070695	Cntnap5a	Caspr5-1|EG636808	contactin associated protein-like 5A	protein-coding
unique_peak1-3938-11-5-0.923731083530457-1.477227296591	chr2	27672752	27673220	+	0	NA	Intergenic	Intergenic	-68959	NM_015734	12831	Mm.7281	NM_015734	ENSMUSG00000026837	Col5a1	AI413331	collagen, type V, alpha 1	protein-coding
unique_peak1-2105-11-2-1.92373108353046-2.32232533660526	chr15	39669490	39670037	+	0	NA	intron (NM_001164466, intron 4 of 9)	intron (NM_001164466, intron 4 of 9)	19253	NM_001164466	64705	Mm.275974	NM_022722	ENSMUSG00000022304	Dpys	1200017I10Rik|1300004I01Rik|DHP|DHPase	dihydropyrimidinase	protein-coding
common_peak1-8888-60-73-0.144838495991581-0.414570791443893	chr11	48825911	48827052	+	0	NA	Intergenic	Intergenic	-20725	NM_001145164	100039796	Mm.482363	NM_001145164	ENSMUSG00000078921	Tgtp2	OTTMUSG00000005537	T cell specific GTPase 2	protein-coding
common_peak1-15285-8-12--0.695217300193522-0.475924844171029	chr4	40853340	40853832	+	0	NA	Intergenic	Intergenic	-13503	NM_011463	20731	Mm.25246	NM_011463	ENSMUSG00000028415	Spink4	MPGC60	serine peptidase inhibitor, Kazal type 4	protein-coding
unique_peak1-1103-9-0-3.18961340640422-3.01029995663981	chr11	90195919	90196402	+	0	NA	Intergenic	Intergenic	56071	NM_172563	217082	Mm.158903	NM_172563	ENSMUSG00000003949	Hlf	E230015K02Rik	hepatic leukemia factor	protein-coding
common_peak1-13483-7-12--0.901348887842903-1.31827279259406	chr2	25460387	25460869	+	0	NA	intron (NM_001024616, intron 1 of 14)	(T)n|Simple_repeat|Simple_repeat	3338	NM_001024616	227624	Mm.29600	NM_001024616	ENSMUSG00000015087	Rabl6	B230208H17Rik|Rbel1|Rbel1a|Rbel1b|parf	RAB, member RAS oncogene family-like 6	protein-coding
unique_peak1-4285-9-4-0.867685311516858-1.36011389749466	chr2	142894300	142894897	+	0	NA	intron (NM_021335, intron 4 of 6)	intron (NM_021335, intron 4 of 6)	5793	NM_021335	20639	Mm.1323	NM_021335		Snrpb2	2810052G09Rik	U2 small nuclear ribonucleoprotein B	protein-coding
common_peak1-10819-70-45-1.09640496031839-4.66998455586444	chr14	99323992	99325573	+	0	NA	Intergenic	Lx9|LINE|L1	120573	NM_175245	76789	Mm.38912	NM_175245	ENSMUSG00000033186	Mzt1	2410129H14Rik|AI120158|Mozart1	mitotic spindle organizing protein 1	protein-coding
common_peak1-19151-58-108--0.472234389886429-1.28156456703858	chr9	90113569	90114874	+	0	NA	intron (NM_194334, intron 8 of 12)	intron (NM_194334, intron 8 of 12)	51386	NM_194334	67016	Mm.335347	NM_194334	ENSMUSG00000037410	Tbc1d2b	1810061M12Rik|AI480956|AV021536|AV023399|AW491493|mKIAA1055	TBC1 domain family, member 2B	protein-coding
common_peak1-16119-21-15-0.569489265266236-0.756118839439552	chr5	66148803	66149521	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-5598	NM_001024917	333789	Mm.332398	NM_001024917	ENSMUSG00000037795	N4bp2	B3bp|E430014I16|Gm1791|Gm868	NEDD4 binding protein 2	protein-coding
unique_peak1-1941-6-2-0.980435609659146-1.26211192963361	chr14	79486610	79487084	+	0	NA	intron (NM_027906, intron 29 of 44)	intron (NM_027906, intron 29 of 44)	160327	NM_001033215	105590	Mm.486536	NM_001033215	ENSMUSG00000071262	Zfp957	AU017455	zinc finger protein 957	protein-coding
unique_peak2-38031-1-5--2.2120195109379-1.32905871926422	chr6	37857332	37857662	+	0	NA	intron (NM_145076, intron 2 of 18)	B3|SINE|B2	7010	NM_001272076	21848	Mm.41063	NM_145076		Trim24	A130082H20Rik|AI447469|D430004I05Rik|TIF1|TIF1-alpha|TIF1alpha|Tif1a	tripartite motif-containing 24	protein-coding
common_peak1-14697-9-6-0.382258484346616-1.11707584880836	chr3	68534715	68535174	+	0	NA	Intergenic	L1Md_T|LINE|L1	39598	NM_008351	16159	Mm.103783	NM_008351	ENSMUSG00000027776	Il12a	IL-12p35|Il-12a|Ll12a|p35	interleukin 12a	protein-coding
unique_peak1-5920-11-0-3.50869358425161-3.61235994796777	chr6	89034466	89035124	+	0	NA	Intergenic	Intergenic	-11314	NM_175017	232217	Mm.281744	NM_175017	ENSMUSG00000055403	4933427D06Rik	-	RIKEN cDNA 4933427D06 gene	protein-coding
common_peak1-11857-6-8--0.60452689106201-1.03789460276074	chr16	91728134	91728629	+	0	NA	intron (NM_026994, intron 1 of 11)	intron (NM_026994, intron 1 of 11)	666	NM_026994	66609	Mm.109823	NM_026994	ENSMUSG00000058240	Cryzl1	2210407J23Rik|2410006O11Rik|QOH-1	crystallin, zeta (quinone reductase)-like 1	protein-coding
common_peak1-12643-10-10--0.103016273628528-0.301029995663987	chr18	35382975	35383514	+	0	NA	intron (NM_009818, intron 9 of 17)	intron (NM_009818, intron 9 of 17)	-8566	NM_178005	107065	Mm.39900	NM_178005	ENSMUSG00000071862	Lrrtm2	AI851755|BB129880|C630011A14Rik|mKIAA0416	leucine rich repeat transmembrane neuronal 2	protein-coding
common_peak2-25142-20-28--0.369906210536379-0.457753417732779	chr18	44472828	44473830	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	-20399	NM_001033621	58916	Mm.143804	NM_001033621	ENSMUSG00000024471	Myot	5530402I04Rik|Ttid	myotilin	protein-coding
common_peak2-21568-16-6-1.31090872021046-1.49151883326344	chr11	97440015	97440385	+	0	NA	Intergenic	Intergenic	-3760	NM_018873	56013	Mm.342665	NM_018873	ENSMUSG00000038453	Srcin1	P140|SNIP|mKIAA1684|p140Cap	SRC kinase signaling inhibitor 1	protein-coding
unique_peak2-33153-9-18--1.05831410703937-0.965105923112245	chr10	88200823	88201637	+	0	NA	intron (NM_025859, intron 4 of 5)	intron (NM_025859, intron 4 of 5)	7071	NM_025859	104303	Mm.291247	NM_025859	ENSMUSG00000060904	Arl1	2310008D22Rik|AU019749	ADP-ribosylation factor-like 1	protein-coding
unique_peak1-606-8-0-3.00522241794757-2.70926996097583	chr10	20736127	20736673	+	0	NA	intron (NM_026203, intron 17 of 23)	intron (NM_026203, intron 17 of 23)	-24226	NM_001177776	52906	Mm.253280	NM_026203	ENSMUSG00000019986	Ahi1	1700015F03Rik|Ahi-1|D10Bwg0629e	Abelson helper integration site 1	protein-coding
common_peak2-21054-19-35--0.767237674780626-1.06916698217164	chr11	44462473	44462966	+	0	NA	intron (NM_001290710, intron 6 of 14)	intron (NM_001290710, intron 6 of 14)	31117	NM_001290710	13591	Mm.439662	NM_007897		Ebf1	Ebf|O/E-1|OE-1|Olf-1|Olf1	early B cell factor 1	protein-coding
unique_peak1-6471-12-1-2.64877598508764-3.36932189928148	chr7	109521366	109521742	+	0	NA	intron (NM_009287, intron 2 of 11)	MER44C|DNA|MER2_type	-68655	NM_009103	20133	Mm.197486	NM_009103	ENSMUSG00000030978	Rrm1	RnrM1	ribonucleotide reductase M1	protein-coding
unique_peak1-39-8-0-3.00522241794757-2.70926996097583	chr1	19062555	19063081	+	0	NA	Intergenic	Intergenic	-30285	NM_153154	226896	Mm.244858	NM_153154	ENSMUSG00000042596	Tfap2d	Tcfap2d	transcription factor AP-2, delta	protein-coding
common_peak2-20756-33-57--0.526643432602043-0.951347777694914	chr10	115315091	115316311	+	0	NA	Intergenic	Lx9|LINE|L1	61361	NM_001168679	216350	Mm.22270	NM_146010	ENSMUSG00000034127	Tspan8	C76990|E330007O21Rik|Tm4sf3	tetraspanin 8	protein-coding
common_peak2-25622-10-7-0.356415345008769-1.12966497611638	chr19	9059444	9059872	+	0	NA	Intergenic	Intergenic	-4116	NR_104460	66395	Mm.203866	NM_009643	ENSMUSG00000069833	Ahnak	DY6	AHNAK nucleoprotein (desmoyokin)	protein-coding
common_peak2-23780-34-21-0.922636908363969-1.85054049304327	chr15	99333202	99333965	+	0	NA	intron (NM_001038658, intron 11 of 11)	RSINE1|SINE|B4	25013	NM_028224	72393	Mm.39760	NM_028224	ENSMUSG00000023011	Faim2	2900002L20Rik|Lfg|Lfg2|NMP25|Nmp35|Tmbim2	Fas apoptotic inhibitory molecule 2	protein-coding
unique_peak1-4689-8-3-1.00522241794757-1.39487600375387	chr3	96133352	96133876	+	0	NA	Intergenic	Intergenic	-35722	NM_010186	14129	Mm.150	NM_010186	ENSMUSG00000015947	Fcgr1	AI323638|AV092959|CD64|FcgammaRI|IGGHAFC	Fc receptor, IgG, high affinity I	protein-coding
unique_peak2-34949-2-7--1.91745425626332-1.45399745587252	chr15	90402475	90402899	+	0	NA	intron (NM_025815, intron 7 of 19)	intron (NM_025815, intron 7 of 19)	107132	NM_025815	66871	Mm.290991	NM_025815	ENSMUSG00000052560	Cpne8	1200003E11Rik|1500031E20Rik	copine VIII	protein-coding
common_peak2-25535-29-30-0.158093770228236-0.384630725886669	chr19	5877279	5878159	+	0	NA	promoter-TSS (NM_134154)	promoter-TSS (NM_134154)	-747	NM_134154	107375	Mm.5323	NM_134154	ENSMUSG00000024818	Slc25a45	AW491445	solute carrier family 25, member 45	protein-coding
unique_peak1-4245-11-0-3.50869358425161-3.61235994796777	chr2	126960799	126961270	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-1344	NM_144818	215387	Mm.29786	NM_144818	ENSMUSG00000034906	Ncaph	A730011O11Rik|Brrn1|HCAP-H|mKIAA0074	non-SMC condensin I complex, subunit H	protein-coding
common_peak1-8781-11-8-0.338768582809301-1.14218153353838	chr11	8676379	8676851	+	0	NA	Intergenic	Intergenic	-112077	NM_001083587	319939	Mm.337820	NM_001083587	ENSMUSG00000020422	Tns3	BC023928|F830010I22Rik|TEM6|Tens1	tensin 3	protein-coding
unique_peak1-3969-9-3-1.18961340640422-1.57096726280955	chr2	32154076	32154560	+	0	NA	intron (NM_001080968, intron 8 of 25)	intron (NM_001080968, intron 8 of 25)	10545	NM_001080968	99412	Mm.106376	NM_133852	ENSMUSG00000002546	Golga2	AW555139|GM130|mKIAA4150	golgi autoantigen, golgin subfamily a, 2	protein-coding
unique_peak2-33512-13-28--1.0795089644898-1.33403699391683	chr11	74837919	74838730	+	0	NA	intron (NM_001002764, intron 10 of 18)	L1_Mur2|LINE|L1	41169	NR_030454	735274		NR_030454		Mir684-1	Mirn684-1	microRNA 684-1	ncRNA
unique_peak1-5841-11-1-2.50869358425161-2.83420869758413	chr6	73254289	73254839	+	0	NA	Intergenic	Intergenic	56065	NM_019879	56451	Mm.29845	NM_019879	ENSMUSG00000052738	Suclg1	1500000I01Rik|Sucla1	succinate-CoA ligase, GDP-forming, alpha subunit	protein-coding
common_peak1-18113-11-14--0.398197011356905-0.379391706698377	chr8	3499864	3500444	+	0	NA	promoter-TSS (NM_053177)	promoter-TSS (NM_053177)	-365	NM_053177	94178	Mm.8356	NM_053177	ENSMUSG00000004567	Mcoln1	2210015I05Rik|TRPML1|mucolipidin	mucolipin 1	protein-coding
common_peak1-9211-53-46-0.586384160738291-1.46999668045562	chr11	83270957	83271823	+	0	NA	intron (NM_172797, intron 1 of 7)	intron (NM_172797, intron 1 of 7)	5073	NM_172797	118453	Mm.264648	NM_080453	ENSMUSG00000020682	Mmp28	D130023P12	matrix metallopeptidase 28 (epilysin)	protein-coding
unique_peak2-37875-6-12--1.13504160776079-1.45089835786865	chr5	138255648	138256362	+	0	NA	intron (NM_001005426, intron 11 of 16)	IAPEz-int|LTR|ERVK	21501	NM_153510	231805	Mm.379385	NM_153510	ENSMUSG00000046245	Pilra	AV021745|FDF03	paired immunoglobin-like type 2 receptor alpha	protein-coding
unique_peak1-2825-11-7-0.508693584251613-1.21681515183528	chr17	26663221	26663740	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	-18063	NM_013642	19252	Mm.239041	NM_013642	ENSMUSG00000024190	Dusp1	3CH134|MKP1|Ptpn16|U19515|erp|mkp-1	dual specificity phosphatase 1	protein-coding
unique_peak1-3467-19-4-2.08075923177432-3.05312482518673	chr19	10012718	10013747	+	0	NA	Intergenic	Intergenic	-39209	NM_016692	16319	Mm.29755	NM_016692	ENSMUSG00000024660	Incenp	2700067E22Rik|AU019509|C130081E20|C77457	inner centromere protein	protein-coding
common_peak1-13106-27-21-0.532114332257938-0.800403172662453	chr19	8757100	8757815	+	0	NA	3' UTR (NM_001112697, exon 3 of 3)	3' UTR (NM_001112697, exon 3 of 3)	18962	NM_001112697	12669	Mm.240607	NM_007698	ENSMUSG00000032773	Chrm1	Chrm-1|M1|M1R	cholinergic receptor, muscarinic 1, CNS	protein-coding
common_peak1-11907-10-17--0.813509656433543-0.699649909729472	chr17	25919112	25919628	+	0	NA	TTS (NM_001271434)	TTS (NM_001271434)	1617	NR_105932	102466776		NR_105932		Mir6966	mmu-mir-6966	microRNA mir-6966	ncRNA
common_peak2-23243-14-8-0.729291158915332-0.771068449301682	chr15	10689852	10690276	+	0	NA	intron (NR_045063, intron 2 of 6)	intron (NR_045063, intron 2 of 6)	45409	NR_045065	75259	Mm.33928	NR_045063	ENSMUSG00000097058	4930556M19Rik	1700009D01Rik|C130022M03Rik	RIKEN cDNA 4930556M19 gene	ncRNA
common_peak2-29930-8-12--0.695217300193522-0.475924844171029	chr6	115522387	115522900	+	0	NA	intron (NM_199033, intron 8 of 11)	intron (NM_199033, intron 8 of 11)	19951	NM_001101431	70291	Mm.133694	NM_001101431		Mkrn2os	2510049J12Rik	makorin, ring finger protein 2, opposite strand	protein-coding
unique_peak2-36273-7-8--0.370834171144123-1.00793137938329	chr2	60690441	60690911	+	0	NA	intron (NM_020296, intron 1 of 13)	intron (NM_020296, intron 1 of 13)	28819	NM_001141932	56878	Mm.259667	NM_020296	ENSMUSG00000026970	Rbms1	2600014B10Rik|AI255215|MSSP-1|MSSP-2|MSSP-3|YC1	RNA binding motif, single stranded interacting protein 1	protein-coding
unique_peak2-35731-6-8--0.60452689106201-1.03789460276074	chr18	35477339	35477860	+	0	NA	exon (NM_030749, exon 7 of 10)	exon (NM_030749, exon 7 of 10)	-102921	NM_178005	107065	Mm.39900	NM_178005	ENSMUSG00000071862	Lrrtm2	AI851755|BB129880|C630011A14Rik|mKIAA0416	leucine rich repeat transmembrane neuronal 2	protein-coding
unique_peak2-36666-3-7--1.41398308995928-1.23214870625617	chr3	27939231	27939619	+	0	NA	intron (NM_008875, intron 7 of 25)	intron (NM_008875, intron 7 of 25)	56332	NM_008875	18805	Mm.212039	NM_008875	ENSMUSG00000027695	Pld1	AA536939|C85393|Pld1a|Pld1b	phospholipase D1	protein-coding
common_peak2-20556-15-19--0.309763344331706-0.356936432242222	chr10	69929762	69930457	+	0	NA	intron (NM_024244, intron 3 of 13)	(TTTCC)n|Simple_repeat|Simple_repeat	26451	NM_001143776	71721	Mm.477813	NM_024244	ENSMUSG00000043259	Fam13c	1200015N20Rik|C030038O19Rik|mKIAA1796	family with sequence similarity 13, member C	protein-coding
unique_peak2-37966-11-16--0.578769256998726-0.503257505534083	chr6	87981085	87982135	+	0	NA	intron (NM_001293652, intron 1 of 7)	MTEa|LTR|MaLR	-11821	NM_001293655	19349	Mm.333233	NM_009005	ENSMUSG00000079477	Rab7	Rab7a	RAB7, member RAS oncogene family	protein-coding
unique_peak2-38101-4-6--0.830815435910851-0.989110657569874	chr6	66984305	66984667	+	0	NA	TTS (NM_007836)	TTS (NM_007836)	-2107	NR_040278	320172	Mm.449039	NR_040278	ENSMUSG00000087231	E230016M11Rik	-	RIKEN cDNA E230016M11 gene	ncRNA
unique_peak1-1788-7-1-1.79909083029819-1.80617997398389	chr14	16962348	16962794	+	0	NA	Intergenic	L1_Mus4|LINE|L1	-119257	NM_021504	59007	Mm.258381	NM_021504	ENSMUSG00000021785	Ngly1	1110002C09Rik|PNGase|Png1	N-glycanase 1	protein-coding
unique_peak2-32572-4-7--1.02346051385325-1.09384600808989	chr1	86486934	86487414	+	0	NA	Intergenic	Intergenic	1008211	NM_030194	109032	Mm.335802	NM_030194	ENSMUSG00000070034	Sp110	5031415C07Rik|52kDa|5830484A20Rik|ENSMUSG00000075603|Ifi75|Ipr1	Sp110 nuclear body protein	protein-coding
unique_peak2-36654-4-8--1.19338551529556-1.21878474469819	chr3	19187219	19187615	+	0	NA	intron (NM_001122759, intron 1 of 12)	intron (NM_001122759, intron 1 of 12)	-22409	NM_008802	18583	Mm.355614	NM_008802	ENSMUSG00000069094	Pde7a	AU015378|AW047537	phosphodiesterase 7A	protein-coding
unique_peak2-34548-4-5--0.608423014574403-0.909929411522249	chr14	60431403	60431826	+	0	NA	intron (NM_015803, intron 26 of 35)	ORR1A3|LTR|MaLR	187496	NM_145463	219134	Mm.275409	NM_145463	ENSMUSG00000044461	Shisa2	9430059P22Rik|MAd2|Tmem46|mShisa|shisa	shisa homolog 2 (Xenopus laevis)	protein-coding
common_peak1-9943-37-47--0.0589694292353373-0.303364957229384	chr12	110590880	110591825	+	0	NA	Intergenic	Lx2A|LINE|L1	-99681	NR_033813	13386	Mm.157069	NM_010052	ENSMUSG00000040856	Dlk1	AW742678|DLK-1|DlkI|FA1|Ly107|Peg9|SCP1|ZOG|pG2|pref-1	delta-like 1 homolog (Drosophila)	protein-coding
unique_peak1-6943-11-1-2.50869358425161-2.83420869758413	chr8	110802289	110802909	+	0	NA	Intergenic	Intergenic	305978	NR_077224	109215	Mm.65282	NR_077224		3010033K07Rik	-	RIKEN cDNA 3010033K07 gene	ncRNA
common_peak2-27571-9-12--0.510826311736872-0.394412252720706	chr3	98338413	98339065	+	0	NA	Intergenic	L1Md_T|LINE|L1	-24249	NM_008294	15495	Mm.14309	NM_008294	ENSMUSG00000095143	Hsd3b4	-	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 4	protein-coding
unique_peak1-3944-9-1-2.18961340640422-2.31132995230379	chr2	29622999	29623388	+	0	NA	Intergenic	ID_B1|SINE|B4	6145	NM_001177392	433416	Mm.330112	NM_001034887	ENSMUSG00000075425	Gm13547	OTTMUSG00000012686	predicted gene 13547	protein-coding
common_peak2-29457-43-54-0.0012034719990428-0.303022200133692	chr6	28423313	28424257	+	0	NA	Intergenic	B3|SINE|B2	-6563	NM_019776	56463	Mm.439987	NM_019776	ENSMUSG00000001424	Snd1	AL033314|Tudor-SN	staphylococcal nuclease and tudor domain containing 1	protein-coding
unique_peak2-34528-5-6--0.511735258063458-0.947717972411649	chr14	54577627	54578019	+	0	NA	Intergenic	Lx5|LINE|L1	292208	NM_001205242	100568452	Mm.213248	NM_001205242		A430107P09Rik	Va10	RIKEN cDNA A430107P09 gene	protein-coding
unique_peak1-6739-15-1-3.01216475055566-4.18809100057339	chr8	46631153	46631919	+	0	NA	intron (NM_172752, intron 1 of 22)	intron (NM_172752, intron 1 of 22)	38394	NM_001205219	234214	Mm.211096	NM_172752	ENSMUSG00000031626	Sorbs2	2010203O03Rik|9430041O17Rik|A530071H08|Argbp2|mKIAA0777	sorbin and SH3 domain containing 2	protein-coding
unique_peak1-6160-26-4-2.6059709972711-5.18764427570439	chr6	137703603	137704753	+	0	NA	intron (NM_172733, intron 1 of 8)	intron (NM_172733, intron 1 of 8)	1080	NM_172733	232449	Mm.29181	NM_172733	ENSMUSG00000030225	Dera	2010002D22Rik|2500002K03Rik|DEOC	2-deoxyribose-5-phosphate aldolase homolog (C. elegans)	protein-coding
common_peak2-27915-9-15--0.81038659359578-0.630231561310125	chr4	8691393	8692149	+	0	NA	intron (NM_001277149, intron 2 of 37)	intron (NM_001277149, intron 2 of 37)	74218	NM_001277149	320790	Mm.138792	NM_001033395	ENSMUSG00000041235	Chd7	A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis	chromodomain helicase DNA binding protein 7	protein-coding
unique_peak1-6039-7-1-1.79909083029819-1.80617997398389	chr6	115282907	115283428	+	0	NA	Intergenic	Intergenic	-28072	NM_001127330	19016	Mm.3020	NM_011146	ENSMUSG00000000440	Pparg	Nr1c3|PPAR-gamma|PPAR-gamma2|PPARgamma|PPARgamma2	peroxisome proliferator activated receptor gamma	protein-coding
common_peak1-9417-11-13--0.298661337805991-0.337263207250336	chr11	101087166	101087858	+	0	NA	intron (NM_007970, intron 1 of 20)	CpG	252	NM_007970	14055	Mm.5027	NM_007970	ENSMUSG00000006920	Ezh1	AW557915|mKIAA0388	enhancer of zeste homolog 1 (Drosophila)	protein-coding
common_peak2-28490-17-24--0.425559851569687-0.427564438475253	chr4	155783976	155784770	+	0	NA	Intergenic	Intergenic	-175407	NM_198305	231003	Mm.423038	NM_198305	ENSMUSG00000078484	Klhl17	AL022703|BC058738	kelch-like 17	protein-coding
unique_peak2-34356-2-6--1.72480917832092-1.26211192963361	chr13	101717261	101717638	+	0	NA	Intergenic	L1Md_T|LINE|L1	-114067	NM_022885	69048	Mm.402215	NM_022885	ENSMUSG00000021629	Slc30a5	1810010K08Rik|AF233321|ZNT5|ZTL1|ZnT-5|Zntl1	solute carrier family 30 (zinc transporter), member 5	protein-coding
common_peak1-7843-26-14-1.02100849654994-1.59386218057211	chr1	131278964	131280008	+	0	NA	intron (NM_172485, intron 1 of 27)	intron (NM_172485, intron 1 of 27)	109605	NM_172485	210417	Mm.380518	NM_172485	ENSMUSG00000042581	Thsd7b	1700074E13Rik|B930082A18|D130067I03Rik	thrombospondin, type I, domain containing 7B	protein-coding
common_peak1-13496-9-9--0.132314688483142-1.03275496310833	chr2	35684212	35684699	+	0	NA	intron (NM_029774, intron 6 of 9)	ORR1A4|LTR|MaLR	9745	NR_040618	77665	Mm.400558	NR_040618	ENSMUSG00000086449	9030204H09Rik	-	RIKEN cDNA 9030204H09 gene	ncRNA
common_peak2-29241-29-54--0.669069632909549-1.18863360106103	chr5	139371488	139372442	+	0	NA	Intergenic	Intergenic	75931	NM_001195128	384244	Mm.485002	NM_001195128	ENSMUSG00000094504	Gm5294	EG384244	predicted gene 5294	protein-coding
common_peak1-11837-28-20-0.660641697042702-1.00055860626307	chr16	85176516	85177603	+	0	NA	Intergenic	Intergenic	-3107	NM_001198826	11820	Mm.277585	NM_007471	ENSMUSG00000022892	App	Abeta|Abpp|Adap|Ag|Cvap|E030013M08Rik|betaApp	amyloid beta (A4) precursor protein	protein-coding
unique_peak2-35845-8-14--0.901668177660948-0.660903317613906	chr18	73815581	73816185	+	0	NA	intron (NM_008540, intron 8 of 11)	intron (NM_008540, intron 8 of 11)	47512	NM_008540	17128	Mm.100399	NM_008540	ENSMUSG00000024515	Smad4	AW743858|D18Wsu70e|DPC4|Madh4	SMAD family member 4	protein-coding
common_peak1-17338-42-29-0.835438732258665-1.96184293807029	chr6	148895555	148896828	+	0	NA	Intergenic	Intergenic	-1237	NM_019643	56306	Mm.18637	NM_019643	ENSMUSG00000039985	Fam60a	Ppcs1|Pptcs1|Tera	family with sequence similarity 60, member A	protein-coding
common_peak1-15068-28-9-1.7310310249341-3.46696221776358	chr3	126561331	126562467	+	0	NA	Intergenic	L1_Mur3|LINE|L1	84405	NM_001034168	109676	Mm.220242	NM_178655	ENSMUSG00000032826	Ank2	AI835472|AW491075|Ank-2	ankyrin 2, brain	protein-coding
common_peak1-19374-8-11--0.579740082773585-1.14218153353838	chrX	20961608	20961982	+	0	NA	Intergenic	Intergenic	23804	NR_045668	331392	Mm.23126	NM_198633	ENSMUSG00000051537	Gm5124	EG331392	nucleolar and coiled-body phosphoprotein 1 pseudogene	pseudo
common_peak1-19033-9-13--0.617741515653384-0.459837087125828	chr9	64253076	64253564	+	0	NA	intron (NM_172522, intron 1 of 22)	intron (NM_172522, intron 1 of 22)	19887	NM_001134399	214058	Mm.127721	NM_172522	ENSMUSG00000036466	Megf11	2410080H04Rik|D130061K05	multiple EGF-like-domains 11	protein-coding
unique_peak2-36200-11-9-0.186765489364251-0.344532117358383	chr2	32775781	32776275	+	0	NA	intron (NM_146119, intron 8 of 13)	intron (NM_146119, intron 8 of 13)	40747	NM_199302	227738	Mm.248037	NM_199302	ENSMUSG00000026792	Lrsam1	-	leucine rich repeat and sterile alpha motif containing 1	protein-coding
common_peak1-12721-29-40--0.245261924002973-0.373466121463214	chr18	53176153	53177238	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-159324	NM_026386	67804	Mm.252171	NM_026386	ENSMUSG00000034484	Snx2	0610030A03Rik	sorting nexin 2	protein-coding
common_peak1-19327-6-9--0.75652998450706-1.11707584880836	chr9	124422558	124422947	+	0	NA	Intergenic	Intergenic	386470	NM_009917	12774	Mm.14302	NM_009917	ENSMUSG00000079227	Ccr5	AM4-7|CD195|Cmkbr5	chemokine (C-C motif) receptor 5	protein-coding
common_peak2-25297-6-6--0.241956811677302-0.947717972411649	chr18	70599268	70599680	+	0	NA	Intergenic	Intergenic	-32634	NM_029019	170461	Mm.83623	NM_029019	ENSMUSG00000079608	Stard6	1700011K09Rik|4833424I06Rik|4933429L05Rik|AI644424	StAR-related lipid transfer (START) domain containing 6	protein-coding
common_peak1-16897-110-91-0.878435804321631-5.46137817681675	chr6	72292031	72294990	+	0	NA	intron (NM_138592, intron 1 of 12)	intron (NM_138592, intron 1 of 12)	1659	NM_138592	28035	Mm.281900	NM_138592	ENSMUSG00000056305	Usp39	AA408960|AI894154|CGI-21|D6Wsu157e|SAD1	ubiquitin specific peptidase 39	protein-coding
unique_peak2-32542-2-7--1.91745425626332-1.45399745587252	chr1	71101494	71101917	+	0	NA	intron (NM_007525, intron 6 of 10)	intron (NM_007525, intron 6 of 10)	47841	NM_007525	12021	Mm.10764	NM_007525	ENSMUSG00000026196	Bard1	ENSMUSG00000060893|ENSMUSG00000073653	BRCA1 associated RING domain 1	protein-coding
unique_peak2-38973-6-19--1.75652998450706-1.84350559086818	chr8	35587715	35588418	+	0	NA	Intergenic	Intergenic	115304	NR_040706	330734	Mm.149998	NR_040706		B930018H19Rik	B930018H19	RIKEN cDNA B930018H19 gene	ncRNA
common_peak2-24151-28-36--0.156494245807488-0.329362479200675	chr16	38522102	38523163	+	0	NA	5' UTR (NM_024273, exon 1 of 7)	5' UTR (NM_024273, exon 1 of 7)	115	NM_024273	76916	Mm.132231	NM_024273		Timmdc1	2810021C21Rik|4930455C21Rik|AV135763	translocase of inner mitochondrial membrane domain containing 1	protein-coding
unique_peak1-2289-12-6-0.841421063030034-1.58711810488664	chr15	80036822	80037449	+	0	NA	intron (NM_010795, intron 1 of 1)	intron (NM_010795, intron 1 of 1)	-27375	NM_178719	239555	Mm.307163	NM_178719	ENSMUSG00000022412	Mief1	A230016E22|AI452372|Smcr7l	mitochondrial elongation factor 1	protein-coding
common_peak2-23437-7-6--0.00826409175941478-0.97990265578305	chr15	62261177	62261491	+	0	NA	Intergenic	Intergenic	-210328	NR_003523	67552	Mm.484027	NM_026230		H2afy3	4933432H23Rik	H2A histone family, member Y3	pseudo
common_peak1-19479-23-38--0.563634714353168-0.792515101870073	chrX	137037830	137038690	+	0	NA	Intergenic	(TTTG)n|Simple_repeat|Simple_repeat	38947	NR_122039	14605	Mm.22216	NM_010286	ENSMUSG00000031431	Tsc22d3	DIP|Dsip1|Gilz|TSC-22R|Tilz3	TSC22 domain family, member 3	protein-coding
common_peak1-19176-20-11-0.903112283870037-1.11267835143409	chr9	96863483	96864515	+	0	NA	intron (NM_145134, intron 2 of 2)	intron (NM_145134, intron 2 of 2)	54775	NM_145134	211949	Mm.491271	NM_145134	ENSMUSG00000046997	Spsb4	D030068E18Rik|SSB-4|Ssb4	splA/ryanodine receptor domain and SOCS box containing 4	protein-coding
common_peak2-20104-14-16--0.188246680892695-0.308035960714963	chr1	160195235	160195864	+	0	NA	intron (NM_207583, intron 4 of 7)	L2a|LINE|L2	90842	NM_207583	240843	Mm.329579	NM_207583	ENSMUSG00000004031	Brinp2	6430517E21Rik|BB361039|Fam5b|mKIAA1747	bone morphogenic protein/retinoic acid inducible neural-specific 2	protein-coding
common_peak1-11863-20-10-1.0286431659539-1.30248952876293	chr16	92610472	92611243	+	0	NA	intron (NM_001111022, intron 6 of 6)	intron (NM_001111022, intron 6 of 6)	86717	NM_001111023	12394	Mm.4081	NM_009821	ENSMUSG00000022952	Runx1	AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b	runt related transcription factor 1	protein-coding
unique_peak2-39722-7-11--0.785871670422967-1.21681515183528	chr9	120919005	120919555	+	0	NA	intron (NM_177589, intron 35 of 36)	intron (NM_177589, intron 35 of 36)	55076	NR_106058	102465661		NR_106058		Mir7090	mmu-mir-7090	microRNA mir-7090	ncRNA
common_peak1-14202-22-15-0.647284105087405-0.849699271740893	chr2	148196944	148197891	+	0	NA	Intergenic	Intergenic	-23696	NM_009219	20608	Mm.35324	NM_009219	ENSMUSG00000037014	Sstr4	Smstr4|sst4	somatostatin receptor 4	protein-coding
common_peak1-8656-13-21--0.680959587999529-0.607095980551316	chr10	127668148	127668703	+	0	NA	promoter-TSS (NM_001164080)	promoter-TSS (NM_001164080)	-694	NM_001164080	21853	Mm.6458	NM_011589	ENSMUSG00000039994	Timeless	C77407|Debt69|tim	timeless circadian clock 1	protein-coding
common_peak1-19347-6-9--0.75652998450706-1.11707584880836	chrX	8132547	8133067	+	0	NA	Intergenic	L1Md_A|LINE|L1	-7426	NM_001205108	668976	Mm.227643	NM_001205108	ENSMUSG00000079702	Ssxb6	-	synovial sarcoma, X member B, breakpoint 6	protein-coding
common_peak2-20299-24-7-1.79320990276772-3.23080944932562	chr1	193544796	193545180	+	0	NA	intron (NM_001134829, intron 2 of 7)	intron (NM_001134829, intron 2 of 7)	2714	NM_001134829	226856	Mm.277958	NM_172266	ENSMUSG00000026623	Lpgat1	AI649174|AW112037|BC013667	lysophosphatidylglycerol acyltransferase 1	protein-coding
unique_peak2-33684-1-9--2.94898510510411-2.31132995230379	chr11	103084450	103084817	+	0	NA	intron (NM_016896, intron 14 of 15)	intron (NM_016896, intron 14 of 15)	-4887	NM_177801	328019	Mm.189646	NM_177801	ENSMUSG00000044787	Spata32	4933400C05Rik|VAD1.2	spermatogenesis associated 32	protein-coding
common_peak1-9611-102-174--0.180122634992775-0.566008046006805	chr11	120632256	120633789	+	0	NA	Intergenic	L1Md_T|LINE|L1	12496	NM_009053	19719	Mm.871	NM_009053	ENSMUSG00000025158	Rfng	-	RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase	protein-coding
common_peak2-23905-26-20-0.535581669379702-0.738267116931592	chr16	4718799	4719442	+	0	NA	5' UTR (NM_026393, exon 1 of 6)	5' UTR (NM_026393, exon 1 of 6)	236	NM_001290763	67824	Mm.28451	NM_026393	ENSMUSG00000063445	Nmral1	1110025F24Rik|AI256624	NmrA-like family domain containing 1	protein-coding
common_peak1-19037-7-18--1.4488366831454-1.38887104242188	chr9	65020922	65021443	+	0	NA	intron (NM_008988, intron 2 of 13)	intron (NM_008988, intron 2 of 13)	32186	NM_008988	19289	Mm.41529	NM_008988	ENSMUSG00000032394	Igdcc3	2810401C09Rik|AI851425|Punc|WI-14920	immunoglobulin superfamily, DCC subclass, member 3	protein-coding
common_peak1-15830-13-24--0.865384159136956-0.879255460030357	chr5	129908476	129909119	+	0	NA	Intergenic	Intergenic	-98309	NM_172276	231769	Mm.288714	NM_172276	ENSMUSG00000029439	Sfswap	1190005N23Rik|6330437E22Rik|AI197402|AW212079|SWAP|Sfrs8|Srsf8	splicing factor, suppressor of white-apricot homolog (Drosophila)	protein-coding
common_peak1-14292-27-31--0.00845404910476422-0.304476922018591	chr2	158028191	158029101	+	0	NA	intron (NM_001131021, intron 11 of 15)	intron (NM_001131021, intron 11 of 15)	10902	NR_036606	73399	Mm.416861	NR_036606	ENSMUSG00000078957	1700060C20Rik	-	RIKEN cDNA 1700060C20 gene	ncRNA
common_peak1-17863-19-16-0.315224485411347-0.448200956659575	chr7	113461277	113462184	+	0	NA	Intergenic	MTD|LTR|MaLR	6312	NR_030720	668128	Mm.484022	NR_030720		Gm8989	EG668128|Gm21911	very large inducible GTPase 1 pseudogene	pseudo
unique_peak2-36858-12-12--0.0516637330534535-0.309718203022949	chr3	89526208	89526905	+	0	NA	intron (NM_001038587, intron 1 of 14)	B3|SINE|B2	7612	NM_001038587	56417	Mm.316628	NM_019655	ENSMUSG00000027951	Adar	AV242451|Adar1|Adar1p110|Adar1p150|mZaADAR	adenosine deaminase, RNA-specific	protein-coding
common_peak2-28713-23-8-1.55184250306677-2.47979361197949	chr5	35720519	35720978	+	0	NA	Intergenic	Intergenic	-11018	NM_010445	15371	Mm.358606	NM_010445	ENSMUSG00000067438	Hmx1	Nkx5-3	H6 homeobox 1	protein-coding
common_peak2-31011-12-8-0.478850983645327-0.562038191119709	chr8	10978245	10978668	+	0	NA	Intergenic	Intergenic	-29394	NR_046017	619321	Mm.403007	NR_046017	ENSMUSG00000096938	9530052E02Rik	-	RIKEN cDNA 9530052E02 gene	ncRNA
unique_peak2-39220-4-8--1.19338551529556-1.21878474469819	chr8	108716654	108717130	+	0	NA	intron (NM_178798, intron 4 of 9)	intron (NM_178798, intron 4 of 9)	17941	NM_001007567	66432	Mm.269029	NM_001007567	ENSMUSG00000033106	Slc7a6os	2010007L18Rik|2400002F02Rik	solute carrier family 7, member 6 opposite strand	protein-coding
common_peak2-24099-27-33--0.0959168903551033-0.304370854244436	chr16	32332046	32333125	+	0	NA	intron (NM_177633, intron 1 of 10)	CpG	247	NM_177633	224111	Mm.31275	NM_177633	ENSMUSG00000053774	Ubxn7	A630090P18|AI196514|Ubxd7|mKIAA0794	UBX domain protein 7	protein-coding
unique_peak1-578-12-4-1.32684789020028-2.04196296489515	chr10	4281751	4282276	+	0	NA	Intergenic	ETnERV2-int|LTR|ERVK	-142128	NM_001161822	56533	Mm.44606	NM_019958	ENSMUSG00000019775	Rgs17	6430507P11Rik|Rgsz2	regulator of G-protein signaling 17	protein-coding
common_peak1-10395-9-7-0.18961340640422-1.05908390183068	chr13	96938158	96938675	+	0	NA	Intergenic	Intergenic	-35884	NM_029210	75209	Mm.40436	NM_029210	ENSMUSG00000051111	Sv2c	4930527L09Rik|AI841971	synaptic vesicle glycoprotein 2c	protein-coding
unique_peak1-5789-10-2-1.77145284428761-2.09384600808989	chr6	57813831	57814562	+	0	NA	Intergenic	Lx3A|LINE|L1	-19745	NM_134183	171201	Mm.377179	NM_134183	ENSMUSG00000058588	Vmn1r21	V1rc28	vomeronasal 1 receptor 21	protein-coding
unique_peak1-2088-15-6-1.20480982849805-1.32521814697968	chr15	36931185	36931888	+	0	NA	intron (NM_026521, intron 3 of 3)	B2_Mm1a|SINE|B2	5621	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
unique_peak2-34085-6-10--0.894033508256995-1.21398586181642	chr13	8870562	8871008	+	0	NA	promoter-TSS (NM_001039389)	promoter-TSS (NM_001039389)	197	NM_001039388	207615	Mm.284654	NM_172445	ENSMUSG00000021147	Wdr37	-	WD repeat domain 37	protein-coding
common_peak2-22229-21-26--0.185398236897233-0.318406410381916	chr13	34077491	34078785	+	0	NA	3' UTR (NM_001163239, exon 6 of 6)	3' UTR (NM_001163239, exon 6 of 6)	16525	NM_001243192	20719	Mm.252210	NM_009254	ENSMUSG00000060147	Serpinb6a	4930482L21Rik|D330015H01Rik|PI-6|Serpinb6|Spi3|ovalbumin	serine (or cysteine) peptidase inhibitor, clade B, member 6a	protein-coding
common_peak2-23487-8-8--0.164702583494742-1.00793137938329	chr15	75748452	75748836	+	0	NA	intron (NM_025412, intron 4 of 5)	intron (NM_025412, intron 4 of 5)	3346	NM_025412	66194	Mm.250599	NM_025412	ENSMUSG00000022571	Pycrl	1110058B13Rik|2700073G24Rik	pyrroline-5-carboxylate reductase-like	protein-coding
common_peak1-18500-50-89--0.450912779850722-1.0448764443464	chr8	85840105	85841812	+	0	NA	intron (NM_178736, intron 7 of 8)	intron (NM_178736, intron 7 of 8)	15427	NM_001170691	244548	Mm.38762	NM_178736	ENSMUSG00000035151	Elmod2	9830169G11Rik	ELMO/CED-12 domain containing 2	protein-coding
unique_peak2-36433-5-7--0.704380336005853-1.01466476204226	chr2	131159618	131160030	+	0	NA	intron (NM_178607, intron 1 of 5)	intron (NM_178607, intron 1 of 5)	18804	NM_178607	51902	Mm.477523	NM_178607	ENSMUSG00000048911	Rnf24	2810473M14Rik|4930505A13Rik|AI317164|C86507|D2Ertd504e	ring finger protein 24	protein-coding
common_peak1-16082-16-21--0.341167976369236-0.392630012299441	chr5	64092895	64093687	+	0	NA	intron (NM_177006, intron 1 of 6)	intron (NM_177006, intron 1 of 6)	52949	NM_177006	319807	Mm.319487	NM_028470	ENSMUSG00000090061	Nwd2	3110047P20Rik|B830017A01Rik|Hn1-ps2|mKIAA1239	NACHT and WD repeat domain containing 2	protein-coding
unique_peak1-3401-10-4-1.03448725012141-1.5150158574804	chr19	4498504	4499090	+	0	NA	promoter-TSS (NM_027237)	promoter-TSS (NM_027237)	-214	NM_027237	69861	Mm.282978	NM_027237	ENSMUSG00000042041	2010003K11Rik	-	RIKEN cDNA 2010003K11 gene	protein-coding
common_peak2-20505-24-47--0.791752597953439-1.35770911664594	chr10	59615662	59616947	+	0	NA	Intergenic	Intergenic	26780	NR_105871	102465546		NR_105871		Mir6906	mmu-mir-6906	microRNA mir-6906	ncRNA
common_peak2-21106-22-18-0.399356591643819-0.549581527953406	chr11	52094609	52095313	+	0	NA	intron (NM_009331, intron 1 of 8)	intron (NM_009331, intron 1 of 8)	791	NM_009331	21414	Mm.31630	NM_009331	ENSMUSG00000000782	Tcf7	AI465550|TCF-1|Tcf1	transcription factor 7, T cell specific	protein-coding
common_peak1-19144-9-11--0.395349094316936-0.344532117358383	chr9	86467317	86467854	+	0	NA	exon (NM_001145968, exon 3 of 3)	exon (NM_001145968, exon 3 of 3)	1925	NM_027100	69519	Mm.272517	NM_027100	ENSMUSG00000032417	Rwdd2a	1700030C20Rik|AI848608|Rwdd2	RWD domain containing 2A	protein-coding
common_peak1-18265-96-69-1.03676819741036-6.16034966222747	chr8	34804287	34806390	+	0	NA	intron (NM_010344, intron 11 of 12)	intron (NM_010344, intron 11 of 12)	-37048	NM_001167921	68153	Mm.286104	NM_026584	ENSMUSG00000031585	Gtf2e2	34kDa|AI462509|C330006J08Rik	general transcription factor II E, polypeptide 2 (beta subunit)	protein-coding
common_peak1-10850-32-39--0.0428360756677026-0.301029995663967	chr14	120477661	120478642	+	0	NA	Intergenic	Intergenic	-36494	NM_001001490	239283	Mm.138520	NM_001001490	ENSMUSG00000044819	Oxgr1	Cysltr3|Gm299|Gpr80|Gpr99|P2Y15	oxoglutarate (alpha-ketoglutarate) receptor 1	protein-coding
unique_peak1-366-12-1-2.64877598508764-3.36932189928148	chr1	141466645	141467262	+	0	NA	Intergenic	Lx6|LINE|L1	-10154	NM_015780	50702	Mm.220362	NM_015780	ENSMUSG00000057037	Cfhr1	AI194696|CFHRB|Cfhl1	complement factor H-related 1	protein-coding
unique_peak1-2219-8-4-0.683294323060208-1.21878474469819	chr15	73569254	73569738	+	0	NA	intron (NM_001166388, intron 1 of 5)	MIRm|SINE|MIR	-8960	NM_008975	19245	Mm.390807	NM_008975	ENSMUSG00000059895	Ptp4a3	AV088979|Prl-3|pPtp4a3	protein tyrosine phosphatase 4a3	protein-coding
unique_peak1-7201-9-4-0.867685311516858-1.36011389749466	chr9	66511792	66512291	+	0	NA	Intergenic	B1_Mur2|SINE|Alu	-49452	NM_178396	76459	Mm.277921	NM_178396	ENSMUSG00000032373	Car12	2310047E01Rik|AI314958|Ca12	carbonic anyhydrase 12	protein-coding
common_peak2-25371-8-8--0.164702583494742-1.00793137938329	chr18	82750841	82751351	+	0	NA	intron (NM_001025258, intron 4 of 4)	intron (NM_001025258, intron 4 of 4)	27196	NM_001025254	17196	Mm.252063	NM_010777	ENSMUSG00000041607	Mbp	C76307|Hmbpr|R75289|golli-mbp|mld|shi	myelin basic protein	protein-coding
common_peak2-25521-103-89-0.796144649530365-4.33083619872212	chr19	5800328	5801721	+	0	NA	non-coding (NR_002847, exon 1 of 1)	non-coding (NR_002847, exon 1 of 1)	1647	NR_002847	72289	Mm.298256	NR_002847	ENSMUSG00000092341	Malat1	2210401K01Rik|9430072K23Rik|AI647968|Neat2	metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)	ncRNA
unique_peak1-3816-18-4-1.99099105634099-2.82951996911245	chr2	30850821	30851895	+	0	NA	intron (NM_028846, intron 1 of 24)	intron (NM_028846, intron 1 of 24)	13559	NM_028846	74270	Mm.346654	NM_028846	ENSMUSG00000026854	Usp20	1700055M05Rik|AI467231|Vdu2	ubiquitin specific peptidase 20	protein-coding
common_peak1-12325-14-13-0.0918612383000403-0.332077462497413	chr17	48001622	48002218	+	0	NA	Intergenic	B3|SINE|B2	-30280	NM_001109973	17240	Mm.329100	NM_010783	ENSMUSG00000032717	Mdfi	I-mf|I-mfa	MyoD family inhibitor	protein-coding
common_peak1-18431-19-25--0.297752391479405-0.376654945067947	chr8	79028256	79028928	+	0	NA	Intergenic	Intergenic	395480	NR_028579	100039211	Mm.367571	NR_028579	ENSMUSG00000074235	Gm10649	ENSMUSG00000074235	predicted gene 10649	ncRNA
common_peak1-8583-35-38-0.145968039600255-0.368093376636814	chr10	99242313	99243772	+	0	NA	Intergenic	L1Md_F3|LINE|L1	-20750	NM_027945	71832	Mm.483162	NM_027945	ENSMUSG00000046934	Csl	1700007H16Rik	citrate synthase like	protein-coding
common_peak1-8479-7-7--0.200909169701811-0.97990265578305	chr10	80435292	80435783	+	0	NA	intron (NM_010319, intron 2 of 3)	intron (NM_010319, intron 2 of 3)	28573	NM_001038655	14708	Mm.222496	NM_010319	ENSMUSG00000048240	Gng7	AI840417	guanine nucleotide binding protein (G protein), gamma 7	protein-coding
unique_peak1-4466-12-4-1.32684789020028-2.04196296489515	chr2	180232494	180233014	+	0	NA	Intergenic	Intergenic	-1927	NM_018766	18216	Mm.301712	NM_018766	ENSMUSG00000027568	Ntsr1	NT-1R|NTR-1|NTR1	neurotensin receptor 1	protein-coding
unique_peak2-39997-4-11--1.6084230145744-1.68134727924692	chrX	163909125	163909577	+	0	NA	3' UTR (NM_001290428, exon 17 of 17)	3' UTR (NM_001290428, exon 17 of 17)	-88720	NM_026662	110639	Mm.272955	NM_026662	ENSMUSG00000025742	Prps2	2610101M19Rik|AA589463|AI464149|Prps-2	phosphoribosyl pyrophosphate synthetase 2	protein-coding
common_peak1-8213-92-170--0.325500431183134-1.12306033813495	chr10	7955378	7957186	+	0	NA	intron (NM_177387, intron 7 of 7)	B2_Mm2|SINE|B2	-280361	NM_138667	68652	Mm.193041	NM_138667	ENSMUSG00000015755	Tab2	1110030N06Rik|A530078N03Rik|Map3k7ip2|mKIAA0733	TGF-beta activated kinase 1/MAP3K7 binding protein 2	protein-coding
common_peak1-9645-27-53--0.763341551268232-1.43939133646632	chr12	73907848	73908951	+	0	NA	Intergenic	Intergenic	46201	NM_008910	19042	Mm.261045	NM_008910	ENSMUSG00000021096	Ppm1a	2310003C21Rik|2900017D14Rik|AI427932|AU017636|MMPa-2|MPPa-1	protein phosphatase 1A, magnesium dependent, alpha isoform	protein-coding
common_peak1-8107-28-31-0.0529591198214625-0.314603908022751	chr1	182408567	182409708	+	0	NA	intron (NM_001081227, intron 1 of 3)	intron (NM_001081227, intron 1 of 3)	4498	NM_001081227	381310	Mm.44791	NM_001081227	ENSMUSG00000053963	6330403A02Rik	ENSMUSG00000056615|Gm10001|R75555	RIKEN cDNA 6330403A02 gene	protein-coding
common_peak2-20342-5-6--0.511735258063458-0.947717972411649	chr10	5497806	5498208	+	0	NA	intron (NM_007956, intron 4 of 8)	L1Md_F2|LINE|L1	220529	NM_022027	64009	Mm.331626	NM_022027	ENSMUSG00000019769	Syne1	8B|A330049M09Rik|BE692247|C130039F11Rik|CPG2|Myne1|mKIAA1756	spectrin repeat containing, nuclear envelope 1	protein-coding
unique_peak2-32534-12-10-0.189344366450341-0.386243247519795	chr1	64787328	64787984	+	0	NA	Intergenic	(TTTG)n|Simple_repeat|Simple_repeat	-3332	NM_022721	14367	Mm.150813	NM_022721	ENSMUSG00000045005	Fzd5	5330434N09Rik|AI427138|Fz-5|Fz5|mFz5	frizzled homolog 5 (Drosophila)	protein-coding
unique_peak2-33043-8-5-0.420259917226415-1.10484139239135	chr10	74833397	74833777	+	0	NA	Intergenic	L1_Mus3|LINE|L1	18787	NR_033602	544707	Mm.349862	NR_033602		Gm5779	EG544707	ribosomal protein, large, P0 pseudogene	pseudo
unique_peak2-33455-5-6--0.511735258063458-0.947717972411649	chr11	64979041	64979477	+	0	NA	Intergenic	MTE2b|LTR|MaLR	-2796	NM_175003	216831	Mm.134338	NM_175003	ENSMUSG00000033389	Arhgap44	6330543G20|AI840762|AU040829|AW493732|Rich2	Rho GTPase activating protein 44	protein-coding
common_peak1-12360-21-38--0.715912953596013-0.993451450456403	chr17	57030856	57031742	+	0	NA	TTS (NM_022328)	TTS (NM_022328)	16243	NM_030141	78625	Mm.160106	NM_030141	ENSMUSG00000024209	1700061G19Rik	1700026H02|AI507598	RIKEN cDNA 1700061G19 gene	protein-coding
unique_peak1-4899-8-3-1.00522241794757-1.39487600375387	chr4	45492434	45492951	+	0	NA	intron (NM_001033306, intron 2 of 5)	intron (NM_001033306, intron 2 of 5)	51008	NM_001033306	230126	Mm.251716	NM_001033306	ENSMUSG00000044813	Shb	BC028832	src homology 2 domain-containing transforming protein B	protein-coding
common_peak1-17003-17-17-0.0483713367627256-0.325169893479371	chr6	89344988	89345765	+	0	NA	intron (NM_001167736, intron 5 of 6)	L1MC|LINE|L1	-32769	NM_008881	18844	Mm.3789	NM_008881	ENSMUSG00000030084	Plxna1	2600013D04Rik|NOV|PlexA1|Plxn1|mKIAA4053	plexin A1	protein-coding
unique_peak2-37283-9-8-0.0196884049619079-1.03275496310833	chr4	117251906	117252389	+	0	NA	intron (NM_001285901, intron 2 of 7)	intron (NM_001285901, intron 2 of 7)	29177	NM_080469	140546	Mm.235891	NM_080469	ENSMUSG00000033423	Eri3	PINT1|Prnpip1	exoribonuclease 3	protein-coding
unique_peak2-36970-0-11--4.42509343119537-2.83420869758413	chr3	113375303	113375780	+	0	NA	Intergenic	L1Md_T|LINE|L1	-42474	NM_001038696	67225	Mm.316928	NM_026043	ENSMUSG00000027981	Rnpc3	2810441O16Rik|AI447568|C030014B17Rik	RNA-binding region (RNP1, RRM) containing 3	protein-coding
common_peak1-18041-11-5-0.923731083530457-1.477227296591	chr7	143798642	143799163	+	0	NA	Intergenic	Intergenic	103385	NR_046021	621677	Mm.207290	NR_046021		Gm6249	EG621677	predicted gene 6249	ncRNA
unique_peak2-33253-4-5--0.608423014574403-0.909929411522249	chr10	128082545	128082941	+	0	NA	intron (NM_011772, intron 1 of 7)	intron (NM_011772, intron 1 of 7)	306	NM_011772	22781	Mm.358648	NM_011772	ENSMUSG00000002578	Ikzf4	A630026H08Rik|Eos|Zfpn1a4|Znfn1a4	IKAROS family zinc finger 4	protein-coding
unique_peak1-4768-8-0-3.00522241794757-2.70926996097583	chr3	122693525	122694008	+	0	NA	Intergenic	B3|SINE|B2	-6401	NM_133857	99526	Mm.491248	NM_133857	ENSMUSG00000039701	Usp53	AA939927|Phxr3|Sp6|mKIAA1350	ubiquitin specific peptidase 53	protein-coding
common_peak2-21221-88-103-0.314972691029441-0.935083268254793	chr11	62494349	62496544	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	33280	NM_175002	216829	Mm.295306	NM_175002		Mmgt2	AI852046	membrane magnesium transporter 2	protein-coding
common_peak1-7436-47-55-0.127486502708944-0.368450600203463	chr1	63176483	63177590	+	0	NA	intron (NR_045914, intron 1 of 3)	intron (NR_045914, intron 1 of 3)	15722	NR_045914	100380944	Mm.392955	NR_045914	ENSMUSG00000084799	Ino80dos	Gm11602|OTTMUSG00000002611	INO80 complex subunit D, opposite strand	ncRNA
unique_peak2-39430-4-11--1.6084230145744-1.68134727924692	chr9	44418011	44418502	+	0	NA	intron (NM_007841, intron 2 of 13)	intron (NM_007841, intron 2 of 13)	5281	NM_181324	13209	Mm.267061	NM_007841	ENSMUSG00000032097	Ddx6	1110001P04Rik|E230023J21Rik|HLR2|mRCK/P54|p54|rck	DEAD (Asp-Glu-Ala-Asp) box polypeptide 6	protein-coding
unique_peak2-36534-6-8--0.60452689106201-1.03789460276074	chr2	164074210	164074640	+	0	NA	Intergenic	Lx9|LINE|L1	7954	NM_173377	329557	Mm.118769	NM_173377	ENSMUSG00000050383	Svs3b	9530004A22Rik	seminal vesicle secretory protein 3B	protein-coding
common_peak2-23520-28-32-0.00856500046300912-0.30437085424443	chr15	76925069	76926007	+	0	NA	intron (NM_001110827, intron 10 of 13)	intron (NM_001110827, intron 10 of 13)	10710	NR_108037	74303	Mm.444304	NR_108037	ENSMUSG00000097267	1700109K24Rik	4933425G21Rik	RIKEN cDNA 1700109K24 gene	ncRNA
common_peak2-28787-9-17--0.980311595038092-0.844317084070804	chr5	64092923	64093392	+	0	NA	intron (NM_177006, intron 1 of 6)	intron (NM_177006, intron 1 of 6)	52815	NM_177006	319807	Mm.319487	NM_028470	ENSMUSG00000090061	Nwd2	3110047P20Rik|B830017A01Rik|Hn1-ps2|mKIAA1239	NACHT and WD repeat domain containing 2	protein-coding
unique_peak1-6420-11-3-1.50869358425161-1.95434855131066	chr7	88199547	88200057	+	0	NA	Intergenic	Intergenic	-2684	NM_054085	116904	Mm.475768	NM_054085	ENSMUSG00000038763	Alpk3	AW319487|D330016D04|MAK|Midori|mKIAA1330	alpha-kinase 3	protein-coding
common_peak2-29029-17-26--0.53659116395843-0.538442145997695	chr5	113907980	113908673	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-11141	NM_177292	320916	Mm.102783	NM_177292	ENSMUSG00000063430	Wscd2	4933413A10Rik|C530024P05Rik|Gm450	WSC domain containing 2	protein-coding
common_peak2-29390-14-18--0.348711353085941-0.360333814299795	chr6	70844412	70845132	+	0	NA	intron (NM_010121, intron 13 of 16)	intron (NM_010121, intron 13 of 16)	24144	NM_028825	74221	Mm.273326	NM_028825	ENSMUSG00000051896	Tex37	1700011F03Rik	testis expressed 37	protein-coding
common_peak2-29540-14-5-1.31425365963649-1.4372489031793	chr6	39013902	39014166	+	0	NA	non-coding (NR_040523, exon 4 of 4)	non-coding (NR_040523, exon 4 of 4)	3551	NR_040523	69986	Mm.490941	NR_040523		1700025N23Rik	-	RIKEN cDNA 1700025N23 gene	ncRNA
common_peak2-29140-206-185-0.953478642401157-12.7219539225446	chr5	125388406	125391730	+	0	NA	Intergenic	ORR1C2|LTR|MaLR	46993	NM_001081750	269704	Mm.138617	NM_001081750	ENSMUSG00000079215	Zfp664	AW060232|D930038J03Rik|ZFOC1|Znf664	zinc finger protein 664	protein-coding
common_peak2-26239-16-21--0.341167976369236-0.392630012299441	chr2	28839872	28840844	+	0	NA	intron (NM_001166705, intron 2 of 5)	MTE2a|LTR|MaLR	-68398	NM_001164186	54422	Mm.21390	NM_019446	ENSMUSG00000026805	Barhl1	Dres115|MBH2	BarH-like 1 (Drosophila)	protein-coding
common_peak2-27883-27-36--0.217907414733714-0.352152970649951	chr4	116768417	116769313	+	0	NA	promoter-TSS (NM_008958)	promoter-TSS (NM_008958)	-96	NM_008958	19207	Mm.287037	NM_008958	ENSMUSG00000028681	Ptch2	ptc2	patched homolog 2	protein-coding
common_peak2-30584-10-17--0.813509656433543-0.699649909729472	chr7	80375593	80376214	+	0	NA	Intergenic	Intergenic	-79363	NR_105062	100505025	Mm.445959	NR_105062		LOC100505025	-	uncharacterized LOC100505025	ncRNA
common_peak1-13292-27-33--0.0959168903551033-0.304370854244436	chr19	38480853	38481880	+	0	NA	Intergenic	Intergenic	10896	NM_175507	240660	Mm.262085	NM_175507	ENSMUSG00000044026	Slc35g1	AA590464|D330039I19Rik|Tmem20	solute carrier family 35, member G1	protein-coding
common_peak1-14900-12-11-0.0638134843664826-0.337263207250336	chr3	96488355	96488920	+	0	NA	exon (NM_001081139, exon 10 of 13)	exon (NM_001081139, exon 10 of 13)	-11661	NM_146135	229615	Mm.1635	NM_018812	ENSMUSG00000028101	Pias3	Pias3l	protein inhibitor of activated STAT 3	protein-coding
common_peak2-21038-59-81--0.0321880037455058-0.302378744963234	chr11	35769322	35770239	+	0	NA	intron (NM_170779, intron 1 of 22)	PB1D10|SINE|Alu	23811	NM_170779	211652	Mm.31267	NM_170779		Wwc1	AA408228|AU017197|BC037006|Kibra|mKIAA0869	WW, C2 and coiled-coil domain containing 1	protein-coding
unique_peak2-35415-4-6--0.830815435910851-0.989110657569874	chr17	33903525	33903960	+	0	NA	Intergenic	Intergenic	-6311	NM_008997	19326	Mm.387587	NM_008997	ENSMUSG00000077450	Rab11b	A730055L17Rik	RAB11B, member RAS oncogene family	protein-coding
common_peak2-29722-93-85-0.684805108804171-3.06265717807747	chr6	84265992	84268160	+	0	NA	Intergenic	Intergenic	106756	NR_046063	100038556	Mm.387783	NR_046063		Gm10445	ENSMUSG00000072956	predicted gene 10445	ncRNA
common_peak2-25123-23-17-0.551842503066768-0.713114929964887	chr18	38865898	38866804	+	0	NA	Intergenic	PB1D10|SINE|Alu	-105429	NM_011898	24066	Mm.42038	NM_011898	ENSMUSG00000024427	Spry4	A030006O18Rik|sprouty4	sprouty homolog 4 (Drosophila)	protein-coding
common_peak2-21027-9-17--0.980311595038092-0.844317084070804	chr11	32226436	32226902	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-21142	NM_177364	268396	Mm.227616	NM_177364	ENSMUSG00000040711	Sh3pxd2b	G431001E03Rik|TSK4|fad49	SH3 and PX domains 2B	protein-coding
common_peak1-17531-12-8-0.478850983645327-0.562038191119709	chr7	28577239	28577917	+	0	NA	Intergenic	PB1D10|SINE|Alu	26886	NR_033484	100043229	Mm.458666	NR_033484		Gm10046	ENSMUSG00000058661	predicted gene 10046	ncRNA
unique_peak1-6681-9-1-2.18961340640422-2.31132995230379	chr8	25149781	25150253	+	0	NA	intron (NM_177086, intron 6 of 6)	MTE2b|LTR|MaLR	369884	NM_177086	320158	Mm.121274	NM_177086	ENSMUSG00000037492	Zmat4	9630048M01Rik	zinc finger, matrin type 4	protein-coding
common_peak1-18787-33-67--0.75612527872481-1.79658675346641	chr9	107871978	107872922	+	0	NA	intron (NM_011634, intron 12 of 14)	intron (NM_011634, intron 12 of 14)	-5448	NM_023738	74153	Mm.277125	NM_023738	ENSMUSG00000032596	Uba7	1300004C08Rik|Ube1l	ubiquitin-like modifier activating enzyme 7	protein-coding
common_peak2-25664-8-7-0.00522241794757061-1.00793137938329	chr19	10563681	10564101	+	0	NA	Intergenic	Intergenic	-6504	NM_133689	67752	Mm.25939	NM_133689	ENSMUSG00000035179	Ppp1r32	4930579J09Rik|AU015816|IIIG9|IIIG9L|IIIG9S	protein phosphatase 1, regulatory subunit 32	protein-coding
unique_peak1-3859-9-1-2.18961340640422-2.31132995230379	chr2	6478758	6479282	+	0	NA	intron (NM_001110231, intron 13 of 15)	intron (NM_001110231, intron 13 of 15)	205238	NM_181399	98910	Mm.40673	NM_181399	ENSMUSG00000039046	Usp6nl	AI316785|RNTRE|TRE2NL|mKIAA0019	USP6 N-terminal like	protein-coding
common_peak2-25478-27-28-0.133564955767664-0.358978896303361	chr19	4810947	4811666	+	0	NA	exon (NM_019869, exon 1 of 3)	exon (NM_019869, exon 1 of 3)	328	NM_001290127	102902673	Mm.426069	NM_001290127		Rbm14-rbm4	-	Rbm14-Rbm4 readthrough	protein-coding
common_peak2-20273-13-32--1.26592208872068-1.87214134458702	chr1	191025275	191026149	+	0	NA	Intergenic	ORR1E|LTR|MaLR	141520	NM_001159850	16526	Mm.33304	NM_010607	ENSMUSG00000037624	Kcnk2	A430027H14Rik|AI848635|TREK-1	potassium channel, subfamily K, member 2	protein-coding
unique_peak1-3707-13-3-1.77847203063777-2.58603100924543	chr19	44292150	44292765	+	0	NA	intron (NM_024450, intron 2 of 5)	intron (NM_024450, intron 2 of 5)	14679	NM_024450	30049	Mm.480594	NM_024450	ENSMUSG00000025202	Scd3	4930513N16Rik	stearoyl-coenzyme A desaturase 3	protein-coding
common_peak2-23294-9-13--0.617741515653384-0.459837087125828	chr15	31600442	31600972	+	0	NA	Intergenic	MTB_Mm|LTR|MaLR	68836	NM_026546	68073	Mm.119185	NM_026546	ENSMUSG00000039065	Fam173b	A930016P21Rik|AA987072	family with sequence similarity 173, member B	protein-coding
unique_peak1-2457-18-4-1.99099105634099-2.82951996911245	chr15	103244099	103244681	+	0	NA	intron (NM_028797, intron 6 of 8)	L1Md_T|LINE|L1	16468	NM_028797	74174	Mm.325325	NM_028797	ENSMUSG00000022487	Gtsf1	1700006H03Rik|Cue110	gametocyte specific factor 1	protein-coding
unique_peak2-39375-3-8--1.58390809140159-1.39487600375387	chr9	20581216	20581738	+	0	NA	exon (NM_016919, exon 51 of 67)	exon (NM_016919, exon 51 of 67)	38001	NM_016919	53867	Mm.334994	NM_016919	ENSMUSG00000004098	Col5a3	-	collagen, type V, alpha 3	protein-coding
common_peak1-12597-34-34-0.2527855100563-0.484230028934922	chr18	24470384	24471469	+	0	NA	Intergenic	RMER12|LTR|ERVK	106431	NM_001160404	14423	Mm.30249	NM_013814	ENSMUSG00000000420	Galnt1	-	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1	protein-coding
common_peak1-14941-81-93-0.317460751330928-0.897937230793929	chr3	103019578	103021496	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	44903	NM_026602	68183	Mm.104919	NM_026602	ENSMUSG00000005687	Bcas2	6430539P16Rik|AI132645|C76366|C80030	breast carcinoma amplified sequence 2	protein-coding
common_peak2-22983-11-24--1.13516260552311-1.3750876294627	chr14	56034095	56034729	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-63183	NM_001037938	28200	Mm.27427	NM_030686	ENSMUSG00000022210	Dhrs4	AI043103|AI790593|CR|D14Ucla2|NDRD|PHCR|PSCD|RRD|mouNRDR	dehydrogenase/reductase (SDR family) member 4	protein-coding
common_peak2-28166-6-6--0.241956811677302-0.947717972411649	chr4	108328087	108328434	+	0	NA	intron (NM_183300, intron 12 of 15)	Lx3_Mus|LINE|L1	35699	NM_177045	319965	Mm.151129	NM_177045	ENSMUSG00000028582	Cc2d1b	A830039B04Rik|Freud2	coiled-coil and C2 domain containing 1B	protein-coding
unique_peak2-37359-2-7--1.91745425626332-1.45399745587252	chr4	134744741	134745135	+	0	NA	Intergenic	Intergenic	68378	NM_019732	12399	Mm.378894	NM_019732	ENSMUSG00000070691	Runx3	AML2|Cbfa3|Pebp2a3	runt related transcription factor 3	protein-coding
common_peak1-14614-12-12--0.0516637330534535-0.309718203022949	chr3	52104623	52105236	+	0	NA	intron (NM_019739, intron 1 of 2)	intron (NM_019739, intron 1 of 2)	32670	NM_019739	56458	Mm.29891	NM_019739	ENSMUSG00000044167	Foxo1	AI876417|Afxh|FKHR|Fkhr1|Foxo1a	forkhead box O1	protein-coding
common_peak2-25364-9-6-0.382258484346616-1.11707584880836	chr18	82491687	82492104	+	0	NA	Intergenic	Intergenic	84274	NM_008082	14427	Mm.6219	NM_008082	ENSMUSG00000024553	Galr1	Galnr1	galanin receptor 1	protein-coding
common_peak1-14047-15-18--0.235762762887929-0.326591483156968	chr2	119156405	119157226	+	0	NA	exon (NM_019454, exon 8 of 11)	exon (NM_019454, exon 8 of 11)	-4882	NR_030683	100043609	Mm.185068	NR_030683	ENSMUSG00000074912	Gm14207	OTTMUSG00000015946	predicted gene 14207	ncRNA
common_peak2-25484-18-11-0.727956650507195-0.876666802405043	chr19	5015431	5015841	+	0	NA	Intergenic	B1_Mur3|SINE|Alu	-8370	NM_007854	13340	Mm.4930	NM_007854	ENSMUSG00000024891	Slc29a2	Der12|Ent2|Hnp36	solute carrier family 29 (nucleoside transporters), member 2	protein-coding
common_peak2-21181-12-10-0.189344366450341-0.386243247519795	chr11	60045996	60046510	+	0	NA	intron (NM_001039092, intron 12 of 13)	intron (NM_001039092, intron 12 of 13)	-12147	NM_011480	20787	Mm.278701	NM_011480	ENSMUSG00000020538	Srebf1	ADD-1|ADD1|D630008H06|SREBP-1|SREBP-1a|SREBP-1c|SREBP1|SREBP1c|bHLHd1	sterol regulatory element binding transcription factor 1	protein-coding
unique_peak1-1223-15-6-1.20480982849805-1.32521814697968	chr11	108363815	108364490	+	0	NA	intron (NM_029606, intron 10 of 27)	intron (NM_029606, intron 10 of 27)	77572	NM_029606	76380	Mm.344071	NM_029586	ENSMUSG00000020728	Cep112	1700001M19Rik|1700029K01Rik|8430407H02Rik|AV043680|AV207351|Ccdc46|Macoco	centrosomal protein 112	protein-coding
unique_peak1-3164-20-4-2.16614668970383-3.28004177908661	chr18	38209293	38210269	+	0	NA	Intergenic	Intergenic	-51158	NM_001205336	106952	Mm.247642	NM_139206	ENSMUSG00000024451	Arap3	Centd3|Drag1|E030006K04Rik|cnt-d3	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3	protein-coding
common_peak2-28929-85-130--0.0780197534127991-0.331809632856884	chr5	93266084	93268948	+	0	NA	intron (NM_001077595, intron 1 of 9)	intron (NM_001077595, intron 1 of 9)	29108	NM_001077595	27428	Mm.46014	NM_015756	ENSMUSG00000029381	Shroom3	AL022960|D5Ertd287e|Shrm|Shrm3	shroom family member 3	protein-coding
common_peak2-29919-13-22--0.745089925419244-0.690311289528838	chr6	115493588	115494278	+	0	NA	promoter-TSS (NM_199033)	promoter-TSS (NM_199033)	-789	NM_199033	381802	Mm.291208	NM_199033	ENSMUSG00000042389	Tsen2	AU067695	tRNA splicing endonuclease 2 homolog (S. cerevisiae)	protein-coding
common_peak1-18248-32-42--0.147172735482438-0.325162986021101	chr8	33653126	33654252	+	0	NA	Intergenic	Intergenic	391322	NR_046039	666589	Mm.367675	NR_046039		Gm8179	EG666589	predicted gene 8179	ncRNA
common_peak1-7946-158-115-1.17295566934902-13.0838392998395	chr1	153128181	153131731	+	0	NA	Intergenic	Intergenic	-61672	NM_001039512	117198	Mm.33764	NM_028582	ENSMUSG00000023150	Ivns1abp	1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850	influenza virus NS1A binding protein	protein-coding
common_peak2-31102-12-15--0.351224014912361-0.332077462497413	chr8	27128040	27128689	+	0	NA	Intergenic	ORR1B2|LTR|MaLR	-2291	NM_008033	14272	Mm.3496	NM_008033	ENSMUSG00000015994	Fnta	FTA	farnesyltransferase, CAAX box, alpha	protein-coding
common_peak1-8631-13-12-0.0780323124966764-0.334470287753051	chr10	120627584	120628209	+	0	NA	Intergenic	(CAAA)n|Simple_repeat|Simple_repeat	120349	NM_029057	74694	Mm.233833	NM_029057	ENSMUSG00000052302	Tbc1d30	4930505D03Rik	TBC1 domain family, member 30	protein-coding
common_peak1-16461-29-10-1.65285846197781-3.49519823291232	chr5	136533920	136535050	+	0	NA	intron (NM_027158, intron 1 of 5)	B4A|SINE|B4	1348	NM_027158	69665	Mm.75713	NM_027158	ENSMUSG00000006143	Upk3bl	2310043J07Rik	uroplakin 3B-like	protein-coding
common_peak2-21480-17-9-0.896368243317676-1.09394599973099	chr11	88165607	88166209	+	0	NA	promoter-TSS (NR_039545)	promoter-TSS (NR_039545)	-367	NR_039545	100628571		NR_039545	miRBase:MI0016973	Mir378b	mmu-mir-378b	microRNA 378b	ncRNA
common_peak2-30694-20-18-0.240147271147608-0.388034239052786	chr7	110648294	110649106	+	0	NA	Intergenic	(CAAA)n|Simple_repeat|Simple_repeat	6758	NM_147081	259085	Mm.377830	NM_147081	ENSMUSG00000045584	Olfr610	MOR9-2	olfactory receptor 610	protein-coding
unique_peak2-37905-4-7--1.02346051385325-1.09384600808989	chr5	143047750	143048165	+	0	NA	intron (NM_175217, intron 4 of 6)	intron (NM_175217, intron 4 of 6)	-20905	NM_001289588	231858	Mm.33766	NM_178702	ENSMUSG00000029576	Radil	AI536456|D930005D10Rik	Ras association and DIL domains	protein-coding
common_peak2-22498-3-5--0.998945590680433-0.96108193396963	chr13	51885823	51886105	+	0	NA	intron (NM_001281880, intron 1 of 16)	intron (NM_001281880, intron 1 of 16)	3152	NM_001281880	20354	Mm.33903	NM_013660	ENSMUSG00000021451	Sema4d	CD100|Semacl2|Semaj|Semcl2|coll-4	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D	protein-coding
unique_peak2-34484-9-13--0.617741515653384-0.459837087125828	chr14	40956032	40956767	+	0	NA	Intergenic	Lx|LINE|L1	487448	NR_045936	73591	Mm.65499	NR_045936		1700109I08Rik	-	RIKEN cDNA 1700109I08 gene	ncRNA
unique_peak2-34130-2-13--2.72480917832092-2.79529063155376	chr13	22035728	22036270	+	0	NA	promoter-TSS (NM_183014)	promoter-TSS (NM_183014)	-964	NM_183014	193452	Mm.187446	NM_183014	ENSMUSG00000006720	Zfp184	4930500C15Rik	zinc finger protein 184 (Kruppel-like)	protein-coding
common_peak2-24440-13-13--0.0288828914198356-0.309074325783021	chr17	21650600	21651228	+	0	NA	Intergenic	Lx9|LINE|L1	-21589	NM_144515	22710	Mm.296100	NM_144515		Zfp52	KRAB11|Zfp-52|Zfp76|mszf23-2|mszf24|mszf34|mszf75|zfec29	zinc finger protein 52	protein-coding
unique_peak1-7098-9-3-1.18961340640422-1.57096726280955	chr9	41491172	41491656	+	0	NA	Intergenic	Intergenic	101405	NR_029822	387236		NR_029822	miRBase:MI0000725	Mir125b-1	Mirn125b|Mirn125b-1	microRNA 125b-1	ncRNA
common_peak2-20325-7-10--0.660340788339108-1.12966497611638	chr10	93421506	93422199	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	4756	NR_029764	723908		NR_029764	miRBase:MI0000609	Mir331	Mirn331|mmu-mir-331	microRNA 331	ncRNA
common_peak2-24496-31-44--0.266614425516551-0.432554671146866	chr17	25752632	25754423	+	0	NA	intron (NM_029624, intron 4 of 10)	B1_Mur2|SINE|Alu	37408	NR_045520	76483	Mm.12787	NM_029624	ENSMUSG00000002279	Lmf1	2400010G15Rik|AW822050|Tmem112|cld	lipase maturation factor 1	protein-coding
common_peak1-14784-8-12--0.695217300193522-0.475924844171029	chr3	89392139	89392655	+	0	NA	intron (NM_080466, intron 2 of 7)	intron (NM_080466, intron 2 of 7)	68311	NM_080466	140493	Mm.120250	NM_080466		Kcnn3	KCa2.3|SK3|SKCA3	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	protein-coding
common_peak2-19682-8-7-0.00522241794757061-1.00793137938329	chr1	58445267	58445696	+	0	NA	Intergenic	RSINE1|SINE|B4	-4499	NM_025824	66882	Mm.21848	NM_025824	ENSMUSG00000051223	Bzw1	1200015E15Rik|mKIAA0005	basic leucine zipper and W2 domains 1	protein-coding
common_peak2-25050-35-79--0.890557836424859-2.64247392621752	chr18	32162942	32164033	+	0	NA	intron (NM_032394, intron 8 of 46)	intron (NM_032394, intron 8 of 46)	33098	NM_032394	17922	Mm.440013	NM_032394	ENSMUSG00000024388	Myo7b	-	myosin VIIB	protein-coding
unique_peak2-35712-6-4-0.24347001549294-0.989110657569874	chr18	33292804	33293177	+	0	NA	intron (NM_009793, intron 5 of 10)	B3|SINE|B2	80480	NM_133774	170459	Mm.127058	NM_133774		Stard4	4632419C16Rik|9030213J02Rik|AA517649|AW324468	StAR-related lipid transfer (START) domain containing 4	protein-coding
common_peak1-9025-92-61-1.13815577331589-6.6605040616408	chr11	61663840	61665988	+	0	NA	intron (NM_013881, intron 2 of 26)	B3|SINE|B2	3680	NM_013881	29869	Mm.162025	NM_013881	ENSMUSG00000004798	Ulk2	A830085I22Rik|AU015340|Unc51.2|mKIAA0623	unc-51 like kinase 2	protein-coding
unique_peak1-2154-10-5-0.771452844287613-1.33892459842472	chr15	59168197	59168990	+	0	NA	intron (NM_153548, intron 26 of 28)	intron (NM_153548, intron 26 of 28)	21946	NM_009270	20775	Mm.296169	NM_009270	ENSMUSG00000022351	Sqle	AI323792	squalene epoxidase	protein-coding
common_peak1-17009-21-24--0.0743669245084888-0.301029995663979	chr6	89643705	89644607	+	0	NA	Intergenic	L1Md_A|LINE|L1	-20041	NM_053228	113855	Mm.377152	NM_053228	ENSMUSG00000096051	Vmn1r40	V1rb7	vomeronasal 1 receptor 40	protein-coding
common_peak2-20103-14-16--0.188246680892695-0.308035960714963	chr1	160044225	160044877	+	0	NA	Intergenic	RMER1A|Other|Other	241840	NM_207583	240843	Mm.329579	NM_207583	ENSMUSG00000004031	Brinp2	6430517E21Rik|BB361039|Fam5b|mKIAA1747	bone morphogenic protein/retinoic acid inducible neural-specific 2	protein-coding
common_peak2-20519-16-10-0.658832023630764-0.699649909729472	chr10	61089326	61089800	+	0	NA	TTS (NM_001177511)	TTS (NM_001177511)	-21806	NM_026438	67895	Mm.28897	NM_026438	ENSMUSG00000020089	Ppa1	2010317E03Rik|Pyp	pyrophosphatase (inorganic) 1	protein-coding
common_peak1-19364-19-22--0.120874629395327-0.306080386793804	chrX	13845834	13846762	+	0	NA	Intergenic	LTR16C|LTR|ERVL	58024	NM_001034100	385328	Mm.275681	NM_001034100	ENSMUSG00000061065	Gm5382	EG385328	predicted gene 5382	protein-coding
common_peak2-29682-5-7--0.704380336005853-1.01466476204226	chr6	72528243	72528657	+	0	NA	intron (NM_001253692, intron 6 of 11)	RSINE1|SINE|B4	19957	NM_144917	232089	Mm.167232	NM_144917	ENSMUSG00000056698	Elmod3	AI844780|C330008I15Rik|RBM29|Rbed1	ELMO/CED-12 domain containing 3	protein-coding
common_peak1-7992-12-17--0.521149016354673-0.417187467413082	chr1	162225853	162226581	+	0	NA	intron (NM_001038621, intron 2 of 8)	intron (NM_001038621, intron 2 of 8)	55485	NM_001038621	29809	Mm.25833	NM_013862	ENSMUSG00000026721	Rabgap1l	5830411O09Rik|8430421H08Rik|9630005B12Rik|AW049894|HHL|Hh1|mKIAA0471	RAB GTPase activating protein 1-like	protein-coding
unique_peak2-38590-2-6--1.72480917832092-1.26211192963361	chr7	72672750	72673078	+	0	NA	Intergenic	Intergenic	-116870	NM_172310	272396	Mm.35127	NM_172310	ENSMUSG00000030515	Tarsl2	A530046H20Rik	threonyl-tRNA synthetase-like 2	protein-coding
common_peak2-24462-14-19--0.422711934529718-0.403453972741636	chr17	23998236	23999119	+	0	NA	Intergenic	Intergenic	-6362	NM_020487	57256	Mm.386785	NM_020487	ENSMUSG00000024116	Prss21	1700023E12Rik|TESP5|mT4|testisin	protease, serine 21	protein-coding
common_peak1-12026-29-30-0.158093770228236-0.384630725886669	chr17	17063838	17064830	+	0	NA	Intergenic	Intergenic	-136733	NM_001005358	449000	Mm.483718	NM_001005358	ENSMUSG00000096696	Zfp960	-	zinc finger protein 960	protein-coding
common_peak1-11982-95-210--0.573183843683172-3.17156772160025	chr17	10317944	10320549	+	0	NA	Intergenic	Intergenic	192980	NM_021881	19317	Mm.130694	NM_021881	ENSMUSG00000062078	Qk	1110003F05Rik|1500005P18|QkI|l(17)-1Wis|l17Wis1	quaking	protein-coding
common_peak1-9010-21-22-0.0459273092092225-0.319918318021793	chr11	60537951	60538780	+	0	NA	intron (NM_022009, intron 2 of 29)	intron (NM_022009, intron 2 of 29)	2358	NM_022009	14248	Mm.339755	NM_022009	ENSMUSG00000002812	Flii	3632430F08Rik|Fli1|Fliih	flightless I homolog (Drosophila)	protein-coding
common_peak1-17991-10-10--0.103016273628528-0.301029995663987	chr7	139248886	139249545	+	0	NA	intron (NM_018867, intron 10 of 13)	intron (NM_018867, intron 10 of 13)	91072	NM_173410	233919	Mm.208740	NM_173410		Gpr26	9630036A11Rik|A730021D22	G protein-coupled receptor 26	protein-coding
common_peak2-23808-11-8-0.338768582809301-1.14218153353838	chr15	100495261	100495567	+	0	NA	intron (NM_001270537, intron 1 of 10)	intron (NM_001270537, intron 1 of 10)	4517	NM_001270537	668218	Mm.451225	NM_001270537	ENSMUSG00000098112	Bin2	-	bridging integrator 2	protein-coding
common_peak2-20581-9-13--0.617741515653384-0.459837087125828	chr10	77605608	77606107	+	0	NA	Intergenic	ORR1A2|LTR|MaLR	26656	NM_138601	28295	Mm.268691	NM_138601	ENSMUSG00000053329	D10Jhu81e	C21orf33|ES1	DNA segment, Chr 10, Johns Hopkins University 81 expressed	protein-coding
common_peak2-27785-52-95--0.476702510455457-1.19988796804558	chr3	136669020	136671339	+	0	NA	Intergenic	Intergenic	-333863	NM_001163522	59308	Mm.27343	NM_016885	ENSMUSG00000054690	Emcn	0610012K22Rik|AI315669|Muc14	endomucin	protein-coding
unique_peak1-3012-7-3-0.799090830298189-1.23214870625617	chr17	85090740	85091211	+	0	NA	intron (NM_026180, intron 3 of 12)	intron (NM_026180, intron 3 of 12)	8514	NM_026180	67470	Mm.26581	NM_026180	ENSMUSG00000024254	Abcg8	1300003C16Rik|AI114946|sterolin-2	ATP-binding cassette, sub-family G (WHITE), member 8	protein-coding
common_peak1-8504-11-18--0.739233929191972-0.671582559449692	chr10	82178351	82178971	+	0	NA	intron (NM_001081218, intron 7 of 14)	Lx|LINE|L1	16909	NM_001081218	67933	Mm.127405	NM_026462		Hcfc2	1700129L13Rik|AU019838	host cell factor C2	protein-coding
unique_peak2-39160-5-9--1.02630843089322-1.21398586181642	chr8	91441718	91442219	+	0	NA	Intergenic	MER121|Unknown|Unknown	-106666	NR_106190	102465899		NR_106190	miRBase:MI0026042	Mir8110	mmu-mir-8110	microRNA mir-8110	ncRNA
common_peak2-31988-13-7-0.778472030637769-0.817533494790411	chr9	70241852	70242285	+	0	NA	intron (NM_181072, intron 26 of 27)	intron (NM_181072, intron 26 of 27)	11492	NR_049200	100885839		NR_049200	miRBase:MI0019195	Mir5626	mmu-mir-5626	microRNA mir-5626	ncRNA
common_peak1-11431-12-4-1.32684789020028-2.04196296489515	chr15	99846776	99847299	+	0	NA	TTS (NM_001024526)	TTS (NM_001024526)	-22058	NM_001159361	239667	Mm.243658	NM_172819	ENSMUSG00000023026	Dip2b	4932422C22|AI317237|AI854602|mKIAA1463	DIP2 disco-interacting protein 2 homolog B (Drosophila)	protein-coding
unique_peak1-5298-7-0-2.79909083029819-2.40823996531185	chr5	73498744	73499119	+	0	NA	intron (NM_028194, intron 18 of 62)	L1_Mus2|LINE|L1	100788	NM_173403	231290	Mm.491387	NM_173403		Slc10a4	E130304D01	solute carrier family 10 (sodium/bile acid cotransporter family), member 4	protein-coding
common_peak1-16099-19-23--0.18227517405947-0.320777457303847	chr5	64861140	64862021	+	0	NA	Intergenic	B3A|SINE|B2	-2399	NR_040681	69999	Mm.261413	NR_040681		1700027F09Rik	-	RIKEN cDNA 1700027F09 gene	ncRNA
common_peak2-29967-12-7-0.648775985087639-0.697979855752659	chr6	119381348	119381886	+	0	NA	TTS (NM_001271757)	TTS (NM_001271757)	-14116	NM_197985	68465	Mm.291826	NM_197985	ENSMUSG00000030168	Adipor2	1110001I14Rik|ADCR2|AI115388|AW554121|D6Ucla1e|Paqr2	adiponectin receptor 2	protein-coding
common_peak1-8328-24-31--0.206790097232283-0.334168439396943	chr10	43901235	43902192	+	0	NA	intron (NR_001582, intron 2 of 6)	intron (NR_001582, intron 2 of 6)	11460	NR_001582	70365	Mm.87073	NR_001582		Speer5-ps1	1700007C10Rik|SPEER-5|Speer5-ps	spermatogenesis associated glutamate (E)-rich protein 5, pseudogene 1	pseudo
unique_peak2-35137-7-7--0.200909169701811-0.97990265578305	chr16	30603360	30603814	+	0	NA	TTS (NM_177632)	TTS (NM_177632)	3778	NM_177632	224093	Mm.28244	NM_177632	ENSMUSG00000046546	Fam43a	Tuf1	family with sequence similarity 43, member A	protein-coding
common_peak1-16867-16-22--0.405298313788951-0.440610794044987	chr6	57691396	57692078	+	0	NA	Intergenic	L1Md_F2|LINE|L1	39288	NM_133737	71835	Mm.274904	NM_133737		Lancl2	1700003F10Rik	LanC (bacterial lantibiotic synthetase component C)-like 2	protein-coding
common_peak1-9412-53-60-0.210235674853042-0.501837478813393	chr11	101008330	101010010	+	0	NA	Intergenic	RSINE1|SINE|B4	-8028	NM_134028	103768	Mm.142348	NM_134028	ENSMUSG00000045007	Tubg2	AI504772|Tubgl	tubulin, gamma 2	protein-coding
common_peak1-11711-29-30-0.158093770228236-0.384630725886669	chr16	32277304	32278066	+	0	NA	5' UTR (NM_027355, exon 1 of 6)	5' UTR (NM_027355, exon 1 of 6)	138	NM_027355	70238	Mm.228263	NM_027355	ENSMUSG00000014074	Rnf168	3110001H15Rik	ring finger protein 168	protein-coding
common_peak2-30024-8-8--0.164702583494742-1.00793137938329	chr6	125324646	125325096	+	0	NA	intron (NM_198604, intron 7 of 16)	intron (NM_198604, intron 7 of 16)	5651	NM_198604	213522	Mm.333396	NM_198604	ENSMUSG00000038167	Plekhg6	BC026778|Gm155	pleckstrin homology domain containing, family G (with RhoGef domain) member 6	protein-coding
unique_peak2-37143-4-5--0.608423014574403-0.909929411522249	chr4	28987847	28988165	+	0	NA	Intergenic	MLT1B|LTR|MaLR	247711	NM_001122889	13841	Mm.257266	NM_010141	ENSMUSG00000028289	Epha7	Cek11|Ebk|Ehk3|Hek11|Mdk1	Eph receptor A7	protein-coding
common_peak2-29758-16-17--0.0516613591742505-0.301029995663984	chr6	86848475	86849057	+	0	NA	intron (NM_001040106, intron 1 of 20)	intron (NM_001040106, intron 1 of 20)	49255	NM_001040106	269774	Mm.221038	NM_177762	ENSMUSG00000057230	Aak1	5530400K14Rik|9630042K20|AU067724|AU067726|BC028270|C79663|D6Ertd245e|R75501|mKIAA1048	AP2 associated kinase 1	protein-coding
common_peak1-14335-14-11-0.314253659636488-0.435191258261915	chr2	164460902	164461542	+	0	NA	intron (NM_001012723, intron 3 of 3)	intron (NM_001012723, intron 3 of 3)	3080	NM_001012723	277345	Mm.247244	NM_001012723	ENSMUSG00000070530	Wfdc16	BC043944|WAP16	WAP four-disulfide core domain 16	protein-coding
unique_peak1-4746-9-3-1.18961340640422-1.57096726280955	chr3	109157240	109157816	+	0	NA	intron (NM_020505, intron 1 of 26)	MT2_Mm|LTR|ERVL	13927	NM_020505	57257	Mm.282257	NM_020505	ENSMUSG00000033721	Vav3	A530094I06Rik|AA986410|Idd18.1	vav 3 oncogene	protein-coding
common_peak1-16195-41-48-0.0864388607334519-0.335782825099843	chr5	92504575	92506217	+	0	NA	intron (NM_011816, intron 1 of 11)	B3|SINE|B2	6547	NM_001080797	23881	Mm.290530	NM_011816	ENSMUSG00000029405	G3bp2	AA409541|E430034L04Rik|G3BP|mKIAA0660	GTPase activating protein (SH3 domain) binding protein 2	protein-coding
common_peak2-22115-11-6-0.701338662194009-1.32595962126035	chr12	83528163	83528547	+	0	NA	intron (NM_172579, intron 14 of 20)	intron (NM_172579, intron 14 of 20)	116019	NM_172579	217692	Mm.261333	NM_172579	ENSMUSG00000042700	Sipa1l1	4931426N11Rik|AW213287|Spar|mKIAA0440	signal-induced proliferation-associated 1 like 1	protein-coding
unique_peak2-39436-2-10--2.37688587490062-2.09384600808989	chr9	45087685	45088165	+	0	NA	Intergenic	Intergenic	-10696	NM_008348	16154	Mm.379327	NM_008348	ENSMUSG00000032089	Il10ra	AW553859|CDw210|CDw210a|Il10r|mIL-10R	interleukin 10 receptor, alpha	protein-coding
unique_peak2-32888-0-6--3.64748585253182-1.56314192529759	chr10	12963949	12964418	+	0	NA	intron (NM_001033257, intron 7 of 11)	intron (NM_001033257, intron 7 of 11)	-51240	NM_181470	353258	Mm.117581	NM_181470	ENSMUSG00000019814	Ltv1	2610020N02Rik	LTV1 homolog (S. cerevisiae)	protein-coding
common_peak1-11987-12-12--0.0516637330534535-0.309718203022949	chr17	12119391	12119958	+	0	NA	intron (NM_016694, intron 9 of 11)	intron (NM_016694, intron 9 of 11)	-43619	NR_045808	52027	Mm.442257	NR_045808		D17Ertd648e	-	DNA segment, Chr 17, ERATO Doi 648, expressed	ncRNA
common_peak2-19722-28-42--0.373305634880635-0.53611512876719	chr1	71556745	71557809	+	0	NA	Intergenic	MLT1D|LTR|MaLR	-46453	NM_026195	108147	Mm.38010	NM_026195	ENSMUSG00000026192	Atic	2610509C24Rik|AA536954|AW212393	5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase	protein-coding
unique_peak1-712-7-1-1.79909083029819-1.80617997398389	chr10	86315338	86315753	+	0	NA	intron (NM_138673, intron 61 of 68)	intron (NM_138673, intron 61 of 68)	73795	NM_175331	103466	Mm.200446	NM_175331	ENSMUSG00000054027	Nt5dc3	AU040402|AW540062|C630002B14Rik|TU12B1-TY	5'-nucleotidase domain containing 3	protein-coding
common_peak2-30368-9-7-0.18961340640422-1.05908390183068	chr7	28577521	28577932	+	0	NA	Intergenic	Intergenic	27034	NR_033484	100043229	Mm.458666	NR_033484		Gm10046	ENSMUSG00000058661	predicted gene 10046	ncRNA
unique_peak1-1953-25-8-1.69192490390279-3.04993787975775	chr14	101829770	101830828	+	0	NA	Intergenic	LTR41|LTR|ERVL	178109	NM_001081278	210789	Mm.320639	NM_173380	ENSMUSG00000033083	Tbc1d4	5930406J04Rik|A930035N22|AV295684|As160	TBC1 domain family, member 4	protein-coding
unique_peak2-38521-5-6--0.511735258063458-0.947717972411649	chr7	45653188	45653596	+	0	NA	Intergenic	Intergenic	866512	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak2-23231-77-120--0.134336657718597-0.395471607452959	chr15	6707344	6709123	+	0	NA	intron (NM_030168, intron 7 of 37)	intron (NM_030168, intron 7 of 37)	49852	NM_030168	78757	Mm.275811	NM_030168	ENSMUSG00000050310	Rictor	4921505C17Rik|6030405M08Rik|AVO3|AW492497|D530039E11Rik	RPTOR independent companion of MTOR, complex 2	protein-coding
common_peak2-28941-26-27-0.120544170100858-0.335332249061431	chr5	98944029	98944985	+	0	NA	intron (NM_001024614, intron 3 of 5)	intron (NM_001024614, intron 3 of 5)	-39824	NR_030484	735265		NR_030484		Mir703	Mirn703|mmu-mir-703	microRNA 703	ncRNA
common_peak1-10913-38-44-0.0795995629688555-0.338806640379593	chr15	5185423	5186345	+	0	NA	intron (NM_008965, intron 2 of 2)	intron (NM_008965, intron 2 of 2)	8303	NM_001136079	19219	Mm.18509	NM_008965	ENSMUSG00000039942	Ptger4	EP4|Ptgerep4	prostaglandin E receptor 4 (subtype EP4)	protein-coding
common_peak2-26751-26-12-1.22745937401737-2.03163221100073	chr2	136679569	136680128	+	0	NA	Intergenic	Intergenic	-37106	NM_028201	74243	Mm.330612	NM_028201	ENSMUSG00000027281	Slx4ip	2210009G21Rik|2410004I22Rik|C85661|Slxip	SLX4 interacting protein	protein-coding
unique_peak1-6464-8-0-3.00522241794757-2.70926996097583	chr7	103929951	103930472	+	0	NA	intron (NM_011858, intron 14 of 32)	intron (NM_011858, intron 14 of 32)	19848	NR_045874	791381	Mm.402112	NR_045874	ENSMUSG00000053049	Gm15413	ENSMUSG00000053049|OTTMUSG00000021246	predicted gene 15413	ncRNA
unique_peak2-36272-1-14--3.53394760582526-3.64038867156802	chr2	60402689	60402908	+	0	NA	Intergenic	IAP-d-int|LTR|ERVK	-11433	NM_008867	18779	Mm.5092	NM_008867	ENSMUSG00000054580	Pla2r1	Pla2-r|Pla2g1br|Pla2r	phospholipase A2 receptor 1	protein-coding
common_peak2-22367-24-42--0.633054851934381-0.913161965438649	chr13	28957928	28959157	+	0	NA	intron (NR_045053, intron 2 of 8)	intron (NR_045053, intron 2 of 8)	18749	NR_045054	72518	Mm.37454	NR_045053		2610307P16Rik	AI666457	RIKEN cDNA 2610307P16 gene	ncRNA
common_peak2-25606-10-12--0.344024373132323-0.340565874754526	chr19	8898107	8898576	+	0	NA	intron (NM_001081196, intron 4 of 13)	B1_Mus2|SINE|Alu	4450	NM_001081196	68693	Mm.476519	NM_001081196	ENSMUSG00000071659	Hnrnpul2	1110031M08Rik|AI465155|Hnrpul2	heterogeneous nuclear ribonucleoprotein U-like 2	protein-coding
common_peak2-22329-17-23--0.366666162516118-0.383878263347744	chr13	23544496	23545253	+	0	NA	Intergenic	Intergenic	12896	NM_013483	12231	Mm.1420	NM_013483	ENSMUSG00000000706	Btn1a1	Btn	butyrophilin, subfamily 1, member A1	protein-coding
common_peak1-8731-23-35--0.448157496933232-0.590428395010947	chr11	3265776	3266873	+	0	NA	intron (NM_010718, intron 2 of 15)	L2c|LINE|L2	5071	NM_173053	16886	Mm.124176	NM_010718	ENSMUSG00000020451	Limk2	Limk-2	LIM motif-containing protein kinase 2	protein-coding
unique_peak2-35766-7-6--0.00826409175941478-0.97990265578305	chr18	42744107	42744539	+	0	NA	Intergenic	Intergenic	-5017	NM_181543	240239	Mm.186779	NM_181543	ENSMUSG00000042816	Gpr151	C130082O03Rik|GalRL|PGR7|nGPCR-2037	G protein-coupled receptor 151	protein-coding
common_peak1-7597-14-8-0.729291158915332-0.771068449301682	chr1	58028674	58029408	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-2113	NM_001159865	51960	Mm.339711	NM_030211	ENSMUSG00000054770	Kctd18	4932411A20Rik|6530404F10Rik	potassium channel tetramerisation domain containing 18	protein-coding
common_peak2-21647-12-11-0.0638134843664826-0.337263207250336	chr11	102155840	102156318	+	0	NA	intron (NM_001098837, intron 2 of 12)	intron (NM_001098837, intron 2 of 12)	1864	NM_001098836	217218	Mm.390381	NM_001098836	ENSMUSG00000059995	Atxn7l3	E030022H21Rik	ataxin 7-like 3	protein-coding
common_peak2-30388-26-17-0.75797409071615-1.09210977391291	chr7	30094736	30095653	+	0	NA	intron (NM_013874, intron 3 of 11)	URR1A|DNA|MER1_type	6170	NM_013874	29861	Mm.101885	NM_013874	ENSMUSG00000030584	Dpf1	Neud4	D4, zinc and double PHD fingers family 1	protein-coding
common_peak2-24065-16-22--0.405298313788951-0.440610794044987	chr16	30187375	30188361	+	0	NA	Intergenic	Intergenic	79750	NM_027904	71756	Mm.290614	NM_027904	ENSMUSG00000023176	Cpn2	1300018K11Rik	carboxypeptidase N, polypeptide 2	protein-coding
common_peak1-16502-22-19-0.325356010200042-0.479250674391597	chr5	139378776	139379717	+	0	NA	Intergenic	B4A|SINE|B4	83212	NM_001195128	384244	Mm.485002	NM_001195128	ENSMUSG00000094504	Gm5294	EG384244	predicted gene 5294	protein-coding
unique_peak2-36124-4-6--0.830815435910851-0.989110657569874	chr2	5787084	5787506	+	0	NA	intron (NM_016918, intron 7 of 8)	intron (NM_016918, intron 7 of 8)	21215	NM_016918	53893	Mm.251904	NM_016918	ENSMUSG00000025817	Nudt5	-	nudix (nucleoside diphosphate linked moiety X)-type motif 5	protein-coding
unique_peak1-3466-8-0-3.00522241794757-2.70926996097583	chr19	9984464	9985015	+	0	NA	Intergenic	LTRIS_Mus|LTR|ERV1	-10716	NM_016692	16319	Mm.29755	NM_016692	ENSMUSG00000024660	Incenp	2700067E22Rik|AU019509|C130081E20|C77457	inner centromere protein	protein-coding
common_peak1-14489-53-66-0.0748838219581565-0.340664206019335	chr3	9003752	9004923	+	0	NA	intron (NM_009412, intron 1 of 5)	CpG	178	NM_009412	21985	Mm.371590	NM_009412	ENSMUSG00000027506	Tpd52	AI043038|mD52	tumor protein D52	protein-coding
common_peak1-19404-9-21--1.26981821223308-1.37307999835977	chrX	71556551	71557076	+	0	NA	3' UTR (NM_010273, exon 11 of 11)	3' UTR (NM_010273, exon 11 of 11)	-1559	NM_138607	108160	Mm.4370	NM_138607	ENSMUSG00000001962	Fam50a	D0HXS9928E|XAP-5	family with sequence similarity 50, member A	protein-coding
common_peak1-8191-69-72-0.405317888378715-1.10704415004305	chr10	111574848	111577107	+	0	NA	Intergenic	RLTR46|LTR|ERVK	-26755	NM_178278	353025	Mm.194428	NM_178278	ENSMUSG00000035694	Caps2	D630005B03Rik	calcyphosphine 2	protein-coding
unique_peak2-34361-8-10--0.454209200689727-1.078512453669	chr13	104285666	104286293	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-161407	NM_175171	328329	Mm.202606	NM_175171	ENSMUSG00000034751	Mast4	4930420O11Rik|AI642422|mKIAA0303	microtubule associated serine/threonine kinase family member 4	protein-coding
common_peak2-21122-23-44--0.770085591820594-1.3174917037782	chr11	53762790	53764219	+	0	NA	TTS (NM_019723)	TTS (NM_019723)	30025	NM_019723	56517	Mm.154284	NM_019723	ENSMUSG00000063652	Slc22a21	Octn3|Slc22a9	solute carrier family 22 (organic cation transporter), member 21	protein-coding
unique_peak2-38122-4-15--2.02346051385325-2.4322161449009	chr6	83032955	83033682	+	0	NA	Intergenic	Intergenic	-3041	NM_010692	16815	Mm.20359	NM_010692	ENSMUSG00000034968	Lbx2	Lbx2h	ladybird homeobox homolog 2 (Drosophila)	protein-coding
unique_peak1-6036-14-6-1.09186123830004-1.16633110333236	chr6	115232112	115232673	+	0	NA	3' UTR (NM_001111015, exon 13 of 13)	3' UTR (NM_001111015, exon 13 of 13)	-30525	NM_080639	110595	Mm.255607	NM_080639	ENSMUSG00000030317	Timp4	TIMP-4	tissue inhibitor of metalloproteinase 4	protein-coding
common_peak1-7963-41-37-0.453221191405075-0.852626677849445	chr1	155557721	155558995	+	0	NA	Intergenic	Intergenic	26601	NR_046171	329271	Mm.384841	NR_046171		C230024C17Rik	C230024C17	RIKEN cDNA C230024C17 gene	ncRNA
common_peak1-10732-13-19--0.543456064249594-0.466170754204149	chr14	65261889	65262491	+	0	NA	Intergenic	Intergenic	-9178	NM_001081177	16554	Mm.23611	NM_001081177	ENSMUSG00000060012	Kif13b	5330429L19Rik|6030414C01|AI429803|C130021D12Rik|GAKIN	kinesin family member 13B	protein-coding
common_peak2-31111-34-46--0.172520324676372-0.340524918943711	chr8	33384947	33386424	+	0	NA	Intergenic	L1MD2|LINE|L1	123318	NR_046039	666589	Mm.367675	NR_046039		Gm8179	EG666589	predicted gene 8179	ncRNA
unique_peak1-1964-14-4-1.57728806547028-2.4322161449009	chr14	105804865	105805586	+	0	NA	Intergenic	Lx6|LINE|L1	-21551	NR_045859	71362	Mm.410781	NR_045859		5430440P10Rik	-	RIKEN cDNA 5430440P10 gene	ncRNA
common_peak2-19671-90-117-0.17166197658031-0.523540816573272	chr1	55051960	55053696	+	0	NA	intron (NM_031179, intron 20 of 24)	intron (NM_031179, intron 20 of 24)	31494	NM_031179	81898	Mm.279736	NM_031179	ENSMUSG00000025982	Sf3b1	155kDa|2810001M05Rik|AA409119|Prp10|SAP155|SF3b155|TA-8|Targ4	splicing factor 3b, subunit 1	protein-coding
common_peak1-11333-17-22--0.305265617851975-0.348739088570342	chr15	85971196	85971950	+	0	NA	3' UTR (NM_145475, exon 13 of 13)	3' UTR (NM_145475, exon 13 of 13)	44998	NM_145475	223753	Mm.222685	NM_145475	ENSMUSG00000035891	Cerk	AI848610|D330016D08Rik|mKIAA1646	ceramide kinase	protein-coding
common_peak1-17132-11-4-1.18676548936425-1.68134727924692	chr6	115522699	115523225	+	0	NA	intron (NM_199033, intron 8 of 11)	intron (NM_199033, intron 8 of 11)	19632	NM_001101431	70291	Mm.133694	NM_001101431		Mkrn2os	2510049J12Rik	makorin, ring finger protein 2, opposite strand	protein-coding
unique_peak1-1117-7-1-1.79909083029819-1.80617997398389	chr11	94406268	94406697	+	0	NA	intron (NM_001013381, intron 3 of 8)	intron (NM_001013381, intron 3 of 8)	4039	NM_001013381	237926	Mm.342275	NM_001013381	ENSMUSG00000039096	Rsad1	B430319G23|BC056485	radical S-adenosyl methionine domain containing 1	protein-coding
common_peak1-18624-48-70--0.178819968269868-0.381068586924698	chr8	109736777	109738125	+	0	NA	Intergenic	MERVK26-int|LTR|ERVK	62890	NM_025558	66427	Mm.20242	NM_025558	ENSMUSG00000031924	Cyb5b	1810044O22Rik|AU015618|Cyb5m	cytochrome b5 type B	protein-coding
common_peak1-14017-19-25--0.297752391479405-0.376654945067947	chr2	112265434	112266125	+	0	NA	Intergenic	Lx5|LINE|L1	-29403	NM_133749	73024	Mm.268027	NM_133749		Emc7	2900064A13Rik|AI451465|ORF3|c11orf3	ER membrane protein complex subunit 7	protein-coding
common_peak1-18493-28-26-0.298071617657994-0.481798116163919	chr8	85080040	85081163	+	0	NA	Intergenic	Intergenic	-154116	NM_008357	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak1-9945-22-47--0.937678395633752-1.78434948019896	chr12	110695546	110696458	+	0	NA	intron (NR_033813, intron 4 of 5)	intron (NR_033813, intron 4 of 5)	4337	NM_010052	13386	Mm.157069	NM_010052	ENSMUSG00000040856	Dlk1	AW742678|DLK-1|DlkI|FA1|Ly107|Peg9|SCP1|ZOG|pG2|pref-1	delta-like 1 homolog (Drosophila)	protein-coding
common_peak1-13447-15-19--0.309763344331706-0.356936432242222	chr19	56397093	56397716	+	0	NA	intron (NM_198059, intron 38 of 40)	intron (NM_198059, intron 38 of 40)	34976	NM_146101	226243	Mm.25791	NM_146101	ENSMUSG00000025075	Habp2	AI035669|FSAP|HABP|HGFAL|PHBP	hyaluronic acid binding protein 2	protein-coding
common_peak2-23898-8-6-0.197867495889966-1.03789460276074	chr16	4406009	4406445	+	0	NA	intron (NM_001291910, intron 3 of 11)	intron (NM_001291910, intron 3 of 11)	14271	NM_001291910	11515	Mm.439750	NM_009624	ENSMUSG00000005580	Adcy9	ACtp10|AW125421|D16Wsu65e|mKIAA0520	adenylate cyclase 9	protein-coding
common_peak2-25828-14-16--0.188246680892695-0.308035960714963	chr19	38709749	38710576	+	0	NA	intron (NM_019588, intron 2 of 31)	intron (NM_019588, intron 2 of 31)	111475	NM_019588	74055	Mm.34031	NM_019588	ENSMUSG00000024998	Plce1	4933403A21Rik|PLCepsilon|Plce|mKIAA1516	phospholipase C, epsilon 1	protein-coding
common_peak1-7884-79-63-0.82883516717662-3.5376787500824	chr1	134097498	134099942	+	0	NA	intron (NM_001033250, intron 1 of 3)	intron (NM_001033250, intron 1 of 3)	4055	NR_029777	723818		NR_029777	miRBase:MI0000646	Mir135b	Mirn135b	microRNA 135b	ncRNA
common_peak1-12226-7-12--0.901348887842903-1.31827279259406	chr17	34959377	34959903	+	0	NA	intron (NM_011413, intron 2 of 40)	intron (NM_011413, intron 2 of 40)	759	NM_011413	625018	Mm.439678	NM_011413		C4a	Slp	complement component 4A (Rodgers blood group)	protein-coding
common_peak1-13453-146-135-0.806140984195367-6.55819863996417	chr19	57609575	57612059	+	0	NA	Intergenic	Intergenic	27261	NR_040307	78073	Mm.12411	NR_040306		6720468P15Rik	-	RIKEN cDNA 6720468P15 gene	ncRNA
unique_peak2-38419-7-13--1.00826409175941-0.697979855752659	chr7	24972102	24972625	+	0	NA	Intergenic	RLTR12B|LTR|ERVK	12299	NM_001029933	232966	Mm.435485	NM_001029933		Zfp114	Gm1957|Zfp110	zinc finger protein 114	protein-coding
unique_peak2-36366-3-6--1.22133801201688-1.08602067057793	chr2	105916659	105916876	+	0	NA	Intergenic	AT_rich|Low_complexity|Low_complexity	-73061	NR_033993	99349	Mm.25661	NM_026992	ENSMUSG00000027166	Dnajc24	1700030A21Rik|2610027M02Rik|AV066965|AW240712|Dph4|MmDjC7|Zcsl3	DnaJ (Hsp40) homolog, subfamily C, member 24	protein-coding
common_peak2-22407-22-6-1.8399291830298-3.01815507148775	chr13	34154532	34155015	+	0	NA	intron (NM_026512, intron 5 of 6)	intron (NM_026512, intron 5 of 6)	15104	NM_009450	22151	Mm.422827	NM_009450	ENSMUSG00000058672	Tubb2a	M(beta)2|Tubb2	tubulin, beta 2A class IIA	protein-coding
common_peak1-12351-13-13--0.0288828914198356-0.309074325783021	chr17	56326040	56326731	+	0	NA	3' UTR (NM_172624, exon 21 of 21)	3' UTR (NM_172624, exon 21 of 21)	-3042	NM_080837	28106	Mm.294870	NM_080837		D17Wsu104e	Il25|Ly6elg	DNA segment, Chr 17, Wayne State University 104, expressed	protein-coding
common_peak1-12858-73-80-0.352545003540597-0.930402885492151	chr18	75368162	75370560	+	0	NA	intron (NM_027727, intron 14 of 16)	intron (NM_027727, intron 14 of 16)	87610	NR_045394	100503117	Mm.250517	NR_045393		2010010A06Rik	5033420E22Rik	RIKEN cDNA 2010010A06 gene	ncRNA
common_peak2-27939-14-7-0.899216160357645-0.947446088118041	chr4	24898064	24898552	+	0	NA	Intergenic	Intergenic	-2258	NM_030733	81006	Mm.160412	NM_030733	ENSMUSG00000040372	Gpr63	PSP24beta|Psp24-2	G protein-coupled receptor 63	protein-coding
common_peak2-21377-6-5--0.0195643903408542-0.947717972411649	chr11	78536596	78537026	+	0	NA	Intergenic	L1MA7|LINE|L1	-25884	NM_008702	18099	Mm.9001	NM_008702	ENSMUSG00000017376	Nlk	AI194375	nemo like kinase	protein-coding
unique_peak1-1731-6-1-1.5653981103803-1.56314192529759	chr13	99814306	99814749	+	0	NA	Intergenic	Intergenic	43349	NR_045495	69603	Mm.390632	NR_045495		2310020H05Rik	-	RIKEN cDNA 2310020H05 gene	ncRNA
unique_peak2-38829-4-7--1.02346051385325-1.09384600808989	chr7	141338029	141338358	+	0	NA	intron (NM_007400, intron 2 of 22)	intron (NM_007400, intron 2 of 22)	78587	NM_007400	11489	Mm.439714	NM_007400	ENSMUSG00000054555	Adam12	Mltna|mKIAA4001	a disintegrin and metallopeptidase domain 12 (meltrin alpha)	protein-coding
common_peak2-23412-45-77--0.425044193517377-0.883630128407083	chr15	59599075	59600526	+	0	NA	Intergenic	IAP-d-int|LTR|ERVK	26714	NR_045076	100503021	Mm.402924	NR_045076		Gm19510	-	predicted gene, 19510	ncRNA
unique_peak1-7085-9-0-3.18961340640422-3.01029995663981	chr9	23464817	23465373	+	0	NA	Intergenic	L1Md_T|LINE|L1	-437367	NM_175678	319239	Mm.130824	NM_175678	ENSMUSG00000043659	Npsr1	9330128H10Rik|GPRA|Gpr154|MVTR|PGR14|VRR1	neuropeptide S receptor 1	protein-coding
common_peak1-15302-36-44--0.0125320101619204-0.303469903643781	chr4	43442506	43443821	+	0	NA	Intergenic	Intergenic	-1157	NM_001162381	329831	Mm.454466	NM_177377	ENSMUSG00000042788	Fam166b	4833436C18Rik	family with sequence similarity 166, member B	protein-coding
common_peak2-28266-79-124--0.136949117485467-0.392295196716639	chr4	127021210	127022354	+	0	NA	Intergenic	Kanga2_a|DNA|Tc2	9543	NM_008127	14621	Mm.56906	NM_008127	ENSMUSG00000046623	Gjb4	Cnx30.3|Cx30.3|Gjb-4	gap junction protein, beta 4	protein-coding
unique_peak1-2803-11-6-0.701338662194009-1.32595962126035	chr17	21473888	21474399	+	0	NA	Intergenic	Intergenic	23162	NM_134200	171234	Mm.405416	NM_134200	ENSMUSG00000058030	Vmn1r237	V1rf3|Vfrf3	vomeronasal 1 receptor 237	protein-coding
unique_peak2-33157-3-6--1.22133801201688-1.08602067057793	chr10	89702620	89702941	+	0	NA	intron (NM_001128086, intron 9 of 24)	L1_Mus1|LINE|L1	-335692	NM_001177397	77531	Mm.440605	NM_181398	ENSMUSG00000058589	Anks1b	AIDA-1b|C030032C09Rik|E530015N03Rik|ENSMUSG00000078431|Gm10937|Gm1555	ankyrin repeat and sterile alpha motif domain containing 1B	protein-coding
common_peak1-15037-13-6-0.971117108580164-1.01572999746118	chr3	121685303	121685880	+	0	NA	intron (NM_172525, intron 3 of 22)	intron (NM_172525, intron 3 of 22)	29347	NM_172525	214137	Mm.229287	NM_172525	ENSMUSG00000039831	Arhgap29	6720461J18Rik|A830014I19|AU040217|B130017I01Rik|C76601|Parg1	Rho GTPase activating protein 29	protein-coding
common_peak1-10915-14-12-0.198776442216552-0.373562084705529	chr15	5445761	5446343	+	0	NA	promoter-TSS (NR_045274)	promoter-TSS (NR_045274)	-266	NR_045274	71432	Mm.291087	NR_045274		5430437J10Rik	-	RIKEN cDNA 5430437J10 gene	ncRNA
common_peak2-19796-37-54--0.255366642038841-0.440152849854807	chr1	87326806	87327901	+	0	NA	Intergenic	Intergenic	168032	NM_030194	109032	Mm.335802	NM_030194	ENSMUSG00000070034	Sp110	5031415C07Rik|52kDa|5830484A20Rik|ENSMUSG00000075603|Ifi75|Ipr1	Sp110 nuclear body protein	protein-coding
unique_peak1-6920-9-2-1.60465090568306-1.87199725847353	chr8	106577974	106578334	+	0	NA	Intergenic	MTB_Mm-int|LTR|MaLR	-47371	NM_009868	12562	Mm.21767	NM_009868	ENSMUSG00000031871	Cdh5	7B4|AA408225|Cd144|VE-Cad|VECD|VEcad|Vec	cadherin 5	protein-coding
unique_peak1-4042-16-7-1.11826364226806-1.23399803405144	chr2	59419401	59420210	+	0	NA	Intergenic	MT2A|LTR|ERVL	-30294	NM_198294	66860	Mm.27917	NM_198294	ENSMUSG00000035168	Tanc1	1200003E16Rik|Tanc|mKIAA1728	tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1	protein-coding
common_peak1-14349-18-16-0.225456309978012-0.397739447719379	chr2	165492613	165493506	+	0	NA	intron (NM_001271962, intron 2 of 15)	intron (NM_001271962, intron 2 of 15)	12261	NM_010165	14049	Mm.282719	NM_010165	ENSMUSG00000017897	Eya2	Eab1	eyes absent 2 homolog (Drosophila)	protein-coding
common_peak1-11667-29-19-0.790361985727748-1.34608670144205	chr16	25408394	25409651	+	0	NA	intron (NM_175165, intron 4 of 5)	intron (NM_175165, intron 4 of 5)	122119	NM_175165	71338	Mm.126851	NM_175165	ENSMUSG00000048399	Tprg	5430420C16Rik|Tprg1	transformation related protein 63 regulated	protein-coding
unique_peak2-34451-11-14--0.398197011356905-0.379391706698377	chr14	25457100	25457758	+	0	NA	Intergenic	B4A|SINE|B4	147526	NM_011297	20088	Mm.16775	NM_011297	ENSMUSG00000025290	Rps24	-	ribosomal protein S24	protein-coding
unique_peak1-6700-36-2-3.8943585854466-10.8574635801108	chr8	33992727	33993831	+	0	NA	Intergenic	Intergenic	67219	NM_001177589	100042715	Mm.291093	NM_001177589		Gm3985	-	predicted gene 3985	protein-coding
common_peak2-25831-11-14--0.398197011356905-0.379391706698377	chr19	38930769	38931464	+	0	NA	intron (NM_145952, intron 1 of 12)	intron (NM_145952, intron 1 of 12)	20047	NM_145952	209478	Mm.391153	NM_145952	ENSMUSG00000048720	Tbc1d12	BC033574	TBC1D12: TBC1 domain family, member 12	protein-coding
common_peak2-27840-21-27--0.237865656791368-0.339372226903478	chr3	152123058	152123690	+	0	NA	3' UTR (NM_001080755, exon 14 of 14)	3' UTR (NM_001080755, exon 14 of 14)	63726	NM_001287139	108946	Mm.379292	NM_198416	ENSMUSG00000039068	Zzz3	3110065C23Rik|6430567E01Rik|AA408566|AI481057|AW556059|R75514	zinc finger, ZZ domain containing 3	protein-coding
common_peak2-20274-10-11--0.228547155712387-0.31137425193576	chr1	191062520	191062897	+	0	NA	intron (NM_001281847, intron 6 of 6)	intron (NM_001281847, intron 6 of 6)	104524	NM_001159850	16526	Mm.33304	NM_010607	ENSMUSG00000037624	Kcnk2	A430027H14Rik|AI848635|TREK-1	potassium channel, subfamily K, member 2	protein-coding
unique_peak1-2375-12-4-1.32684789020028-2.04196296489515	chr15	95823595	95824117	+	0	NA	Intergenic	Intergenic	86127	NR_003627	402773	Mm.210567	NM_001033483		D030018L15Rik	-	nuclear receptor coactivator 2 pseudogene	pseudo
common_peak2-25987-10-5-0.771452844287613-1.33892459842472	chr19	54982387	54982737	+	0	NA	Intergenic	FordPrefect|DNA|Tip100	191375	NM_008149	14732	Mm.210196	NM_008149	ENSMUSG00000024978	Gpam	GPAT|GPAT1	glycerol-3-phosphate acyltransferase, mitochondrial	protein-coding
common_peak1-16929-10-13--0.450939577048835-0.386243247519795	chr6	83052657	83053202	+	0	NA	intron (NM_001081266, intron 1 of 8)	intron (NM_001081266, intron 1 of 8)	1419	NM_001081266	243510	Mm.436553	NM_001081266	ENSMUSG00000079511	Ccdc142	A230058J24Rik	coiled-coil domain containing 142	protein-coding
unique_peak2-34798-3-6--1.22133801201688-1.08602067057793	chr15	72653404	72653644	+	0	NA	intron (NM_001164641, intron 17 of 17)	L1_Mur2|LINE|L1	-12770	NR_002864	353342	Mm.440245	NR_002864		Peg13	-	paternally expressed 13	ncRNA
common_peak2-32393-47-95--0.650121075954608-1.92313441404633	chrX	135008305	135009292	+	0	NA	intron (NM_030688, intron 5 of 10)	MIRb|SINE|MIR	-264679	NM_026469	67944	Mm.443280	NM_026469	ENSMUSG00000071686	Tex13a	1700025D03Rik	testis expressed 13A	protein-coding
unique_peak1-4617-9-2-1.60465090568306-1.87199725847353	chr3	69012350	69012875	+	0	NA	Intergenic	MIRm|SINE|MIR	-13729	NM_027843	71619	Mm.98122	NM_027843	ENSMUSG00000098207	Arl14	9130014L17Rik|Arf7	ADP-ribosylation factor-like 14	protein-coding
common_peak2-31010-18-13-0.505564229170747-0.625923329873571	chr8	10964908	10965589	+	0	NA	Intergenic	Intergenic	-36791	NR_030715	665306	Mm.358758	NR_030715	ENSMUSG00000038917	3930402G23Rik	-	RIKEN cDNA 3930402G23 gene	ncRNA
unique_peak2-39843-3-7--1.41398308995928-1.23214870625617	chrX	53057280	53057674	+	0	NA	Intergenic	Intergenic	252704	NM_001220497	100039055	Mm.380174	NM_001220497		Gm16404	EG625711	predicted gene 16404	protein-coding
common_peak1-17542-81-122--0.0704649023306745-0.323745799370708	chr7	29247592	29249851	+	0	NA	intron (NM_001141921, intron 4 of 4)	(GAAA)n|Simple_repeat|Simple_repeat	11464	NM_001141921	80749	Mm.483073	NM_030562		Lrfn1	BC004018|SALM2|Semo1	leucine rich repeat and fibronectin type III domain containing 1	protein-coding
common_peak1-17780-37-42-0.0997283167837208-0.340524918943711	chr7	97579561	97580785	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	5351	NM_027298	70054	Mm.307198	NM_027298	ENSMUSG00000044362	Ccdc89	1700019B01Rik|AU022100|BOIP	coiled-coil domain containing 89	protein-coding
common_peak1-7452-17-11-0.633333837483882-0.769930178837768	chr1	75218325	75219238	+	0	NA	intron (NM_001243090, intron 2 of 2)	BGLII|LTR|ERVK	1448	NM_001243091	381272	Mm.239588	NM_001243090	ENSMUSG00000096094	A630095N17Rik	Gm1624	RIKEN cDNA A630095N17 gene	protein-coding
common_peak1-16188-35-55--0.3759846635951-0.620905664975282	chr5	92277780	92279039	+	0	NA	Intergenic	MTD|LTR|MaLR	-82083	NR_045383	73452	Mm.396233	NR_045383		1700063O14Rik	-	RIKEN cDNA 1700063O14 gene	ncRNA
common_peak2-23668-50-34-0.911657299533986-2.56421248726208	chr15	85656666	85658000	+	0	NA	Intergenic	Intergenic	-5170	NM_011105	18766	Mm.89965	NM_011105	ENSMUSG00000052496	Pkdrej	-	polycystic kidney disease (polycystin) and REJ (sperm receptor for egg jelly homolog, sea urchin)	protein-coding
unique_peak2-36667-4-5--0.608423014574403-0.909929411522249	chr3	30018275	30018680	+	0	NA	Intergenic	Intergenic	-106351	NM_007963	14013	Mm.56965	NM_007963	ENSMUSG00000027684	Mecom	D630039M04Rik|Evi-1|Evi1|Jbo|Mds|Mds1|Mds1-Evi1|Prdm3|Znfpr1b1	MDS1 and EVI1 complex locus	protein-coding
common_peak1-14150-34-30-0.427872216614391-0.737357778720995	chr2	132211794	132212984	+	0	NA	Intergenic	Intergenic	-1206	NM_144944	246313	Mm.283777	NM_144944	ENSMUSG00000050558	Prokr2	B830005M06Rik|EG-VEGRF2|Gpcr73l1|Gpr73l1|PKR2	prokineticin receptor 2	protein-coding
common_peak1-14203-14-14--0.00767443525087419-0.308519316180257	chr2	148731479	148732305	+	0	NA	Intergenic	Lx5|LINE|L1	-30688	NM_009976	13010	Mm.4263	NM_009976	ENSMUSG00000027447	Cst3	CysC	cystatin C	protein-coding
common_peak2-20518-13-9-0.456543935750406-0.53895475198017	chr10	60934843	60935422	+	0	NA	Intergenic	Intergenic	-3449	NM_153542	216011	Mm.136116	NM_153542	ENSMUSG00000037151	Lrrc20	BC036304	leucine rich repeat containing 20	protein-coding
unique_peak1-5480-11-5-0.923731083530457-1.477227296591	chr5	130169431	130170077	+	0	NA	intron (NM_172462, intron 1 of 2)	intron (NM_172462, intron 1 of 2)	6209	NM_172462	22648	Mm.135067	NM_172462	ENSMUSG00000051034	Zfp11	6720465D24|Krox-6|Zfp-11	zinc finger protein 11	protein-coding
unique_peak1-1457-8-1-2.00522241794757-2.05605744720049	chr12	108251855	108252362	+	0	NA	Intergenic	Intergenic	-297574	NR_015512	71033	Mm.159404	NR_015512	ENSMUSG00000085820	4933406K04Rik	4930426M03Rik|4930485I22Rik|4933427G14Rik	RIKEN cDNA 4933406K04 gene	ncRNA
unique_peak2-37033-7-7--0.200909169701811-0.97990265578305	chr3	131493821	131494271	+	0	NA	Intergenic	Intergenic	-254210	NM_020265	56811	Mm.103593	NM_020265	ENSMUSG00000028031	Dkk2	-	dickkopf homolog 2 (Xenopus laevis)	protein-coding
common_peak1-10566-22-14-0.740393509478886-0.983972868822056	chr14	21075315	21076079	+	0	NA	Intergenic	(GGA)n|Simple_repeat|Simple_repeat	12687	NM_029006	74571	Mm.105571	NM_029006	ENSMUSG00000023387	Kcnk16	4731413G05Rik|TALK-1|TALK1	potassium channel, subfamily K, member 16	protein-coding
common_peak2-26311-8-5-0.420259917226415-1.10484139239135	chr2	32606945	32607337	+	0	NA	exon (NM_001252547, exon 8 of 11)	exon (NM_001252547, exon 8 of 11)	-5613	NR_045485	30933	Mm.200695	NM_152800	ENSMUSG00000009563	Tor2a	Prosalusin	torsin family 2, member A	protein-coding
common_peak1-13481-131-176-0.237634309651597-0.916000798024435	chr2	18693862	18695142	+	0	NA	Intergenic	(GA)n|Simple_repeat|Simple_repeat	73853	NM_001001334	381350	Mm.330024	NM_001001334		BC061194	-	cDNA sequence BC061194	protein-coding
common_peak2-26467-18-10-0.853487532591054-1.03889213727317	chr2	76672558	76673129	+	0	NA	intron (NM_011652, intron 152 of 312)	intron (NM_011652, intron 152 of 312)	147761	NM_028004	22138	Mm.373672	NM_011652	ENSMUSG00000051747	Ttn	1100001C23Rik|2310036G12Rik|2310057K23Rik|2310074I15Rik|AF006999|AV006427|D330041I19Rik|D830007G01Rik|L56|mdm|shru	titin	protein-coding
common_peak2-24080-37-52--0.20192738307738-0.380848279231604	chr16	31290363	31292008	+	0	NA	Intergenic	Intergenic	-15402	NR_035427	100316676		NR_035427	miRBase:MI0006303	Mir1195	Mirn1195|mmu-mir-1195	microRNA 1195	ncRNA
unique_peak1-1516-10-2-1.77145284428761-2.09384600808989	chr13	6192326	6192795	+	0	NA	Intergenic	Intergenic	331825	NM_011803	23849	Mm.275036	NM_011803	ENSMUSG00000000078	Klf6	AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9	Kruppel-like factor 6	protein-coding
common_peak2-27533-88-74-0.786593718674652-3.57764330776532	chr3	95950457	95951815	+	0	NA	intron (NM_001025613, intron 7 of 12)	B3A|SINE|B2	-14757	NM_181409	194126	Mm.268536	NM_181409	ENSMUSG00000045934	Mtmr11	AI035306|BC051083|Cra	myotubularin related protein 11	protein-coding
unique_peak1-5535-8-1-2.00522241794757-2.05605744720049	chr5	140208930	140209353	+	0	NA	intron (NM_174850, intron 1 of 16)	intron (NM_174850, intron 1 of 16)	3146	NM_174850	231830	Mm.240510	NM_174850	ENSMUSG00000036718	Micall2	A930021H16Rik|JRAB|MICAL-L2|mFLJ00139	MICAL-like 2	protein-coding
unique_peak1-6523-8-2-1.42025991722641-1.65811743852845	chr7	120703969	120704587	+	0	NA	intron (NM_001285831, intron 10 of 12)	intron (NM_001285831, intron 10 of 12)	46930	NM_027379	67420	Mm.206919	NM_026143	ENSMUSG00000030759	Far1	2600011M19Rik|2900034E22Rik|3732409C05Rik|AI850429|Mlstd2	fatty acyl CoA reductase 1	protein-coding
common_peak2-27861-49-62-0.0290038995252671-0.307923848373175	chr3	154596684	154597320	+	0	NA	intron (NM_177066, intron 17 of 24)	intron (NM_177066, intron 17 of 24)	121369	NM_177066	435766	Mm.210428	NM_177066	ENSMUSG00000040086	Tnni3k	Cark|D830019J24Rik	TNNI3 interacting kinase	protein-coding
common_peak2-20461-18-51--1.38752056691274-3.34149582302667	chr10	42501754	42502869	+	0	NA	intron (NM_153055, intron 1 of 20)	intron (NM_153055, intron 1 of 20)	21009	NM_153055	140740	Mm.214344	NM_153055	ENSMUSG00000019802	Sec63	5730478J10Rik|AI649014|AW319215	SEC63-like (S. cerevisiae)	protein-coding
common_peak2-25968-12-13--0.158578936969966-0.301029995663979	chr19	53318410	53319080	+	0	NA	intron (NM_001164101, intron 13 of 13)	intron (NM_001164101, intron 13 of 13)	10950	NR_036590	69319	Mm.57452	NR_036590		1700001K23Rik	-	RIKEN cDNA 1700001K23 gene	ncRNA
unique_peak1-2978-13-1-2.77847203063777-3.64038867156802	chr17	75475774	75476458	+	0	NA	intron (NM_019919, intron 3 of 33)	MLT1A1|LTR|MaLR	71247	NM_019919	268977	Mm.269747	NM_019919	ENSMUSG00000001870	Ltbp1	9430031G15Rik|9830146M04|Ltbp-1|Tgfb|b2b1000Clo	latent transforming growth factor beta binding protein 1	protein-coding
common_peak1-16390-43-54-0.0012034719990428-0.303022200133692	chr5	124031400	124032521	+	0	NA	intron (NM_019765, intron 22 of 23)	B2_Mm2|SINE|B2	-8936	NM_029929	77573	Mm.41372	NM_029929	ENSMUSG00000029434	Vps33a	3830421M04Rik|AI503300|AW048546|AW554476|bf	vacuolar protein sorting 33A (yeast)	protein-coding
common_peak1-10067-13-11-0.193509529916613-0.379391706698377	chr13	21945178	21945712	+	0	NA	Intergenic	RLTR20A|LTR|ERVK	19833	NM_001110555	665622	Mm.471247	NM_001110555		Hist1h2br	Gm11277|OTTMUSG00000000449	histone cluster 1 H2br	protein-coding
unique_peak2-37245-5-9--1.02630843089322-1.21398586181642	chr4	98321758	98322350	+	0	NA	intron (NM_001005787, intron 8 of 15)	Lx8|LINE|L1	-71391	NM_001081202	381591	Mm.34340	NM_001081202	ENSMUSG00000087166	L1td1	AA546746|AB211064|D76865|ECAT11	LINE-1 type transposase domain containing 1	protein-coding
unique_peak1-7023-14-2-2.31425365963649-3.28500101358144	chr8	126584014	126584745	+	0	NA	Intergenic	MLT1A1|LTR|MaLR	37006	NM_001029876	382038	Mm.334891	NM_001029876	ENSMUSG00000031976	Urb2	C77575|mKIAA0133	URB2 ribosome biogenesis 2 homolog (S. cerevisiae)	protein-coding
unique_peak1-4933-7-0-2.79909083029819-2.40823996531185	chr4	62733034	62733477	+	0	NA	intron (NM_028326, intron 2 of 14)	intron (NM_028326, intron 2 of 14)	81921	NM_007443	11699	Mm.2197	NM_007443	ENSMUSG00000028356	Ambp	AI194774|ASPI|HI-30|Intin4|Itil|UTI	alpha 1 microglobulin/bikunin	protein-coding
common_peak1-14722-43-62--0.194716737976214-0.39202633512402	chr3	81932265	81933391	+	0	NA	intron (NM_021896, intron 1 of 8)	intron (NM_021896, intron 1 of 8)	16971	NM_021896	60596	Mm.143831	NM_021896	ENSMUSG00000033910	Gucy1a3	1200016O07Rik|sGC-alpha1	guanylate cyclase 1, soluble, alpha 3	protein-coding
unique_peak1-4345-12-4-1.32684789020028-2.04196296489515	chr2	154389050	154389635	+	0	NA	intron (NM_007891, intron 3 of 6)	intron (NM_007891, intron 3 of 6)	-4753	NM_021546	56846	Mm.143748	NM_021546	ENSMUSG00000027489	Necab3	2900010M17Rik|AI853434|Apba2bp|Nip1|XB51	N-terminal EF-hand calcium binding protein 3	protein-coding
common_peak2-22297-12-11-0.0638134843664826-0.337263207250336	chr13	17212885	17213385	+	0	NA	intron (NM_138654, intron 12 of 13)	intron (NM_138654, intron 12 of 13)	573464	NM_138654	192136	Mm.364180	NM_138654		Sugct	5033411D12Rik|D17907	succinyl-CoA glutarate-CoA transferase	protein-coding
common_peak2-25272-38-33-0.483989818048191-0.907712525274296	chr18	67983872	67985229	+	0	NA	intron (NM_027556, intron 14 of 45)	intron (NM_027556, intron 14 of 45)	24789	NM_027556	70799	Mm.30857	NM_027556	ENSMUSG00000024542	Cep192	4631422C13Rik|D430014P18Rik	centrosomal protein 192	protein-coding
unique_peak2-32955-9-19--1.13231468848314-1.09394599973099	chr10	42082503	42083240	+	0	NA	intron (NM_145743, intron 7 of 12)	intron (NM_145743, intron 7 of 12)	-86323	NM_019740	56484	Mm.338613	NM_019740	ENSMUSG00000048756	Foxo3	1110048B16Rik|2010203A17Rik|C76856|FKHRL1|Fkhr2|Foxo3a	forkhead box O3	protein-coding
common_peak1-11983-9-3-1.18961340640422-1.57096726280955	chr17	10501454	10501970	+	0	NA	intron (NM_021881, intron 1 of 6)	intron (NM_021881, intron 1 of 6)	10514	NM_021881	19317	Mm.130694	NM_021881	ENSMUSG00000062078	Qk	1110003F05Rik|1500005P18|QkI|l(17)-1Wis|l17Wis1	quaking	protein-coding
common_peak1-13684-51-65-0.0305297062441197-0.307610466878301	chr2	29710923	29712848	+	0	NA	Intergenic	MIR3|SINE|MIR	-10638	NR_029838	723904		NR_029838	miRBase:MI0000741	Mir219a-2	Mir219-2|Mirn219-2|mmu-mir-219a-2	microRNA 219a-2	ncRNA
common_peak2-19634-5-6--0.511735258063458-0.947717972411649	chr1	39368795	39369205	+	0	NA	intron (NM_008719, intron 6 of 20)	intron (NM_008719, intron 6 of 20)	-55696	NM_053257	114641	Mm.379302	NM_053257	ENSMUSG00000073702	Rpl31	-	ribosomal protein L31	protein-coding
unique_peak2-38372-5-11--1.28934283672701-1.477227296591	chr7	12881144	12881619	+	0	NA	Intergenic	Intergenic	-8773	NM_134234	171268	Mm.377220	NM_134234	ENSMUSG00000058132	Vmn1r82	V1rg12	vomeronasal 1 receptor 82	protein-coding
unique_peak2-36924-7-8--0.370834171144123-1.00793137938329	chr3	101411523	101412096	+	0	NA	Intergenic	Intergenic	-3179	NM_144900	11928	Mm.280103	NM_144900	ENSMUSG00000033161	Atp1a1	Atpa-1|BC010319	ATPase, Na+/K+ transporting, alpha 1 polypeptide	protein-coding
common_peak1-9296-66-47-0.933521163704685-3.52222159640796	chr11	88995506	88997418	+	0	NA	Intergenic	MLT1H1|LTR|MaLR	61307	NM_001033266	217071	Mm.342127	NM_001033266	ENSMUSG00000072553	Gm525	-	predicted gene 525	protein-coding
common_peak2-25135-5-7--0.704380336005853-1.01466476204226	chr18	42054177	42054515	+	0	NA	intron (NM_029942, intron 5 of 6)	Lx2A|LINE|L1	56502	NM_029942	77619	Mm.30649	NM_029942	ENSMUSG00000056671	Prelid2	1700003A01Rik|C330008K14Rik	PRELI domain containing 2	protein-coding
common_peak2-32014-12-21--0.810655633549659-0.713635438203849	chr9	73905206	73906105	+	0	NA	Intergenic	Intergenic	-52486	NM_001033500	546144	Mm.335289	NM_177908	ENSMUSG00000044976	Wdr72	AW558070|D230040E23	WD repeat domain 72	protein-coding
unique_peak2-33483-1-5--2.2120195109379-1.32905871926422	chr11	70000628	70000980	+	0	NA	Intergenic	L1MCa|LINE|L1	20679	NM_010796	17312	Mm.252405	NM_010796	ENSMUSG00000000318	Clec10a	CD301a|M-ASGP-BP-1|Mgl|Mgl1	C-type lectin domain family 10, member A	protein-coding
common_peak2-26266-17-42--1.20796841649706-2.23152841032562	chr2	30470101	30470900	+	0	NA	Intergenic	Intergenic	19936	NM_030137	78617	Mm.40413	NM_030137	ENSMUSG00000047363	Cstad	9530039B02Rik	CSA-conditional, T cell activation-dependent protein	protein-coding
common_peak2-19912-13-22--0.745089925419244-0.690311289528838	chr1	120120278	120121005	+	0	NA	Intergenic	L1_Mus1|LINE|L1	87068	NM_011650	22099	Mm.426637	NM_011650	ENSMUSG00000026374	Tsn	2610034C24Rik|AU040286|C3PO|TB-RBP	translin	protein-coding
common_peak1-14433-10-19--0.965512749878593-0.917676348953458	chr2	180966460	180967112	+	0	NA	exon (NM_183162, exon 9 of 19)	exon (NM_183162, exon 9 of 19)	9946	NM_183162	229003	Mm.315872	NM_183162	ENSMUSG00000027580	Helz2	PDIP1|Pric285|mKIAA1769|mPDIP1	helicase with zinc finger 2, transcriptional coactivator	protein-coding
common_peak1-16263-13-1-2.77847203063777-3.64038867156802	chr5	107597728	107598338	+	0	NA	intron (NM_011578, intron 4 of 16)	intron (NM_011578, intron 4 of 16)	120581	NM_011578	21814	Mm.200775	NM_011578	ENSMUSG00000029287	Tgfbr3	1110036H20Rik|AU015626|AW215636|TBRIII	transforming growth factor, beta receptor III	protein-coding
unique_peak1-6642-10-1-2.35641534500877-2.57096726280955	chr8	11155719	11156279	+	0	NA	Intergenic	Intergenic	-147569	NM_001081212	384783	Mm.407207	NM_001081212	ENSMUSG00000038894	Irs2	Irs-2	insulin receptor substrate 2	protein-coding
unique_peak1-2119-10-4-1.03448725012141-1.5150158574804	chr15	43177881	43178472	+	0	NA	Intergenic	RMER19A|LTR|ERVK	-63894	NM_008388	16341	Mm.289992	NM_008388	ENSMUSG00000022336	Eif3e	48kDa|Eif3s6|Int6|eIF3-p46|eIF3-p48	eukaryotic translation initiation factor 3, subunit E	protein-coding
common_peak2-29572-78-78-0.503040345983432-1.62934253970067	chr6	47788007	47789215	+	0	NA	intron (NM_173034, intron 1 of 4)	MER5A1|DNA|MER1_type	2951	NM_027477	272347	Mm.169059	NM_027477	ENSMUSG00000062519	Zfp398	5730513I23Rik	zinc finger protein 398	protein-coding
unique_peak1-2173-14-5-1.31425365963649-1.4372489031793	chr15	61522885	61523605	+	0	NA	Intergenic	L2a|LINE|L2	82761	NR_040350	432956	Mm.404918	NR_040350		D030024E09Rik	-	RIKEN cDNA D030024E09 gene	ncRNA
common_peak1-10544-30-38--0.115726809370376-0.312769113767451	chr14	18270256	18270988	+	0	NA	Intergenic	ORR1A1-int|LTR|MaLR	-222852	NM_001113417	21834	Mm.32563	NM_009380	ENSMUSG00000021779	Thrb	Nr1a2|T3R[b]|T3Rbeta|Thrb1|Thrb2|c-erbAbeta	thyroid hormone receptor beta	protein-coding
unique_peak1-177-10-4-1.03448725012141-1.5150158574804	chr1	74302777	74303284	+	0	NA	intron (NM_029711, intron 6 of 9)	MTD|LTR|MaLR	19906	NM_029711	76709	Mm.337038	NM_029711	ENSMUSG00000006304	Arpc2	2210023N03Rik|34kDa|p34-Arc	actin related protein 2/3 complex, subunit 2	protein-coding
common_peak2-21505-34-22-0.858506570944253-1.68120055799038	chr11	93987069	93987953	+	0	NA	TTS (NM_001025429)	TTS (NM_001025429)	81992	NM_001025429	70834	Mm.260737	NM_027569	ENSMUSG00000020859	Spag9	3110018C07Rik|4733401I23Rik|4831406C20Rik|AW552012|JLP|JSAP2|JSAP2a|Jip4|Mapk8ip4|syd1	sperm associated antigen 9	protein-coding
common_peak1-10294-15-12-0.311725032414564-0.425539671739611	chr13	63253412	63254191	+	0	NA	intron (NM_001289926, intron 5 of 15)	Lx4B|LINE|L1	-87537	NR_110520	72061	Mm.188105	NM_028079	ENSMUSG00000021458	2010111I01Rik	2300006M17Rik|AP-O|Aopep	RIKEN cDNA 2010111I01 gene	protein-coding
common_peak1-17488-14-18--0.348711353085941-0.360333814299795	chr7	24902619	24903293	+	0	NA	intron (NM_021307, intron 1 of 4)	RSINE1|SINE|B4	5617	NM_021307	57745	Mm.82678	NM_021307	ENSMUSG00000052675	Zfp112	Znf112|Znf228	zinc finger protein 112	protein-coding
unique_peak2-39998-5-6--0.511735258063458-0.947717972411649	chrX	164246854	164247280	+	0	NA	intron (NM_001290427, intron 2 of 17)	intron (NM_001290427, intron 2 of 17)	45942	NM_001290428	333605	Mm.426168	NM_001033330	ENSMUSG00000049176	Frmpd4	Gm196|PKAP1|Pdzd10|Pdzk10|Preso1|preso	FERM and PDZ domain containing 4	protein-coding
unique_peak2-35638-7-6--0.00826409175941478-0.97990265578305	chr17	88440014	88440447	+	0	NA	intron (NM_001081034, intron 1 of 22)	intron (NM_001081034, intron 1 of 22)	24395	NM_001081034	225055	Mm.386857	NM_001081034	ENSMUSG00000005371	Fbxo11	C80048|Jf	F-box protein 11	protein-coding
common_peak1-17903-16-12-0.417823924126969-0.489164546851866	chr7	122101113	122101987	+	0	NA	non-coding (NR_040317, exon 2 of 4)	non-coding (NR_040317, exon 2 of 4)	6762	NR_040319	101786	Mm.395157	NR_040317		A730082K24Rik	AU044236	RIKEN cDNA A730082K24 gene	ncRNA
unique_peak1-657-14-4-1.57728806547028-2.4322161449009	chr10	59641165	59641795	+	0	NA	Intergenic	ID_B1|SINE|B4	40528	NM_016803	53374	Mm.12866	NM_016803	ENSMUSG00000057337	Chst3	C6ST|C6ST-1|GST-0	carbohydrate (chondroitin 6/keratan) sulfotransferase 3	protein-coding
common_peak2-28963-30-42--0.256589345210225-0.401350871931209	chr5	103736882	103737714	+	0	NA	Intergenic	Intergenic	-9250	NR_040699	74624	Mm.389662	NR_040699		4930429D17Rik	-	RIKEN cDNA 4930429D17 gene	ncRNA
unique_peak2-38141-3-6--1.22133801201688-1.08602067057793	chr6	85075434	85075739	+	0	NA	exon (NM_001034902, exon 1 of 3)	exon (NM_001034902, exon 1 of 3)	502	NM_001034902	545861	Mm.321419	NM_001034902	ENSMUSG00000072952	Gm5878	EG545861	predicted gene 5878	protein-coding
common_peak1-13334-19-21--0.0567442919756109-0.301029995663971	chr19	43674993	43676031	+	0	NA	Intergenic	CpG	-11303	NM_008699	18089	Mm.56994	NM_008699	ENSMUSG00000044220	Nkx2-3	Nkx-2.3|Nkx2.3|tinman	NK2 homeobox 3	protein-coding
unique_peak1-4618-7-3-0.799090830298189-1.23214870625617	chr3	69524211	69524650	+	0	NA	Intergenic	Intergenic	-1547	NM_133787	97112	Mm.21062	NM_133787	ENSMUSG00000027787	Nmd3	C87860	NMD3 homolog (S. cerevisiae)	protein-coding
common_peak1-9277-36-46--0.0752677655098832-0.303416277109641	chr11	87748828	87749760	+	0	NA	Intergenic	RSINE1|SINE|B4	-20789	NM_146412	258407	Mm.271337	NM_146412	ENSMUSG00000060787	Olfr464	MOR240-2	olfactory receptor 464	protein-coding
common_peak2-30927-4-6--0.830815435910851-0.989110657569874	chr7	144972918	144973264	+	0	NA	Intergenic	Intergenic	343734	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
unique_peak2-35055-8-7-0.00522241794757061-1.00793137938329	chr16	10982007	10982440	+	0	NA	intron (NM_019980, intron 1 of 3)	B1_Mus1|SINE|Alu	10991	NM_019980	56722	Mm.294753	NM_019980	ENSMUSG00000022500	Litaf	3222402J11Rik|C85531|N4WBP3|TBX1	LPS-induced TN factor	protein-coding
unique_peak1-2161-9-3-1.18961340640422-1.57096726280955	chr15	59823792	59824349	+	0	NA	Intergenic	Intergenic	24103	NM_027668	71088	Mm.425950	NM_027668	ENSMUSG00000071749	4933412E24Rik	-	RIKEN cDNA 4933412E24 gene	protein-coding
common_peak1-16911-40-26-0.90408818058763-2.09593985174544	chr6	72615876	72617950	+	0	NA	intron (NM_009332, intron 3 of 11)	intron (NM_009332, intron 3 of 11)	37088	NR_040421	100038714	Mm.321330	NR_040421		Gm15401	ENSMUSG00000072999|OTTMUSG00000021199	predicted gene 15401	ncRNA
unique_peak1-2113-67-10-3.0849798641457-17.0537996199373	chr15	41611502	41613536	+	0	NA	intron (NM_001130166, intron 3 of 16)	intron (NM_001130166, intron 3 of 16)	-8061	NM_001130165	170719	Mm.254267	NM_130885	ENSMUSG00000022307	Oxr1	2210416C20Rik|C7|C7B	oxidation resistance 1	protein-coding
unique_peak1-5528-8-1-2.00522241794757-2.05605744720049	chr5	139404581	139405077	+	0	NA	Intergenic	MLT1K|LTR|MaLR	66078	NM_008808	18590	Mm.2675	NM_008808	ENSMUSG00000025856	Pdgfa	-	platelet derived growth factor, alpha	protein-coding
common_peak1-8735-10-7-0.356415345008769-1.12966497611638	chr11	3504527	3505053	+	0	NA	Intergenic	L1MC3|LINE|L1	42749	NR_110490	544752	Mm.390314	NR_002321	ENSMUSG00000056579	Tug1	AI316828	taurine upregulated gene 1	ncRNA
common_peak1-11243-8-10--0.454209200689727-1.078512453669	chr15	79927862	79928297	+	0	NA	intron (NM_207708, intron 1 of 3)	intron (NM_207708, intron 1 of 3)	6315	NM_207708	20972	Mm.230301	NM_009303	ENSMUSG00000022415	Syngr1	R75468|Syngr1b|p29	synaptogyrin 1	protein-coding
common_peak1-9954-18-11-0.727956650507195-0.876666802405043	chr12	111697901	111698693	+	0	NA	intron (NM_001135001, intron 2 of 13)	intron (NM_001135001, intron 2 of 13)	12908	NM_001135001	26931	Mm.240396	NM_012023	ENSMUSG00000017843	Ppp2r5c	2610043M05Rik|2700063L20Rik|AI060890|AW545884|C85228|D12Bwg0916e|mKIAA0044	protein phosphatase 2, regulatory subunit B', gamma	protein-coding
unique_peak1-517-9-0-3.18961340640422-3.01029995663981	chr1	183993628	183994071	+	0	NA	Intergenic	Intergenic	-43738	NM_010135	13800	Mm.87759	NM_008680	ENSMUSG00000022995	Enah	Mena|NDPP-1|Ndpp1|WBP8	enabled homolog (Drosophila)	protein-coding
common_peak2-21418-16-15-0.118263642268062-0.328191099940264	chr11	84128994	84129661	+	0	NA	exon (NM_133360, exon 37 of 54)	exon (NM_133360, exon 37 of 54)	120387	NM_133360	107476	Mm.31374	NM_133360	ENSMUSG00000020532	Acaca	A530025K05Rik|Acac|Acc1|Gm738	acetyl-Coenzyme A carboxylase alpha	protein-coding
unique_peak2-35359-2-5--1.50241675698448-1.08602067057793	chr17	26468092	26468479	+	0	NA	Intergenic	L1MCa|LINE|L1	78430	NR_037905	66978	Mm.440216	NM_025881	ENSMUSG00000024188	Luc7l	1810045C04Rik|2410018D03Rik	Luc7 homolog (S. cerevisiae)-like	protein-coding
common_peak2-26307-16-10-0.658832023630764-0.699649909729472	chr2	32503167	32503749	+	0	NA	intron (NM_001146348, intron 1 of 14)	intron (NM_001146348, intron 1 of 14)	1343	NM_001146348	13805	Mm.225297	NM_007932	ENSMUSG00000026814	Eng	AI528660|AI662476|CD105|Endo|S-endoglin	endoglin	protein-coding
unique_peak2-39467-9-7-0.18961340640422-1.05908390183068	chr9	56097609	56098101	+	0	NA	intron (NM_172924, intron 4 of 6)	PB1D10|SINE|Alu	-88978	NM_019793	56434	Mm.28484	NM_019793	ENSMUSG00000032324	Tspan3	1700055K04Rik|TM4-A|Tm4sf8	tetraspanin 3	protein-coding
unique_peak1-928-24-4-2.47128180788035-4.69785539356838	chr11	52045970	52047027	+	0	NA	intron (NM_011543, intron 1 of 5)	intron (NM_011543, intron 1 of 5)	1001	NM_011543	21402	Mm.42944	NM_011543	ENSMUSG00000036309	Skp1a	15kDa|2610043E24Rik|2610206H23Rik|EMC19|OCP-II|OCP2|SKP1|Tceb1l|p19A|p19Skp1	S-phase kinase-associated protein 1A	protein-coding
common_peak2-25279-2-12--2.61789397440441-2.55640854263862	chr18	69195933	69196454	+	0	NA	Intergenic	Intergenic	-14266	NR_105780	102465187		NR_105780	miRBase:MI0021890	Mir145b	mmu-mir-145b	microRNA mir-145b	ncRNA
common_peak1-16281-26-51--0.77254062598263-1.49688973786043	chr5	110447552	110448698	+	0	NA	Intergenic	IAPEY3-int|LTR|ERVK	22579	NM_145563	69504	Mm.441438	NM_145563	ENSMUSG00000066613	Zfp932	2310001H12Rik|Znf431	zinc finger protein 932	protein-coding
common_peak2-19830-61-84--0.0266416063883614-0.302330286314607	chr1	90224994	90226604	+	0	NA	intron (NM_134252, intron 7 of 26)	intron (NM_134252, intron 7 of 26)	22512	NM_134252	171382	Mm.218753	NM_134252	ENSMUSG00000036251	Trpm8	CMR1|LTRPC6|LTrpC-6|TRPP8|Trp-p8	transient receptor potential cation channel, subfamily M, member 8	protein-coding
common_peak2-27001-15-10-0.552733131918359-0.604422558181019	chr2	170205037	170205469	+	0	NA	intron (NR_040610, intron 7 of 7)	intron (NR_040610, intron 7 of 7)	23392	NR_040610	73303	Mm.443297	NR_040610	ENSMUSG00000086999	Bcas1os2	1700040N02Rik	breast carcinoma amplified sequence 1, opposite strand 2	ncRNA
common_peak1-15270-14-7-0.899216160357645-0.947446088118041	chr4	32518571	32519307	+	0	NA	intron (NM_001109661, intron 1 of 4)	intron (NM_001109661, intron 1 of 4)	14529	NM_001109661	12014	Mm.491223	NM_007521	ENSMUSG00000040270	Bach2	E030004N02Rik	BTB and CNC homology 2	protein-coding
common_peak2-25356-85-110-0.160987381774545-0.483022674584033	chr18	80469226	80470745	+	0	NA	3' UTR (NM_001164424, exon 4 of 4)	3' UTR (NM_001164424, exon 4 of 4)	16940	NM_001164423	66943	Mm.29247	NM_025861	ENSMUSG00000034006	Pqlc1	2310009N05Rik|4933425L21Rik|5730564E11Rik|C78974	PQ loop repeat containing 1	protein-coding
common_peak1-14231-45-17-1.69043302390256-5.44514020616609	chr2	152785047	152786715	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-2340	NM_029064	74711	Mm.44746	NM_029064	ENSMUSG00000074673	Ttll9	1700016F23Rik|4930509O20Rik|AW046572	tubulin tyrosine ligase-like family, member 9	protein-coding
unique_peak2-32988-5-10--1.16381195464315-1.33892459842472	chr10	59943255	59943715	+	0	NA	intron (NM_023370, intron 12 of 68)	intron (NM_023370, intron 12 of 68)	81011	NM_001164374	100302688	Mm.444135	NM_001164374	ENSMUSG00000090439	Gm17455	-	predicted gene, 17455	protein-coding
common_peak1-12328-15-28--0.845816244571916-1.02077663956385	chr17	48738154	48738948	+	0	NA	Intergenic	B3|SINE|B2	144325	NM_152823	76589	Mm.311629	NM_152823	ENSMUSG00000043592	Unc5cl	2510009H09Rik|BB155270|Zud	unc-5 homolog C (C. elegans)-like	protein-coding
common_peak2-21001-0-4--3.16205902536157-1.10720996964787	chr11	23730070	23730355	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-59242	NM_009044	19696	Mm.4869	NM_009044	ENSMUSG00000020275	Rel	c-Rel	reticuloendotheliosis oncogene	protein-coding
common_peak1-12038-13-11-0.193509529916613-0.379391706698377	chr17	17909605	17910317	+	0	NA	Intergenic	RMER1B|Other|Other	-57191	NR_029536	387230		NR_029536		Mir99b	Mirn99b|mmu-mir-99b	microRNA 99b	ncRNA
common_peak2-32302-15-15-0.0121647505556561-0.30803596071496	chrX	42148568	42149193	+	0	NA	Intergenic	L1MC|LINE|L1	-5506	NM_178739	245404	Mm.55685	NM_178739	ENSMUSG00000045284	Dcaf12l1	9330180J20|A230038L21Rik|Decaf12l1|Wdr40b	DDB1 and CUL4 associated factor 12-like 1	protein-coding
common_peak1-15362-12-11-0.0638134843664826-0.337263207250336	chr4	57915857	57916365	+	0	NA	Intergenic	PB1D10|SINE|Alu	13025	NM_178727	242484	Mm.23214	NM_178727	ENSMUSG00000052117	D630039A03Rik	-	RIKEN cDNA D630039A03 gene	protein-coding
common_peak2-21026-28-30-0.0987628094345876-0.332062764479303	chr11	32221375	32222615	+	0	NA	Intergenic	MTEb-int|LTR|MaLR	21926	NM_175000	216635	Mm.338482	NM_175000	ENSMUSG00000020295	Hbq1a	A230090E05Rik|Gm876|Hbq1|Hbqt2	hemoglobin, theta 1A	protein-coding
common_peak1-12322-12-30--1.30542032529924-1.80107744087172	chr17	47737220	47737856	+	0	NA	TTS (NM_007632)	TTS (NM_007632)	7122	NM_007632	12445	Mm.27291	NM_007632	ENSMUSG00000034165	Ccnd3	9230106B05Rik|AA682053|AL024085|AW146355|C78795	cyclin D3	protein-coding
common_peak2-25292-11-9-0.186765489364251-0.344532117358383	chr18	70052235	70052675	+	0	NA	Intergenic	Intergenic	-32758	NM_201362	381175	Mm.266831	NM_201362	ENSMUSG00000038903	Ccdc68	BC046343	coiled-coil domain containing 68	protein-coding
unique_peak2-35698-2-4--1.23938235115068-0.931118710592187	chr18	25284964	25285255	+	0	NA	TTS (NM_001142698)	TTS (NM_001142698)	39357	NM_001142697	66648	Mm.263189	NM_001004361	ENSMUSG00000024269	Tpgs2	5730437P09Rik|5730494M16Rik|AI666318|Pgs2	tubulin polyglutamylase complex subunit 2	protein-coding
common_peak2-29984-17-18--0.0296311752385474-0.306899554715732	chr6	121159682	121160467	+	0	NA	promoter-TSS (NM_017379)	promoter-TSS (NM_017379)	-714	NM_017379	53857	Mm.32884	NM_017379		Tuba8	-	tubulin, alpha 8	protein-coding
unique_peak2-35866-13-19--0.543456064249594-0.466170754204149	chr18	78294473	78295193	+	0	NA	Intergenic	Intergenic	25332	NM_001171010	108052	Mm.33832	NM_028122	ENSMUSG00000059336	Slc14a1	2610507K20Rik|3021401A05Rik|UT-B|Utb1	solute carrier family 14 (urea transporter), member 1	protein-coding
unique_peak2-35587-4-4--0.345388608740609-0.864171920961574	chr17	75273198	75273620	+	0	NA	Intergenic	Intergenic	-131460	NM_019919	268977	Mm.269747	NM_019919	ENSMUSG00000001870	Ltbp1	9430031G15Rik|9830146M04|Ltbp-1|Tgfb|b2b1000Clo	latent transforming growth factor beta binding protein 1	protein-coding
common_peak1-16996-34-48--0.232641317113942-0.387953346623085	chr6	88518020	88519528	+	0	NA	intron (NM_001278671, intron 5 of 5)	MMETn-int|LTR|ERVK	-49980	NM_016906	53421	Mm.28375	NM_016906	ENSMUSG00000030082	Sec61a1	AA408394|AA410007|Sec61a	Sec61 alpha 1 subunit (S. cerevisiae)	protein-coding
common_peak1-16588-31-54--0.556121042711537-0.994719720785867	chr5	148551986	148552985	+	0	NA	Intergenic	B1F|SINE|Alu	-14921	NM_010228	14254	Mm.389712	NM_010228	ENSMUSG00000029648	Flt1	AI323757|Flt-1|VEGFR-1|VEGFR1|sFlt1	FMS-like tyrosine kinase 1	protein-coding
unique_peak1-2342-10-0-3.35641534500877-3.31132995230379	chr15	85356399	85357154	+	0	NA	Intergenic	B4A|SINE|B4	-23119	NM_001256072	328577	Mm.212960	NM_001256072	ENSMUSG00000096607	7530416G11Rik	-	RIKEN cDNA 7530416G11 gene	protein-coding
common_peak1-11645-16-14-0.211373046659543-0.364171515310935	chr16	23102412	23103182	+	0	NA	Intergenic	Intergenic	-4744	NM_001123038	13682	Mm.260084	NM_013506	ENSMUSG00000022884	Eif4a2	4833432N07Rik|BM-010|Ddx2b|Eif4|eIF-4A-II|eIF4A-II	eukaryotic translation initiation factor 4A2	protein-coding
common_peak1-13807-16-23--0.466698858453094-0.497202060940027	chr2	48949523	48950264	+	0	NA	intron (NM_029924, intron 3 of 16)	MIR|SINE|MIR	144865	NM_029924	109241	Mm.440436	NM_029924	ENSMUSG00000036792	Mbd5	9430004D19Rik|AA536666|AI426407|C030040A15Rik|Gm1630|OTTMUSG00000012483	methyl-CpG binding domain protein 5	protein-coding
unique_peak2-35679-17-11-0.633333837483882-0.769930178837768	chr18	12862126	12862660	+	0	NA	intron (NM_028341, intron 6 of 13)	intron (NM_028341, intron 6 of 13)	-10927	NR_035471	100316699		NR_035471		Mir1948	mmu-mir-1948	microRNA 1948	ncRNA
common_peak2-19914-42-106--0.999137658533963-4.03831682545896	chr1	125434098	125435684	+	0	NA	intron (NM_199021, intron 5 of 25)	B3A|SINE|B2	507245	NM_199021	269109	Mm.483255	NM_199021	ENSMUSG00000036815	Dpp10	6430601K09Rik|DPP X|Dprp3	dipeptidylpeptidase 10	protein-coding
common_peak2-21982-5-6--0.511735258063458-0.947717972411649	chr12	51848351	51848740	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-98335	NM_008858	18760	Mm.133719	NM_008858	ENSMUSG00000002688	Prkd1	PKD|PKD1|Pkcm|Prkcm	protein kinase D1	protein-coding
unique_peak2-34189-6-5--0.0195643903408542-0.947717972411649	chr13	37434375	37434816	+	0	NA	Intergenic	Intergenic	-2619	NM_010745	17084	Mm.2639	NM_010745	ENSMUSG00000021423	Ly86	MD-1|MD1	lymphocyte antigen 86	protein-coding
common_peak1-11876-22-43--0.812147513549893-1.34810744351377	chr16	94525859	94526798	+	0	NA	Intergenic	Lx8|LINE|L1	-16865	NM_139145	110948	Mm.30921	NM_139145	ENSMUSG00000040820	Hlcs	410I21.SP6|D16Jhu34	holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase)	protein-coding
common_peak1-18670-111-147-0.208240425781218-0.69472754680055	chr8	118285215	118287846	+	0	NA	Intergenic	Intergenic	-55736	NM_001025577	17132	Mm.275549	NM_001025577		Maf	2810401A20Rik|A230108G15Rik|AW047063|c-maf	avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog	protein-coding
common_peak1-11326-15-8-0.842239749113344-0.891319708951327	chr15	85663394	85664084	+	0	NA	intron (NM_001033337, intron 2 of 13)	intron (NM_001033337, intron 2 of 13)	1005	NM_001033337	239570	Mm.151748	NM_001033337	ENSMUSG00000035944	Ttc38	9030019H09	tetratricopeptide repeat domain 38	protein-coding
unique_peak2-38860-7-7--0.200909169701811-0.97990265578305	chr7	145030437	145030827	+	0	NA	Intergenic	B4|SINE|B4	401275	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
unique_peak2-38740-4-4--0.345388608740609-0.864171920961574	chr7	113447774	113448162	+	0	NA	Intergenic	AT_rich|Low_complexity|Low_complexity	20074	NR_030720	668128	Mm.484022	NR_030720		Gm8989	EG668128|Gm21911	very large inducible GTPase 1 pseudogene	pseudo
unique_peak1-7411-7-0-2.79909083029819-2.40823996531185	chrX	136340269	136340796	+	0	NA	intron (NM_016675, intron 1 of 1)	intron (NM_016675, intron 1 of 1)	5185	NM_016675	12738	Mm.117068	NM_016675	ENSMUSG00000047230	Cldn2	AL022813	claudin 2	protein-coding
unique_peak2-36762-3-7--1.41398308995928-1.23214870625617	chr3	65029866	65030193	+	0	NA	intron (NM_001289450, intron 2 of 14)	ORR1D2|LTR|MaLR	38004	NM_001289450	16497	Mm.316402	NM_010597	ENSMUSG00000027827	Kcnab1	Akr8a8|Kvbeta1.1|mKv(beta)1	potassium voltage-gated channel, shaker-related subfamily, beta member 1	protein-coding
common_peak2-30864-57-58-0.383389990717087-0.883630128407083	chr7	139280409	139282141	+	0	NA	intron (NM_018867, intron 4 of 13)	ID_B1|SINE|B4	65149	NM_018867	55987	Mm.471654	NM_018867	ENSMUSG00000030862	Cpxm2	4632435C11Rik|CPX-2|Cpx2	carboxypeptidase X 2 (M14 family)	protein-coding
common_peak2-20853-29-17-0.942365079172799-1.68242911687175	chr11	72466209	72467147	+	0	NA	intron (NM_025985, intron 1 of 5)	intron (NM_025985, intron 1 of 5)	-36826	NM_009671	11736	Mm.10313	NM_009671	ENSMUSG00000020790	Ankfy1	Ankhzn|ZFYVE14|mKIAA1255	ankyrin repeat and FYVE domain containing 1	protein-coding
common_peak1-7898-17-9-0.896368243317676-1.09394599973099	chr1	135510197	135510923	+	0	NA	Intergenic	B3|SINE|B2	-3703	NM_009227	20643	Mm.249110	NM_009227	ENSMUSG00000090553	Snrpe	AL022645|C76690|SME	small nuclear ribonucleoprotein E	protein-coding
unique_peak1-6274-16-5-1.53330114154691-1.80287260729378	chr7	27448819	27449413	+	0	NA	Intergenic	Intergenic	22333	NM_001081148	243881	Mm.294678	NM_001081148	ENSMUSG00000040650	Cyp2b23	EG243881	cytochrome P450, family 2, subfamily b, polypeptide 23	protein-coding
unique_peak1-2466-8-3-1.00522241794757-1.39487600375387	chr16	21184283	21184838	+	0	NA	Intergenic	RLTR11A|LTR|ERVK	-20308	NM_010143	13845	Mm.6972	NM_010143	ENSMUSG00000005958	Ephb3	AW456895|Cek10|Etk2|HEK2|MDK5|Sek4|Tyro6	Eph receptor B3	protein-coding
common_peak2-24764-25-52--0.866070549218093-1.7388889233551	chr17	56218171	56218985	+	0	NA	promoter-TSS (NM_008233)	promoter-TSS (NM_008233)	-502	NM_008233	15193	Mm.279188	NM_008233	ENSMUSG00000002833	Hdgfrp2	HRP-2	hepatoma-derived growth factor, related protein 2	protein-coding
common_peak2-30501-15-24--0.631691439219068-0.650819692678081	chr7	64155947	64156894	+	0	NA	intron (NM_008074, intron 5 of 9)	intron (NM_008074, intron 5 of 9)	485821	NM_008074	14407	Mm.434343	NM_008074		Gabrg3	B230362M20Rik|Gabrg-3	gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3	protein-coding
unique_peak2-36516-7-9--0.522837264589173-1.05908390183068	chr2	158515309	158515728	+	0	NA	intron (NM_001159662, intron 1 of 10)	intron (NM_001159662, intron 1 of 10)	22647	NM_001159662	228852	Mm.150540	NM_153089	ENSMUSG00000037754	Ppp1r16b	ANKRD4|C130078N17Rik|TIMAP|Wdt4	protein phosphatase 1, regulatory (inhibitor) subunit 16B	protein-coding
common_peak2-29966-16-18--0.129663871175524-0.307235046933848	chr6	119333552	119334144	+	0	NA	intron (NM_197985, intron 1 of 7)	intron (NM_197985, intron 1 of 7)	33653	NM_197985	68465	Mm.291826	NM_197985	ENSMUSG00000030168	Adipor2	1110001I14Rik|ADCR2|AI115388|AW554121|D6Ucla1e|Paqr2	adiponectin receptor 2	protein-coding
common_peak1-12336-25-47--0.72311259537605-1.23561791483487	chr17	53689139	53690251	+	0	NA	Intergenic	LTRIS5|LTR|ERV1	-10919	NM_173449	110332	Mm.444633	NM_173449	ENSMUSG00000044957	Pp2d1	4921523A10Rik	protein phosphatase 2C-like domain containing 1	protein-coding
unique_peak2-39193-1-6--2.43441193227435-1.56314192529759	chr8	104359711	104360033	+	0	NA	Intergenic	ORR1A2|LTR|MaLR	949139	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
common_peak1-15413-23-24-0.0779113147343562-0.318406410381916	chr4	86748563	86749538	+	0	NA	intron (NM_172426, intron 2 of 10)	intron (NM_172426, intron 2 of 10)	124817	NM_001110240	76376	Mm.490487	NM_172426	ENSMUSG00000037996	Slc24a2	2810021B17Rik|6330417K15Rik|AI847460|Nckx2	solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	protein-coding
unique_peak2-35543-1-6--2.43441193227435-1.56314192529759	chr17	56997339	56997671	+	0	NA	intron (NM_001039114, intron 6 of 14)	intron (NM_001039114, intron 6 of 14)	16365	NM_001039114	328845	Mm.179421	NM_001039114	ENSMUSG00000024207	Acsbg2	Bgr	acyl-CoA synthetase bubblegum family member 2	protein-coding
unique_peak1-3651-29-4-2.79036198572775-6.44030167009728	chr19	38625647	38626891	+	0	NA	intron (NM_019588, intron 1 of 31)	intron (NM_019588, intron 1 of 31)	27582	NM_019588	74055	Mm.34031	NM_019588	ENSMUSG00000024998	Plce1	4933403A21Rik|PLCepsilon|Plce|mKIAA1516	phospholipase C, epsilon 1	protein-coding
common_peak2-29573-8-7-0.00522241794757061-1.00793137938329	chr6	47830204	47830562	+	0	NA	exon (NM_146175, exon 2 of 8)	exon (NM_146175, exon 2 of 8)	2829	NM_146175	101095	Mm.440186	NM_146175	ENSMUSG00000025821	Zfp282	AI449432|C81429|E430019K09Rik|HUB1	zinc finger protein 282	protein-coding
common_peak2-32331-15-31--0.987835249444344-1.35897270024963	chrX	74244320	74245530	+	0	NA	Intergenic	B4A|SINE|B4	-396662	NM_001201395	74987	Mm.107996	NM_001201395	ENSMUSG00000079525	4930468A15Rik	-	RIKEN cDNA 4930468A15 gene	protein-coding
common_peak2-28592-12-17--0.521149016354673-0.417187467413082	chr5	20882478	20882939	+	0	NA	3' UTR (NM_008013, exon 2 of 2)	3' UTR (NM_008013, exon 2 of 2)	4217	NM_008013	14190	Mm.292100	NM_008013	ENSMUSG00000039899	Fgl2	AI385601|musfiblp	fibrinogen-like protein 2	protein-coding
common_peak2-20743-77-165--0.590512851790927-2.70583416263578	chr10	111009302	111010622	+	0	NA	Intergenic	Intergenic	21367	NR_045344	71321	Mm.410785	NR_045344	ENSMUSG00000097082	4933440J02Rik	-	RIKEN cDNA 4933440J02 gene	ncRNA
common_peak2-25576-38-31-0.57145265929853-1.10165134406427	chr19	6987061	6987973	+	0	NA	intron (NM_007953, intron 4 of 6)	intron (NM_007953, intron 4 of 6)	1259	NR_105956	102466213		NR_105956		Mir6990	mmu-mir-6990	microRNA mir-6990	ncRNA
unique_peak2-36982-4-7--1.02346051385325-1.09384600808989	chr3	117067725	117068197	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-4167	NM_177664	229791	Mm.140138	NM_177664	ENSMUSG00000044667	Lppr4	A330086D10|D3Bwg0562e|PRG-1|mKIAA0455	lipid phosphate phosphatase-related protein type 4	protein-coding
unique_peak1-1147-11-4-1.18676548936425-1.68134727924692	chr11	97818443	97819022	+	0	NA	intron (NM_001163608, intron 2 of 13)	intron (NM_001163608, intron 2 of 13)	29028	NM_028199	72324	Mm.39617	NM_028199	ENSMUSG00000017417	Plxdc1	2410003I07Rik|AI848450|Tem7	plexin domain containing 1	protein-coding
unique_peak1-2614-7-4-0.477162735410827-1.09384600808989	chr16	34673080	34673515	+	0	NA	intron (NM_030744, intron 4 of 5)	intron (NM_030744, intron 4 of 5)	-17405	NM_172824	239839	Mm.272045	NM_172824	ENSMUSG00000022833	Ccdc14	G630039H03Rik	coiled-coil domain containing 14	protein-coding
unique_peak1-3364-14-3-1.89921616035764-2.80787975886178	chr19	47561986	47562779	+	0	NA	Intergenic	Intergenic	-23481	NM_008018	14218	Mm.127560	NM_008018	ENSMUSG00000053617	Sh3pxd2a	2310014D11Rik|AA589508|AI256723|AI413738|C230050L11|EG329070|Fish|Gm5098|Sh3md1|TSK5|Tks5	SH3 and PX domains 2A	protein-coding
unique_peak1-5991-10-3-1.35641534500877-1.75805390616669	chr6	99302413	99303012	+	0	NA	intron (NM_053202, intron 1 of 18)	intron (NM_053202, intron 1 of 18)	82627	NM_053202	108655	Mm.234965	NM_053202	ENSMUSG00000030067	Foxp1	3110052D19Rik|4932443N09Rik|AI461938|AW494214	forkhead box P1	protein-coding
common_peak1-11772-11-15--0.491306415748387-0.435191258261915	chr16	44724040	44724526	+	0	NA	promoter-TSS (NM_145972)	promoter-TSS (NM_145972)	-131	NM_145972	212547	Mm.310573	NM_145972	ENSMUSG00000036208	BC027231	Nepro	cDNA sequence BC027231	protein-coding
unique_peak2-33425-2-5--1.50241675698448-1.08602067057793	chr11	60243110	60243476	+	0	NA	intron (NM_025757, intron 2 of 5)	B1_Mur1|SINE|Alu	12646	NM_025757	66771	Mm.29950	NM_025757	ENSMUSG00000018415	Gid4	4933439F18Rik	GID complex subunit 4, VID24 homolog (S. cerevisiae)	protein-coding
common_peak1-17530-9-6-0.382258484346616-1.11707584880836	chr7	28571527	28572007	+	0	NA	Intergenic	RLTR13D3|LTR|ERVK	21075	NR_033484	100043229	Mm.458666	NR_033484		Gm10046	ENSMUSG00000058661	predicted gene 10046	ncRNA
unique_peak2-35237-13-39--1.54345606424959-2.96631085054194	chr16	92697158	92698307	+	0	NA	promoter-TSS (NM_009821)	promoter-TSS (NM_009821)	-158	NM_009821	12394	Mm.4081	NM_009821	ENSMUSG00000022952	Runx1	AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b	runt related transcription factor 1	protein-coding
common_peak2-24996-27-44--0.500307145434439-0.714193724415661	chr18	11052476	11053331	+	0	NA	promoter-TSS (NR_105023)	promoter-TSS (NR_105023)	-338	NR_105023	68434	Mm.57626	NR_105022	ENSMUSG00000097222	1010001N08Rik	-	RIKEN cDNA 1010001N08 gene	ncRNA
common_peak2-22531-19-28--0.455293668465885-0.518921928796332	chr13	55512202	55513398	+	0	NA	intron (NM_011392, intron 10 of 12)	intron (NM_011392, intron 10 of 12)	3793	NM_029303	75477	Mm.432537	NM_029303		Pfn3	1700012P12Rik	profilin 3	protein-coding
unique_peak2-33289-3-7--1.41398308995928-1.23214870625617	chr11	76496648	76497114	+	0	NA	intron (NM_177709, intron 1 of 2)	B2_Mm2|SINE|B2	3506	NM_177709	237858	Mm.127006	NM_177709	ENSMUSG00000046275	Tusc5	C130069F04Rik|DSPB1|Lost1	tumor suppressor candidate 5	protein-coding
common_peak2-20934-7-8--0.370834171144123-1.00793137938329	chr11	8473082	8473478	+	0	NA	intron (NM_001083587, intron 4 of 30)	intron (NM_001083587, intron 4 of 30)	91258	NM_001083587	319939	Mm.337820	NM_001083587	ENSMUSG00000020422	Tns3	BC023928|F830010I22Rik|TEM6|Tens1	tensin 3	protein-coding
unique_peak1-4141-15-5-1.4272022498345-1.61682445937017	chr2	92771937	92772623	+	0	NA	intron (NM_030725, intron 1 of 5)	intron (NM_030725, intron 1 of 5)	17022	NM_030725	80976	Mm.33490	NM_030725	ENSMUSG00000027220	Syt13	5730409J20Rik|AI549909|mKIAA1427	synaptotagmin XIII	protein-coding
common_peak2-24219-15-16--0.075298090694683-0.301029995663976	chr16	78576221	78576949	+	0	NA	5' UTR (NM_001252438, exon 1 of 5)	5' UTR (NM_001252438, exon 1 of 5)	348	NM_001252438	67102	Mm.37332	NM_025967		D16Ertd472e	1700010I10Rik|2310009O17Rik|E330003K22Rik|Eurl	DNA segment, Chr 16, ERATO Doi 472, expressed	protein-coding
common_peak2-28961-7-5-0.214128329577033-1.01466476204226	chr5	103731485	103731849	+	0	NA	Intergenic	Intergenic	-3619	NR_040699	74624	Mm.389662	NR_040699		4930429D17Rik	-	RIKEN cDNA 4930429D17 gene	ncRNA
unique_peak2-35641-3-5--0.998945590680433-0.96108193396963	chr17	88597182	88597512	+	0	NA	Intergenic	Intergenic	72495	NM_001190356	225058	Mm.312053	NM_001190356		Gm4832	EG225058	predicted gene 4832	protein-coding
unique_peak1-7266-12-4-1.32684789020028-2.04196296489515	chr9	96119364	96119987	+	0	NA	intron (NM_178667, intron 2 of 13)	intron (NM_178667, intron 2 of 13)	22981	NM_001184706	211586	Mm.17977	NM_178667	ENSMUSG00000032411	Tfdp2	1110029I05Rik|A330080J22Rik|DP-3|DP3	transcription factor Dp 2	protein-coding
common_peak1-19303-34-29-0.475177931392747-0.820829064533854	chr9	121759484	121760435	+	0	NA	intron (NM_019814, intron 2 of 3)	RSINE1|SINE|B4	7159	NM_019814	56295	Mm.347915	NM_019814	ENSMUSG00000038412	Higd1a	2210020B17Rik|7420700H20Rik|AI303276|AW049839|HIMP1|Hig1	HIG1 domain family, member 1A	protein-coding
unique_peak2-37570-9-19--1.13231468848314-1.09394599973099	chr5	34535243	34536073	+	0	NA	Intergenic	Intergenic	-5299	NM_010753	17122	Mm.259260	NM_010753	ENSMUSG00000037235	Mxd4	2810410A03Rik|Mad4|bHLHc12	Max dimerization protein 4	protein-coding
common_peak2-25971-22-22-0.123722149030391-0.342639663781856	chr19	53412144	53413008	+	0	NA	intron (NM_010847, intron 2 of 5)	Lx8|LINE|L1	7640	NM_001008543	17859	Mm.2154	NM_010847	ENSMUSG00000025025	Mxi1	ENSMUSG00000067085|Gm10197|Mad2|bHLHc11	Max interacting protein 1	protein-coding
unique_peak2-38357-7-9--0.522837264589173-1.05908390183068	chr7	3693080	3693694	+	0	NA	intron (NM_001289428, intron 12 of 12)	intron (NM_001289428, intron 12 of 12)	-21403	NM_011095	18733	Mm.326531	NM_011095		Pirb	Gp91|LIR-3|Lilrb3|PIR-B	paired Ig-like receptor B	protein-coding
common_peak2-27518-15-32--1.0322293688028-1.48160942223867	chr3	95667300	95668244	+	0	NA	intron (NM_078479, intron 1 of 1)	intron (NM_078479, intron 1 of 1)	6770	NM_078479	66292	Mm.24108	NM_078479	ENSMUSG00000054312	Mrps21	1810031B19Rik	mitochondrial ribosomal protein S21	protein-coding
unique_peak1-291-8-2-1.42025991722641-1.65811743852845	chr1	121464001	121464496	+	0	NA	intron (NM_145506, intron 20 of 24)	intron (NM_145506, intron 20 of 24)	41517	NM_146103	226351	Mm.439806	NM_146103	ENSMUSG00000098923	Tmem185b	2500001K11Rik	transmembrane protein 185B	protein-coding
common_peak1-17119-13-12-0.0780323124966764-0.334470287753051	chr6	115318999	115319708	+	0	NA	intron (NM_001127330, intron 1 of 7)	intron (NM_001127330, intron 1 of 7)	8114	NM_001127330	19016	Mm.3020	NM_011146	ENSMUSG00000000440	Pparg	Nr1c3|PPAR-gamma|PPAR-gamma2|PPARgamma|PPARgamma2	peroxisome proliferator activated receptor gamma	protein-coding
common_peak2-19731-17-17-0.0483713367627256-0.325169893479371	chr1	72465708	72466404	+	0	NA	Intergenic	Intergenic	112061	NM_009533	22596	Mm.246952	NM_009533	ENSMUSG00000026187	Xrcc5	AI314015|Ku80|Ku86	X-ray repair complementing defective repair in Chinese hamster cells 5	protein-coding
common_peak2-24382-43-25-1.08212346738261-2.80467882841136	chr17	12195130	12196367	+	0	NA	intron (NM_016694, intron 9 of 11)	MTA_Mm|LTR|MaLR	-116402	NM_026644	68262	Mm.258300	NM_026644	ENSMUSG00000023827	Agpat4	1500003P24Rik	1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)	protein-coding
unique_peak2-34944-10-13--0.450939577048835-0.386243247519795	chr15	89314595	89315253	+	0	NA	non-coding (NR_077233, exon 5 of 5)	non-coding (NR_077233, exon 5 of 5)	-7069	NM_009713	11883	Mm.620	NM_009713	ENSMUSG00000022620	Arsa	AS-A|ASA|AW212749|As-2|As2|TISP73	arylsulfatase A	protein-coding
unique_peak1-6180-63-2-4.85335009034943-22.9372239875088	chr6	145933702	145934973	+	0	NA	Intergenic	L2b|LINE|L2	51670	NM_010656	16651	Mm.49689	NM_010656	ENSMUSG00000030255	Sspn	Krag	sarcospan	protein-coding
unique_peak2-39503-11-16--0.578769256998726-0.503257505534083	chr9	62819835	62820484	+	0	NA	intron (NM_019663, intron 1 of 13)	intron (NM_019663, intron 1 of 13)	8527	NM_019663	56469	Mm.431253	NM_019663	ENSMUSG00000032405	Pias1	2900068C24Rik|Ddxbp1|GBP	protein inhibitor of activated STAT 1	protein-coding
common_peak2-31128-22-15-0.647284105087405-0.849699271740893	chr8	34287397	34288020	+	0	NA	Intergenic	L1Md_F2|LINE|L1	208291	NM_001122822	22427	Mm.228805	NM_011721	ENSMUSG00000031583	Wrn	AI846146	Werner syndrome homolog (human)	protein-coding
common_peak1-9602-38-24-0.927596469523806-2.07189913552604	chr11	120250666	120252370	+	0	NA	intron (NM_199469, intron 12 of 15)	intron (NM_199469, intron 12 of 15)	-11458	NM_027980	71885	Mm.274890	NM_027980	ENSMUSG00000025384	2310003H01Rik	Faap100	RIKEN cDNA 2310003H01 gene	protein-coding
common_peak2-30600-27-57--0.866435044232336-1.84665509793009	chr7	81828374	81830044	+	0	NA	Intergenic	Intergenic	-129543	NM_001038643	108116	Mm.425467	NM_023908	ENSMUSG00000025790	Slco3a1	5830414C08Rik|Anr1|MJAM|OATP-D|R75096|Slc21a11	solute carrier organic anion transporter family, member 3a1	protein-coding
unique_peak1-1126-10-4-1.03448725012141-1.5150158574804	chr11	95078962	95079540	+	0	NA	Intergenic	CT-rich|Low_complexity|Low_complexity	-43592	NM_053093	93670	Mm.40085	NM_053093	ENSMUSG00000020872	Tac4	AW489379|PPT-C	tachykinin 4	protein-coding
common_peak2-21896-6-7--0.434601889619698-0.97990265578305	chr12	4188429	4188825	+	0	NA	intron (NM_001159536, intron 3 of 21)	intron (NM_001159536, intron 3 of 21)	-45400	NM_001204912	69709	Mm.250552	NM_001204912	ENSMUSG00000096199	Ptrhd1	2410017P09Rik	peptidyl-tRNA hydrolase domain containing 1	protein-coding
common_peak1-12614-38-54--0.20990705422613-0.377714458142987	chr18	31803960	31805014	+	0	NA	intron (NM_172965, intron 2 of 20)	Lx7|LINE|L1	10450	NM_172965	269003	Mm.194538	NM_172965	ENSMUSG00000024260	Sap130	2610304F09Rik|6720406D06	Sin3A associated protein	protein-coding
unique_peak1-7063-8-2-1.42025991722641-1.65811743852845	chr9	13450237	13450706	+	0	NA	intron (NM_001013813, intron 1 of 3)	intron (NM_001013813, intron 1 of 3)	-16433	NM_173776	270118	Mm.116898	NM_173776	ENSMUSG00000031925	Maml2	5930431H10|BC032967	mastermind like 2 (Drosophila)	protein-coding
common_peak1-8436-42-11-2.15736682714603-7.03319409921793	chr10	78297400	78298821	+	0	NA	Intergenic	MTE2a|LTR|MaLR	12548	NM_146308	258305	Mm.377425	NM_146308	ENSMUSG00000051190	Olfr1356	MOR142-1|MOR142-2_p	olfactory receptor 1356	protein-coding
unique_peak2-33040-3-11--1.99894559068043-1.95434855131066	chr10	71344446	71344852	+	0	NA	Intergenic	Intergenic	98789	NR_003644	108950	Mm.212793	NM_175390	ENSMUSG00000043859	1700049L16Rik	-	hematological and neurological expressed 1-like pseudogene	pseudo
common_peak1-7850-57-39-0.944104945191566-3.05468825467783	chr1	132150088	132151923	+	0	NA	Intergenic	L1Md_F2|LINE|L1	168571	NM_007827	13137	Mm.436759	NM_007827	ENSMUSG00000026401	Daf2	AI323748|Cd55b|Daf|Daf-TM|TM-DAF	decay accelerating factor 2	protein-coding
common_peak2-26942-12-11-0.0638134843664826-0.337263207250336	chr2	164456756	164457277	+	0	NA	Intergenic	L1VL4|LINE|L1	7286	NM_001012723	277345	Mm.247244	NM_001012723	ENSMUSG00000070530	Wfdc16	BC043944|WAP16	WAP four-disulfide core domain 16	protein-coding
unique_peak2-33093-6-7--0.434601889619698-0.97990265578305	chr10	80226614	80227089	+	0	NA	intron (NM_199322, intron 1 of 27)	intron (NM_199322, intron 1 of 27)	8900	NM_199322	208266	Mm.152371	NM_199322	ENSMUSG00000061589	Dot1l	A630076O07|AW907654|Dot1|KMT4|mDot1	DOT1-like, histone H3 methyltransferase (S. cerevisiae)	protein-coding
common_peak1-16006-127-131-0.606992391969603-3.53009203878905	chr5	34335360	34337671	+	0	NA	Intergenic	ETnERV2-int|LTR|ERVK	-2118	NM_001001985	269642	Mm.274610	NM_001001985	ENSMUSG00000048142	Nat8l	1110038O08Rik|Shati	N-acetyltransferase 8-like	protein-coding
common_peak2-20992-20-14-0.581184188982674-0.690311289528838	chr11	22972059	22972845	+	0	NA	Intergenic	B3|SINE|B2	59065	NM_028672	73873	Mm.252406	NM_028672	ENSMUSG00000049811	Fam161a	4930430E16Rik	family with sequence similarity 161, member A	protein-coding
unique_peak2-39665-10-15--0.643584654991231-0.519648556297791	chr9	107580434	107581134	+	0	NA	intron (NM_008140, intron 1 of 8)	intron (NM_008140, intron 1 of 8)	1139	NM_008140	14685	Mm.284853	NM_008140	ENSMUSG00000034837	Gnat1	Gnat-1|Ird1|Ird2|Tralpha|irdc|irdr|transducin	guanine nucleotide binding protein, alpha transducing 1	protein-coding
unique_peak2-33649-7-16--1.28837201095215-1.08658567012551	chr11	99076088	99076749	+	0	NA	intron (NM_020618, intron 8 of 10)	intron (NM_020618, intron 8 of 10)	15913	NM_020618	57376	Mm.379086	NM_020618	ENSMUSG00000037935	Smarce1	2810417B20Rik|5830412H02Rik|9030408N19Rik|Baf27	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	protein-coding
common_peak1-16668-61-45-0.859187373692327-2.78803811283105	chr6	146701567	146703415	+	0	NA	intron (NM_172734, intron 1 of 13)	intron (NM_172734, intron 1 of 13)	29039	NM_172734	232533	Mm.322121	NM_172734	ENSMUSG00000001630	Stk38l	4930473A22Rik|B230328I19|Ndr2|Ndr54	serine/threonine kinase 38 like	protein-coding
common_peak1-13069-32-27-0.471737097162056-0.777451270049544	chr19	6276865	6277872	+	0	NA	exon (NM_010119, exon 1 of 5)	exon (NM_010119, exon 1 of 5)	472	NM_010119	13660	Mm.30169	NM_010119	ENSMUSG00000024772	Ehd1	AA409636|Past1|RME-1	EH-domain containing 1	protein-coding
common_peak1-17973-52-59-0.20136939465718-0.470849273483586	chr7	132930858	132932071	+	0	NA	intron (NM_001081022, intron 6 of 27)	intron (NM_001081022, intron 6 of 27)	80074	NM_001081022	233865	Mm.274389	NM_001081022	ENSMUSG00000032743	D430042O09Rik	Kiaa0556	RIKEN cDNA D430042O09 gene	protein-coding
unique_peak2-39061-7-16--1.28837201095215-1.08658567012551	chr8	71485610	71486076	+	0	NA	Intergenic	Intergenic	81389	NM_008509	16956	Mm.1514	NM_008509	ENSMUSG00000015568	Lpl	-	lipoprotein lipase	protein-coding
common_peak2-31960-9-15--0.81038659359578-0.630231561310125	chr9	65884512	65885169	+	0	NA	intron (NM_173185, intron 13 of 13)	intron (NM_173185, intron 13 of 13)	-23136	NM_011149	19035	Mm.335249	NM_011149	ENSMUSG00000032383	Ppib	AA408962|AA553318|AI844835|Cphn-2|Cphn2|CyP-20b	peptidylprolyl isomerase B	protein-coding
unique_peak2-35304-5-5--0.289342836727009-0.909929411522249	chr17	12940607	12940988	+	0	NA	intron (NR_027773, intron 1 of 2)	B3|SINE|B2	6620	NR_027784	104103	Mm.26553	NR_002853	ENSMUSG00000078247	Airn	2810051F02Rik|2810434M15Rik|AI256653|AI597500|AW049873|Air|B930018I07Rik|D17Ertd663e|IGF2RAS	antisense Igf2r RNA	ncRNA
common_peak1-18332-11-16--0.578769256998726-0.503257505534083	chr8	61270162	61270620	+	0	NA	intron (NM_175032, intron 1 of 11)	intron (NM_175032, intron 1 of 11)	-90798	NM_001177534	100271928	Mm.484123	NM_001177534		Gm15881	OTTMUSG00000027193	predicted gene 15881	protein-coding
common_peak2-25186-11-8-0.338768582809301-1.14218153353838	chr18	57685317	57685631	+	0	NA	intron (NR_015541, intron 1 of 1)	intron (NR_015541, intron 1 of 1)	7932	NR_015541	74916	Mm.444721	NR_015541	ENSMUSG00000085800	1700066O22Rik	4930500F21Rik|4930515O13Rik|4930542C11Rik	RIKEN cDNA 1700066O22 gene	ncRNA
common_peak1-16505-21-27--0.237865656791368-0.339372226903478	chr5	139479253	139480104	+	0	NA	Intergenic	Intergenic	-8771	NM_008808	18590	Mm.2675	NM_008808	ENSMUSG00000025856	Pdgfa	-	platelet derived growth factor, alpha	protein-coding
unique_peak2-35528-3-7--1.41398308995928-1.23214870625617	chr17	51812679	51813131	+	0	NA	Intergenic	Intergenic	138474	NM_001163630	20230	Mm.311655	NM_009122	ENSMUSG00000023927	Satb1	2610306G12Rik|AW413156	special AT-rich sequence binding protein 1	protein-coding
common_peak1-14564-9-15--0.81038659359578-0.630231561310125	chr3	37204157	37204634	+	0	NA	Intergenic	Intergenic	6973	NM_145825	207175	Mm.344708	NM_145825	ENSMUSG00000045031	Cetn4	-	centrin 4	protein-coding
unique_peak2-39780-3-9--1.73591118484664-1.57096726280955	chrX	8206142	8206596	+	0	NA	Intergenic	Lx3_Mus|LINE|L1	-39997	NM_198898	278174	Mm.379565	NM_198898	ENSMUSG00000079701	Ssxb3	-	synovial sarcoma, X member B, breakpoint 3	protein-coding
unique_peak1-5113-14-7-0.899216160357645-0.947446088118041	chr4	156077478	156078191	+	0	NA	Intergenic	Intergenic	-468868	NM_198305	231003	Mm.423038	NM_198305	ENSMUSG00000078484	Klhl17	AL022703|BC058738	kelch-like 17	protein-coding
common_peak1-12673-19-26--0.352200175501782-0.416752705545949	chr18	36743994	36744822	+	0	NA	intron (NM_175375, intron 5 of 33)	intron (NM_175375, intron 5 of 33)	24151	NM_175375	108857	Mm.482287	NM_175375	ENSMUSG00000024483	Ankhd1	1110004O12Rik|4933432B13Rik|9130019P20Rik|A530027J04Rik|A630021B20Rik|AA571404|Mask|mFLJ00246|mKIAA1085	ankyrin repeat and KH domain containing 1	protein-coding
common_peak2-29175-23-21-0.262335885871783-0.416752705545949	chr5	134675497	134676279	+	0	NA	intron (NM_053266, intron 6 of 15)	B3|SINE|B2	15980	NM_053266	114674	Mm.218744	NM_053266	ENSMUSG00000015942	Gtf2ird2	1700012P16Rik	GTF2I repeat domain containing 2	protein-coding
common_peak1-15835-46-56-0.0651059290840603-0.330987277729095	chr5	138116217	138117714	+	0	NA	intron (NM_145566, intron 1 of 4)	B2_Mm2|SINE|B2	8880	NM_178162	231801	Mm.260869	NM_145566	ENSMUSG00000029722	Agfg2	A630095P14Rik|Hrbl|RABR	ArfGAP with FG repeats 2	protein-coding
unique_peak2-38884-4-7--1.02346051385325-1.09384600808989	chr8	4226564	4226947	+	0	NA	promoter-TSS (NM_028175)	promoter-TSS (NM_028175)	-72	NM_028175	72267	Mm.25479	NM_028175	ENSMUSG00000046589	Lrrc8e	1810049O03Rik|C87354	leucine rich repeat containing 8 family, member E	protein-coding
unique_peak1-5681-15-0-4.01216475055566-5.11750992628768	chr6	32377472	32378291	+	0	NA	intron (NM_175750, intron 3 of 31)	intron (NM_175750, intron 3 of 31)	-83260	NR_040277	319849	Mm.440860	NR_040277	ENSMUSG00000086763	Plxna4os1	B230378P21Rik	plexin A4, opposite strand 1	ncRNA
unique_peak2-34080-8-12--0.695217300193522-0.475924844171029	chr13	6108847	6109423	+	0	NA	Intergenic	MTE-int|LTR|MaLR	248400	NM_011803	23849	Mm.275036	NM_011803	ENSMUSG00000000078	Klf6	AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9	Kruppel-like factor 6	protein-coding
common_peak1-15090-9-16--0.897849434846119-0.732381977911291	chr3	129724836	129725361	+	0	NA	intron (NM_207209, intron 3 of 23)	intron (NM_207209, intron 3 of 23)	38727	NM_207209	99683	Mm.192303	NM_207209	ENSMUSG00000001052	Sec24b	AI605202|SEC24	Sec24 related gene family, member B (S. cerevisiae)	protein-coding
common_peak1-17277-9-16--0.897849434846119-0.732381977911291	chr6	135067077	135067605	+	0	NA	intron (NM_001205396, intron 1 of 3)	intron (NM_001205396, intron 1 of 3)	960	NM_053118	93746	Mm.49902	NM_053118	ENSMUSG00000030205	Gprc5d	-	G protein-coupled receptor, family C, group 5, member D	protein-coding
common_peak1-13715-33-18-1.08341004908194-2.15925086250253	chr2	30743492	30744716	+	0	NA	TTS (NM_022415)	TTS (NM_022415)	14713	NM_022415	64292	Mm.28768	NM_022415	ENSMUSG00000050737	Ptges	2410099E23Rik|D2Ertd369e|Pges|mPGES|mPGES-1	prostaglandin E synthase	protein-coding
unique_peak2-37622-7-6--0.00826409175941478-0.97990265578305	chr5	66099791	66100352	+	0	NA	Intergenic	Intergenic	-10976	NM_001081321	71521	Mm.278974	NM_027818	ENSMUSG00000029202	Pds5a	9030416H16Rik|E230024D05Rik|mKIAA0648	PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	protein-coding
common_peak2-24888-9-9--0.132314688483142-1.03275496310833	chr17	84025787	84026292	+	0	NA	intron (NM_153512, intron 1 of 1)	intron (NM_153512, intron 1 of 1)	5196	NM_153512	225030	Mm.223506	NM_153512	ENSMUSG00000045053	Kcng3	KV6.3|Kv10.1a|Kv10.1b	potassium voltage-gated channel, subfamily G, member 3	protein-coding
common_peak1-12847-36-25-0.778881368026663-1.55933022783608	chr18	73835188	73836642	+	0	NA	intron (NM_008540, intron 2 of 11)	MER21B|LTR|ERV1	27480	NM_008540	17128	Mm.100399	NM_008540	ENSMUSG00000024515	Smad4	AW743858|D18Wsu70e|DPC4|Madh4	SMAD family member 4	protein-coding
common_peak1-13655-57-72-0.0762084811989112-0.337470937500802	chr2	26910389	26911902	+	0	NA	Intergenic	Intergenic	12243	NM_001159602	66139	Mm.330087	NM_025376	ENSMUSG00000009214	Tmem8c	1110002H13Rik|AI131587	transmembrane protein 8C	protein-coding
common_peak2-32027-6-4-0.24347001549294-0.989110657569874	chr9	76004125	76004426	+	0	NA	Intergenic	L1_Mus4|LINE|L1	57189	NM_205844	404194	Mm.213862	NM_205844	ENSMUSG00000059383	Gfral	AY457637|Gral	GDNF family receptor alpha like	protein-coding
common_peak1-17687-108-177--0.105556469558328-0.392479182881626	chr7	67371733	67373984	+	0	NA	Intergenic	Lx3_Mus|LINE|L1	-87753	NM_001082962	20646	Mm.274995	NM_013670	ENSMUSG00000000948	Snrpn	2410045I01Rik|HCERN3|Peg4|Pwcr1|SMN	small nuclear ribonucleoprotein N	protein-coding
unique_peak2-39181-7-10--0.660340788339108-1.12966497611638	chr8	95145501	95146057	+	0	NA	Intergenic	Intergenic	-52409	NM_022428	64379	Mm.137247	NM_022428		Irx6	-	Iroquois related homeobox 6 (Drosophila)	protein-coding
common_peak1-14642-45-40-0.502806020726788-1.02303743263849	chr3	57289145	57290274	+	0	NA	intron (NM_133784, intron 3 of 6)	intron (NM_133784, intron 3 of 6)	60377	NM_145539	229302	Mm.26618	NM_145539	ENSMUSG00000027801	Tm4sf4	Iltmp	transmembrane 4 superfamily member 4	protein-coding
common_peak2-29712-95-107-0.393027842860546-1.37287060386843	chr6	83455708	83457458	+	0	NA	intron (NM_001162521, intron 1 of 5)	intron (NM_001162521, intron 1 of 5)	380	NM_013764	27369	Mm.42234	NM_013764	ENSMUSG00000014554	Dguok	dGK|dGK1|dGK2|dGK3	deoxyguanosine kinase	protein-coding
common_peak1-18108-21-13-0.762134343208631-1.0220094258199	chr8	3414315	3415340	+	0	NA	intron (NM_133962, intron 1 of 19)	B3A|SINE|B2	21819	NM_133962	102098	Mm.170461	NM_133962	ENSMUSG00000004568	Arhgef18	AI467246|D030053O22Rik	rho/rac guanine nucleotide exchange factor (GEF) 18	protein-coding
common_peak1-11129-16-12-0.417823924126969-0.489164546851866	chr15	66843074	66843992	+	0	NA	Intergenic	Intergenic	-42330	NM_008681	17988	Mm.30837	NM_008681	ENSMUSG00000005125	Ndrg1	CAP43|CMT4D|DRG1|HMSNL|NMSL|Ndr1|Ndrl|PROXY1|RTP|TDD5	N-myc downstream regulated gene 1	protein-coding
common_peak2-24404-93-224--0.702711327710769-4.78025592324228	chr17	14991942	14993652	+	0	NA	intron (NM_175173, intron 23 of 24)	L1_Mur3|LINE|L1	87332	NM_175173	71682	Mm.122698	NM_175173	ENSMUSG00000046991	Wdr27	0610012K18Rik	WD repeat domain 27	protein-coding
unique_peak1-6621-19-6-1.59533240460408-2.21753093801298	chr8	4838013	4838813	+	0	NA	Intergenic	Intergenic	-58879	NM_011369	20419	Mm.37801	NM_011369	ENSMUSG00000022322	Shcbp1	mPAL	Shc SH2-domain binding protein 1	protein-coding
unique_peak2-39818-3-5--0.998945590680433-0.96108193396963	chrX	36989299	36989710	+	0	NA	Intergenic	L1Md_F|LINE|L1	227277	NM_001191032	100504400	Mm.373409	NM_001191032	ENSMUSG00000095240	Cypt14	-	cysteine-rich perinuclear theca 14	protein-coding
common_peak1-15508-10-15--0.643584654991231-0.519648556297791	chr4	116651120	116651820	+	0	NA	intron (NM_001029912, intron 8 of 13)	B1_Mm|SINE|Alu	15510	NM_009478	22275	Mm.46484	NM_009478	ENSMUSG00000028684	Urod	AI323803|Uro-d	uroporphyrinogen decarboxylase	protein-coding
common_peak2-20230-92-125-0.115072160202848-0.401729613028376	chr1	181210596	181212854	+	0	NA	intron (NM_027188, intron 5 of 11)	intron (NM_027188, intron 5 of 11)	236409	NM_027188	69726	Mm.222338	NM_027188		Smyd3	2410008A19Rik|Zmynd1	SET and MYND domain containing 3	protein-coding
unique_peak2-39142-8-24--1.63863377182715-2.11898024768848	chr8	86317610	86318560	+	0	NA	Intergenic	Intergenic	-52875	NM_001163031	26364	Mm.334648	NM_011925	ENSMUSG00000002885	Cd97	AA409984|TM7LN1	CD97 antigen	protein-coding
common_peak2-30989-30-39--0.15225268539549-0.327094617740873	chr8	4237900	4239394	+	0	NA	promoter-TSS (NM_011944)	promoter-TSS (NM_011944)	-93	NM_011944	26400	Mm.3906	NM_011944	ENSMUSG00000002948	Map2k7	5930412N11Rik|JNKK 2|Jnkk2|MAPKK 7|MEK 7|Mapkk7|Mek7|Mkk7|Prkmk7|sek2	mitogen-activated protein kinase kinase 7	protein-coding
common_peak1-11631-36-32-0.434926966809301-0.779916249636873	chr16	20732213	20733531	+	0	NA	promoter-TSS (NM_009893)	promoter-TSS (NM_009893)	-328	NM_001278041	12667	Mm.20457	NM_009893	ENSMUSG00000006958	Chrd	Chd	chordin	protein-coding
common_peak2-29909-31-37--0.0226888426304619-0.301029995663945	chr6	114874373	114875728	+	0	NA	Intergenic	Intergenic	-3280	NM_177683	232334	Mm.268357	NM_177683		Vgll4	BC048841|VGL-4	vestigial like 4 (Drosophila)	protein-coding
common_peak1-11153-14-29--1.00767443525087-1.28534286439185	chr15	74967502	74968261	+	0	NA	Intergenic	Intergenic	-25502	NM_001099217	100041546	Mm.482110	NM_001099217	ENSMUSG00000022584	Ly6c2	Ly-6C.2|Ly-6C2	lymphocyte antigen 6 complex, locus C2	protein-coding
common_peak1-14537-37-58--0.356649977876023-0.602366141647657	chr3	30968184	30969581	+	0	NA	Intergenic	Intergenic	-25098	NM_011386	20482	Mm.15406	NM_011386	ENSMUSG00000027660	Skil	Skir|SnoN|sno	SKI-like	protein-coding
common_peak1-15730-15-6-1.20480982849805-1.32521814697968	chr4	144949496	144950074	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-44735	NM_009401	21941	Mm.12810	NM_009401	ENSMUSG00000028602	Tnfrsf8	Cd30|D1S166E|Ki|Ki-1	tumor necrosis factor receptor superfamily, member 8	protein-coding
common_peak1-17711-19-18-0.154759813218101-0.351190433797598	chr7	79278434	79279416	+	0	NA	intron (NM_001024703, intron 17 of 22)	intron (NM_001024703, intron 17 of 22)	172556	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding
unique_peak1-4720-8-1-2.00522241794757-2.05605744720049	chr3	104519044	104519525	+	0	NA	Intergenic	MLT1A1|LTR|MaLR	61181	NM_183224	329731	Mm.389494	NM_183224	ENSMUSG00000055865	Fam19a3	7530404M11Rik|TAFA3|Tafa-3	family with sequence similarity 19, member A3	protein-coding
unique_peak1-4789-14-7-0.899216160357645-0.947446088118041	chr3	131507660	131508238	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-240307	NM_020265	56811	Mm.103593	NM_020265	ENSMUSG00000028031	Dkk2	-	dickkopf homolog 2 (Xenopus laevis)	protein-coding
common_peak1-10124-50-27-1.23358539442135-3.96462675495423	chr13	31625614	31627936	+	0	NA	Intergenic	Intergenic	-23264	NM_008239	15220	Mm.44235	NM_008239	ENSMUSG00000038415	Foxq1	HFH-1|Hfh1|Hfh1l|sa	forkhead box Q1	protein-coding
common_peak1-14407-17-36--0.991157027423912-1.46094028072561	chr2	174075953	174076862	+	0	NA	Intergenic	ORR1A2|LTR|MaLR	16219	NR_029646	723906		NR_029646	miRBase:MI0000394	Mir296	Mirn296|mmu-mir-296	microRNA 296	ncRNA
common_peak2-28383-11-5-0.923731083530457-1.477227296591	chr4	139186197	139186611	+	0	NA	intron (NM_175438, intron 1 of 14)	intron (NM_175438, intron 1 of 14)	7595	NM_175438	212647	Mm.273571	NM_175438	ENSMUSG00000028737	Aldh4a1	A930035F14Rik|Ahd-1|Ahd1|Aldh4|Aldh5a1|E330022C09|P5cd|P5cdh|P5cdhl|P5cdhs|Ssdh1	aldehyde dehydrogenase 4 family, member A1	protein-coding
common_peak2-28156-26-28-0.0699180970308904-0.316008636696532	chr4	106859515	106860432	+	0	NA	intron (NM_029565, intron 2 of 7)	intron (NM_029565, intron 2 of 7)	8738	NM_029565	56374	Mm.291192	NM_029565	ENSMUSG00000028618	Tmem59	1110001M20Rik|3110046P06Rik|AI256529|D4Ertd20e|MTDCF1|ORF18	transmembrane protein 59	protein-coding
common_peak1-8696-11-15--0.491306415748387-0.435191258261915	chr11	69795589	69796160	+	0	NA	intron (NM_026017, intron 1 of 7)	B1_Mm|SINE|Alu	-1137	NM_018740	54351	Mm.13430	NM_018740	ENSMUSG00000018565	Elp5	Derp6|Rai12	elongator acetyltransferase complex subunit 5	protein-coding
unique_peak1-1174-16-3-2.11826364226806-2.65002542325363	chr11	100148695	100149604	+	0	NA	Intergenic	Intergenic	-17964	NM_212483	68239	Mm.158190	NM_212483	ENSMUSG00000053654	Krt42	2410039E07Rik|K17n|Ka22|ecat6	keratin 42	protein-coding
common_peak1-13706-45-48-0.245648181229663-0.50619083865892	chr2	30657418	30659153	+	0	NA	intron (NR_028486, intron 1 of 6)	URR1B|DNA|MER1_type	899	NR_028486	73598	Mm.34166	NM_198000	ENSMUSG00000044320	1700001O22Rik	1700113K14Rik|4930549G18Rik	RIKEN cDNA 1700001O22 gene	protein-coding
common_peak1-12830-8-12--0.695217300193522-0.475924844171029	chr18	69920261	69920793	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	-164686	NM_201362	381175	Mm.266831	NM_201362	ENSMUSG00000038903	Ccdc68	BC046343	coiled-coil domain containing 68	protein-coding
unique_peak2-39387-6-10--0.894033508256995-1.21398586181642	chr9	21803988	21804529	+	0	NA	intron (NM_001163787, intron 1 of 12)	L1MA5A|LINE|L1	2820	NM_001163787	77609	Mm.159953	NM_029939	ENSMUSG00000039632	Ccdc151	AI644415|C330001K17Rik|b2b1885Clo	coiled-coil domain containing 151	protein-coding
unique_peak2-38949-4-8--1.19338551529556-1.21878474469819	chr8	27168347	27168847	+	0	NA	intron (NM_207659, intron 15 of 21)	G-rich|Low_complexity|Low_complexity	-24484	NR_110583	76604	Mm.437190	NR_110583		1700047A11Rik	4930554C15Rik	RIKEN cDNA 1700047A11 gene	ncRNA
common_peak2-23639-27-40--0.366006053722848-0.494448899774786	chr15	83555117	83555858	+	0	NA	promoter-TSS (NM_001271473)	promoter-TSS (NM_001271473)	-18	NM_022723	64706	Mm.40393	NM_022723	ENSMUSG00000016763	Scube1	7330410C13Rik|A630023E24Rik	signal peptide, CUB domain, EGF-like 1	protein-coding
unique_peak1-4322-22-7-1.6472841050874-2.63337704757512	chr2	150998715	150999641	+	0	NA	Intergenic	Intergenic	75197	NM_001097977	433486	Mm.422661	NM_001097977	ENSMUSG00000079006	Gm14151	OTTMUSG00000015806	predicted gene 14151	protein-coding
common_peak2-26277-2-9--2.23938235115068-1.87199725847353	chr2	30720184	30720619	+	0	NA	intron (NM_009116, intron 1 of 3)	intron (NM_009116, intron 1 of 3)	19514	NM_009116	20204	Mm.1802	NM_009116	ENSMUSG00000039476	Prrx2	Prx2|S8	paired related homeobox 2	protein-coding
common_peak1-9687-51-18-1.82699631215899-6.82988781420237	chr12	16869705	16871487	+	0	NA	Intergenic	Intergenic	-31188	NM_009072	19878	Mm.276024	NM_009072	ENSMUSG00000020580	Rock2	B230113H15Rik|ROKalpha|Rho-kinase|Rock-II|Rock2m|mKIAA0619	Rho-associated coiled-coil containing protein kinase 2	protein-coding
common_peak1-13510-36-39-0.157392991280392-0.394172396164276	chr2	94010212	94011409	+	0	NA	Intergenic	B3|SINE|B2	-12744	NM_019657	56348	Mm.22505	NM_019657	ENSMUSG00000027195	Hsd17b12	2610510O05Rik|AI172963|KIK-I|Kik1	hydroxysteroid (17-beta) dehydrogenase 12	protein-coding
common_peak1-7474-72-76-0.401797272177417-1.12865934592523	chr1	171293956	171295291	+	0	NA	Intergenic	Intergenic	166972	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
unique_peak2-33666-5-7--0.704380336005853-1.01466476204226	chr11	100912254	100912677	+	0	NA	intron (NM_001243049, intron 18 of 20)	intron (NM_001243049, intron 18 of 20)	-18943	NM_013792	27419	Mm.95452	NM_013792	ENSMUSG00000001751	Naglu	-	alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)	protein-coding
unique_peak1-5026-14-4-1.57728806547028-2.4322161449009	chr4	130640311	130640785	+	0	NA	Intergenic	MTEb|LTR|MaLR	140248	NM_010769	17180	Mm.271796	NM_010769	ENSMUSG00000040533	Matn1	CMP|Crtm|Mat1|matrilin-1	matrilin 1, cartilage matrix protein	protein-coding
unique_peak1-5816-17-7-1.21829633820504-1.55050753388977	chr6	70839852	70840399	+	0	NA	exon (NM_010121, exon 12 of 17)	exon (NM_010121, exon 12 of 17)	28791	NM_028825	74221	Mm.273326	NM_028825	ENSMUSG00000051896	Tex37	1700011F03Rik	testis expressed 37	protein-coding
unique_peak1-6111-29-3-3.11229008061511-7.18213847587511	chr6	127268736	127270257	+	0	NA	Intergenic	Intergenic	-11511	NR_073373	232386	Mm.257367	NR_073373		D130058E03	-	uncharacterized D130058E03	ncRNA
common_peak2-23750-78-104-0.0925755764944123-0.365384636616234	chr15	97830741	97832038	+	0	NA	intron (NM_031163, intron 1 of 53)	intron (NM_031163, intron 1 of 53)	3766	NM_031163	12824	Mm.2423	NM_031163	ENSMUSG00000022483	Col2a1	Col2|Col2a|Col2a-1|Del1|Dmm|Lpk|M100856|Rgsc856	collagen, type II, alpha 1	protein-coding
common_peak1-10829-28-19-0.7310310249341-1.12969433525548	chr14	101805616	101806408	+	0	NA	Intergenic	L1Md_F3|LINE|L1	202396	NM_001081278	210789	Mm.320639	NM_173380	ENSMUSG00000033083	Tbc1d4	5930406J04Rik|A930035N22|AV295684|As160	TBC1 domain family, member 4	protein-coding
unique_peak1-7374-9-0-3.18961340640422-3.01029995663981	chrX	57386954	57387493	+	0	NA	intron (NM_001289730, intron 3 of 25)	intron (NM_001289730, intron 3 of 25)	13654	NM_133197	109904	Mm.93796	NM_133197	ENSMUSG00000031139	Mcf2	B230117G22Rik|Dbl|Mcf-2	mcf.2 transforming sequence	protein-coding
unique_peak2-38690-0-5--3.42509343119537-1.32905871926422	chr7	101938756	101939096	+	0	NA	Intergenic	L1Md_A|LINE|L1	-1420221	NM_011858	23966	Mm.254610	NM_011858	ENSMUSG00000048078	Tenm4	Doc4|ELM2|Odz4|R75022|Ten-m4|l(7)-3Rn|l7Rn3|mKIAA1302	teneurin transmembrane protein 4	protein-coding
common_peak1-13995-112-163-0.0756982957021988-0.365666694900825	chr2	104493222	104495003	+	0	NA	intron (NM_145529, intron 13 of 20)	intron (NM_145529, intron 13 of 20)	58207	NM_177190	320554	Mm.249065	NM_177190	ENSMUSG00000027175	Tcp11l1	C130096D04Rik	t-complex 11 like 1	protein-coding
common_peak2-25979-155-113-1.16471048564872-12.6556645164398	chr19	53599823	53600979	+	0	NA	Intergenic	Intergenic	-3407	NM_001085390	240672	Mm.482424	NM_001085390		Dusp5	Gm337	dual specificity phosphatase 5	protein-coding
common_peak1-9088-37-50--0.146432270485676-0.337231681760967	chr11	69900490	69902144	+	0	NA	Intergenic	Intergenic	-4829	NM_007493	11890	Mm.1357	NM_007493	ENSMUSG00000040963	Asgr2	ASGPR2|Asgr|Asgr-2	asialoglycoprotein receptor 2	protein-coding
common_peak1-14785-14-54--1.88214355316702-5.38214435188356	chr3	89418567	89419108	+	0	NA	intron (NM_080466, intron 3 of 7)	intron (NM_080466, intron 3 of 7)	94751	NM_080466	140493	Mm.120250	NM_080466		Kcnn3	KCa2.3|SK3|SKCA3	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	protein-coding
unique_peak2-33319-0-8--4.01005593191652-2.05605744720049	chr11	8924103	8924582	+	0	NA	intron (NM_001290519, intron 6 of 9)	B3A|SINE|B2	-13202	NM_008316	15574	Mm.42201	NM_008316	ENSMUSG00000020413	Hus1	mHus1	Hus1 homolog (S. pombe)	protein-coding
unique_peak1-4810-8-0-3.00522241794757-2.70926996097583	chr3	142330029	142330551	+	0	NA	Intergenic	RLTR1B-int|LTR|ERV1	-33722	NM_173763	229905	Mm.289643	NM_173763	ENSMUSG00000040213	Ccbl2	KATIII|Kat3	cysteine conjugate-beta lyase 2	protein-coding
unique_peak1-686-10-4-1.03448725012141-1.5150158574804	chr10	77581131	77581539	+	0	NA	Intergenic	Intergenic	49222	NM_015790	50723	Mm.17819	NM_015790	ENSMUSG00000000732	Icosl	AU044799|B7-H2|B7RP-1|B7h|BG071784|GI50|GL50|GL50-B|ICOS-L|Icoslg|LICOS|Ly115l|mKIAA0653	icos ligand	protein-coding
unique_peak1-4967-14-3-1.89921616035764-2.80787975886178	chr4	106628304	106629163	+	0	NA	intron (NM_198438, intron 4 of 16)	intron (NM_198438, intron 4 of 16)	44658	NM_023672	72475	Mm.195635	NM_023672	ENSMUSG00000061887	Ssbp3	2610021L12Rik|2610200M23Rik|5730488C10Rik|AI854733|AW551939|LAST|SSDP1	single-stranded DNA binding protein 3	protein-coding
common_peak2-25076-13-9-0.456543935750406-0.53895475198017	chr18	35553297	35553817	+	0	NA	intron (NM_030749, intron 3 of 9)	intron (NM_030749, intron 3 of 9)	105022	NM_030749	81500	Mm.291482	NM_030749	ENSMUSG00000024357	Sil1	1810057E01Rik|AI042831|wz	endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)	protein-coding
unique_peak2-35598-4-6--0.830815435910851-0.989110657569874	chr17	79285197	79285554	+	0	NA	intron (NM_001163625, intron 6 of 6)	RLTR12B|LTR|ERVK	-3463	NM_011163	19106	Mm.378990	NM_011163	ENSMUSG00000024079	Eif2ak2	2310047A08Rik|4732414G15Rik|AI467567|AI747578|Pkr|Prkr|Tik	eukaryotic translation initiation factor 2-alpha kinase 2	protein-coding
common_peak2-21818-37-42-0.0997283167837208-0.340524918943711	chr11	119299191	119300224	+	0	NA	Intergenic	MTD|LTR|MaLR	47921	NR_035453	100316690		NR_035453	miRBase:MI0009921	Mir1932	mmu-mir-1932	microRNA 1932	ncRNA
common_peak1-11259-27-30-0.0373496405083609-0.315041925765932	chr15	80233977	80234892	+	0	NA	Intergenic	RMER15|LTR|ERVL	116766	NM_001044308	239556	Mm.291058	NM_001044308	ENSMUSG00000022416	Cacna1i	Ca(V)3.3	calcium channel, voltage-dependent, alpha 1I subunit	protein-coding
unique_peak2-38955-3-6--1.22133801201688-1.08602067057793	chr8	31520339	31520753	+	0	NA	Intergenic	Lx8|LINE|L1	-158321	NR_045856	71314	Mm.158666	NR_045856	ENSMUSG00000097044	4933433F19Rik	-	RIKEN cDNA 4933433F19 gene	ncRNA
unique_peak2-34186-4-7--1.02346051385325-1.09384600808989	chr13	36696476	36696871	+	0	NA	Intergenic	ORR1D2|LTR|MaLR	129673	NM_153529	68404	Mm.232930	NM_153529	ENSMUSG00000039114	Nrn1	0710008J23Rik|Cpg15|Nrn	neuritin 1	protein-coding
unique_peak2-39413-4-14--1.93035110946177-2.23384849113406	chr9	35210388	35210953	+	0	NA	Intergenic	Intergenic	-48991	NM_021339	57810	Mm.80509	NM_021339	ENSMUSG00000038119	Cdon	CDO|Cd0|Orcam	cell adhesion molecule-related/down-regulated by oncogenes	protein-coding
common_peak1-10844-26-35--0.24202590928385-0.384630725886657	chr14	105898388	105899454	+	0	NA	intron (NR_045921, intron 1 of 2)	intron (NR_045921, intron 1 of 2)	916	NR_045921	74864	Mm.159344	NR_045921	ENSMUSG00000022116	4930449E01Rik	-	RIKEN cDNA 4930449E01 gene	ncRNA
common_peak1-12043-6-11--1.01956439034085-1.32595962126035	chr17	21476249	21476770	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	25528	NM_134200	171234	Mm.405416	NM_134200	ENSMUSG00000058030	Vmn1r237	V1rf3|Vfrf3	vomeronasal 1 receptor 237	protein-coding
common_peak1-11865-20-14-0.581184188982674-0.690311289528838	chr16	92685600	92686447	+	0	NA	intron (NM_001111022, intron 4 of 6)	intron (NM_001111022, intron 4 of 6)	11551	NM_001111023	12394	Mm.4081	NM_009821	ENSMUSG00000022952	Runx1	AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b	runt related transcription factor 1	protein-coding
common_peak2-28776-22-41--0.745033317691356-1.15174830603352	chr5	53266828	53267637	+	0	NA	Intergenic	L1M2|LINE|L1	41858	NM_024213	52206	Mm.272568	NM_024213		Anapc4	2610306D21Rik|APC4|D5Ertd249e	anaphase promoting complex subunit 4	protein-coding
common_peak1-13173-21-12-0.869049547125143-1.18646456559501	chr19	12011284	12012175	+	0	NA	exon (NM_172635, exon 15 of 19)	exon (NM_172635, exon 15 of 19)	13511	NR_105960	102465601		NR_105960		Mir6994	mmu-mir-6994	microRNA mir-6994	ncRNA
unique_peak2-34140-9-18--1.05831410703937-0.965105923112245	chr13	23683435	23684008	+	0	NA	intron (NM_001177653, intron 1 of 1)	intron (NM_001177653, intron 1 of 1)	-5882	NM_001290530	319179	Mm.440391	NM_178194	ENSMUSG00000047246	Hist1h2be	-	histone cluster 1, H2be	protein-coding
common_peak2-20388-23-38--0.563634714353168-0.792515101870073	chr10	19591762	19592556	+	0	NA	intron (NM_008822, intron 8 of 9)	intron (NM_008822, intron 8 of 9)	-20894	NM_029529	76157	Mm.74324	NM_029529	ENSMUSG00000050473	Slc35d3	6230421J19Rik|Frcl1	solute carrier family 35, member D3	protein-coding
common_peak2-21358-17-18--0.0296311752385474-0.306899554715732	chr11	78163845	78164831	+	0	NA	Intergenic	Intergenic	7314	NM_011676	22248	Mm.284811	NM_011676	ENSMUSG00000002058	Unc119	D11Bhm52|HRG4|MRG4|Rg4|Rtg4|Unc119h	unc-119 homolog (C. elegans)	protein-coding
common_peak2-22402-60-87--0.105139757016766-0.333157056450534	chr13	33935239	33936762	+	0	NA	promoter-TSS (NM_001045535)	promoter-TSS (NM_001045535)	-723	NM_001045535	435350	Mm.263418	NM_001045535	ENSMUSG00000069248	Serpinb6e	Gm11396|OTTMUSG00000000720|SPI3B|ovalbumin	serine (or cysteine) peptidase inhibitor, clade B, member 6e	protein-coding
common_peak2-25825-201-111-1.64249077301065-28.5643975600471	chr19	38601281	38603139	+	0	NA	intron (NM_019588, intron 1 of 31)	intron (NM_019588, intron 1 of 31)	3523	NM_019588	74055	Mm.34031	NM_019588	ENSMUSG00000024998	Plce1	4933403A21Rik|PLCepsilon|Plce|mKIAA1516	phospholipase C, epsilon 1	protein-coding
common_peak1-17557-13-25--0.921967687503323-0.983972868822056	chr7	30649484	30650174	+	0	NA	intron (NM_172740, intron 2 of 3)	(CCCTG)n|Simple_repeat|Simple_repeat	4831	NM_172740	233058	Mm.297657	NM_172740	ENSMUSG00000058402	Zfp420	B230119D13|B230312I18Rik|mszf59-1|mszf70	zinc finger protein 420	protein-coding
unique_peak1-1918-21-4-2.24756117037887-3.74275476306371	chr14	74867230	74868317	+	0	NA	Intergenic	Intergenic	112439	NR_046059	74425	Mm.399498	NR_046059		4933402J15Rik	-	RIKEN cDNA 4933402J15 gene	ncRNA
unique_peak2-33671-6-10--0.894033508256995-1.21398586181642	chr11	101424237	101424847	+	0	NA	intron (NM_001252222, intron 7 of 22)	B1_Mus2|SINE|Alu	10574	NM_001252223	17966	Mm.784	NM_008676	ENSMUSG00000017119	Nbr1	mKIAA0049	neighbor of Brca1 gene 1	protein-coding
common_peak1-19012-77-118--0.110291183751946-0.361996120475765	chr9	62342426	62344853	+	0	NA	intron (NM_175484, intron 1 of 11)	intron (NM_175484, intron 1 of 11)	41212	NM_175484	235431	Mm.335229	NM_175484	ENSMUSG00000041729	Coro2b	CLIPINC|E130012P22Rik	coronin, actin binding protein, 2B	protein-coding
common_peak2-20277-22-22-0.123722149030391-0.342639663781856	chr1	191183564	191184167	+	0	NA	intron (NM_001281848, intron 1 of 5)	intron (NM_001281848, intron 1 of 5)	-15794	NM_001281847	16526	Mm.33304	NM_010607	ENSMUSG00000037624	Kcnk2	A430027H14Rik|AI848635|TREK-1	potassium channel, subfamily K, member 2	protein-coding
common_peak1-13363-18-14-0.406028555619833-0.532159081577619	chr19	45783950	45784597	+	0	NA	Intergenic	Intergenic	20775	NR_045307	71232	Mm.50944	NR_045307		4933429K18Rik	-	RIKEN cDNA 4933429K18 gene	ncRNA
common_peak1-15678-28-23-0.467996619100306-0.690880484874617	chr4	137664094	137665261	+	0	NA	intron (NM_001256198, intron 10 of 32)	intron (NM_001256198, intron 10 of 32)	-54447	NR_105825	102466907		NR_105825		Mir6399	mmu-mir-6399	microRNA mir-6399	ncRNA
unique_peak2-34290-10-11--0.228547155712387-0.31137425193576	chr13	74363325	74363905	+	0	NA	intron (NM_009644, intron 5 of 10)	(GA)n|Simple_repeat|Simple_repeat	-17467	NM_177333	211446	Mm.261859	NM_177333	ENSMUSG00000034152	Exoc3	2810050O03Rik|E430013E20Rik|Sec6|Sec6l1	exocyst complex component 3	protein-coding
common_peak1-10094-27-30-0.0373496405083609-0.315041925765932	chr13	24799785	24800656	+	0	NA	intron (NM_029679, intron 15 of 22)	intron (NM_029679, intron 15 of 22)	53586	NM_020567	57441	Mm.12239	NM_020567	ENSMUSG00000006715	Gmnn	AW546347|Gem	geminin	protein-coding
common_peak1-11224-22-13-0.8399291830298-1.1381569562463	chr15	79325128	79326110	+	0	NA	intron (NM_008427, intron 1 of 1)	intron (NM_008427, intron 1 of 1)	10052	NM_008427	16520	Mm.140760	NM_008427	ENSMUSG00000044216	Kcnj4	IRK3|Kcnf2|MB-IRK3	potassium inwardly-rectifying channel, subfamily J, member 4	protein-coding
common_peak1-15989-12-11-0.0638134843664826-0.337263207250336	chr5	32725198	32725803	+	0	NA	Intergenic	Intergenic	-35843	NM_172707	19046	Mm.241931	NM_172707		Ppp1cb	1200010B19	protein phosphatase 1, catalytic subunit, beta isoform	protein-coding
unique_peak1-1007-12-3-1.64877598508764-2.36932189928148	chr11	72946387	72946948	+	0	NA	intron (NM_008399, intron 24 of 30)	intron (NM_008399, intron 24 of 30)	5129	NM_010353	14841	Mm.42045	NM_010353	ENSMUSG00000050107	Gsg2	Haspin	germ cell-specific gene 2	protein-coding
common_peak1-10218-14-20--0.493101262421116-0.456667090758524	chr13	49420598	49421191	+	0	NA	Intergenic	Intergenic	-16024	NM_001039179	76895	Mm.197387	NM_029791	ENSMUSG00000037933	Bicd2	-	bicaudal D homolog 2 (Drosophila)	protein-coding
unique_peak2-38666-7-10--0.660340788339108-1.12966497611638	chr7	98360459	98360947	+	0	NA	intron (NM_011807, intron 1 of 22)	L1MD1|LINE|L1	121407	NM_011807	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
common_peak2-31354-36-40-0.121769081549671-0.36493371439645	chr8	84664409	84665458	+	0	NA	Intergenic	Intergenic	261552	NM_001254747	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak1-13825-52-51-0.407820272124607-0.889546191492162	chr2	57353143	57354877	+	0	NA	Intergenic	URR1B|DNA|MER1_type	263217	NM_010274	14571	Mm.3711	NM_010274	ENSMUSG00000026827	Gpd2	AA408484|AI448216|AU021455|AW494132|GPDH|Gdm1|Gpd-m|Gpdh-m|TISP38	glycerol phosphate dehydrogenase 2, mitochondrial	protein-coding
unique_peak2-38839-10-14--0.550475250599749-0.446472590016315	chr7	143008823	143009633	+	0	NA	Intergenic	Intergenic	-101166	NM_001081117	17345	Mm.4078	NM_001081117	ENSMUSG00000031004	Mki67	D630048A14Rik|Ki-67|Ki67	antigen identified by monoclonal antibody Ki 67	protein-coding
unique_peak2-34000-7-8--0.370834171144123-1.00793137938329	chr12	91686101	91686632	+	0	NA	Intergenic	B4A|SINE|B4	290512	NM_010050	13371	Mm.21389	NM_010050	ENSMUSG00000007682	Dio2	5DII|AI324267|DIOII	deiodinase, iodothyronine, type II	protein-coding
common_peak1-17675-14-21--0.560215458279653-0.519193887192484	chr7	65862114	65862803	+	0	NA	Intergenic	Intergenic	-51114	NM_009728	11982	Mm.135129	NM_009728	ENSMUSG00000025324	Atp10a	Atp10c|pfatp	ATPase, class V, type 10A	protein-coding
common_peak1-10791-39-21-1.15632962828186-2.80248000195415	chr14	76477689	76479425	+	0	NA	Intergenic	Intergenic	32065	NM_026177	67467	Mm.260767	NM_026177	ENSMUSG00000022008	Gpalpp1	1200011I18Rik|Kiaa1704	GPALPP motifs containing 1	protein-coding
unique_peak1-2679-12-2-2.06381348436648-2.79529063155376	chr16	58553098	58553597	+	0	NA	Intergenic	Intergenic	-29922	NM_018784	54613	Mm.212742	NM_018784	ENSMUSG00000022747	St3gal6	1700023B24Rik|AI930218|AW552396|Siat10|St3galVI	ST3 beta-galactoside alpha-2,3-sialyltransferase 6	protein-coding
common_peak1-16716-67-47-0.959448982061839-3.64481793216275	chr6	29347250	29349109	+	0	NA	promoter-TSS (NM_145574)	promoter-TSS (NM_145574)	-747	NM_145574	232664	Mm.251303	NM_145574	ENSMUSG00000029769	Ccdc136	4921511K06Rik|BC006583	coiled-coil domain containing 136	protein-coding
common_peak2-20597-30-39--0.15225268539549-0.327094617740873	chr10	79840535	79841883	+	0	NA	Intergenic	Intergenic	9187	NM_198615	237400	Mm.268389	NM_198615	ENSMUSG00000048696	Mex3d	BC059858|Rkhd1	mex3 homolog D (C. elegans)	protein-coding
common_peak1-18526-49-79--0.315644271862179-0.643324565023122	chr8	94011750	94012959	+	0	NA	intron (NM_011936, intron 7 of 8)	intron (NM_011936, intron 7 of 8)	174930	NM_011936	26383	Mm.4375	NM_011936	ENSMUSG00000055932	Fto	AW743446|mKIAA1752	fat mass and obesity associated	protein-coding
common_peak1-16903-21-33--0.517973575984104-0.610902792227722	chr6	72370740	72372008	+	0	NA	intron (NM_019802, intron 4 of 14)	B1_Mus2|SINE|Alu	7072	NM_019802	56316	Mm.19937	NM_019802	ENSMUSG00000053460	Ggcx	-	gamma-glutamyl carboxylase	protein-coding
common_peak2-20828-21-19-0.247561170378873-0.427564438475253	chr10	128626024	128626763	+	0	NA	Intergenic	Intergenic	-1918	NM_207008	257664	Mm.377884	NM_207008	ENSMUSG00000096000	Olfr773	GA_x6K02T2PULF-10872859-10871923|MOR114-15|Olfr773-ps1	olfactory receptor 773	protein-coding
unique_peak2-37258-2-6--1.72480917832092-1.26211192963361	chr4	106629327	106629651	+	0	NA	intron (NM_198438, intron 4 of 16)	B4|SINE|B4	45414	NM_023672	72475	Mm.195635	NM_023672	ENSMUSG00000061887	Ssbp3	2610021L12Rik|2610200M23Rik|5730488C10Rik|AI854733|AW551939|LAST|SSDP1	single-stranded DNA binding protein 3	protein-coding
common_peak1-10834-97-169--0.22538986464542-0.699752542946777	chr14	103098599	103100036	+	0	NA	Intergenic	Intergenic	282532	NR_039592	100628599		NR_039592	miRBase:MI0018042	Mir5130	mmu-mir-5130|mu-mir-5130	microRNA 5130	ncRNA
common_peak2-27791-23-30--0.232428805877794-0.363124929330844	chr3	138060687	138061611	+	0	NA	Intergenic	Lx|LINE|L1	-17312	NM_011996	26876	Mm.158750	NM_011996	ENSMUSG00000037797	Adh4	Adh2	alcohol dehydrogenase 4 (class II), pi polypeptide	protein-coding
common_peak1-13159-15-18--0.235762762887929-0.326591483156968	chr19	10577257	10578038	+	0	NA	intron (NM_025333, intron 3 of 3)	intron (NM_025333, intron 3 of 3)	-20260	NM_133689	67752	Mm.25939	NM_133689	ENSMUSG00000035179	Ppp1r32	4930579J09Rik|AU015816|IIIG9|IIIG9L|IIIG9S	protein phosphatase 1, regulatory subunit 32	protein-coding
unique_peak2-35287-5-8--0.874305337448166-1.10484139239135	chr17	6778800	6779249	+	0	NA	Intergenic	ID_B1|SINE|B4	-27364	NM_001166627	100040531	Mm.457987	NM_001166627	ENSMUSG00000095677	Dynlt1f	100040631|Dynlt1e	dynein light chain Tctex-type 1F	protein-coding
common_peak2-28349-23-29--0.185123091099438-0.336580821310529	chr4	135678181	135679483	+	0	NA	Intergenic	Intergenic	-20905	NM_008321	15903	Mm.110	NM_008321		Id3	Hlh462|Idb3|bHLHb25	inhibitor of DNA binding 3	protein-coding
unique_peak2-34650-1-26--4.38194451238021-6.57132529354008	chr14	118234924	118235829	+	0	NA	intron (NM_011821, intron 4 of 8)	intron (NM_011821, intron 4 of 8)	117693	NR_105747	102465148		NR_105747	miRBase:MI0021586	Mir6239	mmu-mir-6239	microRNA mir-6239	ncRNA
common_peak2-27097-197-327-0.0572906090699359-0.364748521894472	chr3	135690328	135692444	+	0	NA	Intergenic	Intergenic	-188153	NR_040540	71038	Mm.410798	NR_040540		4933401H06Rik	-	RIKEN cDNA 4933401H06 gene	ncRNA
unique_peak1-5894-8-0-3.00522241794757-2.70926996097583	chr6	87171949	87172467	+	0	NA	intron (NM_054041, intron 12 of 17)	intron (NM_054041, intron 12 of 17)	113561	NM_054041	69538	Mm.232525	NM_054041	ENSMUSG00000033420	Antxr1	2310008J16Rik|2810405N18Rik|Antrx1|Tem8	anthrax toxin receptor 1	protein-coding
common_peak1-9491-36-27-0.671966164110151-1.28863469260242	chr11	107547673	107548653	+	0	NA	TTS (NM_198298)	TTS (NM_198298)	29627	NM_007582	12299	Mm.57093	NM_007582	ENSMUSG00000020722	Cacng1	-	calcium channel, voltage-dependent, gamma subunit 1	protein-coding
unique_peak2-38831-3-5--0.998945590680433-0.96108193396963	chr7	141456738	141457094	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-40136	NM_007400	11489	Mm.439714	NM_007400	ENSMUSG00000054555	Adam12	Mltna|mKIAA4001	a disintegrin and metallopeptidase domain 12 (meltrin alpha)	protein-coding
common_peak2-22357-21-15-0.569489265266236-0.756118839439552	chr13	24831689	24832396	+	0	NA	Intergenic	PB1|SINE|Alu	21764	NM_020567	57441	Mm.12239	NM_020567	ENSMUSG00000006715	Gmnn	AW546347|Gem	geminin	protein-coding
unique_peak2-36663-4-5--0.608423014574403-0.909929411522249	chr3	27209499	27210019	+	0	NA	Intergenic	Intergenic	-6240	NM_009425	22035	Mm.1062	NM_009425	ENSMUSG00000039304	Tnfsf10	A330042I21Rik|AI448571|APO-2L|Ly81|TL2|Trail	tumor necrosis factor (ligand) superfamily, member 10	protein-coding
common_peak1-15299-65-68-0.383641482698958-0.968381485337565	chr4	43393699	43396296	+	0	NA	5' UTR (NM_001037709, exon 1 of 12)	5' UTR (NM_001037709, exon 1 of 12)	143	NM_001037709	100213	Mm.235730	NM_199057	ENSMUSG00000035969	Rusc2	AI840675|mKIAA0375	RUN and SH3 domain containing 2	protein-coding
common_peak1-12756-28-44--0.438893976508212-0.643431604871956	chr18	60560557	60561561	+	0	NA	Intergenic	L1Md_F2|LINE|L1	25376	NM_001146275	60440	Mm.261140	NM_021792	ENSMUSG00000054072	Iigp1	2900074L10Rik|AI046432|AW111922|Ifgga1|Iigp|Irga6	interferon inducible GTPase 1	protein-coding
common_peak2-31801-14-11-0.314253659636488-0.435191258261915	chr9	35569855	35570369	+	0	NA	Intergenic	Intergenic	15582	NM_001167673	100312986	Mm.437659	NM_001167673	ENSMUSG00000090738	Gm17727	Pate-e	predicted gene, 17727	protein-coding
unique_peak2-38315-2-7--1.91745425626332-1.45399745587252	chr6	145110214	145110571	+	0	NA	intron (NM_001281980, intron 11 of 18)	intron (NM_001281980, intron 11 of 18)	40133	NM_008511	16970	Mm.843	NM_008511	ENSMUSG00000030263	Lrmp	D6Int3|D6Int4|D6Int5|D6Int7|D6Int8|Jaw1	lymphoid-restricted membrane protein	protein-coding
common_peak2-30316-148-218-0.142467068040946-0.573059600639488	chr7	24457092	24460817	+	0	NA	Intergenic	L1Md_F2|LINE|L1	15619	NM_030735	81010	Mm.379267	NM_030735	ENSMUSG00000035523	Vmn1r172	V1rd9|V3R9	vomeronasal 1 receptor 172	protein-coding
unique_peak1-3890-7-0-2.79909083029819-2.40823996531185	chr2	18053762	18054205	+	0	NA	intron (NR_045538, intron 8 of 22)	B1_Mur3|SINE|Alu	67771	NM_001252561	17354	Mm.209175	NM_010804	ENSMUSG00000026743	Mllt10	Af10|B130021D15Rik|D630001B22Rik|mKIAA4140	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	protein-coding
common_peak1-8301-88-138--0.103528663552975-0.366918605579119	chr10	36973862	36975279	+	0	NA	Intergenic	Intergenic	-115838	NM_008538	17118	Mm.30059	NM_008538	ENSMUSG00000069662	Marcks	Macs|PKCSL	myristoylated alanine rich protein kinase C substrate	protein-coding
common_peak2-22727-42-29-0.835438732258665-1.96184293807029	chr13	107676383	107677401	+	0	NA	intron (NM_029665, intron 12 of 29)	intron (NM_029665, intron 12 of 29)	50103	NM_029665	76582	Mm.132208	NM_029665	ENSMUSG00000042590	Ipo11	1700081H05Rik|2510001A17Rik|AI314624|AW555235|E330021B14Rik|Ranbp11	importin 11	protein-coding
common_peak1-18992-23-30--0.232428805877794-0.363124929330844	chr9	57708399	57709100	+	0	NA	Intergenic	Intergenic	-26708	NM_019689	56380	Mm.425588	NM_019689	ENSMUSG00000004661	Arid3b	Bdp|Dri2	AT rich interactive domain 3B (BRIGHT-like)	protein-coding
unique_peak2-33689-8-20--1.38709500483119-1.45476480588849	chr11	103266553	103267434	+	0	NA	intron (NM_183034, intron 1 of 11)	B2_Mm1t|SINE|B2	6985	NM_183034	353047	Mm.383308	NM_183034	ENSMUSG00000034247	Plekhm1	AP162|B2|BC038943|D330036J23Rik	pleckstrin homology domain containing, family M (with RUN domain) member 1	protein-coding
common_peak1-12638-158-184-0.499555203960282-3.27847883571233	chr18	34953503	34956073	+	0	NA	intron (NM_001081256, intron 3 of 23)	B3A|SINE|B2	18126	NM_001081256	277250	Mm.277906	NM_029518	ENSMUSG00000038773	Kdm3b	5830462I21Rik|JHDM2B|Jmjd1b|mKIAA1082	KDM3B lysine (K)-specific demethylase 3B	protein-coding
common_peak1-8566-20-24--0.155781405183531-0.319918318021793	chr10	95388597	95389389	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-14304	NM_001001932	216238	Mm.210035	NM_001001932	ENSMUSG00000036499	Eea1	A430109M19Rik|B230358H09Rik|ZFYVE2	early endosome antigen 1	protein-coding
unique_peak1-7246-13-4-1.45654393575041-2.23384849113406	chr9	78191130	78191765	+	0	NA	intron (NM_008182, intron 1 of 6)	B1_Mus2|SINE|Alu	3505	NM_008182	14858	Mm.422778	NM_008182	ENSMUSG00000057933	Gsta2	Gst2-2|Gstc-2|Gstc2	glutathione S-transferase, alpha 2 (Yc2)	protein-coding
unique_peak2-38825-6-7--0.434601889619698-0.97990265578305	chr7	141131284	141131717	+	0	NA	intron (NM_007400, intron 11 of 22)	intron (NM_007400, intron 11 of 22)	-157032	NM_001286031	101437	Mm.199223	NM_133941	ENSMUSG00000030986	Dhx32	3110079L04Rik|4732469F02Rik|AA408140|Ddx32	DEAH (Asp-Glu-Ala-His) box polypeptide 32	protein-coding
unique_peak1-4004-14-8-0.729291158915332-0.771068449301682	chr2	35676563	35677182	+	0	NA	intron (NR_040618, intron 1 of 2)	intron (NR_040618, intron 1 of 2)	2162	NR_040618	77665	Mm.400558	NR_040618	ENSMUSG00000086449	9030204H09Rik	-	RIKEN cDNA 9030204H09 gene	ncRNA
common_peak1-17779-25-38--0.423552313517143-0.564346534703877	chr7	97399966	97400869	+	0	NA	intron (NM_183293, intron 2 of 10)	ID4|SINE|ID	13525	NM_029256	75338	Mm.487222	NM_029256	ENSMUSG00000030617	Ccdc83	4930549K11Rik|4930554C01Rik|4932423M01Rik	coiled-coil domain containing 83	protein-coding
unique_peak1-5390-10-0-3.35641534500877-3.31132995230379	chr5	103671164	103671670	+	0	NA	intron (NR_040699, intron 5 of 6)	intron (NR_040699, intron 5 of 6)	-31064	NM_009158	26414	Mm.39253	NM_009158	ENSMUSG00000046709	Mapk10	C230008H04Rik|JNK3|JNK3B1|JNK3B2|SAPK(beta)|Serk2|p493F12|p54bSAPK	mitogen-activated protein kinase 10	protein-coding
common_peak2-25585-37-49--0.117863118288906-0.321605260051241	chr19	7340697	7341830	+	0	NA	Intergenic	Intergenic	-2991	NM_054048	104383	Mm.283859	NM_054048	ENSMUSG00000024968	Rcor2	1A13|AW122124|CoREST|Rcor|Rcor1	REST corepressor 2	protein-coding
common_peak2-24149-14-8-0.729291158915332-0.771068449301682	chr16	38282136	38282569	+	0	NA	intron (NM_001098404, intron 1 of 8)	GA-rich|Low_complexity|Low_complexity	12558	NM_010936	18171	Mm.8509	NM_010936	ENSMUSG00000022809	Nr1i2	PXR|PXR.1|PXR.2|PXR1|SXR|mPXR	nuclear receptor subfamily 1, group I, member 2	protein-coding
common_peak2-27764-13-21--0.680959587999529-0.607095980551316	chr3	129901253	129902133	+	0	NA	intron (NM_029838, intron 2 of 37)	(CAAAC)n|Simple_repeat|Simple_repeat	17930	NM_001244952	77018	Mm.91728	NM_029838	ENSMUSG00000058897	Col25a1	2700062B08Rik|CLAC-P	collagen, type XXV, alpha 1	protein-coding
unique_peak2-34821-14-24--0.74464002941708-0.756118839439549	chr15	74955237	74956465	+	0	NA	Intergenic	MERVL-int|LTR|ERVL	-13472	NM_001099217	100041546	Mm.482110	NM_001099217	ENSMUSG00000022584	Ly6c2	Ly-6C.2|Ly-6C2	lymphocyte antigen 6 complex, locus C2	protein-coding
common_peak1-16021-18-10-0.853487532591054-1.03889213727317	chr5	35740325	35741040	+	0	NA	Intergenic	CpG	8916	NM_010445	15371	Mm.358606	NM_010445	ENSMUSG00000067438	Hmx1	Nkx5-3	H6 homeobox 1	protein-coding
common_peak2-21673-33-29-0.42444696691701-0.683454027796267	chr11	103362975	103364146	+	0	NA	Intergenic	Intergenic	-89582	NM_183034	353047	Mm.383308	NM_183034	ENSMUSG00000034247	Plekhm1	AP162|B2|BC038943|D330036J23Rik	pleckstrin homology domain containing, family M (with RUN domain) member 1	protein-coding
unique_peak1-4703-9-4-0.867685311516858-1.36011389749466	chr3	101406918	101407439	+	0	NA	intron (NM_144900, intron 1 of 22)	intron (NM_144900, intron 1 of 22)	1452	NM_144900	11928	Mm.280103	NM_144900	ENSMUSG00000033161	Atp1a1	Atpa-1|BC010319	ATPase, Na+/K+ transporting, alpha 1 polypeptide	protein-coding
common_peak1-15026-33-49--0.312518627249196-0.498996592876743	chr3	121290854	121292029	+	0	NA	Intergenic	Intergenic	54962	NR_036456	100503044	Mm.65320	NM_176992	ENSMUSG00000044522	A730020M07Rik	-	RIKEN cDNA A730020M07 gene	ncRNA
common_peak1-7974-11-7-0.508693584251613-1.21681515183528	chr1	157369039	157369640	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-35911	NM_001145781	72482	Mm.288249	NM_026683	ENSMUSG00000033701	Acbd6	0610010G04Rik|2610100E10Rik	acyl-Coenzyme A binding domain containing 6	protein-coding
unique_peak1-3305-30-7-2.16967540949187-4.94875252701509	chr18	77953011	77954265	+	0	NA	promoter-TSS (NM_178670)	promoter-TSS (NM_178670)	715	NR_027978	67640	Mm.482903	NM_026289		4930465K10Rik	-	RIKEN cDNA 4930465K10 gene	ncRNA
unique_peak1-4881-26-11-1.34293659143731-2.2880788707084	chr4	34686800	34687717	+	0	NA	Intergenic	Intergenic	-9803	NM_027041	69329	Mm.389548	NM_027041	ENSMUSG00000028294	1700003M02Rik	AU024269	RIKEN cDNA 1700003M02 gene	protein-coding
common_peak1-8495-10-23--1.22854715571239-1.44380006500971	chr10	81136467	81136977	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	24908	NM_001142963	100233208	Mm.327168	NM_001142963		Gm10778	ENSMUSG00000074860	predicted gene 10778	protein-coding
common_peak1-16276-40-33-0.571512841500759-1.1451285992054	chr5	108694110	108695014	+	0	NA	Intergenic	Lx7|LINE|L1	-3354	NM_026106	13486	Mm.303534	NM_026106	ENSMUSG00000029265	Dr1	1700121L09Rik|Dr1l|NC2|NC2beta	down-regulator of transcription 1	protein-coding
common_peak1-8170-19-39--0.919240768225676-1.49187957593	chr10	25296522	25297369	+	0	NA	Intergenic	Intergenic	-40867	NM_001195596	100504474	Mm.46323	NM_001195596	ENSMUSG00000096546	Smlr1	2010003K15Rik	small leucine-rich protein 1	protein-coding
unique_peak2-37970-8-12--0.695217300193522-0.475924844171029	chr6	124485246	124485739	+	0	NA	intron (NM_144938, intron 6 of 11)	intron (NM_144938, intron 6 of 11)	6847	NM_144938	50908	Mm.219527	NM_144938	ENSMUSG00000038521	C1s1	AA959438|AI255193|AI327365|C1s|C1sa	complement component 1, s subcomponent 1	protein-coding
common_peak2-24217-76-128--0.249282869559972-0.632145354087965	chr16	78375630	78377155	+	0	NA	intron (NM_001297747, intron 1 of 4)	CpG	610	NR_002700	654432	Mm.458574	NR_002700	ENSMUSG00000044645	Gm7334	EG654432	B-cell translocation gene 3 pseudogene	pseudo
common_peak2-28339-13-29--1.12841856497075-1.46151065785802	chr4	134930711	134931512	+	0	NA	intron (NM_145555, intron 3 of 4)	B1_Mm|SINE|Alu	10476	NM_001168498	230822	Mm.35548	NM_145555	ENSMUSG00000043924	Ncmap	A330049M08Rik|AA545175|Mp11	noncompact myelin associated protein	protein-coding
common_peak2-24489-10-8-0.186490343566457-1.078512453669	chr17	25115599	25115999	+	0	NA	intron (NM_020608, intron 11 of 20)	intron (NM_020608, intron 11 of 20)	-18231	NM_198937	52009	Mm.371601	NM_198937	ENSMUSG00000024165	Hn1l	2810430B18Rik|AL022629|C16orf34|D17Ertd441e	hematological and neurological expressed 1-like	protein-coding
common_peak1-16341-20-27--0.319280137466411-0.412012472183092	chr5	118448467	118449142	+	0	NA	intron (NM_145564, intron 9 of 11)	intron (NM_145564, intron 9 of 11)	22025	NM_145564	231670	Mm.21912	NM_145564	ENSMUSG00000032898	Fbxo21	2810425J22Rik|AU016673|mKIAA0875	F-box protein 21	protein-coding
common_peak2-21643-158-216-0.269385432032114-1.26378191682844	chr11	101641082	101642151	+	0	NA	intron (NM_008815, intron 4 of 12)	intron (NM_008815, intron 4 of 12)	5008	NM_008815	18612	Mm.5025	NM_008815	ENSMUSG00000017724	Etv4	AW414408|Pea-3|Pea3	ets variant 4	protein-coding
unique_peak2-34929-3-6--1.22133801201688-1.08602067057793	chr15	85692677	85693004	+	0	NA	exon (NM_013882, exon 3 of 11)	exon (NM_013882, exon 3 of 11)	2464	NM_013882	29870	Mm.20858	NM_013882	ENSMUSG00000022385	Gtse1	B99|Gtse-1	G two S phase expressed protein 1	protein-coding
common_peak2-29630-31-57--0.632742324314449-1.23216191351737	chr6	56714763	56715771	+	0	NA	Intergenic	Intergenic	32540	NM_145958	210973	Mm.57295	NM_145958	ENSMUSG00000059486	Kbtbd2	BC022962|Bklhd1|mKIAA1489	kelch repeat and BTB (POZ) domain containing 2	protein-coding
common_peak1-9267-16-24--0.525592547506663-0.561823156887258	chr11	87404511	87405276	+	0	NA	promoter-TSS (NM_133215)	promoter-TSS (NM_133215)	-826	NM_133215	170749	Mm.399376	NM_133215	ENSMUSG00000018401	Mtmr4	AA596759|ESTM44|FYVE-DSP2|ZFYVE11|mKIAA0647	myotubularin related protein 4	protein-coding
unique_peak2-37470-5-17--1.87430533744817-1.80287260729378	chr5	3151408	3152056	+	0	NA	Intergenic	Intergenic	-192580	NM_009873	12571	Mm.31672	NM_009873	ENSMUSG00000040274	Cdk6	5830411I20|AI504062|Crk2	cyclin-dependent kinase 6	protein-coding
common_peak1-10144-32-41--0.113225403559101-0.311888488969622	chr13	34344253	34345382	+	0	NA	intron (NM_001033167, intron 3 of 10)	B2_Mm2|SINE|B2	89984	NM_001110515	69666	Mm.24788	NM_001101430	ENSMUSG00000071451	Psmg4	PAC-4|mPAC4	proteasome (prosome, macropain) assembly chaperone 4	protein-coding
common_peak1-13926-30-26-0.414787907328405-0.652802052802684	chr2	84715425	84716651	+	0	NA	intron (NM_199223, intron 2 of 2)	intron (NM_199223, intron 2 of 2)	10811	NM_199223	269295	Mm.86447	NM_199223	ENSMUSG00000050896	Rtn4rl2	Ngr2|Ngrh1|Ngrl3	reticulon 4 receptor-like 2	protein-coding
common_peak2-28898-9-7-0.18961340640422-1.05908390183068	chr5	91072965	91073398	+	0	NA	Intergenic	ORR1D2|LTR|MaLR	-3668	NM_028478	73246	Mm.30172	NM_028478	ENSMUSG00000029370	Rassf6	1600016B17Rik	Ras association (RalGDS/AF-6) domain family member 6	protein-coding
unique_peak1-5218-15-3-2.01216475055566-3.03427613622886	chr5	36717701	36718432	+	0	NA	intron (NM_030889, intron 1 of 26)	intron (NM_030889, intron 1 of 26)	22722	NM_030889	81840	Mm.34113	NM_030889	ENSMUSG00000029093	Sorcs2	N28137|mKIAA1329	sortilin-related VPS10 domain containing receptor 2	protein-coding
unique_peak1-7305-8-0-3.00522241794757-2.70926996097583	chr9	117017854	117018279	+	0	NA	intron (NM_001172122, intron 2 of 13)	T-rich|Low_complexity|Low_complexity	143535	NM_001172123	207181	Mm.326411	NM_178660	ENSMUSG00000039607	Rbms3	6720477E09Rik|8430436O14Rik	RNA binding motif, single stranded interacting protein	protein-coding
common_peak2-29881-34-33-0.294605685750927-0.53611512876719	chr6	112244921	112245937	+	0	NA	intron (NM_144799, intron 1 of 5)	intron (NM_144799, intron 1 of 5)	-5116	NR_045986	100503613	Mm.136719	NM_177012		5031434C07Rik	-	RIKEN cDNA 5031434C07 gene	ncRNA
unique_peak2-38127-7-7--0.200909169701811-0.97990265578305	chr6	83135847	83136279	+	0	NA	intron (NM_001198866, intron 5 of 31)	intron (NM_001198866, intron 5 of 31)	6480	NM_007835	13191	Mm.6919	NM_007835	ENSMUSG00000031865	Dctn1	AL022633|Glued|p150|p150<glued>	dynactin 1	protein-coding
common_peak2-26072-16-27--0.689091279789542-0.798885335210229	chr2	92389111	92389841	+	0	NA	Intergenic	Intergenic	-42887	NR_106080	102466819		NR_106080	miRBase:MI0023716	Mir7221	mmu-mir-7221	microRNA mir-7221	ncRNA
unique_peak2-36807-7-8--0.370834171144123-1.00793137938329	chr3	84270282	84270776	+	0	NA	intron (NM_001205355, intron 2 of 11)	intron (NM_001205355, intron 2 of 11)	12884	NM_001205355	229474	Mm.331107	NM_001033301		Fhdc1	6330505N24Rik|Gm126	FH2 domain containing 1	protein-coding
common_peak1-18686-17-14-0.311405742596519-0.466170754204149	chr8	120407937	120408691	+	0	NA	Intergenic	Intergenic	-82485	NM_026758	68533	Mm.181836	NM_026758	ENSMUSG00000031843	Mphosph6	1110001M01Rik|AA536809|C86426	M phase phosphoprotein 6	protein-coding
common_peak1-11196-8-8--0.164702583494742-1.00793137938329	chr15	77838869	77839300	+	0	NA	intron (NM_007583, intron 2 of 3)	intron (NM_007583, intron 2 of 3)	-37830	NM_018749	55944	Mm.3955	NM_018749	ENSMUSG00000016554	Eif3d	66/67kDa|AA407891|Eif3s7|eIF3p66	eukaryotic translation initiation factor 3, subunit D	protein-coding
common_peak1-13819-10-6-0.549060422951165-1.21398586181642	chr2	52960559	52961006	+	0	NA	intron (NM_172409, intron 11 of 26)	intron (NM_172409, intron 11 of 26)	89439	NM_018785	56194	Mm.257474	NM_018785	ENSMUSG00000061136	Prpf40a	2810012K09Rik|FBP11|Fnbp11|Fnbp3	PRP40 pre-mRNA processing factor 40 homolog A (yeast)	protein-coding
common_peak2-23494-81-154--0.404074802265672-1.40141782675522	chr15	76008844	76010253	+	0	NA	exon (NM_201390, exon 31 of 32)	exon (NM_201390, exon 31 of 32)	16592	NM_201394	18810	Mm.234912	NM_011117	ENSMUSG00000022565	Plec	AA591047|AU042537|EBS1|PCN|PLTN|Plec1	plectin	protein-coding
common_peak2-25309-67-90-0.0366168425842988-0.311709846559118	chr18	75000466	75001206	+	0	NA	Intergenic	Intergenic	61970	NM_177470	52538	Mm.245724	NM_177470	ENSMUSG00000036880	Acaa2	0610011L04Rik|AI255831|AI265397|D18Ertd240e	acetyl-Coenzyme A acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A thiolase)	protein-coding
common_peak1-19149-8-20--1.38709500483119-1.45476480588849	chr9	88438334	88438855	+	0	NA	Intergenic	Lx3_Mus|LINE|L1	-4264	NM_001142943	71640	Mm.259988	NM_001142943	ENSMUSG00000032425	Zfp949	4930422I07Rik	zinc finger protein 949	protein-coding
common_peak2-20183-8-5-0.420259917226415-1.10484139239135	chr1	172242892	172243297	+	0	NA	TTS (NM_001039593)	TTS (NM_001039593)	4102	NM_001039593	76925	Mm.33631	NM_001039593	ENSMUSG00000042800	1700015E13Rik	-	RIKEN cDNA 1700015E13 gene	protein-coding
common_peak2-27935-21-59--1.33740133034228-3.60837645652533	chr4	21930958	21932010	+	0	NA	Intergenic	Intergenic	73011	NM_175234	76132	Mm.159689	NM_175234		Faxc	6230409E13Rik|AW742931	failed axon connections homolog (Drosophila)	protein-coding
common_peak2-28335-27-43--0.467885667742062-0.652627812244285	chr4	134852508	134853395	+	0	NA	Intergenic	B1F2|SINE|Alu	-24276	NM_013885	29876	Mm.257765	NM_013885	ENSMUSG00000037242	Clic4	D0Jmb3|TU-74|mc3s5|mtCLIC	chloride intracellular channel 4 (mitochondrial)	protein-coding
common_peak1-19278-12-6-0.841421063030034-1.58711810488664	chr9	118995139	118995793	+	0	NA	intron (NR_121571, intron 1 of 14)	intron (NR_121571, intron 1 of 14)	1913	NM_001293648	18799	Mm.23963	NM_019676	ENSMUSG00000010660	Plcd1	AW212592|C79986	phospholipase C, delta 1	protein-coding
common_peak1-8403-23-7-1.72176750450908-2.82905316394614	chr10	68446313	68447309	+	0	NA	Intergenic	Intergenic	-224489	NM_001252636	69288	Mm.26659	NM_001081347	ENSMUSG00000019944	Rhobtb1	1700008H16Rik|3110048G13Rik|AI173445|AI573858|AV350930	Rho-related BTB domain containing 1	protein-coding
common_peak1-14410-6-11--1.01956439034085-1.32595962126035	chr2	174415810	174416192	+	0	NA	Intergenic	MTC|LTR|MaLR	-53034	NM_001099328	100043757	Mm.48711	NM_001099328	ENSMUSG00000050600	Zfp831	ENSMUSG00000050600|OTTMUSG00000017459	zinc finger protein 831	protein-coding
unique_peak2-37015-4-6--0.830815435910851-0.989110657569874	chr3	123204228	123204607	+	0	NA	intron (NM_008939, intron 9 of 10)	intron (NM_008939, intron 9 of 10)	6567	NR_028573	100306957	Mm.260791	NR_028573	ENSMUSG00000092730	Snora24	ACA24	small nucleolar RNA, H/ACA box 24	snoRNA
unique_peak2-35820-5-17--1.87430533744817-1.80287260729378	chr18	64340148	64340854	+	0	NA	intron (NR_045366, intron 2 of 5)	intron (NR_045366, intron 2 of 5)	-73512	NM_009182	20451	Mm.252110	NM_009182	ENSMUSG00000056812	St8sia3	AI847333|ST8SiaIII|Siat8c	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	protein-coding
unique_peak1-7387-7-4-0.477162735410827-1.09384600808989	chrX	95444424	95444817	+	0	NA	intron (NM_013476, intron 1 of 7)	intron (NM_013476, intron 1 of 7)	99531	NM_013476	11835	Mm.39005	NM_013476		Ar	AW320017|Tfm	androgen receptor	protein-coding
common_peak1-10285-9-9--0.132314688483142-1.03275496310833	chr13	62760224	62760729	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-34934	NM_173381	211378	Mm.247448	NM_173381		6720489N17Rik	9330128I06	RIKEN cDNA 6720489N17 gene	protein-coding
unique_peak1-1646-10-1-2.35641534500877-2.57096726280955	chr13	55171537	55172044	+	0	NA	intron (NM_001293660, intron 4 of 12)	intron (NM_001293660, intron 4 of 12)	29866	NM_011307	20184	Mm.259301	NM_011307	ENSMUSG00000025878	Uimc1	9430016E08Rik|D330018D10Rik|D630032M02Rik|RIP110|Rxrip110	ubiquitin interaction motif containing 1	protein-coding
common_peak2-31125-41-58--0.181494344513181-0.372131646957075	chr8	33928665	33930436	+	0	NA	Intergenic	Lx|LINE|L1	130948	NM_001177589	100042715	Mm.291093	NM_001177589		Gm3985	-	predicted gene 3985	protein-coding
unique_peak1-6219-27-11-1.40658345017408-2.62629506227042	chr7	141507379	141508693	+	0	NA	intron (NM_001081331, intron 2 of 7)	Lx7|LINE|L1	48531	NM_001199941	71007	Mm.334285	NM_001081331	ENSMUSG00000030994	D7Ertd443e	4933400E14Rik|FATS|Gm497	DNA segment, Chr 7, ERATO Doi 443, expressed	protein-coding
common_peak2-22284-16-24--0.525592547506663-0.561823156887258	chr13	12702547	12703479	+	0	NA	Intergenic	Intergenic	39649	NR_003568	664862	Mm.415635	NR_003568		Gpr137b-ps	2310041G17Rik|ENSMUSG00000075118	G protein-coupled receptor 137B, pseudogene	pseudo
common_peak2-29924-38-23-0.986490158577374-2.25413655118513	chr6	115501248	115502223	+	0	NA	intron (NM_199033, intron 3 of 11)	intron (NM_199033, intron 3 of 11)	7013	NM_199033	381802	Mm.291208	NM_199033	ENSMUSG00000042389	Tsen2	AU067695	tRNA splicing endonuclease 2 homolog (S. cerevisiae)	protein-coding
common_peak1-19474-31-48--0.389471173302085-0.611014125894502	chrX	134600879	134601814	+	0	NA	intron (NM_030688, intron 2 of 10)	intron (NM_030688, intron 2 of 10)	142773	NM_026469	67944	Mm.443280	NM_026469	ENSMUSG00000071686	Tex13a	1700025D03Rik	testis expressed 13A	protein-coding
unique_peak2-37949-2-13--2.72480917832092-2.79529063155376	chr5	150594112	150594648	+	0	NA	Intergenic	Intergenic	19946	NR_077242	100861794	Mm.402054	NR_077242		Gm21221	-	predicted gene, 21221	ncRNA
common_peak2-25967-41-34-0.571865687903694-1.12519986426579	chr19	53314639	53315680	+	0	NA	intron (NM_001164101, intron 12 of 13)	GA-rich|Low_complexity|Low_complexity	14536	NR_036590	69319	Mm.57452	NR_036590		1700001K23Rik	-	RIKEN cDNA 1700001K23 gene	ncRNA
common_peak1-13047-37-20-1.13367564870706-2.58657013435546	chr19	5813856	5814997	+	0	NA	Intergenic	MIR3|SINE|MIR	-11755	NR_002847	72289	Mm.298256	NR_002847	ENSMUSG00000092341	Malat1	2210401K01Rik|9430072K23Rik|AI647968|Neat2	metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)	ncRNA
unique_peak1-1381-27-9-1.66961785600787-3.27210358356897	chr12	54805364	54806482	+	0	NA	intron (NM_013780, intron 4 of 11)	intron (NM_013780, intron 4 of 11)	456259	NM_013780	27386	Mm.247044	NM_013780	ENSMUSG00000021010	Npas3	4930423H22Rik|bHLHe12	neuronal PAS domain protein 3	protein-coding
unique_peak1-3058-7-0-2.79909083029819-2.40823996531185	chr18	8231735	8232172	+	0	NA	Intergenic	Intergenic	362758	NM_153085	225131	Mm.204524	NM_153085	ENSMUSG00000024283	Wac	1110067P07Rik|A230035H12Rik|AI256735|AI256776|Wwp4	WW domain containing adaptor with coiled-coil	protein-coding
common_peak2-30419-11-14--0.398197011356905-0.379391706698377	chr7	39552467	39552789	+	0	NA	Intergenic	Intergenic	-239416	NM_001013810	434171	Mm.60990	NM_001013810	ENSMUSG00000060565	Gm5591	EG434171	predicted gene 5591	protein-coding
unique_peak1-5520-11-0-3.50869358425161-3.61235994796777	chr5	138708403	138708966	+	0	NA	TTS (NR_045821)	TTS (NR_045821)	-3404	NM_153161	231807	Mm.164493	NM_153161	ENSMUSG00000036948	BC037034	-	cDNA sequence BC037034	protein-coding
unique_peak2-36695-3-6--1.22133801201688-1.08602067057793	chr3	36344555	36344927	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	29705	NR_105976	102466786		NR_105976	miRBase:MI0022858	Mir7009	mmu-mir-7009	microRNA mir-7009	ncRNA
unique_peak1-7070-27-2-3.40658345017408-7.23262596636762	chr9	14751487	14752515	+	0	NA	Intergenic	ORR1E-int|LTR|MaLR	-43606	NM_022888	64931	Mm.86738	NM_022888	ENSMUSG00000031933	Folr4	0910001L11Rik|C86255|Folbp3|Juno	folate receptor 4 (delta)	protein-coding
unique_peak1-3939-59-5-3.74040150015142-17.6300199224231	chr2	27739501	27741036	+	0	NA	Intergenic	MIRc|SINE|MIR	-1677	NM_015734	12831	Mm.7281	NM_015734	ENSMUSG00000026837	Col5a1	AI413331	collagen, type V, alpha 1	protein-coding
common_peak1-11586-22-31--0.352715894912595-0.440892966163086	chr16	16213043	16213973	+	0	NA	promoter-TSS (NM_026163)	promoter-TSS (NM_026163)	70	NM_026163	67451	Mm.2252	NM_026163	ENSMUSG00000041957	Pkp2	1200008D14Rik|1200012P04Rik|AA516617|Pkp2l	plakophilin 2	protein-coding
unique_peak2-38218-2-13--2.72480917832092-2.79529063155376	chr6	114969196	114969905	+	0	NA	intron (NM_026894, intron 4 of 7)	MTC|LTR|MaLR	18342	NM_026894	68971	Mm.24937	NM_026894	ENSMUSG00000030316	Tamm41	1500001M20Rik|TAM41	TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)	protein-coding
unique_peak1-6757-12-0-3.64877598508764-4.21441993929574	chr8	56222077	56222688	+	0	NA	Intergenic	Intergenic	182301	NM_001253756	234267	Mm.241700	NM_153581	ENSMUSG00000031517	Gpm6a	Gpm6|M6A	glycoprotein m6a	protein-coding
common_peak1-16942-13-32--1.26592208872068-1.87214134458702	chr6	83571858	83572531	+	0	NA	Intergenic	Intergenic	33916	NM_016751	51811	Mm.3115	NM_016751	ENSMUSG00000014542	Clec4f	Clecsf13|D18063|KUCR_MOUSE|Kclr	C-type lectin domain family 4, member f	protein-coding
unique_peak2-38715-16-22--0.405298313788951-0.440610794044987	chr7	110843685	110844401	+	0	NA	Intergenic	RSINE1|SINE|B4	-21067	NM_001025386	436002	Mm.389933	NM_001025386	ENSMUSG00000094822	Olfr243	MOR22-4|Olfr243-ps1|Olfr627|Olfr627-ps1	olfactory receptor 243	protein-coding
unique_peak2-38394-4-7--1.02346051385325-1.09384600808989	chr7	19344939	19345298	+	0	NA	Intergenic	RLTR45-int|LTR|ERVK	-26533	NR_024208	20958	Mm.423480	NR_024208		Sycp1-ps1	Sycp1-rs	synaptonemal complex protein 1, pseudogene 1	pseudo
unique_peak1-3526-17-4-1.89636824331768-2.60953805094651	chr19	20409572	20410323	+	0	NA	Intergenic	L1_Mus1|LINE|L1	55214	NM_010730	16952	Mm.248360	NM_010730	ENSMUSG00000024659	Anxa1	Anx-1|Anx-A1|C430014K04Rik|Lpc-1|Lpc1	annexin A1	protein-coding
common_peak1-12925-88-84-0.606021473032831-2.38109619744203	chr19	3849713	3852717	+	0	NA	promoter-TSS (NM_001271496)	promoter-TSS (NM_001271496)	-558	NM_001271496	12660	Mm.225505	NM_013490	ENSMUSG00000024843	Chka	CK|CK/EK-alpha|Chetk-alpha|Chk|ChoK|EK|EtnK-alpha	choline kinase alpha	protein-coding
unique_peak2-34631-3-6--1.22133801201688-1.08602067057793	chr14	78935306	78935750	+	0	NA	intron (NM_001164503, intron 1 of 11)	intron (NM_001164503, intron 1 of 11)	1139	NM_001164503	219181	Mm.89413	NM_001164503	ENSMUSG00000022016	Akap11	6330501D17Rik|AKAP220|Gm80|PRKA11|mKIAA0629	A kinase (PRKA) anchor protein 11	protein-coding
unique_peak1-4546-7-0-2.79909083029819-2.40823996531185	chr3	38042285	38042802	+	0	NA	Intergenic	Intergenic	64498	NR_040541	71342	Mm.410782	NR_040541		5430434I15Rik	-	RIKEN cDNA 5430434I15 gene	ncRNA
common_peak2-21714-35-38-0.145968039600255-0.368093376636814	chr11	109349449	109350591	+	0	NA	intron (NM_028710, intron 3 of 13)	ID_B1|SINE|B4	-15110	NM_001029842	104681	Mm.265874	NM_134038	ENSMUSG00000041920	Slc16a6	AW743111|ESTM12|MCT 6|MCT 7|MCT6	solute carrier family 16 (monocarboxylic acid transporters), member 6	protein-coding
common_peak1-19386-20-26--0.266812717572275-0.373496418836697	chrX	41911220	41911869	+	0	NA	Intergenic	Lx3C|LINE|L1	-190030	NM_175539	245403	Mm.55270	NM_175539	ENSMUSG00000050926	Dcaf12l2	A130007F10Rik|Wdr40c	DDB1 and CUL4 associated factor 12-like 2	protein-coding
common_peak2-30983-12-11-0.0638134843664826-0.337263207250336	chr8	3467321	3467962	+	0	NA	promoter-TSS (NM_026951)	promoter-TSS (NM_026951)	7	NM_026951	69129	Mm.45279	NM_026951		Pex11g	1810022F11Rik|1810049N02Rik|Pex11c|Pex11gamma	peroxisomal biogenesis factor 11 gamma	protein-coding
unique_peak2-37246-3-9--1.73591118484664-1.57096726280955	chr4	99091529	99092058	+	0	NA	Intergenic	L1_Mus2|LINE|L1	230955	NM_001145967	242557	Mm.241663	NM_175029	ENSMUSG00000028550	Atg4c	Apg4-C|Apg4c|Atg4cl|Autl1	autophagy related 4C, cysteine peptidase	protein-coding
common_peak2-30656-73-61-0.738198696038347-2.66291228502395	chr7	100474101	100475629	+	0	NA	Intergenic	Intergenic	246476	NM_021427	58238	Mm.113787	NM_021427		Fam181b	A830059I20Rik|AB041569	family with sequence similarity 181, member B	protein-coding
unique_peak1-3763-7-5-0.214128329577033-1.01466476204226	chr19	55060186	55060695	+	0	NA	Intergenic	L1VL4|LINE|L1	113497	NM_008149	14732	Mm.210196	NM_008149	ENSMUSG00000024978	Gpam	GPAT|GPAT1	glycerol-3-phosphate acyltransferase, mitochondrial	protein-coding
unique_peak2-39167-4-7--1.02346051385325-1.09384600808989	chr8	94357637	94358055	+	0	NA	Intergenic	Intergenic	-32293	NM_008393	16373	Mm.238044	NM_008393	ENSMUSG00000031734	Irx3	AI894186	Iroquois related homeobox 3	protein-coding
common_peak1-8953-43-52-0.054642730960504-0.319297110585539	chr11	54866196	54867426	+	0	NA	intron (NM_177471, intron 3 of 6)	MTEa|LTR|MaLR	-19838	NM_013472	11749	Mm.265347	NM_013472	ENSMUSG00000018340	Anxa6	AW107198|Anx6|AnxVI|Cabm|Camb	annexin A6	protein-coding
common_peak1-11995-7-6--0.00826409175941478-0.97990265578305	chr17	13187160	13187677	+	0	NA	Intergenic	Intergenic	-2013	NM_175394	60532	Mm.275521	NM_175394	ENSMUSG00000060475	Wtap	2810408K05Rik|9430038B09Rik	Wilms tumour 1-associating protein	protein-coding
common_peak1-10830-13-17--0.391452970804544-0.364171515310935	chr14	101839519	101840191	+	0	NA	Intergenic	Intergenic	168553	NM_001081278	210789	Mm.320639	NM_173380	ENSMUSG00000033083	Tbc1d4	5930406J04Rik|A930035N22|AV295684|As160	TBC1 domain family, member 4	protein-coding
common_peak2-22613-10-8-0.186490343566457-1.078512453669	chr13	75514688	75515194	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	-267553	NR_030451	751556		NR_030451	miRBase:MI0004644	Mir682	Mirn682|mir-682|mmu-mir-682	microRNA 682	ncRNA
unique_peak1-56-6-2-0.980435609659146-1.26211192963361	chr1	33064695	33065205	+	0	NA	Intergenic	L1Md_F|LINE|L1	-460812	NM_001164286	408191	Mm.479439	NM_001164286	ENSMUSG00000091318	Gm5415	EG408191|Senp14	predicted gene 5415	protein-coding
common_peak2-26178-41-37-0.453221191405075-0.852626677849445	chr2	23156041	23157008	+	0	NA	Intergenic	L1Md_F3|LINE|L1	-20242	NM_008752	18232	Mm.131616	NM_008752	ENSMUSG00000069132	Nxph2	-	neurexophilin 2	protein-coding
unique_peak2-39344-5-7--0.704380336005853-1.01466476204226	chr9	56950511	56950810	+	0	NA	intron (NM_001110350, intron 9 of 20)	intron (NM_001110350, intron 9 of 20)	26477	NM_011378	20466	Mm.15755	NM_011378	ENSMUSG00000042557	Sin3a	AW553200|Sin3|mKIAA4126|mSin3A	transcriptional regulator, SIN3A (yeast)	protein-coding
common_peak1-9338-32-20-0.886774596440899-1.65365064026544	chr11	95982572	95983615	+	0	NA	Intergenic	PB1D10|SINE|Alu	-9817	NM_001271018	76815	Mm.296049	NM_029755	ENSMUSG00000006056	Calcoco2	2410154J16Rik|C77254|Ndp52|Ndp52l1	calcium binding and coiled-coil domain 2	protein-coding
common_peak2-25480-22-17-0.477359103645092-0.633951497070961	chr19	4817464	4818072	+	0	NA	Intergenic	Intergenic	-6134	NM_019869	56275	Mm.276338	NM_019869	ENSMUSG00000006456	Rbm14	1300007E16Rik|PSP2|Sytip|p16|p16K	RNA binding motif protein 14	protein-coding
unique_peak1-4264-8-1-2.00522241794757-2.05605744720049	chr2	131666502	131666960	+	0	NA	intron (NR_029381, intron 1 of 2)	intron (NR_029381, intron 1 of 2)	6661	NR_029381	414081	Mm.246905	NR_029381	ENSMUSG00000086822	5330413P13Rik	-	RIKEN cDNA 5330413P13 gene	ncRNA
common_peak1-14898-13-13--0.0288828914198356-0.309074325783021	chr3	96268316	96268841	+	0	NA	Intergenic	Intergenic	-12349	NM_001256180	329716	Mm.275223	NM_183223	ENSMUSG00000046317	BC107364	D730018G16	cDNA sequence BC107364	protein-coding
common_peak2-19641-29-43--0.347141538022187-0.479515789778906	chr1	43091953	43093180	+	0	NA	TTS (NM_053107)	TTS (NM_053107)	62901	NM_001013025	73122	Mm.246069	NM_001013025	ENSMUSG00000070939	Tgfbrap1	3110018K12Rik|AU024090|AU042859|AW742551|Trap1	transforming growth factor, beta receptor associated protein 1	protein-coding
common_peak1-19105-10-16--0.73104749624157-0.604422558181019	chr9	73905310	73905857	+	0	NA	Intergenic	Intergenic	-52558	NM_001033500	546144	Mm.335289	NM_177908	ENSMUSG00000044976	Wdr72	AW558070|D230040E23	WD repeat domain 72	protein-coding
common_peak2-19725-41-27-0.893793782791056-2.04885494247584	chr1	72225838	72226403	+	0	NA	intron (NM_001005423, intron 2 of 4)	intron (NM_001005423, intron 2 of 4)	32761	NM_001005423	381269	Mm.422636	NM_001005423	ENSMUSG00000039395	Mreg	Gm974|Wdt2|dsu	melanoregulin	protein-coding
common_peak2-29137-12-8-0.478850983645327-0.562038191119709	chr5	125080254	125080678	+	0	NA	intron (NM_011596, intron 1 of 19)	intron (NM_011596, intron 1 of 19)	833	NM_011596	21871	Mm.1158	NM_011596		Atp6v0a2	8430408C20Rik|AI385560|ATP6a2|AW489264|Atp6n1d|Atp6n2|C76904|ISF|J6B7|SHIF|Stv1|TJ6M|TJ6s|Tj6|V-ATPase 116 kDa|V-ATPase a2	ATPase, H+ transporting, lysosomal V0 subunit A2	protein-coding
unique_peak2-37655-6-9--0.75652998450706-1.11707584880836	chr5	91987433	91987963	+	0	NA	intron (NM_145562, intron 1 of 3)	MTEa|LTR|MaLR	40972	NM_145562	231440	Mm.5002	NM_145562		Parm1	2210012L08Rik|9130213B05Rik|W91666	prostate androgen-regulated mucin-like protein 1	protein-coding
common_peak1-17473-13-13--0.0288828914198356-0.309074325783021	chr7	19933171	19933825	+	0	NA	intron (NM_001127324, intron 2 of 6)	intron (NM_001127324, intron 2 of 6)	3078	NM_007948	13870	Mm.280913	NM_007948	ENSMUSG00000003549	Ercc1	Ercc-1	excision repair cross-complementing rodent repair deficiency, complementation group 1	protein-coding
common_peak2-23147-25-35--0.308075096097206-0.423354874519378	chr14	105898418	105899495	+	0	NA	intron (NR_045921, intron 1 of 2)	intron (NR_045921, intron 1 of 2)	951	NR_045921	74864	Mm.159344	NR_045921	ENSMUSG00000022116	4930449E01Rik	-	RIKEN cDNA 4930449E01 gene	ncRNA
common_peak1-9098-30-30-0.215479099104998-0.419637632935632	chr11	70458824	70460109	+	0	NA	exon (NM_024211, exon 3 of 8)	exon (NM_024211, exon 3 of 8)	1075	NM_024211	67863	Mm.296082	NM_024211	ENSMUSG00000014606	Slc25a11	2310022P18Rik|2oxoc	solute carrier family 25 (mitochondrial carrier oxoglutarate carrier), member 11	protein-coding
common_peak1-9029-12-29--1.25811461052088-1.65862513589797	chr11	62077017	62077656	+	0	NA	intron (NM_007413, intron 1 of 1)	intron (NM_007413, intron 1 of 1)	14850	NM_007413	11541	Mm.40740	NM_007413	ENSMUSG00000018500	Adora2b	A2BAR|A2BR|A2b|AA2BR|AI480866|AI605384	adenosine A2b receptor	protein-coding
unique_peak2-36355-1-9--2.94898510510411-2.31132995230379	chr2	100687041	100687539	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-777615	NM_009020	19374	Mm.4988	NM_009020	ENSMUSG00000032864	Rag2	Rag-2	recombination activating gene 2	protein-coding
unique_peak1-581-9-0-3.18961340640422-3.01029995663981	chr10	7167539	7168070	+	0	NA	Intergenic	L1_Mus2|LINE|L1	-45544	NR_045946	619314	Mm.145928	NR_045946		B020014A21Rik	-	RIKEN cDNA B020014A21 gene	ncRNA
common_peak2-20890-73-127--0.307604993574778-0.845833420372485	chr11	3648112	3649868	+	0	NA	intron (NM_152818, intron 2 of 13)	B1_Mus1|SINE|Alu	90287	NM_198162	74522	Mm.139127	NM_198162	ENSMUSG00000034543	Morc2a	8430403M08Rik|Zcwcc1	microrchidia 2A	protein-coding
common_peak2-29378-12-12--0.0516637330534535-0.309718203022949	chr6	13909605	13910224	+	0	NA	Intergenic	L1Md_F2|LINE|L1	88345	NR_045995	76311	Mm.367129	NR_045995	ENSMUSG00000097616	1110019D14Rik	-	RIKEN cDNA 1110019D14 gene	ncRNA
common_peak1-17884-43-61--0.171633124863172-0.368450600203475	chr7	118491163	118492339	+	0	NA	Intergenic	Intergenic	-225562	NR_015573	75479	Mm.381620	NR_015573		1700012D14Rik	-	RIKEN cDNA 1700012D14 gene	ncRNA
unique_peak1-2524-13-3-1.77847203063777-2.58603100924543	chr16	20726704	20727293	+	0	NA	intron (NM_001289894, intron 4 of 5)	PB1D10|SINE|Alu	3673	NM_001289896	21832	Mm.3943	NM_009379	ENSMUSG00000022847	Thpo	Mgdf|Ml|Mpllg|Tpo	thrombopoietin	protein-coding
unique_peak2-39529-2-8--2.08737925770563-1.65811743852845	chr9	66124313	66124613	+	0	NA	Intergenic	MLT1B|LTR|MaLR	-73794	NM_145617	235439	Mm.244179	NM_145617	ENSMUSG00000038664	Herc1	2810449H11Rik|B230218H07|D130015N03Rik|tbl	hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1	protein-coding
common_peak2-24751-22-45--0.876277850969609-1.55933022783608	chr17	53689456	53690283	+	0	NA	Intergenic	Intergenic	-11093	NM_173449	110332	Mm.444633	NM_173449	ENSMUSG00000044957	Pp2d1	4921523A10Rik	protein phosphatase 2C-like domain containing 1	protein-coding
common_peak2-25591-14-24--0.74464002941708-0.756118839439549	chr19	8702778	8703556	+	0	NA	TTS (NM_008766)	TTS (NM_008766)	10681	NM_008766	18399	Mm.30090	NM_008766	ENSMUSG00000024650	Slc22a6	NKT|Oat1|Orctl1|mOat1	solute carrier family 22 (organic anion transporter), member 6	protein-coding
unique_peak1-5249-12-2-2.06381348436648-2.79529063155376	chr5	53463393	53463955	+	0	NA	TTS (NM_011402)	TTS (NM_011402)	23082	NM_011402	20531	Mm.284891	NM_011402	ENSMUSG00000029188	Slc34a2	AA536683|D5Ertd227e|NaPi-2b|Npt2b	solute carrier family 34 (sodium phosphate), member 2	protein-coding
common_peak1-13937-36-51--0.221118631973337-0.382513308492835	chr2	90579429	90581153	+	0	NA	Intergenic	MER21B|LTR|ERV1	-5236	NM_018828	55935	Mm.489638	NM_018828	ENSMUSG00000008200	Fnbp4	FBP30|Fnbp30|mKIAA1014	formin binding protein 4	protein-coding
common_peak2-27971-16-37--1.12966387117552-1.94848218498813	chr4	42949824	42950292	+	0	NA	intron (NM_172690, intron 5 of 9)	intron (NM_172690, intron 5 of 9)	-15908	NM_019874	56323	Mm.20437	NM_019874	ENSMUSG00000036052	Dnajb5	1110058L06Rik|AI462558|Hsc40|Hsp40-3	DnaJ (Hsp40) homolog, subfamily B, member 5	protein-coding
unique_peak1-1649-20-3-2.48807478459119-3.8429424127101	chr13	58384661	58385411	+	0	NA	Intergenic	RLTR14|LTR|ERV1	-9487	NM_019832	56278	Mm.296625	NM_019832	ENSMUSG00000021552	Gkap1	42kDa|4933400B15Rik|D13Ertd340e|Gkap42	G kinase anchoring protein 1	protein-coding
unique_peak1-6399-11-4-1.18676548936425-1.68134727924692	chr7	80173224	80173891	+	0	NA	Intergenic	Intergenic	73397	NR_046024	625243	Mm.261798	NR_046024		Gm6567	-	predicted gene 6567	ncRNA
common_peak1-9425-47-37-0.686913911322963-1.59039787900524	chr11	101552028	101553410	+	0	NA	Intergenic	RMER17C-int|LTR|ERVK	25864	NM_025404	80981	Mm.266840	NM_025404	ENSMUSG00000034936	Arl4d	1110036H21Rik|ARL6|AW456149|Arf4l|Arfl4|Arl5	ADP-ribosylation factor-like 4D	protein-coding
unique_peak1-1479-7-2-1.21412832957703-1.45399745587252	chr12	112829729	112830255	+	0	NA	intron (NM_021516, intron 1 of 16)	intron (NM_021516, intron 1 of 16)	17271	NM_022801	17169	Mm.260504	NM_021516	ENSMUSG00000007411	Mark3	1600015G02Rik|A430080F22Rik|C-TAK1|ETK-1|ETK1|Emk2|MPK10	MAP/microtubule affinity-regulating kinase 3	protein-coding
unique_peak1-1171-13-0-3.77847203063777-4.51544993495972	chr11	99932315	99932880	+	0	NA	Intergenic	Intergenic	16943	NM_001159374	16670	Mm.4161	NM_010665	ENSMUSG00000046095	Krt32	Ha3|Hka2|K32|Krt1-2|Krtha2	keratin 32	protein-coding
common_peak1-18827-32-43--0.180339599417637-0.343417008601348	chr9	13322864	13323724	+	0	NA	Intergenic	Intergenic	88713	NR_028271	18689	Mm.41972	NM_008835		Phxr4	Sp5	per-hexamer repeat gene 4	ncRNA
common_peak2-19831-26-25-0.22745937401737-0.399869693390336	chr1	90234307	90235474	+	0	NA	intron (NM_134252, intron 10 of 26)	intron (NM_134252, intron 10 of 26)	31603	NM_134252	171382	Mm.218753	NM_134252	ENSMUSG00000036251	Trpm8	CMR1|LTRPC6|LTrpC-6|TRPP8|Trp-p8	transient receptor potential cation channel, subfamily M, member 8	protein-coding
common_peak1-13353-28-18-0.805031606377877-1.27334590136207	chr19	45017666	45019032	+	0	NA	intron (NM_001081225, intron 6 of 19)	intron (NM_001081225, intron 6 of 19)	12740	NM_001081225	226151	Mm.212609	NM_172638	ENSMUSG00000036097	Fam178a	3632432H19|6030443O07Rik|AU014917	family with sequence similarity 178, member A	protein-coding
common_peak2-22255-17-19--0.103631756682325-0.301029995663974	chr13	3679614	3680223	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	46640	NM_001267724	142688	Mm.253061	NM_178283	ENSMUSG00000033781	Asb13	2210015B19Rik|6430573K02Rik|Asb-13|C85285	ankyrin repeat and SOCS box-containing 13	protein-coding
common_peak1-12978-22-25--0.0531556130536872-0.301029995663976	chr19	4096582	4097514	+	0	NA	promoter-TSS (NM_026373)	promoter-TSS (NM_026373)	-303	NM_026373	52004	Mm.29609	NM_026373	ENSMUSG00000024856	Cdk2ap2	5830466O21Rik|D19Ertd144e|Doc-1r	CDK2-associated protein 2	protein-coding
unique_peak1-4826-11-1-2.50869358425161-2.83420869758413	chr3	145471548	145472142	+	0	NA	intron (NM_026993, intron 1 of 5)	intron (NM_026993, intron 1 of 5)	50189	NM_026993	69219	Mm.234247	NM_026993	ENSMUSG00000028194	Ddah1	2410006N07Rik|2510015N06Rik|AI987801|AW050362	dimethylarginine dimethylaminohydrolase 1	protein-coding
common_peak2-26936-22-24-0.00342791531268016-0.305461879681376	chr2	164431926	164433063	+	0	NA	intron (NM_001276432, intron 3 of 6)	MLT1E|LTR|MaLR	6392	NM_001276432	277343	Mm.383292	NM_001080550	ENSMUSG00000070533	Wfdc8	Gm706	WAP four-disulfide core domain 8	protein-coding
unique_peak2-38220-1-5--2.2120195109379-1.32905871926422	chr6	115007079	115007420	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-19357	NM_026894	68971	Mm.24937	NM_026894	ENSMUSG00000030316	Tamm41	1500001M20Rik|TAM41	TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)	protein-coding
unique_peak2-38158-7-6--0.00826409175941478-0.97990265578305	chr6	87183521	87183975	+	0	NA	intron (NM_054041, intron 12 of 17)	B1_Mm|SINE|Alu	102021	NM_054041	69538	Mm.232525	NM_054041	ENSMUSG00000033420	Antxr1	2310008J16Rik|2810405N18Rik|Antrx1|Tem8	anthrax toxin receptor 1	protein-coding
unique_peak2-39364-8-12--0.695217300193522-0.475924844171029	chr9	13247027	13247550	+	0	NA	Intergenic	Intergenic	12707	NR_028271	18689	Mm.41972	NM_008835		Phxr4	Sp5	per-hexamer repeat gene 4	ncRNA
common_peak1-15793-17-23--0.366666162516118-0.383878263347744	chr4	155784112	155784752	+	0	NA	Intergenic	Intergenic	-175466	NM_198305	231003	Mm.423038	NM_198305	ENSMUSG00000078484	Klhl17	AL022703|BC058738	kelch-like 17	protein-coding
common_peak2-20377-11-11--0.0762689164695427-0.301029995663976	chr10	17721597	17722315	+	0	NA	Intergenic	Intergenic	21102	NM_028440	73112	Mm.276041	NM_028440	ENSMUSG00000078453	Abracl	1700028I04Rik|3110003A17Rik	ABRA C-terminal like	protein-coding
common_peak1-13909-22-25--0.0531556130536872-0.301029995663976	chr2	80339732	80340867	+	0	NA	TTS (NM_016965)	TTS (NM_016965)	-52746	NM_011356	20378	Mm.427436	NM_011356	ENSMUSG00000027004	Frzb	Frp|Sfrp3|frezzled|fritz|frzb-1	frizzled-related protein	protein-coding
unique_peak1-566-15-2-2.4272022498345-3.53487848679804	chr1	195014238	195015179	+	0	NA	intron (NM_153137, intron 8 of 15)	MER2|DNA|MER2_type	13032	NM_153137	215243	Mm.261259	NM_153137	ENSMUSG00000037318	Traf3ip3	6030423D04Rik|AI115021|T3jam	TRAF3 interacting protein 3	protein-coding
common_peak1-8770-111-179--0.0741593049195064-0.340740377920127	chr11	6474320	6477003	+	0	NA	intron (NM_146014, intron 2 of 9)	(TG)n|Simple_repeat|Simple_repeat	15475	NM_001190344	216527	Mm.221271	NM_146014	ENSMUSG00000000378	Ccm2	BC029157	cerebral cavernous malformation 2	protein-coding
common_peak1-13560-57-36-1.05657967444998-3.60623125797087	chr2	6162262	6163863	+	0	NA	intron (NR_040333, intron 1 of 6)	B4A|SINE|B4	-29022	NM_024208	67856	Mm.38342	NM_024208	ENSMUSG00000039063	Echdc3	2310005D12Rik|AI662097	enoyl Coenzyme A hydratase domain containing 3	protein-coding
common_peak1-13930-12-8-0.478850983645327-0.562038191119709	chr2	85048065	85048639	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-11496	NM_001033346	241528	Mm.291095	NM_001033346	ENSMUSG00000075224	Lrrc55	A330097E02Rik|Gm351	leucine rich repeat containing 55	protein-coding
common_peak1-12178-23-25-0.0213277863679888-0.30528805757448	chr17	31511657	31512623	+	0	NA	Intergenic	RMER17C|LTR|ERVK	-11039	NM_008804	18585	Mm.10812	NM_008804	ENSMUSG00000041119	Pde9a	PDE9A1	phosphodiesterase 9A	protein-coding
common_peak1-8155-9-10--0.269818212233077-1.05503135781948	chr1	192136540	192137051	+	0	NA	Intergenic	Intergenic	-142236	NM_008937	19130	Mm.132579	NM_008937	ENSMUSG00000010175	Prox1	A230003G05Rik	prospero homeobox 1	protein-coding
common_peak2-22160-4-6--0.830815435910851-0.989110657569874	chr12	87266971	87267395	+	0	NA	intron (NM_001081423, intron 23 of 33)	intron (NM_001081423, intron 23 of 33)	101283	NM_001081423	320244	Mm.132172	NM_177114	ENSMUSG00000012609	Ttll5	1700048H13Rik|2310009M18Rik|4930556H18Rik|AI428864|D630041K24Rik|R75373|Stamp|mKIAA0998	tubulin tyrosine ligase-like family, member 5	protein-coding
unique_peak1-816-6-2-0.980435609659146-1.26211192963361	chr11	4661372	4661744	+	0	NA	Intergenic	Intergenic	-14777	NM_138948	192650	Mm.207056	NM_138948		Cabp7	-	calcium binding protein 7	protein-coding
unique_peak1-3848-15-4-1.69023665566829-1.97518968347063	chr2	5287397	5288138	+	0	NA	intron (NM_001290374, intron 2 of 9)	B4A|SINE|B4	228945	NM_028804	74186	Mm.274715	NM_028804	ENSMUSG00000026676	Ccdc3	2310045O21Rik	coiled-coil domain containing 3	protein-coding
unique_peak1-1795-10-8-0.186490343566457-1.078512453669	chr14	24232723	24233250	+	0	NA	intron (NM_001253371, intron 18 of 29)	L1Md_T|LINE|L1	-319193	NR_033550	791307	Mm.364384	NR_033550	ENSMUSG00000068680	Gm10248	ENSMUSG00000068680	predicted gene 10248	ncRNA
common_peak2-21630-23-24-0.0779113147343562-0.318406410381916	chr11	101082353	101083219	+	0	NA	intron (NM_007970, intron 1 of 20)	intron (NM_007970, intron 1 of 20)	4978	NM_007970	14055	Mm.5027	NM_007970	ENSMUSG00000006920	Ezh1	AW557915|mKIAA0388	enhancer of zeste homolog 1 (Drosophila)	protein-coding
common_peak1-8949-45-86--0.582585470503856-1.49084094315847	chr11	54437704	54438750	+	0	NA	intron (NM_175258, intron 9 of 27)	B3|SINE|B2	28579	NM_001252497	192786	Mm.254404	NM_175258	ENSMUSG00000037533	Rapgef6	A530068K01|AI844632|BB085664|C030018K18Rik|PDZ-GEF2|Pdzgef2|RA-GEF-2|Ragef2|mKIAA4052	Rap guanine nucleotide exchange factor (GEF) 6	protein-coding
unique_peak2-34643-7-5-0.214128329577033-1.01466476204226	chr14	101872565	101872944	+	0	NA	intron (NM_001081278, intron 10 of 18)	intron (NM_001081278, intron 10 of 18)	135654	NM_001081278	210789	Mm.320639	NM_173380	ENSMUSG00000033083	Tbc1d4	5930406J04Rik|A930035N22|AV295684|As160	TBC1 domain family, member 4	protein-coding
common_peak2-25653-15-11-0.4272022498345-0.503257505534083	chr19	10277544	10278115	+	0	NA	promoter-TSS (NM_026919)	promoter-TSS (NM_026919)	604	NM_007999	14156	Mm.2952	NM_007999	ENSMUSG00000024742	Fen1	AW538437|FEN-1	flap structure specific endonuclease 1	protein-coding
common_peak1-9996-95-53-1.39302784286055-9.45669592568513	chr13	72629781	72632393	+	0	NA	Intergenic	L1_Mus3|LINE|L1	134925	NR_030701	328287	Mm.235072	NR_030701		Gm20554	D430050G20	predicted gene, 20554	ncRNA
unique_peak2-32755-0-8--4.01005593191652-2.05605744720049	chr1	169729507	169729964	+	0	NA	intron (NM_033652, intron 3 of 7)	intron (NM_033652, intron 3 of 7)	110046	NM_033652	110648	Mm.330081	NM_033652	ENSMUSG00000026686	Lmx1a	Lmx1.1|dr|dreher|sst	LIM homeobox transcription factor 1 alpha	protein-coding
unique_peak2-39596-7-13--1.00826409175941-0.697979855752659	chr9	77544297	77544829	+	0	NA	Intergenic	L1Md_A|LINE|L1	-57779	NM_010295	14629	Mm.89888	NM_010295	ENSMUSG00000032350	Gclc	D9Wsu168e|GLCL-H|Ggcs-hs|Glclc	glutamate-cysteine ligase, catalytic subunit	protein-coding
common_peak2-32081-10-13--0.450939577048835-0.386243247519795	chr9	96478253	96479141	+	0	NA	intron (NM_053268, intron 7 of 23)	MIRc|SINE|MIR	53225	NM_053268	114713	Mm.124502	NM_053268	ENSMUSG00000032413	Rasa2	5430433H21Rik|AA517451|AU023900|GAP1m	RAS p21 protein activator 2	protein-coding
common_peak2-31690-159-294--0.162662056815115-0.651436403806316	chr8	128684814	128686721	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-136712	NM_175434	210027	Mm.405238	NM_175434	ENSMUSG00000057060	Slc35f3	B230375D17Rik	solute carrier family 35, member F3	protein-coding
unique_peak2-35109-6-12--1.13504160776079-1.45089835786865	chr16	23271332	23272137	+	0	NA	intron (NM_145933, intron 2 of 7)	intron (NM_145933, intron 2 of 7)	-18809	NM_001252506	20440	Mm.149029	NM_145933	ENSMUSG00000022885	St6gal1	AW742324|Siat1|St6Gal-I|St6gal|St6galI	beta galactoside alpha 2,6 sialyltransferase 1	protein-coding
common_peak1-15241-9-12--0.510826311736872-0.394412252720706	chr4	8691322	8691846	+	0	NA	intron (NM_001277149, intron 2 of 37)	intron (NM_001277149, intron 2 of 37)	74031	NM_001277149	320790	Mm.138792	NM_001033395	ENSMUSG00000041235	Chd7	A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis	chromodomain helicase DNA binding protein 7	protein-coding
unique_peak2-34625-3-8--1.58390809140159-1.39487600375387	chr14	76687490	76688013	+	0	NA	Intergenic	Intergenic	-127877	NM_207652	21807	Mm.153272	NM_009366	ENSMUSG00000022010	Tsc22d1	AA589566|AW105905|Egr5|TSC-22|Tgfb1i4|Tsc|Tsc22	TSC22 domain family, member 1	protein-coding
common_peak2-30774-35-79--0.890557836424859-2.64247392621752	chr7	126199697	126200575	+	0	NA	Intergenic	Intergenic	-61411	NM_001195774	64297	Mm.103439	NM_022420	ENSMUSG00000008734	Gprc5b	AW125761|Raig2	G protein-coupled receptor, family C, group 5, member B	protein-coding
common_peak1-10066-10-29--1.55047525059975-2.39922209159552	chr13	21834058	21834593	+	0	NA	Intergenic	RLTR21|LTR|ERVK	7360	NM_178210	319159	Mm.486099	NM_178210		Hist1h4j	-	histone cluster 1, H4j	protein-coding
common_peak1-18163-32-49--0.364764170555064-0.548322060310103	chr8	13338675	13339692	+	0	NA	intron (NM_009361, intron 1 of 11)	CpG	379	NM_009361	21781	Mm.925	NM_009361	ENSMUSG00000038482	Tfdp1	Dp1|Drtf1	transcription factor Dp 1	protein-coding
common_peak1-7554-48-54-0.189567437710155-0.451511310064814	chr1	38986736	38988523	+	0	NA	Intergenic	MLT1H|LTR|MaLR	-8365	NM_001011684	433292	Mm.333709	NM_001011684	ENSMUSG00000067604	Nms	AB164466	neuromedin S	protein-coding
unique_peak1-1997-10-0-3.35641534500877-3.31132995230379	chr15	85950311	85950877	+	0	NA	intron (NM_172611, intron 4 of 18)	intron (NM_172611, intron 4 of 18)	61437	NM_001205353	223752	Mm.24442	NM_172611	ENSMUSG00000035900	Gramd4	9930016O13	GRAM domain containing 4	protein-coding
common_peak2-30731-26-34--0.201383924786504-0.35535220421655	chr7	116093293	116093902	+	0	NA	Intergenic	Intergenic	15668	NM_025344	66085	Mm.182962	NM_025344		Eif3f	0610037M02Rik|AA409853|Eif3s5	eukaryotic translation initiation factor 3, subunit F	protein-coding
common_peak1-14493-18-31--0.687080848771648-0.820293215674341	chr3	10330806	10331751	+	0	NA	TTS (NM_001010834)	TTS (NM_001010834)	161	NM_018864	55980	Mm.183042	NM_018864	ENSMUSG00000027531	Impa1	2610002K09Rik|2900059K10Rik|AI325909	inositol (myo)-1(or 4)-monophosphatase 1	protein-coding
common_peak2-25500-10-13--0.450939577048835-0.386243247519795	chr19	5430068	5430684	+	0	NA	Intergenic	Intergenic	5232	NM_001256515	107242	Mm.329658	NM_134149	ENSMUSG00000047423	AI837181	Bles03|N28173	expressed sequence AI837181	protein-coding
common_peak1-12438-41-58--0.181494344513181-0.372131646957075	chr17	79020075	79021214	+	0	NA	intron (NM_028813, intron 11 of 13)	intron (NM_028813, intron 11 of 13)	113241	NM_028813	74199	Mm.292983	NM_028813	ENSMUSG00000024076	Vit	1700052E02Rik|1700110E08Rik|2810429K11Rik	vitrin	protein-coding
common_peak1-12369-47-84--0.474549511371154-1.09659900772475	chr17	65612422	65613894	+	0	NA	intron (NM_001289485, intron 15 of 15)	L1_Mur3|LINE|L1	276964	NM_001008973	381107	Mm.141275	NM_001008973	ENSMUSG00000045036	Tmem232	E130009J12Rik|Gm940|Tes13-L|Tes13-S	transmembrane protein 232	protein-coding
common_peak2-25871-11-16--0.578769256998726-0.503257505534083	chr19	43675039	43675703	+	0	NA	Intergenic	Intergenic	-11444	NM_008699	18089	Mm.56994	NM_008699	ENSMUSG00000044220	Nkx2-3	Nkx-2.3|Nkx2.3|tinman	NK2 homeobox 3	protein-coding
common_peak1-15859-17-25--0.482143379936054-0.479250674391597	chr5	3893493	3894323	+	0	NA	promoter-TSS (NM_001013023)	promoter-TSS (NM_001013023)	25	NM_001013023	545725	Mm.99593	NM_172135	ENSMUSG00000040429	Mterf1a	4931431L11Rik|9230106K09Rik|Mterf|Mterf1	mitochondrial transcription termination factor 1a	protein-coding
unique_peak1-5442-8-0-3.00522241794757-2.70926996097583	chr5	116420522	116421048	+	0	NA	intron (NM_007708, intron 25 of 46)	intron (NM_007708, intron 25 of 46)	53652	NM_031869	19079	Mm.458152	NM_031869	ENSMUSG00000029513	Prkab1	1300015D22Rik|AU021155|E430008F22	protein kinase, AMP-activated, beta 1 non-catalytic subunit	protein-coding
unique_peak2-37121-3-5--0.998945590680433-0.96108193396963	chr4	9661749	9661984	+	0	NA	Intergenic	RLTR10C|LTR|ERVK	-35866	NR_030693	320152	Mm.159946	NR_030693		4930412C18Rik	5730591J02Rik	RIKEN cDNA 4930412C18 gene	ncRNA
common_peak2-32282-14-8-0.729291158915332-0.771068449301682	chrX	19157738	19158231	+	0	NA	Intergenic	(TC)n|Simple_repeat|Simple_repeat	-433887	NR_029807	723828		NR_029807	miRBase:MI0000710	Mir222	Mirn222|mmu-mir-222	microRNA 222	ncRNA
common_peak1-12380-39-34-0.486478229974187-0.89292906939411	chr17	66351242	66352296	+	0	NA	intron (NM_001025572, intron 8 of 12)	intron (NM_001025572, intron 8 of 12)	-51242	NM_023053	65960	Mm.10153	NM_023053	ENSMUSG00000024098	Twsg1	1810013J15Rik|9030422N06Rik|AW552143|D17Ertd403e|Tsg|Twg	twisted gastrulation homolog 1 (Drosophila)	protein-coding
unique_peak1-7072-19-2-2.81772482594053-4.27364484827118	chr9	17030575	17031180	+	0	NA	Intergenic	(CAAAG)n|Simple_repeat|Simple_repeat	-848202	NM_001080814	270120	Mm.195010	NM_001080814	ENSMUSG00000074505	Fat3	9430076A06Rik|D430038H04Rik|Gm1132|Gm510|MFAT3F	FAT tumor suppressor homolog 3 (Drosophila)	protein-coding
common_peak1-7723-16-12-0.417823924126969-0.489164546851866	chr1	88429240	88429993	+	0	NA	Intergenic	B2_Mm2|SINE|B2	6305	NM_008972	19231	Mm.19187	NM_008972	ENSMUSG00000026238	Ptma	Thym	prothymosin alpha	protein-coding
unique_peak2-34925-5-6--0.511735258063458-0.947717972411649	chr15	85676073	85676495	+	0	NA	intron (NM_001033337, intron 7 of 13)	intron (NM_001033337, intron 7 of 13)	13550	NM_001033337	239570	Mm.151748	NM_001033337	ENSMUSG00000035944	Ttc38	9030019H09	tetratricopeptide repeat domain 38	protein-coding
common_peak1-10282-15-17--0.157760250886656-0.307611222530528	chr13	62466312	62467064	+	0	NA	Intergenic	MIRc|SINE|MIR	17846	NM_001162910	100041979	Mm.445930	NM_001162910		Gm3604	-	predicted gene 3604	protein-coding
unique_peak1-1401-9-1-2.18961340640422-2.31132995230379	chr12	70969871	70970361	+	0	NA	intron (NM_201519, intron 2 of 30)	B1_Mus2|SINE|Alu	-23976	NM_178628	73991	Mm.474462	NM_178628	ENSMUSG00000021066	Atl1	4930435M24Rik|Adfsp|Fsp1|Spg3|Spg3a	atlastin GTPase 1	protein-coding
common_peak2-26264-26-17-0.75797409071615-1.09210977391291	chr2	30445380	30446076	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-4836	NM_030137	78617	Mm.40413	NM_030137	ENSMUSG00000047363	Cstad	9530039B02Rik	CSA-conditional, T cell activation-dependent protein	protein-coding
unique_peak2-37274-5-12--1.40482005414695-1.62698961692433	chr4	115278241	115278651	+	0	NA	intron (NM_001100181, intron 3 of 12)	RLTR10-int|LTR|ERVK	4903	NM_001100181	100040843	Mm.482683	NM_001100181	ENSMUSG00000063929	Cyp4a32	OTTMUSG00000008689	cytochrome P450, family 4, subfamily a, polypeptide 32	protein-coding
common_peak2-22840-28-56--0.779930894343279-1.6064785466786	chr14	20929371	20930515	+	0	NA	Intergenic	ORR1A2|LTR|MaLR	-27549	NM_026209	67509	Mm.292423	NM_026209	ENSMUSG00000045107	Saysd1	1810063B07Rik|4930488P03Rik	SAYSVFN motif domain containing 1	protein-coding
unique_peak2-36466-2-5--1.50241675698448-1.08602067057793	chr2	143917293	143917648	+	0	NA	Intergenic	B3A|SINE|B2	58632	NM_207275	403171	Mm.389362	NM_207275	ENSMUSG00000037307	Banf2	4930517K23Rik|Baf-L|Baf-like|Gm115	barrier to autointegration factor 2	protein-coding
unique_peak1-3958-21-7-1.56948926526624-2.44150343356329	chr2	30699688	30700569	+	0	NA	promoter-TSS (NM_009116)	promoter-TSS (NM_009116)	-759	NM_009116	20204	Mm.1802	NM_009116	ENSMUSG00000039476	Prrx2	Prx2|S8	paired related homeobox 2	protein-coding
common_peak2-21550-11-31--1.49130641574839-2.45535166244229	chr11	96064582	96065932	+	0	NA	non-coding (NR_108029, exon 2 of 2)	non-coding (NR_108029, exon 2 of 2)	489	NR_108029	432593	Mm.342467	NR_108029		Gm11538	OTTMUSG00000001983	predicted gene 11538	ncRNA
common_peak1-14848-60-122--0.588222643718709-2.01523019401683	chr3	94836881	94838547	+	0	NA	intron (NM_008951, intron 7 of 9)	intron (NM_008951, intron 7 of 9)	8822	NM_001282017	19185	Mm.2261	NM_008951	ENSMUSG00000005625	Psmd4	Af1|Mcb1|angiocidin	proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	protein-coding
unique_peak2-37371-6-11--1.01956439034085-1.32595962126035	chr4	137853298	137853837	+	0	NA	intron (NM_001190978, intron 11 of 11)	GA-rich|Low_complexity|Low_complexity	-7086	NM_007838	13200	Mm.7236	NM_007838	ENSMUSG00000028757	Ddost	-	dolichyl-di-phosphooligosaccharide-protein glycotransferase	protein-coding
common_peak1-10198-51-104--0.639321692063549-2.05330344517492	chr13	45963168	45964463	+	0	NA	intron (NM_009124, intron 2 of 7)	intron (NM_009124, intron 2 of 7)	96545	NM_001199304	20238	Mm.342683	NM_009124	ENSMUSG00000046876	Atxn1	2900016G23Rik|Atx1|C85907|ENSMUSG00000074917|Gm10786|Sca1	ataxin 1	protein-coding
common_peak2-28697-17-16-0.130833496954699-0.356936432242225	chr5	33936456	33937208	+	0	NA	Intergenic	Intergenic	35452	NM_178390	74504	Mm.294695	NM_178390	ENSMUSG00000037339	Fam53a	2410018C17Rik|5430419M09Rik|Dntnp	family with sequence similarity 53, member A	protein-coding
unique_peak2-33082-3-8--1.58390809140159-1.39487600375387	chr10	80075650	80076152	+	0	NA	intron (NM_019575, intron 6 of 6)	B2_Mm2|SINE|B2	3896	NR_105877	102465550		NR_105877		Mir6912	mmu-mir-6912	microRNA mir-6912	ncRNA
common_peak2-25641-28-30-0.0987628094345876-0.332062764479303	chr19	9898760	9899578	+	0	NA	Intergenic	L1Md_F2|LINE|L1	74854	NM_016692	16319	Mm.29755	NM_016692	ENSMUSG00000024660	Incenp	2700067E22Rik|AU019509|C130081E20|C77457	inner centromere protein	protein-coding
unique_peak2-37411-2-5--1.50241675698448-1.08602067057793	chr4	146508675	146508943	+	0	NA	intron (NM_001083918, intron 2 of 6)	intron (NM_001083918, intron 2 of 6)	2607	NM_001083918	666532	Mm.392861	NM_001083918	ENSMUSG00000067916	Gm13139	OTTMUSG00000010657	predicted gene 13139	protein-coding
common_peak1-16399-23-12-1.02132778636799-1.44787515926925	chr5	124496733	124497661	+	0	NA	Intergenic	L2b|LINE|L2	-14928	NM_177876	330192	Mm.4079	NM_177876	ENSMUSG00000066278	Vps37b	2300007F24Rik|AI415429|BC026744	vacuolar protein sorting 37B (yeast)	protein-coding
common_peak1-17222-16-12-0.417823924126969-0.489164546851866	chr6	125539964	125540678	+	0	NA	intron (NM_011708, intron 8 of 51)	intron (NM_011708, intron 8 of 51)	37355	NM_011708	22371	Mm.22339	NM_011708	ENSMUSG00000001930	Vwf	6820430P06Rik|AI551257|B130011O06Rik|C630030D09|F8VWF|VWD	Von Willebrand factor homolog	protein-coding
common_peak2-29170-44-44-0.33003973823886-0.665385344403438	chr5	134455166	134457017	+	0	NA	Intergenic	RSINE1|SINE|B4	-119527	NM_030719	80909	Mm.45218	NM_030719		Gatsl2	7530428J21Rik|AW742413|Gats|Gatsl1	GATS protein-like 2	protein-coding
common_peak1-12754-70-57-0.761985921247827-2.68428829838238	chr18	60500720	60502394	+	0	NA	Intergenic	L1Md_F3|LINE|L1	-34126	NM_021792	60440	Mm.261140	NM_021792	ENSMUSG00000054072	Iigp1	2900074L10Rik|AI046432|AW111922|Ifgga1|Iigp|Irga6	interferon inducible GTPase 1	protein-coding
common_peak1-11710-21-21-0.110057646628938-0.344491671143527	chr16	32247203	32247747	+	0	NA	promoter-TSS (NM_173439)	promoter-TSS (NM_173439)	136	NM_026898	68980	Mm.159860	NM_026898	ENSMUSG00000022787	Wdr53	1500002B03Rik|AI848860	WD repeat domain 53	protein-coding
unique_peak2-39002-4-7--1.02346051385325-1.09384600808989	chr8	46780658	46781090	+	0	NA	intron (NM_172752, intron 2 of 22)	L1M2|LINE|L1	123777	NR_045739	319940	Mm.441720	NR_045739	ENSMUSG00000085440	Sorbs2os	D330022K07Rik	sorbin and SH3 domain containing 2, opposite strand	ncRNA
unique_peak1-615-11-6-0.701338662194009-1.32595962126035	chr10	22393198	22393894	+	0	NA	intron (NM_178934, intron 2 of 4)	intron (NM_178934, intron 2 of 4)	28729	NM_178934	353169	Mm.473705	NM_178934	ENSMUSG00000037490	Slc2a12	GLUT-12|Glut12	solute carrier family 2 (facilitated glucose transporter), member 12	protein-coding
common_peak1-17924-37-56--0.306896942678923-0.514261803374139	chr7	126791746	126792607	+	0	NA	intron (NM_054094, intron 6 of 13)	Lx6|LINE|L1	30834	NM_054094	117147	Mm.427560	NM_054094	ENSMUSG00000033533	Acsm1	Acas3|Bucs1|Macs	acyl-CoA synthetase medium-chain family member 1	protein-coding
common_peak1-16462-19-24--0.241168863113038-0.344491671143527	chr5	136565345	136566372	+	0	NA	intron (NM_133914, intron 2 of 20)	intron (NM_133914, intron 2 of 20)	6072	NM_001039103	54153	Mm.290655	NM_133914	ENSMUSG00000004952	Rasa4	AA793972|AW112107|BB079060|CAPRI|GAPL	RAS p21 protein activator 4	protein-coding
common_peak1-11943-27-308--3.27991707700914-56.5868167154246	chr17	4625907	4626641	+	0	NA	Intergenic	(CATTC)n|Simple_repeat|Simple_repeat	-368800	NM_001085355	239985	Mm.133401	NM_001085355	ENSMUSG00000069729	Arid1b	8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235	AT rich interactive domain 1B (SWI-like)	protein-coding
common_peak2-22480-64-103--0.234993316432488-0.557095317016001	chr13	48966617	48968975	+	0	NA	Intergenic	Intergenic	-1542	NM_011078	18676	Mm.486213	NM_011078	ENSMUSG00000038025	Phf2	GRC5	PHD finger protein 2	protein-coding
unique_peak1-5591-7-5-0.214128329577033-1.01466476204226	chr6	145882726	145883241	+	0	NA	intron (NM_010656, intron 1 of 2)	intron (NM_010656, intron 1 of 2)	316	NM_010656	16651	Mm.49689	NM_010656	ENSMUSG00000030255	Sspn	Krag	sarcospan	protein-coding
common_peak2-29470-23-17-0.551842503066768-0.713114929964887	chr6	30307386	30308053	+	0	NA	Intergenic	URR1B|DNA|MER1_type	33291	NM_172735	232679	Mm.29780	NM_172735	ENSMUSG00000039130	Zc3hc1	1110054L24Rik|AU018540|AU019789|HSPC216|Nipa	zinc finger, C3HC type 1	protein-coding
unique_peak2-36947-6-6--0.241956811677302-0.947717972411649	chr3	107733012	107733363	+	0	NA	intron (NM_026672, intron 5 of 7)	intron (NM_026672, intron 5 of 7)	1476	NM_026672	68312	Mm.458189	NM_026672	ENSMUSG00000004035	Gstm7	0610005A07Rik|AI894236|Cd203c	glutathione S-transferase, mu 7	protein-coding
unique_peak1-2083-8-4-0.683294323060208-1.21878474469819	chr15	36902938	36903432	+	0	NA	Intergenic	Intergenic	33972	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
common_peak1-10432-50-42-0.614675561776854-1.46887387725851	chr13	101539729	101541690	+	0	NA	intron (NM_021886, intron 4 of 8)	intron (NM_021886, intron 4 of 8)	5145	NM_021886	26886	Mm.273502	NM_021886	ENSMUSG00000045273	Cenph	1700021I11Rik|2410018A12Rik|2610042E16Rik|2810046K12Rik|AU044255|CENP-H|ENP	centromere protein H	protein-coding
common_peak1-14325-25-12-1.16141018720401-1.87883858401928	chr2	163590174	163591387	+	0	NA	Intergenic	Intergenic	-14805	NM_001272052	11486	Mm.388	NM_007398	ENSMUSG00000017697	Ada	-	adenosine deaminase	protein-coding
common_peak1-10507-16-20--0.274053780510699-0.353907621462756	chr14	75284333	75285101	+	0	NA	intron (NM_001033439, intron 1 of 19)	intron (NM_001033439, intron 1 of 19)	62967	NM_001252132	380916	Mm.288868	NM_001033439	ENSMUSG00000068015	Lrch1	4832412D13Rik|AI552548|AW215503|Chdc1|mKIAA1016	leucine-rich repeats and calponin homology (CH) domain containing 1	protein-coding
common_peak2-24271-11-9-0.186765489364251-0.344532117358383	chr16	94536640	94537073	+	0	NA	Intergenic	RCHARR1|DNA|MER1_type	-13173	NM_133229	170765	Mm.42604	NM_133229	ENSMUSG00000022941	Ripply3	Dscr6	ripply3 homolog (zebrafish)	protein-coding
unique_peak1-210-32-8-2.10916701777735-5.13708003886138	chr1	86491786	86493003	+	0	NA	Intergenic	Intergenic	1002991	NM_030194	109032	Mm.335802	NM_030194	ENSMUSG00000070034	Sp110	5031415C07Rik|52kDa|5830484A20Rik|ENSMUSG00000075603|Ifi75|Ipr1	Sp110 nuclear body protein	protein-coding
common_peak1-7926-13-18--0.469455482805817-0.409888142029227	chr1	143777236	143777953	+	0	NA	Intergenic	Intergenic	-1224615	NR_040604	75910	Mm.483845	NR_040604		4930590L20Rik	-	RIKEN cDNA 4930590L20 gene	ncRNA
unique_peak1-5427-10-0-3.35641534500877-3.31132995230379	chr5	113675179	113675782	+	0	NA	intron (NM_172718, intron 24 of 24)	ID_B1|SINE|B4	19551	NM_001033428	333048	Mm.332586	NM_001033428	ENSMUSG00000066964	Tmem211	Gm854	transmembrane protein 211	protein-coding
common_peak2-23002-16-17--0.0516613591742505-0.301029995663984	chr14	60418820	60419503	+	0	NA	intron (NM_015803, intron 27 of 35)	MLT1A1|LTR|MaLR	175043	NM_145463	219134	Mm.275409	NM_145463	ENSMUSG00000044461	Shisa2	9430059P22Rik|MAd2|Tmem46|mShisa|shisa	shisa homolog 2 (Xenopus laevis)	protein-coding
common_peak1-18441-18-17-0.142994149786039-0.353907621462753	chr8	81013946	81014753	+	0	NA	Intergenic	Intergenic	18478	NM_001252089	19656	Mm.24718	NM_009033	ENSMUSG00000037070	Rbmxl1	Hnrpg|Rbmx|Rbmxrt	RNA binding motif protein, X linked-like-1	protein-coding
unique_peak1-5127-7-1-1.79909083029819-1.80617997398389	chr5	3197639	3198165	+	0	NA	Intergenic	Intergenic	-146410	NM_009873	12571	Mm.31672	NM_009873	ENSMUSG00000040274	Cdk6	5830411I20|AI504062|Crk2	cyclin-dependent kinase 6	protein-coding
common_peak1-9456-30-16-1.08221256824153-2.01522565129858	chr11	103346217	103347430	+	0	NA	Intergenic	Intergenic	-72845	NM_183034	353047	Mm.383308	NM_183034	ENSMUSG00000034247	Plekhm1	AP162|B2|BC038943|D330036J23Rik	pleckstrin homology domain containing, family M (with RUN domain) member 1	protein-coding
common_peak1-10083-10-29--1.55047525059975-2.39922209159552	chr13	23574413	23574903	+	0	NA	exon (NM_001289615, exon 4 of 8)	exon (NM_001289615, exon 4 of 8)	6068	NM_001289615	238555	Mm.129668	NM_175938		Btn2a2	Btn2|D030063K05	butyrophilin, subfamily 2, member A2	protein-coding
common_peak1-13671-21-11-0.984526764545079-1.3750876294627	chr2	28467948	28468579	+	0	NA	intron (NM_001160406, intron 5 of 6)	CT-rich|Low_complexity|Low_complexity	9239	NM_008114	14582	Mm.373385	NM_008114	ENSMUSG00000026815	Gfi1b	Gfi-1B	growth factor independent 1B	protein-coding
unique_peak1-3224-6-1-1.5653981103803-1.56314192529759	chr18	60652710	60653193	+	0	NA	intron (NM_134133, intron 1 of 1)	intron (NM_134133, intron 1 of 1)	8686	NM_134133	106878	Mm.273197	NM_134133	ENSMUSG00000038059	Smim3	2010002N04Rik|AI195350|AW561905|Nid67|cI-41	small integral membrane protein 3	protein-coding
common_peak1-15524-10-9-0.0344872501214071-1.05503135781948	chr4	117886701	117887289	+	0	NA	intron (NM_011213, intron 22 of 32)	ID_B1|SINE|B4	-3826	NR_106085	102466820		NR_106085		Mir7226	mmu-mir-7226	microRNA mir-7226	ncRNA
unique_peak2-32999-4-11--1.6084230145744-1.68134727924692	chr10	60885915	60886336	+	0	NA	exon (NM_013611, exon 2 of 3)	exon (NM_013611, exon 2 of 3)	5405	NM_013611	18119	Mm.57195	NM_013611	ENSMUSG00000037171	Nodal	Tg.413d	nodal	protein-coding
common_peak1-8448-10-7-0.356415345008769-1.12966497611638	chr10	79701438	79701948	+	0	NA	intron (NM_023431, intron 9 of 13)	intron (NM_023431, intron 9 of 13)	-10504	NM_029272	75406	Mm.28712	NM_029272	ENSMUSG00000020153	Ndufs7	1010001M04Rik	NADH dehydrogenase (ubiquinone) Fe-S protein 7	protein-coding
unique_peak2-38123-9-17--0.980311595038092-0.844317084070804	chr6	83058002	83058714	+	0	NA	promoter-TSS (NM_026744)	promoter-TSS (NM_026744)	-744	NM_026744	68499	Mm.333183	NM_026744	ENSMUSG00000030037	Mrpl53	1110007K17Rik	mitochondrial ribosomal protein L53	protein-coding
common_peak2-30430-32-47--0.305870481501496-0.462861812831739	chr7	44495902	44497175	+	0	NA	Intergenic	Intergenic	2023366	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak1-15760-33-18-1.08341004908194-2.15925086250253	chr4	150807876	150809523	+	0	NA	intron (NM_001081557, intron 5 of 23)	intron (NM_001081557, intron 5 of 23)	-376637	NM_009498	22319	Mm.273930	NM_009498	ENSMUSG00000028955	Vamp3	D130027G05Rik|VAMP-3|ceb	vesicle-associated membrane protein 3	protein-coding
unique_peak2-38482-5-8--0.874305337448166-1.10484139239135	chr7	30729309	30729667	+	0	NA	intron (NM_178384, intron 1 of 4)	RLTR12B|LTR|ERVK	7424	NM_178384	72723	Mm.371648	NM_178384	ENSMUSG00000059975	Zfp74	2810054M15Rik|KRAB8|Zfp66|Znf569|mszf21|mszf77	zinc finger protein 74	protein-coding
common_peak2-21504-15-16--0.075298090694683-0.301029995663976	chr11	93967518	93968271	+	0	NA	intron (NM_001025430, intron 20 of 25)	intron (NM_001025430, intron 20 of 25)	62375	NM_001025429	70834	Mm.260737	NM_027569	ENSMUSG00000020859	Spag9	3110018C07Rik|4733401I23Rik|4831406C20Rik|AW552012|JLP|JSAP2|JSAP2a|Jip4|Mapk8ip4|syd1	sperm associated antigen 9	protein-coding
unique_peak1-2893-7-1-1.79909083029819-1.80617997398389	chr17	44707116	44707643	+	0	NA	intron (NR_073425, intron 5 of 5)	intron (NR_073425, intron 5 of 5)	165746	NR_073425	12393	Mm.391013	NM_009820	ENSMUSG00000039153	Runx2	AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a	runt related transcription factor 2	protein-coding
unique_peak1-4625-6-1-1.5653981103803-1.56314192529759	chr3	79197008	79197406	+	0	NA	intron (NM_001142953, intron 1 of 4)	L1MDa|LINE|L1	47909	NM_001142953	100233207	Mm.373801	NM_001142953	ENSMUSG00000091685	Gm17359	-	predicted gene, 17359	protein-coding
unique_peak1-3923-12-0-3.64877598508764-4.21441993929574	chr2	25627499	25628024	+	0	NA	Intergenic	Intergenic	-4776	NM_001100455	227630	Mm.27838	NM_001100455	ENSMUSG00000069080	Lcn11	Gm109	lipocalin 11	protein-coding
common_peak2-22838-12-6-0.841421063030034-1.58711810488664	chr14	20805563	20806070	+	0	NA	Intergenic	Intergenic	-9345	NM_001285909	14702	Mm.41737	NM_010315	ENSMUSG00000043004	Gng2	82	guanine nucleotide binding protein (G protein), gamma 2	protein-coding
unique_peak1-4712-8-3-1.00522241794757-1.39487600375387	chr3	103385446	103385939	+	0	NA	intron (NM_001276681, intron 1 of 7)	intron (NM_001276681, intron 1 of 7)	5643	NM_001276681	54524	Mm.88818	NM_018800	ENSMUSG00000027849	Syt6	3110037A08Rik|AW048930|sytVI	synaptotagmin VI	protein-coding
common_peak2-29525-10-9-0.0344872501214071-1.05503135781948	chr6	37431306	37431899	+	0	NA	Intergenic	RMER6C|LTR|ERVK	-39454	NM_178661	208647	Mm.169929	NM_178661		Creb3l2	BBF2H7|C530025K05Rik|SCIRR69	cAMP responsive element binding protein 3-like 2	protein-coding
common_peak2-29580-19-16-0.315224485411347-0.448200956659575	chr6	48509424	48510337	+	0	NA	intron (NM_177736, intron 2 of 2)	RLTR33|LTR|ERVK	5082	NM_177736	243371	Mm.290764	NM_177736	ENSMUSG00000073096	Lrrc61	BC027309	leucine rich repeat containing 61	protein-coding
unique_peak2-33565-1-7--2.62705701021674-1.80617997398389	chr11	84151999	84152334	+	0	NA	intron (NM_133360, intron 40 of 53)	intron (NM_133360, intron 40 of 53)	143226	NM_133360	107476	Mm.31374	NM_133360	ENSMUSG00000020532	Acaca	A530025K05Rik|Acac|Acc1|Gm738	acetyl-Coenzyme A carboxylase alpha	protein-coding
unique_peak1-4521-11-5-0.923731083530457-1.477227296591	chr3	30004821	30005314	+	0	NA	Intergenic	Intergenic	-92941	NM_007963	14013	Mm.56965	NM_007963	ENSMUSG00000027684	Mecom	D630039M04Rik|Evi-1|Evi1|Jbo|Mds|Mds1|Mds1-Evi1|Prdm3|Znfpr1b1	MDS1 and EVI1 complex locus	protein-coding
common_peak2-21557-26-27-0.120544170100858-0.335332249061431	chr11	96966680	96967817	+	0	NA	intron (NM_019507, intron 1 of 5)	B1_Mur2|SINE|Alu	9397	NM_019507	57765	Mm.94519	NM_019507	ENSMUSG00000001444	Tbx21	TBT1|Tbet|Tblym	T-box 21	protein-coding
unique_peak1-5801-18-3-2.31291915122835-3.35694334496952	chr6	66848738	66849623	+	0	NA	intron (NM_001177558, intron 1 of 4)	intron (NM_001177558, intron 1 of 4)	2295	NM_001177558	14701	Mm.234342	NM_025278	ENSMUSG00000036402	Gng12	2010305F15Rik|AA536815|AI115529|AI314170|AI842738	guanine nucleotide binding protein (G protein), gamma 12	protein-coding
common_peak1-16079-10-10--0.103016273628528-0.301029995663987	chr5	62765778	62766336	+	0	NA	Intergenic	L1_Mur3|LINE|L1	391359	NM_178407	212285	Mm.244403	NM_178407	ENSMUSG00000037999	Arap2	Centd1|Gm148|mKIAA0580	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2	protein-coding
common_peak1-14953-18-30--0.641277159158523-0.738267116931589	chr3	104358382	104359398	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-43111	NM_001025067	269473	Mm.34855	NM_001025067	ENSMUSG00000032913	Lrig2	4632419I10Rik|BB096938	leucine-rich repeats and immunoglobulin-like domains 2	protein-coding
common_peak2-25424-25-29--0.0450406902634128-0.301029995663982	chr19	3324774	3325578	+	0	NA	intron (NM_013495, intron 1 of 18)	CpG	1875	NM_013495	12894	Mm.18522	NM_013495	ENSMUSG00000024900	Cpt1a	C730027G07|CPTI|Cpt1	carnitine palmitoyltransferase 1a, liver	protein-coding
unique_peak2-34035-5-5--0.289342836727009-0.909929411522249	chr12	112587936	112588358	+	0	NA	intron (NM_183016, intron 1 of 36)	intron (NM_183016, intron 1 of 36)	27782	NM_183016	217866	Mm.27397	NM_183016	ENSMUSG00000021279	Cdc42bpb	MRCKb	CDC42 binding protein kinase beta	protein-coding
common_peak2-30057-38-64--0.450915153729924-0.799068699966534	chr6	128299911	128301403	+	0	NA	intron (NM_011657, intron 1 of 10)	B3A|SINE|B2	5212	NM_011657	22158	Mm.291783	NM_011657	ENSMUSG00000001521	Tulp3	2310022L06Rik|AI316887	tubby-like protein 3	protein-coding
unique_peak1-1465-29-14-1.20539948500659-2.32006591355686	chr12	110498922	110500016	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-191564	NR_033813	13386	Mm.157069	NM_010052	ENSMUSG00000040856	Dlk1	AW742678|DLK-1|DlkI|FA1|Ly107|Peg9|SCP1|ZOG|pG2|pref-1	delta-like 1 homolog (Drosophila)	protein-coding
common_peak1-12159-49-32-0.96188970366673-2.66218884881337	chr17	28930032	28931671	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	-7220	NM_001081315	268936	Mm.291877	NM_199061	ENSMUSG00000063952	Brpf3	AI413466|AW493400|mKIAA1286	bromodomain and PHD finger containing, 3	protein-coding
unique_peak1-2917-8-3-1.00522241794757-1.39487600375387	chr17	47954759	47955273	+	0	NA	intron (NM_001276390, intron 3 of 3)	intron (NM_001276390, intron 3 of 3)	15224	NM_001276391	17240	Mm.329100	NM_010783	ENSMUSG00000032717	Mdfi	I-mf|I-mfa	MyoD family inhibitor	protein-coding
unique_peak1-362-6-0-2.5653981103803-2.10720996964787	chr1	138815330	138815798	+	0	NA	intron (NM_001159769, intron 6 of 8)	intron (NM_001159769, intron 6 of 8)	34643	NM_001159769	26424	Mm.16794	NM_030676	ENSMUSG00000026398	Nr5a2	AU020803|D1Ertd308e|Ftf|LRH-1|UF2-H3B	nuclear receptor subfamily 5, group A, member 2	protein-coding
unique_peak2-39577-2-5--1.50241675698448-1.08602067057793	chr9	75402217	75402532	+	0	NA	intron (NM_016963, intron 1 of 9)	RSINE1|SINE|B4	5090	NM_016963	50875	Mm.38445	NM_016963	ENSMUSG00000058587	Tmod3	U-Tmod|UTMOD	tropomodulin 3	protein-coding
unique_peak2-34208-3-6--1.22133801201688-1.08602067057793	chr13	42306788	42307164	+	0	NA	Intergenic	Intergenic	-89663	NM_010104	13614	Mm.14543	NM_010104	ENSMUSG00000021367	Edn1	ET-1|preproET	endothelin 1	protein-coding
unique_peak1-2409-14-1-2.89921616035764-3.91338994363176	chr15	99389387	99390115	+	0	NA	Intergenic	Intergenic	-19736	NM_009699	11827	Mm.20206	NM_009699	ENSMUSG00000023013	Aqp2	AQP-CD|WCH-CD|cph|jpk	aquaporin 2	protein-coding
unique_peak2-36788-4-5--0.608423014574403-0.909929411522249	chr3	79557977	79558405	+	0	NA	Intergenic	Intergenic	-16475	NM_212452	381489	Mm.331086	NM_212452		Rxfp1	Gm1018|Lgr7	relaxin/insulin-like family peptide receptor 1	protein-coding
unique_peak1-6110-14-8-0.729291158915332-0.771068449301682	chr6	127056604	127057281	+	0	NA	intron (NM_177003, intron 1 of 5)	intron (NM_177003, intron 1 of 5)	2628	NM_177003	319801	Mm.101836	NM_177003	ENSMUSG00000038028	9630033F20Rik	AA793651|AI595337|C79710|C85509|Tigar	RIKEN cDNA 9630033F20 gene	protein-coding
common_peak1-11441-13-15--0.221527969362231-0.308519316180257	chr15	100551461	100552110	+	0	NA	promoter-TSS (NM_001161768)	promoter-TSS (NM_001161768)	-877	NM_001161768	207839	Mm.22969	NM_172451		Galnt6	4632410F13|AW047994|GalNAc-T6	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 6	protein-coding
common_peak2-25582-12-7-0.648775985087639-0.697979855752659	chr19	7240457	7240986	+	0	NA	intron (NM_134147, intron 3 of 10)	intron (NM_134147, intron 3 of 10)	40053	NM_134150	107260	Mm.203921	NM_134150	ENSMUSG00000024767	Otub1	AI850305	OTU domain, ubiquitin aldehyde binding 1	protein-coding
unique_peak1-4118-8-0-3.00522241794757-2.70926996097583	chr2	84637507	84637926	+	0	NA	Intergenic	Intergenic	-1269	NM_019949	56791	Mm.38261	NM_019949	ENSMUSG00000027078	Ube2l6	2810489I21Rik|RIG-B|UBCH8|Ubce8|Ubcm8	ubiquitin-conjugating enzyme E2L 6	protein-coding
common_peak1-15717-26-41--0.464418330620298-0.672592695851323	chr4	141287168	141288476	+	0	NA	Intergenic	Intergenic	-8488	NM_001017966	68817	Mm.393721	NM_001017966		Ddi2	1110056G13Rik|1700027M01Rik|9130022E05Rik|AI604911|AU040698	DNA-damage inducible protein 2	protein-coding
common_peak2-24320-23-47--0.863194996212076-1.63155726056134	chr17	66076183	66077087	+	0	NA	intron (NM_133685, intron 1 of 6)	intron (NM_133685, intron 1 of 6)	45457	NM_133685	106572	Mm.29274	NM_133685	ENSMUSG00000056515	Rab31	1700093E07Rik|AI415285|Rab22B	RAB31, member RAS oncogene family	protein-coding
common_peak1-7703-15-18--0.235762762887929-0.326591483156968	chr1	86153878	86154587	+	0	NA	Intergenic	Intergenic	-887091	NM_001037909	620078	Mm.386456	NM_175219	ENSMUSG00000052477	C130026I21Rik	4930565N07Rik|OTTMUSG00000029174	RIKEN cDNA C130026I21 gene	protein-coding
unique_peak1-947-7-0-2.79909083029819-2.40823996531185	chr11	57094153	57094568	+	0	NA	intron (NM_008165, intron 11 of 15)	MusHAL1|LINE|L1	237786	NM_001168667	67726	Mm.25632	NM_026342	ENSMUSG00000020523	Fam114a2	1810073G14Rik|9030624B09Rik	family with sequence similarity 114, member A2	protein-coding
common_peak2-26141-6-6--0.241956811677302-0.947717972411649	chr2	13523734	13524300	+	0	NA	Intergenic	RMER15-int|LTR|ERVL	28079	NM_011701	22352	Mm.268000	NM_011701	ENSMUSG00000026728	Vim	-	vimentin	protein-coding
common_peak2-25440-14-22--0.624345795699369-0.590343908676233	chr19	4012252	4012964	+	0	NA	exon (NM_133666, exon 1 of 10)	exon (NM_133666, exon 1 of 10)	147	NM_133666	17995	Mm.29842	NM_133666	ENSMUSG00000037916	Ndufv1	CI-51kD	NADH dehydrogenase (ubiquinone) flavoprotein 1	protein-coding
unique_peak1-5360-7-3-0.799090830298189-1.23214870625617	chr5	92827614	92828068	+	0	NA	intron (NM_181728, intron 4 of 9)	intron (NM_181728, intron 4 of 9)	-35519	NR_038116	56066	Mm.131723	NM_019494	ENSMUSG00000060183	Cxcl11	Cxc11|H174|I-tac|Ip9|Itac|Scyb11|Scyb9b|b-R1|betaR1	chemokine (C-X-C motif) ligand 11	protein-coding
unique_peak1-1569-8-4-0.683294323060208-1.21878474469819	chr13	31188989	31189456	+	0	NA	Intergenic	RMER17B|LTR|ERVK	-123306	NM_025588	66482	Mm.293510	NM_025588	ENSMUSG00000021357	Exoc2	2410030I24Rik|AI648199|Sec5|Sec5l1	exocyst complex component 2	protein-coding
common_peak1-13827-7-7--0.200909169701811-0.97990265578305	chr2	58562673	58563031	+	0	NA	intron (NM_001289660, intron 1 of 7)	intron (NM_001289660, intron 1 of 7)	-44743	NM_001289659	76654	Mm.200370	NM_029692	ENSMUSG00000026839	Upp2	1700124F02Rik|AI266885|UDRPASE2|UP2|UPASE2	uridine phosphorylase 2	protein-coding
common_peak2-23060-46-68--0.210528513529368-0.409674412769129	chr14	70598906	70600121	+	0	NA	intron (NM_001271407, intron 4 of 20)	RSINE1|SINE|B4	4917	NM_001271408	20410	Mm.5068	NM_011366	ENSMUSG00000022091	Sorbs3	SCAM-1|SH3P3|Sh3d4|vinexin-g	sorbin and SH3 domain containing 3	protein-coding
unique_peak2-34556-0-8--4.01005593191652-2.05605744720049	chr14	63860418	63860825	+	0	NA	intron (NM_008092, intron 1 of 6)	intron (NM_008092, intron 1 of 6)	3476	NM_008092	14463	Mm.247669	NM_008092	ENSMUSG00000021944	Gata4	Gata-4	GATA binding protein 4	protein-coding
unique_peak2-32578-5-9--1.02630843089322-1.21398586181642	chr1	87573515	87573970	+	0	NA	intron (NM_013673, intron 9 of 19)	intron (NM_013673, intron 9 of 19)	27117	NM_013673	20684	Mm.290906	NM_013673	ENSMUSG00000026222	Sp100	A430075G10Rik	nuclear antigen Sp100	protein-coding
unique_peak2-33698-5-11--1.28934283672701-1.477227296591	chr11	106193803	106194400	+	0	NA	intron (NM_133199, intron 13 of 23)	intron (NM_133199, intron 13 of 23)	16603	NM_133199	110880	Mm.432528	NM_133199	ENSMUSG00000001027	Scn4a	Nav1.4|SkM1|mH2	sodium channel, voltage-gated, type IV, alpha	protein-coding
common_peak2-30442-38-50--0.100972682672965-0.309893763698769	chr7	45016881	45017901	+	0	NA	Intergenic	Intergenic	1502513	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak1-1114-10-8-0.186490343566457-1.078512453669	chr11	94344413	94344869	+	0	NA	intron (NM_144827, intron 8 of 15)	intron (NM_144827, intron 8 of 15)	1983	NM_144827	217116	Mm.156123	NM_144827	ENSMUSG00000020867	Spata20	Tisp78	spermatogenesis associated 20	protein-coding
common_peak2-32333-13-47--1.80649047008339-4.3931316179841	chrX	74254562	74255605	+	0	NA	Intergenic	Intergenic	-406820	NM_001201395	74987	Mm.107996	NM_001201395	ENSMUSG00000079525	4930468A15Rik	-	RIKEN cDNA 4930468A15 gene	protein-coding
common_peak2-19635-19-22--0.120874629395327-0.306080386793804	chr1	39535686	39536531	+	0	NA	promoter-TSS (NM_018775)	promoter-TSS (NM_018775)	-516	NM_018775	54610	Mm.387293	NM_018775	ENSMUSG00000003134	Tbc1d8	AD3|HBLP1|VRP	TBC1 domain family, member 8	protein-coding
common_peak1-16655-41-37-0.453221191405075-0.852626677849445	chr6	113343275	113344859	+	0	NA	intron (NM_133923, intron 2 of 12)	intron (NM_133923, intron 2 of 12)	1576	NM_133923	101100	Mm.388573	NM_133923	ENSMUSG00000030276	Ttll3	4833441J24Rik|AI450050	tubulin tyrosine ligase-like family, member 3	protein-coding
common_peak1-15999-23-38--0.563634714353168-0.792515101870073	chr5	33628656	33629560	+	0	NA	Intergenic	Intergenic	-11455	NM_001198860	13016	Mm.7286	NM_013502	ENSMUSG00000037373	Ctbp1	BARS|CtBP1-L|CtBP1-S|CtBP3/BARS|D4S115h|D5H4S115|D5H4S115E	C-terminal binding protein 1	protein-coding
common_peak2-28576-21-39--0.752438829621127-1.08405458203116	chr5	8996391	8997758	+	0	NA	promoter-TSS (NM_023733)	promoter-TSS (NM_023733)	72	NM_023733	74114	Mm.28197	NM_023733	ENSMUSG00000003623	Crot	1200003H03Rik	carnitine O-octanoyltransferase	protein-coding
common_peak1-14336-11-10-0.0492619656143161-0.31137425193576	chr2	164522141	164522723	+	0	NA	Intergenic	Intergenic	-1569	NM_030058	78239	Mm.160060	NM_030058	ENSMUSG00000017310	Spint4	9230105I15Rik	serine protease inhibitor, Kunitz type 4	protein-coding
common_peak2-25241-8-11--0.579740082773585-1.14218153353838	chr18	64516691	64517097	+	0	NA	intron (NM_194268, intron 1 of 1)	HAL1-3A_ME|LINE|L1	16876	NM_194268	225631	Mm.234723	NM_194268	ENSMUSG00000045991	Onecut2	C730009D12|OC-2|Oc2	one cut domain, family member 2	protein-coding
unique_peak1-3169-10-2-1.77145284428761-2.09384600808989	chr18	38801277	38801793	+	0	NA	Intergenic	Arthur1B|DNA|Tip100	-40613	NM_011898	24066	Mm.42038	NM_011898	ENSMUSG00000024427	Spry4	A030006O18Rik|sprouty4	sprouty homolog 4 (Drosophila)	protein-coding
common_peak2-31276-26-31--0.0721009078415378-0.304589945962371	chr8	71701310	71702590	+	0	NA	Intergenic	Intergenic	-30995	NM_001013379	234358	Mm.334577	NM_001013379		Zfp930	-	zinc finger protein 930	protein-coding
common_peak2-28260-82-67-0.805800303055396-3.50030175129853	chr4	126255870	126256968	+	0	NA	intron (NM_175554, intron 16 of 25)	intron (NM_175554, intron 16 of 25)	19315	NR_106067	102465673		NR_106067		Mir7119	mmu-mir-7119	microRNA mir-7119	ncRNA
common_peak2-31002-19-24--0.241168863113038-0.344491671143527	chr8	10629054	10629957	+	0	NA	intron (NM_001081397, intron 35 of 35)	B4|SINE|B4	252949	NR_040705	320014	Mm.403203	NR_040705		B930025P03Rik	-	RIKEN cDNA B930025P03 gene	ncRNA
common_peak2-29792-20-24--0.155781405183531-0.319918318021793	chr6	89643915	89644598	+	0	NA	Intergenic	L1Md_A|LINE|L1	-19941	NM_053228	113855	Mm.377152	NM_053228	ENSMUSG00000096051	Vmn1r40	V1rb7	vomeronasal 1 receptor 40	protein-coding
common_peak2-31202-12-17--0.521149016354673-0.417187467413082	chr8	61270093	61270805	+	0	NA	intron (NM_175032, intron 1 of 11)	intron (NM_175032, intron 1 of 11)	-90856	NM_001177534	100271928	Mm.484123	NM_001177534		Gm15881	OTTMUSG00000027193	predicted gene 15881	protein-coding
common_peak1-13304-20-8-1.31814978314888-1.77631109801764	chr19	41445177	41445948	+	0	NA	intron (NM_031376, intron 2 of 16)	intron (NM_031376, intron 2 of 16)	13998	NM_031376	83490	Mm.222266	NM_031376	ENSMUSG00000025017	Pik3ap1	1810044J04Rik|BCAP	phosphoinositide-3-kinase adaptor protein 1	protein-coding
unique_peak1-2430-32-10-1.81966040058236-4.28341153583535	chr15	101234848	101236366	+	0	NA	Intergenic	Intergenic	-7227	NM_033073	110310	Mm.486285	NM_033073		Krt7	D15Wsu77e|K7|Krt2-7	keratin 7	protein-coding
unique_peak1-625-10-4-1.03448725012141-1.5150158574804	chr10	27982302	27982769	+	0	NA	intron (NM_008983, intron 2 of 31)	RSINE1|SINE|B4	187909	NM_008983	19272	Mm.332303	NM_008983	ENSMUSG00000019889	Ptprk	AI853699|PTPk|RPTPkappa	protein tyrosine phosphatase, receptor type, K	protein-coding
common_peak2-21078-81-71-0.702124601566253-2.77008210227588	chr11	50212069	50214095	+	0	NA	intron (NM_172557, intron 12 of 17)	intron (NM_172557, intron 12 of 17)	21861	NM_021510	59013	Mm.21740	NM_021510	ENSMUSG00000007850	Hnrnph1	AI642080|E430005G16Rik|Hnrnph|Hnrph1	heterogeneous nuclear ribonucleoprotein H1	protein-coding
unique_peak2-35092-12-22--0.874785970969374-0.809260849721102	chr16	18876876	18877871	+	0	NA	promoter-TSS (NM_010922)	promoter-TSS (NM_010922)	530	NM_010435	15260	Mm.15694	NM_010435	ENSMUSG00000022702	Hira	AA138857|D16Ertd95e|N28177|Tuple1	histone cell cycle regulation defective homolog A (S. cerevisiae)	protein-coding
common_peak1-13856-18-16-0.225456309978012-0.397739447719379	chr2	65225958	65226763	+	0	NA	Intergenic	Intergenic	-23903	NR_105755	102466151		NR_105755	miRBase:MI0021865	Mir6337	mmu-mir-6337	microRNA mir-6337	ncRNA
unique_peak2-34877-3-12--2.11442280810037-2.15846853396659	chr15	78926641	78927189	+	0	NA	Intergenic	Intergenic	-12498	NM_177461	27008	Mm.196480	NM_177461	ENSMUSG00000033039	Micall1	260|AI448246|D15Mit260|D15N2e|EST573322|EST820961|MIRab13|mKIAA1668	microtubule associated monooxygenase, calponin and LIM domain containing -like 1	protein-coding
common_peak2-23938-7-6--0.00826409175941478-0.97990265578305	chr16	13387189	13387580	+	0	NA	intron (NM_001122667, intron 8 of 16)	intron (NM_001122667, intron 8 of 16)	28870	NM_153588	239719	Mm.270643	NM_153588	ENSMUSG00000009569	Mkl2	ENSMUSG00000075401|Gt4-1|MRTF-B|Mrtfb|mKIAA1243	MKL/myocardin-like 2	protein-coding
common_peak1-7809-33-37-0.0834100490819436-0.326417267106726	chr1	119836392	119837638	+	0	NA	Intergenic	L1Md_F2|LINE|L1	370694	NM_011650	22099	Mm.426637	NM_011650	ENSMUSG00000026374	Tsn	2610034C24Rik|AU040286|C3PO|TB-RBP	translin	protein-coding
common_peak2-22027-35-54--0.349989455062156-0.572487971606931	chr12	59218638	59220275	+	0	NA	Intergenic	L1Md_F|LINE|L1	-93335	NM_009216	20605	Mm.278336	NM_009216		Sstr1	SRIF-2|SS-1-R|SS1-R|SS1R|Smstr-1|Smstr1|sst1	somatostatin receptor 1	protein-coding
common_peak1-18897-44-14-1.91500223896002-6.36547620157965	chr9	37231392	37232854	+	0	NA	intron (NM_001164767, intron 9 of 27)	intron (NM_001164767, intron 9 of 27)	8637	NM_001164767	19649	Mm.212826	NM_011248	ENSMUSG00000032128	Robo3	Rbig1|Rig-1|Rig1|Robo3a|Robo3b	roundabout homolog 3 (Drosophila)	protein-coding
common_peak1-10303-30-9-1.84774731460451-4.06788929322894	chr13	64421968	64423076	+	0	NA	Intergenic	Intergenic	-8504	NM_025370	66129	Mm.491110	NM_025370	ENSMUSG00000021482	Aaed1	1110018J18Rik|AI849003	AhpC/TSA antioxidant enzyme domain containing 1	protein-coding
common_peak1-12283-7-11--0.785871670422967-1.21681515183528	chr17	44767866	44768372	+	0	NA	intron (NR_073392, intron 6 of 7)	intron (NR_073392, intron 6 of 7)	105006	NR_073425	12393	Mm.391013	NM_009820	ENSMUSG00000039153	Runx2	AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a	runt related transcription factor 2	protein-coding
common_peak2-23223-43-43-0.323131566886405-0.62090566497527	chr15	5116440	5117456	+	0	NA	intron (NM_001013367, intron 3 of 8)	intron (NM_001013367, intron 3 of 8)	-18612	NM_026213	67515	Mm.254979	NM_026213	ENSMUSG00000022151	Ttc33	2410099M07Rik|2900001O04Rik|AI507072|AW538342|Osrf	tetratricopeptide repeat domain 33	protein-coding
common_peak2-23478-20-22--0.03548717146582-0.301029995663994	chr15	74702387	74703579	+	0	NA	Intergenic	Lx8|LINE|L1	9151	NM_025929	67038	Mm.154566	NM_025929	ENSMUSG00000063522	2010109I03Rik	-	RIKEN cDNA 2010109I03 gene	protein-coding
common_peak1-9853-107-122-0.411532427334156-1.64521370279812	chr12	80113603	80116590	+	0	NA	Intergenic	L1MC1|LINE|L1	-6832	NM_178745	268567	Mm.341747	NM_178745	ENSMUSG00000046157	Tmem229b	6330442E10Rik|9830138K24|AU019070	transmembrane protein 229B	protein-coding
unique_peak1-7223-7-4-0.477162735410827-1.09384600808989	chr9	70927845	70928283	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	82376	NM_001271843	64008	Mm.449427	NM_022026	ENSMUSG00000032204	Aqp9	1700020I22Rik|AI266899|AQP-9	aquaporin 9	protein-coding
unique_peak1-4821-7-6--0.00826409175941478-0.97990265578305	chr3	144718540	144719154	+	0	NA	Intergenic	L1Md_T|LINE|L1	-23107	NM_017474	23844	Mm.33483	NM_017474	ENSMUSG00000028255	Clca3	Clca1|Clca2|gob-5|gob5	chloride channel calcium activated 3	protein-coding
unique_peak1-1087-9-1-2.18961340640422-2.31132995230379	chr11	88049654	88050159	+	0	NA	Intergenic	ID4|SINE|ID	32016	NM_001291271	64656	Mm.168680	NM_024174	ENSMUSG00000023723	Mrps23	D11Bwg1153e|MRP-S23|Rpms23|S23mt	mitochondrial ribosomal protein S23	protein-coding
unique_peak2-39374-1-23--4.2120195109379-5.72042031892562	chr9	19575357	19575589	+	0	NA	Intergenic	L1Md_A|LINE|L1	-9254	NM_011001	18358	Mm.248950	NM_011001	ENSMUSG00000058659	Olfr58	IG6|MOR146-3|MOR146-7P	olfactory receptor 58	protein-coding
common_peak2-26246-47-61--0.0193548856203272-0.301029995663994	chr2	29711091	29712825	+	0	NA	Intergenic	Intergenic	-10711	NR_029838	723904		NR_029838	miRBase:MI0000741	Mir219a-2	Mir219-2|Mirn219-2|mmu-mir-219a-2	microRNA 219a-2	ncRNA
common_peak1-10497-59-92--0.213794810235453-0.482975456916967	chr14	25378106	25379640	+	0	NA	Intergenic	Intergenic	68970	NM_011297	20088	Mm.16775	NM_011297	ENSMUSG00000025290	Rps24	-	ribosomal protein S24	protein-coding
unique_peak1-893-18-3-2.31291915122835-3.35694334496952	chr11	33754404	33755164	+	0	NA	intron (NM_001190886, intron 1 of 7)	MTE2b-int|LTR|MaLR	-11199	NM_001290690	70357	Mm.252514	NM_027398	ENSMUSG00000053519	Kcnip1	KCHIP1|Kchip1.2	Kv channel-interacting protein 1	protein-coding
common_peak2-28702-94-98-0.500232947769707-1.91893359705942	chr5	34336371	34337447	+	0	NA	Intergenic	Intergenic	-1724	NM_001001985	269642	Mm.274610	NM_001001985	ENSMUSG00000048142	Nat8l	1110038O08Rik|Shati	N-acetyltransferase 8-like	protein-coding
common_peak2-32049-11-10-0.0492619656143161-0.31137425193576	chr9	83548323	83548824	+	0	NA	Intergenic	Intergenic	-36509	NR_046066	100039222	Mm.405596	NR_046066		Gm2109	-	predicted gene 2109	ncRNA
unique_peak2-37026-2-5--1.50241675698448-1.08602067057793	chr3	126920075	126920482	+	0	NA	Intergenic	Intergenic	56055	NR_105029	100862268	Mm.444603	NR_105029	ENSMUSG00000097456	LOC100862268	-	uncharacterized LOC100862268	ncRNA
common_peak2-30236-13-13--0.0288828914198356-0.309074325783021	chr7	4788952	4789729	+	0	NA	intron (NM_001290291, intron 1 of 4)	intron (NM_001290291, intron 1 of 4)	6958	NM_001290291	232813	Mm.44666	NM_172737	ENSMUSG00000053550	Shisa7	-	shisa homolog 7 (Xenopus laevis)	protein-coding
unique_peak2-34006-4-7--1.02346051385325-1.09384600808989	chr12	100724692	100725116	+	0	NA	Intergenic	Intergenic	-36620	NM_183186	71375	Mm.341972	NM_183186	ENSMUSG00000033713	Foxn3	5430426H20Rik|AA589593|AW556347|Ches1|Ches1l|HTLFL1	forkhead box N3	protein-coding
common_peak1-16995-24-21-0.333778284130419-0.518921928796332	chr6	88465374	88466167	+	0	NA	intron (NM_016906, intron 2 of 11)	intron (NM_016906, intron 2 of 11)	3024	NM_016906	53421	Mm.28375	NM_016906	ENSMUSG00000030082	Sec61a1	AA408394|AA410007|Sec61a	Sec61 alpha 1 subunit (S. cerevisiae)	protein-coding
unique_peak1-857-11-4-1.18676548936425-1.68134727924692	chr11	20476531	20477032	+	0	NA	intron (NM_021372, intron 1 of 1)	intron (NM_021372, intron 1 of 1)	33525	NM_021372	58172	Mm.339676	NM_021372	ENSMUSG00000049800	Sertad2	AB041541|AU021878|Kiaa0127|SEI-2|Sei2|TRIP-Br2|mKIAA0127	SERTA domain containing 2	protein-coding
common_peak1-12108-47-61--0.0193548856203272-0.301029995663994	chr17	26252598	26253790	+	0	NA	intron (NM_021793, intron 1 of 12)	intron (NM_021793, intron 1 of 12)	2933	NM_021793	60455	Mm.304656	NM_021793	ENSMUSG00000024180	Tmem8	AW490096|M83|Tmem8a	transmembrane protein 8 (five membrane-spanning domains)	protein-coding
common_peak1-12536-159-267--0.0241801030236832-0.304710476954971	chr18	3336334	3339006	+	0	NA	promoter-TSS (NM_001110852)	promoter-TSS (NM_001110852)	-83	NM_001110852	12916	Mm.5244	NM_013498	ENSMUSG00000063889	Crem	ICER|ICERI	cAMP responsive element modulator	protein-coding
unique_peak2-34083-4-8--1.19338551529556-1.21878474469819	chr13	6647098	6647507	+	0	NA	intron (NM_001291071, intron 1 of 21)	intron (NM_001291071, intron 1 of 21)	715	NM_019703	56421	Mm.273874	NM_019703	ENSMUSG00000021196	Pfkp	1200015H23Rik|9330125N24Rik|ATP-PFK|PFK-C|PFK-P	phosphofructokinase, platelet	protein-coding
common_peak2-28168-12-8-0.478850983645327-0.562038191119709	chr4	108578587	108579054	+	0	NA	intron (NM_023537, intron 2 of 4)	MIRb|SINE|MIR	27145	NM_023537	69908	Mm.41580	NM_023537	ENSMUSG00000003411	Rab3b	2610528C18Rik	RAB3B, member RAS oncogene family	protein-coding
unique_peak1-4855-9-7-0.18961340640422-1.05908390183068	chr4	137231905	137232427	+	0	NA	intron (NM_029563, intron 1 of 23)	intron (NM_029563, intron 1 of 23)	-5416	NM_001081155	110351	Mm.180763	NM_029563	ENSMUSG00000041351	Rap1gap	1300019I11Rik|2310004O14Rik|AI427470|ARPP-90|Rap1GAP1|Rap1ga1	Rap1 GTPase-activating protein	protein-coding
common_peak2-32032-9-7-0.18961340640422-1.05908390183068	chr9	77806480	77806855	+	0	NA	intron (NM_134255, intron 2 of 7)	intron (NM_134255, intron 2 of 7)	41495	NM_134255	68801	Mm.430736	NM_134255	ENSMUSG00000032349	Elovl5	1110059L23Rik|AI747313|AU043003|HELO1	ELOVL family member 5, elongation of long chain fatty acids (yeast)	protein-coding
unique_peak2-38258-5-7--0.704380336005853-1.01466476204226	chr6	125215613	125216055	+	0	NA	non-coding (NR_015527, exon 1 of 4)	non-coding (NR_015527, exon 1 of 4)	291	NR_015527	73870	Mm.440681	NR_015527		4930417O13Rik	-	RIKEN cDNA 4930417O13 gene	ncRNA
unique_peak1-3462-13-2-2.19350952991661-3.03832868024006	chr19	9897467	9898043	+	0	NA	Intergenic	L1Md_F2|LINE|L1	76268	NM_016692	16319	Mm.29755	NM_016692	ENSMUSG00000024660	Incenp	2700067E22Rik|AU019509|C130081E20|C77457	inner centromere protein	protein-coding
common_peak1-18710-10-11--0.228547155712387-0.31137425193576	chr8	122567469	122567939	+	0	NA	intron (NM_030209, intron 14 of 14)	B1F1|SINE|Alu	51334	NM_030209	78892	Mm.264680	NM_030209	ENSMUSG00000031825	Crispld2	1810049K24Rik|Lcrisp2|Lgl1|coffeecrisp	cysteine-rich secretory protein LCCL domain containing 2	protein-coding
unique_peak1-6735-16-4-1.7963355473807-2.18192634393779	chr8	45658617	45659275	+	0	NA	Intergenic	Lx9|LINE|L1	-376616	NM_001081286	14107	Mm.27365	NM_001081286	ENSMUSG00000070047	Fat1	2310038E12Rik|AU023433|Fath|mFat1	FAT tumor suppressor homolog 1 (Drosophila)	protein-coding
unique_peak1-5873-10-0-3.35641534500877-3.31132995230379	chr6	86084516	86085029	+	0	NA	Intergenic	HAL1|LINE|L1	56730	NM_001271859	11519	Mm.104155	NM_013458		Add2	2900072M03Rik|add97	adducin 2 (beta)	protein-coding
common_peak1-15256-13-16--0.30899081061257-0.330004445983672	chr4	16013956	16014431	+	0	NA	Intergenic	Intergenic	-73169	NM_145950	209212	Mm.46455	NM_145950	ENSMUSG00000041153	Osgin2	BC010311|C230027H09Rik	oxidative stress induced growth inhibitor family member 2	protein-coding
unique_peak2-37681-2-5--1.50241675698448-1.08602067057793	chr5	97024634	97025032	+	0	NA	intron (NM_175473, intron 15 of 73)	intron (NM_175473, intron 15 of 73)	-197571	NM_013470	11745	Mm.7214	NM_013470	ENSMUSG00000029484	Anxa3	Anx3	annexin A3	protein-coding
common_peak1-10247-31-59--0.681651924795395-1.40560368497292	chr13	54610782	54611815	+	0	NA	intron (NM_176987, intron 1 of 9)	intron (NM_176987, intron 1 of 9)	6132	NM_176987	319719	Mm.376151	NM_176987	ENSMUSG00000043183	Simc1	4732471D19Rik	SUMO-interacting motifs containing 1	protein-coding
common_peak1-9333-18-17-0.142994149786039-0.353907621462753	chr11	95800408	95801370	+	0	NA	Intergenic	Intergenic	23808	NR_037223	100526468		NR_037223	miRBase:MI0014025	Mir3063	mmu-mir-3063	microRNA 3063	ncRNA
unique_peak2-35544-7-17--1.37083417114412-1.23399803405144	chr17	57010573	57011306	+	0	NA	intron (NM_001039114, intron 2 of 14)	MTD|LTR|MaLR	2931	NM_001039114	328845	Mm.179421	NM_001039114	ENSMUSG00000024207	Acsbg2	Bgr	acyl-CoA synthetase bubblegum family member 2	protein-coding
unique_peak2-39495-5-13--1.51173525806346-1.78669045979184	chr9	59617388	59618007	+	0	NA	intron (NM_173018, intron 1 of 43)	intron (NM_173018, intron 1 of 43)	18716	NM_173018	270163	Mm.249545	NM_173018	ENSMUSG00000039585	Myo9a	4732465J09Rik|C130068I12Rik|C230003M11	myosin IXa	protein-coding
unique_peak2-32734-7-10--0.660340788339108-1.12966497611638	chr1	163381994	163382538	+	0	NA	Intergenic	Intergenic	-42522	NM_183391	240873	Mm.276823	NM_183391	ENSMUSG00000066755	Tnfsf18	Gitrl	tumor necrosis factor (ligand) superfamily, member 18	protein-coding
common_peak1-13916-125-117-0.741182329697709-4.77613151729938	chr2	84518640	84521348	+	0	NA	intron (NM_025885, intron 1 of 4)	PB1D7|SINE|Alu	-1009	NM_025868	66958	Mm.371621	NM_025868	ENSMUSG00000050043	Tmx2	2310042M24Rik|AA589631|Txndc14	thioredoxin-related transmembrane protein 2	protein-coding
common_peak2-23016-11-12--0.191746133889479-0.310474156842889	chr14	63122497	63123071	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-47658	NM_172810	239134	Mm.236557	NM_172810	ENSMUSG00000021933	Gucy1b2	B930025B03|GC-SB2	guanylate cyclase 1, soluble, beta 2	protein-coding
common_peak1-14505-15-22--0.511397205501357-0.50761186003982	chr3	19188062	19188778	+	0	NA	intron (NM_001122759, intron 1 of 12)	intron (NM_001122759, intron 1 of 12)	22902	NM_001122759	18583	Mm.355614	NM_008802	ENSMUSG00000069094	Pde7a	AU015378|AW047537	phosphodiesterase 7A	protein-coding
common_peak2-32114-61-80-0.042899326864716-0.313020397617402	chr9	101073069	101075227	+	0	NA	intron (NM_172144, intron 5 of 12)	L1MA5|LINE|L1	27255	NM_172144	235542	Mm.335386	NM_172144	ENSMUSG00000043154	Ppp2r3a	3222402P14Rik|A730042E07	protein phosphatase 2, regulatory subunit B'', alpha	protein-coding
common_peak1-14260-23-9-1.39983940962172-2.17218792383888	chr2	155804768	155805631	+	0	NA	intron (NM_177217, intron 20 of 33)	intron (NM_177217, intron 20 of 33)	22905	NM_177217	16328	Mm.288729	NM_008383	ENSMUSG00000038241	Cep250	AW490617|B230210E21Rik|Cep2|Inmp	centrosomal protein 250	protein-coding
unique_peak1-7124-9-1-2.18961340640422-2.31132995230379	chr9	47078334	47078809	+	0	NA	Intergenic	Intergenic	-259864	NM_207675	54725	Mm.234832	NM_018770	ENSMUSG00000032076	Cadm1	2900073G06Rik|3100001I08Rik|AI987920|Bl2|Igsf4|Igsf4a|Necl2|RA175|RA175A|RA175B|RA175C|RA175N|ST17|SgIGSF|SynCam|Tslc1	cell adhesion molecule 1	protein-coding
unique_peak1-5005-8-3-1.00522241794757-1.39487600375387	chr4	119425799	119426328	+	0	NA	Intergenic	Intergenic	-61220	NM_010657	16656	Mm.302758	NM_010657	ENSMUSG00000028634	Hivep3	2900056N03Rik|A130075N07|AI848000|E030045D18Rik|KBP-1|KBP1|Krc|Rc|Schnurri-3|Shn3|Zas3	human immunodeficiency virus type I enhancer binding protein 3	protein-coding
common_peak2-26490-38-62--0.405827264201386-0.688998294217078	chr2	83723998	83725307	+	0	NA	Intergenic	Intergenic	56731	NM_027964	71861	Mm.116957	NM_027964	ENSMUSG00000034552	Zswim2	1700025P14Rik|4933437F18Rik|MEX	zinc finger SWIM-type containing 2	protein-coding
common_peak2-22974-9-8-0.0196884049619079-1.03275496310833	chr14	54876142	54876631	+	0	NA	intron (NM_001205181, intron 1 of 6)	intron (NM_001205181, intron 1 of 6)	-2521	NM_134076	105501	Mm.28771	NM_134076	ENSMUSG00000040997	Abhd4	1110035H23Rik|AI429574|Abh4	abhydrolase domain containing 4	protein-coding
unique_peak2-35656-10-26--1.3984721571547-1.90052685918624	chr18	4634958	4635684	+	0	NA	intron (NM_001081963, intron 1 of 3)	CpG	394	NM_001081963	240185	Mm.33179	NM_001081963	ENSMUSG00000033960	9430020K01Rik	1110056P05Rik|Gm328|Jcad|mKIAA1462	RIKEN cDNA 9430020K01 gene	protein-coding
common_peak2-29683-15-14-0.105274154947137-0.330004445983672	chr6	72543994	72544806	+	0	NA	intron (NM_001253692, intron 2 of 11)	ID_B1|SINE|B4	4007	NM_144917	232089	Mm.167232	NM_144917	ENSMUSG00000056698	Elmod3	AI844780|C330008I15Rik|RBM29|Rbed1	ELMO/CED-12 domain containing 3	protein-coding
common_peak2-25565-10-7-0.356415345008769-1.12966497611638	chr19	6841513	6841860	+	0	NA	Intergenic	Intergenic	62748	NR_039555	100628576		NR_039555		Mir5046	mmu-mir-5046|mu-mir-5046	microRNA 5046	ncRNA
common_peak1-8363-34-69--0.7472144899437-1.74156632662937	chr10	59641837	59642816	+	0	NA	Intergenic	L1_Mus3|LINE|L1	39682	NM_016803	53374	Mm.12866	NM_016803	ENSMUSG00000057337	Chst3	C6ST|C6ST-1|GST-0	carbohydrate (chondroitin 6/keratan) sulfotransferase 3	protein-coding
unique_peak1-5502-11-3-1.50869358425161-1.95434855131066	chr5	135960837	135961357	+	0	NA	intron (NM_146001, intron 1 of 30)	intron (NM_146001, intron 1 of 30)	59895	NM_146001	215114	Mm.280805	NM_146001	ENSMUSG00000039959	Hip1	2610109B09Rik|A930014B11Rik|E130315I21Rik|mKIAA4113	huntingtin interacting protein 1	protein-coding
common_peak1-17127-96-55-1.35869629229772-9.25838371116404	chr6	115499438	115502890	+	0	NA	intron (NM_199033, intron 3 of 11)	(TG)n|Simple_repeat|Simple_repeat	6442	NM_199033	381802	Mm.291208	NM_199033	ENSMUSG00000042389	Tsen2	AU067695	tRNA splicing endonuclease 2 homolog (S. cerevisiae)	protein-coding
common_peak1-18570-8-5-0.420259917226415-1.10484139239135	chr8	105601117	105601631	+	0	NA	Intergenic	Intergenic	270060	NR_036588	69794	Mm.396139	NR_036588		1600027J07Rik	-	RIKEN cDNA 1600027J07 gene	ncRNA
common_peak2-29638-28-23-0.467996619100306-0.690880484874617	chr6	58595860	58596714	+	0	NA	intron (NM_011920, intron 1 of 15)	intron (NM_011920, intron 1 of 15)	49621	NM_011920	26357	Mm.333096	NM_011920	ENSMUSG00000029802	Abcg2	ABC15|ABCP|AI428558|BCRP|Bcrp1|MXR|MXR1	ATP-binding cassette, sub-family G (WHITE), member 2	protein-coding
common_peak1-10952-18-10-0.853487532591054-1.03889213727317	chr15	25636509	25637183	+	0	NA	intron (NM_019472, intron 3 of 40)	intron (NM_019472, intron 3 of 40)	84541	NM_019472	17909	Mm.60590	NM_019472	ENSMUSG00000022272	Myo10	AW048724|D15Ertd600e|mKIAA0799	myosin X	protein-coding
unique_peak1-3787-13-3-1.77847203063777-2.58603100924543	chr19	55877541	55878216	+	0	NA	intron (NM_001142920, intron 4 of 11)	MIRb|SINE|MIR	61578	NM_001142923	21416	Mm.139815	NM_009333	ENSMUSG00000024985	Tcf7l2	TCF4B|TCF4E|Tcf-4|Tcf4|mTcf-4B|mTcf-4E	transcription factor 7 like 2, T cell specific, HMG box	protein-coding
unique_peak1-4654-8-1-2.00522241794757-2.05605744720049	chr3	89439538	89440010	+	0	NA	intron (NM_080466, intron 3 of 7)	MLT1F2|LTR|MaLR	-79170	NM_001038587	56417	Mm.316628	NM_019655	ENSMUSG00000027951	Adar	AV242451|Adar1|Adar1p110|Adar1p150|mZaADAR	adenosine deaminase, RNA-specific	protein-coding
common_peak2-22957-32-49--0.364764170555064-0.548322060310103	chr14	52103430	52104068	+	0	NA	Intergenic	(T)n|Simple_repeat|Simple_repeat	32112	NM_009486	22301	Mm.482572	NM_009486	ENSMUSG00000070448	Vmn2r89	V2r10|V2r11	vomeronasal 2, receptor 89	protein-coding
unique_peak1-7231-9-1-2.18961340640422-2.31132995230379	chr9	74975386	74976072	+	0	NA	intron (NM_010864, intron 4 of 40)	MTEa|LTR|MaLR	56716	NM_010864	17918	Mm.3645	NM_010864	ENSMUSG00000034593	Myo5a	9630007J19Rik|AI413174|AI661011|Dbv|MVa|Myo5|MyoVA|Sev-1|d|d-120J|flail|flr	myosin VA	protein-coding
unique_peak1-87-9-1-2.18961340640422-2.31132995230379	chr1	43471782	43472298	+	0	NA	Intergenic	Intergenic	-30556	NM_010879	17974	Mm.389903	NM_010879	ENSMUSG00000066877	Nck2	4833426I10Rik|Grb4|NCKbeta|Nck-2	non-catalytic region of tyrosine kinase adaptor protein 2	protein-coding
common_peak1-14911-29-24-0.468433890840386-0.748982406290548	chr3	97901085	97901767	+	0	NA	intron (NM_010928, intron 5 of 33)	intron (NM_010928, intron 5 of 33)	-63309	NM_027665	71078	Mm.50711	NM_027665	ENSMUSG00000043468	Adam30	4933424D07Rik|svph4	a disintegrin and metallopeptidase domain 30	protein-coding
common_peak2-25889-13-22--0.745089925419244-0.690311289528838	chr19	45015970	45016947	+	0	NA	exon (NM_001081225, exon 5 of 20)	exon (NM_001081225, exon 5 of 20)	10849	NM_001081225	226151	Mm.212609	NM_172638	ENSMUSG00000036097	Fam178a	3632432H19|6030443O07Rik|AU014917	family with sequence similarity 178, member A	protein-coding
common_peak1-7460-55-21-1.7451882525154-7.10488953080622	chr1	91455436	91457183	+	0	NA	intron (NM_001037136, intron 1 of 16)	(TCC)n|Simple_repeat|Simple_repeat	104923	NM_001037136	347722	Mm.291135	NM_178119	ENSMUSG00000055013	Agap1	Centg2|Ggap1|R75364|mKIAA1099	ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	protein-coding
common_peak1-15734-13-14--0.12841856497075-0.301029995663977	chr4	148038946	148039611	+	0	NA	intron (NM_001085505, intron 6 of 10)	(TTTC)n|Simple_repeat|Simple_repeat	21852	NM_001085505	230909	Mm.332067	NM_001085505	ENSMUSG00000070577	Gm572	b2b1167Clo	predicted gene 572	protein-coding
common_peak1-17247-14-12-0.198776442216552-0.373562084705529	chr6	129180520	129181228	+	0	NA	Intergenic	RMER17C-int|LTR|ERVK	7189	NR_040265	76432	Mm.261738	NR_040265	ENSMUSG00000097354	2310001H17Rik	AI646108	RIKEN cDNA 2310001H17 gene	ncRNA
common_peak1-16819-88-114-0.169922358226158-0.502220138582521	chr6	48085441	48086844	+	0	NA	Intergenic	B3|SINE|B2	-49550	NM_001163475	69228	Mm.207555	NM_001163475	ENSMUSG00000057691	Zfp746	2810407L07Rik|AI317225|Znf746	zinc finger protein 746	protein-coding
unique_peak1-6278-8-2-1.42025991722641-1.65811743852845	chr7	28586654	28587090	+	0	NA	Intergenic	Intergenic	36180	NR_033484	100043229	Mm.458666	NR_033484		Gm10046	ENSMUSG00000058661	predicted gene 10046	ncRNA
unique_peak2-38709-6-7--0.434601889619698-0.97990265578305	chr7	110237758	110238184	+	0	NA	Intergenic	Intergenic	3937	NM_147054	259056	Mm.377813	NM_147054	ENSMUSG00000073959	Olfr584	MOR30-2	olfactory receptor 584	protein-coding
common_peak2-24325-18-26--0.441968350935117-0.471456499375593	chr17	78200112	78201004	+	0	NA	Intergenic	Intergenic	-399030	NM_015800	50766	Mm.311912	NM_015800	ENSMUSG00000024074	Crim1	AU015004	cysteine rich transmembrane BMP regulator 1 (chordin like)	protein-coding
common_peak2-24583-41-79--0.620779390038702-1.51813377769487	chr17	31564784	31565922	+	0	NA	intron (NM_008804, intron 4 of 18)	RLTR11A|LTR|ERVK	42174	NM_001163748	18585	Mm.10812	NM_008804	ENSMUSG00000041119	Pde9a	PDE9A1	phosphodiesterase 9A	protein-coding
common_peak2-22313-16-26--0.636623859895407-0.713114929964887	chr13	21453193	21453921	+	0	NA	Intergenic	MTB|LTR|MaLR	-1132	NM_016684	22758	Mm.24124	NM_016684	ENSMUSG00000036721	Zscan12	2510038J07Rik|FPM315|Zfp96|mKIAA0426	zinc finger and SCAN domain containing 12	protein-coding
common_peak1-13842-74-110--0.0785292893714988-0.326281951313147	chr2	60209296	60210628	+	0	NA	intron (NM_013825, intron 2 of 34)	intron (NM_013825, intron 2 of 34)	11326	NM_013825	17076	Mm.2074	NM_013825	ENSMUSG00000026980	Ly75	CD205|DEC-205|DEC205	lymphocyte antigen 75	protein-coding
common_peak1-15655-15-21--0.447266868081641-0.448200956659578	chr4	135678847	135679662	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-20483	NM_008321	15903	Mm.110	NM_008321		Id3	Hlh462|Idb3|bHLHb25	inhibitor of DNA binding 3	protein-coding
common_peak2-24628-9-10--0.269818212233077-1.05503135781948	chr17	34850370	34850872	+	0	NA	exon (NM_031176, exon 19 of 33)	exon (NM_031176, exon 19 of 33)	30221	NM_009780	12268	Mm.477109	NM_009780	ENSMUSG00000073418	C4b	C4|Ss	complement component 4B (Chido blood group)	protein-coding
unique_peak2-39331-11-7-0.508693584251613-1.21681515183528	chr8	126844127	126844580	+	0	NA	intron (NM_139272, intron 3 of 15)	ORR1A4|LTR|MaLR	89059	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
common_peak1-11477-29-57--0.745690914512461-1.45455780655082	chr15	102028157	102029029	+	0	NA	Intergenic	B3|SINE|B2	-5483	NM_001289694	68744	Mm.352945	NM_153194	ENSMUSG00000046897	Zfp740	1110034O07Rik|AW548228|Znf740	zinc finger protein 740	protein-coding
unique_peak2-37352-3-6--1.22133801201688-1.08602067057793	chr4	134128883	134129319	+	0	NA	intron (NM_207237, intron 8 of 11)	(TCCA)n|Simple_repeat|Simple_repeat	-5335	NR_105829	102465216		NR_105829		Mir6403	mmu-mir-6403	microRNA mir-6403	ncRNA
common_peak2-28578-77-168--0.616352856726187-2.94807022237528	chr5	9160676	9162688	+	0	NA	promoter-TSS (NM_011806)	promoter-TSS (NM_011806)	94	NM_001110327	23857	Mm.22480	NM_011806	ENSMUSG00000042508	Dmtf1	Dimp|Dmp1	cyclin D binding myb-like transcription factor 1	protein-coding
unique_peak2-36565-5-8--0.874305337448166-1.10484139239135	chr2	169751109	169751560	+	0	NA	Intergenic	Intergenic	144837	NR_033634	100043910	Mm.468546	NR_033632	ENSMUSG00000097065	A630075F10Rik	4831414D02|Gm4722	RIKEN cDNA A630075F10 gene	ncRNA
unique_peak2-32780-5-7--0.704380336005853-1.01466476204226	chr1	179485719	179486272	+	0	NA	Intergenic	Intergenic	87079	NR_037994	75589	Mm.86666	NR_037994		2310043L19Rik	-	RIKEN cDNA 2310043L19 gene	ncRNA
common_peak1-15638-32-39--0.0428360756677026-0.301029995663967	chr4	134482197	134483508	+	0	NA	exon (NM_023665, exon 5 of 5)	exon (NM_023665, exon 5 of 5)	3312	NM_023665	27981	Mm.331964	NM_023665	ENSMUSG00000037266	Rsrp1	2700043I21Rik|D4Ucla2|D4Wsu53e	arginine/serine rich protein 1	protein-coding
unique_peak2-39146-6-7--0.434601889619698-0.97990265578305	chr8	86888083	86888551	+	0	NA	Intergenic	MIR|SINE|MIR	-50946	NM_001252060	12286	Mm.334658	NM_007578	ENSMUSG00000034656	Cacna1a	APCA|BI|Caca1a|Cacnl1a4|Cav2.1|Ccha1a|EA2|FHM|HPCA|MHP|MHP1|SCA6|alpha1A|la|nmf352|rkr|tg	calcium channel, voltage-dependent, P/Q type, alpha 1A subunit	protein-coding
unique_peak1-1464-24-5-2.20824740204656-4.1393347358673	chr12	110497799	110498879	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-191912	NM_001163175	380785	Mm.342085	NM_001163175	ENSMUSG00000040867	Begain	BM948371|Gm897	brain-enriched guanylate kinase-associated	protein-coding
common_peak1-12457-49-46-0.451694971347546-0.943512743618327	chr17	83861413	83862790	+	0	NA	intron (NM_001286567, intron 19 of 23)	intron (NM_001286567, intron 19 of 23)	51572	NM_009187	20463	Mm.30072	NM_009187	ENSMUSG00000024248	Cox7a2l	COX7AR|COX7RP|EB1|SIG-81|SIG81|Silg81	cytochrome c oxidase subunit VIIa polypeptide 2-like	protein-coding
unique_peak1-5140-9-4-0.867685311516858-1.36011389749466	chr5	13402565	13403066	+	0	NA	intron (NM_001243072, intron 2 of 17)	intron (NM_001243072, intron 2 of 17)	3506	NM_009152	20346	Mm.372039	NM_009152	ENSMUSG00000028883	Sema3a	Hsema-I|SEMA1|SemD|Semad|coll-1	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A	protein-coding
common_peak2-27565-11-13--0.298661337805991-0.337263207250336	chr3	98024079	98024762	+	0	NA	Intergenic	Intergenic	-1659	NM_026328	67709	Mm.46306	NM_026328	ENSMUSG00000027876	Reg4	2010002L15Rik|GISP|RELP	regenerating islet-derived family, member 4	protein-coding
common_peak2-26602-62-76-0.143964918107184-0.410334955492133	chr2	113440097	113441557	+	0	NA	intron (NM_010230, intron 14 of 19)	intron (NM_010230, intron 14 of 19)	-84420	NM_001287818	14260	Mm.4938	NM_010230	ENSMUSG00000044042	Fmn1	Fmn|ld	formin 1	protein-coding
unique_peak1-4815-15-8-0.842239749113344-0.891319708951327	chr3	144143884	144144635	+	0	NA	intron (NM_011828, intron 1 of 6)	intron (NM_011828, intron 1 of 6)	88921	NM_011828	23908	Mm.12863	NM_011828	ENSMUSG00000040151	Hs2st1	AW214369|Hs2st|mKIAA0448	heparan sulfate 2-O-sulfotransferase 1	protein-coding
common_peak1-17383-43-52-0.054642730960504-0.319297110585539	chr7	128237401	128238553	+	0	NA	intron (NM_139310, intron 5 of 28)	intron (NM_139310, intron 5 of 28)	11025	NM_139310	246190	Mm.221073	NM_139310	ENSMUSG00000034990	Otoa	-	otoancorin	protein-coding
common_peak1-14212-57-48-0.65132319596372-1.77539305996384	chr2	150769802	150771822	+	0	NA	intron (NM_207204, intron 18 of 23)	intron (NM_207204, intron 18 of 23)	35482	NM_001163476	69270	Mm.271603	NM_027014	ENSMUSG00000027454	Gins1	2810418N01Rik|Gins4|PSF1|mKIAA0186	GINS complex subunit 1 (Psf1 homolog)	protein-coding
common_peak2-27879-16-22--0.405298313788951-0.440610794044987	chr4	74251936	74252785	+	0	NA	Intergenic	Intergenic	354577	NM_144787	76804	Mm.209059	NM_144787	ENSMUSG00000028397	Kdm4c	2410141F18Rik|AA517467|Gasc1|Jmjd2c	lysine (K)-specific demethylase 4C	protein-coding
common_peak1-16880-32-30-0.324895708832785-0.556669751231381	chr6	70823753	70825054	+	0	NA	intron (NM_010121, intron 2 of 16)	intron (NM_010121, intron 2 of 16)	29882	NM_010121	13666	Mm.247167	NM_010121	ENSMUSG00000031668	Eif2ak3	AI427929|Pek|Perk	eukaryotic translation initiation factor 2 alpha kinase 3	protein-coding
common_peak1-9670-66-105--0.209436790137357-0.487449105769037	chr12	4592512	4593826	+	0	NA	Intergenic	ORR1A2|LTR|MaLR	-6645	NM_001198969	20403	Mm.341204	NM_011365	ENSMUSG00000020640	Itsn2	AI327390|Ese2|Sh3d1B|Sh3p18|mKIAA1256	intersectin 2	protein-coding
unique_peak2-35604-2-9--2.23938235115068-1.87199725847353	chr17	80765482	80765794	+	0	NA	intron (NM_001145452, intron 10 of 17)	B1_Mur4|SINE|Alu	7244	NR_028385	791338	Mm.204722	NR_028385		Gm10190	ENSMUSG00000066938	predicted gene 10190	ncRNA
common_peak2-22552-14-15--0.100783839642355-0.301029995663982	chr13	62466292	62466954	+	0	NA	Intergenic	Intergenic	17911	NM_001162910	100041979	Mm.445930	NM_001162910		Gm3604	-	predicted gene 3604	protein-coding
unique_peak2-35593-8-16--1.08224042330277-0.891319708951328	chr17	78218667	78219293	+	0	NA	Intergenic	Intergenic	-380608	NM_015800	50766	Mm.311912	NM_015800	ENSMUSG00000024074	Crim1	AU015004	cysteine rich transmembrane BMP regulator 1 (chordin like)	protein-coding
common_peak2-29425-26-32--0.116495027199991-0.315041925765944	chr6	7692504	7693449	+	0	NA	Intergenic	Intergenic	-49794	NM_012055	27053	Mm.2942	NM_012055	ENSMUSG00000029752	Asns	-	asparagine synthetase	protein-coding
common_peak1-7831-17-18--0.0296311752385474-0.306899554715732	chr1	127868750	127869444	+	0	NA	intron (NM_176957, intron 12 of 12)	L1MA4A|LINE|L1	-60306	NM_145100	72585	Mm.490405	NM_145100		Lypd1	2700050C12Rik|AI853408|C530008O16Rik|Lynx2|Lypdc1	Ly6/Plaur domain containing 1	protein-coding
common_peak1-13914-53-67-0.0535101711655894-0.326210013932454	chr2	83723187	83725126	+	0	NA	Intergenic	Intergenic	57227	NM_027964	71861	Mm.116957	NM_027964	ENSMUSG00000034552	Zswim2	1700025P14Rik|4933437F18Rik|MEX	zinc finger SWIM-type containing 2	protein-coding
unique_peak1-3928-11-0-3.50869358425161-3.61235994796777	chr2	27212564	27213180	+	0	NA	intron (NM_009500, intron 2 of 27)	L1_Mus2|LINE|L1	69473	NM_009500	22325	Mm.179011	NM_009500	ENSMUSG00000009621	Vav2	2810040F13Rik|AI847175	vav 2 oncogene	protein-coding
unique_peak1-5373-17-1-3.21829633820504-4.59734841376773	chr5	99224351	99225154	+	0	NA	intron (NM_001024614, intron 5 of 5)	L1_Mus1|LINE|L1	-58706	NM_173404	110075	Mm.209571	NM_173404	ENSMUSG00000029335	Bmp3	9130206H07|9530029I04Rik	bone morphogenetic protein 3	protein-coding
common_peak2-23420-11-12--0.191746133889479-0.310474156842889	chr15	61531295	61531725	+	0	NA	non-coding (NR_040350, exon 5 of 5)	non-coding (NR_040350, exon 5 of 5)	74496	NR_040350	432956	Mm.404918	NR_040350		D030024E09Rik	-	RIKEN cDNA D030024E09 gene	ncRNA
common_peak1-7532-31-25-0.524798952672032-0.808568985218824	chr1	34121045	34122048	+	0	NA	intron (NM_134448, intron 1 of 97)	B2_Mm2|SINE|B2	-52658	NR_105861	102466987		NR_105861		Mir6896	mmu-mir-6896	microRNA mir-6896	ncRNA
common_peak1-13732-14-21--0.560215458279653-0.519193887192484	chr2	32287419	32288022	+	0	NA	intron (NM_001164357, intron 1 of 9)	B1_Mur4|SINE|Alu	-1049	NM_001164358	227731	Mm.37395	NM_146118	ENSMUSG00000026819	Slc25a25	1110030N17Rik|MCSC|mKIAA1896	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25	protein-coding
common_peak1-16859-59-64-0.302996187844124-0.687867803885541	chr6	55037116	55038803	+	0	NA	Intergenic	Intergenic	29948	NM_001288619	12922	Mm.236081	NM_009953	ENSMUSG00000003476	Crhr2	CRF-R2|CRFR2alpha|CRFR2beta|Crfr2	corticotropin releasing hormone receptor 2	protein-coding
common_peak2-25072-15-7-1.01216475055566-1.08658567012551	chr18	35093834	35094260	+	0	NA	Intergenic	B3|SINE|B2	-2390	NM_144866	225363	Mm.329353	NM_144866	ENSMUSG00000024360	Etf1	AI463371|D6Ertd109e|ERF|ERF1|SUP45L1|TB3-1	eukaryotic translation termination factor 1	protein-coding
unique_peak1-378-11-3-1.50869358425161-1.95434855131066	chr1	150210323	150210952	+	0	NA	Intergenic	L1_Mur2|LINE|L1	1597777	NM_008869	18783	Mm.4186	NM_008869	ENSMUSG00000056220	Pla2g4a	Pla2g4|cPLA2|cPLA2alpha	phospholipase A2, group IVA (cytosolic, calcium-dependent)	protein-coding
common_peak1-7774-46-53-0.143108441085333-0.395251503927856	chr1	93444852	93446109	+	0	NA	intron (NM_001039126, intron 3 of 4)	ORR1A2|LTR|MaLR	7823	NM_023046	65247	Mm.234152	NM_023046	ENSMUSG00000026311	Asb1	1700029O08Rik|1700054C17Rik|AI426616|AI851378|mKIAA1146	ankyrin repeat and SOCS box-containing 1	protein-coding
common_peak1-8750-9-8-0.0196884049619079-1.03275496310833	chr11	4336331	4336958	+	0	NA	intron (NM_029458, intron 1 of 10)	intron (NM_029458, intron 1 of 10)	4441	NM_029458	75828	Mm.159592	NM_029458	ENSMUSG00000020419	Hormad2	4930529M09Rik	HORMA domain containing 2	protein-coding
common_peak1-18221-9-18--1.05831410703937-0.965105923112245	chr8	25600692	25601335	+	0	NA	Intergenic	Intergenic	-51595	NM_026931	69068	Mm.25775	NM_026931	ENSMUSG00000056313	1810011O10Rik	1110065B09Rik|AW121743|AW321058	RIKEN cDNA 1810011O10 gene	protein-coding
unique_peak1-2398-14-3-1.89921616035764-2.80787975886178	chr15	98123093	98123609	+	0	NA	exon (NM_173769, exon 3 of 6)	exon (NM_173769, exon 3 of 6)	3163	NM_173769	239652	Mm.207453	NM_173769	ENSMUSG00000022987	Zfp641	9930016F01Rik|Znf641	zinc finger protein 641	protein-coding
common_peak2-29154-20-22--0.03548717146582-0.301029995663994	chr5	129669575	129670451	+	0	NA	intron (NM_001081342, intron 15 of 25)	intron (NM_001081342, intron 15 of 25)	67388	NM_001081342	243277	Mm.440501	NM_177734	ENSMUSG00000044017	Gpr133	E230012M21Rik	G protein-coupled receptor 133	protein-coding
common_peak2-29730-14-16--0.188246680892695-0.308035960714963	chr6	85068894	85069644	+	0	NA	intron (NM_001034902, intron 1 of 2)	intron (NM_001034902, intron 1 of 2)	6819	NM_001034902	545861	Mm.321419	NM_001034902	ENSMUSG00000072952	Gm5878	EG545861	predicted gene 5878	protein-coding
common_peak2-25220-8-6-0.197867495889966-1.03789460276074	chr18	61626123	61626419	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	17990	NR_045419	442846	Mm.417648	NR_045419		A530050N04Rik	-	RIKEN cDNA A530050N04 gene	ncRNA
common_peak2-27218-92-113-0.259462069538023-0.763017141132993	chr3	51224443	51225435	+	0	NA	intron (NM_053089, intron 1 of 19)	intron (NM_053089, intron 1 of 19)	5001	NM_053089	74838	Mm.275281	NM_053089	ENSMUSG00000063273	Naa15	5730450D16Rik|6330400I15|ASTBDN|Narg1|Tbdn-1|mNAT1	N(alpha)-acetyltransferase 15, NatA auxiliary subunit	protein-coding
unique_peak1-885-14-4-1.57728806547028-2.4322161449009	chr11	32361909	32362623	+	0	NA	intron (NM_173784, intron 1 of 2)	intron (NM_173784, intron 1 of 2)	6894	NM_173784	327900	Mm.260956	NM_173784		Ubtd2	4930571L24|9630054F20Rik|AI645720	ubiquitin domain containing 2	protein-coding
unique_peak2-37244-1-5--2.2120195109379-1.32905871926422	chr4	94614544	94614942	+	0	NA	intron (NM_177239, intron 19 of 19)	intron (NM_177239, intron 19 of 19)	-19209	NM_001290623	67753	Mm.25097	NM_027089	ENSMUSG00000028575	Eqtn	1700028B15Rik|4930579C15Rik|Afaf|C81058|Eqtl|Eqts	equatorin, sperm acrosome associated	protein-coding
common_peak2-24118-50-66--0.0251488739788197-0.30102999566397	chr16	33380127	33381536	+	0	NA	promoter-TSS (NM_011749)	promoter-TSS (NM_011749)	-9	NR_045709	100502742	Mm.217880	NR_045709	ENSMUSG00000097318	1700007L15Rik	-	RIKEN cDNA 1700007L15 gene	ncRNA
common_peak1-18999-85-106-0.213936261723505-0.607237392516043	chr9	59485343	59487297	+	0	NA	intron (NR_038074, intron 16 of 22)	B4|SINE|B4	-17855	NM_011099	18746	Mm.326167	NM_011099	ENSMUSG00000032294	Pkm	AA414905|AL024370|AL024424|Pk-2|Pk-3|Pk3|Pkm2	pyruvate kinase, muscle	protein-coding
unique_peak1-1138-6-2-0.980435609659146-1.26211192963361	chr11	96918504	96918941	+	0	NA	intron (NM_001081434, intron 12 of 22)	B1_Mus1|SINE|Alu	-6360	NR_106181	102465893		NR_106181		Mir8103	mmu-mir-8103	microRNA mir-8103	ncRNA
common_peak2-27416-27-38--0.293856267967013-0.412842868820461	chr3	88553011	88554070	+	0	NA	intron (NM_018804, intron 2 of 3)	intron (NM_018804, intron 2 of 3)	22981	NM_018804	229521	Mm.379376	NM_018804	ENSMUSG00000068923	Syt11	1500004A13Rik|3632445O20Rik|5430404N14Rik|6530420C11Rik|AI851970	synaptotagmin XI	protein-coding
common_peak2-28310-12-8-0.478850983645327-0.562038191119709	chr4	133104333	133104742	+	0	NA	Intergenic	ID4|SINE|ID	-2595	NM_010948	18221	Mm.69	NM_010948	ENSMUSG00000028851	Nudc	SIG-92|Silg92	nuclear distribution gene C homolog (Aspergillus)	protein-coding
common_peak1-12989-22-18-0.399356591643819-0.549581527953406	chr19	4211692	4212597	+	0	NA	Intergenic	Intergenic	-2248	NM_019952	56708	Mm.347919	NM_019952		Clcf1	Bsf3|CLC	cardiotrophin-like cytokine factor 1	protein-coding
common_peak2-21201-18-16-0.225456309978012-0.397739447719379	chr11	60878953	60879774	+	0	NA	promoter-TSS (NM_010603)	promoter-TSS (NM_010603)	57	NM_010603	16515	Mm.4970	NM_010603		Kcnj12	IRK-2|IRK2|Kir2.2|MB-IRK2	potassium inwardly-rectifying channel, subfamily J, member 12	protein-coding
common_peak2-29514-48-99--0.67292903853991-2.05279581805583	chr6	34780361	34781380	+	0	NA	intron (NM_178630, intron 14 of 18)	Lx4B|LINE|L1	-32276	NM_197986	68487	Mm.248440	NM_197986	ENSMUSG00000057137	Tmem140	1110007F12Rik	transmembrane protein 140	protein-coding
common_peak1-12702-17-22--0.305265617851975-0.348739088570342	chr18	44661786	44662575	+	0	NA	intron (NM_001085373, intron 6 of 18)	intron (NM_001085373, intron 6 of 18)	122026	NM_027490	70640	Mm.87629	NM_027490	ENSMUSG00000024472	Dcp2	2410015D23Rik|5730537H01Rik|AL118268	DCP2 decapping enzyme homolog (S. cerevisiae)	protein-coding
common_peak1-8412-9-3-1.18961340640422-1.57096726280955	chr10	71284377	71284908	+	0	NA	Intergenic	L1Md_A|LINE|L1	158796	NR_003644	108950	Mm.212793	NM_175390	ENSMUSG00000043859	1700049L16Rik	-	hematological and neurological expressed 1-like pseudogene	pseudo
common_peak1-18715-8-6-0.197867495889966-1.03789460276074	chr8	122799112	122799615	+	0	NA	Intergenic	Intergenic	-47233	NR_110496	434353	Mm.411793	NR_110496		A330074K22Rik	-	RIKEN cDNA A330074K22 gene	ncRNA
common_peak2-24131-29-35--0.0576349208272013-0.301029995663967	chr16	35021809	35023318	+	0	NA	promoter-TSS (NM_023587)	promoter-TSS (NM_023587)	56	NM_023587	70757	Mm.27286	NM_023587	ENSMUSG00000035376	Ptplb	6330408J20Rik|AI255777|AI481689|HACD2	protein tyrosine phosphatase-like (proline instead of catalytic arginine), member b	protein-coding
unique_peak1-4890-10-3-1.35641534500877-1.75805390616669	chr4	43730944	43731433	+	0	NA	Intergenic	Intergenic	-8882	NM_027511	100039781	Mm.18796	NM_027511		Hrct1	3830408D24Rik	histidine rich carboxyl terminus 1	protein-coding
common_peak1-13777-36-54--0.302038627356906-0.47894145157142	chr2	37422144	37423245	+	0	NA	TTS (NM_146121)	TTS (NM_146121)	50548	NM_177383	338346	Mm.445325	NM_177383		Gpr21	C230004C13Rik	G protein-coupled receptor 21	protein-coding
common_peak2-23260-16-23--0.466698858453094-0.497202060940027	chr15	25494108	25494852	+	0	NA	Intergenic	Intergenic	-57825	NM_019472	17909	Mm.60590	NM_019472	ENSMUSG00000022272	Myo10	AW048724|D15Ertd600e|mKIAA0799	myosin X	protein-coding
unique_peak1-5044-19-2-2.81772482594053-4.27364484827118	chr4	134068319	134069056	+	0	NA	intron (NM_001081099, intron 1 of 2)	B3A|SINE|B2	1773	NM_001081099	69885	Mm.141592	NM_001081099	ENSMUSG00000078521	Clhc1	2610002D18Rik|Aunip	clathrin heavy chain linker domain containing 1	protein-coding
unique_peak2-32486-5-8--0.874305337448166-1.10484139239135	chr1	36709394	36709904	+	0	NA	intron (NM_001126046, intron 3 of 14)	intron (NM_001126046, intron 3 of 14)	30379	NM_001126046	381337	Mm.17413	NM_027957	ENSMUSG00000046337	Fam178b	1700024G10Rik|Gm990	family with sequence similarity 178, member B	protein-coding
common_peak1-17196-38-26-0.816565157135062-1.74298885597579	chr6	124903770	124905122	+	0	NA	Intergenic	Intergenic	10969	NM_012003	26894	Mm.244536	NM_012003	ENSMUSG00000030127	Cops7a	D6Ertd35e	COP9 (constitutive photomorphogenic) homolog, subunit 7a (Arabidopsis thaliana)	protein-coding
common_peak2-26412-21-8-1.39956426382392-2.11898024768848	chr2	59670560	59671088	+	0	NA	intron (NM_001290659, intron 18 of 25)	MLT1G1|LTR|MaLR	49839	NM_001159636	72137	Mm.288734	NM_028118	ENSMUSG00000026988	Wdsub1	1700048E19Rik|2610014F08Rik	WD repeat, SAM and U-box domain containing 1	protein-coding
common_peak1-9430-98-151--0.0461588200130345-0.31268925805669	chr11	101657513	101658614	+	0	NA	Intergenic	Intergenic	-11439	NM_008815	18612	Mm.5025	NM_008815	ENSMUSG00000017724	Etv4	AW414408|Pea-3|Pea3	ets variant 4	protein-coding
common_peak1-8299-23-32--0.322626614849373-0.436052471002795	chr10	34417801	34418720	+	0	NA	Intergenic	ID4_|SINE|ID	215054	NM_010237	14302	Mm.332432	NM_010237	ENSMUSG00000019779	Frk	BSK|BSK/IYK|C85044|GTK|RAK	fyn-related kinase	protein-coding
common_peak2-28633-177-203-0.556060987456506-4.38849344379585	chr5	28316531	28318015	+	0	NA	Intergenic	MERVL-int|LTR|ERVL	-80679	NM_153526	231070	Mm.30221	NM_153526	ENSMUSG00000045294	Insig1	1810013C12Rik|Insig-1	insulin induced gene 1	protein-coding
unique_peak2-37309-12-30--1.30542032529924-1.80107744087172	chr4	124708501	124709712	+	0	NA	intron (NM_145552, intron 1 of 15)	MT2B|LTR|ERVL	1848	NM_145552	230737	Mm.90760	NM_145552	ENSMUSG00000028869	Gnl2	BC003262|HUMAUANTIG|Ngp-1	guanine nucleotide binding protein-like 2 (nucleolar)	protein-coding
common_peak2-30025-7-5-0.214128329577033-1.01466476204226	chr6	125330901	125331189	+	0	NA	promoter-TSS (NM_198604)	promoter-TSS (NM_198604)	-523	NM_198604	213522	Mm.333396	NM_198604	ENSMUSG00000038167	Plekhg6	BC026778|Gm155	pleckstrin homology domain containing, family G (with RhoGef domain) member 6	protein-coding
unique_peak2-36219-8-6-0.197867495889966-1.03789460276074	chr2	35334333	35334724	+	0	NA	Intergenic	Intergenic	-17583	NM_001145821	14594	Mm.281124	NM_010283	ENSMUSG00000035778	Ggta1	AW108479|GALT|Gal|Ggta|Ggta-1|alpha3GalT	glycoprotein galactosyltransferase alpha 1, 3	protein-coding
common_peak2-28381-66-109--0.262876049098819-0.613619973925068	chr4	138972393	138973761	+	0	NA	intron (NM_001160319, intron 31 of 105)	intron (NM_001160319, intron 31 of 105)	36503	NM_001160319	69116	Mm.271956	NM_001160319	ENSMUSG00000066036	Ubr4	1810009A16Rik|A930005E13Rik|D930005K06Rik|Gm1032|Gm1666|N28143|RBAF600|Zubr1|mKIAA0462|p600	ubiquitin protein ligase E3 component n-recognin 4	protein-coding
unique_peak2-38702-5-5--0.289342836727009-0.909929411522249	chr7	105640668	105641098	+	0	NA	Intergenic	Intergenic	-1849	NM_001113379	434215	Mm.323057	NM_001113379	ENSMUSG00000090958	Lrrc32	AI426318|D11S833Eh|D7H11S833E|EG434215|Garp	leucine rich repeat containing 32	protein-coding
unique_peak1-4606-11-4-1.18676548936425-1.68134727924692	chr3	65625745	65626352	+	0	NA	intron (NM_001166659, intron 12 of 12)	intron (NM_001166659, intron 12 of 12)	136099	NM_019937	56706	Mm.175612	NM_019937	ENSMUSG00000027829	Ccnl1	2610030E23Rik|AU018493|Ccnl|ania-6a	cyclin L1	protein-coding
common_peak2-32431-18-23--0.272043349492805-0.34651636097721	chrX	167232888	167233585	+	0	NA	Intergenic	Intergenic	-816387	NR_029457	654820	Mm.34441	NM_001039559	ENSMUSG00000072844	G530011O06Rik	-	RIKEN cDNA G530011O06 gene	ncRNA
unique_peak2-35148-8-6-0.197867495889966-1.03789460276074	chr16	32645931	32646358	+	0	NA	intron (NM_001110147, intron 1 of 13)	intron (NM_001110147, intron 1 of 13)	1415	NM_016788	51789	Mm.251115	NM_016788	ENSMUSG00000022791	Tnk2	Ack|Ack-1|Ack1|Cdgip|Pyk1	tyrosine kinase, non-receptor, 2	protein-coding
unique_peak2-32971-11-38--1.77670863461064-3.71898806998115	chr10	53596996	53597927	+	0	NA	Intergenic	Intergenic	-126746	NM_001081428	75906	Mm.436785	NM_001081428	ENSMUSG00000019856	Fam184a	3110012E06Rik|4930438C08Rik|4930589M24Rik	family with sequence similarity 184, member A	protein-coding
common_peak1-17804-10-4-1.03448725012141-1.5150158574804	chr7	100532733	100533290	+	0	NA	Intergenic	Intergenic	304622	NM_021427	58238	Mm.113787	NM_021427		Fam181b	A830059I20Rik|AB041569	family with sequence similarity 181, member B	protein-coding
common_peak2-27333-29-19-0.790361985727748-1.34608670144205	chr3	69046615	69047415	+	0	NA	Intergenic	B3A|SINE|B2	20674	NM_027843	71619	Mm.98122	NM_027843	ENSMUSG00000098207	Arl14	9130014L17Rik|Arf7	ADP-ribosylation factor-like 14	protein-coding
common_peak2-26894-66-63-0.518483664425841-1.48620083855261	chr2	157565960	157566906	+	0	NA	intron (NM_025680, intron 1 of 15)	intron (NM_025680, intron 1 of 15)	3296	NM_025680	66642	Mm.45193	NM_025680	ENSMUSG00000027649	Ctnnbl1	5730471K09Rik|NAP|NYD-SP19|P14L	catenin, beta like 1	protein-coding
unique_peak1-2003-7-0-2.79909083029819-2.40823996531185	chr15	3252836	3253204	+	0	NA	intron (NM_001166063, intron 1 of 8)	intron (NM_001166063, intron 1 of 8)	506	NM_001166063	100039139	Mm.455610	NM_001166063	ENSMUSG00000091119	Ccdc152	ENSMUSG00000071814	coiled-coil domain containing 152	protein-coding
common_peak2-22055-12-14--0.25811461052088-0.309074325783021	chr12	70554841	70555416	+	0	NA	Intergenic	Intergenic	21409	NR_038060	76062	Mm.380755	NR_038060		5830428M24Rik	100040862|Gm3007	RIKEN cDNA 5830428M24 gene	ncRNA
unique_peak1-1034-12-8-0.478850983645327-0.562038191119709	chr11	76586864	76587517	+	0	NA	Intergenic	L1MC4|LINE|L1	-10133	NM_016810	53334	Mm.20931	NM_016810	ENSMUSG00000010392	Gosr1	AI414660|AI426320|BB145494|GOS-28|GOSRI|GS28	golgi SNAP receptor complex member 1	protein-coding
common_peak2-28861-19-9-1.08075923177432-1.37307999835977	chr5	74143340	74143773	+	0	NA	Intergenic	Intergenic	100937	NM_178387	73472	Mm.87067	NM_178387	ENSMUSG00000029155	Spata18	1700067I02Rik	spermatogenesis associated 18	protein-coding
common_peak2-27995-7-12--0.901348887842903-1.31827279259406	chr4	44981550	44981963	+	0	NA	Intergenic	Intergenic	-12527	NM_080289	76238	Mm.196574	NM_080289	ENSMUSG00000035637	Grhpr	1110059D05Rik|6430629L09Rik	glyoxylate reductase/hydroxypyruvate reductase	protein-coding
unique_peak1-4049-10-1-2.35641534500877-2.57096726280955	chr2	59675014	59675586	+	0	NA	intron (NM_001290659, intron 22 of 25)	intron (NM_001290659, intron 22 of 25)	45363	NM_001159636	72137	Mm.288734	NM_028118	ENSMUSG00000026988	Wdsub1	1700048E19Rik|2610014F08Rik	WD repeat, SAM and U-box domain containing 1	protein-coding
unique_peak2-33367-3-5--0.998945590680433-0.96108193396963	chr11	32601818	32602263	+	0	NA	intron (NM_001271347, intron 2 of 12)	intron (NM_001271347, intron 2 of 12)	59485	NM_001271347	103583	Mm.28017	NM_134015	ENSMUSG00000020271	Fbxw11	2310065A07Rik|AA536858|BTRC2|BTRCP2|Fbxw1b|HOS	F-box and WD-40 domain protein 11	protein-coding
common_peak2-25051-18-10-0.853487532591054-1.03889213727317	chr18	32239679	32240202	+	0	NA	exon (NM_173441, exon 3 of 14)	exon (NM_173441, exon 3 of 14)	12552	NM_173441	73473	Mm.66853	NM_173441	ENSMUSG00000024384	Iws1	1700069O15Rik|3000008H23|AL117927|AW214353	IWS1 homolog (S. cerevisiae)	protein-coding
common_peak2-22586-24-33--0.294252938482622-0.390124689062463	chr13	69534786	69535634	+	0	NA	Intergenic	Intergenic	137532	NM_198600	210106	Mm.315959	NM_198600	ENSMUSG00000034575	Papd7	LAK-1|POLK|Pols|TRF4|TRF4-1	PAP associated domain containing 7	protein-coding
unique_peak2-36756-6-6--0.241956811677302-0.947717972411649	chr3	61409736	61410161	+	0	NA	Intergenic	Intergenic	241519	NM_028712	74012	Mm.422674	NM_028712	ENSMUSG00000036894	Rap2b	4021402C18Rik|AA408554	RAP2B, member of RAS oncogene family	protein-coding
common_peak1-10647-20-28--0.369906210536379-0.457753417732779	chr14	47276810	47277600	+	0	NA	Intergenic	(CAGAGA)n|Simple_repeat|Simple_repeat	-20107	NR_046460	74458	Mm.390708	NR_046460		4933425B07Rik	-	RIKEN cDNA 4933425B07 gene	ncRNA
common_peak1-8661-19-21--0.0567442919756109-0.301029995663971	chr10	128083047	128083986	+	0	NA	promoter-TSS (NM_011772)	promoter-TSS (NM_011772)	-467	NM_011772	22781	Mm.358648	NM_011772	ENSMUSG00000002578	Ikzf4	A630026H08Rik|Eos|Zfpn1a4|Znfn1a4	IKAROS family zinc finger 4	protein-coding
common_peak1-12688-20-13-0.680719862533589-0.809260849721102	chr18	38881067	38881954	+	0	NA	Intergenic	Intergenic	-120588	NM_011898	24066	Mm.42038	NM_011898	ENSMUSG00000024427	Spry4	A030006O18Rik|sprouty4	sprouty homolog 4 (Drosophila)	protein-coding
common_peak2-31627-30-42--0.256589345210225-0.401350871931209	chr8	123253667	123254868	+	0	NA	Intergenic	ORR1C2|LTR|MaLR	-6009	NM_008320	15900	Mm.334861	NM_008320	ENSMUSG00000041515	Irf8	AI893568|ICSBP|IRF-8|Icsbp1|Myls	interferon regulatory factor 8	protein-coding
unique_peak1-4950-19-0-4.40268732666169-NA	chr4	97521706	97522524	+	0	NA	intron (NM_010905, intron 2 of 10)	intron (NM_010905, intron 2 of 10)	77798	NM_010905	18027	Mm.31274	NM_010905	ENSMUSG00000028565	Nfia	1110047K16Rik|9430022M17Rik|CTF|NF1-A|NF1A	nuclear factor I/A	protein-coding
common_peak2-22288-16-21--0.341167976369236-0.392630012299441	chr13	13437887	13438744	+	0	NA	Intergenic	T-rich|Low_complexity|Low_complexity	47576	NM_031999	83924	Mm.379269	NM_031999	ENSMUSG00000021306	Gpr137b	AI788917|AU016435|AW546472|C730041E01|C80550|C80741|D13Abb1e|Tm7sf1	G protein-coupled receptor 137B	protein-coding
common_peak1-19295-18-18-0.0649916377847664-0.323898164595606	chr9	120866135	120867116	+	0	NA	intron (NM_001165902, intron 11 of 14)	intron (NM_001165902, intron 11 of 14)	2421	NR_106058	102465661		NR_106058		Mir7090	mmu-mir-7090	microRNA mir-7090	ncRNA
common_peak2-30698-14-6-1.09186123830004-1.16633110333236	chr7	111156396	111156730	+	0	NA	Intergenic	Intergenic	4651	NM_147084	259088	Mm.422750	NM_147084	ENSMUSG00000066263	Olfr639	MOR12-1	olfactory receptor 639	protein-coding
unique_peak1-2475-14-1-2.89921616035764-3.91338994363176	chr16	4026896	4027527	+	0	NA	Intergenic	Intergenic	-9934	NM_010061	13419	Mm.440565	NM_010061	ENSMUSG00000005980	Dnase1	AI788650|DNaseI|Dnl1	deoxyribonuclease I	protein-coding
common_peak2-21384-79-111-0.0214802451190161-0.309716142680059	chr11	79338813	79340344	+	0	NA	TTS (NM_001033711)	TTS (NM_001033711)	-2314	NM_001077496	216984	Mm.439665	NM_001077496		Evi2b	Evi-2|Evi2	ecotropic viral integration site 2b	protein-coding
unique_peak1-6650-7-2-1.21412832957703-1.45399745587252	chr8	11972705	11973177	+	0	NA	Intergenic	Intergenic	132420	NM_029326	75528	Mm.440342	NM_029326	ENSMUSG00000031512	Tex29	1700018L24Rik	testis expressed 29	protein-coding
common_peak1-17046-20-14-0.581184188982674-0.690311289528838	chr6	94657358	94658254	+	0	NA	Intergenic	B4A|SINE|B4	-7667	NM_008377	16206	Mm.245210	NM_008377	ENSMUSG00000030029	Lrig1	D6Bwg0781e|Img|LIG-1	leucine-rich repeats and immunoglobulin-like domains 1	protein-coding
common_peak1-17612-14-26--0.855671341805824-0.949797625454538	chr7	45395129	45395841	+	0	NA	Intergenic	Intergenic	1124419	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak2-24424-48-60-0.0401898136719279-0.316920393882012	chr17	17373694	17375084	+	0	NA	Intergenic	RMER10A|LTR|ERVL	116042	NM_011765	22759	Mm.436633	NM_011765	ENSMUSG00000095990	Zfp97	NGD16-4	zinc finger protein 97	protein-coding
common_peak2-30579-15-18--0.235762762887929-0.326591483156968	chr7	80207647	80208478	+	0	NA	Intergenic	Intergenic	38892	NR_046024	625243	Mm.261798	NR_046024		Gm6567	-	predicted gene 6567	ncRNA
unique_peak1-2295-26-8-1.75797409071615-3.2467506969819	chr15	80219170	80220053	+	0	NA	exon (NM_001044308, exon 32 of 37)	exon (NM_001044308, exon 32 of 37)	101943	NM_001044308	239556	Mm.291058	NM_001044308	ENSMUSG00000022416	Cacna1i	Ca(V)3.3	calcium channel, voltage-dependent, alpha 1I subunit	protein-coding
common_peak1-12407-13-13--0.0288828914198356-0.309074325783021	chr17	72835641	72836289	+	0	NA	intron (NM_007439, intron 1 of 28)	intron (NM_007439, intron 1 of 28)	117682	NM_007439	11682	Mm.311854	NM_007439	ENSMUSG00000055471	Alk	CD246|Tcrz	anaplastic lymphoma kinase	protein-coding
common_peak2-31577-53-81--0.216578992202155-0.443993257208683	chr8	119670410	119672043	+	0	NA	Intergenic	Intergenic	-10809	NM_001081151	209239	Mm.132992	NM_001081151	ENSMUSG00000052557	Gan	A330045G18|gigaxonin	giant axonal neuropathy	protein-coding
unique_peak2-32731-2-12--2.61789397440441-2.55640854263862	chr1	162313357	162313837	+	0	NA	intron (NM_013862, intron 18 of 20)	L1Md_F3|LINE|L1	-31895	NM_001038621	29809	Mm.25833	NM_013862	ENSMUSG00000026721	Rabgap1l	5830411O09Rik|8430421H08Rik|9630005B12Rik|AW049894|HHL|Hh1|mKIAA0471	RAB GTPase activating protein 1-like	protein-coding
unique_peak2-38251-2-5--1.50241675698448-1.08602067057793	chr6	124918287	124918603	+	0	NA	Intergenic	Intergenic	-2898	NM_001164089	26894	Mm.244536	NM_012003	ENSMUSG00000030127	Cops7a	D6Ertd35e	COP9 (constitutive photomorphogenic) homolog, subunit 7a (Arabidopsis thaliana)	protein-coding
unique_peak2-33920-5-10--1.16381195464315-1.33892459842472	chr12	69503519	69503858	+	0	NA	Intergenic	CT-rich|Low_complexity|Low_complexity	-733430	NR_033146	100316870	Mm.379794	NR_033146		Gm17821	-	DDB1 and CUL4 associated factor 5 pseudogene	pseudo
unique_peak1-5957-7-1-1.79909083029819-1.80617997398389	chr6	92331047	92331569	+	0	NA	intron (NM_001081146, intron 8 of 8)	intron (NM_001081146, intron 8 of 8)	100078	NM_001134460	243548	Mm.248820	NM_001081146	ENSMUSG00000030020	Prickle2	6230400G14Rik|6720451F06Rik|mpk2	prickle homolog 2 (Drosophila)	protein-coding
unique_peak1-1272-15-8-0.842239749113344-0.891319708951327	chr11	117829951	117830812	+	0	NA	5' UTR (NM_007707, exon 1 of 2)	5' UTR (NM_007707, exon 1 of 2)	299	NM_007707	12702	Mm.3468	NM_007707	ENSMUSG00000053113	Socs3	Cis3|Cish3|EF-10|Ef10|SSI-3|Ssi3	suppressor of cytokine signaling 3	protein-coding
unique_peak2-37041-6-13--1.2419568116773-1.58711810488664	chr3	132984613	132985044	+	0	NA	intron (NM_146141, intron 2 of 11)	intron (NM_146141, intron 2 of 11)	11754	NM_146141	74776	Mm.210305	NM_146141	ENSMUSG00000028013	Ppa2	1110013G13Rik|Sid6306	pyrophosphatase (inorganic) 2	protein-coding
common_peak2-25556-72-67-0.581120971621979-1.88647548383689	chr19	6278342	6279570	+	0	NA	intron (NM_010119, intron 1 of 4)	intron (NM_010119, intron 1 of 4)	2060	NM_010119	13660	Mm.30169	NM_010119	ENSMUSG00000024772	Ehd1	AA409636|Past1|RME-1	EH-domain containing 1	protein-coding
common_peak2-30249-6-7--0.434601889619698-0.97990265578305	chr7	7171443	7171774	+	0	NA	intron (NR_003555, intron 6 of 6)	L1Md_T|LINE|L1	-8899	NM_145577	232855	Mm.360403	NM_145577	ENSMUSG00000066838	Zfp772	-	zinc finger protein 772	protein-coding
unique_peak2-32752-4-5--0.608423014574403-0.909929411522249	chr1	168426720	168427154	+	0	NA	intron (NM_001164306, intron 1 of 7)	RLTR11A2|LTR|ERVK	782	NM_001164306	226601	Mm.475593	NM_001164306	ENSMUSG00000086056	Gm4846	EG226601|Fmo13	predicted gene 4846	protein-coding
common_peak2-22465-19-42--1.02357742804041-1.85054049304327	chr13	45965045	45966177	+	0	NA	intron (NM_009124, intron 2 of 7)	MTD|LTR|MaLR	94749	NM_001199304	20238	Mm.342683	NM_009124	ENSMUSG00000046876	Atxn1	2900016G23Rik|Atx1|C85907|ENSMUSG00000074917|Gm10786|Sca1	ataxin 1	protein-coding
common_peak2-30638-16-24--0.525592547506663-0.561823156887258	chr7	98165054	98165638	+	0	NA	Intergenic	Lx5|LINE|L1	-73950	NM_011807	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
unique_peak2-39267-2-5--1.50241675698448-1.08602067057793	chr8	120318316	120318648	+	0	NA	exon (NM_026758, exon 3 of 5)	exon (NM_026758, exon 3 of 5)	7347	NM_026758	68533	Mm.181836	NM_026758	ENSMUSG00000031843	Mphosph6	1110001M01Rik|AA536809|C86426	M phase phosphoprotein 6	protein-coding
unique_peak1-5869-9-3-1.18961340640422-1.57096726280955	chr6	85382477	85382949	+	0	NA	intron (NM_144918, intron 1 of 12)	B1_Mur2|SINE|Alu	743	NM_144918	232187	Mm.219946	NM_144918	ENSMUSG00000033706	Smyd5	AW536703|NN8-4AG|Rai15|Rrg1	SET and MYND domain containing 5	protein-coding
unique_peak2-38038-9-13--0.617741515653384-0.459837087125828	chr6	38753321	38753854	+	0	NA	intron (NM_001294144, intron 2 of 14)	intron (NM_001294144, intron 2 of 14)	33723	NM_001136065	15258	Mm.23790	NM_010433	ENSMUSG00000061436	Hipk2	1110014O20Rik|B230339E18Rik|Stank	homeodomain interacting protein kinase 2	protein-coding
unique_peak2-37481-2-8--2.08737925770563-1.65811743852845	chr5	4245905	4246274	+	0	NA	Intergenic	LTR78|LTR|ERV1	53722	NM_001042670	208595	Mm.129815	NM_001042670	ENSMUSG00000053178	Mterf1b	ENSMUSG00000053178|Gm9897	mitochondrial transcription termination factor 1b	protein-coding
unique_peak2-38006-2-9--2.23938235115068-1.87199725847353	chr6	30401806	30402235	+	0	NA	3' UTR (NM_029742, exon 10 of 10)	3' UTR (NM_029742, exon 10 of 10)	50111	NM_029742	76788	Mm.277308	NM_029742	ENSMUSG00000029775	Klhdc10	2410127E18Rik|AI593221|mKIAA0265	kelch domain containing 10	protein-coding
common_peak2-29970-36-32-0.434926966809301-0.779916249636873	chr6	119902334	119903362	+	0	NA	exon (NM_198703, exon 12 of 28)	exon (NM_198703, exon 12 of 28)	50132	NM_001166381	19365	Mm.149	NM_011236	ENSMUSG00000030166	Rad52	Rad52yh	RAD52 homolog (S. cerevisiae)	protein-coding
unique_peak2-37169-4-7--1.02346051385325-1.09384600808989	chr4	45528870	45529321	+	0	NA	intron (NM_001033306, intron 1 of 5)	intron (NM_001033306, intron 1 of 5)	14605	NM_001033306	230126	Mm.251716	NM_001033306	ENSMUSG00000044813	Shb	BC028832	src homology 2 domain-containing transforming protein B	protein-coding
common_peak2-19533-81-87-0.412617984371268-1.26251575835354	chr1	86064207	86065587	+	0	NA	Intergenic	Intergenic	-797756	NM_001037909	620078	Mm.386456	NM_175219	ENSMUSG00000052477	C130026I21Rik	4930565N07Rik|OTTMUSG00000029174	RIKEN cDNA C130026I21 gene	protein-coding
unique_peak1-1162-11-1-2.50869358425161-2.83420869758413	chr11	99097957	99098597	+	0	NA	intron (NM_172946, intron 3 of 5)	intron (NM_172946, intron 3 of 5)	-5946	NM_020618	57376	Mm.379086	NM_020618	ENSMUSG00000037935	Smarce1	2810417B20Rik|5830412H02Rik|9030408N19Rik|Baf27	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	protein-coding
common_peak1-9704-19-16-0.315224485411347-0.448200956659575	chr12	25182427	25183326	+	0	NA	promoter-TSS (NM_020614)	promoter-TSS (NM_020614)	-570	NM_020614	21340	Mm.39082	NM_020614	ENSMUSG00000059669	Taf1b	4930408G01Rik|A230108M10Rik|TAFI68|Tafi86	TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B	protein-coding
common_peak1-13690-12-21--0.810655633549659-0.713635438203849	chr2	30062035	30062753	+	0	NA	Intergenic	Intergenic	-1175	NM_172404	70266	Mm.216089	NM_172404	ENSMUSG00000039648	Ccbl1	2010009K05Rik|AI182306|Gtk|Kat1|KatI	cysteine conjugate-beta lyase 1	protein-coding
common_peak2-25947-8-15--0.994777582052429-0.771068449301683	chr19	47316215	47316712	+	0	NA	intron (NM_021360, intron 3 of 5)	intron (NM_021360, intron 3 of 5)	13130	NM_001163480	18011	Mm.313651	NM_021360	ENSMUSG00000006435	Neurl1a	2410129E16Rik|AI450910|AI481072|Neu1|Neur1|Neurl|Neurl1|Nlz|Rnf67	neuralized homolog 1A (Drosophila)	protein-coding
unique_peak2-33268-4-5--0.608423014574403-0.909929411522249	chr10	128696742	128697171	+	0	NA	Intergenic	Intergenic	-1063	NM_207559	404321	Mm.355212	NM_207559	ENSMUSG00000095483	Olfr776	MOR111-12	olfactory receptor 776	protein-coding
common_peak2-24964-14-7-0.899216160357645-0.947446088118041	chr18	5414493	5414974	+	0	NA	Intergenic	Intergenic	-80296	NM_178722	240186	Mm.118257	NM_178722	ENSMUSG00000050945	Zfp438	9430031G09|9430091M14Rik|B830013J05Rik	zinc finger protein 438	protein-coding
common_peak1-8994-20-22--0.03548717146582-0.301029995663994	chr11	59839181	59839888	+	0	NA	intron (NM_001290012, intron 2 of 6)	intron (NM_001290012, intron 2 of 6)	10973	NM_008819	18618	Mm.2731	NM_008819	ENSMUSG00000000301	Pemt	PEAMT|PEMT2|Pempt|Pempt2	phosphatidylethanolamine N-methyltransferase	protein-coding
common_peak1-11655-18-15-0.312919151228352-0.456667090758524	chr16	24135922	24136681	+	0	NA	Intergenic	Intergenic	-147603	NM_009744	12053	Mm.347398	NM_009744	ENSMUSG00000022508	Bcl6	Bcl5	B cell leukemia/lymphoma 6	protein-coding
unique_peak2-37779-1-6--2.43441193227435-1.56314192529759	chr5	117365019	117365404	+	0	NA	Intergenic	Intergenic	200791	NM_001122666	71954	Mm.34456	NM_178622	ENSMUSG00000066900	Suds3	2400003N08Rik|2410008L21Rik|AU067672|mSds3	suppressor of defective silencing 3 homolog (S. cerevisiae)	protein-coding
common_peak1-8160-61-49-0.738893139974616-2.22432009274866	chr1	193413785	193415921	+	0	NA	intron (NM_178632, intron 4 of 19)	intron (NM_178632, intron 4 of 19)	15240	NM_178632	77065	Mm.338175	NM_178632	ENSMUSG00000037461	Ints7	5930412E23Rik	integrator complex subunit 7	protein-coding
common_peak2-19588-18-23--0.272043349492805-0.34651636097721	chr1	16688256	16689296	+	0	NA	intron (NM_001159711, intron 2 of 4)	intron (NM_001159711, intron 2 of 4)	10239	NM_016923	17087	Mm.116844	NM_016923	ENSMUSG00000025779	Ly96	ESOP-1|MD-2|MD2	lymphocyte antigen 96	protein-coding
common_peak2-21914-38-38-0.286050440436282-0.554098881286537	chr12	13248668	13249516	+	0	NA	intron (NM_134040, intron 6 of 25)	intron (NM_134040, intron 6 of 25)	6888	NM_134040	104721	Mm.251255	NM_134040	ENSMUSG00000037149	Ddx1	AA409185|DBP-RB	DEAD (Asp-Glu-Ala-Asp) box polypeptide 1	protein-coding
unique_peak2-37795-3-6--1.22133801201688-1.08602067057793	chr5	121842560	121842926	+	0	NA	Intergenic	Intergenic	-5248	NM_172722	231713	Mm.33919	NM_172722		Naa25	4833422K13Rik|A630046C11|AI450868|C330023M02Rik|Mdm20	N(alpha)-acetyltransferase 25, NatB auxiliary subunit	protein-coding
unique_peak1-1872-11-5-0.923731083530457-1.477227296591	chr14	57570909	57571604	+	0	NA	intron (NM_029498, intron 20 of 23)	L1M4|LINE|L1	-62715	NM_001256060	432860	Mm.390718	NM_001256060	ENSMUSG00000096144	B020004C17Rik	-	RIKEN cDNA B020004C17 gene	protein-coding
unique_peak1-635-8-8--0.164702583494742-1.00793137938329	chr10	37338093	37338688	+	0	NA	Intergenic	Intergenic	-479658	NM_008538	17118	Mm.30059	NM_008538	ENSMUSG00000069662	Marcks	Macs|PKCSL	myristoylated alanine rich protein kinase C substrate	protein-coding
unique_peak2-37472-14-27--0.908138761699959-1.05601013496724	chr5	3305909	3306977	+	0	NA	Intergenic	L1M3b|LINE|L1	-37869	NM_009873	12571	Mm.31672	NM_009873	ENSMUSG00000040274	Cdk6	5830411I20|AI504062|Crk2	cyclin-dependent kinase 6	protein-coding
common_peak1-12602-8-8--0.164702583494742-1.00793137938329	chr18	25486950	25487477	+	0	NA	intron (NM_001033532, intron 6 of 10)	intron (NM_001033532, intron 6 of 10)	159692	NM_001033532	225289	Mm.391081	NM_001033532	ENSMUSG00000033632	AW554918	4921538P22|AI461742|Kiaa1328|mKIAA1328	expressed sequence AW554918	protein-coding
unique_peak1-5025-46-12-2.19755622510771-7.88649991600941	chr4	130176882	130178396	+	0	NA	Intergenic	Intergenic	-41635	NM_030722	80912	Mm.440206	NM_030722	ENSMUSG00000028580	Pum1	AA517475|Pumm|mKIAA0099	pumilio RNA-binding family member 1	protein-coding
common_peak1-15282-29-22-0.588728124558098-0.950553505527076	chr4	40722309	40723269	+	0	NA	Intergenic	Intergenic	-17871	NM_021535	74255	Mm.289929	NM_021535		Smu1	2600001O03Rik|2610203K23Rik|AB044414|AI845086|AW556129|Bwd	smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)	protein-coding
unique_peak1-384-9-3-1.18961340640422-1.57096726280955	chr1	153103620	153104185	+	0	NA	Intergenic	MT2B|LTR|ERVL	-87726	NM_001039512	117198	Mm.33764	NM_028582	ENSMUSG00000023150	Ivns1abp	1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850	influenza virus NS1A binding protein	protein-coding
common_peak2-28071-9-24--1.4542427833705-1.83731222263754	chr4	70535106	70535697	+	0	NA	Intergenic	L1Md_F3|LINE|L1	-339439	NM_172694	230316	Mm.251188	NM_172694		Megf9	4933405H16Rik|9630025C07|Egfl5|mKIAA0818	multiple EGF-like-domains 9	protein-coding
unique_peak2-37430-4-8--1.19338551529556-1.21878474469819	chr4	150799069	150799505	+	0	NA	intron (NM_001081557, intron 5 of 23)	intron (NM_001081557, intron 5 of 23)	-367225	NM_009498	22319	Mm.273930	NM_009498	ENSMUSG00000028955	Vamp3	D130027G05Rik|VAMP-3|ceb	vesicle-associated membrane protein 3	protein-coding
unique_peak1-2574-13-1-2.77847203063777-3.64038867156802	chr16	29526934	29527644	+	0	NA	intron (NM_172613, intron 1 of 29)	intron (NM_172613, intron 1 of 29)	14280	NM_172613	224079	Mm.54954	NM_172613	ENSMUSG00000038094	Atp13a4	4631413J11Rik|4832416L12|9330174J19Rik	ATPase type 13A4	protein-coding
common_peak2-22682-33-50--0.341087779445966-0.542803625802499	chr13	98262731	98263796	+	0	NA	intron (NR_110430, intron 2 of 2)	intron (NR_110430, intron 2 of 2)	10607	NR_110431	100039691	Mm.219358	NR_110430		Lincenc1	ENSMUSG00000078952|Gm11019|Gm2373|linc-Enc1	long intergenic non-coding RNA, embryonic stem cells expressed 1	ncRNA
unique_peak2-37683-3-6--1.22133801201688-1.08602067057793	chr5	97382781	97383239	+	0	NA	Intergenic	MER5A1|DNA|MER1_type	-43698	NM_080708	140780	Mm.281490	NM_080708	ENSMUSG00000034663	Bmp2k	4933417M22Rik|AA673486|AV128808|BIKE	BMP2 inducible kinase	protein-coding
unique_peak2-36064-8-11--0.579740082773585-1.14218153353838	chr19	53038876	53039469	+	0	NA	Intergenic	Intergenic	41501	NR_030678	100043450	Mm.145594	NR_030678		AA387883	-	expressed sequence AA387883	ncRNA
unique_peak2-34590-3-9--1.73591118484664-1.57096726280955	chr14	69814923	69815416	+	0	NA	Intergenic	Intergenic	6420	NM_010921	18095	Mm.3520	NM_010921	ENSMUSG00000022061	Nkx3-1	Bax|NKX3.1|NKX3A|Nkx-3.1|bagpipe	NK-3 transcription factor, locus 1 (Drosophila)	protein-coding
unique_peak2-32929-8-7-0.00522241794757061-1.00793137938329	chr10	26774217	26774634	+	0	NA	exon (NM_008481, exon 43 of 64)	exon (NM_008481, exon 43 of 64)	282107	NM_176837	73910	Mm.356496	NM_176837	ENSMUSG00000039031	Arhgap18	4833419J07Rik|AI314906|AI843501	Rho GTPase activating protein 18	protein-coding
common_peak2-26825-17-8-1.04837133676273-1.30305656033811	chr2	152726886	152727282	+	0	NA	Intergenic	B4A|SINE|B4	-10004	NM_001081044	228785	Mm.250604	NM_001081044	ENSMUSG00000027470	Mylk2	9830004H17Rik|BB138278	myosin, light polypeptide kinase 2, skeletal muscle	protein-coding
common_peak2-31708-21-39--0.752438829621127-1.08405458203116	chr9	75775947	75776727	+	0	NA	Intergenic	Intergenic	-86447	NM_173731	208982	Mm.82306	NM_173731	ENSMUSG00000007908	Hmgcll1	BC037381	3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1	protein-coding
common_peak1-9978-48-45-0.447365195177801-0.955521670249481	chr13	81657402	81658562	+	0	NA	intron (NM_054053, intron 33 of 89)	intron (NM_054053, intron 33 of 89)	114161	NM_054053	110789	Mm.288694	NM_054053	ENSMUSG00000069170	Gpr98	Frings|Mass1|Mgr1|VLGR1	G protein-coupled receptor 98	protein-coding
common_peak1-14866-10-12--0.344024373132323-0.340565874754526	chr3	95356578	95357099	+	0	NA	intron (NM_001267695, intron 7 of 7)	B1_Mus1|SINE|Alu	-6761	NM_026489	67981	Mm.179050	NM_026489	ENSMUSG00000028109	Hormad1	4921522K05Rik|Nohma	HORMA domain containing 1	protein-coding
unique_peak2-38669-3-8--1.58390809140159-1.39487600375387	chr7	98928842	98929247	+	0	NA	intron (NM_011807, intron 3 of 22)	intron (NM_011807, intron 3 of 22)	-281860	NM_001243046	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
common_peak1-14211-25-14-0.954959309736587-1.46151065785802	chr2	150768009	150769209	+	0	NA	intron (NM_207204, intron 19 of 23)	intron (NM_207204, intron 19 of 23)	33279	NM_001163476	69270	Mm.271603	NM_027014	ENSMUSG00000027454	Gins1	2810418N01Rik|Gins4|PSF1|mKIAA0186	GINS complex subunit 1 (Psf1 homolog)	protein-coding
common_peak2-20210-179-242-0.323228171477688-1.83311269573665	chr1	178405521	178407004	+	0	NA	Intergenic	B4A|SINE|B4	-200819	NM_176916	319455	Mm.338001	NM_176916	ENSMUSG00000055214	Pld5	B230365F16Rik	phospholipase D family, member 5	protein-coding
unique_peak2-39183-1-5--2.2120195109379-1.32905871926422	chr8	95198394	95198697	+	0	NA	5' UTR (NM_001301137, exon 1 of 6)	5' UTR (NM_001301137, exon 1 of 6)	357	NM_001301137	64379	Mm.137247	NM_022428		Irx6	-	Iroquois related homeobox 6 (Drosophila)	protein-coding
common_peak1-10956-36-43-0.0198894675304571-0.310901174692144	chr15	25932980	25934116	+	0	NA	Intergenic	MLT1A0|LTR|MaLR	19427	NM_144523	52521	Mm.29145	NM_144523	ENSMUSG00000052253	Zfp622	1110033B05Rik|D15Ertd806e|ZPR9|Znf622	zinc finger protein 622	protein-coding
common_peak1-18993-70-119--0.28692367923312-0.743020633192633	chr9	57764444	57765962	+	0	NA	intron (NM_027086, intron 3 of 10)	intron (NM_027086, intron 3 of 10)	6410	NM_001122873	69459	Mm.41735	NM_027086	ENSMUSG00000055720	Ubl7	2300004C15Rik	ubiquitin-like 7 (bone marrow stromal cell-derived)	protein-coding
common_peak2-29267-17-37--1.02963117523855-1.57996244908225	chr5	142401433	142402145	+	0	NA	intron (NM_177879, intron 5 of 44)	L1Md_A|LINE|L1	-475662	NM_199068	17425	Mm.24214	NM_010812	ENSMUSG00000056493	Foxk1	A630048H08Rik|AI463295|ENSMUSG00000075577|Gm10868|Mnf	forkhead box K1	protein-coding
common_peak1-9785-46-59--0.00889465235971709-0.302854783871693	chr12	57545090	57546891	+	0	NA	Intergenic	L2a|LINE|L2	84417	NR_045082	104798	Mm.310950	NR_045082		E030019B13Rik	AI413669	RIKEN cDNA E030019B13 gene	ncRNA
unique_peak2-35769-6-9--0.75652998450706-1.11707584880836	chr18	43468231	43468940	+	0	NA	intron (NM_178749, intron 8 of 12)	RLTR25A|LTR|ERVK	64341	NM_001136086	22240	Mm.8180	NM_009468	ENSMUSG00000024501	Dpysl3	CRMP-4|DRP-3|TUC4|ULIP-1|Ulip|Ulip1	dihydropyrimidinase-like 3	protein-coding
common_peak1-9686-43-14-1.87567258991518-5.9572528572868	chr12	16852973	16854807	+	0	NA	Intergenic	Intergenic	36119	NM_033270	50496	Mm.23296	NM_033270	ENSMUSG00000057469	E2f6	AI462434|E2F6b|EMA	E2F transcription factor 6	protein-coding
unique_peak2-39654-8-11--0.579740082773585-1.14218153353838	chr9	106475737	106476265	+	0	NA	Intergenic	RLTR13D3|LTR|ERVK	-2703	NM_026090	67320	Mm.335431	NM_026090	ENSMUSG00000041009	Iqcf4	1700042N06Rik|mtIQ1	IQ motif containing F4	protein-coding
unique_peak2-38483-6-5--0.0195643903408542-0.947717972411649	chr7	30729827	30730106	+	0	NA	intron (NM_178384, intron 1 of 4)	ORR1B1|LTR|MaLR	6946	NM_178384	72723	Mm.371648	NM_178384	ENSMUSG00000059975	Zfp74	2810054M15Rik|KRAB8|Zfp66|Znf569|mszf21|mszf77	zinc finger protein 74	protein-coding
common_peak1-17958-19-26--0.352200175501782-0.416752705545949	chr7	128739707	128740530	+	0	NA	Intergenic	Intergenic	-6768	NR_102286	75793	Mm.23397	NR_102286		4933432K03Rik	1700001C18Rik|4930433G11Rik|AI428127	RIKEN cDNA 4933432K03 gene	ncRNA
common_peak2-25322-9-7-0.18961340640422-1.05908390183068	chr18	75458300	75458651	+	0	NA	Intergenic	MLT1B|LTR|MaLR	-1492	NR_045393	100503117	Mm.250517	NR_045393		2010010A06Rik	5033420E22Rik	RIKEN cDNA 2010010A06 gene	ncRNA
common_peak1-11451-74-129--0.306481236049847-0.836487378008737	chr15	101253297	101255195	+	0	NA	intron (NM_033073, intron 7 of 8)	intron (NM_033073, intron 7 of 8)	11412	NM_033073	110310	Mm.486285	NM_033073		Krt7	D15Wsu77e|K7|Krt2-7	keratin 7	protein-coding
unique_peak1-2988-8-0-3.00522241794757-2.70926996097583	chr17	79538661	79539162	+	0	NA	Intergenic	Intergenic	87665	NM_027455	70536	Mm.293870	NM_027455	ENSMUSG00000024084	Qpct	5730422A13Rik	glutaminyl-peptide cyclotransferase (glutaminyl cyclase)	protein-coding
unique_peak2-38477-8-7-0.00522241794757061-1.00793137938329	chr7	30552496	30552936	+	0	NA	promoter-TSS (NM_023750)	promoter-TSS (NM_023750)	-855	NM_023750	74352	Mm.251083	NM_023750		Zfp84	2210410P13Rik|4633401C23Rik|AI415447|BB081605|C86188|KRAB18|Zfp69	zinc finger protein 84	protein-coding
common_peak2-20310-54-98--0.456270858449876-1.16790778515003	chr10	120978378	120979818	+	0	NA	Intergenic	B4A|SINE|B4	44752	NM_019786	56480	Mm.34580	NM_019786	ENSMUSG00000020115	Tbk1	1200008B05Rik|AI462036|AW048562	TANK-binding kinase 1	protein-coding
unique_peak2-37805-11-10-0.0492619656143161-0.31137425193576	chr5	123572589	123573029	+	0	NA	intron (NM_175092, intron 2 of 4)	(TTTG)n|Simple_repeat|Simple_repeat	9829	NM_175092	23912	Mm.253876	NM_175092	ENSMUSG00000029449	Rhof	AI845056|AV026554|Arhf|Ifld1|Rif	ras homolog gene family, member f	protein-coding
unique_peak2-39264-3-7--1.41398308995928-1.23214870625617	chr8	119933420	119933851	+	0	NA	intron (NM_001163262, intron 3 of 20)	intron (NM_001163262, intron 3 of 20)	-43288	NR_106045	102466801		NR_106045		Mir7077	mmu-mir-7077	microRNA mir-7077	ncRNA
unique_peak2-34423-2-6--1.72480917832092-1.26211192963361	chr14	19839921	19840261	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-113950	NM_144839	218793	Mm.23551	NM_144839	ENSMUSG00000058317	Ube2e2	BC016265	ubiquitin-conjugating enzyme E2E 2	protein-coding
common_peak1-15605-32-40--0.0784599853984238-0.303778768325576	chr4	132269958	132270733	+	0	NA	intron (NM_210071, intron 15 of 16)	intron (NM_210071, intron 15 of 16)	18116	NM_201368	381560	Mm.44558	NM_201368	ENSMUSG00000037752	Xkr8	4931440N07Rik|AI597014|Gm1031|XRG8|mXkr8	X Kell blood group precursor related family member 8 homolog	protein-coding
unique_peak1-4250-10-4-1.03448725012141-1.5150158574804	chr2	128391621	128392147	+	0	NA	Intergenic	RMER5|LTR|ERV1	121247	NM_008569	17222	Mm.277408	NM_008569	ENSMUSG00000014355	Anapc1	2610021O03Rik|AI047775|AI853536|AW547281|Apc1|Mcpr|tsg24	anaphase promoting complex subunit 1	protein-coding
common_peak2-25393-364-323-1.14540422660866-33.5372019422317	chr19	3767215	3769094	+	0	NA	5' UTR (NM_001167886, exon 2 of 11)	5' UTR (NM_001167886, exon 2 of 11)	733	NM_001167885	225888	Mm.278578	NM_144871	ENSMUSG00000045098	Suv420h1	AA117471|C630029K18Rik|KMT5B|Suv4-20h1	suppressor of variegation 4-20 homolog 1 (Drosophila)	protein-coding
unique_peak1-650-11-5-0.923731083530457-1.477227296591	chr10	54102104	54102688	+	0	NA	Intergenic	Intergenic	306668	NR_038016	100502920	Mm.403982	NR_038016	ENSMUSG00000097069	Gm16998	-	predicted gene, 16998	ncRNA
common_peak2-25099-17-29--0.688594257403481-0.756750750680359	chr18	36560483	36561321	+	0	NA	Intergenic	Intergenic	52624	NM_001081365	66060	Mm.272527	NM_001081365		Cystm1	0610010O12Rik	cysteine-rich transmembrane module containing 1	protein-coding
unique_peak1-2585-10-6-0.549060422951165-1.21398586181642	chr16	30821069	30821596	+	0	NA	Intergenic	Intergenic	221523	NM_177632	224093	Mm.28244	NM_177632	ENSMUSG00000046546	Fam43a	Tuf1	family with sequence similarity 43, member A	protein-coding
common_peak2-25867-16-5-1.53330114154691-1.80287260729378	chr19	43607470	43607853	+	0	NA	Intergenic	Intergenic	-8566	NM_010324	14718	Mm.19039	NM_010324	ENSMUSG00000025190	Got1	AI789014|Got-1|cAspAT|cCAT	glutamate oxaloacetate transaminase 1, soluble	protein-coding
common_peak1-13134-11-10-0.0492619656143161-0.31137425193576	chr19	9135042	9135838	+	0	NA	intron (NM_001286518, intron 6 of 6)	B1_Mm|SINE|Alu	27006	NM_011681	22287	Mm.2258	NM_011681	ENSMUSG00000024653	Scgb1a1	CC10|CC16|CCSP|PCB-BP|UG|UGB|Utg	secretoglobin, family 1A, member 1 (uteroglobin)	protein-coding
common_peak2-29389-23-37--0.526160008934505-0.720235944639228	chr6	48840164	48841322	+	0	NA	Intergenic	RMER15|LTR|ERVL	-4511	NM_029638	76507	Mm.213898	NM_029638	ENSMUSG00000029811	Aoc1	1600012D06Rik|Abp1|DAO	amine oxidase, copper-containing 1	protein-coding
unique_peak2-36854-5-5--0.289342836727009-0.909929411522249	chr3	89394771	89395297	+	0	NA	intron (NM_080466, intron 2 of 7)	intron (NM_080466, intron 2 of 7)	70948	NM_080466	140493	Mm.120250	NM_080466		Kcnn3	KCa2.3|SK3|SKCA3	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	protein-coding
common_peak2-20996-42-102--0.944171199316035-3.56075252610485	chr11	23255706	23257013	+	0	NA	intron (NM_001190401, intron 10 of 79)	intron (NM_001190401, intron 10 of 79)	49464	NM_001190401	17847	Mm.119155	NM_001190401	ENSMUSG00000056342	Usp34	A530081C03Rik|Murr2	ubiquitin specific peptidase 34	protein-coding
unique_peak1-5899-9-1-2.18961340640422-2.31132995230379	chr6	87294041	87294599	+	0	NA	Intergenic	Intergenic	6589	NM_025466	66283	Mm.46414	NM_025466	ENSMUSG00000030050	Gkn1	2200002K21Rik|AMP-18|BRICD1|Fov	gastrokine 1	protein-coding
common_peak2-21446-23-26--0.0331199976543877-0.301029995663988	chr11	86645924	86646880	+	0	NA	Intergenic	Intergenic	-25240	NM_026191	67487	Mm.260627	NM_026191	ENSMUSG00000018425	Dhx40	2410016C14Rik|ARG147|DDX40|PAD	DEAH (Asp-Glu-Ala-His) box polypeptide 40	protein-coding
unique_peak1-3553-27-7-1.99154595089524-4.07016573886257	chr19	24573269	24574644	+	0	NA	intron (NM_008846, intron 1 of 14)	L1MEf|LINE|L1	-21992	NM_026520	68034	Mm.440181	NM_026520		Fam122a	2410124L17Rik|2900009I07Rik|ENSMUSG00000051082|Gm9849	family with sequence similarity 122, member A	protein-coding
common_peak1-11308-16-30--0.835932668118813-1.0921097739129	chr15	84235112	84235816	+	0	NA	intron (NM_001163145, intron 4 of 4)	intron (NM_001163145, intron 4 of 4)	42063	NM_001163145	72301	Mm.275387	NM_001163145	ENSMUSG00000062760	1810041L15Rik	Kiaa1644	RIKEN cDNA 1810041L15 gene	protein-coding
unique_peak2-39766-3-13--2.22133801201688-2.36932189928148	chrX	7188299	7188904	+	0	NA	intron (NM_019582, intron 6 of 47)	intron (NM_019582, intron 6 of 47)	4372	NM_019582	54652	Mm.289647	NM_019582	ENSMUSG00000031142	Cacna1f	A930034B14|Cav1.4|Sfc17|nerg1|nob2	calcium channel, voltage-dependent, alpha 1F subunit	protein-coding
common_peak2-27652-14-8-0.729291158915332-0.771068449301682	chr3	108086298	108086691	+	0	NA	promoter-TSS (NM_001271599)	promoter-TSS (NM_001271599)	-488	NM_001271599	20661	Mm.157119	NM_019972	ENSMUSG00000068747	Sort1	2900053A11Rik|AI852375|Ntr3|Ntsr3	sortilin 1	protein-coding
unique_peak1-6933-59-6-3.51800907881497-16.7388492774769	chr8	107403116	107404643	+	0	NA	Intergenic	L1Md_T|LINE|L1	12555	NR_033726	667754	Mm.28191	NR_033726	ENSMUSG00000031884	Ces2d-ps	ENSMUSG00000031884|Gm9756	carboxylesterase 2D, pseudogene	pseudo
common_peak2-31501-32-66--0.786997171238112-1.82572255783529	chr8	107095775	107096723	+	0	NA	Intergenic	Intergenic	-19119	NM_001024606	382051	Mm.290750	NM_001024606	ENSMUSG00000048371	Pdp2	4833426J09Rik|Gm1705|mKIAA1348	pyruvate dehyrogenase phosphatase catalytic subunit 2	protein-coding
unique_peak2-37187-1-6--2.43441193227435-1.56314192529759	chr4	56945749	56946157	+	0	NA	intron (NM_175518, intron 3 of 17)	intron (NM_175518, intron 3 of 17)	14348	NM_175518	242474	Mm.296632	NM_175518		Tmem245	A630051L19Rik|AI957324|D730040F13Rik	transmembrane protein 245	protein-coding
unique_peak2-34027-2-10--2.37688587490062-2.09384600808989	chr12	108932936	108933483	+	0	NA	Intergenic	Intergenic	40489	NR_045973	74968	Mm.359821	NR_045973	ENSMUSG00000085641	4930465M20Rik	4930431H15Rik	RIKEN cDNA 4930465M20 gene	ncRNA
unique_peak1-5548-9-4-0.867685311516858-1.36011389749466	chr5	142931173	142931618	+	0	NA	exon (NM_199068, exon 8 of 9)	exon (NM_199068, exon 8 of 9)	-8490	NM_172725	231855	Mm.78250	NM_172725	ENSMUSG00000039623	Ap5z1	C330006K01Rik	adaptor-related protein complex 5, zeta 1 subunit	protein-coding
common_peak2-32351-10-18--0.891512168434816-0.804350088532826	chrX	94151840	94152594	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-115718	NM_001033361	245526	Mm.336164	NM_001033361	ENSMUSG00000031212	Pgr15l	-	G protein-coupled receptor 15-like	protein-coding
common_peak1-19121-19-16-0.315224485411347-0.448200956659575	chr9	77482648	77483455	+	0	NA	Intergenic	L1_Mus4|LINE|L1	-1488	NM_172925	244923	Mm.138238	NM_172925	ENSMUSG00000044938	Klhl31	9830147P19Rik|D930047P17Rik|Kbtbd1	kelch-like 31	protein-coding
common_peak1-11538-17-26--0.53659116395843-0.538442145997695	chr16	4756587	4757092	+	0	NA	intron (NM_010443, intron 1 of 5)	intron (NM_010443, intron 1 of 5)	15226	NM_010443	15369	Mm.272866	NM_010443	ENSMUSG00000004070	Hmox2	HO-2|HO2	heme oxygenase (decycling) 2	protein-coding
common_peak1-12700-33-27-0.523982640467925-0.852249209606516	chr18	44471715	44472749	+	0	NA	Intergenic	L1MA4|LINE|L1	-21496	NM_001033621	58916	Mm.143804	NM_001033621	ENSMUSG00000024471	Myot	5530402I04Rik|Ttid	myotilin	protein-coding
common_peak2-25189-28-21-0.593527501184165-0.884951936461256	chr18	57747054	57748055	+	0	NA	intron (NM_029290, intron 3 of 6)	intron (NM_029290, intron 3 of 6)	-35503	NR_015494	75084	Mm.243841	NR_015494	ENSMUSG00000086607	4930511M06Rik	-	RIKEN cDNA 4930511M06 gene	ncRNA
common_peak1-14214-40-39-0.337047587863736-0.649502410911277	chr2	151038336	151039947	+	0	NA	Intergenic	MER68|LTR|ERVL	-88634	NR_040747	74660	Mm.170672	NR_040747	ENSMUSG00000087609	4930442J19Rik	1700029E19Rik|Gm14152|OTTMUSG00000015807	RIKEN cDNA 4930442J19 gene	ncRNA
unique_peak2-33056-4-17--2.19338551529556-2.18192634393779	chr10	76344785	76345301	+	0	NA	intron (NM_021568, intron 2 of 15)	intron (NM_021568, intron 2 of 15)	79649	NM_021568	59093	Mm.272803	NM_021568	ENSMUSG00000001120	Pcbp3	AlphaCP-3	poly(rC) binding protein 3	protein-coding
unique_peak1-2692-9-0-3.18961340640422-3.01029995663981	chr16	77749355	77749936	+	0	NA	Intergenic	Intergenic	103127	NR_029540	723952		NR_029540	miRBase:MI0000152	Mir125b-2	Mirn125b-2|mir-125b-2	microRNA 125b-2	ncRNA
unique_peak2-37094-12-27--1.15857893696997-1.38791538138627	chr3	152667683	152668571	+	0	NA	Intergenic	Lx9|LINE|L1	-22956	NM_012028	26938	Mm.40915	NM_012028		St6galnac5	AI851940|Siat7e	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	protein-coding
common_peak2-31152-11-12--0.191746133889479-0.310474156842889	chr8	41374801	41375317	+	0	NA	Intergenic	Intergenic	-2752	NM_030610	80857	Mm.425526	NM_030610	ENSMUSG00000031603	Fgf20	-	fibroblast growth factor 20	protein-coding
common_peak1-8381-18-12-0.612479433087259-0.739965416525508	chr10	62221140	62222051	+	0	NA	intron (NM_026201, intron 16 of 24)	intron (NM_026201, intron 16 of 24)	-32748	NM_001033260	216021	Mm.39821	NM_001033260	ENSMUSG00000036923	Stox1	4732470K04Rik|Gm63	storkhead box 1	protein-coding
common_peak1-18803-32-42--0.147172735482438-0.325162986021101	chr9	72531908	72532961	+	0	NA	intron (NM_010890, intron 5 of 28)	intron (NM_010890, intron 5 of 28)	22280	NM_010890	17999	Mm.279923	NM_010890	ENSMUSG00000032216	Nedd4	AA959633|AL023035|AU019897|E430025J12Rik|Nedd4-1|Nedd4a|mKIAA0093	neural precursor cell expressed, developmentally down-regulated 4	protein-coding
common_peak2-26512-26-30--0.0262972182284127-0.301029995663988	chr2	90678787	90679815	+	0	NA	Intergenic	ID_B1|SINE|B4	-8011	NM_019758	56428	Mm.28023	NM_019758	ENSMUSG00000027282	Mtch2	2310034D24Rik|4930539J07Rik|HSPC032	mitochondrial carrier homolog 2 (C. elegans)	protein-coding
unique_peak2-32442-2-5--1.50241675698448-1.08602067057793	chr1	86015711	86016036	+	0	NA	Intergenic	Intergenic	-748732	NM_001037909	620078	Mm.386456	NM_175219	ENSMUSG00000052477	C130026I21Rik	4930565N07Rik|OTTMUSG00000029174	RIKEN cDNA C130026I21 gene	protein-coding
common_peak1-16422-13-18--0.469455482805817-0.409888142029227	chr5	129942099	129942669	+	0	NA	Intergenic	Intergenic	-64722	NM_172276	231769	Mm.288714	NM_172276	ENSMUSG00000029439	Sfswap	1190005N23Rik|6330437E22Rik|AI197402|AW212079|SWAP|Sfrs8|Srsf8	splicing factor, suppressor of white-apricot homolog (Drosophila)	protein-coding
common_peak2-24191-26-29-0.0210084965499435-0.304710633611964	chr16	57121636	57122359	+	0	NA	exon (NM_138599, exon 1 of 12)	exon (NM_138599, exon 1 of 12)	170	NM_138599	28185	Mm.213292	NM_138599	ENSMUSG00000022752	Tomm70a	2610044B22Rik|D16Ium22|D16Ium22e|D16Wsu109e|Tom70|mKIAA0719	translocase of outer mitochondrial membrane 70 homolog A (yeast)	protein-coding
common_peak1-18662-26-21-0.468467473521165-0.647723624534446	chr8	117121182	117122038	+	0	NA	intron (NM_019573, intron 5 of 8)	intron (NM_019573, intron 5 of 8)	158058	NM_019573	80707	Mm.440420	NM_019573	ENSMUSG00000004637	Wwox	5330426P09Rik|9030416C10Rik|WOX1	WW domain-containing oxidoreductase	protein-coding
common_peak1-16239-57-73-0.0565796744499787-0.324195113983386	chr5	103753575	103754636	+	0	NA	Intergenic	Intergenic	-26057	NR_040699	74624	Mm.389662	NR_040699		4930429D17Rik	-	RIKEN cDNA 4930429D17 gene	ncRNA
common_peak2-27293-23-29--0.185123091099438-0.336580821310529	chr3	58882578	58883224	+	0	NA	intron (NM_177855, intron 10 of 43)	intron (NM_177855, intron 10 of 43)	22842	NM_173398	229323	Mm.123648	NM_173398	ENSMUSG00000050075	Gpr171	A630006E05|F730001G15Rik|H963	G protein-coupled receptor 171	protein-coding
common_peak2-31432-30-45--0.35388654656514-0.51862626278861	chr8	95331080	95332320	+	0	NA	Intergenic	Intergenic	-19527	NM_008610	17390	Mm.29564	NM_008610	ENSMUSG00000031740	Mmp2	Clg4a|GelA|MMP-2	matrix metallopeptidase 2	protein-coding
common_peak1-14383-18-6-1.50556422917075-2.02801025126771	chr2	168525000	168525806	+	0	NA	intron (NM_001289446, intron 4 of 27)	PB1D9|SINE|Alu	34436	NM_001289445	11981	Mm.330819	NM_015731	ENSMUSG00000027546	Atp9a	IIa	ATPase, class II, type 9A	protein-coding
unique_peak1-5062-25-10-1.40241828670781-2.39922209159552	chr4	137472947	137474231	+	0	NA	intron (NM_199307, intron 3 of 19)	intron (NM_199307, intron 3 of 19)	55437	NM_199307	230857	Mm.401062	NM_199307	ENSMUSG00000057530	Ece1	AW322500|ECE-1|ECE-1a|ECE-1b|ECE-1d	endothelin converting enzyme 1	protein-coding
common_peak2-31726-17-26--0.53659116395843-0.538442145997695	chr9	8017584	8018016	+	0	NA	Intergenic	Intergenic	-13204	NM_009534	22601	Mm.221992	NM_009534	ENSMUSG00000053110	Yap1	AI325207|Yap|Yap65|Yki|Yorkie	yes-associated protein 1	protein-coding
unique_peak2-38758-8-10--0.454209200689727-1.078512453669	chr7	120865163	120865661	+	0	NA	Intergenic	MIRb|SINE|MIR	-44100	NM_145584	233744	Mm.334160	NM_145584	ENSMUSG00000038156	Spon1	AI666765|AW455831|BC020531|D330035F22Rik|FSP	spondin 1, (f-spondin) extracellular matrix protein	protein-coding
common_peak2-26026-99-93-0.664768891605013-3.14063858802787	chr19	60225962	60226973	+	0	NA	intron (NR_026942, intron 1 of 4)	intron (NR_026942, intron 1 of 4)	5889	NR_026942	107376	Mm.245813	NR_026942	ENSMUSG00000053117	E330013P04Rik	9930018I18Rik|AW492152	RIKEN cDNA E330013P04 gene	ncRNA
common_peak1-7577-22-29--0.259606490521114-0.36542888694933	chr1	51477420	51478333	+	0	NA	Intergenic	RLTR13B1|LTR|ERVK	57367	NM_028696	109019	Mm.196290	NM_028696	ENSMUSG00000026107	Nabp1	4930434H03Rik|4930442A21Rik|4930488J04Rik|4933440J18Rik|5830411E10Rik|AI852561|Nbp1|Obfc2a|Ssb2	nucleic acid binding protein 1	protein-coding
common_peak1-16765-9-9--0.132314688483142-1.03275496310833	chr6	34863648	34864149	+	0	NA	Intergenic	L2a|LINE|L2	-3067	NM_001013366	101240	Mm.152120	NM_001013366	ENSMUSG00000058486	Wdr91	9530020G05Rik|AI987683|AU018665	WD repeat domain 91	protein-coding
unique_peak2-36930-2-9--2.23938235115068-1.87199725847353	chr3	102338138	102338580	+	0	NA	Intergenic	L1MA4|LINE|L1	64517	NM_013609	18049	Mm.1259	NM_013609	ENSMUSG00000027859	Ngf	Ngfb	nerve growth factor	protein-coding
common_peak1-10008-18-6-1.50556422917075-2.02801025126771	chr13	5841171	5842163	+	0	NA	Intergenic	GA-rich|Low_complexity|Low_complexity	15671	NR_045891	71867	Mm.179181	NR_045891		1700016G22Rik	-	RIKEN cDNA 1700016G22 gene	ncRNA
unique_peak1-3720-7-0-2.79909083029819-2.40823996531185	chr19	46197718	46198228	+	0	NA	Intergenic	Intergenic	-8416	NM_007703	12686	Mm.21806	NM_007703	ENSMUSG00000038754	Elovl3	CIN-2|Cig30	elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 3	protein-coding
unique_peak2-38395-1-5--2.2120195109379-1.32905871926422	chr7	19381905	19382201	+	0	NA	intron (NM_011964, intron 2 of 4)	intron (NM_011964, intron 2 of 4)	1806	NM_011964	26439	Mm.36878	NM_011964	ENSMUSG00000004542	Psg19	CGM7|Cea-4|Cea4	pregnancy specific glycoprotein 19	protein-coding
common_peak2-24885-33-31-0.331337562525529-0.549429090733244	chr17	83861489	83862146	+	0	NA	intron (NM_001286567, intron 19 of 23)	intron (NM_001286567, intron 19 of 23)	51856	NM_009187	20463	Mm.30072	NM_009187	ENSMUSG00000024248	Cox7a2l	COX7AR|COX7RP|EB1|SIG-81|SIG81|Silg81	cytochrome c oxidase subunit VIIa polypeptide 2-like	protein-coding
common_peak2-19528-21-43--0.889942353371062-1.48724131519613	chr1	66862663	66863401	+	0	NA	intron (NM_001122738, intron 1 of 14)	CpG	1137	NM_177645	68691	Mm.240912	NM_177645	ENSMUSG00000026004	Kansl1l	1110028C15Rik|1190030G24|AI427598|C430010P07Rik|mKIAA4189	KAT8 regulatory NSL complex subunit 1-like	protein-coding
common_peak1-15817-59-37-1.07743648742899-3.81445641388314	chr5	89276126	89278122	+	0	NA	Intergenic	Intergenic	-39161	NM_001197147	54403	Mm.41044	NM_018760	ENSMUSG00000060961	Slc4a4	AI835705|NBC|NBC1	solute carrier family 4 (anion exchanger), member 4	protein-coding
common_peak2-21464-16-23--0.466698858453094-0.497202060940027	chr11	87404528	87405085	+	0	NA	promoter-TSS (NM_133215)	promoter-TSS (NM_133215)	-913	NM_133215	170749	Mm.399376	NM_133215	ENSMUSG00000018401	Mtmr4	AA596759|ESTM44|FYVE-DSP2|ZFYVE11|mKIAA0647	myotubularin related protein 4	protein-coding
common_peak1-10433-12-9-0.326847890200276-0.459837087125828	chr13	101767037	101767597	+	0	NA	Intergenic	Intergenic	-163935	NM_022885	69048	Mm.402215	NM_022885	ENSMUSG00000021629	Slc30a5	1810010K08Rik|AF233321|ZNT5|ZTL1|ZnT-5|Zntl1	solute carrier family 30 (zinc transporter), member 5	protein-coding
common_peak2-25670-16-13-0.310908720210457-0.417187467413082	chr19	10740644	10741223	+	0	NA	Intergenic	Intergenic	11628	NM_021453	58803	Mm.34037	NM_021453	ENSMUSG00000024738	Pga5	1110035E17Rik|Pepf	pepsinogen 5, group I	protein-coding
common_peak2-24236-35-43--0.0280613601747932-0.301029995663985	chr16	90197384	90198690	+	0	NA	Intergenic	Intergenic	-22950	NM_011434	20655	Mm.276325	NM_011434	ENSMUSG00000022982	Sod1	B430204E11Rik|Cu/Zn-SOD|CuZnSOD|Ipo-1|Ipo1|SODC|Sod-1	superoxide dismutase 1, soluble	protein-coding
common_peak2-31237-11-22--1.0148683718054-1.11267835143409	chr8	70234150	70234499	+	0	NA	intron (NM_177698, intron 14 of 14)	B2_Mm2|SINE|B2	107870	NM_027626	234353	Mm.32525	NM_027626	ENSMUSG00000030465	Psd3	4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D	pleckstrin and Sec7 domain containing 3	protein-coding
common_peak1-16984-9-9--0.132314688483142-1.03275496310833	chr6	87277653	87278121	+	0	NA	intron (NM_054041, intron 1 of 17)	intron (NM_054041, intron 1 of 17)	7882	NM_054041	69538	Mm.232525	NM_054041	ENSMUSG00000033420	Antxr1	2310008J16Rik|2810405N18Rik|Antrx1|Tem8	anthrax toxin receptor 1	protein-coding
unique_peak1-6954-11-1-2.50869358425161-2.83420869758413	chr8	111734528	111735162	+	0	NA	Intergenic	L1ME3A|LINE|L1	129963	NR_002928	384864	Mm.390083	NR_002928		Gm1943	-	WD repeat domain 70 pseudogene	pseudo
common_peak1-9322-17-10-0.75886471956774-0.917676348953458	chr11	94676826	94677667	+	0	NA	intron (NM_001163172, intron 1 of 4)	(A)n|Simple_repeat|Simple_repeat	16070	NM_001163172	544806	Mm.379774	NM_001034896	ENSMUSG00000075610	Tmem92	AU016430|Tmem92-ps	transmembrane protein 92	protein-coding
unique_peak2-36264-7-16--1.28837201095215-1.08658567012551	chr2	59612845	59613477	+	0	NA	intron (NM_001290659, intron 6 of 25)	intron (NM_001290659, intron 6 of 25)	107502	NM_001159636	72137	Mm.288734	NM_028118	ENSMUSG00000026988	Wdsub1	1700048E19Rik|2610014F08Rik	WD repeat, SAM and U-box domain containing 1	protein-coding
common_peak2-28369-27-29-0.0846553552867171-0.333081040816753	chr4	137593645	137594422	+	0	NA	intron (NM_001256198, intron 2 of 32)	intron (NM_001256198, intron 2 of 32)	44662	NM_172703	230861	Mm.268903	NM_172703	ENSMUSG00000028760	Eif4g3	1500002J22Rik|4833436O05|4930523M17Rik|G1-419-52|eIF4GII|repro8	eukaryotic translation initiation factor 4 gamma, 3	protein-coding
common_peak2-30880-72-90-0.160789172673621-0.463996621321663	chr7	141228106	141229364	+	0	NA	intron (NM_007400, intron 3 of 22)	intron (NM_007400, intron 3 of 22)	188045	NM_007400	11489	Mm.439714	NM_007400	ENSMUSG00000054555	Adam12	Mltna|mKIAA4001	a disintegrin and metallopeptidase domain 12 (meltrin alpha)	protein-coding
common_peak2-24418-23-18-0.473839991065495-0.618644178587689	chr17	17004931	17005582	+	0	NA	Intergenic	Intergenic	-195811	NM_001005358	449000	Mm.483718	NM_001005358	ENSMUSG00000096696	Zfp960	-	zinc finger protein 960	protein-coding
common_peak2-25363-20-21-0.0286431659538957-0.306080386793804	chr18	82475220	82476173	+	0	NA	Intergenic	Intergenic	100473	NM_008082	14427	Mm.6219	NM_008082	ENSMUSG00000024553	Galr1	Galnr1	galanin receptor 1	protein-coding
unique_peak2-37873-2-7--1.91745425626332-1.45399745587252	chr5	137787037	137787390	+	0	NA	Intergenic	Intergenic	-4124	NM_001159571	13846	Mm.34533	NM_010144	ENSMUSG00000029710	Ephb4	AI042935|Htk|MDK2|Myk1|Tyro11	Eph receptor B4	protein-coding
unique_peak1-2496-90-22-2.53074306988514-19.4648333338968	chr16	11143802	11144387	+	0	NA	intron (NR_027502, intron 19 of 22)	LSU-rRNA_Hsa|rRNA|rRNA	-9469	NM_029582	106200	Mm.291015	NM_029582	ENSMUSG00000022498	Txndc11	2810408E11Rik|AI427833|EFP1|Txdc11	thioredoxin domain containing 11	protein-coding
common_peak1-13941-10-11--0.228547155712387-0.31137425193576	chr2	90846590	90847128	+	0	NA	intron (NM_017368, intron 9 of 14)	intron (NM_017368, intron 9 of 14)	-28925	NM_009023	19400	Mm.1272	NM_009023	ENSMUSG00000002104	Rapsn	43kDa|Nraps|Raps|rapsyn	receptor-associated protein of the synapse	protein-coding
common_peak2-31411-53-84--0.268417923721773-0.53806889543825	chr8	94011606	94013229	+	0	NA	intron (NM_011936, intron 7 of 8)	intron (NM_011936, intron 7 of 8)	174993	NM_011936	26383	Mm.4375	NM_011936	ENSMUSG00000055932	Fto	AW743446|mKIAA1752	fat mass and obesity associated	protein-coding
unique_peak1-569-17-4-1.89636824331768-2.60953805094651	chr10	70286990	70287807	+	0	NA	Intergenic	Intergenic	-168687	NR_045292	319646	Mm.483039	NR_045291	ENSMUSG00000037747	D630013N20Rik	-	RIKEN cDNA D630013N20 gene	ncRNA
common_peak1-12993-22-13-0.8399291830298-1.1381569562463	chr19	4243809	4244834	+	0	NA	Intergenic	RMER4B|LTR|ERVK	12422	NM_027196	69745	Mm.32518	NM_027196	ENSMUSG00000024854	Pold4	2410012M21Rik|AI463381|AW060307|Polds|p12	polymerase (DNA-directed), delta 4	protein-coding
common_peak2-31836-8-12--0.695217300193522-0.475924844171029	chr9	44965095	44965596	+	0	NA	Intergenic	MLT1A1|LTR|MaLR	18220	NM_001013390	399548	Mm.335112	NM_001013390	ENSMUSG00000046480	Scn4b	Gm1471	sodium channel, type IV, beta	protein-coding
unique_peak2-37441-5-5--0.289342836727009-0.909929411522249	chr4	155129757	155130152	+	0	NA	intron (NM_179203, intron 3 of 15)	intron (NM_179203, intron 3 of 15)	5253	NM_179203	108888	Mm.241152	NM_179203	ENSMUSG00000029036	Atad3a	2400004H09Rik|Atad3|Tob3|mKIAA1273	ATPase family, AAA domain containing 3A	protein-coding
common_peak1-12566-18-23--0.272043349492805-0.34651636097721	chr18	10324783	10325695	+	0	NA	promoter-TSS (NM_001083628)	promoter-TSS (NM_001083628)	62	NM_001083628	381157	Mm.261535	NM_001083628	ENSMUSG00000042942	Greb1l	mKIAA4095	growth regulation by estrogen in breast cancer-like	protein-coding
common_peak2-23686-27-26-0.236658448731768-0.436052471002789	chr15	86058738	86059614	+	0	NA	intron (NM_145476, intron 1 of 12)	intron (NM_145476, intron 1 of 12)	14287	NM_145476	223754	Mm.28904	NM_145476	ENSMUSG00000051864	Tbc1d22a	BC023106|D15Ertd781e	TBC1 domain family, member 22a	protein-coding
common_peak1-11704-81-117--0.0105934463532762-0.301029995663933	chr16	31662710	31664888	+	0	NA	promoter-TSS (NM_007862)	promoter-TSS (NM_007862)	-222	NM_001252433	13383	Mm.382	NM_007862	ENSMUSG00000022770	Dlg1	B130052P05Rik|Dlgh1|E-dlg/SAP97|SAP-97|SAP97|mKIAA4187	discs, large homolog 1 (Drosophila)	protein-coding
common_peak2-26877-14-12-0.198776442216552-0.373562084705529	chr2	156420751	156421376	+	0	NA	Intergenic	MER46C|DNA|MER2_type	18095	NR_040372	100504350	Mm.94426	NR_040372	ENSMUSG00000086118	Gm14169	OTTMUSG00000015869	predicted gene 14169	ncRNA
common_peak1-11878-30-49--0.474180780282851-0.734468890407008	chr16	94568561	94569416	+	0	NA	Intergenic	Intergenic	18959	NM_133229	170765	Mm.42604	NM_133229	ENSMUSG00000022941	Ripply3	Dscr6	ripply3 homolog (zebrafish)	protein-coding
common_peak2-24600-44-52-0.0939723800053365-0.350851889851556	chr17	32363794	32364684	+	0	NA	intron (NM_001286630, intron 3 of 19)	intron (NM_001286630, intron 3 of 19)	-14626	NR_102329	100043434		NR_102329		Gm4432	-	predicted gene 4432	pseudo
common_peak1-16558-13-19--0.543456064249594-0.466170754204149	chr5	145167259	145167995	+	0	NA	Intergenic	Intergenic	48233	NR_102373	100579137		NR_102372		Dmr	-	Dmrt1 related	ncRNA
unique_peak1-3501-11-0-3.50869358425161-3.61235994796777	chr19	15265056	15265519	+	0	NA	Intergenic	Intergenic	-592814	NM_011600	21888	Mm.103638	NM_011600	ENSMUSG00000024642	Tle4	5730411M05Rik|AA792082|Bce-1|Bce1|ESTM13|ESTM14|Grg4|X83332|X83333	transducin-like enhancer of split 4, homolog of Drosophila E(spl)	protein-coding
common_peak1-13419-74-126--0.272798109793558-0.716156726114814	chr19	53528300	53530619	+	0	NA	intron (NR_028427, intron 2 of 9)	intron (NR_028427, intron 2 of 9)	9827	NR_028427	381232	Mm.248624	NR_028427	ENSMUSG00000097636	5830416P10Rik	4833407H14Rik|5430437C04Rik|ENSMUSG00000074788|Gm10758	RIKEN cDNA 5830416P10 gene	ncRNA
unique_peak2-34814-9-8-0.0196884049619079-1.03275496310833	chr15	74701660	74702163	+	0	NA	Intergenic	L1Md_F2|LINE|L1	10223	NM_025929	67038	Mm.154566	NM_025929	ENSMUSG00000063522	2010109I03Rik	-	RIKEN cDNA 2010109I03 gene	protein-coding
common_peak1-8496-21-31--0.430510734733764-0.49501414494053	chr10	81176609	81177246	+	0	NA	intron (NM_001243067, intron 1 of 3)	ORR1A2-int|LTR|MaLR	9357	NM_001243067	73610	Mm.490466	NM_001243067		Zfp433	1700123A16Rik	RIKEN cDNA 1700123A16 gene	protein-coding
common_peak2-21874-78-162--0.541907060070542-2.29344548977502	chr12	72760368	72762077	+	0	NA	Intergenic	B1F2|SINE|Alu	119628	NR_045941	73815	Mm.416916	NR_045941		4930404H11Rik	-	RIKEN cDNA 4930404H11 gene	ncRNA
unique_peak1-5536-9-1-2.18961340640422-2.31132995230379	chr5	140331102	140331584	+	0	NA	Intergenic	Intergenic	-28546	NM_025604	66506	Mm.29070	NM_025604	ENSMUSG00000029551	Psmg3	1810042K04Rik|4930403H09Rik|AI303239	proteasome (prosome, macropain) assembly chaperone 3	protein-coding
common_peak1-16074-13-16--0.30899081061257-0.330004445983672	chr5	53588705	53589338	+	0	NA	intron (NM_172710, intron 2 of 23)	intron (NM_172710, intron 2 of 23)	15670	NM_172710	231238	Mm.235020	NM_172710	ENSMUSG00000029189	Sel1l3	2310045A20Rik|AI429585|mKIAA0746	sel-1 suppressor of lin-12-like 3 (C. elegans)	protein-coding
common_peak1-18766-76-63-0.761944385863282-3.00523927287399	chr8	126826593	126828535	+	0	NA	intron (NM_139272, intron 2 of 15)	MER112|DNA|MER1_type	72270	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
common_peak1-19110-70-119--0.28692367923312-0.743020633192633	chr9	75408951	75411075	+	0	NA	Intergenic	B1F2|SINE|Alu	-2549	NM_016963	50875	Mm.38445	NM_016963	ENSMUSG00000058587	Tmod3	U-Tmod|UTMOD	tropomodulin 3	protein-coding
common_peak2-30885-25-27-0.0544949832875021-0.316543811862083	chr7	141447091	141448222	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-30876	NM_007400	11489	Mm.439714	NM_007400	ENSMUSG00000054555	Adam12	Mltna|mKIAA4001	a disintegrin and metallopeptidase domain 12 (meltrin alpha)	protein-coding
common_peak2-20224-12-13--0.158578936969966-0.301029995663979	chr1	180850236	180850952	+	0	NA	intron (NM_001161665, intron 12 of 14)	intron (NM_001161665, intron 12 of 14)	391338	NM_001161665	269152	Mm.129727	NM_177724	ENSMUSG00000026494	Kif26b	4832420M10|BC056349|D230039L06Rik	kinesin family member 26B	protein-coding
unique_peak2-35623-6-5--0.0195643903408542-0.947717972411649	chr17	87174849	87175270	+	0	NA	intron (NM_010137, intron 1 of 15)	intron (NM_010137, intron 1 of 15)	21855	NM_010137	13819	Mm.1415	NM_010137	ENSMUSG00000024140	Epas1	HIF-2alpha|HIF2A|HLF|HRF|MOP2|bHLHe73	endothelial PAS domain protein 1	protein-coding
unique_peak2-34396-2-6--1.72480917832092-1.26211192963361	chr14	89898628	89899063	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-397186	NR_002862	328451	Mm.320571	NR_002862		Gm5088	EG328451|Pabpc4l	poly(A)-binding protein, cytoplasmic pseudogene	pseudo
common_peak1-11924-14-12-0.198776442216552-0.373562084705529	chr17	57032158	57032870	+	0	NA	3' UTR (NM_022328, exon 12 of 12)	3' UTR (NM_022328, exon 12 of 12)	17458	NM_030141	78625	Mm.160106	NM_030141	ENSMUSG00000024209	1700061G19Rik	1700026H02|AI507598	RIKEN cDNA 1700061G19 gene	protein-coding
common_peak2-21109-7-8--0.370834171144123-1.00793137938329	chr11	52332822	52333242	+	0	NA	Intergenic	L1MC4a|LINE|L1	123102	NM_153117	213673	Mm.291979	NM_153117	ENSMUSG00000036275	9530068E07Rik	C85061|Kct2	RIKEN cDNA 9530068E07 gene	protein-coding
unique_peak2-38731-6-9--0.75652998450706-1.11707584880836	chr7	112376100	112376471	+	0	NA	Intergenic	Intergenic	-23430	NM_147069	259072	Mm.377823	NM_147069	ENSMUSG00000048425	Olfr686	MOR35-1	olfactory receptor 686	protein-coding
unique_peak1-545-10-7-0.356415345008769-1.12966497611638	chr1	191494049	191494543	+	0	NA	intron (NM_001081363, intron 9 of 17)	intron (NM_001081363, intron 9 of 17)	17669	NM_001081363	108000	Mm.129746	NM_001081363	ENSMUSG00000026605	Cenpf	6530404A22Rik|AI325968|CENF|Lek1|PRO1779|mitosin	centromere protein F	protein-coding
unique_peak1-331-17-7-1.21829633820504-1.55050753388977	chr1	133224856	133225713	+	0	NA	intron (NM_001081011, intron 13 of 22)	B3A|SINE|B2	-49144	NM_019777	56489	Mm.386783	NM_019777	ENSMUSG00000042349	Ikbke	AW558201|IKK-i|IKKepsilon|Ikki	inhibitor of kappaB kinase epsilon	protein-coding
common_peak1-14302-12-9-0.326847890200276-0.459837087125828	chr2	158794594	158795119	+	0	NA	Intergenic	Intergenic	174313	NM_001291144	71715	Mm.315652	NM_145742	ENSMUSG00000027655	Dhx35	1200009D07Rik|Ddx35	DEAH (Asp-Glu-Ala-His) box polypeptide 35	protein-coding
common_peak1-7845-35-42-0.00510550376040619-0.30358472802154	chr1	131910300	131911419	+	0	NA	intron (NM_172485, intron 15 of 27)	intron (NM_172485, intron 15 of 27)	408717	NM_007827	13137	Mm.436759	NM_007827	ENSMUSG00000026401	Daf2	AI323748|Cd55b|Daf|Daf-TM|TM-DAF	decay accelerating factor 2	protein-coding
common_peak2-23581-22-22-0.123722149030391-0.342639663781856	chr15	79934874	79935957	+	0	NA	intron (NM_207708, intron 1 of 3)	intron (NM_207708, intron 1 of 3)	13651	NM_207708	20972	Mm.230301	NM_009303	ENSMUSG00000022415	Syngr1	R75468|Syngr1b|p29	synaptogyrin 1	protein-coding
common_peak1-10997-39-33-0.528298405668814-0.983321682013132	chr15	36810275	36812104	+	0	NA	Intergenic	Intergenic	-84505	NM_001253806	22631	Mm.3360	NM_011740	ENSMUSG00000022285	Ywhaz	1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	protein-coding
common_peak2-23545-43-119--1.12432741008482-5.5347163679189	chr15	78842299	78844002	+	0	NA	Intergenic	Intergenic	-1679	NR_045746	100038602	Mm.417074	NR_045746		Gm10865	ENSMUSG00000075558	predicted gene 10865	ncRNA
unique_peak2-39498-0-8--4.01005593191652-2.05605744720049	chr9	60929875	60930499	+	0	NA	Intergenic	Intergenic	23006	NR_105026	66785	Mm.158134	NR_105026		4933433G08Rik	-	RIKEN cDNA 4933433G08 gene	ncRNA
unique_peak2-33544-5-7--0.704380336005853-1.01466476204226	chr11	78398169	78398595	+	0	NA	intron (NM_008702, intron 6 of 10)	B3|SINE|B2	-34145	NM_133706	69071	Mm.29431	NM_133706	ENSMUSG00000037278	Tmem97	1810014L12Rik|AI115531|AL022956|D11Bhm182e	transmembrane protein 97	protein-coding
unique_peak2-34304-5-13--1.51173525806346-1.78669045979184	chr13	85289405	85290028	+	0	NA	Intergenic	RLTR13B4|LTR|ERVK	-39366	NM_023243	66671	Mm.18474	NM_023243	ENSMUSG00000021548	Ccnh	6330408H09Rik|AI661354|AV102684|AW538719	cyclin H	protein-coding
common_peak2-28406-4-9--1.34538860874061-1.36011389749466	chr4	141281438	141282028	+	0	NA	Intergenic	Intergenic	-2399	NM_001017966	68817	Mm.393721	NM_001017966		Ddi2	1110056G13Rik|1700027M01Rik|9130022E05Rik|AI604911|AU040698	DNA-damage inducible protein 2	protein-coding
unique_peak2-34256-2-5--1.50241675698448-1.08602067057793	chr13	63066225	63066609	+	0	NA	intron (NM_001289926, intron 1 of 15)	CpG	164	NM_001289924	72061	Mm.188105	NM_028079	ENSMUSG00000021458	2010111I01Rik	2300006M17Rik|AP-O|Aopep	RIKEN cDNA 2010111I01 gene	protein-coding
common_peak1-8986-10-8-0.186490343566457-1.078512453669	chr11	59601145	59601625	+	0	NA	promoter-TSS (NM_183139)	promoter-TSS (NM_183139)	-226	NM_001290283	194908	Mm.344651	NM_183139		Pld6	4933433K01Rik|Gm10|Zuc|mZuc|mitoPLD	phospholipase D family, member 6	protein-coding
common_peak1-16629-9-6-0.382258484346616-1.11707584880836	chr6	32587663	32588080	+	0	NA	Intergenic	Intergenic	-49679	NM_175750	243743	Mm.444029	NM_175750	ENSMUSG00000029765	Plxna4	9330117B14|Plxa4|mKIAA1550	plexin A4	protein-coding
common_peak2-19587-8-10--0.454209200689727-1.078512453669	chr1	16687789	16688168	+	0	NA	intron (NM_001159711, intron 2 of 4)	B1_Mur1|SINE|Alu	9441	NM_016923	17087	Mm.116844	NM_016923	ENSMUSG00000025779	Ly96	ESOP-1|MD-2|MD2	lymphocyte antigen 96	protein-coding
unique_peak2-33351-16-27--0.689091279789542-0.798885335210229	chr11	30197443	30198798	+	0	NA	Intergenic	L1_Mus4|LINE|L1	-78348	NM_175836	20742	Mm.123110	NM_009260	ENSMUSG00000020315	Sptbn1	9930031C03Rik|AL033301|SPTB2|Spnb-2|Spnb2|elf1|elf3|mKIAA4049	spectrin beta, non-erythrocytic 1	protein-coding
common_peak1-18547-45-39-0.538429930457509-1.11442465192823	chr8	95488013	95489239	+	0	NA	intron (NM_009209, intron 1 of 13)	intron (NM_009209, intron 1 of 13)	3680	NM_009209	20538	Mm.57040	NM_009209	ENSMUSG00000055368	Slc6a2	NE-T|NET|Slc6a5	solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2	protein-coding
common_peak2-21770-40-56--0.173914331413643-0.351783812734557	chr11	116842598	116843634	+	0	NA	intron (NM_172948, intron 14 of 16)	intron (NM_172948, intron 14 of 16)	62939	NM_172948	268510	Mm.35141	NM_172948	ENSMUSG00000043857	Mgat5b	C330018B01|GnT-IX|mGnTVB	mannoside acetylglucosaminyltransferase 5, isoenzyme B	protein-coding
unique_peak2-36656-9-12--0.510826311736872-0.394412252720706	chr3	19659312	19659851	+	0	NA	Intergenic	Intergenic	-64185	NM_205769	12918	Mm.290689	NM_205769	ENSMUSG00000049796	Crh	CRF|Gm1347	corticotropin releasing hormone	protein-coding
unique_peak2-33667-4-5--0.608423014574403-0.909929411522249	chr11	100913073	100913392	+	0	NA	intron (NM_001243049, intron 18 of 20)	intron (NM_001243049, intron 18 of 20)	-18176	NM_013792	27419	Mm.95452	NM_013792	ENSMUSG00000001751	Naglu	-	alpha-N-acetylglucosaminidase (Sanfilippo disease IIIB)	protein-coding
unique_peak1-159-6-4-0.24347001549294-0.989110657569874	chr1	73036612	73037136	+	0	NA	Intergenic	Intergenic	25599	NM_009407	21958	Mm.425024	NM_009407	ENSMUSG00000026182	Tnp1	Stp-1|TP1|Tp-1	transition protein 1	protein-coding
common_peak2-32264-8-9--0.316705676939792-1.03275496310833	chrX	10729505	10730044	+	0	NA	Intergenic	Intergenic	-146609	NM_001111037	100042922	Mm.374311	NM_001111037	ENSMUSG00000095208	Gm14483	OTTMUSG00000016789	predicted gene 14483	protein-coding
common_peak2-25598-58-41-0.903632512111736-2.95955828708081	chr19	8774157	8775483	+	0	NA	Intergenic	B1_Mur2|SINE|Alu	13567	NM_008577	17254	Mm.4114	NM_008577	ENSMUSG00000010095	Slc3a2	4F2|4F2HC|AI314110|Cd98|Ly-10|Ly-m10|Ly10|Mdu1|Mgp-2hc|NACAE	solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2	protein-coding
common_peak1-9976-12-26--1.10611151707583-1.26025077975594	chr13	17694313	17694903	+	0	NA	intron (NM_138654, intron 6 of 13)	MTD|LTR|MaLR	91991	NM_138654	192136	Mm.364180	NM_138654		Sugct	5033411D12Rik|D17907	succinyl-CoA glutarate-CoA transferase	protein-coding
common_peak2-22472-7-9--0.522837264589173-1.05908390183068	chr13	48545319	48545788	+	0	NA	Intergenic	MIRb|SINE|MIR	63226	NM_001164575	67911	Mm.251375	NM_026450	ENSMUSG00000050954	Zfp169	1700025J14Rik|4930429A13Rik|BE688704	zinc finger protein 169	protein-coding
common_peak1-14029-54-59-0.266195166021215-0.581628126678276	chr2	115779961	115781679	+	0	NA	intron (NM_010825, intron 8 of 11)	B4A|SINE|B4	109537	NM_001159569	17536	Mm.247566	NM_010825	ENSMUSG00000027210	Meis2	A430109D20Rik|Mrg1|Stra10	Meis homeobox 2	protein-coding
common_peak2-26212-45-49-0.216501835570147-0.465606867440093	chr2	26388422	26389744	+	0	NA	Intergenic	Intergenic	-29741	NM_008714	18128	Mm.290610	NM_008714	ENSMUSG00000026923	Notch1	9930111A19Rik|Mis6|N1|Tan1|lin-12	notch 1	protein-coding
common_peak2-30499-22-37--0.600643408356181-0.808568985218824	chr7	63939241	63940239	+	0	NA	Intergenic	L1Md_T|LINE|L1	444599	NM_021879	18431	Mm.137052	NM_021879	ENSMUSG00000030450	Oca2	D7H15S12|D7Icr28RN|D7Nic1|p	oculocutaneous albinism II	protein-coding
unique_peak2-37598-1-6--2.43441193227435-1.56314192529759	chr5	53547984	53548412	+	0	NA	intron (NM_172710, intron 9 of 23)	intron (NM_172710, intron 9 of 23)	56493	NM_172710	231238	Mm.235020	NM_172710	ENSMUSG00000029189	Sel1l3	2310045A20Rik|AI429585|mKIAA0746	sel-1 suppressor of lin-12-like 3 (C. elegans)	protein-coding
unique_peak1-6470-10-2-1.77145284428761-2.09384600808989	chr7	108986592	108987119	+	0	NA	promoter-TSS (NM_001122739)	promoter-TSS (NM_001122739)	-115	NM_010567	16332	Mm.476000	NM_010567	ENSMUSG00000032737	Inppl1	51C|SHIP2	inositol polyphosphate phosphatase-like 1	protein-coding
common_peak1-8260-12-25--1.05166373305345-1.1381569562463	chr10	21295969	21296502	+	0	NA	Intergenic	Intergenic	-16716	NR_027968	67692	Mm.54306	NM_183266		1700020N01Rik	-	RIKEN cDNA 1700020N01 gene	ncRNA
common_peak2-29799-16-6-1.31090872021046-1.49151883326344	chr6	91014241	91014634	+	0	NA	intron (NM_018815, intron 14 of 39)	intron (NM_018815, intron 14 of 39)	52383	NM_018815	54563	Mm.28162	NM_018815	ENSMUSG00000030091	Nup210	9830001L10|AI836801|Pom210|gp190|gp210	nucleoporin 210	protein-coding
common_peak1-9999-41-92--0.838010106259371-2.74580449436197	chr13	107888609	107890295	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	76802	NR_015471	100040322	Mm.133867	NR_015471		3830408C21Rik	-	RIKEN cDNA 3830408C21 gene	ncRNA
common_peak1-7646-101-85-0.827749482034322-4.5792507850491	chr1	72243526	72244836	+	0	NA	intron (NM_001005423, intron 1 of 4)	intron (NM_001005423, intron 1 of 4)	14700	NM_001005423	381269	Mm.422636	NM_001005423	ENSMUSG00000039395	Mreg	Gm974|Wdt2|dsu	melanoregulin	protein-coding
unique_peak1-3975-31-11-1.64027617009197-3.52967372072617	chr2	32597265	32598702	+	0	NA	intron (NR_045535, intron 4 of 12)	intron (NR_045535, intron 4 of 12)	-1447	NM_027529	70730	Mm.401360	NM_027529	ENSMUSG00000009551	6330409D20Rik	AA517851	RIKEN cDNA 6330409D20 gene	protein-coding
common_peak2-29876-14-17--0.270708841084668-0.328191099940267	chr6	108688326	108689099	+	0	NA	Intergenic	Intergenic	-44341	NM_026011	67166	Mm.271178	NM_026011	ENSMUSG00000030105	Arl8b	2610313E07Rik|3100002J04Rik|Arl10c|gie1	ADP-ribosylation factor-like 8B	protein-coding
common_peak1-16014-29-52--0.615630373948088-1.02702006187975	chr5	34761563	34762623	+	0	NA	intron (NM_001243123, intron 2 of 20)	(TTCC)n|Simple_repeat|Simple_repeat	49511	NM_001243123	231128	Mm.286885	NM_001030306	ENSMUSG00000037210	Fam193a	-	family with sequence similarity 193, member A	protein-coding
unique_peak1-3363-12-5-1.06381348436648-1.78669045979184	chr19	47464172	47464793	+	0	NA	intron (NM_001164717, intron 3 of 13)	B3A|SINE|B2	74419	NM_001164717	14218	Mm.127560	NM_008018	ENSMUSG00000053617	Sh3pxd2a	2310014D11Rik|AA589508|AI256723|AI413738|C230050L11|EG329070|Fish|Gm5098|Sh3md1|TSK5|Tks5	SH3 and PX domains 2A	protein-coding
unique_peak1-4407-26-11-1.34293659143731-2.2880788707084	chr2	167406853	167408140	+	0	NA	Intergenic	MIRm|SINE|MIR	43769	NM_011427	20613	Mm.2093	NM_011427	ENSMUSG00000042821	Snai1	AI194338|Sna|Sna1|Snail|Snail1	snail family zinc finger 1	protein-coding
unique_peak1-6312-8-3-1.00522241794757-1.39487600375387	chr7	44374210	44374720	+	0	NA	Intergenic	Intergenic	2145439	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak2-36284-4-15--2.02346051385325-2.4322161449009	chr2	69380439	69381120	+	0	NA	intron (NM_001081088, intron 4 of 78)	MIR|SINE|MIR	43345	NM_001081088	14725	Mm.23847	NM_001081088	ENSMUSG00000027070	Lrp2	AI315343|AW536255|D230004K18Rik|Gp330|Megalin|b2b1625.2Clo	low density lipoprotein receptor-related protein 2	protein-coding
unique_peak2-37516-3-7--1.41398308995928-1.23214870625617	chr5	20945050	20945372	+	0	NA	intron (NM_177869, intron 4 of 7)	intron (NM_177869, intron 4 of 7)	14490	NM_177869	330050	Mm.40655	NM_177869	ENSMUSG00000047221	Fam185a	4631428I10|AI847670	family with sequence similarity 185, member A	protein-coding
common_peak2-22275-29-27-0.304935158557507-0.525808162491371	chr13	8885535	8886006	+	0	NA	intron (NM_145360, intron 1 of 4)	intron (NM_145360, intron 1 of 4)	918	NM_145360	319554	Mm.29847	NM_145360	ENSMUSG00000058258	Idi1	4832416K17Rik	isopentenyl-diphosphate delta isomerase	protein-coding
unique_peak2-35787-0-6--3.64748585253182-1.56314192529759	chr18	56431632	56432020	+	0	NA	Intergenic	Intergenic	-159960	NM_026240	107022	Mm.24356	NM_026240	ENSMUSG00000001700	Gramd3	9030613F08Rik|9130427A09Rik|AW061306|NS3TP2	GRAM domain containing 3	protein-coding
common_peak1-12763-21-14-0.662598669657717-0.879255460030357	chr18	60660548	60661426	+	0	NA	intron (NM_134133, intron 1 of 1)	intron (NM_134133, intron 1 of 1)	650	NM_134133	106878	Mm.273197	NM_134133	ENSMUSG00000038059	Smim3	2010002N04Rik|AI195350|AW561905|Nid67|cI-41	small integral membrane protein 3	protein-coding
common_peak2-21971-16-9-0.796335547380699-0.844317084070804	chr12	49381629	49382096	+	0	NA	Intergenic	Intergenic	-1102008	NM_001160112	15228	Mm.4704	NM_008241	ENSMUSG00000020950	Foxg1	2900064B05Rik|BF-1|Bf1|Hfh9|Hfhbf1	forkhead box G1	protein-coding
common_peak2-30850-18-17-0.142994149786039-0.353907621462753	chr7	135604353	135605261	+	0	NA	5' UTR (NM_009383, exon 1 of 12)	5' UTR (NM_009383, exon 1 of 12)	220	NM_009383	21843	Mm.242072	NM_009383	ENSMUSG00000030846	Tial1	5330433G13Rik|AL033329|TIAR|mTIAR	Tia1 cytotoxic granule-associated RNA binding protein-like 1	protein-coding
unique_peak2-37991-1-6--2.43441193227435-1.56314192529759	chr6	21950357	21950603	+	0	NA	intron (NM_001081351, intron 1 of 21)	intron (NM_001081351, intron 1 of 21)	14570	NM_001081351	214642	Mm.221404	NM_001081351	ENSMUSG00000062980	Cped1	6720481P07|A430107O13Rik|AI552584	cadherin-like and PC-esterase domain containing 1	protein-coding
common_peak1-17772-58-96--0.303962907296631-0.66019930050255	chr7	92740526	92741585	+	0	NA	Intergenic	Lx2|LINE|L1	-22917	NM_001105184	233445	Mm.389930	NM_001105184	ENSMUSG00000091205	Vmn2r71	EG233445	vomeronasal 2, receptor 71	protein-coding
unique_peak2-34775-1-10--3.08648862885404-2.57096726280955	chr15	59584577	59585119	+	0	NA	Intergenic	Intergenic	41666	NR_045076	100503021	Mm.402924	NR_045076		Gm19510	-	predicted gene, 19510	ncRNA
unique_peak2-33014-6-8--0.60452689106201-1.03789460276074	chr10	66355345	66355808	+	0	NA	Intergenic	B1_Mur4|SINE|Alu	-112247	NR_110511	102634101	Mm.445258	NR_110511		LOC102634101	-	uncharacterized LOC102634101	ncRNA
unique_peak1-4668-7-1-1.79909083029819-1.80617997398389	chr3	92579646	92580166	+	0	NA	Intergenic	Intergenic	2915	NM_029667	76585	Mm.291782	NM_029667	ENSMUSG00000068888	Lce1i	2310069N01Rik	late cornified envelope 1I	protein-coding
common_peak2-21762-24-20-0.400892479988956-0.591915184368645	chr11	116167193	116168286	+	0	NA	exon (NM_001162872, exon 2 of 18)	exon (NM_001162872, exon 2 of 18)	313	NM_016857	53413	Mm.22530	NM_016857	ENSMUSG00000020792	Exoc7	Exo70|sec70	exocyst complex component 7	protein-coding
common_peak2-28514-78-75-0.55889358071695-1.90127205594093	chr5	77265542	77267051	+	0	NA	Intergenic	Intergenic	-3328	NM_001163793	320827	Mm.101504	NM_001163793	ENSMUSG00000036377	C530008M17Rik	2810489J07Rik|4930529A19Rik|4931405B09Rik|Kiaa1211|mKIAA1211	RIKEN cDNA C530008M17 gene	protein-coding
unique_peak2-39568-2-10--2.37688587490062-2.09384600808989	chr9	71574318	71574916	+	0	NA	intron (NM_026599, intron 1 of 18)	intron (NM_026599, intron 1 of 18)	44792	NM_026599	68178	Mm.99961	NM_026599	ENSMUSG00000032232	Cgnl1	4933421H10Rik|9930020M10Rik|AI503810|Jacop	cingulin-like 1	protein-coding
common_peak2-27699-21-27--0.237865656791368-0.339372226903478	chr3	121721146	121722427	+	0	NA	Intergenic	ORR1B1|LTR|MaLR	-25592	NM_007378	11304	Mm.3918	NM_007378	ENSMUSG00000028125	Abca4	AW050280|Abc10|Abcr|D430003I15Rik|RmP	ATP-binding cassette, sub-family A (ABC1), member 4	protein-coding
common_peak2-21342-9-14--0.717277189204299-0.53895475198017	chr11	76857478	76857907	+	0	NA	TTS (NM_001012309)	TTS (NM_001012309)	33982	NR_030756	751519		NR_030756		Mir423	Mirn423|mmu-mir-423	microRNA 423	ncRNA
unique_peak2-35502-13-18--0.469455482805817-0.409888142029227	chr17	46711456	46712449	+	0	NA	intron (NM_175168, intron 13 of 19)	intron (NM_175168, intron 13 of 19)	-18841	NM_020493	20807	Mm.45044	NM_020493	ENSMUSG00000015605	Srf	AW049942|AW240594	serum response factor	protein-coding
unique_peak2-37620-9-7-0.18961340640422-1.05908390183068	chr5	65439056	65439422	+	0	NA	Intergenic	Intergenic	77682	NR_030577	100124451		NR_030577	miRBase:MI0005518	Mir574	Mirn574|mmu-mir-574	microRNA 574	ncRNA
unique_peak2-38474-4-7--1.02346051385325-1.09384600808989	chr7	29470443	29470879	+	0	NA	Intergenic	MERVL_2A-int|LTR|ERVL	-7207	NM_207238	233040	Mm.116116	NM_207238	ENSMUSG00000037463	Fbxo27	E130008B10Rik|FBG5|Gm161	F-box protein 27	protein-coding
common_peak1-15407-12-16--0.4386868561627-0.368541233333383	chr4	86634481	86635113	+	0	NA	3' UTR (NM_001110240, exon 10 of 10)	3' UTR (NM_001110240, exon 10 of 10)	114479	NM_139306	230379	Mm.45019	NM_139306	ENSMUSG00000038007	Acer2	2410116I05Rik|Asah3l|CRG-L1|maCER2	alkaline ceramidase 2	protein-coding
common_peak2-31878-13-35--1.39145297080454-2.32006591355687	chr9	55208740	55209499	+	0	NA	intron (NM_172923, intron 1 of 10)	MER5A1|DNA|MER1_type	34363	NM_172923	244886	Mm.24361	NM_172923	ENSMUSG00000032313	AI118078	9630029F15	expressed sequence AI118078	protein-coding
common_peak1-14958-43-59--0.124327410084816-0.331513058069911	chr3	104637674	104639283	+	0	NA	intron (NM_009797, intron 5 of 9)	MTC|LTR|MaLR	-16997	NM_001163440	17454	Mm.1597	NM_008619	ENSMUSG00000002227	Mov10	C77703|Mov-10	Moloney leukemia virus 10	protein-coding
common_peak1-18995-8-12--0.695217300193522-0.475924844171029	chr9	57910413	57910853	+	0	NA	intron (NM_001166282, intron 10 of 19)	intron (NM_001166282, intron 10 of 19)	30552	NM_001243265	330951	Mm.406992	NM_001243265		Gm16130	E330033L03|OTTMUSG00000030814	predicted gene 16130	protein-coding
unique_peak1-3023-23-13-0.914412582451476-1.26025077975594	chr17	93525520	93526591	+	0	NA	Intergenic	Intergenic	-72707	NM_009625	11516	Mm.3407	NM_009625	ENSMUSG00000024256	Adcyap1	PACAP	adenylate cyclase activating polypeptide 1	protein-coding
common_peak1-11642-25-18-0.613922391901521-0.86528749982161	chr16	22201437	22202744	+	0	NA	Intergenic	Intergenic	-38718	NM_183029	319765	Mm.489442	NM_183029	ENSMUSG00000033581	Igf2bp2	C330012H03Rik|IMP-2|Imp2|Neilsen	insulin-like growth factor 2 mRNA binding protein 2	protein-coding
common_peak2-32247-31-87--1.23419294782417-4.80609926617907	chrX	157597671	157598996	+	0	NA	Intergenic	Intergenic	-2349	NM_001290652	107815	Mm.159173	NM_133194	ENSMUSG00000000037	Scml2	4932420G07Rik	sex comb on midleg-like 2 (Drosophila)	protein-coding
unique_peak2-34954-3-6--1.22133801201688-1.08602067057793	chr15	93273217	93273586	+	0	NA	intron (NM_001083114, intron 4 of 7)	intron (NM_001083114, intron 4 of 7)	44506	NM_001285863	223828	Mm.74208	NM_146062	ENSMUSG00000036167	Pphln1	CR|HSPC206|HSPC232	periphilin 1	protein-coding
common_peak1-12844-102-186--0.275805983048082-0.95599536039865	chr18	73572669	73574126	+	0	NA	Intergenic	Lx8|LINE|L1	-158962	NM_001039214	240396	Mm.24131	NM_001039214	ENSMUSG00000037253	Mex3c	A130001D14Rik|BC035207|BM-013|Rkhd2	mex3 homolog C (C. elegans)	protein-coding
common_peak1-10812-14-14--0.00767443525087419-0.308519316180257	chr14	79519116	79519841	+	0	NA	intron (NM_027906, intron 37 of 44)	intron (NM_027906, intron 37 of 44)	127696	NM_001033215	105590	Mm.486536	NM_001033215	ENSMUSG00000071262	Zfp957	AU017455	zinc finger protein 957	protein-coding
unique_peak2-34421-2-8--2.08737925770563-1.65811743852845	chr14	18271174	18271501	+	0	NA	Intergenic	ORR1A1|LTR|MaLR	-222137	NM_001113417	21834	Mm.32563	NM_009380	ENSMUSG00000021779	Thrb	Nr1a2|T3R[b]|T3Rbeta|Thrb1|Thrb2|c-erbAbeta	thyroid hormone receptor beta	protein-coding
common_peak1-12036-8-12--0.695217300193522-0.475924844171029	chr17	17837414	17837909	+	0	NA	Intergenic	MuRRS-int|LTR|ERV1	-3244	NM_001104539	626942	Mm.404019	NM_001104539	ENSMUSG00000092120	Vmn2r90	EG626942	vomeronasal 2, receptor 90	protein-coding
common_peak1-14004-31-45--0.29832328524389-0.470780655014941	chr2	105016331	105017444	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	-47612	NM_028747	74088	Mm.46188	NM_028747	ENSMUSG00000055312	Them7	0610012H03Rik	thioesterase superfamily member 7	protein-coding
unique_peak1-5054-10-3-1.35641534500877-1.75805390616669	chr4	135810643	135811178	+	0	NA	intron (NM_011542, intron 3 of 10)	intron (NM_011542, intron 3 of 10)	7038	NM_011542	21401	Mm.112	NM_011542	ENSMUSG00000001604	Tcea3	S-II|SII-K1	transcription elongation factor A (SII), 3	protein-coding
common_peak2-26403-40-69--0.470307334193868-0.889546191492175	chr2	58566393	58567771	+	0	NA	intron (NM_001289660, intron 1 of 7)	L1MA4A|LINE|L1	-40513	NM_001289659	76654	Mm.200370	NM_029692	ENSMUSG00000026839	Upp2	1700124F02Rik|AI266885|UDRPASE2|UP2|UPASE2	uridine phosphorylase 2	protein-coding
unique_peak1-1259-8-4-0.683294323060208-1.21878474469819	chr11	116616622	116617085	+	0	NA	non-coding (NR_003364, exon 4 of 4)	non-coding (NR_003364, exon 4 of 4)	3372	NR_003364	193217	Mm.100084	NR_003364		BC018473	-	cDNA sequence BC018473	ncRNA
common_peak1-11428-21-20-0.177171842487475-0.380101753845079	chr15	99771580	99772475	+	0	NA	Intergenic	Intergenic	-9938	NM_028180	72277	Mm.272766	NM_028180	ENSMUSG00000045350	1700030F18Rik	FAM186A	RIKEN cDNA 1700030F18 gene	protein-coding
common_peak2-29086-47-63--0.0651585752334523-0.308035049112909	chr5	121451955	121453519	+	0	NA	intron (NM_011286, intron 2 of 21)	intron (NM_011286, intron 2 of 21)	6790	NM_011286	19894	Mm.181166	NM_011286	ENSMUSG00000029608	Rph3a	2900002P20Rik|AU022689|AW108370	rabphilin 3A	protein-coding
unique_peak1-1400-17-2-2.63333383748388-3.75443312462699	chr12	70720176	70720876	+	0	NA	intron (NM_001135559, intron 8 of 22)	RSINE1|SINE|B4	-36511	NM_001033236	207965	Mm.102487	NM_001033236	ENSMUSG00000049882	Vcpkmt	Gm71|Mettl21d|Mettl221d|VCP-KMT	valosin containing protein lysine (K) methyltransferase	protein-coding
common_peak2-27349-65-135--0.595296901773212-2.26859704136827	chr3	79180579	79182475	+	0	NA	intron (NM_001142953, intron 1 of 4)	L1MA4|LINE|L1	32229	NM_001142953	100233207	Mm.373801	NM_001142953	ENSMUSG00000091685	Gm17359	-	predicted gene, 17359	protein-coding
common_peak2-28274-15-18--0.235762762887929-0.326591483156968	chr4	129058174	129058691	+	0	NA	Intergenic	Intergenic	-3160	NM_028603	73680	Mm.32997	NM_028603	ENSMUSG00000028807	Zbtb8a	2410081M15Rik|AI480941	zinc finger and BTB domain containing 8a	protein-coding
unique_peak2-38452-1-6--2.43441193227435-1.56314192529759	chr7	28383231	28383634	+	0	NA	intron (NM_001110208, intron 1 of 13)	PB1D10|SINE|Alu	6853	NM_001110208	11652	Mm.177194	NM_007434	ENSMUSG00000004056	Akt2	2410016A19Rik|AW554154|PKB|PKBbeta	thymoma viral proto-oncogene 2	protein-coding
common_peak2-26450-7-7--0.200909169701811-0.97990265578305	chr2	71640550	71640874	+	0	NA	intron (NM_001277970, intron 1 of 24)	intron (NM_001277970, intron 1 of 24)	15716	NM_001277970	16403	Mm.225096	NM_008397		Itga6	5033401O05Rik|AI115430|Cd49f|VLA-6	integrin alpha 6	protein-coding
common_peak2-21752-9-10--0.269818212233077-1.05503135781948	chr11	115957777	115958275	+	0	NA	Intergenic	PB1D10|SINE|Alu	-9748	NM_016852	22378	Mm.284792	NM_016852	ENSMUSG00000034341	Wbp2	-	WW domain binding protein 2	protein-coding
unique_peak1-2577-10-4-1.03448725012141-1.5150158574804	chr16	30024974	30025581	+	0	NA	intron (NR_045878, intron 3 of 3)	intron (NR_045878, intron 3 of 3)	14288	NR_045878	71528	Mm.297640	NR_045878		9030404E10Rik	-	RIKEN cDNA 9030404E10 gene	ncRNA
common_peak2-28718-10-6-0.549060422951165-1.21398586181642	chr5	35743809	35744204	+	0	NA	Intergenic	Intergenic	12240	NM_010445	15371	Mm.358606	NM_010445	ENSMUSG00000067438	Hmx1	Nkx5-3	H6 homeobox 1	protein-coding
unique_peak2-33726-3-5--0.998945590680433-0.96108193396963	chr11	115277422	115277712	+	0	NA	intron (NM_027862, intron 4 of 5)	intron (NM_027862, intron 4 of 5)	3666	NM_027862	71679	Mm.371641	NM_027862	ENSMUSG00000034566	Atp5h	0610009D10Rik	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit D	protein-coding
unique_peak1-2941-9-4-0.867685311516858-1.36011389749466	chr17	65665988	65666509	+	0	NA	intron (NM_001289485, intron 14 of 15)	intron (NM_001289485, intron 14 of 15)	223874	NM_001008973	381107	Mm.141275	NM_001008973	ENSMUSG00000045036	Tmem232	E130009J12Rik|Gm940|Tes13-L|Tes13-S	transmembrane protein 232	protein-coding
common_peak1-19454-43-27-0.975208263466099-2.41952329912175	chrX	103556907	103558664	+	0	NA	Intergenic	L1_Mus2|LINE|L1	52620	NR_105803	102465963		NR_105803	miRBase:MI0021913	Mir6382	mmu-mir-6382	microRNA mir-6382	ncRNA
common_peak1-10802-28-18-0.805031606377877-1.27334590136207	chr14	76946595	76947955	+	0	NA	intron (NR_027699, intron 3 of 4)	intron (NR_027699, intron 3 of 4)	9219	NM_001160326	72661	Mm.320384	NM_001160326	ENSMUSG00000052584	Serp2	2810032E02Rik	stress-associated endoplasmic reticulum protein family member 2	protein-coding
common_peak2-26753-20-19-0.16614668970383-0.348739088570342	chr2	136891875	136892580	+	0	NA	intron (NM_001038641, intron 7 of 7)	intron (NM_001038641, intron 7 of 7)	50029	NM_013822	16449	Mm.22398	NM_013822	ENSMUSG00000027276	Jag1	ABE2|Gsfabe2|Htu|Ozz|Ser-1	jagged 1	protein-coding
unique_peak2-36816-0-6--3.64748585253182-1.56314192529759	chr3	87421762	87422197	+	0	NA	promoter-TSS (NM_001003912)	promoter-TSS (NM_001003912)	-694	NM_001003912	213498	Mm.287267	NM_001003912	ENSMUSG00000041977	Arhgef11	B930073M02|E130307F09|PDZ-RhoGEF|Prg|RhoGEF|mKIAA0380	Rho guanine nucleotide exchange factor (GEF) 11	protein-coding
unique_peak2-36768-4-6--0.830815435910851-0.989110657569874	chr3	65844913	65845345	+	0	NA	Intergenic	L1MA7|LINE|L1	-82982	NM_019937	56706	Mm.175612	NM_019937	ENSMUSG00000027829	Ccnl1	2610030E23Rik|AU018493|Ccnl|ania-6a	cyclin L1	protein-coding
unique_peak1-1488-7-3-0.799090830298189-1.23214870625617	chr12	119440046	119440563	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-2788	NM_010060	13411	Mm.390540	NM_010060	ENSMUSG00000018581	Dnah11	Dnahc11|b2b1203Clo|b2b1279Clo|b2b1289Clo|b2b1727Clo|b2b598Clo|iv|lrd	dynein, axonemal, heavy chain 11	protein-coding
common_peak1-15419-19-20-0.0103699038829257-0.306326795069978	chr4	88799529	88800336	+	0	NA	intron (NM_024433, intron 3 of 7)	B3|SINE|B2	16658	NM_024433	66902	Mm.28500	NM_024433	ENSMUSG00000062937	Mtap	1300019I21Rik|MSAP	methylthioadenosine phosphorylase	protein-coding
common_peak1-16454-31-42--0.201026083888975-0.369793428364259	chr5	135956919	135958428	+	0	NA	intron (NM_146001, intron 1 of 30)	intron (NM_146001, intron 1 of 30)	63319	NM_146001	215114	Mm.280805	NM_146001	ENSMUSG00000039959	Hip1	2610109B09Rik|A930014B11Rik|E130315I21Rik|mKIAA4113	huntingtin interacting protein 1	protein-coding
unique_peak2-38687-3-7--1.41398308995928-1.23214870625617	chr7	101347947	101348328	+	0	NA	Intergenic	Intergenic	1119748	NM_021427	58238	Mm.113787	NM_021427		Fam181b	A830059I20Rik|AB041569	family with sequence similarity 181, member B	protein-coding
common_peak1-13857-39-17-1.44583624547684-3.81634954855125	chr2	65227439	65228966	+	0	NA	Intergenic	Intergenic	-25745	NR_105755	102466151		NR_105755	miRBase:MI0021865	Mir6337	mmu-mir-6337	microRNA mir-6337	ncRNA
unique_peak1-3987-7-0-2.79909083029819-2.40823996531185	chr2	34611901	34612357	+	0	NA	Intergenic	Intergenic	-1377	NM_025709	66691	Mm.156452	NM_025709	ENSMUSG00000026867	Gapvd1	2010005B09Rik|4432404J10Rik|AW108497|Gapex-5|RAP6|RME-6|mKIAA1521	GTPase activating protein and VPS9 domains 1	protein-coding
common_peak2-22754-19-20-0.0103699038829257-0.306326795069978	chr13	113617723	113618514	+	0	NA	intron (NM_008903, intron 1 of 5)	intron (NM_008903, intron 1 of 5)	27133	NM_008247	19012	Mm.317186	NM_008247	ENSMUSG00000021759	Ppap2a	Hic53|Hpic53|LPP-1|LPP1|PAP-2a|PAP2-alpha|PAP2a|mPAP	phosphatidic acid phosphatase type 2A	protein-coding
common_peak1-9092-10-10--0.103016273628528-0.301029995663987	chr11	69981218	69981705	+	0	NA	exon (NM_001204252, exon 2 of 10)	exon (NM_001204252, exon 2 of 10)	1336	NM_010796	17312	Mm.252405	NM_010796	ENSMUSG00000000318	Clec10a	CD301a|M-ASGP-BP-1|Mgl|Mgl1	C-type lectin domain family 10, member A	protein-coding
unique_peak2-32792-8-6-0.197867495889966-1.03789460276074	chr1	181230398	181230879	+	0	NA	intron (NM_027188, intron 5 of 11)	intron (NM_027188, intron 5 of 11)	217496	NM_027188	69726	Mm.222338	NM_027188		Smyd3	2410008A19Rik|Zmynd1	SET and MYND domain containing 3	protein-coding
unique_peak1-3818-27-0-4.99154595089524-NA	chr2	71532092	71533101	+	0	NA	Intergenic	B4|SINE|B4	-24878	NR_037979	381371	Mm.330284	NM_201366	ENSMUSG00000064263	Gm1631	-	predicted gene 1631	ncRNA
common_peak2-30884-23-19-0.399839409621718-0.538442145997695	chr7	141339851	141340589	+	0	NA	intron (NM_007400, intron 2 of 22)	(CATATA)n|Simple_repeat|Simple_repeat	76560	NM_007400	11489	Mm.439714	NM_007400	ENSMUSG00000054555	Adam12	Mltna|mKIAA4001	a disintegrin and metallopeptidase domain 12 (meltrin alpha)	protein-coding
common_peak1-16220-13-12-0.0780323124966764-0.334470287753051	chr5	99252095	99252826	+	0	NA	Intergenic	Intergenic	-30998	NM_173404	110075	Mm.209571	NM_173404	ENSMUSG00000029335	Bmp3	9130206H07|9530029I04Rik	bone morphogenetic protein 3	protein-coding
common_peak2-23673-41-36-0.49169533921971-0.936258361511365	chr15	85666302	85667016	+	0	NA	intron (NM_001033337, intron 4 of 13)	intron (NM_001033337, intron 4 of 13)	3925	NM_001033337	239570	Mm.151748	NM_001033337	ENSMUSG00000035944	Ttc38	9030019H09	tetratricopeptide repeat domain 38	protein-coding
common_peak1-8737-77-128--0.226700675867257-0.596924666573505	chr11	3648046	3650018	+	0	NA	intron (NM_152818, intron 2 of 13)	B1_Mus1|SINE|Alu	90329	NM_198162	74522	Mm.139127	NM_198162	ENSMUSG00000034543	Morc2a	8430403M08Rik|Zcwcc1	microrchidia 2A	protein-coding
common_peak2-30639-8-7-0.00522241794757061-1.00793137938329	chr7	98170788	98171220	+	0	NA	Intergenic	Intergenic	-68292	NM_011807	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
common_peak2-32183-43-58--0.100079863838139-0.318326940901209	chr9	115309219	115310569	+	0	NA	Intergenic	Intergenic	64615	NR_040730	73856	Mm.399156	NR_040730		4930428G15Rik	-	RIKEN cDNA 4930428G15 gene	ncRNA
unique_peak1-1038-8-4-0.683294323060208-1.21878474469819	chr11	76622556	76623093	+	0	NA	intron (NM_007754, intron 6 of 20)	intron (NM_007754, intron 6 of 20)	37686	NM_007754	12874	Mm.276736	NM_007754	ENSMUSG00000020841	Cpd	AA960140|AW322530|D830034L15Rik	carboxypeptidase D	protein-coding
unique_peak2-34996-6-11--1.01956439034085-1.32595962126035	chr15	99588893	99589456	+	0	NA	intron (NM_028015, intron 1 of 9)	ORR1B2|LTR|MaLR	13772	NM_028015	71949	Mm.390821	NM_028015		Cers5	2310081H14Rik|AU045339|AW544927|Lass5|Trh4	ceramide synthase 5	protein-coding
common_peak1-9236-10-14--0.550475250599749-0.446472590016315	chr11	86201424	86201811	+	0	NA	Intergenic	RSINE1|SINE|B4	-30590	NM_001080931	327987	Mm.341886	NM_001080931	ENSMUSG00000034297	Med13	1110067M05Rik|D030023K18|Thrap1|Trap240	mediator complex subunit 13	protein-coding
unique_peak2-36536-7-17--1.37083417114412-1.23399803405144	chr2	164486317	164487061	+	0	NA	Intergenic	L1M3e|LINE|L1	5143	NM_001039501	629756	Mm.189007	NM_001039501	ENSMUSG00000070529	Wfdc10	Gm120|OTTMUSG00000016289	WAP four-disulfide core domain 10	protein-coding
unique_peak1-7433-10-1-2.35641534500877-2.57096726280955	chrX	167194307	167194766	+	0	NA	Intergenic	Intergenic	-777687	NR_029457	654820	Mm.34441	NM_001039559	ENSMUSG00000072844	G530011O06Rik	-	RIKEN cDNA G530011O06 gene	ncRNA
unique_peak2-34388-7-19--1.52283726458917-1.55050753388976	chr13	119690336	119690954	+	0	NA	Intergenic	Intergenic	187139	NM_008002	14165	Mm.317323	NM_008002	ENSMUSG00000021732	Fgf10	AEY17|BB213776|Fgf-10|Gsfaey17	fibroblast growth factor 10	protein-coding
unique_peak1-6543-8-4-0.683294323060208-1.21878474469819	chr7	126975334	126975888	+	0	NA	intron (NM_028129, intron 9 of 13)	intron (NM_028129, intron 9 of 13)	37910	NM_001004187	434234	Mm.38237	NM_028129	ENSMUSG00000030924	2610020H08Rik	-	RIKEN cDNA 2610020H08 gene	protein-coding
unique_peak2-32854-8-22--1.51833953810944-1.77631109801764	chr10	39730768	39731364	+	0	NA	intron (NM_144821, intron 1 of 3)	RLTR9E|LTR|ERVK	14008	NM_144821	215929	Mm.55513	NM_144821	ENSMUSG00000038522	AI317395	AI482555|Naglt1a	expressed sequence AI317395	protein-coding
unique_peak1-2580-12-2-2.06381348436648-2.79529063155376	chr16	30058166	30058731	+	0	NA	Intergenic	Intergenic	-6995	NM_008235	15205	Mm.390859	NM_008235	ENSMUSG00000022528	Hes1	Hry|bHLHb39	hairy and enhancer of split 1 (Drosophila)	protein-coding
common_peak1-12682-13-13--0.0288828914198356-0.309074325783021	chr18	38366867	38367597	+	0	NA	intron (NM_029357, intron 1 of 2)	B1_Mus2|SINE|Alu	2184	NM_029357	75599	Mm.36560	NM_029357	ENSMUSG00000051375	Pcdh1	2010005A06Rik|AI585920	protocadherin 1	protein-coding
common_peak1-16732-14-6-1.09186123830004-1.16633110333236	chr6	31076596	31077167	+	0	NA	intron (NR_110471, intron 3 of 3)	intron (NR_110471, intron 3 of 3)	-63788	NR_029532	387223		NR_029532	miRBase:MI0000143	Mir29b-1	Mirn29b|Mirn29b-1	microRNA 29b-1	ncRNA
common_peak2-29926-46-29-0.991105347640283-2.69560598044942	chr6	115503680	115504825	+	0	NA	intron (NM_199033, intron 4 of 11)	intron (NM_199033, intron 4 of 11)	9530	NM_199033	381802	Mm.291208	NM_199033	ENSMUSG00000042389	Tsen2	AU067695	tRNA splicing endonuclease 2 homolog (S. cerevisiae)	protein-coding
common_peak2-23906-14-6-1.09186123830004-1.16633110333236	chr16	4726377	4726774	+	0	NA	intron (NM_001136066, intron 1 of 5)	CpG	214	NM_001136066	15369	Mm.272866	NM_010443	ENSMUSG00000004070	Hmox2	HO-2|HO2	heme oxygenase (decycling) 2	protein-coding
common_peak1-8349-27-51--0.708893767245856-1.25391625579201	chr10	56378328	56379354	+	0	NA	Intergenic	Intergenic	281735	NM_010288	14609	Mm.378921	NM_010288	ENSMUSG00000050953	Gja1	AU042049|AW546267|Cnx43|Cx43|Cx43alpha1|Gja-1|Npm1|connexin43	gap junction protein, alpha 1	protein-coding
common_peak1-15932-54-78--0.130694986547369-0.353159239817814	chr5	25498122	25500407	+	0	NA	Intergenic	Intergenic	233420	NM_001004365	242894	Mm.150319	NM_001004365	ENSMUSG00000056367	Actr3b	9630005C02|ARP11|AW047569|Arp3b|Arp3beta	ARP3 actin-related protein 3B	protein-coding
common_peak1-19233-10-15--0.643584654991231-0.519648556297791	chr9	108305457	108306038	+	0	NA	TTS (NM_001135198)	TTS (NM_001135198)	10582	NM_053216	112418	Mm.78287	NM_053216	ENSMUSG00000032611	1700102P08Rik	AI593206	RIKEN cDNA 1700102P08 gene	protein-coding
unique_peak1-1418-10-6-0.549060422951165-1.21398586181642	chr12	80223841	80224570	+	0	NA	Intergenic	MT2_Mm|LTR|ERVL	-7570	NM_009705	11847	Mm.3506	NM_009705	ENSMUSG00000021125	Arg2	AII|AU022422	arginase type II	protein-coding
unique_peak2-36822-4-9--1.34538860874061-1.36011389749466	chr3	88146629	88147157	+	0	NA	exon (NM_178246, exon 4 of 22)	exon (NM_178246, exon 4 of 22)	6711	NM_178246	229512	Mm.439830	NM_173188	ENSMUSG00000001415	Smg5	BC024683|mKIAA1089	Smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans)	protein-coding
common_peak1-10286-15-10-0.552733131918359-0.604422558181019	chr13	63071732	63072381	+	0	NA	intron (NM_001289926, intron 1 of 15)	intron (NM_001289926, intron 1 of 15)	5803	NM_001289924	72061	Mm.188105	NM_028079	ENSMUSG00000021458	2010111I01Rik	2300006M17Rik|AP-O|Aopep	RIKEN cDNA 2010111I01 gene	protein-coding
unique_peak2-36889-4-9--1.34538860874061-1.36011389749466	chr3	95669193	95669762	+	0	NA	intron (NM_078479, intron 1 of 1)	intron (NM_078479, intron 1 of 1)	5065	NM_078479	66292	Mm.24108	NM_078479	ENSMUSG00000054312	Mrps21	1810031B19Rik	mitochondrial ribosomal protein S21	protein-coding
common_peak2-20080-11-6-0.701338662194009-1.32595962126035	chr1	155075190	155075576	+	0	NA	intron (NM_010683, intron 24 of 27)	intron (NM_010683, intron 24 of 27)	-41806	NM_008485	16782	Mm.329272	NM_008485	ENSMUSG00000026479	Lamc2	AA589349	laminin, gamma 2	protein-coding
common_peak1-10638-13-6-0.971117108580164-1.01572999746118	chr14	46517499	46518241	+	0	NA	Intergenic	Lx7|LINE|L1	-185832	NR_002875	218963	Mm.282093	NR_002875		Gm1821	-	ubiquitin pseudogene	pseudo
unique_peak2-33436-2-7--1.91745425626332-1.45399745587252	chr11	60941907	60942268	+	0	NA	Intergenic	(T)n|Simple_repeat|Simple_repeat	-12250	NM_021349	57916	Mm.265915	NM_021349	ENSMUSG00000010142	Tnfrsf13b	1200009E08Rik|Taci	tumor necrosis factor receptor superfamily, member 13b	protein-coding
common_peak2-21763-19-12-0.702247608520594-0.840839978588874	chr11	116210349	116210924	+	0	NA	intron (NM_027258, intron 13 of 18)	intron (NM_027258, intron 13 of 18)	-13968	NM_008240	15223	Mm.378938	NM_008240	ENSMUSG00000034227	Foxj1	FKHL-13|HFH-4|Hfh4	forkhead box J1	protein-coding
common_peak2-31561-25-21-0.402418286707809-0.580176690544129	chr8	117121267	117122164	+	0	NA	intron (NM_019573, intron 5 of 8)	intron (NM_019573, intron 5 of 8)	158163	NM_019573	80707	Mm.440420	NM_019573	ENSMUSG00000004637	Wwox	5330426P09Rik|9030416C10Rik|WOX1	WW domain-containing oxidoreductase	protein-coding
unique_peak2-33209-9-35--1.98031159503809-3.86499617670048	chr10	115250734	115251504	+	0	NA	Intergenic	Intergenic	-3221	NM_001168680	216350	Mm.22270	NM_146010	ENSMUSG00000034127	Tspan8	C76990|E330007O21Rik|Tm4sf3	tetraspanin 8	protein-coding
unique_peak2-34031-4-11--1.6084230145744-1.68134727924692	chr12	111907603	111908124	+	0	NA	intron (NM_025488, intron 4 of 5)	B3|SINE|B2	12966	NM_025488	66323	Mm.273316	NM_025488	ENSMUSG00000056508	1700001K19Rik	-	RIKEN cDNA 1700001K19 gene	protein-coding
common_peak2-27701-15-11-0.4272022498345-0.503257505534083	chr3	121819316	121819873	+	0	NA	exon (NM_007378, exon 17 of 50)	exon (NM_007378, exon 17 of 50)	72216	NM_007378	11304	Mm.3918	NM_007378	ENSMUSG00000028125	Abca4	AW050280|Abc10|Abcr|D430003I15Rik|RmP	ATP-binding cassette, sub-family A (ABC1), member 4	protein-coding
common_peak2-21168-17-14-0.311405742596519-0.466170754204149	chr11	59450075	59450786	+	0	NA	Intergenic	Intergenic	23962	NM_001011740	257886	Mm.457883	NM_001011740	ENSMUSG00000044061	Olfr225	MOR256-51	olfactory receptor 225	protein-coding
common_peak1-11263-14-12-0.198776442216552-0.373562084705529	chr15	80948171	80948970	+	0	NA	intron (NM_001082536, intron 1 of 13)	intron (NM_001082536, intron 1 of 13)	-13093	NM_153049	223701	Mm.439814	NM_153049	ENSMUSG00000042292	Mkl1	AMKL|Bsac|Mal|Mrtf-A	MKL (megakaryoblastic leukemia)/myocardin-like 1	protein-coding
common_peak2-23857-26-24-0.284042902383738-0.446094173747083	chr15	102247220	102248236	+	0	NA	intron (NM_013672, intron 3 of 5)	B1_Mus2|SINE|Alu	10981	NM_013672	20683	Mm.4618	NM_013672	ENSMUSG00000001280	Sp1	1110003E12Rik|AA450830|AI845540|Sp1-1	trans-acting transcription factor 1	protein-coding
common_peak2-22137-56-66-0.169506634981471-0.425859000017569	chr12	85598271	85600017	+	0	NA	Intergenic	B4|SINE|B4	-27102	NM_029880	77219	Mm.246127	NM_029880	ENSMUSG00000072946	Ptgr2	1810016I24Rik|9130222H03Rik|9630002F03Rik|AI838763|B830026H24Rik|PGR-2|PRG-2|Zadh1	prostaglandin reductase 2	protein-coding
unique_peak2-35044-4-7--1.02346051385325-1.09384600808989	chr16	4478309	4478643	+	0	NA	Intergenic	Intergenic	44577	NM_175347	106393	Mm.35811	NM_175347	ENSMUSG00000022519	Srl	9830004M20Rik|AW108387|sar	sarcalumenin	protein-coding
common_peak1-17972-43-70--0.367183933980979-0.692838550835943	chr7	132851935	132853087	+	0	NA	intron (NM_001081022, intron 1 of 27)	intron (NM_001081022, intron 1 of 27)	1121	NM_001081022	233865	Mm.274389	NM_001081022	ENSMUSG00000032743	D430042O09Rik	Kiaa0556	RIKEN cDNA D430042O09 gene	protein-coding
unique_peak1-1037-13-1-2.77847203063777-3.64038867156802	chr11	76590225	76590876	+	0	NA	TTS (NM_007754)	TTS (NM_007754)	-13493	NM_016810	53334	Mm.20931	NM_016810	ENSMUSG00000010392	Gosr1	AI414660|AI426320|BB145494|GOS-28|GOSRI|GS28	golgi SNAP receptor complex member 1	protein-coding
unique_peak1-2645-10-4-1.03448725012141-1.5150158574804	chr16	45848006	45848619	+	0	NA	Intergenic	B1_Mur3|SINE|Alu	-3821	NM_001252442	208177	Mm.211477	NM_153412	ENSMUSG00000033149	Phldb2	AV253284|C820004H04Rik|LL5b|LL5beta	pleckstrin homology-like domain, family B, member 2	protein-coding
common_peak2-20206-10-6-0.549060422951165-1.21398586181642	chr1	177983800	177984192	+	0	NA	intron (NM_176916, intron 4 of 9)	intron (NM_176916, intron 4 of 9)	133536	NM_001290692	226720	Mm.11282	NM_001290692		Becn2	Gm104	beclin 2	protein-coding
common_peak2-24401-17-20--0.174021084573723-0.306598483909156	chr17	14943157	14943882	+	0	NA	Intergenic	L1Md_T|LINE|L1	-112250	NM_011581	21826	Mm.26688	NM_011581	ENSMUSG00000023885	Thbs2	TSP2|Thbs-2	thrombospondin 2	protein-coding
common_peak2-32315-45-95--0.724604475376284-2.26339654625139	chrX	60403965	60404856	+	0	NA	Intergenic	Intergenic	-624224	NR_045442	75545	Mm.391270	NR_045442	ENSMUSG00000085757	1700019B21Rik	-	RIKEN cDNA 1700019B21 gene	ncRNA
unique_peak1-3960-6-4-0.24347001549294-0.989110657569874	chr2	30783239	30783668	+	0	NA	Intergenic	Intergenic	-24636	NM_022415	64292	Mm.28768	NM_022415	ENSMUSG00000050737	Ptges	2410099E23Rik|D2Ertd369e|Pges|mPGES|mPGES-1	prostaglandin E synthase	protein-coding
common_peak1-18901-48-47-0.385964650513658-0.808188089851521	chr9	37656288	37658111	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-5206	NM_146417	258412	Mm.115804	NM_146417	ENSMUSG00000066749	Olfr877	MOR161-5	olfactory receptor 877	protein-coding
common_peak2-20956-56-63-0.235595825439243-0.527904843875901	chr11	17256985	17258370	+	0	NA	Intergenic	L1MB8|LINE|L1	100056	NM_020558	57316	Mm.287982	NM_020558	ENSMUSG00000000581	C1d	1110036E10Rik|AI875855|SUN-CoR	C1D nuclear receptor co-repressor	protein-coding
unique_peak1-602-9-2-1.60465090568306-1.87199725847353	chr10	20077278	20077790	+	0	NA	exon (NM_027930, exon 6 of 7)	exon (NM_027930, exon 6 of 7)	9909	NM_027930	71804	Mm.262151	NM_027930	ENSMUSG00000019992	Mtfr2	2610016C23Rik|4933412C16Rik|Dufd1|Fam54a	mitochondrial fission regulator 2	protein-coding
common_peak1-16759-36-33-0.391858244917415-0.703513783457792	chr6	34610232	34611221	+	0	NA	Intergenic	Intergenic	-48718	NM_145575	109624	Mm.308134	NM_145575	ENSMUSG00000029761	Cald1	4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik	caldesmon 1	protein-coding
unique_peak1-1387-9-2-1.60465090568306-1.87199725847353	chr12	56536611	56537091	+	0	NA	Intergenic	Intergenic	37039	NM_011968	26443	Mm.30210	NM_011968	ENSMUSG00000021024	Psma6	IOTA	proteasome (prosome, macropain) subunit, alpha type 6	protein-coding
common_peak1-12280-29-17-0.942365079172799-1.68242911687175	chr17	44710889	44711873	+	0	NA	intron (NR_073425, intron 5 of 5)	L1MEd|LINE|L1	161744	NR_073425	12393	Mm.391013	NM_009820	ENSMUSG00000039153	Runx2	AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a	runt related transcription factor 2	protein-coding
unique_peak1-4175-10-3-1.35641534500877-1.75805390616669	chr2	113457641	113458185	+	0	NA	intron (NM_001285459, intron 12 of 16)	intron (NM_001285459, intron 12 of 16)	-67334	NM_001287818	14260	Mm.4938	NM_010230	ENSMUSG00000044042	Fmn1	Fmn|ld	formin 1	protein-coding
unique_peak2-35810-3-10--1.87341470859657-1.75805390616669	chr18	61726982	61727559	+	0	NA	intron (NM_146087, intron 2 of 9)	intron (NM_146087, intron 2 of 9)	12034	NM_146087	93687	Mm.26908	NM_146087	ENSMUSG00000024576	Csnk1a1	2610208K14Rik|4632404G05Rik|5430427P18Rik|CK1a|Csnk1a	casein kinase 1, alpha 1	protein-coding
unique_peak2-37715-3-13--2.22133801201688-2.36932189928148	chr5	104399240	104399842	+	0	NA	intron (NM_198030, intron 3 of 6)	B2_Mm2|SINE|B2	6866	NM_198030	243168	Mm.284944	NM_198030	ENSMUSG00000034528	Hsd17b13	AI047820|PAN1B-like|Pan1b	hydroxysteroid (17-beta) dehydrogenase 13	protein-coding
unique_peak2-34522-5-8--0.874305337448166-1.10484139239135	chr14	54222914	54223364	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-62476	NM_001205242	100568452	Mm.213248	NM_001205242		A430107P09Rik	Va10	RIKEN cDNA A430107P09 gene	protein-coding
common_peak1-12062-15-35--1.15776025088666-1.87578206828671	chr17	23699517	23700181	+	0	NA	intron (NM_001033496, intron 1 of 5)	B1_Mus1|SINE|Alu	1344	NM_001033496	449521	Mm.268582	NM_001033496	ENSMUSG00000071256	Zfp213	BC038178|D17Ertd197e	zinc finger protein 213	protein-coding
common_peak2-21730-43-72--0.407261373356315-0.796654548817852	chr11	113750601	113752581	+	0	NA	intron (NM_172800, intron 4 of 44)	intron (NM_172800, intron 4 of 44)	-138462	NM_001163346	56699	Mm.293378	NM_020006	ENSMUSG00000041598	Cdc42ep4	1500041M20Rik|Borg4|CEP4	CDC42 effector protein (Rho GTPase binding) 4	protein-coding
common_peak2-30564-18-12-0.612479433087259-0.739965416525508	chr7	79301233	79302043	+	0	NA	intron (NM_001024703, intron 17 of 22)	intron (NM_001024703, intron 17 of 22)	149843	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding
unique_peak2-39120-8-17--1.16470258349474-1.02063122982878	chr8	83566615	83567226	+	0	NA	Intergenic	Intergenic	-28115	NM_027554	74841	Mm.246018	NM_027554	ENSMUSG00000038250	Usp38	4631402N15Rik|4833420O05Rik|AA536967|AU044701|AW544820|mKIAA1891	ubiquitin specific peptidase 38	protein-coding
common_peak1-12290-14-16--0.188246680892695-0.308035960714963	chr17	45784365	45785126	+	0	NA	intron (NM_001013767, intron 3 of 21)	IAPEz-int|LTR|ERVK	11513	NM_001013767	268958	Mm.426026	NM_001013767	ENSMUSG00000058626	Capn11	-	calpain 11	protein-coding
common_peak1-19496-56-100--0.422615657312551-1.07921547113662	chrX	160137602	160139021	+	0	NA	Intergenic	RSINE1|SINE|B4	60953	NM_028842	74264	Mm.39304	NM_028842	ENSMUSG00000083695	Rnf138rt1	-	ring finger protein 138, retrogene 1	protein-coding
unique_peak1-622-12-5-1.06381348436648-1.78669045979184	chr10	24478716	24479372	+	0	NA	Intergenic	Intergenic	-47136	NM_008813	18605	Mm.27254	NM_008813	ENSMUSG00000037370	Enpp1	4833416E15Rik|AI428932|C76301|CD203c|E-NPP1|Ly-41|M6S1|NPP1|Npps|PC-1|Pca|Pca-1|Pdnp1|ttw|twy	ectonucleotide pyrophosphatase/phosphodiesterase 1	protein-coding
common_peak2-29458-7-7--0.200909169701811-0.97990265578305	chr6	28790999	28791471	+	0	NA	intron (NM_019776, intron 16 of 23)	intron (NM_019776, intron 16 of 23)	-9488	NM_138682	192198	Mm.443660	NM_138682	ENSMUSG00000049939	Lrrc4	MBAG1|NGL-2|NLG-2|Nag14	leucine rich repeat containing 4	protein-coding
common_peak2-25763-65-18-2.24423842603354-11.6792348761821	chr19	31082575	31083585	+	0	NA	intron (NM_001013833, intron 3 of 17)	intron (NM_001013833, intron 3 of 17)	-74251	NM_031249	83410	Mm.22031	NM_031249	ENSMUSG00000053536	Cstf2t	64kDa|C77975|tCstF-64|tauCstF-64	cleavage stimulation factor, 3' pre-RNA subunit 2, tau	protein-coding
common_peak2-29146-18-13-0.505564229170747-0.625923329873571	chr5	126538060	126538781	+	0	NA	Intergenic	Intergenic	525632	NM_001190352	208151	Mm.40397	NM_001190352	ENSMUSG00000070498	Tmem132b	AK220418|mKIAA1786	transmembrane protein 132B	protein-coding
unique_peak2-34103-1-7--2.62705701021674-1.80617997398389	chr13	14521855	14522256	+	0	NA	intron (NM_001081348, intron 2 of 28)	intron (NM_001081348, intron 2 of 28)	93438	NM_001081348	94253	Mm.125298	NM_153130	ENSMUSG00000021301	Hecw1	9330116H24Rik|AV273951|E130207I19Rik|Nedl1	HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	protein-coding
common_peak2-25691-12-7-0.648775985087639-0.697979855752659	chr19	16259052	16259453	+	0	NA	intron (NM_008139, intron 1 of 6)	intron (NM_008139, intron 1 of 6)	20664	NR_033228	595139	Mm.405662	NR_033228		E030024N20Rik	9030417F11Rik|Ppia-ps8	peptidylprolyl isomerase A pseudogene 8	pseudo
common_peak2-28051-25-40--0.495702099272978-0.683454027796267	chr4	59188943	59190195	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-12853	NM_011673	22234	Mm.198803	NM_011673	ENSMUSG00000028381	Ugcg	AU043821|C80537|Epcs21|GlcT-1|Ugcgl	UDP-glucose ceramide glucosyltransferase	protein-coding
common_peak2-30861-8-8--0.164702583494742-1.00793137938329	chr7	139272872	139273381	+	0	NA	intron (NM_018867, intron 4 of 13)	intron (NM_018867, intron 4 of 13)	73298	NM_018867	55987	Mm.471654	NM_018867	ENSMUSG00000030862	Cpxm2	4632435C11Rik|CPX-2|Cpx2	carboxypeptidase X 2 (M14 family)	protein-coding
unique_peak2-37448-4-17--2.19338551529556-2.18192634393779	chr4	155769942	155770397	+	0	NA	Intergenic	Intergenic	-161203	NM_198305	231003	Mm.423038	NM_198305	ENSMUSG00000078484	Klhl17	AL022703|BC058738	kelch-like 17	protein-coding
common_peak1-18888-10-12--0.344024373132323-0.340565874754526	chr9	35098562	35099026	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	10104	NR_040715	71133	Mm.158577	NR_040715		4933422A05Rik	-	RIKEN cDNA 4933422A05 gene	ncRNA
common_peak2-24370-15-46--1.54242410112198-3.58938495778629	chr17	6960734	6961791	+	0	NA	intron (NM_009510, intron 2 of 12)	intron (NM_009510, intron 2 of 12)	25867	NM_009510	22350	Mm.277812	NM_009510	ENSMUSG00000052397	Ezr	AW146364|R75297|Vil2|p81	ezrin	protein-coding
unique_peak2-36957-4-7--1.02346051385325-1.09384600808989	chr3	108591755	108592324	+	0	NA	Intergenic	ORR1E|LTR|MaLR	49463	NM_177859	329738	Mm.72322	NM_177859	ENSMUSG00000049565	Aknad1	4921525H12Rik	AKNA domain containing 1	protein-coding
common_peak2-23796-27-13-1.18419102883763-2.09887956687855	chr15	99835160	99835761	+	0	NA	intron (NM_001284521, intron 12 of 15)	intron (NM_001284521, intron 12 of 15)	-31742	NR_028124	70281	Mm.484037	NR_028124		2310068J16Rik	-	RIKEN cDNA 2310068J16 gene	ncRNA
unique_peak2-35000-7-7--0.200909169701811-0.97990265578305	chr15	99811549	99811941	+	0	NA	intron (NM_001284521, intron 1 of 15)	intron (NM_001284521, intron 1 of 15)	-8027	NR_028124	70281	Mm.484037	NR_028124		2310068J16Rik	-	RIKEN cDNA 2310068J16 gene	ncRNA
unique_peak2-35993-6-8--0.60452689106201-1.03789460276074	chr19	32211166	32211508	+	0	NA	intron (NM_144792, intron 7 of 9)	intron (NM_144792, intron 7 of 9)	-33707	NM_018830	54447	Mm.491229	NM_018830	ENSMUSG00000024887	Asah2	AI585898	N-acylsphingosine amidohydrolase 2	protein-coding
common_peak2-24389-87-70-0.845889986276487-4.04500038127425	chr17	13307977	13309885	+	0	NA	intron (NM_199252, intron 8 of 9)	intron (NM_199252, intron 8 of 9)	15726	NM_199252	381058	Mm.390935	NM_199252	ENSMUSG00000067049	Unc93a	Unc93l|unc-93A	unc-93 homolog A (C. elegans)	protein-coding
common_peak1-18164-20-24--0.155781405183531-0.319918318021793	chr8	13594788	13595729	+	0	NA	intron (NM_009025, intron 7 of 23)	intron (NM_009025, intron 7 of 23)	-32797	NM_001080781	66501	Mm.46136	NM_025601	ENSMUSG00000031452	1700029H14Rik	-	RIKEN cDNA 1700029H14 gene	protein-coding
common_peak1-10025-42-30-0.788133017480309-1.81099027427053	chr13	9493964	9495530	+	0	NA	intron (NM_001081426, intron 2 of 36)	intron (NM_001081426, intron 2 of 36)	218976	NM_001081426	208440	Mm.217326	NM_172459	ENSMUSG00000048264	Dip2c	2900024P20Rik|9630044M06|mKIAA0934	DIP2 disco-interacting protein 2 homolog C (Drosophila)	protein-coding
common_peak2-23131-9-12--0.510826311736872-0.394412252720706	chr14	101794400	101794980	+	0	NA	Intergenic	Intergenic	-195404	NM_029680	76627	Mm.31415	NM_029680	ENSMUSG00000042888	Prr30	1700110M21Rik	proline rich 30	protein-coding
common_peak2-26443-58-41-0.903632512111736-2.95955828708081	chr2	70661389	70662153	+	0	NA	intron (NM_172664, intron 1 of 19)	L2a|LINE|L2	1766	NM_172664	228012	Mm.136511	NM_172664	ENSMUSG00000041997	Tlk1	4930545J15Rik	tousled-like kinase 1	protein-coding
unique_peak2-36746-4-12--1.72390023199434-1.85743853830261	chr3	58690508	58691226	+	0	NA	Intergenic	Intergenic	-1733	NM_153385	229320	Mm.131502	NM_153384	ENSMUSG00000043850	Clrn1	A130002D11Rik|USH3|Ush3a	clarin 1	protein-coding
unique_peak1-3068-11-3-1.50869358425161-1.95434855131066	chr18	11351906	11352647	+	0	NA	Intergenic	Intergenic	-299711	NR_105023	68434	Mm.57626	NR_105022	ENSMUSG00000097222	1010001N08Rik	-	RIKEN cDNA 1010001N08 gene	ncRNA
common_peak1-14193-12-10-0.189344366450341-0.386243247519795	chr2	148014780	148015381	+	0	NA	Intergenic	L1ME3|LINE|L1	-142375	NM_010446	15376	Mm.938	NM_010446	ENSMUSG00000037025	Foxa2	HNF3-beta|HNF3beta|Hnf-3b|Hnf3b|Tcf-3b|Tcf3b	forkhead box A2	protein-coding
common_peak1-18656-13-10-0.319040412000471-0.446472590016315	chr8	113523257	113523797	+	0	NA	Intergenic	RLTR23|LTR|ERV1	-1804	NM_007916	13680	Mm.287901	NM_007916	ENSMUSG00000015023	Ddx19a	DBP5|Ddx19|Eif4a-rs1	DEAD (Asp-Glu-Ala-Asp) box polypeptide 19a	protein-coding
common_peak2-29732-11-9-0.186765489364251-0.344532117358383	chr6	85332508	85332917	+	0	NA	Intergenic	RLTR18B|LTR|ERVK	-8084	NM_001003955	52055	Mm.220334	NM_177466	ENSMUSG00000051343	Rab11fip5	9130206P09Rik|C75969|D6Ertd32e|GAF1|RIP11	RAB11 family interacting protein 5 (class I)	protein-coding
common_peak2-20323-37-37-0.278065558042234-0.513362016391488	chr10	82082818	82083919	+	0	NA	intron (NM_001135567, intron 2 of 2)	intron (NM_001135567, intron 2 of 2)	2605	NM_001135569	544717	Mm.334867	NM_001135567	ENSMUSG00000063320	1190007I07Rik	-	RIKEN cDNA 1190007I07 gene	protein-coding
unique_peak2-32882-5-7--0.704380336005853-1.01466476204226	chr10	12698888	12699376	+	0	NA	Intergenic	Intergenic	-15067	NM_001163591	74732	Mm.248648	NM_029075	ENSMUSG00000039232	Stx11	5830405C08Rik	syntaxin 11	protein-coding
common_peak2-26486-108-178--0.113638815856187-0.408046540016924	chr2	80580121	80581725	+	0	NA	Intergenic	Intergenic	101502	NM_001190179	69482	Mm.29200	NM_027091		Nup35	2310006I24Rik|35kDa|5330402E05Rik|MP44|NO44	nucleoporin 35	protein-coding
common_peak1-8249-8-12--0.695217300193522-0.475924844171029	chr10	18876497	18877010	+	0	NA	intron (NR_038021, intron 1 of 3)	intron (NR_038021, intron 1 of 3)	-10291	NR_038022	100504265	Mm.383417	NR_038021		Gm20139	-	predicted gene, 20139	ncRNA
common_peak2-23305-13-8-0.608547029195456-0.660903317613904	chr15	36345727	36346227	+	0	NA	Intergenic	ID4|SINE|ID	80569	NM_175134	68839	Mm.396537	NM_175134	ENSMUSG00000048307	Ankrd46	1110054N06Rik|AI314978|AI987733	ankyrin repeat domain 46	protein-coding
unique_peak2-36026-6-7--0.434601889619698-0.97990265578305	chr19	42720398	42720762	+	0	NA	Intergenic	Lx|LINE|L1	-33284	NM_053083	67573	Mm.178767	NM_053083	ENSMUSG00000025185	Loxl4	4833426I20Rik|Loxc	lysyl oxidase-like 4	protein-coding
unique_peak1-6666-11-2-1.92373108353046-2.32232533660526	chr8	18739156	18739779	+	0	NA	intron (NM_007426, intron 1 of 8)	intron (NM_007426, intron 1 of 8)	2095	NM_007426	11601	Mm.439874	NM_007426	ENSMUSG00000031465	Angpt2	Agpt2|Ang-2|Ang2	angiopoietin 2	protein-coding
unique_peak1-1019-23-9-1.39983940962172-2.17218792383888	chr11	75213327	75214462	+	0	NA	exon (NM_001102611, exon 7 of 11)	exon (NM_001102611, exon 7 of 11)	22231	NM_011340	20317	Mm.2044	NM_011340	ENSMUSG00000000753	Serpinf1	AI195227|EPC-1|Pedf|Pedfl|Sdf3	serine (or cysteine) peptidase inhibitor, clade F, member 1	protein-coding
common_peak1-14892-25-20-0.469532482566345-0.662033714151238	chr3	96196796	96197731	+	0	NA	Intergenic	(CAAAA)n|Simple_repeat|Simple_repeat	21493	NR_001579	21748		NR_001579	ENSMUSG00000064796	Terc	mTER|mTR	telomerase RNA component	ncRNA
common_peak2-25590-23-19-0.399839409621718-0.538442145997695	chr19	8701582	8702614	+	0	NA	3' UTR (NM_008766, exon 10 of 10)	3' UTR (NM_008766, exon 10 of 10)	9612	NM_008766	18399	Mm.30090	NM_008766	ENSMUSG00000024650	Slc22a6	NKT|Oat1|Orctl1|mOat1	solute carrier family 22 (organic anion transporter), member 6	protein-coding
common_peak1-9099-10-8-0.186490343566457-1.078512453669	chr11	70540142	70540605	+	0	NA	intron (NM_153103, intron 22 of 22)	intron (NM_153103, intron 22 of 22)	20881	NR_105890	102465557		NR_105890		Mir6925	mmu-mir-6925	microRNA mir-6925	ncRNA
common_peak1-10236-11-7-0.508693584251613-1.21681515183528	chr13	52929148	52929677	+	0	NA	Intergenic	Intergenic	-76838	NR_027893	105404	Mm.184173	NR_027893		BB123696	-	expressed sequence BB123696	ncRNA
common_peak1-9254-92-116-0.22198736411936-0.646070914710201	chr11	86756924	86758847	+	0	NA	intron (NM_001005341, intron 4 of 4)	intron (NM_001005341, intron 4 of 4)	49379	NM_001005341	77864	Mm.191894	NM_001005341	ENSMUSG00000018427	Ypel2	6430570G24|E130113K08Rik	yippee-like 2 (Drosophila)	protein-coding
common_peak1-11893-12-15--0.351224014912361-0.332077462497413	chr17	17825778	17826220	+	0	NA	Intergenic	Intergenic	-14906	NM_001104539	626942	Mm.404019	NM_001104539	ENSMUSG00000092120	Vmn2r90	EG626942	vomeronasal 2, receptor 90	protein-coding
unique_peak1-7092-6-5--0.0195643903408542-0.947717972411649	chr9	35559504	35559955	+	0	NA	Intergenic	L1Md_F3|LINE|L1	11095	NM_001167588	100312949	Mm.475848	NM_001167588	ENSMUSG00000091174	Gm17677	Pate-n	predicted gene, 17677	protein-coding
common_peak1-13034-18-8-1.14299414978604-1.45476480588849	chr19	5601731	5602554	+	0	NA	TTS (NM_178637)	TTS (NM_178637)	269	NM_026616	68209	Mm.246200	NM_026616		Rnaseh2c	1500026D16Rik|AYP1	ribonuclease H2, subunit C	protein-coding
common_peak1-11439-29-29-0.205399485006592-0.423354874519384	chr15	100468488	100469570	+	0	NA	Intergenic	Intergenic	-1658	NM_001033872	207818	Mm.26282	NM_174992	ENSMUSG00000053559	Smagp	-	small cell adhesion glycoprotein	protein-coding
common_peak2-29101-17-17-0.0483713367627256-0.325169893479371	chr5	122526837	122527651	+	0	NA	Intergenic	RMER20B|LTR|ERVK	-23745	NM_010861	17906	Mm.1529	NM_010861	ENSMUSG00000013936	Myl2	MLC-2|MLC-2v|Mlc2v|Mylpc	myosin, light polypeptide 2, regulatory, cardiac, slow	protein-coding
unique_peak2-36434-8-13--0.802132504110034-0.562038191119711	chr2	131186754	131187552	+	0	NA	Intergenic	ORR1A4-int|LTR|MaLR	-8525	NM_178607	51902	Mm.477523	NM_178607	ENSMUSG00000048911	Rnf24	2810473M14Rik|4930505A13Rik|AI317164|C86507|D2Ertd504e	ring finger protein 24	protein-coding
common_peak2-25311-14-13-0.0918612383000403-0.332077462497413	chr18	75300147	75300843	+	0	NA	intron (NM_027727, intron 13 of 16)	intron (NM_027727, intron 13 of 16)	122069	NM_027727	69190	Mm.173826	NM_027727	ENSMUSG00000035765	Dym	1810041M12Rik|4933427L07Rik|C030019K18Rik	dymeclin	protein-coding
common_peak2-21218-11-8-0.338768582809301-1.14218153353838	chr11	62087921	62088371	+	0	NA	intron (NM_027198, intron 2 of 4)	intron (NM_027198, intron 2 of 4)	6751	NM_027198	69747	Mm.141150	NM_027198	ENSMUSG00000014243	Zswim7	2410012H22Rik	zinc finger SWIM-type containing 7	protein-coding
unique_peak1-3514-21-7-1.56948926526624-2.44150343356329	chr19	16327103	16328211	+	0	NA	intron (NM_008139, intron 2 of 6)	intron (NM_008139, intron 2 of 6)	61837	NR_105832	102465218		NR_105832	miRBase:MI0021942	Mir496b	mmu-mir-496b	microRNA mir-496b	ncRNA
unique_peak1-6469-9-3-1.18961340640422-1.57096726280955	chr7	108037695	108038308	+	0	NA	intron (NM_001081116, intron 2 of 20)	intron (NM_001081116, intron 2 of 20)	-7078	NR_037289	100526508		NR_037289		Mir3102	mmu-mir-3102	microRNA 3102	ncRNA
common_peak1-15324-13-15--0.221527969362231-0.308519316180257	chr4	46195719	46196364	+	0	NA	exon (NM_011728, exon 5 of 6)	exon (NM_011728, exon 5 of 6)	13142	NM_011728	22590	Mm.247036	NM_011728	ENSMUSG00000028329	Xpa	AI573865|Xpac	xeroderma pigmentosum, complementation group A	protein-coding
common_peak2-28227-13-8-0.608547029195456-0.660903317613904	chr4	119126909	119127274	+	0	NA	TTS (NM_001014900)	TTS (NM_001014900)	31802	NM_001014900	332934	Mm.388911	NM_001014900	ENSMUSG00000070806	Zmynd12	AI414736	zinc finger, MYND domain containing 12	protein-coding
common_peak2-29851-17-53--1.53659116395843-3.93018944736487	chr6	99027700	99029017	+	0	NA	intron (NM_053202, intron 4 of 18)	B3A|SINE|B2	-50066	NM_001197322	108655	Mm.234965	NM_053202	ENSMUSG00000030067	Foxp1	3110052D19Rik|4932443N09Rik|AI461938|AW494214	forkhead box P1	protein-coding
common_peak1-15890-51-38-0.789521606740324-2.06309159043266	chr5	13399078	13400446	+	0	NA	5' UTR (NM_009152, exon 1 of 17)	5' UTR (NM_009152, exon 1 of 17)	453	NM_009152	20346	Mm.372039	NM_009152	ENSMUSG00000028883	Sema3a	Hsema-I|SEMA1|SemD|Semad|coll-1	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A	protein-coding
unique_peak1-2110-8-4-0.683294323060208-1.21878474469819	chr15	40380566	40381010	+	0	NA	Intergenic	Intergenic	-21965	NR_046185	432945	Mm.321981	NR_046185	ENSMUSG00000056332	Gm16294	EG432945|OTTMUSG00000033304	predicted gene 16294	ncRNA
common_peak2-20559-11-17--0.661231417190699-0.58239619684445	chr10	71347624	71348569	+	0	NA	Intergenic	RMER20B|LTR|ERVK	95342	NR_003644	108950	Mm.212793	NM_175390	ENSMUSG00000043859	1700049L16Rik	-	hematological and neurological expressed 1-like pseudogene	pseudo
unique_peak2-32889-4-14--1.93035110946177-2.23384849113406	chr10	13868424	13869088	+	0	NA	exon (NM_010437, exon 9 of 9)	exon (NM_010437, exon 9 of 9)	182571	NM_010437	15273	Mm.42157	NM_010437	ENSMUSG00000015501	Hivep2	MIBP1|Schnurri-2|Shn-2	human immunodeficiency virus type I enhancer binding protein 2	protein-coding
unique_peak2-37011-5-6--0.511735258063458-0.947717972411649	chr3	122498481	122498937	+	0	NA	intron (NM_153422, intron 9 of 20)	intron (NM_153422, intron 9 of 20)	6189	NR_045168	71647	Mm.449992	NR_045168		4930447N08Rik	-	RIKEN cDNA 4930447N08 gene	ncRNA
unique_peak1-4268-7-0-2.79909083029819-2.40823996531185	chr2	131863433	131863921	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-7953	NM_175445	215653	Mm.204737	NM_175445	ENSMUSG00000027339	Rassf2	3830431H01Rik|9030412M04Rik|AI852669|AW495050	Ras association (RalGDS/AF-6) domain family member 2	protein-coding
common_peak2-19627-3-5--0.998945590680433-0.96108193396963	chr1	37997683	37998013	+	0	NA	Intergenic	Lx2B|LINE|L1	16756	NM_027111	69541	Mm.389117	NM_027111	ENSMUSG00000026085	Lyg1	2300002O18Rik	lysozyme G-like 1	protein-coding
common_peak2-20309-28-41--0.339358302957298-0.489200556185773	chr10	59899087	59900809	+	0	NA	intron (NR_045556, intron 15 of 68)	intron (NR_045556, intron 15 of 68)	37474	NM_001164374	100302688	Mm.444135	NM_001164374	ENSMUSG00000090439	Gm17455	-	predicted gene, 17455	protein-coding
unique_peak2-34365-10-12--0.344024373132323-0.340565874754526	chr13	107837476	107838178	+	0	NA	Intergenic	MLT2D|LTR|ERVL	25177	NR_015471	100040322	Mm.133867	NR_015471		3830408C21Rik	-	RIKEN cDNA 3830408C21 gene	ncRNA
unique_peak1-1050-7-0-2.79909083029819-2.40823996531185	chr11	79097011	79097399	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-29008	NM_019653	78889	Mm.307022	NM_019653	ENSMUSG00000017677	Wsb1	1110056B13Rik|2700038M07Rik	WD repeat and SOCS box-containing 1	protein-coding
common_peak1-15128-11-6-0.701338662194009-1.32595962126035	chr3	138814869	138815423	+	0	NA	Intergenic	RMER1A|Other|Other	-53711	NM_198659	381476	Mm.188334	NM_198659	ENSMUSG00000047940	Stpg2	B930007M17Rik|Gm1017	sperm tail PG rich repeat containing 2	protein-coding
common_peak1-12538-27-31--0.00845404910476422-0.304476922018591	chr18	4375373	4376555	+	0	NA	intron (NM_026157, intron 1 of 8)	intron (NM_026157, intron 1 of 8)	374	NM_026157	67440	Mm.49826	NM_026157	ENSMUSG00000024234	Mtpap	0610027A18Rik|AW551379|Papd1	mitochondrial poly(A) polymerase	protein-coding
common_peak1-14934-9-8-0.0196884049619079-1.03275496310833	chr3	102366271	102366772	+	0	NA	Intergenic	HERV16-int|LTR|ERVL	92679	NM_013609	18049	Mm.1259	NM_013609	ENSMUSG00000027859	Ngf	Ngfb	nerve growth factor	protein-coding
common_peak1-14667-19-40--0.954864677956397-1.60774463804084	chr3	59203972	59204907	+	0	NA	Intergenic	L1Md_T|LINE|L1	-56261	NM_001162884	242050	Mm.228086	NM_001162884	ENSMUSG00000036334	Igsf10	6530405F15Rik|9030224D03|AA409708|AA536958|AI414626|Adlican2|CMF608	immunoglobulin superfamily, member 10	protein-coding
unique_peak2-38790-3-7--1.41398308995928-1.23214870625617	chr7	129877112	129877481	+	0	NA	intron (NM_019430, intron 1 of 3)	intron (NM_019430, intron 1 of 3)	62038	NM_019430	54376	Mm.444212	NM_019430		Cacng3	-	calcium channel, voltage-dependent, gamma subunit 3	protein-coding
unique_peak1-6988-9-2-1.60465090568306-1.87199725847353	chr8	120490789	120491299	+	0	NA	Intergenic	Intergenic	-165215	NM_026758	68533	Mm.181836	NM_026758	ENSMUSG00000031843	Mphosph6	1110001M01Rik|AA536809|C86426	M phase phosphoprotein 6	protein-coding
common_peak1-9778-88-62-1.03813248567062-5.51474340066327	chr12	56532618	56535241	+	0	NA	Intergenic	Intergenic	34117	NM_011968	26443	Mm.30210	NM_011968	ENSMUSG00000021024	Psma6	IOTA	proteasome (prosome, macropain) subunit, alpha type 6	protein-coding
unique_peak1-5190-9-0-3.18961340640422-3.01029995663981	chr5	32193709	32194166	+	0	NA	intron (NM_181281, intron 5 of 10)	intron (NM_181281, intron 5 of 10)	193514	NM_181282	107976	Mm.482126	NM_144541	ENSMUSG00000052139	Bre	6030405P19Rik|AI429776|B830038C02Rik	brain and reproductive organ-expressed protein	protein-coding
unique_peak1-3584-15-5-1.4272022498345-1.61682445937017	chr19	29500882	29501537	+	0	NA	intron (NM_021396, intron 2 of 5)	intron (NM_021396, intron 2 of 5)	15800	NM_021396	58205	Mm.116737	NM_021396		Pdcd1lg2	B7-DC|Btdc|F730015O22Rik|PD-L2	programmed cell death 1 ligand 2	protein-coding
common_peak1-12427-10-8-0.186490343566457-1.078512453669	chr17	75277843	75278433	+	0	NA	Intergenic	Intergenic	-126731	NM_019919	268977	Mm.269747	NM_019919	ENSMUSG00000001870	Ltbp1	9430031G15Rik|9830146M04|Ltbp-1|Tgfb|b2b1000Clo	latent transforming growth factor beta binding protein 1	protein-coding
common_peak1-11537-21-7-1.56948926526624-2.44150343356329	chr16	4726290	4727056	+	0	NA	intron (NM_001136066, intron 1 of 5)	CpG	312	NM_001136066	15369	Mm.272866	NM_010443	ENSMUSG00000004070	Hmox2	HO-2|HO2	heme oxygenase (decycling) 2	protein-coding
unique_peak1-4748-10-0-3.35641534500877-3.31132995230379	chr3	112478650	112478977	+	0	NA	Intergenic	Intergenic	480832	NM_001190404	545562	Mm.462977	NM_001190403		Amy2b	Amy-X|Amy2-2|OTTMUSG00000022462|mAmy2-1	amylase 2b	protein-coding
unique_peak2-37083-3-5--0.998945590680433-0.96108193396963	chr3	151323871	151324266	+	0	NA	Intergenic	L1Md_F2|LINE|L1	88855	NM_133871	99899	Mm.30756	NM_133871	ENSMUSG00000028037	Ifi44	A430056A10Rik|AW261460|MTAP44|p44	interferon-induced protein 44	protein-coding
common_peak2-21684-18-23--0.272043349492805-0.34651636097721	chr11	104318696	104319729	+	0	NA	Intergenic	Intergenic	-15607	NM_001081045	76719	Mm.136418	NM_001081045	ENSMUSG00000018412	Kansl1	1700081L11Rik|9430041J06Rik|mKIAA1267	KAT8 regulatory NSL complex subunit 1	protein-coding
unique_peak1-834-11-6-0.701338662194009-1.32595962126035	chr11	8684270	8684827	+	0	NA	Intergenic	Intergenic	-120010	NM_001083587	319939	Mm.337820	NM_001083587	ENSMUSG00000020422	Tns3	BC023928|F830010I22Rik|TEM6|Tens1	tensin 3	protein-coding
unique_peak1-5621-11-5-0.923731083530457-1.477227296591	chr6	5582650	5583204	+	0	NA	Intergenic	Intergenic	-92712	NM_001191023	13426	Mm.20893	NM_010063	ENSMUSG00000029757	Dync1i1	DH IC-1|DHIC-1|DIC|Dncic1|IC74	dynein cytoplasmic 1 intermediate chain 1	protein-coding
common_peak2-32398-13-18--0.469455482805817-0.409888142029227	chrX	140542415	140543051	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-45505	NR_040271	319764	Mm.208482	NR_040271	ENSMUSG00000085139	A730046J19Rik	-	RIKEN cDNA A730046J19 gene	ncRNA
unique_peak1-2056-10-4-1.03448725012141-1.5150158574804	chr15	27525870	27526372	+	0	NA	Intergenic	Intergenic	24872	NR_106065	102466808		NR_106065		Mir7117	mmu-mir-7117	microRNA mir-7117	ncRNA
common_peak1-12924-58-24-1.65209374511577-7.02249541744472	chr19	3832626	3834575	+	0	NA	Intergenic	Intergenic	-18173	NM_001271496	12660	Mm.225505	NM_013490	ENSMUSG00000024843	Chka	CK|CK/EK-alpha|Chetk-alpha|Chk|ChoK|EK|EtnK-alpha	choline kinase alpha	protein-coding
unique_peak1-4517-8-6-0.197867495889966-1.03789460276074	chr3	27616553	27617033	+	0	NA	Intergenic	Intergenic	-7432	NM_173182	72007	Mm.38832	NM_173182	ENSMUSG00000039286	Fndc3b	1600019O04Rik|AW550168|Fad104|mKIAA4164	fibronectin type III domain containing 3B	protein-coding
common_peak1-9731-21-11-0.984526764545079-1.3750876294627	chr12	40016615	40017387	+	0	NA	Intergenic	Lx8|LINE|L1	506703	NM_001163154	14009	Mm.4866	NM_007960	ENSMUSG00000004151	Etv1	ER81|Etsrp81	ets variant 1	protein-coding
common_peak2-22401-6-11--1.01956439034085-1.32595962126035	chr13	33051485	33051913	+	0	NA	Intergenic	Intergenic	-5683	NM_011454	20708	Mm.36526	NM_011454	ENSMUSG00000042842	Serpinb6b	NK13|Spi12|ovalbumin	serine (or cysteine) peptidase inhibitor, clade B, member 6b	protein-coding
unique_peak2-34456-7-6--0.00826409175941478-0.97990265578305	chr14	25767993	25768414	+	0	NA	Intergenic	Intergenic	194524	NR_045718	75862	Mm.109191	NR_045718		4930572O13Rik	-	RIKEN cDNA 4930572O13 gene	ncRNA
unique_peak2-35658-1-4--1.94898510510411-1.10720996964787	chr18	5160023	5160420	+	0	NA	Intergenic	Intergenic	113634	NM_153153	225115	Mm.136791	NM_153153	ENSMUSG00000024236	Svil	AU024053|B430302E16Rik	supervillin	protein-coding
common_peak2-26670-16-33--0.969199198982277-1.43262124146305	chr2	122348528	122349233	+	0	NA	intron (NM_001085518, intron 14 of 17)	intron (NM_001085518, intron 14 of 17)	38203	NM_001085518	381417	Mm.482295	NM_001085518	ENSMUSG00000079071	Gm14085	OTTMUSG00000015615	predicted gene 14085	protein-coding
common_peak2-25912-40-51--0.0414640353899935-0.301029995663982	chr19	46337992	46338913	+	0	NA	intron (NM_178930, intron 13 of 39)	intron (NM_178930, intron 13 of 39)	-40775	NM_001177369	18034	Mm.102365	NM_019408	ENSMUSG00000025225	Nfkb2	NF-kappaB2|lyt|p49|p49/p100|p50B|p52	nuclear factor of kappa light polypeptide gene enhancer in B cells 2, p49/p100	protein-coding
unique_peak1-1356-10-3-1.35641534500877-1.75805390616669	chr12	24463217	24463960	+	0	NA	Intergenic	L1_Mur2|LINE|L1	318546	NM_001256489	66808	Mm.379124	NM_001256489		9030624G23Rik	-	RIKEN cDNA 9030624G23 gene	protein-coding
common_peak1-12612-12-10-0.189344366450341-0.386243247519795	chr18	31634333	31634933	+	0	NA	Intergenic	Intergenic	-27564	NM_009308	20983	Mm.233846	NM_009308	ENSMUSG00000024261	Syt4	SytIV	synaptotagmin IV	protein-coding
unique_peak2-32808-5-6--0.511735258063458-0.947717972411649	chr1	184050633	184051128	+	0	NA	Intergenic	Intergenic	-3988	NM_012058	27058	Mm.303071	NM_012058	ENSMUSG00000026511	Srp9	9kDa	signal recognition particle 9	protein-coding
unique_peak1-7044-8-3-1.00522241794757-1.39487600375387	chr8	128356761	128357271	+	0	NA	intron (NM_175561, intron 17 of 33)	intron (NM_175561, intron 17 of 33)	65201	NM_175561	270109	Mm.145535	NM_175561	ENSMUSG00000060212	Pcnxl2	A830048P05|AU067631|E330039K12Rik|mKIAA0435	pecanex-like 2 (Drosophila)	protein-coding
common_peak1-16344-62-64-0.38838364577363-0.945872376852013	chr5	118464595	118466816	+	0	NA	Intergenic	Intergenic	-12128	NM_021344	57816	Mm.273285	NM_021344	ENSMUSG00000029359	Tesc	1010001A17Rik|2410011K10Rik|TE-1	tescalcin	protein-coding
unique_peak2-38630-0-8--4.01005593191652-2.05605744720049	chr7	81212866	81213186	+	0	NA	Intergenic	RMER1B|Other|Other	-54458	NM_009181	20450	Mm.4954	NM_009181	ENSMUSG00000025789	St8sia2	AI323367|ST8SiaII|STX|Siat8b	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2	protein-coding
common_peak1-12584-10-11--0.228547155712387-0.31137425193576	chr18	14782660	14783025	+	0	NA	Intergenic	Intergenic	58581	NM_001161369	268996	Mm.31761	NM_009280	ENSMUSG00000037013	Ss18	D130059H17|Ssxt|Syt	synovial sarcoma translocation, Chromosome 18	protein-coding
common_peak1-13605-42-18-1.4944018144236-4.39141806271911	chr2	19371170	19372313	+	0	NA	Intergenic	Intergenic	4451	NM_018809	19213	Mm.69647	NM_018809	ENSMUSG00000026735	Ptf1a	PTF1-p48|PTF1p48|bHLHa29	pancreas specific transcription factor, 1a	protein-coding
common_peak2-29576-38-57--0.286528335829042-0.468749305398727	chr6	47920212	47921687	+	0	NA	Intergenic	Intergenic	17560	NM_178898	101197	Mm.241063	NM_178898	ENSMUSG00000045466	Zfp956	AI894139	zinc finger protein 956	protein-coding
common_peak2-25045-19-20-0.0103699038829257-0.306326795069978	chr18	32036439	32037355	+	0	NA	intron (NM_028866, intron 7 of 21)	intron (NM_028866, intron 7 of 21)	34660	NM_026006	67158	Mm.31537	NM_026006	ENSMUSG00000044982	Sft2d3	2610206C24Rik|AI847965|AW046173	SFT2 domain containing 3	protein-coding
unique_peak2-33405-5-7--0.704380336005853-1.01466476204226	chr11	54803411	54803743	+	0	NA	intron (NM_013472, intron 20 of 25)	intron (NM_013472, intron 20 of 25)	-27135	NM_001271455	57783	Mm.259671	NM_021327	ENSMUSG00000020400	Tnip1	ABIN|ABIN-1|ABIN1|AU018810|Naf1|Nef|VAN	TNFAIP3 interacting protein 1	protein-coding
unique_peak1-6383-12-8-0.478850983645327-0.562038191119709	chr7	73584900	73585650	+	0	NA	Intergenic	Intergenic	-12912	NM_053080	56847	Mm.140988	NM_053080	ENSMUSG00000015134	Aldh1a3	ALDH6|RALDH3|V1	aldehyde dehydrogenase family 1, subfamily A3	protein-coding
unique_peak2-38707-6-20--1.82691931239846-2.0280102512677	chr7	110122560	110123485	+	0	NA	promoter-TSS (NM_147109)	promoter-TSS (NM_147109)	-518	NM_147109	259113	Mm.377854	NM_147109	ENSMUSG00000043354	Olfr577	MOR7-2	olfactory receptor 577	protein-coding
common_peak2-29169-25-32--0.182544214013348-0.333081040816759	chr5	134313835	134314885	+	0	NA	Intergenic	Intergenic	-261258	NM_030719	80909	Mm.45218	NM_030719		Gatsl2	7530428J21Rik|AW742413|Gats|Gatsl1	GATS protein-like 2	protein-coding
common_peak2-19929-12-8-0.478850983645327-0.562038191119709	chr1	127239862	127240414	+	0	NA	Intergenic	Intergenic	92166	NM_023735	74117	Mm.183102	NM_023735	ENSMUSG00000026341	Actr3	1200003A09Rik|Arp3	ARP3 actin-related protein 3	protein-coding
common_peak1-19281-88-162--0.333315745060545-1.11540392349276	chr9	119321579	119322879	+	0	NA	intron (NM_007397, intron 1 of 9)	MurERV4-int|LTR|ERVK	10610	NM_007397	11481	Mm.390239	NM_007397	ENSMUSG00000061393	Acvr2b	ActRIIB	activin receptor IIB	protein-coding
common_peak1-17314-36-32-0.434926966809301-0.779916249636873	chr6	142387162	142388112	+	0	NA	intron (NM_145572, intron 12 of 16)	L1Md_F2|LINE|L1	25686	NM_001242345	319552	Mm.39649	NM_001242345	ENSMUSG00000071112	B230216G23Rik	Npq|Spx	RIKEN cDNA B230216G23 gene	protein-coding
unique_peak1-4361-22-8-1.47735910364509-2.29727994934156	chr2	156417040	156417875	+	0	NA	Intergenic	Intergenic	21701	NR_040372	100504350	Mm.94426	NR_040372	ENSMUSG00000086118	Gm14169	OTTMUSG00000015869	predicted gene 14169	ncRNA
common_peak2-27628-23-49--0.922088685265644-1.85759988472352	chr3	105800452	105801722	+	0	NA	intron (NM_001200028, intron 5 of 5)	intron (NM_001200028, intron 5 of 5)	3328	NM_029604	100503311	Mm.386825	NM_029604	ENSMUSG00000010136	Pifo	1700027A23Rik	primary cilia formation	protein-coding
common_peak1-15263-26-20-0.535581669379702-0.738267116931592	chr4	24495944	24496806	+	0	NA	intron (NM_199467, intron 13 of 23)	intron (NM_199467, intron 13 of 23)	72766	NM_199467	212377	Mm.120919	NM_199467	ENSMUSG00000045751	Mms22l	F730047E07Rik|Gm134	MMS22-like, DNA repair protein	protein-coding
unique_peak2-34679-6-12--1.13504160776079-1.45089835786865	chr15	8445959	8446461	+	0	NA	Intergenic	Intergenic	-51747	NM_201232	71175	Mm.240329	NM_027707	ENSMUSG00000022141	Nipbl	Idn3	Nipped-B homolog (Drosophila)	protein-coding
common_peak2-28422-50-60-0.110202978916066-0.363095533294599	chr4	147904192	147905179	+	0	NA	exon (NM_020009, exon 35 of 58)	exon (NM_020009, exon 35 of 58)	-27851	NM_016699	50912	Mm.266635	NM_016699	ENSMUSG00000017264	Exosc10	PM-Scl|PM/Scl-100|Pmscl2|RRP6|p2|p3|p4	exosome component 10	protein-coding
common_peak2-28839-30-44--0.322177686837802-0.475038482441584	chr5	67306515	67307598	+	0	NA	intron (NM_001001980, intron 3 of 25)	intron (NM_001001980, intron 3 of 25)	-52599	NM_001256122	77569	Mm.374778	NM_001001980	ENSMUSG00000037736	Limch1	3732412D22Rik|mKIAA1102	LIM and calponin homology domains 1	protein-coding
common_peak2-27492-34-20-0.989751104222505-2.03367508793052	chr3	94821166	94821876	+	0	NA	Intergenic	MIR|SINE|MIR	-2361	NM_030074	78266	Mm.389478	NM_030074	ENSMUSG00000019338	Zfp687	4931408L03Rik|Znf687|mKIAA1441	zinc finger protein 687	protein-coding
common_peak1-18893-24-43--0.666221715869581-0.994385396256659	chr9	35420988	35421787	+	0	NA	Intergenic	MLT1D|LTR|MaLR	-1917	NM_020264	56872	Mm.390143	NM_020264	ENSMUSG00000032099	Pate4	9530004K16Rik|Pate-B|Svs7	prostate and testis expressed 4	protein-coding
unique_peak1-179-19-2-2.81772482594053-4.27364484827118	chr1	74320888	74321740	+	0	NA	Intergenic	Intergenic	-3860	NM_174985	227289	Mm.246587	NM_174985	ENSMUSG00000064272	Gpbar1	BG37|GPCR|GPR131|M-BAR|TGR5	G protein-coupled bile acid receptor 1	protein-coding
unique_peak1-3056-18-1-3.31291915122835-4.8766546284749	chr18	8051345	8052009	+	0	NA	Intergenic	Intergenic	182482	NM_153085	225131	Mm.204524	NM_153085	ENSMUSG00000024283	Wac	1110067P07Rik|A230035H12Rik|AI256735|AI256776|Wwp4	WW domain containing adaptor with coiled-coil	protein-coding
common_peak1-8502-17-35--0.951628663237274-1.34608670144205	chr10	81863845	81864459	+	0	NA	Intergenic	Intergenic	91211	NM_001255990	432480	Mm.280394	NM_001255990	ENSMUSG00000094186	Gm1553	Lcrn	predicted gene 1553	protein-coding
common_peak1-17709-11-4-1.18676548936425-1.68134727924692	chr7	78973731	78974222	+	0	NA	Intergenic	Intergenic	477505	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding
common_peak2-27382-12-6-0.841421063030034-1.58711810488664	chr3	87159525	87159881	+	0	NA	Intergenic	Intergenic	-2100	NM_009690	11801	Mm.6676	NM_009690	ENSMUSG00000015854	Cd5l	1/6|AAC-11|AI047839|Api6|CT2|Pdp|Sp-alpha	CD5 antigen-like	protein-coding
unique_peak2-32828-11-21--0.950738034385684-0.991115276827166	chr1	189778711	189779554	+	0	NA	intron (NM_001243792, intron 2 of 7)	ORR1E|LTR|MaLR	-42574	NM_011935	26381	Mm.89989	NM_011935	ENSMUSG00000026610	Esrrg	ERR3|Errg|NR3B3|mKIAA0832	estrogen-related receptor gamma	protein-coding
common_peak1-7900-18-18-0.0649916377847664-0.323898164595606	chr1	135687754	135688465	+	0	NA	Intergenic	ORR1B1|LTR|MaLR	-37785	NM_213616	381290	Mm.188617	NM_213616	ENSMUSG00000026463	Atp2b4	Pmca4	ATPase, Ca++ transporting, plasma membrane 4	protein-coding
unique_peak1-5211-13-12-0.0780323124966764-0.334470287753051	chr5	36069431	36069924	+	0	NA	intron (NM_194344, intron 1 of 17)	intron (NM_194344, intron 1 of 17)	2248	NM_194344	231147	Mm.290429	NM_194344	ENSMUSG00000036553	Sh3tc1	4631428G15|BC024909	SH3 domain and tetratricopeptide repeats 1	protein-coding
unique_peak2-35089-1-6--2.43441193227435-1.56314192529759	chr16	18235481	18235815	+	0	NA	promoter-TSS (NM_172151)	promoter-TSS (NM_172151)	-419	NM_172151	27801	Mm.326263	NM_172151	ENSMUSG00000060166	Zdhhc8	D16H22S1738E|DHHC-8|E330009O14Rik|Op53c05|ZDHHCL1	zinc finger, DHHC domain containing 8	protein-coding
common_peak1-9666-17-18--0.0296311752385474-0.306899554715732	chr12	3572247	3572976	+	0	NA	promoter-TSS (NM_007886)	promoter-TSS (NM_007886)	220	NR_027870	13528	Mm.286202	NM_007886	ENSMUSG00000071454	Dtnb	-	dystrobrevin, beta	protein-coding
common_peak2-20208-102-141-0.121341357334872-0.425469896204231	chr1	178336423	178338854	+	0	NA	Intergenic	Intergenic	-132195	NM_176916	319455	Mm.338001	NM_176916	ENSMUSG00000055214	Pld5	B230365F16Rik	phospholipase D family, member 5	protein-coding
common_peak2-29673-10-12--0.344024373132323-0.340565874754526	chr6	72315702	72316292	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-3622	NM_025607	66510	Mm.170023	NM_025607	ENSMUSG00000055850	Rnf181	1700047F16Rik|2500002L14Rik|6230415N01Rik|C77350	ring finger protein 181	protein-coding
common_peak2-27579-96-193--0.433861627831799-1.85362144100083	chr3	100684319	100686498	+	0	NA	intron (NM_178594, intron 2 of 5)	intron (NM_178594, intron 2 of 5)	-41008	NM_001165952	229644	Mm.189351	NM_194343	ENSMUSG00000033233	Trim45	4921530N01Rik	tripartite motif-containing 45	protein-coding
unique_peak2-36341-4-10--1.48289213249054-1.5150158574804	chr2	92205913	92206228	+	0	NA	intron (NM_001290773, intron 13 of 14)	intron (NM_001290773, intron 13 of 14)	5144	NM_001290774	228366	Mm.31158	NM_172670	ENSMUSG00000040434	Gyltl1b	5730485C17Rik|AI891893|Large2|Largel|mKIAA4105	glycosyltransferase-like 1B	protein-coding
common_peak2-26068-37-43-0.0665614528485214-0.322992865635707	chr2	73891832	73892627	+	0	NA	Intergenic	Intergenic	-142878	NM_175015	228033	Mm.2966	NM_175015	ENSMUSG00000018770	Atp5g3	6030447M23	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9)	protein-coding
common_peak2-30673-15-14-0.105274154947137-0.330004445983672	chr7	102686809	102687383	+	0	NA	Intergenic	Intergenic	-672051	NM_011858	23966	Mm.254610	NM_011858	ENSMUSG00000048078	Tenm4	Doc4|ELM2|Odz4|R75022|Ten-m4|l(7)-3Rn|l7Rn3|mKIAA1302	teneurin transmembrane protein 4	protein-coding
common_peak2-26988-9-9--0.132314688483142-1.03275496310833	chr2	168072584	168073083	+	0	NA	Intergenic	MTC|LTR|MaLR	16711	NM_001160330	69372	Mm.482182	NM_001160330	ENSMUSG00000074576	Mocs3	1700020H17Rik|Uba4	molybdenum cofactor synthesis 3	protein-coding
common_peak1-11601-54-70-0.0233386421250517-0.307147021604589	chr16	17721989	17723271	+	0	NA	intron (NM_001285886, intron 1 of 16)	intron (NM_001285886, intron 1 of 16)	363	NM_001285886	94112	Mm.208970	NM_033609	ENSMUSG00000012114	Med15	A230074L19Rik|AW536074|Pcqap|mPcqap	mediator complex subunit 15	protein-coding
common_peak2-19591-22-18-0.399356591643819-0.549581527953406	chr1	21218531	21219099	+	0	NA	intron (NM_029398, intron 4 of 4)	intron (NM_029398, intron 4 of 4)	10159	NM_029398	75712	Mm.441478	NM_029398	ENSMUSG00000025933	Tmem14a	5730496E24Rik|C85783|PTD011	transmembrane protein 14A	protein-coding
common_peak2-28175-15-23--0.5727977501655-0.575340103425218	chr4	109280217	109281052	+	0	NA	Intergenic	L1Md_A|LINE|L1	57343	NM_007671	12580	Mm.1912	NM_007671	ENSMUSG00000028551	Cdkn2c	C77269|INK4c|p18|p18-INK4c|p18-INK6|p18INK4c	cyclin-dependent kinase inhibitor 2C (p18, inhibits CDK4)	protein-coding
unique_peak1-1745-10-2-1.77145284428761-2.09384600808989	chr13	102896877	102897363	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-358948	NM_001077495	18708	Mm.259333	NM_001024955	ENSMUSG00000041417	Pik3r1	PI3K|p50alpha|p55alpha|p85alpha	phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)	protein-coding
common_peak2-25513-187-204-0.644663684258291-5.92370056137065	chr19	5636569	5638573	+	0	NA	promoter-TSS (NM_009045)	promoter-TSS (NM_009045)	81	NM_009045	19697	Mm.249966	NM_009045	ENSMUSG00000024927	Rela	p65	v-rel reticuloendotheliosis viral oncogene homolog A (avian)	protein-coding
common_peak1-11046-150-216-0.17903785062461-0.724341881525702	chr15	51990152	51992494	+	0	NA	Intergenic	Intergenic	119670	NM_175503	239435	Mm.24204	NM_175503	ENSMUSG00000068522	Aard	A5D3|AV328152	alanine and arginine rich domain containing protein	protein-coding
common_peak2-20063-13-21--0.680959587999529-0.607095980551316	chr1	152901965	152902708	+	0	NA	Intergenic	Intergenic	-61771	NM_001024720	545370	Mm.379425	NM_001024720	ENSMUSG00000066842	Hmcn1	EG545370|Gm201	hemicentin 1	protein-coding
common_peak2-20741-22-16-0.559821263837065-0.733541631673787	chr10	108332719	108333472	+	0	NA	intron (NM_009306, intron 2 of 10)	L1_Mus2|LINE|L1	114936	NM_009306	20979	Mm.289702	NM_009306	ENSMUSG00000035864	Syt1	AW124717|G630098F17Rik|SytI	synaptotagmin I	protein-coding
common_peak1-14100-16-23--0.466698858453094-0.497202060940027	chr2	125782059	125782842	+	0	NA	intron (NM_001291002, intron 8 of 9)	Lx|LINE|L1	-77944	NM_008008	14178	Mm.330557	NM_008008	ENSMUSG00000027208	Fgf7	Kgf	fibroblast growth factor 7	protein-coding
common_peak2-23546-23-19-0.399839409621718-0.538442145997695	chr15	78845155	78845968	+	0	NA	Intergenic	MIRb|SINE|MIR	-4090	NR_045746	100038602	Mm.417074	NR_045746		Gm10865	ENSMUSG00000075558	predicted gene 10865	ncRNA
common_peak1-11454-114-110-0.669538655358261-3.72899790201527	chr15	101283488	101284829	+	0	NA	3' UTR (NM_025487, exon 5 of 5)	3' UTR (NM_025487, exon 5 of 5)	5982	NM_025487	66322	Mm.158111	NM_025487	ENSMUSG00000063971	1700011A15Rik	-	RIKEN cDNA 1700011A15 gene	protein-coding
common_peak1-7709-147-180-0.405623039599482-2.16867513679851	chr1	86524752	86526626	+	0	NA	Intergenic	Intergenic	969696	NM_030194	109032	Mm.335802	NM_030194	ENSMUSG00000070034	Sp110	5031415C07Rik|52kDa|5830484A20Rik|ENSMUSG00000075603|Ifi75|Ipr1	Sp110 nuclear body protein	protein-coding
common_peak2-20675-18-49--1.33093703854637-3.03172027028484	chr10	86021843	86022737	+	0	NA	Intergenic	L1_Mur1|LINE|L1	-60649	NM_013722	27204	Mm.394931	NM_013722	ENSMUSG00000059602	Syn3	-	synapsin III	protein-coding
common_peak1-11632-38-44-0.0795995629688555-0.338806640379593	chr16	20800304	20801837	+	0	NA	Intergenic	MLT2B2|LTR|ERVL	-66486	NM_009379	21832	Mm.3943	NM_009379	ENSMUSG00000022847	Thpo	Mgdf|Ml|Mpllg|Tpo	thrombopoietin	protein-coding
common_peak1-18957-18-29--0.593971444380167-0.662033714151235	chr9	51962917	51963757	+	0	NA	intron (NM_001162921, intron 1 of 5)	intron (NM_001162921, intron 1 of 5)	12879	NM_001162921	244871	Mm.295686	NM_001162921	ENSMUSG00000035164	Zc3h12c	A230108E06|C230027N18Rik|mKIAA1726	zinc finger CCCH type containing 12C	protein-coding
common_peak2-22877-56-44-0.743742729109568-2.07502359373632	chr14	31250825	31251885	+	0	NA	intron (NM_028981, intron 1 of 46)	intron (NM_028981, intron 1 of 46)	-41396	NM_133761	75901	Mm.28733	NM_133761	ENSMUSG00000021962	Dcp1a	1110066A22Rik|4930568L04Rik|AU019772|D14Ertd817e|Mitc1|SMIF	DCP1 decapping enzyme homolog A (S. cerevisiae)	protein-coding
unique_peak1-4519-7-2-1.21412832957703-1.45399745587252	chr3	27892260	27892721	+	0	NA	intron (NM_008875, intron 1 of 25)	intron (NM_008875, intron 1 of 25)	9397	NM_008875	18805	Mm.212039	NM_008875	ENSMUSG00000027695	Pld1	AA536939|C85393|Pld1a|Pld1b	phospholipase D1	protein-coding
unique_peak2-33404-1-6--2.43441193227435-1.56314192529759	chr11	54217000	54217389	+	0	NA	intron (NM_029105, intron 9 of 13)	L1MC1|LINE|L1	33040	NM_029105	74847	Mm.486538	NM_029105	ENSMUSG00000020332	4930404A10Rik	-	RIKEN cDNA 4930404A10 gene	protein-coding
common_peak1-12358-20-46--1.06651406708644-2.18062287223157	chr17	56934845	56935591	+	0	NA	intron (NM_009056, intron 5 of 16)	MYSERV16_I-int|LTR|ERVK	25519	NM_001195673	100504446	Mm.46157	NM_001195673	ENSMUSG00000090273	Prr22	Gm546	proline rich 22	protein-coding
common_peak1-9318-22-14-0.740393509478886-0.983972868822056	chr11	94548724	94549624	+	0	NA	Intergenic	Intergenic	-10367	NM_145828	217119	Mm.100638	NM_145828	ENSMUSG00000020868	Xylt2	E030002B02Rik|XT-II|XT2|xylT-II	xylosyltransferase II	protein-coding
common_peak2-29953-67-71-0.374486481340683-0.943815179304744	chr6	117878750	117880418	+	0	NA	Intergenic	PB1D10|SINE|Alu	7769	NM_033648	108017	Mm.250392	NM_033648		Fxyd4	0610008I02Rik|AI267073|Chif	FXYD domain-containing ion transport regulator 4	protein-coding
unique_peak1-867-8-0-3.00522241794757-2.70926996097583	chr11	22906447	22906987	+	0	NA	Intergenic	Intergenic	-6670	NM_028672	73873	Mm.252406	NM_028672	ENSMUSG00000049811	Fam161a	4930430E16Rik	family with sequence similarity 161, member A	protein-coding
common_peak2-26470-35-24-0.78751406868778-1.48724131519612	chr2	77175980	77177132	+	0	NA	Intergenic	RLTR25A|LTR|ERVK	-57907	NM_175465	228071	Mm.27120	NM_175465	ENSMUSG00000042272	Sestd1	1500031J16Rik|A930010O20|Solo/Trio8	SEC14 and spectrin domains 1	protein-coding
unique_peak2-38607-3-22--2.93754504601629-3.8429424127101	chr7	79858280	79859203	+	0	NA	Intergenic	Intergenic	388213	NR_046024	625243	Mm.261798	NR_046024		Gm6567	-	predicted gene 6567	ncRNA
common_peak2-23846-51-61-0.120727515215698-0.362125042338591	chr15	102024886	102026161	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-6049	NM_144942	246277	Mm.296382	NM_144942	ENSMUSG00000023044	Csad	Csd	cysteine sulfinic acid decarboxylase	protein-coding
unique_peak1-4938-8-0-3.00522241794757-2.70926996097583	chr4	73498021	73498542	+	0	NA	Intergenic	MERVL-int|LTR|ERVL	23857	NM_001177578	667780	Mm.457901	NM_001177578	ENSMUSG00000096333	Gm13871	OTTMUSG00000014862	predicted gene 13871	protein-coding
common_peak1-13578-11-13--0.298661337805991-0.337263207250336	chr2	13405720	13406226	+	0	NA	intron (NM_001081084, intron 6 of 66)	intron (NM_001081084, intron 6 of 66)	7530	NM_001081084	65969	Mm.313915	NM_001081084	ENSMUSG00000026726	Cubn	AA408369|AL022750|D2Wsu88e	cubilin (intrinsic factor-cobalamin receptor)	protein-coding
unique_peak1-319-6-1-1.5653981103803-1.56314192529759	chr1	131929523	131929828	+	0	NA	intron (NM_172485, intron 15 of 27)	L1Md_A|LINE|L1	389901	NM_007827	13137	Mm.436759	NM_007827	ENSMUSG00000026401	Daf2	AI323748|Cd55b|Daf|Daf-TM|TM-DAF	decay accelerating factor 2	protein-coding
unique_peak2-37674-4-5--0.608423014574403-0.909929411522249	chr5	96210215	96210556	+	0	NA	intron (NM_001122668, intron 1 of 3).2	Lx5|LINE|L1	5496	NM_001122668	665943	Mm.348795	NM_001122668	ENSMUSG00000072813	E330014E10Rik	-	RIKEN cDNA E330014E10 gene	protein-coding
common_peak2-26563-19-11-0.81772482594053-0.991115276827166	chr2	102945006	102945554	+	0	NA	Intergenic	Intergenic	31448	NM_019735	56369	Mm.24772	NM_019735	ENSMUSG00000010911	Apip	APIP2|CGI-29|Mmrp19	APAF1 interacting protein	protein-coding
common_peak2-27986-18-11-0.727956650507195-0.876666802405043	chr4	43729014	43729640	+	0	NA	Intergenic	Intergenic	-9889	NM_019486	56015	Mm.377126	NM_019486	ENSMUSG00000046450	Olfr71	MOR262-4|mOR17	olfactory receptor 71	protein-coding
common_peak2-31030-28-68--1.05556533695671-2.99016688567355	chr8	13159214	13159995	+	0	NA	intron (NM_010684, intron 1 of 8)	intron (NM_010684, intron 1 of 8)	469	NM_010684	16783	Mm.16716	NM_010684	ENSMUSG00000031447	Lamp1	AI196048|CD107a|Lamp-1	lysosomal-associated membrane protein 1	protein-coding
common_peak1-8709-18-11-0.727956650507195-0.876666802405043	chr11	95092630	95093445	+	0	NA	Intergenic	Intergenic	-29806	NM_053093	93670	Mm.40085	NM_053093	ENSMUSG00000020872	Tac4	AW489379|PPT-C	tachykinin 4	protein-coding
common_peak2-27637-35-63--0.568629741537496-1.12538602347822	chr3	107332116	107333173	+	0	NA	Intergenic	(A)n|Simple_repeat|Simple_repeat	-11708	NM_172271	229706	Mm.212867	NM_172271	ENSMUSG00000027894	Slc6a17	D130012J15Rik|Ntt4	solute carrier family 6 (neurotransmitter transporter), member 17	protein-coding
unique_peak2-35285-3-13--2.22133801201688-2.36932189928148	chr17	6317118	6317529	+	0	NA	intron (NM_001166629, intron 1 of 4)	intron (NM_001166629, intron 1 of 4)	151	NM_001166629	100310872	Mm.381893	NM_001166629		Dynlt1a	-	dynein light chain Tctex-type 1A	protein-coding
unique_peak1-731-8-4-0.683294323060208-1.21878474469819	chr10	96806626	96807121	+	0	NA	Intergenic	Intergenic	-79239	NR_039547	100628616		NR_039547		Mir3966	mmu-mir-3966|mu-mir-3966	microRNA 3966	ncRNA
common_peak2-22869-5-8--0.874305337448166-1.10484139239135	chr14	30547855	30548258	+	0	NA	Intergenic	L1MC4|LINE|L1	-13006	NM_009785	12294	Mm.386754	NM_009785	ENSMUSG00000021991	Cacna2d3	Cacnad3	calcium channel, voltage-dependent, alpha2/delta subunit 3	protein-coding
common_peak2-27286-14-18--0.348711353085941-0.360333814299795	chr3	58371947	58372558	+	0	NA	Intergenic	RMER16-int|LTR|ERVK	-8328	NM_001040396	69227	Mm.270950	NM_001040396	ENSMUSG00000075700	Selt	2810407C02Rik|5730408P04Rik	selenoprotein T	protein-coding
common_peak1-12240-26-42--0.498365662543636-0.737357778720989	chr17	35556831	35557934	+	0	NA	Intergenic	Intergenic	-4410	NM_023124	15019	Mm.486287	NM_023124		H2-Q8	H-2Q8|MMS10-T|Ms10t|Qa-2|Qa-8|Qa8	histocompatibility 2, Q region locus 8	protein-coding
unique_peak1-6581-7-3-0.799090830298189-1.23214870625617	chr7	142472899	142473418	+	0	NA	Intergenic	Intergenic	12856	NM_001163611	100043254	Mm.192092	NM_001163611	ENSMUSG00000073804	Nps	ENSMUSG00000073804	neuropeptide S	protein-coding
common_peak1-17845-96-98-0.536694594275719-2.21132465866355	chr7	112022419	112024322	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	-5853	NM_146814	258810	Mm.377700	NM_146814	ENSMUSG00000073917	Olfr665	MOR34-7	olfactory receptor 665	protein-coding
common_peak2-24631-14-20--0.493101262421116-0.456667090758524	chr17	34942583	34943296	+	0	NA	Intergenic	MuRRS4-int|LTR|ERV1	-1568	NM_009995	13079	Mm.440407	NM_009995	ENSMUSG00000024365	Cyp21a1	21-OH|21OH|21OHA|21OHB|CYP21OH-A|Cyp21|Cyp21-ps1|Cyp21B|Cyp21a2-ps|Cyp21a2ps|Oh21-1|Oh21-2	cytochrome P450, family 21, subfamily a, polypeptide 1	protein-coding
unique_peak2-38152-6-5--0.0195643903408542-0.947717972411649	chr6	86319208	86319584	+	0	NA	3' UTR (NM_025591, exon 3 of 3)	3' UTR (NM_025591, exon 3 of 3)	-2138	NM_026506	68011	Mm.276802	NM_026506	ENSMUSG00000057278	Snrpg	2810024K17Rik|AL022803|SMG|sm-G|snRNP-G	small nuclear ribonucleoprotein polypeptide G	protein-coding
unique_peak2-36795-0-6--3.64748585253182-1.56314192529759	chr3	81494704	81495045	+	0	NA	Intergenic	L1Md_T|LINE|L1	-241664	NM_177662	229445	Mm.254642	NM_177662	ENSMUSG00000028015	Ctso	A330105D01Rik|A430056C07|AI118514	cathepsin O	protein-coding
common_peak2-26816-43-66--0.283526004934069-0.518477330661964	chr2	151541879	151543670	+	0	NA	3' UTR (NM_212446, exon 7 of 7)	3' UTR (NM_212446, exon 7 of 7)	15030	NM_001160363	108832	Mm.103494	NM_001160363	ENSMUSG00000044364	Tmem74b	5430405G05Rik	transmembrane protein 74B	protein-coding
common_peak2-29685-12-11-0.0638134843664826-0.337263207250336	chr6	72616834	72617384	+	0	NA	intron (NM_009332, intron 3 of 11)	intron (NM_009332, intron 3 of 11)	37284	NR_040421	100038714	Mm.321330	NR_040421		Gm15401	ENSMUSG00000072999|OTTMUSG00000021199	predicted gene 15401	ncRNA
common_peak2-30545-21-19-0.247561170378873-0.427564438475253	chr7	73537817	73538459	+	0	NA	intron (NM_053080, intron 12 of 12)	intron (NM_053080, intron 12 of 12)	-4911	NM_146191	233328	Mm.33284	NM_146191	ENSMUSG00000015133	Lrrk1	AW319595|C230002E15Rik|D130026O16Rik|mKIAA1790	leucine-rich repeat kinase 1	protein-coding
unique_peak1-7327-14-2-2.31425365963649-3.28500101358144	chr9	122176243	122177057	+	0	NA	intron (NM_001271873, intron 4 of 12)	intron (NM_001271873, intron 4 of 12)	6496	NR_106185	102465896		NR_106185		Mir8106	mmu-mir-8106	microRNA mir-8106	ncRNA
common_peak2-29645-50-42-0.614675561776854-1.46887387725851	chr6	66910304	66911528	+	0	NA	intron (NM_001177560, intron 3 of 4)	RMER19C|LTR|ERVK	64031	NM_001177558	14701	Mm.234342	NM_025278	ENSMUSG00000036402	Gng12	2010305F15Rik|AA536815|AI115529|AI314170|AI842738	guanine nucleotide binding protein (G protein), gamma 12	protein-coding
common_peak2-29252-6-5--0.0195643903408542-0.947717972411649	chr5	140321220	140321570	+	0	NA	Intergenic	Intergenic	-18598	NM_025604	66506	Mm.29070	NM_025604	ENSMUSG00000029551	Psmg3	1810042K04Rik|4930403H09Rik|AI303239	proteasome (prosome, macropain) assembly chaperone 3	protein-coding
unique_peak2-36489-1-8--2.79698201165906-2.05605744720049	chr2	153236366	153236801	+	0	NA	3' UTR (NM_001134300, exon 11 of 11)	3' UTR (NM_001134300, exon 11 of 11)	33632	NM_001001986	329540	Mm.50600	NM_001001986	ENSMUSG00000061411	Nol4l	4931410H15|8430427H17Rik|AI429157|Gm1636	nucleolar protein 4-like	protein-coding
common_peak1-10860-20-14-0.581184188982674-0.690311289528838	chr14	122105094	122105775	+	0	NA	intron (NM_134074, intron 1 of 52)	B1_Mur4|SINE|Alu	-7795	NM_001081039	105445	Mm.441054	NM_134074	ENSMUSG00000025558	Dock9	AA959601|AW538057|B230309H04Rik|D14Wsu89e|Zizimin1|mKIAA1058	dedicator of cytokinesis 9	protein-coding
common_peak2-26776-27-32--0.0528481684632176-0.301029995663997	chr2	144186128	144187344	+	0	NA	Intergenic	RSINE1|SINE|B4	-7983	NM_001164813	100048644	Mm.227925	NM_001164813		Pet117	Gm20571	PET117 homolog (S. cerevisiae)	protein-coding
unique_peak2-37512-14-8-0.729291158915332-0.771068449301682	chr5	17480146	17480791	+	0	NA	intron (NM_001081143, intron 1 of 7)	intron (NM_001081143, intron 1 of 7)	12080	NM_001081143	242851	Mm.332230	NM_001081143	ENSMUSG00000028777	Gnat3	Ggust|Gtn	guanine nucleotide binding protein, alpha transducing 3	protein-coding
common_peak1-8068-25-16-0.774387064094767-1.1282783422172	chr1	177441144	177441933	+	0	NA	Intergenic	Intergenic	-18862	NM_001199003	24012	Mm.7956	NM_011880		Rgs7	-	regulator of G protein signaling 7	protein-coding
common_peak1-9155-43-72--0.407261373356315-0.796654548817852	chr11	77606895	77608130	+	0	NA	intron (NM_011586, intron 1 of 39)	B3|SINE|B2	-7288	NM_001291214	360013	Mm.341248	NM_011586	ENSMUSG00000000631	Myo18a	MAJN|MyoPDZ|MysPDZ	myosin XVIIIA	protein-coding
common_peak1-15357-12-8-0.478850983645327-0.562038191119709	chr4	57299923	57300373	+	0	NA	intron (NM_011207, intron 1 of 25)	intron (NM_011207, intron 1 of 25)	14561	NM_011207	545622	Mm.246552	NM_011207	ENSMUSG00000038764	Ptpn3	9530011I20Rik|PTP-H1|PTPCL	protein tyrosine phosphatase, non-receptor type 3	protein-coding
unique_peak2-33000-4-9--1.34538860874061-1.36011389749466	chr10	60932164	60932566	+	0	NA	Intergenic	Intergenic	-6216	NM_153542	216011	Mm.136116	NM_153542	ENSMUSG00000037151	Lrrc20	BC036304	leucine rich repeat containing 20	protein-coding
unique_peak1-6098-6-2-0.980435609659146-1.26211192963361	chr6	125415516	125415976	+	0	NA	intron (NM_007657, intron 2 of 7)	B3A|SINE|B2	29027	NM_007657	12527	Mm.210676	NM_007657	ENSMUSG00000030342	Cd9	Tspan29	CD9 antigen	protein-coding
unique_peak1-2055-8-2-1.42025991722641-1.65811743852845	chr15	27513987	27514456	+	0	NA	intron (NM_020332, intron 8 of 11)	intron (NM_020332, intron 8 of 11)	12972	NR_106065	102466808		NR_106065		Mir7117	mmu-mir-7117	microRNA mir-7117	ncRNA
common_peak2-22826-4-9--1.34538860874061-1.36011389749466	chr14	20155892	20156272	+	0	NA	Intergenic	Intergenic	265727	NM_001024706	432825	Mm.327147	NM_001024706	ENSMUSG00000095024	Gm5458	EG432825	predicted gene 5458	protein-coding
unique_peak2-34920-5-8--0.874305337448166-1.10484139239135	chr15	84715869	84716284	+	0	NA	Intergenic	Intergenic	-29517	NR_030731	271305	Mm.101022	NM_001081166	ENSMUSG00000016624	Phf21b	A730032D07Rik	PHD finger protein 21B	protein-coding
common_peak1-8589-53-81--0.216578992202155-0.443993257208683	chr10	105840796	105842202	+	0	NA	Intergenic	Intergenic	-65867	NM_177373	327814	Mm.391424	NM_177373	ENSMUSG00000053825	Ppfia2	5330438O12|B230207K17Rik|E130120L08Rik|mKIAA4112	protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2	protein-coding
common_peak2-19554-20-29--0.418815811017326-0.51032171069054	chr1	4807468	4808441	+	0	NA	intron (NM_008866, intron 2 of 8)	MTA_Mm-int|LTR|MaLR	9980	NM_008866	18777	Mm.299955	NM_008866	ENSMUSG00000025903	Lypla1	Pla1a	lysophospholipase 1	protein-coding
common_peak2-20024-25-70--1.28789721415958-4.10152004130839	chr1	135861198	135863266	+	0	NA	Intergenic	Intergenic	-44254	NM_054077	116847	Mm.214514	NM_054077	ENSMUSG00000041577	Prelp	7330409J17Rik|SLRR2A	proline arginine-rich end leucine-rich repeat	protein-coding
common_peak2-27328-26-54--0.853460621366198-1.81099027427052	chr3	68494258	68496003	+	0	NA	promoter-TSS (NM_008351)	promoter-TSS (NM_008351)	-216	NM_008351	16159	Mm.103783	NM_008351	ENSMUSG00000027776	Il12a	IL-12p35|Il-12a|Ll12a|p35	interleukin 12a	protein-coding
common_peak2-31364-17-25--0.482143379936054-0.479250674391597	chr8	84968990	84969748	+	0	NA	Intergenic	Intergenic	-42884	NM_008357	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
unique_peak2-37291-3-10--1.87341470859657-1.75805390616669	chr4	118620825	118621311	+	0	NA	Intergenic	L1VL4|LINE|L1	-13504	NM_133892	100470	Mm.26698	NM_133892	ENSMUSG00000024903	Lao1	AW990848	L-amino acid oxidase 1	protein-coding
common_peak2-30172-111-143-0.247768789967856-0.84392737372674	chr6	149187898	149189081	+	0	NA	Intergenic	Intergenic	-51255	NM_001113424	232566	Mm.209147	NM_001113424	ENSMUSG00000068250	Amn1	5830467E07Rik|A230083D09|C730024G19Rik	antagonist of mitotic exit network 1	protein-coding
common_peak1-13600-29-20-0.71997265783635-1.20071330053879	chr2	18689548	18690585	+	0	NA	Intergenic	Intergenic	69417	NM_001001334	381350	Mm.330024	NM_001001334		BC061194	-	cDNA sequence BC061194	protein-coding
common_peak2-28307-8-6-0.197867495889966-1.03789460276074	chr4	132946785	132947282	+	0	NA	intron (NM_016981, intron 1 of 11)	intron (NM_016981, intron 1 of 11)	21342	NR_039582	100628620		NR_039582	miRBase:MI0018031	Mir5122	mmu-mir-5122|mu-mir-5122	microRNA 5122	ncRNA
common_peak1-9718-12-7-0.648775985087639-0.697979855752659	chr12	31500150	31500678	+	0	NA	Intergenic	Intergenic	-68775	NM_001159743	100294583	Mm.399726	NM_001159743	ENSMUSG00000054204	Fam150b	6230419C23Rik	family with sequence similarity 150, member B	protein-coding
common_peak1-10749-15-6-1.20480982849805-1.32521814697968	chr14	69485829	69486501	+	0	NA	Intergenic	Intergenic	-161181	NM_009285	20855	Mm.20911	NM_009285	ENSMUSG00000014813	Stc1	Stc	stanniocalcin 1	protein-coding
common_peak1-11829-17-15-0.218296338205038-0.403453972741633	chr16	78575952	78576788	+	0	NA	intron (NM_001252440, intron 1 of 4)	intron (NM_001252440, intron 1 of 4)	563	NM_001252438	67102	Mm.37332	NM_025967		D16Ertd472e	1700010I10Rik|2310009O17Rik|E330003K22Rik|Eurl	DNA segment, Chr 16, ERATO Doi 472, expressed	protein-coding
common_peak1-11280-44-67--0.265570006681804-0.476339052167862	chr15	82353485	82355119	+	0	NA	Intergenic	RLTR10-int|LTR|ERVK	-31226	NM_201360	380997	Mm.482248	NM_201360	ENSMUSG00000096852	Cyp2d12	9030605E09Rik	cytochrome P450, family 2, subfamily d, polypeptide 12	protein-coding
common_peak1-17117-12-18--0.599151528355947-0.476916024233333	chr6	114988255	114988792	+	0	NA	promoter-TSS (NM_026894)	promoter-TSS (NM_026894)	-631	NM_026894	68971	Mm.24937	NM_026894	ENSMUSG00000030316	Tamm41	1500001M20Rik|TAM41	TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)	protein-coding
common_peak1-10672-6-10--0.894033508256995-1.21398586181642	chr14	52104408	52104859	+	0	NA	Intergenic	Intergenic	32996	NM_009486	22301	Mm.482572	NM_009486	ENSMUSG00000070448	Vmn2r89	V2r10|V2r11	vomeronasal 2, receptor 89	protein-coding
unique_peak2-36304-7-12--0.901348887842903-1.31827279259406	chr2	73386774	73387303	+	0	NA	Intergenic	Intergenic	-19494	NM_153138	215280	Mm.223504	NM_153138	ENSMUSG00000075284	Wipf1	AI115543|D2Ertd120e|WIP|Waspip	WAS/WASL interacting protein family, member 1	protein-coding
common_peak1-8917-32-20-0.886774596440899-1.65365064026544	chr11	51619702	51620617	+	0	NA	Intergenic	Intergenic	42994	NM_025535	66397	Mm.196592	NM_025535	ENSMUSG00000020386	Sar1b	2310075M17Rik|2900019I22Rik|CMRD|Sara1b|Sara2|Sarb	SAR1 gene homolog B (S. cerevisiae)	protein-coding
unique_peak2-39586-2-14--2.82434485187184-3.03832868024006	chr9	76003072	76003783	+	0	NA	Intergenic	Intergenic	58037	NM_205844	404194	Mm.213862	NM_205844	ENSMUSG00000059383	Gfral	AY457637|Gral	GDNF family receptor alpha like	protein-coding
unique_peak2-36844-3-11--1.99894559068043-1.95434855131066	chr3	89227440	89228065	+	0	NA	intron (NM_001113331, intron 4 of 11)	intron (NM_001113331, intron 4 of 11)	2209	NM_001113331	20416	Mm.86595	NM_011368	ENSMUSG00000042626	Shc1	Shc|ShcA|p66|p66shc	src homology 2 domain-containing transforming protein C1	protein-coding
unique_peak1-4584-7-3-0.799090830298189-1.23214870625617	chr3	57386351	57386803	+	0	NA	Intergenic	ID_B1|SINE|B4	-6745	NM_001168281	97064	Mm.405029	NM_133784	ENSMUSG00000027803	Wwtr1	2310058J06Rik|2610021I22Rik|C78399|Taz	WW domain containing transcription regulator 1	protein-coding
common_peak2-19783-44-53-0.067005332405067-0.332622013471003	chr1	84838198	84839551	+	0	NA	intron (NM_025386, intron 1 of 3)	B2_Mm1t|SINE|B2	2458	NM_025386	66153	Mm.381192	NM_025386	ENSMUSG00000073633	Fbxo36	0610008D19Rik|1110020F21Rik|2410002G19Rik|D1Ertd757e	F-box protein 36	protein-coding
common_peak1-8598-8-13--0.802132504110034-0.562038191119711	chr10	111516178	111516696	+	0	NA	TTS (NM_027018)	TTS (NM_027018)	-3973	NM_026223	67537	Mm.292351	NM_026223	ENSMUSG00000020214	Glipr1l2	4921508O11Rik	GLI pathogenesis-related 1 like 2	protein-coding
common_peak2-27313-18-16-0.225456309978012-0.397739447719379	chr3	65494069	65494934	+	0	NA	intron (NM_001166659, intron 3 of 12)	intron (NM_001166659, intron 3 of 12)	24351	NM_001166659	624866	Mm.296317	NM_001037923	ENSMUSG00000074579	Lekr1	EG546798|EG624866|Gm6534	leucine, glutamate and lysine rich 1	protein-coding
common_peak1-17786-14-9-0.577288065470282-0.630231561310125	chr7	98172229	98172903	+	0	NA	Intergenic	Intergenic	-66730	NM_011807	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
common_peak2-26840-12-7-0.648775985087639-0.697979855752659	chr2	153270332	153270744	+	0	NA	promoter-TSS (NM_001001986)	promoter-TSS (NM_001001986)	-323	NM_001001986	329540	Mm.50600	NM_001001986	ENSMUSG00000061411	Nol4l	4931410H15|8430427H17Rik|AI429157|Gm1636	nucleolar protein 4-like	protein-coding
common_peak2-32197-36-47--0.105641414553402-0.310471923828336	chr9	119402005	119403045	+	0	NA	intron (NM_001253860, intron 22 of 26)	intron (NM_001253860, intron 22 of 26)	48484	NM_172456	208194	Mm.101578	NM_172456	ENSMUSG00000042787	Exog	AW557704|ENGL-B|ENGL-a|Endogl1|Endogl2|Engl|Engla|Englb	endo/exonuclease (5'-3'), endonuclease G-like	protein-coding
common_peak2-25493-15-28--0.845816244571916-1.02077663956385	chr19	5117450	5118540	+	0	NA	intron (NR_045528, intron 1 of 15)	CpG	413	NR_045528	16594	Mm.271648	NM_008451	ENSMUSG00000024862	Klc2	8030455F02Rik|AW212649|KLC 2|KLC-2	kinesin light chain 2	protein-coding
common_peak2-30934-67-85-0.118146728080897-0.379131714100395	chr8	4324426	4325878	+	0	NA	promoter-TSS (NM_010485)	promoter-TSS (NM_010485)	-52	NM_010485	15568	Mm.119162	NM_010485	ENSMUSG00000040028	Elavl1	2410055N02Rik|HUR|Hua|W91709	ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R)	protein-coding
common_peak2-31467-16-12-0.417823924126969-0.489164546851866	chr8	105880915	105881474	+	0	NA	Intergenic	MLT1A0|LTR|MaLR	-9760	NR_036588	69794	Mm.396139	NR_036588		1600027J07Rik	-	RIKEN cDNA 1600027J07 gene	ncRNA
unique_peak1-3225-22-9-1.32535601020004-2.00244947055753	chr18	60670137	60670976	+	0	NA	Intergenic	B1F2|SINE|Alu	-8919	NM_134133	106878	Mm.273197	NM_134133	ENSMUSG00000038059	Smim3	2010002N04Rik|AI195350|AW561905|Nid67|cI-41	small integral membrane protein 3	protein-coding
common_peak2-30888-11-35--1.6612314171907-3.15925062785482	chr7	141467890	141468703	+	0	NA	intron (NM_001081331, intron 5 of 7)	intron (NM_001081331, intron 5 of 7)	-51516	NM_007400	11489	Mm.439714	NM_007400	ENSMUSG00000054555	Adam12	Mltna|mKIAA4001	a disintegrin and metallopeptidase domain 12 (meltrin alpha)	protein-coding
common_peak1-8849-21-15-0.569489265266236-0.756118839439552	chr11	30954257	30954997	+	0	NA	intron (NM_023906, intron 3 of 9)	L1Md_F2|LINE|L1	-68262	NM_001290667	68044	Mm.32656	NM_026527	ENSMUSG00000020309	Chac2	-	ChaC, cation transport regulator 2	protein-coding
unique_peak1-4817-10-2-1.77145284428761-2.09384600808989	chr3	144538225	144538838	+	0	NA	Intergenic	Intergenic	20444	NM_001039222	622139	Mm.447150	NM_001039222	ENSMUSG00000074196	Gm6289	EG622139	predicted gene 6289	protein-coding
common_peak1-17813-20-34--0.641208232353773-0.863762398024911	chr7	101896591	101897534	+	0	NA	Intergenic	Intergenic	-1462085	NM_011858	23966	Mm.254610	NM_011858	ENSMUSG00000048078	Tenm4	Doc4|ELM2|Odz4|R75022|Ten-m4|l(7)-3Rn|l7Rn3|mKIAA1302	teneurin transmembrane protein 4	protein-coding
common_peak1-14608-48-68--0.137597305543355-0.342480376340174	chr3	52044056	52046193	+	0	NA	Intergenic	MMERGLN-int|LTR|ERV1	-27135	NM_019739	56458	Mm.29891	NM_019739	ENSMUSG00000044167	Foxo1	AI876417|Afxh|FKHR|Fkhr1|Foxo1a	forkhead box O1	protein-coding
common_peak1-16171-10-7-0.356415345008769-1.12966497611638	chr5	90223537	90223996	+	0	NA	intron (NM_177872, intron 3 of 21)	B4A|SINE|B4	88593	NM_177872	330119	Mm.133062	NM_177872	ENSMUSG00000043635	Adamts3	1100001H14Rik|6330442E02Rik	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 3	protein-coding
unique_peak1-4398-10-4-1.03448725012141-1.5150158574804	chr2	165858675	165859198	+	0	NA	intron (NM_008679, intron 1 of 22)	intron (NM_008679, intron 1 of 22)	40799	NM_008679	17979	Mm.469663	NM_008679	ENSMUSG00000027678	Ncoa3	2010305B15Rik|AW321064|Actr|Aib1|KAT13B|Rac3|Src3|Tram-1|Tram1|bHLHe42|p/Cip|pCip	nuclear receptor coactivator 3	protein-coding
common_peak2-29432-52-22-1.58469803420869-5.83587913882595	chr6	11907232	11908066	+	0	NA	intron (NM_001168382, intron 5 of 17)	L1_Mm|LINE|L1	31768	NM_001168382	75725	Mm.212411	NM_029404	ENSMUSG00000029629	Phf14	1110001C23Rik|4932409F11Rik|5730446A07Rik|AA623952|AV297001|mKIAA0783	PHD finger protein 14	protein-coding
unique_peak2-32462-7-11--0.785871670422967-1.21681515183528	chr1	16226917	16227557	+	0	NA	intron (NM_001111272, intron 11 of 12)	intron (NM_001111272, intron 11 of 12)	131274	NM_133832	98711	Mm.274376	NM_133832		Rdh10	3110069K09Rik|4921506A21Rik|AI875664|AW549993|D1Ertd762e|m366Asp	retinol dehydrogenase 10 (all-trans)	protein-coding
unique_peak2-35594-6-7--0.434601889619698-0.97990265578305	chr17	78401245	78401642	+	0	NA	Intergenic	Intergenic	-198145	NM_015800	50766	Mm.311912	NM_015800	ENSMUSG00000024074	Crim1	AU015004	cysteine rich transmembrane BMP regulator 1 (chordin like)	protein-coding
common_peak1-9227-13-8-0.608547029195456-0.660903317613904	chr11	84512892	84513585	+	0	NA	Intergenic	B1_Mm|SINE|Alu	20696	NR_046197	78471	Mm.47152	NR_046197	ENSMUSG00000085044	1700109G15Rik	-	RIKEN cDNA 1700109G15 gene	ncRNA
common_peak2-31925-5-7--0.704380336005853-1.01466476204226	chr9	62829722	62830052	+	0	NA	Intergenic	Intergenic	-1201	NM_019663	56469	Mm.431253	NM_019663	ENSMUSG00000032405	Pias1	2900068C24Rik|Ddxbp1|GBP	protein inhibitor of activated STAT 1	protein-coding
common_peak2-27965-23-51--0.978672213632011-2.09593985174545	chr4	41135554	41136569	+	0	NA	intron (NM_026275, intron 3 of 4)	intron (NM_026275, intron 3 of 4)	53007	NM_026275	67615	Mm.389540	NM_026275	ENSMUSG00000036241	Ube2r2	1200003M11Rik|Cdc34b|Ubc3b	ubiquitin-conjugating enzyme E2R 2	protein-coding
unique_peak1-4206-11-0-3.50869358425161-3.61235994796777	chr2	118884815	118885528	+	0	NA	intron (NM_029617, intron 3 of 23)	intron (NM_029617, intron 3 of 23)	12316	NM_029617	76464	Mm.202518	NM_029617	ENSMUSG00000027326	Casc5	2310043D08Rik|5730505K17Rik	cancer susceptibility candidate 5	protein-coding
unique_peak2-37403-13-49--1.86538415913696-4.77286552781164	chr4	141663463	141664730	+	0	NA	intron (NM_144531, intron 12 of 13)	intron (NM_144531, intron 12 of 13)	-23877	NM_145402	214359	Mm.27587	NM_145402	ENSMUSG00000040616	Tmem51	BC003277	transmembrane protein 51	protein-coding
common_peak2-22750-15-7-1.01216475055566-1.08658567012551	chr13	112660615	112661125	+	0	NA	Intergenic	Intergenic	-61679	NM_011945	26401	Mm.15918	NM_011945	ENSMUSG00000021754	Map3k1	MAPKKK1|MEKK1|Mekk	mitogen-activated protein kinase kinase kinase 1	protein-coding
common_peak2-29398-119-123-0.584241610743169-3.10986484513863	chr6	87850122	87851590	+	0	NA	intron (NM_017477, intron 13 of 23)	B3|SINE|B2	12890	NM_201244	54161	Mm.258785	NM_017477	ENSMUSG00000030058	Copg1	AU019265|BC056168|Copg|D6Ertd71e|D6Wsu16e	coatomer protein complex, subunit gamma 1	protein-coding
common_peak2-26061-32-75--0.968835494223925-2.81241087741094	chr2	35978659	35980132	+	0	NA	intron (NM_001159635, intron 3 of 5)	intron (NM_001159635, intron 3 of 5)	-12523	NM_026422	67871	Mm.378232	NM_026422	ENSMUSG00000026887	Mrrf	2400002D02Rik|MRFF|MTRRF|RRF	mitochondrial ribosome recycling factor	protein-coding
common_peak2-28346-9-8-0.0196884049619079-1.03275496310833	chr4	135661358	135661752	+	0	NA	Intergenic	B1_Mur3|SINE|Alu	-38182	NM_008321	15903	Mm.110	NM_008321		Id3	Hlh462|Idb3|bHLHb25	inhibitor of DNA binding 3	protein-coding
common_peak2-32290-34-62--0.595211396498651-1.14143720324845	chrX	36597749	36599095	+	0	NA	Intergenic	Intergenic	-101021	NM_001177380	78631	Mm.243738	NM_001177380	ENSMUSG00000079619	Cypt15	1700085A12Rik	cysteine-rich perinuclear theca 15	protein-coding
unique_peak2-39107-10-14--0.550475250599749-0.446472590016315	chr8	79559122	79559843	+	0	NA	intron (NM_001083906, intron 2 of 8)	MTEb|LTR|MaLR	133075	NM_001083906	110784	Mm.324393	NM_001083906	ENSMUSG00000031618	Nr3c2	MR|Mlr	nuclear receptor subfamily 3, group C, member 2	protein-coding
unique_peak1-5910-12-5-1.06381348436648-1.78669045979184	chr6	88841168	88841908	+	0	NA	intron (NM_008564, intron 6 of 15)	intron (NM_008564, intron 6 of 15)	7236	NM_008564	17216	Mm.16711	NM_008564	ENSMUSG00000002870	Mcm2	AA959861|AW476101|BM28|CDCL1|Mcmd2|mKIAA0030	minichromosome maintenance deficient 2 mitotin (S. cerevisiae)	protein-coding
unique_peak2-34017-6-8--0.60452689106201-1.03789460276074	chr12	105001278	105001749	+	0	NA	TTS (NM_009246)	TTS (NM_009246)	10330	NM_009246	20703	Mm.439695	NM_009246	ENSMUSG00000071177	Serpina1d	AI118301|Dom4|PI4|Spi1-4	serine (or cysteine) peptidase inhibitor, clade A, member 1D	protein-coding
common_peak1-9396-34-43--0.0773630916360313-0.30358472802154	chr11	100145050	100146680	+	0	NA	Intergenic	Intergenic	-14680	NM_212483	68239	Mm.158190	NM_212483	ENSMUSG00000053654	Krt42	2410039E07Rik|K17n|Ka22|ecat6	keratin 42	protein-coding
unique_peak1-190-6-1-1.5653981103803-1.56314192529759	chr1	77503710	77504189	+	0	NA	intron (NM_007936, intron 2 of 17)	intron (NM_007936, intron 2 of 17)	7714	NM_007936	13838	Mm.400747	NM_007936	ENSMUSG00000026235	Epha4	2900005C20Rik|AI385584|Cek8|Hek8|Sek|Sek1|Tyro1|rb	Eph receptor A4	protein-coding
common_peak1-18838-20-30--0.466121525795682-0.569352520859861	chr9	15237579	15238206	+	0	NA	Intergenic	ETnERV2-int|LTR|ERVK	-72047	NM_133214	170748	Mm.86572	NM_133214	ENSMUSG00000058173	Smco4	Fn5	single-pass membrane protein with coiled-coil domains 4	protein-coding
common_peak1-15014-19-14-0.495796731053168-0.607095980551316	chr3	116562849	116563756	+	0	NA	intron (NM_001113478, intron 1 of 16)	intron (NM_001113478, intron 1 of 16)	817	NM_001113478	20321	Mm.66293	NM_009146	ENSMUSG00000033386	Frrs1	AI131732|Sdfr2	ferric-chelate reductase 1	protein-coding
common_peak1-16501-13-9-0.456543935750406-0.53895475198017	chr5	139377632	139378326	+	0	NA	Intergenic	L1MD|LINE|L1	81945	NM_001195128	384244	Mm.485002	NM_001195128	ENSMUSG00000094504	Gm5294	EG384244	predicted gene 5294	protein-coding
common_peak2-29778-29-47--0.472672420106045-0.683734619884041	chr6	88518291	88519556	+	0	NA	intron (NM_001278671, intron 5 of 5)	MMETn-int|LTR|ERVK	-50129	NM_016906	53421	Mm.28375	NM_016906	ENSMUSG00000030082	Sec61a1	AA408394|AA410007|Sec61a	Sec61 alpha 1 subunit (S. cerevisiae)	protein-coding
common_peak2-30870-4-8--1.19338551529556-1.21878474469819	chr7	140035952	140036298	+	0	NA	intron (NM_028095, intron 3 of 5)	intron (NM_028095, intron 3 of 5)	8205	NM_028095	72096	Mm.28631	NM_028095	ENSMUSG00000030960	Mettl10	2010208K18Rik	methyltransferase like 10	protein-coding
common_peak2-29216-19-54--1.37867238686297-3.56455313593768	chr5	137425883	137426770	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-2819	NM_001163243	66437	Mm.25849	NM_025562	ENSMUSG00000019054	Fis1	2010003O14Rik|Ttc11	fission 1 (mitochondrial outer membrane) homolog (yeast)	protein-coding
unique_peak1-4478-28-6-2.24560419776386-4.76954767079794	chr3	51019021	51020057	+	0	NA	Intergenic	Intergenic	-8830	NM_009834	12457	Mm.86541	NM_009834	ENSMUSG00000023087	Ccrn4l	AU043840|Ccr4|nocturnin	CCR4 carbon catabolite repression 4-like (S. cerevisiae)	protein-coding
common_peak2-32433-5-8--0.874305337448166-1.10484139239135	chrX	169880380	169880685	+	0	NA	Intergenic	Intergenic	-3463683	NR_029457	654820	Mm.34441	NM_001039559	ENSMUSG00000072844	G530011O06Rik	-	RIKEN cDNA G530011O06 gene	ncRNA
common_peak2-31415-21-10-1.11005764662894-1.59083646988122	chr8	94262250	94262774	+	0	NA	Intergenic	Intergenic	63041	NM_001253822	16373	Mm.238044	NM_008393	ENSMUSG00000031734	Irx3	AI894186	Iroquois related homeobox 3	protein-coding
unique_peak2-35777-2-14--2.82434485187184-3.03832868024006	chr18	50031122	50031684	+	0	NA	exon (NM_001081371, exon 17 of 43)	exon (NM_001081371, exon 17 of 43)	38752	NM_001081371	240283	Mm.257790	NM_001081371	ENSMUSG00000037416	Dmxl1	C630007L23Rik|D030030C22	Dmx-like 1	protein-coding
common_peak2-28615-26-39--0.3940290027289-0.556669751231374	chr5	24684771	24685776	+	0	NA	Intergenic	B4A|SINE|B4	-2025	NM_026449	67909	Mm.141471	NM_026449	ENSMUSG00000028938	Galntl5	1700021B12Rik|Galnt15	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5	protein-coding
unique_peak1-7003-17-5-1.63333383748388-2.19184853030482	chr8	122556474	122557322	+	0	NA	intron (NM_030209, intron 12 of 14)	intron (NM_030209, intron 12 of 14)	40528	NM_030209	78892	Mm.264680	NM_030209	ENSMUSG00000031825	Crispld2	1810049K24Rik|Lcrisp2|Lgl1|coffeecrisp	cysteine-rich secretory protein LCCL domain containing 2	protein-coding
unique_peak2-36277-2-6--1.72480917832092-1.26211192963361	chr2	60861090	60861475	+	0	NA	Intergenic	Intergenic	-48074	NR_045335	100038493	Mm.388076	NR_045335	ENSMUSG00000075325	Gm13582	ENSMUSG00000075325|OTTMUSG00000012844	predicted gene 13582	ncRNA
common_peak1-12371-11-7-0.508693584251613-1.21681515183528	chr17	65657782	65658306	+	0	NA	intron (NM_001289485, intron 14 of 15)	B4A|SINE|B4	232078	NM_001008973	381107	Mm.141275	NM_001008973	ENSMUSG00000045036	Tmem232	E130009J12Rik|Gm940|Tes13-L|Tes13-S	transmembrane protein 232	protein-coding
common_peak2-26235-25-18-0.613922391901521-0.86528749982161	chr2	28525376	28525828	+	0	NA	intron (NM_001289575, intron 8 of 22)	B1F1|SINE|Alu	28849	NM_022887	64930	Mm.224354	NM_022887	ENSMUSG00000026812	Tsc1	-	tuberous sclerosis 1	protein-coding
common_peak2-30964-13-18--0.469455482805817-0.409888142029227	chr8	109608427	109609284	+	0	NA	intron (NR_104410, intron 3 of 10)	intron (NR_104410, intron 3 of 10)	11151	NR_106043	102465652		NR_106043		Mir7075	mmu-mir-7075	microRNA mir-7075	ncRNA
common_peak1-14916-6-8--0.60452689106201-1.03789460276074	chr3	98253964	98254413	+	0	NA	Intergenic	Intergenic	60207	NM_001111336	15495	Mm.14309	NM_008294	ENSMUSG00000095143	Hsd3b4	-	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 4	protein-coding
unique_peak2-36799-4-6--0.830815435910851-0.989110657569874	chr3	83299294	83299769	+	0	NA	Intergenic	Lx3_Mus|LINE|L1	78509	NR_036591	69460	Mm.389464	NR_036591		1700028M03Rik	-	RIKEN cDNA 1700028M03 gene	ncRNA
common_peak2-21228-7-12--0.901348887842903-1.31827279259406	chr11	63565897	63566390	+	0	NA	Intergenic	Intergenic	169643	NM_018805	54710	Mm.274426	NM_018805	ENSMUSG00000070407	Hs3st3b1	3-OST-3B|3OST3B1|3Ost3b|AU041882|AW536289|Hs3st3b|m3-OST-3B	heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1	protein-coding
common_peak2-30914-18-13-0.505564229170747-0.625923329873571	chr7	144678405	144679022	+	0	NA	Intergenic	MTE2a|LTR|MaLR	49356	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
common_peak1-18663-27-62--0.985733972604681-2.41691540483527	chr8	117157697	117158796	+	0	NA	intron (NM_019573, intron 5 of 8)	intron (NM_019573, intron 5 of 8)	194694	NM_019573	80707	Mm.440420	NM_019573	ENSMUSG00000004637	Wwox	5330426P09Rik|9030416C10Rik|WOX1	WW domain-containing oxidoreductase	protein-coding
unique_peak1-7033-11-2-1.92373108353046-2.32232533660526	chr8	126788419	126789168	+	0	NA	intron (NM_139272, intron 1 of 15)	intron (NM_139272, intron 1 of 15)	33499	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
common_peak2-31550-28-31-0.0529591198214625-0.314603908022751	chr8	111743400	111744441	+	0	NA	Intergenic	Intergenic	120888	NR_002928	384864	Mm.390083	NR_002928		Gm1943	-	WD repeat domain 70 pseudogene	pseudo
common_peak1-9104-21-52--1.15843118929696-2.59472032287453	chr11	70668798	70669620	+	0	NA	intron (NM_001291143, intron 2 of 18)	intron (NM_001291143, intron 2 of 18)	10946	NM_001291142	54189	Mm.7087	NM_019400	ENSMUSG00000020817	Rabep1	Rab5ep|rabaptin-5|rabaptin-5alpha	rabaptin, RAB GTPase binding effector protein 1	protein-coding
unique_peak1-1806-7-3-0.799090830298189-1.23214870625617	chr14	25520207	25520722	+	0	NA	Intergenic	Intergenic	210561	NM_011297	20088	Mm.16775	NM_011297	ENSMUSG00000025290	Rps24	-	ribosomal protein S24	protein-coding
unique_peak2-37541-4-5--0.608423014574403-0.909929411522249	chr5	30666385	30666796	+	0	NA	intron (NM_001033460, intron 15 of 16)	intron (NM_001033460, intron 15 of 16)	58676	NM_001033460	381738	Mm.389604	NM_001033460	ENSMUSG00000073102	Drc1	Ccdc164|Gm1060|b2b1654Clo	dynein regulatory complex subunit 1	protein-coding
common_peak1-19245-11-17--0.661231417190699-0.58239619684445	chr9	109059312	109059813	+	0	NA	intron (NM_177069, intron 3 of 9)	B1_Mur1|SINE|Alu	4974	NM_177069	320082	Mm.188028	NM_177069	ENSMUSG00000047237	Fbxw21	E330009P21Rik	F-box and WD-40 domain protein 21	protein-coding
common_peak2-26155-46-73--0.311457422380149-0.577394982162926	chr2	18027663	18028896	+	0	NA	intron (NR_045538, intron 4 of 22)	L1MB4|LINE|L1	42067	NM_001252561	17354	Mm.209175	NM_010804	ENSMUSG00000026743	Mllt10	Af10|B130021D15Rik|D630001B22Rik|mKIAA4140	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	protein-coding
unique_peak2-32503-2-5--1.50241675698448-1.08602067057793	chr1	50770964	50771357	+	0	NA	Intergenic	ORR1A3-int|LTR|MaLR	-213207	NM_019790	56363	Mm.245154	NM_019790	ENSMUSG00000026109	Tmeff2	4832418D20Rik|7630402F16Rik|TR-2	transmembrane protein with EGF-like and two follistatin-like domains 2	protein-coding
common_peak1-12170-17-43--1.24113528043226-2.37206698596504	chr17	29549743	29550317	+	0	NA	Intergenic	RSINE1|SINE|B4	52171	NM_001159538	26382	Mm.279187	NM_013710	ENSMUSG00000024013	Fgd2	Tcd-2|Tcd2|ZFYVE4|tcs-2|tcs2	FYVE, RhoGEF and PH domain containing 2	protein-coding
unique_peak1-1220-17-6-1.41094141614743-1.84350559086818	chr11	107027438	107028274	+	0	NA	TTS (NM_133702)	TTS (NM_133702)	22839	NM_133702	68979	Mm.294617	NM_133702	ENSMUSG00000018433	Nol11	1500002M01Rik|AU015220|AU019874	nucleolar protein 11	protein-coding
unique_peak2-32608-12-22--0.874785970969374-0.809260849721102	chr1	93685404	93686526	+	0	NA	Intergenic	Intergenic	-12089	NM_007855	13345	Mm.9474	NM_007855	ENSMUSG00000007805	Twist2	Dermo1|bHLHa39	twist basic helix-loop-helix transcription factor 2	protein-coding
common_peak2-25988-20-17-0.318149783148881-0.440610794044987	chr19	54982993	54983663	+	0	NA	Intergenic	B4A|SINE|B4	190609	NM_008149	14732	Mm.210196	NM_008149	ENSMUSG00000024978	Gpam	GPAT|GPAT1	glycerol-3-phosphate acyltransferase, mitochondrial	protein-coding
common_peak1-15220-110-71-1.23207275893633-9.24972678299916	chr4	137640980	137644596	+	0	NA	intron (NM_001256198, intron 5 of 32)	intron (NM_001256198, intron 5 of 32)	-76336	NR_105825	102466907		NR_105825		Mir6399	mmu-mir-6399	microRNA mir-6399	ncRNA
unique_peak2-33590-9-13--0.617741515653384-0.459837087125828	chr11	87737590	87738181	+	0	NA	Intergenic	Intergenic	-9380	NM_146412	258407	Mm.271337	NM_146412	ENSMUSG00000060787	Olfr464	MOR240-2	olfactory receptor 464	protein-coding
unique_peak1-5962-24-2-3.20824740204656-6.14077709290365	chr6	93284939	93285955	+	0	NA	Intergenic	Intergenic	394871	NR_015530	330385	Mm.483472	NR_015530	ENSMUSG00000097462	9530026P05Rik	B430306B02	RIKEN cDNA 9530026P05 gene	ncRNA
unique_peak2-33094-3-4--0.73591118484664-0.864171920961574	chr10	80270683	80271037	+	0	NA	TTS (NM_028001)	TTS (NM_028001)	2867	NM_007445	11705	Mm.376094	NM_007445	ENSMUSG00000035262	Amh	MIS	anti-Mullerian hormone	protein-coding
common_peak2-25721-98-116-0.331403973847146-1.09633196078903	chr19	23141093	23142860	+	0	NA	Intergenic	ID4|SINE|ID	-73740	NM_010638	16601	Mm.291595	NM_010638	ENSMUSG00000033863	Klf9	2310051E17Rik|AA589643|BTEB-1|Bteb1|ENSMUSG00000055440|Gm9971	Kruppel-like factor 9	protein-coding
unique_peak2-39170-2-5--1.50241675698448-1.08602067057793	chr8	94602944	94603271	+	0	NA	Intergenic	Lx9|LINE|L1	276912	NR_110452	71296	Mm.86664	NR_033641	ENSMUSG00000031736	Crnde	4933436C20Rik	colorectal neoplasia differentially expressed (non-protein coding)	ncRNA
common_peak1-11427-9-23--1.39534909431694-1.67711336403294	chr15	99725758	99726219	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-20101	NM_001113545	65970	Mm.33207	NM_023063	ENSMUSG00000023022	Lima1	Eplin	LIM domain and actin binding 1	protein-coding
common_peak2-28680-18-16-0.225456309978012-0.397739447719379	chr5	32350018	32350998	+	0	NA	intron (NM_181281, intron 9 of 10)	L1_Mus1|LINE|L1	-88337	NM_008037	14284	Mm.24684	NM_008037	ENSMUSG00000029135	Fosl2	Fra-2	fos-like antigen 2	protein-coding
common_peak2-31172-9-7-0.18961340640422-1.05908390183068	chr8	46216774	46217166	+	0	NA	Intergenic	Intergenic	33529	NR_040690	622523	Mm.390032	NR_040690		Gm6329	EG622523	predicted gene 6329	ncRNA
common_peak1-19244-11-15--0.491306415748387-0.435191258261915	chr9	109038389	109038998	+	0	NA	Intergenic	RMER16-int|LTR|ERVK	25843	NM_177069	320082	Mm.188028	NM_177069	ENSMUSG00000047237	Fbxw21	E330009P21Rik	F-box and WD-40 domain protein 21	protein-coding
common_peak2-23359-7-7--0.200909169701811-0.97990265578305	chr15	44457360	44457832	+	0	NA	intron (NM_019480, intron 2 of 6)	PB1D9|SINE|Alu	6409	NM_019480	55960	Mm.287896	NM_019480	ENSMUSG00000022339	Ebag9	AI835379|Rcas1	estrogen receptor-binding fragment-associated gene 9	protein-coding
unique_peak1-3810-21-6-1.76213434320863-2.81226952737395	chr2	124911024	124911845	+	0	NA	TTS (NM_001162417)	TTS (NM_001162417)	17571	NM_175034	317750	Mm.330538	NM_175034	ENSMUSG00000035183	Slc24a5	F630045L20Rik|JSX|NCKX5|NCX5|Oca6	solute carrier family 24, member 5	protein-coding
common_peak2-21575-28-14-1.14606852421294-2.01759298435799	chr11	97699832	97700726	+	0	NA	TTS (NM_010688)	TTS (NM_010688)	-1815	NM_001080935	68127	Mm.110270	NM_001080935	ENSMUSG00000089676	B230217C12Rik	AI840637	RIKEN cDNA B230217C12 gene	protein-coding
unique_peak1-6826-9-4-0.867685311516858-1.36011389749466	chr8	79079937	79080508	+	0	NA	Intergenic	B4A|SINE|B4	343850	NR_028579	100039211	Mm.367571	NR_028579	ENSMUSG00000074235	Gm10649	ENSMUSG00000074235	predicted gene 10649	ncRNA
common_peak2-25181-5-6--0.511735258063458-0.947717972411649	chr18	56708447	56708841	+	0	NA	intron (NM_138600, intron 5 of 17)	intron (NM_138600, intron 5 of 17)	10851	NR_106160	102465790		NR_106160	miRBase:MI0025040	Mir1258	mmu-mir-1258	microRNA mir-1258	ncRNA
common_peak2-20181-30-35--0.000249591950439054-0.304088508634279	chr1	172147881	172148922	+	0	NA	Intergenic	Intergenic	-2877	NM_010633	16589	Mm.209150	NM_010633		Uhmk1	4732477C12Rik|4930500M09Rik|AA673513|AI449218|AU021979|KIS|Kist|P-CIP2	U2AF homology motif (UHM) kinase 1	protein-coding
unique_peak2-33502-3-7--1.41398308995928-1.23214870625617	chr11	72953522	72953919	+	0	NA	intron (NM_008399, intron 28 of 30)	intron (NM_008399, intron 28 of 30)	-1924	NM_010353	14841	Mm.42045	NM_010353	ENSMUSG00000050107	Gsg2	Haspin	germ cell-specific gene 2	protein-coding
common_peak2-28910-18-17-0.142994149786039-0.353907621462753	chr5	92282561	92283386	+	0	NA	Intergenic	Intergenic	-86647	NR_045383	73452	Mm.396233	NR_045383		1700063O14Rik	-	RIKEN cDNA 1700063O14 gene	ncRNA
unique_peak2-39102-4-10--1.48289213249054-1.5150158574804	chr8	78798157	78798694	+	0	NA	Intergenic	Intergenic	625647	NR_028579	100039211	Mm.367571	NR_028579	ENSMUSG00000074235	Gm10649	ENSMUSG00000074235	predicted gene 10649	ncRNA
unique_peak1-3860-10-2-1.77145284428761-2.09384600808989	chr2	6938456	6938971	+	0	NA	intron (NM_001110231, intron 3 of 15)	intron (NM_001110231, intron 3 of 15)	63635	NM_001110230	14007	Mm.398543	NM_010160	ENSMUSG00000002107	Celf2	B230218O03|B230345P09Rik|C88023|CELF-2|CUG-BP2|Cugbp2|D230046B21Rik|Etr-3|Napor|Napor-2|mETR-3	CUGBP, Elav-like family member 2	protein-coding
common_peak1-10577-25-18-0.613922391901521-0.86528749982161	chr14	25824867	25826126	+	0	NA	Intergenic	Intergenic	137231	NR_045718	75862	Mm.109191	NR_045718		4930572O13Rik	-	RIKEN cDNA 4930572O13 gene	ncRNA
unique_peak2-39030-4-27--2.83081543591085-4.45580894998946	chr8	64692531	64693094	+	0	NA	Intergenic	Intergenic	-90822	NM_011922	26359	Mm.42179	NM_011922	ENSMUSG00000031635	Anxa10	-	annexin A10	protein-coding
common_peak2-24662-3-5--0.998945590680433-0.96108193396963	chr17	35969586	35969840	+	0	NA	TTS (NM_008027)	TTS (NM_008027)	5533	NM_011655	22154	Mm.273538	NM_011655	ENSMUSG00000001525	Tubb5	AA408537|AI596182|B130022C14Rik|M(beta)5	tubulin, beta 5 class I	protein-coding
common_peak2-28505-17-42--1.20796841649706-2.23152841032562	chr5	24444440	24445364	+	0	NA	intron (NM_145401, intron 4 of 15)	intron (NM_145401, intron 4 of 15)	-30575	NM_001170556	108099	Mm.33649	NM_145401	ENSMUSG00000028944	Prkag2	2410051C13Rik|AAKG|AAKG2|AI854673|H91620p|WPWS	protein kinase, AMP-activated, gamma 2 non-catalytic subunit	protein-coding
common_peak2-19563-13-18--0.469455482805817-0.409888142029227	chr1	9797787	9798677	+	0	NA	intron (NM_177547, intron 1 of 16)	intron (NM_177547, intron 1 of 16)	10021	NM_177547	170755	Mm.336410	NM_133220	ENSMUSG00000025915	Sgk3	2510015P22Rik|A330005P07Rik|Cisk|fy|fz	serum/glucocorticoid regulated kinase 3	protein-coding
unique_peak1-6355-9-5-0.604650905683064-1.21398586181642	chr7	65466115	65466600	+	0	NA	Intergenic	Intergenic	-447215	NM_009728	11982	Mm.135129	NM_009728	ENSMUSG00000025324	Atp10a	Atp10c|pfatp	ATPase, class V, type 10A	protein-coding
common_peak2-22520-67-94--0.0254441255479527-0.302191216390766	chr13	54686660	54688451	+	0	NA	intron (NM_178605, intron 3 of 4)	intron (NM_178605, intron 3 of 4)	3880	NM_178605	28126	Mm.439993	NM_178605	ENSMUSG00000025869	Nop16	AA409471|D13Wsu177e	NOP16 nucleolar protein	protein-coding
unique_peak1-5114-13-5-1.19350952991661-1.95509489018123	chr4	156100617	156101282	+	0	NA	Intergenic	Intergenic	-491983	NM_198305	231003	Mm.423038	NM_198305	ENSMUSG00000078484	Klhl17	AL022703|BC058738	kelch-like 17	protein-coding
unique_peak2-37402-13-12-0.0780323124966764-0.334470287753051	chr4	141574766	141575553	+	0	NA	Intergenic	Intergenic	-7593	NM_177868	329977	Mm.252019	NM_028429	ENSMUSG00000051435	Fhad1	2900090M10Rik|B230311F11	forkhead-associated (FHA) phosphopeptide binding domain 1	protein-coding
unique_peak1-4701-8-2-1.42025991722641-1.65811743852845	chr3	101068586	101069051	+	0	NA	Intergenic	L1MC1|LINE|L1	23044	NM_013486	12481	Mm.22842	NM_013486	ENSMUSG00000027863	Cd2	LFA-2|Ly-37|Ly37	CD2 antigen	protein-coding
common_peak1-8410-8-11--0.579740082773585-1.14218153353838	chr10	70094748	70095262	+	0	NA	intron (NR_045291, intron 1 of 5)	intron (NR_045291, intron 1 of 5)	19668	NR_045291	319646	Mm.483039	NR_045291	ENSMUSG00000037747	D630013N20Rik	-	RIKEN cDNA D630013N20 gene	ncRNA
unique_peak1-6114-17-4-1.89636824331768-2.60953805094651	chr6	128275835	128276639	+	0	NA	intron (NM_011657, intron 7 of 10)	PB1D9|SINE|Alu	-25406	NM_011567	21679	Mm.14774	NM_011567	ENSMUSG00000030353	Tead4	ETFR-2|Etfr2|FR-19|Rtef1|TEAD-4|TEF-3|Tcf13r1|Tef3|Tefr|Tefr1|Tefr1a	TEA domain family member 4	protein-coding
common_peak2-30799-7-11--0.785871670422967-1.21681515183528	chr7	127421817	127422118	+	0	NA	intron (NM_026458, intron 20 of 30)	intron (NM_026458, intron 20 of 30)	-50231	NM_177213	320631	Mm.78330	NM_177213	ENSMUSG00000054746	Abca15	4930500I12Rik	ATP-binding cassette, sub-family A (ABC1), member 15	protein-coding
common_peak2-19546-35-31-0.431370258462504-0.725458513490992	chr1	166378875	166379892	+	0	NA	intron (NM_009721, intron 2 of 5)	intron (NM_009721, intron 2 of 5)	9103	NM_009721	11931	Mm.4550	NM_009721	ENSMUSG00000026576	Atp1b1	Atp4b|Atpb|Atpb-1|NKbeta1	ATPase, Na+/K+ transporting, beta 1 polypeptide	protein-coding
common_peak2-20884-23-39--0.600160590378282-0.869438253311888	chr11	3265755	3267146	+	0	NA	intron (NM_010718, intron 2 of 15)	intron (NM_010718, intron 2 of 15)	4945	NM_173053	16886	Mm.124176	NM_010718	ENSMUSG00000020451	Limk2	Limk-2	LIM motif-containing protein kinase 2	protein-coding
common_peak1-12303-18-9-0.990991056340989-1.23014042908325	chr17	46772491	46773251	+	0	NA	intron (NM_029091, intron 10 of 15)	intron (NM_029091, intron 10 of 15)	-6418	NM_175168	71461	Mm.181833	NM_175168	ENSMUSG00000023972	Ptk7	8430404F20Rik|chz|mPTK7/CCK4	PTK7 protein tyrosine kinase 7	protein-coding
unique_peak1-7189-8-4-0.683294323060208-1.21878474469819	chr9	63657305	63657798	+	0	NA	Intergenic	Intergenic	-51750	NM_016769	17127	Mm.7320	NM_016769	ENSMUSG00000032402	Smad3	AU022421|Madh3	SMAD family member 3	protein-coding
common_peak1-18197-37-27-0.718638149428215-1.38733277998641	chr8	22491578	22492834	+	0	NA	Intergenic	L1VL1|LINE|L1	-25507	NM_007844	13218	Mm.304264	NM_007844	ENSMUSG00000074437	Defa-rs1	2010300L12Rik|2010319H24Rik|CRS1C|CRS1C-2|CRS1C-5|Defcr-rs1	defensin, alpha, related sequence 1	protein-coding
common_peak1-18895-13-18--0.469455482805817-0.409888142029227	chr9	36767979	36768583	+	0	NA	intron (NM_148950, intron 3 of 11)	intron (NM_148950, intron 3 of 11)	117037	NM_183171	235180	Mm.5264	NM_183171	ENSMUSG00000032118	Fez1	UNC-76|UNC76	fasciculation and elongation protein zeta 1 (zygin I)	protein-coding
unique_peak2-38196-5-12--1.40482005414695-1.62698961692433	chr6	108442545	108443142	+	0	NA	intron (NM_010585, intron 51 of 61)	intron (NM_010585, intron 51 of 61)	3106	NR_106121	102465766		NR_106121		Mir7661	mmu-mir-7661	microRNA mir-7661	ncRNA
unique_peak2-37503-0-5--3.42509343119537-1.32905871926422	chr5	8739008	8739297	+	0	NA	intron (NM_011076, intron 25 of 27)	intron (NM_011076, intron 25 of 27)	-58995	NM_011075	18669	Mm.146649	NM_011075	ENSMUSG00000028970	Abcb1b	Abcb1|Mdr1|Mdr1b|Pgy-1|Pgy1|mdr	ATP-binding cassette, sub-family B (MDR/TAP), member 1B	protein-coding
unique_peak1-7251-14-2-2.31425365963649-3.28500101358144	chr9	78479626	78480096	+	0	NA	intron (NM_153098, intron 2 of 32)	intron (NM_153098, intron 2 of 32)	16508	NM_153098	235505	Mm.32955	NM_153098	ENSMUSG00000046186	Cd109	9930012E15Rik|AI480638|GARP	CD109 antigen	protein-coding
common_peak1-18896-30-19-0.84774731460451-1.46094028072561	chr9	36796658	36797360	+	0	NA	intron (NM_001029838, intron 2 of 12)	B2_Mm2|SINE|B2	145765	NM_183171	235180	Mm.5264	NM_183171	ENSMUSG00000032118	Fez1	UNC-76|UNC76	fasciculation and elongation protein zeta 1 (zygin I)	protein-coding
common_peak1-18764-37-16-1.43853023023548-3.58938495778628	chr8	126823925	126825476	+	0	NA	intron (NM_139272, intron 2 of 15)	intron (NM_139272, intron 2 of 15)	69406	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
unique_peak1-3907-11-2-1.92373108353046-2.32232533660526	chr2	24318275	24318727	+	0	NA	intron (NM_011040, intron 2 of 11)	intron (NM_011040, intron 2 of 11)	12618	NM_011040	18510	Mm.2533	NM_011040	ENSMUSG00000026976	Pax8	Pax-8	paired box 8	protein-coding
common_peak2-31671-10-6-0.549060422951165-1.21398586181642	chr8	126825504	126825979	+	0	NA	intron (NM_139272, intron 2 of 15)	intron (NM_139272, intron 2 of 15)	70447	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
common_peak1-16115-7-5-0.214128329577033-1.01466476204226	chr5	66041499	66041957	+	0	NA	exon (NM_001081321, exon 13 of 32)	exon (NM_001081321, exon 13 of 32)	47367	NM_001081321	71521	Mm.278974	NM_027818	ENSMUSG00000029202	Pds5a	9030416H16Rik|E230024D05Rik|mKIAA0648	PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	protein-coding
common_peak1-19476-8-8--0.164702583494742-1.00793137938329	chrX	135742003	135742503	+	0	NA	Intergenic	Intergenic	-2330	NM_175541	245631	Mm.131001	NM_175541	ENSMUSG00000042515	Mum1l1	9430086K21Rik	melanoma associated antigen (mutated) 1-like 1	protein-coding
common_peak2-20649-38-64--0.450915153729924-0.799068699966534	chr10	81626838	81628604	+	0	NA	Intergenic	Intergenic	36963	NM_001163064	216177	Mm.482395	NM_001163064		AU041133	-	expressed sequence AU041133	protein-coding
common_peak2-28128-18-52--1.41500130333485-3.50002372270847	chr4	95051322	95052140	+	0	NA	Intergenic	Intergenic	-172467	NM_001113412	75578	Mm.276098	NM_029347	ENSMUSG00000028573	Fggy	2310009E04Rik	FGGY carbohydrate kinase domain containing	protein-coding
common_peak2-22519-37-59--0.3808975241227-0.651432082277441	chr13	54621560	54622409	+	0	NA	intron (NM_176987, intron 1 of 9)	(CAAA)n|Simple_repeat|Simple_repeat	16818	NM_176987	319719	Mm.376151	NM_176987	ENSMUSG00000043183	Simc1	4732471D19Rik	SUMO-interacting motifs containing 1	protein-coding
common_peak1-16662-13-9-0.456543935750406-0.53895475198017	chr6	131382530	131383307	+	0	NA	Intergenic	Intergenic	-44450	NM_011733	56449	Mm.458000	NM_011733	ENSMUSG00000030189	Ybx3	Csda|Dpba|MSY3|MSY4|Yb2|dbpA|oxyR	Y box protein 3	protein-coding
common_peak1-16251-26-7-1.92789909215846-3.64499996644214	chr5	104859591	104860730	+	0	NA	Intergenic	Intergenic	-3970	NM_001204202	20750	Mm.288474	NM_009263	ENSMUSG00000029304	Spp1	2AR|Apl-1|BNSP|BSPI|Bsp|ETA-1|Eta|OP|Opn|Opnl|Ric|Spp-1	secreted phosphoprotein 1	protein-coding
common_peak1-17699-13-14--0.12841856497075-0.301029995663977	chr7	73558851	73559515	+	0	NA	intron (NM_053080, intron 3 of 12)	B4A|SINE|B4	13180	NM_053080	56847	Mm.140988	NM_053080	ENSMUSG00000015134	Aldh1a3	ALDH6|RALDH3|V1	aldehyde dehydrogenase family 1, subfamily A3	protein-coding
common_peak1-8652-26-17-0.75797409071615-1.09210977391291	chr10	127310874	127311950	+	0	NA	intron (NM_145424, intron 1 of 3)	RLTR47_MM|LTR|ERV1	7880	NM_145424	216454	Mm.214923	NM_145424	ENSMUSG00000074639	BC089597	CRAD-L	cDNA sequence BC089597	protein-coding
common_peak1-16547-21-37--0.67843824817735-0.907273387067392	chr5	144100234	144101137	+	0	NA	Intergenic	ID_B1|SINE|B4	9698	NR_027874	67672	Mm.30983	NR_027874	ENSMUSG00000089889	0610040B10Rik	-	RIKEN cDNA 0610040B10 gene	ncRNA
common_peak1-19254-53-58-0.258329963054087-0.585993193419137	chr9	110532483	110533692	+	0	NA	intron (NM_183276, intron 35 of 53)	intron (NM_183276, intron 35 of 53)	5532	NR_106186	102466885		NR_106186		Mir8107	mmu-mir-8107	microRNA mir-8107	ncRNA
common_peak1-16434-57-58-0.383389990717087-0.883630128407083	chr5	134638414	134640154	+	0	NA	intron (NM_033572, intron 7 of 10)	intron (NM_033572, intron 7 of 10)	13353	NM_033572	94254	Mm.29508	NM_033572	ENSMUSG00000061979	Wbscr16	5730496C04Rik|AU019812	Williams-Beuren syndrome chromosome region 16 homolog (human)	protein-coding
common_peak1-19448-12-15--0.351224014912361-0.332077462497413	chrX	100774312	100774994	+	0	NA	intron (NR_028380, intron 10 of 10)	intron (NR_028380, intron 10 of 10)	-6160	NR_030418	751546		NR_030418	miRBase:MI0004125	Mir374b	Mir374|Mirn374|mmu-mir-374|mmu-mir-374b	microRNA 374b	ncRNA
common_peak2-31855-12-18--0.599151528355947-0.476916024233333	chr9	50528258	50528812	+	0	NA	intron (NM_178118, intron 1 of 19)	intron (NM_178118, intron 1 of 19)	7554	NM_178118	330938	Mm.82598	NM_178118	ENSMUSG00000032064	Dixdc1	4930563F16Rik|BC048182|Ccd1|Ccd1Aalpha1L|Ccd1Abeta1L|Ccd1BalphaL|Ccd1BbetaL|Ccd1CL|mKIAA1735	DIX domain containing 1	protein-coding
unique_peak1-41-7-1-1.79909083029819-1.80617997398389	chr1	20836434	20836955	+	0	NA	Intergenic	Intergenic	-26400	NM_008563	17215	Mm.4502	NM_008563	ENSMUSG00000041859	Mcm3	AL033361|C80350|Mcmd|P1|p1.m	minichromosome maintenance deficient 3 (S. cerevisiae)	protein-coding
common_peak2-27811-20-11-0.903112283870037-1.11267835143409	chr3	144668876	144669576	+	0	NA	intron (NM_017474, intron 12 of 13)	intron (NM_017474, intron 12 of 13)	26514	NM_017474	23844	Mm.33483	NM_017474	ENSMUSG00000028255	Clca3	Clca1|Clca2|gob-5|gob5	chloride channel calcium activated 3	protein-coding
common_peak1-12674-9-13--0.617741515653384-0.459837087125828	chr18	36782561	36783097	+	0	NA	intron (NM_175375, intron 14 of 33)	intron (NM_175375, intron 14 of 33)	-40885	NM_201256	108112	Mm.24790	NM_201256		Eif4ebp3	4e-bp3	eukaryotic translation initiation factor 4E binding protein 3	protein-coding
common_peak2-29759-40-70--0.490771436753584-0.951571444707976	chr6	86849066	86850398	+	0	NA	intron (NM_001040106, intron 1 of 20)	intron (NM_001040106, intron 1 of 20)	50221	NM_001040106	269774	Mm.221038	NM_177762	ENSMUSG00000057230	Aak1	5530400K14Rik|9630042K20|AU067724|AU067726|BC028270|C79663|D6Ertd245e|R75501|mKIAA1048	AP2 associated kinase 1	protein-coding
common_peak1-15898-11-9-0.186765489364251-0.344532117358383	chr5	17571173	17571819	+	0	NA	Intergenic	L1_Mur2|LINE|L1	103108	NM_001081143	242851	Mm.332230	NM_001081143	ENSMUSG00000028777	Gnat3	Ggust|Gtn	guanine nucleotide binding protein, alpha transducing 3	protein-coding
common_peak2-32319-13-33--1.30899081061257-2.01759298435799	chrX	71556094	71557105	+	0	NA	3' UTR (NM_010273, exon 11 of 11)	3' UTR (NM_010273, exon 11 of 11)	-1773	NM_138607	108160	Mm.4370	NM_138607	ENSMUSG00000001962	Fam50a	D0HXS9928E|XAP-5	family with sequence similarity 50, member A	protein-coding
unique_peak2-35754-3-5--0.998945590680433-0.96108193396963	chr18	38866930	38867202	+	0	NA	Intergenic	Intergenic	-106144	NM_011898	24066	Mm.42038	NM_011898	ENSMUSG00000024427	Spry4	A030006O18Rik|sprouty4	sprouty homolog 4 (Drosophila)	protein-coding
common_peak1-18708-37-78--0.777787676691284-2.11469976509036	chr8	122550275	122551884	+	0	NA	intron (NM_030209, intron 8 of 14)	intron (NM_030209, intron 8 of 14)	34709	NM_030209	78892	Mm.264680	NM_030209	ENSMUSG00000031825	Crispld2	1810049K24Rik|Lcrisp2|Lgl1|coffeecrisp	cysteine-rich secretory protein LCCL domain containing 2	protein-coding
common_peak2-30469-14-20--0.493101262421116-0.456667090758524	chr7	47030465	47031485	+	0	NA	Intergenic	Intergenic	257839	NM_001004139	70227	Mm.333800	NM_001004139	ENSMUSG00000068959	Zfp619	3000002G13Rik	zinc finger protein 619	protein-coding
common_peak1-10364-35-77--0.854031960399745-2.42180937783011	chr13	91460095	91460765	+	0	NA	Intergenic	Lx8|LINE|L1	67260	NR_045161	320297	Mm.375866	NR_045161	ENSMUSG00000097182	A830009L08Rik	-	RIKEN cDNA A830009L08 gene	ncRNA
unique_peak2-37722-8-7-0.00522241794757061-1.00793137938329	chr5	105800819	105801204	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-25520	NM_001039647	634650	Mm.458435	NM_001039647	ENSMUSG00000092021	Gbp11	EG634650|Gm7141	guanylate binding protein 11	protein-coding
common_peak2-23466-24-19-0.471281807880354-0.677583764578261	chr15	72929347	72930018	+	0	NA	Intergenic	Intergenic	8840	NM_053068	93696	Mm.23095	NM_053068	ENSMUSG00000068391	Chrac1	2410152E03Rik|2810406L04Rik|YCL1	chromatin accessibility complex 1	protein-coding
unique_peak1-5599-12-5-1.06381348436648-1.78669045979184	chr6	56901405	56901957	+	0	NA	Intergenic	Intergenic	-4826	NM_134176	171194	Mm.222754	NM_134176	ENSMUSG00000071893	Vmn1r4	C230065D10Rik|V1rc21	vomeronasal 1 receptor 4	protein-coding
common_peak2-21157-10-7-0.356415345008769-1.12966497611638	chr11	58214723	58215152	+	0	NA	Intergenic	Intergenic	-19676	NM_027239	69864	Mm.45641	NM_027239	ENSMUSG00000013653	1810065E05Rik	AV047390	RIKEN cDNA 1810065E05 gene	protein-coding
common_peak2-24209-96-138-0.0471101416318209-0.328753011933461	chr16	76371897	76373831	+	0	NA	intron (NM_173440, intron 1 of 3)	CpG	430	NM_173440	268903	Mm.74711	NM_173440	ENSMUSG00000048490	Nrip1	6030458L20Rik|8430438I05Rik|9630050P12|AA959574|AW456757|RIP140	nuclear receptor interacting protein 1	protein-coding
common_peak1-16223-16-32--0.926130477090392-1.31432283146954	chr5	100038303	100039072	+	0	NA	intron (NR_030692, intron 1 of 3)	intron (NR_030692, intron 1 of 3)	119392	NR_030692	319818	Mm.295233	NR_030692	ENSMUSG00000089809	A930011G23Rik	-	RIKEN cDNA A930011G23 gene	ncRNA
unique_peak2-34303-9-7-0.18961340640422-1.05908390183068	chr13	85189428	85189889	+	0	NA	Intergenic	ORR1B1|LTR|MaLR	-139424	NM_023243	66671	Mm.18474	NM_023243	ENSMUSG00000021548	Ccnh	6330408H09Rik|AI661354|AV102684|AW538719	cyclin H	protein-coding
unique_peak1-6737-15-1-3.01216475055566-4.18809100057339	chr8	46228744	46229561	+	0	NA	Intergenic	MurERV4_19-int|LTR|ERVK	21347	NR_040690	622523	Mm.390032	NR_040690		Gm6329	EG622523	predicted gene 6329	ncRNA
common_peak2-28254-15-12-0.311725032414564-0.425539671739611	chr4	126103999	126104530	+	0	NA	intron (NM_153402, intron 1 of 18)	B3|SINE|B2	2522	NM_153402	214150	Mm.440915	NM_153402		Ago3	AW048688|C130014L07Rik|Eif2c3	argonaute RISC catalytic subunit 3	protein-coding
unique_peak2-33586-4-6--0.830815435910851-0.989110657569874	chr11	87108280	87108613	+	0	NA	intron (NM_177167, intron 1 of 6)	B1_Mus1|SINE|Alu	64050	NM_177167	320472	Mm.341988	NM_177167	ENSMUSG00000046442	Ppm1e	AW049266|B930008A12Rik|POPX1|PP2CH|mKIAA1072	protein phosphatase 1E (PP2C domain containing)	protein-coding
unique_peak2-36205-8-7-0.00522241794757061-1.00793137938329	chr2	32879671	32880096	+	0	NA	intron (NM_178888, intron 12 of 28)	intron (NM_178888, intron 12 of 28)	-42307	NM_019488	56017	Mm.305754	NM_019488	ENSMUSG00000026791	Slc2a8	D2Ertd44e|GLUT8|GlutX1	solute carrier family 2, (facilitated glucose transporter), member 8	protein-coding
common_peak1-10022-39-17-1.44583624547684-3.81634954855125	chr13	9013814	9015087	+	0	NA	Intergenic	B3|SINE|B2	-19192	NM_027000	69237	Mm.41800	NM_027000	ENSMUSG00000021149	Gtpbp4	2610028C09Rik|Crfg|Gtpbp3|NGB|Nog1	GTP binding protein 4	protein-coding
common_peak2-26453-15-14-0.105274154947137-0.330004445983672	chr2	72286907	72287669	+	0	NA	Intergenic	Intergenic	-26988	NM_025866	66953	Mm.270676	NM_025866	ENSMUSG00000055612	Cdca7	2310021G01Rik|AU044109|JPO1	cell division cycle associated 7	protein-coding
common_peak2-26214-32-35-0.109167017777348-0.348003640999429	chr2	26444762	26445299	+	0	NA	intron (NM_178444, intron 4 of 9)	intron (NM_178444, intron 4 of 9)	-1847	NR_029541	387145		NR_029541		Mir126a	Mir126|Mirn126|mmu-mir-126|mmu-mir-126a	microRNA 126a	ncRNA
common_peak1-15903-28-96--1.54695372236567-7.27682519548328	chr5	21054814	21056033	+	0	NA	intron (NM_177076, intron 11 of 19)	intron (NM_177076, intron 11 of 19)	6078	NM_028977	74511	Mm.439963	NM_028977	ENSMUSG00000039883	Lrrc17	37kDa|4833425M04Rik|6130400C22Rik|P37nb	leucine rich repeat containing 17	protein-coding
common_peak2-23571-81-145--0.317774955871452-0.95205668222601	chr15	79440773	79442643	+	0	NA	3' UTR (NM_029407, exon 18 of 18)	3' UTR (NM_029407, exon 18 of 18)	-6169	NM_010059	13404	Mm.2524	NM_010059	ENSMUSG00000022429	Dmc1	Dmc1h|Lim15|Mei11|sgdp	DMC1 dosage suppressor of mck1 homolog, meiosis-specific homologous recombination	protein-coding
common_peak1-13312-16-13-0.310908720210457-0.417187467413082	chr19	41911942	41912631	+	0	NA	Intergenic	Intergenic	7826	NM_008043	14296	Mm.4573	NM_008043		Frat1	AW060382	frequently rearranged in advanced T cell lymphomas	protein-coding
common_peak2-29757-12-18--0.599151528355947-0.476916024233333	chr6	86793148	86793744	+	0	NA	Intergenic	RMER5|LTR|ERV1	5988	NR_028298	67170	Mm.119489	NR_028298		2610306M01Rik	-	RIKEN cDNA 2610306M01 gene	ncRNA
common_peak1-17087-30-14-1.26278481388335-2.47671208917977	chr6	112209256	112210773	+	0	NA	Intergenic	B4|SINE|B4	-13738	NM_144799	30937	Mm.234441	NM_144799	ENSMUSG00000057604	Lmcd1	AW455500|AW553074|dyxin	LIM and cysteine-rich domains 1	protein-coding
common_peak2-27731-11-19--0.813234510635749-0.769930178837768	chr3	123676525	123677297	+	0	NA	Intergenic	Intergenic	-283141	NR_121616	83398	Mm.443908	NM_031186	ENSMUSG00000027977	Ndst3	4921531K01Rik|4930511P15Rik|N-HSST 3|NDST-3	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	protein-coding
unique_peak2-38156-11-14--0.398197011356905-0.379391706698377	chr6	86772095	86773017	+	0	NA	Intergenic	Intergenic	26878	NR_028298	67170	Mm.119489	NR_028298		2610306M01Rik	-	RIKEN cDNA 2610306M01 gene	ncRNA
common_peak1-11493-19-27--0.404667595395917-0.464317215211849	chr15	102518211	102519005	+	0	NA	Intergenic	B3|SINE|B2	-16311	NR_030460	751542		NR_030460	miRBase:MI0004653	Mir688	Mirn688|mmu-mir-688	microRNA 688	ncRNA
common_peak2-22176-31-35-0.0553136693708112-0.313095283157747	chr12	101912467	101913415	+	0	NA	intron (NM_153587, intron 2 of 17)	B1_Mur1|SINE|Alu	50297	NM_153587	73086	Mm.220417	NM_153587	ENSMUSG00000021180	Rps6ka5	3110005L17Rik|6330404E13Rik|AI854034|MSK1|MSPK1|RLPK	ribosomal protein S6 kinase, polypeptide 5	protein-coding
unique_peak2-38347-8-13--0.802132504110034-0.562038191119711	chr7	127745495	127746149	+	0	NA	Intergenic	Intergenic	4683	NR_024324	78552	Mm.289190	NR_024324		E130201H02Rik	-	Y box protein 1 pseudogene	pseudo
common_peak2-29373-135-211-0.0295649484772627-0.313743824913016	chr6	108658194	108661561	+	0	NA	Intergenic	Intergenic	-48949	NR_104577	75394	Mm.395061	NR_040757	ENSMUSG00000087341	0610040F04Rik	-	RIKEN cDNA 0610040F04 gene	ncRNA
common_peak1-8167-33-47--0.253624938195627-0.423463616707761	chr1	195130805	195131703	+	0	NA	intron (NM_008484, intron 3 of 22)	intron (NM_008484, intron 3 of 22)	2817	NM_001277928	16780	Mm.435441	NM_008484	ENSMUSG00000026639	Lamb3	-	laminin, beta 3	protein-coding
unique_peak2-35832-5-27--2.51173525806346-3.91086220464714	chr18	66505487	66506386	+	0	NA	Intergenic	Lx4A|LINE|L1	-54444	NM_178793	320924	Mm.442049	NM_178793	ENSMUSG00000046318	Ccbe1	4933426F18Rik|9430093N24Rik|mKIAA1983	collagen and calcium binding EGF domains 1	protein-coding
common_peak1-15058-10-8-0.186490343566457-1.078512453669	chr3	123072306	123072835	+	0	NA	exon (NM_201638, exon 11 of 11)	exon (NM_201638, exon 11 of 11)	16338	NM_201638	210529	Mm.260039	NM_201638	ENSMUSG00000028114	Mettl14	G430022H21Rik|mKIAA1627	methyltransferase like 14	protein-coding
unique_peak2-32436-1-5--2.2120195109379-1.32905871926422	chr1	105905919	105906343	+	0	NA	Intergenic	Intergenic	-759265	NM_011800	23836	Mm.103640	NM_011800	ENSMUSG00000050840	Cdh20	Cdh7	cadherin 20	protein-coding
unique_peak1-3258-29-5-2.52732757989395-5.79706174304447	chr18	65524011	65525168	+	0	NA	intron (NM_001037294, intron 3 of 12)	intron (NM_001037294, intron 3 of 12)	28953	NM_001037294	225638	Mm.296528	NM_001037294	ENSMUSG00000032845	Alpk2	Gm549|Hak	alpha-kinase 2	protein-coding
unique_peak2-34218-3-6--1.22133801201688-1.08602067057793	chr13	48843206	48843731	+	0	NA	Intergenic	Intergenic	85063	NM_007526	12022	Mm.42241	NM_007526	ENSMUSG00000021381	Barx1	-	BarH-like homeobox 1	protein-coding
unique_peak2-34264-7-7--0.200909169701811-0.97990265578305	chr13	64369858	64370324	+	0	NA	TTS (NR_045798)	TTS (NR_045798)	6205	NM_172587	218294	Mm.25335	NM_172587	ENSMUSG00000033102	Cdc14b	2810432N10Rik|A530086E13Rik|AA472821|CDC14B3|Cdc14B1	CDC14 cell division cycle 14B	protein-coding
common_peak2-30363-54-68-0.0645613048515647-0.325850200743459	chr7	28375136	28376849	+	0	NA	promoter-TSS (NM_001110208)	promoter-TSS (NM_001110208)	-587	NM_001110208	11652	Mm.177194	NM_007434	ENSMUSG00000004056	Akt2	2410016A19Rik|AW554154|PKB|PKBbeta	thymoma viral proto-oncogene 2	protein-coding
unique_peak1-997-34-15-1.38206852700127-3.19271205772594	chr11	70571567	70573230	+	0	NA	Intergenic	MTD|LTR|MaLR	-5551	NM_177565	193043	Mm.40966	NM_177565	ENSMUSG00000043602	Zfp3	AI854635|B230309J24|Fnp-1|Zfp-3	zinc finger protein 3	protein-coding
unique_peak2-35277-1-5--2.2120195109379-1.32905871926422	chr17	5187863	5188285	+	0	NA	intron (NM_001085355, intron 4 of 19)	intron (NM_001085355, intron 4 of 19)	193000	NM_001085355	239985	Mm.133401	NM_001085355	ENSMUSG00000069729	Arid1b	8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235	AT rich interactive domain 1B (SWI-like)	protein-coding
unique_peak1-4161-9-1-2.18961340640422-2.31132995230379	chr2	104533909	104534430	+	0	NA	intron (NM_177190, intron 5 of 9)	intron (NM_177190, intron 5 of 9)	18150	NM_177190	320554	Mm.249065	NM_177190	ENSMUSG00000027175	Tcp11l1	C130096D04Rik	t-complex 11 like 1	protein-coding
unique_peak1-3588-20-2-2.90311228387004-4.53603905993749	chr19	29945596	29946759	+	0	NA	Intergenic	Intergenic	-53427	NM_133775	77125	Mm.182359	NM_133775	ENSMUSG00000024810	Il33	9230117N10Rik|Il-33|Il1f11|NF-HEV	interleukin 33	protein-coding
unique_peak1-3946-35-13-1.6240153364049-3.98058741041079	chr2	29633037	29634302	+	0	NA	intron (NR_110962, intron 5 of 5)	intron (NR_110962, intron 5 of 5)	9522	NM_001290496	227682	Mm.245739	NM_145520		Trub2	G430055L02Rik	TruB pseudouridine (psi) synthase homolog 2 (E. coli)	protein-coding
common_peak2-28229-9-13--0.617741515653384-0.459837087125828	chr4	119294014	119294471	+	0	NA	exon (NM_172699, exon 10 of 13)	exon (NM_172699, exon 10 of 13)	-16095	NM_008190	14915	Mm.2614	NM_008190	ENSMUSG00000023247	Guca2a	Guca2	guanylate cyclase activator 2a (guanylin)	protein-coding
common_peak2-25053-21-21-0.110057646628938-0.344491671143527	chr18	32377227	32378197	+	0	NA	intron (NM_011946, intron 13 of 16)	RSINE1|SINE|B4	-22273	NM_133658	13872	Mm.282335	NM_133658	ENSMUSG00000024382	Ercc3	BTF2 p89|Ercc-3|XPB	excision repair cross-complementing rodent repair deficiency, complementation group 3	protein-coding
common_peak2-23866-26-34--0.201383924786504-0.35535220421655	chr15	102518081	102519437	+	0	NA	Intergenic	B3|SINE|B2	-16462	NR_030460	751542		NR_030460	miRBase:MI0004653	Mir688	Mirn688|mmu-mir-688	microRNA 688	ncRNA
common_peak1-8046-15-17--0.157760250886656-0.307611222530528	chr1	171477927	171478584	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-16660	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
common_peak2-27048-4-13--1.83081543591085-2.04196296489515	chr2	180276168	180276682	+	0	NA	intron (NM_018766, intron 3 of 3)	intron (NM_018766, intron 3 of 3)	-39584	NM_028479	73247	Mm.426558	NM_028479	ENSMUSG00000027569	Mrgbp	1600027N09Rik|AW060503|C80444	MRG/MORF4L binding protein	protein-coding
common_peak1-10873-19-47--1.18227517405947-2.51566814918164	chr15	38518436	38519263	+	0	NA	intron (NR_045757, intron 1 of 2)	intron (NR_045757, intron 1 of 2)	5840	NR_045757	69679	Mm.416890	NR_045757		2310043O21Rik	-	RIKEN cDNA 2310043O21 gene	ncRNA
unique_peak2-34735-2-14--2.82434485187184-3.03832868024006	chr15	39112928	39113531	+	0	NA	intron (NM_053271, intron 3 of 26)	Lx7|LINE|L1	83397	NM_053271	116838	Mm.309296	NM_053271		Rims2	2810036I15Rik|AW048769|RIM2|Rab3ip2|Rim2(+40A)|Rim2(+44A)|Rim2(+4A)|Serg2|Syt3-rs|mKIAA0751	regulating synaptic membrane exocytosis 2	protein-coding
common_peak1-11793-36-57--0.378659908959817-0.608301926896957	chr16	55821442	55822780	+	0	NA	exon (NM_001159394, exon 1 of 12)	exon (NM_001159394, exon 1 of 12)	140	NM_001159394	80859	Mm.247272	NM_030612	ENSMUSG00000035356	Nfkbiz	AA408868|INAP|Mail	nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta	protein-coding
common_peak1-13167-33-25-0.630897844384437-1.05951140195658	chr19	11769912	11771086	+	0	NA	Intergenic	Lx|LINE|L1	-1046	NM_001033283	225923	Mm.297596	NM_001033283	ENSMUSG00000055933	Oosp3	Gm97	oocyte secreted protein 3	protein-coding
common_peak2-29354-8-6-0.197867495889966-1.03789460276074	chr5	150332566	150332969	+	0	NA	intron (NM_029440, intron 1 of 22)	intron (NM_029440, intron 1 of 22)	1513	NM_029440	381693	Mm.136919	NM_029440	ENSMUSG00000029658	Wdr95	4930434E21Rik	WD40 repeat domain 95	protein-coding
common_peak2-29465-93-80-0.771219860621644-3.69256632733414	chr6	29735147	29736583	+	0	NA	intron (NM_001171000, intron 1 of 16)	intron (NM_001171000, intron 1 of 16)	17422	NM_001171000	74340	Mm.210899	NM_021414	ENSMUSG00000029772	Ahcyl2	4631427C17Rik|AI227036|Adohcyase3|mKIAA0828	S-adenosylhomocysteine hydrolase-like 2	protein-coding
unique_peak2-32880-7-5-0.214128329577033-1.01466476204226	chr10	9676867	9677289	+	0	NA	Intergenic	Intergenic	-56240	NM_001081344	78808	Mm.331751	NM_030191	ENSMUSG00000019790	Stxbp5	0710001E20Rik|4930565N16Rik|AW742610|LGL3|mKIAA1006	syntaxin binding protein 5 (tomosyn)	protein-coding
common_peak1-13590-7-11--0.785871670422967-1.21681515183528	chr2	16024943	16025471	+	0	NA	Intergenic	L1Md_A|LINE|L1	-252724	NM_026162	67448	Mm.313938	NM_026162	ENSMUSG00000026748	Plxdc2	1200007L24Rik|5430431D22Rik|AI646728|AU022916|AV231634|Tem7r	plexin domain containing 2	protein-coding
unique_peak2-35472-5-10--1.16381195464315-1.33892459842472	chr17	44188572	44189153	+	0	NA	Intergenic	Intergenic	-26933	NM_032003	83965	Mm.30145	NM_032003	ENSMUSG00000023960	Enpp5	AW061004|D17Abb1e|E-NPP 5|mKIAA4152	ectonucleotide pyrophosphatase/phosphodiesterase 5	protein-coding
unique_peak1-1913-10-7-0.356415345008769-1.12966497611638	chr14	70333034	70333544	+	0	NA	intron (NM_028560, intron 3 of 6)	PB1D9|SINE|Alu	93075	NM_028526	73523	Mm.23509	NM_028526	ENSMUSG00000022085	Pebp4	PEBP-4	phosphatidylethanolamine binding protein 4	protein-coding
common_peak1-17167-18-27--0.494435770829252-0.528262014464654	chr6	120135038	120135875	+	0	NA	intron (NM_016718, intron 1 of 3)	B1_Mm|SINE|Alu	92058	NM_016718	29862	Mm.103668	NM_016718	ENSMUSG00000041377	Ninj2	-	ninjurin 2	protein-coding
common_peak1-10389-21-19-0.247561170378873-0.427564438475253	chr13	95617620	95618666	+	0	NA	Intergenic	ID4_|SINE|ID	-27439	NM_011021	18420	Mm.42051	NM_011021		Otp	-	orthopedia homolog (Drosophila)	protein-coding
common_peak2-24890-19-19-0.0807592317743238-0.322753776620787	chr17	84042831	84043581	+	0	NA	Intergenic	Intergenic	-11971	NM_153512	225030	Mm.223506	NM_153512	ENSMUSG00000045053	Kcng3	KV6.3|Kv10.1a|Kv10.1b	potassium voltage-gated channel, subfamily G, member 3	protein-coding
unique_peak2-38466-5-7--0.704380336005853-1.01466476204226	chr7	28959686	28960115	+	0	NA	exon (NM_007991, exon 3 of 9)	exon (NM_007991, exon 3 of 9)	-4602	NM_001037957	13549	Mm.57249	NM_010092	ENSMUSG00000002409	Dyrk1b	Mirk	dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b	protein-coding
common_peak1-11935-27-14-1.08465535528672-1.87214134458703	chr17	87523139	87524238	+	0	NA	intron (NM_019654, intron 2 of 2)	intron (NM_019654, intron 2 of 2)	16669	NM_019654	56468	Mm.126885	NM_019654	ENSMUSG00000037104	Socs5	1810018L08Rik|Cish5|mKIAA0671	suppressor of cytokine signaling 5	protein-coding
common_peak1-8683-14-10-0.439784541720347-0.519648556297791	chr11	20331953	20332704	+	0	NA	Intergenic	Intergenic	-99612	NM_018861	55963	Mm.6379	NM_018861	ENSMUSG00000020142	Slc1a4	ASCT-1|ASCT1|AW045657|SATT	solute carrier family 1 (glutamate/neutral amino acid transporter), member 4	protein-coding
common_peak2-29934-16-8-0.948338640825749-1.02063122982878	chr6	115540048	115540409	+	0	NA	intron (NM_001101431, intron 1 of 3)	PB1D10|SINE|Alu	2366	NM_001101431	70291	Mm.133694	NM_001101431		Mkrn2os	2510049J12Rik	makorin, ring finger protein 2, opposite strand	protein-coding
common_peak2-20520-9-10--0.269818212233077-1.05503135781948	chr10	61383072	61383601	+	0	NA	intron (NM_007731, intron 2 of 40)	intron (NM_007731, intron 2 of 40)	58520	NM_007731	12817	Mm.300931	NM_007731	ENSMUSG00000058806	Col13a1	-	collagen, type XIII, alpha 1	protein-coding
common_peak2-24309-9-8-0.0196884049619079-1.03275496310833	chr17	35896944	35897391	+	0	NA	Intergenic	ID4_|SINE|ID	-12228	NR_045459	74601	Mm.410840	NR_045459	ENSMUSG00000092171	4833427F10Rik	-	RIKEN cDNA 4833427F10 gene	ncRNA
common_peak2-25013-35-53--0.323517243700964-0.527635886371667	chr18	20745327	20746429	+	0	NA	intron (NM_007883, intron 8 of 14)	RMER16-int|LTR|ERVK	29261	NM_007883	13511	Mm.345891	NM_007883	ENSMUSG00000044393	Dsg2	AA408168|D18Ertd293e	desmoglein 2	protein-coding
common_peak2-31697-53-103--0.559466705725163-1.58625694371146	chr9	43105107	43107276	+	0	NA	Intergenic	Intergenic	-12655	NM_023655	72169	Mm.273277	NM_023655	ENSMUSG00000032013	Trim29	1110047J21Rik|2810431N19Rik|4732461M22Rik|AI119726	tripartite motif-containing 29	protein-coding
unique_peak2-32897-4-4--0.345388608740609-0.864171920961574	chr10	17549218	17549648	+	0	NA	intron (NM_138628, intron 5 of 9)	intron (NM_138628, intron 5 of 9)	33408	NM_138628	378431	Mm.283493	NM_138628	ENSMUSG00000039891	Txlnb	2310001N14Rik|Mdp77	taxilin beta	protein-coding
unique_peak1-2556-15-5-1.4272022498345-1.61682445937017	chr16	24102980	24103742	+	0	NA	Intergenic	Intergenic	-114663	NM_009744	12053	Mm.347398	NM_009744	ENSMUSG00000022508	Bcl6	Bcl5	B cell leukemia/lymphoma 6	protein-coding
common_peak2-23084-11-7-0.508693584251613-1.21681515183528	chr14	76110836	76111337	+	0	NA	intron (NM_177381, intron 20 of 22)	intron (NM_177381, intron 20 of 22)	43214	NM_177381	338337	Mm.86507	NM_177381	ENSMUSG00000034893	Cog3	E430004N23	component of oligomeric golgi complex 3	protein-coding
unique_peak2-36266-8-16--1.08224042330277-0.891319708951328	chr2	59618040	59618740	+	0	NA	intron (NM_001290659, intron 6 of 25)	intron (NM_001290659, intron 6 of 25)	102273	NM_001159636	72137	Mm.288734	NM_028118	ENSMUSG00000026988	Wdsub1	1700048E19Rik|2610014F08Rik	WD repeat, SAM and U-box domain containing 1	protein-coding
common_peak1-15866-13-10-0.319040412000471-0.446472590016315	chr5	5320014	5320767	+	0	NA	intron (NM_011074, intron 2 of 14)	intron (NM_011074, intron 2 of 14)	59861	NM_011074	18647	Mm.389061	NM_011074	ENSMUSG00000028926	Cdk14	Pftk1|mKIAA0834	cyclin-dependent kinase 14	protein-coding
common_peak1-19274-12-24--0.995080204687086-1.0220094258199	chr9	116383796	116384299	+	0	NA	Intergenic	Intergenic	-299566	NM_009371	21813	Mm.172346	NM_009371	ENSMUSG00000032440	Tgfbr2	1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII	transforming growth factor, beta receptor II	protein-coding
common_peak2-32402-26-46--0.626689759519175-1.0379745517287	chrX	144317500	144318948	+	0	NA	Intergenic	MURVY-LTR|LTR|ERV1	-109312	NM_001198988	666184	Mm.422381	NM_001198988	ENSMUSG00000072931	Gm15080	OTTMUSG00000018964|Ott-like	predicted gene 15080	protein-coding
common_peak2-28710-28-50--0.619466222150033-1.0624982013315	chr5	34761732	34762585	+	0	NA	intron (NM_001243123, intron 2 of 20)	intron (NM_001243123, intron 2 of 20)	49576	NM_001243123	231128	Mm.286885	NM_001030306	ENSMUSG00000037210	Fam193a	-	family with sequence similarity 193, member A	protein-coding
common_peak1-10256-16-24--0.525592547506663-0.561823156887258	chr13	55321392	55322144	+	0	NA	intron (NM_008739, intron 2 of 22)	RSINE1|SINE|B4	10625	NM_008739	18193	Mm.12964	NM_008739	ENSMUSG00000021488	Nsd1	AI528500|KMT3B	nuclear receptor-binding SET-domain protein 1	protein-coding
common_peak1-8393-14-18--0.348711353085941-0.360333814299795	chr10	66863959	66864602	+	0	NA	Intergenic	MER20|DNA|MER1_type	-116251	NM_001036293	641340	Mm.136223	NM_001036293	ENSMUSG00000075000	Nrbf2	NRBF-2	nuclear receptor binding factor 2	protein-coding
common_peak1-12222-18-20--0.0793982715504091-0.301029995663976	chr17	34915541	34916190	+	0	NA	Intergenic	Intergenic	25506	NM_009995	13079	Mm.440407	NM_009995	ENSMUSG00000024365	Cyp21a1	21-OH|21OH|21OHA|21OHB|CYP21OH-A|Cyp21|Cyp21-ps1|Cyp21B|Cyp21a2-ps|Cyp21a2ps|Oh21-1|Oh21-2	cytochrome P450, family 21, subfamily a, polypeptide 1	protein-coding
common_peak1-10624-41-65--0.343245414509793-0.615335714844035	chr14	34673573	34675087	+	0	NA	Intergenic	ORR1B1|LTR|MaLR	-62443	NM_145741	14560	Mm.432071	NM_145741	ENSMUSG00000021943	Gdf10	Bmp3b	growth differentiation factor 10	protein-coding
unique_peak1-5730-8-2-1.42025991722641-1.65811743852845	chr6	43382837	43383289	+	0	NA	intron (NM_013861, intron 7 of 8)	intron (NM_013861, intron 7 of 8)	-9365	NR_045988	319812	Mm.446393	NR_045988		9430018G01Rik	-	RIKEN cDNA 9430018G01 gene	ncRNA
common_peak1-10593-41-15-1.70114870484866-4.99657067904014	chr14	31000769	31002179	+	0	NA	intron (NM_001083616, intron 4 of 46)	L1VL4|LINE|L1	165198	NM_001083616	12289	Mm.9772	NM_028981	ENSMUSG00000015968	Cacna1d	8430418G19Rik|C79217|Cacnl1a2|Cchl1a|Cchl1a2|D-LTCC	calcium channel, voltage-dependent, L type, alpha 1D subunit	protein-coding
common_peak1-11066-10-8-0.186490343566457-1.078512453669	chr15	57975042	57975598	+	0	NA	intron (NM_029734, intron 1 of 5)	RLTR25B|LTR|ERVK	2329	NM_029734	76773	Mm.26771	NM_029734	ENSMUSG00000022359	Wdyhv1	2410187C16Rik|AU014961|AW550036|Ntaq1	WDYHV motif containing 1	protein-coding
common_peak1-8483-17-39--1.10363175668232-1.82978420966174	chr10	80622590	80623399	+	0	NA	intron (NM_021501, intron 2 of 10)	B1_Mur4|SINE|Alu	7471	NM_021501	59004	Mm.34428	NM_021501		Pias4	PIASY|Pias-gamma|Piasg	protein inhibitor of activated STAT 4	protein-coding
common_peak1-8000-11-31--1.49130641574839-2.45535166244229	chr1	164224574	164225127	+	0	NA	intron (NM_172646, intron 11 of 19)	intron (NM_172646, intron 11 of 19)	71351	NR_029796	387210		NR_029796	miRBase:MI0000698	Mir214	Mirn214|mmu-mir-214	microRNA 214	ncRNA
common_peak2-26997-15-13-0.204809828498052-0.368541233333383	chr2	169607502	169608080	+	0	NA	intron (NM_080455, intron 1 of 1)	intron (NM_080455, intron 1 of 1)	148645	NM_080455	228911	Mm.315789	NM_080455	ENSMUSG00000047907	Tshz2	2900073F20Rik|B830045G17|Mtsh2|Sdccag33l|Tsh2|Zfp218|mKIAA4248|teashirt2	teashirt zinc finger family member 2	protein-coding
unique_peak2-33762-3-10--1.87341470859657-1.75805390616669	chr11	117825973	117826459	+	0	NA	Intergenic	Intergenic	4464	NM_007707	12702	Mm.3468	NM_007707	ENSMUSG00000053113	Socs3	Cis3|Cish3|EF-10|Ef10|SSI-3|Ssi3	suppressor of cytokine signaling 3	protein-coding
common_peak2-21060-19-31--0.597312673338314-0.721233599456203	chr11	48817020	48817845	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-11676	NM_001145164	100039796	Mm.482363	NM_001145164	ENSMUSG00000078921	Tgtp2	OTTMUSG00000005537	T cell specific GTPase 2	protein-coding
common_peak1-12914-31-18-0.977311157369538-1.75610071733784	chr18	85306298	85307459	+	0	NA	Intergenic	(TAAA)n|Simple_repeat|Simple_repeat	-185962	NM_025969	67105	Mm.250617	NM_025969	ENSMUSG00000024645	Timm21	1700034H14Rik|2700002I20Rik	tranlocase of inner mitochondrial membrane 21	protein-coding
unique_peak1-2808-9-5-0.604650905683064-1.21398586181642	chr17	23857574	23858094	+	0	NA	Intergenic	Intergenic	-5469	NM_023058	268930	Mm.182193	NM_023058	ENSMUSG00000023908	Pkmyt1	6230424P17|AW209059|Myt1	protein kinase, membrane associated tyrosine/threonine 1	protein-coding
common_peak1-10704-22-26--0.107603397076064-0.30528805757448	chr14	57798076	57798932	+	0	NA	Intergenic	Intergenic	-46056	NM_001010937	14623	Mm.25652	NM_008128	ENSMUSG00000040055	Gjb6	AA958971|Cx30|D14Bwg0506e	gap junction protein, beta 6	protein-coding
common_peak1-9474-17-30--0.735899972181837-0.841847921495509	chr11	106084577	106085377	+	0	NA	intron (NM_028074, intron 1 of 17)	intron (NM_028074, intron 1 of 17)	6737	NM_028074	72047	Mm.41367	NM_028074	ENSMUSG00000020705	Ddx42	1810047H21Rik|AW319508|AW556242|B430002H05Rik|RHELP|RNAHP|SF3b125	DEAD (Asp-Glu-Ala-Asp) box polypeptide 42	protein-coding
unique_peak2-35393-2-7--1.91745425626332-1.45399745587252	chr17	31872542	31872987	+	0	NA	Intergenic	MT2B2|LTR|ERVL	57888	NM_001278570	12954	Mm.1228	NM_013501	ENSMUSG00000024041	Cryaa	Acry-1|Crya-1|Crya1|DAcry-1|lop18	crystallin, alpha A	protein-coding
common_peak1-9614-17-17-0.0483713367627256-0.325169893479371	chr11	120795867	120796933	+	0	NA	Intergenic	(TTTG)n|Simple_repeat|Simple_repeat	-2214	NM_027745	71276	Mm.275751	NM_027745	ENSMUSG00000048445	Ccdc57	4933434G05Rik	coiled-coil domain containing 57	protein-coding
common_peak2-20317-12-16--0.4386868561627-0.368541233333383	chr10	69926663	69927327	+	0	NA	intron (NM_024244, intron 3 of 13)	intron (NM_024244, intron 3 of 13)	23337	NM_001143776	71721	Mm.477813	NM_024244	ENSMUSG00000043259	Fam13c	1200015N20Rik|C030038O19Rik|mKIAA1796	family with sequence similarity 13, member C	protein-coding
common_peak1-14562-9-11--0.395349094316936-0.344532117358383	chr3	36612800	36613440	+	0	NA	Intergenic	Intergenic	-24031	NM_019510	22065	Mm.74363	NM_019510	ENSMUSG00000027716	Trpc3	Mwk|Trcp3|Trp3|Trrp3	transient receptor potential cation channel, subfamily C, member 3	protein-coding
common_peak2-28686-70-107--0.13492058578807-0.386857220532368	chr5	33017823	33019947	+	0	NA	Intergenic	Intergenic	105341	NM_009535	22612	Mm.4558	NM_009535	ENSMUSG00000014932	Yes1	Yes|p61-Yes	Yamaguchi sarcoma viral (v-yes) oncogene homolog 1	protein-coding
unique_peak1-6892-9-6-0.382258484346616-1.11707584880836	chr8	94781571	94782090	+	0	NA	Intergenic	Intergenic	98189	NR_110452	71296	Mm.86664	NR_033641	ENSMUSG00000031736	Crnde	4933436C20Rik	colorectal neoplasia differentially expressed (non-protein coding)	ncRNA
common_peak1-17644-22-27--0.160070816970199-0.317737750275047	chr7	51913062	51913967	+	0	NA	intron (NM_001271538, intron 3 of 40)	intron (NM_001271538, intron 3 of 40)	7359	NM_001271538	71960	Mm.158289	NM_028021	ENSMUSG00000030739	Myh14	2400004E04Rik|II-C|NHMCII|NMHC II-C	myosin, heavy polypeptide 14	protein-coding
common_peak1-17067-22-25--0.0531556130536872-0.301029995663976	chr6	106768552	106769813	+	0	NA	Intergenic	B4|SINE|B4	-19101	NM_175357	58799	Mm.290085	NM_021449		Crbn	2610203G15Rik|2900045O07Rik|AF229032|AW108261|piL	cereblon	protein-coding
common_peak1-9249-26-29-0.0210084965499435-0.304710633611964	chr11	86645805	86646926	+	0	NA	Intergenic	Intergenic	-25203	NM_026191	67487	Mm.260627	NM_026191	ENSMUSG00000018425	Dhx40	2410016C14Rik|ARG147|DDX40|PAD	DEAH (Asp-Glu-Ala-His) box polypeptide 40	protein-coding
common_peak1-12522-43-24-1.13870699574898-3.01487716443559	chr18	42056416	42058061	+	0	NA	intron (NM_029942, intron 5 of 6)	intron (NM_029942, intron 5 of 6)	53610	NM_029942	77619	Mm.30649	NM_029942	ENSMUSG00000056671	Prelid2	1700003A01Rik|C330008K14Rik	PRELI domain containing 2	protein-coding
unique_peak2-36054-0-5--3.42509343119537-1.32905871926422	chr19	46900506	46900690	+	0	NA	intron (NM_001102471, intron 1 of 6)	intron (NM_001102471, intron 1 of 6)	64499	NM_001102471	94219	Mm.306903	NM_033569	ENSMUSG00000064105	Cnnm2	AU015877|AW048635|Acdp2|Clp2	cyclin M2	protein-coding
common_peak1-15418-14-24--0.74464002941708-0.756118839439549	chr4	88790909	88791638	+	0	NA	intron (NM_024433, intron 1 of 7)	intron (NM_024433, intron 1 of 7)	7999	NM_024433	66902	Mm.28500	NM_024433	ENSMUSG00000062937	Mtap	1300019I21Rik|MSAP	methylthioadenosine phosphorylase	protein-coding
unique_peak1-5274-11-3-1.50869358425161-1.95434855131066	chr5	64879875	64880543	+	0	NA	Intergenic	Intergenic	11962	NR_045413	77382	Mm.366742	NR_045411		C030018K13Rik	-	RIKEN cDNA C030018K13 gene	ncRNA
unique_peak1-2838-7-3-0.799090830298189-1.23214870625617	chr17	28340185	28340666	+	0	NA	intron (NM_172617, intron 13 of 14)	ID4_|SINE|ID	-4298	NM_027185	23853	Mm.204731	NM_027185	ENSMUSG00000002257	Def6	2410003F05Rik|6430538D02Rik|AV094905|Ibp|Slat|Slat2|Slat6	differentially expressed in FDCP 6	protein-coding
common_peak1-10579-38-67--0.516010181951809-0.985819031340023	chr14	26579424	26580210	+	0	NA	intron (NM_001101433, intron 1 of 3)	intron (NM_001101433, intron 1 of 3)	8525	NM_001101433	71918	Mm.41904	NM_001101433	ENSMUSG00000055538	Zcchc24	2310047A01Rik	zinc finger, CCHC domain containing 24	protein-coding
unique_peak2-33845-5-9--1.02630843089322-1.21398586181642	chr12	16810682	16811115	+	0	NA	Intergenic	Intergenic	-3206	NM_015764	268527	Mm.428062	NM_015764	ENSMUSG00000036523	Greb1	5730583K22Rik|9130004E13|AF180470|AU023194|mKIAA0575	gene regulated by estrogen in breast cancer protein	protein-coding
unique_peak1-6841-10-3-1.35641534500877-1.75805390616669	chr8	83737183	83737635	+	0	NA	Intergenic	Lx|LINE|L1	-129052	NM_001024617	234515	Mm.324468	NM_001024617	ENSMUSG00000037940	Inpp4b	E130107I17Rik	inositol polyphosphate-4-phosphatase, type II	protein-coding
common_peak2-20674-19-26--0.352200175501782-0.416752705545949	chr10	85956976	85957985	+	0	NA	intron (NM_001164495, intron 1 of 6)	intron (NM_001164495, intron 1 of 6)	4161	NM_001164495	27204	Mm.394931	NM_013722	ENSMUSG00000059602	Syn3	-	synapsin III	protein-coding
common_peak1-16719-93-81-0.753517858888185-3.55993834863117	chr6	29735038	29736589	+	0	NA	intron (NM_001171000, intron 1 of 16)	intron (NM_001171000, intron 1 of 16)	17370	NM_001171000	74340	Mm.210899	NM_021414	ENSMUSG00000029772	Ahcyl2	4631427C17Rik|AI227036|Adohcyase3|mKIAA0828	S-adenosylhomocysteine hydrolase-like 2	protein-coding
common_peak1-19287-15-24--0.631691439219068-0.650819692678081	chr9	119983087	119983671	+	0	NA	Intergenic	A-rich|Low_complexity|Low_complexity	-5965	NM_009987	13051	Mm.44065	NM_009987	ENSMUSG00000052336	Cx3cr1	-	chemokine (C-X3-C motif) receptor 1	protein-coding
common_peak1-10394-18-14-0.406028555619833-0.532159081577619	chr13	96936755	96937769	+	0	NA	Intergenic	Intergenic	-34730	NM_029210	75209	Mm.40436	NM_029210	ENSMUSG00000051111	Sv2c	4930527L09Rik|AI841971	synaptic vesicle glycoprotein 2c	protein-coding
common_peak2-29518-7-16--1.28837201095215-1.08658567012551	chr6	34864024	34864660	+	0	NA	Intergenic	Intergenic	-3511	NM_001013366	101240	Mm.152120	NM_001013366	ENSMUSG00000058486	Wdr91	9530020G05Rik|AI987683|AU018665	WD repeat domain 91	protein-coding
unique_peak1-6748-8-1-2.00522241794757-2.05605744720049	chr8	47950480	47951013	+	0	NA	Intergenic	RMER19B|LTR|ERVK	-121533	NM_177304	320981	Mm.211429	NM_177304	ENSMUSG00000038173	Enpp6	4833421B01Rik|B830047L21Rik|D8Ertd514e|E-NPP 6|Npp6	ectonucleotide pyrophosphatase/phosphodiesterase 6	protein-coding
common_peak2-29942-25-32--0.182544214013348-0.333081040816759	chr6	116337794	116338612	+	0	NA	intron (NM_027920, intron 2 of 6)	intron (NM_027920, intron 2 of 6)	50062	NM_027920	71779	Mm.27064	NM_027920	ENSMUSG00000025702	March8	1300017E09Rik|Mir	membrane-associated ring finger (C3HC4) 8	protein-coding
common_peak1-14376-10-7-0.356415345008769-1.12966497611638	chr2	168072096	168072614	+	0	NA	Intergenic	MER74A|LTR|ERVL	16233	NM_001160330	69372	Mm.482182	NM_001160330	ENSMUSG00000074576	Mocs3	1700020H17Rik|Uba4	molybdenum cofactor synthesis 3	protein-coding
unique_peak2-35311-1-12--3.32749672835784-3.1004765869889	chr17	14339651	14340022	+	0	NA	intron (NM_172826, intron 1 of 3)	intron (NM_172826, intron 1 of 3)	1002	NM_172826	240025	Mm.79993	NM_172826	ENSMUSG00000048826	Dact2	2900084M21Rik|A630024E20|Dpr2|Frd2|dapper2	dapper homolog 2, antagonist of beta-catenin (xenopus)	protein-coding
common_peak1-15632-13-4-1.45654393575041-2.23384849113406	chr4	133815085	133815608	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	-5325	NM_001099296	72690	Mm.100168	NM_001099296	ENSMUSG00000050105	Grrp1	2810043G13Rik|Fam110d	glycine/arginine rich protein 1	protein-coding
unique_peak2-35236-5-7--0.704380336005853-1.01466476204226	chr16	92696701	92697124	+	0	NA	5' UTR (NM_009821, exon 1 of 5)	5' UTR (NM_009821, exon 1 of 5)	662	NM_001111023	12394	Mm.4081	NM_009821	ENSMUSG00000022952	Runx1	AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b	runt related transcription factor 1	protein-coding
unique_peak1-6608-9-1-2.18961340640422-2.31132995230379	chr8	94961203	94961742	+	0	NA	Intergenic	Intergenic	79777	NM_018826	54352	Mm.101153	NM_018826	ENSMUSG00000031737	Irx5	-	Iroquois related homeobox 5 (Drosophila)	protein-coding
common_peak2-30078-9-8-0.0196884049619079-1.03275496310833	chr6	134262796	134263172	+	0	NA	Intergenic	Intergenic	-83363	NM_025778	66813	Mm.474472	NM_025778	ENSMUSG00000030200	Bcl2l14	4930452K23Rik|4933405K19Rik|9030625M01Rik|AI429211|Bclg	BCL2-like 14 (apoptosis facilitator)	protein-coding
common_peak1-13903-63-72-0.248488032190572-0.608771260156328	chr2	79398181	79399973	+	0	NA	Intergenic	L1MC3|LINE|L1	-76505	NM_080558	70599	Mm.272881	NM_080558	ENSMUSG00000027007	Ssfa2	5730488C15Rik|CS-1|CS1|KRAP|SPAG13|mKIAA1927	sperm specific antigen 2	protein-coding
unique_peak2-37852-11-21--0.950738034385684-0.991115276827166	chr5	135933895	135934647	+	0	NA	intron (NM_146001, intron 2 of 30)	intron (NM_146001, intron 2 of 30)	-63855	NM_148932	107939	Mm.28399	NM_148932	ENSMUSG00000053293	Pom121	2610027A18Rik|C80273|mKIAA0618	nuclear pore membrane protein 121	protein-coding
unique_peak2-37157-2-5--1.50241675698448-1.08602067057793	chr4	41094345	41094754	+	0	NA	intron (NM_026275, intron 1 of 4)	intron (NM_026275, intron 1 of 4)	11495	NM_026275	67615	Mm.389540	NM_026275	ENSMUSG00000036241	Ube2r2	1200003M11Rik|Cdc34b|Ubc3b	ubiquitin-conjugating enzyme E2R 2	protein-coding
unique_peak1-4991-8-0-3.00522241794757-2.70926996097583	chr4	116450197	116450694	+	0	NA	intron (NM_146151, intron 4 of 10)	ID_B1|SINE|B4	29719	NM_026654	68276	Mm.30534	NM_026654	ENSMUSG00000028688	Toe1	4930584N22Rik|4933424D16Rik|AI413517	target of EGR1, member 1 (nuclear)	protein-coding
unique_peak2-39320-3-5--0.998945590680433-0.96108193396963	chr8	125341463	125341684	+	0	NA	3' UTR (NM_144932, exon 10 of 10)	3' UTR (NM_144932, exon 10 of 10)	-30701	NM_007662	12555	Mm.1976	NM_007662	ENSMUSG00000031962	Cdh15	AI323380|Cdh14|Mcad	cadherin 15	protein-coding
common_peak2-27803-23-26--0.0331199976543877-0.301029995663988	chr3	142765161	142765909	+	0	NA	Intergenic	Intergenic	-140484	NR_040551	320072	Mm.136397	NR_040551		A830019L24Rik	-	RIKEN cDNA A830019L24 gene	ncRNA
unique_peak1-7011-8-3-1.00522241794757-1.39487600375387	chr8	123805372	123805733	+	0	NA	Intergenic	(CATA)n|Simple_repeat|Simple_repeat	153967	NM_008024	14241	Mm.5111	NM_008024	ENSMUSG00000097084	Foxl1	FREAC7|Fkh6|fkh-6	forkhead box L1	protein-coding
common_peak1-11891-9-11--0.395349094316936-0.344532117358383	chr16	97921889	97922382	+	0	NA	Intergenic	Intergenic	63227	NM_023663	72388	Mm.35290	NM_023663	ENSMUSG00000005251	Ripk4	2310069J12Rik|AI552420|ANKK2|Ankrd3|DIk|PKK|RIP4	receptor-interacting serine-threonine kinase 4	protein-coding
common_peak2-23170-17-11-0.633333837483882-0.769930178837768	chr15	89128605	89129248	+	0	NA	intron (NM_001170561, intron 28 of 40)	intron (NM_001170561, intron 28 of 40)	7237	NR_105924	102465981		NR_105924		Mir6959	mmu-mir-6959	microRNA mir-6959	ncRNA
common_peak1-13314-26-12-1.22745937401737-2.03163221100073	chr19	42126681	42127750	+	0	NA	exon (NM_025752, exon 1 of 1)	exon (NM_025752, exon 1 of 1)	497	NM_025752	66765	Mm.440412	NM_025752	ENSMUSG00000090369	4933411K16Rik	-	RIKEN cDNA 4933411K16 gene	protein-coding
common_peak2-31882-24-48--0.821499941347492-1.45748092439676	chr9	56041826	56042682	+	0	NA	Intergenic	Intergenic	-33377	NM_019793	56434	Mm.28484	NM_019793	ENSMUSG00000032324	Tspan3	1700055K04Rik|TM4-A|Tm4sf8	tetraspanin 3	protein-coding
common_peak1-18569-23-19-0.399839409621718-0.538442145997695	chr8	105593677	105594738	+	0	NA	Intergenic	L1MA6|LINE|L1	277227	NR_036588	69794	Mm.396139	NR_036588		1600027J07Rik	-	RIKEN cDNA 1600027J07 gene	ncRNA
common_peak2-27923-7-10--0.660340788339108-1.12966497611638	chr4	11966609	11967069	+	0	NA	non-coding (NR_110955, exon 29 of 29)	non-coding (NR_110955, exon 29 of 29)	48265	NM_177861	329795	Mm.475125	NM_177861	ENSMUSG00000049488	Tmem67	5330408M12Rik|B230117O07|b2b1163.1Clo|b2b1291.1Clo	transmembrane protein 67	protein-coding
unique_peak2-38534-14-25--0.801223557783447-0.84969927174089	chr7	46839220	46840601	+	0	NA	Intergenic	RMER6A|LTR|ERVK	66774	NM_001004139	70227	Mm.333800	NM_001004139	ENSMUSG00000068959	Zfp619	3000002G13Rik	zinc finger protein 619	protein-coding
common_peak2-19531-11-11--0.0762689164695427-0.301029995663976	chr1	75218320	75218973	+	0	NA	intron (NM_001243090, intron 2 of 2)	BGLII|LTR|ERVK	1583	NM_001243091	381272	Mm.239588	NM_001243090	ENSMUSG00000096094	A630095N17Rik	Gm1624	RIKEN cDNA A630095N17 gene	protein-coding
unique_peak2-37769-2-11--2.50241675698448-2.32232533660526	chr5	115348620	115349118	+	0	NA	intron (NM_011854, intron 1 of 5)	intron (NM_011854, intron 1 of 5)	1926	NM_011854	23962	Mm.228363	NM_011854	ENSMUSG00000029561	Oasl2	M1204|Mmu-OASL|Oasl	2'-5' oligoadenylate synthetase-like 2	protein-coding
unique_peak1-5301-12-3-1.64877598508764-2.36932189928148	chr5	74195374	74195994	+	0	NA	Intergenic	RMER1A|Other|Other	153065	NM_178387	73472	Mm.87067	NM_178387	ENSMUSG00000029155	Spata18	1700067I02Rik	spermatogenesis associated 18	protein-coding
common_peak2-29025-30-36--0.039777956137077-0.301029995663973	chr5	113734806	113736205	+	0	NA	intron (NM_172718, intron 2 of 24)	HAL1-2a_MD|LINE|L1	4301	NM_001254731	52850	Mm.200203	NM_172718	ENSMUSG00000042216	Sgsm1	2410098H20Rik|AA408781|D5Bwg1524e|E130107M15|NuIP|Rutbc2	small G protein signaling modulator 1	protein-coding
unique_peak2-34904-8-10--0.454209200689727-1.078512453669	chr15	83122326	83122725	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	-40321	NM_001004150	239559	Mm.323805	NM_001004150	ENSMUSG00000047878	A4galt	-	alpha 1,4-galactosyltransferase	protein-coding
unique_peak2-38888-9-8-0.0196884049619079-1.03275496310833	chr8	5003538	5003924	+	0	NA	Intergenic	MERVL_2A-int|LTR|ERVL	101501	NM_011388	20494	Mm.3500	NM_011388	ENSMUSG00000023073	Slc10a2	ASBT|ISBT	solute carrier family 10, member 2	protein-coding
common_peak2-31713-30-54--0.611684304032787-1.08805681394569	chr9	89210840	89211673	+	0	NA	Intergenic	L1ME1|LINE|L1	105228	NM_026829	107885	Mm.486274	NM_026829	ENSMUSG00000066442	Mthfs	1110034I12Rik|2310020H23Rik|AI119695	5, 10-methenyltetrahydrofolate synthetase	protein-coding
common_peak2-20555-19-28--0.455293668465885-0.518921928796332	chr10	69924983	69926312	+	0	NA	intron (NM_024244, intron 3 of 13)	MIR|SINE|MIR	21989	NM_001143776	71721	Mm.477813	NM_024244	ENSMUSG00000043259	Fam13c	1200015N20Rik|C030038O19Rik|mKIAA1796	family with sequence similarity 13, member C	protein-coding
common_peak2-28577-17-85--2.20796841649706-10.1336093614635	chr5	9100411	9101572	+	0	NA	intron (NM_001081029, intron 1 of 4)	CpG	254	NM_001081029	652925	Mm.439954	NM_001081029	ENSMUSG00000079659	Tmem243	4930420K17Rik|E030031F02Rik	transmembrane protein 243, mitochondrial	protein-coding
unique_peak2-39234-3-6--1.22133801201688-1.08602067057793	chr8	111393446	111393855	+	0	NA	intron (NM_007496, intron 4 of 9)	intron (NM_007496, intron 4 of 9)	-67110	NR_037295	100526511		NR_037295		Mir3108	mmu-mir-3108	microRNA 3108	ncRNA
common_peak1-12817-37-57--0.331987923641753-0.556612435105728	chr18	67774695	67775549	+	0	NA	Intergenic	ID_B1|SINE|B4	25868	NM_001081073	225659	Mm.111928	NM_001081073	ENSMUSG00000073542	Cep76	6230425F05Rik|9630013E05	centrosomal protein 76	protein-coding
common_peak2-32215-34-30-0.427872216614391-0.737357778720995	chr9	121759384	121760468	+	0	NA	intron (NM_019814, intron 2 of 3)	RSINE1|SINE|B4	7192	NM_019814	56295	Mm.347915	NM_019814	ENSMUSG00000038412	Higd1a	2210020B17Rik|7420700H20Rik|AI303276|AW049839|HIMP1|Hig1	HIG1 domain family, member 1A	protein-coding
unique_peak2-39629-0-6--3.64748585253182-1.56314192529759	chr9	98490274	98490695	+	0	NA	exon (NM_025485, exon 7 of 8)	exon (NM_025485, exon 7 of 8)	11614	NM_025485	64655	Mm.17949	NM_025485	ENSMUSG00000032459	Mrps22	3100002P07Rik|Rpms22	mitochondrial ribosomal protein S22	protein-coding
common_peak1-7667-24-12-1.09277018462662-1.73042999925837	chr1	75210356	75211509	+	0	NA	TTS (NM_009447)	TTS (NM_009447)	3528	NM_011494	20872	Mm.1155	NM_011494	ENSMUSG00000026201	Stk16	EDPK|Krct|MPSK|PKL12|TSF-1	serine/threonine kinase 16	protein-coding
common_peak2-20809-14-16--0.188246680892695-0.308035960714963	chr10	127289832	127290531	+	0	NA	intron (NM_147222, intron 1 of 3)	Lx7|LINE|L1	3197	NM_147222	216453	Mm.222953	NM_147222	ENSMUSG00000054052	Rdh19	RDH-S|RDH-S2|Rdhs	retinol dehydrogenase 19	protein-coding
unique_peak1-4599-12-1-2.64877598508764-3.36932189928148	chr3	60602269	60602862	+	0	NA	Intergenic	Intergenic	-204142	NM_008772	18441	Mm.281452	NM_008772	ENSMUSG00000027765	P2ry1	P2Y1	purinergic receptor P2Y, G-protein coupled 1	protein-coding
common_peak2-29078-88-149--0.213406281325348-0.613742147057493	chr5	118559492	118561046	+	0	NA	intron (NM_172721, intron 5 of 10)	intron (NM_172721, intron 5 of 10)	45198	NM_172721	231672	Mm.221769	NM_172721	ENSMUSG00000032867	Fbxw8	4930438M06Rik|FBW6|FBW8|FBXO29|Fbx29	F-box and WD-40 domain protein 8	protein-coding
common_peak1-11953-148-270--0.164894913711751-0.633702646188034	chr17	5840600	5842410	+	0	NA	5' UTR (NM_025664, exon 1 of 18)	5' UTR (NM_025664, exon 1 of 18)	125	NM_025664	66616	Mm.89515	NM_025664	ENSMUSG00000002365	Snx9	2700073N08Rik|SDP1|SH3PX1	sorting nexin 9	protein-coding
common_peak2-19930-11-11--0.0762689164695427-0.301029995663976	chr1	127257287	127257770	+	0	NA	Intergenic	L1Md_A|LINE|L1	74776	NM_023735	74117	Mm.183102	NM_023735	ENSMUSG00000026341	Actr3	1200003A09Rik|Arp3	ARP3 actin-related protein 3	protein-coding
common_peak2-23121-32-43--0.180339599417637-0.343417008601348	chr14	99298583	99299552	+	0	NA	Intergenic	Intergenic	146288	NM_175245	76789	Mm.38912	NM_175245	ENSMUSG00000033186	Mzt1	2410129H14Rik|AI120158|Mozart1	mitotic spindle organizing protein 1	protein-coding
common_peak1-15479-10-6-0.549060422951165-1.21398586181642	chr4	108300715	108301221	+	0	NA	intron (NM_177045, intron 15 of 24)	intron (NM_177045, intron 15 of 24)	8407	NM_177045	319965	Mm.151129	NM_177045	ENSMUSG00000028582	Cc2d1b	A830039B04Rik|Freud2	coiled-coil and C2 domain containing 1B	protein-coding
common_peak2-29705-7-10--0.660340788339108-1.12966497611638	chr6	83121079	83121412	+	0	NA	intron (NM_001198866, intron 1 of 31)	intron (NM_001198866, intron 1 of 31)	5327	NM_001198867	13191	Mm.6919	NM_007835	ENSMUSG00000031865	Dctn1	AL022633|Glued|p150|p150<glued>	dynactin 1	protein-coding
unique_peak1-1670-9-3-1.18961340640422-1.57096726280955	chr13	67754649	67755139	+	0	NA	Intergenic	MTA_Mm-int|LTR|MaLR	-16204	NM_183146	212281	Mm.342918	NM_183146	ENSMUSG00000021510	A530054K11Rik	Rslcan3	RIKEN cDNA A530054K11 gene	protein-coding
unique_peak1-5987-9-4-0.867685311516858-1.36011389749466	chr6	98919443	98919949	+	0	NA	intron (NM_053202, intron 10 of 18)	intron (NM_053202, intron 10 of 18)	58596	NM_001197322	108655	Mm.234965	NM_053202	ENSMUSG00000030067	Foxp1	3110052D19Rik|4932443N09Rik|AI461938|AW494214	forkhead box P1	protein-coding
common_peak2-27805-20-16-0.400611943340854-0.507611860039817	chr3	144198490	144199135	+	0	NA	intron (NM_011828, intron 1 of 6)	RCHARR1|DNA|MER1_type	34368	NM_011828	23908	Mm.12863	NM_011828	ENSMUSG00000040151	Hs2st1	AW214369|Hs2st|mKIAA0448	heparan sulfate 2-O-sulfotransferase 1	protein-coding
common_peak2-23198-30-20-0.777357986713112-1.30767018140166	chr15	85655409	85656204	+	0	NA	Intergenic	Intergenic	-3643	NM_011105	18766	Mm.89965	NM_011105	ENSMUSG00000052496	Pkdrej	-	polycystic kidney disease (polycystin) and REJ (sperm receptor for egg jelly homolog, sea urchin)	protein-coding
unique_peak2-35401-3-7--1.41398308995928-1.23214870625617	chr17	32091020	32091379	+	0	NA	intron (NM_028902, intron 7 of 7)	intron (NM_028902, intron 7 of 7)	80254	NM_028902	74377	Mm.75856	NM_028902	ENSMUSG00000002076	Hsf2bp	4932437G14Rik	heat shock transcription factor 2 binding protein	protein-coding
common_peak2-21132-24-34--0.33607311417725-0.427313034957882	chr11	54061176	54062104	+	0	NA	intron (NM_009969, intron 3 of 3)	intron (NM_009969, intron 3 of 3)	1761	NM_009969	12981	Mm.4922	NM_009969		Csf2	Csfgm|GMCSF|Gm-CSf|MGI-IGM	colony stimulating factor 2 (granulocyte-macrophage)	protein-coding
common_peak2-21372-130-167-0.299613660051101-1.23178134224162	chr11	78369073	78371791	+	0	NA	Intergenic	B2_Mm1a|SINE|B2	-6195	NM_133706	69071	Mm.29431	NM_133706	ENSMUSG00000037278	Tmem97	1810014L12Rik|AI115531|AL022956|D11Bhm182e	transmembrane protein 97	protein-coding
unique_peak2-36951-2-14--2.82434485187184-3.03832868024006	chr3	108186256	108186852	+	0	NA	promoter-TSS (NM_019976)	promoter-TSS (NM_019976)	105	NR_040560	100038453	Mm.214328	NR_040560	ENSMUSG00000074281	Gm12522	OTTMUSG00000007300	predicted gene 12522	ncRNA
unique_peak1-4426-14-3-1.89921616035764-2.80787975886178	chr2	168065731	168066473	+	0	NA	Intergenic	RMER12B|LTR|ERVK	9980	NM_001160330	69372	Mm.482182	NM_001160330	ENSMUSG00000074576	Mocs3	1700020H17Rik|Uba4	molybdenum cofactor synthesis 3	protein-coding
unique_peak2-39045-8-8--0.164702583494742-1.00793137938329	chr8	70513989	70514423	+	0	NA	Intergenic	Intergenic	-15733	NM_177698	234353	Mm.32525	NM_027626	ENSMUSG00000030465	Psd3	4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D	pleckstrin and Sec7 domain containing 3	protein-coding
unique_peak1-295-12-3-1.64877598508764-2.36932189928148	chr1	125449167	125449817	+	0	NA	intron (NM_199021, intron 5 of 25)	intron (NM_199021, intron 5 of 25)	492644	NM_199021	269109	Mm.483255	NM_199021	ENSMUSG00000036815	Dpp10	6430601K09Rik|DPP X|Dprp3	dipeptidylpeptidase 10	protein-coding
unique_peak1-1436-13-2-2.19350952991661-3.03832868024006	chr12	96922564	96923140	+	0	NA	Intergenic	Intergenic	-7584	NM_201518	399558	Mm.341948	NM_201518	ENSMUSG00000047414	Flrt2	-	fibronectin leucine rich transmembrane protein 2	protein-coding
common_peak1-18294-7-11--0.785871670422967-1.21681515183528	chr8	45562210	45562721	+	0	NA	Intergenic	Intergenic	-473097	NM_001081286	14107	Mm.27365	NM_001081286	ENSMUSG00000070047	Fat1	2310038E12Rik|AU023433|Fath|mFat1	FAT tumor suppressor homolog 1 (Drosophila)	protein-coding
unique_peak1-7073-35-2-3.84640775774135-10.2940202619029	chr9	17732650	17733624	+	0	NA	Intergenic	(GAAA)n|Simple_repeat|Simple_repeat	-363574	NM_025844	66917	Mm.103534	NM_025844	ENSMUSG00000001774	Chordc1	1110001O09Rik|AA409036|Chp-1|morgana	cysteine and histidine-rich domain (CHORD)-containing, zinc-binding protein 1	protein-coding
unique_peak1-5440-10-3-1.35641534500877-1.75805390616669	chr5	116007482	116007936	+	0	NA	Intergenic	Intergenic	-1767	NM_007475	11837	Mm.5286	NM_007475	ENSMUSG00000067274	Rplp0	36B4|Arbp|L10E	ribosomal protein, large, P0	protein-coding
common_peak2-30862-22-18-0.399356591643819-0.549581527953406	chr7	139273428	139274186	+	0	NA	intron (NM_018867, intron 4 of 13)	intron (NM_018867, intron 4 of 13)	72617	NM_018867	55987	Mm.471654	NM_018867	ENSMUSG00000030862	Cpxm2	4632435C11Rik|CPX-2|Cpx2	carboxypeptidase X 2 (M14 family)	protein-coding
common_peak2-22890-37-29-0.6191024758773-1.14508711250721	chr14	32049243	32050223	+	0	NA	Intergenic	B2_Mm2|SINE|B2	14671	NM_027949	71838	Mm.5348	NM_027949	ENSMUSG00000021902	Phf7	1700006H01Rik|1700010P14Rik|AI427892|AW555949	PHD finger protein 7	protein-coding
unique_peak2-39330-2-8--2.08737925770563-1.65811743852845	chr8	126834625	126835072	+	0	NA	intron (NM_139272, intron 3 of 15)	ID4|SINE|ID	79554	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
unique_peak1-5856-11-4-1.18676548936425-1.68134727924692	chr6	84212715	84213242	+	0	NA	Intergenic	Intergenic	160854	NR_046063	100038556	Mm.387783	NR_046063		Gm10445	ENSMUSG00000072956	predicted gene 10445	ncRNA
common_peak1-9395-10-9-0.0344872501214071-1.05503135781948	chr11	100013736	100014251	+	0	NA	Intergenic	Intergenic	-6760	NM_008471	16669	Mm.439699	NM_008471	ENSMUSG00000020911	Krt19	AI663979|EndoC|K19|Krt-1.19|Krt1-19	keratin 19	protein-coding
common_peak2-26527-26-15-0.927899092158462-1.40782320807777	chr2	91194593	91195255	+	0	NA	intron (NM_175123, intron 3 of 8)	B4A|SINE|B4	89652	NM_023854	77038	Mm.43636	NM_023854	ENSMUSG00000027255	Arfgap2	2310032E02Rik|Zfp289	ADP-ribosylation factor GTPase activating protein 2	protein-coding
common_peak1-9800-20-15-0.488074784591193-0.590343908676236	chr12	69183397	69184203	+	0	NA	Intergenic	ID4_|SINE|ID	-413542	NR_033146	100316870	Mm.379794	NR_033146		Gm17821	-	DDB1 and CUL4 associated factor 5 pseudogene	pseudo
unique_peak1-3861-15-3-2.01216475055566-3.03427613622886	chr2	7089143	7089939	+	0	NA	intron (NM_001110231, intron 3 of 15)	intron (NM_001110231, intron 3 of 15)	-87193	NM_001160292	14007	Mm.398543	NM_010160	ENSMUSG00000002107	Celf2	B230218O03|B230345P09Rik|C88023|CELF-2|CUG-BP2|Cugbp2|D230046B21Rik|Etr-3|Napor|Napor-2|mETR-3	CUGBP, Elav-like family member 2	protein-coding
common_peak1-12149-50-45-0.517378360421939-1.16897173470069	chr17	28177001	28177969	+	0	NA	intron (NM_181413, intron 13 of 24)	intron (NM_181413, intron 13 of 24)	40044	NM_013687	21463	Mm.29758	NM_013687	ENSMUSG00000062859	Tcp11	D17Ken1|Tcp-11	t-complex protein 11	protein-coding
unique_peak2-37250-4-7--1.02346051385325-1.09384600808989	chr4	101132737	101133067	+	0	NA	intron (NM_001177602, intron 3 of 5)	intron (NM_001177602, intron 3 of 5)	-36351	NM_198412	72685	Mm.76494	NM_198412	ENSMUSG00000028528	Dnajc6	2810027M23Rik|mKIAA0473	DnaJ (Hsp40) homolog, subfamily C, member 6	protein-coding
unique_peak2-39341-9-14--0.717277189204299-0.53895475198017	chr9	25591077	25591837	+	0	NA	Intergenic	RLTR1|LTR|ERV1	302275	NM_026189	67484	Mm.112977	NM_026189	ENSMUSG00000036611	Eepd1	2310005P05Rik|AI481005	endonuclease/exonuclease/phosphatase family domain containing 1	protein-coding
unique_peak1-3558-30-2-3.58471290877072-8.33734317840678	chr19	24994250	24995595	+	0	NA	non-coding (NR_033744, exon 15 of 15)	non-coding (NR_033744, exon 15 of 15)	-19123	NM_008022	14237	Mm.377080	NM_008022	ENSMUSG00000051490	Foxd4	FREAC5|Fkh2	forkhead box D4	protein-coding
common_peak1-18166-25-18-0.613922391901521-0.86528749982161	chr8	13648336	13649234	+	0	NA	intron (NM_009025, intron 1 of 23)	intron (NM_009025, intron 1 of 23)	28802	NM_009025	19414	Mm.18517	NM_009025	ENSMUSG00000031453	Rasa3	AI326412|C86362|E130011G04|GAPIII|scat	RAS p21 protein activator 3	protein-coding
common_peak2-25764-10-8-0.186490343566457-1.078512453669	chr19	32106976	32107438	+	0	NA	intron (NM_018830, intron 10 of 23)	intron (NM_018830, intron 10 of 23)	70423	NM_018830	54447	Mm.491229	NM_018830	ENSMUSG00000024887	Asah2	AI585898	N-acylsphingosine amidohydrolase 2	protein-coding
unique_peak2-32523-9-8-0.0196884049619079-1.03275496310833	chr1	59685056	59685586	+	0	NA	intron (NM_001013771, intron 16 of 19)	intron (NM_001013771, intron 16 of 19)	42357	NM_009460	22218	Mm.362118	NM_009460	ENSMUSG00000026021	Sumo1	GMP1|PIC1|SENTRIN|SMT3|SMT3H3|SMTP3|SUMO-1|Smt3C|Ubl1	SMT3 suppressor of mif two 3 homolog 1 (yeast)	protein-coding
unique_peak1-6775-8-0-3.00522241794757-2.70926996097583	chr8	62002822	62003329	+	0	NA	Intergenic	Intergenic	612523	NM_173411	234290	Mm.39244	NM_173411	ENSMUSG00000049946	BC030500	-	cDNA sequence BC030500	protein-coding
unique_peak2-33294-17-25--0.482143379936054-0.479250674391597	chr11	118438764	118440059	+	0	NA	intron (NM_001285436, intron 3 of 13)	intron (NM_001285436, intron 3 of 13)	101137	NM_172573	217364	Mm.473963	NM_172573	ENSMUSG00000033857	Engase	C130099A03|D230014K01Rik	endo-beta-N-acetylglucosaminidase	protein-coding
unique_peak1-3992-9-2-1.60465090568306-1.87199725847353	chr2	35131312	35131816	+	0	NA	intron (NM_001206367, intron 2 of 17)	L1MB3|LINE|L1	-6336	NM_146120	227753	Mm.21109	NM_146120	ENSMUSG00000026879	Gsn	ADF	gelsolin	protein-coding
unique_peak2-35860-9-17--0.980311595038092-0.844317084070804	chr18	76034690	76035379	+	0	NA	intron (NM_145356, intron 1 of 4)	L1_Mus1|LINE|L1	55202	NM_145356	207259	Mm.159332	NM_145356	ENSMUSG00000044646	Zbtb7c	B230208J24Rik|Kr-pok|Zbtb36	zinc finger and BTB domain containing 7C	protein-coding
common_peak1-15745-10-5-0.771452844287613-1.33892459842472	chr4	149170430	149170954	+	0	NA	Intergenic	Intergenic	-22316	NM_027460	70556	Mm.41877	NM_027460	ENSMUSG00000028982	Slc25a33	5730438N18Rik|Pnc1	solute carrier family 25, member 33	protein-coding
common_peak1-15133-12-18--0.599151528355947-0.476916024233333	chr3	142439700	142440364	+	0	NA	intron (NM_145546, intron 2 of 6)	intron (NM_145546, intron 2 of 6)	11821	NM_145546	229906	Mm.271756	NM_145546	ENSMUSG00000028271	Gtf2b	-	general transcription factor IIB	protein-coding
common_peak2-21278-12-13--0.158578936969966-0.301029995663979	chr11	69995892	69996574	+	0	NA	Intergenic	Intergenic	16108	NM_010796	17312	Mm.252405	NM_010796	ENSMUSG00000000318	Clec10a	CD301a|M-ASGP-BP-1|Mgl|Mgl1	C-type lectin domain family 10, member A	protein-coding
unique_peak2-32708-4-9--1.34538860874061-1.36011389749466	chr1	153269136	153269618	+	0	NA	intron (NM_025819, intron 2 of 19)	intron (NM_025819, intron 2 of 19)	6188	NM_025819	66875	Mm.290905	NM_025819	ENSMUSG00000052748	Swt1	1200016B10Rik|C1orf26	SWT1 RNA endoribonuclease homolog (S. cerevisiae)	protein-coding
unique_peak1-699-11-1-2.50869358425161-2.83420869758413	chr10	80489713	80490357	+	0	NA	Intergenic	Intergenic	-1913	NM_145217	208666	Mm.44995	NM_145217	ENSMUSG00000043670	Diras1	Di-Ras1|Gbts1|RIG	DIRAS family, GTP-binding RAS-like 1	protein-coding
common_peak1-13405-72-47-1.08362131215116-4.81556219886265	chr19	47730441	47731748	+	0	NA	intron (NM_001290825, intron 35 of 53)	intron (NM_001290825, intron 35 of 53)	35438	NM_007732	12821	Mm.1225	NM_007732	ENSMUSG00000025064	Col17a1	BP180|Bpag|Bpag2	collagen, type XVII, alpha 1	protein-coding
common_peak1-10720-21-22-0.0459273092092225-0.319918318021793	chr14	62332008	62332801	+	0	NA	Intergenic	Intergenic	-31194	NR_028264	668253	Mm.32886	NR_028264	ENSMUSG00000097589	Dleu2	1810047A16Rik|4932411A06Rik|7730401J12Rik|AI197277|AI788824|Alt1|Gm9069|Leu2	deleted in lymphocytic leukemia, 2	ncRNA
unique_peak2-35980-5-9--1.02630843089322-1.21398586181642	chr19	24514373	24514614	+	0	NA	intron (NM_008846, intron 2 of 14)	intron (NM_008846, intron 2 of 14)	37471	NM_026520	68034	Mm.440181	NM_026520		Fam122a	2410124L17Rik|2900009I07Rik|ENSMUSG00000051082|Gm9849	family with sequence similarity 122, member A	protein-coding
common_peak2-23752-12-7-0.648775985087639-0.697979855752659	chr15	97832433	97832877	+	0	NA	intron (NM_031163, intron 1 of 53)	CpG	2500	NM_031163	12824	Mm.2423	NM_031163	ENSMUSG00000022483	Col2a1	Col2|Col2a|Col2a-1|Del1|Dmm|Lpk|M100856|Rgsc856	collagen, type II, alpha 1	protein-coding
common_peak1-19376-30-54--0.611684304032787-1.08805681394569	chrX	36598001	36599092	+	0	NA	Intergenic	Intergenic	-100897	NM_001177380	78631	Mm.243738	NM_001177380	ENSMUSG00000079619	Cypt15	1700085A12Rik	cysteine-rich perinuclear theca 15	protein-coding
common_peak2-29986-26-18-0.679971578714877-0.959433126956265	chr6	122308829	122309612	+	0	NA	Intergenic	ORR1B1|LTR|MaLR	-18975	NM_001271579	13619	Mm.6822	NM_007905	ENSMUSG00000040669	Phc1	AW557034|Edr|Edr1|Mph1|Rae-28|rae28	polyhomeotic-like 1 (Drosophila)	protein-coding
unique_peak2-32691-4-4--0.345388608740609-0.864171920961574	chr1	143729046	143729450	+	0	NA	Intergenic	L1_Mm|LINE|L1	-1176269	NR_040604	75910	Mm.483845	NR_040604		4930590L20Rik	-	RIKEN cDNA 4930590L20 gene	ncRNA
common_peak1-8839-8-11--0.579740082773585-1.14218153353838	chr11	28907553	28908093	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-122928	NM_027869	71701	Mm.211131	NM_027869	ENSMUSG00000020464	Pnpt1	1200003F12Rik|Old35|PNPase|Pnptl1	polyribonucleotide nucleotidyltransferase 1	protein-coding
unique_peak1-2413-10-5-0.771452844287613-1.33892459842472	chr15	99544166	99544689	+	0	NA	TTS (NM_031842)	TTS (NM_031842)	-3597	NM_010271	14555	Mm.252391	NM_010271	ENSMUSG00000023019	Gpd1	AI747587|Gdc-1|Gdc1|mKIAA4010	glycerol-3-phosphate dehydrogenase 1 (soluble)	protein-coding
common_peak2-25281-21-12-0.869049547125143-1.18646456559501	chr18	69303298	69303840	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-121642	NR_105780	102465187		NR_105780	miRBase:MI0021890	Mir145b	mmu-mir-145b	microRNA mir-145b	ncRNA
common_peak2-26637-10-10--0.103016273628528-0.301029995663987	chr2	119351049	119351723	+	0	NA	intron (NM_172857, intron 10 of 12)	B4A|SINE|B4	21977	NM_172857	241624	Mm.212773	NM_172857	ENSMUSG00000048647	Exd1	4932702D22Rik|Exdl1	exonuclease 3'-5' domain containing 1	protein-coding
common_peak1-13033-45-37-0.612430511901287-1.31742449843083	chr19	5566941	5568454	+	0	NA	promoter-TSS (NM_001033448)	promoter-TSS (NM_001033448)	-377	NM_001033448	381201	Mm.441906	NM_001033448	ENSMUSG00000049562	Ap5b1	Gm962	adaptor-related protein complex 5, beta 1 subunit	protein-coding
unique_peak1-5135-12-10-0.189344366450341-0.386243247519795	chr5	8417418	8417973	+	0	NA	intron (NM_001190717, intron 2 of 11)	RMER15|LTR|ERVL	5021	NM_013726	27214	Mm.292470	NM_013726	ENSMUSG00000002297	Dbf4	AA545217|Ask	DBF4 homolog (S. cerevisiae)	protein-coding
common_peak2-27081-20-32--0.55631933476726-0.705485015404196	chr3	52198710	52199809	+	0	NA	Intergenic	MTC|LTR|MaLR	127000	NM_019739	56458	Mm.29891	NM_019739	ENSMUSG00000044167	Foxo1	AI876417|Afxh|FKHR|Fkhr1|Foxo1a	forkhead box O1	protein-coding
unique_peak1-1014-7-1-1.79909083029819-1.80617997398389	chr11	74556700	74557149	+	0	NA	Intergenic	Intergenic	-19038	NM_013625	18472	Mm.397111	NM_013625	ENSMUSG00000020745	Pafah1b1	LIS-1|Lis1|MMS10-U|Mdsh|Ms10u|Pafaha	platelet-activating factor acetylhydrolase, isoform 1b, subunit 1	protein-coding
unique_peak2-37928-2-5--1.50241675698448-1.08602067057793	chr5	146252333	146252710	+	0	NA	Intergenic	Intergenic	-21929	NM_007820	13114	Mm.378905	NM_007820	ENSMUSG00000038656	Cyp3a16	-	cytochrome P450, family 3, subfamily a, polypeptide 16	protein-coding
common_peak2-24746-10-7-0.356415345008769-1.12966497611638	chr17	50634155	50634680	+	0	NA	Intergenic	Intergenic	-14455	NM_013880	224860	Mm.217362	NM_013880	ENSMUSG00000038910	Plcl2	PLC-L2|PRIP-2|Plce2|mKIAA1092	phospholipase C-like 2	protein-coding
common_peak2-25975-10-14--0.550475250599749-0.446472590016315	chr19	53531871	53532473	+	0	NA	intron (NR_028427, intron 2 of 9)	intron (NR_028427, intron 2 of 9)	7114	NR_028427	381232	Mm.248624	NR_028427	ENSMUSG00000097636	5830416P10Rik	4833407H14Rik|5430437C04Rik|ENSMUSG00000074788|Gm10758	RIKEN cDNA 5830416P10 gene	ncRNA
unique_peak2-32950-1-11--3.2120195109379-2.83420869758413	chr10	41440458	41440834	+	0	NA	intron (NM_001243074, intron 10 of 10)	intron (NM_001243074, intron 10 of 10)	88823	NM_001243075	103268	Mm.338605	NM_026643	ENSMUSG00000019813	Cep57l1	2410017P07Rik|4930484D11Rik|AI607327|cep57R	centrosomal protein 57-like 1	protein-coding
unique_peak2-33932-5-5--0.289342836727009-0.909929411522249	chr12	71871917	71872353	+	0	NA	Intergenic	Intergenic	-54366	NM_028127	319710	Mm.2962	NM_028127	ENSMUSG00000048285	Frmd6	2610019M19Rik|4930488L10Rik|AW212977	FERM domain containing 6	protein-coding
common_peak1-15332-37-17-1.35606807004351-3.31195702770221	chr4	46642664	46644359	+	0	NA	intron (NM_198664, intron 3 of 12)	Lx8|LINE|L1	19560	NM_198664	381605	Mm.331595	NM_198664	ENSMUSG00000039813	Tbc1d2	A630005A06Rik|BC022630|Gm1037|PARIS-1|PARIS1	TBC1 domain family, member 2	protein-coding
unique_peak1-268-8-2-1.42025991722641-1.65811743852845	chr1	93649511	93650003	+	0	NA	Intergenic	L1MEc|LINE|L1	-48297	NM_007855	13345	Mm.9474	NM_007855	ENSMUSG00000007805	Twist2	Dermo1|bHLHa39	twist basic helix-loop-helix transcription factor 2	protein-coding
common_peak2-30068-7-12--0.901348887842903-1.31827279259406	chr6	129230867	129231404	+	0	NA	Intergenic	MTD|LTR|MaLR	-5748	NM_001033122	12515	Mm.74745	NM_001033122	ENSMUSG00000030156	Cd69	5830438K24Rik|AI452015|AIM|VEA	CD69 antigen	protein-coding
unique_peak2-39595-5-5--0.289342836727009-0.909929411522249	chr9	77532662	77533092	+	0	NA	Intergenic	Intergenic	48338	NM_172925	244923	Mm.138238	NM_172925	ENSMUSG00000044938	Klhl31	9830147P19Rik|D930047P17Rik|Kbtbd1	kelch-like 31	protein-coding
unique_peak1-1778-12-3-1.64877598508764-2.36932189928148	chr14	120831959	120832713	+	0	NA	Intergenic	Intergenic	-45347	NM_029519	76108	Mm.261448	NM_029519	ENSMUSG00000051615	Rap2a	5830461H18Rik	RAS related protein 2a	protein-coding
common_peak1-16907-90-103-0.35386530780106-1.13137866467349	chr6	72438881	72440736	+	0	NA	Intergenic	Intergenic	-50256	NM_145569	232087	Mm.29815	NM_145569	ENSMUSG00000053907	Mat2a	D630045P18Rik	methionine adenosyltransferase II, alpha	protein-coding
common_peak2-31242-9-41--2.20270401637454-5.11635027252517	chr8	70506339	70507062	+	0	NA	Intergenic	Lx8|LINE|L1	-8227	NM_177698	234353	Mm.32525	NM_027626	ENSMUSG00000030465	Psd3	4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D	pleckstrin and Sec7 domain containing 3	protein-coding
common_peak2-21734-74-78-0.412105828801504-1.16922519370489	chr11	115070681	115072495	+	0	NA	intron (NM_001033393, intron 8 of 9)	intron (NM_001033393, intron 8 of 9)	22787	NM_001033393	320534	Mm.260587	NM_001033393	ENSMUSG00000045980	Tmem104	C630005D06Rik|mFLJ00021	transmembrane protein 104	protein-coding
unique_peak1-4270-11-4-1.18676548936425-1.68134727924692	chr2	132203415	132203906	+	0	NA	intron (NM_144944, intron 2 of 2)	intron (NM_144944, intron 2 of 2)	7523	NM_144944	246313	Mm.283777	NM_144944	ENSMUSG00000050558	Prokr2	B830005M06Rik|EG-VEGRF2|Gpcr73l1|Gpr73l1|PKR2	prokineticin receptor 2	protein-coding
common_peak2-24238-37-44-0.034139975156144-0.310681778627721	chr16	90283454	90285105	+	0	NA	5' UTR (NM_178923, exon 1 of 20)	5' UTR (NM_178923, exon 1 of 20)	391	NM_178923	224432	Mm.439811	NM_178923	ENSMUSG00000022983	Scaf4	AA517739|Sfrs15|Sra4|Srsf15	SR-related CTD-associated factor 4	protein-coding
unique_peak2-33228-5-6--0.511735258063458-0.947717972411649	chr10	120422566	120422957	+	0	NA	Intergenic	Intergenic	-6375	NM_001081193	380664	Mm.339371	NM_001081193	ENSMUSG00000048661	Lemd3	AI316861|Man1	LEM domain containing 3	protein-coding
unique_peak2-33579-8-6-0.197867495889966-1.03789460276074	chr11	86608546	86608861	+	0	NA	intron (NM_026191, intron 7 of 17)	intron (NM_026191, intron 7 of 17)	12459	NM_026191	67487	Mm.260627	NM_026191	ENSMUSG00000018425	Dhx40	2410016C14Rik|ARG147|DDX40|PAD	DEAH (Asp-Glu-Ala-His) box polypeptide 40	protein-coding
common_peak1-7886-12-10-0.189344366450341-0.386243247519795	chr1	134405735	134406329	+	0	NA	TTS (NM_177129)	TTS (NM_177129)	3225	NM_029025	74626	Mm.34611	NM_029025	ENSMUSG00000048174	Tmem81	4930429O20Rik|AI465369	transmembrane protein 81	protein-coding
common_peak1-14990-58-55-0.488595012832893-1.23949456788155	chr3	108013212	108014703	+	0	NA	promoter-TSS (NM_001289545)	promoter-TSS (NM_001289545)	-512	NM_175183	72522	Mm.187326	NM_175183	ENSMUSG00000048997	Atxn7l2	2610528J18Rik	ataxin 7-like 2	protein-coding
common_peak1-11569-11-11--0.0762689164695427-0.301029995663976	chr16	13437393	13437915	+	0	NA	Intergenic	Intergenic	-11962	NR_030549	100124432		NR_030549	miRBase:MI0005484	Mir193b	Mir193|Mirn193b	microRNA 193b	ncRNA
unique_peak2-39945-4-8--1.19338551529556-1.21878474469819	chrX	134585144	134585674	+	0	NA	intron (NM_030688, intron 2 of 10)	L1Md_A|LINE|L1	158710	NM_026469	67944	Mm.443280	NM_026469	ENSMUSG00000071686	Tex13a	1700025D03Rik	testis expressed 13A	protein-coding
unique_peak1-3231-14-5-1.31425365963649-1.4372489031793	chr18	60953891	60954689	+	0	NA	Intergenic	Intergenic	-9213	NM_001042605	16149	Mm.439737	NM_010545	ENSMUSG00000024610	Cd74	CLIP|DHLAG|HLADG|Ia-GAMMA|Ii	CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)	protein-coding
common_peak2-23669-50-34-0.911657299533986-2.56421248726208	chr15	85658069	85659001	+	0	NA	Intergenic	B4A|SINE|B4	-4199	NM_001033337	239570	Mm.151748	NM_001033337	ENSMUSG00000035944	Ttc38	9030019H09	tetratricopeptide repeat domain 38	protein-coding
common_peak2-27058-78-121--0.123916243402352-0.376537733660042	chr2	181286884	181288356	+	0	NA	TTS (NM_001271585)	TTS (NM_001271585)	-25565	NR_027289	100271841	Mm.438007	NR_027289	ENSMUSG00000010492	Uckl1os	Gm16119|OTTMUSG00000030649	uridine-cytidine kinase 1-like 1, opposite strand	ncRNA
common_peak1-7927-18-17-0.142994149786039-0.353907621462753	chr1	149846546	149847482	+	0	NA	Intergenic	Intergenic	1502197	NM_001145807	215378	Mm.441817	NM_153539	ENSMUSG00000035131	Brinp3	B830045N13Rik|Fam5c	bone morphogenetic protein/retinoic acid inducible neural specific 3	protein-coding
common_peak1-13381-25-38--0.423552313517143-0.564346534703877	chr19	46503127	46504233	+	0	NA	intron (NM_001025391, intron 3 of 11)	RMER6A|LTR|ERVK	32294	NM_015752	24069	Mm.41210	NM_015752	ENSMUSG00000025231	Sufu	Su(fu)	suppressor of fused homolog (Drosophila)	protein-coding
unique_peak2-38146-3-5--0.998945590680433-0.96108193396963	chr6	85843819	85844055	+	0	NA	Intergenic	Intergenic	8590	NM_001145895	75541	Mm.24454	NM_029331	ENSMUSG00000068299	1700019G17Rik	-	RIKEN cDNA 1700019G17 gene	protein-coding
unique_peak2-36470-1-7--2.62705701021674-1.80617997398389	chr2	144674002	144674404	+	0	NA	Intergenic	Lx|LINE|L1	24801	NM_025490	66328	Mm.45377	NM_025490	ENSMUSG00000027431	Scp2d1	1700010M22Rik	SCP2 sterol-binding domain containing 1	protein-coding
unique_peak2-38640-7-7--0.200909169701811-0.97990265578305	chr7	88198967	88199403	+	0	NA	Intergenic	PB1D10|SINE|Alu	-3301	NM_054085	116904	Mm.475768	NM_054085	ENSMUSG00000038763	Alpk3	AW319487|D330016D04|MAK|Midori|mKIAA1330	alpha-kinase 3	protein-coding
common_peak1-11813-14-22--0.624345795699369-0.590343908676233	chr16	64851957	64852529	+	0	NA	intron (NM_178647, intron 1 of 2)	CpG	332	NM_178647	106143	Mm.10160	NM_178647	ENSMUSG00000054604	Cggbp1	AA960172|AL023996|AW045841	CGG triplet repeat binding protein 1	protein-coding
common_peak1-12715-29-23-0.527327579893955-0.844067898188802	chr18	49832643	49833597	+	0	NA	Intergenic	L1Md_A|LINE|L1	82135	NM_026854	68857	Mm.96010	NM_026854	ENSMUSG00000024505	Dtwd2	1190002H09Rik|8030470C17Rik|AI414673|BB115449	DTW domain containing 2	protein-coding
common_peak2-21428-13-27--1.02888289141984-1.21173582416604	chr11	86201239	86202222	+	0	NA	Intergenic	Intergenic	-30703	NM_001080931	327987	Mm.341886	NM_001080931	ENSMUSG00000034297	Med13	1110067M05Rik|D030023K18|Thrap1|Trap240	mediator complex subunit 13	protein-coding
common_peak2-29959-7-6--0.00826409175941478-0.97990265578305	chr6	118151312	118151752	+	0	NA	Intergenic	Intergenic	-3770	NM_001080780	19713	Mm.57199	NM_009050	ENSMUSG00000030110	Ret	PTC|RET51|RET9|c-Ret	ret proto-oncogene	protein-coding
common_peak2-30081-8-5-0.420259917226415-1.10484139239135	chr6	134670244	134670468	+	0	NA	intron (NM_130447, intron 6 of 6)	intron (NM_130447, intron 6 of 6)	72290	NM_130447	70686	Mm.491182	NM_130447	ENSMUSG00000030203	Dusp16	3830417M17Rik|AW558566|D6Ertd213e|MKP-7|MKP7|Mkpm	dual specificity phosphatase 16	protein-coding
unique_peak2-34974-1-4--1.94898510510411-1.10720996964787	chr15	98614374	98614761	+	0	NA	Intergenic	ORR1A3|LTR|MaLR	-5721	NM_021279	22408	Mm.1123	NM_021279	ENSMUSG00000022997	Wnt1	Int-1|Wnt-1|sw|swaying	wingless-type MMTV integration site family, member 1	protein-coding
unique_peak1-3032-10-4-1.03448725012141-1.5150158574804	chr18	60751296	60751935	+	0	NA	promoter-TSS (NM_133363)	promoter-TSS (NM_133363)	-245	NM_133363	170947	Mm.159257	NM_133363		Myoz3	4833419K08Rik|Fatz-3	myozenin 3	protein-coding
common_peak1-14907-23-25-0.0213277863679888-0.30528805757448	chr3	96904789	96905601	+	0	NA	Intergenic	Intergenic	-57505	NM_019800	66659	Mm.101368	NM_019800	ENSMUSG00000028093	Acp6	5730559A09Rik|ACPL1|AU022842|mPACPL1	acid phosphatase 6, lysophosphatidic	protein-coding
common_peak1-9695-19-36--0.806766038967264-1.16836819221353	chr12	17881869	17882758	+	0	NA	Intergenic	RLTR6_Mm|LTR|ERV1	184693	NM_016677	53602	Mm.313619	NM_016677	ENSMUSG00000071379	Hpcal1	NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3	hippocalcin-like 1	protein-coding
common_peak1-18501-45-22-1.33679606928786-3.94835329416591	chr8	86445147	86446336	+	0	NA	intron (NM_181039, intron 3 of 22)	L1MB5|LINE|L1	21744	NM_181039	330814	Mm.260733	NM_181039	ENSMUSG00000013033	Lphn1	2900070I05Rik|AI182398|CLIBA|Lec2|mKIAA0821	latrophilin 1	protein-coding
unique_peak2-38577-2-6--1.72480917832092-1.26211192963361	chr7	66653811	66654221	+	0	NA	Intergenic	L1Md_T|LINE|L1	-74497	NR_015479	330544	Mm.9002	NR_015479		C230091D08Rik	-	RIKEN cDNA C230091D08 gene	ncRNA
common_peak2-30032-66-39-1.19655556953848-5.09341948656499	chr6	125432630	125433744	+	0	NA	intron (NM_007657, intron 1 of 7)	intron (NM_007657, intron 1 of 7)	11586	NM_007657	12527	Mm.210676	NM_007657	ENSMUSG00000030342	Cd9	Tspan29	CD9 antigen	protein-coding
common_peak2-30273-12-19--0.673152109799724-0.546772548767014	chr7	16294952	16295852	+	0	NA	Intergenic	Intergenic	-40317	NM_145709	252829	Mm.222738	NM_145709		Obox5	C87544	oocyte specific homeobox 5	protein-coding
common_peak2-23339-67-116--0.32595323680041-0.851766258064314	chr15	38469999	38471630	+	0	NA	Intergenic	Intergenic	-21793	NM_018745	54375	Mm.250214	NM_018745	ENSMUSG00000037458	Azin1	1700085L02Rik|AI414949|Oazi|Oazin	antizyme inhibitor 1	protein-coding
common_peak1-17478-24-22-0.269647946710704-0.457753417732779	chr7	24370037	24371125	+	0	NA	Intergenic	L1Md_F|LINE|L1	8377	NM_001166843	100043103	Mm.480300	NM_001166843	ENSMUSG00000094602	Vmn1r169	Gm4232	vomeronasal 1 receptor 169	protein-coding
common_peak2-31378-5-7--0.704380336005853-1.01466476204226	chr8	85119440	85119774	+	0	NA	Intergenic	L1Md_F2|LINE|L1	178418	NM_145600	30932	Mm.269248	NM_145600	ENSMUSG00000031711	Zfp330	BC008086|Noa36|Znf330	zinc finger protein 330	protein-coding
unique_peak1-5284-6-4-0.24347001549294-0.989110657569874	chr5	66139897	66140378	+	0	NA	Intergenic	RMER17C|LTR|ERVK	-14623	NM_001024917	333789	Mm.332398	NM_001024917	ENSMUSG00000037795	N4bp2	B3bp|E430014I16|Gm1791|Gm868	NEDD4 binding protein 2	protein-coding
unique_peak1-2454-32-14-1.37220142361114-2.96631085054195	chr15	102656042	102657285	+	0	NA	Intergenic	Intergenic	-79323	NR_104334	102216269		NR_104334		Cistr-act	Cistr	chondrogenic regulator lncRNA	ncRNA
unique_peak2-33234-1-8--2.79698201165906-2.05605744720049	chr10	120915342	120915910	+	0	NA	Intergenic	B2_Mm1a|SINE|B2	-2320	NM_138956	192678	Mm.41265	NM_138956	ENSMUSG00000025795	Rassf3	AW212023|AW322379	Ras association (RalGDS/AF-6) domain family member 3	protein-coding
common_peak1-14295-38-50--0.100972682672965-0.309893763698769	chr2	158409546	158410718	+	0	NA	Intergenic	Intergenic	26327	NR_040358	100045469	Mm.143404	NR_040358	ENSMUSG00000086496	Gm14204	OTTMUSG00000015935	predicted gene 14204	ncRNA
common_peak2-24542-25-11-1.27688740462395-2.12469164491494	chr17	27799547	27800103	+	0	NA	intron (NM_001286744, intron 1 of 9)	B1_Mur1|SINE|Alu	7289	NM_001286743	23969	Mm.4926	NM_011861	ENSMUSG00000040276	Pacsin1	A830061D09Rik|H74|mKIAA1379|syndapin	protein kinase C and casein kinase substrate in neurons 1	protein-coding
common_peak1-12937-14-9-0.577288065470282-0.630231561310125	chr19	9076264	9076963	+	0	NA	exon (NM_009643, exon 5 of 5)	exon (NM_009643, exon 5 of 5)	12839	NM_001286518	66395	Mm.203866	NM_009643	ENSMUSG00000069833	Ahnak	DY6	AHNAK nucleoprotein (desmoyokin)	protein-coding
common_peak2-25398-31-29-0.318348075204605-0.512115693271959	chr19	6061202	6062329	+	0	NA	exon (NM_013859, exon 1 of 1)	exon (NM_013859, exon 1 of 1)	558	NM_013859	29805	Mm.2310	NM_013859	ENSMUSG00000075227	Znhit2	C11orf5|Fon|ORF6|Znhit2-ps	zinc finger, HIT domain containing 2	protein-coding
unique_peak1-4342-13-1-2.77847203063777-3.64038867156802	chr2	153607864	153608603	+	0	NA	intron (NR_036629, intron 2 of 7)	B1_Mm|SINE|Alu	1618	NR_036629	100504221	Mm.246778	NM_177849	ENSMUSG00000044083	Efcab8	A630008I04|EG329541	EF-hand calcium binding domain 8	ncRNA
common_peak1-15700-48-53-0.216039649071346-0.488458446780741	chr4	139580345	139581437	+	0	NA	Intergenic	Intergenic	-56950	NM_173427	242721	Mm.60400	NM_173427	ENSMUSG00000078234	Klhdc7a	B230308G19Rik	kelch domain containing 7A	protein-coding
common_peak2-31775-19-25--0.297752391479405-0.376654945067947	chr9	22384934	22385900	+	0	NA	intron (NM_181316, intron 9 of 21)	intron (NM_181316, intron 9 of 21)	105258	NM_178415	319845	Mm.176725	NM_178415	ENSMUSG00000035919	Bbs9	E130103I17Rik	Bardet-Biedl syndrome 9 (human)	protein-coding
common_peak1-18011-72-91-0.145021856815305-0.437242741247042	chr7	141228077	141229360	+	0	NA	intron (NM_007400, intron 3 of 22)	intron (NM_007400, intron 3 of 22)	188062	NM_007400	11489	Mm.439714	NM_007400	ENSMUSG00000054555	Adam12	Mltna|mKIAA4001	a disintegrin and metallopeptidase domain 12 (meltrin alpha)	protein-coding
common_peak2-28507-45-71--0.30956697609744-0.585993193419137	chr5	30850117	30851423	+	0	NA	Intergenic	(TC)n|Simple_repeat|Simple_repeat	-2561	NM_028483	73259	Mm.443299	NM_028483	ENSMUSG00000053194	Cib4	1700041E20Rik	calcium and integrin binding family member 4	protein-coding
unique_peak2-35187-10-11--0.228547155712387-0.31137425193576	chr16	56075208	56075875	+	0	NA	promoter-TSS (NM_001003971)	promoter-TSS (NM_001003971)	19	NM_001003973	66315	Mm.255784	NM_025483	ENSMUSG00000052917	Senp7	2410152H17Rik|2810413I22Rik|2900036C23Rik|6030449K19Rik|AI790676|mKIAA1707	SUMO1/sentrin specific peptidase 7	protein-coding
common_peak1-14726-14-9-0.577288065470282-0.630231561310125	chr3	83992997	83993802	+	0	NA	intron (NM_030706, intron 6 of 11)	intron (NM_030706, intron 6 of 11)	14839	NR_036654	624713	Mm.442604	NR_036654		Gm6525	EG624713	ribosomal protein L36a pseudogene	pseudo
common_peak1-8133-8-13--0.802132504110034-0.562038191119711	chr1	189728335	189728800	+	0	NA	intron (NM_001243792, intron 2 of 7)	(CA)n|Simple_repeat|Simple_repeat	-93139	NM_011935	26381	Mm.89989	NM_011935	ENSMUSG00000026610	Esrrg	ERR3|Errg|NR3B3|mKIAA0832	estrogen-related receptor gamma	protein-coding
unique_peak1-1264-6-1-1.5653981103803-1.56314192529759	chr11	117101467	117101890	+	0	NA	intron (NM_001113486, intron 2 of 11)	intron (NM_001113486, intron 2 of 11)	-25882	NM_001113487	53860	Mm.38450	NM_017380	ENSMUSG00000059248	Sept9	MSF1|Msf|PNUTL4|Sint1	septin 9	protein-coding
common_peak1-16214-11-19--0.813234510635749-0.769930178837768	chr5	96804672	96805284	+	0	NA	intron (NM_175473, intron 1 of 73)	intron (NM_175473, intron 1 of 73)	2004	NM_175473	231470	Mm.291120	NM_175473	ENSMUSG00000034687	Fras1	E130113P14Rik|bl|mKIAA1500	Fraser syndrome 1 homolog (human)	protein-coding
common_peak1-16585-16-9-0.796335547380699-0.844317084070804	chr5	148362141	148362661	+	0	NA	Intergenic	Intergenic	120245	NM_028291	72587	Mm.320469	NM_028291	ENSMUSG00000029647	Pan3	2700050F09Rik|A430027N15Rik|AU014670	PAN3 polyA specific ribonuclease subunit homolog (S. cerevisiae)	protein-coding
common_peak1-15533-18-24--0.330937038546373-0.380101753845076	chr4	118542583	118543344	+	0	NA	TTS (NM_001011856)	TTS (NM_001011856)	1575	NM_001011856	258159	Mm.388910	NM_001011856	ENSMUSG00000073769	Olfr1331	MOR259-3P	olfactory receptor 1331	protein-coding
common_peak1-17283-21-16-0.482026424015896-0.650819692678078	chr6	135321337	135322257	+	0	NA	intron (NM_001288627, intron 1 of 4)	intron (NM_001288627, intron 1 of 4)	4286	NM_001288627	13730	Mm.182785	NM_010128	ENSMUSG00000030208	Emp1	I-8-09|TMP	epithelial membrane protein 1	protein-coding
common_peak2-30851-15-26--0.742722751607812-0.823046386575433	chr7	135605479	135606442	+	0	NA	promoter-TSS (NM_009383)	promoter-TSS (NM_009383)	-933	NM_009383	21843	Mm.242072	NM_009383	ENSMUSG00000030846	Tial1	5330433G13Rik|AL033329|TIAR|mTIAR	Tia1 cytotoxic granule-associated RNA binding protein-like 1	protein-coding
common_peak2-24092-69-109--0.186217266265928-0.452908205752178	chr16	31663243	31664805	+	0	NA	promoter-TSS (NM_007862)	promoter-TSS (NM_007862)	3	NM_001252434	13383	Mm.382	NM_007862	ENSMUSG00000022770	Dlg1	B130052P05Rik|Dlgh1|E-dlg/SAP97|SAP-97|SAP97|mKIAA4187	discs, large homolog 1 (Drosophila)	protein-coding
unique_peak2-35289-4-8--1.19338551529556-1.21878474469819	chr17	6919512	6919955	+	0	NA	exon (NM_183370, exon 7 of 13)	exon (NM_183370, exon 7 of 13)	9554	NM_183368	83672	Mm.442201	NM_031395	ENSMUSG00000041831	Sytl3	A430092N21|Slp3|Slp3-a|Slp3-b|mFLJ00307	synaptotagmin-like 3	protein-coding
unique_peak1-6863-21-8-1.39956426382392-2.11898024768848	chr8	87072358	87073268	+	0	NA	intron (NM_007578, intron 12 of 46)	intron (NM_007578, intron 12 of 46)	113938	NM_010499	15936	Mm.399	NM_010499	ENSMUSG00000053560	Ier2	AI317238|Ch1|Pip92	immediate early response 2	protein-coding
common_peak2-27875-22-43--0.812147513549893-1.34810744351377	chr4	15957860	15958676	+	0	NA	Intergenic	RLTR13A3|LTR|ERVK	-17244	NM_145950	209212	Mm.46455	NM_145950	ENSMUSG00000041153	Osgin2	BC010311|C230027H09Rik	oxidative stress induced growth inhibitor family member 2	protein-coding
unique_peak1-4142-10-2-1.77145284428761-2.09384600808989	chr2	92773807	92774328	+	0	NA	intron (NM_030725, intron 1 of 5)	intron (NM_030725, intron 1 of 5)	18809	NM_030725	80976	Mm.33490	NM_030725	ENSMUSG00000027220	Syt13	5730409J20Rik|AI549909|mKIAA1427	synaptotagmin XIII	protein-coding
unique_peak2-35138-3-10--1.87341470859657-1.75805390616669	chr16	30736694	30737239	+	0	NA	Intergenic	Intergenic	137157	NM_177632	224093	Mm.28244	NM_177632	ENSMUSG00000046546	Fam43a	Tuf1	family with sequence similarity 43, member A	protein-coding
common_peak1-12890-96-118-0.271233451047385-0.862226257692557	chr18	80468662	80470600	+	0	NA	3' UTR (NM_001164424, exon 4 of 4)	3' UTR (NM_001164424, exon 4 of 4)	16586	NM_001164423	66943	Mm.29247	NM_025861	ENSMUSG00000034006	Pqlc1	2310009N05Rik|4933425L21Rik|5730564E11Rik|C78974	PQ loop repeat containing 1	protein-coding
common_peak2-31324-16-21--0.341167976369236-0.392630012299441	chr8	81014105	81014967	+	0	NA	Intergenic	Intergenic	18291	NM_001252089	19656	Mm.24718	NM_009033	ENSMUSG00000037070	Rbmxl1	Hnrpg|Rbmx|Rbmxrt	RNA binding motif protein, X linked-like-1	protein-coding
common_peak1-15865-35-128--1.57985699696075-9.89684408199581	chr5	4757183	4758239	+	0	NA	5' UTR (NM_021457, exon 1 of 1)	5' UTR (NM_021457, exon 1 of 1)	505	NM_021457	14362	Mm.246003	NM_021457	ENSMUSG00000044674	Fzd1	AW227548|FZ-1|Fz1	frizzled homolog 1 (Drosophila)	protein-coding
common_peak1-16037-49-35-0.836358821582872-2.17301518846908	chr5	36711007	36712987	+	0	NA	intron (NM_030889, intron 1 of 26)	intron (NM_030889, intron 1 of 26)	28791	NM_030889	81840	Mm.34113	NM_030889	ENSMUSG00000029093	Sorcs2	N28137|mKIAA1329	sortilin-related VPS10 domain containing receptor 2	protein-coding
common_peak2-20754-70-94-0.0501113080444506-0.319126908303029	chr10	112928108	112929157	+	0	NA	Intergenic	Intergenic	-562550	NM_001033474	382423	Mm.431239	NM_001033474	ENSMUSG00000074748	Atxn7l3b	4921506J03Rik|6230409E21Rik|AI315132|ENSMUSG00000074747	ataxin 7-like 3B	protein-coding
common_peak2-22369-10-18--0.891512168434816-0.804350088532826	chr13	29503615	29504190	+	0	NA	intron (NM_144536, intron 13 of 15)	intron (NM_144536, intron 13 of 15)	395778	NR_045075	77920	Mm.197051	NR_045073	ENSMUSG00000086363	A330102I10Rik	-	RIKEN cDNA A330102I10 gene	ncRNA
unique_peak2-36325-11-15--0.491306415748387-0.435191258261915	chr2	84826997	84827648	+	0	NA	Intergenic	(GA)n|Simple_repeat|Simple_repeat	-1050	NM_016914	53856	Mm.19943	NM_016914	ENSMUSG00000027072	Prg3	MBP2|MBPH	proteoglycan 3	protein-coding
common_peak1-11253-80-80-0.510725763484728-1.67258053447009	chr15	80159419	80161294	+	0	NA	intron (NM_001044308, intron 4 of 36)	intron (NM_001044308, intron 4 of 36)	42688	NM_001044308	239556	Mm.291058	NM_001044308	ENSMUSG00000022416	Cacna1i	Ca(V)3.3	calcium channel, voltage-dependent, alpha 1I subunit	protein-coding
common_peak1-16424-42-58--0.140313721494658-0.332057628060234	chr5	130221849	130222998	+	0	NA	intron (NM_025450, intron 2 of 3)	B1F1|SINE|Alu	1020	NM_025450	66258	Mm.249809	NM_025450	ENSMUSG00000034211	Mrps17	1810006P02Rik|Mprs17	mitochondrial ribosomal protein S17	protein-coding
common_peak2-23498-6-14--1.34149248522822-1.01572999746118	chr15	76199391	76199983	+	0	NA	exon (NM_021555, exon 1 of 6)	exon (NM_021555, exon 1 of 6)	359	NM_021555	59053	Mm.133202	NM_021555	ENSMUSG00000022554	Hgh1	Brp16|D15Ertd741e|Fam203a	HGH1 homolog	protein-coding
common_peak1-10382-60-78-0.0505111134434282-0.322746982275293	chr13	94975940	94977132	+	0	NA	intron (NM_029153, intron 8 of 8)	intron (NM_029153, intron 8 of 8)	78700	NM_029153	107767	Mm.201455	NM_029153	ENSMUSG00000021687	Scamp1	4930505M11Rik|AI415563|AW122395	secretory carrier membrane protein 1	protein-coding
unique_peak2-33981-2-7--1.91745425626332-1.45399745587252	chr12	85330417	85330735	+	0	NA	intron (NM_134188, intron 1 of 2)	B2_Mm2|SINE|B2	1765	NM_134188	171210	Mm.371675	NM_134188	ENSMUSG00000021226	Acot2	AA571646|MTE-I|Mte1	acyl-CoA thioesterase 2	protein-coding
common_peak1-17180-124-150-0.371475580063602-1.57922877350103	chr6	122701255	122704226	+	0	NA	Intergenic	Intergenic	-9977	NM_011401	20527	Mm.395108	NM_011401	ENSMUSG00000003153	Slc2a3	AA408729|AL023014|AL024341|AU040424|C78366|Glut-3|Glut3	solute carrier family 2 (facilitated glucose transporter), member 3	protein-coding
unique_peak2-32600-5-8--0.874305337448166-1.10484139239135	chr1	91366472	91366887	+	0	NA	intron (NM_001037136, intron 1 of 16)	ID_B1|SINE|B4	15293	NM_001037136	347722	Mm.291135	NM_178119	ENSMUSG00000055013	Agap1	Centg2|Ggap1|R75364|mKIAA1099	ArfGAP with GTPase domain, ankyrin repeat and PH domain 1	protein-coding
unique_peak1-2507-8-5-0.420259917226415-1.10484139239135	chr16	14178108	14178758	+	0	NA	intron (NM_001114085, intron 4 of 8)	intron (NM_001114085, intron 4 of 8)	15065	NM_001114085	67203	Mm.24105	NM_023317	ENSMUSG00000022678	Nde1	2810027M15Rik|AU042936|AW822251|Nude|mNudE	nuclear distribution gene E homolog 1 (A nidulans)	protein-coding
common_peak1-14465-49-22-1.48272186696817-4.95156012887687	chr3	89685317	89686553	+	0	NA	intron (NM_010559, intron 6 of 9)	intron (NM_010559, intron 6 of 9)	31149	NM_010559	16194	Mm.2856	NM_010559	ENSMUSG00000027947	Il6ra	CD126|IL-6R|Il6r	interleukin 6 receptor, alpha	protein-coding
common_peak2-26745-21-15-0.569489265266236-0.756118839439552	chr2	132686473	132687246	+	0	NA	intron (NM_025646, intron 3 of 6)	intron (NM_025646, intron 3 of 6)	13389	NM_025646	66586	Mm.357342	NM_025646	ENSMUSG00000027357	Crls1	0610009I22Rik|4930557M15Rik|5730490M08Rik	cardiolipin synthase 1	protein-coding
common_peak1-15087-38-47--0.0135098414226258-0.303315798308572	chr3	127930239	127931403	+	0	NA	intron (NR_045704, intron 1 of 5)	intron (NR_045704, intron 1 of 5)	3702	NR_045704	402774	Mm.209170	NR_045704		D030025E07Rik	-	RIKEN cDNA D030025E07 gene	ncRNA
unique_peak1-6763-8-3-1.00522241794757-1.39487600375387	chr8	57778461	57778931	+	0	NA	Intergenic	Intergenic	607065	NM_175939	244486	Mm.67684	NM_175939	ENSMUSG00000046258	Adam29	-	a disintegrin and metallopeptidase domain 29	protein-coding
unique_peak1-3129-16-7-1.11826364226806-1.23399803405144	chr18	36342353	36343229	+	0	NA	intron (NM_001167891, intron 1 of 9)	ID4_|SINE|ID	14023	NM_001167891	100042150	Mm.380390	NM_001167891	ENSMUSG00000060275	Nrg2	Don1|NTAK	neuregulin 2	protein-coding
common_peak2-25106-52-65-0.0638658709072457-0.326961876409496	chr18	36725264	36727085	+	0	NA	intron (NM_175375, intron 1 of 33)	intron (NM_175375, intron 1 of 33)	5917	NM_175375	108857	Mm.482287	NM_175375	ENSMUSG00000024483	Ankhd1	1110004O12Rik|4933432B13Rik|9130019P20Rik|A530027J04Rik|A630021B20Rik|AA571404|Mask|mFLJ00246|mKIAA1085	ankyrin repeat and KH domain containing 1	protein-coding
unique_peak2-38559-7-14--1.10779976531033-0.817533494790411	chr7	64276375	64277143	+	0	NA	intron (NM_008074, intron 3 of 9)	L1Md_A|LINE|L1	365482	NM_008074	14407	Mm.434343	NM_008074		Gabrg3	B230362M20Rik|Gabrg-3	gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3	protein-coding
common_peak2-22040-9-9--0.132314688483142-1.03275496310833	chr12	69363910	69364305	+	0	NA	Intergenic	Intergenic	-593849	NR_033146	100316870	Mm.379794	NR_033146		Gm17821	-	DDB1 and CUL4 associated factor 5 pseudogene	pseudo
unique_peak1-3094-9-0-3.18961340640422-3.01029995663981	chr18	25081871	25082401	+	0	NA	intron (NM_001289654, intron 5 of 24)	RMER1A|Other|Other	215012	NM_001289655	225288	Mm.329322	NM_175276	ENSMUSG00000034295	Fhod3	A930009H06Rik|FHOS2|mKIAA1695	formin homology 2 domain containing 3	protein-coding
common_peak1-11564-82-77-0.607860925443486-2.27059340392728	chr16	11455353	11457415	+	0	NA	intron (NM_001290148, intron 6 of 13)	intron (NM_001290148, intron 6 of 13)	50643	NM_001290148	74478	Mm.325831	NM_028964	ENSMUSG00000071669	Snx29	4933437K13Rik|ENSMUSG00000079738|Gm11170|Gm1737|Gm930|Rundc2a	sorting nexin 29	protein-coding
unique_peak2-35320-5-11--1.28934283672701-1.477227296591	chr17	15563883	15564303	+	0	NA	intron (NR_033586, intron 9 of 10)	intron (NR_033586, intron 9 of 10)	30883	NM_024203	67544	Mm.35039	NM_024203	ENSMUSG00000014763	Fam120b	4932442K08Rik|AW049283|AW413338|CCPG|Pgcc1|mKIAA1838	family with sequence similarity 120, member B	protein-coding
unique_peak1-5068-29-12-1.41185036247402-2.85339697372352	chr4	139249062	139250496	+	0	NA	Intergenic	Intergenic	40326	NM_031873	83770	Mm.190612	NM_031873	ENSMUSG00000028738	Tas1r2	Gpr71|T1r2|TR2	taste receptor, type 1, member 2	protein-coding
common_peak2-28138-8-8--0.164702583494742-1.00793137938329	chr4	98004258	98004773	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	45441	NM_053157	94043	Mm.331719	NM_053157	ENSMUSG00000028563	Tm2d1	2310026L18Rik|AA990549|Bbp	TM2 domain containing 1	protein-coding
unique_peak1-4715-10-2-1.77145284428761-2.09384600808989	chr3	103859792	103860314	+	0	NA	intron (NM_001159354, intron 8 of 20)	intron (NM_001159354, intron 8 of 20)	-87814	NR_030676	100125931	Mm.400392	NR_030676	ENSMUSG00000089998	Phtf1os	A130049A11Rik	putative homeodomain transcription factor 1, opposite strand	ncRNA
unique_peak2-39830-9-10--0.269818212233077-1.05503135781948	chrX	48438794	48439470	+	0	NA	Intergenic	B3|SINE|B2	-67937	NM_172413	72065	Mm.43152	NM_172413	ENSMUSG00000050029	Rap2c	2010200P20Rik|AI194294|AL022976	RAP2C, member of RAS oncogene family	protein-coding
common_peak2-19898-30-52--0.558245045071326-0.936258361511353	chr1	106713949	106714923	+	0	NA	intron (NM_011800, intron 1 of 11)	intron (NM_011800, intron 1 of 11)	49040	NM_011800	23836	Mm.103640	NM_011800	ENSMUSG00000050840	Cdh20	Cdh7	cadherin 20	protein-coding
common_peak1-13675-18-7-1.31291915122835-1.71830443967823	chr2	28582658	28583479	+	0	NA	intron (NM_001033874, intron 5 of 12)	intron (NM_001033874, intron 5 of 12)	-5730	NR_037271	100526498		NR_037271		Mir3088	mmu-mir-3088	microRNA 3088	ncRNA
unique_peak2-38573-8-12--0.695217300193522-0.475924844171029	chr7	66449776	66450365	+	0	NA	Intergenic	Intergenic	-34050	NM_173010	22215	Mm.9002	NM_011668	ENSMUSG00000025326	Ube3a	4732496B02|5830462N02Rik|A130086L21Rik|Hpve6a|mKIAA4216	ubiquitin protein ligase E3A	protein-coding
unique_peak2-37303-4-9--1.34538860874061-1.36011389749466	chr4	123139200	123139641	+	0	NA	intron (NM_001199137, intron 35 of 92)	intron (NM_001199137, intron 35 of 92)	-50266	NM_001167918	442834	Mm.483803	NM_001167918		D830031N03Rik	Kiaa0754|mKIAA0754	RIKEN cDNA D830031N03 gene	protein-coding
common_peak1-16833-25-13-1.0544949832875-1.65862513589797	chr6	50595972	50596955	+	0	NA	Intergenic	Intergenic	7929	NM_021892	60531	Mm.157158	NM_021892		Npvf	Rfrp	neuropeptide VF precursor	protein-coding
common_peak1-17002-8-11--0.579740082773585-1.14218153353838	chr6	89344456	89344925	+	0	NA	intron (NM_001167736, intron 5 of 6)	intron (NM_001167736, intron 5 of 6)	-32083	NM_008881	18844	Mm.3789	NM_008881	ENSMUSG00000030084	Plxna1	2600013D04Rik|NOV|PlexA1|Plxn1|mKIAA4053	plexin A1	protein-coding
common_peak1-9495-40-23-1.07401318202994-2.65992162410571	chr11	109472703	109473970	+	0	NA	promoter-TSS (NM_145940)	promoter-TSS (NM_145940)	-633	NM_145940	52639	Mm.35817	NM_145940	ENSMUSG00000041895	Wipi1	4930533H01Rik|AW411817|D11Ertd498e	WD repeat domain, phosphoinositide interacting 1	protein-coding
unique_peak1-1715-11-6-0.701338662194009-1.32595962126035	chr13	95102569	95103193	+	0	NA	Intergenic	Intergenic	25997	NR_045619	328309	Mm.174191	NM_183205		Gm9776	A530089L17|ENSMUSG00000042857	predicted gene 9776	ncRNA
common_peak2-21561-13-7-0.778472030637769-0.817533494790411	chr11	97302785	97303194	+	0	NA	Intergenic	Intergenic	-8485	NM_021493	58996	Mm.394118	NM_021493	ENSMUSG00000049807	Arhgap23	A330041B18Rik	Rho GTPase activating protein 23	protein-coding
unique_peak2-39689-5-10--1.16381195464315-1.33892459842472	chr9	110476072	110476609	+	0	NA	exon (NM_001081340, exon 12 of 21)	exon (NM_001081340, exon 12 of 21)	41239	NM_001081340	235626	Mm.288949	NM_001081340	ENSMUSG00000044791	Setd2	4921524K10Rik|BC031601|KMT3A	SET domain containing 2	protein-coding
common_peak1-16752-24-11-1.20824740204656-1.9654245668484	chr6	34234265	34235448	+	0	NA	Intergenic	(TC)n|Simple_repeat|Simple_repeat	32587	NR_037965	626009	Mm.451	NR_028277		Gm6644	Akr1b3p|EG626009	Akr1b3 pseudogene	pseudo
unique_peak2-38481-2-6--1.72480917832092-1.26211192963361	chr7	30692077	30692469	+	0	NA	promoter-TSS (NM_001285797)	promoter-TSS (NM_001285797)	-722	NM_001285798	22689	Mm.86747	NM_011754	ENSMUSG00000062040	Zfp27	Zfp-27|mkr-4|mszf76	zinc finger protein 27	protein-coding
unique_peak1-4503-8-3-1.00522241794757-1.39487600375387	chr3	19456727	19457202	+	0	NA	intron (NM_025489, intron 2 of 4)	intron (NM_025489, intron 2 of 4)	25717	NM_001163537	66326	Mm.45615	NM_025489	ENSMUSG00000027606	Dnajc5b	1700008A05Rik	DnaJ (Hsp40) homolog, subfamily C, member 5 beta	protein-coding
common_peak2-28916-38-52--0.156467795264668-0.335782825099843	chr5	92504329	92505807	+	0	NA	intron (NM_011816, intron 1 of 11)	PB1D7|SINE|Alu	6875	NM_001080797	23881	Mm.290530	NM_011816	ENSMUSG00000029405	G3bp2	AA409541|E430034L04Rik|G3BP|mKIAA0660	GTPase activating protein (SH3 domain) binding protein 2	protein-coding
common_peak2-32359-18-19--0.00900894365901106-0.306598483909153	chrX	96025495	96026567	+	0	NA	intron (NM_052976, intron 2 of 24)	intron (NM_052976, intron 2 of 24)	60293	NM_052976	94190	Mm.254336	NM_052976		Ophn1	C130037N19Rik	oligophrenin 1	protein-coding
common_peak2-27481-54-98--0.456270858449876-1.16790778515003	chr3	93554166	93556525	+	0	NA	Intergenic	L1Md_F|LINE|L1	-44975	NM_207272	399675	Mm.377924	NM_207272	ENSMUSG00000060256	Tdpoz4	-	TD and POZ domain containing 4	protein-coding
common_peak1-11533-7-6--0.00826409175941478-0.97990265578305	chr16	4604374	4604884	+	0	NA	intron (NM_031184, intron 1 of 6)	intron (NM_031184, intron 1 of 6)	9916	NM_031184	83396	Mm.134072	NM_031184	ENSMUSG00000014303	Glis2	Gli5|Klf16|Nkl	GLIS family zinc finger 2	protein-coding
common_peak1-18967-8-17--1.16470258349474-1.02063122982878	chr9	54950774	54951240	+	0	NA	Intergenic	Intergenic	-46169	NM_180600	109161	Mm.207894	NM_180600	ENSMUSG00000032307	Ube2q2	3010021M21Rik	ubiquitin-conjugating enzyme E2Q (putative) 2	protein-coding
common_peak1-18961-15-26--0.742722751607812-0.823046386575433	chr9	53537198	53537770	+	0	NA	Intergenic	Intergenic	-23147	NM_175562	270160	Mm.290285	NM_175562	ENSMUSG00000055069	Rab39	C230094F14Rik|Rab39a	RAB39, member RAS oncogene family	protein-coding
common_peak2-26664-11-13--0.298661337805991-0.337263207250336	chr2	121506068	121506629	+	0	NA	intron (NM_172673, intron 1 of 14)	intron (NM_172673, intron 1 of 14)	126445	NM_172673	228564	Mm.121514	NM_172673	ENSMUSG00000027238	Frmd5	1500032A09Rik|5830442F04|A930004K21Rik|R75430	FERM domain containing 5	protein-coding
unique_peak2-39440-3-9--1.73591118484664-1.57096726280955	chr9	46273132	46273796	+	0	NA	Intergenic	Intergenic	-145395	NM_183104	74361	Mm.159169	NM_183104	ENSMUSG00000056617	4931429L15Rik	-	RIKEN cDNA 4931429L15 gene	protein-coding
common_peak2-25575-11-6-0.701338662194009-1.32595962126035	chr19	6980610	6981012	+	0	NA	TTS (NM_012021)	TTS (NM_012021)	3324	NM_012021	54683	Mm.279782	NM_012021		Prdx5	AOEB166|AOPP|Pmp20|Prdx6|PrxV	peroxiredoxin 5	protein-coding
unique_peak1-5723-9-2-1.60465090568306-1.87199725847353	chr6	42297944	42298456	+	0	NA	Intergenic	Intergenic	-1627	NM_011777	22793	Mm.282303	NM_011777	ENSMUSG00000029860	Zyx	9530098H06Rik|R75157	zyxin	protein-coding
unique_peak1-3881-11-1-2.50869358425161-2.83420869758413	chr2	13579904	13580230	+	0	NA	intron (NM_145838, intron 7 of 7)	L1Md_T|LINE|L1	84129	NM_011701	22352	Mm.268000	NM_011701	ENSMUSG00000026728	Vim	-	vimentin	protein-coding
common_peak1-13057-22-18-0.399356591643819-0.549581527953406	chr19	6057755	6058667	+	0	NA	promoter-TSS (NM_026246)	promoter-TSS (NM_026246)	244	NM_001190436	14109	Mm.329631	NM_007990	ENSMUSG00000038274	Fau	MNSFbeta	Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed (fox derived)	protein-coding
common_peak1-17160-11-7-0.508693584251613-1.21681515183528	chr6	119381454	119382137	+	0	NA	TTS (NM_001271757)	TTS (NM_001271757)	-14294	NM_197985	68465	Mm.291826	NM_197985	ENSMUSG00000030168	Adipor2	1110001I14Rik|ADCR2|AI115388|AW554121|D6Ucla1e|Paqr2	adiponectin receptor 2	protein-coding
common_peak2-23549-12-10-0.189344366450341-0.386243247519795	chr15	78934958	78935487	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	-4191	NM_177461	27008	Mm.196480	NM_177461	ENSMUSG00000033039	Micall1	260|AI448246|D15Mit260|D15N2e|EST573322|EST820961|MIRab13|mKIAA1668	microtubule associated monooxygenase, calponin and LIM domain containing -like 1	protein-coding
common_peak2-29677-14-23--0.685746340363512-0.669502273696327	chr6	72371951	72372817	+	0	NA	intron (NM_019802, intron 4 of 14)	intron (NM_019802, intron 4 of 14)	8082	NM_019802	56316	Mm.19937	NM_019802	ENSMUSG00000053460	Ggcx	-	gamma-glutamyl carboxylase	protein-coding
unique_peak2-39514-5-8--0.874305337448166-1.10484139239135	chr9	64021586	64021961	+	0	NA	intron (NM_024212, intron 1 of 9)	intron (NM_024212, intron 1 of 9)	579	NM_024212	67891	Mm.280083	NM_024212	ENSMUSG00000032399	Rpl4	2010004J23Rik	ribosomal protein L4	protein-coding
common_peak1-16217-12-14--0.25811461052088-0.309074325783021	chr5	98940724	98941280	+	0	NA	intron (NM_001024614, intron 3 of 5)	Lx5|LINE|L1	-36319	NR_030484	735265		NR_030484		Mir703	Mirn703|mmu-mir-703	microRNA 703	ncRNA
common_peak2-27111-18-30--0.641277159158523-0.738267116931589	chr3	10330824	10331557	+	0	NA	TTS (NM_001010834)	TTS (NM_001010834)	249	NM_018864	55980	Mm.183042	NM_018864	ENSMUSG00000027531	Impa1	2610002K09Rik|2900059K10Rik|AI325909	inositol (myo)-1(or 4)-monophosphatase 1	protein-coding
unique_peak2-38957-3-7--1.41398308995928-1.23214870625617	chr8	31828524	31828986	+	0	NA	Intergenic	Intergenic	149888	NR_045856	71314	Mm.158666	NR_045856	ENSMUSG00000097044	4933433F19Rik	-	RIKEN cDNA 4933433F19 gene	ncRNA
common_peak2-27765-86-153--0.291150746662548-0.86930367248664	chr3	130059736	130061210	+	0	NA	intron (NM_029838, intron 2 of 37)	intron (NM_029838, intron 2 of 37)	176710	NM_001244952	77018	Mm.91728	NM_029838	ENSMUSG00000058897	Col25a1	2700062B08Rik|CLAC-P	collagen, type XXV, alpha 1	protein-coding
common_peak2-20817-48-73--0.238526214394136-0.460841271984764	chr10	128058983	128059899	+	0	NA	Intergenic	Intergenic	4121	NM_013765	27370	Mm.261679	NM_013765	ENSMUSG00000025362	Rps26	-	ribosomal protein S26	protein-coding
unique_peak2-39075-2-5--1.50241675698448-1.08602067057793	chr8	72991023	72991270	+	0	NA	intron (NM_178771, intron 1 of 2)	intron (NM_178771, intron 1 of 2)	9696	NM_001122830	234378	Mm.187090	NM_172052	ENSMUSG00000055707	Klhl26	C630013N10Rik|Klkl26	kelch-like 26	protein-coding
common_peak1-14189-19-11-0.81772482594053-0.991115276827166	chr2	145785738	145786779	+	0	NA	intron (NM_175280, intron 6 of 6)	ORR1C2|LTR|MaLR	25738	NM_175280	78774	Mm.136347	NM_175280	ENSMUSG00000037143	Cfap61	4930529M08Rik|BB178539|BC024760	cilia and flagella associated protein 61	protein-coding
unique_peak1-4706-36-5-2.8943585854466-8.29344270363265	chr3	101525907	101527096	+	0	NA	Intergenic	L1M5|LINE|L1	113645	NM_172295	242125	Mm.32900	NM_172295	ENSMUSG00000044313	Mab21l3	-	mab-21-like 3 (C. elegans)	protein-coding
common_peak2-19952-15-6-1.20480982849805-1.32521814697968	chr1	132099179	132099641	+	0	NA	intron (NM_172485, intron 26 of 27)	L1Md_A|LINE|L1	220166	NM_007827	13137	Mm.436759	NM_007827	ENSMUSG00000026401	Daf2	AI323748|Cd55b|Daf|Daf-TM|TM-DAF	decay accelerating factor 2	protein-coding
common_peak2-23267-19-8-1.23276232521937-1.61268301619756	chr15	25767616	25768001	+	0	NA	Intergenic	Intergenic	-5245	NM_001034851	66270	Mm.25311	NM_025459	ENSMUSG00000022270	Fam134b	1810015C04Rik|AU015349	family with sequence similarity 134, member B	protein-coding
common_peak1-17516-16-11-0.533301141546906-0.58239619684445	chr7	27929001	27929793	+	0	NA	Intergenic	Lx2|LINE|L1	-9336	NM_001100184	384724	Mm.466612	NM_001100184	ENSMUSG00000078787	Cyp2t4	Gm1448|Gm1450	cytochrome P450, family 2, subfamily t, polypeptide 4	protein-coding
common_peak1-7690-71-85-0.218179424017873-0.565418124657885	chr1	82724258	82725563	+	0	NA	intron (NM_029409, intron 2 of 8)	intron (NM_029409, intron 2 of 8)	3417	NM_029409	75734	Mm.396863	NM_029409	ENSMUSG00000026150	Mff	5230400G24Rik|AI314724	mitochondrial fission factor	protein-coding
common_peak1-17262-203-281-0.327536804595093-2.127392332344	chr6	134791506	134793420	+	0	NA	intron (NM_177687, intron 1 of 4)	intron (NM_177687, intron 1 of 4)	12246	NM_177687	232430	Mm.267010	NM_177687		Crebl2	AI046348|B230205M03	cAMP responsive element binding protein-like 2	protein-coding
common_peak2-31569-15-20--0.380152672223105-0.397739447719386	chr8	118393241	118394197	+	0	NA	Intergenic	Intergenic	-162925	NM_001025577	17132	Mm.275549	NM_001025577		Maf	2810401A20Rik|A230108G15Rik|AW047063|c-maf	avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog	protein-coding
unique_peak1-4975-7-4-0.477162735410827-1.09384600808989	chr4	107923267	107923733	+	0	NA	intron (NM_001033634, intron 6 of 13)	intron (NM_001033634, intron 6 of 13)	-32973	NM_001167936	230590	Mm.301798	NM_001167936	ENSMUSG00000034645	Zyg11a	BC022150	zyg-11 family member A, cell cycle regulator	protein-coding
common_peak1-9351-19-10-0.943255708024389-1.16735254179725	chr11	97310865	97311692	+	0	NA	promoter-TSS (NM_021493)	promoter-TSS (NM_021493)	-196	NM_021493	58996	Mm.394118	NM_021493	ENSMUSG00000049807	Arhgap23	A330041B18Rik	Rho GTPase activating protein 23	protein-coding
unique_peak1-3254-10-6-0.549060422951165-1.21398586181642	chr18	65095455	65096055	+	0	NA	intron (NM_001114386, intron 1 of 30)	intron (NM_001114386, intron 1 of 30)	48345	NM_001114386	83814	Mm.98668	NM_031881	ENSMUSG00000024589	Nedd4l	1300012C07Rik|Nedd4-2|Nedd4b	neural precursor cell expressed, developmentally down-regulated gene 4-like	protein-coding
common_peak1-15258-15-10-0.552733131918359-0.604422558181019	chr4	21776172	21776809	+	0	NA	promoter-TSS (NR_028384)	promoter-TSS (NR_028384)	-895	NR_028384	67735	Mm.391650	NR_028384		4930528A17Rik	-	RIKEN cDNA 4930528A17 gene	ncRNA
common_peak1-13213-17-11-0.633333837483882-0.769930178837768	chr19	24163954	24164664	+	0	NA	Intergenic	Intergenic	-58800	NM_001114174	381217	Mm.426078	NM_001114174	ENSMUSG00000071604	Fam189a2	AI414343|AI666772|Gm967	family with sequence similarity 189, member A2	protein-coding
common_peak2-19764-23-40--0.635784500109003-0.950816664083192	chr1	79760800	79761902	+	0	NA	Intergenic	PB1D10|SINE|Alu	-3007	NM_027057	69368	Mm.293273	NM_027057	ENSMUSG00000073643	Wdfy1	1700013B03Rik|1700120F24Rik|FENS-1|Jr1|WDF1|ZFYVE17|mKIAA1435	WD repeat and FYVE domain containing 1	protein-coding
unique_peak2-34953-2-21--3.37688587490062-4.27364484827118	chr15	91049273	91050256	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-27526	NM_011994	26874	Mm.295456	NM_011994	ENSMUSG00000055782	Abcd2	ABC39|ALDL1|ALDR|ALDRP	ATP-binding cassette, sub-family D (ALD), member 2	protein-coding
unique_peak2-34336-6-6--0.241956811677302-0.947717972411649	chr13	98588800	98589147	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	259018	NR_046157	328314	Mm.138047	NR_046157		Gm5086	B230311A21|EG328314	predicted gene 5086	ncRNA
common_peak2-25280-15-15-0.0121647505556561-0.30803596071496	chr18	69196490	69197169	+	0	NA	Intergenic	L1Md_T|LINE|L1	-14902	NR_105780	102465187		NR_105780	miRBase:MI0021890	Mir145b	mmu-mir-145b	microRNA mir-145b	ncRNA
common_peak1-8470-10-10--0.103016273628528-0.301029995663987	chr10	80162558	80163185	+	0	NA	intron (NM_172457, intron 1 of 3)	B3A|SINE|B2	1694	NM_172457	208228	Mm.49309	NM_172457	ENSMUSG00000003348	Mob3a	5330417K06Rik|A630029F06|AV218468|Mobkl2a	MOB kinase activator 3A	protein-coding
unique_peak1-2842-11-5-0.923731083530457-1.477227296591	chr17	29031448	29031929	+	0	NA	Intergenic	MMERVK10C-int|LTR|ERVK	-10522	NR_045457	74179	Mm.248931	NR_045457	ENSMUSG00000085333	1700030A11Rik	-	RIKEN cDNA 1700030A11 gene	ncRNA
unique_peak2-34397-2-7--1.91745425626332-1.45399745587252	chr14	120291128	120291609	+	0	NA	Intergenic	Intergenic	142919	NR_045621	75432	Mm.443277	NR_045621		1700006F04Rik	-	RIKEN cDNA 1700006F04 gene	ncRNA
common_peak1-12921-65-52-0.764245484913928-2.53634419610405	chr19	3324855	3326755	+	0	NA	intron (NM_013495, intron 1 of 18)	intron (NM_013495, intron 1 of 18)	2504	NM_013495	12894	Mm.18522	NM_013495	ENSMUSG00000024900	Cpt1a	C730027G07|CPTI|Cpt1	carnitine palmitoyltransferase 1a, liver	protein-coding
common_peak1-14132-54-27-1.36573083957213-4.90987667658467	chr2	131095920	131097139	+	0	NA	intron (NM_153501, intron 1 of 6)	B2_Mm2|SINE|B2	8293	NM_153501	74450	Mm.101264	NM_153501	ENSMUSG00000037514	Pank2	4933409I19Rik|AI642621	pantothenate kinase 2	protein-coding
unique_peak2-36497-6-7--0.434601889619698-0.97990265578305	chr2	155027288	155027801	+	0	NA	intron (NM_001243712, intron 15 of 25)	intron (NM_001243712, intron 15 of 25)	-34725	NR_111891	67068	Mm.23693	NM_025947	ENSMUSG00000047459	Dynlrb1	2010012N15Rik|2010320M17Rik|9430076K19Rik|AV124457|DNLC2A|Dncl2a|km23-1	dynein light chain roadblock-type 1	protein-coding
unique_peak1-5052-7-2-1.21412832957703-1.45399745587252	chr4	135313451	135313883	+	0	NA	Intergenic	Intergenic	-1963	NM_001085509	242702	Mm.318639	NM_001085509	ENSMUSG00000037139	Myom3	8430427K15Rik|Gm434	myomesin family, member 3	protein-coding
common_peak2-30847-20-15-0.488074784591193-0.590343908676236	chr7	133782684	133783349	+	0	NA	Intergenic	MamRep605|Unknown|Unknown	-9807	NM_029339	75565	Mm.45686	NM_029339	ENSMUSG00000030714	Ccdc101	1700023O11Rik|9530025I05Rik	coiled-coil domain containing 101	protein-coding
common_peak2-31716-101-126-0.265329549964254-0.86930367248664	chr9	110688646	110690546	+	0	NA	Intergenic	Intergenic	-11093	NM_153099	235628	Mm.292285	NM_153099	ENSMUSG00000044664	Prss42	Tessp2	protease, serine 42	protein-coding
common_peak2-31474-14-17--0.270708841084668-0.328191099940267	chr8	106136050	106136953	+	0	NA	intron (NR_045730, intron 1 of 4)	BGLII_A|LTR|ERVK	8802	NR_045730	71058	Mm.67707	NR_045730		4933400L20Rik	-	RIKEN cDNA 4933400L20 gene	ncRNA
unique_peak1-2402-22-5-2.06232160436625-3.46164246247458	chr15	98624993	98626000	+	0	NA	Intergenic	Intergenic	5208	NM_021279	22408	Mm.1123	NM_021279	ENSMUSG00000022997	Wnt1	Int-1|Wnt-1|sw|swaying	wingless-type MMTV integration site family, member 1	protein-coding
common_peak2-26103-4-6--0.830815435910851-0.989110657569874	chr2	3716016	3716449	+	0	NA	Intergenic	RLTR13D1|LTR|ERVK	85502	NM_025626	66540	Mm.277864	NM_025626	ENSMUSG00000026655	Fam107b	3110001A13Rik|AA589595|AA959793|AI132312	family with sequence similarity 107, member B	protein-coding
unique_peak1-6882-54-16-2.08562292037939-8.6710539304256	chr8	91925959	91927820	+	0	NA	Intergenic	Intergenic	-358828	NM_021390	58198	Mm.214361	NM_021390	ENSMUSG00000031665	Sall1	Msal-3	sal-like 1 (Drosophila)	protein-coding
common_peak1-10214-43-34-0.653280168578736-1.38722011998117	chr13	49186679	49188270	+	0	NA	intron (NM_029361, intron 6 of 27)	intron (NM_029361, intron 6 of 27)	56223	NM_029361	75607	Mm.342723	NM_029361	ENSMUSG00000037989	Wnk2	1810073P09Rik|AW122246|ESTM15|X83337|mKIAA1760	WNK lysine deficient protein kinase 2	protein-coding
unique_peak2-39793-5-6--0.511735258063458-0.947717972411649	chrX	13347304	13347687	+	0	NA	intron (NM_001284503, intron 2 of 26)	MTA_Mm|LTR|MaLR	76187	NM_001284505	12361	Mm.327591	NM_009806	ENSMUSG00000031012	Cask	DXPri1|DXRib1|LIN-2|Pals3|mLin-2	calcium/calmodulin-dependent serine protein kinase (MAGUK family)	protein-coding
unique_peak1-6488-14-0-3.89921616035764-4.8164799306237	chr7	112620252	112620974	+	0	NA	Intergenic	Intergenic	10098	NM_028444	109042	Mm.3124	NM_028444	ENSMUSG00000037060	Prkcdbp	3110015B12Rik|6330514M23Rik|SRBC	protein kinase C, delta binding protein	protein-coding
common_peak1-11629-50-58-0.158297267117111-0.413183870294151	chr16	20672650	20673857	+	0	NA	intron (NM_001005331, intron 1 of 31)	CpG	431	NM_001005331	208643	Mm.260256	NM_145941	ENSMUSG00000045983	Eif4g1	E030015G23Rik|eIF4GI	eukaryotic translation initiation factor 4, gamma 1	protein-coding
unique_peak2-39632-4-13--1.83081543591085-2.04196296489515	chr9	99243313	99243968	+	0	NA	intron (NM_177775, intron 1 of 22)	intron (NM_177775, intron 1 of 22)	15309	NM_177775	272636	Mm.490440	NM_177775	ENSMUSG00000037681	Esyt3	D930024E11|D9Ertd280e|Fam62c|mKIAA4186	extended synaptotagmin-like protein 3	protein-coding
common_peak1-7590-90-117-0.17166197658031-0.523540816573272	chr1	55051902	55053763	+	0	NA	intron (NM_031179, intron 20 of 24)	intron (NM_031179, intron 20 of 24)	31490	NM_031179	81898	Mm.279736	NM_031179	ENSMUSG00000025982	Sf3b1	155kDa|2810001M05Rik|AA409119|Prp10|SAP155|SF3b155|TA-8|Targ4	splicing factor 3b, subunit 1	protein-coding
unique_peak1-2359-13-7-0.778472030637769-0.817533494790411	chr15	86189635	86190314	+	0	NA	intron (NM_145476, intron 9 of 12)	intron (NM_145476, intron 9 of 12)	145085	NM_145476	223754	Mm.28904	NM_145476	ENSMUSG00000051864	Tbc1d22a	BC023106|D15Ertd781e	TBC1 domain family, member 22a	protein-coding
common_peak2-21903-5-11--1.28934283672701-1.477227296591	chr12	8500139	8500731	+	0	NA	Intergenic	Intergenic	6356	NM_007483	11852	Mm.687	NM_007483	ENSMUSG00000054364	Rhob	AA017882|Arh6|Arhb	ras homolog gene family, member B	protein-coding
unique_peak2-32841-13-28--1.0795089644898-1.33403699391683	chr1	193398101	193399496	+	0	NA	promoter-TSS (NM_178632)	promoter-TSS (NM_178632)	615	NM_029766	76843	Mm.189102	NM_029766	ENSMUSG00000037474	Dtl	2810047L02Rik|5730564G15Rik|Ramp	denticleless homolog (Drosophila)	protein-coding
common_peak1-16523-20-46--1.06651406708644-2.18062287223157	chr5	140829717	140830468	+	0	NA	intron (NM_172277, intron 4 of 10)	intron (NM_172277, intron 4 of 10)	22216	NM_008637	17766	Mm.118846	NM_008637	ENSMUSG00000036639	Nudt1	Mth1	nudix (nucleoside diphosphate linked moiety X)-type motif 1	protein-coding
common_peak2-25144-73-120--0.226468230849373-0.582718239339643	chr18	44827917	44829260	+	0	NA	intron (NR_026853, intron 2 of 4)	intron (NR_026853, intron 2 of 4)	-6668	NM_001085374	328949	Mm.312511	NM_001033406	ENSMUSG00000071856	Mcc	D18Ertd451e|E330037C19	mutated in colorectal cancers	protein-coding
common_peak2-29688-25-25-0.161410187204014-0.36542888694933	chr6	72641553	72642518	+	0	NA	intron (NM_009332, intron 3 of 11)	intron (NM_009332, intron 3 of 11)	62210	NR_040421	100038714	Mm.321330	NR_040421		Gm15401	ENSMUSG00000072999|OTTMUSG00000021199	predicted gene 15401	ncRNA
unique_peak2-32643-2-9--2.23938235115068-1.87199725847353	chr1	131153229	131153641	+	0	NA	Intergenic	Intergenic	-16446	NM_172485	210417	Mm.380518	NM_172485	ENSMUSG00000042581	Thsd7b	1700074E13Rik|B930082A18|D130067I03Rik	thrombospondin, type I, domain containing 7B	protein-coding
unique_peak2-39445-6-11--1.01956439034085-1.32595962126035	chr9	48521235	48521849	+	0	NA	intron (NM_001033324, intron 4 of 6)	intron (NM_001033324, intron 4 of 6)	-108360	NM_010924	18113	Mm.8362	NM_010924	ENSMUSG00000032271	Nnmt	-	nicotinamide N-methyltransferase	protein-coding
common_peak1-13755-41-26-0.946261202685192-2.21947156384787	chr2	34030946	34032104	+	0	NA	intron (NM_001290576, intron 6 of 7)	intron (NM_001290576, intron 6 of 7)	196040	NM_001290576	18516	Mm.239941	NM_016768	ENSMUSG00000038718	Pbx3	-	pre B cell leukemia homeobox 3	protein-coding
unique_peak2-35318-5-5--0.289342836727009-0.909929411522249	chr17	15068427	15068834	+	0	NA	intron (NM_175173, intron 3 of 24)	intron (NM_175173, intron 3 of 24)	11499	NM_175173	71682	Mm.122698	NM_175173	ENSMUSG00000046991	Wdr27	0610012K18Rik	WD repeat domain 27	protein-coding
common_peak1-14577-22-57--1.21069689004017-3.08612073477863	chr3	38484154	38485062	+	0	NA	Intergenic	Intergenic	-100870	NM_001167883	99696	Mm.290937	NM_001033198	ENSMUSG00000044864	Ankrd50	AI662170|E430012K20Rik|mKIAA1223|mKIAA3019	ankyrin repeat domain 50	protein-coding
common_peak2-22787-13-31--1.22152796936223-1.73082168901047	chr14	7818026	7819350	+	0	NA	Intergenic	(GAA)n|Simple_repeat|Simple_repeat	41275	NM_001164727	100038847	Mm.443041	NM_001164727	ENSMUSG00000093985	Gm10406	ENSMUSG00000072735	predicted gene 10406	protein-coding
unique_peak1-1474-9-3-1.18961340640422-1.57096726280955	chr12	111891947	111892509	+	0	NA	intron (NM_030238, intron 51 of 76)	intron (NM_030238, intron 51 of 76)	28601	NM_025488	66323	Mm.273316	NM_025488	ENSMUSG00000056508	1700001K19Rik	-	RIKEN cDNA 1700001K19 gene	protein-coding
unique_peak2-35605-7-6--0.00826409175941478-0.97990265578305	chr17	80801519	80801936	+	0	NA	intron (NM_009231, intron 20 of 21)	intron (NM_009231, intron 20 of 21)	-28845	NR_028385	791338	Mm.204722	NR_028385		Gm10190	ENSMUSG00000066938	predicted gene 10190	ncRNA
unique_peak1-3419-20-4-2.16614668970383-3.28004177908661	chr19	5983188	5983983	+	0	NA	intron (NM_198650, intron 3 of 9)	intron (NM_198650, intron 3 of 9)	2558	NM_198650	381203	Mm.329638	NM_198650	ENSMUSG00000037451	Slc22a20	Gm963|OAT1-L|mOAT6	solute carrier family 22 (organic anion transporter), member 20	protein-coding
unique_peak2-37271-4-16--2.11092335510359-1.97518968347063	chr4	115226683	115227246	+	0	NA	Intergenic	Lx9|LINE|L1	-9290	NM_001252539	666168	Mm.482086	NM_201640	ENSMUSG00000028712	Cyp4a31	-	cytochrome P450, family 4, subfamily a, polypeptide 31	protein-coding
unique_peak2-35351-1-4--1.94898510510411-1.10720996964787	chr17	25268381	25268780	+	0	NA	Intergenic	Intergenic	-1759	NM_011930	26373	Mm.270587	NM_011930	ENSMUSG00000036636	Clcn7	AA409691|AW538136|ClC-7|D17Wsu51e	chloride channel 7	protein-coding
unique_peak1-5006-7-4-0.477162735410827-1.09384600808989	chr4	120169795	120170265	+	0	NA	intron (NM_013883, intron 9 of 16)	MTEa|LTR|MaLR	-34806	NM_177570	194219	Mm.29788	NM_177570	ENSMUSG00000047518	Slfnl1	4933406A14Rik	schlafen like 1	protein-coding
common_peak1-9837-15-34--1.11711826638931-1.74023246399357	chr12	76533061	76533893	+	0	NA	Intergenic	RLTR9E|LTR|ERVK	-15709	NM_175644	217674	Mm.252250	NM_175644	ENSMUSG00000048982	Gphb5	Zlut1	glycoprotein hormone beta 5	protein-coding
common_peak2-24447-20-26--0.266812717572275-0.373496418836697	chr17	22739386	22740313	+	0	NA	exon (NM_001104575, exon 3 of 6)	exon (NM_001104575, exon 3 of 6)	1734	NM_001104575	628185	Mm.390947	NM_001104575	ENSMUSG00000094921	Vmn2r112	EG628185|V2rp1	vomeronasal 2, receptor 112	protein-coding
unique_peak1-2663-8-4-0.683294323060208-1.21878474469819	chr16	55394952	55395468	+	0	NA	Intergenic	Intergenic	-111860	NM_178720	239852	Mm.245045	NM_178720	ENSMUSG00000064310	Zpld1	9430016A21Rik	zona pellucida like domain containing 1	protein-coding
unique_peak2-34957-7-6--0.00826409175941478-0.97990265578305	chr15	93656992	93657430	+	0	NA	Intergenic	Intergenic	100331	NR_045737	77248	Mm.410768	NR_045737		9430014N10Rik	-	RIKEN cDNA 9430014N10 gene	ncRNA
unique_peak1-6836-9-4-0.867685311516858-1.36011389749466	chr8	80857686	80858200	+	0	NA	intron (NM_183096, intron 12 of 13)	intron (NM_183096, intron 12 of 13)	102608	NM_138944	18997	Mm.234261	NM_138944	ENSMUSG00000031688	Pou4f2	Brn-3.2|Brn-3b|Brn3b|Pou4f-rs1|mBrn3-3R	POU domain, class 4, transcription factor 2	protein-coding
common_peak2-27255-24-33--0.294252938482622-0.390124689062463	chr3	54806911	54808002	+	0	NA	Intergenic	MLT1A0|LTR|MaLR	51521	NM_007628	12427	Mm.4815	NM_007628	ENSMUSG00000027793	Ccna1	-	cyclin A1	protein-coding
common_peak1-12180-41-81--0.656403299769424-1.68521156853127	chr17	31564759	31565959	+	0	NA	intron (NM_008804, intron 4 of 18)	RLTR11A|LTR|ERVK	42180	NM_001163748	18585	Mm.10812	NM_008804	ENSMUSG00000041119	Pde9a	PDE9A1	phosphodiesterase 9A	protein-coding
common_peak2-25130-15-42--1.41410000414644-2.92433603673115	chr18	39490047	39490650	+	0	NA	intron (NM_175164, intron 20 of 22)	intron (NM_175164, intron 20 of 22)	156551	NM_008173	14815	Mm.129481	NM_008173	ENSMUSG00000024431	Nr3c1	GR|Grl-1|Grl1	nuclear receptor subfamily 3, group C, member 1	protein-coding
common_peak2-25818-6-7--0.434601889619698-0.97990265578305	chr19	38040133	38040510	+	0	NA	intron (NM_001099634, intron 18 of 52)	intron (NM_001099634, intron 18 of 52)	77746	NM_001099634	226101	Mm.34674	NM_177035	ENSMUSG00000048612	Myof	2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3	myoferlin	protein-coding
common_peak1-8311-15-14-0.105274154947137-0.330004445983672	chr10	40882688	40883403	+	0	NA	Intergenic	Intergenic	-91655	NM_199058	140741	Mm.290693	NM_199058	ENSMUSG00000046922	Gpr6	AI852874|Gm233	G protein-coupled receptor 6	protein-coding
common_peak2-25199-27-11-1.40658345017408-2.62629506227042	chr18	60612261	60612912	+	0	NA	Intergenic	B4A|SINE|B4	49051	NM_134133	106878	Mm.273197	NM_134133	ENSMUSG00000038059	Smim3	2010002N04Rik|AI195350|AW561905|Nid67|cI-41	small integral membrane protein 3	protein-coding
unique_peak1-5266-19-5-1.81772482594053-2.59995804677862	chr5	64505981	64506774	+	0	NA	intron (NM_025700, intron 12 of 13)	intron (NM_025700, intron 12 of 13)	22188	NM_025700	66681	Mm.2325	NM_025700	ENSMUSG00000029171	Pgm1	3230402E02Rik|Pgm-1|Pgm2	phosphoglucomutase 1	protein-coding
unique_peak1-6019-11-4-1.18676548936425-1.68134727924692	chr6	112324871	112325425	+	0	NA	intron (NM_175525, intron 10 of 11)	intron (NM_175525, intron 10 of 11)	12869	NM_175525	243612	Mm.122653	NM_175525	ENSMUSG00000034387	Ssu2	D630042P16Rik|Fls485|Ssuh2	ssu-2 homolog (C. elegans)	protein-coding
unique_peak1-5837-7-2-1.21412832957703-1.45399745587252	chr6	72623678	72624267	+	0	NA	intron (NM_009332, intron 3 of 11)	intron (NM_009332, intron 3 of 11)	44147	NR_040421	100038714	Mm.321330	NR_040421		Gm15401	ENSMUSG00000072999|OTTMUSG00000021199	predicted gene 15401	ncRNA
common_peak2-20197-14-32--1.14517795900081-1.66700866096458	chr1	175692008	175692891	+	0	NA	intron (NM_008329, intron 1 of 8)	ORR1E|LTR|MaLR	4601	NM_008329	15951	Mm.261270	NM_008329	ENSMUSG00000073489	Ifi204	Ifi16|p204	interferon activated gene 204	protein-coding
common_peak2-28758-24-23-0.208247402046561-0.407645899519042	chr5	43672248	43672936	+	0	NA	intron (NM_175937, intron 8 of 10)	intron (NM_175937, intron 8 of 10)	-45999	NR_028417	665934	Mm.381491	NR_028417		Gm7854	EG665934|ENSMUSG00000054483	predicted gene 7854	ncRNA
common_peak1-9475-33-32-0.286943443167075-0.49444889977478	chr11	106159459	106161002	+	0	NA	Intergenic	Intergenic	2980	NM_008117	14599	Mm.343934	NM_008117	ENSMUSG00000020713	Gh	Gh1	growth hormone	protein-coding
common_peak2-29662-11-15--0.491306415748387-0.435191258261915	chr6	71966012	71966574	+	0	NA	intron (NR_046180, intron 2 of 2)	RSINE1|SINE|B4	26229	NR_046180	330350	Mm.246787	NR_046180		9130221F21Rik	9130221F21	RIKEN cDNA 9130221F21 gene	ncRNA
common_peak2-23039-6-7--0.434601889619698-0.97990265578305	chr14	68775852	68776294	+	0	NA	Intergenic	Intergenic	-33012	NM_008691	18040	Mm.242832	NM_008691	ENSMUSG00000022054	Nefm	NF-M|NF160|NF165|Nef3|Nfm	neurofilament, medium polypeptide	protein-coding
common_peak2-29583-67-76-0.277624942088094-0.672993412022086	chr6	49073294	49074536	+	0	NA	intron (NM_023670, intron 5 of 14)	L1VL2|LINE|L1	50121	NM_029353	75593	Mm.439947	NM_029353	ENSMUSG00000029815	Malsu1	2410003K15Rik|Matsu1	mitochondrial assembly of ribosomal large subunit 1	protein-coding
common_peak2-20654-10-21--1.10301627362853-1.16735254179725	chr10	82178085	82178832	+	0	NA	intron (NM_001081218, intron 7 of 14)	Lx|LINE|L1	16706	NM_001081218	67933	Mm.127405	NM_026462		Hcfc2	1700129L13Rik|AU019838	host cell factor C2	protein-coding
common_peak2-29213-10-10--0.103016273628528-0.301029995663987	chr5	137293981	137294513	+	0	NA	intron (NM_024474, intron 3 of 12)	intron (NM_024474, intron 3 of 12)	64730	NM_024474	140709	Mm.295020	NM_024474	ENSMUSG00000004415	Col26a1	9430032K24Rik|BC002218|Col26a|Emid2|Emu2	collagen, type XXVI, alpha 1	protein-coding
common_peak1-18422-21-18-0.32156175182265-0.48779450977742	chr8	77132585	77133335	+	0	NA	Intergenic	Intergenic	-264113	NM_027837	71597	Mm.158735	NM_027837	ENSMUSG00000031621	Isx	9130012O13Rik|Pix-1	intestine specific homeobox	protein-coding
common_peak2-25134-14-17--0.270708841084668-0.328191099940267	chr18	42052242	42052889	+	0	NA	intron (NM_029942, intron 5 of 6)	intron (NM_029942, intron 5 of 6)	58283	NM_029942	77619	Mm.30649	NM_029942	ENSMUSG00000056671	Prelid2	1700003A01Rik|C330008K14Rik	PRELI domain containing 2	protein-coding
common_peak1-12344-26-40--0.429652912459622-0.612304185853036	chr17	56109079	56110068	+	0	NA	promoter-TSS (NM_009168)	promoter-TSS (NM_009168)	-332	NM_001159523	20420	Mm.20908	NM_009168	ENSMUSG00000039154	Shd	AI413439	src homology 2 domain-containing transforming protein D	protein-coding
common_peak1-10279-17-13-0.410941416147434-0.546772548767014	chr13	59669125	59669901	+	0	NA	Intergenic	Intergenic	-10805	NM_023328	67269	Mm.153008	NM_023328	ENSMUSG00000021557	Agtpbp1	1700020N17Rik|2310001G17Rik|2900054O13Rik|4930445M19Rik|5730402G09Rik|CCP1|Nna1|nmf243|pcd	ATP/GTP binding protein 1	protein-coding
common_peak1-9518-50-27-1.23358539442135-3.96462675495423	chr11	115563792	115564874	+	0	NA	intron (NM_008163, intron 1 of 5)	(TC)n|Simple_repeat|Simple_repeat	5578	NM_008163	14784	Mm.439649	NM_008163	ENSMUSG00000059923	Grb2	AA408164|Ash	growth factor receptor bound protein 2	protein-coding
common_peak2-29495-21-13-0.762134343208631-1.0220094258199	chr6	31317755	31318236	+	0	NA	intron (NR_040300, intron 2 of 2)	intron (NR_040300, intron 2 of 2)	30778	NR_040300	100503869	Mm.370532	NR_040300	ENSMUSG00000086212	Mkln1os	Gm13845|OTTMUSG00000014733	muskelin 1, intracellular mediator containing kelch motifs, opposite strand	ncRNA
common_peak1-15440-24-18-0.545282389324131-0.776879508296351	chr4	94556187	94556990	+	0	NA	Intergenic	L1_Mur3|LINE|L1	38946	NM_027089	67753	Mm.25097	NM_027089	ENSMUSG00000028575	Eqtn	1700028B15Rik|4930579C15Rik|Afaf|C81058|Eqtl|Eqts	equatorin, sperm acrosome associated	protein-coding
common_peak2-30306-8-9--0.316705676939792-1.03275496310833	chr7	19871249	19871656	+	0	NA	intron (NM_013648, intron 1 of 9)	B1_Mur4|SINE|Alu	3479	NM_013648	20167	Mm.24142	NM_013648	ENSMUSG00000030401	Rtn2	MMS10-P|Ms10p|NSPLI|Nspl1	reticulon 2 (Z-band associated protein)	protein-coding
common_peak2-23689-35-44--0.0604828378671707-0.303525995925004	chr15	86185021	86186262	+	0	NA	intron (NM_145476, intron 9 of 12)	intron (NM_145476, intron 9 of 12)	140752	NM_145476	223754	Mm.28904	NM_145476	ENSMUSG00000051864	Tbc1d22a	BC023106|D15Ertd781e	TBC1 domain family, member 22a	protein-coding
common_peak1-10610-10-5-0.771452844287613-1.33892459842472	chr14	32160433	32161000	+	0	NA	intron (NM_009796, intron 4 of 20)	ID_B1|SINE|B4	10806	NM_009796	12339	Mm.201535	NM_009796	ENSMUSG00000021893	Capn7	AU022319|PalBH	calpain 7	protein-coding
common_peak2-20959-38-13-1.76409773724093-4.93958276952711	chr11	19019625	19020460	+	0	NA	Intergenic	Intergenic	54764	NR_046037	74059	Mm.292321	NR_046037	ENSMUSG00000086025	4933406G16Rik	-	RIKEN cDNA 4933406G16 gene	ncRNA
unique_peak1-5500-8-1-2.00522241794757-2.05605744720049	chr5	135919675	135920015	+	0	NA	intron (NM_146001, intron 9 of 30)	intron (NM_146001, intron 9 of 30)	-49429	NM_148932	107939	Mm.28399	NM_148932	ENSMUSG00000053293	Pom121	2610027A18Rik|C80273|mKIAA0618	nuclear pore membrane protein 121	protein-coding
common_peak1-14280-38-48--0.0432571848166781-0.301029995664001	chr2	157006150	157007720	+	0	NA	intron (NM_001139516, intron 11 of 12)	L1Md_F2|LINE|L1	23335	NM_011249	19650	Mm.244671	NM_011249	ENSMUSG00000027641	Rbl1	AW547426|PRB1|p107	retinoblastoma-like 1 (p107)	protein-coding
common_peak2-27467-14-11-0.314253659636488-0.435191258261915	chr3	90600618	90601145	+	0	NA	Intergenic	L1Md_F3|LINE|L1	70053	NM_207263	384997	Mm.316644	NM_207263	ENSMUSG00000042250	Pglyrp4	Gm1478|Gm413	peptidoglycan recognition protein 4	protein-coding
common_peak1-11552-40-56--0.173914331413643-0.351783812734557	chr16	10785201	10786613	+	0	NA	promoter-TSS (NM_001271603)	promoter-TSS (NM_001271603)	-278	NM_001271603	12703	Mm.130	NM_009896	ENSMUSG00000038037	Socs1	Cish1|Cish7|JAB|SOCS-1|SSI-1	suppressor of cytokine signaling 1	protein-coding
unique_peak1-2428-7-6--0.00826409175941478-0.97990265578305	chr15	101224932	101225489	+	0	NA	Intergenic	Intergenic	-17624	NM_033073	110310	Mm.486285	NM_033073		Krt7	D15Wsu77e|K7|Krt2-7	keratin 7	protein-coding
unique_peak2-33023-5-12--1.40482005414695-1.62698961692433	chr10	68246880	68247493	+	0	NA	Intergenic	Intergenic	60692	NM_177794	327766	Mm.2479	NM_177794	ENSMUSG00000060044	Tmem26	3230401A06|AI195372	transmembrane protein 26	protein-coding
unique_peak1-372-10-3-1.35641534500877-1.75805390616669	chr1	144493158	144493708	+	0	NA	Intergenic	Lx|LINE|L1	-994394	NM_020025	26878	Mm.285580	NM_020025	ENSMUSG00000033849	B3galt2	-	UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2	protein-coding
common_peak1-12923-373-326-1.17473701251043-35.8655858812856	chr19	3766923	3769165	+	0	NA	5' UTR (NM_001167886, exon 2 of 11)	5' UTR (NM_001167886, exon 2 of 11)	623	NM_001167885	225888	Mm.278578	NM_144871	ENSMUSG00000045098	Suv420h1	AA117471|C630029K18Rik|KMT5B|Suv4-20h1	suppressor of variegation 4-20 homolog 1 (Drosophila)	protein-coding
common_peak1-19263-45-17-1.69043302390256-5.44514020616609	chr9	111648020	111649114	+	0	NA	Intergenic	Intergenic	-55847	NM_016853	20840	Mm.1414	NM_016853	ENSMUSG00000032502	Stac	-	src homology three (SH3) and cysteine rich domain	protein-coding
common_peak2-25886-22-14-0.740393509478886-0.983972868822056	chr19	44377892	44378528	+	0	NA	TTS (NR_039574)	TTS (NR_039574)	549	NR_039574	100628619		NR_039574		Mir5114	mmu-mir-5114|mu-mir-5114	microRNA 5114	ncRNA
unique_peak2-36292-6-13--1.2419568116773-1.58711810488664	chr2	71389275	71389744	+	0	NA	Intergenic	Intergenic	-4698	NM_010054	13392	Mm.3896	NM_010054	ENSMUSG00000023391	Dlx2	AW121999|Dlx-2|Tes-1	distal-less homeobox 2	protein-coding
common_peak2-27590-20-44--1.00377831173848-1.92432670720421	chr3	102203778	102204754	+	0	NA	Intergenic	L1MC|LINE|L1	-69576	NM_001112698	18049	Mm.1259	NM_013609	ENSMUSG00000027859	Ngf	Ngfb	nerve growth factor	protein-coding
common_peak2-28798-93-166--0.272634428967783-0.861835798472886	chr5	64802492	64804691	+	0	NA	Intergenic	URR1B|DNA|MER1_type	55590	NR_040681	69999	Mm.261413	NR_040681		1700027F09Rik	-	RIKEN cDNA 1700027F09 gene	ncRNA
unique_peak2-39598-5-6--0.511735258063458-0.947717972411649	chr9	77754529	77754919	+	0	NA	Intergenic	Lx8|LINE|L1	-10448	NM_134255	68801	Mm.430736	NM_134255	ENSMUSG00000032349	Elovl5	1110059L23Rik|AI747313|AU043003|HELO1	ELOVL family member 5, elongation of long chain fatty acids (yeast)	protein-coding
unique_peak2-37521-8-19--1.31670567693979-1.30305656033811	chr5	21499812	21500362	+	0	NA	intron (NM_011261, intron 28 of 63)	L1Md_F3|LINE|L1	-128665	NM_030727	80979	Mm.160370	NM_030727	ENSMUSG00000029015	Slc26a5	Pres|prestin	solute carrier family 26, member 5	protein-coding
common_peak1-7580-22-9-1.32535601020004-2.00244947055753	chr1	52726499	52727258	+	0	NA	intron (NM_133829, intron 3 of 6)	intron (NM_133829, intron 3 of 6)	39329	NM_001142647	227094	Mm.83541	NM_172654	ENSMUSG00000043015	Tmem194b	5330401P04Rik|9830163O08	transmembrane protein 194B	protein-coding
common_peak1-15429-21-20-0.177171842487475-0.380101753845079	chr4	89040185	89041120	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-83711	NM_007670	12579	Mm.423094	NM_007670	ENSMUSG00000073802	Cdkn2b	AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b	cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)	protein-coding
unique_peak1-1792-15-4-1.69023665566829-1.97518968347063	chr14	21826698	21827496	+	0	NA	intron (NM_009502, intron 11 of 20)	B1_Mur2|SINE|Alu	44567	NM_018829	55946	Mm.376269	NM_018829		Ap3m1	1200013D09Rik|C78982|R75378	adaptor-related protein complex 3, mu 1 subunit	protein-coding
unique_peak1-3571-13-1-2.77847203063777-3.64038867156802	chr19	28777019	28777652	+	0	NA	intron (NR_045330, intron 4 of 4)	Lx7|LINE|L1	-22768	NM_175459	226075	Mm.223508	NM_175459		Glis3	4833409N03Rik|E230012L24|E330013K21Rik	GLIS family zinc finger 3	protein-coding
unique_peak1-4443-10-2-1.77145284428761-2.09384600808989	chr2	170344976	170345483	+	0	NA	TTS (NM_001110152)	TTS (NM_001110152)	-7802	NR_040367	100502946	Mm.421284	NR_040367	ENSMUSG00000085495	Gm16796	-	predicted gene, 16796	ncRNA
unique_peak2-38748-2-7--1.91745425626332-1.45399745587252	chr7	116230386	116230856	+	0	NA	Intergenic	Intergenic	-3783	NM_178780	320360	Mm.71007	NM_178780	ENSMUSG00000048330	Ric3	E130307J04Rik	resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	protein-coding
unique_peak1-6428-9-6-0.382258484346616-1.11707584880836	chr7	93752544	93753089	+	0	NA	Intergenic	Lx2|LINE|L1	12337	NM_001011750	257904	Mm.377293	NM_001011750	ENSMUSG00000062042	Olfr294	MOR219-5	olfactory receptor 294	protein-coding
common_peak1-7756-15-10-0.552733131918359-0.604422558181019	chr1	91095592	91096413	+	0	NA	Intergenic	IAPLTR1_Mm|LTR|ERVK	-5875	NR_106129	102465771		NR_106129		Mir7669	mmu-mir-7669	microRNA mir-7669	ncRNA
common_peak2-26087-20-19-0.16614668970383-0.348739088570342	chr2	153632197	153632825	+	0	NA	Intergenic	BC1_Mm|scRNA|scRNA	25896	NR_036629	100504221	Mm.246778	NM_177849	ENSMUSG00000044083	Efcab8	A630008I04|EG329541	EF-hand calcium binding domain 8	ncRNA
common_peak2-25514-15-15-0.0121647505556561-0.30803596071496	chr19	5689775	5690336	+	0	NA	5' UTR (NM_022012, exon 3 of 12)	5' UTR (NM_022012, exon 3 of 12)	924	NM_022012	26403	Mm.185026	NM_022012	ENSMUSG00000004054	Map3k11	2610017K16Rik|Mlk3|PTK1|SPRK	mitogen-activated protein kinase kinase kinase 11	protein-coding
unique_peak1-7297-10-4-1.03448725012141-1.5150158574804	chr9	110305232	110305730	+	0	NA	intron (NM_001081043, intron 1 of 24)	intron (NM_001081043, intron 1 of 24)	5233	NM_001081043	104831	Mm.335477	NM_001081043	ENSMUSG00000036057	Ptpn23	AI462446|PTP-TD14	protein tyrosine phosphatase, non-receptor type 23	protein-coding
unique_peak1-4029-12-0-3.64877598508764-4.21441993929574	chr2	50456981	50457481	+	0	NA	Intergenic	L1Md_T|LINE|L1	304901	NR_040362	100502624	Mm.382825	NR_040361		Gm13483	OTTMUSG00000012382	predicted gene 13483	ncRNA
common_peak2-25225-9-8-0.0196884049619079-1.03275496310833	chr18	62001820	62002261	+	0	NA	intron (NM_001164491, intron 7 of 23)	MLT1K|LTR|MaLR	-55724	NM_178928	106877	Mm.26632	NM_178928	ENSMUSG00000033032	Afap1l1	AI173486	actin filament associated protein 1-like 1	protein-coding
unique_peak1-1491-28-7-2.05295911982146-4.28647646517482	chr13	9043346	9044366	+	0	NA	Intergenic	RSINE1|SINE|B4	-48598	NM_027000	69237	Mm.41800	NM_027000	ENSMUSG00000021149	Gtpbp4	2610028C09Rik|Crfg|Gtpbp3|NGB|Nog1	GTP binding protein 4	protein-coding
unique_peak2-39190-8-8--0.164702583494742-1.00793137938329	chr8	95887958	95888307	+	0	NA	Intergenic	Intergenic	-27024	NM_021456	12623	Mm.22720	NM_021456	ENSMUSG00000057074	Ces1g	Ces-1|Ces1|Ses-1	carboxylesterase 1G	protein-coding
unique_peak2-35655-8-19--1.31670567693979-1.30305656033811	chr18	4353740	4354517	+	0	NA	non-coding (NR_040328, exon 2 of 4)	non-coding (NR_040328, exon 2 of 4)	583	NR_040328	73915	Mm.482777	NR_040328		4833419F23Rik	-	RIKEN cDNA 4833419F23 gene	ncRNA
common_peak1-14828-27-29-0.0846553552867171-0.333081040816753	chr3	90604272	90605468	+	0	NA	Intergenic	L1Md_F3|LINE|L1	74042	NM_207263	384997	Mm.316644	NM_207263	ENSMUSG00000042250	Pglyrp4	Gm1478|Gm413	peptidoglycan recognition protein 4	protein-coding
common_peak1-18894-9-13--0.617741515653384-0.459837087125828	chr9	36767078	36767615	+	0	NA	intron (NM_148950, intron 3 of 11)	(TTCC)n|Simple_repeat|Simple_repeat	116102	NM_183171	235180	Mm.5264	NM_183171	ENSMUSG00000032118	Fez1	UNC-76|UNC76	fasciculation and elongation protein zeta 1 (zygin I)	protein-coding
common_peak1-9565-15-15-0.0121647505556561-0.30803596071496	chr11	117932727	117933421	+	0	NA	intron (NM_001167746, intron 48 of 80)	intron (NM_001167746, intron 48 of 80)	57459	NM_001167746	69926	Mm.473893	NM_001167746	ENSMUSG00000033987	Dnah17	2810003K23Rik|Dnahc17|Dnahcl1|Gm1178|mKIAA3028	dynein, axonemal, heavy chain 17	protein-coding
unique_peak2-33456-2-6--1.72480917832092-1.26211192963361	chr11	65792164	65792534	+	0	NA	intron (NM_001099633, intron 42 of 68)	intron (NM_001099633, intron 42 of 68)	171603	NM_026107	52712	Mm.340052	NM_026107	ENSMUSG00000018347	Zkscan6	1700128E15Rik|D11Ertd714e|KOX11|Zfp535|Znf18	zinc finger with KRAB and SCAN domains 6	protein-coding
unique_peak1-6813-10-4-1.03448725012141-1.5150158574804	chr8	73100917	73101399	+	0	NA	intron (NM_007924, intron 2 of 11)	intron (NM_007924, intron 2 of 11)	-17222	NM_023627	71780	Mm.29357	NM_023627	ENSMUSG00000019139	Isyna1	1300017C10Rik|AU018670	myo-inositol 1-phosphate synthase A1	protein-coding
unique_peak2-33763-5-12--1.40482005414695-1.62698961692433	chr11	117826510	117827092	+	0	NA	TTS (NM_007707)	TTS (NM_007707)	3879	NM_007707	12702	Mm.3468	NM_007707	ENSMUSG00000053113	Socs3	Cis3|Cish3|EF-10|Ef10|SSI-3|Ssi3	suppressor of cytokine signaling 3	protein-coding
common_peak1-12764-61-22-1.85918737369233-8.50108378334121	chr18	60722514	60724297	+	0	NA	intron (NM_025776, intron 2 of 10)	intron (NM_025776, intron 2 of 10)	2965	NM_025776	66810	Mm.275106	NM_025776	ENSMUSG00000024604	Rbm22	8430430L24Rik	RNA binding motif protein 22	protein-coding
unique_peak2-36352-5-5--0.289342836727009-0.909929411522249	chr2	96185067	96185476	+	0	NA	intron (NM_001289742, intron 1 of 7)	intron (NM_001289742, intron 1 of 7)	26945	NM_001289743	241568	Mm.241682	NM_178725	ENSMUSG00000050587	Lrrc4c	6430556C10Rik|NGL-1	leucine rich repeat containing 4C	protein-coding
common_peak2-29663-8-14--0.901668177660948-0.660903317613906	chr6	71989627	71990180	+	0	NA	intron (NR_046180, intron 1 of 2)	MTD|LTR|MaLR	2619	NR_046180	330350	Mm.246787	NR_046180		9130221F21Rik	9130221F21	RIKEN cDNA 9130221F21 gene	ncRNA
unique_peak2-34223-3-8--1.58390809140159-1.39487600375387	chr13	49421495	49422086	+	0	NA	Intergenic	Intergenic	-15128	NM_001039179	76895	Mm.197387	NM_029791	ENSMUSG00000037933	Bicd2	-	bicaudal D homolog 2 (Drosophila)	protein-coding
common_peak1-10325-33-38-0.0459353436632801-0.312166972154323	chr13	73603191	73604473	+	0	NA	promoter-TSS (NM_145376)	promoter-TSS (NM_145376)	-999	NM_145376	210992	Mm.284649	NM_145376	ENSMUSG00000021608	Lpcat1	2900035H07Rik|Aytl2|BB137372|BC005662|C87117|LPCAT|rd11	lysophosphatidylcholine acyltransferase 1	protein-coding
common_peak2-29680-43-48-0.167853341408494-0.404412720632912	chr6	72389363	72390780	+	0	NA	promoter-TSS (NM_145569)	promoter-TSS (NM_145569)	-519	NM_145569	232087	Mm.29815	NM_145569	ENSMUSG00000053907	Mat2a	D630045P18Rik	methionine adenosyltransferase II, alpha	protein-coding
common_peak1-8304-49-91--0.517278133031829-1.32755114337411	chr10	39612909	39614150	+	0	NA	intron (NR_033628, intron 3 of 3)	intron (NR_033628, intron 3 of 3)	5515	NR_033628	213332	Mm.484359	NR_033628		AA474331	-	expressed sequence AA474331	pseudo
common_peak1-7907-7-24--1.84476535947653-2.44150343356329	chr1	135861554	135862057	+	0	NA	Intergenic	Intergenic	-43827	NM_054077	116847	Mm.214514	NM_054077	ENSMUSG00000041577	Prelp	7330409J17Rik|SLRR2A	proline arginine-rich end leucine-rich repeat	protein-coding
common_peak2-24713-91-189--0.49642366272861-2.2645050194206	chr17	46554855	46556371	+	0	NA	3' UTR (NM_207671, exon 10 of 10)	3' UTR (NM_207671, exon 10 of 10)	-10278	NM_053250	114570	Mm.25168	NM_053250	ENSMUSG00000023968	Crip3	TLP|TLP-A|TLP-B|Tlmp	cysteine-rich protein 3	protein-coding
unique_peak2-37578-1-8--2.79698201165906-2.05605744720049	chr5	36135589	36136049	+	0	NA	intron (NM_001177700, intron 1 of 16)	intron (NM_001177700, intron 1 of 16)	35290	NM_177678	231148	Mm.254446	NM_177678	ENSMUSG00000029095	Ablim2	AI606905|C230091L11	actin-binding LIM protein 2	protein-coding
common_peak2-30661-43-82--0.592476245823222-1.46410551884986	chr7	100930442	100932188	+	0	NA	Intergenic	Intergenic	702926	NM_021427	58238	Mm.113787	NM_021427		Fam181b	A830059I20Rik|AB041569	family with sequence similarity 181, member B	protein-coding
common_peak2-29236-5-7--0.704380336005853-1.01466476204226	chr5	139099262	139099643	+	0	NA	Intergenic	Intergenic	35365	NM_183025	243308	Mm.36612	NM_183025	ENSMUSG00000056014	A430033K04Rik	C86988	RIKEN cDNA A430033K04 gene	protein-coding
common_peak1-10679-12-21--0.810655633549659-0.713635438203849	chr14	54426602	54427357	+	0	NA	Intergenic	Intergenic	141364	NM_001205242	100568452	Mm.213248	NM_001205242		A430107P09Rik	Va10	RIKEN cDNA A430107P09 gene	protein-coding
unique_peak2-36684-12-14--0.25811461052088-0.309074325783021	chr3	32408965	32409710	+	0	NA	promoter-TSS (NM_001161818)	promoter-TSS (NM_001161818)	-135	NM_001161818	67778	Mm.285620	NM_144519		Zfp639	6230400O18Rik|ANC-2H01|ZASC1|Znf639	zinc finger protein 639	protein-coding
unique_peak2-35173-0-6--3.64748585253182-1.56314192529759	chr16	42479687	42480001	+	0	NA	Intergenic	Intergenic	-139080	NM_008083	14432	Mm.1222	NM_008083	ENSMUSG00000047261	Gap43	B-50|Basp2|GAP-43	growth associated protein 43	protein-coding
common_peak2-20891-14-16--0.188246680892695-0.308035960714963	chr11	3895086	3895908	+	0	NA	intron (NM_001177691, intron 1 of 2)	intron (NM_001177691, intron 1 of 2)	5561	NM_001177691	53897	Mm.103414	NM_016922	ENSMUSG00000049721	Gal3st1	Cst|Gcst	galactose-3-O-sulfotransferase 1	protein-coding
common_peak2-28532-34-66--0.684020663456506-1.46887387725851	chr5	137313418	137314771	+	0	NA	intron (NM_024474, intron 2 of 12)	HAL1|LINE|L1	44883	NM_024474	140709	Mm.295020	NM_024474	ENSMUSG00000004415	Col26a1	9430032K24Rik|BC002218|Col26a|Emid2|Emu2	collagen, type XXVI, alpha 1	protein-coding
common_peak2-32396-28-50--0.619466222150033-1.0624982013315	chrX	137037287	137038717	+	0	NA	Intergenic	L1MB3|LINE|L1	39205	NR_122039	14605	Mm.22216	NM_010286	ENSMUSG00000031431	Tsc22d3	DIP|Dsip1|Gilz|TSC-22R|Tilz3	TSC22 domain family, member 3	protein-coding
common_peak1-18282-18-13-0.505564229170747-0.625923329873571	chr8	41016111	41016970	+	0	NA	Intergenic	Intergenic	-288508	NM_001113326	20288	Mm.239291	NM_031195	ENSMUSG00000025044	Msr1	MRS-A|MSR|MSR-A|SR-AI|SR-AII|Scara1|Scvr	macrophage scavenger receptor 1	protein-coding
unique_peak2-36546-3-7--1.41398308995928-1.23214870625617	chr2	165655576	165655989	+	0	NA	intron (NM_001291158, intron 11 of 23)	intron (NM_001291158, intron 11 of 23)	27891	NM_001252585	228880	Mm.227598	NM_027230	ENSMUSG00000039671	Zmynd8	1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7	zinc finger, MYND-type containing 8	protein-coding
unique_peak1-647-11-6-0.701338662194009-1.32595962126035	chr10	44112193	44112855	+	0	NA	Intergenic	Intergenic	33042	NR_035450	100316688		NR_035450		Mir1929	mmu-mir-1929	microRNA 1929	ncRNA
common_peak2-19517-89-98-0.405610134746393-1.33726869565092	chr1	153090773	153093211	+	0	NA	Intergenic	Intergenic	-99636	NM_001039512	117198	Mm.33764	NM_028582	ENSMUSG00000023150	Ivns1abp	1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850	influenza virus NS1A binding protein	protein-coding
unique_peak2-38325-2-6--1.72480917832092-1.26211192963361	chr6	147076246	147076620	+	0	NA	Intergenic	Intergenic	36836	NM_001081237	232539	Mm.491206	NM_001081237	ENSMUSG00000040102	Klhl42	A330079N23Rik|AI450355|C230080I20Rik|Ctb9|Klhdc5|mKIAA1340	kelch-like 42	protein-coding
common_peak2-23661-30-12-1.46923569135078-3.02795537370072	chr15	85422989	85423617	+	0	NA	intron (NR_040433, intron 4 of 4)	intron (NR_040433, intron 4 of 4)	-11052	NM_009528	22422	Mm.306946	NM_009528	ENSMUSG00000022382	Wnt7b	Wnt-7b	wingless-type MMTV integration site family, member 7B	protein-coding
common_peak2-32156-53-88--0.334760418550469-0.696474447554397	chr9	108648611	108650060	+	0	NA	3' UTR (NM_008924, exon 11 of 11)	3' UTR (NM_008924, exon 11 of 11)	-48990	NM_029634	76500	Mm.276336	NM_029634	ENSMUSG00000032599	Ip6k2	1500005N04Rik|AW050208|Ihpk2	inositol hexaphosphate kinase 2	protein-coding
common_peak1-17829-36-30-0.525124775780879-0.956885677565404	chr7	109517843	109519025	+	0	NA	intron (NM_009287, intron 2 of 11)	intron (NM_009287, intron 2 of 11)	-71775	NM_009103	20133	Mm.197486	NM_009103	ENSMUSG00000030978	Rrm1	RnrM1	ribonucleotide reductase M1	protein-coding
common_peak1-10948-17-22--0.305265617851975-0.348739088570342	chr15	25494169	25494978	+	0	NA	Intergenic	Intergenic	-57732	NM_019472	17909	Mm.60590	NM_019472	ENSMUSG00000022272	Myo10	AW048724|D15Ertd600e|mKIAA0799	myosin X	protein-coding
unique_peak2-37109-0-5--3.42509343119537-1.32905871926422	chr4	147275716	147276081	+	0	NA	intron (NM_001285923, intron 2 of 18)	intron (NM_001285923, intron 2 of 18)	2909	NM_001285923	170731	Mm.154312	NM_133201	ENSMUSG00000029020	Mfn2	D630023P19Rik|Fzo	mitofusin 2	protein-coding
unique_peak1-3661-46-2-4.31303344252765-15.1277399922857	chr19	40253355	40255256	+	0	NA	intron (NM_145499, intron 3 of 8)	intron (NM_145499, intron 3 of 8)	7471	NM_145499	226105	Mm.29119	NM_145499	ENSMUSG00000060613	Cyp2c70	-	cytochrome P450, family 2, subfamily c, polypeptide 70	protein-coding
unique_peak1-6741-11-1-2.50869358425161-2.83420869758413	chr8	46652460	46653099	+	0	NA	intron (NM_172752, intron 1 of 22)	ORR1D1|LTR|MaLR	59637	NM_001205219	234214	Mm.211096	NM_172752	ENSMUSG00000031626	Sorbs2	2010203O03Rik|9430041O17Rik|A530071H08|Argbp2|mKIAA0777	sorbin and SH3 domain containing 2	protein-coding
common_peak1-17573-22-21-0.187852486450107-0.376654945067947	chr7	35347910	35348856	+	0	NA	Intergenic	B4A|SINE|B4	89477	NM_146188	233107	Mm.486198	NM_146188	ENSMUSG00000030499	Kctd15	BC031749	potassium channel tetramerisation domain containing 15	protein-coding
unique_peak2-38704-8-7-0.00522241794757061-1.00793137938329	chr7	109671732	109672242	+	0	NA	Intergenic	Lx2A|LINE|L1	-11276	NM_147079	259083	Mm.377828	NM_147079	ENSMUSG00000073979	Olfr547	MOR31-4	olfactory receptor 547	protein-coding
unique_peak2-37003-4-9--1.34538860874061-1.36011389749466	chr3	121724482	121724985	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-22645	NM_007378	11304	Mm.3918	NM_007378	ENSMUSG00000028125	Abca4	AW050280|Abc10|Abcr|D430003I15Rik|RmP	ATP-binding cassette, sub-family A (ABC1), member 4	protein-coding
common_peak1-10056-22-19-0.325356010200042-0.479250674391597	chr13	21362575	21363437	+	0	NA	Intergenic	CYRA11_Mm|Unknown|Y-chromosome	21549	NM_010343	14780	Mm.1332	NM_010343	ENSMUSG00000004344	Gpx5	AV379049|Arep	glutathione peroxidase 5	protein-coding
unique_peak2-37373-7-11--0.785871670422967-1.21681515183528	chr4	137924780	137925369	+	0	NA	Intergenic	Intergenic	-1204	NM_028176	72269	Mm.46182	NM_028176	ENSMUSG00000028755	Cda	2210401N16Rik	cytidine deaminase	protein-coding
common_peak1-19387-12-28--1.20920501003993-1.52081014994907	chrX	42067923	42068617	+	0	NA	Intergenic	Intergenic	75068	NM_001190718	245404	Mm.55685	NM_178739	ENSMUSG00000045284	Dcaf12l1	9330180J20|A230038L21Rik|Decaf12l1|Wdr40b	DDB1 and CUL4 associated factor 12-like 1	protein-coding
common_peak2-22758-12-11-0.0638134843664826-0.337263207250336	chr13	114679940	114680595	+	0	NA	intron (NM_172595, intron 1 of 4)	intron (NM_172595, intron 1 of 4)	95551	NM_172595	218639	Mm.79837	NM_172595	ENSMUSG00000042348	Arl15	A430036I03|Arfrp2|C230032K13Rik	ADP-ribosylation factor-like 15	protein-coding
common_peak1-9040-18-11-0.727956650507195-0.876666802405043	chr11	62813372	62814261	+	0	NA	Intergenic	B3|SINE|B2	49121	NM_025496	66338	Mm.46166	NM_025496	ENSMUSG00000042200	Cdrt4	1700019I23Rik	CMT1A duplicated region transcript 4	protein-coding
common_peak2-28002-27-57--0.866435044232336-1.84665509793009	chr4	45529375	45530757	+	0	NA	intron (NM_001033306, intron 1 of 5)	intron (NM_001033306, intron 1 of 5)	13634	NM_001033306	230126	Mm.251716	NM_001033306	ENSMUSG00000044813	Shb	BC028832	src homology 2 domain-containing transforming protein B	protein-coding
common_peak2-28762-70-117--0.262676132986443-0.666111423730289	chr5	44225952	44227532	+	0	NA	intron (NM_009763, intron 6 of 8)	IAPEz-int|LTR|ERVK	16610	NM_009763	12182	Mm.246332	NM_009763	ENSMUSG00000029082	Bst1	114/A10|A530073F09|BP-3|Bp3|Bsta1|CD157|Ly65	bone marrow stromal cell antigen 1	protein-coding
common_peak1-9013-34-32-0.337674407642813-0.595371917655143	chr11	60777080	60778382	+	0	NA	Intergenic	L1MA4|LINE|L1	32172	NM_008928	26397	Mm.18494	NM_008928	ENSMUSG00000018932	Map2k3	AW212142|MEK3|MKK3|Prkmk3|mMKK3b	mitogen-activated protein kinase kinase 3	protein-coding
unique_peak2-36188-3-5--0.998945590680433-0.96108193396963	chr2	30773322	30773702	+	0	NA	Intergenic	Intergenic	-14695	NM_022415	64292	Mm.28768	NM_022415	ENSMUSG00000050737	Ptges	2410099E23Rik|D2Ertd369e|Pges|mPGES|mPGES-1	prostaglandin E synthase	protein-coding
common_peak2-25352-3-10--1.87341470859657-1.75805390616669	chr18	80170908	80171333	+	0	NA	Intergenic	Intergenic	-72514	NM_053117	93737	Mm.24678	NM_053117	ENSMUSG00000056214	Pard6g	2410049N21Rik|Par6a	par-6 family cell polarity regulator gamma	protein-coding
common_peak2-20611-13-10-0.319040412000471-0.446472590016315	chr10	80071918	80072368	+	0	NA	TTS (NR_105877)	TTS (NR_105877)	138	NR_105877	102465550		NR_105877		Mir6912	mmu-mir-6912	microRNA mir-6912	ncRNA
unique_peak1-7225-8-2-1.42025991722641-1.65811743852845	chr9	71698480	71698985	+	0	NA	intron (NM_001253862, intron 18 of 19)	B3|SINE|B2	45171	NM_001253864	21406	Mm.171615	NM_011544	ENSMUSG00000032228	Tcf12	A130037E08Rik|ALF1|HEB|HEBAlt|HTF-4|HTF4|ME1|REB|bHLHb20	transcription factor 12	protein-coding
unique_peak1-2362-11-1-2.50869358425161-2.83420869758413	chr15	87646763	87647276	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-20646	NR_105817	102465209		NR_105817	miRBase:MI0021927	Mir6393	mmu-mir-6393	microRNA mir-6393	ncRNA
unique_peak2-36988-1-5--2.2120195109379-1.32905871926422	chr3	121372228	121372611	+	0	NA	Intergenic	Intergenic	-1262	NM_001033814	619318	Mm.371258	NM_001033814		4930432M17Rik	-	RIKEN cDNA 4930432M17 gene	protein-coding
unique_peak1-2188-10-4-1.03448725012141-1.5150158574804	chr15	64191530	64192053	+	0	NA	intron (NM_001276467, intron 1 of 29)	intron (NM_001276467, intron 1 of 29)	22690	NM_001276461	13196	Mm.277236	NM_010026	ENSMUSG00000022377	Asap1	AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19	ArfGAP with SH3 domain, ankyrin repeat and PH domain1	protein-coding
common_peak1-10652-36-53--0.275566415995714-0.442998361601932	chr14	47373466	47374741	+	0	NA	Intergenic	RMER1B|Other|Other	-6113	NM_028222	72391	Mm.272394	NM_028222	ENSMUSG00000037628	Cdkn3	2410006H10Rik|KAP	cyclin-dependent kinase inhibitor 3	protein-coding
unique_peak2-37318-7-7--0.200909169701811-0.97990265578305	chr4	126168114	126168568	+	0	NA	3' UTR (NM_153177, exon 18 of 18)	3' UTR (NM_153177, exon 18 of 18)	-22676	NM_153403	236511	Mm.30800	NM_153403	ENSMUSG00000041530	Ago1	Eif2c1	argonaute RISC catalytic subunit 1	protein-coding
common_peak2-22455-58-105--0.431970519672702-1.10148637837015	chr13	43480288	43481967	+	0	NA	intron (NM_178848, intron 7 of 7)	B1_Mus2|SINE|Alu	-12618	NM_023554	70078	Mm.439927	NM_023554	ENSMUSG00000063200	Nol7	2210008F15Rik|5730556I21Rik|NOP27|RARG-1	nucleolar protein 7	protein-coding
common_peak2-21442-47-41-0.542524001987787-1.15813009484044	chr11	86593188	86594724	+	0	NA	intron (NM_026191, intron 12 of 17)	ORR1A4|LTR|MaLR	-22962	NM_001003908	67300	Mm.254588	NM_001003908	ENSMUSG00000047126	Cltc	3110065L21Rik|CHC|R74732	clathrin, heavy polypeptide (Hc)	protein-coding
common_peak2-26951-9-10--0.269818212233077-1.05503135781948	chr2	164785921	164786399	+	0	NA	Intergenic	Intergenic	-7328	NM_020333	57138	Mm.252987	NM_020333	ENSMUSG00000017740	Slc12a5	KCC2|mKIAA1176	solute carrier family 12, member 5	protein-coding
common_peak2-29158-11-10-0.0492619656143161-0.31137425193576	chr5	129887356	129887923	+	0	NA	Intergenic	Intergenic	-119467	NM_172276	231769	Mm.288714	NM_172276	ENSMUSG00000029439	Sfswap	1190005N23Rik|6330437E22Rik|AI197402|AW212079|SWAP|Sfrs8|Srsf8	splicing factor, suppressor of white-apricot homolog (Drosophila)	protein-coding
common_peak2-26330-13-25--0.921967687503323-0.983972868822056	chr2	34771148	34771802	+	0	NA	Intergenic	Intergenic	-1979	NM_028716	74016	Mm.65691	NM_028716	ENSMUSG00000026873	Phf19	3110009G19Rik|3321402G02Rik	PHD finger protein 19	protein-coding
unique_peak2-35740-4-6--0.830815435910851-0.989110657569874	chr18	36521759	36522119	+	0	NA	intron (NM_001081365, intron 1 of 2)	ID4|SINE|ID	13661	NM_001081365	66060	Mm.272527	NM_001081365		Cystm1	0610010O12Rik	cysteine-rich transmembrane module containing 1	protein-coding
common_peak2-21663-16-11-0.533301141546906-0.58239619684445	chr11	103094085	103094669	+	0	NA	intron (NM_016896, intron 6 of 15)	intron (NM_016896, intron 6 of 15)	-14631	NM_177801	328019	Mm.189646	NM_177801	ENSMUSG00000044787	Spata32	4933400C05Rik|VAD1.2	spermatogenesis associated 32	protein-coding
unique_peak1-165-41-4-3.3792206099613-10.9005940748211	chr1	74024457	74026304	+	0	NA	intron (NM_001289895, intron 18 of 32)	intron (NM_001289895, intron 18 of 32)	-114340	NR_045311	109198	Mm.359721	NR_045311		6030407O03Rik	-	RIKEN cDNA 6030407O03 gene	ncRNA
unique_peak2-38408-0-7--3.84013093047421-1.80617997398389	chr7	19910980	19911342	+	0	NA	Intergenic	Intergenic	-15767	NM_008036	14282	Mm.248335	NM_008036	ENSMUSG00000003545	Fosb	-	FBJ osteosarcoma oncogene B	protein-coding
unique_peak2-35361-2-5--1.50241675698448-1.08602067057793	chr17	26638565	26638881	+	0	NA	Intergenic	Intergenic	6694	NM_013642	19252	Mm.239041	NM_013642	ENSMUSG00000024190	Dusp1	3CH134|MKP1|Ptpn16|U19515|erp|mkp-1	dual specificity phosphatase 1	protein-coding
common_peak1-11061-16-9-0.796335547380699-0.844317084070804	chr15	56764706	56765412	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-238958	NM_008216	15117	Mm.5148	NM_008216	ENSMUSG00000022367	Has2	-	hyaluronan synthase 2	protein-coding
common_peak2-21031-41-36-0.49169533921971-0.936258361511365	chr11	32604765	32605761	+	0	NA	intron (NM_001271347, intron 2 of 12)	intron (NM_001271347, intron 2 of 12)	62708	NM_001271347	103583	Mm.28017	NM_134015	ENSMUSG00000020271	Fbxw11	2310065A07Rik|AA536858|BTRC2|BTRCP2|Fbxw1b|HOS	F-box and WD-40 domain protein 11	protein-coding
unique_peak1-3644-12-2-2.06381348436648-2.79529063155376	chr19	38504586	38505224	+	0	NA	Intergenic	Intergenic	34435	NM_175507	240660	Mm.262085	NM_175507	ENSMUSG00000044026	Slc35g1	AA590464|D330039I19Rik|Tmem20	solute carrier family 35, member G1	protein-coding
common_peak1-17348-51-42-0.648659070900475-1.55729322517715	chr7	127008217	127009785	+	0	NA	intron (NM_001163703, intron 1 of 2)	intron (NM_001163703, intron 1 of 2)	29971	NM_173408	233805	Mm.31539	NM_173408	ENSMUSG00000048787	Dcun1d3	1700020A13Rik|BC030335	DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)	protein-coding
unique_peak1-6772-15-8-0.842239749113344-0.891319708951327	chr8	61573559	61574363	+	0	NA	Intergenic	Lx7|LINE|L1	183409	NM_173411	234290	Mm.39244	NM_173411	ENSMUSG00000049946	BC030500	-	cDNA sequence BC030500	protein-coding
common_peak1-14518-11-4-1.18676548936425-1.68134727924692	chr3	27617639	27618321	+	0	NA	Intergenic	Intergenic	-8619	NM_173182	72007	Mm.38832	NM_173182	ENSMUSG00000039286	Fndc3b	1600019O04Rik|AW550168|Fad104|mKIAA4164	fibronectin type III domain containing 3B	protein-coding
common_peak1-16071-10-9-0.0344872501214071-1.05503135781948	chr5	52910148	52910741	+	0	NA	Intergenic	MT2A|LTR|ERVL	47075	NM_144945	246316	Mm.44721	NM_144945	ENSMUSG00000039252	Lgi2	mKIAA1916	leucine-rich repeat LGI family, member 2	protein-coding
common_peak2-26684-99-142-0.059486406504262-0.337597834806264	chr2	125122599	125124118	+	0	NA	Intergenic	Intergenic	50107	NM_023595	110074	Mm.282499	NM_023595	ENSMUSG00000027203	Dut	5031412I06Rik|5133400F09Rik|D2Bwg0749e|Dutp|dUTPase	deoxyuridine triphosphatase	protein-coding
unique_peak1-3838-11-5-0.923731083530457-1.477227296591	chr2	4389327	4389971	+	0	NA	intron (NM_172475, intron 2 of 22)	intron (NM_172475, intron 2 of 22)	67627	NM_001177843	209630	Mm.37932	NM_172475	ENSMUSG00000026657	Frmd4a	2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|OTTMUSG00000010806|mKIAA1294	FERM domain containing 4A	protein-coding
common_peak1-18617-51-193--1.52498901658455-14.1353308153421	chr8	108703873	108705232	+	0	NA	intron (NM_178798, intron 2 of 9)	intron (NM_178798, intron 2 of 9)	11777	NM_178798	330836	Mm.46749	NM_178798	ENSMUSG00000031904	Slc7a6	AI643885|LAT-2|LAT3	solute carrier family 7 (cationic amino acid transporter, y+ system), member 6	protein-coding
common_peak2-30163-9-8-0.0196884049619079-1.03275496310833	chr6	147092224	147092645	+	0	NA	Intergenic	Intergenic	-36329	NR_033640	100039641	Mm.170402	NR_033640	ENSMUSG00000085600	E330012B07Rik	Gm15768|OTTMUSG00000026071	RIKEN cDNA E330012B07 gene	ncRNA
common_peak2-20001-9-8-0.0196884049619079-1.03275496310833	chr1	134405903	134406323	+	0	NA	TTS (NM_029025)	TTS (NM_029025)	3306	NM_029025	74626	Mm.34611	NM_029025	ENSMUSG00000048174	Tmem81	4930429O20Rik|AI465369	transmembrane protein 81	protein-coding
common_peak2-22095-12-8-0.478850983645327-0.562038191119709	chr12	79945307	79945906	+	0	NA	intron (NM_023721, intron 8 of 8)	MER44B|DNA|MER2_type	17019	NM_023721	73834	Mm.491124	NM_023721	ENSMUSG00000021114	Atp6v1d	1110004P10Rik|Atp6m|VATD|Vma8	ATPase, H+ transporting, lysosomal V1 subunit D	protein-coding
common_peak2-28570-37-79--0.795935023401544-2.21542829695182	chr5	8422057	8423411	+	0	NA	promoter-TSS (NM_013726)	promoter-TSS (NM_013726)	-18	NM_001190717	27214	Mm.292470	NM_013726	ENSMUSG00000002297	Dbf4	AA545217|Ask	DBF4 homolog (S. cerevisiae)	protein-coding
unique_peak1-2590-7-0-2.79909083029819-2.40823996531185	chr16	31364598	31365013	+	0	NA	Intergenic	Intergenic	-49911	NM_001301354	11815	Mm.2082	NM_007470	ENSMUSG00000022548	Apod	-	apolipoprotein D	protein-coding
common_peak2-21917-20-9-1.16614668970383-1.52222891542741	chr12	16853535	16854005	+	0	NA	Intergenic	Intergenic	35999	NM_033270	50496	Mm.23296	NM_033270	ENSMUSG00000057469	E2f6	AI462434|E2F6b|EMA	E2F transcription factor 6	protein-coding
common_peak2-32002-12-9-0.326847890200276-0.459837087125828	chr9	71663796	71664219	+	0	NA	Intergenic	ID_B1|SINE|B4	-44598	NM_026599	68178	Mm.99961	NM_026599	ENSMUSG00000032232	Cgnl1	4933421H10Rik|9930020M10Rik|AI503810|Jacop	cingulin-like 1	protein-coding
common_peak1-15076-15-9-0.690236655668294-0.732381977911291	chr3	126921060	126921675	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	57144	NR_105029	100862268	Mm.444603	NR_105029	ENSMUSG00000097456	LOC100862268	-	uncharacterized LOC100862268	ncRNA
unique_peak1-820-14-3-1.89921616035764-2.80787975886178	chr11	6274227	6274924	+	0	NA	Intergenic	Intergenic	-20553	NM_001005867	52915	Mm.1144	NM_028601	ENSMUSG00000041164	Zmiz2	Zimp7	zinc finger, MIZ-type containing 2	protein-coding
common_peak1-7438-18-17-0.142994149786039-0.353907621462753	chr1	165281676	165282542	+	0	NA	Intergenic	AT_rich|Low_complexity|Low_complexity	-38328	NM_175686	18933	Mm.288642	NM_011127	ENSMUSG00000026586	Prrx1	A230024N07Rik|AA755424|AI385634|AI843499|K-2|Pmx|Pmx1|Prx1|mHox	paired related homeobox 1	protein-coding
unique_peak1-6582-6-2-0.980435609659146-1.26211192963361	chr7	142474578	142475073	+	0	NA	Intergenic	Intergenic	14523	NM_001163611	100043254	Mm.192092	NM_001163611	ENSMUSG00000073804	Nps	ENSMUSG00000073804	neuropeptide S	protein-coding
common_peak1-14396-9-8-0.0196884049619079-1.03275496310833	chr2	173247728	173248250	+	0	NA	Intergenic	MTA_Mm-int|LTR|MaLR	-100104	NM_028158	72221	Mm.46132	NM_028158	ENSMUSG00000027518	1700021F07Rik	-	RIKEN cDNA 1700021F07 gene	protein-coding
unique_peak2-33352-6-9--0.75652998450706-1.11707584880836	chr11	30985890	30986325	+	0	NA	intron (NM_023906, intron 9 of 9)	intron (NM_023906, intron 9 of 9)	-99742	NM_001290667	68044	Mm.32656	NM_026527	ENSMUSG00000020309	Chac2	-	ChaC, cation transport regulator 2	protein-coding
unique_peak1-2996-10-3-1.35641534500877-1.75805390616669	chr17	83527666	83528165	+	0	NA	Intergenic	L2a|LINE|L2	-50350	NR_045094	100503434	Mm.187281	NR_045094		Gm19689	-	predicted gene, 19689	ncRNA
common_peak2-20255-16-38--1.16713857659419-2.08714016986896	chr1	185328559	185329441	+	0	NA	Intergenic	Intergenic	444081	NM_016928	53791	Mm.116894	NM_016928	ENSMUSG00000079164	Tlr5	-	toll-like receptor 5	protein-coding
unique_peak2-35783-4-8--1.19338551529556-1.21878474469819	chr18	54911696	54912113	+	0	NA	Intergenic	(TTTTG)n|Simple_repeat|Simple_repeat	140506	NR_045400	328957	Mm.402781	NR_045400		9330117O12Rik	9330117O12	RIKEN cDNA 9330117O12 gene	ncRNA
common_peak1-17960-75-89-0.24721389541361-0.660493963649647	chr7	130519284	130520805	+	0	NA	Intergenic	Intergenic	-1452	NM_025304	30949	Mm.260527	NM_025304	ENSMUSG00000030763	Lcmt1	AL033290|LCMT-1|Lcmt	leucine carboxyl methyltransferase 1	protein-coding
common_peak2-25219-16-6-1.31090872021046-1.49151883326344	chr18	61614000	61614490	+	0	NA	Intergenic	Intergenic	30016	NR_045419	442846	Mm.417648	NR_045419		A530050N04Rik	-	RIKEN cDNA A530050N04 gene	ncRNA
common_peak2-21537-44-45-0.298330878511522-0.60830192689697	chr11	95777438	95778937	+	0	NA	Intergenic	(TTTC)n|Simple_repeat|Simple_repeat	-2002	NM_008081	14422	Mm.340702	NM_008081		B4galnt2	AI593864|Dlb-1|Dlb1|Galg2|Galgt2|Ggm3|Igf2bp1	beta-1,4-N-acetyl-galactosaminyl transferase 2	protein-coding
unique_peak2-32481-5-9--1.02630843089322-1.21398586181642	chr1	36307781	36308155	+	0	NA	Intergenic	MTB_Mm|LTR|MaLR	-6821	NM_198899	320011	Mm.261022	NM_198899	ENSMUSG00000037470	Uggt1	0910001L17Rik|A930007H10Rik|AA589501|AI414429|AI448372|C820010P03Rik|GT|UGT1|Ugcgl1	UDP-glucose glycoprotein glucosyltransferase 1	protein-coding
common_peak1-17533-43-55--0.024791736533901-0.301029995663988	chr7	28824764	28826089	+	0	NA	Intergenic	Intergenic	9685	NM_011874	23996	Mm.29582	NM_011874	ENSMUSG00000030603	Psmc4	CIP21|MIP224	proteasome (prosome, macropain) 26S subunit, ATPase, 4	protein-coding
common_peak1-10071-38-47--0.0135098414226258-0.303315798308572	chr13	23530168	23531707	+	0	NA	Intergenic	Intergenic	-8051	NR_015492	320842	Mm.487476	NR_015492	ENSMUSG00000085024	C230035I16Rik	-	RIKEN cDNA C230035I16 gene	ncRNA
unique_peak2-34874-7-4-0.477162735410827-1.09384600808989	chr15	78077785	78078156	+	0	NA	intron (NM_008677, intron 1 of 9)	intron (NM_008677, intron 1 of 9)	2729	NM_008677	17972	Mm.2068	NM_008677	ENSMUSG00000071715	Ncf4	AI451400|p40phox	neutrophil cytosolic factor 4	protein-coding
common_peak1-16085-18-11-0.727956650507195-0.876666802405043	chr5	64325670	64326519	+	0	NA	intron (NM_145923, intron 3 of 6)	MLT1A1|LTR|MaLR	34042	NM_145923	100532	Mm.243632	NM_145923	ENSMUSG00000047881	Rell1	AA536743	RELT-like 1	protein-coding
common_peak2-31074-26-29-0.0210084965499435-0.304710633611964	chr8	23149373	23150267	+	0	NA	intron (NM_007511, intron 1 of 20)	intron (NM_007511, intron 1 of 20)	20726	NM_007511	11979	Mm.87854	NM_007511	ENSMUSG00000006567	Atp7b	Atp7a|WND|tx	ATPase, Cu++ transporting, beta polypeptide	protein-coding
unique_peak2-36727-4-6--0.830815435910851-0.989110657569874	chr3	57075982	57076375	+	0	NA	Intergenic	Intergenic	29663	NM_008536	17112	Mm.856	NM_008536	ENSMUSG00000027800	Tm4sf1	L6|M3s1	transmembrane 4 superfamily member 1	protein-coding
common_peak2-21713-25-22-0.338287949288093-0.51032171069054	chr11	108365355	108366060	+	0	NA	intron (NM_029606, intron 11 of 27)	intron (NM_029606, intron 11 of 27)	79127	NM_029606	76380	Mm.344071	NM_029586	ENSMUSG00000020728	Cep112	1700001M19Rik|1700029K01Rik|8430407H02Rik|AV043680|AV207351|Ccdc46|Macoco	centrosomal protein 112	protein-coding
unique_peak2-38463-0-7--3.84013093047421-1.80617997398389	chr7	28918118	28918501	+	0	NA	intron (NM_001164655, intron 3 of 19)	intron (NM_001164655, intron 3 of 19)	3824	NM_001164655	319482	Mm.483194	NM_176924	ENSMUSG00000078776	9530053A07Rik	FCGBP	RIKEN cDNA 9530053A07 gene	protein-coding
common_peak2-25155-11-22--1.0148683718054-1.11267835143409	chr18	49755742	49756423	+	0	NA	Intergenic	L2|LINE|L2	73139	NR_033785	67321	Mm.245802	NR_033785		1700044K03Rik	-	RIKEN cDNA 1700044K03 gene	ncRNA
common_peak1-13723-28-22-0.529397163764449-0.781990829058356	chr2	30967254	30968423	+	0	NA	intron (NM_001038700, intron 1 of 14)	B3A|SINE|B2	-15818	NM_001177650	14269	Mm.52297	NM_019406	ENSMUSG00000075415	Fnbp1	1110057E06Rik|2210010H06Rik|FBP1|Fbp17	formin binding protein 1	protein-coding
unique_peak2-32612-2-6--1.72480917832092-1.26211192963361	chr1	105662941	105663319	+	0	NA	Intergenic	Intergenic	-1002266	NM_011800	23836	Mm.103640	NM_011800	ENSMUSG00000050840	Cdh20	Cdh7	cadherin 20	protein-coding
unique_peak2-36769-1-25--4.32749672835784-6.28700305248716	chr3	67096749	67097477	+	0	NA	intron (NM_025822, intron 7 of 9)	intron (NM_025822, intron 7 of 9)	-80906	NM_010801	17349	Mm.10414	NM_010801	ENSMUSG00000048416	Mlf1	HLS7	myeloid leukemia factor 1	protein-coding
unique_peak2-32543-4-15--2.02346051385325-2.4322161449009	chr1	71102172	71102890	+	0	NA	intron (NM_007525, intron 6 of 10)	(CA)n|Simple_repeat|Simple_repeat	47015	NM_007525	12021	Mm.10764	NM_007525	ENSMUSG00000026196	Bard1	ENSMUSG00000060893|ENSMUSG00000073653	BRCA1 associated RING domain 1	protein-coding
common_peak2-29442-14-12-0.198776442216552-0.373562084705529	chr6	17306193	17306775	+	0	NA	Intergenic	Intergenic	48844	NM_001243064	12389	Mm.28278	NM_007616	ENSMUSG00000007655	Cav1	Cav|Cav-1	caveolin 1, caveolae protein	protein-coding
common_peak2-28831-20-18-0.240147271147608-0.388034239052786	chr5	66165261	66165967	+	0	NA	intron (NM_001024917, intron 2 of 19)	intron (NM_001024917, intron 2 of 19)	10854	NM_001024917	333789	Mm.332398	NM_001024917	ENSMUSG00000037795	N4bp2	B3bp|E430014I16|Gm1791|Gm868	NEDD4 binding protein 2	protein-coding
common_peak2-23235-25-27-0.0544949832875021-0.316543811862083	chr15	8168877	8169609	+	0	NA	exon (NM_001162906, exon 27 of 53)	exon (NM_001162906, exon 27 of 53)	50137	NM_001162906	73692	Mm.164436	NM_001162906	ENSMUSG00000039801	2410089E03Rik	4732468D17Rik|b2b012Clo	RIKEN cDNA 2410089E03 gene	protein-coding
unique_peak1-6696-18-3-2.31291915122835-3.35694334496952	chr8	33884956	33885810	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	175115	NM_001177589	100042715	Mm.291093	NM_001177589		Gm3985	-	predicted gene 3985	protein-coding
common_peak2-24045-18-19--0.00900894365901106-0.306598483909153	chr16	25399949	25400813	+	0	NA	intron (NM_175165, intron 4 of 5)	L1_Mus4|LINE|L1	113478	NM_175165	71338	Mm.126851	NM_175165	ENSMUSG00000048399	Tprg	5430420C16Rik|Tprg1	transformation related protein 63 regulated	protein-coding
common_peak2-31895-9-10--0.269818212233077-1.05503135781948	chr9	57148324	57148844	+	0	NA	Intergenic	Intergenic	-38178	NM_028820	74211	Mm.428905	NM_028820	ENSMUSG00000032300	1700017B05Rik	AA682102|D9Ertd278e	RIKEN cDNA 1700017B05 gene	protein-coding
unique_peak1-144-13-0-3.77847203063777-4.51544993495972	chr1	71723900	71724452	+	0	NA	Intergenic	URR1B|DNA|MER1_type	24267	NR_040308	100042814	Mm.405775	NR_040308	ENSMUSG00000073652	Apol7d	ENSMUSG00000073652|Gm15456|OTTMUSG00000022136	apolipoprotein L 7d	ncRNA
unique_peak2-32482-7-20--1.59322659248057-1.71830443967823	chr1	36470932	36471722	+	0	NA	intron (NM_001277076, intron 37 of 52)	(TC)n|Simple_repeat|Simple_repeat	30757	NM_001013374	214895	Mm.287854	NM_001013374	ENSMUSG00000001143	Lman2l	A630028F14Rik|VIP36-like|VIPL	lectin, mannose-binding 2-like	protein-coding
unique_peak1-4518-7-4-0.477162735410827-1.09384600808989	chr3	27718597	27719096	+	0	NA	Intergenic	L1Md_F|LINE|L1	76444	NM_001164437	208613	Mm.59189	NM_001164437	ENSMUSG00000043164	Tmem212	E030011K20Rik|Gm564	transmembrane protein 212	protein-coding
common_peak1-9309-14-16--0.188246680892695-0.308035960714963	chr11	94210328	94211114	+	0	NA	intron (NM_029600, intron 29 of 30)	ORR1B1|LTR|MaLR	21406	NM_146024	71452	Mm.141054	NM_027799	ENSMUSG00000020864	Ankrd40	1110011C06Rik|5530600A18Rik|Gcap15	ankyrin repeat domain 40	protein-coding
common_peak2-24544-13-6-0.971117108580164-1.01572999746118	chr17	27839398	27839898	+	0	NA	exon (NM_011861, exon 3 of 10)	exon (NM_011861, exon 3 of 10)	17464	NM_178365	23969	Mm.4926	NM_011861	ENSMUSG00000040276	Pacsin1	A830061D09Rik|H74|mKIAA1379|syndapin	protein kinase C and casein kinase substrate in neurons 1	protein-coding
common_peak2-26028-15-13-0.204809828498052-0.368541233333383	chr19	60581242	60581659	+	0	NA	Intergenic	MER5A|DNA|MER1_type	-37243	NM_201615	226278	Mm.377241	NM_201615	ENSMUSG00000045052	Prlhr	Gm339|Gpr10|Gr3|Prrpr	prolactin releasing hormone receptor	protein-coding
common_peak2-26981-42-72--0.447495231012834-0.8613235380043	chr2	167688414	167689844	+	0	NA	Intergenic	Intergenic	-68698	NM_011201	19246	Mm.277916	NM_011201	ENSMUSG00000027540	Ptpn1	PTP-1B|PTP-HA2|PTP1B	protein tyrosine phosphatase, non-receptor type 1	protein-coding
common_peak2-29649-10-6-0.549060422951165-1.21398586181642	chr6	67106052	67106429	+	0	NA	Intergenic	MTEb|LTR|MaLR	-110733	NM_001113564	66870	Mm.240490	NM_025814	ENSMUSG00000036371	Serbp1	1200009K13Rik|9330147J08Rik|AL022786|Pairbp1	serpine1 mRNA binding protein 1	protein-coding
unique_peak1-4796-6-3-0.565398110380302-1.08602067057793	chr3	132874259	132874780	+	0	NA	intron (NM_029953, intron 1 of 3)	intron (NM_029953, intron 1 of 3)	23334	NM_029953	77669	Mm.98630	NM_029953	ENSMUSG00000040969	Arhgef38	9130221D24Rik	Rho guanine nucleotide exchange factor (GEF) 38	protein-coding
common_peak2-27563-26-24-0.284042902383738-0.446094173747083	chr3	97901162	97901646	+	0	NA	intron (NM_010928, intron 5 of 33)	intron (NM_010928, intron 5 of 33)	-63331	NM_027665	71078	Mm.50711	NM_027665	ENSMUSG00000043468	Adam30	4933424D07Rik|svph4	a disintegrin and metallopeptidase domain 30	protein-coding
common_peak2-28081-31-56--0.607651343351618-1.1498986797243	chr4	82858918	82860039	+	0	NA	Intergenic	PB1D10|SINE|Alu	110615	NM_027238	69863	Mm.5540	NM_025782	ENSMUSG00000038172	Ttc39b	1810054D07Rik|9130422G05Rik|AI450603|AV103077|AW215585	tetratricopeptide repeat domain 39B	protein-coding
common_peak1-16389-12-11-0.0638134843664826-0.337263207250336	chr5	124007248	124007911	+	0	NA	intron (NM_029929, intron 7 of 12)	B3|SINE|B2	15445	NM_029929	77573	Mm.41372	NM_029929	ENSMUSG00000029434	Vps33a	3830421M04Rik|AI503300|AW048546|AW554476|bf	vacuolar protein sorting 33A (yeast)	protein-coding
common_peak2-27306-21-67--1.5179735759841-4.89407448190068	chr3	63563292	63564473	+	0	NA	intron (NM_001177733, intron 5 of 23)	intron (NM_001177733, intron 5 of 23)	91031	NM_001177733	269437	Mm.316391	NM_183191	ENSMUSG00000036834	Plch1	BC042549|PLCeta1|Plcl3	phospholipase C, eta 1	protein-coding
common_peak2-23597-208-239-0.602574831102815-5.96878013539457	chr15	80254325	80256631	+	0	NA	Intergenic	Intergenic	135422	NM_001163189	383075	Mm.297626	NM_001163189	ENSMUSG00000050439	Enthd1	Gm1242|Gm86	ENTH domain containing 1	protein-coding
common_peak2-26883-38-47--0.0135098414226258-0.303315798308572	chr2	157006117	157007699	+	0	NA	intron (NM_001139516, intron 11 of 12)	L1Md_F2|LINE|L1	23362	NM_011249	19650	Mm.244671	NM_011249	ENSMUSG00000027641	Rbl1	AW547426|PRB1|p107	retinoblastoma-like 1 (p107)	protein-coding
common_peak1-10416-27-19-0.669617856007873-1.02859851787301	chr13	98545443	98546798	+	0	NA	Intergenic	Intergenic	216165	NR_046157	328314	Mm.138047	NR_046157		Gm5086	B230311A21|EG328314	predicted gene 5086	ncRNA
common_peak1-18405-14-16--0.188246680892695-0.308035960714963	chr8	72189834	72190498	+	0	NA	Intergenic	Intergenic	11711	NM_001177527	636741	Mm.480188	NM_001177527	ENSMUSG00000091764	Zfp964	4732490P12|EG636741|Gm7187	zinc finger protein 964	protein-coding
common_peak2-23009-11-7-0.508693584251613-1.21681515183528	chr14	61723375	61723880	+	0	NA	Intergenic	Intergenic	-33667	NM_172809	50720	Mm.440703	NM_015788	ENSMUSG00000048279	Sacs	A230052M14|DNAJC29|E130115J16Rik|mKIAA0730	sacsin	protein-coding
common_peak1-12811-19-14-0.495796731053168-0.607095980551316	chr18	67311484	67312445	+	0	NA	intron (NM_010307, intron 4 of 11)	intron (NM_010307, intron 4 of 11)	18750	NM_010307	14680	Mm.440746	NM_010307	ENSMUSG00000024524	Gnal	2610011C15Rik|9630020G10Rik|Galphaolf|Gna10|Golf	guanine nucleotide binding protein, alpha stimulating, olfactory type	protein-coding
unique_peak1-3496-16-4-1.7963355473807-2.18192634393779	chr19	12464418	12465197	+	0	NA	Intergenic	Intergenic	-3948	NM_146684	258679	Mm.271520	NM_146684	ENSMUSG00000046650	Olfr1440	MOR215-1	olfactory receptor 1440	protein-coding
unique_peak2-39867-3-8--1.58390809140159-1.39487600375387	chrX	73716243	73716582	+	0	NA	Intergenic	RMER19C|LTR|ERVK	77723	NM_001033799	619294	Mm.423961	NM_001033799	ENSMUSG00000073085	4930428D18Rik	-	RIKEN cDNA 4930428D18 gene	protein-coding
unique_peak2-35331-11-13--0.298661337805991-0.337263207250336	chr17	23550421	23551111	+	0	NA	Intergenic	MMERVK10C-int|LTR|ERVK	28996	NM_001104580	619697	Mm.469848	NM_001104580	ENSMUSG00000090966	Vmn2r116	EG619697|V2Rp5	vomeronasal 2, receptor 116	protein-coding
unique_peak2-33610-7-5-0.214128329577033-1.01466476204226	chr11	94602176	94602510	+	0	NA	Intergenic	RLTR14-int|LTR|ERV1	20153	NM_001105561	217122	Mm.24063	NM_183153		Gm11545	A430060F13Rik|C86086|OTTMUSG00000002043	predicted gene 11545	protein-coding
unique_peak1-5041-10-6-0.549060422951165-1.21398586181642	chr4	133569796	133570488	+	0	NA	intron (NM_145833, intron 2 of 3)	intron (NM_145833, intron 2 of 3)	4589	NM_145833	83557	Mm.302567	NM_145833	ENSMUSG00000050966	Lin28a	AL024421|ENSMUSG00000070700|Gm10299|Lin-28|Lin28|Tex17|lin-28A	lin-28 homolog A (C. elegans)	protein-coding
unique_peak1-4244-21-5-1.98452676454508-3.24127775360835	chr2	126950180	126951059	+	0	NA	exon (NM_144818, exon 6 of 18)	exon (NM_144818, exon 6 of 18)	9071	NM_144818	215387	Mm.29786	NM_144818	ENSMUSG00000034906	Ncaph	A730011O11Rik|Brrn1|HCAP-H|mKIAA0074	non-SMC condensin I complex, subunit H	protein-coding
unique_peak2-39881-6-13--1.2419568116773-1.58711810488664	chrX	74367865	74368717	+	0	NA	Intergenic	Intergenic	-388275	NM_020601	21372	Mm.258476	NM_020601	ENSMUSG00000025246	Tbl1x	5330429M20|Tbl1	transducin (beta)-like 1 X-linked	protein-coding
common_peak2-22004-39-62--0.361518676580763-0.632401539335832	chr12	55398175	55399600	+	0	NA	Intergenic	MusHAL1|LINE|L1	64285	NR_108033	73592	Mm.416874	NR_108033		1700104L18Rik	-	RIKEN cDNA 1700104L18 gene	ncRNA
unique_peak1-2274-7-2-1.21412832957703-1.45399745587252	chr15	78531551	78532023	+	0	NA	intron (NM_183141, intron 1 of 1)	ID_B1|SINE|B4	16756	NM_183141	207393	Mm.323188	NM_183141	ENSMUSG00000043460	Elfn2	6330514E13|AW048948|BC094219|Lrrc62|Ppp1r29	leucine rich repeat and fibronectin type III, extracellular 2	protein-coding
common_peak2-28884-14-22--0.624345795699369-0.590343908676233	chr5	88553526	88554312	+	0	NA	Intergenic	RLTR13D1|LTR|ERVK	38338	NM_001252680	20600	Mm.1397	NM_021289	ENSMUSG00000029281	Smr2	MSG2|Vcs2	submaxillary gland androgen regulated protein 2	protein-coding
common_peak1-16940-96-108-0.397866889578403-1.42161708034464	chr6	83455600	83457504	+	0	NA	intron (NM_001162521, intron 1 of 5)	intron (NM_001162521, intron 1 of 5)	411	NM_013764	27369	Mm.42234	NM_013764	ENSMUSG00000014554	Dguok	dGK|dGK1|dGK2|dGK3	deoxyguanosine kinase	protein-coding
unique_peak1-5740-11-2-1.92373108353046-2.32232533660526	chr6	47326168	47326852	+	0	NA	Intergenic	RMER16|LTR|ERVK	-77813	NM_012042	26965	Mm.87611	NM_012042	ENSMUSG00000029686	Cul1	-	cullin 1	protein-coding
unique_peak2-34137-7-12--0.901348887842903-1.31827279259406	chr13	23575775	23576281	+	0	NA	intron (NM_001289614, intron 3 of 6)	intron (NM_001289614, intron 3 of 6)	4698	NM_001289615	238555	Mm.129668	NM_175938		Btn2a2	Btn2|D030063K05	butyrophilin, subfamily 2, member A2	protein-coding
common_peak2-19832-4-6--0.830815435910851-0.989110657569874	chr1	90288910	90289275	+	0	NA	Intergenic	RMER1A|Other|Other	-14502	NM_029269	75396	Mm.173058	NM_029269	ENSMUSG00000026295	Spp2	0610038O04Rik|pp-24|spp24	secreted phosphoprotein 2	protein-coding
common_peak1-7779-35-38-0.145968039600255-0.368093376636814	chr1	93680314	93681193	+	0	NA	Intergenic	Intergenic	-17301	NM_007855	13345	Mm.9474	NM_007855	ENSMUSG00000007805	Twist2	Dermo1|bHLHa39	twist basic helix-loop-helix transcription factor 2	protein-coding
common_peak1-12865-86-41-1.58331837125359-10.1502154002245	chr18	75901019	75903014	+	0	NA	Intergenic	Lx8|LINE|L1	-44666	NM_201354	269037	Mm.36745	NM_201354	ENSMUSG00000052928	Ctif	Gm672	CBP80/20-dependent translation initiation factor	protein-coding
common_peak2-26620-27-28-0.133564955767664-0.358978896303361	chr2	118388581	118389334	+	0	NA	Intergenic	Intergenic	-13543	NM_138313	171543	Mm.210125	NM_138313	ENSMUSG00000040093	Bmf	AW260063|AW411872	BCL2 modifying factor	protein-coding
unique_peak1-2539-6-0-2.5653981103803-2.10720996964787	chr16	21865952	21866385	+	0	NA	Intergenic	Intergenic	-25874	NM_172821	71751	Mm.420837	NM_172821	ENSMUSG00000033618	Map3k13	C130026N12Rik|LZK	mitogen-activated protein kinase kinase kinase 13	protein-coding
unique_peak1-1097-32-10-1.81966040058236-4.28341153583535	chr11	88908634	88910164	+	0	NA	intron (NM_019505, intron 7 of 10)	RLTR18B|LTR|ERVK	12663	NM_019505	56077	Mm.153695	NM_019505	ENSMUSG00000000276	Dgke	C87606|DAGK6|DGK	diacylglycerol kinase, epsilon	protein-coding
common_peak2-24766-5-5--0.289342836727009-0.909929411522249	chr17	56290642	56291163	+	0	NA	Intergenic	MTD|LTR|MaLR	-11012	NM_025566	66443	Mm.2312	NM_025566	ENSMUSG00000044469	Tnfaip8l1	2600017J23Rik	tumor necrosis factor, alpha-induced protein 8-like 1	protein-coding
unique_peak2-39639-4-5--0.608423014574403-0.909929411522249	chr9	103201401	103201793	+	0	NA	Intergenic	Intergenic	-6060	NM_176979	235559	Mm.259893	NM_176979	ENSMUSG00000032555	Topbp1	1110031N14Rik|2810429C13Rik|AI256758|D430026L04Rik|mKIAA0259	topoisomerase (DNA) II binding protein 1	protein-coding
common_peak1-12540-89-95-0.450004254104846-1.5515840017567	chr18	5333559	5334988	+	0	NA	intron (NM_178722, intron 1 of 4)	CpG	164	NM_178722	240186	Mm.118257	NM_178722	ENSMUSG00000050945	Zfp438	9430031G09|9430091M14Rik|B830013J05Rik	zinc finger protein 438	protein-coding
common_peak1-15175-46-89--0.593857153080873-1.53453097058419	chr3	152265189	152266504	+	0	NA	intron (NM_001081277, intron 6 of 13)	intron (NM_001081277, intron 6 of 13)	-64031	NR_040386	99542	Mm.394921	NR_040386	ENSMUSG00000097745	AI115009	-	expressed sequence AI115009	ncRNA
unique_peak2-36218-3-5--0.998945590680433-0.96108193396963	chr2	35333117	35333481	+	0	NA	Intergenic	Intergenic	-16354	NM_001145821	14594	Mm.281124	NM_010283	ENSMUSG00000035778	Ggta1	AW108479|GALT|Gal|Ggta|Ggta-1|alpha3GalT	glycoprotein galactosyltransferase alpha 1, 3	protein-coding
common_peak1-10863-30-38--0.115726809370376-0.312769113767451	chr15	10485183	10486479	+	0	NA	intron (NM_029430, intron 1 of 10)	B3|SINE|B2	2592	NM_029430	75777	Mm.48812	NM_029430	ENSMUSG00000022249	Ttc23l	4930401A09Rik	tetratricopeptide repeat domain 23-like	protein-coding
common_peak2-20455-8-15--0.994777582052429-0.771068449301683	chr10	41450374	41450886	+	0	NA	intron (NM_001243074, intron 6 of 10)	intron (NM_001243074, intron 6 of 10)	78839	NM_001243075	103268	Mm.338605	NM_026643	ENSMUSG00000019813	Cep57l1	2410017P07Rik|4930484D11Rik|AI607327|cep57R	centrosomal protein 57-like 1	protein-coding
common_peak2-21304-18-26--0.441968350935117-0.471456499375593	chr11	73176327	73177091	+	0	NA	Intergenic	L1Md_A|LINE|L1	-8039	NM_001172686	258924	Mm.236410	NM_146922	ENSMUSG00000063881	Olfr376	MOR135-12	olfactory receptor 376	protein-coding
unique_peak1-1556-8-2-1.42025991722641-1.65811743852845	chr13	28257559	28258102	+	0	NA	Intergenic	Intergenic	23477	NM_023746	28078	Mm.155058	NM_023746	ENSMUSG00000017064	Prl5a1	1600013P04Rik|D13Wsu14e|PLP-L|Prlpl	prolactin family 5, subfamily a, member 1	protein-coding
common_peak2-29911-12-20--0.743541437691122-0.625923329873571	chr6	114988122	114988903	+	0	NA	promoter-TSS (NM_026894)	promoter-TSS (NM_026894)	-620	NM_026894	68971	Mm.24937	NM_026894	ENSMUSG00000030316	Tamm41	1500001M20Rik|TAM41	TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)	protein-coding
unique_peak2-33048-6-11--1.01956439034085-1.32595962126035	chr10	75547799	75548415	+	0	NA	intron (NM_023219, intron 7 of 14)	MTB_Mm|LTR|MaLR	25656	NM_023219	64454	Mm.155678	NM_023219		Slc5a4b	2010104G07Rik|SAAT1|SGLT3-b|SGLT3b|pSGLT2	solute carrier family 5 (neutral amino acid transporters, system A), member 4b	protein-coding
common_peak2-27453-29-58--0.770352968746731-1.54911055580826	chr3	90292313	90293926	+	0	NA	TTS (NM_026374)	TTS (NM_026374)	1816	NM_133854	20615	Mm.331182	NM_133854	ENSMUSG00000001018	Snapin	25kDa|AA407989|AV026596|Bloc1s7|Snap25bp|Snapap	SNAP-associated protein	protein-coding
common_peak2-23702-24-39--0.528718192119646-0.694972475810969	chr15	88866985	88868716	+	0	NA	intron (NM_031260, intron 22 of 26)	IAPEz-int|LTR|ERVK	-22306	NM_001002005	406218	Mm.483059	NM_001002005	ENSMUSG00000058441	Panx2	-	pannexin 2	protein-coding
common_peak1-18653-8-11--0.579740082773585-1.14218153353838	chr8	111746823	111747397	+	0	NA	Intergenic	L1M2|LINE|L1	117698	NR_002928	384864	Mm.390083	NR_002928		Gm1943	-	WD repeat domain 70 pseudogene	pseudo
common_peak2-25319-24-9-1.47128180788035-2.52428350728854	chr18	75446717	75447345	+	0	NA	TTS (NM_027727)	TTS (NM_027727)	9940	NR_045394	100503117	Mm.250517	NR_045393		2010010A06Rik	5033420E22Rik	RIKEN cDNA 2010010A06 gene	ncRNA
common_peak1-8815-9-25--1.51082631173687-2.00244947055753	chr11	22286453	22286968	+	0	NA	Intergenic	Intergenic	-99912	NM_001252515	216565	Mm.491265	NM_153078	ENSMUSG00000042302	Ehbp1	AF424697|Flj21950|NACSIN	EH domain binding protein 1	protein-coding
common_peak2-30250-76-142--0.397926950915108-1.24588799350468	chr7	7298106	7300267	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-8982	NM_009490	22306	Mm.458977	NM_009490	ENSMUSG00000070847	Vmn2r30	ENSMUSG00000070847|V2r15	vomeronasal 2, receptor 30	protein-coding
unique_peak1-4823-7-10--0.660340788339108-1.12966497611638	chr3	144765776	144766186	+	0	NA	Intergenic	Intergenic	-3976	NM_178697	229933	Mm.331420	NM_178697	ENSMUSG00000036960	Clca5	4732440A06|AI586120|Clca2	chloride channel calcium activated 5	protein-coding
common_peak2-20302-23-14-0.814876908900562-1.09492971584134	chr1	194976129	194976776	+	0	NA	Intergenic	URR1A|DNA|MER1_type	-2854	NM_016851	54139	Mm.273695	NM_016851	ENSMUSG00000026638	Irf6	AI876454|E230028I05Rik|mirf6	interferon regulatory factor 6	protein-coding
common_peak2-27224-63-158--0.874570364213766-4.83368298064739	chr3	51415357	51417012	+	0	NA	Intergenic	Intergenic	-48931	NM_174995	211666	Mm.24679	NM_174995	ENSMUSG00000074604	Mgst2	GST2|MGST-II	microsomal glutathione S-transferase 2	protein-coding
common_peak2-22211-16-17--0.0516613591742505-0.301029995663984	chr12	111966419	111967103	+	0	NA	Intergenic	GA-rich|Low_complexity|Low_complexity	-9398	NM_027149	69641	Mm.491226	NM_027149	ENSMUSG00000037957	Wdr20	2310040A13Rik|AI549910|Wdr20a	WD repeat domain 20	protein-coding
unique_peak2-39325-11-18--0.739233929191972-0.671582559449692	chr8	126666795	126667635	+	0	NA	Intergenic	Intergenic	-88079	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
common_peak1-10865-18-28--0.54506184389922-0.591915184368642	chr15	12320442	12321198	+	0	NA	intron (NM_001081064, intron 13 of 23)	L1_Mus1|LINE|L1	69569	NM_025673	66629	Mm.157655	NM_025673	ENSMUSG00000022200	Golph3	4733401N08Rik|5730410D03Rik|AW413496	golgi phosphoprotein 3	protein-coding
unique_peak1-5700-22-8-1.47735910364509-2.29727994934156	chr6	34869504	34870288	+	0	NA	Intergenic	Intergenic	-1064	NM_009292	20899	Mm.5171	NM_009292	ENSMUSG00000029848	Stra8	-	stimulated by retinoic acid gene 8	protein-coding
unique_peak1-4916-7-2-1.21412832957703-1.45399745587252	chr4	55169725	55170132	+	0	NA	Intergenic	Intergenic	-192986	NM_009011	19359	Mm.196846	NM_009011	ENSMUSG00000028426	Rad23b	0610007D13Rik|AV001138|HR23B|mHR23B|p58	RAD23b homolog (S. cerevisiae)	protein-coding
common_peak1-18589-25-13-1.0544949832875-1.65862513589797	chr8	106401008	106402001	+	0	NA	Intergenic	Intergenic	-224021	NM_009868	12562	Mm.21767	NM_009868	ENSMUSG00000031871	Cdh5	7B4|AA408225|Cd144|VE-Cad|VECD|VEcad|Vec	cadherin 5	protein-coding
unique_peak2-35615-3-5--0.998945590680433-0.96108193396963	chr17	84148983	84149262	+	0	NA	intron (NM_001171053, intron 4 of 13)	Lx8|LINE|L1	43619	NM_001171052	116871	Mm.277668	NM_054082	ENSMUSG00000055817	Mta3	1110002J22Rik|mKIAA1266	metastasis associated 3	protein-coding
unique_peak2-33167-4-11--1.6084230145744-1.68134727924692	chr10	94560966	94561592	+	0	NA	Intergenic	Intergenic	-154067	NM_018797	54712	Mm.256712	NM_018797	ENSMUSG00000074785	Plxnc1	2510048K12Rik|AW742158|CD232|Vespr	plexin C1	protein-coding
unique_peak2-33111-11-25--1.19174613388948-1.51503956548638	chr10	81137588	81138500	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	26230	NM_001142963	100233208	Mm.327168	NM_001142963		Gm10778	ENSMUSG00000074860	predicted gene 10778	protein-coding
common_peak2-20258-9-11--0.395349094316936-0.344532117358383	chr1	186582087	186582639	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-25991	NM_008250	15284	Mm.1347	NM_008250	ENSMUSG00000039377	Hlx	Hlx1	H2.0-like homeobox	protein-coding
common_peak1-16484-24-21-0.333778284130419-0.518921928796332	chr5	137785490	137786832	+	0	NA	Intergenic	B3|SINE|B2	-5176	NM_001159571	13846	Mm.34533	NM_010144	ENSMUSG00000029710	Ephb4	AI042935|Htk|MDK2|Myk1|Tyro11	Eph receptor B4	protein-coding
unique_peak2-39348-9-29--1.7172771892043-2.70611768348013	chr9	61913781	61915181	+	0	NA	intron (NM_033320, intron 2 of 2)	intron (NM_033320, intron 2 of 2)	3932	NM_033320	93683	Mm.24411	NM_033320	ENSMUSG00000032252	Glce	1110017N23Rik|AI747411|C130034A12Rik|Hsepi	glucuronyl C5-epimerase	protein-coding
common_peak1-11544-7-8--0.370834171144123-1.00793137938329	chr16	5203555	5204077	+	0	NA	exon (NM_013796, exon 2 of 10)	exon (NM_013796, exon 2 of 10)	289	NM_013796	27426	Mm.215641	NM_013796	ENSMUSG00000023143	Nagpa	AI596180|UCE	N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase	protein-coding
common_peak1-8374-20-45--1.03548717146582-2.05089002217436	chr10	60933659	60934483	+	0	NA	Intergenic	Intergenic	-4510	NM_153542	216011	Mm.136116	NM_153542	ENSMUSG00000037151	Lrrc20	BC036304	leucine rich repeat containing 20	protein-coding
common_peak2-26313-12-15--0.351224014912361-0.332077462497413	chr2	32713215	32713870	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-10785	NM_001113569	20910	Mm.278865	NM_009295	ENSMUSG00000026797	Stxbp1	AI317162|AI326233|MMS10-G|Ms10g|Munc-18a|Munc18-1|N-sec1|Rb-sec1|Sxtbp1|Unc18-1|Unc18h|nsec1	syntaxin binding protein 1	protein-coding
unique_peak2-36477-4-5--0.608423014574403-0.909929411522249	chr2	150310953	150311341	+	0	NA	promoter-TSS (NM_001034900)	promoter-TSS (NM_001034900)	-348	NM_001034900	545471	Mm.451002	NM_001034900	ENSMUSG00000074731	Zfp345	OTTMUSG00000015743	zinc finger protein 345	protein-coding
common_peak1-7473-19-31--0.597312673338314-0.721233599456203	chr1	171113773	171114623	+	0	NA	Intergenic	MER63B|DNA|AcHobo	347397	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
unique_peak1-1989-12-6-0.841421063030034-1.58711810488664	chr15	41615323	41615892	+	0	NA	intron (NM_001130166, intron 3 of 16)	B4|SINE|B4	-4973	NM_001130165	170719	Mm.254267	NM_130885	ENSMUSG00000022307	Oxr1	2210416C20Rik|C7|C7B	oxidation resistance 1	protein-coding
common_peak2-19608-11-5-0.923731083530457-1.477227296591	chr1	34432880	34433167	+	0	NA	Intergenic	Intergenic	57021	NR_039562	100628580		NR_039562	miRBase:MI0018011	Mir5103	mmu-mir-5103|mu-mir-5103	microRNA 5103	ncRNA
common_peak2-28246-6-7--0.434601889619698-0.97990265578305	chr4	123803918	123804333	+	0	NA	Intergenic	Intergenic	209449	NM_017475	54170	Mm.220922	NM_017475	ENSMUSG00000028646	Rragc	AU041672|Gtr2|RAGC|TIB929|YGR163W	Ras-related GTP binding C	protein-coding
unique_peak1-6918-12-6-0.841421063030034-1.58711810488664	chr8	106404776	106405448	+	0	NA	Intergenic	Intergenic	-220413	NM_009868	12562	Mm.21767	NM_009868	ENSMUSG00000031871	Cdh5	7B4|AA408225|Cd144|VE-Cad|VECD|VEcad|Vec	cadherin 5	protein-coding
unique_peak1-653-10-0-3.35641534500877-3.31132995230379	chr10	59432288	59432852	+	0	NA	Intergenic	Intergenic	-18052	NM_029083	74747	Mm.21697	NM_029083	ENSMUSG00000020108	Ddit4	5830413E08Rik|AA415483|REDD1|Rtp801|dig2	DNA-damage-inducible transcript 4	protein-coding
common_peak1-16025-18-10-0.853487532591054-1.03889213727317	chr5	36072289	36073086	+	0	NA	promoter-TSS (NM_194344)	promoter-TSS (NM_194344)	-762	NM_194344	231147	Mm.290429	NM_194344	ENSMUSG00000036553	Sh3tc1	4631428G15|BC024909	SH3 domain and tetratricopeptide repeats 1	protein-coding
common_peak2-20582-20-35--0.681850216851119-0.950553505527076	chr10	77606111	77606740	+	0	NA	Intergenic	Lx9|LINE|L1	26088	NM_138601	28295	Mm.268691	NM_138601	ENSMUSG00000053329	D10Jhu81e	C21orf33|ES1	DNA segment, Chr 10, Johns Hopkins University 81 expressed	protein-coding
common_peak1-13128-66-52-0.790563209862643-2.74580449436195	chr19	9072798	9074997	+	0	NA	intron (NR_104460, intron 1 of 6)	MIRc|SINE|MIR	10123	NM_001286518	66395	Mm.203866	NM_009643	ENSMUSG00000069833	Ahnak	DY6	AHNAK nucleoprotein (desmoyokin)	protein-coding
common_peak1-16290-12-9-0.326847890200276-0.459837087125828	chr5	112280174	112280724	+	0	NA	Intergenic	Intergenic	-89701	NR_045833	269683	Mm.136946	NM_207252	ENSMUSG00000085271	E130006D01Rik	Gm16018|Gm681|OTTMUSG00000029083	RIKEN cDNA E130006D01 gene	ncRNA
common_peak2-24028-10-10--0.103016273628528-0.301029995663987	chr16	23166295	23166832	+	0	NA	Intergenic	Intergenic	19954	NM_009605	11450	Mm.3969	NM_009605	ENSMUSG00000022878	Adipoq	30kDa|APN|Acdc|Acrp30|GBP28|adipo|apM1	adiponectin, C1Q and collagen domain containing	protein-coding
common_peak1-9723-19-23--0.18227517405947-0.320777457303847	chr12	32819337	32820043	+	0	NA	Intergenic	Intergenic	73513	NM_001146201	30955	Mm.101369	NM_020272	ENSMUSG00000020573	Pik3cg	5830428L06Rik|PI3Kgamma|p110gamma	phosphoinositide-3-kinase, catalytic, gamma polypeptide	protein-coding
common_peak2-23358-32-62--0.698187904280257-1.44840522860438	chr15	44427269	44428608	+	0	NA	intron (NM_138674, intron 76 of 76)	intron (NM_138674, intron 76 of 76)	-23249	NM_019480	55960	Mm.287896	NM_019480	ENSMUSG00000022339	Ebag9	AI835379|Rcas1	estrogen receptor-binding fragment-associated gene 9	protein-coding
common_peak2-31190-10-5-0.771452844287613-1.33892459842472	chr8	56232448	56232846	+	0	NA	Intergenic	Intergenic	192566	NM_001253756	234267	Mm.241700	NM_153581	ENSMUSG00000031517	Gpm6a	Gpm6|M6A	glycoprotein m6a	protein-coding
common_peak2-22615-16-19--0.203664452619301-0.325169893479371	chr13	75797312	75797905	+	0	NA	Intergenic	ID2|SINE|ID	15114	NR_030451	751556		NR_030451	miRBase:MI0004644	Mir682	Mirn682|mir-682|mmu-mir-682	microRNA 682	ncRNA
common_peak1-11464-12-9-0.326847890200276-0.459837087125828	chr15	101772241	101772838	+	0	NA	Intergenic	Intergenic	-1784	NM_146063	223917	Mm.162744	NM_146063	ENSMUSG00000061397	Krt79	BC031593	keratin 79	protein-coding
common_peak2-24881-37-55--0.281361850571785-0.475408985215012	chr17	83513696	83514963	+	0	NA	Intergenic	CT-rich|Low_complexity|Low_complexity	-36764	NR_045094	100503434	Mm.187281	NR_045094		Gm19689	-	predicted gene, 19689	ncRNA
unique_peak2-39941-10-8-0.186490343566457-1.078512453669	chrX	126758360	126758826	+	0	NA	intron (NM_172493, intron 23 of 26)	intron (NM_172493, intron 23 of 26)	474315	NM_172493	54004	Mm.10763	NM_017398	ENSMUSG00000034480	Diap2	Dia3|Diaph2|Drf2|E430022I22Rik	diaphanous homolog 2 (Drosophila)	protein-coding
common_peak2-28750-26-13-1.12054417010086-1.80107744087171	chr5	39716272	39716858	+	0	NA	Intergenic	Intergenic	278248	NR_045416	75095	Mm.332354	NR_045416		4930513D17Rik	-	RIKEN cDNA 4930513D17 gene	ncRNA
common_peak1-10237-15-20--0.380152672223105-0.397739447719386	chr13	52978109	52978822	+	0	NA	intron (NM_016709, intron 6 of 9)	intron (NM_016709, intron 6 of 9)	46581	NM_016709	11992	Mm.252034	NM_016709	ENSMUSG00000021460	Auh	C77140|W91705	AU RNA binding protein/enoyl-coenzyme A hydratase	protein-coding
common_peak2-28977-41-48-0.0864388607334519-0.335782825099843	chr5	104570956	104572387	+	0	NA	Intergenic	Intergenic	-28060	NM_010080	666279	Mm.319832	NM_010080	ENSMUSG00000053268	Dspp	Dmp2|Dmp3|Dpp|Dsp	dentin sialophosphoprotein	protein-coding
common_peak1-15807-51-27-1.26756890354497-4.11766476295455	chr5	24820576	24822226	+	0	NA	exon (NM_001081383, exon 36 of 59)	exon (NM_001081383, exon 36 of 59)	92690	NM_144908	231050	Mm.246718	NM_144908	ENSMUSG00000038072	Galnt11	A430075I06Rik|AI648252|E430002F06Rik	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11	protein-coding
common_peak2-32237-9-11--0.395349094316936-0.344532117358383	chr9	124312361	124312847	+	0	NA	Intergenic	Intergenic	276322	NM_009917	12774	Mm.14302	NM_009917	ENSMUSG00000079227	Ccr5	AM4-7|CD195|Cmkbr5	chemokine (C-C motif) receptor 5	protein-coding
unique_peak2-37226-5-14--1.61127093161437-1.95509489018123	chr4	88787935	88788465	+	0	NA	intron (NM_024433, intron 1 of 7)	intron (NM_024433, intron 1 of 7)	4926	NM_024433	66902	Mm.28500	NM_024433	ENSMUSG00000062937	Mtap	1300019I21Rik|MSAP	methylthioadenosine phosphorylase	protein-coding
common_peak1-9944-23-12-1.02132778636799-1.44787515926925	chr12	110601364	110602287	+	0	NA	Intergenic	MYSERV16_I-int|LTR|ERVK	-89208	NR_033813	13386	Mm.157069	NM_010052	ENSMUSG00000040856	Dlk1	AW742678|DLK-1|DlkI|FA1|Ly107|Peg9|SCP1|ZOG|pG2|pref-1	delta-like 1 homolog (Drosophila)	protein-coding
common_peak1-9132-22-14-0.740393509478886-0.983972868822056	chr11	75551723	75552570	+	0	NA	intron (NM_009536, intron 1 of 5)	intron (NM_009536, intron 1 of 5)	5757	NM_009536	22627	Mm.234700	NM_009536	ENSMUSG00000020849	Ywhae	AU019196	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide	protein-coding
unique_peak1-181-8-3-1.00522241794757-1.39487600375387	chr1	74505310	74505831	+	0	NA	intron (NM_176972, intron 18 of 25)	intron (NM_176972, intron 18 of 25)	-47064	NM_021383	58184	Mm.291708	NM_021383	ENSMUSG00000026174	Rqcd1	2610007F23Rik|AI593551|Fl10	rcd1 (required for cell differentiation) homolog 1 (S. pombe)	protein-coding
common_peak1-8794-14-8-0.729291158915332-0.771068449301682	chr11	17952748	17953343	+	0	NA	Intergenic	Intergenic	-99167	NM_026576	68145	Mm.178684	NM_026576	ENSMUSG00000016984	Etaa1	5730466H23Rik|AA672646	Ewing tumor-associated antigen 1	protein-coding
common_peak1-16565-13-10-0.319040412000471-0.446472590016315	chr5	146250754	146251519	+	0	NA	Intergenic	Intergenic	-20544	NM_007820	13114	Mm.378905	NM_007820	ENSMUSG00000038656	Cyp3a16	-	cytochrome P450, family 3, subfamily a, polypeptide 16	protein-coding
unique_peak2-32740-8-6-0.197867495889966-1.03789460276074	chr1	165459364	165459786	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-125803	NM_178883	98376	Mm.32901	NM_178883	ENSMUSG00000040124	Gorab	AI467484|NTKL-BP1|Scyl1bp1	golgin, RAB6-interacting	protein-coding
common_peak1-18640-27-48--0.623163893219973-1.00060938969219	chr8	111258326	111259436	+	0	NA	intron (NM_007496, intron 1 of 9)	intron (NM_007496, intron 1 of 9)	20337	NM_007496	11906	Mm.416972	NM_007496	ENSMUSG00000038872	Zfhx3	A230102L03Rik|Atbf1|WBP9|mKIAA4228	zinc finger homeobox 3	protein-coding
common_peak2-31828-20-31--0.511925215408807-0.634510163964152	chr9	44361132	44361874	+	0	NA	Intergenic	GA-rich|Low_complexity|Low_complexity	-26999	NM_007551	12145	Mm.6246	NM_007551	ENSMUSG00000047880	Cxcr5	Blr1|CXC-R5|CXCR-5|Gpcr6|MDR15	chemokine (C-X-C motif) receptor 5	protein-coding
unique_peak2-33468-4-9--1.34538860874061-1.36011389749466	chr11	69098491	69098909	+	0	NA	Intergenic	B2_Mm2|SINE|B2	38675	NM_172560	216846	Mm.28774	NM_172560	ENSMUSG00000032782	Cntrob	9830165K03Rik|Lip8	centrobin, centrosomal BRCA2 interacting protein	protein-coding
common_peak1-12221-23-23-0.136805003787924-0.340939137447793	chr17	34898528	34899521	+	0	NA	Intergenic	ETnERV2-int|LTR|ERVK	-18182	NM_009780	12268	Mm.477109	NM_009780	ENSMUSG00000073418	C4b	C4|Ss	complement component 4B (Chido blood group)	protein-coding
unique_peak2-35090-2-5--1.50241675698448-1.08602067057793	chr16	18343189	18343587	+	0	NA	intron (NM_138583, intron 1 of 8)	intron (NM_138583, intron 1 of 8)	637	NM_138583	27883	Mm.265990	NM_138583	ENSMUSG00000013539	Tango2	D16H22S680E|T10	transport and golgi organization 2	protein-coding
common_peak2-29933-29-36--0.0971632850138393-0.304088508634286	chr6	115538552	115539762	+	0	NA	intron (NM_001101431, intron 2 of 3)	intron (NM_001101431, intron 2 of 3)	3437	NM_001101431	70291	Mm.133694	NM_001101431		Mkrn2os	2510049J12Rik	makorin, ring finger protein 2, opposite strand	protein-coding
common_peak1-13544-6-4-0.24347001549294-0.989110657569874	chr2	3715736	3716185	+	0	NA	Intergenic	RLTR13D1|LTR|ERVK	85230	NM_025626	66540	Mm.277864	NM_025626	ENSMUSG00000026655	Fam107b	3110001A13Rik|AA589595|AA959793|AI132312	family with sequence similarity 107, member B	protein-coding
common_peak2-28842-15-13-0.204809828498052-0.368541233333383	chr5	69591785	69592305	+	0	NA	intron (NM_175519, intron 1 of 1)	Lx5|LINE|L1	140903	NM_175519	243043	Mm.234821	NM_175519	ENSMUSG00000037653	Kctd8	A730087N02Rik	potassium channel tetramerisation domain containing 8	protein-coding
common_peak2-20411-13-38--1.50693018822448-2.79998507211557	chr10	25359731	25360656	+	0	NA	Intergenic	Intergenic	-104115	NM_001195596	100504474	Mm.46323	NM_001195596	ENSMUSG00000096546	Smlr1	2010003K15Rik	small leucine-rich protein 1	protein-coding
unique_peak1-2131-13-2-2.19350952991661-3.03832868024006	chr15	54363007	54363706	+	0	NA	Intergenic	Intergenic	-39565	NM_178920	105853	Mm.410994	NM_178920	ENSMUSG00000024479	Mal2	AI461653	mal, T cell differentiation protein 2	protein-coding
unique_peak2-39077-3-5--0.998945590680433-0.96108193396963	chr8	73137428	73137708	+	0	NA	Intergenic	Intergenic	-3175	NM_153074	211228	Mm.132939	NM_153074	ENSMUSG00000049988	Lrrc25	Mapa	leucine rich repeat containing 25	protein-coding
unique_peak2-35816-10-20--1.03590207776999-1.03889213727317	chr18	64045452	64046374	+	0	NA	intron (NM_001014981, intron 21 of 27)	intron (NM_001014981, intron 21 of 27)	177564	NM_001014981	104082	Mm.30850	NM_001014981	ENSMUSG00000040560	Wdr7	AI462727|TRAG|mKIAA0541	WD repeat domain 7	protein-coding
common_peak2-26367-19-15-0.402687326661686-0.519193887192487	chr2	38925805	38926399	+	0	NA	3' UTR (NM_178778, exon 18 of 18)	3' UTR (NM_178778, exon 18 of 18)	-5041	NM_029793	76899	Mm.131098	NM_029793	ENSMUSG00000026754	Golga1	0710001G09Rik|2210418B03Rik|AW107649|Golgi97|golgin-97	golgi autoantigen, golgin subfamily a, 1	protein-coding
unique_peak1-2839-9-7-0.18961340640422-1.05908390183068	chr17	28517802	28518277	+	0	NA	Intergenic	Intergenic	-15951	NM_021478	22157	Mm.42102	NM_021478	ENSMUSG00000037446	Tulp1	Tulp1l	tubby like protein 1	protein-coding
common_peak2-24944-11-7-0.508693584251613-1.21681515183528	chr18	35192496	35192850	+	0	NA	Intergenic	B3|SINE|B2	-78668	NM_010481	15526	Mm.209419	NM_010481	ENSMUSG00000024359	Hspa9	74kDa|Csa|Grp75|Hsc74|Hsp74|Hsp74a|Hspa9a|Mortalin|Mot-2|Mot2|Mthsp70|Pbp74	heat shock protein 9	protein-coding
unique_peak2-39115-9-20--1.20270401637454-1.23014042908325	chr8	82863163	82864220	+	0	NA	Intergenic	Intergenic	-154253	NM_010369	14934	Mm.13123	NM_010369	ENSMUSG00000051839	Gypa	AI853584|CD235a|GPA	glycophorin A	protein-coding
unique_peak1-4646-9-2-1.60465090568306-1.87199725847353	chr3	88532455	88532967	+	0	NA	intron (NR_028056, intron 5 of 5)	ID_B1|SINE|B4	11935	NM_001163310	19769	Mm.4009	NM_009069		Rit1	RIBB|ROC1|Rit	Ras-like without CAAX 1	protein-coding
common_peak2-23594-56-55-0.428240903381639-0.97183630865368	chr15	80173249	80174501	+	0	NA	intron (NM_001044308, intron 5 of 36)	intron (NM_001044308, intron 5 of 36)	56207	NM_001044308	239556	Mm.291058	NM_001044308	ENSMUSG00000022416	Cacna1i	Ca(V)3.3	calcium channel, voltage-dependent, alpha 1I subunit	protein-coding
common_peak1-8968-13-10-0.319040412000471-0.446472590016315	chr11	58103023	58103749	+	0	NA	Intergenic	Intergenic	-17185	NM_182996	103836	Mm.41440	NM_182996	ENSMUSG00000037243	Zfp692	AI746306|AI839920|Zfp692-ps|Znf692	zinc finger protein 692	protein-coding
unique_peak1-4673-11-0-3.50869358425161-3.61235994796777	chr3	94412324	94412874	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	-25961	NM_029721	76742	Mm.28160	NM_029721	ENSMUSG00000028136	Snx27	5730552M22Rik|ESTM45|ESTM47|R75405	sorting nexin family member 27	protein-coding
common_peak1-15791-33-25-0.630897844384437-1.05951140195658	chr4	155650784	155652461	+	0	NA	Intergenic	Intergenic	-42656	NM_198305	231003	Mm.423038	NM_198305	ENSMUSG00000078484	Klhl17	AL022703|BC058738	kelch-like 17	protein-coding
common_peak2-24852-19-20-0.0103699038829257-0.306326795069978	chr17	75276914	75278109	+	0	NA	Intergenic	Lx7|LINE|L1	-127358	NM_019919	268977	Mm.269747	NM_019919	ENSMUSG00000001870	Ltbp1	9430031G15Rik|9830146M04|Ltbp-1|Tgfb|b2b1000Clo	latent transforming growth factor beta binding protein 1	protein-coding
common_peak1-9162-8-9--0.316705676939792-1.03275496310833	chr11	77836076	77836569	+	0	NA	intron (NM_174852, intron 8 of 14)	intron (NM_174852, intron 8 of 14)	-9493	NM_183286	70451	Mm.390342	NM_183286	ENSMUSG00000020834	Dhrs13	2610209N15Rik	dehydrogenase/reductase (SDR family) member 13	protein-coding
common_peak1-11514-28-30-0.0987628094345876-0.332062764479303	chr16	38452386	38453479	+	0	NA	promoter-TSS (NM_007414)	promoter-TSS (NM_007414)	-163	NM_007414	11544	Mm.20047	NM_007414	ENSMUSG00000002844	Adprh	Arh1	ADP-ribosylarginine hydrolase	protein-coding
unique_peak1-6760-9-3-1.18961340640422-1.57096726280955	chr8	56343109	56343562	+	0	NA	Intergenic	Intergenic	303254	NM_001253756	234267	Mm.241700	NM_153581	ENSMUSG00000031517	Gpm6a	Gpm6|M6A	glycoprotein m6a	protein-coding
unique_peak1-4567-9-2-1.60465090568306-1.87199725847353	chr3	52629345	52629845	+	0	NA	Intergenic	Intergenic	85949	NR_038079	329639	Mm.131245	NR_038079		Gm2447	100039832|A530017F20	predicted gene 2447	ncRNA
common_peak2-31528-60-57-0.496310866492959-1.28274482643493	chr8	109957283	109959102	+	0	NA	Intergenic	RLTR14-int|LTR|ERV1	-2106	NM_025830	66894	Mm.390058	NM_025830	ENSMUSG00000031930	Wwp2	1300010O06Rik|AA690238|AIP2|AW554328	WW domain containing E3 ubiquitin protein ligase 2	protein-coding
unique_peak2-34239-1-5--2.2120195109379-1.32905871926422	chr13	53309915	53310330	+	0	NA	intron (NM_013846, intron 1 of 8)	intron (NM_013846, intron 1 of 8)	71356	NM_013846	26564	Mm.342774	NM_013846	ENSMUSG00000021464	Ror2	Ntrkr2|mRor2	receptor tyrosine kinase-like orphan receptor 2	protein-coding
common_peak2-21909-5-7--0.704380336005853-1.01466476204226	chr12	8864525	8864946	+	0	NA	Intergenic	(CAGG)n|Simple_repeat|Simple_repeat	-63378	NM_008640	17775	Mm.30071	NM_008640	ENSMUSG00000020585	Laptm4a	AA286466|LAPTM4|MTP|Mtrp|mKIAA0108	lysosomal-associated protein transmembrane 4A	protein-coding
unique_peak1-5847-20-2-2.90311228387004-4.53603905993749	chr6	82863200	82864024	+	0	NA	exon (NM_011350, exon 14 of 14)	exon (NM_011350, exon 14 of 14)	26132	NM_011350	20355	Mm.270543	NM_011350	ENSMUSG00000000627	Sema4f	-	sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	protein-coding
common_peak2-29941-47-74--0.293977265729333-0.573287859224659	chr6	116207278	116208944	+	0	NA	intron (NM_026585, intron 28 of 30)	B3|SINE|B2	-6126	NM_001290338	67492	Mm.272772	NM_001081317	ENSMUSG00000042213	Zfand4	Anubl1	zinc finger, AN1-type domain 4	protein-coding
unique_peak2-34041-5-6--0.511735258063458-0.947717972411649	chr12	112793917	112794331	+	0	NA	Intergenic	Intergenic	14967	NR_033168	100316932	Mm.484709	NR_033168		Snora28	MBI-13	small nucleolar RNA, H/ACA box 28	snoRNA
common_peak1-7795-49-34-0.877000806080217-2.32761566727508	chr1	106406573	106408130	+	0	NA	Intergenic	L1_Mm|LINE|L1	-258045	NM_011800	23836	Mm.103640	NM_011800	ENSMUSG00000050840	Cdh20	Cdh7	cadherin 20	protein-coding
common_peak1-8045-18-17-0.142994149786039-0.353907621462753	chr1	171471036	171471753	+	0	NA	Intergenic	Intergenic	-9799	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
common_peak1-7605-177-127-1.228486329428-15.9675844858039	chr1	58651370	58653487	+	0	NA	intron (NM_025597, intron 2 of 2)	intron (NM_025597, intron 2 of 2)	8985	NM_025597	66495	Mm.2033	NM_025597		Ndufb3	2700033I16Rik|AI415450	NADH dehydrogenase (ubiquinone) 1 beta subcomplex 3	protein-coding
unique_peak1-3336-7-0-2.79909083029819-2.40823996531185	chr18	88834049	88834521	+	0	NA	Intergenic	Intergenic	229314	NM_018821	54607	Mm.91920	NM_018821	ENSMUSG00000056153	Socs6	1500012M23Rik|5830401B18Rik|AI447482|Cis4|Cish4|HSPC060|SOCS-4|SOCS-6|SSI4|STAI4|STATI4|Socs4	suppressor of cytokine signaling 6	protein-coding
common_peak2-25838-53-35-0.971048010973616-3.00951212929435	chr19	41449082	41450161	+	0	NA	intron (NM_031376, intron 2 of 16)	intron (NM_031376, intron 2 of 16)	9939	NM_031376	83490	Mm.222266	NM_031376	ENSMUSG00000025017	Pik3ap1	1810044J04Rik|BCAP	phosphoinositide-3-kinase adaptor protein 1	protein-coding
common_peak2-30937-58-71-0.126024933448185-0.393723457908232	chr8	126614242	126615929	+	0	NA	Intergenic	ORR1A1|LTR|MaLR	67712	NM_001029876	382038	Mm.334891	NM_001029876	ENSMUSG00000031976	Urb2	C77575|mKIAA0133	URB2 ribosome biogenesis 2 homolog (S. cerevisiae)	protein-coding
unique_peak2-34683-5-6--0.511735258063458-0.947717972411649	chr15	11399873	11400167	+	0	NA	Intergenic	Intergenic	-70607	NM_033074	110960	Mm.286061	NM_033074	ENSMUSG00000022241	Tars	D15Wsu59e|ThrRS	threonyl-tRNA synthetase	protein-coding
common_peak2-29316-11-16--0.578769256998726-0.503257505534083	chr5	146690884	146691587	+	0	NA	intron (NM_007818, intron 1 of 12)	intron (NM_007818, intron 1 of 12)	195	NM_007818	13112	Mm.332844	NM_007818	ENSMUSG00000056035	Cyp3a11	AI256190|Cyp3a|IIIAm1|Pcn	cytochrome P450, family 3, subfamily a, polypeptide 11	protein-coding
common_peak1-15252-42-37-0.494401814423599-0.994719720785879	chr4	12170811	12172073	+	0	NA	Intergenic	B4A|SINE|B4	-72280	NM_026558	68099	Mm.25340	NM_026558	ENSMUSG00000028218	Fam92a	6720467C03Rik|Fam92a1	family with sequence similarity 92, member A	protein-coding
common_peak1-15022-8-12--0.695217300193522-0.475924844171029	chr3	117038243	117038668	+	0	NA	exon (NM_177664, exon 2 of 7)	exon (NM_177664, exon 2 of 7)	25339	NM_177664	229791	Mm.140138	NM_177664	ENSMUSG00000044667	Lppr4	A330086D10|D3Bwg0562e|PRG-1|mKIAA0455	lipid phosphate phosphatase-related protein type 4	protein-coding
unique_peak1-5558-10-2-1.77145284428761-2.09384600808989	chr5	145222807	145223411	+	0	NA	Intergenic	RLTR33|LTR|ERVK	-83647	NM_016789	53324	Mm.10099	NM_016789	ENSMUSG00000059991	Nptx2	Narp|np2	neuronal pentraxin 2	protein-coding
common_peak2-21266-34-31-0.382068527001266-0.662333595915619	chr11	69685035	69686247	+	0	NA	Intergenic	B4|SINE|B4	5879	NM_001195710	100503361	Mm.340490	NM_001195710	ENSMUSG00000094845	Tmem95	432576	transmembrane protein 95	protein-coding
unique_peak1-2668-15-3-2.01216475055566-3.03427613622886	chr16	55555996	55556683	+	0	NA	Intergenic	Intergenic	265912	NM_001159394	80859	Mm.247272	NM_030612	ENSMUSG00000035356	Nfkbiz	AA408868|INAP|Mail	nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, zeta	protein-coding
common_peak1-17165-23-43--0.737664114128217-1.21996307277154	chr6	120037565	120038650	+	0	NA	Intergenic	IAPLTR2a|LTR|ERVK	-5291	NM_016718	29862	Mm.103668	NM_016718	ENSMUSG00000041377	Ninj2	-	ninjurin 2	protein-coding
unique_peak2-34732-5-5--0.289342836727009-0.909929411522249	chr15	38419031	38419438	+	0	NA	TTS (NR_105916)	TTS (NR_105916)	1068	NR_105916	102465574		NR_105916		Mir6951	mmu-mir-6951	microRNA mir-6951	ncRNA
common_peak2-27150-26-15-0.927899092158462-1.40782320807777	chr3	30010753	30011528	+	0	NA	Intergenic	Intergenic	-99014	NM_007963	14013	Mm.56965	NM_007963	ENSMUSG00000027684	Mecom	D630039M04Rik|Evi-1|Evi1|Jbo|Mds|Mds1|Mds1-Evi1|Prdm3|Znfpr1b1	MDS1 and EVI1 complex locus	protein-coding
common_peak2-24525-20-28--0.369906210536379-0.457753417732779	chr17	26780873	26781892	+	0	NA	intron (NM_026170, intron 9 of 9)	intron (NM_026170, intron 9 of 9)	-31959	NM_025272	11974	Mm.22602	NM_025272	ENSMUSG00000015575	Atp6v0e	Atp6k|Atp6v0e1|M9.2	ATPase, H+ transporting, lysosomal V0 subunit E	protein-coding
unique_peak1-3051-10-1-2.35641534500877-2.57096726280955	chr18	5834625	5835154	+	0	NA	Intergenic	MTEb|LTR|MaLR	-242454	NR_033552	791318	Mm.84339	NR_033552	ENSMUSG00000063087	Gm10125	ENSMUSG00000063087|Zeb1os	predicted gene 10125	ncRNA
common_peak1-11795-32-30-0.324895708832785-0.556669751231381	chr16	55966254	55967473	+	0	NA	intron (NM_024218, intron 2 of 5)	intron (NM_024218, intron 2 of 5)	475	NM_024218	68193	Mm.29221	NM_024218	ENSMUSG00000098274	Rpl24	0610008L05Rik|Bst	ribosomal protein L24	protein-coding
unique_peak1-3983-9-0-3.18961340640422-3.01029995663981	chr2	33622504	33623053	+	0	NA	intron (NM_175184, intron 7 of 9)	L1MC4|LINE|L1	-38558	NR_045729	320482	Mm.442057	NR_045729	ENSMUSG00000086484	Nron	A630071L07Rik|Gm24353	non-protein coding RNA, repressor of NFAT	ncRNA
unique_peak2-35527-2-9--2.23938235115068-1.87199725847353	chr17	51772410	51772868	+	0	NA	Intergenic	ORR1E|LTR|MaLR	178740	NM_001163630	20230	Mm.311655	NM_009122	ENSMUSG00000023927	Satb1	2610306G12Rik|AW413156	special AT-rich sequence binding protein 1	protein-coding
common_peak1-10387-17-11-0.633333837483882-0.769930178837768	chr13	95464702	95465536	+	0	NA	Intergenic	Intergenic	-93779	NM_009321	21371	Mm.379025	NM_009321	ENSMUSG00000042043	Tbca	Tbca13	tubulin cofactor A	protein-coding
common_peak2-21114-38-60--0.359284678264356-0.591158351830177	chr11	52396266	52397101	+	0	NA	Intergenic	B3A|SINE|B2	-181525	NM_177059	320027	Mm.44518	NM_177059		Fstl4	B230374F23Rik|SPIG1|mKIAA1061	follistatin-like 4	protein-coding
common_peak2-29916-22-21-0.187852486450107-0.376654945067947	chr6	115480145	115481046	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-14127	NM_199033	381802	Mm.291208	NM_199033	ENSMUSG00000042389	Tsen2	AU067695	tRNA splicing endonuclease 2 homolog (S. cerevisiae)	protein-coding
common_peak2-22371-22-31--0.352715894912595-0.440892966163086	chr13	29504875	29505669	+	0	NA	intron (NM_144536, intron 13 of 15)	intron (NM_144536, intron 13 of 15)	397148	NR_045075	77920	Mm.197051	NR_045073	ENSMUSG00000086363	A330102I10Rik	-	RIKEN cDNA A330102I10 gene	ncRNA
common_peak2-29789-17-24--0.425559851569687-0.427564438475253	chr6	89413850	89414434	+	0	NA	intron (NM_001167736, intron 4 of 6)	intron (NM_001167736, intron 4 of 6)	-101535	NM_008881	18844	Mm.3789	NM_008881	ENSMUSG00000030084	Plxna1	2600013D04Rik|NOV|PlexA1|Plxn1|mKIAA4053	plexin A1	protein-coding
common_peak2-31642-56-92--0.303562985668788-0.677463460071002	chr8	124020406	124021840	+	0	NA	Intergenic	Intergenic	44731	NM_029597	76405	Mm.165697	NM_029597	ENSMUSG00000031809	1700018B08Rik	1700084O22Rik	RIKEN cDNA 1700018B08 gene	protein-coding
common_peak1-14819-22-23-0.0623216043662485-0.319130838712456	chr3	90574407	90575267	+	0	NA	Intergenic	L1Md_F2|LINE|L1	44009	NM_207263	384997	Mm.316644	NM_207263	ENSMUSG00000042250	Pglyrp4	Gm1478|Gm413	peptidoglycan recognition protein 4	protein-coding
common_peak1-9917-33-64--0.691030250502926-1.51460024573214	chr12	98258635	98259674	+	0	NA	Intergenic	Intergenic	-973722	NR_103800	69423	Mm.46121	NM_027076	ENSMUSG00000059695	1700019M22Rik	-	NFX-like protein	pseudo
common_peak2-26805-25-36--0.347603460283844-0.465043498729215	chr2	150311418	150312110	+	0	NA	promoter-TSS (NM_001034900)	promoter-TSS (NM_001034900)	-965	NM_001034900	545471	Mm.451002	NM_001034900	ENSMUSG00000074731	Zfp345	OTTMUSG00000015743	zinc finger protein 345	protein-coding
common_peak2-30193-86-101-0.303210452060858-0.900116865408638	chr7	34388511	34390408	+	0	NA	Intergenic	Intergenic	48841	NR_045685	353109	Mm.63867	NR_045685		Scgb2b23-ps	1700028O08Rik|Abpbg23-ps|C2y|Scgb2b1|Scgb2b1-ps	secretoglobin, family 2B, member 23, pseudogene	pseudo
common_peak2-27246-14-26--0.855671341805824-0.949797625454538	chr3	52554488	52555726	+	0	NA	intron (NR_038079, intron 1 of 3)	intron (NR_038079, intron 1 of 3)	11461	NR_038079	329639	Mm.131245	NR_038079		Gm2447	100039832|A530017F20	predicted gene 2447	ncRNA
unique_peak2-39814-6-12--1.13504160776079-1.45089835786865	chrX	36329966	36330515	+	0	NA	Intergenic	Intergenic	204283	NM_183126	77883	Mm.113311	NM_183126	ENSMUSG00000051361	6030498E09Rik	-	RIKEN cDNA 6030498E09 gene	protein-coding
common_peak2-25228-22-31--0.352715894912595-0.440892966163086	chr18	62179529	62180610	+	0	NA	Intergenic	L1Md_F3|LINE|L1	67340	NM_172628	225608	Mm.262320	NM_172628	ENSMUSG00000045629	Sh3tc2	D430044G18Rik	SH3 domain and tetratricopeptide repeats 2	protein-coding
common_peak1-10985-26-29-0.0210084965499435-0.304710633611964	chr15	34442262	34443347	+	0	NA	intron (NM_026340, intron 11 of 15)	intron (NM_026340, intron 11 of 15)	17738	NM_152894	67724	Mm.248779	NM_026340	ENSMUSG00000022325	Pop1	4932434G09Rik	processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae)	protein-coding
common_peak1-9563-13-29--1.12841856497075-1.46151065785802	chr11	117823950	117824615	+	0	NA	Intergenic	Intergenic	6398	NM_007707	12702	Mm.3468	NM_007707	ENSMUSG00000053113	Socs3	Cis3|Cish3|EF-10|Ef10|SSI-3|Ssi3	suppressor of cytokine signaling 3	protein-coding
common_peak2-30776-12-19--0.673152109799724-0.546772548767014	chr7	126428331	126429067	+	0	NA	Intergenic	Intergenic	-100811	NM_001024138	209776	Mm.300632	NM_001024138	ENSMUSG00000066197	Gpr139	GPRg1|Gm495|PGR3	G protein-coupled receptor 139	protein-coding
unique_peak1-786-8-1-2.00522241794757-2.05605744720049	chr11	54820510	54820965	+	0	NA	intron (NM_001110211, intron 7 of 24)	B3A|SINE|B2	26236	NM_001110211	11749	Mm.265347	NM_013472	ENSMUSG00000018340	Anxa6	AW107198|Anx6|AnxVI|Cabm|Camb	annexin A6	protein-coding
common_peak1-15803-19-32--0.641706792696767-0.800403172662453	chr5	144965181	144966060	+	0	NA	exon (NM_027410, exon 15 of 25)	exon (NM_027410, exon 15 of 25)	14465	NM_010800	17341	Mm.386767	NM_010800	ENSMUSG00000052271	Bhlha15	1810009C13Rik|Bhlhb8|MIST-1|Mist1	basic helix-loop-helix family, member a15	protein-coding
unique_peak1-4263-16-7-1.11826364226806-1.23399803405144	chr2	131562121	131563000	+	0	NA	Intergenic	L1_Mur3|LINE|L1	110832	NR_029381	414081	Mm.246905	NR_029381	ENSMUSG00000086822	5330413P13Rik	-	RIKEN cDNA 5330413P13 gene	ncRNA
common_peak2-26445-112-119-0.526359704711764-2.4820603536011	chr2	70824834	70826016	+	0	NA	intron (NM_145524, intron 3 of 9)	intron (NM_145524, intron 3 of 9)	31006	NM_001110512	228019	Mm.490343	NM_145524	ENSMUSG00000041975	Mettl8	BC004636|Tip	methyltransferase like 8	protein-coding
unique_peak2-39410-8-8--0.164702583494742-1.00793137938329	chr9	35097870	35098487	+	0	NA	Intergenic	B4A|SINE|B4	9488	NR_040715	71133	Mm.158577	NR_040715		4933422A05Rik	-	RIKEN cDNA 4933422A05 gene	ncRNA
unique_peak2-34481-5-8--0.874305337448166-1.10484139239135	chr14	36968272	36968659	+	0	NA	Intergenic	L1_Mus3|LINE|L1	60314	NM_175008	218921	Mm.212464	NM_175008	ENSMUSG00000096405	4930474N05Rik	-	RIKEN cDNA 4930474N05 gene	protein-coding
common_peak1-18771-10-10--0.103016273628528-0.301029995663987	chr8	126848342	126848859	+	0	NA	intron (NM_139272, intron 6 of 15)	MTE2b|LTR|MaLR	93306	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
unique_peak1-4474-14-3-1.89921616035764-2.80787975886178	chr3	9666393	9667058	+	0	NA	Intergenic	Intergenic	-56640	NM_133218	170753	Mm.212908	NM_133218	ENSMUSG00000040209	Zfp704	C030026M03|C030034L19Rik|Gig1|Znf704	zinc finger protein 704	protein-coding
common_peak1-14594-25-14-0.954959309736587-1.46151065785802	chr3	51332882	51333589	+	0	NA	intron (NM_080793, intron 6 of 7)	B4|SINE|B4	-30444	NR_033624	100039684	Mm.387178	NR_033624	ENSMUSG00000097885	5031434O11Rik	AI481280|Gm2370	RIKEN cDNA 5031434O11 gene	ncRNA
unique_peak2-36083-3-4--0.73591118484664-0.864171920961574	chr19	55873562	55873974	+	0	NA	intron (NM_001142920, intron 4 of 11)	intron (NM_001142920, intron 4 of 11)	57468	NM_001142923	21416	Mm.139815	NM_009333	ENSMUSG00000024985	Tcf7l2	TCF4B|TCF4E|Tcf-4|Tcf4|mTcf-4B|mTcf-4E	transcription factor 7 like 2, T cell specific, HMG box	protein-coding
common_peak2-27886-27-26-0.236658448731768-0.436052471002789	chr4	129334677	129335393	+	0	NA	exon (NM_008468, exon 3 of 14)	exon (NM_008468, exon 3 of 14)	14976	NM_008468	16650	Mm.202358	NM_008468	ENSMUSG00000003731	Kpna6	IPOA7|Kpna5|NPI-2	karyopherin (importin) alpha 6	protein-coding
common_peak2-24453-19-29--0.504203268946832-0.580176690544129	chr17	23673353	23674560	+	0	NA	Intergenic	Intergenic	27237	NM_001033496	449521	Mm.268582	NM_001033496	ENSMUSG00000071256	Zfp213	BC038178|D17Ertd197e	zinc finger protein 213	protein-coding
common_peak1-13488-71-62-0.667164255220055-2.2547416862145	chr2	30441351	30442973	+	0	NA	Intergenic	Intergenic	-8402	NM_030137	78617	Mm.40413	NM_030137	ENSMUSG00000047363	Cstad	9530039B02Rik	CSA-conditional, T cell activation-dependent protein	protein-coding
unique_peak1-6970-6-6--0.241956811677302-0.947717972411649	chr8	118513483	118513966	+	0	NA	Intergenic	Intergenic	-282930	NM_001025577	17132	Mm.275549	NM_001025577		Maf	2810401A20Rik|A230108G15Rik|AW047063|c-maf	avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog	protein-coding
unique_peak1-4968-15-5-1.4272022498345-1.61682445937017	chr4	106862497	106863142	+	0	NA	intron (NM_029565, intron 3 of 7)	intron (NM_029565, intron 3 of 7)	11584	NM_029565	56374	Mm.291192	NM_029565	ENSMUSG00000028618	Tmem59	1110001M20Rik|3110046P06Rik|AI256529|D4Ertd20e|MTDCF1|ORF18	transmembrane protein 59	protein-coding
unique_peak1-4384-15-6-1.20480982849805-1.32521814697968	chr2	163481534	163482189	+	0	NA	Intergenic	Intergenic	-2261	NM_001277096	18769	Mm.10091	NM_011106	ENSMUSG00000035268	Pkig	PKIgamma	protein kinase inhibitor, gamma	protein-coding
common_peak2-31609-3-5--0.998945590680433-0.96108193396963	chr8	122577037	122577312	+	0	NA	TTS (NM_030209)	TTS (NM_030209)	48198	NM_133967	102193	Mm.240076	NM_133967	ENSMUSG00000031823	Zdhhc7	AL024087|Gramp2	zinc finger, DHHC domain containing 7	protein-coding
common_peak1-11109-41-61--0.253047605538215-0.456849196733789	chr15	62037453	62038732	+	0	NA	intron (NR_003368, intron 5 of 8)	intron (NR_003368, intron 5 of 8)	12914	NR_003523	67552	Mm.484027	NM_026230		H2afy3	4933432H23Rik	H2A histone family, member Y3	pseudo
common_peak2-24765-8-10--0.454209200689727-1.078512453669	chr17	56269330	56269839	+	0	NA	intron (NM_013662, intron 7 of 16)	B1_Mur3|SINE|Alu	3691	NM_013662	20359	Mm.8029	NM_013662	ENSMUSG00000001227	Sema6b	Sema|Seman|VIb|semaZ	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B	protein-coding
unique_peak1-1589-9-0-3.18961340640422-3.01029995663981	chr13	34194627	34195151	+	0	NA	intron (NR_046184, intron 2 of 4)	intron (NR_046184, intron 2 of 4)	10252	NR_046184	432745	Mm.159104	NR_046184		4930447K03Rik	-	RIKEN cDNA 4930447K03 gene	ncRNA
unique_peak1-4144-10-0-3.35641534500877-3.31132995230379	chr2	93045640	93046302	+	0	NA	intron (NM_183180, intron 8 of 9)	intron (NM_183180, intron 8 of 9)	18230	NM_001025246	277414	Mm.41033	NM_001025246	ENSMUSG00000068735	Trp53i11	Tp53i11	transformation related protein 53 inducible protein 11	protein-coding
unique_peak1-2146-11-4-1.18676548936425-1.68134727924692	chr15	58631734	58632265	+	0	NA	intron (NM_175212, intron 1 of 6)	intron (NM_175212, intron 1 of 6)	22983	NM_175212	74868	Mm.293754	NM_175212	ENSMUSG00000062373	Tmem65	2610029O13Rik|4930438D12Rik	transmembrane protein 65	protein-coding
unique_peak1-3579-16-8-0.948338640825749-1.02063122982878	chr19	29241292	29241912	+	0	NA	Intergenic	Intergenic	31833	NR_029778	724062		NR_029778		Mir101b	Mirn101b|mir-101b	microRNA 101b	ncRNA
common_peak2-23399-11-9-0.186765489364251-0.344532117358383	chr15	59077541	59077924	+	0	NA	Intergenic	Intergenic	-60771	NR_045613	100416830	Mm.490788	NR_045613	ENSMUSG00000098528	Zfp572	4930472F24Rik	zinc finger protein 572	pseudo
common_peak2-32221-22-38--0.638118113774844-0.887741995158868	chr9	122351102	122352425	+	0	NA	Intergenic	Intergenic	-43844	NR_045967	654800	Mm.393956	NR_045967		A730085K08Rik	-	RIKEN cDNA A730085K08 gene	ncRNA
unique_peak2-37934-7-28--2.05889016482938-3.23080944932561	chr5	146793960	146794939	+	0	NA	intron (NR_030782, intron 10 of 11)	intron (NR_030782, intron 10 of 11)	26744	NM_019792	56388	Mm.301900	NM_019792	ENSMUSG00000029630	Cyp3a25	AI327008	cytochrome P450, family 3, subfamily a, polypeptide 25	protein-coding
common_peak2-24657-91-123-0.119235635215463-0.422272192329521	chr17	35811814	35814597	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-2578	NM_010364	14885	Mm.10182	NM_010364	ENSMUSG00000001524	Gtf2h4	AW545633|BTF2 p52|TFIIH|p44|p52	general transcription factor II H, polypeptide 4	protein-coding
common_peak1-16055-27-23-0.40658345017408-0.622271369641148	chr5	43672110	43673069	+	0	NA	intron (NM_175937, intron 8 of 10)	intron (NM_175937, intron 8 of 10)	-45996	NR_028417	665934	Mm.381491	NR_028417		Gm7854	EG665934|ENSMUSG00000054483	predicted gene 7854	ncRNA
unique_peak2-35056-4-8--1.19338551529556-1.21878474469819	chr16	11016650	11017169	+	0	NA	Intergenic	(TTC)n|Simple_repeat|Simple_repeat	7918	NR_040518	100043147	Mm.489001	NR_040518	ENSMUSG00000097056	Gm4262	-	predicted gene 4262	ncRNA
common_peak1-10726-9-6-0.382258484346616-1.11707584880836	chr14	63132536	63133076	+	0	NA	Intergenic	Intergenic	-41768	NM_001243857	629059	Mm.291864	NM_001243857	ENSMUSG00000035184	Fam124a	EG629059	family with sequence similarity 124, member A	protein-coding
unique_peak1-3020-13-5-1.19350952991661-1.95509489018123	chr17	88508897	88509455	+	0	NA	Intergenic	Intergenic	-15676	NM_001190356	225058	Mm.312053	NM_001190356		Gm4832	EG225058	predicted gene 4832	protein-coding
common_peak2-27603-9-8-0.0196884049619079-1.03275496310833	chr3	103259727	103260197	+	0	NA	Intergenic	Lx8|LINE|L1	-119243	NM_001276679	54524	Mm.88818	NM_018800	ENSMUSG00000027849	Syt6	3110037A08Rik|AW048930|sytVI	synaptotagmin VI	protein-coding
common_peak1-11480-14-16--0.188246680892695-0.308035960714963	chr15	102051975	102052764	+	0	NA	intron (NM_013566, intron 8 of 14)	intron (NM_013566, intron 8 of 14)	9997	NM_013566	16421	Mm.58	NM_013566	ENSMUSG00000001281	Itgb7	Ly69	integrin beta 7	protein-coding
common_peak1-14255-48-68--0.137597305543355-0.342480376340174	chr2	155275981	155277139	+	0	NA	Intergenic	Intergenic	-10041	NM_019825	56406	Mm.27592	NM_019825	ENSMUSG00000038369	Ncoa6	AIB3|ASC-2|ASC2|NRC|Ncoa7|PRIP|RAP250|mKIAA0181	nuclear receptor coactivator 6	protein-coding
common_peak2-24800-37-33-0.43853023023548-0.767679714496325	chr17	66351345	66352308	+	0	NA	intron (NM_001025572, intron 8 of 12)	intron (NM_001025572, intron 8 of 12)	-51299	NM_023053	65960	Mm.10153	NM_023053	ENSMUSG00000024098	Twsg1	1810013J15Rik|9030422N06Rik|AW552143|D17Ertd403e|Tsg|Twg	twisted gastrulation homolog 1 (Drosophila)	protein-coding
common_peak2-25862-41-45-0.177586748791647-0.410818340144418	chr19	42779402	42780430	+	0	NA	Intergenic	(TATG)n|Simple_repeat|Simple_repeat	47349	NM_029011	74580	Mm.329858	NM_029011	ENSMUSG00000060224	Pyroxd2	3830409H07Rik|4833409A17Rik	pyridine nucleotide-disulphide oxidoreductase domain 2	protein-coding
common_peak2-27634-8-9--0.316705676939792-1.03275496310833	chr3	106684859	106685277	+	0	NA	Intergenic	Intergenic	-59593	NM_146489	258482	Mm.377527	NM_146489	ENSMUSG00000043529	Olfr266	MOR122-2	olfactory receptor 266	protein-coding
common_peak2-25694-16-32--0.926130477090392-1.31432283146954	chr19	16779982	16781083	+	0	NA	intron (NM_173028, intron 27 of 71)	intron (NM_173028, intron 27 of 71)	74891	NM_173028	271564	Mm.211963	NM_173028	ENSMUSG00000046230	Vps13a	4930425F11|4930516E05Rik|4930543C13Rik|9930023P20|Chac|Chorein|D330038K10Rik|mKIAA0986	vacuolar protein sorting 13A (yeast)	protein-coding
unique_peak2-35637-2-4--1.23938235115068-0.931118710592187	chr17	87975076	87975486	+	0	NA	Intergenic	Intergenic	-60038	NM_008532	17075	Mm.4259	NM_008532	ENSMUSG00000045394	Epcam	CD326|EGP|EGP-2|Egp314|Ep-CAM|EpCAM1|GA733-2|Ly74|TROP1|Tacsd1|Tacstd1|gp40	epithelial cell adhesion molecule	protein-coding
unique_peak1-1938-9-2-1.60465090568306-1.87199725847353	chr14	78528550	78529131	+	0	NA	Intergenic	Intergenic	-40026	NM_177629	219170	Mm.320428	NM_177629	ENSMUSG00000045655	Fam216b	9330158N17|AU021034	family with sequence similarity 216, member B	protein-coding
common_peak1-19296-15-11-0.4272022498345-0.503257505534083	chr9	120927051	120927705	+	0	NA	intron (NM_177589, intron 35 of 36)	intron (NM_177589, intron 35 of 36)	63174	NR_106058	102465661		NR_106058		Mir7090	mmu-mir-7090	microRNA mir-7090	ncRNA
common_peak2-22722-24-61--1.16098640761916-3.02253383160002	chr13	104228429	104229500	+	0	NA	Intergenic	Intergenic	-104392	NM_175171	328329	Mm.202606	NM_175171	ENSMUSG00000034751	Mast4	4930420O11Rik|AI642422|mKIAA0303	microtubule associated serine/threonine kinase family member 4	protein-coding
common_peak2-25068-24-29--0.113680692840802-0.304839791830752	chr18	34932114	34932879	+	0	NA	3' UTR (NM_175104, exon 5 of 5)	3' UTR (NM_175104, exon 5 of 5)	-4166	NM_001081256	277250	Mm.277906	NM_029518	ENSMUSG00000038773	Kdm3b	5830462I21Rik|JHDM2B|Jmjd1b|mKIAA1082	KDM3B lysine (K)-specific demethylase 3B	protein-coding
unique_peak1-5243-6-4-0.24347001549294-0.989110657569874	chr5	51329462	51329835	+	0	NA	Intergenic	Intergenic	615512	NR_027710	19017	Mm.259072	NM_008904	ENSMUSG00000029167	Ppargc1a	A830037N07Rik|ENSMUSG00000079510|Gm11133|PGC-1|PGC-1v|Pgc-1alpha|Pgc1|Pgco1|Ppargc1	peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	protein-coding
unique_peak1-4838-8-3-1.00522241794757-1.39487600375387	chr3	151380068	151380569	+	0	NA	Intergenic	Intergenic	32605	NM_133871	99899	Mm.30756	NM_133871	ENSMUSG00000028037	Ifi44	A430056A10Rik|AW261460|MTAP44|p44	interferon-induced protein 44	protein-coding
common_peak2-19895-10-8-0.186490343566457-1.078512453669	chr1	106170911	106171350	+	0	NA	Intergenic	L1Md_T|LINE|L1	-494266	NM_011800	23836	Mm.103640	NM_011800	ENSMUSG00000050840	Cdh20	Cdh7	cadherin 20	protein-coding
unique_peak2-37353-3-7--1.41398308995928-1.23214870625617	chr4	134237828	134238207	+	0	NA	intron (NM_207237, intron 1 of 11)	intron (NM_207237, intron 1 of 11)	22188	NM_207237	230815	Mm.18905	NM_207237	ENSMUSG00000037306	Man1c1	AI593348	mannosidase, alpha, class 1C, member 1	protein-coding
common_peak1-10713-9-13--0.617741515653384-0.459837087125828	chr14	60428736	60429237	+	0	NA	intron (NM_015803, intron 26 of 35)	intron (NM_015803, intron 26 of 35)	184868	NM_145463	219134	Mm.275409	NM_145463	ENSMUSG00000044461	Shisa2	9430059P22Rik|MAd2|Tmem46|mShisa|shisa	shisa homolog 2 (Xenopus laevis)	protein-coding
common_peak1-18584-27-11-1.40658345017408-2.62629506227042	chr8	106192048	106193258	+	0	NA	intron (NR_045730, intron 4 of 4)	intron (NR_045730, intron 4 of 4)	64954	NR_045730	71058	Mm.67707	NR_045730		4933400L20Rik	-	RIKEN cDNA 4933400L20 gene	ncRNA
common_peak2-29528-12-29--1.25811461052088-1.65862513589797	chr6	37805869	37806220	+	0	NA	Intergenic	Intergenic	-14767	NM_001272064	21848	Mm.41063	NM_145076		Trim24	A130082H20Rik|AI447469|D430004I05Rik|TIF1|TIF1-alpha|TIF1alpha|Tif1a	tripartite motif-containing 24	protein-coding
common_peak1-16194-13-10-0.319040412000471-0.446472590016315	chr5	92499309	92499852	+	0	NA	intron (NM_001080796, intron 2 of 10)	intron (NM_001080796, intron 2 of 10)	12363	NM_001080797	23881	Mm.290530	NM_011816	ENSMUSG00000029405	G3bp2	AA409541|E430034L04Rik|G3BP|mKIAA0660	GTPase activating protein (SH3 domain) binding protein 2	protein-coding
unique_peak2-36283-2-8--2.08737925770563-1.65811743852845	chr2	69135498	69135814	+	0	NA	intron (NM_021022, intron 9 of 27)	RSINE1|SINE|B4	45017	NM_021022	27413	Mm.439855	NM_021022	ENSMUSG00000027048	Abcb11	ABC16|Bsep|Lith1|PFIC2|PGY4|SPGP	ATP-binding cassette, sub-family B (MDR/TAP), member 11	protein-coding
common_peak1-8889-8-5-0.420259917226415-1.10484139239135	chr11	48973305	48973746	+	0	NA	promoter-TSS (NM_146276)	promoter-TSS (NM_146276)	7	NM_146276	258273	Mm.377407	NM_146276	ENSMUSG00000048378	Olfr1394	MOR280-1	olfactory receptor 1394	protein-coding
unique_peak1-2311-12-4-1.32684789020028-2.04196296489515	chr15	81836556	81837080	+	0	NA	intron (NM_134095, intron 1 of 5)	(CAGA)n|Simple_repeat|Simple_repeat	9752	NM_134095	28075	Mm.474453	NM_134095	ENSMUSG00000022472	Desi1	AI427858|AI850401|D15Wsu75e|DeSI-1|Fam152b|Pppde2	desumoylating isopeptidase 1	protein-coding
unique_peak2-32904-2-5--1.50241675698448-1.08602067057793	chr10	19591382	19591659	+	0	NA	intron (NM_008822, intron 8 of 9)	intron (NM_008822, intron 8 of 9)	-20255	NM_029529	76157	Mm.74324	NM_029529	ENSMUSG00000050473	Slc35d3	6230421J19Rik|Frcl1	solute carrier family 35, member D3	protein-coding
unique_peak1-6213-6-2-0.980435609659146-1.26211192963361	chr7	90128054	90128497	+	0	NA	Intergenic	ORR1A1|LTR|MaLR	-8374	NR_045855	71285	Mm.76818	NR_045855		4933430H16Rik	-	RIKEN cDNA 4933430H16 gene	ncRNA
common_peak1-8257-13-12-0.0780323124966764-0.334470287753051	chr10	20105056	20105666	+	0	NA	Intergenic	Intergenic	37736	NM_027930	71804	Mm.262151	NM_027930	ENSMUSG00000019992	Mtfr2	2610016C23Rik|4933412C16Rik|Dufd1|Fam54a	mitochondrial fission regulator 2	protein-coding
common_peak2-28445-28-38--0.232443099040786-0.377553616161376	chr4	150280875	150282387	+	0	NA	intron (NM_020569, intron 2 of 6)	intron (NM_020569, intron 2 of 6)	2399	NM_020569	57320	Mm.277349	NM_020569	ENSMUSG00000028964	Park7	DJ-1|Dj1	Parkinson disease (autosomal recessive, early onset) 7	protein-coding
unique_peak1-6968-16-2-2.53330114154691-3.78760380288747	chr8	117278587	117279420	+	0	NA	intron (NM_019573, intron 8 of 8)	RSINE1|SINE|B4	315451	NM_019573	80707	Mm.440420	NM_019573	ENSMUSG00000004637	Wwox	5330426P09Rik|9030416C10Rik|WOX1	WW domain-containing oxidoreductase	protein-coding
unique_peak2-32585-6-11--1.01956439034085-1.32595962126035	chr1	89454822	89455367	+	0	NA	intron (NM_001111314, intron 1 of 14)	ORR1D1|LTR|MaLR	15351	NM_001111314	53972	Mm.435439	NM_019867	ENSMUSG00000026259	Ngef	Tims2|ephexin	neuronal guanine nucleotide exchange factor	protein-coding
common_peak1-11141-14-11-0.314253659636488-0.435191258261915	chr15	73149921	73150731	+	0	NA	intron (NM_007982, intron 7 of 31)	intron (NM_007982, intron 7 of 31)	103295	NM_007982	14083	Mm.254494	NM_007982	ENSMUSG00000022607	Ptk2	FAK|FRNK|Fadk|mKIAA4203|p125FAK	PTK2 protein tyrosine kinase 2	protein-coding
common_peak1-11403-10-17--0.813509656433543-0.699649909729472	chr15	98634648	98635232	+	0	NA	3' UTR (NM_001013741, exon 2 of 2)	3' UTR (NM_001013741, exon 2 of 2)	3416	NM_001013741	13199	Mm.390810	NM_001013741	ENSMUSG00000059213	Ddn	Gm748	dendrin	protein-coding
unique_peak2-35770-12-19--0.673152109799724-0.546772548767014	chr18	44380446	44381219	+	0	NA	Intergenic	Intergenic	-25001	NM_001048217	433181	Mm.117440	NM_001048217	ENSMUSG00000073573	Spink11	9230112K01Rik	serine peptidase inhibitor, Kazal type 11	protein-coding
common_peak1-15292-13-15--0.221527969362231-0.308519316180257	chr4	41712818	41713482	+	0	NA	intron (NM_001163401, intron 8 of 12)	intron (NM_001163401, intron 8 of 12)	3935	NM_011336	20301	Mm.335946	NM_011336	ENSMUSG00000073888	Ccl27a	ALP|AW558992|CTACK|CTAK|Ccl27|ESkine|ILC|PESKY|Scya27|Scya27a	chemokine (C-C motif) ligand 27A	protein-coding
common_peak1-10129-65-53-0.737278437313659-2.40371295649053	chr13	32928159	32930471	+	0	NA	Intergenic	(CAAA)n|Simple_repeat|Simple_repeat	13739	NM_025429	66222	Mm.20144	NM_025429	ENSMUSG00000044734	Serpinb1a	1190005M04Rik|AI325983|EI|EIA|ELANH2|LEI|M/NEI|MNEI|PI2	serine (or cysteine) peptidase inhibitor, clade B, member 1a	protein-coding
common_peak2-29592-9-7-0.18961340640422-1.05908390183068	chr6	50407691	50408109	+	0	NA	Intergenic	Intergenic	-1731	NM_001163645	71720	Mm.44153	NM_027881	ENSMUSG00000029822	Osbpl3	1200014M06Rik|6720421I08Rik|A530055M08|ORP3|OSBP3	oxysterol binding protein-like 3	protein-coding
unique_peak2-38644-4-6--0.830815435910851-0.989110657569874	chr7	89667294	89667667	+	0	NA	intron (NM_001190374, intron 10 of 29)	intron (NM_001190374, intron 10 of 29)	129558	NM_177894	330577	Mm.222812	NM_177894	ENSMUSG00000038570	Fam154b	1700129I04Rik|D030069K18	family with sequence similarity 154, member B	protein-coding
unique_peak2-33222-2-6--1.72480917832092-1.26211192963361	chr10	120061431	120061807	+	0	NA	Intergenic	Intergenic	-141169	NR_038000	70874	Mm.427286	NR_038000	ENSMUSG00000044544	4921513I03Rik	-	RIKEN cDNA 4921513I03 gene	ncRNA
common_peak1-10513-18-10-0.853487532591054-1.03889213727317	chr14	7825718	7826416	+	0	NA	Intergenic	ORR1C2|LTR|MaLR	33896	NM_001164727	100038847	Mm.443041	NM_001164727	ENSMUSG00000093985	Gm10406	ENSMUSG00000072735	predicted gene 10406	protein-coding
common_peak2-22215-31-69--0.904044346131843-2.43183886932982	chr12	112673446	112674852	+	0	NA	Intergenic	ID_B1|SINE|B4	-6723	NM_009396	21928	Mm.255332	NM_009396	ENSMUSG00000021281	Tnfaip2	B94|Exoc3l3|M-sec|Tnfip2|tnfb94	tumor necrosis factor, alpha-induced protein 2	protein-coding
unique_peak1-287-9-0-3.18961340640422-3.01029995663981	chr1	118597294	118597897	+	0	NA	Intergenic	L1VL2|LINE|L1	1015881	NM_001077425	636808	Mm.101576	NM_001077425	ENSMUSG00000070695	Cntnap5a	Caspr5-1|EG636808	contactin associated protein-like 5A	protein-coding
common_peak2-26799-15-10-0.552733131918359-0.604422558181019	chr2	148855966	148856405	+	0	NA	Intergenic	RMER16|LTR|ERVK	-154981	NM_009976	13010	Mm.4263	NM_009976	ENSMUSG00000027447	Cst3	CysC	cystatin C	protein-coding
common_peak2-30956-6-11--1.01956439034085-1.32595962126035	chr8	83607505	83608043	+	0	NA	Intergenic	L1M5|LINE|L1	-68969	NM_027554	74841	Mm.246018	NM_027554	ENSMUSG00000038250	Usp38	4631402N15Rik|4833420O05Rik|AA536967|AU044701|AW544820|mKIAA1891	ubiquitin specific peptidase 38	protein-coding
unique_peak1-6158-9-3-1.18961340640422-1.57096726280955	chr6	137560544	137561019	+	0	NA	intron (NM_007945, intron 1 of 21)	intron (NM_007945, intron 1 of 21)	37025	NM_001271588	13860	Mm.235346	NM_007945	ENSMUSG00000015766	Eps8	AW261790	epidermal growth factor receptor pathway substrate 8	protein-coding
common_peak2-27015-26-24-0.284042902383738-0.446094173747083	chr2	173265667	173266455	+	0	NA	Intergenic	ID_B1|SINE|B4	-82032	NM_028158	72221	Mm.46132	NM_028158	ENSMUSG00000027518	1700021F07Rik	-	RIKEN cDNA 1700021F07 gene	protein-coding
unique_peak1-659-9-1-2.18961340640422-2.31132995230379	chr10	59902174	59902695	+	0	NA	intron (NR_045556, intron 14 of 68)	intron (NR_045556, intron 14 of 68)	39960	NM_001164374	100302688	Mm.444135	NM_001164374	ENSMUSG00000090439	Gm17455	-	predicted gene, 17455	protein-coding
common_peak2-29365-11-11--0.0762689164695427-0.301029995663976	chr5	151165844	151166427	+	0	NA	intron (NM_172887, intron 11 of 60)	RMER17B|LTR|ERVK	103630	NM_172887	320365	Mm.216590	NM_172887	ENSMUSG00000056602	Fry	13CDNA73|9330186A19Rik|AF346502|AI462658|C87180|D930046M03|cg003|mKIAA4143	furry homolog (Drosophila)	protein-coding
common_peak2-25518-52-52-0.3803395357025-0.821390792595417	chr19	5741331	5743169	+	0	NA	exon (NM_008520, exon 2 of 28)	exon (NM_008520, exon 2 of 28)	1346	NM_008520	16998	Mm.182396	NM_008520	ENSMUSG00000024940	Ltbp3	Ltbp2|mFLJ00070	latent transforming growth factor beta binding protein 3	protein-coding
common_peak2-31728-39-53--0.139126255244315-0.335101043913478	chr9	13322986	13324288	+	0	NA	Intergenic	B4A|SINE|B4	89056	NR_028271	18689	Mm.41972	NM_008835		Phxr4	Sp5	per-hexamer repeat gene 4	ncRNA
common_peak2-23575-14-27--0.908138761699959-1.05601013496724	chr15	79690855	79691528	+	0	NA	Intergenic	B4|SINE|B4	-26428	NM_001013362	504193	Mm.38438	NM_029079	ENSMUSG00000022421	Npcd	Cbx6-Nptxr	neuronal pentraxin chromo domain	protein-coding
common_peak1-14118-26-28-0.0699180970308904-0.316008636696532	chr2	128567810	128568760	+	0	NA	intron (NM_008587, intron 4 of 18)	intron (NM_008587, intron 4 of 18)	43552	NM_008587	17289	Mm.239655	NM_008587	ENSMUSG00000014361	Mertk	Eyk|Mer|Nyk|nmf12	c-mer proto-oncogene tyrosine kinase	protein-coding
common_peak1-7613-49-128--1.00494343239807-5.02334770196273	chr1	59912645	59913963	+	0	NA	intron (NM_007561, intron 9 of 12)	intron (NM_007561, intron 9 of 12)	-56546	NM_001037725	72750	Mm.258250	NM_001037725	ENSMUSG00000041040	Fam117b	2810425F24Rik|6330416D14Rik|Als2cr13	family with sequence similarity 117, member B	protein-coding
unique_peak2-36577-7-6--0.00826409175941478-0.97990265578305	chr2	173754333	173754769	+	0	NA	Intergenic	Intergenic	-148001	NM_172675	228960	Mm.277977	NM_172675	ENSMUSG00000027522	Stx16	4930401D03|5430410K23Rik|6330500A18Rik|AI648908|AW553605|Syn16	syntaxin 16	protein-coding
unique_peak1-6015-9-2-1.60465090568306-1.87199725847353	chr6	108835319	108835765	+	0	NA	Intergenic	Intergenic	56907	NM_138677	192193	Mm.21596	NM_138677	ENSMUSG00000030104	Edem1	A130059K23Rik|EDEM|mKIAA0212	ER degradation enhancer, mannosidase alpha-like 1	protein-coding
common_peak2-31280-144-282--0.275028706389457-1.27202089867043	chr8	72134606	72136856	+	0	NA	exon (NM_172754, exon 5 of 5)	exon (NM_172754, exon 5 of 5)	13343	NM_001045553	234362	Mm.458487	NM_172754	ENSMUSG00000060427	Zfp868	AI449175|AW108241|C530032E20|mszf62	zinc finger protein 868	protein-coding
common_peak2-20435-26-48--0.686810751956746-1.2112076832151	chr10	33950610	33951466	+	0	NA	Intergenic	Intergenic	-23681	NM_172508	212898	Mm.34557	NM_172508	ENSMUSG00000039497	Dse	6030499O08|AI480506|B130024B19Rik|Sart2	dermatan sulfate epimerase	protein-coding
unique_peak1-2114-18-4-1.99099105634099-2.82951996911245	chr15	41615960	41616897	+	0	NA	intron (NM_001130166, intron 3 of 16)	intron (NM_001130166, intron 3 of 16)	-4152	NM_001130165	170719	Mm.254267	NM_130885	ENSMUSG00000022307	Oxr1	2210416C20Rik|C7|C7B	oxidation resistance 1	protein-coding
common_peak2-24091-11-7-0.508693584251613-1.21681515183528	chr16	31662670	31663134	+	0	NA	promoter-TSS (NM_001252435)	promoter-TSS (NM_001252435)	-627	NM_001252435	13383	Mm.382	NM_007862	ENSMUSG00000022770	Dlg1	B130052P05Rik|Dlgh1|E-dlg/SAP97|SAP-97|SAP97|mKIAA4187	discs, large homolog 1 (Drosophila)	protein-coding
unique_peak1-7030-8-4-0.683294323060208-1.21878474469819	chr8	126710761	126711273	+	0	NA	Intergenic	RCHARR1|DNA|MER1_type	-44277	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
unique_peak2-37487-1-9--2.94898510510411-2.31132995230379	chr5	5341906	5342442	+	0	NA	intron (NM_011074, intron 2 of 14)	intron (NM_011074, intron 2 of 14)	38077	NM_011074	18647	Mm.389061	NM_011074	ENSMUSG00000028926	Cdk14	Pftk1|mKIAA0834	cyclin-dependent kinase 14	protein-coding
common_peak2-20199-35-31-0.431370258462504-0.725458513490992	chr1	176813328	176814498	+	0	NA	intron (NM_011825, intron 1 of 1)	L1_Mus1|LINE|L1	38037	NM_011825	23893	Mm.25760	NM_011825	ENSMUSG00000050069	Grem2	Gremlin2|Prdc	gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis)	protein-coding
common_peak2-21202-17-25--0.482143379936054-0.479250674391597	chr11	60931044	60931913	+	0	NA	Intergenic	MTC|LTR|MaLR	-22859	NM_021349	57916	Mm.265915	NM_021349	ENSMUSG00000010142	Tnfrsf13b	1200009E08Rik|Taci	tumor necrosis factor receptor superfamily, member 13b	protein-coding
unique_peak2-36724-3-12--2.11442280810037-2.15846853396659	chr3	52531808	52532254	+	0	NA	Intergenic	B4A|SINE|B4	-11615	NR_038079	329639	Mm.131245	NR_038079		Gm2447	100039832|A530017F20	predicted gene 2447	ncRNA
common_peak2-26372-8-9--0.316705676939792-1.03275496310833	chr2	39325552	39325973	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-243904	NM_024209	67857	Mm.389242	NM_024209		Ppp6c	2310003C10Rik	protein phosphatase 6, catalytic subunit	protein-coding
common_peak2-28267-12-13--0.158578936969966-0.301029995663979	chr4	127076914	127077560	+	0	NA	Intergenic	PB1D10|SINE|Alu	-41829	NM_010291	14622	Mm.26859	NM_010291	ENSMUSG00000042357	Gjb5	Cnx31.1|Cx31.1|Gjb-5	gap junction protein, beta 5	protein-coding
unique_peak1-1121-7-2-1.21412832957703-1.45399745587252	chr11	94913377	94913884	+	0	NA	intron (NM_013565, intron 22 of 25)	intron (NM_013565, intron 22 of 25)	-10945	NM_133667	18604	Mm.29768	NM_133667	ENSMUSG00000038967	Pdk2	-	pyruvate dehydrogenase kinase, isoenzyme 2	protein-coding
common_peak1-19092-11-6-0.701338662194009-1.32595962126035	chr9	71689911	71690476	+	0	NA	Intergenic	Intergenic	53710	NM_001253864	21406	Mm.171615	NM_011544	ENSMUSG00000032228	Tcf12	A130037E08Rik|ALF1|HEB|HEBAlt|HTF-4|HTF4|ME1|REB|bHLHb20	transcription factor 12	protein-coding
common_peak2-29318-27-22-0.467983994838223-0.705485015404196	chr5	146692454	146693148	+	0	NA	Intergenic	Intergenic	-1371	NM_007818	13112	Mm.332844	NM_007818	ENSMUSG00000056035	Cyp3a11	AI256190|Cyp3a|IIIAm1|Pcn	cytochrome P450, family 3, subfamily a, polypeptide 11	protein-coding
common_peak1-8776-7-8--0.370834171144123-1.00793137938329	chr11	8472880	8473401	+	0	NA	intron (NM_001083587, intron 4 of 30)	intron (NM_001083587, intron 4 of 30)	91398	NM_001083587	319939	Mm.337820	NM_001083587	ENSMUSG00000020422	Tns3	BC023928|F830010I22Rik|TEM6|Tens1	tensin 3	protein-coding
common_peak2-28380-15-18--0.235762762887929-0.326591483156968	chr4	138453708	138454739	+	0	NA	intron (NM_028453, intron 4 of 7)	intron (NM_028453, intron 4 of 7)	15639	NM_028453	73162	Mm.238081	NM_028453	ENSMUSG00000041161	Otud3	3110030K17Rik	OTU domain containing 3	protein-coding
common_peak1-17113-29-23-0.527327579893955-0.844067898188802	chr6	113740148	113740979	+	0	NA	intron (NM_001036684, intron 8 of 19)	B3|SINE|B2	-49888	NM_024206	110379	Mm.29296	NM_024206	ENSMUSG00000030298	Sec13	1110003H02Rik|Sec13l1|Sec13r	SEC13 homolog (S. cerevisiae)	protein-coding
common_peak2-26806-17-27--0.589058583852566-0.604689589251113	chr2	150361977	150362882	+	0	NA	Intergenic	RLTR19-int|LTR|ERVK	-33722	NM_009977	13011	Mm.12965	NM_009977	ENSMUSG00000068129	Cst7	Cmap	cystatin F (leukocystatin)	protein-coding
unique_peak2-36890-7-14--1.10779976531033-0.817533494790411	chr3	95702450	95702957	+	0	NA	TTS (NM_146104)	TTS (NM_146104)	4859	NM_146134	226548	Mm.306954	NM_146104	ENSMUSG00000015750	Aph1a	6530402N02Rik|APH-1a	anterior pharynx defective 1a homolog (C. elegans)	protein-coding
common_peak2-23224-9-18--1.05831410703937-0.965105923112245	chr15	5143312	5143996	+	0	NA	intron (NM_026213, intron 2 of 4)	MIR|SINE|MIR	8094	NM_026213	67515	Mm.254979	NM_026213	ENSMUSG00000022151	Ttc33	2410099M07Rik|2900001O04Rik|AI507072|AW538342|Osrf	tetratricopeptide repeat domain 33	protein-coding
common_peak1-9205-8-10--0.454209200689727-1.078512453669	chr11	80818326	80818839	+	0	NA	intron (NM_001034013, intron 1 of 9)	L1_Mus1|LINE|L1	146691	NM_029367	75622	Mm.26988	NM_029367	ENSMUSG00000053184	Spaca3	1700025M08Rik|ALLP17|Lyc3|SLLP1|mSLLP1	sperm acrosome associated 3	protein-coding
unique_peak2-34955-9-10--0.269818212233077-1.05503135781948	chr15	93275516	93276171	+	0	NA	intron (NM_001083114, intron 4 of 7)	intron (NM_001083114, intron 4 of 7)	46948	NM_001285863	223828	Mm.74208	NM_146062	ENSMUSG00000036167	Pphln1	CR|HSPC206|HSPC232	periphilin 1	protein-coding
common_peak2-24689-46-74--0.330822747247079-0.619228716864119	chr17	44499441	44500668	+	0	NA	Intergenic	Intergenic	174533	NM_172621	224796	Mm.37666	NM_172621	ENSMUSG00000023959	Clic5	5730531E12Rik|B330005L24|Gm322|jbg	chloride intracellular channel 5	protein-coding
unique_peak2-34727-2-8--2.08737925770563-1.65811743852845	chr15	37397833	37398258	+	0	NA	intron (NM_001170866, intron 4 of 6)	L1Md_F3|LINE|L1	-8908	NM_001170868	52589	Mm.283370	NM_134094	ENSMUSG00000051359	Ncald	AI848120|D030020D09Rik|D15Ertd412e	neurocalcin delta	protein-coding
common_peak1-12388-101-124-0.288229952074333-0.961520638944296	chr17	69416455	69417884	+	0	NA	Intergenic	Intergenic	-88981	NM_013813	13823	Mm.131135	NM_013813	ENSMUSG00000024044	Epb4.1l3	4.1B|DAL1P|Dal1|Epb41l3|NBL3	erythrocyte protein band 4.1-like 3	protein-coding
unique_peak2-32949-9-34--1.93966961054075-3.66464198368355	chr10	41437046	41438186	+	0	NA	Intergenic	Intergenic	91853	NM_001243075	103268	Mm.338605	NM_026643	ENSMUSG00000019813	Cep57l1	2410017P07Rik|4930484D11Rik|AI607327|cep57R	centrosomal protein 57-like 1	protein-coding
unique_peak1-5953-11-7-0.508693584251613-1.21681515183528	chr6	91711237	91711805	+	0	NA	TTS (NM_001159507)	TTS (NM_001159507)	45866	NM_001159507	243547	Mm.333264	NM_001033353	ENSMUSG00000030098	Grip2	-	glutamate receptor interacting protein 2	protein-coding
unique_peak1-6995-17-1-3.21829633820504-4.59734841376773	chr8	121665055	121665737	+	0	NA	intron (NM_019707, intron 7 of 13)	intron (NM_019707, intron 7 of 13)	-203042	NM_024219	68196	Mm.358714	NM_024219	ENSMUSG00000031839	Hsbp1	0610007A03Rik|AA408769|Hsp25	heat shock factor binding protein 1	protein-coding
unique_peak2-39247-3-7--1.41398308995928-1.23214870625617	chr8	115707186	115707575	+	0	NA	Intergenic	Intergenic	116218	NR_033584	791378	Mm.350576	NR_033584		Gm10280	ENSMUSG00000069883	predicted gene 10280	ncRNA
unique_peak2-38240-5-7--0.704380336005853-1.01466476204226	chr6	120855755	120856189	+	0	NA	intron (NM_007544, intron 1 of 5)	intron (NM_007544, intron 1 of 5)	10866	NM_007544	12122	Mm.235081	NM_007544	ENSMUSG00000004446	Bid	2700049M22Rik|AI875481|AU022477	BH3 interacting domain death agonist	protein-coding
common_peak2-24793-44-55-0.0145379125109315-0.308785666485023	chr17	65737291	65738646	+	0	NA	intron (NM_001289485, intron 13 of 15)	intron (NM_001289485, intron 13 of 15)	152154	NM_001008973	381107	Mm.141275	NM_001008973	ENSMUSG00000045036	Tmem232	E130009J12Rik|Gm940|Tes13-L|Tes13-S	transmembrane protein 232	protein-coding
unique_peak2-34897-4-7--1.02346051385325-1.09384600808989	chr15	81693678	81694067	+	0	NA	Intergenic	Intergenic	-5116	NM_020507	57259	Mm.323595	NM_020507	ENSMUSG00000048546	Tob2	2900090N22Rik|4930545K18Rik|AV071822|mKIAA1663	transducer of ERBB2, 2	protein-coding
common_peak2-27343-22-12-0.946844386946312-1.31435121412491	chr3	75940079	75940773	+	0	NA	intron (NM_001253719, intron 1 of 15)	intron (NM_001253719, intron 1 of 15)	60921	NM_001253719	213262	Mm.379337	NM_178673	ENSMUSG00000034098	Fstl5	9130207J01Rik	follistatin-like 5	protein-coding
unique_peak2-35626-0-9--4.16205902536157-2.31132995230379	chr17	87315028	87315597	+	0	NA	Intergenic	(CACCAT)n|Simple_repeat|Simple_repeat	-1376	NM_001277980	78469	Mm.67234	NM_030104	ENSMUSG00000037689	Tmem247	1700090G07Rik	transmembrane protein 247	protein-coding
common_peak1-13255-12-22--0.874785970969374-0.809260849721102	chr19	32389181	32389679	+	0	NA	intron (NM_144792, intron 2 of 9)	intron (NM_144792, intron 2 of 9)	34376	NM_001168525	208449	Mm.329810	NM_144792	ENSMUSG00000040451	Sgms1	9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23	sphingomyelin synthase 1	protein-coding
unique_peak2-33364-3-4--0.73591118484664-0.864171920961574	chr11	32364023	32364392	+	0	NA	intron (NM_173784, intron 1 of 2)	intron (NM_173784, intron 1 of 2)	8835	NM_173784	327900	Mm.260956	NM_173784		Ubtd2	4930571L24|9630054F20Rik|AI645720	ubiquitin domain containing 2	protein-coding
unique_peak1-6734-8-1-2.00522241794757-2.05605744720049	chr8	45608508	45608959	+	0	NA	Intergenic	Intergenic	-426829	NM_001081286	14107	Mm.27365	NM_001081286	ENSMUSG00000070047	Fat1	2310038E12Rik|AU023433|Fath|mFat1	FAT tumor suppressor homolog 1 (Drosophila)	protein-coding
common_peak2-28390-45-40-0.502806020726788-1.02303743263849	chr4	139535426	139536496	+	0	NA	Intergenic	(CATA)n|Simple_repeat|Simple_repeat	-12020	NM_173427	242721	Mm.60400	NM_173427	ENSMUSG00000078234	Klhdc7a	B230308G19Rik	kelch domain containing 7A	protein-coding
common_peak2-28127-16-26--0.636623859895407-0.713114929964887	chr4	94978619	94979473	+	0	NA	Intergenic	Intergenic	-245152	NM_001113412	75578	Mm.276098	NM_029347	ENSMUSG00000028573	Fggy	2310009E04Rik	FGGY carbohydrate kinase domain containing	protein-coding
common_peak2-21240-9-15--0.81038659359578-0.630231561310125	chr11	68446194	68446743	+	0	NA	Intergenic	Intergenic	45929	NM_177779	276920	Mm.123046	NM_177779	ENSMUSG00000045915	Ccdc42	A530001H01Rik	coiled-coil domain containing 42	protein-coding
unique_peak2-33263-4-14--1.93035110946177-2.23384849113406	chr10	128525471	128525918	+	0	NA	Intergenic	RLTR19C|LTR|ERVK	5334	NM_146864	258863	Mm.377725	NM_146864	ENSMUSG00000050198	Olfr768	MOR114-4	olfactory receptor 768	protein-coding
common_peak1-8366-20-28--0.369906210536379-0.457753417732779	chr10	59907010	59907895	+	0	NA	intron (NR_045556, intron 14 of 68)	intron (NR_045556, intron 14 of 68)	44978	NM_001164374	100302688	Mm.444135	NM_001164374	ENSMUSG00000090439	Gm17455	-	predicted gene, 17455	protein-coding
common_peak1-17430-51-61-0.120727515215698-0.362125042338591	chr7	15922007	15923210	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-51592	NM_145708	246792	Mm.26391	NM_145708	ENSMUSG00000074369	Obox2	-	oocyte specific homeobox 2	protein-coding
common_peak1-11925-41-66--0.364940485609112-0.662566236663818	chr17	63863184	63864978	+	0	NA	Intergenic	Intergenic	-14152	NM_015794	50758	Mm.136366	NM_015794		Fbxl17	6330576B01Rik|AI452053|BB073797|C130023C01Rik|Fbx13|Fbxo13	F-box and leucine-rich repeat protein 17	protein-coding
unique_peak2-36409-11-10-0.0492619656143161-0.31137425193576	chr2	127079160	127079623	+	0	NA	intron (NM_175145, intron 2 of 3)	intron (NM_175145, intron 2 of 3)	5680	NM_175145	69470	Mm.200889	NM_175145	ENSMUSG00000034850	Tmem127	2310003P10Rik|AI314202|AI317350	transmembrane protein 127	protein-coding
common_peak1-10172-30-10-1.71024379085458-3.68843956647704	chr13	38735977	38737460	+	0	NA	TTS (NM_025380)	TTS (NM_025380)	-9740	NM_139063	17828	Mm.261554	NM_139063	ENSMUSG00000038982	Bloc1s5	1810074A19Rik|Muted|mu	biogenesis of lysosomal organelles complex-1, subunit 5, muted	protein-coding
common_peak2-24754-4-7--1.02346051385325-1.09384600808989	chr17	55931809	55932121	+	0	NA	intron (NM_139138, intron 7 of 16)	intron (NM_139138, intron 7 of 16)	42716	NM_139138	52614	Mm.210497	NM_139138	ENSMUSG00000032915	Emr4	D17Ertd479e|Egf-tm7|Fire|Gpr127	EGF-like module containing, mucin-like, hormone receptor-like sequence 4	protein-coding
common_peak2-26898-25-30--0.0923464050417691-0.304710633611958	chr2	158360590	158361671	+	0	NA	intron (NM_001145015, intron 6 of 14)	intron (NM_001145015, intron 6 of 14)	22598	NM_001145015	545481	Mm.125371	NM_001145015	ENSMUSG00000074625	Arhgap40	C20orf95|Gm14203|OTTMUSG00000015933	Rho GTPase activating protein 40	protein-coding
common_peak2-28496-23-12-1.02132778636799-1.44787515926925	chr5	39714805	39715539	+	0	NA	Intergenic	Intergenic	279641	NR_045416	75095	Mm.332354	NR_045416		4930513D17Rik	-	RIKEN cDNA 4930513D17 gene	ncRNA
unique_peak1-6487-7-3-0.799090830298189-1.23214870625617	chr7	112495830	112496217	+	0	NA	Intergenic	L1Md_T|LINE|L1	-9795	NM_147061	259063	Mm.377817	NM_147061	ENSMUSG00000043948	Olfr691	MOR31-6	olfactory receptor 691	protein-coding
unique_peak2-39117-1-7--2.62705701021674-1.80617997398389	chr8	82982853	82983313	+	0	NA	Intergenic	L1Md_T|LINE|L1	-34861	NM_010369	14934	Mm.13123	NM_010369	ENSMUSG00000051839	Gypa	AI853584|CD235a|GPA	glycophorin A	protein-coding
unique_peak1-6005-10-0-3.35641534500877-3.31132995230379	chr6	104983303	104983929	+	0	NA	Intergenic	Intergenic	459046	NR_040297	100503536	Mm.366960	NR_040297		Gm19757	-	predicted gene, 19757	ncRNA
common_peak1-8313-6-14--1.34149248522822-1.01572999746118	chr10	41450406	41450808	+	0	NA	intron (NM_001243074, intron 6 of 10)	intron (NM_001243074, intron 6 of 10)	78862	NM_001243075	103268	Mm.338605	NM_026643	ENSMUSG00000019813	Cep57l1	2410017P07Rik|4930484D11Rik|AI607327|cep57R	centrosomal protein 57-like 1	protein-coding
unique_peak1-2933-8-3-1.00522241794757-1.39487600375387	chr17	56124048	56124670	+	0	NA	Intergenic	ID_B1|SINE|B4	-1575	NM_183178	240121	Mm.270660	NM_183178	ENSMUSG00000011589	Fsd1	-	fibronectin type 3 and SPRY domain-containing protein	protein-coding
common_peak2-20523-25-19-0.539921810457743-0.756750750680359	chr10	62110524	62111069	+	0	NA	intron (NM_053183, intron 1 of 14)	ID_B1|SINE|B4	3150	NM_053183	94213	Mm.114116	NM_053183	ENSMUSG00000020076	Ddx50	4933429B04Rik|8430408E17Rik|GU2|RH-II	DEAD (Asp-Glu-Ala-Asp) box polypeptide 50	protein-coding
common_peak1-9337-32-24-0.635235829444936-1.08405458203115	chr11	95981182	95982521	+	0	NA	Intergenic	Intergenic	-8575	NM_001271018	76815	Mm.296049	NM_029755	ENSMUSG00000006056	Calcoco2	2410154J16Rik|C77254|Ndp52|Ndp52l1	calcium binding and coiled-coil domain 2	protein-coding
common_peak1-15354-35-44--0.0604828378671707-0.303525995925004	chr4	56946370	56947445	+	0	NA	intron (NM_175518, intron 3 of 17)	intron (NM_175518, intron 3 of 17)	13394	NM_175518	242474	Mm.296632	NM_175518		Tmem245	A630051L19Rik|AI957324|D730040F13Rik	transmembrane protein 245	protein-coding
common_peak2-31893-22-29--0.259606490521114-0.36542888694933	chr9	56927385	56928613	+	0	NA	intron (NM_001110350, intron 1 of 20)	intron (NM_001110350, intron 1 of 20)	3816	NM_011378	20466	Mm.15755	NM_011378	ENSMUSG00000042557	Sin3a	AW553200|Sin3|mKIAA4126|mSin3A	transcriptional regulator, SIN3A (yeast)	protein-coding
common_peak2-24884-13-16--0.30899081061257-0.330004445983672	chr17	83731543	83732179	+	0	NA	Intergenic	ID4_|SINE|ID	-18410	NM_001114361	78798	Mm.295565	NM_199466	ENSMUSG00000032624	Eml4	4930443C24Rik|AI644019	echinoderm microtubule associated protein like 4	protein-coding
common_peak2-30607-35-68--0.677154198315665-1.53425852299322	chr7	84689232	84690044	+	0	NA	Intergenic	Intergenic	1033086	NM_008746	18213	Mm.33496	NM_008746		Ntrk3	AW125844|Ntrk3_tv3|TrkC	neurotrophic tyrosine kinase, receptor, type 3	protein-coding
unique_peak1-6889-9-0-3.18961340640422-3.01029995663981	chr8	94356794	94357292	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	-31490	NM_008393	16373	Mm.238044	NM_008393	ENSMUSG00000031734	Irx3	AI894186	Iroquois related homeobox 3	protein-coding
unique_peak1-1091-10-4-1.03448725012141-1.5150158574804	chr11	88496389	88496966	+	0	NA	intron (NM_054043, intron 5 of 13)	MER44D|DNA|MER2_type	82866	NM_054043	76626	Mm.400451	NM_054043	ENSMUSG00000069769	Msi2	1700105C15Rik|AI451722|AI563628|AW489193|Msi2h	musashi RNA-binding protein 2	protein-coding
common_peak1-8842-8-10--0.454209200689727-1.078512453669	chr11	29514687	29515146	+	0	NA	Intergenic	Intergenic	-66876	NM_001033865	78294	Mm.180003	NM_024277	ENSMUSG00000020460	Rps27a	0610006J14Rik|Uba52|Ubb|Ubc	ribosomal protein S27A	protein-coding
unique_peak1-5691-10-7-0.356415345008769-1.12966497611638	chr6	34354735	34355241	+	0	NA	Intergenic	Charlie1b|DNA|MER1_type	-7374	NM_009731	11997	Mm.482073	NM_009731	ENSMUSG00000052131	Akr1b7	AR|Avdp|MVDP	aldo-keto reductase family 1, member B7	protein-coding
unique_peak1-2125-8-1-2.00522241794757-2.05605744720049	chr15	53254816	53255341	+	0	NA	Intergenic	Lx8|LINE|L1	-77340	NM_010162	14042	Mm.309395	NM_010162		Ext1	AA409028	exostoses (multiple) 1	protein-coding
unique_peak2-39352-2-5--1.50241675698448-1.08602067057793	chr9	4375807	4376242	+	0	NA	Intergenic	Intergenic	-7513	NM_145609	78100	Mm.206549	NM_145609	ENSMUSG00000041124	Msantd4	8430410K20Rik|Mysantd4	Myb/SANT-like DNA-binding domain containing 4 with coiled-coils	protein-coding
common_peak1-12860-12-9-0.326847890200276-0.459837087125828	chr18	75405499	75406006	+	0	NA	intron (NM_027727, intron 16 of 16)	L1MA4|LINE|L1	51219	NR_045394	100503117	Mm.250517	NR_045393		2010010A06Rik	5033420E22Rik	RIKEN cDNA 2010010A06 gene	ncRNA
unique_peak2-38742-4-7--1.02346051385325-1.09384600808989	chr7	113492664	113493074	+	0	NA	Intergenic	RMER5|LTR|ERV1	-24827	NR_030720	668128	Mm.484022	NR_030720		Gm8989	EG668128|Gm21911	very large inducible GTPase 1 pseudogene	pseudo
unique_peak2-36969-5-21--2.16381195464315-2.59995804677862	chr3	113373665	113374752	+	0	NA	Intergenic	L1Md_T|LINE|L1	-41141	NM_001038696	67225	Mm.316928	NM_026043	ENSMUSG00000027981	Rnpc3	2810441O16Rik|AI447568|C030014B17Rik	RNA-binding region (RNP1, RRM) containing 3	protein-coding
unique_peak2-33188-0-6--3.64748585253182-1.56314192529759	chr10	96750584	96750921	+	0	NA	Intergenic	Intergenic	-135360	NR_039547	100628616		NR_039547		Mir3966	mmu-mir-3966|mu-mir-3966	microRNA 3966	ncRNA
common_peak2-19741-35-43--0.0280613601747932-0.301029995663985	chr1	74386357	74387815	+	0	NA	intron (NM_019999, intron 1 of 8)	intron (NM_019999, intron 1 of 8)	7902	NM_019999	56695	Mm.384726	NM_019999	ENSMUSG00000026179	Pnkd	2210013N15Rik|2810403H05Rik|AI854243|Brp17|MNCb-5687|MR-1|Tahccp2	paroxysmal nonkinesiogenic dyskinesia	protein-coding
common_peak2-26270-31-23-0.640276170091967-1.01695873136768	chr2	30693420	30694019	+	0	NA	Intergenic	ID_B1|SINE|B4	-7168	NM_009116	20204	Mm.1802	NM_009116	ENSMUSG00000039476	Prrx2	Prx2|S8	paired related homeobox 2	protein-coding
unique_peak2-33653-7-13--1.00826409175941-0.697979855752659	chr11	99658314	99658986	+	0	NA	TTS (NM_001099313)	TTS (NM_001099313)	-4044	NM_001099311	670464	Mm.473676	NM_001099311		Gm11596	OTTMUSG00000002547	predicted gene 11596	protein-coding
unique_peak2-33631-0-6--3.64748585253182-1.56314192529759	chr11	98204012	98204563	+	0	NA	Intergenic	Intergenic	-5765	NM_144828	19049	Mm.45372	NM_144828	ENSMUSG00000061718	Ppp1r1b	AU040756|DARPP-32|Darpp32	protein phosphatase 1, regulatory (inhibitor) subunit 1B	protein-coding
common_peak1-9739-9-11--0.395349094316936-0.344532117358383	chr12	45074489	45075128	+	0	NA	Intergenic	L1Md_T|LINE|L1	236247	NM_013760	27362	Mm.27432	NM_013760	ENSMUSG00000014905	Dnajb9	AA408011|AA673251|AA673481|AW556981|ERdj4|Mdg1|mDj7	DnaJ (Hsp40) homolog, subfamily B, member 9	protein-coding
unique_peak1-2078-12-2-2.06381348436648-2.79529063155376	chr15	36869473	36870018	+	0	NA	Intergenic	Intergenic	67412	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
common_peak2-25425-9-9--0.132314688483142-1.03275496310833	chr19	3388911	3389267	+	0	NA	promoter-TSS (NM_001286558)	promoter-TSS (NM_001286558)	232	NM_001039657	17771	Mm.209941	NM_010841	ENSMUSG00000024905	Mtl5	tesmin	metallothionein-like 5, testis-specific (tesmin)	protein-coding
common_peak2-23407-16-9-0.796335547380699-0.844317084070804	chr15	59481159	59481641	+	0	NA	intron (NM_144549, intron 1 of 2)	intron (NM_144549, intron 1 of 2)	1191	NM_144549	211770	Mm.40298	NM_144549	ENSMUSG00000032501	Trib1	A530090O15Rik|TRB-1|Trb1	tribbles homolog 1 (Drosophila)	protein-coding
common_peak2-24145-27-31--0.00845404910476422-0.304476922018591	chr16	37684791	37685583	+	0	NA	Intergenic	Intergenic	-30733	NM_026610	68194	Mm.379154	NM_026610		Ndufb4	0610006N12Rik|1300010H20Rik	NADH dehydrogenase (ubiquinone) 1 beta subcomplex 4	protein-coding
common_peak1-18522-9-22--1.33394854965279-1.52222891542741	chr8	92355767	92356258	+	0	NA	Intergenic	Intergenic	516139	NM_172913	244579	Mm.302755	NM_172913	ENSMUSG00000043668	Tox3	500-9|BC052044|C230068E13|CAGF9|Tnrc9	TOX high mobility group box family member 3	protein-coding
unique_peak1-5568-8-1-2.00522241794757-2.05605744720049	chr5	147261294	147261781	+	0	NA	intron (NM_145155, intron 3 of 9)	L1Md_F|LINE|L1	-31982	NM_001243104	623198	Mm.489582	NM_001243104	ENSMUSG00000096344	Gm6408	-	predicted gene 6408	protein-coding
common_peak1-11124-21-13-0.762134343208631-1.0220094258199	chr15	64311695	64312728	+	0	NA	Intergenic	Intergenic	-97730	NM_010026	13196	Mm.277236	NM_010026	ENSMUSG00000022377	Asap1	AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19	ArfGAP with SH3 domain, ankyrin repeat and PH domain1	protein-coding
common_peak1-8099-27-17-0.821620949452924-1.31432283146954	chr1	181231888	181232933	+	0	NA	intron (NM_027188, intron 5 of 11)	PB1D10|SINE|Alu	215724	NM_027188	69726	Mm.222338	NM_027188		Smyd3	2410008A19Rik|Zmynd1	SET and MYND domain containing 3	protein-coding
unique_peak1-5209-11-5-0.923731083530457-1.477227296591	chr5	36043445	36043984	+	0	NA	intron (NM_194344, intron 14 of 17)	L2b|LINE|L2	-21285	NM_030127	78558	Mm.274255	NM_030127	ENSMUSG00000029096	Htra3	2210021K23Rik|9530081K03Rik|Prsp|Tasp	HtrA serine peptidase 3	protein-coding
unique_peak1-105-12-4-1.32684789020028-2.04196296489515	chr1	54600968	54601541	+	0	NA	intron (NM_001163314, intron 3 of 26)	B3|SINE|B2	13274	NM_001163314	241062	Mm.103539	NM_175508	ENSMUSG00000073678	Pgap1	5033403E17Rik|9030223K07Rik|A530084K22|D230012E17Rik|oto	post-GPI attachment to proteins 1	protein-coding
common_peak1-11056-40-17-1.48905068130879-4.16417428121602	chr15	55138830	55140113	+	0	NA	5' UTR (NM_181277, exon 1 of 48)	5' UTR (NM_181277, exon 1 of 48)	166	NM_181277	12818	Mm.297859	NM_181277	ENSMUSG00000022371	Col14a1	5730412L22Rik|AW108078	collagen, type XIV, alpha 1	protein-coding
common_peak2-19771-30-40--0.187876595126211-0.346766333527252	chr1	82316155	82317118	+	0	NA	intron (NM_029777, intron 1 of 6)	intron (NM_029777, intron 1 of 6)	3482	NM_029777	76867	Mm.226994	NM_029777	ENSMUSG00000026142	Rhbdd1	4930418P06Rik|RRP4|mRHBDD1	rhomboid domain containing 1	protein-coding
common_peak2-31419-33-39-0.00940946763816619-0.303778768325576	chr8	94385902	94387133	+	0	NA	Intergenic	Intergenic	-60964	NM_008393	16373	Mm.238044	NM_008393	ENSMUSG00000031734	Irx3	AI894186	Iroquois related homeobox 3	protein-coding
unique_peak2-38937-4-10--1.48289213249054-1.5150158574804	chr8	25017333	25017709	+	0	NA	intron (NM_177086, intron 4 of 6)	intron (NM_177086, intron 4 of 6)	237388	NM_177086	320158	Mm.121274	NM_177086	ENSMUSG00000037492	Zmat4	9630048M01Rik	zinc finger, matrin type 4	protein-coding
common_peak1-10028-23-25-0.0213277863679888-0.30528805757448	chr13	12702104	12703284	+	0	NA	TTS (NM_026184)	TTS (NM_026184)	39968	NR_003568	664862	Mm.415635	NR_003568		Gpr137b-ps	2310041G17Rik|ENSMUSG00000075118	G protein-coupled receptor 137B, pseudogene	pseudo
unique_peak1-5542-21-3-2.56948926526624-4.33845181153635	chr5	140767556	140768451	+	0	NA	intron (NM_010752, intron 9 of 17)	intron (NM_010752, intron 9 of 17)	29503	NM_010752	17120	Mm.27250	NM_010752	ENSMUSG00000029554	Mad1l1	AI173502|AW550425|Mad1	MAD1 mitotic arrest deficient 1-like 1	protein-coding
common_peak1-18891-14-13-0.0918612383000403-0.332077462497413	chr9	35267898	35268489	+	0	NA	intron (NM_021339, intron 6 of 18)	ORR1E|LTR|MaLR	8532	NM_021339	57810	Mm.80509	NM_021339	ENSMUSG00000038119	Cdon	CDO|Cd0|Orcam	cell adhesion molecule-related/down-regulated by oncogenes	protein-coding
common_peak1-18129-77-97-0.169816735440789-0.478431179756661	chr8	8689534	8690868	+	0	NA	promoter-TSS (NR_106114)	promoter-TSS (NR_106114)	-39	NR_106114	102465762		NR_106114		Mir7654	mmu-mir-7654	microRNA mir-7654	ncRNA
common_peak1-13977-19-32--0.641706792696767-0.800403172662453	chr2	100519290	100520033	+	0	NA	Intergenic	MIR3|SINE|MIR	-945244	NM_009020	19374	Mm.4988	NM_009020	ENSMUSG00000032864	Rag2	Rag-2	recombination activating gene 2	protein-coding
common_peak2-22499-22-22-0.123722149030391-0.342639663781856	chr13	51891929	51892796	+	0	NA	Intergenic	Intergenic	-3246	NM_013660	20354	Mm.33903	NM_013660	ENSMUSG00000021451	Sema4d	CD100|Semacl2|Semaj|Semcl2|coll-4	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D	protein-coding
common_peak1-13713-6-24--2.07845807939442-2.81226952737395	chr2	30719280	30719786	+	0	NA	intron (NM_009116, intron 1 of 3)	(TCTCTG)n|Simple_repeat|Simple_repeat	18646	NM_009116	20204	Mm.1802	NM_009116	ENSMUSG00000039476	Prrx2	Prx2|S8	paired related homeobox 2	protein-coding
common_peak1-17076-50-45-0.517378360421939-1.16897173470069	chr6	108535635	108537058	+	0	NA	intron (NR_104577, intron 3 of 6)	B4|SINE|B4	36815	NR_040757	75394	Mm.395061	NR_040757	ENSMUSG00000087341	0610040F04Rik	-	RIKEN cDNA 0610040F04 gene	ncRNA
unique_peak1-4884-13-5-1.19350952991661-1.95509489018123	chr4	41025913	41026565	+	0	NA	Intergenic	Intergenic	18977	NM_016689	11828	Mm.34043	NM_016689	ENSMUSG00000028435	Aqp3	AQP-2	aquaporin 3	protein-coding
unique_peak2-39338-2-4--1.23938235115068-0.931118710592187	chr9	108134359	108134656	+	0	NA	intron (NM_001276485, intron 1 of 2)	B2_Mm2|SINE|B2	31639	NM_010017	13138	Mm.7524	NM_010017		Dag1	D9Wsu13e|DG|Dp427|Dp71	dystroglycan 1	protein-coding
common_peak1-16812-80-78-0.546795018192249-1.85088917083482	chr6	47787872	47789347	+	0	NA	intron (NM_173034, intron 1 of 4)	MER5A1|DNA|MER1_type	2949	NM_027477	272347	Mm.169059	NM_027477	ENSMUSG00000062519	Zfp398	5730513I23Rik	zinc finger protein 398	protein-coding
unique_peak1-4664-32-15-1.27909201921966-2.70027529094734	chr3	92215121	92216103	+	0	NA	Intergenic	Lx5|LINE|L1	3699	NM_011475	20763	Mm.196439	NM_011475	ENSMUSG00000042157	Sprr2i	-	small proline-rich protein 2I	protein-coding
common_peak2-20091-11-24--1.13516260552311-1.3750876294627	chr1	156615598	156616435	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-42966	NM_009782	12290	Mm.267517	NM_009782	ENSMUSG00000004110	Cacna1e	A430040I15|BII|Cach6|Cacnl1a6|Cav2.3|Cchra1|alpha1E	calcium channel, voltage-dependent, R type, alpha 1E subunit	protein-coding
unique_peak1-6489-34-8-2.21214352555895-5.80521965470947	chr7	112690775	112692123	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-11425	NM_011421	20597	Mm.4628	NM_011421	ENSMUSG00000037049	Smpd1	A-SMase|ASM|Zn-SMase|aSMase	sphingomyelin phosphodiesterase 1, acid lysosomal	protein-coding
common_peak2-23370-33-41--0.0609798602532319-0.303710893903464	chr15	55071641	55072660	+	0	NA	intron (NM_145470, intron 8 of 8)	intron (NM_145470, intron 8 of 8)	-67155	NM_181277	12818	Mm.297859	NM_181277	ENSMUSG00000022371	Col14a1	5730412L22Rik|AW108078	collagen, type XIV, alpha 1	protein-coding
common_peak1-8998-11-12--0.191746133889479-0.310474156842889	chr11	60046033	60046565	+	0	NA	intron (NM_001039092, intron 12 of 13)	intron (NM_001039092, intron 12 of 13)	-12193	NM_011480	20787	Mm.278701	NM_011480	ENSMUSG00000020538	Srebf1	ADD-1|ADD1|D630008H06|SREBP-1|SREBP-1a|SREBP-1c|SREBP1|SREBP1c|bHLHd1	sterol regulatory element binding transcription factor 1	protein-coding
common_peak2-31420-6-7--0.434601889619698-0.97990265578305	chr8	94675640	94676068	+	0	NA	Intergenic	(TTCC)n|Simple_repeat|Simple_repeat	204165	NR_110452	71296	Mm.86664	NR_033641	ENSMUSG00000031736	Crnde	4933436C20Rik	colorectal neoplasia differentially expressed (non-protein coding)	ncRNA
common_peak2-28282-18-20--0.0793982715504091-0.301029995663976	chr4	129742348	129743236	+	0	NA	intron (NM_028266, intron 30 of 69)	intron (NM_028266, intron 30 of 69)	17708	NM_028266	107581	Mm.41860	NM_028266	ENSMUSG00000040690	Col16a1	2700007F12Rik|A530052M23Rik|AI838662|CA1F	collagen, type XVI, alpha 1	protein-coding
unique_peak1-5269-9-3-1.18961340640422-1.57096726280955	chr5	64598780	64599305	+	0	NA	intron (NM_019636, intron 2 of 19)	intron (NM_019636, intron 2 of 19)	-22554	NM_001289514	57915	Mm.286353	NM_019636	ENSMUSG00000029174	Tbc1d1	1110062G02Rik|AI385682|AW555803|Tbc1|mKIAA1108	TBC1 domain family, member 1	protein-coding
common_peak2-31676-16-7-1.11826364226806-1.23399803405144	chr8	126844985	126845397	+	0	NA	intron (NM_139272, intron 3 of 15)	intron (NM_139272, intron 3 of 15)	89897	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
unique_peak1-5158-36-10-2.01988946753046-5.53229495488999	chr5	24776582	24778096	+	0	NA	TTS (NM_001081383)	TTS (NM_001081383)	48628	NM_144908	231050	Mm.246718	NM_144908	ENSMUSG00000038072	Galnt11	A430075I06Rik|AI648252|E430002F06Rik	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11	protein-coding
unique_peak2-34541-8-10--0.454209200689727-1.078512453669	chr14	56120185	56120843	+	0	NA	intron (NM_001024645, intron 29 of 39)	intron (NM_001024645, intron 29 of 39)	-8771	NM_001146183	12891	Mm.5249	NM_009947	ENSMUSG00000022212	Cpne6	AU067659|BB076446	copine VI	protein-coding
unique_peak1-1633-12-6-0.841421063030034-1.58711810488664	chr13	48977862	48978508	+	0	NA	intron (NM_001033268, intron 17 of 17)	L1MC1|LINE|L1	-11931	NM_011078	18676	Mm.486213	NM_011078	ENSMUSG00000038025	Phf2	GRC5	PHD finger protein 2	protein-coding
unique_peak1-5183-16-3-2.11826364226806-2.65002542325363	chr5	30968510	30969293	+	0	NA	promoter-TSS (NM_007681)	promoter-TSS (NM_007681)	-374	NM_007681	12615	Mm.290563	NM_007681	ENSMUSG00000029177	Cenpa	Cenp-A	centromere protein A	protein-coding
common_peak2-31701-10-21--1.10301627362853-1.16735254179725	chr9	50658968	50659622	+	0	NA	Intergenic	Intergenic	-5734	NM_001034085	73699	Mm.7726	NM_028614	ENSMUSG00000032058	Ppp2r1b	2410091N08Rik|AI790395	protein phosphatase 2, regulatory subunit A, beta	protein-coding
unique_peak2-37514-10-14--0.550475250599749-0.446472590016315	chr5	18359880	18360667	+	0	NA	Intergenic	L1Md_T|LINE|L1	372100	NR_102342	70832	Mm.398993	NR_102341	ENSMUSG00000097626	4921504A21Rik	-	RIKEN cDNA 4921504A21 gene	ncRNA
common_peak2-26688-39-49--0.0280949428555708-0.301029995663988	chr2	125858248	125859238	+	0	NA	intron (NM_029455, intron 11 of 16)	intron (NM_029455, intron 11 of 16)	-1651	NM_008008	14178	Mm.330557	NM_008008	ENSMUSG00000027208	Fgf7	Kgf	fibroblast growth factor 7	protein-coding
common_peak1-17840-21-18-0.32156175182265-0.48779450977742	chr7	110648132	110648913	+	0	NA	Intergenic	Lx7|LINE|L1	6936	NM_147081	259085	Mm.377830	NM_147081	ENSMUSG00000045584	Olfr610	MOR9-2	olfactory receptor 610	protein-coding
unique_peak2-34571-1-8--2.79698201165906-2.05605744720049	chr14	66200087	66200647	+	0	NA	intron (NR_045599, intron 5 of 14)	Lx8|LINE|L1	11582	NM_001253812	74195	Mm.29719	NM_028811	ENSMUSG00000022031	Elp3	2610507P14Rik|KAT9	elongator acetyltransferase complex subunit 3	protein-coding
common_peak2-25113-44-18-1.57396532112495-4.9284567812766	chr18	37883653	37884356	+	0	NA	intron (NM_033576, intron 1 of 3)	RSINE1|SINE|B4	-1356	NM_033591	93716	Mm.247203	NM_033591	ENSMUSG00000023036	Pcdhga8	mKIAA4054	protocadherin gamma subfamily A, 8	protein-coding
unique_peak2-34011-8-15--0.994777582052429-0.771068449301683	chr12	102704995	102705463	+	0	NA	intron (NM_173023, intron 7 of 26)	L1Md_F3|LINE|L1	62346	NM_173023	271036	Mm.84218	NM_173023	ENSMUSG00000047014	Catsperb	4931410B03|4932415G16Rik	catsper channel auxiliary subunit beta	protein-coding
common_peak2-29131-106-100-0.679555372253924-3.51738288975994	chr5	124482417	124484205	+	0	NA	Intergenic	Intergenic	-1042	NM_177876	330192	Mm.4079	NM_177876	ENSMUSG00000066278	Vps37b	2300007F24Rik|AI415429|BC026744	vacuolar protein sorting 37B (yeast)	protein-coding
unique_peak1-5676-12-3-1.64877598508764-2.36932189928148	chr6	31284411	31284950	+	0	NA	intron (NR_040259, intron 4 of 5)	intron (NR_040259, intron 4 of 5)	64093	NR_040300	100503869	Mm.370532	NR_040300	ENSMUSG00000086212	Mkln1os	Gm13845|OTTMUSG00000014733	muskelin 1, intracellular mediator containing kelch motifs, opposite strand	ncRNA
unique_peak2-38309-6-7--0.434601889619698-0.97990265578305	chr6	140621074	140621543	+	0	NA	intron (NM_009637, intron 8 of 8)	intron (NM_009637, intron 8 of 8)	48489	NM_009637	11569	Mm.86453	NM_009637	ENSMUSG00000030232	Aebp2	AU023766|B230313N05Rik	AE binding protein 2	protein-coding
unique_peak2-35967-4-6--0.830815435910851-0.989110657569874	chr19	17397290	17397594	+	0	NA	Intergenic	Intergenic	16553	NM_001136484	14537	Mm.244825	NM_010265	ENSMUSG00000038843	Gcnt1	5630400D21Rik|B130048E03|C2 GlcNAcT|C2GNT|IGnT	glucosaminyl (N-acetyl) transferase 1, core 2	protein-coding
common_peak2-28486-10-16--0.73104749624157-0.604422558181019	chr4	155624812	155625287	+	0	NA	Intergenic	ORR1C2|LTR|MaLR	-16083	NM_198305	231003	Mm.423038	NM_198305	ENSMUSG00000078484	Klhl17	AL022703|BC058738	kelch-like 17	protein-coding
common_peak1-16419-114-124-0.49817023704628-2.33810062293243	chr5	129724327	129725978	+	0	NA	Intergenic	L1M4|LINE|L1	122527	NM_001081342	243277	Mm.440501	NM_177734	ENSMUSG00000044017	Gpr133	E230012M21Rik	G protein-coupled receptor 133	protein-coding
unique_peak1-1198-7-2-1.21412832957703-1.45399745587252	chr11	103313648	103314106	+	0	NA	Intergenic	L1M2|LINE|L1	-39899	NM_183034	353047	Mm.383308	NM_183034	ENSMUSG00000034247	Plekhm1	AP162|B2|BC038943|D330036J23Rik	pleckstrin homology domain containing, family M (with RUN domain) member 1	protein-coding
unique_peak1-4420-13-3-1.77847203063777-2.58603100924543	chr2	167828136	167828657	+	0	NA	intron (NM_001080708, intron 2 of 21)	MIRm|SINE|MIR	7697	NM_001080708	69553	Mm.68454	NM_001080708	ENSMUSG00000074577	Fam65c	2310033K02Rik|Gm124	family with sequence similarity 65, member C	protein-coding
common_peak2-21300-15-15-0.0121647505556561-0.30803596071496	chr11	72689836	72690736	+	0	NA	intron (NM_001045536, intron 30 of 54)	intron (NM_001045536, intron 30 of 54)	80558	NM_001045536	195018	Mm.272030	NM_001045536	ENSMUSG00000055670	Zzef1	8430405D05Rik|BC051585|C130099L13Rik|C85424|mKIAA0399	zinc finger, ZZ-type with EF hand domain 1	protein-coding
unique_peak1-3671-15-0-4.01216475055566-5.11750992628768	chr19	41443176	41443865	+	0	NA	intron (NM_031376, intron 2 of 16)	B1_Mur3|SINE|Alu	16040	NM_031376	83490	Mm.222266	NM_031376	ENSMUSG00000025017	Pik3ap1	1810044J04Rik|BCAP	phosphoinositide-3-kinase adaptor protein 1	protein-coding
common_peak1-15560-8-7-0.00522241794757061-1.00793137938329	chr4	125066634	125067013	+	0	NA	Intergenic	Intergenic	-101252	NM_001081097	14807	Mm.40896	NM_001081097	ENSMUSG00000001985	Grik3	9630027E11|GluK3|GluR7-3|Glur-7|Glur7	glutamate receptor, ionotropic, kainate 3	protein-coding
common_peak2-29500-15-12-0.311725032414564-0.425539671739611	chr6	31563383	31563994	+	0	NA	Intergenic	Intergenic	-49751	NM_013723	27205	Mm.89918	NM_013723	ENSMUSG00000025608	Podxl	AW121214|Ly102|PC|PCLP-1|Pclp1	podocalyxin-like	protein-coding
common_peak1-11288-16-8-0.948338640825749-1.02063122982878	chr15	83343474	83344303	+	0	NA	Intergenic	ORR1A4|LTR|MaLR	-2551	NM_178869	319953	Mm.235007	NM_178869	ENSMUSG00000022442	Ttll1	6330444E16Rik|AV014541	tubulin tyrosine ligase-like 1	protein-coding
common_peak2-31037-27-55--0.815808971162368-1.63721186903097	chr8	13757294	13758239	+	0	NA	promoter-TSS (NM_027276)	promoter-TSS (NM_027276)	76	NM_027276	69957	Mm.182412	NM_027276	ENSMUSG00000038416	Cdc16	2700071J12Rik|2810431D22Rik|APC6	CDC16 cell division cycle 16	protein-coding
unique_peak2-37716-1-7--2.62705701021674-1.80617997398389	chr5	104656154	104656558	+	0	NA	Intergenic	Intergenic	24720	NM_016779	13406	Mm.199008	NM_016779	ENSMUSG00000029307	Dmp1	AV020965|Dmp|PP	dentin matrix protein 1	protein-coding
common_peak1-14995-24-25-0.0927701846266249-0.337923771396236	chr3	108257174	108257978	+	0	NA	Intergenic	B3|SINE|B2	-9399	NM_001204979	20226	Mm.28688	NM_011319	ENSMUSG00000068739	Sars	Sars1|Strs|serRS	seryl-aminoacyl-tRNA synthetase	protein-coding
common_peak1-7682-10-17--0.813509656433543-0.699649909729472	chr1	79746314	79746850	+	0	NA	intron (NM_027057, intron 1 of 4)	intron (NM_027057, intron 1 of 4)	11762	NM_001111279	69368	Mm.293273	NM_027057	ENSMUSG00000073643	Wdfy1	1700013B03Rik|1700120F24Rik|FENS-1|Jr1|WDF1|ZFYVE17|mKIAA1435	WD repeat and FYVE domain containing 1	protein-coding
unique_peak1-876-8-3-1.00522241794757-1.39487600375387	chr11	31199678	31200271	+	0	NA	Intergenic	Intergenic	70087	NM_011491	20856	Mm.32506	NM_011491		Stc2	AW125853|Stc2l|mustc2	stanniocalcin 2	protein-coding
common_peak1-16772-26-8-1.75797409071615-3.2467506969819	chr6	37465133	37466274	+	0	NA	Intergenic	L1VL1|LINE|L1	-14470	NM_145364	208665	Mm.262635	NM_145364	ENSMUSG00000038641	Akr1d1	-	aldo-keto reductase family 1, member D1	protein-coding
common_peak2-24945-16-14-0.211373046659543-0.364171515310935	chr18	36404917	36405550	+	0	NA	Intergenic	B4A|SINE|B4	-35583	NM_008989	19290	Mm.231802	NM_008989		Pura	CAGER-1|Pur-alpha|ssCRE-BP	purine rich element binding protein A	protein-coding
common_peak1-16598-23-51--0.978672213632011-2.09593985174545	chr5	149229116	149230046	+	0	NA	Intergenic	B3|SINE|B2	-18101	NM_007513	11987	Mm.275489	NM_007513	ENSMUSG00000041313	Slc7a1	4831426K01Rik|AI447493|Atrc-1|Atrc1|Cat1|Rec-1|Rev-1|mCAT-1	solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	protein-coding
unique_peak2-37046-7-8--0.370834171144123-1.00793137938329	chr3	134740227	134740765	+	0	NA	Intergenic	Intergenic	-135031	NM_173762	229841	Mm.161470	NM_173762	ENSMUSG00000045328	Cenpe	312kDa|AU019344|BC049989|C530022J18|CENP-E|Kif10	centromere protein E	protein-coding
unique_peak1-1426-7-1-1.79909083029819-1.80617997398389	chr12	85158953	85159452	+	0	NA	intron (NR_073563, intron 5 of 10)	intron (NR_073563, intron 5 of 10)	24106	NM_001272055	18222	Mm.4390	NM_010949	ENSMUSG00000021224	Numb	Nb	numb gene homolog (Drosophila)	protein-coding
common_peak1-19230-45-36-0.650904659715922-1.42954500397923	chr9	108144704	108147007	+	0	NA	intron (NM_001276492, intron 2 of 4)	B3|SINE|B2	20291	NM_010017	13138	Mm.7524	NM_010017		Dag1	D9Wsu13e|DG|Dp427|Dp71	dystroglycan 1	protein-coding
unique_peak2-39416-9-18--1.05831410703937-0.965105923112245	chr9	41105078	41105764	+	0	NA	Intergenic	Lx7|LINE|L1	-79223	NR_040725	73144	Mm.482850	NR_040725		3110039I08Rik	-	RIKEN cDNA 3110039I08 gene	ncRNA
common_peak1-16174-8-4-0.683294323060208-1.21878474469819	chr5	90785616	90786097	+	0	NA	intron (NM_030886, intron 2 of 34)	intron (NM_030886, intron 2 of 34)	9355	NM_030886	81702	Mm.245522	NM_030886	ENSMUSG00000055204	Ankrd17	4933425K22Rik|A130069E23Rik|A930008M01|AA407558|AA516750|AU040470|Foe|Gtar|Mask|mKIAA0697	ankyrin repeat domain 17	protein-coding
common_peak2-31820-16-21--0.341167976369236-0.392630012299441	chr9	41950538	41951228	+	0	NA	Intergenic	Intergenic	-18511	NM_011436	20660	Mm.121920	NM_011436		Sorl1	2900010L19Rik|AI596264|AW261561|LR11|SorLA|gp250|mSorLA	sortilin-related receptor, LDLR class A repeats-containing	protein-coding
common_peak2-27439-13-10-0.319040412000471-0.446472590016315	chr3	89901164	89901639	+	0	NA	intron (NM_001271764, intron 8 of 8)	B2_Mm2|SINE|B2	-6653	NM_029937	77595	Mm.159949	NM_029937	ENSMUSG00000027939	Nup210l	4930548O11Rik|R26-EGFP|Tg(Gt(ROSA)26Sor-EGFP)130910Eps	nucleoporin 210-like	protein-coding
common_peak2-25892-9-8-0.0196884049619079-1.03275496310833	chr19	45057003	45057557	+	0	NA	3' UTR (NM_001081225, exon 20 of 20)	3' UTR (NM_001081225, exon 20 of 20)	1760	NR_040294	73894	Mm.491408	NR_040294		4930414N06Rik	-	RIKEN cDNA 4930414N06 gene	ncRNA
common_peak2-30834-17-11-0.633333837483882-0.769930178837768	chr7	132345866	132346491	+	0	NA	Intergenic	Lx8|LINE|L1	147122	NR_045804	71208	Mm.159465	NM_172408		4933440M02Rik	-	RIKEN cDNA 4933440M02 gene	ncRNA
common_peak2-20466-10-10--0.103016273628528-0.301029995663987	chr10	43689317	43689720	+	0	NA	intron (NM_172393, intron 11 of 19)	intron (NM_172393, intron 11 of 19)	35134	NM_172393	11630	Mm.292082	NM_172393	ENSMUSG00000019866	Aim1	AI462491|AI463325	absent in melanoma 1	protein-coding
common_peak2-28655-29-38--0.173112138247138-0.327809114039775	chr5	31179576	31180975	+	0	NA	TTS (NM_144525)	TTS (NM_144525)	8255	NM_144525	68796	Mm.205169	NM_144525		Tmem214	1110039B18Rik|4921530J21Rik|AI841294|AU018742|C76280	transmembrane protein 214	protein-coding
unique_peak1-932-17-5-1.63333383748388-2.19184853030482	chr11	53457057	53457799	+	0	NA	Intergenic	ID_B1|SINE|B4	-9224	NM_008355	16163	Mm.1284	NM_008355	ENSMUSG00000020383	Il13	Il-13	interleukin 13	protein-coding
common_peak2-24805-20-20-0.0957573618124323-0.321718508207528	chr17	66749951	66750647	+	0	NA	intron (NM_001114098, intron 3 of 14)	L1_Mus4|LINE|L1	48791	NM_172963	68617	Mm.33421	NM_172963	ENSMUSG00000052105	Mtcl1	1110012J17Rik|Ccdc165|D130071O13|Kiaa0802|Soga2|mKIAA0802|t8219b25	microtubule crosslinking factor 1	protein-coding
unique_peak2-38266-5-11--1.28934283672701-1.477227296591	chr6	127332045	127332603	+	0	NA	Intergenic	Intergenic	-71417	NM_181402	101187	Mm.110818	NM_181402	ENSMUSG00000037997	Parp11	5330431N24Rik|AI851877|ARTD11|HIN1L	poly (ADP-ribose) polymerase family, member 11	protein-coding
common_peak1-17689-9-6-0.382258484346616-1.11707584880836	chr7	67645637	67646209	+	0	NA	Intergenic	Intergenic	-360818	NM_001082962	20646	Mm.274995	NM_013670	ENSMUSG00000000948	Snrpn	2410045I01Rik|HCERN3|Peg4|Pwcr1|SMN	small nuclear ribonucleoprotein N	protein-coding
common_peak1-16914-25-25-0.161410187204014-0.36542888694933	chr6	72641626	72642624	+	0	NA	intron (NM_009332, intron 3 of 11)	intron (NM_009332, intron 3 of 11)	62300	NR_040421	100038714	Mm.321330	NR_040421		Gm15401	ENSMUSG00000072999|OTTMUSG00000021199	predicted gene 15401	ncRNA
common_peak1-19232-8-6-0.197867495889966-1.03789460276074	chr9	108263525	108263900	+	0	NA	intron (NM_011678, intron 4 of 21)	ORR1C2|LTR|MaLR	13550	NM_011678	22258	Mm.3974	NM_011678	ENSMUSG00000032612	Usp4	F730026I20Rik|Unp|mKIAA4155	ubiquitin specific peptidase 4 (proto-oncogene)	protein-coding
common_peak2-19762-25-38--0.423552313517143-0.564346534703877	chr1	78657841	78658755	+	0	NA	intron (NM_001136226, intron 2 of 3)	B1_Mus1|SINE|Alu	3283	NM_001136226	195434	Mm.276016	NM_001001981	ENSMUSG00000079470	Utp14b	4932411L21Rik|jsd	UTP14, U3 small nucleolar ribonucleoprotein, homolog B (yeast)	protein-coding
common_peak2-21625-50-58-0.158297267117111-0.413183870294151	chr11	101008532	101010009	+	0	NA	Intergenic	RSINE1|SINE|B4	-7928	NM_134028	103768	Mm.142348	NM_134028	ENSMUSG00000045007	Tubg2	AI504772|Tubgl	tubulin, gamma 2	protein-coding
unique_peak1-4365-8-3-1.00522241794757-1.39487600375387	chr2	156878622	156879105	+	0	NA	intron (NM_001164663, intron 3 of 14)	B1_Mus1|SINE|Alu	26138	NM_001164663	320706	Mm.79466	NM_001164663		Soga1	9830001H06Rik|AI426038|D430036N24Rik|Soga	suppressor of glucose, autophagy associated 1	protein-coding
unique_peak1-1548-12-1-2.64877598508764-3.36932189928148	chr13	23437398	23437920	+	0	NA	Intergenic	L1Md_F2|LINE|L1	23418	NM_001286156	218100	Mm.286454	NM_172586	ENSMUSG00000046351	Zfp322a	Znf322|Znf322a	zinc finger protein 322A	protein-coding
unique_peak1-5477-9-6-0.382258484346616-1.11707584880836	chr5	129847326	129847802	+	0	NA	Intergenic	Intergenic	-159542	NM_172276	231769	Mm.288714	NM_172276	ENSMUSG00000029439	Sfswap	1190005N23Rik|6330437E22Rik|AI197402|AW212079|SWAP|Sfrs8|Srsf8	splicing factor, suppressor of white-apricot homolog (Drosophila)	protein-coding
common_peak2-21450-91-119-0.166541349993819-0.520032025387926	chr11	86756649	86758653	+	0	NA	intron (NM_001005341, intron 4 of 4)	B4A|SINE|B4	49613	NM_001005341	77864	Mm.191894	NM_001005341	ENSMUSG00000018427	Ypel2	6430570G24|E130113K08Rik	yippee-like 2 (Drosophila)	protein-coding
common_peak1-8457-31-24-0.581382481038399-0.907273387067398	chr10	79984862	79985907	+	0	NA	intron (NM_026094, intron 25 of 27)	RMER15|LTR|ERVL	16485	NM_026094	67331	Mm.52511	NM_026094	ENSMUSG00000003341	Atp8b3	1700042F02Rik|1700056N23Rik|ATPIK|SAPLT	ATPase, class I, type 8B, member 3	protein-coding
unique_peak1-2525-9-4-0.867685311516858-1.36011389749466	chr16	20729780	20730302	+	0	NA	intron (NM_009379, intron 1 of 5)	intron (NM_009379, intron 1 of 5)	630	NM_001289896	21832	Mm.3943	NM_009379	ENSMUSG00000022847	Thpo	Mgdf|Ml|Mpllg|Tpo	thrombopoietin	protein-coding
common_peak2-21368-33-58--0.551305486836313-1.02303743263849	chr11	78245058	78246292	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	-9988	NM_022411	20500	Mm.274058	NM_022411	ENSMUSG00000001095	Slc13a2	Nadc1|mNaDC-1	solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2	protein-coding
common_peak2-22759-2-9--2.23938235115068-1.87199725847353	chr13	115089151	115089612	+	0	NA	intron (NM_010887, intron 4 of 4)	intron (NM_010887, intron 4 of 4)	88921	NM_010887	17993	Mm.253142	NM_010887	ENSMUSG00000021764	Ndufs4	6720411N02Rik|C1-18k	NADH dehydrogenase (ubiquinone) Fe-S protein 4	protein-coding
unique_peak2-39261-1-7--2.62705701021674-1.80617997398389	chr8	119574692	119575184	+	0	NA	exon (NM_029686, exon 16 of 43)	exon (NM_029686, exon 16 of 43)	31411	NM_029686	76645	Mm.159753	NM_029686	ENSMUSG00000034416	Pkd1l2	1700126L06Rik	polycystic kidney disease 1 like 2	protein-coding
common_peak2-23855-26-10-1.46846747352116-2.57346781069461	chr15	102150482	102150908	+	0	NA	intron (NM_001014976, intron 22 of 30)	intron (NM_001014976, intron 22 of 30)	-5852	NM_027044	56612	Mm.158264	NM_020031		Pfdn5	1190001O17Rik|1700010A06Rik|D15Ertd697e|Eig1|MM-1	prefoldin 5	protein-coding
unique_peak2-36310-14-11-0.314253659636488-0.435191258261915	chr2	76369873	76370539	+	0	NA	intron (NM_001290734, intron 3 of 24)	intron (NM_001290734, intron 3 of 24)	33143	NM_001290735	99031	Mm.240435	NM_145525	ENSMUSG00000042359	Osbpl6	1110062M20Rik|AI596402|ORP-6|mKIAA4128	oxysterol binding protein-like 6	protein-coding
common_peak2-29143-11-13--0.298661337805991-0.337263207250336	chr5	125404963	125405600	+	0	NA	Intergenic	Intergenic	62206	NM_001081750	269704	Mm.138617	NM_001081750	ENSMUSG00000079215	Zfp664	AW060232|D930038J03Rik|ZFOC1|Znf664	zinc finger protein 664	protein-coding
common_peak1-14565-23-37--0.526160008934505-0.720235944639228	chr3	37312373	37313287	+	0	NA	intron (NM_001291044, intron 2 of 4)	intron (NM_001291044, intron 2 of 4)	5688	NM_001291044	229228	Mm.436967	NM_153561	ENSMUSG00000050174	Nudt6	Asfgf2b	nudix (nucleoside diphosphate linked moiety X)-type motif 6	protein-coding
unique_peak2-36757-1-5--2.2120195109379-1.32905871926422	chr3	63241282	63241689	+	0	NA	Intergenic	Intergenic	141468	NM_001289463	17380	Mm.296022	NM_008604	ENSMUSG00000027820	Mme	6030454K05Rik|C85356|CALLA|CD10|NEP|SFE	membrane metallo endopeptidase	protein-coding
common_peak2-23749-2-5--1.50241675698448-1.08602067057793	chr15	97825200	97825572	+	0	NA	intron (NM_001113515, intron 12 of 52)	intron (NM_001113515, intron 12 of 52)	9769	NM_031163	12824	Mm.2423	NM_031163	ENSMUSG00000022483	Col2a1	Col2|Col2a|Col2a-1|Del1|Dmm|Lpk|M100856|Rgsc856	collagen, type II, alpha 1	protein-coding
common_peak2-20044-34-40-0.0245165223831822-0.311623594475992	chr1	143701904	143702961	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-1149453	NR_040604	75910	Mm.483845	NR_040604		4930590L20Rik	-	RIKEN cDNA 4930590L20 gene	ncRNA
unique_peak1-6303-7-2-1.21412832957703-1.45399745587252	chr7	35141742	35142267	+	0	NA	intron (NM_025948, intron 6 of 10)	intron (NM_025948, intron 6 of 10)	32555	NM_025948	67070	Mm.276503	NM_025948	ENSMUSG00000066568	Lsm14a	2700023B17Rik|AA407828|AU017544|Tral	LSM14 homolog A (SCD6, S. cerevisiae)	protein-coding
common_peak1-16427-23-18-0.473839991065495-0.618644178587689	chr5	131814534	131815223	+	0	NA	Intergenic	RSINE1|SINE|B4	-31486	NM_145218	212996	Mm.299204	NM_145218		Wbscr17	AA388321|E330012B09Rik	Williams-Beuren syndrome chromosome region 17 homolog (human)	protein-coding
common_peak2-27684-12-14--0.25811461052088-0.309074325783021	chr3	117073841	117074479	+	0	NA	Intergenic	Intergenic	-10366	NM_177664	229791	Mm.140138	NM_177664	ENSMUSG00000044667	Lppr4	A330086D10|D3Bwg0562e|PRG-1|mKIAA0455	lipid phosphate phosphatase-related protein type 4	protein-coding
unique_peak1-2339-8-2-1.42025991722641-1.65811743852845	chr15	84711355	84711923	+	0	NA	Intergenic	B4|SINE|B4	-25080	NR_030731	271305	Mm.101022	NM_001081166	ENSMUSG00000016624	Phf21b	A730032D07Rik	PHD finger protein 21B	protein-coding
common_peak2-23595-5-7--0.704380336005853-1.01466476204226	chr15	80233286	80233679	+	0	NA	Intergenic	Intergenic	115814	NM_001044308	239556	Mm.291058	NM_001044308	ENSMUSG00000022416	Cacna1i	Ca(V)3.3	calcium channel, voltage-dependent, alpha 1I subunit	protein-coding
common_peak2-30723-34-71--0.787856474441046-1.9353683478336	chr7	114116657	114117805	+	0	NA	intron (NM_147035, intron 2 of 2)	intron (NM_147035, intron 2 of 2)	1734	NM_147035	259037	Mm.223420	NM_147035	ENSMUSG00000045013	Olfr711	MOR103-4	olfactory receptor 711	protein-coding
common_peak1-8287-46-87--0.561435675388496-1.38404115112576	chr10	29361320	29362524	+	0	NA	Intergenic	Intergenic	-106249	NM_028351	72780	Mm.45191	NM_028351	ENSMUSG00000019880	Rspo3	2810459H04Rik|AW742308|Cristin1|Thsd2	R-spondin 3 homolog (Xenopus laevis)	protein-coding
unique_peak1-4146-8-2-1.42025991722641-1.65811743852845	chr2	93886001	93886484	+	0	NA	intron (NM_019657, intron 7 of 10)	intron (NM_019657, intron 7 of 10)	-35355	NM_026944	69113	Mm.272498	NM_026944	ENSMUSG00000040174	Alkbh3	1700108H04Rik|1810020C19Rik|Abh3|mABH3	alkB, alkylation repair homolog 3 (E. coli)	protein-coding
common_peak1-7598-40-25-0.958535964610006-2.27205585058211	chr1	58029598	58030995	+	0	NA	Intergenic	Intergenic	-3368	NM_001159865	51960	Mm.339711	NM_030211	ENSMUSG00000054770	Kctd18	4932411A20Rik|6530404F10Rik	potassium channel tetramerisation domain containing 18	protein-coding
common_peak1-12262-10-8-0.186490343566457-1.078512453669	chr17	37028509	37029245	+	0	NA	Intergenic	Intergenic	-1807	NM_001172168	195359	Mm.32606	NM_001033235	ENSMUSG00000073399	Trim40	Gm319|Gm35|Gm865	tripartite motif-containing 40	protein-coding
common_peak1-19087-9-15--0.81038659359578-0.630231561310125	chr9	70863618	70864152	+	0	NA	Intergenic	Intergenic	-81270	NM_008280	15450	Mm.390187	NM_008280	ENSMUSG00000032207	Lipc	AI256194|HL|Hpl	lipase, hepatic	protein-coding
unique_peak1-52-10-3-1.35641534500877-1.75805390616669	chr1	31057874	31058531	+	0	NA	Intergenic	MT2B|LTR|ERVL	-51602	NM_011200	19243	Mm.491181	NM_011200	ENSMUSG00000026064	Ptp4a1	AA415290|AU019864|C130021B01|Prl-1	protein tyrosine phosphatase 4a1	protein-coding
common_peak2-32336-17-30--0.735899972181837-0.841847921495509	chrX	74328715	74329289	+	0	NA	Intergenic	Intergenic	-427564	NM_020601	21372	Mm.258476	NM_020601	ENSMUSG00000025246	Tbl1x	5330429M20|Tbl1	transducin (beta)-like 1 X-linked	protein-coding
common_peak2-22404-10-25--1.34402437313232-1.74319850844462	chr13	34002204	34002830	+	0	NA	Intergenic	Intergenic	-4940	NM_148942	97848	Mm.272188	NM_148942	ENSMUSG00000052180	Serpinb6c	C76171|C76174|SPI3C|SPIC|ovalbumin	serine (or cysteine) peptidase inhibitor, clade B, member 6c	protein-coding
unique_peak1-1228-9-1-2.18961340640422-2.31132995230379	chr11	110405502	110406030	+	0	NA	Intergenic	Intergenic	145330	NM_011943	26399	Mm.14487	NM_011943	ENSMUSG00000020623	Map2k6	MEK6|MKK6|Prkmk6|SAPKK3	mitogen-activated protein kinase kinase 6	protein-coding
common_peak1-16691-72-84-0.259192876734616-0.679879113545623	chr6	15720408	15722138	+	0	NA	intron (NM_175088, intron 4 of 4)	intron (NM_175088, intron 4 of 4)	50612	NM_175088	16543	Mm.1314	NM_175088	ENSMUSG00000041390	Mdfic	Kdt1|Mdfid	MyoD family inhibitor domain containing	protein-coding
unique_peak1-1737-7-10--0.660340788339108-1.12966497611638	chr13	101478888	101479384	+	0	NA	intron (NM_009874, intron 9 of 11)	(GA)n|Simple_repeat|Simple_repeat	21761	NM_009874	12572	Mm.259718	NM_009874	ENSMUSG00000069089	Cdk7	AI323415|AI528512|C230069N13|Cdkn7|Crk4	cyclin-dependent kinase 7	protein-coding
unique_peak2-37415-3-7--1.41398308995928-1.23214870625617	chr4	147940860	147941275	+	0	NA	intron (NM_016699, intron 11 of 24)	B1_Mur3|SINE|Alu	8531	NM_016699	50912	Mm.266635	NM_016699	ENSMUSG00000017264	Exosc10	PM-Scl|PM/Scl-100|Pmscl2|RRP6|p2|p3|p4	exosome component 10	protein-coding
unique_peak2-34536-3-9--1.73591118484664-1.57096726280955	chr14	55591246	55591558	+	0	NA	intron (NM_080728, intron 38 of 40)	intron (NM_080728, intron 38 of 40)	3211	NR_030607	100124433		NR_030607		Mir208b	Mirn208b	microRNA 208b	ncRNA
common_peak1-7906-8-9--0.316705676939792-1.03275496310833	chr1	135845294	135845809	+	0	NA	Intergenic	L1MA4A|LINE|L1	-27573	NM_054077	116847	Mm.214514	NM_054077	ENSMUSG00000041577	Prelp	7330409J17Rik|SLRR2A	proline arginine-rich end leucine-rich repeat	protein-coding
common_peak1-16421-11-9-0.186765489364251-0.344532117358383	chr5	129887559	129888064	+	0	NA	Intergenic	Intergenic	-119295	NM_172276	231769	Mm.288714	NM_172276	ENSMUSG00000029439	Sfswap	1190005N23Rik|6330437E22Rik|AI197402|AW212079|SWAP|Sfrs8|Srsf8	splicing factor, suppressor of white-apricot homolog (Drosophila)	protein-coding
common_peak2-23707-20-24--0.155781405183531-0.319918318021793	chr15	89177152	89177999	+	0	NA	Intergenic	MLT1D|LTR|MaLR	8515	NM_178919	105847	Mm.34511	NM_178919	ENSMUSG00000022614	Lmf2	AI451006|Tmem112b|Tmem153	lipase maturation factor 2	protein-coding
common_peak2-30536-10-26--1.3984721571547-1.90052685918624	chr7	67951858	67952392	+	0	NA	Intergenic	Intergenic	-667020	NM_001082962	20646	Mm.274995	NM_013670	ENSMUSG00000000948	Snrpn	2410045I01Rik|HCERN3|Peg4|Pwcr1|SMN	small nuclear ribonucleoprotein N	protein-coding
common_peak2-20566-9-10--0.269818212233077-1.05503135781948	chr10	75677750	75678244	+	0	NA	intron (NM_001077638, intron 7 of 10)	ORR1D2-int|LTR|MaLR	-7843	NR_030443	751554		NR_030443	miRBase:MI0004635	Mir678	Mirn678|mmu-mir-678	microRNA 678	ncRNA
common_peak2-31275-18-28--0.54506184389922-0.591915184368642	chr8	71700439	71701266	+	0	NA	Intergenic	Intergenic	-32093	NM_001013379	234358	Mm.334577	NM_001013379		Zfp930	-	zinc finger protein 930	protein-coding
common_peak1-12386-6-13--1.2419568116773-1.58711810488664	chr17	67354643	67355122	+	0	NA	intron (NM_008984, intron 7 of 30)	IAPEz-int|LTR|ERVK	20693	NR_049205	100885844		NR_049205		Mir5709	mmu-mir-5709	microRNA mir-5709	ncRNA
common_peak2-20757-45-93--0.694230826332766-2.0787781418229	chr10	115383912	115385992	+	0	NA	Intergenic	Intergenic	-70467	NM_011217	19279	Mm.336316	NM_011217	ENSMUSG00000020151	Ptprr	Gmcp1|PTP-SL|PTPBR7|RPTPRR|mPTP213	protein tyrosine phosphatase, receptor type, R	protein-coding
common_peak1-13781-21-23--0.0154732354549205-0.305650498375555	chr2	37452160	37452974	+	0	NA	intron (NM_009261, intron 13 of 16)	B3|SINE|B2	50238	NM_009261	20744	Mm.237095	NM_009261	ENSMUSG00000026915	Strbp	6430510M02Rik|AI852513|C230082I21Rik|C86322|Spnr	spermatid perinuclear RNA binding protein	protein-coding
common_peak1-11274-28-54--0.728400593703197-1.41268768702114	chr15	81810756	81812029	+	0	NA	exon (NM_025503, exon 1 of 1)	exon (NM_025503, exon 1 of 1)	422	NM_025503	66346	Mm.54292	NM_025503	ENSMUSG00000061633	1700029P11Rik	-	RIKEN cDNA 1700029P11 gene	protein-coding
common_peak1-11123-25-18-0.613922391901521-0.86528749982161	chr15	64223494	64224460	+	0	NA	Intergenic	Intergenic	-9496	NM_010026	13196	Mm.277236	NM_010026	ENSMUSG00000022377	Asap1	AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19	ArfGAP with SH3 domain, ankyrin repeat and PH domain1	protein-coding
common_peak1-10587-40-52--0.0689447718121006-0.303138254425616	chr14	29978136	29979257	+	0	NA	intron (NM_009785, intron 13 of 37)	intron (NM_009785, intron 13 of 37)	147302	NM_176920	319476	Mm.95780	NM_176920	ENSMUSG00000045776	Lrtm1	A930016D02Rik	leucine-rich repeats and transmembrane domains 1	protein-coding
unique_peak2-37746-5-6--0.511735258063458-0.947717972411649	chr5	110808125	110808472	+	0	NA	exon (NM_001142642, exon 7 of 19)	exon (NM_001142642, exon 7 of 19)	7848	NM_028596	381668	Mm.348782	NM_028596	ENSMUSG00000043323	Fbrsl1	2410025L10Rik|AI467568|Gm1049|mKIAA1545	fibrosin-like 1	protein-coding
common_peak1-16163-46-47-0.313033442527646-0.644849665389898	chr5	81021224	81023103	+	0	NA	Intergenic	Intergenic	-428455	NM_198702	319387	Mm.273631	NM_198702	ENSMUSG00000037605	Lphn3	5430402I23Rik|CIRL-3|D130075K09Rik|Gm1379|LEC3|mKIAA0768	latrophilin 3	protein-coding
unique_peak2-38124-3-7--1.41398308995928-1.23214870625617	chr6	83077816	83078199	+	0	NA	Intergenic	ID_B1|SINE|B4	-2984	NM_023547	70020	Mm.27814	NM_023547	ENSMUSG00000030034	Ino80b	2510009I23Rik|HMG1YL4|Hmga1l4|Papa1|Znhit4	INO80 complex subunit B	protein-coding
common_peak1-16731-19-13-0.595332404604082-0.713635438203849	chr6	31074759	31075751	+	0	NA	intron (NR_110471, intron 3 of 3)	MER20B|DNA|MER1_type	-62162	NR_029532	387223		NR_029532	miRBase:MI0000143	Mir29b-1	Mirn29b|Mirn29b-1	microRNA 29b-1	ncRNA
common_peak2-28995-28-30-0.0987628094345876-0.332062764479303	chr5	108065473	108066520	+	0	NA	intron (NM_144911, intron 11 of 12)	intron (NM_144911, intron 11 of 12)	-3127	NR_046195	78443	Mm.490703	NR_046195	ENSMUSG00000085900	A930041C12Rik	-	RIKEN cDNA A930041C12 gene	ncRNA
unique_peak2-36993-2-6--1.72480917832092-1.26211192963361	chr3	121565164	121565426	+	0	NA	Intergenic	Intergenic	-47162	NM_008991	19299	Mm.399042	NM_008991	ENSMUSG00000028127	Abcd3	AI313901|AU018866|AW146054|PMP68|PMP70|Pxmp1	ATP-binding cassette, sub-family D (ALD), member 3	protein-coding
common_peak2-22484-18-20--0.0793982715504091-0.301029995663976	chr13	49298233	49298944	+	0	NA	exon (NM_026738, exon 6 of 6)	exon (NM_026738, exon 6 of 6)	12807	NM_026738	68480	Mm.3336	NM_026738	ENSMUSG00000037960	1110007C09Rik	AI851695|Bincard	RIKEN cDNA 1110007C09 gene	protein-coding
common_peak2-22712-9-7-0.18961340640422-1.05908390183068	chr13	102895996	102896367	+	0	NA	Intergenic	Intergenic	-358009	NM_001077495	18708	Mm.259333	NM_001024955	ENSMUSG00000041417	Pik3r1	PI3K|p50alpha|p55alpha|p85alpha	phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)	protein-coding
unique_peak2-38219-2-4--1.23938235115068-0.931118710592187	chr6	115005302	115005688	+	0	NA	Intergenic	Intergenic	-17603	NM_026894	68971	Mm.24937	NM_026894	ENSMUSG00000030316	Tamm41	1500001M20Rik|TAM41	TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)	protein-coding
common_peak2-22961-16-11-0.533301141546906-0.58239619684445	chr14	52244640	52245063	+	0	NA	intron (NM_001013816, intron 1 of 4)	L1Md_F2|LINE|L1	72386	NM_001013816	434459	Mm.359230	NM_001013816	ENSMUSG00000079244	Gm5622	EG434459	predicted gene 5622	protein-coding
unique_peak1-3353-15-6-1.20480982849805-1.32521814697968	chr19	29474532	29475395	+	0	NA	Intergenic	Intergenic	-10446	NM_021396	58205	Mm.116737	NM_021396		Pdcd1lg2	B7-DC|Btdc|F730015O22Rik|PD-L2	programmed cell death 1 ligand 2	protein-coding
common_peak2-24660-126-192-0.0452031626837446-0.328244275109754	chr17	35915587	35918268	+	0	NA	intron (NR_045459, intron 2 of 2)	intron (NR_045459, intron 2 of 2)	7532	NR_045459	74601	Mm.410840	NR_045459	ENSMUSG00000092171	4833427F10Rik	-	RIKEN cDNA 4833427F10 gene	ncRNA
unique_peak2-34503-7-6--0.00826409175941478-0.97990265578305	chr14	46924823	46925256	+	0	NA	Intergenic	Intergenic	-74160	NR_037981	100041724	Mm.383311	NM_001099324	ENSMUSG00000079261	Gm15217	OTTMUSG00000019524	predicted gene 15217	ncRNA
common_peak2-29618-11-7-0.508693584251613-1.21681515183528	chr6	54200354	54200817	+	0	NA	intron (NM_001163640, intron 6 of 12)	B3A|SINE|B2	-22231	NM_023543	69993	Mm.321147	NM_023543	ENSMUSG00000004633	Chn2	1700026N20Rik|4930557O16Rik|ARHGAP3|Bch	chimerin 2	protein-coding
common_peak1-8910-107-137-0.245522475895227-0.827652297025708	chr11	50430223	50431678	+	0	NA	intron (NM_175643, intron 2 of 21)	intron (NM_175643, intron 2 of 21)	15363	NM_175643	216725	Mm.110597	NM_175643	ENSMUSG00000036545	Adamts2	ADAM-TS2|ADAMTS-2|ADAMTS-3|PCINP|hPCPNI|mKIAA4060|pNPI	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 2	protein-coding
common_peak1-14527-53-46-0.586384160738291-1.46999668045562	chr3	28805289	28806160	+	0	NA	intron (NM_001033479, intron 6 of 14)	Lx3_Mus|LINE|L1	14185	NM_001033479	385263	Mm.60893	NM_001033479	ENSMUSG00000074655	Gm1527	Gm1136	predicted gene 1527	protein-coding
unique_peak1-533-12-6-0.841421063030034-1.58711810488664	chr1	186116591	186117095	+	0	NA	Intergenic	B1_Mm|SINE|Alu	258503	NM_022019	63953	Mm.404024	NM_022019	ENSMUSG00000039384	Dusp10	2610306G15Rik|AI158871|MKP-5|MKP5	dual specificity phosphatase 10	protein-coding
common_peak1-15728-22-57--1.21069689004017-3.08612073477863	chr4	143161326	143162278	+	0	NA	exon (NM_001007579, exon 3 of 4)	exon (NM_001007579, exon 3 of 4)	4432	NM_001007579	329986	Mm.453523	NM_001007579	ENSMUSG00000070618	BC080695	-	cDNA sequence BC080695	protein-coding
common_peak1-9138-33-35-0.161412561083217-0.373466121463208	chr11	75651156	75652213	+	0	NA	intron (NM_029548, intron 5 of 7)	intron (NM_029548, intron 5 of 7)	-42125	NM_007873	13447	Mm.5137	NM_007873	ENSMUSG00000020848	Doc2b	-	double C2, beta	protein-coding
common_peak1-7678-33-20-0.939020139746768-1.77675427888235	chr1	77538814	77540321	+	0	NA	Intergenic	Intergenic	-27904	NM_007936	13838	Mm.400747	NM_007936	ENSMUSG00000026235	Epha4	2900005C20Rik|AI385584|Cek8|Hek8|Sek|Sek1|Tyro1|rb	Eph receptor A4	protein-coding
common_peak1-16567-11-8-0.338768582809301-1.14218153353838	chr5	146678737	146679225	+	0	NA	intron (NM_007818, intron 7 of 12)	L1MB8|LINE|L1	12449	NM_007818	13112	Mm.332844	NM_007818	ENSMUSG00000056035	Cyp3a11	AI256190|Cyp3a|IIIAm1|Pcn	cytochrome P450, family 3, subfamily a, polypeptide 11	protein-coding
unique_peak2-37737-5-7--0.704380336005853-1.01466476204226	chr5	110094913	110095286	+	0	NA	Intergenic	RLTR22_Mus|LTR|ERVK	-107087	NM_001164735	57914	Mm.35771	NM_016715	ENSMUSG00000033467	Crlf2	CRLM2|Ly114|Tpte2|Tslpr	cytokine receptor-like factor 2	protein-coding
unique_peak2-33946-4-7--1.02346051385325-1.09384600808989	chr12	76004459	76004839	+	0	NA	intron (NM_172805, intron 10 of 10)	intron (NM_172805, intron 10 of 10)	273670	NM_172805	238271	Mm.44465	NM_172805	ENSMUSG00000034402	Kcnh5	Eag2	potassium voltage-gated channel, subfamily H (eag-related), member 5	protein-coding
common_peak1-7977-11-12--0.191746133889479-0.310474156842889	chr1	157560739	157561310	+	0	NA	intron (NM_010712, intron 2 of 5)	intron (NM_010712, intron 2 of 5)	28133	NM_010712	16872	Mm.103624	NM_010712	ENSMUSG00000026468	Lhx4	A330062J17Rik|Gsh-4|Gsh4	LIM homeobox protein 4	protein-coding
common_peak1-13441-43-54-0.0012034719990428-0.303022200133692	chr19	55740486	55741918	+	0	NA	intron (NR_045318, intron 2 of 3)	MTE2a|LTR|MaLR	35492	NR_045318	77594	Mm.329924	NR_045318	ENSMUSG00000097632	4930552P12Rik	-	RIKEN cDNA 4930552P12 gene	ncRNA
common_peak2-31469-45-57-0.00237703021729985-0.30291825633885	chr8	105965346	105966251	+	0	NA	Intergenic	Intergenic	-94364	NR_036588	69794	Mm.396139	NR_036588		1600027J07Rik	-	RIKEN cDNA 1600027J07 gene	ncRNA
common_peak2-20768-13-20--0.613845392140992-0.532159081577619	chr10	116949570	116950483	+	0	NA	Intergenic	Intergenic	-116530	NM_027468	70574	Mm.339332	NM_027468	ENSMUSG00000020183	Cpm	1110060I01Rik|5730456K23Rik|AA589379|E030045M14Rik	carboxypeptidase M	protein-coding
common_peak2-30466-11-6-0.701338662194009-1.32595962126035	chr7	46761143	46761566	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-11782	NM_001004139	70227	Mm.333800	NM_001004139	ENSMUSG00000068959	Zfp619	3000002G13Rik	zinc finger protein 619	protein-coding
common_peak2-25793-29-20-0.71997265783635-1.20071330053879	chr19	36832929	36833521	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-22131	NM_016854	53412	Mm.24724	NM_016854	ENSMUSG00000067279	Ppp1r3c	PTG|Ppp1r5	protein phosphatase 1, regulatory (inhibitor) subunit 3C	protein-coding
unique_peak1-2399-12-2-2.06381348436648-2.79529063155376	chr15	98155853	98156442	+	0	NA	Intergenic	Intergenic	-12168	NM_001011778	257943	Mm.309892	NM_001011778	ENSMUSG00000062037	Olfr285	MOR160-3	olfactory receptor 285	protein-coding
common_peak1-8179-12-30--1.30542032529924-1.80107744087172	chr10	43220866	43221391	+	0	NA	intron (NM_199028, intron 3 of 3)	intron (NM_199028, intron 3 of 3)	22182	NM_199028	331623	Mm.490388	NM_199028	ENSMUSG00000038214	Bend3	mKIAA1553	BEN domain containing 3	protein-coding
unique_peak1-5349-11-4-1.18676548936425-1.68134727924692	chr5	91654885	91655486	+	0	NA	Intergenic	Intergenic	56917	NR_040428	100503265	Mm.125059	NR_040428		Gm19619	-	predicted gene, 19619	ncRNA
common_peak2-25926-74-85-0.289621822276509-0.759030078841272	chr19	46500133	46502569	+	0	NA	intron (NM_001025391, intron 3 of 11)	intron (NM_001025391, intron 3 of 11)	29965	NM_015752	24069	Mm.41210	NM_015752	ENSMUSG00000025231	Sufu	Su(fu)	suppressor of fused homolog (Drosophila)	protein-coding
common_peak1-11081-14-11-0.314253659636488-0.435191258261915	chr15	59151234	59151835	+	0	NA	intron (NM_009270, intron 2 of 10)	intron (NM_009270, intron 2 of 10)	4887	NM_009270	20775	Mm.296169	NM_009270	ENSMUSG00000022351	Sqle	AI323792	squalene epoxidase	protein-coding
common_peak1-8202-7-4-0.477162735410827-1.09384600808989	chr10	4611360	4611786	+	0	NA	Intergenic	Intergenic	70497	NM_025995	67141	Mm.197520	NM_025995	ENSMUSG00000019773	Fbxo5	2510044I10Rik|C85305|Emi1|Fbxo31	F-box protein 5	protein-coding
common_peak1-15505-14-58--1.9834268890042-6.17384340282693	chr4	116220978	116221794	+	0	NA	Intergenic	MT2_Mm|LTR|ERVL	7162	NM_177670	230657	Mm.291484	NM_177670		Tmem69	A630048M13Rik	transmembrane protein 69	protein-coding
common_peak2-20895-17-26--0.53659116395843-0.538442145997695	chr11	4135092	4135828	+	0	NA	Intergenic	Intergenic	-1328	NM_001013365	18413	Mm.131422	NM_001013365	ENSMUSG00000058755	Osm	OncoM	oncostatin M	protein-coding
common_peak1-14041-63-31-1.43831259107059-6.31088010857318	chr2	118539886	118541617	+	0	NA	intron (NM_177568, intron 18 of 31)	intron (NM_177568, intron 18 of 31)	-11052	NM_001081971	383787	Mm.35758	NM_001081971	ENSMUSG00000078137	Ankrd63	Gm1337	ankyrin repeat domain 63	protein-coding
common_peak1-7607-19-24--0.241168863113038-0.344491671143527	chr1	58713004	58713936	+	0	NA	TTS (NR_045007)	TTS (NR_045007)	3985	NR_045007	100504501	Mm.440933	NR_045007		Gm20257	-	caspase 8 pseudogene	pseudo
common_peak1-13741-10-6-0.549060422951165-1.21398586181642	chr2	32527501	32528005	+	0	NA	exon (NM_001146348, exon 5 of 15)	exon (NM_001146348, exon 5 of 15)	15533	NR_106168	102465885		NR_106168		Mir8093	mmu-mir-8093	microRNA mir-8093	ncRNA
unique_peak1-1762-9-1-2.18961340640422-2.31132995230379	chr13	109645250	109645778	+	0	NA	intron (NM_011056, intron 1 of 16)	intron (NM_011056, intron 1 of 16)	201143	NM_011056	238871	Mm.434429	NM_011056		Pde4d	9630011N22Rik|Dpde3	phosphodiesterase 4D, cAMP specific	protein-coding
unique_peak2-33018-9-23--1.39534909431694-1.67711336403294	chr10	68007147	68008077	+	0	NA	Intergenic	MTD|LTR|MaLR	-2989	NM_028491	73287	Mm.141830	NM_028491	ENSMUSG00000019945	1700040L02Rik	-	RIKEN cDNA 1700040L02 gene	protein-coding
common_peak1-9083-35-25-0.730930540321412-1.34810744351377	chr11	69685434	69686488	+	0	NA	Intergenic	Intergenic	5559	NM_001195710	100503361	Mm.340490	NM_001195710	ENSMUSG00000094845	Tmem95	432576	transmembrane protein 95	protein-coding
common_peak1-16046-51-54-0.293564112077913-0.604904474110885	chr5	38259657	38260983	+	0	NA	Intergenic	B3A|SINE|B2	-44496	NM_010835	17701	Mm.256509	NM_010835	ENSMUSG00000048450	Msx1	AA675338|AI324650|Hox-7|Hox7|Hox7.1|msh	msh homeobox 1	protein-coding
common_peak1-14398-20-12-0.787635066450101-0.949240599462708	chr2	173256099	173256874	+	0	NA	Intergenic	RMER15|LTR|ERVL	-91607	NM_028158	72221	Mm.46132	NM_028158	ENSMUSG00000027518	1700021F07Rik	-	RIKEN cDNA 1700021F07 gene	protein-coding
common_peak1-12276-7-11--0.785871670422967-1.21681515183528	chr17	44491300	44491820	+	0	NA	Intergenic	Intergenic	166039	NM_172621	224796	Mm.37666	NM_172621	ENSMUSG00000023959	Clic5	5730531E12Rik|B330005L24|Gm322|jbg	chloride intracellular channel 5	protein-coding
common_peak2-20600-31-25-0.524798952672032-0.808568985218824	chr10	79853695	79854389	+	0	NA	Intergenic	Intergenic	-3646	NM_198615	237400	Mm.268389	NM_198615	ENSMUSG00000048696	Mex3d	BC059858|Rkhd1	mex3 homolog D (C. elegans)	protein-coding
unique_peak2-39588-2-15--2.91745425626332-3.28500101358144	chr9	76015786	76016651	+	0	NA	intron (NM_205844, intron 6 of 8)	intron (NM_205844, intron 6 of 8)	45246	NM_205844	404194	Mm.213862	NM_205844	ENSMUSG00000059383	Gfral	AY457637|Gral	GDNF family receptor alpha like	protein-coding
common_peak2-23567-26-17-0.75797409071615-1.09210977391291	chr15	79389875	79390581	+	0	NA	Intergenic	RMER6A|LTR|ERVK	-13057	NM_199080	67040	Mm.29644	NM_152806	ENSMUSG00000055065	Ddx17	2610007K22Rik|A430025E01Rik|AI047725|C80929|Gm926|p72	DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	protein-coding
common_peak2-26355-16-22--0.405298313788951-0.440610794044987	chr2	37452193	37452777	+	0	NA	intron (NM_009261, intron 13 of 16)	B3|SINE|B2	50320	NM_009261	20744	Mm.237095	NM_009261	ENSMUSG00000026915	Strbp	6430510M02Rik|AI852513|C230082I21Rik|C86322|Spnr	spermatid perinuclear RNA binding protein	protein-coding
common_peak1-10450-61-33-1.295286488499-5.1378244255477	chr13	107675824	107677754	+	0	NA	exon (NM_029665, exon 13 of 30)	exon (NM_029665, exon 13 of 30)	50206	NM_029665	76582	Mm.132208	NM_029665	ENSMUSG00000042590	Ipo11	1700081H05Rik|2510001A17Rik|AI314624|AW555235|E330021B14Rik|Ranbp11	importin 11	protein-coding
unique_peak2-37538-4-5--0.608423014574403-0.909929411522249	chr5	29309187	29309491	+	0	NA	Intergenic	Intergenic	-213194	NM_021470	56874	Mm.87352	NM_021470	ENSMUSG00000029130	Rnf32	1700009J01Rik|2700025B22Rik|4930542N22Rik|Lmbr2	ring finger protein 32	protein-coding
common_peak2-23049-18-8-1.14299414978604-1.45476480588849	chr14	70095553	70095969	+	0	NA	TTS (NM_033325)	TTS (NM_033325)	3706	NR_105915	102465573		NR_105915		Mir6950	mmu-mir-6950	microRNA mir-6950	ncRNA
unique_peak2-36059-4-7--1.02346051385325-1.09384600808989	chr19	47867584	47868018	+	0	NA	intron (NM_027559, intron 11 of 37)	B1_Mus1|SINE|Alu	44050	NM_027559	100048534	Mm.29457	NM_027559	ENSMUSG00000044948	Cfap43	4632415N18Rik|4930428C11Rik|4930463G05Rik|AI429486|D19Ertd652e|Wdr96	cilia and flagella associated protein 43	protein-coding
common_peak2-21749-39-17-1.44583624547684-3.81634954855125	chr11	115954208	115955296	+	0	NA	Intergenic	B3A|SINE|B2	-6474	NM_016852	22378	Mm.284792	NM_016852	ENSMUSG00000034341	Wbp2	-	WW domain binding protein 2	protein-coding
unique_peak2-38209-2-6--1.72480917832092-1.26211192963361	chr6	113430495	113430889	+	0	NA	intron (NM_134159, intron 13 of 16)	intron (NM_134159, intron 13 of 16)	-2871	NM_133930	171508	Mm.41593	NM_133930	ENSMUSG00000030284	Creld1	AI843811	cysteine-rich with EGF-like domains 1	protein-coding
unique_peak2-34326-3-8--1.58390809140159-1.39487600375387	chr13	97406584	97406977	+	0	NA	intron (NM_023420, intron 17 of 17)	intron (NM_023420, intron 17 of 17)	34111	NM_008255	15357	Mm.316652	NM_008255	ENSMUSG00000021670	Hmgcr	HMG-CoAR|Red	3-hydroxy-3-methylglutaryl-Coenzyme A reductase	protein-coding
common_peak1-19317-19-25--0.297752391479405-0.376654945067947	chr9	123136613	123137308	+	0	NA	Intergenic	Intergenic	-11804	NM_133974	109332	Mm.27519	NM_133974	ENSMUSG00000035498	Cdcp1	9030022E12Rik|AA409659|E030027H19Rik	CUB domain containing protein 1	protein-coding
unique_peak1-5985-23-6-1.91441258245148-3.22740510021752	chr6	98797188	98798161	+	0	NA	Intergenic	Intergenic	180618	NM_001197322	108655	Mm.234965	NM_053202	ENSMUSG00000030067	Foxp1	3110052D19Rik|4932443N09Rik|AI461938|AW494214	forkhead box P1	protein-coding
unique_peak2-33648-6-6--0.241956811677302-0.947717972411649	chr11	99043003	99043467	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	-26844	NM_007719	12775	Mm.2932	NM_007719	ENSMUSG00000037944	Ccr7	CD197|Cdw197|Cmkbr7|EBI1|Ebi1h	chemokine (C-C motif) receptor 7	protein-coding
common_peak1-17822-24-17-0.623284901325404-0.890873221665474	chr7	105395381	105396426	+	0	NA	intron (NM_025408, intron 6 of 10)	Lx9|LINE|L1	-47918	NM_001081167	272411	Mm.98333	NM_001081167	ENSMUSG00000074004	B3gnt6	BC039789|Core-3|Core3	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 (core 3 synthase)	protein-coding
common_peak2-25118-8-9--0.316705676939792-1.03275496310833	chr18	38366897	38367361	+	0	NA	intron (NM_029357, intron 1 of 2)	intron (NM_029357, intron 1 of 2)	2287	NM_029357	75599	Mm.36560	NM_029357	ENSMUSG00000051375	Pcdh1	2010005A06Rik|AI585920	protocadherin 1	protein-coding
unique_peak2-37483-3-6--1.22133801201688-1.08602067057793	chr5	4788064	4788360	+	0	NA	Intergenic	MLT1F1-int|LTR|MaLR	-29996	NM_021457	14362	Mm.246003	NM_021457	ENSMUSG00000044674	Fzd1	AW227548|FZ-1|Fz1	frizzled homolog 1 (Drosophila)	protein-coding
common_peak1-14682-23-47--0.863194996212076-1.63155726056134	chr3	63976136	63977035	+	0	NA	Intergenic	(CAGAG)n|Simple_repeat|Simple_repeat	-35183	NM_001104592	100125586	Mm.469888	NM_001104592	ENSMUSG00000043897	Vmn2r2	ENSMUSG00000043897	vomeronasal 2, receptor 2	protein-coding
common_peak1-11652-15-18--0.235762762887929-0.326591483156968	chr16	23272654	23273212	+	0	NA	intron (NM_145933, intron 2 of 7)	intron (NM_145933, intron 2 of 7)	-17610	NM_001252506	20440	Mm.149029	NM_145933	ENSMUSG00000022885	St6gal1	AW742324|Siat1|St6Gal-I|St6gal|St6galI	beta galactoside alpha 2,6 sialyltransferase 1	protein-coding
common_peak1-17237-16-5-1.53330114154691-1.80287260729378	chr6	128285637	128286487	+	0	NA	intron (NM_011657, intron 2 of 10)	B4|SINE|B4	19807	NM_011657	22158	Mm.291783	NM_011657	ENSMUSG00000001521	Tulp3	2310022L06Rik|AI316887	tubby-like protein 3	protein-coding
unique_peak2-36194-2-13--2.72480917832092-2.79529063155376	chr2	32174115	32174705	+	0	NA	TTS (NR_029811)	TTS (NR_029811)	430	NR_029811	387239		NR_029811	miRBase:MI0000714	Mir199b	Mirn199b	microRNA 199b	ncRNA
unique_peak2-35421-2-5--1.50241675698448-1.08602067057793	chr17	34041160	34041593	+	0	NA	promoter-TSS (NR_040470)	promoter-TSS (NR_040470)	-704	NR_040470	474160	Mm.206186	NR_040470	ENSMUSG00000092349	BC033916	-	cDNA sequence BC033916	ncRNA
common_peak2-20343-4-5--0.608423014574403-0.909929411522249	chr10	7473280	7473605	+	0	NA	intron (NM_011835, intron 7 of 10)	L1Md_F2|LINE|L1	27273	NM_145418	215751	Mm.471825	NM_145418	ENSMUSG00000040006	Ginm1	AA589616	glycoprotein integral membrane 1	protein-coding
unique_peak1-395-15-0-4.01216475055566-5.11750992628768	chr1	153988233	153988992	+	0	NA	Intergenic	Intergenic	-51162	NM_197990	69399	Mm.278031	NM_197990	ENSMUSG00000032666	1700025G04Rik	2610510E02Rik|2900042O04Rik|ENSMUSG00000073540	RIKEN cDNA 1700025G04 gene	protein-coding
common_peak2-21700-9-7-0.18961340640422-1.05908390183068	chr11	106659891	106660170	+	0	NA	intron (NM_177088, intron 4 of 19)	intron (NM_177088, intron 4 of 19)	9464	NM_001166685	320162	Mm.30524	NM_177088	ENSMUSG00000018372	Cep95	4732496G21Rik|AI118346|AI448335|Ccdc45|D330027A14Rik|F630025I20Rik	centrosomal protein 95	protein-coding
common_peak1-11240-20-14-0.581184188982674-0.690311289528838	chr15	79773770	79774616	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	-11117	NM_144811	52609	Mm.323442	NM_144811	ENSMUSG00000053411	Cbx7	1600014J01Rik|AI851678|D15Ertd417e	chromobox 7	protein-coding
common_peak2-21200-19-29--0.504203268946832-0.580176690544129	chr11	60878315	60878805	+	0	NA	promoter-TSS (NM_010603)	promoter-TSS (NM_010603)	-746	NM_010603	16515	Mm.4970	NM_010603		Kcnj12	IRK-2|IRK2|Kir2.2|MB-IRK2	potassium inwardly-rectifying channel, subfamily J, member 12	protein-coding
common_peak2-20916-37-41-0.133675648707058-0.363463023472118	chr11	5787290	5788431	+	0	NA	Intergenic	B3|SINE|B2	-9601	NM_008894	18972	Mm.35788	NM_008894	ENSMUSG00000020471	Pold2	50kDa|p50|po1D2	polymerase (DNA directed), delta 2, regulatory subunit	protein-coding
unique_peak1-5321-15-3-2.01216475055566-3.03427613622886	chr5	77387333	77388097	+	0	NA	intron (NM_025939, intron 2 of 8)	B1_Mus2|SINE|Alu	-7112	NM_172146	231327	Mm.202337	NM_172146	ENSMUSG00000029246	Ppat	5730454C12Rik|AA408689|AA675351|AI507113|C79945	phosphoribosyl pyrophosphate amidotransferase	protein-coding
common_peak2-24602-23-26--0.0331199976543877-0.301029995663988	chr17	32787770	32788434	+	0	NA	Intergenic	Intergenic	-8326	NM_001101588	631304	Mm.328950	NM_001101588	ENSMUSG00000090700	Cyp4f40	EG631304	cytochrome P450, family 4, subfamily f, polypeptide 40	protein-coding
unique_peak2-38270-6-8--0.60452689106201-1.03789460276074	chr6	128438812	128439281	+	0	NA	exon (NM_007376, exon 29 of 36)	exon (NM_007376, exon 29 of 36)	37692	NM_007376	11287	Mm.260144	NM_007376	ENSMUSG00000030359	Pzp	A1m|A2m|AI893533|MAM	pregnancy zone protein	protein-coding
common_peak2-26374-20-44--1.00377831173848-1.92432670720421	chr2	44926199	44927176	+	0	NA	intron (NM_001289521, intron 1 of 8)	intron (NM_001289521, intron 1 of 8)	39110	NM_001289521	24136	Mm.440702	NM_015753	ENSMUSG00000026872	Zeb2	9130203F04Rik|D130016B08Rik|SIP1|Zfhx1b|Zfx1b|Zfxh1b	zinc finger E-box binding homeobox 2	protein-coding
unique_peak2-36493-6-5--0.0195643903408542-0.947717972411649	chr2	153592288	153592692	+	0	NA	intron (NM_007896, intron 6 of 6)	intron (NM_007896, intron 6 of 6)	-14125	NR_036629	100504221	Mm.246778	NM_177849	ENSMUSG00000044083	Efcab8	A630008I04|EG329541	EF-hand calcium binding domain 8	ncRNA
common_peak1-17099-16-25--0.58217607587303-0.633951497070961	chr6	113166324	113167022	+	0	NA	Intergenic	Intergenic	-21164	NM_026849	97287	Mm.197816	NM_026849	ENSMUSG00000030269	Mtmr14	1110061O04Rik|AW553738|C76151	myotubularin related protein 14	protein-coding
common_peak1-8258-67-108--0.223772841993931-0.544331390712582	chr10	20311266	20313109	+	0	NA	intron (NM_013875, intron 2 of 12)	intron (NM_013875, intron 2 of 12)	132687	NM_013875	29863	Mm.425617	NM_013875	ENSMUSG00000019990	Pde7b	-	phosphodiesterase 7B	protein-coding
unique_peak2-36285-7-8--0.370834171144123-1.00793137938329	chr2	69401734	69402215	+	0	NA	intron (NM_001081088, intron 1 of 78)	intron (NM_001081088, intron 1 of 78)	22150	NM_001081088	14725	Mm.23847	NM_001081088	ENSMUSG00000027070	Lrp2	AI315343|AW536255|D230004K18Rik|Gp330|Megalin|b2b1625.2Clo	low density lipoprotein receptor-related protein 2	protein-coding
common_peak2-27350-15-7-1.01216475055566-1.08658567012551	chr3	79193760	79194145	+	0	NA	intron (NM_001142953, intron 1 of 4)	intron (NM_001142953, intron 1 of 4)	44654	NM_001142953	100233207	Mm.373801	NM_001142953	ENSMUSG00000091685	Gm17359	-	predicted gene, 17359	protein-coding
common_peak2-23652-42-83--0.649988094911577-1.64416639885613	chr15	84923317	84924049	+	0	NA	intron (NM_080470, intron 15 of 24)	intron (NM_080470, intron 15 of 24)	38704	NM_080470	140557	Mm.182737	NM_080470	ENSMUSG00000022432	Smc1b	SMC-1B|SMC1beta|Smc1l2	structural maintenance of chromosomes 1B	protein-coding
unique_peak1-4491-7-0-2.79909083029819-2.40823996531185	chr3	127696626	127697120	+	0	NA	Intergenic	Intergenic	77784	NR_040552	329753	Mm.119720	NR_040552		9830132P13Rik	9830132P13	RIKEN cDNA 9830132P13 gene	ncRNA
common_peak2-21745-39-53--0.139126255244315-0.335101043913478	chr11	115765405	115766098	+	0	NA	intron (NM_183259, intron 1 of 2)	intron (NM_183259, intron 1 of 2)	4298	NM_183259	66528	Mm.275740	NM_183259	ENSMUSG00000048442	Smim5	2210020M01Rik	small integral membrane protein 5	protein-coding
common_peak2-22626-29-55--0.695064841442493-1.27423323032613	chr13	81782831	81783765	+	0	NA	Intergenic	ORR1D2|LTR|MaLR	-11155	NM_054053	110789	Mm.288694	NM_054053	ENSMUSG00000069170	Gpr98	Frings|Mass1|Mgr1|VLGR1	G protein-coupled receptor 98	protein-coding
unique_peak2-38166-6-7--0.434601889619698-0.97990265578305	chr6	88926614	88927025	+	0	NA	Intergenic	Intergenic	74574	NM_011906	24100	Mm.284480	NM_011906	ENSMUSG00000002871	Tpra1	40kDa|Gpr175|Tpra40	transmembrane protein, adipocyte asscociated 1	protein-coding
common_peak1-10602-37-42-0.0997283167837208-0.340524918943711	chr14	31661255	31662263	+	0	NA	intron (NM_028839, intron 1 of 7)	intron (NM_028839, intron 1 of 7)	22979	NM_028839	69179	Mm.143025	NM_028839	ENSMUSG00000006526	Tmem110	1810038N08Rik|2310014H19Rik|AW554125	transmembrane protein 110	protein-coding
unique_peak1-2442-13-1-2.77847203063777-3.64038867156802	chr15	101598713	101599324	+	0	NA	Intergenic	Intergenic	-5083	NR_033444	406222	Mm.359153	NM_001003669	ENSMUSG00000067596	Krt74	K74|Kb37	keratin 74	pseudo
common_peak2-23610-10-9-0.0344872501214071-1.05503135781948	chr15	81663987	81664424	+	0	NA	Intergenic	Intergenic	22361	NM_017376	21685	Mm.270278	NM_017376	ENSMUSG00000022389	Tef	2310028D20Rik	thyrotroph embryonic factor	protein-coding
unique_peak1-6271-11-6-0.701338662194009-1.32595962126035	chr7	25434703	25435225	+	0	NA	Intergenic	Intergenic	-11349	NR_030681	100043706	Mm.483825	NR_030681		Gm4598	-	predicted gene 4598	ncRNA
common_peak1-13980-19-16-0.315224485411347-0.448200956659575	chr2	102132823	102133440	+	0	NA	Intergenic	Intergenic	-106514	NM_001290784	241576	Mm.489740	NM_178886	ENSMUSG00000048058	Ldlrad3	6430500P08|AI194318|Lrad3	low density lipoprotein receptor class A domain containing 3	protein-coding
common_peak2-21997-34-69--0.7472144899437-1.74156632662937	chr12	54984729	54986473	+	0	NA	intron (NM_013780, intron 5 of 11)	intron (NM_013780, intron 5 of 11)	319260	NM_028133	112407	Mm.133037	NM_028133	ENSMUSG00000035105	Egln3	2610021G09Rik|AI505553|AI648162|Hif-p4h-3|Phd3|SM-20	egl-9 family hypoxia-inducible factor 3	protein-coding
common_peak2-24205-20-43--0.971356834046104-1.80105410004791	chr16	65561936	65562833	+	0	NA	intron (NM_026879, intron 1 of 5)	intron (NM_026879, intron 1 of 5)	558	NM_026879	68942	Mm.432944	NM_026879	ENSMUSG00000004843	Chmp2b	1190006E07Rik	charged multivesicular body protein 2B	protein-coding
common_peak2-28768-11-5-0.923731083530457-1.477227296591	chr5	51511434	51511811	+	0	NA	Intergenic	Intergenic	433538	NR_027710	19017	Mm.259072	NM_008904	ENSMUSG00000029167	Ppargc1a	A830037N07Rik|ENSMUSG00000079510|Gm11133|PGC-1|PGC-1v|Pgc-1alpha|Pgc1|Pgco1|Ppargc1	peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	protein-coding
unique_peak2-36206-7-9--0.522837264589173-1.05908390183068	chr2	32897792	32898323	+	0	NA	intron (NM_178888, intron 7 of 28)	L1Md_T|LINE|L1	44667	NM_178888	99326	Mm.41290	NM_178888	ENSMUSG00000038860	Garnl3	AW120551	GTPase activating RANGAP domain-like 3	protein-coding
common_peak2-28167-12-6-0.841421063030034-1.58711810488664	chr4	108387425	108387843	+	0	NA	intron (NM_183300, intron 1 of 15)	intron (NM_183300, intron 1 of 15)	-4620	NM_001254730	73133	Mm.196776	NM_001254730		3110021N24Rik	2610002D03Rik	RIKEN cDNA 3110021N24 gene	protein-coding
unique_peak1-3822-16-4-1.7963355473807-2.18192634393779	chr2	124714947	124715622	+	0	NA	Intergenic	Intergenic	-178579	NM_175034	317750	Mm.330538	NM_175034	ENSMUSG00000035183	Slc24a5	F630045L20Rik|JSX|NCKX5|NCX5|Oca6	solute carrier family 24, member 5	protein-coding
common_peak2-26748-12-17--0.521149016354673-0.417187467413082	chr2	133716224	133716933	+	0	NA	Intergenic	L1Md_F2|LINE|L1	338683	NM_007553	12156	Mm.103205	NM_007553	ENSMUSG00000027358	Bmp2	AI467020|Bmp2a	bone morphogenetic protein 2	protein-coding
common_peak1-11032-14-9-0.577288065470282-0.630231561310125	chr15	41286404	41287145	+	0	NA	intron (NM_001130166, intron 1 of 16)	intron (NM_001130166, intron 1 of 16)	7746	NM_001130166	170719	Mm.254267	NM_130885	ENSMUSG00000022307	Oxr1	2210416C20Rik|C7|C7B	oxidation resistance 1	protein-coding
common_peak2-26185-12-21--0.810655633549659-0.713635438203849	chr2	25054328	25054966	+	0	NA	TTS (NM_021393)	TTS (NM_021393)	-2314	NM_146115	227612	Mm.119747	NM_146115	ENSMUSG00000059555	Tor4a	A830007P12Rik	torsin family 4, member A	protein-coding
common_peak1-15955-9-20--1.20270401637454-1.23014042908325	chr5	30888612	30889154	+	0	NA	intron (NR_040427, intron 1 of 3)	intron (NR_040427, intron 1 of 3)	-1660	NM_010608	16527	Mm.439936	NM_010608	ENSMUSG00000049265	Kcnk3	TASK|Task-1|cTBAK-1	potassium channel, subfamily K, member 3	protein-coding
unique_peak1-6547-9-7-0.18961340640422-1.05908390183068	chr7	127930953	127931600	+	0	NA	intron (NM_177697, intron 21 of 33)	intron (NM_177697, intron 21 of 33)	48205	NM_177697	233813	Mm.389939	NM_177697	ENSMUSG00000030889	Vwa3a	E030013G06Rik	von Willebrand factor A domain containing 3A	protein-coding
common_peak2-24753-40-90--0.848818957447598-2.67426933041074	chr17	55891404	55892713	+	0	NA	intron (NM_139138, intron 1 of 16)	intron (NM_139138, intron 1 of 16)	2809	NM_139138	52614	Mm.210497	NM_139138	ENSMUSG00000032915	Emr4	D17Ertd479e|Egf-tm7|Fire|Gpr127	EGF-like module containing, mucin-like, hormone receptor-like sequence 4	protein-coding
common_peak2-26198-22-32--0.397110014271049-0.488172498216822	chr2	25500629	25501463	+	0	NA	Intergenic	Intergenic	-7592	NM_033145	78076	Mm.196708	NM_033145	ENSMUSG00000036449	Lcn8	9230106L18Rik|EP17|Lcn5|mEP17	lipocalin 8	protein-coding
common_peak2-30866-4-6--0.830815435910851-0.989110657569874	chr7	139295328	139295667	+	0	NA	intron (NM_018867, intron 4 of 13)	MTE2b|LTR|MaLR	50927	NM_018867	55987	Mm.471654	NM_018867	ENSMUSG00000030862	Cpxm2	4632435C11Rik|CPX-2|Cpx2	carboxypeptidase X 2 (M14 family)	protein-coding
common_peak1-11949-46-68--0.210528513529368-0.409674412769129	chr17	5189139	5190468	+	0	NA	intron (NM_001085355, intron 4 of 19)	intron (NM_001085355, intron 4 of 19)	194729	NM_001085355	239985	Mm.133401	NM_001085355	ENSMUSG00000069729	Arid1b	8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235	AT rich interactive domain 1B (SWI-like)	protein-coding
unique_peak1-4177-15-7-1.01216475055566-1.08658567012551	chr2	113478526	113479196	+	0	NA	intron (NM_001285459, intron 13 of 16)	intron (NM_001285459, intron 13 of 16)	-46386	NM_001287818	14260	Mm.4938	NM_010230	ENSMUSG00000044042	Fmn1	Fmn|ld	formin 1	protein-coding
unique_peak1-6788-9-6-0.382258484346616-1.11707584880836	chr8	68793908	68794414	+	0	NA	intron (NM_001293784, intron 4 of 8)	intron (NM_001293784, intron 4 of 8)	-116039	NM_001166375	72925	Mm.380457	NM_175188	ENSMUSG00000036469	March1	2900024D24Rik|BB085186	membrane-associated ring finger (C3HC4) 1	protein-coding
common_peak2-21754-7-5-0.214128329577033-1.01466476204226	chr11	115974459	115974790	+	0	NA	Intergenic	Intergenic	-3075	NM_172570	217333	Mm.347770	NM_172570	ENSMUSG00000020773	Trim47	2210023F24Rik	tripartite motif-containing 47	protein-coding
common_peak2-30374-13-8-0.608547029195456-0.660903317613904	chr7	28945875	28946330	+	0	NA	intron (NM_001164655, intron 17 of 19)	MER2|DNA|MER2_type	-8665	NM_007991	14113	Mm.4595	NM_007991	ENSMUSG00000046865	Fbl	AL022665|FIB|FLRN|RNU3IP1	fibrillarin	protein-coding
unique_peak1-485-11-6-0.701338662194009-1.32595962126035	chr1	177729443	177730101	+	0	NA	intron (NM_029453, intron 22 of 27)	intron (NM_029453, intron 22 of 27)	-81137	NM_012012	26909	Mm.283046	NM_012012	ENSMUSG00000039748	Exo1	5730442G03Rik|Msa	exonuclease 1	protein-coding
unique_peak1-5653-7-2-1.21412832957703-1.45399745587252	chr6	29858379	29858871	+	0	NA	intron (NM_021414, intron 16 of 16)	intron (NM_021414, intron 16 of 16)	-8388	NM_001037740	320609	Mm.56097	NM_177204	ENSMUSG00000039629	Strip2	D330017J20Rik|Fam40b	striatin interacting protein 2	protein-coding
common_peak2-20141-26-21-0.468467473521165-0.647723624534446	chr1	167270295	167271008	+	0	NA	intron (NM_028759, intron 14 of 18)	(CAAAC)n|Simple_repeat|Simple_repeat	44754	NM_001081126	240888	Mm.329929	NM_001081126		Gpr161	Gm208|Gm208Gpr|vl	G protein-coupled receptor 161	protein-coding
common_peak2-19980-35-60--0.499367079100383-0.913104017362139	chr1	133669617	133670615	+	0	NA	Intergenic	ORR1A4-int|LTR|MaLR	-23856	NM_178079	212933	Mm.23844	NM_178079	ENSMUSG00000042251	Pm20d1	4732466D17Rik|AI098026	peptidase M20 domain containing 1	protein-coding
common_peak2-26082-9-7-0.18961340640422-1.05908390183068	chr2	146554824	146555239	+	0	NA	Intergenic	Intergenic	-126594	NM_001033298	228730	Mm.292352	NM_001033298	ENSMUSG00000074749	Kiz	Gm114|Ncrna00153|Plk1s1	kizuna centrosomal protein	protein-coding
unique_peak1-2864-24-9-1.47128180788035-2.52428350728854	chr17	34675393	34676472	+	0	NA	Intergenic	Intergenic	-21635	NM_030747	624681	Mm.471592	NM_030747	ENSMUSG00000058762	Btnl6	EG624681|Gm6519|NG13	butyrophilin-like 6	protein-coding
common_peak2-20116-9-15--0.81038659359578-0.630231561310125	chr1	162225872	162226435	+	0	NA	intron (NM_001038621, intron 2 of 8)	intron (NM_001038621, intron 2 of 8)	55549	NM_001038621	29809	Mm.25833	NM_013862	ENSMUSG00000026721	Rabgap1l	5830411O09Rik|8430421H08Rik|9630005B12Rik|AW049894|HHL|Hh1|mKIAA0471	RAB GTPase activating protein 1-like	protein-coding
unique_peak2-36574-7-6--0.00826409175941478-0.97990265578305	chr2	173255520	173256009	+	0	NA	Intergenic	Intergenic	-92329	NM_028158	72221	Mm.46132	NM_028158	ENSMUSG00000027518	1700021F07Rik	-	RIKEN cDNA 1700021F07 gene	protein-coding
common_peak2-29057-12-16--0.4386868561627-0.368541233333383	chr5	115652330	115652831	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-16450	NM_013879	29867	Mm.38551	NM_013879	ENSMUSG00000029544	Cabp1	caldendrin	calcium binding protein 1	protein-coding
unique_peak1-7071-9-1-2.18961340640422-2.31132995230379	chr9	15004776	15005309	+	0	NA	Intergenic	MTD|LTR|MaLR	-38447	NM_026955	69137	Mm.41396	NM_026955	ENSMUSG00000031937	Vstm5	2200002K05Rik	V-set and transmembrane domain containing 5	protein-coding
common_peak1-14893-64-102--0.221054125474615-0.525237659713319	chr3	96218938	96220893	+	0	NA	Intergenic	Intergenic	-1159	NR_001579	21748		NR_001579	ENSMUSG00000064796	Terc	mTER|mTR	telomerase RNA component	ncRNA
common_peak2-26750-78-57-0.948840099032963-4.25953149555829	chr2	136677975	136679525	+	0	NA	Intergenic	PB1D10|SINE|Alu	-38204	NM_028201	74243	Mm.330612	NM_028201	ENSMUSG00000027281	Slx4ip	2210009G21Rik|2410004I22Rik|C85661|Slxip	SLX4 interacting protein	protein-coding
common_peak1-17449-31-20-0.832921248034363-1.41893667893732	chr7	16844631	16845943	+	0	NA	promoter-TSS (NM_001173550)	promoter-TSS (NM_001173550)	-398	NM_007577	12273	Mm.247623	NM_007577	ENSMUSG00000049130	C5ar1	C5aR|C5r1|Cd88|D7Msu1	complement component 5a receptor 1	protein-coding
unique_peak2-36790-6-21--1.894033508257-2.21753093801298	chr3	79842420	79843080	+	0	NA	Intergenic	Intergenic	152898	NM_133187	68659	Mm.427274	NM_133187	ENSMUSG00000027955	Fam198b	1110032E23Rik|2210419I08Rik|AV011458|Ened	family with sequence similarity 198, member B	protein-coding
common_peak2-31263-23-38--0.563634714353168-0.792515101870073	chr8	70905847	70906920	+	0	NA	intron (NM_172753, intron 6 of 9)	B4A|SINE|B4	14025	NR_038181	73609	Mm.443247	NR_038181	ENSMUSG00000085197	1700125H03Rik	4930510D22Rik	RIKEN cDNA 1700125H03 gene	ncRNA
common_peak2-22016-15-15-0.0121647505556561-0.30803596071496	chr12	57534556	57535250	+	0	NA	Intergenic	Intergenic	-88022	NM_145442	217588	Mm.25656	NM_145442	ENSMUSG00000021028	Mbip	4933408E06Rik	MAP3K12 binding inhibitory protein 1	protein-coding
unique_peak2-34900-4-7--1.02346051385325-1.09384600808989	chr15	82128084	82128579	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-1083	NM_029066	74716	Mm.159315	NM_029066	ENSMUSG00000022455	Wbp2nl	4930521I23Rik|PAWP	WBP2 N-terminal like	protein-coding
common_peak1-7556-21-18-0.32156175182265-0.48779450977742	chr1	39535526	39536327	+	0	NA	promoter-TSS (NM_018775)	promoter-TSS (NM_018775)	-334	NM_018775	54610	Mm.387293	NM_018775	ENSMUSG00000003134	Tbc1d8	AD3|HBLP1|VRP	TBC1 domain family, member 8	protein-coding
unique_peak1-1520-8-0-3.00522241794757-2.70926996097583	chr13	9044680	9045147	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-48238	NM_172585	217980	Mm.234944	NM_172585	ENSMUSG00000033499	Larp4b	A630096F19|AI256361|D13Wsu64e|Larp5	La ribonucleoprotein domain family, member 4B	protein-coding
common_peak1-18631-96-73-0.956597848726378-5.4395444601262	chr8	110845847	110847527	+	0	NA	Intergenic	L1Md_F2|LINE|L1	261890	NR_077224	109215	Mm.65282	NR_077224		3010033K07Rik	-	RIKEN cDNA 3010033K07 gene	ncRNA
common_peak1-10235-13-7-0.778472030637769-0.817533494790411	chr13	52892605	52893378	+	0	NA	Intergenic	RMER2|LTR|ERV1	-40417	NR_027893	105404	Mm.184173	NR_027893		BB123696	-	expressed sequence BB123696	ncRNA
common_peak2-25488-13-19--0.543456064249594-0.466170754204149	chr19	5041245	5041915	+	0	NA	TTS (NM_175383)	TTS (NM_175383)	176	NM_134155	107392	Mm.29628	NM_134155	ENSMUSG00000080268	Brms1	AV003220|AW554636	breast cancer metastasis-suppressor 1	protein-coding
common_peak1-14061-25-27-0.0544949832875021-0.316543811862083	chr2	119674395	119675684	+	0	NA	Intergenic	(TC)n|Simple_repeat|Simple_repeat	-47925	NM_001164274	29808	Mm.87532	NM_013720	ENSMUSG00000033943	Mga	AV312082|C130042M01Rik|C80739|D030062C11Rik|Mad5	MAX gene associated	protein-coding
unique_peak2-34845-6-7--0.434601889619698-0.97990265578305	chr15	76068975	76069363	+	0	NA	intron (NM_001163575, intron 9 of 10)	intron (NM_001163575, intron 9 of 10)	4701	NM_001163576	671535	Mm.373750	NM_001163575	ENSMUSG00000063268	Parp10	-	poly (ADP-ribose) polymerase family, member 10	protein-coding
common_peak1-10662-37-57--0.331987923641753-0.556612435105728	chr14	49065749	49067219	+	0	NA	intron (NM_172600, intron 1 of 15)	intron (NM_172600, intron 1 of 15)	457	NM_172600	218989	Mm.85211	NM_172600	ENSMUSG00000036339	Tmem260	5930435P15|6720456H20Rik	transmembrane protein 260	protein-coding
common_peak2-19681-66-118--0.376334098882102-1.00183416889097	chr1	58423121	58424112	+	0	NA	intron (NM_001008419, intron 34 of 35)	intron (NM_001008419, intron 34 of 35)	-26364	NM_025824	66882	Mm.21848	NM_025824	ENSMUSG00000051223	Bzw1	1200015E15Rik|mKIAA0005	basic leucine zipper and W2 domains 1	protein-coding
common_peak2-28627-22-10-1.18785248645011-1.74319850844462	chr5	25613907	25614436	+	0	NA	Intergenic	Intergenic	348327	NM_001004365	242894	Mm.150319	NM_001004365	ENSMUSG00000056367	Actr3b	9630005C02|ARP11|AW047569|Arp3b|Arp3beta	ARP3 actin-related protein 3B	protein-coding
unique_peak1-3581-10-2-1.77145284428761-2.09384600808989	chr19	29469399	29469881	+	0	NA	Intergenic	RMER10A|LTR|ERVL	-15769	NM_021396	58205	Mm.116737	NM_021396		Pdcd1lg2	B7-DC|Btdc|F730015O22Rik|PD-L2	programmed cell death 1 ligand 2	protein-coding
common_peak2-28875-28-15-1.05295911982146-1.80321929531239	chr5	77358241	77358817	+	0	NA	intron (NM_172146, intron 1 of 10)	intron (NM_172146, intron 1 of 10)	-21907	NM_025939	67054	Mm.182931	NM_025939	ENSMUSG00000029247	Paics	2610511I09Rik|ADE2H1|AIRC|PAIS	phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase	protein-coding
unique_peak2-36476-4-6--0.830815435910851-0.989110657569874	chr2	148681184	148681568	+	0	NA	Intergenic	Intergenic	-4706	NM_029960	77705	Mm.159975	NM_029960	ENSMUSG00000027446	9230104L09Rik	mCST E2	RIKEN cDNA 9230104L09 gene	protein-coding
unique_peak2-39576-2-6--1.72480917832092-1.26211192963361	chr9	75232195	75232573	+	0	NA	Intergenic	RLTR40|LTR|ERVK	24782	NM_027418	50772	Mm.480076	NM_015806	ENSMUSG00000042688	Mapk6	2610021I23Rik|D130053K17Rik|Erk3|Mapk4|Mapk63|Prkm4|Prkm6	mitogen-activated protein kinase 6	protein-coding
unique_peak2-34718-2-6--1.72480917832092-1.26211192963361	chr15	36341874	36342294	+	0	NA	Intergenic	L1MB4|LINE|L1	84462	NM_175134	68839	Mm.396537	NM_175134	ENSMUSG00000048307	Ankrd46	1110054N06Rik|AI314978|AI987733	ankyrin repeat domain 46	protein-coding
common_peak1-13096-64-55-0.658091479651-1.96968908950776	chr19	7382021	7383365	+	0	NA	intron (NM_007928, intron 1 of 17)	intron (NM_007928, intron 1 of 17)	-12756	NM_001080390	13728	Mm.258986	NM_007928	ENSMUSG00000024969	Mark2	EMK-1|Emk|Par-1|Par-1b	MAP/microtubule affinity-regulating kinase 2	protein-coding
common_peak1-18742-9-18--1.05831410703937-0.965105923112245	chr8	124662815	124663325	+	0	NA	Intergenic	Intergenic	-142971	NM_009569	22761	Mm.3105	NM_009569	ENSMUSG00000049577	Zfpm1	FOG|Fog1	zinc finger protein, multitype 1	protein-coding
unique_peak1-2785-9-3-1.18961340640422-1.57096726280955	chr17	12122731	12123122	+	0	NA	intron (NM_016694, intron 9 of 11)	intron (NM_016694, intron 9 of 11)	-46871	NR_045808	52027	Mm.442257	NR_045808		D17Ertd648e	-	DNA segment, Chr 17, ERATO Doi 648, expressed	ncRNA
common_peak2-25526-41-43-0.241717086211363-0.486454540233427	chr19	5810511	5811288	+	0	NA	Intergenic	Intergenic	-8228	NR_002847	72289	Mm.298256	NR_002847	ENSMUSG00000092341	Malat1	2210401K01Rik|9430072K23Rik|AI647968|Neat2	metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)	ncRNA
common_peak1-13944-149-239-0.022069901627555-0.312269701641632	chr2	90916651	90918951	+	0	NA	Intergenic	Intergenic	-7329	NM_001290765	68427	Mm.192375	NM_026721	ENSMUSG00000002105	Slc39a13	1100001L14Rik|AA387663|ZIP-13|ZIP13	solute carrier family 39 (metal ion transporter), member 13	protein-coding
unique_peak1-3072-9-1-2.18961340640422-2.31132995230379	chr18	13741212	13741812	+	0	NA	Intergenic	L1Md_F3|LINE|L1	389730	NM_145492	225207	Mm.40325	NM_145492	ENSMUSG00000024420	Zfp521	B930086A16Rik|Evi3|Znf521	zinc finger protein 521	protein-coding
common_peak1-13063-24-25-0.0927701846266249-0.337923771396236	chr19	6136612	6137774	+	0	NA	intron (NM_019722, intron 3 of 4)	MIRb|SINE|MIR	3944	NM_019722	56327	Mm.21071	NM_019722		Arl2	2610009M23Rik|AI115441|AW553335	ADP-ribosylation factor-like 2	protein-coding
common_peak1-15585-32-37-0.0311645057760748-0.312460117298692	chr4	129231961	129233146	+	0	NA	intron (NM_001162433, intron 9 of 12)	B3|SINE|B2	2502	NR_106199	102465997		NR_106199		Mir8119	mmu-mir-8119	microRNA mir-8119	ncRNA
unique_peak1-6304-17-4-1.89636824331768-2.60953805094651	chr7	35753917	35754505	+	0	NA	intron (NM_008820, intron 7 of 14)	intron (NM_008820, intron 7 of 14)	56785	NM_008820	18624	Mm.69751	NM_008820	ENSMUSG00000063931	Pepd	Pep-4|Pep4	peptidase D	protein-coding
common_peak2-27288-138-356--0.684109439332709-7.10863648876453	chr3	58413588	58417437	+	0	NA	Intergenic	Lx2|LINE|L1	25617	NM_001081262	545527	Mm.357722	NM_001081262	ENSMUSG00000070471	Erich6	4932431H17Rik|Fam194a	glutamate rich 6	protein-coding
common_peak2-24721-31-21-0.765807052175826-1.27201509741564	chr17	46873699	46874388	+	0	NA	intron (NM_028065, intron 5 of 5)	intron (NM_028065, intron 5 of 5)	-7929	NM_010321	14711	Mm.29395	NM_010321	ENSMUSG00000002769	Gnmt	-	glycine N-methyltransferase	protein-coding
common_peak2-25431-13-5-1.19350952991661-1.95509489018123	chr19	3833951	3834380	+	0	NA	Intergenic	Intergenic	-17608	NM_001271496	12660	Mm.225505	NM_013490	ENSMUSG00000024843	Chka	CK|CK/EK-alpha|Chetk-alpha|Chk|ChoK|EK|EtnK-alpha	choline kinase alpha	protein-coding
common_peak1-19449-19-23--0.18227517405947-0.320777457303847	chrX	101331814	101332588	+	0	NA	intron (NM_001077354, intron 1 of 4)	L1Md_F2|LINE|L1	-20588	NR_030430	751535		NR_030430	miRBase:MI0004258	Mir672	Mirn672|mmu-mir-672	microRNA 672	ncRNA
common_peak1-11373-13-25--0.921967687503323-0.983972868822056	chr15	95804413	95805006	+	0	NA	3' UTR (NM_175344, exon 20 of 20)	3' UTR (NM_175344, exon 20 of 20)	105274	NR_003627	402773	Mm.210567	NM_001033483		D030018L15Rik	-	nuclear receptor coactivator 2 pseudogene	pseudo
common_peak2-25573-32-39--0.0428360756677026-0.301029995663967	chr19	6974960	6976003	+	0	NA	Intergenic	URR1A|DNA|MER1_type	8654	NM_012021	54683	Mm.279782	NM_012021		Prdx5	AOEB166|AOPP|Pmp20|Prdx6|PrxV	peroxiredoxin 5	protein-coding
common_peak1-12398-16-39--1.2036644526193-2.22933157796381	chr17	70850555	70851226	+	0	NA	intron (NM_027712, intron 1 of 9)	ORR1A2|LTR|MaLR	-20560	NM_001128180	224997	Mm.311840	NM_027712	ENSMUSG00000003279	Dlgap1	4933422O14Rik|9630002F18|AI845682|AI848168|BB075781|D17Bwg0511e|GKAP/SAPAP|GKPA/SAPAP|Gkap|Sapap1|mKIAA4162	discs, large (Drosophila) homolog-associated protein 1	protein-coding
common_peak1-18755-30-53--0.585212092671595-1.01050013482523	chr8	126594811	126596116	+	0	NA	Intergenic	Intergenic	48090	NM_001029876	382038	Mm.334891	NM_001029876	ENSMUSG00000031976	Urb2	C77575|mKIAA0133	URB2 ribosome biogenesis 2 homolog (S. cerevisiae)	protein-coding
common_peak1-12541-21-11-0.984526764545079-1.3750876294627	chr18	5380082	5381018	+	0	NA	Intergenic	Lx2B|LINE|L1	-46113	NM_178722	240186	Mm.118257	NM_178722	ENSMUSG00000050945	Zfp438	9430031G09|9430091M14Rik|B830013J05Rik	zinc finger protein 438	protein-coding
common_peak1-11091-46-78--0.405784804928301-0.812309506798822	chr15	59599124	59600712	+	0	NA	Intergenic	IAP-d-int|LTR|ERVK	26596	NR_045076	100503021	Mm.402924	NR_045076		Gm19510	-	predicted gene, 19510	ncRNA
common_peak1-9247-26-10-1.46846747352116-2.57346781069461	chr11	86613979	86615247	+	0	NA	intron (NM_026191, intron 3 of 17)	intron (NM_026191, intron 3 of 17)	6549	NM_026191	67487	Mm.260627	NM_026191	ENSMUSG00000018425	Dhx40	2410016C14Rik|ARG147|DDX40|PAD	DEAH (Asp-Glu-Ala-His) box polypeptide 40	protein-coding
unique_peak2-36198-9-20--1.20270401637454-1.23014042908325	chr2	32693518	32694316	+	0	NA	intron (NM_009295, intron 1 of 18)	L3|LINE|CR1	8835	NM_009295	20910	Mm.278865	NM_009295	ENSMUSG00000026797	Stxbp1	AI317162|AI326233|MMS10-G|Ms10g|Munc-18a|Munc18-1|N-sec1|Rb-sec1|Sxtbp1|Unc18-1|Unc18h|nsec1	syntaxin binding protein 1	protein-coding
common_peak2-30371-12-11-0.0638134843664826-0.337263207250336	chr7	28865514	28866076	+	0	NA	intron (NM_001122603, intron 3 of 19)	L1Md_F2|LINE|L1	9540	NM_001122603	215384	Mm.292276	NM_175444	ENSMUSG00000047730	Fcgbp	A430096B05Rik	Fc fragment of IgG binding protein	protein-coding
common_peak1-15136-48-141--1.17881996826987-6.94494445621707	chr3	142881033	142882684	+	0	NA	Intergenic	Intergenic	-24161	NR_040551	320072	Mm.136397	NR_040551		A830019L24Rik	-	RIKEN cDNA A830019L24 gene	ncRNA
unique_peak1-7207-15-6-1.20480982849805-1.32521814697968	chr9	67208046	67208678	+	0	NA	intron (NM_001081242, intron 15 of 57)	MER5A1|DNA|MER1_type	-123829	NR_029576	387185		NR_029576		Mir190a	Mir190|Mirn190|mir-190|mmu-mir-190|mmu-mir-190a	microRNA 190a	ncRNA
common_peak1-8305-9-22--1.33394854965279-1.52222891542741	chr10	39731412	39731988	+	0	NA	intron (NM_144821, intron 1 of 3)	intron (NM_144821, intron 1 of 3)	13374	NM_144821	215929	Mm.55513	NM_144821	ENSMUSG00000038522	AI317395	AI482555|Naglt1a	expressed sequence AI317395	protein-coding
common_peak1-8021-12-11-0.0638134843664826-0.337263207250336	chr1	168708655	168709336	+	0	NA	Intergenic	Lx4B|LINE|L1	-97019	NM_172844	240894	Mm.246610	NM_172844	ENSMUSG00000026560	Fmo9	4831428F09Rik	flavin containing monooxygenase 9	protein-coding
unique_peak2-34015-2-8--2.08737925770563-1.65811743852845	chr12	104875650	104876027	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-6223	NM_144834	217847	Mm.29094	NM_144834	ENSMUSG00000061947	Serpina10	PZI|ZPI	serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10	protein-coding
unique_peak1-4442-9-1-2.18961340640422-2.31132995230379	chr2	170343551	170344222	+	0	NA	intron (NM_001013369, intron 3 of 3)	intron (NM_001013369, intron 3 of 3)	-6459	NR_040367	100502946	Mm.421284	NR_040367	ENSMUSG00000085495	Gm16796	-	predicted gene, 16796	ncRNA
common_peak2-26160-23-12-1.02132778636799-1.44787515926925	chr2	18392043	18392505	+	0	NA	Intergenic	L1MB4|LINE|L1	-77817	NM_007869	13418	Mm.246674	NM_007869	ENSMUSG00000026740	Dnajc1	4733401K02Rik|AA960110|D230036H06Rik|Dnajl1|ERdj1|ERj1p|MTJ1	DnaJ (Hsp40) homolog, subfamily C, member 1	protein-coding
unique_peak1-3835-11-4-1.18676548936425-1.68134727924692	chr2	3746030	3746548	+	0	NA	Intergenic	RMER30|DNA|MER1_type	115559	NM_025626	66540	Mm.277864	NM_025626	ENSMUSG00000026655	Fam107b	3110001A13Rik|AA589595|AA959793|AI132312	family with sequence similarity 107, member B	protein-coding
common_peak1-9420-21-20-0.177171842487475-0.380101753845079	chr11	101276758	101277723	+	0	NA	intron (NM_144829, intron 2 of 11)	B1_Mus1|SINE|Alu	1507	NM_144829	69684	Mm.146283	NM_144829	ENSMUSG00000075528	Aarsd1	1110069E20Rik|2310044P18Rik|AA589600|AlaX|AlaXp-II	alanyl-tRNA synthetase domain containing 1	protein-coding
unique_peak1-7301-12-6-0.841421063030034-1.58711810488664	chr9	116223691	116224226	+	0	NA	Intergenic	Intergenic	-139477	NM_009371	21813	Mm.172346	NM_009371	ENSMUSG00000032440	Tgfbr2	1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII	transforming growth factor, beta receptor II	protein-coding
common_peak2-21665-14-11-0.314253659636488-0.435191258261915	chr11	103101644	103102084	+	0	NA	intron (NM_016896, intron 3 of 15)	intron (NM_016896, intron 3 of 15)	-22118	NM_177801	328019	Mm.189646	NM_177801	ENSMUSG00000044787	Spata32	4933400C05Rik|VAD1.2	spermatogenesis associated 32	protein-coding
common_peak1-19438-23-50--0.950657837462415-1.97528391682864	chrX	94234300	94235192	+	0	NA	Intergenic	L1Md_F3|LINE|L1	-33189	NM_001033361	245526	Mm.336164	NM_001033361	ENSMUSG00000031212	Pgr15l	-	G protein-coupled receptor 15-like	protein-coding
unique_peak2-37995-2-7--1.91745425626332-1.45399745587252	chr6	24528320	24528735	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-19244	NM_053098	93677	Mm.332941	NM_053098	ENSMUSG00000029683	Lmod2	C-Lmod	leiomodin 2 (cardiac)	protein-coding
common_peak2-32416-10-9-0.0344872501214071-1.05503135781948	chrX	160994070	160994557	+	0	NA	Intergenic	Intergenic	58478	NM_027027	69299	Mm.79031	NM_027027	ENSMUSG00000031384	Asb9	1700011M07Rik	ankyrin repeat and SOCS box-containing 9	protein-coding
common_peak2-26858-43-71--0.387361815918609-0.743411445750435	chr2	155276366	155277388	+	0	NA	Intergenic	Intergenic	-10358	NM_019825	56406	Mm.27592	NM_019825	ENSMUSG00000038369	Ncoa6	AIB3|ASC-2|ASC2|NRC|Ncoa7|PRIP|RAP250|mKIAA0181	nuclear receptor coactivator 6	protein-coding
common_peak2-25411-107-83-0.961729509894635-6.17716421656655	chr19	43614085	43616139	+	0	NA	Intergenic	Intergenic	-16017	NM_010324	14718	Mm.19039	NM_010324	ENSMUSG00000025190	Got1	AI789014|Got-1|cAspAT|cCAT	glutamate oxaloacetate transaminase 1, soluble	protein-coding
unique_peak1-148-14-3-1.89921616035764-2.80787975886178	chr1	71893972	71894566	+	0	NA	Intergenic	Intergenic	-40417	NR_027658	667931	Mm.214128	NR_027658		Gm8883	EG667931|Gm554	predicted gene 8883	ncRNA
unique_peak2-35927-9-14--0.717277189204299-0.53895475198017	chr19	6921996	6922634	+	0	NA	intron (NM_001081291, intron 22 of 26)	intron (NM_001081291, intron 22 of 26)	-7198	NM_019924	56613	Mm.20914	NM_019924	ENSMUSG00000024952	Rps6ka4	1110069D02Rik|90kDa|AI848992|Msk2|mMSK2	ribosomal protein S6 kinase, polypeptide 4	protein-coding
common_peak1-11400-26-27-0.120544170100858-0.335332249061431	chr15	98568247	98569341	+	0	NA	3' UTR (NM_007478, exon 5 of 5)	3' UTR (NM_007478, exon 5 of 5)	-10165	NM_024169	66120	Mm.30729	NM_024169	ENSMUSG00000003355	Fkbp11	1110002O23Rik|FKBP-11	FK506 binding protein 11	protein-coding
common_peak2-20022-16-21--0.341167976369236-0.392630012299441	chr1	135766068	135766973	+	0	NA	Intergenic	PB1D10|SINE|Alu	37230	NM_054076	269120	Mm.59985	NM_054076	ENSMUSG00000010311	Optc	-	opticin	protein-coding
common_peak1-7801-33-37-0.0834100490819436-0.326417267106726	chr1	118310646	118311700	+	0	NA	intron (NM_001077425, intron 14 of 23)	intron (NM_001077425, intron 14 of 23)	729459	NM_001077425	636808	Mm.101576	NM_001077425	ENSMUSG00000070695	Cntnap5a	Caspr5-1|EG636808	contactin associated protein-like 5A	protein-coding
common_peak1-19150-66-121--0.412253673137045-1.16107346372246	chr9	88481705	88483499	+	0	NA	intron (NM_001034906, intron 6 of 6)	intron (NM_001034906, intron 6 of 6)	6728	NM_001034906	547109	Mm.304302	NM_001034906	ENSMUSG00000090693	Trim43a	EG547109|Gm6021	tripartite motif-containing 43A	protein-coding
unique_peak1-574-11-9-0.186765489364251-0.344532117358383	chr10	120209005	120209489	+	0	NA	intron (NR_038000, intron 2 of 2)	intron (NR_038000, intron 2 of 2)	6459	NR_038003	70874	Mm.427286	NR_038000	ENSMUSG00000044544	4921513I03Rik	-	RIKEN cDNA 4921513I03 gene	ncRNA
unique_peak2-35123-3-7--1.41398308995928-1.23214870625617	chr16	25964152	25964585	+	0	NA	intron (NM_173379, intron 14 of 14)	intron (NM_173379, intron 14 of 14)	141502	NM_173379	210530	Mm.326869	NM_173379		Leprel1	4832416N06|AW553532|Mlat4|P3H2	leprecan-like 1	protein-coding
common_peak1-12869-22-28--0.210696890040167-0.337923771396236	chr18	76059129	76059981	+	0	NA	intron (NM_145356, intron 1 of 4)	intron (NM_145356, intron 1 of 4)	79723	NM_145356	207259	Mm.159332	NM_145356	ENSMUSG00000044646	Zbtb7c	B230208J24Rik|Kr-pok|Zbtb36	zinc finger and BTB domain containing 7C	protein-coding
common_peak1-7783-33-71--0.838587438916783-2.20625128121975	chr1	95313410	95314565	+	0	NA	intron (NM_133808, intron 18 of 27)	intron (NM_133808, intron 18 of 27)	28291	NM_001301364	110611	Mm.30012	NM_133808	ENSMUSG00000034088	Hdlbp	1110005P14Rik|AA960365|AI118566|D1Ertd101e	high density lipoprotein (HDL) binding protein	protein-coding
unique_peak1-6796-9-4-0.867685311516858-1.36011389749466	chr8	69966038	69966563	+	0	NA	Intergenic	LTR29|LTR|ERV1	-48357	NM_008673	17960	Mm.14125	NM_008673	ENSMUSG00000025588	Nat1	Nat-1	N-acetyl transferase 1	protein-coding
common_peak1-8422-21-14-0.662598669657717-0.879255460030357	chr10	76121717	76122752	+	0	NA	Intergenic	Lx7|LINE|L1	-36085	NM_146007	12834	Mm.1949	NM_146007	ENSMUSG00000020241	Col6a2	Col6a-2	collagen, type VI, alpha 2	protein-coding
common_peak1-11071-29-21-0.652858461977813-1.06916698217164	chr15	58258661	58259713	+	0	NA	intron (NM_145959, intron 8 of 23)	intron (NM_145959, intron 8 of 23)	12164	NM_145959	210998	Mm.3224	NM_145959	ENSMUSG00000037119	D15Ertd621e	AV220772|BC033609|Fam91a1|SKIN|mKIAA0493	DNA segment, Chr 15, ERATO Doi 621, expressed	protein-coding
common_peak1-15785-11-10-0.0492619656143161-0.31137425193576	chr4	155490483	155491064	+	0	NA	intron (NM_177205, intron 2 of 9)	B2_Mm1t|SINE|B2	6666	NM_177205	230996	Mm.318925	NM_145557	ENSMUSG00000059939	9430015G10Rik	-	RIKEN cDNA 9430015G10 gene	protein-coding
unique_peak2-39692-1-6--2.43441193227435-1.56314192529759	chr9	110657675	110658136	+	0	NA	Intergenic	B3|SINE|B2	-8256	NM_011199	19228	Mm.3542	NM_011199	ENSMUSG00000032492	Pth1r	PPR|Pthr|Pthr1	parathyroid hormone 1 receptor	protein-coding
unique_peak1-4068-16-2-2.53330114154691-3.78760380288747	chr2	65184508	65185349	+	0	NA	intron (NM_177074, intron 7 of 11)	intron (NM_177074, intron 7 of 11)	17155	NM_177074	320106	Mm.227703	NM_177074	ENSMUSG00000061171	Slc38a11	9330158F14Rik	solute carrier family 38, member 11	protein-coding
unique_peak2-36841-4-7--1.02346051385325-1.09384600808989	chr3	88913491	88913898	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-7805	NM_001253751	110196	Mm.39472	NM_134469	ENSMUSG00000059743	Fdps	6030492I17Rik|AI256750|Fdpsl1|mKIAA1293	farnesyl diphosphate synthetase	protein-coding
common_peak2-27933-89-121-0.104229417263116-0.387222165233646	chr4	21847447	21848498	+	0	NA	Intergenic	RMER1C|Other|Other	-10501	NM_175234	76132	Mm.159689	NM_175234		Faxc	6230409E13Rik|AW742931	failed axon connections homolog (Drosophila)	protein-coding
unique_peak1-6137-13-7-0.778472030637769-0.817533494790411	chr6	134998680	134999285	+	0	NA	Intergenic	Intergenic	-16698	NM_181444	232431	Mm.23575	NM_181444	ENSMUSG00000046733	Gprc5a	Rai3|Raig1	G protein-coupled receptor, family C, group 5, member A	protein-coding
unique_peak1-1006-12-2-2.06381348436648-2.79529063155376	chr11	72845725	72846279	+	0	NA	intron (NM_018883, intron 9 of 15)	intron (NM_018883, intron 9 of 15)	13492	NM_018883	55984	Mm.9998	NM_018883	ENSMUSG00000020785	Camkk1	AI846603|CaMKKalpha|Camkk	calcium/calmodulin-dependent protein kinase kinase 1, alpha	protein-coding
common_peak2-27394-18-21--0.146512467408946-0.306326795069975	chr3	88035118	88036284	+	0	NA	Intergenic	Intergenic	16181	NR_029817	387133		NR_029817		Mir9-1	Mirn9|Mirn9-1|mmu-mir-9-1	microRNA 9-1	ncRNA
common_peak1-9111-67-82-0.169372051436071-0.451270827739867	chr11	72607152	72608418	+	0	NA	intron (NM_001024926, intron 1 of 3)	intron (NM_001024926, intron 1 of 3)	1556	NM_001024926	192986	Mm.194755	NM_001024926	ENSMUSG00000057778	Cyb5d2	9330151E16Rik|Gm2	cytochrome b5 domain containing 2	protein-coding
unique_peak2-34029-5-5--0.289342836727009-0.909929411522249	chr12	110953580	110953979	+	0	NA	promoter-TSS (NR_030445)	promoter-TSS (NR_030445)	-8	NR_030445	751539		NR_030445	miRBase:MI0004638	Mir679	Mirn679|mmu-mir-679	microRNA 679	ncRNA
common_peak2-20524-7-6--0.00826409175941478-0.97990265578305	chr10	62221097	62221484	+	0	NA	intron (NM_026201, intron 16 of 24)	intron (NM_026201, intron 16 of 24)	-32443	NM_001033260	216021	Mm.39821	NM_001033260	ENSMUSG00000036923	Stox1	4732470K04Rik|Gm63	storkhead box 1	protein-coding
unique_peak2-34575-9-18--1.05831410703937-0.965105923112245	chr14	67007965	67008850	+	0	NA	Intergenic	ORR1A3|LTR|MaLR	45195	NM_019675	56471	Mm.35474	NM_019675	ENSMUSG00000022044	Stmn4	Lagl|R75359|RB3	stathmin-like 4	protein-coding
unique_peak2-38426-6-7--0.434601889619698-0.97990265578305	chr7	25477184	25477612	+	0	NA	Intergenic	PB1D7|SINE|Alu	-16880	NM_199150	232972	Mm.293074	NM_199150	ENSMUSG00000045587	BC049730	-	cDNA sequence BC049730	protein-coding
unique_peak1-5470-36-11-1.8943585854466-5.11006289713063	chr5	125073336	125075068	+	0	NA	intron (NM_026486, intron 14 of 17)	intron (NM_026486, intron 14 of 17)	-5431	NM_011596	21871	Mm.1158	NM_011596		Atp6v0a2	8430408C20Rik|AI385560|ATP6a2|AW489264|Atp6n1d|Atp6n2|C76904|ISF|J6B7|SHIF|Stv1|TJ6M|TJ6s|Tj6|V-ATPase 116 kDa|V-ATPase a2	ATPase, H+ transporting, lysosomal V0 subunit A2	protein-coding
common_peak1-12771-32-19-0.957163924332297-1.82978420966174	chr18	60951559	60952894	+	0	NA	Intergenic	Intergenic	-11277	NM_001042605	16149	Mm.439737	NM_010545	ENSMUSG00000024610	Cd74	CLIP|DHLAG|HLADG|Ia-GAMMA|Ii	CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)	protein-coding
unique_peak2-35525-6-8--0.60452689106201-1.03789460276074	chr17	50993783	50994264	+	0	NA	intron (NM_001285991, intron 14 of 22)	intron (NM_001285991, intron 14 of 22)	156017	NM_001297747	12228	Mm.392910	NM_009770	ENSMUSG00000022863	Btg3	ANA|tob5	B cell translocation gene 3	protein-coding
common_peak1-13434-57-93--0.288555811598709-0.628512678031267	chr19	55252824	55254680	+	0	NA	Intergenic	Intergenic	-1623	NM_009348	21684	Mm.42139	NM_009348	ENSMUSG00000024979	Tectb	Tctnb	tectorin beta	protein-coding
common_peak2-29570-56-85--0.190668929262855-0.436835517045436	chr6	47771983	47773289	+	0	NA	intron (NM_177882, intron 3 of 3)	intron (NM_177882, intron 3 of 3)	7868	NM_177882	330301	Mm.128149	NM_177882	ENSMUSG00000051499	Zfp786	A730012O14Rik|Znf786	zinc finger protein 786	protein-coding
unique_peak1-3441-8-5-0.420259917226415-1.10484139239135	chr19	7056662	7057248	+	0	NA	TTS (NM_011697)	TTS (NM_011697)	-2004	NM_001166368	14227	Mm.4234	NM_008020	ENSMUSG00000056629	Fkbp2	13kDa|FKBP-2|mFKBP13|mFKBP2	FK506 binding protein 2	protein-coding
unique_peak1-7353-7-3-0.799090830298189-1.23214870625617	chrX	16555050	16555387	+	0	NA	Intergenic	Intergenic	-66328	NM_010883	17986	Mm.5014	NM_010883	ENSMUSG00000040138	Ndp	ND|Ndph	Norrie disease (pseudoglioma) (human)	protein-coding
unique_peak2-32466-4-11--1.6084230145744-1.68134727924692	chr1	20890417	20891007	+	0	NA	intron (NM_028829, intron 1 of 2)	intron (NM_028829, intron 1 of 2)	10009	NM_028829	74229	Mm.40780	NM_028829	ENSMUSG00000025931	Paqr8	1700019B16Rik|3110001D06Rik	progestin and adipoQ receptor family member VIII	protein-coding
common_peak1-9788-18-19--0.00900894365901106-0.306598483909153	chr12	59067020	59067911	+	0	NA	Intergenic	L1_Mus2|LINE|L1	-245326	NM_009216	20605	Mm.278336	NM_009216		Sstr1	SRIF-2|SS-1-R|SS1-R|SS1R|Smstr-1|Smstr1|sst1	somatostatin receptor 1	protein-coding
unique_peak2-36925-2-6--1.72480917832092-1.26211192963361	chr3	101448221	101448637	+	0	NA	Intergenic	RMER15|LTR|ERVL	-39799	NM_144900	11928	Mm.280103	NM_144900	ENSMUSG00000033161	Atp1a1	Atpa-1|BC010319	ATPase, Na+/K+ transporting, alpha 1 polypeptide	protein-coding
common_peak2-20286-12-8-0.478850983645327-0.562038191119709	chr1	191817348	191817822	+	0	NA	Intergenic	Intergenic	-71418	NM_026796	226830	Mm.156895	NM_026796	ENSMUSG00000026603	Smyd2	1110020E07Rik|4930402C15|KMT3C|Zmynd14	SET and MYND domain containing 2	protein-coding
common_peak2-25389-13-9-0.456543935750406-0.53895475198017	chr18	90579631	90580244	+	0	NA	Intergenic	B1F|SINE|Alu	-99609	NM_198295	67988	Mm.268041	NM_198295	ENSMUSG00000024614	Tmx3	6430411B10Rik|A730024F05Rik|AV259382|Txndc10|mKIAA1830	thioredoxin-related transmembrane protein 3	protein-coding
common_peak1-8960-32-25-0.578652301078568-0.97145127402441	chr11	55467915	55469239	+	0	NA	Intergenic	Intergenic	-46877	NM_020492	14654	Mm.89320	NM_020492		Glra1	nmf11|oscillator|ot|spasmodic|spd	glycine receptor, alpha 1 subunit	protein-coding
common_peak1-8089-23-11-1.13680500378792-1.66030262873422	chr1	180777049	180778039	+	0	NA	intron (NM_001161665, intron 5 of 14)	intron (NM_001161665, intron 5 of 14)	318288	NM_001161665	269152	Mm.129727	NM_177724	ENSMUSG00000026494	Kif26b	4832420M10|BC056349|D230039L06Rik	kinesin family member 26B	protein-coding
common_peak2-22101-13-7-0.778472030637769-0.817533494790411	chr12	80228428	80228862	+	0	NA	Intergenic	MERVL-int|LTR|ERVL	-3130	NM_009705	11847	Mm.3506	NM_009705	ENSMUSG00000021125	Arg2	AII|AU022422	arginase type II	protein-coding
unique_peak2-36975-6-8--0.60452689106201-1.03789460276074	chr3	116301244	116301743	+	0	NA	intron (NM_030016, intron 1 of 11)	RSINE1|SINE|B4	3617	NM_001289571	72776	Mm.440836	NM_028349	ENSMUSG00000027959	Sass6	2810453L12Rik	spindle assembly 6 homolog (C. elegans)	protein-coding
common_peak2-22984-17-17-0.0483713367627256-0.325169893479371	chr14	56777636	56778354	+	0	NA	intron (NM_010375, intron 1 of 4)	intron (NM_010375, intron 1 of 4)	421	NM_010375	14944	Mm.14868	NM_010375	ENSMUSG00000040284	Gzmg	Ctla-7|Ctla7	granzyme G	protein-coding
common_peak2-20540-26-30--0.0262972182284127-0.301029995663988	chr10	67284364	67285357	+	0	NA	Intergenic	RLTR12B|LTR|ERVK	90550	NM_178679	216049	Mm.268346	NM_178679	ENSMUSG00000037855	Zfp365	AI839779|AV340892|DBZ|Su48|Znf365|talanin	zinc finger protein 365	protein-coding
common_peak1-15309-35-34-0.302087241517538-0.529980592868312	chr4	44233271	44234656	+	0	NA	TTS (NR_039565)	TTS (NR_039565)	176	NR_039565	100628618		NR_039565	miRBase:MI0018014	Mir5106	mmu-mir-5106|mu-mir-5106	microRNA 5106	ncRNA
common_peak1-17045-31-21-0.765807052175826-1.27201509741564	chr6	94647335	94648719	+	0	NA	intron (NM_008377, intron 1 of 18)	intron (NM_008377, intron 1 of 18)	2112	NM_008377	16206	Mm.245210	NM_008377	ENSMUSG00000030029	Lrig1	D6Bwg0781e|Img|LIG-1	leucine-rich repeats and immunoglobulin-like domains 1	protein-coding
common_peak1-13390-78-53-1.05193359199707-4.98516811282851	chr19	46981869	46984433	+	0	NA	intron (NM_029810, intron 3 of 17)	intron (NM_029810, intron 3 of 17)	53690	NM_029810	76952	Mm.40965	NM_029810	ENSMUSG00000025041	Nt5c2	2010002I23Rik|CnII|ENSMUSG00000025039|Gm9751|Gmp|Nt5b|Pnt5|cN-II	5'-nucleotidase, cytosolic II	protein-coding
unique_peak1-498-9-2-1.60465090568306-1.87199725847353	chr1	180284195	180284637	+	0	NA	Intergenic	Intergenic	-16501	NM_016805	51810	Mm.86589	NM_016805	ENSMUSG00000039630	Hnrnpu	AA408410|AI256620|AL024194|AL024437|AW557595|C86794|Hnrpu|SAFA|Sp120|hnRNP U	heterogeneous nuclear ribonucleoprotein U	protein-coding
unique_peak2-36700-11-16--0.578769256998726-0.503257505534083	chr3	38423652	38424476	+	0	NA	Intergenic	Intergenic	-40326	NM_001167883	99696	Mm.290937	NM_001033198	ENSMUSG00000044864	Ankrd50	AI662170|E430012K20Rik|mKIAA1223|mKIAA3019	ankyrin repeat domain 50	protein-coding
unique_peak2-33982-2-6--1.72480917832092-1.26211192963361	chr12	85486252	85486619	+	0	NA	TTS (NM_027438)	TTS (NM_027438)	3004	NM_027438	70481	Mm.444348	NM_027438	ENSMUSG00000054383	Pnma1	5730402C15Rik	paraneoplastic antigen MA1	protein-coding
unique_peak1-3805-57-10-2.80660142144163-13.0122504788917	chr19	60945434	60947547	+	0	NA	intron (NM_007452, intron 3 of 6)	intron (NM_007452, intron 3 of 6)	3951	NM_007452	11757	Mm.29821	NM_007452	ENSMUSG00000024997	Prdx3	AW822249|Aop1|D0Tohi1|Ef2l|Mer5|Prx3|SP22|TDXM	peroxiredoxin 3	protein-coding
common_peak2-21425-34-62--0.595211396498651-1.14143720324845	chr11	84879729	84881657	+	0	NA	intron (NM_001029934, intron 5 of 33)	IAPEz-int|LTR|ERVK	72764	NM_001029934	237898	Mm.178524	NM_001029934	ENSMUSG00000000804	Usp32	2900074J03Rik|6430526O11Rik|AW045245	ubiquitin specific peptidase 32	protein-coding
common_peak2-24555-9-8-0.0196884049619079-1.03275496310833	chr17	28510735	28511155	+	0	NA	Intergenic	Intergenic	-8857	NM_021478	22157	Mm.42102	NM_021478	ENSMUSG00000037446	Tulp1	Tulp1l	tubby like protein 1	protein-coding
unique_peak2-37867-5-4--0.0263084308932156-0.909929411522249	chr5	137601642	137602077	+	0	NA	Intergenic	Intergenic	-9782	NM_201373	384309	Mm.100647	NM_201373		Trim56	A130009K11Rik|Gm452|RNF109	tripartite motif-containing 56	protein-coding
unique_peak2-36989-8-18--1.24270509549601-1.15812782348128	chr3	121425707	121426410	+	0	NA	promoter-TSS (NM_010171)	promoter-TSS (NM_010171)	-397	NM_010171	14066	Mm.273188	NM_010171	ENSMUSG00000028128	F3	AA409063|CD142|Cf-3|Cf3|TF	coagulation factor III	protein-coding
common_peak1-14508-46-32-0.853601823890348-2.18118381021476	chr3	19705982	19707676	+	0	NA	Intergenic	Lx3C|LINE|L1	-88042	NR_027985	70808	Mm.427103	NR_027985		4632415L05Rik	AI662792	RRS1 ribosome biogenesis regulator homolog pseudogene	pseudo
common_peak1-13720-21-16-0.482026424015896-0.650819692678078	chr2	30845093	30845875	+	0	NA	intron (NM_028846, intron 1 of 24)	RLTR4_MM-int|LTR|ERV1	7685	NM_028846	74270	Mm.346654	NM_028846	ENSMUSG00000026854	Usp20	1700055M05Rik|AI467231|Vdu2	ubiquitin specific peptidase 20	protein-coding
unique_peak2-38755-7-7--0.200909169701811-0.97990265578305	chr7	119861466	119861840	+	0	NA	intron (NM_001166584, intron 1 of 13)	intron (NM_001166584, intron 1 of 13)	38819	NM_009346	21676	Mm.24685	NM_009346	ENSMUSG00000055320	Tead1	2610024B07Rik|B230114H05Rik|Gtrgeo5|TEAD-1|TEF-1|Tcf13|mTEF-1	TEA domain family member 1	protein-coding
unique_peak2-37778-7-10--0.660340788339108-1.12966497611638	chr5	117122749	117123286	+	0	NA	Intergenic	L1_Rod|LINE|L1	-81191	NM_026886	68955	Mm.146779	NM_026886	ENSMUSG00000063919	Srrm4	1500001A10Rik|B230202K19Rik|bv|mKIAA1853|nSR100	serine/arginine repetitive matrix 4	protein-coding
common_peak1-10618-13-5-1.19350952991661-1.95509489018123	chr14	34088363	34088932	+	0	NA	intron (NM_153800, intron 3 of 10)	ORR1A3|LTR|MaLR	58638	NM_153800	239027	Mm.318350	NM_153800	ENSMUSG00000063506	Arhgap22	B230341L19Rik|RHOGAP2|p68RacGAP	Rho GTPase activating protein 22	protein-coding
common_peak1-14232-84-55-1.12757913683142-5.94791834665157	chr2	152819168	152822038	+	0	NA	intron (NM_001083618, intron 10 of 14)	intron (NM_001083618, intron 10 of 14)	20516	NM_178939	68559	Mm.12746	NM_178939	ENSMUSG00000027472	Pdrg1	1110004D19Rik|AU020945|AV006589|Pdrg	p53 and DNA damage regulated 1	protein-coding
common_peak1-9446-29-35--0.0576349208272013-0.301029995663967	chr11	102818242	102819335	+	0	NA	TTS (NR_037963)	TTS (NR_037963)	6680	NR_037963	69739	Mm.276539	NR_037963	ENSMUSG00000085338	2410004I01Rik	-	RIKEN cDNA 2410004I01 gene	ncRNA
unique_peak1-6406-7-1-1.79909083029819-1.80617997398389	chr7	80792053	80792438	+	0	NA	Intergenic	RLTR14|LTR|ERV1	39204	NR_033604	244061	Mm.484605	NR_033604		Gm4971	EG244061	Smad nuclear interacting protein 1 pseudogene	pseudo
common_peak2-31863-18-28--0.54506184389922-0.591915184368642	chr9	51962937	51963724	+	0	NA	intron (NM_001162921, intron 1 of 5)	intron (NM_001162921, intron 1 of 5)	12886	NM_001162921	244871	Mm.295686	NM_001162921	ENSMUSG00000035164	Zc3h12c	A230108E06|C230027N18Rik|mKIAA1726	zinc finger CCCH type containing 12C	protein-coding
unique_peak2-38893-6-7--0.434601889619698-0.97990265578305	chr8	10785469	10785989	+	0	NA	Intergenic	MTD|LTR|MaLR	96725	NR_040705	320014	Mm.403203	NR_040705		B930025P03Rik	-	RIKEN cDNA B930025P03 gene	ncRNA
common_peak2-27151-113-162-0.0999415914656323-0.409952816792306	chr3	30011549	30013718	+	0	NA	Intergenic	Intergenic	-100507	NM_007963	14013	Mm.56965	NM_007963	ENSMUSG00000027684	Mecom	D630039M04Rik|Evi-1|Evi1|Jbo|Mds|Mds1|Mds1-Evi1|Prdm3|Znfpr1b1	MDS1 and EVI1 complex locus	protein-coding
common_peak1-11446-37-26-0.771105569322351-1.52341724501298	chr15	101173367	101174851	+	0	NA	Intergenic	Intergenic	-25674	NR_035462	100316694		NR_035462	miRBase:MI0009930	Mir1941	mmu-mir-1941	microRNA 1941	ncRNA
unique_peak2-35794-7-7--0.200909169701811-0.97990265578305	chr18	57777131	57777536	+	0	NA	intron (NM_029290, intron 5 of 6)	intron (NM_029290, intron 5 of 6)	20906	NR_045360	70157	Mm.490532	NR_045360		2210409D07Rik	-	RIKEN cDNA 2210409D07 gene	ncRNA
common_peak2-23681-9-17--0.980311595038092-0.844317084070804	chr15	85811736	85812209	+	0	NA	intron (NM_009886, intron 1 of 34)	intron (NM_009886, intron 1 of 34)	52235	NM_009886	12614	Mm.22680	NM_009886	ENSMUSG00000016028	Celsr1	Crsh|Scy|crash	cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog, Drosophila)	protein-coding
common_peak1-17408-20-36--0.721378581037757-1.04213512323541	chr7	4811949	4812795	+	0	NA	intron (NM_026158, intron 1 of 5)	RLTR14-int|LTR|ERV1	5409	NM_026158	67441	Mm.41385	NM_026158	ENSMUSG00000052605	Isoc2b	0610042E07Rik|AI553388|Isoc2	isochorismatase domain containing 2b	protein-coding
common_peak1-14490-28-47--0.532003380899694-0.835790028376013	chr3	9609297	9610350	+	0	NA	5' UTR (NM_133218, exon 1 of 9)	5' UTR (NM_133218, exon 1 of 9)	262	NM_133218	170753	Mm.212908	NM_133218	ENSMUSG00000040209	Zfp704	C030026M03|C030034L19Rik|Gig1|Znf704	zinc finger protein 704	protein-coding
common_peak1-8044-36-38-0.193918867305506-0.429377759889511	chr1	171410562	171412071	+	0	NA	Intergenic	Lx9|LINE|L1	50279	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
common_peak2-22667-10-9-0.0344872501214071-1.05503135781948	chr13	96937580	96938073	+	0	NA	Intergenic	Intergenic	-35294	NM_029210	75209	Mm.40436	NM_029210	ENSMUSG00000051111	Sv2c	4930527L09Rik|AI841971	synaptic vesicle glycoprotein 2c	protein-coding
unique_peak1-2330-29-5-2.52732757989395-5.79706174304447	chr15	83453769	83454955	+	0	NA	intron (NM_022723, intron 10 of 21)	intron (NM_022723, intron 10 of 21)	-28775	NM_183017	223723	Mm.46778	NM_183017	ENSMUSG00000016757	Ttll12	BC055368|D430005B17	tubulin tyrosine ligase-like family, member 12	protein-coding
common_peak2-27433-21-27--0.237865656791368-0.339372226903478	chr3	89714917	89715675	+	0	NA	intron (NM_010559, intron 1 of 9)	intron (NM_010559, intron 1 of 9)	1788	NM_010559	16194	Mm.2856	NM_010559	ENSMUSG00000027947	Il6ra	CD126|IL-6R|Il6r	interleukin 6 receptor, alpha	protein-coding
common_peak2-22537-40-29-0.752085087142579-1.63185160949148	chr13	55992469	55993541	+	0	NA	Intergenic	Intergenic	-60219	NM_011097	18740	Mm.135195	NM_011097	ENSMUSG00000021506	Pitx1	Bft|P-OTX|Potx|Ptx1	paired-like homeodomain transcription factor 1	protein-coding
unique_peak2-39847-7-16--1.28837201095215-1.08658567012551	chrX	57185038	57185723	+	0	NA	Intergenic	L1Md_A|LINE|L1	-67261	NM_007979	14071	Mm.391283	NM_007979	ENSMUSG00000031138	F9	AW111646|Cf-9|Cf9	coagulation factor IX	protein-coding
unique_peak2-37572-12-18--0.599151528355947-0.476916024233333	chr5	34572884	34573620	+	0	NA	intron (NM_001015039, intron 6 of 12)	intron (NM_001015039, intron 6 of 12)	-42893	NM_010753	17122	Mm.259260	NM_010753	ENSMUSG00000037235	Mxd4	2810410A03Rik|Mad4|bHLHc12	Max dimerization protein 4	protein-coding
unique_peak2-36419-10-11--0.228547155712387-0.31137425193576	chr2	128127490	128128228	+	0	NA	intron (NR_028589, intron 2 of 2)	intron (NR_028589, intron 2 of 2)	127228	NR_028591	100043424	Mm.297222	NR_028589		Gm14005	OTTMUSG00000015351	predicted gene 14005	ncRNA
unique_peak1-1533-11-2-1.92373108353046-2.32232533660526	chr13	16714204	16714825	+	0	NA	Intergenic	L1Md_A|LINE|L1	608206	NM_008380	16323	Mm.8042	NM_008380	ENSMUSG00000041324	Inhba	-	inhibin beta-A	protein-coding
unique_peak2-35834-3-13--2.22133801201688-2.36932189928148	chr18	67391085	67391876	+	0	NA	intron (NM_172630, intron 4 of 10)	ORR1A2|LTR|MaLR	14004	NM_172630	225651	Mm.235792	NM_172630	ENSMUSG00000062526	Mppe1	A530095G11	metallophosphoesterase 1	protein-coding
common_peak2-21774-10-16--0.73104749624157-0.604422558181019	chr11	117115150	117115724	+	0	NA	intron (NM_001113486, intron 2 of 11)	MLT1J2|LTR|MaLR	-12123	NM_001113487	53860	Mm.38450	NM_017380	ENSMUSG00000059248	Sept9	MSF1|Msf|PNUTL4|Sint1	septin 9	protein-coding
unique_peak2-37267-7-9--0.522837264589173-1.05908390183068	chr4	109136265	109136782	+	0	NA	intron (NM_013876, intron 1 of 2)	AT_rich|Low_complexity|Low_complexity	12587	NM_013876	29864	Mm.392580	NM_013876	ENSMUSG00000028557	Rnf11	-	ring finger protein 11	protein-coding
common_peak1-9387-7-6--0.00826409175941478-0.97990265578305	chr11	99108227	99108745	+	0	NA	Intergenic	B4A|SINE|B4	-3105	NM_172946	268481	Mm.133193	NM_172946	ENSMUSG00000035849	Krt222	6330509G02Rik	keratin 222	protein-coding
common_peak1-11273-87-75-0.747709592337584-3.34089428837457	chr15	81744677	81746488	+	0	NA	TTS (NM_080633)	TTS (NM_080633)	11061	NM_030229	78929	Mm.215115	NM_030229	ENSMUSG00000022476	Polr3h	5031409G22Rik|RPC8	polymerase (RNA) III (DNA directed) polypeptide H	protein-coding
common_peak2-27804-47-140--1.20470992763225-7.22869651321608	chr3	142881005	142882554	+	0	NA	Intergenic	Intergenic	-24240	NR_040551	320072	Mm.136397	NR_040551		A830019L24Rik	-	RIKEN cDNA A830019L24 gene	ncRNA
common_peak1-7807-48-51-0.270487433093723-0.575830045570382	chr1	119525268	119526959	+	0	NA	Intergenic	RMER13B|LTR|ERVK	681596	NM_011650	22099	Mm.426637	NM_011650	ENSMUSG00000026374	Tsn	2610034C24Rik|AU040286|C3PO|TB-RBP	translin	protein-coding
unique_peak1-67-11-0-3.50869358425161-3.61235994796777	chr1	36266149	36266727	+	0	NA	intron (NM_198899, intron 8 of 40)	intron (NM_198899, intron 8 of 40)	34709	NM_198899	320011	Mm.261022	NM_198899	ENSMUSG00000037470	Uggt1	0910001L17Rik|A930007H10Rik|AA589501|AI414429|AI448372|C820010P03Rik|GT|UGT1|Ugcgl1	UDP-glucose glycoprotein glucosyltransferase 1	protein-coding
common_peak2-28617-27-35--0.178379050547076-0.330208782692001	chr5	24750643	24752087	+	0	NA	intron (NM_144908, intron 1 of 11)	MT2C_Mm|LTR|ERVL	22654	NM_144908	231050	Mm.246718	NM_144908	ENSMUSG00000038072	Galnt11	A430075I06Rik|AI648252|E430002F06Rik	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11	protein-coding
common_peak2-28289-21-19-0.247561170378873-0.427564438475253	chr4	130107615	130108216	+	0	NA	Intergenic	Intergenic	-17790	NM_025998	67149	Mm.423029	NM_025998		Nkain1	2610200G18Rik|2810426C15Rik	Na+/K+ transporting ATPase interacting 1	protein-coding
unique_peak1-1405-17-2-2.63333383748388-3.75443312462699	chr12	75630933	75631206	+	0	NA	Intergenic	ORR1D2|LTR|MaLR	232608	NM_198866	386753	Mm.341686	NM_198866	ENSMUSG00000029878	Dbpht2	Spot2	DNA binding protein with his-thr domain	protein-coding
unique_peak2-35518-0-7--3.84013093047421-1.80617997398389	chr17	49951962	49952265	+	0	NA	intron (NM_177052, intron 13 of 22)	(CA)n|Simple_repeat|Simple_repeat	197616	NM_177052	319991	Mm.441340	NM_177052	ENSMUSG00000023999	Kif6	D130004B10Rik|D130084M03Rik	kinesin family member 6	protein-coding
common_peak1-9763-31-64--0.797129142215331-1.88758293112677	chr12	54984757	54986102	+	0	NA	intron (NM_013780, intron 5 of 11)	ID2|SINE|ID	319432	NM_028133	112407	Mm.133037	NM_028133	ENSMUSG00000035105	Egln3	2610021G09Rik|AI505553|AI648162|Hif-p4h-3|Phd3|SM-20	egl-9 family hypoxia-inducible factor 3	protein-coding
unique_peak1-62-7-6--0.00826409175941478-0.97990265578305	chr1	36087535	36088042	+	0	NA	Intergenic	Intergenic	-37457	NM_015818	50785	Mm.213566	NM_015818	ENSMUSG00000045216	Hs6st1	6Ost1	heparan sulfate 6-O-sulfotransferase 1	protein-coding
common_peak2-30146-32-29-0.372201423611141-0.621525249893804	chr6	145746498	145747479	+	0	NA	Intergenic	Intergenic	-9915	NM_027760	71323	Mm.158669	NM_027760	ENSMUSG00000030259	Rassf8	5133400D11Rik|AA815821|AW123240|Hoj1|mHoj-1	Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	protein-coding
common_peak2-27866-74-171--0.710378177723491-3.76161342832461	chr3	158035441	158037185	+	0	NA	intron (NM_001291453, intron 3 of 25)	intron (NM_001291453, intron 3 of 25)	188872	NM_001291453	242274	Mm.132162	NM_001081358	ENSMUSG00000028176	Lrrc7	AK122498|densin|mKIAA1365	leucine rich repeat containing 7	protein-coding
unique_peak2-32663-1-9--2.94898510510411-2.31132995230379	chr1	135258186	135258513	+	0	NA	Intergenic	Intergenic	-1800	NM_175443	214253	Mm.52111	NM_175443	ENSMUSG00000070644	Etnk2	4933417N20Rik|AI197444|EKI 2|Eki2|Tuc1	ethanolamine kinase 2	protein-coding
common_peak1-18321-53-41-0.748655589637168-2.06745185553308	chr8	56549898	56551343	+	0	NA	Intergenic	Intergenic	510539	NM_001253756	234267	Mm.241700	NM_153581	ENSMUSG00000031517	Gpm6a	Gpm6|M6A	glycoprotein m6a	protein-coding
common_peak2-31117-15-22--0.511397205501357-0.50761186003982	chr8	33731977	33732768	+	0	NA	Intergenic	Intergenic	328126	NM_001177589	100042715	Mm.291093	NM_001177589		Gm3985	-	predicted gene 3985	protein-coding
common_peak2-23557-14-7-0.899216160357645-0.947446088118041	chr15	79322683	79323203	+	0	NA	intron (NM_008427, intron 1 of 1)	intron (NM_008427, intron 1 of 1)	12728	NM_008427	16520	Mm.140760	NM_008427	ENSMUSG00000044216	Kcnj4	IRK3|Kcnf2|MB-IRK3	potassium inwardly-rectifying channel, subfamily J, member 4	protein-coding
unique_peak2-33569-6-8--0.60452689106201-1.03789460276074	chr11	84915972	84916376	+	0	NA	intron (NM_001029934, intron 2 of 33)	B3|SINE|B2	37283	NM_001029934	237898	Mm.178524	NM_001029934	ENSMUSG00000000804	Usp32	2900074J03Rik|6430526O11Rik|AW045245	ubiquitin specific peptidase 32	protein-coding
common_peak1-12792-24-27--0.0141450192898871-0.304978344874324	chr18	64488222	64489288	+	0	NA	Intergenic	Intergenic	-11263	NM_194268	225631	Mm.234723	NM_194268	ENSMUSG00000045991	Onecut2	C730009D12|OC-2|Oc2	one cut domain, family member 2	protein-coding
common_peak1-14495-33-30-0.377141252138654-0.612304185853042	chr3	10366140	10367485	+	0	NA	promoter-TSS (NM_025519)	promoter-TSS (NM_025519)	-161	NM_025519	66371	Mm.366147	NM_025519	ENSMUSG00000027536	Chmp4c	2010012P02Rik|2210015K02Rik|2310010I16Rik|Shax3|Snf7-3	charged multivesicular body protein 4C	protein-coding
common_peak1-7863-51-55-0.267568903544969-0.557749827489198	chr1	133187808	133189494	+	0	NA	intron (NM_001081011, intron 22 of 22)	B4A|SINE|B4	-12511	NM_019777	56489	Mm.386783	NM_019777	ENSMUSG00000042349	Ikbke	AW558201|IKK-i|IKKepsilon|Ikki	inhibitor of kappaB kinase epsilon	protein-coding
common_peak2-25250-35-27-0.6240153364049-1.10223211335955	chr18	65071489	65072551	+	0	NA	intron (NM_001114386, intron 1 of 30)	B4|SINE|B4	24610	NM_001114386	83814	Mm.98668	NM_031881	ENSMUSG00000024589	Nedd4l	1300012C07Rik|Nedd4-2|Nedd4b	neural precursor cell expressed, developmentally down-regulated gene 4-like	protein-coding
common_peak2-25481-5-6--0.511735258063458-0.947717972411649	chr19	4838977	4839306	+	0	NA	promoter-TSS (NM_207268)	promoter-TSS (NM_207268)	181	NM_016892	12460	Mm.434411	NM_016892	ENSMUSG00000034108	Ccs	Ccsd	copper chaperone for superoxide dismutase	protein-coding
unique_peak1-5623-14-3-1.89921616035764-2.80787975886178	chr6	7027719	7028423	+	0	NA	Intergenic	L1_Mus1|LINE|L1	122053	NM_001077713	71238	Mm.389086	NM_001077713		Acn9	0610005M07Rik|4933430A16Rik	ACN9 homolog (S. cerevisiae)	protein-coding
common_peak2-27213-14-27--0.908138761699959-1.05601013496724	chr3	41563362	41564093	+	0	NA	TTS (NM_028667)	TTS (NM_028667)	17187	NM_027271	73852	Mm.29006	NM_027271	ENSMUSG00000025766	D3Ertd751e	2810009O15Rik|4930415G15Rik	DNA segment, Chr 3, ERATO Doi 751, expressed	protein-coding
common_peak2-27249-11-10-0.0492619656143161-0.31137425193576	chr3	53016706	53017226	+	0	NA	intron (NM_175386, intron 2 of 3)	LTR82A|LTR|ERVL	171497	NM_175386	108927	Mm.118617	NM_175386	ENSMUSG00000048332	Lhfp	2810489O06Rik|AI194968	lipoma HMGIC fusion partner	protein-coding
common_peak1-18105-18-15-0.312919151228352-0.456667090758524	chr8	3392812	3393601	+	0	NA	intron (NM_133962, intron 1 of 19)	intron (NM_133962, intron 1 of 19)	198	NM_133962	102098	Mm.170461	NM_133962	ENSMUSG00000004568	Arhgef18	AI467246|D030053O22Rik	rho/rac guanine nucleotide exchange factor (GEF) 18	protein-coding
common_peak2-20755-7-9--0.522837264589173-1.05908390183068	chr10	115314582	115315019	+	0	NA	Intergenic	(CATA)n|Simple_repeat|Simple_repeat	60460	NM_001168679	216350	Mm.22270	NM_146010	ENSMUSG00000034127	Tspan8	C76990|E330007O21Rik|Tm4sf3	tetraspanin 8	protein-coding
unique_peak1-1150-20-9-1.16614668970383-1.52222891542741	chr11	98357098	98358158	+	0	NA	intron (NM_011771, intron 3 of 7)	intron (NM_011771, intron 3 of 7)	49480	NM_010346	14786	Mm.276702	NM_010346	ENSMUSG00000019312	Grb7	mKIAA4028	growth factor receptor bound protein 7	protein-coding
unique_peak2-39201-4-12--1.72390023199434-1.85743853830261	chr8	105289221	105289552	+	0	NA	intron (NM_009866, intron 1 of 12)	intron (NM_009866, intron 1 of 12)	19625	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
unique_peak1-4717-11-1-2.50869358425161-2.83420869758413	chr3	104138815	104139432	+	0	NA	Intergenic	(CAAA)n|Simple_repeat|Simple_repeat	-114794	NM_001159354	99470	Mm.264849	NM_133853	ENSMUSG00000052539	Magi3	4732496O19Rik|6530407C02Rik|AA407180|AI120132|mKIAA1634	membrane associated guanylate kinase, WW and PDZ domain containing 3	protein-coding
common_peak2-21096-10-13--0.450939577048835-0.386243247519795	chr11	51763094	51763709	+	0	NA	Intergenic	Intergenic	-17732	NM_029976	52626	Mm.289456	NM_029976	ENSMUSG00000020392	Cdkn2aipnl	A430101B06Rik|AA409260|D11Ertd497e|MNCb-1520	CDKN2A interacting protein N-terminal like	protein-coding
unique_peak2-37816-5-7--0.704380336005853-1.01466476204226	chr5	124552279	124552692	+	0	NA	Intergenic	RMER19B|LTR|ERVK	-6678	NM_019875	56325	Mm.254839	NM_019875	ENSMUSG00000029408	Abcb9	TAPL|mKIAA1520	ATP-binding cassette, sub-family B (MDR/TAP), member 9	protein-coding
unique_peak2-35892-1-5--2.2120195109379-1.32905871926422	chr19	40992666	40993078	+	0	NA	TTS (NM_028319)	TTS (NM_028319)	23677	NM_028319	72672	Mm.313523	NM_028319	ENSMUSG00000049164	Zfp518a	2810401C22Rik|6330417C12Rik|AI426493|Zfp518|Znf518|Znf518a|mKIAA0335	zinc finger protein 518A	protein-coding
common_peak2-30797-21-29--0.337401330342283-0.403610417161439	chr7	127392938	127393779	+	0	NA	intron (NM_026458, intron 15 of 30)	intron (NM_026458, intron 15 of 30)	45880	NM_026458	67928	Mm.158178	NM_026458	ENSMUSG00000062017	Abca14	1700110B15Rik|4930539G24Rik	ATP-binding cassette, sub-family A (ABC1), member 14	protein-coding
common_peak1-8478-20-25--0.212364933549899-0.342639663781856	chr10	80433579	80434156	+	0	NA	intron (NM_010319, intron 2 of 3)	intron (NM_010319, intron 2 of 3)	30243	NM_001038655	14708	Mm.222496	NM_010319	ENSMUSG00000048240	Gng7	AI840417	guanine nucleotide binding protein (G protein), gamma 7	protein-coding
unique_peak1-2377-6-3-0.565398110380302-1.08602067057793	chr15	95838202	95838660	+	0	NA	Intergenic	Intergenic	71552	NR_003627	402773	Mm.210567	NM_001033483		D030018L15Rik	-	nuclear receptor coactivator 2 pseudogene	pseudo
common_peak2-24730-11-8-0.338768582809301-1.14218153353838	chr17	47439175	47439629	+	0	NA	intron (NM_172622, intron 2 of 16)	intron (NM_172622, intron 2 of 16)	-66434	NM_001146212	64657	Mm.216250	NM_183086	ENSMUSG00000034729	Mrps10	1110038B19Rik|AW743084|Rpms10	mitochondrial ribosomal protein S10	protein-coding
common_peak2-30537-17-25--0.482143379936054-0.479250674391597	chr7	68021440	68021885	+	0	NA	Intergenic	Intergenic	-736557	NM_001082962	20646	Mm.274995	NM_013670	ENSMUSG00000000948	Snrpn	2410045I01Rik|HCERN3|Peg4|Pwcr1|SMN	small nuclear ribonucleoprotein N	protein-coding
common_peak2-19810-4-7--1.02346051385325-1.09384600808989	chr1	88435404	88435694	+	0	NA	Intergenic	B3|SINE|B2	12238	NM_008972	19231	Mm.19187	NM_008972	ENSMUSG00000026238	Ptma	Thym	prothymosin alpha	protein-coding
common_peak2-31018-25-21-0.402418286707809-0.580176690544129	chr8	11339750	11340605	+	0	NA	intron (NM_009932, intron 3 of 47)	intron (NM_009932, intron 3 of 47)	27348	NM_009932	12827	Mm.181021	NM_009932	ENSMUSG00000031503	Col4a2	Col4a-2	collagen, type IV, alpha 2	protein-coding
common_peak1-10885-20-18-0.240147271147608-0.388034239052786	chr15	82345831	82346593	+	0	NA	Intergenic	MMTV-int|LTR|ERVK	-39316	NM_201360	380997	Mm.482248	NM_201360	ENSMUSG00000096852	Cyp2d12	9030605E09Rik	cytochrome P450, family 2, subfamily d, polypeptide 12	protein-coding
common_peak1-13577-40-33-0.571512841500759-1.1451285992054	chr2	13404225	13405483	+	0	NA	intron (NM_001081084, intron 6 of 66)	intron (NM_001081084, intron 6 of 66)	8649	NM_001081084	65969	Mm.313915	NM_001081084	ENSMUSG00000026726	Cubn	AA408369|AL022750|D2Wsu88e	cubilin (intrinsic factor-cobalamin receptor)	protein-coding
common_peak2-30330-5-7--0.704380336005853-1.01466476204226	chr7	25155438	25155797	+	0	NA	intron (NM_001163510, intron 1 of 8)	intron (NM_001163510, intron 1 of 8)	335	NM_008433	16534	Mm.9911	NM_008433	ENSMUSG00000054342	Kcnn4	IK1|IKCA1|KCA4|KCa3.1|SK4|SKCas|mIKCa1	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 4	protein-coding
unique_peak2-32636-8-10--0.454209200689727-1.078512453669	chr1	127344705	127345340	+	0	NA	Intergenic	Intergenic	-12718	NM_001205386	74117	Mm.183102	NM_023735	ENSMUSG00000026341	Actr3	1200003A09Rik|Arp3	ARP3 actin-related protein 3	protein-coding
unique_peak2-38540-6-13--1.2419568116773-1.58711810488664	chr7	48788969	48789583	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-34016	NM_001033530	101835	Mm.370336	NM_001033530	ENSMUSG00000074166	AW146154	AI451288	expressed sequence AW146154	protein-coding
common_peak2-29485-27-6-2.18419102883763-4.54209996799533	chr6	31113721	31114237	+	0	NA	intron (NR_110471, intron 2 of 3)	intron (NR_110471, intron 2 of 3)	54495	NR_110470	232685	Mm.443019	NM_144555		Lincpint	MNCb-1768|Pint|linc-Pint	long intergenic non-protein coding RNA, Trp53 induced transcript	ncRNA
common_peak1-13487-26-16-0.840436250908123-1.24110690293937	chr2	27327762	27328707	+	0	NA	intron (NM_001113574, intron 1 of 12)	intron (NM_001113574, intron 1 of 12)	2684	NM_023336	67382	Mm.28721	NM_023336	ENSMUSG00000026918	Brd3	2410084F24Rik|AW060456|Fsrg2|ORFX|RINGL3	bromodomain containing 3	protein-coding
common_peak1-12258-33-21-0.871905943888232-1.60774463804084	chr17	36930875	36931927	+	0	NA	Intergenic	Lx7|LINE|L1	-17719	NM_201611	399549	Mm.329034	NM_201611	ENSMUSG00000037130	H2-M10.6	-	histocompatibility 2, M region locus 10.6	protein-coding
common_peak1-11608-14-9-0.577288065470282-0.630231561310125	chr16	17928927	17929711	+	0	NA	Intergenic	Intergenic	-1007	NM_153150	13358	Mm.229291	NM_153150	ENSMUSG00000003528	Slc25a1	1300019P08Rik|2610100G11Rik|AI194714|Ctp|Dgsj|Slc20a3	solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1	protein-coding
common_peak1-10752-10-14--0.550475250599749-0.446472590016315	chr14	69815518	69815996	+	0	NA	Intergenic	MLT1A1|LTR|MaLR	7008	NM_010921	18095	Mm.3520	NM_010921	ENSMUSG00000022061	Nkx3-1	Bax|NKX3.1|NKX3A|Nkx-3.1|bagpipe	NK-3 transcription factor, locus 1 (Drosophila)	protein-coding
unique_peak1-7096-9-0-3.18961340640422-3.01029995663981	chr9	40791970	40792514	+	0	NA	intron (NM_019465, intron 6 of 9)	intron (NM_019465, intron 6 of 9)	-20047	NM_001081121	70989	Mm.335087	NM_001081121	ENSMUSG00000032023	4931429I11Rik	BB239335|jhy	RIKEN cDNA 4931429I11 gene	protein-coding
common_peak1-17363-32-65--0.765302100138793-1.72757011346395	chr7	45153890	45155024	+	0	NA	Intergenic	Intergenic	1365447	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak2-20635-9-14--0.717277189204299-0.53895475198017	chr10	80677299	80678100	+	0	NA	intron (NM_178662, intron 3 of 12)	intron (NM_178662, intron 3 of 12)	-12917	NM_027120	69564	Mm.437211	NM_027120	ENSMUSG00000004939	Nmrk2	2310015C21Rik|Itgb1bp3|Mibp	nicotinamide riboside kinase 2	protein-coding
unique_peak2-35399-1-4--1.94898510510411-1.10720996964787	chr17	32017753	32018079	+	0	NA	Intergenic	Intergenic	-25179	NM_010831	17691	Mm.290941	NM_010831	ENSMUSG00000024042	Sik1	Msk|Sik|Snf1lk	salt inducible kinase 1	protein-coding
common_peak1-12184-24-46--0.761378948909921-1.26138754964088	chr17	31855993	31856843	+	0	NA	Intergenic	MTB|LTR|MaLR	41542	NM_001278570	12954	Mm.1228	NM_013501	ENSMUSG00000024041	Cryaa	Acry-1|Crya-1|Crya1|DAcry-1|lop18	crystallin, alpha A	protein-coding
common_peak1-17413-40-44-0.167122586421423-0.413133827688651	chr7	5037809	5039365	+	0	NA	intron (NM_010147, intron 3 of 11)	intron (NM_010147, intron 3 of 11)	6750	NM_001252454	13854	Mm.3091	NM_010147	ENSMUSG00000035203	Epn1	AA269831|Ibp1	epsin 1	protein-coding
common_peak1-8382-11-16--0.578769256998726-0.503257505534083	chr10	62413108	62413756	+	0	NA	intron (NM_177372, intron 2 of 20)	intron (NM_177372, intron 2 of 20)	3655	NM_177372	327762	Mm.21492	NM_177372	ENSMUSG00000036875	Dna2	Dna2l|E130315B21Rik	DNA replication helicase 2 homolog (yeast)	protein-coding
common_peak2-28397-9-7-0.18961340640422-1.05908390183068	chr4	140615391	140615806	+	0	NA	intron (NM_001145958, intron 1 of 35)	intron (NM_001145958, intron 1 of 35)	862	NM_001145958	230872	Mm.80685	NM_172122	ENSMUSG00000040860	Crocc	-	ciliary rootlet coiled-coil, rootletin	protein-coding
unique_peak1-3696-20-5-1.90311228387004-2.81016724606745	chr19	43875461	43876349	+	0	NA	intron (NM_013806, intron 7 of 31)	intron (NM_013806, intron 7 of 31)	19107	NM_013806	12780	Mm.39054	NM_013806	ENSMUSG00000025194	Abcc2	AI173996|Abc30|Cmoat|Mrp2|cMRP	ATP-binding cassette, sub-family C (CFTR/MRP), member 2	protein-coding
common_peak1-16440-18-10-0.853487532591054-1.03889213727317	chr5	134955708	134956568	+	0	NA	Intergenic	ETnERV2-int|LTR|ERVK	-23552	NM_001081464	57080	Mm.332735	NM_020331	ENSMUSG00000023079	Gtf2ird1	1700012P16Rik|BEN|Cream1|ESTM9|GTF3|Gtf2il|MusTRD1|Tg(Alb1-Myc)166.8Sst|WBSCR11|X83320	general transcription factor II I repeat domain-containing 1	protein-coding
unique_peak1-5722-22-6-1.8399291830298-3.01815507148775	chr6	42292600	42293770	+	0	NA	Intergenic	Intergenic	-6642	NM_011777	22793	Mm.282303	NM_011777	ENSMUSG00000029860	Zyx	9530098H06Rik|R75157	zyxin	protein-coding
unique_peak1-1462-11-3-1.50869358425161-1.95434855131066	chr12	110086917	110087500	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	-2131	NM_001012310	104910	Mm.202653	NM_001012310	ENSMUSG00000048856	Slc25a47	AI132487|AI876593|HDMCP	solute carrier family 25, member 47	protein-coding
common_peak1-16442-11-9-0.186765489364251-0.344532117358383	chr5	134958758	134959312	+	0	NA	Intergenic	(CAGA)n|Simple_repeat|Simple_repeat	-26449	NM_001081464	57080	Mm.332735	NM_020331	ENSMUSG00000023079	Gtf2ird1	1700012P16Rik|BEN|Cream1|ESTM9|GTF3|Gtf2il|MusTRD1|Tg(Alb1-Myc)166.8Sst|WBSCR11|X83320	general transcription factor II I repeat domain-containing 1	protein-coding
unique_peak2-35988-5-6--0.511735258063458-0.947717972411649	chr19	27369914	27370334	+	0	NA	Intergenic	MTE2b|LTR|MaLR	-26985	NM_183179	240595	Mm.269759	NM_183179	ENSMUSG00000047298	Kcnv2	KV11.1	potassium channel, subfamily V, member 2	protein-coding
unique_peak2-32628-8-11--0.579740082773585-1.14218153353838	chr1	121350636	121351206	+	0	NA	Intergenic	Intergenic	-32096	NM_008381	16324	Mm.3092	NM_008381	ENSMUSG00000037035	Inhbb	-	inhibin beta-B	protein-coding
common_peak2-29259-10-10--0.103016273628528-0.301029995663987	chr5	140608542	140609025	+	0	NA	intron (NM_010752, intron 12 of 17)	intron (NM_010752, intron 12 of 17)	188723	NM_010752	17120	Mm.27250	NM_010752	ENSMUSG00000029554	Mad1l1	AI173502|AW550425|Mad1	MAD1 mitotic arrest deficient 1-like 1	protein-coding
unique_peak1-6498-10-6-0.549060422951165-1.21398586181642	chr7	114203075	114203637	+	0	NA	Intergenic	MERVL-int|LTR|ERVL	-13988	NM_147033	259035	Mm.377800	NM_147033	ENSMUSG00000049674	Olfr714	MOR263-2|P4	olfactory receptor 714	protein-coding
common_peak2-20045-10-8-0.186490343566457-1.078512453669	chr1	143702965	143703332	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-1150169	NR_040604	75910	Mm.483845	NR_040604		4930590L20Rik	-	RIKEN cDNA 4930590L20 gene	ncRNA
unique_peak2-38855-4-5--0.608423014574403-0.909929411522249	chr7	144678013	144678353	+	0	NA	Intergenic	Intergenic	48826	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
common_peak2-28736-53-108--0.627211312360997-1.97381502576065	chr5	36695213	36696399	+	0	NA	intron (NM_030889, intron 1 of 26)	B4|SINE|B4	44982	NM_030889	81840	Mm.34113	NM_030889	ENSMUSG00000029093	Sorcs2	N28137|mKIAA1329	sortilin-related VPS10 domain containing receptor 2	protein-coding
unique_peak2-37817-5-6--0.511735258063458-0.947717972411649	chr5	124862829	124863227	+	0	NA	intron (NM_001081203, intron 3 of 31)	intron (NM_001081203, intron 3 of 31)	12895	NM_001081203	243272	Mm.23879	NM_001081203	ENSMUSG00000038095	Sbno1	9330180L10Rik|AI849128|AW557836|BC021875|Sbno|mSno1|sno	sno, strawberry notch homolog 1 (Drosophila)	protein-coding
common_peak1-16280-44-36-0.612439468939585-1.33966217785261	chr5	110176334	110177738	+	0	NA	Intergenic	Intergenic	86125	NR_027964	667213	Mm.454429	NR_027964		Gm10416	EG667213|ENSMUSG00000072761	zinc finger protein pseudogene	pseudo
common_peak1-14351-9-15--0.81038659359578-0.630231561310125	chr2	165643896	165644423	+	0	NA	intron (NM_001291158, intron 13 of 23)	PB1D9|SINE|Alu	39514	NM_001252585	228880	Mm.227598	NM_027230	ENSMUSG00000039671	Zmynd8	1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7	zinc finger, MYND-type containing 8	protein-coding
common_peak2-19871-14-11-0.314253659636488-0.435191258261915	chr1	93166276	93166966	+	0	NA	intron (NM_026454, intron 4 of 9)	ORR1D1-int|LTR|MaLR	19725	NM_026454	67921	Mm.337238	NM_026454	ENSMUSG00000034343	Ube2f	2510010F15Rik|AI851109	ubiquitin-conjugating enzyme E2F (putative)	protein-coding
common_peak2-25810-14-8-0.729291158915332-0.771068449301682	chr19	38023384	38023881	+	0	NA	intron (NM_001099634, intron 25 of 52)	B4A|SINE|B4	94435	NM_001099634	226101	Mm.34674	NM_177035	ENSMUSG00000048612	Myof	2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3	myoferlin	protein-coding
common_peak1-7947-43-9-2.46063509063634-8.27956189032735	chr1	153133578	153134949	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-57365	NM_001039512	117198	Mm.33764	NM_028582	ENSMUSG00000023150	Ivns1abp	1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850	influenza virus NS1A binding protein	protein-coding
common_peak1-11409-43-91--0.74099877053331-2.24860704148035	chr15	98984892	98986107	+	0	NA	intron (NM_139140, intron 2 of 12)	RLTR45-int|LTR|ERVK	28223	NM_139140	72572	Mm.276650	NM_139140	ENSMUSG00000051934	Spats2	2700012F11Rik|59kDa|Scr59|p59	spermatogenesis associated, serine-rich 2	protein-coding
unique_peak2-39349-8-12--0.695217300193522-0.475924844171029	chr9	70237769	70238329	+	0	NA	intron (NM_181072, intron 26 of 27)	RSINE1|SINE|B4	15511	NR_049200	100885839		NR_049200	miRBase:MI0019195	Mir5626	mmu-mir-5626	microRNA mir-5626	ncRNA
common_peak1-18929-20-14-0.581184188982674-0.690311289528838	chr9	45420216	45421127	+	0	NA	intron (NM_001081270, intron 3 of 32)	B4A|SINE|B4	-181356	NR_040732	74602	Mm.394117	NR_040732	ENSMUSG00000097074	4833428L15Rik	-	RIKEN cDNA 4833428L15 gene	ncRNA
common_peak2-31637-13-15--0.221527969362231-0.308519316180257	chr8	123717062	123717508	+	0	NA	Intergenic	Intergenic	65700	NM_008024	14241	Mm.5111	NM_008024	ENSMUSG00000097084	Foxl1	FREAC7|Fkh6|fkh-6	forkhead box L1	protein-coding
common_peak2-27365-7-7--0.200909169701811-0.97990265578305	chr3	84040275	84040529	+	0	NA	intron (NM_001271726, intron 1 of 11)	intron (NM_001271726, intron 1 of 11)	-15603	NM_030706	80890	Mm.44876	NM_030706	ENSMUSG00000027993	Trim2	mKIAA0517|narf	tripartite motif-containing 2	protein-coding
common_peak2-31187-20-24--0.155781405183531-0.319918318021793	chr8	48109974	48110892	+	0	NA	intron (NM_177304, intron 1 of 7)	intron (NM_177304, intron 1 of 7)	38154	NM_177304	320981	Mm.211429	NM_177304	ENSMUSG00000038173	Enpp6	4833421B01Rik|B830047L21Rik|D8Ertd514e|E-NPP 6|Npp6	ectonucleotide pyrophosphatase/phosphodiesterase 6	protein-coding
unique_peak1-870-10-1-2.35641534500877-2.57096726280955	chr11	28834774	28835194	+	0	NA	Intergenic	Intergenic	81779	NM_146015	216616	Mm.44176	NM_146015	ENSMUSG00000020467	Efemp1	-	epidermal growth factor-containing fibulin-like extracellular matrix protein 1	protein-coding
unique_peak2-38178-4-5--0.608423014574403-0.909929411522249	chr6	91687813	91688208	+	0	NA	intron (NM_009320, intron 6 of 14)	MIR|SINE|MIR	53949	NM_009320	21366	Mm.395650	NM_009320	ENSMUSG00000030096	Slc6a6	AA589629|C80501|Taut	solute carrier family 6 (neurotransmitter transporter, taurine), member 6	protein-coding
common_peak2-20407-20-24--0.155781405183531-0.319918318021793	chr10	24635447	24636236	+	0	NA	exon (NM_007482, exon 7 of 8)	exon (NM_007482, exon 7 of 8)	5371	NR_105870	102465545		NR_105870		Mir6905	mmu-mir-6905	microRNA mir-6905	ncRNA
unique_peak2-33633-6-6--0.241956811677302-0.947717972411649	chr11	98363977	98364394	+	0	NA	intron (NM_011771, intron 3 of 7)	L1ME1|LINE|L1	43160	NM_011771	22780	Mm.133367	NM_011771	ENSMUSG00000018168	Ikzf3	5830411O07Rik|Aiolos|Zfpn1a3|Znfn1a3	IKAROS family zinc finger 3	protein-coding
common_peak2-24733-5-13--1.51173525806346-1.78669045979184	chr17	47511445	47511794	+	0	NA	intron (NM_001146211, intron 3 of 6)	intron (NM_001146211, intron 3 of 6)	5473	NM_183086	64657	Mm.216250	NM_183086	ENSMUSG00000034729	Mrps10	1110038B19Rik|AW743084|Rpms10	mitochondrial ribosomal protein S10	protein-coding
common_peak2-24741-8-13--0.802132504110034-0.562038191119711	chr17	48002202	48002636	+	0	NA	Intergenic	Intergenic	-30779	NM_001109973	17240	Mm.329100	NM_010783	ENSMUSG00000032717	Mdfi	I-mf|I-mfa	MyoD family inhibitor	protein-coding
common_peak1-9981-150-194-0.333258769319479-1.63862238778831	chr13	9763495	9765440	+	0	NA	promoter-TSS (NM_001199141)	promoter-TSS (NM_001199141)	93	NM_001199141	66505	Mm.397307	NM_144516	ENSMUSG00000021156	Zmynd11	2210402G22Rik|BS69	zinc finger, MYND domain containing 11	protein-coding
common_peak1-8571-20-14-0.581184188982674-0.690311289528838	chr10	96621600	96622604	+	0	NA	Intergenic	Intergenic	123700	NR_045358	75301	Mm.108650	NR_045358		4930556N09Rik	-	RIKEN cDNA 4930556N09 gene	ncRNA
common_peak1-11299-27-40--0.366006053722848-0.494448899774786	chr15	83555212	83555987	+	0	NA	promoter-TSS (NM_001271473)	promoter-TSS (NM_001271473)	-130	NM_022723	64706	Mm.40393	NM_022723	ENSMUSG00000016763	Scube1	7330410C13Rik|A630023E24Rik	signal peptide, CUB domain, EGF-like 1	protein-coding
unique_peak2-35882-2-8--2.08737925770563-1.65811743852845	chr18	82913772	82914268	+	0	NA	Intergenic	Intergenic	14411	NR_045389	76961	Mm.396392	NR_045389		2210420H20Rik	-	RIKEN cDNA 2210420H20 gene	ncRNA
unique_peak1-3554-23-9-1.39983940962172-2.17218792383888	chr19	24642775	24643784	+	0	NA	Intergenic	B3|SINE|B2	-12962	NM_008846	18719	Mm.217214	NM_008846	ENSMUSG00000024867	Pip5k1b	PI4P5K-I[b]|PIP5K1-beta|PIP5KIbeta|Pipk5b|STM7	phosphatidylinositol-4-phosphate 5-kinase, type 1 beta	protein-coding
common_peak2-20894-30-36--0.039777956137077-0.301029995663973	chr11	3963543	3964453	+	0	NA	promoter-TSS (NM_001029937)	promoter-TSS (NM_001029937)	-858	NM_001029937	380683	Mm.296806	NM_001029937		Sec14l3	1110069O07Rik	SEC14-like 3 (S. cerevisiae)	protein-coding
common_peak1-15093-9-17--0.980311595038092-0.844317084070804	chr3	129901401	129901845	+	0	NA	intron (NM_029838, intron 2 of 37)	intron (NM_029838, intron 2 of 37)	17860	NM_001244952	77018	Mm.91728	NM_029838	ENSMUSG00000058897	Col25a1	2700062B08Rik|CLAC-P	collagen, type XXV, alpha 1	protein-coding
common_peak1-7654-45-36-0.650904659715922-1.42954500397923	chr1	74248674	74250546	+	0	NA	Intergenic	Intergenic	-8405	NM_178241	227288	Mm.337035	NM_178241	ENSMUSG00000048480	Cxcr1	Il8ra	chemokine (C-X-C motif) receptor 1	protein-coding
common_peak1-17668-19-10-0.943255708024389-1.16735254179725	chr7	65466692	65467590	+	0	NA	Intergenic	MT2B|LTR|ERVL	-446431	NM_009728	11982	Mm.135129	NM_009728	ENSMUSG00000025324	Atp10a	Atp10c|pfatp	ATPase, class V, type 10A	protein-coding
common_peak1-8072-33-20-0.939020139746768-1.77675427888235	chr1	177718809	177719981	+	0	NA	intron (NM_029453, intron 16 of 27)	intron (NM_029453, intron 16 of 27)	90671	NM_029453	75820	Mm.50361	NM_029453	ENSMUSG00000026523	Wdr64	4930415O10Rik|4930511H01Rik	WD repeat domain 64	protein-coding
unique_peak1-228-14-1-2.89921616035764-3.91338994363176	chr1	89091801	89092426	+	0	NA	exon (NM_021600, exon 8 of 12)	exon (NM_021600, exon 8 of 12)	4941	NM_021600	11447	Mm.2811	NM_021600	ENSMUSG00000026251	Chrnd	Achr-4|Acrd|L10076	cholinergic receptor, nicotinic, delta polypeptide	protein-coding
common_peak2-20426-28-62--0.924320803678454-2.25438184616369	chr10	29312917	29313638	+	0	NA	Intergenic	Intergenic	-57604	NM_028351	72780	Mm.45191	NM_028351	ENSMUSG00000019880	Rspo3	2810459H04Rik|AW742308|Cristin1|Thsd2	R-spondin 3 homolog (Xenopus laevis)	protein-coding
unique_peak2-37066-1-7--2.62705701021674-1.80617997398389	chr3	144662558	144663045	+	0	NA	Intergenic	Intergenic	-24792	NM_207208	99663	Mm.442050	NM_207208	ENSMUSG00000068547	Clca6	9130020L07Rik|AI504701|Clca4	chloride channel calcium activated 6	protein-coding
unique_peak2-35436-7-10--0.660340788339108-1.12966497611638	chr17	34950478	34951133	+	0	NA	exon (NM_011413, exon 29 of 41)	exon (NM_011413, exon 29 of 41)	-9434	NM_009995	13079	Mm.440407	NM_009995	ENSMUSG00000024365	Cyp21a1	21-OH|21OH|21OHA|21OHB|CYP21OH-A|Cyp21|Cyp21-ps1|Cyp21B|Cyp21a2-ps|Cyp21a2ps|Oh21-1|Oh21-2	cytochrome P450, family 21, subfamily a, polypeptide 1	protein-coding
common_peak1-18986-15-16--0.075298090694683-0.301029995663976	chr9	57246810	57247645	+	0	NA	intron (NR_040729, intron 2 of 2)	intron (NR_040729, intron 2 of 2)	8350	NR_040729	73772	Mm.444684	NR_040729		4930430J02Rik	-	RIKEN cDNA 4930430J02 gene	ncRNA
unique_peak1-3502-21-5-1.98452676454508-3.24127775360835	chr19	15337985	15338875	+	0	NA	Intergenic	Intergenic	660682	NM_001205339	107272	Mm.289936	NM_177420	ENSMUSG00000024640	Psat1	D8Ertd814e|EPIP|PSA|Psat	phosphoserine aminotransferase 1	protein-coding
unique_peak1-4591-8-1-2.00522241794757-2.05605744720049	chr3	58369341	58369853	+	0	NA	Intergenic	Intergenic	-10983	NM_001040396	69227	Mm.270950	NM_001040396	ENSMUSG00000075700	Selt	2810407C02Rik|5730408P04Rik	selenoprotein T	protein-coding
unique_peak1-2887-8-6-0.197867495889966-1.03789460276074	chr17	42940339	42940827	+	0	NA	intron (NM_009847, intron 16 of 17)	ID_B1|SINE|B4	-61455	NM_001033493	435529	Mm.136350	NM_001033493	ENSMUSG00000057899	Gpr111	PGR20	G protein-coupled receptor 111	protein-coding
common_peak2-20953-7-8--0.370834171144123-1.00793137938329	chr11	16592728	16593166	+	0	NA	Intergenic	L1Md_A|LINE|L1	-59259	NM_207655	13649	Mm.8534	NM_007912	ENSMUSG00000020122	Egfr	9030024J15Rik|AI552599|Erbb|Errb1|Errp|Wa5|wa-2|wa2	epidermal growth factor receptor	protein-coding
common_peak1-11592-30-29-0.262784813883354-0.465043498729215	chr16	16983139	16984258	+	0	NA	5' UTR (NM_001038663, exon 1 of 8)	5' UTR (NM_001038663, exon 1 of 8)	223	NM_001038663	26413	Mm.196581	NM_011949	ENSMUSG00000063358	Mapk1	9030612K14Rik|AA407128|AU018647|C78273|ERK|Erk2|MAPK2|PRKM2|Prkm1|p41mapk|p42mapk	mitogen-activated protein kinase 1	protein-coding
common_peak2-26525-12-18--0.599151528355947-0.476916024233333	chr2	91157446	91158196	+	0	NA	intron (NM_175123, intron 3 of 8)	Lx8|LINE|L1	52549	NM_023854	77038	Mm.43636	NM_023854	ENSMUSG00000027255	Arfgap2	2310032E02Rik|Zfp289	ADP-ribosylation factor GTPase activating protein 2	protein-coding
common_peak1-11516-19-20-0.0103699038829257-0.306326795069978	chr16	44138165	44139031	+	0	NA	intron (NM_007508, intron 1 of 14)	intron (NM_007508, intron 1 of 14)	534	NM_007508	11964	Mm.217787	NM_007508	ENSMUSG00000052459	Atp6v1a	AI647066|Atp6a1|Atp6a2|Atp6v1a1|VA68|VPP2	ATPase, H+ transporting, lysosomal V1 subunit A	protein-coding
common_peak2-27418-16-4-1.7963355473807-2.18192634393779	chr3	88683789	88684086	+	0	NA	intron (NM_001242372, intron 14 of 32)	intron (NM_001242372, intron 14 of 32)	33935	NM_144898	229524	Mm.440405	NM_144898	ENSMUSG00000068922	Msto1	BC008103|mst	misato homolog 1 (Drosophila)	protein-coding
unique_peak2-32641-6-10--0.894033508256995-1.21398586181642	chr1	130733336	130733821	+	0	NA	Intergenic	Intergenic	-244702	NM_009911	12767	Mm.1401	NM_009911	ENSMUSG00000045382	Cxcr4	CD184|Cmkar4|LESTR|PB-CKR|PBSF/SDF-1|Sdf1r|b2b220Clo	chemokine (C-X-C motif) receptor 4	protein-coding
common_peak1-8356-87-154--0.280487299493068-0.82230735058933	chr10	58445847	58447744	+	0	NA	exon (NM_172788, exon 2 of 10)	exon (NM_172788, exon 2 of 10)	170688	NM_172788	237353	Mm.333078	NM_172788	ENSMUSG00000037990	Sh3rf3	4831416G18Rik|Igfbp5-ip|Sh3md4|Sh3rf31	SH3 domain containing ring finger 3	protein-coding
common_peak2-25335-31-10-1.76580705217583-3.88430425937119	chr18	76200830	76201335	+	0	NA	intron (NM_145356, intron 3 of 4)	intron (NM_145356, intron 3 of 4)	57043	NR_045365	73009	Mm.443541	NR_045365		2900057B20Rik	-	RIKEN cDNA 2900057B20 gene	ncRNA
common_peak1-14268-111-145-0.227869232530151-0.76608571919606	chr2	156179165	156180385	+	0	NA	intron (NM_027585, intron 9 of 12)	intron (NM_027585, intron 9 of 12)	38940	NR_024329	347740	Mm.324242	NR_024329		2900097C17Rik	1810005K14Rik|4930563C06Rik	RIKEN cDNA 2900097C17 gene	ncRNA
common_peak1-11443-91-117-0.190788896240496-0.580457197164831	chr15	100615164	100616598	+	0	NA	intron (NM_021530, intron 5 of 24)	intron (NM_021530, intron 5 of 24)	23703	NM_021530	59033	Mm.209856	NM_021530	ENSMUSG00000023032	Slc4a8	AW493845|C230026C11|NDCBE|kNBC-3	solute carrier family 4 (anion exchanger), member 8	protein-coding
unique_peak2-33326-5-5--0.289342836727009-0.909929411522249	chr11	12435048	12435414	+	0	NA	Intergenic	Intergenic	-70268	NM_001282993	12808	Mm.22847	NM_172496	ENSMUSG00000020173	Cobl	-	cordon-bleu WH2 repeat	protein-coding
common_peak1-8739-13-8-0.608547029195456-0.660903317613904	chr11	3905875	3906547	+	0	NA	Intergenic	(TTTA)n|Simple_repeat|Simple_repeat	16275	NM_001177691	53897	Mm.103414	NM_016922	ENSMUSG00000049721	Gal3st1	Cst|Gcst	galactose-3-O-sulfotransferase 1	protein-coding
common_peak1-9235-74-97-0.101176732863399-0.369847117739386	chr11	85233959	85236040	+	0	NA	intron (NM_001166643, intron 7 of 23)	intron (NM_001166643, intron 7 of 23)	68333	NM_001166643	192197	Mm.287663	NM_138681	ENSMUSG00000059439	Bcas3	1500019F07Rik|2610028P08Rik|AU021018|BC028339|K20D4|rudhira	breast carcinoma amplified sequence 3	protein-coding
unique_peak1-5240-9-0-3.18961340640422-3.01029995663981	chr5	47508324	47508855	+	0	NA	Intergenic	Intergenic	-865805	NR_111900	20563	Mm.289739	NM_178804		Slit2	Drad-1|E030015M03Rik|E130320P19Rik|Slil3|mKIAA4141|slit-2	slit homolog 2 (Drosophila)	protein-coding
unique_peak2-33342-8-16--1.08224042330277-0.891319708951328	chr11	22981821	22982458	+	0	NA	Intergenic	B3|SINE|B2	68752	NM_028672	73873	Mm.252406	NM_028672	ENSMUSG00000049811	Fam161a	4930430E16Rik	family with sequence similarity 161, member A	protein-coding
unique_peak1-5587-9-1-2.18961340640422-2.31132995230379	chr5	151182827	151183318	+	0	NA	intron (NM_172887, intron 15 of 60)	B2_Mm1t|SINE|B2	120567	NM_172887	320365	Mm.216590	NM_172887	ENSMUSG00000056602	Fry	13CDNA73|9330186A19Rik|AF346502|AI462658|C87180|D930046M03|cg003|mKIAA4143	furry homolog (Drosophila)	protein-coding
common_peak1-19426-12-7-0.648775985087639-0.697979855752659	chrX	75155327	75155869	+	0	NA	Intergenic	MusHAL1|LINE|L1	45501	NM_001085544	628923	Mm.79600	NM_001085544	ENSMUSG00000079522	Gm14744	OTTMUSG00000017866|Obp1f	predicted gene 14744	protein-coding
common_peak2-29377-12-5-1.06381348436648-1.78669045979184	chr6	7847906	7848297	+	0	NA	Intergenic	ORR1A3-int|LTR|MaLR	52877	NM_052993	94192	Mm.102752	NM_052993	ENSMUSG00000042460	C1galt1	2210410E06Rik|AV284120|T-synthase	core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1	protein-coding
common_peak2-30942-7-16--1.28837201095215-1.08658567012551	chr8	13286994	13287854	+	0	NA	promoter-TSS (NM_172282)	promoter-TSS (NM_172282)	-589	NM_172282	234076	Mm.219813	NM_172282	ENSMUSG00000038497	Tmco3	B230339H12Rik|C87304	transmembrane and coiled-coil domains 3	protein-coding
common_peak1-7508-9-25--1.51082631173687-2.00244947055753	chr1	16518693	16519196	+	0	NA	Intergenic	L1Md_T|LINE|L1	-9561	NM_001111272	29819	Mm.216257	NM_025303	ENSMUSG00000025920	Stau2	-	staufen (RNA binding protein) homolog 2 (Drosophila)	protein-coding
common_peak1-16291-65-90--0.0156287007215692-0.301029995663933	chr5	112323827	112325844	+	0	NA	Intergenic	Intergenic	-134087	NR_045833	269683	Mm.136946	NM_207252	ENSMUSG00000085271	E130006D01Rik	Gm16018|Gm681|OTTMUSG00000029083	RIKEN cDNA E130006D01 gene	ncRNA
unique_peak1-2873-19-6-1.59533240460408-2.21753093801298	chr17	35555580	35556417	+	0	NA	Intergenic	RMER17A|LTR|ERVK	-5794	NM_023124	15019	Mm.486287	NM_023124		H2-Q8	H-2Q8|MMS10-T|Ms10t|Qa-2|Qa-8|Qa8	histocompatibility 2, Q region locus 8	protein-coding
unique_peak1-2288-17-6-1.41094141614743-1.84350559086818	chr15	80034756	80035593	+	0	NA	intron (NM_010795, intron 1 of 1)	intron (NM_010795, intron 1 of 1)	-29336	NM_178719	239555	Mm.307163	NM_178719	ENSMUSG00000022412	Mief1	A230016E22|AI452372|Smcr7l	mitochondrial elongation factor 1	protein-coding
unique_peak2-39126-7-11--0.785871670422967-1.21681515183528	chr8	84023475	84024046	+	0	NA	intron (NM_001297596, intron 2 of 24)	intron (NM_001297596, intron 2 of 24)	157299	NM_001297593	234515	Mm.324468	NM_001024617	ENSMUSG00000037940	Inpp4b	E130107I17Rik	inositol polyphosphate-4-phosphatase, type II	protein-coding
common_peak1-14693-8-11--0.579740082773585-1.14218153353838	chr3	67429960	67430513	+	0	NA	Intergenic	Lx2|LINE|L1	43546	NM_025813	66868	Mm.491153	NM_025813	ENSMUSG00000027775	Mfsd1	1200003O06Rik	major facilitator superfamily domain containing 1	protein-coding
common_peak1-10324-46-69--0.231287073696165-0.437489091603667	chr13	73330492	73331976	+	0	NA	Intergenic	MTE-int|LTR|MaLR	-66711	NM_018885	50916	Mm.103784	NM_018885	ENSMUSG00000021604	Irx4	-	Iroquois related homeobox 4 (Drosophila)	protein-coding
common_peak1-11819-97-139-0.0547180545473154-0.328557750266424	chr16	76371967	76373848	+	0	NA	intron (NM_173440, intron 1 of 3)	CpG	387	NM_173440	268903	Mm.74711	NM_173440	ENSMUSG00000048490	Nrip1	6030458L20Rik|8430438I05Rik|9630050P12|AA959574|AW456757|RIP140	nuclear receptor interacting protein 1	protein-coding
common_peak2-21791-17-19--0.103631756682325-0.301029995663974	chr11	117968265	117969227	+	0	NA	intron (NM_001167746, intron 18 of 80)	intron (NM_001167746, intron 18 of 80)	21787	NM_001167746	69926	Mm.473893	NM_001167746	ENSMUSG00000033987	Dnah17	2810003K23Rik|Dnahc17|Dnahcl1|Gm1178|mKIAA3028	dynein, axonemal, heavy chain 17	protein-coding
common_peak2-30226-55-85--0.221644883549396-0.466412485092343	chr7	3645117	3646135	+	0	NA	promoter-TSS (NM_024168)	promoter-TSS (NM_024168)	414	NM_001164205	66078	Mm.379100	NM_024168	ENSMUSG00000035585	Tsen34	0610027F08Rik|Leng5	tRNA splicing endonuclease 34 homolog (S. cerevisiae)	protein-coding
common_peak1-10273-189-263-0.298269368748329-1.72325388425595	chr13	58127174	58130057	+	0	NA	intron (NM_001195075, intron 10 of 16)	intron (NM_001195075, intron 10 of 16)	-4054	NR_030544	100124491		NR_030544		Mir874	Mirn874|mmu-mir-874	microRNA 874	ncRNA
common_peak1-8580-16-16-0.0308008010177225-0.307611222530525	chr10	99211574	99212166	+	0	NA	Intergenic	Intergenic	10422	NM_027945	71832	Mm.483162	NM_027945	ENSMUSG00000046934	Csl	1700007H16Rik	citrate synthase like	protein-coding
unique_peak1-1839-49-4-3.68435572813782-14.1642219370712	chr14	43277269	43279116	+	0	NA	Intergenic	Intergenic	98550	NM_001244671	100042055	Mm.429109	NM_001244671	ENSMUSG00000095226	Gm10377	ENSMUSG00000072606	predicted gene 10377	protein-coding
unique_peak1-2661-9-1-2.18961340640422-2.31132995230379	chr16	52442643	52443158	+	0	NA	intron (NM_009655, intron 1 of 15)	intron (NM_009655, intron 1 of 15)	10210	NM_009655	11658	Mm.288282	NM_009655	ENSMUSG00000022636	Alcam	AI853494|BEN|CD166|DM-GRASP|MuSC|SC1	activated leukocyte cell adhesion molecule	protein-coding
unique_peak2-32757-12-25--1.05166373305345-1.1381569562463	chr1	170254930	170255808	+	0	NA	intron (NM_001291508, intron 2 of 7)	(CA)n|Simple_repeat|Simple_repeat	106931	NM_001291508	18514	Mm.43358	NM_008783	ENSMUSG00000052534	Pbx1	2310056B04Rik|D230003C07Rik|Pbx-1	pre B cell leukemia homeobox 1	protein-coding
unique_peak1-3681-11-4-1.18676548936425-1.68134727924692	chr19	42135030	42135599	+	0	NA	intron (NM_026152, intron 3 of 6)	intron (NM_026152, intron 3 of 6)	8596	NM_025752	66765	Mm.440412	NM_025752	ENSMUSG00000090369	4933411K16Rik	-	RIKEN cDNA 4933411K16 gene	protein-coding
common_peak1-15472-12-5-1.06381348436648-1.78669045979184	chr4	107313862	107314470	+	0	NA	Intergenic	Intergenic	42601	NM_019872	56296	Mm.141324	NM_019872	ENSMUSG00000028610	Dmrtb1	Dmrt6|Prp13	DMRT-like family B with proline-rich C-terminal, 1	protein-coding
common_peak2-30195-13-16--0.30899081061257-0.330004445983672	chr7	44892026	44892733	+	0	NA	Intergenic	Intergenic	1627525	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak2-35158-6-5--0.0195643903408542-0.947717972411649	chr16	33891171	33891608	+	0	NA	intron (NM_010580, intron 5 of 14)	intron (NM_010580, intron 5 of 14)	61638	NM_001145884	16419	Mm.6424	NM_010580	ENSMUSG00000022817	Itgb5	AA475909|AI874634|ESTM23|[b]-5|[b]5|[b]5A|[b]5B|beta-5|beta5	integrin beta 5	protein-coding
common_peak2-29515-10-13--0.450939577048835-0.386243247519795	chr6	34796453	34797165	+	0	NA	exon (NM_001289656, exon 19 of 20)	exon (NM_001289656, exon 19 of 20)	-16337	NM_197986	68487	Mm.248440	NM_197986	ENSMUSG00000057137	Tmem140	1110007F12Rik	transmembrane protein 140	protein-coding
common_peak1-11985-22-25--0.0531556130536872-0.301029995663976	chr17	12094221	12095405	+	0	NA	intron (NM_016694, intron 9 of 11)	intron (NM_016694, intron 9 of 11)	-18758	NR_045808	52027	Mm.442257	NR_045808		D17Ertd648e	-	DNA segment, Chr 17, ERATO Doi 648, expressed	ncRNA
common_peak2-29144-56-59-0.328705229830724-0.716869875017263	chr5	125405895	125407295	+	0	NA	Intergenic	RSINE1|SINE|B4	63520	NM_001081750	269704	Mm.138617	NM_001081750	ENSMUSG00000079215	Zfp664	AW060232|D930038J03Rik|ZFOC1|Znf664	zinc finger protein 664	protein-coding
common_peak1-13060-13-18--0.469455482805817-0.409888142029227	chr19	6118480	6119243	+	0	NA	promoter-TSS (NM_133678)	promoter-TSS (NM_133678)	-275	NM_133678	66406	Mm.303924	NM_133678	ENSMUSG00000024790	Sac3d1	2410004C24Rik|AU015683|shd1	SAC3 domain containing 1	protein-coding
common_peak1-9863-12-15--0.351224014912361-0.332077462497413	chr12	80365194	80365914	+	0	NA	intron (NM_001008550, intron 23 of 41)	B3|SINE|B2	31715	NM_001008550	211978	Mm.297919	NM_001008550	ENSMUSG00000066440	Zfyve26	4930465A13|9330197E15Rik|A630028O16Rik|Gm893|mKIAA0321	zinc finger, FYVE domain containing 26	protein-coding
unique_peak2-35532-9-14--0.717277189204299-0.53895475198017	chr17	56005156	56005761	+	0	NA	exon (NM_144546, exon 4 of 4)	exon (NM_144546, exon 4 of 4)	12760	NM_144546	104349	Mm.460659	NM_144546		Zfp119a	AL024077|Mzf13|Zfp119	zinc finger protein 119a	protein-coding
unique_peak2-35322-3-11--1.99894559068043-1.95434855131066	chr17	17345980	17346195	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	87740	NM_011765	22759	Mm.436633	NM_011765	ENSMUSG00000095990	Zfp97	NGD16-4	zinc finger protein 97	protein-coding
unique_peak2-33341-6-6--0.241956811677302-0.947717972411649	chr11	22981279	22981745	+	0	NA	Intergenic	B2_Mm2|SINE|B2	68125	NM_028672	73873	Mm.252406	NM_028672	ENSMUSG00000049811	Fam161a	4930430E16Rik	family with sequence similarity 161, member A	protein-coding
common_peak1-14739-34-16-1.29460568575093-2.92433603673115	chr3	86461977	86462998	+	0	NA	intron (NM_030695, intron 46 of 56)	intron (NM_030695, intron 46 of 56)	-110282	NM_011839	23937	Mm.389466	NM_011839	ENSMUSG00000057777	Mab21l2	-	mab-21-like 2 (C. elegans)	protein-coding
common_peak2-32018-19-34--0.72659569028328-0.974620203848502	chr9	75379036	75379798	+	0	NA	intron (NM_016963, intron 2 of 9)	intron (NM_016963, intron 2 of 9)	28047	NM_016963	50875	Mm.38445	NM_016963	ENSMUSG00000058587	Tmod3	U-Tmod|UTMOD	tropomodulin 3	protein-coding
unique_peak2-39402-5-9--1.02630843089322-1.21398586181642	chr9	31386133	31386606	+	0	NA	Intergenic	Intergenic	-114546	NM_144936	235135	Mm.390134	NM_144936	ENSMUSG00000041737	Tmem45b	BC018222	transmembrane protein 45b	protein-coding
unique_peak2-33498-4-8--1.19338551529556-1.21878474469819	chr11	72576047	72576394	+	0	NA	intron (NM_009671, intron 23 of 24)	ORR1B1|LTR|MaLR	33121	NM_001024926	192986	Mm.194755	NM_001024926	ENSMUSG00000057778	Cyb5d2	9330151E16Rik|Gm2	cytochrome b5 domain containing 2	protein-coding
common_peak2-31862-25-33--0.225612935905233-0.357106932979091	chr9	51008276	51009093	+	0	NA	Intergenic	Intergenic	-13111	NM_011136	18985	Mm.897	NM_011136	ENSMUSG00000032053	Pou2af1	BOB.1|Bob-1|Bob1|OBF-1|OBF.1|OCA-B|OCAB	POU domain, class 2, associating factor 1	protein-coding
unique_peak2-37629-0-6--3.64748585253182-1.56314192529759	chr5	67427393	67427711	+	0	NA	intron (NM_001001980, intron 23 of 25)	intron (NM_001001980, intron 23 of 25)	62813	NM_008888	18935	Mm.62505	NM_008888	ENSMUSG00000012520	Phox2b	Dilp1|NBPhox|Pmx2b	paired-like homeobox 2b	protein-coding
common_peak2-29077-62-63-0.410751458802085-1.01379877677007	chr5	118464651	118466640	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-12188	NM_021344	57816	Mm.273285	NM_021344	ENSMUSG00000029359	Tesc	1010001A17Rik|2410011K10Rik|TE-1	tescalcin	protein-coding
unique_peak1-2464-6-3-0.565398110380302-1.08602067057793	chr16	4603835	4604140	+	0	NA	intron (NM_031184, intron 1 of 6)	intron (NM_031184, intron 1 of 6)	9274	NM_031184	83396	Mm.134072	NM_031184	ENSMUSG00000014303	Glis2	Gli5|Klf16|Nkl	GLIS family zinc finger 2	protein-coding
unique_peak1-938-10-4-1.03448725012141-1.5150158574804	chr11	54056114	54056632	+	0	NA	Intergenic	Intergenic	7028	NM_009969	12981	Mm.4922	NM_009969		Csf2	Csfgm|GMCSF|Gm-CSf|MGI-IGM	colony stimulating factor 2 (granulocyte-macrophage)	protein-coding
common_peak1-8728-30-20-0.777357986713112-1.30767018140166	chr11	120520358	120521876	+	0	NA	intron (NM_175263, intron 2 of 11)	intron (NM_175263, intron 2 of 11)	1034	NM_175263	77583	Mm.32839	NM_175263	ENSMUSG00000042988	Notum	5730593N15Rik	notum pectinacetylesterase homolog (Drosophila)	protein-coding
unique_peak2-36775-2-4--1.23938235115068-0.931118710592187	chr3	69047431	69047701	+	0	NA	Intergenic	Intergenic	21225	NM_027843	71619	Mm.98122	NM_027843	ENSMUSG00000098207	Arl14	9130014L17Rik|Arf7	ADP-ribosylation factor-like 14	protein-coding
common_peak1-13817-30-35--0.000249591950439054-0.304088508634279	chr2	52424273	52425048	+	0	NA	intron (NM_001037099, intron 2 of 13)	intron (NM_001037099, intron 2 of 13)	-10529	NM_001285427	12298	Mm.330223	NM_146123	ENSMUSG00000017412	Cacnb4	3110038O15Rik|Cchb4|lh	calcium channel, voltage-dependent, beta 4 subunit	protein-coding
unique_peak1-5704-8-2-1.42025991722641-1.65811743852845	chr6	37326548	37327023	+	0	NA	intron (NM_178661, intron 2 of 11)	intron (NM_178661, intron 2 of 11)	65363	NM_178661	208647	Mm.169929	NM_178661		Creb3l2	BBF2H7|C530025K05Rik|SCIRR69	cAMP responsive element binding protein 3-like 2	protein-coding
common_peak1-12691-29-69--1.01699293632986-2.75965107077516	chr18	39489334	39490634	+	0	NA	intron (NM_175164, intron 20 of 22)	intron (NM_175164, intron 20 of 22)	156915	NM_008173	14815	Mm.129481	NM_008173	ENSMUSG00000024431	Nr3c1	GR|Grl-1|Grl1	nuclear receptor subfamily 3, group C, member 1	protein-coding
common_peak2-24934-70-102--0.0665336108078201-0.318402933244072	chr17	88629086	88631226	+	0	NA	Intergenic	Intergenic	105304	NM_001190356	225058	Mm.312053	NM_001190356		Gm4832	EG225058	predicted gene 4832	protein-coding
common_peak1-7787-28-38--0.232443099040786-0.377553616161376	chr1	97976388	97977770	+	0	NA	Intergenic	Intergenic	-58744	NR_040467	73454	Mm.396229	NR_040467		1700063A18Rik	-	RIKEN cDNA 1700063A18 gene	ncRNA
unique_peak2-35416-8-31--1.99477758205243-3.44661255732379	chr17	33919600	33920262	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-1411	NM_020581	57875	Mm.196189	NM_020581		Angptl4	Arp4|Bk89|Fiaf|Hfarp|Ng27|Pgar|Pgarg|Pp1158	angiopoietin-like 4	protein-coding
unique_peak2-37813-3-7--1.41398308995928-1.23214870625617	chr5	124025853	124026254	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-3029	NM_029929	77573	Mm.41372	NM_029929	ENSMUSG00000029434	Vps33a	3830421M04Rik|AI503300|AW048546|AW554476|bf	vacuolar protein sorting 33A (yeast)	protein-coding
unique_peak2-37920-2-6--1.72480917832092-1.26211192963361	chr5	144934174	144934598	+	0	NA	intron (NM_001081109, intron 10 of 13)	intron (NM_001081109, intron 10 of 13)	-16769	NM_010800	17341	Mm.386767	NM_010800	ENSMUSG00000052271	Bhlha15	1810009C13Rik|Bhlhb8|MIST-1|Mist1	basic helix-loop-helix family, member a15	protein-coding
unique_peak1-2-10-0-3.35641534500877-3.31132995230379	chr1	74317426	74317984	+	0	NA	Intergenic	PB1D7|SINE|Alu	-7469	NM_174985	227289	Mm.246587	NM_174985	ENSMUSG00000064272	Gpbar1	BG37|GPCR|GPR131|M-BAR|TGR5	G protein-coupled bile acid receptor 1	protein-coding
common_peak1-18455-10-12--0.344024373132323-0.340565874754526	chr8	83996467	83997090	+	0	NA	intron (NM_001297596, intron 2 of 24)	intron (NM_001297596, intron 2 of 24)	130317	NM_001297593	234515	Mm.324468	NM_001024617	ENSMUSG00000037940	Inpp4b	E130107I17Rik	inositol polyphosphate-4-phosphatase, type II	protein-coding
common_peak2-22734-13-18--0.469455482805817-0.409888142029227	chr13	109230323	109231054	+	0	NA	Intergenic	Intergenic	124157	NM_178683	218581	Mm.32318	NM_178683	ENSMUSG00000021697	Depdc1b	9830132O03|AW260467|XTP1	DEP domain containing 1B	protein-coding
unique_peak2-35247-4-9--1.34538860874061-1.36011389749466	chr16	97716134	97716614	+	0	NA	intron (NM_020622, intron 2 of 7)	intron (NM_020622, intron 2 of 7)	10169	NM_020622	52793	Mm.327932	NM_020622	ENSMUSG00000022938	Fam3b	2-21|9030624C24Rik|D16Jhu19e|ORF9|Pander	family with sequence similarity 3, member B	protein-coding
common_peak2-26015-17-10-0.75886471956774-0.917676348953458	chr19	57359805	57360331	+	0	NA	Intergenic	Intergenic	11618	NR_045319	78120	Mm.445892	NR_045319		4930449E18Rik	-	RIKEN cDNA 4930449E18 gene	ncRNA
unique_peak2-34141-8-37--2.24270509549601-4.70100036706703	chr13	23684207	23684841	+	0	NA	intron (NM_001177653, intron 1 of 1)	intron (NM_001177653, intron 1 of 1)	-6685	NM_001290530	319179	Mm.440391	NM_178194	ENSMUSG00000047246	Hist1h2be	-	histone cluster 1, H2be	protein-coding
common_peak1-14602-11-8-0.338768582809301-1.14218153353838	chr3	51660024	51660497	+	0	NA	exon (NM_001004176, exon 2 of 5)	exon (NM_001004176, exon 2 of 5)	195145	NM_174995	211666	Mm.24679	NM_174995	ENSMUSG00000074604	Mgst2	GST2|MGST-II	microsomal glutathione S-transferase 2	protein-coding
unique_peak2-37963-5-10--1.16381195464315-1.33892459842472	chr6	51544038	51544481	+	0	NA	Intergenic	Intergenic	49737	NM_001127348	71982	Mm.294166	NM_028035	ENSMUSG00000038301	Snx10	2410004M09Rik	sorting nexin 10	protein-coding
common_peak1-14833-46-62--0.0792839802511152-0.30814989626076	chr3	92245274	92247047	+	0	NA	Intergenic	Lx7|LINE|L1	-3459	NM_009265	20754	Mm.140151	NM_009265	ENSMUSG00000048455	Sprr1b	-	small proline-rich protein 1B	protein-coding
unique_peak1-1242-9-5-0.604650905683064-1.21398586181642	chr11	114676563	114676989	+	0	NA	Intergenic	Intergenic	16538	NM_181749	217302	Mm.269127	NM_181749	ENSMUSG00000034677	Gpr142	PGR2	G protein-coupled receptor 142	protein-coding
common_peak1-8825-44-53-0.067005332405067-0.332622013471003	chr11	22990180	22991309	+	0	NA	Intergenic	RSINE1|SINE|B4	77357	NM_028672	73873	Mm.252406	NM_028672	ENSMUSG00000049811	Fam161a	4930430E16Rik	family with sequence similarity 161, member A	protein-coding
common_peak2-28404-15-7-1.01216475055566-1.08658567012551	chr4	141139401	141139785	+	0	NA	intron (NM_133754, intron 6 of 8)	intron (NM_133754, intron 6 of 8)	16246	NM_001163256	74202	Mm.490327	NM_133754	ENSMUSG00000006219	Fblim1	2410043F08Rik|Cal|Fblp1|Gt10|migfilin|migfilin(s)	filamin binding LIM protein 1	protein-coding
common_peak2-19669-70-85-0.193702161673301-0.501733885083321	chr1	55026576	55027474	+	0	NA	Intergenic	Intergenic	-43794	NM_001081433	329154	Mm.397910	NM_001081433	ENSMUSG00000052331	Ankrd44	4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B	ankyrin repeat domain 44	protein-coding
common_peak2-25826-27-5-2.40658345017408-5.07532537266956	chr19	38603162	38603556	+	0	NA	intron (NM_019588, intron 1 of 31)	B2_Mm2|SINE|B2	4672	NM_019588	74055	Mm.34031	NM_019588	ENSMUSG00000024998	Plce1	4933403A21Rik|PLCepsilon|Plce|mKIAA1516	phospholipase C, epsilon 1	protein-coding
unique_peak1-2883-13-1-2.77847203063777-3.64038867156802	chr17	40869499	40869958	+	0	NA	TTS (NM_001038500)	TTS (NM_001038500)	5659	NM_001038500	619517	Mm.391018	NM_001038500	ENSMUSG00000073396	Esp1	EG619517|Gm6084	exocrine gland secreted peptide 1	protein-coding
unique_peak1-6928-14-5-1.31425365963649-1.4372489031793	chr8	107139317	107139952	+	0	NA	intron (NM_001252627, intron 15 of 16)	MTB|LTR|MaLR	8662	NM_007663	12556	Mm.19423	NM_007663	ENSMUSG00000031881	Cdh16	-	cadherin 16	protein-coding
common_peak1-15085-16-35--1.05166135917425-1.68242911687175	chr3	127895441	127896193	+	0	NA	intron (NR_045704, intron 2 of 5)	intron (NR_045704, intron 2 of 5)	38706	NR_045704	402774	Mm.209170	NR_045704		D030025E07Rik	-	RIKEN cDNA D030025E07 gene	ncRNA
common_peak1-10369-11-7-0.508693584251613-1.21681515183528	chr13	92274833	92275438	+	0	NA	intron (NM_009027, intron 9 of 23)	intron (NM_009027, intron 9 of 23)	-258645	NM_198415	76722	Mm.316438	NM_198415	ENSMUSG00000021622	Ckmt2	2300008A19Rik|ScCKmit	creatine kinase, mitochondrial 2	protein-coding
common_peak1-7895-36-36-0.269867720538804-0.51862626278861	chr1	135283227	135284252	+	0	NA	exon (NM_011439, exon 8 of 14)	exon (NM_011439, exon 8 of 14)	23590	NM_175443	214253	Mm.52111	NM_175443	ENSMUSG00000070644	Etnk2	4933417N20Rik|AI197444|EKI 2|Eki2|Tuc1	ethanolamine kinase 2	protein-coding
unique_peak2-38245-0-5--3.42509343119537-1.32905871926422	chr6	124474981	124475374	+	0	NA	Intergenic	Intergenic	12538	NM_023143	50909	Mm.333375	NM_023143	ENSMUSG00000055172	C1ra	AI132558|C1r|mC1rA	complement component 1, r subcomponent A	protein-coding
common_peak2-20470-15-9-0.690236655668294-0.732381977911291	chr10	43977710	43978180	+	0	NA	Intergenic	MYSERV6-int|LTR|ERVK	-10219	NM_053069	11793	Mm.22264	NM_053069	ENSMUSG00000038160	Atg5	2010107M05Rik|3110067M24Rik|AW319544|Apg5l|Atg5l|C88337|Paddy	autophagy related 5	protein-coding
common_peak2-22186-23-38--0.563634714353168-0.792515101870073	chr12	105784714	105785611	+	0	NA	Intergenic	Intergenic	-73716	NM_010351	14836	Mm.129	NM_010351	ENSMUSG00000021095	Gsc	-	goosecoid homeobox	protein-coding
common_peak2-32133-9-9--0.132314688483142-1.03275496310833	chr9	106360721	106361106	+	0	NA	intron (NM_021567, intron 1 of 12)	intron (NM_021567, intron 1 of 12)	4744	NM_021567	59092	Mm.286394	NM_021567	ENSMUSG00000023495	Pcbp4	1200003L19Rik|AlphaCP-4	poly(rC) binding protein 4	protein-coding
common_peak2-27788-16-25--0.58217607587303-0.633951497070961	chr3	137918452	137919176	+	0	NA	Intergenic	Intergenic	-16187	NR_045760	68369	Mm.441136	NR_045760	ENSMUSG00000099146	0610031O16Rik	-	RIKEN cDNA 0610031O16 gene	ncRNA
common_peak2-28622-29-60--0.818447256947776-1.74659365657992	chr5	25222711	25223346	+	0	NA	Intergenic	ORR1E|LTR|MaLR	-11413	NM_020570	57434	Mm.143767	NM_020570	ENSMUSG00000028933	Xrcc2	4921524O04Rik|8030409M04Rik|RAD51|RecA	X-ray repair complementing defective repair in Chinese hamster cells 2	protein-coding
unique_peak2-37694-1-5--2.2120195109379-1.32905871926422	chr5	100417104	100417297	+	0	NA	Intergenic	MMERVK10C-int|LTR|ERVK	-9243	NM_001077265	11991	Mm.150231	NM_007516		Hnrnpd	Auf1|Hnrpd	heterogeneous nuclear ribonucleoprotein D	protein-coding
common_peak2-20537-17-26--0.53659116395843-0.538442145997695	chr10	66864119	66865196	+	0	NA	Intergenic	Intergenic	-116628	NM_001036293	641340	Mm.136223	NM_001036293	ENSMUSG00000075000	Nrbf2	NRBF-2	nuclear receptor binding factor 2	protein-coding
common_peak2-26994-10-6-0.549060422951165-1.21398586181642	chr2	168525433	168525809	+	0	NA	intron (NM_001289446, intron 4 of 27)	intron (NM_001289446, intron 4 of 27)	34218	NM_001289445	11981	Mm.330819	NM_015731	ENSMUSG00000027546	Atp9a	IIa	ATPase, class II, type 9A	protein-coding
common_peak2-24617-12-16--0.4386868561627-0.368541233333383	chr17	33915921	33916518	+	0	NA	intron (NM_020581, intron 3 of 6)	intron (NM_020581, intron 3 of 6)	2301	NM_020581	57875	Mm.196189	NM_020581		Angptl4	Arp4|Bk89|Fiaf|Hfarp|Ng27|Pgar|Pgarg|Pp1158	angiopoietin-like 4	protein-coding
common_peak2-25030-2-7--1.91745425626332-1.45399745587252	chr18	25486721	25487134	+	0	NA	intron (NM_001033532, intron 6 of 10)	intron (NM_001033532, intron 6 of 10)	159406	NM_001033532	225289	Mm.391081	NM_001033532	ENSMUSG00000033632	AW554918	4921538P22|AI461742|Kiaa1328|mKIAA1328	expressed sequence AW554918	protein-coding
unique_peak2-39820-4-6--0.830815435910851-0.989110657569874	chrX	37191231	37191634	+	0	NA	Intergenic	L1_Mus1|LINE|L1	25349	NM_001191032	100504400	Mm.373409	NM_001191032	ENSMUSG00000095240	Cypt14	-	cysteine-rich perinuclear theca 14	protein-coding
unique_peak2-35647-8-8--0.164702583494742-1.00793137938329	chr18	53755676	53756137	+	0	NA	Intergenic	Intergenic	-51899	NR_040349	100502945	Mm.376937	NR_040349		Gm19466	-	predicted gene, 19466	ncRNA
common_peak2-29174-8-10--0.454209200689727-1.078512453669	chr5	134644319	134644737	+	0	NA	intron (NM_033572, intron 3 of 10)	intron (NM_033572, intron 3 of 10)	8109	NM_033572	94254	Mm.29508	NM_033572	ENSMUSG00000061979	Wbscr16	5730496C04Rik|AU019812	Williams-Beuren syndrome chromosome region 16 homolog (human)	protein-coding
unique_peak2-33149-6-13--1.2419568116773-1.58711810488664	chr10	86704663	86705082	+	0	NA	Intergenic	URR1B|DNA|MER1_type	184081	NM_029685	76640	Mm.78423	NM_029685	ENSMUSG00000047129	1700113H08Rik	-	RIKEN cDNA 1700113H08 gene	protein-coding
unique_peak2-32898-9-15--0.81038659359578-0.630231561310125	chr10	18234604	18235332	+	0	NA	intron (NM_173390, intron 4 of 6)	ID4|SINE|ID	30914	NM_019487	56016	Mm.35551	NM_019487	ENSMUSG00000019853	Hebp2	SOUL	heme binding protein 2	protein-coding
common_peak2-24824-21-43--0.889942353371062-1.48724131519613	chr17	71474927	71476108	+	0	NA	exon (NM_010867, exon 38 of 38)	exon (NM_010867, exon 38 of 38)	-57801	NM_022882	64898	Mm.227924	NM_022882	ENSMUSG00000024052	Lpin2	2610511G02Rik|AI481352|AW742896	lipin 2	protein-coding
common_peak2-32122-50-68--0.0675841402992168-0.307512243540658	chr9	103364248	103365795	+	0	NA	intron (NM_001002896, intron 1 of 6)	intron (NM_001002896, intron 1 of 6)	17637	NM_001002896	107993	Mm.335403	NM_001002896	ENSMUSG00000032556	Bfsp2	AI448593|CP49	beaded filament structural protein 2, phakinin	protein-coding
unique_peak2-32818-7-4-0.477162735410827-1.09384600808989	chr1	185736560	185736898	+	0	NA	Intergenic	Intergenic	121148	NM_028516	73363	Mm.50115	NM_028516	ENSMUSG00000044854	1700056E22Rik	-	RIKEN cDNA 1700056E22 gene	protein-coding
unique_peak2-34030-7-10--0.660340788339108-1.12966497611638	chr12	111814134	111814678	+	0	NA	intron (NM_012023, intron 13 of 13)	PB1D10|SINE|Alu	-15178	NR_033340	319786	Mm.129691	NR_033340		B930059L03Rik	-	RIKEN cDNA B930059L03 gene	ncRNA
common_peak2-24169-7-4-0.477162735410827-1.09384600808989	chr16	45840155	45840577	+	0	NA	intron (NM_153412, intron 1 of 17)	(TCTCTG)n|Simple_repeat|Simple_repeat	4125	NM_153412	208177	Mm.211477	NM_153412	ENSMUSG00000033149	Phldb2	AV253284|C820004H04Rik|LL5b|LL5beta	pleckstrin homology-like domain, family B, member 2	protein-coding
common_peak2-23877-45-37-0.612430511901287-1.31742449843083	chr16	4586999	4588270	+	0	NA	Intergenic	Intergenic	-7079	NM_031184	83396	Mm.134072	NM_031184	ENSMUSG00000014303	Glis2	Gli5|Klf16|Nkl	GLIS family zinc finger 2	protein-coding
unique_peak2-37451-2-11--2.50241675698448-2.32232533660526	chr4	156236045	156236611	+	0	NA	Intergenic	Intergenic	-627362	NM_198305	231003	Mm.423038	NM_198305	ENSMUSG00000078484	Klhl17	AL022703|BC058738	kelch-like 17	protein-coding
unique_peak2-38878-11-8-0.338768582809301-1.14218153353838	chr8	70352701	70353298	+	0	NA	intron (NM_177698, intron 8 of 14)	intron (NM_177698, intron 8 of 14)	-10805	NM_027626	234353	Mm.32525	NM_027626	ENSMUSG00000030465	Psd3	4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D	pleckstrin and Sec7 domain containing 3	protein-coding
unique_peak1-730-11-1-2.50869358425161-2.83420869758413	chr10	96757059	96757622	+	0	NA	Intergenic	Intergenic	-128772	NR_039547	100628616		NR_039547		Mir3966	mmu-mir-3966|mu-mir-3966	microRNA 3966	ncRNA
common_peak1-13406-18-22--0.210642804828661-0.321718508207525	chr19	47865172	47865864	+	0	NA	intron (NM_027559, intron 12 of 37)	intron (NM_027559, intron 12 of 37)	46333	NM_027559	100048534	Mm.29457	NM_027559	ENSMUSG00000044948	Cfap43	4632415N18Rik|4930428C11Rik|4930463G05Rik|AI429486|D19Ertd652e|Wdr96	cilia and flagella associated protein 43	protein-coding
common_peak2-31335-20-16-0.400611943340854-0.507611860039817	chr8	83715182	83715715	+	0	NA	Intergenic	MMERVK10C-int|LTR|ERVK	-151013	NM_001024617	234515	Mm.324468	NM_001024617	ENSMUSG00000037940	Inpp4b	E130107I17Rik	inositol polyphosphate-4-phosphatase, type II	protein-coding
unique_peak2-37367-1-10--3.08648862885404-2.57096726280955	chr4	136286101	136286591	+	0	NA	intron (NM_010142, intron 3 of 15)	intron (NM_010142, intron 3 of 15)	105580	NM_001290753	13844	Mm.250981	NM_010142	ENSMUSG00000028664	Ephb2	Cek5|Drt|ETECK|Erk|Hek5|Nuk|Prkm5|Qek5|Sek3|Tyro5	Eph receptor B2	protein-coding
common_peak1-8336-8-17--1.16470258349474-1.02063122982878	chr10	44079474	44079803	+	0	NA	TTS (NR_035450)	TTS (NR_035450)	156	NR_035450	100316688		NR_035450		Mir1929	mmu-mir-1929	microRNA 1929	ncRNA
common_peak1-13989-12-14--0.25811461052088-0.309074325783021	chr2	103285834	103286614	+	0	NA	intron (NM_010125, intron 4 of 6)	L2a|LINE|L2	21999	NM_010125	13711	Mm.20888	NM_010125	ENSMUSG00000027186	Elf5	ESE-2|ESE-5|ESE-5.	E74-like factor 5	protein-coding
unique_peak1-524-7-2-1.21412832957703-1.45399745587252	chr1	184280255	184280667	+	0	NA	Intergenic	Intergenic	-8724	NM_175127	67948	Mm.30737	NM_175127	ENSMUSG00000047539	Fbxo28	4833428J17Rik|5730505P19Rik|D1Ertd578e|Fbx28|mKIAA0483	F-box protein 28	protein-coding
common_peak2-30636-11-11--0.0762689164695427-0.301029995663976	chr7	98162405	98162972	+	0	NA	Intergenic	Lx2A1|LINE|L1	-76608	NM_011807	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
common_peak1-13490-48-43-0.511495532597517-1.12538602347823	chr2	31571873	31573397	+	0	NA	intron (NM_001283047, intron 2 of 11)	intron (NM_001283047, intron 2 of 11)	28578	NM_001283046	11350	Mm.1318	NM_009594	ENSMUSG00000026842	Abl1	AI325092|Abl|E430008G22Rik|c-Abl	c-abl oncogene 1, non-receptor tyrosine kinase	protein-coding
unique_peak1-3970-8-1-2.00522241794757-2.05605744720049	chr2	32159677	32160061	+	0	NA	intron (NM_001080968, intron 18 of 25)	intron (NM_001080968, intron 18 of 25)	-14111	NR_029811	387239		NR_029811	miRBase:MI0000714	Mir199b	Mirn199b	microRNA 199b	ncRNA
unique_peak2-33386-9-9--0.132314688483142-1.03275496310833	chr11	49088364	49088725	+	0	NA	Intergenic	URR1B|DNA|MER1_type	-5108	NM_146471	258463	Mm.377517	NM_146471	ENSMUSG00000059864	Olfr1393	MOR256-24	olfactory receptor 1393	protein-coding
common_peak2-23380-8-7-0.00522241794757061-1.00793137938329	chr15	57761235	57761617	+	0	NA	intron (NM_001081396, intron 4 of 20)	intron (NM_001081396, intron 4 of 20)	17672	NM_001167679	210544	Mm.390835	NM_199300	ENSMUSG00000022364	Tbc1d31	4B3|D330013L20Rik|Gm85|Wdr67	TBC1 domain family, member 31	protein-coding
common_peak2-28803-5-8--0.874305337448166-1.10484139239135	chr5	64809769	64810199	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	49197	NR_040681	69999	Mm.261413	NR_040681		1700027F09Rik	-	RIKEN cDNA 1700027F09 gene	ncRNA
common_peak2-28656-19-26--0.352200175501782-0.416752705545949	chr5	31193325	31194137	+	0	NA	intron (NM_174849, intron 4 of 10)	intron (NM_174849, intron 4 of 10)	2024	NM_001294262	231093	Mm.440364	NM_174849	ENSMUSG00000029165	Agbl5	4930455N08|9430057O19Rik|CCP5	ATP/GTP binding protein-like 5	protein-coding
common_peak1-12119-31-14-1.3183480752046-2.63673708350641	chr17	26614045	26615442	+	0	NA	Intergenic	MTC|LTR|MaLR	30674	NM_013642	19252	Mm.239041	NM_013642	ENSMUSG00000024190	Dusp1	3CH134|MKP1|Ptpn16|U19515|erp|mkp-1	dual specificity phosphatase 1	protein-coding
unique_peak2-36991-5-6--0.511735258063458-0.947717972411649	chr3	121553397	121553751	+	0	NA	Intergenic	Intergenic	-35441	NM_008991	19299	Mm.399042	NM_008991	ENSMUSG00000028127	Abcd3	AI313901|AU018866|AW146054|PMP68|PMP70|Pxmp1	ATP-binding cassette, sub-family D (ALD), member 3	protein-coding
unique_peak2-36299-2-7--1.91745425626332-1.45399745587252	chr2	71805502	71805949	+	0	NA	Intergenic	RLTR11B|LTR|ERVK	-13547	NM_001204167	56508	Mm.196153	NM_019688	ENSMUSG00000049044	Rapgef4	1300003D15Rik|5730402K07Rik|6330581N18Rik|EPAC 2|Epac-2|Epac2|mKIAA4040	Rap guanine nucleotide exchange factor (GEF) 4	protein-coding
common_peak2-31457-11-14--0.398197011356905-0.379391706698377	chr8	105346774	105347321	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-38036	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
unique_peak1-5234-17-6-1.41094141614743-1.84350559086818	chr5	43807760	43808603	+	0	NA	Intergenic	Intergenic	-98627	NM_001135172	109323	Mm.275553	NM_175425	ENSMUSG00000061535	C1qtnf7	5530401N20Rik|8430425G24Rik|Ctrp7	C1q and tumor necrosis factor related protein 7	protein-coding
unique_peak1-3187-7-1-1.79909083029819-1.80617997398389	chr18	48046567	48047020	+	0	NA	Intergenic	Lx4A|LINE|L1	-35702	NR_045404	414127	Mm.450768	NR_045404		G630055G22Rik	-	RIKEN cDNA G630055G22 gene	ncRNA
common_peak1-19455-18-23--0.272043349492805-0.34651636097721	chrX	103623149	103624036	+	0	NA	intron (NM_001007580, intron 22 of 26)	intron (NM_001007580, intron 22 of 26)	56976	NM_001007580	333564	Mm.298000	NM_001007580	ENSMUSG00000033737	Fndc3c1	Fndc3c|Gm784	fibronectin type III domain containing 3C1	protein-coding
unique_peak1-5498-7-0-2.79909083029819-2.40823996531185	chr5	135887800	135888295	+	0	NA	intron (NM_146001, intron 30 of 30)	(TG)n|Simple_repeat|Simple_repeat	-17631	NM_148932	107939	Mm.28399	NM_148932	ENSMUSG00000053293	Pom121	2610027A18Rik|C80273|mKIAA0618	nuclear pore membrane protein 121	protein-coding
unique_peak1-2017-44-8-2.65196783312622-9.33819820130472	chr15	8941132	8942299	+	0	NA	intron (NM_198024, intron 1 of 11)	intron (NM_198024, intron 1 of 11)	23766	NM_198024	223332	Mm.321371	NM_198024		Ranbp3l	C130037N17Rik	RAN binding protein 3-like	protein-coding
unique_peak1-5796-12-0-3.64877598508764-4.21441993929574	chr6	61180185	61180841	+	0	NA	intron (NM_183310, intron 1 of 10)	intron (NM_183310, intron 1 of 10)	-49709	NR_040287	100504262	Mm.438066	NR_040287		A730020E08Rik	-	RIKEN cDNA A730020E08 gene	ncRNA
unique_peak1-4719-16-7-1.11826364226806-1.23399803405144	chr3	104435975	104436802	+	0	NA	Intergenic	Intergenic	-6199	NM_009196	20501	Mm.9086	NM_009196	ENSMUSG00000032902	Slc16a1	AL022710|Mct1	solute carrier family 16 (monocarboxylic acid transporters), member 1	protein-coding
common_peak1-7476-24-29--0.113680692840802-0.304839791830752	chr1	180813570	180814459	+	0	NA	intron (NM_001161665, intron 9 of 14)	intron (NM_001161665, intron 9 of 14)	354758	NM_001161665	269152	Mm.129727	NM_177724	ENSMUSG00000026494	Kif26b	4832420M10|BC056349|D230039L06Rik	kinesin family member 26B	protein-coding
unique_peak1-6659-10-0-3.35641534500877-3.31132995230379	chr8	14994512	14995027	+	0	NA	intron (NM_172751, intron 27 of 28)	intron (NM_172751, intron 27 of 28)	-16256	NM_029116	74901	Mm.46675	NM_029116	ENSMUSG00000055675	Kbtbd11	2900016B01Rik|4930465M17Rik|mKIAA0711	kelch repeat and BTB (POZ) domain containing 11	protein-coding
common_peak1-10854-66-62-0.541203740925924-1.57822318378457	chr14	121182437	121184469	+	0	NA	Intergenic	Lx2B|LINE|L1	-126963	NM_023579	70572	Mm.221452	NM_023579	ENSMUSG00000030662	Ipo5	1110011C18Rik|5730478E03Rik|AA409333|C76941|IMB3|Kpnb3|Ranbp5	importin 5	protein-coding
unique_peak2-38117-4-10--1.48289213249054-1.5150158574804	chr6	72930200	72930747	+	0	NA	Intergenic	B1F|SINE|Alu	-21731	NM_001190327	19240	Mm.3532	NM_025284	ENSMUSG00000079523	Tmsb10	Ptmb10|Tb10	thymosin, beta 10	protein-coding
unique_peak1-3559-9-1-2.18961340640422-2.31132995230379	chr19	26439400	26439932	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-239984	NM_011416	67155	Mm.491146	NM_011416	ENSMUSG00000024921	Smarca2	2610209L14Rik|SNF2alpha|Snf2l2|brahma|brm	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	protein-coding
unique_peak2-35279-3-7--1.41398308995928-1.23214870625617	chr17	5926345	5926712	+	0	NA	intron (NM_025664, intron 15 of 17)	intron (NM_025664, intron 15 of 17)	-14752	NM_001113353	20975	Mm.236068	NM_011523	ENSMUSG00000023805	Synj2	AI481647|SJ2|mKIAA0348	synaptojanin 2	protein-coding
common_peak1-10329-16-19--0.203664452619301-0.325169893479371	chr13	74061655	74062355	+	0	NA	intron (NM_027182, intron 6 of 12)	RLTR25A|LTR|ERVK	13210	NM_027182	69716	Mm.275095	NM_027182	ENSMUSG00000021569	Trip13	2410002G23Rik|D13Ertd328e	thyroid hormone receptor interactor 13	protein-coding
unique_peak2-39158-7-5-0.214128329577033-1.01466476204226	chr8	91313507	91313891	+	0	NA	Intergenic	ORR1A4|LTR|MaLR	92772	NM_001128171	74256	Mm.490395	NM_173369	ENSMUSG00000036712	Cyld	2010013M14Rik|2900009M21Rik|C130039D01Rik|CDMT|CYLD1|EAC|mKIAA0849	cylindromatosis (turban tumor syndrome)	protein-coding
common_peak2-29355-3-5--0.998945590680433-0.96108193396963	chr5	150333084	150333361	+	0	NA	intron (NM_029440, intron 1 of 22)	intron (NM_029440, intron 1 of 22)	1968	NM_029440	381693	Mm.136919	NM_029440	ENSMUSG00000029658	Wdr95	4930434E21Rik	WD40 repeat domain 95	protein-coding
common_peak2-24694-59-208--1.3819951312083-13.0970049038419	chr17	44733414	44737070	+	0	NA	intron (NR_073425, intron 5 of 5)	intron (NR_073425, intron 5 of 5)	137883	NR_073425	12393	Mm.391013	NM_009820	ENSMUSG00000039153	Runx2	AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a	runt related transcription factor 2	protein-coding
common_peak2-31215-32-42--0.147172735482438-0.325162986021101	chr8	68061840	68062814	+	0	NA	Intergenic	RMER6A|LTR|ERVK	-79612	NM_001293784	72925	Mm.380457	NM_175188	ENSMUSG00000036469	March1	2900024D24Rik|BB085186	membrane-associated ring finger (C3HC4) 1	protein-coding
common_peak2-22418-39-37-0.367833733475568-0.665814527695537	chr13	36726578	36727885	+	0	NA	Intergenic	B4A|SINE|B4	99115	NM_153529	68404	Mm.232930	NM_153529	ENSMUSG00000039114	Nrn1	0710008J23Rik|Cpg15|Nrn	neuritin 1	protein-coding
common_peak1-11232-24-21-0.333778284130419-0.518921928796332	chr15	79391106	79392079	+	0	NA	TTS (NM_010059)	TTS (NM_010059)	-14421	NM_199080	67040	Mm.29644	NM_152806	ENSMUSG00000055065	Ddx17	2610007K22Rik|A430025E01Rik|AI047725|C80929|Gm926|p72	DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	protein-coding
common_peak1-15165-15-31--0.987835249444344-1.35897270024963	chr3	148988605	148989413	+	0	NA	Intergenic	Intergenic	51308	NR_040591	381482	Mm.393866	NR_040591		Gm1653	-	predicted gene 1653	ncRNA
common_peak1-11098-12-16--0.4386868561627-0.368541233333383	chr15	60824465	60825069	+	0	NA	Intergenic	MTC-int|LTR|MaLR	-71942	NM_001081067	117586	Mm.291499	NM_001081067	ENSMUSG00000022347	A1bg	C44	alpha-1-B glycoprotein	protein-coding
unique_peak1-1616-22-5-2.06232160436625-3.46164246247458	chr13	41519034	41520022	+	0	NA	intron (NM_001111324, intron 2 of 7)	intron (NM_001111324, intron 2 of 7)	63201	NM_001111324	18003	Mm.288980	NM_017464	ENSMUSG00000021365	Nedd9	Cas-L|CasL|HEF1|MEF1|Nedd-9|p105	neural precursor cell expressed, developmentally down-regulated gene 9	protein-coding
unique_peak2-35510-7-7--0.200909169701811-0.97990265578305	chr17	47508158	47508709	+	0	NA	intron (NM_183086, intron 1 of 6)	intron (NM_183086, intron 1 of 6)	2287	NM_183086	64657	Mm.216250	NM_183086	ENSMUSG00000034729	Mrps10	1110038B19Rik|AW743084|Rpms10	mitochondrial ribosomal protein S10	protein-coding
unique_peak1-3205-9-6-0.382258484346616-1.11707584880836	chr18	56715722	56716331	+	0	NA	intron (NM_138600, intron 3 of 17)	intron (NM_138600, intron 3 of 17)	5926	NM_138600	110695	Mm.30250	NM_138600		Aldh7a1	Atq1|D18Wsu181e	aldehyde dehydrogenase family 7, member A1	protein-coding
unique_peak2-38189-6-23--2.01956439034085-2.6100056615562	chr6	98900615	98901326	+	0	NA	intron (NM_053202, intron 12 of 18)	intron (NM_053202, intron 12 of 18)	77322	NM_001197322	108655	Mm.234965	NM_053202	ENSMUSG00000030067	Foxp1	3110052D19Rik|4932443N09Rik|AI461938|AW494214	forkhead box P1	protein-coding
unique_peak1-704-6-4-0.24347001549294-0.989110657569874	chr10	83353857	83354376	+	0	NA	Intergenic	Intergenic	168506	NM_001145198	69784	Mm.271188	NM_001145198	ENSMUSG00000087651	1500009L16Rik	2700050C19Rik|OCC-1	RIKEN cDNA 1500009L16 gene	protein-coding
unique_peak1-1234-11-1-2.50869358425161-2.83420869758413	chr11	113031874	113032418	+	0	NA	intron (NR_015556, intron 1 of 2)	intron (NR_015556, intron 1 of 2)	31006	NR_015556	72386	Mm.266961	NR_015556	ENSMUSG00000087259	2610035D17Rik	-	RIKEN cDNA 2610035D17 gene	ncRNA
unique_peak1-2145-18-5-1.7279566505072-2.39372960542229	chr15	58565465	58566434	+	0	NA	Intergenic	Intergenic	89033	NM_175212	74868	Mm.293754	NM_175212	ENSMUSG00000062373	Tmem65	2610029O13Rik|4930438D12Rik	transmembrane protein 65	protein-coding
common_peak1-11792-13-6-0.971117108580164-1.01572999746118	chr16	52443731	52444367	+	0	NA	intron (NM_009655, intron 1 of 15)	intron (NM_009655, intron 1 of 15)	9061	NM_009655	11658	Mm.288282	NM_009655	ENSMUSG00000022636	Alcam	AI853494|BEN|CD166|DM-GRASP|MuSC|SC1	activated leukocyte cell adhesion molecule	protein-coding
common_peak1-19101-15-14-0.105274154947137-0.330004445983672	chr9	72639032	72639791	+	0	NA	Intergenic	Intergenic	-15670	NM_175485	235472	Mm.31696	NM_175485	ENSMUSG00000036030	Prtg	A230098A12Rik|Igdcc5	protogenin homolog (Gallus gallus)	protein-coding
common_peak2-28108-9-15--0.81038659359578-0.630231561310125	chr4	88950097	88950663	+	0	NA	Intergenic	L1MA7|LINE|L1	6561	NM_007670	12579	Mm.423094	NM_007670	ENSMUSG00000073802	Cdkn2b	AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b	cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)	protein-coding
unique_peak2-34822-6-11--1.01956439034085-1.32595962126035	chr15	74960450	74961048	+	0	NA	Intergenic	RLTR18B|LTR|ERVK	-18370	NM_001099217	100041546	Mm.482110	NM_001099217	ENSMUSG00000022584	Ly6c2	Ly-6C.2|Ly-6C2	lymphocyte antigen 6 complex, locus C2	protein-coding
common_peak2-22442-20-17-0.318149783148881-0.440610794044987	chr13	40913909	40914413	+	0	NA	Intergenic	RLTR19-int|LTR|ERVK	-40976	NM_023887	14538	Mm.314757	NM_008105	ENSMUSG00000021360	Gcnt2	5330430K10Rik|IGnT|IGnTA|IGnTB|IGnTC	glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	protein-coding
unique_peak1-2523-10-5-0.771452844287613-1.33892459842472	chr16	20611655	20612089	+	0	NA	exon (NM_025462, exon 1 of 3)	exon (NM_025462, exon 1 of 3)	198	NM_025462	107522	Mm.263319	NM_025462	ENSMUSG00000022842	Ece2	1810009K13Rik|6330509A19Rik|9630025D12Rik|BB127715	endothelin converting enzyme 2	protein-coding
unique_peak1-7396-8-0-3.00522241794757-2.70926996097583	chrX	103987072	103987581	+	0	NA	Intergenic	L1Md_F|LINE|L1	48656	NM_199468	213436	Mm.85581	NM_199468	ENSMUSG00000047686	Zcchc5	D430021I08Rik|Gm375|Mar3|Mart3|ZHC5	zinc finger, CCHC domain containing 5	protein-coding
unique_peak2-33809-1-4--1.94898510510411-1.10720996964787	chr11	120983803	120984217	+	0	NA	Intergenic	Intergenic	-4019	NM_027622	70956	Mm.158506	NM_027622	ENSMUSG00000039337	Tex19.2	4921530G04Rik|Tex19b	testis expressed gene 19.2	protein-coding
common_peak1-15056-22-28--0.210696890040167-0.337923771396236	chr3	122984684	122985382	+	0	NA	intron (NM_027135, intron 3 of 22)	intron (NM_027135, intron 3 of 22)	14619	NM_027135	69608	Mm.29293	NM_027135	ENSMUSG00000039234	Sec24d	2310020L09Rik|Gm1349	Sec24 related gene family, member D (S. cerevisiae)	protein-coding
common_peak1-15417-8-20--1.38709500483119-1.45476480588849	chr4	88785074	88785481	+	0	NA	intron (NM_024433, intron 1 of 7)	intron (NM_024433, intron 1 of 7)	2003	NM_024433	66902	Mm.28500	NM_024433	ENSMUSG00000062937	Mtap	1300019I21Rik|MSAP	methylthioadenosine phosphorylase	protein-coding
common_peak1-17149-78-81-0.449269089542451-1.38696358854294	chr6	117906463	117907887	+	0	NA	Intergenic	Intergenic	-19822	NM_001173372	108017	Mm.250392	NM_033648		Fxyd4	0610008I02Rik|AI267073|Chif	FXYD domain-containing ion transport regulator 4	protein-coding
common_peak1-7714-26-24-0.284042902383738-0.446094173747083	chr1	87574473	87575542	+	0	NA	intron (NM_013673, intron 9 of 19)	B3|SINE|B2	28382	NM_013673	20684	Mm.290906	NM_013673	ENSMUSG00000026222	Sp100	A430075G10Rik	nuclear antigen Sp100	protein-coding
unique_peak1-1018-8-4-0.683294323060208-1.21878474469819	chr11	74898077	74898594	+	0	NA	intron (NM_001002764, intron 13 of 18)	B1_Mus1|SINE|Alu	-18842	NR_030454	735274		NR_030454		Mir684-1	Mirn684-1	microRNA 684-1	ncRNA
unique_peak2-37771-4-9--1.34538860874061-1.36011389749466	chr5	115503275	115503845	+	0	NA	intron (NM_029012, intron 1 of 10)	intron (NM_029012, intron 1 of 10)	42027	NM_029012	74585	Mm.355894	NM_029012	ENSMUSG00000029550	Sppl3	4833416I09Rik|Psl4|Usmg3	signal peptide peptidase 3	protein-coding
unique_peak2-36834-11-16--0.578769256998726-0.503257505534083	chr3	88621961	88622653	+	0	NA	intron (NR_028359, intron 13 of 17)	intron (NR_028359, intron 13 of 17)	14102	NR_015498	319830	Mm.400394	NR_015498		1500004A13Rik	5430404N14Rik|BB132176	RIKEN cDNA 1500004A13 gene	ncRNA
unique_peak2-37638-9-15--0.81038659359578-0.630231561310125	chr5	73566648	73567493	+	0	NA	intron (NM_028194, intron 3 of 62)	MER44D|DNA|MER2_type	80787	NM_028194	72313	Mm.260594	NM_028194	ENSMUSG00000070733	Fryl	2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|mKIAA0826	furry homolog-like (Drosophila)	protein-coding
common_peak2-27705-35-87--1.02806136017479-3.59961219983479	chr3	122245494	122246418	+	0	NA	intron (NM_001114665, intron 15 of 15)	RSINE1|SINE|B4	-1357	NR_106117	102465764		NR_106117		Mir7657	mmu-mir-7657	microRNA mir-7657	ncRNA
unique_peak2-36169-5-7--0.704380336005853-1.01466476204226	chr2	28538199	28538604	+	0	NA	intron (NM_001289575, intron 20 of 22)	intron (NM_001289575, intron 20 of 22)	16770	NM_027283	69987	Mm.239376	NM_027283	ENSMUSG00000026809	1700026L06Rik	MAST	RIKEN cDNA 1700026L06 gene	protein-coding
common_peak2-25791-8-6-0.197867495889966-1.03789460276074	chr19	36409130	36409530	+	0	NA	Intergenic	MTA_Mm-int|LTR|MaLR	-44227	NM_029508	76073	Mm.259180	NM_029508	ENSMUSG00000024805	Pcgf5	0610009F02Rik|1110054A01Rik|5830406C17Rik|5830443C21Rik|9530023M17Rik|AI324127	polycomb group ring finger 5	protein-coding
common_peak1-12030-10-1-2.35641534500877-2.57096726280955	chr17	17235555	17235955	+	0	NA	Intergenic	Lx3_Mus|LINE|L1	-22592	NM_011765	22759	Mm.436633	NM_011765	ENSMUSG00000095990	Zfp97	NGD16-4	zinc finger protein 97	protein-coding
common_peak2-28547-34-85--1.04419622770083-3.52584576600981	chr5	3802129	3803940	+	0	NA	promoter-TSS (NM_030675)	promoter-TSS (NM_030675)	90	NM_001289528	70797	Mm.130148	NM_001003909	ENSMUSG00000040351	Ankib1	2310061P20Rik|4631416I11Rik|AW494740|C80642|mKIAA1386	ankyrin repeat and IBR domain containing 1	protein-coding
common_peak1-9573-13-20--0.613845392140992-0.532159081577619	chr11	118145869	118146611	+	0	NA	exon (NM_001033528, exon 4 of 21)	exon (NM_001033528, exon 4 of 21)	5318	NM_001033528	72344	Mm.232293	NM_001033528	ENSMUSG00000033909	Usp36	2700002L06Rik|mKIAA1453	ubiquitin specific peptidase 36	protein-coding
common_peak1-7444-30-25-0.469235691350781-0.734130039933318	chr1	53312997	53314258	+	0	NA	exon (NM_153556, exon 5 of 13)	exon (NM_153556, exon 5 of 13)	40213	NM_153556	227099	Mm.60499	NM_153556	ENSMUSG00000026098	Pms1	-	postmeiotic segregation increased 1 (S. cerevisiae)	protein-coding
unique_peak1-4663-18-4-1.99099105634099-2.82951996911245	chr3	90706008	90706538	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-169311	NR_033593	619677	Mm.396622	NR_033593	ENSMUSG00000086377	4930529C04Rik	-	zinc finger, BED domain containing 4 pseudogene	pseudo
common_peak2-31164-15-19--0.309763344331706-0.356936432242222	chr8	45627389	45628338	+	0	NA	Intergenic	Intergenic	-407699	NM_001081286	14107	Mm.27365	NM_001081286	ENSMUSG00000070047	Fat1	2310038E12Rik|AU023433|Fath|mFat1	FAT tumor suppressor homolog 1 (Drosophila)	protein-coding
common_peak1-11976-16-23--0.466698858453094-0.497202060940027	chr17	7945444	7946229	+	0	NA	intron (NM_001081416, intron 14 of 19)	intron (NM_001081416, intron 14 of 19)	52003	NM_001081416	68655	Mm.379161	NM_001081416	ENSMUSG00000071984	Fndc1	1110027O12Rik|1110051A18Rik|mKIAA1866	fibronectin type III domain containing 1	protein-coding
common_peak1-9912-16-12-0.417823924126969-0.489164546851866	chr12	87443440	87444176	+	0	NA	intron (NM_029601, intron 2 of 7)	intron (NM_029601, intron 2 of 7)	20297	NM_001199843	76411	Mm.292345	NM_029601	ENSMUSG00000007867	Ift43	1700019E19Rik|R75064	intraflagellar transport 43	protein-coding
unique_peak1-2905-7-2-1.21412832957703-1.45399745587252	chr17	46004370	46004712	+	0	NA	Intergenic	Intergenic	-133748	NM_028164	72240	Mm.482897	NM_028164	ENSMUSG00000094690	1600014C23Rik	-	RIKEN cDNA 1600014C23 gene	protein-coding
common_peak2-26146-5-11--1.28934283672701-1.477227296591	chr2	13977116	13977539	+	0	NA	intron (NM_001012396, intron 1 of 5)	CpG	335	NM_001012396	30963	Mm.241205	NM_013935	ENSMUSG00000063275	Ptpla	HACD1	protein tyrosine phosphatase-like (proline instead of catalytic arginine), member a	protein-coding
unique_peak1-2537-8-1-2.00522241794757-2.05605744720049	chr16	21644335	21644855	+	0	NA	3' UTR (NM_001285894, exon 46 of 46)	3' UTR (NM_001285894, exon 46 of 46)	50143	NM_001001881	72190	Mm.131606	NM_001001881	ENSMUSG00000043391	2510009E07Rik	AI194952	RIKEN cDNA 2510009E07 gene	protein-coding
common_peak1-18367-8-38--2.28017980091468-4.91804610622903	chr8	70506205	70506769	+	0	NA	Intergenic	Lx8|LINE|L1	-8014	NM_177698	234353	Mm.32525	NM_027626	ENSMUSG00000030465	Psd3	4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D	pleckstrin and Sec7 domain containing 3	protein-coding
unique_peak1-5309-13-0-3.77847203063777-4.51544993495972	chr5	75921799	75922426	+	0	NA	Intergenic	MTB|LTR|MaLR	-48900	NM_001122733	16590	Mm.247073	NM_021099	ENSMUSG00000005672	Kit	Bs|CD117|Fdc|Gsfsco1|Gsfsco5|Gsfsow3|SCO1|SCO5|SOW3|Ssm|Tr-kit|W|c-KIT	kit oncogene	protein-coding
unique_peak2-33602-4-6--0.830815435910851-0.989110657569874	chr11	94133628	94134106	+	0	NA	Intergenic	Intergenic	-29974	NM_181819	278507	Mm.342216	NM_181819	ENSMUSG00000044177	Wfikkn2	2610304F08Rik|AY100450|Gasp1|WFIKKNRP	WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2	protein-coding
common_peak2-32096-7-13--1.00826409175941-0.697979855752659	chr9	99132387	99132883	+	0	NA	intron (NM_001244762, intron 4 of 4)	intron (NM_001244762, intron 4 of 4)	5023	NM_001244762	623459	Mm.260891	NM_001244762	ENSMUSG00000096316	Gm6432	EG623459	predicted gene 6432	protein-coding
common_peak1-15885-17-32--0.826097781153416-1.02859851787301	chr5	8996855	8997710	+	0	NA	promoter-TSS (NM_023733)	promoter-TSS (NM_023733)	-136	NM_023733	74114	Mm.28197	NM_023733	ENSMUSG00000003623	Crot	1200003H03Rik	carnitine O-octanoyltransferase	protein-coding
common_peak2-31714-21-21-0.110057646628938-0.344491671143527	chr9	99139440	99140182	+	0	NA	Intergenic	RMER6A|LTR|ERVK	-2153	NM_001244762	623459	Mm.260891	NM_001244762	ENSMUSG00000096316	Gm6432	EG623459	predicted gene 6432	protein-coding
common_peak2-28582-12-11-0.0638134843664826-0.337263207250336	chr5	13959788	13960404	+	0	NA	Intergenic	Intergenic	-65180	NM_011348	20349	Mm.134093	NM_011348	ENSMUSG00000063531	Sema3e	6430702L12|AA408817|Semah|mKIAA0331	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E	protein-coding
unique_peak2-39469-5-5--0.289342836727009-0.909929411522249	chr9	56109759	56110165	+	0	NA	intron (NM_172924, intron 3 of 6)	B4A|SINE|B4	-101085	NM_019793	56434	Mm.28484	NM_019793	ENSMUSG00000032324	Tspan3	1700055K04Rik|TM4-A|Tm4sf8	tetraspanin 3	protein-coding
common_peak1-10403-9-8-0.0196884049619079-1.03275496310833	chr13	98002143	98002767	+	0	NA	Intergenic	Intergenic	-8605	NM_007930	13803	Mm.241073	NM_007930	ENSMUSG00000041773	Enc1	Nrpb|PIG10	ectodermal-neural cortex 1	protein-coding
common_peak2-25584-13-9-0.456543935750406-0.53895475198017	chr19	7303232	7303801	+	0	NA	intron (NM_027643, intron 6 of 7)	B2_Mm2|SINE|B2	-11410	NM_007750	12868	Mm.14022	NM_007750	ENSMUSG00000035885	Cox8a	COX8L	cytochrome c oxidase subunit VIIIa	protein-coding
common_peak2-29940-15-23--0.5727977501655-0.575340103425218	chr6	116192935	116193516	+	0	NA	intron (NM_026585, intron 20 of 30)	B2_Mm1t|SINE|B2	-21012	NM_001290338	67492	Mm.272772	NM_001081317	ENSMUSG00000042213	Zfand4	Anubl1	zinc finger, AN1-type domain 4	protein-coding
unique_peak2-36204-3-8--1.58390809140159-1.39487600375387	chr2	32876176	32876602	+	0	NA	intron (NM_178888, intron 14 of 28)	intron (NM_178888, intron 14 of 28)	-38813	NM_019488	56017	Mm.305754	NM_019488	ENSMUSG00000026791	Slc2a8	D2Ertd44e|GLUT8|GlutX1	solute carrier family 2, (facilitated glucose transporter), member 8	protein-coding
unique_peak2-39613-1-10--3.08648862885404-2.57096726280955	chr9	87464738	87465168	+	0	NA	Intergenic	Intergenic	161142	NM_023814	76365	Mm.158789	NM_023814	ENSMUSG00000032419	Tbx18	2810012F10Rik|2810404D13Rik	T-box18	protein-coding
common_peak2-27638-42-71--0.427595673575128-0.804633617149182	chr3	107333269	107334549	+	0	NA	Intergenic	Intergenic	-12973	NM_172271	229706	Mm.212867	NM_172271	ENSMUSG00000027894	Slc6a17	D130012J15Rik|Ntt4	solute carrier family 6 (neurotransmitter transporter), member 17	protein-coding
common_peak2-25126-35-19-1.10944216357514-2.37206698596504	chr18	38928676	38929677	+	0	NA	Intergenic	AT_rich|Low_complexity|Low_complexity	-122934	NM_001033789	545253	Mm.244585	NM_001033789		Gm5820	EG545253	predicted gene 5820	protein-coding
unique_peak2-33238-3-7--1.41398308995928-1.23214870625617	chr10	121464648	121465142	+	0	NA	intron (NM_001242411, intron 1 of 21)	intron (NM_001242411, intron 1 of 21)	19476	NM_001242411	117600	Mm.288698	NM_001081037	ENSMUSG00000020121	Srgap1	4930572H05Rik|Arhgap13	SLIT-ROBO Rho GTPase activating protein 1	protein-coding
unique_peak1-1059-24-10-1.33377828413042-2.22881803703862	chr11	80802483	80803495	+	0	NA	intron (NM_001034013, intron 1 of 9)	intron (NM_001034013, intron 1 of 9)	131098	NM_029367	75622	Mm.26988	NM_029367	ENSMUSG00000053184	Spaca3	1700025M08Rik|ALLP17|Lyc3|SLLP1|mSLLP1	sperm acrosome associated 3	protein-coding
unique_peak1-2945-7-4-0.477162735410827-1.09384600808989	chr17	66358741	66359179	+	0	NA	intron (NM_001025572, intron 8 of 12)	intron (NM_001025572, intron 8 of 12)	-58433	NM_023053	65960	Mm.10153	NM_023053	ENSMUSG00000024098	Twsg1	1810013J15Rik|9030422N06Rik|AW552143|D17Ertd403e|Tsg|Twg	twisted gastrulation homolog 1 (Drosophila)	protein-coding
common_peak1-15875-39-167--1.77655617585961-15.0947574135264	chr5	5693403	5694478	+	0	NA	5' UTR (NM_001103157, exon 1 of 6)	5' UTR (NM_001103157, exon 1 of 6)	149	NM_001285471	74051	Mm.274956	NM_028734	ENSMUSG00000015653	Steap2	4921538B17Rik|AI930049|AW045895|IPCA-1|IPCA1|PCANAP1|STAMP1|STMP	six transmembrane epithelial antigen of prostate 2	protein-coding
common_peak2-25960-20-26--0.266812717572275-0.373496418836697	chr19	47902346	47903429	+	0	NA	intron (NM_027559, intron 3 of 37)	intron (NM_027559, intron 3 of 37)	8964	NM_027559	100048534	Mm.29457	NM_027559	ENSMUSG00000044948	Cfap43	4632415N18Rik|4930428C11Rik|4930463G05Rik|AI429486|D19Ertd652e|Wdr96	cilia and flagella associated protein 43	protein-coding
unique_peak1-7074-12-0-3.64877598508764-4.21441993929574	chr9	17733765	17734375	+	0	NA	Intergenic	Intergenic	-362641	NM_025844	66917	Mm.103534	NM_025844	ENSMUSG00000001774	Chordc1	1110001O09Rik|AA409036|Chp-1|morgana	cysteine and histidine-rich domain (CHORD)-containing, zinc-binding protein 1	protein-coding
unique_peak2-32449-7-13--1.00826409175941-0.697979855752659	chr1	7398106	7398700	+	0	NA	Intergenic	Intergenic	319402	NM_183028	319263	Mm.21539	NM_183028	ENSMUSG00000051285	Pcmtd1	8430411F12Rik|A030012M09Rik	protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	protein-coding
unique_peak1-2141-11-3-1.50869358425161-1.95434855131066	chr15	58256129	58256685	+	0	NA	exon (NM_145959, exon 6 of 24)	exon (NM_145959, exon 6 of 24)	9384	NM_145959	210998	Mm.3224	NM_145959	ENSMUSG00000037119	D15Ertd621e	AV220772|BC033609|Fam91a1|SKIN|mKIAA0493	DNA segment, Chr 15, ERATO Doi 621, expressed	protein-coding
common_peak1-17244-73-76-0.425608465730321-1.18877383208862	chr6	128759938	128761320	+	0	NA	Intergenic	Intergenic	15704	NM_030599	80782	Mm.6180	NM_030599	ENSMUSG00000079298	Klrb1b	Klrb1d|Ly55b|Ly55d|NKR-P1B|NKR-P1D|Nkrp1-b|Nkrp1d	killer cell lectin-like receptor subfamily B member 1B	protein-coding
common_peak2-27516-44-69--0.307390182376431-0.549574798715332	chr3	95650224	95651475	+	0	NA	intron (NM_027541, intron 6 of 15)	B1_Mus1|SINE|Alu	8827	NM_027541	70767	Mm.279872	NM_027541	ENSMUSG00000015748	Prpf3	3632413F13Rik	PRP3 pre-mRNA processing factor 3 homolog (yeast)	protein-coding
unique_peak2-35761-2-7--1.91745425626332-1.45399745587252	chr18	39738103	39738373	+	0	NA	Intergenic	(TCTA)n|Simple_repeat|Simple_repeat	-91339	NM_008173	14815	Mm.129481	NM_008173	ENSMUSG00000024431	Nr3c1	GR|Grl-1|Grl1	nuclear receptor subfamily 3, group C, member 1	protein-coding
common_peak1-17909-16-18--0.129663871175524-0.307235046933848	chr7	124458724	124459447	+	0	NA	Intergenic	Intergenic	-65408	NM_175645	233781	Mm.461427	NM_175645	ENSMUSG00000030657	Xylt1	8030490L12	xylosyltransferase 1	protein-coding
unique_peak2-39345-5-14--1.61127093161437-1.95509489018123	chr9	57130666	57131272	+	0	NA	Intergenic	Intergenic	-20563	NM_028820	74211	Mm.428905	NM_028820	ENSMUSG00000032300	1700017B05Rik	AA682102|D9Ertd278e	RIKEN cDNA 1700017B05 gene	protein-coding
common_peak2-31532-18-22--0.210642804828661-0.321718508207525	chr8	110919821	110920518	+	0	NA	Intergenic	MER20|DNA|MER1_type	188408	NR_077224	109215	Mm.65282	NR_077224		3010033K07Rik	-	RIKEN cDNA 3010033K07 gene	ncRNA
common_peak1-11821-74-31-1.71588657697861-9.53690677882179	chr16	77328730	77331765	+	0	NA	intron (NR_015543, intron 1 of 4)	intron (NR_015543, intron 1 of 4)	674	NR_015543	77994	Mm.394688	NR_015543	ENSMUSG00000090386	2810055G20Rik	D730043B02Rik	RIKEN cDNA 2810055G20 gene	ncRNA
common_peak2-23067-18-23--0.272043349492805-0.34651636097721	chr14	73238009	73238627	+	0	NA	Intergenic	Intergenic	-128508	NM_207636	319448	Mm.205421	NM_207636	ENSMUSG00000033487	Fndc3a	1700094E19Rik|D14Ertd453e|F730017H24Rik|Fndc3|sys	fibronectin type III domain containing 3A	protein-coding
common_peak2-19727-26-20-0.535581669379702-0.738267116931592	chr1	72254651	72255208	+	0	NA	intron (NM_001005423, intron 1 of 4)	L1MB7|LINE|L1	3952	NM_001005423	381269	Mm.422636	NM_001005423	ENSMUSG00000039395	Mreg	Gm974|Wdt2|dsu	melanoregulin	protein-coding
common_peak2-25876-33-45--0.192224393531484-0.36493371439645	chr19	43939196	43940540	+	0	NA	intron (NM_028029, intron 10 of 15)	Lx7|LINE|L1	26575	NR_033472	100038628	Mm.212585	NR_033472	ENSMUSG00000074828	Gm10768	ENSMUSG00000074828	predicted gene 10768	ncRNA
common_peak1-17615-16-22--0.405298313788951-0.440610794044987	chr7	45525240	45526055	+	0	NA	Intergenic	Intergenic	994257	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak1-691-22-11-1.06232160436625-1.51503956548638	chr10	80017154	80018295	+	0	NA	intron (NM_025852, intron 1 of 14)	intron (NM_025852, intron 1 of 14)	6581	NM_025852	66932	Mm.1116	NM_025852	ENSMUSG00000047417	Rexo1	1700021P10Rik|2610511M11Rik|AW050347|EloA-BP1|Tceb3bp1	REX1, RNA exonuclease 1 homolog (S. cerevisiae)	protein-coding
common_peak1-18914-16-17--0.0516613591742505-0.301029995663984	chr9	44112901	44113541	+	0	NA	intron (NM_172162, intron 1 of 9)	intron (NM_172162, intron 1 of 9)	533	NM_172162	102423	Mm.24570	NM_172162	ENSMUSG00000032119	Hinfp	AA589481|HiNF-P|Mizf	histone H4 transcription factor	protein-coding
common_peak2-28780-11-13--0.298661337805991-0.337263207250336	chr5	53947603	53948225	+	0	NA	intron (NM_001080928, intron 1 of 10)	intron (NM_001080928, intron 1 of 10)	896	NM_001080928	19664	Mm.209292	NM_009035	ENSMUSG00000039191	Rbpj	AI843960|CBF1|Igkjrb|Igkrsbp|RBP-J|RBP-J kappa|RBPjk|Rbpsuh	recombination signal binding protein for immunoglobulin kappa J region	protein-coding
common_peak1-18962-56-96--0.364317016747885-0.862457503322505	chr9	53666421	53667698	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-30999	NM_025540	66402	Mm.29132	NM_025540	ENSMUSG00000042045	Sln	2310045A07Rik	sarcolipin	protein-coding
common_peak2-32048-62-95--0.174211041919071-0.421729484740878	chr9	82974519	82976144	+	0	NA	Intergenic	MLT1D|LTR|MaLR	64883	NM_175074	94353	Mm.244426	NM_026122	ENSMUSG00000066456	Hmgn3	1110002A15Rik|6330514M13Rik|BB071015|TRIP7	high mobility group nucleosomal binding domain 3	protein-coding
common_peak1-18550-16-25--0.58217607587303-0.633951497070961	chr8	104248078	104248679	+	0	NA	Intergenic	Intergenic	1060633	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
unique_peak2-39995-11-15--0.491306415748387-0.435191258261915	chrX	162991204	162992110	+	0	NA	intron (NM_019397, intron 4 of 11)	intron (NM_019397, intron 4 of 11)	31991	NM_019397	54156	Mm.37707	NM_019397	ENSMUSG00000000402	Egfl6	Maeg	EGF-like-domain, multiple 6	protein-coding
common_peak2-24821-36-59--0.427569509440764-0.711514064421841	chr17	70990175	70991578	+	0	NA	intron (NM_001128180, intron 2 of 9)	intron (NM_001128180, intron 2 of 9)	79789	NM_001128181	224997	Mm.311840	NM_027712	ENSMUSG00000003279	Dlgap1	4933422O14Rik|9630002F18|AI845682|AI848168|BB075781|D17Bwg0511e|GKAP/SAPAP|GKPA/SAPAP|Gkap|Sapap1|mKIAA4162	discs, large (Drosophila) homolog-associated protein 1	protein-coding
common_peak2-27232-12-19--0.673152109799724-0.546772548767014	chr3	51788880	51789789	+	0	NA	intron (NM_001004176, intron 1 of 4)	intron (NM_001004176, intron 1 of 4)	119594	NM_001004176	433586	Mm.234972	NM_001004176	ENSMUSG00000061143	Maml3	AV234550|BC049812|Mam-2|mKIAA1816	mastermind like 3 (Drosophila)	protein-coding
common_peak1-9918-7-6--0.00826409175941478-0.97990265578305	chr12	98283044	98283505	+	0	NA	Intergenic	(TA)n|Simple_repeat|Simple_repeat	-997842	NR_103800	69423	Mm.46121	NM_027076	ENSMUSG00000059695	1700019M22Rik	-	NFX-like protein	pseudo
common_peak1-18460-98-107-0.446881191267082-1.6745972931502	chr8	84191319	84193429	+	0	NA	intron (NM_001297596, intron 2 of 24)	Lx4B|LINE|L1	325913	NM_001297593	234515	Mm.324468	NM_001024617	ENSMUSG00000037940	Inpp4b	E130107I17Rik	inositol polyphosphate-4-phosphatase, type II	protein-coding
unique_peak2-39887-4-6--0.830815435910851-0.989110657569874	chrX	75376489	75376754	+	0	NA	TTS (NM_001085534)	TTS (NM_001085534)	5815	NM_001085534	546335	Mm.476683	NM_001085534	ENSMUSG00000079521	Gm5938	EG546335	predicted gene 5938	protein-coding
common_peak2-31129-16-15-0.118263642268062-0.328191099940264	chr8	34622159	34622822	+	0	NA	Intergenic	BGLII_B|LTR|ERVK	27707	NR_033589	628431	Mm.376526	NR_033589		Hmgb1-rs17	Hmg1-rs17	high mobility group box 1, related sequence 17	pseudo
unique_peak2-37302-5-7--0.704380336005853-1.01466476204226	chr4	123016688	123016988	+	0	NA	intron (NM_007558, intron 1 of 6)	B1F|SINE|Alu	3657	NM_001256019	12163	Mm.439749	NM_007558	ENSMUSG00000032726	Bmp8a	Bmp7r1|OP-2|OP2	bone morphogenetic protein 8a	protein-coding
common_peak1-16039-14-11-0.314253659636488-0.435191258261915	chr5	36721856	36722385	+	0	NA	intron (NM_030889, intron 1 of 26)	HAL1-3A_ME|LINE|L1	18668	NM_030889	81840	Mm.34113	NM_030889	ENSMUSG00000029093	Sorcs2	N28137|mKIAA1329	sortilin-related VPS10 domain containing receptor 2	protein-coding
unique_peak1-6203-19-5-1.81772482594053-2.59995804677862	chr6	149407409	149408237	+	0	NA	intron (NM_001112796, intron 1 of 7)	intron (NM_001112796, intron 1 of 7)	50317	NM_009753	12121	Mm.177181	NM_009753	ENSMUSG00000003452	Bicd1	B830009D06Rik	bicaudal D homolog 1 (Drosophila)	protein-coding
common_peak2-31431-10-11--0.228547155712387-0.31137425193576	chr8	94954686	94955153	+	0	NA	Intergenic	Intergenic	73224	NM_018826	54352	Mm.101153	NM_018826	ENSMUSG00000031737	Irx5	-	Iroquois related homeobox 5 (Drosophila)	protein-coding
common_peak2-26648-55-64-0.182252058124248-0.458521068983781	chr2	120127973	120129535	+	0	NA	intron (NM_001024145, intron 16 of 19)	intron (NM_001024145, intron 16 of 19)	11147	NM_001024145	271844	Mm.24880	NM_001024145	ENSMUSG00000046971	Pla2g4f	4732472I07Rik|Gm647|Pla2zeta	phospholipase A2, group IVF	protein-coding
unique_peak2-38523-0-5--3.42509343119537-1.32905871926422	chr7	45666676	45667037	+	0	NA	Intergenic	Intergenic	853048	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak1-7766-34-39-0.0601404321139034-0.325162986021101	chr1	92473017	92474563	+	0	NA	Intergenic	MTEa|LTR|MaLR	-26210	NM_133805	108679	Mm.119177	NM_133805	ENSMUSG00000034432	Cops8	9430009J09Rik|AA408242|Csn8|Sgn8	COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)	protein-coding
common_peak1-12607-48-14-2.0640365556263-7.62480093858041	chr18	25710397	25711993	+	0	NA	intron (NM_001146294, intron 2 of 12)	intron (NM_001146294, intron 2 of 12)	201289	NM_133195	108013	Mm.266435	NM_133195	ENSMUSG00000024268	Celf4	A230070D14Rik|BRUNOL-4|Brul4|Brunol4|C130060B05Rik	CUGBP, Elav-like family member 4	protein-coding
unique_peak1-7283-8-1-2.00522241794757-2.05605744720049	chr9	104088512	104089034	+	0	NA	intron (NM_001163026, intron 35 of 55)	intron (NM_001163026, intron 35 of 55)	-59800	NM_145700	252837	Mm.269254	NM_145700	ENSMUSG00000079355	Ackr4	A630091E18Rik|CCBP2|CCR11|CCX-CKR|CCX-CKR1|Ccrl1|Cmkbrl1|PPR1|VSHK1	atypical chemokine receptor 4	protein-coding
unique_peak2-36357-10-29--1.55047525059975-2.39922209159552	chr2	102185607	102186414	+	0	NA	intron (NM_020267, intron 4 of 4)	MTE2a|LTR|MaLR	55047	NM_020267	80985	Mm.315002	NM_020267	ENSMUSG00000027189	Trim44	Dipb|Mc7	tripartite motif-containing 44	protein-coding
common_peak2-21815-14-15--0.100783839642355-0.301029995663982	chr11	119127018	119127725	+	0	NA	TTS (NM_175430)	TTS (NM_175430)	-1910	NM_001159324	14387	Mm.4793	NM_008064	ENSMUSG00000025579	Gaa	E430018M07Rik	glucosidase, alpha, acid	protein-coding
unique_peak1-544-9-0-3.18961340640422-3.01029995663981	chr1	191445379	191445914	+	0	NA	Intergenic	Intergenic	66319	NM_001081363	108000	Mm.129746	NM_001081363	ENSMUSG00000026605	Cenpf	6530404A22Rik|AI325968|CENF|Lek1|PRO1779|mitosin	centromere protein F	protein-coding
common_peak1-17673-34-27-0.574713604943662-1.01480426461253	chr7	65789779	65790738	+	0	NA	Intergenic	Intergenic	-123314	NM_009728	11982	Mm.135129	NM_009728	ENSMUSG00000025324	Atp10a	Atp10c|pfatp	ATPase, class V, type 10A	protein-coding
unique_peak1-6733-19-4-2.08075923177432-3.05312482518673	chr8	45602020	45602757	+	0	NA	Intergenic	ORR1A2|LTR|MaLR	-433174	NM_001081286	14107	Mm.27365	NM_001081286	ENSMUSG00000070047	Fat1	2310038E12Rik|AU023433|Fath|mFat1	FAT tumor suppressor homolog 1 (Drosophila)	protein-coding
common_peak1-18377-12-28--1.20920501003993-1.52081014994907	chr8	70673068	70673688	+	0	NA	Intergenic	Intergenic	-127049	NM_028182	72281	Mm.40974	NM_028182	ENSMUSG00000053886	Sh2d4a	2210402M20Rik|SH2A	SH2 domain containing 4A	protein-coding
common_peak1-9767-43-65--0.261830933834751-0.482196053595805	chr12	55154633	55156014	+	0	NA	intron (NM_013780, intron 9 of 11)	intron (NM_013780, intron 9 of 11)	149538	NM_028133	112407	Mm.133037	NM_028133	ENSMUSG00000035105	Egln3	2610021G09Rik|AI505553|AI648162|Hif-p4h-3|Phd3|SM-20	egl-9 family hypoxia-inducible factor 3	protein-coding
common_peak1-10496-26-8-1.75797409071615-3.2467506969819	chr14	21822523	21823592	+	0	NA	intron (NM_009502, intron 10 of 20)	intron (NM_009502, intron 10 of 20)	48607	NM_018829	55946	Mm.376269	NM_018829		Ap3m1	1200013D09Rik|C78982|R75378	adaptor-related protein complex 3, mu 1 subunit	protein-coding
common_peak1-15222-20-26--0.266812717572275-0.373496418836697	chr4	141344763	141345540	+	0	NA	intron (NM_172338, intron 1 of 14)	intron (NM_172338, intron 1 of 14)	1408	NM_172338	214063	Mm.39102	NM_172338		Dnajc16	2900037O03Rik|4732437J24Rik|D030060M24|mKIAA0962	DnaJ (Hsp40) homolog, subfamily C, member 16	protein-coding
unique_peak1-15-14-1-2.89921616035764-3.91338994363176	chr1	163512268	163513053	+	0	NA	Intergenic	Lx6|LINE|L1	87872	NM_183391	240873	Mm.276823	NM_183391	ENSMUSG00000066755	Tnfsf18	Gitrl	tumor necrosis factor (ligand) superfamily, member 18	protein-coding
unique_peak1-3030-18-5-1.7279566505072-2.39372960542229	chr18	57785903	57786781	+	0	NA	intron (NM_029290, intron 5 of 6)	GA-rich|Low_complexity|Low_complexity	11897	NR_045360	70157	Mm.490532	NR_045360		2210409D07Rik	-	RIKEN cDNA 2210409D07 gene	ncRNA
common_peak1-17475-10-7-0.356415345008769-1.12966497611638	chr7	19953069	19953544	+	0	NA	intron (NM_001010836, intron 1 of 12)	B1F|SINE|Alu	6741	NM_001010836	333654	Mm.333640	NM_001010836	ENSMUSG00000040734	Ppp1r13l	AV260376|IASPP|Nkip1|wa3	protein phosphatase 1, regulatory (inhibitor) subunit 13 like	protein-coding
unique_peak1-1786-9-3-1.18961340640422-1.57096726280955	chr14	16484249	16484730	+	0	NA	Intergenic	Intergenic	-212988	NM_146052	218763	Mm.138039	NM_146052	ENSMUSG00000045201	Lrrc3b	BC019794|LRP15	leucine rich repeat containing 3B	protein-coding
common_peak2-24436-9-12--0.510826311736872-0.394412252720706	chr17	21516717	21517180	+	0	NA	Intergenic	Lx9|LINE|L1	-3764	NM_172486	210503	Mm.33443	NM_172486	ENSMUSG00000062743	Zfp677	A830058L05Rik|Tce8	zinc finger protein 677	protein-coding
common_peak2-27990-14-29--1.00767443525087-1.28534286439185	chr4	44167268	44168160	+	0	NA	intron (NM_175201, intron 1 of 10)	intron (NM_175201, intron 1 of 10)	12696	NM_175201	73469	Mm.262859	NM_175201	ENSMUSG00000035696	Rnf38	1700065B19Rik|2610202O07Rik|AA673263|Oip1	ring finger protein 38	protein-coding
common_peak1-18475-31-16-1.13777582956278-2.15838218998676	chr8	84751673	84752747	+	0	NA	Intergenic	Lx8|LINE|L1	174275	NM_001254747	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
unique_peak1-3232-9-4-0.867685311516858-1.36011389749466	chr18	61311861	61312323	+	0	NA	intron (NM_134134, intron 10 of 20)	intron (NM_134134, intron 10 of 20)	24611	NM_178277	106894	Mm.22574	NM_134134	ENSMUSG00000024622	Hmgxb3	2510002C16Rik|A630042L21Rik|AI413166|mKIAA0194	HMG box domain containing 3	protein-coding
unique_peak2-37764-4-6--0.830815435910851-0.989110657569874	chr5	115018984	115019331	+	0	NA	intron (NM_001004180, intron 1 of 2)	intron (NM_001004180, intron 1 of 2)	897	NM_001004180	433940	Mm.194212	NM_001004180	ENSMUSG00000041930	Fam222a	-	family with sequence similarity 222, member A	protein-coding
common_peak1-16054-24-22-0.269647946710704-0.457753417732779	chr5	43354742	43355757	+	0	NA	Intergenic	Intergenic	-269453	NM_175937	231207	Mm.7233	NM_175937	ENSMUSG00000039782	Cpeb2	A630055H10Rik|Cpe-bp2	cytoplasmic polyadenylation element binding protein 2	protein-coding
common_peak1-16587-9-23--1.39534909431694-1.67711336403294	chr5	148551406	148551907	+	0	NA	Intergenic	B1_Mur2|SINE|Alu	-14092	NM_010228	14254	Mm.389712	NM_010228	ENSMUSG00000029648	Flt1	AI323757|Flt-1|VEGFR-1|VEGFR1|sFlt1	FMS-like tyrosine kinase 1	protein-coding
unique_peak2-36047-14-18--0.348711353085941-0.360333814299795	chr19	46304228	46305192	+	0	NA	intron (NM_178930, intron 3 of 39)	B1F|SINE|Alu	-74517	NM_001177369	18034	Mm.102365	NM_019408	ENSMUSG00000025225	Nfkb2	NF-kappaB2|lyt|p49|p49/p100|p50B|p52	nuclear factor of kappa light polypeptide gene enhancer in B cells 2, p49/p100	protein-coding
common_peak1-18117-15-16--0.075298090694683-0.301029995663976	chr8	4237879	4238636	+	0	NA	promoter-TSS (NM_011944)	promoter-TSS (NM_011944)	-483	NM_011944	26400	Mm.3906	NM_011944	ENSMUSG00000002948	Map2k7	5930412N11Rik|JNKK 2|Jnkk2|MAPKK 7|MEK 7|Mapkk7|Mek7|Mkk7|Prkmk7|sek2	mitogen-activated protein kinase kinase 7	protein-coding
common_peak2-32200-17-31--0.781703661794962-0.932560489028298	chr9	119983102	119983957	+	0	NA	Intergenic	Intergenic	-6115	NM_009987	13051	Mm.44065	NM_009987	ENSMUSG00000052336	Cx3cr1	-	chemokine (C-X3-C motif) receptor 1	protein-coding
unique_peak2-34790-4-9--1.34538860874061-1.36011389749466	chr15	62501238	62501846	+	0	NA	Intergenic	MLT1F2|LTR|MaLR	-450536	NR_003523	67552	Mm.484027	NM_026230		H2afy3	4933432H23Rik	H2A histone family, member Y3	pseudo
common_peak1-18472-29-17-0.942365079172799-1.68242911687175	chr8	84689080	84689955	+	0	NA	Intergenic	Intergenic	236968	NM_001254747	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak2-23933-18-32--0.731474968130102-0.907815120698057	chr16	11253151	11254274	+	0	NA	TTS (NR_035466)	TTS (NR_035466)	706	NM_001130008	14852	Mm.325827	NM_146066		Gspt1	AI314175|AI326449|AV307676|C79774|G1st|Gst-1	G1 to S phase transition 1	protein-coding
unique_peak2-33750-3-7--1.41398308995928-1.23214870625617	chr11	117113990	117114304	+	0	NA	intron (NM_001113486, intron 2 of 11)	ORR1E|LTR|MaLR	-13413	NM_001113487	53860	Mm.38450	NM_017380	ENSMUSG00000059248	Sept9	MSF1|Msf|PNUTL4|Sint1	septin 9	protein-coding
common_peak1-19085-16-12-0.417823924126969-0.489164546851866	chr9	70838374	70839244	+	0	NA	Intergenic	Intergenic	-56194	NM_008280	15450	Mm.390187	NM_008280	ENSMUSG00000032207	Lipc	AI256194|HL|Hpl	lipase, hepatic	protein-coding
unique_peak1-1808-9-0-3.18961340640422-3.01029995663981	chr14	25540181	25540705	+	0	NA	Intergenic	L1_Mus3|LINE|L1	230540	NM_011297	20088	Mm.16775	NM_011297	ENSMUSG00000025290	Rps24	-	ribosomal protein S24	protein-coding
unique_peak1-3725-29-13-1.30493515855751-2.5745355257554	chr19	46483631	46485001	+	0	NA	intron (NM_001025391, intron 2 of 11)	B1F|SINE|Alu	12930	NM_015752	24069	Mm.41210	NM_015752	ENSMUSG00000025231	Sufu	Su(fu)	suppressor of fused homolog (Drosophila)	protein-coding
unique_peak2-35970-3-8--1.58390809140159-1.39487600375387	chr19	18811874	18812246	+	0	NA	Intergenic	Intergenic	-12413	NM_153417	225997	Mm.215171	NM_153417	ENSMUSG00000024727	Trpm6	CHAK2|TRPM6/CHAK2	transient receptor potential cation channel, subfamily M, member 6	protein-coding
common_peak1-14796-25-20-0.469532482566345-0.662033714151238	chr3	89962813	89963790	+	0	NA	intron (NM_029937, intron 15 of 39)	ID_B1|SINE|B4	54268	NM_001190258	100043813	Mm.270283	NM_001190258	ENSMUSG00000050621	Rps27rt	ENSMUSG00000050621|Gm9846|Rps27l2	ribosomal protein S27, retrogene	protein-coding
unique_peak2-35293-6-18--1.68252940306328-1.66449268468235	chr17	8147262	8147860	+	0	NA	intron (NM_025789, intron 2 of 7)	intron (NM_025789, intron 2 of 7)	9082	NM_025789	66832	Mm.29830	NM_025789	ENSMUSG00000073471	Rsph3a	1700012G05Rik|4930524H12Rik|R74860|Rshl2|Rshl2a	radial spoke 3A homolog (Chlamydomonas)	protein-coding
common_peak2-24677-8-17--1.16470258349474-1.02063122982878	chr17	40934062	40934754	+	0	NA	Intergenic	L1Md_T|LINE|L1	-3313	NM_009420	22024	Mm.1296	NM_009420	ENSMUSG00000023930	Crisp2	CRISP-2|GAPDL5|Tpx-1|Tpx1	cysteine-rich secretory protein 2	protein-coding
common_peak1-14135-9-26--1.56527409575925-2.17218792383888	chr2	131203816	131204437	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	-25498	NM_178607	51902	Mm.477523	NM_178607	ENSMUSG00000048911	Rnf24	2810473M14Rik|4930505A13Rik|AI317164|C86507|D2Ertd504e	ring finger protein 24	protein-coding
common_peak1-7768-29-38--0.173112138247138-0.327809114039775	chr1	92910601	92911510	+	0	NA	intron (NM_001111312, intron 1 of 12)	intron (NM_001111312, intron 1 of 12)	15751	NM_001111312	16978	Mm.45039	NM_008515	ENSMUSG00000026305	Lrrfip1	AU024550|Fliiap1	leucine rich repeat (in FLII) interacting protein 1	protein-coding
unique_peak1-2130-20-7-1.48807478459119-2.07034318903805	chr15	54317224	54318063	+	0	NA	Intergenic	ORR1E|LTR|MaLR	75314	NM_173422	239447	Mm.82400	NM_173422	ENSMUSG00000038591	Colec10	CL-L1	collectin sub-family member 10	protein-coding
unique_peak1-6276-40-9-2.33704758786374-7.34801627843291	chr7	27978501	27979781	+	0	NA	intron (NM_015782, intron 2 of 6)	intron (NM_015782, intron 2 of 6)	1638	NM_001046637	53607	Mm.386890	NM_015782	ENSMUSG00000061479	Snrpa	C430021M15Rik|Rnu1a-1|Rnu1a1|U1-A|U1A	small nuclear ribonucleoprotein polypeptide A	protein-coding
unique_peak1-826-7-0-2.79909083029819-2.40823996531185	chr11	8345014	8345401	+	0	NA	intron (NM_001083587, intron 25 of 30)	intron (NM_001083587, intron 25 of 30)	219331	NM_001083587	319939	Mm.337820	NM_001083587	ENSMUSG00000020422	Tns3	BC023928|F830010I22Rik|TEM6|Tens1	tensin 3	protein-coding
common_peak1-10244-9-20--1.20270401637454-1.23014042908325	chr13	54590496	54591015	+	0	NA	Intergenic	RMER10A|LTR|ERVL	-14411	NM_176987	319719	Mm.376151	NM_176987	ENSMUSG00000043183	Simc1	4732471D19Rik	SUMO-interacting motifs containing 1	protein-coding
common_peak2-31484-6-6--0.241956811677302-0.947717972411649	chr8	106577109	106577505	+	0	NA	Intergenic	Intergenic	-48218	NM_009868	12562	Mm.21767	NM_009868	ENSMUSG00000031871	Cdh5	7B4|AA408225|Cd144|VE-Cad|VECD|VEcad|Vec	cadherin 5	protein-coding
common_peak1-16478-48-50-0.298501809263319-0.626510224444022	chr5	137532975	137533968	+	0	NA	Intergenic	PB1D10|SINE|Alu	-11541	NM_007457	11769	Mm.833	NM_007457	ENSMUSG00000004849	Ap1s1	AP19	adaptor protein complex AP-1, sigma 1	protein-coding
common_peak1-15706-7-9--0.522837264589173-1.05908390183068	chr4	140629905	140630353	+	0	NA	intron (NM_025383, intron 2 of 7)	MER102a|DNA|MER1_type	4131	NM_025383	66147	Mm.21187	NM_025383	ENSMUSG00000028923	Necap2	1110005F07Rik|AA409105|C78898	NECAP endocytosis associated 2	protein-coding
unique_peak1-236-12-5-1.06381348436648-1.78669045979184	chr1	89771350	89771890	+	0	NA	intron (NM_177646, intron 1 of 29)	Lx4B|LINE|L1	21758	NM_177646	227333	Mm.277217	NM_177646	ENSMUSG00000070738	Dgkd	AI841987|D330025K09|DGKdelta|dgkd-2	diacylglycerol kinase, delta	protein-coding
common_peak1-7975-24-7-1.79320990276772-3.23080944932562	chr1	157380212	157381130	+	0	NA	Intergenic	Intergenic	-24579	NM_001145781	72482	Mm.288249	NM_026683	ENSMUSG00000033701	Acbd6	0610010G04Rik|2610100E10Rik	acyl-Coenzyme A binding domain containing 6	protein-coding
common_peak1-16199-10-11--0.228547155712387-0.31137425193576	chr5	92809125	92809660	+	0	NA	intron (NM_181728, intron 2 of 9)	Lx7|LINE|L1	-17070	NR_038116	56066	Mm.131723	NM_019494	ENSMUSG00000060183	Cxcl11	Cxc11|H174|I-tac|Ip9|Itac|Scyb11|Scyb9b|b-R1|betaR1	chemokine (C-X-C motif) ligand 11	protein-coding
common_peak2-26984-88-97-0.400702565055324-1.28823262083997	chr2	167788860	167790677	+	0	NA	intron (NM_011201, intron 2 of 8)	intron (NM_011201, intron 2 of 8)	31941	NM_011201	19246	Mm.277916	NM_011201	ENSMUSG00000027540	Ptpn1	PTP-1B|PTP-HA2|PTP1B	protein tyrosine phosphatase, non-receptor type 1	protein-coding
common_peak1-14419-11-14--0.398197011356905-0.379391706698377	chr2	180214883	180215489	+	0	NA	Intergenic	Intergenic	-19495	NM_018766	18216	Mm.301712	NM_018766	ENSMUSG00000027568	Ntsr1	NT-1R|NTR-1|NTR1	neurotensin receptor 1	protein-coding
common_peak2-29980-8-15--0.994777582052429-0.771068449301683	chr6	120463052	120463750	+	0	NA	intron (NM_144815, intron 6 of 7)	ORR1B1|LTR|MaLR	17916	NM_144815	214932	Mm.255322	NM_144815	ENSMUSG00000058979	Cecr5	A930002G03Rik	cat eye syndrome chromosome region, candidate 5	protein-coding
common_peak2-21000-57-83--0.126284382699832-0.34989958244832	chr11	23665289	23666915	+	0	NA	intron (NM_009044, intron 1 of 9)	intron (NM_009044, intron 1 of 9)	4868	NM_009044	19696	Mm.4869	NM_009044	ENSMUSG00000020275	Rel	c-Rel	reticuloendotheliosis oncogene	protein-coding
common_peak2-28867-30-36--0.039777956137077-0.301029995663973	chr5	76183584	76184921	+	0	NA	Intergenic	Intergenic	190201	NM_010612	16542	Mm.285	NM_010612	ENSMUSG00000062960	Kdr	6130401C07|Flk-1|Flk1|Krd-1|Ly73|VEGFR-2|VEGFR2|sVEGFR-2	kinase insert domain protein receptor	protein-coding
common_peak2-27508-35-50--0.241055083508991-0.415549183621393	chr3	95227947	95229837	+	0	NA	Intergenic	IAPEY3-int|LTR|ERVK	-2379	NR_033637	100043305	Mm.412052	NR_033637		Gm4349	-	SET domain, bifurcated 1 pseudogene	pseudo
common_peak1-19402-12-15--0.351224014912361-0.332077462497413	chrX	69360300	69360880	+	0	NA	Intergenic	L1_Mus2|LINE|L1	-106766	NM_020280	17140	Mm.377097	NM_020280	ENSMUSG00000033343	Magea4	Mage-a4	melanoma antigen, family A, 4	protein-coding
unique_peak2-37979-3-4--0.73591118484664-0.864171920961574	chr6	3399308	3399577	+	0	NA	Intergenic	MTA_Mm-int|LTR|MaLR	45056	NM_178899	101202	Mm.206911	NM_178899	ENSMUSG00000044156	Hepacam2	AI987662	HEPACAM family member 2	protein-coding
unique_peak2-33116-6-15--1.4346018896197-1.16633110333236	chr10	81233120	81233667	+	0	NA	intron (NM_199062, intron 1 of 3)	intron (NM_199062, intron 1 of 3)	494	NM_199062	331188	Mm.351497	NM_199062		Zfp781	A130081B01	zinc finger protein 781	protein-coding
common_peak2-30211-42-60--0.188408009695703-0.369634502458893	chr7	118242682	118243812	+	0	NA	Intergenic	Intergenic	-16703	NM_013507	13690	Mm.185453	NM_013507	ENSMUSG00000005610	Eif4g2	AA589388|DAP-5|E130105L11Rik|Nat1|Natm1|p97	eukaryotic translation initiation factor 4, gamma 2	protein-coding
common_peak1-8665-10-12--0.344024373132323-0.340565874754526	chr10	128410597	128411110	+	0	NA	Intergenic	L1M4|LINE|L1	-12809	NM_027853	71664	Mm.337232	NM_027853	ENSMUSG00000025347	Mettl7b	0610006F02Rik|AI266817	methyltransferase like 7B	protein-coding
common_peak2-20785-11-9-0.186765489364251-0.344532117358383	chr10	120616896	120617391	+	0	NA	Intergenic	Intergenic	131102	NM_029057	74694	Mm.233833	NM_029057	ENSMUSG00000052302	Tbc1d30	4930505D03Rik	TBC1 domain family, member 30	protein-coding
unique_peak1-3290-9-5-0.604650905683064-1.21398586181642	chr18	75372514	75372966	+	0	NA	intron (NM_027727, intron 14 of 16)	RMER17C|LTR|ERVK	84231	NR_045394	100503117	Mm.250517	NR_045393		2010010A06Rik	5033420E22Rik	RIKEN cDNA 2010010A06 gene	ncRNA
unique_peak2-36696-11-19--0.813234510635749-0.769930178837768	chr3	36475125	36475827	+	0	NA	intron (NM_027810, intron 15 of 18)	L1_Mur3|LINE|L1	-4558	NM_009828	12428	Mm.4189	NM_009828	ENSMUSG00000027715	Ccna2	AA408589|Ccn-1|Ccn1|Ccna|CycA2|Cyca	cyclin A2	protein-coding
common_peak1-16882-34-13-1.57471360494366-3.79546561170023	chr6	71143851	71144639	+	0	NA	Intergenic	Intergenic	-5637	NM_017399	14080	Mm.22126	NM_017399	ENSMUSG00000054422	Fabp1	Fabpl|L-FABP	fatty acid binding protein 1, liver	protein-coding
common_peak2-23172-43-116--1.0878015340597-5.13189904965243	chr15	53344996	53346965	+	0	NA	intron (NM_177225, intron 4 of 4)	intron (NM_177225, intron 4 of 4)	-168242	NM_010162	14042	Mm.309395	NM_010162		Ext1	AA409028	exostoses (multiple) 1	protein-coding
common_peak2-23699-109-68-1.27763522510903-9.64638808851208	chr15	88854718	88856453	+	0	NA	intron (NM_031260, intron 21 of 26)	intron (NM_031260, intron 21 of 26)	-34571	NM_001002005	406218	Mm.483059	NM_001002005	ENSMUSG00000058441	Panx2	-	pannexin 2	protein-coding
common_peak2-25192-4-10--1.48289213249054-1.5150158574804	chr18	57836442	57836841	+	0	NA	intron (NM_029290, intron 6 of 6)	Lx8|LINE|L1	-38402	NR_045360	70157	Mm.490532	NR_045360		2210409D07Rik	-	RIKEN cDNA 2210409D07 gene	ncRNA
common_peak2-22344-27-50--0.680879391076259-1.16605326768361	chr13	23745659	23746588	+	0	NA	Intergenic	Intergenic	29705	NM_178189	319164	Mm.261973	NM_178189	ENSMUSG00000069270	Hist1h2ac	-	histone cluster 1, H2ac	protein-coding
unique_peak2-37366-5-9--1.02630843089322-1.21398586181642	chr4	136177730	136178189	+	0	NA	promoter-TSS (NM_001243262)	promoter-TSS (NM_001243262)	-577	NM_001243262	242707	Mm.448979	NM_001243262	ENSMUSG00000070683	Lactbl1	-	lactamase, beta-like 1	protein-coding
common_peak2-31610-5-7--0.704380336005853-1.01466476204226	chr8	122582701	122583100	+	0	NA	Intergenic	MTC-int|LTR|MaLR	42472	NM_133967	102193	Mm.240076	NM_133967	ENSMUSG00000031823	Zdhhc7	AL024087|Gramp2	zinc finger, DHHC domain containing 7	protein-coding
common_peak1-14304-95-163--0.20963665959407-0.615252092647737	chr2	160645814	160647233	+	0	NA	intron (NM_177263, intron 2 of 3)	L1Md_T|LINE|L1	52203	NM_177263	320799	Mm.436734	NM_177263	ENSMUSG00000035877	Zhx3	1810059C13Rik|4932418O04Rik|9530010N21Rik|Tix1|mKIAA0395	zinc fingers and homeoboxes 3	protein-coding
unique_peak1-4234-17-2-2.63333383748388-3.75443312462699	chr2	124724609	124725489	+	0	NA	Intergenic	Intergenic	-168814	NM_175034	317750	Mm.330538	NM_175034	ENSMUSG00000035183	Slc24a5	F630045L20Rik|JSX|NCKX5|NCX5|Oca6	solute carrier family 24, member 5	protein-coding
common_peak1-8419-17-11-0.633333837483882-0.769930178837768	chr10	75517128	75518002	+	0	NA	Intergenic	ETnERV2-int|LTR|ERVK	22208	NM_177475	64453	Mm.80609	NM_177475	ENSMUSG00000049764	Zfp280b	D10Jhu82e|Suhw2	zinc finger protein 280B	protein-coding
common_peak1-15484-58-72-0.106125376010479-0.371520254652761	chr4	108779526	108780950	+	0	NA	intron (NM_133885, intron 4 of 22)	intron (NM_133885, intron 4 of 22)	10403	NM_173350	100273	Mm.366315	NM_133885	ENSMUSG00000028559	Osbpl9	2600011I06Rik|AU015843|Orp-9	oxysterol binding protein-like 9	protein-coding
unique_peak1-4128-30-8-1.99975040804956-4.4860419630448	chr2	90583843	90585123	+	0	NA	Intergenic	Intergenic	-1044	NM_018828	55935	Mm.489638	NM_018828	ENSMUSG00000008200	Fnbp4	FBP30|Fnbp30|mKIAA1014	formin binding protein 4	protein-coding
unique_peak2-39070-6-10--0.894033508256995-1.21398586181642	chr8	72474687	72475174	+	0	NA	intron (NM_145596, intron 1 of 12)	intron (NM_145596, intron 1 of 12)	23352	NM_001113346	234366	Mm.270044	NM_145596	ENSMUSG00000036180	Gatad2a	1110066C11Rik|BC031407|C80248	GATA zinc finger domain containing 2A	protein-coding
common_peak1-9585-35-18-1.18344274501892-2.59278847729176	chr11	118430639	118431959	+	0	NA	intron (NM_001285436, intron 3 of 13)	CpG	93025	NM_172573	217364	Mm.473963	NM_172573	ENSMUSG00000033857	Engase	C130099A03|D230014K01Rik	endo-beta-N-acetylglucosaminidase	protein-coding
common_peak2-31144-44-59--0.0849977610399835-0.308518202581802	chr8	40307491	40308559	+	0	NA	Intergenic	Lx4A|LINE|L1	-75309	NR_044988	621335	Mm.208080	NR_044988		Gm6213	EG621335	predicted gene 6213	ncRNA
common_peak2-27955-12-7-0.648775985087639-0.697979855752659	chr4	39088643	39089111	+	0	NA	Intergenic	L1VL4|LINE|L1	-308449	NM_001081095	75471	Mm.23522	NM_001081095	ENSMUSG00000028287	1700009N14Rik	AI429145	RIKEN cDNA 1700009N14 gene	protein-coding
common_peak1-8204-6-9--0.75652998450706-1.11707584880836	chr10	5207920	5208313	+	0	NA	intron (NM_001079686, intron 16 of 54)	L1Md_F|LINE|L1	56282	NM_001079686	64009	Mm.331626	NM_022027	ENSMUSG00000019769	Syne1	8B|A330049M09Rik|BE692247|C130039F11Rik|CPG2|Myne1|mKIAA1756	spectrin repeat containing, nuclear envelope 1	protein-coding
unique_peak2-34171-7-9--0.522837264589173-1.05908390183068	chr13	32802422	32802836	+	0	NA	intron (NM_001166030, intron 10 of 11)	MER46C|DNA|MER2_type	71019	NM_001166030	238564	Mm.60041	NM_001166030	ENSMUSG00000044951	Mylk4	EG238564	myosin light chain kinase family, member 4	protein-coding
common_peak1-10001-37-53--0.228894430677649-0.408596647434913	chr13	3609905	3611330	+	0	NA	promoter-TSS (NM_134063)	promoter-TSS (NM_134063)	-263	NM_134063	105203	Mm.221609	NM_134063	ENSMUSG00000033799	Fam208b	AI645998|Pap20|mKIAA2006	family with sequence similarity 208, member B	protein-coding
unique_peak1-6667-12-0-3.64877598508764-4.21441993929574	chr8	18747032	18747666	+	0	NA	intron (NM_173189, intron 12 of 13)	intron (NM_173189, intron 12 of 13)	-5787	NM_007426	11601	Mm.439874	NM_007426	ENSMUSG00000031465	Angpt2	Agpt2|Ang-2|Ang2	angiopoietin 2	protein-coding
unique_peak2-33563-7-9--0.522837264589173-1.05908390183068	chr11	84080051	84080532	+	0	NA	intron (NM_133360, intron 22 of 53)	intron (NM_133360, intron 22 of 53)	71351	NM_133360	107476	Mm.31374	NM_133360	ENSMUSG00000020532	Acaca	A530025K05Rik|Acac|Acc1|Gm738	acetyl-Coenzyme A carboxylase alpha	protein-coding
common_peak1-9348-35-29-0.524479662853985-0.895935469411238	chr11	96967320	96968752	+	0	NA	intron (NM_019507, intron 1 of 5)	PB1D9|SINE|Alu	8609	NM_019507	57765	Mm.94519	NM_019507	ENSMUSG00000001444	Tbx21	TBT1|Tbet|Tblym	T-box 21	protein-coding
common_peak2-21058-40-81--0.698576321866986-1.79459601430274	chr11	46436776	46437944	+	0	NA	intron (NM_001163358, intron 2 of 5)	intron (NM_001163358, intron 2 of 5)	5416	NM_178247	347708	Mm.18119	NM_178247		Dppa1	C77727	developmental pluripotency associated 1	protein-coding
common_peak2-23028-9-8-0.0196884049619079-1.03275496310833	chr14	65374177	65374542	+	0	NA	intron (NM_001081177, intron 21 of 39)	AT_rich|Low_complexity|Low_complexity	102991	NM_001081177	16554	Mm.23611	NM_001081177	ENSMUSG00000060012	Kif13b	5330429L19Rik|6030414C01|AI429803|C130021D12Rik|GAKIN	kinesin family member 13B	protein-coding
unique_peak1-5105-15-10-0.552733131918359-0.604422558181019	chr4	151988252	151989036	+	0	NA	Intergenic	Intergenic	-83005	NR_033138	330004	Mm.291863	NM_001033414		Gm833	-	predicted gene 833	ncRNA
common_peak1-13546-10-14--0.550475250599749-0.446472590016315	chr2	3748940	3749446	+	0	NA	Intergenic	Intergenic	118463	NM_025626	66540	Mm.277864	NM_025626	ENSMUSG00000026655	Fam107b	3110001A13Rik|AA589595|AA959793|AI132312	family with sequence similarity 107, member B	protein-coding
unique_peak2-39604-7-16--1.28837201095215-1.08658567012551	chr9	79793628	79794133	+	0	NA	intron (NM_001081243, intron 1 of 5)	intron (NM_001081243, intron 1 of 5)	31809	NM_001081243	70598	Mm.23049	NM_001081243	ENSMUSG00000034898	Filip1	5730485H21Rik|AI843021	filamin A interacting protein 1	protein-coding
common_peak1-11905-8-17--1.16470258349474-1.02063122982878	chr17	24936352	24936873	+	0	NA	Intergenic	RLTR28B|LTR|ERVL	-4715	NM_029197	75178	Mm.52592	NM_029197	ENSMUSG00000024155	Meiob	4930528F23Rik|MLZ-675	meiosis specific with OB domains	protein-coding
common_peak1-14168-12-18--0.599151528355947-0.476916024233333	chr2	140670844	140671501	+	0	NA	intron (NM_001013802, intron 4 of 18)	intron (NM_001013802, intron 4 of 18)	-173960	NM_178382	71436	Mm.426781	NM_178382	ENSMUSG00000051379	Flrt3	5530600M07Rik|C430047I10Rik|mKIAA1469	fibronectin leucine rich transmembrane protein 3	protein-coding
common_peak2-20148-11-16--0.578769256998726-0.503257505534083	chr1	168501559	168502347	+	0	NA	Intergenic	Intergenic	-74234	NM_001164306	226601	Mm.475593	NM_001164306	ENSMUSG00000086056	Gm4846	EG226601|Fmo13	predicted gene 4846	protein-coding
common_peak2-25593-13-11-0.193509529916613-0.379391706698377	chr19	8722793	8723148	+	0	NA	Intergenic	(CCA)n|Simple_repeat|Simple_repeat	14855	NR_045314	402757	Mm.150255	NR_045314		9830166K06Rik	-	RIKEN cDNA 9830166K06 gene	ncRNA
unique_peak2-38869-6-10--0.894033508256995-1.21398586181642	chr8	61341193	61341793	+	0	NA	intron (NM_175032, intron 1 of 11)	B3|SINE|B2	48931	NM_175032	270049	Mm.236368	NM_175032		Galntl6	1700021K10Rik|4930431L04Rik|A830023L05	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 6	protein-coding
common_peak1-17921-10-5-0.771452844287613-1.33892459842472	chr7	126628311	126628847	+	0	NA	Intergenic	PB1D7|SINE|Alu	-5803	NM_001278605	22242	Mm.10826	NM_009470	ENSMUSG00000030963	Umod	THP|Urehd1|urehr4	uromodulin	protein-coding
unique_peak1-5318-41-8-2.53122370340635-8.13064847742934	chr5	77383053	77384279	+	0	NA	intron (NM_025939, intron 1 of 8)	RMER6A|LTR|ERVK	-3063	NM_172146	231327	Mm.202337	NM_172146	ENSMUSG00000029246	Ppat	5730454C12Rik|AA408689|AA675351|AI507113|C79945	phosphoribosyl pyrophosphate amidotransferase	protein-coding
common_peak1-18155-38-54--0.20990705422613-0.377714458142987	chr8	11757686	11758978	+	0	NA	promoter-TSS (NM_001113518)	promoter-TSS (NM_001113518)	2	NM_001113518	54126	Mm.244068	NM_017402	ENSMUSG00000031511	Arhgef7	Cool|PIX|Pak3bp|betaPix|betaPix-b|betaPix-c|cool-1|mKIAA0142|p85Cool1|p85SPR	Rho guanine nucleotide exchange factor (GEF7)	protein-coding
common_peak2-25665-2-8--2.08737925770563-1.65811743852845	chr19	10565764	10566278	+	0	NA	Intergenic	B4|SINE|B4	-8634	NM_133689	67752	Mm.25939	NM_133689	ENSMUSG00000035179	Ppp1r32	4930579J09Rik|AU015816|IIIG9|IIIG9L|IIIG9S	protein phosphatase 1, regulatory subunit 32	protein-coding
common_peak2-20082-24-22-0.269647946710704-0.457753417732779	chr1	155076209	155076732	+	0	NA	intron (NM_010683, intron 22 of 27)	intron (NM_010683, intron 22 of 27)	-42893	NM_008485	16782	Mm.329272	NM_008485	ENSMUSG00000026479	Lamc2	AA589349	laminin, gamma 2	protein-coding
unique_peak2-37375-13-25--0.921967687503323-0.983972868822056	chr4	137955298	137956127	+	0	NA	Intergenic	MTC|LTR|MaLR	-3339	NM_001081672	625638	Mm.379091	NM_001081672	ENSMUSG00000078235	Fam43b	OTTMUSG00000009974	family with sequence similarity 43, member B	protein-coding
unique_peak1-2327-15-6-1.20480982849805-1.32521814697968	chr15	83434217	83434874	+	0	NA	3' UTR (NM_001271473, exon 20 of 20)	3' UTR (NM_001271473, exon 20 of 20)	-8958	NM_183017	223723	Mm.46778	NM_183017	ENSMUSG00000016757	Ttll12	BC055368|D430005B17	tubulin tyrosine ligase-like family, member 12	protein-coding
unique_peak2-39927-4-6--0.830815435910851-0.989110657569874	chrX	105079711	105080137	+	0	NA	Intergenic	Lx2|LINE|L1	63851	NM_001033252	213450	Mm.300779	NM_001033252	ENSMUSG00000073006	Gm732	-	predicted gene 732	protein-coding
common_peak2-23515-15-9-0.690236655668294-0.732381977911291	chr15	76780289	76780800	+	0	NA	intron (NM_054099, intron 3 of 3)	intron (NM_054099, intron 3 of 3)	1570	NM_054099	117171	Mm.322968	NM_054099		1110038F14Rik	-	RIKEN cDNA 1110038F14 gene	protein-coding
common_peak2-24567-10-12--0.344024373132323-0.340565874754526	chr17	29439393	29440074	+	0	NA	TTS (NM_030561)	TTS (NM_030561)	-16094	NM_023734	74116	Mm.30950	NM_023734	ENSMUSG00000024011	Pi16	1200009H11Rik|Cripi|PI-16	peptidase inhibitor 16	protein-coding
unique_peak2-35344-6-7--0.434601889619698-0.97990265578305	chr17	24617718	24618085	+	0	NA	Intergenic	Intergenic	-1878	NM_019988	56716	Mm.289516	NM_019988	ENSMUSG00000024142	Mlst8	0610033N12Rik|AA409454|AI505104|AI851821|Gbl	MTOR associated protein, LST8 homolog (S. cerevisiae)	protein-coding
common_peak1-16332-22-26--0.107603397076064-0.30528805757448	chr5	117286749	117287659	+	0	NA	Intergenic	MTD|LTR|MaLR	-245378	NM_026886	68955	Mm.146779	NM_026886	ENSMUSG00000063919	Srrm4	1500001A10Rik|B230202K19Rik|bv|mKIAA1853|nSR100	serine/arginine repetitive matrix 4	protein-coding
common_peak1-17825-30-25-0.469235691350781-0.734130039933318	chr7	105735604	105736817	+	0	NA	Intergenic	Intergenic	68869	NM_172280	233545	Mm.387819	NM_172280	ENSMUSG00000035401	2210018M11Rik	2310016L09Rik|AU019521|AU019557|Emsy	RIKEN cDNA 2210018M11 gene	protein-coding
common_peak2-23163-10-7-0.356415345008769-1.12966497611638	chr14	121825091	121825507	+	0	NA	Intergenic	RMER10B|LTR|ERVL	-46847	NM_145465	223255	Mm.390756	NM_145465	ENSMUSG00000063410	Stk24	1810013H02Rik|C76483|MST-3|Mst3|STE20	serine/threonine kinase 24	protein-coding
unique_peak1-7420-15-8-0.842239749113344-0.891319708951327	chrX	150587530	150588196	+	0	NA	exon (NM_001243032, exon 3 of 3)	exon (NM_001243032, exon 3 of 3)	3567	NM_001243032	635580	Mm.359509	NM_001243032		Gm16445	EG667285	predicted pseudogene 16445	protein-coding
common_peak1-9105-43-43-0.323131566886405-0.62090566497527	chr11	70699726	70701550	+	0	NA	exon (NM_019400, exon 4 of 18)	exon (NM_019400, exon 4 of 18)	42375	NM_001291142	54189	Mm.7087	NM_019400	ENSMUSG00000020817	Rabep1	Rab5ep|rabaptin-5|rabaptin-5alpha	rabaptin, RAB GTPase binding effector protein 1	protein-coding
common_peak1-7672-12-19--0.673152109799724-0.546772548767014	chr1	75479143	75479729	+	0	NA	exon (NM_177056, exon 3 of 5)	exon (NM_177056, exon 3 of 5)	3329	NM_177056	319998	Mm.44401	NM_177056	ENSMUSG00000051703	Tmem198	A230078I05Rik|Tmem198-1|Tmem198a	transmembrane protein 198	protein-coding
unique_peak2-36484-4-7--1.02346051385325-1.09384600808989	chr2	151962687	151963061	+	0	NA	Intergenic	Intergenic	-6471	NM_009328	21407	Mm.3881	NM_009328	ENSMUSG00000068079	Tcf15	Meso1|bHLH-EC2	transcription factor 15	protein-coding
common_peak1-15592-42-50-0.0699039858956887-0.334445504886124	chr4	129794609	129796045	+	0	NA	intron (NM_026441, intron 1 of 4)	RLTR25B|LTR|ERVK	10527	NM_026441	67898	Mm.20818	NM_026441	ENSMUSG00000028779	Pef1	2600002E23Rik|Peflin	penta-EF hand domain containing 1	protein-coding
common_peak2-28669-11-7-0.508693584251613-1.21681515183528	chr5	31967544	31968048	+	0	NA	intron (NM_153196, intron 4 of 7)	intron (NM_153196, intron 4 of 7)	1917	NR_105859	102466677		NR_105859		Mir3473e	mmu-mir-3473e	microRNA mir-3473e	ncRNA
unique_peak1-2871-10-4-1.03448725012141-1.5150158574804	chr17	35211083	35211631	+	0	NA	promoter-TSS (NM_033478)	promoter-TSS (NM_033478)	52	NM_033478	114654	Mm.246697	NM_033478		Ly6g6d	A930024F17Rik|G6d|G6f|MEGT1|NG25|NG32	lymphocyte antigen 6 complex, locus G6D	protein-coding
unique_peak1-4931-11-10-0.0492619656143161-0.31137425193576	chr4	62518387	62519076	+	0	NA	Intergenic	Intergenic	-107877	NM_028326	72701	Mm.26479	NM_028326	ENSMUSG00000028358	Zfp618	2810031P15Rik|2810040O04Rik|AI415580|AI505139|D430033D05Rik|Nedd10|Znf618|bM257P7.1	zinc finger protein 618	protein-coding
common_peak2-20796-46-68--0.210528513529368-0.409674412769129	chr10	122046507	122047885	+	0	NA	Intergenic	B3|SINE|B2	-40249	NR_040616	319272	Mm.411763	NR_040616		A130077B15Rik	-	RIKEN cDNA A130077B15 gene	ncRNA
common_peak2-30690-49-70--0.143463296479498-0.359387569720008	chr7	110061681	110062355	+	0	NA	Intergenic	Intergenic	-3667	NM_147085	259089	Mm.377834	NM_147085	ENSMUSG00000043310	Olfr571	MOR21-1	olfactory receptor 571	protein-coding
common_peak1-8223-10-30--1.59778096537811-2.57346781069461	chr10	9900494	9901022	+	0	NA	Intergenic	Intergenic	-279920	NM_001081344	78808	Mm.331751	NM_030191	ENSMUSG00000019790	Stxbp5	0710001E20Rik|4930565N16Rik|AW742610|LGL3|mKIAA1006	syntaxin binding protein 5 (tomosyn)	protein-coding
common_peak2-26182-38-23-0.986490158577374-2.25413655118513	chr2	24918715	24919606	+	0	NA	TTS (NM_001039387)	TTS (NM_001039387)	9261	NM_001177655	56876	Mm.42956	NM_020276	ENSMUSG00000006476	Nsmf	Jacob|Nelf	NMDA receptor synaptonuclear signaling and neuronal migration factor	protein-coding
unique_peak2-36920-8-11--0.579740082773585-1.14218153353838	chr3	101047424	101048041	+	0	NA	Intergenic	Intergenic	44130	NM_013486	12481	Mm.22842	NM_013486	ENSMUSG00000027863	Cd2	LFA-2|Ly-37|Ly37	CD2 antigen	protein-coding
common_peak1-14535-116-197--0.135227286570188-0.467546805829862	chr3	30792556	30794126	+	0	NA	intron (NM_001286994, intron 3 of 3)	intron (NM_001286994, intron 3 of 3)	38469	NM_001286994	71862	Mm.272019	NM_027965	ENSMUSG00000037661	Gpr160	1700025D19Rik|GPCR150	G protein-coupled receptor 160	protein-coding
unique_peak1-6038-7-3-0.799090830298189-1.23214870625617	chr6	115280964	115281483	+	0	NA	Intergenic	MTE2a|LTR|MaLR	-30016	NM_001127330	19016	Mm.3020	NM_011146	ENSMUSG00000000440	Pparg	Nr1c3|PPAR-gamma|PPAR-gamma2|PPARgamma|PPARgamma2	peroxisome proliferator activated receptor gamma	protein-coding
unique_peak1-1074-9-0-3.18961340640422-3.01029995663981	chr11	86099280	86099836	+	0	NA	intron (NM_001080931, intron 20 of 29)	(CA)n|Simple_repeat|Simple_repeat	-28488	NM_027421	70422	Mm.171304	NM_027421	ENSMUSG00000018068	Ints2	2810417D08Rik|AA408260|AI987735|mKIAA1287	integrator complex subunit 2	protein-coding
unique_peak1-975-9-2-1.60465090568306-1.87199725847353	chr11	62629474	62630023	+	0	NA	Intergenic	L1MB2|LINE|L1	-4007	NM_053169	94092	Mm.117087	NM_053169	ENSMUSG00000047821	Trim16	9130006M08Rik|AI482483|EBBP	tripartite motif-containing 16	protein-coding
unique_peak1-1800-7-1-1.79909083029819-1.80617997398389	chr14	25345435	25345868	+	0	NA	Intergenic	Intergenic	35748	NM_011297	20088	Mm.16775	NM_011297	ENSMUSG00000025290	Rps24	-	ribosomal protein S24	protein-coding
common_peak2-28749-101-166--0.129690055737632-0.416102246974924	chr5	38560590	38563149	+	0	NA	Intergenic	MLT1D|LTR|MaLR	-11163	NM_010942	18196	Mm.7414	NM_010942	ENSMUSG00000029126	Nsg1	Neep21|m234|p21	neuron specific gene family member 1	protein-coding
common_peak1-12345-8-8--0.164702583494742-1.00793137938329	chr17	56110408	56110902	+	0	NA	intron (NM_001159523, intron 1 of 6)	intron (NM_001159523, intron 1 of 6)	750	NM_009168	20420	Mm.20908	NM_009168	ENSMUSG00000039154	Shd	AI413439	src homology 2 domain-containing transforming protein D	protein-coding
unique_peak1-5393-9-1-2.18961340640422-2.31132995230379	chr5	103734559	103734984	+	0	NA	Intergenic	L1ME2|LINE|L1	-6723	NR_040699	74624	Mm.389662	NR_040699		4930429D17Rik	-	RIKEN cDNA 4930429D17 gene	ncRNA
unique_peak1-2862-9-2-1.60465090568306-1.87199725847353	chr17	33999629	34000207	+	0	NA	Intergenic	AT_rich|Low_complexity|Low_complexity	19882	NM_019421	54219	Mm.11175	NM_019421	ENSMUSG00000002308	Cd320	425O18-1|8D6|CD320-002|D17Ertd716e|NG29|VLDL	CD320 antigen	protein-coding
common_peak2-20912-10-8-0.186490343566457-1.078512453669	chr11	5520361	5520817	+	0	NA	intron (NM_023816, intron 15 of 26)	B3|SINE|B2	50902	NM_023816	76389	Mm.67300	NM_023816	ENSMUSG00000020481	Ankrd36	1700008J08Rik|1700012M14Rik|Ankrd48	ankyrin repeat domain 36	protein-coding
unique_peak2-33393-4-13--1.83081543591085-2.04196296489515	chr11	50376884	50377377	+	0	NA	Intergenic	RMER15|LTR|ERVL	-38457	NM_001277305	216725	Mm.110597	NM_175643	ENSMUSG00000036545	Adamts2	ADAM-TS2|ADAMTS-2|ADAMTS-3|PCINP|hPCPNI|mKIAA4060|pNPI	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 2	protein-coding
common_peak2-25167-8-29--1.90166817766095-3.04993787975775	chr18	53521576	53522379	+	0	NA	intron (NM_029394, intron 3 of 6)	intron (NM_029394, intron 3 of 6)	55684	NM_008908	19038	Mm.4587	NM_008908	ENSMUSG00000024538	Ppic	CyP-20c	peptidylprolyl isomerase C	protein-coding
unique_peak1-2596-11-1-2.50869358425161-2.83420869758413	chr16	32058933	32059666	+	0	NA	intron (NM_177326, intron 1 of 14)	intron (NM_177326, intron 1 of 14)	20129	NM_177326	224105	Mm.234204	NM_177326	ENSMUSG00000022781	Pak2	5330420P17Rik|A130002K10Rik|AI836325|D16Ertd269e|PAK-2|mKIAA4182	p21 protein (Cdc42/Rac)-activated kinase 2	protein-coding
common_peak2-25111-14-8-0.729291158915332-0.771068449301682	chr18	37824994	37825313	+	0	NA	intron (NM_033584, intron 1 of 3)	L1Md_T|LINE|L1	3554	NM_033584	93709	Mm.247203	NM_033584		Pcdhga1	-	protocadherin gamma subfamily A, 1	protein-coding
common_peak2-31649-10-9-0.0344872501214071-1.05503135781948	chr8	125293237	125293696	+	0	NA	Intergenic	Intergenic	-5939	NM_144932	257633	Mm.334875	NM_144932	ENSMUSG00000015016	Acsf3	BB101783	acyl-CoA synthetase family member 3	protein-coding
unique_peak2-34013-5-11--1.28934283672701-1.477227296591	chr12	104856315	104856999	+	0	NA	intron (NM_144834, intron 4 of 4)	L1Md_T|LINE|L1	12958	NM_144834	217847	Mm.29094	NM_144834	ENSMUSG00000061947	Serpina10	PZI|ZPI	serine (or cysteine) peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10	protein-coding
common_peak1-11847-44-48-0.207182990453327-0.468749305398715	chr16	90220413	90221834	+	0	NA	exon (NM_011434, exon 1 of 5)	exon (NM_011434, exon 1 of 5)	136	NM_011434	20655	Mm.276325	NM_011434	ENSMUSG00000022982	Sod1	B430204E11Rik|Cu/Zn-SOD|CuZnSOD|Ipo-1|Ipo1|SODC|Sod-1	superoxide dismutase 1, soluble	protein-coding
common_peak1-10617-22-34--0.481998911857562-0.600314449189972	chr14	33446581	33447163	+	0	NA	intron (NM_001001796, intron 5 of 6)	intron (NM_001001796, intron 5 of 6)	33759	NM_001001796	107751	Mm.119274	NM_001001796	ENSMUSG00000041730	Prrxl1	Drg11|Drgx	paired related homeobox protein-like 1	protein-coding
common_peak1-10306-33-36-0.121884196896579-0.346766333527252	chr13	66904706	66905928	+	0	NA	Intergenic	L1Md_T|LINE|L1	100969	NM_026219	67530	Mm.379136	NM_026219	ENSMUSG00000021520	Uqcrb	2210415M14Rik|QP-C|QPC|UQBC|UQBP|UQPC	ubiquinol-cytochrome c reductase binding protein	protein-coding
unique_peak2-37331-2-9--2.23938235115068-1.87199725847353	chr4	130174635	130175161	+	0	NA	Intergenic	(TTTC)n|Simple_repeat|Simple_repeat	-44376	NM_030722	80912	Mm.440206	NM_030722	ENSMUSG00000028580	Pum1	AA517475|Pumm|mKIAA0099	pumilio RNA-binding family member 1	protein-coding
common_peak2-23944-26-44--0.563954004171213-0.879657821688435	chr16	13780057	13781248	+	0	NA	promoter-TSS (NM_001039521)	promoter-TSS (NM_001039521)	-140	NM_001039521	106298	Mm.490362	NM_001039521	ENSMUSG00000022682	Rrn3	AL023001|E130302O19Rik|R75565|TIF-1A|Tif1a	RRN3 RNA polymerase I transcription factor homolog (yeast)	protein-coding
unique_peak2-34272-3-9--1.73591118484664-1.57096726280955	chr13	67399160	67399624	+	0	NA	intron (NM_001003666, intron 1 of 3)	RLTRETN_Mm|LTR|ERVK	7956	NM_001003666	431706	Mm.439456	NM_001003666	ENSMUSG00000055341	Zfp457	Rslcan-6	zinc finger protein 457	protein-coding
common_peak1-18241-24-11-1.20824740204656-1.9654245668484	chr8	32199936	32200796	+	0	NA	5' UTR (NM_025869, exon 1 of 5)	5' UTR (NM_025869, exon 1 of 5)	232	NM_025869	66959	Mm.23916	NM_025869	ENSMUSG00000039661	Dusp26	2310043K02Rik|Skrp3	dual specificity phosphatase 26 (putative)	protein-coding
unique_peak1-3605-8-2-1.42025991722641-1.65811743852845	chr19	32315332	32315875	+	0	NA	intron (NM_144792, intron 4 of 9)	MIRc|SINE|MIR	-30100	NM_001168526	208449	Mm.329810	NM_144792	ENSMUSG00000040451	Sgms1	9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23	sphingomyelin synthase 1	protein-coding
common_peak2-22836-15-35--1.15776025088666-1.87578206828671	chr14	20707305	20708239	+	0	NA	intron (NM_001285908, intron 3 of 3)	intron (NM_001285908, intron 3 of 3)	49625	NR_105025	52512	Mm.483998	NR_105025		D14Ertd670e	-	DNA segment, Chr 14, ERATO Doi 670, expressed	ncRNA
common_peak1-12214-11-3-1.50869358425161-1.95434855131066	chr17	34118491	34119221	+	0	NA	non-coding (NR_033305, exon 1 of 1)	non-coding (NR_033305, exon 1 of 1)	419	NR_033305	433100	Mm.380381	NM_001013793		AA388235	-	expressed sequence AA388235	ncRNA
common_peak2-19857-14-7-0.899216160357645-0.947446088118041	chr1	91816786	91817273	+	0	NA	Intergenic	Intergenic	10722	NM_010262	14472	Mm.204730	NM_010262		Gbx2	D130058E05Rik|Gbx-2|MMoxA|Stra7	gastrulation brain homeobox 2	protein-coding
common_peak1-13078-19-8-1.23276232521937-1.61268301619756	chr19	6868885	6869668	+	0	NA	Intergenic	Intergenic	35158	NR_039555	100628576		NR_039555		Mir5046	mmu-mir-5046|mu-mir-5046	microRNA 5046	ncRNA
common_peak1-14968-17-40--1.13925566641305-1.9602491241746	chr3	105687517	105688317	+	0	NA	intron (NM_027025, intron 1 of 6)	Lx3C|LINE|L1	14141	NM_001174169	11542	Mm.235024	NM_009631	ENSMUSG00000000562	Adora3	1700001D09Rik|4930578J19Rik|A3AR|A3R|AA3R|ARA3|Gpcr2	adenosine A3 receptor	protein-coding
unique_peak1-4865-10-4-1.03448725012141-1.5150158574804	chr4	8200173	8200639	+	0	NA	Intergenic	RMER21B|LTR|ERV1	-34218	NM_007592	12319	Mm.119320	NM_007592		Car8	AW546993|Ca8|Cals|Cals1|Carp|wdl	carbonic anhydrase 8	protein-coding
common_peak1-16458-62-66-0.344662268344313-0.821548731134755	chr5	136052861	136055427	+	0	NA	Intergenic	ORR1E|LTR|MaLR	-5231	NM_019577	56221	Mm.31505	NM_019577	ENSMUSG00000004814	Ccl24	CKb-6|MPIF-2|Scya24	chemokine (C-C motif) ligand 24	protein-coding
common_peak2-31719-17-37--1.02963117523855-1.57996244908225	chr9	4309818	4310520	+	0	NA	promoter-TSS (NM_026276)	promoter-TSS (NM_026276)	353	NM_026962	69149	Mm.25946	NM_026962	ENSMUSG00000025893	Kbtbd3	2200003A07Rik|Bklhd3	kelch repeat and BTB (POZ) domain containing 3	protein-coding
unique_peak1-6336-14-9-0.577288065470282-0.630231561310125	chr7	48917927	48918795	+	0	NA	Intergenic	L1VL4|LINE|L1	-5023	NR_004441	75835	Mm.159597	NM_029460	ENSMUSG00000074164	Vmn2r-ps54	1700108E19Rik|4930562N12Rik|Casr-rs5|ENSMUSG00000078527|Gm10948|Gprc2a-rs5	vomeronasal 2, receptor, pseudogene 54	pseudo
unique_peak2-36744-1-6--2.43441193227435-1.56314192529759	chr3	58609361	58609755	+	0	NA	Intergenic	RSINE1|SINE|B4	79576	NM_153386	229320	Mm.131502	NM_153384	ENSMUSG00000043850	Clrn1	A130002D11Rik|USH3|Ush3a	clarin 1	protein-coding
common_peak1-10660-22-12-0.946844386946312-1.31435121412491	chr14	48295286	48296204	+	0	NA	intron (NM_001293635, intron 6 of 40)	intron (NM_001293635, intron 6 of 40)	12314	NM_008477	16709	Mm.3110	NM_008477	ENSMUSG00000021843	Ktn1	-	kinectin 1	protein-coding
common_peak1-17161-49-45-0.482721866968171-1.0238927023692	chr6	119387662	119389043	+	0	NA	intron (NM_009525, intron 4 of 4)	intron (NM_009525, intron 4 of 4)	11052	NM_001271757	22419	Mm.321818	NM_009525	ENSMUSG00000030170	Wnt5b	AW545702|Wnt-5b	wingless-type MMTV integration site family, member 5B	protein-coding
unique_peak2-35742-11-18--0.739233929191972-0.671582559449692	chr18	36793801	36794514	+	0	NA	intron (NM_175375, intron 19 of 33)	intron (NM_175375, intron 19 of 33)	-29557	NM_201256	108112	Mm.24790	NM_201256		Eif4ebp3	4e-bp3	eukaryotic translation initiation factor 4E binding protein 3	protein-coding
unique_peak2-35736-4-7--1.02346051385325-1.09384600808989	chr18	36314258	36314604	+	0	NA	intron (NM_001167891, intron 1 of 9)	intron (NM_001167891, intron 1 of 9)	42383	NM_001167891	100042150	Mm.380390	NM_001167891	ENSMUSG00000060275	Nrg2	Don1|NTAK	neuregulin 2	protein-coding
common_peak2-26396-111-163-0.0601417867920846-0.342643027274497	chr2	57123205	57124263	+	0	NA	intron (NM_010274, intron 2 of 16)	RMER6A|LTR|ERVK	32941	NM_010274	14571	Mm.3711	NM_010274	ENSMUSG00000026827	Gpd2	AA408484|AI448216|AU021455|AW494132|GPDH|Gdm1|Gpd-m|Gpdh-m|TISP38	glycerol phosphate dehydrogenase 2, mitochondrial	protein-coding
common_peak1-15626-43-49-0.138706995748978-0.376238101225474	chr4	133625259	133626722	+	0	NA	intron (NM_001162970, intron 1 of 19)	intron (NM_001162970, intron 1 of 19)	1623	NM_001162970	230806	Mm.240080	NM_001162970	ENSMUSG00000012123	Aim1l	-	absent in melanoma 1-like	protein-coding
common_peak1-13499-55-41-0.812302448373941-2.38651324195789	chr2	59669799	59671384	+	0	NA	intron (NM_001290659, intron 18 of 25)	B3A|SINE|B2	50072	NM_001159636	72137	Mm.288734	NM_028118	ENSMUSG00000026988	Wdsub1	1700048E19Rik|2610014F08Rik	WD repeat, SAM and U-box domain containing 1	protein-coding
common_peak1-18927-37-38-0.24059085262357-0.466726531031556	chr9	45054606	45055805	+	0	NA	intron (NM_001198971, intron 4 of 4)	intron (NM_001198971, intron 4 of 4)	19585	NR_106054	102466803		NR_106054		Mir7086	mmu-mir-7086	microRNA mir-7086	ncRNA
common_peak1-12849-25-54--0.919509808179554-1.96184293807029	chr18	74215906	74216927	+	0	NA	intron (NM_172632, intron 1 of 5)	PB1D10|SINE|Alu	8187	NM_172632	225724	Mm.254517	NM_172632	ENSMUSG00000024558	Mapk4	A330097D03Rik|Erk3|Prkm4|p63Mapk	mitogen-activated protein kinase 4	protein-coding
common_peak1-12734-36-15-1.47932108616775-3.70968671820992	chr18	54907090	54908380	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	136337	NR_045400	328957	Mm.402781	NR_045400		9330117O12Rik	9330117O12	RIKEN cDNA 9330117O12 gene	ncRNA
common_peak1-15082-17-48--1.39641350591017-3.1189257363273	chr3	127789466	127790311	+	0	NA	Intergenic	Intergenic	144635	NR_045704	402774	Mm.209170	NR_045704		D030025E07Rik	-	RIKEN cDNA D030025E07 gene	ncRNA
common_peak1-15525-43-45-0.25900122946669-0.518540604135974	chr4	117914836	117915598	+	0	NA	intron (NM_011213, intron 7 of 32)	intron (NM_011213, intron 7 of 32)	-32048	NR_106085	102466820		NR_106085		Mir7226	mmu-mir-7226	microRNA mir-7226	ncRNA
unique_peak1-6540-9-6-0.382258484346616-1.11707584880836	chr7	126798452	126798937	+	0	NA	intron (NM_054094, intron 8 of 13)	intron (NM_054094, intron 8 of 13)	-34846	NM_178414	233801	Mm.240412	NM_178414	ENSMUSG00000047026	Acsm4	O-MACS|OMACS	acyl-CoA synthetase medium-chain family member 4	protein-coding
unique_peak2-39914-7-13--1.00826409175941-0.697979855752659	chrX	100625403	100625942	+	0	NA	Intergenic	Intergenic	-1184	NR_002844	22097	Mm.472939	NR_002844	ENSMUSG00000085715	Tsix	-	X (inactive)-specific transcript, opposite strand	ncRNA
unique_peak2-33458-0-7--3.84013093047421-1.80617997398389	chr11	66980839	66981189	+	0	NA	Intergenic	AT_rich|Low_complexity|Low_complexity	-3515	NM_001039545	17882	Mm.422801	NM_144961	ENSMUSG00000033196	Myh2	MHC2A|MyHC-IIa|Myh2a|Myhs-f|Myhs-f1|Myhsf1	myosin, heavy polypeptide 2, skeletal muscle, adult	protein-coding
unique_peak1-1200-19-4-2.08075923177432-3.05312482518673	chr11	103393497	103394656	+	0	NA	Intergenic	Lx5|LINE|L1	81977	NM_001033434	380730	Mm.380214	NM_001033434	ENSMUSG00000034239	Gm884	LRRC37	predicted gene 884	protein-coding
unique_peak1-2538-10-0-3.35641534500877-3.31132995230379	chr16	21865381	21865872	+	0	NA	Intergenic	Intergenic	-26416	NM_172821	71751	Mm.420837	NM_172821	ENSMUSG00000033618	Map3k13	C130026N12Rik|LZK	mitogen-activated protein kinase kinase kinase 13	protein-coding
common_peak2-26503-26-26-0.173011589994994-0.363124929330838	chr2	85036966	85037798	+	0	NA	promoter-TSS (NM_001033346)	promoter-TSS (NM_001033346)	-526	NM_001033346	241528	Mm.291095	NM_001033346	ENSMUSG00000075224	Lrrc55	A330097E02Rik|Gm351	leucine rich repeat containing 55	protein-coding
unique_peak1-92-20-4-2.16614668970383-3.28004177908661	chr1	43820571	43821383	+	0	NA	intron (NM_026430, intron 10 of 14)	L2a|LINE|L2	33530	NM_024283	78896	Mm.50109	NM_024283	ENSMUSG00000026051	1500015O10Rik	Ecrg4	RIKEN cDNA 1500015O10 gene	protein-coding
common_peak2-28616-15-32--1.0322293688028-1.48160942223867	chr5	24685830	24686577	+	0	NA	Intergenic	ID_B1|SINE|B4	-1095	NM_026449	67909	Mm.141471	NM_026449	ENSMUSG00000028938	Galntl5	1700021B12Rik|Galnt15	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5	protein-coding
common_peak1-14445-23-31--0.278232495490919-0.396392531282608	chr2	181601172	181602181	+	0	NA	intron (NM_025901, intron 2 of 2)	intron (NM_025901, intron 2 of 2)	2611	NM_025901	67005	Mm.271986	NM_025901	ENSMUSG00000038628	Polr3k	12.3kDa|1500004O14Rik|AI196849|AU014893|C11|RPC10|RPC11	polymerase (RNA) III (DNA directed) polypeptide K	protein-coding
common_peak2-25062-18-31--0.687080848771648-0.820293215674341	chr18	34624143	34624792	+	0	NA	intron (NM_146084, intron 9 of 20)	intron (NM_146084, intron 9 of 20)	42010	NM_146084	225358	Mm.226899	NM_146084	ENSMUSG00000036501	Fam13b	2610024E20Rik|AW060714|AW546153	family with sequence similarity 13, member B	protein-coding
common_peak1-18737-9-7-0.18961340640422-1.05908390183068	chr8	123982453	123983004	+	0	NA	Intergenic	Intergenic	83126	NM_029597	76405	Mm.165697	NM_029597	ENSMUSG00000031809	1700018B08Rik	1700084O22Rik	RIKEN cDNA 1700018B08 gene	protein-coding
common_peak2-28967-16-12-0.417823924126969-0.489164546851866	chr5	103772901	103773520	+	0	NA	Intergenic	Intergenic	-45162	NR_040699	74624	Mm.389662	NR_040699		4930429D17Rik	-	RIKEN cDNA 4930429D17 gene	ncRNA
common_peak1-8078-181-243-0.336641608636734-1.96997180571054	chr1	178405401	178407095	+	0	NA	Intergenic	B4A|SINE|B4	-200805	NM_176916	319455	Mm.338001	NM_176916	ENSMUSG00000055214	Pld5	B230365F16Rik	phospholipase D family, member 5	protein-coding
common_peak2-30812-29-39--0.209638014272252-0.348003640999435	chr7	128238026	128238451	+	0	NA	intron (NM_139310, intron 6 of 28)	intron (NM_139310, intron 6 of 28)	11286	NM_139310	246190	Mm.221073	NM_139310	ENSMUSG00000034990	Otoa	-	otoancorin	protein-coding
common_peak2-22432-8-17--1.16470258349474-1.02063122982878	chr13	38204884	38205407	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-38018	NM_023842	109620	Mm.355327	NM_023842	ENSMUSG00000054889	Dsp	2300002E22Rik|5730453H04Rik|AA407887|AA407888|AW109828|DP	desmoplakin	protein-coding
unique_peak1-5371-11-4-1.18676548936425-1.68134727924692	chr5	98948295	98948827	+	0	NA	intron (NM_001024614, intron 3 of 5)	intron (NM_001024614, intron 3 of 5)	-43878	NR_030484	735265		NR_030484		Mir703	Mirn703|mmu-mir-703	microRNA 703	ncRNA
common_peak1-17389-46-48-0.283286099133593-0.591158351830189	chr7	139280229	139281494	+	0	NA	intron (NM_018867, intron 4 of 13)	intron (NM_018867, intron 4 of 13)	65563	NM_018867	55987	Mm.471654	NM_018867	ENSMUSG00000030862	Cpxm2	4632435C11Rik|CPX-2|Cpx2	carboxypeptidase X 2 (M14 family)	protein-coding
common_peak2-29145-17-12-0.517856620063946-0.647240723060192	chr5	126537416	126537981	+	0	NA	Intergenic	AT_rich|Low_complexity|Low_complexity	524910	NM_001190352	208151	Mm.40397	NM_001190352	ENSMUSG00000070498	Tmem132b	AK220418|mKIAA1786	transmembrane protein 132B	protein-coding
common_peak1-15852-17-34--0.910986678739929-1.23560027455358	chr5	3343938	3344748	+	0	NA	promoter-TSS (NM_009873)	promoter-TSS (NM_009873)	31	NM_009873	12571	Mm.31672	NM_009873	ENSMUSG00000040274	Cdk6	5830411I20|AI504062|Crk2	cyclin-dependent kinase 6	protein-coding
common_peak1-14797-19-26--0.352200175501782-0.416752705545949	chr3	89998257	89999165	+	0	NA	intron (NM_029937, intron 32 of 39)	intron (NM_029937, intron 32 of 39)	18858	NM_001190258	100043813	Mm.270283	NM_001190258	ENSMUSG00000050621	Rps27rt	ENSMUSG00000050621|Gm9846|Rps27l2	ribosomal protein S27, retrogene	protein-coding
unique_peak1-1566-7-0-2.79909083029819-2.40823996531185	chr13	30154620	30155089	+	0	NA	Intergenic	Intergenic	-73505	NM_153546	218121	Mm.89682	NM_153546	ENSMUSG00000038732	Mboat1	9130215M02Rik|BC023845|LPEAT1|Moact1|Oact1	membrane bound O-acyltransferase domain containing 1	protein-coding
unique_peak2-37131-5-32--2.74877445536431-5.07532537266956	chr4	15241078	15241988	+	0	NA	Intergenic	Intergenic	48566	NM_181401	100201	Mm.394111	NM_181401	ENSMUSG00000043252	Tmem64	9630015D15Rik|AI790744|AV300874	transmembrane protein 64	protein-coding
common_peak1-7753-19-8-1.23276232521937-1.61268301619756	chr1	91043572	91044328	+	0	NA	intron (NM_133816, intron 4 of 5)	intron (NM_133816, intron 4 of 5)	46177	NR_106129	102465771		NR_106129		Mir7669	mmu-mir-7669	microRNA mir-7669	ncRNA
common_peak2-23620-46-69--0.231287073696165-0.437489091603667	chr15	82353594	82355289	+	0	NA	Intergenic	RLTR10-int|LTR|ERVK	-31087	NM_201360	380997	Mm.482248	NM_201360	ENSMUSG00000096852	Cyp2d12	9030605E09Rik	cytochrome P450, family 2, subfamily d, polypeptide 12	protein-coding
unique_peak1-1487-31-7-2.22523867081312-5.17358211006552	chr12	118657097	118658033	+	0	NA	Intergenic	Intergenic	-82080	NR_044987	432713	Mm.459210	NR_044987		Gm5441	-	predicted gene 5441	ncRNA
common_peak1-16817-29-52--0.615630373948088-1.02702006187975	chr6	47920357	47921271	+	0	NA	Intergenic	Intergenic	17425	NM_178898	101197	Mm.241063	NM_178898	ENSMUSG00000045466	Zfp956	AI894139	zinc finger protein 956	protein-coding
unique_peak1-4374-9-0-3.18961340640422-3.01029995663981	chr2	157770235	157770710	+	0	NA	TTS (NM_198627)	TTS (NM_198627)	30083	NM_198627	277432	Mm.441156	NM_198627	ENSMUSG00000037843	Vstm2l	Gm691	V-set and transmembrane domain containing 2-like	protein-coding
unique_peak1-16-16-5-1.53330114154691-1.80287260729378	chr1	163561399	163562316	+	0	NA	Intergenic	RMER10A|LTR|ERVL	137069	NM_183391	240873	Mm.276823	NM_183391	ENSMUSG00000066755	Tnfsf18	Gitrl	tumor necrosis factor (ligand) superfamily, member 18	protein-coding
unique_peak2-39480-5-10--1.16381195464315-1.33892459842472	chr9	57910981	57911452	+	0	NA	intron (NM_001166282, intron 10 of 19)	intron (NM_001166282, intron 10 of 19)	31135	NM_001243265	330951	Mm.406992	NM_001243265		Gm16130	E330033L03|OTTMUSG00000030814	predicted gene 16130	protein-coding
common_peak1-14912-33-76--0.935448978169372-2.76761540882188	chr3	98013346	98014491	+	0	NA	Intergenic	RMER10A|LTR|ERVL	-12161	NM_026328	67709	Mm.46306	NM_026328	ENSMUSG00000027876	Reg4	2010002L15Rik|GISP|RELP	regenerating islet-derived family, member 4	protein-coding
unique_peak2-37423-2-7--1.91745425626332-1.45399745587252	chr4	149526456	149526854	+	0	NA	intron (NM_001085529, intron 3 of 11)	intron (NM_001085529, intron 3 of 11)	3574	NM_001085529	435818	Mm.359648	NM_001085529	ENSMUSG00000062064	Slc2a7	OTTMUSG00000010396	solute carrier family 2 (facilitated glucose transporter), member 7	protein-coding
common_peak2-32360-32-66--0.786997171238112-1.82572255783529	chrX	96095819	96097967	+	0	NA	Intergenic	Lx3A|LINE|L1	-10569	NM_052976	94190	Mm.254336	NM_052976		Ophn1	C130037N19Rik	oligophrenin 1	protein-coding
common_peak2-21517-14-12-0.198776442216552-0.373562084705529	chr11	94364160	94364939	+	0	NA	exon (NM_170671, exon 18 of 19)	exon (NM_170671, exon 18 of 19)	-3261	NM_027984	71889	Mm.248620	NM_027984	ENSMUSG00000010080	Epn3	2310022G12Rik	epsin 3	protein-coding
common_peak2-26208-18-13-0.505564229170747-0.625923329873571	chr2	26236814	26237352	+	0	NA	promoter-TSS (NM_172339)	promoter-TSS (NM_172339)	-910	NM_001290419	227644	Mm.207460	NM_172339	ENSMUSG00000036281	Snapc4	5730436L13Rik	small nuclear RNA activating complex, polypeptide 4	protein-coding
unique_peak1-6459-22-10-1.18785248645011-1.74319850844462	chr7	101316918	101318083	+	0	NA	Intergenic	Intergenic	1089111	NM_021427	58238	Mm.113787	NM_021427		Fam181b	A830059I20Rik|AB041569	family with sequence similarity 181, member B	protein-coding
common_peak2-26349-3-10--1.87341470859657-1.75805390616669	chr2	36136958	36137243	+	0	NA	Intergenic	Intergenic	51154	NM_008969	19224	Mm.275434	NM_008969	ENSMUSG00000047250	Ptgs1	COX1|Cox-1|Cox-3|PGHS-1|PHS 1|Pghs1	prostaglandin-endoperoxide synthase 1	protein-coding
common_peak1-13277-25-23-0.27688740462395-0.451698068655807	chr19	37550169	37551047	+	0	NA	Intergenic	MTA_Mm-int|LTR|MaLR	41277	NM_008245	15242	Mm.33896	NM_008245		Hhex	Hex|Hex1|Hhex-rs2|Prh|Prhx	hematopoietically expressed homeobox	protein-coding
unique_peak2-39106-7-7--0.200909169701811-0.97990265578305	chr8	79550562	79550894	+	0	NA	intron (NM_001083906, intron 2 of 8)	intron (NM_001083906, intron 2 of 8)	124321	NM_001083906	110784	Mm.324393	NM_001083906	ENSMUSG00000031618	Nr3c2	MR|Mlr	nuclear receptor subfamily 3, group C, member 2	protein-coding
unique_peak1-459-11-6-0.701338662194009-1.32595962126035	chr1	170829415	170829906	+	0	NA	Intergenic	Intergenic	408886	NR_105766	102465178		NR_105766	miRBase:MI0021876	Mir6348	mmu-mir-6348	microRNA mir-6348	ncRNA
common_peak2-22655-57-78--0.0377477080981743-0.302430955324439	chr13	94976086	94976859	+	0	NA	intron (NM_029153, intron 8 of 8)	intron (NM_029153, intron 8 of 8)	78764	NM_029153	107767	Mm.201455	NM_029153	ENSMUSG00000021687	Scamp1	4930505M11Rik|AI415563|AW122395	secretory carrier membrane protein 1	protein-coding
common_peak1-18389-49-76--0.260502717669717-0.524655741976941	chr8	71366641	71367900	+	0	NA	Intergenic	RLTR20B2|LTR|ERVK	-37184	NM_008509	16956	Mm.1514	NM_008509	ENSMUSG00000015568	Lpl	-	lipoprotein lipase	protein-coding
unique_peak1-6458-14-3-1.89921616035764-2.80787975886178	chr7	101041463	101042261	+	0	NA	Intergenic	(CATA)n|Simple_repeat|Simple_repeat	813473	NM_021427	58238	Mm.113787	NM_021427		Fam181b	A830059I20Rik|AB041569	family with sequence similarity 181, member B	protein-coding
common_peak2-21351-27-38--0.293856267967013-0.412842868820461	chr11	77783543	77784653	+	0	NA	intron (NM_001291225, intron 5 of 15)	intron (NM_001291225, intron 5 of 15)	-12220	NM_174852	268448	Mm.274329	NM_174852	ENSMUSG00000037791	Phf12	2410142K10Rik|F630045O13|PF1|mKIAA1523	PHD finger protein 12	protein-coding
common_peak1-13581-11-24--1.13516260552311-1.3750876294627	chr2	13544417	13545044	+	0	NA	Intergenic	L1_Mus3|LINE|L1	48792	NM_011701	22352	Mm.268000	NM_011701	ENSMUSG00000026728	Vim	-	vimentin	protein-coding
common_peak1-18655-30-36--0.039777956137077-0.301029995663973	chr8	111940081	111941459	+	0	NA	Intergenic	Intergenic	-75962	NR_002928	384864	Mm.390083	NR_002928		Gm1943	-	WD repeat domain 70 pseudogene	pseudo
common_peak1-9060-62-69-0.281468441857118-0.662654265687252	chr11	68901157	68902412	+	0	NA	promoter-TSS (NM_009497)	promoter-TSS (NM_009497)	-246	NM_009497	22318	Mm.28643	NM_009497	ENSMUSG00000020894	Vamp2	Syb-2|Syb2|sybII	vesicle-associated membrane protein 2	protein-coding
common_peak1-15596-18-10-0.853487532591054-1.03889213727317	chr4	129912971	129913616	+	0	NA	Intergenic	B4A|SINE|B4	-13754	NM_001034872	332942	Mm.387701	NM_001034872	ENSMUSG00000023120	Gm853	OTTMUSG00000009560	predicted gene 853	protein-coding
unique_peak2-33550-7-11--0.785871670422967-1.21681515183528	chr11	79790540	79790990	+	0	NA	Intergenic	LTRIS2|LTR|ERV1	-14876	NM_144826	216987	Mm.274961	NM_144826	ENSMUSG00000035575	Utp6	4732497O03Rik|HCA66	UTP6, small subunit (SSU) processome component, homolog (yeast)	protein-coding
unique_peak1-1504-13-6-0.971117108580164-1.01572999746118	chr13	3680709	3681380	+	0	NA	Intergenic	Intergenic	47766	NM_001267724	142688	Mm.253061	NM_178283	ENSMUSG00000033781	Asb13	2210015B19Rik|6430573K02Rik|Asb-13|C85285	ankyrin repeat and SOCS box-containing 13	protein-coding
common_peak2-26855-31-32-0.18084455145467-0.379775532323848	chr2	155133404	155134268	+	0	NA	intron (NM_001004721, intron 7 of 11)	intron (NM_001004721, intron 7 of 11)	31736	NR_046364	66734	Mm.196239	NM_025735	ENSMUSG00000027602	Map1lc3a	1010001H21Rik|4922501H04Rik|LC3|LC3a	microtubule-associated protein 1 light chain 3 alpha	protein-coding
unique_peak1-443-15-2-2.4272022498345-3.53487848679804	chr1	166009242	166009815	+	0	NA	intron (NM_011346, intron 8 of 8)	intron (NM_011346, intron 8 of 8)	17321	NM_001164059	20343	Mm.1461	NM_011346	ENSMUSG00000026581	Sell	AI528707|CD62L|L-selectin|LECAM-1|Lnhr|Ly-22|Ly-m22|Lyam-1|Lyam1	selectin, lymphocyte	protein-coding
common_peak1-19093-25-15-0.861849905345106-1.28534286439186	chr9	71692845	71693780	+	0	NA	3' UTR (NM_001253864, exon 13 of 13)	3' UTR (NM_001253864, exon 13 of 13)	50591	NM_001253864	21406	Mm.171615	NM_011544	ENSMUSG00000032228	Tcf12	A130037E08Rik|ALF1|HEB|HEBAlt|HTF-4|HTF4|ME1|REB|bHLHb20	transcription factor 12	protein-coding
unique_peak1-2705-8-1-2.00522241794757-2.05605744720049	chr16	91394740	91395187	+	0	NA	TTS (NM_001110498)	TTS (NM_001110498)	-11517	NM_008349	16155	Mm.4154	NM_008349	ENSMUSG00000022969	Il10rb	6620401D04Rik|AI528744|CRF2-4|Crfb4|D16H21S58|D21S58h|IL-10R2|Il10r2	interleukin 10 receptor, beta	protein-coding
common_peak2-28152-10-12--0.344024373132323-0.340565874754526	chr4	103263598	103264157	+	0	NA	Intergenic	L1Md_T|LINE|L1	208772	NR_040673	622167	Mm.244115	NR_040673	ENSMUSG00000086136	Gm12718	OTTMUSG00000008109	predicted gene 12718	ncRNA
common_peak1-19059-32-26-0.524204517056192-0.869438253311882	chr9	67047863	67049206	+	0	NA	Intergenic	MERVL-int|LTR|ERVL	35999	NR_029576	387185		NR_029576		Mir190a	Mir190|Mirn190|mir-190|mmu-mir-190|mmu-mir-190a	microRNA 190a	ncRNA
common_peak2-29342-18-38--0.972483067633897-1.53432270224293	chr5	148994221	148995992	+	0	NA	intron (NM_029920, intron 4 of 14)	intron (NM_029920, intron 4 of 14)	216374	NM_007513	11987	Mm.275489	NM_007513	ENSMUSG00000041313	Slc7a1	4831426K01Rik|AI447493|Atrc-1|Atrc1|Cat1|Rec-1|Rev-1|mCAT-1	solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	protein-coding
common_peak2-31138-35-91--1.09219169759451-4.11891672489498	chr8	34964594	34965920	+	0	NA	intron (NM_001042674, intron 4 of 7)	intron (NM_001042674, intron 4 of 7)	75078	NM_019733	19663	Mm.323997	NM_019733	ENSMUSG00000031586	Rbpms	2010300K22Rik|2700019M19Rik|AU017537|RBP-MS|hermes	RNA binding protein gene with multiple splicing	protein-coding
common_peak1-18971-42-38-0.456927109004935-0.908349182838243	chr9	55511458	55512855	+	0	NA	intron (NM_001081341, intron 25 of 32)	Lx9|LINE|L1	123200	NM_027397	104360	Mm.273996	NM_027397	ENSMUSG00000032318	Isl2	3110001N10Rik	insulin related protein 2 (islet 2)	protein-coding
unique_peak1-6239-11-3-1.50869358425161-1.95434855131066	chr7	17024834	17025439	+	0	NA	Intergenic	Intergenic	-12992	NM_026938	69094	Mm.29633	NM_026938	ENSMUSG00000019158	Tmem160	1810008O21Rik	transmembrane protein 160	protein-coding
common_peak1-17258-257-269-0.801264325284711-12.4279647644454	chr6	134566112	134567863	+	0	NA	intron (NM_026345, intron 3 of 3)	L2a|LINE|L2	15519	NM_026345	67729	Mm.57648	NM_026345	ENSMUSG00000032718	Mansc1	9130403P13Rik	MANSC domain containing 1	protein-coding
common_peak2-23082-5-5--0.289342836727009-0.909929411522249	chr14	75864099	75864463	+	0	NA	intron (NM_001128093, intron 1 of 1)	intron (NM_001128093, intron 1 of 1)	8492	NM_001128093	380918	Mm.484360	NM_001128093	ENSMUSG00000091722	Siah3	Gm912	seven in absentia homolog 3 (Drosophila)	protein-coding
common_peak1-19298-17-29--0.688594257403481-0.756750750680359	chr9	121297298	121297981	+	0	NA	intron (NM_175114, intron 1 of 15)	intron (NM_175114, intron 1 of 15)	21563	NM_175114	67095	Mm.491112	NM_175114	ENSMUSG00000032536	Trak1	2310001H13Rik|AI413908|AI467545|hyrt|mKIAA1042	trafficking protein, kinesin binding 1	protein-coding
common_peak2-19835-6-8--0.60452689106201-1.03789460276074	chr1	90602947	90603371	+	0	NA	Intergenic	Intergenic	-4393	NM_177305	320982	Mm.27968	NM_177305	ENSMUSG00000049866	Arl4c	A630084M22Rik|Arl7|LAK	ADP-ribosylation factor-like 4C	protein-coding
unique_peak1-4914-12-1-2.64877598508764-3.36932189928148	chr4	53449313	53449880	+	0	NA	Intergenic	ORR1A3|LTR|MaLR	-3689	NM_001159633	100434	Mm.482207	NM_133891	ENSMUSG00000028412	Slc44a1	2210409B22Rik|4833416H08Rik|AW547365|CHTL1|CTL1|Cdw92	solute carrier family 44, member 1	protein-coding
common_peak1-11285-56-51-0.535156107298151-1.29979449988492	chr15	83171316	83173445	+	0	NA	intron (NM_025445, intron 2 of 15)	intron (NM_025445, intron 2 of 15)	8297	NM_025445	66251	Mm.258910	NM_025445	ENSMUSG00000054277	Arfgap3	0610009H19Rik|1810004P07Rik|1810035F16Rik|9130416J18Rik|Arfgap1	ADP-ribosylation factor GTPase activating protein 3	protein-coding
unique_peak1-3340-12-0-3.64877598508764-4.21441993929574	chr18	88925828	88926408	+	0	NA	Intergenic	Intergenic	137481	NM_018821	54607	Mm.91920	NM_018821	ENSMUSG00000056153	Socs6	1500012M23Rik|5830401B18Rik|AI447482|Cis4|Cish4|HSPC060|SOCS-4|SOCS-6|SSI4|STAI4|STATI4|Socs4	suppressor of cytokine signaling 6	protein-coding
common_peak1-7877-9-19--1.13231468848314-1.09394599973099	chr1	134078573	134079102	+	0	NA	Intergenic	(TTTTG)n|Simple_repeat|Simple_repeat	-9176	NM_001033250	213409	Mm.426321	NM_001033250	ENSMUSG00000079330	Lemd1	4930540I23Rik|6430514M23Rik|AI428128|LEMP-1	LEM domain containing 1	protein-coding
common_peak2-25222-5-7--0.704380336005853-1.01466476204226	chr18	61632695	61633100	+	0	NA	intron (NR_045419, intron 3 of 3)	intron (NR_045419, intron 3 of 3)	11364	NR_045419	442846	Mm.417648	NR_045419		A530050N04Rik	-	RIKEN cDNA A530050N04 gene	ncRNA
common_peak1-9946-16-16-0.0308008010177225-0.307611222530525	chr12	110737861	110738618	+	0	NA	Intergenic	Intergenic	-40967	NR_027652	17263	Mm.289645	NM_144513	ENSMUSG00000021268	Meg3	2900016C05Rik|3110050O07Rik|6330408G06Rik|AI425946|AW108224|D12Bwg1266e|Gtl2|R74756|R75394	maternally expressed 3	ncRNA
common_peak2-30283-31-26-0.470351168649655-0.720235944639222	chr7	18857990	18858925	+	0	NA	Intergenic	RLTR1B|LTR|ERV1	27761	NM_153749	266815	Mm.106769	NM_153749	ENSMUSG00000054005	Mill1	5530400I18Rik	MHC I like leukocyte 1	protein-coding
unique_peak1-5275-10-4-1.03448725012141-1.5150158574804	chr5	65326425	65326949	+	0	NA	Intergenic	Intergenic	-1890	NM_001276445	21897	Mm.273024	NM_030682	ENSMUSG00000044827	Tlr1	-	toll-like receptor 1	protein-coding
common_peak1-10452-55-58-0.321976821790861-0.72320139087996	chr13	108043641	108045194	+	0	NA	Intergenic	Intergenic	-215485	NR_045083	105120	Mm.417700	NR_045083		AI197445	-	expressed sequence AI197445	ncRNA
unique_peak1-1461-8-3-1.00522241794757-1.39487600375387	chr12	110044436	110045009	+	0	NA	exon (NM_009537, exon 2 of 5)	exon (NM_009537, exon 2 of 5)	13201	NM_009537	22632	Mm.3868	NM_009537	ENSMUSG00000021264	Yy1	AW488674|NF-E1	YY1 transcription factor	protein-coding
unique_peak1-1443-15-3-2.01216475055566-3.03427613622886	chr12	100779182	100779876	+	0	NA	Intergenic	(TAAA)n|Simple_repeat|Simple_repeat	86655	NR_045288	73457	Mm.383439	NR_045288		1700064M15Rik	-	RIKEN cDNA 1700064M15 gene	ncRNA
unique_peak2-36527-4-9--1.34538860874061-1.36011389749466	chr2	163574768	163575103	+	0	NA	intron (NM_001272052, intron 1 of 11)	intron (NM_001272052, intron 1 of 11)	1040	NM_007398	11486	Mm.388	NM_007398	ENSMUSG00000017697	Ada	-	adenosine deaminase	protein-coding
unique_peak2-34108-4-14--1.93035110946177-2.23384849113406	chr13	17406763	17407366	+	0	NA	intron (NM_138654, intron 10 of 13)	Lx4B|LINE|L1	379535	NM_138654	192136	Mm.364180	NM_138654		Sugct	5033411D12Rik|D17907	succinyl-CoA glutarate-CoA transferase	protein-coding
common_peak1-12693-28-11-1.46799661910031-2.80071159219767	chr18	40185740	40186750	+	0	NA	Intergenic	Intergenic	192808	NM_023311	67180	Mm.270382	NM_023311	ENSMUSG00000024487	Yipf5	2610311I19Rik|AA408236|Yip1a	Yip1 domain family, member 5	protein-coding
common_peak2-26961-61-66-0.316660139291568-0.723126769145835	chr2	165857067	165858474	+	0	NA	intron (NM_008679, intron 1 of 22)	B1F|SINE|Alu	39633	NM_008679	17979	Mm.469663	NM_008679	ENSMUSG00000027678	Ncoa3	2010305B15Rik|AW321064|Actr|Aib1|KAT13B|Rac3|Src3|Tram-1|Tram1|bHLHe42|p/Cip|pCip	nuclear receptor coactivator 3	protein-coding
common_peak2-28115-19-19-0.0807592317743238-0.322753776620787	chr4	89051834	89052402	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-95177	NM_007670	12579	Mm.423094	NM_007670	ENSMUSG00000073802	Cdkn2b	AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b	cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)	protein-coding
unique_peak2-32674-6-8--0.60452689106201-1.03789460276074	chr1	135843751	135844279	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-26037	NM_054077	116847	Mm.214514	NM_054077	ENSMUSG00000041577	Prelp	7330409J17Rik|SLRR2A	proline arginine-rich end leucine-rich repeat	protein-coding
unique_peak1-2724-9-1-2.18961340640422-2.31132995230379	chr16	92680219	92680708	+	0	NA	intron (NM_001111022, intron 4 of 6)	intron (NM_001111022, intron 4 of 6)	17111	NM_001111023	12394	Mm.4081	NM_009821	ENSMUSG00000022952	Runx1	AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b	runt related transcription factor 1	protein-coding
common_peak1-17971-24-35--0.376715098674596-0.470271536760928	chr7	132575539	132576660	+	0	NA	Intergenic	ORR1B1-int|LTR|MaLR	-12035	NM_029842	77035	Mm.307239	NM_029842	ENSMUSG00000030752	Kdm8	3110005O21Rik|Jmjd5	lysine (K)-specific demethylase 8	protein-coding
common_peak2-28668-69-124--0.370641837403355-1.01911373693729	chr5	31697000	31698703	+	0	NA	Intergenic	L1_Mur1|LINE|L1	-56958	NM_172993	269639	Mm.259127	NM_172993	ENSMUSG00000062761	Zfp512	2500002M11Rik|AI450173|D230008H22|Znf512	zinc finger protein 512	protein-coding
common_peak1-12072-111-193--0.182219050776959-0.589940284655538	chr17	24168741	24170055	+	0	NA	Intergenic	Intergenic	-5812	NM_175440	213171	Mm.133083	NM_175440	ENSMUSG00000050762	Prss27	CAPH2|Mpn|marapsin	protease, serine 27	protein-coding
common_peak1-17522-53-64-0.118605199387474-0.379881757498728	chr7	28338340	28339515	+	0	NA	promoter-TSS (NM_011116)	promoter-TSS (NM_011116)	618	NM_175107	66367	Mm.29831	NM_175107	ENSMUSG00000049643	2310022A10Rik	-	RIKEN cDNA 2310022A10 gene	protein-coding
common_peak1-17999-23-18-0.473839991065495-0.618644178587689	chr7	139364474	139365241	+	0	NA	Intergenic	Intergenic	-18433	NM_018867	55987	Mm.471654	NM_018867	ENSMUSG00000030862	Cpxm2	4632435C11Rik|CPX-2|Cpx2	carboxypeptidase X 2 (M14 family)	protein-coding
common_peak2-28921-11-16--0.578769256998726-0.503257505534083	chr5	92774240	92774730	+	0	NA	intron (NM_181728, intron 2 of 9)	intron (NM_181728, intron 2 of 9)	3430	NM_021274	15945	Mm.877	NM_021274	ENSMUSG00000034855	Cxcl10	C7|CRG-2|INP10|IP-10|IP10|Ifi10|Scyb10|gIP-10|mob-1	chemokine (C-X-C motif) ligand 10	protein-coding
common_peak1-12669-19-12-0.702247608520594-0.840839978588874	chr18	36706347	36707128	+	0	NA	intron (NM_001271547, intron 19 of 19)	intron (NM_001271547, intron 19 of 19)	-13520	NM_175375	108857	Mm.482287	NM_175375	ENSMUSG00000024483	Ankhd1	1110004O12Rik|4933432B13Rik|9130019P20Rik|A530027J04Rik|A630021B20Rik|AA571404|Mask|mFLJ00246|mKIAA1085	ankyrin repeat and KH domain containing 1	protein-coding
unique_peak2-38365-7-8--0.370834171144123-1.00793137938329	chr7	4995538	4995965	+	0	NA	Intergenic	(TCTCTG)n|Simple_repeat|Simple_repeat	-5703	NM_001039532	654801	Mm.333548	NM_001039532	ENSMUSG00000043290	Zfp784	C730049F21Rik|Znf784	zinc finger protein 784	protein-coding
common_peak1-17649-42-46-0.187740476189546-0.440152849854807	chr7	55961711	55962773	+	0	NA	Intergenic	RLTR20B2|LTR|ERVK	-63071	NM_207537	404238	Mm.377926	NM_207537	ENSMUSG00000070546	Mrgprb3	MrgB3	MAS-related GPR, member B3	protein-coding
unique_peak2-34498-5-9--1.02630843089322-1.21398586181642	chr14	46636510	46637019	+	0	NA	Intergenic	Intergenic	-66938	NR_002875	218963	Mm.282093	NR_002875		Gm1821	-	ubiquitin pseudogene	pseudo
unique_peak2-37940-8-9--0.316705676939792-1.03275496310833	chr5	147894295	147894768	+	0	NA	intron (NM_181730, intron 1 of 2)	B1_Mur2|SINE|Alu	5609	NM_009087	20018	Mm.317557	NM_009087	ENSMUSG00000029642	Polr1d	1110003G10Rik|AC19|RPA16|Rpo1-3	polymerase (RNA) I polypeptide D	protein-coding
common_peak1-14087-15-33--1.07529809069468-1.60877160026698	chr2	122348549	122349227	+	0	NA	intron (NM_001085518, intron 14 of 17)	intron (NM_001085518, intron 14 of 17)	38211	NM_001085518	381417	Mm.482295	NM_001085518	ENSMUSG00000079071	Gm14085	OTTMUSG00000015615	predicted gene 14085	protein-coding
common_peak1-17183-13-22--0.745089925419244-0.690311289528838	chr6	122869267	122870095	+	0	NA	Intergenic	Intergenic	-2185	NM_199311	269799	Mm.297275	NM_199311	ENSMUSG00000049037	Clec4a1	BC049354|Dcir4	C-type lectin domain family 4, member a1	protein-coding
common_peak1-18433-8-11--0.579740082773585-1.14218153353838	chr8	79207146	79207604	+	0	NA	Intergenic	Intergenic	216697	NR_028579	100039211	Mm.367571	NR_028579	ENSMUSG00000074235	Gm10649	ENSMUSG00000074235	predicted gene 10649	ncRNA
common_peak2-25980-11-10-0.0492619656143161-0.31137425193576	chr19	53800735	53801136	+	0	NA	intron (NM_001170847, intron 1 of 13)	intron (NM_001170847, intron 1 of 13)	49139	NM_001170847	73713	Mm.313695	NM_001170847	ENSMUSG00000043639	Rbm20	1110018J23Rik|2010003H22Rik|AI646761	RNA binding motif protein 20	protein-coding
unique_peak2-36575-4-10--1.48289213249054-1.5150158574804	chr2	173451639	173451998	+	0	NA	intron (NR_027957, intron 2 of 14)	intron (NR_027957, intron 2 of 14)	33222	NR_027957	100043911	Mm.260590	NM_001033179	ENSMUSG00000055897	Ppp4r1l-ps	1700007P14Rik|5830403E09Rik|C030010B13Rik|Ppp4r1l	protein phosphatase 4, regulatory subunit 1-like, pseudogene	pseudo
common_peak1-18429-11-11--0.0762689164695427-0.301029995663976	chr8	78818815	78819464	+	0	NA	Intergenic	Intergenic	604933	NR_028579	100039211	Mm.367571	NR_028579	ENSMUSG00000074235	Gm10649	ENSMUSG00000074235	predicted gene 10649	ncRNA
unique_peak1-5887-11-4-1.18676548936425-1.68134727924692	chr6	86668580	86669172	+	0	NA	intron (NM_011818, intron 4 of 13)	RMER1B|Other|Other	14496	NM_011818	23885	Mm.321452	NM_011818	ENSMUSG00000001157	Gmcl1	2810049L19Rik|Gcl|mglc-1	germ cell-less homolog 1 (Drosophila)	protein-coding
common_peak2-28611-24-27--0.0141450192898871-0.304978344874324	chr5	24451347	24452519	+	0	NA	intron (NM_145401, intron 4 of 15)	MLT1B|LTR|MaLR	-37606	NM_001170556	108099	Mm.33649	NM_145401	ENSMUSG00000028944	Prkag2	2410051C13Rik|AAKG|AAKG2|AI854673|H91620p|WPWS	protein kinase, AMP-activated, gamma 2 non-catalytic subunit	protein-coding
unique_peak2-32873-11-9-0.186765489364251-0.344532117358383	chr10	7780274	7780905	+	0	NA	Intergenic	Intergenic	-104668	NM_138667	68652	Mm.193041	NM_138667	ENSMUSG00000015755	Tab2	1110030N06Rik|A530078N03Rik|Map3k7ip2|mKIAA0733	TGF-beta activated kinase 1/MAP3K7 binding protein 2	protein-coding
unique_peak1-6432-16-12-0.417823924126969-0.489164546851866	chr7	97446377	97447348	+	0	NA	Intergenic	RLTR19|LTR|ERVK	-4003	NM_001289583	83671	Mm.26751	NM_031394	ENSMUSG00000030616	Sytl2	AI266830|Slp2|mKIAA1597	synaptotagmin-like 2	protein-coding
unique_peak1-753-11-2-1.92373108353046-2.32232533660526	chr10	116177214	116177708	+	0	NA	Intergenic	Intergenic	-11228	NR_045345	72286	Mm.396207	NR_045345		1700030O20Rik	-	RIKEN cDNA 1700030O20 gene	ncRNA
common_peak1-8440-15-52--1.71575570400754-4.65855722829497	chr10	78425610	78426341	+	0	NA	promoter-TSS (NM_147042)	promoter-TSS (NM_147042)	-79	NM_147042	259044	Mm.223425	NM_147042	ENSMUSG00000042774	Olfr1353	MOR139-2	olfactory receptor 1353	protein-coding
common_peak1-18904-32-33-0.191629177969321-0.409729630423047	chr9	40781820	40783289	+	0	NA	intron (NM_019465, intron 9 of 9)	intron (NM_019465, intron 9 of 9)	-10359	NM_001081121	70989	Mm.335087	NM_001081121	ENSMUSG00000032023	4931429I11Rik	BB239335|jhy	RIKEN cDNA 4931429I11 gene	protein-coding
common_peak2-26431-7-6--0.00826409175941478-0.97990265578305	chr2	65224275	65224638	+	0	NA	Intergenic	Intergenic	-21999	NR_105755	102466151		NR_105755	miRBase:MI0021865	Mir6337	mmu-mir-6337	microRNA mir-6337	ncRNA
common_peak1-11324-60-60-0.423554524057645-1.04415539603865	chr15	85645332	85647361	+	0	NA	exon (NM_011105, exon 1 of 1)	exon (NM_011105, exon 1 of 1)	-4219	NM_197998	72355	Mm.33706	NM_197998	ENSMUSG00000064284	Cdpf1	2210021J22Rik	cysteine rich, DPF motif domain containing 1	protein-coding
common_peak1-10766-8-11--0.579740082773585-1.14218153353838	chr14	70520306	70520747	+	0	NA	intron (NM_021328, intron 2 of 8)	intron (NM_021328, intron 2 of 8)	20574	NM_021328	57784	Mm.24186	NM_021328	ENSMUSG00000022089	Bin3	1700015F07Rik	bridging integrator 3	protein-coding
common_peak2-30512-19-20-0.0103699038829257-0.306326795069978	chr7	65482341	65483308	+	0	NA	Intergenic	RMER17C|LTR|ERVK	-430748	NM_009728	11982	Mm.135129	NM_009728	ENSMUSG00000025324	Atp10a	Atp10c|pfatp	ATPase, class V, type 10A	protein-coding
common_peak2-21845-170-188-0.596030075429062-4.73267512335279	chr11	120990235	120991708	+	0	NA	Intergenic	Intergenic	-10980	NM_027622	70956	Mm.158506	NM_027622	ENSMUSG00000039337	Tex19.2	4921530G04Rik|Tex19b	testis expressed gene 19.2	protein-coding
common_peak1-8059-51-42-0.648659070900475-1.55729322517715	chr1	173766422	173768546	+	0	NA	Intergenic	Lx3_Mus|LINE|L1	-2344	NM_001252472	12523	Mm.259115	NM_013489	ENSMUSG00000038147	Cd84	A130013D22Rik|CDw84|SLAMF5	CD84 antigen	protein-coding
common_peak1-9549-17-23--0.366666162516118-0.383878263347744	chr11	117076530	117077356	+	0	NA	intron (NM_001113486, intron 1 of 11)	B4A|SINE|B4	15968	NM_001113486	53860	Mm.38450	NM_017380	ENSMUSG00000059248	Sept9	MSF1|Msf|PNUTL4|Sint1	septin 9	protein-coding
common_peak1-16862-30-57--0.688305585635699-1.33966217785262	chr6	56714856	56715755	+	0	NA	Intergenic	Intergenic	32502	NM_145958	210973	Mm.57295	NM_145958	ENSMUSG00000059486	Kbtbd2	BC022962|Bklhd1|mKIAA1489	kelch repeat and BTB (POZ) domain containing 2	protein-coding
common_peak1-10100-8-9--0.316705676939792-1.03275496310833	chr13	25007761	25008230	+	0	NA	intron (NM_172532, intron 6 of 9)	intron (NM_172532, intron 6 of 9)	10526	NR_045182	73326	Mm.458692	NR_045182		4932702P03Rik	1700047I16Rik	RIKEN cDNA 4932702P03 gene	ncRNA
unique_peak1-2649-9-2-1.60465090568306-1.87199725847353	chr16	45985389	45985905	+	0	NA	intron (NM_001134480, intron 1 of 3)	(CAGAG)n|Simple_repeat|Simple_repeat	24879	NM_001134480	433022	Mm.380993	NM_001134480	ENSMUSG00000087141	Plcxd2	AW494639|EG433022	phosphatidylinositol-specific phospholipase C, X domain containing 2	protein-coding
unique_peak1-4797-11-4-1.18676548936425-1.68134727924692	chr3	132966280	132966789	+	0	NA	Intergenic	Intergenic	-6540	NM_001293641	74776	Mm.210305	NM_146141	ENSMUSG00000028013	Ppa2	1110013G13Rik|Sid6306	pyrophosphatase (inorganic) 2	protein-coding
unique_peak1-1679-7-2-1.21412832957703-1.45399745587252	chr13	72640543	72641069	+	0	NA	Intergenic	Intergenic	125206	NR_030701	328287	Mm.235072	NR_030701		Gm20554	D430050G20	predicted gene, 20554	ncRNA
common_peak1-10571-41-47-0.116186204127504-0.355888493228951	chr14	24245013	24246133	+	0	NA	intron (NM_010610, intron 18 of 28)	intron (NM_010610, intron 18 of 28)	-331780	NR_033550	791307	Mm.364384	NR_033550	ENSMUSG00000068680	Gm10248	ENSMUSG00000068680	predicted gene 10248	ncRNA
common_peak2-26615-25-44--0.630003190984569-0.975110594803311	chr2	117249596	117250528	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-81449	NM_011246	19419	Mm.42150	NM_011246	ENSMUSG00000027347	Rasgrp1	Rasgrp	RAS guanyl releasing protein 1	protein-coding
unique_peak2-39238-9-17--0.980311595038092-0.844317084070804	chr8	111731606	111732282	+	0	NA	Intergenic	Intergenic	132864	NR_002928	384864	Mm.390083	NR_002928		Gm1943	-	WD repeat domain 70 pseudogene	pseudo
unique_peak1-7366-13-0-3.77847203063777-4.51544993495972	chrX	43494454	43495245	+	0	NA	Intergenic	IAPEY3-int|LTR|ERVK	187239	NR_045440	75133	Mm.417818	NR_045440	ENSMUSG00000085157	4930515L19Rik	-	RIKEN cDNA 4930515L19 gene	ncRNA
unique_peak1-936-8-4-0.683294323060208-1.21878474469819	chr11	54003918	54004452	+	0	NA	intron (NR_045506, intron 2 of 2)	RLTR45|LTR|ERVK	22605	NR_045506	71056	Mm.56332	NR_045506	ENSMUSG00000086209	4933405E24Rik	-	RIKEN cDNA 4933405E24 gene	ncRNA
common_peak2-29093-12-16--0.4386868561627-0.368541233333383	chr5	122284411	122285171	+	0	NA	intron (NM_008507, intron 1 of 7)	intron (NM_008507, intron 1 of 7)	2019	NM_008507	16923	Mm.65493	NM_008507	ENSMUSG00000042594	Sh2b3	AI429800|Lnk	SH2B adaptor protein 3	protein-coding
common_peak2-29512-36-33-0.391858244917415-0.703513783457792	chr6	34610216	34611303	+	0	NA	Intergenic	Intergenic	-48685	NM_145575	109624	Mm.308134	NM_145575	ENSMUSG00000029761	Cald1	4833423D12Rik|AI195384|AV071549|AW536160|C920027I18Rik	caldesmon 1	protein-coding
unique_peak1-2356-9-1-2.18961340640422-2.31132995230379	chr15	86081806	86082314	+	0	NA	intron (NM_145476, intron 4 of 12)	intron (NM_145476, intron 4 of 12)	37171	NM_145476	223754	Mm.28904	NM_145476	ENSMUSG00000051864	Tbc1d22a	BC023106|D15Ertd781e	TBC1 domain family, member 22a	protein-coding
common_peak2-25749-31-29-0.318348075204605-0.512115693271959	chr19	29047316	29048244	+	0	NA	Intergenic	L1Md_F3|LINE|L1	-9136	NM_198651	381218	Mm.280653	NM_198651	ENSMUSG00000064202	4430402I18Rik	AW122618|Spata6l	RIKEN cDNA 4430402I18 gene	protein-coding
common_peak2-32258-9-10--0.269818212233077-1.05503135781948	chrX	8132509	8133176	+	0	NA	Intergenic	L1Md_A|LINE|L1	-7461	NM_001205108	668976	Mm.227643	NM_001205108	ENSMUSG00000079702	Ssxb6	-	synovial sarcoma, X member B, breakpoint 6	protein-coding
common_peak1-16548-15-16--0.075298090694683-0.301029995663976	chr5	144125969	144126584	+	0	NA	intron (NM_133355, intron 1 of 20)	intron (NM_133355, intron 1 of 20)	689	NM_133355	170935	Mm.197460	NM_133355	ENSMUSG00000010825	Grid2ip	-	glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein 1	protein-coding
common_peak2-32116-30-47--0.415287091229283-0.618527319161325	chr9	102625556	102626846	+	0	NA	intron (NM_019764, intron 3 of 9)	intron (NM_019764, intron 3 of 9)	6067	NM_019764	56332	Mm.21145	NM_019764	ENSMUSG00000032531	Amotl2	AW549739|C79691|Lccp|MASCOT|mKIAA0989	angiomotin-like 2	protein-coding
common_peak2-27810-47-64--0.0875263882619066-0.316666098280086	chr3	144570309	144571261	+	0	NA	Intergenic	L1VL4|LINE|L1	-11810	NM_001039222	622139	Mm.447150	NM_001039222	ENSMUSG00000074196	Gm6289	EG622139	predicted gene 6289	protein-coding
common_peak1-9216-11-7-0.508693584251613-1.21681515183528	chr11	83473503	83474030	+	0	NA	Intergenic	Intergenic	-2320	NM_013652	20303	Mm.244263	NM_013652	ENSMUSG00000018930	Ccl4	AT744.1|Act-2|MIP-1B|Mip1b|Scya4	chemokine (C-C motif) ligand 4	protein-coding
common_peak2-21260-10-7-0.356415345008769-1.12966497611638	chr11	69442542	69443164	+	0	NA	Intergenic	Intergenic	-3620	NM_011814	23879	Mm.41930	NM_011814	ENSMUSG00000018765	Fxr2	Fxr2h	fragile X mental retardation, autosomal homolog 2	protein-coding
unique_peak1-3471-14-3-1.89921616035764-2.80787975886178	chr19	10047044	10047886	+	0	NA	Intergenic	Intergenic	-7625	NR_073181	14319	Mm.1776	NM_010239	ENSMUSG00000024661	Fth1	FHC|Fth|HFt|MFH	ferritin heavy chain 1	protein-coding
common_peak1-19083-14-17--0.270708841084668-0.328191099940267	chr9	70834180	70834682	+	0	NA	Intergenic	Intergenic	-51816	NM_008280	15450	Mm.390187	NM_008280	ENSMUSG00000032207	Lipc	AI256194|HL|Hpl	lipase, hepatic	protein-coding
common_peak2-21002-10-13--0.450939577048835-0.386243247519795	chr11	23730464	23730863	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-59693	NM_009044	19696	Mm.4869	NM_009044	ENSMUSG00000020275	Rel	c-Rel	reticuloendotheliosis oncogene	protein-coding
common_peak2-30646-22-28--0.210696890040167-0.337923771396236	chr7	98656895	98657607	+	0	NA	intron (NM_011807, intron 2 of 22)	intron (NM_011807, intron 2 of 22)	417955	NM_011807	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
unique_peak1-4969-14-5-1.31425365963649-1.4372489031793	chr4	106863448	106864209	+	0	NA	intron (NM_029565, intron 4 of 7)	MER2B|DNA|MER2_type	12593	NM_029565	56374	Mm.291192	NM_029565	ENSMUSG00000028618	Tmem59	1110001M20Rik|3110046P06Rik|AI256529|D4Ertd20e|MTDCF1|ORF18	transmembrane protein 59	protein-coding
common_peak2-19745-12-18--0.599151528355947-0.476916024233333	chr1	74587257	74588103	+	0	NA	intron (NM_176972, intron 1 of 25)	intron (NM_176972, intron 1 of 25)	-1783	NM_001081456	18802	Mm.290731	NM_148937	ENSMUSG00000026173	Plcd4	4921507K24Rik	phospholipase C, delta 4	protein-coding
common_peak1-14387-9-9--0.132314688483142-1.03275496310833	chr2	169633661	169634165	+	0	NA	intron (NM_080455, intron 1 of 1)	intron (NM_080455, intron 1 of 1)	174767	NM_080455	228911	Mm.315789	NM_080455	ENSMUSG00000047907	Tshz2	2900073F20Rik|B830045G17|Mtsh2|Sdccag33l|Tsh2|Zfp218|mKIAA4248|teashirt2	teashirt zinc finger family member 2	protein-coding
unique_peak1-4400-11-8-0.338768582809301-1.14218153353838	chr2	165887290	165887873	+	0	NA	intron (NM_008679, intron 17 of 22)	RLTR24|LTR|ERV1	69444	NM_008679	17979	Mm.469663	NM_008679	ENSMUSG00000027678	Ncoa3	2010305B15Rik|AW321064|Actr|Aib1|KAT13B|Rac3|Src3|Tram-1|Tram1|bHLHe42|p/Cip|pCip	nuclear receptor coactivator 3	protein-coding
unique_peak2-35767-8-19--1.31670567693979-1.30305656033811	chr18	43392691	43393443	+	0	NA	intron (NM_178749, intron 2 of 12)	intron (NM_178749, intron 2 of 12)	25716	NM_178749	269019	Mm.150401	NM_178749	ENSMUSG00000039954	Stk32a	A930015B13Rik|YANK1	serine/threonine kinase 32A	protein-coding
unique_peak2-37117-12-30--1.30542032529924-1.80107744087172	chr4	8690292	8691249	+	0	NA	intron (NM_001277149, intron 2 of 37)	B1_Mus1|SINE|Alu	73217	NM_001277149	320790	Mm.138792	NM_001033395	ENSMUSG00000041235	Chd7	A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis	chromodomain helicase DNA binding protein 7	protein-coding
unique_peak2-34780-5-4--0.0263084308932156-0.909929411522249	chr15	60167020	60167362	+	0	NA	Intergenic	Intergenic	-319018	NM_027668	71088	Mm.425950	NM_027668	ENSMUSG00000071749	4933412E24Rik	-	RIKEN cDNA 4933412E24 gene	protein-coding
common_peak2-29922-19-6-1.59533240460408-2.21753093801298	chr6	115499944	115500375	+	0	NA	intron (NM_199033, intron 3 of 11)	PB1D10|SINE|Alu	5437	NM_199033	381802	Mm.291208	NM_199033	ENSMUSG00000042389	Tsen2	AU067695	tRNA splicing endonuclease 2 homolog (S. cerevisiae)	protein-coding
unique_peak1-4496-106-40-1.98021485038764-17.4519445005948	chr3	5860259	5860895	+	0	NA	Intergenic	LSU-rRNA_Hsa|rRNA|rRNA	-284329	NM_001163305	19302	Mm.132336	NM_008994	ENSMUSG00000040374	Pex2	D3Ertd138e|PAF-1|PMP35|Pxmp3	peroxisomal biogenesis factor 2	protein-coding
unique_peak1-3118-10-2-1.77145284428761-2.09384600808989	chr18	34423858	34424453	+	0	NA	intron (NM_007462, intron 2 of 15)	MTC-int|LTR|MaLR	-42729	NR_040534	633395	Mm.414290	NR_040534	ENSMUSG00000073607	Gm10548	ENSMUSG00000073607	ribosomal protein L29 pseudogene	pseudo
common_peak2-31495-23-28--0.136213490618491-0.317118655902079	chr8	106682997	106683560	+	0	NA	Intergenic	Lx6|LINE|L1	-11135	NM_001141924	65115	Mm.41849	NM_001141922	ENSMUSG00000031872	Bean1	Bean	brain expressed, associated with Nedd4, 1	protein-coding
common_peak1-18331-20-16-0.400611943340854-0.507611860039817	chr8	61247562	61248436	+	0	NA	intron (NM_175032, intron 1 of 11)	intron (NM_175032, intron 1 of 11)	-68406	NM_001177534	100271928	Mm.484123	NM_001177534		Gm15881	OTTMUSG00000027193	predicted gene 15881	protein-coding
common_peak1-19116-8-1-2.00522241794757-2.05605744720049	chr9	75773477	75773896	+	0	NA	Intergenic	Intergenic	-89098	NM_173731	208982	Mm.82306	NM_173731	ENSMUSG00000007908	Hmgcll1	BC037381	3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1	protein-coding
common_peak2-30818-7-4-0.477162735410827-1.09384600808989	chr7	128531648	128532077	+	0	NA	Intergenic	MLT1J|LTR|MaLR	-3948	NM_001081327	195646	Mm.247449	NM_177575	ENSMUSG00000046321	Hs3st2	6430516N12Rik|A830061E14Rik|AW491345	heparan sulfate (glucosamine) 3-O-sulfotransferase 2	protein-coding
common_peak1-16418-8-17--1.16470258349474-1.02063122982878	chr5	129715446	129715917	+	0	NA	Intergenic	Intergenic	113056	NM_001081342	243277	Mm.440501	NM_177734	ENSMUSG00000044017	Gpr133	E230012M21Rik	G protein-coupled receptor 133	protein-coding
common_peak1-8517-38-49--0.0724035304761941-0.303268666669768	chr10	84576399	84577217	+	0	NA	intron (NM_001013028, intron 2 of 2)	RMER15|LTR|ERVL	11436	NM_001013028	103266	Mm.335025	NM_001013028	ENSMUSG00000060935	Tmem263	AI597468	transmembrane protein 263	protein-coding
common_peak2-30566-18-18-0.0649916377847664-0.323898164595606	chr7	79323308	79324162	+	0	NA	intron (NM_001024703, intron 14 of 22)	L1_Mur3|LINE|L1	127746	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding
common_peak1-18950-19-47--1.18227517405947-2.51566814918164	chr9	50616669	50617463	+	0	NA	intron (NR_045601, intron 12 of 13)	(GA)n|Simple_repeat|Simple_repeat	33736	NR_045601	102580	Mm.160035	NM_133981	ENSMUSG00000032059	Alg9	8230402H15Rik|AI747665|B430313H07Rik|Dibd1	asparagine-linked glycosylation 9 (alpha 1,2 mannosyltransferase)	protein-coding
common_peak2-19981-15-18--0.235762762887929-0.326591483156968	chr1	133670705	133671347	+	0	NA	Intergenic	ORR1A4-int|LTR|MaLR	-22946	NM_178079	212933	Mm.23844	NM_178079	ENSMUSG00000042251	Pm20d1	4732466D17Rik|AI098026	peptidase M20 domain containing 1	protein-coding
common_peak2-26700-9-4-0.867685311516858-1.36011389749466	chr2	127133995	127134402	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-27697	NM_010090	13537	Mm.4729	NM_010090	ENSMUSG00000027368	Dusp2	PAC1	dual specificity phosphatase 2	protein-coding
common_peak1-10529-11-24--1.13516260552311-1.3750876294627	chr14	13623204	13623708	+	0	NA	intron (NM_012061, intron 1 of 28)	MIRm|SINE|MIR	32137	NM_001042617	27062	Mm.260881	NM_012061	ENSMUSG00000054423	Cadps	AU067781|CAPS|CAPS1|mKIAA1121	Ca2+-dependent secretion activator	protein-coding
unique_peak2-33765-2-5--1.50241675698448-1.08602067057793	chr11	118008001	118008436	+	0	NA	Intergenic	ID_B1|SINE|B4	-17685	NM_001167746	69926	Mm.473893	NM_001167746	ENSMUSG00000033987	Dnah17	2810003K23Rik|Dnahc17|Dnahcl1|Gm1178|mKIAA3028	dynein, axonemal, heavy chain 17	protein-coding
unique_peak1-617-12-5-1.06381348436648-1.78669045979184	chr10	23787864	23788590	+	0	NA	Intergenic	RMER3D-int|LTR|ERVK	-8079	NM_001010830	215859	Mm.377239	NM_001010830	ENSMUSG00000096442	Taar8a	Gm230|taR-8a	trace amine-associated receptor 8A	protein-coding
common_peak2-27577-11-21--0.950738034385684-0.991115276827166	chr3	100162481	100163060	+	0	NA	Intergenic	Intergenic	-67558	NR_040543	73806	Mm.396549	NR_040543	ENSMUSG00000086923	4930406D18Rik	-	RIKEN cDNA 4930406D18 gene	ncRNA
unique_peak1-902-13-5-1.19350952991661-1.95509489018123	chr11	40400881	40401603	+	0	NA	Intergenic	Intergenic	104942	NM_134017	108645	Mm.293771	NM_134017	ENSMUSG00000042032	Mat2b	1110064C04Rik|2410018D16Rik|AI182287|AU022853|MAT-II|MATIIbeta|TGR	methionine adenosyltransferase II, beta	protein-coding
common_peak1-15589-16-7-1.11826364226806-1.23399803405144	chr4	129563295	129564001	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-19822	NR_045190	319894	Mm.59196	NR_045190	ENSMUSG00000086369	E330017L17Rik	-	RIKEN cDNA E330017L17 gene	ncRNA
common_peak2-23503-21-24--0.0743669245084888-0.301029995663979	chr15	76293886	76295032	+	0	NA	intron (NM_013481, intron 3 of 15)	intron (NM_013481, intron 3 of 15)	6591	NM_198885	20289	Mm.322821	NM_198885	ENSMUSG00000034161	Scx	BB114693|Bhlha41|Scl	scleraxis	protein-coding
common_peak2-25386-58-78--0.00783081328660629-0.302413108461692	chr18	88893389	88894536	+	0	NA	Intergenic	L1Md_F2|LINE|L1	169637	NM_018821	54607	Mm.91920	NM_018821	ENSMUSG00000056153	Socs6	1500012M23Rik|5830401B18Rik|AI447482|Cis4|Cish4|HSPC060|SOCS-4|SOCS-6|SSI4|STAI4|STATI4|Socs4	suppressor of cytokine signaling 6	protein-coding
common_peak2-25657-14-6-1.09186123830004-1.16633110333236	chr19	10286768	10287173	+	0	NA	exon (NM_001033481, exon 22 of 26)	exon (NM_001033481, exon 22 of 26)	6447	NM_001163431	69038	Mm.375100	NM_026919	ENSMUSG00000036372	Tmem258	1810006K21Rik	transmembrane protein 258	protein-coding
common_peak1-15261-20-57--1.36990621053638-3.78802519259417	chr4	21931041	21931962	+	0	NA	Intergenic	Intergenic	73028	NM_175234	76132	Mm.159689	NM_175234		Faxc	6230409E13Rik|AW742931	failed axon connections homolog (Drosophila)	protein-coding
unique_peak2-37812-2-8--2.08737925770563-1.65811743852845	chr5	123991663	123992185	+	0	NA	intron (NM_029929, intron 8 of 12)	ETnERV3-int|LTR|ERVK	-17751	NM_023232	66593	Mm.46716	NM_023232	ENSMUSG00000029433	Diablo	0610041G12Rik|1700006L01Rik|AU040403|Smac	diablo homolog (Drosophila)	protein-coding
common_peak2-27580-21-34--0.559793751678731-0.677299098039755	chr3	100922224	100923060	+	0	NA	Intergenic	L1Md_A|LINE|L1	-8553	NM_011197	19221	Mm.24807	NM_011197	ENSMUSG00000027864	Ptgfrn	4833445A08Rik|AU042434|CD9P-1|FPRP|Trim45	prostaglandin F2 receptor negative regulator	protein-coding
common_peak2-28726-12-5-1.06381348436648-1.78669045979184	chr5	36178650	36179005	+	0	NA	intron (NM_001177700, intron 9 of 16)	intron (NM_001177700, intron 9 of 16)	-57141	NM_027373	70292	Mm.125167	NM_027373	ENSMUSG00000029094	Afap1	2600003E23Rik|9630044L16Rik|AI848729|Afap|mKIAA3018	actin filament associated protein 1	protein-coding
common_peak1-12265-34-63--0.617931472998734-1.219227950326	chr17	40879703	40880807	+	0	NA	Intergenic	L1VL4|LINE|L1	16186	NM_001038500	619517	Mm.391018	NM_001038500	ENSMUSG00000073396	Esp1	EG619517|Gm6084	exocrine gland secreted peptide 1	protein-coding
common_peak1-10031-12-22--0.874785970969374-0.809260849721102	chr13	13392971	13393628	+	0	NA	Intergenic	RLTR13D5|LTR|ERVK	92592	NM_031999	83924	Mm.379269	NM_031999	ENSMUSG00000021306	Gpr137b	AI788917|AU016435|AW546472|C730041E01|C80550|C80741|D13Abb1e|Tm7sf1	G protein-coupled receptor 137B	protein-coding
common_peak1-10927-14-8-0.729291158915332-0.771068449301682	chr15	9070129	9070828	+	0	NA	promoter-TSS (NM_013787)	promoter-TSS (NM_013787)	152	NM_177178	320506	Mm.259886	NM_177178	ENSMUSG00000039704	Lmbrd2	9930036E21Rik	LMBR1 domain containing 2	protein-coding
common_peak2-22959-17-10-0.75886471956774-0.917676348953458	chr14	52106476	52107029	+	0	NA	Intergenic	Intergenic	35115	NM_009486	22301	Mm.482572	NM_009486	ENSMUSG00000070448	Vmn2r89	V2r10|V2r11	vomeronasal 2, receptor 89	protein-coding
common_peak2-24990-20-25--0.212364933549899-0.342639663781856	chr18	10325044	10325893	+	0	NA	intron (NM_001083628, intron 1 of 32)	CpG	291	NM_001083628	381157	Mm.261535	NM_001083628	ENSMUSG00000042942	Greb1l	mKIAA4095	growth regulation by estrogen in breast cancer-like	protein-coding
unique_peak2-35768-8-11--0.579740082773585-1.14218153353838	chr18	43393483	43393975	+	0	NA	intron (NM_178749, intron 2 of 12)	intron (NM_178749, intron 2 of 12)	26378	NM_178749	269019	Mm.150401	NM_178749	ENSMUSG00000039954	Stk32a	A930015B13Rik|YANK1	serine/threonine kinase 32A	protein-coding
common_peak1-15394-12-11-0.0638134843664826-0.337263207250336	chr4	80911101	80911549	+	0	NA	Intergenic	Intergenic	177384	NM_010820	17475	Mm.153039	NM_010820	ENSMUSG00000028402	Mpdz	AI225843|B930003D11Rik|MUPP1	multiple PDZ domain protein	protein-coding
unique_peak2-39929-2-9--2.23938235115068-1.87199725847353	chrX	106171379	106172039	+	0	NA	Intergenic	Lx5|LINE|L1	-25115	NR_033596	70550	Mm.482937	NR_033596	ENSMUSG00000081793	5730416F02Rik	-	capping protein (actin filament), gelsolin-like pseudogene	pseudo
unique_peak1-6881-25-6-2.0544949832875-3.87314773301527	chr8	91507319	91508451	+	0	NA	Intergenic	B4A|SINE|B4	-40749	NR_106190	102465899		NR_106190	miRBase:MI0026042	Mir8110	mmu-mir-8110	microRNA mir-8110	ncRNA
common_peak2-20712-14-22--0.624345795699369-0.590343908676233	chr10	94380729	94381509	+	0	NA	intron (NM_018797, intron 2 of 30)	MIR|SINE|MIR	26093	NM_018797	54712	Mm.256712	NM_018797	ENSMUSG00000074785	Plxnc1	2510048K12Rik|AW742158|CD232|Vespr	plexin C1	protein-coding
unique_peak1-3898-37-5-2.94103057076466-8.54919107256478	chr2	20899484	20900422	+	0	NA	Intergenic	Intergenic	9452	NR_033225	433408	Mm.386941	NR_033225		Gm13375	OTTMUSG00000011664	predicted gene 13375	ncRNA
common_peak1-16288-39-32-0.5713671275607-1.08158034290997	chr5	111330122	111331617	+	0	NA	intron (NM_001267622, intron 2 of 23)	L1VL4|LINE|L1	22047	NM_001267622	209683	Mm.295660	NM_024477	ENSMUSG00000033209	Ttc28	2310015L07Rik|6030435N04|AI428795|AI851761|BC002262|TPRBK	tetratricopeptide repeat domain 28	protein-coding
common_peak1-17963-14-11-0.314253659636488-0.435191258261915	chr7	130654000	130654694	+	0	NA	Intergenic	Lx8|LINE|L1	-10384	NM_001081329	210162	Mm.135397	NM_175435	ENSMUSG00000030757	Zkscan2	9430065N20Rik|AW493225|Zfp694	zinc finger with KRAB and SCAN domains 2	protein-coding
common_peak1-10143-25-23-0.27688740462395-0.451698068655807	chr13	34162670	34163559	+	0	NA	intron (NM_026512, intron 6 of 6)	intron (NM_026512, intron 6 of 6)	6763	NM_009450	22151	Mm.422827	NM_009450	ENSMUSG00000058672	Tubb2a	M(beta)2|Tubb2	tubulin, beta 2A class IIA	protein-coding
common_peak1-9851-26-14-1.02100849654994-1.59386218057211	chr12	79905837	79906843	+	0	NA	intron (NM_019579, intron 3 of 14)	(TTA)n|Simple_repeat|Simple_repeat	56285	NM_023721	73834	Mm.491124	NM_023721	ENSMUSG00000021114	Atp6v1d	1110004P10Rik|Atp6m|VATD|Vma8	ATPase, H+ transporting, lysosomal V1 subunit D	protein-coding
common_peak2-30485-15-7-1.01216475055566-1.08658567012551	chr7	55794112	55794616	+	0	NA	Intergenic	L1Md_F2|LINE|L1	19092	NM_175531	243979	Mm.83689	NM_175531	ENSMUSG00000050425	Mrgprb2	4833406I20Rik|Mgrg14	MAS-related GPR, member B2	protein-coding
unique_peak2-37757-5-5--0.289342836727009-0.909929411522249	chr5	113226337	113226729	+	0	NA	intron (NR_040675, intron 2 of 3)	intron (NR_040675, intron 2 of 3)	4221	NR_040676	67360	Mm.59218	NR_040675	ENSMUSG00000098230	1700095B10Rik	-	RIKEN cDNA 1700095B10 gene	ncRNA
unique_peak2-35362-2-8--2.08737925770563-1.65811743852845	chr17	26917170	26917487	+	0	NA	promoter-TSS (NM_172149)	promoter-TSS (NM_172149)	-696	NM_172149	224630	Mm.21795	NM_172149	ENSMUSG00000024191	Bnip1	2010005M06Rik|5930429G21Rik|Sec20	BCL2/adenovirus E1B interacting protein 1	protein-coding
unique_peak2-32764-12-21--0.810655633549659-0.713635438203849	chr1	171437685	171438507	+	0	NA	intron (NM_023284, intron 10 of 13)	intron (NM_023284, intron 10 of 13)	23499	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
common_peak2-29795-52-36-0.898806624636749-2.59178042653149	chr6	90795759	90797086	+	0	NA	Intergenic	L1MEc|LINE|L1	-36305	NM_001134384	232227	Mm.196943	NM_182784	ENSMUSG00000034312	Iqsec1	AW561907|BC026481|BRAG2|D6Ertd349e|cI-43	IQ motif and Sec7 domain 1	protein-coding
unique_peak2-33086-3-4--0.73591118484664-0.864171920961574	chr10	80159460	80159778	+	0	NA	intron (NM_172457, intron 1 of 3)	intron (NM_172457, intron 1 of 3)	4946	NM_172457	208228	Mm.49309	NM_172457	ENSMUSG00000003348	Mob3a	5330417K06Rik|A630029F06|AV218468|Mobkl2a	MOB kinase activator 3A	protein-coding
common_peak1-17614-52-48-0.493550146150491-1.12396031894769	chr7	45459978	45461679	+	0	NA	Intergenic	Intergenic	1059076	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak2-22818-5-7--0.704380336005853-1.01466476204226	chr14	17920372	17920738	+	0	NA	Intergenic	ORR1B1|LTR|MaLR	-5710	NM_001289761	218772	Mm.259318	NM_011243	ENSMUSG00000017491	Rarb	A830025K23|Hap|Nr1b2	retinoic acid receptor, beta	protein-coding
unique_peak2-37898-4-12--1.72390023199434-1.85743853830261	chr5	142402266	142402861	+	0	NA	intron (NM_177879, intron 5 of 44)	L1Md_A|LINE|L1	-474888	NM_199068	17425	Mm.24214	NM_010812	ENSMUSG00000056493	Foxk1	A630048H08Rik|AI463295|ENSMUSG00000075577|Gm10868|Mnf	forkhead box K1	protein-coding
common_peak2-31972-8-7-0.00522241794757061-1.00793137938329	chr9	67396210	67396645	+	0	NA	intron (NM_001081242, intron 1 of 57)	intron (NM_001081242, intron 1 of 57)	11083	NM_001081242	70549	Mm.33645	NM_027458	ENSMUSG00000052698	Tln2	5730421P04Rik|AI507121|AI787438|AL118320|mKIAA0320	talin 2	protein-coding
common_peak1-16345-91-149--0.155386744893542-0.450952931130511	chr5	118559471	118561239	+	0	NA	intron (NM_172721, intron 5 of 10)	intron (NM_172721, intron 5 of 10)	45112	NM_172721	231672	Mm.221769	NM_172721	ENSMUSG00000032867	Fbxw8	4930438M06Rik|FBW6|FBW8|FBXO29|Fbx29	F-box and WD-40 domain protein 8	protein-coding
unique_peak2-39466-3-7--1.41398308995928-1.23214870625617	chr9	56090984	56091503	+	0	NA	intron (NM_172924, intron 4 of 6)	intron (NM_172924, intron 4 of 6)	-82366	NM_019793	56434	Mm.28484	NM_019793	ENSMUSG00000032324	Tspan3	1700055K04Rik|TM4-A|Tm4sf8	tetraspanin 3	protein-coding
common_peak2-26492-121-113-0.734475767713257-4.59705054031581	chr2	84518924	84521534	+	0	NA	intron (NM_025885, intron 1 of 4)	B2_Mm2|SINE|B2	-1244	NM_025868	66958	Mm.371621	NM_025868	ENSMUSG00000050043	Tmx2	2310042M24Rik|AA589631|Txndc14	thioredoxin-related transmembrane protein 2	protein-coding
unique_peak1-2618-7-1-1.79909083029819-1.80617997398389	chr16	36692760	36693259	+	0	NA	Intergenic	Intergenic	-1055	NM_001285788	106347	Mm.17807	NM_134109	ENSMUSG00000022900	Ildr1	AU041483|AU044638	immunoglobulin-like domain containing receptor 1	protein-coding
unique_peak1-4219-12-6-0.841421063030034-1.58711810488664	chr2	121090575	121091198	+	0	NA	intron (NM_001290830, intron 4 of 26)	(CCA)n|Simple_repeat|Simple_repeat	6257	NM_001290830	27223	Mm.215389	NM_013735	ENSMUSG00000043909	Trp53bp1	53BP1|Tp53bp1|m53BP1|p53BP1	transformation related protein 53 binding protein 1	protein-coding
common_peak2-26678-10-7-0.356415345008769-1.12966497611638	chr2	122764963	122765278	+	0	NA	Intergenic	Intergenic	157385	NM_021507	59010	Mm.28986	NM_021507	ENSMUSG00000005803	Sqrdl	0610039J17Rik|4930557M22Rik	sulfide quinone reductase-like (yeast)	protein-coding
common_peak1-18319-13-9-0.456543935750406-0.53895475198017	chr8	54610831	54611460	+	0	NA	Intergenic	Intergenic	14089	NM_001005847	11593	Mm.334535	NM_001005847	ENSMUSG00000031521	Aga	AW060726	aspartylglucosaminidase	protein-coding
common_peak1-18860-55-41-0.812302448373941-2.38651324195789	chr9	21238155	21239433	+	0	NA	intron (NM_001253893, intron 1 of 20)	B2_Mm1a|SINE|B2	9442	NM_001039520	13430	Mm.433257	NM_007871	ENSMUSG00000033335	Dnm2	Dyn2|Udnm|b2b2159Clo	dynamin 2	protein-coding
common_peak1-16067-14-17--0.270708841084668-0.328191099940267	chr5	52669323	52669890	+	0	NA	Intergenic	Intergenic	-61934	NR_040717	414111	Mm.417638	NR_040717		C130083M11Rik	-	RIKEN cDNA C130083M11 gene	ncRNA
common_peak1-16258-17-10-0.75886471956774-0.917676348953458	chr5	105792776	105793543	+	0	NA	Intergenic	ETnERV3-int|LTR|ERVK	-17668	NM_001039647	634650	Mm.458435	NM_001039647	ENSMUSG00000092021	Gbp11	EG634650|Gm7141	guanylate binding protein 11	protein-coding
common_peak1-12018-20-28--0.369906210536379-0.457753417732779	chr17	15497647	15498348	+	0	NA	Intergenic	Intergenic	-6572	NR_033511	100038481	Mm.387544	NR_033511		Gm10510	ENSMUSG00000073453	predicted gene 10510	ncRNA
unique_peak2-35613-3-6--1.22133801201688-1.08602067057793	chr17	84119176	84119593	+	0	NA	intron (NM_001171053, intron 3 of 13)	L1_Mur3|LINE|L1	13881	NM_001171052	116871	Mm.277668	NM_054082	ENSMUSG00000055817	Mta3	1110002J22Rik|mKIAA1266	metastasis associated 3	protein-coding
common_peak2-30591-15-7-1.01216475055566-1.08658567012551	chr7	80825125	80825647	+	0	NA	Intergenic	RSINE1|SINE|B4	6063	NR_033604	244061	Mm.484605	NR_033604		Gm4971	EG244061	Smad nuclear interacting protein 1 pseudogene	pseudo
unique_peak1-727-15-1-3.01216475055566-4.18809100057339	chr10	95918690	95919389	+	0	NA	Intergenic	L1MC3|LINE|L1	-160596	NM_007569	12226	Mm.23811	NM_007569	ENSMUSG00000036478	Btg1	AI426953|AW546738	B cell translocation gene 1, anti-proliferative	protein-coding
unique_peak1-1797-38-4-3.24952456441117-9.83023526052149	chr14	24793959	24795291	+	0	NA	intron (NM_001253378, intron 1 of 27)	intron (NM_001253378, intron 1 of 27)	28802	NM_001253375	16531	Mm.343607	NM_010610	ENSMUSG00000063142	Kcnma1	5730414M22Rik|BKCa|MaxiK|Slo|Slo1|mSlo|mSlo1	potassium large conductance calcium-activated channel, subfamily M, alpha member 1	protein-coding
unique_peak2-39175-2-4--1.23938235115068-0.931118710592187	chr8	94870296	94870694	+	0	NA	intron (NR_033641, intron 3 of 6)	intron (NR_033641, intron 3 of 6)	9524	NR_110452	71296	Mm.86664	NR_033641	ENSMUSG00000031736	Crnde	4933436C20Rik	colorectal neoplasia differentially expressed (non-protein coding)	ncRNA
unique_peak1-3352-35-5-2.84640775774135-7.78488400510919	chr19	25574823	25576323	+	0	NA	Intergenic	Intergenic	-4623	NM_015826	50796	Mm.391208	NM_015826	ENSMUSG00000024837	Dmrt1	-	doublesex and mab-3 related transcription factor 1	protein-coding
unique_peak2-36177-0-5--3.42509343119537-1.32905871926422	chr2	29715648	29716005	+	0	NA	Intergenic	Intergenic	-9188	NM_207298	99151	Mm.296336	NM_207298	ENSMUSG00000039787	Cercam	2600006K01Rik|AL024097|Ceecam1	cerebral endothelial cell adhesion molecule	protein-coding
common_peak2-26903-31-30-0.271042360426248-0.460129356264044	chr2	158522733	158524059	+	0	NA	intron (NM_153089, intron 2 of 10)	B1_Mus2|SINE|Alu	30525	NM_001159662	228852	Mm.150540	NM_153089	ENSMUSG00000037754	Ppp1r16b	ANKRD4|C130078N17Rik|TIMAP|Wdt4	protein phosphatase 1, regulatory (inhibitor) subunit 16B	protein-coding
common_peak1-7522-40-39-0.337047587863736-0.649502410911277	chr1	24099283	24100375	+	0	NA	intron (NM_026604, intron 1 of 20)	MTC|LTR|MaLR	7351	NM_026604	68187	Mm.87130	NM_026604	ENSMUSG00000026153	Fam135a	4921533L14Rik|AI256732|AI835491	family with sequence similarity 135, member A	protein-coding
unique_peak1-1956-16-0-4.11826364226806-5.41853992195166	chr14	101836804	101837448	+	0	NA	Intergenic	Intergenic	171282	NM_001081278	210789	Mm.320639	NM_173380	ENSMUSG00000033083	Tbc1d4	5930406J04Rik|A930035N22|AV295684|As160	TBC1 domain family, member 4	protein-coding
unique_peak2-37643-5-10--1.16381195464315-1.33892459842472	chr5	77310488	77310985	+	0	NA	intron (NM_173765, intron 12 of 15)	MLT1F1|LTR|MaLR	23803	NM_173765	231326	Mm.39271	NM_173765	ENSMUSG00000055923	Aasdh	A230062G08Rik|A830035E16|Acsf4|U26	aminoadipate-semialdehyde dehydrogenase	protein-coding
unique_peak2-34860-5-9--1.02630843089322-1.21398586181642	chr15	77149419	77149824	+	0	NA	Intergenic	RMER1B|Other|Other	-12138	NM_053104	93686	Mm.202774	NM_053104	ENSMUSG00000033565	Rbfox2	Fbm2|Fxh|Hrnbp2|Rbm9	RNA binding protein, fox-1 homolog (C. elegans) 2	protein-coding
common_peak1-16723-42-58--0.140313721494658-0.332057628060234	chr6	30303346	30304841	+	0	NA	Intergenic	Intergenic	36917	NM_172735	232679	Mm.29780	NM_172735	ENSMUSG00000039130	Zc3hc1	1110054L24Rik|AU018540|AU019789|HSPC216|Nipa	zinc finger, C3HC type 1	protein-coding
common_peak2-31330-8-7-0.00522241794757061-1.00793137938329	chr8	83594006	83594435	+	0	NA	Intergenic	Intergenic	-55415	NM_027554	74841	Mm.246018	NM_027554	ENSMUSG00000038250	Usp38	4631402N15Rik|4833420O05Rik|AA536967|AU044701|AW544820|mKIAA1891	ubiquitin specific peptidase 38	protein-coding
common_peak1-11357-30-45--0.35388654656514-0.51862626278861	chr15	89211303	89212145	+	0	NA	Intergenic	B3|SINE|B2	-2039	NM_001013022	70113	Mm.247273	NM_001013022	ENSMUSG00000047394	Odf3b	2010001J22Rik	outer dense fiber of sperm tails 3B	protein-coding
common_peak1-8164-32-19-0.957163924332297-1.82978420966174	chr1	194976020	194977035	+	0	NA	Intergenic	URR1A|DNA|MER1_type	-2779	NM_016851	54139	Mm.273695	NM_016851	ENSMUSG00000026638	Irf6	AI876454|E230028I05Rik|mirf6	interferon regulatory factor 6	protein-coding
common_peak1-17576-68-106--0.17150620710285-0.431815803112122	chr7	35802013	35803283	+	0	NA	intron (NM_008820, intron 9 of 14)	intron (NM_008820, intron 9 of 14)	38937	NM_009884	12611	Mm.273090	NM_009884	ENSMUSG00000056216	Cebpg	C/EBP[g]|C/EBPgamma|GPE1-BP|Gpe1bp|Ig/EBP	CCAAT/enhancer binding protein (C/EBP), gamma	protein-coding
common_peak1-17594-33-48--0.28337228158968-0.459173512026158	chr7	44495951	44497317	+	0	NA	Intergenic	Intergenic	2023270	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak2-33130-6-14--1.34149248522822-1.01572999746118	chr10	81770766	81771232	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-66979	NM_001105557	237411		NM_172789	ENSMUSG00000062931	Zfp938	B230315N10Rik	zinc finger protein 938	protein-coding
common_peak2-27536-20-15-0.488074784591193-0.590343908676236	chr3	96086276	96087185	+	0	NA	TTS (NM_010186)	TTS (NM_010186)	11162	NM_010186	14129	Mm.150	NM_010186	ENSMUSG00000015947	Fcgr1	AI323638|AV092959|CD64|FcgammaRI|IGGHAFC	Fc receptor, IgG, high affinity I	protein-coding
common_peak1-18398-29-31-0.112290080615111-0.353704024845522	chr8	71700637	71701787	+	0	NA	Intergenic	Intergenic	-31733	NM_001013379	234358	Mm.334577	NM_001013379		Zfp930	-	zinc finger protein 930	protein-coding
unique_peak1-2903-8-6-0.197867495889966-1.03789460276074	chr17	45958279	45958726	+	0	NA	Intergenic	ORR1D2|LTR|MaLR	-87709	NM_028164	72240	Mm.482897	NM_028164	ENSMUSG00000094690	1600014C23Rik	-	RIKEN cDNA 1600014C23 gene	protein-coding
common_peak1-16541-27-28-0.133564955767664-0.358978896303361	chr5	143328531	143329937	+	0	NA	intron (NM_001122730, intron 16 of 18)	intron (NM_001122730, intron 16 of 18)	-40000	NM_009362	21784	Mm.2854	NM_009362	ENSMUSG00000024032	Tff1	Bcei|PS2	trefoil factor 1	protein-coding
common_peak2-25718-30-18-0.921747896048288-1.62918185056051	chr19	22917363	22918196	+	0	NA	intron (NM_177341, intron 8 of 26)	L1_Mus1|LINE|L1	92684	NR_029591	387200		NR_029591		Mir204	Mirn204|mmu-mir-204	microRNA 204	ncRNA
unique_peak2-39967-1-6--2.43441193227435-1.56314192529759	chrX	144101447	144101816	+	0	NA	Intergenic	L1_Mur2|LINE|L1	-113007	NM_001081173	210297	Mm.30506	NM_001081173	ENSMUSG00000031290	Lrch2	AI316885|mKIAA1495	leucine-rich repeats and calponin homology (CH) domain containing 2	protein-coding
unique_peak1-6474-8-5-0.420259917226415-1.10484139239135	chr7	110893928	110894497	+	0	NA	Intergenic	Intergenic	-4376	NM_146821	258818	Mm.377707	NM_146821	ENSMUSG00000047545	Olfr629	MOR26-2	olfactory receptor 629	protein-coding
common_peak2-20304-19-27--0.404667595395917-0.464317215211849	chr1	195091776	195092549	+	0	NA	Intergenic	BGLII_B|LTR|ERVK	-1923	NM_008288	15483	Mm.28328	NM_008288	ENSMUSG00000016194	Hsd11b1	-	hydroxysteroid 11-beta dehydrogenase 1	protein-coding
unique_peak2-32661-4-6--0.830815435910851-0.989110657569874	chr1	134984829	134985261	+	0	NA	intron (NM_001099276, intron 16 of 32)	intron (NM_001099276, intron 16 of 32)	42456	NM_001099276	240752	Mm.387308	NM_001099276	ENSMUSG00000026447	Pik3c2b	C330011J12Rik|Gm199|PI3K-C2beta|PI3KC2beta	phosphoinositide-3-kinase, class 2, beta polypeptide	protein-coding
unique_peak1-7228-11-1-2.50869358425161-2.83420869758413	chr9	73103451	73103946	+	0	NA	Intergenic	MER67C|LTR|ERV1	142422	NM_198609	225215	Mm.379366	NM_198609	ENSMUSG00000032215	Rsl24d1	2410159K22Rik	ribosomal L24 domain containing 1	protein-coding
common_peak1-12250-14-17--0.270708841084668-0.328191099940267	chr17	35969944	35970546	+	0	NA	TTS (NM_008027)	TTS (NM_008027)	5001	NM_011655	22154	Mm.273538	NM_011655	ENSMUSG00000001525	Tubb5	AA408537|AI596182|B130022C14Rik|M(beta)5	tubulin, beta 5 class I	protein-coding
common_peak2-23708-20-20-0.0957573618124323-0.321718508207528	chr15	89178225	89179177	+	0	NA	Intergenic	Intergenic	7389	NM_178919	105847	Mm.34511	NM_178919	ENSMUSG00000022614	Lmf2	AI451006|Tmem112b|Tmem153	lipase maturation factor 2	protein-coding
unique_peak2-34909-5-7--0.704380336005853-1.01466476204226	chr15	83168355	83168698	+	0	NA	intron (NM_025445, intron 2 of 15)	intron (NM_025445, intron 2 of 15)	12151	NM_025445	66251	Mm.258910	NM_025445	ENSMUSG00000054277	Arfgap3	0610009H19Rik|1810004P07Rik|1810035F16Rik|9130416J18Rik|Arfgap1	ADP-ribosylation factor GTPase activating protein 3	protein-coding
unique_peak2-34609-10-10--0.103016273628528-0.301029995663987	chr14	74865088	74865822	+	0	NA	Intergenic	(CATATA)n|Simple_repeat|Simple_repeat	110121	NR_046059	74425	Mm.399498	NR_046059		4933402J15Rik	-	RIKEN cDNA 4933402J15 gene	ncRNA
unique_peak1-4932-10-7-0.356415345008769-1.12966497611638	chr4	62524731	62525349	+	0	NA	Intergenic	IAPLTR1_Mm|LTR|ERVK	-101568	NM_028326	72701	Mm.26479	NM_028326	ENSMUSG00000028358	Zfp618	2810031P15Rik|2810040O04Rik|AI415580|AI505139|D430033D05Rik|Nedd10|Znf618|bM257P7.1	zinc finger protein 618	protein-coding
common_peak2-25223-7-6--0.00826409175941478-0.97990265578305	chr18	61634229	61634675	+	0	NA	intron (NR_045419, intron 1 of 3)	intron (NR_045419, intron 1 of 3)	9809	NR_045419	442846	Mm.417648	NR_045419		A530050N04Rik	-	RIKEN cDNA A530050N04 gene	ncRNA
unique_peak1-665-7-1-1.79909083029819-1.80617997398389	chr10	60028305	60028722	+	0	NA	intron (NR_045556, intron 7 of 68)	intron (NR_045556, intron 7 of 68)	130725	NM_001252635	22295	Mm.440327	NM_023370	ENSMUSG00000012819	Cdh23	4930542A03Rik|USH1D|ahl|ahl1|bob|bus|mdfw|nmf112|nmf181|nmf252|sals|v	cadherin 23 (otocadherin)	protein-coding
common_peak1-18320-15-9-0.690236655668294-0.732381977911291	chr8	56232094	56232910	+	0	NA	Intergenic	Intergenic	192421	NM_001253756	234267	Mm.241700	NM_153581	ENSMUSG00000031517	Gpm6a	Gpm6|M6A	glycoprotein m6a	protein-coding
unique_peak1-204-24-1-3.79320990276772-7.14178280843185	chr1	85703220	85704036	+	0	NA	Intergenic	Intergenic	-436487	NM_001037909	620078	Mm.386456	NM_175219	ENSMUSG00000052477	C130026I21Rik	4930565N07Rik|OTTMUSG00000029174	RIKEN cDNA C130026I21 gene	protein-coding
common_peak2-29723-16-8-0.948338640825749-1.02063122982878	chr6	84268197	84268636	+	0	NA	Intergenic	Intergenic	105416	NR_046063	100038556	Mm.387783	NR_046063		Gm10445	ENSMUSG00000072956	predicted gene 10445	ncRNA
unique_peak2-37328-4-7--1.02346051385325-1.09384600808989	chr4	129898955	129899259	+	0	NA	intron (NM_001034872, intron 1 of 9)	intron (NM_001034872, intron 1 of 9)	432	NM_001034872	332942	Mm.387701	NM_001034872	ENSMUSG00000023120	Gm853	OTTMUSG00000009560	predicted gene 853	protein-coding
common_peak1-8640-45-64--0.162009787683583-0.365132085969548	chr10	122046798	122048038	+	0	NA	Intergenic	MTD|LTR|MaLR	-40471	NR_040616	319272	Mm.411763	NR_040616		A130077B15Rik	-	RIKEN cDNA A130077B15 gene	ncRNA
unique_peak2-33117-4-6--0.830815435910851-0.989110657569874	chr10	81268230	81268593	+	0	NA	Intergenic	Intergenic	-6520	NM_001142963	100233208	Mm.327168	NM_001142963		Gm10778	ENSMUSG00000074860	predicted gene 10778	protein-coding
common_peak1-16599-17-18--0.0296311752385474-0.306899554715732	chr5	149353099	149353755	+	0	NA	intron (NM_011908, intron 1 of 4)	intron (NM_011908, intron 1 of 4)	10937	NM_011908	24109	Mm.21846	NM_011908	ENSMUSG00000001687	Ubl3	AW108023|HCG	ubiquitin-like 3	protein-coding
unique_peak1-6031-8-5-0.420259917226415-1.10484139239135	chr6	113661437	113661928	+	0	NA	TTS (NM_001033463)	TTS (NM_001033463)	4480	NR_106009	102465631		NR_106009		Mir7042	mmu-mir-7042	microRNA mir-7042	ncRNA
unique_peak1-4547-6-3-0.565398110380302-1.08602067057793	chr3	38251959	38252381	+	0	NA	Intergenic	RLTR20D|LTR|ERVK	131568	NM_001167883	99696	Mm.290937	NM_001033198	ENSMUSG00000044864	Ankrd50	AI662170|E430012K20Rik|mKIAA1223|mKIAA3019	ankyrin repeat domain 50	protein-coding
common_peak1-8772-45-86--0.582585470503856-1.49084094315847	chr11	6546248	6547678	+	0	NA	Intergenic	Intergenic	-8311	NM_011709	22373	Mm.268094	NM_011709	ENSMUSG00000000381	Wap	-	whey acidic protein	protein-coding
common_peak2-21204-28-31-0.0529591198214625-0.314603908022751	chr11	61207946	61209003	+	0	NA	Intergenic	IAP-d-int|LTR|ERVK	-16897	NM_026183	67473	Mm.100741	NM_026183	ENSMUSG00000010122	Slc47a1	1300013J15Rik|AI036982|MATE1|mMATE1	solute carrier family 47, member 1	protein-coding
common_peak2-32225-7-10--0.660340788339108-1.12966497611638	chr9	123021161	123021585	+	0	NA	promoter-TSS (NM_001081188)	promoter-TSS (NM_001081188)	950	NM_026917	69035	Mm.28300	NM_026917		Zdhhc3	1110020O22Rik|1810006O10Rik|2210017C02Rik|DHHC-3|GODZ|Gramp1|Zfp373	zinc finger, DHHC domain containing 3	protein-coding
common_peak2-20545-11-6-0.701338662194009-1.32595962126035	chr10	67786082	67786392	+	0	NA	Intergenic	Intergenic	-2347	NR_045357	75148	Mm.23505	NR_045357		4930545H06Rik	-	RIKEN cDNA 4930545H06 gene	ncRNA
common_peak2-25313-18-35--0.857005850213961-1.20071330053878	chr18	75325241	75326271	+	0	NA	intron (NM_027727, intron 13 of 16)	intron (NM_027727, intron 13 of 16)	131215	NR_045394	100503117	Mm.250517	NR_045393		2010010A06Rik	5033420E22Rik	RIKEN cDNA 2010010A06 gene	ncRNA
unique_peak1-6630-11-11--0.0762689164695427-0.301029995663976	chr8	10868019	10868580	+	0	NA	Intergenic	RMER1B|Other|Other	14155	NR_040705	320014	Mm.403203	NR_040705		B930025P03Rik	-	RIKEN cDNA B930025P03 gene	ncRNA
common_peak2-27668-8-6-0.197867495889966-1.03789460276074	chr3	109155615	109155897	+	0	NA	intron (NM_020505, intron 1 of 26)	intron (NM_020505, intron 1 of 26)	12155	NM_020505	57257	Mm.282257	NM_020505	ENSMUSG00000033721	Vav3	A530094I06Rik|AA986410|Idd18.1	vav 3 oncogene	protein-coding
common_peak2-20778-9-6-0.382258484346616-1.11707584880836	chr10	117906212	117906644	+	0	NA	Intergenic	Intergenic	28325	NM_008337	15978	Mm.240327	NM_008337	ENSMUSG00000055170	Ifng	IFN-g|Ifg	interferon gamma	protein-coding
common_peak2-25305-14-9-0.577288065470282-0.630231561310125	chr18	73836049	73836547	+	0	NA	intron (NM_008540, intron 2 of 11)	MER21B|LTR|ERV1	27097	NM_008540	17128	Mm.100399	NM_008540	ENSMUSG00000024515	Smad4	AW743858|D18Wsu70e|DPC4|Madh4	SMAD family member 4	protein-coding
common_peak2-23664-13-15--0.221527969362231-0.308519316180257	chr15	85523264	85523930	+	0	NA	Intergenic	Intergenic	-10606	NR_110483	102800312	Mm.33117	NR_110483		Mirlet7bhg	linc-Ppara	MIRLET7B host gene (non-protein coding)	ncRNA
common_peak2-30460-14-22--0.624345795699369-0.590343908676233	chr7	45679114	45679929	+	0	NA	Intergenic	Intergenic	840383	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak1-16520-12-25--1.05166373305345-1.1381569562463	chr5	140704343	140704783	+	0	NA	intron (NM_010752, intron 10 of 17)	intron (NM_010752, intron 10 of 17)	92943	NM_010752	17120	Mm.27250	NM_010752	ENSMUSG00000029554	Mad1l1	AI173502|AW550425|Mad1	MAD1 mitotic arrest deficient 1-like 1	protein-coding
common_peak2-20391-13-24--0.865384159136956-0.879255460030357	chr10	20090685	20091564	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	23499	NM_027930	71804	Mm.262151	NM_027930	ENSMUSG00000019992	Mtfr2	2610016C23Rik|4933412C16Rik|Dufd1|Fam54a	mitochondrial fission regulator 2	protein-coding
common_peak2-21837-13-17--0.391452970804544-0.364171515310935	chr11	120629692	120630434	+	0	NA	Intergenic	B1_Mur2|SINE|Alu	15455	NM_009053	19719	Mm.871	NM_009053	ENSMUSG00000025158	Rfng	-	RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase	protein-coding
unique_peak1-1843-13-3-1.77847203063777-2.58603100924543	chr14	46278175	46278953	+	0	NA	promoter-TSS (NM_001042719)	promoter-TSS (NM_001042719)	-746	NM_001042719	114874	Mm.121918	NM_176845	ENSMUSG00000037697	Ddhd1	PA-PLA1	DDHD domain containing 1	protein-coding
unique_peak1-1159-7-6--0.00826409175941478-0.97990265578305	chr11	99082437	99082949	+	0	NA	intron (NM_020618, intron 4 of 10)	intron (NM_020618, intron 4 of 10)	9638	NM_020618	57376	Mm.379086	NM_020618	ENSMUSG00000037935	Smarce1	2810417B20Rik|5830412H02Rik|9030408N19Rik|Baf27	SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	protein-coding
common_peak1-19224-35-56--0.401519755702237-0.672788403510108	chr9	106886579	106887351	+	0	NA	intron (NM_153413, intron 22 of 52)	intron (NM_153413, intron 22 of 52)	-92696	NM_029103	74840	Mm.29778	NM_029103	ENSMUSG00000032575	Manf	3230402M22Rik|AA407711|AA408789|AA673178|Armet|D17914|D18Mgi17	mesencephalic astrocyte-derived neurotrophic factor	protein-coding
common_peak1-15207-9-3-1.18961340640422-1.57096726280955	chr4	44072493	44072996	+	0	NA	exon (NM_015828, exon 3 of 12)	exon (NM_015828, exon 3 of 12)	12801	NM_001190414	50798	Mm.256718	NM_015828	ENSMUSG00000028479	Gne	2310066H07Rik|DMRV|GLCNE|IBM2|NM|Uae1	glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase	protein-coding
common_peak2-20054-17-32--0.826097781153416-1.02859851787301	chr1	150392382	150393133	+	0	NA	Intergenic	L1Md_T|LINE|L1	1415657	NM_008869	18783	Mm.4186	NM_008869	ENSMUSG00000056220	Pla2g4a	Pla2g4|cPLA2|cPLA2alpha	phospholipase A2, group IVA (cytosolic, calcium-dependent)	protein-coding
common_peak1-14064-43-52-0.054642730960504-0.319297110585539	chr2	120128032	120128978	+	0	NA	exon (NM_001024145, exon 17 of 20)	exon (NM_001024145, exon 17 of 20)	11396	NM_001024145	271844	Mm.24880	NM_001024145	ENSMUSG00000046971	Pla2g4f	4732472I07Rik|Gm647|Pla2zeta	phospholipase A2, group IVF	protein-coding
unique_peak1-5399-14-6-1.09186123830004-1.16633110333236	chr5	104382842	104383328	+	0	NA	Intergenic	Intergenic	23322	NM_198030	243168	Mm.284944	NM_198030	ENSMUSG00000034528	Hsd17b13	AI047820|PAN1B-like|Pan1b	hydroxysteroid (17-beta) dehydrogenase 13	protein-coding
common_peak2-28472-16-11-0.533301141546906-0.58239619684445	chr4	155150262	155150797	+	0	NA	Intergenic	(GA)n|Simple_repeat|Simple_repeat	-1859	NM_147776	246228	Mm.26515	NM_147776	ENSMUSG00000042116	Vwa1	4932416A11Rik|WARP	von Willebrand factor A domain containing 1	protein-coding
unique_peak2-38197-7-11--0.785871670422967-1.21681515183528	chr6	108444777	108445396	+	0	NA	intron (NM_010585, intron 52 of 61)	intron (NM_010585, intron 52 of 61)	5349	NR_106121	102465766		NR_106121		Mir7661	mmu-mir-7661	microRNA mir-7661	ncRNA
common_peak2-31513-43-59--0.124327410084816-0.331513058069911	chr8	107587583	107588695	+	0	NA	Intergenic	RMER16-int|LTR|ERVK	15640	NM_198672	382053	Mm.295534	NM_198672	ENSMUSG00000069922	Ces3a	Ces3|Ces31|Es31	carboxylesterase 3A	protein-coding
unique_peak2-37193-8-12--0.695217300193522-0.475924844171029	chr4	58552562	58553259	+	0	NA	intron (NM_010336, intron 1 of 3)	intron (NM_010336, intron 1 of 3)	13255	NM_172989	14745	Mm.4772	NM_010336	ENSMUSG00000038668	Lpar1	AI326300|Edg2|Gpcr26|Kdt2|lpA1|vzg-1	lysophosphatidic acid receptor 1	protein-coding
unique_peak1-4568-18-5-1.7279566505072-2.39372960542229	chr3	52630498	52631259	+	0	NA	Intergenic	Intergenic	87232	NR_038079	329639	Mm.131245	NR_038079		Gm2447	100039832|A530017F20	predicted gene 2447	ncRNA
common_peak2-30943-40-61--0.295220627635777-0.495169887621129	chr8	13695425	13697077	+	0	NA	Intergenic	Intergenic	-9638	NM_001101519	403185	Mm.252143	NM_001101519	ENSMUSG00000090336	4932443I19Rik	A230061C02Rik|Gm1106	RIKEN cDNA 4932443I19 gene	protein-coding
common_peak2-29240-16-23--0.466698858453094-0.497202060940027	chr5	139252283	139253168	+	0	NA	intron (NM_030565, intron 3 of 9)	intron (NM_030565, intron 3 of 9)	21690	NM_030565	80752	Mm.320355	NM_030565	ENSMUSG00000025854	Fam20c	C76981|DMP-4|DMP4|GEF-CK|mKIAA4081	family with sequence similarity 20, member C	protein-coding
unique_peak1-5492-12-3-1.64877598508764-2.36932189928148	chr5	134674812	134675424	+	0	NA	intron (NM_053266, intron 6 of 15)	intron (NM_053266, intron 6 of 15)	15210	NM_053266	114674	Mm.218744	NM_053266	ENSMUSG00000015942	Gtf2ird2	1700012P16Rik	GTF2I repeat domain containing 2	protein-coding
unique_peak1-601-12-6-0.841421063030034-1.58711810488664	chr10	20076273	20076861	+	0	NA	intron (NM_027930, intron 5 of 6)	intron (NM_027930, intron 5 of 6)	8942	NM_027930	71804	Mm.262151	NM_027930	ENSMUSG00000019992	Mtfr2	2610016C23Rik|4933412C16Rik|Dufd1|Fam54a	mitochondrial fission regulator 2	protein-coding
common_peak2-31984-11-10-0.0492619656143161-0.31137425193576	chr9	70079847	70080412	+	0	NA	intron (NM_181072, intron 1 of 27)	intron (NM_181072, intron 1 of 27)	24972	NM_181072	71602	Mm.249311	NM_181072	ENSMUSG00000032220	Myo1e	2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3	myosin IE	protein-coding
common_peak1-11930-51-49-0.431067635827849-0.910002444715788	chr17	71597904	71599529	+	0	NA	3' UTR (NM_022882, exon 20 of 20)	3' UTR (NM_022882, exon 20 of 20)	44722	NM_001164885	64898	Mm.227924	NM_022882	ENSMUSG00000024052	Lpin2	2610511G02Rik|AI481352|AW742896	lipin 2	protein-coding
common_peak2-29269-13-20--0.613845392140992-0.532159081577619	chr5	142628655	142629414	+	0	NA	intron (NM_177879, intron 35 of 44)	intron (NM_177879, intron 35 of 44)	-248417	NM_199068	17425	Mm.24214	NM_010812	ENSMUSG00000056493	Foxk1	A630048H08Rik|AI463295|ENSMUSG00000075577|Gm10868|Mnf	forkhead box K1	protein-coding
unique_peak1-612-13-7-0.778472030637769-0.817533494790411	chr10	22223631	22224484	+	0	NA	Intergenic	Intergenic	101438	NR_028580	100038752	Mm.392859	NR_028580	ENSMUSG00000096937	Gm10825	ENSMUSG00000075295	predicted gene 10825	ncRNA
unique_peak2-36265-7-25--1.9013488878429-2.63337704757512	chr2	59616600	59617769	+	0	NA	intron (NM_001290659, intron 6 of 25)	intron (NM_001290659, intron 6 of 25)	103479	NM_001159636	72137	Mm.288734	NM_028118	ENSMUSG00000026988	Wdsub1	1700048E19Rik|2610014F08Rik	WD repeat, SAM and U-box domain containing 1	protein-coding
unique_peak2-33508-8-17--1.16470258349474-1.02063122982878	chr11	73324050	73324649	+	0	NA	Intergenic	RMER3D-int|LTR|ERVK	6350	NM_146443	258435	Mm.377500	NM_146443	ENSMUSG00000095312	Olfr382	MOR135-14	olfactory receptor 382	protein-coding
common_peak2-32010-63-58-0.555669541708748-1.56901764734008	chr9	72132645	72133982	+	0	NA	intron (NM_146224, intron 1 of 21)	L1VL2|LINE|L1	10607	NM_146224	235469	Mm.242791	NM_146224	ENSMUSG00000038535	Zfp280d	A930005F02Rik|BC027163|Suhw4|ZNF634|Znf280d	zinc finger protein 280D	protein-coding
unique_peak2-39567-2-6--1.72480917832092-1.26211192963361	chr9	70943035	70943396	+	0	NA	Intergenic	L1Md_F|LINE|L1	67225	NM_001271843	64008	Mm.449427	NM_022026	ENSMUSG00000032204	Aqp9	1700020I22Rik|AI266899|AQP-9	aquaporin 9	protein-coding
unique_peak2-39343-3-4--0.73591118484664-0.864171920961574	chr9	56852148	56852556	+	0	NA	intron (NM_019651, intron 1 of 12)	intron (NM_019651, intron 1 of 12)	9577	NM_019651	56294	Mm.325643	NM_019651	ENSMUSG00000032290	Ptpn9	MEG2	protein tyrosine phosphatase, non-receptor type 9	protein-coding
common_peak2-30199-7-6--0.00826409175941478-0.97990265578305	chr7	56049621	56049879	+	0	NA	intron (NM_028031, intron 1 of 16)	Lx7|LINE|L1	5377	NM_028031	243983	Mm.279116	NM_028031	ENSMUSG00000030471	Zdhhc13	2410004E01Rik|C530010M18|HIP3RP|Hip14l|kojak|skc4	zinc finger, DHHC domain containing 13	protein-coding
unique_peak1-792-14-8-0.729291158915332-0.771068449301682	chr11	77790783	77791532	+	0	NA	intron (NM_001291225, intron 14 of 15)	intron (NM_001291225, intron 14 of 15)	-5161	NM_174852	268448	Mm.274329	NM_174852	ENSMUSG00000037791	Phf12	2410142K10Rik|F630045O13|PF1|mKIAA1523	PHD finger protein 12	protein-coding
common_peak1-17651-11-7-0.508693584251613-1.21681515183528	chr7	58398756	58399311	+	0	NA	Intergenic	Intergenic	-367366	NR_073508	233246	Mm.254431	NM_177694	ENSMUSG00000055489	Ano5	9330162L24|Gdd1|Tmem16e	anoctamin 5	protein-coding
unique_peak2-37221-7-22--1.72447112575882-2.07034318903805	chr4	88760075	88760789	+	0	NA	Intergenic	Intergenic	-22842	NM_024433	66902	Mm.28500	NM_024433	ENSMUSG00000062937	Mtap	1300019I21Rik|MSAP	methylthioadenosine phosphorylase	protein-coding
unique_peak2-38880-4-13--1.83081543591085-2.04196296489515	chr8	120487500	120488016	+	0	NA	Intergenic	Intergenic	-161929	NM_026758	68533	Mm.181836	NM_026758	ENSMUSG00000031843	Mphosph6	1110001M01Rik|AA536809|C86426	M phase phosphoprotein 6	protein-coding
common_peak2-29491-10-13--0.450939577048835-0.386243247519795	chr6	31217684	31218092	+	0	NA	intron (NR_040257, intron 2 of 7)	intron (NR_040257, intron 2 of 7)	47537	NR_040261	73652	Mm.441297	NR_040257	ENSMUSG00000087380	2210408F21Rik	-	RIKEN cDNA 2210408F21 gene	ncRNA
common_peak2-29871-17-6-1.41094141614743-1.84350559086818	chr6	108534446	108534844	+	0	NA	intron (NR_104577, intron 3 of 6)	B2_Mm2|SINE|B2	38516	NR_040757	75394	Mm.395061	NR_040757	ENSMUSG00000087341	0610040F04Rik	-	RIKEN cDNA 0610040F04 gene	ncRNA
unique_peak1-6974-10-2-1.77145284428761-2.09384600808989	chr8	119433179	119433676	+	0	NA	intron (NM_026844, intron 2 of 3)	intron (NM_026844, intron 2 of 3)	11909	NM_026844	66531	Mm.4011	NM_026844	ENSMUSG00000014633	Cmc2	1110046L09Rik|2310061C15Rik|DC13	COX assembly mitochondrial protein 2	protein-coding
common_peak1-17212-18-17-0.142994149786039-0.353907621462753	chr6	125354062	125354934	+	0	NA	Intergenic	Intergenic	-23976	NM_198604	213522	Mm.333396	NM_198604	ENSMUSG00000038167	Plekhg6	BC026778|Gm155	pleckstrin homology domain containing, family G (with RhoGef domain) member 6	protein-coding
common_peak1-9967-12-8-0.478850983645327-0.562038191119709	chr12	112941906	112942410	+	0	NA	Intergenic	Intergenic	9309	NM_027404	70369	Mm.44239	NM_027404	ENSMUSG00000049792	Bag5	1600025G07Rik|4930405J06Rik	BCL2-associated athanogene 5	protein-coding
common_peak2-23609-207-398--0.139173270104838-0.671461785221696	chr15	81584533	81586952	+	0	NA	intron (NM_001081016, intron 1 of 22)	intron (NM_001081016, intron 1 of 22)	10464	NM_001081016	20286	Mm.432075	NM_001081016	ENSMUSG00000022390	Zc3h7b	Gm627|Scrg3|Zc2h7b|mKIAA1031	zinc finger CCCH type containing 7B	protein-coding
common_peak2-23627-19-13-0.595332404604082-0.713635438203849	chr15	83338160	83338898	+	0	NA	intron (NM_178869, intron 1 of 11)	intron (NM_178869, intron 1 of 11)	2808	NM_178869	319953	Mm.235007	NM_178869	ENSMUSG00000022442	Ttll1	6330444E16Rik|AV014541	tubulin tyrosine ligase-like 1	protein-coding
common_peak1-16951-39-35-0.445836245476841-0.810079075897168	chr6	84270182	84271554	+	0	NA	Intergenic	Intergenic	102964	NR_046063	100038556	Mm.387783	NR_046063		Gm10445	ENSMUSG00000072956	predicted gene 10445	ncRNA
unique_peak2-39478-4-7--1.02346051385325-1.09384600808989	chr9	57817075	57817475	+	0	NA	Intergenic	MTE2a|LTR|MaLR	29333	NM_011352	20361	Mm.335187	NM_011352	ENSMUSG00000038264	Sema7a	2900057C09Rik|CDw108|H-Sema-L|M-Sema-L|Semal	sema domain, immunoglobulin domain (Ig), and GPI membrane anchor, (semaphorin) 7A	protein-coding
unique_peak1-54-9-1-2.18961340640422-2.31132995230379	chr1	31094936	31095478	+	0	NA	Intergenic	RLTR17|LTR|ERVK	-88607	NM_011200	19243	Mm.491181	NM_011200	ENSMUSG00000026064	Ptp4a1	AA415290|AU019864|C130021B01|Prl-1	protein tyrosine phosphatase 4a1	protein-coding
common_peak1-14332-14-8-0.729291158915332-0.771068449301682	chr2	164442016	164442571	+	0	NA	intron (NM_001012725, intron 2 of 3)	intron (NM_001012725, intron 2 of 3)	3093	NM_001012725	433502	Mm.376157	NM_001012725	ENSMUSG00000070531	Wfdc6b	WAP6b|Wfdc6	WAP four-disulfide core domain 6B	protein-coding
common_peak1-14871-31-46--0.329350180864514-0.513362016391488	chr3	95673804	95675226	+	0	NA	promoter-TSS (NM_078479)	promoter-TSS (NM_078479)	27	NM_078479	66292	Mm.24108	NM_078479	ENSMUSG00000054312	Mrps21	1810031B19Rik	mitochondrial ribosomal protein S21	protein-coding
common_peak2-25097-10-7-0.356415345008769-1.12966497611638	chr18	36525343	36525657	+	0	NA	intron (NM_001081365, intron 1 of 2)	intron (NM_001081365, intron 1 of 2)	17222	NM_001081365	66060	Mm.272527	NM_001081365		Cystm1	0610010O12Rik	cysteine-rich transmembrane module containing 1	protein-coding
unique_peak1-2459-14-1-2.89921616035764-3.91338994363176	chr15	103258434	103259023	+	0	NA	intron (NM_028797, intron 2 of 8)	intron (NM_028797, intron 2 of 8)	2130	NM_028797	74174	Mm.325325	NM_028797	ENSMUSG00000022487	Gtsf1	1700006H03Rik|Cue110	gametocyte specific factor 1	protein-coding
common_peak2-31091-35-38-0.145968039600255-0.368093376636814	chr8	25719929	25720692	+	0	NA	intron (NM_010084, intron 19 of 19)	MLT1A1|LTR|MaLR	-12886	NM_008324	15930	Mm.392	NM_008324	ENSMUSG00000031551	Ido1	Ido|Indo	indoleamine 2,3-dioxygenase 1	protein-coding
common_peak1-11276-36-44--0.0125320101619204-0.303469903643781	chr15	81872013	81873168	+	0	NA	exon (NM_011482, exon 3 of 3)	exon (NM_011482, exon 3 of 3)	5438	NM_011482	20826	Mm.299312	NM_011482	ENSMUSG00000063480	Nhp2l1	FA-1|Fta1|Ssfa1	NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	protein-coding
unique_peak2-34204-3-6--1.22133801201688-1.08602067057793	chr13	41358465	41358860	+	0	NA	intron (NM_001135577, intron 1 of 1)	intron (NM_001135577, intron 1 of 1)	13449	NM_001135577	108934	Mm.38578	NM_001135577	ENSMUSG00000091264	Smim13	2900036K02Rik	small integral membrane protein 13	protein-coding
common_peak1-10155-38-34-0.442169642353564-0.82261631811054	chr13	36730902	36732594	+	0	NA	Intergenic	B2_Mm2|SINE|B2	94598	NM_153529	68404	Mm.232930	NM_153529	ENSMUSG00000039114	Nrn1	0710008J23Rik|Cpg15|Nrn	neuritin 1	protein-coding
unique_peak1-5755-8-1-2.00522241794757-2.05605744720049	chr6	50686138	50686653	+	0	NA	Intergenic	Intergenic	-39719	NR_045984	319981	Mm.131454	NR_045984		C530044C16Rik	-	RIKEN cDNA C530044C16 gene	ncRNA
common_peak1-16595-97-191--0.400961429228874-1.67284480416139	chr5	149051074	149053160	+	0	NA	intron (NM_029920, intron 7 of 14)	intron (NM_029920, intron 7 of 14)	159363	NM_007513	11987	Mm.275489	NM_007513	ENSMUSG00000041313	Slc7a1	4831426K01Rik|AI447493|Atrc-1|Atrc1|Cat1|Rec-1|Rev-1|mCAT-1	solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	protein-coding
common_peak2-31772-12-11-0.0638134843664826-0.337263207250336	chr9	22156701	22157216	+	0	NA	intron (NM_028390, intron 17 of 23)	ORR1B2|LTR|MaLR	-21824	NR_033622	625603	Mm.37987	NR_033622		Gm6607	EG625603	40S ribosomal protein S20 pseudogene	pseudo
unique_peak2-36111-5-6--0.511735258063458-0.947717972411649	chr2	163299292	163299727	+	0	NA	TTS (NR_028122)	TTS (NR_028122)	-1144	NM_173397	228859	Mm.242917	NM_173397		Fitm2	AI414861|D930001I22Rik|Fit2	fat storage-inducing transmembrane protein 2	protein-coding
unique_peak2-34457-3-10--1.87341470859657-1.75805390616669	chr14	25827004	25827357	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	135547	NR_045718	75862	Mm.109191	NR_045718		4930572O13Rik	-	RIKEN cDNA 4930572O13 gene	ncRNA
common_peak2-25915-12-33--1.4386868561627-2.25377313481387	chr19	46352499	46353155	+	0	NA	intron (NM_178930, intron 29 of 39)	L1MD2|LINE|L1	-26400	NM_001177369	18034	Mm.102365	NM_019408	ENSMUSG00000025225	Nfkb2	NF-kappaB2|lyt|p49|p49/p100|p50B|p52	nuclear factor of kappa light polypeptide gene enhancer in B cells 2, p49/p100	protein-coding
unique_peak1-4153-11-1-2.50869358425161-2.83420869758413	chr2	101274375	101274869	+	0	NA	Intergenic	Intergenic	-190283	NM_009020	19374	Mm.4988	NM_009020	ENSMUSG00000032864	Rag2	Rag-2	recombination activating gene 2	protein-coding
unique_peak1-4428-9-4-0.867685311516858-1.36011389749466	chr2	168103619	168104114	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-9035	NM_001081134	241794	Mm.425102	NM_001081134	ENSMUSG00000074575	Kcng1	AW536275|OTTMUSG00000016048	potassium voltage-gated channel, subfamily G, member 1	protein-coding
common_peak2-26285-8-6-0.197867495889966-1.03789460276074	chr2	30896838	30897206	+	0	NA	intron (NM_001038700, intron 9 of 14)	intron (NM_001038700, intron 9 of 14)	54998	NM_001177650	14269	Mm.52297	NM_019406	ENSMUSG00000075415	Fnbp1	1110057E06Rik|2210010H06Rik|FBP1|Fbp17	formin binding protein 1	protein-coding
unique_peak1-1199-15-8-0.842239749113344-0.891319708951327	chr11	103383545	103384503	+	0	NA	Intergenic	Lx7|LINE|L1	92029	NM_001033434	380730	Mm.380214	NM_001033434	ENSMUSG00000034239	Gm884	LRRC37	predicted gene 884	protein-coding
common_peak2-24398-9-13--0.617741515653384-0.459837087125828	chr17	13759913	13760343	+	0	NA	Intergenic	Intergenic	-13168	NR_045437	72578	Mm.46549	NR_045436	ENSMUSG00000038347	2700054A10Rik	-	RIKEN cDNA 2700054A10 gene	ncRNA
common_peak1-17223-17-7-1.21829633820504-1.55050753388977	chr6	125591413	125592205	+	0	NA	intron (NM_011708, intron 27 of 51)	intron (NM_011708, intron 27 of 51)	-48628	NM_153589	243634	Mm.333398	NM_153589	ENSMUSG00000038115	Ano2	BC033409|Tmem16b	anoctamin 2	protein-coding
common_peak2-20823-5-10--1.16381195464315-1.33892459842472	chr10	128410249	128410769	+	0	NA	Intergenic	MTC|LTR|MaLR	-12465	NM_027853	71664	Mm.337232	NM_027853	ENSMUSG00000025347	Mettl7b	0610006F02Rik|AI266817	methyltransferase like 7B	protein-coding
unique_peak2-36249-5-6--0.511735258063458-0.947717972411649	chr2	48441100	48441492	+	0	NA	Intergenic	Intergenic	-228333	NM_007396	11480	Mm.314338	NM_007396	ENSMUSG00000052155	Acvr2a	ActrIIa|Acvr2|TactrII	activin receptor IIA	protein-coding
common_peak1-15028-21-26--0.185398236897233-0.318406410381916	chr3	121469006	121469859	+	0	NA	intron (NM_008991, intron 20 of 22)	intron (NM_008991, intron 20 of 22)	42977	NM_010171	14066	Mm.273188	NM_010171	ENSMUSG00000028128	F3	AA409063|CD142|Cf-3|Cf3|TF	coagulation factor III	protein-coding
common_peak1-15442-12-21--0.810655633549659-0.713635438203849	chr4	94978705	94979296	+	0	NA	Intergenic	Intergenic	-245198	NM_001113412	75578	Mm.276098	NM_029347	ENSMUSG00000028573	Fggy	2310009E04Rik	FGGY carbohydrate kinase domain containing	protein-coding
common_peak1-8563-17-24--0.425559851569687-0.427564438475253	chr10	94545146	94545718	+	0	NA	Intergenic	Intergenic	-138220	NM_018797	54712	Mm.256712	NM_018797	ENSMUSG00000074785	Plxnc1	2510048K12Rik|AW742158|CD232|Vespr	plexin C1	protein-coding
unique_peak2-33714-10-31--1.64358465499123-2.75133420124051	chr11	113208534	113209217	+	0	NA	intron (NM_027216, intron 6 of 9)	intron (NM_027216, intron 6 of 9)	-137892	NR_040276	319871	Mm.383743	NR_040276	ENSMUSG00000085421	4732490B19Rik	-	RIKEN cDNA 4732490B19 gene	ncRNA
unique_peak1-3076-11-4-1.18676548936425-1.68134727924692	chr18	20756961	20757505	+	0	NA	intron (NM_007883, intron 14 of 14)	intron (NM_007883, intron 14 of 14)	40616	NM_007883	13511	Mm.345891	NM_007883	ENSMUSG00000044393	Dsg2	AA408168|D18Ertd293e	desmoglein 2	protein-coding
unique_peak2-36778-5-6--0.511735258063458-0.947717972411649	chr3	69723649	69724068	+	0	NA	Intergenic	MERVL_2A-int|LTR|ERVL	-60042	NM_001286959	66183	Mm.45481	NM_133675	ENSMUSG00000043461	Sptssb	1110032A04Rik|ADMP|Sssptb	serine palmitoyltransferase, small subunit B	protein-coding
common_peak1-14250-61-62-0.405469406249424-0.963785458975815	chr2	154791007	154792277	+	0	NA	Intergenic	Intergenic	-47664	NM_015770	50518	Mm.315593	NM_015770	ENSMUSG00000027596	a	A<y>|ASIP|ASP|As	nonagouti	protein-coding
unique_peak1-716-9-9--0.132314688483142-1.03275496310833	chr10	89530901	89531400	+	0	NA	intron (NM_001128086, intron 4 of 24)	B3|SINE|B2	194896	NM_001128086	77531	Mm.440605	NM_181398	ENSMUSG00000058589	Anks1b	AIDA-1b|C030032C09Rik|E530015N03Rik|ENSMUSG00000078431|Gm10937|Gm1555	ankyrin repeat and sterile alpha motif domain containing 1B	protein-coding
common_peak2-26361-5-8--0.874305337448166-1.10484139239135	chr2	38533720	38534068	+	0	NA	Intergenic	Intergenic	-34468	NM_011187	19177	Mm.389251	NM_011187	ENSMUSG00000026750	Psmb7	AU020723|MC14	proteasome (prosome, macropain) subunit, beta type 7	protein-coding
unique_peak1-4165-8-3-1.00522241794757-1.39487600375387	chr2	108686139	108686674	+	0	NA	Intergenic	Intergenic	432041	NM_029790	76894	Mm.330451	NM_029790	ENSMUSG00000057234	Mettl15	0610027B03Rik|AI303697|AW049952|Mett5d1	methyltransferase like 15	protein-coding
common_peak1-17620-23-16-0.634304663258741-0.82304638657543	chr7	45601527	45602214	+	0	NA	Intergenic	Intergenic	918034	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak1-9095-32-25-0.578652301078568-0.97145127402441	chr11	70239335	70240399	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-6215	NM_001271360	216869	Mm.203747	NM_145429	ENSMUSG00000060216	Arrb2	AI326910|AW122872	arrestin, beta 2	protein-coding
common_peak2-23648-28-28-0.194978124693891-0.390124689062469	chr15	84280947	84281794	+	0	NA	Intergenic	Intergenic	-3843	NM_001163145	72301	Mm.275387	NM_001163145	ENSMUSG00000062760	1810041L15Rik	Kiaa1644	RIKEN cDNA 1810041L15 gene	protein-coding
unique_peak2-34529-5-7--0.704380336005853-1.01466476204226	chr14	54602970	54603507	+	0	NA	Intergenic	Intergenic	270366	NM_001113358	13135	Mm.319038	NM_010015	ENSMUSG00000022174	Dad1	AI323713	defender against cell death 1	protein-coding
common_peak1-13333-19-21--0.0567442919756109-0.301029995663971	chr19	43673793	43674799	+	0	NA	Intergenic	CpG	-12519	NM_008699	18089	Mm.56994	NM_008699	ENSMUSG00000044220	Nkx2-3	Nkx-2.3|Nkx2.3|tinman	NK2 homeobox 3	protein-coding
unique_peak2-38396-6-8--0.60452689106201-1.03789460276074	chr7	19457925	19458448	+	0	NA	Intergenic	Intergenic	-11853	NM_009402	21946	Mm.21855	NM_009402	ENSMUSG00000030413	Pglyrp1	PGRP|PGRP-S|Pglyrp|Tag7|Tasg7|Tnfsf3l	peptidoglycan recognition protein 1	protein-coding
unique_peak2-36317-7-10--0.660340788339108-1.12966497611638	chr2	79510550	79511227	+	0	NA	exon (NM_080558, exon 17 of 18)	exon (NM_080558, exon 17 of 18)	35306	NM_080558	70599	Mm.272881	NM_080558	ENSMUSG00000027007	Ssfa2	5730488C15Rik|CS-1|CS1|KRAP|SPAG13|mKIAA1927	sperm specific antigen 2	protein-coding
common_peak1-10365-15-23--0.5727977501655-0.575340103425218	chr13	91461428	91462176	+	0	NA	Intergenic	Intergenic	65888	NR_045161	320297	Mm.375866	NR_045161	ENSMUSG00000097182	A830009L08Rik	-	RIKEN cDNA A830009L08 gene	ncRNA
common_peak2-21103-14-17--0.270708841084668-0.328191099940267	chr11	52003486	52004162	+	0	NA	Intergenic	URR1B|DNA|MER1_type	23665	NM_207253	276865	Mm.377871	NM_207253	ENSMUSG00000060170	Olfr1371	GA_x6K02T2QP88-3214035-3214970|MOR256-58	olfactory receptor 1371	protein-coding
common_peak1-9696-12-9-0.326847890200276-0.459837087125828	chr12	21373385	21374016	+	0	NA	intron (NR_120376, intron 1 of 18)	intron (NR_120376, intron 1 of 18)	5793	NR_102380	11491	Mm.27681	NM_009615	ENSMUSG00000052593	Adam17	CD156b|Tace	a disintegrin and metallopeptidase domain 17	protein-coding
common_peak2-20132-10-18--0.891512168434816-0.804350088532826	chr1	166002891	166003544	+	0	NA	intron (NM_011346, intron 7 of 8)	intron (NM_011346, intron 7 of 8)	11010	NM_001164059	20343	Mm.1461	NM_011346	ENSMUSG00000026581	Sell	AI528707|CD62L|L-selectin|LECAM-1|Lnhr|Ly-22|Ly-m22|Lyam-1|Lyam1	selectin, lymphocyte	protein-coding
common_peak2-21543-4-10--1.48289213249054-1.5150158574804	chr11	95837880	95838362	+	0	NA	intron (NM_009951, intron 4 of 14)	RSINE1|SINE|B4	-13424	NR_037223	100526468		NR_037223	miRBase:MI0014025	Mir3063	mmu-mir-3063	microRNA 3063	ncRNA
common_peak2-26468-22-30--0.30691220529947-0.399869693390336	chr2	76674722	76675972	+	0	NA	intron (NM_011652, intron 152 of 312)	intron (NM_011652, intron 152 of 312)	145257	NM_028004	22138	Mm.373672	NM_011652	ENSMUSG00000051747	Ttn	1100001C23Rik|2310036G12Rik|2310057K23Rik|2310074I15Rik|AF006999|AV006427|D330041I19Rik|D830007G01Rik|L56|mdm|shru	titin	protein-coding
unique_peak1-3223-8-2-1.42025991722641-1.65811743852845	chr18	60652112	60652522	+	0	NA	intron (NM_134133, intron 1 of 1)	(GAAA)n|Simple_repeat|Simple_repeat	9320	NM_134133	106878	Mm.273197	NM_134133	ENSMUSG00000038059	Smim3	2010002N04Rik|AI195350|AW561905|Nid67|cI-41	small integral membrane protein 3	protein-coding
unique_peak2-37115-8-24--1.63863377182715-2.11898024768848	chr4	8394233	8395205	+	0	NA	Intergenic	Intergenic	-68072	NM_021518	59021	Mm.397471	NM_021518	ENSMUSG00000047187	Rab2a	9330148M11Rik|C80220|Rab2	RAB2A, member RAS oncogene family	protein-coding
unique_peak1-2565-9-5-0.604650905683064-1.21398586181642	chr16	25405142	25405658	+	0	NA	intron (NM_175165, intron 4 of 5)	B4A|SINE|B4	118497	NM_175165	71338	Mm.126851	NM_175165	ENSMUSG00000048399	Tprg	5430420C16Rik|Tprg1	transformation related protein 63 regulated	protein-coding
common_peak2-25089-11-10-0.0492619656143161-0.31137425193576	chr18	36391613	36392090	+	0	NA	Intergenic	RMER2|LTR|ERV1	-35037	NM_001167891	100042150	Mm.380390	NM_001167891	ENSMUSG00000060275	Nrg2	Don1|NTAK	neuregulin 2	protein-coding
common_peak2-21117-10-9-0.0344872501214071-1.05503135781948	chr11	53307630	53308083	+	0	NA	Intergenic	Intergenic	-14159	NM_183173	237761	Mm.145208	NM_183173	ENSMUSG00000044352	Sowaha	A830006N08Rik|Ankrd43	sosondowah ankyrin repeat domain family member A	protein-coding
common_peak2-28901-4-7--1.02346051385325-1.09384600808989	chr5	91401068	91401595	+	0	NA	intron (NM_026788, intron 5 of 7)	intron (NM_026788, intron 5 of 7)	41109	NM_026788	665563	Mm.153030	NM_026788	ENSMUSG00000029376	Mthfd2l	1110019K23Rik|C630010D07Rik	methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2-like	protein-coding
unique_peak1-4455-8-0-3.00522241794757-2.70926996097583	chr2	173691683	173692204	+	0	NA	Intergenic	MusHAL1|LINE|L1	128871	NM_019806	56491	Mm.260456	NM_019806	ENSMUSG00000054455	Vapb	AI225786|AI840687|AI848259|D2Abb2e|R75548|VAP33b|Vamp33b	vesicle-associated membrane protein, associated protein B and C	protein-coding
common_peak2-27184-20-35--0.681850216851119-0.950553505527076	chr3	36449510	36450334	+	0	NA	Intergenic	B3|SINE|B2	-1606	NM_019393	50911	Mm.116711	NM_019393	ENSMUSG00000027714	Exosc9	PM/Scl-75|Pmscl1|RRP45|p5|p6	exosome component 9	protein-coding
common_peak1-13517-53-38-0.85557079355368-2.5049306780031	chr2	119896479	119898145	+	0	NA	Intergenic	Intergenic	38143	NM_145378	211429	Mm.41467	NM_145378		Pla2g4b	A030011C02Rik|Gm1013|cPLA2-beta	phospholipase A2, group IVB (cytosolic)	protein-coding
common_peak1-10503-34-33-0.294605685750927-0.53611512876719	chr14	57998751	57999636	+	0	NA	intron (NM_030004, intron 2 of 7)	intron (NM_030004, intron 2 of 7)	18127	NM_030004	68631	Mm.25539	NM_030004	ENSMUSG00000021947	Cryl1	1110025H08Rik|A230106J09Rik|C85932|gul3dh	crystallin, lambda 1	protein-coding
common_peak1-9492-22-19-0.325356010200042-0.479250674391597	chr11	108306948	108307854	+	0	NA	intron (NM_029606, intron 5 of 27)	MER74B|LTR|ERVL	20821	NM_029606	76380	Mm.344071	NM_029586	ENSMUSG00000020728	Cep112	1700001M19Rik|1700029K01Rik|8430407H02Rik|AV043680|AV207351|Ccdc46|Macoco	centrosomal protein 112	protein-coding
common_peak2-29813-34-22-0.858506570944253-1.68120055799038	chr6	91207724	91208429	+	0	NA	intron (NM_001081437, intron 8 of 16)	MER5A|DNA|MER1_type	45318	NM_007992	14115	Mm.249146	NM_007992	ENSMUSG00000064080	Fbln2	5730577E14Rik|FIBL-2	fibulin 2	protein-coding
common_peak2-27138-11-6-0.701338662194009-1.32595962126035	chr3	27617324	27617807	+	0	NA	Intergenic	ID_B1|SINE|B4	-8204	NM_173182	72007	Mm.38832	NM_173182	ENSMUSG00000039286	Fndc3b	1600019O04Rik|AW550168|Fad104|mKIAA4164	fibronectin type III domain containing 3B	protein-coding
common_peak2-29051-10-9-0.0344872501214071-1.05503135781948	chr5	115543403	115543932	+	0	NA	intron (NM_029012, intron 8 of 10)	intron (NM_029012, intron 8 of 10)	14304	NM_001271591	100502825	Mm.361657	NM_001271590		Gm13826	OTTMUSG00000014624	predicted gene 13826	protein-coding
unique_peak2-36046-7-13--1.00826409175941-0.697979855752659	chr19	45548684	45549093	+	0	NA	intron (NM_001286466, intron 4 of 13)	intron (NM_001286466, intron 4 of 13)	86145	NM_020032	56626	Mm.46509	NM_020032	ENSMUSG00000025218	Poll	1110003P06Rik|AV007317	polymerase (DNA directed), lambda	protein-coding
unique_peak1-3120-8-1-2.00522241794757-2.05605744720049	chr18	35027639	35028125	+	0	NA	Intergenic	B3|SINE|B2	7021	NM_007913	13653	Mm.181959	NM_007913		Egr1	A530045N19Rik|ETR103|Egr-1|Krox-1|Krox-24|Krox24|NGF1-A|NGFI-A|NGFIA|TIS8|Zenk|Zfp-6|Zif268|egr	early growth response 1	protein-coding
common_peak2-23537-9-7-0.18961340640422-1.05908390183068	chr15	77907264	77907680	+	0	NA	intron (NM_007583, intron 1 of 3)	intron (NM_007583, intron 1 of 3)	42238	NM_007583	12300	Mm.277338	NM_007583		Cacng2	AW060990|B230105C07Rik|B930041E13Rik|stargazer|stargazin|stg|wag|waggler	calcium channel, voltage-dependent, gamma subunit 2	protein-coding
common_peak2-20859-16-21--0.341167976369236-0.392630012299441	chr11	85311240	85311870	+	0	NA	intron (NM_001166643, intron 14 of 23)	intron (NM_001166643, intron 14 of 23)	144889	NM_001166643	192197	Mm.287663	NM_138681	ENSMUSG00000059439	Bcas3	1500019F07Rik|2610028P08Rik|AU021018|BC028339|K20D4|rudhira	breast carcinoma amplified sequence 3	protein-coding
common_peak2-30532-11-7-0.508693584251613-1.21681515183528	chr7	67222536	67223037	+	0	NA	intron (NM_001082961, intron 1 of 10)	intron (NM_001082961, intron 1 of 10)	19708	NM_001082961	20646	Mm.274995	NM_013670	ENSMUSG00000000948	Snrpn	2410045I01Rik|HCERN3|Peg4|Pwcr1|SMN	small nuclear ribonucleoprotein N	protein-coding
common_peak1-12308-37-27-0.718638149428215-1.38733277998641	chr17	46876509	46878070	+	0	NA	intron (NM_028065, intron 3 of 5)	MTA_Mm-int|LTR|MaLR	-11175	NM_010321	14711	Mm.29395	NM_010321	ENSMUSG00000002769	Gnmt	-	glycine N-methyltransferase	protein-coding
unique_peak1-5073-8-7-0.00522241794757061-1.00793137938329	chr4	140537152	140537663	+	0	NA	Intergenic	MTC|LTR|MaLR	-5381	NM_029097	74772	Mm.205625	NM_029097	ENSMUSG00000036622	Atp13a2	1110012E06Rik|AA589443	ATPase type 13A2	protein-coding
common_peak2-20952-41-42-0.274883950146562-0.532475415427916	chr11	16507485	16508630	+	0	NA	Intergenic	RLTR13D6|LTR|ERVK	-99570	NM_001109971	20335	Mm.325350	NM_011343	ENSMUSG00000078974	Sec61g	-	SEC61, gamma subunit	protein-coding
unique_peak2-36482-1-6--2.43441193227435-1.56314192529759	chr2	150904809	150905246	+	0	NA	Intergenic	L1Md_A|LINE|L1	13059	NM_001097977	433486	Mm.422661	NM_001097977	ENSMUSG00000079006	Gm14151	OTTMUSG00000015806	predicted gene 14151	protein-coding
unique_peak2-34118-5-14--1.61127093161437-1.95509489018123	chr13	21754066	21754654	+	0	NA	Intergenic	Intergenic	-3170	NM_146541	258534	Mm.271446	NM_146541	ENSMUSG00000049737	Olfr1361	MOR256-12	olfactory receptor 1361	protein-coding
common_peak1-10280-63-84-0.0289216549328879-0.312459384164289	chr13	59769061	59770715	+	0	NA	intron (NM_001035122, intron 1 of 9)	MTD|LTR|MaLR	7257	NM_001035122	105348	Mm.171335	NM_027307	ENSMUSG00000021556	Golm1	2310001L02Rik|AW125446|D030064E01Rik|GP73|Golph2|PSEC0257	golgi membrane protein 1	protein-coding
common_peak1-8106-73-72-0.502570447545204-1.49979460444319	chr1	182340645	182341967	+	0	NA	intron (NM_001081175, intron 2 of 7)	intron (NM_001081175, intron 2 of 7)	72329	NM_001081227	381310	Mm.44791	NM_001081227	ENSMUSG00000053963	6330403A02Rik	ENSMUSG00000056615|Gm10001|R75555	RIKEN cDNA 6330403A02 gene	protein-coding
unique_peak1-1445-13-7-0.778472030637769-0.817533494790411	chr12	101766779	101767456	+	0	NA	Intergenic	Intergenic	-8085	NM_001033213	104718	Mm.295441	NM_001033213	ENSMUSG00000033530	Ttc7b	AA408451|Ttc7l1	tetratricopeptide repeat domain 7B	protein-coding
common_peak1-7796-37-54--0.255366642038841-0.440152849854807	chr1	106713612	106715043	+	0	NA	intron (NM_011800, intron 1 of 11)	intron (NM_011800, intron 1 of 11)	48931	NM_011800	23836	Mm.103640	NM_011800	ENSMUSG00000050840	Cdh20	Cdh7	cadherin 20	protein-coding
common_peak1-15293-11-12--0.191746133889479-0.310474156842889	chr4	41755320	41755917	+	0	NA	Intergenic	Intergenic	-7676	NR_033506	100042539	Mm.418556	NR_033506		Gm3893	-	predicted gene 3893	ncRNA
unique_peak1-3271-8-3-1.00522241794757-1.39487600375387	chr18	70140879	70141359	+	0	NA	3' UTR (NM_001082553, exon 7 of 7)	3' UTR (NM_001082553, exon 7 of 7)	55906	NM_201362	381175	Mm.266831	NM_201362	ENSMUSG00000038903	Ccdc68	BC046343	coiled-coil domain containing 68	protein-coding
common_peak2-30083-6-7--0.434601889619698-0.97990265578305	chr6	134672023	134672493	+	0	NA	intron (NM_001048054, intron 5 of 6)	intron (NM_001048054, intron 5 of 6)	70388	NM_130447	70686	Mm.491182	NM_130447	ENSMUSG00000030203	Dusp16	3830417M17Rik|AW558566|D6Ertd213e|MKP-7|MKP7|Mkpm	dual specificity phosphatase 16	protein-coding
unique_peak1-7424-10-6-0.549060422951165-1.21398586181642	chrX	155194274	155194823	+	0	NA	Intergenic	Intergenic	-499166	NM_148945	110651	Mm.328476	NM_148945	ENSMUSG00000031309	Rps6ka3	C130006E23|MAPKAPK-1b|MPK-9|Rsk2|S6K-alpha3|p90RSK3|pp90RSK2	ribosomal protein S6 kinase polypeptide 3	protein-coding
unique_peak1-6194-18-6-1.50556422917075-2.02801025126771	chr6	147954610	147955332	+	0	NA	Intergenic	L1MC|LINE|L1	-40967	NM_178797	330450	Mm.475174	NM_178797	ENSMUSG00000030303	Far2	A230046P18|AW048109|BC055759|Mlstd1	fatty acyl CoA reductase 2	protein-coding
common_peak2-31443-11-9-0.186765489364251-0.344532117358383	chr8	104386143	104386625	+	0	NA	Intergenic	L1_Mus3|LINE|L1	922627	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
unique_peak2-39767-4-14--1.93035110946177-2.23384849113406	chrX	7318564	7319204	+	0	NA	promoter-TSS (NM_207202)	promoter-TSS (NM_207202)	-434	NM_207202	54648	Mm.63342	NM_207202	ENSMUSG00000031150	Ccdc120	AA030924|DXImx50e|Jm11|Sfc25	coiled-coil domain containing 120	protein-coding
common_peak2-30282-17-17-0.0483713367627256-0.325169893479371	chr7	18840007	18840755	+	0	NA	intron (NM_153749, intron 1 of 4)	(AGGGGG)n|Simple_repeat|Simple_repeat	9685	NM_153749	266815	Mm.106769	NM_153749	ENSMUSG00000054005	Mill1	5530400I18Rik	MHC I like leukocyte 1	protein-coding
common_peak1-12761-14-9-0.577288065470282-0.630231561310125	chr18	60637810	60638436	+	0	NA	intron (NM_134133, intron 1 of 1)	L1_Mur3|LINE|L1	23514	NM_134133	106878	Mm.273197	NM_134133	ENSMUSG00000038059	Smim3	2010002N04Rik|AI195350|AW561905|Nid67|cI-41	small integral membrane protein 3	protein-coding
common_peak2-27276-12-12--0.0516637330534535-0.309718203022949	chr3	57410023	57410442	+	0	NA	Intergenic	Intergenic	-30400	NM_001168281	97064	Mm.405029	NM_133784	ENSMUSG00000027803	Wwtr1	2310058J06Rik|2610021I22Rik|C78399|Taz	WW domain containing transcription regulator 1	protein-coding
unique_peak2-35392-4-5--0.608423014574403-0.909929411522249	chr17	31422637	31422986	+	0	NA	Intergenic	Intergenic	-8510	NM_025290	22092	Mm.12743	NM_025290	ENSMUSG00000024033	Rsph1	MCA|Tsga2	radial spoke head 1 homolog (Chlamydomonas)	protein-coding
unique_peak1-6707-9-5-0.604650905683064-1.21398586181642	chr8	34762176	34762665	+	0	NA	Intergenic	Intergenic	-1290	NM_010344	14782	Mm.283573	NM_010344	ENSMUSG00000031584	Gsr	AI325518|D8Ertd238e|Gr-1|Gr1	glutathione reductase	protein-coding
common_peak2-27128-33-30-0.377141252138654-0.612304185853042	chr3	19706242	19707348	+	0	NA	Intergenic	Lx3C|LINE|L1	-88076	NR_027985	70808	Mm.427103	NR_027985		4632415L05Rik	AI662792	RRS1 ribosome biogenesis regulator homolog pseudogene	pseudo
common_peak1-16109-40-59--0.247914912857421-0.427481819178421	chr5	65491436	65492858	+	0	NA	Intergenic	Intergenic	-30323	NM_175174	71778	Mm.10281	NM_175174	ENSMUSG00000054920	Klhl5	1300013C10Rik	kelch-like 5	protein-coding
common_peak1-11879-151-227-0.11925089783601-0.502699791983919	chr16	94569600	94571321	+	0	NA	Intergenic	B4|SINE|B4	20431	NM_133229	170765	Mm.42604	NM_133229	ENSMUSG00000022941	Ripply3	Dscr6	ripply3 homolog (zebrafish)	protein-coding
common_peak2-21757-56-62-0.258315901939326-0.569301204470908	chr11	116023279	116024647	+	0	NA	intron (NM_172571, intron 5 of 30)	intron (NM_172571, intron 5 of 30)	5529	NM_172571	217335	Mm.35241	NM_172571	ENSMUSG00000020776	Fbf1	1110033G01Rik|5930413D20|mKIAA1863	Fas (TNFRSF6) binding factor 1	protein-coding
common_peak1-18553-9-3-1.18961340640422-1.57096726280955	chr8	104376537	104376970	+	0	NA	Intergenic	Intergenic	932258	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
common_peak1-11364-24-29--0.113680692840802-0.304839791830752	chr15	93274442	93275379	+	0	NA	intron (NM_001083114, intron 4 of 7)	intron (NM_001083114, intron 4 of 7)	46015	NM_001285863	223828	Mm.74208	NM_146062	ENSMUSG00000036167	Pphln1	CR|HSPC206|HSPC232	periphilin 1	protein-coding
common_peak2-29735-37-50--0.146432270485676-0.337231681760967	chr6	85451493	85452997	+	0	NA	intron (NM_001001160, intron 1 of 13)	intron (NM_001001160, intron 1 of 13)	743	NM_001001160	330369	Mm.38777	NM_001001160	ENSMUSG00000047013	Fbxo41	9630017H13|D6Ertd538e	F-box protein 41	protein-coding
common_peak2-28706-26-19-0.6059709972711-0.841847921495509	chr5	34573713	34574444	+	0	NA	intron (NM_001015039, intron 6 of 12)	intron (NM_001015039, intron 6 of 12)	-43719	NM_010753	17122	Mm.259260	NM_010753	ENSMUSG00000037235	Mxd4	2810410A03Rik|Mad4|bHLHc12	Max dimerization protein 4	protein-coding
unique_peak1-5925-20-8-1.31814978314888-1.77631109801764	chr6	89411338	89412251	+	0	NA	intron (NM_001167736, intron 4 of 6)	intron (NM_001167736, intron 4 of 6)	-99187	NM_008881	18844	Mm.3789	NM_008881	ENSMUSG00000030084	Plxna1	2600013D04Rik|NOV|PlexA1|Plxn1|mKIAA4053	plexin A1	protein-coding
common_peak2-21128-8-10--0.454209200689727-1.078512453669	chr11	54029036	54029511	+	0	NA	Intergenic	URR1B|DNA|MER1_type	-2483	NR_045506	71056	Mm.56332	NR_045506	ENSMUSG00000086209	4933405E24Rik	-	RIKEN cDNA 4933405E24 gene	ncRNA
common_peak2-24949-11-5-0.923731083530457-1.477227296591	chr18	42057616	42058060	+	0	NA	intron (NM_029942, intron 5 of 6)	intron (NM_029942, intron 5 of 6)	53010	NM_029942	77619	Mm.30649	NM_029942	ENSMUSG00000056671	Prelid2	1700003A01Rik|C330008K14Rik	PRELI domain containing 2	protein-coding
common_peak1-18380-28-32-0.00856500046300912-0.30437085424443	chr8	70695099	70696313	+	0	NA	Intergenic	RMER19A|LTR|ERVK	-104721	NM_028182	72281	Mm.40974	NM_028182	ENSMUSG00000053886	Sh2d4a	2210402M20Rik|SH2A	SH2 domain containing 4A	protein-coding
common_peak2-24075-13-13--0.0288828914198356-0.309074325783021	chr16	30776590	30777152	+	0	NA	Intergenic	Intergenic	177062	NM_177632	224093	Mm.28244	NM_177632	ENSMUSG00000046546	Fam43a	Tuf1	family with sequence similarity 43, member A	protein-coding
unique_peak1-4853-11-5-0.923731083530457-1.477227296591	chr3	158464508	158465156	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-239647	NM_001081358	242274	Mm.132162	NM_001081358	ENSMUSG00000028176	Lrrc7	AK122498|densin|mKIAA1365	leucine rich repeat containing 7	protein-coding
common_peak2-24566-16-13-0.310908720210457-0.417187467413082	chr17	29427899	29428662	+	0	NA	intron (NM_030561, intron 4 of 8)	intron (NM_030561, intron 4 of 8)	22547	NM_030561	80748	Mm.290116	NM_030561	ENSMUSG00000052712	BC004004	2400006G15Rik	cDNA sequence BC004004	protein-coding
unique_peak2-32963-5-8--0.874305337448166-1.10484139239135	chr10	44529423	44529942	+	0	NA	Intergenic	RMER16-int|LTR|ERVK	-257338	NM_011156	19072	Mm.37294	NM_011156	ENSMUSG00000019849	Prep	AI047692|AI450383|D10Wsu136e|PEP|Pop	prolyl endopeptidase	protein-coding
common_peak2-24965-5-6--0.511735258063458-0.947717972411649	chr18	5427297	5427650	+	0	NA	Intergenic	Intergenic	-93036	NM_178722	240186	Mm.118257	NM_178722	ENSMUSG00000050945	Zfp438	9430031G09|9430091M14Rik|B830013J05Rik	zinc finger protein 438	protein-coding
common_peak2-26077-96-125-0.188771290855412-0.592685996350274	chr2	112492479	112493639	+	0	NA	exon (NM_177652, exon 89 of 104)	exon (NM_177652, exon 89 of 104)	93220	NM_001165935	74268	Mm.315125	NM_028844		Aven	1700013A01Rik|1700056A21Rik|mAven-L|mAven-S	apoptosis, caspase activation inhibitor	protein-coding
common_peak1-7494-13-8-0.608547029195456-0.660903317613904	chr1	10256677	10257243	+	0	NA	Intergenic	RLTR14|LTR|ERV1	-34209	NM_001102430	211673	Mm.229141	NM_001102430	ENSMUSG00000067851	Arfgef1	ARFGEP1|BIG1|D130059B05Rik|D730028O18Rik|P200	ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited)	protein-coding
common_peak2-31721-33-63--0.668662437474471-1.42573967311544	chr9	7183846	7185351	+	0	NA	promoter-TSS (NM_029775)	promoter-TSS (NM_029775)	32	NM_029775	76863	Mm.27293	NM_029775	ENSMUSG00000032002	Dcun1d5	3110001A18Rik|4833420K19Rik|AW060460|D430047L21Rik	DCN1, defective in cullin neddylation 1, domain containing 5 (S. cerevisiae)	protein-coding
common_peak1-13129-12-15--0.351224014912361-0.332077462497413	chr19	9075677	9076214	+	0	NA	intron (NR_104460, intron 4 of 6)	intron (NR_104460, intron 4 of 6)	12171	NM_001286518	66395	Mm.203866	NM_009643	ENSMUSG00000069833	Ahnak	DY6	AHNAK nucleoprotein (desmoyokin)	protein-coding
common_peak2-31783-12-14--0.25811461052088-0.309074325783021	chr9	28289622	28290402	+	0	NA	intron (NM_177906, intron 2 of 7)	intron (NM_177906, intron 2 of 7)	691158	NM_177906	330908	Mm.379474	NM_177906	ENSMUSG00000062257	Opcml	2900075O15Rik|3732419F12|AI844366|B930023M13Rik|C230027C17|Gm181|Obcam	opioid binding protein/cell adhesion molecule-like	protein-coding
common_peak2-19829-21-14-0.662598669657717-0.879255460030357	chr1	89568591	89569433	+	0	NA	intron (NR_122078, intron 5 of 27)	B3A|SINE|B2	52125	NM_001110193	16331	Mm.15105	NM_010566	ENSMUSG00000026288	Inpp5d	SHIP|SHIP-1|SHIP1|SIP-145|p150Ship|s-SHIP	inositol polyphosphate-5-phosphatase D	protein-coding
common_peak1-15739-11-9-0.186765489364251-0.344532117358383	chr4	148448474	148448995	+	0	NA	intron (NM_019781, intron 2 of 8)	intron (NM_019781, intron 2 of 8)	25187	NM_019781	56273	Mm.184172	NM_019781	ENSMUSG00000028975	Pex14	Pex14p|R75137	peroxisomal biogenesis factor 14	protein-coding
common_peak1-15062-9-7-0.18961340640422-1.05908390183068	chr3	123385378	123385871	+	0	NA	intron (NR_121616, intron 1 of 13)	RCHARR1|DNA|MER1_type	8146	NR_121616	83398	Mm.443908	NM_031186	ENSMUSG00000027977	Ndst3	4921531K01Rik|4930511P15Rik|N-HSST 3|NDST-3	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	protein-coding
common_peak2-22064-8-6-0.197867495889966-1.03789460276074	chr12	72084643	72085057	+	0	NA	intron (NM_011184, intron 3 of 10)	intron (NM_011184, intron 3 of 10)	9240	NM_011184	19167	Mm.296338	NM_011184		Psma3	Lmpc8	proteasome (prosome, macropain) subunit, alpha type 3	protein-coding
unique_peak1-5447-16-6-1.31090872021046-1.49151883326344	chr5	118446653	118447502	+	0	NA	intron (NM_145564, intron 9 of 11)	intron (NM_145564, intron 9 of 11)	20298	NM_145564	231670	Mm.21912	NM_145564	ENSMUSG00000032898	Fbxo21	2810425J22Rik|AU016673|mKIAA0875	F-box protein 21	protein-coding
common_peak2-26251-77-65-0.740132460197544-2.84218426594949	chr2	30048524	30049568	+	0	NA	intron (NM_172404, intron 3 of 13)	B4|SINE|B4	12173	NM_172404	70266	Mm.216089	NM_172404	ENSMUSG00000039648	Ccbl1	2010009K05Rik|AI182306|Gtk|Kat1|KatI	cysteine conjugate-beta lyase 1	protein-coding
unique_peak2-38384-3-11--1.99894559068043-1.95434855131066	chr7	17027438	17027958	+	0	NA	Intergenic	(TTGG)n|Simple_repeat|Simple_repeat	-10430	NM_026938	69094	Mm.29633	NM_026938	ENSMUSG00000019158	Tmem160	1810008O21Rik	transmembrane protein 160	protein-coding
unique_peak2-33288-6-10--0.894033508256995-1.21398586181642	chr11	73318106	73318723	+	0	NA	Intergenic	Intergenic	12285	NM_146443	258435	Mm.377500	NM_146443	ENSMUSG00000095312	Olfr382	MOR135-14	olfactory receptor 382	protein-coding
common_peak1-10054-16-11-0.533301141546906-0.58239619684445	chr13	20181878	20182755	+	0	NA	promoter-TSS (NM_080288)	promoter-TSS (NM_080288)	-60	NM_080288	140580	Mm.342392	NM_080288	ENSMUSG00000041112	Elmo1	6330578D22Rik|C230095H21Rik|CED-12	engulfment and cell motility 1	protein-coding
unique_peak2-34782-7-7--0.200909169701811-0.97990265578305	chr15	61395110	61395491	+	0	NA	Intergenic	L1Md_F2|LINE|L1	210706	NR_040350	432956	Mm.404918	NR_040350		D030024E09Rik	-	RIKEN cDNA D030024E09 gene	ncRNA
unique_peak1-4169-26-10-1.46846747352116-2.57346781069461	chr2	109650102	109651432	+	0	NA	Intergenic	Intergenic	-80268	NM_011699	22343	Mm.235300	NM_011699	ENSMUSG00000027162	Lin7c	9130007B12Rik|AI303698|AU019331|AW125731|D2Ertd520e|LIN-7-C|LIN-7C|MALS-3|Veli3	lin-7 homolog C (C. elegans)	protein-coding
unique_peak2-34229-3-11--1.99894559068043-1.95434855131066	chr13	51845701	51846199	+	0	NA	intron (NM_001281880, intron 2 of 16)	intron (NM_001281880, intron 2 of 16)	43166	NM_001281880	20354	Mm.33903	NM_013660	ENSMUSG00000021451	Sema4d	CD100|Semacl2|Semaj|Semcl2|coll-4	sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D	protein-coding
unique_peak2-38077-2-5--1.50241675698448-1.08602067057793	chr6	50418366	50418781	+	0	NA	Intergenic	RSINE1|SINE|B4	-12404	NM_001163645	71720	Mm.44153	NM_027881	ENSMUSG00000029822	Osbpl3	1200014M06Rik|6720421I08Rik|A530055M08|ORP3|OSBP3	oxysterol binding protein-like 3	protein-coding
common_peak1-9612-56-57-0.377614830311671-0.835692031846851	chr11	120672731	120674243	+	0	NA	exon (NM_007988, exon 29 of 43)	exon (NM_007988, exon 29 of 43)	12374	NM_007988	14104	Mm.236443	NM_007988	ENSMUSG00000025153	Fasn	A630082H08Rik|FAS	fatty acid synthase	protein-coding
common_peak1-11576-45-34-0.731075008399905-1.67641628704619	chr16	13902286	13903531	+	0	NA	promoter-TSS (NM_001289562)	promoter-TSS (NM_001289562)	330	NM_001039533	94184	Mm.171484	NM_053181	ENSMUSG00000022680	Pdxdc1	2210010A19Rik|AA415817|Kiaa0251-hp	pyridoxal-dependent decarboxylase domain containing 1	protein-coding
unique_peak1-466-11-3-1.50869358425161-1.95434855131066	chr1	171375432	171376140	+	0	NA	Intergenic	Intergenic	85809	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
common_peak2-21182-96-109-0.384691500830669-1.35581417841322	chr11	60104919	60107323	+	0	NA	intron (NM_153080, intron 1 of 14)	intron (NM_153080, intron 1 of 14)	60286	NM_153080	216810	Mm.218875	NM_153080	ENSMUSG00000000538	Tom1l2	2900016I08Rik|A730055F12Rik|AU042072|Srebf1	target of myb1-like 2 (chicken)	protein-coding
common_peak1-16146-34-12-1.68162880886017-4.13403188036199	chr5	74143055	74144221	+	0	NA	Intergenic	Intergenic	101019	NM_178387	73472	Mm.87067	NM_178387	ENSMUSG00000029155	Spata18	1700067I02Rik	spermatogenesis associated 18	protein-coding
unique_peak2-39007-2-7--1.91745425626332-1.45399745587252	chr8	47673859	47674282	+	0	NA	intron (NM_001001184, intron 9 of 14)	B1_Mus2|SINE|Alu	28484	NM_001001184	408022	Mm.217385	NM_001001184	ENSMUSG00000038225	Primpol	BC065112|Ccdc111	primase and polymerase (DNA-directed)	protein-coding
common_peak2-27959-29-45--0.411271875441902-0.573175361577109	chr4	40702754	40704660	+	0	NA	intron (NM_021535, intron 1 of 11)	B1_Mus2|SINE|Alu	1211	NM_021535	74255	Mm.289929	NM_021535		Smu1	2600001O03Rik|2610203K23Rik|AB044414|AI845086|AW556129|Bwd	smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)	protein-coding
common_peak1-16672-14-6-1.09186123830004-1.16633110333236	chr6	5255736	5256229	+	0	NA	Intergenic	Intergenic	-7609	NM_183308	330260	Mm.126984	NM_183308		Pon2	6330405I24Rik|AI481612	paraoxonase 2	protein-coding
common_peak2-24428-10-10--0.103016273628528-0.301029995663987	chr17	17909747	17910225	+	0	NA	Intergenic	RMER1B|Other|Other	-57166	NR_029536	387230		NR_029536		Mir99b	Mirn99b|mmu-mir-99b	microRNA 99b	ncRNA
common_peak1-16106-7-23--1.78587167042297-2.25371873249797	chr5	65436158	65436624	+	0	NA	Intergenic	Intergenic	74834	NR_030577	100124451		NR_030577	miRBase:MI0005518	Mir574	Mirn574|mmu-mir-574	microRNA 574	ncRNA
unique_peak1-6092-9-1-2.18961340640422-2.31132995230379	chr6	124813562	124814047	+	0	NA	TTS (NM_013488)	TTS (NM_013488)	131	NM_013533	14788	Mm.2514	NM_013533	ENSMUSG00000038390	Gpr162	A-2|BC031437|Grca	G protein-coupled receptor 162	protein-coding
common_peak1-11980-20-32--0.55631933476726-0.705485015404196	chr17	8310953	8311721	+	0	NA	Intergenic	Intergenic	-17244	NM_001033442	381059	Mm.490353	NM_001033442		Gm1604b	ENSMUSG00000073470|Gm1604	predicted gene 1604b	protein-coding
common_peak2-20653-15-31--0.987835249444344-1.35897270024963	chr10	81996722	81997402	+	0	NA	Intergenic	L1Md_A|LINE|L1	-41699	NM_001255990	432480	Mm.280394	NM_001255990	ENSMUSG00000094186	Gm1553	Lcrn	predicted gene 1553	protein-coding
common_peak1-15030-51-46-0.520334973924935-1.1534274303752	chr3	121576752	121578072	+	0	NA	Intergenic	Intergenic	-59279	NM_008991	19299	Mm.399042	NM_008991	ENSMUSG00000028127	Abcd3	AI313901|AU018866|AW146054|PMP68|PMP70|Pxmp1	ATP-binding cassette, sub-family D (ALD), member 3	protein-coding
common_peak2-28510-9-11--0.395349094316936-0.344532117358383	chr5	41844436	41844817	+	0	NA	Intergenic	L1Md_F2|LINE|L1	254768	NM_027295	100972	Mm.41555	NM_027295	ENSMUSG00000029128	Rab28	2700023P08Rik|AW496496	RAB28, member RAS oncogene family	protein-coding
unique_peak1-1222-26-8-1.75797409071615-3.2467506969819	chr11	108305497	108306461	+	0	NA	intron (NM_029606, intron 5 of 27)	intron (NM_029606, intron 5 of 27)	19399	NM_029606	76380	Mm.344071	NM_029586	ENSMUSG00000020728	Cep112	1700001M19Rik|1700029K01Rik|8430407H02Rik|AV043680|AV207351|Ccdc46|Macoco	centrosomal protein 112	protein-coding
common_peak2-31238-28-30-0.0987628094345876-0.332062764479303	chr8	70282858	70283620	+	0	NA	intron (NM_177698, intron 9 of 14)	Lx7|LINE|L1	58955	NM_027626	234353	Mm.32525	NM_027626	ENSMUSG00000030465	Psd3	4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D	pleckstrin and Sec7 domain containing 3	protein-coding
common_peak1-13742-9-7-0.18961340640422-1.05908390183068	chr2	32601099	32601739	+	0	NA	exon (NM_001252547, exon 4 of 11)	exon (NM_001252547, exon 4 of 11)	-4883	NM_027529	70730	Mm.401360	NM_027529	ENSMUSG00000009551	6330409D20Rik	AA517851	RIKEN cDNA 6330409D20 gene	protein-coding
common_peak1-10058-25-15-0.861849905345106-1.28534286439186	chr13	21407883	21408728	+	0	NA	intron (NM_145451, intron 2 of 4)	B1F2|SINE|Alu	4233	NM_145451	75512	Mm.46195	NM_145451	ENSMUSG00000004341	Gpx6	1700020G18Rik|Ry2d1|olfactory	glutathione peroxidase 6	protein-coding
common_peak1-18690-29-17-0.942365079172799-1.68242911687175	chr8	120494643	120495473	+	0	NA	Intergenic	Intergenic	-169229	NM_026758	68533	Mm.181836	NM_026758	ENSMUSG00000031843	Mphosph6	1110001M01Rik|AA536809|C86426	M phase phosphoprotein 6	protein-coding
unique_peak2-36903-0-7--3.84013093047421-1.80617997398389	chr3	96499718	96500148	+	0	NA	promoter-TSS (NM_146135)	promoter-TSS (NM_146135)	-365	NM_146135	229615	Mm.1635	NM_018812	ENSMUSG00000028101	Pias3	Pias3l	protein inhibitor of activated STAT 3	protein-coding
common_peak1-14532-46-37-0.650068429805216-1.49662016474183	chr3	30512833	30514520	+	0	NA	intron (NM_030557, intron 7 of 7)	(TAA)n|Simple_repeat|Simple_repeat	12667	NM_001289621	80732	Mm.200378	NM_030557	ENSMUSG00000037730	Mynn	2810011C24Rik|AA415053|AI661031|AW049392|Mynr|SBBIZ1	myoneurin	protein-coding
common_peak2-26138-36-31-0.479321086167754-0.864252281539331	chr2	13404444	13405328	+	0	NA	intron (NM_001081084, intron 6 of 66)	B4|SINE|B4	8617	NM_001081084	65969	Mm.313915	NM_001081084	ENSMUSG00000026726	Cubn	AA408369|AL022750|D2Wsu88e	cubilin (intrinsic factor-cobalamin receptor)	protein-coding
common_peak1-11381-25-14-0.954959309736587-1.46151065785802	chr15	97560151	97561329	+	0	NA	intron (NM_001168693, intron 1 of 9)	intron (NM_001168693, intron 1 of 9)	1096	NM_001168693	19011	Mm.1001	NM_008902	ENSMUSG00000022468	Endou	Pp11r|Tcl-30	endonuclease, polyU-specific	protein-coding
common_peak1-9571-26-14-1.02100849654994-1.59386218057211	chr11	118009292	118010205	+	0	NA	Intergenic	Intergenic	-19215	NM_001167746	69926	Mm.473893	NM_001167746	ENSMUSG00000033987	Dnah17	2810003K23Rik|Dnahc17|Dnahcl1|Gm1178|mKIAA3028	dynein, axonemal, heavy chain 17	protein-coding
unique_peak1-6356-12-8-0.478850983645327-0.562038191119709	chr7	65803160	65803887	+	0	NA	Intergenic	RSINE1|SINE|B4	-110049	NM_009728	11982	Mm.135129	NM_009728	ENSMUSG00000025324	Atp10a	Atp10c|pfatp	ATPase, class V, type 10A	protein-coding
common_peak2-29676-54-65-0.12869164227128-0.378729626038611	chr6	72369566	72371738	+	0	NA	intron (NM_019802, intron 4 of 14)	intron (NM_019802, intron 4 of 14)	6350	NM_019802	56316	Mm.19937	NM_019802	ENSMUSG00000053460	Ggcx	-	gamma-glutamyl carboxylase	protein-coding
common_peak2-25754-11-10-0.0492619656143161-0.31137425193576	chr19	29366896	29367560	+	0	NA	intron (NM_001048177, intron 12 of 23)	Lx8|LINE|L1	32580	NM_013754	27356	Mm.306511	NM_013754	ENSMUSG00000050957	Insl6	RIF1	insulin-like 6	protein-coding
common_peak1-14945-58-91--0.227612021166516-0.485119537398548	chr3	103279046	103280664	+	0	NA	Intergenic	Intergenic	-99350	NM_001276679	54524	Mm.88818	NM_018800	ENSMUSG00000027849	Syt6	3110037A08Rik|AW048930|sytVI	synaptotagmin VI	protein-coding
unique_peak2-32693-7-20--1.59322659248057-1.71830443967823	chr1	143771827	143772777	+	0	NA	Intergenic	Intergenic	-1219323	NR_040604	75910	Mm.483845	NR_040604		4930590L20Rik	-	RIKEN cDNA 4930590L20 gene	ncRNA
common_peak2-26992-40-46-0.104386831073461-0.357020589591567	chr2	168115113	168115974	+	0	NA	Intergenic	Intergenic	-20712	NM_001081134	241794	Mm.425102	NM_001081134	ENSMUSG00000074575	Kcng1	AW536275|OTTMUSG00000016048	potassium voltage-gated channel, subfamily G, member 1	protein-coding
unique_peak2-34659-3-10--1.87341470859657-1.75805390616669	chr14	123243275	123243724	+	0	NA	intron (NM_144844, intron 21 of 23)	L1_Mus2|LINE|L1	68888	NM_145466	223267	Mm.379358	NM_145466	ENSMUSG00000041625	Ggact	A2ld1	gamma-glutamylamine cyclotransferase	protein-coding
common_peak1-18386-31-37--0.0226888426304619-0.301029995663945	chr8	70896398	70897568	+	0	NA	TTS (NR_038189)	TTS (NR_038189)	4625	NR_038181	73609	Mm.443247	NR_038181	ENSMUSG00000085197	1700125H03Rik	4930510D22Rik	RIKEN cDNA 1700125H03 gene	ncRNA
common_peak2-25709-11-6-0.701338662194009-1.32595962126035	chr19	21077649	21077948	+	0	NA	Intergenic	Intergenic	-49106	NM_028953	13409	Mm.219585	NM_028953	ENSMUSG00000024749	Tmc1	4933416G09Rik|Beethoven|Bth|CWEA1|dn	transmembrane channel-like gene family 1	protein-coding
unique_peak2-32650-0-7--3.84013093047421-1.80617997398389	chr1	133032793	133033269	+	0	NA	intron (NM_145508, intron 1 of 2)	intron (NM_145508, intron 1 of 2)	1780	NM_145508	226419	Mm.39299	NM_145508	ENSMUSG00000016526	Dyrk3	BC006704	dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3	protein-coding
unique_peak2-32994-7-15--1.20090916970181-0.947446088118041	chr10	60752177	60752809	+	0	NA	Intergenic	B3|SINE|B2	-8091	NM_011073	18646	Mm.240313	NM_011073	ENSMUSG00000037202	Prf1	Pfn|Pfp|Prf-1	perforin 1 (pore forming protein)	protein-coding
common_peak2-23430-59-147--0.884089364756372-4.65981659588609	chr15	61984765	61988400	+	0	NA	intron (NR_003368, intron 3 of 8)	intron (NR_003368, intron 3 of 8)	64424	NR_003523	67552	Mm.484027	NM_026230		H2afy3	4933432H23Rik	H2A histone family, member Y3	pseudo
common_peak2-21326-32-35-0.109167017777348-0.348003640999429	chr11	75563657	75564709	+	0	NA	intron (NM_009536, intron 1 of 5)	intron (NM_009536, intron 1 of 5)	17794	NM_009536	22627	Mm.234700	NM_009536	ENSMUSG00000020849	Ywhae	AU019196	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide	protein-coding
unique_peak2-34092-3-8--1.58390809140159-1.39487600375387	chr13	12649884	12650359	+	0	NA	Intergenic	Intergenic	-8029	NM_026184	67475	Mm.358706	NM_026184	ENSMUSG00000057069	Ero1lb	1300013B24Rik|1700065B09Rik|AI447560|ero1-beta	ERO1-like beta (S. cerevisiae)	protein-coding
unique_peak2-36016-0-7--3.84013093047421-1.80617997398389	chr19	40995019	40995348	+	0	NA	Intergenic	Intergenic	25988	NM_028319	72672	Mm.313523	NM_028319	ENSMUSG00000049164	Zfp518a	2810401C22Rik|6330417C12Rik|AI426493|Zfp518|Znf518|Znf518a|mKIAA0335	zinc finger protein 518A	protein-coding
unique_peak1-221-12-4-1.32684789020028-2.04196296489515	chr1	88455593	88456216	+	0	NA	intron (NM_008801, intron 1 of 4)	intron (NM_008801, intron 1 of 4)	23172	NM_008801	18582	Mm.12925	NM_008801	ENSMUSG00000026239	Pde6d	AI841218|PrBP/delta	phosphodiesterase 6D, cGMP-specific, rod, delta	protein-coding
common_peak1-14461-28-23-0.467996619100306-0.690880484874617	chr3	57343167	57344283	+	0	NA	intron (NM_133784, intron 2 of 6)	intron (NM_133784, intron 2 of 6)	36073	NM_133784	97064	Mm.405029	NM_133784	ENSMUSG00000027803	Wwtr1	2310058J06Rik|2610021I22Rik|C78399|Taz	WW domain containing transcription regulator 1	protein-coding
common_peak2-20076-18-13-0.505564229170747-0.625923329873571	chr1	153749354	153750029	+	0	NA	intron (NM_197990, intron 5 of 5)	intron (NM_197990, intron 5 of 5)	147187	NM_001039644	66967	Mm.337691	NM_001039644	ENSMUSG00000043019	Edem3	2310050N11Rik	ER degradation enhancer, mannosidase alpha-like 3	protein-coding
unique_peak2-36455-4-8--1.19338551529556-1.21878474469819	chr2	140395513	140396031	+	0	NA	intron (NM_001013802, intron 3 of 18)	intron (NM_001013802, intron 3 of 18)	101440	NM_001172160	71436	Mm.426781	NM_178382	ENSMUSG00000051379	Flrt3	5530600M07Rik|C430047I10Rik|mKIAA1469	fibronectin leucine rich transmembrane protein 3	protein-coding
common_peak1-9066-11-12--0.191746133889479-0.310474156842889	chr11	69094140	69094762	+	0	NA	Intergenic	RMER1B|Other|Other	42924	NM_172560	216846	Mm.28774	NM_172560	ENSMUSG00000032782	Cntrob	9830165K03Rik|Lip8	centrobin, centrosomal BRCA2 interacting protein	protein-coding
common_peak2-31920-1-13--3.43441193227435-3.36932189928148	chr9	61373474	61374004	+	0	NA	Intergenic	B3A|SINE|B2	153566	NM_001083927	21887	Mm.24255	NM_009389	ENSMUSG00000032280	Tle3	2610103N05Rik|ESG|Grg3a|Grg3b|mKIAA1547	transducin-like enhancer of split 3, homolog of Drosophila E(spl)	protein-coding
common_peak2-27769-79-125--0.148444756323297-0.411005311115473	chr3	131489711	131491367	+	0	NA	Intergenic	Intergenic	-257717	NM_020265	56811	Mm.103593	NM_020265	ENSMUSG00000028031	Dkk2	-	dickkopf homolog 2 (Xenopus laevis)	protein-coding
unique_peak1-3311-8-5-0.420259917226415-1.10484139239135	chr18	78293575	78294045	+	0	NA	Intergenic	Intergenic	26355	NM_001171010	108052	Mm.33832	NM_028122	ENSMUSG00000059336	Slc14a1	2610507K20Rik|3021401A05Rik|UT-B|Utb1	solute carrier family 14 (urea transporter), member 1	protein-coding
common_peak2-21618-11-17--0.661231417190699-0.58239619684445	chr11	100737520	100738196	+	0	NA	intron (NM_011488, intron 10 of 19)	intron (NM_011488, intron 10 of 19)	16060	NM_001164062	20850	Mm.277403	NM_011488	ENSMUSG00000004043	Stat5a	AA959963|STAT5	signal transducer and activator of transcription 5A	protein-coding
common_peak1-12554-24-47--0.791752597953439-1.35770911664594	chr18	6764851	6765906	+	0	NA	intron (NM_181070, intron 1 of 6)	CpG	213	NM_001278447	19330	Mm.132802	NM_181070		Rab18	AA959686	RAB18, member RAS oncogene family	protein-coding
unique_peak1-5097-11-3-1.50869358425161-1.95434855131066	chr4	150269738	150270281	+	0	NA	Intergenic	Intergenic	14021	NM_020569	57320	Mm.277349	NM_020569	ENSMUSG00000028964	Park7	DJ-1|Dj1	Parkinson disease (autosomal recessive, early onset) 7	protein-coding
common_peak2-19860-17-24--0.425559851569687-0.427564438475253	chr1	92179448	92180280	+	0	NA	Intergenic	Intergenic	79309	NM_007722	12778	Mm.6522	NM_007722		Ackr3	AW541270|CXC-R7|CXCR-7|Cmkor1|Cxcr7|RDC-1|Rdc1	atypical chemokine receptor 3	protein-coding
common_peak2-20318-16-18--0.129663871175524-0.307235046933848	chr10	71237563	71238220	+	0	NA	Intergenic	Intergenic	205547	NR_003644	108950	Mm.212793	NM_175390	ENSMUSG00000043859	1700049L16Rik	-	hematological and neurological expressed 1-like pseudogene	pseudo
common_peak2-23616-39-57--0.242219748208418-0.432262512709542	chr15	81871354	81873135	+	0	NA	3' UTR (NM_011482, exon 3 of 3)	3' UTR (NM_011482, exon 3 of 3)	5784	NM_011482	20826	Mm.299312	NM_011482	ENSMUSG00000063480	Nhp2l1	FA-1|Fta1|Ssfa1	NHP2 non-histone chromosome protein 2-like 1 (S. cerevisiae)	protein-coding
common_peak2-28789-17-17-0.0483713367627256-0.325169893479371	chr5	64230240	64231022	+	0	NA	intron (NM_029554, intron 1 of 3)	intron (NM_029554, intron 1 of 3)	26897	NM_029554	76261	Mm.38143	NM_029554	ENSMUSG00000060512	0610040J01Rik	AI662686	RIKEN cDNA 0610040J01 gene	protein-coding
common_peak1-14895-12-20--0.743541437691122-0.625923329873571	chr3	96238415	96239024	+	0	NA	exon (NM_001256180, exon 4 of 5)	exon (NM_001256180, exon 4 of 5)	17510	NM_001256181	329716	Mm.275223	NM_183223	ENSMUSG00000046317	BC107364	D730018G16	cDNA sequence BC107364	protein-coding
common_peak1-10811-61-74-0.15393063925346-0.413122813965767	chr14	79480828	79482504	+	0	NA	intron (NM_027906, intron 27 of 44)	MER58A|DNA|MER1_type	165508	NM_001033215	105590	Mm.486536	NM_001033215	ENSMUSG00000071262	Zfp957	AU017455	zinc finger protein 957	protein-coding
common_peak1-9472-161-228-0.224445898529877-1.0022662216795	chr11	105180449	105182808	+	0	NA	intron (NM_008626, intron 1 of 29)	intron (NM_008626, intron 1 of 29)	27668	NM_008626	17534	Mm.235616	NM_008626	ENSMUSG00000020695	Mrc2	Endo180|mKIAA0709|uPARAP	mannose receptor, C type 2	protein-coding
common_peak1-17659-82-165--0.48177628704119-1.92607939188158	chr7	63937130	63938896	+	0	NA	Intergenic	L1Md_T|LINE|L1	442872	NM_021879	18431	Mm.137052	NM_021879	ENSMUSG00000030450	Oca2	D7H15S12|D7Icr28RN|D7Nic1|p	oculocutaneous albinism II	protein-coding
common_peak2-22168-33-65--0.713056556832925-1.60607097294262	chr12	98258443	98259684	+	0	NA	Intergenic	Intergenic	-973631	NR_103800	69423	Mm.46121	NM_027076	ENSMUSG00000059695	1700019M22Rik	-	NFX-like protein	pseudo
common_peak1-17746-31-45--0.29832328524389-0.470780655014941	chr7	81762849	81763631	+	0	NA	Intergenic	Intergenic	-63574	NM_001038643	108116	Mm.425467	NM_023908	ENSMUSG00000025790	Slco3a1	5830414C08Rik|Anr1|MJAM|OATP-D|R75096|Slc21a11	solute carrier organic anion transporter family, member 3a1	protein-coding
unique_peak2-36331-8-10--0.454209200689727-1.078512453669	chr2	90565252	90565785	+	0	NA	intron (NM_021512, intron 32 of 36)	intron (NM_021512, intron 32 of 36)	-20009	NM_018828	55935	Mm.489638	NM_018828	ENSMUSG00000008200	Fnbp4	FBP30|Fnbp30|mKIAA1014	formin binding protein 4	protein-coding
common_peak2-30549-13-10-0.319040412000471-0.446472590016315	chr7	73588723	73589311	+	0	NA	Intergenic	Intergenic	-16654	NM_053080	56847	Mm.140988	NM_053080	ENSMUSG00000015134	Aldh1a3	ALDH6|RALDH3|V1	aldehyde dehydrogenase family 1, subfamily A3	protein-coding
unique_peak2-36671-4-9--1.34538860874061-1.36011389749466	chr3	30510907	30511414	+	0	NA	intron (NM_001289623, intron 5 of 6)	intron (NM_001289623, intron 5 of 6)	10151	NM_001289621	80732	Mm.200378	NM_030557	ENSMUSG00000037730	Mynn	2810011C24Rik|AA415053|AI661031|AW049392|Mynr|SBBIZ1	myoneurin	protein-coding
common_peak1-13833-110-60-1.47126042281576-12.0365016496108	chr2	59430295	59433158	+	0	NA	Intergenic	Intergenic	-18373	NM_198294	66860	Mm.27917	NM_198294	ENSMUSG00000035168	Tanc1	1200003E16Rik|Tanc|mKIAA1728	tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1	protein-coding
common_peak2-27141-7-11--0.785871670422967-1.21681515183528	chr3	27691810	27692345	+	0	NA	Intergenic	Lx8|LINE|L1	-82716	NM_173182	72007	Mm.38832	NM_173182	ENSMUSG00000039286	Fndc3b	1600019O04Rik|AW550168|Fad104|mKIAA4164	fibronectin type III domain containing 3B	protein-coding
unique_peak2-37969-8-4-0.683294323060208-1.21878474469819	chr6	115277531	115277928	+	0	NA	Intergenic	ID4_|SINE|ID	-33510	NM_001127330	19016	Mm.3020	NM_011146	ENSMUSG00000000440	Pparg	Nr1c3|PPAR-gamma|PPAR-gamma2|PPARgamma|PPARgamma2	peroxisome proliferator activated receptor gamma	protein-coding
common_peak1-14876-19-13-0.595332404604082-0.713635438203849	chr3	95726281	95727377	+	0	NA	Intergenic	L1ME1|LINE|L1	-6351	NM_001253758	66471	Mm.218657	NM_023210	ENSMUSG00000015749	Anp32e	2810018A15Rik|AI047746|AI326868|CPD1|LANP-L|LANPL|mLANP-L	acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	protein-coding
common_peak2-26177-28-33--0.0345037214288766-0.301029995664001	chr2	23039125	23040228	+	0	NA	intron (NM_013771, intron 9 of 18)	intron (NM_013771, intron 9 of 18)	-23320	NM_027635	70981	Mm.314026	NM_027635	ENSMUSG00000026774	4931423N10Rik	-	RIKEN cDNA 4931423N10 gene	protein-coding
unique_peak2-38468-3-6--1.22133801201688-1.08602067057793	chr7	29232386	29232820	+	0	NA	TTS (NM_001039192)	TTS (NM_001039192)	-4401	NM_030562	80749	Mm.483073	NM_030562		Lrfn1	BC004018|SALM2|Semo1	leucine rich repeat and fibronectin type III domain containing 1	protein-coding
unique_peak1-796-30-7-2.16967540949187-4.94875252701509	chr11	113032778	113034064	+	0	NA	intron (NR_015556, intron 1 of 2)	intron (NR_015556, intron 1 of 2)	29731	NR_015556	72386	Mm.266961	NR_015556	ENSMUSG00000087259	2610035D17Rik	-	RIKEN cDNA 2610035D17 gene	ncRNA
common_peak2-24213-10-6-0.549060422951165-1.21398586181642	chr16	78260101	78260574	+	0	NA	Intergenic	Intergenic	-4638	NR_045698	100503619	Mm.387531	NR_045698		E330011O21Rik	-	RIKEN cDNA E330011O21 gene	ncRNA
unique_peak1-1836-11-6-0.701338662194009-1.32595962126035	chr14	41025813	41026463	+	0	NA	Intergenic	Intergenic	557187	NR_045936	73591	Mm.65499	NR_045936		1700109I08Rik	-	RIKEN cDNA 1700109I08 gene	ncRNA
common_peak1-9030-34-21-0.922636908363969-1.85054049304327	chr11	62086099	62087273	+	0	NA	intron (NM_027198, intron 3 of 4)	intron (NM_027198, intron 3 of 4)	8211	NM_027198	69747	Mm.141150	NM_027198	ENSMUSG00000014243	Zswim7	2410012H22Rik	zinc finger SWIM-type containing 7	protein-coding
common_peak2-21322-7-6--0.00826409175941478-0.97990265578305	chr11	75510261	75510521	+	0	NA	intron (NM_133656, intron 2 of 2)	B1_Mur2|SINE|Alu	17630	NM_001277221	12928	Mm.280125	NM_133656		Crk	Crk-I|Crk-II|Crk-III|Crk3|CrkIII|Crko|c-Crk|p38	v-crk sarcoma virus CT10 oncogene homolog (avian)	protein-coding
unique_peak2-38918-0-4--3.16205902536157-1.10720996964787	chr8	18522251	18522475	+	0	NA	Intergenic	MLT2B4|LTR|ERVL	-72810	NM_173189	244329	Mm.235296	NM_173189	ENSMUSG00000039842	Mcph1	5430437K10Rik|BRIT1|D030046N04Rik|MCT	microcephaly, primary autosomal recessive 1	protein-coding
common_peak1-16932-29-29-0.205399485006592-0.423354874519384	chr6	83108680	83109815	+	0	NA	intron (NM_027948, intron 1 of 3)	Lx7|LINE|L1	2849	NM_027948	71837	Mm.17621	NM_027948	ENSMUSG00000030030	1700003E16Rik	AU041756	RIKEN cDNA 1700003E16 gene	protein-coding
unique_peak2-34577-5-7--0.704380336005853-1.01466476204226	chr14	67188823	67189150	+	0	NA	Intergenic	Intergenic	-65102	NM_001271759	11549	Mm.57064	NM_013461	ENSMUSG00000045875	Adra1a	Adra1c	adrenergic receptor, alpha 1a	protein-coding
unique_peak2-33287-9-55--2.61774151565338-8.27956189032736	chr11	70189010	70190794	+	0	NA	Intergenic	L1MEf|LINE|L1	-24369	NM_009660	11687	Mm.4584	NM_009660	ENSMUSG00000018924	Alox15	12-LO|12/15-LO|15-LOX|Alox12l|L-12LO	arachidonate 15-lipoxygenase	protein-coding
unique_peak1-3198-17-6-1.41094141614743-1.84350559086818	chr18	54905964	54906658	+	0	NA	Intergenic	ID_B1|SINE|B4	134913	NR_045400	328957	Mm.402781	NR_045400		9330117O12Rik	9330117O12	RIKEN cDNA 9330117O12 gene	ncRNA
common_peak1-18053-13-14--0.12841856497075-0.301029995663977	chr7	144972355	144972983	+	0	NA	Intergenic	RMER2|LTR|ERV1	343312	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
unique_peak2-38923-6-8--0.60452689106201-1.03789460276074	chr8	22060111	22060594	+	0	NA	intron (NM_001025353, intron 1 of 2)	L1Md_F2|LINE|L1	1398	NM_001025353	100503992	Mm.490240	NM_001025353	ENSMUSG00000071165	Gm6040	Defb51|EG574083	predicted gene 6040	protein-coding
unique_peak1-1628-8-5-0.420259917226415-1.10484139239135	chr13	45391584	45392091	+	0	NA	Intergenic	PB1D10|SINE|Alu	-93274	NM_153789	218203	Mm.212855	NM_153789	ENSMUSG00000038175	Mylip	9430057C20Rik|Mir	myosin regulatory light chain interacting protein	protein-coding
common_peak1-9072-13-10-0.319040412000471-0.446472590016315	chr11	69409550	69410299	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	9538	NM_013415	11932	Mm.235204	NM_013415	ENSMUSG00000041329	Atp1b2	Amog|Atpb-2	ATPase, Na+/K+ transporting, beta 2 polypeptide	protein-coding
unique_peak1-2408-11-7-0.508693584251613-1.21681515183528	chr15	99334474	99335108	+	0	NA	intron (NM_001038658, intron 11 of 11)	intron (NM_001038658, intron 11 of 11)	23805	NM_028224	72393	Mm.39760	NM_028224	ENSMUSG00000023011	Faim2	2900002L20Rik|Lfg|Lfg2|NMP25|Nmp35|Tmbim2	Fas apoptotic inhibitory molecule 2	protein-coding
unique_peak2-35684-4-7--1.02346051385325-1.09384600808989	chr18	19960428	19960841	+	0	NA	Intergenic	ORR1B1|LTR|MaLR	199964	NM_007882	13507	Mm.89935	NM_007882	ENSMUSG00000059898	Dsc3	5430426I24Rik	desmocollin 3	protein-coding
common_peak1-7958-13-8-0.608547029195456-0.660903317613904	chr1	155075159	155075651	+	0	NA	intron (NM_010683, intron 24 of 27)	intron (NM_010683, intron 24 of 27)	-41828	NM_008485	16782	Mm.329272	NM_008485	ENSMUSG00000026479	Lamc2	AA589349	laminin, gamma 2	protein-coding
unique_peak1-6520-6-0-2.5653981103803-2.10720996964787	chr7	118956029	118956375	+	0	NA	Intergenic	Intergenic	-32711	NM_173739	233733	Mm.323322	NM_173739	ENSMUSG00000038296	Galnt18	2900011G21Rik|BC024988|Galntl4	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 18	protein-coding
common_peak2-20460-32-41--0.113225403559101-0.311888488969622	chr10	42477808	42478572	+	0	NA	Intergenic	Intergenic	-3112	NM_153055	140740	Mm.214344	NM_153055	ENSMUSG00000019802	Sec63	5730478J10Rik|AI649014|AW319215	SEC63-like (S. cerevisiae)	protein-coding
common_peak2-32107-15-23--0.5727977501655-0.575340103425218	chr9	99703432	99704095	+	0	NA	Intergenic	Intergenic	72826	NM_011440	20669	Mm.261595	NM_011440	ENSMUSG00000053747	Sox14	-	SRY (sex determining region Y)-box 14	protein-coding
common_peak1-13524-35-14-1.52447966285399-3.65980906459644	chr2	146553623	146555301	+	0	NA	Intergenic	Intergenic	-127163	NM_001033298	228730	Mm.292352	NM_001033298	ENSMUSG00000074749	Kiz	Gm114|Ncrna00153|Plk1s1	kizuna centrosomal protein	protein-coding
unique_peak1-7292-11-6-0.701338662194009-1.32595962126035	chr9	108143401	108143951	+	0	NA	intron (NM_001276485, intron 1 of 2)	intron (NM_001276485, intron 1 of 2)	22470	NM_010017	13138	Mm.7524	NM_010017		Dag1	D9Wsu13e|DG|Dp427|Dp71	dystroglycan 1	protein-coding
common_peak2-26914-10-9-0.0344872501214071-1.05503135781948	chr2	163073006	163073492	+	0	NA	intron (NM_001098799, intron 1 of 8)	intron (NM_001098799, intron 1 of 8)	22059	NM_001098799	269389	Mm.207709	NM_001098799	ENSMUSG00000074607	Tox2	AI851523|AV026525|BI987407|Gcx1|RxHMG1	TOX high mobility group box family member 2	protein-coding
common_peak1-12603-34-15-1.38206852700127-3.19271205772594	chr18	25540387	25541633	+	0	NA	intron (NM_001033532, intron 8 of 10)	intron (NM_001033532, intron 8 of 10)	213489	NM_001033532	225289	Mm.391081	NM_001033532	ENSMUSG00000033632	AW554918	4921538P22|AI461742|Kiaa1328|mKIAA1328	expressed sequence AW554918	protein-coding
common_peak2-30750-7-13--1.00826409175941-0.697979855752659	chr7	119739895	119740235	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	-82769	NM_001166584	21676	Mm.24685	NM_009346	ENSMUSG00000055320	Tead1	2610024B07Rik|B230114H05Rik|Gtrgeo5|TEAD-1|TEF-1|Tcf13|mTEF-1	TEA domain family member 1	protein-coding
unique_peak2-34717-4-8--1.19338551529556-1.21878474469819	chr15	36179122	36179550	+	0	NA	intron (NM_013923, intron 5 of 9)	MTD|LTR|MaLR	-9417	NR_106173	102465888		NR_106173	miRBase:MI0026025	Mir8097	mmu-mir-8097	microRNA mir-8097	ncRNA
common_peak1-16444-25-47--0.72311259537605-1.23561791483487	chr5	135009156	135009824	+	0	NA	intron (NM_009990, intron 2 of 16)	intron (NM_009990, intron 2 of 16)	18814	NM_001039162	269713	Mm.255138	NM_009990	ENSMUSG00000063146	Clip2	B230327O20|CLIP-115|Clip1|Cyln2|WSCR4|mKIAA0291|wbscr4	CAP-GLY domain containing linker protein 2	protein-coding
unique_peak1-4960-10-2-1.77145284428761-2.09384600808989	chr4	99151950	99152598	+	0	NA	Intergenic	Intergenic	-170716	NM_010425	15221	Mm.4758	NM_010425	ENSMUSG00000067261	Foxd3	CWH3|Genesis|Hfh2	forkhead box D3	protein-coding
common_peak2-27782-21-58--1.31315378409561-3.45664717237459	chr3	135422793	135423937	+	0	NA	Intergenic	Lx4A|LINE|L1	-64878	NM_026228	67547	Mm.30239	NM_026228	ENSMUSG00000053897	Slc39a8	4933419D20Rik|AA986696|BIGM103|ZIP-8|Zip8	solute carrier family 39 (metal ion transporter), member 8	protein-coding
unique_peak2-35041-2-6--1.72480917832092-1.26211192963361	chr16	3820568	3821030	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-18176	NM_008762	18312	Mm.377102	NM_008762	ENSMUSG00000059043	Olfr15	MOR256-17|OR3	olfactory receptor 15	protein-coding
common_peak1-9950-40-32-0.614581563392645-1.25391625579201	chr12	111038257	111039874	+	0	NA	Intergenic	L1M2|LINE|L1	52977	NR_037233	100499517		NR_037233	miRBase:MI0014035	Mir3072	mmu-mir-3072	microRNA 3072	ncRNA
common_peak1-8219-12-11-0.0638134843664826-0.337263207250336	chr10	8899244	8899854	+	0	NA	Intergenic	MIR|SINE|MIR	-293681	NM_175155	70097	Mm.338275	NM_175155	ENSMUSG00000015305	Sash1	1100001C18Rik|2500002E12Rik|A330076K04Rik|mKIAA0790	SAM and SH3 domain containing 1	protein-coding
unique_peak1-4903-12-2-2.06381348436648-2.79529063155376	chr4	45512398	45512978	+	0	NA	intron (NM_001033306, intron 1 of 5)	intron (NM_001033306, intron 1 of 5)	31012	NM_001033306	230126	Mm.251716	NM_001033306	ENSMUSG00000044813	Shb	BC028832	src homology 2 domain-containing transforming protein B	protein-coding
common_peak1-11203-13-9-0.456543935750406-0.53895475198017	chr15	77908124	77908700	+	0	NA	intron (NM_007583, intron 1 of 3)	intron (NM_007583, intron 1 of 3)	41298	NM_007583	12300	Mm.277338	NM_007583		Cacng2	AW060990|B230105C07Rik|B930041E13Rik|stargazer|stargazin|stg|wag|waggler	calcium channel, voltage-dependent, gamma subunit 2	protein-coding
common_peak1-16993-16-12-0.417823924126969-0.489164546851866	chr6	88074556	88075409	+	0	NA	Intergenic	Intergenic	-20730	NR_105795	102465196		NR_105795	miRBase:MI0021905	Mir6376	mmu-mir-6376	microRNA mir-6376	ncRNA
common_peak2-27691-8-14--0.901668177660948-0.660903317613906	chr3	121559990	121560587	+	0	NA	Intergenic	(TTTC)n|Simple_repeat|Simple_repeat	-42155	NM_008991	19299	Mm.399042	NM_008991	ENSMUSG00000028127	Abcd3	AI313901|AU018866|AW146054|PMP68|PMP70|Pxmp1	ATP-binding cassette, sub-family D (ALD), member 3	protein-coding
common_peak2-27203-40-49-0.0151194929763738-0.309716464454027	chr3	40744643	40746204	+	0	NA	Intergenic	Intergenic	-9130	NM_001040399	214048	Mm.46782	NM_027663	ENSMUSG00000037814	Larp1b	1700108L22Rik|4933421B21Rik|AA690246|Larp2	La ribonucleoprotein domain family, member 1B	protein-coding
unique_peak1-1951-9-5-0.604650905683064-1.21398586181642	chr14	99366267	99366726	+	0	NA	Intergenic	(GAA)n|Simple_repeat|Simple_repeat	78859	NM_175245	76789	Mm.38912	NM_175245	ENSMUSG00000033186	Mzt1	2410129H14Rik|AI120158|Mozart1	mitotic spindle organizing protein 1	protein-coding
common_peak2-21346-18-22--0.210642804828661-0.321718508207525	chr11	77215682	77216743	+	0	NA	intron (NM_001291190, intron 3 of 13)	intron (NM_001291190, intron 3 of 13)	54430	NM_001291190	237860	Mm.440381	NM_177710	ENSMUSG00000037926	Ssh2	SSH-2|SSH-2L|mSSH-2L	slingshot homolog 2 (Drosophila)	protein-coding
common_peak2-24848-8-8--0.164702583494742-1.00793137938329	chr17	75111263	75111743	+	0	NA	Intergenic	Intergenic	-5587	NM_152817	74196	Mm.209503	NM_152817	ENSMUSG00000024078	Ttc27	2610511O17Rik	tetratricopeptide repeat domain 27	protein-coding
common_peak2-28295-60-80-0.014441858735907-0.306391792142995	chr4	132260574	132262059	+	0	NA	intron (NM_210071, intron 12 of 16)	intron (NM_210071, intron 12 of 16)	27145	NM_201368	381560	Mm.44558	NM_201368	ENSMUSG00000037752	Xkr8	4931440N07Rik|AI597014|Gm1031|XRG8|mXkr8	X Kell blood group precursor related family member 8 homolog	protein-coding
common_peak2-29640-6-6--0.241956811677302-0.947717972411649	chr6	59209302	59209681	+	0	NA	Intergenic	RMER6B|LTR|ERVK	50627	NM_001081145	68140	Mm.25843	NM_001081145	ENSMUSG00000049232	Tigd2	3632410O17Rik	tigger transposable element derived 2	protein-coding
common_peak2-31666-16-9-0.796335547380699-0.844317084070804	chr8	126757964	126758503	+	0	NA	intron (NM_139272, intron 1 of 15)	intron (NM_139272, intron 1 of 15)	2939	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
unique_peak1-6641-19-10-0.943255708024389-1.16735254179725	chr8	11004080	11004907	+	0	NA	exon (NM_001081212, exon 1 of 2)	exon (NM_001081212, exon 1 of 2)	-3357	NR_046017	619321	Mm.403007	NR_046017	ENSMUSG00000096938	9530052E02Rik	-	RIKEN cDNA 9530052E02 gene	ncRNA
unique_peak1-4767-14-6-1.09186123830004-1.16633110333236	chr3	122512058	122512636	+	0	NA	intron (NM_153422, intron 11 of 20)	intron (NM_153422, intron 11 of 20)	-7449	NR_045168	71647	Mm.449992	NR_045168		4930447N08Rik	-	RIKEN cDNA 4930447N08 gene	ncRNA
unique_peak2-38406-4-8--1.19338551529556-1.21878474469819	chr7	19867277	19867705	+	0	NA	promoter-TSS (NM_013648)	promoter-TSS (NM_013648)	-482	NM_013648	20167	Mm.24142	NM_013648	ENSMUSG00000030401	Rtn2	MMS10-P|Ms10p|NSPLI|Nspl1	reticulon 2 (Z-band associated protein)	protein-coding
common_peak2-21735-42-34-0.613046310922218-1.29674067475645	chr11	115072713	115073688	+	0	NA	intron (NM_001033393, intron 8 of 9)	intron (NM_001033393, intron 8 of 9)	24399	NM_001033393	320534	Mm.260587	NM_001033393	ENSMUSG00000045980	Tmem104	C630005D06Rik|mFLJ00021	transmembrane protein 104	protein-coding
common_peak1-13285-30-13-1.36232048743427-2.74004546941311	chr19	38035312	38036579	+	0	NA	intron (NM_001099634, intron 18 of 52)	ID4_|SINE|ID	82122	NM_001099634	226101	Mm.34674	NM_177035	ENSMUSG00000048612	Myof	2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3	myoferlin	protein-coding
unique_peak1-1846-11-8-0.338768582809301-1.14218153353838	chr14	47514995	47515816	+	0	NA	intron (NM_028966, intron 2 of 11)	intron (NM_028966, intron 2 of 11)	12765	NM_001037221	74480	Mm.214454	NM_028966	ENSMUSG00000021838	Samd4	1700024G08Rik|1700111L17Rik|4933436G17Rik|Samd4a|Smaug|Smaug1	sterile alpha motif domain containing 4	protein-coding
common_peak1-17570-20-21-0.0286431659538957-0.306080386793804	chr7	35117892	35118659	+	0	NA	Intergenic	Intergenic	-47647	NM_172741	233103	Mm.491097	NM_172741	ENSMUSG00000066571	4931406P16Rik	AA553327|mKIAA0355	RIKEN cDNA 4931406P16 gene	protein-coding
common_peak1-8678-121-107-0.81247827971453-5.40552165400923	chr11	3389751	3394174	+	0	NA	exon (NM_172791, exon 5 of 7)	exon (NM_172791, exon 5 of 7)	3732	NM_172791	237625	Mm.100476	NM_172791	ENSMUSG00000034579	Pla2g3	-	phospholipase A2, group III	protein-coding
unique_peak1-856-26-5-2.34293659143731-4.60318595491365	chr11	20446049	20446799	+	0	NA	intron (NM_021372, intron 1 of 1)	B1F2|SINE|Alu	3168	NM_021372	58172	Mm.339676	NM_021372	ENSMUSG00000049800	Sertad2	AB041541|AU021878|Kiaa0127|SEI-2|Sei2|TRIP-Br2|mKIAA0127	SERTA domain containing 2	protein-coding
unique_peak1-7289-9-3-1.18961340640422-1.57096726280955	chr9	107703018	107703521	+	0	NA	intron (NM_029169, intron 6 of 20)	intron (NM_029169, intron 6 of 20)	-29936	NM_148930	83486	Mm.259197	NM_148930	ENSMUSG00000032580	Rbm5	D030069N10Rik	RNA binding motif protein 5	protein-coding
common_peak2-27786-13-10-0.319040412000471-0.446472590016315	chr3	137864608	137865219	+	0	NA	Intergenic	L1Md_A|LINE|L1	-15236	NM_001163386	67741	Mm.383221	NM_001163385	ENSMUSG00000012042	4930579F01Rik	-	RIKEN cDNA 4930579F01 gene	protein-coding
common_peak2-29936-11-14--0.398197011356905-0.379391706698377	chr6	115676677	115676960	+	0	NA	Intergenic	PB1D10|SINE|Alu	8151	NM_001168259	94346	Mm.29739	NM_144805	ENSMUSG00000059900	Tmem40	9030407H20Rik|AV091463|W64236	transmembrane protein 40	protein-coding
unique_peak2-36963-3-5--0.998945590680433-0.96108193396963	chr3	110142975	110143448	+	0	NA	Intergenic	MTE2b|LTR|MaLR	-89294	NR_024139	99890	Mm.36115	NM_178891	ENSMUSG00000049300	Prmt6	AW124876|BB233495|Hrmt1l6	protein arginine N-methyltransferase 6	protein-coding
common_peak2-25047-64-101--0.206978940262892-0.495352088675007	chr18	32067512	32068505	+	0	NA	TTS (NM_026006)	TTS (NM_026006)	3549	NM_026006	67158	Mm.31537	NM_026006	ENSMUSG00000044982	Sft2d3	2610206C24Rik|AI847965|AW046173	SFT2 domain containing 3	protein-coding
common_peak1-17355-30-33-0.082212568241534-0.329362479200675	chr7	19332356	19333652	+	0	NA	Intergenic	ETnERV2-int|LTR|ERVK	29565	NM_001004152	243862	Mm.389833	NM_001004152	ENSMUSG00000044903	Psg22	AA408604|cea9	pregnancy-specific glycoprotein 22	protein-coding
unique_peak1-4592-12-4-1.32684789020028-2.04196296489515	chr3	58370954	58371418	+	0	NA	Intergenic	RMER16-int|LTR|ERVK	-9394	NM_001040396	69227	Mm.270950	NM_001040396	ENSMUSG00000075700	Selt	2810407C02Rik|5730408P04Rik	selenoprotein T	protein-coding
unique_peak1-5482-9-4-0.867685311516858-1.36011389749466	chr5	130184515	130185046	+	0	NA	Intergenic	MYSERV6-int|LTR|ERVK	-8817	NM_172462	22648	Mm.135067	NM_172462	ENSMUSG00000051034	Zfp11	6720465D24|Krox-6|Zfp-11	zinc finger protein 11	protein-coding
common_peak1-11966-20-9-1.16614668970383-1.52222891542741	chr17	6806830	6807850	+	0	NA	intron (NM_001166627, intron 1 of 4).3	intron (NM_001166627, intron 1 of 4).3	844	NM_001166630	100040563	Mm.457381	NM_001166630		Dynlt1c	100040603|Dynlt1d	dynein light chain Tctex-type 1C	protein-coding
unique_peak2-35405-10-24--1.28744084476596-1.59083646988122	chr17	32965811	32967042	+	0	NA	intron (NM_001293229, intron 1 of 2)	intron (NM_001293229, intron 1 of 2)	780	NM_001293229	240064	Mm.476307	NM_177359		Zfp799	6030490I01Rik	zinc finger protein 799	protein-coding
common_peak2-31033-12-15--0.351224014912361-0.332077462497413	chr8	13643827	13644690	+	0	NA	intron (NM_009025, intron 1 of 23)	intron (NM_009025, intron 1 of 23)	33329	NM_009025	19414	Mm.18517	NM_009025	ENSMUSG00000031453	Rasa3	AI326412|C86362|E130011G04|GAPIII|scat	RAS p21 protein activator 3	protein-coding
unique_peak2-34515-8-8--0.164702583494742-1.00793137938329	chr14	52016409	52017047	+	0	NA	Intergenic	L1Md_F3|LINE|L1	-13948	NM_011686	669149	Mm.377117	NM_011686	ENSMUSG00000000606	Vmn2r88	V2r13|V2r3	vomeronasal 2, receptor 88	protein-coding
unique_peak1-2180-6-5--0.0195643903408542-0.947717972411649	chr15	62121661	62122140	+	0	NA	Intergenic	Intergenic	-70894	NR_003523	67552	Mm.484027	NM_026230		H2afy3	4933432H23Rik	H2A histone family, member Y3	pseudo
common_peak1-14227-21-11-0.984526764545079-1.3750876294627	chr2	152728296	152729149	+	0	NA	Intergenic	Intergenic	-8366	NM_001081044	228785	Mm.250604	NM_001081044	ENSMUSG00000027470	Mylk2	9830004H17Rik|BB138278	myosin, light polypeptide kinase 2, skeletal muscle	protein-coding
common_peak2-32318-8-18--1.24270509549601-1.15812782348128	chrX	71364738	71365320	+	0	NA	Intergenic	Intergenic	-7776	NM_008106	14539	Mm.284825	NM_008106	ENSMUSG00000031394	Opn1mw	Gcp	opsin 1 (cone pigments), medium-wave-sensitive (color blindness, deutan)	protein-coding
unique_peak1-945-9-5-0.604650905683064-1.21398586181642	chr11	56269510	56270016	+	0	NA	Intergenic	Intergenic	-415274	NM_153079	216749	Mm.213205	NM_153079	ENSMUSG00000037393	Nmur2	Nmu2r	neuromedin U receptor 2	protein-coding
unique_peak2-32933-8-9--0.316705676939792-1.03275496310833	chr10	31313389	31313827	+	0	NA	intron (NM_001146349, intron 1 of 5)	intron (NM_001146349, intron 1 of 5)	15923	NM_001146349	268291	Mm.295212	NM_001146349	ENSMUSG00000063760	Rnf217	AU016819|Ibrdc1	ring finger protein 217	protein-coding
unique_peak1-7315-17-3-2.21829633820504-3.11807310444576	chr9	119936694	119937598	+	0	NA	Intergenic	Intergenic	-4430	NM_011724	22437	Mm.10117	NM_011724	ENSMUSG00000079243	Xirp1	AI415219|Cmya1	xin actin-binding repeat containing 1	protein-coding
common_peak2-28408-27-41--0.400771471883525-0.542588322087496	chr4	141287163	141288521	+	0	NA	Intergenic	Intergenic	-8508	NM_001017966	68817	Mm.393721	NM_001017966		Ddi2	1110056G13Rik|1700027M01Rik|9130022E05Rik|AI604911|AU040698	DNA-damage inducible protein 2	protein-coding
common_peak2-20534-52-74--0.120558700230181-0.339000539072378	chr10	63338307	63339800	+	0	NA	intron (NM_001164519, intron 2 of 12)	intron (NM_001164519, intron 2 of 12)	55250	NM_001164519	216033	Mm.444692	NM_177612	ENSMUSG00000060843	Ctnna3	4930429L08Rik|4933408A16|Catna3|Vr22	catenin (cadherin associated protein), alpha 3	protein-coding
common_peak2-32267-7-5-0.214128329577033-1.01466476204226	chrX	12587207	12587574	+	0	NA	Intergenic	PB1D10|SINE|Alu	-31751	NR_038158	70489	Mm.383563	NR_038158	ENSMUSG00000087424	5730405O15Rik	-	RIKEN cDNA 5730405O15 gene	ncRNA
unique_peak2-34248-2-6--1.72480917832092-1.26211192963361	chr13	58536820	58537105	+	0	NA	Intergenic	L1MEf|LINE|L1	-32258	NM_001301341	15387	Mm.142872	NM_025279	ENSMUSG00000021546	Hnrnpk	Hnrpk|KBBP|NOVA	heterogeneous nuclear ribonucleoprotein K	protein-coding
common_peak2-26538-9-6-0.382258484346616-1.11707584880836	chr2	92677840	92678210	+	0	NA	Intergenic	Intergenic	-77233	NM_030725	80976	Mm.33490	NM_030725	ENSMUSG00000027220	Syt13	5730409J20Rik|AI549909|mKIAA1427	synaptotagmin XIII	protein-coding
common_peak2-23307-89-118-0.140148991518059-0.448478082184892	chr15	36373729	36376374	+	0	NA	Intergenic	B3A|SINE|B2	51495	NM_175134	68839	Mm.396537	NM_175134	ENSMUSG00000048307	Ankrd46	1110054N06Rik|AI314978|AI987733	ankyrin repeat domain 46	protein-coding
common_peak2-21756-12-16--0.4386868561627-0.368541233333383	chr11	116012249	116012791	+	0	NA	intron (NM_172571, intron 16 of 30)	intron (NM_172571, intron 16 of 30)	-12338	NM_024177	60441	Mm.29974	NM_024177	ENSMUSG00000020775	Mrpl38	1110036N21Rik|4733401F03Rik|MRP-L3|R75240|Rpml3	mitochondrial ribosomal protein L38	protein-coding
unique_peak2-35075-9-15--0.81038659359578-0.630231561310125	chr16	15958714	15959306	+	0	NA	intron (NM_146068, intron 10 of 19)	intron (NM_146068, intron 10 of 19)	71631	NM_007679	12609	Mm.347407	NM_007679		Cebpd	-	CCAAT/enhancer binding protein (C/EBP), delta	protein-coding
unique_peak1-1432-16-5-1.53330114154691-1.80287260729378	chr12	87398001	87398813	+	0	NA	3' UTR (NM_009368, exon 7 of 7)	3' UTR (NM_009368, exon 7 of 7)	21584	NM_009368	21809	Mm.3992	NM_009368	ENSMUSG00000021253	Tgfb3	Tgfb-3	transforming growth factor, beta 3	protein-coding
common_peak1-15721-24-27--0.0141450192898871-0.304978344874324	chr4	141444411	141445327	+	0	NA	Intergenic	CT-rich|Low_complexity|Low_complexity	-14034	NM_025994	27984	Mm.395598	NM_025994	ENSMUSG00000040659	Efhd2	2600015J22Rik|AA408606|D4Wsu27e	EF hand domain containing 2	protein-coding
unique_peak2-32630-2-10--2.37688587490062-2.09384600808989	chr1	121431294	121431938	+	0	NA	Intergenic	Intergenic	8885	NM_146103	226351	Mm.439806	NM_146103	ENSMUSG00000098923	Tmem185b	2500001K11Rik	transmembrane protein 185B	protein-coding
common_peak1-12795-10-7-0.356415345008769-1.12966497611638	chr18	64660655	64661138	+	0	NA	intron (NM_001142950, intron 14 of 14)	intron (NM_001142950, intron 14 of 14)	-12176	NM_007998	14151	Mm.1070	NM_007998	ENSMUSG00000024588	Fech	AI894116|Fcl|fch	ferrochelatase	protein-coding
unique_peak2-39088-4-5--0.608423014574403-0.909929411522249	chr8	75535323	75535642	+	0	NA	intron (NM_010687, intron 6 of 14)	B4A|SINE|B4	-4929	NR_039551	100628574		NR_039551	miRBase:MI0016979	Mir28b	mmu-mir-28b	microRNA 28b	ncRNA
common_peak1-8121-34-72--0.807756031878752-2.03570638876314	chr1	184731560	184732620	+	0	NA	intron (NM_144796, intron 1 of 7)	intron (NM_144796, intron 1 of 7)	37053	NM_144796	96935	Mm.331052	NM_144796	ENSMUSG00000038576	Susd4	AI848994|E430021N18Rik|N28096	sushi domain containing 4	protein-coding
unique_peak1-5490-7-4-0.477162735410827-1.09384600808989	chr5	134246275	134246746	+	0	NA	Intergenic	Intergenic	-329108	NM_030719	80909	Mm.45218	NM_030719		Gatsl2	7530428J21Rik|AW742413|Gats|Gatsl1	GATS protein-like 2	protein-coding
common_peak2-28000-134-182-0.228869670495382-0.863154762108089	chr4	45488709	45492091	+	0	NA	intron (NM_001033306, intron 2 of 5)	intron (NM_001033306, intron 2 of 5)	53300	NM_001033306	230126	Mm.251716	NM_001033306	ENSMUSG00000044813	Shb	BC028832	src homology 2 domain-containing transforming protein B	protein-coding
common_peak2-23961-14-7-0.899216160357645-0.947446088118041	chr16	16223615	16224018	+	0	NA	intron (NM_026163, intron 1 of 12)	intron (NM_026163, intron 1 of 12)	10378	NM_026163	67451	Mm.2252	NM_026163	ENSMUSG00000041957	Pkp2	1200008D14Rik|1200012P04Rik|AA516617|Pkp2l	plakophilin 2	protein-coding
unique_peak1-3612-14-3-1.89921616035764-2.80787975886178	chr19	33101283	33101889	+	0	NA	Intergenic	Intergenic	269519	NM_008960	19211	Mm.245395	NM_008960	ENSMUSG00000013663	Pten	2310035O07Rik|A130070J02Rik|AI463227|B430203M17Rik|MMAC1|TEP1	phosphatase and tensin homolog	protein-coding
common_peak1-11617-11-14--0.398197011356905-0.379391706698377	chr16	18498383	18498764	+	0	NA	promoter-TSS (NR_104347)	promoter-TSS (NR_104347)	-233	NM_001081682	13972	Mm.236139	NM_023120	ENSMUSG00000000884	Gnb1l	ESTM55|Gm16314|Me49f07|OTTMUSG00000033458|Wdr14|Wdvcf	guanine nucleotide binding protein (G protein), beta polypeptide 1-like	protein-coding
common_peak2-29486-32-11-1.6941295184985-3.91086877283603	chr6	31114325	31114869	+	0	NA	TTS (NR_110469)	TTS (NR_110469)	53877	NR_110470	232685	Mm.443019	NM_144555		Lincpint	MNCb-1768|Pint|linc-Pint	long intergenic non-protein coding RNA, Trp53 induced transcript	ncRNA
unique_peak2-39439-2-4--1.23938235115068-0.931118710592187	chr9	45839733	45840150	+	0	NA	intron (NM_027498, intron 1 of 24)	intron (NM_027498, intron 1 of 24)	19038	NM_027498	70661	Mm.219459	NM_027498	ENSMUSG00000034135	Sik3	5730525O22Rik|9030204A07Rik|AI447252|AI846254|AI849445|Qsk|SIK-3|mKIAA0999	SIK family kinase 3	protein-coding
common_peak1-18719-17-15-0.218296338205038-0.403453972741633	chr8	123048573	123049375	+	0	NA	intron (NM_198671, intron 1 of 15)	intron (NM_198671, intron 1 of 15)	-10783	NM_001145897	382034	Mm.334856	NM_198671	ENSMUSG00000031822	Gse1	2210013I18Rik|mKIAA0182	genetic suppressor element 1	protein-coding
common_peak2-31952-59-38-1.03996178201033-3.61946825268519	chr9	65214100	65215632	+	0	NA	intron (NM_001111145, intron 1 of 6)	L1M5|LINE|L1	5999	NM_001111145	208080	Mm.291862	NM_001111145	ENSMUSG00000086228	Ubap1l	Gm514	ubiquitin-associated protein 1-like	protein-coding
common_peak2-31425-22-19-0.325356010200042-0.479250674391597	chr8	94685946	94686870	+	0	NA	Intergenic	Intergenic	193611	NR_110452	71296	Mm.86664	NR_033641	ENSMUSG00000031736	Crnde	4933436C20Rik	colorectal neoplasia differentially expressed (non-protein coding)	ncRNA
unique_peak1-3369-7-4-0.477162735410827-1.09384600808989	chr19	3332000	3332565	+	0	NA	intron (NM_013495, intron 1 of 18)	intron (NM_013495, intron 1 of 18)	8981	NM_013495	12894	Mm.18522	NM_013495	ENSMUSG00000024900	Cpt1a	C730027G07|CPTI|Cpt1	carnitine palmitoyltransferase 1a, liver	protein-coding
common_peak2-20057-30-45--0.35388654656514-0.51862626278861	chr1	151428538	151429441	+	0	NA	Intergenic	Intergenic	379425	NM_008869	18783	Mm.4186	NM_008869	ENSMUSG00000056220	Pla2g4a	Pla2g4|cPLA2|cPLA2alpha	phospholipase A2, group IVA (cytosolic, calcium-dependent)	protein-coding
unique_peak1-472-14-1-2.89921616035764-3.91338994363176	chr1	173418899	173419670	+	0	NA	Intergenic	MuLV-int|LTR|ERV1	-14325	NM_019484	56009	Mm.389208	NM_019484	ENSMUSG00000060244	Alyref2	C130042O11Rik|REF2|Refbp2	Aly/REF export factor 2	protein-coding
common_peak1-10494-9-6-0.382258484346616-1.11707584880836	chr14	7847819	7848333	+	0	NA	intron (NM_001164727, intron 2 of 6)	intron (NM_001164727, intron 2 of 6)	11887	NM_001164727	100038847	Mm.443041	NM_001164727	ENSMUSG00000093985	Gm10406	ENSMUSG00000072735	predicted gene 10406	protein-coding
common_peak2-22309-14-15--0.100783839642355-0.301029995663982	chr13	21179948	21180610	+	0	NA	Intergenic	Intergenic	-15111	NM_146535	258528	Mm.377554	NM_146535	ENSMUSG00000042869	Olfr1370	MOR256-14	olfactory receptor 1370	protein-coding
unique_peak2-34335-4-7--1.02346051385325-1.09384600808989	chr13	98578974	98579450	+	0	NA	Intergenic	Intergenic	249257	NR_046157	328314	Mm.138047	NR_046157		Gm5086	B230311A21|EG328314	predicted gene 5086	ncRNA
unique_peak2-33599-6-10--0.894033508256995-1.21398586181642	chr11	89060307	89060755	+	0	NA	Intergenic	B4|SINE|B4	103342	NM_008711	18121	Mm.135266	NM_008711	ENSMUSG00000048616	Nog	-	noggin	protein-coding
common_peak1-9733-42-16-1.65486648661684-5.03144964407977	chr12	40247740	40249230	+	0	NA	Intergenic	Intergenic	515478	NM_007487	11861	Mm.12723	NM_007487	ENSMUSG00000047446	Arl4a	AI467555|Arl4	ADP-ribosylation factor-like 4A	protein-coding
common_peak1-16701-63-85-0.0120478363684917-0.306080045305055	chr6	18848041	18849665	+	0	NA	Intergenic	Intergenic	32535	NM_001167757	75196	Mm.67665	NM_029202	ENSMUSG00000029517	Ankrd7	4930532L20Rik|AV278427	ankyrin repeat domain 7	protein-coding
unique_peak1-629-7-1-1.79909083029819-1.80617997398389	chr10	30760031	30760540	+	0	NA	Intergenic	Lx7|LINE|L1	-197696	NM_013904	15214	Mm.103573	NM_013904	ENSMUSG00000019789	Hey2	CHF1|Herp1|Hrt2|bHLHb32|hesr2	hairy/enhancer-of-split related with YRPW motif 2	protein-coding
common_peak2-31069-28-28-0.194978124693891-0.390124689062469	chr8	22706135	22706891	+	0	NA	Intergenic	Intergenic	-1576	NM_001177518	665927	Mm.422762	NM_001177518	ENSMUSG00000079114	Gm7849	EG665927	predicted gene 7849	protein-coding
common_peak2-22784-8-9--0.316705676939792-1.03275496310833	chr14	99548801	99549269	+	0	NA	intron (NM_029320, intron 9 of 17)	intron (NM_029320, intron 9 of 17)	-50046	NM_028315	72662	Mm.163339	NM_028315	ENSMUSG00000033166	Dis3	2810028N01Rik	DIS3 mitotic control homolog (S. cerevisiae)	protein-coding
unique_peak2-33096-3-14--2.3208736855678-2.58603100924543	chr10	80344821	80345277	+	0	NA	intron (NM_001081688, intron 1 of 17)	intron (NM_001081688, intron 1 of 17)	2488	NM_001081688	432478	Mm.235302	NM_001081688	ENSMUSG00000059406	Tmprss9	Serase-1B	transmembrane protease, serine 9	protein-coding
common_peak2-29828-96-130-0.132628212817878-0.456429256413289	chr6	92091130	92092342	+	0	NA	intron (NM_011630, intron 3 of 14)	intron (NM_011630, intron 3 of 14)	42281	NM_025578	64658	Mm.87062	NM_025578	ENSMUSG00000014551	Mrps25	2810429N01Rik|Rpms25	mitochondrial ribosomal protein S25	protein-coding
unique_peak2-33928-9-11--0.395349094316936-0.344532117358383	chr12	70111474	70112102	+	0	NA	Intergenic	Intergenic	148385	NM_009093	20090	Mm.379006	NM_009093	ENSMUSG00000034892	Rps29	-	ribosomal protein S29	protein-coding
common_peak2-24326-94-110-0.33517370149921-1.084647106008	chr17	83705664	83707292	+	0	NA	Intergenic	Intergenic	-43793	NM_001114361	78798	Mm.295565	NM_199466	ENSMUSG00000032624	Eml4	4930443C24Rik|AI644019	echinoderm microtubule associated protein like 4	protein-coding
unique_peak1-122-15-2-2.4272022498345-3.53487848679804	chr1	61470922	61471571	+	0	NA	Intergenic	Intergenic	35970	NR_040483	77341	Mm.402964	NR_040483	ENSMUSG00000085447	9530026F06Rik	-	RIKEN cDNA 9530026F06 gene	ncRNA
common_peak2-21229-19-9-1.08075923177432-1.37307999835977	chr11	64078939	64079433	+	0	NA	Intergenic	Intergenic	-169648	NM_178870	15478	Mm.340214	NM_178870	ENSMUSG00000047759	Hs3st3a1	3Ost3a|Hs3st3a	heparan sulfate (glucosamine) 3-O-sulfotransferase 3A1	protein-coding
unique_peak2-39946-3-15--2.41398308995928-2.80787975886178	chrX	136067589	136068118	+	0	NA	intron (NM_175326, intron 11 of 13)	intron (NM_175326, intron 11 of 13)	-30026	NM_001254761	66889	Mm.27764	NM_023270	ENSMUSG00000031438	Rnf128	1300002C13Rik|AI987883|GRAIL|Greul1	ring finger protein 128	protein-coding
common_peak2-23455-17-9-0.896368243317676-1.09394599973099	chr15	66891251	66891911	+	0	NA	Intergenic	B4|SINE|B4	-90378	NM_008681	17988	Mm.30837	NM_008681	ENSMUSG00000005125	Ndrg1	CAP43|CMT4D|DRG1|HMSNL|NMSL|Ndr1|Ndrl|PROXY1|RTP|TDD5	N-myc downstream regulated gene 1	protein-coding
common_peak1-14610-12-5-1.06381348436648-1.78669045979184	chr3	52046976	52047626	+	0	NA	Intergenic	MMERGLN-int|LTR|ERV1	-24958	NM_019739	56458	Mm.29891	NM_019739	ENSMUSG00000044167	Foxo1	AI876417|Afxh|FKHR|Fkhr1|Foxo1a	forkhead box O1	protein-coding
unique_peak1-2391-9-0-3.18961340640422-3.01029995663981	chr15	97571794	97572498	+	0	NA	Intergenic	Intergenic	-10310	NM_001168693	19011	Mm.1001	NM_008902	ENSMUSG00000022468	Endou	Pp11r|Tcl-30	endonuclease, polyU-specific	protein-coding
common_peak2-22560-8-13--0.802132504110034-0.562038191119711	chr13	63231490	63232176	+	0	NA	intron (NM_001289926, intron 5 of 15)	intron (NM_001289926, intron 5 of 15)	-109505	NR_110520	72061	Mm.188105	NM_028079	ENSMUSG00000021458	2010111I01Rik	2300006M17Rik|AP-O|Aopep	RIKEN cDNA 2010111I01 gene	protein-coding
common_peak2-21528-35-28-0.573389263334932-0.994385396256653	chr11	95088371	95089375	+	0	NA	Intergenic	Intergenic	-33970	NM_053093	93670	Mm.40085	NM_053093	ENSMUSG00000020872	Tac4	AW489379|PPT-C	tachykinin 4	protein-coding
common_peak1-18524-17-14-0.311405742596519-0.466170754204149	chr8	92361668	92362517	+	0	NA	Intergenic	B4A|SINE|B4	510059	NM_172913	244579	Mm.302755	NM_172913	ENSMUSG00000043668	Tox3	500-9|BC052044|C230068E13|CAGF9|Tnrc9	TOX high mobility group box family member 3	protein-coding
common_peak2-22382-31-43--0.234192947824174-0.398838069828027	chr13	30973548	30974647	+	0	NA	intron (NM_025588, intron 13 of 27)	intron (NM_025588, intron 13 of 27)	65533	NM_153072	210554	Mm.450571	NM_153072	ENSMUSG00000076430	Hus1b	-	Hus1 homolog b (S. pombe)	protein-coding
unique_peak2-33519-5-8--0.874305337448166-1.10484139239135	chr11	75630371	75630917	+	0	NA	Intergenic	Intergenic	-21085	NM_007873	13447	Mm.5137	NM_007873	ENSMUSG00000020848	Doc2b	-	double C2, beta	protein-coding
unique_peak2-38695-6-6--0.241956811677302-0.947717972411649	chr7	102267870	102268313	+	0	NA	Intergenic	RMER19A|LTR|ERVK	-1091056	NM_011858	23966	Mm.254610	NM_011858	ENSMUSG00000048078	Tenm4	Doc4|ELM2|Odz4|R75022|Ten-m4|l(7)-3Rn|l7Rn3|mKIAA1302	teneurin transmembrane protein 4	protein-coding
common_peak1-14228-30-18-0.921747896048288-1.62918185056051	chr2	152734300	152735737	+	0	NA	Intergenic	Intergenic	-2070	NM_001081044	228785	Mm.250604	NM_001081044	ENSMUSG00000027470	Mylk2	9830004H17Rik|BB138278	myosin, light polypeptide kinase 2, skeletal muscle	protein-coding
common_peak2-26399-18-18-0.0649916377847664-0.323898164595606	chr2	57353413	57353919	+	0	NA	Intergenic	Intergenic	262873	NM_010274	14571	Mm.3711	NM_010274	ENSMUSG00000026827	Gpd2	AA408484|AI448216|AU021455|AW494132|GPDH|Gdm1|Gpd-m|Gpdh-m|TISP38	glycerol phosphate dehydrogenase 2, mitochondrial	protein-coding
common_peak1-10042-6-5--0.0195643903408542-0.947717972411649	chr13	16847702	16848190	+	0	NA	Intergenic	Intergenic	741638	NM_008380	16323	Mm.8042	NM_008380	ENSMUSG00000041324	Inhba	-	inhibin beta-A	protein-coding
common_peak1-14814-81-156--0.422571145883062-1.51499933740136	chr3	90508784	90510072	+	0	NA	Intergenic	L1_Rod|LINE|L1	-9785	NM_009114	20202	Mm.2128	NM_009114	ENSMUSG00000056071	S100a9	60B8Ag|AW546964|BEE22|Cagb|GAGB|L1Ag|MRP14|p14	S100 calcium binding protein A9 (calgranulin B)	protein-coding
unique_peak1-1831-10-0-3.35641534500877-3.31132995230379	chr14	37228157	37228691	+	0	NA	Intergenic	Intergenic	320273	NM_175008	218921	Mm.212464	NM_175008	ENSMUSG00000096405	4930474N05Rik	-	RIKEN cDNA 4930474N05 gene	protein-coding
common_peak1-19241-53-85--0.285291742286169-0.57422342071824	chr9	108648651	108650001	+	0	NA	3' UTR (NM_008924, exon 11 of 11)	3' UTR (NM_008924, exon 11 of 11)	-48999	NM_029634	76500	Mm.276336	NM_029634	ENSMUSG00000032599	Ip6k2	1500005N04Rik|AW050208|Ihpk2	inositol hexaphosphate kinase 2	protein-coding
common_peak2-29120-17-23--0.366666162516118-0.383878263347744	chr5	123907238	123908089	+	0	NA	3' UTR (NM_133917, exon 17 of 17)	3' UTR (NM_133917, exon 17 of 17)	24447	NM_029594	76399	Mm.75049	NM_029594	ENSMUSG00000029437	Il31	1700013B14Rik	interleukin 31	protein-coding
common_peak2-30782-11-5-0.923731083530457-1.477227296591	chr7	126628217	126628654	+	0	NA	Intergenic	MLT1D|LTR|MaLR	-5659	NM_001278605	22242	Mm.10826	NM_009470	ENSMUSG00000030963	Umod	THP|Urehd1|urehr4	uromodulin	protein-coding
unique_peak2-37800-7-16--1.28837201095215-1.08658567012551	chr5	122989078	122989563	+	0	NA	Intergenic	Intergenic	-37086	NR_027838	11938	Mm.227583	NM_009722	ENSMUSG00000029467	Atp2a2	9530097L16Rik|D5Wsu150e|SERCA2|SERCA2B|mKIAA4195	ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	protein-coding
common_peak1-7610-16-13-0.310908720210457-0.417187467413082	chr1	59236659	59237440	+	0	NA	intron (NM_001159948, intron 22 of 33)	intron (NM_001159948, intron 22 of 33)	-16816	NM_001164682	227157	Mm.474049	NM_145143	ENSMUSG00000079550	Mpp4	Dlg6	membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)	protein-coding
common_peak2-26408-82-50-1.22083780233424-6.60083480567807	chr2	59430868	59432550	+	0	NA	Intergenic	Intergenic	-18390	NM_198294	66860	Mm.27917	NM_198294	ENSMUSG00000035168	Tanc1	1200003E16Rik|Tanc|mKIAA1728	tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1	protein-coding
common_peak1-18979-15-13-0.204809828498052-0.368541233333383	chr9	56417466	56418219	+	0	NA	Intergenic	L1MC1|LINE|L1	115218	NM_181074	235402	Mm.246605	NM_181074	ENSMUSG00000049556	Lingo1	4930471K13Rik|AV148400|LERN1|LINGO-1|Lrrn6a|UNQ201	leucine rich repeat and Ig domain containing 1	protein-coding
common_peak1-13744-34-25-0.681628808860174-1.24799833770813	chr2	32712297	32713661	+	0	NA	Intergenic	Intergenic	-10222	NM_001113569	20910	Mm.278865	NM_009295	ENSMUSG00000026797	Stxbp1	AI317162|AI326233|MMS10-G|Ms10g|Munc-18a|Munc18-1|N-sec1|Rb-sec1|Sxtbp1|Unc18-1|Unc18h|nsec1	syntaxin binding protein 1	protein-coding
common_peak2-21439-6-10--0.894033508256995-1.21398586181642	chr11	86589609	86589973	+	0	NA	intron (NM_026191, intron 13 of 17)	B3|SINE|B2	-18797	NM_001003908	67300	Mm.254588	NM_001003908	ENSMUSG00000047126	Cltc	3110065L21Rik|CHC|R74732	clathrin, heavy polypeptide (Hc)	protein-coding
common_peak2-23867-11-7-0.508693584251613-1.21681515183528	chr15	102571833	102572210	+	0	NA	Intergenic	Intergenic	5319	NR_104334	102216269		NR_104334		Cistr-act	Cistr	chondrogenic regulator lncRNA	ncRNA
common_peak2-21491-7-6--0.00826409175941478-0.97990265578305	chr11	88612406	88612835	+	0	NA	Intergenic	Intergenic	32663	NR_038058	193280	Mm.396842	NR_038058		C030037D09Rik	9330160M04	RIKEN cDNA C030037D09 gene	ncRNA
common_peak1-17968-44-33-0.734429993318196-1.70773054518537	chr7	131409770	131411064	+	0	NA	intron (NM_001252072, intron 1 of 1)	intron (NM_001252072, intron 1 of 1)	283722	NM_001252072	628779	Mm.40210	NM_001252072	ENSMUSG00000078591	Hs3st4	EG628779|Gm6915	heparan sulfate (glucosamine) 3-O-sulfotransferase 4	protein-coding
common_peak2-26252-12-21--0.810655633549659-0.713635438203849	chr2	30061695	30062570	+	0	NA	promoter-TSS (NM_172404)	promoter-TSS (NM_172404)	-913	NM_172404	70266	Mm.216089	NM_172404	ENSMUSG00000039648	Ccbl1	2010009K05Rik|AI182306|Gtk|Kat1|KatI	cysteine conjugate-beta lyase 1	protein-coding
common_peak2-31592-28-34--0.0763238971235038-0.304271119602326	chr8	121590262	121590993	+	0	NA	intron (NM_019707, intron 6 of 13)	L1M3|LINE|L1	-277811	NM_024219	68196	Mm.358714	NM_024219	ENSMUSG00000031839	Hsbp1	0610007A03Rik|AA408769|Hsp25	heat shock factor binding protein 1	protein-coding
common_peak1-16125-17-16-0.130833496954699-0.356936432242225	chr5	66620212	66620985	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-30766	NM_027602	70918	Mm.23166	NM_027602	ENSMUSG00000029206	Nsun7	4921525L17Rik	NOL1/NOP2/Sun domain family, member 7	protein-coding
common_peak2-22610-26-42--0.498365662543636-0.737357778720989	chr13	74639651	74640411	+	0	NA	Intergenic	Intergenic	-8633	NM_146231	235956	Mm.296909	NM_146231		Zfp825	-	zinc finger protein 825	protein-coding
unique_peak1-756-9-0-3.18961340640422-3.01029995663981	chr10	117150600	117151083	+	0	NA	Intergenic	Intergenic	-3027	NM_001288586	17246	Mm.22670	NM_010786	ENSMUSG00000020184	Mdm2	1700007J15Rik|AA415488|Mdm-2	transformed mouse 3T3 cell double minute 2	protein-coding
common_peak1-13718-16-39--1.2036644526193-2.22933157796381	chr2	30807877	30808650	+	0	NA	promoter-TSS (NM_133673)	promoter-TSS (NM_133673)	-258	NM_133673	30934	Mm.249164	NM_133673	ENSMUSG00000026848	Tor1b	2610016F05Rik|DQ1|torsinB	torsin family 1, member B	protein-coding
common_peak2-28470-18-23--0.272043349492805-0.34651636097721	chr4	154011737	154012378	+	0	NA	Intergenic	CpG	-1075	NM_027504	70673	Mm.257785	NM_027504	ENSMUSG00000039410	Prdm16	5730557K01Rik|csp1|mel1	PR domain containing 16	protein-coding
common_peak1-11718-10-7-0.356415345008769-1.12966497611638	chr16	32666101	32666565	+	0	NA	non-coding (NR_033493, exon 2 of 3)	non-coding (NR_033493, exon 2 of 3)	1950	NR_033493	675921	Mm.404316	NR_033493	ENSMUSG00000075265	Tnk2os	ENSMUSG00000075265|Gm10818	tyrosine kinase, non-receptor 2, opposite strand	ncRNA
common_peak2-22511-20-21-0.0286431659538957-0.306080386793804	chr13	54071735	54072606	+	0	NA	Intergenic	MLT1B|LTR|MaLR	77979	NM_001291801	13488	Mm.54161	NM_010076	ENSMUSG00000021478	Drd1a	C030036C15Rik|Drd-1|Drd1|Gpcr15	dopamine receptor D1A	protein-coding
unique_peak2-39933-2-8--2.08737925770563-1.65811743852845	chrX	108832863	108833339	+	0	NA	Intergenic	L1Md_A|LINE|L1	-22413	NM_001290459	245596	Mm.246623	NM_001080549		Hdx	D030011N01Rik|Gm380	highly divergent homeobox	protein-coding
unique_peak2-35601-0-10--4.29956254911151-2.57096726280955	chr17	79713110	79713644	+	0	NA	Intergenic	RLTR20A|LTR|ERVK	41054	NM_026514	260409	Mm.140601	NM_026514	ENSMUSG00000036533	Cdc42ep3	3200001F04Rik|AA986861|Borg2|Cep3|UB1	CDC42 effector protein (Rho GTPase binding) 3	protein-coding
unique_peak2-33316-9-21--1.26981821223308-1.37307999835977	chr11	8625958	8626788	+	0	NA	Intergenic	RMER20B|LTR|ERVK	-61835	NM_001083587	319939	Mm.337820	NM_001083587	ENSMUSG00000020422	Tns3	BC023928|F830010I22Rik|TEM6|Tens1	tensin 3	protein-coding
unique_peak1-6424-11-2-1.92373108353046-2.32232533660526	chr7	90022864	90023381	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	7279	NM_175366	108797	Mm.306789	NM_175366	ENSMUSG00000057706	Mex3b	4931439A04Rik|M-04814|Rkhd3|mKIAA2009	mex3 homolog B (C. elegans)	protein-coding
common_peak2-27301-39-29-0.708870651310635-1.42714050806394	chr3	61340017	61340946	+	0	NA	Intergenic	MER21B|LTR|ERV1	172052	NM_028712	74012	Mm.422674	NM_028712	ENSMUSG00000036894	Rap2b	4021402C18Rik|AA408554	RAP2B, member of RAS oncogene family	protein-coding
unique_peak1-6783-15-2-2.4272022498345-3.53487848679804	chr8	65646528	65647274	+	0	NA	intron (NM_023689, intron 5 of 11)	intron (NM_023689, intron 5 of 11)	216759	NM_023689	72902	Mm.334552	NM_023689	ENSMUSG00000054162	Spock3	2900045C01Rik|AI428471|mKIAA4039	sparc/osteonectin, cwcv and kazal-like domains proteoglycan 3	protein-coding
common_peak2-27042-20-12-0.787635066450101-0.949240599462708	chr2	180219652	180220258	+	0	NA	Intergenic	Intergenic	-14726	NM_018766	18216	Mm.301712	NM_018766	ENSMUSG00000027568	Ntsr1	NT-1R|NTR-1|NTR1	neurotensin receptor 1	protein-coding
common_peak1-18379-21-17-0.399564263823923-0.561823156887258	chr8	70682129	70683069	+	0	NA	Intergenic	Intergenic	-117828	NM_028182	72281	Mm.40974	NM_028182	ENSMUSG00000053886	Sh2d4a	2210402M20Rik|SH2A	SH2 domain containing 4A	protein-coding
common_peak2-20131-54-95--0.411876739091422-0.9910708353943	chr1	166001306	166002666	+	0	NA	intron (NM_011346, intron 6 of 8)	intron (NM_011346, intron 6 of 8)	9779	NM_001164059	20343	Mm.1461	NM_011346	ENSMUSG00000026581	Sell	AI528707|CD62L|L-selectin|LECAM-1|Lnhr|Ly-22|Ly-m22|Lyam-1|Lyam1	selectin, lymphocyte	protein-coding
common_peak1-17317-20-11-0.903112283870037-1.11267835143409	chr6	145111082	145111948	+	0	NA	intron (NM_001281980, intron 11 of 18)	intron (NM_001281980, intron 11 of 18)	41256	NM_008511	16970	Mm.843	NM_008511	ENSMUSG00000030263	Lrmp	D6Int3|D6Int4|D6Int5|D6Int7|D6Int8|Jaw1	lymphoid-restricted membrane protein	protein-coding
common_peak2-21216-12-29--1.25811461052088-1.65862513589797	chr11	62077025	62077578	+	0	NA	intron (NM_007413, intron 1 of 1)	intron (NM_007413, intron 1 of 1)	14815	NM_007413	11541	Mm.40740	NM_007413	ENSMUSG00000018500	Adora2b	A2BAR|A2BR|A2b|AA2BR|AI480866|AI605384	adenosine A2b receptor	protein-coding
unique_peak1-6350-17-5-1.63333383748388-2.19184853030482	chr7	63754807	63755624	+	0	NA	intron (NM_021879, intron 23 of 23)	ORR1B1|LTR|MaLR	260074	NM_021879	18431	Mm.137052	NM_021879	ENSMUSG00000030450	Oca2	D7H15S12|D7Icr28RN|D7Nic1|p	oculocutaneous albinism II	protein-coding
unique_peak2-37348-0-6--3.64748585253182-1.56314192529759	chr4	133376069	133376482	+	0	NA	Intergenic	Intergenic	54371	NM_001285506	20111	Mm.301827	NM_009097	ENSMUSG00000003644	Rps6ka1	Mapkapk-1a|Rsk|Rsk-1|Rsk1|S6K-alpha-1|p90-Rsk1|p90Rsk1|p90S6K|p90rsk	ribosomal protein S6 kinase polypeptide 1	protein-coding
unique_peak1-3136-8-0-3.00522241794757-2.70926996097583	chr18	36386546	36387073	+	0	NA	Intergenic	L1ME1|LINE|L1	-29995	NM_001167891	100042150	Mm.380390	NM_001167891	ENSMUSG00000060275	Nrg2	Don1|NTAK	neuregulin 2	protein-coding
common_peak2-28278-14-7-0.899216160357645-0.947446088118041	chr4	129513873	129514338	+	0	NA	intron (NM_001164745, intron 1 of 5)	B1_Mus1|SINE|Alu	16153	NM_001164745	19244	Mm.193688	NM_008974	ENSMUSG00000028788	Ptp4a2	Prl-2	protein tyrosine phosphatase 4a2	protein-coding
common_peak2-23821-113-109-0.66731003217205-3.6622869865054	chr15	101283711	101284826	+	0	NA	TTS (NM_025487)	TTS (NM_025487)	6092	NM_025487	66322	Mm.158111	NM_025487	ENSMUSG00000063971	1700011A15Rik	-	RIKEN cDNA 1700011A15 gene	protein-coding
common_peak2-19522-46-48-0.283286099133593-0.591158351830189	chr1	24099435	24100876	+	0	NA	intron (NM_026604, intron 1 of 20)	intron (NM_026604, intron 1 of 20)	7025	NM_026604	68187	Mm.87130	NM_026604	ENSMUSG00000026153	Fam135a	4921533L14Rik|AI256732|AI835491	family with sequence similarity 135, member A	protein-coding
unique_peak2-32829-2-5--1.50241675698448-1.08602067057793	chr1	189784256	189784670	+	0	NA	intron (NM_001243792, intron 2 of 7)	intron (NM_001243792, intron 2 of 7)	-37243	NM_011935	26381	Mm.89989	NM_011935	ENSMUSG00000026610	Esrrg	ERR3|Errg|NR3B3|mKIAA0832	estrogen-related receptor gamma	protein-coding
common_peak2-24959-73-114--0.153095044519153-0.422164006607571	chr18	3382685	3383772	+	0	NA	promoter-TSS (NM_029402)	promoter-TSS (NM_029402)	5	NM_029402	71745	Mm.291707	NM_029402	ENSMUSG00000024231	Cul2	1300003D18Rik|4932411N15Rik|AI327301|mKIAA4106	cullin 2	protein-coding
common_peak2-26963-28-25-0.352519401680371-0.541406350295756	chr2	165886254	165887278	+	0	NA	intron (NM_008679, intron 17 of 22)	B3|SINE|B2	68629	NM_008679	17979	Mm.469663	NM_008679	ENSMUSG00000027678	Ncoa3	2010305B15Rik|AW321064|Actr|Aib1|KAT13B|Rac3|Src3|Tram-1|Tram1|bHLHe42|p/Cip|pCip	nuclear receptor coactivator 3	protein-coding
common_peak2-29061-55-55-0.397264949095098-0.910921989990114	chr5	117115399	117116487	+	0	NA	Intergenic	Intergenic	-74117	NM_026886	68955	Mm.146779	NM_026886	ENSMUSG00000063919	Srrm4	1500001A10Rik|B230202K19Rik|bv|mKIAA1853|nSR100	serine/arginine repetitive matrix 4	protein-coding
common_peak1-9324-9-14--0.717277189204299-0.53895475198017	chr11	95086121	95086701	+	0	NA	Intergenic	Intergenic	-36432	NM_053093	93670	Mm.40085	NM_053093	ENSMUSG00000020872	Tac4	AW489379|PPT-C	tachykinin 4	protein-coding
common_peak1-9108-53-43-0.681541393778631-1.80978279797654	chr11	72214764	72215894	+	0	NA	intron (NM_177776, intron 4 of 7)	intron (NM_177776, intron 4 of 7)	9886	NM_177776	276829	Mm.46732	NM_177776	ENSMUSG00000045667	Smtnl2	D130058I21Rik	smoothelin-like 2	protein-coding
unique_peak1-2177-7-1-1.79909083029819-1.80617997398389	chr15	62104607	62105073	+	0	NA	Intergenic	Intergenic	-53834	NR_003523	67552	Mm.484027	NM_026230		H2afy3	4933432H23Rik	H2A histone family, member Y3	pseudo
unique_peak1-6832-8-3-1.00522241794757-1.39487600375387	chr8	79608566	79609037	+	0	NA	intron (NM_001083906, intron 2 of 8)	intron (NM_001083906, intron 2 of 8)	182394	NM_001083906	110784	Mm.324393	NM_001083906	ENSMUSG00000031618	Nr3c2	MR|Mlr	nuclear receptor subfamily 3, group C, member 2	protein-coding
common_peak2-20216-28-41--0.339358302957298-0.489200556185773	chr1	179847954	179848871	+	0	NA	Intergenic	L1Md_A|LINE|L1	-73154	NM_001034899	545391	Mm.442974	NM_001034899	ENSMUSG00000091476	Gm16432	EG545391|EG666250	predicted gene 16432	protein-coding
common_peak2-25348-53-120--0.777890224858666-3.06147830793772	chr18	79108754	79110444	+	0	NA	intron (NM_053099, intron 3 of 5)	intron (NM_053099, intron 3 of 5)	196531	NM_053099	240427	Mm.312871	NM_053099	ENSMUSG00000024548	Setbp1	C130092E12|Seb|mKIAA0437	SET binding protein 1	protein-coding
common_peak1-12061-27-61--0.962650359491639-2.29782461879204	chr17	23676909	23677600	+	0	NA	Intergenic	Intergenic	23939	NM_001033496	449521	Mm.268582	NM_001033496	ENSMUSG00000071256	Zfp213	BC038178|D17Ertd197e	zinc finger protein 213	protein-coding
common_peak2-21328-24-49--0.850646287007008-1.56058662248874	chr11	75587854	75588975	+	0	NA	intron (NM_007873, intron 6 of 8)	PB1D10|SINE|Alu	21145	NM_007873	13447	Mm.5137	NM_007873	ENSMUSG00000020848	Doc2b	-	double C2, beta	protein-coding
unique_peak1-2140-12-3-1.64877598508764-2.36932189928148	chr15	57907142	57907784	+	0	NA	intron (NM_009572, intron 1 of 3)	CpG	600	NM_001042438	22770	Mm.244931	NM_009572	ENSMUSG00000022361	Zhx1	-	zinc fingers and homeoboxes 1	protein-coding
common_peak1-8217-9-12--0.510826311736872-0.394412252720706	chr10	8890062	8890658	+	0	NA	Intergenic	Ricksha_c|DNA|MuDR	-284492	NM_175155	70097	Mm.338275	NM_175155	ENSMUSG00000015305	Sash1	1100001C18Rik|2500002E12Rik|A330076K04Rik|mKIAA0790	SAM and SH3 domain containing 1	protein-coding
unique_peak1-4762-19-10-0.943255708024389-1.16735254179725	chr3	122047852	122048901	+	0	NA	Intergenic	MIR|SINE|MIR	-51755	NR_030439	791077		NR_030439	miRBase:MI0004605	Mir760	Mirn760|mir-760|mmu-mir-760	microRNA 760	ncRNA
common_peak2-25933-101-123-0.299817926349545-1.01051977106132	chr19	46960770	46962597	+	0	NA	non-coding (NR_028353, exon 19 of 19)	non-coding (NR_028353, exon 19 of 19)	75158	NM_029810	76952	Mm.40965	NM_029810	ENSMUSG00000025041	Nt5c2	2010002I23Rik|CnII|ENSMUSG00000025039|Gm9751|Gmp|Nt5b|Pnt5|cN-II	5'-nucleotidase, cytosolic II	protein-coding
unique_peak1-3629-14-5-1.31425365963649-1.4372489031793	chr19	37377702	37378316	+	0	NA	intron (NM_031156, intron 11 of 23)	intron (NM_031156, intron 11 of 23)	27094	NM_031156	15925	Mm.28366	NM_031156	ENSMUSG00000056999	Ide	1300012G03Rik|4833415K22Rik|AA675336|AI507533	insulin degrading enzyme	protein-coding
common_peak1-13185-49-30-1.05208751263831-3.03298732626517	chr19	18630420	18632512	+	0	NA	Intergenic	Intergenic	74837	NM_017375	20409	Mm.172222	NM_017375		Ostf1	C78236|SH3P2|Sh3d3	osteoclast stimulating factor 1	protein-coding
common_peak1-12789-13-13--0.0288828914198356-0.309074325783021	chr18	64078083	64078813	+	0	NA	intron (NM_001014981, intron 22 of 27)	Lx7|LINE|L1	210099	NM_001014981	104082	Mm.30850	NM_001014981	ENSMUSG00000040560	Wdr7	AI462727|TRAG|mKIAA0541	WD repeat domain 7	protein-coding
unique_peak1-3706-29-14-1.20539948500659-2.32006591355686	chr19	44280470	44281598	+	0	NA	intron (NM_024450, intron 1 of 5)	B1_Mur3|SINE|Alu	3256	NM_024450	30049	Mm.480594	NM_024450	ENSMUSG00000025202	Scd3	4930513N16Rik	stearoyl-coenzyme A desaturase 3	protein-coding
common_peak1-8834-68-83-0.177643356519535-0.476832982524219	chr11	23770285	23771592	+	0	NA	intron (NM_172555, intron 13 of 21)	intron (NM_172555, intron 13 of 21)	24332	NM_172555	216578	Mm.470599	NM_172555	ENSMUSG00000020273	Papolg	9630006B20Rik	poly(A) polymerase gamma	protein-coding
common_peak1-10909-14-19--0.422711934529718-0.403453972741636	chr15	3996103	3996811	+	0	NA	intron (NM_024188, intron 3 of 16)	L1_Mus4|LINE|L1	-19051	NR_028266	414066	Mm.394461	NR_028266		BC037032	-	cDNA Sequence BC037032	ncRNA
common_peak1-17293-88-96-0.415499566983405-1.3558234454049	chr6	136826988	136828376	+	0	NA	Intergenic	Intergenic	-3356	NM_008597	17313	Mm.243085	NM_008597	ENSMUSG00000030218	Mgp	Mglap	matrix Gla protein	protein-coding
common_peak2-30087-14-23--0.685746340363512-0.669502273696327	chr6	134802903	134803425	+	0	NA	intron (NM_177687, intron 4 of 4)	ID_B1|SINE|B4	22947	NM_177687	232430	Mm.267010	NM_177687		Crebl2	AI046348|B230205M03	cAMP responsive element binding protein-like 2	protein-coding
unique_peak1-6678-13-0-3.77847203063777-4.51544993495972	chr8	23516768	23517467	+	0	NA	Intergenic	Intergenic	-4695	NM_020560	57312	Mm.289402	NM_020560	ENSMUSG00000031533	Mrps31	1500002D03Rik|AA960481|Imogen38|Imogen44	mitochondrial ribosomal protein S31	protein-coding
common_peak2-31041-26-56--0.904990922006279-2.03490996975666	chr8	14608047	14609409	+	0	NA	intron (NM_172910, intron 4 of 15)	intron (NM_172910, intron 4 of 15)	-279808	NM_012000	26889	Mm.254027	NM_012000	ENSMUSG00000026317	Cln8	mnd	ceroid-lipofuscinosis, neuronal 8	protein-coding
common_peak1-9646-18-31--0.687080848771648-0.820293215674341	chr12	75595283	75596175	+	0	NA	Intergenic	MLT1F2|LTR|MaLR	197268	NM_198866	386753	Mm.341686	NM_198866	ENSMUSG00000029878	Dbpht2	Spot2	DNA binding protein with his-thr domain	protein-coding
unique_peak2-38703-8-18--1.24270509549601-1.15812782348128	chr7	105738696	105739317	+	0	NA	TTS (NM_172280)	TTS (NM_172280)	66073	NM_172280	233545	Mm.387819	NM_172280	ENSMUSG00000035401	2210018M11Rik	2310016L09Rik|AU019521|AU019557|Emsy	RIKEN cDNA 2210018M11 gene	protein-coding
unique_peak2-39365-10-20--1.03590207776999-1.03889213727317	chr9	13297431	13298425	+	0	NA	Intergenic	B4A|SINE|B4	63347	NR_028271	18689	Mm.41972	NM_008835		Phxr4	Sp5	per-hexamer repeat gene 4	ncRNA
common_peak1-12205-80-96-0.250662924182224-0.673051025414746	chr17	33759585	33760721	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-5884	NR_034153	328801	Mm.181488	NM_026712	ENSMUSG00000073423	Zfp414	0610030H11Rik|Znf414	zinc finger protein 414	protein-coding
common_peak2-28309-8-7-0.00522241794757061-1.00793137938329	chr4	133103668	133104123	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-1953	NM_010948	18221	Mm.69	NM_010948	ENSMUSG00000028851	Nudc	SIG-92|Silg92	nuclear distribution gene C homolog (Aspergillus)	protein-coding
common_peak2-29245-39-56--0.217128767245588-0.402440571782907	chr5	139478556	139480133	+	0	NA	Intergenic	Intergenic	-8437	NM_008808	18590	Mm.2675	NM_008808	ENSMUSG00000025856	Pdgfa	-	platelet derived growth factor, alpha	protein-coding
common_peak1-16365-22-12-0.946844386946312-1.31435121412491	chr5	122511001	122512036	+	0	NA	Intergenic	(TATATG)n|Simple_repeat|Simple_repeat	-13684	NM_007804	13048	Mm.156172	NM_007804	ENSMUSG00000042589	Cux2	1700051K22Rik|Cutl2|Cux-2|ENSMUSG00000072641	cut-like homeobox 2	protein-coding
unique_peak1-5428-9-2-1.60465090568306-1.87199725847353	chr5	113882491	113883025	+	0	NA	Intergenic	B4A|SINE|B4	-36709	NM_177292	320916	Mm.102783	NM_177292	ENSMUSG00000063430	Wscd2	4933413A10Rik|C530024P05Rik|Gm450	WSC domain containing 2	protein-coding
common_peak2-29587-66-68-0.409959207647672-1.08571825676824	chr6	50381469	50382890	+	0	NA	intron (NM_001163645, intron 1 of 21)	intron (NM_001163645, intron 1 of 21)	23990	NM_001163645	71720	Mm.44153	NM_027881	ENSMUSG00000029822	Osbpl3	1200014M06Rik|6720421I08Rik|A530055M08|ORP3|OSBP3	oxysterol binding protein-like 3	protein-coding
unique_peak2-35477-1-6--2.43441193227435-1.56314192529759	chr17	44663399	44663686	+	0	NA	intron (NR_073425, intron 5 of 5)	MLT2F|LTR|ERVL	209583	NR_073425	12393	Mm.391013	NM_009820	ENSMUSG00000039153	Runx2	AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a	runt related transcription factor 2	protein-coding
common_peak2-24255-14-7-0.899216160357645-0.947446088118041	chr16	92610582	92611068	+	0	NA	intron (NM_001111022, intron 6 of 6)	intron (NM_001111022, intron 6 of 6)	86749	NM_001111023	12394	Mm.4081	NM_009821	ENSMUSG00000022952	Runx1	AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b	runt related transcription factor 1	protein-coding
common_peak1-8851-14-12-0.198776442216552-0.373562084705529	chr11	31157036	31157771	+	0	NA	Intergenic	L1_Mus3|LINE|L1	112658	NM_011491	20856	Mm.32506	NM_011491		Stc2	AW125853|Stc2l|mustc2	stanniocalcin 2	protein-coding
unique_peak1-2134-10-2-1.77145284428761-2.09384600808989	chr15	55198048	55198434	+	0	NA	intron (NM_181277, intron 8 of 47)	Lx|LINE|L1	58936	NM_181277	12818	Mm.297859	NM_181277	ENSMUSG00000022371	Col14a1	5730412L22Rik|AW108078	collagen, type XIV, alpha 1	protein-coding
unique_peak1-1716-9-1-2.18961340640422-2.31132995230379	chr13	95405262	95405838	+	0	NA	Intergenic	Intergenic	-153348	NM_009321	21371	Mm.379025	NM_009321	ENSMUSG00000042043	Tbca	Tbca13	tubulin cofactor A	protein-coding
unique_peak1-4836-19-7-1.40268732666169-1.89173646618542	chr3	148958595	148959283	+	0	NA	Intergenic	Intergenic	21238	NR_040591	381482	Mm.393866	NR_040591		Gm1653	-	predicted gene 1653	ncRNA
common_peak2-31421-30-44--0.322177686837802-0.475038482441584	chr8	94678012	94678687	+	0	NA	Intergenic	B4A|SINE|B4	201670	NR_110452	71296	Mm.86664	NR_033641	ENSMUSG00000031736	Crnde	4933436C20Rik	colorectal neoplasia differentially expressed (non-protein coding)	ncRNA
unique_peak2-35901-2-7--1.91745425626332-1.45399745587252	chr19	4100436	4100804	+	0	NA	promoter-TSS (NM_008851)	promoter-TSS (NM_008851)	-2	NM_008851	18739	Mm.1860	NM_008851	ENSMUSG00000024851	Pitpnm1	DRES9|Mpt-1|Nir-2|PITPnm 1|Pitpnm|R75447|Rd9|RdgB|RdgB1	phosphatidylinositol transfer protein, membrane-associated 1	protein-coding
common_peak2-22032-21-40--0.788062739351848-1.17890083738706	chr12	69158492	69159142	+	0	NA	Intergenic	MURVY-LTR|LTR|ERV1	-388559	NR_033146	100316870	Mm.379794	NR_033146		Gm17821	-	DDB1 and CUL4 associated factor 5 pseudogene	pseudo
common_peak2-31338-15-10-0.552733131918359-0.604422558181019	chr8	83899993	83900601	+	0	NA	intron (NM_001297596, intron 1 of 24)	intron (NM_001297596, intron 1 of 24)	33836	NM_001297593	234515	Mm.324468	NM_001024617	ENSMUSG00000037940	Inpp4b	E130107I17Rik	inositol polyphosphate-4-phosphatase, type II	protein-coding
common_peak1-12389-27-24-0.347689761120511-0.550049347815233	chr17	70728001	70728955	+	0	NA	Intergenic	Intergenic	-45654	NM_177639	224997	Mm.311840	NM_027712	ENSMUSG00000003279	Dlgap1	4933422O14Rik|9630002F18|AI845682|AI848168|BB075781|D17Bwg0511e|GKAP/SAPAP|GKPA/SAPAP|Gkap|Sapap1|mKIAA4162	discs, large (Drosophila) homolog-associated protein 1	protein-coding
unique_peak2-37322-5-6--0.511735258063458-0.947717972411649	chr4	126414513	126414788	+	0	NA	Intergenic	Intergenic	-1137	NM_198960	332937	Mm.331881	NM_198960	ENSMUSG00000042477	Tfap2e	AI505200|AP-2e|Tcfap2e	transcription factor AP-2, epsilon	protein-coding
common_peak1-10029-17-26--0.53659116395843-0.538442145997695	chr13	13378180	13378714	+	0	NA	Intergenic	Intergenic	103398	NM_181852	107849	Mm.392548	NM_181852	ENSMUSG00000055360	Prl2c5	MRP-4|Mrpplf4|PLF-4	prolactin family 2, subfamily c, member 5	protein-coding
common_peak1-14104-261-405-0.239669085902154-1.64773921858307	chr2	126674039	126676815	+	0	NA	intron (NM_021450, intron 5 of 38)	intron (NM_021450, intron 5 of 38)	26570	NM_001164325	58800	Mm.244705	NM_021450	ENSMUSG00000027365	Trpm7	2310022G15Rik|4833414K03Rik|5033407O22Rik|CHAK|CHAK1|LTrpC-7|Ltpr7|Ltrpc7|TRPPLIK	transient receptor potential cation channel, subfamily M, member 7	protein-coding
common_peak2-25049-21-7-1.56948926526624-2.44150343356329	chr18	32152588	32153036	+	0	NA	intron (NM_032394, intron 16 of 46)	intron (NM_032394, intron 16 of 46)	-43522	NM_001025381	574402	Mm.391108	NM_001025381	ENSMUSG00000052229	Gpr17	AI853548	G protein-coupled receptor 17	protein-coding
common_peak2-23945-9-10--0.269818212233077-1.05503135781948	chr16	13819230	13819723	+	0	NA	exon (NM_010946, exon 1 of 10)	exon (NM_010946, exon 1 of 10)	106	NM_010946	18203	Mm.380410	NM_010946	ENSMUSG00000022681	Ntan1	-	N-terminal Asn amidase	protein-coding
common_peak1-9784-82-45-1.36970118824872-7.82020973033603	chr12	57541756	57543792	+	0	NA	Intergenic	Intergenic	87633	NR_045082	104798	Mm.310950	NR_045082		E030019B13Rik	AI413669	RIKEN cDNA E030019B13 gene	ncRNA
common_peak2-19540-39-51--0.0846784712219382-0.309716464454027	chr1	92831199	92832815	+	0	NA	exon (NM_053015, exon 8 of 16)	exon (NM_053015, exon 8 of 16)	-17678	NM_001101647	623503	Mm.471593	NM_001101647	ENSMUSG00000090550	Prlh	EG623503	prolactin releasing hormone	protein-coding
common_peak2-26439-10-7-0.356415345008769-1.12966497611638	chr2	69376726	69377030	+	0	NA	intron (NM_001081088, intron 4 of 78)	intron (NM_001081088, intron 4 of 78)	47246	NM_001081088	14725	Mm.23847	NM_001081088	ENSMUSG00000027070	Lrp2	AI315343|AW536255|D230004K18Rik|Gp330|Megalin|b2b1625.2Clo	low density lipoprotein receptor-related protein 2	protein-coding
unique_peak2-36096-3-12--2.11442280810037-2.15846853396659	chr19	58524540	58525118	+	0	NA	intron (NR_104342, intron 4 of 11)	intron (NR_104342, intron 4 of 11)	4255	NM_001285457	14585	Mm.88367	NM_010279	ENSMUSG00000025089	Gfra1	AU042498	glial cell line derived neurotrophic factor family receptor alpha 1	protein-coding
common_peak1-7711-97-105-0.456080616929083-1.69676347006476	chr1	87213424	87214811	+	0	NA	Intergenic	Intergenic	281268	NM_030194	109032	Mm.335802	NM_030194	ENSMUSG00000070034	Sp110	5031415C07Rik|52kDa|5830484A20Rik|ENSMUSG00000075603|Ifi75|Ipr1	Sp110 nuclear body protein	protein-coding
common_peak1-17665-28-44--0.438893976508212-0.643431604871956	chr7	64872145	64873315	+	0	NA	intron (NM_008071, intron 3 of 8)	(CA)n|Simple_repeat|Simple_repeat	26187	NM_008071	14402	Mm.8004	NM_008071	ENSMUSG00000033676	Gabrb3	A230092K12Rik|AW049585|Cp1|Gabrb-3|beta3	gamma-aminobutyric acid (GABA) A receptor, subunit beta 3	protein-coding
common_peak1-8396-24-29--0.113680692840802-0.304839791830752	chr10	67284474	67285306	+	0	NA	Intergenic	RLTR12B|LTR|ERVK	90520	NM_178679	216049	Mm.268346	NM_178679	ENSMUSG00000037855	Zfp365	AI839779|AV340892|DBZ|Su48|Znf365|talanin	zinc finger protein 365	protein-coding
common_peak2-25105-24-24-0.149353712992992-0.367910579842133	chr18	36707712	36708858	+	0	NA	intron (NM_001271547, intron 19 of 19)	MTD|LTR|MaLR	-11972	NM_175375	108857	Mm.482287	NM_175375	ENSMUSG00000024483	Ankhd1	1110004O12Rik|4933432B13Rik|9130019P20Rik|A530027J04Rik|A630021B20Rik|AA571404|Mask|mFLJ00246|mKIAA1085	ankyrin repeat and KH domain containing 1	protein-coding
common_peak1-7776-19-24--0.241168863113038-0.344491671143527	chr1	93635071	93635906	+	0	NA	Intergenic	Intergenic	-62566	NM_007855	13345	Mm.9474	NM_007855	ENSMUSG00000007805	Twist2	Dermo1|bHLHa39	twist basic helix-loop-helix transcription factor 2	protein-coding
unique_peak2-34952-0-7--3.84013093047421-1.80617997398389	chr15	90992510	90992925	+	0	NA	intron (NM_011994, intron 7 of 9)	intron (NM_011994, intron 7 of 9)	29521	NM_011994	26874	Mm.295456	NM_011994	ENSMUSG00000055782	Abcd2	ABC39|ALDL1|ALDR|ALDRP	ATP-binding cassette, sub-family D (ALD), member 2	protein-coding
unique_peak1-5682-11-0-3.50869358425161-3.61235994796777	chr6	32390526	32391017	+	0	NA	intron (NM_175750, intron 3 of 31)	ORR1E|LTR|MaLR	-70370	NR_040277	319849	Mm.440860	NR_040277	ENSMUSG00000086763	Plxna4os1	B230378P21Rik	plexin A4, opposite strand 1	ncRNA
common_peak2-24120-14-19--0.422711934529718-0.403453972741636	chr16	33580444	33581263	+	0	NA	intron (NM_134251, intron 4 of 12)	intron (NM_134251, intron 4 of 12)	62172	NM_001083902	171286	Mm.35253	NM_134251	ENSMUSG00000035506	Slc12a8	CCC9|E330020C02Rik	solute carrier family 12 (potassium/chloride transporters), member 8	protein-coding
unique_peak2-33870-0-12--4.5405706486153-3.1004765869889	chr12	23024501	23025148	+	0	NA	intron (NR_015504, intron 2 of 3)	intron (NR_015504, intron 2 of 3)	34127	NR_015504	69732	Mm.391403	NM_028362	ENSMUSG00000073164	2410018L13Rik	2810480C08Rik	RIKEN cDNA 2410018L13 gene	ncRNA
common_peak2-22330-10-6-0.549060422951165-1.21398586181642	chr13	23550814	23551207	+	0	NA	exon (NM_013483, exon 8 of 8)	exon (NM_013483, exon 8 of 8)	6760	NM_013483	12231	Mm.1420	NM_013483	ENSMUSG00000000706	Btn1a1	Btn	butyrophilin, subfamily 1, member A1	protein-coding
common_peak2-29838-9-8-0.0196884049619079-1.03275496310833	chr6	94657327	94657842	+	0	NA	Intergenic	(CCA)n|Simple_repeat|Simple_repeat	-7445	NM_008377	16206	Mm.245210	NM_008377	ENSMUSG00000030029	Lrig1	D6Bwg0781e|Img|LIG-1	leucine-rich repeats and immunoglobulin-like domains 1	protein-coding
common_peak2-23827-21-11-0.984526764545079-1.3750876294627	chr15	101333100	101333614	+	0	NA	promoter-TSS (NR_002872)	promoter-TSS (NR_002872)	-890	NR_002872	574415	Mm.491077	NR_002872		Gm6042	EG574415|Kb32p	type II keratin Kb32P	pseudo
unique_peak2-34922-8-21--1.45420920068973-1.61268301619756	chr15	85037187	85037786	+	0	NA	intron (NM_010180, intron 1 of 16)	intron (NM_010180, intron 1 of 16)	1048	NM_010180	14114	Mm.297992	NM_010180	ENSMUSG00000006369	Fbln1	-	fibulin 1	protein-coding
common_peak1-10739-42-44-0.250476231537509-0.522994948702178	chr14	65953044	65954280	+	0	NA	Intergenic	Intergenic	-23851	NM_199029	380912	Mm.270087	NM_199029	ENSMUSG00000034522	Zfp395	BC053701|Gm910	zinc finger protein 395	protein-coding
common_peak1-8655-10-16--0.73104749624157-0.604422558181019	chr10	127667118	127667641	+	0	NA	exon (NM_008600, exon 4 of 4)	exon (NM_008600, exon 4 of 4)	-1740	NM_001164080	21853	Mm.6458	NM_011589	ENSMUSG00000039994	Timeless	C77407|Debt69|tim	timeless circadian clock 1	protein-coding
unique_peak1-4987-13-9-0.456543935750406-0.53895475198017	chr4	114908508	114909201	+	0	NA	Intergenic	MTD-int|LTR|MaLR	-5835	NM_001100183	230639	Mm.466610	NM_001100183		Cyp4a29	Cyp4a29-ps|OTTMUSG00000008612	cytochrome P450, family 4, subfamily a, polypeptide 29	protein-coding
unique_peak1-6704-11-2-1.92373108353046-2.32232533660526	chr8	34456512	34457110	+	0	NA	intron (NM_011721, intron 3 of 33)	Lx7|LINE|L1	39188	NM_001122822	22427	Mm.228805	NM_011721	ENSMUSG00000031583	Wrn	AI846146	Werner syndrome homolog (human)	protein-coding
common_peak2-21620-34-62--0.595211396498651-1.14143720324845	chr11	100938632	100939533	+	0	NA	promoter-TSS (NM_010475)	promoter-TSS (NM_010475)	-643	NM_010475	15485	Mm.188939	NM_010475	ENSMUSG00000019301	Hsd17b1	17HSDB1|17beta-HSD|E2DH|Hsd17ba	hydroxysteroid (17-beta) dehydrogenase 1	protein-coding
common_peak2-26674-8-14--0.901668177660948-0.660903317613906	chr2	122630676	122631255	+	0	NA	intron (NR_027888, intron 7 of 9)	intron (NR_027888, intron 7 of 9)	23230	NM_021507	59010	Mm.28986	NM_021507	ENSMUSG00000005803	Sqrdl	0610039J17Rik|4930557M22Rik	sulfide quinone reductase-like (yeast)	protein-coding
common_peak2-20644-26-37--0.320028421285123-0.460129356264038	chr10	81105608	81106336	+	0	NA	exon (NM_027480, exon 17 of 20)	exon (NM_027480, exon 17 of 20)	-5842	NM_001142963	100233208	Mm.327168	NM_001142963		Gm10778	ENSMUSG00000074860	predicted gene 10778	protein-coding
common_peak1-15763-29-51--0.588149637525981-0.951203349073955	chr4	151057157	151058188	+	0	NA	intron (NM_001081557, intron 3 of 23)	intron (NM_001081557, intron 3 of 23)	178205	NM_001081557	100072	Mm.318846	NM_001081557	ENSMUSG00000014592	Camta1	1810059M14Rik|2310058O09Rik|AI316882|AW987475|mKIAA0833	calmodulin binding transcription activator 1	protein-coding
common_peak1-17541-20-36--0.721378581037757-1.04213512323541	chr7	28962523	28963349	+	0	NA	intron (NM_007991, intron 6 of 8)	L2b|LINE|L2	-1566	NM_001037957	13549	Mm.57249	NM_010092	ENSMUSG00000002409	Dyrk1b	Mirk	dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b	protein-coding
unique_peak2-33644-8-10--0.454209200689727-1.078512453669	chr11	98809162	98809728	+	0	NA	intron (NM_001177302, intron 2 of 9)	L1MB8|LINE|L1	8420	NM_001177303	19401	Mm.439744	NM_009024	ENSMUSG00000037992	Rara	Nr1b1|RAR|RARalpha1	retinoic acid receptor, alpha	protein-coding
common_peak1-15779-12-7-0.648775985087639-0.697979855752659	chr4	155174024	155174465	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-3483	NM_025570	66448	Mm.23825	NM_025570	ENSMUSG00000029066	Mrpl20	2610008D01Rik|4930425I20Rik	mitochondrial ribosomal protein L20	protein-coding
common_peak1-14792-12-12--0.0516637330534535-0.309718203022949	chr3	89860802	89861506	+	0	NA	intron (NM_001287087, intron 6 of 8)	B3|SINE|B2	4430	NM_027500	99650	Mm.300083	NM_025762	ENSMUSG00000027942	4933434E20Rik	5730552F22Rik|AI462154|NICE-3|NS5ATP4	RIKEN cDNA 4933434E20 gene	protein-coding
unique_peak1-5194-20-3-2.48807478459119-3.8429424127101	chr5	32741064	32741782	+	0	NA	Intergenic	Intergenic	-19920	NM_172707	19046	Mm.241931	NM_172707		Ppp1cb	1200010B19	protein phosphatase 1, catalytic subunit, beta isoform	protein-coding
common_peak2-24570-65-105--0.235754515086072-0.551832186331982	chr17	29458869	29460717	+	0	NA	intron (NM_023734, intron 2 of 6)	intron (NM_023734, intron 2 of 6)	3966	NM_023734	74116	Mm.30950	NM_023734	ENSMUSG00000024011	Pi16	1200009H11Rik|Cripi|PI-16	peptidase inhibitor 16	protein-coding
common_peak2-28638-32-51--0.421347698921432-0.649502410911277	chr5	29434506	29435584	+	0	NA	Intergenic	Lx8|LINE|L1	-87488	NM_021470	56874	Mm.87352	NM_021470	ENSMUSG00000029130	Rnf32	1700009J01Rik|2700025B22Rik|4930542N22Rik|Lmbr2	ring finger protein 32	protein-coding
common_peak1-12998-40-27-0.851620760693494-1.93089126088446	chr19	4397265	4398696	+	0	NA	promoter-TSS (NM_001001984)	promoter-TSS (NM_001001984)	-903	NM_001001984	225876	Mm.31941	NM_001001984	ENSMUSG00000054611	Kdm2a	100043628|5530401A10Rik|AA589516|AW536790|Cxxc8|Fbl11|Fbl7|Fbxl11|Gm4560|Jhdm1|Jhdm1a|lalina	lysine (K)-specific demethylase 2A	protein-coding
common_peak2-22380-89-110-0.240550888475896-0.69888678845	chr13	30367697	30370132	+	0	NA	Intergenic	MTE2a|LTR|MaLR	-59311	NM_177322	11607	Mm.35062	NM_177322	ENSMUSG00000049115	Agtr1a	1810074K20Rik|AG2S|AI551199|AT1|AT1a|AT2R1|AT2R1A|Agtr-1a|Agtr1|Angtr-1a	angiotensin II receptor, type 1a	protein-coding
common_peak1-14313-12-4-1.32684789020028-2.04196296489515	chr2	163419928	163420443	+	0	NA	Intergenic	Intergenic	-7865	NM_181734	76080	Mm.89828	NM_029512	ENSMUSG00000017679	Ttpal	3110080A02Rik|5830472M02Rik	tocopherol (alpha) transfer protein-like	protein-coding
common_peak2-30441-3-6--1.22133801201688-1.08602067057793	chr7	45016400	45016740	+	0	NA	Intergenic	Intergenic	1503334	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak2-28671-10-9-0.0344872501214071-1.05503135781948	chr5	32033208	32033756	+	0	NA	intron (NM_181282, intron 3 of 11)	intron (NM_181282, intron 3 of 11)	33059	NM_181282	107976	Mm.482126	NM_144541	ENSMUSG00000052139	Bre	6030405P19Rik|AI429776|B830038C02Rik	brain and reproductive organ-expressed protein	protein-coding
common_peak1-13638-9-25--1.51082631173687-2.00244947055753	chr2	25557254	25557749	+	0	NA	intron (NM_153558, intron 4 of 6)	intron (NM_153558, intron 4 of 6)	1907	NM_153558	227627	Mm.44630	NM_153558	ENSMUSG00000062061	Obp2a	BC027556|Lcn13	odorant binding protein 2A	protein-coding
common_peak1-11571-24-14-0.886319307159198-1.33403699391683	chr16	13667449	13668361	+	0	NA	intron (NM_028761, intron 1 of 23)	intron (NM_028761, intron 1 of 23)	358	NM_028761	74108	Mm.182350	NM_028761	ENSMUSG00000022685	Parn	1200003I18Rik|DAN	poly(A)-specific ribonuclease (deadenylation nuclease)	protein-coding
common_peak1-10338-18-10-0.853487532591054-1.03889213727317	chr13	74770075	74770895	+	0	NA	Intergenic	Intergenic	-6835	NM_030711	80898	Mm.83526	NM_030711	ENSMUSG00000021583	Erap1	Arts1|ERAAP|PILSA|PILSAP	endoplasmic reticulum aminopeptidase 1	protein-coding
unique_peak1-5511-13-9-0.456543935750406-0.53895475198017	chr5	136535720	136536353	+	0	NA	exon (NM_027158, exon 3 of 6)	exon (NM_027158, exon 3 of 6)	2899	NM_027158	69665	Mm.75713	NM_027158	ENSMUSG00000006143	Upk3bl	2310043J07Rik	uroplakin 3B-like	protein-coding
common_peak2-29362-14-10-0.439784541720347-0.519648556297791	chr5	151143208	151143720	+	0	NA	intron (NM_172887, intron 4 of 60)	intron (NM_172887, intron 4 of 60)	80959	NM_172887	320365	Mm.216590	NM_172887	ENSMUSG00000056602	Fry	13CDNA73|9330186A19Rik|AF346502|AI462658|C87180|D930046M03|cg003|mKIAA4143	furry homolog (Drosophila)	protein-coding
common_peak2-30237-5-8--0.874305337448166-1.10484139239135	chr7	4792352	4792785	+	0	NA	intron (NM_001290291, intron 1 of 4)	URR1B|DNA|MER1_type	3730	NM_001290291	232813	Mm.44666	NM_172737	ENSMUSG00000053550	Shisa7	-	shisa homolog 7 (Xenopus laevis)	protein-coding
common_peak2-27282-115-228--0.360096827760548-1.64154412998616	chr3	57574664	57577068	+	0	NA	intron (NM_001113413, intron 3 of 9)	RSINE1|SINE|B4	35878	NM_001113413	24017	Mm.274360	NM_011883	ENSMUSG00000036503	Rnf13	2010001H16Rik|Rzf	ring finger protein 13	protein-coding
common_peak2-24451-12-20--0.743541437691122-0.625923329873571	chr17	23563740	23564215	+	0	NA	Intergenic	L1Md_F2|LINE|L1	42207	NM_001104580	619697	Mm.469848	NM_001104580	ENSMUSG00000090966	Vmn2r116	EG619697|V2Rp5	vomeronasal 2, receptor 116	protein-coding
unique_peak2-38049-3-6--1.22133801201688-1.08602067057793	chr6	41577249	41577549	+	0	NA	exon (NM_022413, exon 3 of 15)	exon (NM_022413, exon 3 of 15)	9005	NM_022413	64177	Mm.296889	NM_022413	ENSMUSG00000029868	Trpv6	CAT|CaT1|Cac|Ecac2|Otrpc3	transient receptor potential cation channel, subfamily V, member 6	protein-coding
unique_peak1-2954-10-8-0.186490343566457-1.078512453669	chr17	70834423	70835002	+	0	NA	intron (NM_027712, intron 1 of 9)	intron (NM_027712, intron 1 of 9)	-36738	NM_001128180	224997	Mm.311840	NM_027712	ENSMUSG00000003279	Dlgap1	4933422O14Rik|9630002F18|AI845682|AI848168|BB075781|D17Bwg0511e|GKAP/SAPAP|GKPA/SAPAP|Gkap|Sapap1|mKIAA4162	discs, large (Drosophila) homolog-associated protein 1	protein-coding
common_peak1-16573-9-6-0.382258484346616-1.11707584880836	chr5	146703379	146703863	+	0	NA	Intergenic	L1Md_A|LINE|L1	-12191	NM_007818	13112	Mm.332844	NM_007818	ENSMUSG00000056035	Cyp3a11	AI256190|Cyp3a|IIIAm1|Pcn	cytochrome P450, family 3, subfamily a, polypeptide 11	protein-coding
common_peak1-18739-56-94--0.334259782891705-0.765859175915144	chr8	124020370	124021841	+	0	NA	Intergenic	Intergenic	44749	NM_029597	76405	Mm.165697	NM_029597	ENSMUSG00000031809	1700018B08Rik	1700084O22Rik	RIKEN cDNA 1700018B08 gene	protein-coding
common_peak2-29341-10-8-0.186490343566457-1.078512453669	chr5	148928694	148929120	+	0	NA	intron (NM_029920, intron 4 of 14)	Lx5|LINE|L1	160011	NM_029920	77521	Mm.244177	NM_029920	ENSMUSG00000029651	Mtus2	5730592G18Rik|A730013O20Rik|AU067634|C130038G02Rik|Cazip|Gm763|mKIAA0774	microtubule associated tumor suppressor candidate 2	protein-coding
common_peak1-8234-7-7--0.200909169701811-0.97990265578305	chr10	13501078	13501466	+	0	NA	intron (NM_025446, intron 3 of 5)	intron (NM_025446, intron 3 of 5)	87364	NM_025446	66253	Mm.45755	NM_025446	ENSMUSG00000019806	Aig1	1500031O19Rik|AV064870|AW413422|CGI-103	androgen-induced 1	protein-coding
unique_peak2-39711-6-4-0.24347001549294-0.989110657569874	chr9	118102130	118102387	+	0	NA	Intergenic	Intergenic	-42944	NM_026442	67899	Mm.9953	NM_026442	ENSMUSG00000039163	Cmc1	2010110K16Rik|2010312P05Rik|AI596001	COX assembly mitochondrial protein 1	protein-coding
unique_peak2-36554-0-8--4.01005593191652-2.05605744720049	chr2	167816909	167817377	+	0	NA	intron (NM_001080708, intron 11 of 21)	intron (NM_001080708, intron 11 of 21)	18950	NM_001080708	69553	Mm.68454	NM_001080708	ENSMUSG00000074577	Fam65c	2310033K02Rik|Gm124	family with sequence similarity 65, member C	protein-coding
common_peak2-22517-8-8--0.164702583494742-1.00793137938329	chr13	54609251	54609625	+	0	NA	intron (NM_176987, intron 1 of 9)	L1MEf|LINE|L1	4272	NM_176987	319719	Mm.376151	NM_176987	ENSMUSG00000043183	Simc1	4732471D19Rik	SUMO-interacting motifs containing 1	protein-coding
common_peak2-25301-107-206--0.339440024825929-1.33852896241698	chr18	73572619	73574714	+	0	NA	Intergenic	Lx8|LINE|L1	-158693	NM_001039214	240396	Mm.24131	NM_001039214	ENSMUSG00000037253	Mex3c	A130001D14Rik|BC035207|BM-013|Rkhd2	mex3 homolog C (C. elegans)	protein-coding
common_peak1-16277-16-8-0.948338640825749-1.02063122982878	chr5	109558627	109559298	+	0	NA	Intergenic	RLTR17|LTR|ERVK	-32079	NM_001104623	627569	Mm.469884	NM_001104623	ENSMUSG00000090688	Vmn2r12	EG627569|Gm6769	vomeronasal 2, receptor 12	protein-coding
unique_peak1-4562-9-1-2.18961340640422-2.31132995230379	chr3	51900881	51901400	+	0	NA	intron (NM_001004176, intron 1 of 4)	intron (NM_001004176, intron 1 of 4)	7788	NM_001004176	433586	Mm.234972	NM_001004176	ENSMUSG00000061143	Maml3	AV234550|BC049812|Mam-2|mKIAA1816	mastermind like 3 (Drosophila)	protein-coding
common_peak2-22456-27-49--0.652310238879489-1.08158034290998	chr13	43559495	43560633	+	0	NA	intron (NM_019930, intron 1 of 13)	Lx8|LINE|L1	16278	NM_019930	56705	Mm.148781	NM_019930	ENSMUSG00000038546	Ranbp9	IBAP-1|Ibap1|RanBPM	RAN binding protein 9	protein-coding
common_peak2-31755-17-15-0.218296338205038-0.403453972741633	chr9	20887717	20888268	+	0	NA	intron (NR_038081, intron 3 of 16)	intron (NR_038081, intron 3 of 16)	-7960	NR_106050	102465656		NR_106050		Mir7082	mmu-mir-7082	microRNA mir-7082	ncRNA
unique_peak2-34254-5-12--1.40482005414695-1.62698961692433	chr13	62129540	62130244	+	0	NA	Intergenic	Intergenic	-101358	NM_001039239	630579	Mm.440905	NM_001039239	ENSMUSG00000074867	Zfp808	EG630579|Gm7036	zinc finger protein 80	protein-coding
common_peak2-27690-22-26--0.107603397076064-0.30528805757448	chr3	121468819	121469828	+	0	NA	intron (NM_008991, intron 20 of 22)	PB1D7|SINE|Alu	42868	NM_010171	14066	Mm.273188	NM_010171	ENSMUSG00000028128	F3	AA409063|CD142|Cf-3|Cf3|TF	coagulation factor III	protein-coding
common_peak1-14485-13-15--0.221527969362231-0.308519316180257	chr3	5272031	5272464	+	0	NA	intron (NM_030708, intron 3 of 10)	intron (NM_030708, intron 3 of 10)	-51424	NR_045905	72608	Mm.384359	NR_045905		2700069I18Rik	-	RIKEN cDNA 2700069I18 gene	ncRNA
common_peak1-18201-26-42--0.498365662543636-0.737357778720989	chr8	23034894	23035756	+	0	NA	Intergenic	Intergenic	7857	NM_139222	246082	Mm.390015	NM_139222	ENSMUSG00000048500	Defb15	BD-15	defensin beta 15	protein-coding
common_peak2-21198-32-45--0.244469936837353-0.394172396164276	chr11	60726591	60727812	+	0	NA	promoter-TSS (NM_025294)	promoter-TSS (NM_025294)	93	NM_025294	24083	Mm.22780	NM_025294	ENSMUSG00000018931	Natd1	AI256713|F3-2|Gm16515|Gtlf3b	N-acetyltransferase domain containing 1	protein-coding
unique_peak2-39954-5-7--0.704380336005853-1.01466476204226	chrX	140520142	140520569	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-67883	NR_040271	319764	Mm.208482	NR_040271	ENSMUSG00000085139	A730046J19Rik	-	RIKEN cDNA A730046J19 gene	ncRNA
unique_peak1-3100-15-1-3.01216475055566-4.18809100057339	chr18	25694321	25695058	+	0	NA	intron (NM_001146293, intron 3 of 12)	intron (NM_001146293, intron 3 of 12)	217795	NM_133195	108013	Mm.266435	NM_133195	ENSMUSG00000024268	Celf4	A230070D14Rik|BRUNOL-4|Brul4|Brunol4|C130060B05Rik	CUGBP, Elav-like family member 4	protein-coding
common_peak2-31377-28-25-0.352519401680371-0.541406350295756	chr8	85080096	85081154	+	0	NA	Intergenic	Intergenic	-154140	NM_008357	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
unique_peak2-36215-9-18--1.05831410703937-0.965105923112245	chr2	35256219	35256914	+	0	NA	3' UTR (NM_010283, exon 9 of 9)	3' UTR (NM_010283, exon 9 of 9)	-3872	NM_001272040	74854	Mm.159338	NM_001080709	ENSMUSG00000079421	4930402F06Rik	-	RIKEN cDNA 4930402F06 gene	protein-coding
common_peak2-29661-53-33-1.05351017116559-3.38698503266952	chr6	71908400	71909267	+	0	NA	intron (NM_009088, intron 20 of 33)	IAPEz-int|LTR|ERVK	49786	NM_009088	20019	Mm.135581	NM_009088	ENSMUSG00000049553	Polr1a	194kDa|3010014K16Rik|RPA194|Rpo1-4|mRPA1	polymerase (RNA) I polypeptide A	protein-coding
common_peak2-22073-13-16--0.30899081061257-0.330004445983672	chr12	76368817	76369544	+	0	NA	Intergenic	Intergenic	-40120	NM_023275	80837	Mm.27467	NM_023275	ENSMUSG00000046768	Rhoj	1110005O19Rik|AW210585|Arhj|TC10L|TCL	ras homolog gene family, member J	protein-coding
common_peak2-26752-29-44--0.379563015714564-0.524158758825513	chr2	136890738	136891832	+	0	NA	intron (NM_001038641, intron 6 of 7)	intron (NM_001038641, intron 6 of 7)	50971	NM_013822	16449	Mm.22398	NM_013822	ENSMUSG00000027276	Jag1	ABE2|Gsfabe2|Htu|Ozz|Ser-1	jagged 1	protein-coding
common_peak2-22471-12-16--0.4386868561627-0.368541233333383	chr13	48227773	48228422	+	0	NA	intron (NR_102303, intron 1 of 2)	intron (NR_102303, intron 1 of 2)	-114120	NR_038004	70971	Mm.158514	NR_038004	ENSMUSG00000047324	4931429P17Rik	-	RIKEN cDNA 4931429P17 gene	ncRNA
common_peak2-26837-61-51-0.682309611608249-1.97656708196216	chr2	153161260	153162210	+	0	NA	Intergenic	B1_Mur4|SINE|Alu	9811	NR_040318	72326	Mm.400102	NR_040318	ENSMUSG00000073236	2500004C02Rik	-	RIKEN cDNA 2500004C02 gene	ncRNA
common_peak1-8182-19-20-0.0103699038829257-0.306326795069978	chr10	71237401	71238256	+	0	NA	Intergenic	Intergenic	205610	NR_003644	108950	Mm.212793	NM_175390	ENSMUSG00000043859	1700049L16Rik	-	hematological and neurological expressed 1-like pseudogene	pseudo
common_peak2-27944-12-7-0.648775985087639-0.697979855752659	chr4	32409102	32409614	+	0	NA	Intergenic	Intergenic	-95052	NM_001109661	12014	Mm.491223	NM_007521	ENSMUSG00000040270	Bach2	E030004N02Rik	BTB and CNC homology 2	protein-coding
common_peak1-13703-13-8-0.608547029195456-0.660903317613904	chr2	30453768	30454465	+	0	NA	intron (NM_030137, intron 1 of 1)	intron (NM_030137, intron 1 of 1)	3552	NM_030137	78617	Mm.40413	NM_030137	ENSMUSG00000047363	Cstad	9530039B02Rik	CSA-conditional, T cell activation-dependent protein	protein-coding
common_peak2-27234-35-51--0.269069459678588-0.449053920623485	chr3	52043219	52045156	+	0	NA	Intergenic	Intergenic	-28072	NM_019739	56458	Mm.29891	NM_019739	ENSMUSG00000044167	Foxo1	AI876417|Afxh|FKHR|Fkhr1|Foxo1a	forkhead box O1	protein-coding
common_peak1-12887-18-30--0.641277159158523-0.738267116931589	chr18	80170192	80171081	+	0	NA	Intergenic	MIRb|SINE|MIR	-72998	NM_053117	93737	Mm.24678	NM_053117	ENSMUSG00000056214	Pard6g	2410049N21Rik|Par6a	par-6 family cell polarity regulator gamma	protein-coding
common_peak2-19602-20-26--0.266812717572275-0.373496418836697	chr1	33719754	33720686	+	0	NA	intron (NM_008922, intron 4 of 13)	intron (NM_008922, intron 4 of 13)	6419	NM_008922	19076	Mm.27705	NM_008922	ENSMUSG00000026134	Prim2	AI323589	DNA primase, p58 subunit	protein-coding
unique_peak1-2482-13-1-2.77847203063777-3.64038867156802	chr16	5204296	5204994	+	0	NA	promoter-TSS (NM_013796)	promoter-TSS (NM_013796)	-540	NR_027804	27426	Mm.215641	NM_013796	ENSMUSG00000023143	Nagpa	AI596180|UCE	N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase	protein-coding
common_peak1-14715-30-28-0.311694414364301-0.518746288394487	chr3	79193687	79194754	+	0	NA	intron (NM_001142953, intron 1 of 4)	MTA_Mm|LTR|MaLR	44922	NM_001142953	100233207	Mm.373801	NM_001142953	ENSMUSG00000091685	Gm17359	-	predicted gene, 17359	protein-coding
common_peak1-9681-56-53-0.480708323275775-1.12620916894576	chr12	9029651	9030788	+	0	NA	intron (NM_001159527, intron 23 of 26)	intron (NM_001159527, intron 23 of 26)	-6584	NM_029321	75516	Mm.37581	NM_029321	ENSMUSG00000066637	Ttc32	1700013G20Rik	tetratricopeptide repeat domain 32	protein-coding
common_peak2-26436-13-9-0.456543935750406-0.53895475198017	chr2	66145397	66145989	+	0	NA	intron (NM_018733, intron 17 of 26)	L1Md_F2|LINE|L1	-51019	NM_001290669	73668	Mm.250868	NM_001047604	ENSMUSG00000034848	Ttc21b	2410066K11Rik|Thm1|aln|mKIAA1992	tetratricopeptide repeat domain 21B	protein-coding
common_peak1-14985-12-9-0.326847890200276-0.459837087125828	chr3	107734237	107734799	+	0	NA	intron (NM_026672, intron 1 of 7)	intron (NM_026672, intron 1 of 7)	145	NM_026672	68312	Mm.458189	NM_026672	ENSMUSG00000004035	Gstm7	0610005A07Rik|AI894236|Cd203c	glutathione S-transferase, mu 7	protein-coding
common_peak1-10702-133-163-0.374005580065224-1.74911372281667	chr14	57745024	57746781	+	0	NA	intron (NM_001010937, intron 2 of 2)	ID_B1|SINE|B4	6546	NM_001271663	14623	Mm.25652	NM_008128	ENSMUSG00000040055	Gjb6	AA958971|Cx30|D14Bwg0506e	gap junction protein, beta 6	protein-coding
common_peak2-25286-8-8--0.164702583494742-1.00793137938329	chr18	69919709	69920263	+	0	NA	Intergenic	MTA_Mm-int|LTR|MaLR	-165227	NM_201362	381175	Mm.266831	NM_201362	ENSMUSG00000038903	Ccdc68	BC046343	coiled-coil domain containing 68	protein-coding
common_peak2-23744-9-6-0.382258484346616-1.11707584880836	chr15	97773825	97774279	+	0	NA	Intergenic	Intergenic	-20608	NM_201359	380967	Mm.196630	NM_201359	ENSMUSG00000052369	Tmem106c	AI046681|BC046621|D15Ertd405e	transmembrane protein 106C	protein-coding
common_peak1-10972-9-12--0.510826311736872-0.394412252720706	chr15	28023957	28024306	+	0	NA	Intergenic	Intergenic	-68528	NM_001081302	223435	Mm.485422	NM_001081302	ENSMUSG00000022263	Trio	6720464I07Rik|AA408740|Solo	triple functional domain (PTPRF interacting)	protein-coding
unique_peak1-3486-16-3-2.11826364226806-2.65002542325363	chr19	10691910	10692612	+	0	NA	intron (NM_015735, intron 10 of 26)	B4A|SINE|B4	12146	NM_015735	13194	Mm.289915	NM_015735	ENSMUSG00000024740	Ddb1	127kDa|AA408517|p127-Ddb1	damage specific DNA binding protein 1	protein-coding
unique_peak2-32804-9-6-0.382258484346616-1.11707584880836	chr1	183388918	183389348	+	0	NA	intron (NM_028408, intron 5 of 5)	intron (NM_028408, intron 5 of 5)	52449	NM_207280	403180	Mm.220754	NM_207280	ENSMUSG00000050625	Ccdc121	6530421E24Rik|Gm755	coiled-coil domain containing 121	protein-coding
unique_peak2-34427-5-6--0.511735258063458-0.947717972411649	chr14	20610180	20610601	+	0	NA	intron (NM_008695, intron 10 of 20)	intron (NM_008695, intron 10 of 20)	32655	NM_026528	68045	Mm.21932	NM_026528	ENSMUSG00000021807	2700060E02Rik	-	RIKEN cDNA 2700060E02 gene	protein-coding
unique_peak2-37731-11-21--0.950738034385684-0.991115276827166	chr5	109751186	109751929	+	0	NA	Intergenic	Lx3C|LINE|L1	-7843	NM_001104627	384220	Mm.469880	NM_001104627	ENSMUSG00000092080	Vmn2r16	EG384220	vomeronasal 2, receptor 16	protein-coding
common_peak1-18613-64-89--0.0264066946210715-0.302256822760962	chr8	107435877	107437190	+	0	NA	Intergenic	L1_Mus2|LINE|L1	-13627	NM_001163756	234673	Mm.441134	NM_172759	ENSMUSG00000031886	Ces2e	9030624L02Rik|Ces5	carboxylesterase 2E	protein-coding
common_peak1-9535-12-16--0.4386868561627-0.368541233333383	chr11	116087420	116088129	+	0	NA	intron (NM_025276, intron 18 of 21)	B1_Mus1|SINE|Alu	10458	NR_004853	69681	Mm.33677	NR_004853	ENSMUSG00000092300	Cdk3-ps	2310050O10Rik|Cdk3	cyclin-dependent kinase 3, pseudogene	pseudo
common_peak1-13145-64-49-0.821590211933879-2.7455047718137	chr19	10203123	10204602	+	0	NA	Intergenic	Intergenic	-27869	NM_019699	56473	Mm.38901	NM_019699	ENSMUSG00000024665	Fads2	2900042M13Rik|Fadsd2	fatty acid desaturase 2	protein-coding
unique_peak1-50-12-2-2.06381348436648-2.79529063155376	chr1	24107391	24107994	+	0	NA	promoter-TSS (NM_026604)	promoter-TSS (NM_026604)	-512	NM_026604	68187	Mm.87130	NM_026604	ENSMUSG00000026153	Fam135a	4921533L14Rik|AI256732|AI835491	family with sequence similarity 135, member A	protein-coding
common_peak2-26442-30-49--0.474180780282851-0.734468890407008	chr2	69897226	69898092	+	0	NA	intron (NM_177376, intron 2 of 34)	intron (NM_177376, intron 2 of 34)	20476	NM_177376	329421	Mm.99648	NM_177376	ENSMUSG00000042064	Myo3b	A430065P19Rik	myosin IIIB	protein-coding
common_peak1-13507-8-7-0.00522241794757061-1.00793137938329	chr2	91962892	91963420	+	0	NA	Intergenic	Intergenic	-61183	NM_138755	192285	Mm.330408	NM_138755	ENSMUSG00000058318	Phf21a	80kDa|Bhc|Bhc80|D030065N23Rik|PFTF1	PHD finger protein 21A	protein-coding
unique_peak2-38648-10-31--1.64358465499123-2.75133420124051	chr7	90456864	90457929	+	0	NA	Intergenic	Intergenic	-276045	NM_177695	233424	Mm.486619	NM_177695		Tmc3	9030203A06	transmembrane channel-like gene family 3	protein-coding
common_peak2-29787-21-38--0.715912953596013-0.993451450456403	chr6	89361368	89362551	+	0	NA	intron (NM_001167736, intron 5 of 6)	HAL1-3A_ME|LINE|L1	-49352	NM_008881	18844	Mm.3789	NM_008881	ENSMUSG00000030084	Plxna1	2600013D04Rik|NOV|PlexA1|Plxn1|mKIAA4053	plexin A1	protein-coding
common_peak2-30868-41-59--0.205741890759858-0.39695142494299	chr7	139388364	139389914	+	0	NA	Intergenic	MTC|LTR|MaLR	-42715	NM_018867	55987	Mm.471654	NM_018867	ENSMUSG00000030862	Cpxm2	4632435C11Rik|CPX-2|Cpx2	carboxypeptidase X 2 (M14 family)	protein-coding
common_peak1-9615-15-19--0.309763344331706-0.356936432242222	chr11	120823200	120823947	+	0	NA	3' UTR (NM_139059, exon 9 of 9)	3' UTR (NM_139059, exon 9 of 9)	13192	NM_001038654	80879	Mm.28632	NM_030696	ENSMUSG00000025161	Slc16a3	Mct3|Mct4	solute carrier family 16 (monocarboxylic acid transporters), member 3	protein-coding
unique_peak1-3634-11-2-1.92373108353046-2.32232533660526	chr19	37957183	37957709	+	0	NA	Intergenic	Intergenic	160621	NM_001099634	226101	Mm.34674	NM_177035	ENSMUSG00000048612	Myof	2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3	myoferlin	protein-coding
common_peak2-31480-8-5-0.420259917226415-1.10484139239135	chr8	106400041	106400477	+	0	NA	Intergenic	Intergenic	-225266	NM_009868	12562	Mm.21767	NM_009868	ENSMUSG00000031871	Cdh5	7B4|AA408225|Cd144|VE-Cad|VECD|VEcad|Vec	cadherin 5	protein-coding
common_peak2-19735-21-13-0.762134343208631-1.0220094258199	chr1	74084544	74085152	+	0	NA	intron (NM_001289895, intron 3 of 32)	MER2|DNA|MER2_type	86173	NM_027884	21961	Mm.309975	NM_027884	ENSMUSG00000055322	Tns1	1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns	tensin 1	protein-coding
common_peak2-31092-52-64-0.0858921772372447-0.34185676619046	chr8	25840205	25842128	+	0	NA	intron (NM_001272059, intron 18 of 18)	intron (NM_001272059, intron 18 of 18)	-4869	NM_009619	11497	Mm.5168	NM_009619	ENSMUSG00000031553	Adam3	Cyrn1|Taz83|tMDC	a disintegrin and metallopeptidase domain 3 (cyritestin)	protein-coding
common_peak2-31515-11-9-0.186765489364251-0.344532117358383	chr8	108713784	108714155	+	0	NA	intron (NM_178798, intron 3 of 9)	intron (NM_178798, intron 3 of 9)	20864	NM_001007567	66432	Mm.269029	NM_001007567	ENSMUSG00000033106	Slc7a6os	2010007L18Rik|2400002F02Rik	solute carrier family 7, member 6 opposite strand	protein-coding
common_peak1-18130-11-11--0.0762689164695427-0.301029995663976	chr8	10588884	10589587	+	0	NA	intron (NM_001081397, intron 33 of 35)	intron (NM_001081397, intron 33 of 35)	293219	NR_040705	320014	Mm.403203	NR_040705		B930025P03Rik	-	RIKEN cDNA B930025P03 gene	ncRNA
common_peak2-30472-14-23--0.685746340363512-0.669502273696327	chr7	47050501	47051372	+	0	NA	Intergenic	Intergenic	277800	NM_001004139	70227	Mm.333800	NM_001004139	ENSMUSG00000068959	Zfp619	3000002G13Rik	zinc finger protein 619	protein-coding
common_peak2-32240-21-32--0.474904854092218-0.550049347815239	chrX	11664652	11665497	+	0	NA	intron (NM_001168321, intron 1 of 13)	CpG	-7395	NM_029510	71458	Mm.196328	NM_029510	ENSMUSG00000040363	Bcor	5830466J11Rik|8430401K06Rik|BcorR|D930024N20Rik|mKIAA1575	BCL6 interacting corepressor	protein-coding
common_peak1-16007-33-55--0.476017359532075-0.817484656603571	chr5	34369610	34370618	+	0	NA	intron (NM_181857, intron 19 of 24)	MTE-int|LTR|MaLR	31481	NM_001001985	269642	Mm.274610	NM_001001985	ENSMUSG00000048142	Nat8l	1110038O08Rik|Shati	N-acetyltransferase 8-like	protein-coding
common_peak2-28820-48-77--0.314475067627434-0.605544847524802	chr5	65536730	65538125	+	0	NA	intron (NM_175174, intron 4 of 10)	intron (NM_175174, intron 4 of 10)	14957	NM_175174	71778	Mm.10281	NM_175174	ENSMUSG00000054920	Klhl5	1300013C10Rik	kelch-like 5	protein-coding
common_peak2-28059-5-6--0.511735258063458-0.947717972411649	chr4	59580329	59580681	+	0	NA	Intergenic	Intergenic	-13930	NM_001301367	72479	Mm.272905	NM_024255	ENSMUSG00000028383	Hsdl2	2610207I16Rik	hydroxysteroid dehydrogenase like 2	protein-coding
unique_peak2-32748-3-8--1.58390809140159-1.39487600375387	chr1	167375356	167375774	+	0	NA	intron (NM_028759, intron 1 of 18)	L1Md_T|LINE|L1	15029	NM_028759	74106	Mm.227605	NM_028759	ENSMUSG00000026571	Dcaf6	1200006M05Rik|Iqwd1|PC326	DDB1 and CUL4 associated factor 6	protein-coding
common_peak1-19131-36-36-0.269867720538804-0.51862626278861	chr9	78527027	78528373	+	0	NA	intron (NM_153098, intron 17 of 32)	intron (NM_153098, intron 17 of 32)	64347	NM_153098	235505	Mm.32955	NM_153098	ENSMUSG00000046186	Cd109	9930012E15Rik|AI480638|GARP	CD109 antigen	protein-coding
common_peak1-7484-74-111--0.0914683450789964-0.337225858145287	chr1	6213945	6215638	+	0	NA	intron (NM_009826, intron 1 of 23)	B2_Mm1t|SINE|B2	10048	NM_009826	12421	Mm.293811	NM_009826	ENSMUSG00000025907	Rb1cc1	2900055E04Rik|5930404L04Rik|Cc1|FIP200|LaXp180	RB1-inducible coiled-coil 1	protein-coding
common_peak2-22437-13-8-0.608547029195456-0.660903317613904	chr13	38736477	38737006	+	0	NA	TTS (NM_025380)	TTS (NM_025380)	-9763	NM_139063	17828	Mm.261554	NM_139063	ENSMUSG00000038982	Bloc1s5	1810074A19Rik|Muted|mu	biogenesis of lysosomal organelles complex-1, subunit 5, muted	protein-coding
common_peak2-31200-20-53--1.26681271757228-3.16860498301544	chr8	61223634	61224869	+	0	NA	intron (NM_175032, intron 1 of 11)	intron (NM_175032, intron 1 of 11)	-44658	NM_001177534	100271928	Mm.484123	NM_001177534		Gm15881	OTTMUSG00000027193	predicted gene 15881	protein-coding
common_peak1-18302-9-11--0.395349094316936-0.344532117358383	chr8	46151974	46152491	+	0	NA	Intergenic	Lx7|LINE|L1	-1460	NR_033588	434310	Mm.334512	NR_033588	ENSMUSG00000066158	AY512931	-	cDNA sequence AY512931	ncRNA
common_peak1-14369-12-6-0.841421063030034-1.58711810488664	chr2	167632099	167632840	+	0	NA	Intergenic	Intergenic	115792	NR_015500	329562	Mm.123101	NM_177851	ENSMUSG00000006462	A530013C23Rik	-	RIKEN cDNA A530013C23 gene	ncRNA
common_peak2-20681-7-11--0.785871670422967-1.21681515183528	chr10	88357003	88357377	+	0	NA	intron (NM_145423, intron 3 of 14)	intron (NM_145423, intron 3 of 14)	8453	NM_145423	216225	Mm.77381	NM_145423	ENSMUSG00000020062	Slc5a8	Ait|SMCT	solute carrier family 5 (iodide transporter), member 8	protein-coding
common_peak1-8362-17-40--1.13925566641305-1.9602491241746	chr10	59616162	59616687	+	0	NA	Intergenic	Intergenic	26900	NR_105871	102465546		NR_105871		Mir6906	mmu-mir-6906	microRNA mir-6906	ncRNA
common_peak1-7832-22-12-0.946844386946312-1.31435121412491	chr1	127975728	127976598	+	0	NA	intron (NM_172484, intron 8 of 14)	intron (NM_172484, intron 8 of 14)	-167372	NM_145100	72585	Mm.490405	NM_145100		Lypd1	2700050C12Rik|AI853408|C530008O16Rik|Lynx2|Lypdc1	Ly6/Plaur domain containing 1	protein-coding
common_peak1-12305-11-28--1.34928741087596-1.9654245668484	chr17	46867178	46867806	+	0	NA	Intergenic	Intergenic	-1378	NM_010321	14711	Mm.29395	NM_010321	ENSMUSG00000002769	Gnmt	-	glycine N-methyltransferase	protein-coding
unique_peak1-2633-25-3-2.86184990534511-5.6100962539031	chr16	43548773	43549938	+	0	NA	intron (NM_001285805, intron 5 of 10)	intron (NM_001285805, intron 5 of 10)	-91413	NR_030576	100124467		NR_030576	miRBase:MI0005517	Mir568	Mirn568|mmu-mir-568	microRNA 568	ncRNA
unique_peak2-37024-4-10--1.48289213249054-1.5150158574804	chr3	126763927	126764520	+	0	NA	Intergenic	Intergenic	-62853	NM_178655	109676	Mm.220242	NM_178655	ENSMUSG00000032826	Ank2	AI835472|AW491075|Ank-2	ankyrin 2, brain	protein-coding
unique_peak2-33841-1-12--3.32749672835784-3.1004765869889	chr12	15816277	15816753	+	0	NA	exon (NM_144551, exon 2 of 3)	exon (NM_144551, exon 2 of 3)	7076	NM_144551	217410	Mm.491136	NM_144551	ENSMUSG00000020601	Trib2	AW319517|TRB-2|TRB2	tribbles homolog 2 (Drosophila)	protein-coding
unique_peak1-603-7-3-0.799090830298189-1.23214870625617	chr10	20090011	20090532	+	0	NA	Intergenic	Intergenic	22646	NM_027930	71804	Mm.262151	NM_027930	ENSMUSG00000019992	Mtfr2	2610016C23Rik|4933412C16Rik|Dufd1|Fam54a	mitochondrial fission regulator 2	protein-coding
common_peak2-20150-24-32--0.251184216590737-0.358978896303361	chr1	168597354	168598113	+	0	NA	intron (NM_172844, intron 7 of 9)	intron (NM_172844, intron 7 of 9)	14243	NM_172844	240894	Mm.246610	NM_172844	ENSMUSG00000026560	Fmo9	4831428F09Rik	flavin containing monooxygenase 9	protein-coding
unique_peak1-1108-10-3-1.35641534500877-1.75805390616669	chr11	90286705	90287220	+	0	NA	Intergenic	Intergenic	-34731	NM_172563	217082	Mm.158903	NM_172563	ENSMUSG00000003949	Hlf	E230015K02Rik	hepatic leukemia factor	protein-coding
common_peak1-10741-16-18--0.129663871175524-0.307235046933848	chr14	66257386	66258114	+	0	NA	intron (NM_001195674, intron 14 of 18)	intron (NM_001195674, intron 14 of 18)	-27490	NM_028903	71145	Mm.83840	NM_028903	ENSMUSG00000022032	Scara5	4932433F15Rik|4933425F03Rik|AV278087|Tesr	scavenger receptor class A, member 5 (putative)	protein-coding
common_peak1-16474-27-46--0.563042900782402-0.849650211186454	chr5	137306913	137307963	+	0	NA	intron (NM_024474, intron 3 of 12)	RMER19C|LTR|ERVK	51539	NM_024474	140709	Mm.295020	NM_024474	ENSMUSG00000004415	Col26a1	9430032K24Rik|BC002218|Col26a|Emid2|Emu2	collagen, type XXVI, alpha 1	protein-coding
common_peak2-22183-44-42-0.395628079866437-0.796452271284518	chr12	104751154	104752112	+	0	NA	Intergenic	L2b|LINE|L2	-19142	NM_028980	74521	Mm.248619	NM_028980	ENSMUSG00000021209	Ppp4r4	8430415E04Rik|mKIAA1622	protein phosphatase 4, regulatory subunit 4	protein-coding
common_peak2-24638-31-46--0.329350180864514-0.513362016391488	chr17	35000815	35002022	+	0	NA	intron (NM_013484, intron 11 of 17)	intron (NM_013484, intron 11 of 17)	-1959	NM_008198	14962	Mm.653	NM_008198	ENSMUSG00000090231	Cfb	AI195813|AI255840|B|Bf|C2|Fb|H2-Bf	complement factor B	protein-coding
common_peak2-25244-19-34--0.72659569028328-0.974620203848502	chr18	64887328	64888460	+	0	NA	Intergenic	RLTR25B|LTR|ERVK	-67240	NM_001001488	54670	Mm.270043	NM_001001488	ENSMUSG00000039529	Atp8b1	AI451886|FIC1|Ic	ATPase, class I, type 8B, member 1	protein-coding
common_peak1-12591-22-24-0.00342791531268016-0.305461879681376	chr18	23988926	23989928	+	0	NA	intron (NM_153058, intron 1 of 6)	L1Md_F3|LINE|L1	26956	NM_153058	212307	Mm.132237	NM_153058	ENSMUSG00000024277	Mapre2	AI314113|C820009F03Rik|D18Abb1e|EB1|EB2|RP1	microtubule-associated protein, RP/EB family, member 2	protein-coding
unique_peak1-5906-7-3-0.799090830298189-1.23214870625617	chr6	87885547	87886058	+	0	NA	intron (NM_173737, intron 6 of 6)	intron (NM_173737, intron 6 of 6)	21832	NM_173737	232210	Mm.246241	NM_173737	ENSMUSG00000030060	Hmces	8430410A17Rik|C85376	5-hydroxymethylcytosine (hmC) binding, ES cell specific	protein-coding
unique_peak2-38794-5-13--1.51173525806346-1.78669045979184	chr7	130671428	130671853	+	0	NA	Intergenic	RSINE1|SINE|B4	-27677	NM_001081329	210162	Mm.135397	NM_175435	ENSMUSG00000030757	Zkscan2	9430065N20Rik|AW493225|Zfp694	zinc finger with KRAB and SCAN domains 2	protein-coding
unique_peak2-36973-10-17--0.813509656433543-0.699649909729472	chr3	116006728	116007423	+	0	NA	intron (NM_001173553, intron 9 of 13)	intron (NM_001173553, intron 9 of 13)	-50673	NM_022427	64378	Mm.40025	NM_022427	ENSMUSG00000068696	Gpr88	AW061286|Strg	G-protein coupled receptor 88	protein-coding
unique_peak2-32659-4-5--0.608423014574403-0.909929411522249	chr1	133959570	133959907	+	0	NA	intron (NM_001114662, intron 1 of 9)	intron (NM_001114662, intron 1 of 9)	4901	NM_172510	213006	Mm.208445	NM_172510	ENSMUSG00000059149	Mfsd4	A230072B04|A930031D07Rik|AI850289	major facilitator superfamily domain containing 4	protein-coding
unique_peak2-37883-4-7--1.02346051385325-1.09384600808989	chr5	139380426	139380858	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	84608	NM_001195128	384244	Mm.485002	NM_001195128	ENSMUSG00000094504	Gm5294	EG384244	predicted gene 5294	protein-coding
common_peak1-11013-7-11--0.785871670422967-1.21681515183528	chr15	37317852	37318170	+	0	NA	intron (NM_001170866, intron 5 of 6)	intron (NM_001170866, intron 5 of 6)	-37298	NM_029113	74892	Mm.107630	NM_029113	ENSMUSG00000022288	4930447A16Rik	-	RIKEN cDNA 4930447A16 gene	protein-coding
common_peak1-12005-13-14--0.12841856497075-0.301029995663977	chr17	13759626	13760237	+	0	NA	Intergenic	Intergenic	-12971	NR_045437	72578	Mm.46549	NR_045436	ENSMUSG00000038347	2700054A10Rik	-	RIKEN cDNA 2700054A10 gene	ncRNA
common_peak2-27585-9-13--0.617741515653384-0.459837087125828	chr3	101379958	101380621	+	0	NA	3' UTR (NM_144900, exon 23 of 23)	3' UTR (NM_144900, exon 23 of 23)	28341	NM_144900	11928	Mm.280103	NM_144900	ENSMUSG00000033161	Atp1a1	Atpa-1|BC010319	ATPase, Na+/K+ transporting, alpha 1 polypeptide	protein-coding
common_peak2-31752-39-55--0.19159367513845-0.376238101225462	chr9	20606911	20608016	+	0	NA	exon (NM_016919, exon 10 of 67)	exon (NM_016919, exon 10 of 67)	12015	NM_016919	53867	Mm.334994	NM_016919	ENSMUSG00000004098	Col5a3	-	collagen, type V, alpha 3	protein-coding
unique_peak1-196-11-1-2.50869358425161-2.83420869758413	chr1	78725490	78726092	+	0	NA	Intergenic	MT2A|LTR|ERVL	70776	NM_001136226	195434	Mm.276016	NM_001001981	ENSMUSG00000079470	Utp14b	4932411L21Rik|jsd	UTP14, U3 small nucleolar ribonucleoprotein, homolog B (yeast)	protein-coding
unique_peak2-38940-5-8--0.874305337448166-1.10484139239135	chr8	25465972	25466503	+	0	NA	Intergenic	RLTR17|LTR|ERVK	83181	NM_026931	69068	Mm.25775	NM_026931	ENSMUSG00000056313	1810011O10Rik	1110065B09Rik|AW121743|AW321058	RIKEN cDNA 1810011O10 gene	protein-coding
unique_peak2-38797-5-8--0.874305337448166-1.10484139239135	chr7	130936238	130936662	+	0	NA	Intergenic	Intergenic	-190245	NM_001252072	628779	Mm.40210	NM_001252072	ENSMUSG00000078591	Hs3st4	EG628779|Gm6915	heparan sulfate (glucosamine) 3-O-sulfotransferase 4	protein-coding
common_peak1-8827-14-29--1.00767443525087-1.28534286439185	chr11	23254824	23255499	+	0	NA	intron (NM_001190401, intron 10 of 79)	intron (NM_001190401, intron 10 of 79)	48266	NM_001190401	17847	Mm.119155	NM_001190401	ENSMUSG00000056342	Usp34	A530081C03Rik|Murr2	ubiquitin specific peptidase 34	protein-coding
unique_peak1-1255-8-0-3.00522241794757-2.70926996097583	chr11	116144064	116144534	+	0	NA	exon (NM_010254, exon 2 of 2)	exon (NM_010254, exon 2 of 2)	2046	NM_010254	14428	Mm.57149	NM_010254	ENSMUSG00000020793	Galr2	mGalR	galanin receptor 2	protein-coding
common_peak2-27877-9-4-0.867685311516858-1.36011389749466	chr4	35225215	35225644	+	0	NA	Intergenic	L1_Mm|LINE|L1	-52300	NM_001081343	73205	Mm.331544	NM_001081343	ENSMUSG00000028300	3110043O21Rik	AI840585	RIKEN cDNA 3110043O21 gene	protein-coding
common_peak1-15399-19-19-0.0807592317743238-0.322753776620787	chr4	82507995	82508819	+	0	NA	Intergenic	Intergenic	-2842	NM_026647	68268	Mm.32047	NM_026647	ENSMUSG00000028403	Zdhhc21	9130404H11Rik|AL024349|D130004H04Rik|dep	zinc finger, DHHC domain containing 21	protein-coding
common_peak1-12708-97-109-0.402641357967622-1.41273347245023	chr18	46596743	46598906	+	0	NA	Intergenic	Intergenic	27646	NR_045438	72076	Mm.82766	NM_028086	ENSMUSG00000046487	Mospd4	2010013H21Rik	motile sperm domain containing 4	pseudo
common_peak2-20569-15-9-0.690236655668294-0.732381977911291	chr10	76121815	76122311	+	0	NA	Intergenic	Lx7|LINE|L1	-35914	NM_146007	12834	Mm.1949	NM_146007	ENSMUSG00000020241	Col6a2	Col6a-2	collagen, type VI, alpha 2	protein-coding
common_peak2-31589-21-34--0.559793751678731-0.677299098039755	chr8	121107612	121108348	+	0	NA	intron (NM_019707, intron 2 of 13)	ORR1E|LTR|MaLR	300325	NM_019707	12554	Mm.334841	NM_019707	ENSMUSG00000031841	Cdh13	4932416G01Rik|Cdht|T-cadherin|Tcad	cadherin 13	protein-coding
common_peak2-27430-41-113--1.13174130931608-5.31616646756238	chr3	89418484	89420557	+	0	NA	intron (NM_080466, intron 3 of 7)	intron (NM_080466, intron 3 of 7)	95434	NM_080466	140493	Mm.120250	NM_080466		Kcnn3	KCa2.3|SK3|SKCA3	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	protein-coding
unique_peak2-33608-4-12--1.72390023199434-1.85743853830261	chr11	94521169	94521540	+	0	NA	TTS (NM_053161)	TTS (NM_053161)	6249	NM_053161	94064	Mm.34951	NM_053161	ENSMUSG00000024414	Mrpl27	A630055F16Rik|D11Moh47|D18Ertd643e	mitochondrial ribosomal protein L27	protein-coding
unique_peak2-37014-8-9--0.316705676939792-1.03275496310833	chr3	123054556	123055113	+	0	NA	intron (NM_027135, intron 15 of 22)	intron (NM_027135, intron 15 of 22)	34074	NM_201638	210529	Mm.260039	NM_201638	ENSMUSG00000028114	Mettl14	G430022H21Rik|mKIAA1627	methyltransferase like 14	protein-coding
common_peak1-15902-40-51--0.0414640353899935-0.301029995663982	chr5	20950615	20952053	+	0	NA	intron (NM_177869, intron 4 of 7)	intron (NM_177869, intron 4 of 7)	20613	NM_177869	330050	Mm.40655	NM_177869	ENSMUSG00000047221	Fam185a	4631428I10|AI847670	family with sequence similarity 185, member A	protein-coding
unique_peak1-6416-9-10--0.269818212233077-1.05503135781948	chr7	84605447	84605950	+	0	NA	Intergenic	L1Md_F2|LINE|L1	1117026	NM_008746	18213	Mm.33496	NM_008746		Ntrk3	AW125844|Ntrk3_tv3|TrkC	neurotrophic tyrosine kinase, receptor, type 3	protein-coding
common_peak1-13125-16-5-1.53330114154691-1.80287260729378	chr19	8992968	8993561	+	0	NA	Intergenic	(TTTC)n|Simple_repeat|Simple_repeat	-1619	NM_024256	72727	Mm.259	NM_024256	ENSMUSG00000071649	B3gat3	2810405M13Rik	beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I)	protein-coding
common_peak2-29368-17-24--0.425559851569687-0.427564438475253	chr5	151368693	151369425	+	0	NA	intron (NM_001081001, intron 24 of 26)	intron (NM_001081001, intron 24 of 26)	28041	NM_133898	100637	Mm.279932	NM_133898	ENSMUSG00000041132	N4bp2l1	2410024N18Rik|AI428195|B230342M21Rik	NEDD4 binding protein 2-like 1	protein-coding
common_peak2-23451-53-67-0.0535101711655894-0.326210013932454	chr15	65786978	65787919	+	0	NA	intron (NM_001145096, intron 6 of 16)	L1_Rod|LINE|L1	20918	NM_001145096	654498	Mm.364550	NM_001145096	ENSMUSG00000072511	Hhla1	F930104E18Rik	HERV-H LTR-associating 1	protein-coding
unique_peak2-34687-5-7--0.704380336005853-1.01466476204226	chr15	25269362	25269642	+	0	NA	Intergenic	Intergenic	74017	NM_027395	70350	Mm.29586	NM_027395	ENSMUSG00000045763	Basp1	2610024P12Rik|CAP-23|CAP23|Ckap3|NAP-22|NAP22	brain abundant, membrane attached signal protein 1	protein-coding
common_peak2-31816-19-40--0.954864677956397-1.60774463804084	chr9	41474852	41475953	+	0	NA	Intergenic	Intergenic	85393	NR_029822	387236		NR_029822	miRBase:MI0000725	Mir125b-1	Mirn125b|Mirn125b-1	microRNA 125b-1	ncRNA
unique_peak2-39685-4-6--0.830815435910851-0.989110657569874	chr9	109058860	109059271	+	0	NA	intron (NM_177069, intron 3 of 9)	intron (NM_177069, intron 3 of 9)	5471	NM_177069	320082	Mm.188028	NM_177069	ENSMUSG00000047237	Fbxw21	E330009P21Rik	F-box and WD-40 domain protein 21	protein-coding
common_peak2-23948-18-13-0.505564229170747-0.625923329873571	chr16	14159442	14160187	+	0	NA	promoter-TSS (NM_001081154)	promoter-TSS (NM_001081154)	95	NR_030252	723916		NR_030252	miRBase:MI0003491	Mir484	Mirn484|mmu-mir-484	microRNA 484	ncRNA
common_peak1-15351-16-22--0.405298313788951-0.440610794044987	chr4	56801953	56802780	+	0	NA	intron (NM_026079, intron 10 of 36)	intron (NM_026079, intron 10 of 36)	-12835	NM_001081420	230234	Mm.268148	NM_001081420	ENSMUSG00000038827	Fam206a	-	family with sequence similarity 206, member A	protein-coding
unique_peak2-38029-2-13--2.72480917832092-2.79529063155376	chr6	37732467	37732917	+	0	NA	Intergenic	RLTR1D|LTR|ERV1	-88119	NM_001272064	21848	Mm.41063	NM_145076		Trim24	A130082H20Rik|AI447469|D430004I05Rik|TIF1|TIF1-alpha|TIF1alpha|Tif1a	tripartite motif-containing 24	protein-coding
unique_peak1-2964-7-0-2.79909083029819-2.40823996531185	chr17	72638110	72638585	+	0	NA	intron (NM_007439, intron 3 of 28)	PB1D10|SINE|Alu	315300	NM_007439	11682	Mm.311854	NM_007439	ENSMUSG00000055471	Alk	CD246|Tcrz	anaplastic lymphoma kinase	protein-coding
common_peak2-20303-9-8-0.0196884049619079-1.03275496310833	chr1	195016885	195017416	+	0	NA	intron (NM_153137, intron 8 of 15)	PB1D10|SINE|Alu	10590	NM_153137	215243	Mm.261259	NM_153137	ENSMUSG00000037318	Traf3ip3	6030423D04Rik|AI115021|T3jam	TRAF3 interacting protein 3	protein-coding
common_peak2-21669-16-9-0.796335547380699-0.844317084070804	chr11	103142497	103143011	+	0	NA	Intergenic	Intergenic	-14039	NM_016896	53859	Mm.158981	NM_016896	ENSMUSG00000020941	Map3k14	Nik|aly	mitogen-activated protein kinase kinase kinase 14	protein-coding
unique_peak2-35297-8-9--0.316705676939792-1.03275496310833	chr17	10719799	10720342	+	0	NA	intron (NM_027032, intron 4 of 4)	intron (NM_027032, intron 4 of 4)	70988	NR_077238	319750	Mm.383485	NR_077237	ENSMUSG00000089633	A230009B12Rik	-	RIKEN cDNA A230009B12 gene	ncRNA
common_peak2-28228-4-4--0.345388608740609-0.864171920961574	chr4	119127577	119128006	+	0	NA	Intergenic	ID_B1|SINE|B4	32502	NM_001014900	332934	Mm.388911	NM_001014900	ENSMUSG00000070806	Zmynd12	AI414736	zinc finger, MYND domain containing 12	protein-coding
common_peak2-29853-41-26-0.946261202685192-2.21947156384787	chr6	99172875	99173586	+	0	NA	intron (NM_053202, intron 3 of 18)	intron (NM_053202, intron 3 of 18)	43279	NM_001197321	108655	Mm.234965	NM_053202	ENSMUSG00000030067	Foxp1	3110052D19Rik|4932443N09Rik|AI461938|AW494214	forkhead box P1	protein-coding
common_peak1-11194-25-35--0.308075096097206-0.423354874519378	chr15	77819962	77820867	+	0	NA	Intergenic	Intergenic	-19160	NM_018749	55944	Mm.3955	NM_018749	ENSMUSG00000016554	Eif3d	66/67kDa|AA407891|Eif3s7|eIF3p66	eukaryotic translation initiation factor 3, subunit D	protein-coding
common_peak1-10723-18-21--0.146512467408946-0.306326795069975	chr14	62991614	62992555	+	0	NA	TTS (NM_026001)	TTS (NM_026001)	41142	NM_026001	67153	Mm.26040	NM_026001	ENSMUSG00000021932	Rnaseh2b	1110019N06Rik|2610207P08Rik|Dleu8	ribonuclease H2, subunit B	protein-coding
common_peak1-10633-12-19--0.673152109799724-0.546772548767014	chr14	45329867	45330446	+	0	NA	Intergenic	BGLII|LTR|ERVK	14506	NM_001162954	666744	Mm.387002	NM_001162954	ENSMUSG00000091923	Gm8267	EG666744	predicted gene 8267	protein-coding
unique_peak1-5949-9-4-0.867685311516858-1.36011389749466	chr6	91218150	91218658	+	0	NA	intron (NM_001081437, intron 13 of 16)	RLTRETN_Mm|LTR|ERVK	55646	NM_007992	14115	Mm.249146	NM_007992	ENSMUSG00000064080	Fbln2	5730577E14Rik|FIBL-2	fibulin 2	protein-coding
unique_peak1-6331-9-0-3.18961340640422-3.01029995663981	chr7	47037631	47038131	+	0	NA	Intergenic	IAPLTR1a_Mm|LTR|ERVK	264745	NM_001004139	70227	Mm.333800	NM_001004139	ENSMUSG00000068959	Zfp619	3000002G13Rik	zinc finger protein 619	protein-coding
common_peak2-24980-8-13--0.802132504110034-0.562038191119711	chr18	8651201	8651728	+	0	NA	Intergenic	RMER17B|LTR|ERVK	-561390	NM_008058	14370	Mm.184289	NM_008058	ENSMUSG00000036904	Fzd8	Fz8	frizzled homolog 8 (Drosophila)	protein-coding
unique_peak1-6082-10-0-3.35641534500877-3.31132995230379	chr6	121177472	121178192	+	0	NA	Intergenic	Intergenic	17044	NM_017379	53857	Mm.32884	NM_017379		Tuba8	-	tubulin, alpha 8	protein-coding
unique_peak2-39134-13-20--0.613845392140992-0.532159081577619	chr8	84902607	84903578	+	0	NA	intron (NM_008357, intron 2 of 7)	intron (NM_008357, intron 2 of 7)	23393	NM_001254747	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
unique_peak2-32565-2-9--2.23938235115068-1.87199725847353	chr1	79759823	79760429	+	0	NA	Intergenic	Intergenic	-1782	NM_027057	69368	Mm.293273	NM_027057	ENSMUSG00000073643	Wdfy1	1700013B03Rik|1700120F24Rik|FENS-1|Jr1|WDF1|ZFYVE17|mKIAA1435	WD repeat and FYVE domain containing 1	protein-coding
unique_peak1-2415-8-1-2.00522241794757-2.05605744720049	chr15	99650285	99650824	+	0	NA	promoter-TSS (NM_023063)	promoter-TSS (NM_023063)	26	NM_023063	65970	Mm.33207	NM_023063	ENSMUSG00000023022	Lima1	Eplin	LIM domain and actin binding 1	protein-coding
common_peak2-31124-16-8-0.948338640825749-1.02063122982878	chr8	33906824	33907302	+	0	NA	Intergenic	B2_Mm1a|SINE|B2	153435	NM_001177589	100042715	Mm.291093	NM_001177589		Gm3985	-	predicted gene 3985	protein-coding
common_peak2-28965-64-85-0.0391816470065054-0.312327239180854	chr5	103752924	103754521	+	0	NA	Intergenic	Intergenic	-25674	NR_040699	74624	Mm.389662	NR_040699		4930429D17Rik	-	RIKEN cDNA 4930429D17 gene	ncRNA
unique_peak1-4462-47-14-2.02795082915803-7.1995973512372	chr2	180114142	180116551	+	0	NA	intron (NR_040745, intron 5 of 6)	(TCCA)n|Simple_repeat|Simple_repeat	-4963	NR_045331	622283	Mm.447602	NR_045331		Gm6307	EG622283	predicted gene 6307	ncRNA
unique_peak2-35375-6-25--2.13504160776079-3.01815507148775	chr17	28485276	28486013	+	0	NA	intron (NM_011566, intron 1 of 12)	intron (NM_011566, intron 1 of 12)	1647	NM_001204156	21678	Mm.6655	NM_011566	ENSMUSG00000002249	Tead3	DTEF-1|ETFR-1|TEAD-3|TEF-5|Tcf13r2	TEA domain family member 3	protein-coding
common_peak2-23576-81-181--0.635745037190131-3.30908988442965	chr15	79741051	79742902	+	0	NA	Intergenic	Intergenic	-18408	NR_030675	109361	Mm.394656	NR_030675		D730005E14Rik	-	RIKEN cDNA D730005E14 gene	ncRNA
common_peak2-32425-36-38-0.193918867305506-0.429377759889511	chrX	166440081	166441278	+	0	NA	Intergenic	Intergenic	-23830	NR_029457	654820	Mm.34441	NM_001039559	ENSMUSG00000072844	G530011O06Rik	-	RIKEN cDNA G530011O06 gene	ncRNA
common_peak2-24710-17-33--0.869166503045301-1.12969433525548	chr17	46273929	46274837	+	0	NA	intron (NM_029338, intron 2 of 4)	(CCTA)n|Simple_repeat|Simple_repeat	6764	NM_029338	75564	Mm.17993	NM_029338	ENSMUSG00000023966	Rsph9	1700027N10Rik	radial spoke head 9 homolog (Chlamydomonas)	protein-coding
common_peak2-29125-11-22--1.0148683718054-1.11267835143409	chr5	124115810	124116464	+	0	NA	intron (NM_019765, intron 1 of 23)	B1_Mur4|SINE|Alu	18233	NM_001291229	56430	Mm.241109	NM_019765	ENSMUSG00000049550	Clip1	1110007I12Rik|4631429H07Rik|AV017631|C81039|CLIP-170|CLIP170|CYLN1|Clip50|Rsn|mKIAA4046|restin	CAP-GLY domain containing linker protein 1	protein-coding
common_peak1-14362-14-22--0.624345795699369-0.590343908676233	chr2	167402864	167403432	+	0	NA	Intergenic	Intergenic	39421	NM_011427	20613	Mm.2093	NM_011427	ENSMUSG00000042821	Snai1	AI194338|Sna|Sna1|Snail|Snail1	snail family zinc finger 1	protein-coding
common_peak1-10874-42-50-0.0699039858956887-0.334445504886124	chr15	58932693	58934267	+	0	NA	Intergenic	RLTR14|LTR|ERV1	-19899	NM_144800	211401	Mm.215481	NM_144800	ENSMUSG00000022353	Mtss1	2310003N14Rik|BC024131|D130001D01Rik|Mim|mKIAA0429	metastasis suppressor 1	protein-coding
common_peak1-13450-18-7-1.31291915122835-1.71830443967823	chr19	57180964	57181774	+	0	NA	intron (NM_001290813, intron 6 of 20)	intron (NM_001290813, intron 6 of 20)	12145	NM_001103178	226251	Mm.217161	NM_178688	ENSMUSG00000025085	Ablim1	2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059	actin-binding LIM protein 1	protein-coding
common_peak2-26908-93-163--0.246482141111815-0.752436957991269	chr2	160645965	160647137	+	0	NA	intron (NM_177263, intron 2 of 3)	L1Md_T|LINE|L1	52175	NM_177263	320799	Mm.436734	NM_177263	ENSMUSG00000035877	Zhx3	1810059C13Rik|4932418O04Rik|9530010N21Rik|Tix1|mKIAA0395	zinc fingers and homeoboxes 3	protein-coding
common_peak2-32298-19-21--0.0567442919756109-0.301029995663971	chrX	38589870	38590866	+	0	NA	Intergenic	L1Md_T|LINE|L1	-164110	NM_016886	53623	Mm.327681	NM_016886	ENSMUSG00000001986	Gria3	2900064I19Rik|GluA3|GluR-C|GluR-K3|Glur-3|Glur3|Gluralpha3	glutamate receptor, ionotropic, AMPA3 (alpha 3)	protein-coding
unique_peak1-3408-8-5-0.420259917226415-1.10484139239135	chr19	5704398	5704907	+	0	NA	exon (NM_010609, exon 1 of 3)	exon (NM_010609, exon 1 of 3)	176	NM_010609	16530	Mm.440033	NM_010609	ENSMUSG00000024936	Kcnk7	2310014G03Rik|Kcnk6|Kcnk8|Knot|Mlk3	potassium channel, subfamily K, member 7	protein-coding
common_peak1-16416-148-151-0.669326614198535-4.91838360259883	chr5	129500496	129502271	+	0	NA	intron (NM_007941, intron 3 of 10)	intron (NM_007941, intron 3 of 10)	13064	NM_001286033	13852	Mm.260716	NM_007941	ENSMUSG00000029428	Stx2	AW538950|Epim|G1-536-1|Syn-2|repro34	syntaxin 2	protein-coding
unique_peak1-6435-13-4-1.45654393575041-2.23384849113406	chr7	98161331	98161886	+	0	NA	Intergenic	Lx5|LINE|L1	-77688	NM_011807	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
common_peak1-15515-36-39-0.157392991280392-0.394172396164276	chr4	117119612	117120693	+	0	NA	intron (NM_025739, intron 2 of 14)	intron (NM_025739, intron 2 of 14)	49368	NM_025739	66743	Mm.318331	NM_025739	ENSMUSG00000028677	Rnf220	4732477A13|4931406I20Rik|5730503K05Rik|AV302541	ring finger protein 220	protein-coding
unique_peak1-4136-9-2-1.60465090568306-1.87199725847353	chr2	92464601	92465083	+	0	NA	Intergenic	MTE2a|LTR|MaLR	24978	NM_023850	76969	Mm.38021	NM_023850	ENSMUSG00000027221	Chst1	2610008E20Rik|AW125896|C6ST|GST-1|Gst1|KSGAL6ST	carbohydrate (keratan sulfate Gal-6) sulfotransferase 1	protein-coding
common_peak2-21523-33-30-0.377141252138654-0.612304185853042	chr11	94629593	94630388	+	0	NA	Intergenic	B4A|SINE|B4	-7494	NM_001105561	217122	Mm.24063	NM_183153		Gm11545	A430060F13Rik|C86086|OTTMUSG00000002043	predicted gene 11545	protein-coding
common_peak1-15084-27-41--0.400771471883525-0.542588322087496	chr3	127836889	127838241	+	0	NA	intron (NR_045704, intron 3 of 5)	intron (NR_045704, intron 3 of 5)	96958	NR_045704	402774	Mm.209170	NR_045704		D030025E07Rik	-	RIKEN cDNA D030025E07 gene	ncRNA
unique_peak1-536-15-2-2.4272022498345-3.53487848679804	chr1	189213773	189214444	+	0	NA	Intergenic	Intergenic	174718	NM_026367	67769	Mm.138321	NM_026367	ENSMUSG00000039210	Gpatch2	5830433G22Rik|5830436K05Rik|AI427714|AI447508|AW107440|AW491060|Gpatc2	G patch domain containing 2	protein-coding
common_peak1-17544-22-26--0.107603397076064-0.30528805757448	chr7	29391926	29392808	+	0	NA	TTS (NM_175319)	TTS (NM_175319)	-9164	NM_027470	70584	Mm.21876	NM_027470	ENSMUSG00000030602	Pak4	5730488L07Rik|AW555722|mKIAA1142	p21 protein (Cdc42/Rac)-activated kinase 4	protein-coding
unique_peak2-35372-2-8--2.08737925770563-1.65811743852845	chr17	28290561	28290970	+	0	NA	intron (NM_001004366, intron 3 of 21)	intron (NM_001004366, intron 3 of 21)	11294	NM_001004366	268935	Mm.258491	NM_001004366	ENSMUSG00000038677	Scube3	CEGF3|D030038I21Rik	signal peptide, CUB domain, EGF-like 3	protein-coding
common_peak1-8740-12-13--0.158578936969966-0.301029995663979	chr11	3913269	3913940	+	0	NA	Intergenic	(CAT)n|Simple_repeat|Simple_repeat	-18181	NM_146013	103655	Mm.337476	NM_146013	ENSMUSG00000019368	Sec14l4	AI256582|AW536553|SPF|TAP	SEC14-like 4 (S. cerevisiae)	protein-coding
common_peak2-28216-30-38--0.115726809370376-0.312769113767451	chr4	118290381	118291461	+	0	NA	intron (NM_026789, intron 1 of 21)	L1MEc|LINE|L1	2089	NM_026789	68625	Mm.256495	NM_026789	ENSMUSG00000028730	Wdr65	1110020C03Rik|AV009650|C130004B06Rik|Gm1363	WD repeat domain 65	protein-coding
common_peak2-28256-9-7-0.18961340640422-1.05908390183068	chr4	126111158	126111512	+	0	NA	TTS (NM_153403)	TTS (NM_153403)	-4549	NM_153402	214150	Mm.440915	NM_153402		Ago3	AW048688|C130014L07Rik|Eif2c3	argonaute RISC catalytic subunit 3	protein-coding
common_peak1-9769-64-56-0.632556387543862-1.85815517112339	chr12	55301893	55303700	+	0	NA	intron (NM_028133, intron 1 of 4)	intron (NM_028133, intron 1 of 4)	2065	NM_028133	112407	Mm.133037	NM_028133	ENSMUSG00000035105	Egln3	2610021G09Rik|AI505553|AI648162|Hif-p4h-3|Phd3|SM-20	egl-9 family hypoxia-inducible factor 3	protein-coding
common_peak1-7507-8-8--0.164702583494742-1.00793137938329	chr1	16241534	16241979	+	0	NA	intron (NM_001111272, intron 11 of 12)	B1F|SINE|Alu	145793	NM_133832	98711	Mm.274376	NM_133832		Rdh10	3110069K09Rik|4921506A21Rik|AI875664|AW549993|D1Ertd762e|m366Asp	retinol dehydrogenase 10 (all-trans)	protein-coding
common_peak2-31791-9-8-0.0196884049619079-1.03275496310833	chr9	34280335	34280763	+	0	NA	Intergenic	Intergenic	-15767	NM_026324	67703	Mm.220710	NM_026324		Kirrel3	1500010O20Rik|2900036G11Rik|NEPH2|SST4|mKIAA1867	kin of IRRE like 3 (Drosophila)	protein-coding
unique_peak2-37459-7-5-0.214128329577033-1.01466476204226	chr5	90898301	90898686	+	0	NA	intron (NM_009654, intron 8 of 14)	intron (NM_009654, intron 8 of 14)	8578	NM_009654	11657	Mm.16773	NM_009654	ENSMUSG00000029368	Alb	Alb-1|Alb1	albumin	protein-coding
unique_peak1-3874-7-4-0.477162735410827-1.09384600808989	chr2	11777846	11778367	+	0	NA	Intergenic	L1Md_F2|LINE|L1	78726	NM_177268	320816	Mm.260201	NM_177268		Ankrd16	2810455F06Rik|AI646698|D430029B21Rik	ankyrin repeat domain 16	protein-coding
unique_peak2-38561-9-33--1.89784943484612-3.46696221776358	chr7	64287543	64288241	+	0	NA	intron (NM_008074, intron 3 of 9)	intron (NM_008074, intron 3 of 9)	354349	NM_008074	14407	Mm.434343	NM_008074		Gabrg3	B230362M20Rik|Gabrg-3	gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3	protein-coding
common_peak1-10821-25-22-0.338287949288093-0.51032171069054	chr14	99547700	99549021	+	0	NA	intron (NM_029320, intron 9 of 17)	intron (NM_029320, intron 9 of 17)	-49371	NM_028315	72662	Mm.163339	NM_028315	ENSMUSG00000033166	Dis3	2810028N01Rik	DIS3 mitotic control homolog (S. cerevisiae)	protein-coding
unique_peak2-34705-2-8--2.08737925770563-1.65811743852845	chr15	31223638	31224060	+	0	NA	3' UTR (NM_001164441, exon 4 of 4)	3' UTR (NM_001164441, exon 4 of 4)	69709	NM_146057	223453	Mm.222867	NM_146057	ENSMUSG00000039168	Dap	4921531N22Rik|AI789753|AU040360	death-associated protein	protein-coding
unique_peak1-1292-15-0-4.01216475055566-5.11750992628768	chr11	119814636	119815438	+	0	NA	intron (NM_130862, intron 1 of 13)	intron (NM_130862, intron 1 of 13)	10631	NM_130862	108100	Mm.197534	NM_130862	ENSMUSG00000025372	Baiap2	IRSp53|R75030	brain-specific angiogenesis inhibitor 1-associated protein 2	protein-coding
common_peak1-9067-10-9-0.0344872501214071-1.05503135781948	chr11	69095090	69095694	+	0	NA	Intergenic	Lx3_Mus|LINE|L1	41983	NM_172560	216846	Mm.28774	NM_172560	ENSMUSG00000032782	Cntrob	9830165K03Rik|Lip8	centrobin, centrosomal BRCA2 interacting protein	protein-coding
unique_peak1-3972-10-4-1.03448725012141-1.5150158574804	chr2	32447205	32447848	+	0	NA	intron (NM_011373, intron 2 of 4)	B4A|SINE|B4	4928	NM_011373	20448	Mm.27446	NM_011373	ENSMUSG00000079442	St6galnac4	SIAT7-D|ST6GalNAcIV|Siat7d	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4	protein-coding
common_peak2-21546-27-20-0.599228528116475-0.90781512069806	chr11	95982556	95983394	+	0	NA	Intergenic	Intergenic	-9699	NM_001271018	76815	Mm.296049	NM_029755	ENSMUSG00000006056	Calcoco2	2410154J16Rik|C77254|Ndp52|Ndp52l1	calcium binding and coiled-coil domain 2	protein-coding
common_peak1-17416-19-46--1.15190152501595-2.37649337096008	chr7	6155741	6156431	+	0	NA	intron (NM_178028, intron 2 of 5)	ID_B1|SINE|B4	7394	NM_178028	232836	Mm.246599	NM_178028	ENSMUSG00000034660	Galp	-	galanin-like peptide	protein-coding
common_peak2-22305-34-65--0.662325592357187-1.38301369789	chr13	19618829	19619915	+	0	NA	Intergenic	Intergenic	92327	NM_134065	105298	Mm.275054	NM_134065	ENSMUSG00000002808	Epdr1	AU040950|AV006210|Epdm2|Epdr2|MERP-1|MERP-2|MERP2|Ucc1	ependymin related protein 1 (zebrafish)	protein-coding
common_peak2-22154-19-13-0.595332404604082-0.713635438203849	chr12	86887812	86888518	+	0	NA	Intergenic	ID_B1|SINE|B4	-51890	NM_001205052	81703	Mm.103560	NM_030887	ENSMUSG00000034271	Jdp2	Jundm2|Jundp2|TIF	Jun dimerization protein 2	protein-coding
common_peak2-24344-22-27--0.160070816970199-0.317737750275047	chr17	5439748	5440456	+	0	NA	intron (NM_027457, intron 1 of 3)	intron (NM_027457, intron 1 of 3)	158	NM_027457	70544	Mm.46654	NM_027457	ENSMUSG00000004945	Tmem242	1110008A10Rik|2310046K16Rik|5730437N04Rik	transmembrane protein 242	protein-coding
common_peak2-30535-8-15--0.994777582052429-0.771068449301683	chr7	67644807	67645843	+	0	NA	Intergenic	MTD|LTR|MaLR	-360220	NM_001082962	20646	Mm.274995	NM_013670	ENSMUSG00000000948	Snrpn	2410045I01Rik|HCERN3|Peg4|Pwcr1|SMN	small nuclear ribonucleoprotein N	protein-coding
common_peak1-11383-8-15--0.994777582052429-0.771068449301683	chr15	97705326	97705763	+	0	NA	intron (NM_009504, intron 4 of 9)	L2a|LINE|L2	-30611	NM_001204278	56233	Mm.384027	NM_019572	ENSMUSG00000022475	Hdac7	5830434K02Rik|HD7|HD7a|Hdac7a|mFLJ00062	histone deacetylase 7	protein-coding
common_peak2-32203-8-10--0.454209200689727-1.078512453669	chr9	120110334	120110824	+	0	NA	Intergenic	B3A|SINE|B2	51719	NM_001039364	17433	Mm.486167	NM_008614	ENSMUSG00000032517	Mobp	AI835053|AI839848|MOBP155|MOBP170|MOBP69|MOBP73|MOBP81|R74645	myelin-associated oligodendrocytic basic protein	protein-coding
common_peak1-7546-25-39--0.460078189542257-0.621525249893804	chr1	36556226	36557200	+	0	NA	intron (NM_033570, intron 4 of 6)	intron (NM_033570, intron 4 of 6)	-12008	NM_001039551	94218	Mm.256323	NM_053186	ENSMUSG00000001138	Cnnm3	Acdp3|Clp3|mACDP3	cyclin M3	protein-coding
common_peak2-31149-13-15--0.221527969362231-0.308519316180257	chr8	41133735	41134415	+	0	NA	Intergenic	ORSL-2a|DNA|Tip100	238232	NM_030610	80857	Mm.425526	NM_030610	ENSMUSG00000031603	Fgf20	-	fibroblast growth factor 20	protein-coding
common_peak1-13729-23-23-0.136805003787924-0.340939137447793	chr2	32137310	32138265	+	0	NA	intron (NM_175190, intron 2 of 4)	intron (NM_175190, intron 2 of 4)	5802	NR_110965	72931	Mm.27344	NM_175190	ENSMUSG00000044627	Swi5	1500019F05Rik|2900010J23Rik|AI046671	SWI5 recombination repair homolog (yeast)	protein-coding
unique_peak2-36127-5-5--0.289342836727009-0.909929411522249	chr2	6378350	6378697	+	0	NA	Intergenic	Intergenic	104741	NM_181399	98910	Mm.40673	NM_181399	ENSMUSG00000039046	Usp6nl	AI316785|RNTRE|TRE2NL|mKIAA0019	USP6 N-terminal like	protein-coding
common_peak2-30515-11-8-0.338768582809301-1.14218153353838	chr7	65822747	65823175	+	0	NA	Intergenic	Intergenic	-90611	NM_009728	11982	Mm.135129	NM_009728	ENSMUSG00000025324	Atp10a	Atp10c|pfatp	ATPase, class V, type 10A	protein-coding
unique_peak2-37596-5-15--1.70438033600585-1.4372489031793	chr5	51607834	51608559	+	0	NA	Intergenic	Intergenic	336964	NR_027710	19017	Mm.259072	NM_008904	ENSMUSG00000029167	Ppargc1a	A830037N07Rik|ENSMUSG00000079510|Gm11133|PGC-1|PGC-1v|Pgc-1alpha|Pgc1|Pgco1|Ppargc1	peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	protein-coding
common_peak2-24148-36-37-0.231393572724169-0.470780655014941	chr16	38088945	38090032	+	0	NA	promoter-TSS (NR_033221)	promoter-TSS (NR_033221)	-142	NR_033221	414072	Mm.483602	NR_033221		BC031361	-	cDNA sequence BC031361	ncRNA
common_peak2-25748-16-20--0.274053780510699-0.353907621462756	chr19	28990368	28990909	+	0	NA	Intergenic	Intergenic	-47772	NM_028922	74411	Mm.441887	NM_028922	ENSMUSG00000040105	Ppapdc2	4932443D16Rik	phosphatidic acid phosphatase type 2 domain containing 2	protein-coding
unique_peak2-38171-5-5--0.289342836727009-0.909929411522249	chr6	89425140	89425559	+	0	NA	intron (NM_025351, intron 4 of 7)	Lx8|LINE|L1	-112742	NM_008881	18844	Mm.3789	NM_008881	ENSMUSG00000030084	Plxna1	2600013D04Rik|NOV|PlexA1|Plxn1|mKIAA4053	plexin A1	protein-coding
unique_peak2-37335-7-8--0.370834171144123-1.00793137938329	chr4	130360097	130360572	+	0	NA	intron (NM_011520, intron 1 of 4)	intron (NM_011520, intron 1 of 4)	11882	NM_011520	20970	Mm.206536	NM_011520	ENSMUSG00000025743	Sdc3	Synd3|mKIAA0468|syn-3	syndecan 3	protein-coding
unique_peak2-37560-4-8--1.19338551529556-1.21878474469819	chr5	32142033	32142558	+	0	NA	intron (NM_181281, intron 5 of 10)	intron (NM_181281, intron 5 of 10)	141872	NM_181282	107976	Mm.482126	NM_144541	ENSMUSG00000052139	Bre	6030405P19Rik|AI429776|B830038C02Rik	brain and reproductive organ-expressed protein	protein-coding
common_peak2-26042-34-16-1.29460568575093-2.92433603673115	chr2	13385363	13385997	+	0	NA	intron (NM_001081084, intron 14 of 66)	Lx6|LINE|L1	27823	NM_001081084	65969	Mm.313915	NM_001081084	ENSMUSG00000026726	Cubn	AA408369|AL022750|D2Wsu88e	cubilin (intrinsic factor-cobalamin receptor)	protein-coding
common_peak2-24596-11-9-0.186765489364251-0.344532117358383	chr17	32067604	32068036	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-75083	NM_010831	17691	Mm.290941	NM_010831	ENSMUSG00000024042	Sik1	Msk|Sik|Snf1lk	salt inducible kinase 1	protein-coding
common_peak2-29927-10-10--0.103016273628528-0.301029995663987	chr6	115510059	115510561	+	0	NA	intron (NM_199033, intron 5 of 11)	Tigger7|DNA|MER2_type	15588	NM_199033	381802	Mm.291208	NM_199033	ENSMUSG00000042389	Tsen2	AU067695	tRNA splicing endonuclease 2 homolog (S. cerevisiae)	protein-coding
unique_peak1-2112-14-2-2.31425365963649-3.28500101358144	chr15	41597560	41598246	+	0	NA	intron (NM_001130166, intron 3 of 16)	Lx|LINE|L1	-22677	NM_001130165	170719	Mm.254267	NM_130885	ENSMUSG00000022307	Oxr1	2210416C20Rik|C7|C7B	oxidation resistance 1	protein-coding
common_peak2-29753-6-6--0.241956811677302-0.947717972411649	chr6	86578289	86578701	+	0	NA	exon (NM_026414, exon 1 of 1)	exon (NM_026414, exon 1 of 1)	327	NM_026414	67855	Mm.183043	NM_026414	ENSMUSG00000033508	Asprv1	2300003P22Rik|AA986851|SASP|SASPase|Taps	aspartic peptidase, retroviral-like 1	protein-coding
common_peak1-14595-54-88--0.302647669336664-0.649046969219241	chr3	51339618	51340987	+	0	NA	intron (NM_080793, intron 4 of 7)	intron (NM_080793, intron 4 of 7)	-23377	NR_033624	100039684	Mm.387178	NR_033624	ENSMUSG00000097885	5031434O11Rik	AI481280|Gm2370	RIKEN cDNA 5031434O11 gene	ncRNA
common_peak1-14290-76-68-0.653419929085112-2.38216542170093	chr2	157565620	157567264	+	0	NA	intron (NM_025680, intron 1 of 15)	intron (NM_025680, intron 1 of 15)	3305	NM_025680	66642	Mm.45193	NM_025680	ENSMUSG00000027649	Ctnnbl1	5730471K09Rik|NAP|NYD-SP19|P14L	catenin, beta like 1	protein-coding
common_peak1-17412-21-41--0.822828157512525-1.27781945862486	chr7	5020280	5021313	+	0	NA	intron (NM_001205231, intron 5 of 11)	intron (NM_001205231, intron 5 of 11)	7051	NM_001205231	22185	Mm.360389	NM_133671	ENSMUSG00000030435	U2af2	65kDa	U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2	protein-coding
common_peak2-19770-9-14--0.717277189204299-0.53895475198017	chr1	82291713	82292147	+	0	NA	Intergenic	Intergenic	-3916	NM_010570	16367	Mm.4952	NM_010570	ENSMUSG00000055980	Irs1	G972R|IRS-1	insulin receptor substrate 1	protein-coding
unique_peak2-33674-2-7--1.91745425626332-1.45399745587252	chr11	101733503	101733949	+	0	NA	Intergenic	RSINE1|SINE|B4	21942	NM_010791	17285	Mm.3404	NM_010791	ENSMUSG00000001493	Meox1	AI385561|D330041M02Rik|Mox-1|Mox1	mesenchyme homeobox 1	protein-coding
unique_peak1-1024-8-1-2.00522241794757-2.05605744720049	chr11	75260128	75260578	+	0	NA	intron (NM_138950, intron 6 of 9)	B1_Mur4|SINE|Alu	-7350	NM_008878	18816	Mm.279733	NM_008878	ENSMUSG00000038224	Serpinf2	AI747498|Pli|Serpimf2	serine (or cysteine) peptidase inhibitor, clade F, member 2	protein-coding
common_peak1-17329-21-31--0.430510734733764-0.49501414494053	chr6	146724248	146725181	+	0	NA	3' UTR (NM_172734, exon 14 of 14)	3' UTR (NM_172734, exon 14 of 14)	-29338	NM_172309	272322	Mm.333500	NM_172309	ENSMUSG00000040187	Arntl2	4632430A05Rik|BMAL2|CLIF|MOP9|bHLHe6	aryl hydrocarbon receptor nuclear translocator-like 2	protein-coding
common_peak1-18836-10-17--0.813509656433543-0.699649909729472	chr9	14784079	14784501	+	0	NA	Intergenic	Intergenic	65632	NM_019482	55991	Mm.142253	NM_019482		Panx1	AI847747	pannexin 1	protein-coding
common_peak2-31465-104-133-0.238656010754386-0.767986926404586	chr8	105636444	105637851	+	0	NA	Intergenic	(TTCC)n|Simple_repeat|Simple_repeat	234287	NR_036588	69794	Mm.396139	NR_036588		1600027J07Rik	-	RIKEN cDNA 1600027J07 gene	ncRNA
common_peak1-8405-10-11--0.228547155712387-0.31137425193576	chr10	69350889	69351402	+	0	NA	intron (NM_170728, intron 16 of 40)	intron (NM_170728, intron 16 of 40)	-37135	NM_170687	11735	Mm.235960	NM_009670	ENSMUSG00000069601	Ank3	2900054D09Rik|AI314020|Ank-3|AnkG|Ankyrin-3|Ankyrin-G	ankyrin 3, epithelial	protein-coding
common_peak2-26575-22-27--0.160070816970199-0.317737750275047	chr2	104705039	104705819	+	0	NA	Intergenic	RMER19C|LTR|ERVK	-15422	NM_178695	228413	Mm.259609	NM_178695	ENSMUSG00000027171	Prrg4	9930111I18Rik|TMG4	proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	protein-coding
common_peak2-28865-7-9--0.522837264589173-1.05908390183068	chr5	75044808	75045269	+	0	NA	intron (NM_001159577, intron 2 of 10)	intron (NM_001159577, intron 2 of 10)	28859	NM_010727	16924	Mm.440403	NM_010727	ENSMUSG00000029228	Lnx1	Lnx	ligand of numb-protein X 1	protein-coding
common_peak1-10559-26-26-0.173011589994994-0.363124929330838	chr14	20702716	20703636	+	0	NA	intron (NM_001285908, intron 3 of 3)	intron (NM_001285908, intron 3 of 3)	45029	NR_105025	52512	Mm.483998	NR_105025		D14Ertd670e	-	DNA segment, Chr 14, ERATO Doi 670, expressed	ncRNA
unique_peak1-4363-9-8-0.0196884049619079-1.03275496310833	chr2	156456399	156456987	+	0	NA	intron (NM_001277187, intron 1 of 11)	L1M5|LINE|L1	17260	NM_001277186	228836	Mm.22094	NM_146128	ENSMUSG00000061689	Dlgap4	AI225853|BC024558|DAP-4|DAP4|SAPAP-4|Sapap4|WBP16	discs, large homolog-associated protein 4 (Drosophila)	protein-coding
common_peak2-22331-9-25--1.51082631173687-2.00244947055753	chr13	23551233	23551800	+	0	NA	intron (NM_013483, intron 7 of 7)	intron (NM_013483, intron 7 of 7)	6254	NM_013483	12231	Mm.1420	NM_013483	ENSMUSG00000000706	Btn1a1	Btn	butyrophilin, subfamily 1, member A1	protein-coding
common_peak2-31006-11-6-0.701338662194009-1.32595962126035	chr8	10865351	10865763	+	0	NA	Intergenic	Intergenic	16897	NR_040705	320014	Mm.403203	NR_040705		B930025P03Rik	-	RIKEN cDNA B930025P03 gene	ncRNA
common_peak1-15971-13-45--1.74508992541924-4.02188667233815	chr5	31613634	31614181	+	0	NA	intron (NM_144909, intron 16 of 18)	MTD|LTR|MaLR	13953	NM_144909	231103	Mm.100043	NM_144909	ENSMUSG00000059434	Gckr	GKRP	glucokinase regulatory protein	protein-coding
common_peak2-25934-8-8--0.164702583494742-1.00793137938329	chr19	46962685	46963359	+	0	NA	non-coding (NR_028353, exon 19 of 19)	non-coding (NR_028353, exon 19 of 19)	73819	NM_029810	76952	Mm.40965	NM_029810	ENSMUSG00000025041	Nt5c2	2010002I23Rik|CnII|ENSMUSG00000025039|Gm9751|Gmp|Nt5b|Pnt5|cN-II	5'-nucleotidase, cytosolic II	protein-coding
common_peak2-29539-76-148--0.45722413459888-1.59114833914605	chr6	38874784	38876992	+	0	NA	intron (NM_011539, intron 1 of 12)	B3|SINE|B2	6903	NM_011539	21391	Mm.4054	NM_011539	ENSMUSG00000029925	Tbxas1	CYP5|CYP5A1|THAS|TS|TXAS|TXS	thromboxane A synthase 1, platelet	protein-coding
common_peak2-21394-19-32--0.641706792696767-0.800403172662453	chr11	80377332	80378107	+	0	NA	intron (NM_177390, intron 20 of 21)	Lx8|LINE|L1	87171	NM_009871	12569	Mm.142275	NM_009871	ENSMUSG00000048895	Cdk5r1	Cdk5r|D11Bwg0379e|p25|p35	cyclin-dependent kinase 5, regulatory subunit 1 (p35)	protein-coding
common_peak2-27568-16-21--0.341167976369236-0.392630012299441	chr3	98057311	98058203	+	0	NA	Intergenic	RLTR13A|LTR|ERVK	-26597	NM_008256	15360	Mm.289131	NM_008256	ENSMUSG00000027875	Hmgcs2	1300002P16|mHS	3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2	protein-coding
common_peak1-17690-12-26--1.10611151707583-1.26025077975594	chr7	67951800	67952491	+	0	NA	Intergenic	Intergenic	-667040	NM_001082962	20646	Mm.274995	NM_013670	ENSMUSG00000000948	Snrpn	2410045I01Rik|HCERN3|Peg4|Pwcr1|SMN	small nuclear ribonucleoprotein N	protein-coding
common_peak1-14787-8-20--1.38709500483119-1.45476480588849	chr3	89430402	89430860	+	0	NA	intron (NM_080466, intron 3 of 7)	intron (NM_080466, intron 3 of 7)	-88313	NM_001038587	56417	Mm.316628	NM_019655	ENSMUSG00000027951	Adar	AV242451|Adar1|Adar1p110|Adar1p150|mZaADAR	adenosine deaminase, RNA-specific	protein-coding
common_peak2-28076-18-22--0.210642804828661-0.321718508207525	chr4	80910958	80912211	+	0	NA	Intergenic	Intergenic	177125	NM_010820	17475	Mm.153039	NM_010820	ENSMUSG00000028402	Mpdz	AI225843|B930003D11Rik|MUPP1	multiple PDZ domain protein	protein-coding
common_peak1-10939-23-10-1.26233588587178-1.90052685918624	chr15	12231792	12232766	+	0	NA	Intergenic	B4A|SINE|B4	-18972	NM_025673	66629	Mm.157655	NM_025673	ENSMUSG00000022200	Golph3	4733401N08Rik|5730410D03Rik|AW413496	golgi phosphoprotein 3	protein-coding
common_peak1-12179-22-31--0.352715894912595-0.440892966163086	chr17	31563734	31564628	+	0	NA	intron (NM_008804, intron 4 of 18)	intron (NM_008804, intron 4 of 18)	41002	NM_001163748	18585	Mm.10812	NM_008804	ENSMUSG00000041119	Pde9a	PDE9A1	phosphodiesterase 9A	protein-coding
unique_peak2-33739-4-10--1.48289213249054-1.5150158574804	chr11	116412501	116413015	+	0	NA	intron (NM_173755, intron 1 of 17)	intron (NM_173755, intron 1 of 17)	16704	NM_011451	20698	Mm.20944	NM_011451	ENSMUSG00000061878	Sphk1	1110006G24Rik|Sk1|Spk1	sphingosine kinase 1	protein-coding
common_peak1-18396-16-10-0.658832023630764-0.699649909729472	chr8	71668422	71669119	+	0	NA	Intergenic	PB1D10|SINE|Alu	-3918	NM_199364	211134	Mm.479807	NM_199364	ENSMUSG00000036306	Lzts1	F37|FEZ1	leucine zipper, putative tumor suppressor 1	protein-coding
common_peak2-19582-5-9--1.02630843089322-1.21398586181642	chr1	16241449	16241818	+	0	NA	intron (NM_001111272, intron 11 of 12)	intron (NM_001111272, intron 11 of 12)	145670	NM_133832	98711	Mm.274376	NM_133832		Rdh10	3110069K09Rik|4921506A21Rik|AI875664|AW549993|D1Ertd762e|m366Asp	retinol dehydrogenase 10 (all-trans)	protein-coding
common_peak2-25515-11-7-0.508693584251613-1.21681515183528	chr19	5692106	5692638	+	0	NA	intron (NM_022012, intron 3 of 11)	intron (NM_022012, intron 3 of 11)	3241	NM_022012	26403	Mm.185026	NM_022012	ENSMUSG00000004054	Map3k11	2610017K16Rik|Mlk3|PTK1|SPRK	mitogen-activated protein kinase kinase kinase 11	protein-coding
common_peak2-29447-47-77--0.350560794095701-0.704761247860639	chr6	17636895	17637816	+	0	NA	Intergenic	B3A|SINE|B2	-6639	NM_001289624	64213	Mm.12051	NM_022332	ENSMUSG00000029534	St7	9430001H04Rik|Fam4a2|HELG|RAY1|SEN4|TSG7	suppression of tumorigenicity 7	protein-coding
common_peak2-24057-38-39-0.249524564411168-0.503563708672202	chr16	25584983	25585987	+	0	NA	Intergenic	Intergenic	-98366	NM_001127259	22061	Mm.20894	NM_011641	ENSMUSG00000022510	Trp63	AI462811|Ket|P51/P63|P63|P73l|Tp63|Trp53rp1	transformation related protein 63	protein-coding
common_peak2-28755-39-96--0.984151595267974-3.66966533606566	chr5	43232614	43234426	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-391182	NM_175937	231207	Mm.7233	NM_175937	ENSMUSG00000039782	Cpeb2	A630055H10Rik|Cpe-bp2	cytoplasmic polyadenylation element binding protein 2	protein-coding
common_peak2-31591-10-10--0.103016273628528-0.301029995663987	chr8	121585081	121585467	+	0	NA	intron (NM_019707, intron 6 of 13)	MIRb|SINE|MIR	-283164	NM_024219	68196	Mm.358714	NM_024219	ENSMUSG00000031839	Hsbp1	0610007A03Rik|AA408769|Hsp25	heat shock factor binding protein 1	protein-coding
common_peak2-26999-9-5-0.604650905683064-1.21398586181642	chr2	170133378	170133754	+	0	NA	Intergenic	Intergenic	-48295	NR_040610	73303	Mm.443297	NR_040610	ENSMUSG00000086999	Bcas1os2	1700040N02Rik	breast carcinoma amplified sequence 1, opposite strand 2	ncRNA
unique_peak2-39412-13-20--0.613845392140992-0.532159081577619	chr9	35199096	35200067	+	0	NA	Intergenic	MERVL-int|LTR|ERVL	-60080	NM_021339	57810	Mm.80509	NM_021339	ENSMUSG00000038119	Cdon	CDO|Cd0|Orcam	cell adhesion molecule-related/down-regulated by oncogenes	protein-coding
common_peak1-7503-40-49-0.0151194929763738-0.309716464454027	chr1	15805547	15806469	+	0	NA	exon (NM_009352, exon 4 of 10)	exon (NM_009352, exon 4 of 10)	10281	NM_001286628	21749	Mm.4306	NM_009352		Terf1	Pin2|Trbf1|Trf1	telomeric repeat binding factor 1	protein-coding
common_peak1-12749-25-19-0.539921810457743-0.756750750680359	chr18	57805036	57805951	+	0	NA	intron (NM_029290, intron 5 of 6)	intron (NM_029290, intron 5 of 6)	-7254	NR_045360	70157	Mm.490532	NR_045360		2210409D07Rik	-	RIKEN cDNA 2210409D07 gene	ncRNA
common_peak1-16380-7-11--0.785871670422967-1.21681515183528	chr5	123136100	123136530	+	0	NA	intron (NM_001038845, intron 12 of 12)	intron (NM_001038845, intron 12 of 12)	-21251	NM_011026	18438	Mm.290884	NM_011026	ENSMUSG00000029470	P2rx4	AI504491|AW555605|D5Ertd444e|P2X4	purinergic receptor P2X, ligand-gated ion channel 4	protein-coding
unique_peak1-3122-9-1-2.18961340640422-2.31132995230379	chr18	35135799	35136365	+	0	NA	Intergenic	B3|SINE|B2	-22077	NM_010481	15526	Mm.209419	NM_010481	ENSMUSG00000024359	Hspa9	74kDa|Csa|Grp75|Hsc74|Hsp74|Hsp74a|Hspa9a|Mortalin|Mot-2|Mot2|Mthsp70|Pbp74	heat shock protein 9	protein-coding
unique_peak2-39388-4-11--1.6084230145744-1.68134727924692	chr9	21955627	21956065	+	0	NA	Intergenic	(TTTC)n|Simple_repeat|Simple_repeat	-5444	NM_001082532	66268	Mm.28924	NM_025457	ENSMUSG00000010607	Pigyl	1810008A14Rik|PIG-Y|Pigy	phosphatidylinositol glycan anchor biosynthesis, class Y-like	protein-coding
common_peak2-20158-20-28--0.369906210536379-0.457753417732779	chr1	170174284	170174998	+	0	NA	intron (NM_001291508, intron 2 of 7)	intron (NM_001291508, intron 2 of 7)	187659	NM_001291508	18514	Mm.43358	NM_008783	ENSMUSG00000052534	Pbx1	2310056B04Rik|D230003C07Rik|Pbx-1	pre B cell leukemia homeobox 1	protein-coding
unique_peak1-5546-7-5-0.214128329577033-1.01466476204226	chr5	142904400	142904883	+	0	NA	intron (NM_199068, intron 1 of 8)	ID_B1|SINE|B4	27190	NM_199068	17425	Mm.24214	NM_010812	ENSMUSG00000056493	Foxk1	A630048H08Rik|AI463295|ENSMUSG00000075577|Gm10868|Mnf	forkhead box K1	protein-coding
common_peak1-14591-19-13-0.595332404604082-0.713635438203849	chr3	50906001	50906974	+	0	NA	Intergenic	IAPEy-int|LTR|ERVK	-121882	NM_009834	12457	Mm.86541	NM_009834	ENSMUSG00000023087	Ccrn4l	AU043840|Ccr4|nocturnin	CCR4 carbon catabolite repression 4-like (S. cerevisiae)	protein-coding
unique_peak1-4961-9-0-3.18961340640422-3.01029995663981	chr4	99170800	99171281	+	0	NA	Intergenic	Intergenic	-151950	NM_010425	15221	Mm.4758	NM_010425	ENSMUSG00000067261	Foxd3	CWH3|Genesis|Hfh2	forkhead box D3	protein-coding
common_peak2-30258-9-11--0.395349094316936-0.344532117358383	chr7	12978276	12978847	+	0	NA	Intergenic	Intergenic	29279	NM_001033820	619331	Mm.361832	NM_001033820	ENSMUSG00000034071	Zfp551	9630004E07Rik|Znf551	zinc fingr protein 551	protein-coding
unique_peak1-5095-32-2-3.6941295184985-9.17270135773948	chr4	150000839	150002180	+	0	NA	Intergenic	Intergenic	24774	NM_173774	242773	Mm.29280	NM_173774		Slc45a1	C230078B22|Dnb5	solute carrier family 45, member 1	protein-coding
unique_peak1-3952-9-3-1.18961340640422-1.57096726280955	chr2	30212427	30212990	+	0	NA	intron (NM_001289710, intron 1 of 9)	intron (NM_001289710, intron 1 of 9)	2128	NM_139302	227700	Mm.33343	NM_139302	ENSMUSG00000026860	Sh3glb2	SPAS-1	SH3-domain GRB2-like endophilin B2	protein-coding
unique_peak2-33662-8-19--1.31670567693979-1.30305656033811	chr11	100472139	100472873	+	0	NA	intron (NM_019795, intron 1 of 13)	MT2B|LTR|ERVL	8976	NM_019795	56354	Mm.402409	NM_019795	ENSMUSG00000014195	Dnajc7	2010003F24Rik|2010004G07Rik|CCRP|Ttc2|mDj11|mTpr2	DnaJ (Hsp40) homolog, subfamily C, member 7	protein-coding
unique_peak1-1815-10-4-1.03448725012141-1.5150158574804	chr14	31128100	31128675	+	0	NA	intron (NM_001083616, intron 3 of 46)	intron (NM_001083616, intron 3 of 46)	38285	NM_001083616	12289	Mm.9772	NM_028981	ENSMUSG00000015968	Cacna1d	8430418G19Rik|C79217|Cacnl1a2|Cchl1a|Cchl1a2|D-LTCC	calcium channel, voltage-dependent, L type, alpha 1D subunit	protein-coding
common_peak2-30364-35-60--0.499367079100383-0.913104017362139	chr7	28377410	28379413	+	0	NA	intron (NM_001110208, intron 1 of 13)	intron (NM_001110208, intron 1 of 13)	1832	NM_001110208	11652	Mm.177194	NM_007434	ENSMUSG00000004056	Akt2	2410016A19Rik|AW554154|PKB|PKBbeta	thymoma viral proto-oncogene 2	protein-coding
common_peak2-27766-38-28-0.713471664170958-1.45748092439675	chr3	130708791	130709733	+	0	NA	Intergenic	Intergenic	-103953	NM_010703	16842	Mm.255219	NM_010703	ENSMUSG00000027985	Lef1	3000002B05|AI451430|Lef-1	lymphoid enhancer binding factor 1	protein-coding
common_peak1-18590-39-29-0.708870651310635-1.42714050806394	chr8	106563581	106564942	+	0	NA	Intergenic	Intergenic	-61264	NM_009868	12562	Mm.21767	NM_009868	ENSMUSG00000031871	Cdh5	7B4|AA408225|Cd144|VE-Cad|VECD|VEcad|Vec	cadherin 5	protein-coding
common_peak1-11565-36-37-0.231393572724169-0.470780655014941	chr16	13109406	13110628	+	0	NA	5' UTR (NM_015769, exon 1 of 11)	5' UTR (NM_015769, exon 1 of 11)	188	NM_015769	50505	Mm.287837	NM_015769		Ercc4	AI606920|Xpf	excision repair cross-complementing rodent repair deficiency, complementation group 4	protein-coding
unique_peak2-39304-9-7-0.18961340640422-1.05908390183068	chr8	123847508	123847943	+	0	NA	Intergenic	L1MB7|LINE|L1	196140	NM_008024	14241	Mm.5111	NM_008024	ENSMUSG00000097084	Foxl1	FREAC7|Fkh6|fkh-6	forkhead box L1	protein-coding
common_peak1-14706-74-146--0.483785767857757-1.76184816245401	chr3	69316106	69317105	+	0	NA	intron (NM_178726, intron 2 of 3)	intron (NM_178726, intron 2 of 3)	86277	NM_020026	26879	Mm.153710	NM_020026	ENSMUSG00000043300	B3galnt1	B3galt3|b3GT3	UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 1	protein-coding
common_peak1-13947-16-16-0.0308008010177225-0.307611222530525	chr2	91070565	91071341	+	0	NA	intron (NM_028119, intron 3 of 9)	B2_Mm2|SINE|B2	6270	NM_028119	107986	Mm.389334	NM_028119	ENSMUSG00000002109	Ddb2	2610043A19Rik	damage specific DNA binding protein 2	protein-coding
unique_peak1-4003-9-4-0.867685311516858-1.36011389749466	chr2	35674689	35675215	+	0	NA	intron (NR_040618, intron 1 of 2)	intron (NR_040618, intron 1 of 2)	242	NR_040618	77665	Mm.400558	NR_040618	ENSMUSG00000086449	9030204H09Rik	-	RIKEN cDNA 9030204H09 gene	ncRNA
unique_peak2-37696-5-14--1.61127093161437-1.95509489018123	chr5	100500085	100500653	+	0	NA	Intergenic	L2|LINE|L2	-6612	NR_045993	76003	Mm.447060	NR_045993	ENSMUSG00000086259	Tmem150cos	5830403M04Rik	transmembrane protein 150C, opposite strand	ncRNA
common_peak2-30739-34-60--0.548668810561621-0.994417253404935	chr7	118491257	118492019	+	0	NA	Intergenic	Intergenic	-225449	NR_015573	75479	Mm.381620	NR_015573		1700012D14Rik	-	RIKEN cDNA 1700012D14 gene	ncRNA
common_peak2-31961-5-5--0.289342836727009-0.909929411522249	chr9	65885304	65885652	+	0	NA	intron (NM_173185, intron 13 of 13)	intron (NM_173185, intron 13 of 13)	-22498	NM_011149	19035	Mm.335249	NM_011149	ENSMUSG00000032383	Ppib	AA408962|AA553318|AI844835|Cphn-2|Cphn2|CyP-20b	peptidylprolyl isomerase B	protein-coding
common_peak1-10222-11-28--1.34928741087596-1.9654245668484	chr13	51202549	51203091	+	0	NA	intron (NM_001283029, intron 1 of 5)	intron (NM_001283029, intron 1 of 5)	5904	NM_001283029	20729	Mm.188432	NM_011462	ENSMUSG00000021395	Spin1	Spin	spindlin 1	protein-coding
common_peak2-25823-19-11-0.81772482594053-0.991115276827166	chr19	38592773	38593344	+	0	NA	Intergenic	L1Md_T|LINE|L1	-5629	NM_019588	74055	Mm.34031	NM_019588	ENSMUSG00000024998	Plce1	4933403A21Rik|PLCepsilon|Plce|mKIAA1516	phospholipase C, epsilon 1	protein-coding
unique_peak1-2598-10-2-1.77145284428761-2.09384600808989	chr16	32130149	32130638	+	0	NA	Intergenic	Intergenic	30505	NM_025892	66994	Mm.22990	NM_025892	ENSMUSG00000035790	Cep19	1500031L02Rik|AI428934|AL022620	centrosomal protein 19	protein-coding
common_peak2-25920-30-15-1.16967540949187-2.23573970698983	chr19	46459400	46460022	+	0	NA	intron (NM_016860, intron 2 of 10)	intron (NM_016860, intron 2 of 10)	10514	NM_016860	54130	Mm.3118	NM_016860	ENSMUSG00000025228	Actr1a	Arp1|alpha-Arp1	ARP1 actin-related protein 1A, centractin alpha	protein-coding
unique_peak1-2360-7-2-1.21412832957703-1.45399745587252	chr15	86414536	86415031	+	0	NA	Intergenic	Intergenic	369894	NM_145476	223754	Mm.28904	NM_145476	ENSMUSG00000051864	Tbc1d22a	BC023106|D15Ertd781e	TBC1 domain family, member 22a	protein-coding
unique_peak1-4251-10-0-3.35641534500877-3.31132995230379	chr2	128408586	128409291	+	0	NA	Intergenic	RLTR6-int|LTR|ERV1	104193	NM_008569	17222	Mm.277408	NM_008569	ENSMUSG00000014355	Anapc1	2610021O03Rik|AI047775|AI853536|AW547281|Apc1|Mcpr|tsg24	anaphase promoting complex subunit 1	protein-coding
common_peak1-17624-34-49--0.261787662773458-0.418071017975767	chr7	45717681	45718928	+	0	NA	Intergenic	Intergenic	801600	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak2-36429-1-8--2.79698201165906-2.05605744720049	chr2	129297411	129297953	+	0	NA	intron (NM_177653, intron 3 of 6)	intron (NM_177653, intron 3 of 6)	64656	NM_177653	228592	Mm.452175	NM_177653	ENSMUSG00000043727	F830045P16Rik	Sirpb3	RIKEN cDNA F830045P16 gene	protein-coding
common_peak2-20414-10-5-0.771452844287613-1.33892459842472	chr10	25928554	25928971	+	0	NA	Intergenic	RodERV21-int|LTR|ERV1	-20751	NM_001013766	268288	Mm.213322	NM_001013766	ENSMUSG00000051354	Samd3	Gm623	sterile alpha motif domain containing 3	protein-coding
common_peak2-26580-32-48--0.335617824895548-0.503563708672202	chr2	105016292	105017658	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	-47524	NM_028747	74088	Mm.46188	NM_028747	ENSMUSG00000055312	Them7	0610012H03Rik	thioesterase superfamily member 7	protein-coding
common_peak1-15408-55-45-0.681057915095689-1.8512214539493	chr4	86668804	86670662	+	0	NA	intron (NM_172426, intron 7 of 10)	intron (NM_172426, intron 7 of 10)	149415	NM_139306	230379	Mm.45019	NM_139306	ENSMUSG00000038007	Acer2	2410116I05Rik|Asah3l|CRG-L1|maCER2	alkaline ceramidase 2	protein-coding
unique_peak1-2453-18-6-1.50556422917075-2.02801025126771	chr15	102572865	102573719	+	0	NA	Intergenic	Intergenic	4048	NR_104334	102216269		NR_104334		Cistr-act	Cistr	chondrogenic regulator lncRNA	ncRNA
common_peak1-10104-26-22-0.404337136101449-0.569352520859861	chr13	28629618	28630901	+	0	NA	intron (NR_045053, intron 7 of 8)	Lx7|LINE|L1	172483	NR_105787	102466635		NR_105787	miRBase:MI0021897	Mir6368	mmu-mir-6368	microRNA mir-6368	ncRNA
common_peak1-8547-15-16--0.075298090694683-0.301029995663976	chr10	93331982	93332663	+	0	NA	intron (NM_019648, intron 7 of 11)	B1_Mur1|SINE|Alu	21625	NM_019648	56307	Mm.289329	NM_019648	ENSMUSG00000036112	Metap2	4930584B20Rik|A930035J23Rik|AI047573|AL024412|AU014659|Amp2|Mnpep|p67|p67eIF2	methionine aminopeptidase 2	protein-coding
common_peak1-15149-9-18--1.05831410703937-0.965105923112245	chr3	145648567	145649077	+	0	NA	Intergenic	Intergenic	-2012	NM_001166064	214804	Mm.268854	NM_001166064	ENSMUSG00000036863	Syde2	C430017H16Rik	synapse defective 1, Rho GTPase, homolog 2 (C. elegans)	protein-coding
common_peak1-11366-72-86-0.22564031702359-0.597077845582964	chr15	93397498	93399569	+	0	NA	intron (NM_001033217, intron 1 of 7)	intron (NM_001033217, intron 1 of 7)	27789	NM_001033217	106042	Mm.150314	NM_001033217	ENSMUSG00000036158	Prickle1	1110058P22Rik|AW215793|Prickle|b2b019Clo|mpk1	prickle homolog 1 (Drosophila)	protein-coding
unique_peak2-36458-8-16--1.08224042330277-0.891319708951328	chr2	141545209	141545786	+	0	NA	intron (NM_001013802, intron 6 of 18)	intron (NM_001013802, intron 6 of 18)	-1048285	NM_178382	71436	Mm.426781	NM_178382	ENSMUSG00000051379	Flrt3	5530600M07Rik|C430047I10Rik|mKIAA1469	fibronectin leucine rich transmembrane protein 3	protein-coding
common_peak1-17982-20-34--0.641208232353773-0.863762398024911	chr7	133794409	133795341	+	0	NA	intron (NM_029339, intron 1 of 9)	B1_Mur2|SINE|Alu	2052	NM_029339	75565	Mm.45686	NM_029339	ENSMUSG00000030714	Ccdc101	1700023O11Rik|9530025I05Rik	coiled-coil domain containing 101	protein-coding
common_peak2-26609-29-33-0.0248272393647717-0.313805205020552	chr2	115581163	115582094	+	0	NA	intron (NM_207264, intron 10 of 10)	intron (NM_207264, intron 10 of 10)	117167	NR_035476	100316703		NR_035476		Mir1951	mmu-mir-1951	microRNA 1951	ncRNA
common_peak2-29494-83-86-0.471279129257399-1.59227420376343	chr6	31219633	31221020	+	0	NA	intron (NR_040257, intron 2 of 7)	(TA)n|Simple_repeat|Simple_repeat	49975	NR_040261	73652	Mm.441297	NR_040257	ENSMUSG00000087380	2210408F21Rik	-	RIKEN cDNA 2210408F21 gene	ncRNA
common_peak2-19545-40-88--0.816757748215299-2.46569628784776	chr1	165642199	165643340	+	0	NA	intron (NM_001143956, intron 2 of 3)	L1Md_T|LINE|L1	12594	NM_001143956	240879	Mm.484621	NM_001143956		Mettl11b	Gm207|NTM1B	methyltransferase like 11B	protein-coding
unique_peak2-35196-12-22--0.874785970969374-0.809260849721102	chr16	59639176	59639861	+	0	NA	promoter-TSS (NM_019665)	promoter-TSS (NM_019665)	-353	NM_019665	56297	Mm.392505	NM_019665	ENSMUSG00000022722	Arl6	1110018H24Rik|2210411E14Rik|BBS3	ADP-ribosylation factor-like 6	protein-coding
unique_peak2-37981-2-7--1.91745425626332-1.45399745587252	chr6	6016952	6017353	+	0	NA	intron (NM_015829, intron 14 of 17)	intron (NM_015829, intron 14 of 17)	-89759	NR_040255	72249	Mm.443268	NR_040255	ENSMUSG00000085416	1700019G24Rik	-	RIKEN cDNA 1700019G24 gene	ncRNA
common_peak2-26846-10-8-0.186490343566457-1.078512453669	chr2	154390566	154390898	+	0	NA	intron (NM_007891, intron 1 of 6)	intron (NM_007891, intron 1 of 6)	4430	NM_001291105	13555	Mm.18036	NM_007891	ENSMUSG00000027490	E2f1	E2F-1|mKIAA4009	E2F transcription factor 1	protein-coding
common_peak2-26294-50-60-0.110202978916066-0.363095533294599	chr2	31759681	31760593	+	0	NA	intron (NM_011836, intron 4 of 27)	intron (NM_011836, intron 4 of 27)	17336	NM_011836	23928	Mm.302362	NM_011836	ENSMUSG00000026840	Lamc3	AI562206|AW240805	laminin gamma 3	protein-coding
unique_peak2-38901-1-6--2.43441193227435-1.56314192529759	chr8	11633597	11633919	+	0	NA	intron (NM_133971, intron 1 of 5)	intron (NM_133971, intron 1 of 5)	1278	NR_030781	102334	Mm.12459	NM_133971	ENSMUSG00000031508	Ankrd10	4833425P12Rik|AW549277	ankyrin repeat domain 10	protein-coding
common_peak1-13599-71-97-0.0297343346047629-0.310950811460187	chr2	18671705	18673289	+	0	NA	Intergenic	Intergenic	51848	NM_001001334	381350	Mm.330024	NM_001001334		BC061194	-	cDNA sequence BC061194	protein-coding
unique_peak2-38192-7-21--1.66034078833911-1.89173646618541	chr6	98956181	98956871	+	0	NA	intron (NM_053202, intron 8 of 18)	intron (NM_053202, intron 8 of 18)	21766	NM_001197322	108655	Mm.234965	NM_053202	ENSMUSG00000030067	Foxp1	3110052D19Rik|4932443N09Rik|AI461938|AW494214	forkhead box P1	protein-coding
unique_peak1-2287-18-5-1.7279566505072-2.39372960542229	chr15	80026222	80027046	+	0	NA	intron (NM_010795, intron 1 of 1)	ORR1A2-int|LTR|MaLR	22483	NM_010795	17309	Mm.299693	NM_010795	ENSMUSG00000042428	Mgat3	1110038J12Rik|AI848272|GnT-III	mannoside acetylglucosaminyltransferase 3	protein-coding
common_peak2-24674-8-7-0.00522241794757061-1.00793137938329	chr17	37028651	37029031	+	0	NA	Intergenic	Intergenic	-1771	NM_001172168	195359	Mm.32606	NM_001033235	ENSMUSG00000073399	Trim40	Gm319|Gm35|Gm865	tripartite motif-containing 40	protein-coding
unique_peak2-36878-3-8--1.58390809140159-1.39487600375387	chr3	94742954	94743342	+	0	NA	intron (NM_009150, intron 5 of 11)	(TTTG)n|Simple_repeat|Simple_repeat	6143	NM_009150	20341	Mm.196558	NM_009150	ENSMUSG00000068874	Selenbp1	Lp56|Lpsb|SBP56	selenium binding protein 1	protein-coding
common_peak2-30935-82-195--0.721446699809474-4.33537676056687	chr8	11006922	11010152	+	0	NA	promoter-TSS (NM_001081212)	promoter-TSS (NM_001081212)	-107	NM_001081212	384783	Mm.407207	NM_001081212	ENSMUSG00000038894	Irs2	Irs-2	insulin receptor substrate 2	protein-coding
unique_peak2-32648-2-5--1.50241675698448-1.08602067057793	chr1	132147577	132147828	+	0	NA	Intergenic	ETnERV2-int|LTR|ERVK	171874	NM_007827	13137	Mm.436759	NM_007827	ENSMUSG00000026401	Daf2	AI323748|Cd55b|Daf|Daf-TM|TM-DAF	decay accelerating factor 2	protein-coding
common_peak2-20570-6-5--0.0195643903408542-0.947717972411649	chr10	76257815	76258186	+	0	NA	intron (NM_021568, intron 7 of 15)	intron (NM_021568, intron 7 of 15)	-69211	NM_009933	12833	Mm.2509	NM_009933	ENSMUSG00000001119	Col6a1	AI747156|Col6a-1	collagen, type VI, alpha 1	protein-coding
common_peak1-17947-12-26--1.10611151707583-1.26025077975594	chr7	127691329	127691893	+	0	NA	Intergenic	Intergenic	-49528	NR_024324	78552	Mm.289190	NR_024324		E130201H02Rik	-	Y box protein 1 pseudogene	pseudo
common_peak1-13133-107-71-1.18412193123108-8.51586518171839	chr19	9104911	9108123	+	0	NA	intron (NR_104460, intron 4 of 6)	PB1D10|SINE|Alu	42743	NM_001286518	66395	Mm.203866	NM_009643	ENSMUSG00000069833	Ahnak	DY6	AHNAK nucleoprotein (desmoyokin)	protein-coding
common_peak1-16646-85-35-1.78547824668234-11.769327051662	chr6	90996360	90998398	+	0	NA	intron (NM_018815, intron 20 of 39)	intron (NM_018815, intron 20 of 39)	69441	NM_018815	54563	Mm.28162	NM_018815	ENSMUSG00000030091	Nup210	9830001L10|AI836801|Pom210|gp190|gp210	nucleoporin 210	protein-coding
common_peak2-28218-15-14-0.105274154947137-0.330004445983672	chr4	118409262	118409924	+	0	NA	Intergenic	Intergenic	2457	NM_146852	258851	Mm.377719	NM_146852	ENSMUSG00000070820	Olfr1339	MOR258-2	olfactory receptor 1339	protein-coding
common_peak2-28287-16-22--0.405298313788951-0.440610794044987	chr4	129877245	129878045	+	0	NA	Intergenic	Intergenic	21894	NM_001034872	332942	Mm.387701	NM_001034872	ENSMUSG00000023120	Gm853	OTTMUSG00000009560	predicted gene 853	protein-coding
common_peak1-11197-56-109--0.545763888085417-1.67315279398724	chr15	77840460	77842261	+	0	NA	intron (NM_007583, intron 2 of 3)	ORR1B1|LTR|MaLR	-40106	NM_018749	55944	Mm.3955	NM_018749	ENSMUSG00000016554	Eif3d	66/67kDa|AA407891|Eif3s7|eIF3p66	eukaryotic translation initiation factor 3, subunit D	protein-coding
common_peak1-8514-10-19--0.965512749878593-0.917676348953458	chr10	84392140	84392653	+	0	NA	intron (NM_001013441, intron 2 of 8)	B2_Mm2|SINE|B2	12038	NM_183172	237422	Mm.18936	NM_183172		Ric8b	BC051080|Ric-8|Ric-8b	resistance to inhibitors of cholinesterase 8 homolog B (C. elegans)	protein-coding
common_peak2-31982-30-43--0.289756209145424-0.435893058718175	chr9	69989296	69990106	+	0	NA	promoter-TSS (NM_029784)	promoter-TSS (NM_029784)	-337	NM_029784	76886	Mm.44355	NM_029784	ENSMUSG00000032224	Fam81a	6430514L14Rik	family with sequence similarity 81, member A	protein-coding
common_peak2-20713-11-17--0.661231417190699-0.58239619684445	chr10	94514645	94515254	+	0	NA	Intergenic	Intergenic	-107737	NM_018797	54712	Mm.256712	NM_018797	ENSMUSG00000074785	Plxnc1	2510048K12Rik|AW742158|CD232|Vespr	plexin C1	protein-coding
unique_peak1-7388-16-6-1.31090872021046-1.49151883326344	chrX	96132894	96133723	+	0	NA	5' UTR (NM_207633, exon 1 of 7)	5' UTR (NM_207633, exon 1 of 7)	188	NM_207633	77929	Mm.212290	NM_207633	ENSMUSG00000047694	Yipf6	A430107J06Rik	Yip1 domain family, member 6	protein-coding
unique_peak1-292-6-5--0.0195643903408542-0.947717972411649	chr1	121482517	121483026	+	0	NA	intron (NM_145506, intron 16 of 24)	intron (NM_145506, intron 16 of 24)	60040	NM_146103	226351	Mm.439806	NM_146103	ENSMUSG00000098923	Tmem185b	2500001K11Rik	transmembrane protein 185B	protein-coding
common_peak1-8310-8-11--0.579740082773585-1.14218153353838	chr10	40521514	40522039	+	0	NA	intron (NM_177793, intron 4 of 4)	L1_Mus1|LINE|L1	81173	NM_027879	71713	Mm.46063	NM_027879	ENSMUSG00000038446	Cdc40	1200003H23Rik|EHB3|PRP17	cell division cycle 40	protein-coding
unique_peak1-5719-12-1-2.64877598508764-3.36932189928148	chr6	41558054	41558618	+	0	NA	intron (NM_007680, intron 1 of 17)	intron (NM_007680, intron 1 of 17)	2855	NM_007680	13848	Mm.271976	NM_007680	ENSMUSG00000029869	Ephb6	Cekl|Mep	Eph receptor B6	protein-coding
common_peak2-31283-5-9--1.02630843089322-1.21398586181642	chr8	72191831	72192267	+	0	NA	Intergenic	L1_Mus4|LINE|L1	13594	NM_001177527	636741	Mm.480188	NM_001177527	ENSMUSG00000091764	Zfp964	4732490P12|EG636741|Gm7187	zinc finger protein 964	protein-coding
unique_peak2-37433-2-6--1.72480917832092-1.26211192963361	chr4	150973398	150973770	+	0	NA	intron (NM_001081557, intron 3 of 23)	ID4|SINE|ID	262293	NM_001081557	100072	Mm.318846	NM_001081557	ENSMUSG00000014592	Camta1	1810059M14Rik|2310058O09Rik|AI316882|AW987475|mKIAA0833	calmodulin binding transcription activator 1	protein-coding
common_peak1-14661-134-330--0.626117898027792-5.71369385748962	chr3	58413379	58416834	+	0	NA	Intergenic	Lx2|LINE|L1	26023	NM_001081262	545527	Mm.357722	NM_001081262	ENSMUSG00000070471	Erich6	4932431H17Rik|Fam194a	glutamate rich 6	protein-coding
unique_peak1-1974-8-1-2.00522241794757-2.05605744720049	chr14	120330730	120331066	+	0	NA	Intergenic	Lx5|LINE|L1	110759	NM_001001490	239283	Mm.138520	NM_001001490	ENSMUSG00000044819	Oxgr1	Cysltr3|Gm299|Gpr80|Gpr99|P2Y15	oxoglutarate (alpha-ketoglutarate) receptor 1	protein-coding
common_peak1-12965-72-53-0.91369631070885-3.72310471574325	chr19	3574834	3576280	+	0	NA	intron (NM_029456, intron 1 of 22)	CpG	192	NM_001164159	52036	Mm.284686	NM_028999	ENSMUSG00000024908	Ppp6r3	4930528G08Rik|9130026N02Rik|D19Bwg1430e|D19Ertd703e|Pp6r3|Ppcs3|Pptcs3|Sapl|Saps3|mKIAA1558	protein phosphatase 6, regulatory subunit 3	protein-coding
common_peak2-29171-10-14--0.550475250599749-0.446472590016315	chr5	134551874	134552466	+	0	NA	Intergenic	B3A|SINE|B2	-23448	NM_030719	80909	Mm.45218	NM_030719		Gatsl2	7530428J21Rik|AW742413|Gats|Gatsl1	GATS protein-like 2	protein-coding
common_peak2-31357-16-17--0.0516613591742505-0.301029995663984	chr8	84744089	84744883	+	0	NA	Intergenic	Intergenic	181999	NM_001254747	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak1-11826-13-32--1.26592208872068-1.87214134458702	chr16	78301888	78302466	+	0	NA	intron (NM_001025192, intron 1 of 6)	CpG	261	NM_001276263	13052	Mm.66222	NM_009988	ENSMUSG00000022865	Cxadr	2610206D03Rik|AU016810|AW553441|CAR|MCAR|MCVADR	coxsackie virus and adenovirus receptor	protein-coding
common_peak2-20472-13-5-1.19350952991661-1.95509489018123	chr10	43983133	43983570	+	0	NA	Intergenic	Intergenic	-4813	NM_053069	11793	Mm.22264	NM_053069	ENSMUSG00000038160	Atg5	2010107M05Rik|3110067M24Rik|AW319544|Apg5l|Atg5l|C88337|Paddy	autophagy related 5	protein-coding
unique_peak2-32668-6-21--1.894033508257-2.21753093801298	chr1	135794276	135795385	+	0	NA	intron (NM_001160421, intron 5 of 5)	intron (NM_001160421, intron 5 of 5)	8920	NM_054076	269120	Mm.59985	NM_054076	ENSMUSG00000010311	Optc	-	opticin	protein-coding
unique_peak1-4091-12-1-2.64877598508764-3.36932189928148	chr2	71759059	71759655	+	0	NA	Intergenic	Intergenic	48076	NM_172665	228026	Mm.34411	NM_172665	ENSMUSG00000006494	Pdk1	B830012B01|D530020C15Rik	pyruvate dehydrogenase kinase, isoenzyme 1	protein-coding
unique_peak1-289-13-2-2.19350952991661-3.03832868024006	chr1	120266876	120267562	+	0	NA	Intergenic	RMER6B|LTR|ERVK	-18416	NM_001293300	76707	Mm.138740	NM_029709	ENSMUSG00000064302	Clasp1	1700030C23Rik|5730583A19Rik|B130045P17Rik|CLASP1alpha	CLIP associating protein 1	protein-coding
common_peak1-17998-42-34-0.613046310922218-1.29674067475645	chr7	139363137	139364331	+	0	NA	Intergenic	Intergenic	-17310	NM_018867	55987	Mm.471654	NM_018867	ENSMUSG00000030862	Cpxm2	4632435C11Rik|CPX-2|Cpx2	carboxypeptidase X 2 (M14 family)	protein-coding
common_peak2-26863-11-9-0.186765489364251-0.344532117358383	chr2	155805268	155805741	+	0	NA	exon (NM_001130000, exon 20 of 33)	exon (NM_001130000, exon 20 of 33)	23210	NM_177217	16328	Mm.288729	NM_008383	ENSMUSG00000038241	Cep250	AW490617|B230210E21Rik|Cep2|Inmp	centrosomal protein 250	protein-coding
common_peak1-12953-42-31-0.742329327867184-1.66944648069025	chr19	53411497	53412964	+	0	NA	intron (NM_010847, intron 2 of 5)	Lx8|LINE|L1	7294	NM_001008543	17859	Mm.2154	NM_010847	ENSMUSG00000025025	Mxi1	ENSMUSG00000067085|Gm10197|Mad2|bHLHc11	Max interacting protein 1	protein-coding
common_peak2-21059-43-44-0.290710089194028-0.566980988816338	chr11	48799703	48801111	+	0	NA	exon (NM_011579, exon 2 of 2)	exon (NM_011579, exon 2 of 2)	5341	NM_011579	21822	Mm.15793	NM_011579	ENSMUSG00000078922	Tgtp1	Gtp2|Irgb6|Mg21|Tgtp	T cell specific GTPase 1	protein-coding
common_peak2-27794-13-15--0.221527969362231-0.308519316180257	chr3	138443135	138443528	+	0	NA	intron (NR_121195, intron 1 of 7)	GA-rich|Low_complexity|Low_complexity	38159	NM_019571	56224	Mm.31927	NM_019571	ENSMUSG00000028152	Tspan5	2810455A09Rik|4930505M03Rik|NET-4|Tm4sf9	tetraspanin 5	protein-coding
common_peak1-11417-31-68--0.883285785965046-2.31837299254143	chr15	99393010	99393778	+	0	NA	Intergenic	Intergenic	-16093	NM_009699	11827	Mm.20206	NM_009699	ENSMUSG00000023013	Aqp2	AQP-CD|WCH-CD|cph|jpk	aquaporin 2	protein-coding
common_peak1-13591-14-6-1.09186123830004-1.16633110333236	chr2	16983773	16984352	+	0	NA	Intergenic	Intergenic	-48709	NR_040632	75069	Mm.50378	NR_040632		4930515L03Rik	-	RIKEN cDNA 4930515L03 gene	ncRNA
common_peak1-10653-21-14-0.662598669657717-0.879255460030357	chr14	47374760	47375490	+	0	NA	Intergenic	Intergenic	-5091	NM_028222	72391	Mm.272394	NM_028222	ENSMUSG00000037628	Cdkn3	2410006H10Rik|KAP	cyclin-dependent kinase inhibitor 3	protein-coding
common_peak1-9012-24-35--0.376715098674596-0.470271536760928	chr11	60726746	60727307	+	0	NA	intron (NM_025294, intron 1 of 2)	CpG	268	NM_025294	24083	Mm.22780	NM_025294	ENSMUSG00000018931	Natd1	AI256713|F3-2|Gm16515|Gtlf3b	N-acetyltransferase domain containing 1	protein-coding
common_peak2-32418-11-22--1.0148683718054-1.11267835143409	chrX	162887777	162888457	+	0	NA	intron (NM_025432, intron 3 of 4)	intron (NM_025432, intron 3 of 4)	9360	NM_025432	66226	Mm.279752	NM_025432		Trappc2	1110066L09Rik|1810064C02Rik|AW496358|MIP-2A|Sedl|TRS20	trafficking protein particle complex 2	protein-coding
unique_peak1-2280-7-1-1.79909083029819-1.80617997398389	chr15	79339384	79339799	+	0	NA	Intergenic	MIRc|SINE|MIR	-3920	NM_008427	16520	Mm.140760	NM_008427	ENSMUSG00000044216	Kcnj4	IRK3|Kcnf2|MB-IRK3	potassium inwardly-rectifying channel, subfamily J, member 4	protein-coding
common_peak2-22806-84-148--0.284234461573136-0.845545722785187	chr14	14012221	14013583	+	0	NA	intron (NR_121588, intron 2 of 3)	intron (NR_121588, intron 2 of 3)	104250	NR_121589	328354	Mm.252404	NM_177813	ENSMUSG00000051729	Gm5087	C630025C03|EG328354	predicted gene 5087	ncRNA
common_peak2-21950-29-27-0.304935158557507-0.525808162491371	chr12	31654338	31655354	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	58312	NM_013709	24057	Mm.218624	NM_013709	ENSMUSG00000020669	Sh3yl1	AI314953|Ray|YSC84	Sh3 domain YSC-like 1	protein-coding
common_peak2-19668-21-39--0.752438829621127-1.08405458203116	chr1	54925693	54926738	+	0	NA	intron (NM_001081433, intron 1 of 27)	RLTR12B|LTR|ERVK	57016	NM_001081433	329154	Mm.397910	NM_001081433	ENSMUSG00000052331	Ankrd44	4930444A19Rik|A130096K20|E130014H08Rik|PP6-ARS-B	ankyrin repeat domain 44	protein-coding
common_peak2-30214-92-115-0.234371088575193-0.682997994597616	chr7	126975967	126977221	+	0	NA	intron (NM_028129, intron 10 of 13)	PB1D10|SINE|Alu	38893	NM_001004187	434234	Mm.38237	NM_028129	ENSMUSG00000030924	2610020H08Rik	-	RIKEN cDNA 2610020H08 gene	protein-coding
unique_peak1-126-8-1-2.00522241794757-2.05605744720049	chr1	64229084	64229554	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-61356	NM_033563	93691	Mm.29466	NM_033563	ENSMUSG00000025959	Klf7	9830124P08Rik	Kruppel-like factor 7 (ubiquitous)	protein-coding
unique_peak2-36714-2-4--1.23938235115068-0.931118710592187	chr3	51908294	51908718	+	0	NA	5' UTR (NM_001004176, exon 1 of 5)	5' UTR (NM_001004176, exon 1 of 5)	422	NM_001004176	433586	Mm.234972	NM_001004176	ENSMUSG00000061143	Maml3	AV234550|BC049812|Mam-2|mKIAA1816	mastermind like 3 (Drosophila)	protein-coding
unique_peak1-3302-9-8-0.0196884049619079-1.03275496310833	chr18	76173293	76173828	+	0	NA	intron (NM_145356, intron 3 of 4)	intron (NM_145356, intron 3 of 4)	84565	NR_045365	73009	Mm.443541	NR_045365		2900057B20Rik	-	RIKEN cDNA 2900057B20 gene	ncRNA
common_peak2-30165-62-67-0.323288617551746-0.764984435653934	chr6	148211431	148212094	+	0	NA	intron (NM_198967, intron 12 of 19)	MTEa|LTR|MaLR	-50866	NM_001286560	67456	Mm.59812	NM_026168	ENSMUSG00000030304	Ergic2	1200009B18Rik|4930572C01Rik|AA408438|Ptx1	ERGIC and golgi 2	protein-coding
unique_peak1-5317-10-1-2.35641534500877-2.57096726280955	chr5	77382577	77383030	+	0	NA	intron (NM_025939, intron 1 of 8)	intron (NM_025939, intron 1 of 8)	-2200	NM_172146	231327	Mm.202337	NM_172146	ENSMUSG00000029246	Ppat	5730454C12Rik|AA408689|AA675351|AI507113|C79945	phosphoribosyl pyrophosphate amidotransferase	protein-coding
unique_peak1-4127-12-8-0.478850983645327-0.562038191119709	chr2	90553266	90554047	+	0	NA	intron (NM_021512, intron 23 of 36)	B1_Mur2|SINE|Alu	-31871	NM_018828	55935	Mm.489638	NM_018828	ENSMUSG00000008200	Fnbp4	FBP30|Fnbp30|mKIAA1014	formin binding protein 4	protein-coding
unique_peak1-2929-12-6-0.841421063030034-1.58711810488664	chr17	54153933	54154577	+	0	NA	Intergenic	MurERV4-int|LTR|ERVK	-24299	NM_018751	20888	Mm.10108	NM_018751	ENSMUSG00000023943	Sult1c1	(PST)G|P-SULT|ST1C1|Stp2|Sult1a2|mOLFST	sulfotransferase family, cytosolic, 1C, member 1	protein-coding
common_peak2-29548-42-55--0.0650255941904199-0.303022200133692	chr6	40470948	40472064	+	0	NA	Intergenic	Intergenic	-1999	NM_026317	67690	Mm.52550	NM_026317	ENSMUSG00000029909	Prss37	1700016G05Rik|Tryx2	protease, serine 37	protein-coding
common_peak2-23097-19-14-0.495796731053168-0.607095980551316	chr14	76786670	76787417	+	0	NA	Intergenic	Intergenic	-28585	NM_207652	21807	Mm.153272	NM_009366	ENSMUSG00000022010	Tsc22d1	AA589566|AW105905|Egr5|TSC-22|Tgfb1i4|Tsc|Tsc22	TSC22 domain family, member 1	protein-coding
unique_peak2-33381-13-23--0.806490470083387-0.781208772652439	chr11	45944253	45945104	+	0	NA	intron (NM_009616, intron 13 of 22)	intron (NM_009616, intron 13 of 22)	28906	NR_106177	102465996		NR_106177		Mir8100	mmu-mir-8100	microRNA mir-8100	ncRNA
common_peak1-12268-8-16--1.08224042330277-0.891319708951328	chr17	42939696	42940161	+	0	NA	intron (NM_009847, intron 16 of 17)	ORR1B1|LTR|MaLR	-60800	NM_001033493	435529	Mm.136350	NM_001033493	ENSMUSG00000057899	Gpr111	PGR20	G protein-coupled receptor 111	protein-coding
unique_peak1-1940-9-3-1.18961340640422-1.57096726280955	chr14	79482795	79483276	+	0	NA	intron (NM_027906, intron 28 of 44)	intron (NM_027906, intron 28 of 44)	164139	NM_001033215	105590	Mm.486536	NM_001033215	ENSMUSG00000071262	Zfp957	AU017455	zinc finger protein 957	protein-coding
unique_peak1-6565-7-1-1.79909083029819-1.80617997398389	chr7	132607731	132607943	+	0	NA	Intergenic	L1_Mm|LINE|L1	19703	NM_029842	77035	Mm.307239	NM_029842	ENSMUSG00000030752	Kdm8	3110005O21Rik|Jmjd5	lysine (K)-specific demethylase 8	protein-coding
common_peak2-25798-33-37-0.0834100490819436-0.326417267106726	chr19	37375580	37376462	+	0	NA	intron (NM_031156, intron 11 of 23)	intron (NM_031156, intron 11 of 23)	29082	NM_031156	15925	Mm.28366	NM_031156	ENSMUSG00000056999	Ide	1300012G03Rik|4833415K22Rik|AA675336|AI507533	insulin degrading enzyme	protein-coding
unique_peak2-34581-5-10--1.16381195464315-1.33892459842472	chr14	69280226	69280863	+	0	NA	Intergenic	Intergenic	-6645	NM_183366	13522	Mm.117450	NM_010082	ENSMUSG00000014725	Adam28	C130072N01Rik|D430033C21Rik|Dtgn1|MDC-L|MDC-Lm|MDC-Ls|MDCL|TECADAM|eMDCII	a disintegrin and metallopeptidase domain 28	protein-coding
common_peak2-31973-17-19--0.103631756682325-0.301029995663974	chr9	67484607	67485256	+	0	NA	Intergenic	Intergenic	-77421	NM_001081242	70549	Mm.33645	NM_027458	ENSMUSG00000052698	Tln2	5730421P04Rik|AI507121|AI787438|AL118320|mKIAA0320	talin 2	protein-coding
common_peak2-22997-32-41--0.113225403559101-0.311888488969622	chr14	59200678	59202016	+	0	NA	Intergenic	ORR1C1|LTR|MaLR	509824	NM_013518	14180	Mm.8846	NM_013518		Fgf9	Eks	fibroblast growth factor 9	protein-coding
common_peak1-17274-8-7-0.00522241794757061-1.00793137938329	chr6	135048976	135049468	+	0	NA	Intergenic	Intergenic	19079	NM_053118	93746	Mm.49902	NM_053118	ENSMUSG00000030205	Gprc5d	-	G protein-coupled receptor, family C, group 5, member D	protein-coding
unique_peak1-4597-10-4-1.03448725012141-1.5150158574804	chr3	60569542	60570092	+	0	NA	Intergenic	HAL1-3A_ME|LINE|L1	-236890	NM_008772	18441	Mm.281452	NM_008772	ENSMUSG00000027765	P2ry1	P2Y1	purinergic receptor P2Y, G-protein coupled 1	protein-coding
unique_peak1-430-8-2-1.42025991722641-1.65811743852845	chr1	162181579	162182101	+	0	NA	intron (NM_001038621, intron 3 of 8)	intron (NM_001038621, intron 3 of 8)	-38817	NM_009786	12301	Mm.10702	NM_009786	ENSMUSG00000014226	Cacybp	SIP	calcyclin binding protein	protein-coding
common_peak2-24411-20-27--0.319280137466411-0.412012472183092	chr17	15497666	15498415	+	0	NA	Intergenic	Intergenic	-6615	NR_033511	100038481	Mm.387544	NR_033511		Gm10510	ENSMUSG00000073453	predicted gene 10510	ncRNA
unique_peak1-6112-25-8-1.69192490390279-3.04993787975775	chr6	127326332	127327422	+	0	NA	Intergenic	MIR|SINE|MIR	-68892	NR_073373	232386	Mm.257367	NR_073373		D130058E03	-	uncharacterized D130058E03	ncRNA
unique_peak2-33191-2-5--1.50241675698448-1.08602067057793	chr10	100486762	100487176	+	0	NA	Intergenic	L1Md_F2|LINE|L1	431949	NM_001081246	66605	Mm.72646	NM_001081246	ENSMUSG00000056912	1700017N19Rik	-	RIKEN cDNA 1700017N19 gene	protein-coding
common_peak1-12705-62-81-0.0531994541840008-0.321961876121209	chr18	46280030	46281398	+	0	NA	Intergenic	MTD|LTR|MaLR	-75800	NR_040342	107003	Mm.395148	NR_040342		A330093E20Rik	AU043608	RIKEN cDNA A330093E20 gene	ncRNA
unique_peak2-32781-3-11--1.99894559068043-1.95434855131066	chr1	179517594	179518026	+	0	NA	Intergenic	MTA_Mm-int|LTR|MaLR	55264	NR_037994	75589	Mm.86666	NR_037994		2310043L19Rik	-	RIKEN cDNA 2310043L19 gene	ncRNA
unique_peak1-551-8-2-1.42025991722641-1.65811743852845	chr1	193383091	193383634	+	0	NA	intron (NM_029766, intron 7 of 14)	intron (NM_029766, intron 7 of 14)	16051	NM_029766	76843	Mm.189102	NM_029766	ENSMUSG00000037474	Dtl	2810047L02Rik|5730564G15Rik|Ramp	denticleless homolog (Drosophila)	protein-coding
common_peak1-16820-29-10-1.65285846197781-3.49519823291232	chr6	48395325	48396379	+	0	NA	promoter-TSS (NM_001085417)	promoter-TSS (NM_001085417)	-28	NM_001085417	68910	Mm.2464	NM_020589	ENSMUSG00000068551	Zfp467	1190001I08Rik|AB041616|AI426952|AV017623|EZI|Znf467	zinc finger protein 467	protein-coding
common_peak2-24349-14-17--0.270708841084668-0.328191099940267	chr17	5977304	5978086	+	0	NA	intron (NM_001113352, intron 2 of 25)	intron (NM_001113352, intron 2 of 25)	2109	NM_011523	20975	Mm.236068	NM_011523	ENSMUSG00000023805	Synj2	AI481647|SJ2|mKIAA0348	synaptojanin 2	protein-coding
unique_peak2-38917-13-15--0.221527969362231-0.308519316180257	chr8	14965772	14966688	+	0	NA	intron (NM_172751, intron 18 of 28)	RLTR9F|LTR|ERVK	-44795	NM_029116	74901	Mm.46675	NM_029116	ENSMUSG00000055675	Kbtbd11	2900016B01Rik|4930465M17Rik|mKIAA0711	kelch repeat and BTB (POZ) domain containing 11	protein-coding
common_peak2-32285-36-55--0.328033835889849-0.518540604135986	chrX	20687885	20688925	+	0	NA	Intergenic	Lx3B|LINE|L1	-22050	NM_183185	245368	Mm.220470	NM_183185	ENSMUSG00000031079	Zfp300	D930016N04Rik	zinc finger protein 300	protein-coding
unique_peak2-38201-9-13--0.617741515653384-0.459837087125828	chr6	112477569	112478395	+	0	NA	Intergenic	(CATATA)n|Simple_repeat|Simple_repeat	-38180	NM_001081147	18430	Mm.333310	NM_001081147	ENSMUSG00000049112	Oxtr	OTR	oxytocin receptor	protein-coding
unique_peak1-2909-8-4-0.683294323060208-1.21878474469819	chr17	46854568	46855074	+	0	NA	intron (NM_145488, intron 3 of 16)	intron (NM_145488, intron 3 of 16)	6409	NM_145488	224824	Mm.299399	NM_145488	ENSMUSG00000002763	Pex6	AI132582|D130055I09Rik|mKIAA4177	peroxisomal biogenesis factor 6	protein-coding
unique_peak2-39363-5-7--0.704380336005853-1.01466476204226	chr9	9201745	9202175	+	0	NA	intron (NM_027823, intron 1 of 22)	L1_Mus1|LINE|L1	-34328	NR_045754	100579151	Mm.412450	NR_045754		Gm16833	-	predicted gene, 16833	ncRNA
unique_peak2-34401-8-5-0.420259917226415-1.10484139239135	chr14	7816664	7817089	+	0	NA	Intergenic	Intergenic	43087	NM_001164727	100038847	Mm.443041	NM_001164727	ENSMUSG00000093985	Gm10406	ENSMUSG00000072735	predicted gene 10406	protein-coding
common_peak1-9511-11-9-0.186765489364251-0.344532117358383	chr11	114981341	114982082	+	0	NA	exon (NM_001169153, exon 4 of 7)	exon (NM_001169153, exon 4 of 7)	13595	NM_001169153	246746	Mm.277387	NM_145634	ENSMUSG00000047798	Cd300lf	CLIM1|CLM-1|CLM1|Digr2|F730004D16Rik|IREM1|IgSF13|LMIR3|Pigr3	CD300 antigen like family member F	protein-coding
unique_peak1-6466-9-1-2.18961340640422-2.31132995230379	chr7	105409356	105409793	+	0	NA	intron (NM_025408, intron 3 of 10)	intron (NM_025408, intron 3 of 10)	48463	NM_025408	66190	Mm.334041	NM_025408	ENSMUSG00000030760	Acer3	1110057L18Rik|5430429L08Rik|AV015045|Phca	alkaline ceramidase 3	protein-coding
common_peak2-32327-12-23--0.936186515633517-0.912223620338476	chrX	73786973	73787759	+	0	NA	Intergenic	Intergenic	60897	NM_001201395	74987	Mm.107996	NM_001201395	ENSMUSG00000079525	4930468A15Rik	-	RIKEN cDNA 4930468A15 gene	protein-coding
common_peak1-12098-194-240-0.475233739689531-3.72497517404421	chr17	25272367	25274696	+	0	NA	intron (NM_011930, intron 1 of 24)	intron (NM_011930, intron 1 of 24)	3192	NM_011930	26373	Mm.270587	NM_011930	ENSMUSG00000036636	Clcn7	AA409691|AW538136|ClC-7|D17Wsu51e	chloride channel 7	protein-coding
unique_peak1-5344-12-4-1.32684789020028-2.04196296489515	chr5	91206360	91207027	+	0	NA	Intergenic	Intergenic	5232	NM_019932	56744	Mm.332490	NM_019932	ENSMUSG00000029373	Pf4	Cxcl4|Scyb4	platelet factor 4	protein-coding
common_peak2-31231-11-7-0.508693584251613-1.21681515183528	chr8	69974532	69974897	+	0	NA	Intergenic	Intergenic	-39943	NM_008673	17960	Mm.14125	NM_008673	ENSMUSG00000025588	Nat1	Nat-1	N-acetyl transferase 1	protein-coding
common_peak1-12012-76-186--0.784950074024355-4.71627990304079	chr17	15009285	15011144	+	0	NA	intron (NM_175173, intron 23 of 24)	intron (NM_175173, intron 23 of 24)	69915	NM_175173	71682	Mm.122698	NM_175173	ENSMUSG00000046991	Wdr27	0610012K18Rik	WD repeat domain 27	protein-coding
unique_peak2-33861-5-26--2.45926783816932-3.68490442130631	chr12	20699386	20700189	+	0	NA	Intergenic	L1Md_F2|LINE|L1	121853	NR_015521	69513	Mm.273972	NR_015521		1700030C10Rik	-	RIKEN cDNA 1700030C10 gene	ncRNA
common_peak1-9070-71-94-0.0745885703890234-0.34133178638415	chr11	69367708	69369692	+	0	NA	3' UTR (NM_007911, exon 5 of 5)	3' UTR (NM_007911, exon 5 of 5)	5039	NM_007911	13643	Mm.249637	NM_007911	ENSMUSG00000003934	Efnb3	EFL-6|ELF-3|Elk-L3|Epl8|LERK-8|NLERK-2	ephrin B3	protein-coding
unique_peak2-37740-3-7--1.41398308995928-1.23214870625617	chr5	110135820	110136189	+	0	NA	Intergenic	(CCCTAA)n|Simple_repeat|Simple_repeat	127157	NR_027964	667213	Mm.454429	NR_027964		Gm10416	EG667213|ENSMUSG00000072761	zinc finger protein pseudogene	pseudo
common_peak1-14417-17-30--0.735899972181837-0.841847921495509	chr2	180119160	180119998	+	0	NA	promoter-TSS (NR_045331)	promoter-TSS (NR_045331)	-730	NR_045331	622283	Mm.447602	NR_045331		Gm6307	EG622283	predicted gene 6307	ncRNA
common_peak2-24830-38-95--1.01350984142263-3.71858791457821	chr17	72836556	72837645	+	0	NA	intron (NM_007439, intron 1 of 28)	intron (NM_007439, intron 1 of 28)	116547	NM_007439	11682	Mm.311854	NM_007439	ENSMUSG00000055471	Alk	CD246|Tcrz	anaplastic lymphoma kinase	protein-coding
common_peak2-24174-12-6-0.841421063030034-1.58711810488664	chr16	45946153	45946553	+	0	NA	Intergenic	Lx8|LINE|L1	64173	NM_001134480	433022	Mm.380993	NM_001134480	ENSMUSG00000087141	Plcxd2	AW494639|EG433022	phosphatidylinositol-specific phospholipase C, X domain containing 2	protein-coding
unique_peak1-2290-12-1-2.64877598508764-3.36932189928148	chr15	80104502	80105226	+	0	NA	Intergenic	Intergenic	-10128	NM_175109	66538	Mm.39485	NM_175109	ENSMUSG00000051518	Rps19bp1	2510038A11Rik|AI604923|S19BP	ribosomal protein S19 binding protein 1	protein-coding
unique_peak1-7020-12-4-1.32684789020028-2.04196296489515	chr8	126542508	126543086	+	0	NA	intron (NM_133966, intron 1 of 4)	B1F|SINE|Alu	2412	NM_133966	102162	Mm.291777	NM_133966	ENSMUSG00000038697	Taf5l	1110005N04Rik|AI849020	TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor	protein-coding
common_peak1-10646-13-9-0.456543935750406-0.53895475198017	chr14	46969752	46970505	+	0	NA	Intergenic	Intergenic	-29071	NR_037981	100041724	Mm.383311	NM_001099324	ENSMUSG00000079261	Gm15217	OTTMUSG00000019524	predicted gene 15217	ncRNA
common_peak2-31349-9-14--0.717277189204299-0.53895475198017	chr8	84269736	84270350	+	0	NA	intron (NM_001297593, intron 4 of 23)	intron (NM_001297593, intron 4 of 23)	403582	NM_001297593	234515	Mm.324468	NM_001024617	ENSMUSG00000037940	Inpp4b	E130107I17Rik	inositol polyphosphate-4-phosphatase, type II	protein-coding
common_peak2-22632-34-45--0.141493429055747-0.323497957212832	chr13	90088873	90090386	+	0	NA	intron (NM_028012, intron 6 of 7)	L1_Mur2|LINE|L1	139584	NM_028012	108138	Mm.37531	NM_028012	ENSMUSG00000021615	Xrcc4	2310057B22Rik|AW413319|AW545101	X-ray repair complementing defective repair in Chinese hamster cells 4	protein-coding
common_peak2-30722-7-7--0.200909169701811-0.97990265578305	chr7	114066314	114066691	+	0	NA	Intergenic	RLTR10|LTR|ERVK	8788	NM_001011542	258173	Mm.453832	NM_001011542	ENSMUSG00000073899	Olfr1532-ps1	MOR260-6P|MOR260-9P|Olfr708	olfactory receptor 1532, pseudogene 1	protein-coding
unique_peak2-34712-9-8-0.0196884049619079-1.03275496310833	chr15	34306460	34307097	+	0	NA	intron (NM_016762, intron 4 of 18)	B3A|SINE|B2	-19151	NM_001256161	77358	Mm.402759	NM_001256161		9430069I07Rik	-	RIKEN cDNA 9430069I07 gene	protein-coding
common_peak2-24468-16-20--0.274053780510699-0.353907621462756	chr17	24352064	24352618	+	0	NA	3' UTR (NM_028056, exon 10 of 10)	3' UTR (NM_028056, exon 10 of 10)	5373	NM_028056	72016	Mm.23881	NM_028056	ENSMUSG00000024118	1600002H07Rik	-	RIKEN cDNA 1600002H07 gene	protein-coding
unique_peak1-3924-27-3-2.99154595089524-6.39086136203966	chr2	26132498	26133630	+	0	NA	intron (NM_177841, intron 6 of 9)	PB1D9|SINE|Alu	17013	NM_177841	329366	Mm.77712	NM_177841	ENSMUSG00000048038	4932418E24Rik	-	RIKEN cDNA 4932418E24 gene	protein-coding
unique_peak2-36087-4-9--1.34538860874061-1.36011389749466	chr19	56451281	56451716	+	0	NA	intron (NM_008733, intron 11 of 41)	intron (NM_008733, intron 11 of 41)	13030	NM_198059	18175	Mm.386769	NM_008733	ENSMUSG00000049134	Nrap	-	nebulin-related anchoring protein	protein-coding
unique_peak1-801-8-1-2.00522241794757-2.05605744720049	chr11	3348092	3348522	+	0	NA	intron (NM_145355, intron 1 of 7)	RSINE1|SINE|B4	-4133	NR_028317	71523	Mm.72795	NM_027820	ENSMUSG00000034587	8430429K09Rik	-	RIKEN cDNA 8430429K09 gene	ncRNA
common_peak1-10760-11-8-0.338768582809301-1.14218153353838	chr14	70176416	70177165	+	0	NA	intron (NM_020275, intron 5 of 7)	B1_Mm|SINE|Alu	9511	NM_020275	21933	Mm.193430	NM_020275	ENSMUSG00000022074	Tnfrsf10b	DR5|KILLER|Ly98|MK|TRAILR2|TRICK2A|TRICK2B|TRICKB	tumor necrosis factor receptor superfamily, member 10b	protein-coding
unique_peak1-5282-11-4-1.18676548936425-1.68134727924692	chr5	66095164	66095686	+	0	NA	Intergenic	Intergenic	-6330	NM_001081321	71521	Mm.278974	NM_027818	ENSMUSG00000029202	Pds5a	9030416H16Rik|E230024D05Rik|mKIAA0648	PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	protein-coding
common_peak2-20889-21-9-1.24756117037887-1.83731222263754	chr11	3535520	3536018	+	0	NA	Intergenic	Intergenic	11770	NR_110490	544752	Mm.390314	NR_002321	ENSMUSG00000056579	Tug1	AI316828	taurine upregulated gene 1	ncRNA
unique_peak2-33475-4-4--0.345388608740609-0.864171920961574	chr11	69409093	69409506	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	10163	NM_013415	11932	Mm.235204	NM_013415	ENSMUSG00000041329	Atp1b2	Amog|Atpb-2	ATPase, Na+/K+ transporting, beta 2 polypeptide	protein-coding
unique_peak2-37693-11-19--0.813234510635749-0.769930178837768	chr5	100039829	100040596	+	0	NA	intron (NR_030692, intron 1 of 3)	intron (NR_030692, intron 1 of 3)	117867	NR_030692	319818	Mm.295233	NR_030692	ENSMUSG00000089809	A930011G23Rik	-	RIKEN cDNA A930011G23 gene	ncRNA
common_peak2-29835-22-29--0.259606490521114-0.36542888694933	chr6	94499984	94500985	+	0	NA	intron (NM_026255, intron 5 of 9)	intron (NM_026255, intron 5 of 9)	50176	NM_026255	67582	Mm.280725	NM_026255	ENSMUSG00000045100	Slc25a26	4930433D19Rik|4933433F13Rik|AW557176|D6Bwg0781e|Slc25a6	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 26	protein-coding
unique_peak1-391-10-5-0.771452844287613-1.33892459842472	chr1	153299735	153300273	+	0	NA	intron (NM_026876, intron 10 of 14)	B1_Mus1|SINE|Alu	10481	NR_106150	102466847		NR_106150		Mir7682	mmu-mir-7682	microRNA mir-7682	ncRNA
common_peak2-27279-9-9--0.132314688483142-1.03275496310833	chr3	57429086	57429606	+	0	NA	Intergenic	Intergenic	26260	NM_175095	52245	Mm.21901	NM_175095		Commd2	1190017G07Rik|AI047739|D3Ertd176e|HSPC042	COMM domain containing 2	protein-coding
unique_peak2-33357-2-6--1.72480917832092-1.26211192963361	chr11	31736507	31736959	+	0	NA	Intergenic	Intergenic	-12186	NR_102312	414116	Mm.150222	NR_102310	ENSMUSG00000085772	D630024D03Rik	-	RIKEN cDNA D630024D03 gene	ncRNA
unique_peak1-5706-10-1-2.35641534500877-2.57096726280955	chr6	38346006	38346604	+	0	NA	intron (NM_153600, intron 7 of 17)	intron (NM_153600, intron 7 of 17)	14781	NM_153600	264134	Mm.253446	NM_153600	ENSMUSG00000056832	Ttc26	9330141E21Rik|9430097H08Rik	tetratricopeptide repeat domain 26	protein-coding
common_peak2-28022-22-28--0.210696890040167-0.337923771396236	chr4	48472785	48473680	+	0	NA	intron (NM_172304, intron 6 of 15)	intron (NM_172304, intron 6 of 15)	13062	NM_172304	269536	Mm.272025	NM_172304	ENSMUSG00000028345	Tex10	2610206N19Rik|2810462N03Rik|BC006867	testis expressed gene 10	protein-coding
unique_peak2-32683-3-10--1.87341470859657-1.75805390616669	chr1	138344222	138344588	+	0	NA	Intergenic	Intergenic	-20020	NM_001287179	381293	Mm.458468	NM_001081258	ENSMUSG00000041498	Kif14	D1Ertd367e|E130203M01	kinesin family member 14	protein-coding
unique_peak1-6103-15-1-3.01216475055566-4.18809100057339	chr6	125470444	125471025	+	0	NA	Intergenic	Intergenic	-25961	NM_007657	12527	Mm.210676	NM_007657	ENSMUSG00000030342	Cd9	Tspan29	CD9 antigen	protein-coding
unique_peak2-35568-2-5--1.50241675698448-1.08602067057793	chr17	69536547	69536839	+	0	NA	intron (NM_013813, intron 1 of 21)	intron (NM_013813, intron 1 of 21)	30543	NM_013813	13823	Mm.131135	NM_013813	ENSMUSG00000024044	Epb4.1l3	4.1B|DAL1P|Dal1|Epb41l3|NBL3	erythrocyte protein band 4.1-like 3	protein-coding
common_peak2-21296-11-11--0.0762689164695427-0.301029995663976	chr11	72441418	72441940	+	0	NA	intron (NM_025985, intron 1 of 5)	B1_Mm|SINE|Alu	20916	NM_025985	67128	Mm.458052	NM_025985	ENSMUSG00000020794	Ube2g1	2700059C12Rik|AI256795|AU014992|AW552068|D130023C12Rik	ubiquitin-conjugating enzyme E2G 1	protein-coding
common_peak2-26438-12-5-1.06381348436648-1.78669045979184	chr2	68934784	68935157	+	0	NA	intron (NM_172856, intron 8 of 9)	intron (NM_172856, intron 8 of 9)	-38887	NM_181547	329416	Mm.90047	NM_181547	ENSMUSG00000034738	Nostrin	Daip2|mDaIP2	nitric oxide synthase trafficker	protein-coding
unique_peak2-34734-4-8--1.19338551529556-1.21878474469819	chr15	39020055	39020592	+	0	NA	Intergenic	Intergenic	-9509	NM_001256382	116838	Mm.309296	NM_053271		Rims2	2810036I15Rik|AW048769|RIM2|Rab3ip2|Rim2(+40A)|Rim2(+44A)|Rim2(+4A)|Serg2|Syt3-rs|mKIAA0751	regulating synaptic membrane exocytosis 2	protein-coding
common_peak1-13473-23-10-1.26233588587178-1.90052685918624	chr2	144440903	144441781	+	0	NA	intron (NM_025314, intron 2 of 5)	intron (NM_025314, intron 2 of 5)	15653	NM_025314	66044	Mm.28109	NM_025314	ENSMUSG00000027430	Dtd1	0610006H08Rik|DUE-B|Hars2	D-tyrosyl-tRNA deacylase 1	protein-coding
common_peak1-8077-32-18-1.03116450577607-2.02129774107186	chr1	178368398	178369836	+	0	NA	Intergenic	Intergenic	-163674	NM_176916	319455	Mm.338001	NM_176916	ENSMUSG00000055214	Pld5	B230365F16Rik	phospholipase D family, member 5	protein-coding
unique_peak2-38071-6-5--0.0195643903408542-0.947717972411649	chr6	48841641	48841916	+	0	NA	Intergenic	L1MB8|LINE|L1	-3476	NM_029638	76507	Mm.213898	NM_029638	ENSMUSG00000029811	Aoc1	1600012D06Rik|Abp1|DAO	amine oxidase, copper-containing 1	protein-coding
common_peak1-17838-15-11-0.4272022498345-0.503257505534083	chr7	110221697	110222393	+	0	NA	Intergenic	IAPEY3-int|LTR|ERVK	-11989	NM_147054	259056	Mm.377813	NM_147054	ENSMUSG00000073959	Olfr584	MOR30-2	olfactory receptor 584	protein-coding
unique_peak1-598-12-3-1.64877598508764-2.36932189928148	chr10	19118572	19119106	+	0	NA	Intergenic	Intergenic	42494	NM_053008	94222	Mm.156946	NM_053008	ENSMUSG00000045591	Olig3	Bhlhb7|bHLHe20	oligodendrocyte transcription factor 3	protein-coding
common_peak1-10048-24-25-0.0927701846266249-0.337923771396236	chr13	17992514	17993414	+	0	NA	intron (NM_019491, intron 1 of 4)	intron (NM_019491, intron 1 of 4)	43087	NM_019491	56044	Mm.27348	NM_019491	ENSMUSG00000008859	Rala	3010001O15Rik|AW322615|Ral|Rasl1	v-ral simian leukemia viral oncogene homolog A (ras related)	protein-coding
common_peak2-28914-10-9-0.0344872501214071-1.05503135781948	chr5	92497943	92498281	+	0	NA	intron (NM_001080796, intron 3 of 10)	RMER6A|LTR|ERVK	13831	NM_001080797	23881	Mm.290530	NM_011816	ENSMUSG00000029405	G3bp2	AA409541|E430034L04Rik|G3BP|mKIAA0660	GTPase activating protein (SH3 domain) binding protein 2	protein-coding
common_peak1-15644-14-14--0.00767443525087419-0.308519316180257	chr4	134923581	134924259	+	0	NA	Intergenic	Intergenic	-14791	NM_001130477	51796	Mm.1963	NM_016799	ENSMUSG00000028809	Srrm1	AA407769|POP101|Srm160	serine/arginine repetitive matrix 1	protein-coding
common_peak2-26814-36-39-0.157392991280392-0.394172396164276	chr2	151494282	151494933	+	0	NA	promoter-TSS (NM_001276400)	promoter-TSS (NM_001276400)	-338	NM_001276400	668929	Mm.473683	NM_001114677	ENSMUSG00000074704	Rad21l	Gm14160|MeiRAD21L|Rad21l1	RAD21-like (S. pombe)	protein-coding
common_peak1-9529-17-9-0.896368243317676-1.09394599973099	chr11	115969829	115970787	+	0	NA	intron (NM_001205081, intron 1 of 5)	intron (NM_001205081, intron 1 of 5)	1241	NM_001205081	217333	Mm.347770	NM_172570	ENSMUSG00000020773	Trim47	2210023F24Rik	tripartite motif-containing 47	protein-coding
common_peak2-29370-109-130-0.352736680349751-1.30455974218952	chr6	17693428	17695068	+	0	NA	intron (NM_001289629, intron 1 of 14)	intron (NM_001289629, intron 1 of 14)	656	NM_001289627	64213	Mm.12051	NM_022332	ENSMUSG00000029534	St7	9430001H04Rik|Fam4a2|HELG|RAY1|SEN4|TSG7	suppression of tumorigenicity 7	protein-coding
common_peak1-17749-19-46--1.15190152501595-2.37649337096008	chr7	82866282	82867193	+	0	NA	intron (NM_029332, intron 19 of 36)	intron (NM_029332, intron 19 of 36)	-126487	NM_001122780	207952	Mm.206223	NM_029652	ENSMUSG00000055652	Klhl25	2810402K13Rik|BC027373|Enc-1	kelch-like 25	protein-coding
unique_peak2-35561-11-22--1.0148683718054-1.11267835143409	chr17	66100758	66101603	+	0	NA	intron (NM_133685, intron 1 of 6)	intron (NM_133685, intron 1 of 6)	20912	NM_133685	106572	Mm.29274	NM_133685	ENSMUSG00000056515	Rab31	1700093E07Rik|AI415285|Rab22B	RAB31, member RAS oncogene family	protein-coding
unique_peak2-35571-5-4--0.0263084308932156-0.909929411522249	chr17	70752059	70752302	+	0	NA	Intergenic	Intergenic	-21952	NM_177639	224997	Mm.311840	NM_027712	ENSMUSG00000003279	Dlgap1	4933422O14Rik|9630002F18|AI845682|AI848168|BB075781|D17Bwg0511e|GKAP/SAPAP|GKPA/SAPAP|Gkap|Sapap1|mKIAA4162	discs, large (Drosophila) homolog-associated protein 1	protein-coding
unique_peak2-39526-0-5--3.42509343119537-1.32905871926422	chr9	65598765	65599135	+	0	NA	intron (NM_172536, intron 2 of 9)	RMER1B|Other|Other	74595	NM_001301307	18247	Mm.116749	NM_010952	ENSMUSG00000040652	Oaz2	AZ-2|AZ2|Oaz2-ps|Sez15	ornithine decarboxylase antizyme 2	protein-coding
unique_peak2-35674-5-5--0.289342836727009-0.909929411522249	chr18	12121276	12121679	+	0	NA	Intergenic	Intergenic	-122530	NR_035447	100316686		NR_035447	miRBase:MI0008328	Mir1901	Mirn1901|mmu-mir-1901	microRNA 1901	ncRNA
unique_peak1-3631-24-3-2.79320990276772-5.35253599412607	chr19	37528529	37529386	+	0	NA	Intergenic	Lx2B|LINE|L1	19626	NM_008245	15242	Mm.33896	NM_008245		Hhex	Hex|Hex1|Hhex-rs2|Prh|Prhx	hematopoietically expressed homeobox	protein-coding
unique_peak1-3693-16-1-3.11826364226806-4.46429741251234	chr19	43599556	43600366	+	0	NA	promoter-TSS (NM_010324)	promoter-TSS (NM_010324)	-866	NM_010324	14718	Mm.19039	NM_010324	ENSMUSG00000025190	Got1	AI789014|Got-1|cAspAT|cCAT	glutamate oxaloacetate transaminase 1, soluble	protein-coding
common_peak2-32322-12-12--0.0516637330534535-0.309718203022949	chrX	73468055	73468670	+	0	NA	Intergenic	Intergenic	-41283	NM_001013760	238829	Mm.292319	NM_001013760	ENSMUSG00000071738	Gm4937	EG238829	predicted gene 4937	protein-coding
common_peak1-13497-30-71--1.00024959195044-2.83340810606923	chr2	35978785	35979893	+	0	NA	intron (NM_001159635, intron 3 of 5)	intron (NM_001159635, intron 3 of 5)	-12579	NM_026422	67871	Mm.378232	NM_026422	ENSMUSG00000026887	Mrrf	2400002D02Rik|MRFF|MTRRF|RRF	mitochondrial ribosome recycling factor	protein-coding
common_peak1-13468-47-54-0.153481711241888-0.393610822453554	chr19	61266353	61267336	+	0	NA	Intergenic	B4A|SINE|B4	-14632	NM_001177513	633057	Mm.426097	NM_001177513	ENSMUSG00000094649	Gm7102	EG633057	predicted gene 7102	protein-coding
unique_peak1-3950-10-2-1.77145284428761-2.09384600808989	chr2	29770660	29771155	+	0	NA	intron (NM_013615, intron 13 of 16)	intron (NM_013615, intron 13 of 16)	-20022	NM_028923	74412	Mm.275121	NM_028923		Gle1	4933405K21Rik|AA553313|Gle1l	GLE1 RNA export mediator (yeast)	protein-coding
unique_peak2-35037-3-8--1.58390809140159-1.39487600375387	chr16	30064327	30064677	+	0	NA	promoter-TSS (NM_008235)	promoter-TSS (NM_008235)	-941	NM_008235	15205	Mm.390859	NM_008235	ENSMUSG00000022528	Hes1	Hry|bHLHb39	hairy and enhancer of split 1 (Drosophila)	protein-coding
unique_peak1-4098-9-5-0.604650905683064-1.21398586181642	chr2	73312619	73313106	+	0	NA	intron (NM_153138, intron 1 of 7)	intron (NM_153138, intron 1 of 7)	10948	NM_001289723	215280	Mm.223504	NM_153138	ENSMUSG00000075284	Wipf1	AI115543|D2Ertd120e|WIP|Waspip	WAS/WASL interacting protein family, member 1	protein-coding
common_peak2-26871-15-23--0.5727977501655-0.575340103425218	chr2	156143981	156144861	+	0	NA	intron (NM_027585, intron 1 of 12)	RMER6A|LTR|ERVK	-5981	NM_020255	19018	Mm.389346	NM_020255	ENSMUSG00000046229	Scand1	2310003H23Rik|Leap1|PGC-2|Ppargc2	SCAN domain-containing 1	protein-coding
unique_peak1-2658-12-3-1.64877598508764-2.36932189928148	chr16	52334106	52334679	+	0	NA	intron (NM_009655, intron 1 of 15)	intron (NM_009655, intron 1 of 15)	118718	NM_009655	11658	Mm.288282	NM_009655	ENSMUSG00000022636	Alcam	AI853494|BEN|CD166|DM-GRASP|MuSC|SC1	activated leukocyte cell adhesion molecule	protein-coding
common_peak2-19648-7-6--0.00826409175941478-0.97990265578305	chr1	43819447	43819720	+	0	NA	intron (NM_026430, intron 10 of 14)	intron (NM_026430, intron 10 of 14)	32136	NM_024283	78896	Mm.50109	NM_024283	ENSMUSG00000026051	1500015O10Rik	Ecrg4	RIKEN cDNA 1500015O10 gene	protein-coding
unique_peak2-34966-6-5--0.0195643903408542-0.947717972411649	chr15	97828388	97828807	+	0	NA	intron (NM_001113515, intron 6 of 52)	intron (NM_001113515, intron 6 of 52)	6558	NM_031163	12824	Mm.2423	NM_031163	ENSMUSG00000022483	Col2a1	Col2|Col2a|Col2a-1|Del1|Dmm|Lpk|M100856|Rgsc856	collagen, type II, alpha 1	protein-coding
common_peak1-13899-24-9-1.47128180788035-2.52428350728854	chr2	78059976	78060857	+	0	NA	Intergenic	Intergenic	-17288	NM_177843	329436	Mm.235448	NM_177843		Gm14461	A830093M07|OTTMUSG00000016703	predicted gene 14461	protein-coding
common_peak2-24135-27-31--0.00845404910476422-0.304476922018591	chr16	35938348	35939305	+	0	NA	exon (NM_001013371, exon 1 of 5)	exon (NM_001013371, exon 1 of 5)	270	NM_030253	80285	Mm.49074	NM_030253	ENSMUSG00000022906	Parp9	ARTD9|AW214463|BC003281|Bagl|Bal|PARP-9	poly (ADP-ribose) polymerase family, member 9	protein-coding
unique_peak2-38679-11-29--1.39819701135691-2.12469164491494	chr7	100492494	100493851	+	0	NA	Intergenic	Lx4B|LINE|L1	264783	NM_021427	58238	Mm.113787	NM_021427		Fam181b	A830059I20Rik|AB041569	family with sequence similarity 181, member B	protein-coding
unique_peak2-32866-13-16--0.30899081061257-0.330004445983672	chr10	4621140	4621777	+	0	NA	Intergenic	RLTR4_MM-int|LTR|ERV1	80382	NM_025995	67141	Mm.197520	NM_025995	ENSMUSG00000019773	Fbxo5	2510044I10Rik|C85305|Emi1|Fbxo31	F-box protein 5	protein-coding
unique_peak2-34926-13-25--0.921967687503323-0.983972868822056	chr15	85677293	85678685	+	0	NA	intron (NM_001033337, intron 8 of 13)	intron (NM_001033337, intron 8 of 13)	-12148	NM_001168672	29870	Mm.20858	NM_013882	ENSMUSG00000022385	Gtse1	B99|Gtse-1	G two S phase expressed protein 1	protein-coding
common_peak1-14253-30-22-0.64611345343486-1.04213512323541	chr2	155236180	155237282	+	0	NA	intron (NM_019825, intron 9 of 13)	intron (NM_019825, intron 9 of 13)	29139	NM_178111	68728	Mm.293605	NM_178111	ENSMUSG00000038375	Trp53inp2	1110029F20Rik|Tp53inp2	transformation related protein 53 inducible nuclear protein 2	protein-coding
common_peak2-22788-11-14--0.398197011356905-0.379391706698377	chr14	7826133	7826656	+	0	NA	Intergenic	L1M2|LINE|L1	33569	NM_001164727	100038847	Mm.443041	NM_001164727	ENSMUSG00000093985	Gm10406	ENSMUSG00000072735	predicted gene 10406	protein-coding
unique_peak2-38388-3-7--1.41398308995928-1.23214870625617	chr7	18840930	18841379	+	0	NA	intron (NM_153749, intron 1 of 4)	RLTR42-int|LTR|ERVK	10458	NM_153749	266815	Mm.106769	NM_153749	ENSMUSG00000054005	Mill1	5530400I18Rik	MHC I like leukocyte 1	protein-coding
common_peak2-20171-9-10--0.269818212233077-1.05503135781948	chr1	171258559	171259078	+	0	NA	Intergenic	Intergenic	202777	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
common_peak1-16836-29-27-0.304935158557507-0.525808162491371	chr6	51378895	51380033	+	0	NA	Intergenic	Intergenic	-3205	NM_010903	18025	Mm.42138	NM_010903	ENSMUSG00000029832	Nfe2l3	Nrf3	nuclear factor, erythroid derived 2, like 3	protein-coding
common_peak1-7542-41-43-0.241717086211363-0.486454540233427	chr1	36368407	36369317	+	0	NA	intron (NM_001290726, intron 2 of 7)	intron (NM_001290726, intron 2 of 7)	4284	NM_001172205	214855	Mm.34316	NM_145996	ENSMUSG00000037447	Arid5a	D430024K22Rik|Mrf1	AT rich interactive domain 5A (MRF1-like)	protein-coding
common_peak2-27407-23-45--0.801794451547932-1.41868709588403	chr3	88490887	88492181	+	0	NA	intron (NM_028814, intron 2 of 13)	B1_Mus1|SINE|Alu	1818	NM_028814	74200	Mm.251800	NM_028814	ENSMUSG00000028060	2810403A07Rik	A430106P18Rik|AI256352|AI451678|Blom7|Kiaa0907	RIKEN cDNA 2810403A07 gene	protein-coding
unique_peak2-39682-5-5--0.289342836727009-0.909929411522249	chr9	108692766	108693193	+	0	NA	Intergenic	PB1D7|SINE|Alu	-5346	NM_029634	76500	Mm.276336	NM_029634	ENSMUSG00000032599	Ip6k2	1500005N04Rik|AW050208|Ihpk2	inositol hexaphosphate kinase 2	protein-coding
unique_peak1-3239-11-5-0.923731083530457-1.477227296591	chr18	63765230	63765788	+	0	NA	Intergenic	Intergenic	86504	NM_016792	53382	Mm.19169	NM_016792	ENSMUSG00000024583	Txnl1	32kDa|TRP32|Txnl	thioredoxin-like 1	protein-coding
unique_peak1-5608-9-3-1.18961340640422-1.57096726280955	chr6	97353322	97353921	+	0	NA	intron (NM_145148, intron 5 of 23)	RSINE1|SINE|B4	-150847	NM_001081157	320502	Mm.68163	NM_001081157	ENSMUSG00000044086	Lmod3	5430424A14Rik	leiomodin 3 (fetal)	protein-coding
common_peak1-18162-8-9--0.316705676939792-1.03275496310833	chr8	13287617	13288132	+	0	NA	promoter-TSS (NM_172282)	promoter-TSS (NM_172282)	-139	NM_172282	234076	Mm.219813	NM_172282	ENSMUSG00000038497	Tmco3	B230339H12Rik|C87304	transmembrane and coiled-coil domains 3	protein-coding
common_peak1-12068-24-19-0.471281807880354-0.677583764578261	chr17	23997563	23998436	+	0	NA	Intergenic	Intergenic	-7040	NM_020487	57256	Mm.386785	NM_020487	ENSMUSG00000024116	Prss21	1700023E12Rik|TESP5|mT4|testisin	protease, serine 21	protein-coding
common_peak1-8344-13-16--0.30899081061257-0.330004445983672	chr10	52233843	52234332	+	0	NA	Intergenic	MTE2b|LTR|MaLR	31458	NR_037920	22639	Mm.490597	NM_009540	ENSMUSG00000049576	Zfa-ps	Zfa|Zfx	zinc finger protein, autosomal, pseudogene	pseudo
unique_peak1-1749-9-0-3.18961340640422-3.01029995663981	chr13	107371768	107372390	+	0	NA	Intergenic	L1Md_F2|LINE|L1	354916	NM_029665	76582	Mm.132208	NM_029665	ENSMUSG00000042590	Ipo11	1700081H05Rik|2510001A17Rik|AI314624|AW555235|E330021B14Rik|Ranbp11	importin 11	protein-coding
common_peak1-13767-27-14-1.08465535528672-1.87214134458703	chr2	35341415	35342605	+	0	NA	Intergenic	Intergenic	-25065	NM_001145821	14594	Mm.281124	NM_010283	ENSMUSG00000035778	Ggta1	AW108479|GALT|Gal|Ggta|Ggta-1|alpha3GalT	glycoprotein galactosyltransferase alpha 1, 3	protein-coding
unique_peak1-3347-24-4-2.47128180788035-4.69785539356838	chr19	15941100	15941980	+	0	NA	Intergenic	Intergenic	57572	NM_001205339	107272	Mm.289936	NM_177420	ENSMUSG00000024640	Psat1	D8Ertd814e|EPIP|PSA|Psat	phosphoserine aminotransferase 1	protein-coding
common_peak2-22732-13-12-0.0780323124966764-0.334470287753051	chr13	108297313	108297765	+	0	NA	Intergenic	Intergenic	37637	NR_045084	105120	Mm.417700	NR_045083		AI197445	-	expressed sequence AI197445	ncRNA
unique_peak2-39678-7-20--1.59322659248057-1.71830443967823	chr9	108567065	108568208	+	0	NA	intron (NM_020520, intron 1 of 8)	MTEa|LTR|MaLR	3207	NM_020520	57279	Mm.29666	NM_020520	ENSMUSG00000032602	Slc25a20	1110007P09Rik|C78826|Cact|mCAC	solute carrier family 25 (mitochondrial carnitine/acylcarnitine translocase), member 20	protein-coding
common_peak1-8881-14-16--0.188246680892695-0.308035960714963	chr11	44518799	44519437	+	0	NA	intron (NM_001290710, intron 6 of 14)	intron (NM_001290710, intron 6 of 14)	87516	NM_001290710	13591	Mm.439662	NM_007897		Ebf1	Ebf|O/E-1|OE-1|Olf-1|Olf1	early B cell factor 1	protein-coding
common_peak2-27395-36-56--0.353568927996987-0.561693437916856	chr3	88137989	88139638	+	0	NA	promoter-TSS (NM_024246)	promoter-TSS (NM_024246)	-458	NM_024246	71913	Mm.34256	NM_024246	ENSMUSG00000001420	Tmem79	2310042N02Rik|2310074C17Rik	transmembrane protein 79	protein-coding
common_peak2-23746-12-12--0.0516637330534535-0.309718203022949	chr15	97786327	97786827	+	0	NA	Intergenic	Intergenic	-8083	NM_201359	380967	Mm.196630	NM_201359	ENSMUSG00000052369	Tmem106c	AI046681|BC046621|D15Ertd405e	transmembrane protein 106C	protein-coding
common_peak2-22894-15-12-0.311725032414564-0.425539671739611	chr14	32165183	32165752	+	0	NA	intron (NM_009796, intron 6 of 20)	intron (NM_009796, intron 6 of 20)	15557	NM_009796	12339	Mm.201535	NM_009796	ENSMUSG00000021893	Capn7	AU022319|PalBH	calpain 7	protein-coding
common_peak2-20449-11-42--1.91757117045048-4.50078841046546	chr10	40300888	40301913	+	0	NA	intron (NM_027572, intron 3 of 7)	intron (NM_027572, intron 3 of 7)	11232	NM_027572	70840	Mm.332570	NM_027572	ENSMUSG00000019834	Slc22a16	4921504E14Rik|CT2|FLIPT2|OCT6|OKB1	solute carrier family 22 (organic cation transporter), member 16	protein-coding
unique_peak2-32613-11-18--0.739233929191972-0.671582559449692	chr1	105663967	105664778	+	0	NA	Intergenic	B3A|SINE|B2	-1001024	NM_011800	23836	Mm.103640	NM_011800	ENSMUSG00000050840	Cdh20	Cdh7	cadherin 20	protein-coding
unique_peak2-33789-3-5--0.998945590680433-0.96108193396963	chr11	119916298	119916681	+	0	NA	Intergenic	MTE2b|LTR|MaLR	-8030	NM_007377	11302	Mm.6826	NM_007377	ENSMUSG00000025375	Aatk	AATYK|aatyk1|mKIAA0641	apoptosis-associated tyrosine kinase	protein-coding
common_peak1-14827-9-8-0.0196884049619079-1.03275496310833	chr3	90603660	90604166	+	0	NA	Intergenic	L1Md_F3|LINE|L1	73085	NM_207263	384997	Mm.316644	NM_207263	ENSMUSG00000042250	Pglyrp4	Gm1478|Gm413	peptidoglycan recognition protein 4	protein-coding
common_peak2-26896-30-36--0.039777956137077-0.301029995663973	chr2	158027902	158029082	+	0	NA	intron (NM_001131021, intron 11 of 15)	intron (NM_001131021, intron 11 of 15)	10748	NR_036606	73399	Mm.416861	NR_036606	ENSMUSG00000078957	1700060C20Rik	-	RIKEN cDNA 1700060C20 gene	ncRNA
common_peak1-8777-12-2-2.06381348436648-2.79529063155376	chr11	8482762	8483402	+	0	NA	intron (NM_001083587, intron 3 of 30)	intron (NM_001083587, intron 3 of 30)	81456	NM_001083587	319939	Mm.337820	NM_001083587	ENSMUSG00000020422	Tns3	BC023928|F830010I22Rik|TEM6|Tens1	tensin 3	protein-coding
common_peak1-16166-32-40--0.0784599853984238-0.303778768325576	chr5	88553491	88555117	+	0	NA	Intergenic	Intergenic	38723	NM_001252680	20600	Mm.1397	NM_021289	ENSMUSG00000029281	Smr2	MSG2|Vcs2	submaxillary gland androgen regulated protein 2	protein-coding
unique_peak1-3875-10-6-0.549060422951165-1.21398586181642	chr2	13271591	13272050	+	0	NA	intron (NM_001081084, intron 37 of 66)	intron (NM_001081084, intron 37 of 66)	-78778	NM_009105	20163	Mm.905	NM_009105	ENSMUSG00000026727	Rsu1	RsuI|rsp-1	Ras suppressor protein 1	protein-coding
common_peak2-29623-24-12-1.09277018462662-1.73042999925837	chr6	54363769	54364401	+	0	NA	intron (NR_033635, intron 1 of 13)	intron (NR_033635, intron 1 of 13)	16130	NR_033635	100042056	Mm.448157	NM_198118	ENSMUSG00000073067	9130019P16Rik	6430501H15Rik|OTTMUSG00000023151	RIKEN cDNA 9130019P16 gene	ncRNA
unique_peak1-6656-24-5-2.20824740204656-4.1393347358673	chr8	14967299	14968591	+	0	NA	intron (NM_172751, intron 18 of 28)	intron (NM_172751, intron 18 of 28)	-43080	NM_029116	74901	Mm.46675	NM_029116	ENSMUSG00000055675	Kbtbd11	2900016B01Rik|4930465M17Rik|mKIAA0711	kelch repeat and BTB (POZ) domain containing 11	protein-coding
common_peak2-29440-34-43--0.0773630916360313-0.30358472802154	chr6	17064827	17066091	+	0	NA	Intergenic	(CAGA)n|Simple_repeat|Simple_repeat	50310	NM_207176	21753	Mm.436548	NM_011570	ENSMUSG00000029552	Tes	D6Ertd352e|TESS|Tes1|Tes2|testin2	testis derived transcript	protein-coding
unique_peak2-37509-10-9-0.0344872501214071-1.05503135781948	chr5	17353747	17354426	+	0	NA	intron (NM_001159558, intron 1 of 15)	intron (NM_001159558, intron 1 of 15)	1524	NM_001159556	12491	Mm.18628	NM_007643	ENSMUSG00000002944	Cd36	FAT|GPIV|Scarb3	CD36 antigen	protein-coding
common_peak2-21389-24-30--0.160986407619158-0.316008636696545	chr11	79993127	79994248	+	0	NA	Intergenic	L1MC4|LINE|L1	-3687	NM_028019	71956	Mm.22985	NM_028019	ENSMUSG00000020707	Rnf135	0610037N03Rik|2410006N06Rik	ring finger protein 135	protein-coding
common_peak1-13630-8-13--0.802132504110034-0.562038191119711	chr2	25286271	25286821	+	0	NA	intron (NM_007379, intron 1 of 47)	intron (NM_007379, intron 1 of 47)	2352	NM_007379	11305	Mm.2210	NM_007379	ENSMUSG00000026944	Abca2	AI413825|Abc2|D2H0S1474E|mKIAA1062	ATP-binding cassette, sub-family A (ABC1), member 2	protein-coding
common_peak2-29590-10-14--0.550475250599749-0.446472590016315	chr6	50395024	50395617	+	0	NA	intron (NM_001163645, intron 1 of 21)	MTEa|LTR|MaLR	10849	NM_001163645	71720	Mm.44153	NM_027881	ENSMUSG00000029822	Osbpl3	1200014M06Rik|6720421I08Rik|A530055M08|ORP3|OSBP3	oxysterol binding protein-like 3	protein-coding
common_peak1-10414-12-16--0.4386868561627-0.368541233333383	chr13	98504749	98505274	+	0	NA	Intergenic	MER5A|DNA|MER1_type	175056	NR_046157	328314	Mm.138047	NR_046157		Gm5086	B230311A21|EG328314	predicted gene 5086	ncRNA
unique_peak1-2924-6-1-1.5653981103803-1.56314192529759	chr17	50389267	50389763	+	0	NA	Intergenic	IAPEy-int|LTR|ERVK	43430	NM_010021	13164	Mm.280641	NM_010021	ENSMUSG00000010592	Dazl	Daz-like|Dazh|Dazl1|Dazla|Tpx-2|Tpx2	deleted in azoospermia-like	protein-coding
unique_peak2-39379-7-19--1.52283726458917-1.55050753388976	chr9	21091648	21092075	+	0	NA	intron (NM_145416, intron 2 of 18)	intron (NM_145416, intron 2 of 18)	552	NM_145416	215194	Mm.290690	NM_145416	ENSMUSG00000035047	Kri1	-	KRI1 homolog (S. cerevisiae)	protein-coding
unique_peak1-5666-13-3-1.77847203063777-2.58603100924543	chr6	31073563	31074218	+	0	NA	intron (NR_110471, intron 3 of 3)	intron (NR_110471, intron 3 of 3)	-60797	NR_029532	387223		NR_029532	miRBase:MI0000143	Mir29b-1	Mirn29b|Mirn29b-1	microRNA 29b-1	ncRNA
unique_peak1-1232-20-5-1.90311228387004-2.81016724606745	chr11	113008863	113009814	+	0	NA	intron (NR_015556, intron 1 of 2)	intron (NR_015556, intron 1 of 2)	53814	NR_015556	72386	Mm.266961	NR_015556	ENSMUSG00000087259	2610035D17Rik	-	RIKEN cDNA 2610035D17 gene	ncRNA
unique_peak1-2673-9-6-0.382258484346616-1.11707584880836	chr16	57527981	57528469	+	0	NA	intron (NM_001040397, intron 4 of 4)	ID4|SINE|ID	-21130	NM_001177871	78749	Mm.328360	NM_001040397	ENSMUSG00000043336	Filip1l	4631422O05Rik|Doc1	filamin A interacting protein 1-like	protein-coding
unique_peak1-2845-8-5-0.420259917226415-1.10484139239135	chr17	29274019	29274530	+	0	NA	intron (NM_001002786, intron 1 of 7)	intron (NM_001002786, intron 1 of 7)	2273	NM_001002786	442827	Mm.440341	NM_001002786	ENSMUSG00000064147	Rab44	9830134C10Rik	RAB44, member RAS oncogene family	protein-coding
common_peak2-28862-13-19--0.543456064249594-0.466170754204149	chr5	74194514	74195192	+	0	NA	Intergenic	RMER1A|Other|Other	152234	NM_178387	73472	Mm.87067	NM_178387	ENSMUSG00000029155	Spata18	1700067I02Rik	spermatogenesis associated 18	protein-coding
unique_peak2-35864-2-7--1.91745425626332-1.45399745587252	chr18	76335564	76336058	+	0	NA	Intergenic	Intergenic	5605	NR_105776	102465184		NR_105776	miRBase:MI0021886	Mir6358	mmu-mir-6358	microRNA mir-6358	ncRNA
common_peak2-22713-41-48-0.0864388607334519-0.335782825099843	chr13	102898234	102899560	+	0	NA	Intergenic	Intergenic	-360725	NM_001077495	18708	Mm.259333	NM_001024955	ENSMUSG00000041417	Pik3r1	PI3K|p50alpha|p55alpha|p85alpha	phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 1 (p85 alpha)	protein-coding
common_peak1-14251-46-36-0.688542577619851-1.61783625824857	chr2	154891893	154892946	+	0	NA	intron (NM_016661, intron 3 of 9)	B3|SINE|B2	7814	NM_016661	269378	Mm.330692	NM_016661	ENSMUSG00000027597	Ahcy	AA987153|AL024110|CuBP|SAHH	S-adenosylhomocysteine hydrolase	protein-coding
common_peak1-9398-139-135-0.72075352626586-5.14250625309503	chr11	100286603	100290394	+	0	NA	intron (NM_026561, intron 8 of 8)	intron (NM_026561, intron 8 of 8)	11490	NM_001163481	14230	Mm.3894	NM_010221	ENSMUSG00000001555	Fkbp10	AI325255|FKBP-10|FKBP-65|FKBP65|Fkbp-rs1|Fkbp1-rs|Fkbp6|Fkbprp	FK506 binding protein 10	protein-coding
common_peak2-22906-21-15-0.569489265266236-0.756118839439552	chr14	34548992	34549618	+	0	NA	Intergenic	Charlie22a|DNA|MER1_type	146849	NM_008978	19256	Mm.8019	NM_008978	ENSMUSG00000021940	Ptpn20	typ	protein tyrosine phosphatase, non-receptor type 20	protein-coding
common_peak1-10945-21-19-0.247561170378873-0.427564438475253	chr15	25397237	25398019	+	0	NA	Intergenic	Intergenic	53681	NR_027376	432939	Mm.146555	NM_001013791		Gm5468	100040583|EG432939	predicted gene 5468	ncRNA
common_peak2-30415-17-30--0.735899972181837-0.841847921495509	chr7	38270606	38271637	+	0	NA	intron (NM_172385, intron 5 of 5)	PB1D10|SINE|Alu	283650	NM_172385	243937	Mm.322505	NM_172385	ENSMUSG00000043456	Zfp536	9630010P11Rik|Znf536|mKIAA0390	zinc finger protein 536	protein-coding
unique_peak1-2338-7-2-1.21412832957703-1.45399745587252	chr15	84695857	84696404	+	0	NA	Intergenic	B2_Mm1a|SINE|B2	-9571	NR_030731	271305	Mm.101022	NM_001081166	ENSMUSG00000016624	Phf21b	A730032D07Rik	PHD finger protein 21B	protein-coding
unique_peak1-1016-21-3-2.56948926526624-4.33845181153635	chr11	74571361	74572247	+	0	NA	Intergenic	(GGGAGA)n|Simple_repeat|Simple_repeat	-12561	NM_026197	67493	Mm.45748	NM_026197		Mettl16	2610100D03Rik|2810013M15Rik|A830095F14Rik|AI846133|Mett10d	methyltransferase like 16	protein-coding
common_peak2-26978-13-19--0.543456064249594-0.466170754204149	chr2	167503296	167503948	+	0	NA	Intergenic	HAL1-3A_ME|LINE|L1	-10793	NM_009883	12608	Mm.439656	NM_009883	ENSMUSG00000056501	Cebpb	C/EBPbeta|CRP2|IL-6DBP|LAP|LIP|NF-IL6|NF-M|Nfil6	CCAAT/enhancer binding protein (C/EBP), beta	protein-coding
unique_peak2-39531-7-10--0.660340788339108-1.12966497611638	chr9	66794998	66795554	+	0	NA	intron (NM_026467, intron 2 of 3)	intron (NM_026467, intron 2 of 3)	1351	NM_026467	67941	Mm.30120	NM_026467	ENSMUSG00000036781	Rps27l	1810034D23Rik	ribosomal protein S27-like	protein-coding
common_peak2-23400-15-19--0.309763344331706-0.356936432242222	chr15	59080943	59081793	+	0	NA	Intergenic	Intergenic	-57135	NR_045613	100416830	Mm.490788	NR_045613	ENSMUSG00000098528	Zfp572	4930472F24Rik	zinc finger protein 572	pseudo
unique_peak2-33286-7-15--1.20090916970181-0.947446088118041	chr11	60931947	60932557	+	0	NA	Intergenic	MTC-int|LTR|MaLR	-22085	NM_021349	57916	Mm.265915	NM_021349	ENSMUSG00000010142	Tnfrsf13b	1200009E08Rik|Taci	tumor necrosis factor receptor superfamily, member 13b	protein-coding
common_peak2-27267-39-40-0.25820924230107-0.498996592876743	chr3	57289027	57289904	+	0	NA	intron (NM_133784, intron 3 of 6)	intron (NM_133784, intron 3 of 6)	60133	NM_145539	229302	Mm.26618	NM_145539	ENSMUSG00000027801	Tm4sf4	Iltmp	transmembrane 4 superfamily member 4	protein-coding
unique_peak2-36483-0-5--3.42509343119537-1.32905871926422	chr2	151535179	151535514	+	0	NA	Intergenic	Intergenic	7602	NM_001160363	108832	Mm.103494	NM_001160363	ENSMUSG00000044364	Tmem74b	5430405G05Rik	transmembrane protein 74B	protein-coding
common_peak1-19242-14-18--0.348711353085941-0.360333814299795	chr9	108783696	108784348	+	0	NA	intron (NM_134420, intron 18 of 19)	intron (NM_134420, intron 18 of 19)	27648	NM_134420	171429	Mm.45201	NM_134420		Slc26a6	B930010B04Rik|CFEX|Pat-1|Pat1	solute carrier family 26, member 6	protein-coding
unique_peak1-577-7-1-1.79909083029819-1.80617997398389	chr10	4123445	4123921	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-300458	NM_001161822	56533	Mm.44606	NM_019958	ENSMUSG00000019775	Rgs17	6430507P11Rik|Rgsz2	regulator of G-protein signaling 17	protein-coding
common_peak2-20099-21-32--0.474904854092218-0.550049347815239	chr1	157411693	157412584	+	0	NA	intron (NM_026683, intron 2 of 3)	intron (NM_026683, intron 2 of 3)	6888	NM_026683	72482	Mm.288249	NM_026683	ENSMUSG00000033701	Acbd6	0610010G04Rik|2610100E10Rik	acyl-Coenzyme A binding domain containing 6	protein-coding
unique_peak2-36371-11-5-0.923731083530457-1.477227296591	chr2	113622597	113623010	+	0	NA	intron (NM_009162, intron 4 of 5)	L1MC4|LINE|L1	-23998	NM_011824	23892	Mm.166318	NM_011824		Grem1	Cktsf1b1|Drm|Grem|ld	gremlin 1	protein-coding
unique_peak1-5656-10-5-0.771452844287613-1.33892459842472	chr6	30301394	30302021	+	0	NA	Intergenic	RMER30|DNA|MER1_type	39303	NM_172735	232679	Mm.29780	NM_172735	ENSMUSG00000039130	Zc3hc1	1110054L24Rik|AU018540|AU019789|HSPC216|Nipa	zinc finger, C3HC type 1	protein-coding
common_peak2-20885-19-32--0.641706792696767-0.800403172662453	chr11	3289191	3290266	+	0	NA	intron (NM_010718, intron 2 of 15)	GA-rich|Low_complexity|Low_complexity	-18333	NM_173053	16886	Mm.124176	NM_010718	ENSMUSG00000020451	Limk2	Limk-2	LIM motif-containing protein kinase 2	protein-coding
common_peak1-16596-36-48--0.135388757947454-0.322047890816902	chr5	149183405	149184397	+	0	NA	intron (NM_007513, intron 1 of 12)	intron (NM_007513, intron 1 of 12)	27579	NM_007513	11987	Mm.275489	NM_007513	ENSMUSG00000041313	Slc7a1	4831426K01Rik|AI447493|Atrc-1|Atrc1|Cat1|Rec-1|Rev-1|mCAT-1	solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	protein-coding
common_peak2-31450-8-8--0.164702583494742-1.00793137938329	chr8	104641883	104642345	+	0	NA	Intergenic	Intergenic	666897	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
common_peak1-14626-8-30--1.9489738924393-3.2467506969819	chr3	54692888	54693221	+	0	NA	Intergenic	Intergenic	26755	NM_177854	329641	Mm.51187	NM_177854	ENSMUSG00000056306	Sertm1	6030405A18Rik	serine rich and transmembrane domain containing 1	protein-coding
common_peak1-16177-24-14-0.886319307159198-1.33403699391683	chr5	91072825	91074010	+	0	NA	Intergenic	Intergenic	-3904	NM_028478	73246	Mm.30172	NM_028478	ENSMUSG00000029370	Rassf6	1600016B17Rik	Ras association (RalGDS/AF-6) domain family member 6	protein-coding
unique_peak2-38800-6-9--0.75652998450706-1.11707584880836	chr7	131362959	131363429	+	0	NA	intron (NM_001252072, intron 1 of 1)	intron (NM_001252072, intron 1 of 1)	236499	NM_001252072	628779	Mm.40210	NM_001252072	ENSMUSG00000078591	Hs3st4	EG628779|Gm6915	heparan sulfate (glucosamine) 3-O-sulfotransferase 4	protein-coding
common_peak2-20792-11-17--0.661231417190699-0.58239619684445	chr10	121801876	121802510	+	0	NA	Intergenic	L1Md_A|LINE|L1	-83362	NM_016847	54140	Mm.4351	NM_016847	ENSMUSG00000020123	Avpr1a	AVPR|Avpr1|V1a|V1aR	arginine vasopressin receptor 1A	protein-coding
common_peak1-8568-13-20--0.613845392140992-0.532159081577619	chr10	95643858	95644623	+	0	NA	Intergenic	L2c|LINE|L2	-44601	NR_110448	74881	Mm.410819	NR_110448		4930459C07Rik	-	RIKEN cDNA 4930459C07 gene	ncRNA
common_peak2-26965-22-25--0.0531556130536872-0.301029995663976	chr2	166793282	166794398	+	0	NA	intron (NM_011490, intron 1 of 11)	(GGGAGA)n|Simple_repeat|Simple_repeat	-3623	NR_111895	20853	Mm.73276	NM_011490	ENSMUSG00000039536	Stau1	5830401L18Rik|AW549911|C85792|Stau	staufen (RNA binding protein) homolog 1 (Drosophila)	protein-coding
common_peak1-9741-22-42--0.778980649614693-1.24799833770813	chr12	49382685	49383787	+	0	NA	Intergenic	L1_Mur2|LINE|L1	-1100634	NM_001160112	15228	Mm.4704	NM_008241	ENSMUSG00000020950	Foxg1	2900064B05Rik|BF-1|Bf1|Hfh9|Hfhbf1	forkhead box G1	protein-coding
common_peak2-25913-10-11--0.228547155712387-0.31137425193576	chr19	46348513	46348959	+	0	NA	intron (NM_178930, intron 29 of 39)	ID_B1|SINE|B4	-30491	NM_001177369	18034	Mm.102365	NM_019408	ENSMUSG00000025225	Nfkb2	NF-kappaB2|lyt|p49|p49/p100|p50B|p52	nuclear factor of kappa light polypeptide gene enhancer in B cells 2, p49/p100	protein-coding
common_peak1-16638-28-17-0.88303411837915-1.43262124146305	chr6	66535283	66536434	+	0	NA	Intergenic	L1Md_F3|LINE|L1	-26156	NM_134170	171188	Mm.222748	NM_134170	ENSMUSG00000062905	Vmn1r32	V1rc15	vomeronasal 1 receptor 32	protein-coding
common_peak1-14404-100-44-1.74491867848112-13.7825667411101	chr2	173728664	173732412	+	0	NA	Intergenic	Lx2|LINE|L1	167466	NM_019806	56491	Mm.260456	NM_019806	ENSMUSG00000054455	Vapb	AI225786|AI840687|AI848259|D2Abb2e|R75548|VAP33b|Vamp33b	vesicle-associated membrane protein, associated protein B and C	protein-coding
common_peak2-25101-4-6--0.830815435910851-0.989110657569874	chr18	36678308	36678613	+	0	NA	Intergenic	Intergenic	-3001	NM_010415	15200	Mm.289681	NM_010415	ENSMUSG00000024486	Hbegf	AW047313|Dtr|Dts|Hegfl	heparin-binding EGF-like growth factor	protein-coding
common_peak1-10891-19-24--0.241168863113038-0.344491671143527	chr15	88751447	88752368	+	0	NA	intron (NM_172818, intron 8 of 11)	intron (NM_172818, intron 8 of 11)	32941	NM_172818	239591	Mm.86807	NM_172818	ENSMUSG00000022388	Ttll8	1700019P01Rik|4933401B17	tubulin tyrosine ligase-like family, member 8	protein-coding
common_peak2-23997-18-20--0.0793982715504091-0.301029995663976	chr16	20301844	20302490	+	0	NA	intron (NM_001005767, intron 1 of 9)	CpG	268	NM_001005767	381038	Mm.371737	NM_001005767	ENSMUSG00000033918	Parl	D16Ertd607e|PRO2207|PSARL1|PSENIP2|Psarl	presenilin associated, rhomboid-like	protein-coding
common_peak1-11910-31-82--1.1498007605338-4.08971075991014	chr17	27622642	27623753	+	0	NA	intron (NM_001291045, intron 1 of 9)	intron (NM_001291045, intron 1 of 9)	17281	NM_001013385	268934	Mm.358940	NM_001013385	ENSMUSG00000063239	Grm4	Gprc1d|mGluR4	glutamate receptor, metabotropic 4	protein-coding
common_peak2-21850-52-68--0.00026446651247003-0.302615026096394	chr11	121353781	121354650	+	0	NA	intron (NM_029878, intron 8 of 38)	intron (NM_029878, intron 8 of 38)	26441	NM_178763	319530	Mm.11395	NM_178763	ENSMUSG00000039238	Zfp750	A030007D23Rik|Znf750	zinc finger protein 750	protein-coding
common_peak2-21973-142-235--0.0373207887912219-0.312704803491214	chr12	49383885	49386410	+	0	NA	Intergenic	Intergenic	-1098723	NM_001160112	15228	Mm.4704	NM_008241	ENSMUSG00000020950	Foxg1	2900064B05Rik|BF-1|Bf1|Hfh9|Hfhbf1	forkhead box G1	protein-coding
unique_peak2-32577-4-8--1.19338551529556-1.21878474469819	chr1	87509535	87509997	+	0	NA	intron (NM_001013817, intron 3 of 16)	intron (NM_001013817, intron 3 of 16)	-9300	NM_175397	109032	Mm.335802	NM_030194	ENSMUSG00000070034	Sp110	5031415C07Rik|52kDa|5830484A20Rik|ENSMUSG00000075603|Ifi75|Ipr1	Sp110 nuclear body protein	protein-coding
unique_peak1-2333-17-3-2.21829633820504-3.11807310444576	chr15	83570906	83571599	+	0	NA	Intergenic	Intergenic	-15783	NM_022723	64706	Mm.40393	NM_022723	ENSMUSG00000016763	Scube1	7330410C13Rik|A630023E24Rik	signal peptide, CUB domain, EGF-like 1	protein-coding
common_peak1-15183-12-11-0.0638134843664826-0.337263207250336	chr3	152522114	152522659	+	0	NA	intron (NM_012028, intron 2 of 4)	GA-rich|Low_complexity|Low_complexity	122785	NM_012028	26938	Mm.40915	NM_012028		St6galnac5	AI851940|Siat7e	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	protein-coding
unique_peak1-6680-11-6-0.701338662194009-1.32595962126035	chr8	25009807	25010347	+	0	NA	intron (NM_001277239, intron 4 of 7)	Lx9|LINE|L1	229944	NM_177086	320158	Mm.121274	NM_177086	ENSMUSG00000037492	Zmat4	9630048M01Rik	zinc finger, matrin type 4	protein-coding
common_peak1-18181-21-11-0.984526764545079-1.3750876294627	chr8	15027364	15028098	+	0	NA	exon (NM_029116, exon 2 of 2)	exon (NM_029116, exon 2 of 2)	16706	NM_029116	74901	Mm.46675	NM_029116	ENSMUSG00000055675	Kbtbd11	2900016B01Rik|4930465M17Rik|mKIAA0711	kelch repeat and BTB (POZ) domain containing 11	protein-coding
unique_peak2-33264-5-21--2.16381195464315-2.59995804677862	chr10	128547083	128547875	+	0	NA	Intergenic	RLTR40|LTR|ERVK	2000	NM_146267	257667	Mm.377271	NM_146267	ENSMUSG00000042801	Olfr769	MOR114-14	olfactory receptor 769	protein-coding
unique_peak1-7139-10-1-2.35641534500877-2.57096726280955	chr9	56453421	56453990	+	0	NA	Intergenic	Intergenic	79355	NM_181074	235402	Mm.246605	NM_181074	ENSMUSG00000049556	Lingo1	4930471K13Rik|AV148400|LERN1|LINGO-1|Lrrn6a|UNQ201	leucine rich repeat and Ig domain containing 1	protein-coding
common_peak1-9439-10-18--0.891512168434816-0.804350088532826	chr11	102407131	102407555	+	0	NA	intron (NM_001159492, intron 1 of 7)	intron (NM_001159492, intron 1 of 7)	10129	NM_001159492	237943	Mm.260282	NM_001159492	ENSMUSG00000034621	Gpatch8	5430405G24Rik|AU018890|ENSMUSG00000075516|Fbm1|Gpatc8|mKIAA0553	G patch domain containing 8	protein-coding
common_peak2-23154-28-32-0.00856500046300912-0.30437085424443	chr14	120477575	120478372	+	0	NA	Intergenic	Intergenic	-36316	NM_001001490	239283	Mm.138520	NM_001001490	ENSMUSG00000044819	Oxgr1	Cysltr3|Gm299|Gpr80|Gpr99|P2Y15	oxoglutarate (alpha-ketoglutarate) receptor 1	protein-coding
unique_peak2-38052-5-7--0.704380336005853-1.01466476204226	chr6	42373649	42374094	+	0	NA	Intergenic	Intergenic	-10663	NM_207028	387353	Mm.377914	NM_207028	ENSMUSG00000048284	Tas2r126	T2R12|T2R26|Tas2r26|Tas2r41|mGR26|mt2r35	taste receptor, type 2, member 126	protein-coding
unique_peak2-33911-0-7--3.84013093047421-1.80617997398389	chr12	65075696	65076182	+	0	NA	Intergenic	L1_Mur2|LINE|L1	499946	NM_001163271	623046	Mm.189552	NM_001163271	ENSMUSG00000043060	Fscb	EG623046	fibrous sheath CABYR binding protein	protein-coding
common_peak1-7567-63-35-1.26838758962828-5.27134665442986	chr1	43167891	43170171	+	0	NA	intron (NM_133818, intron 3 of 3)	intron (NM_133818, intron 3 of 3)	13476	NM_133818	98404	Mm.28817	NM_133818	ENSMUSG00000010290	AI597479	-	expressed sequence AI597479	protein-coding
common_peak2-26632-23-25-0.0213277863679888-0.30528805757448	chr2	119207952	119209011	+	0	NA	intron (NM_026574, intron 31 of 35)	(CA)n|Simple_repeat|Simple_repeat	31503	NM_026929	69065	Mm.35083	NM_026929	ENSMUSG00000027313	Chac1	1810008K03Rik	ChaC, cation transport regulator 1	protein-coding
common_peak2-27567-16-18--0.129663871175524-0.307235046933848	chr3	98056342	98057114	+	0	NA	Intergenic	Intergenic	-27626	NM_008256	15360	Mm.289131	NM_008256	ENSMUSG00000027875	Hmgcs2	1300002P16|mHS	3-hydroxy-3-methylglutaryl-Coenzyme A synthase 2	protein-coding
unique_peak2-33884-3-7--1.41398308995928-1.23214870625617	chr12	33202589	33203023	+	0	NA	Intergenic	Intergenic	139152	NM_001162903	72123	Mm.341352	NM_028111	ENSMUSG00000090946	Ccdc71l	2010109K11Rik|AV375874	coiled-coil domain containing 71 like	protein-coding
unique_peak1-1385-15-5-1.4272022498345-1.61682445937017	chr12	56519680	56520420	+	0	NA	TTS (NM_011968)	TTS (NM_011968)	20238	NM_011968	26443	Mm.30210	NM_011968	ENSMUSG00000021024	Psma6	IOTA	proteasome (prosome, macropain) subunit, alpha type 6	protein-coding
common_peak1-12859-11-12--0.191746133889479-0.310474156842889	chr18	75404870	75405484	+	0	NA	intron (NM_027727, intron 16 of 16)	intron (NM_027727, intron 16 of 16)	51794	NR_045394	100503117	Mm.250517	NR_045393		2010010A06Rik	5033420E22Rik	RIKEN cDNA 2010010A06 gene	ncRNA
common_peak1-14882-92-78-0.788571335525662-3.75757211923619	chr3	95950352	95952151	+	0	NA	intron (NM_001025613, intron 7 of 12)	intron (NM_001025613, intron 7 of 12)	-14642	NM_181409	194126	Mm.268536	NM_181409	ENSMUSG00000045934	Mtmr11	AI035306|BC051083|Cra	myotubularin related protein 11	protein-coding
common_peak2-31023-28-54--0.728400593703197-1.41268768702114	chr8	11635072	11636551	+	0	NA	promoter-TSS (NM_001167967)	promoter-TSS (NM_001167967)	-54	NM_001281974	102334	Mm.12459	NM_133971	ENSMUSG00000031508	Ankrd10	4833425P12Rik|AW549277	ankyrin repeat domain 10	protein-coding
unique_peak2-37327-5-9--1.02630843089322-1.21398586181642	chr4	129623472	129624081	+	0	NA	Intergenic	Intergenic	-13842	NR_040647	72225	Mm.102193	NR_040647		1700003M07Rik	-	RIKEN cDNA 1700003M07 gene	ncRNA
unique_peak1-1043-10-6-0.549060422951165-1.21398586181642	chr11	77685314	77685943	+	0	NA	Intergenic	Intergenic	21746	NM_008952	19193	Mm.8543	NM_008952	ENSMUSG00000017453	Pipox	LPIPOX|Pso	pipecolic acid oxidase	protein-coding
common_peak2-30207-52-50-0.435834648294204-0.962598551638154	chr7	89980491	89981415	+	0	NA	Intergenic	Intergenic	-34890	NM_175366	108797	Mm.306789	NM_175366	ENSMUSG00000057706	Mex3b	4931439A04Rik|M-04814|Rkhd3|mKIAA2009	mex3 homolog B (C. elegans)	protein-coding
common_peak1-12567-43-67--0.304899655726636-0.557749827489198	chr18	10609062	10610679	+	0	NA	intron (NM_001081222, intron 1 of 10)	CpG	480	NM_001081222	77805	Mm.210996	NM_144542	ENSMUSG00000024293	Esco1	A930014I12Rik	establishment of cohesion 1 homolog 1 (S. cerevisiae)	protein-coding
unique_peak2-38499-5-19--2.02630843089322-2.19184853030482	chr7	38205469	38206431	+	0	NA	Intergenic	Intergenic	348821	NM_172385	243937	Mm.322505	NM_172385	ENSMUSG00000043456	Zfp536	9630010P11Rik|Znf536|mKIAA0390	zinc finger protein 536	protein-coding
common_peak2-20988-10-7-0.356415345008769-1.12966497611638	chr11	22719121	22719572	+	0	NA	Intergenic	Intergenic	40389	NM_016888	53625	Mm.395495	NM_016888	ENSMUSG00000051650	B3gnt2	AA408337|AA409404|AW260308|B3Galt6|B3gnt1|BGnT-1|BGnT-2|BGnT1|BGnT2|Beta3gnt	UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2	protein-coding
common_peak1-9892-9-7-0.18961340640422-1.05908390183068	chr12	85485525	85486094	+	0	NA	Intergenic	RSINE1|SINE|B4	3630	NM_027438	70481	Mm.444348	NM_027438	ENSMUSG00000054383	Pnma1	5730402C15Rik	paraneoplastic antigen MA1	protein-coding
unique_peak1-6122-13-5-1.19350952991661-1.95509489018123	chr6	129214160	129214897	+	0	NA	Intergenic	RMER3D-int|LTR|ERVK	10859	NM_001033122	12515	Mm.74745	NM_001033122	ENSMUSG00000030156	Cd69	5830438K24Rik|AI452015|AIM|VEA	CD69 antigen	protein-coding
common_peak1-9726-17-26--0.53659116395843-0.538442145997695	chr12	33147540	33148332	+	0	NA	Intergenic	L1_Mm|LINE|L1	84282	NM_001162903	72123	Mm.341352	NM_028111	ENSMUSG00000090946	Ccdc71l	2010109K11Rik|AV375874	coiled-coil domain containing 71 like	protein-coding
common_peak1-13053-43-19-1.46063509063634-4.27036875499349	chr19	5940402	5941890	+	0	NA	TTS (NM_001164057)	TTS (NM_001164057)	-16330	NM_026772	104252	Mm.491103	NM_026772	ENSMUSG00000045664	Cdc42ep2	1110008C05Rik|Borg1|Cep2|D19Bwg1013e	CDC42 effector protein (Rho GTPase binding) 2	protein-coding
common_peak1-14322-17-11-0.633333837483882-0.769930178837768	chr2	163575236	163575907	+	0	NA	intron (NM_001272052, intron 1 of 11)	CpG	404	NM_007398	11486	Mm.388	NM_007398	ENSMUSG00000017697	Ada	-	adenosine deaminase	protein-coding
common_peak2-22968-14-11-0.314253659636488-0.435191258261915	chr14	54573101	54573580	+	0	NA	Intergenic	L1Md_T|LINE|L1	287725	NM_001205242	100568452	Mm.213248	NM_001205242		A430107P09Rik	Va10	RIKEN cDNA A430107P09 gene	protein-coding
common_peak2-31296-9-7-0.18961340640422-1.05908390183068	chr8	73135934	73136295	+	0	NA	Intergenic	Intergenic	-3901	NM_133772	76900	Mm.6667	NM_133772	ENSMUSG00000070003	Ssbp4	1210002E11Rik|AW743380|Sspb4	single stranded DNA binding protein 4	protein-coding
unique_peak2-35022-5-7--0.704380336005853-1.01466476204226	chr15	102350378	102350794	+	0	NA	intron (NM_009319, intron 2 of 8)	MTD|LTR|MaLR	1963	NM_009319	21357	Mm.291485	NM_009319	ENSMUSG00000023051	Tarbp2	Prbp|TRBP	TAR (HIV) RNA binding protein 2	protein-coding
unique_peak1-5403-9-6-0.382258484346616-1.11707584880836	chr5	105585973	105586414	+	0	NA	Intergenic	Intergenic	-17588	NM_001256005	17472	Mm.440525	NM_008620	ENSMUSG00000079363	Gbp4	AW228052|Mag-2|Mpa-2|Mpa2|mKIAA4245	guanylate binding protein 4	protein-coding
common_peak2-22791-14-13-0.0918612383000403-0.332077462497413	chr14	7900067	7900788	+	0	NA	Intergenic	Intergenic	37544	NM_001024712	100042149	Mm.396155	NM_001024712	ENSMUSG00000092167	Gm3696	544988|ENSMUSG00000056940|Gm10014	predicted gene 3696	protein-coding
unique_peak2-38285-9-8-0.0196884049619079-1.03275496310833	chr6	134414496	134414969	+	0	NA	intron (NM_008514, intron 15 of 22)	intron (NM_008514, intron 15 of 22)	68385	NM_025778	66813	Mm.474472	NM_025778	ENSMUSG00000030200	Bcl2l14	4930452K23Rik|4933405K19Rik|9030625M01Rik|AI429211|Bclg	BCL2-like 14 (apoptosis facilitator)	protein-coding
unique_peak2-38227-5-6--0.511735258063458-0.947717972411649	chr6	115491489	115491834	+	0	NA	Intergenic	Intergenic	-3061	NM_199033	381802	Mm.291208	NM_199033	ENSMUSG00000042389	Tsen2	AU067695	tRNA splicing endonuclease 2 homolog (S. cerevisiae)	protein-coding
common_peak2-22707-10-18--0.891512168434816-0.804350088532826	chr13	101428869	101429427	+	0	NA	intron (NM_027592, intron 2 of 4)	intron (NM_027592, intron 2 of 4)	7586	NM_001015889	108143	Mm.301148	NM_027139	ENSMUSG00000052293	Taf9	2310012M09Rik|AA673500|AU045423|TAFII31|TAFII32|Taf2g	TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor	protein-coding
common_peak2-29819-19-6-1.59533240460408-2.21753093801298	chr6	91489538	91489962	+	0	NA	Intergenic	L1M4|LINE|L1	23721	NM_026309	67678	Mm.246693	NM_026309	ENSMUSG00000034192	Lsm3	1010001J12Rik|2610005D18Rik|6030401D18Rik|SMX4|USS2	LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)	protein-coding
unique_peak2-32461-6-20--1.82691931239846-2.0280102512677	chr1	16105692	16106296	+	0	NA	intron (NM_133832, intron 2 of 5)	intron (NM_133832, intron 2 of 5)	10031	NM_133832	98711	Mm.274376	NM_133832		Rdh10	3110069K09Rik|4921506A21Rik|AI875664|AW549993|D1Ertd762e|m366Asp	retinol dehydrogenase 10 (all-trans)	protein-coding
unique_peak1-3277-13-1-2.77847203063777-3.64038867156802	chr18	73834719	73835114	+	0	NA	intron (NM_008540, intron 3 of 11)	intron (NM_008540, intron 3 of 11)	28479	NM_008540	17128	Mm.100399	NM_008540	ENSMUSG00000024515	Smad4	AW743858|D18Wsu70e|DPC4|Madh4	SMAD family member 4	protein-coding
common_peak2-26004-30-22-0.64611345343486-1.04213512323541	chr19	55732377	55733219	+	0	NA	intron (NR_045318, intron 2 of 3)	intron (NR_045318, intron 2 of 3)	43896	NR_045318	77594	Mm.329924	NR_045318	ENSMUSG00000097632	4930552P12Rik	-	RIKEN cDNA 4930552P12 gene	ncRNA
unique_peak2-39327-4-9--1.34538860874061-1.36011389749466	chr8	126764341	126764784	+	0	NA	intron (NM_139272, intron 1 of 15)	intron (NM_139272, intron 1 of 15)	9268	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
unique_peak2-32489-3-9--1.73591118484664-1.57096726280955	chr1	40790214	40790592	+	0	NA	intron (NM_001033289, intron 3 of 11)	intron (NM_001033289, intron 3 of 11)	51846	NM_001033289	226999	Mm.256414	NM_001033289	ENSMUSG00000026062	Slc9a2	2210416H12Rik|4932415O19Rik|AV333884|NHE2	solute carrier family 9 (sodium/hydrogen exchanger), member 2	protein-coding
unique_peak2-35497-0-5--3.42509343119537-1.32905871926422	chr17	46316683	46317073	+	0	NA	intron (NM_030715, intron 9 of 10)	B1_Mus1|SINE|Alu	18897	NM_001145979	56055	Mm.22147	NM_019581	ENSMUSG00000023952	Gtpbp2	nmf205	GTP binding protein 2	protein-coding
unique_peak2-39353-3-5--0.998945590680433-0.96108193396963	chr9	5308965	5309350	+	0	NA	intron (NM_007609, intron 1 of 8)	intron (NM_007609, intron 1 of 8)	297	NM_007609	12363	Mm.1569	NM_007609	ENSMUSG00000033538	Casp4	Casp11|Caspl|ich-3	caspase 4, apoptosis-related cysteine peptidase	protein-coding
unique_peak1-257-11-5-0.923731083530457-1.477227296591	chr1	91839743	91840439	+	0	NA	Intergenic	Intergenic	-12340	NM_010262	14472	Mm.204730	NM_010262		Gbx2	D130058E05Rik|Gbx-2|MMoxA|Stra7	gastrulation brain homeobox 2	protein-coding
common_peak1-11340-45-32-0.815963905986418-1.95552668877042	chr15	86213737	86215428	+	0	NA	intron (NM_145476, intron 10 of 12)	L1MD|LINE|L1	169693	NM_145476	223754	Mm.28904	NM_145476	ENSMUSG00000051864	Tbc1d22a	BC023106|D15Ertd781e	TBC1 domain family, member 22a	protein-coding
common_peak2-25993-56-93--0.318993026238394-0.720618907161341	chr19	55252974	55254689	+	0	NA	Intergenic	Intergenic	-1544	NM_009348	21684	Mm.42139	NM_009348	ENSMUSG00000024979	Tectb	Tctnb	tectorin beta	protein-coding
common_peak1-16708-34-37-0.134141013557681-0.369793428364259	chr6	25808562	25810010	+	0	NA	Intergenic	Lx5|LINE|L1	-50060	NM_133931	101185	Mm.274589	NM_133931	ENSMUSG00000029676	Pot1a	1500031H18Rik|AI851169|Pot1	protection of telomeres 1A	protein-coding
common_peak2-19675-144-141-0.719882416937743-5.36195849014441	chr1	57405994	57407497	+	0	NA	Intergenic	Intergenic	27643	NR_037999	75323	Mm.362968	NR_037999	ENSMUSG00000097519	4930558J18Rik	-	RIKEN cDNA 4930558J18 gene	ncRNA
common_peak2-25082-9-8-0.0196884049619079-1.03275496310833	chr18	35740184	35740694	+	0	NA	intron (NM_010771, intron 6 of 14)	intron (NM_010771, intron 6 of 14)	-17882	NM_026420	67869	Mm.126534	NM_026420	ENSMUSG00000037058	Paip2	2310050K10Rik|AU045972	polyadenylate-binding protein-interacting protein 2	protein-coding
common_peak2-27545-43-82--0.592476245823222-1.46410551884986	chr3	96219779	96221074	+	0	NA	Intergenic	Intergenic	-1670	NR_001579	21748		NR_001579	ENSMUSG00000064796	Terc	mTER|mTR	telomerase RNA component	ncRNA
unique_peak2-34455-1-5--2.2120195109379-1.32905871926422	chr14	25722467	25722821	+	0	NA	Intergenic	Intergenic	240083	NR_045718	75862	Mm.109191	NR_045718		4930572O13Rik	-	RIKEN cDNA 4930572O13 gene	ncRNA
common_peak1-17508-20-39--0.83385331029617-1.34355844763204	chr7	27165909	27166978	+	0	NA	intron (NM_001042612, intron 3 of 8)	(TTTG)n|Simple_repeat|Simple_repeat	12819	NM_001042612	330490	Mm.212174	NM_194062	ENSMUSG00000040614	Nlrp9c	AA636537|BB062542|Nalp-zeta|Nalp9c	NLR family, pyrin domain containing 9C	protein-coding
unique_peak2-37660-5-8--0.874305337448166-1.10484139239135	chr5	92773348	92773796	+	0	NA	intron (NM_181728, intron 2 of 9)	Lx8|LINE|L1	4343	NM_021274	15945	Mm.877	NM_021274	ENSMUSG00000034855	Cxcl10	C7|CRG-2|INP10|IP-10|IP10|Ifi10|Scyb10|gIP-10|mob-1	chemokine (C-X-C motif) ligand 10	protein-coding
common_peak1-12086-9-18--1.05831410703937-0.965105923112245	chr17	24695592	24696213	+	0	NA	intron (NM_013630, intron 1 of 45)	MER113|DNA|MER1_type	9007	NM_013630	18763	Mm.30435	NM_013630	ENSMUSG00000032855	Pkd1	PC1|mFLJ00285	polycystic kidney disease 1 homolog	protein-coding
common_peak2-31299-11-19--0.813234510635749-0.769930178837768	chr8	73353705	73354379	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	9577	NM_027560	70807	Mm.24215	NM_027560	ENSMUSG00000002910	Arrdc2	4632416I05Rik|Ilad1	arrestin domain containing 2	protein-coding
unique_peak2-37085-5-4--0.0263084308932156-0.909929411522249	chr3	152153765	152154071	+	0	NA	intron (NM_001081277, intron 10 of 13)	intron (NM_001081277, intron 10 of 13)	94270	NM_001287139	108946	Mm.379292	NM_198416	ENSMUSG00000039068	Zzz3	3110065C23Rik|6430567E01Rik|AA408566|AI481057|AW556059|R75514	zinc finger, ZZ domain containing 3	protein-coding
unique_peak1-6822-8-3-1.00522241794757-1.39487600375387	chr8	77232933	77233382	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-163916	NM_027837	71597	Mm.158735	NM_027837	ENSMUSG00000031621	Isx	9130012O13Rik|Pix-1	intestine specific homeobox	protein-coding
common_peak1-10011-78-166--0.576883198313517-2.59327667873498	chr13	5861626	5863729	+	0	NA	intron (NM_011803, intron 1 of 3)	intron (NM_011803, intron 1 of 3)	1942	NM_011803	23849	Mm.275036	NM_011803	ENSMUSG00000000078	Klf6	AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9	Kruppel-like factor 6	protein-coding
unique_peak1-1985-33-10-1.87190594388823-4.48642921518059	chr14	123241768	123243174	+	0	NA	intron (NM_144844, intron 21 of 23)	L1_Mus2|LINE|L1	69916	NM_145466	223267	Mm.379358	NM_145466	ENSMUSG00000041625	Ggact	A2ld1	gamma-glutamylamine cyclotransferase	protein-coding
common_peak2-31797-17-20--0.174021084573723-0.306598483909156	chr9	35211127	35211774	+	0	NA	Intergenic	RSINE1|SINE|B4	-48211	NM_021339	57810	Mm.80509	NM_021339	ENSMUSG00000038119	Cdon	CDO|Cd0|Orcam	cell adhesion molecule-related/down-regulated by oncogenes	protein-coding
common_peak2-23042-6-11--1.01956439034085-1.32595962126035	chr14	69485307	69485877	+	0	NA	Intergenic	Intergenic	-161754	NM_009285	20855	Mm.20911	NM_009285	ENSMUSG00000014813	Stc1	Stc	stanniocalcin 1	protein-coding
unique_peak2-32535-8-12--0.695217300193522-0.475924844171029	chr1	65178493	65179121	+	0	NA	Intergenic	Lx9|LINE|L1	-9019	NM_001285882	98303	Mm.348057	NM_175293	ENSMUSG00000044816	D630023F18Rik	AI314969	RIKEN cDNA D630023F18 gene	protein-coding
unique_peak2-37344-4-12--1.72390023199434-1.85743853830261	chr4	132533066	132533649	+	0	NA	intron (NM_010208, intron 1 of 12)	intron (NM_010208, intron 1 of 12)	3347	NM_010208	14191	Mm.271665	NM_010208	ENSMUSG00000028874	Fgr	-	Gardner-Rasheed feline sarcoma viral (Fgr) oncogene homolog	protein-coding
unique_peak2-33983-0-11--4.42509343119537-2.83420869758413	chr12	85698121	85698648	+	0	NA	intron (NM_172581, intron 2 of 7)	intron (NM_172581, intron 2 of 7)	4387	NM_172581	217705	Mm.259468	NM_172581	ENSMUSG00000021234	Fam161b	9330169D17|9830169C18Rik	family with sequence similarity 161, member B	protein-coding
unique_peak2-36515-8-16--1.08224042330277-0.891319708951328	chr2	158514011	158514822	+	0	NA	intron (NM_001159662, intron 1 of 10)	intron (NM_001159662, intron 1 of 10)	21545	NM_001159662	228852	Mm.150540	NM_153089	ENSMUSG00000037754	Ppp1r16b	ANKRD4|C130078N17Rik|TIMAP|Wdt4	protein phosphatase 1, regulatory (inhibitor) subunit 16B	protein-coding
unique_peak2-36848-2-8--2.08737925770563-1.65811743852845	chr3	89278239	89278610	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	14931	NM_027348	68603	Mm.34242	NM_026784	ENSMUSG00000027952	Pmvk	1110011E12Rik|2900002L22Rik|AV001327|PMK|PMKA|PMKASE	phosphomevalonate kinase	protein-coding
unique_peak1-161-9-0-3.18961340640422-3.01029995663981	chr1	73665631	73666141	+	0	NA	intron (NR_045311, intron 8 of 8)	intron (NR_045311, intron 8 of 8)	-211743	NR_003202	723792	Mm.385493	NR_003202		Pinc	-	pregnancy induced noncoding RNA	ncRNA
common_peak1-11015-55-102--0.481880656030516-1.27244447704216	chr15	38077989	38079134	+	0	NA	Intergenic	Intergenic	-69952	NM_001081359	70790	Mm.476840	NM_027553	ENSMUSG00000037487	Ubr5	Edd|Edd1	ubiquitin protein ligase E3 component n-recognin 5	protein-coding
common_peak1-11058-26-13-1.12054417010086-1.80107744087171	chr15	55187509	55188395	+	0	NA	intron (NM_181277, intron 5 of 47)	intron (NM_181277, intron 5 of 47)	48647	NM_181277	12818	Mm.297859	NM_181277	ENSMUSG00000022371	Col14a1	5730412L22Rik|AW108078	collagen, type XIV, alpha 1	protein-coding
unique_peak1-1882-10-3-1.35641534500877-1.75805390616669	chr14	62370260	62370764	+	0	NA	Intergenic	Intergenic	-69302	NR_028264	668253	Mm.32886	NR_028264	ENSMUSG00000097589	Dleu2	1810047A16Rik|4932411A06Rik|7730401J12Rik|AI197277|AI788824|Alt1|Gm9069|Leu2	deleted in lymphocytic leukemia, 2	ncRNA
common_peak1-17340-69-35-1.42521744581642-6.88047028022273	chr6	149100311	149101872	+	0	NA	Intergenic	BGLII|LTR|ERVK	11056	NM_177101	320204	Mm.274099	NM_177101	ENSMUSG00000039958	Mettl20	4833442J19Rik|AI256744	methyltransferase like 20	protein-coding
unique_peak2-36537-4-9--1.34538860874061-1.36011389749466	chr2	164513529	164514022	+	0	NA	TTS (NM_001012704)	TTS (NM_001012704)	3168	NM_001012704	408190	Mm.376205	NM_001012704	ENSMUSG00000067704	Wfdc13	Wfdc13l1	WAP four-disulfide core domain 13	protein-coding
unique_peak2-35632-4-11--1.6084230145744-1.68134727924692	chr17	87571211	87571581	+	0	NA	Intergenic	Intergenic	22886	NR_046016	399626	Mm.396062	NR_046016		C330024C12Rik	-	RIKEN cDNA C330024C12 gene	ncRNA
common_peak2-19933-10-6-0.549060422951165-1.21398586181642	chr1	127773627	127774027	+	0	NA	intron (NM_145100, intron 2 of 2)	Lx9|LINE|L1	34964	NM_145100	72585	Mm.490405	NM_145100		Lypd1	2700050C12Rik|AI853408|C530008O16Rik|Lynx2|Lypdc1	Ly6/Plaur domain containing 1	protein-coding
common_peak1-7971-15-32--1.0322293688028-1.48160942223867	chr1	156718293	156719103	+	0	NA	Intergenic	L1M2|LINE|L1	-145648	NM_009782	12290	Mm.267517	NM_009782	ENSMUSG00000004110	Cacna1e	A430040I15|BII|Cach6|Cacnl1a6|Cav2.3|Cchra1|alpha1E	calcium channel, voltage-dependent, R type, alpha 1E subunit	protein-coding
common_peak1-18841-8-8--0.164702583494742-1.00793137938329	chr9	15306270	15306749	+	0	NA	Intergenic	Intergenic	-3430	NM_133214	170748	Mm.86572	NM_133214	ENSMUSG00000058173	Smco4	Fn5	single-pass membrane protein with coiled-coil domains 4	protein-coding
common_peak2-19944-8-15--0.994777582052429-0.771068449301683	chr1	131089777	131090362	+	0	NA	Intergenic	Intergenic	-79812	NM_172485	210417	Mm.380518	NM_172485	ENSMUSG00000042581	Thsd7b	1700074E13Rik|B930082A18|D130067I03Rik	thrombospondin, type I, domain containing 7B	protein-coding
unique_peak2-34978-5-10--1.16381195464315-1.33892459842472	chr15	98918344	98918753	+	0	NA	promoter-TSS (NM_001024702)	promoter-TSS (NM_001024702)	-389	NM_001024702	239659	Mm.309917	NM_001024702	ENSMUSG00000001076	C1ql4	C1qtnf11|CTRP11	complement component 1, q subcomponent-like 4	protein-coding
common_peak1-15975-73-125--0.284884917074695-0.762709661588011	chr5	31697156	31698838	+	0	NA	Intergenic	L1_Mur1|LINE|L1	-56812	NM_172993	269639	Mm.259127	NM_172993	ENSMUSG00000062761	Zfp512	2500002M11Rik|AI450173|D230008H22|Znf512	zinc finger protein 512	protein-coding
common_peak2-30322-7-14--1.10779976531033-0.817533494790411	chr7	24804924	24805376	+	0	NA	Intergenic	RLTR9E|LTR|ERVK	17020	NM_207619	404287	Mm.377931	NM_207619		V1rd19	Vmn1r182	vomeronasal 1 receptor, D19	protein-coding
unique_peak1-2485-10-1-2.35641534500877-2.57096726280955	chr16	6963963	6964423	+	0	NA	intron (NM_021477, intron 5 of 16)	intron (NM_021477, intron 5 of 16)	-105735	NM_183188	268859	Mm.370334	NM_021477	ENSMUSG00000008658	Rbfox1	A2bp|A2bp1|Hrnbp1|fox-1	RNA binding protein, fox-1 homolog (C. elegans) 1	protein-coding
common_peak1-13890-36-33-0.391858244917415-0.703513783457792	chr2	75937838	75939031	+	0	NA	intron (NM_001081033, intron 10 of 19)	intron (NM_001081033, intron 10 of 19)	-118410	NM_030188	78802	Mm.282339	NM_030188	ENSMUSG00000075271	Ttc30a1	4930506L13Rik	tetratricopeptide repeat domain 30A1	protein-coding
common_peak2-20759-9-17--0.980311595038092-0.844317084070804	chr10	115816777	115817316	+	0	NA	intron (NM_029928, intron 30 of 31)	intron (NM_029928, intron 30 of 31)	-38131	NR_028107	67342	Mm.245800	NM_026098	ENSMUSG00000020164	Kcnmb4os1	1700058G18Rik	potassium large conductance calcium-activated channel, subfamily M, beta member 4, opposite strand 1	ncRNA
unique_peak2-35686-3-6--1.22133801201688-1.08602067057793	chr18	20713804	20714114	+	0	NA	Intergenic	Intergenic	-2658	NM_007883	13511	Mm.345891	NM_007883	ENSMUSG00000044393	Dsg2	AA408168|D18Ertd293e	desmoglein 2	protein-coding
common_peak2-30873-62-102--0.275749068381134-0.637084967933602	chr7	140855650	140858051	+	0	NA	intron (NM_178115, intron 22 of 24)	intron (NM_178115, intron 22 of 24)	14894	NM_152944	214766	Mm.222952	NM_152944	ENSMUSG00000030981	Mmp21	b2b873Clo	matrix metallopeptidase 21	protein-coding
unique_peak2-33359-6-6--0.241956811677302-0.947717972411649	chr11	31870975	31871327	+	0	NA	intron (NM_026262, intron 1 of 4)	intron (NM_026262, intron 1 of 4)	5518	NM_026262	67592	Mm.78654	NM_026262	ENSMUSG00000020299	4930524B15Rik	-	RIKEN cDNA 4930524B15 gene	protein-coding
unique_peak2-34946-8-5-0.420259917226415-1.10484139239135	chr15	89356572	89356998	+	0	NA	intron (NM_021423, intron 12 of 21)	intron (NM_021423, intron 12 of 21)	26497	NM_021423	58234	Mm.146855	NM_021423	ENSMUSG00000022623	Shank3	AI841104|SHANK3c-3|SHANK3c-4|Shank3b	SH3/ankyrin domain gene 3	protein-coding
common_peak1-9265-9-21--1.26981821223308-1.37307999835977	chr11	87109201	87109742	+	0	NA	intron (NM_177167, intron 1 of 6)	MTE-int|LTR|MaLR	63025	NM_177167	320472	Mm.341988	NM_177167	ENSMUSG00000046442	Ppm1e	AW049266|B930008A12Rik|POPX1|PP2CH|mKIAA1072	protein phosphatase 1E (PP2C domain containing)	protein-coding
common_peak2-30604-15-13-0.204809828498052-0.368541233333383	chr7	83892219	83892830	+	0	NA	intron (NM_001199224, intron 20 of 22)	Lx2|LINE|L1	517751	NM_001199224	244071	Mm.322829	NM_172902	ENSMUSG00000025754	Agbl1	Ccp4|D430020F16|EG244071|Nna1-l1	ATP/GTP binding protein-like 1	protein-coding
unique_peak1-6668-11-6-0.701338662194009-1.32595962126035	chr8	18768874	18769387	+	0	NA	intron (NM_173189, intron 12 of 13)	RMER10B|LTR|ERVL	-27568	NM_007426	11601	Mm.439874	NM_007426	ENSMUSG00000031465	Angpt2	Agpt2|Ang-2|Ang2	angiopoietin 2	protein-coding
unique_peak2-34680-5-7--0.704380336005853-1.01466476204226	chr15	8644258	8644742	+	0	NA	intron (NM_148938, intron 2 of 9)	intron (NM_148938, intron 2 of 9)	16307	NM_148938	20512	Mm.204834	NM_148938	ENSMUSG00000005360	Slc1a3	AI504299|B430115D02Rik|Eaat1|GLAST|GLAST-1|GLU-T|GluT-1|Gmt1|MGluT1	solute carrier family 1 (glial high affinity glutamate transporter), member 3	protein-coding
unique_peak2-33612-1-5--2.2120195109379-1.32905871926422	chr11	94989672	94989936	+	0	NA	Intergenic	Intergenic	8373	NM_010055	13393	Mm.5194	NM_010055	ENSMUSG00000001510	Dlx3	AV237891|Dlx-3	distal-less homeobox 3	protein-coding
common_peak2-25788-27-29-0.0846553552867171-0.333081040816753	chr19	36119720	36120813	+	0	NA	intron (NM_008315, intron 1 of 2)	(TA)n|Simple_repeat|Simple_repeat	11584	NM_008315	15566	Mm.254266	NM_008315	ENSMUSG00000024798	Htr7	5-HT7	5-hydroxytryptamine (serotonin) receptor 7	protein-coding
common_peak2-23835-12-9-0.326847890200276-0.459837087125828	chr15	101772426	101772854	+	0	NA	Intergenic	L2b|LINE|L2	-1885	NM_146063	223917	Mm.162744	NM_146063	ENSMUSG00000061397	Krt79	BC031593	keratin 79	protein-coding
unique_peak1-2132-8-0-3.00522241794757-2.70926996097583	chr15	54386912	54387439	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-15746	NM_178920	105853	Mm.410994	NM_178920	ENSMUSG00000024479	Mal2	AI461653	mal, T cell differentiation protein 2	protein-coding
common_peak2-32060-12-31--1.35122401491236-1.94790812833823	chr9	88438364	88439527	+	0	NA	Intergenic	Lx3_Mus|LINE|L1	-3913	NM_001142943	71640	Mm.259988	NM_001142943	ENSMUSG00000032425	Zfp949	4930422I07Rik	zinc finger protein 949	protein-coding
common_peak1-11162-85-157--0.348377500052452-1.1445172722821	chr15	76008651	76010105	+	0	NA	exon (NM_201390, exon 31 of 32)	exon (NM_201390, exon 31 of 32)	16762	NM_201394	18810	Mm.234912	NM_011117	ENSMUSG00000022565	Plec	AA591047|AU042537|EBS1|PCN|PLTN|Plec1	plectin	protein-coding
common_peak2-28678-23-22-0.198205548452068-0.373496418836697	chr5	32195422	32196587	+	0	NA	intron (NM_181281, intron 5 of 10)	intron (NM_181281, intron 5 of 10)	195581	NM_181282	107976	Mm.482126	NM_144541	ENSMUSG00000052139	Bre	6030405P19Rik|AI429776|B830038C02Rik	brain and reproductive organ-expressed protein	protein-coding
common_peak1-18299-20-15-0.488074784591193-0.590343908676236	chr8	45628425	45629246	+	0	NA	Intergenic	Intergenic	-406727	NM_001081286	14107	Mm.27365	NM_001081286	ENSMUSG00000070047	Fat1	2310038E12Rik|AU023433|Fath|mFat1	FAT tumor suppressor homolog 1 (Drosophila)	protein-coding
common_peak1-13520-8-15--0.994777582052429-0.771068449301683	chr2	134643679	134644165	+	0	NA	intron (NM_001145830, intron 2 of 31)	intron (NM_001145830, intron 2 of 31)	32022	NM_001145830	18795	Mm.330607	NM_019677	ENSMUSG00000051177	Plcb1	3110043I21Rik|AI132408|Plcb|mKIAA0581	phospholipase C, beta 1	protein-coding
common_peak1-13301-51-58-0.192280776240731-0.441863235260255	chr19	40830749	40832120	+	0	NA	Intergenic	Intergenic	-74335	NM_172839	240665	Mm.309	NM_172839	ENSMUSG00000025010	Ccnj	D430039C20Rik	cyclin J	protein-coding
common_peak2-29751-15-6-1.20480982849805-1.32521814697968	chr6	86497508	86497915	+	0	NA	intron (NR_037960, intron 3 of 4)	intron (NR_037960, intron 3 of 4)	20316	NR_037961	72012	Mm.349174	NR_037960	ENSMUSG00000097048	1600020E01Rik	-	RIKEN cDNA 1600020E01 gene	ncRNA
unique_peak1-2857-21-2-2.98452676454508-5.06563262809273	chr17	32915791	32916831	+	0	NA	intron (NM_172458, intron 1 of 3)	MTE2a|LTR|MaLR	8921	NM_172458	208292	Mm.38813	NM_172458		Zfp871	4732483N19|9030612M13Rik|AI118577|AI265322|mKIAA3006	zinc finger protein 871	protein-coding
common_peak1-8122-20-18-0.240147271147608-0.388034239052786	chr1	184882322	184883305	+	0	NA	Intergenic	Intergenic	-2106	NM_016928	53791	Mm.116894	NM_016928	ENSMUSG00000079164	Tlr5	-	toll-like receptor 5	protein-coding
unique_peak2-35661-9-18--1.05831410703937-0.965105923112245	chr18	6033579	6034206	+	0	NA	intron (NM_001039692, intron 13 of 18)	intron (NM_001039692, intron 13 of 18)	102204	NM_029277	75415	Mm.239675	NM_029277	ENSMUSG00000041225	Arhgap12	2810011M08Rik	Rho GTPase activating protein 12	protein-coding
common_peak2-20489-5-8--0.874305337448166-1.10484139239135	chr10	56377953	56378434	+	0	NA	Intergenic	L1_Mur1|LINE|L1	281087	NM_010288	14609	Mm.378921	NM_010288	ENSMUSG00000050953	Gja1	AU042049|AW546267|Cnx43|Cx43|Cx43alpha1|Gja-1|Npm1|connexin43	gap junction protein, alpha 1	protein-coding
unique_peak2-36091-8-15--0.994777582052429-0.771068449301683	chr19	57203885	57204676	+	0	NA	intron (NM_001290813, intron 6 of 20)	ID_B1|SINE|B4	-10766	NM_001103178	226251	Mm.217161	NM_178688	ENSMUSG00000025085	Ablim1	2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059	actin-binding LIM protein 1	protein-coding
unique_peak1-5148-12-1-2.64877598508764-3.36932189928148	chr5	17519528	17520035	+	0	NA	intron (NM_001081143, intron 5 of 7)	intron (NM_001081143, intron 5 of 7)	51393	NM_001081143	242851	Mm.332230	NM_001081143	ENSMUSG00000028777	Gnat3	Ggust|Gtn	guanine nucleotide binding protein, alpha transducing 3	protein-coding
unique_peak1-5697-12-3-1.64877598508764-2.36932189928148	chr6	34719043	34719576	+	0	NA	intron (NM_145575, intron 10 of 11)	intron (NM_145575, intron 10 of 11)	-11123	NM_001289657	76223	Mm.150047	NM_178630	ENSMUSG00000038836	Agbl3	2900053G10Rik|4930431N21Rik|6530406M24Rik|CCP3	ATP/GTP binding protein-like 3	protein-coding
common_peak1-15599-31-34-0.095955653868157-0.328563898667783	chr4	130162928	130164212	+	0	NA	intron (NM_025998, intron 3 of 6)	B1_Mus1|SINE|Alu	37865	NM_025998	67149	Mm.423029	NM_025998		Nkain1	2610200G18Rik|2810426C15Rik	Na+/K+ transporting ATPase interacting 1	protein-coding
common_peak2-23296-72-121--0.262153524690569-0.652981896997973	chr15	34082279	34083966	+	0	NA	Intergenic	Intergenic	70648	NM_026002	67154	Mm.130883	NM_026002	ENSMUSG00000022255	Mtdh	2610103J23Rik|3D3|3D3/Lyric|AEG-1|AV353288|D8Bwg1112e|Lyric	metadherin	protein-coding
common_peak2-31571-12-28--1.20920501003993-1.52081014994907	chr8	119419223	119420031	+	0	NA	intron (NM_026844, intron 2 of 3)	intron (NM_026844, intron 2 of 3)	25709	NM_026844	66531	Mm.4011	NM_026844	ENSMUSG00000014633	Cmc2	1110046L09Rik|2310061C15Rik|DC13	COX assembly mitochondrial protein 2	protein-coding
common_peak1-9866-99-146-0.0196853984462866-0.307654940936934	chr12	80945012	80946438	+	0	NA	Intergenic	Intergenic	268275	NM_007564	12192	Mm.235132	NM_007564	ENSMUSG00000021127	Zfp36l1	AW742437|AW743212|Berg36|Brf1|D530020L18Rik|ERF1|TIS11b|cMG1	zinc finger protein 36, C3H type-like 1	protein-coding
unique_peak1-4452-8-5-0.420259917226415-1.10484139239135	chr2	173254072	173254578	+	0	NA	Intergenic	Intergenic	-93768	NM_028158	72221	Mm.46132	NM_028158	ENSMUSG00000027518	1700021F07Rik	-	RIKEN cDNA 1700021F07 gene	protein-coding
common_peak2-28297-10-9-0.0344872501214071-1.05503135781948	chr4	132308601	132309135	+	0	NA	intron (NM_133888, intron 1 of 7)	intron (NM_133888, intron 1 of 7)	4218	NM_133888	100340	Mm.287187	NM_133888	ENSMUSG00000028885	Smpdl3b	1110054A24Rik|AU045240|Asml3b	sphingomyelin phosphodiesterase, acid-like 3B	protein-coding
common_peak1-18351-42-71--0.427595673575128-0.804633617149182	chr8	69774207	69775192	+	0	NA	Intergenic	Lx4B|LINE|L1	-239958	NM_008673	17960	Mm.14125	NM_008673	ENSMUSG00000025588	Nat1	Nat-1	N-acetyl transferase 1	protein-coding
common_peak2-30831-35-24-0.78751406868778-1.48724131519612	chr7	131409843	131410590	+	0	NA	intron (NM_001252072, intron 1 of 1)	intron (NM_001252072, intron 1 of 1)	283521	NM_001252072	628779	Mm.40210	NM_001252072	ENSMUSG00000078591	Hs3st4	EG628779|Gm6915	heparan sulfate (glucosamine) 3-O-sulfotransferase 4	protein-coding
common_peak2-29972-13-28--1.0795089644898-1.33403699391683	chr6	120038138	120038711	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-4974	NM_016718	29862	Mm.103668	NM_016718	ENSMUSG00000041377	Ninj2	-	ninjurin 2	protein-coding
unique_peak2-35854-5-7--0.704380336005853-1.01466476204226	chr18	75456048	75456580	+	0	NA	intron (NR_045393, intron 2 of 2)	(CA)n|Simple_repeat|Simple_repeat	657	NR_045394	100503117	Mm.250517	NR_045393		2010010A06Rik	5033420E22Rik	RIKEN cDNA 2010010A06 gene	ncRNA
unique_peak1-6824-9-0-3.18961340640422-3.01029995663981	chr8	78464285	78464772	+	0	NA	intron (NM_001164235, intron 13 of 13)	intron (NM_001164235, intron 13 of 13)	491935	NM_001164235	71831	Mm.443238	NM_027944	ENSMUSG00000031620	1700007B14Rik	-	RIKEN cDNA 1700007B14 gene	protein-coding
unique_peak1-3004-24-3-2.79320990276772-5.35253599412607	chr17	84096239	84097119	+	0	NA	Intergenic	L2a|LINE|L2	-8824	NM_001171054	116871	Mm.277668	NM_054082	ENSMUSG00000055817	Mta3	1110002J22Rik|mKIAA1266	metastasis associated 3	protein-coding
common_peak1-14428-11-16--0.578769256998726-0.503257505534083	chr2	180582786	180583357	+	0	NA	Intergenic	Intergenic	-45674	NR_029538	723951		NR_029538		Mir124a-3	Mirn124a-3|mir-124a-3	microRNA 124a-3	ncRNA
common_peak1-9054-17-15-0.218296338205038-0.403453972741633	chr11	68445384	68446222	+	0	NA	Intergenic	Intergenic	45264	NM_177779	276920	Mm.123046	NM_177779	ENSMUSG00000045915	Ccdc42	A530001H01Rik	coiled-coil domain containing 42	protein-coding
common_peak1-12462-46-37-0.650068429805216-1.49662016474183	chr17	84070395	84072045	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-34283	NM_001171054	116871	Mm.277668	NM_054082	ENSMUSG00000055817	Mta3	1110002J22Rik|mKIAA1266	metastasis associated 3	protein-coding
common_peak1-19178-13-11-0.193509529916613-0.379391706698377	chr9	96952937	96953556	+	0	NA	Intergenic	Intergenic	-34472	NM_145134	211949	Mm.491271	NM_145134	ENSMUSG00000046997	Spsb4	D030068E18Rik|SSB-4|Ssb4	splA/ryanodine receptor domain and SOCS box containing 4	protein-coding
common_peak1-18471-20-19-0.16614668970383-0.348739088570342	chr8	84687209	84688156	+	0	NA	Intergenic	L1_Mus4|LINE|L1	238803	NM_001254747	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
unique_peak2-32959-7-11--0.785871670422967-1.21681515183528	chr10	43578348	43578882	+	0	NA	Intergenic	L1Md_F2|LINE|L1	42927	NM_001081054	76563	Mm.5904	NM_001081054	ENSMUSG00000019863	Qrsl1	2700038P16Rik|C80053|GatA	glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1	protein-coding
unique_peak1-765-12-3-1.64877598508764-2.36932189928148	chr10	121756604	121757279	+	0	NA	Intergenic	Intergenic	-128614	NM_016847	54140	Mm.4351	NM_016847	ENSMUSG00000020123	Avpr1a	AVPR|Avpr1|V1a|V1aR	arginine vasopressin receptor 1A	protein-coding
unique_peak2-33166-10-11--0.228547155712387-0.31137425193576	chr10	94480227	94480933	+	0	NA	Intergenic	ORR1A3|LTR|MaLR	-73368	NM_018797	54712	Mm.256712	NM_018797	ENSMUSG00000074785	Plxnc1	2510048K12Rik|AW742158|CD232|Vespr	plexin C1	protein-coding
unique_peak2-37711-6-13--1.2419568116773-1.58711810488664	chr5	104056611	104057174	+	0	NA	intron (NM_029415, intron 1 of 5)	intron (NM_029415, intron 1 of 5)	1530	NM_029415	75750	Mm.7446	NM_029415	ENSMUSG00000029321	Slc10a6	8430417G17Rik|C78479|Soat	solute carrier family 10 (sodium/bile acid cotransporter family), member 6	protein-coding
common_peak2-30516-18-40--1.04463285338973-1.77675427888235	chr7	65861774	65862913	+	0	NA	Intergenic	MER67A|LTR|ERV1	-51229	NM_009728	11982	Mm.135129	NM_009728	ENSMUSG00000025324	Atp10a	Atp10c|pfatp	ATPase, class V, type 10A	protein-coding
unique_peak2-35489-8-17--1.16470258349474-1.02063122982878	chr17	46073438	46074102	+	0	NA	Intergenic	Intergenic	88342	NM_001110267	22339	Mm.282184	NM_009505	ENSMUSG00000023951	Vegfa	Vegf|Vpf	vascular endothelial growth factor A	protein-coding
common_peak1-9698-36-28-0.621340091040183-1.16863888781394	chr12	24498239	24499218	+	0	NA	Intergenic	Intergenic	283406	NM_001256489	66808	Mm.379124	NM_001256489		9030624G23Rik	-	RIKEN cDNA 9030624G23 gene	protein-coding
unique_peak2-39855-3-11--1.99894559068043-1.95434855131066	chrX	71492973	71493593	+	0	NA	Intergenic	B3|SINE|B2	-1410	NM_001290421	192176	Mm.295533	NM_010227	ENSMUSG00000031328	Flna	ABP-280|Dilp2|F730004A14Rik|Fln1|GENA 379|filamin-1	filamin, alpha	protein-coding
common_peak2-21154-18-11-0.727956650507195-0.876666802405043	chr11	58104215	58104800	+	0	NA	Intergenic	Intergenic	-16064	NM_182996	103836	Mm.41440	NM_182996	ENSMUSG00000037243	Zfp692	AI746306|AI839920|Zfp692-ps|Znf692	zinc finger protein 692	protein-coding
common_peak2-29424-98-96-0.601855851243423-2.64268103740195	chr6	6577618	6578799	+	0	NA	Intergenic	Intergenic	-49550	NM_009169	20422	Mm.2469	NM_009169		Shfm1	DSS1|Shfdg1|Shfg	split hand/foot malformation (ectrodactyly) type 1	protein-coding
unique_peak1-6393-21-2-2.98452676454508-5.06563262809273	chr7	79262445	79263484	+	0	NA	intron (NM_001024703, intron 19 of 22)	MTD|LTR|MaLR	188517	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding
common_peak1-8555-13-39--1.54345606424959-2.96631085054194	chr10	93640795	93641538	+	0	NA	intron (NM_011629, intron 9 of 13)	L1Md_A|LINE|L1	-20588	NM_025551	66414	Mm.27886	NM_025551	ENSMUSG00000020022	Ndufa12	2410011G03Rik|AW112974	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12	protein-coding
unique_peak1-5239-24-3-2.79320990276772-5.35253599412607	chr5	47274091	47275103	+	0	NA	Intergenic	(CACCAT)n|Simple_repeat|Simple_repeat	-950949	NR_110478	78106	Mm.243807	NR_110478		4930405L22Rik	-	RIKEN cDNA 4930405L22 gene	ncRNA
common_peak2-25429-8-6-0.197867495889966-1.03789460276074	chr19	3829586	3829879	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-22041	NM_001271496	12660	Mm.225505	NM_013490	ENSMUSG00000024843	Chka	CK|CK/EK-alpha|Chetk-alpha|Chk|ChoK|EK|EtnK-alpha	choline kinase alpha	protein-coding
common_peak1-16788-75-81-0.381514987125201-1.08434426040867	chr6	39724578	39725811	+	0	NA	Intergenic	Intergenic	35741	NM_010270	14548	Mm.377071	NM_010270	ENSMUSG00000029918	Mrps33	AI841153|CGI-139|Gdap3|MRP-S33|PTD003	mitochondrial ribosomal protein S33	protein-coding
unique_peak1-7279-11-1-2.50869358425161-2.83420869758413	chr9	100561839	100562447	+	0	NA	intron (NM_009282, intron 1 of 33)	L1M4c|LINE|L1	18101	NM_009282	20842	Mm.42135	NM_009282	ENSMUSG00000037286	Stag1	AU045003|SA-1|Scc3	stromal antigen 1	protein-coding
common_peak2-28151-4-8--1.19338551529556-1.21878474469819	chr4	103249784	103250176	+	0	NA	Intergenic	Intergenic	194875	NR_040673	622167	Mm.244115	NR_040673	ENSMUSG00000086136	Gm12718	OTTMUSG00000008109	predicted gene 12718	ncRNA
common_peak1-18373-14-16--0.188246680892695-0.308035960714963	chr8	70607696	70608428	+	0	NA	Intergenic	Intergenic	-109589	NM_177698	234353	Mm.32525	NM_027626	ENSMUSG00000030465	Psd3	4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D	pleckstrin and Sec7 domain containing 3	protein-coding
common_peak1-15436-10-9-0.0344872501214071-1.05503135781948	chr4	89125477	89126041	+	0	NA	Intergenic	Intergenic	-168818	NM_007670	12579	Mm.423094	NM_007670	ENSMUSG00000073802	Cdkn2b	AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b	cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)	protein-coding
unique_peak1-6404-11-6-0.701338662194009-1.32595962126035	chr7	80779244	80779708	+	0	NA	Intergenic	AT_rich|Low_complexity|Low_complexity	51973	NR_033604	244061	Mm.484605	NR_033604		Gm4971	EG244061	Smad nuclear interacting protein 1 pseudogene	pseudo
unique_peak2-39741-4-6--0.830815435910851-0.989110657569874	chr9	123478728	123479051	+	0	NA	intron (NM_030692, intron 9 of 19)	(TATG)n|Simple_repeat|Simple_repeat	39889	NM_030692	83493	Mm.273671	NM_030692	ENSMUSG00000025240	Sacm1l	SAC1|Sac1p|mKIAA0851	SAC1 (suppressor of actin mutations 1, homolog)-like (S. cerevisiae)	protein-coding
common_peak2-23927-42-44-0.250476231537509-0.522994948702178	chr16	11007864	11009475	+	0	NA	promoter-TSS (NR_040518)	promoter-TSS (NR_040518)	-322	NR_040518	100043147	Mm.489001	NR_040518	ENSMUSG00000097056	Gm4262	-	predicted gene 4262	ncRNA
common_peak1-7867-73-50-1.01996966445373-4.37156477859418	chr1	133225795	133228211	+	0	NA	intron (NM_001081011, intron 13 of 22)	intron (NM_001081011, intron 13 of 22)	-50863	NM_019777	56489	Mm.386783	NM_019777	ENSMUSG00000042349	Ikbke	AW558201|IKK-i|IKKepsilon|Ikki	inhibitor of kappaB kinase epsilon	protein-coding
unique_peak2-37080-10-15--0.643584654991231-0.519648556297791	chr3	148989518	148990160	+	0	NA	Intergenic	Intergenic	52138	NR_040591	381482	Mm.393866	NR_040591		Gm1653	-	predicted gene 1653	ncRNA
common_peak1-15348-22-37--0.600643408356181-0.808568985218824	chr4	55350102	55350912	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	-12407	NM_009011	19359	Mm.196846	NM_009011	ENSMUSG00000028426	Rad23b	0610007D13Rik|AV001138|HR23B|mHR23B|p58	RAD23b homolog (S. cerevisiae)	protein-coding
common_peak2-25125-12-12--0.0516637330534535-0.309718203022949	chr18	38881197	38881697	+	0	NA	Intergenic	Intergenic	-120525	NM_011898	24066	Mm.42038	NM_011898	ENSMUSG00000024427	Spry4	A030006O18Rik|sprouty4	sprouty homolog 4 (Drosophila)	protein-coding
common_peak1-19102-58-114--0.549540116053878-1.68695178461473	chr9	72639813	72641443	+	0	NA	Intergenic	B4A|SINE|B4	-14453	NM_175485	235472	Mm.31696	NM_175485	ENSMUSG00000036030	Prtg	A230098A12Rik|Igdcc5	protogenin homolog (Gallus gallus)	protein-coding
common_peak2-21661-35-31-0.431370258462504-0.725458513490992	chr11	102880833	102881473	+	0	NA	Intergenic	Intergenic	-2692	NM_026551	68087	Mm.277449	NM_026551	ENSMUSG00000020935	Dcakd	3010024O21Rik|6720485C15Rik|AI849483	dephospho-CoA kinase domain containing	protein-coding
common_peak2-19827-13-7-0.778472030637769-0.817533494790411	chr1	89120515	89121043	+	0	NA	intron (NM_001039169, intron 3 of 6)	intron (NM_001039169, intron 3 of 6)	10265	NM_001039169	26987	Mm.227183	NM_023314	ENSMUSG00000026254	Eif4e2	2700069E09Rik|AI036339|AV129531|D0H0S6743E|Eif4el3	eukaryotic translation initiation factor 4E member 2	protein-coding
unique_peak1-1559-18-1-3.31291915122835-4.8766546284749	chr13	28731519	28732360	+	0	NA	intron (NR_045053, intron 5 of 8)	intron (NR_045053, intron 5 of 8)	70803	NR_105787	102466635		NR_105787	miRBase:MI0021897	Mir6368	mmu-mir-6368	microRNA mir-6368	ncRNA
common_peak2-29130-32-53--0.475795482943808-0.765450243834444	chr5	124445377	124446713	+	0	NA	promoter-TSS (NR_105999)	promoter-TSS (NR_105999)	-816	NR_105999	102465625		NR_105999		Mir7032	mmu-mir-7032	microRNA mir-7032	ncRNA
common_peak2-22805-74-104-0.00164105931248493-0.302068981642426	chr14	13960431	13961957	+	0	NA	Intergenic	Intergenic	155958	NR_121589	328354	Mm.252404	NM_177813	ENSMUSG00000051729	Gm5087	C630025C03|EG328354	predicted gene 5087	ncRNA
unique_peak1-6125-7-0-2.79909083029819-2.40823996531185	chr6	129406042	129406530	+	0	NA	Intergenic	L1Md_F3|LINE|L1	-4268	NM_175526	243653	Mm.131289	NM_175526	ENSMUSG00000033082	Clec1a	5930406N14Rik	C-type lectin domain family 1, member a	protein-coding
common_peak1-18490-10-16--0.73104749624157-0.604422558181019	chr8	85036640	85037374	+	0	NA	Intergenic	L1Md_F|LINE|L1	-110522	NM_008357	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak1-14867-36-49--0.16453510360697-0.338002390994162	chr3	95433727	95435060	+	0	NA	TTS (NM_001026212)	TTS (NM_001026212)	5491	NM_001026212	56205	Mm.241365	NM_019561	ENSMUSG00000038619	Ensa	1700020C18Rik|2610007F17Rik|AI451924	endosulfine alpha	protein-coding
common_peak2-29114-220-258-0.590362270143359-6.18094426062748	chr5	123138002	123140492	+	0	NA	intron (NM_001038845, intron 12 of 12)	intron (NM_001038845, intron 12 of 12)	-18319	NM_011026	18438	Mm.290884	NM_011026	ENSMUSG00000029470	P2rx4	AI504491|AW555605|D5Ertd444e|P2X4	purinergic receptor P2X, ligand-gated ion channel 4	protein-coding
unique_peak1-5276-10-3-1.35641534500877-1.75805390616669	chr5	65453351	65453896	+	0	NA	Intergenic	Intergenic	-68847	NM_175174	71778	Mm.10281	NM_175174	ENSMUSG00000054920	Klhl5	1300013C10Rik	kelch-like 5	protein-coding
common_peak1-8472-24-35--0.376715098674596-0.470271536760928	chr10	80249189	80249964	+	0	NA	intron (NM_199322, intron 21 of 27)	intron (NM_199322, intron 21 of 27)	11795	NM_023900	78670	Mm.41479	NM_023900	ENSMUSG00000035278	Plekhj1	9530063M10Rik	pleckstrin homology domain containing, family J member 1	protein-coding
common_peak1-16481-24-17-0.623284901325404-0.890873221665474	chr5	137630580	137631468	+	0	NA	Intergenic	Intergenic	-38947	NM_201373	384309	Mm.100647	NM_201373		Trim56	A130009K11Rik|Gm452|RNF109	tripartite motif-containing 56	protein-coding
common_peak1-17540-11-9-0.186765489364251-0.344532117358383	chr7	28961732	28962231	+	0	NA	intron (NM_007991, intron 5 of 8)	MIRb|SINE|MIR	-2521	NM_001037957	13549	Mm.57249	NM_010092	ENSMUSG00000002409	Dyrk1b	Mirk	dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b	protein-coding
unique_peak1-793-7-0-2.79909083029819-2.40823996531185	chr11	86834886	86835405	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	-27881	NM_001005341	77864	Mm.191894	NM_001005341	ENSMUSG00000018427	Ypel2	6430570G24|E130113K08Rik	yippee-like 2 (Drosophila)	protein-coding
unique_peak2-35314-2-7--1.91745425626332-1.45399745587252	chr17	14640691	14641123	+	0	NA	Intergenic	Intergenic	-104958	NR_027986	74917	Mm.32228	NM_183107		4930474M22Rik	-	RIKEN cDNA 4930474M22 gene	ncRNA
common_peak1-16401-13-29--1.12841856497075-1.46151065785802	chr5	124540670	124541346	+	0	NA	intron (NM_019875, intron 1 of 11)	intron (NM_019875, intron 1 of 11)	4799	NM_019875	56325	Mm.254839	NM_019875	ENSMUSG00000029408	Abcb9	TAPL|mKIAA1520	ATP-binding cassette, sub-family B (MDR/TAP), member 9	protein-coding
common_peak2-23504-11-19--0.813234510635749-0.769930178837768	chr15	76343521	76344106	+	0	NA	Intergenic	Intergenic	-1565	NM_010046	13350	Mm.22633	NM_010046	ENSMUSG00000022555	Dgat1	ARAT|C75990|D15Ertd23e|Dgat	diacylglycerol O-acyltransferase 1	protein-coding
unique_peak2-35530-5-6--0.511735258063458-0.947717972411649	chr17	53566226	53566651	+	0	NA	intron (NM_172497, intron 6 of 12)	intron (NM_172497, intron 6 of 12)	36208	NM_172497	211482	Mm.60887	NM_172497	ENSMUSG00000023931	Efhb	4921525D22Rik	EF hand domain family, member B	protein-coding
common_peak2-30377-11-9-0.186765489364251-0.344532117358383	chr7	28961722	28962314	+	0	NA	intron (NM_007991, intron 5 of 8)	MIRb|SINE|MIR	-2484	NM_001037957	13549	Mm.57249	NM_010092	ENSMUSG00000002409	Dyrk1b	Mirk	dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1b	protein-coding
common_peak2-23057-43-43-0.323131566886405-0.62090566497527	chr14	70442746	70443956	+	0	NA	intron (NM_028560, intron 4 of 6)	intron (NM_028560, intron 4 of 6)	-33901	NM_018781	13655	Mm.103737	NM_018781	ENSMUSG00000033730	Egr3	Pilot	early growth response 3	protein-coding
common_peak1-7976-24-33--0.294252938482622-0.390124689062463	chr1	157411673	157412680	+	0	NA	intron (NM_026683, intron 2 of 3)	intron (NM_026683, intron 2 of 3)	6926	NM_026683	72482	Mm.288249	NM_026683	ENSMUSG00000033701	Acbd6	0610010G04Rik|2610100E10Rik	acyl-Coenzyme A binding domain containing 6	protein-coding
common_peak2-26250-22-27--0.160070816970199-0.317737750275047	chr2	29965074	29966094	+	0	NA	intron (NM_178694, intron 5 of 15)	PB1D9|SINE|Alu	14547	NM_178694	227693	Mm.44526	NM_178694	ENSMUSG00000039686	Zer1	C230075L19Rik|Zyg11bl	zyg-11 related, cell cycle regulator	protein-coding
unique_peak1-265-15-8-0.842239749113344-0.891319708951327	chr1	92799971	92800677	+	0	NA	Intergenic	Intergenic	-11353	NM_053015	171531	Mm.105208	NM_053015	ENSMUSG00000026303	Mlph	2210418F23Rik|5031433I09Rik|AW228792|D1Wsu84e|Slac-2a|l(1)-3Rk|l1Rk3|ln	melanophilin	protein-coding
common_peak2-26070-33-32-0.286943443167075-0.49444889977478	chr2	85098422	85099541	+	0	NA	Intergenic	RMER2|LTR|ERV1	-62125	NM_001033346	241528	Mm.291095	NM_001033346	ENSMUSG00000075224	Lrrc55	A330097E02Rik|Gm351	leucine rich repeat containing 55	protein-coding
unique_peak1-7324-6-1-1.5653981103803-1.56314192529759	chr9	121371385	121371884	+	0	NA	intron (NM_175114, intron 14 of 15)	intron (NM_175114, intron 14 of 15)	33178	NM_001284508	12424	Mm.2619	NM_031161	ENSMUSG00000032532	Cck	-	cholecystokinin	protein-coding
common_peak1-13748-12-4-1.32684789020028-2.04196296489515	chr2	32877341	32877946	+	0	NA	intron (NM_178888, intron 14 of 28)	intron (NM_178888, intron 14 of 28)	-40067	NM_019488	56017	Mm.305754	NM_019488	ENSMUSG00000026791	Slc2a8	D2Ertd44e|GLUT8|GlutX1	solute carrier family 2, (facilitated glucose transporter), member 8	protein-coding
common_peak1-12592-44-62--0.155387088931382-0.346662596190348	chr18	24020331	24021450	+	0	NA	intron (NM_001162941, intron 5 of 7)	intron (NM_001162941, intron 5 of 7)	58419	NM_153058	212307	Mm.132237	NM_153058	ENSMUSG00000024277	Mapre2	AI314113|C820009F03Rik|D18Abb1e|EB1|EB2|RP1	microtubule-associated protein, RP/EB family, member 2	protein-coding
common_peak1-15555-10-12--0.344024373132323-0.340565874754526	chr4	123749414	123750125	+	0	NA	Intergenic	ORR1A2|LTR|MaLR	155093	NM_017475	54170	Mm.220922	NM_017475	ENSMUSG00000028646	Rragc	AU041672|Gtr2|RAGC|TIB929|YGR163W	Ras-related GTP binding C	protein-coding
common_peak2-29659-138-160-0.464753946581773-2.49584126002168	chr6	71543641	71544799	+	0	NA	intron (NM_173001, intron 20 of 25)	intron (NM_173001, intron 20 of 25)	38460	NM_173001	104263	Mm.260479	NM_173001	ENSMUSG00000053470	Kdm3a	1700105C21Rik|C230043E16Rik|JHDM2a|Jmjd1|Jmjd1a|KDM2A|TGSA|Tsga	lysine (K)-specific demethylase 3A	protein-coding
unique_peak2-34267-2-6--1.72480917832092-1.26211192963361	chr13	67108199	67108499	+	0	NA	intron (NR_045851, intron 3 of 8)	intron (NR_045851, intron 3 of 8)	24992	NR_045851	71226	Mm.399574	NR_045851		4933433G19Rik	-	RIKEN cDNA 4933433G19 gene	ncRNA
common_peak2-20324-38-56--0.261437354866211-0.434791164020309	chr10	89685474	89686486	+	0	NA	intron (NM_001128086, intron 9 of 24)	B4A|SINE|B4	349726	NM_001128086	77531	Mm.440605	NM_181398	ENSMUSG00000058589	Anks1b	AIDA-1b|C030032C09Rik|E530015N03Rik|ENSMUSG00000078431|Gm10937|Gm1555	ankyrin repeat and sterile alpha motif domain containing 1B	protein-coding
common_peak2-20448-87-95-0.410674605060013-1.36535318635962	chr10	40257133	40258680	+	0	NA	Intergenic	Intergenic	-32262	NM_027572	70840	Mm.332570	NM_027572	ENSMUSG00000019834	Slc22a16	4921504E14Rik|CT2|FLIPT2|OCT6|OKB1	solute carrier family 22 (organic cation transporter), member 16	protein-coding
common_peak1-19504-13-28--1.0795089644898-1.33403699391683	chrX	164076190	164076795	+	0	NA	intron (NM_001290427, intron 3 of 17)	intron (NM_001290427, intron 3 of 17)	216517	NM_001290428	333605	Mm.426168	NM_001033330	ENSMUSG00000049176	Frmpd4	Gm196|PKAP1|Pdzd10|Pdzk10|Preso1|preso	FERM and PDZ domain containing 4	protein-coding
common_peak1-17939-21-41--0.822828157512525-1.27781945862486	chr7	127406024	127406894	+	0	NA	intron (NM_026458, intron 19 of 30)	intron (NM_026458, intron 19 of 30)	58981	NM_026458	67928	Mm.158178	NM_026458	ENSMUSG00000062017	Abca14	1700110B15Rik|4930539G24Rik	ATP-binding cassette, sub-family A (ABC1), member 14	protein-coding
common_peak1-7875-17-16-0.130833496954699-0.356936432242225	chr1	134060870	134061687	+	0	NA	Intergenic	GA-rich|Low_complexity|Low_complexity	-25016	NM_008795	18557	Mm.28130	NM_008795	ENSMUSG00000026437	Cdk18	AA682070|Ctk18|Pctk3	cyclin-dependent kinase 18	protein-coding
unique_peak2-36403-5-6--0.511735258063458-0.947717972411649	chr2	125624710	125625136	+	0	NA	Intergenic	L1ME2|LINE|L1	-16317	NM_177608	70354	Mm.138091	NM_133725	ENSMUSG00000035093	Secisbp2l	3110001I20Rik|AI504340|C630011I23	SECIS binding protein 2-like	protein-coding
unique_peak2-37216-3-4--0.73591118484664-0.864171920961574	chr4	83417781	83418164	+	0	NA	intron (NM_001081012, intron 23 of 25)	MTD|LTR|MaLR	246523	NM_001081012	320226	Mm.180032	NM_029117	ENSMUSG00000052407	Ccdc171	4930418J05Rik|4930473A06Rik|A330015D16Rik	coiled-coil domain containing 171	protein-coding
common_peak1-11803-38-86--0.871490836550198-2.67345263472825	chr16	57548785	57549872	+	0	NA	promoter-TSS (NM_001177871)	promoter-TSS (NM_001177871)	-27	NM_001177871	78749	Mm.328360	NM_001040397	ENSMUSG00000043336	Filip1l	4631422O05Rik|Doc1	filamin A interacting protein 1-like	protein-coding
unique_peak1-878-10-2-1.77145284428761-2.09384600808989	chr11	31738903	31739458	+	0	NA	Intergenic	Intergenic	-14633	NR_102312	414116	Mm.150222	NR_102310	ENSMUSG00000085772	D630024D03Rik	-	RIKEN cDNA D630024D03 gene	ncRNA
common_peak2-29139-16-11-0.533301141546906-0.58239619684445	chr5	125387616	125388237	+	0	NA	Intergenic	Intergenic	44851	NM_001081750	269704	Mm.138617	NM_001081750	ENSMUSG00000079215	Zfp664	AW060232|D930038J03Rik|ZFOC1|Znf664	zinc finger protein 664	protein-coding
common_peak1-19480-28-24-0.409102930046738-0.610902792227729	chrX	139997676	139998560	+	0	NA	intron (NM_008778, intron 1 of 14)	L3|LINE|CR1	311	NM_008778	18481	Mm.40035	NM_008778	ENSMUSG00000031284	Pak3	PAK-3|Pak65alpha|Pak65beta|Stk4	p21 protein (Cdc42/Rac)-activated kinase 3	protein-coding
common_peak2-25511-9-8-0.0196884049619079-1.03275496310833	chr19	5602158	5602623	+	0	NA	TTS (NM_178637)	TTS (NM_178637)	517	NM_026616	68209	Mm.246200	NM_026616		Rnaseh2c	1500026D16Rik|AYP1	ribonuclease H2, subunit C	protein-coding
unique_peak2-36017-0-6--3.64748585253182-1.56314192529759	chr19	40995723	40996056	+	0	NA	Intergenic	Intergenic	26694	NM_028319	72672	Mm.313523	NM_028319	ENSMUSG00000049164	Zfp518a	2810401C22Rik|6330417C12Rik|AI426493|Zfp518|Znf518|Znf518a|mKIAA0335	zinc finger protein 518A	protein-coding
unique_peak1-6718-9-0-3.18961340640422-3.01029995663981	chr8	40966387	40966890	+	0	NA	Intergenic	L1_Rod|LINE|L1	-238606	NM_001113326	20288	Mm.239291	NM_031195	ENSMUSG00000025044	Msr1	MRS-A|MSR|MSR-A|SR-AI|SR-AII|Scara1|Scvr	macrophage scavenger receptor 1	protein-coding
common_peak1-16945-106-108-0.569582530228793-2.66211045050901	chr6	83914214	83915364	+	0	NA	intron (NM_001166371, intron 15 of 25)	Tigger7|DNA|MER2_type	-43803	NM_001077694	26903	Mm.220982	NM_021469	ENSMUSG00000033788	Dysf	2310004N10Rik|AI604795|D6Pas3	dysferlin	protein-coding
common_peak1-17041-7-6--0.00826409175941478-0.97990265578305	chr6	94225848	94226349	+	0	NA	intron (NM_001286784, intron 1 of 22)	intron (NM_001286784, intron 1 of 22)	7813	NM_001286786	14924	Mm.217216	NM_010367	ENSMUSG00000045095	Magi1	AIP3|BAP1|Baiap1|Gukmi1|MAGI1c|Magi-1|TNRC19|WWP3|mKIAA4129	membrane associated guanylate kinase, WW and PDZ domain containing 1	protein-coding
unique_peak2-39101-14-41--1.49310126242112-3.02568725184407	chr8	78770717	78772050	+	0	NA	Intergenic	Intergenic	652689	NR_028579	100039211	Mm.367571	NR_028579	ENSMUSG00000074235	Gm10649	ENSMUSG00000074235	predicted gene 10649	ncRNA
common_peak2-19996-15-10-0.552733131918359-0.604422558181019	chr1	134097466	134098026	+	0	NA	intron (NM_001033250, intron 1 of 3)	intron (NM_001033250, intron 1 of 3)	3081	NR_029777	723818		NR_029777	miRBase:MI0000646	Mir135b	Mirn135b	microRNA 135b	ncRNA
common_peak1-17976-23-16-0.634304663258741-0.82304638657543	chr7	133115560	133116620	+	0	NA	intron (NM_001101488, intron 2 of 6)	intron (NM_001101488, intron 2 of 6)	109835	NM_001101488	269994	Mm.39599	NM_001101488	ENSMUSG00000046182	Gsg1l	AI852434|C230098I05Rik|G630023A01Rik|Gm637|g1l	GSG1-like	protein-coding
common_peak1-12509-23-22-0.198205548452068-0.373496418836697	chr18	36699431	36700434	+	0	NA	intron (NM_001271544, intron 19 of 21)	PB1|SINE|Alu	12126	NM_001271544	240215	Mm.135463	NM_172830	ENSMUSG00000024485	Slc4a9	AE4|D630003B07|D630024F24Rik	solute carrier family 4, sodium bicarbonate cotransporter, member 9	protein-coding
common_peak1-11157-14-13-0.0918612383000403-0.332077462497413	chr15	75850875	75851649	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-6496	NM_134087	105732	Mm.267178	NM_134087	ENSMUSG00000046761	Fam83h	AA409316	family with sequence similarity 83, member H	protein-coding
common_peak2-22342-42-63--0.257670672132816-0.451511310064814	chr13	23738099	23739496	+	0	NA	Intergenic	MTA_Mm-int|LTR|MaLR	-24370	NM_015787	50709	Mm.170587	NM_015787		Hist1h1e	H1-4|H1e|H1f4|H1s-4|H1var2	histone cluster 1, H1e	protein-coding
common_peak2-27325-20-17-0.318149783148881-0.440610794044987	chr3	67463211	67464205	+	0	NA	Intergenic	Intergenic	77018	NM_025813	66868	Mm.491153	NM_025813	ENSMUSG00000027775	Mfsd1	1200003O06Rik	major facilitator superfamily domain containing 1	protein-coding
unique_peak2-34440-10-9-0.0344872501214071-1.05503135781948	chr14	21453496	21453980	+	0	NA	Intergenic	Intergenic	-16162	NM_030180	78787	Mm.301173	NM_030180	ENSMUSG00000034235	Usp54	4930429G18Rik|AI115571|C030002J06Rik	ubiquitin specific peptidase 54	protein-coding
common_peak2-27648-64-43-1.00601478307131-3.7270384358775	chr3	107964146	107965497	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-7021	NM_175470	229714	Mm.73666	NM_175470	ENSMUSG00000046793	Gpr61	-	G protein-coupled receptor 61	protein-coding
unique_peak2-35499-7-9--0.522837264589173-1.05908390183068	chr17	46609192	46609718	+	0	NA	intron (NM_001162864, intron 10 of 14)	MT2A|LTR|ERVL	15169	NM_001162864	106763	Mm.297613	NM_175351	ENSMUSG00000015599	Ttbk1	AU017937|AW048023|C330008L01Rik	tau tubulin kinase 1	protein-coding
unique_peak1-1062-7-1-1.79909083029819-1.80617997398389	chr11	81447840	81448336	+	0	NA	intron (NM_001034013, intron 1 of 9)	HAL1-3A_ME|LINE|L1	-61047	NM_001033765	237880	Mm.435528	NM_001033765		1700071K01Rik	-	RIKEN cDNA 1700071K01 gene	protein-coding
common_peak1-10688-15-17--0.157760250886656-0.307611222530528	chr14	54883508	54884152	+	0	NA	intron (NM_001205181, intron 4 of 6)	intron (NM_001205181, intron 4 of 6)	4923	NM_134076	105501	Mm.28771	NM_134076	ENSMUSG00000040997	Abhd4	1110035H23Rik|AI429574|Abh4	abhydrolase domain containing 4	protein-coding
common_peak1-13389-45-21-1.40092640670757-4.21528825723629	chr19	46978922	46980435	+	0	NA	intron (NM_029810, intron 3 of 17)	intron (NM_029810, intron 3 of 17)	57163	NM_029810	76952	Mm.40965	NM_029810	ENSMUSG00000025041	Nt5c2	2010002I23Rik|CnII|ENSMUSG00000025039|Gm9751|Gmp|Nt5b|Pnt5|cN-II	5'-nucleotidase, cytosolic II	protein-coding
common_peak2-31134-91-164--0.292890268643478-0.912763216838052	chr8	34807348	34810555	+	0	NA	TTS (NM_010344)	TTS (NM_010344)	-33435	NM_001167921	68153	Mm.286104	NM_026584	ENSMUSG00000031585	Gtf2e2	34kDa|AI462509|C330006J08Rik	general transcription factor II E, polypeptide 2 (beta subunit)	protein-coding
common_peak1-12720-11-12--0.191746133889479-0.310474156842889	chr18	50128394	50129089	+	0	NA	Intergenic	Intergenic	-10340	NM_001177760	106869	Mm.27740	NM_134131	ENSMUSG00000062210	Tnfaip8	AA987150|E130304C20Rik|ENSMUSG00000073567|Gg2-1|Gm10539|Nded|Ssc-2	tumor necrosis factor, alpha-induced protein 8	protein-coding
common_peak1-10444-11-8-0.338768582809301-1.14218153353838	chr13	104108999	104109556	+	0	NA	intron (NM_175171, intron 1 of 28)	intron (NM_175171, intron 1 of 28)	15295	NM_175171	328329	Mm.202606	NM_175171	ENSMUSG00000034751	Mast4	4930420O11Rik|AI642422|mKIAA0303	microtubule associated serine/threonine kinase family member 4	protein-coding
unique_peak1-6164-9-2-1.60465090568306-1.87199725847353	chr6	140548868	140549340	+	0	NA	Intergenic	RLTR42-int|LTR|ERVK	-22080	NM_178803	11569	Mm.86453	NM_009637	ENSMUSG00000030232	Aebp2	AU023766|B230313N05Rik	AE binding protein 2	protein-coding
common_peak2-23051-13-15--0.221527969362231-0.308519316180257	chr14	70159945	70160599	+	0	NA	Intergenic	Intergenic	-7007	NM_020275	21933	Mm.193430	NM_020275	ENSMUSG00000022074	Tnfrsf10b	DR5|KILLER|Ly98|MK|TRAILR2|TRICK2A|TRICK2B|TRICKB	tumor necrosis factor receptor superfamily, member 10b	protein-coding
unique_peak2-36883-2-11--2.50241675698448-2.32232533660526	chr3	95227178	95227747	+	0	NA	Intergenic	IAPEY3-int|LTR|ERVK	-3809	NR_033637	100043305	Mm.412052	NR_033637		Gm4349	-	SET domain, bifurcated 1 pseudogene	pseudo
common_peak1-14300-17-19--0.103631756682325-0.301029995663974	chr2	158523335	158523963	+	0	NA	intron (NM_153089, intron 2 of 10)	MIRb|SINE|MIR	30778	NM_001159662	228852	Mm.150540	NM_153089	ENSMUSG00000037754	Ppp1r16b	ANKRD4|C130078N17Rik|TIMAP|Wdt4	protein phosphatase 1, regulatory (inhibitor) subunit 16B	protein-coding
common_peak1-15468-55-79--0.117308223734661-0.336517889197633	chr4	106847291	106848988	+	0	NA	intron (NM_025617, intron 2 of 4)	intron (NM_025617, intron 2 of 4)	2832	NM_025617	66526	Mm.246956	NM_025617	ENSMUSG00000028619	Tceanc2	2210010B22Rik|2210012G02Rik|6330404A07Rik|AU015593|Tdeanc2	transcription elongation factor A (SII) N-terminal and central domain containing 2	protein-coding
common_peak2-20886-57-82--0.109006391267996-0.335178273031072	chr11	3392104	3394058	+	0	NA	exon (NM_172791, exon 7 of 7)	exon (NM_172791, exon 7 of 7)	4851	NM_172791	237625	Mm.100476	NM_172791	ENSMUSG00000034579	Pla2g3	-	phospholipase A2, group III	protein-coding
common_peak1-15289-24-19-0.471281807880354-0.677583764578261	chr4	41314125	41314935	+	0	NA	intron (NM_001290454, intron 2 of 5)	B2_Mm2|SINE|B2	18501	NM_023305	67123	Mm.289795	NM_023305	ENSMUSG00000028437	Ubap1	2700092A01Rik|NAG20|UBAP-1|Ubap	ubiquitin-associated protein 1	protein-coding
unique_peak2-39861-2-6--1.72480917832092-1.26211192963361	chrX	73469410	73469763	+	0	NA	Intergenic	Intergenic	-40059	NM_001013760	238829	Mm.292319	NM_001013760	ENSMUSG00000071738	Gm4937	EG238829	predicted gene 4937	protein-coding
common_peak2-31185-19-28--0.455293668465885-0.518921928796332	chr8	47931946	47933299	+	0	NA	3' UTR (NM_008391, exon 9 of 9)	3' UTR (NM_008391, exon 9 of 9)	107523	NM_008391	16363	Mm.1149	NM_008391	ENSMUSG00000031627	Irf2	9830146E22Rik|AI646973|Irf-2	interferon regulatory factor 2	protein-coding
unique_peak2-35153-13-23--0.806490470083387-0.781208772652439	chr16	32867434	32868484	+	0	NA	intron (NM_001200038, intron 1 of 19)	intron (NM_001200038, intron 1 of 19)	493	NM_001200038	100502698	Mm.327319	NM_172615	ENSMUSG00000035629	1700021K19Rik	5330403K09|Kiaa0226|Rubicon|mKIAA0226	RIKEN cDNA 1700021K19 gene	protein-coding
unique_peak1-7351-16-0-4.11826364226806-5.41853992195166	chrX	13292828	13293584	+	0	NA	intron (NM_001284503, intron 2 of 26)	intron (NM_001284503, intron 2 of 26)	54717	NM_175669	319200	Mm.383294	NM_175669	ENSMUSG00000047678	Gpr82	-	G protein-coupled receptor 82	protein-coding
unique_peak1-4693-17-9-0.896368243317676-1.09394599973099	chr3	97151044	97151868	+	0	NA	Intergenic	B1_Mur4|SINE|Alu	63646	NM_146275	258272	Mm.377406	NM_146275	ENSMUSG00000051392	Olfr1402	MOR217-1	olfactory receptor 1402	protein-coding
common_peak2-29363-9-6-0.382258484346616-1.11707584880836	chr5	151155032	151155444	+	0	NA	intron (NM_172887, intron 7 of 60)	RLTR11A|LTR|ERVK	92733	NM_172887	320365	Mm.216590	NM_172887	ENSMUSG00000056602	Fry	13CDNA73|9330186A19Rik|AF346502|AI462658|C87180|D930046M03|cg003|mKIAA4143	furry homolog (Drosophila)	protein-coding
unique_peak2-34339-4-7--1.02346051385325-1.09384600808989	chr13	98692269	98692673	+	0	NA	intron (NM_012026, intron 35 of 35)	MER58B|DNA|MER1_type	283649	NM_012026	110596	Mm.252718	NM_012026	ENSMUSG00000021662	Arhgef28	9230110L08Rik|AI323540|D13Bwg1089e|RIP2|Rgnef|RhoGEF|Rhoip2|p190RhoGEF	Rho guanine nucleotide exchange factor (GEF) 28	protein-coding
common_peak1-16570-8-14--0.901668177660948-0.660903317613906	chr5	146690998	146691512	+	0	NA	intron (NM_007818, intron 1 of 12)	intron (NM_007818, intron 1 of 12)	175	NM_007818	13112	Mm.332844	NM_007818	ENSMUSG00000056035	Cyp3a11	AI256190|Cyp3a|IIIAm1|Pcn	cytochrome P450, family 3, subfamily a, polypeptide 11	protein-coding
unique_peak2-37376-6-12--1.13504160776079-1.45089835786865	chr4	138217297	138217841	+	0	NA	Intergenic	Intergenic	-37662	NM_029401	75718	Mm.251530	NM_029401		Vwa5b1	4931403E03Rik	von Willebrand factor A domain containing 5B1	protein-coding
common_peak2-26104-18-19--0.00900894365901106-0.306598483909153	chr2	3748247	3749059	+	0	NA	Intergenic	ORR1A4-int|LTR|MaLR	117923	NM_025626	66540	Mm.277864	NM_025626	ENSMUSG00000026655	Fam107b	3110001A13Rik|AA589595|AA959793|AI132312	family with sequence similarity 107, member B	protein-coding
common_peak2-28705-22-17-0.477359103645092-0.633951497070961	chr5	34549498	34550177	+	0	NA	intron (NM_001015039, intron 8 of 12)	intron (NM_001015039, intron 8 of 12)	-19478	NM_010753	17122	Mm.259260	NM_010753	ENSMUSG00000037235	Mxd4	2810410A03Rik|Mad4|bHLHc12	Max dimerization protein 4	protein-coding
common_peak2-23495-76-91-0.238382429806268-0.653284972411461	chr15	76080154	76081595	+	0	NA	TTS (NM_023168)	TTS (NM_023168)	2253	NR_105918	102465575		NR_105918		Mir6953	mmu-mir-6953	microRNA mir-6953	ncRNA
common_peak1-15545-16-21--0.341167976369236-0.392630012299441	chr4	120571299	120571998	+	0	NA	Intergenic	ORR1B1|LTR|MaLR	21174	NM_182929	242662	Mm.192502	NM_182929	ENSMUSG00000032890	Rims3	A730060M23Rik|Nim3|Rim3|mKIAA0237	regulating synaptic membrane exocytosis 3	protein-coding
unique_peak1-7395-12-5-1.06381348436648-1.78669045979184	chrX	103621792	103622411	+	0	NA	intron (NM_001007580, intron 22 of 26)	L1MD1|LINE|L1	58467	NM_001007580	333564	Mm.298000	NM_001007580	ENSMUSG00000033737	Fndc3c1	Fndc3c|Gm784	fibronectin type III domain containing 3C1	protein-coding
common_peak1-9881-24-19-0.471281807880354-0.677583764578261	chr12	84416987	84417849	+	0	NA	intron (NM_001267625, intron 5 of 10)	intron (NM_001267625, intron 5 of 10)	-377276	NR_046045	74283	Mm.398247	NR_046045		1700085C21Rik	-	RIKEN cDNA 1700085C21 gene	ncRNA
common_peak2-27034-15-16--0.075298090694683-0.301029995663976	chr2	180033353	180034138	+	0	NA	Intergenic	RLTR16|LTR|ERVK	-9161	NM_173031	271887	Mm.246640	NM_173031	ENSMUSG00000038980	Rbbp8nl	4732416F18	RBBP8 N-terminal like	protein-coding
common_peak2-22348-14-26--0.855671341805824-0.949797625454538	chr13	23760615	23761485	+	0	NA	Intergenic	RMER5|LTR|ERV1	14778	NM_178189	319164	Mm.261973	NM_178189	ENSMUSG00000069270	Hist1h2ac	-	histone cluster 1, H2ac	protein-coding
unique_peak1-2201-7-2-1.21412832957703-1.45399745587252	chr15	66932175	66932669	+	0	NA	Intergenic	Intergenic	76022	NM_009177	20442	Mm.248334	NM_009177	ENSMUSG00000013846	St3gal1	5330418N22Rik|AI467004|ST3GalI|Siat4|Siat4a|St3gal-1	ST3 beta-galactoside alpha-2,3-sialyltransferase 1	protein-coding
common_peak2-20752-14-36--1.31023720527131-2.23573970698982	chr10	111619047	111619943	+	0	NA	exon (NM_178278, exon 6 of 17)	exon (NM_178278, exon 6 of 17)	16763	NM_178278	353025	Mm.194428	NM_178278	ENSMUSG00000035694	Caps2	D630005B03Rik	calcyphosphine 2	protein-coding
common_peak2-30187-22-26--0.107603397076064-0.30528805757448	chr7	24460902	24461741	+	0	NA	Intergenic	Intergenic	17986	NM_030735	81010	Mm.379267	NM_030735	ENSMUSG00000035523	Vmn1r172	V1rd9|V3R9	vomeronasal 1 receptor 172	protein-coding
unique_peak1-3108-26-14-1.02100849654994-1.59386218057211	chr18	31788353	31789674	+	0	NA	Intergenic	Intergenic	-5024	NM_172965	269003	Mm.194538	NM_172965	ENSMUSG00000024260	Sap130	2610304F09Rik|6720406D06	Sin3A associated protein	protein-coding
common_peak1-17033-27-9-1.66961785600787-3.27210358356897	chr6	91736203	91737143	+	0	NA	intron (NM_001159507, intron 4 of 23)	intron (NM_001159507, intron 4 of 23)	20714	NM_001159507	243547	Mm.333264	NM_001033353	ENSMUSG00000030098	Grip2	-	glutamate receptor interacting protein 2	protein-coding
common_peak1-19436-15-23--0.5727977501655-0.575340103425218	chrX	94177651	94178378	+	0	NA	Intergenic	Lx9|LINE|L1	-89921	NM_001033361	245526	Mm.336164	NM_001033361	ENSMUSG00000031212	Pgr15l	-	G protein-coupled receptor 15-like	protein-coding
common_peak2-32089-9-8-0.0196884049619079-1.03275496310833	chr9	96863307	96863789	+	0	NA	intron (NM_145134, intron 2 of 2)	intron (NM_145134, intron 2 of 2)	55226	NM_145134	211949	Mm.491271	NM_145134	ENSMUSG00000046997	Spsb4	D030068E18Rik|SSB-4|Ssb4	splA/ryanodine receptor domain and SOCS box containing 4	protein-coding
unique_peak2-38326-8-8--0.164702583494742-1.00793137938329	chr6	147199485	147199955	+	0	NA	TTS (NM_008970)	TTS (NM_008970)	12887	NM_008970	19227	Mm.28440	NM_008970	ENSMUSG00000048776	Pthlh	PTH-like|Pthrp	parathyroid hormone-like peptide	protein-coding
unique_peak2-38125-3-7--1.41398308995928-1.23214870625617	chr6	83078222	83078652	+	0	NA	Intergenic	Intergenic	-3414	NM_023547	70020	Mm.27814	NM_023547	ENSMUSG00000030034	Ino80b	2510009I23Rik|HMG1YL4|Hmga1l4|Papa1|Znhit4	INO80 complex subunit B	protein-coding
common_peak2-27327-107-270--0.728102108680475-5.98011290815128	chr3	68491822	68494205	+	0	NA	Intergenic	ID_B1|SINE|B4	-1553	NM_001159424	16159	Mm.103783	NM_008351	ENSMUSG00000027776	Il12a	IL-12p35|Il-12a|Ll12a|p35	interleukin 12a	protein-coding
unique_peak2-32671-1-11--3.2120195109379-2.83420869758413	chr1	135820221	135820684	+	0	NA	Intergenic	Intergenic	-2474	NM_054077	116847	Mm.214514	NM_054077	ENSMUSG00000041577	Prelp	7330409J17Rik|SLRR2A	proline arginine-rich end leucine-rich repeat	protein-coding
common_peak2-28763-7-9--0.522837264589173-1.05908390183068	chr5	45137112	45137559	+	0	NA	intron (NM_001286348, intron 1 of 8)	intron (NM_001286348, intron 1 of 8)	53650	NM_010698	16826	Mm.25785	NM_010698	ENSMUSG00000039706	Ldb2	AI035351|AW146358|CLIM1|CLP-36|Ldb3	LIM domain binding 2	protein-coding
unique_peak2-34809-5-10--1.16381195464315-1.33892459842472	chr15	73512558	73513053	+	0	NA	Intergenic	Intergenic	25130	NM_173365	239530	Mm.122997	NM_173365	ENSMUSG00000045281	Gpr20	A430106B11Rik	G protein-coupled receptor 20	protein-coding
common_peak2-31036-11-19--0.813234510635749-0.769930178837768	chr8	13676935	13677648	+	0	NA	intron (NM_009025, intron 1 of 23)	CpG	296	NM_009025	19414	Mm.18517	NM_009025	ENSMUSG00000031453	Rasa3	AI326412|C86362|E130011G04|GAPIII|scat	RAS p21 protein activator 3	protein-coding
common_peak2-32219-13-13--0.0288828914198356-0.309074325783021	chr9	122104200	122104582	+	0	NA	intron (NM_001271873, intron 12 of 12)	MLT1F|LTR|MaLR	78007	NM_133741	20623	Mm.257989	NM_133741	ENSMUSG00000038145	Snrk	2010012F07Rik|AI448042|AW547029|E030034B15|R74830|mKIAA0096	SNF related kinase	protein-coding
unique_peak2-34002-4-19--2.34538860874061-2.60953805094651	chr12	98746946	98747671	+	0	NA	Intergenic	Intergenic	750239	NM_008079	14420	Mm.5120	NM_008079	ENSMUSG00000021003	Galc	2310068B06Rik|A930008M05Rik|AW212969|AW413532|Gacy|twi|twitcher	galactosylceramidase	protein-coding
common_peak1-14593-67-101--0.1280138591885-0.372686515575375	chr3	51276343	51278108	+	0	NA	3' UTR (NM_053089, exon 20 of 20)	3' UTR (NM_053089, exon 20 of 20)	-10663	NM_016858	19338	Mm.1664	NM_016858	ENSMUSG00000027739	Rab33b	-	RAB33B, member RAS oncogene family	protein-coding
unique_peak1-3761-9-2-1.60465090568306-1.87199725847353	chr19	54984224	54984686	+	0	NA	Intergenic	Intergenic	189482	NM_008149	14732	Mm.210196	NM_008149	ENSMUSG00000024978	Gpam	GPAT|GPAT1	glycerol-3-phosphate acyltransferase, mitochondrial	protein-coding
common_peak1-8846-26-65--1.11649502719999-3.16814290467713	chr11	30266869	30268109	+	0	NA	Intergenic	Intergenic	104340	NM_001100394	75087	Mm.159422	NM_001100394	ENSMUSG00000040919	4930505A04Rik	-	RIKEN cDNA 4930505A04 gene	protein-coding
unique_peak1-2227-16-1-3.11826364226806-4.46429741251234	chr15	74988013	74988761	+	0	NA	Intergenic	Intergenic	-46008	NM_001099217	100041546	Mm.482110	NM_001099217	ENSMUSG00000022584	Ly6c2	Ly-6C.2|Ly-6C2	lymphocyte antigen 6 complex, locus C2	protein-coding
common_peak2-31142-17-36--0.991157027423912-1.46094028072561	chr8	36247904	36249270	+	0	NA	Intergenic	Intergenic	-190208	NM_177741	244416	Mm.247126	NM_177741	ENSMUSG00000046794	Ppp1r3b	6430576E21|AW821953|GL|PTG	protein phosphatase 1, regulatory (inhibitor) subunit 3B	protein-coding
common_peak2-24919-11-7-0.508693584251613-1.21681515183528	chr17	87170707	87171171	+	0	NA	intron (NM_010137, intron 1 of 15)	intron (NM_010137, intron 1 of 15)	17735	NM_010137	13819	Mm.1415	NM_010137	ENSMUSG00000024140	Epas1	HIF-2alpha|HIF2A|HLF|HRF|MOP2|bHLHe73	endothelial PAS domain protein 1	protein-coding
common_peak1-11505-23-16-0.634304663258741-0.82304638657543	chr16	4472564	4473558	+	0	NA	Intergenic	Intergenic	49992	NM_175347	106393	Mm.35811	NM_175347	ENSMUSG00000022519	Srl	9830004M20Rik|AW108387|sar	sarcalumenin	protein-coding
unique_peak1-930-13-5-1.19350952991661-1.95509489018123	chr11	52338052	52338758	+	0	NA	Intergenic	(TATG)n|Simple_repeat|Simple_repeat	128475	NM_153117	213673	Mm.291979	NM_153117	ENSMUSG00000036275	9530068E07Rik	C85061|Kct2	RIKEN cDNA 9530068E07 gene	protein-coding
common_peak2-30863-2-9--2.23938235115068-1.87199725847353	chr7	139274189	139274491	+	0	NA	intron (NM_018867, intron 4 of 13)	intron (NM_018867, intron 4 of 13)	72084	NM_018867	55987	Mm.471654	NM_018867	ENSMUSG00000030862	Cpxm2	4632435C11Rik|CPX-2|Cpx2	carboxypeptidase X 2 (M14 family)	protein-coding
common_peak1-17602-12-14--0.25811461052088-0.309074325783021	chr7	44892269	44892913	+	0	NA	Intergenic	Intergenic	1627313	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak2-28134-40-52--0.0689447718121006-0.303138254425616	chr4	97777971	97779010	+	0	NA	3' UTR (NM_001122953, exon 10 of 10)	3' UTR (NM_001122953, exon 10 of 10)	271466	NM_053157	94043	Mm.331719	NM_053157	ENSMUSG00000028563	Tm2d1	2310026L18Rik|AA990549|Bbp	TM2 domain containing 1	protein-coding
common_peak1-15411-22-16-0.559821263837065-0.733541631673787	chr4	86689264	86690167	+	0	NA	intron (NM_001110240, intron 4 of 9)	intron (NM_001110240, intron 4 of 9)	169397	NM_139306	230379	Mm.45019	NM_139306	ENSMUSG00000038007	Acer2	2410116I05Rik|Asah3l|CRG-L1|maCER2	alkaline ceramidase 2	protein-coding
common_peak1-15809-33-32-0.286943443167075-0.49444889977478	chr5	33651946	33652975	+	0	NA	Intergenic	RLTR14-int|LTR|ERV1	-25761	NM_021500	59003	Mm.281642	NM_021500	ENSMUSG00000079562	Maea	1110030D19Rik|EMP|Gid9	macrophage erythroblast attacher	protein-coding
unique_peak2-36922-2-7--1.91745425626332-1.45399745587252	chr3	101107344	101107736	+	0	NA	Intergenic	Intergenic	-15678	NM_013486	12481	Mm.22842	NM_013486	ENSMUSG00000027863	Cd2	LFA-2|Ly-37|Ly37	CD2 antigen	protein-coding
unique_peak1-6787-14-2-2.31425365963649-3.28500101358144	chr8	68740288	68741027	+	0	NA	intron (NM_001293784, intron 4 of 8)	(GA)n|Simple_repeat|Simple_repeat	-169543	NM_001166375	72925	Mm.380457	NM_175188	ENSMUSG00000036469	March1	2900024D24Rik|BB085186	membrane-associated ring finger (C3HC4) 1	protein-coding
unique_peak1-4313-7-2-1.21412832957703-1.45399745587252	chr2	150662188	150662626	+	0	NA	intron (NM_024465, intron 10 of 12)	intron (NM_024465, intron 10 of 12)	49875	NM_153781	110078	Mm.222584	NM_153781	ENSMUSG00000033059	Pygb	-	brain glycogen phosphorylase	protein-coding
unique_peak2-36692-1-6--2.43441193227435-1.56314192529759	chr3	35755543	35755873	+	0	NA	TTS (NM_029570)	TTS (NM_029570)	73288	NM_033623	114893	Mm.374810	NM_033623	ENSMUSG00000027708	Dcun1d1	Rp42|SCCRO|Tes3|pTes3	DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae)	protein-coding
common_peak1-15834-58-57-0.437968939762925-1.07722485289274	chr5	137509918	137511219	+	0	NA	TTS (NM_007457)	TTS (NM_007457)	4403	NM_001039385	381677	Mm.389697	NM_001039385	ENSMUSG00000037428	Vgf	Gm1052	VGF nerve growth factor inducible	protein-coding
common_peak2-27849-20-16-0.400611943340854-0.507611860039817	chr3	152395225	152395916	+	0	NA	intron (NM_025662, intron 3 of 10)	intron (NM_025662, intron 3 of 10)	18506	NM_025662	329777	Mm.331447	NM_025662	ENSMUSG00000039047	Pigk	3000001O05Rik	phosphatidylinositol glycan anchor biosynthesis, class K	protein-coding
common_peak1-8814-43-56--0.0503268286410385-0.302986303577564	chr11	21370347	21371598	+	0	NA	Intergenic	MURVY-int|LTR|ERV1	40211	NR_028259	237694	Mm.72926	NM_172792	ENSMUSG00000078962	4932414J04Rik	-	RIKEN cDNA 4932414J04 gene	ncRNA
common_peak2-26565-10-13--0.450939577048835-0.386243247519795	chr2	103073629	103074219	+	0	NA	Intergenic	L1MEc|LINE|L1	69429	NM_007914	13661	Mm.10724	NM_007914	ENSMUSG00000012350	Ehf	9030625L19Rik|AU019492	ets homologous factor	protein-coding
common_peak1-13422-24-15-0.793209902767717-1.16796998271032	chr19	53555618	53556300	+	0	NA	Intergenic	B4A|SINE|B4	-16673	NR_028427	381232	Mm.248624	NR_028427	ENSMUSG00000097636	5830416P10Rik	4833407H14Rik|5430437C04Rik|ENSMUSG00000074788|Gm10758	RIKEN cDNA 5830416P10 gene	ncRNA
common_peak1-13786-26-28-0.0699180970308904-0.316008636696532	chr2	38511458	38512159	+	0	NA	Intergenic	Intergenic	-12382	NM_011187	19177	Mm.389251	NM_011187	ENSMUSG00000026750	Psmb7	AU020723|MC14	proteasome (prosome, macropain) subunit, beta type 7	protein-coding
common_peak1-16497-18-9-0.990991056340989-1.23014042908325	chr5	139173750	139174407	+	0	NA	Intergenic	RMER17C|LTR|ERVK	-56957	NM_030565	80752	Mm.320355	NM_030565	ENSMUSG00000025854	Fam20c	C76981|DMP-4|DMP4|GEF-CK|mKIAA4081	family with sequence similarity 20, member C	protein-coding
unique_peak1-4282-12-0-3.64877598508764-4.21441993929574	chr2	138277996	138278517	+	0	NA	Intergenic	RMER1C|Other|Other	174027	NM_145534	228662	Mm.153405	NM_145534	ENSMUSG00000062098	Btbd3	mKIAA0952	BTB (POZ) domain containing 3	protein-coding
unique_peak1-1066-11-0-3.50869358425161-3.61235994796777	chr11	83534221	83535003	+	0	NA	Intergenic	Intergenic	12106	NM_007969	14038	Mm.1650	NM_007969	ENSMUSG00000000983	Wfdc18	Expi|Kal1|WDNM1	WAP four-disulfide core domain 18	protein-coding
common_peak1-17654-11-10-0.0492619656143161-0.31137425193576	chr7	60244166	60244731	+	0	NA	Intergenic	Intergenic	902811	NR_105746	102466619		NR_105746	miRBase:MI0021585	Mir6238	mmu-mir-6238	microRNA mir-6238	ncRNA
common_peak1-9994-32-48--0.335617824895548-0.503563708672202	chr13	63814780	63815696	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-101390	NM_001013608	76251	Mm.186610	NM_023507	ENSMUSG00000021470	Ercc6l2	0610007P08Rik|1700019D06Rik|9330134C04Rik|Rad26l|Sr278	excision repair cross-complementing rodent repair deficiency, complementation group 6 like 2	protein-coding
common_peak1-9052-15-18--0.235762762887929-0.326591483156968	chr11	68313458	68314122	+	0	NA	Intergenic	Intergenic	-2731	NM_001004435	104709	Mm.234573	NM_001004435	ENSMUSG00000046207	Pik3r6	BB220380|p84|p84 PIKAP|p87(PIKAP)|p87PIKAP	phosphoinositide-3-kinase, regulatory subunit 6	protein-coding
common_peak2-30519-10-11--0.228547155712387-0.31137425193576	chr7	66109965	66110426	+	0	NA	Intergenic	Intergenic	196623	NM_009728	11982	Mm.135129	NM_009728	ENSMUSG00000025324	Atp10a	Atp10c|pfatp	ATPase, class V, type 10A	protein-coding
common_peak1-18349-55-76--0.062166669542199-0.306820760341408	chr8	69716056	69717286	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	-297986	NM_008673	17960	Mm.14125	NM_008673	ENSMUSG00000025588	Nat1	Nat-1	N-acetyl transferase 1	protein-coding
common_peak1-9383-17-15-0.218296338205038-0.403453972741633	chr11	98809749	98810491	+	0	NA	intron (NM_001177302, intron 2 of 9)	B4A|SINE|B4	9095	NM_001177303	19401	Mm.439744	NM_009024	ENSMUSG00000037992	Rara	Nr1b1|RAR|RARalpha1	retinoic acid receptor, alpha	protein-coding
unique_peak1-5495-8-1-2.00522241794757-2.05605744720049	chr5	135681633	135682107	+	0	NA	intron (NM_011714, intron 4 of 18)	intron (NM_011714, intron 4 of 18)	18677	NM_011714	22385	Mm.40331	NM_011714	ENSMUSG00000002748	Baz1b	C87820|WSTF|Wbscr9	bromodomain adjacent to zinc finger domain, 1B	protein-coding
common_peak2-30115-49-75--0.241643690418401-0.490255246984408	chr6	136803763	136804542	+	0	NA	intron (NM_026639, intron 1 of 2)	B4A|SINE|B4	1969	NM_026639	109978	Mm.31840	NM_026639	ENSMUSG00000030217	Art4	4432404K01Rik|ARTC4|DO|DOK1	ADP-ribosyltransferase 4	protein-coding
common_peak2-29054-11-15--0.491306415748387-0.435191258261915	chr5	115572944	115573740	+	0	NA	3' UTR (NM_175352, exon 5 of 5)	3' UTR (NM_175352, exon 5 of 5)	-3987	NM_007383	11409	Mm.18759	NM_007383	ENSMUSG00000029545	Acads	AI196007|Bcd-1|Bcd1|Hdlq8|SCAD	acyl-Coenzyme A dehydrogenase, short chain	protein-coding
unique_peak2-36038-4-8--1.19338551529556-1.21878474469819	chr19	44069314	44069786	+	0	NA	Intergenic	Intergenic	-8540	NM_030703	93721	Mm.206774	NM_030703	ENSMUSG00000025196	Cpn1	0610011F20Rik|CPN	carboxypeptidase N, polypeptide 1	protein-coding
unique_peak2-33896-7-10--0.660340788339108-1.12966497611638	chr12	51348305	51348690	+	0	NA	Intergenic	L1Md_A|LINE|L1	401713	NM_008858	18760	Mm.133719	NM_008858	ENSMUSG00000002688	Prkd1	PKD|PKD1|Pkcm|Prkcm	protein kinase D1	protein-coding
common_peak2-26242-10-19--0.965512749878593-0.917676348953458	chr2	29125044	29125738	+	0	NA	Intergenic	Lx|LINE|L1	-16878	NR_029460	76220	Mm.330108	NR_029460		6530402F18Rik	mKIAA1857	RIKEN cDNA 6530402F18 gene	ncRNA
common_peak1-17420-15-19--0.309763344331706-0.356936432242222	chr7	12421951	12422778	+	0	NA	Intergenic	Intergenic	-9760	NM_134206	171240	Mm.377196	NM_134206	ENSMUSG00000047655	Vmn1r74	V1rg5	vomeronasal 1 receptor 74	protein-coding
unique_peak2-35263-7-14--1.10779976531033-0.817533494790411	chr17	46874425	46874943	+	0	NA	exon (NM_028065, exon 4 of 6)	exon (NM_028065, exon 4 of 6)	-8570	NM_010321	14711	Mm.29395	NM_010321	ENSMUSG00000002769	Gnmt	-	glycine N-methyltransferase	protein-coding
common_peak1-10168-15-22--0.511397205501357-0.50761186003982	chr13	38311151	38311948	+	0	NA	intron (NM_026382, intron 6 of 8)	intron (NM_026382, intron 6 of 8)	14741	NM_026382	67797	Mm.250783	NM_026382	ENSMUSG00000021431	Snrnp48	1110050F08Rik|6530403A03Rik|C6orf151	small nuclear ribonucleoprotein 48 (U11/U12)	protein-coding
common_peak1-15552-13-18--0.469455482805817-0.409888142029227	chr4	123422365	123423094	+	0	NA	intron (NM_023423, intron 1 of 4)	B1F|SINE|Alu	4813	NM_023423	68050	Mm.27903	NM_023423		Akirin1	6330407G11Rik	akirin 1	protein-coding
common_peak1-13084-25-32--0.182544214013348-0.333081040816759	chr19	6975027	6975690	+	0	NA	Intergenic	Intergenic	8777	NM_012021	54683	Mm.279782	NM_012021		Prdx5	AOEB166|AOPP|Pmp20|Prdx6|PrxV	peroxiredoxin 5	protein-coding
common_peak1-14686-53-91--0.382588943641085-0.838566397596579	chr3	65527640	65529611	+	0	NA	intron (NM_001166659, intron 3 of 12)	B1F1|SINE|Alu	58475	NM_001166659	624866	Mm.296317	NM_001037923	ENSMUSG00000074579	Lekr1	EG546798|EG624866|Gm6534	leucine, glutamate and lysine rich 1	protein-coding
common_peak1-11219-63-140--0.701238761328204-3.01306940132187	chr15	79108182	79109711	+	0	NA	intron (NM_177580, intron 4 of 13)	B3|SINE|B2	6993	NM_177580	207495	Mm.309647	NM_177580	ENSMUSG00000018126	Baiap2l2	BC048937	BAI1-associated protein 2-like 2	protein-coding
common_peak1-8389-23-39--0.600160590378282-0.869438253311888	chr10	63243895	63244699	+	0	NA	intron (NM_001164376, intron 5 of 17)	L1Md_F2|LINE|L1	-39506	NM_001164519	216033	Mm.444692	NM_177612	ENSMUSG00000060843	Ctnna3	4930429L08Rik|4933408A16|Catna3|Vr22	catenin (cadherin associated protein), alpha 3	protein-coding
common_peak1-16511-28-16-0.965496278571123-1.60877160026697	chr5	140320963	140322213	+	0	NA	Intergenic	Intergenic	-18791	NM_025604	66506	Mm.29070	NM_025604	ENSMUSG00000029551	Psmg3	1810042K04Rik|4930403H09Rik|AI303239	proteasome (prosome, macropain) assembly chaperone 3	protein-coding
common_peak2-22392-38-53--0.183434842864938-0.354801288549198	chr13	32926223	32927314	+	0	NA	Intergenic	Intergenic	16286	NM_025429	66222	Mm.20144	NM_025429	ENSMUSG00000044734	Serpinb1a	1190005M04Rik|AI325983|EI|EIA|ELANH2|LEI|M/NEI|MNEI|PI2	serine (or cysteine) peptidase inhibitor, clade B, member 1a	protein-coding
common_peak2-19603-23-28--0.136213490618491-0.317118655902079	chr1	33757227	33758067	+	0	NA	Intergenic	URR1A|DNA|MER1_type	-19094	NM_008999	19335	Mm.86744	NM_008999	ENSMUSG00000004768	Rab23	AW545388|opb|opb2	RAB23, member RAS oncogene family	protein-coding
common_peak2-30825-8-10--0.454209200689727-1.078512453669	chr7	130574797	130575275	+	0	NA	Intergenic	Intergenic	-30772	NM_007474	11833	Mm.273175	NM_007474	ENSMUSG00000030762	Aqp8	AI255744|AQP-8	aquaporin 8	protein-coding
unique_peak2-37761-2-6--1.72480917832092-1.26211192963361	chr5	114773788	114774187	+	0	NA	intron (NM_001164573, intron 5 of 30)	intron (NM_001164573, intron 5 of 30)	9037	NM_001164573	231646	Mm.238285	NM_146163	ENSMUSG00000066952	Myo1h	4631401O15Rik	myosin 1H	protein-coding
common_peak2-26435-28-55--0.754395802236141-1.50810240303318	chr2	66123850	66125252	+	0	NA	intron (NM_018733, intron 23 of 26)	PB1D10|SINE|Alu	-29877	NM_001290669	73668	Mm.250868	NM_001047604	ENSMUSG00000034848	Ttc21b	2410066K11Rik|Thm1|aln|mKIAA1992	tetratricopeptide repeat domain 21B	protein-coding
unique_peak2-38774-7-14--1.10779976531033-0.817533494790411	chr7	127393831	127394420	+	0	NA	intron (NM_026458, intron 15 of 30)	intron (NM_026458, intron 15 of 30)	46647	NM_026458	67928	Mm.158178	NM_026458	ENSMUSG00000062017	Abca14	1700110B15Rik|4930539G24Rik	ATP-binding cassette, sub-family A (ABC1), member 14	protein-coding
unique_peak1-3362-26-11-1.34293659143731-2.2880788707084	chr19	46989282	46990261	+	0	NA	intron (NR_028353, intron 3 of 18)	ID_B1|SINE|B4	47070	NM_029810	76952	Mm.40965	NM_029810	ENSMUSG00000025041	Nt5c2	2010002I23Rik|CnII|ENSMUSG00000025039|Gm9751|Gmp|Nt5b|Pnt5|cN-II	5'-nucleotidase, cytosolic II	protein-coding
common_peak2-31725-54-96--0.426827080557394-1.04808805211778	chr9	8003451	8005203	+	0	NA	exon (NM_009534, exon 1 of 8)	exon (NM_009534, exon 1 of 8)	269	NM_001171147	22601	Mm.221992	NM_009534	ENSMUSG00000053110	Yap1	AI325207|Yap|Yap65|Yki|Yorkie	yes-associated protein 1	protein-coding
common_peak1-8060-14-16--0.188246680892695-0.308035960714963	chr1	173879446	173880105	+	0	NA	Intergenic	Intergenic	32107	NM_030710	30925	Mm.486404	NM_030710	ENSMUSG00000015314	Slamf6	KAL1|KAL1b|Ly108|NTB-A|NTBA|SF2000	SLAM family member 6	protein-coding
unique_peak2-39865-7-17--1.37083417114412-1.23399803405144	chrX	73673170	73673872	+	0	NA	Intergenic	L1_Mur2|LINE|L1	34832	NM_001033799	619294	Mm.423961	NM_001033799	ENSMUSG00000073085	4930428D18Rik	-	RIKEN cDNA 4930428D18 gene	protein-coding
common_peak1-18511-16-29--0.788626953340457-0.98872314135509	chr8	88118773	88119413	+	0	NA	Intergenic	RMER10A|LTR|ERVL	-39923	NM_019794	56445	Mm.475573	NM_019794	ENSMUSG00000031701	Dnaja2	1500017M13Rik|2010206B19Rik|DNAJ|DNJ3|Dnaj3|HIRIP4|PRO3015|mDj3	DnaJ (Hsp40) homolog, subfamily A, member 2	protein-coding
common_peak1-9022-6-7--0.434601889619698-0.97990265578305	chr11	61608185	61608710	+	0	NA	intron (NM_013881, intron 20 of 26)	intron (NM_013881, intron 20 of 26)	-32857	NM_001164243	212627	Mm.27703	NM_144806	ENSMUSG00000020528	Prpsap2	A230054F23Rik	phosphoribosyl pyrophosphate synthetase-associated protein 2	protein-coding
common_peak1-7864-11-9-0.186765489364251-0.344532117358383	chr1	133209462	133209981	+	0	NA	intron (NM_001081011, intron 17 of 22)	MTD|LTR|MaLR	-33581	NM_019777	56489	Mm.386783	NM_019777	ENSMUSG00000042349	Ikbke	AW558201|IKK-i|IKKepsilon|Ikki	inhibitor of kappaB kinase epsilon	protein-coding
common_peak2-26886-21-13-0.762134343208631-1.0220094258199	chr2	157394883	157395562	+	0	NA	Intergenic	Intergenic	-3125	NM_016916	53619	Mm.480461	NM_016916	ENSMUSG00000067787	Blcap	AI462828|Bc10	bladder cancer associated protein homolog (human)	protein-coding
common_peak1-15233-35-55--0.3759846635951-0.620905664975282	chr4	4792426	4793515	+	0	NA	Intergenic	L1_Mus2|LINE|L1	-72517	NM_177730	242291	Mm.218889	NM_177730		Impad1	1110001C20Rik|AA408880|AI451589|AL022796|B230207P20|Jaws|gPAPP	inositol monophosphatase domain containing 1	protein-coding
common_peak2-24338-9-14--0.717277189204299-0.53895475198017	chr17	4770396	4771068	+	0	NA	Intergenic	RMER17D|LTR|ERVK	-224342	NM_001085355	239985	Mm.133401	NM_001085355	ENSMUSG00000069729	Arid1b	8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235	AT rich interactive domain 1B (SWI-like)	protein-coding
unique_peak2-38773-7-22--1.72447112575882-2.07034318903805	chr7	127386759	127387481	+	0	NA	intron (NM_026458, intron 12 of 30)	Lx9|LINE|L1	39642	NM_026458	67928	Mm.158178	NM_026458	ENSMUSG00000062017	Abca14	1700110B15Rik|4930539G24Rik	ATP-binding cassette, sub-family A (ABC1), member 14	protein-coding
common_peak1-11017-22-17-0.477359103645092-0.633951497070961	chr15	38384133	38385101	+	0	NA	Intergenic	Intergenic	35685	NR_105916	102465574		NR_105916		Mir6951	mmu-mir-6951	microRNA mir-6951	ncRNA
common_peak2-25804-36-50--0.193104255803741-0.358200417993044	chr19	37821299	37822857	+	0	NA	Intergenic	L1Md_F2|LINE|L1	49780	NM_007811	13082	Mm.42230	NM_007811	ENSMUSG00000024987	Cyp26a1	Cyp26|P450RA|P450RAI|RAH	cytochrome P450, family 26, subfamily a, polypeptide 1	protein-coding
unique_peak1-431-11-4-1.18676548936425-1.68134727924692	chr1	162184296	162184795	+	0	NA	intron (NM_001038621, intron 3 of 8)	intron (NM_001038621, intron 3 of 8)	-41522	NM_009786	12301	Mm.10702	NM_009786	ENSMUSG00000014226	Cacybp	SIP	calcyclin binding protein	protein-coding
unique_peak1-1896-15-5-1.4272022498345-1.61682445937017	chr14	65636115	65637004	+	0	NA	intron (NM_001253731, intron 9 of 16)	(GA)n|Simple_repeat|Simple_repeat	67677	NM_001253731	210925	Mm.71332	NM_153414	ENSMUSG00000021975	Ints9	BC028953|D14Ertd231e	integrator complex subunit 9	protein-coding
unique_peak2-34706-11-8-0.338768582809301-1.14218153353838	chr15	31253526	31254044	+	0	NA	TTS (NM_026153)	TTS (NM_026153)	43729	NM_001164441	67434	Mm.102470	NM_026153	ENSMUSG00000022237	Ankrd33b	0610012A05Rik|3021401C12Rik|5730557B15Rik	ankyrin repeat domain 33B	protein-coding
unique_peak1-4924-6-1-1.5653981103803-1.56314192529759	chr4	57300389	57300907	+	0	NA	intron (NM_011207, intron 1 of 25)	L2a|LINE|L2	14061	NM_011207	545622	Mm.246552	NM_011207	ENSMUSG00000038764	Ptpn3	9530011I20Rik|PTP-H1|PTPCL	protein tyrosine phosphatase, non-receptor type 3	protein-coding
unique_peak1-4224-9-4-0.867685311516858-1.36011389749466	chr2	122700654	122701178	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	93181	NM_021507	59010	Mm.28986	NM_021507	ENSMUSG00000005803	Sqrdl	0610039J17Rik|4930557M22Rik	sulfide quinone reductase-like (yeast)	protein-coding
unique_peak1-1410-10-2-1.77145284428761-2.09384600808989	chr12	78911562	78912106	+	0	NA	Intergenic	L1MC4|LINE|L1	400706	NM_001252616	53618	Mm.35628	NM_016893	ENSMUSG00000021065	Fut8	-	fucosyltransferase 8	protein-coding
common_peak1-13971-20-18-0.240147271147608-0.388034239052786	chr2	93821845	93822648	+	0	NA	intron (NM_026944, intron 8 of 9)	URR1B|DNA|MER1_type	2055	NR_045827	70852	Mm.437014	NR_045827	ENSMUSG00000027196	4921507L20Rik	-	RIKEN cDNA 4921507L20 gene	ncRNA
unique_peak1-6375-13-0-3.77847203063777-4.51544993495972	chr7	70355602	70356334	+	0	NA	intron (NM_007390, intron 2 of 9)	intron (NM_007390, intron 2 of 9)	1444	NM_007390	11441	Mm.113464	NM_007390	ENSMUSG00000030525	Chrna7	Acra7|alpha7	cholinergic receptor, nicotinic, alpha polypeptide 7	protein-coding
unique_peak1-979-12-5-1.06381348436648-1.78669045979184	chr11	63861988	63862560	+	0	NA	intron (NM_178379, intron 3 of 6)	intron (NM_178379, intron 3 of 6)	30700	NM_178379	70383	Mm.340211	NM_178379	ENSMUSG00000042148	Cox10	2410004F01Rik|AU042636	cytochrome c oxidase assembly protein 10	protein-coding
common_peak1-17024-22-19-0.325356010200042-0.479250674391597	chr6	91205230	91206467	+	0	NA	intron (NM_001081437, intron 5 of 16)	intron (NM_001081437, intron 5 of 16)	43090	NM_007992	14115	Mm.249146	NM_007992	ENSMUSG00000064080	Fbln2	5730577E14Rik|FIBL-2	fibulin 2	protein-coding
common_peak2-24572-27-41--0.400771471883525-0.542588322087496	chr17	29489436	29490400	+	0	NA	Intergenic	ORR1C2|LTR|MaLR	-5069	NM_019880	56462	Mm.285322	NM_019880	ENSMUSG00000024012	Mtch1	2310034O17Rik|AI255158|AU018396|C77849|PSAP	mitochondrial carrier homolog 1 (C. elegans)	protein-coding
common_peak1-10252-15-34--1.11711826638931-1.74023246399357	chr13	55099805	55100257	+	0	NA	intron (NM_153131, intron 7 of 15)	MLT1A1|LTR|MaLR	22149	NM_001206390	212032	Mm.267479	NM_001033245	ENSMUSG00000025877	Hk3	HK III|HK-III	hexokinase 3	protein-coding
common_peak2-23868-26-39--0.3940290027289-0.556669751231374	chr15	102625010	102626116	+	0	NA	Intergenic	Intergenic	-48223	NR_104334	102216269		NR_104334		Cistr-act	Cistr	chondrogenic regulator lncRNA	ncRNA
unique_peak1-5106-13-5-1.19350952991661-1.95509489018123	chr4	152039217	152039820	+	0	NA	Intergenic	Intergenic	-32131	NR_033138	330004	Mm.291863	NM_001033414		Gm833	-	predicted gene 833	ncRNA
common_peak2-22054-11-6-0.701338662194009-1.32595962126035	chr12	69999240	69999718	+	0	NA	Intergenic	L1Md_F|LINE|L1	260694	NM_009093	20090	Mm.379006	NM_009093	ENSMUSG00000034892	Rps29	-	ribosomal protein S29	protein-coding
unique_peak2-34852-9-9--0.132314688483142-1.03275496310833	chr15	76457682	76458216	+	0	NA	intron (NM_183091, intron 25 of 25)	intron (NM_183091, intron 25 of 25)	-1492	NM_025842	66914	Mm.30028	NM_025842	ENSMUSG00000062381	Vps28	1110014J03Rik|AI847241|D730005C08Rik	vacuolar protein sorting 28 (yeast)	protein-coding
common_peak2-25895-9-18--1.05831410703937-0.965105923112245	chr19	45079085	45079799	+	0	NA	TTS (NM_053164)	TTS (NM_053164)	1490	NM_053164	94067	Mm.44174	NM_053164	ENSMUSG00000025208	Mrpl43	4930442D21Rik|bMRP36a	mitochondrial ribosomal protein L43	protein-coding
unique_peak1-441-8-5-0.420259917226415-1.10484139239135	chr1	165237152	165237613	+	0	NA	intron (NM_001025570, intron 1 of 2)	intron (NM_001025570, intron 1 of 2)	6399	NM_011127	18933	Mm.288642	NM_011127	ENSMUSG00000026586	Prrx1	A230024N07Rik|AA755424|AI385634|AI843499|K-2|Pmx|Pmx1|Prx1|mHox	paired related homeobox 1	protein-coding
unique_peak1-2706-14-5-1.31425365963649-1.4372489031793	chr16	91446940	91447702	+	0	NA	Intergenic	Intergenic	-18028	NR_077219	100503120	Mm.387130	NR_077219	ENSMUSG00000084866	A930006K02Rik	-	RIKEN cDNA A930006K02 gene	ncRNA
common_peak1-16873-57-62-0.288753116579012-0.653212744810989	chr6	65778366	65779732	+	0	NA	intron (NM_027547, intron 2 of 14)	intron (NM_027547, intron 2 of 14)	50093	NM_027547	70779	Mm.263355	NM_027547	ENSMUSG00000029913	Prdm5	4432417F03Rik|6530401I24Rik|AI197291|E130112L17Rik|PFM2	PR domain containing 5	protein-coding
unique_peak2-34332-17-82--2.15674309314189-9.4976551192477	chr13	98353692	98356183	+	0	NA	TTS (NR_046157)	TTS (NR_046157)	24982	NR_046157	328314	Mm.138047	NR_046157		Gm5086	B230311A21|EG328314	predicted gene 5086	ncRNA
common_peak2-24110-17-27--0.589058583852566-0.604689589251113	chr16	32858655	32859177	+	0	NA	intron (NM_001200038, intron 1 of 19)	intron (NM_001200038, intron 1 of 19)	9536	NM_001200038	100502698	Mm.327319	NM_172615	ENSMUSG00000035629	1700021K19Rik	5330403K09|Kiaa0226|Rubicon|mKIAA0226	RIKEN cDNA 1700021K19 gene	protein-coding
unique_peak1-828-8-4-0.683294323060208-1.21878474469819	chr11	8579499	8579975	+	0	NA	Intergenic	BC1_Mm|scRNA|scRNA	-15199	NM_001083587	319939	Mm.337820	NM_001083587	ENSMUSG00000020422	Tns3	BC023928|F830010I22Rik|TEM6|Tens1	tensin 3	protein-coding
common_peak2-24731-19-37--0.845240186781899-1.27201509741564	chr17	47501774	47502447	+	0	NA	Intergenic	Intergenic	-3726	NM_001146212	64657	Mm.216250	NM_183086	ENSMUSG00000034729	Mrps10	1110038B19Rik|AW743084|Rpms10	mitochondrial ribosomal protein S10	protein-coding
unique_peak2-39539-5-13--1.51173525806346-1.78669045979184	chr9	67025136	67025715	+	0	NA	Intergenic	Intergenic	44057	NR_045748	100502636	Mm.412607	NR_045748		Gm19299	-	predicted gene, 19299	ncRNA
unique_peak1-1920-11-5-0.923731083530457-1.477227296591	chr14	75797994	75798609	+	0	NA	Intergenic	Intergenic	-57488	NM_001128093	380918	Mm.484360	NM_001128093	ENSMUSG00000091722	Siah3	Gm912	seven in absentia homolog 3 (Drosophila)	protein-coding
common_peak2-21147-52-48-0.493550146150491-1.12396031894769	chr11	57644932	57645947	+	0	NA	5' UTR (NM_008213, exon 1 of 2)	5' UTR (NM_008213, exon 1 of 2)	210	NM_008213	15110	Mm.4746	NM_008213	ENSMUSG00000037335	Hand1	Ehand1|Hxt|Th1|Thing1|bHLHa27|eHAND	heart and neural crest derivatives expressed transcript 1	protein-coding
common_peak2-28279-11-5-0.923731083530457-1.477227296591	chr4	129563650	129564008	+	0	NA	Intergenic	MER74B|LTR|ERVL	-19641	NR_045190	319894	Mm.59196	NR_045190	ENSMUSG00000086369	E330017L17Rik	-	RIKEN cDNA E330017L17 gene	ncRNA
common_peak2-20692-15-16--0.075298090694683-0.301029995663976	chr10	91171688	91172311	+	0	NA	Intergenic	Intergenic	362931	NR_029812	723955		NR_029812	miRBase:MI0000715	Mir135a-2	Mirn135a-2	microRNA 135a-2	ncRNA
common_peak1-16241-37-45-0.0024311154288057-0.303416277109641	chr5	103774088	103775506	+	0	NA	Intergenic	Intergenic	-46749	NR_040699	74624	Mm.389662	NR_040699		4930429D17Rik	-	RIKEN cDNA 4930429D17 gene	ncRNA
unique_peak2-40001-2-5--1.50241675698448-1.08602067057793	chrX	164980007	164980297	+	0	NA	intron (NM_001033330, intron 1 of 19)	L1VL4|LINE|L1	35013	NM_001033330	333605	Mm.426168	NM_001033330	ENSMUSG00000049176	Frmpd4	Gm196|PKAP1|Pdzd10|Pdzk10|Preso1|preso	FERM and PDZ domain containing 4	protein-coding
unique_peak2-39127-11-8-0.338768582809301-1.14218153353838	chr8	84024069	84024658	+	0	NA	intron (NM_001297596, intron 2 of 24)	(CA)n|Simple_repeat|Simple_repeat	157902	NM_001297593	234515	Mm.324468	NM_001024617	ENSMUSG00000037940	Inpp4b	E130107I17Rik	inositol polyphosphate-4-phosphatase, type II	protein-coding
unique_peak2-34917-2-8--2.08737925770563-1.65811743852845	chr15	83574882	83575308	+	0	NA	Intergenic	(TTTG)n|Simple_repeat|Simple_repeat	-19626	NM_022723	64706	Mm.40393	NM_022723	ENSMUSG00000016763	Scube1	7330410C13Rik|A630023E24Rik	signal peptide, CUB domain, EGF-like 1	protein-coding
common_peak2-20086-40-37-0.411048169307513-0.786737236353031	chr1	155557856	155559035	+	0	NA	Intergenic	Intergenic	26514	NR_046171	329271	Mm.384841	NR_046171		C230024C17Rik	C230024C17	RIKEN cDNA C230024C17 gene	ncRNA
unique_peak1-5259-10-2-1.77145284428761-2.09384600808989	chr5	64315060	64315525	+	0	NA	intron (NM_145923, intron 6 of 6)	intron (NM_145923, intron 6 of 6)	44844	NM_145923	100532	Mm.243632	NM_145923	ENSMUSG00000047881	Rell1	AA536743	RELT-like 1	protein-coding
unique_peak1-1865-8-4-0.683294323060208-1.21878474469819	chr14	55671236	55671803	+	0	NA	Intergenic	Intergenic	14220	NR_073535	100151693	Mm.378403	NR_073535	ENSMUSG00000072492	Gm10364	EG545052|ENSMUSG00000072492	glyceraldehyde-3-phosphate dehydrogenase pseudogene	pseudo
common_peak1-12908-16-15-0.118263642268062-0.328191099940264	chr18	84398887	84399670	+	0	NA	intron (NM_001033341, intron 8 of 8)	intron (NM_001033341, intron 8 of 8)	141728	NM_146090	225791	Mm.147052	NM_146090	ENSMUSG00000049090	Zadh2	C530046K17Rik|Pthr3	zinc binding alcohol dehydrogenase, domain containing 2	protein-coding
unique_peak2-39129-9-12--0.510826311736872-0.394412252720706	chr8	84147262	84147916	+	0	NA	intron (NM_001297596, intron 2 of 24)	intron (NM_001297596, intron 2 of 24)	281128	NM_001297593	234515	Mm.324468	NM_001024617	ENSMUSG00000037940	Inpp4b	E130107I17Rik	inositol polyphosphate-4-phosphatase, type II	protein-coding
unique_peak1-4377-9-1-2.18961340640422-2.31132995230379	chr2	158415419	158415924	+	0	NA	Intergenic	Intergenic	20788	NR_040358	100045469	Mm.143404	NR_040358	ENSMUSG00000086496	Gm14204	OTTMUSG00000015935	predicted gene 14204	ncRNA
common_peak2-23259-5-6--0.511735258063458-0.947717972411649	chr15	25457463	25457882	+	0	NA	Intergenic	ORR1E|LTR|MaLR	-94633	NM_019472	17909	Mm.60590	NM_019472	ENSMUSG00000022272	Myo10	AW048724|D15Ertd600e|mKIAA0799	myosin X	protein-coding
unique_peak2-38837-5-7--0.704380336005853-1.01466476204226	chr7	142284111	142284513	+	0	NA	intron (NM_001033420, intron 32 of 51)	intron (NM_001033420, intron 32 of 51)	103373	NR_046050	74314	Mm.415339	NR_046050		1700120G07Rik	-	RIKEN cDNA 1700120G07 gene	ncRNA
common_peak1-11807-9-11--0.395349094316936-0.344532117358383	chr16	59471701	59472146	+	0	NA	intron (NM_025910, intron 1 of 9)	CpG	322	NM_025910	67014	Mm.289150	NM_025910	ENSMUSG00000022724	Mina	1810047J07Rik|2410057H13Rik|3830408E23Rik|AI449204	myc induced nuclear antigen	protein-coding
common_peak2-27859-7-12--0.901348887842903-1.31827279259406	chr3	152713973	152714494	+	0	NA	Intergenic	Intergenic	-69062	NM_012028	26938	Mm.40915	NM_012028		St6galnac5	AI851940|Siat7e	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	protein-coding
common_peak1-17601-22-14-0.740393509478886-0.983972868822056	chr7	44868970	44869824	+	0	NA	Intergenic	Intergenic	1650507	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak2-33639-15-13-0.204809828498052-0.368541233333383	chr11	98589006	98589808	+	0	NA	intron (NM_011869, intron 3 of 25)	PB1D10|SINE|Alu	1342	NM_011869	23989	Mm.246493	NM_011869	ENSMUSG00000017210	Med24	911GSE|AU040102|AW547152|D11Ertd307e|DRIP100|Gse2|Pparb2|Pparbp2|R75526|Thrap4|Trap100	mediator complex subunit 24	protein-coding
unique_peak1-4262-23-8-1.55184250306677-2.47979361197949	chr2	131403871	131404815	+	0	NA	Intergenic	Lx9|LINE|L1	-16322	NM_013460	11550	Mm.389380	NM_013460		Adra1d	Adra-1|Adra1|Adra1a|Gpcr8|Spr8|[a]1d|alpha1D-AR	adrenergic receptor, alpha 1d	protein-coding
common_peak1-13749-24-16-0.705747061517378-1.02077663956384	chr2	32914418	32915401	+	0	NA	intron (NM_178888, intron 3 of 28)	intron (NM_178888, intron 3 of 28)	27815	NM_178888	99326	Mm.41290	NM_178888	ENSMUSG00000038860	Garnl3	AW120551	GTPase activating RANGAP domain-like 3	protein-coding
common_peak1-17844-41-22-1.17758674879165-3.01957526180442	chr7	111155995	111157682	+	0	NA	Intergenic	Intergenic	4376	NM_147084	259088	Mm.422750	NM_147084	ENSMUSG00000066263	Olfr639	MOR12-1	olfactory receptor 639	protein-coding
common_peak2-21755-13-19--0.543456064249594-0.466170754204149	chr11	115974819	115975597	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-3659	NM_172570	217333	Mm.347770	NM_172570	ENSMUSG00000020773	Trim47	2210023F24Rik	tripartite motif-containing 47	protein-coding
unique_peak2-36291-7-15--1.20090916970181-0.947446088118041	chr2	71367374	71368077	+	0	NA	TTS (NR_002854)	TTS (NR_002854)	223	NM_010053	13390	Mm.4543	NM_010053	ENSMUSG00000041911	Dlx1	Dlx|Dlx-1	distal-less homeobox 1	protein-coding
unique_peak2-36447-4-6--0.830815435910851-0.989110657569874	chr2	136486002	136486350	+	0	NA	Intergenic	Intergenic	-53010	NM_011428	20614	Mm.45953	NM_011428	ENSMUSG00000027273	Snap25	Bdr|GENA70|SNAP-25|SUP|sp	synaptosomal-associated protein 25	protein-coding
unique_peak1-6927-7-4-0.477162735410827-1.09384600808989	chr8	106882708	106883219	+	0	NA	intron (NM_153582, intron 1 of 3)	L1MA8|LINE|L1	18469	NM_024217	68119	Mm.390108	NM_024217	ENSMUSG00000031875	Cmtm3	9430096L06Rik|AI413895|BNAS2|Cklfsf3	CKLF-like MARVEL transmembrane domain containing 3	protein-coding
common_peak2-31318-53-146--1.05869933242044-6.04763651319914	chr8	79398037	79399766	+	0	NA	intron (NR_028579, intron 1 of 1)	intron (NR_028579, intron 1 of 1)	25171	NR_028579	100039211	Mm.367571	NR_028579	ENSMUSG00000074235	Gm10649	ENSMUSG00000074235	predicted gene 10649	ncRNA
common_peak2-28045-12-12--0.0516637330534535-0.309718203022949	chr4	57915678	57916297	+	0	NA	Intergenic	ID_B1|SINE|B4	13149	NM_178727	242484	Mm.23214	NM_178727	ENSMUSG00000052117	D630039A03Rik	-	RIKEN cDNA D630039A03 gene	protein-coding
common_peak2-29254-26-29-0.0210084965499435-0.304710633611964	chr5	140383458	140384647	+	0	NA	intron (NM_175522, intron 1 of 1)	CpG	155	NM_175522	243312	Mm.237102	NM_175522	ENSMUSG00000048988	Elfn1	A930017N06Rik|AI197272|Ppp1r28	leucine rich repeat and fibronectin type III, extracellular 1	protein-coding
unique_peak1-5351-19-8-1.23276232521937-1.61268301619756	chr5	92112376	92113193	+	0	NA	Intergenic	L1Md_A|LINE|L1	83542	NR_045383	73452	Mm.396233	NR_045383		1700063O14Rik	-	RIKEN cDNA 1700063O14 gene	ncRNA
common_peak1-19175-18-58--1.56972389813349-4.49741418752704	chr9	96782706	96783526	+	0	NA	intron (NM_001289645, intron 1 of 6)	intron (NM_001289645, intron 1 of 6)	6777	NM_001289646	235534	Mm.233031	NM_153420	ENSMUSG00000043587	Pxylp1	9430094M07Rik|Acpl2|BB177120|C130099A20Rik	2-phosphoxylose phosphatase 1	protein-coding
unique_peak2-33242-5-5--0.289342836727009-0.909929411522249	chr10	125961026	125961342	+	0	NA	Intergenic	Intergenic	377243	NM_026858	68876	Mm.276769	NM_026858	ENSMUSG00000025436	Xrcc6bp1	1110068E08Rik|2410012H02Rik	XRCC6 binding protein 1	protein-coding
unique_peak2-32961-14-17--0.270708841084668-0.328191099940267	chr10	44005892	44006794	+	0	NA	intron (NM_053069, intron 2 of 7)	B4A|SINE|B4	18179	NM_053069	11793	Mm.22264	NM_053069	ENSMUSG00000038160	Atg5	2010107M05Rik|3110067M24Rik|AW319544|Apg5l|Atg5l|C88337|Paddy	autophagy related 5	protein-coding
common_peak2-31555-13-10-0.319040412000471-0.446472590016315	chr8	113523260	113523760	+	0	NA	Intergenic	RLTR23|LTR|ERV1	-1787	NM_007916	13680	Mm.287901	NM_007916	ENSMUSG00000015023	Ddx19a	DBP5|Ddx19|Eif4a-rs1	DEAD (Asp-Glu-Ala-Asp) box polypeptide 19a	protein-coding
common_peak2-25852-41-51-0.000708986707568471-0.303138254425616	chr19	42147018	42148622	+	0	NA	Intergenic	Intergenic	13040	NM_198108	226123	Mm.259441	NM_198108	ENSMUSG00000049670	Morn4	-	MORN repeat containing 4	protein-coding
unique_peak1-1625-12-3-1.64877598508764-2.36932189928148	chr13	43262277	43262884	+	0	NA	intron (NM_001252640, intron 3 of 7)	intron (NM_001252640, intron 3 of 7)	4290	NM_001252639	67046	Mm.269213	NM_025935	ENSMUSG00000021368	Tbc1d7	2610009C09Rik	TBC1 domain family, member 7	protein-coding
common_peak2-19925-14-7-0.899216160357645-0.947446088118041	chr1	125701156	125701680	+	0	NA	intron (NM_199021, intron 3 of 25)	intron (NM_199021, intron 3 of 25)	240718	NM_199021	269109	Mm.483255	NM_199021	ENSMUSG00000036815	Dpp10	6430601K09Rik|DPP X|Dprp3	dipeptidylpeptidase 10	protein-coding
common_peak1-11312-42-83--0.649988094911577-1.64416639885613	chr15	84923228	84924064	+	0	NA	intron (NM_080470, intron 15 of 24)	intron (NM_080470, intron 15 of 24)	38741	NM_080470	140557	Mm.182737	NM_080470	ENSMUSG00000022432	Smc1b	SMC-1B|SMC1beta|Smc1l2	structural maintenance of chromosomes 1B	protein-coding
unique_peak1-6798-10-6-0.549060422951165-1.21398586181642	chr8	70129663	70130177	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	82167	NM_008674	17962	Mm.57193	NM_008674	ENSMUSG00000056426	Nat3	-	N-acetyltransferase 3	protein-coding
unique_peak1-3894-13-0-3.77847203063777-4.51544993495972	chr2	20548700	20549293	+	0	NA	intron (NM_001081006, intron 3 of 21)	intron (NM_001081006, intron 3 of 21)	107856	NM_001177631	208618	Mm.237935	NM_029895	ENSMUSG00000036617	Etl4	6620402G01Rik|9430077C05Rik|BC026657|E330027G05Rik|Etl-4|Skt	enhancer trap locus 4	protein-coding
common_peak2-30664-7-9--0.522837264589173-1.05908390183068	chr7	101663614	101664033	+	0	NA	Intergenic	Intergenic	1435434	NM_021427	58238	Mm.113787	NM_021427		Fam181b	A830059I20Rik|AB041569	family with sequence similarity 181, member B	protein-coding
common_peak1-12511-35-19-1.10944216357514-2.37206698596504	chr18	37879394	37880373	+	0	NA	promoter-TSS (NM_033576)	promoter-TSS (NM_033576)	-325	NM_033576	93701	Mm.247203	NM_033576		Pcdhgb4	-	protocadherin gamma subfamily B, 4	protein-coding
common_peak2-28399-9-10--0.269818212233077-1.05503135781948	chr4	140629870	140630294	+	0	NA	intron (NM_025383, intron 2 of 7)	B1_Mur2|SINE|Alu	4178	NM_025383	66147	Mm.21187	NM_025383	ENSMUSG00000028923	Necap2	1110005F07Rik|AA409105|C78898	NECAP endocytosis associated 2	protein-coding
unique_peak1-4874-11-10-0.0492619656143161-0.31137425193576	chr4	12135963	12136665	+	0	NA	Intergenic	L1VL4|LINE|L1	-37152	NM_026558	68099	Mm.25340	NM_026558	ENSMUSG00000028218	Fam92a	6720467C03Rik|Fam92a1	family with sequence similarity 92, member A	protein-coding
unique_peak1-4709-17-3-2.21829633820504-3.11807310444576	chr3	102490191	102490949	+	0	NA	Intergenic	Intergenic	-48123	NM_027533	70747	Mm.27469	NM_027533	ENSMUSG00000027858	Tspan2	6330415F13Rik|B230119D02Rik|tspan-2	tetraspanin 2	protein-coding
common_peak2-25957-16-19--0.203664452619301-0.325169893479371	chr19	47865285	47865695	+	0	NA	intron (NM_027559, intron 12 of 37)	AT_rich|Low_complexity|Low_complexity	46361	NM_027559	100048534	Mm.29457	NM_027559	ENSMUSG00000044948	Cfap43	4632415N18Rik|4930428C11Rik|4930463G05Rik|AI429486|D19Ertd652e|Wdr96	cilia and flagella associated protein 43	protein-coding
common_peak1-14708-30-19-0.84774731460451-1.46094028072561	chr3	70803251	70804609	+	0	NA	Intergenic	Intergenic	-192717	NR_040556	625901	Mm.366028	NR_040556	ENSMUSG00000097252	Gm6634	EG625901	predicted gene 6634	ncRNA
unique_peak1-1791-11-1-2.50869358425161-2.83420869758413	chr14	21825527	21826097	+	0	NA	intron (NM_009502, intron 10 of 20)	intron (NM_009502, intron 10 of 20)	45852	NM_018829	55946	Mm.376269	NM_018829		Ap3m1	1200013D09Rik|C78982|R75378	adaptor-related protein complex 3, mu 1 subunit	protein-coding
unique_peak2-34153-5-10--1.16381195464315-1.33892459842472	chr13	24761516	24761945	+	0	NA	intron (NM_001286101, intron 2 of 14)	intron (NM_001286101, intron 2 of 14)	31213	NM_029679	193385	Mm.217319	NM_029679	ENSMUSG00000036006	Fam65b	-	family with sequence similarity 65, member B	protein-coding
common_peak1-15112-109-279--0.743123335057766-6.47428447116436	chr3	135438054	135439766	+	0	NA	Intergenic	Intergenic	-49333	NM_026228	67547	Mm.30239	NM_026228	ENSMUSG00000053897	Slc39a8	4933419D20Rik|AA986696|BIGM103|ZIP-8|Zip8	solute carrier family 39 (metal ion transporter), member 8	protein-coding
unique_peak2-34869-8-8--0.164702583494742-1.00793137938329	chr15	77843291	77843772	+	0	NA	intron (NM_007583, intron 2 of 3)	L2b|LINE|L2	-42277	NM_018749	55944	Mm.3955	NM_018749	ENSMUSG00000016554	Eif3d	66/67kDa|AA407891|Eif3s7|eIF3p66	eukaryotic translation initiation factor 3, subunit D	protein-coding
unique_peak1-7218-8-3-1.00522241794757-1.39487600375387	chr9	70230143	70230629	+	0	NA	intron (NM_181072, intron 25 of 27)	intron (NM_181072, intron 25 of 27)	23174	NR_049200	100885839		NR_049200	miRBase:MI0019195	Mir5626	mmu-mir-5626	microRNA mir-5626	ncRNA
common_peak2-27996-28-25-0.352519401680371-0.541406350295756	chr4	45319993	45320875	+	0	NA	intron (NM_027266, intron 5 of 8)	intron (NM_027266, intron 5 of 8)	10394	NM_027266	69934	Mm.46761	NM_027266	ENSMUSG00000035601	Trmt10b	2610042J10Rik|Rg9mtd3|Rnmtd3	tRNA methyltransferase 10B	protein-coding
unique_peak1-1224-141-28-2.97505984150529-38.9848477594954	chr11	109011578	109012347	+	0	NA	Intergenic	Intergenic	-6279	NR_037978	268498	Mm.227970	NM_001085512	ENSMUSG00000078605	E030025P04Rik	Gm664	RIKEN cDNA E030025P04 gene	ncRNA
common_peak1-13934-15-7-1.01216475055566-1.08658567012551	chr2	90489716	90490398	+	0	NA	Intergenic	Intergenic	-27315	NM_021512	59015	Mm.24532	NM_021512	ENSMUSG00000051329	Nup160	160kDa|2810011M03Rik|AA414952|AU020188|Gtl-13|Gtl1-13|Gtl13|mKIAA0197	nucleoporin 160	protein-coding
common_peak1-10062-10-35--1.81350965643354-3.49519823291231	chr13	21716450	21717003	+	0	NA	Intergenic	Lx7|LINE|L1	-12853	NM_146744	258739	Mm.377667	NM_146744	ENSMUSG00000051258	Olfr1362	MOR256-8|Olfr1363-ps1	olfactory receptor 1362	protein-coding
common_peak2-27295-11-11--0.0762689164695427-0.301029995663976	chr3	59204845	59205469	+	0	NA	Intergenic	Intergenic	-56979	NM_001162884	242050	Mm.228086	NM_001162884	ENSMUSG00000036334	Igsf10	6530405F15Rik|9030224D03|AA409708|AA536958|AI414626|Adlican2|CMF608	immunoglobulin superfamily, member 10	protein-coding
unique_peak1-3309-10-0-3.35641534500877-3.31132995230379	chr18	78133701	78134156	+	0	NA	Intergenic	Intergenic	-1278	NM_001195633	100502841	Mm.297782	NM_001195633	ENSMUSG00000039840	Epg5	4732475F16|5430411K18Rik|AI661957|AW456499|mKIAA1632	ectopic P-granules autophagy protein 5 homolog (C. elegans)	protein-coding
unique_peak2-33208-9-11--0.395349094316936-0.344532117358383	chr10	111997418	111997902	+	0	NA	Intergenic	ORR1B1|LTR|MaLR	-166322	NR_040579	69355	Mm.84337	NR_040579		1700010J16Rik	-	RIKEN cDNA 1700010J16 gene	ncRNA
unique_peak1-2650-10-1-2.35641534500877-2.57096726280955	chr16	48987034	48987518	+	0	NA	intron (NM_027341, intron 1 of 30)	intron (NM_027341, intron 1 of 30)	6949	NM_001110017	224170	Mm.275138	NM_027341	ENSMUSG00000064061	Dzip3	2310047C04Rik|2A-HUB|6430549P11Rik|A230104G20	DAZ interacting protein 3, zinc finger	protein-coding
common_peak1-18128-11-13--0.298661337805991-0.337263207250336	chr8	8659557	8660151	+	0	NA	intron (NM_010111, intron 1 of 4)	CpG	919	NM_010111	13642	Mm.209813	NM_010111	ENSMUSG00000001300	Efnb2	ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1	ephrin B2	protein-coding
unique_peak2-36785-3-6--1.22133801201688-1.08602067057793	chr3	79244634	79245027	+	0	NA	intron (NM_001142953, intron 3 of 4)	intron (NM_001142953, intron 3 of 4)	95532	NM_001142953	100233207	Mm.373801	NM_001142953	ENSMUSG00000091685	Gm17359	-	predicted gene, 17359	protein-coding
common_peak2-25273-6-8--0.60452689106201-1.03789460276074	chr18	67985960	67986361	+	0	NA	intron (NM_027556, intron 14 of 45)	intron (NM_027556, intron 14 of 45)	26399	NM_027556	70799	Mm.30857	NM_027556	ENSMUSG00000024542	Cep192	4631422C13Rik|D430014P18Rik	centrosomal protein 192	protein-coding
common_peak2-25041-48-105--0.756993303328384-2.60544095518703	chr18	31759002	31760844	+	0	NA	intron (NM_026165, intron 4 of 7)	intron (NM_026165, intron 4 of 7)	9633	NM_026165	67453	Mm.23896	NM_026165	ENSMUSG00000024259	Slc25a46	1200007B05Rik|AI325987	solute carrier family 25, member 46	protein-coding
unique_peak2-32592-6-5--0.0195643903408542-0.947717972411649	chr1	90205723	90206104	+	0	NA	intron (NM_134252, intron 2 of 26)	intron (NM_134252, intron 2 of 26)	2626	NM_134252	171382	Mm.218753	NM_134252	ENSMUSG00000036251	Trpm8	CMR1|LTRPC6|LTrpC-6|TRPP8|Trp-p8	transient receptor potential cation channel, subfamily M, member 8	protein-coding
common_peak2-24019-6-9--0.75652998450706-1.11707584880836	chr16	22163143	22163516	+	0	NA	promoter-TSS (NM_183029)	promoter-TSS (NM_183029)	43	NM_183029	319765	Mm.489442	NM_183029	ENSMUSG00000033581	Igf2bp2	C330012H03Rik|IMP-2|Imp2|Neilsen	insulin-like growth factor 2 mRNA binding protein 2	protein-coding
unique_peak2-39326-3-5--0.998945590680433-0.96108193396963	chr8	126720761	126721082	+	0	NA	Intergenic	Intergenic	-34373	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
common_peak1-10628-25-21-0.402418286707809-0.580176690544129	chr14	40947510	40948742	+	0	NA	Intergenic	L1Md_F2|LINE|L1	479175	NR_045936	73591	Mm.65499	NR_045936		1700109I08Rik	-	RIKEN cDNA 1700109I08 gene	ncRNA
unique_peak2-37623-6-7--0.434601889619698-0.97990265578305	chr5	66202441	66202867	+	0	NA	intron (NM_001024917, intron 13 of 19)	intron (NM_001024917, intron 13 of 19)	47894	NM_001024917	333789	Mm.332398	NM_001024917	ENSMUSG00000037795	N4bp2	B3bp|E430014I16|Gm1791|Gm868	NEDD4 binding protein 2	protein-coding
common_peak2-31803-18-23--0.272043349492805-0.34651636097721	chr9	36767910	36768823	+	0	NA	intron (NM_148950, intron 3 of 11)	intron (NM_148950, intron 3 of 11)	117122	NM_183171	235180	Mm.5264	NM_183171	ENSMUSG00000032118	Fez1	UNC-76|UNC76	fasciculation and elongation protein zeta 1 (zygin I)	protein-coding
common_peak1-8498-30-30-0.215479099104998-0.419637632935632	chr10	81320600	81321720	+	0	NA	Intergenic	RLTR8|LTR|ERVK	-5519	NM_001243067	73610	Mm.490466	NM_001243067		Zfp433	1700123A16Rik	RIKEN cDNA 1700123A16 gene	protein-coding
common_peak1-11784-23-7-1.72176750450908-2.82905316394614	chr16	45953000	45954011	+	0	NA	Intergenic	Intergenic	57021	NM_001134480	433022	Mm.380993	NM_001134480	ENSMUSG00000087141	Plcxd2	AW494639|EG433022	phosphatidylinositol-specific phospholipase C, X domain containing 2	protein-coding
common_peak2-30808-55-65-0.160225751794249-0.427657599516012	chr7	127776592	127778119	+	0	NA	Intergenic	Lx3C|LINE|L1	-1348	NM_025899	67003	Mm.334206	NM_025899	ENSMUSG00000030884	Uqcrc2	1500004O06Rik	ubiquinol cytochrome c reductase core protein 2	protein-coding
unique_peak1-1884-13-6-0.971117108580164-1.01572999746118	chr14	62871346	62872007	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	40140	NM_173419	239133	Mm.127330	NM_173419	ENSMUSG00000048281	Dleu7	BC038059	deleted in lymphocytic leukemia, 7	protein-coding
unique_peak1-4738-20-3-2.48807478459119-3.8429424127101	chr3	107878053	107878830	+	0	NA	exon (NM_001289720, exon 16 of 18)	exon (NM_001289720, exon 16 of 18)	9903	NM_001289720	109674	Mm.274335	NM_028779	ENSMUSG00000027889	Ampd2	1200014F01Rik|AI552571|Ampd-2	adenosine monophosphate deaminase 2	protein-coding
common_peak2-27356-47-52-0.206920970203349-0.456849196733765	chr3	79590842	79591871	+	0	NA	Intergenic	B3|SINE|B2	-49640	NM_212452	381489	Mm.331086	NM_212452		Rxfp1	Gm1018|Lgr7	relaxin/insulin-like family peptide receptor 1	protein-coding
common_peak1-13969-11-8-0.338768582809301-1.14218153353838	chr2	92748225	92748789	+	0	NA	Intergenic	RMER4B|LTR|ERVK	-6751	NM_030725	80976	Mm.33490	NM_030725	ENSMUSG00000027220	Syt13	5730409J20Rik|AI549909|mKIAA1427	synaptotagmin XIII	protein-coding
unique_peak1-1002-10-7-0.356415345008769-1.12966497611638	chr11	71018735	71019335	+	0	NA	intron (NM_001040696, intron 3 of 14)	L1Md_F2|LINE|L1	-4077	NM_001162414	637515	Mm.390402	NM_001039680	ENSMUSG00000070390	Nlrp1b	ENSMUSG00000070390|Nalp1b|OTTMUSG00000006087|OTTMUSG00000006089	NLR family, pyrin domain containing 1B	protein-coding
common_peak1-12112-99-29-2.31246714767413-19.5239047453681	chr17	26583185	26585507	+	0	NA	Intergenic	Intergenic	32436	NM_001081656	240055	Mm.133211	NM_001081656	ENSMUSG00000034413	Neurl1b	C230078M08Rik|EG240055	neuralized homolog 1b (Drosophila)	protein-coding
unique_peak1-2034-9-3-1.18961340640422-1.57096726280955	chr15	25377940	25378404	+	0	NA	intron (NR_027376, intron 1 of 1)	ORR1D1|LTR|MaLR	34225	NR_027376	432939	Mm.146555	NM_001013791		Gm5468	100040583|EG432939	predicted gene 5468	ncRNA
common_peak1-12390-23-28--0.136213490618491-0.317118655902079	chr17	70737413	70738209	+	0	NA	Intergenic	Lx6|LINE|L1	-36321	NM_177639	224997	Mm.311840	NM_027712	ENSMUSG00000003279	Dlgap1	4933422O14Rik|9630002F18|AI845682|AI848168|BB075781|D17Bwg0511e|GKAP/SAPAP|GKPA/SAPAP|Gkap|Sapap1|mKIAA4162	discs, large (Drosophila) homolog-associated protein 1	protein-coding
common_peak2-32063-7-9--0.522837264589173-1.05908390183068	chr9	90114812	90115311	+	0	NA	intron (NM_194334, intron 8 of 12)	MLT1E2|LTR|MaLR	50546	NM_194334	67016	Mm.335347	NM_194334	ENSMUSG00000037410	Tbc1d2b	1810061M12Rik|AI480956|AV021536|AV023399|AW491493|mKIAA1055	TBC1 domain family, member 2B	protein-coding
common_peak2-30725-22-13-0.8399291830298-1.1381569562463	chr7	114204054	114204689	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-12973	NM_147033	259035	Mm.377800	NM_147033	ENSMUSG00000049674	Olfr714	MOR263-2|P4	olfactory receptor 714	protein-coding
unique_peak2-35395-4-13--1.83081543591085-2.04196296489515	chr17	31892386	31892936	+	0	NA	Intergenic	Intergenic	77785	NM_001278570	12954	Mm.1228	NM_013501	ENSMUSG00000024041	Cryaa	Acry-1|Crya-1|Crya1|DAcry-1|lop18	crystallin, alpha A	protein-coding
common_peak1-8058-36-21-1.01988946753046-2.24027827302618	chr1	172561889	172563487	+	0	NA	Intergenic	Intergenic	-11975	NM_177068	320078	Mm.287131	NM_177068	ENSMUSG00000038463	Olfml2b	1110018N05Rik|4832415H08Rik|AI467542	olfactomedin-like 2B	protein-coding
unique_peak1-4993-17-1-3.21829633820504-4.59734841376773	chr4	116660621	116661565	+	0	NA	3' UTR (NM_001029912, exon 14 of 14)	3' UTR (NM_001029912, exon 14 of 14)	5887	NM_009478	22275	Mm.46484	NM_009478	ENSMUSG00000028684	Urod	AI323803|Uro-d	uroporphyrinogen decarboxylase	protein-coding
common_peak2-28135-25-24-0.217993715570381-0.403610417161433	chr4	97868567	97869231	+	0	NA	Intergenic	Intergenic	181057	NM_053157	94043	Mm.331719	NM_053157	ENSMUSG00000028563	Tm2d1	2310026L18Rik|AA990549|Bbp	TM2 domain containing 1	protein-coding
unique_peak2-33284-4-8--1.19338551529556-1.21878474469819	chr11	60178259	60178666	+	0	NA	exon (NM_029044, exon 5 of 14)	exon (NM_029044, exon 5 of 14)	11580	NM_029044	74665	Mm.133570	NM_029044	ENSMUSG00000056598	Lrrc48	4930449E07Rik	leucine rich repeat containing 48	protein-coding
common_peak2-26489-38-45-0.0478907032415172-0.322047890816902	chr2	83644490	83645164	+	0	NA	3' UTR (NM_008402, exon 30 of 30)	3' UTR (NM_008402, exon 30 of 30)	-8058	NM_175514	241520	Mm.330351	NM_175514	ENSMUSG00000048388	Fam171b	D430039N05Rik	family with sequence similarity 171, member B	protein-coding
common_peak1-14618-14-15--0.100783839642355-0.301029995663982	chr3	52400629	52401243	+	0	NA	Intergenic	Intergenic	-142710	NR_038079	329639	Mm.131245	NR_038079		Gm2447	100039832|A530017F20	predicted gene 2447	ncRNA
common_peak1-15378-20-19-0.16614668970383-0.348739088570342	chr4	62208129	62209041	+	0	NA	exon (NM_177607, exon 15 of 15)	exon (NM_177607, exon 15 of 15)	-12296	NM_019492	50780	Mm.286753	NM_019492	ENSMUSG00000059810	Rgs3	4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S	regulator of G-protein signaling 3	protein-coding
unique_peak1-5144-10-2-1.77145284428761-2.09384600808989	chr5	17305286	17305814	+	0	NA	intron (NM_001159558, intron 9 of 15)	L1Md_T|LINE|L1	36164	NM_001159555	12491	Mm.18628	NM_007643	ENSMUSG00000002944	Cd36	FAT|GPIV|Scarb3	CD36 antigen	protein-coding
common_peak1-15099-75-109--0.0422927217813749-0.305051298328157	chr3	132683408	132684716	+	0	NA	intron (NM_026231, intron 5 of 11)	L1Md_F3|LINE|L1	70642	NM_026231	67553	Mm.304899	NM_026231	ENSMUSG00000028018	Gstcd	4933434L15Rik	glutathione S-transferase, C-terminal domain containing	protein-coding
common_peak1-19314-11-12--0.191746133889479-0.310474156842889	chr9	123020872	123021589	+	0	NA	intron (NM_026917, intron 1 of 6)	RLTR25B|LTR|ERVK	1093	NM_026917	69035	Mm.28300	NM_026917		Zdhhc3	1110020O22Rik|1810006O10Rik|2210017C02Rik|DHHC-3|GODZ|Gramp1|Zfp373	zinc finger, DHHC domain containing 3	protein-coding
common_peak1-13218-11-9-0.186765489364251-0.344532117358383	chr19	24288301	24288935	+	0	NA	intron (NM_011597, intron 1 of 22)	PB1D7|SINE|Alu	10898	NM_011597	21873	Mm.104744	NM_011597	ENSMUSG00000024812	Tjp2	ZO-2	tight junction protein 2	protein-coding
common_peak1-8912-14-9-0.577288065470282-0.630231561310125	chr11	51059107	51059658	+	0	NA	Intergenic	RodERV21-int|LTR|ERV1	17071	NM_177567	193286	Mm.80975	NM_177567	ENSMUSG00000045942	BC049762	4930503F14	cDNA sequence BC049762	protein-coding
common_peak2-27211-10-4-1.03448725012141-1.5150158574804	chr3	41375671	41376074	+	0	NA	intron (NM_001130186, intron 1 of 10)	intron (NM_001130186, intron 1 of 10)	7070	NM_001130186	269424	Mm.286285	NM_172303	ENSMUSG00000025764	Jade1	AU041499|D530048A03Rik|Phf17|mKIAA1807	jade family PHD finger 1	protein-coding
unique_peak2-34664-5-8--0.874305337448166-1.10484139239135	chr15	95993826	95994359	+	0	NA	Intergenic	L2a|LINE|L2	-19139	NR_028311	100043335	Mm.247464	NR_028311		Gm4371	EG667874|Gm8854	eukaryotic translation initiation factor 3, subunit I pseudogene	pseudo
common_peak2-29292-14-10-0.439784541720347-0.519648556297791	chr5	144220446	144220876	+	0	NA	Intergenic	MYSERV6-int|LTR|ERVK	-4700	NM_144915	231871	Mm.469963	NM_144915	ENSMUSG00000039206	Daglb	E330036I19Rik	diacylglycerol lipase, beta	protein-coding
common_peak1-15557-10-34--1.7728676719362-3.30471521892359	chr4	123917515	123918056	+	0	NA	Intergenic	MTC|LTR|MaLR	245417	NR_040774	78460	Mm.452060	NR_040774		1700057H15Rik	-	RIKEN cDNA 1700057H15 gene	ncRNA
common_peak1-14408-58-78--0.00783081328660629-0.302413108461692	chr2	174109817	174111481	+	0	NA	exon (NM_019690, exon 2 of 5)	exon (NM_019690, exon 2 of 5)	828	NM_022000	14683	Mm.125770	NM_010309	ENSMUSG00000027523	Gnas	5530400H20Rik|A930027G11Rik|C130027O20Rik|GPSA|GSP|Galphas|Gnas1|Gnasxl|Gsa|Nesp|Nespl|Oed-Sml|Oedsml|P1|P2|P3|PHP1A|PHP1B|POH	GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	protein-coding
common_peak2-29878-24-52--0.934710551795482-1.8888294360187	chr6	108782794	108783901	+	0	NA	intron (NM_138677, intron 1 of 11)	intron (NM_138677, intron 1 of 11)	4712	NM_138677	192193	Mm.21596	NM_138677	ENSMUSG00000030104	Edem1	A130059K23Rik|EDEM|mKIAA0212	ER degradation enhancer, mannosidase alpha-like 1	protein-coding
common_peak2-27092-179-383--0.336921825637686-2.27805850395162	chr3	119782022	119783807	+	0	NA	Intergenic	Lx5|LINE|L1	-296608	NM_019550	56195	Mm.29966	NM_019550	ENSMUSG00000028134	Ptbp2	Ptb2|brPTB|nPTB	polypyrimidine tract binding protein 2	protein-coding
common_peak2-25571-67-73-0.334958117154045-0.825549665544934	chr19	6951053	6952642	+	0	NA	Intergenic	RLTR19|LTR|ERVK	-19146	NM_001081291	78317	Mm.329596	NM_198008	ENSMUSG00000047810	Ccdc88b	2610041P08Rik|Ccdc88	coiled-coil domain containing 88B	protein-coding
common_peak2-27374-84-106-0.193467072487879-0.545044951333066	chr3	86141730	86142797	+	0	NA	intron (NM_030695, intron 22 of 56)	intron (NM_030695, intron 22 of 56)	113651	NM_001077687	80877	Mm.439825	NM_030695	ENSMUSG00000028080	Lrba	C80285|D3Ertd775e|Lab300|Lba	LPS-responsive beige-like anchor	protein-coding
common_peak1-13834-12-9-0.326847890200276-0.459837087125828	chr2	59438843	59439481	+	0	NA	Intergenic	LTR50|LTR|ERVL	-10937	NM_198294	66860	Mm.27917	NM_198294	ENSMUSG00000035168	Tanc1	1200003E16Rik|Tanc|mKIAA1728	tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1	protein-coding
unique_peak1-24-7-1-1.79909083029819-1.80617997398389	chr1	8791670	8792191	+	0	NA	intron (NM_027671, intron 5 of 20)	Lx6|LINE|L1	498028	NM_001290390	71096	Mm.336395	NM_027671		Sntg1	4933426D16Rik|G1SYN|SYN4	syntrophin, gamma 1	protein-coding
common_peak1-11070-10-13--0.450939577048835-0.386243247519795	chr15	58256784	58257323	+	0	NA	intron (NM_145959, intron 6 of 23)	RLTR20A2|LTR|ERVK	10030	NM_145959	210998	Mm.3224	NM_145959	ENSMUSG00000037119	D15Ertd621e	AV220772|BC033609|Fam91a1|SKIN|mKIAA0493	DNA segment, Chr 15, ERATO Doi 621, expressed	protein-coding
common_peak1-11693-18-14-0.406028555619833-0.532159081577619	chr16	30776477	30777200	+	0	NA	Intergenic	Intergenic	177029	NM_177632	224093	Mm.28244	NM_177632	ENSMUSG00000046546	Fam43a	Tuf1	family with sequence similarity 43, member A	protein-coding
common_peak2-19926-7-8--0.370834171144123-1.00793137938329	chr1	127206098	127206509	+	0	NA	Intergenic	ORR1B1|LTR|MaLR	126001	NM_023735	74117	Mm.183102	NM_023735	ENSMUSG00000026341	Actr3	1200003A09Rik|Arp3	ARP3 actin-related protein 3	protein-coding
unique_peak1-3375-38-16-1.48398981804819-3.936930499713	chr19	3637932	3639114	+	0	NA	intron (NM_008513, intron 5 of 22)	intron (NM_008513, intron 5 of 22)	48041	NM_008513	16973	Mm.274581	NM_008513	ENSMUSG00000024913	Lrp5	BMND1|HBM|LR3|LRP7|OPPG|mKIAA4142	low density lipoprotein receptor-related protein 5	protein-coding
unique_peak2-38562-5-5--0.289342836727009-0.909929411522249	chr7	64374019	64374411	+	0	NA	intron (NM_008074, intron 3 of 9)	IAPLTR2a|LTR|ERVK	268026	NM_008074	14407	Mm.434343	NM_008074		Gabrg3	B230362M20Rik|Gabrg-3	gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3	protein-coding
unique_peak1-649-8-1-2.00522241794757-2.05605744720049	chr10	52427832	52428288	+	0	NA	intron (NM_178675, intron 1 of 7)	RCHARR1|DNA|MER1_type	17753	NM_178675	215085	Mm.338690	NM_178675	ENSMUSG00000038602	Slc35f1	Duf6|E130016L02	solute carrier family 35, member F1	protein-coding
unique_peak2-38716-7-18--1.4488366831454-1.38887104242188	chr7	111028556	111029151	+	0	NA	TTS (NM_013618)	TTS (NM_013618)	1902	NM_013618	18367	Mm.445781	NM_013618	ENSMUSG00000058200	Olfr66	5'[b]1|5'beta1|MOR1-3|ORL532	olfactory receptor 66	protein-coding
unique_peak1-5496-13-1-2.77847203063777-3.64038867156802	chr5	135682529	135683155	+	0	NA	intron (NM_011714, intron 4 of 18)	intron (NM_011714, intron 4 of 18)	19649	NM_011714	22385	Mm.40331	NM_011714	ENSMUSG00000002748	Baz1b	C87820|WSTF|Wbscr9	bromodomain adjacent to zinc finger domain, 1B	protein-coding
common_peak1-18356-41-43-0.241717086211363-0.486454540233427	chr8	69973599	69975255	+	0	NA	Intergenic	Intergenic	-40230	NM_008673	17960	Mm.14125	NM_008673	ENSMUSG00000025588	Nat1	Nat-1	N-acetyl transferase 1	protein-coding
unique_peak2-34217-5-8--0.874305337448166-1.10484139239135	chr13	48513097	48513537	+	0	NA	Intergenic	Intergenic	95462	NM_001164575	67911	Mm.251375	NM_026450	ENSMUSG00000050954	Zfp169	1700025J14Rik|4930429A13Rik|BE688704	zinc finger protein 169	protein-coding
unique_peak1-2818-11-3-1.50869358425161-1.95434855131066	chr17	26535483	26536000	+	0	NA	Intergenic	Intergenic	-16169	NM_001081656	240055	Mm.133211	NM_001081656	ENSMUSG00000034413	Neurl1b	C230078M08Rik|EG240055	neuralized homolog 1b (Drosophila)	protein-coding
common_peak2-22443-23-15-0.721767504509081-0.949797625454541	chr13	40916075	40916945	+	0	NA	Intergenic	MuLV-int|LTR|ERV1	-38627	NM_023887	14538	Mm.314757	NM_008105	ENSMUSG00000021360	Gcnt2	5330430K10Rik|IGnT|IGnTA|IGnTB|IGnTC	glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	protein-coding
common_peak2-30474-11-7-0.508693584251613-1.21681515183528	chr7	48917020	48917331	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-6209	NR_004441	75835	Mm.159597	NM_029460	ENSMUSG00000074164	Vmn2r-ps54	1700108E19Rik|4930562N12Rik|Casr-rs5|ENSMUSG00000078527|Gm10948|Gprc2a-rs5	vomeronasal 2, receptor, pseudogene 54	pseudo
common_peak2-29367-17-27--0.589058583852566-0.604689589251113	chr5	151367446	151368479	+	0	NA	intron (NM_001081001, intron 24 of 26)	RMER6C|LTR|ERVK	29138	NM_133898	100637	Mm.279932	NM_133898	ENSMUSG00000041132	N4bp2l1	2410024N18Rik|AI428195|B230342M21Rik	NEDD4 binding protein 2-like 1	protein-coding
common_peak2-29557-14-10-0.439784541720347-0.519648556297791	chr6	42691906	42692314	+	0	NA	Intergenic	Intergenic	-1928	NM_001011799	258016	Mm.377328	NM_001011799	ENSMUSG00000095831	Olfr453	MOR257-8P	olfactory receptor 453	protein-coding
common_peak1-8981-51-83--0.317393597176188-0.672333935078526	chr11	59162752	59164230	+	0	NA	Intergenic	Intergenic	25664	NM_001045521	216797	Mm.339586	NM_001045521	ENSMUSG00000049291	Prss38	Gm249|Mpn2	protease, serine 38	protein-coding
unique_peak1-1354-13-5-1.19350952991661-1.95509489018123	chr12	21425659	21426371	+	0	NA	Intergenic	Intergenic	-2718	NM_011739	22630	Mm.289630	NM_011739	ENSMUSG00000076432	Ywhaq	2700028P07Rik|AA409740|AU021156|R74690	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide	protein-coding
common_peak2-26713-11-14--0.398197011356905-0.379391706698377	chr2	129065756	129066313	+	0	NA	Intergenic	Intergenic	21329	NR_045838	329513	Mm.473529	NM_177847	ENSMUSG00000056738	A730036I17Rik	-	RIKEN cDNA A730036I17 gene	ncRNA
unique_peak2-34815-7-6--0.00826409175941478-0.97990265578305	chr15	74741361	74741792	+	0	NA	Intergenic	Intergenic	-29442	NM_025929	67038	Mm.154566	NM_025929	ENSMUSG00000063522	2010109I03Rik	-	RIKEN cDNA 2010109I03 gene	protein-coding
unique_peak2-38845-3-9--1.73591118484664-1.57096726280955	chr7	143691566	143692063	+	0	NA	Intergenic	Intergenic	-150716	NR_040459	330664	Mm.127762	NR_040459		C230079O03Rik	C230079O03	RIKEN cDNA C230079O03 gene	ncRNA
common_peak2-23703-5-7--0.704380336005853-1.01466476204226	chr15	89074930	89075355	+	0	NA	intron (NM_026813, intron 3 of 24)	B3|SINE|B2	33152	NM_027805	71474	Mm.184055	NM_026813	ENSMUSG00000036561	Ppp6r2	1110033O10Rik|8430411H09Rik|B230107H12Rik|Pp6r2|Saps2	protein phosphatase 6, regulatory subunit 2	protein-coding
unique_peak1-6455-10-2-1.77145284428761-2.09384600808989	chr7	100589709	100590306	+	0	NA	Intergenic	Intergenic	361618	NM_021427	58238	Mm.113787	NM_021427		Fam181b	A830059I20Rik|AB041569	family with sequence similarity 181, member B	protein-coding
unique_peak2-37753-7-15--1.20090916970181-0.947446088118041	chr5	112326313	112326763	+	0	NA	Intergenic	Intergenic	-135790	NR_045833	269683	Mm.136946	NM_207252	ENSMUSG00000085271	E130006D01Rik	Gm16018|Gm681|OTTMUSG00000029083	RIKEN cDNA E130006D01 gene	ncRNA
unique_peak2-36421-8-11--0.579740082773585-1.14218153353838	chr2	128444492	128445025	+	0	NA	intron (NM_008569, intron 45 of 47)	intron (NM_008569, intron 45 of 47)	68373	NM_008569	17222	Mm.277408	NM_008569	ENSMUSG00000014355	Anapc1	2610021O03Rik|AI047775|AI853536|AW547281|Apc1|Mcpr|tsg24	anaphase promoting complex subunit 1	protein-coding
unique_peak2-32820-1-7--2.62705701021674-1.80617997398389	chr1	186568303	186568772	+	0	NA	Intergenic	Intergenic	-12165	NM_008250	15284	Mm.1347	NM_008250	ENSMUSG00000039377	Hlx	Hlx1	H2.0-like homeobox	protein-coding
unique_peak2-32899-3-8--1.58390809140159-1.39487600375387	chr10	18407571	18408018	+	0	NA	intron (NM_001033258, intron 4 of 33)	intron (NM_001033258, intron 4 of 33)	55770	NM_001033258	215821	Mm.40491	NM_001033258	ENSMUSG00000019852	D10Bwg1379e	9630004D11|Arfgef3|B930094H20Rik|mKIAA1244	DNA segment, Chr 10, Brigham & Women's Genetics 1379 expressed	protein-coding
common_peak1-18354-21-18-0.32156175182265-0.48779450977742	chr8	69900959	69901943	+	0	NA	Intergenic	Intergenic	-113206	NM_008673	17960	Mm.14125	NM_008673	ENSMUSG00000025588	Nat1	Nat-1	N-acetyl transferase 1	protein-coding
unique_peak2-39184-2-7--1.91745425626332-1.45399745587252	chr8	95214046	95214444	+	0	NA	Intergenic	Intergenic	16057	NM_001301137	64379	Mm.137247	NM_022428		Irx6	-	Iroquois related homeobox 6 (Drosophila)	protein-coding
common_peak1-8612-23-26--0.0331199976543877-0.301029995663988	chr10	116266239	116266938	+	0	NA	intron (NM_001033333, intron 9 of 24)	intron (NM_001033333, intron 9 of 24)	67347	NM_001033333	237558	Mm.336386	NM_001033333	ENSMUSG00000034057	Myrfl	Gm239	myelin regulatory factor-like	protein-coding
common_peak1-13420-17-12-0.517856620063946-0.647240723060192	chr19	53531242	53532030	+	0	NA	intron (NR_028427, intron 2 of 9)	RLTR14|LTR|ERV1	7650	NR_028427	381232	Mm.248624	NR_028427	ENSMUSG00000097636	5830416P10Rik	4833407H14Rik|5430437C04Rik|ENSMUSG00000074788|Gm10758	RIKEN cDNA 5830416P10 gene	ncRNA
unique_peak2-38619-2-5--1.50241675698448-1.08602067057793	chr7	80374267	80374659	+	0	NA	Intergenic	B1_Mur3|SINE|Alu	-80803	NR_105062	100505025	Mm.445959	NR_105062		LOC100505025	-	uncharacterized LOC100505025	ncRNA
common_peak2-22039-96-40-1.80849920973724-13.8506682789163	chr12	69361171	69362236	+	0	NA	Intergenic	URR1A|DNA|MER1_type	-591445	NR_033146	100316870	Mm.379794	NR_033146		Gm17821	-	DDB1 and CUL4 associated factor 5 pseudogene	pseudo
common_peak1-19356-9-6-0.382258484346616-1.11707584880836	chrX	12587181	12587660	+	0	NA	Intergenic	PB1D10|SINE|Alu	-31721	NR_038158	70489	Mm.383563	NR_038158	ENSMUSG00000087424	5730405O15Rik	-	RIKEN cDNA 5730405O15 gene	ncRNA
common_peak1-12301-12-9-0.326847890200276-0.459837087125828	chr17	46673770	46674336	+	0	NA	intron (NM_001081335, intron 8 of 40)	intron (NM_001081335, intron 8 of 40)	9284	NM_001081335	78309	Mm.329076	NM_001081335	ENSMUSG00000040327	Cul9	1810035I07Rik|Cul-9|Parc|mKIAA0708	cullin 9	protein-coding
unique_peak1-761-8-5-0.420259917226415-1.10484139239135	chr10	121429871	121430364	+	0	NA	intron (NM_001242411, intron 1 of 21)	intron (NM_001242411, intron 1 of 21)	54254	NM_001242411	117600	Mm.288698	NM_001081037	ENSMUSG00000020121	Srgap1	4930572H05Rik|Arhgap13	SLIT-ROBO Rho GTPase activating protein 1	protein-coding
common_peak1-17874-19-11-0.81772482594053-0.991115276827166	chr7	116200800	116201589	+	0	NA	intron (NM_001038624, intron 2 of 5)	intron (NM_001038624, intron 2 of 5)	25644	NM_001038624	320360	Mm.71007	NM_178780	ENSMUSG00000048330	Ric3	E130307J04Rik	resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	protein-coding
unique_peak1-6165-8-6-0.197867495889966-1.03789460276074	chr6	142760672	142761179	+	0	NA	Intergenic	Intergenic	-1826	NR_045707	665037	Mm.401493	NR_045707	ENSMUSG00000072683	Gm7457	EG665037|ENSMUSG00000072683	predicted gene 7457	ncRNA
unique_peak1-3033-17-8-1.04837133676273-1.30305656033811	chr18	61636383	61637200	+	0	NA	intron (NR_045419, intron 1 of 3)	MTD|LTR|MaLR	7470	NR_045419	442846	Mm.417648	NR_045419		A530050N04Rik	-	RIKEN cDNA A530050N04 gene	ncRNA
common_peak1-15360-30-14-1.26278481388335-2.47671208917977	chr4	57844609	57845791	+	0	NA	Intergenic	Intergenic	-12920	NM_009649	11641	Mm.467752	NM_009649	ENSMUSG00000038729	Akap2	AA959716|AI649048|Akap-2|Akap-kl|B230340M18Rik|Prka2	A kinase (PRKA) anchor protein 2	protein-coding
common_peak1-13659-45-62--0.116921898155045-0.329988325168877	chr2	26963925	26964978	+	0	NA	TTS (NM_029981)	TTS (NM_029981)	29550	NM_029981	77794	Mm.330088	NM_029981	ENSMUSG00000036040	Adamtsl2	A930008K15Rik|tcp-1	ADAMTS-like 2	protein-coding
common_peak1-13656-24-20-0.400892479988956-0.591915184368645	chr2	26915630	26916768	+	0	NA	TTS (NM_025376)	TTS (NM_025376)	7189	NM_001159602	66139	Mm.330087	NM_025376	ENSMUSG00000009214	Tmem8c	1110002H13Rik|AI131587	transmembrane protein 8C	protein-coding
common_peak1-11265-72-67-0.581120971621979-1.88647548383689	chr15	81399068	81400633	+	0	NA	Intergenic	B3|SINE|B2	-16794	NM_177821	328572	Mm.258397	NM_177821	ENSMUSG00000055024	Ep300	A430090G16|A730011L11|KAT3B|p300|p300 HAT	E1A binding protein p300	protein-coding
unique_peak2-32672-0-7--3.84013093047421-1.80617997398389	chr1	135820703	135821031	+	0	NA	Intergenic	Intergenic	-2889	NM_054077	116847	Mm.214514	NM_054077	ENSMUSG00000041577	Prelp	7330409J17Rik|SLRR2A	proline arginine-rich end leucine-rich repeat	protein-coding
common_peak1-18783-158-294--0.173634479772611-0.701176932161209	chr8	128684841	128686632	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-136743	NM_175434	210027	Mm.405238	NM_175434	ENSMUSG00000057060	Slc35f3	B230375D17Rik	solute carrier family 35, member F3	protein-coding
common_peak1-8625-10-8-0.186490343566457-1.078512453669	chr10	117906189	117906720	+	0	NA	Intergenic	Intergenic	28351	NM_008337	15978	Mm.240327	NM_008337	ENSMUSG00000055170	Ifng	IFN-g|Ifg	interferon gamma	protein-coding
unique_peak1-4088-15-3-2.01216475055566-3.03427613622886	chr2	71719240	71720041	+	0	NA	intron (NM_172665, intron 3 of 10)	intron (NM_172665, intron 3 of 10)	8359	NM_172665	228026	Mm.34411	NM_172665	ENSMUSG00000006494	Pdk1	B830012B01|D530020C15Rik	pyruvate dehydrogenase kinase, isoenzyme 1	protein-coding
unique_peak2-38501-6-6--0.241956811677302-0.947717972411649	chr7	38230103	38230497	+	0	NA	Intergenic	Intergenic	324471	NM_172385	243937	Mm.322505	NM_172385	ENSMUSG00000043456	Zfp536	9630010P11Rik|Znf536|mKIAA0390	zinc finger protein 536	protein-coding
common_peak2-31518-18-19--0.00900894365901106-0.306598483909153	chr8	108896700	108897189	+	0	NA	Intergenic	Intergenic	-35056	NM_021491	58994	Mm.23298	NM_021491	ENSMUSG00000031906	Smpd3	4631433G07Rik|AI427456|AW537966|fro|nSMase2	sphingomyelin phosphodiesterase 3, neutral	protein-coding
unique_peak1-6786-5-2-0.710657163272991-1.08602067057793	chr8	68201474	68201977	+	0	NA	intron (NM_175188, intron 1 of 7)	intron (NM_175188, intron 1 of 7)	59301	NM_175188	72925	Mm.380457	NM_175188	ENSMUSG00000036469	March1	2900024D24Rik|BB085186	membrane-associated ring finger (C3HC4) 1	protein-coding
unique_peak1-5310-10-5-0.771452844287613-1.33892459842472	chr5	76369155	76369684	+	0	NA	intron (NM_010612, intron 2 of 29)	intron (NM_010612, intron 2 of 29)	5034	NM_010612	16542	Mm.285	NM_010612	ENSMUSG00000062960	Kdr	6130401C07|Flk-1|Flk1|Krd-1|Ly73|VEGFR-2|VEGFR2|sVEGFR-2	kinase insert domain protein receptor	protein-coding
common_peak2-27489-2-6--1.72480917832092-1.26211192963361	chr3	94719387	94719807	+	0	NA	Intergenic	Intergenic	-17408	NM_009150	20341	Mm.196558	NM_009150	ENSMUSG00000068874	Selenbp1	Lp56|Lpsb|SBP56	selenium binding protein 1	protein-coding
unique_peak2-39172-4-8--1.19338551529556-1.21878474469819	chr8	94715030	94715376	+	0	NA	Intergenic	Intergenic	164816	NR_110452	71296	Mm.86664	NR_033641	ENSMUSG00000031736	Crnde	4933436C20Rik	colorectal neoplasia differentially expressed (non-protein coding)	ncRNA
unique_peak1-7077-7-2-1.21412832957703-1.45399745587252	chr9	21011342	21011857	+	0	NA	intron (NM_019798, intron 9 of 9)	intron (NM_019798, intron 9 of 9)	10450	NM_019798	18577	Mm.191749	NM_019798	ENSMUSG00000032177	Pde4a	D9Ertd60e|Dpde2	phosphodiesterase 4A, cAMP specific	protein-coding
common_peak1-16597-10-14--0.550475250599749-0.446472590016315	chr5	149184502	149185047	+	0	NA	intron (NM_007513, intron 1 of 12)	intron (NM_007513, intron 1 of 12)	26706	NM_007513	11987	Mm.275489	NM_007513	ENSMUSG00000041313	Slc7a1	4831426K01Rik|AI447493|Atrc-1|Atrc1|Cat1|Rec-1|Rev-1|mCAT-1	solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	protein-coding
common_peak1-16878-10-8-0.186490343566457-1.078512453669	chr6	67106186	67106700	+	0	NA	Intergenic	Intergenic	-110530	NM_001113564	66870	Mm.240490	NM_025814	ENSMUSG00000036371	Serbp1	1200009K13Rik|9330147J08Rik|AL022786|Pairbp1	serpine1 mRNA binding protein 1	protein-coding
common_peak2-20055-10-11--0.228547155712387-0.31137425193576	chr1	151343921	151344405	+	0	NA	Intergenic	L1Md_T|LINE|L1	464251	NM_008869	18783	Mm.4186	NM_008869	ENSMUSG00000056220	Pla2g4a	Pla2g4|cPLA2|cPLA2alpha	phospholipase A2, group IVA (cytosolic, calcium-dependent)	protein-coding
common_peak2-32277-17-22--0.305265617851975-0.348739088570342	chrX	13845961	13846794	+	0	NA	Intergenic	Intergenic	58103	NM_001034100	385328	Mm.275681	NM_001034100	ENSMUSG00000061065	Gm5382	EG385328	predicted gene 5382	protein-coding
unique_peak2-36737-6-10--0.894033508256995-1.21398586181642	chr3	57409094	57409473	+	0	NA	Intergenic	B3|SINE|B2	-29451	NM_001168281	97064	Mm.405029	NM_133784	ENSMUSG00000027803	Wwtr1	2310058J06Rik|2610021I22Rik|C78399|Taz	WW domain containing transcription regulator 1	protein-coding
common_peak2-24968-13-31--1.22152796936223-1.73082168901047	chr18	5989196	5990120	+	0	NA	Intergenic	Intergenic	146438	NM_029277	75415	Mm.239675	NM_029277	ENSMUSG00000041225	Arhgap12	2810011M08Rik	Rho GTPase activating protein 12	protein-coding
unique_peak1-7262-11-1-2.50869358425161-2.83420869758413	chr9	92248720	92249350	+	0	NA	intron (NM_001033184, intron 5 of 6)	intron (NM_001033184, intron 5 of 6)	44820	NM_001033184	78459	Mm.179195	NM_001033184	ENSMUSG00000074139	1700057G04Rik	-	RIKEN cDNA 1700057G04 gene	protein-coding
common_peak1-12440-26-12-1.22745937401737-2.03163221100073	chr17	79599350	79600526	+	0	NA	Intergenic	Intergenic	148692	NM_027455	70536	Mm.293870	NM_027455	ENSMUSG00000024084	Qpct	5730422A13Rik	glutaminyl-peptide cyclotransferase (glutaminyl cyclase)	protein-coding
common_peak1-13530-65-36-1.28271257384818-5.49283664167423	chr2	157203431	157205413	+	0	NA	intron (NM_026968, intron 1 of 2)	ID_B1|SINE|B4	11092	NM_026968	69161	Mm.228619	NM_026968	ENSMUSG00000063019	Manbal	1810024K12Rik|AI836500	mannosidase, beta A, lysosomal-like	protein-coding
unique_peak1-7406-20-9-1.16614668970383-1.52222891542741	chrX	126769472	126770158	+	0	NA	intron (NM_172493, intron 23 of 26)	intron (NM_172493, intron 23 of 26)	485537	NM_172493	54004	Mm.10763	NM_017398	ENSMUSG00000034480	Diap2	Dia3|Diaph2|Drf2|E430022I22Rik	diaphanous homolog 2 (Drosophila)	protein-coding
unique_peak1-413-20-4-2.16614668970383-3.28004177908661	chr1	159594783	159595790	+	0	NA	Intergenic	L1Md_F3|LINE|L1	138985	NM_001159986	89867	Mm.87114	NM_033354	ENSMUSG00000026589	Sec16b	Lztr2|Rgpr|Rgpr-p117	SEC16 homolog B (S. cerevisiae)	protein-coding
common_peak1-19021-11-13--0.298661337805991-0.337263207250336	chr9	63721176	63721766	+	0	NA	Intergenic	(CAAAA)n|Simple_repeat|Simple_repeat	-115670	NM_016769	17127	Mm.7320	NM_016769	ENSMUSG00000032402	Smad3	AU022421|Madh3	SMAD family member 3	protein-coding
common_peak2-31743-12-13--0.158578936969966-0.301029995663979	chr9	15357300	15357763	+	0	NA	Intergenic	Intergenic	47592	NM_133214	170748	Mm.86572	NM_133214	ENSMUSG00000058173	Smco4	Fn5	single-pass membrane protein with coiled-coil domains 4	protein-coding
common_peak2-25264-9-5-0.604650905683064-1.21398586181642	chr18	67464964	67465299	+	0	NA	intron (NM_053261, intron 2 of 7)	B3|SINE|B2	16254	NM_053261	114663	Mm.34079	NM_053261	ENSMUSG00000024525	Impa2	2210415D20Rik|AI326924|AW259601	inositol (myo)-1(or 4)-monophosphatase 2	protein-coding
unique_peak2-38487-2-6--1.72480917832092-1.26211192963361	chr7	34168687	34169076	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	10628	NM_001270543	545948	Mm.349644	NM_001270543		Scgb1b20	EG545948|Gm5895	secretoglobin, family 1B, member 20	protein-coding
common_peak2-26754-26-28-0.0699180970308904-0.316008636696532	chr2	137115035	137116383	+	0	NA	Intergenic	Intergenic	-173453	NM_013822	16449	Mm.22398	NM_013822	ENSMUSG00000027276	Jag1	ABE2|Gsfabe2|Htu|Ozz|Ser-1	jagged 1	protein-coding
unique_peak2-38769-2-7--1.91745425626332-1.45399745587252	chr7	126884294	126884627	+	0	NA	Intergenic	Intergenic	-19977	NM_212441	20216	Mm.334199	NM_016870	ENSMUSG00000030935	Acsm3	Sa|Sah	acyl-CoA synthetase medium-chain family member 3	protein-coding
common_peak2-20186-11-6-0.701338662194009-1.32595962126035	chr1	172311872	172312285	+	0	NA	intron (NM_027528, intron 3 of 7)	intron (NM_027528, intron 3 of 7)	73086	NM_001039593	76925	Mm.33631	NM_001039593	ENSMUSG00000042800	1700015E13Rik	-	RIKEN cDNA 1700015E13 gene	protein-coding
common_peak2-25436-12-10-0.189344366450341-0.386243247519795	chr19	3913191	3913755	+	0	NA	promoter-TSS (NM_001271444)	promoter-TSS (NM_001271444)	-699	NM_001271444	225887	Mm.44227	NM_144870	ENSMUSG00000059734	Ndufs8	BC021616|CI-23kD|TYKY	NADH dehydrogenase (ubiquinone) Fe-S protein 8	protein-coding
common_peak2-26568-3-5--0.998945590680433-0.96108193396963	chr2	103295802	103296082	+	0	NA	intron (NM_009804, intron 11 of 12)	MER21B|LTR|ERV1	29368	NM_009804	12359	Mm.4215	NM_009804	ENSMUSG00000027187	Cat	2210418N07|Cas-1|Cas1|Cs-1	catalase	protein-coding
unique_peak2-33779-3-9--1.73591118484664-1.57096726280955	chr11	119086379	119086894	+	0	NA	intron (NM_172443, intron 1 of 11)	intron (NM_172443, intron 1 of 11)	3177	NM_172443	207592	Mm.205263	NM_172443	ENSMUSG00000039976	Tbc1d16	B930087K01|BC026530|Tcd1d16	TBC1 domain family, member 16	protein-coding
common_peak1-11812-22-23-0.0623216043662485-0.319130838712456	chr16	64851295	64851929	+	0	NA	promoter-TSS (NM_178647)	promoter-TSS (NM_178647)	-299	NM_178647	106143	Mm.10160	NM_178647	ENSMUSG00000054604	Cggbp1	AA960172|AL023996|AW045841	CGG triplet repeat binding protein 1	protein-coding
common_peak2-21865-20-21-0.0286431659538957-0.306080386793804	chr12	54312817	54313787	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-36362	NM_013780	27386	Mm.247044	NM_013780	ENSMUSG00000021010	Npas3	4930423H22Rik|bHLHe12	neuronal PAS domain protein 3	protein-coding
common_peak1-12863-46-52-0.170075488685603-0.425219862997731	chr18	75493551	75495561	+	0	NA	Intergenic	Intergenic	-32463	NM_001042660	17131	Mm.34407	NM_008543	ENSMUSG00000025880	Smad7	Madh7	SMAD family member 7	protein-coding
unique_peak1-948-8-4-0.683294323060208-1.21878474469819	chr11	57683846	57684365	+	0	NA	Intergenic	Intergenic	-38456	NM_008213	15110	Mm.4746	NM_008213	ENSMUSG00000037335	Hand1	Ehand1|Hxt|Th1|Thing1|bHLHa27|eHAND	heart and neural crest derivatives expressed transcript 1	protein-coding
unique_peak2-35806-5-8--0.874305337448166-1.10484139239135	chr18	61278579	61279097	+	0	NA	intron (NM_001037859, intron 11 of 21)	intron (NM_001037859, intron 11 of 21)	1716	NR_105949	102466212		NR_105949		Mir6983	mmu-mir-6983	microRNA mir-6983	ncRNA
common_peak1-19428-21-25--0.130950452874856-0.305461879681376	chrX	75833252	75834265	+	0	NA	Intergenic	Intergenic	-4522	NM_027322	546336	Mm.211712	NM_027322	ENSMUSG00000047996	Prrg1	2010007L08Rik	proline rich Gla (G-carboxyglutamic acid) 1	protein-coding
common_peak2-24579-16-25--0.58217607587303-0.633951497070961	chr17	31295828	31296784	+	0	NA	intron (NR_110502, intron 4 of 5).2	ORR1B1|LTR|MaLR	5692	NM_009362	21784	Mm.2854	NM_009362	ENSMUSG00000024032	Tff1	Bcei|PS2	trefoil factor 1	protein-coding
unique_peak1-2766-8-4-0.683294323060208-1.21878474469819	chr17	5984335	5984868	+	0	NA	intron (NM_001113352, intron 2 of 25)	intron (NM_001113352, intron 2 of 25)	9015	NM_011523	20975	Mm.236068	NM_011523	ENSMUSG00000023805	Synj2	AI481647|SJ2|mKIAA0348	synaptojanin 2	protein-coding
common_peak2-32241-11-18--0.739233929191972-0.671582559449692	chrX	70385023	70385752	+	0	NA	intron (NM_001025383, intron 3 of 3).2	intron (NM_001025383, intron 3 of 3).2	3376	NM_001025383	574404	Mm.481740	NM_001025383	ENSMUSG00000067771	Gm14685	-	predicted gene 14685	protein-coding
unique_peak1-1871-25-0-4.86184990534511-NA	chr14	57083790	57084947	+	0	NA	intron (NM_001033043, intron 14 of 36)	intron (NM_001033043, intron 14 of 36)	62834	NM_001033043	30054	Mm.287783	NM_001033043	ENSMUSG00000000365	Rnf17	MMIP-2|Mmip2|TDRD4	ring finger protein 17	protein-coding
common_peak1-17696-45-33-0.772895184094533-1.81177654248742	chr7	73536983	73538857	+	0	NA	intron (NM_053080, intron 12 of 12)	intron (NM_053080, intron 12 of 12)	-4693	NM_146191	233328	Mm.33284	NM_146191	ENSMUSG00000015133	Lrrk1	AW319595|C230002E15Rik|D130026O16Rik|mKIAA1790	leucine-rich repeat kinase 1	protein-coding
unique_peak1-5741-8-3-1.00522241794757-1.39487600375387	chr6	47494595	47495148	+	0	NA	intron (NM_001146689, intron 10 of 19)	B4|SINE|B4	50158	NM_007971	14056	Mm.246688	NM_007971	ENSMUSG00000029687	Ezh2	Enx-1|Enx1h|KMT6|mKIAA4065	enhancer of zeste homolog 2 (Drosophila)	protein-coding
unique_peak1-5989-11-2-1.92373108353046-2.32232533660526	chr6	99142746	99143364	+	0	NA	intron (NM_053202, intron 3 of 18)	(A)n|Simple_repeat|Simple_repeat	73454	NM_001197321	108655	Mm.234965	NM_053202	ENSMUSG00000030067	Foxp1	3110052D19Rik|4932443N09Rik|AI461938|AW494214	forkhead box P1	protein-coding
common_peak2-23736-56-15-2.23559582543924-9.78286739609578	chr15	97247177	97247862	+	0	NA	Intergenic	Intergenic	-169801	NM_001164602	105827	Mm.24005	NM_178114	ENSMUSG00000048218	Amigo2	AI415330|AMIGO-2|AW208913|Ali1	adhesion molecule with Ig like domain 2	protein-coding
unique_peak1-644-9-5-0.604650905683064-1.21398586181642	chr10	43980582	43981119	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-7314	NM_053069	11793	Mm.22264	NM_053069	ENSMUSG00000038160	Atg5	2010107M05Rik|3110067M24Rik|AW319544|Apg5l|Atg5l|C88337|Paddy	autophagy related 5	protein-coding
unique_peak1-2203-11-4-1.18676548936425-1.68134727924692	chr15	67134851	67135570	+	0	NA	intron (NR_045140, intron 5 of 8)	intron (NR_045140, intron 5 of 8)	76879	NR_045140	69334	Mm.63770	NR_045140		1700012I11Rik	-	RIKEN cDNA 1700012I11 gene	ncRNA
common_peak2-22204-26-41--0.464418330620298-0.672592695851323	chr12	111165952	111167245	+	0	NA	Intergenic	B3A|SINE|B2	180510	NR_037233	100499517		NR_037233	miRBase:MI0014035	Mir3072	mmu-mir-3072	microRNA 3072	ncRNA
common_peak1-9848-32-59--0.627798576388859-1.19360251378961	chr12	79172131	79173140	+	0	NA	Intergenic	ORR1C2|LTR|MaLR	-155007	NM_172952	268566	Mm.341742	NM_145965	ENSMUSG00000047454	Gphn	5730552E08Rik|AI662856|BC027112|C230040D23|GPH|GPHRYN|geph	gephyrin	protein-coding
common_peak2-27836-11-11--0.0762689164695427-0.301029995663976	chr3	151351281	151351753	+	0	NA	Intergenic	L1Md_F3|LINE|L1	61406	NM_133871	99899	Mm.30756	NM_133871	ENSMUSG00000028037	Ifi44	A430056A10Rik|AW261460|MTAP44|p44	interferon-induced protein 44	protein-coding
common_peak1-11459-87-114-0.150147054836794-0.476999546368067	chr15	101369486	101371466	+	0	NA	intron (NM_016879, intron 2 of 3)	intron (NM_016879, intron 2 of 3)	-7225	NM_008474	16680	Mm.25292	NM_008474	ENSMUSG00000044294	Krt84	AV235125|HRb-1|Krt2-16|Krt2-3	keratin 84	protein-coding
common_peak2-31612-7-13--1.00826409175941-0.697979855752659	chr8	122611643	122612040	+	0	NA	exon (NM_133967, exon 3 of 8)	exon (NM_133967, exon 3 of 8)	13531	NM_133967	102193	Mm.240076	NM_133967	ENSMUSG00000031823	Zdhhc7	AL024087|Gramp2	zinc finger, DHHC domain containing 7	protein-coding
unique_peak1-2200-8-5-0.420259917226415-1.10484139239135	chr15	66861847	66862340	+	0	NA	Intergenic	Intergenic	-60890	NM_008681	17988	Mm.30837	NM_008681	ENSMUSG00000005125	Ndrg1	CAP43|CMT4D|DRG1|HMSNL|NMSL|Ndr1|Ndrl|PROXY1|RTP|TDD5	N-myc downstream regulated gene 1	protein-coding
common_peak2-30552-163-294--0.119447620983172-0.486764527391909	chr7	73616693	73619456	+	0	NA	Intergenic	ORR1D2|LTR|MaLR	-45711	NM_053080	56847	Mm.140988	NM_053080	ENSMUSG00000015134	Aldh1a3	ALDH6|RALDH3|V1	aldehyde dehydrogenase family 1, subfamily A3	protein-coding
unique_peak1-2800-11-3-1.50869358425161-1.95434855131066	chr17	15440558	15441102	+	0	NA	Intergenic	RLTR10|LTR|ERVK	50595	NR_033511	100038481	Mm.387544	NR_033511		Gm10510	ENSMUSG00000073453	predicted gene 10510	ncRNA
unique_peak2-39874-1-8--2.79698201165906-2.05605744720049	chrX	74248831	74249439	+	0	NA	Intergenic	Intergenic	-400872	NM_001201395	74987	Mm.107996	NM_001201395	ENSMUSG00000079525	4930468A15Rik	-	RIKEN cDNA 4930468A15 gene	protein-coding
unique_peak1-6966-14-4-1.57728806547028-2.4322161449009	chr8	117261301	117262009	+	0	NA	intron (NM_019573, intron 8 of 8)	intron (NM_019573, intron 8 of 8)	298103	NM_019573	80707	Mm.440420	NM_019573	ENSMUSG00000004637	Wwox	5330426P09Rik|9030416C10Rik|WOX1	WW domain-containing oxidoreductase	protein-coding
common_peak2-20473-5-4--0.0263084308932156-0.909929411522249	chr10	44002446	44002855	+	0	NA	intron (NM_053069, intron 1 of 7)	Lx7|LINE|L1	14486	NM_053069	11793	Mm.22264	NM_053069	ENSMUSG00000038160	Atg5	2010107M05Rik|3110067M24Rik|AW319544|Apg5l|Atg5l|C88337|Paddy	autophagy related 5	protein-coding
common_peak1-17695-10-14--0.550475250599749-0.446472590016315	chr7	72096461	72097051	+	0	NA	intron (NM_183087, intron 2 of 9)	L1M3|LINE|L1	-78830	NM_023239	66647	Mm.19944	NM_023239		Ndnl2	5730494G16Rik|AI642138|BB044375|HCA4|Mageg1|mage-g1	necdin-like 2	protein-coding
unique_peak2-35606-10-11--0.228547155712387-0.31137425193576	chr17	82377219	82377733	+	0	NA	Intergenic	Intergenic	-239749	NM_011406	20541	Mm.265834	NM_011406		Slc8a1	AI852629|AV344025|D930008O12Rik|Ncx1	solute carrier family 8 (sodium/calcium exchanger), member 1	protein-coding
common_peak2-31162-10-11--0.228547155712387-0.31137425193576	chr8	45562153	45562809	+	0	NA	Intergenic	Intergenic	-473081	NM_001081286	14107	Mm.27365	NM_001081286	ENSMUSG00000070047	Fat1	2310038E12Rik|AU023433|Fath|mFat1	FAT tumor suppressor homolog 1 (Drosophila)	protein-coding
common_peak2-31115-48-47-0.385964650513658-0.808188089851521	chr8	33659611	33661145	+	0	NA	Intergenic	Intergenic	398011	NR_046039	666589	Mm.367675	NR_046039		Gm8179	EG666589	predicted gene 8179	ncRNA
unique_peak2-34021-3-4--0.73591118484664-0.864171920961574	chr12	106010293	106010713	+	0	NA	intron (NR_104436, intron 13 of 13)	intron (NR_104436, intron 13 of 13)	-20341	NM_148948	192119	Mm.21135	NM_148948	ENSMUSG00000041415	Dicer1	1110006F08Rik|D12Ertd7e|mKIAA0928	dicer 1, ribonuclease type III	protein-coding
common_peak1-15762-21-29--0.337401330342283-0.403610417161439	chr4	150854827	150855892	+	0	NA	intron (NM_001081557, intron 4 of 23)	L1ME2z|LINE|L1	380518	NM_001081557	100072	Mm.318846	NM_001081557	ENSMUSG00000014592	Camta1	1810059M14Rik|2310058O09Rik|AI316882|AW987475|mKIAA0833	calmodulin binding transcription activator 1	protein-coding
common_peak1-7525-30-31-0.169675409491873-0.382130460680153	chr1	33657622	33658559	+	0	NA	intron (NM_008922, intron 7 of 13)	RLTR10C|LTR|ERVK	68549	NM_008922	19076	Mm.27705	NM_008922	ENSMUSG00000026134	Prim2	AI323589	DNA primase, p58 subunit	protein-coding
common_peak1-9482-12-9-0.326847890200276-0.459837087125828	chr11	106778991	106779624	+	0	NA	intron (NM_025481, intron 1 of 18)	RSINE1|SINE|B4	2722	NM_025481	66313	Mm.340955	NM_025481	ENSMUSG00000018363	Smurf2	2810411E22Rik|AI558114|AI649275	SMAD specific E3 ubiquitin protein ligase 2	protein-coding
unique_peak1-3372-17-4-1.89636824331768-2.60953805094651	chr19	3344689	3345527	+	0	NA	intron (NM_013495, intron 1 of 18)	intron (NM_013495, intron 1 of 18)	21807	NM_013495	12894	Mm.18522	NM_013495	ENSMUSG00000024900	Cpt1a	C730027G07|CPTI|Cpt1	carnitine palmitoyltransferase 1a, liver	protein-coding
common_peak1-19382-18-34--0.816363865716615-1.09826982379496	chrX	38455649	38456586	+	0	NA	Intergenic	Lx9|LINE|L1	-298361	NM_016886	53623	Mm.327681	NM_016886	ENSMUSG00000001986	Gria3	2900064I19Rik|GluA3|GluR-C|GluR-K3|Glur-3|Glur3|Gluralpha3	glutamate receptor, ionotropic, AMPA3 (alpha 3)	protein-coding
common_peak2-31753-5-14--1.61127093161437-1.95509489018123	chr9	20642892	20643182	+	0	NA	Intergenic	PB1D9|SINE|Alu	20089	NM_001030290	235033	Mm.297661	NM_001030290	ENSMUSG00000053773	Rdh8	Gm182|prRDH	retinol dehydrogenase 8	protein-coding
common_peak1-7576-9-6-0.382258484346616-1.11707584880836	chr1	51289997	51290476	+	0	NA	intron (NR_045151, intron 4 of 4)	Lx|LINE|L1	-55734	NM_138741	20324	Mm.398690	NM_138741	ENSMUSG00000045954	Sdpr	-	serum deprivation response	protein-coding
common_peak2-24479-26-51--0.77254062598263-1.49688973786043	chr17	24669135	24670422	+	0	NA	intron (NM_177375, intron 1 of 8)	intron (NM_177375, intron 1 of 8)	914	NM_177375	328778	Mm.266033	NM_177375	ENSMUSG00000079657	Rab26	A830020M03Rik	RAB26, member RAS oncogene family	protein-coding
unique_peak1-6494-10-6-0.549060422951165-1.21398586181642	chr7	113435460	113435989	+	0	NA	Intergenic	L1Md_F2|LINE|L1	32318	NR_030720	668128	Mm.484022	NR_030720		Gm8989	EG668128|Gm21911	very large inducible GTPase 1 pseudogene	pseudo
unique_peak2-36622-10-17--0.813509656433543-0.699649909729472	chr3	69221592	69222492	+	0	NA	intron (NM_178726, intron 1 of 3)	(TG)n|Simple_repeat|Simple_repeat	101202	NM_178726	242083	Mm.40577	NM_178726		Ppm1l	3222401G13|5930404J21Rik|AI481720|AW045850|PP2C|PP2Cepsilon|Pp2ce|Ppp2ce|mKIAA4175	protein phosphatase 1 (formerly 2C)-like	protein-coding
common_peak1-10484-12-15--0.351224014912361-0.332077462497413	chr13	116619387	116619977	+	0	NA	Intergenic	B1_Mur4|SINE|Alu	480214	NM_021459	16392	Mm.42242	NM_021459	ENSMUSG00000042258	Isl1	-	ISL1 transcription factor, LIM/homeodomain	protein-coding
common_peak1-13727-56-61-0.281399515052368-0.614532557650135	chr2	31759438	31760561	+	0	NA	intron (NM_011836, intron 4 of 27)	intron (NM_011836, intron 4 of 27)	17198	NM_011836	23928	Mm.302362	NM_011836	ENSMUSG00000026840	Lamc3	AI562206|AW240805	laminin gamma 3	protein-coding
unique_peak1-4900-8-6-0.197867495889966-1.03789460276074	chr4	45495540	45495962	+	0	NA	intron (NM_001033306, intron 2 of 5)	intron (NM_001033306, intron 2 of 5)	47949	NM_001033306	230126	Mm.251716	NM_001033306	ENSMUSG00000044813	Shb	BC028832	src homology 2 domain-containing transforming protein B	protein-coding
common_peak1-13010-112-76-1.16646375962538-8.72767034377872	chr19	4961577	4963020	+	0	NA	promoter-TSS (NM_025553)	promoter-TSS (NM_025553)	-8	NM_025553	66419	Mm.28494	NM_025553	ENSMUSG00000024902	Mrpl11	2410001P07Rik|L11mt	mitochondrial ribosomal protein L11	protein-coding
unique_peak1-2335-10-1-2.35641534500877-2.57096726280955	chr15	84238542	84239067	+	0	NA	intron (NM_001163145, intron 3 of 4)	intron (NM_001163145, intron 3 of 4)	38723	NM_001163145	72301	Mm.275387	NM_001163145	ENSMUSG00000062760	1810041L15Rik	Kiaa1644	RIKEN cDNA 1810041L15 gene	protein-coding
common_peak2-26583-18-13-0.505564229170747-0.625923329873571	chr2	106002788	106003278	+	0	NA	Intergenic	Intergenic	-159327	NR_033993	99349	Mm.25661	NM_026992	ENSMUSG00000027166	Dnajc24	1700030A21Rik|2610027M02Rik|AV066965|AW240712|Dph4|MmDjC7|Zcsl3	DnaJ (Hsp40) homolog, subfamily C, member 24	protein-coding
unique_peak2-38877-38-43-0.112021040661233-0.360715883817177	chr8	20561364	20562640	+	0	NA	Intergenic	Intergenic	-541610	NR_028428	381598	Mm.359054	NM_001024708	ENSMUSG00000071793	2610005L07Rik	2810038F24Rik|6720476A01Rik	cadherin 11 pseudogene	pseudo
unique_peak1-6056-20-7-1.48807478459119-2.07034318903805	chr6	115722400	115723236	+	0	NA	Intergenic	B3A|SINE|B2	-1757	NM_025958	67088	Mm.277683	NM_025958	ENSMUSG00000030319	Cand2	2210404G23Rik|Tp120b|mKIAA0667	cullin-associated and neddylation-dissociated 2 (putative)	protein-coding
unique_peak1-3678-15-7-1.01216475055566-1.08658567012551	chr19	42088978	42089809	+	0	NA	intron (NM_145500, intron 1 of 2)	intron (NM_145500, intron 1 of 2)	-21135	NM_020033	56642	Mm.143737	NM_020033	ENSMUSG00000025172	Ankrd2	Arpp|mArpp	ankyrin repeat domain 2 (stretch responsive muscle)	protein-coding
unique_peak2-36644-11-202--4.15664233293356-45.6118597045994	chr3	9249919	9251931	+	0	NA	5' UTR (NM_177660, exon 1 of 6)	5' UTR (NM_177660, exon 1 of 6)	358	NM_177660	229055	Mm.103262	NM_177660	ENSMUSG00000069114	Zbtb10	4832414A18|AU021107|RINZF	zinc finger and BTB domain containing 10	protein-coding
common_peak2-20335-51-70--0.0748232939021092-0.315296283155016	chr10	4387132	4388326	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-36412	NM_001161822	56533	Mm.44606	NM_019958	ENSMUSG00000019775	Rgs17	6430507P11Rik|Rgsz2	regulator of G-protein signaling 17	protein-coding
unique_peak2-39143-6-8--0.60452689106201-1.03789460276074	chr8	86624094	86624565	+	0	NA	intron (NM_172502, intron 6 of 12)	RSINE1|SINE|B4	4332	NM_172502	212123	Mm.260557	NM_172502	ENSMUSG00000037103	Dcaf15	6720484B16	DDB1 and CUL4 associated factor 15	protein-coding
common_peak2-20026-15-13-0.204809828498052-0.368541233333383	chr1	136136491	136137188	+	0	NA	Intergenic	Intergenic	-4805	NM_001008533	11539	Mm.298908	NM_009629	ENSMUSG00000042429	Adora1	A1-AR|A1AR|A1R|AA1R|AI848715|BB176431|Ri	adenosine A1 receptor	protein-coding
common_peak2-31650-13-7-0.778472030637769-0.817533494790411	chr8	126497135	126497557	+	0	NA	intron (NM_019552, intron 1 of 12)	intron (NM_019552, intron 1 of 12)	9676	NM_019552	56199	Mm.274243	NM_019552	ENSMUSG00000031974	Abcb10	Abc-me|Abcb12	ATP-binding cassette, sub-family B (MDR/TAP), member 10	protein-coding
unique_peak1-6578-10-3-1.35641534500877-1.75805390616669	chr7	141372947	141373534	+	0	NA	intron (NM_007400, intron 1 of 22)	intron (NM_007400, intron 1 of 22)	43540	NM_007400	11489	Mm.439714	NM_007400	ENSMUSG00000054555	Adam12	Mltna|mKIAA4001	a disintegrin and metallopeptidase domain 12 (meltrin alpha)	protein-coding
common_peak1-10793-11-11--0.0762689164695427-0.301029995663976	chr14	76521584	76522238	+	0	NA	intron (NM_013745, intron 5 of 9)	intron (NM_013745, intron 5 of 9)	11213	NM_013745	27275	Mm.21138	NM_013745	ENSMUSG00000022009	Nufip1	Nufip	nuclear fragile X mental retardation protein interacting protein 1	protein-coding
common_peak2-19737-31-31-0.225238670813123-0.416139936131877	chr1	74249056	74250166	+	0	NA	Intergenic	Intergenic	-8406	NM_178241	227288	Mm.337035	NM_178241	ENSMUSG00000048480	Cxcr1	Il8ra	chemokine (C-X-C motif) receptor 1	protein-coding
common_peak2-24780-20-12-0.787635066450101-0.949240599462708	chr17	62687208	62687954	+	0	NA	Intergenic	Intergenic	543085	NM_207654	13640	Mm.7978	NM_010109		Efna5	AL-1|AV158822|EFL-5|Ephrin-A5|Epl7|LERK-7|RAGS	ephrin A5	protein-coding
unique_peak1-4542-14-1-2.89921616035764-3.91338994363176	chr3	37762448	37763025	+	0	NA	Intergenic	Lx3C|LINE|L1	-34999	NR_040559	626410	Mm.389417	NR_040559		Gm20755	-	predicted gene, 20755	ncRNA
unique_peak1-95-7-2-1.21412832957703-1.45399745587252	chr1	51291376	51291891	+	0	NA	intron (NR_045151, intron 4 of 4)	Lx|LINE|L1	-54337	NM_138741	20324	Mm.398690	NM_138741	ENSMUSG00000045954	Sdpr	-	serum deprivation response	protein-coding
common_peak1-16575-47-56-0.101951410601806-0.347443112052874	chr5	146912509	146914393	+	0	NA	intron (NM_001105160, intron 9 of 12)	B3A|SINE|B2	22617	NM_001105160	100041449	Mm.301900	NM_001105160	ENSMUSG00000061292	Cyp3a59	ENSMUSG00000061292	cytochrome P450, family 3, subfamily a, polypeptide 59	protein-coding
common_peak1-14908-11-15--0.491306415748387-0.435191258261915	chr3	97226847	97227452	+	0	NA	Intergenic	MTD|LTR|MaLR	-12047	NM_146275	258272	Mm.377406	NM_146275	ENSMUSG00000051392	Olfr1402	MOR217-1	olfactory receptor 1402	protein-coding
unique_peak2-32689-2-5--1.50241675698448-1.08602067057793	chr1	139929364	139929664	+	0	NA	Intergenic	Intergenic	66298	NR_029820	723890		NR_029820	miRBase:MI0000723	Mir181b-1	Mirn181b-1	microRNA 181b-1	ncRNA
common_peak2-28129-39-94--0.954094361411794-3.42889217787834	chr4	95052355	95053467	+	0	NA	Intergenic	Intergenic	-171287	NM_001113412	75578	Mm.276098	NM_029347	ENSMUSG00000028573	Fggy	2310009E04Rik	FGGY carbohydrate kinase domain containing	protein-coding
common_peak1-13093-76-36-1.55249102023433-8.65839734602022	chr19	7293336	7296138	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	-2631	NM_007750	12868	Mm.14022	NM_007750	ENSMUSG00000035885	Cox8a	COX8L	cytochrome c oxidase subunit VIIIa	protein-coding
common_peak2-28855-23-25-0.0213277863679888-0.30528805757448	chr5	73338017	73338995	+	0	NA	intron (NM_153567, intron 2 of 8)	intron (NM_153567, intron 2 of 8)	32905	NM_153567	75991	Mm.121285	NM_153567	ENSMUSG00000036087	Slain2	5033405K12Rik|8030444K12Rik|AI596370	SLAIN motif family, member 2	protein-coding
common_peak2-21812-14-8-0.729291158915332-0.771068449301682	chr11	119056646	119057147	+	0	NA	intron (NM_172443, intron 3 of 11)	intron (NM_172443, intron 3 of 11)	32917	NM_172443	207592	Mm.205263	NM_172443	ENSMUSG00000039976	Tbc1d16	B930087K01|BC026530|Tcd1d16	TBC1 domain family, member 16	protein-coding
unique_peak1-2492-10-1-2.35641534500877-2.57096726280955	chr16	10807008	10807662	+	0	NA	Intergenic	Intergenic	-10419	NM_013637	19118	Mm.42733	NM_013637	ENSMUSG00000022501	Prm1	Prm-1	protamine 1	protein-coding
common_peak2-24246-9-12--0.510826311736872-0.394412252720706	chr16	91485240	91485731	+	0	NA	promoter-TSS (NM_010508)	promoter-TSS (NM_010508)	25	NM_010508	15975	Mm.502	NM_010508		Ifnar1	CD118|Ifar|Ifnar|Ifrc|Infar	interferon (alpha and beta) receptor 1	protein-coding
common_peak2-26451-28-33--0.0345037214288766-0.301029995664001	chr2	71644289	71645155	+	0	NA	intron (NM_001277970, intron 1 of 24)	intron (NM_001277970, intron 1 of 24)	19726	NM_001277970	16403	Mm.225096	NM_008397		Itga6	5033401O05Rik|AI115430|Cd49f|VLA-6	integrin alpha 6	protein-coding
common_peak1-9416-24-24-0.149353712992992-0.367910579842133	chr11	101082614	101083438	+	0	NA	intron (NM_007970, intron 1 of 20)	intron (NM_007970, intron 1 of 20)	4738	NM_007970	14055	Mm.5027	NM_007970	ENSMUSG00000006920	Ezh1	AW557915|mKIAA0388	enhancer of zeste homolog 1 (Drosophila)	protein-coding
unique_peak2-34391-1-6--2.43441193227435-1.56314192529759	chr14	23052242	23052575	+	0	NA	intron (NM_028275, intron 2 of 6)	intron (NM_028275, intron 2 of 6)	213474	NM_028275	76633	Mm.489898	NM_028275	ENSMUSG00000063458	1700112E06Rik	2700009F18Rik|Oca7	RIKEN cDNA 1700112E06 gene	protein-coding
common_peak2-31417-9-8-0.0196884049619079-1.03275496310833	chr8	94362845	94363328	+	0	NA	Intergenic	Intergenic	-37533	NM_008393	16373	Mm.238044	NM_008393	ENSMUSG00000031734	Irx3	AI894186	Iroquois related homeobox 3	protein-coding
unique_peak1-5451-8-5-0.420259917226415-1.10484139239135	chr5	120516582	120517045	+	0	NA	Intergenic	Intergenic	-49709	NM_028762	74111	Mm.41022	NM_028762		Rbm19	1200009A02Rik|AV302714|NPO	RNA binding motif protein 19	protein-coding
unique_peak2-33344-2-4--1.23938235115068-0.931118710592187	chr11	23095198	23095610	+	0	NA	Intergenic	L1Md_F|LINE|L1	-60637	NM_001035226	103573	Mm.217547	NM_134014	ENSMUSG00000020290	Xpo1	AA420417|Crm1|Exp1	exportin 1, CRM1 homolog (yeast)	protein-coding
common_peak1-15281-23-26--0.0331199976543877-0.301029995663988	chr4	40702623	40703671	+	0	NA	intron (NM_021535, intron 1 of 11)	B1_Mur4|SINE|Alu	1771	NM_021535	74255	Mm.289929	NM_021535		Smu1	2600001O03Rik|2610203K23Rik|AB044414|AI845086|AW556129|Bwd	smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)	protein-coding
common_peak1-13298-10-12--0.344024373132323-0.340565874754526	chr19	38931010	38931557	+	0	NA	intron (NM_145952, intron 1 of 12)	RLTR21|LTR|ERVK	20214	NM_145952	209478	Mm.391153	NM_145952	ENSMUSG00000048720	Tbc1d12	BC033574	TBC1D12: TBC1 domain family, member 12	protein-coding
common_peak2-25057-135-158-0.444602447756106-2.26209913841314	chr18	33889271	33892213	+	0	NA	Intergenic	Lx8|LINE|L1	-63804	NR_038152	69749	Mm.248787	NR_038151	ENSMUSG00000087590	2410004N09Rik	-	RIKEN cDNA 2410004N09 gene	ncRNA
unique_peak1-5875-9-5-0.604650905683064-1.21398586181642	chr6	86471623	86472184	+	0	NA	Intergenic	B1F2|SINE|Alu	4256	NM_011865	23983	Mm.274146	NM_011865	ENSMUSG00000051695	Pcbp1	WBP17|[a]CP-1|alphaCP-1	poly(rC) binding protein 1	protein-coding
unique_peak1-5849-9-3-1.18961340640422-1.57096726280955	chr6	82908760	82909366	+	0	NA	intron (NM_033079, intron 2 of 9)	MTD|LTR|MaLR	12147	NM_033079	110958	Mm.100652	NM_033079	ENSMUSG00000030041	M1ap	D6Mm5e	meiosis 1 associated protein	protein-coding
common_peak2-20138-18-28--0.54506184389922-0.591915184368642	chr1	166138033	166138971	+	0	NA	intron (NM_007976, intron 19 of 24)	intron (NM_007976, intron 19 of 24)	-40675	NM_054087	116914	Mm.35444	NM_054087	ENSMUSG00000040918	Slc19a2	AV276020|AW322295|DDA1|THTR1|TRMA	solute carrier family 19 (thiamine transporter), member 2	protein-coding
common_peak1-12131-21-14-0.662598669657717-0.879255460030357	chr17	27050589	27051640	+	0	NA	Intergenic	ORR1A2-int|LTR|MaLR	-2922	NM_053173	16580	Mm.491138	NM_016761	ENSMUSG00000024301	Kifc5b	Hset|KNSL2|Kifc5a	kinesin family member C5B	protein-coding
common_peak2-20486-16-13-0.310908720210457-0.417187467413082	chr10	52381718	52382096	+	0	NA	Intergenic	IAPLTR2a|LTR|ERVK	-28400	NM_178675	215085	Mm.338690	NM_178675	ENSMUSG00000038602	Slc35f1	Duf6|E130016L02	solute carrier family 35, member F1	protein-coding
common_peak2-24341-10-6-0.549060422951165-1.21398586181642	chr17	5024131	5024483	+	0	NA	intron (NM_001085355, intron 1 of 19)	MTE2a|LTR|MaLR	29233	NM_001085355	239985	Mm.133401	NM_001085355	ENSMUSG00000069729	Arid1b	8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235	AT rich interactive domain 1B (SWI-like)	protein-coding
unique_peak1-6064-10-1-2.35641534500877-2.57096726280955	chr6	116646220	116646748	+	0	NA	intron (NM_178768, intron 4 of 4)	intron (NM_178768, intron 4 of 4)	20292	NM_178768	319776	Mm.133120	NM_178768	ENSMUSG00000048108	Tmem72	C230095G01Rik	transmembrane protein 72	protein-coding
common_peak2-25036-69-56-0.762252433093991-2.71621815333348	chr18	25714740	25716283	+	0	NA	intron (NM_001146294, intron 2 of 12)	intron (NM_001146294, intron 2 of 12)	196973	NM_133195	108013	Mm.266435	NM_133195	ENSMUSG00000024268	Celf4	A230070D14Rik|BRUNOL-4|Brul4|Brunol4|C130060B05Rik	CUGBP, Elav-like family member 4	protein-coding
unique_peak1-3064-7-1-1.79909083029819-1.80617997398389	chr18	10919317	10919799	+	0	NA	Intergenic	Intergenic	-132950	NM_010258	14465	Mm.329287	NM_010258	ENSMUSG00000005836	Gata6	AA410133|GATA-6	GATA binding protein 6	protein-coding
common_peak1-19168-44-17-1.65196783312622-5.256600851469	chr9	96380666	96382117	+	0	NA	Intergenic	B3|SINE|B2	-2377	NM_011279	19823	Mm.28235	NM_011279	ENSMUSG00000051234	Rnf7	Rbx2|SAG	ring finger protein 7	protein-coding
common_peak1-15272-70-89-0.128113820045724-0.395124771764859	chr4	33030665	33032251	+	0	NA	intron (NM_001012451, intron 1 of 15)	intron (NM_001012451, intron 1 of 15)	6343	NM_001012451	140577	Mm.214766	NM_080471	ENSMUSG00000040183	Ankrd6	-	ankyrin repeat domain 6	protein-coding
common_peak2-32257-49-92--0.532874988082847-1.3982704267089	chrX	8096203	8097171	+	0	NA	intron (NM_001126491, intron 4 of 5)	IAPEz-int|LTR|ERVK	5393	NM_001126491	546263	Mm.475615	NM_001126491	ENSMUSG00000079704	Gm14459	OTTMUSG00000016698	predicted gene 14459	protein-coding
unique_peak1-3433-10-5-0.771452844287613-1.33892459842472	chr19	6545275	6545744	+	0	NA	Intergenic	Intergenic	-2439	NM_009203	20521	Mm.391146	NM_009203	ENSMUSG00000061742	Slc22a12	AI987855|OAT4L|Rst|Slc22al2|URAT1	solute carrier family 22 (organic anion/cation transporter), member 12	protein-coding
common_peak1-9341-23-20-0.32945008173032-0.471456499375596	chr11	96034301	96035510	+	0	NA	Intergenic	Intergenic	-20770	NM_008267	15408	Mm.57221	NM_008267		Hoxb13	-	homeobox B13	protein-coding
common_peak2-25164-14-7-0.899216160357645-0.947446088118041	chr18	53249370	53249843	+	0	NA	Intergenic	MTC|LTR|MaLR	-86413	NM_026386	67804	Mm.252171	NM_026386	ENSMUSG00000034484	Snx2	0610030A03Rik	sorting nexin 2	protein-coding
common_peak2-28811-33-29-0.42444696691701-0.683454027796267	chr5	65107484	65108200	+	0	NA	Intergenic	Intergenic	-86920	NM_008453	16599	Mm.392759	NM_008453	ENSMUSG00000029178	Klf3	9930027G08Rik|AL024007|Bklf|Tef-2	Kruppel-like factor 3 (basic)	protein-coding
common_peak1-19008-7-6--0.00826409175941478-0.97990265578305	chr9	61361171	61361542	+	0	NA	Intergenic	L1M3|LINE|L1	141183	NM_001083927	21887	Mm.24255	NM_009389	ENSMUSG00000032280	Tle3	2610103N05Rik|ESG|Grg3a|Grg3b|mKIAA1547	transducin-like enhancer of split 3, homolog of Drosophila E(spl)	protein-coding
unique_peak1-1125-8-6-0.197867495889966-1.03789460276074	chr11	95009557	95009996	+	0	NA	intron (NR_040279, intron 1 of 2)	intron (NR_040279, intron 1 of 2)	-2661	NM_007867	13394	Mm.439766	NM_007867		Dlx4	Dlx-4|Dlx7	distal-less homeobox 4	protein-coding
unique_peak2-38020-8-8--0.164702583494742-1.00793137938329	chr6	34317657	34318122	+	0	NA	intron (NM_008012, intron 9 of 9)	Lx9|LINE|L1	13725	NM_008012	14187	Mm.5378	NM_008012	ENSMUSG00000029762	Akr1b8	FR-1|Fgfrp|Fgrp	aldo-keto reductase family 1, member B8	protein-coding
common_peak1-9409-16-20--0.274053780510699-0.353907621462756	chr11	100969979	100970776	+	0	NA	intron (NM_026501, intron 1 of 8)	B1_Mm|SINE|Alu	10761	NM_026501	67998	Mm.33881	NM_026501	ENSMUSG00000017802	Fam134c	1300010M03Rik|4933404C01Rik|AI551748	family with sequence similarity 134, member C	protein-coding
unique_peak2-34607-3-8--1.58390809140159-1.39487600375387	chr14	73385498	73385968	+	0	NA	Intergenic	Intergenic	-39677	NR_027860	668489	Mm.158324	NR_027860		Gm9199	EG668489	glycine cleavage system protein H (aminomethyl carrier) pseudogene	pseudo
unique_peak1-5601-10-6-0.549060422951165-1.21398586181642	chr6	72286076	72286614	+	0	NA	exon (NM_138592, exon 6 of 13)	exon (NM_138592, exon 6 of 13)	8824	NM_138592	28035	Mm.281900	NM_138592	ENSMUSG00000056305	Usp39	AA408960|AI894154|CGI-21|D6Wsu157e|SAD1	ubiquitin specific peptidase 39	protein-coding
common_peak2-27906-7-7--0.200909169701811-0.97990265578305	chr4	4614328	4614736	+	0	NA	Intergenic	Lx7|LINE|L1	105921	NM_177730	242291	Mm.218889	NM_177730		Impad1	1110001C20Rik|AA408880|AI451589|AL022796|B230207P20|Jaws|gPAPP	inositol monophosphatase domain containing 1	protein-coding
unique_peak2-39484-1-7--2.62705701021674-1.80617997398389	chr9	58247237	58247717	+	0	NA	Intergenic	Intergenic	29166	NR_040727	73529	Mm.490924	NR_040727		1700072B07Rik	-	RIKEN cDNA 1700072B07 gene	ncRNA
common_peak2-30446-30-50--0.502749932479622-0.798133060242836	chr7	45128369	45129638	+	0	NA	Intergenic	Intergenic	1390901	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak2-39342-6-8--0.60452689106201-1.03789460276074	chr9	35061690	35062130	+	0	NA	intron (NM_001286604, intron 2 of 9)	RMER4A|LTR|ERVK	13480	NM_175411	109229	Mm.24197	NM_175411	ENSMUSG00000050471	Fam118b	2310022O21Rik|2700018L24Rik|C030004A17Rik|Ppp4r1l	family with sequence similarity 118, member B	protein-coding
unique_peak1-420-10-3-1.35641534500877-1.75805390616669	chr1	160656142	160656703	+	0	NA	intron (NM_001085376, intron 20 of 21)	intron (NM_001085376, intron 20 of 21)	220666	NR_030441	735253		NR_030441		Mir488	Mirn488|mmu-mir-488	microRNA 488	ncRNA
common_peak2-23436-37-23-0.941030570764663-1.99811292136509	chr15	62139001	62139800	+	0	NA	Intergenic	Intergenic	-88394	NR_003523	67552	Mm.484027	NM_026230		H2afy3	4933432H23Rik	H2A histone family, member Y3	pseudo
common_peak1-19027-16-33--0.969199198982277-1.43262124146305	chr9	63941232	63941929	+	0	NA	Intergenic	RMER15|LTR|ERVL	13012	NR_040743	76814	Mm.243771	NR_040743		Scarletltr	2600006L11Rik	Scarletltr, erythroid developmental long intergenic non-protein coding transcript	ncRNA
unique_peak2-37032-3-8--1.58390809140159-1.39487600375387	chr3	131271559	131272031	+	0	NA	intron (NM_001289477, intron 10 of 12)	B1_Mur1|SINE|Alu	42799	NM_001289477	23971	Mm.244912	NM_011863	ENSMUSG00000028032	Papss1	AI325286|Asapk|SK1	3'-phosphoadenosine 5'-phosphosulfate synthase 1	protein-coding
common_peak2-24846-33-43--0.128094056111768-0.324581211600972	chr17	75109550	75110522	+	0	NA	Intergenic	Intergenic	-7054	NM_152817	74196	Mm.209503	NM_152817	ENSMUSG00000024078	Ttc27	2610511O17Rik	tetratricopeptide repeat domain 27	protein-coding
unique_peak1-2823-8-4-0.683294323060208-1.21878474469819	chr17	26608927	26609401	+	0	NA	Intergenic	Intergenic	36253	NM_013642	19252	Mm.239041	NM_013642	ENSMUSG00000024190	Dusp1	3CH134|MKP1|Ptpn16|U19515|erp|mkp-1	dual specificity phosphatase 1	protein-coding
unique_peak2-37765-2-6--1.72480917832092-1.26211192963361	chr5	115235317	115235599	+	0	NA	intron (NM_026718, intron 1 of 14)	intron (NM_026718, intron 1 of 14)	10309	NM_026718	68420	Mm.275554	NM_026718	ENSMUSG00000041870	Ankrd13a	1100001D10Rik|ANKRD13|AU046136	ankyrin repeat domain 13a	protein-coding
common_peak2-20421-38-57--0.286528335829042-0.468749305398727	chr10	26077720	26079124	+	0	NA	intron (NM_172787, intron 1 of 21)	Tigger12c|DNA|MER2_type	16569	NM_172787	237339	Mm.338439	NM_172787	ENSMUSG00000039089	L3mbtl3	AI481284|MBT-1	l(3)mbt-like 3 (Drosophila)	protein-coding
common_peak2-21986-69-60-0.664405109695846-2.21242713350372	chr12	52603124	52604004	+	0	NA	Intergenic	Intergenic	-90764	NM_007728	12810	Mm.21325	NM_007728	ENSMUSG00000020953	Coch	AW122937|Coch-5B2|D12H14S564E	coagulation factor C homolog (Limulus polyphemus)	protein-coding
common_peak2-28602-8-8--0.164702583494742-1.00793137938329	chr5	23418143	23418610	+	0	NA	Intergenic	MTE-int|LTR|MaLR	60325	NR_028536	100217436		NR_028536		Snord93	Gm22397|MBII-336	small nucleolar RNA, C/D box 93	snoRNA
unique_peak1-325-7-0-2.79909083029819-2.40823996531185	chr1	133036325	133036835	+	0	NA	Intergenic	B3A|SINE|B2	-1769	NM_145508	226419	Mm.39299	NM_145508	ENSMUSG00000016526	Dyrk3	BC006704	dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 3	protein-coding
common_peak2-20905-11-8-0.338768582809301-1.14218153353838	chr11	4595028	4595480	+	0	NA	Intergenic	RMER19A|LTR|ERVK	9093	NM_197979	66152	Mm.269736	NM_197979	ENSMUSG00000059534	Uqcr10	1110020P15Rik|AA960494|Ucrc	ubiquinol-cytochrome c reductase, complex III subunit X	protein-coding
unique_peak2-36742-7-10--0.660340788339108-1.12966497611638	chr3	58366136	58366603	+	0	NA	Intergenic	RMER12|LTR|ERVK	-14211	NM_001040396	69227	Mm.270950	NM_001040396	ENSMUSG00000075700	Selt	2810407C02Rik|5730408P04Rik	selenoprotein T	protein-coding
unique_peak2-36630-4-7--1.02346051385325-1.09384600808989	chr3	5210230	5210790	+	0	NA	intron (NR_045905, intron 1 of 2)	intron (NR_045905, intron 1 of 2)	-8044	NM_030708	80892	Mm.41522	NM_030708	ENSMUSG00000025255	Zfhx4	A930021B15|C130041O22Rik|Zfh-4|Zfh4	zinc finger homeodomain 4	protein-coding
unique_peak2-35099-7-6--0.00826409175941478-0.97990265578305	chr16	20802056	20802459	+	0	NA	Intergenic	B3|SINE|B2	-67673	NM_009379	21832	Mm.3943	NM_009379	ENSMUSG00000022847	Thpo	Mgdf|Ml|Mpllg|Tpo	thrombopoietin	protein-coding
common_peak1-11688-58-92--0.243208876217534-0.515844704882417	chr16	30501475	30503217	+	0	NA	Intergenic	Intergenic	48318	NM_172614	224090	Mm.241459	NM_172614		Tmem44	1700007N03Rik|9330161C17Rik|B230220N21	transmembrane protein 44	protein-coding
common_peak2-24475-19-51--1.29775239147941-3.09993411082635	chr17	24549838	24551289	+	0	NA	intron (NR_033554, intron 2 of 5)	intron (NR_033554, intron 2 of 5)	895	NR_033554	654822	Mm.489806	NM_001039561	ENSMUSG00000073437	D330041H03Rik	-	RIKEN cDNA D330041H03 gene	ncRNA
unique_peak2-39730-5-6--0.511735258063458-0.947717972411649	chr9	122177790	122178199	+	0	NA	intron (NM_001271873, intron 4 of 12)	intron (NM_001271873, intron 4 of 12)	5152	NR_106185	102465896		NR_106185		Mir8106	mmu-mir-8106	microRNA mir-8106	ncRNA
common_peak1-14080-10-25--1.34402437313232-1.74319850844462	chr2	121449304	121449814	+	0	NA	intron (NM_172673, intron 1 of 14)	MTD|LTR|MaLR	117100	NM_001290986	241627	Mm.293284	NM_030234	ENSMUSG00000027242	Wdr76	5830411K18Rik|6030457D09|AA517836	WD repeat domain 76	protein-coding
common_peak2-23614-38-73--0.63800070633042-1.43077784553669	chr15	81810227	81811883	+	0	NA	promoter-TSS (NM_025503)	promoter-TSS (NM_025503)	85	NM_025503	66346	Mm.54292	NM_025503	ENSMUSG00000061633	1700029P11Rik	-	RIKEN cDNA 1700029P11 gene	protein-coding
unique_peak1-7434-11-0-3.50869358425161-3.61235994796777	chrX	167195694	167196209	+	0	NA	Intergenic	Intergenic	-779102	NR_029457	654820	Mm.34441	NM_001039559	ENSMUSG00000072844	G530011O06Rik	-	RIKEN cDNA G530011O06 gene	ncRNA
common_peak1-8774-36-20-1.08700366338899-2.44377456520723	chr11	7238479	7239813	+	0	NA	Intergenic	CT-rich|Low_complexity|Low_complexity	-125220	NM_008343	16009	Mm.29254	NM_008343	ENSMUSG00000020427	Igfbp3	AI649005|IGFBP-3|IGgfbp3	insulin-like growth factor binding protein 3	protein-coding
common_peak1-16781-52-47-0.523297489544543-1.21256932621262	chr6	38847830	38849841	+	0	NA	Intergenic	Intergenic	-20150	NM_011539	21391	Mm.4054	NM_011539	ENSMUSG00000029925	Tbxas1	CYP5|CYP5A1|THAS|TS|TXAS|TXS	thromboxane A synthase 1, platelet	protein-coding
unique_peak2-37497-11-39--1.81323451063575-3.91086877283603	chr5	5707373	5708377	+	0	NA	Intergenic	Intergenic	-13307	NM_028734	74051	Mm.274956	NM_028734	ENSMUSG00000015653	Steap2	4921538B17Rik|AI930049|AW045895|IPCA-1|IPCA1|PCANAP1|STAMP1|STMP	six transmembrane epithelial antigen of prostate 2	protein-coding
common_peak1-11728-67-71-0.374486481340683-0.943815179304744	chr16	33184563	33185917	+	0	NA	promoter-TSS (NM_176840)	promoter-TSS (NM_176840)	83	NM_176840	106326	Mm.486405	NM_176840	ENSMUSG00000022807	Osbpl11	9430097N02Rik|AI132306|AU019795|ORP-11	oxysterol binding protein-like 11	protein-coding
unique_peak1-1704-12-3-1.64877598508764-2.36932189928148	chr13	91978436	91979131	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-31482	NM_145453	69085	Mm.52356	NM_145453	ENSMUSG00000021621	Zcchc9	1810019C21Rik	zinc finger, CCHC domain containing 9	protein-coding
common_peak2-31491-21-33--0.517973575984104-0.610902792227722	chr8	106622206	106623492	+	0	NA	Intergenic	MER5A|DNA|MER1_type	-2676	NM_009868	12562	Mm.21767	NM_009868	ENSMUSG00000031871	Cdh5	7B4|AA408225|Cd144|VE-Cad|VECD|VEcad|Vec	cadherin 5	protein-coding
common_peak1-17650-10-26--1.3984721571547-1.90052685918624	chr7	56050363	56050909	+	0	NA	intron (NM_028031, intron 1 of 16)	MLT1E1A|LTR|MaLR	6263	NM_028031	243983	Mm.279116	NM_028031	ENSMUSG00000030471	Zdhhc13	2410004E01Rik|C530010M18|HIP3RP|Hip14l|kojak|skc4	zinc finger, DHHC domain containing 13	protein-coding
common_peak2-25226-8-4-0.683294323060208-1.21878474469819	chr18	62002338	62002749	+	0	NA	intron (NM_001164491, intron 7 of 23)	intron (NM_001164491, intron 7 of 23)	-56227	NM_178928	106877	Mm.26632	NM_178928	ENSMUSG00000033032	Afap1l1	AI173486	actin filament associated protein 1-like 1	protein-coding
unique_peak2-33957-5-8--0.874305337448166-1.10484139239135	chr12	80210685	80211223	+	0	NA	Intergenic	(TCTA)n|Simple_repeat|Simple_repeat	-6028	NR_110486	321017	Mm.311575	NR_110486		9230116L04Rik	-	RIKEN cDNA 9230116L04 gene	ncRNA
common_peak1-14894-11-11--0.0762689164695427-0.301029995663976	chr3	96221886	96222406	+	0	NA	Intergenic	RLTR47_MM|LTR|ERV1	-3390	NR_001579	21748		NR_001579	ENSMUSG00000064796	Terc	mTER|mTR	telomerase RNA component	ncRNA
common_peak2-30759-18-19--0.00900894365901106-0.306598483909153	chr7	122066336	122067099	+	0	NA	Intergenic	Intergenic	-25447	NR_040317	101786	Mm.395157	NR_040317		A730082K24Rik	AU044236	RIKEN cDNA A730082K24 gene	ncRNA
common_peak2-28201-9-11--0.395349094316936-0.344532117358383	chr4	116824470	116824915	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	2487	NR_028524	100217424		NR_028524		Snord38a	MBII-329	small nucleolar RNA, C/D box 38A	snoRNA
unique_peak2-34781-5-10--1.16381195464315-1.33892459842472	chr15	60823281	60823693	+	0	NA	Intergenic	Intergenic	-70662	NM_001081067	117586	Mm.291499	NM_001081067	ENSMUSG00000022347	A1bg	C44	alpha-1-B glycoprotein	protein-coding
common_peak2-22238-10-6-0.549060422951165-1.21398586181642	chr13	28917539	28917916	+	0	NA	intron (NR_045053, intron 2 of 8)	intron (NR_045053, intron 2 of 8)	59564	NR_045054	72518	Mm.37454	NR_045053		2610307P16Rik	AI666457	RIKEN cDNA 2610307P16 gene	ncRNA
unique_peak2-33237-6-7--0.434601889619698-0.97990265578305	chr10	121426047	121426487	+	0	NA	intron (NM_001242411, intron 1 of 21)	Lx9|LINE|L1	58104	NM_001242411	117600	Mm.288698	NM_001081037	ENSMUSG00000020121	Srgap1	4930572H05Rik|Arhgap13	SLIT-ROBO Rho GTPase activating protein 1	protein-coding
unique_peak1-619-10-1-2.35641534500877-2.57096726280955	chr10	24164731	24165312	+	0	NA	Intergenic	Intergenic	-150227	NM_010217	14219	Mm.390287	NM_010217	ENSMUSG00000019997	Ctgf	Ccn2|Fisp12|Hcs24|fisp-12	connective tissue growth factor	protein-coding
common_peak1-18255-15-30--0.942031559831219-1.24110690293937	chr8	33905944	33906626	+	0	NA	Intergenic	Intergenic	154213	NM_001177589	100042715	Mm.291093	NM_001177589		Gm3985	-	predicted gene 3985	protein-coding
common_peak2-28840-25-29--0.0450406902634128-0.301029995663982	chr5	67847401	67847988	+	0	NA	Intergenic	Intergenic	-7443	NR_110363	320479	Mm.387187	NR_015582		C330024D21Rik	-	RIKEN cDNA C330024D21 gene	ncRNA
unique_peak1-2604-9-4-0.867685311516858-1.36011389749466	chr16	33404317	33404779	+	0	NA	intron (NM_011749, intron 1 of 8)	B4A|SINE|B4	23687	NM_011749	22661	Mm.392667	NM_011749	ENSMUSG00000022811	Zfp148	2210405J08Rik|AI480666|AW045217|BERF-1|BFCOL1|ZBP-89|Znf148	zinc finger protein 148	protein-coding
common_peak2-29182-28-51--0.647480598319629-1.1451285992054	chr5	135009092	135009895	+	0	NA	intron (NM_009990, intron 2 of 16)	intron (NM_009990, intron 2 of 16)	18811	NM_001039162	269713	Mm.255138	NM_009990	ENSMUSG00000063146	Clip2	B230327O20|CLIP-115|Clip1|Cyln2|WSCR4|mKIAA0291|wbscr4	CAP-GLY domain containing linker protein 2	protein-coding
common_peak2-31967-5-4--0.0263084308932156-0.909929411522249	chr9	66991541	66991942	+	0	NA	intron (NR_045748, intron 1 of 2)	LTR33|LTR|ERVL	10373	NR_045748	100502636	Mm.412607	NR_045748		Gm19299	-	predicted gene, 19299	ncRNA
unique_peak2-38094-1-6--2.43441193227435-1.56314192529759	chr6	58769514	58769829	+	0	NA	Intergenic	MMERGLN-int|LTR|ERV1	-14023	NM_028705	73998	Mm.191892	NM_028705	ENSMUSG00000029804	Herc3	5730409F18Rik|AI646603|mKIAA0032	hect domain and RLD 3	protein-coding
common_peak1-10097-11-11--0.0762689164695427-0.301029995663976	chr13	24830947	24831459	+	0	NA	Intergenic	B3A|SINE|B2	22603	NM_020567	57441	Mm.12239	NM_020567	ENSMUSG00000006715	Gmnn	AW546347|Gem	geminin	protein-coding
unique_peak1-3313-7-0-2.79909083029819-2.40823996531185	chr18	78373662	78374062	+	0	NA	intron (NM_207651, intron 12 of 21)	intron (NM_207651, intron 12 of 21)	2049	NM_001110273	27411	Mm.44158	NM_030683	ENSMUSG00000024552	Slc14a2	UT-A1|UT-A3	solute carrier family 14 (urea transporter), member 2	protein-coding
common_peak1-10378-13-22--0.745089925419244-0.690311289528838	chr13	94192614	94193284	+	0	NA	Intergenic	Intergenic	76814	NM_021310	57748	Mm.100273	NM_021310	ENSMUSG00000021690	Jmy	-	junction-mediating and regulatory protein	protein-coding
common_peak1-10191-26-48--0.686810751956746-1.2112076832151	chr13	43559573	43560579	+	0	NA	intron (NM_019930, intron 1 of 13)	Lx8|LINE|L1	16266	NM_019930	56705	Mm.148781	NM_019930	ENSMUSG00000038546	Ranbp9	IBAP-1|Ibap1|RanBPM	RAN binding protein 9	protein-coding
common_peak1-10230-30-19-0.84774731460451-1.46094028072561	chr13	51963510	51964422	+	0	NA	Intergenic	Intergenic	21922	NM_011817	23882	Mm.281298	NM_011817	ENSMUSG00000021453	Gadd45g	AI327420|C86281|CR6|DDIT2|OIG37	growth arrest and DNA-damage-inducible 45 gamma	protein-coding
common_peak2-20313-32-44--0.212761077110015-0.36647540798597	chr10	41565365	41566346	+	0	NA	intron (NM_001162908, intron 1 of 9)	IAPEz-int|LTR|ERVK	35475	NM_001162908	140742	Mm.139418	NM_001013370	ENSMUSG00000038332	Sesn1	1110002G11Rik|AU044290|Pa26|Sest1	sestrin 1	protein-coding
unique_peak1-1813-19-5-1.81772482594053-2.59995804677862	chr14	30633791	30634808	+	0	NA	Intergenic	Lx|LINE|L1	-99249	NM_009785	12294	Mm.386754	NM_009785	ENSMUSG00000021991	Cacna2d3	Cacnad3	calcium channel, voltage-dependent, alpha2/delta subunit 3	protein-coding
unique_peak1-2092-17-7-1.21829633820504-1.55050753388977	chr15	36959875	36960655	+	0	NA	Intergenic	Intergenic	-23108	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
unique_peak2-32444-8-9--0.316705676939792-1.03275496310833	chr1	164249047	164249661	+	0	NA	intron (NM_172646, intron 6 of 19)	MTEa|LTR|MaLR	95855	NR_029796	387210		NR_029796	miRBase:MI0000698	Mir214	Mirn214|mmu-mir-214	microRNA 214	ncRNA
common_peak1-17102-13-10-0.319040412000471-0.446472590016315	chr6	113438848	113439547	+	0	NA	intron (NM_133930, intron 4 of 9)	intron (NM_133930, intron 4 of 9)	5634	NM_133930	171508	Mm.41593	NM_133930	ENSMUSG00000030284	Creld1	AI843811	cysteine-rich with EGF-like domains 1	protein-coding
unique_peak2-39192-0-7--3.84013093047421-1.80617997398389	chr8	104341839	104342217	+	0	NA	Intergenic	MTA_Mm-int|LTR|MaLR	966983	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
common_peak1-18000-21-30--0.384707045120639-0.446094173747089	chr7	139388210	139388915	+	0	NA	Intergenic	Intergenic	-42138	NM_018867	55987	Mm.471654	NM_018867	ENSMUSG00000030862	Cpxm2	4632435C11Rik|CPX-2|Cpx2	carboxypeptidase X 2 (M14 family)	protein-coding
unique_peak1-2183-18-2-2.7279566505072-4.01305082679061	chr15	63066772	63067751	+	0	NA	Intergenic	Intergenic	243902	NR_045279	432958	Mm.255105	NR_045279		Gm20740	-	predicted gene, 20740	ncRNA
common_peak2-22353-87-105-0.26771665121797-0.794841903579885	chr13	24800722	24801943	+	0	NA	intron (NM_029679, intron 15 of 22)	intron (NM_029679, intron 15 of 22)	52474	NM_020567	57441	Mm.12239	NM_020567	ENSMUSG00000006715	Gmnn	AW546347|Gem	geminin	protein-coding
common_peak1-15519-60-23-1.76932936089938-7.93677926190791	chr4	117189098	117190266	+	0	NA	Intergenic	Intergenic	-20162	NM_025739	66743	Mm.318331	NM_025739	ENSMUSG00000028677	Rnf220	4732477A13|4931406I20Rik|5730503K05Rik|AV302541	ring finger protein 220	protein-coding
common_peak1-10669-37-47--0.0589694292353373-0.303364957229384	chr14	52013928	52015557	+	0	NA	Intergenic	L1Md_F3|LINE|L1	-15934	NM_011686	669149	Mm.377117	NM_011686	ENSMUSG00000000606	Vmn2r88	V2r13|V2r3	vomeronasal 2, receptor 88	protein-coding
common_peak1-12842-50-60-0.110202978916066-0.363095533294599	chr18	70643679	70644931	+	0	NA	intron (NM_001289649, intron 6 of 8)	B4|SINE|B4	11985	NM_001289650	170461	Mm.83623	NM_029019	ENSMUSG00000079608	Stard6	1700011K09Rik|4833424I06Rik|4933429L05Rik|AI644424	StAR-related lipid transfer (START) domain containing 6	protein-coding
unique_peak1-2124-18-2-2.7279566505072-4.01305082679061	chr15	53208470	53209255	+	0	NA	Intergenic	L1Md_T|LINE|L1	-31124	NM_010162	14042	Mm.309395	NM_010162		Ext1	AA409028	exostoses (multiple) 1	protein-coding
common_peak1-17558-60-80-0.014441858735907-0.306391792142995	chr7	30955947	30958115	+	0	NA	intron (NM_001033540, intron 1 of 2)	B1_Mus1|SINE|Alu	2090	NM_001033540	330503	Mm.434058	NM_001033540	ENSMUSG00000066647	Gm5113	B430201F14|EG330503	predicted gene 5113	protein-coding
unique_peak2-35720-12-43--1.81065563354966-3.98058741041078	chr18	34006308	34007350	+	0	NA	intron (NM_013512, intron 13 of 23)	intron (NM_013512, intron 13 of 23)	52283	NR_038151	69749	Mm.248787	NR_038151	ENSMUSG00000087590	2410004N09Rik	-	RIKEN cDNA 2410004N09 gene	ncRNA
common_peak2-24633-11-11--0.0762689164695427-0.301029995663976	chr17	34944642	34945221	+	0	NA	Intergenic	Intergenic	-3560	NM_009995	13079	Mm.440407	NM_009995	ENSMUSG00000024365	Cyp21a1	21-OH|21OH|21OHA|21OHB|CYP21OH-A|Cyp21|Cyp21-ps1|Cyp21B|Cyp21a2-ps|Cyp21a2ps|Oh21-1|Oh21-2	cytochrome P450, family 21, subfamily a, polypeptide 1	protein-coding
common_peak1-16677-115-100-0.820895477584601-5.11767593600866	chr6	6577574	6579451	+	0	NA	Intergenic	Intergenic	-49854	NM_009169	20422	Mm.2469	NM_009169		Shfm1	DSS1|Shfdg1|Shfg	split hand/foot malformation (ectrodactyly) type 1	protein-coding
common_peak2-20291-10-7-0.356415345008769-1.12966497611638	chr1	193387104	193387602	+	0	NA	intron (NM_029766, intron 5 of 14)	intron (NM_029766, intron 5 of 14)	12060	NM_029766	76843	Mm.189102	NM_029766	ENSMUSG00000037474	Dtl	2810047L02Rik|5730564G15Rik|Ramp	denticleless homolog (Drosophila)	protein-coding
common_peak1-14634-11-8-0.338768582809301-1.14218153353838	chr3	56261315	56261835	+	0	NA	Intergenic	Intergenic	-273952	NM_030595	26422	Mm.384353	NM_030595	ENSMUSG00000027799	Nbea	Lyst2|mKIAA1544	neurobeachin	protein-coding
unique_peak2-33559-2-4--1.23938235115068-0.931118710592187	chr11	83817834	83818268	+	0	NA	intron (NM_194341, intron 12 of 19)	B1_Mus2|SINE|Alu	40118	NM_194341	217030	Mm.82680	NM_194341	ENSMUSG00000034940	Synrg	Ap1gbp1|SYNG	synergin, gamma	protein-coding
unique_peak1-25-9-1-2.18961340640422-2.31132995230379	chr1	9547692	9548196	+	0	NA	intron (NM_175236, intron 8 of 13)	Lx5|LINE|L1	9817	NR_027664	76187	Mm.28514	NM_175236	ENSMUSG00000025911	Adhfe1	6330565B14Rik|AI043035|Adh8	alcohol dehydrogenase, iron containing, 1	protein-coding
common_peak1-17774-12-14--0.25811461052088-0.309074325783021	chr7	95688730	95689379	+	0	NA	Intergenic	Lx|LINE|L1	110271	NM_028238	72433	Mm.276669	NM_028238	ENSMUSG00000030559	Rab38	2310011F14Rik|AU043391|cht	RAB38, member RAS oncogene family	protein-coding
common_peak2-27196-11-11--0.0762689164695427-0.301029995663976	chr3	37975293	37975922	+	0	NA	Intergenic	Intergenic	131434	NR_040541	71342	Mm.410782	NR_040541		5430434I15Rik	-	RIKEN cDNA 5430434I15 gene	ncRNA
unique_peak2-32756-2-4--1.23938235115068-0.931118710592187	chr1	170037299	170037537	+	0	NA	Intergenic	Intergenic	324882	NM_001291508	18514	Mm.43358	NM_008783	ENSMUSG00000052534	Pbx1	2310056B04Rik|D230003C07Rik|Pbx-1	pre B cell leukemia homeobox 1	protein-coding
common_peak2-20396-20-22--0.03548717146582-0.301029995663994	chr10	20951927	20952636	+	0	NA	Intergenic	Intergenic	-63504	NM_001042593	56422	Mm.25527	NM_019702	ENSMUSG00000019977	Hbs1l	2810035F15Rik|AI326327|eRFS	Hbs1-like (S. cerevisiae)	protein-coding
common_peak1-14016-27-16-0.904083109644897-1.48160942223867	chr2	112255563	112256680	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	36753	NM_024254	72425	Mm.425091	NM_024254	ENSMUSG00000027132	Katnbl1	2410042D21Rik|AA166487|AA473307|AI467442	katanin p80 subunit B like 1	protein-coding
common_peak1-13313-19-16-0.315224485411347-0.448200956659575	chr19	41981697	41982601	+	0	NA	Intergenic	Intergenic	-4212	NM_023418	18648	Mm.391589	NM_023418	ENSMUSG00000011752	Pgam1	2310050F24Rik|Pgam-1	phosphoglycerate mutase 1	protein-coding
common_peak2-28359-18-17-0.142994149786039-0.353907621462753	chr4	136434234	136435015	+	0	NA	Intergenic	Intergenic	7468	NM_009777	12260	Mm.2570	NM_009777	ENSMUSG00000036905	C1qb	-	complement component 1, q subcomponent, beta polypeptide	protein-coding
unique_peak2-32939-2-6--1.72480917832092-1.26211192963361	chr10	39659299	39659649	+	0	NA	Intergenic	Intergenic	-12745	NM_001163503	72045	Mm.235981	NM_001163503	ENSMUSG00000039339	2010001E11Rik	Naglt1b	RIKEN cDNA 2010001E11 gene	protein-coding
unique_peak1-380-11-0-3.50869358425161-3.61235994796777	chr1	151686417	151687104	+	0	NA	intron (NM_008869, intron 17 of 17)	intron (NM_008869, intron 17 of 17)	121654	NM_008869	18783	Mm.4186	NM_008869	ENSMUSG00000056220	Pla2g4a	Pla2g4|cPLA2|cPLA2alpha	phospholipase A2, group IVA (cytosolic, calcium-dependent)	protein-coding
unique_peak1-3541-15-8-0.842239749113344-0.891319708951327	chr19	23149327	23150112	+	0	NA	Intergenic	B1_Mur2|SINE|Alu	-65997	NM_010638	16601	Mm.291595	NM_010638	ENSMUSG00000033863	Klf9	2310051E17Rik|AA589643|BTEB-1|Bteb1|ENSMUSG00000055440|Gm9971	Kruppel-like factor 9	protein-coding
common_peak2-20943-7-9--0.522837264589173-1.05908390183068	chr11	8706271	8706665	+	0	NA	Intergenic	Intergenic	-141930	NM_001083587	319939	Mm.337820	NM_001083587	ENSMUSG00000020422	Tns3	BC023928|F830010I22Rik|TEM6|Tens1	tensin 3	protein-coding
common_peak2-29886-21-17-0.399564263823923-0.561823156887258	chr6	113030519	113031196	+	0	NA	intron (NM_028385, intron 1 of 21)	intron (NM_028385, intron 1 of 21)	3224	NM_028385	72895	Mm.367159	NM_028385	ENSMUSG00000034269	Setd5	2900045N06Rik|C330007C20|C85544|mKIAA1757	SET domain containing 5	protein-coding
common_peak2-27576-10-9-0.0344872501214071-1.05503135781948	chr3	100161953	100162403	+	0	NA	Intergenic	Intergenic	-68150	NR_040543	73806	Mm.396549	NR_040543	ENSMUSG00000086923	4930406D18Rik	-	RIKEN cDNA 4930406D18 gene	ncRNA
common_peak1-8884-21-11-0.984526764545079-1.3750876294627	chr11	48799230	48799976	+	0	NA	3' UTR (NM_011579, exon 2 of 2)	3' UTR (NM_011579, exon 2 of 2)	6145	NM_011579	21822	Mm.15793	NM_011579	ENSMUSG00000078922	Tgtp1	Gtp2|Irgb6|Mg21|Tgtp	T cell specific GTPase 1	protein-coding
common_peak1-17574-30-54--0.611684304032787-1.08805681394569	chr7	35555158	35556150	+	0	NA	intron (NM_175140, intron 1 of 3)	B4|SINE|B4	42076	NM_175140	68947	Mm.29380	NM_175140	ENSMUSG00000060402	Chst8	1500011J21Rik|AI426009	carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8	protein-coding
unique_peak1-4203-11-5-0.923731083530457-1.477227296591	chr2	118658696	118659309	+	0	NA	intron (NM_026412, intron 8 of 8)	intron (NM_026412, intron 8 of 8)	19263	NM_026412	51944	Mm.252695	NM_026412		Knstrn	1700025D04Rik|C15orf23|D2Ertd750e|SKAP|Traf4af1	kinetochore-localized astrin/SPAG5 binding	protein-coding
common_peak1-10678-17-15-0.218296338205038-0.403453972741633	chr14	54221643	54222598	+	0	NA	Intergenic	Intergenic	-63495	NM_001205242	100568452	Mm.213248	NM_001205242		A430107P09Rik	Va10	RIKEN cDNA A430107P09 gene	protein-coding
common_peak1-19270-41-60--0.229588632714226-0.425219862997755	chr9	115309165	115310449	+	0	NA	Intergenic	Intergenic	64528	NR_040730	73856	Mm.399156	NR_040730		4930428G15Rik	-	RIKEN cDNA 4930428G15 gene	ncRNA
common_peak2-26204-16-21--0.341167976369236-0.392630012299441	chr2	25982575	25983236	+	0	NA	Intergenic	Intergenic	-4574	NM_026495	67991	Mm.131074	NM_026495	ENSMUSG00000026932	Nacc2	0610020I02Rik|AI448087|Btbd14a|C030048H19Rik	nucleus accumbens associated 2, BEN and BTB (POZ) domain containing	protein-coding
common_peak2-20319-32-44--0.212761077110015-0.36647540798597	chr10	80051244	80052328	+	0	NA	intron (NM_145421, intron 1 of 4)	intron (NM_145421, intron 1 of 4)	1300	NM_145421	216169	Mm.29802	NM_145421	ENSMUSG00000003346	Abhd17a	1700013O15Rik|BC005632|D10Bwg1364e|Fam108a	abhydrolase domain containing 17A	protein-coding
unique_peak1-4387-11-2-1.92373108353046-2.32232533660526	chr2	163578514	163579026	+	0	NA	Intergenic	LTR16C|LTR|ERVL	-2795	NM_001272052	11486	Mm.388	NM_007398	ENSMUSG00000017697	Ada	-	adenosine deaminase	protein-coding
unique_peak2-34968-1-5--2.2120195109379-1.32905871926422	chr15	98047684	98048083	+	0	NA	intron (NM_001011780, intron 1 of 2)	intron (NM_001011780, intron 1 of 2)	3604	NM_001011780	634104	Mm.259785	NM_001011780	ENSMUSG00000090129	Olfr287	MOR286-1	olfactory receptor 287	protein-coding
unique_peak1-6746-10-10--0.103016273628528-0.301029995663987	chr8	47721251	47721778	+	0	NA	intron (NM_009810, intron 5 of 6)	intron (NM_009810, intron 5 of 6)	18869	NM_009810	12367	Mm.34405	NM_009810		Casp3	A830040C14Rik|AC-3|Apopain|CASP-3|CC3|CPP-32|CPP32|Caspase-3|Lice|SCA-1|Yama|mldy	caspase 3	protein-coding
common_peak1-10073-8-11--0.579740082773585-1.14218153353838	chr13	23537324	23537806	+	0	NA	Intergenic	CpG	-14679	NR_015492	320842	Mm.487476	NR_015492	ENSMUSG00000085024	C230035I16Rik	-	RIKEN cDNA C230035I16 gene	ncRNA
common_peak2-27615-8-9--0.316705676939792-1.03275496310833	chr3	104531542	104532074	+	0	NA	Intergenic	MER45B|DNA|Tip100	48657	NM_183224	329731	Mm.389494	NM_183224	ENSMUSG00000055865	Fam19a3	7530404M11Rik|TAFA3|Tafa-3	family with sequence similarity 19, member A3	protein-coding
common_peak2-24273-39-54--0.165598466605506-0.353756356258781	chr16	95701778	95703202	+	0	NA	intron (NM_133659, intron 2 of 10)	intron (NM_133659, intron 2 of 10)	49482	NM_133659	13876	Mm.164531	NM_133659	ENSMUSG00000040732	Erg	D030036I24Rik	avian erythroblastosis virus E-26 (v-ets) oncogene related	protein-coding
unique_peak2-37642-8-30--1.9489738924393-3.2467506969819	chr5	76931149	76932228	+	0	NA	intron (NR_033501, intron 2 of 2)	intron (NR_033501, intron 2 of 2)	18586	NR_033501	639545	Mm.478255	NR_033501		Gm7271	EG639545	predicted gene 7271	pseudo
common_peak1-14679-10-4-1.03448725012141-1.5150158574804	chr3	63892787	63893317	+	0	NA	intron (NM_019918, intron 2 of 5)	intron (NM_019918, intron 2 of 5)	7488	NM_019918	56544	Mm.57069	NM_019918	ENSMUSG00000027824	Vmn2r1	Casrl1|EG56544|V2r83	vomeronasal 2, receptor 1	protein-coding
common_peak1-17153-17-37--1.02963117523855-1.57996244908225	chr6	118138553	118139410	+	0	NA	intron (NM_001080780, intron 1 of 18)	intron (NM_001080780, intron 1 of 18)	8781	NM_009050	19713	Mm.57199	NM_009050	ENSMUSG00000030110	Ret	PTC|RET51|RET9|c-Ret	ret proto-oncogene	protein-coding
unique_peak1-174-13-1-2.77847203063777-3.64038867156802	chr1	74168264	74169003	+	0	NA	intron (NM_001289895, intron 1 of 32)	intron (NM_001289895, intron 1 of 32)	2388	NM_027884	21961	Mm.309975	NM_027884	ENSMUSG00000055322	Tns1	1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns	tensin 1	protein-coding
unique_peak1-3921-12-7-0.648775985087639-0.697979855752659	chr2	25468528	25469125	+	0	NA	intron (NM_029859, intron 6 of 13)	intron (NM_029859, intron 6 of 13)	4372	NM_029859	77058	Mm.478493	NM_029859	ENSMUSG00000026940	Ccdc183	4921530D09Rik|Cccd183|Kiaa1984	coiled-coil domain containing 183	protein-coding
common_peak2-22990-31-36-0.0157853051841732-0.304004708442489	chr14	57664148	57665695	+	0	NA	intron (NM_016975, intron 1 of 1)	intron (NM_016975, intron 1 of 1)	11639	NM_001271623	14611	Mm.57207	NM_016975		Gja3	Cnx46|Cx43|Cx46|Gja-3	gap junction protein, alpha 3	protein-coding
unique_peak1-2944-7-4-0.477162735410827-1.09384600808989	chr17	66357270	66357782	+	0	NA	intron (NM_001025572, intron 8 of 12)	RMER13B|LTR|ERVK	-56999	NM_023053	65960	Mm.10153	NM_023053	ENSMUSG00000024098	Twsg1	1810013J15Rik|9030422N06Rik|AW552143|D17Ertd403e|Tsg|Twg	twisted gastrulation homolog 1 (Drosophila)	protein-coding
common_peak1-17155-11-17--0.661231417190699-0.58239619684445	chr6	118455265	118455963	+	0	NA	intron (NM_001081112, intron 33 of 33)	intron (NM_001081112, intron 33 of 33)	-26323	NM_011763	22750	Mm.106970	NM_011763	ENSMUSG00000072623	Zfp9	1810048F22Rik|AU016736|Krox-4|Zfp-9|mszf79-2	zinc finger protein 9	protein-coding
common_peak1-14570-48-14-2.0640365556263-7.62480093858041	chr3	37747320	37748591	+	0	NA	Intergenic	L1M3|LINE|L1	-49780	NR_040559	626410	Mm.389417	NR_040559		Gm20755	-	predicted gene, 20755	ncRNA
common_peak2-21263-47-59-0.027950829158029-0.30826857217007	chr11	69661834	69663152	+	0	NA	intron (NR_033133, intron 5 of 6)	intron (NR_033133, intron 5 of 6)	2347	NR_033133	70310	Mm.28874	NM_023564	ENSMUSG00000019461	Plscr3	2210403O21Rik|2610037N06Rik|ESTM3|X83310	phospholipid scramblase 3	protein-coding
common_peak1-15551-15-20--0.380152672223105-0.397739447719386	chr4	123412250	123412931	+	0	NA	3' UTR (NM_023423, exon 5 of 5)	3' UTR (NM_023423, exon 5 of 5)	14952	NM_023423	68050	Mm.27903	NM_023423		Akirin1	6330407G11Rik	akirin 1	protein-coding
unique_peak1-3084-14-1-2.89921616035764-3.91338994363176	chr18	23752076	23752771	+	0	NA	intron (NM_001285807, intron 9 of 24)	intron (NM_001285807, intron 9 of 24)	96440	NM_001285810	13527	Mm.94371	NM_010087	ENSMUSG00000024302	Dtna	2210407P21Rik|DTN-A|Dtn|Gm19389|a-DB-1|adbn	dystrobrevin alpha	protein-coding
common_peak1-15891-10-9-0.0344872501214071-1.05503135781948	chr5	13959892	13960339	+	0	NA	Intergenic	Intergenic	-65161	NM_011348	20349	Mm.134093	NM_011348	ENSMUSG00000063531	Sema3e	6430702L12|AA408817|Semah|mKIAA0331	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E	protein-coding
unique_peak1-5406-9-0-3.18961340640422-3.01029995663981	chr5	105826937	105827488	+	0	NA	Intergenic	Intergenic	-17582	NM_001033550	433926	Mm.439781	NM_001033550	ENSMUSG00000070639	Lrrc8b	R75581|Ta-lrrp|mKIAA0231	leucine rich repeat containing 8 family, member B	protein-coding
unique_peak2-35080-5-10--1.16381195464315-1.33892459842472	chr16	16359173	16359570	+	0	NA	promoter-TSS (NM_001276341)	promoter-TSS (NM_001276341)	-247	NM_001276340	74006	Mm.218820	NM_152816	ENSMUSG00000022789	Dnm1l	6330417M19Rik|AI450666|Dlp1|Dnmlp1|Drp1|python	dynamin 1-like	protein-coding
common_peak2-20820-26-28-0.0699180970308904-0.316008636696532	chr10	128303255	128304011	+	0	NA	intron (NM_025364, intron 9 of 10)	intron (NM_025364, intron 9 of 10)	25141	NM_010272	14561	Mm.299218	NM_010272		Gdf11	BMP-11|Bmp11	growth differentiation factor 11	protein-coding
unique_peak1-1041-13-4-1.45654393575041-2.23384849113406	chr11	77260173	77260736	+	0	NA	intron (NM_001291190, intron 12 of 13)	intron (NM_001291190, intron 12 of 13)	-16961	NM_139129	216961	Mm.33477	NM_139128	ENSMUSG00000020836	Coro6	-	coronin 6	protein-coding
unique_peak2-39067-7-6--0.00826409175941478-0.97990265578305	chr8	72137004	72137431	+	0	NA	intron (NM_001045553, intron 4 of 4)	MurSatRep1|Unknown|Unknown	11857	NM_001045553	234362	Mm.458487	NM_172754	ENSMUSG00000060427	Zfp868	AI449175|AW108241|C530032E20|mszf62	zinc finger protein 868	protein-coding
common_peak1-18091-8-8--0.164702583494742-1.00793137938329	chr8	106135537	106136036	+	0	NA	intron (NR_045730, intron 1 of 4)	RLTR20A1|LTR|ERVK	8087	NR_045730	71058	Mm.67707	NR_045730		4933400L20Rik	-	RIKEN cDNA 4933400L20 gene	ncRNA
common_peak2-20662-2-8--2.08737925770563-1.65811743852845	chr10	82955104	82955456	+	0	NA	exon (NM_153543, exon 22 of 23)	exon (NM_153543, exon 22 of 23)	41605	NM_153543	216188	Mm.263138	NM_153543	ENSMUSG00000020256	Aldh1l2	D330038I09Rik|mtFDH	aldehyde dehydrogenase 1 family, member L2	protein-coding
common_peak2-28021-11-21--0.950738034385684-0.991115276827166	chr4	48124850	48125404	+	0	NA	Intergenic	Intergenic	-12664	NM_026343	67727	Mm.171334	NM_026343	ENSMUSG00000061455	Stx17	4833418L03Rik|6330411F21Rik|9030425C21Rik|AW048351	syntaxin 17	protein-coding
unique_peak1-1644-7-2-1.21412832957703-1.45399745587252	chr13	52820076	52820538	+	0	NA	Intergenic	Intergenic	32267	NR_027893	105404	Mm.184173	NR_027893		BB123696	-	expressed sequence BB123696	ncRNA
unique_peak2-35999-3-9--1.73591118484664-1.57096726280955	chr19	37428324	37428759	+	0	NA	Intergenic	Intergenic	-22352	NM_010615	16551	Mm.42203	NM_010615	ENSMUSG00000012443	Kif11	Eg5|Kif8|Kifl1|Knsl1	kinesin family member 11	protein-coding
common_peak2-32429-4-8--1.19338551529556-1.21878474469819	chrX	167033102	167033449	+	0	NA	Intergenic	Intergenic	-616426	NR_029457	654820	Mm.34441	NM_001039559	ENSMUSG00000072844	G530011O06Rik	-	RIKEN cDNA G530011O06 gene	ncRNA
common_peak1-9041-11-19--0.813234510635749-0.769930178837768	chr11	62820351	62820901	+	0	NA	Intergenic	Intergenic	-54535	NM_027660	71062	Mm.23534	NM_027660	ENSMUSG00000042189	Tekt3	4933407G07Rik	tektin 3	protein-coding
common_peak1-19309-9-10--0.269818212233077-1.05503135781948	chr9	122351346	122351800	+	0	NA	Intergenic	L1MDb|LINE|L1	-43654	NR_045967	654800	Mm.393956	NR_045967		A730085K08Rik	-	RIKEN cDNA A730085K08 gene	ncRNA
common_peak2-24975-393-569-0.464237161764654-7.87992987600324	chr18	6489835	6491457	+	0	NA	promoter-TSS (NR_035446)	promoter-TSS (NR_035446)	-2	NR_035446	100316773		NR_035446		Mir1893	Mirn1893|mmu-mir-1893	microRNA 1893	ncRNA
unique_peak1-6874-6-0-2.5653981103803-2.10720996964787	chr8	88806756	88807145	+	0	NA	Intergenic	Intergenic	283539	NM_172912	244562	Mm.67485	NM_172912	ENSMUSG00000036872	Abcc12	4930467B22Rik|MRP9	ATP-binding cassette, sub-family C (CFTR/MRP), member 12	protein-coding
common_peak1-15465-6-8--0.60452689106201-1.03789460276074	chr4	103249784	103250305	+	0	NA	Intergenic	Intergenic	194939	NR_040673	622167	Mm.244115	NR_040673	ENSMUSG00000086136	Gm12718	OTTMUSG00000008109	predicted gene 12718	ncRNA
unique_peak1-1790-15-5-1.4272022498345-1.61682445937017	chr14	21086850	21087609	+	0	NA	intron (NM_029006, intron 1 of 4)	B4|SINE|B4	1155	NM_029006	74571	Mm.105571	NM_029006	ENSMUSG00000023387	Kcnk16	4731413G05Rik|TALK-1|TALK1	potassium channel, subfamily K, member 16	protein-coding
common_peak2-20968-16-37--1.12966387117552-1.94848218498813	chr11	20477035	20478200	+	0	NA	intron (NM_021372, intron 1 of 1)	intron (NM_021372, intron 1 of 1)	34361	NM_021372	58172	Mm.339676	NM_021372	ENSMUSG00000049800	Sertad2	AB041541|AU021878|Kiaa0127|SEI-2|Sei2|TRIP-Br2|mKIAA0127	SERTA domain containing 2	protein-coding
common_peak1-8510-51-59-0.168033229994054-0.411401232354538	chr10	82858067	82859806	+	0	NA	Intergenic	L1_Mus1|LINE|L1	35970	NM_026579	28109	Mm.196210	NM_026579	ENSMUSG00000020255	D10Wsu102e	AI747614|C430041I18Rik	DNA segment, Chr 10, Wayne State University 102, expressed	protein-coding
common_peak1-12956-13-29--1.12841856497075-1.46151065785802	chr19	55099321	55099971	+	0	NA	Intergenic	Lx8|LINE|L1	74291	NM_008149	14732	Mm.210196	NM_008149	ENSMUSG00000024978	Gpam	GPAT|GPAT1	glycerol-3-phosphate acyltransferase, mitochondrial	protein-coding
common_peak1-8668-56-149--0.993222865056637-5.7105416653496	chr10	128493152	128495043	+	0	NA	Intergenic	L1Md_F|LINE|L1	-9980	NM_001085477	544748	Mm.457884	NM_001085477	ENSMUSG00000056853	Olfr765	-	olfactory receptor 765	protein-coding
unique_peak2-33477-6-12--1.13504160776079-1.45089835786865	chr11	69672575	69673145	+	0	NA	promoter-TSS (NM_031880)	promoter-TSS (NM_031880)	-628	NM_031880	83813	Mm.28874	NM_031880	ENSMUSG00000001583	Tnk1	Kos1|Tnk1a|Tnk1b	tyrosine kinase, non-receptor, 1	protein-coding
common_peak1-17928-13-14--0.12841856497075-0.301029995663977	chr7	127025943	127026516	+	0	NA	intron (NM_001163703, intron 1 of 2)	L1_Mus1|LINE|L1	12743	NM_173408	233805	Mm.31539	NM_173408	ENSMUSG00000048787	Dcun1d3	1700020A13Rik|BC030335	DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)	protein-coding
common_peak1-17193-17-17-0.0483713367627256-0.325169893479371	chr6	124745407	124746197	+	0	NA	Intergenic	RMER12B|LTR|ERVK	-13157	NM_013539	14794	Mm.261906	NM_013539	ENSMUSG00000038451	Spsb2	AI461677|C9|Grcc9|SSB2	splA/ryanodine receptor domain and SOCS box containing 2	protein-coding
common_peak2-23353-86-112-0.155456831617165-0.47996040811485	chr15	41788141	41789896	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-87752	NM_175456	223513	Mm.148913	NM_175456	ENSMUSG00000042895	Abra	C130068O12Rik|STARS	actin-binding Rho activating protein	protein-coding
common_peak1-8782-13-8-0.608547029195456-0.660903317613904	chr11	8704776	8705476	+	0	NA	Intergenic	Intergenic	-140588	NM_001083587	319939	Mm.337820	NM_001083587	ENSMUSG00000020422	Tns3	BC023928|F830010I22Rik|TEM6|Tens1	tensin 3	protein-coding
unique_peak1-3653-24-2-3.20824740204656-6.14077709290365	chr19	38632047	38633281	+	0	NA	intron (NM_019588, intron 1 of 31)	intron (NM_019588, intron 1 of 31)	33977	NM_019588	74055	Mm.34031	NM_019588	ENSMUSG00000024998	Plce1	4933403A21Rik|PLCepsilon|Plce|mKIAA1516	phospholipase C, epsilon 1	protein-coding
common_peak2-22262-13-6-0.971117108580164-1.01572999746118	chr13	5842923	5843352	+	0	NA	Intergenic	Intergenic	14201	NR_045891	71867	Mm.179181	NR_045891		1700016G22Rik	-	RIKEN cDNA 1700016G22 gene	ncRNA
common_peak1-18070-10-13--0.450939577048835-0.386243247519795	chr8	14089793	14090313	+	0	NA	intron (NM_001034862, intron 1 of 5)	intron (NM_001034862, intron 1 of 5)	274	NM_001034862	234086	Mm.268896	NM_001034862	ENSMUSG00000051978	Erich1	-	glutamate rich 1	protein-coding
common_peak2-25719-17-8-1.04837133676273-1.30305656033811	chr19	23140257	23140665	+	0	NA	Intergenic	Intergenic	-75255	NM_010638	16601	Mm.291595	NM_010638	ENSMUSG00000033863	Klf9	2310051E17Rik|AA589643|BTEB-1|Bteb1|ENSMUSG00000055440|Gm9971	Kruppel-like factor 9	protein-coding
unique_peak1-3395-10-6-0.549060422951165-1.21398586181642	chr19	4220135	4220723	+	0	NA	intron (NM_019952, intron 2 of 2)	intron (NM_019952, intron 2 of 2)	6037	NM_019952	56708	Mm.347919	NM_019952		Clcf1	Bsf3|CLC	cardiotrophin-like cytokine factor 1	protein-coding
common_peak2-20338-2-6--1.72480917832092-1.26211192963361	chr10	4612611	4612958	+	0	NA	Intergenic	Intergenic	71708	NM_025995	67141	Mm.197520	NM_025995	ENSMUSG00000019773	Fbxo5	2510044I10Rik|C85305|Emi1|Fbxo31	F-box protein 5	protein-coding
common_peak2-31130-18-7-1.31291915122835-1.71830443967823	chr8	34635890	34636409	+	0	NA	Intergenic	Intergenic	41366	NR_033589	628431	Mm.376526	NR_033589		Hmgb1-rs17	Hmg1-rs17	high mobility group box 1, related sequence 17	pseudo
common_peak2-24005-32-31-0.27909201921966-0.499999074040591	chr16	20732505	20733472	+	0	NA	promoter-TSS (NM_009893)	promoter-TSS (NM_009893)	-212	NM_001278041	12667	Mm.20457	NM_009893	ENSMUSG00000006958	Chrd	Chd	chordin	protein-coding
common_peak2-24937-8-7-0.00522241794757061-1.00793137938329	chr17	94834893	94835279	+	0	NA	Intergenic	Intergenic	314146	NM_176917	76781	Mm.139146	NM_176917	ENSMUSG00000055660	Mettl4	2410198H06Rik|A730091E08Rik|AV296509|HsT661	methyltransferase like 4	protein-coding
common_peak2-20947-39-34-0.486478229974187-0.89292906939411	chr11	12409301	12410649	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-45012	NM_001282993	12808	Mm.22847	NM_172496	ENSMUSG00000020173	Cobl	-	cordon-bleu WH2 repeat	protein-coding
common_peak2-26491-13-5-1.19350952991661-1.95509489018123	chr2	83759122	83759538	+	0	NA	intron (NM_027964, intron 6 of 8)	PB1D10|SINE|Alu	22053	NM_027964	71861	Mm.116957	NM_027964	ENSMUSG00000034552	Zswim2	1700025P14Rik|4933437F18Rik|MEX	zinc finger SWIM-type containing 2	protein-coding
common_peak2-29297-33-54--0.450022150999131-0.755494033265326	chr5	144767905	144769001	+	0	NA	intron (NM_177682, intron 6 of 14)	ORR1A2-int|LTR|MaLR	7269	NM_177682	231874	Mm.320432	NM_177682	ENSMUSG00000029617	Ccz1	AU022870	CCZ1 vacuolar protein trafficking and biogenesis associated	protein-coding
unique_peak1-2394-16-7-1.11826364226806-1.23399803405144	chr15	97750168	97751025	+	0	NA	Intergenic	L1MEd|LINE|L1	-11869	NM_009504	22337	Mm.245084	NM_009504	ENSMUSG00000022479	Vdr	Nr1i1	vitamin D receptor	protein-coding
unique_peak1-4066-11-4-1.18676548936425-1.68134727924692	chr2	65160363	65160857	+	0	NA	intron (NM_177074, intron 11 of 11)	intron (NM_177074, intron 11 of 11)	41473	NM_177074	320106	Mm.227703	NM_177074	ENSMUSG00000061171	Slc38a11	9330158F14Rik	solute carrier family 38, member 11	protein-coding
unique_peak2-32566-0-6--3.64748585253182-1.56314192529759	chr1	81618770	81619024	+	0	NA	Intergenic	RLTRETN_Mm|LTR|ERVK	-509594	NR_105762	102466629		NR_105762	miRBase:MI0021872	Mir6344	mmu-mir-6344	microRNA mir-6344	ncRNA
common_peak2-31734-16-12-0.417823924126969-0.489164546851866	chr9	14365211	14365775	+	0	NA	intron (NM_001081395, intron 7 of 12)	intron (NM_001081395, intron 7 of 12)	53951	NM_001081395	75723	Mm.159552	NM_001081395	ENSMUSG00000013076	Amotl1	2310010G08Rik|2310067L22Rik|4932416D09Rik|JEAP|mFLJ00155	angiomotin-like 1	protein-coding
unique_peak2-39782-7-18--1.4488366831454-1.38887104242188	chrX	9662334	9663180	+	0	NA	intron (NM_016911, intron 1 of 9)	intron (NM_016911, intron 1 of 9)	32030	NM_016911	51795	Mm.1927	NM_016911	ENSMUSG00000090084	Srpx	drs|drs-1|drs-2|mDRS-1|mDRS-2	sushi-repeat-containing protein	protein-coding
common_peak2-28930-17-23--0.366666162516118-0.383878263347744	chr5	93295464	93296618	+	0	NA	intron (NM_001077595, intron 1 of 9)	intron (NM_001077595, intron 1 of 9)	-30978	NM_001077596	27428	Mm.46014	NM_015756	ENSMUSG00000029381	Shroom3	AL022960|D5Ertd287e|Shrm|Shrm3	shroom family member 3	protein-coding
common_peak2-27159-114-196--0.158097297748009-0.511282245597493	chr3	30792728	30794096	+	0	NA	intron (NM_001286994, intron 3 of 3)	intron (NM_001286994, intron 3 of 3)	38540	NM_001286994	71862	Mm.272019	NM_027965	ENSMUSG00000037661	Gpr160	1700025D19Rik|GPCR150	G protein-coupled receptor 160	protein-coding
common_peak2-28044-13-7-0.778472030637769-0.817533494790411	chr4	57844870	57845296	+	0	NA	Intergenic	Intergenic	-13037	NM_009649	11641	Mm.467752	NM_009649	ENSMUSG00000038729	Akap2	AA959716|AI649048|Akap-2|Akap-kl|B230340M18Rik|Prka2	A kinase (PRKA) anchor protein 2	protein-coding
common_peak2-19894-12-12--0.0516637330534535-0.309718203022949	chr1	105866337	105866881	+	0	NA	Intergenic	Intergenic	-798787	NM_011800	23836	Mm.103640	NM_011800	ENSMUSG00000050840	Cdh20	Cdh7	cadherin 20	protein-coding
common_peak2-29693-33-20-0.939020139746768-1.77675427888235	chr6	73248226	73249019	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	50123	NM_019879	56451	Mm.29845	NM_019879	ENSMUSG00000052738	Suclg1	1500000I01Rik|Sucla1	succinate-CoA ligase, GDP-forming, alpha subunit	protein-coding
unique_peak2-36306-3-5--0.998945590680433-0.96108193396963	chr2	75639953	75640394	+	0	NA	Intergenic	Intergenic	-30061	NM_172666	228061	Mm.31227	NM_172666	ENSMUSG00000042410	Agps	5832437L22|9930035G10Rik|AW123847|Adaps|Adas|Adhaps|Adps|Aldhpsy|bs2	alkylglycerone phosphate synthase	protein-coding
common_peak1-15749-14-23--0.685746340363512-0.669502273696327	chr4	149484649	149485274	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-8492	NM_019741	56485	Mm.260220	NM_019741	ENSMUSG00000028976	Slc2a5	AI526984|Glut5|Slc5a	solute carrier family 2 (facilitated glucose transporter), member 5	protein-coding
common_peak2-26413-16-6-1.31090872021046-1.49151883326344	chr2	59672871	59673304	+	0	NA	intron (NM_001290659, intron 20 of 25)	intron (NM_001290659, intron 20 of 25)	47576	NM_001159636	72137	Mm.288734	NM_028118	ENSMUSG00000026988	Wdsub1	1700048E19Rik|2610014F08Rik	WD repeat, SAM and U-box domain containing 1	protein-coding
unique_peak1-4432-13-2-2.19350952991661-3.03832868024006	chr2	168472821	168473513	+	0	NA	intron (NM_001289446, intron 22 of 27)	intron (NM_001289446, intron 22 of 27)	-6908	NR_105971	102466784		NR_105971		Mir7004	mmu-mir-7004	microRNA mir-7004	ncRNA
common_peak1-11740-21-19-0.247561170378873-0.427564438475253	chr16	34784500	34785350	+	0	NA	promoter-TSS (NM_139300)	promoter-TSS (NM_139300)	-111	NM_139300	107589	Mm.33360	NM_139300	ENSMUSG00000022836	Mylk	9530072E15Rik|A930019C19Rik|AW489456|KRP|MLCK108|MLCK210|Mlck|smMLCK	myosin, light polypeptide kinase	protein-coding
unique_peak1-4016-10-5-0.771452844287613-1.33892459842472	chr2	38530545	38531072	+	0	NA	Intergenic	Intergenic	-31382	NM_011187	19177	Mm.389251	NM_011187	ENSMUSG00000026750	Psmb7	AU020723|MC14	proteasome (prosome, macropain) subunit, beta type 7	protein-coding
common_peak2-26040-19-9-1.08075923177432-1.37307999835977	chr2	144441118	144441655	+	0	NA	intron (NM_025314, intron 2 of 5)	intron (NM_025314, intron 2 of 5)	15697	NM_025314	66044	Mm.28109	NM_025314	ENSMUSG00000027430	Dtd1	0610006H08Rik|DUE-B|Hars2	D-tyrosyl-tRNA deacylase 1	protein-coding
common_peak2-22482-23-24-0.0779113147343562-0.318406410381916	chr13	49186523	49187429	+	0	NA	intron (NM_029361, intron 6 of 27)	intron (NM_029361, intron 6 of 27)	56721	NM_029361	75607	Mm.342723	NM_029361	ENSMUSG00000037989	Wnk2	1810073P09Rik|AW122246|ESTM15|X83337|mKIAA1760	WNK lysine deficient protein kinase 2	protein-coding
common_peak2-19571-12-11-0.0638134843664826-0.337263207250336	chr1	12777330	12777770	+	0	NA	intron (NM_001198566, intron 3 of 20)	B1_Mur2|SINE|Alu	68924	NM_172294	240725	Mm.45563	NM_172294	ENSMUSG00000016918	Sulf1	AI467640|AW121680|mKIAA1077	sulfatase 1	protein-coding
common_peak2-29690-45-28-1.0023770302173-2.62199132005206	chr6	72926958	72927867	+	0	NA	Intergenic	Intergenic	-18670	NM_001190327	19240	Mm.3532	NM_025284	ENSMUSG00000079523	Tmsb10	Ptmb10|Tb10	thymosin, beta 10	protein-coding
unique_peak1-1584-10-5-0.771452844287613-1.33892459842472	chr13	33027247	33027725	+	0	NA	Intergenic	RMER1B|Other|Other	-29896	NM_011454	20708	Mm.36526	NM_011454	ENSMUSG00000042842	Serpinb6b	NK13|Spi12|ovalbumin	serine (or cysteine) peptidase inhibitor, clade B, member 6b	protein-coding
common_peak2-24464-29-42--0.313974674086987-0.439405572480898	chr17	24072711	24073549	+	0	NA	Intergenic	Intergenic	-5833	NM_011321	20234	Mm.390958	NM_011321	ENSMUSG00000024128	Sbp	AV082137|AV082259|p25	spermine binding protein	protein-coding
unique_peak2-37537-5-7--0.704380336005853-1.01466476204226	chr5	27790185	27790657	+	0	NA	intron (NM_001136060, intron 4 of 25)	MYSERV16_I-int|LTR|ERVK	37511	NM_028561	73526	Mm.389608	NM_028561	ENSMUSG00000048703	Speer4b	1700081O22Rik|SPEER-4B	spermatogenesis associated glutamate (E)-rich protein 4b	protein-coding
common_peak2-22232-9-14--0.717277189204299-0.53895475198017	chr13	5864694	5865564	+	0	NA	intron (NM_011803, intron 2 of 3)	intron (NM_011803, intron 2 of 3)	4394	NM_011803	23849	Mm.275036	NM_011803	ENSMUSG00000000078	Klf6	AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9	Kruppel-like factor 6	protein-coding
unique_peak2-36334-4-5--0.608423014574403-0.909929411522249	chr2	90952031	90952429	+	0	NA	intron (NM_011355, intron 2 of 4)	(CA)n|Simple_repeat|Simple_repeat	-6071	NM_008653	17868	Mm.10728	NM_008653	ENSMUSG00000002100	Mybpc3	-	myosin binding protein C, cardiac	protein-coding
common_peak1-15021-22-34--0.481998911857562-0.600314449189972	chr3	116968083	116968955	+	0	NA	Intergenic	Intergenic	95275	NM_177664	229791	Mm.140138	NM_177664	ENSMUSG00000044667	Lppr4	A330086D10|D3Bwg0562e|PRG-1|mKIAA0455	lipid phosphate phosphatase-related protein type 4	protein-coding
common_peak1-11329-67-53-0.789523980619527-2.71142772243524	chr15	85684035	85686270	+	0	NA	intron (NM_001033337, intron 13 of 13)	intron (NM_001033337, intron 13 of 13)	-4985	NM_001168672	29870	Mm.20858	NM_013882	ENSMUSG00000022385	Gtse1	B99|Gtse-1	G two S phase expressed protein 1	protein-coding
common_peak1-11862-10-25--1.34402437313232-1.74319850844462	chr16	92609530	92610055	+	0	NA	intron (NM_001111022, intron 6 of 6)	intron (NM_001111022, intron 6 of 6)	87782	NM_001111023	12394	Mm.4081	NM_009821	ENSMUSG00000022952	Runx1	AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b	runt related transcription factor 1	protein-coding
common_peak1-8793-59-62-0.348084077372661-0.797828185802482	chr11	17257188	17258576	+	0	NA	Intergenic	RMER15|LTR|ERVL	100261	NM_020558	57316	Mm.287982	NM_020558	ENSMUSG00000000581	C1d	1110036E10Rik|AI875855|SUN-CoR	C1D nuclear receptor co-repressor	protein-coding
common_peak2-31959-20-30--0.466121525795682-0.569352520859861	chr9	65826909	65827767	+	0	NA	intron (NM_173185, intron 4 of 13)	intron (NM_173185, intron 4 of 13)	70521	NM_173185	214897	Mm.325816	NM_173185	ENSMUSG00000032384	Csnk1g1	9130020E21Rik	casein kinase 1, gamma 1	protein-coding
unique_peak1-4734-17-2-2.63333383748388-3.75443312462699	chr3	107714511	107715486	+	0	NA	Intergenic	Intergenic	-15867	NR_015459	329735	Mm.270500	NM_177858	ENSMUSG00000086968	4933431E20Rik	-	RIKEN cDNA 4933431E20 gene	ncRNA
unique_peak1-1115-12-1-2.64877598508764-3.36932189928148	chr11	94373979	94374518	+	0	NA	intron (NM_170671, intron 4 of 18)	intron (NM_170671, intron 4 of 18)	8568	NM_170671	104601	Mm.84725	NM_170671	ENSMUSG00000039110	Mycbpap	4932408B01Rik|AMAP-1|AW125474	MYCBP associated protein	protein-coding
common_peak2-28084-35-24-0.78751406868778-1.48724131519612	chr4	83314868	83315911	+	0	NA	intron (NM_001081012, intron 16 of 25)	intron (NM_001081012, intron 16 of 25)	143940	NM_001081012	320226	Mm.180032	NM_029117	ENSMUSG00000052407	Ccdc171	4930418J05Rik|4930473A06Rik|A330015D16Rik	coiled-coil domain containing 171	protein-coding
common_peak2-30530-21-12-0.869049547125143-1.18646456559501	chr7	66586583	66587298	+	0	NA	Intergenic	Intergenic	-7421	NR_015479	330544	Mm.9002	NR_015479		C230091D08Rik	-	RIKEN cDNA C230091D08 gene	ncRNA
unique_peak2-34573-7-7--0.200909169701811-0.97990265578305	chr14	66867373	66867813	+	0	NA	intron (NM_172498, intron 1 of 29)	intron (NM_172498, intron 1 of 29)	32296	NM_172498	19229	Mm.21613	NM_172498	ENSMUSG00000059456	Ptk2b	CADTK|CAKB|CAKbeta|E430023O05Rik|FADK2|FAK2|PYK2|Raftk	PTK2 protein tyrosine kinase 2 beta	protein-coding
unique_peak1-4631-8-3-1.00522241794757-1.39487600375387	chr3	84135589	84136107	+	0	NA	Intergenic	Intergenic	-27151	NM_001271726	80890	Mm.44876	NM_030706	ENSMUSG00000027993	Trim2	mKIAA0517|narf	tripartite motif-containing 2	protein-coding
common_peak2-31533-20-20-0.0957573618124323-0.321718508207528	chr8	110941054	110941786	+	0	NA	Intergenic	Intergenic	167157	NR_077224	109215	Mm.65282	NR_077224		3010033K07Rik	-	RIKEN cDNA 3010033K07 gene	ncRNA
unique_peak2-39609-5-23--2.28934283672701-3.02403524675804	chr9	82829600	82830517	+	0	NA	intron (NM_001081216, intron 7 of 39)	intron (NM_001081216, intron 7 of 39)	39038	NM_001081216	83946	Mm.221688	NM_031879	ENSMUSG00000032253	Phip	2810004D21Rik|4632404O06Rik|Ndrp|Wdr11	pleckstrin homology domain interacting protein	protein-coding
unique_peak1-4603-8-2-1.42025991722641-1.65811743852845	chr3	63941199	63941649	+	0	NA	promoter-TSS (NM_001104592)	promoter-TSS (NM_001104592)	-22	NM_001104592	100125586	Mm.469888	NM_001104592	ENSMUSG00000043897	Vmn2r2	ENSMUSG00000043897	vomeronasal 2, receptor 2	protein-coding
common_peak2-24607-12-16--0.4386868561627-0.368541233333383	chr17	33523801	33524359	+	0	NA	intron (NM_009542, intron 1 of 3)	intron (NM_009542, intron 1 of 3)	7502	NM_009542	22643	Mm.4417	NM_009542	ENSMUSG00000055240	Zfp101	AI316498|AI325003	zinc finger protein 101	protein-coding
common_peak2-23663-51-40-0.717371820984489-1.79658675346641	chr15	85424378	85425825	+	0	NA	TTS (NR_040433)	TTS (NR_040433)	-12850	NM_009528	22422	Mm.306946	NM_009528	ENSMUSG00000022382	Wnt7b	Wnt-7b	wingless-type MMTV integration site family, member 7B	protein-coding
common_peak1-19380-18-22--0.210642804828661-0.321718508207525	chrX	37701349	37702159	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-484973	NM_001191032	100504400	Mm.373409	NM_001191032	ENSMUSG00000095240	Cypt14	-	cysteine-rich perinuclear theca 14	protein-coding
common_peak1-9627-10-7-0.356415345008769-1.12966497611638	chr11	121741102	121741627	+	0	NA	Intergenic	Tigger7|DNA|MER2_type	49832	NM_029049	74675	Mm.61213	NM_029049	ENSMUSG00000039198	Ptchd3	4930451E13Rik|4933440L20Rik|RNDEu-3	patched domain containing 3	protein-coding
common_peak2-25808-10-6-0.549060422951165-1.21398586181642	chr19	38004313	38004620	+	0	NA	intron (NM_001099634, intron 37 of 52)	RCHARR1|DNA|MER1_type	113601	NM_001099634	226101	Mm.34674	NM_177035	ENSMUSG00000048612	Myof	2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3	myoferlin	protein-coding
common_peak1-16917-10-10--0.103016273628528-0.301029995663987	chr6	72958550	72959092	+	0	NA	Intergenic	Intergenic	-50079	NM_001190327	19240	Mm.3532	NM_025284	ENSMUSG00000079523	Tmsb10	Ptmb10|Tb10	thymosin, beta 10	protein-coding
common_peak1-16362-19-9-1.08075923177432-1.37307999835977	chr5	122391718	122392566	+	0	NA	intron (NM_007804, intron 2 of 22)	B4A|SINE|B4	93105	NM_175474	231717	Mm.12654	NM_175474	ENSMUSG00000044134	Fam109a	A230106M15Rik|AU017694|IPIP27A|Ses1	family with sequence similarity 109, member A	protein-coding
common_peak2-22740-17-18--0.0296311752385474-0.306899554715732	chr13	109902763	109903383	+	0	NA	intron (NM_011056, intron 3 of 16)	intron (NM_011056, intron 3 of 16)	-211865	NR_030644	100124489		NR_030644		Mir582	Mirn582|mmu-mir-582	microRNA 582	ncRNA
common_peak2-28235-17-33--0.869166503045301-1.12969433525548	chr4	121214437	121215074	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	79975	NM_001099309	666927	Mm.465133	NM_001099309		Gm12887	OTTMUSG00000008910	predicted gene 12887	protein-coding
common_peak2-28938-30-56--0.663214604672868-1.25272902092874	chr5	98029737	98031694	+	0	NA	Intergenic	Intergenic	-144688	NM_010294	14626	Mm.61206	NM_010294	ENSMUSG00000050553	Gk2	GKTA|Gk-rs2	glycerol kinase 2	protein-coding
common_peak1-7901-24-48--0.821499941347492-1.45748092439676	chr1	135728407	135729658	+	0	NA	Intergenic	CT-rich|Low_complexity|Low_complexity	74718	NM_054076	269120	Mm.59985	NM_054076	ENSMUSG00000010311	Optc	-	opticin	protein-coding
unique_peak2-33676-5-6--0.511735258063458-0.947717972411649	chr11	102218263	102218669	+	0	NA	exon (NM_011403, exon 10 of 20)	exon (NM_011403, exon 10 of 20)	8129	NM_011403	20533	Mm.7248	NM_011403	ENSMUSG00000006574	Slc4a1	Ae1|CD233|Empb3|l11Jus51	solute carrier family 4 (anion exchanger), member 1	protein-coding
common_peak1-12659-13-10-0.319040412000471-0.446472590016315	chr18	36408050	36408577	+	0	NA	Intergenic	Lx8|LINE|L1	-32503	NM_008989	19290	Mm.231802	NM_008989		Pura	CAGER-1|Pur-alpha|ssCRE-BP	purine rich element binding protein A	protein-coding
common_peak1-12118-39-69--0.513521770025813-1.04068780415875	chr17	26610373	26612205	+	0	NA	Intergenic	Intergenic	34128	NM_013642	19252	Mm.239041	NM_013642	ENSMUSG00000024190	Dusp1	3CH134|MKP1|Ptpn16|U19515|erp|mkp-1	dual specificity phosphatase 1	protein-coding
unique_peak1-6679-16-8-0.948338640825749-1.02063122982878	chr8	24568176	24568849	+	0	NA	Intergenic	L1M4|LINE|L1	46538	NM_013834	20377	Mm.281691	NM_013834	ENSMUSG00000031548	Sfrp1	2210415K03Rik|AW011917|AW107218|AW742929|sFRP-1	secreted frizzled-related protein 1	protein-coding
common_peak1-7495-45-21-1.40092640670757-4.21528825723629	chr1	10284520	10285995	+	0	NA	Intergenic	MT2B|LTR|ERVL	-62506	NM_001102430	211673	Mm.229141	NM_001102430	ENSMUSG00000067851	Arfgef1	ARFGEP1|BIG1|D130059B05Rik|D730028O18Rik|P200	ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited)	protein-coding
common_peak1-16626-42-40-0.3847773232491-0.755494033265326	chr6	24706962	24708536	+	0	NA	intron (NM_029848, intron 3 of 4)	intron (NM_029848, intron 3 of 4)	9382	NM_029848	77042	Mm.66017	NM_029848		Hyal4	4632428M18Rik|CSHY	hyaluronoglucosaminidase 4	protein-coding
common_peak2-31537-30-74--1.05914328100401-3.21117143901173	chr8	111144834	111146370	+	0	NA	Intergenic	Intergenic	-37025	NR_077224	109215	Mm.65282	NR_077224		3010033K07Rik	-	RIKEN cDNA 3010033K07 gene	ncRNA
common_peak1-13191-31-19-0.903310575925761-1.57996244908225	chr19	20393365	20394545	+	0	NA	Intergenic	Lx6|LINE|L1	71206	NM_010730	16952	Mm.248360	NM_010730	ENSMUSG00000024659	Anxa1	Anx-1|Anx-A1|C430014K04Rik|Lpc-1|Lpc1	annexin A1	protein-coding
common_peak2-26699-4-6--0.830815435910851-0.989110657569874	chr2	127133497	127133846	+	0	NA	Intergenic	B3A|SINE|B2	-28224	NM_010090	13537	Mm.4729	NM_010090	ENSMUSG00000027368	Dusp2	PAC1	dual specificity phosphatase 2	protein-coding
common_peak2-22932-10-8-0.186490343566457-1.078512453669	chr14	46969927	46970355	+	0	NA	Intergenic	Intergenic	-29058	NR_037981	100041724	Mm.383311	NM_001099324	ENSMUSG00000079261	Gm15217	OTTMUSG00000019524	predicted gene 15217	ncRNA
unique_peak1-220-18-3-2.31291915122835-3.35694334496952	chr1	88452309	88453008	+	0	NA	intron (NM_008801, intron 1 of 4)	MTC-int|LTR|MaLR	26418	NM_008801	18582	Mm.12925	NM_008801	ENSMUSG00000026239	Pde6d	AI841218|PrBP/delta	phosphodiesterase 6D, cGMP-specific, rod, delta	protein-coding
common_peak2-20023-15-15-0.0121647505556561-0.30803596071496	chr1	135844746	135845551	+	0	NA	Intergenic	L1MA4A|LINE|L1	-27170	NM_054077	116847	Mm.214514	NM_054077	ENSMUSG00000041577	Prelp	7330409J17Rik|SLRR2A	proline arginine-rich end leucine-rich repeat	protein-coding
common_peak1-15631-48-76--0.295859389460086-0.565429786553928	chr4	133813483	133814842	+	0	NA	Intergenic	ID4|SINE|ID	-4141	NM_001099296	72690	Mm.100168	NM_001099296	ENSMUSG00000050105	Grrp1	2810043G13Rik|Fam110d	glycine/arginine rich protein 1	protein-coding
common_peak1-13225-11-12--0.191746133889479-0.310474156842889	chr19	25244040	25244568	+	0	NA	intron (NM_028785, intron 34 of 47)	intron (NM_028785, intron 34 of 47)	-67388	NM_181404	107351	Mm.260722	NM_181404	ENSMUSG00000032702	Kank1	A930031B09Rik|AU015049|AW121052|Ankrd15|D330024H06Rik|mKIAA0172	KN motif and ankyrin repeat domains 1	protein-coding
common_peak1-8404-49-118--0.88853394028276-3.8330917903166	chr10	69212115	69213669	+	0	NA	intron (NM_170730, intron 1 of 17)	intron (NM_170730, intron 1 of 17)	-175388	NM_170687	11735	Mm.235960	NM_009670	ENSMUSG00000069601	Ank3	2900054D09Rik|AI314020|Ank-3|AnkG|Ankyrin-3|Ankyrin-G	ankyrin 3, epithelial	protein-coding
common_peak2-31668-6-8--0.60452689106201-1.03789460276074	chr8	126775017	126775478	+	0	NA	intron (NM_139272, intron 1 of 15)	intron (NM_139272, intron 1 of 15)	19953	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
common_peak2-31795-19-25--0.297752391479405-0.376654945067947	chr9	35116687	35117594	+	0	NA	Intergenic	Intergenic	28450	NR_040715	71133	Mm.158577	NR_040715		4933422A05Rik	-	RIKEN cDNA 4933422A05 gene	ncRNA
common_peak2-21482-9-11--0.395349094316936-0.344532117358383	chr11	88204429	88205146	+	0	NA	intron (NM_054043, intron 9 of 13)	intron (NM_054043, intron 9 of 13)	38512	NR_039545	100628571		NR_039545	miRBase:MI0016973	Mir378b	mmu-mir-378b	microRNA 378b	ncRNA
common_peak1-10471-75-38-1.45366477288104-7.72785992662612	chr13	111808003	111809975	+	0	NA	Intergenic	Intergenic	210650	NR_045908	73129	Mm.417826	NR_045908		3110015C05Rik	-	RIKEN cDNA 3110015C05 gene	ncRNA
common_peak1-16891-12-21--0.810655633549659-0.713635438203849	chr6	71989782	71990530	+	0	NA	intron (NR_046180, intron 1 of 2)	intron (NR_046180, intron 1 of 2)	2366	NR_046180	330350	Mm.246787	NR_046180		9130221F21Rik	9130221F21	RIKEN cDNA 9130221F21 gene	ncRNA
common_peak2-28017-15-22--0.511397205501357-0.50761186003982	chr4	46649815	46650598	+	0	NA	intron (NM_198664, intron 3 of 12)	B1_Mus1|SINE|Alu	12865	NM_198664	381605	Mm.331595	NM_198664	ENSMUSG00000039813	Tbc1d2	A630005A06Rik|BC022630|Gm1037|PARIS-1|PARIS1	TBC1 domain family, member 2	protein-coding
unique_peak1-4362-13-6-0.971117108580164-1.01572999746118	chr2	156455448	156456157	+	0	NA	intron (NM_001277187, intron 1 of 11)	intron (NM_001277187, intron 1 of 11)	16369	NM_001277186	228836	Mm.22094	NM_146128	ENSMUSG00000061689	Dlgap4	AI225853|BC024558|DAP-4|DAP4|SAPAP-4|Sapap4|WBP16	discs, large homolog-associated protein 4 (Drosophila)	protein-coding
unique_peak1-4757-7-1-1.79909083029819-1.80617997398389	chr3	120017587	120018111	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-531543	NM_019550	56195	Mm.29966	NM_019550	ENSMUSG00000028134	Ptbp2	Ptb2|brPTB|nPTB	polypyrimidine tract binding protein 2	protein-coding
common_peak2-19557-72-110--0.125832053477788-0.366599446653019	chr1	6213892	6215474	+	0	NA	intron (NM_009826, intron 1 of 23)	B2_Mm1t|SINE|B2	9940	NM_009826	12421	Mm.293811	NM_009826	ENSMUSG00000025907	Rb1cc1	2900055E04Rik|5930404L04Rik|Cc1|FIP200|LaXp180	RB1-inducible coiled-coil 1	protein-coding
unique_peak2-32759-7-16--1.28837201095215-1.08658567012551	chr1	170867348	170867980	+	0	NA	Intergenic	Intergenic	446890	NR_105766	102465178		NR_105766	miRBase:MI0021876	Mir6348	mmu-mir-6348	microRNA mir-6348	ncRNA
unique_peak1-74-14-5-1.31425365963649-1.4372489031793	chr1	37697534	37698268	+	0	NA	intron (NM_028096, intron 2 of 9)	intron (NM_028096, intron 2 of 9)	78755	NM_028096	72097	Mm.142607	NM_028096	ENSMUSG00000026090	2010300C02Rik	-	RIKEN cDNA 2010300C02 gene	protein-coding
common_peak1-17111-24-28--0.0647710923598552-0.301029995663979	chr6	113695709	113696758	+	0	NA	3' UTR (NM_009723, exon 22 of 22)	3' UTR (NM_009723, exon 22 of 22)	-5558	NM_024206	110379	Mm.29296	NM_024206	ENSMUSG00000030298	Sec13	1110003H02Rik|Sec13l1|Sec13r	SEC13 homolog (S. cerevisiae)	protein-coding
common_peak2-24737-14-32--1.14517795900081-1.66700866096458	chr17	47737069	47738061	+	0	NA	TTS (NM_007632)	TTS (NM_007632)	7149	NM_007632	12445	Mm.27291	NM_007632	ENSMUSG00000034165	Ccnd3	9230106B05Rik|AA682053|AL024085|AW146355|C78795	cyclin D3	protein-coding
common_peak1-8298-35-64--0.59099755456595-1.20183724428356	chr10	34282066	34283118	+	0	NA	intron (NM_010237, intron 3 of 8)	intron (NM_010237, intron 3 of 8)	79386	NM_010237	14302	Mm.332432	NM_010237	ENSMUSG00000019779	Frk	BSK|BSK/IYK|C85044|GTK|RAK	fyn-related kinase	protein-coding
unique_peak2-39022-3-6--1.22133801201688-1.08602067057793	chr8	61225239	61225632	+	0	NA	intron (NM_175032, intron 1 of 11)	intron (NM_175032, intron 1 of 11)	-45842	NM_001177534	100271928	Mm.484123	NM_001177534		Gm15881	OTTMUSG00000027193	predicted gene 15881	protein-coding
common_peak1-18489-35-47--0.153592242258652-0.339646668784	chr8	85026603	85027949	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	-100791	NM_008357	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
unique_peak2-38512-2-5--1.50241675698448-1.08602067057793	chr7	44896099	44896424	+	0	NA	Intergenic	Intergenic	1623643	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak1-4800-13-10-0.319040412000471-0.446472590016315	chr3	133600465	133601179	+	0	NA	Intergenic	(TC)n|Simple_repeat|Simple_repeat	-298637	NM_001004367	319478	Mm.224814	NM_001004367	ENSMUSG00000044365	Cxxc4	9330210J02Rik|C030003J12Rik|Idax	CXXC finger 4	protein-coding
unique_peak1-5330-8-0-3.00522241794757-2.70926996097583	chr5	81369787	81370257	+	0	NA	Intergenic	L1Md_F3|LINE|L1	-80596	NM_198702	319387	Mm.273631	NM_198702	ENSMUSG00000037605	Lphn3	5430402I23Rik|CIRL-3|D130075K09Rik|Gm1379|LEC3|mKIAA0768	latrophilin 3	protein-coding
common_peak2-30404-25-13-1.0544949832875-1.65862513589797	chr7	35080882	35081362	+	0	NA	Intergenic	Intergenic	-10494	NM_172741	233103	Mm.491097	NM_172741	ENSMUSG00000066571	4931406P16Rik	AA553327|mKIAA0355	RIKEN cDNA 4931406P16 gene	protein-coding
unique_peak1-6573-10-0-3.35641534500877-3.31132995230379	chr7	139235163	139235688	+	0	NA	3' UTR (NM_018867, exon 14 of 14)	3' UTR (NM_018867, exon 14 of 14)	77282	NM_173410	233919	Mm.208740	NM_173410		Gpr26	9630036A11Rik|A730021D22	G protein-coupled receptor 26	protein-coding
common_peak2-21299-70-84-0.210575980237697-0.535112040287526	chr11	72606906	72608529	+	0	NA	intron (NM_001024926, intron 1 of 3)	intron (NM_001024926, intron 1 of 3)	1624	NM_001024926	192986	Mm.194755	NM_001024926	ENSMUSG00000057778	Cyb5d2	9330151E16Rik|Gm2	cytochrome b5 domain containing 2	protein-coding
common_peak2-30586-9-8-0.0196884049619079-1.03275496310833	chr7	80535208	80535700	+	0	NA	intron (NM_177740, intron 1 of 3)	intron (NM_177740, intron 1 of 3)	-14794	NR_040324	319783	Mm.349813	NR_040324	ENSMUSG00000097756	A730056A06Rik	C76391	RIKEN cDNA A730056A06 gene	ncRNA
common_peak1-8453-63-59-0.531421995462071-1.47433608278374	chr10	79853631	79855463	+	0	NA	TTS (NM_013595)	TTS (NM_013595)	-4151	NM_198615	237400	Mm.268389	NM_198615	ENSMUSG00000048696	Mex3d	BC059858|Rkhd1	mex3 homolog D (C. elegans)	protein-coding
common_peak2-26462-148-178-0.433438350377863-2.42700518566538	chr2	75657665	75660329	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-11237	NM_172666	228061	Mm.31227	NM_172666	ENSMUSG00000042410	Agps	5832437L22|9930035G10Rik|AW123847|Adaps|Adas|Adhaps|Adps|Aldhpsy|bs2	alkylglycerone phosphate synthase	protein-coding
unique_peak1-7241-8-0-3.00522241794757-2.70926996097583	chr9	77161847	77162277	+	0	NA	intron (NM_027150, intron 1 of 7)	L1Md_F2|LINE|L1	33615	NM_027150	69642	Mm.35008	NM_027150	ENSMUSG00000032355	Mlip	2310046A06Rik|AI931782|CIP	muscular LMNA-interacting protein	protein-coding
unique_peak2-34598-5-15--1.70438033600585-1.4372489031793	chr14	70333740	70334440	+	0	NA	intron (NM_028560, intron 3 of 6)	intron (NM_028560, intron 3 of 6)	93876	NM_028526	73523	Mm.23509	NM_028526	ENSMUSG00000022085	Pebp4	PEBP-4	phosphatidylethanolamine binding protein 4	protein-coding
unique_peak1-5753-15-6-1.20480982849805-1.32521814697968	chr6	50379593	50380295	+	0	NA	intron (NM_001163645, intron 1 of 21)	Lx9|LINE|L1	26225	NM_001163645	71720	Mm.44153	NM_027881	ENSMUSG00000029822	Osbpl3	1200014M06Rik|6720421I08Rik|A530055M08|ORP3|OSBP3	oxysterol binding protein-like 3	protein-coding
common_peak2-31060-343-445-0.580651188719282-9.98999786526831	chr8	20423319	20425536	+	0	NA	Intergenic	Intergenic	-404035	NR_028428	381598	Mm.359054	NM_001024708	ENSMUSG00000071793	2610005L07Rik	2810038F24Rik|6720476A01Rik	cadherin 11 pseudogene	pseudo
unique_peak2-35276-0-6--3.64748585253182-1.56314192529759	chr17	5099241	5099675	+	0	NA	intron (NM_001085355, intron 3 of 19)	intron (NM_001085355, intron 3 of 19)	104384	NM_001085355	239985	Mm.133401	NM_001085355	ENSMUSG00000069729	Arid1b	8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235	AT rich interactive domain 1B (SWI-like)	protein-coding
unique_peak2-36906-3-5--0.998945590680433-0.96108193396963	chr3	96679210	96679556	+	0	NA	intron (NM_026229, intron 11 of 13)	intron (NM_026229, intron 11 of 13)	29838	NM_026229	67549	Mm.46722	NM_026229		Gpr89	4933412D19Rik|Gpr89a|SH120	G protein-coupled receptor 89	protein-coding
common_peak1-15884-15-11-0.4272022498345-0.503257505534083	chr5	8848820	8849335	+	0	NA	intron (NM_011075, intron 22 of 27)	intron (NM_011075, intron 22 of 27)	-44644	NM_008830	18670	Mm.297825	NM_008830	ENSMUSG00000042476	Abcb4	Mdr2|Pgy-2|Pgy2|mdr-2	ATP-binding cassette, sub-family B (MDR/TAP), member 4	protein-coding
unique_peak1-5076-11-3-1.50869358425161-1.95434855131066	chr4	141133090	141133532	+	0	NA	3' UTR (NM_001163256, exon 9 of 9)	3' UTR (NM_001163256, exon 9 of 9)	22528	NM_001163256	74202	Mm.490327	NM_133754	ENSMUSG00000006219	Fblim1	2410043F08Rik|Cal|Fblp1|Gt10|migfilin|migfilin(s)	filamin binding LIM protein 1	protein-coding
common_peak1-14910-10-9-0.0344872501214071-1.05503135781948	chr3	97297090	97297582	+	0	NA	Intergenic	PB1D10|SINE|Alu	-82234	NM_146275	258272	Mm.377406	NM_146275	ENSMUSG00000051392	Olfr1402	MOR217-1	olfactory receptor 1402	protein-coding
common_peak2-26998-11-22--1.0148683718054-1.11267835143409	chr2	169633020	169634081	+	0	NA	intron (NM_080455, intron 1 of 1)	(TG)n|Simple_repeat|Simple_repeat	174404	NM_080455	228911	Mm.315789	NM_080455	ENSMUSG00000047907	Tshz2	2900073F20Rik|B830045G17|Mtsh2|Sdccag33l|Tsh2|Zfp218|mKIAA4248|teashirt2	teashirt zinc finger family member 2	protein-coding
unique_peak1-2285-7-2-1.21412832957703-1.45399745587252	chr15	79774623	79775072	+	0	NA	Intergenic	Intergenic	-11771	NM_144811	52609	Mm.323442	NM_144811	ENSMUSG00000053411	Cbx7	1600014J01Rik|AI851678|D15Ertd417e	chromobox 7	protein-coding
common_peak2-28469-8-7-0.00522241794757061-1.00793137938329	chr4	154011186	154011632	+	0	NA	promoter-TSS (NM_001177995)	promoter-TSS (NM_001177995)	-427	NM_027504	70673	Mm.257785	NM_027504	ENSMUSG00000039410	Prdm16	5730557K01Rik|csp1|mel1	PR domain containing 16	protein-coding
common_peak1-10788-24-7-1.79320990276772-3.23080944932562	chr14	75863273	75864164	+	0	NA	intron (NM_001128093, intron 1 of 1)	intron (NM_001128093, intron 1 of 1)	7929	NM_001128093	380918	Mm.484360	NM_001128093	ENSMUSG00000091722	Siah3	Gm912	seven in absentia homolog 3 (Drosophila)	protein-coding
common_peak1-15132-12-24--0.995080204687086-1.0220094258199	chr3	142439176	142439634	+	0	NA	intron (NM_145546, intron 2 of 6)	intron (NM_145546, intron 2 of 6)	11194	NM_145546	229906	Mm.271756	NM_145546	ENSMUSG00000028271	Gtf2b	-	general transcription factor IIB	protein-coding
unique_peak2-36166-8-6-0.197867495889966-1.03789460276074	chr2	27475084	27475460	+	0	NA	Intergenic	Intergenic	-57449	NM_011305	20181	Mm.24624	NM_011305	ENSMUSG00000015846	Rxra	9530071D11Rik|Nr2b1|RXRalpha1	retinoid X receptor alpha	protein-coding
common_peak2-25336-113-183--0.0748922103603036-0.339852845632379	chr18	76240708	76242736	+	0	NA	intron (NM_145356, intron 3 of 4)	intron (NM_145356, intron 3 of 4)	16403	NR_045365	73009	Mm.443541	NR_045365		2900057B20Rik	-	RIKEN cDNA 2900057B20 gene	ncRNA
common_peak2-29784-12-11-0.0638134843664826-0.337263207250336	chr6	89344464	89345119	+	0	NA	intron (NM_001167736, intron 5 of 6)	intron (NM_001167736, intron 5 of 6)	-32184	NM_008881	18844	Mm.3789	NM_008881	ENSMUSG00000030084	Plxna1	2600013D04Rik|NOV|PlexA1|Plxn1|mKIAA4053	plexin A1	protein-coding
common_peak2-32381-19-17-0.232762325219374-0.392630012299441	chrX	109142656	109143320	+	0	NA	Intergenic	Lx5|LINE|L1	-64141	NM_031382	83556	Mm.190608	NM_031382	ENSMUSG00000034555	Tex16	OTTMUSG00000018437	testis expressed gene 16	protein-coding
common_peak2-19791-53-75--0.106954501027657-0.324829931509269	chr1	86471596	86473277	+	0	NA	Intergenic	Intergenic	1022949	NM_030194	109032	Mm.335802	NM_030194	ENSMUSG00000070034	Sp110	5031415C07Rik|52kDa|5830484A20Rik|ENSMUSG00000075603|Ifi75|Ipr1	Sp110 nuclear body protein	protein-coding
common_peak2-21430-58-80--0.0439000679941275-0.302395710585543	chr11	86357172	86358523	+	0	NA	promoter-TSS (NM_001199046)	promoter-TSS (NM_001199046)	462	NM_028259	72508	Mm.394280	NM_028259	ENSMUSG00000020516	Rps6kb1	2610318I15Rik|4732464A07Rik|70kDa|AA959758|AI256796|AI314060|S6K1|p70/85s6k|p70s6k	ribosomal protein S6 kinase, polypeptide 1	protein-coding
common_peak1-13580-7-7--0.200909169701811-0.97990265578305	chr2	13523471	13523962	+	0	NA	Intergenic	RMER15-int|LTR|ERVL	27778	NM_011701	22352	Mm.268000	NM_011701	ENSMUSG00000026728	Vim	-	vimentin	protein-coding
common_peak2-23519-57-64-0.243665227050474-0.561668673126632	chr15	76903898	76905192	+	0	NA	Intergenic	Intergenic	-10283	NR_108037	74303	Mm.444304	NR_108037	ENSMUSG00000097267	1700109K24Rik	4933425G21Rik	RIKEN cDNA 1700109K24 gene	ncRNA
unique_peak2-34495-2-6--1.72480917832092-1.26211192963361	chr14	46388753	46389191	+	0	NA	Intergenic	Intergenic	-111154	NM_001042719	114874	Mm.121918	NM_176845	ENSMUSG00000037697	Ddhd1	PA-PLA1	DDHD domain containing 1	protein-coding
unique_peak1-3776-18-4-1.99099105634099-2.82951996911245	chr19	55701968	55702584	+	0	NA	TTS (NM_001293685)	TTS (NM_001293685)	74418	NR_045318	77594	Mm.329924	NR_045318	ENSMUSG00000097632	4930552P12Rik	-	RIKEN cDNA 4930552P12 gene	ncRNA
common_peak1-13900-24-23-0.208247402046561-0.407645899519042	chr2	78412216	78413261	+	0	NA	Intergenic	Intergenic	-296466	NM_009454	22193	Mm.1485	NM_009454		Ube2e3	Ubce4|ubcM2	ubiquitin-conjugating enzyme E2E 3	protein-coding
common_peak1-17883-26-19-0.6059709972711-0.841847921495509	chr7	118309468	118310548	+	0	NA	Intergenic	Intergenic	-43819	NR_015573	75479	Mm.381620	NR_015573		1700012D14Rik	-	RIKEN cDNA 1700012D14 gene	ncRNA
unique_peak2-35597-10-24--1.28744084476596-1.59083646988122	chr17	78915918	78916838	+	0	NA	intron (NM_028813, intron 1 of 13)	B4A|SINE|B4	8975	NM_028813	74199	Mm.292983	NM_028813	ENSMUSG00000024076	Vit	1700052E02Rik|1700110E08Rik|2810429K11Rik	vitrin	protein-coding
unique_peak1-4425-10-2-1.77145284428761-2.09384600808989	chr2	168005503	168006039	+	0	NA	TTS (NM_009628)	TTS (NM_009628)	-25758	NR_040327	77017	Mm.407822	NR_040327	ENSMUSG00000087648	E130018N17Rik	-	RIKEN cDNA E130018N17 gene	ncRNA
common_peak2-29636-37-65--0.518401047872635-1.01073730818493	chr6	57702478	57704104	+	0	NA	3' UTR (NM_146168, exon 5 of 5)	3' UTR (NM_146168, exon 5 of 5)	50842	NM_133737	71835	Mm.274904	NM_133737		Lancl2	1700003F10Rik	LanC (bacterial lantibiotic synthetase component C)-like 2	protein-coding
common_peak2-31851-16-11-0.533301141546906-0.58239619684445	chr9	48406429	48407100	+	0	NA	intron (NM_010924, intron 2 of 2)	intron (NM_010924, intron 2 of 2)	6418	NM_010924	18113	Mm.8362	NM_010924	ENSMUSG00000032271	Nnmt	-	nicotinamide N-methyltransferase	protein-coding
common_peak2-31689-30-20-0.777357986713112-1.30767018140166	chr8	128654560	128655310	+	0	NA	Intergenic	Intergenic	135933	NM_008430	16525	Mm.10800	NM_008430	ENSMUSG00000033998	Kcnk1	AI788889|TWIK-1	potassium channel, subfamily K, member 1	protein-coding
unique_peak1-4271-12-1-2.64877598508764-3.36932189928148	chr2	132921110	132921876	+	0	NA	Intergenic	Intergenic	-149721	NM_198029	241639	Mm.209784	NM_198029	ENSMUSG00000027356	Fermt1	5830467P10Rik|Kindlin-1	fermitin family homolog 1 (Drosophila)	protein-coding
common_peak2-26560-18-11-0.727956650507195-0.876666802405043	chr2	102158645	102159187	+	0	NA	intron (NM_020267, intron 4 of 4)	intron (NM_020267, intron 4 of 4)	82141	NM_020267	80985	Mm.315002	NM_020267	ENSMUSG00000027189	Trim44	Dipb|Mc7	tripartite motif-containing 44	protein-coding
unique_peak1-3125-8-0-3.00522241794757-2.70926996097583	chr18	35572256	35572739	+	0	NA	intron (NM_030749, intron 3 of 9)	intron (NM_030749, intron 3 of 9)	86082	NM_030749	81500	Mm.291482	NM_030749	ENSMUSG00000024357	Sil1	1810057E01Rik|AI042831|wz	endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)	protein-coding
common_peak2-25392-32-22-0.755530063162647-1.34355844763204	chr19	3685742	3686717	+	0	NA	intron (NM_008513, intron 1 of 22)	CpG	335	NM_008513	16973	Mm.274581	NM_008513	ENSMUSG00000024913	Lrp5	BMND1|HBM|LR3|LRP7|OPPG|mKIAA4142	low density lipoprotein receptor-related protein 5	protein-coding
unique_peak1-6358-9-2-1.60465090568306-1.87199725847353	chr7	66233621	66234116	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-250252	NM_173010	22215	Mm.9002	NM_011668	ENSMUSG00000025326	Ube3a	4732496B02|5830462N02Rik|A130086L21Rik|Hpve6a|mKIAA4216	ubiquitin protein ligase E3A	protein-coding
common_peak1-8306-18-35--0.857005850213961-1.20071330053878	chr10	39732124	39732763	+	0	NA	intron (NM_144821, intron 1 of 3)	intron (NM_144821, intron 1 of 3)	12631	NM_144821	215929	Mm.55513	NM_144821	ENSMUSG00000038522	AI317395	AI482555|Naglt1a	expressed sequence AI317395	protein-coding
common_peak1-9003-27-50--0.680879391076259-1.16605326768361	chr11	60219887	60220744	+	0	NA	intron (NM_145427, intron 4 of 7)	intron (NM_145427, intron 4 of 7)	10286	NM_145427	246782	Mm.41651	NM_145427	ENSMUSG00000042709	Atpaf2	ATP12|ATP12p	ATP synthase mitochondrial F1 complex assembly factor 2	protein-coding
unique_peak2-37053-0-4--3.16205902536157-1.10720996964787	chr3	137991540	137991853	+	0	NA	intron (NM_026945, intron 7 of 8)	intron (NM_026945, intron 7 of 8)	15446	NM_026945	69117	Mm.46265	NM_026945	ENSMUSG00000053054	Adh6a	1810009C16Rik|Adh5a	alcohol dehydrogenase 6A (class V)	protein-coding
common_peak1-18930-27-30-0.0373496405083609-0.315041925765932	chr9	45496074	45497016	+	0	NA	intron (NM_001081270, intron 11 of 32)	intron (NM_001081270, intron 11 of 32)	140176	NM_001081373	214552	Mm.260103	NM_172531	ENSMUSG00000043987	Cep164	AI450905|BC027092|D030051D21|mKIAA1052	centrosomal protein 164	protein-coding
unique_peak1-4600-13-2-2.19350952991661-3.03832868024006	chr3	60603240	60603939	+	0	NA	Intergenic	Intergenic	-203118	NM_008772	18441	Mm.281452	NM_008772	ENSMUSG00000027765	P2ry1	P2Y1	purinergic receptor P2Y, G-protein coupled 1	protein-coding
common_peak2-29035-25-36--0.347603460283844-0.465043498729215	chr5	114371850	114373460	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-13940	NM_011779	23790	Mm.260158	NM_011779	ENSMUSG00000004530	Coro1c	AL022675|AW455561|AW548837	coronin, actin binding protein 1C	protein-coding
common_peak1-11761-18-19--0.00900894365901106-0.306598483909153	chr16	38522717	38523223	+	0	NA	promoter-TSS (NM_024273)	promoter-TSS (NM_024273)	-223	NM_024273	76916	Mm.132231	NM_024273		Timmdc1	2810021C21Rik|4930455C21Rik|AV135763	translocase of inner mitochondrial membrane domain containing 1	protein-coding
unique_peak1-1754-38-6-2.76409773724093-8.37587362740872	chr13	108292563	108293938	+	0	NA	Intergenic	(GGGA)n|Simple_repeat|Simple_repeat	33348	NR_045084	105120	Mm.417700	NR_045083		AI197445	-	expressed sequence AI197445	ncRNA
common_peak1-19508-17-24--0.425559851569687-0.427564438475253	chrX	166479146	166480205	+	0	NA	Intergenic	Intergenic	-62826	NR_029457	654820	Mm.34441	NM_001039559	ENSMUSG00000072844	G530011O06Rik	-	RIKEN cDNA G530011O06 gene	ncRNA
unique_peak2-32698-8-12--0.695217300193522-0.475924844171029	chr1	151571408	151572090	+	0	NA	Intergenic	Intergenic	236665	NM_008869	18783	Mm.4186	NM_008869	ENSMUSG00000056220	Pla2g4a	Pla2g4|cPLA2|cPLA2alpha	phospholipase A2, group IVA (cytosolic, calcium-dependent)	protein-coding
unique_peak1-4424-6-2-0.980435609659146-1.26211192963361	chr2	167942761	167943220	+	0	NA	Intergenic	CpG	36486	NM_021409	58220	Mm.292834	NM_021409	ENSMUSG00000044641	Pard6b	AV025615|Par6b	par-6 family cell polarity regulator beta	protein-coding
unique_peak1-1934-7-1-1.79909083029819-1.80617997398389	chr14	76745026	76745511	+	0	NA	Intergenic	Intergenic	-70360	NM_207652	21807	Mm.153272	NM_009366	ENSMUSG00000022010	Tsc22d1	AA589566|AW105905|Egr5|TSC-22|Tgfb1i4|Tsc|Tsc22	TSC22 domain family, member 1	protein-coding
unique_peak2-37264-6-36--2.64405525524865-5.46361714676356	chr4	108153700	108154555	+	0	NA	intron (NM_175472, intron 3 of 30)	L1Md_F2|LINE|L1	22096	NM_175472	230594	Mm.25181	NM_175472	ENSMUSG00000034610	Zcchc11	6030404K05Rik|9230115F04Rik|PPAPD3|mKIAA0191	zinc finger, CCHC domain containing 11	protein-coding
unique_peak1-841-15-1-3.01216475055566-4.18809100057339	chr11	11897898	11898563	+	0	NA	intron (NM_010345, intron 1 of 16)	intron (NM_010345, intron 1 of 16)	29744	NM_001177629	14783	Mm.273117	NM_010345	ENSMUSG00000020176	Grb10	5730571D09Rik|AI325020|Meg1|mKIAA0207	growth factor receptor bound protein 10	protein-coding
common_peak2-29555-11-10-0.0492619656143161-0.31137425193576	chr6	42299346	42299787	+	0	NA	promoter-TSS (NM_011777)	promoter-TSS (NM_011777)	-261	NM_011777	22793	Mm.282303	NM_011777	ENSMUSG00000029860	Zyx	9530098H06Rik|R75157	zyxin	protein-coding
common_peak1-12164-14-13-0.0918612383000403-0.332077462497413	chr17	29428119	29428728	+	0	NA	intron (NM_030561, intron 4 of 8)	intron (NM_030561, intron 4 of 8)	22690	NM_030561	80748	Mm.290116	NM_030561	ENSMUSG00000052712	BC004004	2400006G15Rik	cDNA sequence BC004004	protein-coding
unique_peak1-2657-7-0-2.79909083029819-2.40823996531185	chr16	52319912	52320396	+	0	NA	intron (NM_009655, intron 1 of 15)	Lx9|LINE|L1	132956	NM_009655	11658	Mm.288282	NM_009655	ENSMUSG00000022636	Alcam	AI853494|BEN|CD166|DM-GRASP|MuSC|SC1	activated leukocyte cell adhesion molecule	protein-coding
common_peak1-12750-7-6--0.00826409175941478-0.97990265578305	chr18	57836780	57837272	+	0	NA	intron (NM_029290, intron 6 of 6)	RMER5|LTR|ERV1	-38787	NR_045360	70157	Mm.490532	NR_045360		2210409D07Rik	-	RIKEN cDNA 2210409D07 gene	ncRNA
common_peak2-31376-27-52--0.736374503667963-1.34506277748691	chr8	85071466	85072600	+	0	NA	Intergenic	L1MB1|LINE|L1	-145548	NM_008357	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak2-29244-6-7--0.434601889619698-0.97990265578305	chr5	139457588	139457909	+	0	NA	intron (NM_008808, intron 4 of 5)	intron (NM_008808, intron 4 of 5)	13159	NM_008808	18590	Mm.2675	NM_008808	ENSMUSG00000025856	Pdgfa	-	platelet derived growth factor, alpha	protein-coding
unique_peak2-37624-10-25--1.34402437313232-1.74319850844462	chr5	66398085	66398913	+	0	NA	Intergenic	Intergenic	-2975	NR_027961	231253	Mm.436542	NM_177679	ENSMUSG00000054598	9130230L23Rik	-	RIKEN cDNA 9130230L23 gene	ncRNA
common_peak2-23140-82-74-0.664444453809854-2.60049418611543	chr14	105176453	105177906	+	0	NA	intron (NR_015593, intron 2 of 5)	intron (NR_015593, intron 2 of 5)	138815	NR_015593	320249	Mm.320725	NR_015593		D130009I18Rik	-	RIKEN cDNA D130009I18 gene	ncRNA
unique_peak2-33988-5-11--1.28934283672701-1.477227296591	chr12	85973828	85974373	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-7869	NM_001168589	432677	Mm.311913	NM_001033776	ENSMUSG00000071235	Vrtn	7420416P09Rik	vertebrae development associated	protein-coding
common_peak1-10349-123-201--0.0623882327449881-0.336305068014969	chr13	80885185	80887140	+	0	NA	Intergenic	Intergenic	-136521	NM_001042591	105171	Mm.423137	NM_001042591	ENSMUSG00000074794	Arrdc3	AI450344|mKIAA1376	arrestin domain containing 3	protein-coding
common_peak2-19841-7-11--0.785871670422967-1.21681515183528	chr1	91024350	91024789	+	0	NA	intron (NM_133816, intron 2 of 5)	B1_Mus1|SINE|Alu	57532	NM_133816	98402	Mm.170983	NM_133816		Sh3bp4	AI594717|AW227605|BOG25	SH3-domain binding protein 4	protein-coding
unique_peak2-35723-3-12--2.11442280810037-2.15846853396659	chr18	34887062	34887455	+	0	NA	Intergenic	RLTR13D3|LTR|ERVK	-7217	NM_010280	14587	Mm.16520	NM_010280	ENSMUSG00000024366	Gfra3	GFRalpha3|Y15110	glial cell line derived neurotrophic factor family receptor alpha 3	protein-coding
common_peak1-15825-11-28--1.34928741087596-1.9654245668484	chr5	111247100	111247682	+	0	NA	Intergenic	RMER19A|LTR|ERVK	-8291	NM_009469	22241	Mm.271898	NM_009469	ENSMUSG00000029512	Ulk1	AU041434|Unc51.1|mKIAA0722	unc-51 like kinase 1	protein-coding
common_peak2-21582-25-20-0.469532482566345-0.662033714151238	chr11	97988294	97988967	+	0	NA	intron (NM_028149, intron 2 of 14)	intron (NM_028149, intron 2 of 14)	22300	NM_028149	72194	Mm.218350	NM_028149	ENSMUSG00000020883	Fbxl20	2610511F20Rik|4632423N09Rik|AI849362|AL117906|C86145|Fbl2|Scr|mKIAA4147	F-box and leucine-rich repeat protein 20	protein-coding
common_peak2-24536-11-19--0.813234510635749-0.769930178837768	chr17	27546840	27547511	+	0	NA	Intergenic	RSINE1|SINE|B4	52133	NR_106077	102466228		NR_106077		Mir7218	mmu-mir-7218	microRNA mir-7218	ncRNA
common_peak2-25217-12-9-0.326847890200276-0.459837087125828	chr18	61212876	61213409	+	0	NA	intron (NM_001146268, intron 1 of 22)	intron (NM_001146268, intron 1 of 22)	8338	NM_008809	18596	Mm.4146	NM_008809	ENSMUSG00000024620	Pdgfrb	AI528809|CD140b|PDGFR-1|Pdgfr	platelet derived growth factor receptor, beta polypeptide	protein-coding
unique_peak1-4218-20-5-1.90311228387004-2.81016724606745	chr2	120566649	120567518	+	0	NA	intron (NM_001024856, intron 15 of 15)	intron (NM_001024856, intron 15 of 15)	-9830	NM_026891	68968	Mm.2289	NM_026891	ENSMUSG00000027284	Cdan1	1500015A01Rik|AI448026|AW492297|CDA-I|CDA1|CDAI	congenital dyserythropoietic anemia, type I (human)	protein-coding
common_peak2-27045-17-5-1.63333383748388-2.19184853030482	chr2	180233503	180233914	+	0	NA	promoter-TSS (NM_018766)	promoter-TSS (NM_018766)	-973	NM_018766	18216	Mm.301712	NM_018766	ENSMUSG00000027568	Ntsr1	NT-1R|NTR-1|NTR1	neurotensin receptor 1	protein-coding
unique_peak1-590-10-4-1.03448725012141-1.5150158574804	chr10	12698122	12698657	+	0	NA	Intergenic	Intergenic	-14324	NM_001163591	74732	Mm.248648	NM_029075	ENSMUSG00000039232	Stx11	5830405C08Rik	syntaxin 11	protein-coding
common_peak1-11866-8-10--0.454209200689727-1.078512453669	chr16	92687566	92688088	+	0	NA	intron (NM_001111022, intron 4 of 6)	intron (NM_001111022, intron 4 of 6)	9747	NM_001111023	12394	Mm.4081	NM_009821	ENSMUSG00000022952	Runx1	AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b	runt related transcription factor 1	protein-coding
common_peak2-23035-42-80--0.59752067501744-1.40346842354903	chr14	67071750	67072527	+	0	NA	Intergenic	Intergenic	108926	NM_019675	56471	Mm.35474	NM_019675	ENSMUSG00000022044	Stmn4	Lagl|R75359|RB3	stathmin-like 4	protein-coding
common_peak2-29328-11-15--0.491306415748387-0.435191258261915	chr5	146963098	146963849	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	33407	NM_001008547	69282	Mm.373573	NM_001008547	ENSMUSG00000095040	1700001J03Rik	-	RIKEN cDNA 1700001J03 gene	protein-coding
unique_peak2-36474-2-6--1.72480917832092-1.26211192963361	chr2	148035472	148035879	+	0	NA	Intergenic	Intergenic	-162970	NM_010446	15376	Mm.938	NM_010446	ENSMUSG00000037025	Foxa2	HNF3-beta|HNF3beta|Hnf-3b|Hnf3b|Tcf-3b|Tcf3b	forkhead box A2	protein-coding
unique_peak2-35737-1-5--2.2120195109379-1.32905871926422	chr18	36373993	36374347	+	0	NA	Intergenic	Intergenic	-17356	NM_001167891	100042150	Mm.380390	NM_001167891	ENSMUSG00000060275	Nrg2	Don1|NTAK	neuregulin 2	protein-coding
unique_peak2-33504-7-9--0.522837264589173-1.05908390183068	chr11	73320217	73320644	+	0	NA	Intergenic	Intergenic	10269	NM_146443	258435	Mm.377500	NM_146443	ENSMUSG00000095312	Olfr382	MOR135-14	olfactory receptor 382	protein-coding
unique_peak2-37098-3-7--1.41398308995928-1.23214870625617	chr3	154836941	154837308	+	0	NA	intron (NM_028938, intron 6 of 7)	L1_Mur2|LINE|L1	80726	NM_028938	74435	Mm.195711	NM_028938	ENSMUSG00000028182	Lrriq3	4930438B07Rik|4930511J15Rik|4933403H06Rik|BB020367|Lrrc44	leucine-rich repeats and IQ motif containing 3	protein-coding
common_peak1-11553-35-17-1.26144525702019-2.83052996583711	chr16	10979036	10980499	+	0	NA	intron (NM_019980, intron 1 of 3)	MLT-int|LTR|MaLR	13447	NM_019980	56722	Mm.294753	NM_019980	ENSMUSG00000022500	Litaf	3222402J11Rik|C85531|N4WBP3|TBX1	LPS-induced TN factor	protein-coding
common_peak1-15916-12-25--1.05166373305345-1.1381569562463	chr5	23850520	23851060	+	0	NA	intron (NM_013569, intron 2 of 14)	intron (NM_013569, intron 2 of 14)	6632	NM_013569	16511	Mm.6539	NM_013569	ENSMUSG00000038319	Kcnh2	AI326795|ERG1|LQT|Lqt2|M-erg|Merg1|merg1a|merg1b	potassium voltage-gated channel, subfamily H (eag-related), member 2	protein-coding
unique_peak2-33146-1-9--2.94898510510411-2.31132995230379	chr10	85739200	85739666	+	0	NA	intron (NM_013722, intron 6 of 13)	intron (NM_013722, intron 6 of 13)	-23724	NM_011595	21859	Mm.4871	NM_011595	ENSMUSG00000020044	Timp3	Timp-3	tissue inhibitor of metalloproteinase 3	protein-coding
common_peak1-16614-23-27--0.0855874175485232-0.30512735654709	chr5	151368791	151369837	+	0	NA	intron (NM_001081001, intron 24 of 26)	intron (NM_001081001, intron 24 of 26)	27786	NM_133898	100637	Mm.279932	NM_133898	ENSMUSG00000041132	N4bp2l1	2410024N18Rik|AI428195|B230342M21Rik	NEDD4 binding protein 2-like 1	protein-coding
unique_peak2-35086-6-8--0.60452689106201-1.03789460276074	chr16	17753262	17753810	+	0	NA	Intergenic	Intergenic	-6178	NM_145479	224023	Mm.282807	NM_145479	ENSMUSG00000022750	Klhl22	2610318I18Rik|Kelchl	kelch-like 22	protein-coding
unique_peak1-4204-16-4-1.7963355473807-2.18192634393779	chr2	118663165	118663992	+	0	NA	Intergenic	L1_Mus2|LINE|L1	23839	NM_026412	51944	Mm.252695	NM_026412		Knstrn	1700025D04Rik|C15orf23|D2Ertd750e|SKAP|Traf4af1	kinetochore-localized astrin/SPAG5 binding	protein-coding
unique_peak2-36006-9-27--1.61774151565338-2.34622402919155	chr19	38375680	38376439	+	0	NA	intron (NM_020278, intron 7 of 7)	intron (NM_020278, intron 7 of 7)	36787	NM_020278	56839	Mm.298251	NM_020278	ENSMUSG00000067242	Lgi1	BB130740	leucine-rich repeat LGI family, member 1	protein-coding
common_peak2-21209-22-23-0.0623216043662485-0.319130838712456	chr11	61637018	61638178	+	0	NA	intron (NM_013881, intron 12 of 26)	intron (NM_013881, intron 12 of 26)	30996	NM_013881	29869	Mm.162025	NM_013881	ENSMUSG00000004798	Ulk2	A830085I22Rik|AU015340|Unc51.2|mKIAA0623	unc-51 like kinase 2	protein-coding
unique_peak1-5028-7-0-2.79909083029819-2.40823996531185	chr4	130916683	130917188	+	0	NA	Intergenic	Intergenic	416635	NM_010769	17180	Mm.271796	NM_010769	ENSMUSG00000040533	Matn1	CMP|Crtm|Mat1|matrilin-1	matrilin 1, cartilage matrix protein	protein-coding
common_peak1-17304-38-40-0.213900654680447-0.459173512026158	chr6	137648205	137649279	+	0	NA	Intergenic	Intergenic	-34861	NM_011499	20901	Mm.22584	NM_011499	ENSMUSG00000030224	Strap	AW557906|C78091|C79202|Unrip	serine/threonine kinase receptor associated protein	protein-coding
common_peak2-27598-37-65--0.518401047872635-1.01073730818493	chr3	102995525	102996375	+	0	NA	Intergenic	RMER6C|LTR|ERVK	20316	NM_026602	68183	Mm.104919	NM_026602	ENSMUSG00000005687	Bcas2	6430539P16Rik|AI132645|C76366|C80030	breast carcinoma amplified sequence 2	protein-coding
unique_peak2-34477-11-7-0.508693584251613-1.21681515183528	chr14	33336267	33336673	+	0	NA	intron (NM_001081221, intron 4 of 20)	intron (NM_001081221, intron 4 of 20)	9763	NM_001081221	319955	Mm.318310	NM_177043	ENSMUSG00000054051	Ercc6	4732403I04|C130058G22Rik|CSB	excision repair cross-complementing rodent repair deficiency, complementation group 6	protein-coding
common_peak1-19467-14-7-0.899216160357645-0.947446088118041	chrX	126688455	126689298	+	0	NA	intron (NM_172493, intron 22 of 26)	L1VL4|LINE|L1	404598	NM_172493	54004	Mm.10763	NM_017398	ENSMUSG00000034480	Diap2	Dia3|Diaph2|Drf2|E430022I22Rik	diaphanous homolog 2 (Drosophila)	protein-coding
common_peak1-12251-9-20--1.20270401637454-1.23014042908325	chr17	35980207	35980735	+	0	NA	intron (NM_001010833, intron 1 of 15)	intron (NM_001010833, intron 1 of 15)	2028	NM_001010833	240087	Mm.218511	NM_001010833	ENSMUSG00000061607	Mdc1	6820401C03|AA413496|Nfbd1|mKIAA0170	mediator of DNA damage checkpoint 1	protein-coding
common_peak2-19685-127-118-0.756568748020113-5.04485512087423	chr1	58652383	58653468	+	0	NA	TTS (NM_025597)	TTS (NM_025597)	9482	NM_025597	66495	Mm.2033	NM_025597		Ndufb3	2700033I16Rik|AI415450	NADH dehydrogenase (ubiquinone) 1 beta subcomplex 3	protein-coding
common_peak2-24339-19-23--0.18227517405947-0.320777457303847	chr17	4868468	4869358	+	0	NA	Intergenic	Intergenic	-126161	NM_001085355	239985	Mm.133401	NM_001085355	ENSMUSG00000069729	Arid1b	8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235	AT rich interactive domain 1B (SWI-like)	protein-coding
unique_peak1-5033-11-0-3.50869358425161-3.61235994796777	chr4	132747789	132748402	+	0	NA	exon (NM_153423, exon 7 of 9)	exon (NM_153423, exon 7 of 9)	-3475	NR_105984	102466215		NR_105984		Mir7017	mmu-mir-7017	microRNA mir-7017	ncRNA
unique_peak1-4891-12-3-1.64877598508764-2.36932189928148	chr4	43732240	43732743	+	0	NA	Intergenic	Intergenic	-7579	NM_027511	100039781	Mm.18796	NM_027511		Hrct1	3830408D24Rik	histidine rich carboxyl terminus 1	protein-coding
unique_peak2-33454-1-9--2.94898510510411-2.31132995230379	chr11	64497611	64498112	+	0	NA	Intergenic	Intergenic	-247685	NR_028445	654805	Mm.436132	NR_028445		F930015N05Rik	-	RIKEN cDNA F930015N05 gene	ncRNA
common_peak2-24883-13-17--0.391452970804544-0.364171515310935	chr17	83576937	83577632	+	0	NA	Intergenic	B3|SINE|B2	-37339	NM_134117	106522	Mm.311974	NM_134117	ENSMUSG00000024247	Pkdcc	AI115348|AW548124|Adtk1|ESTM17|MAd1|Sgk493|Vlk|X83346	protein kinase domain containing, cytoplasmic	protein-coding
common_peak2-28476-13-42--1.64779272406433-3.48244293670685	chr4	155222906	155223686	+	0	NA	intron (NM_010091, intron 1 of 14)	intron (NM_010091, intron 1 of 14)	1775	NM_010091	13542	Mm.3400	NM_010091	ENSMUSG00000029071	Dvl1	Dvl|mKIAA4029	dishevelled, dsh homolog 1 (Drosophila)	protein-coding
unique_peak2-32964-6-8--0.60452689106201-1.03789460276074	chr10	45000407	45000913	+	0	NA	Intergenic	L1Md_T|LINE|L1	-8451	NM_024286	78977	Mm.24748	NM_024286	ENSMUSG00000019848	Popdc3	AA682104|Pop3	popeye domain containing 3	protein-coding
common_peak1-10041-37-48--0.0887167726293896-0.31027100108714	chr13	16011709	16013010	+	0	NA	Intergenic	Intergenic	-93949	NM_008380	16323	Mm.8042	NM_008380	ENSMUSG00000041324	Inhba	-	inhibin beta-A	protein-coding
unique_peak1-5937-8-1-2.00522241794757-2.05605744720049	chr6	90514876	90515364	+	0	NA	intron (NM_027406, intron 7 of 22)	intron (NM_027406, intron 7 of 22)	14278	NM_027406	107747	Mm.30035	NM_027406	ENSMUSG00000030088	Aldh1l1	1810048F20Rik|FDH|Fthfd|Neut2	aldehyde dehydrogenase 1 family, member L1	protein-coding
common_peak1-17562-8-14--0.901668177660948-0.660903317613906	chr7	34168045	34168526	+	0	NA	Intergenic	Intergenic	10032	NM_001270543	545948	Mm.349644	NM_001270543		Scgb1b20	EG545948|Gm5895	secretoglobin, family 1B, member 20	protein-coding
unique_peak1-6527-10-1-2.35641534500877-2.57096726280955	chr7	121802388	121802908	+	0	NA	Intergenic	URR1B|DNA|MER1_type	-22777	NM_001033954	12310	Mm.4361	NM_007587	ENSMUSG00000030669	Calca	CA|CGRP-1|CGRP1|Calc|Calc1|Cgrp|Ct|Ctn	calcitonin/calcitonin-related polypeptide, alpha	protein-coding
common_peak2-27929-28-26-0.298071617657994-0.481798116163919	chr4	15265812	15266770	+	0	NA	Intergenic	B4A|SINE|B4	73324	NM_181401	100201	Mm.394111	NM_181401	ENSMUSG00000043252	Tmem64	9630015D15Rik|AI790744|AV300874	transmembrane protein 64	protein-coding
common_peak1-13862-24-10-1.33377828413042-2.22881803703862	chr2	68934652	68935556	+	0	NA	intron (NM_172856, intron 8 of 9)	intron (NM_172856, intron 8 of 9)	-38753	NM_181547	329416	Mm.90047	NM_181547	ENSMUSG00000034738	Nostrin	Daip2|mDaIP2	nitric oxide synthase trafficker	protein-coding
unique_peak2-38216-1-7--2.62705701021674-1.80617997398389	chr6	114968027	114968492	+	0	NA	intron (NM_026894, intron 4 of 7)	intron (NM_026894, intron 4 of 7)	19633	NM_026894	68971	Mm.24937	NM_026894	ENSMUSG00000030316	Tamm41	1500001M20Rik|TAM41	TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)	protein-coding
common_peak1-14982-8-6-0.197867495889966-1.03789460276074	chr3	107632209	107632581	+	0	NA	Intergenic	Intergenic	-47753	NM_133867	99662	Mm.108491	NM_133867	ENSMUSG00000040600	Eps8l3	AI504489|Eps8r3	EPS8-like 3	protein-coding
common_peak1-19044-23-53--1.03311999765439-2.34578757725673	chr9	65346054	65347116	+	0	NA	Intergenic	Intergenic	37841	NM_138584	27965	Mm.272475	NM_138584	ENSMUSG00000032388	Spg21	ACP33|BM-019|C78576|D9Wsu18e|GL010|MAST	spastic paraplegia 21 homolog (human)	protein-coding
common_peak1-13237-61-11-2.79778682902818-13.8626325536612	chr19	29238912	29240968	+	0	NA	Intergenic	RMER17C|LTR|ERVK	30171	NR_029778	724062		NR_029778		Mir101b	Mirn101b|mir-101b	microRNA 101b	ncRNA
unique_peak2-39518-4-8--1.19338551529556-1.21878474469819	chr9	64774432	64774889	+	0	NA	intron (NM_144813, intron 8 of 9)	intron (NM_144813, intron 8 of 9)	24754	NM_144813	214111	Mm.156124	NM_144813	ENSMUSG00000034452	Slc24a1	-	solute carrier family 24 (sodium/potassium/calcium exchanger), member 1	protein-coding
common_peak1-12585-9-9--0.132314688483142-1.03275496310833	chr18	16740734	16741247	+	0	NA	Intergenic	B3A|SINE|B2	226568	NM_007664	12558	Mm.257437	NM_007664	ENSMUSG00000024304	Cdh2	CDHN|N-cadherin|Ncad	cadherin 2	protein-coding
common_peak1-9962-12-23--0.936186515633517-0.912223620338476	chr12	112644785	112645450	+	0	NA	promoter-TSS (NM_001101503)	promoter-TSS (NM_001101503)	97	NM_001101503	380787	Mm.125602	NM_001101503	ENSMUSG00000087075	A230065H16Rik	Gm898|Lbh2	RIKEN cDNA A230065H16 gene	protein-coding
unique_peak1-718-14-8-0.729291158915332-0.771068449301682	chr10	93069038	93069782	+	0	NA	Intergenic	Intergenic	-17007	NM_027246	69878	Mm.259642	NM_027246	ENSMUSG00000020018	Snrpf	2010013O18Rik|SMF|sm-F|snRNP-F	small nuclear ribonucleoprotein polypeptide F	protein-coding
common_peak2-23892-21-42--0.856775489435862-1.3806499615138	chr16	3744116	3745078	+	0	NA	exon (NM_148924, exon 1 of 6)	exon (NM_148924, exon 1 of 6)	498	NM_148924	74120	Mm.29081	NM_148924	ENSMUSG00000022529	Zfp263	1200014J04Rik|AI326880|AU020888|NT2|mFPM315	zinc finger protein 263	protein-coding
common_peak2-29947-26-21-0.468467473521165-0.647723624534446	chr6	116644303	116645186	+	0	NA	3' UTR (NM_178768, exon 5 of 5)	3' UTR (NM_178768, exon 5 of 5)	-20890	NM_178045	213391	Mm.257931	NM_178045	ENSMUSG00000042129	Rassf4	3830411C14Rik|AD037|AI586137	Ras association (RalGDS/AF-6) domain family member 4	protein-coding
common_peak2-23245-13-7-0.778472030637769-0.817533494790411	chr15	10713751	10714175	+	0	NA	intron (NR_045063, intron 5 of 6)	L1Md_T|LINE|L1	-44843	NR_040357	100502601	Mm.399434	NR_040357		Gm19276	-	predicted gene, 19276	ncRNA
common_peak2-31451-23-13-0.914412582451476-1.26025077975594	chr8	104866855	104867739	+	0	NA	Intergenic	Intergenic	441714	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
common_peak2-27197-16-7-1.11826364226806-1.23399803405144	chr3	37976462	37976956	+	0	NA	Intergenic	Intergenic	130332	NR_040541	71342	Mm.410782	NR_040541		5430434I15Rik	-	RIKEN cDNA 5430434I15 gene	ncRNA
common_peak1-16143-23-12-1.02132778636799-1.44787515926925	chr5	74061319	74062473	+	0	NA	intron (NM_178387, intron 7 of 12)	intron (NM_178387, intron 7 of 12)	19277	NM_178387	73472	Mm.87067	NM_178387	ENSMUSG00000029155	Spata18	1700067I02Rik	spermatogenesis associated 18	protein-coding
common_peak1-10036-13-17--0.391452970804544-0.364171515310935	chr13	14522321	14522925	+	0	NA	intron (NM_001081348, intron 2 of 28)	intron (NM_001081348, intron 2 of 28)	92870	NM_001081348	94253	Mm.125298	NM_153130	ENSMUSG00000021301	Hecw1	9330116H24Rik|AV273951|E130207I19Rik|Nedl1	HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1	protein-coding
common_peak2-25465-20-22--0.03548717146582-0.301029995663994	chr19	4268520	4269354	+	0	NA	intron (NM_198113, intron 1 of 13)	intron (NM_198113, intron 1 of 13)	235	NM_198113	245857	Mm.248388	NM_198113	ENSMUSG00000034616	Ssh3	BC028922|SSH-3|mSSH-3L	slingshot homolog 3 (Drosophila)	protein-coding
unique_peak2-33634-3-7--1.41398308995928-1.23214870625617	chr11	98371416	98371835	+	0	NA	intron (NM_011771, intron 3 of 7)	intron (NM_011771, intron 3 of 7)	35720	NM_011771	22780	Mm.133367	NM_011771	ENSMUSG00000018168	Ikzf3	5830411O07Rik|Aiolos|Zfpn1a3|Znfn1a3	IKAROS family zinc finger 3	protein-coding
common_peak2-21253-15-39--1.30976334433171-2.45517123152778	chr11	69097237	69097942	+	0	NA	Intergenic	Lx3_Mus|LINE|L1	39786	NM_172560	216846	Mm.28774	NM_172560	ENSMUSG00000032782	Cntrob	9830165K03Rik|Lip8	centrobin, centrosomal BRCA2 interacting protein	protein-coding
common_peak2-24669-19-28--0.455293668465885-0.518921928796332	chr17	36836738	36837655	+	0	NA	Intergenic	Intergenic	-28054	NM_177636	224756	Mm.246583	NM_177636	ENSMUSG00000037334	H2-M1	H-2M1|H2-Qa-Mb1|Mb1	histocompatibility 2, M region locus 1	protein-coding
common_peak2-22846-13-7-0.778472030637769-0.817533494790411	chr14	21822602	21823034	+	0	NA	intron (NM_009502, intron 10 of 20)	intron (NM_009502, intron 10 of 20)	48846	NM_018829	55946	Mm.376269	NM_018829		Ap3m1	1200013D09Rik|C78982|R75378	adaptor-related protein complex 3, mu 1 subunit	protein-coding
unique_peak2-39062-3-11--1.99894559068043-1.95434855131066	chr8	71569557	71569836	+	0	NA	intron (NM_153054, intron 11 of 16)	intron (NM_153054, intron 11 of 16)	-42939	NM_007509	11966	Mm.249096	NM_007509	ENSMUSG00000006273	Atp6v1b2	AI194269|AI790362|Atp6b2|HO57|R74844	ATPase, H+ transporting, lysosomal V1 subunit B2	protein-coding
common_peak1-11401-22-15-0.647284105087405-0.849699271740893	chr15	98595226	98596152	+	0	NA	Intergenic	MTD|LTR|MaLR	-2140	NM_007478	11842	Mm.221298	NM_007478	ENSMUSG00000051853	Arf3	5430400P17Rik|AI854770	ADP-ribosylation factor 3	protein-coding
common_peak1-8761-19-31--0.597312673338314-0.721233599456203	chr11	5761626	5762625	+	0	NA	5' UTR (NM_009636, exon 1 of 21)	5' UTR (NM_009636, exon 1 of 21)	256	NM_001291857	11568	Mm.4665	NM_009636	ENSMUSG00000020473	Aebp1	ACLP	AE binding protein 1	protein-coding
common_peak1-11894-88-93-0.460823557492895-1.57431554914519	chr17	31981423	31984194	+	0	NA	3' UTR (NM_010831, exon 14 of 14)	3' UTR (NM_010831, exon 14 of 14)	9929	NM_010831	17691	Mm.290941	NM_010831	ENSMUSG00000024042	Sik1	Msk|Sik|Snf1lk	salt inducible kinase 1	protein-coding
common_peak1-10814-8-13--0.802132504110034-0.562038191119711	chr14	79551488	79551910	+	0	NA	intron (NM_027906, intron 37 of 44)	intron (NM_027906, intron 37 of 44)	95475	NM_001033215	105590	Mm.486536	NM_001033215	ENSMUSG00000071262	Zfp957	AU017455	zinc finger protein 957	protein-coding
common_peak2-30235-27-9-1.66961785600787-3.27210358356897	chr7	4690736	4691202	+	0	NA	promoter-TSS (NM_001115018)	promoter-TSS (NM_001115018)	-760	NM_146177	232811	Mm.247844	NM_146177	ENSMUSG00000059851	Suv420h2	BC024816|KMT5C|Suv4-20h2	suppressor of variegation 4-20 homolog 2 (Drosophila)	protein-coding
common_peak2-25991-12-11-0.0638134843664826-0.337263207250336	chr19	55232020	55232501	+	0	NA	Intergenic	Intergenic	-23115	NM_009348	21684	Mm.42139	NM_009348	ENSMUSG00000024979	Tectb	Tctnb	tectorin beta	protein-coding
common_peak1-8725-22-11-1.06232160436625-1.51503956548638	chr11	119127998	119128965	+	0	NA	promoter-TSS (NM_001159324)	promoter-TSS (NM_001159324)	-800	NM_001159324	14387	Mm.4793	NM_008064	ENSMUSG00000025579	Gaa	E430018M07Rik	glucosidase, alpha, acid	protein-coding
common_peak2-20623-34-54--0.399291186523394-0.62760443475974	chr10	80292432	80293143	+	0	NA	TTS (NR_027656)	TTS (NR_027656)	1245	NR_035503	100316778		NR_035503		Mir1982	mmu-mir-1982	microRNA 1982	ncRNA
unique_peak1-6240-12-0-3.64877598508764-4.21441993929574	chr7	18229873	18230258	+	0	NA	Intergenic	MERVL-int|LTR|ERVL	-27597	NR_002857	232919	Mm.153893	NR_002857		Psg-ps1	AV036018|Cea-6|Cea6	pregnancy specific glycoprotein pseudogene 1	pseudo
common_peak1-13262-33-43--0.128094056111768-0.324581211600972	chr19	34192032	34193375	+	0	NA	intron (NM_023903, intron 8 of 9)	intron (NM_023903, intron 8 of 9)	17270	NM_023903	78753	Mm.195937	NM_023903	ENSMUSG00000056078	Lipm	4632427C23Rik|AW227514|Lipl3	lipase, family member M	protein-coding
common_peak1-15929-11-11--0.0762689164695427-0.301029995663976	chr5	24843336	24843864	+	0	NA	intron (NM_001081383, intron 27 of 58)	B1_Mur2|SINE|Alu	114889	NM_144908	231050	Mm.246718	NM_144908	ENSMUSG00000038072	Galnt11	A430075I06Rik|AI648252|E430002F06Rik	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11	protein-coding
common_peak2-30035-27-18-0.743618437451651-1.1637339601586	chr6	125480665	125481769	+	0	NA	Intergenic	Intergenic	-21749	NM_011708	22371	Mm.22339	NM_011708	ENSMUSG00000001930	Vwf	6820430P06Rik|AI551257|B130011O06Rik|C630030D09|F8VWF|VWD	Von Willebrand factor homolog	protein-coding
common_peak2-25112-18-24--0.330937038546373-0.380101753845076	chr18	37825373	37826029	+	0	NA	intron (NM_033584, intron 1 of 3)	L1Md_T|LINE|L1	-3058	NM_033585	93710	Mm.247203	NM_033585		Pcdhga2	mKIAA0588	protocadherin gamma subfamily A, 2	protein-coding
common_peak2-21784-14-35--1.27070884108467-2.08778000015695	chr11	117809714	117810554	+	0	NA	Intergenic	Intergenic	20546	NM_007707	12702	Mm.3468	NM_007707	ENSMUSG00000053113	Socs3	Cis3|Cish3|EF-10|Ef10|SSI-3|Ssi3	suppressor of cytokine signaling 3	protein-coding
common_peak2-29529-52-111--0.699094931791905-2.4488162027751	chr6	37870722	37872020	+	0	NA	intron (NM_145076, intron 5 of 18)	L1MC|LINE|L1	20884	NM_001272076	21848	Mm.41063	NM_145076		Trim24	A130082H20Rik|AI447469|D430004I05Rik|TIF1|TIF1-alpha|TIF1alpha|Tif1a	tripartite motif-containing 24	protein-coding
common_peak2-32242-26-37--0.320028421285123-0.460129356264038	chrX	9272194	9273492	+	0	NA	Intergenic	Intergenic	-32734	NM_025975	67117	Mm.29150	NM_025975	ENSMUSG00000031176	Dynlt3	2310075M16Rik|AU042796|Tcte1l	dynein light chain Tctex-type 3	protein-coding
unique_peak1-3708-12-11-0.0638134843664826-0.337263207250336	chr19	44293219	44293933	+	0	NA	intron (NM_024450, intron 2 of 5)	MERVL-int|LTR|ERVL	15798	NM_024450	30049	Mm.480594	NM_024450	ENSMUSG00000025202	Scd3	4930513N16Rik	stearoyl-coenzyme A desaturase 3	protein-coding
common_peak1-19014-15-11-0.4272022498345-0.503257505534083	chr9	62812004	62812642	+	0	NA	intron (NM_019663, intron 1 of 13)	L1MA4|LINE|L1	16363	NM_019663	56469	Mm.431253	NM_019663	ENSMUSG00000032405	Pias1	2900068C24Rik|Ddxbp1|GBP	protein inhibitor of activated STAT 1	protein-coding
common_peak2-24808-27-24-0.347689761120511-0.550049347815233	chr17	70727964	70728879	+	0	NA	Intergenic	Intergenic	-45711	NM_177639	224997	Mm.311840	NM_027712	ENSMUSG00000003279	Dlgap1	4933422O14Rik|9630002F18|AI845682|AI848168|BB075781|D17Bwg0511e|GKAP/SAPAP|GKPA/SAPAP|Gkap|Sapap1|mKIAA4162	discs, large (Drosophila) homolog-associated protein 1	protein-coding
common_peak1-8171-31-17-1.05531366937081-1.94848218498813	chr10	59636686	59637810	+	0	NA	Intergenic	Intergenic	44760	NM_016803	53374	Mm.12866	NM_016803	ENSMUSG00000057337	Chst3	C6ST|C6ST-1|GST-0	carbohydrate (chondroitin 6/keratan) sulfotransferase 3	protein-coding
common_peak1-7802-24-18-0.545282389324131-0.776879508296351	chr1	118321100	118322271	+	0	NA	intron (NM_001077425, intron 14 of 23)	RLTR20B3|LTR|ERVK	739971	NM_001077425	636808	Mm.101576	NM_001077425	ENSMUSG00000070695	Cntnap5a	Caspr5-1|EG636808	contactin associated protein-like 5A	protein-coding
common_peak1-11390-14-8-0.729291158915332-0.771068449301682	chr15	97825503	97826175	+	0	NA	exon (NM_031163, exon 12 of 54)	exon (NM_031163, exon 12 of 54)	9316	NM_031163	12824	Mm.2423	NM_031163	ENSMUSG00000022483	Col2a1	Col2|Col2a|Col2a-1|Del1|Dmm|Lpk|M100856|Rgsc856	collagen, type II, alpha 1	protein-coding
unique_peak1-7342-8-6-0.197867495889966-1.03789460276074	chrX	150486699	150487206	+	0	NA	intron (NM_030036, intron 2 of 2).3	L1Md_F3|LINE|L1	2630	NM_030036	78092	Mm.46855	NM_030036	ENSMUSG00000094802	Samt1	Gm15144|OTTMUSG00000019268	spermatogenesis associated multipass transmembrane protein 1	protein-coding
unique_peak1-383-10-2-1.77145284428761-2.09384600808989	chr1	152617020	152617523	+	0	NA	intron (NM_001024720, intron 14 of 106)	intron (NM_001024720, intron 14 of 106)	223294	NM_001024720	545370	Mm.379425	NM_001024720	ENSMUSG00000066842	Hmcn1	EG545370|Gm201	hemicentin 1	protein-coding
unique_peak2-35515-5-11--1.28934283672701-1.477227296591	chr17	47925494	47925980	+	0	NA	intron (NM_001161722, intron 6 of 8)	B1_Mur2|SINE|Alu	3044	NM_011549	21425	Mm.2305	NM_011549	ENSMUSG00000023990	Tfeb	Tcfeb|bHLHe35	transcription factor EB	protein-coding
common_peak1-11347-122-71-1.41172735551968-12.8567356726205	chr15	88854668	88857068	+	0	NA	intron (NM_031260, intron 21 of 26)	intron (NM_031260, intron 21 of 26)	-34288	NM_001002005	406218	Mm.483059	NM_001002005	ENSMUSG00000058441	Panx2	-	pannexin 2	protein-coding
common_peak1-9458-19-10-0.943255708024389-1.16735254179725	chr11	103380840	103381649	+	0	NA	Intergenic	Intergenic	94809	NM_001033434	380730	Mm.380214	NM_001033434	ENSMUSG00000034239	Gm884	LRRC37	predicted gene 884	protein-coding
common_peak1-8351-20-22--0.03548717146582-0.301029995663994	chr10	57486337	57487259	+	0	NA	Intergenic	L1Md_T|LINE|L1	-17931	NM_021272	12140	Mm.3644	NM_021272	ENSMUSG00000019874	Fabp7	B-FABP|BFABP|Blbp|MRG	fatty acid binding protein 7, brain	protein-coding
common_peak2-20429-20-30--0.466121525795682-0.569352520859861	chr10	30618075	30618800	+	0	NA	Intergenic	Intergenic	-55848	NM_013904	15214	Mm.103573	NM_013904	ENSMUSG00000019789	Hey2	CHF1|Herp1|Hrt2|bHLHb32|hesr2	hairy/enhancer-of-split related with YRPW motif 2	protein-coding
unique_peak1-1722-8-0-3.00522241794757-2.70926996097583	chr13	96991289	96991815	+	0	NA	Intergenic	Intergenic	-89020	NM_029210	75209	Mm.40436	NM_029210	ENSMUSG00000051111	Sv2c	4930527L09Rik|AI841971	synaptic vesicle glycoprotein 2c	protein-coding
common_peak1-13619-38-24-0.927596469523806-2.07189913552604	chr2	24918763	24919747	+	0	NA	TTS (NM_001039387)	TTS (NM_001039387)	9356	NM_001177655	56876	Mm.42956	NM_020276	ENSMUSG00000006476	Nsmf	Jacob|Nelf	NMDA receptor synaptonuclear signaling and neuronal migration factor	protein-coding
unique_peak1-428-14-3-1.89921616035764-2.80787975886178	chr1	162137380	162138072	+	0	NA	intron (NM_009786, intron 2 of 5)	PB1D7|SINE|Alu	5297	NM_009786	12301	Mm.10702	NM_009786	ENSMUSG00000014226	Cacybp	SIP	calcyclin binding protein	protein-coding
common_peak2-24757-8-14--0.901668177660948-0.660903317613906	chr17	55959103	55959459	+	0	NA	intron (NM_139138, intron 14 of 16)	Lx6|LINE|L1	58937	NM_144546	104349	Mm.460659	NM_144546		Zfp119a	AL024077|Mzf13|Zfp119	zinc finger protein 119a	protein-coding
unique_peak2-34301-1-5--2.2120195109379-1.32905871926422	chr13	80883781	80884192	+	0	NA	Intergenic	Intergenic	-138697	NM_001042591	105171	Mm.423137	NM_001042591	ENSMUSG00000074794	Arrdc3	AI450344|mKIAA1376	arrestin domain containing 3	protein-coding
common_peak1-14795-12-19--0.673152109799724-0.546772548767014	chr3	89912739	89913250	+	0	NA	intron (NM_029937, intron 2 of 39)	B4A|SINE|B4	4940	NM_029937	77595	Mm.159949	NM_029937	ENSMUSG00000027939	Nup210l	4930548O11Rik|R26-EGFP|Tg(Gt(ROSA)26Sor-EGFP)130910Eps	nucleoporin 210-like	protein-coding
common_peak1-18642-31-14-1.3183480752046-2.63673708350641	chr8	111366563	111367506	+	0	NA	intron (NM_007496, intron 3 of 9)	B3|SINE|B2	-93726	NR_037295	100526511		NR_037295		Mir3108	mmu-mir-3108	microRNA 3108	ncRNA
common_peak1-19509-23-49--0.922088685265644-1.85759988472352	chrX	166660882	166661816	+	0	NA	Intergenic	Intergenic	-244500	NR_029457	654820	Mm.34441	NM_001039559	ENSMUSG00000072844	G530011O06Rik	-	RIKEN cDNA G530011O06 gene	ncRNA
common_peak2-20508-35-69--0.697912758482462-1.62370182176243	chr10	59641873	59642931	+	0	NA	Intergenic	L1_Mus3|LINE|L1	39606	NM_016803	53374	Mm.12866	NM_016803	ENSMUSG00000057337	Chst3	C6ST|C6ST-1|GST-0	carbohydrate (chondroitin 6/keratan) sulfotransferase 3	protein-coding
common_peak2-25288-16-10-0.658832023630764-0.699649909729472	chr18	69922883	69923473	+	0	NA	Intergenic	Intergenic	-162035	NM_201362	381175	Mm.266831	NM_201362	ENSMUSG00000038903	Ccdc68	BC046343	coiled-coil domain containing 68	protein-coding
common_peak1-17297-18-8-1.14299414978604-1.45476480588849	chr6	137515208	137516005	+	0	NA	intron (NM_001271588, intron 1 of 20)	intron (NM_001271588, intron 1 of 20)	3924	NM_001271595	13860	Mm.235346	NM_007945	ENSMUSG00000015766	Eps8	AW261790	epidermal growth factor receptor pathway substrate 8	protein-coding
common_peak2-21173-22-29--0.259606490521114-0.36542888694933	chr11	59654497	59655406	+	0	NA	Intergenic	Intergenic	-1682	NM_011991	26572	Mm.40	NM_011991	ENSMUSG00000019373	Cops3	Csn3|Sgn3	COP9 (constitutive photomorphogenic) homolog, subunit 3 (Arabidopsis thaliana)	protein-coding
common_peak1-12550-35-28-0.573389263334932-0.994385396256653	chr18	6281348	6282522	+	0	NA	Intergenic	Intergenic	-40413	NM_008448	16573	Mm.223744	NM_008448	ENSMUSG00000006740	Kif5b	AL022807|Khc|Khcs|Kns1|Ukhc	kinesin family member 5B	protein-coding
unique_peak1-692-11-6-0.701338662194009-1.32595962126035	chr10	80031384	80032074	+	0	NA	exon (NM_078477, exon 2 of 2)	exon (NM_078477, exon 2 of 2)	-7424	NM_025852	66932	Mm.1116	NM_025852	ENSMUSG00000047417	Rexo1	1700021P10Rik|2610511M11Rik|AW050347|EloA-BP1|Tceb3bp1	REX1, RNA exonuclease 1 homolog (S. cerevisiae)	protein-coding
unique_peak1-407-13-5-1.19350952991661-1.95509489018123	chr1	156997251	156997831	+	0	NA	Intergenic	ORR1B2|LTR|MaLR	-3631	NM_008209	15064	Mm.7580	NM_008209	ENSMUSG00000026471	Mr1	H2ls	major histocompatibility complex, class I-related	protein-coding
common_peak2-28323-77-97-0.169816735440789-0.478431179756661	chr4	133752068	133754362	+	0	NA	intron (NM_001080712, intron 2 of 7)	intron (NM_001080712, intron 2 of 7)	5704	NM_001080712	665186	Mm.318615	NM_001080712	ENSMUSG00000073747	Gm7534	EG665186	predicted gene 7534	protein-coding
common_peak2-31437-11-10-0.0492619656143161-0.31137425193576	chr8	95810324	95810639	+	0	NA	Intergenic	Intergenic	-6846	NM_144930	234564	Mm.29110	NM_144930	ENSMUSG00000031725	Ces1f	AU018778|CesML1|TGH-2	carboxylesterase 1F	protein-coding
unique_peak2-39425-5-12--1.40482005414695-1.62698961692433	chr9	42471838	42472320	+	0	NA	intron (NM_175481, intron 6 of 20)	A-rich|Low_complexity|Low_complexity	-191770	NM_173038	272589	Mm.34483	NM_173038	ENSMUSG00000037287	Tbcel	D330014K23|E130107N23Rik|Lrrc35	tubulin folding cofactor E-like	protein-coding
common_peak1-16370-15-28--0.845816244571916-1.02077663956385	chr5	122614088	122614688	+	0	NA	intron (NM_013636, intron 1 of 6)	intron (NM_013636, intron 1 of 6)	6100	NM_013636	19047	Mm.280784	NM_013636	ENSMUSG00000004455	Ppp1cc	PP-1G|PP1|dis2m1	protein phosphatase 1, catalytic subunit, gamma isoform	protein-coding
common_peak1-14854-17-31--0.781703661794962-0.932560489028298	chr3	95041837	95042548	+	0	NA	intron (NM_001024841, intron 1 of 1)	ID4_|SINE|ID	2839	NM_001024841	229588	Mm.387177	NM_001024841		Gm128	Ment|pmis1	predicted gene 128	protein-coding
unique_peak1-2065-37-2-3.94103057076466-11.1398106421873	chr15	33082589	33083742	+	0	NA	intron (NM_176073, intron 1 of 7)	RLTR10|LTR|ERVK	70281	NM_176073	54381	Mm.158251	NM_018755	ENSMUSG00000039007	Cpq	1190003P12Rik|2610034C17Rik|Hls2|Lal-1|Pgcp	carboxypeptidase Q	protein-coding
common_peak1-18925-17-19--0.103631756682325-0.301029995663974	chr9	44920246	44921050	+	0	NA	intron (NR_033547, intron 1 of 2)	intron (NR_033547, intron 1 of 2)	-5311	NM_001014761	72821	Mm.229373	NM_001014761	ENSMUSG00000070304	Scn2b	2810451E09Rik|AI840361|Gm183	sodium channel, voltage-gated, type II, beta	protein-coding
unique_peak1-4355-10-3-1.35641534500877-1.75805390616669	chr2	155742755	155743420	+	0	NA	intron (NR_024487, intron 2 of 9)	RMER19A|LTR|ERVK	12959	NM_018888	56046	Mm.158827	NM_018888	ENSMUSG00000005882	Uqcc1	2310079L17Rik|2410003P15Rik|3110038N19Rik|Bfzb|Bfzp|Cbp3|Uqcc	ubiquinol-cytochrome c reductase complex assembly factor 1	protein-coding
common_peak2-26057-9-8-0.0196884049619079-1.03275496310833	chr2	32440166	32440583	+	0	NA	Intergenic	Intergenic	-2224	NM_001276425	20448	Mm.27446	NM_011373	ENSMUSG00000079442	St6galnac4	SIAT7-D|ST6GalNAcIV|Siat7d	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4	protein-coding
common_peak1-9672-54-105--0.554834692933465-1.64488722754373	chr12	4916928	4918188	+	0	NA	Intergenic	RLTR47_MM|LTR|ERV1	-3232	NM_145441	217379	Mm.259170	NM_145441	ENSMUSG00000020634	Ubxn2a	6330407P03Rik|Ubxd4	UBX domain protein 2A	protein-coding
common_peak1-13176-14-12-0.198776442216552-0.373562084705529	chr19	15457916	15458585	+	0	NA	Intergenic	L1_Mus1|LINE|L1	540862	NM_001205339	107272	Mm.289936	NM_177420	ENSMUSG00000024640	Psat1	D8Ertd814e|EPIP|PSA|Psat	phosphoserine aminotransferase 1	protein-coding
common_peak2-27511-21-18-0.32156175182265-0.48779450977742	chr3	95280999	95281803	+	0	NA	intron (NM_001037737, intron 8 of 21)	B3A|SINE|B2	-21731	NM_007802	13038	Mm.272085	NM_007802	ENSMUSG00000028111	Ctsk	AI323530|MMS10-Q|Ms10q|catK	cathepsin K	protein-coding
common_peak1-18209-12-10-0.189344366450341-0.386243247519795	chr8	24555089	24555750	+	0	NA	intron (NM_013834, intron 2 of 2)	ID4_|SINE|ID	33445	NM_013834	20377	Mm.281691	NM_013834	ENSMUSG00000031548	Sfrp1	2210415K03Rik|AW011917|AW107218|AW742929|sFRP-1	secreted frizzled-related protein 1	protein-coding
unique_peak2-37055-6-4-0.24347001549294-0.989110657569874	chr3	138062684	138063092	+	0	NA	Intergenic	Lx|LINE|L1	-15573	NM_011996	26876	Mm.158750	NM_011996	ENSMUSG00000037797	Adh4	Adh2	alcohol dehydrogenase 4 (class II), pi polypeptide	protein-coding
unique_peak1-3645-17-8-1.04837133676273-1.30305656033811	chr19	38590425	38591148	+	0	NA	Intergenic	B2_Mm1a|SINE|B2	-7901	NM_019588	74055	Mm.34031	NM_019588	ENSMUSG00000024998	Plce1	4933403A21Rik|PLCepsilon|Plce|mKIAA1516	phospholipase C, epsilon 1	protein-coding
common_peak1-13168-15-27--0.795190171501948-0.918917574080418	chr19	11818319	11818995	+	0	NA	Intergenic	RMER1A|Other|Other	-3392	NM_008118	14603	Mm.456	NM_008118	ENSMUSG00000024682	Gif	AV073125	gastric intrinsic factor	protein-coding
common_peak1-14746-39-53--0.139126255244315-0.335101043913478	chr3	87525172	87526197	+	0	NA	intron (NM_001003912, intron 20 of 39)	intron (NM_001003912, intron 20 of 39)	26861	NM_028971	74485	Mm.474494	NM_028971	ENSMUSG00000023084	Lrrc71	4933430H15Rik	leucine rich repeat containing 71	protein-coding
common_peak1-17438-14-17--0.270708841084668-0.328191099940267	chr7	16272718	16273299	+	0	NA	Intergenic	L1_Mus2|LINE|L1	-47882	NM_145707	246791	Mm.425362	NM_145707	ENSMUSG00000066772	Obox3	Ohx	oocyte specific homeobox 3	protein-coding
common_peak2-22776-10-10--0.103016273628528-0.301029995663987	chr14	31964745	31965189	+	0	NA	intron (NM_138672, intron 27 of 68)	intron (NM_138672, intron 27 of 68)	16860	NM_138672	192187	Mm.220821	NM_138672	ENSMUSG00000042286	Stab1	FEEL-1|FELE-1|MFEEL-1|MS-1|STAB-1|mKIAA0246	stabilin 1	protein-coding
common_peak1-15523-13-8-0.608547029195456-0.660903317613904	chr4	117681614	117682388	+	0	NA	intron (NM_001285521, intron 4 of 10)	L1MEc|LINE|L1	-79633	NM_001284192	11876	Mm.56897	NM_009711	ENSMUSG00000028539	Artn	neublastin	artemin	protein-coding
common_peak2-31194-8-10--0.454209200689727-1.078512453669	chr8	57510833	57511379	+	0	NA	Intergenic	Intergenic	874655	NM_175939	244486	Mm.67684	NM_175939	ENSMUSG00000046258	Adam29	-	a disintegrin and metallopeptidase domain 29	protein-coding
common_peak1-10308-10-10--0.103016273628528-0.301029995663987	chr13	67306054	67306592	+	0	NA	intron (NM_001048204, intron 3 of 3)	intron (NM_001048204, intron 3 of 3)	10881	NM_001048204	218311	Mm.82396	NM_183156	ENSMUSG00000051037	Zfp455	3732412P20Rik|Rslcan-10	zinc finger protein 455	protein-coding
common_peak1-13014-22-31--0.352715894912595-0.440892966163086	chr19	5050752	5051701	+	0	NA	exon (NM_145495, exon 2 of 10)	exon (NM_145495, exon 2 of 10)	418	NM_145495	225870	Mm.271922	NM_145495	ENSMUSG00000024883	Rin1	-	Ras and Rab interactor 1	protein-coding
common_peak2-22927-34-37-0.134141013557681-0.369793428364259	chr14	46821528	46822454	+	0	NA	Intergenic	MTEb|LTR|MaLR	118289	NR_002875	218963	Mm.282093	NR_002875		Gm1821	-	ubiquitin pseudogene	pseudo
common_peak2-30268-18-33--0.774543690021988-1.00055860626307	chr7	16119379	16120185	+	0	NA	Intergenic	Lx2B|LINE|L1	-12824	NM_027802	71468	Mm.415195	NM_027802	ENSMUSG00000054310	Obox1	7420700M11Rik|AU015708|AU024152	oocyte specific homeobox 1	protein-coding
common_peak1-18430-15-24--0.631691439219068-0.650819692678081	chr8	78820350	78820957	+	0	NA	Intergenic	Intergenic	603419	NR_028579	100039211	Mm.367571	NR_028579	ENSMUSG00000074235	Gm10649	ENSMUSG00000074235	predicted gene 10649	ncRNA
unique_peak2-39482-1-6--2.43441193227435-1.56314192529759	chr9	57973629	57973876	+	0	NA	Intergenic	Intergenic	-3143	NM_001162475	20897	Mm.10801	NM_009291	ENSMUSG00000032327	Stra6	AI891933	stimulated by retinoic acid gene 6	protein-coding
common_peak2-27326-11-17--0.661231417190699-0.58239619684445	chr3	67582788	67583490	+	0	NA	Intergenic	B3A|SINE|B2	-113003	NM_001113419	100505386	Mm.331064	NM_001113419		Gm21949	Iqcj-schip1|Schip-1-iqcj	predicted gene, 21949	protein-coding
common_peak1-9923-71-98-0.0150875586403618-0.305416883213638	chr12	101082541	101084081	+	0	NA	intron (NM_030172, intron 5 of 5)	intron (NM_030172, intron 5 of 5)	38341	NM_030172	78767	Mm.235920	NM_030172	ENSMUSG00000021176	Efcab11	2610021K21Rik|2610110A13Rik	EF-hand calcium binding domain 11	protein-coding
unique_peak2-38820-6-9--0.75652998450706-1.11707584880836	chr7	139971732	139972323	+	0	NA	intron (NM_212473, intron 1 of 4)	intron (NM_212473, intron 1 of 4)	6591	NM_175268	77938	Mm.225649	NM_175268	ENSMUSG00000030956	Fam53b	A930008G19Rik|mKIAA0140	family with sequence similarity 53, member B	protein-coding
common_peak1-7568-17-31--0.781703661794962-0.932560489028298	chr1	43445785	43446384	+	0	NA	Intergenic	Intergenic	-56512	NM_010879	17974	Mm.389903	NM_010879	ENSMUSG00000066877	Nck2	4833426I10Rik|Grb4|NCKbeta|Nck-2	non-catalytic region of tyrosine kinase adaptor protein 2	protein-coding
common_peak2-24791-38-31-0.57145265929853-1.10165134406427	chr17	65663296	65664482	+	0	NA	intron (NM_001289485, intron 14 of 15)	L1_Mus1|LINE|L1	226233	NM_001008973	381107	Mm.141275	NM_001008973	ENSMUSG00000045036	Tmem232	E130009J12Rik|Gm940|Tes13-L|Tes13-S	transmembrane protein 232	protein-coding
common_peak2-28924-17-22--0.305265617851975-0.348739088570342	chr5	92812405	92813266	+	0	NA	intron (NM_181728, intron 2 of 9)	intron (NM_181728, intron 2 of 9)	-20513	NR_038116	56066	Mm.131723	NM_019494	ENSMUSG00000060183	Cxcl11	Cxc11|H174|I-tac|Ip9|Itac|Scyb11|Scyb9b|b-R1|betaR1	chemokine (C-X-C motif) ligand 11	protein-coding
common_peak1-7908-12-12--0.0516637330534535-0.309718203022949	chr1	136136631	136137152	+	0	NA	Intergenic	Intergenic	-4857	NM_001008533	11539	Mm.298908	NM_009629	ENSMUSG00000042429	Adora1	A1-AR|A1AR|A1R|AA1R|AI848715|BB176431|Ri	adenosine A1 receptor	protein-coding
unique_peak2-35592-1-5--2.2120195109379-1.32905871926422	chr17	78201056	78201485	+	0	NA	Intergenic	Intergenic	-398318	NM_015800	50766	Mm.311912	NM_015800	ENSMUSG00000024074	Crim1	AU015004	cysteine rich transmembrane BMP regulator 1 (chordin like)	protein-coding
common_peak1-11227-12-9-0.326847890200276-0.459837087125828	chr15	79357155	79357786	+	0	NA	TTS (NM_199080)	TTS (NM_199080)	5877	NM_152806	67040	Mm.29644	NM_152806	ENSMUSG00000055065	Ddx17	2610007K22Rik|A430025E01Rik|AI047725|C80929|Gm926|p72	DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	protein-coding
common_peak1-7993-11-24--1.13516260552311-1.3750876294627	chr1	162570646	162571261	+	0	NA	intron (NM_013862, intron 12 of 20)	L1Md_A|LINE|L1	-63069	NM_001146330	620246	Mm.478780	NM_001146330		Gpr52	EG620246	G protein-coupled receptor 52	protein-coding
common_peak1-14111-15-33--1.07529809069468-1.60877160026698	chr2	127247803	127248652	+	0	NA	Intergenic	Intergenic	-2708	NM_001081089	215456	Mm.440454	NM_001081089	ENSMUSG00000046338	Gpat2	A530057A03Rik|Gm116|xGPAT1	glycerol-3-phosphate acyltransferase 2, mitochondrial	protein-coding
common_peak1-14142-22-22-0.123722149030391-0.342639663781856	chr2	131491813	131492494	+	0	NA	Intergenic	Intergenic	-104132	NM_013460	11550	Mm.389380	NM_013460		Adra1d	Adra-1|Adra1|Adra1a|Gpcr8|Spr8|[a]1d|alpha1D-AR	adrenergic receptor, alpha 1d	protein-coding
unique_peak2-36210-3-8--1.58390809140159-1.39487600375387	chr2	33205212	33205769	+	0	NA	intron (NM_001290570, intron 1 of 16)	intron (NM_001290570, intron 1 of 16)	21524	NM_001290570	241308	Mm.274249	NM_175211	ENSMUSG00000038831	Ralgps1	5830418G11Rik|AI853783|AI854138|RALGEF2|RALGPS1A|RalGEF 2|mKIAA0351	Ral GEF with PH domain and SH3 binding motif 1	protein-coding
unique_peak1-197-6-0-2.5653981103803-2.10720996964787	chr1	82274236	82274666	+	0	NA	intron (NM_010570, intron 1 of 1)	intron (NM_010570, intron 1 of 1)	13563	NM_010570	16367	Mm.4952	NM_010570	ENSMUSG00000055980	Irs1	G972R|IRS-1	insulin receptor substrate 1	protein-coding
unique_peak2-36911-4-6--0.830815435910851-0.989110657569874	chr3	98021209	98021503	+	0	NA	Intergenic	Lx5|LINE|L1	-4723	NM_026328	67709	Mm.46306	NM_026328	ENSMUSG00000027876	Reg4	2010002L15Rik|GISP|RELP	regenerating islet-derived family, member 4	protein-coding
common_peak1-11509-16-41--1.2740537805107-2.52371590646434	chr16	17891097	17891741	+	0	NA	intron (NM_010048, intron 1 of 9)	CpG	402	NM_010048	13356	Mm.254515	NM_010048	ENSMUSG00000003166	Dgcr2	9930034O06Rik|DGS-C|Dgsc|Idd|Lan|Sez12|mKIAA0163	DiGeorge syndrome critical region gene 2	protein-coding
common_peak1-7984-16-11-0.533301141546906-0.58239619684445	chr1	160520942	160521622	+	0	NA	intron (NM_001205204, intron 11 of 22)	L1_Mur2|LINE|L1	85526	NR_030441	735253		NR_030441		Mir488	Mirn488|mmu-mir-488	microRNA 488	ncRNA
unique_peak2-35104-4-6--0.830815435910851-0.989110657569874	chr16	21338457	21338881	+	0	NA	Intergenic	Intergenic	-41724	NR_046162	328646	Mm.404748	NR_046162	ENSMUSG00000096918	Gm16863	A830060N17	predicted gene, 16863	ncRNA
common_peak2-21047-32-35-0.109167017777348-0.348003640999429	chr11	40694182	40695244	+	0	NA	Intergenic	(TA)n|Simple_repeat|Simple_repeat	-125925	NM_009831	12450	Mm.2103	NM_009831	ENSMUSG00000020326	Ccng1	AI314029	cyclin G1	protein-coding
unique_peak2-38956-5-5--0.289342836727009-0.909929411522249	chr8	31720091	31720488	+	0	NA	Intergenic	L1Md_F2|LINE|L1	41422	NR_045856	71314	Mm.158666	NR_045856	ENSMUSG00000097044	4933433F19Rik	-	RIKEN cDNA 4933433F19 gene	ncRNA
unique_peak2-37500-4-4--0.345388608740609-0.864171920961574	chr5	8414895	8415282	+	0	NA	intron (NM_001190717, intron 2 of 11)	RMER4A|LTR|ERVK	7628	NM_013726	27214	Mm.292470	NM_013726	ENSMUSG00000002297	Dbf4	AA545217|Ask	DBF4 homolog (S. cerevisiae)	protein-coding
unique_peak1-2194-18-5-1.7279566505072-2.39372960542229	chr15	66500597	66501351	+	0	NA	Intergenic	MLT1B|LTR|MaLR	-1358	NM_009375	21819	Mm.441333	NM_009375	ENSMUSG00000053469	Tg	Tgn|cog	thyroglobulin	protein-coding
common_peak1-17707-20-28--0.369906210536379-0.457753417732779	chr7	78913697	78914659	+	0	NA	Intergenic	Lx4B|LINE|L1	537303	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding
unique_peak1-6834-7-0-2.79909083029819-2.40823996531185	chr8	80782749	80783205	+	0	NA	intron (NM_183096, intron 7 of 13)	intron (NM_183096, intron 7 of 13)	45736	NM_183096	73301	Mm.61243	NM_183096	ENSMUSG00000037101	Ttc29	1700031F13Rik	tetratricopeptide repeat domain 29	protein-coding
unique_peak1-4226-9-7-0.18961340640422-1.05908390183068	chr2	122720722	122721232	+	0	NA	Intergenic	L1Md_A|LINE|L1	113242	NM_021507	59010	Mm.28986	NM_021507	ENSMUSG00000005803	Sqrdl	0610039J17Rik|4930557M22Rik	sulfide quinone reductase-like (yeast)	protein-coding
unique_peak1-3386-21-9-1.24756117037887-1.83731222263754	chr19	3928707	3929598	+	0	NA	intron (NM_026316, intron 1 of 9)	intron (NM_026316, intron 1 of 9)	564	NM_026316	67689	Mm.109341	NM_026316	ENSMUSG00000024885	Aldh3b1	1700001N19Rik|ALDH4|ALDH7	aldehyde dehydrogenase 3 family, member B1	protein-coding
unique_peak1-3577-11-0-3.50869358425161-3.61235994796777	chr19	29067216	29067768	+	0	NA	intron (NM_025950, intron 1 of 6)	intron (NM_025950, intron 1 of 6)	2508	NM_025950	67072	Mm.78875	NM_025950	ENSMUSG00000024780	Cdc37l1	2700033A15Rik|BB159850|Cdc37l|Harc	cell division cycle 37-like 1	protein-coding
common_peak2-25253-10-8-0.186490343566457-1.078512453669	chr18	65521153	65521701	+	0	NA	intron (NM_001037294, intron 3 of 12)	intron (NM_001037294, intron 3 of 12)	32115	NM_001037294	225638	Mm.296528	NM_001037294	ENSMUSG00000032845	Alpk2	Gm549|Hak	alpha-kinase 2	protein-coding
unique_peak2-36615-6-10--0.894033508256995-1.21398586181642	chr3	126746206	126746841	+	0	NA	Intergenic	Intergenic	-45153	NM_178655	109676	Mm.220242	NM_178655	ENSMUSG00000032826	Ank2	AI835472|AW491075|Ank-2	ankyrin 2, brain	protein-coding
common_peak2-26990-10-11--0.228547155712387-0.31137425193576	chr2	168080868	168081417	+	0	NA	Intergenic	Intergenic	13689	NM_001081134	241794	Mm.425102	NM_001081134	ENSMUSG00000074575	Kcng1	AW536275|OTTMUSG00000016048	potassium voltage-gated channel, subfamily G, member 1	protein-coding
unique_peak1-5833-7-1-1.79909083029819-1.80617997398389	chr6	72456231	72456738	+	0	NA	Intergenic	Intergenic	-37901	NM_007599	12332	Mm.18626	NM_007599	ENSMUSG00000056737	Capg	gCap39|mbh1	capping protein (actin filament), gelsolin-like	protein-coding
common_peak2-27663-12-26--1.10611151707583-1.26025077975594	chr3	108839825	108840706	+	0	NA	Intergenic	Intergenic	-9740	NM_001163567	329739	Mm.69013	NM_001163567	ENSMUSG00000040339	Fam102b	1600010D10Rik|B430201A12Rik	family with sequence similarity 102, member B	protein-coding
common_peak2-31053-36-22-0.955759130110741-2.05089002217436	chr8	18950933	18951762	+	0	NA	promoter-TSS (NM_001286469)	promoter-TSS (NM_001286469)	-372	NM_001113350	319581	Mm.111354	NM_176951	ENSMUSG00000039814	Xkr5	5430438H03Rik|XRG5	X Kell blood group precursor-related family, member 5	protein-coding
unique_peak2-34411-20-55--1.31928013746641-3.47380072378137	chr14	11552423	11554378	+	0	NA	intron (NM_010210, intron 3 of 8)	intron (NM_010210, intron 3 of 8)	441146	NM_010210	14198	Mm.397619	NM_010210	ENSMUSG00000060579	Fhit	AW045638|Fra14A2	fragile histidine triad gene	protein-coding
common_peak1-17768-11-6-0.701338662194009-1.32595962126035	chr7	90475374	90475950	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-257779	NM_177695	233424	Mm.486619	NM_177695		Tmc3	9030203A06	transmembrane channel-like gene family 3	protein-coding
unique_peak2-36353-1547-1511-1.45158809258283-275.582267523644	chr2	98666154	98667414	+	0	NA	Intergenic	Intergenic	1358970	NM_178725	241568	Mm.241682	NM_178725	ENSMUSG00000050587	Lrrc4c	6430556C10Rik|NGL-1	leucine rich repeat containing 4C	protein-coding
unique_peak2-37531-4-7--1.02346051385325-1.09384600808989	chr5	24577764	24578147	+	0	NA	intron (NM_145401, intron 1 of 15)	intron (NM_145401, intron 1 of 15)	28505	NM_145401	108099	Mm.33649	NM_145401	ENSMUSG00000028944	Prkag2	2410051C13Rik|AAKG|AAKG2|AI854673|H91620p|WPWS	protein kinase, AMP-activated, gamma 2 non-catalytic subunit	protein-coding
unique_peak2-38303-10-11--0.228547155712387-0.31137425193576	chr6	136541453	136542091	+	0	NA	intron (NM_019426, intron 10 of 14)	ID_B1|SINE|B4	68642	NM_025806	66857	Mm.3311	NM_025806	ENSMUSG00000030214	Plbd1	1100001H23Rik	phospholipase B domain containing 1	protein-coding
common_peak2-24359-31-69--0.904044346131843-2.43183886932982	chr17	6654282	6655928	+	0	NA	promoter-TSS (NM_001166630).2	promoter-TSS (NM_001166630).2	-41	NM_001166627	100040531	Mm.457987	NM_001166627	ENSMUSG00000095677	Dynlt1f	100040631|Dynlt1e	dynein light chain Tctex-type 1F	protein-coding
unique_peak1-5010-6-0-2.5653981103803-2.10720996964787	chr4	122878503	122878848	+	0	NA	promoter-TSS (NM_001085502)	promoter-TSS (NM_001085502)	-121	NM_001085502	230718	Mm.354635	NM_001085502	ENSMUSG00000054958	Nt5c1a	Cn1a|Gm49	5'-nucleotidase, cytosolic IA	protein-coding
common_peak1-13089-11-11--0.0762689164695427-0.301029995663976	chr19	7040223	7040936	+	0	NA	intron (NM_008874, intron 4 of 30)	ID_B1|SINE|B4	3725	NM_008874	18797	Mm.273204	NM_008874	ENSMUSG00000024960	Plcb3	mKIAA4098	phospholipase C, beta 3	protein-coding
common_peak2-26540-11-6-0.701338662194009-1.32595962126035	chr2	92739712	92740142	+	0	NA	Intergenic	ORR1A4-int|LTR|MaLR	-15331	NM_030725	80976	Mm.33490	NM_030725	ENSMUSG00000027220	Syt13	5730409J20Rik|AI549909|mKIAA1427	synaptotagmin XIII	protein-coding
unique_peak2-39141-6-7--0.434601889619698-0.97990265578305	chr8	85532696	85533144	+	0	NA	intron (NM_177378, intron 4 of 6)	intron (NM_177378, intron 4 of 6)	145665	NM_177378	330812	Mm.491438	NM_177378	ENSMUSG00000047747	Rnf150	A630007N06Rik|C030044C12Rik|Greul5|mKIAA1214	ring finger protein 150	protein-coding
unique_peak2-34568-15-20--0.380152672223105-0.397739447719386	chr14	66105378	66106344	+	0	NA	Intergenic	L1MD2|LINE|L1	-61552	NM_010932	18155	Mm.16347	NM_010932	ENSMUSG00000045731	Pnoc	N/OFQ|N23K|Npnc1|OFQ/N	prepronociceptin	protein-coding
common_peak2-21483-13-14--0.12841856497075-0.301029995663977	chr11	88235424	88235945	+	0	NA	intron (NM_054043, intron 7 of 13)	intron (NM_054043, intron 7 of 13)	69409	NR_039545	100628571		NR_039545	miRBase:MI0016973	Mir378b	mmu-mir-378b	microRNA 378b	ncRNA
unique_peak2-34622-4-7--1.02346051385325-1.09384600808989	chr14	76597954	76598353	+	0	NA	Intergenic	Intergenic	87455	NM_013745	27275	Mm.21138	NM_013745	ENSMUSG00000022009	Nufip1	Nufip	nuclear fragile X mental retardation protein interacting protein 1	protein-coding
common_peak1-19123-15-10-0.552733131918359-0.604422558181019	chr9	77806347	77807043	+	0	NA	intron (NM_134255, intron 2 of 7)	intron (NM_134255, intron 2 of 7)	41523	NM_134255	68801	Mm.430736	NM_134255	ENSMUSG00000032349	Elovl5	1110059L23Rik|AI747313|AU043003|HELO1	ELOVL family member 5, elongation of long chain fatty acids (yeast)	protein-coding
common_peak1-17587-18-16-0.225456309978012-0.397739447719379	chr7	42505097	42505824	+	0	NA	Intergenic	Intergenic	-3192248	NM_001013810	434171	Mm.60990	NM_001013810	ENSMUSG00000060565	Gm5591	EG434171	predicted gene 5591	protein-coding
unique_peak2-33520-4-5--0.608423014574403-0.909929411522249	chr11	75687981	75688339	+	0	NA	intron (NM_029548, intron 4 of 7)	intron (NM_029548, intron 4 of 7)	36401	NM_029548	380714	Mm.425697	NM_029548	ENSMUSG00000020847	Rph3al	Gm1753|Noc2	rabphilin 3A-like (without C2 domains)	protein-coding
common_peak1-8769-31-48--0.389471173302085-0.611014125894502	chr11	6415777	6416713	+	0	NA	exon (NM_178440, exon 8 of 22)	exon (NM_178440, exon 8 of 22)	4716	NM_178440	246177	Mm.239554	NM_178440	ENSMUSG00000020437	Myo1g	E430002D17Rik	myosin IG	protein-coding
unique_peak2-35926-7-15--1.20090916970181-0.947446088118041	chr19	6921259	6921896	+	0	NA	intron (NM_001081291, intron 24 of 26)	intron (NM_001081291, intron 24 of 26)	-6460	NM_019924	56613	Mm.20914	NM_019924	ENSMUSG00000024952	Rps6ka4	1110069D02Rik|90kDa|AI848992|Msk2|mMSK2	ribosomal protein S6 kinase, polypeptide 4	protein-coding
common_peak2-22261-7-5-0.214128329577033-1.01466476204226	chr13	5842068	5842475	+	0	NA	Intergenic	Intergenic	15067	NR_045891	71867	Mm.179181	NR_045891		1700016G22Rik	-	RIKEN cDNA 1700016G22 gene	ncRNA
unique_peak1-3713-9-5-0.604650905683064-1.21398586181642	chr19	44930363	44930989	+	0	NA	Intergenic	L1MC5|LINE|L1	-20248	NR_045315	73322	Mm.250457	NR_045315	ENSMUSG00000092369	1700039E22Rik	-	RIKEN cDNA 1700039E22 gene	ncRNA
unique_peak1-3872-9-4-0.867685311516858-1.36011389749466	chr2	11535239	11535761	+	0	NA	Intergenic	ETnERV2-int|LTR|ERVK	-10674	NM_152824	76938	Mm.182769	NM_152824	ENSMUSG00000037197	Rbm17	2700027J02Rik	RNA binding motif protein 17	protein-coding
common_peak2-22237-11-15--0.491306415748387-0.435191258261915	chr13	24280802	24281437	+	0	NA	intron (NM_026825, intron 2 of 37)	intron (NM_026825, intron 2 of 37)	91540	NM_026825	68732	Mm.211047	NM_026825	ENSMUSG00000021338	Lrrc16a	1110037D04Rik|AI425970|CARMIL|D130057M20|Lrrc16	leucine rich repeat containing 16A	protein-coding
unique_peak1-6728-9-0-3.18961340640422-3.01029995663981	chr8	44802119	44802752	+	0	NA	Intergenic	Intergenic	-17590	NM_001079931	384814	Mm.491652	NM_001079931		Gm5347	EG384814	predicted gene 5347	protein-coding
unique_peak1-1803-11-4-1.18676548936425-1.68134727924692	chr14	25451549	25452150	+	0	NA	Intergenic	ID_B1|SINE|B4	141946	NM_011297	20088	Mm.16775	NM_011297	ENSMUSG00000025290	Rps24	-	ribosomal protein S24	protein-coding
common_peak2-26147-24-34--0.33607311417725-0.427313034957882	chr2	13977579	13978323	+	0	NA	promoter-TSS (NM_013935)	promoter-TSS (NM_013935)	-289	NM_013935	30963	Mm.241205	NM_013935	ENSMUSG00000063275	Ptpla	HACD1	protein tyrosine phosphatase-like (proline instead of catalytic arginine), member a	protein-coding
common_peak2-30272-14-33--1.18824668089269-1.80321929531239	chr7	16286304	16287090	+	0	NA	Intergenic	MuRRS-int|LTR|ERV1	-49022	NM_145709	252829	Mm.222738	NM_145709		Obox5	C87544	oocyte specific homeobox 5	protein-coding
common_peak1-7798-89-102-0.348466227642784-1.08684663692991	chr1	106795740	106796974	+	0	NA	intron (NM_011800, intron 1 of 11)	B4A|SINE|B4	130961	NM_011800	23836	Mm.103640	NM_011800	ENSMUSG00000050840	Cdh20	Cdh7	cadherin 20	protein-coding
unique_peak1-3790-10-3-1.35641534500877-1.75805390616669	chr19	56561440	56561966	+	0	NA	TTS (NM_001164263)	TTS (NM_001164263)	25576	NM_172641	226245	Mm.156742	NM_172641	ENSMUSG00000035818	Plekhs1	9930023K05Rik	pleckstrin homology domain containing, family S member 1	protein-coding
common_peak2-27437-12-12--0.0516637330534535-0.309718203022949	chr3	89896506	89897113	+	0	NA	TTS (NM_001293748)	TTS (NM_001293748)	-11245	NM_029937	77595	Mm.159949	NM_029937	ENSMUSG00000027939	Nup210l	4930548O11Rik|R26-EGFP|Tg(Gt(ROSA)26Sor-EGFP)130910Eps	nucleoporin 210-like	protein-coding
common_peak1-12748-36-27-0.671966164110151-1.28863469260242	chr18	57746562	57747930	+	0	NA	intron (NM_029290, intron 3 of 6)	intron (NM_029290, intron 3 of 6)	-35195	NR_015494	75084	Mm.243841	NR_015494	ENSMUSG00000086607	4930511M06Rik	-	RIKEN cDNA 4930511M06 gene	ncRNA
common_peak2-26236-13-13--0.0288828914198356-0.309074325783021	chr2	28526290	28526887	+	0	NA	intron (NM_001289575, intron 9 of 22)	intron (NM_001289575, intron 9 of 22)	28583	NM_027283	69987	Mm.239376	NM_027283	ENSMUSG00000026809	1700026L06Rik	MAST	RIKEN cDNA 1700026L06 gene	protein-coding
unique_peak2-38010-6-5--0.0195643903408542-0.947717972411649	chr6	31062571	31062975	+	0	NA	intron (NR_110471, intron 3 of 3)	intron (NR_110471, intron 3 of 3)	-49680	NR_029532	387223		NR_029532	miRBase:MI0000143	Mir29b-1	Mirn29b|Mirn29b-1	microRNA 29b-1	ncRNA
unique_peak1-1202-7-2-1.21412832957703-1.45399745587252	chr11	103396911	103397424	+	0	NA	intron (NM_001033434, intron 11 of 13)	intron (NM_001033434, intron 11 of 13)	78886	NM_001033434	380730	Mm.380214	NM_001033434	ENSMUSG00000034239	Gm884	LRRC37	predicted gene 884	protein-coding
unique_peak1-1632-10-7-0.356415345008769-1.12966497611638	chr13	45706771	45707259	+	0	NA	intron (NM_001199304, intron 5 of 6)	intron (NM_001199304, intron 5 of 6)	104177	NM_025508	66355	Mm.290802	NM_025508	ENSMUSG00000000253	Gmpr	2310004P21Rik|AV028449	guanosine monophosphate reductase	protein-coding
common_peak1-12495-10-8-0.186490343566457-1.078512453669	chr17	87302235	87302751	+	0	NA	Intergenic	L4|LINE|RTE	-14195	NM_001277980	78469	Mm.67234	NM_030104	ENSMUSG00000037689	Tmem247	1700090G07Rik	transmembrane protein 247	protein-coding
common_peak2-31512-23-22-0.198205548452068-0.373496418836697	chr8	107544809	107545563	+	0	NA	TTS (NM_001272045)	TTS (NM_001272045)	20433	NM_001272045	436059	Mm.491825	NM_001272045	ENSMUSG00000091813	Ces2h	Ces2|EG436059|Gm5744	carboxylesterase 2H	protein-coding
unique_peak2-37387-7-7--0.200909169701811-0.97990265578305	chr4	139797754	139798159	+	0	NA	intron (NM_198610, intron 1 of 9)	intron (NM_198610, intron 1 of 9)	4770	NM_198610	230868	Mm.298731	NM_198610	ENSMUSG00000040972	Igsf21	BC055811|Gm141	immunoglobulin superfamily, member 21	protein-coding
unique_peak1-2351-7-3-0.799090830298189-1.23214870625617	chr15	85703004	85703482	+	0	NA	intron (NM_001168672, intron 8 of 11)	MLT1A0|LTR|MaLR	-6514	NM_028063	72026	Mm.158211	NM_028063	ENSMUSG00000022386	Trmu	1110005N20Rik|1600025P05Rik|AI314320|Trmt1	tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase	protein-coding
common_peak1-17037-102-132-0.215806041338364-0.668873208643878	chr6	92090925	92092416	+	0	NA	intron (NM_011630, intron 3 of 14)	intron (NM_011630, intron 3 of 14)	42347	NM_025578	64658	Mm.87062	NM_025578	ENSMUSG00000014551	Mrps25	2810429N01Rik|Rpms25	mitochondrial ribosomal protein S25	protein-coding
common_peak1-15422-7-8--0.370834171144123-1.00793137938329	chr4	88935750	88936221	+	0	NA	intron (NM_009877, intron 1 of 2)	intron (NM_009877, intron 1 of 2)	4538	NM_009877	12578	Mm.4733	NM_009877	ENSMUSG00000044303	Cdkn2a	ARF-INK4a|Arf|INK4a-ARF|Ink4a/Arf|MTS1|Pctr1|p16|p16(INK4a)|p16INK4a|p19<ARF>|p19ARF	cyclin-dependent kinase inhibitor 2A	protein-coding
common_peak2-20373-10-10--0.103016273628528-0.301029995663987	chr10	14085935	14086543	+	0	NA	Intergenic	MTE-int|LTR|MaLR	178603	NM_001002268	215798	Mm.440142	NM_001002268	ENSMUSG00000039116	Gpr126	1190004A11Rik|AI449247|AW045736|DREG|Gm222	G protein-coupled receptor 126	protein-coding
common_peak2-22312-20-16-0.400611943340854-0.507611860039817	chr13	21408128	21408908	+	0	NA	intron (NM_145451, intron 2 of 4)	intron (NM_145451, intron 2 of 4)	4446	NM_145451	75512	Mm.46195	NM_145451	ENSMUSG00000004341	Gpx6	1700020G18Rik|Ry2d1|olfactory	glutathione peroxidase 6	protein-coding
common_peak2-26163-24-18-0.545282389324131-0.776879508296351	chr2	18689501	18690349	+	0	NA	Intergenic	Intergenic	69276	NM_001001334	381350	Mm.330024	NM_001001334		BC061194	-	cDNA sequence BC061194	protein-coding
common_peak1-14605-33-18-1.08341004908194-2.15925086250253	chr3	51670037	51671345	+	0	NA	intron (NM_001004176, intron 1 of 4)	intron (NM_001004176, intron 1 of 4)	205576	NM_174995	211666	Mm.24679	NM_174995	ENSMUSG00000074604	Mgst2	GST2|MGST-II	microsomal glutathione S-transferase 2	protein-coding
common_peak2-28481-41-90--0.806645935350036-2.53634419610406	chr4	155490827	155492463	+	0	NA	intron (NM_177205, intron 3 of 9)	intron (NM_177205, intron 3 of 9)	7538	NM_177205	230996	Mm.318925	NM_145557	ENSMUSG00000059939	9430015G10Rik	-	RIKEN cDNA 9430015G10 gene	protein-coding
unique_peak1-2126-10-2-1.77145284428761-2.09384600808989	chr15	53265711	53266253	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-88244	NM_010162	14042	Mm.309395	NM_010162		Ext1	AA409028	exostoses (multiple) 1	protein-coding
common_peak1-18610-18-16-0.225456309978012-0.397739447719379	chr8	107254459	107255249	+	0	NA	Intergenic	Intergenic	-3049	NM_001190330	102022	Mm.212983	NM_133960	ENSMUSG00000055730	Ces2a	9130231C15Rik|AI266984|Ces6	carboxylesterase 2A	protein-coding
common_peak2-23688-6-6--0.241956811677302-0.947717972411649	chr15	86079632	86080050	+	0	NA	intron (NM_145476, intron 4 of 12)	L1M4c|LINE|L1	34952	NM_145476	223754	Mm.28904	NM_145476	ENSMUSG00000051864	Tbc1d22a	BC023106|D15Ertd781e	TBC1 domain family, member 22a	protein-coding
common_peak1-9755-33-21-0.871905943888232-1.60774463804084	chr12	54162094	54163350	+	0	NA	intron (NM_198111, intron 9 of 13)	intron (NM_198111, intron 9 of 13)	-186942	NM_013780	27386	Mm.247044	NM_013780	ENSMUSG00000021010	Npas3	4930423H22Rik|bHLHe12	neuronal PAS domain protein 3	protein-coding
unique_peak2-39571-0-7--3.84013093047421-1.80617997398389	chr9	72838026	72838424	+	0	NA	intron (NM_001286544, intron 1 of 8)	intron (NM_001286544, intron 1 of 8)	4914	NM_028181	72278	Mm.268475	NM_028181	ENSMUSG00000034563	Ccpg1	1700030B06Rik|1810073J13Rik|9430028F23Rik|AI426686|AI875170|CPR8|D9Ertd392e	cell cycle progression 1	protein-coding
common_peak2-20869-52-40-0.750707985647615-1.9967981614991	chr11	99105654	99107307	+	0	NA	Intergenic	Intergenic	-1099	NM_172946	268481	Mm.133193	NM_172946	ENSMUSG00000035849	Krt222	6330509G02Rik	keratin 222	protein-coding
unique_peak2-37124-7-7--0.200909169701811-0.97990265578305	chr4	11014346	11014733	+	0	NA	Intergenic	Intergenic	-11187	NM_001085493	76947	Mm.275265	NM_001085493	ENSMUSG00000050323	Ndufaf6	2310030N02Rik	NADH dehydrogenase (ubiquinone) complex I, assembly factor 6	protein-coding
common_peak1-16508-20-18-0.240147271147608-0.388034239052786	chr5	139796282	139797093	+	0	NA	intron (NM_172723, intron 1 of 10)	intron (NM_172723, intron 1 of 10)	4731	NM_172723	231821	Mm.297819	NM_172723	ENSMUSG00000056413	Adap1	4930431P11Rik|Centa1|GC1L|p42IP4	ArfGAP with dual PH domains 1	protein-coding
common_peak2-28956-52-55-0.300905068208095-0.644995680934529	chr5	100622960	100623763	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-16350	NR_040679	69571	Mm.396412	NR_040679		2310034O05Rik	-	RIKEN cDNA 2310034O05 gene	ncRNA
unique_peak2-39658-2-6--1.72480917832092-1.26211192963361	chr9	107296144	107296598	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-5840	NM_001174049	56808	Mm.273084	NM_020263	ENSMUSG00000010066	Cacna2d2	Cacna2d|a2d2|du|mKIAA0558|td|torpid	calcium channel, voltage-dependent, alpha 2/delta subunit 2	protein-coding
unique_peak2-37882-7-6--0.00826409175941478-0.97990265578305	chr5	139379867	139380239	+	0	NA	Intergenic	Intergenic	84019	NM_001195128	384244	Mm.485002	NM_001195128	ENSMUSG00000094504	Gm5294	EG384244	predicted gene 5294	protein-coding
common_peak1-8012-34-30-0.427872216614391-0.737357778720995	chr1	167270351	167271469	+	0	NA	intron (NM_028759, intron 14 of 18)	intron (NM_028759, intron 14 of 18)	45013	NM_001081126	240888	Mm.329929	NM_001081126		Gpr161	Gm208|Gm208Gpr|vl	G protein-coupled receptor 161	protein-coding
common_peak1-19266-18-41--1.07939827155041-1.90347783429882	chr9	113931378	113932252	+	0	NA	intron (NM_178624, intron 1 of 14)	B3A|SINE|B2	4054	NM_178624	72179	Mm.386808	NM_178624	ENSMUSG00000032507	Fbxl2	2810423A21Rik|Fbl3	F-box and leucine-rich repeat protein 2	protein-coding
unique_peak2-34743-3-11--1.99894559068043-1.95434855131066	chr15	53344340	53344821	+	0	NA	intron (NM_177225, intron 4 of 4)	intron (NM_177225, intron 4 of 4)	-166842	NM_010162	14042	Mm.309395	NM_010162		Ext1	AA409028	exostoses (multiple) 1	protein-coding
common_peak2-25252-11-7-0.508693584251613-1.21681515183528	chr18	65520631	65521017	+	0	NA	intron (NM_001037294, intron 3 of 12)	intron (NM_001037294, intron 3 of 12)	32718	NM_001037294	225638	Mm.296528	NM_001037294	ENSMUSG00000032845	Alpk2	Gm549|Hak	alpha-kinase 2	protein-coding
common_peak2-30269-14-19--0.422711934529718-0.403453972741636	chr7	16206674	16207454	+	0	NA	Intergenic	Intergenic	18062	NM_145707	246791	Mm.425362	NM_145707	ENSMUSG00000066772	Obox3	Ohx	oocyte specific homeobox 3	protein-coding
common_peak1-12343-14-32--1.14517795900081-1.66700866096458	chr17	56074476	56075265	+	0	NA	Intergenic	L1MB7|LINE|L1	9812	NM_146249	240120	Mm.441018	NM_146249		Zfp119b	-	zinc finger protein 119b	protein-coding
common_peak2-29349-13-21--0.680959587999529-0.607095980551316	chr5	149184557	149185475	+	0	NA	intron (NM_007513, intron 1 of 12)	L1MB8|LINE|L1	26464	NM_007513	11987	Mm.275489	NM_007513	ENSMUSG00000041313	Slc7a1	4831426K01Rik|AI447493|Atrc-1|Atrc1|Cat1|Rec-1|Rev-1|mCAT-1	solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	protein-coding
unique_peak1-2099-10-1-2.35641534500877-2.57096726280955	chr15	37720795	37721316	+	0	NA	intron (NM_134094, intron 1 of 6)	intron (NM_134094, intron 1 of 6)	700	NM_001170866	52589	Mm.283370	NM_134094	ENSMUSG00000051359	Ncald	AI848120|D030020D09Rik|D15Ertd412e	neurocalcin delta	protein-coding
unique_peak2-39446-8-19--1.31670567693979-1.30305656033811	chr9	48661848	48662779	+	0	NA	Intergenic	Intergenic	-18263	NM_001033324	235320	Mm.457803	NM_001033324	ENSMUSG00000066687	Zbtb16	AI467657|PLZF|Zfp145|lu	zinc finger and BTB domain containing 16	protein-coding
common_peak1-13519-30-27-0.362320487434269-0.581176766834141	chr2	130629050	130630352	+	0	NA	non-coding (NR_024097, exon 1 of 1)	non-coding (NR_024097, exon 1 of 1)	136	NR_024097	100043766	Mm.447040	NR_024097		Gm14057	OTTMUSG00000015563	Ppp1r14c pseudogene	pseudo
common_peak1-8751-23-42--0.704497250193017-1.12624088074372	chr11	4594142	4594968	+	0	NA	Intergenic	B1_Mur2|SINE|Alu	9792	NM_197979	66152	Mm.269736	NM_197979	ENSMUSG00000059534	Uqcr10	1110020P15Rik|AA960494|Ucrc	ubiquinol-cytochrome c reductase, complex III subunit X	protein-coding
unique_peak1-539-7-3-0.799090830298189-1.23214870625617	chr1	191193782	191194265	+	0	NA	intron (NM_001281848, intron 1 of 5)	intron (NM_001281848, intron 1 of 5)	-25952	NM_001281847	16526	Mm.33304	NM_010607	ENSMUSG00000037624	Kcnk2	A430027H14Rik|AI848635|TREK-1	potassium channel, subfamily K, member 2	protein-coding
common_peak1-17072-33-20-0.939020139746768-1.77675427888235	chr6	108305973	108307299	+	0	NA	intron (NM_010585, intron 10 of 61)	(TG)n|Simple_repeat|Simple_repeat	-133101	NR_106121	102465766		NR_106121		Mir7661	mmu-mir-7661	microRNA mir-7661	ncRNA
common_peak1-17676-12-12--0.0516637330534535-0.309718203022949	chr7	66109904	66110539	+	0	NA	Intergenic	Intergenic	196649	NM_009728	11982	Mm.135129	NM_009728	ENSMUSG00000025324	Atp10a	Atp10c|pfatp	ATPase, class V, type 10A	protein-coding
common_peak2-25647-34-24-0.738212337226542-1.3806499615138	chr19	10038866	10039863	+	0	NA	Intergenic	B4A|SINE|B4	-15726	NR_073181	14319	Mm.1776	NM_010239	ENSMUSG00000024661	Fth1	FHC|Fth|HFt|MFH	ferritin heavy chain 1	protein-coding
common_peak2-24704-12-19--0.673152109799724-0.546772548767014	chr17	46027069	46027705	+	0	NA	Intergenic	GA-rich|Low_complexity|Low_complexity	134725	NM_001110267	22339	Mm.282184	NM_009505	ENSMUSG00000023951	Vegfa	Vegf|Vpf	vascular endothelial growth factor A	protein-coding
common_peak1-11729-33-36-0.121884196896579-0.346766333527252	chr16	33251022	33251791	+	0	NA	promoter-TSS (NM_080557)	promoter-TSS (NM_080557)	-136	NM_080557	69150	Mm.28196	NM_080557	ENSMUSG00000022808	Snx4	1810036H14Rik|AI037066	sorting nexin 4	protein-coding
common_peak1-11472-8-10--0.454209200689727-1.078512453669	chr15	102005262	102005775	+	0	NA	Intergenic	RLTR25B|LTR|ERVK	13956	NM_144942	246277	Mm.296382	NM_144942	ENSMUSG00000023044	Csad	Csd	cysteine sulfinic acid decarboxylase	protein-coding
common_peak1-7485-27-23-0.40658345017408-0.622271369641148	chr1	7087882	7088858	+	0	NA	intron (NM_183028, intron 1 of 5)	ORR1A1|LTR|MaLR	9369	NM_183028	319263	Mm.21539	NM_183028	ENSMUSG00000051285	Pcmtd1	8430411F12Rik|A030012M09Rik	protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	protein-coding
common_peak2-21407-34-69--0.7472144899437-1.74156632662937	chr11	83302253	83303476	+	0	NA	intron (NM_027427, intron 7 of 15)	intron (NM_027427, intron 7 of 15)	16254	NM_027427	70439	Mm.181050	NM_027427	ENSMUSG00000020680	Taf15	2610111C21Rik|68kDa|TAFII68|Taf2n	TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor	protein-coding
unique_peak1-3649-20-1-3.48807478459119-5.43827864561946	chr19	38613644	38614708	+	0	NA	intron (NM_019588, intron 1 of 31)	intron (NM_019588, intron 1 of 31)	15489	NM_019588	74055	Mm.34031	NM_019588	ENSMUSG00000024998	Plce1	4933403A21Rik|PLCepsilon|Plce|mKIAA1516	phospholipase C, epsilon 1	protein-coding
common_peak2-28097-85-93-0.400814396447013-1.26597998525012	chr4	86856601	86857545	+	0	NA	intron (NM_001110240, intron 1 of 9)	intron (NM_001110240, intron 1 of 9)	16794	NM_001110240	76376	Mm.490487	NM_172426	ENSMUSG00000037996	Slc24a2	2810021B17Rik|6330417K15Rik|AI847460|Nckx2	solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	protein-coding
common_peak2-20261-16-22--0.405298313788951-0.440610794044987	chr1	186704946	186705886	+	0	NA	intron (NM_178692, intron 1 of 1)	PB1D10|SINE|Alu	1499	NM_178692	226777	Mm.169542	NM_178692	ENSMUSG00000039349	C130074G19Rik	-	RIKEN cDNA C130074G19 gene	protein-coding
common_peak2-29215-29-36--0.0971632850138393-0.304088508634286	chr5	137338362	137339726	+	0	NA	intron (NM_024474, intron 1 of 12)	ID_B1|SINE|B4	19933	NM_024474	140709	Mm.295020	NM_024474	ENSMUSG00000004415	Col26a1	9430032K24Rik|BC002218|Col26a|Emid2|Emu2	collagen, type XXVI, alpha 1	protein-coding
unique_peak1-4401-15-4-1.69023665566829-1.97518968347063	chr2	165914497	165915175	+	0	NA	exon (NM_001252578, exon 6 of 21)	exon (NM_001252578, exon 6 of 21)	65949	NM_001252578	72043	Mm.1011	NM_028072	ENSMUSG00000006800	Sulf2	2010004N24Rik|AU020235|MSulf-2|mKIAA1247	sulfatase 2	protein-coding
common_peak1-15713-16-14-0.211373046659543-0.364171515310935	chr4	141277633	141278313	+	0	NA	intron (NM_001017966, intron 1 of 9)	intron (NM_001017966, intron 1 of 9)	1361	NM_001017966	68817	Mm.393721	NM_001017966		Ddi2	1110056G13Rik|1700027M01Rik|9130022E05Rik|AI604911|AU040698	DNA-damage inducible protein 2	protein-coding
unique_peak2-39029-7-11--0.785871670422967-1.21681515183528	chr8	61607034	61607590	+	0	NA	Intergenic	Lx9|LINE|L1	216760	NM_173411	234290	Mm.39244	NM_173411	ENSMUSG00000049946	BC030500	-	cDNA sequence BC030500	protein-coding
common_peak2-26153-8-12--0.695217300193522-0.475924844171029	chr2	16024923	16025451	+	0	NA	Intergenic	L1Md_A|LINE|L1	-252744	NM_026162	67448	Mm.313938	NM_026162	ENSMUSG00000026748	Plxdc2	1200007L24Rik|5430431D22Rik|AI646728|AU022916|AV231634|Tem7r	plexin domain containing 2	protein-coding
common_peak1-14340-65-72-0.30234138059711-0.736222529913312	chr2	164558180	164560049	+	0	NA	intron (NM_027961, intron 2 of 3)	ID_B1|SINE|B4	9653	NM_027961	71856	Mm.330770	NM_027961	ENSMUSG00000076434	Wfdc3	1700015L13Rik|1700127F16Rik	WAP four-disulfide core domain 3	protein-coding
unique_peak2-32455-9-6-0.382258484346616-1.11707584880836	chr1	10872557	10873018	+	0	NA	Intergenic	L1Md_T|LINE|L1	-110759	NM_029525	109294	Mm.123247	NM_029525	ENSMUSG00000048960	Prex2	6230420N16Rik|AI316880|AI553603|C030045D06Rik|D430013K02|Depdc2|P-Rex2	phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2	protein-coding
common_peak2-30706-11-9-0.186765489364251-0.344532117358383	chr7	112422563	112423105	+	0	NA	Intergenic	Intergenic	-13775	NM_001011533	259161	Mm.377867	NM_001011533	ENSMUSG00000073909	Olfr688	MOR40-16|MOR40-5|Olfr688-ps1	olfactory receptor 688	protein-coding
unique_peak2-32747-7-11--0.785871670422967-1.21681515183528	chr1	167284373	167284930	+	0	NA	intron (NM_028759, intron 11 of 18)	intron (NM_028759, intron 11 of 18)	58754	NM_001081126	240888	Mm.329929	NM_001081126		Gpr161	Gm208|Gm208Gpr|vl	G protein-coupled receptor 161	protein-coding
common_peak1-18145-68-71-0.400035777855984-1.05715192273056	chr8	11322397	11324371	+	0	NA	intron (NM_009932, intron 3 of 47)	intron (NM_009932, intron 3 of 47)	10555	NM_009932	12827	Mm.181021	NM_009932	ENSMUSG00000031503	Col4a2	Col4a-2	collagen, type IV, alpha 2	protein-coding
common_peak1-13458-20-8-1.31814978314888-1.77631109801764	chr19	59878607	59879337	+	0	NA	Intergenic	Intergenic	140295	NM_001033172	74998	Mm.24167	NM_001033172	ENSMUSG00000040022	Rab11fip2	4930470G04Rik|A830046J09Rik|AW558126|Nrip11	RAB11 family interacting protein 2 (class I)	protein-coding
common_peak1-11076-56-86--0.207347670409485-0.464354817761423	chr15	58822493	58824408	+	0	NA	intron (NM_001146180, intron 3 of 13)	intron (NM_001146180, intron 3 of 13)	58085	NM_023172	66218	Mm.322294	NM_023172	ENSMUSG00000022354	Ndufb9	1190008J14Rik	NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9	protein-coding
common_peak2-30194-13-14--0.12841856497075-0.301029995663977	chr7	41598678	41599211	+	0	NA	Intergenic	Intergenic	-2285732	NM_001013810	434171	Mm.60990	NM_001013810	ENSMUSG00000060565	Gm5591	EG434171	predicted gene 5591	protein-coding
unique_peak1-3344-41-1-4.70114870484866-14.1011725460227	chr19	5406515	5407547	+	0	NA	non-coding (NR_027938, exon 1 of 4)	non-coding (NR_027938, exon 1 of 4)	216	NR_027938	74931	Mm.388511	NR_015545	ENSMUSG00000086938	4930481A15Rik	-	RIKEN cDNA 4930481A15 gene	ncRNA
unique_peak2-34927-1-8--2.79698201165906-2.05605744720049	chr15	85678707	85679094	+	0	NA	intron (NM_001033337, intron 9 of 13)	Lx5|LINE|L1	-11237	NM_001168672	29870	Mm.20858	NM_013882	ENSMUSG00000022385	Gtse1	B99|Gtse-1	G two S phase expressed protein 1	protein-coding
common_peak1-10171-17-13-0.410941416147434-0.546772548767014	chr13	38658455	38659070	+	0	NA	Intergenic	Intergenic	-38069	NM_001289598	105245	Mm.28622	NM_145367	ENSMUSG00000038991	Txndc5	AL022641|ERp46|PC-TRP	thioredoxin domain containing 5	protein-coding
common_peak2-23467-52-45-0.584698034208686-1.40644682976107	chr15	73089943	73091243	+	0	NA	intron (NM_007982, intron 20 of 31)	intron (NM_007982, intron 20 of 31)	-75216	NM_153178	239528	Mm.23095	NM_153178		Ago2	1110029L17Rik|2310051F07Rik|AI225898|AL022874|AW546247|ENSMUSG00000072493|Eif2c2|Gerp95|Gm10365|mKIAA4215	argonaute RISC catalytic subunit 2	protein-coding
unique_peak2-35569-6-8--0.60452689106201-1.03789460276074	chr17	70003724	70004158	+	0	NA	Intergenic	Intergenic	215275	NM_001145192	320722	Mm.400254	NM_001145192	ENSMUSG00000091636	A330050F15Rik	-	RIKEN cDNA A330050F15 gene	protein-coding
common_peak1-11041-32-62--0.698187904280257-1.44840522860438	chr15	44427231	44428597	+	0	NA	intron (NM_138674, intron 76 of 76)	intron (NM_138674, intron 76 of 76)	-23273	NM_019480	55960	Mm.287896	NM_019480	ENSMUSG00000022339	Ebag9	AI835379|Rcas1	estrogen receptor-binding fragment-associated gene 9	protein-coding
common_peak1-9093-15-16--0.075298090694683-0.301029995663976	chr11	69991150	69991918	+	0	NA	Intergenic	Intergenic	11409	NM_010796	17312	Mm.252405	NM_010796	ENSMUSG00000000318	Clec10a	CD301a|M-ASGP-BP-1|Mgl|Mgl1	C-type lectin domain family 10, member A	protein-coding
common_peak2-30444-3-4--0.73591118484664-0.864171920961574	chr7	45018416	45018674	+	0	NA	Intergenic	Intergenic	1501359	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak1-16298-21-19-0.247561170378873-0.427564438475253	chr5	113872729	113873919	+	0	NA	Intergenic	Intergenic	-46143	NM_177292	320916	Mm.102783	NM_177292	ENSMUSG00000063430	Wscd2	4933413A10Rik|C530024P05Rik|Gm450	WSC domain containing 2	protein-coding
common_peak1-13354-55-55-0.397264949095098-0.910921989990114	chr19	45047124	45048781	+	0	NA	intron (NR_040294, intron 1 of 2)	intron (NR_040294, intron 1 of 2)	11088	NR_040294	73894	Mm.491408	NR_040294		4930414N06Rik	-	RIKEN cDNA 4930414N06 gene	ncRNA
common_peak1-11786-69-93-0.0405535955810947-0.319317430124637	chr16	48993186	48994483	+	0	NA	promoter-TSS (NM_172616)	promoter-TSS (NM_172616)	391	NM_001110017	224170	Mm.275138	NM_027341	ENSMUSG00000064061	Dzip3	2310047C04Rik|2A-HUB|6430549P11Rik|A230104G20	DAZ interacting protein 3, zinc finger	protein-coding
unique_peak2-33999-1-7--2.62705701021674-1.80617997398389	chr12	91384500	91384877	+	0	NA	intron (NM_172544, intron 15 of 19)	Lx|LINE|L1	333765	NM_001252074	18191	Mm.425766	NM_172544	ENSMUSG00000066392	Nrxn3	-	neurexin III	protein-coding
common_peak1-15298-29-10-1.65285846197781-3.49519823291232	chr4	43383183	43384642	+	0	NA	exon (NM_177195, exon 27 of 29)	exon (NM_177195, exon 27 of 29)	-10942	NM_001037709	100213	Mm.235730	NM_199057	ENSMUSG00000035969	Rusc2	AI840675|mKIAA0375	RUN and SH3 domain containing 2	protein-coding
common_peak2-20525-6-10--0.894033508256995-1.21398586181642	chr10	62221777	62222309	+	0	NA	intron (NM_026201, intron 16 of 24)	B3|SINE|B2	33073	NM_026201	67500	Mm.196371	NM_026201	ENSMUSG00000020074	Ccar1	2610511G16Rik|9430036H15Rik|Carp1	cell division cycle and apoptosis regulator 1	protein-coding
common_peak2-25291-7-5-0.214128329577033-1.01466476204226	chr18	70051444	70051838	+	0	NA	Intergenic	Intergenic	-33572	NM_201362	381175	Mm.266831	NM_201362	ENSMUSG00000038903	Ccdc68	BC046343	coiled-coil domain containing 68	protein-coding
unique_peak2-34038-7-11--0.785871670422967-1.21681515183528	chr12	112693148	112693671	+	0	NA	TTS (NM_009396)	TTS (NM_009396)	12537	NM_009396	21928	Mm.255332	NM_009396	ENSMUSG00000021281	Tnfaip2	B94|Exoc3l3|M-sec|Tnfip2|tnfb94	tumor necrosis factor, alpha-induced protein 2	protein-coding
common_peak1-18202-18-12-0.612479433087259-0.739965416525508	chr8	23036008	23036871	+	0	NA	Intergenic	Intergenic	6743	NM_139222	246082	Mm.390015	NM_139222	ENSMUSG00000048500	Defb15	BD-15	defensin beta 15	protein-coding
unique_peak1-1564-7-3-0.799090830298189-1.23214870625617	chr13	30085420	30085947	+	0	NA	Intergenic	B4|SINE|B4	-7751	NM_010093	13557	Mm.268356	NM_010093	ENSMUSG00000016477	E2f3	E2F3b|E2f3a	E2F transcription factor 3	protein-coding
unique_peak2-38475-6-39--2.75652998450706-6.173243856988	chr7	29615725	29616946	+	0	NA	intron (NM_016772, intron 7 of 9)	intron (NM_016772, intron 7 of 9)	-2478	NM_010706	16855	Mm.210336	NM_010706	ENSMUSG00000053964	Lgals4	gal-4	lectin, galactose binding, soluble 4	protein-coding
common_peak1-18698-15-11-0.4272022498345-0.503257505534083	chr8	121631336	121632019	+	0	NA	intron (NM_019707, intron 7 of 13)	intron (NM_019707, intron 7 of 13)	-236761	NM_024219	68196	Mm.358714	NM_024219	ENSMUSG00000031839	Hsbp1	0610007A03Rik|AA408769|Hsp25	heat shock factor binding protein 1	protein-coding
common_peak1-16377-23-18-0.473839991065495-0.618644178587689	chr5	122987893	122988876	+	0	NA	Intergenic	Intergenic	-36150	NR_027838	11938	Mm.227583	NM_009722	ENSMUSG00000029467	Atp2a2	9530097L16Rik|D5Wsu150e|SERCA2|SERCA2B|mKIAA4195	ATPase, Ca++ transporting, cardiac muscle, slow twitch 2	protein-coding
unique_peak1-2783-7-1-1.79909083029819-1.80617997398389	chr17	12036618	12037092	+	0	NA	intron (NM_016694, intron 8 of 11)	intron (NM_016694, intron 8 of 11)	39200	NR_045808	52027	Mm.442257	NR_045808		D17Ertd648e	-	DNA segment, Chr 17, ERATO Doi 648, expressed	ncRNA
unique_peak2-36784-2-4--1.23938235115068-0.931118710592187	chr3	79218697	79219126	+	0	NA	intron (NM_001142953, intron 2 of 4)	Lx8|LINE|L1	69613	NM_001142953	100233207	Mm.373801	NM_001142953	ENSMUSG00000091685	Gm17359	-	predicted gene, 17359	protein-coding
common_peak1-18581-17-37--1.02963117523855-1.57996244908225	chr8	106058337	106059203	+	0	NA	Intergenic	MLT1D|LTR|MaLR	-68929	NR_045730	71058	Mm.67707	NR_045730		4933400L20Rik	-	RIKEN cDNA 4933400L20 gene	ncRNA
common_peak2-21921-15-19--0.309763344331706-0.356936432242222	chr12	17220935	17221563	+	0	NA	Intergenic	B3A|SINE|B2	-37555	NM_201531	382571	Mm.40173	NM_201531	ENSMUSG00000051726	Kcnf1	Gm1182|Kv5.1	potassium voltage-gated channel, subfamily F, member 1	protein-coding
unique_peak2-34102-5-10--1.16381195464315-1.33892459842472	chr13	14062779	14063324	+	0	NA	exon (NM_178640, exon 3 of 12)	exon (NM_178640, exon 3 of 12)	16110	NM_178640	97884	Mm.21686	NM_178640	ENSMUSG00000039242	B3galnt2	A930105D20Rik|C80633|D230016N13Rik	UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	protein-coding
unique_peak1-6138-7-0-2.79909083029819-2.40823996531185	chr6	134999667	135000032	+	0	NA	Intergenic	ORR1B1|LTR|MaLR	-15831	NM_181444	232431	Mm.23575	NM_181444	ENSMUSG00000046733	Gprc5a	Rai3|Raig1	G protein-coupled receptor, family C, group 5, member A	protein-coding
common_peak2-28155-11-9-0.186765489364251-0.344532117358383	chr4	106858956	106859448	+	0	NA	intron (NM_029565, intron 2 of 7)	intron (NM_029565, intron 2 of 7)	7967	NM_029565	56374	Mm.291192	NM_029565	ENSMUSG00000028618	Tmem59	1110001M20Rik|3110046P06Rik|AI256529|D4Ertd20e|MTDCF1|ORF18	transmembrane protein 59	protein-coding
common_peak2-29956-44-44-0.33003973823886-0.665385344403438	chr6	117916515	117918084	+	0	NA	Intergenic	B1F1|SINE|Alu	-29946	NM_001173372	108017	Mm.250392	NM_033648		Fxyd4	0610008I02Rik|AI267073|Chif	FXYD domain-containing ion transport regulator 4	protein-coding
common_peak2-32031-61-56-0.549859315584599-1.44715333719953	chr9	77749975	77751011	+	0	NA	Intergenic	Intergenic	-14679	NM_134255	68801	Mm.430736	NM_134255	ENSMUSG00000032349	Elovl5	1110059L23Rik|AI747313|AU043003|HELO1	ELOVL family member 5, elongation of long chain fatty acids (yeast)	protein-coding
common_peak1-14690-128-361--0.83483988500513-10.0423284878689	chr3	65956997	65959580	+	0	NA	intron (NM_145820, intron 9 of 13)	L1Md_A|LINE|L1	-65521	NM_008987	19288	Mm.276776	NM_008987	ENSMUSG00000027832	Ptx3	AI607804|TSG-14	pentraxin related gene	protein-coding
common_peak1-14314-59-47-0.740401500151422-2.18456516591729	chr2	163491508	163493667	+	0	NA	intron (NM_001039390, intron 2 of 4)	intron (NM_001039390, intron 2 of 4)	8393	NM_001164053	18769	Mm.10091	NM_011106	ENSMUSG00000035268	Pkig	PKIgamma	protein kinase inhibitor, gamma	protein-coding
common_peak2-22778-16-30--0.835932668118813-1.0921097739129	chr14	45317899	45319075	+	0	NA	Intergenic	Lx2|LINE|L1	26175	NM_001162954	666744	Mm.387002	NM_001162954	ENSMUSG00000091923	Gm8267	EG666744	predicted gene 8267	protein-coding
unique_peak2-35175-5-6--0.511735258063458-0.947717972411649	chr16	43459273	43459681	+	0	NA	intron (NM_001285805, intron 4 of 10)	MIRb|SINE|MIR	-39168	NR_046026	626693	Mm.447083	NR_046026	ENSMUSG00000085499	Gm15713	OTTMUSG00000025617	predicted gene 15713	ncRNA
common_peak2-25388-6-6--0.241956811677302-0.947717972411649	chr18	90578887	90579285	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-100460	NM_198295	67988	Mm.268041	NM_198295	ENSMUSG00000024614	Tmx3	6430411B10Rik|A730024F05Rik|AV259382|Txndc10|mKIAA1830	thioredoxin-related transmembrane protein 3	protein-coding
common_peak1-16373-34-41--0.0102488957774947-0.30364629078125	chr5	122778764	122780112	+	0	NA	intron (NM_144912, intron 10 of 10)	B3A|SINE|B2	24766	NM_144912	231724	Mm.255587	NM_144912	ENSMUSG00000038569	Rad9b	A630082N15Rik|BC021784	RAD9 homolog B	protein-coding
common_peak1-8935-121-94-0.997510173547051-7.48834261028505	chr11	53299482	53301668	+	0	NA	Intergenic	RMER1A|Other|Other	-6878	NM_183173	237761	Mm.145208	NM_183173	ENSMUSG00000044352	Sowaha	A830006N08Rik|Ankrd43	sosondowah ankyrin repeat domain family member A	protein-coding
common_peak2-22326-9-14--0.717277189204299-0.53895475198017	chr13	23537410	23537872	+	0	NA	Intergenic	CpG	-14755	NR_015492	320842	Mm.487476	NR_015492	ENSMUSG00000085024	C230035I16Rik	-	RIKEN cDNA C230035I16 gene	ncRNA
common_peak2-32170-11-11--0.0762689164695427-0.301029995663976	chr9	110781548	110781922	+	0	NA	promoter-TSS (NM_001146059)	promoter-TSS (NM_001146059)	852	NM_146260	20776	Mm.390229	NM_146260	ENSMUSG00000049555	Tmie	5131400L21Rik|Mm.87012|sr	transmembrane inner ear	protein-coding
common_peak2-20295-13-11-0.193509529916613-0.379391706698377	chr1	193412653	193413060	+	0	NA	intron (NM_178632, intron 4 of 19)	RMER15|LTR|ERVL	13243	NM_178632	77065	Mm.338175	NM_178632	ENSMUSG00000037461	Ints7	5930412E23Rik	integrator complex subunit 7	protein-coding
unique_peak2-39917-6-10--0.894033508256995-1.21398586181642	chrX	101332974	101333447	+	0	NA	intron (NM_001077354, intron 1 of 4)	L1Md_F2|LINE|L1	-21597	NR_030430	751535		NR_030430	miRBase:MI0004258	Mir672	Mirn672|mmu-mir-672	microRNA 672	ncRNA
common_peak1-19073-8-15--0.994777582052429-0.771068449301683	chr9	70229526	70230032	+	0	NA	intron (NM_181072, intron 25 of 27)	Charlie10|DNA|MER1_type	23781	NR_049200	100885839		NR_049200	miRBase:MI0019195	Mir5626	mmu-mir-5626	microRNA mir-5626	ncRNA
common_peak1-8783-16-14-0.211373046659543-0.364171515310935	chr11	8706192	8706998	+	0	NA	Intergenic	Intergenic	-142057	NM_001083587	319939	Mm.337820	NM_001083587	ENSMUSG00000020422	Tns3	BC023928|F830010I22Rik|TEM6|Tens1	tensin 3	protein-coding
unique_peak1-1273-16-9-0.796335547380699-0.844317084070804	chr11	117912453	117913171	+	0	NA	intron (NM_001167746, intron 60 of 80)	RMER13B|LTR|ERVK	49228	NR_105898	102466768		NR_105898		Mir6933	mmu-mir-6933	microRNA mir-6933	ncRNA
common_peak1-11681-9-20--1.20270401637454-1.23014042908325	chr16	30066223	30066716	+	0	NA	intron (NM_008235, intron 3 of 3)	CpG	1026	NM_008235	15205	Mm.390859	NM_008235	ENSMUSG00000022528	Hes1	Hry|bHLHb39	hairy and enhancer of split 1 (Drosophila)	protein-coding
unique_peak2-33926-5-10--1.16381195464315-1.33892459842472	chr12	69884387	69884902	+	0	NA	Intergenic	Intergenic	375529	NM_009093	20090	Mm.379006	NM_009093	ENSMUSG00000034892	Rps29	-	ribosomal protein S29	protein-coding
common_peak2-31799-591-645-0.996226412503697-47.7682555274229	chr9	35305137	35305680	+	0	NA	intron (NM_021339, intron 17 of 18)	intron (NM_021339, intron 17 of 18)	45747	NM_021339	57810	Mm.80509	NM_021339	ENSMUSG00000038119	Cdon	CDO|Cd0|Orcam	cell adhesion molecule-related/down-regulated by oncogenes	protein-coding
common_peak1-10115-10-14--0.550475250599749-0.446472590016315	chr13	30135972	30136492	+	0	NA	Intergenic	Intergenic	-58300	NM_010093	13557	Mm.268356	NM_010093	ENSMUSG00000016477	E2f3	E2F3b|E2f3a	E2F transcription factor 3	protein-coding
common_peak1-13538-17-20--0.174021084573723-0.306598483909156	chr2	180272841	180273627	+	0	NA	intron (NM_018766, intron 1 of 3)	intron (NM_018766, intron 1 of 3)	38553	NM_018766	18216	Mm.301712	NM_018766	ENSMUSG00000027568	Ntsr1	NT-1R|NTR-1|NTR1	neurotensin receptor 1	protein-coding
unique_peak2-33835-2-12--2.61789397440441-2.55640854263862	chr12	9574230	9574927	+	0	NA	intron (NR_045488, intron 2 of 3)	intron (NR_045488, intron 2 of 3)	2813	NR_045488	69420	Mm.396193	NR_045488		1700022H16Rik	-	RIKEN cDNA 1700022H16 gene	ncRNA
unique_peak1-7143-10-6-0.549060422951165-1.21398586181642	chr9	56907261	56907894	+	0	NA	intron (NM_019651, intron 11 of 12)	intron (NM_019651, intron 11 of 12)	12196	NR_045886	100038566	Mm.361900	NR_045886		Gm10658	ENSMUSG00000074284	predicted gene 10658	ncRNA
unique_peak1-371-15-2-2.4272022498345-3.53487848679804	chr1	143725015	143725794	+	0	NA	Intergenic	Intergenic	-1172425	NR_040604	75910	Mm.483845	NR_040604		4930590L20Rik	-	RIKEN cDNA 4930590L20 gene	ncRNA
common_peak2-26996-56-76--0.0311907152556579-0.302468067374185	chr2	168954396	168956524	+	0	NA	Intergenic	Intergenic	151691	NR_040326	75508	Mm.271256	NR_040326	ENSMUSG00000086348	1700017J07Rik	-	RIKEN cDNA 1700017J07 gene	ncRNA
unique_peak2-39233-5-8--0.874305337448166-1.10484139239135	chr8	111370975	111371247	+	0	NA	intron (NM_007496, intron 3 of 9)	intron (NM_007496, intron 3 of 9)	-89649	NR_037295	100526511		NR_037295		Mir3108	mmu-mir-3108	microRNA 3108	ncRNA
common_peak2-22516-11-13--0.298661337805991-0.337263207250336	chr13	54608687	54609211	+	0	NA	intron (NM_176987, intron 1 of 9)	L1MEf|LINE|L1	3783	NM_176987	319719	Mm.376151	NM_176987	ENSMUSG00000043183	Simc1	4732471D19Rik	SUMO-interacting motifs containing 1	protein-coding
unique_peak1-1850-12-3-1.64877598508764-2.36932189928148	chr14	48288613	48289172	+	0	NA	intron (NM_001293635, intron 3 of 40)	B1_Mus2|SINE|Alu	5461	NM_008477	16709	Mm.3110	NM_008477	ENSMUSG00000021843	Ktn1	-	kinectin 1	protein-coding
common_peak2-28417-14-13-0.0918612383000403-0.332077462497413	chr4	141569457	141570074	+	0	NA	Intergenic	Intergenic	-2199	NM_177868	329977	Mm.252019	NM_028429	ENSMUSG00000051435	Fhad1	2900090M10Rik|B230311F11	forkhead-associated (FHA) phosphopeptide binding domain 1	protein-coding
common_peak1-8465-24-54--0.988149810756943-2.12244165266812	chr10	80102032	80103000	+	0	NA	exon (NM_001159591, exon 11 of 12)	exon (NM_001159591, exon 11 of 12)	10115	NM_001159591	103236	Mm.29873	NM_134002	ENSMUSG00000003345	Csnk1g2	2810429I12Rik|AI463719	casein kinase 1, gamma 2	protein-coding
common_peak2-19806-21-24--0.0743669245084888-0.301029995663979	chr1	88261726	88262859	+	0	NA	intron (NR_015507, intron 1 of 1)	intron (NR_015507, intron 1 of 1)	6143	NR_015507	319336	Mm.389155	NR_015507	ENSMUSG00000073627	C130036L24Rik	ENSMUSG00000073627	RIKEN cDNA C130036L24 gene	ncRNA
unique_peak1-5556-7-0-2.79909083029819-2.40823996531185	chr5	144943423	144943820	+	0	NA	exon (NM_001081109, exon 12 of 14)	exon (NM_001081109, exon 12 of 14)	-7534	NM_010800	17341	Mm.386767	NM_010800	ENSMUSG00000052271	Bhlha15	1810009C13Rik|Bhlhb8|MIST-1|Mist1	basic helix-loop-helix family, member a15	protein-coding
common_peak2-27547-17-22--0.305265617851975-0.348739088570342	chr3	96238369	96239177	+	0	NA	intron (NM_001256180, intron 3 of 4)	B3|SINE|B2	17456	NM_001256181	329716	Mm.275223	NM_183223	ENSMUSG00000046317	BC107364	D730018G16	cDNA sequence BC107364	protein-coding
unique_peak2-38816-2-8--2.08737925770563-1.65811743852845	chr7	138909040	138909514	+	0	NA	Intergenic	Intergenic	205372	NM_009774	12237	Mm.927	NM_009774	ENSMUSG00000066979	Bub3	AU019800|AU021329|AU043350|AW146323|C78067	budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae)	protein-coding
common_peak1-11859-13-10-0.319040412000471-0.446472590016315	chr16	92163493	92164250	+	0	NA	Intergenic	Intergenic	105290	NM_080456	121022	Mm.217354	NM_080456	ENSMUSG00000039680	Mrps6	AW046321	mitochondrial ribosomal protein S6	protein-coding
unique_peak1-1615-17-5-1.63333383748388-2.19184853030482	chr13	41354358	41355206	+	0	NA	intron (NM_001135577, intron 1 of 1)	L1Md_T|LINE|L1	9569	NM_001135577	108934	Mm.38578	NM_001135577	ENSMUSG00000091264	Smim13	2900036K02Rik	small integral membrane protein 13	protein-coding
common_peak2-23336-10-7-0.356415345008769-1.12966497611638	chr15	38454281	38454688	+	0	NA	Intergenic	Intergenic	-5463	NM_018745	54375	Mm.250214	NM_018745	ENSMUSG00000037458	Azin1	1700085L02Rik|AI414949|Oazi|Oazin	antizyme inhibitor 1	protein-coding
unique_peak1-4277-11-2-1.92373108353046-2.32232533660526	chr2	137151220	137151853	+	0	NA	Intergenic	Lx7|LINE|L1	-209280	NM_013822	16449	Mm.22398	NM_013822	ENSMUSG00000027276	Jag1	ABE2|Gsfabe2|Htu|Ozz|Ser-1	jagged 1	protein-coding
unique_peak2-34894-2-16--3.00491709751366-3.53487848679804	chr15	81190178	81190845	+	0	NA	intron (NM_011399, intron 1 of 8)	intron (NM_011399, intron 1 of 8)	684	NM_011399	20524	Mm.222536	NM_011399	ENSMUSG00000022404	Slc25a17	34kDa|47kDa|PMP34|Pmp47	solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17	protein-coding
common_peak2-27821-57-53-0.511145537915461-1.2687005592157	chr3	145684299	145686001	+	0	NA	TTS (NM_001166064)	TTS (NM_001166064)	34316	NM_001166064	214804	Mm.268854	NM_001166064	ENSMUSG00000036863	Syde2	C430017H16Rik	synapse defective 1, Rho GTPase, homolog 2 (C. elegans)	protein-coding
unique_peak1-5384-9-3-1.18961340640422-1.57096726280955	chr5	100566914	100567364	+	0	NA	intron (NM_182841, intron 1 of 7)	intron (NM_182841, intron 1 of 7)	21688	NM_182841	231503	Mm.99790	NM_182841	ENSMUSG00000050640	Tmem150c	-	transmembrane protein 150C	protein-coding
unique_peak1-183-10-1-2.35641534500877-2.57096726280955	chr1	74816745	74817271	+	0	NA	Intergenic	Intergenic	-1458	NM_009526	22420	Mm.268282	NM_009526	ENSMUSG00000033227	Wnt6	AA409270|Wnt-6	wingless-type MMTV integration site family, member 6	protein-coding
common_peak2-23795-10-16--0.73104749624157-0.604422558181019	chr15	99817295	99818174	+	0	NA	intron (NM_001284521, intron 3 of 15)	intron (NM_001284521, intron 3 of 15)	-14016	NR_028124	70281	Mm.484037	NR_028124		2310068J16Rik	-	RIKEN cDNA 2310068J16 gene	ncRNA
unique_peak1-3883-11-5-0.923731083530457-1.477227296591	chr2	13793289	13793873	+	0	NA	Intergenic	Intergenic	-78434	NM_145838	241230	Mm.330004	NM_145838	ENSMUSG00000003418	St8sia6	1700007J08Rik|AI314453|AI875066|ST8SiaVI|Siat8f	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6	protein-coding
unique_peak1-5609-26-9-1.6059709972711-2.89150037906958	chr6	99810258	99811482	+	0	NA	Intergenic	Intergenic	-134484	NM_001170419	50501	Mm.87365	NM_015768	ENSMUSG00000030069	Prok2	Bv8|PK2|Prok1	prokineticin 2	protein-coding
unique_peak2-35991-8-8--0.164702583494742-1.00793137938329	chr19	29812615	29813046	+	0	NA	intron (NM_172836, intron 4 of 7)	intron (NM_172836, intron 4 of 7)	40399	NM_029993	77836	Mm.138437	NM_029993		Mlana	A930034P04Rik|Mart1	melan-A	protein-coding
unique_peak2-34453-5-6--0.511735258063458-0.947717972411649	chr14	25487616	25488100	+	0	NA	Intergenic	Intergenic	177955	NM_011297	20088	Mm.16775	NM_011297	ENSMUSG00000025290	Rps24	-	ribosomal protein S24	protein-coding
common_peak1-14648-10-8-0.186490343566457-1.078512453669	chr3	57335407	57335953	+	0	NA	intron (NM_133784, intron 2 of 6)	intron (NM_133784, intron 2 of 6)	44118	NM_133784	97064	Mm.405029	NM_133784	ENSMUSG00000027803	Wwtr1	2310058J06Rik|2610021I22Rik|C78399|Taz	WW domain containing transcription regulator 1	protein-coding
common_peak1-16816-37-66--0.540096118971953-1.0807309740853	chr6	47877693	47878955	+	0	NA	intron (NM_145576, intron 3 of 4)	B2_Mm2|SINE|B2	7757	NM_001145881	232784	Mm.196782	NM_145576	ENSMUSG00000052763	Zfp212	Znf212|mKIAA3011	Zinc finger protein 212	protein-coding
common_peak1-8520-35-27-0.6240153364049-1.10223211335955	chr10	85101924	85103333	+	0	NA	intron (NM_028709, intron 11 of 16)	intron (NM_028709, intron 11 of 16)	41472	NM_001017525	74007	Mm.36544	NM_028709	ENSMUSG00000020042	Btbd11	6330404E16Rik	BTB (POZ) domain containing 11	protein-coding
common_peak2-26213-19-6-1.59533240460408-2.21753093801298	chr2	26408787	26409191	+	0	NA	Intergenic	Intergenic	-27587	NM_178444	353156	Mm.268933	NM_178444	ENSMUSG00000026921	Egfl7	VE-statin|Zneu1	EGF-like domain 7	protein-coding
common_peak2-30323-24-30--0.160986407619158-0.316008636696545	chr7	24884124	24885231	+	0	NA	intron (NM_001289641, intron 3 of 4)	intron (NM_001289641, intron 3 of 4)	-12662	NM_021307	57745	Mm.82678	NM_021307	ENSMUSG00000052675	Zfp112	Znf112|Znf228	zinc finger protein 112	protein-coding
common_peak1-13646-13-13--0.0288828914198356-0.309074325783021	chr2	26315538	26316060	+	0	NA	exon (NM_008714, exon 34 of 34)	exon (NM_008714, exon 34 of 34)	9840	NR_105962	102465602		NR_105962		Mir6996	mmu-mir-6996	microRNA mir-6996	ncRNA
common_peak2-28590-27-73--1.21790741473371-3.87167123306878	chr5	17573820	17575444	+	0	NA	Intergenic	Intergenic	106244	NM_001081143	242851	Mm.332230	NM_001081143	ENSMUSG00000028777	Gnat3	Ggust|Gtn	guanine nucleotide binding protein, alpha transducing 3	protein-coding
unique_peak2-32839-2-6--1.72480917832092-1.26211192963361	chr1	192202227	192202653	+	0	NA	Intergenic	Intergenic	-207881	NM_008937	19130	Mm.132579	NM_008937	ENSMUSG00000010175	Prox1	A230003G05Rik	prospero homeobox 1	protein-coding
common_peak2-28485-11-10-0.0492619656143161-0.31137425193576	chr4	155624209	155624780	+	0	NA	Intergenic	Intergenic	-15528	NM_198305	231003	Mm.423038	NM_198305	ENSMUSG00000078484	Klhl17	AL022703|BC058738	kelch-like 17	protein-coding
common_peak2-26959-8-8--0.164702583494742-1.00793137938329	chr2	165601041	165601617	+	0	NA	Intergenic	Intergenic	82344	NM_001252585	228880	Mm.227598	NM_027230	ENSMUSG00000039671	Zmynd8	1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7	zinc finger, MYND-type containing 8	protein-coding
common_peak1-11380-39-13-1.80840632486155-5.13747647932512	chr15	97498461	97500313	+	0	NA	Intergenic	(TCTCC)n|Simple_repeat|Simple_repeat	36866	NM_028003	71919	Mm.12255	NM_028003	ENSMUSG00000022466	Rpap3	2310042P20Rik|D15Ertd682e	RNA polymerase II associated protein 3	protein-coding
common_peak1-11143-90-145--0.135519532937866-0.413544097719307	chr15	73422203	73424180	+	0	NA	intron (NM_001033219, intron 2 of 7)	MTD|LTR|MaLR	3765	NM_001168255	106068	Mm.212813	NM_001033219	ENSMUSG00000079020	Slc45a4	9330175B01Rik|AW552276	solute carrier family 45, member 4	protein-coding
unique_peak2-36035-3-6--1.22133801201688-1.08602067057793	chr19	43689332	43689744	+	0	NA	3' UTR (NM_008699, exon 2 of 2)	3' UTR (NM_008699, exon 2 of 2)	2723	NM_008699	18089	Mm.56994	NM_008699	ENSMUSG00000044220	Nkx2-3	Nkx-2.3|Nkx2.3|tinman	NK2 homeobox 3	protein-coding
common_peak2-20985-37-32-0.481598952127365-0.849650211186447	chr11	22287377	22288443	+	0	NA	Intergenic	RLTR13D3|LTR|ERVK	-101112	NM_001252515	216565	Mm.491265	NM_153078	ENSMUSG00000042302	Ehbp1	AF424697|Flj21950|NACSIN	EH domain binding protein 1	protein-coding
common_peak2-25843-22-25--0.0531556130536872-0.301029995663976	chr19	41801404	41802089	+	0	NA	intron (NM_015748, intron 2 of 36)	intron (NM_015748, intron 2 of 36)	16600	NM_015748	20562	Mm.40322	NM_015748	ENSMUSG00000025020	Slit1	Slil1|mKIAA0813	slit homolog 1 (Drosophila)	protein-coding
common_peak2-31113-21-31--0.430510734733764-0.49501414494053	chr8	33641493	33642481	+	0	NA	Intergenic	Intergenic	379620	NR_046039	666589	Mm.367675	NR_046039		Gm8179	EG666589	predicted gene 8179	ncRNA
unique_peak2-33248-4-9--1.34538860874061-1.36011389749466	chr10	127064185	127064689	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	-6233	NM_008512	16971	Mm.271854	NM_008512	ENSMUSG00000040249	Lrp1	A2mr|AI316852|CD91|Lrp|b2b1554Clo	low density lipoprotein receptor-related protein 1	protein-coding
unique_peak1-2639-15-2-2.4272022498345-3.53487848679804	chr16	45030910	45031695	+	0	NA	Intergenic	Intergenic	-62864	NM_026439	67896	Mm.181074	NM_026439	ENSMUSG00000022665	Ccdc80	2610001E17Rik|DRO1|Ssg1|Urb	coiled-coil domain containing 80	protein-coding
common_peak2-27336-12-10-0.189344366450341-0.386243247519795	chr3	69222586	69223088	+	0	NA	intron (NM_178726, intron 1 of 3)	intron (NM_178726, intron 1 of 3)	101997	NM_178726	242083	Mm.40577	NM_178726		Ppm1l	3222401G13|5930404J21Rik|AI481720|AW045850|PP2C|PP2Cepsilon|Pp2ce|Ppp2ce|mKIAA4175	protein phosphatase 1 (formerly 2C)-like	protein-coding
unique_peak2-39162-6-7--0.434601889619698-0.97990265578305	chr8	91545155	91545505	+	0	NA	Intergenic	Intergenic	-3304	NR_106190	102465899		NR_106190	miRBase:MI0026042	Mir8110	mmu-mir-8110	microRNA mir-8110	ncRNA
common_peak1-14021-43-56--0.0503268286410385-0.302986303577564	chr2	112454268	112455690	+	0	NA	intron (NM_001165935, intron 1 of 4)	intron (NM_001165935, intron 1 of 4)	55140	NM_001165935	74268	Mm.315125	NM_028844		Aven	1700013A01Rik|1700056A21Rik|mAven-L|mAven-S	apoptosis, caspase activation inhibitor	protein-coding
common_peak1-9499-19-23--0.18227517405947-0.320777457303847	chr11	110356916	110357715	+	0	NA	intron (NM_011943, intron 7 of 11)	intron (NM_011943, intron 7 of 11)	96879	NM_011943	26399	Mm.14487	NM_011943	ENSMUSG00000020623	Map2k6	MEK6|MKK6|Prkmk6|SAPKK3	mitogen-activated protein kinase kinase 6	protein-coding
unique_peak2-35145-7-12--0.901348887842903-1.31827279259406	chr16	31603807	31604273	+	0	NA	Intergenic	Intergenic	-59489	NM_001252435	13383	Mm.382	NM_007862	ENSMUSG00000022770	Dlg1	B130052P05Rik|Dlgh1|E-dlg/SAP97|SAP-97|SAP97|mKIAA4187	discs, large homolog 1 (Drosophila)	protein-coding
common_peak2-22993-20-25--0.212364933549899-0.342639663781856	chr14	57798234	57798929	+	0	NA	Intergenic	L1MA7|LINE|L1	-46133	NM_001010937	14623	Mm.25652	NM_008128	ENSMUSG00000040055	Gjb6	AA958971|Cx30|D14Bwg0506e	gap junction protein, beta 6	protein-coding
common_peak2-29353-11-55--2.29866133780599-7.25437742264732	chr5	149678122	149678957	+	0	NA	Intergenic	Intergenic	61684	NM_153572	231912	Mm.397405	NM_153572		Katnal1	-	katanin p60 subunit A-like 1	protein-coding
common_peak2-25728-13-7-0.778472030637769-0.817533494790411	chr19	24156156	24156685	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	-50911	NM_001114174	381217	Mm.426078	NM_001114174	ENSMUSG00000071604	Fam189a2	AI414343|AI666772|Gm967	family with sequence similarity 189, member A2	protein-coding
unique_peak2-34346-3-5--0.998945590680433-0.96108193396963	chr13	99384642	99385026	+	0	NA	Intergenic	Intergenic	22531	NM_026685	68344	Mm.28766	NM_026685	ENSMUSG00000046082	Tmem174	0610009B10Rik|AA986094	transmembrane protein 174	protein-coding
common_peak1-15546-75-109--0.0422927217813749-0.305051298328157	chr4	120825111	120826119	+	0	NA	intron (NM_001081013, intron 5 of 5)	intron (NM_001081013, intron 5 of 5)	35524	NM_001081013	109263	Mm.215745	NM_001081013	ENSMUSG00000049878	Rlf	9230110M18Rik|AI195322|MommeD8	rearranged L-myc fusion sequence	protein-coding
common_peak1-17560-18-12-0.612479433087259-0.739965416525508	chr7	31151197	31152042	+	0	NA	Intergenic	B3|SINE|B2	-3828	NM_175478	233067	Mm.23157	NM_175478	ENSMUSG00000036957	Lrfn3	A530045B06Rik|SALM4	leucine rich repeat and fibronectin type III domain containing 3	protein-coding
common_peak1-13427-23-14-0.814876908900562-1.09492971584134	chr19	54040535	54041595	+	0	NA	intron (NM_019658, intron 1 of 8)	L1_Rod|LINE|L1	21699	NM_019658	56392	Mm.228669	NM_019658	ENSMUSG00000024976	Shoc2	AU017287|Sur8|mKIAA0862	soc-2 (suppressor of clear) homolog (C. elegans)	protein-coding
common_peak1-11700-16-8-0.948338640825749-1.02063122982878	chr16	31506482	31507133	+	0	NA	Intergenic	Intergenic	77968	NM_001122683	71911	Mm.293470	NM_175177	ENSMUSG00000046598	Bdh1	2310032J20Rik|AI327223|Bdh	3-hydroxybutyrate dehydrogenase, type 1	protein-coding
common_peak1-16802-189-244-0.406025549104212-2.81342789445792	chr6	47453620	47455542	+	0	NA	intron (NM_012042, intron 7 of 21)	intron (NM_012042, intron 7 of 21)	50258	NM_012042	26965	Mm.87611	NM_012042	ENSMUSG00000029686	Cul1	-	cullin 1	protein-coding
common_peak2-29052-19-22--0.120874629395327-0.306080386793804	chr5	115559496	115560073	+	0	NA	TTS (NM_007383)	TTS (NM_007383)	493	NM_001271590	100502825	Mm.361657	NM_001271590		Gm13826	OTTMUSG00000014624	predicted gene 13826	protein-coding
common_peak1-10055-13-14--0.12841856497075-0.301029995663977	chr13	21179993	21180477	+	0	NA	Intergenic	Intergenic	-15067	NM_146535	258528	Mm.377554	NM_146535	ENSMUSG00000042869	Olfr1370	MOR256-14	olfactory receptor 1370	protein-coding
unique_peak2-35545-4-10--1.48289213249054-1.5150158574804	chr17	57249462	57249990	+	0	NA	Intergenic	Intergenic	-4361	NR_033508	100169874	Mm.76700	NR_033508	ENSMUSG00000079414	Gm11110	ENSMUSG00000079414	predicted gene 11110	ncRNA
common_peak2-29393-41-45-0.177586748791647-0.410818340144418	chr6	72957443	72959026	+	0	NA	Intergenic	Intergenic	-49492	NM_001190327	19240	Mm.3532	NM_025284	ENSMUSG00000079523	Tmsb10	Ptmb10|Tb10	thymosin, beta 10	protein-coding
unique_peak2-38963-4-7--1.02346051385325-1.09384600808989	chr8	33663043	33663481	+	0	NA	Intergenic	L3|LINE|CR1	397236	NM_001177589	100042715	Mm.291093	NM_001177589		Gm3985	-	predicted gene 3985	protein-coding
common_peak2-24194-36-84--0.930069849969947-2.90184995680294	chr16	57548835	57549768	+	0	NA	promoter-TSS (NM_001177871)	promoter-TSS (NM_001177871)	-54	NM_001177871	78749	Mm.328360	NM_001040397	ENSMUSG00000043336	Filip1l	4631422O05Rik|Doc1	filamin A interacting protein 1-like	protein-coding
common_peak2-30844-40-47-0.0740131820299421-0.336492456843107	chr7	133123456	133125141	+	0	NA	intron (NM_001101488, intron 2 of 6)	intron (NM_001101488, intron 2 of 6)	101627	NM_001101488	269994	Mm.39599	NM_001101488	ENSMUSG00000046182	Gsg1l	AI852434|C230098I05Rik|G630023A01Rik|Gm637|g1l	GSG1-like	protein-coding
unique_peak2-35131-0-6--3.64748585253182-1.56314192529759	chr16	30500146	30500493	+	0	NA	Intergenic	B1_Mur2|SINE|Alu	50345	NM_172614	224090	Mm.241459	NM_172614		Tmem44	1700007N03Rik|9330161C17Rik|B230220N21	transmembrane protein 44	protein-coding
unique_peak2-38661-2-32--3.96184837562177-7.23262596636762	chr7	98059834	98060216	+	0	NA	Intergenic	Lx8|LINE|L1	-179271	NM_011807	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
unique_peak2-36647-3-9--1.73591118484664-1.57096726280955	chr3	10342203	10342532	+	0	NA	intron (NM_025512, intron 6 of 7)	intron (NM_025512, intron 6 of 7)	-6711	NM_001010834	241877	Mm.442146	NM_001010834	ENSMUSG00000058921	Slc10a5	Gm405|mP5	solute carrier family 10 (sodium/bile acid cotransporter family), member 5	protein-coding
common_peak1-15554-47-58-0.0521983754047062-0.317454636273721	chr4	123664421	123665681	+	0	NA	Intergenic	B4|SINE|B4	70375	NM_017475	54170	Mm.220922	NM_017475	ENSMUSG00000028646	Rragc	AU041672|Gtr2|RAGC|TIB929|YGR163W	Ras-related GTP binding C	protein-coding
common_peak2-24505-25-19-0.539921810457743-0.756750750680359	chr17	26200761	26201412	+	0	NA	intron (NM_001162868, intron 1 of 13)	intron (NM_001162868, intron 1 of 13)	5036	NM_001162868	215445	Mm.41191	NM_153140	ENSMUSG00000037098	Rab11fip3	Cart1|D030060O14Rik|Rab11-FIP3|mKIAA0665	RAB11 family interacting protein 3 (class II)	protein-coding
unique_peak2-35965-6-10--0.894033508256995-1.21398586181642	chr19	17352627	17353138	+	0	NA	Intergenic	Intergenic	61113	NM_001136484	14537	Mm.244825	NM_010265	ENSMUSG00000038843	Gcnt1	5630400D21Rik|B130048E03|C2 GlcNAcT|C2GNT|IGnT	glucosaminyl (N-acetyl) transferase 1, core 2	protein-coding
common_peak2-25287-6-11--1.01956439034085-1.32595962126035	chr18	69920316	69920710	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	-164700	NM_201362	381175	Mm.266831	NM_201362	ENSMUSG00000038903	Ccdc68	BC046343	coiled-coil domain containing 68	protein-coding
common_peak2-24649-7-4-0.477162735410827-1.09384600808989	chr17	35551033	35551407	+	0	NA	Intergenic	MERVL_2A-int|LTR|ERVL	-10572	NM_023124	15019	Mm.486287	NM_023124		H2-Q8	H-2Q8|MMS10-T|Ms10t|Qa-2|Qa-8|Qa8	histocompatibility 2, Q region locus 8	protein-coding
unique_peak1-597-9-0-3.18961340640422-3.01029995663981	chr10	18604463	18604865	+	0	NA	Intergenic	RLTR41|LTR|ERV1	39787	NM_022032	64058	Mm.28209	NM_022032	ENSMUSG00000019851	Perp	1110017A08Rik|KCP1|KRTCAP1|PIGPC1|THW	PERP, TP53 apoptosis effector	protein-coding
common_peak2-25069-139-180-0.308370480432994-1.34368376467541	chr18	34953586	34955569	+	0	NA	intron (NM_001081256, intron 3 of 23)	B3A|SINE|B2	17915	NM_001081256	277250	Mm.277906	NM_029518	ENSMUSG00000038773	Kdm3b	5830462I21Rik|JHDM2B|Jmjd1b|mKIAA1082	KDM3B lysine (K)-specific demethylase 3B	protein-coding
unique_peak2-36634-0-6--3.64748585253182-1.56314192529759	chr3	7204688	7204912	+	0	NA	Intergenic	(TTC)n|Simple_repeat|Simple_repeat	-161804	NM_008862	18767	Mm.3193	NM_008862	ENSMUSG00000027499	Pkia	AI415001|PKIalpha	protein kinase inhibitor, alpha	protein-coding
common_peak2-19779-19-22--0.120874629395327-0.306080386793804	chr1	82831353	82831950	+	0	NA	Intergenic	L2a|LINE|L2	-4407	NM_010472	15463	Mm.392569	NM_010472	ENSMUSG00000026159	Agfg1	AU045498|C130049H11Rik|C85612|D730048C23Rik|Hrb|RAB|Rip	ArfGAP with FG repeats 1	protein-coding
common_peak2-21077-63-96--0.161600251116538-0.397183131122319	chr11	50210204	50211607	+	0	NA	intron (NM_172557, intron 14 of 17)	intron (NM_172557, intron 14 of 17)	19684	NM_021510	59013	Mm.21740	NM_021510	ENSMUSG00000007850	Hnrnph1	AI642080|E430005G16Rik|Hnrnph|Hnrph1	heterogeneous nuclear ribonucleoprotein H1	protein-coding
unique_peak2-36632-4-8--1.19338551529556-1.21878474469819	chr3	5237856	5238239	+	0	NA	intron (NM_030708, intron 1 of 10)	intron (NM_030708, intron 1 of 10)	-17224	NR_045905	72608	Mm.384359	NR_045905		2700069I18Rik	-	RIKEN cDNA 2700069I18 gene	ncRNA
unique_peak2-35749-6-7--0.434601889619698-0.97990265578305	chr18	38185985	38186330	+	0	NA	Intergenic	Intergenic	-27534	NM_001205336	106952	Mm.247642	NM_139206	ENSMUSG00000024451	Arap3	Centd3|Drag1|E030006K04Rik|cnt-d3	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3	protein-coding
unique_peak1-575-18-8-1.14299414978604-1.45476480588849	chr10	128204132	128205183	+	0	NA	Intergenic	Intergenic	19146	NM_001253704	78428	Mm.27358	NM_030100	ENSMUSG00000064030	Wibg	A030010B05Rik|Pym	within bgcn homolog (Drosophila)	protein-coding
common_peak2-28976-31-63--0.774761329186877-1.78594796811655	chr5	104508275	104509115	+	0	NA	intron (NM_010097, intron 10 of 10)	intron (NM_010097, intron 10 of 10)	-2068	NM_001163772	100271704	Mm.366664	NM_001163772	ENSMUSG00000091034	Gm17660	Scpppq1	predicted gene, 17660	protein-coding
common_peak2-32430-36-57--0.378659908959817-0.608301926896957	chrX	167208086	167210078	+	0	NA	Intergenic	Intergenic	-792233	NR_029457	654820	Mm.34441	NM_001039559	ENSMUSG00000072844	G530011O06Rik	-	RIKEN cDNA G530011O06 gene	ncRNA
common_peak2-21773-20-34--0.641208232353773-0.863762398024911	chr11	117091874	117092551	+	0	NA	intron (NM_001113486, intron 2 of 11)	intron (NM_001113486, intron 2 of 11)	31237	NM_001113486	53860	Mm.38450	NM_017380	ENSMUSG00000059248	Sept9	MSF1|Msf|PNUTL4|Sint1	septin 9	protein-coding
unique_peak1-874-11-4-1.18676548936425-1.68134727924692	chr11	30291798	30292304	+	0	NA	Intergenic	Lx|LINE|L1	79778	NM_001100394	75087	Mm.159422	NM_001100394	ENSMUSG00000040919	4930505A04Rik	-	RIKEN cDNA 4930505A04 gene	protein-coding
common_peak1-11163-76-92-0.222785574755251-0.613619973925043	chr15	76080234	76081635	+	0	NA	TTS (NM_023168)	TTS (NM_023168)	2313	NR_105918	102465575		NR_105918		Mir6953	mmu-mir-6953	microRNA mir-6953	ncRNA
common_peak1-17621-23-23-0.136805003787924-0.340939137447793	chr7	45628135	45629015	+	0	NA	Intergenic	Intergenic	891329	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak2-24673-36-68--0.629203370610415-1.32472457598199	chr17	37002416	37003370	+	0	NA	intron (NM_001177872, intron 2 of 6)	ID_B1|SINE|B4	1239	NM_001024134	69097	Mm.307027	NM_001024134	ENSMUSG00000050747	Trim15	1810012B10Rik	tripartite motif-containing 15	protein-coding
common_peak2-28730-8-16--1.08224042330277-0.891319708951328	chr5	36182648	36183276	+	0	NA	intron (NM_001177697, intron 11 of 18)	MIR|SINE|MIR	-53006	NM_027373	70292	Mm.125167	NM_027373	ENSMUSG00000029094	Afap1	2600003E23Rik|9630044L16Rik|AI848729|Afap|mKIAA3018	actin filament associated protein 1	protein-coding
common_peak2-31834-14-21--0.560215458279653-0.519193887192484	chr9	44880551	44881306	+	0	NA	intron (NM_001093749, intron 5 of 5)	B3|SINE|B2	-6338	NM_001005421	270152	Mm.190461	NM_001005421	ENSMUSG00000048534	Amica1	AMICA|Crea7|Gm638	adhesion molecule, interacts with CXADR antigen 1	protein-coding
common_peak1-18541-56-105--0.492324629123956-1.39184945330647	chr8	94837681	94839246	+	0	NA	Intergenic	Intergenic	41556	NR_110452	71296	Mm.86664	NR_033641	ENSMUSG00000031736	Crnde	4933436C20Rik	colorectal neoplasia differentially expressed (non-protein coding)	ncRNA
common_peak2-31705-51-94--0.494931782728375-1.28892327576413	chr9	72661514	72663525	+	0	NA	intron (NM_175485, intron 2 of 19)	intron (NM_175485, intron 2 of 19)	7438	NM_175485	235472	Mm.31696	NM_175485	ENSMUSG00000036030	Prtg	A230098A12Rik|Igdcc5	protogenin homolog (Gallus gallus)	protein-coding
common_peak2-20588-24-68--1.31531455401045-4.03290214921385	chr10	78425213	78426550	+	0	NA	promoter-TSS (NM_147042)	promoter-TSS (NM_147042)	-173	NM_147042	259044	Mm.223425	NM_147042	ENSMUSG00000042774	Olfr1353	MOR139-2	olfactory receptor 1353	protein-coding
unique_peak1-5446-9-5-0.604650905683064-1.21398586181642	chr5	118331822	118332397	+	0	NA	intron (NM_008712, intron 2 of 27)	intron (NM_008712, intron 2 of 27)	14981	NM_008712	18125	Mm.44249	NM_008712	ENSMUSG00000029361	Nos1	2310005C01Rik|NO|NOS-I|Nos-1|bNOS|nNOS	nitric oxide synthase 1, neuronal	protein-coding
unique_peak2-32684-7-5-0.214128329577033-1.01466476204226	chr1	138355593	138356029	+	0	NA	Intergenic	B1_Mur3|SINE|Alu	-8614	NM_001287179	381293	Mm.458468	NM_001081258	ENSMUSG00000041498	Kif14	D1Ertd367e|E130203M01	kinesin family member 14	protein-coding
unique_peak2-36405-2-5--1.50241675698448-1.08602067057793	chr2	126302488	126302811	+	0	NA	intron (NM_001080944, intron 3 of 27)	ID4_|SINE|ID	14640	NM_001080944	241633	Mm.222235	NM_001080944	ENSMUSG00000060131	Atp8b4	A530043E15|Im	ATPase, class I, type 8B, member 4	protein-coding
unique_peak2-38863-5-17--1.87430533744817-1.80287260729378	chr7	145106056	145106736	+	0	NA	Intergenic	Intergenic	477039	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
common_peak1-10162-57-29-1.35914244447041-5.1971155953312	chr13	37783501	37785462	+	0	NA	Intergenic	L1MB3|LINE|L1	-133426	NM_026830	68750	Mm.491109	NM_026830	ENSMUSG00000039087	Rreb1	1110037N09Rik|AA414966|B930013M22Rik	ras responsive element binding protein 1	protein-coding
common_peak1-17750-8-9--0.316705676939792-1.03275496310833	chr7	82867268	82867749	+	0	NA	intron (NM_029332, intron 19 of 36)	B4A|SINE|B4	-125716	NM_001122780	207952	Mm.206223	NM_029652	ENSMUSG00000055652	Klhl25	2810402K13Rik|BC027373|Enc-1	kelch-like 25	protein-coding
unique_peak2-34333-3-6--1.22133801201688-1.08602067057793	chr13	98492732	98493160	+	0	NA	Intergenic	Intergenic	162991	NR_046157	328314	Mm.138047	NR_046157		Gm5086	B230311A21|EG328314	predicted gene 5086	ncRNA
common_peak2-28028-14-14--0.00767443525087419-0.308519316180257	chr4	53439642	53440258	+	0	NA	Intergenic	B3A|SINE|B2	-13335	NM_001159633	100434	Mm.482207	NM_133891	ENSMUSG00000028412	Slc44a1	2210409B22Rik|4833416H08Rik|AW547365|CHTL1|CTL1|Cdw92	solute carrier family 44, member 1	protein-coding
common_peak1-8104-18-22--0.210642804828661-0.321718508207525	chr1	182124579	182125415	+	0	NA	intron (NM_023341, intron 1 of 14)	MER20|DNA|MER1_type	1154	NM_023341	67426	Mm.38330	NM_023341	ENSMUSG00000026489	Adck3	4632432J16Rik|AI462003|Cabc1|mKIAA0451	aarF domain containing kinase 3	protein-coding
common_peak2-23257-16-18--0.129663871175524-0.307235046933848	chr15	25397322	25397966	+	0	NA	Intergenic	Intergenic	53697	NR_027376	432939	Mm.146555	NM_001013791		Gm5468	100040583|EG432939	predicted gene 5468	ncRNA
common_peak2-25073-98-188--0.360473730790522-1.39339205530825	chr18	35118022	35119781	+	0	NA	Intergenic	RMER16-int|LTR|ERVK	-4896	NM_010481	15526	Mm.209419	NM_010481	ENSMUSG00000024359	Hspa9	74kDa|Csa|Grp75|Hsc74|Hsp74|Hsp74a|Hspa9a|Mortalin|Mot-2|Mot2|Mthsp70|Pbp74	heat shock protein 9	protein-coding
unique_peak1-6339-18-7-1.31291915122835-1.71830443967823	chr7	49318142	49318971	+	0	NA	Intergenic	B3|SINE|B2	-4205	NM_001105056	628444	Mm.469901	NM_001105056	ENSMUSG00000092032	Vmn2r59	EG628444	vomeronasal 2, receptor 59	protein-coding
common_peak1-12453-36-55--0.328033835889849-0.518540604135986	chr17	83513809	83515030	+	0	NA	Intergenic	Intergenic	-36854	NR_045094	100503434	Mm.187281	NR_045094		Gm19689	-	predicted gene, 19689	ncRNA
unique_peak1-6246-7-4-0.477162735410827-1.09384600808989	chr7	19317320	19317837	+	0	NA	Intergenic	MuLV-int|LTR|ERV1	14139	NM_001004152	243862	Mm.389833	NM_001004152	ENSMUSG00000044903	Psg22	AA408604|cea9	pregnancy-specific glycoprotein 22	protein-coding
common_peak2-24210-44-64--0.200474978459919-0.389014771016025	chr16	77013508	77014716	+	0	NA	promoter-TSS (NM_013918)	promoter-TSS (NM_013918)	-202	NM_013918	30940	Mm.40986	NM_013918	ENSMUSG00000022867	Usp25	-	ubiquitin specific peptidase 25	protein-coding
common_peak2-25096-11-4-1.18676548936425-1.68134727924692	chr18	36524901	36525316	+	0	NA	intron (NM_001081365, intron 1 of 2)	intron (NM_001081365, intron 1 of 2)	16830	NM_001081365	66060	Mm.272527	NM_001081365		Cystm1	0610010O12Rik	cysteine-rich transmembrane module containing 1	protein-coding
common_peak1-10841-24-13-0.985854980710112-1.52081014994907	chr14	105892774	105893842	+	0	NA	Intergenic	(TA)n|Simple_repeat|Simple_repeat	-4697	NR_045921	74864	Mm.159344	NR_045921	ENSMUSG00000022116	4930449E01Rik	-	RIKEN cDNA 4930449E01 gene	ncRNA
unique_peak1-3393-21-10-1.11005764662894-1.59083646988122	chr19	4208897	4209764	+	0	NA	Intergenic	Intergenic	-5062	NM_019952	56708	Mm.347919	NM_019952		Clcf1	Bsf3|CLC	cardiotrophin-like cytokine factor 1	protein-coding
unique_peak2-32512-5-6--0.511735258063458-0.947717972411649	chr1	54557128	54557545	+	0	NA	intron (NM_001163314, intron 19 of 26)	Lx8|LINE|L1	57192	NM_001163314	241062	Mm.103539	NM_175508	ENSMUSG00000073678	Pgap1	5033403E17Rik|9030223K07Rik|A530084K22|D230012E17Rik|oto	post-GPI attachment to proteins 1	protein-coding
unique_peak1-4172-22-3-2.6472841050874-4.58930897763324	chr2	112713958	112714947	+	0	NA	intron (NM_177652, intron 20 of 103)	B4|SINE|B4	156036	NM_177652	20192	Mm.436657	NM_177652	ENSMUSG00000057378	Ryr3	AI851294|C230090H21|RYR-3	ryanodine receptor 3	protein-coding
unique_peak1-2051-20-8-1.31814978314888-1.77631109801764	chr15	27436485	27437312	+	0	NA	intron (NM_020332, intron 1 of 11)	intron (NM_020332, intron 1 of 11)	40466	NM_020332	11732	Mm.265264	NM_020332	ENSMUSG00000022265	Ank	Ankh|D15Ertd221e|ank|mKIAA1581	progressive ankylosis	protein-coding
unique_peak1-252-6-0-2.5653981103803-2.10720996964787	chr1	91619337	91619862	+	0	NA	intron (NM_001037136, intron 9 of 16)	B1_Mur2|SINE|Alu	-39132	NR_015540	74403	Mm.444291	NR_015540		4933400F21Rik	1700091C04Rik|4930565K10Rik	RIKEN cDNA 4933400F21 gene	ncRNA
unique_peak2-38992-4-6--0.830815435910851-0.989110657569874	chr8	44959460	44959881	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-174825	NM_001079931	384814	Mm.491652	NM_001079931		Gm5347	EG384814	predicted gene 5347	protein-coding
unique_peak1-5908-9-3-1.18961340640422-1.57096726280955	chr6	88071208	88071793	+	0	NA	Intergenic	Intergenic	-17248	NR_105795	102465196		NR_105795	miRBase:MI0021905	Mir6376	mmu-mir-6376	microRNA mir-6376	ncRNA
common_peak2-20169-9-20--1.20270401637454-1.23014042908325	chr1	171221969	171222588	+	0	NA	Intergenic	MIRc|SINE|MIR	239317	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
common_peak1-14782-21-16-0.482026424015896-0.650819692678078	chr3	89313975	89315221	+	0	NA	Intergenic	Intergenic	-9488	NM_080466	140493	Mm.120250	NM_080466		Kcnn3	KCa2.3|SK3|SKCA3	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	protein-coding
common_peak2-21859-20-25--0.212364933549899-0.342639663781856	chr12	8207751	8208656	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-6710	NM_172401	68832	Mm.25608	NM_172401	ENSMUSG00000037669	1110057K04Rik	LDAH	RIKEN cDNA 1110057K04 gene	protein-coding
common_peak1-8710-19-17-0.232762325219374-0.392630012299441	chr11	95403126	95404143	+	0	NA	Intergenic	MTB_Mm|LTR|MaLR	-27755	NM_130858	104079	Mm.22970	NM_130858	ENSMUSG00000046719	Nxph3	-	neurexophilin 3	protein-coding
common_peak2-31832-137-174-0.331823587723433-1.46989587005414	chr9	44604014	44605706	+	0	NA	intron (NM_027865, intron 3 of 8)	intron (NM_027865, intron 3 of 8)	2439	NM_027865	71687	Mm.41409	NM_027865	ENSMUSG00000002032	Tmem25	0610039J01Rik|AI429491	transmembrane protein 25	protein-coding
common_peak2-25705-11-11--0.0762689164695427-0.301029995663976	chr19	20529796	20530257	+	0	NA	Intergenic	IAPLTR2_Mm|LTR|ERVK	-37179	NR_015502	320092	Mm.482524	NR_015502		E030003E18Rik	1700127G21Rik	RIKEN cDNA E030003E18 gene	ncRNA
common_peak1-19337-21-66--1.49659992519154-4.72687330272494	chrX	166509877	166510719	+	0	NA	Intergenic	Intergenic	-93449	NR_029457	654820	Mm.34441	NM_001039559	ENSMUSG00000072844	G530011O06Rik	-	RIKEN cDNA G530011O06 gene	ncRNA
common_peak2-21234-24-22-0.269647946710704-0.457753417732779	chr11	67052045	67053087	+	0	NA	intron (NM_010855, intron 2 of 39)	intron (NM_010855, intron 2 of 39)	1252	NM_010855	17884	Mm.297382	NM_010855	ENSMUSG00000057003	Myh4	AI506973|MHC2B|MM|MYH-2B|Minimsc|Minmus|MyHC-IIb|Myhsf	myosin, heavy polypeptide 4, skeletal muscle	protein-coding
common_peak1-8829-77-89-0.292673483226323-0.783142886066638	chr11	23305597	23307563	+	0	NA	intron (NM_001190401, intron 33 of 79)	intron (NM_001190401, intron 33 of 79)	91459	NM_001290655	268390	Mm.13148	NM_172391	ENSMUSG00000020288	Ahsa2	-	AHA1, activator of heat shock protein ATPase 2	protein-coding
common_peak1-14344-13-15--0.221527969362231-0.308519316180257	chr2	164832906	164833609	+	0	NA	intron (NM_144892, intron 5 of 7)	intron (NM_144892, intron 5 of 7)	27022	NM_144892	228869	Mm.233080	NM_144892	ENSMUSG00000039804	Ncoa5	CIA	nuclear receptor coactivator 5	protein-coding
common_peak2-31570-19-30--0.551508983725189-0.647723624534446	chr8	119394864	119395720	+	0	NA	Intergenic	Intergenic	50044	NM_026844	66531	Mm.4011	NM_026844	ENSMUSG00000014633	Cmc2	1110046L09Rik|2310061C15Rik|DC13	COX assembly mitochondrial protein 2	protein-coding
common_peak1-10771-76-92-0.222785574755251-0.613619973925043	chr14	72709186	72710785	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	399825	NM_207636	319448	Mm.205421	NM_207636	ENSMUSG00000033487	Fndc3a	1700094E19Rik|D14Ertd453e|F730017H24Rik|Fndc3|sys	fibronectin type III domain containing 3A	protein-coding
common_peak1-11913-51-42-0.648659070900475-1.55729322517715	chr17	29440205	29442129	+	0	NA	Intergenic	Intergenic	-14660	NM_023734	74116	Mm.30950	NM_023734	ENSMUSG00000024011	Pi16	1200009H11Rik|Cripi|PI-16	peptidase inhibitor 16	protein-coding
common_peak2-20404-16-21--0.341167976369236-0.392630012299441	chr10	23796746	23797485	+	0	NA	exon (NM_001010830, exon 1 of 1)	exon (NM_001010830, exon 1 of 1)	809	NM_001010830	215859	Mm.377239	NM_001010830	ENSMUSG00000096442	Taar8a	Gm230|taR-8a	trace amine-associated receptor 8A	protein-coding
common_peak2-24875-26-23-0.342936591437306-0.502376547007663	chr17	83214763	83215780	+	0	NA	Intergenic	Intergenic	262294	NR_045094	100503434	Mm.187281	NR_045094		Gm19689	-	predicted gene, 19689	ncRNA
unique_peak2-32800-5-8--0.874305337448166-1.10484139239135	chr1	182954766	182955258	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-7386	NM_010145	13849	Mm.9075	NM_010145	ENSMUSG00000038776	Ephx1	AI195553|Eph-1|Eph1|mEH	epoxide hydrolase 1, microsomal	protein-coding
common_peak2-30741-11-10-0.0492619656143161-0.31137425193576	chr7	118495049	118495653	+	0	NA	Intergenic	ORR1B1-int|LTR|MaLR	-229162	NR_015573	75479	Mm.381620	NR_015573		1700012D14Rik	-	RIKEN cDNA 1700012D14 gene	ncRNA
common_peak1-18627-24-40--0.564342101850367-0.763288167491253	chr8	109868466	109869245	+	0	NA	exon (NM_133957, exon 6 of 16)	exon (NM_133957, exon 6 of 16)	51485	NM_133957	54446	Mm.390057	NM_018823	ENSMUSG00000003847	Nfat5	AI225870|B130038B15Rik|CAG-8|CAG80|NFATL1|OREBP|TonEBP|mKIAA0827|nfatz	nuclear factor of activated T cells 5	protein-coding
unique_peak2-38977-2-8--2.08737925770563-1.65811743852845	chr8	39005440	39005829	+	0	NA	intron (NM_145841, intron 2 of 7)	intron (NM_145841, intron 2 of 7)	309622	NR_029884	723860		NR_029884		Mir383	Mirn383|mmu-mir-383	microRNA 383	ncRNA
unique_peak2-39854-3-5--0.998945590680433-0.96108193396963	chrX	71492362	71492708	+	0	NA	promoter-TSS (NM_010227)	promoter-TSS (NM_010227)	-662	NM_001290421	192176	Mm.295533	NM_010227	ENSMUSG00000031328	Flna	ABP-280|Dilp2|F730004A14Rik|Fln1|GENA 379|filamin-1	filamin, alpha	protein-coding
unique_peak2-33795-8-6-0.197867495889966-1.03789460276074	chr11	120249777	120250369	+	0	NA	intron (NM_001195023, intron 13 of 16)	intron (NM_001195023, intron 13 of 16)	-10013	NM_027980	71885	Mm.274890	NM_027980	ENSMUSG00000025384	2310003H01Rik	Faap100	RIKEN cDNA 2310003H01 gene	protein-coding
common_peak1-18593-37-31-0.525993071485819-0.939626589724289	chr8	106611513	106612903	+	0	NA	Intergenic	RLTR13D1|LTR|ERVK	-13317	NM_009868	12562	Mm.21767	NM_009868	ENSMUSG00000031871	Cdh5	7B4|AA408225|Cd144|VE-Cad|VECD|VEcad|Vec	cadherin 5	protein-coding
unique_peak1-173-9-0-3.18961340640422-3.01029995663981	chr1	74112253	74112729	+	0	NA	intron (NM_001289895, intron 3 of 32)	MLT1F1|LTR|MaLR	58530	NM_027884	21961	Mm.309975	NM_027884	ENSMUSG00000055322	Tns1	1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns	tensin 1	protein-coding
common_peak1-7466-19-24--0.241168863113038-0.344491671143527	chr1	160792027	160792996	+	0	NA	intron (NM_001085376, intron 3 of 21)	intron (NM_001085376, intron 3 of 21)	95058	NM_001085376	23850	Mm.458621	NM_001085376	ENSMUSG00000073530	Pappa2	PAPP-A2|PLAC3|Pappe	pappalysin 2	protein-coding
common_peak2-26919-25-8-1.69192490390279-3.04993787975775	chr2	163492098	163492589	+	0	NA	intron (NM_001039390, intron 2 of 4)	intron (NM_001039390, intron 2 of 4)	8149	NM_001164053	18769	Mm.10091	NM_011106	ENSMUSG00000035268	Pkig	PKIgamma	protein kinase inhibitor, gamma	protein-coding
common_peak1-16706-13-26--0.9764154715257-1.09492971584134	chr6	22360985	22361703	+	0	NA	Intergenic	Intergenic	-55263	NM_138587	27999	Mm.490307	NM_138587	ENSMUSG00000029672	Fam3c	D6Wsu176e|Ilei	family with sequence similarity 3, member C	protein-coding
unique_peak2-38053-8-13--0.802132504110034-0.562038191119711	chr6	43256526	43256994	+	0	NA	exon (NM_130869, exon 4 of 9)	exon (NM_130869, exon 4 of 9)	2793	NM_130869	18291	Mm.17715	NM_130869	ENSMUSG00000029736	Nobox	OG2|Og2x	NOBOX oogenesis homeobox	protein-coding
unique_peak1-5725-9-2-1.60465090568306-1.87199725847353	chr6	43013441	43013936	+	0	NA	Intergenic	RMER5|LTR|ERV1	-52055	NM_146655	258649	Mm.271494	NM_146655	ENSMUSG00000094669	Olfr441	MOR261-3	olfactory receptor 441	protein-coding
unique_peak2-36314-4-5--0.608423014574403-0.909929411522249	chr2	77270887	77271265	+	0	NA	intron (NM_178723, intron 6 of 9)	Lx7|LINE|L1	-29625	NR_040368	100503106	Mm.443215	NR_040368	ENSMUSG00000085845	Gm13944	OTTMUSG00000015155	predicted gene 13944	ncRNA
common_peak1-16530-18-43--1.14651246740895-2.16720861012097	chr5	142905256	142905924	+	0	NA	intron (NM_199068, intron 1 of 8)	B1_Mur3|SINE|Alu	28139	NM_199068	17425	Mm.24214	NM_010812	ENSMUSG00000056493	Foxk1	A630048H08Rik|AI463295|ENSMUSG00000075577|Gm10868|Mnf	forkhead box K1	protein-coding
common_peak1-14206-9-6-0.382258484346616-1.11707584880836	chr2	148902250	148902732	+	0	NA	Intergenic	Lx3C|LINE|L1	-201287	NM_009976	13010	Mm.4263	NM_009976	ENSMUSG00000027447	Cst3	CysC	cystatin C	protein-coding
common_peak2-22781-11-14--0.398197011356905-0.379391706698377	chr14	70074194	70074815	+	0	NA	intron (NM_033325, intron 7 of 13)	intron (NM_033325, intron 7 of 13)	-17551	NR_105915	102465573		NR_105915		Mir6950	mmu-mir-6950	microRNA mir-6950	ncRNA
unique_peak2-37639-3-4--0.73591118484664-0.864171920961574	chr5	73578994	73579411	+	0	NA	intron (NM_028194, intron 3 of 62)	B1_Mur2|SINE|Alu	68655	NM_028194	72313	Mm.260594	NM_028194	ENSMUSG00000070733	Fryl	2010313D22Rik|2310004H21Rik|2510002A14Rik|9030227G01Rik|mKIAA0826	furry homolog-like (Drosophila)	protein-coding
unique_peak2-34037-7-7--0.200909169701811-0.97990265578305	chr12	112627742	112628184	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-12034	NM_183016	217866	Mm.27397	NM_183016	ENSMUSG00000021279	Cdc42bpb	MRCKb	CDC42 binding protein kinase beta	protein-coding
common_peak1-8156-40-63--0.341024317248902-0.575830045570394	chr1	192137565	192138831	+	0	NA	Intergenic	Intergenic	-143639	NM_008937	19130	Mm.132579	NM_008937	ENSMUSG00000010175	Prox1	A230003G05Rik	prospero homeobox 1	protein-coding
common_peak1-16875-50-43-0.581508697841655-1.3628545831955	chr6	66910221	66911621	+	0	NA	intron (NM_001177560, intron 3 of 4)	RMER19C|LTR|ERVK	64036	NM_001177558	14701	Mm.234342	NM_025278	ENSMUSG00000036402	Gng12	2010305F15Rik|AA536815|AI115529|AI314170|AI842738	guanine nucleotide binding protein (G protein), gamma 12	protein-coding
common_peak2-23801-10-7-0.356415345008769-1.12966497611638	chr15	99866014	99866411	+	0	NA	Intergenic	B3|SINE|B2	-2883	NM_001159361	239667	Mm.243658	NM_172819	ENSMUSG00000023026	Dip2b	4932422C22|AI317237|AI854602|mKIAA1463	DIP2 disco-interacting protein 2 homolog B (Drosophila)	protein-coding
common_peak2-30456-19-12-0.702247608520594-0.840839978588874	chr7	45560051	45560711	+	0	NA	Intergenic	Intergenic	959523	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak1-2771-8-2-1.42025991722641-1.65811743852845	chr17	6171892	6172403	+	0	NA	intron (NM_054040, intron 1 of 13)	L1M2|LINE|L1	33999	NM_054040	68842	Mm.449307	NM_054040	ENSMUSG00000034377	Tulp4	1110057P05Rik|2210038L17Rik|Tusp	tubby like protein 4	protein-coding
unique_peak2-37837-7-6--0.00826409175941478-0.97990265578305	chr5	134645811	134646206	+	0	NA	intron (NM_033572, intron 2 of 10)	B2_Mm1a|SINE|B2	6629	NM_033572	94254	Mm.29508	NM_033572	ENSMUSG00000061979	Wbscr16	5730496C04Rik|AU019812	Williams-Beuren syndrome chromosome region 16 homolog (human)	protein-coding
common_peak1-13773-18-31--0.687080848771648-0.820293215674341	chr2	35661330	35661932	+	0	NA	intron (NM_029774, intron 7 of 9)	intron (NM_029774, intron 7 of 9)	-13079	NR_040618	77665	Mm.400558	NR_040618	ENSMUSG00000086449	9030204H09Rik	-	RIKEN cDNA 9030204H09 gene	ncRNA
common_peak2-21334-71-69-0.515161161775005-1.54283344403661	chr11	75732875	75734052	+	0	NA	intron (NM_001291159, intron 1 of 4)	B1_Mus2|SINE|Alu	5930	NM_001291159	380714	Mm.425697	NM_029548	ENSMUSG00000020847	Rph3al	Gm1753|Noc2	rabphilin 3A-like (without C2 domains)	protein-coding
unique_peak2-38008-6-6--0.241956811677302-0.947717972411649	chr6	30510242	30510693	+	0	NA	intron (NM_001024698, intron 10 of 10)	intron (NM_001024698, intron 10 of 10)	-7909	NM_027926	71791	Mm.105759	NM_027926	ENSMUSG00000039070	Cpa4	1110019K20Rik|AV009555	carboxypeptidase A4	protein-coding
unique_peak1-3359-9-5-0.604650905683064-1.21398586181642	chr19	41451382	41451933	+	0	NA	intron (NM_031376, intron 1 of 16)	MIR3|SINE|MIR	7903	NM_031376	83490	Mm.222266	NM_031376	ENSMUSG00000025017	Pik3ap1	1810044J04Rik|BCAP	phosphoinositide-3-kinase adaptor protein 1	protein-coding
common_peak2-31145-78-169--0.602569841977167-2.82925450268644	chr8	40510717	40512568	+	0	NA	Intergenic	Intergenic	128308	NR_044988	621335	Mm.208080	NR_044988		Gm6213	EG621335	predicted gene 6213	ncRNA
common_peak1-19236-54-53-0.418198259466266-0.930588659547694	chr9	108459868	108461255	+	0	NA	intron (NM_175143, intron 9 of 9)	intron (NM_175143, intron 9 of 9)	-2271	NM_011830	23918	Mm.6065	NM_011830	ENSMUSG00000062867	Impdh2	IMPD	inosine 5'-phosphate dehydrogenase 2	protein-coding
unique_peak2-36708-1-6--2.43441193227435-1.56314192529759	chr3	51358996	51359403	+	0	NA	intron (NM_080793, intron 1 of 7)	intron (NM_080793, intron 1 of 7)	-4480	NR_033624	100039684	Mm.387178	NR_033624	ENSMUSG00000097885	5031434O11Rik	AI481280|Gm2370	RIKEN cDNA 5031434O11 gene	ncRNA
common_peak1-13820-52-80--0.231590012618925-0.477531576394469	chr2	53190514	53192243	+	0	NA	Intergenic	L1_Mus3|LINE|L1	140260	NM_022989	65103	Mm.37623	NM_022989	ENSMUSG00000026960	Arl6ip6	2310057C01Rik|2610529A11Rik|Aip-6	ADP-ribosylation factor-like 6 interacting protein 6	protein-coding
common_peak1-10684-13-11-0.193509529916613-0.379391706698377	chr14	54603565	54604151	+	0	NA	Intergenic	Intergenic	269746	NM_001113358	13135	Mm.319038	NM_010015	ENSMUSG00000022174	Dad1	AI323713	defender against cell death 1	protein-coding
common_peak1-8757-157-190-0.442466186382254-2.67515149900097	chr11	5097855	5100032	+	0	NA	intron (NM_032396, intron 7 of 8)	intron (NM_032396, intron 7 of 8)	-46718	NM_080595	140703	Mm.840	NM_080595	ENSMUSG00000034164	Emid1	AW122071|CO-5|Emu1	EMI domain containing 1	protein-coding
unique_peak1-6452-8-3-1.00522241794757-1.39487600375387	chr7	100288942	100289428	+	0	NA	Intergenic	L1Md_A|LINE|L1	60796	NM_021427	58238	Mm.113787	NM_021427		Fam181b	A830059I20Rik|AB041569	family with sequence similarity 181, member B	protein-coding
unique_peak1-858-14-4-1.57728806547028-2.4322161449009	chr11	20615542	20616268	+	0	NA	intron (NM_001252503, intron 2 of 7)	L1_Mus1|LINE|L1	25654	NM_001290545	216549	Mm.356580	NM_181411	ENSMUSG00000049659	Aftph	-	aftiphilin	protein-coding
unique_peak1-854-10-0-3.35641534500877-3.31132995230379	chr11	20360703	20361177	+	0	NA	Intergenic	Intergenic	-82316	NM_021372	58172	Mm.339676	NM_021372	ENSMUSG00000049800	Sertad2	AB041541|AU021878|Kiaa0127|SEI-2|Sei2|TRIP-Br2|mKIAA0127	SERTA domain containing 2	protein-coding
common_peak2-26324-10-22--1.16714661104824-1.30248952876293	chr2	33467831	33468511	+	0	NA	intron (NM_010725, intron 2 of 7)	intron (NM_010725, intron 2 of 7)	27860	NM_010725	16917	Mm.39825	NM_010725	ENSMUSG00000038765	Lmx1b	LMX1.1|LMX1.2	LIM homeobox transcription factor 1 beta	protein-coding
unique_peak1-1128-11-6-0.701338662194009-1.32595962126035	chr11	95100480	95101048	+	0	NA	Intergenic	RSINE1|SINE|B4	-22079	NM_053093	93670	Mm.40085	NM_053093	ENSMUSG00000020872	Tac4	AW489379|PPT-C	tachykinin 4	protein-coding
common_peak2-32342-11-8-0.338768582809301-1.14218153353838	chrX	75155527	75156031	+	0	NA	Intergenic	L1Md_F2|LINE|L1	45682	NM_001085544	628923	Mm.79600	NM_001085544	ENSMUSG00000079522	Gm14744	OTTMUSG00000017866|Obp1f	predicted gene 14744	protein-coding
common_peak1-14964-16-20--0.274053780510699-0.353907621462756	chr3	105054244	105055112	+	0	NA	Intergenic	L1Md_F2|LINE|L1	184916	NM_029228	75269	Mm.307994	NM_029228	ENSMUSG00000051788	4930564D02Rik	-	RIKEN cDNA 4930564D02 gene	protein-coding
common_peak1-8041-11-27--1.29866133780599-1.81053432848961	chr1	171287570	171288126	+	0	NA	Intergenic	Intergenic	173747	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
unique_peak1-6671-12-5-1.06381348436648-1.78669045979184	chr8	18949612	18950185	+	0	NA	5' UTR (NM_001286469, exon 1 of 7)	5' UTR (NM_001286469, exon 1 of 7)	973	NM_001286469	319581	Mm.111354	NM_176951	ENSMUSG00000039814	Xkr5	5430438H03Rik|XRG5	X Kell blood group precursor-related family, member 5	protein-coding
unique_peak2-33225-4-15--2.02346051385325-2.4322161449009	chr10	120201422	120202136	+	0	NA	Intergenic	Intergenic	-1009	NR_038000	70874	Mm.427286	NR_038000	ENSMUSG00000044544	4921513I03Rik	-	RIKEN cDNA 4921513I03 gene	ncRNA
common_peak1-16692-28-33--0.0345037214288766-0.301029995664001	chr6	17064785	17065610	+	0	NA	Intergenic	Intergenic	50048	NM_207176	21753	Mm.436548	NM_011570	ENSMUSG00000029552	Tes	D6Ertd352e|TESS|Tes1|Tes2|testin2	testis derived transcript	protein-coding
unique_peak1-1697-27-7-1.99154595089524-4.07016573886257	chr13	80941168	80942462	+	0	NA	Intergenic	Lx7|LINE|L1	-80868	NM_001042591	105171	Mm.423137	NM_001042591	ENSMUSG00000074794	Arrdc3	AI450344|mKIAA1376	arrestin domain containing 3	protein-coding
unique_peak2-32969-3-4--0.73591118484664-0.864171920961574	chr10	52416915	52417240	+	0	NA	intron (NM_178675, intron 1 of 7)	intron (NM_178675, intron 1 of 7)	6770	NM_178675	215085	Mm.338690	NM_178675	ENSMUSG00000038602	Slc35f1	Duf6|E130016L02	solute carrier family 35, member F1	protein-coding
common_peak2-26690-16-12-0.417823924126969-0.489164546851866	chr2	126350767	126351352	+	0	NA	Intergenic	Lx9|LINE|L1	-27701	NM_011978	26458	Mm.290044	NM_011978		Slc27a2	ACSVL1|FATP2|VLCS|Vlac|Vlacs	solute carrier family 27 (fatty acid transporter), member 2	protein-coding
common_peak2-20880-9-19--1.13231468848314-1.09394599973099	chr11	119389926	119390644	+	0	NA	Intergenic	Intergenic	18849	NM_008730	18164	Mm.5142	NM_008730	ENSMUSG00000025582	Nptx1	D11Bwg1004e|Np1	neuronal pentraxin 1	protein-coding
common_peak2-25562-13-16--0.30899081061257-0.330004445983672	chr19	6477034	6477648	+	0	NA	intron (NM_001205234, intron 9 of 22)	intron (NM_001205234, intron 9 of 22)	58603	NM_001205234	18190	Mm.329616	NM_020253	ENSMUSG00000033768	Nrxn2	6430591O13Rik|mKIAA0921	neurexin II	protein-coding
common_peak2-21256-6-8--0.60452689106201-1.03789460276074	chr11	69410361	69410740	+	0	NA	Intergenic	Intergenic	8912	NM_013415	11932	Mm.235204	NM_013415	ENSMUSG00000041329	Atp1b2	Amog|Atpb-2	ATPase, Na+/K+ transporting, beta 2 polypeptide	protein-coding
common_peak1-15710-18-33--0.774543690021988-1.00055860626307	chr4	140961209	140961992	+	0	NA	intron (NM_019701, intron 16 of 19)	intron (NM_019701, intron 16 of 19)	-6979	NM_024412	12733	Mm.167900	NM_024412	ENSMUSG00000033770	Clcnka	C75963|CLC-K1|Clcnk1	chloride channel Ka	protein-coding
common_peak2-31644-18-34--0.816363865716615-1.09826982379496	chr8	124662504	124663633	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-142973	NM_009569	22761	Mm.3105	NM_009569	ENSMUSG00000049577	Zfpm1	FOG|Fog1	zinc finger protein, multitype 1	protein-coding
common_peak2-29157-52-51-0.407820272124607-0.889546191492162	chr5	129786507	129787903	+	0	NA	Intergenic	Intergenic	184580	NM_001081342	243277	Mm.440501	NM_177734	ENSMUSG00000044017	Gpr133	E230012M21Rik	G protein-coupled receptor 133	protein-coding
common_peak2-21162-7-10--0.660340788339108-1.12966497611638	chr11	58847172	58847645	+	0	NA	intron (NM_199152, intron 72 of 89)	intron (NM_199152, intron 72 of 89)	55813	NM_053168	94091	Mm.248049	NM_053168	ENSMUSG00000020455	Trim11	-	tripartite motif-containing 11	protein-coding
common_peak1-14887-42-61--0.211866982519691-0.393610822453566	chr3	96103886	96105445	+	0	NA	Intergenic	Intergenic	-6773	NM_010186	14129	Mm.150	NM_010186	ENSMUSG00000015947	Fcgr1	AI323638|AV092959|CD64|FcgammaRI|IGGHAFC	Fc receptor, IgG, high affinity I	protein-coding
unique_peak1-3104-11-3-1.50869358425161-1.95434855131066	chr18	25716571	25717152	+	0	NA	intron (NM_001146294, intron 2 of 12)	intron (NM_001146294, intron 2 of 12)	195623	NM_133195	108013	Mm.266435	NM_133195	ENSMUSG00000024268	Celf4	A230070D14Rik|BRUNOL-4|Brul4|Brunol4|C130060B05Rik	CUGBP, Elav-like family member 4	protein-coding
unique_peak2-39984-7-8--0.370834171144123-1.00793137938329	chrX	155337889	155338488	+	0	NA	Intergenic	Intergenic	-355526	NM_148945	110651	Mm.328476	NM_148945	ENSMUSG00000031309	Rps6ka3	C130006E23|MAPKAPK-1b|MPK-9|Rsk2|S6K-alpha3|p90RSK3|pp90RSK2	ribosomal protein S6 kinase polypeptide 3	protein-coding
common_peak2-32147-7-9--0.522837264589173-1.05908390183068	chr9	108146052	108146485	+	0	NA	intron (NM_001276492, intron 2 of 4)	intron (NM_001276492, intron 2 of 4)	19878	NM_010017	13138	Mm.7524	NM_010017		Dag1	D9Wsu13e|DG|Dp427|Dp71	dystroglycan 1	protein-coding
unique_peak2-35065-1-5--2.2120195109379-1.32905871926422	chr16	13494212	13494644	+	0	NA	Intergenic	Intergenic	-23155	NR_105784	102466153		NR_105784	miRBase:MI0021894	Mir6365	mmu-mir-6365	microRNA mir-6365	ncRNA
unique_peak1-6453-7-3-0.799090830298189-1.23214870625617	chr7	100473023	100473494	+	0	NA	Intergenic	Intergenic	244869	NM_021427	58238	Mm.113787	NM_021427		Fam181b	A830059I20Rik|AB041569	family with sequence similarity 181, member B	protein-coding
common_peak1-19160-26-52--0.800021362404737-1.59856525524509	chr9	95749516	95750473	+	0	NA	Intergenic	B4A|SINE|B4	-4296	NM_001033210	102502	Mm.11869	NM_001033210	ENSMUSG00000049493	Pls1	AI427122	plastin 1 (I-isoform)	protein-coding
common_peak2-30084-54-33-1.08562292037939-3.52320289706014	chr6	134699627	134700809	+	0	NA	intron (NM_001048054, intron 3 of 6)	intron (NM_001048054, intron 3 of 6)	42428	NM_130447	70686	Mm.491182	NM_130447	ENSMUSG00000030203	Dusp16	3830417M17Rik|AW558566|D6Ertd213e|MKP-7|MKP7|Mkpm	dual specificity phosphatase 16	protein-coding
common_peak2-30133-12-11-0.0638134843664826-0.337263207250336	chr6	140368597	140369060	+	0	NA	Intergenic	Intergenic	-3792	NM_144920	109135	Mm.247670	NM_144920	ENSMUSG00000030231	Plekha5	2810431N21Rik|AI428202|AK129423|AMH-Cre|Ayu21-9|Gt(pU21)9Imeg|Pepp2|Tg(AMH-cre)1Flor	pleckstrin homology domain containing, family A member 5	protein-coding
common_peak2-22770-30-57--0.688305585635699-1.33966217785262	chr14	20478991	20480039	+	0	NA	Intergenic	Intergenic	-57706	NM_001024706	432825	Mm.327147	NM_001024706	ENSMUSG00000095024	Gm5458	EG432825	predicted gene 5458	protein-coding
unique_peak2-33826-8-13--0.802132504110034-0.562038191119711	chr12	8398085	8398597	+	0	NA	Intergenic	(CAGAGA)n|Simple_repeat|Simple_repeat	78102	NM_021429	58240	Mm.309954	NM_021429	ENSMUSG00000020605	Hs1bp3	-	HCLS1 binding protein 3	protein-coding
common_peak2-29369-14-16--0.188246680892695-0.308035960714963	chr6	135266203	135266787	+	0	NA	Intergenic	Intergenic	-6093	NM_029595	76400	Mm.293018	NM_029595		Pbp2	1700023A18Rik|AI326308|Pebp-2|Pebp2	phosphatidylethanolamine binding protein 2	protein-coding
common_peak2-27269-47-65--0.109552694591906-0.328608881955056	chr3	57302710	57304375	+	0	NA	intron (NM_133784, intron 3 of 6)	RMER20B|LTR|ERVK	74210	NM_145539	229302	Mm.26618	NM_145539	ENSMUSG00000027801	Tm4sf4	Iltmp	transmembrane 4 superfamily member 4	protein-coding
unique_peak1-226-9-2-1.60465090568306-1.87199725847353	chr1	88560965	88561503	+	0	NA	Intergenic	Intergenic	5914	NM_010933	18159	Mm.12802	NM_010933	ENSMUSG00000026241	Nppc	CNP|lbab	natriuretic peptide type C	protein-coding
common_peak1-17873-37-43-0.0665614528485214-0.322992865635707	chr7	116092769	116093954	+	0	NA	Intergenic	Intergenic	15432	NM_025344	66085	Mm.182962	NM_025344		Eif3f	0610037M02Rik|AA409853|Eif3s5	eukaryotic translation initiation factor 3, subunit F	protein-coding
unique_peak2-37641-1-6--2.43441193227435-1.56314192529759	chr5	73803792	73804296	+	0	NA	intron (NM_181323, intron 3 of 15)	intron (NM_181323, intron 3 of 15)	6727	NM_181323	231293	Mm.280211	NM_181323	ENSMUSG00000029154	Cwh43	C130090K23Rik|imds-60	cell wall biogenesis 43 C-terminal homolog (S. cerevisiae)	protein-coding
unique_peak1-3749-8-1-2.00522241794757-2.05605744720049	chr19	51476296	51476758	+	0	NA	Intergenic	Intergenic	-723391	NM_001290356	58178	Mm.313672	NM_021377	ENSMUSG00000043531	Sorcs1	Sorcs|mSorCS	VPS10 domain receptor protein SORCS 1	protein-coding
common_peak2-20253-35-71--0.738554742979808-1.80978279797655	chr1	184731553	184732581	+	0	NA	intron (NM_144796, intron 1 of 7)	intron (NM_144796, intron 1 of 7)	37030	NM_144796	96935	Mm.331052	NM_144796	ENSMUSG00000038576	Susd4	AI848994|E430021N18Rik|N28096	sushi domain containing 4	protein-coding
common_peak2-27345-7-6--0.00826409175941478-0.97990265578305	chr3	75957082	75957423	+	0	NA	intron (NM_001253719, intron 2 of 15)	L1Md_F2|LINE|L1	77747	NM_001253719	213262	Mm.379337	NM_178673	ENSMUSG00000034098	Fstl5	9130207J01Rik	follistatin-like 5	protein-coding
common_peak1-10687-9-8-0.0196884049619079-1.03275496310833	chr14	54876161	54876688	+	0	NA	intron (NM_001205181, intron 1 of 6)	intron (NM_001205181, intron 1 of 6)	-2483	NM_134076	105501	Mm.28771	NM_134076	ENSMUSG00000040997	Abhd4	1110035H23Rik|AI429574|Abh4	abhydrolase domain containing 4	protein-coding
common_peak2-29173-10-9-0.0344872501214071-1.05503135781948	chr5	134639531	134639964	+	0	NA	intron (NM_033572, intron 6 of 10)	intron (NM_033572, intron 6 of 10)	12890	NM_033572	94254	Mm.29508	NM_033572	ENSMUSG00000061979	Wbscr16	5730496C04Rik|AU019812	Williams-Beuren syndrome chromosome region 16 homolog (human)	protein-coding
common_peak2-29375-80-66-0.78448657591158-3.21778854595081	chr6	121109506	121110604	+	0	NA	Intergenic	Intergenic	-23630	NM_028730	74043	Mm.491240	NM_028730	ENSMUSG00000067825	Pex26	4632428M11Rik|AI853212	peroxisomal biogenesis factor 26	protein-coding
common_peak2-23083-14-13-0.0918612383000403-0.332077462497413	chr14	76110305	76110814	+	0	NA	intron (NM_177381, intron 20 of 22)	intron (NM_177381, intron 20 of 22)	43741	NM_177381	338337	Mm.86507	NM_177381	ENSMUSG00000034893	Cog3	E430004N23	component of oligomeric golgi complex 3	protein-coding
common_peak2-20893-9-10--0.269818212233077-1.05503135781948	chr11	3913304	3913818	+	0	NA	Intergenic	(CAT)n|Simple_repeat|Simple_repeat	-18224	NM_146013	103655	Mm.337476	NM_146013	ENSMUSG00000019368	Sec14l4	AI256582|AW536553|SPF|TAP	SEC14-like 4 (S. cerevisiae)	protein-coding
common_peak1-14676-57-101--0.406392301892566-1.00585340319754	chr3	62506383	62507604	+	0	NA	Intergenic	Intergenic	-97931	NM_177346	229357	Mm.95181	NM_177346		Gpr149	9630018L10Rik|Ieda|PGR10|R35	G protein-coupled receptor 149	protein-coding
unique_peak2-39313-2-6--1.72480917832092-1.26211192963361	chr8	124632404	124632723	+	0	NA	Intergenic	B4|SINE|B4	130639	NR_106096	102466915		NR_106096		Mir7237	mmu-mir-7237	microRNA mir-7237	ncRNA
unique_peak2-39210-2-13--2.72480917832092-2.79529063155376	chr8	106415310	106415787	+	0	NA	Intergenic	Intergenic	-209977	NM_009868	12562	Mm.21767	NM_009868	ENSMUSG00000031871	Cdh5	7B4|AA408225|Cd144|VE-Cad|VECD|VEcad|Vec	cadherin 5	protein-coding
common_peak2-24715-18-35--0.857005850213961-1.20071330053878	chr17	46592598	46593932	+	0	NA	intron (NM_001162864, intron 13 of 14)	intron (NM_001162864, intron 13 of 14)	-17839	NM_144856	108114	Mm.387538	NM_144856	ENSMUSG00000067144	Slc22a7	NLT|OAT2	solute carrier family 22 (organic anion transporter), member 7	protein-coding
common_peak1-11626-10-22--1.16714661104824-1.30248952876293	chr16	20477366	20477907	+	0	NA	Intergenic	Intergenic	-21254	NM_172265	224045	Mm.233855	NM_172265	ENSMUSG00000003235	Eif2b5	C81315	eukaryotic translation initiation factor 2B, subunit 5 epsilon	protein-coding
common_peak1-8623-25-16-0.774387064094767-1.1282783422172	chr10	117717054	117717919	+	0	NA	Intergenic	ORR1E|LTR|MaLR	14608	NM_054079	116849	Mm.213193	NM_054079	ENSMUSG00000090461	Iltifb	IL-22b|IL-TIFb|Il22b	interleukin 10-related T cell-derived inducible factor beta	protein-coding
common_peak1-8726-59-97--0.28934584324263-0.656128265330081	chr11	119602706	119603913	+	0	NA	intron (NM_028898, intron 4 of 33)	intron (NM_028898, intron 4 of 33)	92370	NR_045313	319454	Mm.442144	NR_045312	ENSMUSG00000085081	Rptoros	A430071A18Rik	regulatory associated protein of MTOR, complex 1, opposite strand	ncRNA
common_peak2-24064-44-73--0.387560531060415-0.729729194218058	chr16	30069715	30071365	+	0	NA	Intergenic	CpG	5097	NM_008235	15205	Mm.390859	NM_008235	ENSMUSG00000022528	Hes1	Hry|bHLHb39	hairy and enhancer of split 1 (Drosophila)	protein-coding
common_peak2-25645-11-13--0.298661337805991-0.337263207250336	chr19	9981899	9982531	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-8192	NM_016692	16319	Mm.29755	NM_016692	ENSMUSG00000024660	Incenp	2700067E22Rik|AU019509|C130081E20|C77457	inner centromere protein	protein-coding
unique_peak1-4615-8-1-2.00522241794757-2.05605744720049	chr3	68677833	68678286	+	0	NA	Intergenic	Intergenic	4551	NM_001167996	68725	Mm.45741	NM_001167996	ENSMUSG00000046999	1110032F04Rik	AI115547	RIKEN cDNA 1110032F04 gene	protein-coding
unique_peak1-1421-9-2-1.60465090568306-1.87199725847353	chr12	80818563	80819095	+	0	NA	intron (NM_009014, intron 8 of 10)	intron (NM_009014, intron 8 of 10)	395171	NM_007564	12192	Mm.235132	NM_007564	ENSMUSG00000021127	Zfp36l1	AW742437|AW743212|Berg36|Brf1|D530020L18Rik|ERF1|TIS11b|cMG1	zinc finger protein 36, C3H type-like 1	protein-coding
unique_peak1-6658-10-4-1.03448725012141-1.5150158574804	chr8	14992993	14993533	+	0	NA	intron (NM_172751, intron 27 of 28)	intron (NM_172751, intron 27 of 28)	-17762	NM_029116	74901	Mm.46675	NM_029116	ENSMUSG00000055675	Kbtbd11	2900016B01Rik|4930465M17Rik|mKIAA0711	kelch repeat and BTB (POZ) domain containing 11	protein-coding
unique_peak2-32855-6-15--1.4346018896197-1.16633110333236	chr10	59702590	59703327	+	0	NA	Intergenic	Intergenic	-20950	NM_016803	53374	Mm.12866	NM_016803	ENSMUSG00000057337	Chst3	C6ST|C6ST-1|GST-0	carbohydrate (chondroitin 6/keratan) sulfotransferase 3	protein-coding
common_peak1-11486-13-30--1.17572427974911-1.59386218057211	chr15	102257044	102257736	+	0	NA	intron (NM_013672, intron 4 of 5)	PB1D10|SINE|Alu	-18408	NM_144547	110542	Mm.60331	NM_144547	ENSMUSG00000023047	Amhr2	Misiir|Misrii|Mrii	anti-Mullerian hormone type 2 receptor	protein-coding
unique_peak1-1448-22-6-1.8399291830298-3.01815507148775	chr12	102263404	102264559	+	0	NA	intron (NM_026681, intron 2 of 29)	intron (NM_026681, intron 2 of 29)	3212	NM_026681	68339	Mm.156217	NM_026681	ENSMUSG00000021182	Ccdc88c	0610010D24Rik|AV000935|AW324073|Daple|mKIAA1509	coiled-coil domain containing 88C	protein-coding
common_peak1-19313-24-34--0.33607311417725-0.427313034957882	chr9	122950441	122951297	+	0	NA	intron (NM_177911, intron 3 of 13)	intron (NM_177911, intron 3 of 13)	7010	NM_177911	331046	Mm.195309	NM_177911	ENSMUSG00000025787	Tgm4	9530008N10Rik|Eapa1|TGP	transglutaminase 4 (prostate)	protein-coding
common_peak1-18468-28-21-0.593527501184165-0.884951936461256	chr8	84659876	84660920	+	0	NA	Intergenic	Intergenic	266087	NM_001254747	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak2-25054-21-24--0.0743669245084888-0.301029995663979	chr18	32837206	32837816	+	0	NA	intron (NR_045381, intron 4 of 4)	Lx5|LINE|L1	-117823	NM_001048207	71683	Mm.292145	NM_027863	ENSMUSG00000090523	Gypc	0610037F22Rik|Cd236r	glycophorin C	protein-coding
common_peak1-11208-20-15-0.488074784591193-0.590343908676236	chr15	78832563	78833340	+	0	NA	TTS (NR_105921)	TTS (NR_105921)	298	NR_105921	102465577		NR_105921		Mir6956	mmu-mir-6956	microRNA mir-6956	ncRNA
unique_peak2-39441-5-6--0.511735258063458-0.947717972411649	chr9	46283014	46283328	+	0	NA	Intergenic	Intergenic	-155102	NM_183104	74361	Mm.159169	NM_183104	ENSMUSG00000056617	4931429L15Rik	-	RIKEN cDNA 4931429L15 gene	protein-coding
common_peak1-10137-13-14--0.12841856497075-0.301029995663977	chr13	33951730	33952352	+	0	NA	Intergenic	Intergenic	-16764	NM_001045535	435350	Mm.263418	NM_001045535	ENSMUSG00000069248	Serpinb6e	Gm11396|OTTMUSG00000000720|SPI3B|ovalbumin	serine (or cysteine) peptidase inhibitor, clade B, member 6e	protein-coding
common_peak2-27271-17-15-0.218296338205038-0.403453972741633	chr3	57306233	57306914	+	0	NA	intron (NM_133784, intron 2 of 6)	B1_Mus1|SINE|Alu	73225	NM_133784	97064	Mm.405029	NM_133784	ENSMUSG00000027803	Wwtr1	2310058J06Rik|2610021I22Rik|C78399|Taz	WW domain containing transcription regulator 1	protein-coding
common_peak2-27854-11-9-0.186765489364251-0.344532117358383	chr3	152513137	152513617	+	0	NA	intron (NM_012028, intron 2 of 4)	ORR1E|LTR|MaLR	131794	NM_012028	26938	Mm.40915	NM_012028		St6galnac5	AI851940|Siat7e	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	protein-coding
common_peak2-26989-8-8--0.164702583494742-1.00793137938329	chr2	168080238	168080736	+	0	NA	Intergenic	Intergenic	14344	NM_001081134	241794	Mm.425102	NM_001081134	ENSMUSG00000074575	Kcng1	AW536275|OTTMUSG00000016048	potassium voltage-gated channel, subfamily G, member 1	protein-coding
common_peak1-11528-37-30-0.571796761098944-1.03797455172871	chr16	4077191	4078480	+	0	NA	promoter-TSS (NM_026508)	promoter-TSS (NM_026508)	-25	NM_026508	68015	Mm.123366	NM_026508	ENSMUSG00000005981	Trap1	2410002K23Rik|HSP75	TNF receptor-associated protein 1	protein-coding
common_peak1-12745-62-41-1.01843403602332-3.70886757573671	chr18	57354339	57355613	+	0	NA	intron (NM_001001979, intron 4 of 24)	intron (NM_001001979, intron 4 of 24)	62232	NM_001001979	70417	Mm.297863	NM_001001979	ENSMUSG00000024593	Megf10	3000002B06Rik|Gm331	multiple EGF-like-domains 10	protein-coding
common_peak2-26288-18-21--0.146512467408946-0.306326795069975	chr2	30967262	30967977	+	0	NA	intron (NM_001038700, intron 1 of 14)	ID_B1|SINE|B4	-15599	NM_001177650	14269	Mm.52297	NM_019406	ENSMUSG00000075415	Fnbp1	1110057E06Rik|2210010H06Rik|FBP1|Fbp17	formin binding protein 1	protein-coding
common_peak2-20487-24-51--0.907229815373375-1.77636329975052	chr10	52417524	52418751	+	0	NA	intron (NM_178675, intron 1 of 7)	ORR1B1|LTR|MaLR	7830	NM_178675	215085	Mm.338690	NM_178675	ENSMUSG00000038602	Slc35f1	Duf6|E130016L02	solute carrier family 35, member F1	protein-coding
common_peak1-11104-52-30-1.15406367987882-3.72934020370118	chr15	61610191	61612433	+	0	NA	Intergenic	Lx7|LINE|L1	-5306	NR_040350	432956	Mm.404918	NR_040350		D030024E09Rik	-	RIKEN cDNA D030024E09 gene	ncRNA
common_peak1-9516-12-11-0.0638134843664826-0.337263207250336	chr11	115420204	115420747	+	0	NA	Intergenic	B3A|SINE|B2	-5283	NM_001002929	445007	Mm.4379	NM_001002929	ENSMUSG00000020739	Nup85	Pcnt1|frount	nucleoporin 85	protein-coding
common_peak1-7724-13-9-0.456543935750406-0.53895475198017	chr1	88435284	88436097	+	0	NA	Intergenic	(TTTG)n|Simple_repeat|Simple_repeat	12379	NM_008972	19231	Mm.19187	NM_008972	ENSMUSG00000026238	Ptma	Thym	prothymosin alpha	protein-coding
common_peak1-18884-7-11--0.785871670422967-1.21681515183528	chr9	32695954	32696347	+	0	NA	Intergenic	Intergenic	192523	NM_001038642	23871	Mm.292415	NM_011808	ENSMUSG00000032035	Ets1	AI196000|AI448617|D230050P06|Ets-1|Tpl1	E26 avian leukemia oncogene 1, 5' domain	protein-coding
common_peak1-12494-26-61--1.02629721822841-2.64075047711343	chr17	87282155	87283190	+	0	NA	Intergenic	Intergenic	-34016	NM_001277980	78469	Mm.67234	NM_030104	ENSMUSG00000037689	Tmem247	1700090G07Rik	transmembrane protein 247	protein-coding
common_peak1-12718-9-12--0.510826311736872-0.394412252720706	chr18	50053413	50053917	+	0	NA	exon (NM_001081371, exon 24 of 43)	exon (NM_001081371, exon 24 of 43)	61014	NM_001081371	240283	Mm.257790	NM_001081371	ENSMUSG00000037416	Dmxl1	C630007L23Rik|D030030C22	Dmx-like 1	protein-coding
common_peak1-9266-9-10--0.269818212233077-1.05503135781948	chr11	87404019	87404418	+	0	NA	TTS (NM_001284392)	TTS (NM_001284392)	-1501	NM_133215	170749	Mm.399376	NM_133215	ENSMUSG00000018401	Mtmr4	AA596759|ESTM44|FYVE-DSP2|ZFYVE11|mKIAA0647	myotubularin related protein 4	protein-coding
unique_peak2-33417-5-7--0.704380336005853-1.01466476204226	chr11	59459469	59459887	+	0	NA	Intergenic	Intergenic	-16319	NM_201245	26936	Mm.2402	NM_012027	ENSMUSG00000005417	Mprip	9530046C02|AA536749|AI647711|C76423|RIP3|Rhoip3|mKIAA0864|p116Rip	myosin phosphatase Rho interacting protein	protein-coding
unique_peak2-38310-2-10--2.37688587490062-2.09384600808989	chr6	142169494	142170071	+	0	NA	Intergenic	Intergenic	-35112	NM_023718	28254	Mm.38953	NM_023718	ENSMUSG00000079262	Slco1a6	4930422F19Rik|AI790453|Oatp-5|Oatp5|Slc21a13	solute carrier organic anion transporter family, member 1a6	protein-coding
common_peak1-10785-12-10-0.189344366450341-0.386243247519795	chr14	75786937	75787458	+	0	NA	Intergenic	Intergenic	-68592	NM_001128093	380918	Mm.484360	NM_001128093	ENSMUSG00000091722	Siah3	Gm912	seven in absentia homolog 3 (Drosophila)	protein-coding
common_peak1-11258-10-8-0.186490343566457-1.078512453669	chr15	80233153	80233749	+	0	NA	Intergenic	Intergenic	115783	NM_001044308	239556	Mm.291058	NM_001044308	ENSMUSG00000022416	Cacna1i	Ca(V)3.3	calcium channel, voltage-dependent, alpha 1I subunit	protein-coding
common_peak2-22487-13-19--0.543456064249594-0.466170754204149	chr13	49420534	49421107	+	0	NA	Intergenic	B3A|SINE|B2	-16098	NM_001039179	76895	Mm.197387	NM_029791	ENSMUSG00000037933	Bicd2	-	bicaudal D homolog 2 (Drosophila)	protein-coding
common_peak2-22739-10-19--0.965512749878593-0.917676348953458	chr13	109822209	109822829	+	0	NA	intron (NM_011056, intron 2 of 16)	intron (NM_011056, intron 2 of 16)	-292419	NR_030644	100124489		NR_030644		Mir582	Mirn582|mmu-mir-582	microRNA 582	ncRNA
unique_peak1-1796-9-2-1.60465090568306-1.87199725847353	chr14	24793354	24793880	+	0	NA	intron (NM_001253378, intron 1 of 27)	intron (NM_001253378, intron 1 of 27)	29810	NM_001253375	16531	Mm.343607	NM_010610	ENSMUSG00000063142	Kcnma1	5730414M22Rik|BKCa|MaxiK|Slo|Slo1|mSlo|mSlo1	potassium large conductance calcium-activated channel, subfamily M, alpha member 1	protein-coding
unique_peak2-34804-4-10--1.48289213249054-1.5150158574804	chr15	73060519	73060983	+	0	NA	intron (NM_007982, intron 25 of 31)	PB1D10|SINE|Alu	-45374	NM_153178	239528	Mm.23095	NM_153178		Ago2	1110029L17Rik|2310051F07Rik|AI225898|AL022874|AW546247|ENSMUSG00000072493|Eif2c2|Gerp95|Gm10365|mKIAA4215	argonaute RISC catalytic subunit 2	protein-coding
unique_peak1-1231-10-3-1.35641534500877-1.75805390616669	chr11	110956607	110957145	+	0	NA	Intergenic	(ATTG)n|Simple_repeat|Simple_repeat	29398	NM_008425	16518	Mm.4951	NM_008425	ENSMUSG00000041695	Kcnj2	IRK1|Kcnf1|Kir2.1	potassium inwardly-rectifying channel, subfamily J, member 2	protein-coding
common_peak1-17719-21-18-0.32156175182265-0.48779450977742	chr7	79781191	79781881	+	0	NA	Intergenic	Intergenic	-330055	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding
common_peak1-18038-18-18-0.0649916377847664-0.323898164595606	chr7	143614915	143615685	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-74202	NR_040459	330664	Mm.127762	NR_040459		C230079O03Rik	C230079O03	RIKEN cDNA C230079O03 gene	ncRNA
common_peak2-30697-70-95-0.0350044156542424-0.311156440617038	chr7	111081961	111083017	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-3407	NM_147119	259123	Mm.377861	NM_147119	ENSMUSG00000073938	Olfr632	MOR2-1	olfactory receptor 632	protein-coding
unique_peak1-6067-11-5-0.923731083530457-1.477227296591	chr6	118130273	118130852	+	0	NA	intron (NM_001080780, intron 3 of 18)	intron (NM_001080780, intron 3 of 18)	17200	NM_009050	19713	Mm.57199	NM_009050	ENSMUSG00000030110	Ret	PTC|RET51|RET9|c-Ret	ret proto-oncogene	protein-coding
unique_peak2-35038-2-4--1.23938235115068-0.931118710592187	chr16	33832783	33833188	+	0	NA	intron (NM_010580, intron 1 of 14)	intron (NM_010580, intron 1 of 14)	3234	NM_001145884	16419	Mm.6424	NM_010580	ENSMUSG00000022817	Itgb5	AA475909|AI874634|ESTM23|[b]-5|[b]5|[b]5A|[b]5B|beta-5|beta5	integrin beta 5	protein-coding
unique_peak1-6594-11-3-1.50869358425161-1.95434855131066	chr7	144773507	144774060	+	0	NA	Intergenic	Intergenic	144426	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
common_peak2-23446-7-6--0.00826409175941478-0.97990265578305	chr15	64185484	64185830	+	0	NA	intron (NM_001276467, intron 1 of 29)	Lx8|LINE|L1	28824	NM_001276461	13196	Mm.277236	NM_010026	ENSMUSG00000022377	Asap1	AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19	ArfGAP with SH3 domain, ankyrin repeat and PH domain1	protein-coding
unique_peak2-37422-7-8--0.370834171144123-1.00793137938329	chr4	149457025	149457470	+	0	NA	Intergenic	MTC-int|LTR|MaLR	-4365	NM_177366	269604	Mm.219307	NM_177366	ENSMUSG00000047875	Gpr157	F730108M23Rik	G protein-coupled receptor 157	protein-coding
unique_peak2-34691-7-15--1.20090916970181-0.947446088118041	chr15	25580527	25581214	+	0	NA	intron (NM_019472, intron 1 of 40)	intron (NM_019472, intron 1 of 40)	28565	NM_019472	17909	Mm.60590	NM_019472	ENSMUSG00000022272	Myo10	AW048724|D15Ertd600e|mKIAA0799	myosin X	protein-coding
unique_peak1-5711-12-4-1.32684789020028-2.04196296489515	chr6	38840559	38841194	+	0	NA	Intergenic	Lx8|LINE|L1	-14687	NM_001294143	15258	Mm.23790	NM_010433	ENSMUSG00000061436	Hipk2	1110014O20Rik|B230339E18Rik|Stank	homeodomain interacting protein kinase 2	protein-coding
common_peak2-28382-22-21-0.187852486450107-0.376654945067947	chr4	139092528	139093064	+	0	NA	intron (NM_183148, intron 4 of 11)	intron (NM_183148, intron 4 of 11)	6333	NM_183148	212632	Mm.30464	NM_183148	ENSMUSG00000041025	Iffo2	C79267	intermediate filament family orphan 2	protein-coding
unique_peak2-36187-4-8--1.19338551529556-1.21878474469819	chr2	30772775	30773226	+	0	NA	Intergenic	Intergenic	-14183	NM_022415	64292	Mm.28768	NM_022415	ENSMUSG00000050737	Ptges	2410099E23Rik|D2Ertd369e|Pges|mPGES|mPGES-1	prostaglandin E synthase	protein-coding
unique_peak1-3603-14-3-1.89921616035764-2.80787975886178	chr19	32279986	32280708	+	0	NA	intron (NM_144792, intron 5 of 9)	MERVL-int|LTR|ERVL	5156	NM_001168526	208449	Mm.329810	NM_144792	ENSMUSG00000040451	Sgms1	9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23	sphingomyelin synthase 1	protein-coding
unique_peak2-38332-2-5--1.50241675698448-1.08602067057793	chr6	148869224	148869646	+	0	NA	TTS (NM_019643)	TTS (NM_019643)	-24676	NM_181541	232560	Mm.150568	NM_181541	ENSMUSG00000030309	Caprin2	C1qdc1|Eeg1|rng140	caprin family member 2	protein-coding
common_peak1-17596-17-21--0.24113528043226-0.322753776620787	chr7	44553604	44554214	+	0	NA	Intergenic	Intergenic	1965995	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak2-20202-20-41--0.904242638187568-1.56490221051684	chr1	177442243	177443286	+	0	NA	Intergenic	Intergenic	-20088	NM_001199003	24012	Mm.7956	NM_011880		Rgs7	-	regulator of G protein signaling 7	protein-coding
common_peak2-23894-9-9--0.132314688483142-1.03275496310833	chr16	4003335	4003794	+	0	NA	Intergenic	CpG	-1886	NM_177472	52864	Mm.29935	NM_177472	ENSMUSG00000039738	Slx4	AI256635|AI426760|Btbd12|D16Bwg1016e	SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae)	protein-coding
common_peak2-24527-8-5-0.420259917226415-1.10484139239135	chr17	26953202	26953504	+	0	NA	Intergenic	Intergenic	25157	NM_008700	18091	Mm.41974	NM_008700	ENSMUSG00000015579	Nkx2-5	Csx|Nkx-2.5|Nkx2.5|tinman	NK2 homeobox 5	protein-coding
common_peak1-15526-18-14-0.406028555619833-0.532159081577619	chr4	118061878	118062861	+	0	NA	intron (NM_198170, intron 18 of 71)	intron (NM_198170, intron 18 of 71)	19499	NM_198170	230676	Mm.415218	NM_198170	ENSMUSG00000033253	Szt2	6430407N22|ENSMUSG00000058432|TIGR	seizure threshold 2	protein-coding
unique_peak1-350-11-0-3.50869358425161-3.61235994796777	chr1	135846198	135846761	+	0	NA	Intergenic	B3|SINE|B2	-28501	NM_054077	116847	Mm.214514	NM_054077	ENSMUSG00000041577	Prelp	7330409J17Rik|SLRR2A	proline arginine-rich end leucine-rich repeat	protein-coding
common_peak1-10486-51-118--0.819893937705371-3.3938980820212	chr13	119428271	119429816	+	0	NA	Intergenic	Intergenic	-74463	NM_008002	14165	Mm.317323	NM_008002	ENSMUSG00000021732	Fgf10	AEY17|BB213776|Fgf-10|Gsfaey17	fibroblast growth factor 10	protein-coding
unique_peak1-2848-13-7-0.778472030637769-0.817533494790411	chr17	31304986	31305540	+	0	NA	Intergenic	RLTR18B|LTR|ERVK	-3265	NM_009362	21784	Mm.2854	NM_009362	ENSMUSG00000024032	Tff1	Bcei|PS2	trefoil factor 1	protein-coding
common_peak1-10098-23-17-0.551842503066768-0.713114929964887	chr13	24831492	24832372	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	21874	NM_020567	57441	Mm.12239	NM_020567	ENSMUSG00000006715	Gmnn	AW546347|Gem	geminin	protein-coding
unique_peak1-5202-9-0-3.18961340640422-3.01029995663981	chr5	35084466	35084903	+	0	NA	intron (NM_019497, intron 11 of 15)	L1_Mur3|LINE|L1	-19705	NM_010414	15194	Mm.209071	NM_010414	ENSMUSG00000029104	Htt	AI256365|C430023I11Rik|Hd|Hdh|IT15	huntingtin	protein-coding
common_peak2-20998-19-42--1.02357742804041-1.85054049304327	chr11	23497404	23497959	+	0	NA	intron (NM_027860, intron 12 of 21)	L1ME3B|LINE|L1	35950	NM_027860	71675	Mm.48031	NM_027860	ENSMUSG00000042208	0610010F05Rik	Kiaa1841|mKIAA1841	RIKEN cDNA 0610010F05 gene	protein-coding
unique_peak2-35771-5-8--0.874305337448166-1.10484139239135	chr18	44535126	44535458	+	0	NA	Intergenic	(CAAA)n|Simple_repeat|Simple_repeat	-4862	NM_027490	70640	Mm.87629	NM_027490	ENSMUSG00000024472	Dcp2	2410015D23Rik|5730537H01Rik|AL118268	DCP2 decapping enzyme homolog (S. cerevisiae)	protein-coding
common_peak2-32231-17-13-0.410941416147434-0.546772548767014	chr9	123284942	123285425	+	0	NA	intron (NM_153168, intron 2 of 20)	MTEa|LTR|MaLR	9125	NM_153168	102436	Mm.276076	NM_153168	ENSMUSG00000035202	Lars2	AI035546|Kiaa0028|LEURS	leucyl-tRNA synthetase, mitochondrial	protein-coding
common_peak1-7655-24-22-0.269647946710704-0.457753417732779	chr1	74295401	74296606	+	0	NA	intron (NM_029711, intron 3 of 9)	intron (NM_029711, intron 3 of 9)	12879	NM_029711	76709	Mm.337038	NM_029711	ENSMUSG00000006304	Arpc2	2210023N03Rik|34kDa|p34-Arc	actin related protein 2/3 complex, subunit 2	protein-coding
common_peak2-27266-40-35-0.489050681308786-0.951203349073949	chr3	57287755	57288560	+	0	NA	intron (NM_133784, intron 3 of 6)	L1Md_T|LINE|L1	58825	NM_145539	229302	Mm.26618	NM_145539	ENSMUSG00000027801	Tm4sf4	Iltmp	transmembrane 4 superfamily member 4	protein-coding
unique_peak1-5550-11-3-1.50869358425161-1.95434855131066	chr5	144219618	144220186	+	0	NA	Intergenic	MYSERV6-int|LTR|ERVK	-5459	NM_144915	231871	Mm.469963	NM_144915	ENSMUSG00000039206	Daglb	E330036I19Rik	diacylglycerol lipase, beta	protein-coding
unique_peak2-36103-5-10--1.16381195464315-1.33892459842472	chr2	12418931	12419398	+	0	NA	Intergenic	L1Md_A|LINE|L1	-78077	NM_024185	66960	Mm.34059	NM_024185	ENSMUSG00000026767	Fam188a	1810041E18Rik|2310047O13Rik|5830410F13Rik|AI447827|AW111958	family with sequence similarity 188, member A	protein-coding
unique_peak1-1049-9-6-0.382258484346616-1.11707584880836	chr11	78826646	78827172	+	0	NA	Intergenic	Intergenic	-10190	NR_045873	790910	Mm.440410	NR_045873		Gm11201	ENSMUSG00000072637|OTTMUSG00000000169	predicted gene 11201	ncRNA
common_peak2-23831-85-112-0.135224285709463-0.433583770595803	chr15	101369594	101371406	+	0	NA	intron (NM_016879, intron 2 of 3)	intron (NM_016879, intron 2 of 3)	-7249	NM_008474	16680	Mm.25292	NM_008474	ENSMUSG00000044294	Krt84	AV235125|HRb-1|Krt2-16|Krt2-3	keratin 84	protein-coding
common_peak1-12935-36-16-1.39185824491742-3.4192226378953	chr19	9027451	9028860	+	0	NA	promoter-TSS (NM_197993)	promoter-TSS (NM_197993)	-185	NM_197993	70044	Mm.165979	NM_197993	ENSMUSG00000071645	Tut1	2700038E08Rik|PAPD2|Rbm21|TUTase6	terminal uridylyl transferase 1, U6 snRNA-specific	protein-coding
common_peak1-14650-19-35--0.767237674780626-1.06916698217164	chr3	57410646	57411441	+	0	NA	Intergenic	Lx6|LINE|L1	-31211	NM_001168281	97064	Mm.405029	NM_133784	ENSMUSG00000027803	Wwtr1	2310058J06Rik|2610021I22Rik|C78399|Taz	WW domain containing transcription regulator 1	protein-coding
unique_peak1-3775-9-1-2.18961340640422-2.31132995230379	chr19	55620916	55621284	+	0	NA	intron (NM_001293686, intron 7 of 7)	(TATG)n|Simple_repeat|Simple_repeat	155594	NR_045318	77594	Mm.329924	NR_045318	ENSMUSG00000097632	4930552P12Rik	-	RIKEN cDNA 4930552P12 gene	ncRNA
common_peak2-30056-31-17-1.05531366937081-1.94848218498813	chr6	128296289	128296925	+	0	NA	intron (NM_011657, intron 1 of 10)	intron (NM_011657, intron 1 of 10)	9262	NM_011657	22158	Mm.291783	NM_011657	ENSMUSG00000001521	Tulp3	2310022L06Rik|AI316887	tubby-like protein 3	protein-coding
unique_peak1-4058-16-7-1.11826364226806-1.23399803405144	chr2	60875722	60876714	+	0	NA	Intergenic	L1Md_T|LINE|L1	-63010	NR_045335	100038493	Mm.388076	NR_045335	ENSMUSG00000075325	Gm13582	ENSMUSG00000075325|OTTMUSG00000012844	predicted gene 13582	ncRNA
common_peak1-13364-26-13-1.12054417010086-1.80107744087171	chr19	45790340	45791315	+	0	NA	Intergenic	Intergenic	14221	NR_045307	71232	Mm.50944	NR_045307		4933429K18Rik	-	RIKEN cDNA 4933429K18 gene	ncRNA
unique_peak2-33254-0-7--3.84013093047421-1.80617997398389	chr10	128093188	128093598	+	0	NA	Intergenic	B4|SINE|B4	-10344	NM_011772	22781	Mm.358648	NM_011772	ENSMUSG00000002578	Ikzf4	A630026H08Rik|Eos|Zfpn1a4|Znfn1a4	IKAROS family zinc finger 4	protein-coding
common_peak1-11906-152-192-0.371159953421763-1.958483105936	chr17	25754601	25758477	+	0	NA	intron (NM_029624, intron 4 of 10)	intron (NM_029624, intron 4 of 10)	40420	NR_045520	76483	Mm.12787	NM_029624	ENSMUSG00000002279	Lmf1	2400010G15Rik|AW822050|Tmem112|cld	lipase maturation factor 1	protein-coding
common_peak1-7500-36-32-0.434926966809301-0.779916249636873	chr1	13588715	13589926	+	0	NA	Intergenic	L2|LINE|L2	-9375	NM_028173	72265	Mm.28765	NM_028173	ENSMUSG00000025935	Tram1	1810049E02Rik|TRAMP	translocating chain-associating membrane protein 1	protein-coding
unique_peak2-37937-4-8--1.19338551529556-1.21878474469819	chr5	147076093	147076564	+	0	NA	intron (NM_153599, intron 2 of 12)	intron (NM_153599, intron 2 of 12)	33077	NM_153599	264064	Mm.260576	NM_153599	ENSMUSG00000029635	Cdk8	-	cyclin-dependent kinase 8	protein-coding
common_peak1-8090-16-10-0.658832023630764-0.699649909729472	chr1	180782941	180783843	+	0	NA	intron (NM_001161665, intron 5 of 14)	intron (NM_001161665, intron 5 of 14)	324136	NM_001161665	269152	Mm.129727	NM_177724	ENSMUSG00000026494	Kif26b	4832420M10|BC056349|D230039L06Rik	kinesin family member 26B	protein-coding
common_peak1-13178-47-15-1.93484142476655-6.78396547427843	chr19	16258643	16260583	+	0	NA	intron (NM_008139, intron 1 of 6)	intron (NM_008139, intron 1 of 6)	21025	NR_033228	595139	Mm.405662	NR_033228		E030024N20Rik	9030417F11Rik|Ppia-ps8	peptidylprolyl isomerase A pseudogene 8	pseudo
common_peak2-23995-57-83--0.126284382699832-0.34989958244832	chr16	20097504	20098245	+	0	NA	intron (NM_029436, intron 1 of 7)	CpG	247	NM_029436	75785	Mm.392450	NM_029436	ENSMUSG00000062901	Klhl24	1110046J11Rik|4930429H24Rik|6530402O20Rik|C85082	kelch-like 24	protein-coding
common_peak2-28740-27-19-0.669617856007873-1.02859851787301	chr5	36715208	36716132	+	0	NA	intron (NM_030889, intron 1 of 26)	intron (NM_030889, intron 1 of 26)	25118	NM_030889	81840	Mm.34113	NM_030889	ENSMUSG00000029093	Sorcs2	N28137|mKIAA1329	sortilin-related VPS10 domain containing receptor 2	protein-coding
common_peak1-18139-23-19-0.399839409621718-0.538442145997695	chr8	10946304	10947170	+	0	NA	Intergenic	Intergenic	-18280	NR_030715	665306	Mm.358758	NR_030715	ENSMUSG00000038917	3930402G23Rik	-	RIKEN cDNA 3930402G23 gene	ncRNA
common_peak2-22316-11-30--1.44550272613526-2.2880788707084	chr13	21717465	21718293	+	0	NA	Intergenic	Lx7|LINE|L1	13511	NM_146542	218066	Mm.484775	NM_146542	ENSMUSG00000036658	Olfr11	M49|MOR256-11|ORL121	olfactory receptor 11	protein-coding
common_peak2-28435-9-11--0.395349094316936-0.344532117358383	chr4	149136797	149137325	+	0	NA	intron (NM_027460, intron 1 of 6)	intron (NM_027460, intron 1 of 6)	11315	NM_027460	70556	Mm.41877	NM_027460	ENSMUSG00000028982	Slc25a33	5730438N18Rik|Pnc1	solute carrier family 25, member 33	protein-coding
common_peak1-15965-9-11--0.395349094316936-0.344532117358383	chr5	31494767	31495281	+	0	NA	promoter-TSS (NM_153680)	promoter-TSS (NM_153680)	488	NM_001127355	13667	Mm.29394	NM_010122	ENSMUSG00000029145	Eif2b4	Eif2b	eukaryotic translation initiation factor 2B, subunit 4 delta	protein-coding
common_peak2-23925-11-9-0.186765489364251-0.344532117358383	chr16	10991801	10992205	+	0	NA	intron (NM_019980, intron 1 of 3)	intron (NM_019980, intron 1 of 3)	1211	NM_019980	56722	Mm.294753	NM_019980	ENSMUSG00000022500	Litaf	3222402J11Rik|C85531|N4WBP3|TBX1	LPS-induced TN factor	protein-coding
common_peak2-25552-18-11-0.727956650507195-0.876666802405043	chr19	6241647	6242231	+	0	NA	exon (NM_194348, exon 1 of 40)	exon (NM_194348, exon 1 of 40)	271	NM_194348	329015	Mm.277384	NM_194348	ENSMUSG00000024773	Atg2a	1810013C15Rik|A830054M12|BC023754|mKIAA0404	autophagy related 2A	protein-coding
common_peak1-15521-52-64-0.0858921772372447-0.34185676619046	chr4	117288568	117290008	+	0	NA	intron (NM_001285901, intron 6 of 7)	intron (NM_001285901, intron 6 of 7)	65542	NM_023178	66233	Mm.29142	NM_023178	ENSMUSG00000009640	Dmap1	1500016M21Rik|DNMAP1|DNMTAP1|Dmtap1|mKIAA1425	DNA methyltransferase 1-associated protein 1	protein-coding
common_peak2-25744-63-53-0.683425088907121-2.11210046032967	chr19	27429427	27431088	+	0	NA	Intergenic	ORR1A3|LTR|MaLR	33148	NM_183179	240595	Mm.269759	NM_183179	ENSMUSG00000047298	Kcnv2	KV11.1	potassium channel, subfamily V, member 2	protein-coding
common_peak1-11419-16-13-0.310908720210457-0.417187467413082	chr15	99504886	99505650	+	0	NA	intron (NM_009597, intron 3 of 11)	intron (NM_009597, intron 3 of 11)	4119	NM_009597	11419	Mm.440107	NM_009597	ENSMUSG00000023017	Asic1	AI843610|ASIC|ASIC1a|Accn2|B530003N02Rik|BNaC2	acid-sensing (proton-gated) ion channel 1	protein-coding
common_peak1-12297-22-41--0.745033317691356-1.15174830603352	chr17	46282236	46282997	+	0	NA	Intergenic	URR1B|DNA|MER1_type	-1469	NM_029338	75564	Mm.17993	NM_029338	ENSMUSG00000023966	Rsph9	1700027N10Rik	radial spoke head 9 homolog (Chlamydomonas)	protein-coding
unique_peak1-5069-15-5-1.4272022498345-1.61682445937017	chr4	139534081	139534881	+	0	NA	Intergenic	Intergenic	-10540	NM_173427	242721	Mm.60400	NM_173427	ENSMUSG00000078234	Klhdc7a	B230308G19Rik	kelch domain containing 7A	protein-coding
unique_peak2-33139-0-5--3.42509343119537-1.32905871926422	chr10	83629353	83629671	+	0	NA	Intergenic	Intergenic	273704	NM_001004363	77976	Mm.25874	NM_001004363	ENSMUSG00000020032	Nuak1	AU014801|AW494241|B230104P22Rik|Omphk1	NUAK family, SNF1-like kinase, 1	protein-coding
common_peak1-12886-20-15-0.488074784591193-0.590343908676236	chr18	80169385	80170187	+	0	NA	Intergenic	Intergenic	-73848	NM_053117	93737	Mm.24678	NM_053117	ENSMUSG00000056214	Pard6g	2410049N21Rik|Par6a	par-6 family cell polarity regulator gamma	protein-coding
unique_peak2-34222-5-6--0.511735258063458-0.947717972411649	chr13	49371227	49371710	+	0	NA	intron (NM_015759, intron 11 of 17)	intron (NM_015759, intron 11 of 17)	-27393	NM_028340	66329	Mm.34308	NM_025491	ENSMUSG00000021384	Susd3	1700017I11Rik|2810440J20Rik	sushi domain containing 3	protein-coding
common_peak1-10630-29-19-0.790361985727748-1.34608670144205	chr14	41016461	41017729	+	0	NA	Intergenic	L1Md_F2|LINE|L1	548144	NR_045936	73591	Mm.65499	NR_045936		1700109I08Rik	-	RIKEN cDNA 1700109I08 gene	ncRNA
unique_peak1-6300-14-7-0.899216160357645-0.947446088118041	chr7	30551883	30552472	+	0	NA	Intergenic	Intergenic	-1394	NM_023750	74352	Mm.251083	NM_023750		Zfp84	2210410P13Rik|4633401C23Rik|AI415447|BB081605|C86188|KRAB18|Zfp69	zinc finger protein 84	protein-coding
common_peak2-32412-11-11--0.0762689164695427-0.301029995663976	chrX	158042672	158043287	+	0	NA	Intergenic	LTR16A|LTR|ERVL	-111989	NM_001103367	24004	Mm.328503	NM_198409	ENSMUSG00000043518	Rai2	3f8	retinoic acid induced 2	protein-coding
unique_peak2-39319-7-9--0.522837264589173-1.05908390183068	chr8	125253062	125253603	+	0	NA	Intergenic	Intergenic	-30323	NM_009824	12398	Mm.194339	NM_009824	ENSMUSG00000006362	Cbfa2t3	A630044F12Rik|AI465270|AW229127|Cbfa2t3h|ETO-2|Eto2|MTGR2	core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human)	protein-coding
unique_peak2-36258-9-11--0.395349094316936-0.344532117358383	chr2	57181680	57182308	+	0	NA	intron (NM_010274, intron 6 of 16)	intron (NM_010274, intron 6 of 16)	91201	NM_010274	14571	Mm.3711	NM_010274	ENSMUSG00000026827	Gpd2	AA408484|AI448216|AU021455|AW494132|GPDH|Gdm1|Gpd-m|Gpdh-m|TISP38	glycerol phosphate dehydrogenase 2, mitochondrial	protein-coding
unique_peak2-39943-9-17--0.980311595038092-0.844317084070804	chrX	134059056	134059817	+	0	NA	Intergenic	Lx6|LINE|L1	-46652	NM_030688	60367	Mm.328321	NM_030688	ENSMUSG00000059203	Il1rapl2	-	interleukin 1 receptor accessory protein-like 2	protein-coding
unique_peak2-38587-5-14--1.61127093161437-1.95509489018123	chr7	70303933	70304468	+	0	NA	intron (NM_007390, intron 3 of 9)	intron (NM_007390, intron 3 of 9)	53212	NM_007390	11441	Mm.113464	NM_007390	ENSMUSG00000030525	Chrna7	Acra7|alpha7	cholinergic receptor, nicotinic, alpha polypeptide 7	protein-coding
unique_peak2-37392-1-7--2.62705701021674-1.80617997398389	chr4	140702819	140703281	+	0	NA	promoter-TSS (NM_172518)	promoter-TSS (NM_172518)	-787	NM_172518	213499	Mm.28865	NM_172518	ENSMUSG00000028920	Fbxo42	6720460I06Rik|mKIAA1332	F-box protein 42	protein-coding
common_peak2-29906-37-69--0.603289945459148-1.30667537457952	chr6	113697092	113698147	+	0	NA	3' UTR (NM_009723, exon 22 of 22)	3' UTR (NM_009723, exon 22 of 22)	-6944	NM_024206	110379	Mm.29296	NM_024206	ENSMUSG00000030298	Sec13	1110003H02Rik|Sec13l1|Sec13r	SEC13 homolog (S. cerevisiae)	protein-coding
common_peak2-19534-123-134-0.519007652955976-2.6253270772568	chr1	86441518	86443553	+	0	NA	Intergenic	Intergenic	1052850	NM_030194	109032	Mm.335802	NM_030194	ENSMUSG00000070034	Sp110	5031415C07Rik|52kDa|5830484A20Rik|ENSMUSG00000075603|Ifi75|Ipr1	Sp110 nuclear body protein	protein-coding
common_peak2-28545-13-65--2.26592208872068-8.05502012245455	chr5	3647007	3648074	+	0	NA	exon (NM_026033, exon 1 of 5)	exon (NM_026033, exon 1 of 5)	396	NM_026033	67210	Mm.178424	NM_026033	ENSMUSG00000007415	Gatad1	2310031E19Rik|2810047M21Rik|8430439A17Rik|9130430G15Rik|B330017N08Rik|ENSMUSG00000073241|Odag	GATA zinc finger domain containing 1	protein-coding
common_peak2-30772-9-7-0.18961340640422-1.05908390183068	chr7	125492138	125492581	+	0	NA	Intergenic	RMER6C|LTR|ERVK	94707	NM_138649	110058	Mm.156558	NM_138649	ENSMUSG00000058420	Syt17	Bk	synaptotagmin XVII	protein-coding
unique_peak1-7400-16-8-0.948338640825749-1.02063122982878	chrX	126752361	126753106	+	0	NA	intron (NM_172493, intron 23 of 26)	intron (NM_172493, intron 23 of 26)	468455	NM_172493	54004	Mm.10763	NM_017398	ENSMUSG00000034480	Diap2	Dia3|Diaph2|Drf2|E430022I22Rik	diaphanous homolog 2 (Drosophila)	protein-coding
common_peak1-14861-20-17-0.318149783148881-0.440610794044987	chr3	95229434	95230366	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-1371	NR_033637	100043305	Mm.412052	NR_033637		Gm4349	-	SET domain, bifurcated 1 pseudogene	pseudo
unique_peak1-5461-10-2-1.77145284428761-2.09384600808989	chr5	123228132	123228624	+	0	NA	intron (NM_001199676, intron 1 of 16)	intron (NM_001199676, intron 1 of 16)	1041	NM_001199676	207565	Mm.289237	NM_145358	ENSMUSG00000029471	Camkk2	6330570N16Rik|AW061083|mKIAA0787	calcium/calmodulin-dependent protein kinase kinase 2, beta	protein-coding
common_peak1-7996-51-51-0.374484107461481-0.773583383841042	chr1	163403289	163404246	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-21021	NM_183391	240873	Mm.276823	NM_183391	ENSMUSG00000066755	Tnfsf18	Gitrl	tumor necrosis factor (ligand) superfamily, member 18	protein-coding
common_peak2-24043-29-54--0.669069632909549-1.18863360106103	chr16	25058936	25060202	+	0	NA	promoter-TSS (NR_040374)	promoter-TSS (NR_040374)	-156	NR_040374	319487	Mm.137341	NR_040374	ENSMUSG00000096960	A230028O05Rik	-	RIKEN cDNA A230028O05 gene	ncRNA
common_peak1-13234-40-32-0.614581563392645-1.25391625579201	chr19	29047005	29048508	+	0	NA	Intergenic	L1Md_F3|LINE|L1	-9112	NM_198651	381218	Mm.280653	NM_198651	ENSMUSG00000064202	4430402I18Rik	AW122618|Spata6l	RIKEN cDNA 4430402I18 gene	protein-coding
unique_peak2-34774-2-5--1.50241675698448-1.08602067057793	chr15	59573959	59574390	+	0	NA	Intergenic	Intergenic	52340	NR_045076	100503021	Mm.402924	NR_045076		Gm19510	-	predicted gene, 19510	ncRNA
common_peak1-16524-10-19--0.965512749878593-0.917676348953458	chr5	142367345	142367954	+	0	NA	intron (NM_177879, intron 5 of 44)	(TAGA)n|Simple_repeat|Simple_repeat	-509802	NM_199068	17425	Mm.24214	NM_010812	ENSMUSG00000056493	Foxk1	A630048H08Rik|AI463295|ENSMUSG00000075577|Gm10868|Mnf	forkhead box K1	protein-coding
common_peak2-24601-45-56-0.0274680111801304-0.308649587997571	chr17	32388582	32389651	+	0	NA	intron (NM_020508, intron 2 of 19)	intron (NM_020508, intron 2 of 19)	10251	NR_102329	100043434		NR_102329		Gm4432	-	predicted gene 4432	pseudo
unique_peak1-1900-13-5-1.19350952991661-1.95509489018123	chr14	65882568	65883240	+	0	NA	Intergenic	Intergenic	-1604	NM_021458	14365	Mm.214687	NM_021458		Fzd3	AU020229|D930050A07Rik|Fz3	frizzled homolog 3 (Drosophila)	protein-coding
common_peak2-26770-13-8-0.608547029195456-0.660903317613904	chr2	143853130	143853637	+	0	NA	Intergenic	MTB_Mm|LTR|MaLR	-5455	NM_001044750	403171	Mm.389362	NM_207275	ENSMUSG00000037307	Banf2	4930517K23Rik|Baf-L|Baf-like|Gm115	barrier to autointegration factor 2	protein-coding
common_peak2-30418-18-30--0.641277159158523-0.738267116931589	chr7	39544372	39544943	+	0	NA	Intergenic	Intergenic	-231445	NM_001013810	434171	Mm.60990	NM_001013810	ENSMUSG00000060565	Gm5591	EG434171	predicted gene 5591	protein-coding
common_peak2-21237-14-23--0.685746340363512-0.669502273696327	chr11	67921609	67922310	+	0	NA	intron (NM_018768, intron 6 of 7)	RLTR24|LTR|ERV1	-112435	NR_105833	102465219		NR_105833	miRBase:MI0021943	Mir6406	mmu-mir-6406	microRNA mir-6406	ncRNA
unique_peak2-34349-6-6--0.241956811677302-0.947717972411649	chr13	100516260	100516698	+	0	NA	Intergenic	Intergenic	154159	NM_013732	27220	Mm.75498	NM_013732	ENSMUSG00000021647	Cartpt	Cart	CART prepropeptide	protein-coding
unique_peak1-4910-13-0-3.77847203063777-4.51544993495972	chr4	47294027	47294662	+	0	NA	intron (NM_009928, intron 19 of 39)	intron (NM_009928, intron 19 of 39)	-71833	NM_009370	21812	Mm.197552	NM_009370	ENSMUSG00000007613	Tgfbr1	ALK5|AU017191|Alk-5|TbetaR-I|TbetaRI	transforming growth factor, beta receptor I	protein-coding
common_peak2-23556-11-13--0.298661337805991-0.337263207250336	chr15	79300105	79300766	+	0	NA	Intergenic	(TTCTCC)n|Simple_repeat|Simple_repeat	-27948	NM_013767	27373	Mm.30199	NM_013767	ENSMUSG00000022433	Csnk1e	AI426939|AI551861|AW457082|CK1epsilon|CKIe|KC1epsilon|tau	casein kinase 1, epsilon	protein-coding
unique_peak2-33806-9-22--1.33394854965279-1.52222891542741	chr11	120783648	120784618	+	0	NA	intron (NM_027745, intron 1 of 18)	intron (NM_027745, intron 1 of 18)	10053	NM_027745	71276	Mm.275751	NM_027745	ENSMUSG00000048445	Ccdc57	4933434G05Rik	coiled-coil domain containing 57	protein-coding
unique_peak1-2806-15-8-0.842239749113344-0.891319708951327	chr17	23749100	23749913	+	0	NA	Intergenic	Intergenic	11713	NM_001289482	332221	Mm.270315	NM_001033425	ENSMUSG00000023902	Zscan10	BC068284|Zfp206|Zkscan10|Znf206	zinc finger and SCAN domain containing 10	protein-coding
common_peak2-20405-15-17--0.157760250886656-0.307611222530528	chr10	24132019	24132964	+	0	NA	Intergenic	Intergenic	-182757	NM_010217	14219	Mm.390287	NM_010217	ENSMUSG00000019997	Ctgf	Ccn2|Fisp12|Hcs24|fisp-12	connective tissue growth factor	protein-coding
unique_peak2-32886-4-5--0.608423014574403-0.909929411522249	chr10	12874518	12874916	+	0	NA	intron (NM_029172, intron 4 of 5)	intron (NM_029172, intron 4 of 5)	23112	NM_029172	75122	Mm.159433	NM_029172	ENSMUSG00000019815	Zc2hc1b	4930519B02Rik|Fam164b	zinc finger, C2HC-type containing 1B	protein-coding
common_peak1-10136-61-87--0.076682288887957-0.321469269268128	chr13	33935216	33936687	+	0	NA	promoter-TSS (NM_001045535)	promoter-TSS (NM_001045535)	-674	NM_001045535	435350	Mm.263418	NM_001045535	ENSMUSG00000069248	Serpinb6e	Gm11396|OTTMUSG00000000720|SPI3B|ovalbumin	serine (or cysteine) peptidase inhibitor, clade B, member 6e	protein-coding
common_peak1-7764-40-65--0.385418436607355-0.66882990514363	chr1	92179515	92181407	+	0	NA	Intergenic	Intergenic	79906	NM_007722	12778	Mm.6522	NM_007722		Ackr3	AW541270|CXC-R7|CXCR-7|Cmkor1|Cxcr7|RDC-1|Rdc1	atypical chemokine receptor 3	protein-coding
unique_peak1-4190-20-11-0.903112283870037-1.11267835143409	chr2	117731430	117732450	+	0	NA	intron (NR_040631, intron 5 of 5)	B3|SINE|B2	84276	NR_040631	73938	Mm.399107	NR_040631	ENSMUSG00000086221	4930412B13Rik	-	RIKEN cDNA 4930412B13 gene	ncRNA
common_peak1-8996-15-20--0.380152672223105-0.397739447719386	chr11	59948175	59948712	+	0	NA	intron (NM_009021, intron 1 of 5)	intron (NM_009021, intron 1 of 5)	-5141	NM_001037764	19377	Mm.296366	NM_009021	ENSMUSG00000062115	Rai1	Gt1	retinoic acid induced 1	protein-coding
common_peak2-29498-59-94--0.24449160745837-0.545897237751466	chr6	31398588	31399521	+	0	NA	intron (NM_013791, intron 6 of 17)	intron (NM_013791, intron 6 of 17)	50226	NM_013791	27418	Mm.238038	NM_013791		Mkln1	A130067F06Rik|AU015903|BB154892	muskelin 1, intracellular mediator containing kelch motifs	protein-coding
common_peak1-10023-60-81--0.00326014299755251-0.302362195683184	chr13	9093843	9094994	+	0	NA	intron (NM_172585, intron 1 of 17)	intron (NM_172585, intron 1 of 17)	1267	NM_172585	217980	Mm.234944	NM_172585	ENSMUSG00000033499	Larp4b	A630096F19|AI256361|D13Wsu64e|Larp5	La ribonucleoprotein domain family, member 4B	protein-coding
unique_peak1-1955-7-2-1.21412832957703-1.45399745587252	chr14	101835097	101835604	+	0	NA	Intergenic	RSINE1|SINE|B4	173058	NM_001081278	210789	Mm.320639	NM_173380	ENSMUSG00000033083	Tbc1d4	5930406J04Rik|A930035N22|AV295684|As160	TBC1 domain family, member 4	protein-coding
common_peak1-10119-24-37--0.454717610675869-0.572500200098104	chr13	30973628	30974374	+	0	NA	intron (NM_025588, intron 13 of 27)	AT_rich|Low_complexity|Low_complexity	65629	NM_153072	210554	Mm.450571	NM_153072	ENSMUSG00000076430	Hus1b	-	Hus1 homolog b (S. pombe)	protein-coding
unique_peak1-6220-9-4-0.867685311516858-1.36011389749466	chr7	144981569	144982025	+	0	NA	Intergenic	Intergenic	352440	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
common_peak1-16851-55-34-1.07533685420774-3.59593437431231	chr6	54179267	54180968	+	0	NA	intron (NM_001163640, intron 6 of 12)	intron (NM_001163640, intron 6 of 12)	-42699	NM_023543	69993	Mm.321147	NM_023543	ENSMUSG00000004633	Chn2	1700026N20Rik|4930557O16Rik|ARHGAP3|Bch	chimerin 2	protein-coding
unique_peak1-5882-14-3-1.89921616035764-2.80787975886178	chr6	86570869	86571596	+	0	NA	Intergenic	Intergenic	-6936	NM_026414	67855	Mm.183043	NM_026414	ENSMUSG00000033508	Asprv1	2300003P22Rik|AA986851|SASP|SASPase|Taps	aspartic peptidase, retroviral-like 1	protein-coding
common_peak1-14123-16-15-0.118263642268062-0.328191099940264	chr2	129129033	129129670	+	0	NA	intron (NM_010554, intron 5 of 6)	intron (NM_010554, intron 5 of 6)	6245	NR_040371	100503468	Mm.446943	NR_040371	ENSMUSG00000085498	Gm14023	OTTMUSG00000015408	predicted gene 14023	ncRNA
common_peak2-19931-24-22-0.269647946710704-0.457753417732779	chr1	127290272	127291080	+	0	NA	intron (NM_001205385, intron 12 of 12)	intron (NM_001205385, intron 12 of 12)	41628	NM_023735	74117	Mm.183102	NM_023735	ENSMUSG00000026341	Actr3	1200003A09Rik|Arp3	ARP3 actin-related protein 3	protein-coding
common_peak1-9846-62-89--0.0811016375275901-0.320999317136426	chr12	79028370	79029919	+	0	NA	Intergenic	RMER17C|LTR|ERVK	-298498	NM_172952	268566	Mm.341742	NM_145965	ENSMUSG00000047454	Gphn	5730552E08Rik|AI662856|BC027112|C230040D23|GPH|GPHRYN|geph	gephyrin	protein-coding
common_peak2-22756-8-18--1.24270509549601-1.15812782348128	chr13	113794635	113795211	+	0	NA	Intergenic	L1Md_F|LINE|L1	10847	NM_001037914	622408	Mm.360976	NM_001037914	ENSMUSG00000074651	Mcidas	EG622408|Gm6320|Idas|Mci|Mcin	multiciliate differentiation and DNA synthesis associated cell cycle protein	protein-coding
common_peak1-16514-12-9-0.326847890200276-0.459837087125828	chr5	140443955	140444627	+	0	NA	intron (NM_175522, intron 1 of 1)	intron (NM_175522, intron 1 of 1)	60394	NM_175522	243312	Mm.237102	NM_175522	ENSMUSG00000048988	Elfn1	A930017N06Rik|AI197272|Ppp1r28	leucine rich repeat and fibronectin type III, extracellular 1	protein-coding
unique_peak1-375-8-0-3.00522241794757-2.70926996097583	chr1	150041272	150041698	+	0	NA	Intergenic	Lx|LINE|L1	1696668	NM_001145807	215378	Mm.441817	NM_153539	ENSMUSG00000035131	Brinp3	B830045N13Rik|Fam5c	bone morphogenetic protein/retinoic acid inducible neural specific 3	protein-coding
common_peak1-11998-82-84-0.483872208168033-1.61797185397914	chr17	13554723	13556805	+	0	NA	intron (NM_001167578, intron 7 of 11)	intron (NM_001167578, intron 7 of 11)	8326	NM_001167578	100041352	Mm.490251	NM_001167578	ENSMUSG00000052469	Tcp10c	D17Leh66C|D17Leh66ca|Gm9880|T66C-a|Tcp-10c	t-complex protein 10c	protein-coding
unique_peak2-38511-6-14--1.34149248522822-1.01572999746118	chr7	44748463	44748891	+	0	NA	Intergenic	Intergenic	1771227	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak2-29329-14-27--0.908138761699959-1.05601013496724	chr5	147077411	147078040	+	0	NA	intron (NM_153599, intron 2 of 12)	B4|SINE|B4	34474	NM_153599	264064	Mm.260576	NM_153599	ENSMUSG00000029635	Cdk8	-	cyclin-dependent kinase 8	protein-coding
common_peak2-24663-14-16--0.188246680892695-0.308035960714963	chr17	35969928	35970467	+	0	NA	TTS (NM_008027)	TTS (NM_008027)	5049	NM_011655	22154	Mm.273538	NM_011655	ENSMUSG00000001525	Tubb5	AA408537|AI596182|B130022C14Rik|M(beta)5	tubulin, beta 5 class I	protein-coding
common_peak1-8145-45-57-0.00237703021729985-0.30291825633885	chr1	191223816	191225130	+	0	NA	intron (NM_001281848, intron 1 of 5)	intron (NM_001281848, intron 1 of 5)	1679	NM_001281848	16526	Mm.33304	NM_010607	ENSMUSG00000037624	Kcnk2	A430027H14Rik|AI848635|TREK-1	potassium channel, subfamily K, member 2	protein-coding
unique_peak1-6401-11-3-1.50869358425161-1.95434855131066	chr7	80296872	80297385	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-50174	NR_046024	625243	Mm.261798	NR_046024		Gm6567	-	predicted gene 6567	ncRNA
unique_peak2-36009-5-9--1.02630843089322-1.21398586181642	chr19	38607607	38608120	+	0	NA	intron (NM_019588, intron 1 of 31)	MER58B|DNA|MER1_type	9176	NM_019588	74055	Mm.34031	NM_019588	ENSMUSG00000024998	Plce1	4933403A21Rik|PLCepsilon|Plce|mKIAA1516	phospholipase C, epsilon 1	protein-coding
unique_peak2-35975-18-23--0.272043349492805-0.34651636097721	chr19	21778274	21779286	+	0	NA	Intergenic	Intergenic	50981	NM_146096	226016	Mm.28796	NM_146096	ENSMUSG00000047368	Abhd17b	5730446C15Rik|Cgi67|Fam108b|Fam108b1	abhydrolase domain containing 17B	protein-coding
common_peak2-25098-26-39--0.3940290027289-0.556669751231374	chr18	36559241	36560317	+	0	NA	Intergenic	Intergenic	51501	NM_001081365	66060	Mm.272527	NM_001081365		Cystm1	0610010O12Rik	cysteine-rich transmembrane module containing 1	protein-coding
common_peak2-30918-16-14-0.211373046659543-0.364171515310935	chr7	144752091	144752517	+	0	NA	Intergenic	MER3|DNA|MER1_type	122947	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
unique_peak2-38215-8-14--0.901668177660948-0.660903317613906	chr6	114893844	114894669	+	0	NA	Intergenic	Lx8|LINE|L1	-22486	NM_177683	232334	Mm.268357	NM_177683		Vgll4	BC048841|VGL-4	vestigial like 4 (Drosophila)	protein-coding
common_peak1-19055-12-27--1.15857893696997-1.38791538138627	chr9	66946047	66946594	+	0	NA	Intergenic	Intergenic	-35048	NR_045748	100502636	Mm.412607	NR_045748		Gm19299	-	predicted gene, 19299	ncRNA
common_peak2-30909-27-27-0.184191028837632-0.393151991482004	chr7	143614319	143615681	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-73902	NR_040459	330664	Mm.127762	NR_040459		C230079O03Rik	C230079O03	RIKEN cDNA C230079O03 gene	ncRNA
common_peak2-23757-7-6--0.00826409175941478-0.97990265578305	chr15	97840493	97840793	+	0	NA	Intergenic	Intergenic	-5488	NM_001113515	12824	Mm.2423	NM_031163	ENSMUSG00000022483	Col2a1	Col2|Col2a|Col2a-1|Del1|Dmm|Lpk|M100856|Rgsc856	collagen, type II, alpha 1	protein-coding
common_peak1-12646-83-86-0.471279129257399-1.59227420376343	chr18	35562179	35563758	+	0	NA	intron (NM_030749, intron 3 of 9)	intron (NM_030749, intron 3 of 9)	95611	NM_030749	81500	Mm.291482	NM_030749	ENSMUSG00000024357	Sil1	1810057E01Rik|AI042831|wz	endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)	protein-coding
unique_peak1-5339-9-2-1.60465090568306-1.87199725847353	chr5	90758955	90759477	+	0	NA	intron (NM_030886, intron 2 of 34)	intron (NM_030886, intron 2 of 34)	35995	NM_030886	81702	Mm.245522	NM_030886	ENSMUSG00000055204	Ankrd17	4933425K22Rik|A130069E23Rik|A930008M01|AA407558|AA516750|AU040470|Foe|Gtar|Mask|mKIAA0697	ankyrin repeat domain 17	protein-coding
common_peak2-30231-18-20--0.0793982715504091-0.301029995663976	chr7	4501030	4501844	+	0	NA	intron (NM_207270, intron 18 of 19)	B1_Mus1|SINE|Alu	-3268	NM_016908	53420	Mm.358663	NM_016908	ENSMUSG00000004961	Syt5	SytV	synaptotagmin V	protein-coding
common_peak2-27800-71-184--0.886937281796341-5.77761962463066	chr3	142394041	142396321	+	0	NA	intron (NM_173763, intron 10 of 13)	intron (NM_173763, intron 10 of 13)	31169	NM_001293560	229905	Mm.289643	NM_173763	ENSMUSG00000040213	Ccbl2	KATIII|Kat3	cysteine conjugate-beta lyase 2	protein-coding
common_peak1-14711-38-22-1.04789070324152-2.44914526326141	chr3	75939993	75941451	+	0	NA	intron (NM_001253719, intron 1 of 15)	intron (NM_001253719, intron 1 of 15)	61217	NM_001253719	213262	Mm.379337	NM_178673	ENSMUSG00000034098	Fstl5	9130207J01Rik	follistatin-like 5	protein-coding
common_peak2-21967-9-10--0.269818212233077-1.05503135781948	chr12	41949989	41950464	+	0	NA	intron (NM_053122, intron 4 of 6)	intron (NM_053122, intron 4 of 6)	199549	NM_053122	93757	Mm.363813	NM_053122	ENSMUSG00000056899	Immp2l	AI853880|IMP2	IMP2 inner mitochondrial membrane peptidase-like (S. cerevisiae)	protein-coding
common_peak1-9650-44-113--1.01099717959621-4.38254351119263	chr12	86883032	86884834	+	0	NA	Intergenic	MTD|LTR|MaLR	-56122	NM_001205052	81703	Mm.103560	NM_030887	ENSMUSG00000034271	Jdp2	Jundm2|Jundp2|TIF	Jun dimerization protein 2	protein-coding
unique_peak1-950-11-3-1.50869358425161-1.95434855131066	chr11	57913048	57913617	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	-4323	NM_026949	69125	Mm.28910	NM_026949	ENSMUSG00000020515	Cnot8	1500015I04Rik|1810022F04Rik|AA536816|AU015770|AU043059	CCR4-NOT transcription complex, subunit 8	protein-coding
unique_peak2-38492-2-10--2.37688587490062-2.09384600808989	chr7	35330330	35330948	+	0	NA	Intergenic	Intergenic	107221	NM_146188	233107	Mm.486198	NM_146188	ENSMUSG00000030499	Kctd15	BC031749	potassium channel tetramerisation domain containing 15	protein-coding
common_peak2-21185-7-6--0.00826409175941478-0.97990265578305	chr11	60140108	60140554	+	0	NA	intron (NM_153080, intron 1 of 14)	intron (NM_153080, intron 1 of 14)	26076	NM_153080	216810	Mm.218875	NM_153080	ENSMUSG00000000538	Tom1l2	2900016I08Rik|A730055F12Rik|AU042072|Srebf1	target of myb1-like 2 (chicken)	protein-coding
common_peak1-13349-28-14-1.14606852421294-2.01759298435799	chr19	44377670	44378702	+	0	NA	TTS (NR_039574)	TTS (NR_039574)	525	NR_039574	100628619		NR_039574		Mir5114	mmu-mir-5114|mu-mir-5114	microRNA 5114	ncRNA
unique_peak1-6625-18-8-1.14299414978604-1.45476480588849	chr8	8602280	8603033	+	0	NA	Intergenic	Intergenic	58117	NM_010111	13642	Mm.209813	NM_010111	ENSMUSG00000001300	Efnb2	ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1	ephrin B2	protein-coding
unique_peak1-4601-10-2-1.77145284428761-2.09384600808989	chr3	62568783	62569313	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-159986	NM_177346	229357	Mm.95181	NM_177346		Gpr149	9630018L10Rik|Ieda|PGR10|R35	G protein-coupled receptor 149	protein-coding
common_peak2-32212-7-6--0.00826409175941478-0.97990265578305	chr9	121396138	121396427	+	0	NA	Intergenic	Intergenic	8530	NM_001284508	12424	Mm.2619	NM_031161	ENSMUSG00000032532	Cck	-	cholecystokinin	protein-coding
common_peak1-10929-24-24-0.149353712992992-0.367910579842133	chr15	9140367	9141504	+	0	NA	Intergenic	L1_Mm|LINE|L1	-55754	NM_001285980	27401	Mm.35584	NM_013787	ENSMUSG00000054115	Skp2	FBXL1|FWD1|p45	S-phase kinase-associated protein 2 (p45)	protein-coding
common_peak1-8506-16-13-0.310908720210457-0.417187467413082	chr10	82622519	82623191	+	0	NA	intron (NM_021439, intron 2 of 2)	MIRm|SINE|MIR	174613	NM_021439	58250	Mm.360747	NM_021439	ENSMUSG00000034612	Chst11	1110020P09Rik|C4ST|C4ST-1|C4ST1|C4s	carbohydrate sulfotransferase 11	protein-coding
common_peak2-22711-14-30--1.05498015002923-1.40782320807776	chr13	101768248	101769070	+	0	NA	Intergenic	MLT1D|LTR|MaLR	-165277	NM_022885	69048	Mm.402215	NM_022885	ENSMUSG00000021629	Slc30a5	1810010K08Rik|AF233321|ZNT5|ZTL1|ZnT-5|Zntl1	solute carrier family 30 (zinc transporter), member 5	protein-coding
unique_peak2-36803-8-11--0.579740082773585-1.14218153353838	chr3	84021390	84021966	+	0	NA	intron (NM_001271726, intron 1 of 11)	intron (NM_001271726, intron 1 of 11)	3121	NM_030706	80890	Mm.44876	NM_030706	ENSMUSG00000027993	Trim2	mKIAA0517|narf	tripartite motif-containing 2	protein-coding
common_peak2-19820-18-9-0.990991056340989-1.23014042908325	chr1	88575732	88576250	+	0	NA	Intergenic	YREP_Mm|Unknown|Unknown	-8843	NM_010933	18159	Mm.12802	NM_010933	ENSMUSG00000026241	Nppc	CNP|lbab	natriuretic peptide type C	protein-coding
unique_peak2-33273-13-27--1.02888289141984-1.21173582416604	chr10	128803900	128805111	+	0	NA	Intergenic	MMETn-int|LTR|ERVK	16884	NM_001011797	257985	Mm.422962	NM_001011797	ENSMUSG00000095075	Olfr782	MOR110-8	olfactory receptor 782	protein-coding
common_peak2-22631-10-11--0.228547155712387-0.31137425193576	chr13	88821375	88821966	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-139407	NM_010103	13612	Mm.125580	NM_010103	ENSMUSG00000034488	Edil3	Del-1|Del1	EGF-like repeats and discoidin I-like domains 3	protein-coding
common_peak2-31638-75-116--0.13129772784012-0.379925531631896	chr8	123717563	123718654	+	0	NA	Intergenic	Intergenic	66523	NM_008024	14241	Mm.5111	NM_008024	ENSMUSG00000097084	Foxl1	FREAC7|Fkh6|fkh-6	forkhead box L1	protein-coding
unique_peak2-38624-8-15--0.994777582052429-0.771068449301683	chr7	80823092	80823791	+	0	NA	Intergenic	MT2_Mm|LTR|ERVL	8008	NR_033604	244061	Mm.484605	NR_033604		Gm4971	EG244061	Smad nuclear interacting protein 1 pseudogene	pseudo
common_peak2-28752-36-36-0.269867720538804-0.51862626278861	chr5	41707546	41708636	+	0	NA	Intergenic	MTEa|LTR|MaLR	391303	NM_027295	100972	Mm.41555	NM_027295	ENSMUSG00000029128	Rab28	2700023P08Rik|AW496496	RAB28, member RAS oncogene family	protein-coding
unique_peak1-4721-10-4-1.03448725012141-1.5150158574804	chr3	104523255	104523814	+	0	NA	Intergenic	B3|SINE|B2	56931	NM_183224	329731	Mm.389494	NM_183224	ENSMUSG00000055865	Fam19a3	7530404M11Rik|TAFA3|Tafa-3	family with sequence similarity 19, member A3	protein-coding
unique_peak2-33280-4-7--1.02346051385325-1.09384600808989	chr11	6389385	6389805	+	0	NA	Intergenic	Intergenic	-13516	NM_011221	19291	Mm.390332	NM_011221	ENSMUSG00000094483	Purb	2310015K15Rik|AA114818|Cager-2|D11Bwg0414e	purine rich element binding protein B	protein-coding
common_peak2-27285-7-6--0.00826409175941478-0.97990265578305	chr3	58203111	58203408	+	0	NA	Intergenic	Intergenic	-16352	NM_001081229	72033	Mm.218409	NM_028067	ENSMUSG00000027806	Tsc22d2	1810043J12Rik|5530402M19Rik	TSC22 domain family, member 2	protein-coding
unique_peak1-1536-10-1-2.35641534500877-2.57096726280955	chr13	17290595	17290954	+	0	NA	intron (NM_138654, intron 12 of 13)	intron (NM_138654, intron 12 of 13)	495825	NM_138654	192136	Mm.364180	NM_138654		Sugct	5033411D12Rik|D17907	succinyl-CoA glutarate-CoA transferase	protein-coding
common_peak2-30570-22-17-0.477359103645092-0.633951497070961	chr7	79781208	79781894	+	0	NA	Intergenic	Intergenic	-330070	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding
common_peak1-13258-53-71--0.0289519890263836-0.301029995663963	chr19	32755646	32757241	+	0	NA	intron (NM_026487, intron 8 of 9)	intron (NM_026487, intron 8 of 9)	30345	NM_026487	67979	Mm.27123	NM_026487	ENSMUSG00000013662	Atad1	4921525H23Rik|AW107648|Thorase	ATPase family, AAA domain containing 1	protein-coding
common_peak2-28513-8-20--1.38709500483119-1.45476480588849	chr5	76529314	76529921	+	0	NA	Intergenic	Intergenic	-39681	NM_020611	57357	Mm.289446	NM_020611	ENSMUSG00000029233	Srd5a3	1110025P14Rik|A430076C09|AV364670|AW987574|D730040M03Rik|H5ar|S5AR 3|Srd5a2l	steroid 5 alpha-reductase 3	protein-coding
common_peak1-10959-41-10-2.24171708621136-7.06877884694863	chr15	27421810	27423297	+	0	NA	intron (NM_020332, intron 1 of 11)	RMER30|DNA|MER1_type	26121	NM_020332	11732	Mm.265264	NM_020332	ENSMUSG00000022265	Ank	Ankh|D15Ertd221e|ank|mKIAA1581	progressive ankylosis	protein-coding
unique_peak2-38784-3-5--0.998945590680433-0.96108193396963	chr7	128310860	128311203	+	0	NA	Intergenic	Intergenic	84079	NM_139310	246190	Mm.221073	NM_139310	ENSMUSG00000034990	Otoa	-	otoancorin	protein-coding
unique_peak1-1555-8-3-1.00522241794757-1.39487600375387	chr13	25809073	25809586	+	0	NA	Intergenic	(GGGAA)n|Simple_repeat|Simple_repeat	248856	NR_045062	100503530	Mm.86763	NR_045062	ENSMUSG00000086531	Gm11351	OTTMUSG00000000620	predicted gene 11351	ncRNA
common_peak2-27238-11-13--0.298661337805991-0.337263207250336	chr3	52087618	52088300	+	0	NA	intron (NM_019739, intron 1 of 2)	B2_Mm1t|SINE|B2	15700	NM_019739	56458	Mm.29891	NM_019739	ENSMUSG00000044167	Foxo1	AI876417|Afxh|FKHR|Fkhr1|Foxo1a	forkhead box O1	protein-coding
common_peak1-11115-84-67-0.847471217638686-3.82732931068788	chr15	62327343	62329867	+	0	NA	Intergenic	Intergenic	-277599	NR_003523	67552	Mm.484027	NM_026230		H2afy3	4933432H23Rik	H2A histone family, member Y3	pseudo
common_peak2-32046-94-145--0.0602349910307014-0.320078976497804	chr9	80066497	80068191	+	0	NA	intron (NM_001039546, intron 2 of 32)	intron (NM_001039546, intron 2 of 32)	54503	NM_001039546	17920	Mm.4040	NM_008662	ENSMUSG00000033577	Myo6	BC029719|Tlc|sv	myosin VI	protein-coding
common_peak2-24250-37-34-0.396710054540852-0.69337412621609	chr16	91969891	91971203	+	0	NA	Intergenic	Intergenic	-38672	NM_138597	28080	Mm.41	NM_138597	ENSMUSG00000022956	Atp5o	ATPO|D12Wsu28e|OSCP	ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit	protein-coding
common_peak2-23647-29-37--0.135637432828474-0.313095283157754	chr15	84279630	84280863	+	0	NA	Intergenic	Intergenic	-2719	NM_001163145	72301	Mm.275387	NM_001163145	ENSMUSG00000062760	1810041L15Rik	Kiaa1644	RIKEN cDNA 1810041L15 gene	protein-coding
common_peak1-16568-26-13-1.12054417010086-1.80107744087171	chr5	146679277	146680511	+	0	NA	intron (NM_007818, intron 7 of 12)	B1F2|SINE|Alu	11536	NM_007818	13112	Mm.332844	NM_007818	ENSMUSG00000056035	Cyp3a11	AI256190|Cyp3a|IIIAm1|Pcn	cytochrome P450, family 3, subfamily a, polypeptide 11	protein-coding
common_peak1-14363-10-2-1.77145284428761-2.09384600808989	chr2	167403441	167404048	+	0	NA	Intergenic	Intergenic	40017	NM_011427	20613	Mm.2093	NM_011427	ENSMUSG00000042821	Snai1	AI194338|Sna|Sna1|Snail|Snail1	snail family zinc finger 1	protein-coding
common_peak2-22110-100-146-0.0370994299744254-0.319309246450705	chr12	80945033	80946553	+	0	NA	Intergenic	Intergenic	268207	NM_007564	12192	Mm.235132	NM_007564	ENSMUSG00000021127	Zfp36l1	AW742437|AW743212|Berg36|Brf1|D530020L18Rik|ERF1|TIS11b|cMG1	zinc finger protein 36, C3H type-like 1	protein-coding
unique_peak1-2592-11-1-2.50869358425161-2.83420869758413	chr16	31605903	31606506	+	0	NA	Intergenic	Intergenic	-57325	NM_001252435	13383	Mm.382	NM_007862	ENSMUSG00000022770	Dlg1	B130052P05Rik|Dlgh1|E-dlg/SAP97|SAP-97|SAP97|mKIAA4187	discs, large homolog 1 (Drosophila)	protein-coding
common_peak2-22320-13-9-0.456543935750406-0.53895475198017	chr13	21945205	21945660	+	0	NA	Intergenic	MT2B|LTR|ERVL	19820	NM_001110555	665622	Mm.471247	NM_001110555		Hist1h2br	Gm11277|OTTMUSG00000000449	histone cluster 1 H2br	protein-coding
common_peak1-11424-34-22-0.858506570944253-1.68120055799038	chr15	99591764	99593400	+	0	NA	intron (NM_028015, intron 1 of 9)	ID_B1|SINE|B4	10364	NM_028015	71949	Mm.390821	NM_028015		Cers5	2310081H14Rik|AU045339|AW544927|Lass5|Trh4	ceramide synthase 5	protein-coding
common_peak2-20763-6-5--0.0195643903408542-0.947717972411649	chr10	116261001	116261451	+	0	NA	intron (NM_001033333, intron 10 of 24)	intron (NM_001033333, intron 10 of 24)	72709	NM_001033333	237558	Mm.336386	NM_001033333	ENSMUSG00000034057	Myrfl	Gm239	myelin regulatory factor-like	protein-coding
unique_peak2-34431-3-7--1.41398308995928-1.23214870625617	chr14	20836219	20836648	+	0	NA	Intergenic	Lx7|LINE|L1	-39962	NM_001285909	14702	Mm.41737	NM_010315	ENSMUSG00000043004	Gng2	82	guanine nucleotide binding protein (G protein), gamma 2	protein-coding
common_peak1-10976-62-63-0.410751458802085-1.01379877677007	chr15	31184493	31186225	+	0	NA	intron (NM_146057, intron 2 of 3)	intron (NM_146057, intron 2 of 3)	31219	NM_146057	223453	Mm.222867	NM_146057	ENSMUSG00000039168	Dap	4921531N22Rik|AI789753|AU040360	death-associated protein	protein-coding
unique_peak2-39770-11-14--0.398197011356905-0.379391706698377	chrX	7428446	7428981	+	0	NA	intron (NM_001290536, intron 1 of 8)	B1_Mus2|SINE|Alu	9505	NM_001290537	54644	Mm.142827	NM_138604	ENSMUSG00000031154	Otud5	AA407879|AI553596|BB114028|DUBA|DXImx46e|Sfc7	OTU domain containing 5	protein-coding
unique_peak1-7004-15-5-1.4272022498345-1.61682445937017	chr8	122586356	122586984	+	0	NA	Intergenic	Intergenic	38702	NM_133967	102193	Mm.240076	NM_133967	ENSMUSG00000031823	Zdhhc7	AL024087|Gramp2	zinc finger, DHHC domain containing 7	protein-coding
unique_peak1-5692-8-1-2.00522241794757-2.05605744720049	chr6	34371921	34372418	+	0	NA	intron (NM_009731, intron 9 of 9)	intron (NM_009731, intron 9 of 9)	9807	NM_009731	11997	Mm.482073	NM_009731	ENSMUSG00000052131	Akr1b7	AR|Avdp|MVDP	aldo-keto reductase family 1, member B7	protein-coding
unique_peak1-3582-8-4-0.683294323060208-1.21878474469819	chr19	29471760	29472299	+	0	NA	Intergenic	Intergenic	-13380	NM_021396	58205	Mm.116737	NM_021396		Pdcd1lg2	B7-DC|Btdc|F730015O22Rik|PD-L2	programmed cell death 1 ligand 2	protein-coding
common_peak2-19552-17-39--1.10363175668232-1.82978420966174	chr1	183680275	183681398	+	0	NA	Intergenic	B2_Mm1a|SINE|B2	91696	NM_133815	98386	Mm.4538	NM_133815	ENSMUSG00000004880	Lbr	AI505894|ic	lamin B receptor	protein-coding
common_peak2-23008-95-187--0.406673506653624-1.6417734682916	chr14	61680943	61683757	+	0	NA	Intergenic	Intergenic	-16658	NM_013869	29820	Mm.281356	NM_013869	ENSMUSG00000060548	Tnfrsf19	AL023044|AW123854|TAJ|TAJ-ALPHA|TRADE|Troy	tumor necrosis factor receptor superfamily, member 19	protein-coding
unique_peak1-2821-28-7-2.05295911982146-4.28647646517482	chr17	26591667	26592975	+	0	NA	Intergenic	RMER17A2|LTR|ERVK	40411	NM_001081656	240055	Mm.133211	NM_001081656	ENSMUSG00000034413	Neurl1b	C230078M08Rik|EG240055	neuralized homolog 1b (Drosophila)	protein-coding
common_peak2-25479-22-20-0.254966682308644-0.421916810733237	chr19	4811768	4812167	+	0	NA	promoter-TSS (NM_019869)	promoter-TSS (NM_019869)	-333	NM_019869	56275	Mm.276338	NM_019869	ENSMUSG00000006456	Rbm14	1300007E16Rik|PSP2|Sytip|p16|p16K	RNA binding motif protein 14	protein-coding
unique_peak1-4071-18-2-2.7279566505072-4.01305082679061	chr2	65215215	65216030	+	0	NA	Intergenic	RLTR17|LTR|ERVK	-13165	NR_105755	102466151		NR_105755	miRBase:MI0021865	Mir6337	mmu-mir-6337	microRNA mir-6337	ncRNA
unique_peak2-39083-10-12--0.344024373132323-0.340565874754526	chr8	75018430	75019140	+	0	NA	3' UTR (NM_027485, exon 3 of 3)	3' UTR (NM_027485, exon 3 of 3)	-2272	NM_177766	270066	Mm.291461	NM_177766	ENSMUSG00000019731	Slc35e1	6030458H05|AA408278	solute carrier family 35, member E1	protein-coding
unique_peak1-1662-11-3-1.50869358425161-1.95434855131066	chr13	63242268	63242887	+	0	NA	intron (NM_001289926, intron 5 of 15)	intron (NM_001289926, intron 5 of 15)	-98761	NR_110520	72061	Mm.188105	NM_028079	ENSMUSG00000021458	2010111I01Rik	2300006M17Rik|AP-O|Aopep	RIKEN cDNA 2010111I01 gene	protein-coding
unique_peak2-33076-6-9--0.75652998450706-1.11707584880836	chr10	79926831	79927293	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-30589	NM_139226	246086	Mm.250572	NM_139226	ENSMUSG00000045518	Onecut3	OC-3|Oc3	one cut domain, family member 3	protein-coding
common_peak1-15886-16-72--2.07156091661196-8.24256042484306	chr5	9100779	9101522	+	0	NA	intron (NM_001081029, intron 1 of 4)	CpG	413	NM_001081029	652925	Mm.439954	NM_001081029	ENSMUSG00000079659	Tmem243	4930420K17Rik|E030031F02Rik	transmembrane protein 243, mitochondrial	protein-coding
unique_peak1-5716-13-6-0.971117108580164-1.01572999746118	chr6	41521228	41521862	+	0	NA	Intergenic	Intergenic	-33936	NM_001146351	13848	Mm.271976	NM_007680	ENSMUSG00000029869	Ephb6	Cekl|Mep	Eph receptor B6	protein-coding
common_peak1-10165-27-30-0.0373496405083609-0.315041925765932	chr13	37993430	37994207	+	0	NA	intron (NR_033615, intron 6 of 9)	B3A|SINE|B2	13078	NM_001177869	68750	Mm.491109	NM_026830	ENSMUSG00000039087	Rreb1	1110037N09Rik|AA414966|B930013M22Rik	ras responsive element binding protein 1	protein-coding
unique_peak2-36420-5-6--0.511735258063458-0.947717972411649	chr2	128241466	128241868	+	0	NA	intron (NR_028591, intron 1 of 1)	intron (NR_028591, intron 1 of 1)	13420	NR_028591	100043424	Mm.297222	NR_028589		Gm14005	OTTMUSG00000015351	predicted gene 14005	ncRNA
unique_peak2-32986-2-6--1.72480917832092-1.26211192963361	chr10	59725117	59725434	+	0	NA	Intergenic	Intergenic	-15101	NM_001146123	19156	Mm.277498	NM_011179	ENSMUSG00000004207	Psap	AI037048|SGP-1	prosaposin	protein-coding
unique_peak1-2550-29-18-0.864362567171526-1.50628532113231	chr16	23519685	23521110	+	0	NA	intron (NM_008555, intron 1 of 15)	intron (NM_008555, intron 1 of 15)	266	NM_008555	17174	Mm.1213	NM_008555	ENSMUSG00000022887	Masp1	AW048060|CCPII|Crarf|Masp1/3	mannan-binding lectin serine peptidase 1	protein-coding
common_peak2-24336-59-92--0.213794810235453-0.482975456916967	chr17	4767895	4769543	+	0	NA	Intergenic	Intergenic	-226355	NM_001085355	239985	Mm.133401	NM_001085355	ENSMUSG00000069729	Arid1b	8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235	AT rich interactive domain 1B (SWI-like)	protein-coding
common_peak2-20729-8-6-0.197867495889966-1.03789460276074	chr10	99210957	99211387	+	0	NA	Intergenic	Intergenic	11120	NM_027945	71832	Mm.483162	NM_027945	ENSMUSG00000046934	Csl	1700007H16Rik	citrate synthase like	protein-coding
unique_peak1-1312-19-6-1.59533240460408-2.21753093801298	chr11	120768043	120768982	+	0	NA	intron (NM_027745, intron 3 of 18)	intron (NM_027745, intron 3 of 18)	25674	NM_027745	71276	Mm.275751	NM_027745	ENSMUSG00000048445	Ccdc57	4933434G05Rik	coiled-coil domain containing 57	protein-coding
common_peak1-10902-52-47-0.523297489544543-1.21256932621262	chr15	103365562	103367270	+	0	NA	intron (NM_021391, intron 1 of 6)	intron (NM_021391, intron 1 of 6)	2007	NM_021391	58200	Mm.143788	NM_021391	ENSMUSG00000022490	Ppp1r1a	0610038N18Rik|I-1	protein phosphatase 1, regulatory (inhibitor) subunit 1A	protein-coding
common_peak1-12802-21-17-0.399564263823923-0.561823156887258	chr18	65520563	65521512	+	0	NA	intron (NM_001037294, intron 3 of 12)	intron (NM_001037294, intron 3 of 12)	32505	NM_001037294	225638	Mm.296528	NM_001037294	ENSMUSG00000032845	Alpk2	Gm549|Hak	alpha-kinase 2	protein-coding
unique_peak1-4320-9-4-0.867685311516858-1.36011389749466	chr2	150878820	150879452	+	0	NA	Intergenic	MTC|LTR|MaLR	-14021	NM_026086	67311	Mm.480682	NM_026086	ENSMUSG00000053916	Nanp	1600031M04Rik|Hdhd4	N-acetylneuraminic acid phosphatase	protein-coding
common_peak1-17419-76-143--0.407980615579031-1.30019425906985	chr7	7298164	7300357	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-9056	NM_009490	22306	Mm.458977	NM_009490	ENSMUSG00000070847	Vmn2r30	ENSMUSG00000070847|V2r15	vomeronasal 2, receptor 30	protein-coding
common_peak1-19040-18-12-0.612479433087259-0.739965416525508	chr9	65201432	65202434	+	0	NA	intron (NM_016688, intron 1 of 4)	RLTR12B|LTR|ERVK	-6934	NM_001111145	208080	Mm.291862	NM_001111145	ENSMUSG00000086228	Ubap1l	Gm514	ubiquitin-associated protein 1-like	protein-coding
common_peak2-24978-23-46--0.832821347168557-1.52341724501299	chr18	6764861	6765632	+	0	NA	promoter-TSS (NM_001278447)	promoter-TSS (NM_001278447)	81	NM_001278447	19330	Mm.132802	NM_181070		Rab18	AA959686	RAB18, member RAS oncogene family	protein-coding
unique_peak2-35849-4-7--1.02346051385325-1.09384600808989	chr18	74779400	74779922	+	0	NA	intron (NM_201600, intron 5 of 38)	L1MB4|LINE|L1	-88883	NR_045368	73606	Mm.444734	NR_045368		1700120E14Rik	-	RIKEN cDNA 1700120E14 gene	ncRNA
common_peak2-30658-29-45--0.411271875441902-0.573175361577109	chr7	100582484	100583424	+	0	NA	Intergenic	Intergenic	354565	NM_021427	58238	Mm.113787	NM_021427		Fam181b	A830059I20Rik|AB041569	family with sequence similarity 181, member B	protein-coding
unique_peak2-35007-2-5--1.50241675698448-1.08602067057793	chr15	100416666	100417108	+	0	NA	promoter-TSS (NM_010127)	promoter-TSS (NM_010127)	-91	NM_010127	19009	Mm.28825	NM_010127	ENSMUSG00000009739	Pou6f1	2310038G18Rik|Brn5.0|C79593|Emb|cns-1	POU domain, class 6, transcription factor 1	protein-coding
common_peak2-21331-37-51--0.174446646655273-0.357020589591567	chr11	75653111	75654179	+	0	NA	intron (NM_029548, intron 5 of 7)	intron (NM_029548, intron 5 of 7)	-44086	NM_007873	13447	Mm.5137	NM_007873	ENSMUSG00000020848	Doc2b	-	double C2, beta	protein-coding
common_peak1-8250-13-11-0.193509529916613-0.379391706698377	chr10	19191950	19192660	+	0	NA	Intergenic	Intergenic	115960	NM_053008	94222	Mm.156946	NM_053008	ENSMUSG00000045591	Olig3	Bhlhb7|bHLHe20	oligodendrocyte transcription factor 3	protein-coding
common_peak2-29766-9-8-0.0196884049619079-1.03275496310833	chr6	87277691	87278100	+	0	NA	intron (NM_054041, intron 1 of 17)	intron (NM_054041, intron 1 of 17)	7874	NM_054041	69538	Mm.232525	NM_054041	ENSMUSG00000033420	Antxr1	2310008J16Rik|2810405N18Rik|Antrx1|Tem8	anthrax toxin receptor 1	protein-coding
common_peak1-11973-11-9-0.186765489364251-0.344532117358383	chr17	6947795	6948346	+	0	NA	intron (NM_009510, intron 7 of 12)	intron (NM_009510, intron 7 of 12)	37891	NM_183368	83672	Mm.442201	NM_031395	ENSMUSG00000041831	Sytl3	A430092N21|Slp3|Slp3-a|Slp3-b|mFLJ00307	synaptotagmin-like 3	protein-coding
common_peak2-22219-12-18--0.599151528355947-0.476916024233333	chr12	112797101	112797732	+	0	NA	Intergenic	Intergenic	15197	NR_045295	100504687	Mm.26072	NR_045295	ENSMUSG00000096995	2810029C07Rik	AU017849	RIKEN cDNA 2810029C07 gene	ncRNA
unique_peak2-32704-9-14--0.717277189204299-0.53895475198017	chr1	152624595	152625223	+	0	NA	intron (NM_001024720, intron 11 of 106)	intron (NM_001024720, intron 11 of 106)	215656	NM_001024720	545370	Mm.379425	NM_001024720	ENSMUSG00000066842	Hmcn1	EG545370|Gm201	hemicentin 1	protein-coding
unique_peak1-6709-11-4-1.18676548936425-1.68134727924692	chr8	35375842	35376385	+	0	NA	Intergenic	Intergenic	-146347	NR_105820	102465211		NR_105820	miRBase:MI0021930	Mir6395	mmu-mir-6395	microRNA mir-6395	ncRNA
unique_peak1-5434-24-1-3.79320990276772-7.14178280843185	chr5	114970368	114971372	+	0	NA	Intergenic	RLTR24|LTR|ERV1	-47390	NM_001004180	433940	Mm.194212	NM_001004180	ENSMUSG00000041930	Fam222a	-	family with sequence similarity 222, member A	protein-coding
common_peak2-21687-87-82-0.620597674434245-2.50688920136893	chr11	104549401	104550805	+	0	NA	Intergenic	Lx8|LINE|L1	80789	NM_016780	16416	Mm.87150	NM_016780	ENSMUSG00000020689	Itgb3	CD61|GP3A|INGRB3	integrin beta 3	protein-coding
common_peak1-9843-38-38-0.286050440436282-0.554098881286537	chr12	78748954	78749924	+	0	NA	Intergenic	Lx4A|LINE|L1	238311	NM_001252616	53618	Mm.35628	NM_016893	ENSMUSG00000021065	Fut8	-	fucosyltransferase 8	protein-coding
common_peak1-16805-52-112--0.711918972149489-2.54064295945308	chr6	47743860	47745277	+	0	NA	Intergenic	Lx6|LINE|L1	9083	NR_030485	735289		NR_030485		Mir704	Mirn704|mmu-mir-704	microRNA 704	ncRNA
common_peak2-30889-23-33--0.365695336741259-0.481798116163913	chr7	141476251	141477178	+	0	NA	intron (NM_001081331, intron 5 of 7)	L1MA9|LINE|L1	-59934	NM_007400	11489	Mm.439714	NM_007400	ENSMUSG00000054555	Adam12	Mltna|mKIAA4001	a disintegrin and metallopeptidase domain 12 (meltrin alpha)	protein-coding
common_peak1-17894-24-39--0.528718192119646-0.694972475810969	chr7	119793620	119794810	+	0	NA	Intergenic	L1MB7|LINE|L1	-28619	NM_001166584	21676	Mm.24685	NM_009346	ENSMUSG00000055320	Tead1	2610024B07Rik|B230114H05Rik|Gtrgeo5|TEAD-1|TEF-1|Tcf13|mTEF-1	TEA domain family member 1	protein-coding
unique_peak2-34298-5-6--0.511735258063458-0.947717972411649	chr13	76930723	76931151	+	0	NA	intron (NM_030174, intron 8 of 20)	L1Md_F|LINE|L1	343792	NM_134071	105377	Mm.209730	NM_134071	ENSMUSG00000021597	Ankrd32	2700017A04Rik|AW545819|Brctd1|Brctx|C730024G01Rik	ankyrin repeat domain 32	protein-coding
unique_peak1-1008-11-5-0.923731083530457-1.477227296591	chr11	73136981	73137685	+	0	NA	intron (NM_023113, intron 1 of 5)	intron (NM_023113, intron 1 of 5)	806	NM_023113	11484	Mm.293574	NM_023113	ENSMUSG00000020774	Aspa	Acy-2|Acy2|nur7	aspartoacylase	protein-coding
common_peak1-18520-36-14-1.57243049055924-4.02188667233815	chr8	90954976	90956018	+	0	NA	Intergenic	Intergenic	-69407	NM_012047	26992	Mm.5400	NM_012047		Brd7	BP75|CELTIX1|Ptpn13ip	bromodomain containing 7	protein-coding
unique_peak2-38535-8-13--0.802132504110034-0.562038191119711	chr7	46845805	46846391	+	0	NA	Intergenic	Intergenic	72962	NM_001004139	70227	Mm.333800	NM_001004139	ENSMUSG00000068959	Zfp619	3000002G13Rik	zinc finger protein 619	protein-coding
common_peak2-26743-13-17--0.391452970804544-0.364171515310935	chr2	132263163	132263798	+	0	NA	intron (NR_045802, intron 1 of 3)	intron (NR_045802, intron 1 of 3)	13003	NR_045802	70845	Mm.158461	NR_045802	ENSMUSG00000027345	4921508D12Rik	-	RIKEN cDNA 4921508D12 gene	ncRNA
common_peak1-9566-68-32-1.52556665993984-7.39730869226063	chr11	117940710	117942412	+	0	NA	intron (NM_001167746, intron 42 of 80)	intron (NM_001167746, intron 42 of 80)	48972	NM_001167746	69926	Mm.473893	NM_001167746	ENSMUSG00000033987	Dnah17	2810003K23Rik|Dnahc17|Dnahcl1|Gm1178|mKIAA3028	dynein, axonemal, heavy chain 17	protein-coding
common_peak1-17097-53-82--0.234066418930996-0.472909071679608	chr6	113045518	113047205	+	0	NA	intron (NM_028385, intron 1 of 21)	B4A|SINE|B4	18728	NM_028385	72895	Mm.367159	NM_028385	ENSMUSG00000034269	Setd5	2900045N06Rik|C330007C20|C85544|mKIAA1757	SET domain containing 5	protein-coding
unique_peak2-39583-3-6--1.22133801201688-1.08602067057793	chr9	75770489	75770824	+	0	NA	Intergenic	L1Md_T|LINE|L1	-92128	NM_173731	208982	Mm.82306	NM_173731	ENSMUSG00000007908	Hmgcll1	BC037381	3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1	protein-coding
common_peak1-17918-47-39-0.612913329879185-1.36066917175235	chr7	126502620	126504308	+	0	NA	Intergenic	Intergenic	99322	NM_025989	67133	Mm.46403	NM_025989	ENSMUSG00000030954	Gp2	2310037I18Rik|AV060639	glycoprotein 2 (zymogen granule membrane)	protein-coding
unique_peak2-37839-1-7--2.62705701021674-1.80617997398389	chr5	134939567	134940102	+	0	NA	Intergenic	PB1D10|SINE|Alu	-7248	NM_001081464	57080	Mm.332735	NM_020331	ENSMUSG00000023079	Gtf2ird1	1700012P16Rik|BEN|Cream1|ESTM9|GTF3|Gtf2il|MusTRD1|Tg(Alb1-Myc)166.8Sst|WBSCR11|X83320	general transcription factor II I repeat domain-containing 1	protein-coding
common_peak1-14169-32-8-2.10916701777735-5.13708003886138	chr2	140758728	140759721	+	0	NA	intron (NM_001013802, intron 4 of 18)	L2|LINE|L2	-262012	NM_178382	71436	Mm.426781	NM_178382	ENSMUSG00000051379	Flrt3	5530600M07Rik|C430047I10Rik|mKIAA1469	fibronectin leucine rich transmembrane protein 3	protein-coding
common_peak2-21963-11-17--0.661231417190699-0.58239619684445	chr12	40223403	40224121	+	0	NA	Intergenic	Lx4B|LINE|L1	540201	NM_007487	11861	Mm.12723	NM_007487	ENSMUSG00000047446	Arl4a	AI467555|Arl4	ADP-ribosylation factor-like 4A	protein-coding
common_peak1-15919-46-38-0.612593724386553-1.38266584732704	chr5	24164521	24165750	+	0	NA	Intergenic	Intergenic	13864	NR_003953	72252	Mm.87446	NR_003953	ENSMUSG00000038165	1700022A21Rik	-	glycerol-3-phosphate dehydrogenase 1-like pseudogene	pseudo
common_peak2-29134-15-30--0.942031559831219-1.24110690293937	chr5	124540770	124541496	+	0	NA	intron (NM_019875, intron 1 of 11)	B3|SINE|B2	4674	NM_019875	56325	Mm.254839	NM_019875	ENSMUSG00000029408	Abcb9	TAPL|mKIAA1520	ATP-binding cassette, sub-family B (MDR/TAP), member 9	protein-coding
unique_peak2-35067-5-7--0.704380336005853-1.01466476204226	chr16	13818789	13819212	+	0	NA	promoter-TSS (NM_010946)	promoter-TSS (NM_010946)	-370	NM_010946	18203	Mm.380410	NM_010946	ENSMUSG00000022681	Ntan1	-	N-terminal Asn amidase	protein-coding
common_peak2-25868-7-4-0.477162735410827-1.09384600808989	chr19	43612892	43613242	+	0	NA	Intergenic	RMER17B|LTR|ERVK	-13972	NM_010324	14718	Mm.19039	NM_010324	ENSMUSG00000025190	Got1	AI789014|Got-1|cAspAT|cCAT	glutamate oxaloacetate transaminase 1, soluble	protein-coding
common_peak2-29785-17-17-0.0483713367627256-0.325169893479371	chr6	89345220	89346010	+	0	NA	intron (NM_001167736, intron 5 of 6)	intron (NM_001167736, intron 5 of 6)	-33008	NM_008881	18844	Mm.3789	NM_008881	ENSMUSG00000030084	Plxna1	2600013D04Rik|NOV|PlexA1|Plxn1|mKIAA4053	plexin A1	protein-coding
common_peak1-14024-11-13--0.298661337805991-0.337263207250336	chr2	113640613	113641299	+	0	NA	intron (NM_009162, intron 2 of 5)	intron (NM_009162, intron 2 of 5)	28292	NM_009162	20394	Mm.4836	NM_009162	ENSMUSG00000023236	Scg5	7B2|AI325031|Sgne-1|Sgne1	secretogranin V	protein-coding
common_peak1-11216-18-13-0.505564229170747-0.625923329873571	chr15	79050932	79051809	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-8233	NM_008837	18693	Mm.259464	NM_008837	ENSMUSG00000068206	Pick1	Prkcabp	protein interacting with C kinase 1	protein-coding
common_peak1-11244-26-20-0.535581669379702-0.738267116931592	chr15	79934497	79935677	+	0	NA	intron (NM_207708, intron 1 of 3)	intron (NM_207708, intron 1 of 3)	13323	NM_207708	20972	Mm.230301	NM_009303	ENSMUSG00000022415	Syngr1	R75468|Syngr1b|p29	synaptogyrin 1	protein-coding
common_peak2-20330-20-24--0.155781405183531-0.319918318021793	chr10	128548437	128549358	+	0	NA	exon (NM_146267, exon 1 of 1)	exon (NM_146267, exon 1 of 1)	582	NM_146267	257667	Mm.377271	NM_146267	ENSMUSG00000042801	Olfr769	MOR114-14	olfactory receptor 769	protein-coding
common_peak2-29305-9-7-0.18961340640422-1.05908390183068	chr5	145167875	145168462	+	0	NA	Intergenic	Intergenic	48774	NR_102373	100579137		NR_102372		Dmr	-	Dmrt1 related	ncRNA
common_peak2-29343-13-8-0.608547029195456-0.660903317613904	chr5	148996168	148996656	+	0	NA	intron (NM_029920, intron 4 of 14)	(TTC)n|Simple_repeat|Simple_repeat	215068	NM_007513	11987	Mm.275489	NM_007513	ENSMUSG00000041313	Slc7a1	4831426K01Rik|AI447493|Atrc-1|Atrc1|Cat1|Rec-1|Rev-1|mCAT-1	solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	protein-coding
unique_peak1-5884-15-3-2.01216475055566-3.03427613622886	chr6	86607381	86608151	+	0	NA	intron (NM_010751, intron 3 of 5)	intron (NM_010751, intron 3 of 5)	11387	NM_010751	17119	Mm.279580	NM_010751	ENSMUSG00000001156	Mxd1	AW122478|Mad|Mad1	MAX dimerization protein 1	protein-coding
unique_peak1-3002-26-8-1.75797409071615-3.2467506969819	chr17	83982173	83983268	+	0	NA	Intergenic	Intergenic	48515	NM_153512	225030	Mm.223506	NM_153512	ENSMUSG00000045053	Kcng3	KV6.3|Kv10.1a|Kv10.1b	potassium voltage-gated channel, subfamily G, member 3	protein-coding
common_peak1-18017-17-22--0.305265617851975-0.348739088570342	chr7	141467239	141468083	+	0	NA	intron (NM_001081331, intron 5 of 7)	intron (NM_001081331, intron 5 of 7)	-50881	NM_007400	11489	Mm.439714	NM_007400	ENSMUSG00000054555	Adam12	Mltna|mKIAA4001	a disintegrin and metallopeptidase domain 12 (meltrin alpha)	protein-coding
common_peak1-8456-15-11-0.4272022498345-0.503257505534083	chr10	79983735	79984393	+	0	NA	intron (NM_026094, intron 27 of 27)	L1MB5|LINE|L1	17805	NM_026094	67331	Mm.52511	NM_026094	ENSMUSG00000003341	Atp8b3	1700042F02Rik|1700056N23Rik|ATPIK|SAPLT	ATPase, class I, type 8B, member 3	protein-coding
common_peak1-8808-47-27-1.12748650270894-3.22913603282893	chr11	20858546	20859679	+	0	NA	Intergenic	Intergenic	-128001	NM_173752	216551	Mm.76694	NM_173752	ENSMUSG00000042363	Lgalsl	1110067D22Rik|A530071M23|Grpa|Hspc159|Lgalsla	lectin, galactoside binding-like	protein-coding
common_peak1-18374-39-21-1.15632962828186-2.80248000195415	chr8	70633373	70635075	+	0	NA	Intergenic	ORR1B1|LTR|MaLR	-135751	NM_177698	234353	Mm.32525	NM_027626	ENSMUSG00000030465	Psd3	4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D	pleckstrin and Sec7 domain containing 3	protein-coding
common_peak1-17068-31-26-0.470351168649655-0.720235944639222	chr6	106799153	106800276	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-49633	NM_175357	58799	Mm.290085	NM_021449		Crbn	2610203G15Rik|2900045O07Rik|AF229032|AW108261|piL	cereblon	protein-coding
common_peak1-17816-8-9--0.316705676939792-1.03275496310833	chr7	101964377	101964807	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-1394555	NM_011858	23966	Mm.254610	NM_011858	ENSMUSG00000048078	Tenm4	Doc4|ELM2|Odz4|R75022|Ten-m4|l(7)-3Rn|l7Rn3|mKIAA1302	teneurin transmembrane protein 4	protein-coding
unique_peak1-7200-14-1-2.89921616035764-3.91338994363176	chr9	66251777	66252505	+	0	NA	intron (NM_145617, intron 17 of 77)	L1Md_F|LINE|L1	53884	NM_145617	235439	Mm.244179	NM_145617	ENSMUSG00000038664	Herc1	2810449H11Rik|B230218H07|D130015N03Rik|tbl	hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1	protein-coding
unique_peak1-4340-9-0-3.18961340640422-3.01029995663981	chr2	153307739	153308178	+	0	NA	intron (NM_001134300, intron 2 of 10)	intron (NM_001134300, intron 2 of 10)	-37743	NM_001001986	329540	Mm.50600	NM_001001986	ENSMUSG00000061411	Nol4l	4931410H15|8430427H17Rik|AI429157|Gm1636	nucleolar protein 4-like	protein-coding
common_peak1-10818-33-48--0.28337228158968-0.459173512026158	chr14	99298667	99299752	+	0	NA	Intergenic	Intergenic	146146	NM_175245	76789	Mm.38912	NM_175245	ENSMUSG00000033186	Mzt1	2410129H14Rik|AI120158|Mozart1	mitotic spindle organizing protein 1	protein-coding
common_peak2-31325-44-47-0.236930333847379-0.510148353955622	chr8	81015099	81015850	+	0	NA	Intergenic	Intergenic	17353	NM_001252089	19656	Mm.24718	NM_009033	ENSMUSG00000037070	Rbmxl1	Hnrpg|Rbmx|Rbmxrt	RNA binding motif protein, X linked-like-1	protein-coding
unique_peak1-2014-12-9-0.326847890200276-0.459837087125828	chr15	7891162	7891896	+	0	NA	intron (NM_001081402, intron 10 of 17)	intron (NM_001081402, intron 10 of 17)	125979	NM_001301357	14573	Mm.4679	NM_010275	ENSMUSG00000022144	Gdnf	AI385739	glial cell line derived neurotrophic factor	protein-coding
unique_peak2-33269-4-11--1.6084230145744-1.68134727924692	chr10	128704265	128704963	+	0	NA	TTS (NM_146544)	TTS (NM_146544)	1763	NM_146544	258537	Mm.271447	NM_146544	ENSMUSG00000062914	Olfr777	MOR114-9	olfactory receptor 777	protein-coding
common_peak1-16040-23-20-0.32945008173032-0.471456499375596	chr5	36722388	36723437	+	0	NA	intron (NM_030889, intron 1 of 26)	intron (NM_030889, intron 1 of 26)	17876	NM_030889	81840	Mm.34113	NM_030889	ENSMUSG00000029093	Sorcs2	N28137|mKIAA1329	sortilin-related VPS10 domain containing receptor 2	protein-coding
unique_peak2-34372-6-9--0.75652998450706-1.11707584880836	chr13	111346313	111346796	+	0	NA	Intergenic	Intergenic	161302	NM_152804	20620	Mm.380	NM_152804	ENSMUSG00000021701	Plk2	Snk	polo-like kinase 2	protein-coding
common_peak2-25147-59-114--0.520126050071797-1.60166555972577	chr18	46524107	46526001	+	0	NA	Intergenic	ORR1E|LTR|MaLR	-53472	NM_001160399	240261	Mm.329416	NM_001160399	ENSMUSG00000071855	Ccdc112	8430438M01Rik|AW108467	coiled-coil domain containing 112	protein-coding
unique_peak1-3106-9-1-2.18961340640422-2.31132995230379	chr18	25724942	25725457	+	0	NA	intron (NM_001146294, intron 2 of 12)	intron (NM_001146294, intron 2 of 12)	187285	NM_133195	108013	Mm.266435	NM_133195	ENSMUSG00000024268	Celf4	A230070D14Rik|BRUNOL-4|Brul4|Brunol4|C130060B05Rik	CUGBP, Elav-like family member 4	protein-coding
common_peak2-29811-14-13-0.0918612383000403-0.332077462497413	chr6	91205837	91206538	+	0	NA	intron (NM_001081437, intron 5 of 16)	intron (NM_001081437, intron 5 of 16)	43429	NM_007992	14115	Mm.249146	NM_007992	ENSMUSG00000064080	Fbln2	5730577E14Rik|FIBL-2	fibulin 2	protein-coding
unique_peak1-2888-13-2-2.19350952991661-3.03832868024006	chr17	42968840	42969449	+	0	NA	intron (NM_009847, intron 5 of 17)	intron (NM_009847, intron 5 of 17)	44229	NM_009847	12488	Mm.218637	NM_009847	ENSMUSG00000061665	Cd2ap	AL024079|C78928|METS-1|Mets1	CD2-associated protein	protein-coding
common_peak1-9116-50-71--0.12898468496336-0.340664206019335	chr11	73176391	73177974	+	0	NA	Intergenic	L1Md_A|LINE|L1	-7566	NM_001172686	258924	Mm.236410	NM_146922	ENSMUSG00000063881	Olfr376	MOR135-12	olfactory receptor 376	protein-coding
common_peak1-11931-19-54--1.37867238686297-3.56455313593768	chr17	75005674	75006333	+	0	NA	intron (NM_007566, intron 22 of 72)	intron (NM_007566, intron 22 of 72)	78368	NM_007566	12211	Mm.442564	NM_007566	ENSMUSG00000024073	Birc6	A430032G04Rik|A430040A19Rik|AA501170|Bruce|D630005A10Rik|mKIAA1289	baculoviral IAP repeat-containing 6	protein-coding
unique_peak1-2066-17-5-1.63333383748388-2.19184853030482	chr15	34046233	34046974	+	0	NA	intron (NM_026002, intron 5 of 11)	intron (NM_026002, intron 5 of 11)	34129	NM_026002	67154	Mm.130883	NM_026002	ENSMUSG00000022255	Mtdh	2610103J23Rik|3D3|3D3/Lyric|AEG-1|AV353288|D8Bwg1112e|Lyric	metadherin	protein-coding
common_peak1-12093-9-8-0.0196884049619079-1.03275496310833	chr17	25115625	25115994	+	0	NA	intron (NM_020608, intron 11 of 20)	intron (NM_020608, intron 11 of 20)	-18241	NM_198937	52009	Mm.371601	NM_198937	ENSMUSG00000024165	Hn1l	2810430B18Rik|AL022629|C16orf34|D17Ertd441e	hematological and neurological expressed 1-like	protein-coding
common_peak2-27077-54-130--0.860337239907716-3.96868803451025	chr3	33799472	33800989	+	0	NA	Intergenic	ID_B1|SINE|B4	-56998	NM_026222	51938	Mm.275710	NM_026222	ENSMUSG00000027676	Ccdc39	4921507O14Rik|AI447426|AI844750|D3Ertd789e|b2b1304Clo|b2b1735Clo|b2b2025.1Clo	coiled-coil domain containing 39	protein-coding
unique_peak1-2238-14-4-1.57728806547028-2.4322161449009	chr15	76327428	76328010	+	0	NA	intron (NM_008296, intron 4 of 11)	intron (NM_008296, intron 4 of 11)	14529	NM_010046	13350	Mm.22633	NM_010046	ENSMUSG00000022555	Dgat1	ARAT|C75990|D15Ertd23e|Dgat	diacylglycerol O-acyltransferase 1	protein-coding
common_peak2-21245-63-71-0.268387589628277-0.653467308648399	chr11	68900969	68902334	+	0	NA	promoter-TSS (NM_009497)	promoter-TSS (NM_009497)	-379	NM_009497	22318	Mm.28643	NM_009497	ENSMUSG00000020894	Vamp2	Syb-2|Syb2|sybII	vesicle-associated membrane protein 2	protein-coding
unique_peak1-6116-6-3-0.565398110380302-1.08602067057793	chr6	128361370	128361844	+	0	NA	exon (NM_133927, exon 10 of 12)	exon (NM_133927, exon 10 of 12)	11823	NM_001162858	60345	Mm.269883	NM_021717	ENSMUSG00000001520	Nrip2	AW491344|NIX1	nuclear receptor interacting protein 2	protein-coding
common_peak1-17906-62-91--0.112810497254928-0.345455084168684	chr7	123123530	123124628	+	0	NA	intron (NM_001025559, intron 1 of 15)	intron (NM_001025559, intron 1 of 15)	14521	NM_011445	20679	Mm.323365	NM_011445	ENSMUSG00000051910	Sox6	AI987981|SOX-LZ	SRY (sex determining region Y)-box 6	protein-coding
common_peak2-24066-11-7-0.508693584251613-1.21681515183528	chr16	30189218	30189628	+	0	NA	Intergenic	Intergenic	78195	NM_027904	71756	Mm.290614	NM_027904	ENSMUSG00000023176	Cpn2	1300018K11Rik	carboxypeptidase N, polypeptide 2	protein-coding
common_peak1-15727-59-61-0.371167690485703-0.858683394889021	chr4	141571923	141574054	+	0	NA	Intergenic	Intergenic	-5422	NM_177868	329977	Mm.252019	NM_028429	ENSMUSG00000051435	Fhad1	2900090M10Rik|B230311F11	forkhead-associated (FHA) phosphopeptide binding domain 1	protein-coding
unique_peak1-6719-7-2-1.21412832957703-1.45399745587252	chr8	41017400	41017885	+	0	NA	Intergenic	Intergenic	-289610	NM_001113326	20288	Mm.239291	NM_031195	ENSMUSG00000025044	Msr1	MRS-A|MSR|MSR-A|SR-AI|SR-AII|Scara1|Scvr	macrophage scavenger receptor 1	protein-coding
unique_peak1-7087-15-5-1.4272022498345-1.61682445937017	chr9	31290162	31290946	+	0	NA	Intergenic	RLTR6-int|LTR|ERV1	-18731	NM_144936	235135	Mm.390134	NM_144936	ENSMUSG00000041737	Tmem45b	BC018222	transmembrane protein 45b	protein-coding
unique_peak1-4463-8-8--0.164702583494742-1.00793137938329	chr2	180218098	180218605	+	0	NA	Intergenic	Intergenic	-16330	NM_018766	18216	Mm.301712	NM_018766	ENSMUSG00000027568	Ntsr1	NT-1R|NTR-1|NTR1	neurotensin receptor 1	protein-coding
unique_peak2-36255-0-6--3.64748585253182-1.56314192529759	chr2	52603463	52603868	+	0	NA	Intergenic	Intergenic	-2482	NM_019667	56324	Mm.263639	NM_019667	ENSMUSG00000055371	Stam2	1200004O12Rik|5730456G07Rik|BB145015|Hbp	signal transducing adaptor molecule (SH3 domain and ITAM motif) 2	protein-coding
common_peak2-22200-16-32--0.926130477090392-1.31432283146954	chr12	110977996	110979262	+	0	NA	promoter-TSS (NR_029878)	promoter-TSS (NR_029878)	-91	NR_029878	723857		NR_029878	miRBase:MI0000794	Mir377	Mirn377|mmu-mir-377	microRNA 377	ncRNA
unique_peak2-38720-1-5--2.2120195109379-1.32905871926422	chr7	112201855	112202246	+	0	NA	Intergenic	Intergenic	-2712	NM_146358	258355	Mm.377452	NM_146358	ENSMUSG00000073914	Olfr677	MOR32-11	olfactory receptor 677	protein-coding
unique_peak1-3756-8-3-1.00522241794757-1.39487600375387	chr19	53893451	53893920	+	0	NA	intron (NM_001170847, intron 5 of 13)	B4A|SINE|B4	-73036	NM_011050	18569	Mm.1605	NM_011050	ENSMUSG00000024975	Pdcd4	D19Ucla1|Ma3|Tis	programmed cell death 4	protein-coding
unique_peak1-4028-11-4-1.18676548936425-1.68134727924692	chr2	49813264	49813870	+	0	NA	Intergenic	B3A|SINE|B2	-108382	NR_033304	320343	Mm.130607	NM_177139	ENSMUSG00000050447	Lypd6	E130115E03Rik	LY6/PLAUR domain containing 6	protein-coding
unique_peak2-37682-3-9--1.73591118484664-1.57096726280955	chr5	97111228	97111679	+	0	NA	intron (NM_175473, intron 33 of 73)	intron (NM_175473, intron 33 of 73)	-110951	NM_013470	11745	Mm.7214	NM_013470	ENSMUSG00000029484	Anxa3	Anx3	annexin A3	protein-coding
unique_peak2-39408-3-8--1.58390809140159-1.39487600375387	chr9	34993311	34993823	+	0	NA	3' UTR (NM_001177845, exon 7 of 7)	3' UTR (NM_001177845, exon 7 of 7)	-9995	NM_027030	69305	Mm.229110	NM_027030	ENSMUSG00000032040	Dcps	1700001E16Rik|AA408441	decapping enzyme, scavenger	protein-coding
common_peak1-14141-16-7-1.11826364226806-1.23399803405144	chr2	131427238	131428177	+	0	NA	Intergenic	Intergenic	-39686	NM_013460	11550	Mm.389380	NM_013460		Adra1d	Adra-1|Adra1|Adra1a|Gpcr8|Spr8|[a]1d|alpha1D-AR	adrenergic receptor, alpha 1d	protein-coding
common_peak1-14358-46-36-0.688542577619851-1.61783625824857	chr2	166995300	166996987	+	0	NA	intron (NM_008420, intron 1 of 1)	intron (NM_008420, intron 1 of 1)	18175	NM_008420	16500	Mm.205341	NM_008420		Kcnb1	Kcr1-1|Kv2.1|Shab	potassium voltage gated channel, Shab-related subfamily, member 1	protein-coding
unique_peak1-3048-8-1-2.00522241794757-2.05605744720049	chr18	5803262	5803773	+	0	NA	Intergenic	Intergenic	-211082	NR_033552	791318	Mm.84339	NR_033552	ENSMUSG00000063087	Gm10125	ENSMUSG00000063087|Zeb1os	predicted gene 10125	ncRNA
unique_peak2-37191-6-8--0.60452689106201-1.03789460276074	chr4	57793777	57794249	+	0	NA	Intergenic	Intergenic	-64107	NM_009649	11641	Mm.467752	NM_009649	ENSMUSG00000038729	Akap2	AA959716|AI649048|Akap-2|Akap-kl|B230340M18Rik|Prka2	A kinase (PRKA) anchor protein 2	protein-coding
common_peak2-20558-7-14--1.10779976531033-0.817533494790411	chr10	71284760	71285342	+	0	NA	Intergenic	L1Md_A|LINE|L1	158387	NR_003644	108950	Mm.212793	NM_175390	ENSMUSG00000043859	1700049L16Rik	-	hematological and neurological expressed 1-like pseudogene	pseudo
common_peak2-23607-14-12-0.198776442216552-0.373562084705529	chr15	81511903	81512321	+	0	NA	intron (NM_145993, intron 8 of 16)	B1_Mus1|SINE|Alu	15605	NM_001164320	214685	Mm.393287	NM_001164320	ENSMUSG00000063765	Chadl	AY100452|D930017K21Rik	chondroadherin-like	protein-coding
common_peak1-8856-28-31-0.0529591198214625-0.314603908022751	chr11	32221252	32222630	+	0	NA	Intergenic	MTEb|LTR|MaLR	21872	NM_175000	216635	Mm.338482	NM_175000	ENSMUSG00000020295	Hbq1a	A230090E05Rik|Gm876|Hbq1|Hbqt2	hemoglobin, theta 1A	protein-coding
unique_peak1-651-16-0-4.11826364226806-5.41853992195166	chr10	56468928	56469653	+	0	NA	Intergenic	Intergenic	372184	NM_010288	14609	Mm.378921	NM_010288	ENSMUSG00000050953	Gja1	AU042049|AW546267|Cnx43|Cx43|Cx43alpha1|Gja-1|Npm1|connexin43	gap junction protein, alpha 1	protein-coding
common_peak2-24081-9-5-0.604650905683064-1.21398586181642	chr16	31498457	31498830	+	0	NA	Intergenic	ORR1B2|LTR|MaLR	69804	NM_001122683	71911	Mm.293470	NM_175177	ENSMUSG00000046598	Bdh1	2310032J20Rik|AI327223|Bdh	3-hydroxybutyrate dehydrogenase, type 1	protein-coding
common_peak1-12356-29-47--0.472672420106045-0.683734619884041	chr17	56673136	56674109	+	0	NA	Intergenic	(TGGA)n|Simple_repeat|Simple_repeat	-21716	NM_011483	20834	Mm.76862	NM_011483	ENSMUSG00000044526	Znrf4	1700094M01Rik|Ssrzf1|spzn	zinc and ring finger 4	protein-coding
unique_peak2-33869-11-16--0.578769256998726-0.503257505534083	chr12	21424823	21425619	+	0	NA	Intergenic	Intergenic	-1924	NM_011739	22630	Mm.289630	NM_011739	ENSMUSG00000076432	Ywhaq	2700028P07Rik|AA409740|AU021156|R74690	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide	protein-coding
common_peak2-31020-12-11-0.0638134843664826-0.337263207250336	chr8	11476929	11477596	+	0	NA	intron (NM_011227, intron 1 of 1)	intron (NM_011227, intron 1 of 1)	1237	NM_011227	19332	Mm.37632	NM_011227		Rab20	AA536966|D8Ertd350e	RAB20, member RAS oncogene family	protein-coding
common_peak1-13219-13-13--0.0288828914198356-0.309074325783021	chr19	24289522	24290020	+	0	NA	intron (NM_011597, intron 1 of 22)	B1_Mur2|SINE|Alu	9745	NM_011597	21873	Mm.104744	NM_011597	ENSMUSG00000024812	Tjp2	ZO-2	tight junction protein 2	protein-coding
unique_peak1-4790-9-1-2.18961340640422-2.31132995230379	chr3	131665798	131666302	+	0	NA	Intergenic	Intergenic	-82206	NM_020265	56811	Mm.103593	NM_020265	ENSMUSG00000028031	Dkk2	-	dickkopf homolog 2 (Xenopus laevis)	protein-coding
unique_peak1-5115-7-1-1.79909083029819-1.80617997398389	chr5	36044420	36044882	+	0	NA	intron (NM_194344, intron 13 of 17)	intron (NM_194344, intron 13 of 17)	-22222	NM_030127	78558	Mm.274255	NM_030127	ENSMUSG00000029096	Htra3	2210021K23Rik|9530081K03Rik|Prsp|Tasp	HtrA serine peptidase 3	protein-coding
unique_peak1-4261-9-2-1.60465090568306-1.87199725847353	chr2	131209061	131209558	+	0	NA	Intergenic	B1_Mur3|SINE|Alu	-30681	NM_178607	51902	Mm.477523	NM_178607	ENSMUSG00000048911	Rnf24	2810473M14Rik|4930505A13Rik|AI317164|C86507|D2Ertd504e	ring finger protein 24	protein-coding
unique_peak2-33959-3-6--1.22133801201688-1.08602067057793	chr12	80244652	80245062	+	0	NA	intron (NM_009705, intron 2 of 7)	L1Md_F2|LINE|L1	13082	NM_009705	11847	Mm.3506	NM_009705	ENSMUSG00000021125	Arg2	AII|AU022422	arginase type II	protein-coding
unique_peak1-2336-15-10-0.552733131918359-0.604422558181019	chr15	84239215	84240026	+	0	NA	intron (NM_001163145, intron 3 of 4)	intron (NM_001163145, intron 3 of 4)	37907	NM_001163145	72301	Mm.275387	NM_001163145	ENSMUSG00000062760	1810041L15Rik	Kiaa1644	RIKEN cDNA 1810041L15 gene	protein-coding
common_peak2-21137-13-12-0.0780323124966764-0.334470287753051	chr11	54860645	54861216	+	0	NA	Intergenic	Cheshire|DNA|MER1_type	-13957	NM_013472	11749	Mm.265347	NM_013472	ENSMUSG00000018340	Anxa6	AW107198|Anx6|AnxVI|Cabm|Camb	annexin A6	protein-coding
unique_peak1-6727-8-2-1.42025991722641-1.65811743852845	chr8	44569837	44570385	+	0	NA	Intergenic	L1ME3A|LINE|L1	43380	NM_001009547	382007	Mm.55952	NM_001009547	ENSMUSG00000063900	Adam26b	-	a disintegrin and metallopeptidase domain 26B	protein-coding
common_peak1-9604-227-323-0.321893663069552-2.31092181403833	chr11	120346764	120350857	+	0	NA	intron (NM_027204, intron 3 of 4)	intron (NM_027204, intron 3 of 4)	2827	NM_027204	56282	Mm.133851	NM_027204		Mrpl12	0610034O11Rik|1500031N16Rik|MRP-L12|Rpml12	mitochondrial ribosomal protein L12	protein-coding
common_peak1-12449-34-27-0.574713604943662-1.01480426461253	chr17	83214653	83216097	+	0	NA	Intergenic	Intergenic	262190	NR_045094	100503434	Mm.187281	NR_045094		Gm19689	-	predicted gene, 19689	ncRNA
unique_peak2-34636-4-8--1.19338551529556-1.21878474469819	chr14	99364950	99365339	+	0	NA	Intergenic	(TTTG)n|Simple_repeat|Simple_repeat	80211	NM_175245	76789	Mm.38912	NM_175245	ENSMUSG00000033186	Mzt1	2410129H14Rik|AI120158|Mozart1	mitotic spindle organizing protein 1	protein-coding
common_peak1-11053-35-43--0.0280613601747932-0.301029995663985	chr15	55071515	55072783	+	0	NA	intron (NM_145470, intron 8 of 8)	intron (NM_145470, intron 8 of 8)	-67156	NM_181277	12818	Mm.297859	NM_181277	ENSMUSG00000022371	Col14a1	5730412L22Rik|AW108078	collagen, type XIV, alpha 1	protein-coding
common_peak2-23725-35-61--0.522826051924371-0.980945783223878	chr15	94588988	94589893	+	0	NA	intron (NM_178789, intron 3 of 7)	intron (NM_178789, intron 3 of 7)	129824	NM_178789	320709	Mm.74873	NM_178789	ENSMUSG00000063296	Tmem117	B930062P21Rik	transmembrane protein 117	protein-coding
unique_peak1-4243-11-4-1.18676548936425-1.68134727924692	chr2	126945582	126946107	+	0	NA	intron (NM_144818, intron 9 of 17)	MTA_Mm-int|LTR|MaLR	13846	NM_144818	215387	Mm.29786	NM_144818	ENSMUSG00000034906	Ncaph	A730011O11Rik|Brrn1|HCAP-H|mKIAA0074	non-SMC condensin I complex, subunit H	protein-coding
common_peak1-12014-26-48--0.686810751956746-1.2112076832151	chr17	15066000	15066910	+	0	NA	intron (NM_175173, intron 3 of 24)	intron (NM_175173, intron 3 of 24)	13674	NM_175173	71682	Mm.122698	NM_175173	ENSMUSG00000046991	Wdr27	0610012K18Rik	WD repeat domain 27	protein-coding
common_peak1-11028-13-6-0.971117108580164-1.01572999746118	chr15	39659442	39659911	+	0	NA	exon (NM_022722, exon 5 of 10)	exon (NM_022722, exon 5 of 10)	29340	NM_001164466	64705	Mm.275974	NM_022722	ENSMUSG00000022304	Dpys	1200017I10Rik|1300004I01Rik|DHP|DHPase	dihydropyrimidinase	protein-coding
common_peak2-29554-11-5-0.923731083530457-1.477227296591	chr6	42261746	42262140	+	0	NA	intron (NM_013491, intron 20 of 22)	MIR|SINE|MIR	12696	NM_001286584	76156	Mm.234314	NM_029528	ENSMUSG00000029861	Fam131b	6330503C03Rik|6530406I18Rik|AV277466	family with sequence similarity 131, member B	protein-coding
common_peak1-12587-33-47--0.253624938195627-0.423463616707761	chr18	20745568	20746683	+	0	NA	intron (NM_007883, intron 8 of 14)	RMER16-int|LTR|ERVK	29508	NM_007883	13511	Mm.345891	NM_007883	ENSMUSG00000044393	Dsg2	AA408168|D18Ertd293e	desmoglein 2	protein-coding
unique_peak1-3555-8-2-1.42025991722641-1.65811743852845	chr19	24659096	24659621	+	0	NA	Intergenic	Intergenic	-29041	NM_008846	18719	Mm.217214	NM_008846	ENSMUSG00000024867	Pip5k1b	PI4P5K-I[b]|PIP5K1-beta|PIP5KIbeta|Pipk5b|STM7	phosphatidylinositol-4-phosphate 5-kinase, type 1 beta	protein-coding
unique_peak2-35356-4-12--1.72390023199434-1.85743853830261	chr17	26243647	26244133	+	0	NA	Intergenic	Intergenic	-6371	NM_021793	60455	Mm.304656	NM_021793	ENSMUSG00000024180	Tmem8	AW490096|M83|Tmem8a	transmembrane protein 8 (five membrane-spanning domains)	protein-coding
common_peak1-9406-34-63--0.617931472998734-1.219227950326	chr11	100938551	100939648	+	0	NA	promoter-TSS (NM_010475)	promoter-TSS (NM_010475)	-626	NM_010475	15485	Mm.188939	NM_010475	ENSMUSG00000019301	Hsd17b1	17HSDB1|17beta-HSD|E2DH|Hsd17ba	hydroxysteroid (17-beta) dehydrogenase 1	protein-coding
common_peak1-16936-38-62--0.405827264201386-0.688998294217078	chr6	83136527	83137723	+	0	NA	intron (NM_001198866, intron 6 of 31)	intron (NM_001198866, intron 6 of 31)	7542	NM_007835	13191	Mm.6919	NM_007835	ENSMUSG00000031865	Dctn1	AL022633|Glued|p150|p150<glued>	dynactin 1	protein-coding
unique_peak2-34674-2-12--2.61789397440441-2.55640854263862	chr15	7129500	7129959	+	0	NA	intron (NM_001113386, intron 14 of 16)	intron (NM_001113386, intron 14 of 16)	39187	NM_013584	16880	Mm.149720	NM_013584	ENSMUSG00000054263	Lifr	A230075M04Rik|AW061234|LIF	leukemia inhibitory factor receptor	protein-coding
common_peak1-18435-40-46-0.104386831073461-0.357020589591567	chr8	79294218	79296025	+	0	NA	intron (NR_028579, intron 1 of 1)	L1Md_F2|LINE|L1	128951	NR_028579	100039211	Mm.367571	NR_028579	ENSMUSG00000074235	Gm10649	ENSMUSG00000074235	predicted gene 10649	ncRNA
common_peak2-25027-9-4-0.867685311516858-1.36011389749466	chr18	24717878	24718167	+	0	NA	Intergenic	Intergenic	-29317	NM_144861	225283	Mm.28427	NM_144861	ENSMUSG00000040446	Rprd1a	C77387|mKIAA4077	regulation of nuclear pre-mRNA domain containing 1A	protein-coding
common_peak1-18466-23-11-1.13680500378792-1.66030262873422	chr8	84635348	84636341	+	0	NA	intron (NM_001297596, intron 24 of 24)	L1Md_T|LINE|L1	290641	NM_001254747	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
unique_peak1-1855-7-0-2.79909083029819-2.40823996531185	chr14	52074443	52074964	+	0	NA	exon (NM_009487, exon 2 of 5)	exon (NM_009487, exon 2 of 5)	3066	NM_009486	22301	Mm.482572	NM_009486	ENSMUSG00000070448	Vmn2r89	V2r10|V2r11	vomeronasal 2, receptor 89	protein-coding
common_peak2-24616-32-37-0.0311645057760748-0.312460117298692	chr17	33909293	33910176	+	0	NA	Intergenic	B3|SINE|B2	8786	NM_020581	57875	Mm.196189	NM_020581		Angptl4	Arp4|Bk89|Fiaf|Hfarp|Ng27|Pgar|Pgarg|Pp1158	angiopoietin-like 4	protein-coding
unique_peak1-3355-7-1-1.79909083029819-1.80617997398389	chr19	32964199	32964638	+	0	NA	Intergenic	Intergenic	132351	NM_008960	19211	Mm.245395	NM_008960	ENSMUSG00000013663	Pten	2310035O07Rik|A130070J02Rik|AI463227|B430203M17Rik|MMAC1|TEP1	phosphatase and tensin homolog	protein-coding
common_peak2-20163-5-8--0.874305337448166-1.10484139239135	chr1	170885213	170885453	+	0	NA	Intergenic	L1_Rod|LINE|L1	464559	NR_105766	102465178		NR_105766	miRBase:MI0021876	Mir6348	mmu-mir-6348	microRNA mir-6348	ncRNA
common_peak2-20552-12-8-0.478850983645327-0.562038191119709	chr10	69351160	69351621	+	0	NA	intron (NM_170728, intron 16 of 40)	intron (NM_170728, intron 16 of 40)	-36890	NM_170687	11735	Mm.235960	NM_009670	ENSMUSG00000069601	Ank3	2900054D09Rik|AI314020|Ank-3|AnkG|Ankyrin-3|Ankyrin-G	ankyrin 3, epithelial	protein-coding
common_peak2-22281-31-27-0.41788374875552-0.64171680596148	chr13	9494506	9495403	+	0	NA	intron (NM_001081426, intron 2 of 36)	ID4|SINE|ID	219183	NM_001081426	208440	Mm.217326	NM_172459	ENSMUSG00000048264	Dip2c	2900024P20Rik|9630044M06|mKIAA0934	DIP2 disco-interacting protein 2 homolog C (Drosophila)	protein-coding
unique_peak1-2346-9-1-2.18961340640422-2.31132995230379	chr15	85621745	85622179	+	0	NA	intron (NM_011144, intron 6 of 7)	intron (NM_011144, intron 6 of 7)	20165	NM_001164626	72355	Mm.33706	NM_197998	ENSMUSG00000064284	Cdpf1	2210021J22Rik	cysteine rich, DPF motif domain containing 1	protein-coding
common_peak2-25890-19-31--0.597312673338314-0.721233599456203	chr19	45017055	45018349	+	0	NA	intron (NM_001081225, intron 5 of 19)	intron (NM_001081225, intron 5 of 19)	12093	NM_001081225	226151	Mm.212609	NM_172638	ENSMUSG00000036097	Fam178a	3632432H19|6030443O07Rik|AU014917	family with sequence similarity 178, member A	protein-coding
unique_peak1-5939-11-3-1.50869358425161-1.95434855131066	chr6	90749591	90750290	+	0	NA	intron (NM_001134384, intron 1 of 13)	intron (NM_001134384, intron 1 of 13)	10177	NM_001134384	232227	Mm.196943	NM_182784	ENSMUSG00000034312	Iqsec1	AW561907|BC026481|BRAG2|D6Ertd349e|cI-43	IQ motif and Sec7 domain 1	protein-coding
common_peak2-32394-17-20--0.174021084573723-0.306598483909156	chrX	135742472	135743218	+	0	NA	Intergenic	(CAGA)n|Simple_repeat|Simple_repeat	-1738	NM_175541	245631	Mm.131001	NM_175541	ENSMUSG00000042515	Mum1l1	9430086K21Rik	melanoma associated antigen (mutated) 1-like 1	protein-coding
common_peak1-18921-10-11--0.228547155712387-0.31137425193576	chr9	44552144	44552809	+	0	NA	intron (NM_145985, intron 9 of 9)	B1_Mus2|SINE|Alu	-9195	NM_153537	102693	Mm.28639	NM_153537	ENSMUSG00000048537	Phldb1	AU041016|D330037A14Rik|Ll5a	pleckstrin homology-like domain, family B, member 1	protein-coding
common_peak2-27268-15-9-0.690236655668294-0.732381977911291	chr3	57301623	57302097	+	0	NA	intron (NM_133784, intron 3 of 6)	B1_Mus1|SINE|Alu	72528	NM_145539	229302	Mm.26618	NM_145539	ENSMUSG00000027801	Tm4sf4	Iltmp	transmembrane 4 superfamily member 4	protein-coding
unique_peak2-35211-0-6--3.64748585253182-1.56314192529759	chr16	87439810	87440215	+	0	NA	intron (NM_016924, intron 1 of 4)	B1_Mus1|SINE|Alu	825	NM_016924	53858	Mm.162406	NM_016924	ENSMUSG00000041079	Rwdd2b	ORF5	RWD domain containing 2B	protein-coding
common_peak1-16328-58-58-0.413306885528655-1.00278553979691	chr5	117115098	117116582	+	0	NA	Intergenic	Intergenic	-74014	NM_026886	68955	Mm.146779	NM_026886	ENSMUSG00000063919	Srrm4	1500001A10Rik|B230202K19Rik|bv|mKIAA1853|nSR100	serine/arginine repetitive matrix 4	protein-coding
unique_peak1-1799-16-1-3.11826364226806-4.46429741251234	chr14	25310804	25311671	+	0	NA	exon (NM_207634, exon 3 of 5)	exon (NM_207634, exon 3 of 5)	1334	NM_011297	20088	Mm.16775	NM_011297	ENSMUSG00000025290	Rps24	-	ribosomal protein S24	protein-coding
unique_peak2-35953-1-9--2.94898510510411-2.31132995230379	chr19	11878473	11878724	+	0	NA	intron (NM_001025307, intron 1 of 10)	B1_Mur4|SINE|Alu	15295	NM_001286543	20908	Mm.272264	NM_011502	ENSMUSG00000041488	Stx3	Syn-3	syntaxin 3	protein-coding
common_peak2-25107-32-29-0.372201423611141-0.621525249893804	chr18	36734926	36735789	+	0	NA	intron (NM_175375, intron 2 of 33)	B2_Mm2|SINE|B2	15100	NM_175375	108857	Mm.482287	NM_175375	ENSMUSG00000024483	Ankhd1	1110004O12Rik|4933432B13Rik|9130019P20Rik|A530027J04Rik|A630021B20Rik|AA571404|Mask|mFLJ00246|mKIAA1085	ankyrin repeat and KH domain containing 1	protein-coding
unique_peak2-34570-3-6--1.22133801201688-1.08602067057793	chr14	66147741	66148142	+	0	NA	Intergenic	Intergenic	64008	NM_001253812	74195	Mm.29719	NM_028811	ENSMUSG00000022031	Elp3	2610507P14Rik|KAT9	elongator acetyltransferase complex subunit 3	protein-coding
common_peak1-15781-16-33--0.969199198982277-1.43262124146305	chr4	155223308	155223838	+	0	NA	intron (NM_010091, intron 1 of 14)	intron (NM_010091, intron 1 of 14)	2052	NM_010091	13542	Mm.3400	NM_010091	ENSMUSG00000029071	Dvl1	Dvl|mKIAA4029	dishevelled, dsh homolog 1 (Drosophila)	protein-coding
common_peak1-11720-46-19-1.57606784836144-5.15525288229598	chr16	32677740	32679956	+	0	NA	intron (NM_016788, intron 12 of 15)	intron (NM_016788, intron 12 of 15)	5608	NM_001289443	51789	Mm.251115	NM_016788	ENSMUSG00000022791	Tnk2	Ack|Ack-1|Ack1|Cdgip|Pyk1	tyrosine kinase, non-receptor, 2	protein-coding
unique_peak2-32870-8-17--1.16470258349474-1.02063122982878	chr10	7189499	7190230	+	0	NA	Intergenic	Intergenic	-23484	NR_045946	619314	Mm.145928	NR_045946		B020014A21Rik	-	RIKEN cDNA B020014A21 gene	ncRNA
common_peak2-20415-9-10--0.269818212233077-1.05503135781948	chr10	25928977	25929343	+	0	NA	Intergenic	RodERV21-int|LTR|ERV1	-20353	NM_001013766	268288	Mm.213322	NM_001013766	ENSMUSG00000051354	Samd3	Gm623	sterile alpha motif domain containing 3	protein-coding
unique_peak1-4110-9-1-2.18961340640422-2.31132995230379	chr2	79577686	79578147	+	0	NA	intron (NM_001290744, intron 2 of 2)	RLTR25A|LTR|ERVK	29979	NM_001290743	75276	Mm.257373	NM_172420	ENSMUSG00000034683	Ppp1r1c	4930565M23Rik|4930579P15Rik	protein phosphatase 1, regulatory (inhibitor) subunit 1C	protein-coding
unique_peak2-36294-8-10--0.454209200689727-1.078512453669	chr2	71589149	71589711	+	0	NA	Intergenic	L2b|LINE|L2	31956	NR_037979	381371	Mm.330284	NM_201366	ENSMUSG00000064263	Gm1631	-	predicted gene 1631	ncRNA
common_peak1-9668-11-8-0.338768582809301-1.14218153353838	chr12	4188169	4188767	+	0	NA	intron (NM_001159536, intron 3 of 21)	intron (NM_001159536, intron 3 of 21)	-45559	NM_001204912	69709	Mm.250552	NM_001204912	ENSMUSG00000096199	Ptrhd1	2410017P09Rik	peptidyl-tRNA hydrolase domain containing 1	protein-coding
common_peak2-27409-11-10-0.0492619656143161-0.31137425193576	chr3	88493190	88493668	+	0	NA	intron (NM_028814, intron 3 of 13)	intron (NM_028814, intron 3 of 13)	3713	NM_028814	74200	Mm.251800	NM_028814	ENSMUSG00000028060	2810403A07Rik	A430106P18Rik|AI256352|AI451678|Blom7|Kiaa0907	RIKEN cDNA 2810403A07 gene	protein-coding
common_peak1-11834-8-12--0.695217300193522-0.475924844171029	chr16	85132464	85132918	+	0	NA	intron (NM_001198823, intron 1 of 17)	intron (NM_001198823, intron 1 of 17)	41261	NM_001198825	11820	Mm.277585	NM_007471	ENSMUSG00000022892	App	Abeta|Abpp|Adap|Ag|Cvap|E030013M08Rik|betaApp	amyloid beta (A4) precursor protein	protein-coding
common_peak1-13329-19-15-0.402687326661686-0.519193887192487	chr19	43563493	43564217	+	0	NA	intron (NM_031396, intron 7 of 10)	intron (NM_031396, intron 7 of 10)	35240	NM_010324	14718	Mm.19039	NM_010324	ENSMUSG00000025190	Got1	AI789014|Got-1|cAspAT|cCAT	glutamate oxaloacetate transaminase 1, soluble	protein-coding
common_peak2-24379-18-22--0.210642804828661-0.321718508207525	chr17	12094307	12095236	+	0	NA	intron (NM_016694, intron 9 of 11)	intron (NM_016694, intron 9 of 11)	-18716	NR_045808	52027	Mm.442257	NR_045808		D17Ertd648e	-	DNA segment, Chr 17, ERATO Doi 648, expressed	ncRNA
common_peak2-28191-17-74--2.01052235229084-7.84737105509427	chr4	116220617	116221907	+	0	NA	Intergenic	MT2_Mm|LTR|ERVL	7286	NM_177670	230657	Mm.291484	NM_177670		Tmem69	A630048M13Rik	transmembrane protein 69	protein-coding
unique_peak2-39385-5-11--1.28934283672701-1.477227296591	chr9	21728676	21729123	+	0	NA	intron (NR_045606, intron 3 of 4)	4.5SRNA|scRNA|scRNA	2833	NM_001253869	235043	Mm.253329	NM_178577	ENSMUSG00000040883	Tmem205	-	transmembrane protein 205	protein-coding
common_peak2-25644-84-45-1.41137210283201-8.30985105211214	chr19	9978128	9979746	+	0	NA	Intergenic	Lx7|LINE|L1	-4914	NM_016692	16319	Mm.29755	NM_016692	ENSMUSG00000024660	Incenp	2700067E22Rik|AU019509|C130081E20|C77457	inner centromere protein	protein-coding
common_peak2-24622-5-5--0.289342836727009-0.909929411522249	chr17	34119025	34119282	+	0	NA	non-coding (NR_033305, exon 1 of 1)	non-coding (NR_033305, exon 1 of 1)	716	NR_033305	433100	Mm.380381	NM_001013793		AA388235	-	expressed sequence AA388235	ncRNA
common_peak2-21659-13-17--0.391452970804544-0.364171515310935	chr11	102697210	102697911	+	0	NA	promoter-TSS (NM_080846)	promoter-TSS (NM_080846)	-50	NM_080846	75689	Mm.44408	NM_080846	ENSMUSG00000020928	Higd1b	2310056K19Rik	HIG1 domain family, member 1B	protein-coding
common_peak2-29700-38-31-0.57145265929853-1.10165134406427	chr6	83027366	83028615	+	0	NA	promoter-TSS (NM_197992)	promoter-TSS (NM_197992)	-394	NM_197992	69837	Mm.12261	NM_197992	ENSMUSG00000069678	Pcgf1	2010002K04Rik|AU024121|Nspc1	polycomb group ring finger 1	protein-coding
unique_peak1-136-11-7-0.508693584251613-1.21681515183528	chr1	65185914	65186482	+	0	NA	Intergenic	Intergenic	-16410	NM_001285882	98303	Mm.348057	NM_175293	ENSMUSG00000044816	D630023F18Rik	AI314969	RIKEN cDNA D630023F18 gene	protein-coding
common_peak1-13039-24-10-1.33377828413042-2.22881803703862	chr19	5725471	5726341	+	0	NA	intron (NM_001114595, intron 1 of 17)	intron (NM_001114595, intron 1 of 17)	411	NM_001114595	114601	Mm.210447	NM_053252	ENSMUSG00000024937	Ehbp1l1	G430002G23Rik	EH domain binding protein 1-like 1	protein-coding
common_peak2-22258-41-26-0.946261202685192-2.21947156384787	chr13	4772302	4772944	+	0	NA	Intergenic	Intergenic	-164213	NM_018859	56043	Mm.251908	NM_018859	ENSMUSG00000045410	Akr1e1	1810061I10Rik|Akr1e2	aldo-keto reductase family 1, member E1	protein-coding
common_peak1-8056-60-100--0.303919621131263-0.688232488689729	chr1	172500430	172502466	+	0	NA	intron (NM_001109985, intron 1 of 9)	B3|SINE|B2	-14207	NM_027528	70729	Mm.487078	NM_027528	ENSMUSG00000038473	Nos1ap	6330408P19Rik|Capon	nitric oxide synthase 1 (neuronal) adaptor protein	protein-coding
common_peak2-28338-9-13--0.617741515653384-0.459837087125828	chr4	134923655	134924140	+	0	NA	Intergenic	Intergenic	-14768	NM_001130477	51796	Mm.1963	NM_016799	ENSMUSG00000028809	Srrm1	AA407769|POP101|Srm160	serine/arginine repetitive matrix 1	protein-coding
common_peak1-18996-68-53-0.815073277134828-2.92509906676189	chr9	58554141	58555785	+	0	NA	intron (NM_028598, intron 2 of 5)	B1_Mus1|SINE|Alu	34403	NM_028598	73673	Mm.205196	NM_028598	ENSMUSG00000074269	Rec114	2410076I21Rik|4930527A11Rik	REC114 meiotic recombination protein	protein-coding
common_peak2-31782-30-20-0.777357986713112-1.30767018140166	chr9	27801769	27802612	+	0	NA	intron (NM_177906, intron 1 of 7)	intron (NM_177906, intron 1 of 7)	203336	NM_177906	330908	Mm.379474	NM_177906	ENSMUSG00000062257	Opcml	2900075O15Rik|3732419F12|AI844366|B930023M13Rik|C230027C17|Gm181|Obcam	opioid binding protein/cell adhesion molecule-like	protein-coding
common_peak1-11088-11-8-0.338768582809301-1.14218153353838	chr15	59481839	59482371	+	0	NA	intron (NM_144549, intron 1 of 2)	intron (NM_144549, intron 1 of 2)	1896	NM_144549	211770	Mm.40298	NM_144549	ENSMUSG00000032501	Trib1	A530090O15Rik|TRB-1|Trb1	tribbles homolog 1 (Drosophila)	protein-coding
unique_peak1-5358-7-4-0.477162735410827-1.09384600808989	chr5	92811011	92811482	+	0	NA	intron (NM_181728, intron 2 of 9)	B1F2|SINE|Alu	-18924	NR_038116	56066	Mm.131723	NM_019494	ENSMUSG00000060183	Cxcl11	Cxc11|H174|I-tac|Ip9|Itac|Scyb11|Scyb9b|b-R1|betaR1	chemokine (C-X-C motif) ligand 11	protein-coding
unique_peak1-3246-17-1-3.21829633820504-4.59734841376773	chr18	64343716	64344601	+	0	NA	intron (NR_045366, intron 2 of 5)	intron (NR_045366, intron 2 of 5)	-69855	NM_009182	20451	Mm.252110	NM_009182	ENSMUSG00000056812	St8sia3	AI847333|ST8SiaIII|Siat8c	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	protein-coding
unique_peak1-4947-6-3-0.565398110380302-1.08602067057793	chr4	95053533	95054047	+	0	NA	Intergenic	RMER1B|Other|Other	-170408	NM_001113412	75578	Mm.276098	NM_029347	ENSMUSG00000028573	Fggy	2310009E04Rik	FGGY carbohydrate kinase domain containing	protein-coding
unique_peak2-39725-2-7--1.91745425626332-1.45399745587252	chr9	121423137	121423528	+	0	NA	Intergenic	Intergenic	-18520	NM_031161	12424	Mm.2619	NM_031161	ENSMUSG00000032532	Cck	-	cholecystokinin	protein-coding
common_peak1-16834-12-5-1.06381348436648-1.78669045979184	chr6	50683005	50683477	+	0	NA	Intergenic	Intergenic	-42873	NR_045984	319981	Mm.131454	NR_045984		C530044C16Rik	-	RIKEN cDNA C530044C16 gene	ncRNA
unique_peak2-33216-7-15--1.20090916970181-0.947446088118041	chr10	117792951	117793515	+	0	NA	Intergenic	MERVL-int|LTR|ERVL	-61139	NM_054079	116849	Mm.213193	NM_054079	ENSMUSG00000090461	Iltifb	IL-22b|IL-TIFb|Il22b	interleukin 10-related T cell-derived inducible factor beta	protein-coding
common_peak2-27530-15-22--0.511397205501357-0.50761186003982	chr3	95855097	95855934	+	0	NA	intron (NM_013841, intron 3 of 14)	AT_rich|Low_complexity|Low_complexity	6863	NM_013841	22365	Mm.263185	NM_013841	ENSMUSG00000015747	Vps45	AI462172|AW554165|mVps45	vacuolar protein sorting 45 (yeast)	protein-coding
unique_peak2-34997-3-5--0.998945590680433-0.96108193396963	chr15	99594638	99594973	+	0	NA	intron (NM_028015, intron 1 of 9)	ORR1A4-int|LTR|MaLR	8141	NM_028015	71949	Mm.390821	NM_028015		Cers5	2310081H14Rik|AU045339|AW544927|Lass5|Trh4	ceramide synthase 5	protein-coding
unique_peak2-36945-2-8--2.08737925770563-1.65811743852845	chr3	105825431	105825783	+	0	NA	Intergenic	Intergenic	-8043	NM_001200028	100503311	Mm.386825	NM_029604	ENSMUSG00000010136	Pifo	1700027A23Rik	primary cilia formation	protein-coding
common_peak1-13550-63-55-0.630957669012986-1.88046737755849	chr2	4479521	4481618	+	0	NA	promoter-TSS (NM_001177844)	promoter-TSS (NM_001177844)	-231	NM_001177844	209630	Mm.37932	NM_172475	ENSMUSG00000026657	Frmd4a	2700017I06Rik|5330420J21|AI594879|C230040M21Rik|Frmd4|Gm13190|OTTMUSG00000010806|mKIAA1294	FERM domain containing 4A	protein-coding
unique_peak1-2332-6-2-0.980435609659146-1.26211192963361	chr15	83539916	83540434	+	0	NA	intron (NM_022723, intron 2 of 21)	intron (NM_022723, intron 2 of 21)	15294	NM_001271472	64706	Mm.40393	NM_022723	ENSMUSG00000016763	Scube1	7330410C13Rik|A630023E24Rik	signal peptide, CUB domain, EGF-like 1	protein-coding
common_peak1-14372-111-119-0.51080319580165-2.3367326302908	chr2	167776712	167778966	+	0	NA	intron (NM_011201, intron 1 of 8)	intron (NM_011201, intron 1 of 8)	20012	NM_011201	19246	Mm.277916	NM_011201	ENSMUSG00000027540	Ptpn1	PTP-1B|PTP-HA2|PTP1B	protein tyrosine phosphatase, non-receptor type 1	protein-coding
common_peak2-25566-14-9-0.577288065470282-0.630231561310125	chr19	6869381	6869774	+	0	NA	Intergenic	Intergenic	34857	NR_039555	100628576		NR_039555		Mir5046	mmu-mir-5046|mu-mir-5046	microRNA 5046	ncRNA
unique_peak1-4092-9-0-3.18961340640422-3.01029995663981	chr2	71811217	71811789	+	0	NA	Intergenic	Intergenic	-7769	NM_001204167	56508	Mm.196153	NM_019688	ENSMUSG00000049044	Rapgef4	1300003D15Rik|5730402K07Rik|6330581N18Rik|EPAC 2|Epac-2|Epac2|mKIAA4040	Rap guanine nucleotide exchange factor (GEF) 4	protein-coding
common_peak2-29605-15-9-0.690236655668294-0.732381977911291	chr6	52680073	52680505	+	0	NA	intron (NM_025816, intron 4 of 17)	intron (NM_025816, intron 4 of 17)	16566	NM_025816	52440	Mm.389757	NM_025816	ENSMUSG00000004535	Tax1bp1	1200003J11Rik|1700069J21Rik|AA930106|D6Ertd404e|D6Ertd772e|T6bp|TXBP151	Tax1 (human T cell leukemia virus type I) binding protein 1	protein-coding
common_peak1-10307-48-84--0.438463784902887-0.954705795061059	chr13	66932223	66933787	+	0	NA	Intergenic	Intergenic	73281	NM_026219	67530	Mm.379136	NM_026219	ENSMUSG00000021520	Uqcrb	2210415M14Rik|QP-C|QPC|UQBC|UQBP|UQPC	ubiquinol-cytochrome c reductase binding protein	protein-coding
unique_peak2-33160-10-18--0.891512168434816-0.804350088532826	chr10	91187458	91188133	+	0	NA	Intergenic	Intergenic	347135	NR_029812	723955		NR_029812	miRBase:MI0000715	Mir135a-2	Mirn135a-2	microRNA 135a-2	ncRNA
common_peak1-7998-11-9-0.186765489364251-0.344532117358383	chr1	163994689	163995303	+	0	NA	intron (NM_172646, intron 16 of 19)	L1Md_T|LINE|L1	59896	NR_040562	72753	Mm.452125	NR_040562	ENSMUSG00000090260	2810442N19Rik	-	RIKEN cDNA 2810442N19 gene	ncRNA
common_peak2-26194-30-24-0.525819219717149-0.825714541185123	chr2	25332010	25332582	+	0	NA	Intergenic	Intergenic	-7027	NM_008963	19215	Mm.1008	NM_008963	ENSMUSG00000015090	Ptgds	21kDa|L-PGDS|PGD2|PGDS|PGDS2|Ptgs3	prostaglandin D2 synthase (brain)	protein-coding
common_peak2-27658-31-35-0.0553136693708112-0.313095283157747	chr3	108553993	108554642	+	0	NA	intron (NM_177859, intron 1 of 11)	intron (NM_177859, intron 1 of 11)	11741	NM_177859	329738	Mm.72322	NM_177859	ENSMUSG00000049565	Aknad1	4921525H12Rik	AKNA domain containing 1	protein-coding
common_peak2-30660-15-29--0.894725845052863-1.1282783422172	chr7	100607583	100608742	+	0	NA	Intergenic	Intergenic	379773	NM_021427	58238	Mm.113787	NM_021427		Fam181b	A830059I20Rik|AB041569	family with sequence similarity 181, member B	protein-coding
unique_peak2-38015-1-6--2.43441193227435-1.56314192529759	chr6	31204276	31204601	+	0	NA	intron (NR_040257, intron 2 of 7)	intron (NR_040257, intron 2 of 7)	34087	NR_040261	73652	Mm.441297	NR_040257	ENSMUSG00000087380	2210408F21Rik	-	RIKEN cDNA 2210408F21 gene	ncRNA
common_peak2-24726-16-25--0.58217607587303-0.633951497070961	chr17	47368632	47369494	+	0	NA	intron (NM_172622, intron 1 of 16)	intron (NM_172622, intron 1 of 16)	1884	NM_172622	224829	Mm.260989	NM_172622	ENSMUSG00000064043	Trerf1	9430096I18Rik|AI429294|B830015H24|RAPA|Trep-132|Trep132	transcriptional regulating factor 1	protein-coding
unique_peak1-93-14-4-1.57728806547028-2.4322161449009	chr1	45859840	45860582	+	0	NA	intron (NM_028599, intron 4 of 20)	intron (NM_028599, intron 4 of 20)	7865	NM_028599	73674	Mm.270376	NM_028599	ENSMUSG00000025995	Wdr75	1300003A18Rik|2410118I19Rik|C77608	WD repeat domain 75	protein-coding
unique_peak2-36121-12-15--0.351224014912361-0.332077462497413	chr2	5174889	5175571	+	0	NA	Intergenic	L1_Mus4|LINE|L1	116408	NM_028804	74186	Mm.274715	NM_028804	ENSMUSG00000026676	Ccdc3	2310045O21Rik	coiled-coil domain containing 3	protein-coding
common_peak1-14879-13-19--0.543456064249594-0.466170754204149	chr3	95855354	95855936	+	0	NA	intron (NM_013841, intron 3 of 14)	B1_Mus2|SINE|Alu	6733	NM_013841	22365	Mm.263185	NM_013841	ENSMUSG00000015747	Vps45	AI462172|AW554165|mVps45	vacuolar protein sorting 45 (yeast)	protein-coding
common_peak2-22575-8-12--0.695217300193522-0.475924844171029	chr13	65278120	65278830	+	0	NA	TTS (NM_175290)	TTS (NM_175290)	24941	NM_146819	258816	Mm.377705	NM_146819	ENSMUSG00000049806	Olfr466	MOR209-1	olfactory receptor 466	protein-coding
unique_peak1-3814-15-4-1.69023665566829-1.97518968347063	chr2	27426377	27427095	+	0	NA	Intergenic	ORR1E|LTR|MaLR	56069	NM_080848	140858	Mm.28265	NM_080848	ENSMUSG00000026917	Wdr5	2410008O07Rik|AA408785|AA960360|Big|Big-3	WD repeat domain 5	protein-coding
common_peak2-30112-11-11--0.0762689164695427-0.301029995663976	chr6	135362186	135362797	+	0	NA	Intergenic	C-rich|Low_complexity|Low_complexity	44980	NM_001288627	13730	Mm.182785	NM_010128	ENSMUSG00000030208	Emp1	I-8-09|TMP	epithelial membrane protein 1	protein-coding
common_peak1-17799-14-12-0.198776442216552-0.373562084705529	chr7	99214948	99215703	+	0	NA	intron (NM_001243046, intron 2 of 14)	intron (NM_001243046, intron 2 of 14)	4421	NM_001243046	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
unique_peak2-35596-6-16--1.52206473087004-1.32521814697968	chr17	78723679	78724331	+	0	NA	intron (NM_015800, intron 7 of 16)	intron (NM_015800, intron 7 of 16)	93487	NM_001285949	225020	Mm.236835	NM_199448	ENSMUSG00000056121	Fez2	9030616F16|D17Ertd315e	fasciculation and elongation protein zeta 2 (zygin II)	protein-coding
unique_peak2-32581-1-8--2.79698201165906-2.05605744720049	chr1	89069603	89069988	+	0	NA	Intergenic	Intergenic	-10273	NM_027084	69453	Mm.84618	NM_027084	ENSMUSG00000036480	Prss56	1700027L20Rik	protease, serine 56	protein-coding
unique_peak1-3772-7-1-1.79909083029819-1.80617997398389	chr19	55532568	55532928	+	0	NA	intron (NM_016862, intron 5 of 7)	intron (NM_016862, intron 5 of 7)	142201	NM_001293686	53611	Mm.258637	NM_016862	ENSMUSG00000024983	Vti1a	1110014F16Rik|1110018K19Rik|4921537J05Rik|MVti1|MVti1a|Vti1|Vti1-rp2	vesicle transport through interaction with t-SNAREs 1A	protein-coding
unique_peak2-38525-8-10--0.454209200689727-1.078512453669	chr7	45682318	45682906	+	0	NA	Intergenic	Intergenic	837292	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak2-34635-4-7--1.02346051385325-1.09384600808989	chr14	99200624	99200948	+	0	NA	Intergenic	Intergenic	244569	NM_175245	76789	Mm.38912	NM_175245	ENSMUSG00000033186	Mzt1	2410129H14Rik|AI120158|Mozart1	mitotic spindle organizing protein 1	protein-coding
common_peak1-13471-39-32-0.5713671275607-1.08158034290997	chr2	103284682	103285715	+	0	NA	intron (NM_010125, intron 4 of 6)	intron (NM_010125, intron 4 of 6)	20973	NM_010125	13711	Mm.20888	NM_010125	ENSMUSG00000027186	Elf5	ESE-2|ESE-5|ESE-5.	E74-like factor 5	protein-coding
unique_peak1-364-9-0-3.18961340640422-3.01029995663981	chr1	141453249	141453815	+	0	NA	intron (NM_015780, intron 2 of 5)	intron (NM_015780, intron 2 of 5)	3267	NM_015780	50702	Mm.220362	NM_015780	ENSMUSG00000057037	Cfhr1	AI194696|CFHRB|Cfhl1	complement factor H-related 1	protein-coding
common_peak2-23360-8-14--0.901668177660948-0.660903317613906	chr15	44618489	44619052	+	0	NA	promoter-TSS (NR_040309)	promoter-TSS (NR_040309)	-539	NR_040309	69659	Mm.352401	NR_040309	ENSMUSG00000097102	2310069G16Rik	-	RIKEN cDNA 2310069G16 gene	ncRNA
common_peak2-28060-14-14--0.00767443525087419-0.308519316180257	chr4	59626156	59626787	+	0	NA	intron (NM_001301367, intron 11 of 11)	intron (NM_001301367, intron 11 of 11)	-12612	NM_001015681	230259	Mm.45688	NM_153158	ENSMUSG00000045071	E130308A19Rik	-	RIKEN cDNA E130308A19 gene	protein-coding
common_peak1-12613-45-102--0.826142501838347-2.96267322331898	chr18	31759208	31760616	+	0	NA	intron (NM_026165, intron 4 of 7)	intron (NM_026165, intron 4 of 7)	9644	NM_026165	67453	Mm.23896	NM_026165	ENSMUSG00000024259	Slc25a46	1200007B05Rik|AI325987	solute carrier family 25, member 46	protein-coding
unique_peak2-38789-4-5--0.608423014574403-0.909929411522249	chr7	128553816	128554201	+	0	NA	intron (NM_001081327, intron 1 of 1)	B3|SINE|B2	18198	NM_001081327	195646	Mm.247449	NM_177575	ENSMUSG00000046321	Hs3st2	6430516N12Rik|A830061E14Rik|AW491345	heparan sulfate (glucosamine) 3-O-sulfotransferase 2	protein-coding
common_peak2-28008-11-12--0.191746133889479-0.310474156842889	chr4	46304887	46305330	+	0	NA	Intergenic	Intergenic	-51958	NM_183298	110805	Mm.354634	NM_183298		Foxe1	Titf2	forkhead box E1	protein-coding
unique_peak2-33394-16-21--0.341167976369236-0.392630012299441	chr11	50674055	50675117	+	0	NA	intron (NM_173372, intron 9 of 10)	intron (NM_173372, intron 9 of 10)	10399	NM_173372	108072	Mm.134265	NM_173372	ENSMUSG00000000617	Grm6	BC021919|Gm3|Gprc1f|mGluR6|nerg1|nob2|nob3|nob4	glutamate receptor, metabotropic 6	protein-coding
unique_peak1-7339-8-1-2.00522241794757-2.05605744720049	chrX	36798291	36798775	+	0	NA	Intergenic	Intergenic	99090	NM_001177380	78631	Mm.243738	NM_001177380	ENSMUSG00000079619	Cypt15	1700085A12Rik	cysteine-rich perinuclear theca 15	protein-coding
common_peak2-23931-12-7-0.648775985087639-0.697979855752659	chr16	11193243	11193678	+	0	NA	3' UTR (NM_025546, exon 9 of 9)	3' UTR (NM_025546, exon 9 of 9)	9925	NM_025546	66409	Mm.28291	NM_025546	ENSMUSG00000005846	Rsl1d1	2410005K20Rik|C76439|pBK1	ribosomal L1 domain containing 1	protein-coding
unique_peak1-869-11-0-3.50869358425161-3.61235994796777	chr11	28831753	28832362	+	0	NA	Intergenic	MusHAL1|LINE|L1	78852	NM_146015	216616	Mm.44176	NM_146015	ENSMUSG00000020467	Efemp1	-	epidermal growth factor-containing fibulin-like extracellular matrix protein 1	protein-coding
common_peak2-22425-7-7--0.200909169701811-0.97990265578305	chr13	37751765	37752155	+	0	NA	Intergenic	(GGA)n|Simple_repeat|Simple_repeat	-165947	NM_026830	68750	Mm.491109	NM_026830	ENSMUSG00000039087	Rreb1	1110037N09Rik|AA414966|B930013M22Rik	ras responsive element binding protein 1	protein-coding
common_peak1-12961-44-38-0.536490615706287-1.13178052607246	chr19	58522205	58524304	+	0	NA	intron (NR_104342, intron 4 of 11)	intron (NR_104342, intron 4 of 11)	5830	NM_001285457	14585	Mm.88367	NM_010279	ENSMUSG00000025089	Gfra1	AU042498	glial cell line derived neurotrophic factor family receptor alpha 1	protein-coding
unique_peak2-36033-13-11-0.193509529916613-0.379391706698377	chr19	43524746	43525305	+	0	NA	intron (NM_031396, intron 1 of 10)	intron (NM_031396, intron 1 of 10)	10099	NM_031396	83674	Mm.329864	NM_031396	ENSMUSG00000025189	Cnnm1	AI846314|Acdp1|CLP-1	cyclin M1	protein-coding
common_peak2-23080-25-36--0.347603460283844-0.465043498729215	chr14	75844161	75845190	+	0	NA	Intergenic	Intergenic	-11114	NM_001128093	380918	Mm.484360	NM_001128093	ENSMUSG00000091722	Siah3	Gm912	seven in absentia homolog 3 (Drosophila)	protein-coding
common_peak2-23802-36-58--0.403321963194087-0.65827215096213	chr15	99972650	99974025	+	0	NA	intron (NM_001159361, intron 4 of 37)	(A)n|Simple_repeat|Simple_repeat	-11490	NM_172819	239667	Mm.243658	NM_172819	ENSMUSG00000023026	Dip2b	4932422C22|AI317237|AI854602|mKIAA1463	DIP2 disco-interacting protein 2 homolog B (Drosophila)	protein-coding
common_peak2-28004-11-6-0.701338662194009-1.32595962126035	chr4	45966654	45967103	+	0	NA	Intergenic	MLT1A0|LTR|MaLR	-11329	NM_001290475	100121	Mm.275413	NM_146142	ENSMUSG00000035517	Tdrd7	5730495N10Rik|AI447470|PCTAIRE2BP	tudor domain containing 7	protein-coding
common_peak2-30795-9-5-0.604650905683064-1.21398586181642	chr7	127346374	127346704	+	0	NA	promoter-TSS (NM_026458)	promoter-TSS (NM_026458)	-939	NM_026458	67928	Mm.158178	NM_026458	ENSMUSG00000062017	Abca14	1700110B15Rik|4930539G24Rik	ATP-binding cassette, sub-family A (ABC1), member 14	protein-coding
unique_peak1-7005-10-2-1.77145284428761-2.09384600808989	chr8	122587087	122587598	+	0	NA	Intergenic	Intergenic	38030	NM_133967	102193	Mm.240076	NM_133967	ENSMUSG00000031823	Zdhhc7	AL024087|Gramp2	zinc finger, DHHC domain containing 7	protein-coding
common_peak2-21370-9-12--0.510826311736872-0.394412252720706	chr11	78367534	78368059	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-3559	NM_133706	69071	Mm.29431	NM_133706	ENSMUSG00000037278	Tmem97	1810014L12Rik|AI115531|AL022956|D11Bhm182e	transmembrane protein 97	protein-coding
common_peak2-31703-11-6-0.701338662194009-1.32595962126035	chr9	67485399	67485699	+	0	NA	Intergenic	Intergenic	-78039	NM_001081242	70549	Mm.33645	NM_027458	ENSMUSG00000052698	Tln2	5730421P04Rik|AI507121|AI787438|AL118320|mKIAA0320	talin 2	protein-coding
unique_peak2-36783-4-10--1.48289213249054-1.5150158574804	chr3	79193123	79193551	+	0	NA	intron (NM_001142953, intron 1 of 4)	intron (NM_001142953, intron 1 of 4)	44039	NM_001142953	100233207	Mm.373801	NM_001142953	ENSMUSG00000091685	Gm17359	-	predicted gene, 17359	protein-coding
common_peak1-11374-42-30-0.788133017480309-1.81099027427053	chr15	96002949	96004534	+	0	NA	Intergenic	Intergenic	-9490	NR_028311	100043335	Mm.247464	NR_028311		Gm4371	EG667874|Gm8854	eukaryotic translation initiation factor 3, subunit I pseudogene	pseudo
common_peak1-8097-41-16-1.61368586359832-4.65855722829497	chr1	181034913	181036360	+	0	NA	intron (NM_027188, intron 5 of 11)	intron (NM_027188, intron 5 of 11)	412498	NM_027188	69726	Mm.222338	NM_027188		Smyd3	2410008A19Rik|Zmynd1	SET and MYND domain containing 3	protein-coding
common_peak1-13335-38-45-0.0478907032415172-0.322047890816902	chr19	43752578	43753662	+	0	NA	Intergenic	L1MB5|LINE|L1	3452	NR_045645	100502982	Mm.313570	NR_045645		BC037704	-	cDNA sequence BC037704	ncRNA
common_peak2-30571-8-6-0.197867495889966-1.03789460276074	chr7	79920487	79920965	+	0	NA	Intergenic	Intergenic	326228	NR_046024	625243	Mm.261798	NR_046024		Gm6567	-	predicted gene 6567	ncRNA
unique_peak2-32626-5-11--1.28934283672701-1.477227296591	chr1	120135735	120136308	+	0	NA	Intergenic	L1Md_F2|LINE|L1	71688	NM_011650	22099	Mm.426637	NM_011650	ENSMUSG00000026374	Tsn	2610034C24Rik|AU040286|C3PO|TB-RBP	translin	protein-coding
common_peak1-11797-67-91-0.0208495267259821-0.3057506808173	chr16	56028789	56030425	+	0	NA	intron (NM_001024622, intron 1 of 4)	CpG	223	NM_001024622	76302	Mm.310642	NM_001024622	ENSMUSG00000071533	Pcnp	1110018D06Rik|AI647035	PEST proteolytic signal containing nuclear protein	protein-coding
unique_peak1-227-10-2-1.77145284428761-2.09384600808989	chr1	88663081	88663677	+	0	NA	intron (NM_153530, intron 5 of 20)	intron (NM_153530, intron 5 of 20)	63000	NM_001172157	208718	Mm.389152	NM_153530	ENSMUSG00000053333	Dis3l2	4930429A22Rik|8030493P09Rik	DIS3 mitotic control homolog (S. cerevisiae)-like 2	protein-coding
common_peak2-24847-22-11-1.06232160436625-1.51503956548638	chr17	75110584	75111190	+	0	NA	Intergenic	B3A|SINE|B2	-6203	NM_152817	74196	Mm.209503	NM_152817	ENSMUSG00000024078	Ttc27	2610511O17Rik	tetratricopeptide repeat domain 27	protein-coding
common_peak2-30162-32-31-0.27909201921966-0.499999074040591	chr6	147090950	147092121	+	0	NA	Intergenic	Intergenic	-37228	NR_033640	100039641	Mm.170402	NR_033640	ENSMUSG00000085600	E330012B07Rik	Gm15768|OTTMUSG00000026071	RIKEN cDNA E330012B07 gene	ncRNA
unique_peak1-1634-9-5-0.604650905683064-1.21398586181642	chr13	48978530	48978979	+	0	NA	intron (NM_001033268, intron 17 of 17)	intron (NM_001033268, intron 17 of 17)	-12500	NM_011078	18676	Mm.486213	NM_011078	ENSMUSG00000038025	Phf2	GRC5	PHD finger protein 2	protein-coding
common_peak2-32369-3-5--0.998945590680433-0.96108193396963	chrX	103556027	103556350	+	0	NA	Intergenic	Intergenic	51023	NR_105803	102465963		NR_105803	miRBase:MI0021913	Mir6382	mmu-mir-6382	microRNA mir-6382	ncRNA
common_peak2-29413-35-45--0.092191697594509-0.310901174692144	chr6	145211088	145211911	+	0	NA	Intergenic	Intergenic	12427	NR_045598	100039495	Mm.121014	NR_045598	ENSMUSG00000086013	Gm15706	OTTMUSG00000025463	predicted gene 15706	ncRNA
unique_peak1-7001-9-6-0.382258484346616-1.11707584880836	chr8	122526784	122527245	+	0	NA	intron (NM_030209, intron 1 of 14)	intron (NM_030209, intron 1 of 14)	10644	NM_030209	78892	Mm.264680	NM_030209	ENSMUSG00000031825	Crispld2	1810049K24Rik|Lcrisp2|Lgl1|coffeecrisp	cysteine-rich secretory protein LCCL domain containing 2	protein-coding
common_peak1-13791-48-27-1.16357222917721-3.51718000375138	chr2	38823454	38825421	+	0	NA	Intergenic	L1_Rod|LINE|L1	-29392	NM_029687	76646	Mm.358777	NM_029687	ENSMUSG00000035295	Wdr38	1700123D08Rik	WD repeat domain 38	protein-coding
common_peak2-21424-22-63--1.3527158949126-3.98414929725606	chr11	84870131	84871392	+	0	NA	intron (NM_001029934, intron 6 of 33)	(TC)n|Simple_repeat|Simple_repeat	82696	NM_001029934	237898	Mm.178524	NM_001029934	ENSMUSG00000000804	Usp32	2900074J03Rik|6430526O11Rik|AW045245	ubiquitin specific peptidase 32	protein-coding
unique_peak1-3503-14-4-1.57728806547028-2.4322161449009	chr19	15516797	15517516	+	0	NA	Intergenic	Lx7|LINE|L1	481956	NM_001205339	107272	Mm.289936	NM_177420	ENSMUSG00000024640	Psat1	D8Ertd814e|EPIP|PSA|Psat	phosphoserine aminotransferase 1	protein-coding
unique_peak2-38887-7-9--0.522837264589173-1.05908390183068	chr8	4569326	4569773	+	0	NA	Intergenic	RLTR22_Mur|LTR|ERVK	-43621	NM_145591	233987	Mm.102799	NM_145591		Zfp958	-	zinc finger protein 958	protein-coding
common_peak1-18198-21-25--0.130950452874856-0.305461879681376	chr8	22652892	22653662	+	0	NA	Intergenic	L1_Mus2|LINE|L1	13775	NM_001177521	100041890	Mm.423382	NM_001177521	ENSMUSG00000094818	Gm15308	ENSMUSG00000065957|OTTMUSG00000019860	predicted gene 15308	protein-coding
common_peak2-23395-28-24-0.409102930046738-0.610902792227729	chr15	58823768	58824426	+	0	NA	intron (NM_001146180, intron 3 of 13)	intron (NM_001146180, intron 3 of 13)	58732	NM_023172	66218	Mm.322294	NM_023172	ENSMUSG00000022354	Ndufb9	1190008J14Rik	NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 9	protein-coding
unique_peak2-36040-2-8--2.08737925770563-1.65811743852845	chr19	44297707	44298095	+	0	NA	intron (NM_024450, intron 2 of 5)	MERVL-int|LTR|ERVL	20123	NM_024450	30049	Mm.480594	NM_024450	ENSMUSG00000025202	Scd3	4930513N16Rik	stearoyl-coenzyme A desaturase 3	protein-coding
unique_peak2-36494-10-5-0.771452844287613-1.33892459842472	chr2	154389815	154390224	+	0	NA	intron (NM_007891, intron 2 of 6)	intron (NM_007891, intron 2 of 6)	5143	NM_001291105	13555	Mm.18036	NM_007891	ENSMUSG00000027490	E2f1	E2F-1|mKIAA4009	E2F transcription factor 1	protein-coding
unique_peak1-743-15-5-1.4272022498345-1.61682445937017	chr10	111539564	111540308	+	0	NA	intron (NM_026223, intron 4 of 5)	L4|LINE|RTE	19526	NM_026223	67537	Mm.292351	NM_026223	ENSMUSG00000020214	Glipr1l2	4921508O11Rik	GLI pathogenesis-related 1 like 2	protein-coding
common_peak2-27816-7-7--0.200909169701811-0.97990265578305	chr3	145102762	145103161	+	0	NA	intron (NM_027770, intron 28 of 59)	intron (NM_027770, intron 28 of 59)	-136211	NM_001081094	229937	Mm.24586	NM_001081094	ENSMUSG00000074182	Znhit6	2410019A14Rik	zinc finger, HIT type 6	protein-coding
unique_peak2-36262-1-5--2.2120195109379-1.32905871926422	chr2	59395985	59396337	+	0	NA	Intergenic	ID_B1|SINE|B4	-53938	NM_198294	66860	Mm.27917	NM_198294	ENSMUSG00000035168	Tanc1	1200003E16Rik|Tanc|mKIAA1728	tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1	protein-coding
unique_peak1-4493-24-7-1.79320990276772-3.23080944932562	chr3	4687804	4688695	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	-110459	NR_045272	100503859	Mm.75172	NR_045272	ENSMUSG00000098659	1110015O18Rik	-	RIKEN cDNA 1110015O18 gene	ncRNA
common_peak1-14124-69-85-0.168877692556634-0.472963502765614	chr2	129800393	129802159	+	0	NA	Intergenic	Lx9|LINE|L1	-36800	NM_009374	21818	Mm.2961	NM_009374	ENSMUSG00000027401	Tgm3	AI893889|TG E|TG(E)|TGE|TGase E|TGase-3	transglutaminase 3, E polypeptide	protein-coding
unique_peak2-33119-3-20--2.80630051273804-3.35694334496952	chr10	81377790	81378400	+	0	NA	intron (NM_199062, intron 1 of 3).2	L1_Mur2|LINE|L1	15130	NM_199062	331188	Mm.351497	NM_199062		Zfp781	A130081B01	zinc finger protein 781	protein-coding
common_peak1-14466-41-74--0.52766998564722-1.1394418936145	chr3	90537247	90538653	+	0	NA	intron (NM_207263, intron 5 of 7)	RMER15|LTR|ERVL	7122	NM_207263	384997	Mm.316644	NM_207263	ENSMUSG00000042250	Pglyrp4	Gm1478|Gm413	peptidoglycan recognition protein 4	protein-coding
common_peak2-24173-25-22-0.338287949288093-0.51032171069054	chr16	45944774	45945555	+	0	NA	Intergenic	Intergenic	65362	NM_001134480	433022	Mm.380993	NM_001134480	ENSMUSG00000087141	Plcxd2	AW494639|EG433022	phosphatidylinositol-specific phospholipase C, X domain containing 2	protein-coding
unique_peak2-39681-6-12--1.13504160776079-1.45089835786865	chr9	108692224	108692749	+	0	NA	Intergenic	PB1D9|SINE|Alu	-5839	NM_029634	76500	Mm.276336	NM_029634	ENSMUSG00000032599	Ip6k2	1500005N04Rik|AW050208|Ihpk2	inositol hexaphosphate kinase 2	protein-coding
unique_peak1-4332-7-3-0.799090830298189-1.23214870625617	chr2	152788515	152789016	+	0	NA	intron (NM_001083618, intron 1 of 14)	intron (NM_001083618, intron 1 of 14)	544	NM_001083618	74711	Mm.44746	NM_029064	ENSMUSG00000074673	Ttll9	1700016F23Rik|4930509O20Rik|AW046572	tubulin tyrosine ligase-like family, member 9	protein-coding
unique_peak2-32836-3-8--1.58390809140159-1.39487600375387	chr1	191937026	191937434	+	0	NA	Intergenic	Intergenic	57329	NM_008937	19130	Mm.132579	NM_008937	ENSMUSG00000010175	Prox1	A230003G05Rik	prospero homeobox 1	protein-coding
common_peak2-27405-8-8--0.164702583494742-1.00793137938329	chr3	88455384	88455961	+	0	NA	TTS (NM_181817)	TTS (NM_181817)	1392	NM_181817	242093	Mm.269130	NM_181817	ENSMUSG00000049741	Rxfp4	GPCR142|Gpr100|Rln3r2|SALPR	relaxin family peptide receptor 4	protein-coding
unique_peak2-38926-1-6--2.43441193227435-1.56314192529759	chr8	22486198	22486617	+	0	NA	Intergenic	ORR1A2|LTR|MaLR	-19708	NM_007844	13218	Mm.304264	NM_007844	ENSMUSG00000074437	Defa-rs1	2010300L12Rik|2010319H24Rik|CRS1C|CRS1C-2|CRS1C-5|Defcr-rs1	defensin, alpha, related sequence 1	protein-coding
common_peak1-7579-61-82-0.00770989840241576-0.302346047605302	chr1	52499557	52500969	+	0	NA	Intergenic	Intergenic	57029	NM_008667	17936	Mm.25903	NM_008667	ENSMUSG00000002881	Nab1	-	Ngfi-A binding protein 1	protein-coding
common_peak2-26520-28-38--0.232443099040786-0.377553616161376	chr2	91053919	91054981	+	0	NA	TTS (NM_007387)	TTS (NM_007387)	11381	NM_007387	11432	Mm.45570	NM_007387	ENSMUSG00000002103	Acp2	Acp-2|LAP	acid phosphatase 2, lysosomal	protein-coding
unique_peak2-35108-10-7-0.356415345008769-1.12966497611638	chr16	23158926	23159427	+	0	NA	Intergenic	RMER17A2|LTR|ERVK	12567	NM_009605	11450	Mm.3969	NM_009605	ENSMUSG00000022878	Adipoq	30kDa|APN|Acdc|Acrp30|GBP28|adipo|apM1	adiponectin, C1Q and collagen domain containing	protein-coding
common_peak1-11659-25-20-0.469532482566345-0.662033714151238	chr16	24447571	24448839	+	0	NA	promoter-TSS (NM_001145952)	promoter-TSS (NM_001145952)	28	NM_001145952	210126	Mm.209385	NM_178665	ENSMUSG00000033306	Lpp	9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16	LIM domain containing preferred translocation partner in lipoma	protein-coding
common_peak1-16282-12-26--1.10611151707583-1.26025077975594	chr5	110770180	110770624	+	0	NA	intron (NM_001164833, intron 7 of 11)	intron (NM_001164833, intron 7 of 11)	1652	NM_001164834	231602	Mm.55948	NM_153400	ENSMUSG00000029503	P2rx2	P2X2a|P2x2	purinergic receptor P2X, ligand-gated ion channel, 2	protein-coding
common_peak2-27557-35-54--0.349989455062156-0.572487971606931	chr3	96629710	96630639	+	0	NA	intron (NM_001163497, intron 1 of 3)	intron (NM_001163497, intron 1 of 3)	3100	NM_001163497	54215	Mm.34693	NM_018767	ENSMUSG00000038304	Cd160	AU045688|By55	CD160 antigen	protein-coding
unique_peak1-2129-8-2-1.42025991722641-1.65811743852845	chr15	53391703	53392050	+	0	NA	intron (NM_177225, intron 4 of 4)	intron (NM_177225, intron 4 of 4)	-214138	NM_010162	14042	Mm.309395	NM_010162		Ext1	AA409028	exostoses (multiple) 1	protein-coding
unique_peak2-34898-2-5--1.50241675698448-1.08602067057793	chr15	81857853	81858123	+	0	NA	intron (NM_010247, intron 7 of 12)	B3|SINE|B2	11189	NM_010247	14375	Mm.288809	NM_010247	ENSMUSG00000022471	Xrcc6	70kDa|G22p1|Ku70	X-ray repair complementing defective repair in Chinese hamster cells 6	protein-coding
unique_peak2-35885-12-10-0.189344366450341-0.386243247519795	chr18	84399948	84400488	+	0	NA	intron (NM_001033341, intron 8 of 8)	intron (NM_001033341, intron 8 of 8)	142668	NM_146090	225791	Mm.147052	NM_146090	ENSMUSG00000049090	Zadh2	C530046K17Rik|Pthr3	zinc binding alcohol dehydrogenase, domain containing 2	protein-coding
common_peak1-9232-11-14--0.398197011356905-0.379391706698377	chr11	84879615	84880159	+	0	NA	intron (NM_001029934, intron 5 of 33)	IAPEz-int|LTR|ERVK	73570	NM_001029934	237898	Mm.178524	NM_001029934	ENSMUSG00000000804	Usp32	2900074J03Rik|6430526O11Rik|AW045245	ubiquitin specific peptidase 32	protein-coding
unique_peak2-36487-5-4--0.0263084308932156-0.909929411522249	chr2	152739386	152739709	+	0	NA	intron (NM_001081044, intron 3 of 11)	intron (NM_001081044, intron 3 of 11)	2459	NM_001081044	228785	Mm.250604	NM_001081044	ENSMUSG00000027470	Mylk2	9830004H17Rik|BB138278	myosin, light polypeptide kinase 2, skeletal muscle	protein-coding
unique_peak1-83-10-4-1.03448725012141-1.5150158574804	chr1	40842052	40842589	+	0	NA	intron (NM_172499, intron 3 of 5)	intron (NM_172499, intron 3 of 5)	5182	NM_172499	211798	Mm.235443	NM_172499	ENSMUSG00000041945	Mfsd9	4931419K03Rik	major facilitator superfamily domain containing 9	protein-coding
unique_peak2-38107-4-9--1.34538860874061-1.36011389749466	chr6	71978727	71979247	+	0	NA	intron (NR_046180, intron 1 of 2)	MTEb|LTR|MaLR	13535	NR_046180	330350	Mm.246787	NR_046180		9130221F21Rik	9130221F21	RIKEN cDNA 9130221F21 gene	ncRNA
unique_peak2-39853-1-6--2.43441193227435-1.56314192529759	chrX	70477278	70477542	+	0	NA	Intergenic	RLTR18|LTR|ERVK	3765	NM_007978	14070	Mm.165807	NM_007978	ENSMUSG00000078317	F8a	AI852759|DXUcsf1|F8a1	factor 8-associated gene A	protein-coding
unique_peak1-1978-9-3-1.18961340640422-1.57096726280955	chr14	121371265	121371796	+	0	NA	Intergenic	B3|SINE|B2	61114	NM_023579	70572	Mm.221452	NM_023579	ENSMUSG00000030662	Ipo5	1110011C18Rik|5730478E03Rik|AA409333|C76941|IMB3|Kpnb3|Ranbp5	importin 5	protein-coding
common_peak2-30324-15-19--0.309763344331706-0.356936432242222	chr7	24902631	24903369	+	0	NA	intron (NM_021307, intron 1 of 4)	intron (NM_021307, intron 1 of 4)	5661	NM_021307	57745	Mm.82678	NM_021307	ENSMUSG00000052675	Zfp112	Znf112|Znf228	zinc finger protein 112	protein-coding
unique_peak1-1674-13-3-1.77847203063777-2.58603100924543	chr13	69594912	69595566	+	0	NA	Intergenic	URR1B|DNA|MER1_type	77503	NM_198600	210106	Mm.315959	NM_198600	ENSMUSG00000034575	Papd7	LAK-1|POLK|Pols|TRF4|TRF4-1	PAP associated domain containing 7	protein-coding
unique_peak2-32508-6-7--0.434601889619698-0.97990265578305	chr1	52113251	52113675	+	0	NA	intron (NM_011487, intron 3 of 23)	intron (NM_011487, intron 3 of 23)	48375	NM_011487	20849	Mm.1550	NM_011487	ENSMUSG00000062939	Stat4	-	signal transducer and activator of transcription 4	protein-coding
common_peak2-30005-53-112--0.679205949999259-2.31273107961856	chr6	124755697	124757672	+	0	NA	Intergenic	Intergenic	-2275	NM_013539	14794	Mm.261906	NM_013539	ENSMUSG00000038451	Spsb2	AI461677|C9|Grcc9|SSB2	splA/ryanodine receptor domain and SOCS box containing 2	protein-coding
common_peak2-23145-17-20--0.174021084573723-0.306598483909156	chr14	105894921	105895543	+	0	NA	Intergenic	Intergenic	-2773	NR_045921	74864	Mm.159344	NR_045921	ENSMUSG00000022116	4930449E01Rik	-	RIKEN cDNA 4930449E01 gene	ncRNA
common_peak1-10591-15-14-0.105274154947137-0.330004445983672	chr14	30825360	30826036	+	0	NA	intron (NM_001136240, intron 1 of 7)	intron (NM_001136240, intron 1 of 7)	3512	NM_001136240	218865	Mm.259916	NM_172264	ENSMUSG00000015970	Chdh	AU041472|D630034H06Rik	choline dehydrogenase	protein-coding
unique_peak2-37540-7-9--0.522837264589173-1.05908390183068	chr5	30072890	30073389	+	0	NA	intron (NM_001037940, intron 1 of 9)	intron (NM_001037940, intron 1 of 9)	-10663	NR_028426	332993	Mm.473746	NR_028426		Gm5129	EG332993|ENSMUSG00000053121	predicted gene 5129	ncRNA
common_peak1-10893-45-72--0.329466533535146-0.629057001794454	chr15	95370148	95371597	+	0	NA	Intergenic	Charlie10|DNA|MER1_type	-12189	NM_001289653	54003	Mm.3959	NM_016743	ENSMUSG00000022454	Nell2	A330108N19Rik|R75516|mel91	NEL-like 2	protein-coding
common_peak2-24701-11-8-0.338768582809301-1.14218153353838	chr17	45595149	45595707	+	0	NA	intron (NM_027649, intron 3 of 7)	intron (NM_027649, intron 3 of 7)	16459	NM_027649	71020	Mm.44257	NM_027649	ENSMUSG00000023935	Spats1	1700011H05Rik|4933400B06Rik|Daip2|Ddip|Srsp1	spermatogenesis associated, serine-rich 1	protein-coding
unique_peak2-36387-10-10--0.103016273628528-0.301029995663987	chr2	120404249	120404725	+	0	NA	intron (NM_001177792, intron 1 of 8)	intron (NM_001177792, intron 1 of 8)	11080	NM_009222	20619	Mm.245715	NM_009222	ENSMUSG00000027287	Snap23	23kDa|AA408749|SNAP-23|Sndt|Syndet	synaptosomal-associated protein 23	protein-coding
common_peak1-8489-17-30--0.735899972181837-0.841847921495509	chr10	80797376	80798387	+	0	NA	TTS (NM_001277265)	TTS (NM_001277265)	6433	NM_001277265	21390	Mm.4545	NM_009325	ENSMUSG00000034881	Tbxa2r	TP|TXA2-R	thromboxane A2 receptor	protein-coding
common_peak2-27669-16-21--0.341167976369236-0.392630012299441	chr3	109340379	109341149	+	0	NA	intron (NM_020505, intron 15 of 26)	intron (NM_020505, intron 15 of 26)	-36161	NM_146139	57257	Mm.282257	NM_020505	ENSMUSG00000033721	Vav3	A530094I06Rik|AA986410|Idd18.1	vav 3 oncogene	protein-coding
unique_peak2-37955-7-6--0.00826409175941478-0.97990265578305	chr5	151192075	151192491	+	0	NA	intron (NM_172887, intron 19 of 60)	Lx9|LINE|L1	112511	NR_024513	194292	Mm.300184	NR_024513		Gm5	Gm1812	predicted gene 5	ncRNA
common_peak2-30050-17-30--0.735899972181837-0.841847921495509	chr6	128102310	128103197	+	0	NA	Intergenic	PB1D9|SINE|Alu	-9157	NM_175414	109246	Mm.21814	NM_175414	ENSMUSG00000030352	Tspan9	6720474K14Rik|9430079M16Rik|AU018597	tetraspanin 9	protein-coding
unique_peak1-5417-8-3-1.00522241794757-1.39487600375387	chr5	111124848	111125342	+	0	NA	intron (NM_173066, intron 23 of 50)	ID4|SINE|ID	-29935	NR_105993	102466216		NR_105993		Mir7026	mmu-mir-7026	microRNA mir-7026	ncRNA
unique_peak2-33279-8-20--1.38709500483119-1.45476480588849	chr11	116522089	116523217	+	0	NA	intron (NM_001163318, intron 4 of 4)	intron (NM_001163318, intron 4 of 4)	4231	NM_001163318	100038570	Mm.390349	NM_001163318	ENSMUSG00000075410	Gm11744	OTTMUSG00000003947|Prcd	predicted gene 11744	protein-coding
common_peak2-24619-12-11-0.0638134843664826-0.337263207250336	chr17	33955820	33956288	+	0	NA	exon (NM_030697, exon 6 of 11)	exon (NM_030697, exon 6 of 11)	5389	NM_016844	54127	Mm.352374	NM_016844	ENSMUSG00000067288	Rps28	-	ribosomal protein S28	protein-coding
unique_peak1-5045-10-2-1.77145284428761-2.09384600808989	chr4	134107926	134108448	+	0	NA	promoter-TSS (NM_029100)	promoter-TSS (NM_029100)	-106	NM_029100	74777	Mm.29773	NM_029100	ENSMUSG00000050989	Sepn1	1110019I12Rik|AI414492	selenoprotein N, 1	protein-coding
common_peak1-9514-25-17-0.691924903902794-0.98872314135509	chr11	115403164	115404324	+	0	NA	Intergenic	B1F|SINE|Alu	-6200	NM_133354	170930	Mm.29923	NM_133354	ENSMUSG00000020738	Sumo2	SUMO-2|Smt3A|Smt3b|Smt3h2	SMT3 suppressor of mif two 3 homolog 2 (yeast)	protein-coding
common_peak2-31784-18-19--0.00900894365901106-0.306598483909153	chr9	30426918	30427548	+	0	NA	Intergenic	Intergenic	192319	NM_028874	102607	Mm.35084	NM_028874	ENSMUSG00000031993	Snx19	3526401K03Rik|AI195321|AI848208|mKIAA0254	sorting nexin 19	protein-coding
unique_peak1-976-11-2-1.92373108353046-2.32232533660526	chr11	63264515	63265148	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	319819	NM_008885	18858	Mm.1237	NM_008885	ENSMUSG00000018217	Pmp22	22kDa|Gas-3|HNPP|Tr|trembler	peripheral myelin protein 22	protein-coding
unique_peak2-38692-3-5--0.998945590680433-0.96108193396963	chr7	102222910	102223260	+	0	NA	Intergenic	L1Md_A|LINE|L1	-1136062	NM_011858	23966	Mm.254610	NM_011858	ENSMUSG00000048078	Tenm4	Doc4|ELM2|Odz4|R75022|Ten-m4|l(7)-3Rn|l7Rn3|mKIAA1302	teneurin transmembrane protein 4	protein-coding
unique_peak2-39520-8-8--0.164702583494742-1.00793137938329	chr9	65408508	65408908	+	0	NA	intron (NM_153119, intron 3 of 5)	intron (NM_153119, intron 3 of 5)	19186	NM_153119	102595	Mm.247303	NM_153119		Plekho2	AI840980|Plekhq1	pleckstrin homology domain containing, family O member 2	protein-coding
common_peak2-21654-37-32-0.481598952127365-0.849650211186447	chr11	102555438	102556324	+	0	NA	intron (NM_025918, intron 1 of 4)	intron (NM_025918, intron 1 of 4)	3158	NM_025918	52715	Mm.277638	NM_025918	ENSMUSG00000020925	Ccdc43	2610001E01Rik|D11Ertd707e	coiled-coil domain containing 43	protein-coding
common_peak2-30245-11-23--1.07626891646954-1.24082643394777	chr7	5062083	5062596	+	0	NA	exon (NM_001145013, exon 3 of 3)	exon (NM_001145013, exon 3 of 3)	6174	NM_001145013	192658	Mm.28764	NM_138954	ENSMUSG00000035191	Rfpl4	D7Ertd486e|Rfpl4a	ret finger protein-like 4	protein-coding
unique_peak2-39966-7-14--1.10779976531033-0.817533494790411	chrX	142681903	142682564	+	0	NA	Intergenic	MLT1B|LTR|MaLR	-714823	NM_008312	15560	Mm.439670	NM_008312	ENSMUSG00000041380	Htr2c	5-HT2C|5-HT2cR|5-HTR2C|5HT1c|Htr1c|SR1	5-hydroxytryptamine (serotonin) receptor 2C	protein-coding
common_peak1-12349-7-8--0.370834171144123-1.00793137938329	chr17	56269552	56269990	+	0	NA	intron (NM_013662, intron 7 of 16)	(CAA)n|Simple_repeat|Simple_repeat	3504	NM_013662	20359	Mm.8029	NM_013662	ENSMUSG00000001227	Sema6b	Sema|Seman|VIb|semaZ	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6B	protein-coding
unique_peak2-38250-15-42--1.41410000414644-2.92433603673115	chr6	124804863	124806117	+	0	NA	intron (NM_013534, intron 2 of 14)	B2_Mm2|SINE|B2	2215	NM_013534	14789	Mm.35708	NM_013534	ENSMUSG00000023191	Leprel2	BC016431|Grcb|P3h3	leprecan-like 2	protein-coding
common_peak2-26271-120-112-0.732782658076562-4.52774647959176	chr2	30707300	30710036	+	0	NA	intron (NM_009116, intron 1 of 3)	intron (NM_009116, intron 1 of 3)	7781	NM_009116	20204	Mm.1802	NM_009116	ENSMUSG00000039476	Prrx2	Prx2|S8	paired related homeobox 2	protein-coding
unique_peak1-451-12-4-1.32684789020028-2.04196296489515	chr1	166652512	166653126	+	0	NA	Intergenic	Intergenic	-74044	NM_019759	56429	Mm.28935	NM_019759	ENSMUSG00000026574	Dpt	1810032B19Rik|5033416F05Rik|EQ-1|Eq1	dermatopontin	protein-coding
common_peak1-16764-78-66-0.740731903702763-2.91192709769315	chr6	34862020	34863634	+	0	NA	Intergenic	Intergenic	-1996	NM_001013366	101240	Mm.152120	NM_001013366	ENSMUSG00000058486	Wdr91	9530020G05Rik|AI987683|AU018665	WD repeat domain 91	protein-coding
common_peak2-27363-7-7--0.200909169701811-0.97990265578305	chr3	83993650	83994063	+	0	NA	intron (NM_030706, intron 6 of 11)	intron (NM_030706, intron 6 of 11)	15296	NR_036654	624713	Mm.442604	NR_036654		Gm6525	EG624713	ribosomal protein L36a pseudogene	pseudo
common_peak1-7619-16-43--1.34116797636924-2.83052996583712	chr1	60566206	60566806	+	0	NA	intron (NM_001045513, intron 4 of 13)	intron (NM_001045513, intron 4 of 13)	57103	NM_001045513	77300	Mm.440325	NM_001045513	ENSMUSG00000026014	Raph1	9430025M21Rik|C730009O10Rik|Lpd	Ras association (RalGDS/AF-6) and pleckstrin homology domains 1	protein-coding
unique_peak1-1414-7-3-0.799090830298189-1.23214870625617	chr12	79610843	79611281	+	0	NA	intron (NM_145965, intron 9 of 22)	intron (NM_145965, intron 9 of 22)	-181460	NM_027597	70897	Mm.56514	NM_027597	ENSMUSG00000056987	Fam71d	4921509E07Rik|4930516C23Rik|GARI-L2	family with sequence similarity 71, member D	protein-coding
common_peak2-31225-30-19-0.84774731460451-1.46094028072561	chr8	69850378	69851248	+	0	NA	Intergenic	Lx3C|LINE|L1	-163844	NM_008673	17960	Mm.14125	NM_008673	ENSMUSG00000025588	Nat1	Nat-1	N-acetyl transferase 1	protein-coding
unique_peak2-38319-3-6--1.22133801201688-1.08602067057793	chr6	146019577	146019998	+	0	NA	Intergenic	Intergenic	137120	NM_010656	16651	Mm.49689	NM_010656	ENSMUSG00000030255	Sspn	Krag	sarcospan	protein-coding
common_peak2-30894-35-115--1.42661073666507-7.69534480236183	chr7	142094351	142096022	+	0	NA	intron (NM_001143802, intron 2 of 3)	intron (NM_001143802, intron 2 of 3)	34927	NM_001143802	627214	Mm.323610	NM_001143802	ENSMUSG00000073805	Fam196a	B830028B13Rik	family with sequence similarity 196, member A	protein-coding
unique_peak2-38221-2-8--2.08737925770563-1.65811743852845	chr6	115037390	115037838	+	0	NA	Intergenic	MTC|LTR|MaLR	-47306	NM_013681	20965	Mm.441431	NM_013681	ENSMUSG00000009394	Syn2	2900074L19Rik|AI836018|AI841723	synapsin II	protein-coding
common_peak2-21666-50-49-0.397084126704228-0.848735523516959	chr11	103114597	103115683	+	0	NA	intron (NM_016896, intron 1 of 15)	intron (NM_016896, intron 1 of 15)	13575	NM_016896	53859	Mm.158981	NM_016896	ENSMUSG00000020941	Map3k14	Nik|aly	mitogen-activated protein kinase kinase kinase 14	protein-coding
unique_peak2-38879-12-27--1.15857893696997-1.38791538138627	chr8	105496465	105497202	+	0	NA	Intergenic	Lx3C|LINE|L1	-187822	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
common_peak2-26731-9-6-0.382258484346616-1.11707584880836	chr2	131427224	131427622	+	0	NA	Intergenic	ORR1C1|LTR|MaLR	-39402	NM_013460	11550	Mm.389380	NM_013460		Adra1d	Adra-1|Adra1|Adra1a|Gpcr8|Spr8|[a]1d|alpha1D-AR	adrenergic receptor, alpha 1d	protein-coding
common_peak1-12295-26-30--0.0262972182284127-0.301029995663988	chr17	46247854	46248844	+	0	NA	intron (NM_026768, intron 1 of 5)	intron (NM_026768, intron 1 of 5)	396	NM_026768	68565	Mm.287443	NM_026768	ENSMUSG00000023967	Mrps18a	1110004O20Rik|C79712	mitochondrial ribosomal protein S18A	protein-coding
common_peak2-24932-25-22-0.338287949288093-0.51032171069054	chr17	88510625	88511289	+	0	NA	Intergenic	Intergenic	-13895	NM_001190356	225058	Mm.312053	NM_001190356		Gm4832	EG225058	predicted gene 4832	protein-coding
common_peak1-13536-81-65-0.827655483650112-3.5726105993115	chr2	168229666	168231152	+	0	NA	Intergenic	Intergenic	-135578	NM_001081134	241794	Mm.425102	NM_001081134	ENSMUSG00000074575	Kcng1	AW536275|OTTMUSG00000016048	potassium voltage-gated channel, subfamily G, member 1	protein-coding
common_peak1-13606-64-136--0.632585681251923-2.55195960510772	chr2	19657675	19658948	+	0	NA	Intergenic	Intergenic	78622	NM_027715	71198	Mm.83981	NM_027715	ENSMUSG00000043415	Otud1	4933428L19Rik	OTU domain containing 1	protein-coding
unique_peak2-38550-0-7--3.84013093047421-1.80617997398389	chr7	58677350	58677652	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-88898	NR_073508	233246	Mm.254431	NM_177694	ENSMUSG00000055489	Ano5	9330162L24|Gdd1|Tmem16e	anoctamin 5	protein-coding
common_peak2-26353-20-26--0.266812717572275-0.373496418836697	chr2	37442545	37443248	+	0	NA	intron (NM_009261, intron 15 of 16)	B1_Mm|SINE|Alu	59909	NM_009261	20744	Mm.237095	NM_009261	ENSMUSG00000026915	Strbp	6430510M02Rik|AI852513|C230082I21Rik|C86322|Spnr	spermatid perinuclear RNA binding protein	protein-coding
common_peak2-27639-23-69--1.40751551243589-4.68503138941357	chr3	107630624	107632312	+	0	NA	Intergenic	Intergenic	-48680	NM_133867	99662	Mm.108491	NM_133867	ENSMUSG00000040600	Eps8l3	AI504489|Eps8r3	EPS8-like 3	protein-coding
common_peak1-15568-11-9-0.186765489364251-0.344532117358383	chr4	126217137	126217784	+	0	NA	Intergenic	B4|SINE|B4	-6758	NM_153177	76850	Mm.86705	NM_153177	ENSMUSG00000042500	Ago4	5730550L01Rik|AI481660|Eif2c4	argonaute RISC catalytic subunit 4	protein-coding
unique_peak2-37628-4-7--1.02346051385325-1.09384600808989	chr5	66756679	66757029	+	0	NA	intron (NM_001201413, intron 9 of 16)	intron (NM_001201413, intron 9 of 16)	-27950	NM_001201416	11787	Mm.5159	NM_009686	ENSMUSG00000029207	Apbb2	2310007D03Rik|FE65L1|Rirl1|TR2L|Zfra	amyloid beta (A4) precursor protein-binding, family B, member 2	protein-coding
common_peak1-7491-35-30-0.477173948075629-0.806432121853427	chr1	9943410	9944918	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-9965	NR_024067	73824	Mm.28311	NR_024067	ENSMUSG00000098234	Snhg6	1110008H02Rik	small nucleolar RNA host gene 6	ncRNA
common_peak1-16436-26-22-0.404337136101449-0.569352520859861	chr5	134675501	134676427	+	0	NA	intron (NM_053266, intron 6 of 15)	intron (NM_053266, intron 6 of 15)	16056	NM_053266	114674	Mm.218744	NM_053266	ENSMUSG00000015942	Gtf2ird2	1700012P16Rik	GTF2I repeat domain containing 2	protein-coding
common_peak1-16986-15-7-1.01216475055566-1.08658567012551	chr6	87511194	87511922	+	0	NA	Intergenic	L1M5|LINE|L1	-28305	NM_001286610	232201	Mm.119564	NM_175476		Arhgap25	A130039I20Rik	Rho GTPase activating protein 25	protein-coding
common_peak2-27149-7-6--0.00826409175941478-0.97990265578305	chr3	29976468	29976987	+	0	NA	Intergenic	Intergenic	-64601	NM_007963	14013	Mm.56965	NM_007963	ENSMUSG00000027684	Mecom	D630039M04Rik|Evi-1|Evi1|Jbo|Mds|Mds1|Mds1-Evi1|Prdm3|Znfpr1b1	MDS1 and EVI1 complex locus	protein-coding
common_peak1-18601-21-10-1.11005764662894-1.59083646988122	chr8	106737947	106738904	+	0	NA	intron (NM_001141925, intron 3 of 4)	intron (NM_001141925, intron 3 of 4)	34033	NR_045642	57813	Mm.183110	NM_021028	ENSMUSG00000035824	Tk2	AU024611|mt-TK	thymidine kinase 2, mitochondrial	protein-coding
common_peak2-24104-7-6--0.00826409175941478-0.97990265578305	chr16	32661397	32661680	+	0	NA	intron (NM_001110147, intron 1 of 13)	intron (NM_001110147, intron 1 of 13)	6745	NR_033493	675921	Mm.404316	NR_033493	ENSMUSG00000075265	Tnk2os	ENSMUSG00000075265|Gm10818	tyrosine kinase, non-receptor 2, opposite strand	ncRNA
common_peak2-25994-8-6-0.197867495889966-1.03789460276074	chr19	55256529	55256815	+	0	NA	intron (NM_009348, intron 2 of 9)	intron (NM_009348, intron 2 of 9)	1297	NM_009348	21684	Mm.42139	NM_009348	ENSMUSG00000024979	Tectb	Tctnb	tectorin beta	protein-coding
unique_peak2-34258-7-9--0.522837264589173-1.05908390183068	chr13	63272654	63272987	+	0	NA	intron (NM_001289926, intron 7 of 15)	intron (NM_001289926, intron 7 of 15)	-68518	NR_110520	72061	Mm.188105	NM_028079	ENSMUSG00000021458	2010111I01Rik	2300006M17Rik|AP-O|Aopep	RIKEN cDNA 2010111I01 gene	protein-coding
common_peak1-10021-42-50-0.0699039858956887-0.334445504886124	chr13	8995478	8996744	+	0	NA	promoter-TSS (NM_027000)	promoter-TSS (NM_027000)	-853	NM_027000	69237	Mm.41800	NM_027000	ENSMUSG00000021149	Gtpbp4	2610028C09Rik|Crfg|Gtpbp3|NGB|Nog1	GTP binding protein 4	protein-coding
common_peak2-23271-38-46-0.0168638076208927-0.31027100108714	chr15	25932735	25934236	+	0	NA	Intergenic	Intergenic	19364	NM_144523	52521	Mm.29145	NM_144523	ENSMUSG00000052253	Zfp622	1110033B05Rik|D15Ertd806e|ZPR9|Znf622	zinc finger protein 622	protein-coding
common_peak2-25602-11-15--0.491306415748387-0.435191258261915	chr19	8870889	8871440	+	0	NA	intron (NM_026329, intron 3 of 7)	B1_Mus1|SINE|Alu	1883	NM_026329	67710	Mm.22117	NM_026329	ENSMUSG00000071662	Polr2g	2410046K11Rik|A230108L04Rik|C76415|RBP7|Rpo2-7l	polymerase (RNA) II (DNA directed) polypeptide G	protein-coding
unique_peak2-37034-3-8--1.58390809140159-1.39487600375387	chr3	131508530	131508872	+	0	NA	Intergenic	Intergenic	-239555	NM_020265	56811	Mm.103593	NM_020265	ENSMUSG00000028031	Dkk2	-	dickkopf homolog 2 (Xenopus laevis)	protein-coding
common_peak2-27364-7-6--0.00826409175941478-0.97990265578305	chr3	84039795	84040184	+	0	NA	intron (NM_001271726, intron 1 of 11)	intron (NM_001271726, intron 1 of 11)	-15190	NM_030706	80890	Mm.44876	NM_030706	ENSMUSG00000027993	Trim2	mKIAA0517|narf	tripartite motif-containing 2	protein-coding
common_peak1-11223-75-68-0.630542534965116-2.20429099310061	chr15	79322602	79324859	+	0	NA	intron (NM_008427, intron 1 of 1)	(GGAA)n|Simple_repeat|Simple_repeat	11941	NM_008427	16520	Mm.140760	NM_008427	ENSMUSG00000044216	Kcnj4	IRK3|Kcnf2|MB-IRK3	potassium inwardly-rectifying channel, subfamily J, member 4	protein-coding
unique_peak1-1266-11-2-1.92373108353046-2.32232533660526	chr11	117254621	117255211	+	0	NA	Intergenic	B2_Mm2|SINE|B2	61289	NM_001113488	53860	Mm.38450	NM_017380	ENSMUSG00000059248	Sept9	MSF1|Msf|PNUTL4|Sint1	septin 9	protein-coding
unique_peak2-35243-2-5--1.50241675698448-1.08602067057793	chr16	96151150	96151559	+	0	NA	promoter-TSS (NR_040484)	promoter-TSS (NR_040484)	-670	NR_040484	69776	Mm.120470	NR_040484	ENSMUSG00000086899	1600002D24Rik	-	RIKEN cDNA 1600002D24 gene	ncRNA
unique_peak2-36766-8-9--0.316705676939792-1.03275496310833	chr3	65373570	65374026	+	0	NA	Intergenic	RSINE1|SINE|B4	-40462	NR_027955	71004	Mm.475465	NM_001033527	ENSMUSG00000074580	4931440P22Rik	-	RIKEN cDNA 4931440P22 gene	ncRNA
common_peak1-19316-12-8-0.478850983645327-0.562038191119709	chr9	123123698	123124274	+	0	NA	intron (NM_133974, intron 1 of 8)	intron (NM_133974, intron 1 of 8)	1170	NM_133974	109332	Mm.27519	NM_133974	ENSMUSG00000035498	Cdcp1	9030022E12Rik|AA409659|E030027H19Rik	CUB domain containing protein 1	protein-coding
common_peak1-14468-35-32-0.386976139104051-0.652627812244279	chr3	94649447	94650809	+	0	NA	intron (NM_172683, intron 1 of 18)	intron (NM_172683, intron 1 of 18)	8639	NM_172683	229584	Mm.274787	NM_172683	ENSMUSG00000038902	Pogz	9530006B08Rik	pogo transposable element with ZNF domain	protein-coding
unique_peak1-4319-28-12-1.35251940168037-2.51395164919446	chr2	150875702	150876980	+	0	NA	Intergenic	B1_Mur4|SINE|Alu	-11226	NM_026086	67311	Mm.480682	NM_026086	ENSMUSG00000053916	Nanp	1600031M04Rik|Hdhd4	N-acetylneuraminic acid phosphatase	protein-coding
unique_peak1-3105-6-2-0.980435609659146-1.26211192963361	chr18	25723025	25723493	+	0	NA	intron (NM_001146294, intron 2 of 12)	intron (NM_001146294, intron 2 of 12)	189225	NM_133195	108013	Mm.266435	NM_133195	ENSMUSG00000024268	Celf4	A230070D14Rik|BRUNOL-4|Brul4|Brunol4|C130060B05Rik	CUGBP, Elav-like family member 4	protein-coding
common_peak1-13032-10-9-0.0344872501214071-1.05503135781948	chr19	5510811	5511394	+	0	NA	promoter-TSS (NM_001024560)	promoter-TSS (NM_001024560)	-613	NM_001024560	225861	Mm.20071	NM_001024560	ENSMUSG00000056185	Snx32	B930037P14Rik|Snx6b	sorting nexin 32	protein-coding
common_peak2-24478-20-17-0.318149783148881-0.440610794044987	chr17	24644502	24645334	+	0	NA	TTS (NM_001172114)	TTS (NM_001172114)	19190	NM_027937	268932	Mm.70989	NM_027937	ENSMUSG00000033597	Caskin1	3300002N10Rik|C130061I24|C630036E02Rik|mKIAA1306	CASK interacting protein 1	protein-coding
common_peak2-19793-146-180-0.393757938362501-2.05424909928833	chr1	86524619	86526336	+	0	NA	Intergenic	Intergenic	969908	NM_030194	109032	Mm.335802	NM_030194	ENSMUSG00000070034	Sp110	5031415C07Rik|52kDa|5830484A20Rik|ENSMUSG00000075603|Ifi75|Ipr1	Sp110 nuclear body protein	protein-coding
unique_peak2-39293-5-15--1.70438033600585-1.4372489031793	chr8	123277411	123278031	+	0	NA	intron (NM_008320, intron 7 of 8)	intron (NM_008320, intron 7 of 8)	17445	NM_008320	15900	Mm.334861	NM_008320	ENSMUSG00000041515	Irf8	AI893568|ICSBP|IRF-8|Icsbp1|Myls	interferon regulatory factor 8	protein-coding
unique_peak2-33418-3-7--1.41398308995928-1.23214870625617	chr11	59670867	59671323	+	0	NA	intron (NM_134029, intron 2 of 4)	B3|SINE|B2	9520	NM_134029	103850	Mm.41761	NM_134029	ENSMUSG00000032615	Nt5m	2010013E09Rik|AI846937|dNT-2	5',3'-nucleotidase, mitochondrial	protein-coding
common_peak1-18953-24-29--0.113680692840802-0.304839791830752	chr9	50768079	50768857	+	0	NA	intron (NM_178710, intron 3 of 15)	intron (NM_178710, intron 3 of 15)	48710	NM_178710	235344	Mm.104932	NM_178710	ENSMUSG00000037112	Sik2	G630080D20Rik|Snf1lk2	salt inducible kinase 2	protein-coding
common_peak2-21980-111-131-0.373299672051715-1.45486652109021	chr12	51828537	51830313	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-79215	NM_008858	18760	Mm.133719	NM_008858	ENSMUSG00000002688	Prkd1	PKD|PKD1|Pkcm|Prkcm	protein kinase D1	protein-coding
common_peak2-23101-15-9-0.690236655668294-0.732381977911291	chr14	76947335	76948012	+	0	NA	intron (NR_027699, intron 3 of 4)	RLTR15|LTR|ERVK	8821	NM_001160326	72661	Mm.320384	NM_001160326	ENSMUSG00000052584	Serp2	2810032E02Rik	stress-associated endoplasmic reticulum protein family member 2	protein-coding
unique_peak1-969-10-1-2.35641534500877-2.57096726280955	chr11	61611042	61611614	+	0	NA	intron (NM_013881, intron 20 of 26)	B1_Mus2|SINE|Alu	-35738	NM_001164243	212627	Mm.27703	NM_144806	ENSMUSG00000020528	Prpsap2	A230054F23Rik	phosphoribosyl pyrophosphate synthetase-associated protein 2	protein-coding
common_peak2-22760-11-13--0.298661337805991-0.337263207250336	chr13	115089669	115090261	+	0	NA	intron (NM_010887, intron 4 of 4)	intron (NM_010887, intron 4 of 4)	88337	NM_010887	17993	Mm.253142	NM_010887	ENSMUSG00000021764	Ndufs4	6720411N02Rik|C1-18k	NADH dehydrogenase (ubiquinone) Fe-S protein 4	protein-coding
common_peak2-30523-23-25-0.0213277863679888-0.30528805757448	chr7	66375825	66376827	+	0	NA	Intergenic	RMER6B|LTR|ERVK	-107794	NM_173010	22215	Mm.9002	NM_011668	ENSMUSG00000025326	Ube3a	4732496B02|5830462N02Rik|A130086L21Rik|Hpve6a|mKIAA4216	ubiquitin protein ligase E3A	protein-coding
common_peak2-26973-23-54--1.05959220901558-2.47480076710858	chr2	167348446	167349231	+	0	NA	Intergenic	MERVL-int|LTR|ERVL	-14889	NM_011427	20613	Mm.2093	NM_011427	ENSMUSG00000042821	Snai1	AI194338|Sna|Sna1|Snail|Snail1	snail family zinc finger 1	protein-coding
common_peak1-17029-9-10--0.269818212233077-1.05503135781948	chr6	91684143	91684534	+	0	NA	intron (NM_009320, intron 5 of 14)	MIRb|SINE|MIR	50277	NM_009320	21366	Mm.395650	NM_009320	ENSMUSG00000030096	Slc6a6	AA589629|C80501|Taut	solute carrier family 6 (neurotransmitter transporter, taurine), member 6	protein-coding
common_peak1-13799-25-8-1.69192490390279-3.04993787975775	chr2	44526106	44527075	+	0	NA	intron (NM_172662, intron 5 of 10)	L1Md_F|LINE|L1	190552	NM_172662	227835	Mm.314312	NM_172662	ENSMUSG00000036890	Gtdc1	E330008O22Rik	glycosyltransferase-like domain containing 1	protein-coding
common_peak1-14890-15-9-0.690236655668294-0.732381977911291	chr3	96162227	96163056	+	0	NA	Intergenic	Intergenic	56115	NR_001579	21748		NR_001579	ENSMUSG00000064796	Terc	mTER|mTR	telomerase RNA component	ncRNA
unique_peak2-34662-5-9--1.02630843089322-1.21398586181642	chr15	77823733	77824172	+	0	NA	TTS (NM_007583)	TTS (NM_007583)	-22698	NM_018749	55944	Mm.3955	NM_018749	ENSMUSG00000016554	Eif3d	66/67kDa|AA407891|Eif3s7|eIF3p66	eukaryotic translation initiation factor 3, subunit D	protein-coding
common_peak2-21206-36-52--0.248599368395444-0.410818340144431	chr11	61407811	61408799	+	0	NA	Intergenic	RLTR10-int|LTR|ERVK	-15116	NM_001252189	13855	Mm.139695	NM_010148	ENSMUSG00000001036	Epn2	9530051D10Rik|AA536924|Ibp2	epsin 2	protein-coding
unique_peak2-36438-2-7--1.91745425626332-1.45399745587252	chr2	132126187	132126660	+	0	NA	intron (NM_138651, intron 8 of 12)	intron (NM_138651, intron 8 of 12)	14748	NM_001291039	110911	Mm.284503	NM_138651	ENSMUSG00000058793	Cds2	5730450N06Rik|5730460C18Rik|AI854580|D2Wsu127e	CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2	protein-coding
common_peak2-25921-10-5-0.771452844287613-1.33892459842472	chr19	46460144	46460641	+	0	NA	intron (NM_016860, intron 2 of 10)	intron (NM_016860, intron 2 of 10)	9833	NM_016860	54130	Mm.3118	NM_016860	ENSMUSG00000025228	Actr1a	Arp1|alpha-Arp1	ARP1 actin-related protein 1A, centractin alpha	protein-coding
common_peak2-26707-15-9-0.690236655668294-0.732381977911291	chr2	128470369	128470777	+	0	NA	intron (NM_008569, intron 27 of 47)	MTEa|LTR|MaLR	42558	NM_008569	17222	Mm.277408	NM_008569	ENSMUSG00000014355	Anapc1	2610021O03Rik|AI047775|AI853536|AW547281|Apc1|Mcpr|tsg24	anaphase promoting complex subunit 1	protein-coding
unique_peak1-3627-10-1-2.35641534500877-2.57096726280955	chr19	37029681	37030263	+	0	NA	intron (NM_001080706, intron 4 of 37)	intron (NM_001080706, intron 4 of 37)	29403	NM_001080706	107182	Mm.295062	NM_001080706	ENSMUSG00000040565	Btaf1	AI414500|AI447930|E430027O22Rik|TAF170	BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, (Mot1 homolog, S. cerevisiae)	protein-coding
common_peak2-26457-15-8-0.842239749113344-0.891319708951327	chr2	73529351	73529755	+	0	NA	intron (NM_001113246, intron 5 of 12)	intron (NM_001113246, intron 5 of 12)	-31073	NM_001166604	108699	Mm.257073	NM_029716	ENSMUSG00000056486	Chn1	0610007I19Rik|0710001E19Rik|1700112L09Rik|2900046J01Rik|AI413815|ARHGAP2	chimerin 1	protein-coding
common_peak1-18033-11-9-0.186765489364251-0.344532117358383	chr7	143518070	143518666	+	0	NA	Intergenic	Intergenic	22730	NR_040459	330664	Mm.127762	NR_040459		C230079O03Rik	C230079O03	RIKEN cDNA C230079O03 gene	ncRNA
unique_peak2-34884-2-5--1.50241675698448-1.08602067057793	chr15	79882937	79883209	+	0	NA	Intergenic	Intergenic	25936	NR_028282	100302601		NR_028282		Snord83b	MBII-10	small nucleolar RNA, C/D box 83B	snoRNA
unique_peak1-830-11-1-2.50869358425161-2.83420869758413	chr11	8615143	8615677	+	0	NA	Intergenic	Intergenic	-50872	NM_001083587	319939	Mm.337820	NM_001083587	ENSMUSG00000020422	Tns3	BC023928|F830010I22Rik|TEM6|Tens1	tensin 3	protein-coding
unique_peak2-34766-4-7--1.02346051385325-1.09384600808989	chr15	58998061	58998492	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-84695	NM_144800	211401	Mm.215481	NM_144800	ENSMUSG00000022353	Mtss1	2310003N14Rik|BC024131|D130001D01Rik|Mim|mKIAA0429	metastasis suppressor 1	protein-coding
unique_peak2-33770-4-13--1.83081543591085-2.04196296489515	chr11	118289110	118289639	+	0	NA	promoter-TSS (NM_001204129)	promoter-TSS (NM_001204129)	-397	NM_001204129	56745	Mm.23845	NM_019959		C1qtnf1	1600017K21Rik|CTRP1|Zsig37	C1q and tumor necrosis factor related protein 1	protein-coding
common_peak2-28837-17-16-0.130833496954699-0.356936432242225	chr5	66620149	66621044	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-30768	NM_027602	70918	Mm.23166	NM_027602	ENSMUSG00000029206	Nsun7	4921525L17Rik	NOL1/NOP2/Sun domain family, member 7	protein-coding
common_peak2-21148-12-13--0.158578936969966-0.301029995663979	chr11	57674248	57674906	+	0	NA	Intergenic	Intergenic	-28928	NM_008213	15110	Mm.4746	NM_008213	ENSMUSG00000037335	Hand1	Ehand1|Hxt|Th1|Thing1|bHLHa27|eHAND	heart and neural crest derivatives expressed transcript 1	protein-coding
unique_peak2-39459-10-11--0.228547155712387-0.31137425193576	chr9	53356617	53357271	+	0	NA	intron (NM_001081152, intron 2 of 17)	intron (NM_001081152, intron 2 of 17)	11792	NM_001081152	244879	Mm.116713	NM_001081152	ENSMUSG00000033054	Npat	6820401K01|AI427561|BB112559	nuclear protein in the AT region	protein-coding
common_peak2-26569-10-20--1.03590207776999-1.03889213727317	chr2	103484699	103485199	+	0	NA	intron (NM_178890, intron 1 of 16)	intron (NM_178890, intron 1 of 16)	78482	NM_178890	99382	Mm.35850	NM_178890	ENSMUSG00000032724	Abtb2	AW539457|BPOZ-2	ankyrin repeat and BTB (POZ) domain containing 2	protein-coding
common_peak2-29996-4-9--1.34538860874061-1.36011389749466	chr6	124478399	124478894	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	13693	NM_144938	50908	Mm.219527	NM_144938	ENSMUSG00000038521	C1s1	AA959438|AI255193|AI327365|C1s|C1sa	complement component 1, s subcomponent 1	protein-coding
common_peak1-8527-21-34--0.559793751678731-0.677299098039755	chr10	86778042	86778980	+	0	NA	Intergenic	MYSERV16_I-int|LTR|ERVK	177894	NM_008553	17172	Mm.136217	NM_008553	ENSMUSG00000020052	Ascl1	AI225900|ASH1|Mash1|bHLHa46	achaete-scute complex homolog 1 (Drosophila)	protein-coding
common_peak2-27156-32-25-0.578652301078568-0.97145127402441	chr3	30513299	30514556	+	0	NA	intron (NM_030557, intron 7 of 7)	intron (NM_030557, intron 7 of 7)	12918	NM_001289621	80732	Mm.200378	NM_030557	ENSMUSG00000037730	Mynn	2810011C24Rik|AA415053|AI661031|AW049392|Mynr|SBBIZ1	myoneurin	protein-coding
common_peak1-11331-31-26-0.470351168649655-0.720235944639222	chr15	85879190	85880279	+	0	NA	Intergenic	Intergenic	-8391	NM_172611	223752	Mm.24442	NM_172611	ENSMUSG00000035900	Gramd4	9930016O13	GRAM domain containing 4	protein-coding
common_peak2-22127-10-6-0.549060422951165-1.21398586181642	chr12	84614864	84615189	+	0	NA	intron (NM_001267625, intron 2 of 10)	intron (NM_001267625, intron 2 of 10)	213660	NM_001267626	70127	Mm.151308	NM_058212	ENSMUSG00000021221	Dpf3	2810403B03Rik|6530402L11Rik|BAF45C|C78788|CERD4|cer-d4	D4, zinc and double PHD fingers, family 3	protein-coding
unique_peak2-33008-14-39--1.42271193452972-2.70027529094734	chr10	62920250	62921325	+	0	NA	intron (NM_001164376, intron 1 of 17)	intron (NM_001164376, intron 1 of 17)	528	NM_001164376	216033	Mm.444692	NM_177612	ENSMUSG00000060843	Ctnna3	4930429L08Rik|4933408A16|Catna3|Vr22	catenin (cadherin associated protein), alpha 3	protein-coding
unique_peak2-32869-9-13--0.617741515653384-0.459837087125828	chr10	7188828	7189455	+	0	NA	Intergenic	L1M|LINE|L1	-24207	NR_045946	619314	Mm.145928	NR_045946		B020014A21Rik	-	RIKEN cDNA B020014A21 gene	ncRNA
common_peak1-13780-9-8-0.0196884049619079-1.03275496310833	chr2	37443269	37443833	+	0	NA	intron (NM_009261, intron 15 of 16)	intron (NM_009261, intron 15 of 16)	59254	NM_009261	20744	Mm.237095	NM_009261	ENSMUSG00000026915	Strbp	6430510M02Rik|AI852513|C230082I21Rik|C86322|Spnr	spermatid perinuclear RNA binding protein	protein-coding
common_peak2-29012-15-9-0.690236655668294-0.732381977911291	chr5	110809696	110810129	+	0	NA	intron (NM_028596, intron 1 of 11)	intron (NM_028596, intron 1 of 11)	6234	NM_028596	381668	Mm.348782	NM_028596	ENSMUSG00000043323	Fbrsl1	2410025L10Rik|AI467568|Gm1049|mKIAA1545	fibrosin-like 1	protein-coding
unique_peak2-35292-3-8--1.58390809140159-1.39487600375387	chr17	7985929	7986299	+	0	NA	intron (NM_001081416, intron 1 of 19)	intron (NM_001081416, intron 1 of 19)	11725	NM_001081416	68655	Mm.379161	NM_001081416	ENSMUSG00000071984	Fndc1	1110027O12Rik|1110051A18Rik|mKIAA1866	fibronectin type III domain containing 1	protein-coding
common_peak1-10120-11-7-0.508693584251613-1.21681515183528	chr13	31332156	31332710	+	0	NA	intron (NR_045957, intron 1 of 2)	intron (NR_045957, intron 1 of 2)	522	NR_045957	73924	Mm.417825	NR_045957	ENSMUSG00000087460	4930401O12Rik	-	RIKEN cDNA 4930401O12 gene	ncRNA
unique_peak2-37844-1-7--2.62705701021674-1.80617997398389	chr5	135537329	135537666	+	0	NA	intron (NM_025375, intron 3 of 12)	RSINE1|SINE|B4	-2579	NM_025362	66114	Mm.178012	NM_025362	ENSMUSG00000061118	Dnajc30	1300007M11Rik|Wbscr18	DnaJ (Hsp40) homolog, subfamily C, member 30	protein-coding
unique_peak2-36595-1-8--2.79698201165906-2.05605744720049	chr2	176634999	176635581	+	0	NA	intron (NR_040256, intron 2 of 4)	MTA_Mm-int|LTR|MaLR	13852	NR_040256	626877	Mm.490744	NR_040256		Gm14405	OTTMUSG00000016573	predicted gene 14405	pseudo
common_peak2-24539-29-32-0.0678959612566574-0.330208782692001	chr17	27634590	27635422	+	0	NA	intron (NM_001291045, intron 1 of 9)	intron (NM_001291045, intron 1 of 9)	5472	NM_001013385	268934	Mm.358940	NM_001013385	ENSMUSG00000063239	Grm4	Gprc1d|mGluR4	glutamate receptor, metabotropic 4	protein-coding
unique_peak2-37908-6-14--1.34149248522822-1.01572999746118	chr5	143235203	143235771	+	0	NA	intron (NM_001122730, intron 16 of 18)	intron (NM_001122730, intron 16 of 18)	-41446	NR_110503	102631757	Mm.373036	NR_110502		LOC102631757	-	uncharacterized LOC102631757	ncRNA
common_peak1-16359-8-13--0.802132504110034-0.562038191119711	chr5	122284491	122285072	+	0	NA	intron (NM_008507, intron 1 of 7)	intron (NM_008507, intron 1 of 7)	2029	NM_008507	16923	Mm.65493	NM_008507	ENSMUSG00000042594	Sh2b3	AI429800|Lnk	SH2B adaptor protein 3	protein-coding
common_peak2-28350-10-17--0.813509656433543-0.699649909729472	chr4	135686172	135686902	+	0	NA	Intergenic	Intergenic	-13200	NM_008321	15903	Mm.110	NM_008321		Id3	Hlh462|Idb3|bHLHb25	inhibitor of DNA binding 3	protein-coding
common_peak1-11560-20-13-0.680719862533589-0.809260849721102	chr16	11193312	11194146	+	0	NA	exon (NM_025546, exon 9 of 9)	exon (NM_025546, exon 9 of 9)	9656	NM_025546	66409	Mm.28291	NM_025546	ENSMUSG00000005846	Rsl1d1	2410005K20Rik|C76439|pBK1	ribosomal L1 domain containing 1	protein-coding
unique_peak2-35012-5-6--0.511735258063458-0.947717972411649	chr15	101326972	101327375	+	0	NA	Intergenic	(CTGGGG)n|Simple_repeat|Simple_repeat	-5230	NM_001201323	100126226	Mm.347934	NM_001201323	ENSMUSG00000067613	5430421N21Rik	-	RIKEN cDNA 5430421N21 gene	protein-coding
unique_peak2-35069-4-8--1.19338551529556-1.21878474469819	chr16	14705127	14705498	+	0	NA	promoter-TSS (NM_011415)	promoter-TSS (NM_011415)	-640	NM_011415	20583	Mm.4272	NM_011415	ENSMUSG00000022676	Snai2	Slug|Slugh|Snail2	snail family zinc finger 2	protein-coding
common_peak1-9175-16-17--0.0516613591742505-0.301029995663984	chr11	78343497	78344077	+	0	NA	5' UTR (NM_001159392, exon 2 of 7)	5' UTR (NM_001159392, exon 2 of 7)	5975	NM_001159392	21927	Mm.386774	NM_009395	ENSMUSG00000017615	Tnfaip1	Edp-1|Edp1|Tnfip1	tumor necrosis factor, alpha-induced protein 1 (endothelial)	protein-coding
unique_peak1-2787-10-4-1.03448725012141-1.5150158574804	chr17	12230614	12231166	+	0	NA	intron (NM_016694, intron 10 of 11)	Lx7|LINE|L1	-81260	NM_026644	68262	Mm.258300	NM_026644	ENSMUSG00000023827	Agpat4	1500003P24Rik	1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)	protein-coding
common_peak2-21010-64-92--0.0737124093994277-0.320333561591435	chr11	29172819	29173662	+	0	NA	Intergenic	MTB|LTR|MaLR	-25968	NM_025740	216618	Mm.128663	NM_025740	ENSMUSG00000020462	Ccdc104	2300003H10|4931428D14Rik	coiled-coil domain containing 104	protein-coding
common_peak1-15895-15-17--0.157760250886656-0.307611222530528	chr5	16000383	16001125	+	0	NA	Intergenic	(GGA)n|Simple_repeat|Simple_repeat	-58559	NM_001289460	15234	Mm.267078	NM_010427	ENSMUSG00000028864	Hgf	C230052L06Rik|HGF/SF|NK1|NK2|SF|SF/HGF	hepatocyte growth factor	protein-coding
common_peak1-18762-9-6-0.382258484346616-1.11707584880836	chr8	126774594	126775101	+	0	NA	intron (NM_139272, intron 1 of 15)	intron (NM_139272, intron 1 of 15)	19553	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
unique_peak1-6571-8-0-3.00522241794757-2.70926996097583	chr7	135607027	135607574	+	0	NA	Intergenic	Intergenic	-2273	NM_009383	21843	Mm.242072	NM_009383	ENSMUSG00000030846	Tial1	5330433G13Rik|AL033329|TIAR|mTIAR	Tia1 cytotoxic granule-associated RNA binding protein-like 1	protein-coding
common_peak1-19321-17-23--0.366666162516118-0.383878263347744	chr9	123367000	123367495	+	0	NA	intron (NM_153168, intron 19 of 20)	Charlie10b|DNA|MER1_type	-20572	NM_013860	29806	Mm.10987	NM_013860	ENSMUSG00000025239	Limd1	AW822033|D9Ertd192e	LIM domains containing 1	protein-coding
common_peak1-12070-30-44--0.322177686837802-0.475038482441584	chr17	24072563	24073581	+	0	NA	Intergenic	Intergenic	-5891	NM_011321	20234	Mm.390958	NM_011321	ENSMUSG00000024128	Sbp	AV082137|AV082259|p25	spermine binding protein	protein-coding
unique_peak1-530-6-4-0.24347001549294-0.989110657569874	chr1	185229739	185230175	+	0	NA	Intergenic	Intergenic	345038	NM_016928	53791	Mm.116894	NM_016928	ENSMUSG00000079164	Tlr5	-	toll-like receptor 5	protein-coding
common_peak1-11954-51-57-0.216942830475001-0.476339052167849	chr17	5977164	5978798	+	0	NA	intron (NM_001113352, intron 2 of 25)	intron (NM_001113352, intron 2 of 25)	2395	NM_011523	20975	Mm.236068	NM_011523	ENSMUSG00000023805	Synj2	AI481647|SJ2|mKIAA0348	synaptojanin 2	protein-coding
common_peak2-24046-12-8-0.478850983645327-0.562038191119709	chr16	25406536	25406887	+	0	NA	intron (NM_175165, intron 4 of 5)	intron (NM_175165, intron 4 of 5)	119808	NM_175165	71338	Mm.126851	NM_175165	ENSMUSG00000048399	Tprg	5430420C16Rik|Tprg1	transformation related protein 63 regulated	protein-coding
unique_peak2-33349-0-6--3.64748585253182-1.56314192529759	chr11	29656374	29656754	+	0	NA	intron (NM_146016, intron 32 of 41)	intron (NM_146016, intron 32 of 41)	38001	NM_024226	68585	Mm.192580	NM_024226	ENSMUSG00000020458	Rtn4	1110020G17Rik|AA407876|AA409940|AA960376|ASY|C130026I10Rik|NOGO|NSP-CL|NgA|Nogo-A|Nogo-B|Nogo-C|mKIAA0886|mKIAA4153	reticulon 4	protein-coding
unique_peak1-1294-11-6-0.701338662194009-1.32595962126035	chr11	119917061	119917591	+	0	NA	Intergenic	Intergenic	-8867	NM_007377	11302	Mm.6826	NM_007377	ENSMUSG00000025375	Aatk	AATYK|aatyk1|mKIAA0641	apoptosis-associated tyrosine kinase	protein-coding
common_peak2-23731-19-28--0.455293668465885-0.518921928796332	chr15	96002621	96003704	+	0	NA	Intergenic	Intergenic	-10069	NR_028311	100043335	Mm.247464	NR_028311		Gm4371	EG667874|Gm8854	eukaryotic translation initiation factor 3, subunit I pseudogene	pseudo
unique_peak2-35068-5-7--0.704380336005853-1.01466476204226	chr16	14372786	14373227	+	0	NA	intron (NM_008576, intron 1 of 30)	intron (NM_008576, intron 1 of 30)	11355	NM_008576	17250	Mm.196634	NM_008576	ENSMUSG00000023088	Abcc1	Abcc1a|Abcc1b|MRP|Mdrap|Mrp1	ATP-binding cassette, sub-family C (CFTR/MRP), member 1	protein-coding
unique_peak1-5394-11-5-0.923731083530457-1.477227296591	chr5	103740027	103740746	+	0	NA	Intergenic	Intergenic	-12338	NR_040699	74624	Mm.389662	NR_040699		4930429D17Rik	-	RIKEN cDNA 4930429D17 gene	ncRNA
unique_peak1-4918-9-2-1.60465090568306-1.87199725847353	chr4	55592964	55593492	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	-47881	NM_010637	16600	Mm.4325	NM_010637	ENSMUSG00000003032	Klf4	EZF|Gklf|Zie	Kruppel-like factor 4 (gut)	protein-coding
common_peak1-12046-21-36--0.639964100362715-0.825714541185117	chr17	21566676	21567479	+	0	NA	intron (NM_011760, intron 2 of 3)	intron (NM_011760, intron 2 of 3)	6886	NM_011760	22712	Mm.12916	NM_011760	ENSMUSG00000023882	Zfp54	2810034D10Rik|KRAB10|Zfp-54|Zfp76|mszf83	zinc finger protein 54	protein-coding
unique_peak1-4351-9-0-3.18961340640422-3.01029995663981	chr2	155320515	155320987	+	0	NA	intron (NM_144786, intron 12 of 14)	intron (NM_144786, intron 12 of 14)	19831	NM_144786	207182	Mm.41757	NM_144786	ENSMUSG00000027603	Ggt7	1110017C11Rik|6330563L03Rik|Ggtl3	gamma-glutamyltransferase 7	protein-coding
common_peak1-7923-12-6-0.841421063030034-1.58711810488664	chr1	141463770	141464255	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	-7213	NM_015780	50702	Mm.220362	NM_015780	ENSMUSG00000057037	Cfhr1	AI194696|CFHRB|Cfhl1	complement factor H-related 1	protein-coding
common_peak2-30572-23-24-0.0779113147343562-0.318406410381916	chr7	79934818	79935761	+	0	NA	Intergenic	Intergenic	311665	NR_046024	625243	Mm.261798	NR_046024		Gm6567	-	predicted gene 6567	ncRNA
common_peak2-28688-20-51--1.2123649335499-2.87302884942463	chr5	33274685	33275214	+	0	NA	intron (NM_001025426, intron 25 of 42)	B3|SINE|B2	68579	NM_001025426	277854	Mm.101524	NM_177786	ENSMUSG00000037426	Depdc5	AV016528	DEP domain containing 5	protein-coding
unique_peak1-5602-6-9--0.75652998450706-1.11707584880836	chr6	83115610	83116132	+	0	NA	promoter-TSS (NM_001198867)	promoter-TSS (NM_001198867)	-47	NM_001198866	13191	Mm.6919	NM_007835	ENSMUSG00000031865	Dctn1	AL022633|Glued|p150|p150<glued>	dynactin 1	protein-coding
common_peak2-24879-8-8--0.164702583494742-1.00793137938329	chr17	83350522	83350856	+	0	NA	Intergenic	(CTTTG)n|Simple_repeat|Simple_repeat	126876	NR_045094	100503434	Mm.187281	NR_045094		Gm19689	-	predicted gene, 19689	ncRNA
unique_peak1-2222-13-5-1.19350952991661-1.95509489018123	chr15	74713591	74714201	+	0	NA	Intergenic	B4|SINE|B4	-1762	NM_025929	67038	Mm.154566	NM_025929	ENSMUSG00000063522	2010109I03Rik	-	RIKEN cDNA 2010109I03 gene	protein-coding
common_peak2-23462-17-19--0.103631756682325-0.301029995663974	chr15	72651873	72652687	+	0	NA	intron (NM_001164641, intron 17 of 17)	intron (NM_001164641, intron 17 of 17)	-11526	NR_002864	353342	Mm.440245	NR_002864		Peg13	-	paternally expressed 13	ncRNA
common_peak1-12931-67-54-0.763051769258335-2.57496839624365	chr19	6045503	6047900	+	0	NA	promoter-TSS (NM_001164709)	promoter-TSS (NM_001164709)	125	NM_028769	74126	Mm.149870	NM_028769	ENSMUSG00000024807	Syvn1	1200010C09Rik|AW211966|C85322|D530017H19Rik|Hrd1	synovial apoptosis inhibitor 1, synoviolin	protein-coding
common_peak1-16962-16-23--0.466698858453094-0.497202060940027	chr6	85936508	85937217	+	0	NA	Intergenic	URR1B|DNA|MER1_type	-25201	NM_028099	72102	Mm.24007	NM_028099	ENSMUSG00000030002	Dusp11	2010300F21Rik|AI481497	dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	protein-coding
common_peak2-31400-13-11-0.193509529916613-0.379391706698377	chr8	90869059	90869732	+	0	NA	intron (NM_012047, intron 8 of 16)	intron (NM_012047, intron 8 of 16)	16695	NM_012047	26992	Mm.5400	NM_012047		Brd7	BP75|CELTIX1|Ptpn13ip	bromodomain containing 7	protein-coding
common_peak2-29831-9-10--0.269818212233077-1.05503135781948	chr6	94225379	94225795	+	0	NA	intron (NM_001286784, intron 1 of 22)	L2a|LINE|L2	8324	NM_001286786	14924	Mm.217216	NM_010367	ENSMUSG00000045095	Magi1	AIP3|BAP1|Baiap1|Gukmi1|MAGI1c|Magi-1|TNRC19|WWP3|mKIAA4129	membrane associated guanylate kinase, WW and PDZ domain containing 1	protein-coding
common_peak1-12600-26-45--0.595662863898551-0.956885677565398	chr18	25168487	25169547	+	0	NA	intron (NM_001289654, intron 10 of 24)	intron (NM_001289654, intron 10 of 24)	155449	NM_001142697	66648	Mm.263189	NM_001004361	ENSMUSG00000024269	Tpgs2	5730437P09Rik|5730494M16Rik|AI666318|Pgs2	tubulin polyglutamylase complex subunit 2	protein-coding
unique_peak1-1422-9-1-2.18961340640422-2.31132995230379	chr12	80833347	80833848	+	0	NA	intron (NM_009014, intron 8 of 10)	intron (NM_009014, intron 8 of 10)	380403	NM_007564	12192	Mm.235132	NM_007564	ENSMUSG00000021127	Zfp36l1	AW742437|AW743212|Berg36|Brf1|D530020L18Rik|ERF1|TIS11b|cMG1	zinc finger protein 36, C3H type-like 1	protein-coding
unique_peak2-33030-6-6--0.241956811677302-0.947717972411649	chr10	69662444	69662846	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	-4770	NR_038041	69563	Mm.64672	NR_038041	ENSMUSG00000019933	2310015B20Rik	-	RIKEN cDNA 2310015B20 gene	ncRNA
common_peak1-16292-48-99--0.67292903853991-2.05279581805583	chr5	112342530	112343974	+	0	NA	Intergenic	Intergenic	-152504	NR_045833	269683	Mm.136946	NM_207252	ENSMUSG00000085271	E130006D01Rik	Gm16018|Gm681|OTTMUSG00000029083	RIKEN cDNA E130006D01 gene	ncRNA
common_peak1-11134-68-101--0.102464562673199-0.340920414422423	chr15	68257806	68259266	+	0	NA	Intergenic	Intergenic	-85685	NR_029718	387228		NR_029718	miRBase:MI0000549	Mir30d	Mirn30d|mmu-mir-30d	microRNA 30d	ncRNA
unique_peak1-2665-8-0-3.00522241794757-2.70926996097583	chr16	55531754	55532260	+	0	NA	Intergenic	Intergenic	-248657	NM_178720	239852	Mm.245045	NM_178720	ENSMUSG00000064310	Zpld1	9430016A21Rik	zona pellucida like domain containing 1	protein-coding
unique_peak2-37931-5-7--0.704380336005853-1.01466476204226	chr5	146695123	146695573	+	0	NA	Intergenic	Lx4B|LINE|L1	-3918	NM_007818	13112	Mm.332844	NM_007818	ENSMUSG00000056035	Cyp3a11	AI256190|Cyp3a|IIIAm1|Pcn	cytochrome P450, family 3, subfamily a, polypeptide 11	protein-coding
common_peak1-19441-10-11--0.228547155712387-0.31137425193576	chrX	95165995	95166449	+	0	NA	Intergenic	L1Md_T|LINE|L1	-178867	NM_013476	11835	Mm.39005	NM_013476		Ar	AW320017|Tfm	androgen receptor	protein-coding
common_peak2-19750-11-9-0.186765489364251-0.344532117358383	chr1	75214287	75214790	+	0	NA	intron (NM_009447, intron 1 of 3)	intron (NM_009447, intron 1 of 3)	1290	NM_009447	22145	Mm.1155	NM_009447	ENSMUSG00000026202	Tuba4a	M[a]4|Tuba4	tubulin, alpha 4A	protein-coding
unique_peak2-38096-4-5--0.608423014574403-0.909929411522249	chr6	65607502	65607833	+	0	NA	Intergenic	RMER19B|LTR|ERVK	-13938	NM_172399	68169	Mm.52392	NM_172399	ENSMUSG00000049001	Ndnf	A930038C07Rik|epidermacan	neuron-derived neurotrophic factor	protein-coding
common_peak1-16285-11-12--0.191746133889479-0.310474156842889	chr5	110869171	110869682	+	0	NA	intron (NM_001142642, intron 1 of 18)	intron (NM_001142642, intron 1 of 18)	8096	NM_001142642	381668	Mm.348782	NM_028596	ENSMUSG00000043323	Fbrsl1	2410025L10Rik|AI467568|Gm1049|mKIAA1545	fibrosin-like 1	protein-coding
common_peak1-15291-19-14-0.495796731053168-0.607095980551316	chr4	41568839	41569640	+	0	NA	intron (NM_175138, intron 12 of 19)	intron (NM_175138, intron 12 of 19)	18096	NM_027147	69638	Mm.372459	NM_027147	ENSMUSG00000028445	Enho	1110065P19Rik|2310040A07Rik	energy homeostasis associated	protein-coding
common_peak1-8624-80-177--0.625157664597046-3.18151589331345	chr10	117845070	117846498	+	0	NA	Intergenic	Intergenic	-32319	NM_008337	15978	Mm.240327	NM_008337	ENSMUSG00000055170	Ifng	IFN-g|Ifg	interferon gamma	protein-coding
common_peak1-15586-32-27-0.471737097162056-0.777451270049544	chr4	129247580	129248721	+	0	NA	intron (NM_001162433, intron 1 of 12)	intron (NM_001162433, intron 1 of 12)	2735	NM_001162433	16818	Mm.293753	NM_010693	ENSMUSG00000000409	Lck	Hck-3|Lsk|Lskt|p56<lck>|p56Lck	lymphocyte protein tyrosine kinase	protein-coding
common_peak1-17850-21-17-0.399564263823923-0.561823156887258	chr7	112276721	112277667	+	0	NA	Intergenic	Intergenic	7221	NM_207557	404318	Mm.377938	NM_207557	ENSMUSG00000095248	Olfr681	MOR4014	olfactory receptor 681	protein-coding
common_peak2-22278-33-16-1.24387472127519-2.60849961611298	chr13	9014133	9014865	+	0	NA	Intergenic	B3|SINE|B2	-19241	NM_027000	69237	Mm.41800	NM_027000	ENSMUSG00000021149	Gtpbp4	2610028C09Rik|Crfg|Gtpbp3|NGB|Nog1	GTP binding protein 4	protein-coding
common_peak2-30654-53-61-0.186776702029054-0.465693198848476	chr7	99979554	99980445	+	0	NA	intron (NM_029494, intron 4 of 4)	Lx6|LINE|L1	42743	NM_001080995	74041	Mm.26468	NM_028729	ENSMUSG00000030641	Ddias	4632434I11Rik|noxin	DNA damage-induced apoptosis suppressor	protein-coding
common_peak1-10190-70-107--0.13492058578807-0.386857220532368	chr13	43479714	43482047	+	0	NA	exon (NM_178848, exon 7 of 8)	exon (NM_178848, exon 7 of 8)	-12865	NM_023554	70078	Mm.439927	NM_023554	ENSMUSG00000063200	Nol7	2210008F15Rik|5730556I21Rik|NOP27|RARG-1	nucleolar protein 7	protein-coding
unique_peak2-36940-1-7--2.62705701021674-1.80617997398389	chr3	104290013	104290448	+	0	NA	intron (NM_001025067, intron 8 of 17)	RMER12|LTR|ERVK	25549	NM_001025067	269473	Mm.34855	NM_001025067	ENSMUSG00000032913	Lrig2	4632419I10Rik|BB096938	leucine-rich repeats and immunoglobulin-like domains 2	protein-coding
common_peak1-17701-42-32-0.69793520850873-1.53680515249685	chr7	73607165	73608481	+	0	NA	Intergenic	Intergenic	-35460	NM_053080	56847	Mm.140988	NM_053080	ENSMUSG00000015134	Aldh1a3	ALDH6|RALDH3|V1	aldehyde dehydrogenase family 1, subfamily A3	protein-coding
common_peak2-24399-34-79--0.939859567886097-2.79764007137193	chr17	13760414	13761998	+	0	NA	Intergenic	Intergenic	-14246	NR_045437	72578	Mm.46549	NR_045436	ENSMUSG00000038347	2700054A10Rik	-	RIKEN cDNA 2700054A10 gene	ncRNA
unique_peak2-34886-2-6--1.72480917832092-1.26211192963361	chr15	80023158	80023416	+	0	NA	intron (NM_010795, intron 1 of 1)	intron (NM_010795, intron 1 of 1)	19136	NM_010795	17309	Mm.299693	NM_010795	ENSMUSG00000042428	Mgat3	1110038J12Rik|AI848272|GnT-III	mannoside acetylglucosaminyltransferase 3	protein-coding
common_peak2-31717-13-13--0.0288828914198356-0.309074325783021	chr9	3335257	3335922	+	0	NA	intron (NM_026303, intron 1 of 11)	intron (NM_026303, intron 1 of 11)	358	NM_026303	67667	Mm.116968	NM_026303	ENSMUSG00000025899	Alkbh8	4930562C03Rik|8030431D03Rik|9430088N01Rik|Abh8	alkB, alkylation repair homolog 8 (E. coli)	protein-coding
common_peak1-9555-26-15-0.927899092158462-1.40782320807777	chr11	117255220	117256433	+	0	NA	Intergenic	CpG	62199	NM_001113488	53860	Mm.38450	NM_017380	ENSMUSG00000059248	Sept9	MSF1|Msf|PNUTL4|Sint1	septin 9	protein-coding
unique_peak2-39608-4-9--1.34538860874061-1.36011389749466	chr9	82484019	82484502	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-239153	NM_001168240	65099	Mm.41415	NM_022986	ENSMUSG00000032251	Irak1bp1	4921528N06Rik|AI851240|Aabp3|Aip70|Simpl	interleukin-1 receptor-associated kinase 1 binding protein 1	protein-coding
common_peak2-23630-13-9-0.456543935750406-0.53895475198017	chr15	83403703	83404228	+	0	NA	intron (NM_009775, intron 3 of 3)	intron (NM_009775, intron 3 of 3)	9962	NM_009775	12257	Mm.1508	NM_009775	ENSMUSG00000041736	Tspo	Bzrp|IBP|PBR|Tspo1	translocator protein	protein-coding
unique_peak2-34277-4-11--1.6084230145744-1.68134727924692	chr13	68091948	68092551	+	0	NA	Intergenic	B4|SINE|B4	127986	NM_001001185	408058	Mm.177840	NM_001001185	ENSMUSG00000064063	BC048507	-	cDNA sequence BC048507	protein-coding
common_peak2-32124-16-17--0.0516613591742505-0.301029995663984	chr9	105131158	105131869	+	0	NA	intron (NM_172461, intron 13 of 15)	intron (NM_172461, intron 13 of 15)	-84101	NM_028562	73532	Mm.23516	NM_028562	ENSMUSG00000032566	1700080E11Rik	AI429110|Tseg8	RIKEN cDNA 1700080E11 gene	protein-coding
common_peak2-28683-8-6-0.197867495889966-1.03789460276074	chr5	32725404	32725747	+	0	NA	Intergenic	Intergenic	-35768	NM_172707	19046	Mm.241931	NM_172707		Ppp1cb	1200010B19	protein phosphatase 1, catalytic subunit, beta isoform	protein-coding
unique_peak2-36935-6-17--1.60452689106201-1.49151883326343	chr3	103171762	103172167	+	0	NA	Intergenic	ORR1A4|LTR|MaLR	88748	NM_001079830	94093	Mm.195036	NM_053170	ENSMUSG00000033014	Trim33	8030451N04Rik|AI413936|Ecto|Tif1g	tripartite motif-containing 33	protein-coding
common_peak2-22918-37-36-0.316539705856869-0.566504029620424	chr14	45529379	45530811	+	0	NA	Intergenic	Intergenic	50887	NR_045059	73895	Mm.318535	NR_045059		4930431P03Rik	-	RIKEN cDNA 4930431P03 gene	ncRNA
common_peak1-10197-25-36--0.347603460283844-0.465043498729215	chr13	45685270	45686491	+	0	NA	intron (NM_001199304, intron 5 of 6)	intron (NM_001199304, intron 5 of 6)	83042	NM_025508	66355	Mm.290802	NM_025508	ENSMUSG00000000253	Gmpr	2310004P21Rik|AV028449	guanosine monophosphate reductase	protein-coding
common_peak1-14644-151-139-0.822857895055785-7.05856893552684	chr3	57302879	57306861	+	0	NA	intron (NM_133784, intron 3 of 6)	intron (NM_133784, intron 3 of 6)	74928	NM_133784	97064	Mm.405029	NM_133784	ENSMUSG00000027803	Wwtr1	2310058J06Rik|2610021I22Rik|C78399|Taz	WW domain containing transcription regulator 1	protein-coding
common_peak2-30481-28-53--0.701928382342006-1.32032392063167	chr7	51861364	51862315	+	0	NA	intron (NM_001271538, intron 40 of 40)	intron (NM_001271538, intron 40 of 40)	15583	NM_001290682	16504	Mm.40312	NM_008422	ENSMUSG00000062785	Kcnc3	KShIIID|Kcr2-3|Kv3.3	potassium voltage gated channel, Shaw-related subfamily, member 3	protein-coding
unique_peak2-37419-4-5--0.608423014574403-0.909929411522249	chr4	149050114	149050524	+	0	NA	promoter-TSS (NM_001164051)	promoter-TSS (NM_001164051)	-121	NM_001164051	18707	Mm.229108	NM_008840	ENSMUSG00000039936	Pik3cd	2410099E07Rik|2610208K16Rik|AW545373|p110delta	phosphatidylinositol 3-kinase catalytic delta polypeptide	protein-coding
unique_peak2-38722-4-6--0.830815435910851-0.989110657569874	chr7	112203913	112204269	+	0	NA	promoter-TSS (NM_146358)	promoter-TSS (NM_146358)	-671	NM_146358	258355	Mm.377452	NM_146358	ENSMUSG00000073914	Olfr677	MOR32-11	olfactory receptor 677	protein-coding
common_peak1-15874-16-17--0.0516613591742505-0.301029995663984	chr5	5688502	5689287	+	0	NA	intron (NM_028734, intron 1 of 5)	MER5B|DNA|MER1_type	5195	NM_001285471	74051	Mm.274956	NM_028734	ENSMUSG00000015653	Steap2	4921538B17Rik|AI930049|AW045895|IPCA-1|IPCA1|PCANAP1|STAMP1|STMP	six transmembrane epithelial antigen of prostate 2	protein-coding
common_peak2-27738-9-7-0.18961340640422-1.05908390183068	chr3	126609677	126610031	+	0	NA	Intergenic	L1Md_A|LINE|L1	36450	NM_001034168	109676	Mm.220242	NM_178655	ENSMUSG00000032826	Ank2	AI835472|AW491075|Ank-2	ankyrin 2, brain	protein-coding
unique_peak2-39199-3-7--1.41398308995928-1.23214870625617	chr8	104640965	104641322	+	0	NA	Intergenic	Intergenic	667868	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
common_peak1-15818-59-63-0.325364000872578-0.740919593040607	chr5	90930938	90932242	+	0	NA	intron (NM_007423, intron 8 of 14)	intron (NM_007423, intron 8 of 14)	11850	NM_007423	11576	Mm.358570	NM_007423	ENSMUSG00000054932	Afp	-	alpha fetoprotein	protein-coding
common_peak2-28248-12-13--0.158578936969966-0.301029995663979	chr4	124703888	124704521	+	0	NA	Intergenic	Intergenic	-3054	NM_145552	230737	Mm.90760	NM_145552	ENSMUSG00000028869	Gnl2	BC003262|HUMAUANTIG|Ngp-1	guanine nucleotide binding protein-like 2 (nucleolar)	protein-coding
unique_peak2-36449-5-9--1.02630843089322-1.21398586181642	chr2	136919364	136919771	+	0	NA	intron (NM_013822, intron 8 of 25)	intron (NM_013822, intron 8 of 25)	22689	NM_013822	16449	Mm.22398	NM_013822	ENSMUSG00000027276	Jag1	ABE2|Gsfabe2|Htu|Ozz|Ser-1	jagged 1	protein-coding
common_peak1-7447-32-49--0.364764170555064-0.548322060310103	chr1	66862084	66863588	+	0	NA	intron (NM_001122738, intron 1 of 14)	MIR|SINE|MIR	1333	NM_177645	68691	Mm.240912	NM_177645	ENSMUSG00000026004	Kansl1l	1110028C15Rik|1190030G24|AI427598|C430010P07Rik|mKIAA4189	KAT8 regulatory NSL complex subunit 1-like	protein-coding
unique_peak2-37383-4-8--1.19338551529556-1.21878474469819	chr4	139201428	139201858	+	0	NA	intron (NM_175438, intron 14 of 14)	L1MA6|LINE|L1	1686	NR_105987	102465617		NR_105987		Mir7020	mmu-mir-7020	microRNA mir-7020	ncRNA
unique_peak2-32982-2-6--1.72480917832092-1.26211192963361	chr10	59589897	59590281	+	0	NA	TTS (NR_105871)	TTS (NR_105871)	565	NR_105871	102465546		NR_105871		Mir6906	mmu-mir-6906	microRNA mir-6906	ncRNA
common_peak2-29253-15-9-0.690236655668294-0.732381977911291	chr5	140321635	140322035	+	0	NA	Intergenic	Intergenic	-19038	NM_025604	66506	Mm.29070	NM_025604	ENSMUSG00000029551	Psmg3	1810042K04Rik|4930403H09Rik|AI303239	proteasome (prosome, macropain) assembly chaperone 3	protein-coding
unique_peak1-859-13-3-1.77847203063777-2.58603100924543	chr11	20640370	20641006	+	0	NA	intron (NM_001252503, intron 1 of 7)	intron (NM_001252503, intron 1 of 7)	871	NM_001290545	216549	Mm.356580	NM_181411	ENSMUSG00000049659	Aftph	-	aftiphilin	protein-coding
unique_peak2-36359-5-5--0.289342836727009-0.909929411522249	chr2	102878766	102879198	+	0	NA	intron (NM_175094, intron 5 of 10)	intron (NM_175094, intron 5 of 10)	34688	NM_175094	27402	Mm.315011	NM_175094	ENSMUSG00000010914	Pdhx	AI481367|E3bp|Pdx1	pyruvate dehydrogenase complex, component X	protein-coding
common_peak1-14534-39-44-0.123908150589479-0.359431063687663	chr3	30602105	30603236	+	0	NA	Intergenic	Intergenic	-42545	NM_029489	75953	Mm.308084	NM_029489	ENSMUSG00000051860	Samd7	4930597A01Rik	sterile alpha motif domain containing 7	protein-coding
common_peak1-12470-22-11-1.06232160436625-1.51503956548638	chr17	84107874	84108777	+	0	NA	intron (NM_001171053, intron 2 of 13)	intron (NM_001171053, intron 2 of 13)	2822	NM_001171052	116871	Mm.277668	NM_054082	ENSMUSG00000055817	Mta3	1110002J22Rik|mKIAA1266	metastasis associated 3	protein-coding
common_peak2-19897-42-29-0.835438732258665-1.96184293807029	chr1	106406955	106408046	+	0	NA	Intergenic	L1_Mm|LINE|L1	-257896	NM_011800	23836	Mm.103640	NM_011800	ENSMUSG00000050840	Cdh20	Cdh7	cadherin 20	protein-coding
common_peak2-27899-21-29--0.337401330342283-0.403610417161439	chr4	150371447	150372442	+	0	NA	intron (NM_011910, intron 1 of 3)	intron (NM_011910, intron 1 of 3)	738	NM_011910	24111	Mm.89984	NM_011910	ENSMUSG00000028963	Uts2	UII|Ucn2|prepro-UII	urotensin 2	protein-coding
unique_peak1-2759-8-1-2.00522241794757-2.05605744720049	chr17	5085024	5085546	+	0	NA	intron (NM_001085355, intron 2 of 19)	B1F2|SINE|Alu	90211	NM_001085355	239985	Mm.133401	NM_001085355	ENSMUSG00000069729	Arid1b	8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235	AT rich interactive domain 1B (SWI-like)	protein-coding
common_peak2-25207-11-14--0.398197011356905-0.379391706698377	chr18	60731735	60732438	+	0	NA	3' UTR (NM_025776, exon 11 of 11)	3' UTR (NM_025776, exon 11 of 11)	11646	NM_025776	66810	Mm.275106	NM_025776	ENSMUSG00000024604	Rbm22	8430430L24Rik	RNA binding motif protein 22	protein-coding
common_peak1-18681-54-80--0.16676424125489-0.392502671390497	chr8	119670364	119671860	+	0	NA	Intergenic	Intergenic	-10923	NM_001081151	209239	Mm.132992	NM_001081151	ENSMUSG00000052557	Gan	A330045G18|gigaxonin	giant axonal neuropathy	protein-coding
common_peak2-22470-16-18--0.129663871175524-0.307235046933848	chr13	47170874	47171629	+	0	NA	intron (NM_172262, intron 16 of 20)	intron (NM_172262, intron 16 of 20)	30338	NM_025900	110052	Mm.131150	NM_025900	ENSMUSG00000021377	Dek	1810019E15Rik|D13H6S231E	DEK oncogene (DNA binding)	protein-coding
common_peak1-15752-34-36-0.172615161372316-0.401350871931209	chr4	150236146	150237359	+	0	NA	intron (NM_133753, intron 1 of 3)	intron (NM_133753, intron 1 of 3)	7552	NM_133753	74155	Mm.318841	NM_133753	ENSMUSG00000028967	Errfi1	1300002F13Rik|AI788755|Mig-6|Mig6|RALT	ERBB receptor feedback inhibitor 1	protein-coding
unique_peak1-5853-7-1-1.79909083029819-1.80617997398389	chr6	83116226	83116659	+	0	NA	intron (NM_001198866, intron 1 of 31)	intron (NM_001198866, intron 1 of 31)	524	NM_001198867	13191	Mm.6919	NM_007835	ENSMUSG00000031865	Dctn1	AL022633|Glued|p150|p150<glued>	dynactin 1	protein-coding
unique_peak2-38195-2-5--1.50241675698448-1.08602067057793	chr6	105022618	105022879	+	0	NA	Intergenic	L1Md_A|LINE|L1	419914	NR_040297	100503536	Mm.366960	NR_040297		Gm19757	-	predicted gene, 19757	ncRNA
common_peak2-28364-9-6-0.382258484346616-1.11707584880836	chr4	137048298	137048728	+	0	NA	intron (NM_008305, intron 1 of 96)	intron (NM_008305, intron 1 of 96)	23795	NM_008305	15530	Mm.273662	NM_008305	ENSMUSG00000028763	Hspg2	AI852380|Pcn|Plc|per	perlecan (heparan sulfate proteoglycan 2)	protein-coding
common_peak2-28410-57-69-0.136750023133962-0.396265517229168	chr4	141301190	141303159	+	0	NA	promoter-TSS (NM_001081408)	promoter-TSS (NM_001081408)	-416	NM_001081408	75986	Mm.30032	NM_001081408	ENSMUSG00000040706	Agmat	5033405N08Rik	agmatine ureohydrolase (agmatinase)	protein-coding
common_peak2-28599-16-8-0.948338640825749-1.02063122982878	chr5	21736980	21737492	+	0	NA	intron (NM_011261, intron 2 of 63)	intron (NM_011261, intron 2 of 63)	113287	NM_011261	19699	Mm.425236	NM_011261	ENSMUSG00000042453	Reln	reeler|rl	reelin	protein-coding
unique_peak2-35928-8-10--0.454209200689727-1.078512453669	chr19	6941782	6942267	+	0	NA	Intergenic	RMER16-int|LTR|ERVK	-9323	NM_001081291	78317	Mm.329596	NM_198008	ENSMUSG00000047810	Ccdc88b	2610041P08Rik|Ccdc88	coiled-coil domain containing 88B	protein-coding
unique_peak2-37154-3-6--1.22133801201688-1.08602067057793	chr4	40847673	40848121	+	0	NA	Intergenic	Intergenic	-19192	NM_011463	20731	Mm.25246	NM_011463	ENSMUSG00000028415	Spink4	MPGC60	serine peptidase inhibitor, Kazal type 4	protein-coding
unique_peak2-33256-2-7--1.91745425626332-1.45399745587252	chr10	128096942	128097341	+	0	NA	Intergenic	Intergenic	13833	NM_173733	211389	Mm.23352	NM_173733	ENSMUSG00000049858	Suox	SO	sulfite oxidase	protein-coding
common_peak1-15236-19-19-0.0807592317743238-0.322753776620787	chr4	6452055	6453066	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-71142	NM_010945	18201	Mm.3059	NM_010945	ENSMUSG00000028245	Nsmaf	AA959567|C630007J05|Fan	neutral sphingomyelinase (N-SMase) activation associated factor	protein-coding
common_peak1-17201-42-61--0.211866982519691-0.393610822453566	chr6	124964651	124965970	+	0	NA	intron (NM_175557, intron 2 of 10)	MERVL_2A-int|LTR|ERVL	5623	NM_175557	269800	Mm.108677	NM_175557	ENSMUSG00000038346	Zfp384	BB163993|C130073D16Rik|Ciz|NP|Nmp4	zinc finger protein 384	protein-coding
unique_peak2-37522-8-7-0.00522241794757061-1.00793137938329	chr5	21784751	21785189	+	0	NA	intron (NM_011261, intron 2 of 63)	intron (NM_011261, intron 2 of 63)	65553	NM_011261	19699	Mm.425236	NM_011261	ENSMUSG00000042453	Reln	reeler|rl	reelin	protein-coding
unique_peak2-34992-4-6--0.830815435910851-0.989110657569874	chr15	99553315	99553834	+	0	NA	intron (NM_010271, intron 7 of 7)	intron (NM_010271, intron 7 of 7)	-2475	NM_183256	66379	Mm.5265	NM_183256	ENSMUSG00000023020	Cox14	2310016M24Rik|AA959804	cytochrome c oxidase assembly protein 14	protein-coding
unique_peak1-2117-57-9-2.94410494519157-13.6707112390546	chr15	41724479	41726612	+	0	NA	Intergenic	MERVL-int|LTR|ERVL	-24279	NM_175456	223513	Mm.148913	NM_175456	ENSMUSG00000042895	Abra	C130068O12Rik|STARS	actin-binding Rho activating protein	protein-coding
common_peak2-30801-27-23-0.40658345017408-0.622271369641148	chr7	127470001	127471261	+	0	NA	Intergenic	Intergenic	-1567	NM_177213	320631	Mm.78330	NM_177213	ENSMUSG00000054746	Abca15	4930500I12Rik	ATP-binding cassette, sub-family A (ABC1), member 15	protein-coding
unique_peak1-7313-13-7-0.778472030637769-0.817533494790411	chr9	119341382	119341956	+	0	NA	exon (NM_007397, exon 8 of 10)	exon (NM_007397, exon 8 of 10)	-12372	NM_001172136	208194	Mm.101578	NM_172456	ENSMUSG00000042787	Exog	AW557704|ENGL-B|ENGL-a|Endogl1|Endogl2|Engl|Engla|Englb	endo/exonuclease (5'-3'), endonuclease G-like	protein-coding
common_peak2-28836-9-14--0.717277189204299-0.53895475198017	chr5	66618143	66618849	+	0	NA	Intergenic	Intergenic	-32868	NM_027602	70918	Mm.23166	NM_027602	ENSMUSG00000029206	Nsun7	4921525L17Rik	NOL1/NOP2/Sun domain family, member 7	protein-coding
common_peak1-16098-36-29-0.572430490559236-1.05820747366651	chr5	64812272	64813378	+	0	NA	Intergenic	Intergenic	46356	NR_040681	69999	Mm.261413	NR_040681		1700027F09Rik	-	RIKEN cDNA 1700027F09 gene	ncRNA
common_peak1-11339-11-4-1.18676548936425-1.68134727924692	chr15	86202507	86203031	+	0	NA	intron (NM_145476, intron 10 of 12)	intron (NM_145476, intron 10 of 12)	157880	NM_145476	223754	Mm.28904	NM_145476	ENSMUSG00000051864	Tbc1d22a	BC023106|D15Ertd781e	TBC1 domain family, member 22a	protein-coding
common_peak2-31704-32-42--0.147172735482438-0.325162986021101	chr9	72531960	72533038	+	0	NA	intron (NM_010890, intron 5 of 28)	intron (NM_010890, intron 5 of 28)	22345	NM_010890	17999	Mm.279923	NM_010890	ENSMUSG00000032216	Nedd4	AA959633|AL023035|AU019897|E430025J12Rik|Nedd4-1|Nedd4a|mKIAA0093	neural precursor cell expressed, developmentally down-regulated 4	protein-coding
unique_peak1-1193-10-2-1.77145284428761-2.09384600808989	chr11	102633449	102633967	+	0	NA	intron (NM_001110778, intron 8 of 25)	intron (NM_001110778, intron 8 of 25)	10955	NM_001110778	11488	Mm.89854	NM_009613	ENSMUSG00000020926	Adam11	AW060611|Mdc	a disintegrin and metallopeptidase domain 11	protein-coding
unique_peak2-38242-7-14--1.10779976531033-0.817533494790411	chr6	121063614	121064489	+	0	NA	intron (NM_001270475, intron 1 of 31)	B1_Mus2|SINE|Alu	16989	NM_001270475	194401	Mm.122399	NM_153396	ENSMUSG00000003178	Mical3	C130040D16Rik|Mical-3|mKIAA1364	microtubule associated monooxygenase, calponin and LIM domain containing 3	protein-coding
unique_peak2-36048-8-16--1.08224042330277-0.891319708951328	chr19	46396798	46397509	+	0	NA	intron (NM_028627, intron 5 of 17)	intron (NM_028627, intron 5 of 17)	4493	NM_028627	73728	Mm.268532	NM_028627	ENSMUSG00000037126	Psd	1110007H17Rik|A930015K15|Efa6|Efa6a|Psdl|mKIAA2011	pleckstrin and Sec7 domain containing	protein-coding
unique_peak1-2187-7-3-0.799090830298189-1.23214870625617	chr15	64023960	64024358	+	0	NA	intron (NM_001276467, intron 4 of 29)	L2|LINE|L2	120076	NM_001276462	13196	Mm.277236	NM_010026	ENSMUSG00000022377	Asap1	AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19	ArfGAP with SH3 domain, ankyrin repeat and PH domain1	protein-coding
unique_peak2-34390-10-13--0.450939577048835-0.386243247519795	chr14	21806969	21807602	+	0	NA	intron (NM_009502, intron 6 of 20)	intron (NM_009502, intron 6 of 20)	58630	NM_009502	22330	Mm.279361	NM_009502	ENSMUSG00000021823	Vcl	9430097D22|AA571387|AI462105|AW545629	vinculin	protein-coding
unique_peak2-34359-5-4--0.0263084308932156-0.909929411522249	chr13	104014876	104015253	+	0	NA	intron (NM_175171, intron 1 of 28)	RMER17C|LTR|ERVK	109508	NM_175171	328329	Mm.202606	NM_175171	ENSMUSG00000034751	Mast4	4930420O11Rik|AI642422|mKIAA0303	microtubule associated serine/threonine kinase family member 4	protein-coding
common_peak2-23165-20-13-0.680719862533589-0.809260849721102	chr14	122105107	122105767	+	0	NA	intron (NM_134074, intron 1 of 52)	B1_Mur4|SINE|Alu	-7798	NM_001081039	105445	Mm.441054	NM_134074	ENSMUSG00000025558	Dock9	AA959601|AW538057|B230309H04Rik|D14Wsu89e|Zizimin1|mKIAA1058	dedicator of cytokinesis 9	protein-coding
unique_peak2-33420-1-5--2.2120195109379-1.32905871926422	chr11	59732273	59732612	+	0	NA	Intergenic	(CAAAC)n|Simple_repeat|Simple_repeat	29207	NR_045273	100504121	Mm.383770	NR_045273	ENSMUSG00000085260	Med9os	1700013G23Rik	mediator complex subunit 9, opposite strand	ncRNA
common_peak1-13448-132-144-0.53853910206793-3.06341005134807	chr19	56547509	56549899	+	0	NA	exon (NM_001164263, exon 7 of 13)	exon (NM_001164263, exon 7 of 13)	12577	NM_172641	226245	Mm.156742	NM_172641	ENSMUSG00000035818	Plekhs1	9930023K05Rik	pleckstrin homology domain containing, family S member 1	protein-coding
unique_peak1-534-8-2-1.42025991722641-1.65811743852845	chr1	187031956	187032470	+	0	NA	intron (NM_001163754, intron 1 of 34)	intron (NM_001163754, intron 1 of 34)	4166	NM_001163754	98732	Mm.275841	NM_172649	ENSMUSG00000039318	Rab3gap2	1110059F07Rik|2010002H18Rik|5830469C09|AI851069|AW743433|RAB3-GAP150|mKIAA0839	RAB3 GTPase activating protein subunit 2	protein-coding
common_peak1-17837-22-35--0.522640896354908-0.664636481544818	chr7	110164277	110164975	+	0	NA	Intergenic	Intergenic	-25369	NM_147053	259055	Mm.377812	NM_147053	ENSMUSG00000073961	Olfr582	MOR30-3	olfactory receptor 582	protein-coding
common_peak2-31539-28-47--0.532003380899694-0.835790028376013	chr8	111258362	111259528	+	0	NA	intron (NM_007496, intron 1 of 9)	intron (NM_007496, intron 1 of 9)	20401	NM_007496	11906	Mm.416972	NM_007496	ENSMUSG00000038872	Zfhx3	A230102L03Rik|Atbf1|WBP9|mKIAA4228	zinc finger homeobox 3	protein-coding
unique_peak1-6509-19-1-3.40268732666169-5.15699611159533	chr7	116824436	116825254	+	0	NA	Intergenic	MTC|LTR|MaLR	-22406	NM_020616	57373	Mm.334138	NM_020616	ENSMUSG00000031023	Akip1	BCA3|C11orf17|D7H11orf17|D930014E17Rik|ICRFP703B1614Q5.6|ORF27	A kinase (PRKA) interacting protein 1	protein-coding
common_peak1-15067-21-12-0.869049547125143-1.18646456559501	chr3	126560247	126561282	+	0	NA	Intergenic	L1_Mur3|LINE|L1	85540	NM_001034168	109676	Mm.220242	NM_178655	ENSMUSG00000032826	Ank2	AI835472|AW491075|Ank-2	ankyrin 2, brain	protein-coding
common_peak2-27185-14-15--0.100783839642355-0.301029995663982	chr3	36475881	36476555	+	0	NA	intron (NM_027810, intron 15 of 18)	B2_Mm1a|SINE|B2	-5300	NM_009828	12428	Mm.4189	NM_009828	ENSMUSG00000027715	Ccna2	AA408589|Ccn-1|Ccn1|Ccna|CycA2|Cyca	cyclin A2	protein-coding
common_peak2-28515-15-12-0.311725032414564-0.425539671739611	chr5	86064841	86065508	+	0	NA	Intergenic	Intergenic	429434	NM_007683	12617	Mm.4649	NM_007683	ENSMUSG00000029253	Cenpc1	CENP-C|Cenpc	centromere protein C1	protein-coding
unique_peak1-1243-7-0-2.79909083029819-2.40823996531185	chr11	114677221	114677689	+	0	NA	Intergenic	B1F1|SINE|Alu	17217	NM_181749	217302	Mm.269127	NM_181749	ENSMUSG00000034677	Gpr142	PGR2	G protein-coupled receptor 142	protein-coding
common_peak2-31363-13-14--0.12841856497075-0.301029995663977	chr8	84856973	84857519	+	0	NA	intron (NM_008357, intron 7 of 7)	intron (NM_008357, intron 7 of 7)	69239	NM_001254747	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
unique_peak2-37680-1-5--2.2120195109379-1.32905871926422	chr5	96803720	96804153	+	0	NA	intron (NM_175473, intron 1 of 73)	intron (NM_175473, intron 1 of 73)	962	NM_175473	231470	Mm.291120	NM_175473	ENSMUSG00000034687	Fras1	E130113P14Rik|bl|mKIAA1500	Fraser syndrome 1 homolog (human)	protein-coding
unique_peak1-6617-26-3-2.92789909215846-5.86906124235393	chr8	4404351	4405261	+	0	NA	Intergenic	Intergenic	55218	NM_009138	20300	Mm.7275	NM_009138	ENSMUSG00000023235	Ccl25	A130072A22Rik|AI852536|CKb15|Scya25|TECK	chemokine (C-C motif) ligand 25	protein-coding
common_peak2-25697-11-12--0.191746133889479-0.310474156842889	chr19	18630107	18630778	+	0	NA	Intergenic	MTD|LTR|MaLR	75861	NM_017375	20409	Mm.172222	NM_017375		Ostf1	C78236|SH3P2|Sh3d3	osteoclast stimulating factor 1	protein-coding
common_peak2-25546-18-8-1.14299414978604-1.45476480588849	chr19	6084392	6084994	+	0	NA	promoter-TSS (NM_026410)	promoter-TSS (NM_026410)	198	NM_024231	81909	Mm.289471	NM_024231	ENSMUSG00000024792	Zfpl1	1500015B20Rik	zinc finger like protein 1	protein-coding
unique_peak1-1175-13-1-2.77847203063777-3.64038867156802	chr11	100149719	100150247	+	0	NA	Intergenic	Intergenic	-18798	NM_212483	68239	Mm.158190	NM_212483	ENSMUSG00000053654	Krt42	2410039E07Rik|K17n|Ka22|ecat6	keratin 42	protein-coding
unique_peak2-37856-8-19--1.31670567693979-1.30305656033811	chr5	135994832	135995325	+	0	NA	intron (NM_146001, intron 1 of 30)	RSINE1|SINE|B4	25914	NM_146001	215114	Mm.280805	NM_146001	ENSMUSG00000039959	Hip1	2610109B09Rik|A930014B11Rik|E130315I21Rik|mKIAA4113	huntingtin interacting protein 1	protein-coding
unique_peak2-37789-0-7--3.84013093047421-1.80617997398389	chr5	121593555	121593963	+	0	NA	intron (NM_011202, intron 11 of 15)	intron (NM_011202, intron 11 of 15)	47647	NM_001109992	19247	Mm.8681	NM_011202	ENSMUSG00000043733	Ptpn11	2700084A17Rik|AW536184|PTP1D|PTP2C|SAP-2|SH-PTP2|SH-PTP3|SHP-2|Shp2|Syp	protein tyrosine phosphatase, non-receptor type 11	protein-coding
unique_peak2-33712-3-5--0.998945590680433-0.96108193396963	chr11	113144106	113144451	+	0	NA	intron (NM_027216, intron 7 of 9)	B3A|SINE|B2	-73295	NR_040276	319871	Mm.383743	NR_040276	ENSMUSG00000085421	4732490B19Rik	-	RIKEN cDNA 4732490B19 gene	ncRNA
common_peak1-12237-9-16--0.897849434846119-0.732381977911291	chr17	35263090	35263658	+	0	NA	promoter-TSS (NM_033477)	promoter-TSS (NM_033477)	27	NM_033477	114585	Mm.42070	NM_033477	ENSMUSG00000043311	D17H6S53E	G4|NG34	DNA segment, Chr 17, human D6S53E	protein-coding
unique_peak2-36944-0-6--3.64748585253182-1.56314192529759	chr3	105585673	105586105	+	0	NA	intron (NM_145541, intron 1 of 7)	intron (NM_145541, intron 1 of 7)	18410	NM_145541	109905	Mm.101922	NM_145541	ENSMUSG00000068798	Rap1a	AI848598|G-22K|Krev-1|Rap1	RAS-related protein-1a	protein-coding
common_peak2-25307-25-53--0.893037596818362-1.84891677255723	chr18	74216023	74216924	+	0	NA	intron (NM_172632, intron 1 of 5)	intron (NM_172632, intron 1 of 5)	8130	NM_172632	225724	Mm.254517	NM_172632	ENSMUSG00000024558	Mapk4	A330097D03Rik|Erk3|Prkm4|p63Mapk	mitogen-activated protein kinase 4	protein-coding
unique_peak2-37215-5-7--0.704380336005853-1.01466476204226	chr4	83378283	83378772	+	0	NA	intron (NM_001081012, intron 21 of 25)	intron (NM_001081012, intron 21 of 25)	207078	NM_001081012	320226	Mm.180032	NM_029117	ENSMUSG00000052407	Ccdc171	4930418J05Rik|4930473A06Rik|A330015D16Rik	coiled-coil domain containing 171	protein-coding
unique_peak1-4726-15-1-3.01216475055566-4.18809100057339	chr3	106488454	106489316	+	0	NA	intron (NM_001039478, intron 1 of 2)	intron (NM_001039478, intron 1 of 2)	980	NM_001039478	321000	Mm.259638	NM_028081	ENSMUSG00000056260	Lrif1	2010012G17Rik|4933421E11Rik|AI450568	ligand dependent nuclear receptor interacting factor 1	protein-coding
unique_peak2-36912-6-5--0.0195643903408542-0.947717972411649	chr3	98027179	98027590	+	0	NA	intron (NM_026328, intron 1 of 5)	intron (NM_026328, intron 1 of 5)	1305	NM_026328	67709	Mm.46306	NM_026328	ENSMUSG00000027876	Reg4	2010002L15Rik|GISP|RELP	regenerating islet-derived family, member 4	protein-coding
common_peak1-8882-43-54-0.0012034719990428-0.303022200133692	chr11	45851821	45852963	+	0	NA	Intergenic	Intergenic	-15612	NM_001291890	11492	Mm.89940	NM_009616	ENSMUSG00000011256	Adam19	AL024287|Mltnb	a disintegrin and metallopeptidase domain 19 (meltrin beta)	protein-coding
unique_peak1-7031-11-1-2.50869358425161-2.83420869758413	chr8	126771288	126771813	+	0	NA	intron (NM_139272, intron 1 of 15)	MTD|LTR|MaLR	16256	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
common_peak2-20550-51-121--0.855813511960314-3.71703510816648	chr10	69212102	69213908	+	0	NA	intron (NM_170730, intron 1 of 17)	RSINE1|SINE|B4	-175275	NM_170687	11735	Mm.235960	NM_009670	ENSMUSG00000069601	Ank3	2900054D09Rik|AI314020|Ank-3|AnkG|Ankyrin-3|Ankyrin-G	ankyrin 3, epithelial	protein-coding
unique_peak2-36661-4-12--1.72390023199434-1.85743853830261	chr3	22091164	22091728	+	0	NA	intron (NM_030732, intron 9 of 15)	intron (NM_030732, intron 9 of 15)	-58846	NR_004439	19784		NR_004439		Rprl2	RPRH3|Rmrp3	ribonuclease P RNA-like 2	ncRNA
common_peak2-29338-41-77--0.584253514013588-1.35978651500511	chr5	148551337	148553032	+	0	NA	Intergenic	ID_B1|SINE|B4	-14620	NM_010228	14254	Mm.389712	NM_010228	ENSMUSG00000029648	Flt1	AI323757|Flt-1|VEGFR-1|VEGFR1|sFlt1	FMS-like tyrosine kinase 1	protein-coding
unique_peak1-3316-11-2-1.92373108353046-2.32232533660526	chr18	79899266	79899767	+	0	NA	Intergenic	L1_Mur2|LINE|L1	-344118	NM_053117	93737	Mm.24678	NM_053117	ENSMUSG00000056214	Pard6g	2410049N21Rik|Par6a	par-6 family cell polarity regulator gamma	protein-coding
common_peak2-25122-6-9--0.75652998450706-1.11707584880836	chr18	38856362	38856828	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-95673	NM_011898	24066	Mm.42038	NM_011898	ENSMUSG00000024427	Spry4	A030006O18Rik|sprouty4	sprouty homolog 4 (Drosophila)	protein-coding
common_peak2-24590-10-11--0.228547155712387-0.31137425193576	chr17	31897337	31897799	+	0	NA	Intergenic	Intergenic	82692	NM_001278570	12954	Mm.1228	NM_013501	ENSMUSG00000024041	Cryaa	Acry-1|Crya-1|Crya1|DAcry-1|lop18	crystallin, alpha A	protein-coding
common_peak1-10871-35-11-1.84640775774135-4.70184985774135	chr15	36847484	36848590	+	0	NA	Intergenic	Intergenic	89120	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
common_peak1-17302-24-10-1.33377828413042-2.22881803703862	chr6	137568235	137569086	+	0	NA	intron (NM_007945, intron 1 of 21)	L1Md_T|LINE|L1	29146	NM_001271588	13860	Mm.235346	NM_007945	ENSMUSG00000015766	Eps8	AW261790	epidermal growth factor receptor pathway substrate 8	protein-coding
common_peak1-7570-58-78--0.00783081328660629-0.302413108461692	chr1	43932993	43934652	+	0	NA	Intergenic	Intergenic	-49269	NM_026430	67883	Mm.387202	NM_026430		Uxs1	1600025I13Rik|AI451869|AI649125|AW550562	UDP-glucuronate decarboxylase 1	protein-coding
common_peak2-20969-22-41--0.745033317691356-1.15174830603352	chr11	20531726	20532827	+	0	NA	5' UTR (NM_001038625, exon 1 of 2)	5' UTR (NM_001038625, exon 1 of 2)	296	NM_001038625	58172	Mm.339676	NM_021372	ENSMUSG00000049800	Sertad2	AB041541|AU021878|Kiaa0127|SEI-2|Sei2|TRIP-Br2|mKIAA0127	SERTA domain containing 2	protein-coding
common_peak2-28503-19-36--0.806766038967264-1.16836819221353	chr5	8798024	8799033	+	0	NA	intron (NM_011075, intron 1 of 27)	CpG	381	NM_011075	18669	Mm.146649	NM_011075	ENSMUSG00000028970	Abcb1b	Abcb1|Mdr1|Mdr1b|Pgy-1|Pgy1|mdr	ATP-binding cassette, sub-family B (MDR/TAP), member 1B	protein-coding
common_peak1-13445-9-11--0.395349094316936-0.344532117358383	chr19	55874485	55874972	+	0	NA	intron (NM_001142920, intron 4 of 11)	intron (NM_001142920, intron 4 of 11)	58428	NM_001142923	21416	Mm.139815	NM_009333	ENSMUSG00000024985	Tcf7l2	TCF4B|TCF4E|Tcf-4|Tcf4|mTcf-4B|mTcf-4E	transcription factor 7 like 2, T cell specific, HMG box	protein-coding
common_peak2-31249-16-11-0.533301141546906-0.58239619684445	chr8	70634266	70634818	+	0	NA	Intergenic	Intergenic	-136069	NM_177698	234353	Mm.32525	NM_027626	ENSMUSG00000030465	Psd3	4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D	pleckstrin and Sec7 domain containing 3	protein-coding
common_peak2-20750-44-37-0.57396532112495-1.23216191351736	chr10	111575173	111576058	+	0	NA	Intergenic	Intergenic	-27117	NM_178278	353025	Mm.194428	NM_178278	ENSMUSG00000035694	Caps2	D630005B03Rik	calcyphosphine 2	protein-coding
unique_peak2-37391-6-8--0.60452689106201-1.03789460276074	chr4	140701723	140702127	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-1912	NM_172518	213499	Mm.28865	NM_172518	ENSMUSG00000028920	Fbxo42	6720460I06Rik|mKIAA1332	F-box protein 42	protein-coding
unique_peak1-1496-9-2-1.60465090568306-1.87199725847353	chr13	89636718	89637243	+	0	NA	Intergenic	Intergenic	-43261	NM_013500	12950	Mm.266790	NM_013500	ENSMUSG00000021613	Hapln1	BB099155|CLP|Crtl1|Crtl1l|LP|LP-1	hyaluronan and proteoglycan link protein 1	protein-coding
common_peak2-28587-11-5-0.923731083530457-1.477227296591	chr5	17505716	17506266	+	0	NA	intron (NM_001081143, intron 4 of 7)	intron (NM_001081143, intron 4 of 7)	37603	NM_001081143	242851	Mm.332230	NM_001081143	ENSMUSG00000028777	Gnat3	Ggust|Gtn	guanine nucleotide binding protein, alpha transducing 3	protein-coding
common_peak2-22937-9-6-0.382258484346616-1.11707584880836	chr14	47370817	47371132	+	0	NA	Intergenic	L1Md_T|LINE|L1	-9242	NM_028222	72391	Mm.272394	NM_028222	ENSMUSG00000037628	Cdkn3	2410006H10Rik|KAP	cyclin-dependent kinase inhibitor 3	protein-coding
common_peak1-10075-10-16--0.73104749624157-0.604422558181019	chr13	23542817	23543223	+	0	NA	Intergenic	Intergenic	14750	NM_013483	12231	Mm.1420	NM_013483	ENSMUSG00000000706	Btn1a1	Btn	butyrophilin, subfamily 1, member A1	protein-coding
unique_peak1-2165-14-8-0.729291158915332-0.771068449301682	chr15	60779238	60780092	+	0	NA	Intergenic	Intergenic	-26840	NM_001081067	117586	Mm.291499	NM_001081067	ENSMUSG00000022347	A1bg	C44	alpha-1-B glycoprotein	protein-coding
common_peak1-12239-11-6-0.701338662194009-1.32595962126035	chr17	35551213	35551730	+	0	NA	Intergenic	MERVL_2A-int|LTR|ERVL	-10321	NM_023124	15019	Mm.486287	NM_023124		H2-Q8	H-2Q8|MMS10-T|Ms10t|Qa-2|Qa-8|Qa8	histocompatibility 2, Q region locus 8	protein-coding
common_peak2-30681-19-26--0.352200175501782-0.416752705545949	chr7	105810516	105811032	+	0	NA	Intergenic	B1F|SINE|Alu	-5695	NM_172280	233545	Mm.387819	NM_172280	ENSMUSG00000035401	2210018M11Rik	2310016L09Rik|AU019521|AU019557|Emsy	RIKEN cDNA 2210018M11 gene	protein-coding
unique_peak2-35470-3-9--1.73591118484664-1.57096726280955	chr17	43666654	43667119	+	0	NA	Intergenic	Intergenic	13702	NM_001254953	100043332	Mm.17626	NM_001254953	ENSMUSG00000096140	Ankrd66	AU041848|D730048J04Rik|Gm4368	ankyrin repeat domain 66	protein-coding
common_peak1-13080-12-11-0.0638134843664826-0.337263207250336	chr19	6877168	6877680	+	0	NA	Intergenic	Intergenic	27010	NR_039555	100628576		NR_039555		Mir5046	mmu-mir-5046|mu-mir-5046	microRNA 5046	ncRNA
unique_peak1-5022-10-0-3.35641534500877-3.31132995230379	chr4	129584694	129585217	+	0	NA	intron (NR_045190, intron 1 of 2)	B1F|SINE|Alu	1485	NR_045190	319894	Mm.59196	NR_045190	ENSMUSG00000086369	E330017L17Rik	-	RIKEN cDNA E330017L17 gene	ncRNA
common_peak1-16923-14-8-0.729291158915332-0.771068449301682	chr6	82753038	82753705	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	-28923	NM_013820	15277	Mm.255848	NM_013820	ENSMUSG00000000628	Hk2	AI642394|HKII	hexokinase 2	protein-coding
common_peak1-17356-34-36-0.172615161372316-0.401350871931209	chr7	19561660	19562742	+	0	NA	Intergenic	ID4|SINE|ID	-10672	NM_194064	378430	Mm.277153	NM_194064	ENSMUSG00000051965	Nanos2	nos2	nanos homolog 2 (Drosophila)	protein-coding
common_peak1-12644-14-34--1.23006685658732-1.94354392707378	chr18	35498344	35499108	+	0	NA	intron (NM_030749, intron 5 of 9)	intron (NM_030749, intron 5 of 9)	-124048	NM_178005	107065	Mm.39900	NM_178005	ENSMUSG00000071862	Lrrtm2	AI851755|BB129880|C630011A14Rik|mKIAA0416	leucine rich repeat transmembrane neuronal 2	protein-coding
unique_peak1-3792-20-5-1.90311228387004-2.81016724606745	chr19	57079123	57080348	+	0	NA	intron (NM_001177796, intron 1 of 19)	intron (NM_001177796, intron 1 of 19)	3330	NM_146102	226250	Mm.226284	NM_146102	ENSMUSG00000025083	Afap1l2	AU041783|C86904|mKIAA1914	actin filament associated protein 1-like 2	protein-coding
common_peak2-31616-78-121--0.123916243402352-0.376537733660042	chr8	123041203	123042418	+	0	NA	intron (NM_198671, intron 1 of 15)	intron (NM_198671, intron 1 of 15)	-17947	NM_001145897	382034	Mm.334856	NM_198671	ENSMUSG00000031822	Gse1	2210013I18Rik|mKIAA0182	genetic suppressor element 1	protein-coding
unique_peak1-504-15-3-2.01216475055566-3.03427613622886	chr1	181011204	181011823	+	0	NA	intron (NM_027188, intron 8 of 11)	intron (NM_027188, intron 8 of 11)	436621	NM_027188	69726	Mm.222338	NM_027188		Smyd3	2410008A19Rik|Zmynd1	SET and MYND domain containing 3	protein-coding
common_peak2-22058-27-49--0.652310238879489-1.08158034290998	chr12	70825497	70826396	+	0	NA	promoter-TSS (NM_026536)	promoter-TSS (NM_026536)	-3	NM_026536	68055	Mm.27844	NM_026536	ENSMUSG00000054894	Atp5s	1110015E18Rik|ATPW	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit S	protein-coding
common_peak2-22022-39-53--0.139126255244315-0.335101043913478	chr12	59060928	59061734	+	0	NA	Intergenic	Intergenic	-251460	NM_009216	20605	Mm.278336	NM_009216		Sstr1	SRIF-2|SS-1-R|SS1-R|SS1R|Smstr-1|Smstr1|sst1	somatostatin receptor 1	protein-coding
unique_peak2-37043-7-7--0.200909169701811-0.97990265578305	chr3	133211695	133212127	+	0	NA	Intergenic	Intergenic	-4557	NM_001040400	214133	Mm.347816	NM_145989	ENSMUSG00000040943	Tet2	Ayu17-449|E130014J05Rik|mKIAA1546	tet methylcytosine dioxygenase 2	protein-coding
unique_peak1-5189-12-2-2.06381348436648-2.79529063155376	chr5	32052120	32052668	+	0	NA	intron (NM_181282, intron 3 of 11)	intron (NM_181282, intron 3 of 11)	51971	NM_181282	107976	Mm.482126	NM_144541	ENSMUSG00000052139	Bre	6030405P19Rik|AI429776|B830038C02Rik	brain and reproductive organ-expressed protein	protein-coding
common_peak2-29426-29-56--0.72059993354963-1.36290396447365	chr6	7844747	7845509	+	0	NA	Intergenic	Intergenic	49904	NM_052993	94192	Mm.102752	NM_052993	ENSMUSG00000042460	C1galt1	2210410E06Rik|AV284120|T-synthase	core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1	protein-coding
common_peak1-9292-22-12-0.946844386946312-1.31435121412491	chr11	88612008	88613195	+	0	NA	Intergenic	Intergenic	32644	NR_038058	193280	Mm.396842	NR_038058		C030037D09Rik	9330160M04	RIKEN cDNA C030037D09 gene	ncRNA
unique_peak1-4871-9-4-0.867685311516858-1.36011389749466	chr4	11763157	11763670	+	0	NA	Intergenic	L1_Mm|LINE|L1	78109	NM_019753	12557	Mm.33402	NM_019753	ENSMUSG00000028217	Cdh17	HPT-1|HPT-1/LI	cadherin 17	protein-coding
unique_peak2-32811-1-6--2.43441193227435-1.56314192529759	chr1	184140376	184140689	+	0	NA	Intergenic	B1_Mur2|SINE|Alu	-52303	NM_001166728	625823	Mm.479992	NM_001166728		Vmn1r1	EG625823|Gm6628	vomeronasal 1 receptor 1	protein-coding
common_peak2-30219-23-18-0.473839991065495-0.618644178587689	chr7	138919528	138920128	+	0	NA	Intergenic	Intergenic	215923	NM_009774	12237	Mm.927	NM_009774	ENSMUSG00000066979	Bub3	AU019800|AU021329|AU043350|AW146323|C78067	budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae)	protein-coding
common_peak1-18156-74-134--0.360929020072223-1.06702001597824	chr8	12756206	12758487	+	0	NA	exon (NM_015804, exon 1 of 29)	exon (NM_015804, exon 1 of 29)	330	NM_001293667	50770	Mm.257837	NM_015804	ENSMUSG00000031441	Atp11a	4930558F19Rik|AU040868|Atpc1h|Ih	ATPase, class VI, type 11A	protein-coding
unique_peak1-4958-10-2-1.77145284428761-2.09384600808989	chr4	98397335	98397885	+	0	NA	intron (NM_001081202, intron 2 of 4)	intron (NM_001081202, intron 2 of 4)	4165	NM_001081202	381591	Mm.34340	NM_001081202	ENSMUSG00000087166	L1td1	AA546746|AB211064|D76865|ECAT11	LINE-1 type transposase domain containing 1	protein-coding
common_peak1-7872-39-34-0.486478229974187-0.89292906939411	chr1	133693797	133695434	+	0	NA	intron (NM_178079, intron 1 of 12)	intron (NM_178079, intron 1 of 12)	643	NM_178079	212933	Mm.23844	NM_178079	ENSMUSG00000042251	Pm20d1	4732466D17Rik|AI098026	peptidase M20 domain containing 1	protein-coding
common_peak1-15242-13-14--0.12841856497075-0.301029995663977	chr4	10874121	10874721	+	0	NA	Intergenic	Lx6|LINE|L1	60345	NM_175175	71801	Mm.34351	NM_175175	ENSMUSG00000049969	Plekhf2	1110070J07Rik|AA673237|ZFYVE18	pleckstrin homology domain containing, family F (with FYVE domain) member 2	protein-coding
unique_peak1-3931-9-2-1.60465090568306-1.87199725847353	chr2	27233191	27233634	+	0	NA	intron (NM_009500, intron 2 of 27)	intron (NM_009500, intron 2 of 27)	48933	NM_009500	22325	Mm.179011	NM_009500	ENSMUSG00000009621	Vav2	2810040F13Rik|AI847175	vav 2 oncogene	protein-coding
common_peak1-14917-19-10-0.943255708024389-1.16735254179725	chr3	98267151	98268076	+	0	NA	Intergenic	ETnERV2-int|LTR|ERVK	46782	NM_001111336	15495	Mm.14309	NM_008294	ENSMUSG00000095143	Hsd3b4	-	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 4	protein-coding
common_peak1-9258-17-27--0.589058583852566-0.604689589251113	chr11	86952785	86953459	+	0	NA	intron (NM_197987, intron 3 of 23)	RMER6A|LTR|ERVK	12545	NM_197987	68729	Mm.17436	NM_197987	ENSMUSG00000018548	Trim37	1110032A10Rik|2810004E07Rik|AI848587|AU043018|MUL|TEF3|mKIAA0898	tripartite motif-containing 37	protein-coding
unique_peak2-34295-5-6--0.511735258063458-0.947717972411649	chr13	75709460	75709823	+	0	NA	Intergenic	Lx3_Mus|LINE|L1	-72853	NR_030451	751556		NR_030451	miRBase:MI0004644	Mir682	Mirn682|mir-682|mmu-mir-682	microRNA 682	ncRNA
unique_peak1-7126-8-4-0.683294323060208-1.21878474469819	chr9	48981539	48981957	+	0	NA	Intergenic	Intergenic	70864	NM_030709	80893	Mm.72799	NM_030709	ENSMUSG00000032268	Tmprss5	spinesin	transmembrane protease, serine 5 (spinesin)	protein-coding
common_peak2-24469-45-62--0.116921898155045-0.329988325168877	chr17	24414610	24415470	+	0	NA	intron (NM_001031621, intron 25 of 29)	intron (NM_001031621, intron 25 of 29)	-26686	NM_007634	12449	Mm.77695	NM_007634	ENSMUSG00000072082	Ccnf	CycF|Fbxo1	cyclin F	protein-coding
common_peak1-19275-42-14-1.83543873225867-5.75551916672625	chr9	117962192	117963138	+	0	NA	intron (NM_001286508, intron 5 of 7)	intron (NM_001286508, intron 5 of 7)	13025	NM_013727	27215	Mm.92705	NM_013727	ENSMUSG00000039285	Azi2	AA410145|AZ2	5-azacytidine induced gene 2	protein-coding
common_peak2-20015-13-6-0.971117108580164-1.01572999746118	chr1	135510532	135510929	+	0	NA	Intergenic	Intergenic	-3873	NM_009227	20643	Mm.249110	NM_009227	ENSMUSG00000090553	Snrpe	AL022645|C76690|SME	small nuclear ribonucleoprotein E	protein-coding
unique_peak1-607-9-1-2.18961340640422-2.31132995230379	chr10	21436107	21436517	+	0	NA	Intergenic	B3A|SINE|B2	25661	NR_045843	432436	Mm.244553	NM_001004162	ENSMUSG00000056716	Gm5420	EG432436	predicted gene 5420	ncRNA
common_peak1-10211-13-21--0.680959587999529-0.607095980551316	chr13	48967249	48967810	+	0	NA	Intergenic	Intergenic	-1275	NM_011078	18676	Mm.486213	NM_011078	ENSMUSG00000038025	Phf2	GRC5	PHD finger protein 2	protein-coding
unique_peak2-39333-0-8--4.01005593191652-2.05605744720049	chr8	126979115	126979572	+	0	NA	Intergenic	Intergenic	-21507	NM_171824	209966	Mm.234233	NM_171824	ENSMUSG00000050751	Pgbd5	2900019M05Rik|AI854313	piggyBac transposable element derived 5	protein-coding
common_peak2-31992-5-10--1.16381195464315-1.33892459842472	chr9	70656917	70657279	+	0	NA	intron (NM_008280, intron 6 of 8)	intron (NM_008280, intron 6 of 8)	125517	NM_008280	15450	Mm.390187	NM_008280	ENSMUSG00000032207	Lipc	AI256194|HL|Hpl	lipase, hepatic	protein-coding
common_peak2-20480-34-50--0.290356814970229-0.452279894471924	chr10	45066451	45068023	+	0	NA	intron (NM_024285, intron 4 of 7)	L1Md_F2|LINE|L1	11669	NM_024285	23828	Mm.332793	NM_024285	ENSMUSG00000071317	Bves	Pop1|Popdc1|mBVES	blood vessel epicardial substance	protein-coding
common_peak1-15664-24-41--0.599107520011044-0.83607543869935	chr4	136310801	136311716	+	0	NA	intron (NM_010142, intron 3 of 15)	intron (NM_010142, intron 3 of 15)	80668	NM_001290753	13844	Mm.250981	NM_010142	ENSMUSG00000028664	Ephb2	Cek5|Drt|ETECK|Erk|Hek5|Nuk|Prkm5|Qek5|Sek3|Tyro5	Eph receptor B2	protein-coding
common_peak1-18747-63-61-0.484116280683715-1.29803038895612	chr8	125253784	125255388	+	0	NA	Intergenic	Intergenic	-31577	NM_009824	12398	Mm.194339	NM_009824	ENSMUSG00000006362	Cbfa2t3	A630044F12Rik|AI465270|AW229127|Cbfa2t3h|ETO-2|Eto2|MTGR2	core-binding factor, runt domain, alpha subunit 2, translocated to, 3 (human)	protein-coding
common_peak2-20678-8-5-0.420259917226415-1.10484139239135	chr10	86706553	86706920	+	0	NA	Intergenic	URR1B|DNA|MER1_type	185945	NM_029685	76640	Mm.78423	NM_029685	ENSMUSG00000047129	1700113H08Rik	-	RIKEN cDNA 1700113H08 gene	protein-coding
unique_peak2-33495-6-30--2.38879820000657-4.0937649558367	chr11	72135245	72136292	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	7822	NM_001099688	628100	Mm.390365	NM_001099688	ENSMUSG00000070388	Fbxo39	1700010H23Rik	F-box protein 39	protein-coding
common_peak1-10063-11-28--1.34928741087596-1.9654245668484	chr13	21717665	21718327	+	0	NA	Intergenic	Lx7|LINE|L1	13394	NM_146542	218066	Mm.484775	NM_146542	ENSMUSG00000036658	Olfr11	M49|MOR256-11|ORL121	olfactory receptor 11	protein-coding
common_peak1-15316-12-7-0.648775985087639-0.697979855752659	chr4	45491805	45492360	+	0	NA	intron (NM_001033306, intron 2 of 5)	intron (NM_001033306, intron 2 of 5)	51618	NM_001033306	230126	Mm.251716	NM_001033306	ENSMUSG00000044813	Shb	BC028832	src homology 2 domain-containing transforming protein B	protein-coding
unique_peak1-1435-7-1-1.79909083029819-1.80617997398389	chr12	91609218	91609674	+	0	NA	Intergenic	ORR1E|LTR|MaLR	367432	NM_010050	13371	Mm.21389	NM_010050	ENSMUSG00000007682	Dio2	5DII|AI324267|DIOII	deiodinase, iodothyronine, type II	protein-coding
common_peak2-29711-11-13--0.298661337805991-0.337263207250336	chr6	83349256	83349869	+	0	NA	intron (NM_183138, intron 3 of 10)	intron (NM_183138, intron 3 of 10)	1534	NR_105793	102465194		NR_105793		Mir6374	mmu-mir-6374	microRNA mir-6374	ncRNA
common_peak1-10327-66-67-0.431020823175502-1.15814843603165	chr13	73750342	73752867	+	0	NA	intron (NM_146047, intron 9 of 16)	intron (NM_146047, intron 9 of 16)	10154	NM_146047	218335	Mm.30099	NM_146047	ENSMUSG00000021610	Clptm1l	C130052I12Rik|Crr9	CLPTM1-like	protein-coding
common_peak2-29694-20-19-0.16614668970383-0.348739088570342	chr6	81923564	81924169	+	0	NA	Intergenic	RSINE1|SINE|B4	-7923	NM_026490	56284	Mm.276293	NM_026490	ENSMUSG00000030045	Mrpl19	9030416F12Rik|9130412E02Rik|D6Ertd157e|MRP-L15|RLX1|Rpml15	mitochondrial ribosomal protein L19	protein-coding
common_peak2-20590-26-51--0.77254062598263-1.49688973786043	chr10	78590904	78592150	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-20034	NM_001103368	624765	Mm.469843	NM_001103368	ENSMUSG00000091888	Vmn2r80	EG624765	vomeronasal 2, receptor 80	protein-coding
common_peak2-24502-17-37--1.02963117523855-1.57996244908225	chr17	26068707	26069633	+	0	NA	exon (NM_001291025, exon 6 of 12)	exon (NM_001291025, exon 6 of 12)	9764	NM_001291025	14755	Mm.362054	NM_011822	ENSMUSG00000025728	Pigq	Gpi1|Gpi1h|Gpi1p|Gpih	phosphatidylinositol glycan anchor biosynthesis, class Q	protein-coding
unique_peak1-5515-17-10-0.75886471956774-0.917676348953458	chr5	137614337	137615202	+	0	NA	Intergenic	B4|SINE|B4	-22692	NM_201373	384309	Mm.100647	NM_201373		Trim56	A130009K11Rik|Gm452|RNF109	tripartite motif-containing 56	protein-coding
common_peak1-19026-88-118-0.120594645862589-0.407440960255861	chr9	63926908	63929028	+	0	NA	promoter-TSS (NR_040743)	promoter-TSS (NR_040743)	-600	NR_040743	76814	Mm.243771	NR_040743		Scarletltr	2600006L11Rik	Scarletltr, erythroid developmental long intergenic non-protein coding transcript	ncRNA
common_peak1-16164-12-15--0.351224014912361-0.332077462497413	chr5	86172206	86172841	+	0	NA	Intergenic	Intergenic	322085	NM_007683	12617	Mm.4649	NM_007683	ENSMUSG00000029253	Cenpc1	CENP-C|Cenpc	centromere protein C1	protein-coding
common_peak1-12548-53-73--0.0684803532130216-0.307062057408912	chr18	6240870	6241873	+	0	NA	5' UTR (NM_008448, exon 1 of 26)	5' UTR (NM_008448, exon 1 of 26)	151	NM_008448	16573	Mm.223744	NM_008448	ENSMUSG00000006740	Kif5b	AL022807|Khc|Khcs|Kns1|Ukhc	kinesin family member 5B	protein-coding
common_peak1-17977-34-45--0.141493429055747-0.323497957212832	chr7	133121654	133122739	+	0	NA	intron (NM_001101488, intron 2 of 6)	intron (NM_001101488, intron 2 of 6)	103729	NM_001101488	269994	Mm.39599	NM_001101488	ENSMUSG00000046182	Gsg1l	AI852434|C230098I05Rik|G630023A01Rik|Gm637|g1l	GSG1-like	protein-coding
common_peak2-29823-7-5-0.214128329577033-1.01466476204226	chr6	91694800	91695067	+	0	NA	exon (NM_009320, exon 10 of 15)	exon (NM_009320, exon 10 of 15)	60872	NM_009320	21366	Mm.395650	NM_009320	ENSMUSG00000030096	Slc6a6	AA589629|C80501|Taut	solute carrier family 6 (neurotransmitter transporter, taurine), member 6	protein-coding
unique_peak2-35491-3-7--1.41398308995928-1.23214870625617	chr17	46159732	46160217	+	0	NA	intron (NM_001287056, intron 5 of 7)	intron (NM_001287056, intron 5 of 7)	2138	NM_001110267	22339	Mm.282184	NM_009505	ENSMUSG00000023951	Vegfa	Vegf|Vpf	vascular endothelial growth factor A	protein-coding
unique_peak1-1305-17-10-0.75886471956774-0.917676348953458	chr11	120310894	120311772	+	0	NA	intron (NM_012065, intron 2 of 3)	intron (NM_012065, intron 2 of 3)	3464	NM_012065	18588	Mm.39200	NM_012065	ENSMUSG00000025386	Pde6g	Pdeg|p3AT	phosphodiesterase 6G, cGMP-specific, rod, gamma	protein-coding
common_peak2-22880-17-9-0.896368243317676-1.09394599973099	chr14	31404209	31404770	+	0	NA	Intergenic	Intergenic	19154	NR_037237	100526475		NR_037237		Mir3076	mmu-mir-3076	microRNA 3076	ncRNA
unique_peak1-2386-17-1-3.21829633820504-4.59734841376773	chr15	97375951	97376730	+	0	NA	Intergenic	Intergenic	159913	NM_028003	71919	Mm.12255	NM_028003	ENSMUSG00000022466	Rpap3	2310042P20Rik|D15Ertd682e	RNA polymerase II associated protein 3	protein-coding
common_peak2-27773-35-40-0.0738182538444203-0.324581211600972	chr3	132964880	132966026	+	0	NA	Intergenic	Intergenic	-7621	NM_001293641	74776	Mm.210305	NM_146141	ENSMUSG00000028013	Ppa2	1110013G13Rik|Sid6306	pyrophosphatase (inorganic) 2	protein-coding
common_peak2-21215-19-30--0.551508983725189-0.647723624534446	chr11	61929654	61930513	+	0	NA	intron (NM_001029936, intron 1 of 12)	intron (NM_001029936, intron 1 of 12)	39557	NM_001029936	432572	Mm.458025	NM_001029936	ENSMUSG00000042331	Specc1	2810012G08Rik|B230396K10Rik|Cytsb	sperm antigen with calponin homology and coiled-coil domains 1	protein-coding
common_peak2-28531-89-145--0.154857804054015-0.455302203899196	chr5	135167771	135169406	+	0	NA	Intergenic	Intergenic	-4128	NM_010717	16885	Mm.15409	NM_010717	ENSMUSG00000029674	Limk1	-	LIM-domain containing, protein kinase	protein-coding
unique_peak2-37394-8-12--0.695217300193522-0.475924844171029	chr4	141274517	141275201	+	0	NA	intron (NM_001017966, intron 1 of 9)	intron (NM_001017966, intron 1 of 9)	4475	NM_001017966	68817	Mm.393721	NM_001017966		Ddi2	1110056G13Rik|1700027M01Rik|9130022E05Rik|AI604911|AU040698	DNA-damage inducible protein 2	protein-coding
common_peak2-24997-136-110-0.975890808165881-8.16895880922765	chr18	11053340	11055383	+	0	NA	exon (NM_010258, exon 2 of 7)	exon (NM_010258, exon 2 of 7)	-1796	NR_105023	68434	Mm.57626	NR_105022	ENSMUSG00000097222	1010001N08Rik	-	RIKEN cDNA 1010001N08 gene	ncRNA
common_peak2-23306-9-13--0.617741515653384-0.459837087125828	chr15	36346282	36346821	+	0	NA	Intergenic	Intergenic	79995	NM_175134	68839	Mm.396537	NM_175134	ENSMUSG00000048307	Ankrd46	1110054N06Rik|AI314978|AI987733	ankyrin repeat domain 46	protein-coding
unique_peak2-36826-21-26--0.185398236897233-0.318406410381916	chr3	88501848	88503097	+	0	NA	intron (NM_028814, intron 7 of 13)	intron (NM_028814, intron 7 of 13)	12756	NM_028814	74200	Mm.251800	NM_028814	ENSMUSG00000028060	2810403A07Rik	A430106P18Rik|AI256352|AI451678|Blom7|Kiaa0907	RIKEN cDNA 2810403A07 gene	protein-coding
unique_peak2-34864-9-13--0.617741515653384-0.459837087125828	chr15	77397076	77397645	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-5038	NR_040310	76409	Mm.183491	NR_040310		1700025B11Rik	-	RIKEN cDNA 1700025B11 gene	ncRNA
common_peak1-18436-49-140--1.13326752937361-6.60003828615492	chr8	79398409	79399734	+	0	NA	intron (NR_028579, intron 1 of 1)	L2c|LINE|L2	25001	NR_028579	100039211	Mm.367571	NR_028579	ENSMUSG00000074235	Gm10649	ENSMUSG00000074235	predicted gene 10649	ncRNA
common_peak2-22568-11-15--0.491306415748387-0.435191258261915	chr13	63567804	63568512	+	0	NA	Intergenic	Intergenic	-35105	NM_001282942	14088	Mm.126106	NM_007985	ENSMUSG00000021461	Fancc	Facc	Fanconi anemia, complementation group C	protein-coding
common_peak2-22736-25-36--0.347603460283844-0.465043498729215	chr13	109260094	109260936	+	0	NA	Intergenic	Intergenic	153984	NM_178683	218581	Mm.32318	NM_178683	ENSMUSG00000021697	Depdc1b	9830132O03|AW260467|XTP1	DEP domain containing 1B	protein-coding
unique_peak2-39094-6-13--1.2419568116773-1.58711810488664	chr8	77169669	77170220	+	0	NA	Intergenic	Intergenic	-227129	NM_027837	71597	Mm.158735	NM_027837	ENSMUSG00000031621	Isx	9130012O13Rik|Pix-1	intestine specific homeobox	protein-coding
common_peak1-18304-22-40--0.710267899530679-1.05951140195658	chr8	46210452	46211323	+	0	NA	Intergenic	Intergenic	39612	NR_040690	622523	Mm.390032	NR_040690		Gm6329	EG622523	predicted gene 6329	ncRNA
common_peak2-22494-11-16--0.578769256998726-0.503257505534083	chr13	51636892	51637494	+	0	NA	intron (NM_009167, intron 1 of 11)	intron (NM_009167, intron 1 of 11)	25260	NM_009167	20418	Mm.131870	NM_009167	ENSMUSG00000021448	Shc3	N-Shc|Rai|ShcC	src homology 2 domain-containing transforming protein C3	protein-coding
unique_peak2-39493-9-22--1.33394854965279-1.52222891542741	chr9	59291539	59292272	+	0	NA	intron (NM_019927, intron 2 of 13)	YREP_Mm|Unknown|Unknown	37643	NR_045640	100504377	Mm.446631	NR_045640		Gm20199	-	predicted gene, 20199	ncRNA
common_peak1-13135-34-29-0.475177931392747-0.820829064533854	chr19	9836073	9836992	+	0	NA	Intergenic	Intergenic	137491	NM_016692	16319	Mm.29755	NM_016692	ENSMUSG00000024660	Incenp	2700067E22Rik|AU019509|C130081E20|C77457	inner centromere protein	protein-coding
common_peak2-30540-37-63--0.474006928514181-0.879126120438037	chr7	70350865	70351990	+	0	NA	intron (NM_007390, intron 2 of 9)	B4A|SINE|B4	5985	NM_007390	11441	Mm.113464	NM_007390	ENSMUSG00000030525	Chrna7	Acra7|alpha7	cholinergic receptor, nicotinic, alpha polypeptide 7	protein-coding
unique_peak1-5866-8-1-2.00522241794757-2.05605744720049	chr6	84598534	84599107	+	0	NA	intron (NM_177077, intron 20 of 21)	intron (NM_177077, intron 20 of 21)	-54918	NM_001177713	232174	Mm.255246	NM_175475	ENSMUSG00000063415	Cyp26b1	CP26|P450RAI-2	cytochrome P450, family 26, subfamily b, polypeptide 1	protein-coding
common_peak1-12476-63-130--0.595110410466861-2.16358758732552	chr17	84185258	84187429	+	0	NA	intron (NM_054082, intron 11 of 16)	B3|SINE|B2	59787	NM_025325	107766	Mm.30100	NM_025325	ENSMUSG00000000673	Haao	0610007K21Rik|0610012J07Rik|3-HAO|3-HAOxase|3HAO	3-hydroxyanthranilate 3,4-dioxygenase	protein-coding
unique_peak1-36-12-2-2.06381348436648-2.79529063155376	chr1	14274282	14274834	+	0	NA	intron (NM_001252192, intron 2 of 16)	intron (NM_001252192, intron 2 of 16)	25722	NM_001252192	14048	Mm.250185	NM_010164	ENSMUSG00000025932	Eya1	bor	eyes absent 1 homolog (Drosophila)	protein-coding
common_peak2-20658-9-22--1.33394854965279-1.52222891542741	chr10	82699071	82699750	+	0	NA	intron (NM_177388, intron 10 of 10)	RCHARR1|DNA|MER1_type	101152	NM_177388	338365	Mm.67073	NM_177388	ENSMUSG00000034591	Slc41a2	A230035L05Rik|SLC41A1-L1	solute carrier family 41, member 2	protein-coding
unique_peak2-33334-15-22--0.511397205501357-0.50761186003982	chr11	20332852	20333502	+	0	NA	Intergenic	Intergenic	-100461	NM_018861	55963	Mm.6379	NM_018861	ENSMUSG00000020142	Slc1a4	ASCT-1|ASCT1|AW045657|SATT	solute carrier family 1 (glutamate/neutral amino acid transporter), member 4	protein-coding
common_peak2-24018-65-46-0.93757708779949-3.44850397450748	chr16	22161592	22163100	+	0	NA	intron (NM_183029, intron 1 of 15)	CpG	1026	NM_183029	319765	Mm.489442	NM_183029	ENSMUSG00000033581	Igf2bp2	C330012H03Rik|IMP-2|Imp2|Neilsen	insulin-like growth factor 2 mRNA binding protein 2	protein-coding
unique_peak2-36135-6-10--0.894033508256995-1.21398586181642	chr2	14620643	14621139	+	0	NA	intron (NM_023116, intron 2 of 13)	MLT1C|LTR|MaLR	-21378	NR_028497	625342	Mm.484784	NR_028497		Gm13315	OTTMUSG00000011384	lactate dehydrogenase A pseudogene	pseudo
common_peak2-23650-59-77-0.0399617820103293-0.313478684295929	chr15	84714064	84715583	+	0	NA	Intergenic	Intergenic	-28264	NR_030731	271305	Mm.101022	NM_001081166	ENSMUSG00000016624	Phf21b	A730032D07Rik	PHD finger protein 21B	protein-coding
common_peak1-13553-10-21--1.10301627362853-1.16735254179725	chr2	4918863	4919338	+	0	NA	intron (NM_027290, intron 13 of 19)	MT2B|LTR|ERVL	14737	NM_027290	70024	Mm.23828	NM_027290	ENSMUSG00000026669	Mcm10	2410041F14Rik|AU018508|C330019M07Rik|C79164	minichromosome maintenance deficient 10 (S. cerevisiae)	protein-coding
common_peak1-9891-58-57-0.437968939762925-1.07722485289274	chr12	85473097	85474297	+	0	NA	intron (NM_028821, intron 5 of 7)	intron (NM_028821, intron 5 of 7)	15742	NM_027438	70481	Mm.444348	NM_027438	ENSMUSG00000054383	Pnma1	5730402C15Rik	paraneoplastic antigen MA1	protein-coding
common_peak2-21877-12-14--0.25811461052088-0.309074325783021	chr12	86801662	86802439	+	0	NA	Intergenic	B3A|SINE|B2	-12801	NM_010234	14281	Mm.246513	NM_010234	ENSMUSG00000021250	Fos	D12Rfj1|c-fos|cFos	FBJ osteosarcoma oncogene	protein-coding
unique_peak2-33754-2-5--1.50241675698448-1.08602067057793	chr11	117482376	117482836	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	10045	NR_015489	78403	Mm.212543	NR_015489		2900041M22Rik	-	RIKEN cDNA 2900041M22 gene	ncRNA
common_peak1-8691-92-67-1.00488924245243-5.49672673837487	chr11	52231303	52232737	+	0	NA	Intergenic	Intergenic	22090	NM_153117	213673	Mm.291979	NM_153117	ENSMUSG00000036275	9530068E07Rik	C85061|Kct2	RIKEN cDNA 9530068E07 gene	protein-coding
common_peak1-15257-22-41--0.745033317691356-1.15174830603352	chr4	19708231	19709211	+	0	NA	Intergenic	Intergenic	-37153	NM_028746	74087	Mm.173833	NM_028746	ENSMUSG00000041052	Slc7a13	0610009O04Rik|AGT-1|AGT1|XAT2	solute carrier family 7, (cationic amino acid transporter, y+ system) member 13	protein-coding
unique_peak1-1950-11-0-3.50869358425161-3.61235994796777	chr14	99362195	99362699	+	0	NA	Intergenic	L1MA6|LINE|L1	82908	NM_175245	76789	Mm.38912	NM_175245	ENSMUSG00000033186	Mzt1	2410129H14Rik|AI120158|Mozart1	mitotic spindle organizing protein 1	protein-coding
common_peak1-11085-8-7-0.00522241794757061-1.00793137938329	chr15	59408561	59409077	+	0	NA	intron (NM_026746, intron 4 of 6)	L1_Mus2|LINE|L1	-71390	NM_144549	211770	Mm.40298	NM_144549	ENSMUSG00000032501	Trib1	A530090O15Rik|TRB-1|Trb1	tribbles homolog 1 (Drosophila)	protein-coding
unique_peak2-32835-7-32--2.24530328906026-4.07016573886258	chr1	191934011	191934875	+	0	NA	Intergenic	RMER19A|LTR|ERVK	60116	NM_008937	19130	Mm.132579	NM_008937	ENSMUSG00000010175	Prox1	A230003G05Rik	prospero homeobox 1	protein-coding
unique_peak1-2943-16-4-1.7963355473807-2.18192634393779	chr17	65775600	65776273	+	0	NA	intron (NM_001289485, intron 12 of 15)	intron (NM_001289485, intron 12 of 15)	114186	NM_001008973	381107	Mm.141275	NM_001008973	ENSMUSG00000045036	Tmem232	E130009J12Rik|Gm940|Tes13-L|Tes13-S	transmembrane protein 232	protein-coding
common_peak1-11250-8-8--0.164702583494742-1.00793137938329	chr15	80083996	80084398	+	0	NA	TTS (NM_178719)	TTS (NM_178719)	-1417	NM_001287180	11911	Mm.641	NM_009716	ENSMUSG00000042406	Atf4	Atf-4|C/ATF|CREB2|TAXREB67	activating transcription factor 4	protein-coding
common_peak1-18991-14-20--0.493101262421116-0.456667090758524	chr9	57645144	57645696	+	0	NA	intron (NM_019689, intron 4 of 7)	intron (NM_019689, intron 4 of 7)	-31753	NM_007713	102414	Mm.25720	NM_007713	ENSMUSG00000032316	Clk3	AI256811	CDC-like kinase 3	protein-coding
common_peak2-27136-24-19-0.471281807880354-0.677583764578261	chr3	27607243	27607856	+	0	NA	intron (NM_173182, intron 1 of 25)	PB1D7|SINE|Alu	1812	NM_173182	72007	Mm.38832	NM_173182	ENSMUSG00000039286	Fndc3b	1600019O04Rik|AW550168|Fad104|mKIAA4164	fibronectin type III domain containing 3B	protein-coding
unique_peak1-2733-20-6-1.68071986253359-2.41165147706372	chr16	97494506	97495405	+	0	NA	Intergenic	B3A|SINE|B2	-83380	NM_019517	56175	Mm.97885	NM_019517	ENSMUSG00000040605	Bace2	1110059C24Rik|AEPLC|AI850424|ALP56|ARP1|ASP21|BAE2|CDA13|CEAP1|DRAP	beta-site APP-cleaving enzyme 2	protein-coding
unique_peak1-5867-21-2-2.98452676454508-5.06563262809273	chr6	85273726	85274479	+	0	NA	intron (NM_178639, intron 1 of 13)	ID4|SINE|ID	9314	NM_178639	94282	Mm.121485	NM_178639	ENSMUSG00000033720	Sfxn5	C230001H08Rik	sideroflexin 5	protein-coding
common_peak1-16592-24-16-0.705747061517378-1.02077663956384	chr5	149006875	149007808	+	0	NA	intron (NM_029920, intron 4 of 14)	MLT1A0|LTR|MaLR	204139	NM_007513	11987	Mm.275489	NM_007513	ENSMUSG00000041313	Slc7a1	4831426K01Rik|AI447493|Atrc-1|Atrc1|Cat1|Rec-1|Rev-1|mCAT-1	solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	protein-coding
unique_peak2-38602-3-7--1.41398308995928-1.23214870625617	chr7	79715473	79715801	+	0	NA	Intergenic	Intergenic	-264156	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding
common_peak1-8755-20-41--0.904242638187568-1.56490221051684	chr11	4848629	4849560	+	0	NA	intron (NM_001243043, intron 1 of 22)	intron (NM_001243043, intron 1 of 22)	-1027	NM_010904	380684	Mm.298283	NM_010904	ENSMUSG00000020396	Nefh	NF-H|NF200|Nfh|mKIAA0845	neurofilament, heavy polypeptide	protein-coding
unique_peak1-987-6-1-1.5653981103803-1.56314192529759	chr11	68451781	68452249	+	0	NA	Intergenic	Intergenic	51476	NM_177779	276920	Mm.123046	NM_177779	ENSMUSG00000045915	Ccdc42	A530001H01Rik	coiled-coil domain containing 42	protein-coding
common_peak1-8627-50-75--0.206987196964633-0.425859000017569	chr10	119238819	119240248	+	0	NA	intron (NM_133442, intron 1 of 21)	intron (NM_133442, intron 1 of 21)	-16912	NM_001277294	74053	Mm.196692	NM_028736	ENSMUSG00000034813	Grip1	4931400F03Rik|GRIP|eb	glutamate receptor interacting protein 1	protein-coding
common_peak1-8339-33-49--0.312518627249196-0.498996592876743	chr10	45066410	45067937	+	0	NA	intron (NM_024285, intron 4 of 7)	L1Md_F2|LINE|L1	11605	NM_024285	23828	Mm.332793	NM_024285	ENSMUSG00000071317	Bves	Pop1|Popdc1|mBVES	blood vessel epicardial substance	protein-coding
common_peak2-22590-14-26--0.855671341805824-0.949797625454538	chr13	72624128	72624924	+	0	NA	Intergenic	Intergenic	141486	NR_030701	328287	Mm.235072	NR_030701		Gm20554	D430050G20	predicted gene, 20554	ncRNA
common_peak2-21540-7-6--0.00826409175941478-0.97990265578305	chr11	95823990	95824391	+	0	NA	TTS (NR_037223)	TTS (NR_037223)	507	NR_037223	100526468		NR_037223	miRBase:MI0014025	Mir3063	mmu-mir-3063	microRNA 3063	ncRNA
common_peak1-19325-16-11-0.533301141546906-0.58239619684445	chr9	124068498	124069298	+	0	NA	Intergenic	L1Md_F2|LINE|L1	32616	NM_009917	12774	Mm.14302	NM_009917	ENSMUSG00000079227	Ccr5	AM4-7|CD195|Cmkbr5	chemokine (C-C motif) receptor 5	protein-coding
unique_peak1-6869-41-3-3.70114870484866-11.8012694681681	chr8	88288620	88289644	+	0	NA	intron (NM_028007, intron 9 of 17)	intron (NM_028007, intron 9 of 17)	64328	NR_106189	102465898		NR_106189	miRBase:MI0026041	Mir8109	mmu-mir-8109	microRNA mir-8109	ncRNA
unique_peak1-2755-14-5-1.31425365963649-1.4372489031793	chr17	4536801	4537087	+	0	NA	Intergenic	(GGAGAA)n|Simple_repeat|Simple_repeat	-414842	NR_045462	78043	Mm.398313	NR_045462		4930548J01Rik	1700113K09Rik	RIKEN cDNA 4930548J01 gene	ncRNA
unique_peak1-5549-7-2-1.21412832957703-1.45399745587252	chr5	143059425	143059884	+	0	NA	intron (NM_175217, intron 1 of 6)	intron (NM_175217, intron 1 of 6)	25052	NM_175217	75104	Mm.48712	NM_175217		Mmd2	4930518M15Rik|C88001	monocyte to macrophage differentiation-associated 2	protein-coding
unique_peak1-5699-18-6-1.50556422917075-2.02801025126771	chr6	34795600	34796450	+	0	NA	intron (NM_178630, intron 17 of 18)	RCHARR1|DNA|MER1_type	-17121	NM_197986	68487	Mm.248440	NM_197986	ENSMUSG00000057137	Tmem140	1110007F12Rik	transmembrane protein 140	protein-coding
common_peak2-31944-10-18--0.891512168434816-0.804350088532826	chr9	64252836	64253533	+	0	NA	intron (NM_172522, intron 1 of 22)	B1_Mur4|SINE|Alu	19751	NM_001134399	214058	Mm.127721	NM_172522	ENSMUSG00000036466	Megf11	2410080H04Rik|D130061K05	multiple EGF-like-domains 11	protein-coding
common_peak1-10919-83-124--0.0515616595559605-0.309007032436511	chr15	6707281	6709499	+	0	NA	intron (NM_030168, intron 7 of 37)	intron (NM_030168, intron 7 of 37)	50009	NM_030168	78757	Mm.275811	NM_030168	ENSMUSG00000050310	Rictor	4921505C17Rik|6030405M08Rik|AVO3|AW492497|D530039E11Rik	RPTOR independent companion of MTOR, complex 2	protein-coding
unique_peak1-34-10-5-0.771452844287613-1.33892459842472	chr1	13305040	13305653	+	0	NA	intron (NM_001077695, intron 1 of 21)	intron (NM_001077695, intron 1 of 21)	58818	NM_001077695	17978	Mm.2537	NM_008678	ENSMUSG00000005886	Ncoa2	9530095N19|D1Ertd433e|GRIP-1|Grip1|KAT13C|SRC-2|TIF-2|TIF2|bHLHe75	nuclear receptor coactivator 2	protein-coding
common_peak1-18223-25-33--0.225612935905233-0.357106932979091	chr8	25602246	25602877	+	0	NA	Intergenic	Intergenic	-53143	NM_026931	69068	Mm.25775	NM_026931	ENSMUSG00000056313	1810011O10Rik	1110065B09Rik|AW121743|AW321058	RIKEN cDNA 1810011O10 gene	protein-coding
unique_peak2-37346-2-6--1.72480917832092-1.26211192963361	chr4	133213528	133213906	+	0	NA	Intergenic	B1F1|SINE|Alu	14845	NM_001145955	230801	Mm.217004	NM_178698		Pigv	B330013B03|D430024F16Rik	phosphatidylinositol glycan anchor biosynthesis, class V	protein-coding
unique_peak2-33688-2-6--1.72480917832092-1.26211192963361	chr11	103264367	103264780	+	0	NA	intron (NM_183034, intron 2 of 11)	(TGAA)n|Simple_repeat|Simple_repeat	9405	NM_183034	353047	Mm.383308	NM_183034	ENSMUSG00000034247	Plekhm1	AP162|B2|BC038943|D330036J23Rik	pleckstrin homology domain containing, family M (with RUN domain) member 1	protein-coding
common_peak2-29321-18-17-0.142994149786039-0.353907621462753	chr5	146702675	146703377	+	0	NA	Intergenic	L1Md_A|LINE|L1	-11596	NM_007818	13112	Mm.332844	NM_007818	ENSMUSG00000056035	Cyp3a11	AI256190|Cyp3a|IIIAm1|Pcn	cytochrome P450, family 3, subfamily a, polypeptide 11	protein-coding
unique_peak1-2292-12-6-0.841421063030034-1.58711810488664	chr15	80163205	80163845	+	0	NA	intron (NM_001044308, intron 4 of 36)	intron (NM_001044308, intron 4 of 36)	45857	NM_001044308	239556	Mm.291058	NM_001044308	ENSMUSG00000022416	Cacna1i	Ca(V)3.3	calcium channel, voltage-dependent, alpha 1I subunit	protein-coding
common_peak2-22911-10-8-0.186490343566457-1.078512453669	chr14	40947620	40948056	+	0	NA	Intergenic	L1Md_F2|LINE|L1	478887	NR_045936	73591	Mm.65499	NR_045936		1700109I08Rik	-	RIKEN cDNA 1700109I08 gene	ncRNA
unique_peak1-970-7-0-2.79909083029819-2.40823996531185	chr11	61615599	61616105	+	0	NA	intron (NM_013881, intron 16 of 26)	intron (NM_013881, intron 16 of 26)	-40262	NM_001164243	212627	Mm.27703	NM_144806	ENSMUSG00000020528	Prpsap2	A230054F23Rik	phosphoribosyl pyrophosphate synthetase-associated protein 2	protein-coding
common_peak1-19484-23-45--0.801794451547932-1.41868709588403	chrX	144317581	144318819	+	0	NA	Intergenic	MURVY-LTR|LTR|ERV1	-109336	NM_001198988	666184	Mm.422381	NM_001198988	ENSMUSG00000072931	Gm15080	OTTMUSG00000018964|Ott-like	predicted gene 15080	protein-coding
common_peak1-13625-23-14-0.814876908900562-1.09492971584134	chr2	25210729	25211602	+	0	NA	exon (NM_031843, exon 4 of 13)	exon (NM_031843, exon 4 of 13)	687	NM_031843	83768	Mm.21440	NM_031843	ENSMUSG00000026958	Dpp7	DPPII|Dpp2|QPP	dipeptidylpeptidase 7	protein-coding
common_peak2-22243-15-34--1.11711826638931-1.74023246399357	chr13	53001545	53002616	+	0	NA	intron (NM_016709, intron 3 of 9)	intron (NM_016709, intron 3 of 9)	22966	NM_016709	11992	Mm.252034	NM_016709	ENSMUSG00000021460	Auh	C77140|W91705	AU RNA binding protein/enoyl-coenzyme A hydratase	protein-coding
unique_peak2-35051-7-10--0.660340788339108-1.12966497611638	chr16	8666274	8666934	+	0	NA	intron (NM_025821, intron 1 of 3)	intron (NM_025821, intron 1 of 3)	5642	NM_025821	52502	Mm.142095	NM_025821	ENSMUSG00000008393	Carhsp1	1200011K09Rik|Crhsp-24|D16Ertd465e	calcium regulated heat stable protein 1	protein-coding
common_peak2-22913-15-44--1.47968834577402-3.25159220037128	chr14	41012807	41014077	+	0	NA	Intergenic	L1_Mur1|LINE|L1	544491	NR_045936	73591	Mm.65499	NR_045936		1700109I08Rik	-	RIKEN cDNA 1700109I08 gene	ncRNA
common_peak1-13417-184-199-0.652135313013994-5.94688116944566	chr19	53389483	53392021	+	0	NA	intron (NM_001008542, intron 1 of 5)	B4A|SINE|B4	5756	NM_001008542	17859	Mm.2154	NM_010847	ENSMUSG00000025025	Mxi1	ENSMUSG00000067085|Gm10197|Mad2|bHLHc11	Max interacting protein 1	protein-coding
unique_peak1-5657-13-4-1.45654393575041-2.23384849113406	chr6	30305799	30306396	+	0	NA	Intergenic	Intergenic	34913	NM_172735	232679	Mm.29780	NM_172735	ENSMUSG00000039130	Zc3hc1	1110054L24Rik|AU018540|AU019789|HSPC216|Nipa	zinc finger, C3HC type 1	protein-coding
common_peak2-29168-56-55-0.428240903381639-0.97183630865368	chr5	134183834	134184745	+	0	NA	Intergenic	MTD|LTR|MaLR	-391329	NM_030719	80909	Mm.45218	NM_030719		Gatsl2	7530428J21Rik|AW742413|Gats|Gatsl1	GATS protein-like 2	protein-coding
common_peak1-13669-36-35-0.309396084725442-0.573175361577103	chr2	27677253	27678409	+	0	NA	Intergenic	Intergenic	-64114	NM_015734	12831	Mm.7281	NM_015734	ENSMUSG00000026837	Col5a1	AI413331	collagen, type V, alpha 1	protein-coding
unique_peak1-7093-10-4-1.03448725012141-1.5150158574804	chr9	40320378	40320921	+	0	NA	Intergenic	Intergenic	-57300	NM_172768	235283	Mm.138434	NM_172768	ENSMUSG00000040111	Gramd1b	3222402H23|A930008A22Rik|AI593249|mKIAA1201	GRAM domain containing 1B	protein-coding
unique_peak1-5905-12-4-1.32684789020028-2.04196296489515	chr6	87857261	87857901	+	0	NA	intron (NM_017477, intron 19 of 23)	intron (NM_017477, intron 19 of 23)	-6389	NM_173737	232210	Mm.246241	NM_173737	ENSMUSG00000030060	Hmces	8430410A17Rik|C85376	5-hydroxymethylcytosine (hmC) binding, ES cell specific	protein-coding
common_peak2-28508-30-28-0.311694414364301-0.518746288394487	chr5	33652067	33652913	+	0	NA	Intergenic	RLTR14-int|LTR|ERV1	-25731	NM_021500	59003	Mm.281642	NM_021500	ENSMUSG00000079562	Maea	1110030D19Rik|EMP|Gid9	macrophage erythroblast attacher	protein-coding
common_peak1-8320-24-49--0.850646287007008-1.56058662248874	chr10	42501251	42502521	+	0	NA	intron (NM_153055, intron 1 of 20)	RSINE1|SINE|B4	20584	NM_153055	140740	Mm.214344	NM_153055	ENSMUSG00000019802	Sec63	5730478J10Rik|AI649014|AW319215	SEC63-like (S. cerevisiae)	protein-coding
common_peak1-14379-11-10-0.0492619656143161-0.31137425193576	chr2	168080846	168081373	+	0	NA	Intergenic	B1F2|SINE|Alu	13722	NM_001081134	241794	Mm.425102	NM_001081134	ENSMUSG00000074575	Kcng1	AW536275|OTTMUSG00000016048	potassium voltage-gated channel, subfamily G, member 1	protein-coding
common_peak2-25909-14-8-0.729291158915332-0.771068449301682	chr19	46152569	46153005	+	0	NA	intron (NM_001039353, intron 1 of 12)	B3A|SINE|B2	2450	NM_001039351	70769	Mm.402190	NM_053086	ENSMUSG00000015176	Nolc1	NOPP130|NOPP140|P130	nucleolar and coiled-body phosphoprotein 1	protein-coding
common_peak2-29045-15-11-0.4272022498345-0.503257505534083	chr5	115157511	115158143	+	0	NA	promoter-TSS (NM_029992)	promoter-TSS (NM_029992)	39	NM_029992	77832	Mm.239698	NM_029992	ENSMUSG00000002486	Tchp	A930031F18Rik|AV279199	trichoplein, keratin filament binding	protein-coding
common_peak2-21032-95-126-0.159230658251849-0.508577621102526	chr11	32642381	32644132	+	0	NA	intron (NM_134015, intron 13 of 13)	intron (NM_134015, intron 13 of 13)	81338	NM_027050	69351	Mm.65488	NM_027050	ENSMUSG00000020270	Smim23	1700008A04Rik	small integral membrane protein 23	protein-coding
common_peak2-27644-15-6-1.20480982849805-1.32521814697968	chr3	107741434	107741854	+	0	NA	TTS (NM_008184)	TTS (NM_008184)	5023	NM_008184	14867	Mm.458154	NM_008184	ENSMUSG00000068762	Gstm6	-	glutathione S-transferase, mu 6	protein-coding
common_peak2-32399-15-35--1.15776025088666-1.87578206828671	chrX	142389536	142390471	+	0	NA	Intergenic	Lx9|LINE|L1	-467821	NM_153319	27494	Mm.100068	NM_153319	ENSMUSG00000041688	Amot	CAG-2|D0Kist1|Sii6	angiomotin	protein-coding
common_peak1-14405-12-16--0.4386868561627-0.368541233333383	chr2	173737346	173737993	+	0	NA	Intergenic	Lx7|LINE|L1	-164883	NM_172675	228960	Mm.277977	NM_172675	ENSMUSG00000027522	Stx16	4930401D03|5430410K23Rik|6330500A18Rik|AI648908|AW553605|Syn16	syntaxin 16	protein-coding
unique_peak1-6692-20-5-1.90311228387004-2.81016724606745	chr8	31374072	31375063	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-304300	NR_045856	71314	Mm.158666	NR_045856	ENSMUSG00000097044	4933433F19Rik	-	RIKEN cDNA 4933433F19 gene	ncRNA
common_peak1-11010-91-85-0.64716719090024-2.79030669339518	chr15	37006238	37008410	+	0	NA	Intergenic	RLTR45-int|LTR|ERVK	-70167	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
common_peak2-31979-10-9-0.0344872501214071-1.05503135781948	chr9	69456111	69456528	+	0	NA	Intergenic	Intergenic	151568	NR_037296	100526560		NR_037296	miRBase:MI0014106	Mir3109	mmu-mir-3109	microRNA 3109	ncRNA
common_peak1-10429-36-30-0.525124775780879-0.956885677565404	chr13	100832628	100833615	+	0	NA	intron (NM_001081061, intron 16 of 38)	B2_Mm1t|SINE|B2	40904	NM_001081061	544971	Mm.288546	NM_001081061	ENSMUSG00000049658	Bdp1	AI662220|AW049390|AW456745|B130055N23Rik|G630013P12Rik|TAF3B1|TFC5|TFIIIB150|TFIIIB90|Tfnr|mKIAA1241	B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB	protein-coding
common_peak2-28770-43-82--0.592476245823222-1.46410551884986	chr5	52189694	52190615	+	0	NA	Intergenic	Intergenic	-244994	NM_008904	19017	Mm.259072	NM_008904	ENSMUSG00000029167	Ppargc1a	A830037N07Rik|ENSMUSG00000079510|Gm11133|PGC-1|PGC-1v|Pgc-1alpha|Pgc1|Pgco1|Ppargc1	peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	protein-coding
common_peak1-15517-15-21--0.447266868081641-0.448200956659578	chr4	117133483	117134196	+	0	NA	intron (NM_025739, intron 2 of 14)	intron (NM_025739, intron 2 of 14)	35681	NM_025739	66743	Mm.318331	NM_025739	ENSMUSG00000028677	Rnf220	4732477A13|4931406I20Rik|5730503K05Rik|AV302541	ring finger protein 220	protein-coding
common_peak2-21820-7-7--0.200909169701811-0.97990265578305	chr11	119816927	119817374	+	0	NA	intron (NM_130862, intron 1 of 13)	intron (NM_130862, intron 1 of 13)	12744	NM_130862	108100	Mm.197534	NM_130862	ENSMUSG00000025372	Baiap2	IRSp53|R75030	brain-specific angiogenesis inhibitor 1-associated protein 2	protein-coding
unique_peak1-5541-17-8-1.04837133676273-1.30305656033811	chr5	140764916	140765809	+	0	NA	intron (NM_010752, intron 9 of 17)	MTD|LTR|MaLR	32144	NM_010752	17120	Mm.27250	NM_010752	ENSMUSG00000029554	Mad1l1	AI173502|AW550425|Mad1	MAD1 mitotic arrest deficient 1-like 1	protein-coding
common_peak2-24640-20-37--0.759852728852392-1.13829382151971	chr17	35051179	35052133	+	0	NA	TTS (NM_001286575)	TTS (NM_001286575)	245	NM_023557	70129	Mm.183126	NM_023557	ENSMUSG00000007034	Slc44a4	2210409B01Rik|NG22	solute carrier family 44, member 4	protein-coding
common_peak2-27469-7-6--0.00826409175941478-0.97990265578305	chr3	90603590	90603955	+	0	NA	Intergenic	L1Md_F3|LINE|L1	72944	NM_207263	384997	Mm.316644	NM_207263	ENSMUSG00000042250	Pglyrp4	Gm1478|Gm413	peptidoglycan recognition protein 4	protein-coding
common_peak2-22555-9-9--0.132314688483142-1.03275496310833	chr13	62760224	62760764	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-34952	NM_173381	211378	Mm.247448	NM_173381		6720489N17Rik	9330128I06	RIKEN cDNA 6720489N17 gene	protein-coding
common_peak2-27535-14-15--0.100783839642355-0.301029995663982	chr3	96070163	96070798	+	0	NA	Intergenic	Intergenic	-2097	NM_178215	319154	Mm.383293	NM_178215	ENSMUSG00000074403	Hist2h3b	H3-615|H3-616	histone cluster 2, H3b	protein-coding
unique_peak2-38765-8-10--0.454209200689727-1.078512453669	chr7	123110220	123110797	+	0	NA	intron (NM_001025559, intron 1 of 15)	intron (NM_001025559, intron 1 of 15)	28092	NM_011445	20679	Mm.323365	NM_011445	ENSMUSG00000051910	Sox6	AI987981|SOX-LZ	SRY (sex determining region Y)-box 6	protein-coding
common_peak2-27596-87-94-0.425781497450221-1.43622305832489	chr3	102755279	102757211	+	0	NA	intron (NM_201622, intron 3 of 10)	intron (NM_201622, intron 3 of 10)	11811	NM_201622	381463	Mm.331269	NM_198658	ENSMUSG00000048938	Nr1h5	Fxrb	nuclear receptor subfamily 1, group H, member 5	protein-coding
unique_peak1-5922-9-2-1.60465090568306-1.87199725847353	chr6	89342891	89343415	+	0	NA	intron (NM_001167736, intron 5 of 6)	intron (NM_001167736, intron 5 of 6)	-30546	NM_008881	18844	Mm.3789	NM_008881	ENSMUSG00000030084	Plxna1	2600013D04Rik|NOV|PlexA1|Plxn1|mKIAA4053	plexin A1	protein-coding
unique_peak2-33774-5-7--0.704380336005853-1.01466476204226	chr11	118403773	118404224	+	0	NA	intron (NM_001285436, intron 3 of 13)	intron (NM_001285436, intron 3 of 13)	65724	NM_172573	217364	Mm.473963	NM_172573	ENSMUSG00000033857	Engase	C130099A03|D230014K01Rik	endo-beta-N-acetylglucosaminidase	protein-coding
common_peak1-9185-16-23--0.466698858453094-0.497202060940027	chr11	78751148	78751806	+	0	NA	intron (NM_010927, intron 9 of 26)	intron (NM_010927, intron 9 of 26)	17116	NM_010927	18126	Mm.2893	NM_010927	ENSMUSG00000020826	Nos2	NOS-II|Nos-2|Nos2a|i-NOS|iNOS	nitric oxide synthase 2, inducible	protein-coding
common_peak2-30040-19-9-1.08075923177432-1.37307999835977	chr6	126035790	126036363	+	0	NA	Intergenic	Intergenic	78902	NM_001164035	18205	Mm.267570	NM_008742	ENSMUSG00000049107	Ntf3	AI316846|AI835689|Nt3|Ntf-3	neurotrophin 3	protein-coding
common_peak2-26843-5-6--0.511735258063458-0.947717972411649	chr2	153632828	153633144	+	0	NA	Intergenic	Intergenic	26371	NR_036629	100504221	Mm.246778	NM_177849	ENSMUSG00000044083	Efcab8	A630008I04|EG329541	EF-hand calcium binding domain 8	ncRNA
common_peak2-21655-20-30--0.466121525795682-0.569352520859861	chr11	102602960	102604135	+	0	NA	Intergenic	Intergenic	-19206	NM_009613	11488	Mm.89854	NM_009613	ENSMUSG00000020926	Adam11	AW060611|Mdc	a disintegrin and metallopeptidase domain 11	protein-coding
common_peak1-12365-63-108--0.329871733706336-0.793070504859626	chr17	63498929	63500609	+	0	NA	intron (NM_015794, intron 7 of 8)	intron (NM_015794, intron 7 of 8)	-269103	NM_010109	13640	Mm.7978	NM_010109		Efna5	AL-1|AV158822|EFL-5|Ephrin-A5|Epl7|LERK-7|RAGS	ephrin A5	protein-coding
unique_peak2-34111-6-6--0.241956811677302-0.947717972411649	chr13	21506298	21506631	+	0	NA	Intergenic	Intergenic	-11840	NM_023685	72739	Mm.296071	NM_023685	ENSMUSG00000021327	Zkscan3	2810435N07Rik|AA408594|AI132359|Skz1|Zf47|Zfp-47|Zfp306|Zfp307|mszf35	zinc finger with KRAB and SCAN domains 3	protein-coding
unique_peak2-35548-4-22--2.54702246991026-3.28004177908661	chr17	62879693	62880312	+	0	NA	Intergenic	Intergenic	350664	NM_207654	13640	Mm.7978	NM_010109		Efna5	AL-1|AV158822|EFL-5|Ephrin-A5|Epl7|LERK-7|RAGS	ephrin A5	protein-coding
common_peak2-31535-31-45--0.29832328524389-0.470780655014941	chr8	111027279	111028378	+	0	NA	Intergenic	Intergenic	80749	NR_077224	109215	Mm.65282	NR_077224		3010033K07Rik	-	RIKEN cDNA 3010033K07 gene	ncRNA
unique_peak2-34861-8-14--0.901668177660948-0.660903317613906	chr15	77150280	77150743	+	0	NA	Intergenic	Intergenic	-13028	NM_053104	93686	Mm.202774	NM_053104	ENSMUSG00000033565	Rbfox2	Fbm2|Fxh|Hrnbp2|Rbm9	RNA binding protein, fox-1 homolog (C. elegans) 2	protein-coding
unique_peak1-848-12-3-1.64877598508764-2.36932189928148	chr11	18574457	18575134	+	0	NA	Intergenic	Intergenic	344177	NM_001193271	17268	Mm.356578	NM_010789	ENSMUSG00000020160	Meis1	C530044H18Rik|Evi8	Meis homeobox 1	protein-coding
unique_peak2-33329-0-4--3.16205902536157-1.10720996964787	chr11	19829508	19829857	+	0	NA	intron (NM_033523, intron 1 of 5)	intron (NM_033523, intron 1 of 5)	5237	NM_033523	114716	Mm.266627	NM_033523	ENSMUSG00000045671	Spred2	C79158	sprouty-related, EVH1 domain containing 2	protein-coding
common_peak2-20661-20-50--1.1843505573803-2.72904913530878	chr10	82860085	82861051	+	0	NA	Intergenic	Intergenic	37602	NM_026579	28109	Mm.196210	NM_026579	ENSMUSG00000020255	D10Wsu102e	AI747614|C430041I18Rik	DNA segment, Chr 10, Wayne State University 102, expressed	protein-coding
common_peak2-22720-11-11--0.0762689164695427-0.301029995663976	chr13	104036849	104037479	+	0	NA	intron (NM_175171, intron 1 of 28)	intron (NM_175171, intron 1 of 28)	87408	NM_175171	328329	Mm.202606	NM_175171	ENSMUSG00000034751	Mast4	4930420O11Rik|AI642422|mKIAA0303	microtubule associated serine/threonine kinase family member 4	protein-coding
common_peak2-24302-36-34-0.350038069222788-0.634705740500755	chr17	27556601	27558086	+	0	NA	Intergenic	ID_B1|SINE|B4	62301	NR_106077	102466228		NR_106077		Mir7218	mmu-mir-7218	microRNA mir-7218	ncRNA
unique_peak1-5017-12-6-0.841421063030034-1.58711810488664	chr4	126609682	126610245	+	0	NA	intron (NM_001114399, intron 2 of 29)	B3|SINE|B2	35204	NM_001114399	67785	Mm.165401	NM_001114399	ENSMUSG00000042446	Zmym4	6330503C17Rik|AI480785|AW493829|CDIR|D630001M21|MYM|Zfp262|Znf262|mKIAA0425	zinc finger, MYM-type 4	protein-coding
common_peak1-16032-10-13--0.450939577048835-0.386243247519795	chr5	36397623	36398193	+	0	NA	intron (NM_030889, intron 9 of 26)	intron (NM_030889, intron 9 of 26)	-148762	NM_175249	76943	Mm.44242	NM_175249	ENSMUSG00000043430	Psapl1	2310020A21Rik	prosaposin-like 1	protein-coding
common_peak1-15464-57-70-0.116285920574247-0.373439789566456	chr4	103214258	103215610	+	0	NA	Intergenic	Intergenic	159829	NR_040673	622167	Mm.244115	NR_040673	ENSMUSG00000086136	Gm12718	OTTMUSG00000008109	predicted gene 12718	ncRNA
common_peak1-11334-6-4-0.24347001549294-0.989110657569874	chr15	85972118	85972579	+	0	NA	intron (NM_145475, intron 12 of 12)	intron (NM_145475, intron 12 of 12)	44223	NM_145475	223753	Mm.222685	NM_145475	ENSMUSG00000035891	Cerk	AI848610|D330016D08Rik|mKIAA1646	ceramide kinase	protein-coding
unique_peak1-455-12-5-1.06381348436648-1.78669045979184	chr1	168428007	168428633	+	0	NA	promoter-TSS (NM_001164306)	promoter-TSS (NM_001164306)	-601	NM_001164306	226601	Mm.475593	NM_001164306	ENSMUSG00000086056	Gm4846	EG226601|Fmo13	predicted gene 4846	protein-coding
common_peak1-13860-16-10-0.658832023630764-0.699649909729472	chr2	66145222	66145905	+	0	NA	intron (NM_018733, intron 17 of 26)	L1Md_F2|LINE|L1	-50889	NM_001290669	73668	Mm.250868	NM_001047604	ENSMUSG00000034848	Ttc21b	2410066K11Rik|Thm1|aln|mKIAA1992	tetratricopeptide repeat domain 21B	protein-coding
common_peak1-10697-90-104-0.340059508276029-1.07351649932843	chr14	56810654	56813092	+	0	NA	Intergenic	L1Md_T|LINE|L1	18371	NM_010374	14943	Mm.457976	NM_010374	ENSMUSG00000015441	Gzmf	CCP4|Ctla-7|Ctla7|MCSP-3	granzyme F	protein-coding
common_peak2-20974-27-48--0.623163893219973-1.00060938969219	chr11	20740585	20741551	+	0	NA	Intergenic	(TA)n|Simple_repeat|Simple_repeat	-9957	NM_173752	216551	Mm.76694	NM_173752	ENSMUSG00000042363	Lgalsl	1110067D22Rik|A530071M23|Grpa|Hspc159|Lgalsla	lectin, galactoside binding-like	protein-coding
unique_peak1-5883-6-2-0.980435609659146-1.26211192963361	chr6	86579460	86579834	+	0	NA	TTS (NM_026414)	TTS (NM_026414)	1479	NM_026414	67855	Mm.183043	NM_026414	ENSMUSG00000033508	Asprv1	2300003P22Rik|AA986851|SASP|SASPase|Taps	aspartic peptidase, retroviral-like 1	protein-coding
common_peak2-29783-6-9--0.75652998450706-1.11707584880836	chr6	88985288	88985716	+	0	NA	Intergenic	Intergenic	-60607	NM_175017	232217	Mm.281744	NM_175017	ENSMUSG00000055403	4933427D06Rik	-	RIKEN cDNA 4933427D06 gene	protein-coding
unique_peak1-1682-7-1-1.79909083029819-1.80617997398389	chr13	73627111	73627564	+	0	NA	intron (NM_145376, intron 3 of 13)	intron (NM_145376, intron 3 of 13)	22506	NM_145376	210992	Mm.284649	NM_145376	ENSMUSG00000021608	Lpcat1	2900035H07Rik|Aytl2|BB137372|BC005662|C87117|LPCAT|rd11	lysophosphatidylcholine acyltransferase 1	protein-coding
common_peak1-9317-13-11-0.193509529916613-0.379391706698377	chr11	94499448	94500153	+	0	NA	intron (NM_133807, intron 4 of 6)	intron (NM_133807, intron 4 of 6)	8662	NM_133807	98238	Mm.172720	NM_133807	ENSMUSG00000020869	Lrrc59	AA959742|C78668	leucine rich repeat containing 59	protein-coding
common_peak1-12384-17-20--0.174021084573723-0.306598483909156	chr17	66693538	66694403	+	0	NA	intron (NM_001114098, intron 12 of 14)	intron (NM_001114098, intron 12 of 14)	105120	NM_172963	68617	Mm.33421	NM_172963	ENSMUSG00000052105	Mtcl1	1110012J17Rik|Ccdc165|D130071O13|Kiaa0802|Soga2|mKIAA0802|t8219b25	microtubule crosslinking factor 1	protein-coding
unique_peak2-33114-5-7--0.704380336005853-1.01466476204226	chr10	81184263	81184784	+	0	NA	3' UTR (NM_001243067, exon 4 of 4)	3' UTR (NM_001243067, exon 4 of 4)	16953	NM_001243067	73610	Mm.490466	NM_001243067		Zfp433	1700123A16Rik	RIKEN cDNA 1700123A16 gene	protein-coding
unique_peak2-38180-0-5--3.42509343119537-1.32905871926422	chr6	93003409	93003792	+	0	NA	intron (NR_015530, intron 1 of 2)	(TC)n|Simple_repeat|Simple_repeat	113024	NR_015530	330385	Mm.483472	NR_015530	ENSMUSG00000097462	9530026P05Rik	B430306B02	RIKEN cDNA 9530026P05 gene	ncRNA
common_peak1-11241-39-47-0.0307987461979975-0.310078451983505	chr15	79878495	79879563	+	0	NA	Intergenic	Intergenic	29980	NR_028282	100302601		NR_028282		Snord83b	MBII-10	small nucleolar RNA, C/D box 83B	snoRNA
unique_peak2-39575-6-13--1.2419568116773-1.58711810488664	chr9	74952944	74953515	+	0	NA	intron (NM_010864, intron 1 of 40)	intron (NM_010864, intron 1 of 40)	34216	NM_010864	17918	Mm.3645	NM_010864	ENSMUSG00000034593	Myo5a	9630007J19Rik|AI413174|AI661011|Dbv|MVa|Myo5|MyoVA|Sev-1|d|d-120J|flail|flr	myosin VA	protein-coding
common_peak1-8847-63-57-0.580331595943018-1.66819226071312	chr11	30648810	30650019	+	0	NA	Intergenic	Intergenic	-22361	NM_134013	103554	Mm.240066	NM_134013	ENSMUSG00000040850	Psme4	AA409398|AU041366|TEMO|mKIAA0077	proteasome (prosome, macropain) activator subunit 4	protein-coding
unique_peak1-1376-30-8-1.99975040804956-4.4860419630448	chr12	51693539	51694831	+	0	NA	intron (NM_008858, intron 1 of 18)	intron (NM_008858, intron 1 of 18)	56025	NM_008858	18760	Mm.133719	NM_008858	ENSMUSG00000002688	Prkd1	PKD|PKD1|Pkcm|Prkcm	protein kinase D1	protein-coding
common_peak2-28011-108-158-0.0572940061237137-0.333974416276908	chr4	46451014	46452990	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-11987	NM_130889	67628	Mm.263913	NM_130889	ENSMUSG00000028333	Anp32b	2410015B15Rik|PAL31|PHAPI2a|Ssp29	acidic (leucine-rich) nuclear phosphoprotein 32 family, member B	protein-coding
unique_peak2-33575-4-9--1.34538860874061-1.36011389749466	chr11	86257798	86258184	+	0	NA	Intergenic	Intergenic	-40168	NM_029788	76892	Mm.262707	NM_029788	ENSMUSG00000020521	Rnft1	0610013E23Rik|AV007605	ring finger protein, transmembrane 1	protein-coding
common_peak1-10229-27-21-0.532114332257938-0.800403172662453	chr13	51945799	51946937	+	0	NA	Intergenic	B4|SINE|B4	4324	NM_011817	23882	Mm.281298	NM_011817	ENSMUSG00000021453	Gadd45g	AI327420|C86281|CR6|DDIT2|OIG37	growth arrest and DNA-damage-inducible 45 gamma	protein-coding
common_peak2-28909-37-61--0.428203238901056-0.759155512401768	chr5	92277664	92279287	+	0	NA	Intergenic	MTD|LTR|MaLR	-82149	NR_045383	73452	Mm.396233	NR_045383		1700063O14Rik	-	RIKEN cDNA 1700063O14 gene	ncRNA
unique_peak2-32452-5-12--1.40482005414695-1.62698961692433	chr1	9700495	9701070	+	0	NA	Intergenic	Intergenic	-10492	NM_008651	17864	Mm.479	NM_008651	ENSMUSG00000025912	Mybl1	A-myb|G1-419-6|repro9	myeloblastosis oncogene-like 1	protein-coding
unique_peak2-39084-9-11--0.395349094316936-0.344532117358383	chr8	75083332	75083970	+	0	NA	Intergenic	ORR1A2|LTR|MaLR	11296	NM_172396	66818	Mm.22565	NM_172396	ENSMUSG00000044600	Smim7	9130011J15Rik	small integral membrane protein 7	protein-coding
unique_peak1-3592-14-3-1.89921616035764-2.80787975886178	chr19	32137691	32138414	+	0	NA	intron (NM_018830, intron 2 of 23)	intron (NM_018830, intron 2 of 23)	39578	NM_018830	54447	Mm.491229	NM_018830	ENSMUSG00000024887	Asah2	AI585898	N-acylsphingosine amidohydrolase 2	protein-coding
common_peak1-14078-47-71--0.235083576675764-0.465693198848464	chr2	121412825	121414619	+	0	NA	intron (NM_172673, intron 2 of 14)	intron (NM_172673, intron 2 of 14)	81263	NM_001290986	241627	Mm.293284	NM_030234	ENSMUSG00000027242	Wdr76	5830411K18Rik|6030457D09|AA517836	WD repeat domain 76	protein-coding
common_peak1-8187-17-22--0.305265617851975-0.348739088570342	chr10	81559403	81560237	+	0	NA	Intergenic	Intergenic	-30938	NM_001163064	216177	Mm.482395	NM_001163064		AU041133	-	expressed sequence AU041133	protein-coding
common_peak2-26605-29-37--0.135637432828474-0.313095283157754	chr2	113848199	113849449	+	0	NA	intron (NR_028423, intron 3 of 4)	intron (NR_028423, intron 3 of 4)	-9469	NM_010290	14617	Mm.389394	NM_010290	ENSMUSG00000068615	Gjd2	Gja9|connexin36|cx36	gap junction protein, delta 2	protein-coding
common_peak1-12163-11-4-1.18676548936425-1.68134727924692	chr17	29347894	29348431	+	0	NA	intron (NM_153166, intron 4 of 20)	intron (NM_153166, intron 4 of 20)	26573	NM_153166	240058	Mm.39905	NM_153166	ENSMUSG00000024008	Cpne5	A830083G22Rik	copine V	protein-coding
common_peak2-25746-37-12-1.82555335334473-4.91898132744844	chr19	28792758	28793308	+	0	NA	intron (NR_045330, intron 4 of 4)	B2_Mm2|SINE|B2	-38466	NM_175459	226075	Mm.223508	NM_175459		Glis3	4833409N03Rik|E230012L24|E330013K21Rik	GLIS family zinc finger 3	protein-coding
common_peak1-10634-35-35-0.261445257020192-0.479515789778899	chr14	45529447	45530801	+	0	NA	Intergenic	Intergenic	50858	NR_045059	73895	Mm.318535	NR_045059		4930431P03Rik	-	RIKEN cDNA 4930431P03 gene	ncRNA
unique_peak2-33293-2-8--2.08737925770563-1.65811743852845	chr11	115933132	115933555	+	0	NA	intron (NM_001009573, intron 13 of 32)	intron (NM_001009573, intron 13 of 32)	5932	NM_001009573	70450	Mm.259460	NM_001009573	ENSMUSG00000057948	Unc13d	2610108D09Rik|Jinx|Munc13-4|mFLJ00067	unc-13 homolog D (C. elegans)	protein-coding
common_peak1-13229-72-58-0.785940763510476-2.96267322331898	chr19	27428921	27431089	+	0	NA	Intergenic	Lx8|LINE|L1	32896	NM_183179	240595	Mm.269759	NM_183179	ENSMUSG00000047298	Kcnv2	KV11.1	potassium channel, subfamily V, member 2	protein-coding
common_peak1-9213-33-68--0.77718689425264-1.89550965192595	chr11	83302458	83303519	+	0	NA	intron (NM_027427, intron 7 of 15)	intron (NM_027427, intron 7 of 15)	16378	NM_027427	70439	Mm.181050	NM_027427	ENSMUSG00000020680	Taf15	2610111C21Rik|68kDa|TAFII68|Taf2n	TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor	protein-coding
common_peak1-16529-203-263-0.422694037635432-3.22610772176545	chr5	142812834	142817634	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-62217	NM_199068	17425	Mm.24214	NM_010812	ENSMUSG00000056493	Foxk1	A630048H08Rik|AI463295|ENSMUSG00000075577|Gm10868|Mnf	forkhead box K1	protein-coding
common_peak2-23006-44-90--0.685901805630161-1.92348377315862	chr14	61647109	61648946	+	0	NA	intron (NM_013869, intron 1 of 9)	intron (NM_013869, intron 1 of 9)	8797	NM_001164155	29820	Mm.281356	NM_013869	ENSMUSG00000060548	Tnfrsf19	AL023044|AW123854|TAJ|TAJ-ALPHA|TRADE|Troy	tumor necrosis factor receptor superfamily, member 19	protein-coding
common_peak1-13540-18-24--0.330937038546373-0.380101753845076	chr2	3284254	3284950	+	0	NA	promoter-TSS (NM_145921)	promoter-TSS (NM_145921)	-761	NM_145921	99035	Mm.13808	NM_145921	ENSMUSG00000026645	Olah	AI607300|E230009B14Rik|Thedc1	oleoyl-ACP hydrolase	protein-coding
unique_peak2-32937-8-8--0.164702583494742-1.00793137938329	chr10	39614497	39614946	+	0	NA	non-coding (NR_033628, exon 2 of 4)	non-coding (NR_033628, exon 2 of 4)	4323	NR_033628	213332	Mm.484359	NR_033628		AA474331	-	expressed sequence AA474331	pseudo
common_peak1-13433-24-10-1.33377828413042-2.22881803703862	chr19	55244907	55245950	+	0	NA	Intergenic	Intergenic	-9947	NM_009348	21684	Mm.42139	NM_009348	ENSMUSG00000024979	Tectb	Tctnb	tectorin beta	protein-coding
common_peak2-20516-19-28--0.455293668465885-0.518921928796332	chr10	60830642	60831639	+	0	NA	intron (NM_013753, intron 1 of 19)	B4A|SINE|B4	15131	NM_013753	27355	Mm.269699	NM_013753	ENSMUSG00000020092	Pald1	MMPAL|Pald|mKIAA1274	phosphatase domain containing, paladin 1	protein-coding
common_peak2-22191-13-20--0.613845392140992-0.532159081577619	chr12	108711187	108712227	+	0	NA	Intergenic	Intergenic	261991	NR_045973	74968	Mm.359821	NR_045973	ENSMUSG00000085641	4930465M20Rik	4930431H15Rik	RIKEN cDNA 4930465M20 gene	ncRNA
common_peak2-21166-22-26--0.107603397076064-0.30528805757448	chr11	58977460	58978532	+	0	NA	promoter-TSS (NM_173785)	promoter-TSS (NM_173785)	-749	NM_173785	216792	Mm.266175	NM_173785	ENSMUSG00000049287	Iba57	4930543L23Rik|A230051G13Rik|C1orf69	IBA57, iron-sulfur cluster assembly homolog (S. cerevisiae)	protein-coding
common_peak2-27281-26-27-0.120544170100858-0.335332249061431	chr3	57470544	57471423	+	0	NA	TTS (NM_001033349)	TTS (NM_001033349)	-15377	NM_175095	52245	Mm.21901	NM_175095		Commd2	1190017G07Rik|AI047739|D3Ertd176e|HSPC042	COMM domain containing 2	protein-coding
unique_peak2-38272-6-5--0.0195643903408542-0.947717972411649	chr6	128594674	128595109	+	0	NA	Intergenic	Intergenic	-17512	NM_053165	94071	Mm.197689	NM_053165	ENSMUSG00000030364	Clec2h	Clrf|clr-f	C-type lectin domain family 2, member h	protein-coding
common_peak1-11277-43-61--0.171633124863172-0.368450600203475	chr15	82046545	82047897	+	0	NA	Intergenic	Intergenic	-3976	NM_001207021	435145	Mm.41289	NM_001207021	ENSMUSG00000096883	AI848285	Orf26	expressed sequence AI848285	protein-coding
common_peak2-25173-3-12--2.11442280810037-2.15846853396659	chr18	54846673	54847205	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	75541	NR_045400	328957	Mm.402781	NR_045400		9330117O12Rik	9330117O12	RIKEN cDNA 9330117O12 gene	ncRNA
common_peak2-31321-26-54--0.853460621366198-1.81099027427052	chr8	79710948	79712315	+	0	NA	intron (NM_001083906, intron 6 of 8)	intron (NM_001083906, intron 6 of 8)	285224	NM_001083906	110784	Mm.324393	NM_001083906	ENSMUSG00000031618	Nr3c2	MR|Mlr	nuclear receptor subfamily 3, group C, member 2	protein-coding
unique_peak1-1650-20-8-1.31814978314888-1.77631109801764	chr13	59451769	59452551	+	0	NA	Intergenic	Intergenic	193652	NM_001284221	67269	Mm.153008	NM_023328	ENSMUSG00000021557	Agtpbp1	1700020N17Rik|2310001G17Rik|2900054O13Rik|4930445M19Rik|5730402G09Rik|CCP1|Nna1|nmf243|pcd	ATP/GTP binding protein 1	protein-coding
unique_peak1-6366-9-0-3.18961340640422-3.01029995663981	chr7	66641205	66641626	+	0	NA	Intergenic	Intergenic	-61896	NR_015479	330544	Mm.9002	NR_015479		C230091D08Rik	-	RIKEN cDNA C230091D08 gene	ncRNA
common_peak1-8408-12-20--0.743541437691122-0.625923329873571	chr10	69925033	69925766	+	0	NA	intron (NM_024244, intron 3 of 13)	intron (NM_024244, intron 3 of 13)	21741	NM_001143776	71721	Mm.477813	NM_024244	ENSMUSG00000043259	Fam13c	1200015N20Rik|C030038O19Rik|mKIAA1796	family with sequence similarity 13, member C	protein-coding
unique_peak1-3951-8-6-0.197867495889966-1.03789460276074	chr2	29858521	29859019	+	0	NA	intron (NM_001177668, intron 23 of 55)	intron (NM_001177668, intron 23 of 55)	7300	NR_105963	102465603		NR_105963		Mir6997	mmu-mir-6997	microRNA mir-6997	ncRNA
common_peak2-30594-39-37-0.367833733475568-0.665814527695537	chr7	80947003	80948128	+	0	NA	Intergenic	Intergenic	13824	NR_077222	100579147	Mm.109205	NR_077222	ENSMUSG00000074067	Gm10619	4932443D20|ENSMUSG00000074067	predicted gene 10619	ncRNA
unique_peak1-222-19-6-1.59533240460408-2.21753093801298	chr1	88466637	88467516	+	0	NA	intron (NM_008801, intron 1 of 4)	intron (NM_008801, intron 1 of 4)	12000	NM_008801	18582	Mm.12925	NM_008801	ENSMUSG00000026239	Pde6d	AI841218|PrBP/delta	phosphodiesterase 6D, cGMP-specific, rod, delta	protein-coding
unique_peak2-34589-5-6--0.511735258063458-0.947717972411649	chr14	69763641	69763891	+	0	NA	Intergenic	B3|SINE|B2	-26093	NM_010920	18092	Mm.390691	NM_010920	ENSMUSG00000044186	Nkx2-6	AV044928|Nkx-2.6|Nkx2.6|Tix|tinman	NK2 homeobox 6	protein-coding
common_peak2-22062-12-15--0.351224014912361-0.332077462497413	chr12	71882589	71883378	+	0	NA	Intergenic	Intergenic	-43518	NM_028127	319710	Mm.2962	NM_028127	ENSMUSG00000048285	Frmd6	2610019M19Rik|4930488L10Rik|AW212977	FERM domain containing 6	protein-coding
common_peak2-23050-6-8--0.60452689106201-1.03789460276074	chr14	70099950	70100481	+	0	NA	intron (NM_001146012, intron 5 of 7)	intron (NM_001146012, intron 5 of 7)	7172	NM_001146012	71843	Mm.27738	NM_001146012	ENSMUSG00000034194	R3hcc1	1700020M16Rik|AA407796	R3H domain and coiled-coil containing 1	protein-coding
common_peak1-10080-11-8-0.338768582809301-1.14218153353838	chr13	23562917	23563474	+	0	NA	Intergenic	Intergenic	-5425	NM_013483	12231	Mm.1420	NM_013483	ENSMUSG00000000706	Btn1a1	Btn	butyrophilin, subfamily 1, member A1	protein-coding
unique_peak1-4186-14-6-1.09186123830004-1.16633110333236	chr2	117597047	117597794	+	0	NA	Intergenic	L1Md_A|LINE|L1	-50244	NR_040631	73938	Mm.399107	NR_040631	ENSMUSG00000086221	4930412B13Rik	-	RIKEN cDNA 4930412B13 gene	ncRNA
unique_peak1-1947-12-1-2.64877598508764-3.36932189928148	chr14	98847369	98848094	+	0	NA	Intergenic	Intergenic	-278747	NM_007826	13134	Mm.320593	NM_007826	ENSMUSG00000055639	Dach1	Dac|Dach	dachshund 1 (Drosophila)	protein-coding
common_peak1-10666-17-10-0.75886471956774-0.917676348953458	chr14	50896554	50897361	+	0	NA	Intergenic	Lx9|LINE|L1	4989	NM_146665	258659	Mm.377622	NM_146665	ENSMUSG00000091873	Olfr732	MOR241-1	olfactory receptor 732	protein-coding
common_peak2-27372-22-25--0.0531556130536872-0.301029995663976	chr3	85970653	85971873	+	0	NA	Intergenic	Intergenic	-24673	NM_016959	20091	Mm.399829	NM_016959	ENSMUSG00000028081	Rps3a1	Rps3a	ribosomal protein S3A1	protein-coding
unique_peak2-33178-2-6--1.72480917832092-1.26211192963361	chr10	95689892	95690166	+	0	NA	intron (NR_110448, intron 1 of 2)	L1MA5|LINE|L1	1188	NR_110448	74881	Mm.410819	NR_110448		4930459C07Rik	-	RIKEN cDNA 4930459C07 gene	ncRNA
unique_peak1-1431-8-2-1.42025991722641-1.65811743852845	chr12	86790737	86791257	+	0	NA	Intergenic	Intergenic	-23854	NM_010234	14281	Mm.246513	NM_010234	ENSMUSG00000021250	Fos	D12Rfj1|c-fos|cFos	FBJ osteosarcoma oncogene	protein-coding
common_peak1-12637-102-158--0.0417944784448014-0.312166056686052	chr18	34930917	34933154	+	0	NA	3' UTR (NM_175104, exon 5 of 5)	3' UTR (NM_175104, exon 5 of 5)	-4627	NM_001081256	277250	Mm.277906	NM_029518	ENSMUSG00000038773	Kdm3b	5830462I21Rik|JHDM2B|Jmjd1b|mKIAA1082	KDM3B lysine (K)-specific demethylase 3B	protein-coding
common_peak1-10131-13-11-0.193509529916613-0.379391706698377	chr13	32963496	32964114	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-20751	NM_025429	66222	Mm.20144	NM_025429	ENSMUSG00000044734	Serpinb1a	1190005M04Rik|AI325983|EI|EIA|ELANH2|LEI|M/NEI|MNEI|PI2	serine (or cysteine) peptidase inhibitor, clade B, member 1a	protein-coding
unique_peak2-39486-6-12--1.13504160776079-1.45089835786865	chr9	58354211	58354849	+	0	NA	Intergenic	Intergenic	18120	NM_176921	319477	Mm.153674	NM_176921	ENSMUSG00000066607	6030419C18Rik	-	RIKEN cDNA 6030419C18 gene	protein-coding
common_peak1-15737-36-73--0.730132279461196-1.75762453057467	chr4	148151195	148152061	+	0	NA	Intergenic	Intergenic	-26873	NM_001159344	69743	Mm.233879	NM_027195	ENSMUSG00000028977	Casz1	2410019P08Rik|AV096627|BC040081|Cst|D4Ertd432e	castor zinc finger 1	protein-coding
common_peak2-29632-22-19-0.325356010200042-0.479250674391597	chr6	56831755	56832578	+	0	NA	TTS (NM_001252374)	TTS (NM_001252374)	19714	NM_001252374	107569	Mm.158936	NM_026004	ENSMUSG00000029780	Nt5c3	1600024P05Rik|2610206B05Rik|3110004A18Rik|AI842776|Nt5c3a|Nt5y|PN-1|PN-I|PSN1|UMPH|Umph-1|Umph1|cN-III|lupin|p36	5'-nucleotidase, cytosolic III	protein-coding
common_peak2-28652-2-6--1.72480917832092-1.26211192963361	chr5	31047713	31048145	+	0	NA	intron (NM_023047, intron 2 of 12)	intron (NM_023047, intron 2 of 12)	33661	NM_023047	65254	Mm.27732	NM_023047	ENSMUSG00000029168	Dpysl5	CRAM|CRMP-5|Crmp5	dihydropyrimidinase-like 5	protein-coding
common_peak2-20962-18-30--0.641277159158523-0.738267116931589	chr11	20112379	20112908	+	0	NA	intron (NM_008996, intron 1 of 5)	intron (NM_008996, intron 1 of 5)	11038	NM_008996	19324	Mm.271944	NM_008996	ENSMUSG00000020149	Rab1	Gtbp|Rab-1|Rab1A|Ypt1|mKIAA3012	RAB1, member RAS oncogene family	protein-coding
common_peak2-22777-18-12-0.612479433087259-0.739965416525508	chr14	33341398	33341844	+	0	NA	intron (NM_001081221, intron 5 of 20)	intron (NM_001081221, intron 5 of 20)	14914	NM_001081221	319955	Mm.318310	NM_177043	ENSMUSG00000054051	Ercc6	4732403I04|C130058G22Rik|CSB	excision repair cross-complementing rodent repair deficiency, complementation group 6	protein-coding
common_peak2-31757-12-13--0.158578936969966-0.301029995663979	chr9	21002566	21003390	+	0	NA	intron (NM_019798, intron 1 of 9)	intron (NM_019798, intron 1 of 9)	1829	NM_019798	18577	Mm.191749	NM_019798	ENSMUSG00000032177	Pde4a	D9Ertd60e|Dpde2	phosphodiesterase 4A, cAMP specific	protein-coding
unique_peak2-39240-7-11--0.785871670422967-1.21681515183528	chr8	111746132	111746742	+	0	NA	Intergenic	ORR1E|LTR|MaLR	118371	NR_002928	384864	Mm.390083	NR_002928		Gm1943	-	WD repeat domain 70 pseudogene	pseudo
unique_peak2-34587-4-7--1.02346051385325-1.09384600808989	chr14	69555484	69555878	+	0	NA	Intergenic	Intergenic	-91665	NM_009285	20855	Mm.20911	NM_009285	ENSMUSG00000014813	Stc1	Stc	stanniocalcin 1	protein-coding
unique_peak1-6052-50-15-2.04094031647895-7.82844174687435	chr6	115534709	115536384	+	0	NA	exon (NM_001101431, exon 4 of 4)	exon (NM_001101431, exon 4 of 4)	7048	NM_001101431	70291	Mm.133694	NM_001101431		Mkrn2os	2510049J12Rik	makorin, ring finger protein 2, opposite strand	protein-coding
common_peak1-18266-94-200--0.521462123329612-2.61232085480036	chr8	34806463	34808703	+	0	NA	intron (NM_010344, intron 12 of 12)	intron (NM_010344, intron 12 of 12)	-34803	NM_001167921	68153	Mm.286104	NM_026584	ENSMUSG00000031585	Gtf2e2	34kDa|AI462509|C330006J08Rik	general transcription factor II E, polypeptide 2 (beta subunit)	protein-coding
common_peak1-18394-9-14--0.717277189204299-0.53895475198017	chr8	71592265	71592774	+	0	NA	intron (NM_153054, intron 5 of 16)	MTD|LTR|MaLR	-20116	NM_007509	11966	Mm.249096	NM_007509	ENSMUSG00000006273	Atp6v1b2	AI194269|AI790362|Atp6b2|HO57|R74844	ATPase, H+ transporting, lysosomal V1 subunit B2	protein-coding
common_peak2-30954-42-47-0.157366827146028-0.406463159098199	chr8	70695083	70697265	+	0	NA	Intergenic	L1Md_F|LINE|L1	-104253	NM_028182	72281	Mm.40974	NM_028182	ENSMUSG00000053886	Sh2d4a	2210402M20Rik|SH2A	SH2 domain containing 4A	protein-coding
unique_peak1-3778-17-7-1.21829633820504-1.55050753388977	chr19	55719867	55720594	+	0	NA	intron (NR_045318, intron 2 of 3)	intron (NR_045318, intron 2 of 3)	56464	NR_045318	77594	Mm.329924	NR_045318	ENSMUSG00000097632	4930552P12Rik	-	RIKEN cDNA 4930552P12 gene	ncRNA
unique_peak2-33686-12-43--1.81065563354966-3.98058741041078	chr11	103174261	103175565	+	0	NA	Intergenic	Intergenic	31103	NM_133715	544817	Mm.259113	NM_133715	ENSMUSG00000034255	Arhgap27	2310069I04Rik|5730442P18Rik|Gm21552|Sh3d20	Rho GTPase activating protein 27	protein-coding
common_peak2-25873-61-47-0.797786829028184-2.49437462228564	chr19	43916843	43917791	+	0	NA	Intergenic	Intergenic	4024	NR_033472	100038628	Mm.212585	NR_033472	ENSMUSG00000074828	Gm10768	ENSMUSG00000074828	predicted gene 10768	ncRNA
unique_peak2-35193-5-12--1.40482005414695-1.62698961692433	chr16	58512385	58512806	+	0	NA	intron (NM_018784, intron 1 of 10)	intron (NM_018784, intron 1 of 10)	10830	NM_018784	54613	Mm.212742	NM_018784	ENSMUSG00000022747	St3gal6	1700023B24Rik|AI930218|AW552396|Siat10|St3galVI	ST3 beta-galactoside alpha-2,3-sialyltransferase 6	protein-coding
common_peak1-16807-41-55--0.106206217208944-0.319297110585551	chr6	47757716	47758947	+	0	NA	exon (NM_009787, exon 2 of 10)	exon (NM_009787, exon 2 of 10)	-4680	NR_030485	735289		NR_030485		Mir704	Mirn704|mmu-mir-704	microRNA 704	ncRNA
common_peak2-27659-32-35-0.109167017777348-0.348003640999429	chr3	108561647	108562691	+	0	NA	intron (NM_177859, intron 5 of 11)	B1_Mur3|SINE|Alu	19593	NM_177859	329738	Mm.72322	NM_177859	ENSMUSG00000049565	Aknad1	4921525H12Rik	AKNA domain containing 1	protein-coding
common_peak2-25563-20-10-1.0286431659539-1.30248952876293	chr19	6546197	6546768	+	0	NA	Intergenic	Intergenic	-3412	NM_009203	20521	Mm.391146	NM_009203	ENSMUSG00000061742	Slc22a12	AI987855|OAT4L|Rst|Slc22al2|URAT1	solute carrier family 22 (organic anion/cation transporter), member 12	protein-coding
common_peak2-21861-23-26--0.0331199976543877-0.301029995663988	chr12	25100046	25101214	+	0	NA	Intergenic	Intergenic	-82816	NM_020614	21340	Mm.39082	NM_020614	ENSMUSG00000059669	Taf1b	4930408G01Rik|A230108M10Rik|TAFI68|Tafi86	TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B	protein-coding
common_peak2-30353-22-39--0.674643989799958-0.97145127402441	chr7	27591587	27592598	+	0	NA	Intergenic	Intergenic	-1854	NM_013809	13108	Mm.102312	NM_013809	ENSMUSG00000049685	Cyp2g1	-	cytochrome P450, family 2, subfamily g, polypeptide 1	protein-coding
common_peak2-22546-13-10-0.319040412000471-0.446472590016315	chr13	59453282	59453916	+	0	NA	Intergenic	L1MA6|LINE|L1	192213	NM_001284221	67269	Mm.153008	NM_023328	ENSMUSG00000021557	Agtpbp1	1700020N17Rik|2310001G17Rik|2900054O13Rik|4930445M19Rik|5730402G09Rik|CCP1|Nna1|nmf243|pcd	ATP/GTP binding protein 1	protein-coding
common_peak1-13766-41-65--0.343245414509793-0.615335714844035	chr2	35199940	35201257	+	0	NA	Intergenic	Intergenic	-8069	NM_013515	13830	Mm.295284	NM_013515	ENSMUSG00000026880	Stom	Epb7.2	stomatin	protein-coding
common_peak1-13152-54-28-1.31510476650216-4.65239418269556	chr19	10296230	10298053	+	0	NA	intron (NM_001033481, intron 7 of 25)	intron (NM_001033481, intron 7 of 25)	16618	NM_001163431	69038	Mm.375100	NM_026919	ENSMUSG00000036372	Tmem258	1810006K21Rik	transmembrane protein 258	protein-coding
common_peak1-12980-22-29--0.259606490521114-0.36542888694933	chr19	4120956	4121797	+	0	NA	exon (NM_016666, exon 2 of 7)	exon (NM_016666, exon 2 of 7)	199	NM_001276284	11632	Mm.10433	NM_016666	ENSMUSG00000024847	Aip	AA408703|AW476050|Ara9|D19Bwg1412e|Fkbp16|Xap2	aryl-hydrocarbon receptor-interacting protein	protein-coding
unique_peak2-34312-6-9--0.75652998450706-1.11707584880836	chr13	94190602	94191170	+	0	NA	Intergenic	Intergenic	78877	NM_021310	57748	Mm.100273	NM_021310	ENSMUSG00000021690	Jmy	-	junction-mediating and regulatory protein	protein-coding
common_peak1-11496-32-47--0.305870481501496-0.462861812831739	chr15	102670272	102671364	+	0	NA	Intergenic	Intergenic	-80744	NM_010464	15422	Mm.207062	NM_010464	ENSMUSG00000001655	Hoxc13	-	homeobox C13	protein-coding
unique_peak2-38043-5-10--1.16381195464315-1.33892459842472	chr6	38845477	38846010	+	0	NA	Intergenic	ID_B1|SINE|B4	-19554	NM_001294143	15258	Mm.23790	NM_010433	ENSMUSG00000061436	Hipk2	1110014O20Rik|B230339E18Rik|Stank	homeodomain interacting protein kinase 2	protein-coding
common_peak2-21918-30-13-1.36232048743427-2.74004546941311	chr12	16870508	16871366	+	0	NA	Intergenic	B4A|SINE|B4	-30847	NM_009072	19878	Mm.276024	NM_009072	ENSMUSG00000020580	Rock2	B230113H15Rik|ROKalpha|Rho-kinase|Rock-II|Rock2m|mKIAA0619	Rho-associated coiled-coil containing protein kinase 2	protein-coding
common_peak1-9542-54-52-0.445165307066535-1.00457410994136	chr11	116217780	116219115	+	0	NA	intron (NM_027258, intron 8 of 18)	intron (NM_027258, intron 8 of 18)	-21779	NM_008240	15223	Mm.378938	NM_008240	ENSMUSG00000034227	Foxj1	FKHL-13|HFH-4|Hfh4	forkhead box J1	protein-coding
common_peak1-16960-33-46--0.223251289152109-0.392002726290462	chr6	85451710	85452975	+	0	NA	intron (NM_001001160, intron 1 of 13)	intron (NM_001001160, intron 1 of 13)	646	NM_001001160	330369	Mm.38777	NM_001001160	ENSMUSG00000047013	Fbxo41	9630017H13|D6Ertd538e	F-box protein 41	protein-coding
common_peak1-8533-20-11-0.903112283870037-1.11267835143409	chr10	89533217	89534134	+	0	NA	intron (NM_001128086, intron 5 of 24)	intron (NM_001128086, intron 5 of 24)	197421	NM_001128086	77531	Mm.440605	NM_181398	ENSMUSG00000058589	Anks1b	AIDA-1b|C030032C09Rik|E530015N03Rik|ENSMUSG00000078431|Gm10937|Gm1555	ankyrin repeat and sterile alpha motif domain containing 1B	protein-coding
unique_peak2-37225-7-15--1.20090916970181-0.947446088118041	chr4	88779141	88779641	+	0	NA	Intergenic	Lx5|LINE|L1	-3883	NM_024433	66902	Mm.28500	NM_024433	ENSMUSG00000062937	Mtap	1300019I21Rik|MSAP	methylthioadenosine phosphorylase	protein-coding
common_peak2-23107-42-65--0.30206479149127-0.522142286192486	chr14	79066871	79067768	+	0	NA	intron (NM_001081336, intron 1 of 28)	L1Md_T|LINE|L1	-23061	NR_104044	380921	Mm.89591	NM_001081336	ENSMUSG00000034731	Dgkh	5930402B05Rik|D130015C16	diacylglycerol kinase, eta	protein-coding
common_peak1-12690-31-27-0.41788374875552-0.64171680596148	chr18	39396882	39398163	+	0	NA	intron (NM_175164, intron 14 of 22)	intron (NM_175164, intron 14 of 22)	244723	NM_175164	71302	Mm.329396	NM_175164	ENSMUSG00000036452	Arhgap26	1810044B20Rik|2610010G17Rik|4933432P15Rik|AI853435|mKIAA0621	Rho GTPase activating protein 26	protein-coding
common_peak2-20307-20-20-0.0957573618124323-0.321718508207528	chr10	60817221	60818282	+	0	NA	intron (NM_013753, intron 2 of 19)	B1_Mur1|SINE|Alu	28520	NM_013753	27355	Mm.269699	NM_013753	ENSMUSG00000020092	Pald1	MMPAL|Pald|mKIAA1274	phosphatase domain containing, paladin 1	protein-coding
common_peak2-23052-10-5-0.771452844287613-1.33892459842472	chr14	70173243	70173671	+	0	NA	intron (NM_020275, intron 3 of 7)	intron (NM_020275, intron 3 of 7)	6178	NM_020275	21933	Mm.193430	NM_020275	ENSMUSG00000022074	Tnfrsf10b	DR5|KILLER|Ly98|MK|TRAILR2|TRICK2A|TRICK2B|TRICKB	tumor necrosis factor receptor superfamily, member 10b	protein-coding
common_peak2-28037-32-43--0.180339599417637-0.343417008601348	chr4	56946524	56947458	+	0	NA	intron (NM_175518, intron 3 of 17)	intron (NM_175518, intron 3 of 17)	13310	NM_175518	242474	Mm.296632	NM_175518		Tmem245	A630051L19Rik|AI957324|D730040F13Rik	transmembrane protein 245	protein-coding
common_peak2-31556-34-35-0.212143525558954-0.439405572480892	chr8	113635463	113636054	+	0	NA	intron (NM_198308, intron 3 of 17)	B1_Mur1|SINE|Alu	17113	NM_198308	319518	Mm.28350	NM_198308		Pdpr	4930402E16Rik|AU018056|mKIAA1990	pyruvate dehydrogenase phosphatase regulatory subunit	protein-coding
unique_peak1-7321-13-4-1.45654393575041-2.23384849113406	chr9	120885989	120886622	+	0	NA	intron (NM_177589, intron 35 of 36)	intron (NM_177589, intron 35 of 36)	22101	NR_106058	102465661		NR_106058		Mir7090	mmu-mir-7090	microRNA mir-7090	ncRNA
common_peak2-22325-9-19--1.13231468848314-1.09394599973099	chr13	23535313	23535975	+	0	NA	Intergenic	Intergenic	-12758	NR_015492	320842	Mm.487476	NR_015492	ENSMUSG00000085024	C230035I16Rik	-	RIKEN cDNA C230035I16 gene	ncRNA
common_peak2-20096-6-8--0.60452689106201-1.03789460276074	chr1	157062237	157062637	+	0	NA	Intergenic	Intergenic	56604	NM_021433	58244	Mm.66264	NM_021433	ENSMUSG00000026470	Stx6	2310039E05Rik|2410005I16Rik|AA437559|AI415714|AI845861	syntaxin 6	protein-coding
unique_peak1-2612-7-1-1.79909083029819-1.80617997398389	chr16	33872206	33872581	+	0	NA	intron (NM_010580, intron 3 of 14)	intron (NM_010580, intron 3 of 14)	42642	NM_001145884	16419	Mm.6424	NM_010580	ENSMUSG00000022817	Itgb5	AA475909|AI874634|ESTM23|[b]-5|[b]5|[b]5A|[b]5B|beta-5|beta5	integrin beta 5	protein-coding
common_peak1-15726-44-32-0.777498715210082-1.84665509793009	chr4	141570181	141571630	+	0	NA	Intergenic	Intergenic	-3339	NM_177868	329977	Mm.252019	NM_028429	ENSMUSG00000051435	Fhad1	2900090M10Rik|B230311F11	forkhead-associated (FHA) phosphopeptide binding domain 1	protein-coding
unique_peak1-3851-9-3-1.18961340640422-1.57096726280955	chr2	5316399	5316876	+	0	NA	intron (NM_001290374, intron 2 of 9)	(TTAAA)n|Simple_repeat|Simple_repeat	257815	NM_028804	74186	Mm.274715	NM_028804	ENSMUSG00000026676	Ccdc3	2310045O21Rik	coiled-coil domain containing 3	protein-coding
common_peak1-14652-9-9--0.132314688483142-1.03275496310833	chr3	57429023	57429475	+	0	NA	Intergenic	RSINE1|SINE|B4	26357	NM_175095	52245	Mm.21901	NM_175095		Commd2	1190017G07Rik|AI047739|D3Ertd176e|HSPC042	COMM domain containing 2	protein-coding
unique_peak1-1698-6-0-2.5653981103803-2.10720996964787	chr13	90012339	90012776	+	0	NA	intron (NM_028012, intron 7 of 7)	intron (NM_028012, intron 7 of 7)	-130440	NM_001134475	13003	Mm.158700	NM_019389	ENSMUSG00000021614	Vcan	5430420N07Rik|9430051N09|Cspg2|DPEAAE|NG2|PG-M|PG-M(V0)|PG-M(V1)|hdf	versican	protein-coding
unique_peak2-35183-8-7-0.00522241794757061-1.00793137938329	chr16	52094729	52095119	+	0	NA	intron (NM_001033238, intron 3 of 17)	intron (NM_001033238, intron 3 of 17)	63262	NM_001033238	208650	Mm.328206	NM_001033238	ENSMUSG00000022637	Cblb	AI429560|AI851073|Cbl-b	Casitas B-lineage lymphoma b	protein-coding
unique_peak1-3127-10-6-0.549060422951165-1.21398586181642	chr18	35873452	35873967	+	0	NA	intron (NM_001033141, intron 7 of 8)	intron (NM_001033141, intron 7 of 8)	7436	NM_001033141	68545	Mm.329362	NM_001033141	ENSMUSG00000073599	Ecscr	1110006O17Rik|ARIA	endothelial cell surface expressed chemotaxis and apoptosis regulator	protein-coding
unique_peak1-4837-16-0-4.11826364226806-5.41853992195166	chr3	151352741	151353616	+	0	NA	Intergenic	Intergenic	59745	NM_133871	99899	Mm.30756	NM_133871	ENSMUSG00000028037	Ifi44	A430056A10Rik|AW261460|MTAP44|p44	interferon-induced protein 44	protein-coding
common_peak2-23383-21-24--0.0743669245084888-0.301029995663979	chr15	57853238	57854492	+	0	NA	TTS (NM_029418)	TTS (NM_029418)	11984	NM_029418	75758	Mm.455792	NM_029418	ENSMUSG00000022362	9130401M01Rik	AI849328	RIKEN cDNA 9130401M01 gene	protein-coding
common_peak2-27801-16-37--1.12966387117552-1.94848218498813	chr3	142439208	142440015	+	0	NA	intron (NM_145546, intron 2 of 6)	intron (NM_145546, intron 2 of 6)	11400	NM_145546	229906	Mm.271756	NM_145546	ENSMUSG00000028271	Gtf2b	-	general transcription factor IIB	protein-coding
common_peak1-18428-21-15-0.569489265266236-0.756118839439552	chr8	78742331	78743189	+	0	NA	Intergenic	Intergenic	681312	NR_028579	100039211	Mm.367571	NR_028579	ENSMUSG00000074235	Gm10649	ENSMUSG00000074235	predicted gene 10649	ncRNA
common_peak2-22388-14-13-0.0918612383000403-0.332077462497413	chr13	31626287	31626837	+	0	NA	Intergenic	Intergenic	-23477	NM_008239	15220	Mm.44235	NM_008239	ENSMUSG00000038415	Foxq1	HFH-1|Hfh1|Hfh1l|sa	forkhead box Q1	protein-coding
common_peak2-21193-12-15--0.351224014912361-0.332077462497413	chr11	60417519	60418087	+	0	NA	Intergenic	B2_Mm2|SINE|B2	66618	NM_172943	268420	Mm.262056	NM_172943	ENSMUSG00000042650	Alkbh5	AW050020|AW215868|Abh5|E130207K11|Ofoxd	alkB, alkylation repair homolog 5 (E. coli)	protein-coding
common_peak1-16675-94-35-1.959664566407-14.9499272639721	chr6	5508002	5511166	+	0	NA	Intergenic	Intergenic	-63306	NM_013743	27273	Mm.235547	NM_013743	ENSMUSG00000019577	Pdk4	AV005916	pyruvate dehydrogenase kinase, isoenzyme 4	protein-coding
common_peak1-16681-11-11--0.0762689164695427-0.301029995663976	chr6	8259201	8259804	+	0	NA	intron (NR_033518, intron 2 of 3)	intron (NR_033518, intron 2 of 3)	50214	NR_033518	100036521	Mm.446106	NR_033518	ENSMUSG00000089862	Gm16039	OTTMUSG00000029336	predicted gene 16039	ncRNA
common_peak1-19070-11-5-0.923731083530457-1.477227296591	chr9	70079442	70079972	+	0	NA	intron (NM_181072, intron 1 of 27)	intron (NM_181072, intron 1 of 27)	24550	NM_181072	71602	Mm.249311	NM_181072	ENSMUSG00000032220	Myo1e	2310020N23Rik|9130023P14Rik|AA407778|myosin-1e|myr 3	myosin IE	protein-coding
common_peak1-16467-10-8-0.186490343566457-1.078512453669	chr5	137045406	137045999	+	0	NA	Intergenic	Intergenic	-2342	NM_001291238	13047	Mm.320317	NM_009986	ENSMUSG00000029705	Cux1	CDP|Cutl1|Cux|Cux-1	cut-like homeobox 1	protein-coding
unique_peak1-1631-8-2-1.42025991722641-1.65811743852845	chr13	45476069	45476551	+	0	NA	Intergenic	MTC|LTR|MaLR	-8801	NM_153789	218203	Mm.212855	NM_153789	ENSMUSG00000038175	Mylip	9430057C20Rik|Mir	myosin regulatory light chain interacting protein	protein-coding
unique_peak2-34127-7-34--2.33019218664678-4.50509115191453	chr13	21831409	21832361	+	0	NA	Intergenic	Intergenic	4920	NM_178210	319159	Mm.486099	NM_178210		Hist1h4j	-	histone cluster 1, H4j	protein-coding
common_peak2-27399-18-14-0.406028555619833-0.532159081577619	chr3	88295970	88296773	+	0	NA	intron (NM_001002011, intron 1 of 11)	intron (NM_001002011, intron 1 of 11)	863	NM_019390	16905	Mm.243014	NM_019390	ENSMUSG00000028063	Lmna	Dhe	lamin A	protein-coding
unique_peak1-3202-11-3-1.50869358425161-1.95434855131066	chr18	54992651	54993155	+	0	NA	Intergenic	Intergenic	156931	NM_175751	269023	Mm.192984	NM_175751	ENSMUSG00000052713	Zfp608	4932417D18Rik|D430007A19Rik|Znf608	zinc finger protein 608	protein-coding
unique_peak1-6931-16-4-1.7963355473807-2.18192634393779	chr8	107251832	107252538	+	0	NA	Intergenic	Intergenic	-5718	NM_001190330	102022	Mm.212983	NM_133960	ENSMUSG00000055730	Ces2a	9130231C15Rik|AI266984|Ces6	carboxylesterase 2A	protein-coding
common_peak2-20456-84-115-0.0769530637614535-0.34593194661749	chr10	41518708	41520325	+	0	NA	intron (NM_026643, intron 1 of 10)	RLTR6-int|LTR|ERV1	9953	NM_001243075	103268	Mm.338605	NM_026643	ENSMUSG00000019813	Cep57l1	2410017P07Rik|4930484D11Rik|AI607327|cep57R	centrosomal protein 57-like 1	protein-coding
common_peak2-31350-14-8-0.729291158915332-0.771068449301682	chr8	84635807	84636282	+	0	NA	intron (NM_001297596, intron 24 of 24)	intron (NM_001297596, intron 24 of 24)	290441	NM_001254747	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak2-26606-10-13--0.450939577048835-0.386243247519795	chr2	114174949	114175551	+	0	NA	Intergenic	Intergenic	-148082	NM_175466	228491	Mm.132523	NM_175466	ENSMUSG00000040321	Zfp770	6430601A21Rik|Znf770	zinc finger protein 770	protein-coding
common_peak1-10372-17-15-0.218296338205038-0.403453972741633	chr13	92610354	92611114	+	0	NA	intron (NM_009027, intron 9 of 23)	intron (NM_009027, intron 9 of 23)	290715	NM_009027	19418	Mm.248630	NM_009027		Rasgrf2	6330417G04Rik|AW048350|Grf2|Ras-GRF2	RAS protein-specific guanine nucleotide-releasing factor 2	protein-coding
common_peak1-15079-18-33--0.774543690021988-1.00055860626307	chr3	127257152	127257973	+	0	NA	intron (NM_197997, intron 1 of 25)	B1_Mur2|SINE|Alu	1155	NM_197997	71643	Mm.274884	NM_197997	ENSMUSG00000051278	Zgrf1	4930422G04Rik|AI448607	zinc finger, GRF-type containing 1	protein-coding
common_peak2-32234-9-8-0.0196884049619079-1.03275496310833	chr9	123851499	123852050	+	0	NA	Intergenic	Intergenic	14914	NM_009878	12581	Mm.29020	NM_009878	ENSMUSG00000096472	Cdkn2d	INK4d|p19|p19INK4d	cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)	protein-coding
unique_peak1-1107-13-2-2.19350952991661-3.03832868024006	chr11	90249486	90250043	+	0	NA	intron (NM_172563, intron 1 of 3)	intron (NM_172563, intron 1 of 3)	2467	NM_172563	217082	Mm.158903	NM_172563	ENSMUSG00000003949	Hlf	E230015K02Rik	hepatic leukemia factor	protein-coding
common_peak1-9957-16-22--0.405298313788951-0.440610794044987	chr12	111759228	111760105	+	0	NA	intron (NM_001081457, intron 1 of 12)	Charlie1a|DNA|MER1_type	35717	NM_012023	26931	Mm.240396	NM_012023	ENSMUSG00000017843	Ppp2r5c	2610043M05Rik|2700063L20Rik|AI060890|AW545884|C85228|D12Bwg0916e|mKIAA0044	protein phosphatase 2, regulatory subunit B', gamma	protein-coding
common_peak1-17268-33-46--0.223251289152109-0.392002726290462	chr6	134919280	134920355	+	0	NA	Intergenic	B3A|SINE|B2	-12202	NM_001109914	381823	Mm.296104	NM_001109914	ENSMUSG00000090698	Apold1	Gm1075	apolipoprotein L domain containing 1	protein-coding
common_peak1-12353-45-62--0.116921898155045-0.329988325168877	chr17	56584018	56585718	+	0	NA	intron (NM_001252456, intron 6 of 28)	L1MEf|LINE|L1	16776	NM_001252456	19280	Mm.258771	NM_011218	ENSMUSG00000013236	Ptprs	AL022616|PTP|PTP-NU3|PTPNU-3|PTPsigma|Ptpt9|R-PTP-S|RPTPsigma	protein tyrosine phosphatase, receptor type, S	protein-coding
common_peak1-11573-14-10-0.439784541720347-0.519648556297791	chr16	13780062	13780612	+	0	NA	promoter-TSS (NM_001039521)	promoter-TSS (NM_001039521)	-455	NM_001039521	106298	Mm.490362	NM_001039521	ENSMUSG00000022682	Rrn3	AL023001|E130302O19Rik|R75565|TIF-1A|Tif1a	RRN3 RNA polymerase I transcription factor homolog (yeast)	protein-coding
common_peak1-14452-75-25-2.03862727360219-12.2137949332557	chr3	107741134	107743992	+	0	NA	intron (NM_008184, intron 7 of 7)	intron (NM_008184, intron 7 of 7)	4104	NM_008184	14867	Mm.458154	NM_008184	ENSMUSG00000068762	Gstm6	-	glutathione S-transferase, mu 6	protein-coding
common_peak1-11988-43-27-0.975208263466099-2.41952329912175	chr17	12195075	12196569	+	0	NA	intron (NM_016694, intron 9 of 11)	intron (NM_016694, intron 9 of 11)	-116328	NM_026644	68262	Mm.258300	NM_026644	ENSMUSG00000023827	Agpat4	1500003P24Rik	1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)	protein-coding
unique_peak1-4963-7-3-0.799090830298189-1.23214870625617	chr4	101312763	101313289	+	0	NA	intron (NM_001164585, intron 19 of 19)	intron (NM_001164585, intron 19 of 19)	-7362	NM_175036	230514	Mm.4756	NM_175036	ENSMUSG00000035212	Leprot	LEPR|OB-RGRP|Obrgrp|VPS55	leptin receptor overlapping transcript	protein-coding
common_peak2-21452-11-6-0.701338662194009-1.32595962126035	chr11	86853267	86853768	+	0	NA	intron (NM_025638, intron 7 of 9)	RSINE1|SINE|B4	34122	NM_025638	66569	Mm.281887	NM_025638	ENSMUSG00000061666	Gdpd1	2610020H15Rik	glycerophosphodiester phosphodiesterase domain containing 1	protein-coding
common_peak1-12878-68-80-0.230110776413672-0.580562178555123	chr18	77712826	77714601	+	0	NA	intron (NM_001164504, intron 3 of 7)	intron (NM_001164504, intron 3 of 7)	90162	NM_001164504	225743	Mm.23293	NM_001164504	ENSMUSG00000025427	Rnf165	2900024M11Rik|AI427432|Ark2c|G630064H08Rik|Gm96	ring finger protein 165	protein-coding
common_peak1-19285-27-72--1.19827860798478-3.72942130693321	chr9	119894496	119895558	+	0	NA	Intergenic	ID4|SINE|ID	-1251	NM_153287	215418	Mm.491094	NM_153287	ENSMUSG00000032515	Csrnp1	4931429D10Rik|Axud1|CSRNP-1|URAX1|taip-3	cysteine-serine-rich nuclear protein 1	protein-coding
unique_peak1-3712-34-4-3.0601404321139-8.24625970087838	chr19	44741080	44742439	+	0	NA	Intergenic	Intergenic	-90125	NM_011037	18504	Mm.192158	NM_011037	ENSMUSG00000004231	Pax2	Opdc|Pax-2	paired box 2	protein-coding
unique_peak1-3175-12-3-1.64877598508764-2.36932189928148	chr18	39729634	39730284	+	0	NA	Intergenic	Intergenic	-83060	NM_008173	14815	Mm.129481	NM_008173	ENSMUSG00000024431	Nr3c1	GR|Grl-1|Grl1	nuclear receptor subfamily 3, group C, member 1	protein-coding
common_peak1-8756-9-10--0.269818212233077-1.05503135781948	chr11	4895172	4895697	+	0	NA	intron (NM_007454, intron 1 of 20)	L2a|LINE|L2	8607	NM_007454	11764	Mm.274816	NM_007454	ENSMUSG00000009090	Ap1b1	Adtb1|b2b1660Clo	adaptor protein complex AP-1, beta 1 subunit	protein-coding
common_peak1-17546-22-13-0.8399291830298-1.1381569562463	chr7	29489919	29490764	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-11468	NM_015796	50760	Mm.358659	NM_015796	ENSMUSG00000030598	Fbxo17	Fbg4|Fbx17|Fbxo26	F-box protein 17	protein-coding
common_peak1-11037-75-97-0.124357147628077-0.407517392375985	chr15	43281814	43283059	+	0	NA	intron (NR_046064, intron 1 of 2)	intron (NR_046064, intron 1 of 2)	26146	NR_046064	100038728	Mm.244168	NR_046064	ENSMUSG00000072592	Gm10373	ENSMUSG00000072592	predicted gene 10373	ncRNA
unique_peak1-4979-13-3-1.77847203063777-2.58603100924543	chr4	109204657	109205442	+	0	NA	Intergenic	B3A|SINE|B2	-1147	NM_026291	67646	Mm.45820	NM_026291	ENSMUSG00000060491	4930522H14Rik	1700007J23Rik	RIKEN cDNA 4930522H14 gene	protein-coding
common_peak2-24886-13-14--0.12841856497075-0.301029995663977	chr17	83862252	83862793	+	0	NA	intron (NM_001286567, intron 19 of 23)	intron (NM_001286567, intron 19 of 23)	51151	NM_009187	20463	Mm.30072	NM_009187	ENSMUSG00000024248	Cox7a2l	COX7AR|COX7RP|EB1|SIG-81|SIG81|Silg81	cytochrome c oxidase subunit VIIa polypeptide 2-like	protein-coding
common_peak1-11212-119-137-0.429913464351875-1.92142920714386	chr15	78875741	78878010	+	0	NA	Intergenic	B2_Mm1a|SINE|B2	4560	NM_015738	14429	Mm.390805	NM_015738	ENSMUSG00000006378	Galr3	Galnr3	galanin receptor 3	protein-coding
common_peak2-24786-8-8--0.164702583494742-1.00793137938329	chr17	64600792	64601258	+	0	NA	Intergenic	Intergenic	80198	NM_144859	224938	Mm.489681	NM_144859	ENSMUSG00000024083	Pja2	AI447901|AL022700|Neurodap1|mKIAA0438	praja 2, RING-H2 motif containing	protein-coding
common_peak2-27954-22-35--0.522640896354908-0.664636481544818	chr4	34882258	34883104	+	0	NA	Intergenic	RLTR13A2|LTR|ERVK	-23951	NR_040652	73696	Mm.1361	NR_040652	ENSMUSG00000085824	2410114N07Rik	-	RIKEN cDNA 2410114N07 gene	ncRNA
unique_peak1-3303-11-2-1.92373108353046-2.32232533660526	chr18	76204623	76205188	+	0	NA	intron (NM_145356, intron 3 of 4)	Charlie4z|DNA|MER1_type	53220	NR_045365	73009	Mm.443541	NR_045365		2900057B20Rik	-	RIKEN cDNA 2900057B20 gene	ncRNA
unique_peak2-35039-5-6--0.511735258063458-0.947717972411649	chr16	46497535	46497914	+	0	NA	promoter-TSS (NM_021496)	promoter-TSS (NM_021496)	-644	NM_021497	58998	Mm.328072	NM_021495	ENSMUSG00000022656	Pvrl3	2610301B19Rik|3000002N23Rik|4921513D19Rik|AA407785|AU016832|AW538082|CD113	poliovirus receptor-related 3	protein-coding
unique_peak2-33274-3-5--0.998945590680433-0.96108193396963	chr10	128891338	128891723	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-8204	NM_001011822	258069	Mm.376120	NM_001011822	ENSMUSG00000096497	Olfr787	MOR111-10	olfactory receptor 787	protein-coding
unique_peak2-32774-4-12--1.72390023199434-1.85743853830261	chr1	176835553	176836143	+	0	NA	intron (NM_011825, intron 1 of 1)	intron (NM_011825, intron 1 of 1)	16102	NM_011825	23893	Mm.25760	NM_011825	ENSMUSG00000050069	Grem2	Gremlin2|Prdc	gremlin 2 homolog, cysteine knot superfamily (Xenopus laevis)	protein-coding
unique_peak1-3314-9-3-1.18961340640422-1.57096726280955	chr18	78547737	78548177	+	0	NA	intron (NM_207651, intron 2 of 21)	intron (NM_207651, intron 2 of 21)	-144778	NM_001110274	27411	Mm.44158	NM_030683	ENSMUSG00000024552	Slc14a2	UT-A1|UT-A3	solute carrier family 14 (urea transporter), member 2	protein-coding
common_peak1-8368-10-8-0.186490343566457-1.078512453669	chr10	59921170	59921785	+	0	NA	intron (NR_045556, intron 14 of 68)	URR1A|DNA|MER1_type	59003	NM_001164374	100302688	Mm.444135	NM_001164374	ENSMUSG00000090439	Gm17455	-	predicted gene, 17455	protein-coding
unique_peak1-1972-10-4-1.03448725012141-1.5150158574804	chr14	120137483	120138087	+	0	NA	intron (NM_015820, intron 1 of 1)	intron (NM_015820, intron 1 of 1)	-10664	NR_045621	75432	Mm.443277	NR_045621		1700006F04Rik	-	RIKEN cDNA 1700006F04 gene	ncRNA
unique_peak1-4766-11-5-0.923731083530457-1.477227296591	chr3	122361696	122362252	+	0	NA	Intergenic	Intergenic	-39342	NM_153118	214459	Mm.209491	NM_153118	ENSMUSG00000039735	Fnbp1l	2610318I01Rik|AW548221|TOCA1|toca-1	formin binding protein 1-like	protein-coding
common_peak2-19816-3-6--1.22133801201688-1.08602067057793	chr1	88464909	88465138	+	0	NA	intron (NM_008801, intron 1 of 4)	(CAAAA)n|Simple_repeat|Simple_repeat	14053	NM_008801	18582	Mm.12925	NM_008801	ENSMUSG00000026239	Pde6d	AI841218|PrBP/delta	phosphodiesterase 6D, cGMP-specific, rod, delta	protein-coding
unique_peak2-37925-6-5--0.0195643903408542-0.947717972411649	chr5	145203617	145203996	+	0	NA	Intergenic	Intergenic	84412	NR_102373	100579137		NR_102372		Dmr	-	Dmrt1 related	ncRNA
unique_peak2-39258-12-12--0.0516637330534535-0.309718203022949	chr8	119344412	119345023	+	0	NA	Intergenic	Intergenic	-19405	NR_046193	78213	Mm.402039	NR_046193		4930563M20Rik	-	RIKEN cDNA 4930563M20 gene	ncRNA
unique_peak2-36664-2-4--1.23938235115068-0.931118710592187	chr3	27469462	27469847	+	0	NA	intron (NM_173182, intron 3 of 25)	B3|SINE|B2	14263	NR_037275	100526525		NR_037275		Mir3092	mmu-mir-3092	microRNA 3092	ncRNA
unique_peak2-33492-8-9--0.316705676939792-1.03275496310833	chr11	71003891	71004442	+	0	NA	intron (NM_001162414, intron 1 of 13)	L1Md_F2|LINE|L1	10792	NM_001162414	637515	Mm.390402	NM_001039680	ENSMUSG00000070390	Nlrp1b	ENSMUSG00000070390|Nalp1b|OTTMUSG00000006087|OTTMUSG00000006089	NLR family, pyrin domain containing 1B	protein-coding
unique_peak2-34981-8-20--1.38709500483119-1.45476480588849	chr15	98997759	98998460	+	0	NA	intron (NM_139140, intron 3 of 12)	B1_Mur4|SINE|Alu	40833	NM_139140	72572	Mm.276650	NM_139140	ENSMUSG00000051934	Spats2	2700012F11Rik|59kDa|Scr59|p59	spermatogenesis associated, serine-rich 2	protein-coding
common_peak2-21144-19-23--0.18227517405947-0.320777457303847	chr11	55428230	55429022	+	0	NA	Intergenic	Tigger5|DNA|MER2_type	-6926	NM_020492	14654	Mm.89320	NM_020492		Glra1	nmf11|oscillator|ot|spasmodic|spd	glycine receptor, alpha 1 subunit	protein-coding
unique_peak1-6904-10-2-1.77145284428761-2.09384600808989	chr8	104509113	104509593	+	0	NA	Intergenic	RMER19B|LTR|ERVK	799658	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
unique_peak1-6848-12-2-2.06381348436648-2.79529063155376	chr8	84742288	84742957	+	0	NA	Intergenic	Intergenic	183863	NM_001254747	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak1-13662-9-5-0.604650905683064-1.21398586181642	chr2	27328811	27329376	+	0	NA	intron (NM_001113574, intron 1 of 12)	intron (NM_001113574, intron 1 of 12)	1825	NM_023336	67382	Mm.28721	NM_023336	ENSMUSG00000026918	Brd3	2410084F24Rik|AW060456|Fsrg2|ORFX|RINGL3	bromodomain containing 3	protein-coding
unique_peak1-4451-9-3-1.18961340640422-1.57096726280955	chr2	173252775	173253286	+	0	NA	Intergenic	Intergenic	-95063	NM_028158	72221	Mm.46132	NM_028158	ENSMUSG00000027518	1700021F07Rik	-	RIKEN cDNA 1700021F07 gene	protein-coding
unique_peak1-2688-12-0-3.64877598508764-4.21441993929574	chr16	76610197	76610871	+	0	NA	Intergenic	Intergenic	-237240	NM_173440	268903	Mm.74711	NM_173440	ENSMUSG00000048490	Nrip1	6030458L20Rik|8430438I05Rik|9630050P12|AA959574|AW456757|RIP140	nuclear receptor interacting protein 1	protein-coding
common_peak2-19747-7-6--0.00826409175941478-0.97990265578305	chr1	75124657	75124948	+	0	NA	intron (NM_194333, intron 10 of 11)	MTD|LTR|MaLR	-3002	NM_029342	75570	Mm.442409	NM_029342		Nhej1	1700029B21Rik|XLF|cernunnos	nonhomologous end-joining factor 1	protein-coding
common_peak1-16111-56-82--0.139443605907681-0.368824536501612	chr5	65536354	65538279	+	0	NA	intron (NM_175174, intron 4 of 10)	MIRc|SINE|MIR	14846	NM_175174	71778	Mm.10281	NM_175174	ENSMUSG00000054920	Klhl5	1300013C10Rik	kelch-like 5	protein-coding
common_peak1-7440-15-22--0.511397205501357-0.50761186003982	chr1	10993331	10994017	+	0	NA	intron (NM_029525, intron 1 of 39)	RMER13B|LTR|ERVK	10128	NM_029525	109294	Mm.123247	NM_029525	ENSMUSG00000048960	Prex2	6230420N16Rik|AI316880|AI553603|C030045D06Rik|D430013K02|Depdc2|P-Rex2	phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2	protein-coding
common_peak1-15826-21-17-0.399564263823923-0.561823156887258	chr5	115326969	115327883	+	0	NA	intron (NM_026263, intron 9 of 11)	intron (NM_026263, intron 9 of 11)	-19517	NM_011854	23962	Mm.228363	NM_011854	ENSMUSG00000029561	Oasl2	M1204|Mmu-OASL|Oasl	2'-5' oligoadenylate synthetase-like 2	protein-coding
common_peak2-30243-22-44--0.84456899124227-1.45193041780123	chr7	5020035	5021097	+	0	NA	intron (NM_001205231, intron 5 of 11)	C-rich|Low_complexity|Low_complexity	6821	NM_001205231	22185	Mm.360389	NM_133671	ENSMUSG00000030435	U2af2	65kDa	U2 small nuclear ribonucleoprotein auxiliary factor (U2AF) 2	protein-coding
unique_peak2-36183-7-8--0.370834171144123-1.00793137938329	chr2	30286433	30286923	+	0	NA	intron (NM_138748, intron 3 of 9)	MTEb|LTR|MaLR	15108	NM_138748	110854	Mm.275393	NM_138748	ENSMUSG00000039515	Ppp2r4	2610042B21Rik|C77440|N28142|PR53	protein phosphatase 2A activator, regulatory subunit B	protein-coding
unique_peak2-35245-1-7--2.62705701021674-1.80617997398389	chr16	97670450	97670778	+	0	NA	intron (NM_010846, intron 10 of 10)	intron (NM_010846, intron 10 of 10)	13898	NM_010846	17857	Mm.33996	NM_010846	ENSMUSG00000000386	Mx1	AI893580|Mx|Mx-1	MX dynamin-like GTPase 1	protein-coding
unique_peak1-5082-11-1-2.50869358425161-2.83420869758413	chr4	144947652	144948168	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-42860	NM_009401	21941	Mm.12810	NM_009401	ENSMUSG00000028602	Tnfrsf8	Cd30|D1S166E|Ki|Ki-1	tumor necrosis factor receptor superfamily, member 8	protein-coding
unique_peak1-4602-7-0-2.79909083029819-2.40823996531185	chr3	63904421	63904756	+	0	NA	intron (NM_019918, intron 3 of 5)	RLTR20D|LTR|ERVK	19024	NM_019918	56544	Mm.57069	NM_019918	ENSMUSG00000027824	Vmn2r1	Casrl1|EG56544|V2r83	vomeronasal 2, receptor 1	protein-coding
common_peak1-19358-29-80--1.22755992226951-4.22880836797159	chrX	12761478	12762734	+	0	NA	Intergenic	Intergenic	51303	NR_045430	72122	Mm.75434	NR_045429		2010308F09Rik	-	RIKEN cDNA 2010308F09 gene	ncRNA
common_peak1-10335-10-12--0.344024373132323-0.340565874754526	chr13	74494062	74494631	+	0	NA	exon (NM_024201, exon 3 of 3)	exon (NM_024201, exon 3 of 3)	6581	NM_001168658	67433	Mm.101586	NM_024201		Ccdc127	0610011N22Rik|5430420E17Rik|A430066A18|AI256405|AW050060|C130002N06	coiled-coil domain containing 127	protein-coding
unique_peak2-36653-2-5--1.50241675698448-1.08602067057793	chr3	18291938	18292370	+	0	NA	Intergenic	L1_Mus2|LINE|L1	88323	NR_040544	73959	Mm.60616	NR_040544		4930433B08Rik	-	RIKEN cDNA 4930433B08 gene	ncRNA
unique_peak1-7276-44-0-5.82189283456854-NA	chr9	99709473	99710658	+	0	NA	Intergenic	Intergenic	66524	NM_011440	20669	Mm.261595	NM_011440	ENSMUSG00000053747	Sox14	-	SRY (sex determining region Y)-box 14	protein-coding
common_peak1-9435-14-21--0.560215458279653-0.519193887192484	chr11	102184531	102185267	+	0	NA	Intergenic	RSINE1|SINE|B4	-4489	NM_011551	21429	Mm.2845	NM_011551	ENSMUSG00000020923	Ubtf	A930005G04Rik|NOR-90|Tcfubf|UBF|UBF1	upstream binding transcription factor, RNA polymerase I	protein-coding
common_peak1-18696-28-35--0.11696588162085-0.313805205020546	chr8	121590240	121591140	+	0	NA	intron (NM_019707, intron 6 of 13)	L1M3|LINE|L1	-277748	NM_024219	68196	Mm.358714	NM_024219	ENSMUSG00000031839	Hsbp1	0610007A03Rik|AA408769|Hsp25	heat shock factor binding protein 1	protein-coding
common_peak1-12717-29-16-1.02482723936477-1.87578206828671	chr18	50023331	50024236	+	0	NA	exon (NM_001081371, exon 11 of 43)	exon (NM_001081371, exon 11 of 43)	31132	NM_001081371	240283	Mm.257790	NM_001081371	ENSMUSG00000037416	Dmxl1	C630007L23Rik|D030030C22	Dmx-like 1	protein-coding
common_peak2-23344-64-102--0.221054125474615-0.525237659713319	chr15	39005758	39007101	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-23403	NM_001256382	116838	Mm.309296	NM_053271		Rims2	2810036I15Rik|AW048769|RIM2|Rab3ip2|Rim2(+40A)|Rim2(+44A)|Rim2(+4A)|Serg2|Syt3-rs|mKIAA0751	regulating synaptic membrane exocytosis 2	protein-coding
unique_peak2-38014-3-6--1.22133801201688-1.08602067057793	chr6	31165777	31166138	+	0	NA	intron (NR_110469, intron 1 of 3)	intron (NR_110469, intron 1 of 3)	2517	NR_110470	232685	Mm.443019	NM_144555		Lincpint	MNCb-1768|Pint|linc-Pint	long intergenic non-protein coding RNA, Trp53 induced transcript	ncRNA
common_peak1-19007-14-8-0.729291158915332-0.771068449301682	chr9	61322639	61323261	+	0	NA	Intergenic	(GA)n|Simple_repeat|Simple_repeat	102777	NM_001083927	21887	Mm.24255	NM_009389	ENSMUSG00000032280	Tle3	2610103N05Rik|ESG|Grg3a|Grg3b|mKIAA1547	transducin-like enhancer of split 3, homolog of Drosophila E(spl)	protein-coding
unique_peak1-5977-14-2-2.31425365963649-3.28500101358144	chr6	97341480	97342159	+	0	NA	intron (NM_145148, intron 6 of 23)	L1MEc|LINE|L1	-139045	NM_001081157	320502	Mm.68163	NM_001081157	ENSMUSG00000044086	Lmod3	5430424A14Rik	leiomodin 3 (fetal)	protein-coding
common_peak1-7643-25-43--0.597581713292191-0.895935469411238	chr1	71653388	71654302	+	0	NA	intron (NM_001276413, intron 28 of 43)	(TG)n|Simple_repeat|Simple_repeat	45963	NM_010233	14268	Mm.193099	NM_010233	ENSMUSG00000026193	Fn1	E330027I09|Fn|Fn-1	fibronectin 1	protein-coding
common_peak2-31394-10-11--0.228547155712387-0.31137425193576	chr8	87504118	87504607	+	0	NA	Intergenic	CpG	-1715	NM_008416	16477	Mm.1167	NM_008416	ENSMUSG00000052837	Junb	-	jun B proto-oncogene	protein-coding
unique_peak1-1935-13-4-1.45654393575041-2.23384849113406	chr14	76882259	76882934	+	0	NA	intron (NM_207652, intron 1 of 2)	MERVL_2A-int|LTR|ERVL	-5647	NM_001177751	21807	Mm.153272	NM_009366	ENSMUSG00000022010	Tsc22d1	AA589566|AW105905|Egr5|TSC-22|Tgfb1i4|Tsc|Tsc22	TSC22 domain family, member 1	protein-coding
common_peak2-23283-5-5--0.289342836727009-0.909929411522249	chr15	27993932	27994255	+	0	NA	Intergenic	Intergenic	-38490	NM_001081302	223435	Mm.485422	NM_001081302	ENSMUSG00000022263	Trio	6720464I07Rik|AA408740|Solo	triple functional domain (PTPRF interacting)	protein-coding
common_peak2-25401-11-8-0.338768582809301-1.14218153353838	chr19	9076437	9076992	+	0	NA	exon (NM_009643, exon 5 of 5)	exon (NM_009643, exon 5 of 5)	12940	NM_001286518	66395	Mm.203866	NM_009643	ENSMUSG00000069833	Ahnak	DY6	AHNAK nucleoprotein (desmoyokin)	protein-coding
unique_peak1-1236-7-2-1.21412832957703-1.45399745587252	chr11	113096585	113097041	+	0	NA	Intergenic	Intergenic	-25830	NR_040276	319871	Mm.383743	NR_040276	ENSMUSG00000085421	4732490B19Rik	-	RIKEN cDNA 4732490B19 gene	ncRNA
common_peak2-25851-56-43-0.776164206801946-2.20923096619064	chr19	42131090	42132041	+	0	NA	intron (NM_026152, intron 1 of 6)	intron (NM_026152, intron 1 of 6)	4847	NM_025752	66765	Mm.440412	NM_025752	ENSMUSG00000090369	4933411K16Rik	-	RIKEN cDNA 4933411K16 gene	protein-coding
common_peak1-11498-14-8-0.729291158915332-0.771068449301682	chr15	102673963	102674609	+	0	NA	Intergenic	Intergenic	-77276	NM_010464	15422	Mm.207062	NM_010464	ENSMUSG00000001655	Hoxc13	-	homeobox C13	protein-coding
common_peak2-23322-11-7-0.508693584251613-1.21681515183528	chr15	36918147	36918610	+	0	NA	Intergenic	Intergenic	18779	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
unique_peak2-37569-7-13--1.00826409175941-0.697979855752659	chr5	34534627	34535216	+	0	NA	Intergenic	Intergenic	-4562	NM_010753	17122	Mm.259260	NM_010753	ENSMUSG00000037235	Mxd4	2810410A03Rik|Mad4|bHLHc12	Max dimerization protein 4	protein-coding
common_peak1-9806-24-11-1.20824740204656-1.9654245668484	chr12	69422721	69423701	+	0	NA	Intergenic	Intergenic	-652953	NR_033146	100316870	Mm.379794	NR_033146		Gm17821	-	DDB1 and CUL4 associated factor 5 pseudogene	pseudo
unique_peak2-34323-0-7--3.84013093047421-1.80617997398389	chr13	96470809	96471203	+	0	NA	exon (NM_010170, exon 2 of 2)	exon (NM_010170, exon 2 of 2)	4131	NM_010170	14064	Mm.440952	NM_010170	ENSMUSG00000021675	F2rl2	F730031A08|PAR3	coagulation factor II (thrombin) receptor-like 2	protein-coding
common_peak1-16544-26-37--0.320028421285123-0.460129356264038	chr5	143622441	143623154	+	0	NA	Intergenic	B2_Mm2|SINE|B2	34120	NM_001033312	231863	Mm.89753	NM_001033312	ENSMUSG00000066640	Fbxl18	AI427077|B130019G13Rik|C330021B20Rik	F-box and leucine-rich repeat protein 18	protein-coding
unique_peak1-6481-10-1-2.35641534500877-2.57096726280955	chr7	112238696	112239219	+	0	NA	Intergenic	Intergenic	4725	NM_147044	259046	Mm.377805	NM_147044	ENSMUSG00000096029	Olfr679	MOR40-2	olfactory receptor 679	protein-coding
common_peak2-31266-8-18--1.24270509549601-1.15812782348128	chr8	71371164	71371736	+	0	NA	Intergenic	Intergenic	-33004	NM_008509	16956	Mm.1514	NM_008509	ENSMUSG00000015568	Lpl	-	lipoprotein lipase	protein-coding
common_peak2-21347-40-69--0.470307334193868-0.889546191492175	chr11	77606940	77607944	+	0	NA	intron (NM_011586, intron 1 of 39)	B3|SINE|B2	-7358	NM_001291214	360013	Mm.341248	NM_011586	ENSMUSG00000000631	Myo18a	MAJN|MyoPDZ|MysPDZ	myosin XVIIIA	protein-coding
common_peak2-23161-65-99--0.151690250297597-0.394128302109923	chr14	121378158	121379891	+	0	NA	Intergenic	Intergenic	-55772	NM_134082	223254	Mm.223980	NM_134082	ENSMUSG00000025555	Farp1	AW228844|BC030329|Cdep	FERM, RhoGEF (Arhgef) and pleckstrin domain protein 1 (chondrocyte-derived)	protein-coding
common_peak1-11849-18-22--0.210642804828661-0.321718508207525	chr16	90348691	90349596	+	0	NA	Intergenic	IAPEY3-int|LTR|ERVK	-37499	NM_015755	26559	Mm.125874	NM_015755	ENSMUSG00000053414	Hunk	Bstk1|Mak-v	hormonally upregulated Neu-associated kinase	protein-coding
common_peak1-11345-15-17--0.157760250886656-0.307611222530528	chr15	88837858	88838557	+	0	NA	intron (NM_031260, intron 13 of 26)	intron (NM_031260, intron 13 of 26)	24783	NM_031260	83456	Mm.358791	NM_031260	ENSMUSG00000015365	Mov10l1	CHAMP|Csm	Moloney leukemia virus 10-like 1	protein-coding
common_peak2-25595-58-41-0.903632512111736-2.95955828708081	chr19	8741223	8742264	+	0	NA	intron (NM_001112697, intron 2 of 2)	L2a|LINE|L2	3248	NM_001112697	12669	Mm.240607	NM_007698	ENSMUSG00000032773	Chrm1	Chrm-1|M1|M1R	cholinergic receptor, muscarinic 1, CNS	protein-coding
common_peak2-26897-11-9-0.186765489364251-0.344532117358383	chr2	158113109	158113619	+	0	NA	Intergenic	MERVL-int|LTR|ERVL	-18865	NM_008489	16803	Mm.218846	NM_008489	ENSMUSG00000016024	Lbp	Bpifd2|Ly88	lipopolysaccharide binding protein	protein-coding
common_peak2-19999-16-33--0.969199198982277-1.43262124146305	chr1	134361314	134361979	+	0	NA	3' UTR (NM_172516, exon 13 of 13)	3' UTR (NM_172516, exon 13 of 13)	-12298	NM_172517	213464	Mm.132868	NM_172517	ENSMUSG00000026439	Rbbp5	4933411J24Rik|C330016J05	retinoblastoma binding protein 5	protein-coding
common_peak2-24010-10-11--0.228547155712387-0.31137425193576	chr16	21256982	21257581	+	0	NA	intron (NR_046162, intron 3 of 4)	PB1D9|SINE|Alu	-1142	NR_106145	102465781		NR_106145	miRBase:MI0025025	Mir7680	mmu-mir-7680	microRNA mir-7680	ncRNA
common_peak2-25903-21-11-0.984526764545079-1.3750876294627	chr19	45790540	45791118	+	0	NA	Intergenic	Intergenic	14219	NR_045307	71232	Mm.50944	NR_045307		4933429K18Rik	-	RIKEN cDNA 4933429K18 gene	ncRNA
common_peak1-17175-28-19-0.7310310249341-1.12969433525548	chr6	121159749	121161235	+	0	NA	promoter-TSS (NM_017379)	promoter-TSS (NM_017379)	-296	NM_017379	53857	Mm.32884	NM_017379		Tuba8	-	tubulin, alpha 8	protein-coding
unique_peak2-39937-0-8--4.01005593191652-2.05605744720049	chrX	125104766	125105243	+	0	NA	Intergenic	B4A|SINE|B4	-481056	NR_045441	75274	Mm.108718	NR_045441	ENSMUSG00000086244	4930558G05Rik	-	RIKEN cDNA 4930558G05 gene	ncRNA
common_peak1-15381-43-24-1.13870699574898-3.01487716443559	chr4	62965082	62966224	+	0	NA	intron (NM_025685, intron 34 of 60)	(ATGGTG)n|Simple_repeat|Simple_repeat	-39947	NM_008768	18405	Mm.4777	NM_008768	ENSMUSG00000039196	Orm1	Agp-1|Agp-2|Orm-1	orosomucoid 1	protein-coding
common_peak2-24967-50-94--0.528915291851995-1.37055006108808	chr18	5591843	5593311	+	0	NA	promoter-TSS (NR_033552)	promoter-TSS (NR_033552)	-142	NR_033552	791318	Mm.84339	NR_033552	ENSMUSG00000063087	Gm10125	ENSMUSG00000063087|Zeb1os	predicted gene 10125	ncRNA
common_peak1-10851-23-30--0.232428805877794-0.363124929330844	chr14	120911161	120911988	+	0	NA	Intergenic	Intergenic	33891	NM_029519	76108	Mm.261448	NM_029519	ENSMUSG00000051615	Rap2a	5830461H18Rik	RAS related protein 2a	protein-coding
common_peak2-31560-8-7-0.00522241794757061-1.00793137938329	chr8	117112056	117112400	+	0	NA	intron (NM_019573, intron 5 of 8)	intron (NM_019573, intron 5 of 8)	148676	NM_019573	80707	Mm.440420	NM_019573	ENSMUSG00000004637	Wwox	5330426P09Rik|9030416C10Rik|WOX1	WW domain-containing oxidoreductase	protein-coding
unique_peak2-35952-2-5--1.50241675698448-1.08602067057793	chr19	10934906	10935326	+	0	NA	intron (NM_133804, intron 8 of 10)	intron (NM_133804, intron 8 of 10)	9153	NM_133804	98170	Mm.490254	NM_133804	ENSMUSG00000024736	Tmem132a	6720481D13Rik|Hspa5bp1|Orai1|R74613	transmembrane protein 132A	protein-coding
common_peak1-18069-9-16--0.897849434846119-0.732381977911291	chr8	10665933	10666463	+	0	NA	Intergenic	Intergenic	216256	NR_040705	320014	Mm.403203	NR_040705		B930025P03Rik	-	RIKEN cDNA B930025P03 gene	ncRNA
common_peak2-23756-13-9-0.456543935750406-0.53895475198017	chr15	97839915	97840409	+	0	NA	Intergenic	Intergenic	-5007	NM_001113515	12824	Mm.2423	NM_031163	ENSMUSG00000022483	Col2a1	Col2|Col2a|Col2a-1|Del1|Dmm|Lpk|M100856|Rgsc856	collagen, type II, alpha 1	protein-coding
common_peak1-18234-25-23-0.27688740462395-0.451698068655807	chr8	27041866	27042659	+	0	NA	intron (NM_008432, intron 24 of 26)	intron (NM_008432, intron 24 of 26)	44954	NM_029884	52120	Mm.28326	NM_029884	ENSMUSG00000037260	Hgsnat	9430010M12Rik|AW208455|D8Ertd354e|Tmem76	heparan-alpha-glucosaminide N-acetyltransferase	protein-coding
common_peak2-23789-14-6-1.09186123830004-1.16633110333236	chr15	99586230	99586716	+	0	NA	intron (NM_028015, intron 1 of 9)	B4A|SINE|B4	16473	NM_028015	71949	Mm.390821	NM_028015		Cers5	2310081H14Rik|AU045339|AW544927|Lass5|Trh4	ceramide synthase 5	protein-coding
common_peak1-14318-8-12--0.695217300193522-0.475924844171029	chr2	163552051	163552568	+	0	NA	TTS (NM_007398)	TTS (NM_007398)	23666	NM_007398	11486	Mm.388	NM_007398	ENSMUSG00000017697	Ada	-	adenosine deaminase	protein-coding
common_peak2-26867-15-16--0.075298090694683-0.301029995663976	chr2	155930260	155931073	+	0	NA	intron (NM_029397, intron 1 of 2)	ID_B1|SINE|B4	7035	NM_170598	75710	Mm.27660	NM_029397		Rbm12	5730420G12Rik|9430070C08Rik|AI852903|SWAN|mKIAA0765	RNA binding motif protein 12	protein-coding
common_peak1-11237-46-75--0.349931570194784-0.663690440871714	chr15	79687102	79688309	+	0	NA	Intergenic	MERVL_2A-int|LTR|ERVL	-22942	NM_001013362	504193	Mm.38438	NM_029079	ENSMUSG00000022421	Npcd	Cbx6-Nptxr	neuronal pentraxin chromo domain	protein-coding
common_peak2-24956-25-28-0.00386891021753399-0.304839791830758	chr18	84950821	84951592	+	0	NA	Intergenic	Intergenic	61572	NM_173770	240479	Mm.472378	NM_173770	ENSMUSG00000047992	Fam69c	B230399E16Rik	family with sequence similarity 69, member C	protein-coding
common_peak2-28954-5-9--1.02630843089322-1.21398586181642	chr5	100572391	100572827	+	0	NA	intron (NM_182841, intron 1 of 7)	intron (NM_182841, intron 1 of 7)	16218	NM_182841	231503	Mm.99790	NM_182841	ENSMUSG00000050640	Tmem150c	-	transmembrane protein 150C	protein-coding
common_peak2-29038-9-5-0.604650905683064-1.21398586181642	chr5	114719577	114719896	+	0	NA	intron (NM_148935, intron 2 of 9)	intron (NM_148935, intron 2 of 9)	4034	NM_148935	116810	Mm.17709	NM_148935	ENSMUSG00000042002	Foxn4	-	forkhead box N4	protein-coding
common_peak1-10897-38-24-0.927596469523806-2.07189913552604	chr15	99942069	99943409	+	0	NA	intron (NM_001159361, intron 1 of 37)	intron (NM_001159361, intron 1 of 37)	-42088	NM_172819	239667	Mm.243658	NM_172819	ENSMUSG00000023026	Dip2b	4932422C22|AI317237|AI854602|mKIAA1463	DIP2 disco-interacting protein 2 homolog B (Drosophila)	protein-coding
unique_peak1-5132-9-0-3.18961340640422-3.01029995663981	chr5	5518396	5518923	+	0	NA	Intergenic	Intergenic	-3683	NM_022890	64945	Mm.40132	NM_022890	ENSMUSG00000046798	Cldn12	-	claudin 12	protein-coding
common_peak1-17483-37-42-0.0997283167837208-0.340524918943711	chr7	24506776	24508108	+	0	NA	Intergenic	L1Md_F2|LINE|L1	20081	NM_001166718	545934	Mm.480277	NM_001166718	ENSMUSG00000074289	Vmn1r173	EG545934|Gm5892|Gm59	vomeronasal 1 receptor 173	protein-coding
common_peak1-17989-96-145--0.023773344524689-0.301781371699478	chr7	138845694	138847538	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	142711	NM_009774	12237	Mm.927	NM_009774	ENSMUSG00000066979	Bub3	AU019800|AU021329|AU043350|AW146323|C78067	budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae)	protein-coding
common_peak1-15001-7-5-0.214128329577033-1.01466476204226	chr3	108721064	108721585	+	0	NA	Intergenic	RMER21B|LTR|ERV1	-6702	NM_025845	66921	Mm.51049	NM_025845	ENSMUSG00000027881	Prpf38b	1110021E09Rik|AU018955	PRP38 pre-mRNA processing factor 38 (yeast) domain containing B	protein-coding
common_peak2-27040-9-8-0.0196884049619079-1.03275496310833	chr2	180217350	180217765	+	0	NA	Intergenic	URR1A|DNA|MER1_type	-17124	NM_018766	18216	Mm.301712	NM_018766	ENSMUSG00000027568	Ntsr1	NT-1R|NTR-1|NTR1	neurotensin receptor 1	protein-coding
common_peak2-26500-44-60--0.108844502994351-0.317735460399505	chr2	84650277	84651432	+	0	NA	TTS (NM_024230)	TTS (NM_024230)	11869	NM_019949	56791	Mm.38261	NM_019949	ENSMUSG00000027078	Ube2l6	2810489I21Rik|RIG-B|UBCH8|Ubce8|Ubcm8	ubiquitin-conjugating enzyme E2L 6	protein-coding
common_peak1-14501-25-18-0.613922391901521-0.86528749982161	chr3	14886091	14886930	+	0	NA	promoter-TSS (NM_009801)	promoter-TSS (NM_009801)	84	NM_009801	12349	Mm.1186	NM_009801	ENSMUSG00000027562	Car2	AI131712|CAII|Ca2|Car-2|Ltw-5|Lvtw-5	carbonic anhydrase 2	protein-coding
common_peak1-14027-32-26-0.524204517056192-0.869438253311882	chr2	114200881	114201724	+	0	NA	Intergenic	Intergenic	-174134	NM_175466	228491	Mm.132523	NM_175466	ENSMUSG00000040321	Zfp770	6430601A21Rik|Znf770	zinc finger protein 770	protein-coding
unique_peak2-35989-8-9--0.316705676939792-1.03275496310833	chr19	29058970	29059316	+	0	NA	Intergenic	MurERV4_19-int|LTR|ERVK	-5841	NM_025950	67072	Mm.78875	NM_025950	ENSMUSG00000024780	Cdc37l1	2700033A15Rik|BB159850|Cdc37l|Harc	cell division cycle 37-like 1	protein-coding
unique_peak2-34969-4-10--1.48289213249054-1.5150158574804	chr15	98108538	98109073	+	0	NA	Intergenic	ORR1A4|LTR|MaLR	17709	NM_173769	239652	Mm.207453	NM_173769	ENSMUSG00000022987	Zfp641	9930016F01Rik|Znf641	zinc finger protein 641	protein-coding
unique_peak2-33460-9-7-0.18961340640422-1.05908390183068	chr11	67966388	67966770	+	0	NA	intron (NM_018768, intron 7 of 7)	intron (NM_018768, intron 7 of 7)	-67815	NR_105833	102465219		NR_105833	miRBase:MI0021943	Mir6406	mmu-mir-6406	microRNA mir-6406	ncRNA
unique_peak1-1883-10-3-1.35641534500877-1.75805390616669	chr14	62806695	62807298	+	0	NA	Intergenic	Intergenic	104820	NM_173419	239133	Mm.127330	NM_173419	ENSMUSG00000048281	Dleu7	BC038059	deleted in lymphocytic leukemia, 7	protein-coding
common_peak1-11961-79-28-1.97085417204905-12.4299224074953	chr17	6466988	6469268	+	0	NA	Intergenic	MTC|LTR|MaLR	-17986	NR_033520	547127	Mm.297552	NM_001045538		Tmem181b-ps	Tmem181b	transmembrane protein 181B, pseudogene	pseudo
common_peak1-18212-33-33-0.24387472127519-0.447010559430123	chr8	24573991	24575292	+	0	NA	Intergenic	L1_Mur3|LINE|L1	52667	NM_013834	20377	Mm.281691	NM_013834	ENSMUSG00000031548	Sfrp1	2210415K03Rik|AW011917|AW107218|AW742929|sFRP-1	secreted frizzled-related protein 1	protein-coding
common_peak1-12126-11-15--0.491306415748387-0.435191258261915	chr17	26939676	26940255	+	0	NA	Intergenic	ID_B1|SINE|B4	21941	NM_172149	224630	Mm.21795	NM_172149	ENSMUSG00000024191	Bnip1	2010005M06Rik|5930429G21Rik|Sec20	BCL2/adenovirus E1B interacting protein 1	protein-coding
common_peak2-31393-27-30-0.0373496405083609-0.315041925765932	chr8	87182164	87183200	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	4069	NM_010499	15936	Mm.399	NM_010499	ENSMUSG00000053560	Ier2	AI317238|Ch1|Pip92	immediate early response 2	protein-coding
common_peak2-32220-24-44--0.698643193561958-1.07959258339368	chr9	122117266	122118193	+	0	NA	intron (NM_001271873, intron 11 of 12)	intron (NM_001271873, intron 11 of 12)	65417	NR_106185	102465896		NR_106185		Mir8106	mmu-mir-8106	microRNA mir-8106	ncRNA
unique_peak1-6069-11-1-2.50869358425161-2.83420869758413	chr6	119335742	119336120	+	0	NA	intron (NM_197985, intron 1 of 7)	B3A|SINE|B2	31570	NM_197985	68465	Mm.291826	NM_197985	ENSMUSG00000030168	Adipor2	1110001I14Rik|ADCR2|AI115388|AW554121|D6Ucla1e|Paqr2	adiponectin receptor 2	protein-coding
common_peak1-13424-156-115-1.15080226304764-12.5159598928672	chr19	53599759	53601078	+	0	NA	Intergenic	Intergenic	-3390	NM_001085390	240672	Mm.482424	NM_001085390		Dusp5	Gm337	dual specificity phosphatase 5	protein-coding
common_peak2-20632-6-26--2.18948939178317-3.22740510021752	chr10	80622049	80622591	+	0	NA	intron (NM_021501, intron 2 of 10)	B1_Mus2|SINE|Alu	8145	NM_021501	59004	Mm.34428	NM_021501		Pias4	PIASY|Pias-gamma|Piasg	protein inhibitor of activated STAT 4	protein-coding
unique_peak1-4739-11-2-1.92373108353046-2.32232533660526	chr3	107878959	107879369	+	0	NA	intron (NM_001289720, intron 14 of 17)	intron (NM_001289720, intron 14 of 17)	9180	NM_001289720	109674	Mm.274335	NM_028779	ENSMUSG00000027889	Ampd2	1200014F01Rik|AI552571|Ampd-2	adenosine monophosphate deaminase 2	protein-coding
common_peak1-16072-23-38--0.563634714353168-0.792515101870073	chr5	53266902	53267738	+	0	NA	Intergenic	L1M2|LINE|L1	41946	NM_024213	52206	Mm.272568	NM_024213		Anapc4	2610306D21Rik|APC4|D5Ertd249e	anaphase promoting complex subunit 4	protein-coding
unique_peak2-38194-10-11--0.228547155712387-0.31137425193576	chr6	104984068	104984723	+	0	NA	Intergenic	Intergenic	458267	NR_040297	100503536	Mm.366960	NR_040297		Gm19757	-	predicted gene, 19757	ncRNA
common_peak2-30098-7-7--0.200909169701811-0.97990265578305	chr6	135041160	135041474	+	0	NA	Intergenic	ID_B1|SINE|B4	25637	NM_181444	232431	Mm.23575	NM_181444	ENSMUSG00000046733	Gprc5a	Rai3|Raig1	G protein-coupled receptor, family C, group 5, member A	protein-coding
common_peak1-12013-66-173--0.924459831422887-5.76427821043763	chr17	15040845	15042431	+	0	NA	intron (NM_175173, intron 17 of 24)	intron (NM_175173, intron 17 of 24)	38491	NM_175173	71682	Mm.122698	NM_175173	ENSMUSG00000046991	Wdr27	0610012K18Rik	WD repeat domain 27	protein-coding
unique_peak1-7000-15-4-1.69023665566829-1.97518968347063	chr8	122525653	122526398	+	0	NA	intron (NM_030209, intron 1 of 14)	PB1D10|SINE|Alu	9655	NM_030209	78892	Mm.264680	NM_030209	ENSMUSG00000031825	Crispld2	1810049K24Rik|Lcrisp2|Lgl1|coffeecrisp	cysteine-rich secretory protein LCCL domain containing 2	protein-coding
common_peak2-23021-34-46--0.172520324676372-0.340524918943711	chr14	64440087	64441009	+	0	NA	Intergenic	(TA)n|Simple_repeat|Simple_repeat	-38601	NM_028228	72400	Mm.379214	NM_028228	ENSMUSG00000021958	Pinx1	2210403I16Rik|2610028A01Rik|67-11-3|AU024023|LPTS|LPTS1	PIN2/TERF1 interacting, telomerase inhibitor 1	protein-coding
unique_peak2-37770-2-12--2.61789397440441-2.55640854263862	chr5	115491972	115492472	+	0	NA	intron (NM_029012, intron 1 of 10)	intron (NM_029012, intron 1 of 10)	30689	NM_029012	74585	Mm.355894	NM_029012	ENSMUSG00000029550	Sppl3	4833416I09Rik|Psl4|Usmg3	signal peptide peptidase 3	protein-coding
unique_peak1-2869-11-6-0.701338662194009-1.32595962126035	chr17	35043879	35044407	+	0	NA	intron (NM_147151, intron 14 of 26)	intron (NM_147151, intron 14 of 26)	-7268	NM_023557	70129	Mm.183126	NM_023557	ENSMUSG00000007034	Slc44a4	2210409B01Rik|NG22	solute carrier family 44, member 4	protein-coding
unique_peak1-5007-7-6--0.00826409175941478-0.97990265578305	chr4	120951154	120951657	+	0	NA	Intergenic	L1_Rod|LINE|L1	46117	NM_001033791	545677	Mm.372731	NM_001033791	ENSMUSG00000073764	Gm12888	OTTMUSG00000008911	predicted gene 12888	protein-coding
common_peak2-24482-5-11--1.28934283672701-1.477227296591	chr17	24707783	24708311	+	0	NA	intron (NM_013630, intron 11 of 45)	intron (NM_013630, intron 11 of 45)	21152	NM_013630	18763	Mm.30435	NM_013630	ENSMUSG00000032855	Pkd1	PC1|mFLJ00285	polycystic kidney disease 1 homolog	protein-coding
common_peak2-23625-43-49-0.138706995748978-0.376238101225474	chr15	83171603	83172915	+	0	NA	intron (NM_025445, intron 2 of 15)	intron (NM_025445, intron 2 of 15)	8418	NM_025445	66251	Mm.258910	NM_025445	ENSMUSG00000054277	Arfgap3	0610009H19Rik|1810004P07Rik|1810035F16Rik|9130416J18Rik|Arfgap1	ADP-ribosylation factor GTPase activating protein 3	protein-coding
unique_peak2-38420-1-10--3.08648862885404-2.57096726280955	chr7	25221339	25221868	+	0	NA	intron (NM_199013, intron 1 of 2)	B4|SINE|B4	9098	NM_199013	210145	Mm.33811	NM_199013	ENSMUSG00000062028	Irgc1	F630044M05Rik|Gm1102|Gm474|Ifgge|Iigp5|Irgc	immunity-related GTPase family, cinema 1	protein-coding
unique_peak1-1502-10-1-2.35641534500877-2.57096726280955	chr13	3670534	3671005	+	0	NA	Intergenic	Intergenic	37491	NM_001267724	142688	Mm.253061	NM_178283	ENSMUSG00000033781	Asb13	2210015B19Rik|6430573K02Rik|Asb-13|C85285	ankyrin repeat and SOCS box-containing 13	protein-coding
common_peak1-18848-40-38-0.373573463888849-0.714844670794617	chr9	20459065	20460300	+	0	NA	intron (NM_023371, intron 1 of 3)	intron (NM_023371, intron 1 of 3)	3108	NM_023371	23988	Mm.7906	NM_023371	ENSMUSG00000032171	Pin1	0610025L01Rik|D9Bwg1161e	protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1	protein-coding
common_peak1-16081-13-15--0.221527969362231-0.308519316180257	chr5	63967902	63968649	+	0	NA	Intergenic	Intergenic	-72067	NM_177006	319807	Mm.319487	NM_028470	ENSMUSG00000090061	Nwd2	3110047P20Rik|B830017A01Rik|Hn1-ps2|mKIAA1239	NACHT and WD repeat domain containing 2	protein-coding
unique_peak2-35617-1-9--2.94898510510411-2.31132995230379	chr17	84244892	84245453	+	0	NA	intron (NM_025325, intron 1 of 9)	intron (NM_025325, intron 1 of 9)	958	NM_025325	107766	Mm.30100	NM_025325	ENSMUSG00000000673	Haao	0610007K21Rik|0610012J07Rik|3-HAO|3-HAOxase|3HAO	3-hydroxyanthranilate 3,4-dioxygenase	protein-coding
common_peak2-30450-9-13--0.617741515653384-0.459837087125828	chr7	45458878	45459688	+	0	NA	Intergenic	Intergenic	1060621	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak1-2403-9-3-1.18961340640422-1.57096726280955	chr15	98693490	98694051	+	0	NA	exon (NM_001033276, exon 11 of 55)	exon (NM_001033276, exon 11 of 55)	7866	NM_001033276	381022	Mm.264889	NM_001033276	ENSMUSG00000048154	Kmt2d	ALR|BC032281|BC058659|C430014K11Rik|KMT2B|Mll2|Mll4	lysine (K)-specific methyltransferase 2D	protein-coding
unique_peak2-34595-3-8--1.58390809140159-1.39487600375387	chr14	70187371	70187963	+	0	NA	exon (NM_153514, exon 9 of 10)	exon (NM_153514, exon 9 of 10)	17685	NM_153514	246710	Mm.102367	NM_153514	ENSMUSG00000022075	Rhobtb2	Dbc2|E130206H14Rik|mKIAA0717	Rho-related BTB domain containing 2	protein-coding
common_peak1-12626-33-36-0.121884196896579-0.346766333527252	chr18	33794647	33795405	+	0	NA	Intergenic	L1Md_A|LINE|L1	-159520	NR_038152	69749	Mm.248787	NR_038151	ENSMUSG00000087590	2410004N09Rik	-	RIKEN cDNA 2410004N09 gene	ncRNA
common_peak2-30972-13-9-0.456543935750406-0.53895475198017	chr8	3221192	3221777	+	0	NA	intron (NM_010568, intron 2 of 20)	intron (NM_010568, intron 2 of 20)	58133	NM_010568	16337	Mm.268003	NM_010568	ENSMUSG00000005534	Insr	4932439J01Rik|CD220|D630014A15Rik|IR|IR-A|IR-B	insulin receptor	protein-coding
unique_peak2-38058-36-65--0.565073033190699-1.09506545297322	chr6	47659063	47660503	+	0	NA	Intergenic	Intergenic	-24408	NR_002841	19799		NR_002841		Rn4.5s	-	4.5S RNA	rRNA
common_peak2-25026-25-49--0.782006284429619-1.42714050806394	chr18	24529260	24530461	+	0	NA	Intergenic	Intergenic	57811	NR_029573	387182		NR_029573	miRBase:MI0000229	Mir187	Mirn187|mmu-mir-187	microRNA 187	ncRNA
common_peak1-16628-174-190-0.621310115586481-5.19169218334694	chr6	30046849	30049309	+	0	NA	intron (NM_001164230, intron 4 of 11)	MTD|LTR|MaLR	21758	NM_001164229	18181	Mm.259258	NM_010938	ENSMUSG00000058440	Nrf1	C87038|D6Ertd415e	nuclear respiratory factor 1	protein-coding
common_peak1-17740-13-21--0.680959587999529-0.607095980551316	chr7	80860811	80861490	+	0	NA	Intergenic	Intergenic	-24043	NM_001162532	100038347	Mm.425464	NM_001162532	ENSMUSG00000078670	Fam174b	-	family with sequence similarity 174, member B	protein-coding
common_peak1-17437-30-35--0.000249591950439054-0.304088508634279	chr7	16207641	16209321	+	0	NA	Intergenic	Intergenic	16645	NM_145707	246791	Mm.425362	NM_145707	ENSMUSG00000066772	Obox3	Ohx	oocyte specific homeobox 3	protein-coding
common_peak1-14938-11-7-0.508693584251613-1.21681515183528	chr3	102752084	102752642	+	0	NA	intron (NM_201619, intron 7 of 10)	intron (NM_201619, intron 7 of 10)	-12340	NM_011516	20957	Mm.243849	NM_011516	ENSMUSG00000027855	Sycp1	SCP1	synaptonemal complex protein 1	protein-coding
common_peak1-10194-24-33--0.294252938482622-0.390124689062463	chr13	44733318	44734494	+	0	NA	Intergenic	Intergenic	-92237	NM_021878	16468	Mm.25059	NM_021878	ENSMUSG00000038518	Jarid2	Jmj|jumonji	jumonji, AT rich interactive domain 2	protein-coding
common_peak2-25349-67-132--0.510870952718195-1.77638557969138	chr18	80150597	80151904	+	0	NA	Intergenic	Intergenic	-92384	NM_053117	93737	Mm.24678	NM_053117	ENSMUSG00000056214	Pard6g	2410049N21Rik|Par6a	par-6 family cell polarity regulator gamma	protein-coding
common_peak1-15662-48-10-2.51149553259752-9.612105505917	chr4	136140570	136142067	+	0	NA	intron (NM_133872, intron 2 of 18)	RSINE1|SINE|B4	17320	NM_133872	99982	Mm.28540	NM_133872	ENSMUSG00000036940	Kdm1a	1810043O07Rik|AA408884|Aof2|D4Ertd478e|Kdm1|Lsd1|mKIAA0601	lysine (K)-specific demethylase 1A	protein-coding
common_peak2-24029-12-12--0.0516637330534535-0.309718203022949	chr16	23167558	23167954	+	0	NA	Intergenic	Intergenic	21147	NM_009605	11450	Mm.3969	NM_009605	ENSMUSG00000022878	Adipoq	30kDa|APN|Acdc|Acrp30|GBP28|adipo|apM1	adiponectin, C1Q and collagen domain containing	protein-coding
unique_peak1-7075-8-4-0.683294323060208-1.21878474469819	chr9	20652152	20652675	+	0	NA	Intergenic	Intergenic	-20673	NM_175687	319278	Mm.249932	NM_175687	ENSMUSG00000038884	A230050P20Rik	-	RIKEN cDNA A230050P20 gene	protein-coding
common_peak2-29617-7-8--0.370834171144123-1.00793137938329	chr6	54180917	54181472	+	0	NA	intron (NM_001163640, intron 6 of 12)	L3|LINE|CR1	-41622	NM_023543	69993	Mm.321147	NM_023543	ENSMUSG00000004633	Chn2	1700026N20Rik|4930557O16Rik|ARHGAP3|Bch	chimerin 2	protein-coding
common_peak1-12139-41-36-0.49169533921971-0.936258361511365	chr17	27633989	27635501	+	0	NA	intron (NM_001291045, intron 1 of 9)	L2|LINE|L2	5733	NM_001013385	268934	Mm.358940	NM_001013385	ENSMUSG00000063239	Grm4	Gprc1d|mGluR4	glutamate receptor, metabotropic 4	protein-coding
unique_peak1-916-8-0-3.00522241794757-2.70926996097583	chr11	49000208	49000720	+	0	NA	intron (NM_172793, intron 1 of 9)	intron (NM_172793, intron 1 of 9)	127	NM_172793	237754	Mm.130787	NM_172793		Btnl9	B430208I01|Btn3|D330012D11Rik	butyrophilin-like 9	protein-coding
common_peak2-30744-8-6-0.197867495889966-1.03789460276074	chr7	118705356	118705652	+	0	NA	intron (NM_173739, intron 3 of 10)	intron (NM_173739, intron 3 of 10)	217987	NM_173739	233733	Mm.323322	NM_173739	ENSMUSG00000038296	Galnt18	2900011G21Rik|BC024988|Galntl4	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 18	protein-coding
unique_peak2-36095-5-11--1.28934283672701-1.477227296591	chr19	57510608	57511124	+	0	NA	Intergenic	Intergenic	-16530	NM_029839	72133	Mm.258404	NM_028115	ENSMUSG00000025086	Trub1	2610009I02Rik|9030425C13Rik|AI448235|BB118943|C76870	TruB pseudouridine (psi) synthase homolog 1 (E. coli)	protein-coding
common_peak1-12368-19-22--0.120874629395327-0.306080386793804	chr17	64600899	64602018	+	0	NA	Intergenic	Intergenic	79765	NM_144859	224938	Mm.489681	NM_144859	ENSMUSG00000024083	Pja2	AI447901|AL022700|Neurodap1|mKIAA0438	praja 2, RING-H2 motif containing	protein-coding
unique_peak1-2079-10-3-1.35641534500877-1.75805390616669	chr15	36872387	36872936	+	0	NA	Intergenic	MIRc|SINE|MIR	64496	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
common_peak1-10629-9-6-0.382258484346616-1.11707584880836	chr14	41013985	41014454	+	0	NA	Intergenic	L1_Mur1|LINE|L1	545268	NR_045936	73591	Mm.65499	NR_045936		1700109I08Rik	-	RIKEN cDNA 1700109I08 gene	ncRNA
common_peak2-22698-14-18--0.348711353085941-0.360333814299795	chr13	99238659	99239526	+	0	NA	Intergenic	L1M4|LINE|L1	-34072	NR_045498	70090	Mm.410857	NR_045498		2310005E17Rik	-	RIKEN cDNA 2310005E17 gene	ncRNA
common_peak2-21857-12-7-0.648775985087639-0.697979855752659	chr11	121741026	121741504	+	0	NA	Intergenic	Tigger7|DNA|MER2_type	49733	NM_029049	74675	Mm.61213	NM_029049	ENSMUSG00000039198	Ptchd3	4930451E13Rik|4933440L20Rik|RNDEu-3	patched domain containing 3	protein-coding
unique_peak1-4011-9-0-3.18961340640422-3.01029995663981	chr2	35832405	35832933	+	0	NA	intron (NM_029774, intron 1 of 9)	intron (NM_029774, intron 1 of 9)	2475	NM_029774	74410	Mm.21591	NM_028921	ENSMUSG00000026885	Ttll11	4932702F08Rik|4933424A20Rik|AU043211|D2Ertd624e	tubulin tyrosine ligase-like family, member 11	protein-coding
unique_peak1-5677-14-6-1.09186123830004-1.16633110333236	chr6	31514718	31515366	+	0	NA	Intergenic	Intergenic	-1105	NM_013723	27205	Mm.89918	NM_013723	ENSMUSG00000025608	Podxl	AW121214|Ly102|PC|PCLP-1|Pclp1	podocalyxin-like	protein-coding
unique_peak2-39636-2-8--2.08737925770563-1.65811743852845	chr9	103060700	103061063	+	0	NA	intron (NM_173781, intron 2 of 7)	ORR1E-int|LTR|MaLR	43514	NM_009275	20818	Mm.273053	NM_009275	ENSMUSG00000032553	Srprb	AA409543	signal recognition particle receptor, B subunit	protein-coding
unique_peak1-2938-10-6-0.549060422951165-1.21398586181642	chr17	59075986	59076367	+	0	NA	intron (NM_027001, intron 6 of 12)	intron (NM_027001, intron 6 of 12)	54622	NM_027001	69239	Mm.246732	NM_027001	ENSMUSG00000024227	2610034M16Rik	AV114557	RIKEN cDNA 2610034M16 gene	protein-coding
common_peak2-25613-24-30--0.160986407619158-0.316008636696545	chr19	8966255	8966971	+	0	NA	promoter-TSS (NM_176843)	promoter-TSS (NM_176843)	-864	NM_176843	109077	Mm.290474	NM_176843	ENSMUSG00000071652	Ints5	1110055N21Rik|mKIAA1698	integrator complex subunit 5	protein-coding
unique_peak1-968-23-0-4.72176750450908-NA	chr11	61602668	61603420	+	0	NA	intron (NM_013881, intron 21 of 26)	intron (NM_013881, intron 21 of 26)	-27454	NM_001164243	212627	Mm.27703	NM_144806	ENSMUSG00000020528	Prpsap2	A230054F23Rik	phosphoribosyl pyrophosphate synthetase-associated protein 2	protein-coding
common_peak2-22970-56-57-0.377614830311671-0.835692031846851	chr14	54575299	54577534	+	0	NA	Intergenic	Intergenic	290801	NM_001205242	100568452	Mm.213248	NM_001205242		A430107P09Rik	Va10	RIKEN cDNA A430107P09 gene	protein-coding
common_peak2-27832-76-92-0.222785574755251-0.613619973925043	chr3	146812146	146813529	+	0	NA	Intergenic	L1Md_F3|LINE|L1	297506	NM_027594	70892	Mm.187793	NM_027594	ENSMUSG00000036745	Ttll7	1110049N09Rik|4921517B04Rik|C630030B20|Ttll7s	tubulin tyrosine ligase-like family, member 7	protein-coding
common_peak2-19584-36-63--0.520678913832246-0.955521670249469	chr1	16618342	16619357	+	0	NA	Intergenic	Intergenic	-9430	NM_001271017	66799	Mm.122430	NM_025773	ENSMUSG00000025939	Ube2w	6130401J04Rik	ubiquitin-conjugating enzyme E2W (putative)	protein-coding
common_peak1-15486-16-21--0.341167976369236-0.392630012299441	chr4	108847966	108848709	+	0	NA	intron (NM_133885, intron 1 of 22)	intron (NM_133885, intron 1 of 22)	26540	NM_133885	100273	Mm.366315	NM_133885	ENSMUSG00000028559	Osbpl9	2600011I06Rik|AU015843|Orp-9	oxysterol binding protein-like 9	protein-coding
unique_peak2-35891-2-8--2.08737925770563-1.65811743852845	chr19	38715050	38715496	+	0	NA	intron (NM_019588, intron 2 of 31)	intron (NM_019588, intron 2 of 31)	116586	NM_019588	74055	Mm.34031	NM_019588	ENSMUSG00000024998	Plce1	4933403A21Rik|PLCepsilon|Plce|mKIAA1516	phospholipase C, epsilon 1	protein-coding
common_peak2-28896-57-60-0.335295702516042-0.760282562501395	chr5	90875139	90876468	+	0	NA	Intergenic	Intergenic	-14112	NM_009654	11657	Mm.16773	NM_009654	ENSMUSG00000029368	Alb	Alb-1|Alb1	albumin	protein-coding
common_peak1-14683-13-7-0.778472030637769-0.817533494790411	chr3	65136752	65137274	+	0	NA	intron (NR_040390, intron 2 of 3)	intron (NR_040390, intron 2 of 3)	16338	NR_040390	319798	Mm.445698	NR_040390		A730090N16Rik	-	RIKEN cDNA A730090N16 gene	ncRNA
unique_peak2-35442-8-11--0.579740082773585-1.14218153353838	chr17	35234735	35235363	+	0	NA	intron (NM_178592, intron 7 of 19)	intron (NM_178592, intron 7 of 19)	8813	NM_178592	193742	Mm.43745	NM_178592	ENSMUSG00000007036	Abhd16a	AI326074|Bat-5|Bat5|D17H6S82E|NG26	abhydrolase domain containing 16A	protein-coding
unique_peak2-34612-11-15--0.491306415748387-0.435191258261915	chr14	74947179	74948118	+	0	NA	Intergenic	Intergenic	-92999	NM_172812	15558	Mm.214351	NM_172812	ENSMUSG00000034997	Htr2a	E030013E04|Htr-2|Htr2	5-hydroxytryptamine (serotonin) receptor 2A	protein-coding
unique_peak2-38281-3-8--1.58390809140159-1.39487600375387	chr6	134143353	134143787	+	0	NA	intron (NM_007961, intron 2 of 7)	B1F2|SINE|Alu	157845	NM_007961	14011	Mm.269995	NM_007961	ENSMUSG00000030199	Etv6	AW123102|AW557856|Tel	ets variant 6	protein-coding
common_peak1-14430-84-110-0.140518192538919-0.435871204742955	chr2	180701040	180702465	+	0	NA	promoter-TSS (NM_001177710)	promoter-TSS (NM_001177710)	-178	NM_145760	228998	Mm.33765	NM_145760	ENSMUSG00000027575	Arfgap1	AI115377|Arf1gap	ADP-ribosylation factor GTPase activating protein 1	protein-coding
unique_peak1-2607-9-3-1.18961340640422-1.57096726280955	chr16	33675493	33676092	+	0	NA	Intergenic	Intergenic	-8760	NM_175256	77446	Mm.245741	NM_172934	ENSMUSG00000075254	Heg1	4632417D23Rik|5530401I02Rik|9530025L16Rik|BC038614|Gm629|OTTMUSG00000027315	HEG homolog 1 (zebrafish)	protein-coding
common_peak2-31715-26-36--0.281554273470488-0.419637632935626	chr9	110116720	110118208	+	0	NA	intron (NM_009211, intron 25 of 27)	L2|LINE|L2	-28823	NM_013884	29873	Mm.38496	NM_013884	ENSMUSG00000032482	Cspg5	Caleb|Ngc	chondroitin sulfate proteoglycan 5	protein-coding
unique_peak2-35073-4-5--0.608423014574403-0.909929411522249	chr16	15685066	15685479	+	0	NA	intron (NM_011159, intron 22 of 85)	intron (NM_011159, intron 22 of 85)	47313	NM_011159	19090	Mm.71	NM_011159	ENSMUSG00000022672	Prkdc	AI326420|AU019811|DNA-PKcs|DNAPDcs|DNAPK|DNPK1|DOXNPH|HYRC1|XRCC7|dxnph|p460|scid|slip	protein kinase, DNA activated, catalytic polypeptide	protein-coding
common_peak2-29214-27-44--0.500307145434439-0.714193724415661	chr5	137307080	137307899	+	0	NA	intron (NM_024474, intron 3 of 12)	RMER19C|LTR|ERVK	51488	NM_024474	140709	Mm.295020	NM_024474	ENSMUSG00000004415	Col26a1	9430032K24Rik|BC002218|Col26a|Emid2|Emu2	collagen, type XXVI, alpha 1	protein-coding
common_peak2-23798-7-6--0.00826409175941478-0.97990265578305	chr15	99846615	99847006	+	0	NA	TTS (NM_001024526)	TTS (NM_001024526)	-22285	NM_001159361	239667	Mm.243658	NM_172819	ENSMUSG00000023026	Dip2b	4932422C22|AI317237|AI854602|mKIAA1463	DIP2 disco-interacting protein 2 homolog B (Drosophila)	protein-coding
unique_peak2-32618-5-6--0.511735258063458-0.947717972411649	chr1	106759199	106759593	+	0	NA	intron (NM_011800, intron 1 of 11)	L1Md_F2|LINE|L1	94000	NM_011800	23836	Mm.103640	NM_011800	ENSMUSG00000050840	Cdh20	Cdh7	cadherin 20	protein-coding
unique_peak2-33759-13-33--1.30899081061257-2.01759298435799	chr11	117790423	117791416	+	0	NA	Intergenic	Intergenic	39761	NM_007707	12702	Mm.3468	NM_007707	ENSMUSG00000053113	Socs3	Cis3|Cish3|EF-10|Ef10|SSI-3|Ssi3	suppressor of cytokine signaling 3	protein-coding
unique_peak1-1772-13-1-2.77847203063777-3.64038867156802	chr14	73399637	73400407	+	0	NA	Intergenic	Intergenic	-25388	NR_027860	668489	Mm.158324	NR_027860		Gm9199	EG668489	glycine cleavage system protein H (aminomethyl carrier) pseudogene	pseudo
common_peak2-20340-11-13--0.298661337805991-0.337263207250336	chr10	5212676	5213308	+	0	NA	intron (NM_001079686, intron 16 of 54)	L1Md_F2|LINE|L1	61158	NM_001079686	64009	Mm.331626	NM_022027	ENSMUSG00000019769	Syne1	8B|A330049M09Rik|BE692247|C130039F11Rik|CPG2|Myne1|mKIAA1756	spectrin repeat containing, nuclear envelope 1	protein-coding
unique_peak1-4490-16-8-0.948338640825749-1.02063122982878	chr3	116194591	116195426	+	0	NA	intron (NM_025517, intron 10 of 10)	B1_Mur1|SINE|Alu	16085	NM_025517	66368	Mm.251228	NM_025517	ENSMUSG00000000339	Rtca	2310009A18Rik|AI450277|RPC|Rtcd1	RNA 3'-terminal phosphate cyclase	protein-coding
unique_peak2-39438-5-7--0.704380336005853-1.01466476204226	chr9	45497365	45497722	+	0	NA	intron (NM_001081270, intron 11 of 32)	intron (NM_001081270, intron 11 of 32)	139178	NM_001081373	214552	Mm.260103	NM_172531	ENSMUSG00000043987	Cep164	AI450905|BC027092|D030051D21|mKIAA1052	centrosomal protein 164	protein-coding
unique_peak2-35345-4-6--0.830815435910851-0.989110657569874	chr17	24849457	24849859	+	0	NA	Intergenic	Intergenic	-5060	NM_145396	213773	Mm.100353	NM_145396		Tbl3	9430070M15Rik	transducin (beta)-like 3	protein-coding
unique_peak1-6964-10-4-1.03448725012141-1.5150158574804	chr8	117115324	117115779	+	0	NA	intron (NM_019573, intron 5 of 8)	intron (NM_019573, intron 5 of 8)	151999	NM_019573	80707	Mm.440420	NM_019573	ENSMUSG00000004637	Wwox	5330426P09Rik|9030416C10Rik|WOX1	WW domain-containing oxidoreductase	protein-coding
unique_peak1-5951-13-1-2.77847203063777-3.64038867156802	chr6	91357772	91358462	+	0	NA	intron (NM_009527, intron 2 of 3)	intron (NM_009527, intron 2 of 3)	3246	NM_009527	22421	Mm.56964	NM_009527	ENSMUSG00000030093	Wnt7a	AI849442|Wnt-7a|px|tw	wingless-type MMTV integration site family, member 7A	protein-coding
common_peak2-23644-30-46--0.384913442185765-0.566504029620424	chr15	84191498	84192642	+	0	NA	Intergenic	Intergenic	35521	NM_001162500	64099	Mm.251356	NM_022321	ENSMUSG00000022439	Parvg	AI413459	parvin, gamma	protein-coding
common_peak1-16066-55-84--0.204771064985-0.43855686106456	chr5	52189161	52190640	+	0	NA	Intergenic	Intergenic	-244740	NM_008904	19017	Mm.259072	NM_008904	ENSMUSG00000029167	Ppargc1a	A830037N07Rik|ENSMUSG00000079510|Gm11133|PGC-1|PGC-1v|Pgc-1alpha|Pgc1|Pgco1|Ppargc1	peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	protein-coding
common_peak2-22314-37-46--0.0285957801918189-0.301029995663982	chr13	21530556	21531364	+	0	NA	intron (NM_001012311, intron 1 of 3)	RMER6A|LTR|ERVK	1619	NM_001162919	319207	Mm.434384	NM_001012311	ENSMUSG00000055313	Pgbd1	4921509E05Rik	piggyBac transposable element derived 1	protein-coding
common_peak2-22337-9-16--0.897849434846119-0.732381977911291	chr13	23573746	23574197	+	0	NA	intron (NM_001289614, intron 4 of 6)	intron (NM_001289614, intron 4 of 6)	6755	NM_001289615	238555	Mm.129668	NM_175938		Btn2a2	Btn2|D030063K05	butyrophilin, subfamily 2, member A2	protein-coding
unique_peak1-643-12-1-2.64877598508764-3.36932189928148	chr10	43723274	43723842	+	0	NA	exon (NM_172393, exon 1 of 20)	exon (NM_172393, exon 1 of 20)	1094	NM_172393	11630	Mm.292082	NM_172393	ENSMUSG00000019866	Aim1	AI462491|AI463325	absent in melanoma 1	protein-coding
common_peak1-9774-13-8-0.608547029195456-0.660903317613904	chr12	56287989	56288623	+	0	NA	intron (NM_001100109, intron 15 of 15)	ID_B1|SINE|B4	-12273	NM_001100116	100101807	Mm.439875	NM_001100116		1700047I17Rik2	-	RIKEN cDNA 1700047I17 gene 2	protein-coding
common_peak1-17404-8-14--0.901668177660948-0.660903317613906	chr7	4684597	4685083	+	0	NA	Intergenic	Intergenic	-6889	NM_146177	232811	Mm.247844	NM_146177	ENSMUSG00000059851	Suv420h2	BC024816|KMT5C|Suv4-20h2	suppressor of variegation 4-20 homolog 2 (Drosophila)	protein-coding
common_peak1-9058-71-91-0.120882222662958-0.393152724387913	chr11	68852065	68854351	+	0	NA	Intergenic	Intergenic	-5937	NM_011496	20877	Mm.3488	NM_011496	ENSMUSG00000020897	Aurkb	AIM-1|AIRK2|AL022959|Aik2|Aim1|Ark2|AurB|IPL1|STK-1|Stk12|Stk5	aurora kinase B	protein-coding
common_peak1-16699-49-78--0.297496925151919-0.601241822381509	chr6	17636890	17637987	+	0	NA	Intergenic	Intergenic	-6556	NM_001289624	64213	Mm.12051	NM_022332	ENSMUSG00000029534	St7	9430001H04Rik|Fam4a2|HELG|RAY1|SEN4|TSG7	suppression of tumorigenicity 7	protein-coding
common_peak1-18912-12-16--0.4386868561627-0.368541233333383	chr9	42263564	42264357	+	0	NA	intron (NM_173038, intron 1 of 7)	intron (NM_173038, intron 1 of 7)	16349	NM_173038	272589	Mm.34483	NM_173038	ENSMUSG00000037287	Tbcel	D330014K23|E130107N23Rik|Lrrc35	tubulin folding cofactor E-like	protein-coding
unique_peak1-4771-13-7-0.778472030637769-0.817533494790411	chr3	123053850	123054512	+	0	NA	intron (NM_027135, intron 15 of 22)	B4|SINE|B4	34727	NM_201638	210529	Mm.260039	NM_201638	ENSMUSG00000028114	Mettl14	G430022H21Rik|mKIAA1627	methyltransferase like 14	protein-coding
unique_peak1-13-27-6-2.18419102883763-4.54209996799533	chr1	135019640	135020710	+	0	NA	Intergenic	RLTR28B|LTR|ERVL	-7568	NM_133819	108954	Mm.293628	NM_133819	ENSMUSG00000046062	Ppp1r15b	1810033K10Rik|AI606441|C530022L24Rik|CReP	protein phosphatase 1, regulatory (inhibitor) subunit 15b	protein-coding
unique_peak1-6329-7-1-1.79909083029819-1.80617997398389	chr7	46844375	46844901	+	0	NA	Intergenic	Intergenic	71502	NM_001004139	70227	Mm.333800	NM_001004139	ENSMUSG00000068959	Zfp619	3000002G13Rik	zinc finger protein 619	protein-coding
unique_peak2-32856-0-5--3.42509343119537-1.32905871926422	chr10	68861582	68861979	+	0	NA	Intergenic	CpG	-46120	NM_007659	12534	Mm.281367	NM_007659	ENSMUSG00000019942	Cdk1	Cdc2|Cdc2a|p34<CDC2>	cyclin-dependent kinase 1	protein-coding
unique_peak1-6765-10-4-1.03448725012141-1.5150158574804	chr8	60858852	60859400	+	0	NA	intron (NM_175032, intron 4 of 11)	intron (NM_175032, intron 4 of 11)	320467	NM_001177534	100271928	Mm.484123	NM_001177534		Gm15881	OTTMUSG00000027193	predicted gene 15881	protein-coding
common_peak2-30431-8-7-0.00522241794757061-1.00793137938329	chr7	44525072	44525481	+	0	NA	Intergenic	Intergenic	1994628	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak2-37275-3-9--1.73591118484664-1.57096726280955	chr4	115411684	115412124	+	0	NA	intron (NM_172698, intron 1 of 11)	intron (NM_172698, intron 1 of 11)	1226	NM_172698	230648	Mm.283565	NM_172698	ENSMUSG00000034210	Efcab14	4732418C07Rik	EF-hand calcium binding domain 14	protein-coding
common_peak1-9894-45-41-0.468040602566111-0.938077053400193	chr12	85957918	85959675	+	0	NA	promoter-TSS (NM_008992)	promoter-TSS (NM_008992)	-380	NM_008992	19300	Mm.229109	NM_008992	ENSMUSG00000021240	Abcd4	P69r|P70R|Pxmp1l	ATP-binding cassette, sub-family D (ALD), member 4	protein-coding
common_peak2-20887-9-5-0.604650905683064-1.21398586181642	chr11	3394170	3394574	+	0	NA	TTS (NM_172439)	TTS (NM_172439)	6142	NM_172791	237625	Mm.100476	NM_172791	ENSMUSG00000034579	Pla2g3	-	phospholipase A2, group III	protein-coding
unique_peak2-36347-5-5--0.289342836727009-0.909929411522249	chr2	92606285	92606644	+	0	NA	Intergenic	Intergenic	-148794	NM_030725	80976	Mm.33490	NM_030725	ENSMUSG00000027220	Syt13	5730409J20Rik|AI549909|mKIAA1427	synaptotagmin XIII	protein-coding
unique_peak1-5332-17-1-3.21829633820504-4.59734841376773	chr5	86997557	86998407	+	0	NA	intron (NM_178730, intron 2 of 10)	intron (NM_178730, intron 2 of 10)	-50357	NM_177162	320454	Mm.184522	NM_177162	ENSMUSG00000079451	Tmprss11g	9930032O22Rik|Desc4	transmembrane protease, serine 11g	protein-coding
common_peak1-9050-17-13-0.410941416147434-0.546772548767014	chr11	67861026	67861841	+	0	NA	intron (NM_018768, intron 6 of 7)	intron (NM_018768, intron 6 of 7)	81448	NM_018768	55943	Mm.3973	NM_018768	ENSMUSG00000020903	Stx8	0610007H08Rik|1110002H11Rik|4930571E13Rik|CARB	syntaxin 8	protein-coding
common_peak2-32076-9-8-0.0196884049619079-1.03275496310833	chr9	95844973	95845596	+	0	NA	intron (NM_019864, intron 42 of 46)	ORR1A2|LTR|MaLR	-9895	NM_011916	24127	Mm.291179	NM_011916	ENSMUSG00000032410	Xrn1	Dhm2|exo|mXrn1	5'-3' exoribonuclease 1	protein-coding
unique_peak1-682-10-0-3.35641534500877-3.31132995230379	chr10	77089258	77089799	+	0	NA	intron (NM_019803, intron 1 of 5)	L1M5|LINE|L1	4462	NM_019803	22213	Mm.458125	NM_019803	ENSMUSG00000009293	Ube2g2	1110003O05Rik|D10Xrf369|UBC7|Ubc7p	ubiquitin-conjugating enzyme E2G 2	protein-coding
common_peak2-27155-18-26--0.441968350935117-0.471456499375593	chr3	30512469	30513225	+	0	NA	intron (NM_030557, intron 7 of 7)	RSINE1|SINE|B4	11838	NM_001289621	80732	Mm.200378	NM_030557	ENSMUSG00000037730	Mynn	2810011C24Rik|AA415053|AI661031|AW049392|Mynr|SBBIZ1	myoneurin	protein-coding
unique_peak1-3948-20-3-2.48807478459119-3.8429424127101	chr2	29651970	29652909	+	0	NA	3' UTR (NM_178693, exon 7 of 7)	3' UTR (NM_178693, exon 7 of 7)	-5761	NM_011989	26569	Mm.330113	NM_011989	ENSMUSG00000059316	Slc27a4	BB144259|FATP4	solute carrier family 27 (fatty acid transporter), member 4	protein-coding
common_peak2-27258-6-8--0.60452689106201-1.03789460276074	chr3	56182487	56182844	+	0	NA	Intergenic	(GA)n|Simple_repeat|Simple_repeat	-195042	NM_030595	26422	Mm.384353	NM_030595	ENSMUSG00000027799	Nbea	Lyst2|mKIAA1544	neurobeachin	protein-coding
common_peak2-25849-15-7-1.01216475055566-1.08658567012551	chr19	42126720	42127148	+	0	NA	exon (NM_025752, exon 1 of 1)	exon (NM_025752, exon 1 of 1)	216	NM_025752	66765	Mm.440412	NM_025752	ENSMUSG00000090369	4933411K16Rik	-	RIKEN cDNA 4933411K16 gene	protein-coding
common_peak1-15963-12-5-1.06381348436648-1.78669045979184	chr5	31202515	31203147	+	0	NA	intron (NM_001048192, intron 12 of 16)	intron (NM_001048192, intron 12 of 16)	7330	NM_001134692	67695	Mm.21450	NM_024460	ENSMUSG00000038803	Ost4	2310016E02Rik	oligosaccharyltransferase 4 homolog (S. cerevisiae)	protein-coding
unique_peak1-5200-23-2-3.13680500378792-5.60081203524255	chr5	34293947	34294981	+	0	NA	Intergenic	MMERVK10C-int|LTR|ERVK	-15557	NM_011914	24116	Mm.332320	NM_011914		Nelfa	Whsc2|Whsc2h	negative elongation factor complex member A, Whsc2	protein-coding
unique_peak2-38502-0-10--4.29956254911151-2.57096726280955	chr7	39588615	39588950	+	0	NA	Intergenic	Intergenic	-275570	NM_001013810	434171	Mm.60990	NM_001013810	ENSMUSG00000060565	Gm5591	EG434171	predicted gene 5591	protein-coding
common_peak1-12665-16-27--0.689091279789542-0.798885335210229	chr18	36560537	36561216	+	0	NA	Intergenic	Intergenic	52598	NM_001081365	66060	Mm.272527	NM_001081365		Cystm1	0610010O12Rik	cysteine-rich transmembrane module containing 1	protein-coding
unique_peak1-2348-14-1-2.89921616035764-3.91338994363176	chr15	85636184	85636850	+	0	NA	TTS (NM_197998)	TTS (NM_197998)	5610	NM_001164626	72355	Mm.33706	NM_197998	ENSMUSG00000064284	Cdpf1	2210021J22Rik	cysteine rich, DPF motif domain containing 1	protein-coding
common_peak2-25767-10-10--0.103016273628528-0.301029995663987	chr19	32197147	32197791	+	0	NA	3' UTR (NM_001168526, exon 6 of 6)	3' UTR (NM_001168526, exon 6 of 6)	-19839	NM_018830	54447	Mm.491229	NM_018830	ENSMUSG00000024887	Asah2	AI585898	N-acylsphingosine amidohydrolase 2	protein-coding
unique_peak2-36327-6-19--1.75652998450706-1.84350559086818	chr2	85060880	85061456	+	0	NA	Intergenic	Intergenic	-24312	NM_001033346	241528	Mm.291095	NM_001033346	ENSMUSG00000075224	Lrrc55	A330097E02Rik|Gm351	leucine rich repeat containing 55	protein-coding
common_peak1-14356-23-39--0.600160590378282-0.869438253311888	chr2	166805521	166806457	+	0	NA	intron (NM_011490, intron 1 of 11)	URR1B|DNA|MER1_type	-15772	NR_111895	20853	Mm.73276	NM_011490	ENSMUSG00000039536	Stau1	5830401L18Rik|AW549911|C85792|Stau	staufen (RNA binding protein) homolog 1 (Drosophila)	protein-coding
common_peak1-12699-61-73-0.17329596412039-0.440322431956433	chr18	42511436	42512658	+	0	NA	Intergenic	Intergenic	-42204	NM_138945	18998	Mm.488204	NM_138945		Pou4f3	Brn3.1|Brn3c|ddl|dreidel	POU domain, class 4, transcription factor 3	protein-coding
common_peak2-22917-10-21--1.10301627362853-1.16735254179725	chr14	45329628	45330368	+	0	NA	Intergenic	BGLII|LTR|ERVK	14664	NM_001162954	666744	Mm.387002	NM_001162954	ENSMUSG00000091923	Gm8267	EG666744	predicted gene 8267	protein-coding
common_peak2-31551-7-10--0.660340788339108-1.12966497611638	chr8	111747008	111747446	+	0	NA	Intergenic	L1M2|LINE|L1	117581	NR_002928	384864	Mm.390083	NR_002928		Gm1943	-	WD repeat domain 70 pseudogene	pseudo
unique_peak2-32735-0-8--4.01005593191652-2.05605744720049	chr1	163382754	163383019	+	0	NA	Intergenic	Intergenic	-41902	NM_183391	240873	Mm.276823	NM_183391	ENSMUSG00000066755	Tnfsf18	Gitrl	tumor necrosis factor (ligand) superfamily, member 18	protein-coding
unique_peak2-36593-2-5--1.50241675698448-1.08602067057793	chr2	176226713	176227106	+	0	NA	intron (NR_040256, intron 3 of 4)	intron (NR_040256, intron 3 of 4)	-39860	NM_001100415	627914	Mm.466613	NM_001100415		Gm14430	OTTMUSG00000016607	predicted gene 14430	protein-coding
unique_peak1-6144-10-1-2.35641534500877-2.57096726280955	chr6	135268514	135269025	+	0	NA	Intergenic	B4A|SINE|B4	-8367	NM_029595	76400	Mm.293018	NM_029595		Pbp2	1700023A18Rik|AI326308|Pebp-2|Pebp2	phosphatidylethanolamine binding protein 2	protein-coding
common_peak2-31346-15-34--1.11711826638931-1.74023246399357	chr8	84236318	84237161	+	0	NA	intron (NM_001297596, intron 2 of 24)	intron (NM_001297596, intron 2 of 24)	370278	NM_001297593	234515	Mm.324468	NM_001024617	ENSMUSG00000037940	Inpp4b	E130107I17Rik	inositol polyphosphate-4-phosphatase, type II	protein-coding
common_peak1-16714-13-24--0.865384159136956-0.879255460030357	chr6	29316764	29317379	+	0	NA	intron (NM_007594, intron 5 of 6)	(T)n|Simple_repeat|Simple_repeat	13442	NM_007538	12057	Mm.56987	NM_007538	ENSMUSG00000058831	Opn1sw	AW551857|Bcp	opsin 1 (cone pigments), short-wave-sensitive (color blindness, tritan)	protein-coding
common_peak1-9274-31-42--0.201026083888975-0.369793428364259	chr11	87590750	87591910	+	0	NA	exon (NM_172449, exon 22 of 32)	exon (NM_172449, exon 22 of 32)	-15956	NM_010824	17523	Mm.4668	NM_010824	ENSMUSG00000009350	Mpo	mKIAA4033	myeloperoxidase	protein-coding
common_peak1-15006-66-159--0.803444430461521-4.2320776983256	chr3	109122520	109123804	+	0	NA	Intergenic	L1_Mm|LINE|L1	-20439	NM_020505	57257	Mm.282257	NM_020505	ENSMUSG00000033721	Vav3	A530094I06Rik|AA986410|Idd18.1	vav 3 oncogene	protein-coding
common_peak2-25197-20-43--0.971356834046104-1.80105410004791	chr18	60560489	60561232	+	0	NA	Intergenic	L1Md_F2|LINE|L1	25177	NM_001146275	60440	Mm.261140	NM_021792	ENSMUSG00000054072	Iigp1	2900074L10Rik|AI046432|AW111922|Ifgga1|Iigp|Irga6	interferon inducible GTPase 1	protein-coding
unique_peak1-1201-16-3-2.11826364226806-2.65002542325363	chr11	103395480	103396351	+	0	NA	TTS (NM_001033434)	TTS (NM_001033434)	80138	NM_001033434	380730	Mm.380214	NM_001033434	ENSMUSG00000034239	Gm884	LRRC37	predicted gene 884	protein-coding
common_peak2-25821-19-12-0.702247608520594-0.840839978588874	chr19	38091774	38092457	+	0	NA	intron (NM_001099634, intron 3 of 52)	RMER12|LTR|ERVK	25952	NM_001099634	226101	Mm.34674	NM_177035	ENSMUSG00000048612	Myof	2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3	myoferlin	protein-coding
unique_peak1-3432-31-5-2.64027617009197-6.28613342899827	chr19	6543225	6544545	+	0	NA	promoter-TSS (NM_009203)	promoter-TSS (NM_009203)	-815	NM_009203	20521	Mm.391146	NM_009203	ENSMUSG00000061742	Slc22a12	AI987855|OAT4L|Rst|Slc22al2|URAT1	solute carrier family 22 (organic anion/cation transporter), member 12	protein-coding
common_peak1-7757-29-44--0.379563015714564-0.524158758825513	chr1	91250187	91251233	+	0	NA	Intergenic	B1F|SINE|Alu	51998	NR_040482	77331	Mm.374962	NR_040482		C030007H22Rik	-	RIKEN cDNA C030007H22 gene	ncRNA
common_peak2-26161-23-18-0.473839991065495-0.618644178587689	chr2	18392511	18392982	+	0	NA	Intergenic	MTEa|LTR|MaLR	-78289	NM_007869	13418	Mm.246674	NM_007869	ENSMUSG00000026740	Dnajc1	4733401K02Rik|AA960110|D230036H06Rik|Dnajl1|ERdj1|ERj1p|MTJ1	DnaJ (Hsp40) homolog, subfamily C, member 1	protein-coding
common_peak2-32248-25-77--1.42355231351714-5.1971155953312	chrX	166509647	166511094	+	0	NA	Intergenic	Intergenic	-93521	NR_029457	654820	Mm.34441	NM_001039559	ENSMUSG00000072844	G530011O06Rik	-	RIKEN cDNA G530011O06 gene	ncRNA
unique_peak2-38925-5-5--0.289342836727009-0.909929411522249	chr8	22398212	22398570	+	0	NA	Intergenic	ORR1A3-int|LTR|MaLR	8950	NM_001177487	100041787	Mm.437206	NM_001177487		Gm15292	ENSMUSG00000074441|OTTMUSG00000019784	predicted gene 15292	protein-coding
unique_peak2-32437-3-13--2.22133801201688-2.36932189928148	chr1	97910380	97911065	+	0	NA	intron (NR_040467, intron 1 of 2)	intron (NR_040467, intron 1 of 2)	7613	NR_040467	73454	Mm.396229	NR_040467		1700063A18Rik	-	RIKEN cDNA 1700063A18 gene	ncRNA
common_peak1-16186-26-27-0.120544170100858-0.335332249061431	chr5	92137708	92138812	+	0	NA	Intergenic	Intergenic	58066	NR_045383	73452	Mm.396233	NR_045383		1700063O14Rik	-	RIKEN cDNA 1700063O14 gene	ncRNA
common_peak2-31486-22-46--0.907304746590233-1.67017740290565	chr8	106602891	106604170	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-21995	NM_009868	12562	Mm.21767	NM_009868	ENSMUSG00000031871	Cdh5	7B4|AA408225|Cd144|VE-Cad|VECD|VEcad|Vec	cadherin 5	protein-coding
common_peak1-13443-20-9-1.16614668970383-1.52222891542741	chr19	55850061	55850964	+	0	NA	intron (NM_001142920, intron 4 of 11)	intron (NM_001142920, intron 4 of 11)	34212	NM_001142923	21416	Mm.139815	NM_009333	ENSMUSG00000024985	Tcf7l2	TCF4B|TCF4E|Tcf-4|Tcf4|mTcf-4B|mTcf-4E	transcription factor 7 like 2, T cell specific, HMG box	protein-coding
common_peak2-20803-34-32-0.337674407642813-0.595371917655143	chr10	126935155	126935941	+	0	NA	exon (NM_001168292, exon 26 of 26)	exon (NM_001168292, exon 26 of 26)	-3225	NM_177707	237611	Mm.32087	NM_177707	ENSMUSG00000040287	Stac3	9830125E18	SH3 and cysteine rich domain 3	protein-coding
common_peak2-30321-5-5--0.289342836727009-0.909929411522249	chr7	24599446	24599744	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-5376	NM_001166727	622222	Mm.480269	NM_001166727	ENSMUSG00000095632	Vmn1r175	EG622222|Gm6299	vomeronasal 1 receptor 175	protein-coding
common_peak1-12766-84-116-0.0645693393056206-0.333879276883411	chr18	60747488	60749335	+	0	NA	intron (NM_133363, intron 2 of 6)	intron (NM_133363, intron 2 of 6)	2959	NM_133363	170947	Mm.159257	NM_133363		Myoz3	4833419K08Rik|Fatz-3	myozenin 3	protein-coding
common_peak1-9051-12-19--0.673152109799724-0.546772548767014	chr11	67921739	67922166	+	0	NA	intron (NM_018768, intron 6 of 7)	RLTR24|LTR|ERV1	-112442	NR_105833	102465219		NR_105833	miRBase:MI0021943	Mir6406	mmu-mir-6406	microRNA mir-6406	ncRNA
common_peak2-19994-9-6-0.382258484346616-1.11707584880836	chr1	134096092	134096457	+	0	NA	intron (NM_001033250, intron 1 of 3)	intron (NM_001033250, intron 1 of 3)	1609	NR_029777	723818		NR_029777	miRBase:MI0000646	Mir135b	Mirn135b	microRNA 135b	ncRNA
common_peak1-17952-29-16-1.02482723936477-1.87578206828671	chr7	128297631	128298448	+	0	NA	intron (NM_139310, intron 24 of 28)	MLT1K|LTR|MaLR	71087	NM_139310	246190	Mm.221073	NM_139310	ENSMUSG00000034990	Otoa	-	otoancorin	protein-coding
common_peak1-12907-11-20--0.883623838527147-0.876666802405043	chr18	84088398	84088885	+	0	NA	Intergenic	Intergenic	167313	NM_001081300	110796	Mm.102136	NM_001081300	ENSMUSG00000046982	Tshz1	5730407I04Rik|D18Bwg1409e|Mtsh1|NY-CO-33|Sdccag33|Tsh1|mKIAA4206|teashirt1	teashirt zinc finger family member 1	protein-coding
common_peak2-21725-20-12-0.787635066450101-0.949240599462708	chr11	113291727	113292277	+	0	NA	intron (NM_027216, intron 5 of 9)	intron (NM_027216, intron 5 of 9)	135127	NM_001166503	69806	Mm.341021	NM_027216	ENSMUSG00000041654	Slc39a11	1810074D23Rik	solute carrier family 39 (metal ion transporter), member 11	protein-coding
unique_peak2-33665-3-4--0.73591118484664-0.864171920961574	chr11	100859995	100860393	+	0	NA	Intergenic	B1_Mur4|SINE|Alu	-10572	NM_016920	11975	Mm.340818	NM_016920	ENSMUSG00000019302	Atp6v0a1	AA959968|ATP6a1|Atp6n1|Atp6n1a|Atpv0a1|Vpp-1|Vpp1	ATPase, H+ transporting, lysosomal V0 subunit A1	protein-coding
common_peak1-14257-63-59-0.531421995462071-1.47433608278374	chr2	155472858	155474160	+	0	NA	intron (NM_019828, intron 9 of 18)	B2_Mm2|SINE|B2	24893	NR_030757	735275		NR_030757		Mir499	Mirn499|mmu-mir-499	microRNA 499	ncRNA
common_peak1-19501-9-11--0.395349094316936-0.344532117358383	chrX	162901911	162902390	+	0	NA	intron (NM_019773, intron 1 of 2)	ORR1D1|LTR|MaLR	15649	NM_019773	56382	Mm.25306	NM_019773	ENSMUSG00000079316	Rab9	2410064E05Rik|AI195561|Rab9a|Sid6061p	RAB9, member RAS oncogene family	protein-coding
common_peak2-28442-11-25--1.19174613388948-1.51503956548638	chr4	149518043	149518909	+	0	NA	TTS (NM_019741)	TTS (NM_019741)	-4605	NM_001085529	435818	Mm.359648	NM_001085529	ENSMUSG00000062064	Slc2a7	OTTMUSG00000010396	solute carrier family 2 (facilitated glucose transporter), member 7	protein-coding
common_peak1-12066-56-73-0.0261424598102931-0.306899018650293	chr17	23802303	23803979	+	0	NA	intron (NM_153784, intron 5 of 9)	intron (NM_153784, intron 5 of 9)	5651	NM_153784	212733	Mm.59997	NM_153784	ENSMUSG00000043782	Ccdc64b	BICDR-2	coiled-coil domain containing 64B	protein-coding
common_peak2-30447-9-11--0.395349094316936-0.344532117358383	chr7	45333447	45333998	+	0	NA	Intergenic	Intergenic	1186182	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak1-15544-14-37--1.34871135308594-2.38724857749547	chr4	120405125	120405859	+	0	NA	intron (NM_001081142, intron 1 of 13)	intron (NM_001081142, intron 1 of 13)	14289	NM_001081142	60613	Mm.249977	NM_001081142	ENSMUSG00000028631	Kcnq4	-	potassium voltage-gated channel, subfamily Q, member 4	protein-coding
unique_peak1-1315-11-1-2.50869358425161-2.83420869758413	chr11	121111654	121112164	+	0	NA	intron (NM_026272, intron 9 of 10)	intron (NM_026272, intron 9 of 10)	-9392	NM_001080932	68837	Mm.209750	NM_001080932	ENSMUSG00000039275	Foxk2	1110054H05Rik|5730434B08Rik|6230415M23Rik|ILF|Ilf1	forkhead box K2	protein-coding
common_peak2-30634-20-33--0.599388056659146-0.781990829058356	chr7	97788514	97789404	+	0	NA	Intergenic	Intergenic	-164454	NM_026734	68472	Mm.289791	NM_026734		Tmem126b	1110001A23Rik	transmembrane protein 126B	protein-coding
unique_peak1-4475-19-2-2.81772482594053-4.27364484827118	chr3	27213508	27214283	+	0	NA	Intergenic	Lx8|LINE|L1	-2104	NM_009425	22035	Mm.1062	NM_009425	ENSMUSG00000039304	Tnfsf10	A330042I21Rik|AI448571|APO-2L|Ly81|TL2|Trail	tumor necrosis factor (ligand) superfamily, member 10	protein-coding
unique_peak1-494-14-1-2.89921616035764-3.91338994363176	chr1	179866093	179866600	+	0	NA	Intergenic	MT2A|LTR|ERVL	-55220	NM_001034899	545391	Mm.442974	NM_001034899	ENSMUSG00000091476	Gm16432	EG545391|EG666250	predicted gene 16432	protein-coding
unique_peak2-34543-5-13--1.51173525806346-1.78669045979184	chr14	57316687	57317454	+	0	NA	TTS (NM_023773)	TTS (NM_023773)	2767	NR_046209	100503823	Mm.474486	NR_046209		Gm16973	-	predicted gene, 16973	ncRNA
unique_peak1-4535-14-3-1.89921616035764-2.80787975886178	chr3	37481273	37481675	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	-57398	NM_011896	24063	Mm.330986	NM_011896	ENSMUSG00000037211	Spry1	sprouty1	sprouty homolog 1 (Drosophila)	protein-coding
unique_peak1-5530-10-4-1.03448725012141-1.5150158574804	chr5	139732739	139733265	+	0	NA	intron (NM_001163316, intron 1 of 8)	B4A|SINE|B4	3551	NM_001163316	67604	Mm.270137	NM_026269	ENSMUSG00000025858	Get4	1110007L15Rik|AW412535|Cee	golgi to ER traffic protein 4 homolog (S. cerevisiae)	protein-coding
common_peak2-22100-6-7--0.434601889619698-0.97990265578305	chr12	80219592	80219905	+	0	NA	Intergenic	RMER1B|Other|Other	-12027	NM_009705	11847	Mm.3506	NM_009705	ENSMUSG00000021125	Arg2	AII|AU022422	arginase type II	protein-coding
unique_peak2-35031-5-5--0.289342836727009-0.909929411522249	chr15	103305345	103305763	+	0	NA	intron (NM_153505, intron 16 of 30)	intron (NM_153505, intron 16 of 30)	21298	NM_153505	105855	Mm.30805	NM_153505	ENSMUSG00000022488	Nckap1l	4930568P13Rik|AI463083|Hem1|Hemp1	NCK associated protein 1 like	protein-coding
common_peak2-27226-18-12-0.612479433087259-0.739965416525508	chr3	51652523	51653221	+	0	NA	intron (NM_001004176, intron 2 of 4)	intron (NM_001004176, intron 2 of 4)	187757	NM_174995	211666	Mm.24679	NM_174995	ENSMUSG00000074604	Mgst2	GST2|MGST-II	microsomal glutathione S-transferase 2	protein-coding
common_peak2-28437-6-6--0.241956811677302-0.947717972411649	chr4	149171295	149171607	+	0	NA	Intergenic	Intergenic	-23075	NM_027460	70556	Mm.41877	NM_027460	ENSMUSG00000028982	Slc25a33	5730438N18Rik|Pnc1	solute carrier family 25, member 33	protein-coding
unique_peak2-38783-8-6-0.197867495889966-1.03789460276074	chr7	128288898	128289282	+	0	NA	exon (NM_139310, exon 23 of 29)	exon (NM_139310, exon 23 of 29)	62138	NM_139310	246190	Mm.221073	NM_139310	ENSMUSG00000034990	Otoa	-	otoancorin	protein-coding
common_peak1-17851-10-9-0.0344872501214071-1.05503135781948	chr7	112422571	112423122	+	0	NA	Intergenic	Intergenic	-13763	NM_001011533	259161	Mm.377867	NM_001011533	ENSMUSG00000073909	Olfr688	MOR40-16|MOR40-5|Olfr688-ps1	olfactory receptor 688	protein-coding
common_peak2-28892-10-6-0.549060422951165-1.21398586181642	chr5	90223567	90223996	+	0	NA	intron (NM_177872, intron 3 of 21)	B4A|SINE|B4	88578	NM_177872	330119	Mm.133062	NM_177872	ENSMUSG00000043635	Adamts3	1100001H14Rik|6330442E02Rik	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 3	protein-coding
unique_peak2-38907-26-79--1.3940290027289-5.25998910104471	chr8	13623176	13625068	+	0	NA	intron (NM_009025, intron 2 of 23)	intron (NM_009025, intron 2 of 23)	53465	NM_009025	19414	Mm.18517	NM_009025	ENSMUSG00000031453	Rasa3	AI326412|C86362|E130011G04|GAPIII|scat	RAS p21 protein activator 3	protein-coding
unique_peak1-4403-22-2-3.06232160436625-5.33257845442771	chr2	165967396	165968285	+	0	NA	intron (NM_028072, intron 1 of 20)	(TCCC)n|Simple_repeat|Simple_repeat	12945	NM_001252578	72043	Mm.1011	NM_028072	ENSMUSG00000006800	Sulf2	2010004N24Rik|AU020235|MSulf-2|mKIAA1247	sulfatase 2	protein-coding
common_peak1-13702-18-7-1.31291915122835-1.71830443967823	chr2	30452681	30453464	+	0	NA	intron (NM_030137, intron 1 of 1)	intron (NM_030137, intron 1 of 1)	2508	NM_030137	78617	Mm.40413	NM_030137	ENSMUSG00000047363	Cstad	9530039B02Rik	CSA-conditional, T cell activation-dependent protein	protein-coding
unique_peak2-34632-8-7-0.00522241794757061-1.00793137938329	chr14	79089219	79089595	+	0	NA	intron (NM_001081336, intron 1 of 28)	intron (NM_001081336, intron 1 of 28)	35489	NM_001081336	380921	Mm.89591	NM_001081336	ENSMUSG00000034731	Dgkh	5930402B05Rik|D130015C16	diacylglycerol kinase, eta	protein-coding
unique_peak1-262-9-0-3.18961340640422-3.01029995663981	chr1	92710200	92710704	+	0	NA	intron (NM_001243008, intron 5 of 45)	intron (NM_001243008, intron 5 of 45)	30096	NM_001243009	12835	Mm.7562	NM_009935	ENSMUSG00000048126	Col6a3	AI507288|Col6a-3	collagen, type VI, alpha 3	protein-coding
unique_peak1-5175-13-2-2.19350952991661-3.03832868024006	chr5	30151461	30152035	+	0	NA	intron (NR_105781, intron 1 of 2)	intron (NR_105781, intron 1 of 2)	36197	NR_105781	102465962		NR_105781	miRBase:MI0021891	Mir6362	mmu-mir-6362	microRNA mir-6362	ncRNA
common_peak2-31291-17-28--0.639684656922534-0.677583764578261	chr8	72570629	72571356	+	0	NA	intron (NM_027481, intron 1 of 13)	MERVL_2A-int|LTR|ERVL	4280	NM_027481	70616	Mm.17665	NM_027481	ENSMUSG00000011306	Sugp1	5730496N02Rik|Sf4	SURP and G patch domain containing 1	protein-coding
unique_peak2-38892-1-4--1.94898510510411-1.10720996964787	chr8	8661655	8661972	+	0	NA	Intergenic	CpG-13825	-1040	NM_010111	13642	Mm.209813	NM_010111	ENSMUSG00000001300	Efnb2	ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1	ephrin B2	protein-coding
unique_peak1-541-16-7-1.11826364226806-1.23399803405144	chr1	191277007	191277622	+	0	NA	Intergenic	RLTR10-int|LTR|ERVK	-51162	NM_001281848	16526	Mm.33304	NM_010607	ENSMUSG00000037624	Kcnk2	A430027H14Rik|AI848635|TREK-1	potassium channel, subfamily K, member 2	protein-coding
common_peak1-9119-28-29-0.146068524212944-0.357106932979091	chr11	74770463	74771432	+	0	NA	intron (NM_001002764, intron 8 of 18)	intron (NM_001002764, intron 8 of 18)	31573	NM_001002764	103677	Mm.288460	NM_001002764	ENSMUSG00000038290	Smg6	AI317223|AU041178	Smg-6 homolog, nonsense mediated mRNA decay factor (C. elegans)	protein-coding
unique_peak2-34563-7-5-0.214128329577033-1.01466476204226	chr14	65878440	65878870	+	0	NA	intron (NM_021458, intron 1 of 6)	intron (NM_021458, intron 1 of 6)	2645	NM_021458	14365	Mm.214687	NM_021458		Fzd3	AU020229|D930050A07Rik|Fz3	frizzled homolog 3 (Drosophila)	protein-coding
common_peak1-13149-39-22-1.09219929086214-2.58772382823801	chr19	10280310	10281762	+	0	NA	intron (NM_001163431, intron 2 of 3)	intron (NM_001163431, intron 2 of 3)	513	NM_001163431	69038	Mm.375100	NM_026919	ENSMUSG00000036372	Tmem258	1810006K21Rik	transmembrane protein 258	protein-coding
common_peak2-20706-15-39--1.30976334433171-2.45517123152778	chr10	93640806	93641636	+	0	NA	intron (NM_011629, intron 9 of 13)	L1Md_A|LINE|L1	-20533	NM_025551	66414	Mm.27886	NM_025551	ENSMUSG00000020022	Ndufa12	2410011G03Rik|AW112974	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12	protein-coding
common_peak2-22696-14-9-0.577288065470282-0.630231561310125	chr13	98890475	98890982	+	0	NA	intron (NM_012026, intron 2 of 35)	intron (NM_012026, intron 2 of 35)	85392	NM_012026	110596	Mm.252718	NM_012026	ENSMUSG00000021662	Arhgef28	9230110L08Rik|AI323540|D13Bwg1089e|RIP2|Rgnef|RhoGEF|Rhoip2|p190RhoGEF	Rho guanine nucleotide exchange factor (GEF) 28	protein-coding
common_peak1-18508-24-28--0.0647710923598552-0.301029995663979	chr8	87182228	87183146	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	4064	NM_010499	15936	Mm.399	NM_010499	ENSMUSG00000053560	Ier2	AI317238|Ch1|Pip92	immediate early response 2	protein-coding
common_peak1-15377-18-14-0.406028555619833-0.532159081577619	chr4	59626157	59627040	+	0	NA	intron (NM_001301367, intron 11 of 11)	intron (NM_001301367, intron 11 of 11)	-12485	NM_001015681	230259	Mm.45688	NM_153158	ENSMUSG00000045071	E130308A19Rik	-	RIKEN cDNA E130308A19 gene	protein-coding
common_peak1-13466-8-8--0.164702583494742-1.00793137938329	chr19	61140988	61141511	+	0	NA	intron (NM_018869, intron 4 of 15)	intron (NM_018869, intron 4 of 15)	110963	NM_001177513	633057	Mm.426097	NM_001177513	ENSMUSG00000094649	Gm7102	EG633057	predicted gene 7102	protein-coding
unique_peak1-2271-29-5-2.52732757989395-5.79706174304447	chr15	78081991	78083450	+	0	NA	intron (NM_008677, intron 3 of 9)	intron (NM_008677, intron 3 of 9)	7479	NM_008677	17972	Mm.2068	NM_008677	ENSMUSG00000071715	Ncf4	AI451400|p40phox	neutrophil cytosolic factor 4	protein-coding
common_peak2-22076-22-49--0.99657208468732-2.02221055290443	chr12	76532647	76534327	+	0	NA	Intergenic	RLTR9E|LTR|ERVK	-15719	NM_175644	217674	Mm.252250	NM_175644	ENSMUSG00000048982	Gphb5	Zlut1	glycoprotein hormone beta 5	protein-coding
common_peak1-13629-13-18--0.469455482805817-0.409888142029227	chr2	25272476	25273176	+	0	NA	Intergenic	Intergenic	-5936	NM_001289453	14347	Mm.1203	NM_013524	ENSMUSG00000036587	Fut7	AI853193|FTVII|Fuc-TVII|FucT-VII	fucosyltransferase 7	protein-coding
common_peak1-13485-49-56-0.173393808860443-0.416927796942778	chr2	25607539	25608968	+	0	NA	Intergenic	Intergenic	-12836	NM_010694	16820	Mm.4632	NM_010694	ENSMUSG00000026936	Lcn3	Vnsp1	lipocalin 3	protein-coding
unique_peak1-585-15-2-2.4272022498345-3.53487848679804	chr10	9504701	9505466	+	0	NA	intron (NM_001081344, intron 19 of 25)	intron (NM_001081344, intron 19 of 25)	100563	NR_038036	620417	Mm.378085	NR_038036		Gm6150	-	predicted gene 6150	ncRNA
common_peak2-27497-20-41--0.904242638187568-1.56490221051684	chr3	94954095	94954783	+	0	NA	Intergenic	Intergenic	-8157	NM_027206	69769	Mm.34368	NM_027206	ENSMUSG00000013707	Tnfaip8l2	1810019A08Rik|AW610835|TIPE2	tumor necrosis factor, alpha-induced protein 8-like 2	protein-coding
common_peak1-12332-81-144--0.307859487006369-0.908631134688596	chr17	51178259	51179881	+	0	NA	intron (NM_001285991, intron 2 of 22)	intron (NM_001285991, intron 2 of 22)	119633	NM_001285993	72238	Mm.120650	NM_028162	ENSMUSG00000023923	Tbc1d5	1600014N05Rik	TBC1 domain family, member 5	protein-coding
unique_peak1-7099-12-1-2.64877598508764-3.36932189928148	chr9	41497251	41497898	+	0	NA	Intergenic	B3|SINE|B2	107565	NR_029822	387236		NR_029822	miRBase:MI0000725	Mir125b-1	Mirn125b|Mirn125b-1	microRNA 125b-1	ncRNA
common_peak2-32035-65-71-0.322240938034815-0.789061865030689	chr9	78175299	78177064	+	0	NA	intron (NM_205822, intron 1 of 2)	intron (NM_205822, intron 1 of 2)	344	NM_205822	382088	Mm.360477	NM_205822	ENSMUSG00000038750	Omt2b	AU018149|C86230|Mosg|OM2b	oocyte maturation, beta	protein-coding
common_peak2-23017-7-7--0.200909169701811-0.97990265578305	chr14	63131633	63132009	+	0	NA	Intergenic	PB1D7|SINE|Alu	-42753	NM_001243857	629059	Mm.291864	NM_001243857	ENSMUSG00000035184	Fam124a	EG629059	family with sequence similarity 124, member A	protein-coding
unique_peak2-35779-1-6--2.43441193227435-1.56314192529759	chr18	53235630	53235977	+	0	NA	Intergenic	Intergenic	-100216	NM_026386	67804	Mm.252171	NM_026386	ENSMUSG00000034484	Snx2	0610030A03Rik	sorting nexin 2	protein-coding
unique_peak2-37685-8-13--0.802132504110034-0.562038191119711	chr5	98985944	98986546	+	0	NA	intron (NM_001024614, intron 3 of 5)	intron (NM_001024614, intron 3 of 5)	-81562	NR_030484	735265		NR_030484		Mir703	Mirn703|mmu-mir-703	microRNA 703	ncRNA
common_peak1-16045-22-15-0.647284105087405-0.849699271740893	chr5	38219889	38220923	+	0	NA	Intergenic	Intergenic	-4582	NM_010835	17701	Mm.256509	NM_010835	ENSMUSG00000048450	Msx1	AA675338|AI324650|Hox-7|Hox7|Hox7.1|msh	msh homeobox 1	protein-coding
unique_peak1-2854-9-4-0.867685311516858-1.36011389749466	chr17	31914368	31914929	+	0	NA	Intergenic	CT-rich|Low_complexity|Low_complexity	78089	NM_010831	17691	Mm.290941	NM_010831	ENSMUSG00000024042	Sik1	Msk|Sik|Snf1lk	salt inducible kinase 1	protein-coding
unique_peak1-7288-10-1-2.35641534500877-2.57096726280955	chr9	107325260	107325726	+	0	NA	intron (NM_001174048, intron 1 of 37)	intron (NM_001174048, intron 1 of 37)	23282	NM_020263	56808	Mm.273084	NM_020263	ENSMUSG00000010066	Cacna2d2	Cacna2d|a2d2|du|mKIAA0558|td|torpid	calcium channel, voltage-dependent, alpha 2/delta subunit 2	protein-coding
unique_peak1-5254-12-4-1.32684789020028-2.04196296489515	chr5	53950129	53950631	+	0	NA	intron (NM_001080928, intron 1 of 10)	Lx8|LINE|L1	3362	NM_001080928	19664	Mm.209292	NM_009035	ENSMUSG00000039191	Rbpj	AI843960|CBF1|Igkjrb|Igkrsbp|RBP-J|RBP-J kappa|RBPjk|Rbpsuh	recombination signal binding protein for immunoglobulin kappa J region	protein-coding
unique_peak1-6507-30-9-1.84774731460451-4.06788929322894	chr7	116287059	116288440	+	0	NA	intron (NM_057173, intron 1 of 3)	intron (NM_057173, intron 1 of 3)	26073	NM_057173	109594	Mm.360145	NM_057173	ENSMUSG00000036111	Lmo1	Rbtn-1|Rbtn1|Ttg1	LIM domain only 1	protein-coding
common_peak1-14406-29-15-1.11229008061511-2.08778000015696	chr2	174074938	174075918	+	0	NA	Intergenic	ORR1A2-int|LTR|MaLR	17198	NR_029646	723906		NR_029646	miRBase:MI0000394	Mir296	Mirn296|mmu-mir-296	microRNA 296	ncRNA
unique_peak1-901-8-3-1.00522241794757-1.39487600375387	chr11	35977084	35977535	+	0	NA	exon (NM_011856, exon 9 of 29)	exon (NM_011856, exon 9 of 29)	-183718	NM_170779	211652	Mm.31267	NM_170779		Wwc1	AA408228|AU017197|BC037006|Kibra|mKIAA0869	WW, C2 and coiled-coil domain containing 1	protein-coding
common_peak1-18459-47-22-1.41127946870953-4.4414568823056	chr8	84183264	84184307	+	0	NA	intron (NM_001297596, intron 2 of 24)	Lx6|LINE|L1	317324	NM_001297593	234515	Mm.324468	NM_001024617	ENSMUSG00000037940	Inpp4b	E130107I17Rik	inositol polyphosphate-4-phosphatase, type II	protein-coding
common_peak2-27627-15-39--1.30976334433171-2.45517123152778	chr3	105687565	105688140	+	0	NA	intron (NM_027025, intron 1 of 6)	Lx3C|LINE|L1	14076	NM_001174169	11542	Mm.235024	NM_009631	ENSMUSG00000000562	Adora3	1700001D09Rik|4930578J19Rik|A3AR|A3R|AA3R|ARA3|Gpcr2	adenosine A3 receptor	protein-coding
common_peak2-32334-42-66--0.323759862590588-0.562042725830394	chrX	74269275	74270736	+	0	NA	Intergenic	MTA_Mm-int|LTR|MaLR	-421742	NM_001201395	74987	Mm.107996	NM_001201395	ENSMUSG00000079525	4930468A15Rik	-	RIKEN cDNA 4930468A15 gene	protein-coding
unique_peak2-35283-8-12--0.695217300193522-0.475924844171029	chr17	6079275	6079717	+	0	NA	promoter-TSS (NM_181392)	promoter-TSS (NM_181392)	243	NM_001111017	321007	Mm.5548	NM_177311	ENSMUSG00000015659	Serac1	4930511N22Rik|D17Ertd141e	serine active site containing 1	protein-coding
unique_peak1-1057-10-0-3.35641534500877-3.31132995230379	chr11	79788422	79789046	+	0	NA	Intergenic	HAL1|LINE|L1	-12845	NM_144826	216987	Mm.274961	NM_144826	ENSMUSG00000035575	Utp6	4732497O03Rik|HCA66	UTP6, small subunit (SSU) processome component, homolog (yeast)	protein-coding
unique_peak2-38480-9-26--1.56527409575925-2.17218792383888	chr7	30689240	30689997	+	0	NA	intron (NM_001285798, intron 1 of 4)	intron (NM_001285798, intron 1 of 4)	1505	NM_011754	22689	Mm.86747	NM_011754	ENSMUSG00000062040	Zfp27	Zfp-27|mkr-4|mszf76	zinc finger protein 27	protein-coding
unique_peak1-1990-10-4-1.03448725012141-1.5150158574804	chr15	62078497	62079038	+	0	NA	intron (NR_003368, intron 8 of 8)	intron (NR_003368, intron 8 of 8)	-27761	NR_003523	67552	Mm.484027	NM_026230		H2afy3	4933432H23Rik	H2A histone family, member Y3	pseudo
common_peak1-15047-54-44-0.681232665300059-1.78324025080683	chr3	122363132	122365859	+	0	NA	Intergenic	L1MA4A|LINE|L1	-41863	NM_153118	214459	Mm.209491	NM_153118	ENSMUSG00000039735	Fnbp1l	2610318I01Rik|AW548221|TOCA1|toca-1	formin binding protein 1-like	protein-coding
unique_peak2-38919-6-6--0.241956811677302-0.947717972411649	chr8	18698823	18699241	+	0	NA	intron (NM_007426, intron 6 of 8)	intron (NM_007426, intron 6 of 8)	42530	NM_007426	11601	Mm.439874	NM_007426	ENSMUSG00000031465	Angpt2	Agpt2|Ang-2|Ang2	angiopoietin 2	protein-coding
common_peak2-23287-11-5-0.923731083530457-1.477227296591	chr15	31167954	31168224	+	0	NA	intron (NM_146057, intron 2 of 3)	intron (NM_146057, intron 2 of 3)	13949	NM_146057	223453	Mm.222867	NM_146057	ENSMUSG00000039168	Dap	4921531N22Rik|AI789753|AU040360	death-associated protein	protein-coding
unique_peak2-32446-3-6--1.22133801201688-1.08602067057793	chr1	3551119	3551532	+	0	NA	intron (NM_001011874, intron 1 of 2)	L1_Mur3|LINE|L1	110254	NM_001011874	497097	Mm.454496	NM_001011874	ENSMUSG00000051951	Xkr4	AY534250|Gm210|XRG4|mKIAA1889	X Kell blood group precursor related family member 4	protein-coding
common_peak1-14126-21-26--0.185398236897233-0.318406410381916	chr2	130273229	130274226	+	0	NA	Intergenic	Intergenic	-2287	NM_008980	19262	Mm.224246	NM_008980	ENSMUSG00000027303	Ptpra	Ptpa|Ptpalpha|Rptpalpha|Rptra|Rptralpha	protein tyrosine phosphatase, receptor type, A	protein-coding
unique_peak2-39977-12-29--1.25811461052088-1.65862513589797	chrX	152342011	152343166	+	0	NA	Intergenic	Intergenic	-284718	NM_001093750	211612	Mm.218811	NM_001093750		Ptchd1	9630036J22Rik|AI848149|Gm387	patched domain containing 1	protein-coding
unique_peak2-36545-4-13--1.83081543591085-2.04196296489515	chr2	165648045	165648669	+	0	NA	intron (NM_001291158, intron 12 of 23)	intron (NM_001291158, intron 12 of 23)	35316	NM_001252585	228880	Mm.227598	NM_027230	ENSMUSG00000039671	Zmynd8	1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7	zinc finger, MYND-type containing 8	protein-coding
unique_peak1-3306-8-1-2.00522241794757-2.05605744720049	chr18	78026101	78026621	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	-6928	NM_013831	19201	Mm.57174	NM_013831		Pstpip2	MAYP|cmo	proline-serine-threonine phosphatase-interacting protein 2	protein-coding
unique_peak2-32754-6-6--0.241956811677302-0.947717972411649	chr1	169165684	169166116	+	0	NA	intron (NM_030724, intron 3 of 6)	intron (NM_030724, intron 3 of 6)	49358	NM_030724	80914	Mm.280895	NM_030724	ENSMUSG00000026558	Uck2	AA407809|AI481316|AU018180|AU020720|TSA903|UK|UMK|Umpk	uridine-cytidine kinase 2	protein-coding
common_peak1-13479-9-6-0.382258484346616-1.11707584880836	chr2	18054930	18055416	+	0	NA	intron (NR_045538, intron 8 of 22)	L1MA4A|LINE|L1	68961	NM_001252561	17354	Mm.209175	NM_010804	ENSMUSG00000026743	Mllt10	Af10|B130021D15Rik|D630001B22Rik|mKIAA4140	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	protein-coding
common_peak2-20280-35-45--0.092191697594509-0.310901174692144	chr1	191317398	191318513	+	0	NA	Intergenic	Intergenic	-91803	NM_001281848	16526	Mm.33304	NM_010607	ENSMUSG00000037624	Kcnk2	A430027H14Rik|AI848635|TREK-1	potassium channel, subfamily K, member 2	protein-coding
common_peak2-29738-18-24--0.330937038546373-0.380101753845076	chr6	85936489	85937324	+	0	NA	Intergenic	Intergenic	-25245	NM_028099	72102	Mm.24007	NM_028099	ENSMUSG00000030002	Dusp11	2010300F21Rik|AI481497	dual specificity phosphatase 11 (RNA/RNP complex 1-interacting)	protein-coding
common_peak2-29106-50-82--0.334099114867972-0.677371116707613	chr5	122849869	122850908	+	0	NA	intron (NM_019824, intron 2 of 6)	intron (NM_019824, intron 2 of 6)	8451	NM_019824	56378	Mm.275942	NM_019824	ENSMUSG00000029465	Arpc3	1110006A04Rik|21kDa|AA408672|AI788639|p21-Ar|p21Arc	actin related protein 2/3 complex, subunit 3	protein-coding
unique_peak1-5167-11-5-0.923731083530457-1.477227296591	chr5	28398837	28399431	+	0	NA	intron (NM_153526, intron 1 of 4)	intron (NM_153526, intron 1 of 4)	1182	NM_153526	231070	Mm.30221	NM_153526	ENSMUSG00000045294	Insig1	1810013C12Rik|Insig-1	insulin induced gene 1	protein-coding
common_peak2-23833-37-39-0.204064976598456-0.426350872773373	chr15	101386063	101387656	+	0	NA	intron (NM_177717, intron 5 of 8)	intron (NM_177717, intron 5 of 8)	-5769	NM_053249	114566	Mm.458432	NM_053249	ENSMUSG00000049548	Krt82	Krt2-20	keratin 82	protein-coding
unique_peak2-38832-3-9--1.73591118484664-1.57096726280955	chr7	141461663	141462047	+	0	NA	intron (NM_001081331, intron 6 of 7)	intron (NM_001081331, intron 6 of 7)	-45075	NM_007400	11489	Mm.439714	NM_007400	ENSMUSG00000054555	Adam12	Mltna|mKIAA4001	a disintegrin and metallopeptidase domain 12 (meltrin alpha)	protein-coding
common_peak1-18112-57-56-0.433143025914188-1.0240665209794	chr8	3492653	3494051	+	0	NA	intron (NM_080461, intron 1 of 1)	CpG	214	NM_080461	140482	Mm.299073	NM_080461	ENSMUSG00000047264	Zfp358	Zfend	zinc finger protein 358	protein-coding
common_peak2-29516-20-9-1.16614668970383-1.52222891542741	chr6	34797500	34797998	+	0	NA	intron (NM_178630, intron 18 of 18)	B1_Mus2|SINE|Alu	-15397	NM_197986	68487	Mm.248440	NM_197986	ENSMUSG00000057137	Tmem140	1110007F12Rik	transmembrane protein 140	protein-coding
unique_peak2-36597-12-12--0.0516637330534535-0.309718203022949	chr2	176708297	176708937	+	0	NA	intron (NR_040256, intron 1 of 4)	intron (NR_040256, intron 1 of 4)	-59475	NR_040256	626877	Mm.490744	NR_040256		Gm14405	OTTMUSG00000016573	predicted gene 14405	pseudo
common_peak1-9485-41-53--0.053738797314808-0.303098095889886	chr11	106919765	106920820	+	0	NA	intron (NM_176850, intron 18 of 27)	intron (NM_176850, intron 18 of 27)	30755	NM_001163473	69066	Mm.40679	NM_001163473		1810010H24Rik	OTTMUSG00000003581	RIKEN cDNA 1810010H24 gene	protein-coding
common_peak1-11036-84-112-0.114755096473838-0.393856228441667	chr15	41788240	41789962	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-87835	NM_175456	223513	Mm.148913	NM_175456	ENSMUSG00000042895	Abra	C130068O12Rik|STARS	actin-binding Rho activating protein	protein-coding
common_peak1-13502-51-98--0.554432794477036-1.57329568374622	chr2	72285407	72286713	+	0	NA	Intergenic	Intergenic	-28216	NM_025866	66953	Mm.270676	NM_025866	ENSMUSG00000055612	Cdca7	2310021G01Rik|AU044109|JPO1	cell division cycle associated 7	protein-coding
common_peak1-16041-8-10--0.454209200689727-1.078512453669	chr5	36723904	36724407	+	0	NA	intron (NM_030889, intron 1 of 26)	intron (NM_030889, intron 1 of 26)	16633	NM_030889	81840	Mm.34113	NM_030889	ENSMUSG00000029093	Sorcs2	N28137|mKIAA1329	sortilin-related VPS10 domain containing receptor 2	protein-coding
common_peak2-22012-29-27-0.304935158557507-0.525808162491371	chr12	56534279	56535183	+	0	NA	Intergenic	Intergenic	34919	NM_011968	26443	Mm.30210	NM_011968	ENSMUSG00000021024	Psma6	IOTA	proteasome (prosome, macropain) subunit, alpha type 6	protein-coding
unique_peak1-4297-14-5-1.31425365963649-1.4372489031793	chr2	145862265	145862837	+	0	NA	Intergenic	Intergenic	102031	NM_175280	78774	Mm.136347	NM_175280	ENSMUSG00000037143	Cfap61	4930529M08Rik|BB178539|BC024760	cilia and flagella associated protein 61	protein-coding
common_peak1-7502-152-78-1.65983624251274-20.9006290138859	chr1	14306367	14310452	+	0	NA	Intergenic	Intergenic	-8129	NM_010164	14048	Mm.250185	NM_010164	ENSMUSG00000025932	Eya1	bor	eyes absent 1 homolog (Drosophila)	protein-coding
common_peak2-21316-27-26-0.236658448731768-0.436052471002789	chr11	75178374	75179414	+	0	NA	intron (NM_001102611, intron 2 of 10)	RLTR6_Mm|LTR|ERV1	16959	NM_001102611	319822	Mm.340377	NM_177009	ENSMUSG00000018809	Smyd4	G430029E23Rik	SET and MYND domain containing 4	protein-coding
unique_peak1-2397-8-3-1.00522241794757-1.39487600375387	chr15	98122427	98122978	+	0	NA	intron (NM_173769, intron 3 of 5)	CT-rich|Low_complexity|Low_complexity	3812	NM_173769	239652	Mm.207453	NM_173769	ENSMUSG00000022987	Zfp641	9930016F01Rik|Znf641	zinc finger protein 641	protein-coding
unique_peak2-36556-1-9--2.94898510510411-2.31132995230379	chr2	167950903	167951384	+	0	NA	Intergenic	B1_Mur2|SINE|Alu	28870	NR_040327	77017	Mm.407822	NR_040327	ENSMUSG00000087648	E130018N17Rik	-	RIKEN cDNA E130018N17 gene	ncRNA
common_peak2-31958-22-8-1.47735910364509-2.29727994934156	chr9	65561793	65562329	+	0	NA	intron (NM_172536, intron 3 of 9)	intron (NM_172536, intron 3 of 9)	37706	NM_001301307	18247	Mm.116749	NM_010952	ENSMUSG00000040652	Oaz2	AZ-2|AZ2|Oaz2-ps|Sez15	ornithine decarboxylase antizyme 2	protein-coding
common_peak1-12765-14-8-0.729291158915332-0.771068449301682	chr18	60731388	60732027	+	0	NA	3' UTR (NM_025776, exon 11 of 11)	3' UTR (NM_025776, exon 11 of 11)	11267	NM_025776	66810	Mm.275106	NM_025776	ENSMUSG00000024604	Rbm22	8430430L24Rik	RNA binding motif protein 22	protein-coding
unique_peak1-1319-6-4-0.24347001549294-0.989110657569874	chr12	4768847	4769292	+	0	NA	intron (NM_175431, intron 5 of 6)	intron (NM_175431, intron 5 of 6)	7004	NM_175431	207921	Mm.184898	NM_175431	ENSMUSG00000050545	Fam228b	A830093I24Rik	family with sequence similarity 228, member B	protein-coding
unique_peak1-1568-28-1-4.05295911982146-8.57672668477296	chr13	30659345	30660280	+	0	NA	Intergenic	IAPLTR2_Mm|LTR|ERVK	-22627	NM_025710	66694	Mm.181933	NM_025710	ENSMUSG00000038462	Uqcrfs1	4430402G14Rik|AI875505	ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1	protein-coding
common_peak2-20463-14-9-0.577288065470282-0.630231561310125	chr10	43540496	43541029	+	0	NA	Intergenic	Intergenic	74798	NR_040581	69443	Mm.484042	NR_040581		1700027J07Rik	-	RIKEN cDNA 1700027J07 gene	ncRNA
unique_peak2-35584-12-16--0.4386868561627-0.368541233333383	chr17	73108000	73108781	+	0	NA	Intergenic	B3|SINE|B2	-77654	NM_027166	383295	Mm.277533	NM_027166	ENSMUSG00000039770	Ypel5	2310076K21Rik|CGI-127	yippee-like 5 (Drosophila)	protein-coding
common_peak2-24187-25-55--0.945505016712498-2.0775794634935	chr16	55973824	55975105	+	0	NA	non-coding (NR_027965, exon 1 of 1)	non-coding (NR_027965, exon 1 of 1)	266	NR_027965	66391	Mm.472722	NM_133677		2310061J03Rik	-	RIKEN cDNA 2310061J03 gene	ncRNA
common_peak2-22658-9-8-0.0196884049619079-1.03275496310833	chr13	95327200	95327704	+	0	NA	intron (NM_009680, intron 26 of 26)	MERVL-int|LTR|ERVL	198537	NM_009680	11774	Mm.21185	NM_009680	ENSMUSG00000021686	Ap3b1	AP-3|AU015684|C78395|Hps2|beta3A|pe|pearl|rim2	adaptor-related protein complex 3, beta 1 subunit	protein-coding
common_peak1-9199-19-32--0.641706792696767-0.800403172662453	chr11	80377518	80378221	+	0	NA	intron (NM_177390, intron 20 of 21)	Lx8|LINE|L1	87321	NM_009871	12569	Mm.142275	NM_009871	ENSMUSG00000048895	Cdk5r1	Cdk5r|D11Bwg0379e|p25|p35	cyclin-dependent kinase 5, regulatory subunit 1 (p35)	protein-coding
common_peak1-18336-13-11-0.193509529916613-0.379391706698377	chr8	61927888	61928581	+	0	NA	Intergenic	(TTTG)n|Simple_repeat|Simple_repeat	537682	NM_173411	234290	Mm.39244	NM_173411	ENSMUSG00000049946	BC030500	-	cDNA sequence BC030500	protein-coding
common_peak1-10901-50-57-0.18295932135138-0.444157274383078	chr15	102398891	102400579	+	0	NA	intron (NM_146065, intron 2 of 10)	L1Md_F2|LINE|L1	-44362	NR_033409	54615	Mm.445915	NM_018787	ENSMUSG00000023052	Npff	-	neuropeptide FF-amide peptide precursor	protein-coding
common_peak2-20595-15-16--0.075298090694683-0.301029995663976	chr10	79683783	79684705	+	0	NA	Intergenic	Intergenic	-5099	NM_023431	68114	Mm.273418	NM_023431	ENSMUSG00000020156	Mum1	2610019J09|9430059D04Rik|UBE-1C2	melanoma associated antigen (mutated) 1	protein-coding
common_peak2-27377-31-15-1.22523867081312-2.38724857749548	chr3	86462112	86462785	+	0	NA	intron (NM_030695, intron 46 of 56)	intron (NM_030695, intron 46 of 56)	-110243	NM_011839	23937	Mm.389466	NM_011839	ENSMUSG00000057777	Mab21l2	-	mab-21-like 2 (C. elegans)	protein-coding
common_peak1-19361-25-16-0.774387064094767-1.1282783422172	chrX	13242438	13243646	+	0	NA	exon (NM_175669, exon 4 of 4)	exon (NM_175669, exon 4 of 4)	4553	NM_175669	319200	Mm.383294	NM_175669	ENSMUSG00000047678	Gpr82	-	G protein-coupled receptor 82	protein-coding
unique_peak1-4536-12-1-2.64877598508764-3.36932189928148	chr3	37586992	37587586	+	0	NA	Intergenic	Intergenic	35993	NM_198657	381438	Mm.490549	NM_198657	ENSMUSG00000058174	Gm5148	EG381438	predicted gene 5148	protein-coding
unique_peak2-38411-9-16--0.897849434846119-0.732381977911291	chr7	24112186	24113024	+	0	NA	intron (NM_001004194, intron 2 of 8)	ETnERV3-int|LTR|ERVK	26394	NM_001004194	446099	Mm.442342	NM_001004194	ENSMUSG00000045693	Nlrp4e	4930406H16Rik|Nalp-epsilon|Nalp4e|Nlrp4	NLR family, pyrin domain containing 4E	protein-coding
common_peak1-18285-15-19--0.309763344331706-0.356936432242222	chr8	41348672	41349398	+	0	NA	Intergenic	Lx7|LINE|L1	23272	NM_030610	80857	Mm.425526	NM_030610	ENSMUSG00000031603	Fgf20	-	fibroblast growth factor 20	protein-coding
common_peak1-15240-36-37-0.231393572724169-0.470780655014941	chr4	8646781	8647731	+	0	NA	intron (NM_001277149, intron 1 of 37)	intron (NM_001277149, intron 1 of 37)	29703	NM_001277149	320790	Mm.138792	NM_001033395	ENSMUSG00000041235	Chd7	A730019I05Rik|Cycn|Cyn|Dz|Edy|Flo|GENA 47|GENA 60|Gena 52|Lda|Mt|Obt|Todo|WBE1|Whi|metis	chromodomain helicase DNA binding protein 7	protein-coding
unique_peak2-34045-10-18--0.891512168434816-0.804350088532826	chr12	112949864	112950536	+	0	NA	intron (NM_027404, intron 1 of 1)	intron (NM_027404, intron 1 of 1)	1267	NM_027404	70369	Mm.44239	NM_027404	ENSMUSG00000049792	Bag5	1600025G07Rik|4930405J06Rik	BCL2-associated athanogene 5	protein-coding
common_peak2-31442-55-51-0.50418015301161-1.22525406874155	chr8	104382981	104384825	+	0	NA	Intergenic	Lx6|LINE|L1	925108	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
unique_peak1-3530-17-0-4.21829633820504-6.02059991327962	chr19	20924012	20924839	+	0	NA	intron (NM_028953, intron 9 of 20)	intron (NM_028953, intron 9 of 20)	104267	NM_028953	13409	Mm.219585	NM_028953	ENSMUSG00000024749	Tmc1	4933416G09Rik|Beethoven|Bth|CWEA1|dn	transmembrane channel-like gene family 1	protein-coding
unique_peak1-5152-8-0-3.00522241794757-2.70926996097583	chr5	20499179	20499696	+	0	NA	intron (NM_011203, intron 13 of 17)	intron (NM_011203, intron 13 of 17)	-41797	NM_001080977	242860	Mm.254286	NM_001080977	ENSMUSG00000039968	Rsbn1l	8430412F05Rik|AI447441|C330002G24Rik	round spermatid basic protein 1-like	protein-coding
unique_peak2-37431-5-5--0.289342836727009-0.909929411522249	chr4	150914075	150914472	+	0	NA	intron (NM_001081557, intron 4 of 23)	intron (NM_001081557, intron 4 of 23)	321604	NM_001081557	100072	Mm.318846	NM_001081557	ENSMUSG00000014592	Camta1	1810059M14Rik|2310058O09Rik|AI316882|AW987475|mKIAA0833	calmodulin binding transcription activator 1	protein-coding
common_peak2-27352-30-57--0.688305585635699-1.33966217785262	chr3	79286035	79287290	+	0	NA	intron (NM_001162999, intron 12 of 16)	intron (NM_001162999, intron 12 of 16)	84939	NM_001162999	329679	Mm.244005	NM_001162999	ENSMUSG00000061175	Fnip2	D630023B12Rik|mKIAA1450	folliculin interacting protein 2	protein-coding
unique_peak2-34032-5-7--0.704380336005853-1.01466476204226	chr12	111938349	111938778	+	0	NA	Intergenic	Intergenic	-3958	NM_010480	15519	Mm.1843	NM_010480	ENSMUSG00000021270	Hsp90aa1	86kDa|89kDa|AL024080|AL024147|Hsp86-1|Hsp89|Hsp90|Hspca|hsp4	heat shock protein 90, alpha (cytosolic), class A member 1	protein-coding
unique_peak1-749-11-3-1.50869358425161-1.95434855131066	chr10	112270233	112270808	+	0	NA	Intergenic	Intergenic	95562	NM_001033474	382423	Mm.431239	NM_001033474	ENSMUSG00000074748	Atxn7l3b	4921506J03Rik|6230409E21Rik|AI315132|ENSMUSG00000074747	ataxin 7-like 3B	protein-coding
unique_peak1-1751-9-9--0.132314688483142-1.03275496310833	chr13	107847476	107848110	+	0	NA	Intergenic	Lx8|LINE|L1	35143	NR_015471	100040322	Mm.133867	NR_015471		3830408C21Rik	-	RIKEN cDNA 3830408C21 gene	ncRNA
unique_peak2-37916-3-7--1.41398308995928-1.23214870625617	chr5	144358726	144359060	+	0	NA	Intergenic	B4A|SINE|B4	-24423	NM_011182	19159	Mm.281003	NM_011182	ENSMUSG00000018001	Cyth3	AI648983|ARNO3|CLM3|Grp1|Pscd3	cytohesin 3	protein-coding
common_peak1-8694-92-77-0.806949864840516-3.89664091627155	chr11	59227110	59228874	+	0	NA	intron (NM_144521, intron 4 of 4)	MER21B|LTR|ERV1	35466	NM_144521	67826	Mm.26680	NM_144521	ENSMUSG00000009894	Snap47	1110031B06Rik|SNAP-47	synaptosomal-associated protein, 47	protein-coding
common_peak2-27210-9-7-0.18961340640422-1.05908390183068	chr3	41195624	41196070	+	0	NA	Intergenic	L1MA7|LINE|L1	101274	NR_040385	78706	Mm.366094	NR_040385		C430002E04Rik	-	RIKEN cDNA C430002E04 gene	ncRNA
unique_peak2-38660-4-8--1.19338551529556-1.21878474469819	chr7	97748866	97749264	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-124560	NM_026734	68472	Mm.289791	NM_026734		Tmem126b	1110001A23Rik	transmembrane protein 126B	protein-coding
unique_peak2-35930-5-8--0.874305337448166-1.10484139239135	chr19	7268363	7268844	+	0	NA	intron (NM_134147, intron 4 of 10)	intron (NM_134147, intron 4 of 10)	12171	NM_134150	107260	Mm.203921	NM_134150	ENSMUSG00000024767	Otub1	AI850305	OTU domain, ubiquitin aldehyde binding 1	protein-coding
common_peak1-15343-18-11-0.727956650507195-0.876666802405043	chr4	53397766	53398621	+	0	NA	Intergenic	Intergenic	-55092	NM_001159633	100434	Mm.482207	NM_133891	ENSMUSG00000028412	Slc44a1	2210409B22Rik|4833416H08Rik|AW547365|CHTL1|CTL1|Cdw92	solute carrier family 44, member 1	protein-coding
unique_peak1-6121-24-4-2.47128180788035-4.69785539356838	chr6	129212027	129212812	+	0	NA	Intergenic	RMER12|LTR|ERVK	12968	NM_001033122	12515	Mm.74745	NM_001033122	ENSMUSG00000030156	Cd69	5830438K24Rik|AI452015|AIM|VEA	CD69 antigen	protein-coding
common_peak2-26309-9-5-0.604650905683064-1.21398586181642	chr2	32527637	32528053	+	0	NA	exon (NM_001146348, exon 5 of 15)	exon (NM_001146348, exon 5 of 15)	15441	NR_106168	102465885		NR_106168		Mir8093	mmu-mir-8093	microRNA mir-8093	ncRNA
common_peak1-15335-13-17--0.391452970804544-0.364171515310935	chr4	47474280	47474879	+	0	NA	Intergenic	Lx6|LINE|L1	12660	NM_019998	56737	Mm.22218	NM_019998	ENSMUSG00000039740	Alg2	1110018A23Rik|1300013N08Rik|ALPG2|CDGIi|MNCb-5081	asparagine-linked glycosylation 2 (alpha-1,3-mannosyltransferase)	protein-coding
unique_peak1-5904-18-1-3.31291915122835-4.8766546284749	chr6	87843087	87843763	+	0	NA	intron (NM_017477, intron 8 of 23)	intron (NM_017477, intron 8 of 23)	5459	NM_201244	54161	Mm.258785	NM_017477	ENSMUSG00000030058	Copg1	AU019265|BC056168|Copg|D6Ertd71e|D6Wsu16e	coatomer protein complex, subunit gamma 1	protein-coding
common_peak1-15454-106-148-0.118598334543558-0.438369797233405	chr4	98395233	98396944	+	0	NA	intron (NM_001081202, intron 2 of 4)	AT_rich|Low_complexity|Low_complexity	2643	NM_001081202	381591	Mm.34340	NM_001081202	ENSMUSG00000087166	L1td1	AA546746|AB211064|D76865|ECAT11	LINE-1 type transposase domain containing 1	protein-coding
unique_peak2-38583-2-12--2.61789397440441-2.55640854263862	chr7	67617128	67617554	+	0	NA	Intergenic	Lx2B|LINE|L1	-332236	NM_001082962	20646	Mm.274995	NM_013670	ENSMUSG00000000948	Snrpn	2410045I01Rik|HCERN3|Peg4|Pwcr1|SMN	small nuclear ribonucleoprotein N	protein-coding
unique_peak2-36812-4-8--1.19338551529556-1.21878474469819	chr3	85880907	85881457	+	0	NA	Intergenic	Intergenic	-7174	NM_001082414	27059	Mm.2454	NM_012059	ENSMUSG00000028082	Sh3d19	AW011754|Kryn	SH3 domain protein D19	protein-coding
unique_peak2-33066-5-13--1.51173525806346-1.78669045979184	chr10	78009208	78009794	+	0	NA	Intergenic	B1F|SINE|Alu	-27744	NM_173751	216136	Mm.2644	NM_173751	ENSMUSG00000032763	Ilvbl	5830463I21|AI415009	ilvB (bacterial acetolactate synthase)-like	protein-coding
common_peak2-21706-19-20-0.0103699038829257-0.306326795069978	chr11	106998908	106999505	+	0	NA	Intergenic	Intergenic	-5970	NM_176850	207165	Mm.343986	NM_176850	ENSMUSG00000040481	Bptf	9430093H17Rik|Falz	bromodomain PHD finger transcription factor	protein-coding
common_peak2-31452-20-7-1.48807478459119-2.07034318903805	chr8	104886242	104886653	+	0	NA	Intergenic	Intergenic	422564	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
unique_peak1-1268-7-4-0.477162735410827-1.09384600808989	chr11	117523454	117523958	+	0	NA	intron (NM_198022, intron 1 of 21)	B1_Mm|SINE|Alu	8103	NM_198022	217351	Mm.40272	NM_198022	ENSMUSG00000025571	Tnrc6c	9930033H14Rik|mKIAA1582	trinucleotide repeat containing 6C	protein-coding
common_peak1-12661-158-130-0.997513662939143-10.1442241495876	chr18	36413871	36417444	+	0	NA	Intergenic	Intergenic	-25159	NM_008989	19290	Mm.231802	NM_008989		Pura	CAGER-1|Pur-alpha|ssCRE-BP	purine rich element binding protein A	protein-coding
unique_peak2-38895-4-7--1.02346051385325-1.09384600808989	chr8	10926661	10926986	+	0	NA	non-coding (NR_030715, exon 3 of 3)	non-coding (NR_030715, exon 3 of 3)	1634	NR_030715	665306	Mm.358758	NR_030715	ENSMUSG00000038917	3930402G23Rik	-	RIKEN cDNA 3930402G23 gene	ncRNA
common_peak2-31005-33-42--0.0949271921765691-0.311623594475992	chr8	10663462	10664783	+	0	NA	Intergenic	Intergenic	218332	NR_040705	320014	Mm.403203	NR_040705		B930025P03Rik	-	RIKEN cDNA B930025P03 gene	ncRNA
common_peak2-29099-19-13-0.595332404604082-0.713635438203849	chr5	122518754	122519390	+	0	NA	Intergenic	B4A|SINE|B4	-21238	NM_007804	13048	Mm.156172	NM_007804	ENSMUSG00000042589	Cux2	1700051K22Rik|Cutl2|Cux-2|ENSMUSG00000072641	cut-like homeobox 2	protein-coding
common_peak2-23244-4-12--1.72390023199434-1.85743853830261	chr15	10690642	10691287	+	0	NA	intron (NR_045063, intron 2 of 6)	intron (NR_045063, intron 2 of 6)	46309	NR_045065	75259	Mm.33928	NR_045063	ENSMUSG00000097058	4930556M19Rik	1700009D01Rik|C130022M03Rik	RIKEN cDNA 4930556M19 gene	ncRNA
unique_peak1-5959-8-0-3.00522241794757-2.70926996097583	chr6	93184615	93185052	+	0	NA	Intergenic	Intergenic	294257	NR_015530	330385	Mm.483472	NR_015530	ENSMUSG00000097462	9530026P05Rik	B430306B02	RIKEN cDNA 9530026P05 gene	ncRNA
common_peak2-20100-7-11--0.785871670422967-1.21681515183528	chr1	157561006	157561355	+	0	NA	intron (NM_010712, intron 2 of 5)	intron (NM_010712, intron 2 of 5)	27977	NM_010712	16872	Mm.103624	NM_010712	ENSMUSG00000026468	Lhx4	A330062J17Rik|Gsh-4|Gsh4	LIM homeobox protein 4	protein-coding
common_peak2-22356-6-8--0.60452689106201-1.03789460276074	chr13	24831248	24831648	+	0	NA	Intergenic	Intergenic	22358	NM_020567	57441	Mm.12239	NM_020567	ENSMUSG00000006715	Gmnn	AW546347|Gem	geminin	protein-coding
unique_peak1-2095-9-1-2.18961340640422-2.31132995230379	chr15	37027126	37027578	+	0	NA	Intergenic	Intergenic	-90195	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
common_peak1-16661-19-24--0.241168863113038-0.344491671143527	chr6	127057398	127058085	+	0	NA	intron (NM_177003, intron 1 of 5)	B1F1|SINE|Alu	1829	NM_177003	319801	Mm.101836	NM_177003	ENSMUSG00000038028	9630033F20Rik	AA793651|AI595337|C79710|C85509|Tigar	RIKEN cDNA 9630033F20 gene	protein-coding
common_peak2-30060-9-10--0.269818212233077-1.05503135781948	chr6	128437915	128438556	+	0	NA	intron (NM_007376, intron 29 of 35)	intron (NM_007376, intron 29 of 35)	38503	NM_007376	11287	Mm.260144	NM_007376	ENSMUSG00000030359	Pzp	A1m|A2m|AI893533|MAM	pregnancy zone protein	protein-coding
unique_peak2-33200-10-20--1.03590207776999-1.03889213727317	chr10	111505668	111506338	+	0	NA	intron (NM_027018, intron 2 of 4)	L1_Mur1|LINE|L1	8758	NM_027018	69286	Mm.47058	NM_027018	ENSMUSG00000020213	Glipr1l1	1700011E04Rik	GLI pathogenesis-related 1 like 1	protein-coding
unique_peak2-37189-2-7--1.91745425626332-1.45399745587252	chr4	57727383	57727803	+	0	NA	3' UTR (NM_172868, exon 6 of 6)	3' UTR (NM_172868, exon 6 of 6)	-130527	NM_009649	11641	Mm.467752	NM_009649	ENSMUSG00000038729	Akap2	AA959716|AI649048|Akap-2|Akap-kl|B230340M18Rik|Prka2	A kinase (PRKA) anchor protein 2	protein-coding
unique_peak2-34850-10-20--1.03590207776999-1.03889213727317	chr15	76380525	76381098	+	0	NA	Intergenic	B3|SINE|B2	11438	NM_029643	52710	Mm.28597	NM_029643	ENSMUSG00000022560	Slc52a2	2010003P03Rik|D15Ertd747e|GPCR42|Gpr172b|PAR2|mRFT1	solute carrier protein 52, member 2	protein-coding
unique_peak1-108-15-5-1.4272022498345-1.61682445937017	chr1	55173490	55174237	+	0	NA	Intergenic	ORR1B1-int|LTR|MaLR	-14226	NM_025283	19070	Mm.291037	NM_025283	ENSMUSG00000025979	Mob4	2610109B12Rik|Mobkl3|Phocn|Prei3	MOB family member 4, phocein	protein-coding
common_peak1-16710-42-55--0.0650255941904199-0.303022200133692	chr6	28423367	28424351	+	0	NA	Intergenic	B3|SINE|B2	-6489	NM_019776	56463	Mm.439987	NM_019776	ENSMUSG00000001424	Snd1	AL033314|Tudor-SN	staphylococcal nuclease and tudor domain containing 1	protein-coding
unique_peak1-7116-11-2-1.92373108353046-2.32232533660526	chr9	45502242	45502766	+	0	NA	intron (NM_001081270, intron 11 of 32)	intron (NM_001081270, intron 11 of 32)	134217	NM_001081373	214552	Mm.260103	NM_172531	ENSMUSG00000043987	Cep164	AI450905|BC027092|D030051D21|mKIAA1052	centrosomal protein 164	protein-coding
common_peak1-13905-31-12-1.52479895267203-3.2055306048522	chr2	79618332	79619420	+	0	NA	intron (NM_001290743, intron 4 of 4)	intron (NM_001290743, intron 4 of 4)	70939	NM_001290743	75276	Mm.257373	NM_172420	ENSMUSG00000034683	Ppp1r1c	4930565M23Rik|4930579P15Rik	protein phosphatase 1, regulatory (inhibitor) subunit 1C	protein-coding
common_peak1-12974-26-24-0.284042902383738-0.446094173747083	chr19	4011857	4013017	+	0	NA	intron (NM_133666, intron 1 of 9)	intron (NM_133666, intron 1 of 9)	318	NM_133666	17995	Mm.29842	NM_133666	ENSMUSG00000037916	Ndufv1	CI-51kD	NADH dehydrogenase (ubiquinone) flavoprotein 1	protein-coding
common_peak1-8384-16-34--1.0110193746769-1.55539563639961	chr10	62486167	62486744	+	0	NA	promoter-TSS (NM_026085)	promoter-TSS (NM_026085)	142	NM_001079824	432467	Mm.274784	NM_001079824	ENSMUSG00000020069	Hnrnph3	AA693301|AI666703|Hnrph3	heterogeneous nuclear ribonucleoprotein H3	protein-coding
common_peak1-16161-8-15--0.994777582052429-0.771068449301683	chr5	81019483	81020010	+	0	NA	Intergenic	L2|LINE|L2	-430872	NM_198702	319387	Mm.273631	NM_198702	ENSMUSG00000037605	Lphn3	5430402I23Rik|CIRL-3|D130075K09Rik|Gm1379|LEC3|mKIAA0768	latrophilin 3	protein-coding
unique_peak1-3608-18-1-3.31291915122835-4.8766546284749	chr19	32577645	32578275	+	0	NA	intron (NM_010799, intron 4 of 4)	intron (NM_010799, intron 4 of 4)	17701	NM_010799	17330	Mm.255116	NM_010799	ENSMUSG00000024896	Minpp1	AA408516	multiple inositol polyphosphate histidine phosphatase 1	protein-coding
common_peak1-12247-18-34--0.816363865716615-1.09826982379496	chr17	35821773	35822776	+	0	NA	exon (NM_007584, exon 13 of 18)	exon (NM_007584, exon 13 of 18)	-11647	NM_010364	14885	Mm.10182	NM_010364	ENSMUSG00000001524	Gtf2h4	AW545633|BTF2 p52|TFIIH|p44|p52	general transcription factor II H, polypeptide 4	protein-coding
common_peak1-12833-21-50--1.10293607670526-2.32767243258582	chr18	69925415	69926459	+	0	NA	Intergenic	Intergenic	-159276	NM_201362	381175	Mm.266831	NM_201362	ENSMUSG00000038903	Ccdc68	BC046343	coiled-coil domain containing 68	protein-coding
common_peak2-30121-14-24--0.74464002941708-0.756118839439549	chr6	137519142	137519919	+	0	NA	promoter-TSS (NM_001271587)	promoter-TSS (NM_001271587)	0	NM_001271595	13860	Mm.235346	NM_007945	ENSMUSG00000015766	Eps8	AW261790	epidermal growth factor receptor pathway substrate 8	protein-coding
common_peak1-10538-38-35-0.401527657856218-0.7449989148481	chr14	16249068	16250062	+	0	NA	intron (NM_146052, intron 1 of 1)	intron (NM_146052, intron 1 of 1)	21936	NM_146052	218763	Mm.138039	NM_146052	ENSMUSG00000045201	Lrrc3b	BC019794|LRP15	leucine rich repeat containing 3B	protein-coding
unique_peak2-33632-7-7--0.200909169701811-0.97990265578305	chr11	98342153	98342654	+	0	NA	intron (NM_011771, intron 6 of 7)	intron (NM_011771, intron 6 of 7)	34255	NM_010346	14786	Mm.276702	NM_010346	ENSMUSG00000019312	Grb7	mKIAA4028	growth factor receptor bound protein 7	protein-coding
unique_peak1-5675-24-6-1.98585498071011-3.65509904868667	chr6	31115863	31116939	+	0	NA	non-coding (NR_110469, exon 4 of 4)	non-coding (NR_110469, exon 4 of 4)	52073	NR_110470	232685	Mm.443019	NM_144555		Lincpint	MNCb-1768|Pint|linc-Pint	long intergenic non-protein coding RNA, Trp53 induced transcript	ncRNA
common_peak1-10776-32-47--0.305870481501496-0.462861812831739	chr14	73325203	73326564	+	0	NA	Intergenic	Intergenic	-99527	NR_027860	668489	Mm.158324	NR_027860		Gm9199	EG668489	glycine cleavage system protein H (aminomethyl carrier) pseudogene	pseudo
common_peak2-23134-16-8-0.948338640825749-1.02063122982878	chr14	101804256	101804706	+	0	NA	Intergenic	L1Md_F3|LINE|L1	203927	NM_001081278	210789	Mm.320639	NM_173380	ENSMUSG00000033083	Tbc1d4	5930406J04Rik|A930035N22|AV295684|As160	TBC1 domain family, member 4	protein-coding
common_peak2-28114-13-9-0.456543935750406-0.53895475198017	chr4	89050861	89051330	+	0	NA	Intergenic	Intergenic	-94154	NM_007670	12579	Mm.423094	NM_007670	ENSMUSG00000073802	Cdkn2b	AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b	cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)	protein-coding
common_peak2-32052-30-86--1.27326808635685-4.88454695891955	chr9	85748497	85750076	+	0	NA	Intergenic	B4A|SINE|B4	12827	NM_001164792	21983	Mm.20864	NM_011627	ENSMUSG00000035274	Tpbg	5T4|AW495680|WAIF1	trophoblast glycoprotein	protein-coding
common_peak1-14334-22-11-1.06232160436625-1.51503956548638	chr2	164456933	164458065	+	0	NA	Intergenic	ID4|SINE|ID	6803	NM_001012723	277345	Mm.247244	NM_001012723	ENSMUSG00000070530	Wfdc16	BC043944|WAP16	WAP four-disulfide core domain 16	protein-coding
unique_peak2-32736-2-7--1.91745425626332-1.45399745587252	chr1	163574700	163575122	+	0	NA	Intergenic	Intergenic	143715	NM_001205243	14103	Mm.3355	NM_010177	ENSMUSG00000000817	Fasl	APT1LG1|CD178|CD95-L|CD95L|Fas-L|Faslg|Tnfsf6|gld	Fas ligand (TNF superfamily, member 6)	protein-coding
common_peak2-26002-18-14-0.406028555619833-0.532159081577619	chr19	55542912	55543452	+	0	NA	intron (NM_016862, intron 5 of 7)	intron (NM_016862, intron 5 of 7)	152635	NM_001293686	53611	Mm.258637	NM_016862	ENSMUSG00000024983	Vti1a	1110014F16Rik|1110018K19Rik|4921537J05Rik|MVti1|MVti1a|Vti1|Vti1-rp2	vesicle transport through interaction with t-SNAREs 1A	protein-coding
common_peak1-15983-17-9-0.896368243317676-1.09394599973099	chr5	32182861	32183661	+	0	NA	intron (NM_181281, intron 5 of 10)	Lx5|LINE|L1	182838	NM_181282	107976	Mm.482126	NM_144541	ENSMUSG00000052139	Bre	6030405P19Rik|AI429776|B830038C02Rik	brain and reproductive organ-expressed protein	protein-coding
common_peak1-17263-28-26-0.298071617657994-0.481798116163919	chr6	134802692	134803773	+	0	NA	intron (NM_177687, intron 4 of 4)	intron (NM_177687, intron 4 of 4)	23015	NM_177687	232430	Mm.267010	NM_177687		Crebl2	AI046348|B230205M03	cAMP responsive element binding protein-like 2	protein-coding
unique_peak2-32958-7-10--0.660340788339108-1.12966497611638	chr10	42678817	42679410	+	0	NA	3' UTR (NM_172938, exon 9 of 9)	3' UTR (NM_172938, exon 9 of 9)	98795	NM_172938	268297	Mm.98731	NM_172938	ENSMUSG00000044770	Scml4	9330161D17|mFLJ00197	sex comb on midleg-like 4 (Drosophila)	protein-coding
unique_peak1-6524-17-7-1.21829633820504-1.55050753388977	chr7	120718090	120718872	+	0	NA	Intergenic	Intergenic	61133	NM_027379	67420	Mm.206919	NM_026143	ENSMUSG00000030759	Far1	2600011M19Rik|2900034E22Rik|3732409C05Rik|AI850429|Mlstd2	fatty acyl CoA reductase 1	protein-coding
unique_peak2-32676-2-8--2.08737925770563-1.65811743852845	chr1	135856475	135856972	+	0	NA	Intergenic	Intergenic	-38745	NM_054077	116847	Mm.214514	NM_054077	ENSMUSG00000041577	Prelp	7330409J17Rik|SLRR2A	proline arginine-rich end leucine-rich repeat	protein-coding
unique_peak2-36407-18-28--0.54506184389922-0.591915184368642	chr2	126706738	126707864	+	0	NA	Intergenic	(CCTG)n|Simple_repeat|Simple_repeat	-5304	NM_021450	58800	Mm.244705	NM_021450	ENSMUSG00000027365	Trpm7	2310022G15Rik|4833414K03Rik|5033407O22Rik|CHAK|CHAK1|LTrpC-7|Ltpr7|Ltrpc7|TRPPLIK	transient receptor potential cation channel, subfamily M, member 7	protein-coding
common_peak1-16212-17-28--0.639684656922534-0.677583764578261	chr5	96801447	96802087	+	0	NA	Intergenic	Intergenic	-1207	NM_175473	231470	Mm.291120	NM_175473	ENSMUSG00000034687	Fras1	E130113P14Rik|bl|mKIAA1500	Fraser syndrome 1 homolog (human)	protein-coding
common_peak1-16020-13-10-0.319040412000471-0.446472590016315	chr5	35739518	35740134	+	0	NA	Intergenic	CpG	8060	NM_010445	15371	Mm.358606	NM_010445	ENSMUSG00000067438	Hmx1	Nkx5-3	H6 homeobox 1	protein-coding
unique_peak2-39513-4-12--1.72390023199434-1.85743853830261	chr9	64018116	64018704	+	0	NA	intron (NM_026507, intron 1 of 18)	intron (NM_026507, intron 1 of 18)	2328	NM_026507	68014	Mm.335237	NM_026507	ENSMUSG00000032400	Zwilch	2310031L18Rik	zwilch kinetochore protein	protein-coding
common_peak2-26421-10-8-0.186490343566457-1.078512453669	chr2	60809669	60810207	+	0	NA	intron (NR_045335, intron 1 of 3)	intron (NR_045335, intron 1 of 3)	3270	NR_045335	100038493	Mm.388076	NR_045335	ENSMUSG00000075325	Gm13582	ENSMUSG00000075325|OTTMUSG00000012844	predicted gene 13582	ncRNA
unique_peak1-7415-16-6-1.31090872021046-1.49151883326344	chrX	139813170	139813838	+	0	NA	intron (NM_031258, intron 2 of 8)	intron (NM_031258, intron 2 of 8)	15301	NM_031258	83453	Mm.157697	NM_031258	ENSMUSG00000031283	Chrdl1	CHL|CHL1|Nrln1|VOPT	chordin-like 1	protein-coding
common_peak2-21880-13-12-0.0780323124966764-0.334470287753051	chr12	91848664	91849114	+	0	NA	Intergenic	(TCTA)n|Simple_repeat|Simple_repeat	127989	NM_010050	13371	Mm.21389	NM_010050	ENSMUSG00000007682	Dio2	5DII|AI324267|DIOII	deiodinase, iodothyronine, type II	protein-coding
unique_peak1-2406-21-0-4.56948926526624-NA	chr15	98895461	98896345	+	0	NA	Intergenic	ORR1E|LTR|MaLR	-9501	NM_001162506	78733	Mm.124905	NM_030159	ENSMUSG00000032783	Troap	AW476063|E130301L11Rik|tastin	trophinin associated protein	protein-coding
common_peak1-11885-53-84--0.268417923721773-0.53806889543825	chr16	96126699	96127885	+	0	NA	intron (NR_040484, intron 1 of 3)	RLTR12B|LTR|ERVK	-6972	NR_040485	69776	Mm.120470	NR_040484	ENSMUSG00000086899	1600002D24Rik	-	RIKEN cDNA 1600002D24 gene	ncRNA
common_peak2-20725-15-7-1.01216475055566-1.08658567012551	chr10	98684154	98684589	+	0	NA	Intergenic	Intergenic	-41494	NM_026268	67603	Mm.1791	NM_026268	ENSMUSG00000019960	Dusp6	1300019I03Rik|MKP-3|MKP3|PYST1	dual specificity phosphatase 6	protein-coding
common_peak1-15295-61-92--0.156409481358691-0.401582499764343	chr4	42999253	43000526	+	0	NA	intron (NM_009503, intron 7 of 16)	B1_Mur3|SINE|Alu	13490	NM_009503	269523	Mm.245976	NM_009503	ENSMUSG00000028452	Vcp	3110001E05|CDC48|p97|p97/VCP	valosin containing protein	protein-coding
common_peak2-19632-10-10--0.103016273628528-0.301029995663987	chr1	38988273	38988749	+	0	NA	Intergenic	Intergenic	-7483	NM_001011684	433292	Mm.333709	NM_001011684	ENSMUSG00000067604	Nms	AB164466	neuromedin S	protein-coding
common_peak2-25652-9-4-0.867685311516858-1.36011389749466	chr19	10274360	10274762	+	0	NA	exon (NM_001271615, exon 2 of 2)	exon (NM_001271615, exon 2 of 2)	3872	NM_007999	14156	Mm.2952	NM_007999	ENSMUSG00000024742	Fen1	AW538437|FEN-1	flap structure specific endonuclease 1	protein-coding
unique_peak1-1284-11-5-0.923731083530457-1.477227296591	chr11	118402057	118402598	+	0	NA	intron (NM_001285436, intron 3 of 13)	intron (NM_001285436, intron 3 of 13)	64053	NM_172573	217364	Mm.473963	NM_172573	ENSMUSG00000033857	Engase	C130099A03|D230014K01Rik	endo-beta-N-acetylglucosaminidase	protein-coding
unique_peak2-37700-1-6--2.43441193227435-1.56314192529759	chr5	100798212	100798576	+	0	NA	intron (NM_026969, intron 23 of 27)	intron (NM_026969, intron 23 of 27)	46859	NM_026969	69162	Mm.18634	NM_026969	ENSMUSG00000035325	Sec31a	1810024J13Rik|ABP125|ABP130|AU042160|HSPC275|Sec31l1	Sec31 homolog A (S. cerevisiae)	protein-coding
unique_peak1-6522-6-0-2.5653981103803-2.10720996964787	chr7	120325668	120326191	+	0	NA	Intergenic	Intergenic	-25050	NM_001243048	11865	Mm.440371	NM_007489	ENSMUSG00000055116	Arntl	Arnt3|BMAL1b|Bmal1|MOP3|bHLHe5|bmal1b'	aryl hydrocarbon receptor nuclear translocator-like	protein-coding
unique_peak1-3218-11-5-0.923731083530457-1.477227296591	chr18	59087745	59088510	+	0	NA	intron (NM_175506, intron 7 of 22)	B3|SINE|B2	91709	NM_175506	240322	Mm.71963	NM_175506	ENSMUSG00000053441	Adamts19	4831407I23Rik|AU015154|D230034E10Rik	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 19	protein-coding
common_peak1-10183-29-41--0.28002734216365-0.403996330555226	chr13	41605814	41606663	+	0	NA	Intergenic	G-rich|Low_complexity|Low_complexity	-23509	NM_001111324	18003	Mm.288980	NM_017464	ENSMUSG00000021365	Nedd9	Cas-L|CasL|HEF1|MEF1|Nedd-9|p105	neural precursor cell expressed, developmentally down-regulated gene 9	protein-coding
common_peak1-12595-13-23--0.806490470083387-0.781208772652439	chr18	24121583	24121977	+	0	NA	3' UTR (NM_027007, exon 4 of 4)	3' UTR (NM_027007, exon 4 of 4)	8591	NM_027007	69256	Mm.218343	NM_027007	ENSMUSG00000024276	Zfp397	2810411K16Rik|6720480F11Rik|AI461664	zinc finger protein 397	protein-coding
unique_peak1-5294-12-6-0.841421063030034-1.58711810488664	chr5	67815357	67816039	+	0	NA	intron (NM_001164806, intron 1 of 4)	intron (NM_001164806, intron 1 of 4)	3340	NM_001164806	666938	Mm.101339	NM_001164806	ENSMUSG00000092060	Bend4	D330027G24Rik|EG666938	BEN domain containing 4	protein-coding
common_peak2-25758-75-85-0.312802237041187-0.849626150099139	chr19	29521574	29523213	+	0	NA	intron (NM_021396, intron 4 of 5)	RLTR14-int|LTR|ERV1	36984	NM_021396	58205	Mm.116737	NM_021396		Pdcd1lg2	B7-DC|Btdc|F730015O22Rik|PD-L2	programmed cell death 1 ligand 2	protein-coding
common_peak1-17684-48-30-1.01673084084794-2.89999763406378	chr7	66585637	66587543	+	0	NA	Intergenic	L1M2|LINE|L1	-7071	NR_015479	330544	Mm.9002	NR_015479		C230091D08Rik	-	RIKEN cDNA C230091D08 gene	ncRNA
common_peak2-23935-76-76-0.49515784516838-1.58613072781108	chr16	11455366	11457183	+	0	NA	intron (NM_001290148, intron 6 of 13)	intron (NM_001290148, intron 6 of 13)	50533	NM_001290148	74478	Mm.325831	NM_028964	ENSMUSG00000071669	Snx29	4933437K13Rik|ENSMUSG00000079738|Gm11170|Gm1737|Gm930|Rundc2a	sorting nexin 29	protein-coding
common_peak2-22124-33-36-0.121884196896579-0.346766333527252	chr12	84316507	84317731	+	0	NA	intron (NM_001267625, intron 10 of 10)	intron (NM_001267625, intron 10 of 10)	-276977	NR_046045	74283	Mm.398247	NR_046045		1700085C21Rik	-	RIKEN cDNA 1700085C21 gene	ncRNA
common_peak1-17375-55-51-0.50418015301161-1.22525406874155	chr7	89980324	89981542	+	0	NA	Intergenic	Intergenic	-34910	NM_175366	108797	Mm.306789	NM_175366	ENSMUSG00000057706	Mex3b	4931439A04Rik|M-04814|Rkhd3|mKIAA2009	mex3 homolog B (C. elegans)	protein-coding
common_peak1-12733-16-8-0.948338640825749-1.02063122982878	chr18	54847059	54847915	+	0	NA	Intergenic	Intergenic	76089	NR_045400	328957	Mm.402781	NR_045400		9330117O12Rik	9330117O12	RIKEN cDNA 9330117O12 gene	ncRNA
common_peak1-9758-10-25--1.34402437313232-1.74319850844462	chr12	54713909	54714424	+	0	NA	intron (NM_013780, intron 3 of 11)	intron (NM_013780, intron 3 of 11)	364502	NM_013780	27386	Mm.247044	NM_013780	ENSMUSG00000021010	Npas3	4930423H22Rik|bHLHe12	neuronal PAS domain protein 3	protein-coding
common_peak1-16895-83-46-1.35963377342849-7.8832786555453	chr6	72271284	72274032	+	0	NA	intron (NM_138592, intron 10 of 12)	intron (NM_138592, intron 10 of 12)	18054	NM_147779	20388	Mm.46033	NM_147779	ENSMUSG00000056370	Sftpb	AI562151|SF-B|SP-B|Sftp-3|Sftp3	surfactant associated protein B	protein-coding
common_peak1-13074-61-23-1.79778682902818-8.13100971359915	chr19	6474729	6476667	+	0	NA	intron (NM_001205234, intron 9 of 22)	B4|SINE|B4	56960	NM_001205234	18190	Mm.329616	NM_020253	ENSMUSG00000033768	Nrxn2	6430591O13Rik|mKIAA0921	neurexin II	protein-coding
unique_peak1-7277-13-1-2.77847203063777-3.64038867156802	chr9	99711308	99711863	+	0	NA	Intergenic	L1MC4a|LINE|L1	65004	NM_011440	20669	Mm.261595	NM_011440	ENSMUSG00000053747	Sox14	-	SRY (sex determining region Y)-box 14	protein-coding
unique_peak2-39393-3-6--1.22133801201688-1.08602067057793	chr9	25244349	25244758	+	0	NA	Intergenic	L1MD2|LINE|L1	-44629	NM_026189	67484	Mm.112977	NM_026189	ENSMUSG00000036611	Eepd1	2310005P05Rik|AI481005	endonuclease/exonuclease/phosphatase family domain containing 1	protein-coding
common_peak2-24072-26-37--0.320028421285123-0.460129356264038	chr16	30528582	30529312	+	0	NA	intron (NM_172614, intron 9 of 9)	intron (NM_172614, intron 9 of 9)	21717	NM_172614	224090	Mm.241459	NM_172614		Tmem44	1700007N03Rik|9330161C17Rik|B230220N21	transmembrane protein 44	protein-coding
unique_peak1-5108-10-0-3.35641534500877-3.31132995230379	chr4	154293437	154293963	+	0	NA	Intergenic	MusHAL1|LINE|L1	8486	NM_178931	230979	Mm.215147	NM_178931	ENSMUSG00000042333	Tnfrsf14	Atar|HveA|Hvem|Tnfrs14	tumor necrosis factor receptor superfamily, member 14 (herpesvirus entry mediator)	protein-coding
unique_peak1-6262-32-10-1.81966040058236-4.28341153583535	chr7	19939826	19941066	+	0	NA	TTS (NM_145822)	TTS (NM_145822)	4386	NM_145822	70333	Mm.171370	NM_145822		Cd3eap	1190028F09|2610103M17Rik|ASE-1|Ase1|CAST|PAF49	CD3E antigen, epsilon polypeptide associated protein	protein-coding
unique_peak1-6572-14-4-1.57728806547028-2.4322161449009	chr7	139208446	139209155	+	0	NA	Intergenic	RMER4A|LTR|ERVK	50657	NM_173410	233919	Mm.208740	NM_173410		Gpr26	9630036A11Rik|A730021D22	G protein-coupled receptor 26	protein-coding
common_peak1-17026-12-11-0.0638134843664826-0.337263207250336	chr6	91472927	91473488	+	0	NA	TTS (NM_026309)	TTS (NM_026309)	7178	NM_026309	67678	Mm.246693	NM_026309	ENSMUSG00000034192	Lsm3	1010001J12Rik|2610005D18Rik|6030401D18Rik|SMX4|USS2	LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae)	protein-coding
unique_peak2-33373-7-7--0.200909169701811-0.97990265578305	chr11	40693300	40693774	+	0	NA	Intergenic	Intergenic	-124749	NM_009831	12450	Mm.2103	NM_009831	ENSMUSG00000020326	Ccng1	AI314029	cyclin G1	protein-coding
common_peak2-30159-11-10-0.0492619656143161-0.31137425193576	chr6	146928593	146928989	+	0	NA	intron (NM_001170433, intron 4 of 27)	intron (NM_001170433, intron 4 of 27)	-25848	NM_028509	73344	Mm.391543	NM_028509	ENSMUSG00000040163	1700034J05Rik	-	RIKEN cDNA 1700034J05 gene	protein-coding
common_peak1-10869-40-59--0.247914912857421-0.427481819178421	chr15	25984094	25985578	+	0	NA	Intergenic	RLTR47_MM|LTR|ERV1	70715	NM_144523	52521	Mm.29145	NM_144523	ENSMUSG00000052253	Zfp622	1110033B05Rik|D15Ertd806e|ZPR9|Znf622	zinc finger protein 622	protein-coding
common_peak2-29371-8-18--1.24270509549601-1.15812782348128	chr6	37617162	37617938	+	0	NA	Intergenic	RCHARR1|DNA|MER1_type	137377	NM_145364	208665	Mm.262635	NM_145364	ENSMUSG00000038641	Akr1d1	-	aldo-keto reductase family 1, member D1	protein-coding
common_peak1-16187-14-16--0.188246680892695-0.308035960714963	chr5	92220173	92220817	+	0	NA	Intergenic	Intergenic	-24169	NR_045383	73452	Mm.396233	NR_045383		1700063O14Rik	-	RIKEN cDNA 1700063O14 gene	ncRNA
common_peak1-11341-10-6-0.549060422951165-1.21398586181642	chr15	87654733	87655275	+	0	NA	Intergenic	(CAGA)n|Simple_repeat|Simple_repeat	-28631	NR_105817	102465209		NR_105817	miRBase:MI0021927	Mir6393	mmu-mir-6393	microRNA mir-6393	ncRNA
common_peak2-24053-18-8-1.14299414978604-1.45476480588849	chr16	25485260	25485683	+	0	NA	Intergenic	Intergenic	-198380	NM_001127259	22061	Mm.20894	NM_011641	ENSMUSG00000022510	Trp63	AI462811|Ket|P51/P63|P63|P73l|Tp63|Trp53rp1	transformation related protein 63	protein-coding
unique_peak2-35118-6-6--0.241956811677302-0.947717972411649	chr16	25410615	25410928	+	0	NA	intron (NM_175165, intron 4 of 5)	intron (NM_175165, intron 4 of 5)	123868	NM_175165	71338	Mm.126851	NM_175165	ENSMUSG00000048399	Tprg	5430420C16Rik|Tprg1	transformation related protein 63 regulated	protein-coding
common_peak2-28832-14-10-0.439784541720347-0.519648556297791	chr5	66166110	66166608	+	0	NA	intron (NM_001024917, intron 2 of 19)	intron (NM_001024917, intron 2 of 19)	11599	NM_001024917	333789	Mm.332398	NM_001024917	ENSMUSG00000037795	N4bp2	B3bp|E430014I16|Gm1791|Gm868	NEDD4 binding protein 2	protein-coding
common_peak1-9407-49-17-1.83635882158287-6.61032311367524	chr11	100962316	100963735	+	0	NA	intron (NM_026501, intron 5 of 8)	intron (NM_026501, intron 5 of 8)	-6276	NM_008949	19183	Mm.18344	NM_008949		Psmc3ip	C79099|GT198|HOP2|Tbpip	proteasome (prosome, macropain) 26S subunit, ATPase 3, interacting protein	protein-coding
common_peak1-10603-8-17--1.16470258349474-1.02063122982878	chr14	31669108	31669627	+	0	NA	intron (NM_028839, intron 1 of 7)	intron (NM_028839, intron 1 of 7)	-23076	NM_181390	66175	Mm.220895	NM_181390	ENSMUSG00000042485	Mustn1	1110028G01Rik|Mustang	musculoskeletal, embryonic nuclear protein 1	protein-coding
unique_peak2-37998-6-10--0.894033508256995-1.21398586181642	chr6	28788915	28789364	+	0	NA	intron (NM_019776, intron 16 of 23)	intron (NM_019776, intron 16 of 23)	-7392	NM_138682	192198	Mm.443660	NM_138682	ENSMUSG00000049939	Lrrc4	MBAG1|NGL-2|NLG-2|Nag14	leucine rich repeat containing 4	protein-coding
common_peak2-28721-14-9-0.577288065470282-0.630231561310125	chr5	36072387	36072933	+	0	NA	promoter-TSS (NM_194344)	promoter-TSS (NM_194344)	-735	NM_194344	231147	Mm.290429	NM_194344	ENSMUSG00000036553	Sh3tc1	4631428G15|BC024909	SH3 domain and tetratricopeptide repeats 1	protein-coding
common_peak2-26911-19-13-0.595332404604082-0.713635438203849	chr2	161177411	161177986	+	0	NA	Intergenic	Intergenic	-242906	NM_173368	71389	Mm.122738	NM_173368	ENSMUSG00000057133	Chd6	5430439G14Rik|6330406J24Rik|CHD-6	chromodomain helicase DNA binding protein 6	protein-coding
unique_peak1-7304-24-2-3.20824740204656-6.14077709290365	chr9	117016672	117017830	+	0	NA	intron (NM_001172122, intron 2 of 13)	intron (NM_001172122, intron 2 of 13)	144350	NM_001172123	207181	Mm.326411	NM_178660	ENSMUSG00000039607	Rbms3	6720477E09Rik|8430436O14Rik	RNA binding motif, single stranded interacting protein	protein-coding
common_peak2-30011-12-14--0.25811461052088-0.309074325783021	chr6	124925428	124925919	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-10126	NM_001164089	26894	Mm.244536	NM_012003	ENSMUSG00000030127	Cops7a	D6Ertd35e	COP9 (constitutive photomorphogenic) homolog, subunit 7a (Arabidopsis thaliana)	protein-coding
unique_peak1-5227-12-7-0.648775985087639-0.697979855752659	chr5	38568686	38569269	+	0	NA	Intergenic	B4A|SINE|B4	-18271	NM_010942	18196	Mm.7414	NM_010942	ENSMUSG00000029126	Nsg1	Neep21|m234|p21	neuron specific gene family member 1	protein-coding
common_peak1-14993-6-15--1.4346018896197-1.16633110333236	chr3	108156242	108156753	+	0	NA	intron (NM_019972, intron 16 of 19)	intron (NM_019972, intron 16 of 19)	-11332	NM_026831	68753	Mm.75201	NM_026831	ENSMUSG00000068745	Mybphl	1110037P11Rik	myosin binding protein H-like	protein-coding
unique_peak2-35262-5-7--0.704380336005853-1.01466476204226	chr17	46628836	46629259	+	0	NA	Intergenic	(GAAAA)n|Simple_repeat|Simple_repeat	-4423	NM_001162864	106763	Mm.297613	NM_175351	ENSMUSG00000015599	Ttbk1	AU017937|AW048023|C330008L01Rik	tau tubulin kinase 1	protein-coding
unique_peak1-3406-11-5-0.923731083530457-1.477227296591	chr19	5392381	5392941	+	0	NA	Intergenic	PB1D10|SINE|Alu	-3958	NM_016882	20227	Mm.34562	NM_016882	ENSMUSG00000039148	Sart1	U5-110K	squamous cell carcinoma antigen recognized by T cells 1	protein-coding
unique_peak1-4002-11-1-2.50869358425161-2.83420869758413	chr2	35621841	35622411	+	0	NA	intron (NM_029774, intron 9 of 9)	intron (NM_029774, intron 9 of 9)	-52584	NR_040618	77665	Mm.400558	NR_040618	ENSMUSG00000086449	9030204H09Rik	-	RIKEN cDNA 9030204H09 gene	ncRNA
common_peak2-23151-27-50--0.680879391076259-1.16605326768361	chr14	118937864	118938683	+	0	NA	intron (NM_001163675, intron 20 of 30)	MLT2C1|LTR|ERVL	53421	NR_105815	102465208		NR_105815		Mir6391	mmu-mir-6391	microRNA mir-6391	ncRNA
common_peak2-25110-82-81-0.535711139687651-1.87840493054581	chr18	37643628	37645055	+	0	NA	promoter-TSS (NM_053142)	promoter-TSS (NM_053142)	-334	NM_053142	93888	Mm.87553	NM_053142	ENSMUSG00000046387	Pcdhb17	Pcdhb16|PcdhbQ|mKIAA1621	protocadherin beta 17	protein-coding
common_peak2-27643-24-14-0.886319307159198-1.33403699391683	chr3	107736766	107737644	+	0	NA	Intergenic	Intergenic	-2542	NM_026672	68312	Mm.458189	NM_026672	ENSMUSG00000004035	Gstm7	0610005A07Rik|AI894236|Cd203c	glutathione S-transferase, mu 7	protein-coding
common_peak2-26698-10-14--0.550475250599749-0.446472590016315	chr2	127008779	127009446	+	0	NA	Intergenic	Intergenic	24904	NM_198630	329509	Mm.120738	NM_198630	ENSMUSG00000044145	1810024B03Rik	-	RIKEN cDNA 1810024B03 gene	protein-coding
unique_peak1-2994-9-3-1.18961340640422-1.57096726280955	chr17	81062863	81063391	+	0	NA	intron (NM_001290345, intron 3 of 33)	intron (NM_001290345, intron 3 of 33)	64238	NM_001290345	225028	Mm.311948	NM_001081357	ENSMUSG00000024242	Map4k3	4833416M01Rik|4833416M07Rik|9530052P13Rik|Glk|MAPKKKK3|MEKKK 3|MEKKK3|RAB8IPL1	mitogen-activated protein kinase kinase kinase kinase 3	protein-coding
unique_peak2-38595-6-12--1.13504160776079-1.45089835786865	chr7	75848308	75848651	+	0	NA	Intergenic	Intergenic	45645	NM_001042592	66412	Mm.251199	NM_025549	ENSMUSG00000042659	Arrdc4	2410003C09Rik|AV216361	arrestin domain containing 4	protein-coding
unique_peak1-2859-10-7-0.356415345008769-1.12966497611638	chr17	32924549	32925072	+	0	NA	intron (NM_172458, intron 1 of 3)	CpG	422	NM_172458	208292	Mm.38813	NM_172458		Zfp871	4732483N19|9030612M13Rik|AI118577|AI265322|mKIAA3006	zinc finger protein 871	protein-coding
common_peak2-25268-38-58--0.311190390063311-0.50619083865892	chr18	67774694	67775711	+	0	NA	Intergenic	Intergenic	25788	NM_001081073	225659	Mm.111928	NM_001081073	ENSMUSG00000073542	Cep76	6230425F05Rik|9630013E05	centrosomal protein 76	protein-coding
common_peak2-29242-11-6-0.701338662194009-1.32595962126035	chr5	139377664	139378044	+	0	NA	Intergenic	Lx3C|LINE|L1	81820	NM_001195128	384244	Mm.485002	NM_001195128	ENSMUSG00000094504	Gm5294	EG384244	predicted gene 5294	protein-coding
common_peak2-29733-12-9-0.326847890200276-0.459837087125828	chr6	85333074	85333711	+	0	NA	Intergenic	Lx9|LINE|L1	-8764	NM_001003955	52055	Mm.220334	NM_177466	ENSMUSG00000051343	Rab11fip5	9130206P09Rik|C75969|D6Ertd32e|GAF1|RIP11	RAB11 family interacting protein 5 (class I)	protein-coding
common_peak1-12040-29-33-0.0248272393647717-0.313805205020552	chr17	21008792	21009918	+	0	NA	Intergenic	Intergenic	18260	NM_134196	171230	Mm.222642	NM_134196	ENSMUSG00000050933	Vmn1r231	V1re5|V1re7	vomeronasal 1 receptor 231	protein-coding
common_peak2-30969-91-44-1.58157884927266-10.8316831863338	chr8	122584460	122586191	+	0	NA	Intergenic	Intergenic	40047	NM_133967	102193	Mm.240076	NM_133967	ENSMUSG00000031823	Zdhhc7	AL024087|Gramp2	zinc finger, DHHC domain containing 7	protein-coding
common_peak1-14559-21-36--0.639964100362715-0.825714541185117	chr3	36449513	36450448	+	0	NA	Intergenic	B3|SINE|B2	-1548	NM_019393	50911	Mm.116711	NM_019393	ENSMUSG00000027714	Exosc9	PM/Scl-75|Pmscl1|RRP45|p5|p6	exosome component 9	protein-coding
common_peak1-13101-13-24--0.865384159136956-0.879255460030357	chr19	8702875	8703552	+	0	NA	TTS (NM_008766)	TTS (NM_008766)	10727	NM_008766	18399	Mm.30090	NM_008766	ENSMUSG00000024650	Slc22a6	NKT|Oat1|Orctl1|mOat1	solute carrier family 22 (organic anion transporter), member 6	protein-coding
unique_peak2-35296-1-6--2.43441193227435-1.56314192529759	chr17	10393576	10394047	+	0	NA	Intergenic	Intergenic	118415	NM_021881	19317	Mm.130694	NM_021881	ENSMUSG00000062078	Qk	1110003F05Rik|1500005P18|QkI|l(17)-1Wis|l17Wis1	quaking	protein-coding
unique_peak2-38618-7-14--1.10779976531033-0.817533494790411	chr7	80343042	80343708	+	0	NA	Intergenic	Intergenic	-96421	NR_046024	625243	Mm.261798	NR_046024		Gm6567	-	predicted gene 6567	ncRNA
common_peak1-18237-13-27--1.02888289141984-1.21173582416604	chr8	27177192	27177820	+	0	NA	intron (NM_207659, intron 13 of 21)	intron (NM_207659, intron 13 of 21)	-15575	NR_110583	76604	Mm.437190	NR_110583		1700047A11Rik	4930554C15Rik	RIKEN cDNA 1700047A11 gene	ncRNA
unique_peak2-38032-5-6--0.511735258063458-0.947717972411649	chr6	38135066	38135458	+	0	NA	intron (NM_194061, intron 4 of 19)	L1MA5|LINE|L1	-60676	NM_080467	140494	Mm.462308	NM_080467	ENSMUSG00000038600	Atp6v0a4	Atp6n1b|a4	ATPase, H+ transporting, lysosomal V0 subunit A4	protein-coding
common_peak1-16776-9-5-0.604650905683064-1.21398586181642	chr6	38298216	38298672	+	0	NA	intron (NM_028421, intron 1 of 11)	B1_Mm|SINE|Alu	6159	NM_028864	78781	Mm.25243	NM_028421	ENSMUSG00000029826	Zc3hav1	1200014N16Rik|2900058M19Rik|9130009D18Rik|9830115L13Rik|ARTD13|D6Bwg1452e|ZAP	zinc finger CCCH type, antiviral 1	protein-coding
common_peak1-12579-17-7-1.21829633820504-1.55050753388977	chr18	12741026	12741864	+	0	NA	TTS (NM_010680)	TTS (NM_010680)	-60597	NM_028341	72747	Mm.52526	NM_028341	ENSMUSG00000024424	Ttc39c	1700008N02Rik|2810439F02Rik	tetratricopeptide repeat domain 39C	protein-coding
common_peak1-12952-90-132--0.000977409559038023-0.301849421159484	chr19	53312448	53314471	+	0	NA	intron (NM_001164101, intron 11 of 13)	RMER4B|LTR|ERVK	16236	NR_036590	69319	Mm.57452	NR_036590		1700001K23Rik	-	RIKEN cDNA 1700001K23 gene	ncRNA
unique_peak1-3813-10-4-1.03448725012141-1.5150158574804	chr2	14335659	14336160	+	0	NA	intron (NM_001012305, intron 6 of 12)	L1Md_F2|LINE|L1	25884	NM_001012305	277468	Mm.44662	NM_001012305	ENSMUSG00000036949	Slc39a12	AW046938|Gm731	solute carrier family 39 (zinc transporter), member 12	protein-coding
common_peak1-15601-49-43-0.546852204387887-1.20183724428354	chr4	130663211	130664390	+	0	NA	Intergenic	LTR41|LTR|ERVL	163500	NM_010769	17180	Mm.271796	NM_010769	ENSMUSG00000040533	Matn1	CMP|Crtm|Mat1|matrilin-1	matrilin 1, cartilage matrix protein	protein-coding
unique_peak2-34519-6-21--1.894033508257-2.21753093801298	chr14	52279522	52280180	+	0	NA	intron (NM_001013816, intron 4 of 4)	intron (NM_001013816, intron 4 of 4)	56956	NM_001034102	545047	Mm.425915	NM_001034102	ENSMUSG00000068506	Gm5800	EG545047	predicted gene 5800	protein-coding
unique_peak2-39215-4-8--1.19338551529556-1.21878474469819	chr8	107499293	107499719	+	0	NA	Intergenic	(GAGAA)n|Simple_repeat|Simple_repeat	13888	NM_197999	72361	Mm.26580	NM_197999	ENSMUSG00000031877	Ces2g	2210023G05Rik|Ces2l	carboxylesterase 2G	protein-coding
unique_peak2-34500-8-6-0.197867495889966-1.03789460276074	chr14	46801039	46801478	+	0	NA	Intergenic	MusHAL1|LINE|L1	97556	NR_002875	218963	Mm.282093	NR_002875		Gm1821	-	ubiquitin pseudogene	pseudo
unique_peak2-35013-6-9--0.75652998450706-1.11707584880836	chr15	101902592	101903031	+	0	NA	Intergenic	ID_B1|SINE|B4	-1393	NM_145625	75705	Mm.290022	NM_145625	ENSMUSG00000058655	Eif4b	2310046H11Rik|AL024095|C85189|Eif4a2	eukaryotic translation initiation factor 4B	protein-coding
common_peak1-14994-24-28--0.0647710923598552-0.301029995663979	chr3	108210023	108210772	+	0	NA	intron (NM_001004177, intron 1 of 33)	intron (NM_001004177, intron 1 of 33)	8015	NM_017392	53883	Mm.39728	NM_017392	ENSMUSG00000068740	Celsr2	EGFL2|Flamingo1|flamingo|mKIAA0279|mfmi1	cadherin, EGF LAG seven-pass G-type receptor 2 (flamingo homolog, Drosophila)	protein-coding
common_peak2-24123-10-11--0.228547155712387-0.31137425193576	chr16	33781589	33782166	+	0	NA	Intergenic	Intergenic	-12246	NM_010739	17063	Mm.3177	NM_010739	ENSMUSG00000022824	Muc13	114/A10|14/A10|AI159736|Lrrp|Ly64|NJ-1	mucin 13, epithelial transmembrane	protein-coding
unique_peak1-3259-20-5-1.90311228387004-2.81016724606745	chr18	65577099	65577900	+	0	NA	Intergenic	Intergenic	-13152	NM_172833	240354	Mm.132613	NM_172833	ENSMUSG00000032688	Malt1	A630046N12|D430033E09Rik	mucosa associated lymphoid tissue lymphoma translocation gene 1	protein-coding
common_peak1-13204-65-58-0.609522890115286-1.81538495166911	chr19	22916166	22918361	+	0	NA	intron (NM_177341, intron 8 of 26)	intron (NM_177341, intron 8 of 26)	92168	NR_029591	387200		NR_029591		Mir204	Mirn204|mmu-mir-204	microRNA 204	ncRNA
unique_peak2-34024-7-11--0.785871670422967-1.21681515183528	chr12	108698840	108699611	+	0	NA	Intergenic	Intergenic	274473	NR_045973	74968	Mm.359821	NR_045973	ENSMUSG00000085641	4930465M20Rik	4930431H15Rik	RIKEN cDNA 4930465M20 gene	ncRNA
common_peak1-11848-30-36--0.039777956137077-0.301029995663973	chr16	90283272	90284581	+	0	NA	intron (NM_178923, intron 1 of 19)	CpG	744	NM_178923	224432	Mm.439811	NM_178923	ENSMUSG00000022983	Scaf4	AA517739|Sfrs15|Sra4|Srsf15	SR-related CTD-associated factor 4	protein-coding
unique_peak2-39951-7-19--1.52283726458917-1.55050753388976	chrX	139684405	139685344	+	0	NA	Intergenic	Intergenic	143931	NM_031258	83453	Mm.157697	NM_031258	ENSMUSG00000031283	Chrdl1	CHL|CHL1|Nrln1|VOPT	chordin-like 1	protein-coding
common_peak2-28708-12-7-0.648775985087639-0.697979855752659	chr5	34659750	34660157	+	0	NA	Intergenic	Intergenic	-19086	NM_011278	19822	Mm.21281	NM_011278	ENSMUSG00000029110	Rnf4	AU018689|Gtrgeo8	ring finger protein 4	protein-coding
unique_peak2-33421-4-6--0.830815435910851-0.989110657569874	chr11	60177808	60178235	+	0	NA	intron (NM_029044, intron 4 of 13)	intron (NM_029044, intron 4 of 13)	11139	NM_029044	74665	Mm.133570	NM_029044	ENSMUSG00000056598	Lrrc48	4930449E07Rik	leucine rich repeat containing 48	protein-coding
common_peak1-16076-11-12--0.191746133889479-0.310474156842889	chr5	53947455	53948092	+	0	NA	intron (NM_001080928, intron 1 of 10)	intron (NM_001080928, intron 1 of 10)	755	NM_001080928	19664	Mm.209292	NM_009035	ENSMUSG00000039191	Rbpj	AI843960|CBF1|Igkjrb|Igkrsbp|RBP-J|RBP-J kappa|RBPjk|Rbpsuh	recombination signal binding protein for immunoglobulin kappa J region	protein-coding
common_peak2-23982-5-4--0.0263084308932156-0.909929411522249	chr16	17937885	17938304	+	0	NA	Intergenic	Intergenic	-9782	NM_153150	13358	Mm.229291	NM_153150	ENSMUSG00000003528	Slc25a1	1300019P08Rik|2610100G11Rik|AI194714|Ctp|Dgsj|Slc20a3	solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1	protein-coding
unique_peak1-1051-10-3-1.35641534500877-1.75805390616669	chr11	79264673	79265136	+	0	NA	intron (NM_010897, intron 27 of 57)	URR1A|DNA|MER1_type	32629	NR_045305	104522	Mm.436987	NR_045305	ENSMUSG00000091523	AU040972	AU040954	expressed sequence AU040972	ncRNA
common_peak2-27103-14-15--0.100783839642355-0.301029995663982	chr3	5271932	5272487	+	0	NA	intron (NM_030708, intron 3 of 10)	intron (NM_030708, intron 3 of 10)	-51386	NR_045905	72608	Mm.384359	NR_045905		2700069I18Rik	-	RIKEN cDNA 2700069I18 gene	ncRNA
common_peak1-10188-16-12-0.417823924126969-0.489164546851866	chr13	43212375	43213150	+	0	NA	intron (NM_001005740, intron 8 of 12)	RCHARR1|DNA|MER1_type	-5446	NM_001005748	218194	Mm.160124	NM_198419	ENSMUSG00000054728	Phactr1	9630030F18Rik|Rpel1	phosphatase and actin regulator 1	protein-coding
unique_peak1-2622-8-3-1.00522241794757-1.39487600375387	chr16	38283366	38283781	+	0	NA	intron (NM_001098404, intron 1 of 8)	intron (NM_001098404, intron 1 of 8)	11337	NM_010936	18171	Mm.8509	NM_010936	ENSMUSG00000022809	Nr1i2	PXR|PXR.1|PXR.2|PXR1|SXR|mPXR	nuclear receptor subfamily 1, group I, member 2	protein-coding
common_peak1-13425-14-14--0.00767443525087419-0.308519316180257	chr19	53800481	53801306	+	0	NA	intron (NM_001170847, intron 1 of 13)	intron (NM_001170847, intron 1 of 13)	49097	NM_001170847	73713	Mm.313695	NM_001170847	ENSMUSG00000043639	Rbm20	1110018J23Rik|2010003H22Rik|AI646761	RNA binding motif protein 20	protein-coding
common_peak2-22654-29-30-0.158093770228236-0.384630725886669	chr13	94788907	94789664	+	0	NA	Intergenic	L1Md_A|LINE|L1	-38466	NM_172589	218454	Mm.316553	NM_172589	ENSMUSG00000045312	Lhfpl2	6030465B15|AI447312|AW050335|mKIAA0206|vgim	lipoma HMGIC fusion partner-like 2	protein-coding
common_peak2-29206-8-7-0.00522241794757061-1.00793137938329	chr5	137045519	137046050	+	0	NA	Intergenic	RSINE1|SINE|B4	-2424	NM_001291238	13047	Mm.320317	NM_009986	ENSMUSG00000029705	Cux1	CDP|Cutl1|Cux|Cux-1	cut-like homeobox 1	protein-coding
common_peak1-14609-8-7-0.00522241794757061-1.00793137938329	chr3	52046357	52046841	+	0	NA	Intergenic	MMERGLN-int|LTR|ERV1	-25660	NM_019739	56458	Mm.29891	NM_019739	ENSMUSG00000044167	Foxo1	AI876417|Afxh|FKHR|Fkhr1|Foxo1a	forkhead box O1	protein-coding
unique_peak1-2756-7-1-1.79909083029819-1.80617997398389	chr17	4946895	4947420	+	0	NA	Intergenic	Intergenic	-47917	NM_001085355	239985	Mm.133401	NM_001085355	ENSMUSG00000069729	Arid1b	8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235	AT rich interactive domain 1B (SWI-like)	protein-coding
unique_peak2-39960-3-5--0.998945590680433-0.96108193396963	chrX	141150315	141150654	+	0	NA	intron (NM_001033795, intron 2 of 6)	intron (NM_001033795, intron 2 of 6)	27034	NM_001033795	619287	Mm.387961	NM_001033795	ENSMUSG00000071679	Zcchc16	C230031A03Rik|Mar4	zinc finger, CCHC domain containing 16	protein-coding
unique_peak1-6439-7-2-1.21412832957703-1.45399745587252	chr7	98693124	98693545	+	0	NA	intron (NM_011807, intron 2 of 22)	intron (NM_011807, intron 2 of 22)	454038	NM_011807	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
common_peak2-26880-52-97--0.506449853849509-1.33151214593207	chr2	156720304	156722332	+	0	NA	Intergenic	Intergenic	-8504	NM_029983	77799	Mm.29264	NM_029983	ENSMUSG00000027636	Sla2	A930009E21Rik|AI430952|SLAP-2|SLAP2	Src-like-adaptor 2	protein-coding
unique_peak1-4274-9-4-0.867685311516858-1.36011389749466	chr2	136620065	136620470	+	0	NA	Intergenic	LTR33|LTR|ERVL	81081	NM_001291056	20614	Mm.45953	NM_011428	ENSMUSG00000027273	Snap25	Bdr|GENA70|SNAP-25|SUP|sp	synaptosomal-associated protein 25	protein-coding
common_peak2-31244-10-10--0.103016273628528-0.301029995663987	chr8	70512972	70513425	+	0	NA	Intergenic	RSINE1|SINE|B4	-14725	NM_177698	234353	Mm.32525	NM_027626	ENSMUSG00000030465	Psd3	4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D	pleckstrin and Sec7 domain containing 3	protein-coding
common_peak1-14617-19-36--0.806766038967264-1.16836819221353	chr3	52268294	52269311	+	0	NA	Intergenic	Intergenic	196543	NM_019739	56458	Mm.29891	NM_019739	ENSMUSG00000044167	Foxo1	AI876417|Afxh|FKHR|Fkhr1|Foxo1a	forkhead box O1	protein-coding
common_peak2-25604-16-11-0.533301141546906-0.58239619684445	chr19	8888272	8888781	+	0	NA	intron (NM_027412, intron 3 of 3)	RSINE1|SINE|B4	5258	NM_027412	70387	Mm.261082	NM_027412	ENSMUSG00000071660	Ttc9c	2210019E14Rik|6330408J23Rik	tetratricopeptide repeat domain 9C	protein-coding
unique_peak2-38576-3-5--0.998945590680433-0.96108193396963	chr7	66602281	66602617	+	0	NA	Intergenic	Intergenic	-22930	NR_015479	330544	Mm.9002	NR_015479		C230091D08Rik	-	RIKEN cDNA C230091D08 gene	ncRNA
unique_peak2-38163-3-9--1.73591118484664-1.57096726280955	chr6	87671493	87671963	+	0	NA	Intergenic	Intergenic	-9135	NM_001159697	58229	Mm.333229	NM_021418	ENSMUSG00000068263	Efcc1	Ccdc48	EF hand and coiled-coil domain containing 1	protein-coding
unique_peak1-693-15-3-2.01216475055566-3.03427613622886	chr10	80049838	80050527	+	0	NA	intron (NM_145421, intron 1 of 4)	intron (NM_145421, intron 1 of 4)	2904	NM_145421	216169	Mm.29802	NM_145421	ENSMUSG00000003346	Abhd17a	1700013O15Rik|BC005632|D10Bwg1364e|Fam108a	abhydrolase domain containing 17A	protein-coding
common_peak2-26085-9-7-0.18961340640422-1.05908390183068	chr2	151961455	151961951	+	0	NA	Intergenic	Intergenic	-7642	NM_009328	21407	Mm.3881	NM_009328	ENSMUSG00000068079	Tcf15	Meso1|bHLH-EC2	transcription factor 15	protein-coding
common_peak1-17811-10-13--0.450939577048835-0.386243247519795	chr7	101361423	101361982	+	0	NA	Intergenic	B2_Mm2|SINE|B2	1133313	NM_021427	58238	Mm.113787	NM_021427		Fam181b	A830059I20Rik|AB041569	family with sequence similarity 181, member B	protein-coding
common_peak2-32246-43-54-0.0012034719990428-0.303022200133692	chrX	142965876	142967027	+	0	NA	Intergenic	Lx3B|LINE|L1	-430605	NM_008312	15560	Mm.439670	NM_008312	ENSMUSG00000041380	Htr2c	5-HT2C|5-HT2cR|5-HTR2C|5HT1c|Htr1c|SR1	5-hydroxytryptamine (serotonin) receptor 2C	protein-coding
unique_peak2-35078-9-18--1.05831410703937-0.965105923112245	chr16	16224618	16225222	+	0	NA	intron (NM_026163, intron 1 of 12)	intron (NM_026163, intron 1 of 12)	11482	NM_026163	67451	Mm.2252	NM_026163	ENSMUSG00000041957	Pkp2	1200008D14Rik|1200012P04Rik|AA516617|Pkp2l	plakophilin 2	protein-coding
common_peak1-13998-26-28-0.0699180970308904-0.316008636696532	chr2	104704697	104705642	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-15162	NM_178695	228413	Mm.259609	NM_178695	ENSMUSG00000027171	Prrg4	9930111I18Rik|TMG4	proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	protein-coding
common_peak2-23129-17-16-0.130833496954699-0.356936432242225	chr14	101787819	101788551	+	0	NA	Intergenic	B4A|SINE|B4	-188899	NM_029680	76627	Mm.31415	NM_029680	ENSMUSG00000042888	Prr30	1700110M21Rik	proline rich 30	protein-coding
unique_peak1-317-13-4-1.45654393575041-2.23384849113406	chr1	131867431	131868007	+	0	NA	intron (NM_172485, intron 15 of 27)	intron (NM_172485, intron 15 of 27)	451857	NM_007827	13137	Mm.436759	NM_007827	ENSMUSG00000026401	Daf2	AI323748|Cd55b|Daf|Daf-TM|TM-DAF	decay accelerating factor 2	protein-coding
common_peak2-27613-49-67--0.0811790182251553-0.315949812664558	chr3	104441217	104442264	+	0	NA	promoter-TSS (NM_009196)	promoter-TSS (NM_009196)	-847	NM_009196	20501	Mm.9086	NM_009196	ENSMUSG00000032902	Slc16a1	AL022710|Mct1	solute carrier family 16 (monocarboxylic acid transporters), member 1	protein-coding
unique_peak2-39902-3-9--1.73591118484664-1.57096726280955	chrX	95025954	95026383	+	0	NA	Intergenic	Lx2B|LINE|L1	-318921	NM_013476	11835	Mm.39005	NM_013476		Ar	AW320017|Tfm	androgen receptor	protein-coding
unique_peak2-37562-6-10--0.894033508256995-1.21398586181642	chr5	32352777	32353366	+	0	NA	intron (NM_181281, intron 9 of 10)	intron (NM_181281, intron 9 of 10)	-85774	NM_008037	14284	Mm.24684	NM_008037	ENSMUSG00000029135	Fosl2	Fra-2	fos-like antigen 2	protein-coding
common_peak1-7435-74-74-0.487067886482727-1.4727303365515	chr1	153090904	153092397	+	0	NA	Intergenic	Intergenic	-99978	NM_001039512	117198	Mm.33764	NM_028582	ENSMUSG00000023150	Ivns1abp	1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850	influenza virus NS1A binding protein	protein-coding
common_peak2-32344-23-30--0.232428805877794-0.363124929330844	chrX	75832961	75834143	+	0	NA	Intergenic	Intergenic	-4316	NM_027322	546336	Mm.211712	NM_027322	ENSMUSG00000047996	Prrg1	2010007L08Rik	proline rich Gla (G-carboxyglutamic acid) 1	protein-coding
unique_peak1-72-9-0-3.18961340640422-3.01029995663981	chr1	36462034	36462416	+	0	NA	intron (NM_001277076, intron 24 of 52)	B1F1|SINE|Alu	33089	NM_001277076	100534273	Mm.389112	NM_001277076		Fer1l5	4930533C12Rik	fer-1-like 5 (C. elegans)	protein-coding
common_peak2-30343-14-11-0.314253659636488-0.435191258261915	chr7	25831844	25832415	+	0	NA	intron (NM_008168, intron 11 of 19)	intron (NM_008168, intron 11 of 19)	25259	NM_008168	14809	Mm.2879	NM_008168	ENSMUSG00000003378	Grik5	GluK5|GluRgamma2|KA2	glutamate receptor, ionotropic, kainate 5 (gamma 2)	protein-coding
common_peak2-31472-21-47--1.01547323545492-1.94848605280957	chr8	106058315	106059507	+	0	NA	Intergenic	MLT1D|LTR|MaLR	-68788	NR_045730	71058	Mm.67707	NR_045730		4933400L20Rik	-	RIKEN cDNA 4933400L20 gene	ncRNA
unique_peak2-39110-4-6--0.830815435910851-0.989110657569874	chr8	79638580	79638983	+	0	NA	intron (NM_001083906, intron 3 of 8)	intron (NM_001083906, intron 3 of 8)	212374	NM_001083906	110784	Mm.324393	NM_001083906	ENSMUSG00000031618	Nr3c2	MR|Mlr	nuclear receptor subfamily 3, group C, member 2	protein-coding
common_peak1-15609-9-10--0.269818212233077-1.05503135781948	chr4	132422114	132422593	+	0	NA	intron (NM_133887, intron 3 of 8)	URR1A|DNA|MER1_type	18020	NM_133887	100226	Mm.28237	NM_133887		Stx12	AI850350|AU041521|Stx13	syntaxin 12	protein-coding
common_peak1-18447-11-8-0.338768582809301-1.14218153353838	chr8	83593866	83594470	+	0	NA	Intergenic	Intergenic	-55363	NM_027554	74841	Mm.246018	NM_027554	ENSMUSG00000038250	Usp38	4631402N15Rik|4833420O05Rik|AA536967|AU044701|AW544820|mKIAA1891	ubiquitin specific peptidase 38	protein-coding
unique_peak1-244-10-6-0.549060422951165-1.21398586181642	chr1	90969300	90969849	+	0	NA	intron (NM_133816, intron 1 of 5)	(TG)n|Simple_repeat|Simple_repeat	2537	NM_133816	98402	Mm.170983	NM_133816		Sh3bp4	AI594717|AW227605|BOG25	SH3-domain binding protein 4	protein-coding
unique_peak1-1438-11-6-0.701338662194009-1.32595962126035	chr12	98920200	98920769	+	0	NA	Intergenic	L1Md_T|LINE|L1	577063	NM_008079	14420	Mm.5120	NM_008079	ENSMUSG00000021003	Galc	2310068B06Rik|A930008M05Rik|AW212969|AW413532|Gacy|twi|twitcher	galactosylceramidase	protein-coding
common_peak2-25715-10-4-1.03448725012141-1.5150158574804	chr19	21784600	21785025	+	0	NA	Intergenic	Intergenic	57013	NM_146096	226016	Mm.28796	NM_146096	ENSMUSG00000047368	Abhd17b	5730446C15Rik|Cgi67|Fam108b|Fam108b1	abhydrolase domain containing 17B	protein-coding
unique_peak2-34620-6-4-0.24347001549294-0.989110657569874	chr14	76570338	76570756	+	0	NA	Intergenic	Intergenic	59849	NM_013745	27275	Mm.21138	NM_013745	ENSMUSG00000022009	Nufip1	Nufip	nuclear fragile X mental retardation protein interacting protein 1	protein-coding
unique_peak2-34375-1-14--3.53394760582526-3.64038867156802	chr13	114459150	114459736	+	0	NA	Intergenic	RMER19B|LTR|ERVK	-5559	NM_019960	56534	Mm.41410	NM_019960	ENSMUSG00000051456	Hspb3	2310035K17Rik|AI844863|Hsbp3|spb3	heat shock protein 3	protein-coding
unique_peak1-5626-30-9-1.84774731460451-4.06788929322894	chr6	13060654	13061983	+	0	NA	Intergenic	Intergenic	41559	NM_027992	71900	Mm.27742	NM_027992	ENSMUSG00000029571	Tmem106b	2310036D22Rik|5830455K21Rik|6430519M21Rik|AI428776|AI661344	transmembrane protein 106B	protein-coding
unique_peak1-5635-10-5-0.771452844287613-1.33892459842472	chr6	17247645	17248187	+	0	NA	Intergenic	Intergenic	-8419	NM_007616	12389	Mm.28278	NM_007616	ENSMUSG00000007655	Cav1	Cav|Cav-1	caveolin 1, caveolae protein	protein-coding
common_peak2-29285-14-18--0.348711353085941-0.360333814299795	chr5	143548673	143549279	+	0	NA	exon (NM_178242, exon 4 of 16)	exon (NM_178242, exon 4 of 16)	30090	NM_178242	231861	Mm.354649	NM_178242	ENSMUSG00000039477	Tnrc18	BC025631|EG381742|Zfp469	trinucleotide repeat containing 18	protein-coding
common_peak2-26920-18-25--0.38752056691274-0.421916810733234	chr2	163492911	163493859	+	0	NA	intron (NM_001039390, intron 2 of 4)	(TTTTG)n|Simple_repeat|Simple_repeat	9191	NM_001164053	18769	Mm.10091	NM_011106	ENSMUSG00000035268	Pkig	PKIgamma	protein kinase inhibitor, gamma	protein-coding
common_peak2-26310-6-7--0.434601889619698-0.97990265578305	chr2	32601082	32601494	+	0	NA	intron (NR_045535, intron 5 of 12)	intron (NR_045535, intron 5 of 12)	-4752	NM_027529	70730	Mm.401360	NM_027529	ENSMUSG00000009551	6330409D20Rik	AA517851	RIKEN cDNA 6330409D20 gene	protein-coding
common_peak2-26952-19-21--0.0567442919756109-0.301029995663971	chr2	164832823	164833972	+	0	NA	intron (NM_144892, intron 5 of 7)	intron (NM_144892, intron 5 of 7)	26882	NM_144892	228869	Mm.233080	NM_144892	ENSMUSG00000039804	Ncoa5	CIA	nuclear receptor coactivator 5	protein-coding
unique_peak2-35774-6-9--0.75652998450706-1.11707584880836	chr18	46820538	46821111	+	0	NA	Intergenic	ORR1A2|LTR|MaLR	63466	NM_010120	13664	Mm.262037	NM_010120	ENSMUSG00000057561	Eif1a	C76390|Ef1a|Eftu|Eif4c|eIF-1A|eIF-4C	eukaryotic translation initiation factor 1A	protein-coding
unique_peak1-2023-16-7-1.11826364226806-1.23399803405144	chr15	10738251	10738980	+	0	NA	Intergenic	L1Md_T|LINE|L1	-20191	NR_040357	100502601	Mm.399434	NR_040357		Gm19276	-	predicted gene, 19276	ncRNA
unique_peak1-2624-11-3-1.50869358425161-1.95434855131066	chr16	38295372	38295932	+	0	NA	promoter-TSS (NM_010936)	promoter-TSS (NM_010936)	-742	NM_001098404	18171	Mm.8509	NM_010936	ENSMUSG00000022809	Nr1i2	PXR|PXR.1|PXR.2|PXR1|SXR|mPXR	nuclear receptor subfamily 1, group I, member 2	protein-coding
common_peak1-15617-19-10-0.943255708024389-1.16735254179725	chr4	133104164	133104909	+	0	NA	Intergenic	ID4|SINE|ID	-2594	NM_010948	18221	Mm.69	NM_010948	ENSMUSG00000028851	Nudc	SIG-92|Silg92	nuclear distribution gene C homolog (Aspergillus)	protein-coding
common_peak2-29790-11-9-0.186765489364251-0.344532117358383	chr6	89422831	89423184	+	0	NA	intron (NM_025351, intron 4 of 7)	intron (NM_025351, intron 4 of 7)	-110400	NM_008881	18844	Mm.3789	NM_008881	ENSMUSG00000030084	Plxna1	2600013D04Rik|NOV|PlexA1|Plxn1|mKIAA4053	plexin A1	protein-coding
common_peak2-31386-18-13-0.505564229170747-0.625923329873571	chr8	86445842	86446464	+	0	NA	intron (NM_181039, intron 3 of 22)	MTEa|LTR|MaLR	22156	NM_181039	330814	Mm.260733	NM_181039	ENSMUSG00000013033	Lphn1	2900070I05Rik|AI182398|CLIBA|Lec2|mKIAA0821	latrophilin 1	protein-coding
common_peak2-23934-14-17--0.270708841084668-0.328191099940267	chr16	11254428	11254958	+	0	NA	promoter-TSS (NM_146066)	promoter-TSS (NM_146066)	-155	NR_035466	100316833		NR_035466	miRBase:MI0009934	Mir1945	mmu-mir-1945	microRNA 1945	ncRNA
common_peak2-22286-14-13-0.0918612383000403-0.332077462497413	chr13	13380793	13381679	+	0	NA	Intergenic	Intergenic	104655	NM_031999	83924	Mm.379269	NM_031999	ENSMUSG00000021306	Gpr137b	AI788917|AU016435|AW546472|C730041E01|C80550|C80741|D13Abb1e|Tm7sf1	G protein-coupled receptor 137B	protein-coding
common_peak2-20497-29-39--0.209638014272252-0.348003640999435	chr10	58445808	58446708	+	0	NA	intron (NM_172788, intron 1 of 9)	intron (NM_172788, intron 1 of 9)	170151	NM_172788	237353	Mm.333078	NM_172788	ENSMUSG00000037990	Sh3rf3	4831416G18Rik|Igfbp5-ip|Sh3md4|Sh3rf31	SH3 domain containing ring finger 3	protein-coding
unique_peak2-38564-10-10--0.103016273628528-0.301029995663987	chr7	65484387	65484958	+	0	NA	Intergenic	Intergenic	-428900	NM_009728	11982	Mm.135129	NM_009728	ENSMUSG00000025324	Atp10a	Atp10c|pfatp	ATPase, class V, type 10A	protein-coding
unique_peak2-32598-3-11--1.99894559068043-1.95434855131066	chr1	91052324	91052933	+	0	NA	Intergenic	ORR1E|LTR|MaLR	37499	NR_106129	102465771		NR_106129		Mir7669	mmu-mir-7669	microRNA mir-7669	ncRNA
common_peak2-24343-41-66--0.364940485609112-0.662566236663818	chr17	5189452	5190482	+	0	NA	intron (NM_001085355, intron 4 of 19)	CpG	194893	NM_001085355	239985	Mm.133401	NM_001085355	ENSMUSG00000069729	Arid1b	8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235	AT rich interactive domain 1B (SWI-like)	protein-coding
unique_peak2-35458-8-10--0.454209200689727-1.078512453669	chr17	36042923	36043404	+	0	NA	intron (NM_001142745, intron 6 of 10)	L2a|LINE|L2	3850	NM_001142745	73242	Mm.273155	NM_028476	ENSMUSG00000024426	Atat1	0610011P08Rik|2610008K08Rik|2610110G12Rik|3110080J08Rik|Mec17|TAT	alpha tubulin acetyltransferase 1	protein-coding
common_peak1-10883-28-33--0.0345037214288766-0.301029995664001	chr15	79658547	79659553	+	0	NA	exon (NM_028763, exon 5 of 5)	exon (NM_028763, exon 5 of 5)	5713	NM_001013360	504193	Mm.38438	NM_029079	ENSMUSG00000022421	Npcd	Cbx6-Nptxr	neuronal pentraxin chromo domain	protein-coding
common_peak2-24296-45-79--0.461570069542491-1.00278553979691	chr17	24034294	24035979	+	0	NA	promoter-TSS (NM_001039238)	promoter-TSS (NM_001039238)	-553	NM_001039238	630537	Mm.436677	NM_001039238	ENSMUSG00000096278	Dcpp2	Dcpp-2|EG630537|SPT-2	demilune cell and parotid protein 2	protein-coding
common_peak2-22053-30-48--0.445034434623335-0.674559023890888	chr12	69986337	69987573	+	0	NA	Intergenic	Intergenic	273218	NM_009093	20090	Mm.379006	NM_009093	ENSMUSG00000034892	Rps29	-	ribosomal protein S29	protein-coding
common_peak1-12977-25-12-1.16141018720401-1.87883858401928	chr19	4072326	4073538	+	0	NA	Intergenic	Intergenic	-9556	NM_001160253	29866	Mm.46268	NM_013878	ENSMUSG00000024857	Cabp2	-	calcium binding protein 2	protein-coding
common_peak1-15226-29-25-0.411850362474019-0.664636481544818	chr4	150568930	150570054	+	0	NA	intron (NM_001081557, intron 6 of 23)	intron (NM_001081557, intron 6 of 23)	-137430	NM_009498	22319	Mm.273930	NM_009498	ENSMUSG00000028955	Vamp3	D130027G05Rik|VAMP-3|ceb	vesicle-associated membrane protein 3	protein-coding
unique_peak1-80-6-0-2.5653981103803-2.10720996964787	chr1	40169466	40169953	+	0	NA	intron (NM_010555, intron 4 of 8)	MER58B|DNA|MER1_type	-27013	NR_037980	100047133	Mm.447052	NR_037980	ENSMUSG00000097899	Gm16894	-	predicted gene, 16894	ncRNA
common_peak2-28526-65-99--0.151690250297597-0.394128302109923	chr5	124353705	124354940	+	0	NA	Intergenic	Intergenic	-2962	NM_026603	68184	Mm.28549	NM_026603	ENSMUSG00000023106	Denr	1500003K04Rik	density-regulated protein	protein-coding
common_peak1-9240-14-35--1.27070884108467-2.08778000015695	chr11	86484657	86485280	+	0	NA	intron (NM_029478, intron 1 of 11)	intron (NM_029478, intron 1 of 11)	12356	NM_029478	75909	Mm.390398	NM_029478	ENSMUSG00000018171	Vmp1	3110098I04Rik|4930579A11Rik|AI787464|Tango5|Tmem49|ni-2	vacuole membrane protein 1	protein-coding
unique_peak1-6623-11-5-0.923731083530457-1.477227296591	chr8	8275224	8275815	+	0	NA	Intergenic	Intergenic	385254	NM_010111	13642	Mm.209813	NM_010111	ENSMUSG00000001300	Efnb2	ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1	ephrin B2	protein-coding
common_peak2-31748-11-22--1.0148683718054-1.11267835143409	chr9	19621835	19622628	+	0	NA	Intergenic	Intergenic	9467	NM_146526	258519	Mm.491770	NM_146526	ENSMUSG00000095448	Olfr859	MOR146-3	olfactory receptor 859	protein-coding
unique_peak2-34564-3-7--1.41398308995928-1.23214870625617	chr14	65880908	65881279	+	0	NA	intron (NM_021458, intron 1 of 6)	CpG	207	NM_021458	14365	Mm.214687	NM_021458		Fzd3	AU020229|D930050A07Rik|Fz3	frizzled homolog 3 (Drosophila)	protein-coding
common_peak1-17487-19-19-0.0807592317743238-0.322753776620787	chr7	24884312	24884971	+	0	NA	intron (NM_001289641, intron 3 of 4)	intron (NM_001289641, intron 3 of 4)	-12698	NM_021307	57745	Mm.82678	NM_021307	ENSMUSG00000052675	Zfp112	Znf112|Znf228	zinc finger protein 112	protein-coding
common_peak2-31167-29-31-0.112290080615111-0.353704024845522	chr8	45999916	46000684	+	0	NA	Intergenic	L1_Mm|LINE|L1	-35262	NM_001081286	14107	Mm.27365	NM_001081286	ENSMUSG00000070047	Fat1	2310038E12Rik|AU023433|Fath|mFat1	FAT tumor suppressor homolog 1 (Drosophila)	protein-coding
common_peak2-29917-25-11-1.27688740462395-2.12469164491494	chr6	115481251	115481924	+	0	NA	Intergenic	MT2B|LTR|ERVL	-13135	NM_199033	381802	Mm.291208	NM_199033	ENSMUSG00000042389	Tsen2	AU067695	tRNA splicing endonuclease 2 homolog (S. cerevisiae)	protein-coding
common_peak2-31566-35-68--0.677154198315665-1.53425852299322	chr8	118283651	118285480	+	0	NA	Intergenic	Intergenic	-53771	NM_001025577	17132	Mm.275549	NM_001025577		Maf	2810401A20Rik|A230108G15Rik|AW047063|c-maf	avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog	protein-coding
unique_peak2-39315-1-5--2.2120195109379-1.32905871926422	chr8	124722116	124722438	+	0	NA	Intergenic	Intergenic	-83764	NM_009569	22761	Mm.3105	NM_009569	ENSMUSG00000049577	Zfpm1	FOG|Fog1	zinc finger protein, multitype 1	protein-coding
common_peak2-24958-157-267--0.0461941760397693-0.32122075032417	chr18	3336442	3338788	+	0	NA	promoter-TSS (NM_001110852)	promoter-TSS (NM_001110852)	-28	NM_001110852	12916	Mm.5244	NM_013498	ENSMUSG00000063889	Crem	ICER|ICERI	cAMP responsive element modulator	protein-coding
unique_peak1-6949-11-1-2.50869358425161-2.83420869758413	chr8	111361489	111362012	+	0	NA	intron (NM_007496, intron 3 of 9)	intron (NM_007496, intron 3 of 9)	-99010	NR_037295	100526511		NR_037295		Mir3108	mmu-mir-3108	microRNA 3108	ncRNA
unique_peak1-3249-11-0-3.50869358425161-3.61235994796777	chr18	64652405	64653091	+	0	NA	Intergenic	Intergenic	-4028	NM_007998	14151	Mm.1070	NM_007998	ENSMUSG00000024588	Fech	AI894116|Fcl|fch	ferrochelatase	protein-coding
unique_peak2-39848-3-11--1.99894559068043-1.95434855131066	chrX	60403447	60403904	+	0	NA	Intergenic	(TA)n|Simple_repeat|Simple_repeat	-623489	NR_045442	75545	Mm.391270	NR_045442	ENSMUSG00000085757	1700019B21Rik	-	RIKEN cDNA 1700019B21 gene	ncRNA
common_peak2-23849-7-7--0.200909169701811-0.97990265578305	chr15	102038462	102038864	+	0	NA	intron (NM_001289691, intron 4 of 7)	intron (NM_001289691, intron 4 of 7)	3661	NM_001289695	68744	Mm.352945	NM_153194	ENSMUSG00000046897	Zfp740	1110034O07Rik|AW548228|Znf740	zinc finger protein 740	protein-coding
common_peak2-19995-16-8-0.948338640825749-1.02063122982878	chr1	134096542	134097011	+	0	NA	intron (NM_001033250, intron 1 of 3)	intron (NM_001033250, intron 1 of 3)	2111	NR_029777	723818		NR_029777	miRBase:MI0000646	Mir135b	Mirn135b	microRNA 135b	ncRNA
common_peak1-18868-24-36--0.416243462861233-0.518746288394493	chr9	22070978	22071627	+	0	NA	Intergenic	RLTR25A|LTR|ERVK	-6963	NM_181419	235048	Mm.292381	NM_181419	ENSMUSG00000062794	Zfp599	6720416P20	zinc finger protein 599	protein-coding
unique_peak2-35948-2-7--1.91745425626332-1.45399745587252	chr19	10299448	10299861	+	0	NA	intron (NM_001033481, intron 4 of 25)	intron (NM_001033481, intron 4 of 25)	15584	NM_001033481	225908	Mm.329716	NM_001033481	ENSMUSG00000036098	Myrf	6030439E18|Gm1804|Gm98|Mrf	myelin regulatory factor	protein-coding
unique_peak2-39414-2-11--2.50241675698448-2.32232533660526	chr9	35236209	35236992	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-23061	NM_021339	57810	Mm.80509	NM_021339	ENSMUSG00000038119	Cdon	CDO|Cd0|Orcam	cell adhesion molecule-related/down-regulated by oncogenes	protein-coding
common_peak2-30551-6-9--0.75652998450706-1.11707584880836	chr7	73615991	73616476	+	0	NA	Intergenic	Intergenic	-43870	NM_053080	56847	Mm.140988	NM_053080	ENSMUSG00000015134	Aldh1a3	ALDH6|RALDH3|V1	aldehyde dehydrogenase family 1, subfamily A3	protein-coding
common_peak2-24324-23-59--1.18512309109944-3.15754667551529	chr17	75005248	75006569	+	0	NA	intron (NM_007566, intron 22 of 72)	intron (NM_007566, intron 22 of 72)	78273	NM_007566	12211	Mm.442564	NM_007566	ENSMUSG00000024073	Birc6	A430032G04Rik|A430040A19Rik|AA501170|Bruce|D630005A10Rik|mKIAA1289	baculoviral IAP repeat-containing 6	protein-coding
unique_peak1-7205-20-6-1.68071986253359-2.41165147706372	chr9	67010753	67011779	+	0	NA	non-coding (NR_045748, exon 3 of 3)	non-coding (NR_045748, exon 3 of 3)	29898	NR_045748	100502636	Mm.412607	NR_045748		Gm19299	-	predicted gene, 19299	ncRNA
common_peak1-16315-14-17--0.270708841084668-0.328191099940267	chr5	115134237	115135087	+	0	NA	intron (NM_019821, intron 1 of 4)	intron (NM_019821, intron 1 of 4)	6282	NM_019821	56356	Mm.275766	NM_019821	ENSMUSG00000011884	Gltp	1110001F24Rik|C76925|C77564	glycolipid transfer protein	protein-coding
unique_peak2-39452-3-5--0.998945590680433-0.96108193396963	chr9	50136541	50136912	+	0	NA	Intergenic	Intergenic	-165904	NM_029639	76509	Mm.29959	NM_029639	ENSMUSG00000032068	Plet1	0610037B23Rik|1600029D21Rik|AA407923|AU043048	placenta expressed transcript 1	protein-coding
common_peak1-18661-10-9-0.0344872501214071-1.05503135781948	chr8	117111841	117112406	+	0	NA	intron (NM_019573, intron 5 of 8)	intron (NM_019573, intron 5 of 8)	148571	NM_019573	80707	Mm.440420	NM_019573	ENSMUSG00000004637	Wwox	5330426P09Rik|9030416C10Rik|WOX1	WW domain-containing oxidoreductase	protein-coding
common_peak2-31888-25-35--0.308075096097206-0.423354874519378	chr9	56160126	56160992	+	0	NA	intron (NM_172924, intron 3 of 6)	B3|SINE|B2	105298	NM_172924	244895	Mm.490331	NM_172924	ENSMUSG00000074305	Peak1	1110049L02Rik|9530046P14|AA690169|BE132841|C230081A13Rik|SGK269|mKIAA2002	pseudopodium-enriched atypical kinase 1	protein-coding
common_peak1-14454-6-10--0.894033508256995-1.21398586181642	chr3	14647047	14647505	+	0	NA	intron (NM_024495, intron 2 of 6)	B4A|SINE|B4	5549	NM_024495	71934	Mm.158776	NM_024495	ENSMUSG00000027555	Car13	2310075C21Rik|Ca13	carbonic anhydrase 13	protein-coding
unique_peak1-1671-11-2-1.92373108353046-2.32232533660526	chr13	67810129	67810495	+	0	NA	intron (NM_145622, intron 3 of 3)	(TA)n|Simple_repeat|Simple_repeat	19798	NM_145622	235907	Mm.440123	NM_145622	ENSMUSG00000071281	Zfp65	KRAB5|Zfp71-rs1|pz114	zinc finger protein 65	protein-coding
unique_peak2-32700-6-6--0.241956811677302-0.947717972411649	chr1	151755395	151755815	+	0	NA	intron (NM_008869, intron 3 of 17)	intron (NM_008869, intron 3 of 17)	52809	NM_008869	18783	Mm.4186	NM_008869	ENSMUSG00000056220	Pla2g4a	Pla2g4|cPLA2|cPLA2alpha	phospholipase A2, group IVA (cytosolic, calcium-dependent)	protein-coding
unique_peak1-2043-8-1-2.00522241794757-2.05605744720049	chr15	27326631	27327091	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-69571	NM_020332	11732	Mm.265264	NM_020332	ENSMUSG00000022265	Ank	Ankh|D15Ertd221e|ank|mKIAA1581	progressive ankylosis	protein-coding
unique_peak2-32954-5-14--1.61127093161437-1.95509489018123	chr10	41887299	41887765	+	0	NA	Intergenic	Intergenic	109016	NM_019740	56484	Mm.338613	NM_019740	ENSMUSG00000048756	Foxo3	1110048B16Rik|2010203A17Rik|C76856|FKHRL1|Fkhr2|Foxo3a	forkhead box O3	protein-coding
unique_peak1-4390-13-5-1.19350952991661-1.95509489018123	chr2	164436281	164436825	+	0	NA	intron (NM_001276431, intron 1 of 7)	intron (NM_001276431, intron 1 of 7)	2333	NM_001276432	277343	Mm.383292	NM_001080550	ENSMUSG00000070533	Wfdc8	Gm706	WAP four-disulfide core domain 8	protein-coding
common_peak1-18418-120-154-0.276837215217512-1.03622691193458	chr8	74993152	74994537	+	0	NA	TTS (NR_106036)	TTS (NR_106036)	144	NR_106036	102465647		NR_106036		Mir7068	mmu-mir-7068	microRNA mir-7068	ncRNA
unique_peak1-1370-24-1-3.79320990276772-7.14178280843185	chr12	37241308	37242302	+	0	NA	intron (NM_178629, intron 6 of 9)	intron (NM_178629, intron 6 of 9)	133071	NM_001289503	75847	Mm.261764	NM_178629	ENSMUSG00000043153	Ispd	4930579E17Rik|AV040780	isoprenoid synthase domain containing	protein-coding
unique_peak2-33545-4-4--0.345388608740609-0.864171920961574	chr11	78399340	78399747	+	0	NA	intron (NM_008702, intron 6 of 10)	B1_Mus1|SINE|Alu	-35306	NM_133706	69071	Mm.29431	NM_133706	ENSMUSG00000037278	Tmem97	1810014L12Rik|AI115531|AL022956|D11Bhm182e	transmembrane protein 97	protein-coding
common_peak1-8824-26-19-0.6059709972711-0.841847921495509	chr11	22971800	22972998	+	0	NA	Intergenic	Intergenic	59012	NM_028672	73873	Mm.252406	NM_028672	ENSMUSG00000049811	Fam161a	4930430E16Rik	family with sequence similarity 161, member A	protein-coding
common_peak1-17347-53-31-1.14097301241593-3.80042730159129	chr7	99482357	99483798	+	0	NA	intron (NM_001243046, intron 5 of 14)	intron (NM_001243046, intron 5 of 14)	99597	NM_001243047	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
unique_peak2-39053-2-6--1.72480917832092-1.26211192963361	chr8	70675679	70676029	+	0	NA	Intergenic	L1M2|LINE|L1	-124573	NM_028182	72281	Mm.40974	NM_028182	ENSMUSG00000053886	Sh2d4a	2210402M20Rik|SH2A	SH2 domain containing 4A	protein-coding
unique_peak1-1976-16-5-1.53330114154691-1.80287260729378	chr14	121357806	121358667	+	0	NA	Intergenic	B1F|SINE|Alu	47820	NM_023579	70572	Mm.221452	NM_023579	ENSMUSG00000030662	Ipo5	1110011C18Rik|5730478E03Rik|AA409333|C76941|IMB3|Kpnb3|Ranbp5	importin 5	protein-coding
common_peak2-21075-10-8-0.186490343566457-1.078512453669	chr11	50130889	50131270	+	0	NA	intron (NM_001110500, intron 1 of 14)	intron (NM_001110500, intron 1 of 14)	8096	NM_001110499	12330	Mm.248827	NM_007597	ENSMUSG00000020368	Canx	1110069N15Rik|AI988026|Cnx|D11Ertd153e	calnexin	protein-coding
common_peak1-7563-50-56-0.208050302314211-0.479219382460968	chr1	43098150	43099360	+	0	NA	Intergenic	Intergenic	56712	NM_001013025	73122	Mm.246069	NM_001013025	ENSMUSG00000070939	Tgfbrap1	3110018K12Rik|AU024090|AU042859|AW742551|Trap1	transforming growth factor, beta receptor associated protein 1	protein-coding
common_peak2-27558-16-21--0.341167976369236-0.392630012299441	chr3	96635456	96636141	+	0	NA	promoter-TSS (NM_001146001)	promoter-TSS (NM_001146001)	195	NR_015596	67583	Mm.444284	NR_015596		4930442L01Rik	-	RIKEN cDNA 4930442L01 gene	ncRNA
unique_peak1-1651-10-2-1.77145284428761-2.09384600808989	chr13	59659039	59659561	+	0	NA	promoter-TSS (NM_023328)	promoter-TSS (NM_023328)	-592	NM_023328	67269	Mm.153008	NM_023328	ENSMUSG00000021557	Agtpbp1	1700020N17Rik|2310001G17Rik|2900054O13Rik|4930445M19Rik|5730402G09Rik|CCP1|Nna1|nmf243|pcd	ATP/GTP binding protein 1	protein-coding
common_peak1-11567-15-7-1.01216475055566-1.08658567012551	chr16	13386746	13387528	+	0	NA	intron (NM_001122667, intron 8 of 16)	intron (NM_001122667, intron 8 of 16)	28623	NM_153588	239719	Mm.270643	NM_153588	ENSMUSG00000009569	Mkl2	ENSMUSG00000075401|Gt4-1|MRTF-B|Mrtfb|mKIAA1243	MKL/myocardin-like 2	protein-coding
common_peak2-22370-9-7-0.18961340640422-1.05908390183068	chr13	29504442	29504804	+	0	NA	intron (NM_144536, intron 13 of 15)	intron (NM_144536, intron 13 of 15)	396499	NR_045075	77920	Mm.197051	NR_045073	ENSMUSG00000086363	A330102I10Rik	-	RIKEN cDNA A330102I10 gene	ncRNA
unique_peak2-36007-8-19--1.31670567693979-1.30305656033811	chr19	38395806	38396362	+	0	NA	Intergenic	Intergenic	56812	NM_020278	56839	Mm.298251	NM_020278	ENSMUSG00000067242	Lgi1	BB130740	leucine-rich repeat LGI family, member 1	protein-coding
common_peak1-12723-16-7-1.11826364226806-1.23399803405144	chr18	53249197	53249825	+	0	NA	Intergenic	Intergenic	-86508	NM_026386	67804	Mm.252171	NM_026386	ENSMUSG00000034484	Snx2	0610030A03Rik	sorting nexin 2	protein-coding
unique_peak2-36168-4-10--1.48289213249054-1.5150158574804	chr2	27885819	27886392	+	0	NA	intron (NM_015734, intron 64 of 65)	intron (NM_015734, intron 64 of 65)	54293	NM_010190	14134	Mm.182935	NM_010190	ENSMUSG00000026835	Fcnb	Fcn2	ficolin B	protein-coding
common_peak2-26922-16-11-0.533301141546906-0.58239619684445	chr2	163506539	163507219	+	0	NA	intron (NM_001039390, intron 2 of 4)	B3|SINE|B2	-12894	NM_011106	18769	Mm.10091	NM_011106	ENSMUSG00000035268	Pkig	PKIgamma	protein kinase inhibitor, gamma	protein-coding
common_peak1-11926-23-47--0.863194996212076-1.63155726056134	chr17	66076153	66077232	+	0	NA	intron (NM_133685, intron 1 of 6)	intron (NM_133685, intron 1 of 6)	45400	NM_133685	106572	Mm.29274	NM_133685	ENSMUSG00000056515	Rab31	1700093E07Rik|AI415285|Rab22B	RAB31, member RAS oncogene family	protein-coding
common_peak2-24499-12-8-0.478850983645327-0.562038191119709	chr17	25792522	25793032	+	0	NA	intron (NM_029624, intron 9 of 10)	intron (NM_029624, intron 9 of 10)	-61340	NM_022422	64337	Mm.171123	NM_022422	ENSMUSG00000025739	Gng13	1500031D04Rik|AB030194|Ggamma13	guanine nucleotide binding protein (G protein), gamma 13	protein-coding
common_peak2-31222-37-36-0.316539705856869-0.566504029620424	chr8	69749450	69750293	+	0	NA	Intergenic	Lx6|LINE|L1	-264786	NM_008673	17960	Mm.14125	NM_008673	ENSMUSG00000025588	Nat1	Nat-1	N-acetyl transferase 1	protein-coding
unique_peak2-35621-5-7--0.704380336005853-1.01466476204226	chr17	87024688	87025112	+	0	NA	intron (NM_011104, intron 13 of 14)	intron (NM_011104, intron 13 of 14)	-128304	NM_010137	13819	Mm.1415	NM_010137	ENSMUSG00000024140	Epas1	HIF-2alpha|HIF2A|HLF|HRF|MOP2|bHLHe73	endothelial PAS domain protein 1	protein-coding
common_peak1-16725-14-9-0.577288065470282-0.630231561310125	chr6	30336527	30337296	+	0	NA	intron (NM_172735, intron 2 of 10)	B1_Mur4|SINE|Alu	4099	NM_172735	232679	Mm.29780	NM_172735	ENSMUSG00000039130	Zc3hc1	1110054L24Rik|AU018540|AU019789|HSPC216|Nipa	zinc finger, C3HC type 1	protein-coding
common_peak2-24521-122-127-0.581652356961988-3.1972791897212	chr17	26616351	26619706	+	0	NA	Intergenic	Intergenic	27389	NM_013642	19252	Mm.239041	NM_013642	ENSMUSG00000024190	Dusp1	3CH134|MKP1|Ptpn16|U19515|erp|mkp-1	dual specificity phosphatase 1	protein-coding
unique_peak2-35729-4-6--0.830815435910851-0.989110657569874	chr18	35133984	35134363	+	0	NA	Intergenic	Intergenic	-20168	NM_010481	15526	Mm.209419	NM_010481	ENSMUSG00000024359	Hspa9	74kDa|Csa|Grp75|Hsc74|Hsp74|Hsp74a|Hspa9a|Mortalin|Mot-2|Mot2|Mthsp70|Pbp74	heat shock protein 9	protein-coding
unique_peak2-33304-5-13--1.51173525806346-1.78669045979184	chr11	4637768	4638372	+	0	NA	TTS (NM_138948)	TTS (NM_138948)	8711	NM_138948	192650	Mm.207056	NM_138948		Cabp7	-	calcium binding protein 7	protein-coding
unique_peak1-3107-16-5-1.53330114154691-1.80287260729378	chr18	27598724	27599474	+	0	NA	Intergenic	Intergenic	-1119566	NR_045398	320624	Mm.50107	NR_045398		4930474G06Rik	-	RIKEN cDNA 4930474G06 gene	ncRNA
common_peak2-30335-14-14--0.00767443525087419-0.308519316180257	chr7	25278914	25279452	+	0	NA	intron (NM_153112, intron 1 of 8)	intron (NM_153112, intron 1 of 8)	12141	NM_153112	260299	Mm.178322	NM_153112	ENSMUSG00000054793	Cadm4	Igdf4c|Igsf4c|Tsll2	cell adhesion molecule 4	protein-coding
unique_peak1-243-12-1-2.64877598508764-3.36932189928148	chr1	90909796	90910426	+	0	NA	Intergenic	Intergenic	-2577	NR_040471	73475	Mm.491040	NR_040471		1700067G17Rik	-	RIKEN cDNA 1700067G17 gene	ncRNA
unique_peak2-34479-5-5--0.289342836727009-0.909929411522249	chr14	34103314	34103745	+	0	NA	intron (NM_153800, intron 3 of 10)	intron (NM_153800, intron 3 of 10)	73520	NM_153800	239027	Mm.318350	NM_153800	ENSMUSG00000063506	Arhgap22	B230341L19Rik|RHOGAP2|p68RacGAP	Rho GTPase activating protein 22	protein-coding
common_peak1-12889-31-58--0.657404378548718-1.31742449843084	chr18	80255224	80256753	+	0	NA	intron (NM_053117, intron 1 of 2)	L2b|LINE|L2	12354	NM_053117	93737	Mm.24678	NM_053117	ENSMUSG00000056214	Pard6g	2410049N21Rik|Par6a	par-6 family cell polarity regulator gamma	protein-coding
common_peak1-11938-86-141--0.174111325472329-0.484115622826869	chr17	3114139	3115793	+	0	NA	promoter-TSS (NM_134123)	promoter-TSS (NM_134123)	-6	NM_134123	106583	Mm.124373	NM_134123	ENSMUSG00000046201	Scaf8	A630086M08Rik|A930036P18Rik|AA408306|AI447644|AI448652|AU015035|Rbm16|mKIAA1116	SR-related CTD-associated factor 8	protein-coding
common_peak2-20645-9-27--1.61774151565338-2.34622402919155	chr10	81136550	81137206	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	25064	NM_001142963	100233208	Mm.327168	NM_001142963		Gm10778	ENSMUSG00000074860	predicted gene 10778	protein-coding
unique_peak2-35718-6-6--0.241956811677302-0.947717972411649	chr18	33999108	33999477	+	0	NA	intron (NM_013512, intron 13 of 23)	RLTR11A|LTR|ERVK	44746	NR_038151	69749	Mm.248787	NR_038151	ENSMUSG00000087590	2410004N09Rik	-	RIKEN cDNA 2410004N09 gene	ncRNA
unique_peak1-3380-20-4-2.16614668970383-3.28004177908661	chr19	3811149	3812059	+	0	NA	intron (NM_001167885, intron 12 of 12)	intron (NM_001167885, intron 12 of 12)	-40169	NM_001271496	12660	Mm.225505	NM_013490	ENSMUSG00000024843	Chka	CK|CK/EK-alpha|Chetk-alpha|Chk|ChoK|EK|EtnK-alpha	choline kinase alpha	protein-coding
common_peak1-17239-39-65--0.4286328724393-0.790272552182767	chr6	128299827	128301390	+	0	NA	intron (NM_011657, intron 1 of 10)	B3A|SINE|B2	5261	NM_011657	22158	Mm.291783	NM_011657	ENSMUSG00000001521	Tulp3	2310022L06Rik|AI316887	tubby-like protein 3	protein-coding
common_peak1-10006-26-11-1.34293659143731-2.2880788707084	chr13	5802660	5803700	+	0	NA	Intergenic	Intergenic	54158	NR_045891	71867	Mm.179181	NR_045891		1700016G22Rik	-	RIKEN cDNA 1700016G22 gene	ncRNA
unique_peak1-2721-14-3-1.89921616035764-2.80787975886178	chr16	92612877	92613607	+	0	NA	intron (NM_001111022, intron 6 of 6)	intron (NM_001111022, intron 6 of 6)	84332	NM_001111023	12394	Mm.4081	NM_009821	ENSMUSG00000022952	Runx1	AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b	runt related transcription factor 1	protein-coding
common_peak2-22475-50-40-0.683388311860869-1.70008721686218	chr13	48565746	48566670	+	0	NA	Intergenic	ORR1B2|LTR|MaLR	42571	NM_001164575	67911	Mm.251375	NM_026450	ENSMUSG00000050954	Zfp169	1700025J14Rik|4930429A13Rik|BE688704	zinc finger protein 169	protein-coding
unique_peak2-35463-7-10--0.660340788339108-1.12966497611638	chr17	42937953	42938612	+	0	NA	intron (NM_009847, intron 16 of 17)	Lx8|LINE|L1	-59154	NM_001033493	435529	Mm.136350	NM_001033493	ENSMUSG00000057899	Gpr111	PGR20	G protein-coupled receptor 111	protein-coding
common_peak1-15441-42-39-0.420401232979821-0.828688081372012	chr4	94602371	94603557	+	0	NA	Intergenic	(A)n|Simple_repeat|Simple_repeat	-7430	NM_001290623	67753	Mm.25097	NM_027089	ENSMUSG00000028575	Eqtn	1700028B15Rik|4930579C15Rik|Afaf|C81058|Eqtl|Eqts	equatorin, sperm acrosome associated	protein-coding
common_peak1-16012-12-10-0.189344366450341-0.386243247519795	chr5	34659538	34660169	+	0	NA	Intergenic	L1MD|LINE|L1	-19186	NM_011278	19822	Mm.21281	NM_011278	ENSMUSG00000029110	Rnf4	AU018689|Gtrgeo8	ring finger protein 4	protein-coding
unique_peak1-1783-10-7-0.356415345008769-1.12966497611638	chr14	7944448	7945119	+	0	NA	intron (NM_001270812, intron 2 of 5).3	(TTTTTG)n|Simple_repeat|Simple_repeat	-6812	NM_001024712	100042149	Mm.396155	NM_001024712	ENSMUSG00000092167	Gm3696	544988|ENSMUSG00000056940|Gm10014	predicted gene 3696	protein-coding
common_peak1-16893-21-22-0.0459273092092225-0.319918318021793	chr6	72242453	72243561	+	0	NA	Intergenic	Intergenic	-11597	NM_001282071	20388	Mm.46033	NM_147779	ENSMUSG00000056370	Sftpb	AI562151|SF-B|SP-B|Sftp-3|Sftp3	surfactant associated protein B	protein-coding
unique_peak1-3657-10-0-3.35641534500877-3.31132995230379	chr19	39062539	39063085	+	0	NA	Intergenic	Intergenic	-18697	NM_028089	72082	Mm.142581	NM_028089	ENSMUSG00000025002	Cyp2c55	2010318C06Rik	cytochrome P450, family 2, subfamily c, polypeptide 55	protein-coding
common_peak1-18852-6-14--1.34149248522822-1.01572999746118	chr9	20642818	20643336	+	0	NA	Intergenic	PB1D9|SINE|Alu	20129	NM_001030290	235033	Mm.297661	NM_001030290	ENSMUSG00000053773	Rdh8	Gm182|prRDH	retinol dehydrogenase 8	protein-coding
common_peak2-23218-66-109--0.262876049098819-0.613619973925068	chr15	3978948	3980151	+	0	NA	intron (NM_024188, intron 1 of 16)	B1_Mm|SINE|Alu	-2143	NR_028266	414066	Mm.394461	NR_028266		BC037032	-	cDNA Sequence BC037032	ncRNA
common_peak2-31731-14-15--0.100783839642355-0.301029995663982	chr9	13826572	13827018	+	0	NA	Intergenic	ID_B1|SINE|B4	194624	NM_176836	72826	Mm.246174	NM_176836	ENSMUSG00000037808	Fam76b	2810485I05Rik|C78303	family with sequence similarity 76, member B	protein-coding
common_peak1-9142-69-67-0.507679606008393-1.49942820951552	chr11	75732901	75733886	+	0	NA	intron (NM_001291159, intron 1 of 4)	(TTTG)n|Simple_repeat|Simple_repeat	6000	NM_001291159	380714	Mm.425697	NM_029548	ENSMUSG00000020847	Rph3al	Gm1753|Noc2	rabphilin 3A-like (without C2 domains)	protein-coding
common_peak1-15015-12-12--0.0516637330534535-0.309718203022949	chr3	116594316	116594895	+	0	NA	intron (NM_009146, intron 8 of 16)	intron (NM_009146, intron 8 of 16)	30007	NM_009146	20321	Mm.66293	NM_009146	ENSMUSG00000033386	Frrs1	AI131732|Sdfr2	ferric-chelate reductase 1	protein-coding
unique_peak2-35786-6-9--0.75652998450706-1.11707584880836	chr18	54991820	54992296	+	0	NA	Intergenic	MLT1A1|LTR|MaLR	157776	NM_175751	269023	Mm.192984	NM_175751	ENSMUSG00000052713	Zfp608	4932417D18Rik|D430007A19Rik|Znf608	zinc finger protein 608	protein-coding
common_peak2-30729-8-10--0.454209200689727-1.078512453669	chr7	116000638	116001085	+	0	NA	Intergenic	Lx|LINE|L1	-11339	NM_146725	258720	Mm.377654	NM_146725	ENSMUSG00000062434	Olfr516	MOR268-2	olfactory receptor 516	protein-coding
common_peak2-31118-12-12--0.0516637330534535-0.309718203022949	chr8	33896672	33897166	+	0	NA	Intergenic	Intergenic	163579	NM_001177589	100042715	Mm.291093	NM_001177589		Gm3985	-	predicted gene 3985	protein-coding
unique_peak1-6569-11-1-2.50869358425161-2.83420869758413	chr7	134068053	134068636	+	0	NA	Intergenic	Intergenic	-4049	NM_172747	233877	Mm.245897	NM_172747	ENSMUSG00000030685	Kctd13	1500003N18Rik|AV259508|PDIP1alpha|Pdip1|Poldip1	potassium channel tetramerisation domain containing 13	protein-coding
common_peak1-14394-11-11--0.0762689164695427-0.301029995663976	chr2	172439775	172440253	+	0	NA	Intergenic	(CCA)n|Simple_repeat|Simple_repeat	63523	NM_001159696	21420	Mm.3629	NM_009335	ENSMUSG00000028640	Tfap2c	AA409384|AP2gamma|Ap-2.2|Stra2|Tcfap2c	transcription factor AP-2, gamma	protein-coding
unique_peak1-6769-14-1-2.89921616035764-3.91338994363176	chr8	61477076	61477854	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	86913	NM_173411	234290	Mm.39244	NM_173411	ENSMUSG00000049946	BC030500	-	cDNA sequence BC030500	protein-coding
unique_peak1-662-8-4-0.683294323060208-1.21878474469819	chr10	59942561	59943127	+	0	NA	intron (NM_023370, intron 12 of 68)	B1_Mm|SINE|Alu	80370	NM_001164374	100302688	Mm.444135	NM_001164374	ENSMUSG00000090439	Gm17455	-	predicted gene, 17455	protein-coding
common_peak2-24218-23-30--0.232428805877794-0.363124929330844	chr16	78455993	78457287	+	0	NA	Intergenic	Intergenic	-79214	NM_001297747	12228	Mm.392910	NM_009770	ENSMUSG00000022863	Btg3	ANA|tob5	B cell translocation gene 3	protein-coding
common_peak2-28912-16-28--0.73971735285951-0.890873221665474	chr5	92309307	92309999	+	0	NA	Intergenic	ORR1A4|LTR|MaLR	81929	NR_073442	68098	Mm.159453	NM_026557	ENSMUSG00000029397	Rchy1	ARNIP|CHIMP|Pirh2|Zfp363|Znf363	ring finger and CHY zinc finger domain containing 1	protein-coding
unique_peak2-39792-12-15--0.351224014912361-0.332077462497413	chrX	12936647	12937163	+	0	NA	Intergenic	Intergenic	78757	NM_010028	13205	Mm.289662	NM_010028	ENSMUSG00000000787	Ddx3x	D1Pas1-rs2|Ddx3|Fin14	DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3, X-linked	protein-coding
unique_peak1-1873-8-3-1.00522241794757-1.39487600375387	chr14	57571657	57572140	+	0	NA	intron (NM_029498, intron 20 of 23)	Lx5|LINE|L1	-62073	NM_001256060	432860	Mm.390718	NM_001256060	ENSMUSG00000096144	B020004C17Rik	-	RIKEN cDNA B020004C17 gene	protein-coding
common_peak2-25332-18-10-0.853487532591054-1.03889213727317	chr18	76063470	76064036	+	0	NA	intron (NM_145356, intron 2 of 4)	ID_B1|SINE|B4	83921	NM_145356	207259	Mm.159332	NM_145356	ENSMUSG00000044646	Zbtb7c	B230208J24Rik|Kr-pok|Zbtb36	zinc finger and BTB domain containing 7C	protein-coding
unique_peak1-1852-7-3-0.799090830298189-1.23214870625617	chr14	50895804	50896245	+	0	NA	Intergenic	Lx9|LINE|L1	5922	NM_146665	258659	Mm.377622	NM_146665	ENSMUSG00000091873	Olfr732	MOR241-1	olfactory receptor 732	protein-coding
unique_peak2-37718-1-9--2.94898510510411-2.31132995230379	chr5	105154429	105154979	+	0	NA	Intergenic	Intergenic	134383	NM_001039231	626391	Mm.385405	NM_001039231		Zfp951	C230055K05Rik	zinc finger protein 951	protein-coding
common_peak1-15119-17-25--0.482143379936054-0.479250674391597	chr3	137918537	137919398	+	0	NA	Intergenic	Intergenic	-16340	NR_045760	68369	Mm.441136	NR_045760	ENSMUSG00000099146	0610031O16Rik	-	RIKEN cDNA 0610031O16 gene	ncRNA
common_peak1-9766-31-32-0.18084455145467-0.379775532323848	chr12	55124303	55125192	+	0	NA	intron (NM_013780, intron 7 of 11)	intron (NM_013780, intron 7 of 11)	180114	NM_028133	112407	Mm.133037	NM_028133	ENSMUSG00000035105	Egln3	2610021G09Rik|AI505553|AI648162|Hif-p4h-3|Phd3|SM-20	egl-9 family hypoxia-inducible factor 3	protein-coding
common_peak1-8180-13-3-1.77847203063777-2.58603100924543	chr10	59424466	59425111	+	0	NA	Intergenic	(TTTA)n|Simple_repeat|Simple_repeat	-10270	NM_029083	74747	Mm.21697	NM_029083	ENSMUSG00000020108	Ddit4	5830413E08Rik|AA415483|REDD1|Rtp801|dig2	DNA-damage-inducible transcript 4	protein-coding
common_peak1-15122-27-35--0.178379050547076-0.330208782692001	chr3	138061146	138062152	+	0	NA	Intergenic	Lx|LINE|L1	-16812	NM_011996	26876	Mm.158750	NM_011996	ENSMUSG00000037797	Adh4	Adh2	alcohol dehydrogenase 4 (class II), pi polypeptide	protein-coding
common_peak2-22735-56-28-1.37761483031167-5.13490503638093	chr13	109242467	109243507	+	0	NA	Intergenic	Intergenic	136456	NM_178683	218581	Mm.32318	NM_178683	ENSMUSG00000021697	Depdc1b	9830132O03|AW260467|XTP1	DEP domain containing 1B	protein-coding
common_peak2-20716-75-102-0.0525664645600665-0.327007024258744	chr10	95323387	95324600	+	0	NA	Intergenic	Intergenic	-79304	NM_001001932	216238	Mm.210035	NM_001001932	ENSMUSG00000036499	Eea1	A430109M19Rik|B230358H09Rik|ZFYVE2	early endosome antigen 1	protein-coding
common_peak2-23480-19-18-0.154759813218101-0.351190433797598	chr15	74712047	74712793	+	0	NA	promoter-TSS (NM_025929)	promoter-TSS (NM_025929)	-286	NM_025929	67038	Mm.154566	NM_025929	ENSMUSG00000063522	2010109I03Rik	-	RIKEN cDNA 2010109I03 gene	protein-coding
unique_peak2-34769-5-6--0.511735258063458-0.947717972411649	chr15	59315845	59316132	+	0	NA	intron (NM_026746, intron 4 of 6)	L1MA6|LINE|L1	110235	NM_001164604	68501	Mm.27762	NM_026746	ENSMUSG00000059586	Nsmce2	1110014D18Rik|AI661537	non-SMC element 2 homolog (MMS21, S. cerevisiae)	protein-coding
unique_peak1-5402-10-8-0.186490343566457-1.078512453669	chr5	105585112	105585711	+	0	NA	Intergenic	Intergenic	-16806	NM_001256005	17472	Mm.440525	NM_008620	ENSMUSG00000079363	Gbp4	AW228052|Mag-2|Mpa-2|Mpa2|mKIAA4245	guanylate binding protein 4	protein-coding
common_peak2-25258-25-48--0.752859938770102-1.32967515660734	chr18	66458083	66459401	+	0	NA	Intergenic	Intergenic	-7250	NM_178793	320924	Mm.442049	NM_178793	ENSMUSG00000046318	Ccbe1	4933426F18Rik|9430093N24Rik|mKIAA1983	collagen and calcium binding EGF domains 1	protein-coding
common_peak1-11809-23-17-0.551842503066768-0.713114929964887	chr16	62786860	62787626	+	0	NA	promoter-TSS (NM_178925)	promoter-TSS (NM_178925)	-701	NM_178925	106338	Mm.26321	NM_178925		Nsun3	6720484A09Rik|AU022521	NOL1/NOP2/Sun domain family member 3	protein-coding
unique_peak2-32762-4-11--1.6084230145744-1.68134727924692	chr1	171080054	171080551	+	0	NA	Intergenic	L1MEc|LINE|L1	381293	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
common_peak2-31181-21-25--0.130950452874856-0.305461879681376	chr8	47533493	47534154	+	0	NA	Intergenic	Intergenic	-22573	NM_007981	14081	Mm.210323	NM_007981	ENSMUSG00000018796	Acsl1	Acas|Acas1|Acs|FACS|Facl2	acyl-CoA synthetase long-chain family member 1	protein-coding
common_peak2-29135-26-14-1.02100849654994-1.59386218057211	chr5	125071122	125071871	+	0	NA	intron (NM_026486, intron 13 of 17)	L1MB5|LINE|L1	-8137	NM_011596	21871	Mm.1158	NM_011596		Atp6v0a2	8430408C20Rik|AI385560|ATP6a2|AW489264|Atp6n1d|Atp6n2|C76904|ISF|J6B7|SHIF|Stv1|TJ6M|TJ6s|Tj6|V-ATPase 116 kDa|V-ATPase a2	ATPase, H+ transporting, lysosomal V0 subunit A2	protein-coding
common_peak1-16460-14-7-0.899216160357645-0.947446088118041	chr5	136479631	136480302	+	0	NA	intron (NM_023742, intron 2 of 10)	B3|SINE|B2	9296	NM_001256098	74198	Mm.275574	NM_023742	ENSMUSG00000004947	Dtx2	2610524D08Rik|AA408415|AU022494|Deltex2	deltex 2 homolog (Drosophila)	protein-coding
common_peak1-16159-41-20-1.3088312820699-3.50002372270847	chr5	77357891	77359146	+	0	NA	intron (NM_172146, intron 1 of 10)	intron (NM_172146, intron 1 of 10)	-21918	NM_025939	67054	Mm.182931	NM_025939	ENSMUSG00000029247	Paics	2610511I09Rik|ADE2H1|AIRC|PAIS	phosphoribosylaminoimidazole carboxylase, phosphoribosylaminoribosylaminoimidazole, succinocarboxamide synthetase	protein-coding
common_peak1-7520-33-62--0.645942360974388-1.33955643568472	chr1	23921558	23922406	+	0	NA	intron (NM_028534, intron 1 of 9)	intron (NM_028534, intron 1 of 9)	-5407	NM_001290683	98366	Mm.329963	NM_028534	ENSMUSG00000026155	Smap1	1700056O10Rik|4921514B13Rik|4921525H11Rik|AI462175	small ArfGAP 1	protein-coding
unique_peak1-6298-10-3-1.35641534500877-1.75805390616669	chr7	30307873	30308412	+	0	NA	Intergenic	Intergenic	-17663	NM_001081028	74206	Mm.447042	NM_001081028	ENSMUSG00000030583	Sipa1l3	2610511M17Rik	signal-induced proliferation-associated 1 like 3	protein-coding
unique_peak2-33265-1-9--2.94898510510411-2.31132995230379	chr10	128583555	128583986	+	0	NA	Intergenic	L1Md_A|LINE|L1	-12948	NM_146863	258862	Mm.391449	NM_146863	ENSMUSG00000047868	Olfr770	MOR114-5	olfactory receptor 770	protein-coding
unique_peak2-36130-1-13--3.43441193227435-3.36932189928148	chr2	11705410	11706066	+	0	NA	intron (NM_177268, intron 4 of 6)	intron (NM_177268, intron 4 of 6)	6358	NM_177268	320816	Mm.260201	NM_177268		Ankrd16	2810455F06Rik|AI646698|D430029B21Rik	ankyrin repeat domain 16	protein-coding
common_peak2-20906-6-14--1.34149248522822-1.01572999746118	chr11	4636838	4637550	+	0	NA	intron (NM_026015, intron 5 of 5)	intron (NM_026015, intron 5 of 5)	9587	NM_138948	192650	Mm.207056	NM_138948		Cabp7	-	calcium binding protein 7	protein-coding
common_peak1-11574-15-35--1.15776025088666-1.87578206828671	chr16	13780628	13781231	+	0	NA	exon (NM_001039521, exon 1 of 18)	exon (NM_001039521, exon 1 of 18)	137	NM_001039521	106298	Mm.490362	NM_001039521	ENSMUSG00000022682	Rrn3	AL023001|E130302O19Rik|R75565|TIF-1A|Tif1a	RRN3 RNA polymerase I transcription factor homolog (yeast)	protein-coding
common_peak2-29949-29-26-0.357402578451643-0.590428395010953	chr6	116650107	116651183	+	0	NA	intron (NM_178768, intron 2 of 4)	intron (NM_178768, intron 2 of 4)	16131	NM_178768	319776	Mm.133120	NM_178768	ENSMUSG00000048108	Tmem72	C230095G01Rik	transmembrane protein 72	protein-coding
common_peak1-11461-31-25-0.524798952672032-0.808568985218824	chr15	101385951	101387171	+	0	NA	intron (NM_177717, intron 6 of 8)	MTC|LTR|MaLR	-5471	NM_053249	114566	Mm.458432	NM_053249	ENSMUSG00000049548	Krt82	Krt2-20	keratin 82	protein-coding
common_peak1-9712-9-15--0.81038659359578-0.630231561310125	chr12	29960734	29961243	+	0	NA	Intergenic	Intergenic	-252261	NM_001093775	17933	Mm.253067	NM_008666	ENSMUSG00000061911	Myt1l	2900046C06Rik|2900093J19Rik|C630034G21Rik|Nztf1|Pmng1|Png-1|mKIAA1106	myelin transcription factor 1-like	protein-coding
common_peak2-28189-125-140-0.484274026660757-2.40463348957171	chr4	116074628	116077072	+	0	NA	intron (NM_008641, intron 3 of 28)	PB1D9|SINE|Alu	60936	NM_001042743	17776	Mm.9287	NM_008641	ENSMUSG00000003810	Mast2	MAST205|Mtssk	microtubule associated serine/threonine kinase 2	protein-coding
common_peak2-23589-32-27-0.471737097162056-0.777451270049544	chr15	80158376	80159511	+	0	NA	intron (NM_001044308, intron 4 of 36)	intron (NM_001044308, intron 4 of 36)	41275	NM_001044308	239556	Mm.291058	NM_001044308	ENSMUSG00000022416	Cacna1i	Ca(V)3.3	calcium channel, voltage-dependent, alpha 1I subunit	protein-coding
common_peak1-9977-12-9-0.326847890200276-0.459837087125828	chr13	34078311	34078895	+	0	NA	3' UTR (NM_001163239, exon 6 of 6)	3' UTR (NM_001163239, exon 6 of 6)	16060	NM_001243192	20719	Mm.252210	NM_009254	ENSMUSG00000060147	Serpinb6a	4930482L21Rik|D330015H01Rik|PI-6|Serpinb6|Spi3|ovalbumin	serine (or cysteine) peptidase inhibitor, clade B, member 6a	protein-coding
unique_peak2-37491-2-6--1.72480917832092-1.26211192963361	chr5	5510421	5510768	+	0	NA	intron (NM_022890, intron 3 of 3)	intron (NM_022890, intron 3 of 3)	4195	NM_001193660	64945	Mm.40132	NM_022890	ENSMUSG00000046798	Cldn12	-	claudin 12	protein-coding
unique_peak1-2617-16-0-4.11826364226806-5.41853992195166	chr16	36087251	36087983	+	0	NA	intron (NM_001159421, intron 2 of 3)	intron (NM_001159421, intron 2 of 3)	6256	NM_001159422	381045	Mm.310434	NM_198645	ENSMUSG00000075229	Ccdc58	A930007B11Rik|AI413631	coiled-coil domain containing 58	protein-coding
common_peak1-9759-39-45-0.0921992908621405-0.338002390994162	chr12	54719257	54719749	+	0	NA	intron (NM_013780, intron 3 of 11)	intron (NM_013780, intron 3 of 11)	369839	NM_013780	27386	Mm.247044	NM_013780	ENSMUSG00000021010	Npas3	4930423H22Rik|bHLHe12	neuronal PAS domain protein 3	protein-coding
common_peak2-29407-21-21-0.110057646628938-0.344491671143527	chr6	125353788	125354832	+	0	NA	Intergenic	B1F1|SINE|Alu	-23788	NM_198604	213522	Mm.333396	NM_198604	ENSMUSG00000038167	Plekhg6	BC026778|Gm155	pleckstrin homology domain containing, family G (with RhoGef domain) member 6	protein-coding
unique_peak2-38498-0-5--3.42509343119537-1.32905871926422	chr7	38077573	38077983	+	0	NA	Intergenic	Intergenic	476993	NM_172385	243937	Mm.322505	NM_172385	ENSMUSG00000043456	Zfp536	9630010P11Rik|Znf536|mKIAA0390	zinc finger protein 536	protein-coding
unique_peak1-4666-31-12-1.52479895267203-3.2055306048522	chr3	92284707	92285600	+	0	NA	Intergenic	Intergenic	4650	NM_009264	20753	Mm.331191	NM_009264	ENSMUSG00000050359	Sprr1a	AI528815|SPR1a|mSPRR1A	small proline-rich protein 1A	protein-coding
common_peak2-27587-72-65-0.624189693513864-2.09597429140358	chr3	101516387	101517762	+	0	NA	Intergenic	Intergenic	-108444	NM_144900	11928	Mm.280103	NM_144900	ENSMUSG00000033161	Atp1a1	Atpa-1|BC010319	ATPase, Na+/K+ transporting, alpha 1 polypeptide	protein-coding
common_peak2-30502-23-20-0.32945008173032-0.471456499375596	chr7	64249771	64250585	+	0	NA	intron (NM_008074, intron 3 of 9)	Lx5|LINE|L1	392063	NM_008074	14407	Mm.434343	NM_008074		Gabrg3	B230362M20Rik|Gabrg-3	gamma-aminobutyric acid (GABA) A receptor, subunit gamma 3	protein-coding
common_peak2-26625-29-41--0.28002734216365-0.403996330555226	chr2	118761986	118763091	+	0	NA	Intergenic	Intergenic	10305	NM_028117	72136	Mm.486238	NM_028117	ENSMUSG00000074916	Chst14	2600016L03Rik|D4ST-1|D4st1	carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14	protein-coding
common_peak2-31608-23-37--0.526160008934505-0.720235944639228	chr8	122576126	122576999	+	0	NA	3' UTR (NM_030209, exon 15 of 15)	3' UTR (NM_030209, exon 15 of 15)	48810	NM_133967	102193	Mm.240076	NM_133967	ENSMUSG00000031823	Zdhhc7	AL024087|Gramp2	zinc finger, DHHC domain containing 7	protein-coding
common_peak1-8674-23-30--0.232428805877794-0.363124929330844	chr11	6291372	6292566	+	0	NA	Intergenic	Intergenic	-3159	NM_001005867	52915	Mm.1144	NM_028601	ENSMUSG00000041164	Zmiz2	Zimp7	zinc finger, MIZ-type containing 2	protein-coding
unique_peak1-2122-8-1-2.00522241794757-2.05605744720049	chr15	51716838	51717325	+	0	NA	TTS (NM_030132)	TTS (NM_030132)	8094	NM_030132	78581	Mm.176347	NM_030132	ENSMUSG00000022313	Utp23	1700010I21Rik|AI662478|BB238373|D530033C11Rik	UTP23, small subunit (SSU) processome component, homolog (yeast)	protein-coding
unique_peak1-3901-11-2-1.92373108353046-2.32232533660526	chr2	20937219	20937743	+	0	NA	Intergenic	L1MB3|LINE|L1	46980	NR_033225	433408	Mm.386941	NR_033225		Gm13375	OTTMUSG00000011664	predicted gene 13375	ncRNA
common_peak2-28603-336-490-0.405992133971964-5.25063753894797	chr5	23432297	23435612	+	0	NA	Intergenic	MYSERV6-int|LTR|ERVK	75903	NR_028536	100217436		NR_028536		Snord93	Gm22397|MBII-336	small nucleolar RNA, C/D box 93	snoRNA
common_peak2-32299-9-34--1.93966961054075-3.66464198368355	chrX	38634715	38635324	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-119459	NM_016886	53623	Mm.327681	NM_016886	ENSMUSG00000001986	Gria3	2900064I19Rik|GluA3|GluR-C|GluR-K3|Glur-3|Glur3|Gluralpha3	glutamate receptor, ionotropic, AMPA3 (alpha 3)	protein-coding
common_peak1-15652-18-31--0.687080848771648-0.820293215674341	chr4	135676838	135677503	+	0	NA	Intergenic	B4A|SINE|B4	-22567	NM_008321	15903	Mm.110	NM_008321		Id3	Hlh462|Idb3|bHLHb25	inhibitor of DNA binding 3	protein-coding
common_peak2-25323-45-54-0.0789983118202118-0.332057628060234	chr18	75493897	75495852	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-32145	NM_001042660	17131	Mm.34407	NM_008543	ENSMUSG00000025880	Smad7	Madh7	SMAD family member 7	protein-coding
common_peak2-26613-40-58--0.223667366610743-0.398713855155094	chr2	116975168	116976310	+	0	NA	intron (NM_001277256, intron 1 of 4)	intron (NM_001277256, intron 1 of 4)	28932	NM_033524	114715	Mm.245890	NM_033524	ENSMUSG00000027351	Spred1	5730461F13Rik|AL024345|AW047647	sprouty protein with EVH-1 domain 1, related sequence	protein-coding
unique_peak2-34179-9-14--0.717277189204299-0.53895475198017	chr13	34112660	34113347	+	0	NA	intron (NM_009068, intron 6 of 10)	B4|SINE|B4	-16507	NM_026512	68021	Mm.140243	NM_026512	ENSMUSG00000038286	Bphl	2010012D11Rik|5730533B08Rik|AI115341	biphenyl hydrolase-like (serine hydrolase, breast epithelial mucin-associated antigen)	protein-coding
common_peak1-12206-38-13-1.76409773724093-4.93958276952711	chr17	33780001	33781596	+	0	NA	intron (NM_001002842, intron 4 of 9)	intron (NM_001002842, intron 4 of 9)	5758	NR_028279	378460	Mm.272606	NM_001002842	ENSMUSG00000032739	Pram1	AY665714	PML-RAR alpha-regulated adaptor molecule 1	protein-coding
common_peak2-23133-14-7-0.899216160357645-0.947446088118041	chr14	101798263	101798697	+	0	NA	Intergenic	Intergenic	-199194	NM_029680	76627	Mm.31415	NM_029680	ENSMUSG00000042888	Prr30	1700110M21Rik	proline rich 30	protein-coding
unique_peak1-591-8-3-1.00522241794757-1.39487600375387	chr10	13974306	13974797	+	0	NA	Intergenic	Intergenic	288366	NM_010437	15273	Mm.42157	NM_010437	ENSMUSG00000015501	Hivep2	MIBP1|Schnurri-2|Shn-2	human immunodeficiency virus type I enhancer binding protein 2	protein-coding
common_peak2-31277-9-5-0.604650905683064-1.21398586181642	chr8	71789109	71789450	+	0	NA	Intergenic	Intergenic	-5700	NM_172491	211135	Mm.294970	NM_172491		D130040H23Rik	-	RIKEN cDNA D130040H23 gene	protein-coding
unique_peak2-39064-6-13--1.2419568116773-1.58711810488664	chr8	71670286	71670858	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-5720	NM_199364	211134	Mm.479807	NM_199364	ENSMUSG00000036306	Lzts1	F37|FEZ1	leucine zipper, putative tumor suppressor 1	protein-coding
unique_peak1-958-12-5-1.06381348436648-1.78669045979184	chr11	60125290	60125891	+	0	NA	intron (NM_153080, intron 1 of 14)	intron (NM_153080, intron 1 of 14)	40817	NM_153080	216810	Mm.218875	NM_153080	ENSMUSG00000000538	Tom1l2	2900016I08Rik|A730055F12Rik|AU042072|Srebf1	target of myb1-like 2 (chicken)	protein-coding
common_peak2-26318-3-9--1.73591118484664-1.57096726280955	chr2	32877084	32877505	+	0	NA	intron (NM_178888, intron 14 of 28)	LTR88a|LTR|Gypsy	-39718	NM_019488	56017	Mm.305754	NM_019488	ENSMUSG00000026791	Slc2a8	D2Ertd44e|GLUT8|GlutX1	solute carrier family 2, (facilitated glucose transporter), member 8	protein-coding
common_peak1-11637-24-21-0.333778284130419-0.518921928796332	chr16	21339115	21340124	+	0	NA	Intergenic	Intergenic	-42674	NR_046162	328646	Mm.404748	NR_046162	ENSMUSG00000096918	Gm16863	A830060N17	predicted gene, 16863	ncRNA
unique_peak1-198-15-7-1.01216475055566-1.08658567012551	chr1	82801159	82801945	+	0	NA	Intergenic	B3A|SINE|B2	-34506	NM_010472	15463	Mm.392569	NM_010472	ENSMUSG00000026159	Agfg1	AU045498|C130049H11Rik|C85612|D730048C23Rik|Hrb|RAB|Rip	ArfGAP with FG repeats 1	protein-coding
unique_peak2-32553-1-6--2.43441193227435-1.56314192529759	chr1	74015546	74015978	+	0	NA	intron (NM_001289895, intron 18 of 32)	intron (NM_001289895, intron 18 of 32)	-104722	NR_045311	109198	Mm.359721	NR_045311		6030407O03Rik	-	RIKEN cDNA 6030407O03 gene	ncRNA
unique_peak1-6878-8-2-1.42025991722641-1.65811743852845	chr8	91390443	91390971	+	0	NA	Intergenic	(TCCA)n|Simple_repeat|Simple_repeat	-157927	NR_106190	102465899		NR_106190	miRBase:MI0026042	Mir8110	mmu-mir-8110	microRNA mir-8110	ncRNA
common_peak1-13307-41-22-1.17758674879165-3.01957526180442	chr19	41474196	41475753	+	0	NA	Intergenic	RSINE1|SINE|B4	-15414	NM_031376	83490	Mm.222266	NM_031376	ENSMUSG00000025017	Pik3ap1	1810044J04Rik|BCAP	phosphoinositide-3-kinase adaptor protein 1	protein-coding
unique_peak2-39457-4-6--0.830815435910851-0.989110657569874	chr9	53323570	53323913	+	0	NA	intron (NM_007499, intron 10 of 63)	B3|SINE|B2	21035	NM_007499	11920	Mm.5088	NM_007499	ENSMUSG00000034218	Atm	AI256621|C030026E19Rik	ataxia telangiectasia mutated	protein-coding
common_peak2-29450-28-54--0.728400593703197-1.41268768702114	chr6	21949465	21950269	+	0	NA	intron (NM_001081351, intron 1 of 21)	B3|SINE|B2	13957	NM_001081351	214642	Mm.221404	NM_001081351	ENSMUSG00000062980	Cped1	6720481P07|A430107O13Rik|AI552584	cadherin-like and PC-esterase domain containing 1	protein-coding
common_peak1-9371-25-19-0.539921810457743-0.756750750680359	chr11	97988309	97988982	+	0	NA	intron (NM_028149, intron 2 of 14)	intron (NM_028149, intron 2 of 14)	22285	NM_028149	72194	Mm.218350	NM_028149	ENSMUSG00000020883	Fbxl20	2610511F20Rik|4632423N09Rik|AI849362|AL117906|C86145|Fbl2|Scr|mKIAA4147	F-box and leucine-rich repeat protein 20	protein-coding
unique_peak2-33757-4-5--0.608423014574403-0.909929411522249	chr11	117653986	117654384	+	0	NA	3' UTR (NM_001195088, exon 16 of 16)	3' UTR (NM_001195088, exon 16 of 16)	-4789	NM_029964	77727	Mm.159981	NM_029964	ENSMUSG00000025573	6030468B19Rik	-	RIKEN cDNA 6030468B19 gene	protein-coding
common_peak1-13127-55-27-1.3972649490951-5.2385696980641	chr19	9071093	9072742	+	0	NA	intron (NR_104460, intron 1 of 6)	intron (NR_104460, intron 1 of 6)	8143	NM_001286518	66395	Mm.203866	NM_009643	ENSMUSG00000069833	Ahnak	DY6	AHNAK nucleoprotein (desmoyokin)	protein-coding
common_peak1-10425-8-7-0.00522241794757061-1.00793137938329	chr13	100533073	100533481	+	0	NA	Intergenic	Intergenic	137361	NM_013732	27220	Mm.75498	NM_013732	ENSMUSG00000021647	Cartpt	Cart	CART prepropeptide	protein-coding
unique_peak1-3659-20-1-3.48807478459119-5.43827864561946	chr19	39191424	39192195	+	0	NA	intron (NM_001011707, intron 1 of 8)	L1_Mus1|LINE|L1	3421	NM_001011707	69888	Mm.271190	NM_001011707	ENSMUSG00000067229	Cyp2c66	2010301M18Rik	cytochrome P450, family 2, subfamily c, polypeptide 66	protein-coding
unique_peak1-3335-8-0-3.00522241794757-2.70926996097583	chr18	84914041	84914436	+	0	NA	Intergenic	Intergenic	24604	NM_173770	240479	Mm.472378	NM_173770	ENSMUSG00000047992	Fam69c	B230399E16Rik	family with sequence similarity 69, member C	protein-coding
common_peak2-25509-9-7-0.18961340640422-1.05908390183068	chr19	5510746	5511083	+	0	NA	promoter-TSS (NM_001024560)	promoter-TSS (NM_001024560)	-425	NM_001024560	225861	Mm.20071	NM_001024560	ENSMUSG00000056185	Snx32	B930037P14Rik|Snx6b	sorting nexin 32	protein-coding
unique_peak2-35560-6-7--0.434601889619698-0.97990265578305	chr17	65940054	65940382	+	0	NA	intron (NM_013933, intron 4 of 5)	intron (NM_013933, intron 4 of 5)	22677	NM_013933	30960	Mm.266767	NM_013933	ENSMUSG00000024091	Vapa	33kDa|VAP33	vesicle-associated membrane protein, associated protein A	protein-coding
common_peak1-17246-72-68-0.560059356094149-1.78763620797383	chr6	128838152	128839826	+	0	NA	intron (NM_001289706, intron 2 of 6)	intron (NM_001289706, intron 2 of 6)	1384	NM_020257	93675	Mm.391513	NM_020257	ENSMUSG00000030365	Clec2i	Clr-g|Clrg|Dcl1|LCL-1|OCILrP2	C-type lectin domain family 2, member i	protein-coding
common_peak2-24491-9-9--0.132314688483142-1.03275496310833	chr17	25166797	25167272	+	0	NA	intron (NM_134126, intron 6 of 29)	ID_B1|SINE|B4	14003	NM_134126	106633	Mm.32802	NM_134126	ENSMUSG00000024169	Ift140	AI661311|Tce5|Wdtc2|mKIAA0590	intraflagellar transport 140	protein-coding
unique_peak1-5286-8-2-1.42025991722641-1.65811743852845	chr5	66171230	66171754	+	0	NA	intron (NM_001024917, intron 3 of 19)	intron (NM_001024917, intron 3 of 19)	16732	NM_001024917	333789	Mm.332398	NM_001024917	ENSMUSG00000037795	N4bp2	B3bp|E430014I16|Gm1791|Gm868	NEDD4 binding protein 2	protein-coding
common_peak1-17079-20-14-0.581184188982674-0.690311289528838	chr6	108570820	108571394	+	0	NA	intron (NR_104577, intron 1 of 6)	intron (NR_104577, intron 1 of 6)	2054	NR_040757	75394	Mm.395061	NR_040757	ENSMUSG00000087341	0610040F04Rik	-	RIKEN cDNA 0610040F04 gene	ncRNA
unique_peak2-34534-2-12--2.61789397440441-2.55640854263862	chr14	55578228	55578807	+	0	NA	intron (NM_010856, intron 14 of 38)	intron (NM_010856, intron 14 of 38)	6927	NM_001164171	17888	Mm.290003	NM_010856	ENSMUSG00000040752	Myh6	A830009F23Rik|AA517445|Myhc-a|Myhca|alpha-MHC	myosin, heavy polypeptide 6, cardiac muscle, alpha	protein-coding
common_peak1-14755-24-25-0.0927701846266249-0.337923771396236	chr3	88139238	88140269	+	0	NA	promoter-TSS (NM_178246)	promoter-TSS (NM_178246)	-429	NM_178246	229512	Mm.439830	NM_173188	ENSMUSG00000001415	Smg5	BC024683|mKIAA1089	Smg-5 homolog, nonsense mediated mRNA decay factor (C. elegans)	protein-coding
unique_peak1-3228-9-5-0.604650905683064-1.21398586181642	chr18	60732725	60733191	+	0	NA	TTS (NM_133363)	TTS (NM_133363)	12518	NM_025776	66810	Mm.275106	NM_025776	ENSMUSG00000024604	Rbm22	8430430L24Rik	RNA binding motif protein 22	protein-coding
common_peak2-21604-6-7--0.434601889619698-0.97990265578305	chr11	99199633	99199995	+	0	NA	promoter-TSS (NM_001033397)	promoter-TSS (NM_001033397)	-535	NM_001033397	320864	Mm.440509	NM_001033397	ENSMUSG00000075570	Krt26	4732407F15Rik|Krt25b	keratin 26	protein-coding
common_peak1-14522-20-24--0.155781405183531-0.319918318021793	chr3	27862476	27863493	+	0	NA	intron (NM_001164056, intron 2 of 26)	intron (NM_001164056, intron 2 of 26)	-20109	NM_008875	18805	Mm.212039	NM_008875	ENSMUSG00000027695	Pld1	AA536939|C85393|Pld1a|Pld1b	phospholipase D1	protein-coding
common_peak2-31466-18-24--0.330937038546373-0.380101753845076	chr8	105860454	105861211	+	0	NA	Intergenic	Intergenic	10602	NR_036588	69794	Mm.396139	NR_036588		1600027J07Rik	-	RIKEN cDNA 1600027J07 gene	ncRNA
common_peak2-31901-20-30--0.466121525795682-0.569352520859861	chr9	57708473	57709127	+	0	NA	Intergenic	Intergenic	-26759	NM_019689	56380	Mm.425588	NM_019689	ENSMUSG00000004661	Arid3b	Bdp|Dri2	AT rich interactive domain 3B (BRIGHT-like)	protein-coding
common_peak1-9455-66-49-0.874627474651117-3.19445253706502	chr11	103311618	103313387	+	0	NA	Intergenic	Intergenic	-38524	NM_183034	353047	Mm.383308	NM_183034	ENSMUSG00000034247	Plekhm1	AP162|B2|BC038943|D330036J23Rik	pleckstrin homology domain containing, family M (with RUN domain) member 1	protein-coding
unique_peak1-6323-9-2-1.60465090568306-1.87199725847353	chr7	45671646	45672172	+	0	NA	Intergenic	Intergenic	847995	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak2-21996-37-80--0.813856931398806-2.31817998122055	chr12	54862061	54863088	+	0	NA	intron (NM_013780, intron 4 of 11)	intron (NM_013780, intron 4 of 11)	442287	NM_028133	112407	Mm.133037	NM_028133	ENSMUSG00000035105	Egln3	2610021G09Rik|AI505553|AI648162|Hif-p4h-3|Phd3|SM-20	egl-9 family hypoxia-inducible factor 3	protein-coding
common_peak1-11519-100-81-0.879219770192706-4.95958206545815	chr16	58520970	58524129	+	0	NA	intron (NM_018784, intron 1 of 10)	intron (NM_018784, intron 1 of 10)	876	NM_018784	54613	Mm.212742	NM_018784	ENSMUSG00000022747	St3gal6	1700023B24Rik|AI930218|AW552396|Siat10|St3galVI	ST3 beta-galactoside alpha-2,3-sialyltransferase 6	protein-coding
common_peak2-27945-7-16--1.28837201095215-1.08658567012551	chr4	32409775	32410318	+	0	NA	Intergenic	Lx7|LINE|L1	-94364	NM_001109661	12014	Mm.491223	NM_007521	ENSMUSG00000040270	Bach2	E030004N02Rik	BTB and CNC homology 2	protein-coding
common_peak2-28908-19-23--0.18227517405947-0.320777457303847	chr5	92219873	92220913	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-24067	NR_045383	73452	Mm.396233	NR_045383		1700063O14Rik	-	RIKEN cDNA 1700063O14 gene	ncRNA
unique_peak2-38392-7-7--0.200909169701811-0.97990265578305	chr7	19269152	19269678	+	0	NA	intron (NM_054058, intron 2 of 5)	intron (NM_054058, intron 2 of 5)	1926	NM_054058	434540	Mm.479863	NM_054058		Psg20	Cea7|EG434540	pregnancy-specific glycoprotein 20	protein-coding
common_peak2-29430-35-41-0.0390528356837434-0.311371317671728	chr6	8777544	8778738	+	0	NA	Intergenic	Intergenic	-49657	NM_010492	15893	Mm.275683	NM_010492	ENSMUSG00000062995	Ica1	69kDa|ICA69	islet cell autoantigen 1	protein-coding
common_peak1-8178-25-51--0.838589812795986-1.63185160949148	chr10	42761573	42762626	+	0	NA	intron (NM_175407, intron 5 of 6)	intron (NM_175407, intron 5 of 6)	132237	NM_175407	109205	Mm.153750	NM_175407	ENSMUSG00000038248	Sobp	2900009C16Rik|5330439J01Rik|JXC1|jc	sine oculis-binding protein homolog (Drosophila)	protein-coding
unique_peak1-5878-8-3-1.00522241794757-1.39487600375387	chr6	86499111	86499639	+	0	NA	intron (NR_037960, intron 3 of 4)	intron (NR_037960, intron 3 of 4)	21980	NR_037961	72012	Mm.349174	NR_037960	ENSMUSG00000097048	1600020E01Rik	-	RIKEN cDNA 1600020E01 gene	ncRNA
common_peak2-27776-65-92--0.0469928716309038-0.3058025585553	chr3	133310013	133311183	+	0	NA	Intergenic	Intergenic	-103244	NM_001040400	214133	Mm.347816	NM_145989	ENSMUSG00000040943	Tet2	Ayu17-449|E130014J05Rik|mKIAA1546	tet methylcytosine dioxygenase 2	protein-coding
common_peak2-20149-10-5-0.771452844287613-1.33892459842472	chr1	168584610	168584999	+	0	NA	Intergenic	Intergenic	-6980	NM_001164312	226604	Mm.330032	NM_001164312	ENSMUSG00000051081	Gm4847	EG226604|Fmo12	predicted gene 4847	protein-coding
common_peak1-16396-16-25--0.58217607587303-0.633951497070961	chr5	124425075	124425919	+	0	NA	intron (NM_145070, intron 1 of 31)	RSINE1|SINE|B4	1860	NM_145070	29816	Mm.149954	NM_145070	ENSMUSG00000000915	Hip1r	AA410023|mKIAA0655	huntingtin interacting protein 1 related	protein-coding
common_peak1-12216-9-17--0.980311595038092-0.844317084070804	chr17	34204421	34205047	+	0	NA	Intergenic	Intergenic	-24590	NM_008206	15001	Mm.116	NM_008206	ENSMUSG00000024334	H2-Oa	H-2Oa	histocompatibility 2, O region alpha locus	protein-coding
common_peak2-29629-11-18--0.739233929191972-0.671582559449692	chr6	56704259	56704753	+	0	NA	intron (NM_030235, intron 15 of 15)	intron (NM_030235, intron 15 of 15)	39607	NM_030235	78937	Mm.105343	NM_030235	ENSMUSG00000029787	Avl9	5830411G16Rik|D730049P16Rik|mKIAA0241	AVL9 homolog (S. cerevisiase)	protein-coding
common_peak2-29708-42-61--0.211866982519691-0.393610822453566	chr6	83136567	83137799	+	0	NA	intron (NM_001198866, intron 6 of 31)	intron (NM_001198866, intron 6 of 31)	7600	NM_007835	13191	Mm.6919	NM_007835	ENSMUSG00000031865	Dctn1	AL022633|Glued|p150|p150<glued>	dynactin 1	protein-coding
common_peak2-28586-14-15--0.100783839642355-0.301029995663982	chr5	16000477	16001049	+	0	NA	Intergenic	(GGA)n|Simple_repeat|Simple_repeat	-58550	NM_001289460	15234	Mm.267078	NM_010427	ENSMUSG00000028864	Hgf	C230052L06Rik|HGF/SF|NK1|NK2|SF|SF/HGF	hepatocyte growth factor	protein-coding
common_peak2-32121-9-10--0.269818212233077-1.05503135781948	chr9	103008540	103008950	+	0	NA	Intergenic	MTE-int|LTR|MaLR	-5659	NM_173781	270192	Mm.490252	NM_173781	ENSMUSG00000032549	Rab6b	9630015C03|AI844641|C330006L04Rik|D9Bwg0185e	RAB6B, member RAS oncogene family	protein-coding
common_peak1-17564-8-10--0.454209200689727-1.078512453669	chr7	34267981	34268469	+	0	NA	Intergenic	L1_Mus3|LINE|L1	109972	NM_001270543	545948	Mm.349644	NM_001270543		Scgb1b20	EG545948|Gm5895	secretoglobin, family 1B, member 20	protein-coding
common_peak2-21878-51-122--0.867590679736667-3.8273293106879	chr12	86882536	86884771	+	0	NA	Intergenic	PB1D10|SINE|Alu	-56402	NM_001205052	81703	Mm.103560	NM_030887	ENSMUSG00000034271	Jdp2	Jundm2|Jundp2|TIF	Jun dimerization protein 2	protein-coding
unique_peak1-46-7-1-1.79909083029819-1.80617997398389	chr1	23203396	23203745	+	0	NA	Intergenic	Intergenic	-75538	NR_029533	387225		NR_029533	miRBase:MI0000144	Mir30a	Mirn30a|mmu-mir-30a	microRNA 30a	ncRNA
unique_peak2-32813-5-8--0.874305337448166-1.10484139239135	chr1	184675510	184675945	+	0	NA	Intergenic	Intergenic	3584	NM_001033547	433386	Mm.338103	NM_001033547	ENSMUSG00000043429	Ccdc185	4922505E12Rik	coiled-coil domain containing 185	protein-coding
unique_peak1-7110-9-2-1.60465090568306-1.87199725847353	chr9	43306089	43306615	+	0	NA	Intergenic	Intergenic	187506	NM_023655	72169	Mm.273277	NM_023655	ENSMUSG00000032013	Trim29	1110047J21Rik|2810431N19Rik|4732461M22Rik|AI119726	tripartite motif-containing 29	protein-coding
unique_peak2-33986-4-9--1.34538860874061-1.36011389749466	chr12	85903883	85904384	+	0	NA	Intergenic	Intergenic	-6669	NM_007701	12677	Mm.4405	NM_007701	ENSMUSG00000021239	Vsx2	Chx10|Hox-10|Hox10|or	visual system homeobox 2	protein-coding
unique_peak2-33736-7-13--1.00826409175941-0.697979855752659	chr11	116104084	116104705	+	0	NA	Intergenic	Intergenic	-4989	NM_025276	14027	Mm.293683	NM_025276	ENSMUSG00000034282	Evpl	-	envoplakin	protein-coding
common_peak1-9638-13-12-0.0780323124966764-0.334470287753051	chr12	54492726	54493407	+	0	NA	intron (NM_013780, intron 2 of 11)	intron (NM_013780, intron 2 of 11)	143402	NM_013780	27386	Mm.247044	NM_013780	ENSMUSG00000021010	Npas3	4930423H22Rik|bHLHe12	neuronal PAS domain protein 3	protein-coding
common_peak1-11195-59-94--0.24449160745837-0.545897237751466	chr15	77820994	77823168	+	0	NA	Intergenic	Intergenic	-20827	NM_018749	55944	Mm.3955	NM_018749	ENSMUSG00000016554	Eif3d	66/67kDa|AA407891|Eif3s7|eIF3p66	eukaryotic translation initiation factor 3, subunit D	protein-coding
common_peak1-9810-30-33-0.082212568241534-0.329362479200675	chr12	69502312	69503393	+	0	NA	Intergenic	LTR40b|LTR|ERVL	-732594	NR_033146	100316870	Mm.379794	NR_033146		Gm17821	-	DDB1 and CUL4 associated factor 5 pseudogene	pseudo
unique_peak1-6856-11-2-1.92373108353046-2.32232533660526	chr8	85491876	85492513	+	0	NA	intron (NM_177378, intron 1 of 6)	intron (NM_177378, intron 1 of 6)	104939	NM_177378	330812	Mm.491438	NM_177378	ENSMUSG00000047747	Rnf150	A630007N06Rik|C030044C12Rik|Greul5|mKIAA1214	ring finger protein 150	protein-coding
unique_peak1-73-7-0-2.79909083029819-2.40823996531185	chr1	36899746	36900123	+	0	NA	intron (NM_018872, intron 5 of 40)	intron (NM_018872, intron 5 of 40)	64105	NM_001289612	22637	Mm.8038	NM_009539	ENSMUSG00000026117	Zap70	Srk|ZAP-70|mrtle|mur	zeta-chain (TCR) associated protein kinase	protein-coding
unique_peak1-5901-9-2-1.60465090568306-1.87199725847353	chr6	87576465	87576989	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	-36032	NM_021381	58182	Mm.333226	NM_021381	ENSMUSG00000049409	Prokr1	EG-VEGFR1|Gpr73|Pkr1	prokineticin receptor 1	protein-coding
common_peak2-26983-108-117-0.487533912046228-2.08383684644226	chr2	167776892	167778767	+	0	NA	intron (NM_011201, intron 1 of 8)	intron (NM_011201, intron 1 of 8)	20002	NM_011201	19246	Mm.277916	NM_011201	ENSMUSG00000027540	Ptpn1	PTP-1B|PTP-HA2|PTP1B	protein tyrosine phosphatase, non-receptor type 1	protein-coding
common_peak1-11352-12-10-0.189344366450341-0.386243247519795	chr15	89110092	89110810	+	0	NA	exon (NM_026813, exon 18 of 25)	exon (NM_026813, exon 18 of 25)	25712	NR_105924	102465981		NR_105924		Mir6959	mmu-mir-6959	microRNA mir-6959	ncRNA
common_peak1-18853-10-15--0.643584654991231-0.519648556297791	chr9	20644786	20645351	+	0	NA	Intergenic	MTC|LTR|MaLR	22120	NM_001030290	235033	Mm.297661	NM_001030290	ENSMUSG00000053773	Rdh8	Gm182|prRDH	retinol dehydrogenase 8	protein-coding
common_peak2-22746-55-77--0.0807823477095466-0.313973398029927	chr13	111685995	111687191	+	0	NA	Intergenic	Intergenic	333046	NR_045908	73129	Mm.417826	NR_045908		3110015C05Rik	-	RIKEN cDNA 3110015C05 gene	ncRNA
common_peak2-27510-20-20-0.0957573618124323-0.321718508207528	chr3	95230775	95231835	+	0	NA	promoter-TSS (NR_033637)	promoter-TSS (NR_033637)	34	NR_033637	100043305	Mm.412052	NR_033637		Gm4349	-	SET domain, bifurcated 1 pseudogene	pseudo
unique_peak1-5171-20-5-1.90311228387004-2.81016724606745	chr5	28630495	28631543	+	0	NA	Intergenic	Intergenic	-12710	NM_028234	381626	Mm.304075	NM_028234	ENSMUSG00000048271	Rbm33	3200001K10Rik|6430512A10Rik|AA386890|Prr8	RNA binding motif protein 33	protein-coding
common_peak2-25090-9-5-0.604650905683064-1.21398586181642	chr18	36399648	36399939	+	0	NA	Intergenic	MERVL_2A-int|LTR|ERVL	-41023	NM_008989	19290	Mm.231802	NM_008989		Pura	CAGER-1|Pur-alpha|ssCRE-BP	purine rich element binding protein A	protein-coding
common_peak2-21487-18-30--0.641277159158523-0.738267116931589	chr11	88556976	88557907	+	0	NA	intron (NM_001201341, intron 5 of 7)	intron (NM_001201341, intron 5 of 7)	22102	NM_054043	76626	Mm.400451	NM_054043	ENSMUSG00000069769	Msi2	1700105C15Rik|AI451722|AI563628|AW489193|Msi2h	musashi RNA-binding protein 2	protein-coding
unique_peak2-34599-5-5--0.289342836727009-0.909929411522249	chr14	70349537	70349829	+	0	NA	intron (NM_028560, intron 3 of 6)	B4A|SINE|B4	109469	NM_028526	73523	Mm.23509	NM_028526	ENSMUSG00000022085	Pebp4	PEBP-4	phosphatidylethanolamine binding protein 4	protein-coding
common_peak1-15173-28-46--0.501629731856175-0.767679714496325	chr3	152165118	152166200	+	0	NA	intron (NM_001081277, intron 9 of 13)	intron (NM_001081277, intron 9 of 13)	106011	NM_001287139	108946	Mm.379292	NM_198416	ENSMUSG00000039068	Zzz3	3110065C23Rik|6430567E01Rik|AA408566|AI481057|AW556059|R75514	zinc finger, ZZ domain containing 3	protein-coding
common_peak2-26526-9-7-0.18961340640422-1.05908390183068	chr2	91184113	91184536	+	0	NA	intron (NM_175123, intron 3 of 8)	intron (NM_175123, intron 3 of 8)	79052	NM_023854	77038	Mm.43636	NM_023854	ENSMUSG00000027255	Arfgap2	2310032E02Rik|Zfp289	ADP-ribosylation factor GTPase activating protein 2	protein-coding
unique_peak1-6628-9-2-1.60465090568306-1.87199725847353	chr8	10582785	10583243	+	0	NA	intron (NM_001081397, intron 33 of 35)	PB1D9|SINE|Alu	299440	NR_040705	320014	Mm.403203	NR_040705		B930025P03Rik	-	RIKEN cDNA B930025P03 gene	ncRNA
common_peak2-20447-30-60--0.761061928071014-1.61783625824855	chr10	39731484	39732939	+	0	NA	intron (NM_144821, intron 1 of 3)	intron (NM_144821, intron 1 of 3)	12863	NM_144821	215929	Mm.55513	NM_144821	ENSMUSG00000038522	AI317395	AI482555|Naglt1a	expressed sequence AI317395	protein-coding
common_peak2-29133-12-11-0.0638134843664826-0.337263207250336	chr5	124530916	124531408	+	0	NA	intron (NM_019875, intron 5 of 11)	intron (NM_019875, intron 5 of 11)	14645	NM_019875	56325	Mm.254839	NM_019875	ENSMUSG00000029408	Abcb9	TAPL|mKIAA1520	ATP-binding cassette, sub-family B (MDR/TAP), member 9	protein-coding
unique_peak2-35387-2-9--2.23938235115068-1.87199725847353	chr17	29716481	29717026	+	0	NA	intron (NR_045447, intron 3 of 3)	intron (NR_045447, intron 3 of 3)	-15730	NR_106127	102465769		NR_106127		Mir7667	mmu-mir-7667	microRNA mir-7667	ncRNA
unique_peak2-33079-2-8--2.08737925770563-1.65811743852845	chr10	80032832	80033231	+	0	NA	intron (NM_078477, intron 1 of 1)	intron (NM_078477, intron 1 of 1)	7010	NM_078477	118445	Mm.41513	NM_078477	ENSMUSG00000035397	Klf16	AI843742|BTEB4|DRRF	Kruppel-like factor 16	protein-coding
common_peak2-20436-13-34--1.3508109863072-2.16696607243888	chr10	34018806	34019837	+	0	NA	3' UTR (NM_030203, exon 1 of 1)	3' UTR (NM_030203, exon 1 of 1)	2094	NM_030203	72480	Mm.21485	NM_030203	ENSMUSG00000039485	Tspyl4	2610102M01Rik|B230210I21Rik|D10Bwg0791e	TSPY-like 4	protein-coding
unique_peak2-32514-1-7--2.62705701021674-1.80617997398389	chr1	54713576	54714007	+	0	NA	intron (NM_001081433, intron 23 of 27)	MTA_Mm|LTR|MaLR	-99263	NM_001163314	241062	Mm.103539	NM_175508	ENSMUSG00000073678	Pgap1	5033403E17Rik|9030223K07Rik|A530084K22|D230012E17Rik|oto	post-GPI attachment to proteins 1	protein-coding
unique_peak2-38594-3-7--1.41398308995928-1.23214870625617	chr7	75587131	75587515	+	0	NA	Intergenic	Intergenic	25013	NR_046208	71244	Mm.410787	NR_046208		4933436H12Rik	-	RIKEN cDNA 4933436H12 gene	ncRNA
unique_peak2-37495-5-13--1.51173525806346-1.78669045979184	chr5	5687965	5688455	+	0	NA	intron (NM_028734, intron 1 of 5)	B4A|SINE|B4	5879	NM_001285471	74051	Mm.274956	NM_028734	ENSMUSG00000015653	Steap2	4921538B17Rik|AI930049|AW045895|IPCA-1|IPCA1|PCANAP1|STAMP1|STMP	six transmembrane epithelial antigen of prostate 2	protein-coding
common_peak1-15404-14-18--0.348711353085941-0.360333814299795	chr4	83379611	83380228	+	0	NA	intron (NM_001081012, intron 21 of 25)	Lx5|LINE|L1	208470	NM_001081012	320226	Mm.180032	NM_029117	ENSMUSG00000052407	Ccdc171	4930418J05Rik|4930473A06Rik|A330015D16Rik	coiled-coil domain containing 171	protein-coding
common_peak1-10404-24-30--0.160986407619158-0.316008636696545	chr13	98014915	98016127	+	0	NA	exon (NM_007930, exon 2 of 3)	exon (NM_007930, exon 2 of 3)	4461	NM_007930	13803	Mm.241073	NM_007930	ENSMUSG00000041773	Enc1	Nrpb|PIG10	ectodermal-neural cortex 1	protein-coding
common_peak2-29211-52-72--0.0815645686143185-0.314891503798722	chr5	137102450	137103905	+	0	NA	Intergenic	Intergenic	-59817	NM_001291238	13047	Mm.320317	NM_009986	ENSMUSG00000029705	Cux1	CDP|Cutl1|Cux|Cux-1	cut-like homeobox 1	protein-coding
common_peak2-23781-10-10--0.103016273628528-0.301029995663987	chr15	99344004	99344483	+	0	NA	intron (NM_001038658, intron 7 of 11)	intron (NM_001038658, intron 7 of 11)	14353	NM_028224	72393	Mm.39760	NM_028224	ENSMUSG00000023011	Faim2	2900002L20Rik|Lfg|Lfg2|NMP25|Nmp35|Tmbim2	Fas apoptotic inhibitory molecule 2	protein-coding
common_peak1-15938-29-37--0.135637432828474-0.313095283157754	chr5	28071171	28072121	+	0	NA	intron (NM_018878, intron 17 of 20)	intron (NM_018878, intron 17 of 20)	46444	NM_018878	55982	Mm.277190	NM_018878	ENSMUSG00000002221	Paxip1	D5Ertd149e|PTIP	PAX interacting (with transcription-activation domain) protein 1	protein-coding
unique_peak2-37951-3-5--0.998945590680433-0.96108193396963	chr5	151064428	151064838	+	0	NA	intron (NM_172887, intron 1 of 60)	intron (NM_172887, intron 1 of 60)	2128	NM_172887	320365	Mm.216590	NM_172887	ENSMUSG00000056602	Fry	13CDNA73|9330186A19Rik|AF346502|AI462658|C87180|D930046M03|cg003|mKIAA4143	furry homolog (Drosophila)	protein-coding
unique_peak1-4727-9-5-0.604650905683064-1.21398586181642	chr3	106492555	106493038	+	0	NA	intron (NM_001039478, intron 1 of 2)	L1_Mus4|LINE|L1	4891	NM_001039478	321000	Mm.259638	NM_028081	ENSMUSG00000056260	Lrif1	2010012G17Rik|4933421E11Rik|AI450568	ligand dependent nuclear receptor interacting factor 1	protein-coding
unique_peak2-32670-2-6--1.72480917832092-1.26211192963361	chr1	135819813	135820104	+	0	NA	Intergenic	RMER13B|LTR|ERVK	-1980	NM_054077	116847	Mm.214514	NM_054077	ENSMUSG00000041577	Prelp	7330409J17Rik|SLRR2A	proline arginine-rich end leucine-rich repeat	protein-coding
unique_peak2-37012-6-4-0.24347001549294-0.989110657569874	chr3	122923820	122924184	+	0	NA	intron (NM_080451, intron 1 of 4)	(CA)n|Simple_repeat|Simple_repeat	15065	NM_080451	118449	Mm.34359	NM_080451	ENSMUSG00000050315	Synpo2	1110069I04Rik|2310068J10Rik|9530006G20Rik|AI848603|Myo	synaptopodin 2	protein-coding
common_peak2-24557-7-5-0.214128329577033-1.01466476204226	chr17	28621306	28621717	+	0	NA	intron (NM_010220, intron 1 of 10)	intron (NM_010220, intron 1 of 10)	1583	NM_010220	14229	Mm.276405	NM_010220	ENSMUSG00000024222	Fkbp5	D17Ertd592e|Dit1|FKBP-5|FKBP51	FK506 binding protein 5	protein-coding
common_peak2-27122-20-16-0.400611943340854-0.507611860039817	chr3	18624553	18625153	+	0	NA	Intergenic	Lx5|LINE|L1	-244376	NR_040544	73959	Mm.60616	NR_040544		4930433B08Rik	-	RIKEN cDNA 4930433B08 gene	ncRNA
unique_peak1-1419-11-8-0.338768582809301-1.14218153353838	chr12	80229411	80230024	+	0	NA	Intergenic	MERVL-int|LTR|ERVL	-2058	NM_009705	11847	Mm.3506	NM_009705	ENSMUSG00000021125	Arg2	AII|AU022422	arginase type II	protein-coding
common_peak2-22265-57-59-0.35914244447041-0.819872392783464	chr13	5845144	5846373	+	0	NA	Intergenic	Intergenic	11580	NR_045891	71867	Mm.179181	NR_045891		1700016G22Rik	-	RIKEN cDNA 1700016G22 gene	ncRNA
common_peak2-28518-35-51--0.269069459678588-0.449053920623485	chr5	91962357	91963562	+	0	NA	intron (NM_145562, intron 1 of 3)	intron (NM_145562, intron 1 of 3)	16233	NM_145562	231440	Mm.5002	NM_145562		Parm1	2210012L08Rik|9130213B05Rik|W91666	prostate androgen-regulated mucin-like protein 1	protein-coding
common_peak2-21867-42-58--0.140313721494658-0.332057628060234	chr12	54738410	54739152	+	0	NA	intron (NM_013780, intron 3 of 11)	intron (NM_013780, intron 3 of 11)	389117	NM_013780	27386	Mm.247044	NM_013780	ENSMUSG00000021010	Npas3	4930423H22Rik|bHLHe12	neuronal PAS domain protein 3	protein-coding
unique_peak2-32798-5-6--0.511735258063458-0.947717972411649	chr1	182506464	182506863	+	0	NA	intron (NM_007415, intron 2 of 22)	intron (NM_007415, intron 2 of 22)	7557	NM_007415	11545	Mm.277779	NM_007415	ENSMUSG00000026496	Parp1	5830444G22Rik|AI893648|ARTD1|Adprp|Adprt1|C80510|PARP|PPOL|parp-1|sPARP-1	poly (ADP-ribose) polymerase family, member 1	protein-coding
common_peak1-14470-25-29--0.0450406902634128-0.301029995663982	chr3	98024605	98025512	+	0	NA	Intergenic	Intergenic	-1021	NM_026328	67709	Mm.46306	NM_026328	ENSMUSG00000027876	Reg4	2010002L15Rik|GISP|RELP	regenerating islet-derived family, member 4	protein-coding
unique_peak2-34200-3-7--1.41398308995928-1.23214870625617	chr13	41249280	41249646	+	0	NA	Intergenic	Intergenic	-44106	NM_008104	107889	Mm.1399	NM_008104	ENSMUSG00000021362	Gcm2	Gcm-rs1|Gcm1|Gcm1-rs2	glial cells missing homolog 2 (Drosophila)	protein-coding
common_peak1-9823-15-18--0.235762762887929-0.326591483156968	chr12	71136243	71137102	+	0	NA	intron (NM_001081453, intron 19 of 28)	L1MC4a|LINE|L1	-48683	NM_022028	64010	Mm.390480	NM_022028	ENSMUSG00000021067	Sav1	1700040G09Rik|Salv|Sav|WW45|Wwp3|Wwp4	salvador homolog 1 (Drosophila)	protein-coding
common_peak2-23496-61-72-0.192924770869323-0.470687517451348	chr15	76117320	76119372	+	0	NA	intron (NM_028852, intron 4 of 4)	intron (NM_028852, intron 4 of 4)	-6518	NM_001195537	100503915	Mm.393455	NM_001195537	ENSMUSG00000071724	Smpd5	ENSMUSG00000071724|Gm10345|MA-nSMase	sphingomyelin phosphodiesterase 5	protein-coding
common_peak1-18575-22-26--0.107603397076064-0.30528805757448	chr8	105860510	105861387	+	0	NA	Intergenic	Intergenic	10486	NR_036588	69794	Mm.396139	NR_036588		1600027J07Rik	-	RIKEN cDNA 1600027J07 gene	ncRNA
common_peak1-9951-26-37--0.320028421285123-0.460129356264038	chr12	111165903	111167015	+	0	NA	Intergenic	Intergenic	180371	NR_037233	100499517		NR_037233	miRBase:MI0014035	Mir3072	mmu-mir-3072	microRNA 3072	ncRNA
common_peak1-18697-8-5-0.420259917226415-1.10484139239135	chr8	121618509	121619023	+	0	NA	intron (NM_019707, intron 6 of 13)	intron (NM_019707, intron 6 of 13)	-249672	NM_024219	68196	Mm.358714	NM_024219	ENSMUSG00000031839	Hsbp1	0610007A03Rik|AA408769|Hsp25	heat shock factor binding protein 1	protein-coding
unique_peak1-3131-9-0-3.18961340640422-3.01029995663981	chr18	36344510	36345152	+	0	NA	intron (NM_001167891, intron 1 of 9)	RLTR15|LTR|ERVK	11983	NM_001167891	100042150	Mm.380390	NM_001167891	ENSMUSG00000060275	Nrg2	Don1|NTAK	neuregulin 2	protein-coding
unique_peak1-2727-8-0-3.00522241794757-2.70926996097583	chr16	94323640	94324066	+	0	NA	intron (NM_011377, intron 7 of 10)	intron (NM_011377, intron 7 of 10)	185610	NM_139145	110948	Mm.30921	NM_139145	ENSMUSG00000040820	Hlcs	410I21.SP6|D16Jhu34	holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase)	protein-coding
unique_peak1-6381-8-2-1.42025991722641-1.65811743852845	chr7	73532499	73533016	+	0	NA	intron (NM_146191, intron 1 of 33)	CpG	470	NM_146191	233328	Mm.33284	NM_146191	ENSMUSG00000015133	Lrrk1	AW319595|C230002E15Rik|D130026O16Rik|mKIAA1790	leucine-rich repeat kinase 1	protein-coding
unique_peak2-33407-4-6--0.830815435910851-0.989110657569874	chr11	55097251	55097694	+	0	NA	exon (NM_001029988, exon 9 of 23)	exon (NM_001029988, exon 9 of 23)	28287	NM_001029988	245827	Mm.339363	NM_001029988	ENSMUSG00000055333	Fat2	EMI2|Fath2|Gm523|mKIAA0811	FAT tumor suppressor homolog 2 (Drosophila)	protein-coding
unique_peak1-2968-14-5-1.31425365963649-1.4372489031793	chr17	72827129	72827759	+	0	NA	intron (NM_007439, intron 1 of 28)	intron (NM_007439, intron 1 of 28)	126203	NM_007439	11682	Mm.311854	NM_007439	ENSMUSG00000055471	Alk	CD246|Tcrz	anaplastic lymphoma kinase	protein-coding
unique_peak2-34759-7-27--2.00826409175941-3.02827458119512	chr15	57891796	57892589	+	0	NA	intron (NM_009572, intron 2 of 3)	intron (NM_009572, intron 2 of 3)	15871	NM_001042438	22770	Mm.244931	NM_009572	ENSMUSG00000022361	Zhx1	-	zinc fingers and homeoboxes 1	protein-coding
common_peak2-21580-13-20--0.613845392140992-0.532159081577619	chr11	97800356	97801117	+	0	NA	intron (NM_028199, intron 8 of 13)	intron (NM_028199, intron 8 of 13)	47024	NM_028199	72324	Mm.39617	NM_028199	ENSMUSG00000017417	Plxdc1	2410003I07Rik|AI848450|Tem7	plexin domain containing 1	protein-coding
unique_peak1-5761-18-0-4.31291915122835-NA	chr6	51462799	51463416	+	0	NA	Intergenic	ORR1A4|LTR|MaLR	-10795	NM_001127349	71982	Mm.294166	NM_028035	ENSMUSG00000038301	Snx10	2410004M09Rik	sorting nexin 10	protein-coding
common_peak2-23527-164-179-0.60390933951095-4.65947927782172	chr15	77798108	77801777	+	0	NA	intron (NM_018749, intron 1 of 14)	intron (NM_018749, intron 1 of 14)	1312	NM_018749	55944	Mm.3955	NM_018749	ENSMUSG00000016554	Eif3d	66/67kDa|AA407891|Eif3s7|eIF3p66	eukaryotic translation initiation factor 3, subunit D	protein-coding
common_peak1-14574-29-40--0.245261924002973-0.373466121463214	chr3	38277204	38278247	+	0	NA	Intergenic	Intergenic	106013	NM_001167883	99696	Mm.290937	NM_001033198	ENSMUSG00000044864	Ankrd50	AI662170|E430012K20Rik|mKIAA1223|mKIAA3019	ankyrin repeat domain 50	protein-coding
unique_peak1-6919-14-3-1.89921616035764-2.80787975886178	chr8	106519032	106519574	+	0	NA	Intergenic	Lx9|LINE|L1	-106222	NM_009868	12562	Mm.21767	NM_009868	ENSMUSG00000031871	Cdh5	7B4|AA408225|Cd144|VE-Cad|VECD|VEcad|Vec	cadherin 5	protein-coding
common_peak2-28843-24-34--0.33607311417725-0.427313034957882	chr5	72167467	72168239	+	0	NA	intron (NM_008069, intron 3 of 8)	intron (NM_008069, intron 3 of 8)	76598	NM_008069	14400	Mm.38567	NM_008069		Gabrb1	AW061132|B230208N19Rik|Gabrb-1	gamma-aminobutyric acid (GABA) A receptor, subunit beta 1	protein-coding
common_peak1-14526-13-11-0.193509529916613-0.379391706698377	chr3	28781255	28782011	+	0	NA	Intergenic	IAPLTR3-int|LTR|ERVK	-9906	NM_001033479	385263	Mm.60893	NM_001033479	ENSMUSG00000074655	Gm1527	Gm1136	predicted gene 1527	protein-coding
common_peak2-30407-12-8-0.478850983645327-0.562038191119709	chr7	35127394	35127951	+	0	NA	Intergenic	Intergenic	46887	NM_025948	67070	Mm.276503	NM_025948	ENSMUSG00000066568	Lsm14a	2700023B17Rik|AA407828|AU017544|Tral	LSM14 homolog A (SCD6, S. cerevisiae)	protein-coding
common_peak2-21518-18-13-0.505564229170747-0.625923329873571	chr11	94370127	94370863	+	0	NA	intron (NM_170671, intron 10 of 18)	intron (NM_170671, intron 10 of 18)	-9207	NM_027984	71889	Mm.248620	NM_027984	ENSMUSG00000010080	Epn3	2310022G12Rik	epsin 3	protein-coding
common_peak2-29327-17-30--0.735899972181837-0.841847921495509	chr5	146948188	146949233	+	0	NA	Intergenic	L1VL4|LINE|L1	48170	NM_001008547	69282	Mm.373573	NM_001008547	ENSMUSG00000095040	1700001J03Rik	-	RIKEN cDNA 1700001J03 gene	protein-coding
common_peak1-13402-49-60-0.0755464854622971-0.329053855867857	chr19	47537390	47539387	+	0	NA	intron (NM_001164717, intron 1 of 13)	intron (NM_001164717, intron 1 of 13)	513	NM_001164717	14218	Mm.127560	NM_008018	ENSMUSG00000053617	Sh3pxd2a	2310014D11Rik|AA589508|AI256723|AI413738|C230050L11|EG329070|Fish|Gm5098|Sh3md1|TSK5|Tks5	SH3 and PX domains 2A	protein-coding
unique_peak1-5672-13-5-1.19350952991661-1.95509489018123	chr6	31108885	31109585	+	0	NA	intron (NR_110471, intron 2 of 3)	intron (NR_110471, intron 2 of 3)	59239	NR_110470	232685	Mm.443019	NM_144555		Lincpint	MNCb-1768|Pint|linc-Pint	long intergenic non-protein coding RNA, Trp53 induced transcript	ncRNA
common_peak1-18779-11-12--0.191746133889479-0.310474156842889	chr8	127317976	127318527	+	0	NA	exon (NM_198632, exon 1 of 10)	exon (NM_198632, exon 1 of 10)	1332	NM_198632	330863	Mm.422769	NM_198632	ENSMUSG00000036913	Trim67	D130049O21Rik|TNL	tripartite motif-containing 67	protein-coding
common_peak2-24724-38-33-0.483989818048191-0.907712525274296	chr17	47293425	47294275	+	0	NA	intron (NM_001097623, intron 3 of 19)	MIRb|SINE|MIR	15959	NM_001097623	224829	Mm.260989	NM_172622	ENSMUSG00000064043	Trerf1	9430096I18Rik|AI429294|B830015H24|RAPA|Trep-132|Trep132	transcriptional regulating factor 1	protein-coding
unique_peak2-38237-5-6--0.511735258063458-0.947717972411649	chr6	118419012	118419368	+	0	NA	intron (NM_011763, intron 2 of 5)	intron (NM_011763, intron 2 of 5)	10101	NM_011763	22750	Mm.106970	NM_011763	ENSMUSG00000072623	Zfp9	1810048F22Rik|AU016736|Krox-4|Zfp-9|mszf79-2	zinc finger protein 9	protein-coding
common_peak1-15100-24-9-1.47128180788035-2.52428350728854	chr3	132799036	132800066	+	0	NA	Intergenic	B4A|SINE|B4	44634	NM_027927	71793	Mm.246726	NM_027927	ENSMUSG00000028016	Ints12	1110020M19Rik|2810027J24Rik|4930529N21Rik|A230056J18Rik|AI666778|Phf22	integrator complex subunit 12	protein-coding
common_peak1-12060-24-34--0.33607311417725-0.427313034957882	chr17	23676003	23676809	+	0	NA	Intergenic	Intergenic	24787	NM_001033496	449521	Mm.268582	NM_001033496	ENSMUSG00000071256	Zfp213	BC038178|D17Ertd197e	zinc finger protein 213	protein-coding
unique_peak2-39517-9-10--0.269818212233077-1.05503135781948	chr9	64281598	64282016	+	0	NA	intron (NM_172522, intron 1 of 22)	ID_B1|SINE|B4	48374	NM_001134399	214058	Mm.127721	NM_172522	ENSMUSG00000036466	Megf11	2410080H04Rik|D130061K05	multiple EGF-like-domains 11	protein-coding
unique_peak2-36563-4-4--0.345388608740609-0.864171920961574	chr2	169589944	169590314	+	0	NA	intron (NM_080455, intron 1 of 1)	B4|SINE|B4	130983	NM_080455	228911	Mm.315789	NM_080455	ENSMUSG00000047907	Tshz2	2900073F20Rik|B830045G17|Mtsh2|Sdccag33l|Tsh2|Zfp218|mKIAA4248|teashirt2	teashirt zinc finger family member 2	protein-coding
unique_peak2-35006-4-5--0.608423014574403-0.909929411522249	chr15	99916837	99917211	+	0	NA	intron (NM_001159361, intron 1 of 37)	intron (NM_001159361, intron 1 of 37)	47929	NM_001159361	239667	Mm.243658	NM_172819	ENSMUSG00000023026	Dip2b	4932422C22|AI317237|AI854602|mKIAA1463	DIP2 disco-interacting protein 2 homolog B (Drosophila)	protein-coding
common_peak1-12197-29-27-0.304935158557507-0.525808162491371	chr17	32787492	32788495	+	0	NA	Intergenic	Intergenic	-8435	NM_001101588	631304	Mm.328950	NM_001101588	ENSMUSG00000090700	Cyp4f40	EG631304	cytochrome P450, family 4, subfamily f, polypeptide 40	protein-coding
common_peak1-16506-25-36--0.347603460283844-0.465043498729215	chr5	139483682	139484644	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-13256	NM_008808	18590	Mm.2675	NM_008808	ENSMUSG00000025856	Pdgfa	-	platelet derived growth factor, alpha	protein-coding
common_peak2-27245-49-39-0.684355728137821-1.63192341342353	chr3	52400779	52402199	+	0	NA	Intergenic	Intergenic	-142157	NR_038079	329639	Mm.131245	NR_038079		Gm2447	100039832|A530017F20	predicted gene 2447	ncRNA
common_peak2-27727-22-23-0.0623216043662485-0.319130838712456	chr3	123267293	123268188	+	0	NA	intron (NR_121616, intron 6 of 13)	intron (NR_121616, intron 6 of 13)	54628	NM_001293682	83398	Mm.443908	NM_031186	ENSMUSG00000027977	Ndst3	4921531K01Rik|4930511P15Rik|N-HSST 3|NDST-3	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	protein-coding
common_peak1-10320-41-50-0.028723362877165-0.309546119484978	chr13	70637326	70638276	+	0	NA	Intergenic	Intergenic	-74318	NR_045934	73584	Mm.442491	NR_045934		1700100L14Rik	-	RIKEN cDNA 1700100L14 gene	ncRNA
common_peak1-16814-17-23--0.366666162516118-0.383878263347744	chr6	47835583	47836396	+	0	NA	intron (NM_146175, intron 2 of 7)	MLT1F1|LTR|MaLR	8435	NM_146175	101095	Mm.440186	NM_146175	ENSMUSG00000025821	Zfp282	AI449432|C81429|E430019K09Rik|HUB1	zinc finger protein 282	protein-coding
common_peak1-19513-27-27-0.184191028837632-0.393151991482004	chrX	167232364	167233548	+	0	NA	Intergenic	Intergenic	-816107	NR_029457	654820	Mm.34441	NM_001039559	ENSMUSG00000072844	G530011O06Rik	-	RIKEN cDNA G530011O06 gene	ncRNA
unique_peak2-32467-0-7--3.84013093047421-1.80617997398389	chr1	21014736	21015128	+	0	NA	intron (NM_177409, intron 2 of 10)	intron (NM_177409, intron 2 of 10)	54374	NM_177409	170829	Mm.185680	NM_177409		Tram2	C330003D03Rik	translocating chain-associating membrane protein 2	protein-coding
common_peak1-9069-15-38--1.27323746830659-2.30508312501225	chr11	69097169	69097791	+	0	NA	Intergenic	Lx3_Mus|LINE|L1	39895	NM_172560	216846	Mm.28774	NM_172560	ENSMUSG00000032782	Cntrob	9830165K03Rik|Lip8	centrobin, centrosomal BRCA2 interacting protein	protein-coding
common_peak1-8651-16-17--0.0516613591742505-0.301029995663984	chr10	127289704	127290457	+	0	NA	intron (NM_147222, intron 1 of 3)	Lx7|LINE|L1	3096	NM_147222	216453	Mm.222953	NM_147222	ENSMUSG00000054052	Rdh19	RDH-S|RDH-S2|Rdhs	retinol dehydrogenase 19	protein-coding
common_peak1-8488-7-10--0.660340788339108-1.12966497611638	chr10	80750706	80751162	+	0	NA	intron (NM_001282095, intron 1 of 20)	intron (NM_001282095, intron 1 of 20)	-2408	NM_001282096	27375	Mm.27984	NM_013769	ENSMUSG00000034917	Tjp3	-	tight junction protein 3	protein-coding
common_peak2-21410-3-6--1.22133801201688-1.08602067057793	chr11	83606256	83606627	+	0	NA	Intergenic	Intergenic	39302	NM_145432	217026	Mm.117874	NM_145432	ENSMUSG00000000976	Heatr6	2700008B19Rik|BB135312|BB249351	HEAT repeat containing 6	protein-coding
unique_peak1-5685-35-4-3.10944216357514-8.50822402412644	chr6	32396618	32397808	+	0	NA	intron (NM_175750, intron 3 of 31)	intron (NM_175750, intron 3 of 31)	-63928	NR_040277	319849	Mm.440860	NR_040277	ENSMUSG00000086763	Plxna4os1	B230378P21Rik	plexin A4, opposite strand 1	ncRNA
common_peak2-25492-17-16-0.130833496954699-0.356936432242225	chr19	5106539	5107171	+	0	NA	TTS (NR_045528)	TTS (NR_045528)	141	NM_029576	76308	Mm.182563	NM_029576	ENSMUSG00000024870	Rab1b	1110011F09Rik	RAB1B, member RAS oncogene family	protein-coding
common_peak2-30416-16-14-0.211373046659543-0.364171515310935	chr7	39449428	39449909	+	0	NA	Intergenic	Intergenic	-136456	NM_001013810	434171	Mm.60990	NM_001013810	ENSMUSG00000060565	Gm5591	EG434171	predicted gene 5591	protein-coding
common_peak2-24871-20-22--0.03548717146582-0.301029995663994	chr17	80206581	80207294	+	0	NA	Intergenic	Intergenic	88526	NM_178050	56298	Mm.175403	NM_019717	ENSMUSG00000059811	Atl2	2010110I21Rik|AA407293|AV334690|Aip-2|Arl6ip2	atlastin GTPase 2	protein-coding
unique_peak1-4813-18-2-2.7279566505072-4.01305082679061	chr3	142339475	142340506	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	-24022	NM_173763	229905	Mm.289643	NM_173763	ENSMUSG00000040213	Ccbl2	KATIII|Kat3	cysteine conjugate-beta lyase 2	protein-coding
unique_peak2-33747-5-6--0.511735258063458-0.947717972411649	chr11	117095828	117096287	+	0	NA	intron (NM_001113486, intron 2 of 11)	intron (NM_001113486, intron 2 of 11)	-31503	NM_001113487	53860	Mm.38450	NM_017380	ENSMUSG00000059248	Sept9	MSF1|Msf|PNUTL4|Sint1	septin 9	protein-coding
common_peak2-22145-13-13--0.0288828914198356-0.309074325783021	chr12	86142247	86143068	+	0	NA	intron (NM_013589, intron 16 of 34)	intron (NM_013589, intron 16 of 34)	28437	NM_028863	74316	Mm.25719	NM_028863	ENSMUSG00000021241	Isca2	0710001C05Rik|5730594E03Rik|Hbld1	iron-sulfur cluster assembly 2 homolog (S. cerevisiae)	protein-coding
common_peak1-12424-11-5-0.923731083530457-1.477227296591	chr17	75144001	75144604	+	0	NA	intron (NM_152817, intron 7 of 19)	MTB_Mm|LTR|MaLR	27212	NM_152817	74196	Mm.209503	NM_152817	ENSMUSG00000024078	Ttc27	2610511O17Rik	tetratricopeptide repeat domain 27	protein-coding
unique_peak1-3738-17-8-1.04837133676273-1.30305656033811	chr19	46980788	46981637	+	0	NA	intron (NM_029810, intron 3 of 17)	intron (NM_029810, intron 3 of 17)	55629	NM_029810	76952	Mm.40965	NM_029810	ENSMUSG00000025041	Nt5c2	2010002I23Rik|CnII|ENSMUSG00000025039|Gm9751|Gmp|Nt5b|Pnt5|cN-II	5'-nucleotidase, cytosolic II	protein-coding
common_peak2-19536-81-95-0.287087102287409-0.797674886274166	chr1	88276417	88277860	+	0	NA	Intergenic	B2_Mm2|SINE|B2	7578	NM_010341	14767	Mm.389159	NM_010341	ENSMUSG00000026237	Nmur1	FM-3|Gpr66|NMU-R1|NMU1R|NmU-R	neuromedin U receptor 1	protein-coding
common_peak1-16687-99-124-0.253573458620564-0.798859123350393	chr6	13607033	13608494	+	0	NA	intron (NM_175312, intron 2 of 4)	Lx7|LINE|L1	20203	NM_175312	101148	Mm.354863	NM_175312	ENSMUSG00000042742	B630005N14Rik	AI666701	RIKEN cDNA B630005N14 gene	protein-coding
common_peak2-27748-19-34--0.72659569028328-0.974620203848502	chr3	127257088	127257994	+	0	NA	intron (NM_197997, intron 1 of 25)	B1_Mur2|SINE|Alu	1134	NM_197997	71643	Mm.274884	NM_197997	ENSMUSG00000051278	Zgrf1	4930422G04Rik|AI448607	zinc finger, GRF-type containing 1	protein-coding
common_peak1-13369-14-28--0.958764834769927-1.16796998271031	chr19	46075923	46076592	+	0	NA	Intergenic	Intergenic	-1711	NM_176785	20170	Mm.101110	NM_176785	ENSMUSG00000074811	Hps6	5330434M19Rik|BLOC2|ru	Hermansky-Pudlak syndrome 6	protein-coding
unique_peak2-39969-4-6--0.830815435910851-0.989110657569874	chrX	144151618	144152053	+	0	NA	Intergenic	(CAA)n|Simple_repeat|Simple_repeat	-163211	NM_001081173	210297	Mm.30506	NM_001081173	ENSMUSG00000031290	Lrch2	AI316885|mKIAA1495	leucine-rich repeats and calponin homology (CH) domain containing 2	protein-coding
unique_peak2-35934-7-8--0.370834171144123-1.00793137938329	chr19	8735976	8736496	+	0	NA	intron (NR_045314, intron 1 of 2)	(TTTC)n|Simple_repeat|Simple_repeat	1589	NR_045314	402757	Mm.150255	NR_045314		9830166K06Rik	-	RIKEN cDNA 9830166K06 gene	ncRNA
common_peak1-19329-20-33--0.599388056659146-0.781990829058356	chrX	11664576	11665444	+	0	NA	intron (NM_001168321, intron 1 of 13)	CpG	-7331	NM_029510	71458	Mm.196328	NM_029510	ENSMUSG00000040363	Bcor	5830466J11Rik|8430401K06Rik|BcorR|D930024N20Rik|mKIAA1575	BCL6 interacting corepressor	protein-coding
unique_peak1-1340-15-1-3.01216475055566-4.18809100057339	chr12	12420827	12421532	+	0	NA	Intergenic	Lx8|LINE|L1	-21898	NR_045829	70858	Mm.410838	NR_045829		4921511I17Rik	-	RIKEN cDNA 4921511I17 gene	ncRNA
common_peak1-14758-34-89--1.10978456932841-4.04560048484949	chr3	88177620	88178417	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-4376	NM_031368	12095	Mm.482191	NM_031368	ENSMUSG00000074489	Bglap3	AI461847|Bglap-rs1|ORG|mOC-X	bone gamma-carboxyglutamate protein 3	protein-coding
unique_peak1-1096-9-1-2.18961340640422-2.31132995230379	chr11	88873116	88873677	+	0	NA	intron (NM_009546, intron 4 of 8)	B1_Mur2|SINE|Alu	12679	NM_009546	217069	Mm.248445	NM_009546	ENSMUSG00000000275	Trim25	AA960166|AL022677|EFP|Zfp147	tripartite motif-containing 25	protein-coding
common_peak2-30640-14-34--1.23006685658732-1.94354392707378	chr7	98308606	98309582	+	0	NA	intron (NM_011807, intron 1 of 22)	B4A|SINE|B4	69798	NM_011807	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
common_peak1-13527-10-10--0.103016273628528-0.301029995663987	chr2	153435934	153436467	+	0	NA	Intergenic	(TTTTG)n|Simple_repeat|Simple_repeat	22317	NM_001195390	99311	Mm.294478	NM_133850	ENSMUSG00000056941	Commd7	2310010I22Rik|AW060956|mU3	COMM domain containing 7	protein-coding
unique_peak1-2502-14-7-0.899216160357645-0.947446088118041	chr16	13505257	13505953	+	0	NA	Intergenic	Intergenic	14907	NR_037997	70100	Mm.158330	NR_037997		2310015D24Rik	-	RIKEN cDNA 2310015D24 gene	ncRNA
common_peak1-7870-15-18--0.235762762887929-0.326591483156968	chr1	133609661	133610302	+	0	NA	TTS (NM_145509)	TTS (NM_145509)	24709	NM_145509	226421	Mm.44508	NM_145509	ENSMUSG00000052688	5430435G22Rik	Rab7b	RIKEN cDNA 5430435G22 gene	protein-coding
common_peak2-19724-10-9-0.0344872501214071-1.05503135781948	chr1	71918644	71919074	+	0	NA	Intergenic	Intergenic	-15827	NR_027658	667931	Mm.214128	NR_027658		Gm8883	EG667931|Gm554	predicted gene 8883	ncRNA
common_peak1-17253-37-48--0.0887167726293896-0.31027100108714	chr6	131387516	131388722	+	0	NA	Intergenic	Intergenic	-49651	NM_011733	56449	Mm.458000	NM_011733	ENSMUSG00000030189	Ybx3	Csda|Dpba|MSY3|MSY4|Yb2|dbpA|oxyR	Y box protein 3	protein-coding
common_peak2-20855-36-40-0.121769081549671-0.36493371439645	chr11	80428665	80429456	+	0	NA	intron (NM_177390, intron 16 of 21)	intron (NM_177390, intron 16 of 21)	138512	NM_009871	12569	Mm.142275	NM_009871	ENSMUSG00000048895	Cdk5r1	Cdk5r|D11Bwg0379e|p25|p35	cyclin-dependent kinase 5, regulatory subunit 1 (p35)	protein-coding
common_peak2-24952-8-8--0.164702583494742-1.00793137938329	chr18	64045036	64045347	+	0	NA	intron (NM_001014981, intron 21 of 27)	Lx8|LINE|L1	176842	NM_001014981	104082	Mm.30850	NM_001014981	ENSMUSG00000040560	Wdr7	AI462727|TRAG|mKIAA0541	WD repeat domain 7	protein-coding
common_peak2-27538-9-8-0.0196884049619079-1.03275496310833	chr3	96103880	96104323	+	0	NA	Intergenic	Intergenic	-6209	NM_010186	14129	Mm.150	NM_010186	ENSMUSG00000015947	Fcgr1	AI323638|AV092959|CD64|FcgammaRI|IGGHAFC	Fc receptor, IgG, high affinity I	protein-coding
unique_peak1-6830-8-2-1.42025991722641-1.65811743852845	chr8	79447583	79448149	+	0	NA	intron (NM_001083906, intron 2 of 8)	intron (NM_001083906, intron 2 of 8)	21459	NM_001083906	110784	Mm.324393	NM_001083906	ENSMUSG00000031618	Nr3c2	MR|Mlr	nuclear receptor subfamily 3, group C, member 2	protein-coding
common_peak2-20530-25-57--0.996131089782466-2.3171515282213	chr10	62650445	62651904	+	0	NA	intron (NM_182992, intron 2 of 19)	intron (NM_182992, intron 2 of 19)	15526	NM_182992	68802	Mm.259767	NM_182992	ENSMUSG00000020067	Mypn	1110056A04Rik|9830112J03|AI853556|mKIAA4170	myopalladin	protein-coding
common_peak1-14281-8-5-0.420259917226415-1.10484139239135	chr2	157170780	157171199	+	0	NA	intron (NM_010285, intron 1 of 4)	RSINE1|SINE|B4	1402	NM_010285	14601	Mm.389327	NM_010285	ENSMUSG00000027643	Ghrh	Ghrf	growth hormone releasing hormone	protein-coding
unique_peak2-37437-4-15--2.02346051385325-2.4322161449009	chr4	154160189	154160726	+	0	NA	Intergenic	Intergenic	-69852	NM_172878	242800	Mm.72944	NM_172878	ENSMUSG00000046637	Ttc34	4932418L02|B230396O12Rik	tetratricopeptide repeat domain 34	protein-coding
unique_peak2-33728-3-5--0.998945590680433-0.96108193396963	chr11	115813219	115813638	+	0	NA	intron (NM_020483, intron 4 of 10)	intron (NM_020483, intron 4 of 10)	18455	NM_020483	57230	Mm.267810	NM_020483		Sap30bp	2700016D05Rik|Hcngp	SAP30 binding protein	protein-coding
unique_peak1-4078-17-3-2.21829633820504-3.11807310444576	chr2	70458906	70459548	+	0	NA	Intergenic	Intergenic	-40339	NR_027343	70231	Mm.271950	NM_027352	ENSMUSG00000014959	Gorasp2	0610011A07Rik|2410043M02Rik|5730520M13Rik|9430094F20Rik|AW552058|GOLPH2|GRASP55|GRS2|p59	golgi reassembly stacking protein 2	protein-coding
common_peak1-10921-16-24--0.525592547506663-0.561823156887258	chr15	8098596	8099312	+	0	NA	intron (NM_133227, intron 28 of 34)	intron (NM_133227, intron 28 of 34)	-20152	NM_001162906	73692	Mm.164436	NM_001162906	ENSMUSG00000039801	2410089E03Rik	4732468D17Rik|b2b012Clo	RIKEN cDNA 2410089E03 gene	protein-coding
common_peak1-13336-85-53-1.20051574596118-6.66298113110788	chr19	43916717	43918811	+	0	NA	Intergenic	MLT1D|LTR|MaLR	4471	NR_033472	100038628	Mm.212585	NR_033472	ENSMUSG00000074828	Gm10768	ENSMUSG00000074828	predicted gene 10768	ncRNA
unique_peak1-1455-14-6-1.09186123830004-1.16633110333236	chr12	105980836	105981593	+	0	NA	intron (NM_148948, intron 1 of 26)	MER34A|LTR|ERV1	8948	NM_148948	192119	Mm.21135	NM_148948	ENSMUSG00000041415	Dicer1	1110006F08Rik|D12Ertd7e|mKIAA0928	dicer 1, ribonuclease type III	protein-coding
common_peak2-27751-22-60--1.28345323247548-3.52554618120705	chr3	127789362	127790629	+	0	NA	Intergenic	Intergenic	144528	NR_045704	402774	Mm.209170	NR_045704		D030025E07Rik	-	RIKEN cDNA D030025E07 gene	ncRNA
common_peak1-8347-36-54--0.302038627356906-0.47894145157142	chr10	53379116	53380158	+	0	NA	intron (NM_001081428, intron 9 of 17)	intron (NM_001081428, intron 9 of 17)	-29392	NM_027830	71567	Mm.278221	NM_027830	ENSMUSG00000058298	Mcm9	9030408O17Rik|Gm235|Mcmdc1	minichromosome maintenance complex component 9	protein-coding
unique_peak1-2982-8-0-3.00522241794757-2.70926996097583	chr17	78110557	78111075	+	0	NA	Intergenic	Intergenic	-488772	NM_015800	50766	Mm.311912	NM_015800	ENSMUSG00000024074	Crim1	AU015004	cysteine rich transmembrane BMP regulator 1 (chordin like)	protein-coding
common_peak1-11606-11-19--0.813234510635749-0.769930178837768	chr16	17927686	17928192	+	0	NA	intron (NM_153150, intron 1 of 8)	CpG-5571	373	NM_153150	13358	Mm.229291	NM_153150	ENSMUSG00000003528	Slc25a1	1300019P08Rik|2610100G11Rik|AI194714|Ctp|Dgsj|Slc20a3	solute carrier family 25 (mitochondrial carrier, citrate transporter), member 1	protein-coding
common_peak2-30399-10-11--0.228547155712387-0.31137425193576	chr7	34268059	34268603	+	0	NA	Intergenic	L1_Mus3|LINE|L1	110078	NM_001270543	545948	Mm.349644	NM_001270543		Scgb1b20	EG545948|Gm5895	secretoglobin, family 1B, member 20	protein-coding
common_peak1-12757-12-6-0.841421063030034-1.58711810488664	chr18	60595742	60596359	+	0	NA	Intergenic	Intergenic	60367	NM_001146275	60440	Mm.261140	NM_021792	ENSMUSG00000054072	Iigp1	2900074L10Rik|AI046432|AW111922|Ifgga1|Iigp|Irga6	interferon inducible GTPase 1	protein-coding
common_peak1-12535-35-27-0.6240153364049-1.10223211335955	chr18	3280619	3281762	+	0	NA	intron (NM_013498, intron 4 of 6)	intron (NM_013498, intron 4 of 6)	555	NM_001110854	12916	Mm.5244	NM_013498	ENSMUSG00000063889	Crem	ICER|ICERI	cAMP responsive element modulator	protein-coding
unique_peak2-38515-1-10--3.08648862885404-2.57096726280955	chr7	45015746	45016123	+	0	NA	Intergenic	Intergenic	1503970	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak1-342-12-3-1.64877598508764-2.36932189928148	chr1	135018916	135019464	+	0	NA	Intergenic	B1_Mur4|SINE|Alu	-8553	NM_133819	108954	Mm.293628	NM_133819	ENSMUSG00000046062	Ppp1r15b	1810033K10Rik|AI606441|C530022L24Rik|CReP	protein phosphatase 1, regulatory (inhibitor) subunit 15b	protein-coding
common_peak1-18227-17-27--0.589058583852566-0.604689589251113	chr8	26015173	26015935	+	0	NA	intron (NM_001293693, intron 9 of 19)	MTC|LTR|MaLR	43722	NM_001293693	353188	Mm.269223	NM_153397	ENSMUSG00000037437	Adam32	-	a disintegrin and metallopeptidase domain 32	protein-coding
common_peak2-26967-33-22-0.807775606468516-1.45230360914611	chr2	166995616	166996318	+	0	NA	intron (NM_008420, intron 1 of 1)	B1_Mur3|SINE|Alu	18351	NM_008420	16500	Mm.205341	NM_008420		Kcnb1	Kcr1-1|Kv2.1|Shab	potassium voltage gated channel, Shab-related subfamily, member 1	protein-coding
unique_peak2-39202-3-7--1.41398308995928-1.23214870625617	chr8	105757486	105757907	+	0	NA	Intergenic	Intergenic	113738	NR_036588	69794	Mm.396139	NR_036588		1600027J07Rik	-	RIKEN cDNA 1600027J07 gene	ncRNA
common_peak2-24825-35-64--0.59099755456595-1.20183724428356	chr17	71526569	71527735	+	0	NA	Intergenic	Intergenic	-6166	NM_022882	64898	Mm.227924	NM_022882	ENSMUSG00000024052	Lpin2	2610511G02Rik|AI481352|AW742896	lipin 2	protein-coding
common_peak1-17907-15-34--1.11711826638931-1.74023246399357	chr7	123369271	123369950	+	0	NA	Intergenic	Intergenic	-36255	NM_172743	233765	Mm.3741	NM_172743	ENSMUSG00000045659	Plekha7	A430081P20Rik|AI414265	pleckstrin homology domain containing, family A member 7	protein-coding
unique_peak1-4498-10-2-1.77145284428761-2.09384600808989	chr3	9703329	9703797	+	0	NA	intron (NM_001195031, intron 5 of 8)	intron (NM_001195031, intron 5 of 8)	-93478	NM_133218	170753	Mm.212908	NM_133218	ENSMUSG00000040209	Zfp704	C030026M03|C030034L19Rik|Gig1|Znf704	zinc finger protein 704	protein-coding
common_peak1-14817-9-10--0.269818212233077-1.05503135781948	chr3	90541442	90541989	+	0	NA	intron (NM_001165968, intron 6 of 7)	intron (NM_001165968, intron 6 of 7)	10887	NM_207263	384997	Mm.316644	NM_207263	ENSMUSG00000042250	Pglyrp4	Gm1478|Gm413	peptidoglycan recognition protein 4	protein-coding
common_peak1-19445-13-10-0.319040412000471-0.446472590016315	chrX	98890551	98891296	+	0	NA	Intergenic	Intergenic	38563	NM_009910	12766	Mm.12876	NM_009910	ENSMUSG00000050232	Cxcr3	Cd183|Cmkar3	chemokine (C-X-C motif) receptor 3	protein-coding
common_peak2-24714-13-17--0.391452970804544-0.364171515310935	chr17	46556419	46557159	+	0	NA	3' UTR (NM_207671, exon 10 of 10)	3' UTR (NM_207671, exon 10 of 10)	-9102	NM_053250	114570	Mm.25168	NM_053250	ENSMUSG00000023968	Crip3	TLP|TLP-A|TLP-B|Tlmp	cysteine-rich protein 3	protein-coding
common_peak2-32153-11-23--1.07626891646954-1.24082643394777	chr9	108479874	108480576	+	0	NA	TTS (NM_028944)	TTS (NM_028944)	776	NM_031392	83669	Mm.335454	NM_031392	ENSMUSG00000066357	Wdr6	mWDR6	WD repeat domain 6	protein-coding
unique_peak2-37958-4-15--2.02346051385325-2.4322161449009	chr5	151650604	151651179	+	0	NA	Intergenic	Intergenic	-104291	NM_013823	16591	Mm.6500	NM_013823	ENSMUSG00000058488	Kl	alpha-kl	klotho	protein-coding
common_peak2-31235-24-51--0.907229815373375-1.77636329975052	chr8	70042134	70043038	+	0	NA	Intergenic	MLT1F-int|LTR|MaLR	-5167	NM_008674	17962	Mm.57193	NM_008674	ENSMUSG00000056426	Nat3	-	N-acetyltransferase 3	protein-coding
common_peak1-7815-15-25--0.688274967585436-0.73354163167379	chr1	125560076	125560689	+	0	NA	intron (NM_199021, intron 4 of 25)	B4A|SINE|B4	381754	NM_199021	269109	Mm.483255	NM_199021	ENSMUSG00000036815	Dpp10	6430601K09Rik|DPP X|Dprp3	dipeptidylpeptidase 10	protein-coding
common_peak2-31941-11-6-0.701338662194009-1.32595962126035	chr9	64114305	64114709	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-13095	NM_008927	26395	Mm.248907	NM_008927	ENSMUSG00000004936	Map2k1	MAPKK1|MEKK1|Mek1|Prkmk1	mitogen-activated protein kinase kinase 1	protein-coding
unique_peak2-34241-9-15--0.81038659359578-0.630231561310125	chr13	54503955	54504707	+	0	NA	Intergenic	Intergenic	31618	NM_009946	12890	Mm.268902	NM_009946	ENSMUSG00000025867	Cplx2	921-L|AI413745|AW492120	complexin 2	protein-coding
common_peak1-11126-55-67-0.117157029902363-0.376523540924376	chr15	65786732	65787982	+	0	NA	intron (NM_001145096, intron 6 of 16)	L1Md_F3|LINE|L1	21009	NM_001145096	654498	Mm.364550	NM_001145096	ENSMUSG00000072511	Hhla1	F930104E18Rik	HERV-H LTR-associating 1	protein-coding
common_peak1-16658-49-45-0.482721866968171-1.0238927023692	chr6	115538588	115540597	+	0	NA	intron (NM_001101431, intron 1 of 3)	intron (NM_001101431, intron 1 of 3)	3002	NM_001101431	70291	Mm.133694	NM_001101431		Mkrn2os	2510049J12Rik	makorin, ring finger protein 2, opposite strand	protein-coding
common_peak1-18964-20-11-0.903112283870037-1.11267835143409	chr9	54642916	54643601	+	0	NA	Intergenic	Intergenic	30703	NM_013496	12903	Mm.34797	NM_013496	ENSMUSG00000032291	Crabp1	AI326249|CRABP-I|Crabp-1|CrabpI|Rbp-5	cellular retinoic acid binding protein I	protein-coding
common_peak2-25794-159-144-0.861999997419154-8.07955724124874	chr19	36833640	36835184	+	0	NA	Intergenic	Intergenic	-23318	NM_016854	53412	Mm.24724	NM_016854	ENSMUSG00000067279	Ppp1r3c	PTG|Ppp1r5	protein phosphatase 1, regulatory (inhibitor) subunit 3C	protein-coding
unique_peak1-5020-22-6-1.8399291830298-3.01815507148775	chr4	129250957	129251909	+	0	NA	promoter-TSS (NM_001162433)	promoter-TSS (NM_001162433)	-548	NM_001162433	16818	Mm.293753	NM_010693	ENSMUSG00000000409	Lck	Hck-3|Lsk|Lskt|p56<lck>|p56Lck	lymphocyte protein tyrosine kinase	protein-coding
unique_peak1-7337-14-5-1.31425365963649-1.4372489031793	chrX	48233945	48234620	+	0	NA	intron (NM_133729, intron 4 of 11)	MIR3|SINE|MIR	39669	NM_133729	70415	Mm.391246	NM_133729		2610018G03Rik	Mst4	RIKEN cDNA 2610018G03 gene	protein-coding
common_peak2-30581-22-28--0.210696890040167-0.337923771396236	chr7	80339315	80340250	+	0	NA	Intergenic	RMER19C|LTR|ERVK	-92828	NR_046024	625243	Mm.261798	NR_046024		Gm6567	-	predicted gene 6567	ncRNA
unique_peak2-38858-5-7--0.704380336005853-1.01466476204226	chr7	144774501	144774885	+	0	NA	Intergenic	Intergenic	145336	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
unique_peak2-33518-7-12--0.901348887842903-1.31827279259406	chr11	75620975	75621530	+	0	NA	Intergenic	Intergenic	-11693	NM_007873	13447	Mm.5137	NM_007873	ENSMUSG00000020848	Doc2b	-	double C2, beta	protein-coding
unique_peak2-33283-13-20--0.613845392140992-0.532159081577619	chr11	53706487	53707433	+	0	NA	Intergenic	MTEa|LTR|MaLR	-1755	NM_011396	20520	Mm.42253	NM_011396	ENSMUSG00000018900	Slc22a5	Lstpl|Octn2|jvs	solute carrier family 22 (organic cation transporter), member 5	protein-coding
unique_peak2-39530-4-5--0.608423014574403-0.909929411522249	chr9	66349886	66350319	+	0	NA	intron (NM_145617, intron 76 of 77)	intron (NM_145617, intron 76 of 77)	12298	NM_175206	74165	Mm.297998	NM_175206	ENSMUSG00000050503	Fbxl22	1110004B15Rik	F-box and leucine-rich repeat protein 22	protein-coding
common_peak1-9405-40-52--0.0689447718121006-0.303138254425616	chr11	100849868	100851046	+	0	NA	Intergenic	B3A|SINE|B2	-18526	NM_008986	19285	Mm.21864	NM_008986	ENSMUSG00000004044	Ptrf	2310075E07Rik|AW546441|Cav-p60|Cavin	polymerase I and transcript release factor	protein-coding
unique_peak2-38030-3-8--1.58390809140159-1.39487600375387	chr6	37825504	37825931	+	0	NA	intron (NM_145076, intron 1 of 18)	L1_Mus1|LINE|L1	4906	NM_145076	21848	Mm.41063	NM_145076		Trim24	A130082H20Rik|AI447469|D430004I05Rik|TIF1|TIF1-alpha|TIF1alpha|Tif1a	tripartite motif-containing 24	protein-coding
common_peak1-12282-20-67--1.59938805665915-5.47729977740497	chr17	44735806	44736518	+	0	NA	intron (NR_073425, intron 5 of 5)	intron (NR_073425, intron 5 of 5)	136963	NR_073425	12393	Mm.391013	NM_009820	ENSMUSG00000039153	Runx2	AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a	runt related transcription factor 2	protein-coding
common_peak2-30756-8-17--1.16470258349474-1.02063122982878	chr7	120982562	120983078	+	0	NA	intron (NM_145584, intron 3 of 15)	intron (NM_145584, intron 3 of 15)	73308	NM_145584	233744	Mm.334160	NM_145584	ENSMUSG00000038156	Spon1	AI666765|AW455831|BC020531|D330035F22Rik|FSP	spondin 1, (f-spondin) extracellular matrix protein	protein-coding
unique_peak1-3870-9-1-2.18961340640422-2.31132995230379	chr2	11360839	11361430	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-41007	NR_040615	77543	Mm.490670	NR_040615		8030442B05Rik	-	RIKEN cDNA 8030442B05 gene	ncRNA
common_peak2-26384-40-92--0.880183128356933-2.88982511489534	chr2	50296206	50297034	+	0	NA	Intergenic	MLT1B|LTR|MaLR	144290	NR_040362	100502624	Mm.382825	NR_040361		Gm13483	OTTMUSG00000012382	predicted gene 13483	ncRNA
common_peak1-7986-26-34--0.201383924786504-0.35535220421655	chr1	161034077	161035088	+	0	NA	Intergenic	Intergenic	-127875	NM_011931	26374	Mm.328135	NM_011931	ENSMUSG00000040782	Rfwd2	AI316802|C80879|Cop1	ring finger and WD repeat domain 2	protein-coding
common_peak1-12909-11-19--0.813234510635749-0.769930178837768	chr18	84413171	84413704	+	0	NA	intron (NM_001033341, intron 8 of 8)	intron (NM_001033341, intron 8 of 8)	155887	NM_146090	225791	Mm.147052	NM_146090	ENSMUSG00000049090	Zadh2	C530046K17Rik|Pthr3	zinc binding alcohol dehydrogenase, domain containing 2	protein-coding
common_peak1-11363-28-32-0.00856500046300912-0.30437085424443	chr15	90224113	90225006	+	0	NA	Intergenic	Intergenic	169768	NR_106106	102466838		NR_106106		Mir7648	mmu-mir-7648	microRNA mir-7648	ncRNA
common_peak1-14946-59-97--0.28934584324263-0.656128265330081	chr3	103790451	103792171	+	0	NA	intron (NM_001163469, intron 6 of 17)	intron (NM_001163469, intron 6 of 17)	-19072	NR_030676	100125931	Mm.400392	NR_030676	ENSMUSG00000089998	Phtf1os	A130049A11Rik	putative homeodomain transcription factor 1, opposite strand	ncRNA
common_peak1-17926-11-7-0.508693584251613-1.21681515183528	chr7	126897691	126898224	+	0	NA	Intergenic	Lx6|LINE|L1	-6480	NM_212441	20216	Mm.334199	NM_016870	ENSMUSG00000030935	Acsm3	Sa|Sah	acyl-CoA synthetase medium-chain family member 3	protein-coding
unique_peak1-726-21-4-2.24756117037887-3.74275476306371	chr10	95885903	95886902	+	0	NA	Intergenic	L1VL2|LINE|L1	-193233	NM_007569	12226	Mm.23811	NM_007569	ENSMUSG00000036478	Btg1	AI426953|AW546738	B cell translocation gene 1, anti-proliferative	protein-coding
common_peak2-25964-12-9-0.326847890200276-0.459837087125828	chr19	53141938	53142489	+	0	NA	Intergenic	Intergenic	-8529	NR_045320	78457	Mm.76932	NR_045320		1700054A03Rik	-	RIKEN cDNA 1700054A03 gene	ncRNA
common_peak1-9428-10-10--0.103016273628528-0.301029995663987	chr11	101627821	101628557	+	0	NA	3' UTR (NM_144831, exon 23 of 23)	3' UTR (NM_144831, exon 23 of 23)	18435	NM_008815	18612	Mm.5025	NM_008815	ENSMUSG00000017724	Etv4	AW414408|Pea-3|Pea3	ets variant 4	protein-coding
common_peak1-13001-15-16--0.075298090694683-0.301029995663976	chr19	4477818	4478513	+	0	NA	Intergenic	Intergenic	-1022	NM_134164	171180	Mm.262270	NM_134164	ENSMUSG00000049303	Syt12	-	synaptotagmin XII	protein-coding
common_peak1-14386-19-7-1.40268732666169-1.89173646618542	chr2	169608040	169608795	+	0	NA	intron (NM_080455, intron 1 of 1)	intron (NM_080455, intron 1 of 1)	149271	NM_080455	228911	Mm.315789	NM_080455	ENSMUSG00000047907	Tshz2	2900073F20Rik|B830045G17|Mtsh2|Sdccag33l|Tsh2|Zfp218|mKIAA4248|teashirt2	teashirt zinc finger family member 2	protein-coding
common_peak1-14224-11-28--1.34928741087596-1.9654245668484	chr2	152669368	152670104	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	-3964	NM_001141975	72119	Mm.407737	NM_028109	ENSMUSG00000027469	Tpx2	2610005B21Rik|DIL2|REPP86|p100	TPX2, microtubule-associated protein homolog (Xenopus laevis)	protein-coding
unique_peak2-35760-8-13--0.802132504110034-0.562038191119711	chr18	39735126	39735581	+	0	NA	Intergenic	Intergenic	-88454	NM_008173	14815	Mm.129481	NM_008173	ENSMUSG00000024431	Nr3c1	GR|Grl-1|Grl1	nuclear receptor subfamily 3, group C, member 1	protein-coding
unique_peak2-39073-3-8--1.58390809140159-1.39487600375387	chr8	72558567	72559102	+	0	NA	intron (NM_028993, intron 1 of 18)	B2_Mm2|SINE|B2	7799	NM_001167939	74549	Mm.269061	NM_028993	ENSMUSG00000031858	Mau2	9130404D08Rik|A930019L04Rik|C77863|C79014|Mau-2|mKIAA0892	MAU2 chromatid cohesion factor homolog (C. elegans)	protein-coding
unique_peak1-2384-27-6-2.18419102883763-4.54209996799533	chr15	97000284	97001443	+	0	NA	Intergenic	Intergenic	-76675	NM_172293	239647	Mm.130036	NM_172293	ENSMUSG00000044250	Pced1b	Fam113b	PC-esterase domain containing 1B	protein-coding
common_peak1-16870-32-23-0.694129518498504-1.20786488037717	chr6	58596024	58597011	+	0	NA	intron (NM_011920, intron 1 of 15)	intron (NM_011920, intron 1 of 15)	49851	NM_011920	26357	Mm.333096	NM_011920	ENSMUSG00000029802	Abcg2	ABC15|ABCP|AI428558|BCRP|Bcrp1|MXR|MXR1	ATP-binding cassette, sub-family G (WHITE), member 2	protein-coding
unique_peak1-3979-17-9-0.896368243317676-1.09394599973099	chr2	32880667	32881498	+	0	NA	intron (NM_178888, intron 12 of 28)	B2_Mm2|SINE|B2	-43506	NM_019488	56017	Mm.305754	NM_019488	ENSMUSG00000026791	Slc2a8	D2Ertd44e|GLUT8|GlutX1	solute carrier family 2, (facilitated glucose transporter), member 8	protein-coding
common_peak2-31012-13-17--0.391452970804544-0.364171515310935	chr8	11260052	11260752	+	0	NA	intron (NM_009931, intron 2 of 51)	intron (NM_009931, intron 2 of 51)	52424	NM_009931	12826	Mm.738	NM_009931	ENSMUSG00000031502	Col4a1	Bru|Col4a-1|Del(8)44H|Raw|Svc	collagen, type IV, alpha 1	protein-coding
unique_peak1-4985-7-0-2.79909083029819-2.40823996531185	chr4	114858429	114858843	+	0	NA	Intergenic	L1Md_F|LINE|L1	-52054	NM_001003947	81906	Mm.215544	NM_001003947	ENSMUSG00000047155	Cyp4x1	A230025G20|CYPIVX1|CYP_a|Cyp4a28-ps	cytochrome P450, family 4, subfamily x, polypeptide 1	protein-coding
common_peak1-14438-17-26--0.53659116395843-0.538442145997695	chr2	181364721	181365598	+	0	NA	intron (NM_133701, intron 6 of 20)	intron (NM_133701, intron 6 of 20)	29135	NM_133701	68879	Mm.292001	NM_133701	ENSMUSG00000002455	Prpf6	1190003A07Rik|2610031L17Rik|ANT-1|U5-102K	PRP6 pre-mRNA splicing factor 6 homolog (yeast)	protein-coding
unique_peak1-1705-7-1-1.79909083029819-1.80617997398389	chr13	92070197	92070689	+	0	NA	intron (NM_009027, intron 14 of 23)	ORR1A4|LTR|MaLR	-53953	NM_198415	76722	Mm.316438	NM_198415	ENSMUSG00000021622	Ckmt2	2300008A19Rik|ScCKmit	creatine kinase, mitochondrial 2	protein-coding
common_peak1-14443-16-13-0.310908720210457-0.417187467413082	chr2	181592152	181592827	+	0	NA	TTS (NM_001291211)	TTS (NM_001291211)	-6576	NM_025901	67005	Mm.271986	NM_025901	ENSMUSG00000038628	Polr3k	12.3kDa|1500004O14Rik|AI196849|AU014893|C11|RPC10|RPC11	polymerase (RNA) III (DNA directed) polypeptide K	protein-coding
common_peak2-23242-42-93--0.812259523810454-2.57496839624367	chr15	10469620	10471106	+	0	NA	intron (NM_029430, intron 3 of 10)	intron (NM_029430, intron 3 of 10)	18060	NM_029430	75777	Mm.48812	NM_029430	ENSMUSG00000022249	Ttc23l	4930401A09Rik	tetratricopeptide repeat domain 23-like	protein-coding
unique_peak1-1848-10-4-1.03448725012141-1.5150158574804	chr14	47803540	47804063	+	0	NA	intron (NM_008102, intron 1 of 5)	ORR1B1|LTR|MaLR	5276	NM_008102	14528	Mm.10651	NM_008102	ENSMUSG00000037580	Gch1	GTP-CH|GTPCH|Gch	GTP cyclohydrolase 1	protein-coding
common_peak1-12753-11-25--1.19174613388948-1.51503956548638	chr18	57878992	57879512	+	0	NA	intron (NM_029290, intron 6 of 6)	MTEb|LTR|MaLR	-81013	NR_045360	70157	Mm.490532	NR_045360		2210409D07Rik	-	RIKEN cDNA 2210409D07 gene	ncRNA
unique_peak1-3374-34-8-2.21214352555895-5.80521965470947	chr19	3634760	3636205	+	0	NA	intron (NM_008513, intron 5 of 22)	intron (NM_008513, intron 5 of 22)	51082	NM_008513	16973	Mm.274581	NM_008513	ENSMUSG00000024913	Lrp5	BMND1|HBM|LR3|LRP7|OPPG|mKIAA4142	low density lipoprotein receptor-related protein 5	protein-coding
common_peak2-29490-13-17--0.391452970804544-0.364171515310935	chr6	31217048	31217629	+	0	NA	intron (NR_040257, intron 2 of 7)	intron (NR_040257, intron 2 of 7)	46987	NR_040261	73652	Mm.441297	NR_040257	ENSMUSG00000087380	2210408F21Rik	-	RIKEN cDNA 2210408F21 gene	ncRNA
common_peak2-31620-12-8-0.478850983645327-0.562038191119709	chr8	123051649	123052221	+	0	NA	intron (NM_198671, intron 1 of 15)	intron (NM_198671, intron 1 of 15)	-7822	NM_001145897	382034	Mm.334856	NM_198671	ENSMUSG00000031822	Gse1	2210013I18Rik|mKIAA0182	genetic suppressor element 1	protein-coding
unique_peak1-6544-10-3-1.35641534500877-1.75805390616669	chr7	127002873	127003512	+	0	NA	exon (NM_173408, exon 2 of 3)	exon (NM_173408, exon 2 of 3)	35780	NM_173408	233805	Mm.31539	NM_173408	ENSMUSG00000048787	Dcun1d3	1700020A13Rik|BC030335	DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)	protein-coding
common_peak2-21724-5-6--0.511735258063458-0.947717972411649	chr11	113265859	113266302	+	0	NA	intron (NM_027216, intron 5 of 9)	L1MA4|LINE|L1	161049	NM_001166503	69806	Mm.341021	NM_027216	ENSMUSG00000041654	Slc39a11	1810074D23Rik	solute carrier family 39 (metal ion transporter), member 11	protein-coding
unique_peak2-34945-0-10--4.29956254911151-2.57096726280955	chr15	89315404	89315791	+	0	NA	TTS (NR_077233)	TTS (NR_077233)	-7742	NM_009713	11883	Mm.620	NM_009713	ENSMUSG00000022620	Arsa	AS-A|ASA|AW212749|As-2|As2|TISP73	arylsulfatase A	protein-coding
common_peak2-23813-37-10-2.06656145284852-5.74704049785211	chr15	101078069	101078642	+	0	NA	Intergenic	Intergenic	-18922	NM_010444	15370	Mm.119	NM_010444	ENSMUSG00000023034	Nr4a1	GFRP1|Gfrp|Hbr-1|Hbr1|Hmr|N10|NGFI-B|NGFIB|NP10|TIS1|TR3|nur77	nuclear receptor subfamily 4, group A, member 1	protein-coding
common_peak2-22607-13-16--0.30899081061257-0.330004445983672	chr13	74462588	74463348	+	0	NA	intron (NM_023281, intron 13 of 14)	L1_Mus1|LINE|L1	-8194	NM_011051	18570	Mm.24254	NM_011051	ENSMUSG00000021576	Pdcd6	AV299538|Alg2|MA-3|PS2|alg-2	programmed cell death 6	protein-coding
common_peak2-25185-59-40-0.967811996254494-3.25247856210074	chr18	57354538	57355461	+	0	NA	intron (NM_001001979, intron 4 of 24)	intron (NM_001001979, intron 4 of 24)	62255	NM_001001979	70417	Mm.297863	NM_001001979	ENSMUSG00000024593	Megf10	3000002B06Rik|Gm331	multiple EGF-like-domains 10	protein-coding
common_peak2-22412-15-24--0.631691439219068-0.650819692678081	chr13	34993628	34994284	+	0	NA	3' UTR (NM_013830, exon 15 of 15)	3' UTR (NM_013830, exon 15 of 15)	17905	NM_027967	71864	Mm.380836	NM_027967	ENSMUSG00000021414	Fam217a	1700026J04Rik	family with sequence similarity 217, member A	protein-coding
unique_peak1-2071-9-1-2.18961340640422-2.31132995230379	chr15	36347556	36348074	+	0	NA	Intergenic	Intergenic	78731	NM_175134	68839	Mm.396537	NM_175134	ENSMUSG00000048307	Ankrd46	1110054N06Rik|AI314978|AI987733	ankyrin repeat domain 46	protein-coding
common_peak2-21826-98-115-0.343787698302979-1.15185038250096	chr11	120233447	120235251	+	0	NA	intron (NM_027980, intron 6 of 9)	intron (NM_027980, intron 6 of 9)	5711	NM_027980	71885	Mm.274890	NM_027980	ENSMUSG00000025384	2310003H01Rik	Faap100	RIKEN cDNA 2310003H01 gene	protein-coding
common_peak1-12994-18-19--0.00900894365901106-0.306598483909153	chr19	4268707	4269392	+	0	NA	exon (NM_198113, exon 1 of 14)	exon (NM_198113, exon 1 of 14)	123	NM_198113	245857	Mm.248388	NM_198113	ENSMUSG00000034616	Ssh3	BC028922|SSH-3|mSSH-3L	slingshot homolog 3 (Drosophila)	protein-coding
unique_peak2-39394-5-15--1.70438033600585-1.4372489031793	chr9	26999020	26999532	+	0	NA	Intergenic	Intergenic	-36270	NM_023277	83964	Mm.28770	NM_023277	ENSMUSG00000031990	Jam3	1110002N23Rik|JAM-3|JAM-C|Jcam3	junction adhesion molecule 3	protein-coding
unique_peak1-3031-9-1-2.18961340640422-2.31132995230379	chr18	57917073	57917601	+	0	NA	Intergenic	Intergenic	-119098	NR_045360	70157	Mm.490532	NR_045360		2210409D07Rik	-	RIKEN cDNA 2210409D07 gene	ncRNA
common_peak1-16617-20-16-0.400611943340854-0.507611860039817	chr6	33947264	33948313	+	0	NA	Intergenic	Intergenic	-31660	NM_028886	74354	Mm.127952	NM_028886	ENSMUSG00000056215	Lrguk	4921528H16Rik	leucine-rich repeats and guanylate kinase domain containing	protein-coding
unique_peak1-4107-20-10-1.0286431659539-1.30248952876293	chr2	77265768	77266790	+	0	NA	intron (NM_178723, intron 6 of 9)	Lx7|LINE|L1	-34422	NR_040368	100503106	Mm.443215	NR_040368	ENSMUSG00000085845	Gm13944	OTTMUSG00000015155	predicted gene 13944	ncRNA
common_peak1-12973-16-21--0.341167976369236-0.392630012299441	chr19	4000352	4001186	+	0	NA	exon (NM_025529, exon 1 of 4)	exon (NM_025529, exon 1 of 4)	189	NM_025529	66387	Mm.259222	NM_025529	ENSMUSG00000024869	Nudt8	2310039H17Rik	nudix (nucleoside diphosphate linked moiety X)-type motif 8	protein-coding
unique_peak2-33413-1-6--2.43441193227435-1.56314192529759	chr11	58960569	58960729	+	0	NA	Intergenic	L1M4b|LINE|L1	-10772	NM_199152	380698	Mm.339542	NM_199152	ENSMUSG00000061462	Obscn	BC046431|Gm878|OTTMUSG00000005786|UNC89	obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF	protein-coding
common_peak1-12666-32-39--0.0428360756677026-0.301029995663967	chr18	36669761	36670504	+	0	NA	intron (NM_010415, intron 3 of 5)	intron (NM_010415, intron 3 of 5)	5327	NM_010415	15200	Mm.289681	NM_010415	ENSMUSG00000024486	Hbegf	AW047313|Dtr|Dts|Hegfl	heparin-binding EGF-like growth factor	protein-coding
common_peak1-13199-29-14-1.20539948500659-2.32006591355686	chr19	21651759	21652691	+	0	NA	Intergenic	Intergenic	75056	NM_025423	66206	Mm.272430	NM_025423	ENSMUSG00000035171	1110059E24Rik	-	RIKEN cDNA 1110059E24 gene	protein-coding
common_peak1-11874-22-42--0.778980649614693-1.24799833770813	chr16	94327661	94328750	+	0	NA	intron (NM_011377, intron 7 of 10)	intron (NM_011377, intron 7 of 10)	181258	NM_139145	110948	Mm.30921	NM_139145	ENSMUSG00000040820	Hlcs	410I21.SP6|D16Jhu34	holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase)	protein-coding
common_peak1-13965-29-13-1.30493515855751-2.5745355257554	chr2	92738824	92740162	+	0	NA	Intergenic	Intergenic	-15765	NM_030725	80976	Mm.33490	NM_030725	ENSMUSG00000027220	Syt13	5730409J20Rik|AI549909|mKIAA1427	synaptotagmin XIII	protein-coding
unique_peak2-39290-6-14--1.34149248522822-1.01572999746118	chr8	123021284	123022023	+	0	NA	intron (NM_198671, intron 1 of 15)	intron (NM_198671, intron 1 of 15)	8887	NM_198671	382034	Mm.334856	NM_198671	ENSMUSG00000031822	Gse1	2210013I18Rik|mKIAA0182	genetic suppressor element 1	protein-coding
unique_peak1-3045-8-1-2.00522241794757-2.05605744720049	chr18	5425783	5426366	+	0	NA	Intergenic	Intergenic	-91637	NM_178722	240186	Mm.118257	NM_178722	ENSMUSG00000050945	Zfp438	9430031G09|9430091M14Rik|B830013J05Rik	zinc finger protein 438	protein-coding
common_peak2-22928-19-27--0.404667595395917-0.464317215211849	chr14	46831535	46832727	+	0	NA	Intergenic	L1Md_A|LINE|L1	128429	NR_002875	218963	Mm.282093	NR_002875		Gm1821	-	ubiquitin pseudogene	pseudo
common_peak2-23820-54-66-0.106996571171962-0.357694962737398	chr15	101265811	101267248	+	0	NA	intron (NM_001003668, intron 2 of 8)	B3|SINE|B2	2706	NM_001003668	406219	Mm.347934	NM_001003668	ENSMUSG00000047641	Krt83	Krt2-25	keratin 83	protein-coding
common_peak2-21110-29-26-0.357402578451643-0.590428395010953	chr11	52333292	52333863	+	0	NA	Intergenic	MLT1L|LTR|MaLR	123647	NM_153117	213673	Mm.291979	NM_153117	ENSMUSG00000036275	9530068E07Rik	C85061|Kct2	RIKEN cDNA 9530068E07 gene	protein-coding
unique_peak1-4487-42-6-2.93497440580958-9.8919252452264	chr3	99253256	99254652	+	0	NA	Intergenic	Intergenic	196271	NM_009323	21384	Mm.88761	NM_009323	ENSMUSG00000027868	Tbx15	Tbx14|Tbx8|de	T-box 15	protein-coding
common_peak1-17896-15-17--0.157760250886656-0.307611222530528	chr7	120677410	120678176	+	0	NA	intron (NM_001285831, intron 2 of 12)	intron (NM_001285831, intron 2 of 12)	20445	NM_027379	67420	Mm.206919	NM_026143	ENSMUSG00000030759	Far1	2600011M19Rik|2900034E22Rik|3732409C05Rik|AI850429|Mlstd2	fatty acyl CoA reductase 1	protein-coding
common_peak2-30473-10-10--0.103016273628528-0.301029995663987	chr7	47110804	47111386	+	0	NA	Intergenic	L1Md_F2|LINE|L1	337959	NM_001004139	70227	Mm.333800	NM_001004139	ENSMUSG00000068959	Zfp619	3000002G13Rik	zinc finger protein 619	protein-coding
common_peak1-19489-39-81--0.74179075769893-2.02918808266059	chrX	151519955	151521260	+	0	NA	Intergenic	L1Md_T|LINE|L1	3726	NM_020015	17137	Mm.377096	NM_020015	ENSMUSG00000096644	Magea1	Mage-a1	melanoma antigen, family A, 1	protein-coding
unique_peak1-1025-7-2-1.21412832957703-1.45399745587252	chr11	75279478	75279927	+	0	NA	non-coding (NR_030711, exon 3 of 3)	non-coding (NR_030711, exon 3 of 3)	-1850	NM_001291156	380712	Mm.41393	NM_027249	ENSMUSG00000038217	Tlcd2	-	TLC domain containing 2	protein-coding
unique_peak2-36668-5-12--1.40482005414695-1.62698961692433	chr3	30106379	30106967	+	0	NA	Intergenic	Intergenic	-194547	NM_007963	14013	Mm.56965	NM_007963	ENSMUSG00000027684	Mecom	D630039M04Rik|Evi-1|Evi1|Jbo|Mds|Mds1|Mds1-Evi1|Prdm3|Znfpr1b1	MDS1 and EVI1 complex locus	protein-coding
unique_peak2-34913-8-14--0.901668177660948-0.660903317613906	chr15	83448309	83448943	+	0	NA	intron (NM_022723, intron 14 of 21)	intron (NM_022723, intron 14 of 21)	-23039	NM_183017	223723	Mm.46778	NM_183017	ENSMUSG00000016757	Ttll12	BC055368|D430005B17	tubulin tyrosine ligase-like family, member 12	protein-coding
common_peak2-25533-52-49-0.464403800490975-1.04068780415874	chr19	5839981	5841983	+	0	NA	Intergenic	PB1D10|SINE|Alu	4496	NR_003513	66961	Mm.281895	NR_003513		Neat1	2310043N10Rik|VINC	nuclear paraspeckle assembly transcript 1 (non-protein coding)	ncRNA
common_peak2-27113-24-27--0.0141450192898871-0.304978344874324	chr3	10366585	10367455	+	0	NA	promoter-TSS (NM_025519)	promoter-TSS (NM_025519)	47	NM_025519	66371	Mm.366147	NM_025519	ENSMUSG00000027536	Chmp4c	2010012P02Rik|2210015K02Rik|2310010I16Rik|Shax3|Snf7-3	charged multivesicular body protein 4C	protein-coding
common_peak2-27073-7-9--0.522837264589173-1.05908390183068	chr3	14646958	14647486	+	0	NA	intron (NM_024495, intron 2 of 6)	B4A|SINE|B4	5495	NM_024495	71934	Mm.158776	NM_024495	ENSMUSG00000027555	Car13	2310075C21Rik|Ca13	carbonic anhydrase 13	protein-coding
common_peak1-8995-24-23-0.208247402046561-0.407645899519042	chr11	59847946	59848868	+	0	NA	intron (NM_001290012, intron 1 of 6)	intron (NM_001290012, intron 1 of 6)	2100	NM_008819	18618	Mm.2731	NM_008819	ENSMUSG00000000301	Pemt	PEAMT|PEMT2|Pempt|Pempt2	phosphatidylethanolamine N-methyltransferase	protein-coding
unique_peak2-32953-4-4--0.345388608740609-0.864171920961574	chr10	41552895	41553246	+	0	NA	intron (NM_001162908, intron 1 of 9)	intron (NM_001162908, intron 1 of 9)	22690	NM_001162908	140742	Mm.139418	NM_001013370	ENSMUSG00000038332	Sesn1	1110002G11Rik|AU044290|Pa26|Sest1	sestrin 1	protein-coding
unique_peak1-6983-7-2-1.21412832957703-1.45399745587252	chr8	120259464	120260008	+	0	NA	intron (NM_008290, intron 2 of 4)	B3A|SINE|B2	33890	NM_008290	15486	Mm.276466	NM_008290	ENSMUSG00000031844	Hsd17b2	AI194836|AI194967|AI255511	hydroxysteroid (17-beta) dehydrogenase 2	protein-coding
common_peak1-16464-11-19--0.813234510635749-0.769930178837768	chr5	136632418	136632931	+	0	NA	intron (NM_178751, intron 2 of 2)	IAPEz-int|LTR|ERVK	13852	NM_178751	269717	Mm.308396	NM_178751	ENSMUSG00000039747	Orai2	A730041O15Rik|Tmem142b	ORAI calcium release-activated calcium modulator 2	protein-coding
common_peak1-18729-62-105--0.317168995761114-0.759030078841297	chr8	123373187	123374685	+	0	NA	Intergenic	Intergenic	113660	NM_008320	15900	Mm.334861	NM_008320	ENSMUSG00000041515	Irf8	AI893568|ICSBP|IRF-8|Icsbp1|Myls	interferon regulatory factor 8	protein-coding
common_peak1-11485-27-26-0.236658448731768-0.436052471002789	chr15	102247201	102248380	+	0	NA	intron (NM_013672, intron 3 of 5)	B4|SINE|B4	11043	NM_013672	20683	Mm.4618	NM_013672	ENSMUSG00000001280	Sp1	1110003E12Rik|AA450830|AI845540|Sp1-1	trans-acting transcription factor 1	protein-coding
common_peak1-15858-12-22--0.874785970969374-0.809260849721102	chr5	3870093	3870676	+	0	NA	Intergenic	RLTR25A|LTR|ERVK	23549	NM_001013023	545725	Mm.99593	NM_172135	ENSMUSG00000040429	Mterf1a	4931431L11Rik|9230106K09Rik|Mterf|Mterf1	mitochondrial transcription termination factor 1a	protein-coding
common_peak2-22867-39-52--0.112159207644045-0.320382596085891	chr14	29978260	29979312	+	0	NA	intron (NM_009785, intron 13 of 37)	intron (NM_009785, intron 13 of 37)	147392	NM_176920	319476	Mm.95780	NM_176920	ENSMUSG00000045776	Lrtm1	A930016D02Rik	leucine-rich repeats and transmembrane domains 1	protein-coding
common_peak1-10093-100-100-0.578560292058995-2.56697385685128	chr13	24564679	24567207	+	0	NA	3' UTR (NM_001111110, exon 17 of 17)	3' UTR (NM_001111110, exon 17 of 17)	58952	NM_001284520	12763	Mm.8396	NM_007717	ENSMUSG00000016756	Cmah	-	cytidine monophospho-N-acetylneuraminic acid hydroxylase	protein-coding
unique_peak1-3280-29-4-2.79036198572775-6.44030167009728	chr18	73946354	73947735	+	0	NA	intron (NM_145494, intron 11 of 15)	intron (NM_145494, intron 11 of 15)	28002	NM_145494	107029	Mm.36817	NM_145494	ENSMUSG00000024556	Me2	AW120568|D030040L20Rik|NAD-ME	malic enzyme 2, NAD(+)-dependent, mitochondrial	protein-coding
common_peak2-26929-14-17--0.270708841084668-0.328191099940267	chr2	163579053	163579796	+	0	NA	Intergenic	Intergenic	-3449	NM_001272052	11486	Mm.388	NM_007398	ENSMUSG00000017697	Ada	-	adenosine deaminase	protein-coding
unique_peak1-6584-11-1-2.50869358425161-2.83420869758413	chr7	142498703	142499198	+	0	NA	Intergenic	MTEb|LTR|MaLR	38648	NM_001163611	100043254	Mm.192092	NM_001163611	ENSMUSG00000073804	Nps	ENSMUSG00000073804	neuropeptide S	protein-coding
common_peak2-30181-14-21--0.560215458279653-0.519193887192484	chr7	4865761	4866654	+	0	NA	promoter-TSS (NM_170759)	promoter-TSS (NM_170759)	-612	NM_170759	232816	Mm.27442	NM_170759	ENSMUSG00000074406	Zfp628	Zec|Znf628	zinc finger protein 628	protein-coding
unique_peak1-4471-39-13-1.80840632486155-5.13747647932512	chr2	180961307	180962547	+	0	NA	TTS (NM_183162)	TTS (NM_183162)	7206	NM_199312	332713	Mm.23349	NM_199312	ENSMUSG00000047841	BC051628	1700026M20Rik	cDNA sequence BC051628	protein-coding
common_peak2-26189-11-15--0.491306415748387-0.435191258261915	chr2	25224328	25224761	+	0	NA	Intergenic	MTB|LTR|MaLR	-3011	NM_001290407	72080	Mm.250293	NM_001081085	ENSMUSG00000026955	Sapcd2	2010317E24Rik|6030458L21Rik|AL033337|ang	suppressor APC domain containing 2	protein-coding
common_peak1-7591-19-43--1.05674429197561-1.97718016252453	chr1	55087233	55088116	+	0	NA	Intergenic	B3|SINE|B2	-3352	NM_031179	81898	Mm.279736	NM_031179	ENSMUSG00000025982	Sf3b1	155kDa|2810001M05Rik|AA409119|Prp10|SAP155|SF3b155|TA-8|Targ4	splicing factor 3b, subunit 1	protein-coding
common_peak1-10936-40-67--0.428487158499241-0.773583383841054	chr15	11994643	11996230	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-52170	NM_011767	22763	Mm.273496	NM_011767	ENSMUSG00000022201	Zfr	C920030H05Rik	zinc finger RNA binding protein	protein-coding
common_peak2-24216-32-58--0.603551030142182-1.11442465192823	chr16	78300782	78302605	+	0	NA	promoter-TSS (NM_009988)	promoter-TSS (NM_009988)	-223	NM_009988	13052	Mm.66222	NM_009988	ENSMUSG00000022865	Cxadr	2610206D03Rik|AU016810|AW553441|CAR|MCAR|MCVADR	coxsackie virus and adenovirus receptor	protein-coding
common_peak1-10313-20-13-0.680719862533589-0.809260849721102	chr13	67637027	67638052	+	0	NA	Intergenic	RLTR16|LTR|ERVK	-10372	NM_133228	170763	Mm.491205	NM_133228	ENSMUSG00000097333	Zfp87	2210039O17Rik|4631412O18Rik|KRAB4|Mzf22|Zfp72	zinc finger protein 87	protein-coding
common_peak2-30274-17-32--0.826097781153416-1.02859851787301	chr7	16311932	16313314	+	0	NA	Intergenic	L1_Mus2|LINE|L1	-23096	NM_145709	252829	Mm.222738	NM_145709		Obox5	C87544	oocyte specific homeobox 5	protein-coding
common_peak2-23659-68-116--0.300403940285109-0.755630265713883	chr15	85335876	85337335	+	0	NA	Intergenic	Intergenic	-2948	NM_001256072	328577	Mm.212960	NM_001256072	ENSMUSG00000096607	7530416G11Rik	-	RIKEN cDNA 7530416G11 gene	protein-coding
unique_peak2-38908-5-8--0.874305337448166-1.10484139239135	chr8	13649286	13649831	+	0	NA	intron (NM_009025, intron 1 of 23)	GA-rich|Low_complexity|Low_complexity	28029	NM_009025	19414	Mm.18517	NM_009025	ENSMUSG00000031453	Rasa3	AI326412|C86362|E130011G04|GAPIII|scat	RAS p21 protein activator 3	protein-coding
unique_peak1-4889-10-5-0.771452844287613-1.33892459842472	chr4	43730299	43730819	+	0	NA	Intergenic	Intergenic	-9511	NM_027511	100039781	Mm.18796	NM_027511		Hrct1	3830408D24Rik	histidine rich carboxyl terminus 1	protein-coding
unique_peak2-35231-4-7--1.02346051385325-1.09384600808989	chr16	92654456	92654851	+	0	NA	intron (NM_001111023, intron 3 of 5)	intron (NM_001111023, intron 3 of 5)	42921	NM_001111023	12394	Mm.4081	NM_009821	ENSMUSG00000022952	Runx1	AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b	runt related transcription factor 1	protein-coding
common_peak1-8516-37-63--0.474006928514181-0.879126120438037	chr10	84533312	84534570	+	0	NA	Intergenic	RLTR23|LTR|ERV1	31299	NM_010214	14202	Mm.46163	NM_010214	ENSMUSG00000050035	Fhl4	-	four and a half LIM domains 4	protein-coding
common_peak1-8933-38-59--0.335437936309988-0.547023400307267	chr11	52396300	52397158	+	0	NA	Intergenic	B3A|SINE|B2	-181479	NM_177059	320027	Mm.44518	NM_177059		Fstl4	B230374F23Rik|SPIG1|mKIAA1061	follistatin-like 4	protein-coding
unique_peak2-39989-5-8--0.874305337448166-1.10484139239135	chrX	159627673	159628172	+	0	NA	Intergenic	Intergenic	-225391	NM_009789	12309	Mm.6891	NM_009789	ENSMUSG00000040808	S100g	AU042539|CABP1|CaBP-D9K|Cabp9k|Calb3	S100 calcium binding protein G	protein-coding
unique_peak2-35338-5-5--0.289342836727009-0.909929411522249	chr17	24152504	24152832	+	0	NA	Intergenic	Intergenic	-17601	NM_133731	70835	Mm.157351	NM_133731	ENSMUSG00000045027	Prss22	4733401N09Rik|BSSP-4|SP001LA	protease, serine 22	protein-coding
common_peak2-28361-20-33--0.599388056659146-0.781990829058356	chr4	136450471	136451624	+	0	NA	TTS (NM_007572)	TTS (NM_007572)	-2218	NM_007574	12262	Mm.439732	NM_007574	ENSMUSG00000036896	C1qc	AI385742|C1qg|Ciqc	complement component 1, q subcomponent, C chain	protein-coding
common_peak2-25741-10-7-0.356415345008769-1.12966497611638	chr19	25244281	25244687	+	0	NA	intron (NM_028785, intron 34 of 47)	intron (NM_028785, intron 34 of 47)	-67208	NM_181404	107351	Mm.260722	NM_181404	ENSMUSG00000032702	Kank1	A930031B09Rik|AU015049|AW121052|Ankrd15|D330024H06Rik|mKIAA0172	KN motif and ankyrin repeat domains 1	protein-coding
common_peak2-26661-6-11--1.01956439034085-1.32595962126035	chr2	121448471	121449003	+	0	NA	intron (NM_172673, intron 1 of 14)	B1F2|SINE|Alu	116278	NM_001290986	241627	Mm.293284	NM_030234	ENSMUSG00000027242	Wdr76	5830411K18Rik|6030457D09|AA517836	WD repeat domain 76	protein-coding
common_peak2-29833-31-32-0.18084455145467-0.379775532323848	chr6	94282594	94283994	+	0	NA	Intergenic	L1MB8|LINE|L1	-49383	NM_001286785	14924	Mm.217216	NM_010367	ENSMUSG00000045095	Magi1	AIP3|BAP1|Baiap1|Gukmi1|MAGI1c|Magi-1|TNRC19|WWP3|mKIAA4129	membrane associated guanylate kinase, WW and PDZ domain containing 1	protein-coding
common_peak2-29695-27-43--0.467885667742062-0.652627812244285	chr6	82652456	82653323	+	0	NA	Intergenic	Intergenic	-50030	NM_025882	66979	Mm.195753	NM_025882	ENSMUSG00000030042	Pole4	2400007P05Rik|5830430F06Rik	polymerase (DNA-directed), epsilon 4 (p12 subunit)	protein-coding
common_peak2-25314-79-81-0.471283162558536-1.51956951597777	chr18	75342352	75343587	+	0	NA	intron (NM_027727, intron 13 of 16)	intron (NM_027727, intron 13 of 16)	114002	NR_045394	100503117	Mm.250517	NR_045393		2010010A06Rik	5033420E22Rik	RIKEN cDNA 2010010A06 gene	ncRNA
unique_peak2-38193-3-14--2.3208736855678-2.58603100924543	chr6	99520454	99520927	+	0	NA	Intergenic	PB1D10|SINE|Alu	96075	NM_025829	66892	Mm.32889	NM_025829	ENSMUSG00000093661	Eif4e3	1300018P11Rik|AI451927|eIF4E-3	eukaryotic translation initiation factor 4E member 3	protein-coding
common_peak1-14476-58-72-0.106125376010479-0.371520254652761	chr3	121814286	121816179	+	0	NA	intron (NM_007378, intron 15 of 49)	intron (NM_007378, intron 15 of 49)	67854	NM_007378	11304	Mm.3918	NM_007378	ENSMUSG00000028125	Abca4	AW050280|Abc10|Abcr|D430003I15Rik|RmP	ATP-binding cassette, sub-family A (ABC1), member 4	protein-coding
unique_peak1-2344-14-2-2.31425365963649-3.28500101358144	chr15	85568019	85568761	+	0	NA	intron (NM_011144, intron 2 of 7)	B1_Mur4|SINE|Alu	2184	NM_011144	19013	Mm.212789	NM_011144		Ppara	4933429D07Rik|AW742785|Nr1c1|PPAR-alpha|PPARalpha|Ppar	peroxisome proliferator activated receptor alpha	protein-coding
unique_peak2-37153-2-10--2.37688587490062-2.09384600808989	chr4	40839440	40839906	+	0	NA	Intergenic	RSINE1|SINE|B4	-27416	NM_011463	20731	Mm.25246	NM_011463	ENSMUSG00000028415	Spink4	MPGC60	serine peptidase inhibitor, Kazal type 4	protein-coding
unique_peak2-33213-9-18--1.05831410703937-0.965105923112245	chr10	116266955	116267610	+	0	NA	intron (NM_001033333, intron 9 of 24)	intron (NM_001033333, intron 9 of 24)	66653	NM_001033333	237558	Mm.336386	NM_001033333	ENSMUSG00000034057	Myrfl	Gm239	myelin regulatory factor-like	protein-coding
common_peak2-25966-19-11-0.81772482594053-0.991115276827166	chr19	53311649	53312274	+	0	NA	intron (NM_001164101, intron 10 of 13)	intron (NM_001164101, intron 10 of 13)	17734	NR_036590	69319	Mm.57452	NR_036590		1700001K23Rik	-	RIKEN cDNA 1700001K23 gene	ncRNA
common_peak2-26851-43-65--0.261830933834751-0.482196053595805	chr2	154656995	154658239	+	0	NA	intron (NM_023130, intron 2 of 8)	intron (NM_023130, intron 2 of 8)	40771	NM_001139511	19383	Mm.221440	NM_023130	ENSMUSG00000027593	Raly	AI663842|Merc	hnRNP-associated with lethal yellow	protein-coding
unique_peak1-1067-11-2-1.92373108353046-2.32232533660526	chr11	83578242	83578841	+	0	NA	intron (NM_145432, intron 7 of 19)	intron (NM_145432, intron 7 of 19)	11402	NM_145432	217026	Mm.117874	NM_145432	ENSMUSG00000000976	Heatr6	2700008B19Rik|BB135312|BB249351	HEAT repeat containing 6	protein-coding
common_peak1-12706-18-11-0.727956650507195-0.876666802405043	chr18	46311201	46312051	+	0	NA	Intergenic	Intergenic	46846	NM_001170855	28105	Mm.277382	NM_178872	ENSMUSG00000033949	Trim36	D18Wsu100e|haprin	tripartite motif-containing 36	protein-coding
common_peak2-23966-25-26-0.106962403181638-0.336580821310522	chr16	16983424	16984119	+	0	NA	exon (NM_001038663, exon 1 of 8)	exon (NM_001038663, exon 1 of 8)	296	NM_001038663	26413	Mm.196581	NM_011949	ENSMUSG00000063358	Mapk1	9030612K14Rik|AA407128|AU018647|C78273|ERK|Erk2|MAPK2|PRKM2|Prkm1|p41mapk|p42mapk	mitogen-activated protein kinase 1	protein-coding
common_peak1-18099-19-14-0.495796731053168-0.607095980551316	chr8	121585132	121585894	+	0	NA	intron (NM_019707, intron 6 of 13)	intron (NM_019707, intron 6 of 13)	-282925	NM_024219	68196	Mm.358714	NM_024219	ENSMUSG00000031839	Hsbp1	0610007A03Rik|AA408769|Hsp25	heat shock factor binding protein 1	protein-coding
common_peak1-7634-20-18-0.240147271147608-0.388034239052786	chr1	64799909	64800598	+	0	NA	Intergenic	Intergenic	-15929	NM_022721	14367	Mm.150813	NM_022721	ENSMUSG00000045005	Fzd5	5330434N09Rik|AI427138|Fz-5|Fz5|mFz5	frizzled homolog 5 (Drosophila)	protein-coding
common_peak2-21835-100-136-0.138739691850263-0.471344968188905	chr11	120580887	120582514	+	0	NA	intron (NM_153545, intron 17 of 17)	intron (NM_153545, intron 17 of 17)	-1082	NM_133223	170758	Mm.34008	NM_133223	ENSMUSG00000018012	Rac3	Rac1B	RAS-related C3 botulinum substrate 3	protein-coding
common_peak2-28331-24-29--0.113680692840802-0.304839791830752	chr4	134482008	134482941	+	0	NA	intron (NM_023665, intron 3 of 4)	intron (NM_023665, intron 3 of 4)	2934	NM_023665	27981	Mm.331964	NM_023665	ENSMUSG00000037266	Rsrp1	2700043I21Rik|D4Ucla2|D4Wsu53e	arginine/serine rich protein 1	protein-coding
common_peak1-14484-23-46--0.832821347168557-1.52341724501299	chr3	5218931	5219860	+	0	NA	intron (NM_030708, intron 1 of 10)	CpG	841	NM_030708	80892	Mm.41522	NM_030708	ENSMUSG00000025255	Zfhx4	A930021B15|C130041O22Rik|Zfh-4|Zfh4	zinc finger homeodomain 4	protein-coding
unique_peak1-6302-9-2-1.60465090568306-1.87199725847353	chr7	35141119	35141639	+	0	NA	intron (NM_025948, intron 6 of 10)	intron (NM_025948, intron 6 of 10)	33180	NM_025948	67070	Mm.276503	NM_025948	ENSMUSG00000066568	Lsm14a	2700023B17Rik|AA407828|AU017544|Tral	LSM14 homolog A (SCD6, S. cerevisiae)	protein-coding
common_peak2-21381-11-10-0.0492619656143161-0.31137425193576	chr11	79071803	79072227	+	0	NA	Intergenic	Intergenic	-3818	NM_019653	78889	Mm.307022	NM_019653	ENSMUSG00000017677	Wsb1	1110056B13Rik|2700038M07Rik	WD repeat and SOCS box-containing 1	protein-coding
common_peak2-29205-64-73-0.255993036079653-0.604937194445238	chr5	136986750	136987890	+	0	NA	intron (NM_001291238, intron 1 of 22)	intron (NM_001291238, intron 1 of 22)	54531	NM_001291239	13047	Mm.320317	NM_009986	ENSMUSG00000029705	Cux1	CDP|Cutl1|Cux|Cux-1	cut-like homeobox 1	protein-coding
unique_peak1-4147-18-3-2.31291915122835-3.35694334496952	chr2	93902745	93903492	+	0	NA	intron (NM_019657, intron 6 of 10)	MamSINE1|SINE|tRNA	-52231	NM_026944	69113	Mm.272498	NM_026944	ENSMUSG00000040174	Alkbh3	1700108H04Rik|1810020C19Rik|Abh3|mABH3	alkB, alkylation repair homolog 3 (E. coli)	protein-coding
unique_peak2-34818-10-16--0.73104749624157-0.604422558181019	chr15	74930929	74931959	+	0	NA	Intergenic	L1Md_F|LINE|L1	10935	NM_001099217	100041546	Mm.482110	NM_001099217	ENSMUSG00000022584	Ly6c2	Ly-6C.2|Ly-6C2	lymphocyte antigen 6 complex, locus C2	protein-coding
common_peak2-27870-75-113--0.0938230224214562-0.336567586798303	chr3	159839251	159841531	+	0	NA	Intergenic	Intergenic	337732	NM_026582	68151	Mm.6766	NM_026582		Wls	5031439A09Rik|AI173978|AI987742|Gpr177	wntless homolog (Drosophila)	protein-coding
common_peak1-13151-61-37-1.13482181630576-4.22982540731974	chr19	10289703	10291509	+	0	NA	exon (NM_001033481, exon 17 of 26)	exon (NM_001033481, exon 17 of 26)	10083	NM_001163431	69038	Mm.375100	NM_026919	ENSMUSG00000036372	Tmem258	1810006K21Rik	transmembrane protein 258	protein-coding
common_peak1-7924-51-45-0.55136186954556-1.24554587181539	chr1	143701964	143703837	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-1149921	NR_040604	75910	Mm.483845	NR_040604		4930590L20Rik	-	RIKEN cDNA 4930590L20 gene	ncRNA
common_peak1-16211-28-55--0.754395802236141-1.50810240303318	chr5	96800197	96801088	+	0	NA	Intergenic	Intergenic	-2332	NM_175473	231470	Mm.291120	NM_175473	ENSMUSG00000034687	Fras1	E130113P14Rik|bl|mKIAA1500	Fraser syndrome 1 homolog (human)	protein-coding
common_peak1-18004-12-11-0.0638134843664826-0.337263207250336	chr7	140057824	140058406	+	0	NA	intron (NM_198017, intron 2 of 8)	intron (NM_198017, intron 2 of 8)	7207	NM_198017	109359	Mm.274824	NM_198017	ENSMUSG00000030965	Fam175b	AA589499|AI853413|Abro1|C430003P19Rik	family with sequence similarity 175, member B	protein-coding
common_peak2-27334-76-138--0.356996686860226-1.0420936684285	chr3	69126129	69127887	+	0	NA	intron (NM_178726, intron 1 of 3)	intron (NM_178726, intron 1 of 3)	6168	NM_178726	242083	Mm.40577	NM_178726		Ppm1l	3222401G13|5930404J21Rik|AI481720|AW045850|PP2C|PP2Cepsilon|Pp2ce|Ppp2ce|mKIAA4175	protein phosphatase 1 (formerly 2C)-like	protein-coding
unique_peak1-1908-14-2-2.31425365963649-3.28500101358144	chr14	69734126	69734910	+	0	NA	Intergenic	L1Md_A|LINE|L1	-55341	NM_010920	18092	Mm.390691	NM_010920	ENSMUSG00000044186	Nkx2-6	AV044928|Nkx-2.6|Nkx2.6|Tix|tinman	NK2 homeobox 6	protein-coding
common_peak2-27054-43-51-0.082123467382611-0.333814721158537	chr2	180920162	180921185	+	0	NA	Intergenic	Intergenic	-1375	NM_025598	66496	Mm.213943	NM_025598	ENSMUSG00000016344	Ppdpf	0610012G23Rik|2610317A05Rik|2700038C09Rik|3110053G12Rik	pancreatic progenitor cell differentiation and proliferation factor homolog (zebrafish)RIKEN cDNA 2700038C09 gene	protein-coding
common_peak1-8061-132-132-0.663165756581675-4.28779232072461	chr1	173912083	173914799	+	0	NA	Intergenic	PB1D10|SINE|Alu	43958	NM_033509	93840	Mm.36148	NM_033509	ENSMUSG00000026556	Vangl2	C530001F03Rik|Lp|Lpp1|Ltap|Vang1l2|loop-tail|ska17|ska<m17Jus>|stbm|strabismus	vang-like 2 (van gogh, Drosophila)	protein-coding
common_peak1-17819-27-27-0.184191028837632-0.393151991482004	chr7	102440948	102442089	+	0	NA	Intergenic	Lx4A|LINE|L1	-917629	NM_011858	23966	Mm.254610	NM_011858	ENSMUSG00000048078	Tenm4	Doc4|ELM2|Odz4|R75022|Ten-m4|l(7)-3Rn|l7Rn3|mKIAA1302	teneurin transmembrane protein 4	protein-coding
common_peak2-26498-13-14--0.12841856497075-0.301029995663977	chr2	84636096	84636606	+	0	NA	Intergenic	Intergenic	-2634	NM_019949	56791	Mm.38261	NM_019949	ENSMUSG00000027078	Ube2l6	2810489I21Rik|RIG-B|UBCH8|Ubce8|Ubcm8	ubiquitin-conjugating enzyme E2L 6	protein-coding
common_peak2-20364-11-9-0.186765489364251-0.344532117358383	chr10	12918768	12919264	+	0	NA	Intergenic	RMER15|LTR|ERVL	-6073	NM_181470	353258	Mm.117581	NM_181470	ENSMUSG00000019814	Ltv1	2610020N02Rik	LTV1 homolog (S. cerevisiae)	protein-coding
common_peak2-22385-53-74--0.0878456780799519-0.31450906201653	chr13	31558283	31560458	+	0	NA	Intergenic	Intergenic	-90669	NM_008239	15220	Mm.44235	NM_008239	ENSMUSG00000038415	Foxq1	HFH-1|Hfh1|Hfh1l|sa	forkhead box Q1	protein-coding
common_peak1-13169-101-135-0.16655139548608-0.545479934150534	chr19	11911321	11913386	+	0	NA	Intergenic	PB1D10|SINE|Alu	-8839	NM_146936	258938	Mm.451671	NM_146936	ENSMUSG00000048292	Olfr1417	MOR266-2	olfactory receptor 1417	protein-coding
common_peak1-14023-38-23-0.986490158577374-2.25413655118513	chr2	113620658	113622490	+	0	NA	intron (NM_009162, intron 4 of 5)	intron (NM_009162, intron 4 of 5)	-22769	NM_011824	23892	Mm.166318	NM_011824		Grem1	Cktsf1b1|Drm|Grem|ld	gremlin 1	protein-coding
unique_peak2-33297-7-8--0.370834171144123-1.00793137938329	chr11	3398721	3399164	+	0	NA	intron (NM_172439, intron 9 of 12)	MER2|DNA|MER2_type	5882	NM_172439	170835	Mm.24313	NM_172439	ENSMUSG00000034570	Inpp5j	Pib5pa|Pipp	inositol polyphosphate 5-phosphatase J	protein-coding
unique_peak1-5943-8-2-1.42025991722641-1.65811743852845	chr6	90800721	90801225	+	0	NA	Intergenic	Intergenic	-40856	NM_001134384	232227	Mm.196943	NM_182784	ENSMUSG00000034312	Iqsec1	AW561907|BC026481|BRAG2|D6Ertd349e|cI-43	IQ motif and Sec7 domain 1	protein-coding
common_peak2-22007-11-8-0.338768582809301-1.14218153353838	chr12	56288218	56288747	+	0	NA	intron (NM_001100109, intron 15 of 15)	ID_B1|SINE|B4	-12097	NM_001100116	100101807	Mm.439875	NM_001100116		1700047I17Rik2	-	RIKEN cDNA 1700047I17 gene 2	protein-coding
common_peak2-26559-9-7-0.18961340640422-1.05908390183068	chr2	102142285	102142791	+	0	NA	3' UTR (NM_020267, exon 5 of 5)	3' UTR (NM_020267, exon 5 of 5)	98519	NM_020267	80985	Mm.315002	NM_020267	ENSMUSG00000027189	Trim44	Dipb|Mc7	tripartite motif-containing 44	protein-coding
unique_peak2-37263-4-10--1.48289213249054-1.5150158574804	chr4	108151394	108151999	+	0	NA	exon (NM_175472, exon 3 of 31)	exon (NM_175472, exon 3 of 31)	19665	NM_175472	230594	Mm.25181	NM_175472	ENSMUSG00000034610	Zcchc11	6030404K05Rik|9230115F04Rik|PPAPD3|mKIAA0191	zinc finger, CCHC domain containing 11	protein-coding
unique_peak1-1503-13-3-1.77847203063777-2.58603100924543	chr13	3675970	3676569	+	0	NA	Intergenic	Intergenic	42991	NM_001267724	142688	Mm.253061	NM_178283	ENSMUSG00000033781	Asb13	2210015B19Rik|6430573K02Rik|Asb-13|C85285	ankyrin repeat and SOCS box-containing 13	protein-coding
unique_peak2-39909-8-9--0.316705676939792-1.03275496310833	chrX	98266208	98266688	+	0	NA	Intergenic	RMER6A|LTR|ERVK	-11470	NM_001167997	83558	Mm.134024	NM_031384	ENSMUSG00000009670	Tex11	4930565P14Rik|BB024231|ZIP4H	testis expressed gene 11	protein-coding
unique_peak1-6482-6-1-1.5653981103803-1.56314192529759	chr7	112244120	112244580	+	0	NA	Intergenic	Intergenic	10118	NM_147044	259046	Mm.377805	NM_147044	ENSMUSG00000096029	Olfr679	MOR40-2	olfactory receptor 679	protein-coding
common_peak1-7944-15-14-0.105274154947137-0.330004445983672	chr1	153121184	153121843	+	0	NA	Intergenic	Intergenic	-70115	NM_001039512	117198	Mm.33764	NM_028582	ENSMUSG00000023150	Ivns1abp	1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850	influenza virus NS1A binding protein	protein-coding
unique_peak1-2236-20-8-1.31814978314888-1.77631109801764	chr15	76274296	76275233	+	0	NA	intron (NM_175457, intron 33 of 43)	B3A|SINE|B2	11120	NR_105919	102465576		NR_105919		Mir6954	mmu-mir-6954	microRNA mir-6954	ncRNA
common_peak2-23928-40-72--0.530848876128919-1.08340947933384	chr16	11065696	11067178	+	0	NA	promoter-TSS (NM_009223)	promoter-TSS (NM_009223)	46	NM_009223	20621	Mm.325800	NM_009223	ENSMUSG00000037972	Snn	2810407J07Rik|AI848521|AW547286	stannin	protein-coding
unique_peak2-34637-8-9--0.316705676939792-1.03275496310833	chr14	99367014	99367516	+	0	NA	Intergenic	L1Md_F2|LINE|L1	78090	NM_175245	76789	Mm.38912	NM_175245	ENSMUSG00000033186	Mzt1	2410129H14Rik|AI120158|Mozart1	mitotic spindle organizing protein 1	protein-coding
common_peak2-22368-14-12-0.198776442216552-0.373562084705529	chr13	29502393	29502939	+	0	NA	intron (NM_144536, intron 13 of 15)	intron (NM_144536, intron 13 of 15)	394542	NR_045075	77920	Mm.197051	NR_045073	ENSMUSG00000086363	A330102I10Rik	-	RIKEN cDNA A330102I10 gene	ncRNA
unique_peak2-36248-2-7--1.91745425626332-1.45399745587252	chr2	46451037	46451468	+	0	NA	Intergenic	L1Md_F2|LINE|L1	899127	NR_040497	69405	Mm.396184	NR_040497	ENSMUSG00000086202	1700019E08Rik	-	RIKEN cDNA 1700019E08 gene	ncRNA
common_peak2-28489-60-89--0.137561234709143-0.363270864008465	chr4	155704205	155706091	+	0	NA	Intergenic	Intergenic	-96182	NM_198305	231003	Mm.423038	NM_198305	ENSMUSG00000078484	Klhl17	AL022703|BC058738	kelch-like 17	protein-coding
common_peak2-22527-19-28--0.455293668465885-0.518921928796332	chr13	55321207	55322437	+	0	NA	intron (NM_008739, intron 2 of 22)	(CA)n|Simple_repeat|Simple_repeat	10679	NM_008739	18193	Mm.12964	NM_008739	ENSMUSG00000021488	Nsd1	AI528500|KMT3B	nuclear receptor-binding SET-domain protein 1	protein-coding
common_peak2-26023-61-72-0.192924770869323-0.470687517451348	chr19	59344561	59346393	+	0	NA	intron (NM_172523, intron 3 of 15)	B4A|SINE|B4	10109	NM_172523	214084	Mm.268797	NM_172523	ENSMUSG00000025094	Slc18a2	1110037L13Rik|9330105E13|Vmat2	solute carrier family 18 (vesicular monoamine), member 2	protein-coding
unique_peak2-39206-3-7--1.41398308995928-1.23214870625617	chr8	105851521	105852012	+	0	NA	Intergenic	Intergenic	19668	NR_036588	69794	Mm.396139	NR_036588		1600027J07Rik	-	RIKEN cDNA 1600027J07 gene	ncRNA
common_peak1-19369-21-11-0.984526764545079-1.3750876294627	chrX	19157365	19158377	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	-433774	NR_029807	723828		NR_029807	miRBase:MI0000710	Mir222	Mirn222|mmu-mir-222	microRNA 222	ncRNA
common_peak2-29902-17-15-0.218296338205038-0.403453972741633	chr6	113656128	113656844	+	0	NA	promoter-TSS (NR_106009)	promoter-TSS (NR_106009)	-716	NR_106009	102465631		NR_106009		Mir7042	mmu-mir-7042	microRNA mir-7042	ncRNA
unique_peak1-6468-9-0-3.18961340640422-3.01029995663981	chr7	107781022	107781544	+	0	NA	intron (NM_001163663, intron 5 of 7)	B2_Mm1a|SINE|B2	24196	NM_001163187	27276	Mm.491216	NM_013746	ENSMUSG00000030701	Plekhb1	AI315628|PHR1|Phret1|evt-1	pleckstrin homology domain containing, family B (evectins) member 1	protein-coding
common_peak1-8357-11-12--0.191746133889479-0.310474156842889	chr10	58497609	58498160	+	0	NA	intron (NM_172788, intron 3 of 9)	Lx9|LINE|L1	186711	NM_001024911	103080	Mm.346842	NM_001024910	ENSMUSG00000019917	Sept10	4921515A04Rik|9430099J10Rik|AA408298|AI874685	septin 10	protein-coding
common_peak2-32417-22-37--0.600643408356181-0.808568985218824	chrX	162759047	162760181	+	0	NA	intron (NM_023122, intron 1 of 6)	intron (NM_023122, intron 1 of 6)	-22871	NM_001177958	14758	Mm.222320	NM_023122	ENSMUSG00000031342	Gpm6b	AI593561|Gpm6|M6B	glycoprotein m6b	protein-coding
unique_peak1-7045-9-5-0.604650905683064-1.21398586181642	chr8	128383019	128383489	+	0	NA	intron (NM_175561, intron 12 of 33)	intron (NM_175561, intron 12 of 33)	38963	NM_175561	270109	Mm.145535	NM_175561	ENSMUSG00000060212	Pcnxl2	A830048P05|AU067631|E330039K12Rik|mKIAA0435	pecanex-like 2 (Drosophila)	protein-coding
common_peak2-31881-16-15-0.118263642268062-0.328191099940264	chr9	55937612	55938204	+	0	NA	5' UTR (NM_011193, exon 1 of 15)	5' UTR (NM_011193, exon 1 of 15)	125	NM_011193	19200	Mm.2534	NM_011193	ENSMUSG00000032322	Pstpip1	CD2BP1|def-2	proline-serine-threonine phosphatase-interacting protein 1	protein-coding
common_peak2-23622-10-8-0.186490343566457-1.078512453669	chr15	83100266	83100696	+	0	NA	Intergenic	MMVL30-int|LTR|ERV1	-18277	NM_001004150	239559	Mm.323805	NM_001004150	ENSMUSG00000047878	A4galt	-	alpha 1,4-galactosyltransferase	protein-coding
common_peak2-26478-88-90-0.507617768971836-1.81723637423224	chr2	78868182	78870150	+	0	NA	Intergenic	Intergenic	159962	NM_009454	22193	Mm.1485	NM_009454		Ube2e3	Ubce4|ubcM2	ubiquitin-conjugating enzyme E2E 3	protein-coding
common_peak2-26828-8-10--0.454209200689727-1.078512453669	chr2	152735330	152735876	+	0	NA	Intergenic	Intergenic	-1485	NM_001081044	228785	Mm.250604	NM_001081044	ENSMUSG00000027470	Mylk2	9830004H17Rik|BB138278	myosin, light polypeptide kinase 2, skeletal muscle	protein-coding
unique_peak2-34260-2-5--1.50241675698448-1.08602067057793	chr13	63916906	63917327	+	0	NA	intron (NM_001013608, intron 1 of 18)	intron (NM_001013608, intron 1 of 18)	474	NM_023507	76251	Mm.186610	NM_023507	ENSMUSG00000021470	Ercc6l2	0610007P08Rik|1700019D06Rik|9330134C04Rik|Rad26l|Sr278	excision repair cross-complementing rodent repair deficiency, complementation group 6 like 2	protein-coding
unique_peak1-4334-8-0-3.00522241794757-2.70926996097583	chr2	152814439	152814912	+	0	NA	intron (NM_001083618, intron 5 of 14)	intron (NM_001083618, intron 5 of 14)	26444	NM_178939	68559	Mm.12746	NM_178939	ENSMUSG00000027472	Pdrg1	1110004D19Rik|AU020945|AV006589|Pdrg	p53 and DNA damage regulated 1	protein-coding
common_peak2-22816-12-8-0.478850983645327-0.562038191119709	chr14	17917432	17917857	+	0	NA	Intergenic	(TTTC)n|Simple_repeat|Simple_repeat	-2799	NM_001289761	218772	Mm.259318	NM_011243	ENSMUSG00000017491	Rarb	A830025K23|Hap|Nr1b2	retinoic acid receptor, beta	protein-coding
common_peak2-20784-4-5--0.608423014574403-0.909929411522249	chr10	120476319	120476659	+	0	NA	intron (NM_011915, intron 2 of 9)	B4A|SINE|B4	5429	NM_011915	24117	Mm.32831	NM_011915	ENSMUSG00000020218	Wif1	AW107799|WIF-1	Wnt inhibitory factor 1	protein-coding
common_peak1-13528-22-24-0.00342791531268016-0.305461879681376	chr2	153632157	153633054	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	25990	NR_036629	100504221	Mm.246778	NM_177849	ENSMUSG00000044083	Efcab8	A630008I04|EG329541	EF-hand calcium binding domain 8	ncRNA
unique_peak2-33211-2-7--1.91745425626332-1.45399745587252	chr10	115820931	115821284	+	0	NA	3' UTR (NM_029928, exon 32 of 32)	3' UTR (NM_029928, exon 32 of 32)	-34070	NR_028107	67342	Mm.245800	NM_026098	ENSMUSG00000020164	Kcnmb4os1	1700058G18Rik	potassium large conductance calcium-activated channel, subfamily M, beta member 4, opposite strand 1	ncRNA
common_peak1-14540-35-24-0.78751406868778-1.48724131519612	chr3	30998642	30999898	+	0	NA	intron (NM_001039090, intron 2 of 6)	intron (NM_001039090, intron 2 of 6)	5290	NM_001039090	20482	Mm.15406	NM_011386	ENSMUSG00000027660	Skil	Skir|SnoN|sno	SKI-like	protein-coding
unique_peak2-36777-7-6--0.00826409175941478-0.97990265578305	chr3	69524772	69525157	+	0	NA	Intergenic	Intergenic	-1013	NM_133787	97112	Mm.21062	NM_133787	ENSMUSG00000027787	Nmd3	C87860	NMD3 homolog (S. cerevisiae)	protein-coding
unique_peak2-32947-2-4--1.23938235115068-0.931118710592187	chr10	40512305	40512637	+	0	NA	intron (NM_177793, intron 4 of 4)	intron (NM_177793, intron 4 of 4)	90478	NM_027879	71713	Mm.46063	NM_027879	ENSMUSG00000038446	Cdc40	1200003H23Rik|EHB3|PRP17	cell division cycle 40	protein-coding
common_peak1-9680-18-21--0.146512467408946-0.306326795069975	chr12	8921410	8922140	+	0	NA	Intergenic	(CAA)n|Simple_repeat|Simple_repeat	-6338	NM_008640	17775	Mm.30071	NM_008640	ENSMUSG00000020585	Laptm4a	AA286466|LAPTM4|MTP|Mtrp|mKIAA0108	lysosomal-associated protein transmembrane 4A	protein-coding
unique_peak2-38596-6-15--1.4346018896197-1.16633110333236	chr7	78895798	78896466	+	0	NA	Intergenic	(GA)n|Simple_repeat|Simple_repeat	555349	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding
common_peak1-7689-31-41--0.167078751965637-0.345592563585011	chr1	82316095	82317253	+	0	NA	intron (NM_029777, intron 1 of 6)	intron (NM_029777, intron 1 of 6)	3520	NM_029777	76867	Mm.226994	NM_029777	ENSMUSG00000026142	Rhbdd1	4930418P06Rik|RRP4|mRHBDD1	rhomboid domain containing 1	protein-coding
common_peak1-13694-51-94--0.494931782728375-1.28892327576413	chr2	30236747	30238515	+	0	NA	intron (NM_001242407, intron 13 of 15)	intron (NM_001242407, intron 13 of 15)	-10143	NM_020329	57170	Mm.285167	NM_020329	ENSMUSG00000026856	Dolpp1	0610011H20Rik|AB030189|LSFR2	dolichyl pyrophosphate phosphatase 1	protein-coding
unique_peak1-1901-13-3-1.77847203063777-2.58603100924543	chr14	66223348	66223935	+	0	NA	promoter-TSS (NM_001195674)	promoter-TSS (NM_001195674)	-463	NM_001195674	100503545	Mm.297364	NM_001195674	ENSMUSG00000061356	Nuggc	Gm600|SLIP-GC	nuclear GTPase, germinal center associated	protein-coding
common_peak2-27850-58-89--0.195903161439178-0.430360740609959	chr3	152395934	152397317	+	0	NA	intron (NM_025662, intron 3 of 10)	(ACCTG)n|Simple_repeat|Simple_repeat	19561	NM_025662	329777	Mm.331447	NM_025662	ENSMUSG00000039047	Pigk	3000001O05Rik	phosphatidylinositol glycan anchor biosynthesis, class K	protein-coding
common_peak1-13143-14-19--0.422711934529718-0.403453972741636	chr19	10041409	10042132	+	0	NA	Intergenic	Intergenic	-13320	NR_073181	14319	Mm.1776	NM_010239	ENSMUSG00000024661	Fth1	FHC|Fth|HFt|MFH	ferritin heavy chain 1	protein-coding
common_peak1-15208-37-33-0.43853023023548-0.767679714496325	chr4	66828791	66830377	+	0	NA	Intergenic	Intergenic	340739	NM_021297	21898	Mm.38049	NM_021297	ENSMUSG00000039005	Tlr4	Lps|Ly87|Ran/M1|Rasl2-8	toll-like receptor 4	protein-coding
unique_peak1-3803-12-0-3.64877598508764-4.21441993929574	chr19	60871914	60872474	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-5598	NM_010123	13669	Mm.2238	NM_010123	ENSMUSG00000024991	Eif3a	A830012B05Rik|Csma|Eif3|Eif3s10|mKIAA0139	eukaryotic translation initiation factor 3, subunit A	protein-coding
common_peak2-24930-130-178-0.208115305565605-0.775819386088857	chr17	88064131	88066388	+	0	NA	Intergenic	Intergenic	-6638	NM_008628	17685	Mm.4619	NM_008628	ENSMUSG00000024151	Msh2	AI788990	mutS homolog 2 (E. coli)	protein-coding
common_peak2-30695-6-6--0.241956811677302-0.947717972411649	chr7	110941367	110941770	+	0	NA	Intergenic	Intergenic	-1224	NM_013619	18368	Mm.377108	NM_013619	ENSMUSG00000047535	Olfr67	3'[b]1|3'beta1|MOR31-1	olfactory receptor 67	protein-coding
unique_peak2-32631-8-4-0.683294323060208-1.21878474469819	chr1	121567260	121567662	+	0	NA	intron (NM_019933, intron 25 of 26)	L1MA4|LINE|L1	-21884	NM_145506	226352	Mm.253156	NM_145506	ENSMUSG00000026383	Epb4.1l5	1700030C16Rik|AL022914|BE37|E230025E14Rik|Epb41l5|Lulu1|NBL5	erythrocyte protein band 4.1-like 5	protein-coding
common_peak2-24249-5-4--0.0263084308932156-0.909929411522249	chr16	91728318	91728610	+	0	NA	intron (NM_026994, intron 1 of 11)	intron (NM_026994, intron 1 of 11)	583	NM_026994	66609	Mm.109823	NM_026994	ENSMUSG00000058240	Cryzl1	2210407J23Rik|2410006O11Rik|QOH-1	crystallin, zeta (quinone reductase)-like 1	protein-coding
unique_peak2-34990-9-23--1.39534909431694-1.67711336403294	chr15	99498177	99499171	+	0	NA	Intergenic	B2_Mm1a|SINE|B2	-2475	NM_009597	11419	Mm.440107	NM_009597	ENSMUSG00000023017	Asic1	AI843610|ASIC|ASIC1a|Accn2|B530003N02Rik|BNaC2	acid-sensing (proton-gated) ion channel 1	protein-coding
common_peak2-24141-10-10--0.103016273628528-0.301029995663987	chr16	36874450	36875010	+	0	NA	5' UTR (NM_134111, exon 1 of 6)	5' UTR (NM_134111, exon 1 of 6)	182	NM_134111	106389	Mm.432078	NM_134111	ENSMUSG00000022838	Eaf2	AW048865|FESTA-L|FESTA-S|Festa|Traits|U19	ELL associated factor 2	protein-coding
common_peak1-11292-14-20--0.493101262421116-0.456667090758524	chr15	83411147	83411841	+	0	NA	intron (NM_183017, intron 9 of 13)	intron (NM_183017, intron 9 of 13)	14093	NM_183017	223723	Mm.46778	NM_183017	ENSMUSG00000016757	Ttll12	BC055368|D430005B17	tubulin tyrosine ligase-like family, member 12	protein-coding
common_peak2-20636-13-13--0.0288828914198356-0.309074325783021	chr10	80678273	80678986	+	0	NA	intron (NM_178662, intron 3 of 12)	intron (NM_178662, intron 3 of 12)	-13847	NM_027120	69564	Mm.437211	NM_027120	ENSMUSG00000004939	Nmrk2	2310015C21Rik|Itgb1bp3|Mibp	nicotinamide riboside kinase 2	protein-coding
unique_peak1-6218-18-1-3.31291915122835-4.8766546284749	chr7	127614470	127615359	+	0	NA	intron (NM_001278944, intron 11 of 29)	L1_Mus3|LINE|L1	49699	NM_001278944	233810		NM_001278943	ENSMUSG00000051900	Abca16	AY243472	ATP-binding cassette, sub-family A (ABC1), member 16	protein-coding
unique_peak2-35733-1-5--2.2120195109379-1.32905871926422	chr18	35706396	35706846	+	0	NA	Intergenic	Intergenic	-6443	NR_038073	100503380	Mm.482118	NR_038073	ENSMUSG00000097769	Snhg4	Gm17457	small nucleolar RNA host gene 4	ncRNA
common_peak1-7472-10-10--0.103016273628528-0.301029995663987	chr1	170884954	170885604	+	0	NA	Intergenic	L1_Rod|LINE|L1	464505	NR_105766	102465178		NR_105766	miRBase:MI0021876	Mir6348	mmu-mir-6348	microRNA mir-6348	ncRNA
unique_peak1-7012-12-5-1.06381348436648-1.78669045979184	chr8	123806001	123806534	+	0	NA	Intergenic	Intergenic	154682	NM_008024	14241	Mm.5111	NM_008024	ENSMUSG00000097084	Foxl1	FREAC7|Fkh6|fkh-6	forkhead box L1	protein-coding
common_peak2-28555-43-151--1.46536432791988-10.4020286698505	chr5	4757110	4759032	+	0	NA	5' UTR (NM_021457, exon 1 of 1)	5' UTR (NM_021457, exon 1 of 1)	145	NM_021457	14362	Mm.246003	NM_021457	ENSMUSG00000044674	Fzd1	AW227548|FZ-1|Fz1	frizzled homolog 1 (Drosophila)	protein-coding
common_peak1-18219-22-45--0.876277850969609-1.55933022783608	chr8	25101359	25102440	+	0	NA	intron (NM_177086, intron 5 of 6)	intron (NM_177086, intron 5 of 6)	321766	NM_177086	320158	Mm.121274	NM_177086	ENSMUSG00000037492	Zmat4	9630048M01Rik	zinc finger, matrin type 4	protein-coding
common_peak1-10177-24-19-0.471281807880354-0.677583764578261	chr13	40913785	40914573	+	0	NA	Intergenic	RLTR19-int|LTR|ERVK	-40958	NM_023887	14538	Mm.314757	NM_008105	ENSMUSG00000021360	Gcnt2	5330430K10Rik|IGnT|IGnTA|IGnTB|IGnTC	glucosaminyl (N-acetyl) transferase 2, I-branching enzyme	protein-coding
unique_peak2-38026-5-18--1.95230784944944-1.99473478107052	chr6	37441527	37442138	+	0	NA	Intergenic	Lx8|LINE|L1	-38341	NM_145364	208665	Mm.262635	NM_145364	ENSMUSG00000038641	Akr1d1	-	aldo-keto reductase family 1, member D1	protein-coding
unique_peak2-34600-3-6--1.22133801201688-1.08602067057793	chr14	70350679	70351108	+	0	NA	intron (NM_028560, intron 3 of 6)	MTD|LTR|MaLR	110679	NM_028526	73523	Mm.23509	NM_028526	ENSMUSG00000022085	Pebp4	PEBP-4	phosphatidylethanolamine binding protein 4	protein-coding
common_peak2-21894-18-22--0.210642804828661-0.321718508207525	chr12	3572045	3572776	+	0	NA	promoter-TSS (NM_007886)	promoter-TSS (NM_007886)	19	NR_027870	13528	Mm.286202	NM_007886	ENSMUSG00000071454	Dtnb	-	dystrobrevin, beta	protein-coding
unique_peak2-34154-0-14--4.74702152608273-3.64038867156802	chr13	27205971	27206225	+	0	NA	Intergenic	Intergenic	-7475	NM_172155	215028	Mm.458451	NM_172155	ENSMUSG00000062737	Prl3d2	PL-Ib|Plib	prolactin family 3, subfamily d, member 1	protein-coding
common_peak2-29311-14-29--1.00767443525087-1.28534286439185	chr5	146220909	146221719	+	0	NA	intron (NM_007820, intron 4 of 12)	L1_Mm|LINE|L1	9278	NM_007820	13114	Mm.378905	NM_007820	ENSMUSG00000038656	Cyp3a16	-	cytochrome P450, family 3, subfamily a, polypeptide 16	protein-coding
unique_peak2-34871-7-6--0.00826409175941478-0.97990265578305	chr15	77875649	77876079	+	0	NA	intron (NM_007583, intron 1 of 3)	intron (NM_007583, intron 1 of 3)	73846	NM_007583	12300	Mm.277338	NM_007583		Cacng2	AW060990|B230105C07Rik|B930041E13Rik|stargazer|stargazin|stg|wag|waggler	calcium channel, voltage-dependent, gamma subunit 2	protein-coding
unique_peak1-2689-11-6-0.701338662194009-1.32595962126035	chr16	76610991	76611520	+	0	NA	Intergenic	Intergenic	-237961	NM_173440	268903	Mm.74711	NM_173440	ENSMUSG00000048490	Nrip1	6030458L20Rik|8430438I05Rik|9630050P12|AA959574|AW456757|RIP140	nuclear receptor interacting protein 1	protein-coding
unique_peak2-35239-5-5--0.289342836727009-0.909929411522249	chr16	93445982	93446385	+	0	NA	intron (NR_040494, intron 1 of 2)	intron (NR_040494, intron 1 of 2)	12934	NR_040494	72264	Mm.396204	NR_040494		1700029J03Rik	-	RIKEN cDNA 1700029J03 gene	ncRNA
common_peak1-18079-34-31-0.382068527001266-0.662333595915619	chr8	61193809	61194789	+	0	NA	intron (NM_175032, intron 1 of 11)	intron (NM_175032, intron 1 of 11)	-14706	NM_001177534	100271928	Mm.484123	NM_001177534		Gm15881	OTTMUSG00000027193	predicted gene 15881	protein-coding
unique_peak1-6352-19-11-0.81772482594053-0.991115276827166	chr7	63896248	63897316	+	0	NA	Intergenic	Intergenic	401641	NM_021879	18431	Mm.137052	NM_021879	ENSMUSG00000030450	Oca2	D7H15S12|D7Icr28RN|D7Nic1|p	oculocutaneous albinism II	protein-coding
common_peak2-24597-111-198--0.21893082913348-0.730411831821381	chr17	32283440	32285215	+	0	NA	exon (NM_008716, exon 18 of 33)	exon (NM_008716, exon 18 of 33)	19470	NM_008716	18131	Mm.439741	NM_008716	ENSMUSG00000038146	Notch3	AW229011|N3|hpbk	notch 3	protein-coding
unique_peak1-2616-10-2-1.77145284428761-2.09384600808989	chr16	34925985	34926518	+	0	NA	intron (NM_139300, intron 16 of 31)	intron (NM_139300, intron 16 of 31)	13164	NR_040536	76649	Mm.420532	NR_040536		1700119H24Rik	-	RIKEN cDNA 1700119H24 gene	ncRNA
unique_peak1-279-11-2-1.92373108353046-2.32232533660526	chr1	106211077	106211687	+	0	NA	Intergenic	Intergenic	-454014	NM_011800	23836	Mm.103640	NM_011800	ENSMUSG00000050840	Cdh20	Cdh7	cadherin 20	protein-coding
common_peak1-8030-29-25-0.411850362474019-0.664636481544818	chr1	170853673	170854772	+	0	NA	Intergenic	Intergenic	433448	NR_105766	102465178		NR_105766	miRBase:MI0021876	Mir6348	mmu-mir-6348	microRNA mir-6348	ncRNA
unique_peak2-34736-6-5--0.0195643903408542-0.947717972411649	chr15	40657601	40658009	+	0	NA	intron (NM_011766, intron 3 of 7)	intron (NM_011766, intron 3 of 7)	171217	NM_011766	22762	Mm.39496	NM_011766	ENSMUSG00000022306	Zfpm2	B330005D23Rik|FOG-2|FOG2	zinc finger protein, multitype 2	protein-coding
unique_peak1-5165-10-1-2.35641534500877-2.57096726280955	chr5	25623263	25624011	+	0	NA	Intergenic	Intergenic	357793	NM_001004365	242894	Mm.150319	NM_001004365	ENSMUSG00000056367	Actr3b	9630005C02|ARP11|AW047569|Arp3b|Arp3beta	ARP3 actin-related protein 3B	protein-coding
common_peak1-8147-38-46-0.0168638076208927-0.31027100108714	chr1	191317277	191318561	+	0	NA	Intergenic	Intergenic	-91767	NM_001281848	16526	Mm.33304	NM_010607	ENSMUSG00000037624	Kcnk2	A430027H14Rik|AI848635|TREK-1	potassium channel, subfamily K, member 2	protein-coding
common_peak1-9842-21-23--0.0154732354549205-0.305650498375555	chr12	78226181	78227230	+	0	NA	Intergenic	MLT1B|LTR|MaLR	-112386	NM_001252614	53618	Mm.35628	NM_016893	ENSMUSG00000021065	Fut8	-	fucosyltransferase 8	protein-coding
unique_peak1-4954-8-1-2.00522241794757-2.05605744720049	chr4	97838584	97839037	+	0	NA	Intergenic	Intergenic	211146	NM_053157	94043	Mm.331719	NM_053157	ENSMUSG00000028563	Tm2d1	2310026L18Rik|AA990549|Bbp	TM2 domain containing 1	protein-coding
unique_peak1-571-12-5-1.06381348436648-1.78669045979184	chr10	96632648	96633349	+	0	NA	Intergenic	Intergenic	134596	NR_045358	75301	Mm.108650	NR_045358		4930556N09Rik	-	RIKEN cDNA 4930556N09 gene	ncRNA
common_peak2-23926-20-35--0.681850216851119-0.950553505527076	chr16	10992345	10993092	+	0	NA	intron (NM_019980, intron 1 of 3)	CpG	496	NM_019980	56722	Mm.294753	NM_019980	ENSMUSG00000022500	Litaf	3222402J11Rik|C85531|N4WBP3|TBX1	LPS-induced TN factor	protein-coding
common_peak1-11641-73-51-0.99195528828413-4.18977144472923	chr16	22161298	22163276	+	0	NA	intron (NM_183029, intron 1 of 15)	CpG	1085	NM_183029	319765	Mm.489442	NM_183029	ENSMUSG00000033581	Igf2bp2	C330012H03Rik|IMP-2|Imp2|Neilsen	insulin-like growth factor 2 mRNA binding protein 2	protein-coding
unique_peak2-36324-2-5--1.50241675698448-1.08602067057793	chr2	84798828	84799159	+	0	NA	TTS (NM_021398)	TTS (NM_021398)	-21625	NM_008920	19074	Mm.142727	NM_008920	ENSMUSG00000027073	Prg2	MBP|mMBP|mMBP-1	proteoglycan 2, bone marrow	protein-coding
unique_peak1-5159-6-0-2.5653981103803-2.10720996964787	chr5	24803231	24803702	+	0	NA	intron (NM_001081383, intron 43 of 58)	intron (NM_001081383, intron 43 of 58)	74755	NM_144908	231050	Mm.246718	NM_144908	ENSMUSG00000038072	Galnt11	A430075I06Rik|AI648252|E430002F06Rik	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11	protein-coding
common_peak1-18277-10-27--1.45093957704883-2.06249767704514	chr8	39005912	39006418	+	0	NA	intron (NM_145841, intron 2 of 7)	intron (NM_145841, intron 2 of 7)	309091	NR_029884	723860		NR_029884		Mir383	Mirn383|mmu-mir-383	microRNA 383	ncRNA
unique_peak2-39310-2-10--2.37688587490062-2.09384600808989	chr8	124332009	124332472	+	0	NA	intron (NM_145605, intron 5 of 11)	B1_Mur3|SINE|Alu	21229	NM_145605	234825	Mm.209329	NM_145605	ENSMUSG00000040263	Klhdc4	AA408426|AV352552|BC012312|G430025P05Rik	kelch domain containing 4	protein-coding
unique_peak2-32765-5-10--1.16381195464315-1.33892459842472	chr1	171438529	171438937	+	0	NA	intron (NM_023284, intron 10 of 13)	B3|SINE|B2	22862	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
unique_peak2-35776-1-12--3.32749672835784-3.1004765869889	chr18	46997758	46998283	+	0	NA	Intergenic	ORR1A1|LTR|MaLR	-11673	NM_029008	74574	Mm.26379	NM_029008	ENSMUSG00000024481	4833403I15Rik	Aqpep|Lvrn	RIKEN cDNA 4833403I15 gene	protein-coding
common_peak2-23773-45-79--0.461570069542491-1.00278553979691	chr15	98830581	98832257	+	0	NA	Intergenic	Intergenic	15023	NR_045991	75951	Mm.441657	NR_045991	ENSMUSG00000097587	4930578M01Rik	3010001K12Rik	RIKEN cDNA 4930578M01 gene	ncRNA
unique_peak1-5911-16-5-1.53330114154691-1.80287260729378	chr6	88842302	88843143	+	0	NA	intron (NM_008564, intron 4 of 15)	intron (NM_008564, intron 4 of 15)	6052	NM_008564	17216	Mm.16711	NM_008564	ENSMUSG00000002870	Mcm2	AA959861|AW476101|BM28|CDCL1|Mcmd2|mKIAA0030	minichromosome maintenance deficient 2 mitotin (S. cerevisiae)	protein-coding
common_peak2-29013-12-13--0.158578936969966-0.301029995663979	chr5	110869032	110869681	+	0	NA	intron (NM_001142642, intron 1 of 18)	intron (NM_001142642, intron 1 of 18)	8166	NM_001142642	381668	Mm.348782	NM_028596	ENSMUSG00000043323	Fbrsl1	2410025L10Rik|AI467568|Gm1049|mKIAA1545	fibrosin-like 1	protein-coding
common_peak2-31709-34-43--0.0773630916360313-0.30358472802154	chr9	78527580	78528719	+	0	NA	intron (NM_153098, intron 18 of 32)	intron (NM_153098, intron 18 of 32)	64796	NM_153098	235505	Mm.32955	NM_153098	ENSMUSG00000046186	Cd109	9930012E15Rik|AI480638|GARP	CD109 antigen	protein-coding
common_peak2-31188-25-21-0.402418286707809-0.580176690544129	chr8	53511660	53512297	+	0	NA	Intergenic	Intergenic	-1085078	NM_001205054	11593	Mm.334535	NM_001005847	ENSMUSG00000031521	Aga	AW060726	aspartylglucosaminidase	protein-coding
common_peak2-29985-7-5-0.214128329577033-1.01466476204226	chr6	121183636	121183974	+	0	NA	Intergenic	L1M2|LINE|L1	-12119	NM_011909	24110	Mm.326911	NM_011909	ENSMUSG00000030107	Usp18	1110058H21Rik|AW047653|UBP43|Ubp15	ubiquitin specific peptidase 18	protein-coding
common_peak1-10843-24-33--0.294252938482622-0.390124689062463	chr14	105897350	105898268	+	0	NA	promoter-TSS (NR_045921)	promoter-TSS (NR_045921)	-196	NR_045921	74864	Mm.159344	NR_045921	ENSMUSG00000022116	4930449E01Rik	-	RIKEN cDNA 4930449E01 gene	ncRNA
unique_peak2-34793-7-6--0.00826409175941478-0.97990265578305	chr15	64312952	64313349	+	0	NA	Intergenic	Intergenic	-98669	NM_010026	13196	Mm.277236	NM_010026	ENSMUSG00000022377	Asap1	AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19	ArfGAP with SH3 domain, ankyrin repeat and PH domain1	protein-coding
common_peak2-24687-56-101--0.436829516532252-1.13813320365872	chr17	44238340	44240475	+	0	NA	exon (NM_199016, exon 2 of 4)	exon (NM_199016, exon 2 of 4)	3350	NM_199016	224794	Mm.255971	NM_199016	ENSMUSG00000023961	Enpp4	4933413N07Rik|AA986363|AI195364|E-NPP 4|Gm90|mKIAA0879	ectonucleotide pyrophosphatase/phosphodiesterase 4	protein-coding
common_peak2-30154-35-41-0.0390528356837434-0.311371317671728	chr6	146642579	146643360	+	0	NA	Intergenic	IAPLTR2_Mm|LTR|ERVK	-30483	NM_172734	232533	Mm.322121	NM_172734	ENSMUSG00000001630	Stk38l	4930473A22Rik|B230328I19|Ndr2|Ndr54	serine/threonine kinase 38 like	protein-coding
unique_peak1-3026-8-5-0.420259917226415-1.10484139239135	chr18	35045346	35045852	+	0	NA	Intergenic	Intergenic	24738	NM_007913	13653	Mm.181959	NM_007913		Egr1	A530045N19Rik|ETR103|Egr-1|Krox-1|Krox-24|Krox24|NGF1-A|NGFI-A|NGFIA|TIS8|Zenk|Zfp-6|Zif268|egr	early growth response 1	protein-coding
common_peak1-19064-17-15-0.218296338205038-0.403453972741633	chr9	69443424	69444236	+	0	NA	Intergenic	(TTC)n|Simple_repeat|Simple_repeat	139079	NR_037296	100526560		NR_037296	miRBase:MI0014106	Mir3109	mmu-mir-3109	microRNA 3109	ncRNA
common_peak2-27263-17-9-0.896368243317676-1.09394599973099	chr3	57181228	57181783	+	0	NA	Intergenic	MERVL-int|LTR|ERVL	-47827	NM_145539	229302	Mm.26618	NM_145539	ENSMUSG00000027801	Tm4sf4	Iltmp	transmembrane 4 superfamily member 4	protein-coding
common_peak2-30514-37-27-0.718638149428215-1.38733277998641	chr7	65789831	65790877	+	0	NA	Intergenic	Intergenic	-123218	NM_009728	11982	Mm.135129	NM_009728	ENSMUSG00000025324	Atp10a	Atp10c|pfatp	ATPase, class V, type 10A	protein-coding
unique_peak1-1325-12-1-2.64877598508764-3.36932189928148	chr12	8184475	8185173	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-30089	NM_172401	68832	Mm.25608	NM_172401	ENSMUSG00000037669	1110057K04Rik	LDAH	RIKEN cDNA 1110057K04 gene	protein-coding
common_peak1-8993-142-171-0.419057505868522-2.19290199733198	chr11	59809263	59810650	+	0	NA	intron (NM_001290012, intron 2 of 6)	intron (NM_001290012, intron 2 of 6)	-31512	NM_009026	19416	Mm.3903	NM_009026	ENSMUSG00000049892	Rasd1	Dexras1	RAS, dexamethasone-induced 1	protein-coding
common_peak1-8705-119-178-0.0546221438657879-0.339212804612351	chr11	93993750	93997062	+	0	NA	Intergenic	Intergenic	-77362	NM_009427	22057	Mm.259673	NM_009427	ENSMUSG00000037573	Tob1	Tob|Trob	transducer of ErbB-2.1	protein-coding
common_peak2-22072-5-6--0.511735258063458-0.947717972411649	chr12	76318420	76318808	+	0	NA	Intergenic	Intergenic	-40295	NM_172805	238271	Mm.44465	NM_172805	ENSMUSG00000034402	Kcnh5	Eag2	potassium voltage-gated channel, subfamily H (eag-related), member 5	protein-coding
unique_peak2-33723-5-7--0.704380336005853-1.01466476204226	chr11	113779017	113779452	+	0	NA	intron (NM_172800, intron 2 of 44)	IAPEz-int|LTR|ERVK	148031	NM_172800	237979	Mm.130504	NM_172800	ENSMUSG00000041592	Sdk2	4632412F08Rik|5330435L01Rik|Sdk-2|mKIAA1514	sidekick homolog 2 (chicken)	protein-coding
common_peak2-26465-22-24-0.00342791531268016-0.305461879681376	chr2	75938356	75938942	+	0	NA	intron (NM_001081033, intron 10 of 19)	intron (NM_001081033, intron 10 of 19)	-118625	NM_030188	78802	Mm.282339	NM_030188	ENSMUSG00000075271	Ttc30a1	4930506L13Rik	tetratricopeptide repeat domain 30A1	protein-coding
common_peak1-13139-85-46-1.40081439644701-8.37096184170376	chr19	9978072	9979743	+	0	NA	Intergenic	Lx7|LINE|L1	-4884	NM_016692	16319	Mm.29755	NM_016692	ENSMUSG00000024660	Incenp	2700067E22Rik|AU019509|C130081E20|C77457	inner centromere protein	protein-coding
common_peak2-24618-27-34--0.137737066049731-0.314192449397093	chr17	33954821	33955753	+	0	NA	exon (NM_030697, exon 3 of 11)	exon (NM_030697, exon 3 of 11)	6156	NM_016844	54127	Mm.352374	NM_016844	ENSMUSG00000067288	Rps28	-	ribosomal protein S28	protein-coding
unique_peak1-5707-16-11-0.533301141546906-0.58239619684445	chr6	38380933	38381771	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	-2573	NM_177185	320538	Mm.302831	NM_177185	ENSMUSG00000038538	Ubn2	2900060J04Rik|6030408G03Rik|BC060116|D130059P03Rik|mKIAA2030	ubinuclein 2	protein-coding
unique_peak1-2163-7-5-0.214128329577033-1.01466476204226	chr15	60428646	60429068	+	0	NA	Intergenic	L1Md_F|LINE|L1	-225663	NR_030696	320469	Mm.230853	NM_177166	ENSMUSG00000097493	9930014A18Rik	-	RIKEN cDNA 9930014A18 gene	ncRNA
common_peak2-21422-9-13--0.617741515653384-0.459837087125828	chr11	84513647	84514169	+	0	NA	Intergenic	Intergenic	20026	NR_046197	78471	Mm.47152	NR_046197	ENSMUSG00000085044	1700109G15Rik	-	RIKEN cDNA 1700109G15 gene	ncRNA
unique_peak2-37084-4-9--1.34538860874061-1.36011389749466	chr3	152139952	152140444	+	0	NA	intron (NM_001081277, intron 12 of 13)	intron (NM_001081277, intron 12 of 13)	80550	NM_001287139	108946	Mm.379292	NM_198416	ENSMUSG00000039068	Zzz3	3110065C23Rik|6430567E01Rik|AA408566|AI481057|AW556059|R75514	zinc finger, ZZ domain containing 3	protein-coding
common_peak2-20966-5-9--1.02630843089322-1.21398586181642	chr11	20331484	20332030	+	0	NA	Intergenic	RLTR25B|LTR|ERVK	-99041	NM_018861	55963	Mm.6379	NM_018861	ENSMUSG00000020142	Slc1a4	ASCT-1|ASCT1|AW045657|SATT	solute carrier family 1 (glutamate/neutral amino acid transporter), member 4	protein-coding
common_peak1-18775-17-10-0.75886471956774-0.917676348953458	chr8	126908985	126909797	+	0	NA	intron (NM_171824, intron 1 of 6)	Tigger5|DNA|MER2_type	48445	NM_171824	209966	Mm.234233	NM_171824	ENSMUSG00000050751	Pgbd5	2900019M05Rik|AI854313	piggyBac transposable element derived 5	protein-coding
common_peak2-22581-13-25--0.921967687503323-0.983972868822056	chr13	67483745	67484498	+	0	NA	Intergenic	MuRRS4-int|LTR|ERV1	-7422	NM_001001186	408065	Mm.461583	NM_001001186	ENSMUSG00000078995	Zfp456	BC065418|Rslcan-13	zinc finger protein 456	protein-coding
unique_peak2-39739-3-8--1.58390809140159-1.39487600375387	chr9	123260255	123260705	+	0	NA	Intergenic	CT-rich|Low_complexity|Low_complexity	-15578	NM_153168	102436	Mm.276076	NM_153168	ENSMUSG00000035202	Lars2	AI035546|Kiaa0028|LEURS	leucyl-tRNA synthetase, mitochondrial	protein-coding
unique_peak2-33560-2-7--1.91745425626332-1.45399745587252	chr11	83891110	83891557	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-9474	NM_019819	56405	Mm.240885	NM_019819	ENSMUSG00000018648	Dusp14	1110014C10Rik|2310042C07Rik|D11Ertd395e|MKP-L|Mkp6	dual specificity phosphatase 14	protein-coding
unique_peak2-33587-4-10--1.48289213249054-1.5150158574804	chr11	87127069	87127555	+	0	NA	intron (NM_177167, intron 1 of 6)	intron (NM_177167, intron 1 of 6)	45184	NM_177167	320472	Mm.341988	NM_177167	ENSMUSG00000046442	Ppm1e	AW049266|B930008A12Rik|POPX1|PP2CH|mKIAA1072	protein phosphatase 1E (PP2C domain containing)	protein-coding
common_peak2-30061-10-8-0.186490343566457-1.078512453669	chr6	128549683	128550166	+	0	NA	Intergenic	MT2B|LTR|ERVL	-18300	NM_001001179	232400	Mm.259234	NM_001001179	ENSMUSG00000047228	BC048546	Ovos	cDNA sequence BC048546	protein-coding
unique_peak1-2186-12-4-1.32684789020028-2.04196296489515	chr15	63500593	63501281	+	0	NA	Intergenic	Intergenic	139357	NM_031378	83492	Mm.335619	NM_031378	ENSMUSG00000079025	Gsdmc	Gsdmc1|Mlze	gasdermin C	protein-coding
common_peak2-27647-24-14-0.886319307159198-1.33403699391683	chr3	107895742	107896375	+	0	NA	promoter-TSS (NM_008141)	promoter-TSS (NM_008141)	74	NM_008141	14686	Mm.439652	NM_008141	ENSMUSG00000009108	Gnat2	AW490837|Gnat-2|Gt-2|Tcalpha	guanine nucleotide binding protein, alpha transducing 2	protein-coding
common_peak2-26149-25-27-0.0544949832875021-0.316543811862083	chr2	14603690	14604724	+	0	NA	intron (NM_023116, intron 2 of 13)	Lx7|LINE|L1	-38062	NR_028497	625342	Mm.484784	NR_028497		Gm13315	OTTMUSG00000011384	lactate dehydrogenase A pseudogene	pseudo
unique_peak2-33769-7-4-0.477162735410827-1.09384600808989	chr11	118248988	118249278	+	0	NA	Intergenic	L1Md_F2|LINE|L1	14112	NM_011150	19039	Mm.3152	NM_011150	ENSMUSG00000033880	Lgals3bp	90K|CyCAP|MAC-2BP|Ppicap|Tango10b	lectin, galactoside-binding, soluble, 3 binding protein	protein-coding
common_peak2-29546-75-81-0.381514987125201-1.08434426040867	chr6	39724549	39725779	+	0	NA	Intergenic	Intergenic	35771	NM_010270	14548	Mm.377071	NM_010270	ENSMUSG00000029918	Mrps33	AI841153|CGI-139|Gdap3|MRP-S33|PTD003	mitochondrial ribosomal protein S33	protein-coding
unique_peak2-33466-4-5--0.608423014574403-0.909929411522249	chr11	69012144	69012453	+	0	NA	promoter-TSS (NM_009661)	promoter-TSS (NM_009661)	-953	NM_009661	11688	Mm.289672	NM_009661	ENSMUSG00000020891	Alox8	15-LOX-2|15-LOX-B|8-LOX|8S-LOX|Alox15b	arachidonate 8-lipoxygenase	protein-coding
unique_peak1-3705-8-1-2.00522241794757-2.05605744720049	chr19	43976380	43976819	+	0	NA	exon (NM_028029, exon 4 of 16)	exon (NM_028029, exon 4 of 16)	38089	NM_028029	71972	Mm.159024	NM_028029		Dnmbp	2410003L07Rik|2410003M15Rik|TUBA	dynamin binding protein	protein-coding
unique_peak1-6075-11-4-1.18676548936425-1.68134727924692	chr6	120162354	120162963	+	0	NA	intron (NM_198884, intron 14 of 19)	B3|SINE|B2	81919	NM_198884	330406	Mm.321840	NM_198884	ENSMUSG00000041372	B4galnt3	AB114826|B4GalNAcT3|C330047A21	beta-1,4-N-acetyl-galactosaminyl transferase 3	protein-coding
unique_peak1-1408-11-2-1.92373108353046-2.32232533660526	chr12	76534503	76535119	+	0	NA	Intergenic	Intergenic	-17043	NM_175644	217674	Mm.252250	NM_175644	ENSMUSG00000048982	Gphb5	Zlut1	glycoprotein hormone beta 5	protein-coding
unique_peak1-7151-12-1-2.64877598508764-3.36932189928148	chr9	57696239	57696908	+	0	NA	Intergenic	RMER4A|LTR|ERVK	-14532	NM_019689	56380	Mm.425588	NM_019689	ENSMUSG00000004661	Arid3b	Bdp|Dri2	AT rich interactive domain 3B (BRIGHT-like)	protein-coding
unique_peak2-36815-3-7--1.41398308995928-1.23214870625617	chr3	87173310	87173725	+	0	NA	intron (NM_009690, intron 5 of 5)	intron (NM_009690, intron 5 of 5)	-6792	NM_153090	229499	Mm.255203	NM_153090	ENSMUSG00000059994	Fcrl1	A230020G22Rik|Bxmas1|Bxmh1|Bxmh1b|Fcrh1|Fcrh1l|Fcrh1s|Ifgp1	Fc receptor-like 1	protein-coding
unique_peak1-326-17-8-1.04837133676273-1.30305656033811	chr1	133057989	133058813	+	0	NA	intron (NM_001136070, intron 7 of 14)	intron (NM_001136070, intron 7 of 14)	8617	NM_010709	16865	Mm.276294	NM_010709	ENSMUSG00000026427	Eif2d	D1Ertd5e|Lgtn	eukaryotic translation initiation factor 2D	protein-coding
common_peak2-31327-17-16-0.130833496954699-0.356936432242225	chr8	82402468	82403194	+	0	NA	Intergenic	Lx6|LINE|L1	167112	NM_026904	68999	Mm.257445	NM_026904	ENSMUSG00000036977	Anapc10	1500026N15Rik|A830003M23Rik|APC10	anaphase promoting complex subunit 10	protein-coding
common_peak1-9268-45-15-1.86035802534487-6.17384340282692	chr11	87422210	87423135	+	0	NA	intron (NM_133215, intron 15 of 18)	L2c|LINE|L2	-7994	NM_001045527	327992	Mm.390371	NM_001045527	ENSMUSG00000070345	Hsf5	Gm739|MLZ-220	heat shock transcription factor family member 5	protein-coding
unique_peak1-386-21-1-3.56948926526624-6.00334947154112	chr1	153136462	153137372	+	0	NA	Intergenic	Intergenic	-54711	NM_001039512	117198	Mm.33764	NM_028582	ENSMUSG00000023150	Ivns1abp	1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850	influenza virus NS1A binding protein	protein-coding
common_peak2-27777-75-132--0.316215443757905-0.869923764240088	chr3	133542997	133545235	+	0	NA	Intergenic	Intergenic	-336762	NM_001040400	214133	Mm.347816	NM_145989	ENSMUSG00000040943	Tet2	Ayu17-449|E130014J05Rik|mKIAA1546	tet methylcytosine dioxygenase 2	protein-coding
common_peak2-20585-15-7-1.01216475055566-1.08658567012551	chr10	78297762	78298185	+	0	NA	Intergenic	ORR1E|LTR|MaLR	12685	NM_146308	258305	Mm.377425	NM_146308	ENSMUSG00000051190	Olfr1356	MOR142-1|MOR142-2_p	olfactory receptor 1356	protein-coding
common_peak1-16448-37-66--0.540096118971953-1.0807309740853	chr5	135393699	135394673	+	0	NA	Intergenic	Intergenic	-2786	NM_020504	57255	Mm.86652	NM_020504	ENSMUSG00000008843	Cldn13	2500004B14Rik	claudin 13	protein-coding
common_peak2-28540-24-23-0.208247402046561-0.407645899519042	chr5	3300523	3301628	+	0	NA	Intergenic	Intergenic	-43237	NM_009873	12571	Mm.31672	NM_009873	ENSMUSG00000040274	Cdk6	5830411I20|AI504062|Crk2	cyclin-dependent kinase 6	protein-coding
unique_peak1-2837-15-6-1.20480982849805-1.32521814697968	chr17	28289692	28290393	+	0	NA	intron (NM_001004366, intron 2 of 21)	intron (NM_001004366, intron 2 of 21)	10571	NM_001004366	268935	Mm.258491	NM_001004366	ENSMUSG00000038677	Scube3	CEGF3|D030038I21Rik	signal peptide, CUB domain, EGF-like 3	protein-coding
common_peak1-14178-7-8--0.370834171144123-1.00793137938329	chr2	143988694	143989123	+	0	NA	Intergenic	Intergenic	26118	NM_001033778	433481	Mm.330630	NM_001033778		Gm5535	EG433481	predicted gene 5535	protein-coding
unique_peak1-3620-18-10-0.853487532591054-1.03889213727317	chr19	36083460	36084304	+	0	NA	intron (NM_008315, intron 1 of 2)	intron (NM_008315, intron 1 of 2)	47968	NM_008315	15566	Mm.254266	NM_008315	ENSMUSG00000024798	Htr7	5-HT7	5-hydroxytryptamine (serotonin) receptor 7	protein-coding
unique_peak1-5565-9-1-2.18961340640422-2.31132995230379	chr5	146909610	146910130	+	0	NA	exon (NM_001105160, exon 8 of 13)	exon (NM_001105160, exon 8 of 13)	19036	NM_001105160	100041449	Mm.301900	NM_001105160	ENSMUSG00000061292	Cyp3a59	ENSMUSG00000061292	cytochrome P450, family 3, subfamily a, polypeptide 59	protein-coding
common_peak2-27071-15-10-0.552733131918359-0.604422558181019	chr3	89390785	89391292	+	0	NA	intron (NM_080466, intron 2 of 7)	intron (NM_080466, intron 2 of 7)	66952	NM_080466	140493	Mm.120250	NM_080466		Kcnn3	KCa2.3|SK3|SKCA3	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	protein-coding
common_peak1-18013-9-8-0.0196884049619079-1.03275496310833	chr7	141339068	141339549	+	0	NA	intron (NM_007400, intron 2 of 22)	intron (NM_007400, intron 2 of 22)	77472	NM_007400	11489	Mm.439714	NM_007400	ENSMUSG00000054555	Adam12	Mltna|mKIAA4001	a disintegrin and metallopeptidase domain 12 (meltrin alpha)	protein-coding
common_peak1-18359-19-12-0.702247608520594-0.840839978588874	chr8	70001098	70001835	+	0	NA	Intergenic	Intergenic	-13191	NM_008673	17960	Mm.14125	NM_008673	ENSMUSG00000025588	Nat1	Nat-1	N-acetyl transferase 1	protein-coding
common_peak2-22208-17-25--0.482143379936054-0.479250674391597	chr12	111712646	111713332	+	0	NA	intron (NM_001135001, intron 3 of 13)	intron (NM_001135001, intron 3 of 13)	-10960	NM_001081457	26931	Mm.240396	NM_012023	ENSMUSG00000017843	Ppp2r5c	2610043M05Rik|2700063L20Rik|AI060890|AW545884|C85228|D12Bwg0916e|mKIAA0044	protein phosphatase 2, regulatory subunit B', gamma	protein-coding
unique_peak1-1579-9-4-0.867685311516858-1.36011389749466	chr13	32428261	32428770	+	0	NA	intron (NM_146041, intron 1 of 10)	intron (NM_146041, intron 1 of 10)	1898	NM_146041	218138	Mm.247143	NM_146041	ENSMUSG00000038372	Gmds	BC031788|C87208	GDP-mannose 4, 6-dehydratase	protein-coding
unique_peak2-34058-7-9--0.522837264589173-1.05908390183068	chr12	118846635	118847099	+	0	NA	intron (NM_175930, intron 8 of 27)	RMER10A|LTR|ERVL	91915	NM_175930	217944	Mm.227642	NM_175930	ENSMUSG00000041992	Rapgef5	4932413M22|C86120|D030051B22Rik|GFR|Mrgef|mKIAA0277|mmr-gef	Rap guanine nucleotide exchange factor (GEF) 5	protein-coding
common_peak1-17912-10-7-0.356415345008769-1.12966497611638	chr7	125491798	125492319	+	0	NA	Intergenic	(TCC)n|Simple_repeat|Simple_repeat	95008	NM_138649	110058	Mm.156558	NM_138649	ENSMUSG00000058420	Syt17	Bk	synaptotagmin XVII	protein-coding
unique_peak1-3394-10-5-0.771452844287613-1.33892459842472	chr19	4216934	4217318	+	0	NA	intron (NM_019952, intron 1 of 2)	intron (NM_019952, intron 1 of 2)	2734	NM_019952	56708	Mm.347919	NM_019952		Clcf1	Bsf3|CLC	cardiotrophin-like cytokine factor 1	protein-coding
unique_peak1-3521-48-1-4.97092715123481-17.3298859987657	chr19	17926596	17927925	+	0	NA	Intergenic	Intergenic	-15138	NM_001190483	18552	Mm.3401	NM_001163144	ENSMUSG00000024713	Pcsk5	PC5|PC5/6A|PC5A|PC6|SPC6|b2b1549Clo|b2b585Clo	proprotein convertase subtilisin/kexin type 5	protein-coding
common_peak2-20397-13-26--0.9764154715257-1.09492971584134	chr10	21295944	21296583	+	0	NA	Intergenic	Intergenic	-16688	NR_027968	67692	Mm.54306	NM_183266		1700020N01Rik	-	RIKEN cDNA 1700020N01 gene	ncRNA
unique_peak1-4293-21-1-3.56948926526624-6.00334947154112	chr2	144230292	144231153	+	0	NA	intron (NM_001166640, intron 10 of 10)	intron (NM_001166640, intron 10 of 10)	35951	NM_181417	228714	Mm.227925	NM_181417	ENSMUSG00000027425	Csrp2bp	2510008M08Rik|ATAC2|AU023459|D2Ertd473e|D2Wsu131e|E430020F17	cysteine and glycine-rich protein 2 binding protein	protein-coding
common_peak2-27724-17-13-0.410941416147434-0.546772548767014	chr3	123052631	123053231	+	0	NA	exon (NM_027135, exon 14 of 23)	exon (NM_027135, exon 14 of 23)	35977	NM_201638	210529	Mm.260039	NM_201638	ENSMUSG00000028114	Mettl14	G430022H21Rik|mKIAA1627	methyltransferase like 14	protein-coding
unique_peak2-38070-2-6--1.72480917832092-1.26211192963361	chr6	48838586	48838952	+	0	NA	Intergenic	Intergenic	-6485	NM_029638	76507	Mm.213898	NM_029638	ENSMUSG00000029811	Aoc1	1600012D06Rik|Abp1|DAO	amine oxidase, copper-containing 1	protein-coding
common_peak1-15778-11-8-0.338768582809301-1.14218153353838	chr4	155151227	155151756	+	0	NA	Intergenic	Intergenic	-2821	NM_147776	246228	Mm.26515	NM_147776	ENSMUSG00000042116	Vwa1	4932416A11Rik|WARP	von Willebrand factor A domain containing 1	protein-coding
unique_peak1-4814-7-5-0.214128329577033-1.01466476204226	chr3	143157165	143157560	+	0	NA	Intergenic	Intergenic	217745	NR_040405	621809	Mm.360134	NR_040405		Gm6260	EG621809	predicted gene 6260	ncRNA
unique_peak2-38414-1-10--3.08648862885404-2.57096726280955	chr7	24387459	24387935	+	0	NA	Intergenic	MERVK26-int|LTR|ERVK	-3497	NM_001166722	546944	Mm.480274	NM_001166722	ENSMUSG00000094187	Vmn1r170	EG546944|Gm5999	vomeronasal 1 receptor 170	protein-coding
common_peak1-15690-35-43--0.0280613601747932-0.301029995663985	chr4	139192856	139193841	+	0	NA	intron (NM_175438, intron 7 of 14)	intron (NM_175438, intron 7 of 14)	-6609	NR_105987	102465617		NR_105987		Mir7020	mmu-mir-7020	microRNA mir-7020	ncRNA
common_peak1-13962-30-15-1.16967540949187-2.23573970698983	chr2	92182754	92183944	+	0	NA	intron (NM_138755, intron 9 of 17)	(CAAAAA)n|Simple_repeat|Simple_repeat	27865	NM_001290774	228366	Mm.31158	NM_172670	ENSMUSG00000040434	Gyltl1b	5730485C17Rik|AI891893|Large2|Largel|mKIAA4105	glycosyltransferase-like 1B	protein-coding
common_peak1-13932-10-7-0.356415345008769-1.12966497611638	chr2	85089317	85089808	+	0	NA	Intergenic	Intergenic	-52706	NM_001033346	241528	Mm.291095	NM_001033346	ENSMUSG00000075224	Lrrc55	A330097E02Rik|Gm351	leucine rich repeat containing 55	protein-coding
unique_peak1-4614-12-6-0.841421063030034-1.58711810488664	chr3	68676688	68677469	+	0	NA	TTS (NM_001167996)	TTS (NM_001167996)	3570	NM_001167996	68725	Mm.45741	NM_001167996	ENSMUSG00000046999	1110032F04Rik	AI115547	RIKEN cDNA 1110032F04 gene	protein-coding
unique_peak2-33174-1-6--2.43441193227435-1.56314192529759	chr10	95416405	95416821	+	0	NA	intron (NM_001001932, intron 1 of 28)	RSINE1|SINE|B4	13316	NM_001001932	216238	Mm.210035	NM_001001932	ENSMUSG00000036499	Eea1	A430109M19Rik|B230358H09Rik|ZFYVE2	early endosome antigen 1	protein-coding
common_peak2-22240-58-122--0.646564570448743-2.31409113687013	chr13	34651429	34653598	+	0	NA	Intergenic	RMER19B|LTR|ERVK	92037	NM_025831	66895	Mm.28943	NM_025831	ENSMUSG00000021411	Pxdc1	1300014I06Rik	PX domain containing 1	protein-coding
unique_peak2-33322-4-8--1.19338551529556-1.21878474469819	chr11	12230953	12231472	+	0	NA	intron (NM_172496, intron 7 of 14)	intron (NM_172496, intron 7 of 14)	80931	NM_001282994	12808	Mm.22847	NM_172496	ENSMUSG00000020173	Cobl	-	cordon-bleu WH2 repeat	protein-coding
unique_peak2-38664-6-5--0.0195643903408542-0.947717972411649	chr7	98309689	98309932	+	0	NA	intron (NM_011807, intron 1 of 22)	intron (NM_011807, intron 1 of 22)	70514	NM_011807	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
unique_peak1-3885-19-3-2.40268732666169-3.59864904409227	chr2	14425484	14426252	+	0	NA	Intergenic	Intergenic	-100065	NM_023116	12296	Mm.313930	NM_023116	ENSMUSG00000057914	Cacnb2	AW060387|CAB2|Cavbeta2|Cchb2	calcium channel, voltage-dependent, beta 2 subunit	protein-coding
common_peak1-16946-40-29-0.752085087142579-1.63185160949148	chr6	84225388	84226956	+	0	NA	Intergenic	Intergenic	147660	NR_046063	100038556	Mm.387783	NR_046063		Gm10445	ENSMUSG00000072956	predicted gene 10445	ncRNA
common_peak2-19660-18-19--0.00900894365901106-0.306598483909153	chr1	52817079	52817886	+	0	NA	Intergenic	L1MB2|LINE|L1	-33320	NM_133829	98682	Mm.491173	NM_133829	ENSMUSG00000041439	Mfsd6	2210010L05Rik|9630025I22Rik|AI836200|AW212394|MMR2	major facilitator superfamily domain containing 6	protein-coding
common_peak1-9133-21-29--0.337401330342283-0.403610417161439	chr11	75563760	75564502	+	0	NA	intron (NM_009536, intron 1 of 5)	intron (NM_009536, intron 1 of 5)	17742	NM_009536	22627	Mm.234700	NM_009536	ENSMUSG00000020849	Ywhae	AU019196	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide	protein-coding
common_peak1-18799-14-13-0.0918612383000403-0.332077462497413	chr9	59653648	59654269	+	0	NA	intron (NM_173018, intron 8 of 43)	RMER17C|LTR|ERVK	54977	NM_173018	270163	Mm.249545	NM_173018	ENSMUSG00000039585	Myo9a	4732465J09Rik|C130068I12Rik|C230003M11	myosin IXa	protein-coding
common_peak1-17364-47-25-1.23440170662546-3.67636296827729	chr7	45677246	45678712	+	0	NA	Intergenic	Intergenic	841925	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak1-16507-47-49-0.290985234991823-0.585862008351098	chr5	139791299	139792649	+	0	NA	intron (NM_172723, intron 1 of 10)	(TG)n|Simple_repeat|Simple_repeat	9444	NM_172723	231821	Mm.297819	NM_172723	ENSMUSG00000056413	Adap1	4930431P11Rik|Centa1|GC1L|p42IP4	ArfGAP with dual PH domains 1	protein-coding
common_peak1-11656-25-10-1.40241828670781-2.39922209159552	chr16	24205607	24206575	+	0	NA	Intergenic	Intergenic	-187345	NM_178665	210126	Mm.209385	NM_178665	ENSMUSG00000033306	Lpp	9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16	LIM domain containing preferred translocation partner in lipoma	protein-coding
unique_peak1-2463-9-1-2.18961340640422-2.31132995230379	chr16	85720883	85721369	+	0	NA	Intergenic	Intergenic	82234	NM_009621	11504	Mm.1421	NM_009621	ENSMUSG00000022893	Adamts1	ADAM-TS1|ADAMTS|ADAMTS-1|C3-C5|METH-1|METH1	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 1	protein-coding
common_peak1-11511-50-50-0.368514974507457-0.781782704927518	chr16	20725204	20726675	+	0	NA	exon (NM_001173505, exon 6 of 6)	exon (NM_001173505, exon 6 of 6)	4732	NM_001289896	21832	Mm.3943	NM_009379	ENSMUSG00000022847	Thpo	Mgdf|Ml|Mpllg|Tpo	thrombopoietin	protein-coding
unique_peak2-32558-1-6--2.43441193227435-1.56314192529759	chr1	75231022	75231452	+	0	NA	Intergenic	Intergenic	-1761	NM_020266	56812	Mm.489660	NM_020266		Dnajb2	2700059H22Rik|Dnajb10|Hsj1|mDj8	DnaJ (Hsp40) homolog, subfamily B, member 2	protein-coding
common_peak2-31670-13-8-0.608547029195456-0.660903317613904	chr8	126824437	126824839	+	0	NA	intron (NM_139272, intron 2 of 15)	intron (NM_139272, intron 2 of 15)	69344	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
unique_peak1-4905-7-5-0.214128329577033-1.01466476204226	chr4	45516204	45516683	+	0	NA	intron (NM_001033306, intron 1 of 5)	intron (NM_001033306, intron 1 of 5)	27257	NM_001033306	230126	Mm.251716	NM_001033306	ENSMUSG00000044813	Shb	BC028832	src homology 2 domain-containing transforming protein B	protein-coding
common_peak2-20842-21-46--0.985099586411402-1.82819694957564	chr11	49250290	49251237	+	0	NA	Intergenic	Intergenic	-6592	NM_146467	258459	Mm.377513	NM_146467	ENSMUSG00000047702	Olfr1388	MOR256-28	olfactory receptor 1388	protein-coding
unique_peak1-6884-14-1-2.89921616035764-3.91338994363176	chr8	93030365	93031153	+	0	NA	Intergenic	MIRb|SINE|MIR	-158608	NM_172913	244579	Mm.302755	NM_172913	ENSMUSG00000043668	Tox3	500-9|BC052044|C230068E13|CAGF9|Tnrc9	TOX high mobility group box family member 3	protein-coding
common_peak2-29064-11-15--0.491306415748387-0.435191258261915	chr5	117279184	117279828	+	0	NA	Intergenic	Intergenic	-237680	NM_026886	68955	Mm.146779	NM_026886	ENSMUSG00000063919	Srrm4	1500001A10Rik|B230202K19Rik|bv|mKIAA1853|nSR100	serine/arginine repetitive matrix 4	protein-coding
common_peak1-15588-15-9-0.690236655668294-0.732381977911291	chr4	129513711	129514352	+	0	NA	intron (NM_001164745, intron 1 of 5)	B1_Mus1|SINE|Alu	16079	NM_001164745	19244	Mm.193688	NM_008974	ENSMUSG00000028788	Ptp4a2	Prl-2	protein tyrosine phosphatase 4a2	protein-coding
common_peak2-19688-22-28--0.210696890040167-0.337923771396236	chr1	58761554	58762412	+	0	NA	Intergenic	RLTR10-int|LTR|ERVK	-6352	NM_001289704	12633	Mm.336848	NM_009805	ENSMUSG00000026031	Cflar	2310024N18Rik|A430105C05Rik|CLARP|Cash|Casper|ENSMUSG00000072980|FLAME|FLAME-1|Flip|Gm9845|I-FLICE|MRIT|c-Flip	CASP8 and FADD-like apoptosis regulator	protein-coding
unique_peak1-4211-12-0-3.64877598508764-4.21441993929574	chr2	119318523	119319100	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	-15446	NM_026574	68142	Mm.330496	NM_026574	ENSMUSG00000034154	Ino80	2310079N15Rik|4632409L19Rik|Inoc1	INO80 homolog (S. cerevisiae)	protein-coding
common_peak1-18582-10-8-0.186490343566457-1.078512453669	chr8	106136651	106137188	+	0	NA	intron (NR_045730, intron 1 of 4)	intron (NR_045730, intron 1 of 4)	9220	NR_045730	71058	Mm.67707	NR_045730		4933400L20Rik	-	RIKEN cDNA 4933400L20 gene	ncRNA
unique_peak1-2747-27-7-1.99154595089524-4.07016573886257	chr17	45694523	45695729	+	0	NA	intron (NM_008690, intron 1 of 5)	intron (NM_008690, intron 1 of 5)	2461	NM_008690	18037	Mm.57043	NM_008690	ENSMUSG00000023947	Nfkbie	IKBE	nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, epsilon	protein-coding
common_peak1-12506-35-75--0.816557254981081-2.20923096619066	chr17	94749015	94750259	+	0	NA	Intergenic	L1_Mus1|LINE|L1	399595	NM_176917	76781	Mm.139146	NM_176917	ENSMUSG00000055660	Mettl4	2410198H06Rik|A730091E08Rik|AV296509|HsT661	methyltransferase like 4	protein-coding
common_peak2-21805-35-39-0.109442163575141-0.343417008601348	chr11	118408248	118409740	+	0	NA	intron (NM_001285436, intron 3 of 13)	intron (NM_001285436, intron 3 of 13)	70720	NM_172573	217364	Mm.473963	NM_172573	ENSMUSG00000033857	Engase	C130099A03|D230014K01Rik	endo-beta-N-acetylglucosaminidase	protein-coding
common_peak1-13267-133-177-0.25582415371691-1.0236552427728	chr19	36128340	36130582	+	0	NA	intron (NM_008315, intron 1 of 2)	intron (NM_008315, intron 1 of 2)	2389	NM_008315	15566	Mm.254266	NM_008315	ENSMUSG00000024798	Htr7	5-HT7	5-hydroxytryptamine (serotonin) receptor 7	protein-coding
unique_peak1-6265-10-0-3.35641534500877-3.31132995230379	chr7	24588049	24588692	+	0	NA	Intergenic	L1_Mm|LINE|L1	5849	NM_001166727	622222	Mm.480269	NM_001166727	ENSMUSG00000095632	Vmn1r175	EG622222|Gm6299	vomeronasal 1 receptor 175	protein-coding
unique_peak2-36422-7-6--0.00826409175941478-0.97990265578305	chr2	128544126	128544586	+	0	NA	intron (NM_008587, intron 1 of 18)	intron (NM_008587, intron 1 of 18)	19623	NM_008587	17289	Mm.239655	NM_008587	ENSMUSG00000014361	Mertk	Eyk|Mer|Nyk|nmf12	c-mer proto-oncogene tyrosine kinase	protein-coding
common_peak2-31710-32-23-0.694129518498504-1.20786488037717	chr9	79216160	79216913	+	0	NA	Intergenic	RSINE1|SINE|B4	150573	NR_045336	100038575	Mm.367838	NR_045336		Gm10635	ENSMUSG00000074174	predicted gene 10635	ncRNA
common_peak1-15499-9-9--0.132314688483142-1.03275496310833	chr4	115279666	115280205	+	0	NA	intron (NM_001100181, intron 4 of 12)	ORR1B2|LTR|MaLR	6392	NM_001100181	100040843	Mm.482683	NM_001100181	ENSMUSG00000063929	Cyp4a32	OTTMUSG00000008689	cytochrome P450, family 4, subfamily a, polypeptide 32	protein-coding
common_peak1-15476-12-22--0.874785970969374-0.809260849721102	chr4	107879691	107880358	+	0	NA	intron (NM_001167936, intron 2 of 13)	PB1|SINE|Alu	10503	NM_001167936	230590	Mm.301798	NM_001167936	ENSMUSG00000034645	Zyg11a	BC022150	zyg-11 family member A, cell cycle regulator	protein-coding
unique_peak2-35383-8-7-0.00522241794757061-1.00793137938329	chr17	29444924	29445381	+	0	NA	Intergenic	Intergenic	-10675	NM_023734	74116	Mm.30950	NM_023734	ENSMUSG00000024011	Pi16	1200009H11Rik|Cripi|PI-16	peptidase inhibitor 16	protein-coding
common_peak1-10340-16-8-0.948338640825749-1.02063122982878	chr13	75514331	75515030	+	0	NA	Intergenic	L1_Mus4|LINE|L1	-267814	NR_030451	751556		NR_030451	miRBase:MI0004644	Mir682	Mirn682|mir-682|mmu-mir-682	microRNA 682	ncRNA
common_peak2-29810-8-5-0.420259917226415-1.10484139239135	chr6	91204828	91205213	+	0	NA	intron (NM_001081437, intron 5 of 16)	(TCCA)n|Simple_repeat|Simple_repeat	42262	NM_007992	14115	Mm.249146	NM_007992	ENSMUSG00000064080	Fbln2	5730577E14Rik|FIBL-2	fibulin 2	protein-coding
common_peak1-8859-30-45--0.35388654656514-0.51862626278861	chr11	32347653	32349037	+	0	NA	Intergenic	Intergenic	-7027	NM_173784	327900	Mm.260956	NM_173784		Ubtd2	4930571L24|9630054F20Rik|AI645720	ubiquitin domain containing 2	protein-coding
common_peak1-18701-30-12-1.46923569135078-3.02795537370072	chr8	121695493	121696693	+	0	NA	intron (NM_019707, intron 7 of 13)	intron (NM_019707, intron 7 of 13)	-172345	NM_024219	68196	Mm.358714	NM_024219	ENSMUSG00000031839	Hsbp1	0610007A03Rik|AA408769|Hsp25	heat shock factor binding protein 1	protein-coding
common_peak1-18068-23-36--0.48768586111987-0.652802052802678	chr8	9977746	9978498	+	0	NA	intron (NM_001081119, intron 1 of 1)	CpG	405	NM_026868	68904	Mm.142570	NM_026868	ENSMUSG00000040396	Abhd13	1110065L07Rik|AI463703|AI788994	abhydrolase domain containing 13	protein-coding
unique_peak2-34063-9-12--0.510826311736872-0.394412252720706	chr13	64274332	64275002	+	0	NA	intron (NM_019986, intron 2 of 7)	B3A|SINE|B2	11493	NM_019986	56541	Mm.40989	NM_019986	ENSMUSG00000021476	Habp4	4933413D03Rik|4933428J01Rik	hyaluronic acid binding protein 4	protein-coding
common_peak1-9354-25-49--0.782006284429619-1.42714050806394	chr11	97362073	97362992	+	0	NA	promoter-TSS (NM_001289118)	promoter-TSS (NM_001289118)	-878	NM_001289118	100141474	Mm.482426	NM_001289118		4933428G20Rik	-	RIKEN cDNA 4933428G20 gene	protein-coding
common_peak2-27200-36-45--0.0442408698892587-0.301029995663982	chr3	38283325	38284172	+	0	NA	Intergenic	MT2A|LTR|ERVL	99990	NM_001167883	99696	Mm.290937	NM_001033198	ENSMUSG00000044864	Ankrd50	AI662170|E430012K20Rik|mKIAA1223|mKIAA3019	ankyrin repeat domain 50	protein-coding
common_peak1-14425-113-45-1.9251077896397-18.1208609008465	chr2	180233182	180236614	+	0	NA	5' UTR (NM_018766, exon 1 of 4)	5' UTR (NM_018766, exon 1 of 4)	217	NM_018766	18216	Mm.301712	NM_018766	ENSMUSG00000027568	Ntsr1	NT-1R|NTR-1|NTR1	neurotensin receptor 1	protein-coding
common_peak2-20341-18-10-0.853487532591054-1.03889213727317	chr10	5484011	5484592	+	0	NA	intron (NM_007956, intron 5 of 8)	Lx9|LINE|L1	206823	NM_022027	64009	Mm.331626	NM_022027	ENSMUSG00000019769	Syne1	8B|A330049M09Rik|BE692247|C130039F11Rik|CPG2|Myne1|mKIAA1756	spectrin repeat containing, nuclear envelope 1	protein-coding
common_peak1-7469-39-86--0.827182248929574-2.5314953918196	chr1	165642047	165643103	+	0	NA	intron (NM_001143956, intron 2 of 3)	L1Md_T|LINE|L1	12788	NM_001143956	240879	Mm.484621	NM_001143956		Mettl11b	Gm207|NTM1B	methyltransferase like 11B	protein-coding
common_peak2-28185-6-9--0.75652998450706-1.11707584880836	chr4	115280042	115280660	+	0	NA	intron (NM_001100181, intron 4 of 12)	ORR1B2-int|LTR|MaLR	6808	NM_001100181	100040843	Mm.482683	NM_001100181	ENSMUSG00000063929	Cyp4a32	OTTMUSG00000008689	cytochrome P450, family 4, subfamily a, polypeptide 32	protein-coding
common_peak1-14575-46-52-0.170075488685603-0.425219862997731	chr3	38283176	38284535	+	0	NA	Intergenic	Intergenic	99883	NM_001167883	99696	Mm.290937	NM_001033198	ENSMUSG00000044864	Ankrd50	AI662170|E430012K20Rik|mKIAA1223|mKIAA3019	ankyrin repeat domain 50	protein-coding
common_peak1-8780-109-57-1.52817868675963-12.5547103725217	chr11	8672829	8676320	+	0	NA	Intergenic	Intergenic	-110036	NM_001083587	319939	Mm.337820	NM_001083587	ENSMUSG00000020422	Tns3	BC023928|F830010I22Rik|TEM6|Tens1	tensin 3	protein-coding
unique_peak1-6512-14-6-1.09186123830004-1.16633110333236	chr7	118248929	118249464	+	0	NA	Intergenic	MTD|LTR|MaLR	16993	NR_015573	75479	Mm.381620	NR_015573		1700012D14Rik	-	RIKEN cDNA 1700012D14 gene	ncRNA
common_peak2-27902-59-81--0.0321880037455058-0.302378744963234	chr4	155811838	155813218	+	0	NA	Intergenic	Intergenic	-203562	NM_198305	231003	Mm.423038	NM_198305	ENSMUSG00000078484	Klhl17	AL022703|BC058738	kelch-like 17	protein-coding
unique_peak1-7338-17-3-2.21829633820504-3.11807310444576	chrX	164233112	164234053	+	0	NA	intron (NM_001290427, intron 2 of 17)	Lx9|LINE|L1	59427	NM_001290428	333605	Mm.426168	NM_001033330	ENSMUSG00000049176	Frmpd4	Gm196|PKAP1|Pdzd10|Pdzk10|Preso1|preso	FERM and PDZ domain containing 4	protein-coding
unique_peak1-6344-11-4-1.18676548936425-1.68134727924692	chr7	58397964	58398486	+	0	NA	Intergenic	Intergenic	-368174	NR_073508	233246	Mm.254431	NM_177694	ENSMUSG00000055489	Ano5	9330162L24|Gdd1|Tmem16e	anoctamin 5	protein-coding
common_peak2-29770-10-25--1.34402437313232-1.74319850844462	chr6	87810717	87811836	+	0	NA	Intergenic	Intergenic	-10176	NM_001109745	12785	Mm.290251	NM_013493	ENSMUSG00000030057	Cnbp	AA408710|Cnbp1|Znf9	cellular nucleic acid binding protein	protein-coding
common_peak2-21119-132-219--0.0629115214417952-0.333351449752981	chr11	53350217	53352292	+	0	NA	exon (NM_001252333, exon 9 of 10)	exon (NM_001252333, exon 9 of 10)	18016	NM_001252333	20362	Mm.274399	NM_033144	ENSMUSG00000018398	Sept8	AW046166|Sepl|mKIAA0202	septin 8	protein-coding
common_peak1-12027-14-21--0.560215458279653-0.519193887192484	chr17	17121357	17121977	+	0	NA	Intergenic	MMERVK10C-int|LTR|ERVK	-79400	NM_001005358	449000	Mm.483718	NM_001005358	ENSMUSG00000096696	Zfp960	-	zinc finger protein 960	protein-coding
unique_peak1-921-8-1-2.00522241794757-2.05605744720049	chr11	50379684	50380150	+	0	NA	Intergenic	URR1A|DNA|MER1_type	-35670	NM_001277305	216725	Mm.110597	NM_175643	ENSMUSG00000036545	Adamts2	ADAM-TS2|ADAMTS-2|ADAMTS-3|PCINP|hPCPNI|mKIAA4060|pNPI	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 2	protein-coding
unique_peak2-39523-5-6--0.511735258063458-0.947717972411649	chr9	65545700	65546108	+	0	NA	intron (NM_172536, intron 6 of 9)	PB1D10|SINE|Alu	21549	NM_001301307	18247	Mm.116749	NM_010952	ENSMUSG00000040652	Oaz2	AZ-2|AZ2|Oaz2-ps|Sez15	ornithine decarboxylase antizyme 2	protein-coding
unique_peak1-813-14-2-2.31425365963649-3.28500101358144	chr11	4283515	4284221	+	0	NA	intron (NM_029458, intron 10 of 10)	B1_Mus1|SINE|Alu	57217	NM_029458	75828	Mm.159592	NM_029458	ENSMUSG00000020419	Hormad2	4930529M09Rik	HORMA domain containing 2	protein-coding
common_peak1-14320-8-7-0.00522241794757061-1.00793137938329	chr2	163553913	163554362	+	0	NA	intron (NM_001272052, intron 9 of 11)	intron (NM_001272052, intron 9 of 11)	21838	NM_007398	11486	Mm.388	NM_007398	ENSMUSG00000017697	Ada	-	adenosine deaminase	protein-coding
common_peak1-13583-27-56--0.841344063269506-1.7405232834637	chr2	13574002	13575161	+	0	NA	Intergenic	Intergenic	78643	NM_011701	22352	Mm.268000	NM_011701	ENSMUSG00000026728	Vim	-	vimentin	protein-coding
common_peak1-10205-12-17--0.521149016354673-0.417187467413082	chr13	48227952	48228610	+	0	NA	intron (NR_102303, intron 1 of 2)	intron (NR_102303, intron 1 of 2)	-114304	NR_038004	70971	Mm.158514	NR_038004	ENSMUSG00000047324	4931429P17Rik	-	RIKEN cDNA 4931429P17 gene	ncRNA
unique_peak2-33062-6-5--0.0195643903408542-0.947717972411649	chr10	77203310	77203727	+	0	NA	intron (NM_001287074, intron 1 of 11)	intron (NM_001287074, intron 1 of 11)	14287	NM_001205033	100502953	Mm.486157	NM_001205033	ENSMUSG00000096421	Gm10100	ENSMUSG00000061452	predicted gene 10100	protein-coding
unique_peak2-32957-10-42--2.06984940969333-4.89888609789327	chr10	42276372	42277568	+	0	NA	Intergenic	B2_Mm2|SINE|B2	26424	NM_152229	21907	Mm.287100	NM_152229	ENSMUSG00000019803	Nr2e1	Mtl1|Mtll|TLL|Tlx|XTLL|fierce|frc|tailless	nuclear receptor subfamily 2, group E, member 1	protein-coding
common_peak1-8966-16-7-1.11826364226806-1.23399803405144	chr11	58007997	58008781	+	0	NA	Intergenic	Intergenic	-4669	NM_018738	16145	Mm.33902	NM_018738	ENSMUSG00000078853	Igtp	AW558444|Irgm3	interferon gamma induced GTPase	protein-coding
unique_peak1-3255-6-2-0.980435609659146-1.26211192963361	chr18	65100955	65101466	+	0	NA	intron (NM_001114386, intron 1 of 30)	intron (NM_001114386, intron 1 of 30)	53800	NM_001114386	83814	Mm.98668	NM_031881	ENSMUSG00000024589	Nedd4l	1300012C07Rik|Nedd4-2|Nedd4b	neural precursor cell expressed, developmentally down-regulated gene 4-like	protein-coding
common_peak2-28744-22-30--0.30691220529947-0.399869693390336	chr5	36747953	36748710	+	0	NA	Intergenic	Intergenic	-7543	NM_030889	81840	Mm.34113	NM_030889	ENSMUSG00000029093	Sorcs2	N28137|mKIAA1329	sortilin-related VPS10 domain containing receptor 2	protein-coding
common_peak2-19986-16-15-0.118263642268062-0.328191099940264	chr1	134060945	134061474	+	0	NA	Intergenic	Intergenic	-24947	NM_008795	18557	Mm.28130	NM_008795	ENSMUSG00000026437	Cdk18	AA682070|Ctk18|Pctk3	cyclin-dependent kinase 18	protein-coding
common_peak1-14865-71-120--0.274419058554623-0.696388786569421	chr3	95314606	95315903	+	0	NA	Intergenic	B1_Mur2|SINE|Alu	12122	NM_007802	13038	Mm.272085	NM_007802	ENSMUSG00000028111	Ctsk	AI323530|MMS10-Q|Ms10q|catK	cathepsin K	protein-coding
common_peak2-28370-18-10-0.853487532591054-1.03889213727317	chr4	137641051	137641722	+	0	NA	intron (NM_001256198, intron 5 of 32)	intron (NM_001256198, intron 5 of 32)	-77738	NR_105825	102466907		NR_105825		Mir6399	mmu-mir-6399	microRNA mir-6399	ncRNA
unique_peak1-877-16-5-1.53330114154691-1.80287260729378	chr11	31224253	31225065	+	0	NA	Intergenic	L1Md_F3|LINE|L1	45402	NM_011491	20856	Mm.32506	NM_011491		Stc2	AW125853|Stc2l|mustc2	stanniocalcin 2	protein-coding
unique_peak2-38464-7-9--0.522837264589173-1.05908390183068	chr7	28930152	28930566	+	0	NA	intron (NM_001164655, intron 7 of 19)	intron (NM_001164655, intron 7 of 19)	15874	NM_001164655	319482	Mm.483194	NM_176924	ENSMUSG00000078776	9530053A07Rik	FCGBP	RIKEN cDNA 9530053A07 gene	protein-coding
common_peak1-15538-11-9-0.186765489364251-0.344532117358383	chr4	119108835	119109341	+	0	NA	intron (NM_001014900, intron 2 of 7)	URR1B|DNA|MER1_type	13799	NM_001014900	332934	Mm.388911	NM_001014900	ENSMUSG00000070806	Zmynd12	AI414736	zinc finger, MYND domain containing 12	protein-coding
common_peak1-12918-7-8--0.370834171144123-1.00793137938329	chr18	90578944	90579491	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-100329	NM_198295	67988	Mm.268041	NM_198295	ENSMUSG00000024614	Tmx3	6430411B10Rik|A730024F05Rik|AV259382|Txndc10|mKIAA1830	thioredoxin-related transmembrane protein 3	protein-coding
common_peak1-11782-27-23-0.40658345017408-0.622271369641148	chr16	45944584	45945711	+	0	NA	Intergenic	Intergenic	65379	NM_001134480	433022	Mm.380993	NM_001134480	ENSMUSG00000087141	Plcxd2	AW494639|EG433022	phosphatidylinositol-specific phospholipase C, X domain containing 2	protein-coding
common_peak2-22611-12-7-0.648775985087639-0.697979855752659	chr13	74770225	74770641	+	0	NA	Intergenic	Intergenic	-6887	NM_030711	80898	Mm.83526	NM_030711	ENSMUSG00000021583	Erap1	Arts1|ERAAP|PILSA|PILSAP	endoplasmic reticulum aminopeptidase 1	protein-coding
unique_peak1-57-10-0-3.35641534500877-3.31132995230379	chr1	33482133	33482541	+	0	NA	Intergenic	AT_rich|Low_complexity|Low_complexity	244302	NM_008922	19076	Mm.27705	NM_008922	ENSMUSG00000026134	Prim2	AI323589	DNA primase, p58 subunit	protein-coding
unique_peak1-4314-9-3-1.18961340640422-1.57096726280955	chr2	150753703	150754224	+	0	NA	intron (NM_027014, intron 6 of 6)	B1_Mus1|SINE|Alu	18633	NM_001163476	69270	Mm.271603	NM_027014	ENSMUSG00000027454	Gins1	2810418N01Rik|Gins4|PSF1|mKIAA0186	GINS complex subunit 1 (Psf1 homolog)	protein-coding
common_peak2-31829-10-9-0.0344872501214071-1.05503135781948	chr9	44378852	44379343	+	0	NA	Intergenic	Intergenic	-33878	NM_001110826	13209	Mm.267061	NM_007841	ENSMUSG00000032097	Ddx6	1110001P04Rik|E230023J21Rik|HLR2|mRCK/P54|p54|rck	DEAD (Asp-Glu-Ala-Asp) box polypeptide 6	protein-coding
common_peak2-32003-34-26-0.627181024837798-1.12624088074371	chr9	71667983	71668534	+	0	NA	Intergenic	Intergenic	-48849	NM_026599	68178	Mm.99961	NM_026599	ENSMUSG00000032232	Cgnl1	4933421H10Rik|9930020M10Rik|AI503810|Jacop	cingulin-like 1	protein-coding
common_peak2-21131-15-10-0.552733131918359-0.604422558181019	chr11	54060663	54061124	+	0	NA	3' UTR (NM_009969, exon 4 of 4)	3' UTR (NM_009969, exon 4 of 4)	2508	NM_009969	12981	Mm.4922	NM_009969		Csf2	Csfgm|GMCSF|Gm-CSf|MGI-IGM	colony stimulating factor 2 (granulocyte-macrophage)	protein-coding
unique_peak2-35004-3-8--1.58390809140159-1.39487600375387	chr15	99874988	99875372	+	0	NA	intron (NM_001159361, intron 1 of 37)	intron (NM_001159361, intron 1 of 37)	6085	NM_001159361	239667	Mm.243658	NM_172819	ENSMUSG00000023026	Dip2b	4932422C22|AI317237|AI854602|mKIAA1463	DIP2 disco-interacting protein 2 homolog B (Drosophila)	protein-coding
common_peak1-15284-9-8-0.0196884049619079-1.03275496310833	chr4	40852306	40852853	+	0	NA	Intergenic	Intergenic	-14510	NM_011463	20731	Mm.25246	NM_011463	ENSMUSG00000028415	Spink4	MPGC60	serine peptidase inhibitor, Kazal type 4	protein-coding
unique_peak2-37915-5-14--1.61127093161437-1.95509489018123	chr5	144357629	144358329	+	0	NA	Intergenic	ORR1B1-int|LTR|MaLR	-25337	NM_011182	19159	Mm.281003	NM_011182	ENSMUSG00000018001	Cyth3	AI648983|ARNO3|CLM3|Grp1|Pscd3	cytohesin 3	protein-coding
common_peak1-7612-56-81--0.121956179178841-0.351153259497152	chr1	59762409	59764322	+	0	NA	intron (NM_018868, intron 10 of 14)	intron (NM_018868, intron 10 of 14)	1713	NR_028521	100217421		NR_028521		Snord11	MBII-95	small nucleolar RNA, C/D box 11	snoRNA
common_peak2-27926-40-36-0.449522317122148-0.865433649227636	chr4	12170868	12171934	+	0	NA	Intergenic	B4A|SINE|B4	-72239	NM_026558	68099	Mm.25340	NM_026558	ENSMUSG00000028218	Fam92a	6720467C03Rik|Fam92a1	family with sequence similarity 92, member A	protein-coding
common_peak1-16057-15-16--0.075298090694683-0.301029995663976	chr5	43948541	43949208	+	0	NA	intron (NM_001135172, intron 1 of 2)	intron (NM_001135172, intron 1 of 2)	42066	NM_001135172	109323	Mm.275553	NM_175425	ENSMUSG00000061535	C1qtnf7	5530401N20Rik|8430425G24Rik|Ctrp7	C1q and tumor necrosis factor related protein 7	protein-coding
common_peak1-9113-84-113-0.102044044724284-0.375894798787257	chr11	72794925	72796824	+	0	NA	intron (NM_001163336, intron 15 of 20)	intron (NM_001163336, intron 15 of 20)	-16773	NM_008771	18436	Mm.25722	NM_008771	ENSMUSG00000020787	P2rx1	AI323649|BB122383|P2x|Pdcd3|RP-2	purinergic receptor P2X, ligand-gated ion channel, 1	protein-coding
common_peak2-20432-29-32-0.0678959612566574-0.330208782692001	chr10	30802447	30803552	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-230212	NM_027168	69692	Mm.245537	NM_027168	ENSMUSG00000000295	Hddc2	2310057G13Rik	HD domain containing 2	protein-coding
common_peak2-27061-20-32--0.55631933476726-0.705485015404196	chr2	181520329	181521168	+	0	NA	intron (NM_001171615, intron 2 of 22)	intron (NM_001171615, intron 2 of 22)	-10264	NM_001171680	17932	Mm.458718	NM_008665	ENSMUSG00000010505	Myt1	Nzf2|Nzf2a|Nzf2b|Nztf2	myelin transcription factor 1	protein-coding
common_peak1-8919-112-108-0.665065975543357-3.59572431778745	chr11	51688137	51689739	+	0	NA	Intergenic	CT-rich|Low_complexity|Low_complexity	-17955	NM_199299	76901	Mm.259996	NM_199299	ENSMUSG00000020387	Jade2	1200017K05Rik|AI480685|Phf15|mKIAA0239	jade family PHD finger 2	protein-coding
common_peak2-21280-7-9--0.522837264589173-1.05908390183068	chr11	70239193	70239631	+	0	NA	Intergenic	RMER15|LTR|ERVL	-6670	NM_001271360	216869	Mm.203747	NM_145429	ENSMUSG00000060216	Arrb2	AI326910|AW122872	arrestin, beta 2	protein-coding
common_peak2-24136-25-65--1.18254421401335-3.37274147056187	chr16	35983188	35984306	+	0	NA	intron (NM_008465, intron 1 of 13)	CpG	298	NM_008465	16646	Mm.6952	NM_008465	ENSMUSG00000022905	Kpna1	AW494490|IPOA5|NPI1|Rch2|mSRP1	karyopherin (importin) alpha 1	protein-coding
common_peak2-23634-9-8-0.0196884049619079-1.03275496310833	chr15	83446515	83446978	+	0	NA	intron (NM_022723, intron 15 of 21)	intron (NM_022723, intron 15 of 21)	-21159	NM_183017	223723	Mm.46778	NM_183017	ENSMUSG00000016757	Ttll12	BC055368|D430005B17	tubulin tyrosine ligase-like family, member 12	protein-coding
unique_peak1-3583-9-3-1.18961340640422-1.57096726280955	chr19	29496211	29496767	+	0	NA	intron (NM_021396, intron 1 of 5)	intron (NM_021396, intron 1 of 5)	11080	NM_021396	58205	Mm.116737	NM_021396		Pdcd1lg2	B7-DC|Btdc|F730015O22Rik|PD-L2	programmed cell death 1 ligand 2	protein-coding
unique_peak2-36735-10-20--1.03590207776999-1.03889213727317	chr3	57293628	57294605	+	0	NA	intron (NM_133784, intron 3 of 6)	intron (NM_133784, intron 3 of 6)	64784	NM_145539	229302	Mm.26618	NM_145539	ENSMUSG00000027801	Tm4sf4	Iltmp	transmembrane 4 superfamily member 4	protein-coding
unique_peak2-35983-5-13--1.51173525806346-1.78669045979184	chr19	24961032	24961608	+	0	NA	Intergenic	RLTR28|LTR|ERVL	14479	NM_008022	14237	Mm.377080	NM_008022	ENSMUSG00000051490	Foxd4	FREAC5|Fkh2	forkhead box D4	protein-coding
unique_peak2-35105-2-7--1.91745425626332-1.45399745587252	chr16	21353413	21353835	+	0	NA	Intergenic	Intergenic	-56679	NR_046162	328646	Mm.404748	NR_046162	ENSMUSG00000096918	Gm16863	A830060N17	predicted gene, 16863	ncRNA
common_peak2-29276-44-59--0.0849977610399835-0.308518202581802	chr5	142908836	142910933	+	0	NA	intron (NM_199068, intron 1 of 8)	B4|SINE|B4	-30001	NM_172725	231855	Mm.78250	NM_172725	ENSMUSG00000039623	Ap5z1	C330006K01Rik	adaptor-related protein complex 5, zeta 1 subunit	protein-coding
unique_peak1-3773-12-0-3.64877598508764-4.21441993929574	chr19	55539177	55539937	+	0	NA	intron (NM_016862, intron 5 of 7)	intron (NM_016862, intron 5 of 7)	149010	NM_001293686	53611	Mm.258637	NM_016862	ENSMUSG00000024983	Vti1a	1110014F16Rik|1110018K19Rik|4921537J05Rik|MVti1|MVti1a|Vti1|Vti1-rp2	vesicle transport through interaction with t-SNAREs 1A	protein-coding
common_peak2-20719-9-16--0.897849434846119-0.732381977911291	chr10	95643645	95644150	+	0	NA	Intergenic	Intergenic	-44944	NR_110448	74881	Mm.410819	NR_110448		4930459C07Rik	-	RIKEN cDNA 4930459C07 gene	ncRNA
common_peak1-10621-59-59-0.418473405264059-0.992609803880126	chr14	34362233	34364732	+	0	NA	Intergenic	Intergenic	-38974	NM_008978	19256	Mm.8019	NM_008978	ENSMUSG00000021940	Ptpn20	typ	protein tyrosine phosphatase, non-receptor type 20	protein-coding
unique_peak1-28-9-0-3.18961340640422-3.01029995663981	chr1	10278925	10279427	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-56425	NM_001102430	211673	Mm.229141	NM_001102430	ENSMUSG00000067851	Arfgef1	ARFGEP1|BIG1|D130059B05Rik|D730028O18Rik|P200	ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited)	protein-coding
common_peak2-25799-11-5-0.923731083530457-1.477227296591	chr19	37380261	37380712	+	0	NA	intron (NM_031156, intron 10 of 23)	intron (NM_031156, intron 10 of 23)	24617	NM_031156	15925	Mm.28366	NM_031156	ENSMUSG00000056999	Ide	1300012G03Rik|4833415K22Rik|AA675336|AI507533	insulin degrading enzyme	protein-coding
common_peak2-29295-24-49--0.850646287007008-1.56058662248874	chr5	144255142	144256012	+	0	NA	intron (NM_144915, intron 11 of 14)	intron (NM_144915, intron 11 of 14)	30216	NM_144915	231871	Mm.469963	NM_144915	ENSMUSG00000039206	Daglb	E330036I19Rik	diacylglycerol lipase, beta	protein-coding
common_peak2-22003-63-53-0.683425088907121-2.11210046032967	chr12	55302005	55303601	+	0	NA	intron (NM_028133, intron 1 of 4)	intron (NM_028133, intron 1 of 4)	2058	NM_028133	112407	Mm.133037	NM_028133	ENSMUSG00000035105	Egln3	2610021G09Rik|AI505553|AI648162|Hif-p4h-3|Phd3|SM-20	egl-9 family hypoxia-inducible factor 3	protein-coding
common_peak1-14172-15-9-0.690236655668294-0.732381977911291	chr2	140847175	140848010	+	0	NA	intron (NM_001013802, intron 4 of 18)	L1Md_F2|LINE|L1	-350380	NM_178382	71436	Mm.426781	NM_178382	ENSMUSG00000051379	Flrt3	5530600M07Rik|C430047I10Rik|mKIAA1469	fibronectin leucine rich transmembrane protein 3	protein-coding
unique_peak1-6279-11-4-1.18676548936425-1.68134727924692	chr7	28587149	28587811	+	0	NA	Intergenic	Lx7|LINE|L1	-36123	NM_011762	22717	Mm.379046	NM_011762		Zfp59	Mfg-2|Mfg2	zinc finger protein 59	protein-coding
unique_peak2-36705-1-7--2.62705701021674-1.80617997398389	chr3	50905505	50905866	+	0	NA	Intergenic	IAPEy-int|LTR|ERVK	-122684	NM_009834	12457	Mm.86541	NM_009834	ENSMUSG00000023087	Ccrn4l	AU043840|Ccr4|nocturnin	CCR4 carbon catabolite repression 4-like (S. cerevisiae)	protein-coding
common_peak1-7442-26-6-2.12054417010086-4.0937649558367	chr1	51265262	51266199	+	0	NA	Intergenic	Intergenic	-80240	NM_138741	20324	Mm.398690	NM_138741	ENSMUSG00000045954	Sdpr	-	serum deprivation response	protein-coding
common_peak2-26524-19-18-0.154759813218101-0.351190433797598	chr2	91115245	91115740	+	0	NA	exon (NM_023854, exon 15 of 16)	exon (NM_023854, exon 15 of 16)	10220	NM_023854	77038	Mm.43636	NM_023854	ENSMUSG00000027255	Arfgap2	2310032E02Rik|Zfp289	ADP-ribosylation factor GTPase activating protein 2	protein-coding
common_peak2-28162-12-22--0.874785970969374-0.809260849721102	chr4	107879514	107880353	+	0	NA	intron (NM_001167936, intron 2 of 13)	intron (NM_001167936, intron 2 of 13)	10594	NM_001167936	230590	Mm.301798	NM_001167936	ENSMUSG00000034645	Zyg11a	BC022150	zyg-11 family member A, cell cycle regulator	protein-coding
common_peak2-29862-51-57-0.216942830475001-0.476339052167849	chr6	100833400	100834383	+	0	NA	Intergenic	MTEa|LTR|MaLR	50259	NM_182939	232314	Mm.27223	NM_182939	ENSMUSG00000052144	Ppp4r2	BE691708|C230060M08Rik	protein phosphatase 4, regulatory subunit 2	protein-coding
common_peak1-9864-13-12-0.0780323124966764-0.334470287753051	chr12	80463018	80463739	+	0	NA	intron (NM_009014, intron 7 of 10)	B3|SINE|B2	65040	NM_001252562	19363	Mm.341756	NM_009014	ENSMUSG00000059060	Rad51b	AI553500|R51H2|Rad51l1|mREC2	RAD51 homolog B	protein-coding
common_peak2-31240-48-37-0.722999637791229-1.78594796811656	chr8	70461078	70462753	+	0	NA	intron (NM_177698, intron 3 of 14)	intron (NM_177698, intron 3 of 14)	-27070	NM_030263	234353	Mm.32525	NM_027626	ENSMUSG00000030465	Psd3	4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D	pleckstrin and Sec7 domain containing 3	protein-coding
common_peak2-29402-75-52-1.01114653718009-4.51889462061216	chr6	99171283	99172846	+	0	NA	intron (NM_053202, intron 3 of 18)	intron (NM_053202, intron 3 of 18)	44445	NM_001197321	108655	Mm.234965	NM_053202	ENSMUSG00000030067	Foxp1	3110052D19Rik|4932443N09Rik|AI461938|AW494214	forkhead box P1	protein-coding
common_peak2-24269-38-29-0.664562063690012-1.32967515660734	chr16	94370168	94371437	+	0	NA	intron (NM_139145, intron 5 of 9)	intron (NM_139145, intron 5 of 9)	138661	NM_139145	110948	Mm.30921	NM_139145	ENSMUSG00000040820	Hlcs	410I21.SP6|D16Jhu34	holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase)	protein-coding
common_peak1-18892-653-647-1.1660775529918-69.3716314579006	chr9	35304766	35305708	+	0	NA	intron (NM_021339, intron 17 of 18)	intron (NM_021339, intron 17 of 18)	45576	NM_021339	57810	Mm.80509	NM_021339	ENSMUSG00000038119	Cdon	CDO|Cd0|Orcam	cell adhesion molecule-related/down-regulated by oncogenes	protein-coding
common_peak1-15096-84-112-0.114755096473838-0.393856228441667	chr3	130729563	130730989	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-82939	NM_010703	16842	Mm.255219	NM_010703	ENSMUSG00000027985	Lef1	3000002B05|AI451430|Lef-1	lymphoid enhancer binding factor 1	protein-coding
common_peak1-17898-9-17--0.980311595038092-0.844317084070804	chr7	120982529	120983045	+	0	NA	intron (NM_145584, intron 3 of 15)	intron (NM_145584, intron 3 of 15)	73275	NM_145584	233744	Mm.334160	NM_145584	ENSMUSG00000038156	Spon1	AI666765|AW455831|BC020531|D330035F22Rik|FSP	spondin 1, (f-spondin) extracellular matrix protein	protein-coding
common_peak2-30104-23-16-0.634304663258741-0.82304638657543	chr6	135262876	135263775	+	0	NA	Intergenic	Intergenic	-2923	NM_029595	76400	Mm.293018	NM_029595		Pbp2	1700023A18Rik|AI326308|Pebp-2|Pebp2	phosphatidylethanolamine binding protein 2	protein-coding
unique_peak1-77-8-1-2.00522241794757-2.05605744720049	chr1	39237743	39238259	+	0	NA	Intergenic	Intergenic	5836	NR_105767	102466631		NR_105767	miRBase:MI0021877	Mir6349	mmu-mir-6349	microRNA mir-6349	ncRNA
common_peak1-16453-17-12-0.517856620063946-0.647240723060192	chr5	135913994	135914870	+	0	NA	exon (NM_146001, exon 12 of 31)	exon (NM_146001, exon 12 of 31)	-44016	NM_148932	107939	Mm.28399	NM_148932	ENSMUSG00000053293	Pom121	2610027A18Rik|C80273|mKIAA0618	nuclear pore membrane protein 121	protein-coding
common_peak2-19899-10-13--0.450939577048835-0.386243247519795	chr1	106759860	106760394	+	0	NA	intron (NM_011800, intron 1 of 11)	L1Md_F2|LINE|L1	94731	NM_011800	23836	Mm.103640	NM_011800	ENSMUSG00000050840	Cdh20	Cdh7	cadherin 20	protein-coding
unique_peak2-33816-6-11--1.01956439034085-1.32595962126035	chr12	73842073	73842779	+	0	NA	Intergenic	Intergenic	-19772	NM_008910	19042	Mm.261045	NM_008910	ENSMUSG00000021096	Ppm1a	2310003C21Rik|2900017D14Rik|AI427932|AU017636|MMPa-2|MPPa-1	protein phosphatase 1A, magnesium dependent, alpha isoform	protein-coding
common_peak2-22689-15-19--0.309763344331706-0.356936432242222	chr13	98504610	98505345	+	0	NA	Intergenic	MER5A|DNA|MER1_type	175022	NR_046157	328314	Mm.138047	NR_046157		Gm5086	B230311A21|EG328314	predicted gene 5086	ncRNA
unique_peak2-34630-4-7--1.02346051385325-1.09384600808989	chr14	78732001	78732433	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-24367	NM_011613	21943	Mm.249221	NM_011613	ENSMUSG00000022015	Tnfsf11	Ly109l|ODF|OPG|OPGL|RANKL|Trance	tumor necrosis factor (ligand) superfamily, member 11	protein-coding
unique_peak2-38182-6-6--0.241956811677302-0.947717972411649	chr6	94264169	94264603	+	0	NA	Intergenic	RLTR10C|LTR|ERVK	-30475	NM_001286785	14924	Mm.217216	NM_010367	ENSMUSG00000045095	Magi1	AIP3|BAP1|Baiap1|Gukmi1|MAGI1c|Magi-1|TNRC19|WWP3|mKIAA4129	membrane associated guanylate kinase, WW and PDZ domain containing 1	protein-coding
common_peak1-11266-38-76--0.695333881396371-1.6858729052488	chr15	81465493	81467008	+	0	NA	intron (NM_177821, intron 20 of 30)	B1_Mur2|SINE|Alu	-28069	NM_001289712	214669	Mm.280768	NM_145993	ENSMUSG00000022394	L3mbtl2	4732493N06Rik|M4mbt	l(3)mbt-like 2 (Drosophila)	protein-coding
common_peak2-26337-5-4--0.0263084308932156-0.909929411522249	chr2	35132217	35132640	+	0	NA	intron (NM_001206367, intron 2 of 17)	RLTR21|LTR|ERVK	-5472	NM_146120	227753	Mm.21109	NM_146120	ENSMUSG00000026879	Gsn	ADF	gelsolin	protein-coding
unique_peak2-39949-1-4--1.94898510510411-1.10720996964787	chrX	137172887	137173190	+	0	NA	Intergenic	RMER15|LTR|ERVL	-37977	NM_001077364	14605	Mm.22216	NM_010286	ENSMUSG00000031431	Tsc22d3	DIP|Dsip1|Gilz|TSC-22R|Tilz3	TSC22 domain family, member 3	protein-coding
unique_peak1-6833-12-0-3.64877598508764-4.21441993929574	chr8	79613237	79613928	+	0	NA	intron (NM_001083906, intron 3 of 8)	intron (NM_001083906, intron 3 of 8)	187175	NM_001083906	110784	Mm.324393	NM_001083906	ENSMUSG00000031618	Nr3c2	MR|Mlr	nuclear receptor subfamily 3, group C, member 2	protein-coding
common_peak1-12450-17-17-0.0483713367627256-0.325169893479371	chr17	83221986	83223064	+	0	NA	Intergenic	Intergenic	255040	NR_045094	100503434	Mm.187281	NR_045094		Gm19689	-	predicted gene, 19689	ncRNA
unique_peak2-35417-3-8--1.58390809140159-1.39487600375387	chr17	33929580	33930092	+	0	NA	Intergenic	L1ME1|LINE|L1	-11316	NM_020581	57875	Mm.196189	NM_020581		Angptl4	Arp4|Bk89|Fiaf|Hfarp|Ng27|Pgar|Pgarg|Pp1158	angiopoietin-like 4	protein-coding
unique_peak2-32926-6-7--0.434601889619698-0.97990265578305	chr10	25928101	25928445	+	0	NA	Intergenic	RodERV21-int|LTR|ERV1	-21240	NM_001013766	268288	Mm.213322	NM_001013766	ENSMUSG00000051354	Samd3	Gm623	sterile alpha motif domain containing 3	protein-coding
unique_peak1-1260-15-3-2.01216475055566-3.03427613622886	chr11	116682068	116682917	+	0	NA	intron (NM_026280, intron 1 of 3)	intron (NM_026280, intron 1 of 3)	6868	NM_026280	67622	Mm.64962	NM_026280	ENSMUSG00000020814	Mxra7	1810057P16Rik|E130302J09Rik	matrix-remodelling associated 7	protein-coding
unique_peak1-1975-8-4-0.683294323060208-1.21878474469819	chr14	121239708	121240201	+	0	NA	Intergenic	Intergenic	-70462	NM_023579	70572	Mm.221452	NM_023579	ENSMUSG00000030662	Ipo5	1110011C18Rik|5730478E03Rik|AA409333|C76941|IMB3|Kpnb3|Ranbp5	importin 5	protein-coding
unique_peak1-4237-17-2-2.63333383748388-3.75443312462699	chr2	125731695	125732390	+	0	NA	intron (NM_001291002, intron 5 of 9)	intron (NM_001291002, intron 5 of 9)	40083	NM_001291002	69976	Mm.20216	NM_175154	ENSMUSG00000027207	Galk2	2810017M24Rik|AI327030|Gk2	galactokinase 2	protein-coding
unique_peak1-6615-8-1-2.00522241794757-2.05605744720049	chr8	4216944	4217475	+	0	NA	5' UTR (NM_207203, exon 1 of 7)	5' UTR (NM_207203, exon 1 of 7)	103	NM_207203	73072	Mm.477379	NM_207203	ENSMUSG00000064125	BC068157	-	cDNA sequence BC068157	protein-coding
common_peak2-22789-9-8-0.0196884049619079-1.03275496310833	chr14	7848006	7848456	+	0	NA	intron (NM_001164727, intron 2 of 6)	intron (NM_001164727, intron 2 of 6)	11732	NM_001164727	100038847	Mm.443041	NM_001164727	ENSMUSG00000093985	Gm10406	ENSMUSG00000072735	predicted gene 10406	protein-coding
unique_peak2-37939-2-5--1.50241675698448-1.08602067057793	chr5	147566685	147567076	+	0	NA	intron (NM_011669, intron 3 of 8)	intron (NM_011669, intron 3 of 8)	39652	NM_011669	22217	Mm.167971	NM_011669	ENSMUSG00000029640	Usp12	Ubh1	ubiquitin specific peptidase 12	protein-coding
common_peak2-21776-28-30-0.0987628094345876-0.332062764479303	chr11	117204955	117205914	+	0	NA	intron (NM_001113488, intron 1 of 9)	intron (NM_001113488, intron 1 of 9)	11807	NM_001113488	53860	Mm.38450	NM_017380	ENSMUSG00000059248	Sept9	MSF1|Msf|PNUTL4|Sint1	septin 9	protein-coding
common_peak2-22125-8-6-0.197867495889966-1.03789460276074	chr12	84385053	84385425	+	0	NA	intron (NM_001267625, intron 7 of 10)	MIR|SINE|MIR	-345097	NR_046045	74283	Mm.398247	NR_046045		1700085C21Rik	-	RIKEN cDNA 1700085C21 gene	ncRNA
common_peak1-11309-45-53-0.105470523181403-0.349953584539098	chr15	84280225	84281648	+	0	NA	Intergenic	Intergenic	-3409	NM_001163145	72301	Mm.275387	NM_001163145	ENSMUSG00000062760	1810041L15Rik	Kiaa1644	RIKEN cDNA 1810041L15 gene	protein-coding
common_peak2-20771-7-23--1.78587167042297-2.25371873249797	chr10	117023863	117024494	+	0	NA	Intergenic	Intergenic	-42378	NM_027468	70574	Mm.339332	NM_027468	ENSMUSG00000020183	Cpm	1110060I01Rik|5730456K23Rik|AA589379|E030045M14Rik	carboxypeptidase M	protein-coding
common_peak2-27681-11-15--0.491306415748387-0.435191258261915	chr3	116952740	116953526	+	0	NA	Intergenic	Intergenic	110661	NM_177664	229791	Mm.140138	NM_177664	ENSMUSG00000044667	Lppr4	A330086D10|D3Bwg0562e|PRG-1|mKIAA0455	lipid phosphate phosphatase-related protein type 4	protein-coding
unique_peak1-2634-7-1-1.79909083029819-1.80617997398389	chr16	43581772	43582257	+	0	NA	intron (NM_001285805, intron 9 of 10)	intron (NM_001285805, intron 9 of 10)	-58754	NR_030576	100124467		NR_030576	miRBase:MI0005517	Mir568	Mirn568|mmu-mir-568	microRNA 568	ncRNA
unique_peak1-3190-17-1-3.21829633820504-4.59734841376773	chr18	50024278	50024964	+	0	NA	exon (NM_001081371, exon 12 of 43)	exon (NM_001081371, exon 12 of 43)	31970	NM_001081371	240283	Mm.257790	NM_001081371	ENSMUSG00000037416	Dmxl1	C630007L23Rik|D030030C22	Dmx-like 1	protein-coding
common_peak2-19708-102-117-0.388445427477713-1.40141782675522	chr1	64532070	64533861	+	0	NA	Intergenic	B4A|SINE|B4	-46413	NM_133828	12912	Mm.422634	NM_009952	ENSMUSG00000025958	Creb1	2310001E10Rik|3526402H21Rik|AV083133|Creb|Creb-1	cAMP responsive element binding protein 1	protein-coding
unique_peak1-1409-10-3-1.35641534500877-1.75805390616669	chr12	76546078	76546709	+	0	NA	Intergenic	ID_B1|SINE|B4	-28625	NM_175644	217674	Mm.252250	NM_175644	ENSMUSG00000048982	Gphb5	Zlut1	glycoprotein hormone beta 5	protein-coding
common_peak1-11957-62-132--0.644530976699105-2.52914441450398	chr17	6106351	6107539	+	0	NA	5' UTR (NM_001103181, exon 1 of 14)	5' UTR (NM_001103181, exon 1 of 14)	115	NM_001103181	68842	Mm.449307	NM_054040	ENSMUSG00000034377	Tulp4	1110057P05Rik|2210038L17Rik|Tusp	tubby like protein 4	protein-coding
common_peak2-19674-37-53--0.228894430677649-0.408596647434913	chr1	56971884	56973354	+	0	NA	intron (NM_139146, intron 3 of 10)	intron (NM_139146, intron 3 of 10)	55559	NM_139146	212712	Mm.145599	NM_139146	ENSMUSG00000038331	Satb2	mKIAA1034	special AT-rich sequence binding protein 2	protein-coding
common_peak1-14160-50-62-0.0636603929790356-0.328177820381495	chr2	136890849	136892800	+	0	NA	intron (NM_001038641, intron 6 of 7)	intron (NM_001038641, intron 6 of 7)	50432	NM_013822	16449	Mm.22398	NM_013822	ENSMUSG00000027276	Jag1	ABE2|Gsfabe2|Htu|Ozz|Ser-1	jagged 1	protein-coding
unique_peak1-2498-15-3-2.01216475055566-3.03427613622886	chr16	11908648	11909308	+	0	NA	intron (NR_033509, intron 2 of 2)	intron (NR_033509, intron 2 of 2)	538	NM_146067	223978	Mm.86360	NM_146067	ENSMUSG00000065979	Cpped1	C530044N13Rik	calcineurin-like phosphoesterase domain containing 1	protein-coding
unique_peak2-39287-6-8--0.60452689106201-1.03789460276074	chr8	122568071	122568550	+	0	NA	intron (NM_030209, intron 14 of 14)	intron (NM_030209, intron 14 of 14)	51940	NM_030209	78892	Mm.264680	NM_030209	ENSMUSG00000031825	Crispld2	1810049K24Rik|Lcrisp2|Lgl1|coffeecrisp	cysteine-rich secretory protein LCCL domain containing 2	protein-coding
unique_peak2-39429-7-17--1.37083417114412-1.23399803405144	chr9	44406795	44407511	+	0	NA	Intergenic	Intergenic	-5822	NM_001110826	13209	Mm.267061	NM_007841	ENSMUSG00000032097	Ddx6	1110001P04Rik|E230023J21Rik|HLR2|mRCK/P54|p54|rck	DEAD (Asp-Glu-Ala-Asp) box polypeptide 6	protein-coding
common_peak1-10105-48-24-1.32707096146009-4.23598905726475	chr13	28757036	28759057	+	0	NA	intron (NR_045053, intron 5 of 8)	intron (NR_045053, intron 5 of 8)	44696	NR_105787	102466635		NR_105787	miRBase:MI0021897	Mir6368	mmu-mir-6368	microRNA mir-6368	ncRNA
common_peak1-12683-32-51--0.421347698921432-0.649502410911277	chr18	38418751	38419786	+	0	NA	intron (NM_024179, intron 10 of 12)	intron (NM_024179, intron 10 of 12)	-9049	NR_027904	73516	Mm.48776	NR_015475	ENSMUSG00000097080	1700086O06Rik	-	RIKEN cDNA 1700086O06 gene	ncRNA
common_peak1-19491-18-17-0.142994149786039-0.353907621462753	chrX	155193122	155194189	+	0	NA	Intergenic	Intergenic	-500059	NM_148945	110651	Mm.328476	NM_148945	ENSMUSG00000031309	Rps6ka3	C130006E23|MAPKAPK-1b|MPK-9|Rsk2|S6K-alpha3|p90RSK3|pp90RSK2	ribosomal protein S6 kinase polypeptide 3	protein-coding
unique_peak2-35689-0-7--3.84013093047421-1.80617997398389	chr18	20887839	20888167	+	0	NA	intron (NM_019737, intron 1 of 8)	intron (NM_019737, intron 1 of 8)	16902	NM_019737	56386	Mm.393827	NM_019737	ENSMUSG00000056124	B4galt6	AA536803|AU022389	UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 6	protein-coding
common_peak1-14704-12-10-0.189344366450341-0.386243247519795	chr3	69222612	69223174	+	0	NA	intron (NM_178726, intron 1 of 3)	intron (NM_178726, intron 1 of 3)	102053	NM_178726	242083	Mm.40577	NM_178726		Ppm1l	3222401G13|5930404J21Rik|AI481720|AW045850|PP2C|PP2Cepsilon|Pp2ce|Ppp2ce|mKIAA4175	protein phosphatase 1 (formerly 2C)-like	protein-coding
common_peak1-8879-23-37--0.526160008934505-0.720235944639228	chr11	44462421	44463184	+	0	NA	intron (NM_001290710, intron 6 of 14)	intron (NM_001290710, intron 6 of 14)	31200	NM_001290710	13591	Mm.439662	NM_007897		Ebf1	Ebf|O/E-1|OE-1|Olf-1|Olf1	early B cell factor 1	protein-coding
common_peak1-16958-11-9-0.186765489364251-0.344532117358383	chr6	85333078	85333745	+	0	NA	Intergenic	Intergenic	-8783	NM_001003955	52055	Mm.220334	NM_177466	ENSMUSG00000051343	Rab11fip5	9130206P09Rik|C75969|D6Ertd32e|GAF1|RIP11	RAB11 family interacting protein 5 (class I)	protein-coding
unique_peak2-33616-2-26--3.67234175842679-5.60081203524255	chr11	95401885	95402857	+	0	NA	Intergenic	Intergenic	-26492	NM_130858	104079	Mm.22970	NM_130858	ENSMUSG00000046719	Nxph3	-	neurexophilin 3	protein-coding
common_peak2-22715-48-54-0.189567437710155-0.451511310064814	chr13	103773589	103774683	+	0	NA	intron (NM_175171, intron 4 of 28)	intron (NM_175171, intron 4 of 28)	290498	NM_008533	17079	Mm.373974	NM_008533	ENSMUSG00000021624	Cd180	F630107B15|Ly78|RP105	CD180 antigen	protein-coding
unique_peak1-5090-8-2-1.42025991722641-1.65811743852845	chr4	149080866	149081292	+	0	NA	Intergenic	ORR1B1-int|LTR|MaLR	-5341	NM_001029837	18707	Mm.229108	NM_008840	ENSMUSG00000039936	Pik3cd	2410099E07Rik|2610208K16Rik|AW545373|p110delta	phosphatidylinositol 3-kinase catalytic delta polypeptide	protein-coding
common_peak2-23472-85-142--0.204468088653738-0.565727360930377	chr15	73422483	73424122	+	0	NA	intron (NM_001033219, intron 2 of 7)	MTD|LTR|MaLR	3654	NM_001168255	106068	Mm.212813	NM_001033219	ENSMUSG00000079020	Slc45a4	9330175B01Rik|AW552276	solute carrier family 45, member 4	protein-coding
unique_peak2-33232-7-12--0.901348887842903-1.31827279259406	chr10	120666146	120666604	+	0	NA	Intergenic	Intergenic	81870	NM_029057	74694	Mm.233833	NM_029057	ENSMUSG00000052302	Tbc1d30	4930505D03Rik	TBC1 domain family, member 30	protein-coding
common_peak1-18612-14-14--0.00767443525087419-0.308519316180257	chr8	107424290	107425089	+	0	NA	Intergenic	Intergenic	-25471	NM_001163756	234673	Mm.441134	NM_172759	ENSMUSG00000031886	Ces2e	9030624L02Rik|Ces5	carboxylesterase 2E	protein-coding
unique_peak1-4468-10-3-1.35641534500877-1.75805390616669	chr2	180280172	180280700	+	0	NA	TTS (NM_018766)	TTS (NM_018766)	-35573	NM_028479	73247	Mm.426558	NM_028479	ENSMUSG00000027569	Mrgbp	1600027N09Rik|AW060503|C80444	MRG/MORF4L binding protein	protein-coding
common_peak1-17702-172-301--0.0597820600431849-0.345490796698964	chr7	73616193	73619651	+	0	NA	Intergenic	ORR1D2|LTR|MaLR	-45559	NM_053080	56847	Mm.140988	NM_053080	ENSMUSG00000015134	Aldh1a3	ALDH6|RALDH3|V1	aldehyde dehydrogenase family 1, subfamily A3	protein-coding
common_peak2-25261-43-78--0.5212175626534-1.16907810239195	chr18	67244957	67245986	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	-2481	NM_177137	14680	Mm.440746	NM_010307	ENSMUSG00000024524	Gnal	2610011C15Rik|9630020G10Rik|Galphaolf|Gna10|Golf	guanine nucleotide binding protein, alpha stimulating, olfactory type	protein-coding
unique_peak2-37214-10-15--0.643584654991231-0.519648556297791	chr4	83323467	83324253	+	0	NA	intron (NM_001081012, intron 16 of 25)	MTA_Mm|LTR|MaLR	152411	NM_001081012	320226	Mm.180032	NM_029117	ENSMUSG00000052407	Ccdc171	4930418J05Rik|4930473A06Rik|A330015D16Rik	coiled-coil domain containing 171	protein-coding
common_peak1-14108-26-18-0.679971578714877-0.959433126956265	chr2	126948312	126949173	+	0	NA	intron (NM_144818, intron 7 of 17)	intron (NM_144818, intron 7 of 17)	10948	NM_144818	215387	Mm.29786	NM_144818	ENSMUSG00000034906	Ncaph	A730011O11Rik|Brrn1|HCAP-H|mKIAA0074	non-SMC condensin I complex, subunit H	protein-coding
common_peak2-24328-28-20-0.660641697042702-1.00055860626307	chr17	88440736	88441829	+	0	NA	intron (NM_001081034, intron 1 of 22)	intron (NM_001081034, intron 1 of 22)	23343	NM_001081034	225055	Mm.386857	NM_001081034	ENSMUSG00000005371	Fbxo11	C80048|Jf	F-box protein 11	protein-coding
common_peak2-24004-47-72--0.25498313411347-0.498810849059171	chr16	20715950	20717878	+	0	NA	promoter-TSS (NM_009900)	promoter-TSS (NM_009900)	-205	NM_009900	12724	Mm.177761	NM_009900	ENSMUSG00000022843	Clcn2	AL118368|ClC-2|Clc2|nmf240	chloride channel 2	protein-coding
common_peak1-14804-28-34--0.0763238971235038-0.304271119602326	chr3	90231403	90232499	+	0	NA	intron (NM_178876, intron 1 of 30)	B1_Mur4|SINE|Alu	5607	NM_145540	229543	Mm.268564	NM_145540	ENSMUSG00000027933	Ints3	C77668	integrator complex subunit 3	protein-coding
unique_peak2-35166-6-14--1.34149248522822-1.01572999746118	chr16	34690453	34691102	+	0	NA	promoter-TSS (NM_172824)	promoter-TSS (NM_172824)	75	NM_172824	239839	Mm.272045	NM_172824	ENSMUSG00000022833	Ccdc14	G630039H03Rik	coiled-coil domain containing 14	protein-coding
common_peak2-25997-49-48-0.391573978909975-0.799068699966534	chr19	55315402	55316858	+	0	NA	promoter-TSS (NM_001081076)	promoter-TSS (NM_001081076)	-404	NM_001081076	73707	Mm.489987	NM_001081076	ENSMUSG00000055523	Gucy2g	2410077I05Rik|GC-G	guanylate cyclase 2g	protein-coding
common_peak2-27980-33-36-0.121884196896579-0.346766333527252	chr4	43442898	43443829	+	0	NA	Intergenic	Intergenic	-1357	NM_001162381	329831	Mm.454466	NM_177377	ENSMUSG00000042788	Fam166b	4833436C18Rik	family with sequence similarity 166, member B	protein-coding
common_peak2-21819-52-47-0.523297489544543-1.21256932621262	chr11	119491030	119492109	+	0	NA	intron (NM_028898, intron 1 of 33)	intron (NM_028898, intron 1 of 33)	27260	NM_028898	74370	Mm.209933	NM_028898	ENSMUSG00000025583	Rptor	4932417H02Rik|Rap|Raptor|mKIAA1303	regulatory associated protein of MTOR, complex 1	protein-coding
unique_peak2-32494-5-12--1.40482005414695-1.62698961692433	chr1	44042202	44042759	+	0	NA	intron (NM_009418, intron 24 of 29)	intron (NM_009418, intron 24 of 29)	34371	NM_001013799	433294	Mm.123621	NM_001013799	ENSMUSG00000047343	Mettl21c	A530098C11Rik	methyltransferase like 21C	protein-coding
common_peak2-22564-31-50--0.447186671158372-0.724428647890298	chr13	63431216	63432265	+	0	NA	intron (NM_001042673, intron 10 of 15)	intron (NM_001042673, intron 10 of 15)	-29149	NR_037235	100526474		NR_037235		Mir3074-1	mmu-mir-3074-1	microRNA 3074-1	ncRNA
common_peak1-15931-33-62--0.645942360974388-1.33955643568472	chr5	25222435	25223698	+	0	NA	Intergenic	ORR1E|LTR|MaLR	-11451	NM_020570	57434	Mm.143767	NM_020570	ENSMUSG00000028933	Xrcc2	4921524O04Rik|8030409M04Rik|RAD51|RecA	X-ray repair complementing defective repair in Chinese hamster cells 2	protein-coding
common_peak2-32301-18-32--0.731474968130102-0.907815120698057	chrX	42067840	42068890	+	0	NA	Intergenic	Intergenic	74973	NM_001190718	245404	Mm.55685	NM_178739	ENSMUSG00000045284	Dcaf12l1	9330180J20|A230038L21Rik|Decaf12l1|Wdr40b	DDB1 and CUL4 associated factor 12-like 1	protein-coding
common_peak1-18042-31-50--0.447186671158372-0.724428647890298	chr7	144469789	144470853	+	0	NA	intron (NM_010096, intron 6 of 15)	intron (NM_010096, intron 6 of 15)	35807	NM_001113415	13593	Mm.258708	NM_010096	ENSMUSG00000010476	Ebf3	3110018A08Rik|O/E-2|mKIAA4201	early B cell factor 3	protein-coding
unique_peak2-34376-3-10--1.87341470859657-1.75805390616669	chr13	114460197	114460759	+	0	NA	Intergenic	Intergenic	-6594	NM_019960	56534	Mm.41410	NM_019960	ENSMUSG00000051456	Hspb3	2310035K17Rik|AI844863|Hsbp3|spb3	heat shock protein 3	protein-coding
common_peak1-15369-12-14--0.25811461052088-0.309074325783021	chr4	59239488	59240006	+	0	NA	Intergenic	Intergenic	-33176	NR_105031	101055769	Mm.421401	NR_105031		LOC101055769	-	uncharacterized LOC101055769	ncRNA
unique_peak1-4258-11-3-1.50869358425161-1.95434855131066	chr2	130875957	130876519	+	0	NA	TTS (NM_001163529)	TTS (NM_001163529)	-7414	NM_001136063	14588	Mm.198399	NM_020014	ENSMUSG00000027316	Gfra4	AW060733|G630015H18Rik	glial cell line derived neurotrophic factor family receptor alpha 4	protein-coding
unique_peak2-35941-4-6--0.830815435910851-0.989110657569874	chr19	9069895	9070216	+	0	NA	intron (NR_104460, intron 1 of 6)	Tigger16a|DNA|Tigger	6281	NM_001286518	66395	Mm.203866	NM_009643	ENSMUSG00000069833	Ahnak	DY6	AHNAK nucleoprotein (desmoyokin)	protein-coding
unique_peak1-6022-10-1-2.35641534500877-2.57096726280955	chr6	112701692	112702304	+	0	NA	intron (NM_080448, intron 12 of 21)	intron (NM_080448, intron 12 of 21)	-55334	NM_001167730	58186	Mm.103812	NM_021385	ENSMUSG00000030254	Rad18	2810024C04Rik|Rad18sc	RAD18 homolog (S. cerevisiae)	protein-coding
common_peak1-12695-13-18--0.469455482805817-0.409888142029227	chr18	42052164	42052854	+	0	NA	intron (NM_029942, intron 5 of 6)	intron (NM_029942, intron 5 of 6)	58339	NM_029942	77619	Mm.30649	NM_029942	ENSMUSG00000056671	Prelid2	1700003A01Rik|C330008K14Rik	PRELI domain containing 2	protein-coding
unique_peak1-1597-10-5-0.771452844287613-1.33892459842472	chr13	36001458	36001965	+	0	NA	Intergenic	Intergenic	-3495	NM_145938	208366	Mm.35545	NM_145938		Rpp40	D8Bwg1265e|Rnasep1	ribonuclease P 40 subunit	protein-coding
unique_peak2-35159-4-11--1.6084230145744-1.68134727924692	chr16	33988756	33989300	+	0	NA	intron (NM_177357, intron 54 of 59)	intron (NM_177357, intron 54 of 59)	-21939	NM_009471	22247	Mm.13145	NM_009471	ENSMUSG00000022814	Umps	1700095D23Rik|AA408257|AL033308|BB164745	uridine monophosphate synthetase	protein-coding
unique_peak1-1444-17-0-4.21829633820504-6.02059991327962	chr12	100789531	100790273	+	0	NA	Intergenic	Intergenic	76282	NR_045288	73457	Mm.383439	NR_045288		1700064M15Rik	-	RIKEN cDNA 1700064M15 gene	ncRNA
common_peak1-12151-53-65-0.0965788930574751-0.358528808455797	chr17	28328378	28329586	+	0	NA	intron (NM_172617, intron 3 of 14)	intron (NM_172617, intron 3 of 14)	14619	NM_172617	224656	Mm.267359	NM_172617	ENSMUSG00000024220	Zfp523	2810027J07|BC025615|Znf76	zinc finger protein 523	protein-coding
common_peak2-28807-36-30-0.525124775780879-0.956885677565404	chr5	64812226	64813272	+	0	NA	Intergenic	L1MC1|LINE|L1	46432	NR_040681	69999	Mm.261413	NR_040681		1700027F09Rik	-	RIKEN cDNA 1700027F09 gene	ncRNA
unique_peak2-33773-10-31--1.64358465499123-2.75133420124051	chr11	118354482	118355439	+	0	NA	intron (NM_001039167, intron 14 of 14)	intron (NM_001039167, intron 14 of 14)	16686	NM_172573	217364	Mm.473963	NM_172573	ENSMUSG00000033857	Engase	C130099A03|D230014K01Rik	endo-beta-N-acetylglucosaminidase	protein-coding
common_peak2-28988-14-13-0.0918612383000403-0.332077462497413	chr5	107437842	107438186	+	0	NA	Intergenic	L1VL4|LINE|L1	44434	NM_001271566	12545	Mm.20842	NM_009863	ENSMUSG00000029283	Cdc7	AI597260|Cdc7l1|muCdc7	cell division cycle 7 (S. cerevisiae)	protein-coding
common_peak1-14659-14-18--0.348711353085941-0.360333814299795	chr3	58372002	58372485	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-8337	NM_001040396	69227	Mm.270950	NM_001040396	ENSMUSG00000075700	Selt	2810407C02Rik|5730408P04Rik	selenoprotein T	protein-coding
common_peak1-14966-8-11--0.579740082773585-1.14218153353838	chr3	105059104	105059599	+	0	NA	Intergenic	Intergenic	189589	NM_029228	75269	Mm.307994	NM_029228	ENSMUSG00000051788	4930564D02Rik	-	RIKEN cDNA 4930564D02 gene	protein-coding
common_peak1-17308-55-29-1.29772927554418-4.71757460358329	chr6	138140186	138141922	+	0	NA	Intergenic	Intergenic	51996	NM_019946	56615	Mm.14796	NM_019946	ENSMUSG00000008540	Mgst1	1500002K10Rik|Gst	microsomal glutathione S-transferase 1	protein-coding
common_peak2-28053-15-14-0.105274154947137-0.330004445983672	chr4	59239421	59240060	+	0	NA	Intergenic	Intergenic	-33183	NR_105031	101055769	Mm.421401	NR_105031		LOC101055769	-	uncharacterized LOC101055769	ncRNA
common_peak2-26777-58-46-0.741361083212859-2.21542829695182	chr2	144187490	144189420	+	0	NA	Intergenic	RMER1C|Other|Other	-6264	NM_001164813	100048644	Mm.227925	NM_001164813		Pet117	Gm20571	PET117 homolog (S. cerevisiae)	protein-coding
unique_peak1-4379-7-1-1.79909083029819-1.80617997398389	chr2	160067126	160067492	+	0	NA	Intergenic	Intergenic	85921	NM_001033411	329554	Mm.291144	NM_001033411		Gm826	-	predicted gene 826	protein-coding
unique_peak2-34942-6-15--1.4346018896197-1.16633110333236	chr15	89149028	89149594	+	0	NA	Intergenic	Intergenic	-3569	NM_001170561	77980	Mm.35483	NM_030019	ENSMUSG00000036529	Sbf1	2610510A08Rik|B230113C15Rik|Mtmr5|mKIAA3020	SET binding factor 1	protein-coding
common_peak2-25850-127-127-0.651386511328057-3.95772793894375	chr19	42128239	42130907	+	0	NA	intron (NM_026152, intron 1 of 6)	B4|SINE|B4	2855	NM_025752	66765	Mm.440412	NM_025752	ENSMUSG00000090369	4933411K16Rik	-	RIKEN cDNA 4933411K16 gene	protein-coding
common_peak1-16652-151-96-1.35222806981362-15.4012994761674	chr6	99170580	99174657	+	0	NA	intron (NM_053202, intron 3 of 18)	B3A|SINE|B2	43891	NM_001197321	108655	Mm.234965	NM_053202	ENSMUSG00000030067	Foxp1	3110052D19Rik|4932443N09Rik|AI461938|AW494214	forkhead box P1	protein-coding
unique_peak2-38517-5-8--0.874305337448166-1.10484139239135	chr7	45434938	45435509	+	0	NA	Intergenic	Intergenic	1084681	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak1-15957-58-39-0.974021840003134-3.30455250786927	chr5	30999609	31001361	+	0	NA	Intergenic	Intergenic	-13783	NM_023047	65254	Mm.27732	NM_023047	ENSMUSG00000029168	Dpysl5	CRAM|CRMP-5|Crmp5	dihydropyrimidinase-like 5	protein-coding
unique_peak1-6583-7-1-1.79909083029819-1.80617997398389	chr7	142480822	142481334	+	0	NA	Intergenic	(TCTCC)n|Simple_repeat|Simple_repeat	20776	NM_001163611	100043254	Mm.192092	NM_001163611	ENSMUSG00000073804	Nps	ENSMUSG00000073804	neuropeptide S	protein-coding
common_peak1-17434-39-63--0.384238753080846-0.682033507942409	chr7	16098374	16099466	+	0	NA	Intergenic	Lx3A|LINE|L1	-33686	NM_027802	71468	Mm.415195	NM_027802	ENSMUSG00000054310	Obox1	7420700M11Rik|AU015708|AU024152	oocyte specific homeobox 1	protein-coding
common_peak2-26982-47-8-2.76491642332424-10.3213522672004	chr2	167764918	167765350	+	0	NA	intron (NM_011201, intron 1 of 8)	intron (NM_011201, intron 1 of 8)	7307	NM_011201	19246	Mm.277916	NM_011201	ENSMUSG00000027540	Ptpn1	PTP-1B|PTP-HA2|PTP1B	protein tyrosine phosphatase, non-receptor type 1	protein-coding
common_peak1-17139-47-73--0.274611940862402-0.534695158203301	chr6	116207235	116208876	+	0	NA	intron (NM_026585, intron 28 of 30)	B3|SINE|B2	-6182	NM_001290338	67492	Mm.272772	NM_001081317	ENSMUSG00000042213	Zfand4	Anubl1	zinc finger, AN1-type domain 4	protein-coding
unique_peak2-39955-2-7--1.91745425626332-1.45399745587252	chrX	140520622	140520974	+	0	NA	Intergenic	L1VL2|LINE|L1	-67440	NR_040271	319764	Mm.208482	NR_040271	ENSMUSG00000085139	A730046J19Rik	-	RIKEN cDNA A730046J19 gene	ncRNA
common_peak2-28939-10-14--0.550475250599749-0.446472590016315	chr5	98940609	98941230	+	0	NA	intron (NM_001024614, intron 3 of 5)	intron (NM_001024614, intron 3 of 5)	-36236	NR_030484	735265		NR_030484		Mir703	Mirn703|mmu-mir-703	microRNA 703	ncRNA
unique_peak2-35552-3-8--1.58390809140159-1.39487600375387	chr17	64332385	64332782	+	0	NA	intron (NM_008000, intron 6 of 13)	L1Md_F2|LINE|L1	45262	NM_008000	14158	Mm.23039	NM_008000	ENSMUSG00000000127	Fert2	AV082135|C330004K01Rik|Fer|Fert	fer (fms/fps related) protein kinase, testis specific 2	protein-coding
common_peak2-23418-19-27--0.404667595395917-0.464317215211849	chr15	60823887	60825076	+	0	NA	Intergenic	MTC|LTR|MaLR	-71656	NM_001081067	117586	Mm.291499	NM_001081067	ENSMUSG00000022347	A1bg	C44	alpha-1-B glycoprotein	protein-coding
unique_peak2-34062-6-8--0.60452689106201-1.03789460276074	chr13	45907702	45908124	+	0	NA	intron (NM_009124, intron 3 of 7)	intron (NM_009124, intron 3 of 7)	152447	NM_001199304	20238	Mm.342683	NM_009124	ENSMUSG00000046876	Atxn1	2900016G23Rik|Atx1|C85907|ENSMUSG00000074917|Gm10786|Sca1	ataxin 1	protein-coding
common_peak2-23929-22-49--0.99657208468732-2.02221055290443	chr16	11133955	11134638	+	0	NA	intron (NM_029582, intron 1 of 11)	CpG	329	NM_029582	106200	Mm.291015	NM_029582	ENSMUSG00000022498	Txndc11	2810408E11Rik|AI427833|EFP1|Txdc11	thioredoxin domain containing 11	protein-coding
unique_peak2-34827-2-8--2.08737925770563-1.65811743852845	chr15	75000301	75000820	+	0	NA	Intergenic	L1Md_A|LINE|L1	-58181	NM_001099217	100041546	Mm.482110	NM_001099217	ENSMUSG00000022584	Ly6c2	Ly-6C.2|Ly-6C2	lymphocyte antigen 6 complex, locus C2	protein-coding
unique_peak1-3641-10-4-1.03448725012141-1.5150158574804	chr19	38088898	38089464	+	0	NA	intron (NM_001099634, intron 3 of 52)	intron (NM_001099634, intron 3 of 52)	28886	NM_001099634	226101	Mm.34674	NM_177035	ENSMUSG00000048612	Myof	2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3	myoferlin	protein-coding
common_peak2-20075-19-44--1.08916576966799-2.1071344868417	chr1	153332160	153333808	+	0	NA	intron (NM_011277, intron 1 of 6)	intron (NM_011277, intron 1 of 6)	14969	NM_011277	19821	Mm.474038	NM_011277	ENSMUSG00000026484	Rnf2	AI326319|AI450156|AU019207|Ring1B|dinG	ring finger protein 2	protein-coding
common_peak1-12542-19-10-0.943255708024389-1.16735254179725	chr18	5414242	5415208	+	0	NA	Intergenic	Intergenic	-80288	NM_178722	240186	Mm.118257	NM_178722	ENSMUSG00000050945	Zfp438	9430031G09|9430091M14Rik|B830013J05Rik	zinc finger protein 438	protein-coding
unique_peak1-5715-49-8-2.83635882158287-11.0674881713236	chr6	41026085	41027573	+	0	NA	Intergenic	Intergenic	-41321	NM_023333	67373	Mm.153729	NM_023333	ENSMUSG00000029882	2210010C04Rik	AV072249	RIKEN cDNA 2210010C04 gene	protein-coding
unique_peak1-6875-15-3-2.01216475055566-3.03427613622886	chr8	89811408	89812098	+	0	NA	Intergenic	MLT-int|LTR|MaLR	-88004	NR_040697	100038706	Mm.334690	NR_040697	ENSMUSG00000099207	Gm10637	ENSMUSG00000074176	predicted gene 10637	ncRNA
common_peak1-12441-47-117--0.947801624595294-4.19247457282723	chr17	79614882	79615801	+	0	NA	Intergenic	Intergenic	139090	NM_026514	260409	Mm.140601	NM_026514	ENSMUSG00000036533	Cdc42ep3	3200001F04Rik|AA986861|Borg2|Cep3|UB1	CDC42 effector protein (Rho GTPase binding) 3	protein-coding
common_peak1-10750-10-15--0.643584654991231-0.519648556297791	chr14	69498816	69499493	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-148192	NM_009285	20855	Mm.20911	NM_009285	ENSMUSG00000014813	Stc1	Stc	stanniocalcin 1	protein-coding
common_peak1-12896-24-23-0.208247402046561-0.407645899519042	chr18	82491689	82492788	+	0	NA	Intergenic	ORR1C2|LTR|MaLR	83931	NM_008082	14427	Mm.6219	NM_008082	ENSMUSG00000024553	Galr1	Galnr1	galanin receptor 1	protein-coding
common_peak2-20479-10-10--0.103016273628528-0.301029995663987	chr10	44267396	44268063	+	0	NA	Intergenic	T-rich|Low_complexity|Low_complexity	-89236	NM_007548	12142	Mm.4800	NM_007548	ENSMUSG00000038151	Prdm1	Blimp-1|Blimp1|PRDI-BF1|ZNFPR1A1|b2b1765Clo	PR domain containing 1, with ZNF domain	protein-coding
unique_peak2-37047-2-12--2.61789397440441-2.55640854263862	chr3	135249094	135249457	+	0	NA	intron (NM_008689, intron 24 of 24)	intron (NM_008689, intron 24 of 24)	100700	NM_027288	110173	Mm.280536	NM_027288	ENSMUSG00000028164	Manba	2410030O07Rik|B930014J03Rik|Bmn	mannosidase, beta A, lysosomal	protein-coding
unique_peak1-546-24-8-1.6232849013254-2.85636458546265	chr1	191497870	191498985	+	0	NA	intron (NM_001081363, intron 7 of 17)	RSINE1|SINE|B4	13538	NM_001081363	108000	Mm.129746	NM_001081363	ENSMUSG00000026605	Cenpf	6530404A22Rik|AI325968|CENF|Lek1|PRO1779|mitosin	centromere protein F	protein-coding
common_peak2-29696-12-6-0.841421063030034-1.58711810488664	chr6	82753049	82753557	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	-28855	NM_013820	15277	Mm.255848	NM_013820	ENSMUSG00000000628	Hk2	AI642394|HKII	hexokinase 2	protein-coding
unique_peak2-36791-6-5--0.0195643903408542-0.947717972411649	chr3	80866961	80867377	+	0	NA	intron (NM_019971, intron 1 of 5)	intron (NM_019971, intron 1 of 5)	26831	NM_019971	54635	Mm.331089	NM_019971	ENSMUSG00000028019	Pdgfc	1110064L01Rik|AI647969|PDGF-C	platelet-derived growth factor, C polypeptide	protein-coding
unique_peak2-35546-2-7--1.91745425626332-1.45399745587252	chr17	57250270	57250713	+	0	NA	Intergenic	(TTCC)n|Simple_repeat|Simple_repeat	-5126	NR_033508	100169874	Mm.76700	NR_033508	ENSMUSG00000079414	Gm11110	ENSMUSG00000079414	predicted gene 11110	ncRNA
common_peak1-13379-14-6-1.09186123830004-1.16633110333236	chr19	46489494	46490050	+	0	NA	intron (NM_001025391, intron 2 of 11)	intron (NM_001025391, intron 2 of 11)	18386	NM_015752	24069	Mm.41210	NM_015752	ENSMUSG00000025231	Sufu	Su(fu)	suppressor of fused homolog (Drosophila)	protein-coding
common_peak1-8492-8-14--0.901668177660948-0.660903317613906	chr10	80960745	80961219	+	0	NA	3' UTR (NM_010102, exon 1 of 1)	3' UTR (NM_010102, exon 1 of 1)	-1874	NM_134009	103425	Mm.302791	NM_134009	ENSMUSG00000020238	Ncln	3100002P13Rik|AW120537	nicalin homolog (zebrafish)	protein-coding
unique_peak1-2707-6-1-1.5653981103803-1.56314192529759	chr16	91618346	91618866	+	0	NA	intron (NM_138664, intron 1 of 1)	intron (NM_138664, intron 1 of 1)	638	NM_001099738	246738	Mm.101927	NM_138664	ENSMUSG00000039763	Dnajc28	BC020175|ORF28	DnaJ (Hsp40) homolog, subfamily C, member 28	protein-coding
common_peak2-20510-33-60--0.599399775037358-1.1755042381992	chr10	59879502	59880402	+	0	NA	intron (NR_045556, intron 22 of 68)	ORSL-2b|DNA|Tip100	17478	NM_001164374	100302688	Mm.444135	NM_001164374	ENSMUSG00000090439	Gm17455	-	predicted gene, 17455	protein-coding
unique_peak2-38380-2-6--1.72480917832092-1.26211192963361	chr7	16296949	16297374	+	0	NA	Intergenic	Lx3A|LINE|L1	-38558	NM_145709	252829	Mm.222738	NM_145709		Obox5	C87544	oocyte specific homeobox 5	protein-coding
unique_peak2-33312-0-8--4.01005593191652-2.05605744720049	chr11	6011288	6011570	+	0	NA	intron (NM_173748, intron 5 of 5)	intron (NM_173748, intron 5 of 5)	-45678	NM_007595	12323	Mm.439733	NM_007595	ENSMUSG00000057897	Camk2b	Camk2d	calcium/calmodulin-dependent protein kinase II, beta	protein-coding
common_peak2-19566-70-131--0.424427202983055-1.33726869565092	chr1	10231581	10233497	+	0	NA	Intergenic	Intergenic	-9788	NM_001102430	211673	Mm.229141	NM_001102430	ENSMUSG00000067851	Arfgef1	ARFGEP1|BIG1|D130059B05Rik|D730028O18Rik|P200	ADP-ribosylation factor guanine nucleotide-exchange factor 1(brefeldin A-inhibited)	protein-coding
common_peak2-23755-15-11-0.4272022498345-0.503257505534083	chr15	97839008	97839440	+	0	NA	Intergenic	Intergenic	-4069	NM_001113515	12824	Mm.2423	NM_031163	ENSMUSG00000022483	Col2a1	Col2|Col2a|Col2a-1|Del1|Dmm|Lpk|M100856|Rgsc856	collagen, type II, alpha 1	protein-coding
unique_peak2-32809-7-5-0.214128329577033-1.01466476204226	chr1	184060141	184060528	+	0	NA	intron (NM_012058, intron 2 of 2)	ORR1A2|LTR|MaLR	5466	NM_012058	27058	Mm.303071	NM_012058	ENSMUSG00000026511	Srp9	9kDa	signal recognition particle 9	protein-coding
common_peak2-23276-17-21--0.24113528043226-0.322753776620787	chr15	27527389	27528469	+	0	NA	Intergenic	Intergenic	26680	NR_106065	102466808		NR_106065		Mir7117	mmu-mir-7117	microRNA mir-7117	ncRNA
unique_peak2-33663-8-12--0.695217300193522-0.475924844171029	chr11	100622926	100623560	+	0	NA	exon (NM_010410, exon 2 of 2)	exon (NM_010410, exon 2 of 2)	1002	NM_010410	15171	Mm.10096	NM_010410	ENSMUSG00000045471	Hcrt	PPOX	hypocretin	protein-coding
unique_peak1-6996-11-6-0.701338662194009-1.32595962126035	chr8	122149144	122149657	+	0	NA	3' UTR (NM_025734, exon 3 of 3)	3' UTR (NM_025734, exon 3 of 3)	10180	NM_025734	66733	Mm.358699	NM_025734	ENSMUSG00000045246	Kcng4	4921535I01Rik|AW049024|KV6.3|KV6.4	potassium voltage-gated channel, subfamily G, member 4	protein-coding
common_peak1-16956-24-30--0.160986407619158-0.316008636696545	chr6	85137373	85138234	+	0	NA	promoter-TSS (NM_010131)	promoter-TSS (NM_010131)	-122	NM_010131	13796	Mm.391473	NM_010131		Emx1	-	empty spiracles homeobox 1	protein-coding
unique_peak1-3234-9-0-3.18961340640422-3.01029995663981	chr18	61836866	61837300	+	0	NA	Intergenic	Intergenic	-10506	NM_019508	56069	Mm.59313	NM_019508	ENSMUSG00000024578	Il17b	1110006O16Rik|1700006N07Rik|Zcyto7	interleukin 17B	protein-coding
common_peak2-25543-51-46-0.520334973924935-1.1534274303752	chr19	6046542	6047741	+	0	NA	promoter-TSS (NM_001164709)	promoter-TSS (NM_001164709)	-4	NM_001164709	74126	Mm.149870	NM_028769	ENSMUSG00000024807	Syvn1	1200010C09Rik|AW211966|C85322|D530017H19Rik|Hrd1	synovial apoptosis inhibitor 1, synoviolin	protein-coding
common_peak2-29635-19-24--0.241168863113038-0.344491671143527	chr6	57691310	57692246	+	0	NA	Intergenic	L1Md_F2|LINE|L1	39329	NM_133737	71835	Mm.274904	NM_133737		Lancl2	1700003F10Rik	LanC (bacterial lantibiotic synthetase component C)-like 2	protein-coding
unique_peak2-34441-1-7--2.62705701021674-1.80617997398389	chr14	21848492	21848894	+	0	NA	intron (NM_009502, intron 19 of 20)	intron (NM_009502, intron 19 of 20)	22971	NM_018829	55946	Mm.376269	NM_018829		Ap3m1	1200013D09Rik|C78982|R75378	adaptor-related protein complex 3, mu 1 subunit	protein-coding
common_peak1-10300-7-18--1.4488366831454-1.38887104242188	chr13	64153833	64154297	+	0	NA	Intergenic	MTD-int|LTR|MaLR	36444	NM_008291	15487	Mm.5109	NM_008291	ENSMUSG00000033122	Hsd17b3	-	hydroxysteroid (17-beta) dehydrogenase 3	protein-coding
common_peak1-17679-29-27-0.304935158557507-0.525808162491371	chr7	66375357	66376780	+	0	NA	Intergenic	RMER6B|LTR|ERVK	-108052	NM_173010	22215	Mm.9002	NM_011668	ENSMUSG00000025326	Ube3a	4732496B02|5830462N02Rik|A130086L21Rik|Hpve6a|mKIAA4216	ubiquitin protein ligase E3A	protein-coding
unique_peak2-39578-3-6--1.22133801201688-1.08602067057793	chr9	75526431	75526865	+	0	NA	intron (NM_009130, intron 4 of 11)	intron (NM_009130, intron 4 of 11)	5215	NM_001164790	20255	Mm.2386	NM_009130	ENSMUSG00000032181	Scg3	1B1075|AI385542|Chgd|SgIII	secretogranin III	protein-coding
common_peak1-16800-27-9-1.66961785600787-3.27210358356897	chr6	43636836	43637870	+	0	NA	Intergenic	Kanga1|DNA|Tc2	-21179	NM_013861	29807	Mm.320979	NM_013861	ENSMUSG00000029735	Tpk1	-	thiamine pyrophosphokinase	protein-coding
common_peak2-22892-24-32--0.251184216590737-0.358978896303361	chr14	32084821	32085833	+	0	NA	intron (NM_001033668, intron 54 of 77)	intron (NM_001033668, intron 54 of 77)	20652	NM_027088	104416	Mm.3779	NM_027088	ENSMUSG00000021901	Bap1	2300006C11Rik|AA989761|AW553466|mKIAA0272|uch-x4	Brca1 associated protein 1	protein-coding
common_peak1-15074-19-14-0.495796731053168-0.607095980551316	chr3	126830554	126831466	+	0	NA	Intergenic	Intergenic	-33213	NR_105030	100862268	Mm.444603	NR_105029	ENSMUSG00000097456	LOC100862268	-	uncharacterized LOC100862268	ncRNA
common_peak2-31343-45-22-1.33679606928786-3.94835329416591	chr8	84183452	84184323	+	0	NA	intron (NM_001297596, intron 2 of 24)	Lx6|LINE|L1	317426	NM_001297593	234515	Mm.324468	NM_001024617	ENSMUSG00000037940	Inpp4b	E130107I17Rik	inositol polyphosphate-4-phosphatase, type II	protein-coding
common_peak2-27666-66-117--0.364159384936-0.951951232317808	chr3	108910975	108912402	+	0	NA	intron (NM_029054, intron 6 of 9)	MLT1A1|LTR|MaLR	-14379	NM_172685	229731	Mm.33574	NM_172685	ENSMUSG00000040322	Slc25a24	2610016M12Rik	solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 24	protein-coding
common_peak1-12716-13-7-0.778472030637769-0.817533494790411	chr18	50010675	50011212	+	0	NA	intron (NM_001081371, intron 5 of 42)	intron (NM_001081371, intron 5 of 42)	18292	NM_001081371	240283	Mm.257790	NM_001081371	ENSMUSG00000037416	Dmxl1	C630007L23Rik|D030030C22	Dmx-like 1	protein-coding
common_peak1-19418-28-32-0.00856500046300912-0.30437085424443	chrX	74245615	74246508	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-397798	NM_001201395	74987	Mm.107996	NM_001201395	ENSMUSG00000079525	4930468A15Rik	-	RIKEN cDNA 4930468A15 gene	protein-coding
unique_peak1-2700-9-2-1.60465090568306-1.87199725847353	chr16	87496237	87496676	+	0	NA	promoter-TSS (NM_009840)	promoter-TSS (NM_009840)	138	NR_040375	414095	Mm.166361	NR_040375	ENSMUSG00000093606	B130034C11Rik	-	RIKEN cDNA B130034C11 gene	ncRNA
common_peak1-19500-10-20--1.03590207776999-1.03889213727317	chrX	162887891	162888468	+	0	NA	intron (NM_025432, intron 3 of 4)	B2_Mm2|SINE|B2	9422	NM_025432	66226	Mm.279752	NM_025432		Trappc2	1110066L09Rik|1810064C02Rik|AW496358|MIP-2A|Sedl|TRS20	trafficking protein particle complex 2	protein-coding
common_peak1-11507-21-10-1.11005764662894-1.59083646988122	chr16	8863297	8864293	+	0	NA	Intergenic	Intergenic	33602	NM_001081400	69053	Mm.390868	NM_001081400	ENSMUSG00000022507	1810013L24Rik	1110017P05Rik|3010002C02Rik|AA792997|AW124177|Gm19906|R74903	RIKEN cDNA 1810013L24 gene	protein-coding
common_peak2-19700-22-12-0.946844386946312-1.31435121412491	chr1	61638632	61639349	+	0	NA	Intergenic	Intergenic	-46408	NM_001081050	72823	Mm.35153	NM_001081050	ENSMUSG00000052062	Pard3b	1810008K04Rik|2010002N16Rik|2810455B10Rik|Als2cr19|PAR3B|PAR3L|PAR3beta	par-3 family cell polarity regulator beta	protein-coding
unique_peak2-38735-1-4--1.94898510510411-1.10720996964787	chr7	112663608	112664042	+	0	NA	Intergenic	Intergenic	-33114	NM_028444	109042	Mm.3124	NM_028444	ENSMUSG00000037060	Prkcdbp	3110015B12Rik|6330514M23Rik|SRBC	protein kinase C, delta binding protein	protein-coding
unique_peak2-35522-5-9--1.02630843089322-1.21398586181642	chr17	50643096	50643613	+	0	NA	Intergenic	Intergenic	-5518	NM_013880	224860	Mm.217362	NM_013880	ENSMUSG00000038910	Plcl2	PLC-L2|PRIP-2|Plce2|mKIAA1092	phospholipase C-like 2	protein-coding
common_peak2-23715-4-8--1.19338551529556-1.21878474469819	chr15	89430379	89430754	+	0	NA	Intergenic	Lx|LINE|L1	-8212	NM_026817	68708	Mm.23258	NM_026817	ENSMUSG00000022621	Rabl2	1110031N17Rik|AW549303|Rabl2a	RAB, member RAS oncogene family-like 2	protein-coding
common_peak2-29247-4-11--1.6084230145744-1.68134727924692	chr5	139484600	139485037	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-13911	NM_008808	18590	Mm.2675	NM_008808	ENSMUSG00000025856	Pdgfa	-	platelet derived growth factor, alpha	protein-coding
unique_peak2-32891-2-11--2.50241675698448-2.32232533660526	chr10	13967906	13968166	+	0	NA	Intergenic	L1Md_F2|LINE|L1	281851	NM_010437	15273	Mm.42157	NM_010437	ENSMUSG00000015501	Hivep2	MIBP1|Schnurri-2|Shn-2	human immunodeficiency virus type I enhancer binding protein 2	protein-coding
common_peak2-27742-14-12-0.198776442216552-0.373562084705529	chr3	126830934	126831555	+	0	NA	Intergenic	Intergenic	-32979	NR_105030	100862268	Mm.444603	NR_105029	ENSMUSG00000097456	LOC100862268	-	uncharacterized LOC100862268	ncRNA
unique_peak2-36138-2-15--2.91745425626332-3.28500101358144	chr2	16028076	16028760	+	0	NA	Intergenic	L1Md_A|LINE|L1	-249513	NM_026162	67448	Mm.313938	NM_026162	ENSMUSG00000026748	Plxdc2	1200007L24Rik|5430431D22Rik|AI646728|AU022916|AV231634|Tem7r	plexin domain containing 2	protein-coding
unique_peak2-35480-10-21--1.10301627362853-1.16735254179725	chr17	44738073	44739010	+	0	NA	intron (NR_073425, intron 5 of 5)	intron (NR_073425, intron 5 of 5)	134584	NR_073425	12393	Mm.391013	NM_009820	ENSMUSG00000039153	Runx2	AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a	runt related transcription factor 2	protein-coding
common_peak1-12726-9-22--1.33394854965279-1.52222891542741	chr18	53522030	53522475	+	0	NA	intron (NM_029394, intron 3 of 6)	intron (NM_029394, intron 3 of 6)	55409	NM_008908	19038	Mm.4587	NM_008908	ENSMUSG00000024538	Ppic	CyP-20c	peptidylprolyl isomerase C	protein-coding
common_peak2-25218-13-10-0.319040412000471-0.446472590016315	chr18	61224321	61224838	+	0	NA	intron (NM_001146268, intron 5 of 22)	intron (NM_001146268, intron 5 of 22)	19775	NM_008809	18596	Mm.4146	NM_008809	ENSMUSG00000024620	Pdgfrb	AI528809|CD140b|PDGFR-1|Pdgfr	platelet derived growth factor receptor, beta polypeptide	protein-coding
unique_peak1-6004-6-2-0.980435609659146-1.26211192963361	chr6	104940245	104940701	+	0	NA	Intergenic	Intergenic	497435	NM_017383	53870	Mm.321671	NM_017383	ENSMUSG00000030092	Cntn6	NB-3	contactin 6	protein-coding
unique_peak2-33110-6-11--1.01956439034085-1.32595962126035	chr10	81059842	81060321	+	0	NA	intron (NM_053254, intron 4 of 13)	intron (NM_053254, intron 4 of 13)	3564	NM_053254	114606	Mm.206764	NM_053254	ENSMUSG00000034758	Tle6	1810057E06Rik|Grg6	transducin-like enhancer of split 6, homolog of Drosophila E(spl)	protein-coding
common_peak1-9427-39-33-0.528298405668814-0.983321682013132	chr11	101626462	101627563	+	0	NA	intron (NM_144831, intron 22 of 22)	intron (NM_144831, intron 22 of 22)	19612	NM_008815	18612	Mm.5025	NM_008815	ENSMUSG00000017724	Etv4	AW414408|Pea-3|Pea3	ets variant 4	protein-coding
common_peak2-25756-20-8-1.31814978314888-1.77631109801764	chr19	29470297	29470871	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-14825	NM_021396	58205	Mm.116737	NM_021396		Pdcd1lg2	B7-DC|Btdc|F730015O22Rik|PD-L2	programmed cell death 1 ligand 2	protein-coding
unique_peak2-34816-4-8--1.19338551529556-1.21878474469819	chr15	74919257	74919604	+	0	NA	Intergenic	Intergenic	22949	NM_001099217	100041546	Mm.482110	NM_001099217	ENSMUSG00000022584	Ly6c2	Ly-6C.2|Ly-6C2	lymphocyte antigen 6 complex, locus C2	protein-coding
common_peak2-21183-13-8-0.608547029195456-0.660903317613904	chr11	60113839	60114287	+	0	NA	intron (NM_153080, intron 1 of 14)	intron (NM_153080, intron 1 of 14)	52344	NM_153080	216810	Mm.218875	NM_153080	ENSMUSG00000000538	Tom1l2	2900016I08Rik|A730055F12Rik|AU042072|Srebf1	target of myb1-like 2 (chicken)	protein-coding
unique_peak2-37005-5-6--0.511735258063458-0.947717972411649	chr3	122208658	122208965	+	0	NA	intron (NM_013867, intron 4 of 11)	B1_Mus1|SINE|Alu	35788	NR_106117	102465764		NR_106117		Mir7657	mmu-mir-7657	microRNA mir-7657	ncRNA
unique_peak1-2316-12-2-2.06381348436648-2.79529063155376	chr15	82162624	82163320	+	0	NA	intron (NM_008669, intron 7 of 9)	intron (NM_008669, intron 7 of 9)	6284	NM_008669	17939	Mm.20325	NM_008669	ENSMUSG00000022453	Naga	-	N-acetyl galactosaminidase, alpha	protein-coding
common_peak1-18544-11-11--0.0762689164695427-0.301029995663976	chr8	94954751	94955322	+	0	NA	Intergenic	Intergenic	73341	NM_018826	54352	Mm.101153	NM_018826	ENSMUSG00000031737	Irx5	-	Iroquois related homeobox 5 (Drosophila)	protein-coding
unique_peak2-39611-8-12--0.695217300193522-0.475924844171029	chr9	86464379	86465013	+	0	NA	promoter-TSS (NM_001145968)	promoter-TSS (NM_001145968)	753	NM_001163746	109785	Mm.390201	NM_028352	ENSMUSG00000056131	Pgm3	2810473H05Rik|Agm1|BB187688|C77933|PAGM|Pgm-3	phosphoglucomutase 3	protein-coding
common_peak1-15934-69-18-2.34721493381515-13.2509911720417	chr5	25613543	25615638	+	0	NA	Intergenic	Intergenic	348746	NM_001004365	242894	Mm.150319	NM_001004365	ENSMUSG00000056367	Actr3b	9630005C02|ARP11|AW047569|Arp3b|Arp3beta	ARP3 actin-related protein 3B	protein-coding
common_peak1-14992-35-53--0.323517243700964-0.527635886371667	chr3	108145331	108146551	+	0	NA	intron (NM_019972, intron 11 of 19)	L1MA9|LINE|L1	-21888	NM_026831	68753	Mm.75201	NM_026831	ENSMUSG00000068745	Mybphl	1110037P11Rik	myosin binding protein H-like	protein-coding
unique_peak1-5966-9-4-0.867685311516858-1.36011389749466	chr6	94101208	94101681	+	0	NA	intron (NM_001286784, intron 1 of 22)	RLTR18B|LTR|ERVK	132467	NM_001286786	14924	Mm.217216	NM_010367	ENSMUSG00000045095	Magi1	AIP3|BAP1|Baiap1|Gukmi1|MAGI1c|Magi-1|TNRC19|WWP3|mKIAA4129	membrane associated guanylate kinase, WW and PDZ domain containing 1	protein-coding
common_peak2-27028-8-11--0.579740082773585-1.14218153353838	chr2	174415761	174416237	+	0	NA	Intergenic	MTC|LTR|MaLR	-53036	NM_001099328	100043757	Mm.48711	NM_001099328	ENSMUSG00000050600	Zfp831	ENSMUSG00000050600|OTTMUSG00000017459	zinc finger protein 831	protein-coding
unique_peak2-35468-3-6--1.22133801201688-1.08602067057793	chr17	43225125	43225517	+	0	NA	3' UTR (NM_178589, exon 6 of 6)	3' UTR (NM_178589, exon 6 of 6)	69919	NR_045155	545207	Mm.329050	NR_045153		E130008D07Rik	-	RIKEN cDNA E130008D07 gene	ncRNA
common_peak2-24270-28-59--0.853931475787056-1.91853818381596	chr16	94525762	94527479	+	0	NA	Intergenic	Lx8|LINE|L1	-17157	NM_139145	110948	Mm.30921	NM_139145	ENSMUSG00000040820	Hlcs	410I21.SP6|D16Jhu34	holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase)	protein-coding
unique_peak2-37429-4-8--1.19338551529556-1.21878474469819	chr4	150694214	150694619	+	0	NA	intron (NM_001081557, intron 5 of 23)	intron (NM_001081557, intron 5 of 23)	-262354	NM_009498	22319	Mm.273930	NM_009498	ENSMUSG00000028955	Vamp3	D130027G05Rik|VAMP-3|ceb	vesicle-associated membrane protein 3	protein-coding
unique_peak2-37956-5-11--1.28934283672701-1.477227296591	chr5	151316137	151316547	+	0	NA	intron (NM_001159693, intron 2 of 3)	intron (NM_001159693, intron 2 of 3)	4392	NM_001159693	545824	Mm.380068	NM_001159693	ENSMUSG00000056586	Zar1l	XM_359419	zygote arrest 1-like	protein-coding
common_peak2-21479-12-8-0.478850983645327-0.562038191119709	chr11	88164947	88165327	+	0	NA	intron (NM_054043, intron 11 of 13)	intron (NM_054043, intron 11 of 13)	-1138	NR_039545	100628571		NR_039545	miRBase:MI0016973	Mir378b	mmu-mir-378b	microRNA 378b	ncRNA
common_peak2-26757-21-20-0.177171842487475-0.380101753845079	chr2	138256561	138257323	+	0	NA	Intergenic	MLT1H2|LTR|MaLR	152713	NM_145534	228662	Mm.153405	NM_145534	ENSMUSG00000062098	Btbd3	mKIAA0952	BTB (POZ) domain containing 3	protein-coding
common_peak1-12463-19-17-0.232762325219374-0.392630012299441	chr17	84072134	84073044	+	0	NA	Intergenic	(CAAA)n|Simple_repeat|Simple_repeat	-32914	NM_001171054	116871	Mm.277668	NM_054082	ENSMUSG00000055817	Mta3	1110002J22Rik|mKIAA1266	metastasis associated 3	protein-coding
common_peak1-12594-18-21--0.146512467408946-0.306326795069975	chr18	24111502	24112261	+	0	NA	Intergenic	Intergenic	-1308	NM_027007	69256	Mm.218343	NM_027007	ENSMUSG00000024276	Zfp397	2810411K16Rik|6720480F11Rik|AI461664	zinc finger protein 397	protein-coding
unique_peak2-33936-5-6--0.511735258063458-0.947717972411649	chr12	73112113	73112531	+	0	NA	Intergenic	RLTR25B|LTR|ERVK	59656	NM_181752	238252	Mm.390508	NM_181752	ENSMUSG00000043398	Gpr135	PAFR	G protein-coupled receptor 135	protein-coding
common_peak2-31288-7-7--0.200909169701811-0.97990265578305	chr8	72491831	72492184	+	0	NA	intron (NM_145596, intron 1 of 12)	intron (NM_145596, intron 1 of 12)	6275	NM_001113346	234366	Mm.270044	NM_145596	ENSMUSG00000036180	Gatad2a	1110066C11Rik|BC031407|C80248	GATA zinc finger domain containing 2A	protein-coding
unique_peak1-6766-13-4-1.45654393575041-2.23384849113406	chr8	60890278	60890935	+	0	NA	intron (NM_175032, intron 4 of 11)	LTR73|LTR|ERV1	288987	NM_001177534	100271928	Mm.484123	NM_001177534		Gm15881	OTTMUSG00000027193	predicted gene 15881	protein-coding
unique_peak2-37895-1-7--2.62705701021674-1.80617997398389	chr5	140789530	140789902	+	0	NA	intron (NM_010752, intron 2 of 17)	intron (NM_010752, intron 2 of 17)	7790	NM_010752	17120	Mm.27250	NM_010752	ENSMUSG00000029554	Mad1l1	AI173502|AW550425|Mad1	MAD1 mitotic arrest deficient 1-like 1	protein-coding
unique_peak2-39789-3-6--1.22133801201688-1.08602067057793	chrX	12127984	12128342	+	0	NA	Intergenic	ORR1A4|LTR|MaLR	-36722	NM_027439	70495	Mm.25148	NM_027439	ENSMUSG00000031007	Atp6ap2	(P)RR|5730403E06Rik|APT6M8-9|ATP6M8-9|Atp6ip2|M8-9	ATPase, H+ transporting, lysosomal accessory protein 2	protein-coding
common_peak2-22008-14-21--0.560215458279653-0.519193887192484	chr12	56345167	56345879	+	0	NA	intron (NM_001100110, intron 4 of 15)	MER58A|DNA|MER1_type	14058	NM_001100110	100101806	Mm.471968	NM_001100110	ENSMUSG00000021020	Srp54c	E330029E12Rik	signal recognition particle 54C	protein-coding
common_peak2-28502-22-16-0.559821263837065-0.733541631673787	chr5	8732646	8733477	+	0	NA	intron (NM_011076, intron 22 of 27)	intron (NM_011076, intron 22 of 27)	-65086	NM_011075	18669	Mm.146649	NM_011075	ENSMUSG00000028970	Abcb1b	Abcb1|Mdr1|Mdr1b|Pgy-1|Pgy1|mdr	ATP-binding cassette, sub-family B (MDR/TAP), member 1B	protein-coding
common_peak2-21888-333-392-0.711536599618034-13.7460357513407	chr12	3109784	3110198	+	0	NA	Intergenic	GSAT_MM|Satellite|Satellite	-125800	NR_015551	74173	Mm.309774	NM_028796	ENSMUSG00000079179	Rab10os	1700012B15Rik|1810036A22Rik	RAB10, member RAS oncogene family, opposite strand	ncRNA
common_peak2-29798-6-4-0.24347001549294-0.989110657569874	chr6	91013515	91013869	+	0	NA	intron (NM_018815, intron 14 of 39)	B3|SINE|B2	53128	NM_018815	54563	Mm.28162	NM_018815	ENSMUSG00000030091	Nup210	9830001L10|AI836801|Pom210|gp190|gp210	nucleoporin 210	protein-coding
common_peak1-15130-15-26--0.742722751607812-0.823046386575433	chr3	139075451	139076023	+	0	NA	intron (NM_198659, intron 10 of 13)	intron (NM_198659, intron 10 of 13)	206880	NM_198659	381476	Mm.188334	NM_198659	ENSMUSG00000047940	Stpg2	B930007M17Rik|Gm1017	sperm tail PG rich repeat containing 2	protein-coding
common_peak1-17199-30-20-0.777357986713112-1.30767018140166	chr6	124925502	124926622	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-10515	NM_001164089	26894	Mm.244536	NM_012003	ENSMUSG00000030127	Cops7a	D6Ertd35e	COP9 (constitutive photomorphogenic) homolog, subunit 7a (Arabidopsis thaliana)	protein-coding
unique_peak2-32967-3-8--1.58390809140159-1.39487600375387	chr10	47453739	47454151	+	0	NA	Intergenic	MURVY-LTR|LTR|ERV1	1361704	NR_046212	100418235	Mm.185993	NR_046212		C130030K03Rik	-	proteasome (prosome, macropain) subunit, alpha type 6 pseudogene	pseudo
common_peak2-30637-17-12-0.517856620063946-0.647240723060192	chr7	98164368	98165020	+	0	NA	Intergenic	Lx5|LINE|L1	-74602	NM_011807	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
unique_peak2-38299-4-4--0.345388608740609-0.864171920961574	chr6	135406425	135406842	+	0	NA	Intergenic	L1Md_T|LINE|L1	89122	NM_001288627	13730	Mm.182785	NM_010128	ENSMUSG00000030208	Emp1	I-8-09|TMP	epithelial membrane protein 1	protein-coding
common_peak1-9188-29-54--0.669069632909549-1.18863360106103	chr11	79253850	79254952	+	0	NA	exon (NM_010897, exon 18 of 58)	exon (NM_010897, exon 18 of 58)	43132	NR_045305	104522	Mm.436987	NR_045305	ENSMUSG00000091523	AU040972	AU040954	expressed sequence AU040972	ncRNA
unique_peak2-32951-6-9--0.75652998450706-1.11707584880836	chr10	41476639	41477177	+	0	NA	intron (NM_001243074, intron 2 of 10)	intron (NM_001243074, intron 2 of 10)	52561	NM_001243075	103268	Mm.338605	NM_026643	ENSMUSG00000019813	Cep57l1	2410017P07Rik|4930484D11Rik|AI607327|cep57R	centrosomal protein 57-like 1	protein-coding
common_peak1-17205-29-36--0.0971632850138393-0.304088508634286	chr6	125191853	125192931	+	0	NA	Intergenic	ORR1A3|LTR|MaLR	-5347	NM_001286753	21940	Mm.367714	NM_001033126	ENSMUSG00000030336	Cd27	S152|Tnfrsf7|Tp55	CD27 antigen	protein-coding
common_peak2-22247-19-33--0.684775514588653-0.884951936461256	chr13	69533578	69534669	+	0	NA	Intergenic	RLTR9B2|LTR|ERVK	138619	NM_198600	210106	Mm.315959	NM_198600	ENSMUSG00000034575	Papd7	LAK-1|POLK|Pols|TRF4|TRF4-1	PAP associated domain containing 7	protein-coding
common_peak1-15234-12-10-0.189344366450341-0.386243247519795	chr4	6270574	6271348	+	0	NA	Intergenic	B4|SINE|B4	-21866	NM_016807	53378	Mm.247473	NM_016807	ENSMUSG00000028249	Sdcbp	MDA-9|Sycl|syntenin-1	syndecan binding protein	protein-coding
unique_peak1-6068-8-4-0.683294323060208-1.21878474469819	chr6	118149994	118150458	+	0	NA	Intergenic	Intergenic	-2464	NM_001080780	19713	Mm.57199	NM_009050	ENSMUSG00000030110	Ret	PTC|RET51|RET9|c-Ret	ret proto-oncogene	protein-coding
unique_peak2-39585-4-9--1.34538860874061-1.36011389749466	chr9	75780793	75781272	+	0	NA	Intergenic	L1_Mur2|LINE|L1	-81752	NM_173731	208982	Mm.82306	NM_173731	ENSMUSG00000007908	Hmgcll1	BC037381	3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1	protein-coding
common_peak1-13158-6-4-0.24347001549294-0.989110657569874	chr19	10566247	10566703	+	0	NA	Intergenic	Intergenic	-9088	NM_133689	67752	Mm.25939	NM_133689	ENSMUSG00000035179	Ppp1r32	4930579J09Rik|AU015816|IIIG9|IIIG9L|IIIG9S	protein phosphatase 1, regulatory subunit 32	protein-coding
common_peak1-7805-32-38--0.00631019964258872-0.303850168981672	chr1	118458736	118459764	+	0	NA	intron (NM_001077425, intron 21 of 23)	intron (NM_001077425, intron 21 of 23)	877536	NM_001077425	636808	Mm.101576	NM_001077425	ENSMUSG00000070695	Cntnap5a	Caspr5-1|EG636808	contactin associated protein-like 5A	protein-coding
common_peak1-11136-11-17--0.661231417190699-0.58239619684445	chr15	72652094	72652566	+	0	NA	intron (NM_001164641, intron 17 of 17)	L1_Mur2|LINE|L1	-11576	NR_002864	353342	Mm.440245	NR_002864		Peg13	-	paternally expressed 13	ncRNA
common_peak2-32421-7-9--0.522837264589173-1.05908390183068	chrX	164012433	164012938	+	0	NA	intron (NM_001290427, intron 5 of 17)	L1MA4A|LINE|L1	-192054	NM_026662	110639	Mm.272955	NM_026662	ENSMUSG00000025742	Prps2	2610101M19Rik|AA589463|AI464149|Prps-2	phosphoribosyl pyrophosphate synthetase 2	protein-coding
unique_peak2-35091-4-6--0.830815435910851-0.989110657569874	chr16	18392597	18392975	+	0	NA	exon (NM_001272031, exon 1 of 17)	exon (NM_001272031, exon 1 of 17)	130	NM_001272032	11877	Mm.293599	NM_033474	ENSMUSG00000000325	Arvcf	-	armadillo repeat gene deleted in velo-cardio-facial syndrome	protein-coding
common_peak2-22446-6-10--0.894033508256995-1.21398586181642	chr13	41249817	41250233	+	0	NA	Intergenic	Intergenic	-44668	NM_008104	107889	Mm.1399	NM_008104	ENSMUSG00000021362	Gcm2	Gcm-rs1|Gcm1|Gcm1-rs2	glial cells missing homolog 2 (Drosophila)	protein-coding
unique_peak2-39769-6-8--0.60452689106201-1.03789460276074	chrX	7422542	7422992	+	0	NA	intron (NM_001290536, intron 1 of 8)	intron (NM_001290536, intron 1 of 8)	3559	NM_001290537	54644	Mm.142827	NM_138604	ENSMUSG00000031154	Otud5	AA407879|AI553596|BB114028|DUBA|DXImx46e|Sfc7	OTU domain containing 5	protein-coding
unique_peak2-35186-1-7--2.62705701021674-1.80617997398389	chr16	55975191	55975615	+	0	NA	promoter-TSS (NR_027965)	promoter-TSS (NR_027965)	-673	NR_027965	66391	Mm.472722	NM_133677		2310061J03Rik	-	RIKEN cDNA 2310061J03 gene	ncRNA
common_peak2-31044-51-39-0.75299573071521-1.92631927296918	chr8	14888225	14889046	+	0	NA	promoter-TSS (NM_012000)	promoter-TSS (NM_012000)	99	NM_012000	26889	Mm.254027	NM_012000	ENSMUSG00000026317	Cln8	mnd	ceroid-lipofuscinosis, neuronal 8	protein-coding
unique_peak2-38862-3-8--1.58390809140159-1.39487600375387	chr7	145056648	145056942	+	0	NA	Intergenic	Intergenic	427438	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
common_peak2-25829-26-10-1.46846747352116-2.57346781069461	chr19	38819210	38819802	+	0	NA	intron (NM_019588, intron 18 of 31)	intron (NM_019588, intron 18 of 31)	74221	NM_021315	57753	Mm.86482	NM_021315	ENSMUSG00000024999	Noc3l	AF233884|Fad24	nucleolar complex associated 3 homolog (S. cerevisiae)	protein-coding
common_peak2-29481-8-11--0.579740082773585-1.14218153353838	chr6	31086797	31087211	+	0	NA	intron (NR_110471, intron 3 of 3)	intron (NR_110471, intron 3 of 3)	-73911	NR_029532	387223		NR_029532	miRBase:MI0000143	Mir29b-1	Mirn29b|Mirn29b-1	microRNA 29b-1	ncRNA
common_peak1-10531-86-149--0.253182896463527-0.719230678178271	chr14	14012147	14013614	+	0	NA	intron (NR_121588, intron 2 of 3)	intron (NR_121588, intron 2 of 3)	104272	NR_121589	328354	Mm.252404	NM_177813	ENSMUSG00000051729	Gm5087	C630025C03|EG328354	predicted gene 5087	ncRNA
unique_peak1-5645-9-4-0.867685311516858-1.36011389749466	chr6	28479222	28479763	+	0	NA	intron (NM_019776, intron 8 of 23)	intron (NM_019776, intron 8 of 23)	49144	NM_019776	56463	Mm.439987	NM_019776	ENSMUSG00000001424	Snd1	AL033314|Tudor-SN	staphylococcal nuclease and tudor domain containing 1	protein-coding
common_peak2-22387-15-10-0.552733131918359-0.604422558181019	chr13	31625636	31626200	+	0	NA	Intergenic	Intergenic	-24121	NM_008239	15220	Mm.44235	NM_008239	ENSMUSG00000038415	Foxq1	HFH-1|Hfh1|Hfh1l|sa	forkhead box Q1	protein-coding
common_peak2-25210-103-107-0.533110243696572-2.29505855809809	chr18	60774328	60775492	+	0	NA	intron (NM_177340, intron 1 of 2)	intron (NM_177340, intron 1 of 2)	-5152	NM_001109975	104027	Mm.252321	NM_177340	ENSMUSG00000043079	Synpo	9030217H17Rik|9130229N11|9330140I15Rik|AW046661	synaptopodin	protein-coding
common_peak2-32300-23-28--0.136213490618491-0.317118655902079	chrX	41911059	41911926	+	0	NA	Intergenic	Lx3C|LINE|L1	-189978	NM_175539	245403	Mm.55270	NM_175539	ENSMUSG00000050926	Dcaf12l2	A130007F10Rik|Wdr40c	DDB1 and CUL4 associated factor 12-like 2	protein-coding
unique_peak2-36703-3-6--1.22133801201688-1.08602067057793	chr3	41587582	41587917	+	0	NA	Intergenic	ETnERV2-int|LTR|ERVK	41209	NM_027271	73852	Mm.29006	NM_027271	ENSMUSG00000025766	D3Ertd751e	2810009O15Rik|4930415G15Rik	DNA segment, Chr 3, ERATO Doi 751, expressed	protein-coding
unique_peak2-33154-2-7--1.91745425626332-1.45399745587252	chr10	88781590	88782053	+	0	NA	Intergenic	Intergenic	-61286	NR_102339	320091	Mm.236464	NM_178773	ENSMUSG00000035189	Ano4	A330096O15Rik|Gm65|Tmem16d	anoctamin 4	protein-coding
common_peak1-19322-10-10--0.103016273628528-0.301029995663987	chr9	123529865	123530343	+	0	NA	intron (NM_011731, intron 1 of 10)	RLTR22_Mur|LTR|ERVK	11579	NM_011731	22599	Mm.41963	NM_011731	ENSMUSG00000025243	Slc6a20b	AA986306|Sit1|Slc6a20|XT3|Xtrp3	solute carrier family 6 (neurotransmitter transporter), member 20B	protein-coding
unique_peak1-6163-8-2-1.42025991722641-1.65811743852845	chr6	140545942	140546470	+	0	NA	Intergenic	Intergenic	-24978	NM_178803	11569	Mm.86453	NM_009637	ENSMUSG00000030232	Aebp2	AU023766|B230313N05Rik	AE binding protein 2	protein-coding
common_peak2-25077-70-78-0.316186168198295-0.795614124956299	chr18	35562208	35563297	+	0	NA	intron (NM_030749, intron 3 of 9)	intron (NM_030749, intron 3 of 9)	95827	NM_030749	81500	Mm.291482	NM_030749	ENSMUSG00000024357	Sil1	1810057E01Rik|AI042831|wz	endoplasmic reticulum chaperone SIL1 homolog (S. cerevisiae)	protein-coding
unique_peak1-2558-9-0-3.18961340640422-3.01029995663981	chr16	24238145	24238562	+	0	NA	Intergenic	Intergenic	-155083	NM_178665	210126	Mm.209385	NM_178665	ENSMUSG00000033306	Lpp	9430020K16Rik|AA959454|AU024130|B130055L10Rik|C79715|D630048H16	LIM domain containing preferred translocation partner in lipoma	protein-coding
common_peak1-11246-32-23-0.694129518498504-1.20786488037717	chr15	80012255	80013482	+	0	NA	intron (NM_010795, intron 1 of 1)	intron (NM_010795, intron 1 of 1)	8717	NM_010795	17309	Mm.299693	NM_010795	ENSMUSG00000042428	Mgat3	1110038J12Rik|AI848272|GnT-III	mannoside acetylglucosaminyltransferase 3	protein-coding
common_peak2-26511-36-50--0.193104255803741-0.358200417993044	chr2	90579518	90581145	+	0	NA	Intergenic	Intergenic	-5196	NM_018828	55935	Mm.489638	NM_018828	ENSMUSG00000008200	Fnbp4	FBP30|Fnbp30|mKIAA1014	formin binding protein 4	protein-coding
unique_peak2-33865-9-9--0.132314688483142-1.03275496310833	chr12	21144947	21145445	+	0	NA	intron (NM_001098168, intron 1 of 27)	intron (NM_001098168, intron 1 of 27)	27579	NM_001135192	211914	Mm.358946	NM_001004364	ENSMUSG00000052632	Asap2	6530401G17Rik|Ddef2|Gm1523|Gm592|PAG3|PAP	ArfGAP with SH3 domain, ankyrin repeat and PH domain 2	protein-coding
common_peak2-23497-16-37--1.12966387117552-1.94848218498813	chr15	76195097	76196795	+	0	NA	Intergenic	Intergenic	-3382	NM_021555	59053	Mm.133202	NM_021555	ENSMUSG00000022554	Hgh1	Brp16|D15Ertd741e|Fam203a	HGH1 homolog	protein-coding
unique_peak1-1688-8-2-1.42025991722641-1.65811743852845	chr13	75226598	75227021	+	0	NA	promoter-TSS (NM_013628)	promoter-TSS (NM_013628)	-626	NM_013628	18548	Mm.1333	NM_013628	ENSMUSG00000021587	Pcsk1	Nec-1|Nec1|PC1|PC3|Phpp-1|SPC3	proprotein convertase subtilisin/kexin type 1	protein-coding
unique_peak2-38039-7-10--0.660340788339108-1.12966497611638	chr6	38754314	38754932	+	0	NA	intron (NM_001294144, intron 2 of 14)	B1_Mus2|SINE|Alu	32687	NM_001136065	15258	Mm.23790	NM_010433	ENSMUSG00000061436	Hipk2	1110014O20Rik|B230339E18Rik|Stank	homeodomain interacting protein kinase 2	protein-coding
unique_peak1-6256-12-1-2.64877598508764-3.36932189928148	chr7	19695072	19695581	+	0	NA	Intergenic	MLT1D|LTR|MaLR	-9882	NM_175530	243867	Mm.230830	NM_175530	ENSMUSG00000050428	Fbxo46	20D7-FC4|4932704E22Rik|Fbxo34l	F-box protein 46	protein-coding
unique_peak1-6526-11-7-0.508693584251613-1.21681515183528	chr7	121043845	121044561	+	0	NA	intron (NM_145584, intron 5 of 15)	intron (NM_145584, intron 5 of 15)	134691	NM_145584	233744	Mm.334160	NM_145584	ENSMUSG00000038156	Spon1	AI666765|AW455831|BC020531|D330035F22Rik|FSP	spondin 1, (f-spondin) extracellular matrix protein	protein-coding
common_peak2-21357-19-34--0.72659569028328-0.974620203848502	chr11	78079897	78080831	+	0	NA	intron (NM_001002004, intron 9 of 38)	intron (NM_001002004, intron 9 of 38)	5108	NM_001002004	72503	Mm.237103	NM_001002004	ENSMUSG00000010277	2610507B11Rik	AU022687|D11Bhm178e|D11Bhm179e|E1|Kiaa0100|mKIAA0100	RIKEN cDNA 2610507B11 gene	protein-coding
unique_peak2-36118-3-7--1.41398308995928-1.23214870625617	chr2	5095546	5095961	+	0	NA	intron (NM_028804, intron 2 of 2)	intron (NM_028804, intron 2 of 2)	36931	NM_028804	74186	Mm.274715	NM_028804	ENSMUSG00000026676	Ccdc3	2310045O21Rik	coiled-coil domain containing 3	protein-coding
unique_peak2-35469-6-14--1.34149248522822-1.01572999746118	chr17	43407736	43408512	+	0	NA	intron (NM_133776, intron 1 of 15)	intron (NM_133776, intron 1 of 15)	828	NM_133776	77596	Mm.159950	NM_133776	ENSMUSG00000041293	Gpr110	5031409J19Rik|KPG_009	G protein-coupled receptor 110	protein-coding
common_peak1-9819-64-102--0.221054125474615-0.525237659713319	chr12	70824591	70826429	+	0	NA	promoter-TSS (NM_026536)	promoter-TSS (NM_026536)	351	NM_145443	217666	Mm.103362	NM_145443	ENSMUSG00000020988	L2hgdh	BC016226	L-2-hydroxyglutarate dehydrogenase	protein-coding
common_peak2-31435-67-82-0.169372051436071-0.451270827739867	chr8	95806431	95808137	+	0	NA	Intergenic	Intergenic	-3649	NM_144930	234564	Mm.29110	NM_144930	ENSMUSG00000031725	Ces1f	AU018778|CesML1|TGH-2	carboxylesterase 1F	protein-coding
common_peak2-23603-71-66-0.578354988262199-1.82396640699901	chr15	81399112	81400505	+	0	NA	Intergenic	B3|SINE|B2	-16836	NM_177821	328572	Mm.258397	NM_177821	ENSMUSG00000055024	Ep300	A430090G16|A730011L11|KAT3B|p300|p300 HAT	E1A binding protein p300	protein-coding
common_peak1-15003-10-24--1.28744084476596-1.59083646988122	chr3	108840020	108840542	+	0	NA	Intergenic	Intergenic	-9756	NM_001163567	329739	Mm.69013	NM_001163567	ENSMUSG00000040339	Fam102b	1600010D10Rik|B430201A12Rik	family with sequence similarity 102, member B	protein-coding
unique_peak2-38958-2-11--2.50241675698448-2.32232533660526	chr8	31829498	31830040	+	0	NA	Intergenic	Intergenic	150902	NR_045856	71314	Mm.158666	NR_045856	ENSMUSG00000097044	4933433F19Rik	-	RIKEN cDNA 4933433F19 gene	ncRNA
common_peak1-8102-45-59--0.046532570263647-0.302885977585733	chr1	181623159	181624286	+	0	NA	Intergenic	MT2_Mm|LTR|ERVL	25360	NM_178653	109232	Mm.136458	NM_178653	ENSMUSG00000038936	Sccpdh	AW214504|C330023F11Rik	saccharopine dehydrogenase (putative)	protein-coding
unique_peak1-176-23-9-1.39983940962172-2.17218792383888	chr1	74298300	74299354	+	0	NA	intron (NM_029711, intron 4 of 9)	B3|SINE|B2	15703	NM_029711	76709	Mm.337038	NM_029711	ENSMUSG00000006304	Arpc2	2210023N03Rik|34kDa|p34-Arc	actin related protein 2/3 complex, subunit 2	protein-coding
unique_peak1-6012-8-4-0.683294323060208-1.21878474469819	chr6	108542230	108542669	+	0	NA	intron (NR_104577, intron 3 of 6)	intron (NR_104577, intron 3 of 6)	30712	NR_040757	75394	Mm.395061	NR_040757	ENSMUSG00000087341	0610040F04Rik	-	RIKEN cDNA 0610040F04 gene	ncRNA
common_peak2-24297-10-19--0.965512749878593-0.917676348953458	chr17	24936253	24937051	+	0	NA	Intergenic	RLTR28B|LTR|ERVL	-4675	NM_029197	75178	Mm.52592	NM_029197	ENSMUSG00000024155	Meiob	4930528F23Rik|MLZ-675	meiosis specific with OB domains	protein-coding
common_peak2-31056-57-86--0.176910455769799-0.408992416275689	chr8	19979940	19980919	+	0	NA	TTS (NR_028428)	TTS (NR_028428)	-21649	NM_001177408	100040599	Mm.491087	NM_001177408	ENSMUSG00000074449	Gm15319	OTTMUSG00000020118	predicted gene 15319	protein-coding
unique_peak1-2600-9-2-1.60465090568306-1.87199725847353	chr16	32746698	32747064	+	0	NA	intron (NM_080457, intron 1 of 26)	Tigger7|DNA|MER2_type	10909	NM_080457	140474	Mm.214599	NM_080457	ENSMUSG00000079620	Muc4	4933405I11Rik|Asgp	mucin 4	protein-coding
common_peak1-13685-23-10-1.26233588587178-1.90052685918624	chr2	29819967	29821006	+	0	NA	promoter-TSS (NM_001177667)	promoter-TSS (NM_001177667)	-594	NM_001177668	20740	Mm.204969	NM_001076554	ENSMUSG00000057738	Sptan1	2610027H02Rik|Spna-2|Spna2	spectrin alpha, non-erythrocytic 1	protein-coding
unique_peak1-4170-24-3-2.79320990276772-5.35253599412607	chr2	109839463	109840278	+	0	NA	intron (NM_172671, intron 7 of 17)	intron (NM_172671, intron 7 of 17)	-18104	NM_026613	68201	Mm.181767	NM_026613	ENSMUSG00000027160	Ccdc34	2810027O19Rik|4930522P10Rik|AI596202	coiled-coil domain containing 34	protein-coding
unique_peak2-39864-6-9--0.75652998450706-1.11707584880836	chrX	73476748	73477287	+	0	NA	Intergenic	ID_B1|SINE|B4	-32628	NM_001013760	238829	Mm.292319	NM_001013760	ENSMUSG00000071738	Gm4937	EG238829	predicted gene 4937	protein-coding
unique_peak1-6421-10-0-3.35641534500877-3.31132995230379	chr7	89175129	89175739	+	0	NA	Intergenic	Intergenic	-38249	NM_007562	12173	Mm.243802	NM_007562	ENSMUSG00000025105	Bnc1	AI047752|AW546376|Bnc	basonuclin 1	protein-coding
common_peak1-13117-11-6-0.701338662194009-1.32595962126035	chr19	8926860	8927585	+	0	NA	3' UTR (NM_001013019, exon 2 of 2)	3' UTR (NM_001013019, exon 2 of 2)	1947	NM_001013019	68852	Mm.265792	NM_001013019	ENSMUSG00000071656	Lrrn4cl	1110067I12Rik	LRRN4 C-terminal like	protein-coding
unique_peak1-6817-11-3-1.50869358425161-1.95434855131066	chr8	73313301	73313856	+	0	NA	intron (NM_199308, intron 3 of 25)	intron (NM_199308, intron 3 of 25)	2754	NM_199308	546071	Mm.250731	NM_199308	ENSMUSG00000031833	Mast3	BC024265|mKIAA0561	microtubule associated serine/threonine kinase 3	protein-coding
common_peak2-22920-17-26--0.53659116395843-0.538442145997695	chr14	46143740	46144959	+	0	NA	intron (NM_146054, intron 2 of 14)	intron (NM_146054, intron 2 of 14)	5391	NM_146054	218952	Mm.210018	NM_146054	ENSMUSG00000037712	Fermt2	AA960555|Kindlin-2|Mig2|Plekhc1	fermitin family homolog 2 (Drosophila)	protein-coding
common_peak1-19104-11-2-1.92373108353046-2.32232533660526	chr9	73805924	73806492	+	0	NA	Intergenic	Intergenic	-24834	NM_001081153	208898	Mm.41035	NM_001081153	ENSMUSG00000062151	Unc13c	1500037O19Rik|AU019458|D9Ertd414e|Munc13-3|Unc13h3	unc-13 homolog C (C. elegans)	protein-coding
common_peak2-28775-10-8-0.186490343566457-1.078512453669	chr5	52910204	52910723	+	0	NA	Intergenic	MT2A|LTR|ERVL	47056	NM_144945	246316	Mm.44721	NM_144945	ENSMUSG00000039252	Lgi2	mKIAA1916	leucine-rich repeat LGI family, member 2	protein-coding
unique_peak2-37463-4-13--1.83081543591085-2.04196296489515	chr5	107986453	107987059	+	0	NA	intron (NM_001161739, intron 13 of 16)	intron (NM_001161739, intron 13 of 16)	23026	NM_175241	76421	Mm.67037	NM_175241	ENSMUSG00000089798	1700028K03Rik	-	RIKEN cDNA 1700028K03 gene	protein-coding
common_peak1-13380-74-78-0.412105828801504-1.16922519370489	chr19	46500642	46502988	+	0	NA	intron (NM_001025391, intron 3 of 11)	RMER17B|LTR|ERVK	30429	NM_015752	24069	Mm.41210	NM_015752	ENSMUSG00000025231	Sufu	Su(fu)	suppressor of fused homolog (Drosophila)	protein-coding
common_peak1-15742-7-8--0.370834171144123-1.00793137938329	chr4	148820563	148820967	+	0	NA	Intergenic	MTE2b|LTR|MaLR	8312	NM_022020	63954	Mm.46023	NM_022020	ENSMUSG00000028996	Rbp7	1110002J23Rik|CRBP-III	retinol binding protein 7, cellular	protein-coding
unique_peak1-5207-11-2-1.92373108353046-2.32232533660526	chr5	35723703	35724343	+	0	NA	Intergenic	MLT1A1|LTR|MaLR	-7743	NM_010445	15371	Mm.358606	NM_010445	ENSMUSG00000067438	Hmx1	Nkx5-3	H6 homeobox 1	protein-coding
unique_peak1-269-9-1-2.18961340640422-2.31132995230379	chr1	93653772	93654473	+	0	NA	Intergenic	Intergenic	-43932	NM_007855	13345	Mm.9474	NM_007855	ENSMUSG00000007805	Twist2	Dermo1|bHLHa39	twist basic helix-loop-helix transcription factor 2	protein-coding
unique_peak2-36462-2-10--2.37688587490062-2.09384600808989	chr2	143081806	143082284	+	0	NA	Intergenic	Intergenic	177817	NM_020595	57329	Mm.157751	NM_020595	ENSMUSG00000027416	Otor	CDRAP|Fdp|MIA|MIAL	otoraplin	protein-coding
unique_peak2-35746-5-6--0.511735258063458-0.947717972411649	chr18	37742050	37742476	+	0	NA	intron (NM_001301259, intron 1 of 3)	intron (NM_001301259, intron 1 of 3)	56114	NM_001159275	83885	Mm.193029	NM_001159275	ENSMUSG00000050304	Slc25a2	Ornt2	solute carrier family 25 (mitochondrial carrier, ornithine transporter) member 2	protein-coding
common_peak1-15740-37-42-0.0997283167837208-0.340524918943711	chr4	148558121	148559231	+	0	NA	intron (NM_207682, intron 42 of 46)	B4A|SINE|B4	-17860	NM_001081274	110208	Mm.252080	NM_025801	ENSMUSG00000028961	Pgd	0610042A05Rik|AU019875|C78335	phosphogluconate dehydrogenase	protein-coding
unique_peak1-1905-6-2-0.980435609659146-1.26211192963361	chr14	69288673	69289186	+	0	NA	Intergenic	Intergenic	-15030	NM_183366	13522	Mm.117450	NM_010082	ENSMUSG00000014725	Adam28	C130072N01Rik|D430033C21Rik|Dtgn1|MDC-L|MDC-Lm|MDC-Ls|MDCL|TECADAM|eMDCII	a disintegrin and metallopeptidase domain 28	protein-coding
unique_peak1-3543-17-1-3.21829633820504-4.59734841376773	chr19	23800676	23801641	+	0	NA	Intergenic	Intergenic	-32208	NM_177034	319924	Mm.22879	NM_177034	ENSMUSG00000024897	Apba1	6430513E09Rik|Lin-10|Mint|Mint1|Urop11|X11|X11alpha	amyloid beta (A4) precursor protein binding, family A, member 1	protein-coding
unique_peak2-39154-7-14--1.10779976531033-0.817533494790411	chr8	88339912	88340515	+	0	NA	intron (NM_028007, intron 5 of 17)	intron (NM_028007, intron 5 of 17)	24635	NM_028007	71927	Mm.61018	NM_028007	ENSMUSG00000031703	Itfg1	2310047C21Rik|AI314457|Cda08|D8Wsu49e	integrin alpha FG-GAP repeat containing 1	protein-coding
unique_peak1-5693-16-0-4.11826364226806-5.41853992195166	chr6	34449963	34450693	+	0	NA	intron (NM_007563, intron 2 of 2)	B3A|SINE|B2	23972	NM_007563	12183	Mm.282863	NM_007563	ENSMUSG00000038871	Bpgm	AI323730|AL022789|C86192	2,3-bisphosphoglycerate mutase	protein-coding
unique_peak1-1316-12-4-1.32684789020028-2.04196296489515	chr12	55443306	55443896	+	0	NA	Intergenic	Intergenic	48704	NR_033689	665239	Mm.26856	NR_033689		Gm7550	EG665239|Gm666	predicted gene 7550	ncRNA
common_peak1-15925-23-37--0.526160008934505-0.720235944639228	chr5	24684799	24685637	+	0	NA	Intergenic	B4A|SINE|B4	-2080	NM_026449	67909	Mm.141471	NM_026449	ENSMUSG00000028938	Galntl5	1700021B12Rik|Galnt15	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 5	protein-coding
common_peak1-14234-15-46--1.54242410112198-3.58938495778629	chr2	152830787	152831576	+	0	NA	intron (NM_001083618, intron 14 of 14)	intron (NM_001083618, intron 14 of 14)	9938	NM_178939	68559	Mm.12746	NM_178939	ENSMUSG00000027472	Pdrg1	1110004D19Rik|AU020945|AV006589|Pdrg	p53 and DNA damage regulated 1	protein-coding
common_peak2-28948-22-51--1.05315561305369-2.27205585058211	chr5	100038460	100039822	+	0	NA	intron (NR_030692, intron 1 of 3)	intron (NR_030692, intron 1 of 3)	118938	NR_030692	319818	Mm.295233	NR_030692	ENSMUSG00000089809	A930011G23Rik	-	RIKEN cDNA A930011G23 gene	ncRNA
unique_peak2-36037-5-7--0.704380336005853-1.01466476204226	chr19	43886903	43887249	+	0	NA	intron (NM_013806, intron 14 of 31)	MamRep1879|DNA|hAT?	-26217	NR_033472	100038628	Mm.212585	NR_033472	ENSMUSG00000074828	Gm10768	ENSMUSG00000074828	predicted gene 10768	ncRNA
common_peak2-29452-22-21-0.187852486450107-0.376654945067947	chr6	22355412	22356350	+	0	NA	Intergenic	(TA)n|Simple_repeat|Simple_repeat	-49800	NM_138587	27999	Mm.490307	NM_138587	ENSMUSG00000029672	Fam3c	D6Wsu176e|Ilei	family with sequence similarity 3, member C	protein-coding
common_peak1-8658-66-100--0.139727818325953-0.373433367857928	chr10	128034628	128036545	+	0	NA	Intergenic	ORR1D2|LTR|MaLR	-9029	NM_010153	13867	Mm.373043	NM_010153		Erbb3	C76256|Erbb-3|Erbb3r|Her3	v-erb-b2 erythroblastic leukemia viral oncogene homolog 3 (avian)	protein-coding
common_peak1-10456-15-13-0.204809828498052-0.368541233333383	chr13	108297143	108297847	+	0	NA	Intergenic	Intergenic	37593	NR_045084	105120	Mm.417700	NR_045083		AI197445	-	expressed sequence AI197445	ncRNA
common_peak2-29345-20-17-0.318149783148881-0.440610794044987	chr5	149015084	149015852	+	0	NA	intron (NM_029920, intron 4 of 14)	intron (NM_029920, intron 4 of 14)	196012	NM_007513	11987	Mm.275489	NM_007513	ENSMUSG00000041313	Slc7a1	4831426K01Rik|AI447493|Atrc-1|Atrc1|Cat1|Rec-1|Rev-1|mCAT-1	solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	protein-coding
common_peak1-12950-190-163-0.994298358804974-12.4533432948019	chr19	43613769	43617542	+	0	NA	Intergenic	Intergenic	-16560	NM_010324	14718	Mm.19039	NM_010324	ENSMUSG00000025190	Got1	AI789014|Got-1|cAspAT|cCAT	glutamate oxaloacetate transaminase 1, soluble	protein-coding
common_peak1-12970-15-14-0.105274154947137-0.330004445983672	chr19	3913337	3914137	+	0	NA	promoter-TSS (NM_001271444)	promoter-TSS (NM_001271444)	-963	NM_001271444	225887	Mm.44227	NM_144870	ENSMUSG00000059734	Ndufs8	BC021616|CI-23kD|TYKY	NADH dehydrogenase (ubiquinone) Fe-S protein 8	protein-coding
unique_peak2-37455-9-36--2.01983995922473-4.06788929322893	chr5	5684874	5685881	+	0	NA	intron (NM_028734, intron 1 of 5)	L1_Mus3|LINE|L1	8712	NM_001285471	74051	Mm.274956	NM_028734	ENSMUSG00000015653	Steap2	4921538B17Rik|AI930049|AW045895|IPCA-1|IPCA1|PCANAP1|STAMP1|STMP	six transmembrane epithelial antigen of prostate 2	protein-coding
unique_peak1-780-10-3-1.35641534500877-1.75805390616669	chr11	113245979	113246500	+	0	NA	intron (NM_027216, intron 5 of 9)	MER58A|DNA|MER1_type	-175256	NR_040276	319871	Mm.383743	NR_040276	ENSMUSG00000085421	4732490B19Rik	-	RIKEN cDNA 4732490B19 gene	ncRNA
common_peak1-18461-139-264--0.241632181934363-1.01378754285173	chr8	84200550	84204368	+	0	NA	intron (NM_001297596, intron 2 of 24)	intron (NM_001297596, intron 2 of 24)	335998	NM_001297593	234515	Mm.324468	NM_001024617	ENSMUSG00000037940	Inpp4b	E130107I17Rik	inositol polyphosphate-4-phosphatase, type II	protein-coding
common_peak2-31922-79-122--0.11367933816262-0.359928666095459	chr9	62342130	62344727	+	0	NA	intron (NM_175484, intron 1 of 11)	intron (NM_175484, intron 1 of 11)	41423	NM_175484	235431	Mm.335229	NM_175484	ENSMUSG00000041729	Coro2b	CLIPINC|E130012P22Rik	coronin, actin binding protein, 2B	protein-coding
common_peak1-12094-16-24--0.525592547506663-0.561823156887258	chr17	25166155	25166880	+	0	NA	intron (NM_134126, intron 6 of 29)	intron (NM_134126, intron 6 of 29)	13486	NM_134126	106633	Mm.32802	NM_134126	ENSMUSG00000024169	Ift140	AI661311|Tce5|Wdtc2|mKIAA0590	intraflagellar transport 140	protein-coding
common_peak1-9850-12-9-0.326847890200276-0.459837087125828	chr12	79614666	79615231	+	0	NA	intron (NM_145965, intron 9 of 22)	intron (NM_145965, intron 9 of 22)	-177574	NM_027597	70897	Mm.56514	NM_027597	ENSMUSG00000056987	Fam71d	4921509E07Rik|4930516C23Rik|GARI-L2	family with sequence similarity 71, member D	protein-coding
unique_peak2-36689-0-20--5.23244835325297-4.8766546284749	chr3	34655542	34656280	+	0	NA	Intergenic	Intergenic	-15086	NR_110488	102638436	Mm.261793	NR_110488		Peril	-	Peril transcript	ncRNA
common_peak1-14930-8-13--0.802132504110034-0.562038191119711	chr3	101380054	101380579	+	0	NA	3' UTR (NM_144900, exon 23 of 23)	3' UTR (NM_144900, exon 23 of 23)	28314	NM_144900	11928	Mm.280103	NM_144900	ENSMUSG00000033161	Atp1a1	Atpa-1|BC010319	ATPase, Na+/K+ transporting, alpha 1 polypeptide	protein-coding
unique_peak1-1841-9-1-2.18961340640422-2.31132995230379	chr14	45713184	45713705	+	0	NA	Intergenic	Intergenic	105658	NM_008964	19217	Mm.4630	NM_008964	ENSMUSG00000037759	Ptger2	EP2|Ptgerep2	prostaglandin E receptor 2 (subtype EP2)	protein-coding
common_peak1-10777-25-22-0.338287949288093-0.51032171069054	chr14	73384344	73385403	+	0	NA	Intergenic	Intergenic	-40537	NR_027860	668489	Mm.158324	NR_027860		Gm9199	EG668489	glycine cleavage system protein H (aminomethyl carrier) pseudogene	pseudo
common_peak2-28188-37-46--0.0285957801918189-0.301029995663982	chr4	116052790	116054174	+	0	NA	intron (NM_008641, intron 4 of 28)	Lx2B|LINE|L1	83304	NM_001042743	17776	Mm.9287	NM_008641	ENSMUSG00000003810	Mast2	MAST205|Mtssk	microtubule associated serine/threonine kinase 2	protein-coding
unique_peak1-4108-10-1-2.35641534500877-2.57096726280955	chr2	78399140	78399623	+	0	NA	Intergenic	RLTR28|LTR|ERVL	-309823	NM_009454	22193	Mm.1485	NM_009454		Ube2e3	Ubce4|ubcM2	ubiquitin-conjugating enzyme E2E 3	protein-coding
unique_peak1-7192-9-3-1.18961340640422-1.57096726280955	chr9	63748850	63749361	+	0	NA	Intergenic	MTC|LTR|MaLR	120761	NM_008542	17130	Mm.325757	NM_008542	ENSMUSG00000036867	Smad6	Madh6|b2b390Clo	SMAD family member 6	protein-coding
common_peak2-31382-16-17--0.0516613591742505-0.301029995663984	chr8	85700394	85701210	+	0	NA	intron (NM_027758, intron 1 of 17)	GA-rich|Low_complexity|Low_complexity	11551	NM_027758	71310	Mm.24031	NM_027758	ENSMUSG00000031709	Tbc1d9	4933431N12Rik|AI847101|AW490653|C76116	TBC1 domain family, member 9	protein-coding
common_peak2-31913-19-11-0.81772482594053-0.991115276827166	chr9	59695321	59695890	+	0	NA	intron (NM_173018, intron 16 of 43)	L2a|LINE|L2	96624	NM_173018	270163	Mm.249545	NM_173018	ENSMUSG00000039585	Myo9a	4732465J09Rik|C130068I12Rik|C230003M11	myosin IXa	protein-coding
unique_peak2-36212-1-6--2.43441193227435-1.56314192529759	chr2	33833267	33833710	+	0	NA	Intergenic	Intergenic	-90022	NM_175184	72543	Mm.254914	NM_175184	ENSMUSG00000038740	Mvb12b	2610200O14Rik|2610528K11Rik|AI414895|Fam125b	multivesicular body subunit 12B	protein-coding
common_peak1-17828-11-23--1.07626891646954-1.24082643394777	chr7	108934434	108935223	+	0	NA	exon (NM_009191, exon 14 of 16)	exon (NM_009191, exon 14 of 16)	-31999	NM_008887	11859	Mm.5028	NM_008887	ENSMUSG00000007946	Phox2a	Arix|Phox2|Pmx2|Pmx2a	paired-like homeobox 2a	protein-coding
unique_peak1-1446-20-3-2.48807478459119-3.8429424127101	chr12	101767480	101768430	+	0	NA	Intergenic	Intergenic	-8923	NM_001033213	104718	Mm.295441	NM_001033213	ENSMUSG00000033530	Ttc7b	AA408451|Ttc7l1	tetratricopeptide repeat domain 7B	protein-coding
unique_peak2-35252-7-6--0.00826409175941478-0.97990265578305	chr17	62783293	62783649	+	0	NA	Intergenic	Intergenic	447195	NM_207654	13640	Mm.7978	NM_010109		Efna5	AL-1|AV158822|EFL-5|Ephrin-A5|Epl7|LERK-7|RAGS	ephrin A5	protein-coding
unique_peak1-6829-18-1-3.31291915122835-4.8766546284749	chr8	79374480	79375222	+	0	NA	intron (NR_028579, intron 1 of 1)	L1_Mm|LINE|L1	49221	NR_028579	100039211	Mm.367571	NR_028579	ENSMUSG00000074235	Gm10649	ENSMUSG00000074235	predicted gene 10649	ncRNA
common_peak1-11199-120-120-0.634098383217155-3.5880731653202	chr15	77881849	77884346	+	0	NA	intron (NM_007583, intron 1 of 3)	intron (NM_007583, intron 1 of 3)	66613	NM_007583	12300	Mm.277338	NM_007583		Cacng2	AW060990|B230105C07Rik|B930041E13Rik|stargazer|stargazin|stg|wag|waggler	calcium channel, voltage-dependent, gamma subunit 2	protein-coding
unique_peak1-2162-9-0-3.18961340640422-3.01029995663981	chr15	60111784	60112294	+	0	NA	Intergenic	Intergenic	-263866	NM_027668	71088	Mm.425950	NM_027668	ENSMUSG00000071749	4933412E24Rik	-	RIKEN cDNA 4933412E24 gene	protein-coding
common_peak2-24253-15-12-0.311725032414564-0.425539671739611	chr16	92235128	92235707	+	0	NA	Intergenic	Intergenic	-57217	NM_134110	246133	Mm.156736	NM_134110	ENSMUSG00000039672	Kcne2	2200002I16Rik|AW048273|MiRP1	potassium voltage-gated channel, Isk-related subfamily, gene 2	protein-coding
common_peak2-20155-10-10--0.103016273628528-0.301029995663987	chr1	169732203	169732821	+	0	NA	intron (NM_033652, intron 3 of 7)	intron (NM_033652, intron 3 of 7)	112823	NM_033652	110648	Mm.330081	NM_033652	ENSMUSG00000026686	Lmx1a	Lmx1.1|dr|dreher|sst	LIM homeobox transcription factor 1 alpha	protein-coding
unique_peak2-34374-3-7--1.41398308995928-1.23214870625617	chr13	112810877	112811254	+	0	NA	Intergenic	RSINE1|SINE|B4	-211874	NM_011945	26401	Mm.15918	NM_011945	ENSMUSG00000021754	Map3k1	MAPKKK1|MEKK1|Mekk	mitogen-activated protein kinase kinase kinase 1	protein-coding
unique_peak1-1139-11-0-3.50869358425161-3.61235994796777	chr11	96925599	96926198	+	0	NA	TTS (NR_106181)	TTS (NR_106181)	816	NR_106181	102465893		NR_106181		Mir8103	mmu-mir-8103	microRNA mir-8103	ncRNA
unique_peak2-35821-1-7--2.62705701021674-1.80617997398389	chr18	64619052	64619347	+	0	NA	intron (NM_007998, intron 9 of 10)	intron (NM_007998, intron 9 of 10)	29521	NM_007998	14151	Mm.1070	NM_007998	ENSMUSG00000024588	Fech	AI894116|Fcl|fch	ferrochelatase	protein-coding
common_peak2-21294-41-40-0.343596700230576-0.641883003087205	chr11	72215191	72215891	+	0	NA	intron (NM_177776, intron 4 of 7)	intron (NM_177776, intron 4 of 7)	9674	NM_177776	276829	Mm.46732	NM_177776	ENSMUSG00000045667	Smtnl2	D130058I21Rik	smoothelin-like 2	protein-coding
common_peak2-28756-12-19--0.673152109799724-0.546772548767014	chr5	43234437	43234958	+	0	NA	Intergenic	MTEb|LTR|MaLR	-390005	NM_175937	231207	Mm.7233	NM_175937	ENSMUSG00000039782	Cpeb2	A630055H10Rik|Cpe-bp2	cytoplasmic polyadenylation element binding protein 2	protein-coding
common_peak1-17192-51-37-0.826996312158988-2.20715782907905	chr6	124740489	124741865	+	0	NA	Intergenic	B4|SINE|B4	-11441	NM_013588	16977	Mm.3207	NM_013588	ENSMUSG00000030125	Lrrc23	4921537K05Rik|B7|Lrpb7	leucine rich repeat containing 23	protein-coding
common_peak1-18537-16-4-1.7963355473807-2.18192634393779	chr8	94681239	94681952	+	0	NA	Intergenic	Intergenic	198424	NR_110452	71296	Mm.86664	NR_033641	ENSMUSG00000031736	Crnde	4933436C20Rik	colorectal neoplasia differentially expressed (non-protein coding)	ncRNA
common_peak1-17312-16-8-0.948338640825749-1.02063122982878	chr6	140547302	140548082	+	0	NA	Intergenic	Intergenic	-23492	NM_178803	11569	Mm.86453	NM_009637	ENSMUSG00000030232	Aebp2	AU023766|B230313N05Rik	AE binding protein 2	protein-coding
common_peak1-8073-14-24--0.74464002941708-0.756118839439549	chr1	177795693	177796265	+	0	NA	Intergenic	Intergenic	-14930	NM_012012	26909	Mm.283046	NM_012012	ENSMUSG00000039748	Exo1	5730442G03Rik|Msa	exonuclease 1	protein-coding
unique_peak2-33673-5-4--0.0263084308932156-0.909929411522249	chr11	101467875	101468299	+	0	NA	Intergenic	Lx3A|LINE|L1	-3927	NM_001256318	666331	Mm.303457	NM_001256318		LOC666331	-	uncharacterized LOC666331	protein-coding
unique_peak1-560-11-4-1.18676548936425-1.68134727924692	chr1	194107642	194108251	+	0	NA	intron (NM_010600, intron 6 of 10)	L1MC1|LINE|L1	93287	NM_010600	16510	Mm.4489	NM_010600	ENSMUSG00000058248	Kcnh1	EAG1|Kv10.1|M-eag	potassium voltage-gated channel, subfamily H (eag-related), member 1	protein-coding
unique_peak2-34059-2-6--1.72480917832092-1.26211192963361	chr13	63045595	63045974	+	0	NA	Intergenic	Intergenic	-20469	NM_001289926	72061	Mm.188105	NM_028079	ENSMUSG00000021458	2010111I01Rik	2300006M17Rik|AP-O|Aopep	RIKEN cDNA 2010111I01 gene	protein-coding
common_peak2-25340-68-79-0.248032684410934-0.62096275440975	chr18	77712978	77714546	+	0	NA	intron (NM_001164504, intron 3 of 7)	intron (NM_001164504, intron 3 of 7)	90113	NM_001164504	225743	Mm.23293	NM_001164504	ENSMUSG00000025427	Rnf165	2900024M11Rik|AI427432|Ark2c|G630064H08Rik|Gm96	ring finger protein 165	protein-coding
unique_peak2-36586-1-6--2.43441193227435-1.56314192529759	chr2	175605816	175606114	+	0	NA	intron (NR_040256, intron 4 of 4)	intron (NR_040256, intron 4 of 4)	-33558	NM_001177543	100039060	Mm.289463	NM_001177543		0610010B08Rik	Gm2026	RIKEN cDNA 0610010B08 gene	protein-coding
common_peak2-20329-14-18--0.348711353085941-0.360333814299795	chr10	128368510	128369328	+	0	NA	Intergenic	Intergenic	-1950	NM_008398	16404	Mm.179747	NM_008398	ENSMUSG00000025348	Itga7	[a]7|alpha7	integrin alpha 7	protein-coding
common_peak2-23633-29-14-1.20539948500659-2.32006591355686	chr15	83445713	83446386	+	0	NA	intron (NM_022723, intron 15 of 21)	intron (NM_022723, intron 15 of 21)	-20462	NM_183017	223723	Mm.46778	NM_183017	ENSMUSG00000016757	Ttll12	BC055368|D430005B17	tubulin tyrosine ligase-like family, member 12	protein-coding
common_peak1-12367-15-53--1.74272275160781-4.84405324694467	chr17	64331148	64331953	+	0	NA	intron (NM_008000, intron 6 of 13)	intron (NM_008000, intron 6 of 13)	44229	NM_008000	14158	Mm.23039	NM_008000	ENSMUSG00000000127	Fert2	AV082135|C330004K01Rik|Fer|Fert	fer (fms/fps related) protein kinase, testis specific 2	protein-coding
common_peak1-7573-119-212--0.196271699095794-0.670115726028526	chr1	46852357	46854429	+	0	NA	Intergenic	Intergenic	56961	NM_172653	227059	Mm.233889	NM_172653	ENSMUSG00000025986	Slc39a10	2900042E17Rik|5430433I10|mKIAA1265	solute carrier family 39 (zinc transporter), member 10	protein-coding
unique_peak1-6675-9-4-0.867685311516858-1.36011389749466	chr8	23157293	23157788	+	0	NA	intron (NM_007511, intron 1 of 20)	L1_Rod|LINE|L1	13006	NM_007511	11979	Mm.87854	NM_007511	ENSMUSG00000006567	Atp7b	Atp7a|WND|tx	ATPase, Cu++ transporting, beta polypeptide	protein-coding
unique_peak1-1829-11-2-1.92373108353046-2.32232533660526	chr14	34762828	34763447	+	0	NA	Intergenic	RMER17B|LTR|ERVK	-4071	NM_015745	19661	Mm.436622	NM_015745	ENSMUSG00000041534	Rbp3	Irbp|Rbp-3	retinol binding protein 3, interstitial	protein-coding
unique_peak2-35333-2-9--2.23938235115068-1.87199725847353	chr17	23679081	23679529	+	0	NA	Intergenic	Intergenic	21888	NM_001033496	449521	Mm.268582	NM_001033496	ENSMUSG00000071256	Zfp213	BC038178|D17Ertd197e	zinc finger protein 213	protein-coding
unique_peak1-6597-7-5-0.214128329577033-1.01466476204226	chr7	145043789	145044243	+	0	NA	Intergenic	Intergenic	414659	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
unique_peak1-2913-9-1-2.18961340640422-2.31132995230379	chr17	47449557	47450158	+	0	NA	intron (NM_172622, intron 2 of 16)	intron (NM_172622, intron 2 of 16)	-55979	NM_001146212	64657	Mm.216250	NM_183086	ENSMUSG00000034729	Mrps10	1110038B19Rik|AW743084|Rpms10	mitochondrial ribosomal protein S10	protein-coding
unique_peak2-35190-1-7--2.62705701021674-1.80617997398389	chr16	57526624	57526888	+	0	NA	intron (NM_001040397, intron 4 of 4)	intron (NM_001040397, intron 4 of 4)	-22599	NM_001177871	78749	Mm.328360	NM_001040397	ENSMUSG00000043336	Filip1l	4631422O05Rik|Doc1	filamin A interacting protein 1-like	protein-coding
unique_peak1-421-9-1-2.18961340640422-2.31132995230379	chr1	160926889	160927429	+	0	NA	Intergenic	Intergenic	-39590	NM_001085376	23850	Mm.458621	NM_001085376	ENSMUSG00000073530	Pappa2	PAPP-A2|PLAC3|Pappe	pappalysin 2	protein-coding
common_peak1-13974-13-9-0.456543935750406-0.53895475198017	chr2	94161359	94162106	+	0	NA	intron (NM_183106, intron 22 of 24)	intron (NM_183106, intron 22 of 24)	-60176	NR_030431	735259		NR_030431	miRBase:MI0004295	Mir670	Mirn670|mmu-mir-670	microRNA 670	ncRNA
unique_peak1-6372-8-2-1.42025991722641-1.65811743852845	chr7	67972823	67973255	+	0	NA	Intergenic	RLTR11A2|LTR|ERVK	-687934	NM_001082962	20646	Mm.274995	NM_013670	ENSMUSG00000000948	Snrpn	2410045I01Rik|HCERN3|Peg4|Pwcr1|SMN	small nuclear ribonucleoprotein N	protein-coding
common_peak2-31910-14-13-0.0918612383000403-0.332077462497413	chr9	59653611	59654113	+	0	NA	intron (NM_173018, intron 8 of 43)	RMER17C|LTR|ERVK	54881	NM_173018	270163	Mm.249545	NM_173018	ENSMUSG00000039585	Myo9a	4732465J09Rik|C130068I12Rik|C230003M11	myosin IXa	protein-coding
unique_peak2-34807-6-7--0.434601889619698-0.97990265578305	chr15	73152642	73153124	+	0	NA	intron (NM_007982, intron 5 of 31)	intron (NM_007982, intron 5 of 31)	100738	NM_007982	14083	Mm.254494	NM_007982	ENSMUSG00000022607	Ptk2	FAK|FRNK|Fadk|mKIAA4203|p125FAK	PTK2 protein tyrosine kinase 2	protein-coding
unique_peak1-2473-14-2-2.31425365963649-3.28500101358144	chr16	3713982	3714723	+	0	NA	intron (NM_019453, intron 2 of 9)	intron (NM_019453, intron 2 of 9)	3772	NM_001161790	54483	Mm.143718	NM_019453	ENSMUSG00000022534	Mefv	FMF|TRIM20|pyrin	Mediterranean fever	protein-coding
unique_peak1-919-11-4-1.18676548936425-1.68134727924692	chr11	49657874	49658470	+	0	NA	Intergenic	Intergenic	-2081	NM_001163671	26420	Mm.68933	NM_016961	ENSMUSG00000020366	Mapk9	AI851083|JNK2|Prkm9|p54aSAPK	mitogen-activated protein kinase 9	protein-coding
common_peak1-12926-17-9-0.896368243317676-1.09394599973099	chr19	5013270	5014109	+	0	NA	Intergenic	Intergenic	-10317	NM_007854	13340	Mm.4930	NM_007854	ENSMUSG00000024891	Slc29a2	Der12|Ent2|Hnp36	solute carrier family 29 (nucleoside transporters), member 2	protein-coding
common_peak2-25910-8-9--0.316705676939792-1.03275496310833	chr19	46305195	46305577	+	0	NA	intron (NM_178930, intron 3 of 39)	Lx2B|LINE|L1	-73841	NM_001177369	18034	Mm.102365	NM_019408	ENSMUSG00000025225	Nfkb2	NF-kappaB2|lyt|p49|p49/p100|p50B|p52	nuclear factor of kappa light polypeptide gene enhancer in B cells 2, p49/p100	protein-coding
common_peak1-14378-25-8-1.69192490390279-3.04993787975775	chr2	168079430	168080381	+	0	NA	Intergenic	ID_B1|SINE|B4	14926	NM_001081134	241794	Mm.425102	NM_001081134	ENSMUSG00000074575	Kcng1	AW536275|OTTMUSG00000016048	potassium voltage-gated channel, subfamily G, member 1	protein-coding
common_peak1-12537-78-115--0.0511599009670372-0.309639608274445	chr18	3382611	3384045	+	0	NA	5' UTR (NM_029402, exon 1 of 21)	5' UTR (NM_029402, exon 1 of 21)	105	NM_029402	71745	Mm.291707	NM_029402	ENSMUSG00000024231	Cul2	1300003D18Rik|4932411N15Rik|AI327301|mKIAA4106	cullin 2	protein-coding
common_peak2-27676-10-12--0.344024373132323-0.340565874754526	chr3	116594488	116594915	+	0	NA	intron (NM_009146, intron 8 of 16)	intron (NM_009146, intron 8 of 16)	30103	NM_009146	20321	Mm.66293	NM_009146	ENSMUSG00000033386	Frrs1	AI131732|Sdfr2	ferric-chelate reductase 1	protein-coding
common_peak2-30742-5-7--0.704380336005853-1.01466476204226	chr7	118532437	118532870	+	0	NA	Intergenic	L1ME3B|LINE|L1	-266464	NR_015573	75479	Mm.381620	NR_015573		1700012D14Rik	-	RIKEN cDNA 1700012D14 gene	ncRNA
common_peak1-12103-27-44--0.500307145434439-0.714193724415661	chr17	25941508	25942288	+	0	NA	Intergenic	Intergenic	-4132	NM_001164225	214931	Mm.152289	NM_001164225	ENSMUSG00000025738	Fbxl16	BC042620|Scirr1	F-box and leucine-rich repeat protein 16	protein-coding
common_peak2-29312-12-6-0.841421063030034-1.58711810488664	chr5	146250976	146251372	+	0	NA	Intergenic	Intergenic	-20582	NM_007820	13114	Mm.378905	NM_007820	ENSMUSG00000038656	Cyp3a16	-	cytochrome P450, family 3, subfamily a, polypeptide 16	protein-coding
unique_peak1-5575-14-5-1.31425365963649-1.4372489031793	chr5	148741363	148742249	+	0	NA	Intergenic	Intergenic	-27090	NM_029920	77521	Mm.244177	NM_029920	ENSMUSG00000029651	Mtus2	5730592G18Rik|A730013O20Rik|AU067634|C130038G02Rik|Cazip|Gm763|mKIAA0774	microtubule associated tumor suppressor candidate 2	protein-coding
common_peak2-31161-11-9-0.186765489364251-0.344532117358383	chr8	45529174	45529640	+	0	NA	Intergenic	Intergenic	-506155	NM_001081286	14107	Mm.27365	NM_001081286	ENSMUSG00000070047	Fat1	2310038E12Rik|AU023433|Fath|mFat1	FAT tumor suppressor homolog 1 (Drosophila)	protein-coding
common_peak1-15297-23-57--1.13621349061849-2.87721178913356	chr4	43381414	43382455	+	0	NA	intron (NM_177195, intron 24 of 28)	intron (NM_177195, intron 24 of 28)	-12920	NM_001037709	100213	Mm.235730	NM_199057	ENSMUSG00000035969	Rusc2	AI840675|mKIAA0375	RUN and SH3 domain containing 2	protein-coding
common_peak1-19248-7-7--0.200909169701811-0.97990265578305	chr9	110100680	110101163	+	0	NA	intron (NM_009211, intron 21 of 27)	B3A|SINE|B2	-45366	NM_013884	29873	Mm.38496	NM_013884	ENSMUSG00000032482	Cspg5	Caleb|Ngc	chondroitin sulfate proteoglycan 5	protein-coding
common_peak2-22503-40-47-0.0740131820299421-0.336492456843107	chr13	51975216	51977189	+	0	NA	Intergenic	Intergenic	34158	NM_011817	23882	Mm.281298	NM_011817	ENSMUSG00000021453	Gadd45g	AI327420|C86281|CR6|DDIT2|OIG37	growth arrest and DNA-damage-inducible 45 gamma	protein-coding
unique_peak2-37504-2-6--1.72480917832092-1.26211192963361	chr5	8892948	8893354	+	0	NA	promoter-TSS (NM_008830)	promoter-TSS (NM_008830)	-570	NM_008830	18670	Mm.297825	NM_008830	ENSMUSG00000042476	Abcb4	Mdr2|Pgy-2|Pgy2|mdr-2	ATP-binding cassette, sub-family B (MDR/TAP), member 4	protein-coding
common_peak2-25154-43-45-0.25900122946669-0.518540604135974	chr18	49754933	49755662	+	0	NA	Intergenic	Intergenic	72354	NR_033785	67321	Mm.245802	NR_033785		1700044K03Rik	-	RIKEN cDNA 1700044K03 gene	ncRNA
common_peak2-21697-33-32-0.286943443167075-0.49444889977478	chr11	106500875	106501659	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-27023	NM_198292	21763	Mm.102407	NM_198292	ENSMUSG00000040548	Tex2	4930568E07Rik|AI553404|Def-5|Taz4	testis expressed gene 2	protein-coding
common_peak2-28937-68-115--0.288020215829276-0.715271334082885	chr5	96996549	96998509	+	0	NA	intron (NM_175473, intron 11 of 73)	intron (NM_175473, intron 11 of 73)	194555	NM_175473	231470	Mm.291120	NM_175473	ENSMUSG00000034687	Fras1	E130113P14Rik|bl|mKIAA1500	Fraser syndrome 1 homolog (human)	protein-coding
common_peak1-9401-12-8-0.478850983645327-0.562038191119709	chr11	100440561	100441099	+	0	NA	intron (NM_001146318, intron 2 of 2)	intron (NM_001146318, intron 2 of 2)	3625	NM_001146318	12799	Mm.15711	NM_009923	ENSMUSG00000006782	Cnp	CNPase|Cnp-1|Cnp1	2',3'-cyclic nucleotide 3' phosphodiesterase	protein-coding
common_peak2-28654-6-10--0.894033508256995-1.21398586181642	chr5	31154034	31154663	+	0	NA	intron (NM_133350, intron 1 of 6)	intron (NM_133350, intron 1 of 6)	-17672	NM_144525	68796	Mm.205169	NM_144525		Tmem214	1110039B18Rik|4921530J21Rik|AI841294|AU018742|C76280	transmembrane protein 214	protein-coding
common_peak1-17876-9-17--0.980311595038092-0.844317084070804	chr7	116442794	116443320	+	0	NA	intron (NM_054103, intron 13 of 13)	L1MA6|LINE|L1	-129235	NM_057173	109594	Mm.360145	NM_057173	ENSMUSG00000036111	Lmo1	Rbtn-1|Rbtn1|Ttg1	LIM domain only 1	protein-coding
common_peak2-25560-99-162--0.129370410948426-0.419064009150694	chr19	6363534	6364898	+	0	NA	intron (NR_122118, intron 1 of 11)	CpG	526	NR_122118	22668	Mm.256422	NM_011750	ENSMUSG00000024949	Sf1	BBP|MZFM|WBP4|Zfp162	splicing factor 1	protein-coding
unique_peak2-33148-7-6--0.00826409175941478-0.97990265578305	chr10	86339898	86340370	+	0	NA	intron (NM_138673, intron 45 of 68)	RLTR13B1|LTR|ERVK	98384	NM_175331	103466	Mm.200446	NM_175331	ENSMUSG00000054027	Nt5dc3	AU040402|AW540062|C630002B14Rik|TU12B1-TY	5'-nucleotidase domain containing 3	protein-coding
common_peak2-28812-6-7--0.434601889619698-0.97990265578305	chr5	65198879	65199242	+	0	NA	intron (NM_008453, intron 1 of 5)	intron (NM_008453, intron 1 of 5)	4298	NM_008453	16599	Mm.392759	NM_008453	ENSMUSG00000029178	Klf3	9930027G08Rik|AL024007|Bklf|Tef-2	Kruppel-like factor 3 (basic)	protein-coding
common_peak2-29517-78-70-0.657073974655852-2.42477793328327	chr6	34862264	34863787	+	0	NA	Intergenic	MLT1A0|LTR|MaLR	-2194	NM_001013366	101240	Mm.152120	NM_001013366	ENSMUSG00000058486	Wdr91	9530020G05Rik|AI987683|AU018665	WD repeat domain 91	protein-coding
unique_peak2-38143-9-12--0.510826311736872-0.394412252720706	chr6	85373943	85374650	+	0	NA	exon (NM_001007472, exon 1 of 3)	exon (NM_001007472, exon 1 of 3)	416	NM_001007472	384452	Mm.347883	NM_001007472	ENSMUSG00000068302	Noto	Flh|MmNot|Not|tc	notochord homolog (Xenopus laevis)	protein-coding
common_peak1-15729-36-34-0.350038069222788-0.634705740500755	chr4	143412159	143413466	+	0	NA	Intergenic	Intergenic	-6816	NM_001005371	381569	Mm.332024	NM_001005371	ENSMUSG00000059218	Gm13084	OTTMUSG00000010328	predicted gene 13084	protein-coding
common_peak1-13352-8-10--0.454209200689727-1.078512453669	chr19	45016260	45016677	+	0	NA	exon (NM_001081225, exon 5 of 20)	exon (NM_001081225, exon 5 of 20)	10859	NM_001081225	226151	Mm.212609	NM_172638	ENSMUSG00000036097	Fam178a	3632432H19|6030443O07Rik|AU014917	family with sequence similarity 178, member A	protein-coding
common_peak2-22427-21-18-0.32156175182265-0.48779450977742	chr13	37784508	37785101	+	0	NA	Intergenic	L1MB3|LINE|L1	-133103	NM_026830	68750	Mm.491109	NM_026830	ENSMUSG00000039087	Rreb1	1110037N09Rik|AA414966|B930013M22Rik	ras responsive element binding protein 1	protein-coding
common_peak1-8556-10-9-0.0344872501214071-1.05503135781948	chr10	93641654	93642118	+	0	NA	intron (NM_011629, intron 9 of 13)	L1Md_A|LINE|L1	-19868	NM_025551	66414	Mm.27886	NM_025551	ENSMUSG00000020022	Ndufa12	2410011G03Rik|AW112974	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 12	protein-coding
common_peak1-7467-7-14--1.10779976531033-0.817533494790411	chr1	161071013	161071538	+	0	NA	Intergenic	MER63D|DNA|AcHobo	-91182	NM_011931	26374	Mm.328135	NM_011931	ENSMUSG00000040782	Rfwd2	AI316802|C80879|Cop1	ring finger and WD repeat domain 2	protein-coding
common_peak2-20176-34-37-0.134141013557681-0.369793428364259	chr1	171410852	171411918	+	0	NA	Intergenic	Intergenic	50210	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
unique_peak2-36600-2-7--1.91745425626332-1.45399745587252	chr2	177252170	177252603	+	0	NA	intron (NM_001177568, intron 1 of 3)	intron (NM_001177568, intron 1 of 3)	2939	NM_001177568	628308	Mm.460436	NM_001177568		Gm14420	OTTMUSG00000016588	predicted gene 14420	protein-coding
unique_peak1-7431-15-4-1.69023665566829-1.97518968347063	chrX	167091350	167092051	+	0	NA	Intergenic	Intergenic	-674851	NR_029457	654820	Mm.34441	NM_001039559	ENSMUSG00000072844	G530011O06Rik	-	RIKEN cDNA G530011O06 gene	ncRNA
unique_peak1-537-17-9-0.896368243317676-1.09394599973099	chr1	189784781	189785747	+	0	NA	intron (NM_001243792, intron 2 of 7)	B2_Mm1t|SINE|B2	-36442	NM_011935	26381	Mm.89989	NM_011935	ENSMUSG00000026610	Esrrg	ERR3|Errg|NR3B3|mKIAA0832	estrogen-related receptor gamma	protein-coding
unique_peak2-36468-5-7--0.704380336005853-1.01466476204226	chr2	144330875	144331378	+	0	NA	intron (NM_172859, intron 7 of 20)	intron (NM_172859, intron 7 of 20)	22008	NM_172859	241688	Mm.442156	NM_172859	ENSMUSG00000037259	Dzank1	2810039F03Rik|6330439K17Rik|6430408C01|AI851115|Ankrd64	double zinc ribbon and ankyrin repeat domains 1	protein-coding
unique_peak1-3867-17-2-2.63333383748388-3.75443312462699	chr2	9972521	9973310	+	0	NA	Intergenic	Intergenic	-2679	NM_027748	209361	Mm.86343	NM_027748	ENSMUSG00000025782	Taf3	140kDa|4933439M23Rik|AW539625|TAF140|TAFII-140|TAFII140|mTAFII140	TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor	protein-coding
common_peak1-7555-72-64-0.646215999843863-2.20680251592002	chr1	39367317	39368822	+	0	NA	intron (NM_008719, intron 5 of 20)	intron (NM_008719, intron 5 of 20)	-56627	NM_053257	114641	Mm.379302	NM_053257	ENSMUSG00000073702	Rpl31	-	ribosomal protein L31	protein-coding
common_peak2-31132-14-13-0.0918612383000403-0.332077462497413	chr8	34763233	34763878	+	0	NA	promoter-TSS (NM_010344)	promoter-TSS (NM_010344)	-155	NM_010344	14782	Mm.283573	NM_010344	ENSMUSG00000031584	Gsr	AI325518|D8Ertd238e|Gr-1|Gr1	glutathione reductase	protein-coding
unique_peak2-34572-8-11--0.579740082773585-1.14218153353838	chr14	66296630	66297342	+	0	NA	intron (NM_001168318, intron 2 of 7)	B4|SINE|B4	11746	NM_001168318	71145	Mm.83840	NM_028903	ENSMUSG00000022032	Scara5	4932433F15Rik|4933425F03Rik|AV278087|Tesr	scavenger receptor class A, member 5 (putative)	protein-coding
common_peak1-11861-29-13-1.30493515855751-2.5745355257554	chr16	92234809	92235940	+	0	NA	Intergenic	Intergenic	-57260	NM_134110	246133	Mm.156736	NM_134110	ENSMUSG00000039672	Kcne2	2200002I16Rik|AW048273|MiRP1	potassium voltage-gated channel, Isk-related subfamily, gene 2	protein-coding
common_peak1-8868-24-10-1.33377828413042-2.22881803703862	chr11	35950956	35951991	+	0	NA	intron (NM_011856, intron 12 of 28)	intron (NM_011856, intron 12 of 28)	-157882	NM_170779	211652	Mm.31267	NM_170779		Wwc1	AA408228|AU017197|BC037006|Kibra|mKIAA0869	WW, C2 and coiled-coil domain containing 1	protein-coding
common_peak1-14899-20-40--0.869477220026891-1.45230360914611	chr3	96414097	96414847	+	0	NA	intron (NR_003619, intron 1 of 1)	B3|SINE|B2	9416	NM_001163170	280411	Mm.482147	NM_001163170	ENSMUSG00000049288	Lix1l	D130027M04Rik	Lix1-like	protein-coding
common_peak1-19407-10-12--0.344024373132323-0.340565874754526	chrX	73467895	73468365	+	0	NA	Intergenic	L1_Mur2|LINE|L1	-41515	NM_001013760	238829	Mm.292319	NM_001013760	ENSMUSG00000071738	Gm4937	EG238829	predicted gene 4937	protein-coding
common_peak2-25589-60-71-0.184366860178219-0.472909071679608	chr19	7493602	7495263	+	0	NA	intron (NM_175381, intron 1 of 4)	intron (NM_175381, intron 1 of 4)	2317	NM_175381	108899	Mm.386838	NM_175381	ENSMUSG00000053080	2700081O15Rik	AI255177|AI848741|AW742297	RIKEN cDNA 2700081O15 gene	protein-coding
common_peak2-25578-15-18--0.235762762887929-0.326591483156968	chr19	7039344	7040020	+	0	NA	intron (NM_008874, intron 8 of 30)	intron (NM_008874, intron 8 of 30)	4622	NM_008874	18797	Mm.273204	NM_008874	ENSMUSG00000024960	Plcb3	mKIAA4098	phospholipase C, beta 3	protein-coding
common_peak2-27975-8-4-0.683294323060208-1.21878474469819	chr4	43383284	43383636	+	0	NA	exon (NM_177195, exon 26 of 29)	exon (NM_177195, exon 26 of 29)	-11394	NM_001037709	100213	Mm.235730	NM_199057	ENSMUSG00000035969	Rusc2	AI840675|mKIAA0375	RUN and SH3 domain containing 2	protein-coding
common_peak1-14802-19-12-0.702247608520594-0.840839978588874	chr3	90082477	90083228	+	0	NA	intron (NM_201407, intron 24 of 27)	B1_Mur1|SINE|Alu	8781	NR_105979	102465612		NR_105979		Mir7012	mmu-mir-7012	microRNA mir-7012	ncRNA
unique_peak1-1562-10-3-1.35641534500877-1.75805390616669	chr13	29361974	29362597	+	0	NA	Intergenic	Intergenic	254161	NR_045075	77920	Mm.197051	NR_045073	ENSMUSG00000086363	A330102I10Rik	-	RIKEN cDNA A330102I10 gene	ncRNA
common_peak2-23897-108-157-0.0663962132309663-0.344194136952484	chr16	4213241	4214629	+	0	NA	promoter-TSS (NM_001025432)	promoter-TSS (NM_001025432)	-531	NM_001025432	12914	Mm.132238	NM_001025432	ENSMUSG00000022521	Crebbp	AW558298|CBP|CBP/p300|KAT3A|p300/CBP	CREB binding protein	protein-coding
unique_peak1-7108-9-5-0.604650905683064-1.21398586181642	chr9	43262526	43262985	+	0	NA	Intergenic	Intergenic	143909	NM_023655	72169	Mm.273277	NM_023655	ENSMUSG00000032013	Trim29	1110047J21Rik|2810431N19Rik|4732461M22Rik|AI119726	tripartite motif-containing 29	protein-coding
common_peak1-16116-8-7-0.00522241794757061-1.00793137938329	chr5	66077368	66077870	+	0	NA	intron (NM_001081321, intron 2 of 31)	RSINE1|SINE|B4	11476	NM_001081321	71521	Mm.278974	NM_027818	ENSMUSG00000029202	Pds5a	9030416H16Rik|E230024D05Rik|mKIAA0648	PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	protein-coding
unique_peak1-2493-9-3-1.18961340640422-1.57096726280955	chr16	10838115	10838736	+	0	NA	intron (NM_001162932, intron 1 of 1)	intron (NM_001162932, intron 1 of 1)	3273	NM_001162932	223970	Mm.325777	NM_001033278	ENSMUSG00000037991	Rmi2	A630055G03Rik|Gm537|Gm929	RMI2, RecQ mediated genome instability 2, homolog (S. cerevisiae)	protein-coding
common_peak2-26835-24-31--0.206790097232283-0.334168439396943	chr2	152827629	152829028	+	0	NA	intron (NM_001083618, intron 13 of 14)	MIRb|SINE|MIR	12791	NM_178939	68559	Mm.12746	NM_178939	ENSMUSG00000027472	Pdrg1	1110004D19Rik|AU020945|AV006589|Pdrg	p53 and DNA damage regulated 1	protein-coding
unique_peak2-38849-3-6--1.22133801201688-1.08602067057793	chr7	143829727	143830149	+	0	NA	Intergenic	L1_Mus3|LINE|L1	72349	NR_046021	621677	Mm.207290	NR_046021		Gm6249	EG621677	predicted gene 6249	ncRNA
common_peak1-13045-41-21-1.24171708621136-3.2524299487632	chr19	5806061	5807767	+	0	NA	Intergenic	Intergenic	-4243	NR_002847	72289	Mm.298256	NR_002847	ENSMUSG00000092341	Malat1	2210401K01Rik|9430072K23Rik|AI647968|Neat2	metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA)	ncRNA
common_peak2-19658-59-81--0.0321880037455058-0.302378744963234	chr1	52499803	52501052	+	0	NA	Intergenic	Intergenic	56865	NM_008667	17936	Mm.25903	NM_008667	ENSMUSG00000002881	Nab1	-	Ngfi-A binding protein 1	protein-coding
common_peak2-22082-9-8-0.0196884049619079-1.03275496310833	chr12	78226937	78227553	+	0	NA	Intergenic	B1F|SINE|Alu	-111846	NM_001252614	53618	Mm.35628	NM_016893	ENSMUSG00000021065	Fut8	-	fucosyltransferase 8	protein-coding
common_peak1-14984-21-13-0.762134343208631-1.0220094258199	chr3	107717448	107718423	+	0	NA	Intergenic	Intergenic	16728	NM_026672	68312	Mm.458189	NM_026672	ENSMUSG00000004035	Gstm7	0610005A07Rik|AI894236|Cd203c	glutathione S-transferase, mu 7	protein-coding
unique_peak2-33145-1-5--2.2120195109379-1.32905871926422	chr10	84530557	84530959	+	0	NA	Intergenic	Intergenic	34482	NM_010214	14202	Mm.46163	NM_010214	ENSMUSG00000050035	Fhl4	-	four and a half LIM domains 4	protein-coding
common_peak1-15396-7-3-0.799090830298189-1.23214870625617	chr4	82470907	82471420	+	0	NA	intron (NM_026647, intron 6 of 8)	intron (NM_026647, intron 6 of 8)	34402	NM_026647	68268	Mm.32047	NM_026647	ENSMUSG00000028403	Zdhhc21	9130404H11Rik|AL024349|D130004H04Rik|dep	zinc finger, DHHC domain containing 21	protein-coding
unique_peak1-6208-24-14-0.886319307159198-1.33403699391683	chr7	45726726	45727968	+	0	NA	Intergenic	Intergenic	792557	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak2-25965-10-11--0.228547155712387-0.31137425193576	chr19	53143067	53143529	+	0	NA	Intergenic	HAL1-3A_ME|LINE|L1	-7444	NR_045320	78457	Mm.76932	NR_045320		1700054A03Rik	-	RIKEN cDNA 1700054A03 gene	ncRNA
common_peak1-11535-11-18--0.739233929191972-0.671582559449692	chr16	4684022	4684560	+	0	NA	exon (NM_023646, exon 1 of 12)	exon (NM_023646, exon 1 of 12)	221	NM_001135112	83945	Mm.248337	NM_023646	ENSMUSG00000004069	Dnaja3	1200003J13Rik|1810053A11Rik|C81173|Tid-1|Tid1l	DnaJ (Hsp40) homolog, subfamily A, member 3	protein-coding
unique_peak2-33443-4-7--1.02346051385325-1.09384600808989	chr11	62147396	62147933	+	0	NA	intron (NM_011308, intron 35 of 44)	intron (NM_011308, intron 35 of 44)	52689	NM_029704	72795	Mm.489722	NM_028360	ENSMUSG00000042298	Ttc19	2010204O13Rik|2810460C24Rik|AI505442	tetratricopeptide repeat domain 19	protein-coding
common_peak1-10488-8-29--1.90166817766095-3.04993787975775	chr13	119488545	119489185	+	0	NA	Intergenic	L1M5|LINE|L1	-14641	NM_008002	14165	Mm.317323	NM_008002	ENSMUSG00000021732	Fgf10	AEY17|BB213776|Fgf-10|Gsfaey17	fibroblast growth factor 10	protein-coding
unique_peak1-7308-7-0-2.79909083029819-2.40823996531185	chr9	117714132	117714681	+	0	NA	Intergenic	Intergenic	-175375	NM_001172121	207181	Mm.326411	NM_178660	ENSMUSG00000039607	Rbms3	6720477E09Rik|8430436O14Rik	RNA binding motif, single stranded interacting protein	protein-coding
unique_peak1-2999-9-5-0.604650905683064-1.21398586181642	chr17	83957965	83958421	+	0	NA	Intergenic	(TTTC)n|Simple_repeat|Simple_repeat	-44520	NM_001159529	20463	Mm.30072	NM_009187	ENSMUSG00000024248	Cox7a2l	COX7AR|COX7RP|EB1|SIG-81|SIG81|Silg81	cytochrome c oxidase subunit VIIa polypeptide 2-like	protein-coding
common_peak2-23586-14-8-0.729291158915332-0.771068449301682	chr15	80082816	80083357	+	0	NA	3' UTR (NM_178719, exon 6 of 6)	3' UTR (NM_178719, exon 6 of 6)	-2528	NM_001287180	11911	Mm.641	NM_009716	ENSMUSG00000042406	Atf4	Atf-4|C/ATF|CREB2|TAXREB67	activating transcription factor 4	protein-coding
common_peak1-15921-12-7-0.648775985087639-0.697979855752659	chr5	24451224	24451712	+	0	NA	intron (NM_145401, intron 4 of 15)	intron (NM_145401, intron 4 of 15)	-37141	NM_001170556	108099	Mm.33649	NM_145401	ENSMUSG00000028944	Prkag2	2410051C13Rik|AAKG|AAKG2|AI854673|H91620p|WPWS	protein kinase, AMP-activated, gamma 2 non-catalytic subunit	protein-coding
common_peak2-32171-96-140-0.0264998619565349-0.313264047545147	chr9	110879063	110882053	+	0	NA	intron (NM_028838, intron 6 of 8)	B1_Mus1|SINE|Alu	11659	NM_153100	235636	Mm.441138	NM_153100		Rtp3	Tmem7	receptor transporter protein 3	protein-coding
common_peak1-15959-11-2-1.92373108353046-2.32232533660526	chr5	31154534	31155154	+	0	NA	intron (NM_133350, intron 1 of 6)	intron (NM_133350, intron 1 of 6)	-17176	NM_144525	68796	Mm.205169	NM_144525		Tmem214	1110039B18Rik|4921530J21Rik|AI841294|AU018742|C76280	transmembrane protein 214	protein-coding
common_peak2-27002-128-198-0.0283813815344267-0.314568204392608	chr2	170510819	170512456	+	0	NA	Intergenic	RSINE1|SINE|B4	-45670	NM_029761	76829	Mm.41633	NM_029761	ENSMUSG00000027560	Dok5	2700055C10Rik	docking protein 5	protein-coding
unique_peak1-2024-14-3-1.89921616035764-2.80787975886178	chr15	10771051	10771837	+	0	NA	Intergenic	MIRb|SINE|MIR	12638	NR_040357	100502601	Mm.399434	NR_040357		Gm19276	-	predicted gene, 19276	ncRNA
unique_peak2-35471-4-11--1.6084230145744-1.68134727924692	chr17	44078749	44079404	+	0	NA	intron (NM_001286653, intron 2 of 4)	L1Md_A|LINE|L1	-10872	NM_001286654	53901	Mm.251242	NM_030598	ENSMUSG00000039601	Rcan2	Csp2|Dscr1l1|MCIP2|ZAKI-4	regulator of calcineurin 2	protein-coding
common_peak1-12744-12-6-0.841421063030034-1.58711810488664	chr18	57059274	57059749	+	0	NA	intron (NM_177115, intron 1 of 4)	intron (NM_177115, intron 1 of 4)	25691	NM_177115	320253	Mm.312623	NM_177115	ENSMUSG00000032656	March3	6330411I15Rik|A530081L18Rik|AI843639|MARCH-III	membrane-associated ring finger (C3HC4) 3	protein-coding
common_peak1-10232-37-43-0.0665614528485214-0.322992865635707	chr13	51975385	51977174	+	0	NA	Intergenic	Intergenic	34235	NM_011817	23882	Mm.281298	NM_011817	ENSMUSG00000021453	Gadd45g	AI327420|C86281|CR6|DDIT2|OIG37	growth arrest and DNA-damage-inducible 45 gamma	protein-coding
unique_peak1-82-7-0-2.79909083029819-2.40823996531185	chr1	40276514	40276970	+	0	NA	Intergenic	Intergenic	-5183	NM_008362	16177	Mm.896	NM_008362	ENSMUSG00000026072	Il1r1	CD121a|CD121b|IL-iR|Il1r-1	interleukin 1 receptor, type I	protein-coding
common_peak2-19738-36-36-0.269867720538804-0.51862626278861	chr1	74295190	74297144	+	0	NA	intron (NM_029711, intron 3 of 9)	intron (NM_029711, intron 3 of 9)	13043	NM_029711	76709	Mm.337038	NM_029711	ENSMUSG00000006304	Arpc2	2210023N03Rik|34kDa|p34-Arc	actin related protein 2/3 complex, subunit 2	protein-coding
unique_peak2-34489-3-6--1.22133801201688-1.08602067057793	chr14	41019633	41019914	+	0	NA	Intergenic	L1Md_F2|LINE|L1	550822	NR_045936	73591	Mm.65499	NR_045936		1700109I08Rik	-	RIKEN cDNA 1700109I08 gene	ncRNA
common_peak2-24301-10-6-0.549060422951165-1.21398586181642	chr17	27082739	27083129	+	0	NA	intron (NM_001281491, intron 2 of 18)	intron (NM_001281491, intron 2 of 18)	2130	NR_037244	100526534		NR_037244	miRBase:MI0014046	Mir3083	mmu-mir-3083	microRNA 3083	ncRNA
common_peak2-20443-85-138--0.163537824598857-0.463553417341568	chr10	36974073	36975203	+	0	NA	Intergenic	Intergenic	-115906	NM_008538	17118	Mm.30059	NM_008538	ENSMUSG00000069662	Marcks	Macs|PKCSL	myristoylated alanine rich protein kinase C substrate	protein-coding
common_peak2-31387-28-18-0.805031606377877-1.27334590136207	chr8	86500979	86501644	+	0	NA	intron (NM_001277898, intron 1 of 9)	intron (NM_001277898, intron 1 of 9)	529	NM_001277898	18747	Mm.19111	NM_008854	ENSMUSG00000005469	Prkaca	PKCD|Pkaca	protein kinase, cAMP dependent, catalytic, alpha	protein-coding
common_peak1-12089-23-26--0.0331199976543877-0.301029995663988	chr17	24735611	24736488	+	0	NA	exon (NM_011647, exon 35 of 41)	exon (NM_011647, exon 35 of 41)	33523	NM_011647	22084	Mm.30435	NM_011647	ENSMUSG00000002496	Tsc2	Nafld|Tcs2	tuberous sclerosis 2	protein-coding
common_peak1-8689-28-45--0.470602836235551-0.703513783457792	chr11	49249894	49251096	+	0	NA	Intergenic	Intergenic	6566	NM_147066	259069	Mm.377820	NM_147066	ENSMUSG00000046575	Olfr1389	MOR256-1	olfactory receptor 1389	protein-coding
common_peak1-8956-14-24--0.74464002941708-0.756118839439549	chr11	54955524	54956250	+	0	NA	intron (NM_172258, intron 5 of 10)	(A)n|Simple_repeat|Simple_repeat	9321	NM_172258	215332	Mm.87054	NM_172258	ENSMUSG00000049491	Slc36a3	PAT3|TRAMD2|tramdorin2	solute carrier family 36 (proton/amino acid symporter), member 3	protein-coding
unique_peak2-39581-4-8--1.19338551529556-1.21878474469819	chr9	75767850	75768213	+	0	NA	Intergenic	L1Md_T|LINE|L1	-94753	NM_173731	208982	Mm.82306	NM_173731	ENSMUSG00000007908	Hmgcll1	BC037381	3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1	protein-coding
unique_peak1-871-9-0-3.18961340640422-3.01029995663981	chr11	28849609	28850143	+	0	NA	Intergenic	Intergenic	96671	NM_146015	216616	Mm.44176	NM_146015	ENSMUSG00000020467	Efemp1	-	epidermal growth factor-containing fibulin-like extracellular matrix protein 1	protein-coding
common_peak1-11093-9-9--0.132314688483142-1.03275496310833	chr15	59649817	59650257	+	0	NA	Intergenic	Intergenic	-23523	NR_045076	100503021	Mm.402924	NR_045076		Gm19510	-	predicted gene, 19510	ncRNA
common_peak2-25227-9-6-0.382258484346616-1.11707584880836	chr18	62032485	62032921	+	0	NA	intron (NM_001164491, intron 2 of 23)	intron (NM_001164491, intron 2 of 23)	38775	NM_198649	319713	Mm.329478	NM_198649	ENSMUSG00000032735	Ablim3	AW990719|D930036B08Rik	actin binding LIM protein family, member 3	protein-coding
unique_peak1-2400-12-4-1.32684789020028-2.04196296489515	chr15	98295600	98296374	+	0	NA	Intergenic	Intergenic	9244	NM_146280	258277	Mm.222977	NM_146280	ENSMUSG00000032987	Olfr281	MOR160-5	olfactory receptor 281	protein-coding
common_peak2-29209-8-8--0.164702583494742-1.00793137938329	chr5	137080599	137081043	+	0	NA	Intergenic	B4A|SINE|B4	-37461	NM_001291238	13047	Mm.320317	NM_009986	ENSMUSG00000029705	Cux1	CDP|Cutl1|Cux|Cux-1	cut-like homeobox 1	protein-coding
unique_peak2-37912-4-9--1.34538860874061-1.36011389749466	chr5	144126801	144127117	+	0	NA	intron (NM_133355, intron 1 of 20)	PB1D10|SINE|Alu	1372	NM_133355	170935	Mm.197460	NM_133355	ENSMUSG00000010825	Grid2ip	-	glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein 1	protein-coding
common_peak1-12209-32-37-0.0311645057760748-0.312460117298692	chr17	33909252	33910266	+	0	NA	Intergenic	Intergenic	8761	NM_020581	57875	Mm.196189	NM_020581		Angptl4	Arp4|Bk89|Fiaf|Hfarp|Ng27|Pgar|Pgarg|Pp1158	angiopoietin-like 4	protein-coding
common_peak1-8443-23-37--0.526160008934505-0.720235944639228	chr10	79097012	79097908	+	0	NA	intron (NM_001024539, intron 1 of 12)	intron (NM_001024539, intron 1 of 12)	3203	NM_001024539	216148	Mm.39424	NM_001024539	ENSMUSG00000020312	Shc2	6720466E06|SCK|ShcB|Sli	SHC (Src homology 2 domain containing) transforming protein 2	protein-coding
unique_peak1-2427-11-1-2.50869358425161-2.83420869758413	chr15	101188706	101189222	+	0	NA	intron (NM_028770, intron 4 of 8)	intron (NM_028770, intron 4 of 8)	-10819	NR_035462	100316694		NR_035462	miRBase:MI0009930	Mir1941	mmu-mir-1941	microRNA 1941	ncRNA
common_peak1-13385-27-24-0.347689761120511-0.550049347815233	chr19	46689595	46690453	+	0	NA	intron (NM_001177812, intron 2 of 4)	intron (NM_001177812, intron 2 of 4)	-7867	NM_001177813	226178	Mm.329895	NM_146099	ENSMUSG00000047731	Wbp1l	D19Wsu162e|Opal1	WW domain binding protein 1 like	protein-coding
common_peak2-22900-25-35--0.308075096097206-0.423354874519378	chr14	33446495	33447295	+	0	NA	intron (NM_001001796, intron 5 of 6)	intron (NM_001001796, intron 5 of 6)	33782	NM_001001796	107751	Mm.119274	NM_001001796	ENSMUSG00000041730	Prrxl1	Drg11|Drgx	paired related homeobox protein-like 1	protein-coding
common_peak1-11140-12-12--0.0516637330534535-0.309718203022949	chr15	73149001	73149573	+	0	NA	intron (NM_007982, intron 7 of 31)	intron (NM_007982, intron 7 of 31)	104334	NM_007982	14083	Mm.254494	NM_007982	ENSMUSG00000022607	Ptk2	FAK|FRNK|Fadk|mKIAA4203|p125FAK	PTK2 protein tyrosine kinase 2	protein-coding
common_peak2-19539-3-10--1.87341470859657-1.75805390616669	chr1	90914529	90915072	+	0	NA	intron (NR_040471, intron 2 of 2)	intron (NR_040471, intron 2 of 2)	2112	NR_040471	73475	Mm.491040	NR_040471		1700067G17Rik	-	RIKEN cDNA 1700067G17 gene	ncRNA
common_peak1-15055-14-23--0.685746340363512-0.669502273696327	chr3	122983818	122984584	+	0	NA	intron (NM_027135, intron 3 of 22)	Lx8|LINE|L1	13787	NM_027135	69608	Mm.29293	NM_027135	ENSMUSG00000039234	Sec24d	2310020L09Rik|Gm1349	Sec24 related gene family, member D (S. cerevisiae)	protein-coding
common_peak1-10937-131-183-0.181677903677581-0.675773241804376	chr15	12116606	12119149	+	0	NA	Intergenic	ORR1C1|LTR|MaLR	16630	NR_035443	100316684		NR_035443		Mir1898	Mirn1898|mmu-mir-1898	microRNA 1898	ncRNA
common_peak2-30311-7-6--0.00826409175941478-0.97990265578305	chr7	19953023	19953335	+	0	NA	intron (NM_001010836, intron 1 of 12)	B3A|SINE|B2	6614	NM_001010836	333654	Mm.333640	NM_001010836	ENSMUSG00000040734	Ppp1r13l	AV260376|IASPP|Nkip1|wa3	protein phosphatase 1, regulatory (inhibitor) subunit 13 like	protein-coding
unique_peak2-36025-12-8-0.478850983645327-0.562038191119709	chr19	42688498	42688966	+	0	NA	Intergenic	Intergenic	-1436	NM_053083	67573	Mm.178767	NM_053083	ENSMUSG00000025185	Loxl4	4833426I20Rik|Loxc	lysyl oxidase-like 4	protein-coding
common_peak2-27771-11-6-0.701338662194009-1.32595962126035	chr3	132799725	132800071	+	0	NA	Intergenic	L1MD2|LINE|L1	44981	NM_027927	71793	Mm.246726	NM_027927	ENSMUSG00000028016	Ints12	1110020M19Rik|2810027J24Rik|4930529N21Rik|A230056J18Rik|AI666778|Phf22	integrator complex subunit 12	protein-coding
common_peak1-9709-17-22--0.305265617851975-0.348739088570342	chr12	28749866	28750660	+	0	NA	Intergenic	Intergenic	482939	NM_001177964	68511	Mm.310284	NM_001177964		Dcdc2c	1110015M06Rik	doublecortin domain containing 2C	protein-coding
unique_peak1-6849-13-6-0.971117108580164-1.01572999746118	chr8	84750838	84751527	+	0	NA	Intergenic	Intergenic	175303	NM_001254747	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
unique_peak2-39305-14-27--0.908138761699959-1.05601013496724	chr8	123948888	123949782	+	0	NA	Intergenic	PB1D7|SINE|Alu	116519	NM_029597	76405	Mm.165697	NM_029597	ENSMUSG00000031809	1700018B08Rik	1700084O22Rik	RIKEN cDNA 1700018B08 gene	protein-coding
unique_peak1-1011-7-2-1.21412832957703-1.45399745587252	chr11	74183950	74184437	+	0	NA	Intergenic	Intergenic	6020	NM_001011851	258153	Mm.376124	NM_001011851	ENSMUSG00000058275	Olfr412	MOR127-5P	olfactory receptor 412	protein-coding
common_peak2-32092-38-40-0.213900654680447-0.459173512026158	chr9	97110267	97111582	+	0	NA	Intergenic	Intergenic	-99464	NM_138756	192287	Mm.228067	NM_138756	ENSMUSG00000032449	Slc25a36	C330005L02Rik	solute carrier family 25, member 36	protein-coding
common_peak1-19219-43-60--0.148174152039184-0.348250801558508	chr9	106429029	106430151	+	0	NA	Intergenic	Intergenic	12686	NM_029300	75470	Mm.63799	NM_029300	ENSMUSG00000066382	Iqcf5	1700007L12Rik	IQ motif containing F5	protein-coding
unique_peak2-38796-8-13--0.802132504110034-0.562038191119711	chr7	130755478	130756195	+	0	NA	Intergenic	RSINE1|SINE|B4	-111873	NM_001081329	210162	Mm.135397	NM_175435	ENSMUSG00000030757	Zkscan2	9430065N20Rik|AW493225|Zfp694	zinc finger with KRAB and SCAN domains 2	protein-coding
common_peak2-32409-12-7-0.648775985087639-0.697979855752659	chrX	155193049	155193446	+	0	NA	Intergenic	Intergenic	-500467	NM_148945	110651	Mm.328476	NM_148945	ENSMUSG00000031309	Rps6ka3	C130006E23|MAPKAPK-1b|MPK-9|Rsk2|S6K-alpha3|p90RSK3|pp90RSK2	ribosomal protein S6 kinase polypeptide 3	protein-coding
common_peak2-31193-9-18--1.05831410703937-0.965105923112245	chr8	57505078	57505742	+	0	NA	Intergenic	Intergenic	880351	NM_175939	244486	Mm.67684	NM_175939	ENSMUSG00000046258	Adam29	-	a disintegrin and metallopeptidase domain 29	protein-coding
common_peak2-25172-6-6--0.241956811677302-0.947717972411649	chr18	54828526	54828914	+	0	NA	Intergenic	Intergenic	57322	NR_045400	328957	Mm.402781	NR_045400		9330117O12Rik	9330117O12	RIKEN cDNA 9330117O12 gene	ncRNA
common_peak2-32304-12-11-0.0638134843664826-0.337263207250336	chrX	47891754	47892460	+	0	NA	Intergenic	L1_Mus3|LINE|L1	96328	NR_015505	103012	Mm.482523	NR_015505		Firre	5830467J12Rik|6720401G13Rik|AW048145	functional intergenic repeating RNA element	ncRNA
unique_peak2-38259-11-10-0.0492619656143161-0.31137425193576	chr6	125323233	125323794	+	0	NA	intron (NM_198604, intron 8 of 16)	intron (NM_198604, intron 8 of 16)	7009	NM_198604	213522	Mm.333396	NM_198604	ENSMUSG00000038167	Plekhg6	BC026778|Gm155	pleckstrin homology domain containing, family G (with RhoGef domain) member 6	protein-coding
common_peak2-29071-12-13--0.158578936969966-0.301029995663979	chr5	117976756	117977201	+	0	NA	intron (NM_001114545, intron 3 of 19)	intron (NM_001114545, intron 3 of 19)	112967	NM_001114545	333050	Mm.437947	NM_001034873	ENSMUSG00000061578	Ksr2	-	kinase suppressor of ras 2	protein-coding
common_peak1-8380-25-21-0.402418286707809-0.580176690544129	chr10	62110444	62111251	+	0	NA	intron (NM_053183, intron 1 of 14)	ID_B1|SINE|B4	3099	NM_053183	94213	Mm.114116	NM_053183	ENSMUSG00000020076	Ddx50	4933429B04Rik|8430408E17Rik|GU2|RH-II	DEAD (Asp-Glu-Ala-Asp) box polypeptide 50	protein-coding
unique_peak1-3201-14-0-3.89921616035764-4.8164799306237	chr18	54971304	54971845	+	0	NA	Intergenic	Intergenic	178260	NM_175751	269023	Mm.192984	NM_175751	ENSMUSG00000052713	Zfp608	4932417D18Rik|D430007A19Rik|Znf608	zinc finger protein 608	protein-coding
unique_peak1-1560-12-0-3.64877598508764-4.21441993929574	chr13	28756569	28757003	+	0	NA	intron (NR_045053, intron 5 of 8)	intron (NR_045053, intron 5 of 8)	45956	NR_105787	102466635		NR_105787	miRBase:MI0021897	Mir6368	mmu-mir-6368	microRNA mir-6368	ncRNA
common_peak2-28591-19-69--1.72659569028328-6.159096206166	chr5	20701567	20702970	+	0	NA	intron (NM_175437, intron 3 of 30)	B1_Mur3|SINE|Alu	10183	NM_175437	212167	Mm.121705	NM_175437	ENSMUSG00000039934	Gsap	A530088I07Rik|Pion	gamma-secretase activating protein	protein-coding
unique_peak2-37018-1-7--2.62705701021674-1.80617997398389	chr3	126273259	126273559	+	0	NA	Intergenic	B3|SINE|B2	-26460	NM_001293663	108058	Mm.255822	NM_023813	ENSMUSG00000053819	Camk2d	2810011D23Rik|8030469K03Rik|CaMK II|[d]-CaMKII	calcium/calmodulin-dependent protein kinase II, delta	protein-coding
common_peak2-28436-5-8--0.874305337448166-1.10484139239135	chr4	149170117	149170508	+	0	NA	Intergenic	PB1D10|SINE|Alu	-21936	NM_027460	70556	Mm.41877	NM_027460	ENSMUSG00000028982	Slc25a33	5730438N18Rik|Pnc1	solute carrier family 25, member 33	protein-coding
common_peak1-16340-13-7-0.778472030637769-0.817533494790411	chr5	118424752	118425239	+	0	NA	Intergenic	RMER16|LTR|ERVK	-1784	NM_145564	231670	Mm.21912	NM_145564	ENSMUSG00000032898	Fbxo21	2810425J22Rik|AU016673|mKIAA0875	F-box protein 21	protein-coding
common_peak1-16042-23-30--0.232428805877794-0.363124929330844	chr5	36748050	36748934	+	0	NA	Intergenic	Intergenic	-7704	NM_030889	81840	Mm.34113	NM_030889	ENSMUSG00000029093	Sorcs2	N28137|mKIAA1329	sortilin-related VPS10 domain containing receptor 2	protein-coding
common_peak2-23003-20-36--0.721378581037757-1.04213512323541	chr14	60428213	60429613	+	0	NA	intron (NM_015803, intron 26 of 35)	intron (NM_015803, intron 26 of 35)	184795	NM_145463	219134	Mm.275409	NM_145463	ENSMUSG00000044461	Shisa2	9430059P22Rik|MAd2|Tmem46|mShisa|shisa	shisa homolog 2 (Xenopus laevis)	protein-coding
common_peak1-11838-19-11-0.81772482594053-0.991115276827166	chr16	87348676	87349617	+	0	NA	Intergenic	Intergenic	-5284	NM_001159331	67768	Mm.296532	NM_026366	ENSMUSG00000044442	N6amt1	5830445C04Rik|Hemk2|Pred28	N-6 adenine-specific DNA methyltransferase 1 (putative)	protein-coding
unique_peak2-35184-9-13--0.617741515653384-0.459837087125828	chr16	52450778	52451533	+	0	NA	intron (NM_009655, intron 1 of 15)	intron (NM_009655, intron 1 of 15)	1955	NM_009655	11658	Mm.288282	NM_009655	ENSMUSG00000022636	Alcam	AI853494|BEN|CD166|DM-GRASP|MuSC|SC1	activated leukocyte cell adhesion molecule	protein-coding
common_peak1-12487-27-58--0.891097098466606-1.95552668877042	chr17	86962928	86963923	+	0	NA	intron (NM_011104, intron 11 of 14)	intron (NM_011104, intron 11 of 14)	-189779	NM_010137	13819	Mm.1415	NM_010137	ENSMUSG00000024140	Epas1	HIF-2alpha|HIF2A|HLF|HRF|MOP2|bHLHe73	endothelial PAS domain protein 1	protein-coding
common_peak1-11337-7-6--0.00826409175941478-0.97990265578305	chr15	86079537	86080059	+	0	NA	intron (NM_145476, intron 4 of 12)	L1M4c|LINE|L1	34909	NM_145476	223754	Mm.28904	NM_145476	ENSMUSG00000051864	Tbc1d22a	BC023106|D15Ertd781e	TBC1 domain family, member 22a	protein-coding
common_peak2-25052-7-8--0.370834171144123-1.00793137938329	chr18	32240367	32240714	+	0	NA	intron (NM_173441, intron 3 of 13)	Lx8|LINE|L1	13152	NM_173441	73473	Mm.66853	NM_173441	ENSMUSG00000024384	Iws1	1700069O15Rik|3000008H23|AL117927|AW214353	IWS1 homolog (S. cerevisiae)	protein-coding
common_peak1-12102-15-25--0.688274967585436-0.73354163167379	chr17	25832933	25833615	+	0	NA	Intergenic	Intergenic	-20843	NM_022422	64337	Mm.171123	NM_022422	ENSMUSG00000025739	Gng13	1500031D04Rik|AB030194|Ggamma13	guanine nucleotide binding protein (G protein), gamma 13	protein-coding
unique_peak1-3728-14-5-1.31425365963649-1.4372489031793	chr19	46509291	46509989	+	0	NA	intron (NM_001025391, intron 3 of 11)	intron (NM_001025391, intron 3 of 11)	38254	NM_015752	24069	Mm.41210	NM_015752	ENSMUSG00000025231	Sufu	Su(fu)	suppressor of fused homolog (Drosophila)	protein-coding
common_peak2-22958-9-10--0.269818212233077-1.05503135781948	chr14	52104354	52104895	+	0	NA	Intergenic	Intergenic	32987	NM_009486	22301	Mm.482572	NM_009486	ENSMUSG00000070448	Vmn2r89	V2r10|V2r11	vomeronasal 2, receptor 89	protein-coding
common_peak2-25542-7-8--0.370834171144123-1.00793137938329	chr19	6046070	6046524	+	0	NA	promoter-TSS (NM_001164709)	promoter-TSS (NM_001164709)	-279	NM_028769	74126	Mm.149870	NM_028769	ENSMUSG00000024807	Syvn1	1200010C09Rik|AW211966|C85322|D530017H19Rik|Hrd1	synovial apoptosis inhibitor 1, synoviolin	protein-coding
unique_peak2-39804-3-7--1.41398308995928-1.23214870625617	chrX	20869601	20870022	+	0	NA	Intergenic	RLTR14-int|LTR|ERV1	42042	NR_033482	629024	Mm.391230	NR_033482	ENSMUSG00000087586	Gm6938	EG629024	predicted gene 6938	ncRNA
unique_peak2-34967-8-6-0.197867495889966-1.03789460276074	chr15	98035086	98035533	+	0	NA	Intergenic	MTD|LTR|MaLR	-9336	NM_001011733	545140	Mm.432690	NM_001011733	ENSMUSG00000075427	Olfr288	C85333|GA_x5J8B7W76D0-7609197-7608973|MOR286-3P	olfactory receptor 288	protein-coding
unique_peak2-32473-2-15--2.91745425626332-3.28500101358144	chr1	33989239	33989795	+	0	NA	intron (NM_001276764, intron 2 of 102)	B2_Mm2|SINE|B2	24447	NM_001276764	13518	Mm.336625	NM_010081	ENSMUSG00000026131	Dst	2310001O04Rik|A830042E19Rik|AW554249|BP230|BPAG1-n|Bpag|Bpag1|Macf2|ah|athetoid|dt|mKIAA0728|nmf203|nmf339	dystonin	protein-coding
common_peak2-25331-21-27--0.237865656791368-0.339372226903478	chr18	76059362	76060137	+	0	NA	intron (NM_145356, intron 1 of 4)	intron (NM_145356, intron 1 of 4)	79917	NM_145356	207259	Mm.159332	NM_145356	ENSMUSG00000044646	Zbtb7c	B230208J24Rik|Kr-pok|Zbtb36	zinc finger and BTB domain containing 7C	protein-coding
unique_peak1-1281-9-1-2.18961340640422-2.31132995230379	chr11	118369355	118369883	+	0	NA	intron (NM_001285438, intron 4 of 13)	intron (NM_001285438, intron 4 of 13)	31345	NM_172573	217364	Mm.473963	NM_172573	ENSMUSG00000033857	Engase	C130099A03|D230014K01Rik	endo-beta-N-acetylglucosaminidase	protein-coding
common_peak2-20174-71-95-0.0594816779988152-0.328872436889812	chr1	171328708	171330205	+	0	NA	Intergenic	Intergenic	132139	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
unique_peak1-2246-9-3-1.18961340640422-1.57096726280955	chr15	77141452	77141961	+	0	NA	Intergenic	Intergenic	-4223	NM_053104	93686	Mm.202774	NM_053104	ENSMUSG00000033565	Rbfox2	Fbm2|Fxh|Hrnbp2|Rbm9	RNA binding protein, fox-1 homolog (C. elegans) 2	protein-coding
common_peak1-17893-8-15--0.994777582052429-0.771068449301683	chr7	119739861	119740246	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	-82781	NM_001166584	21676	Mm.24685	NM_009346	ENSMUSG00000055320	Tead1	2610024B07Rik|B230114H05Rik|Gtrgeo5|TEAD-1|TEF-1|Tcf13|mTEF-1	TEA domain family member 1	protein-coding
unique_peak2-39010-6-10--0.894033508256995-1.21398586181642	chr8	47935332	47935824	+	0	NA	Intergenic	Intergenic	110479	NM_008391	16363	Mm.1149	NM_008391	ENSMUSG00000031627	Irf2	9830146E22Rik|AI646973|Irf-2	interferon regulatory factor 2	protein-coding
common_peak1-8688-108-131-0.325782842049616-1.15095276495618	chr11	48870686	48873928	+	0	NA	exon (NM_001145164, exon 2 of 2).2	exon (NM_001145164, exon 2 of 2).2	5407	NM_001145164	100039796	Mm.482363	NM_001145164	ENSMUSG00000078921	Tgtp2	OTTMUSG00000005537	T cell specific GTPase 2	protein-coding
common_peak2-25949-14-7-0.899216160357645-0.947446088118041	chr19	47507411	47507822	+	0	NA	intron (NM_001164717, intron 1 of 13)	G-rich|Low_complexity|Low_complexity	31285	NM_001164717	14218	Mm.127560	NM_008018	ENSMUSG00000053617	Sh3pxd2a	2310014D11Rik|AA589508|AI256723|AI413738|C230050L11|EG329070|Fish|Gm5098|Sh3md1|TSK5|Tks5	SH3 and PX domains 2A	protein-coding
unique_peak2-34738-7-6--0.00826409175941478-0.97990265578305	chr15	41695031	41695420	+	0	NA	Intergenic	Intergenic	6041	NM_175456	223513	Mm.148913	NM_175456	ENSMUSG00000042895	Abra	C130068O12Rik|STARS	actin-binding Rho activating protein	protein-coding
common_peak1-18638-30-70--0.980071710012809-2.7115406466007	chr8	111145023	111146199	+	0	NA	Intergenic	Intergenic	-37034	NR_077224	109215	Mm.65282	NR_077224		3010033K07Rik	-	RIKEN cDNA 3010033K07 gene	ncRNA
common_peak1-13868-68-47-0.98499827857714-3.89468630297453	chr2	70661375	70662667	+	0	NA	intron (NM_172664, intron 1 of 19)	intron (NM_172664, intron 1 of 19)	1516	NM_172664	228012	Mm.136511	NM_172664	ENSMUSG00000041997	Tlk1	4930545J15Rik	tousled-like kinase 1	protein-coding
unique_peak1-3220-13-4-1.45654393575041-2.23384849113406	chr18	60502724	60503445	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-32599	NM_021792	60440	Mm.261140	NM_021792	ENSMUSG00000054072	Iigp1	2900074L10Rik|AI046432|AW111922|Ifgga1|Iigp|Irga6	interferon inducible GTPase 1	protein-coding
common_peak2-28085-7-6--0.00826409175941478-0.97990265578305	chr4	83342316	83342586	+	0	NA	intron (NM_001081012, intron 21 of 25)	intron (NM_001081012, intron 21 of 25)	171002	NM_001081012	320226	Mm.180032	NM_029117	ENSMUSG00000052407	Ccdc171	4930418J05Rik|4930473A06Rik|A330015D16Rik	coiled-coil domain containing 171	protein-coding
unique_peak2-35745-7-6--0.00826409175941478-0.97990265578305	chr18	37714855	37715244	+	0	NA	intron (NM_001301259, intron 1 of 3)	IAP-d-int|LTR|ERVK	37042	NM_053147	93893	Mm.348054	NM_053147	ENSMUSG00000073591	Pcdhb22	Pcdhb15|PcdhbV	protocadherin beta 22	protein-coding
unique_peak1-6593-10-4-1.03448725012141-1.5150158574804	chr7	144744379	144744875	+	0	NA	Intergenic	RLTR21|LTR|ERVK	115270	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
common_peak2-23311-236-401-0.0784460771924973-0.440285480772196	chr15	36792224	36794984	+	0	NA	Intergenic	MLT1J|LTR|MaLR	-66920	NM_001253806	22631	Mm.3360	NM_011740	ENSMUSG00000022285	Ywhaz	1110013I11Rik|14-3-3zeta|AI596267|AL022924|AU020854	tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta polypeptide	protein-coding
common_peak2-23662-30-10-1.71024379085458-3.68843956647704	chr15	85423635	85424158	+	0	NA	non-coding (NR_040433, exon 5 of 5)	non-coding (NR_040433, exon 5 of 5)	-11645	NM_009528	22422	Mm.306946	NM_009528	ENSMUSG00000022382	Wnt7b	Wnt-7b	wingless-type MMTV integration site family, member 7B	protein-coding
unique_peak1-4216-8-4-0.683294323060208-1.21878474469819	chr2	120131348	120131799	+	0	NA	intron (NM_001024145, intron 11 of 19)	Lx6|LINE|L1	8328	NM_001024145	271844	Mm.24880	NM_001024145	ENSMUSG00000046971	Pla2g4f	4732472I07Rik|Gm647|Pla2zeta	phospholipase A2, group IVF	protein-coding
common_peak1-12523-8-5-0.420259917226415-1.10484139239135	chr18	57818870	57819443	+	0	NA	intron (NM_029290, intron 5 of 6)	intron (NM_029290, intron 5 of 6)	-20917	NR_045360	70157	Mm.490532	NR_045360		2210409D07Rik	-	RIKEN cDNA 2210409D07 gene	ncRNA
common_peak2-30631-7-6--0.00826409175941478-0.97990265578305	chr7	97341283	97341788	+	0	NA	intron (NM_001252524, intron 16 of 18)	intron (NM_001252524, intron 16 of 18)	62793	NM_001252520	233489	Mm.235175	NM_146194	ENSMUSG00000039361	Picalm	CALM|CLTH|PAP180|fit-1|fit1|mKIAA4114	phosphatidylinositol binding clathrin assembly protein	protein-coding
common_peak1-11810-27-9-1.66961785600787-3.27210358356897	chr16	62853897	62854868	+	0	NA	intron (NM_011173, intron 1 of 14)	intron (NM_011173, intron 1 of 14)	222	NM_011173	19128	Mm.127156	NM_011173	ENSMUSG00000022912	Pros1	AW214361	protein S (alpha)	protein-coding
common_peak2-24727-11-14--0.398197011356905-0.379391706698377	chr17	47383563	47384118	+	0	NA	intron (NM_172622, intron 1 of 16)	intron (NM_172622, intron 1 of 16)	16661	NM_172622	224829	Mm.260989	NM_172622	ENSMUSG00000064043	Trerf1	9430096I18Rik|AI429294|B830015H24|RAPA|Trep-132|Trep132	transcriptional regulating factor 1	protein-coding
unique_peak2-39603-4-5--0.608423014574403-0.909929411522249	chr9	78299165	78299594	+	0	NA	intron (NM_026658, intron 3 of 11)	RSINE1|SINE|B4	3362	NM_026658	68291	Mm.291779	NM_026658	ENSMUSG00000032342	Mto1	2310039H01Rik|5730419A02Rik	mitochondrial translation optimization 1 homolog (S. cerevisiae)	protein-coding
common_peak1-12224-10-10--0.103016273628528-0.301029995663987	chr17	34944593	34945100	+	0	NA	Intergenic	Intergenic	-3475	NM_009995	13079	Mm.440407	NM_009995	ENSMUSG00000024365	Cyp21a1	21-OH|21OH|21OHA|21OHB|CYP21OH-A|Cyp21|Cyp21-ps1|Cyp21B|Cyp21a2-ps|Cyp21a2ps|Oh21-1|Oh21-2	cytochrome P450, family 21, subfamily a, polypeptide 1	protein-coding
unique_peak1-2304-29-7-2.11229008061511-4.7258874491988	chr15	81101360	81102496	+	0	NA	Intergenic	ID_B1|SINE|B4	-19636	NR_077230	78102	Mm.296832	NR_077229		8430426J06Rik	-	RIKEN cDNA 8430426J06 gene	ncRNA
unique_peak2-38810-6-7--0.434601889619698-0.97990265578305	chr7	134107420	134107957	+	0	NA	intron (NM_001252566, intron 12 of 16)	intron (NM_001252566, intron 12 of 16)	-11740	NM_026638	52858	Mm.28219	NM_026638	ENSMUSG00000030682	Cdipt	9530042F15Rik|D7Bwg0575e|Pis|Pis1	CDP-diacylglycerol--inositol 3-phosphatidyltransferase (phosphatidylinositol synthase)	protein-coding
common_peak1-16974-10-3-1.35641534500877-1.75805390616669	chr6	86578551	86579030	+	0	NA	exon (NM_026414, exon 1 of 1)	exon (NM_026414, exon 1 of 1)	622	NM_026414	67855	Mm.183043	NM_026414	ENSMUSG00000033508	Asprv1	2300003P22Rik|AA986851|SASP|SASPase|Taps	aspartic peptidase, retroviral-like 1	protein-coding
common_peak2-29200-14-6-1.09186123830004-1.16633110333236	chr5	136533864	136534365	+	0	NA	intron (NM_027158, intron 1 of 5)	B1_Mur2|SINE|Alu	977	NM_027158	69665	Mm.75713	NM_027158	ENSMUSG00000006143	Upk3bl	2310043J07Rik	uroplakin 3B-like	protein-coding
common_peak1-11965-7-10--0.660340788339108-1.12966497611638	chr17	6780060	6780485	+	0	NA	Intergenic	Intergenic	-26116	NM_001166627	100040531	Mm.457987	NM_001166627	ENSMUSG00000095677	Dynlt1f	100040631|Dynlt1e	dynein light chain Tctex-type 1F	protein-coding
unique_peak1-543-9-8-0.0196884049619079-1.03275496310833	chr1	191312685	191313196	+	0	NA	Intergenic	Intergenic	-86788	NM_001281848	16526	Mm.33304	NM_010607	ENSMUSG00000037624	Kcnk2	A430027H14Rik|AI848635|TREK-1	potassium channel, subfamily K, member 2	protein-coding
common_peak1-16910-46-48-0.283286099133593-0.591158351830189	chr6	72548924	72550629	+	0	NA	intron (NM_026159, intron 1 of 10)	B1F|SINE|Alu	1154	NM_026159	67442	Mm.305108	NM_026159	ENSMUSG00000056666	Retsat	0610039N19Rik|C80029|MMT-7|Ppsig	retinol saturase (all trans retinol 13,14 reductase)	protein-coding
common_peak2-32118-6-4-0.24347001549294-0.989110657569874	chr9	102777541	102777838	+	0	NA	intron (NM_001284258, intron 4 of 13)	MER3|DNA|MER1_type	40439	NM_001042607	20187	Mm.335391	NM_013649	ENSMUSG00000032547	Ryk	AW536699|ERK-3|Vik	receptor-like tyrosine kinase	protein-coding
common_peak2-26086-15-17--0.157760250886656-0.307611222530528	chr2	153435674	153436616	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	22372	NM_001195390	99311	Mm.294478	NM_133850	ENSMUSG00000056941	Commd7	2310010I22Rik|AW060956|mU3	COMM domain containing 7	protein-coding
unique_peak2-37556-3-6--1.22133801201688-1.08602067057793	chr5	31750627	31750956	+	0	NA	Intergenic	Intergenic	-4018	NM_172993	269639	Mm.259127	NM_172993	ENSMUSG00000062761	Zfp512	2500002M11Rik|AI450173|D230008H22|Znf512	zinc finger protein 512	protein-coding
unique_peak1-4485-9-3-1.18961340640422-1.57096726280955	chr3	88030814	88031355	+	0	NA	Intergenic	Intergenic	11564	NR_029817	387133		NR_029817		Mir9-1	Mirn9|Mirn9-1|mmu-mir-9-1	microRNA 9-1	ncRNA
common_peak1-9910-9-17--0.980311595038092-0.844317084070804	chr12	87266450	87266994	+	0	NA	exon (NM_001081423, exon 23 of 34)	exon (NM_001081423, exon 23 of 34)	100822	NM_001081423	320244	Mm.132172	NM_177114	ENSMUSG00000012609	Ttll5	1700048H13Rik|2310009M18Rik|4930556H18Rik|AI428864|D630041K24Rik|R75373|Stamp|mKIAA0998	tubulin tyrosine ligase-like family, member 5	protein-coding
common_peak2-24877-15-17--0.157760250886656-0.307611222530528	chr17	83222554	83223222	+	0	NA	Intergenic	Intergenic	254677	NR_045094	100503434	Mm.187281	NR_045094		Gm19689	-	predicted gene, 19689	ncRNA
common_peak2-21789-31-11-1.64027617009197-3.52967372072617	chr11	117949389	117950011	+	0	NA	intron (NM_001167746, intron 34 of 80)	intron (NM_001167746, intron 34 of 80)	40833	NM_001167746	69926	Mm.473893	NM_001167746	ENSMUSG00000033987	Dnah17	2810003K23Rik|Dnahc17|Dnahcl1|Gm1178|mKIAA3028	dynein, axonemal, heavy chain 17	protein-coding
unique_peak1-4851-8-0-3.00522241794757-2.70926996097583	chr3	158387261	158387813	+	0	NA	Intergenic	Lx2|LINE|L1	-162352	NM_001081358	242274	Mm.132162	NM_001081358	ENSMUSG00000028176	Lrrc7	AK122498|densin|mKIAA1365	leucine rich repeat containing 7	protein-coding
common_peak1-17140-22-31--0.352715894912595-0.440892966163086	chr6	116338002	116338586	+	0	NA	intron (NM_027920, intron 2 of 6)	B3|SINE|B2	50153	NM_027920	71779	Mm.27064	NM_027920	ENSMUSG00000025702	March8	1300017E09Rik|Mir	membrane-associated ring finger (C3HC4) 8	protein-coding
common_peak1-12954-19-17-0.232762325219374-0.392630012299441	chr19	53460811	53461619	+	0	NA	intron (NM_172429, intron 2 of 5)	intron (NM_172429, intron 2 of 5)	3848	NM_172429	76479	Mm.313687	NM_172429	ENSMUSG00000025024	Smndc1	2410004J23Rik|4933440I19Rik	survival motor neuron domain containing 1	protein-coding
common_peak1-10894-61-72-0.192924770869323-0.470687517451348	chr15	95828606	95830725	+	0	NA	Intergenic	MT2A|LTR|ERVL	80318	NR_003627	402773	Mm.210567	NM_001033483		D030018L15Rik	-	nuclear receptor coactivator 2 pseudogene	pseudo
unique_peak1-4158-12-2-2.06381348436648-2.79529063155376	chr2	102829327	102829617	+	0	NA	Intergenic	ORR1C1|LTR|MaLR	84198	NM_175094	27402	Mm.315011	NM_175094	ENSMUSG00000010914	Pdhx	AI481367|E3bp|Pdx1	pyruvate dehydrogenase complex, component X	protein-coding
common_peak1-17031-12-6-0.841421063030034-1.58711810488664	chr6	91694705	91695416	+	0	NA	intron (NM_009320, intron 10 of 14)	intron (NM_009320, intron 10 of 14)	60999	NM_009320	21366	Mm.395650	NM_009320	ENSMUSG00000030096	Slc6a6	AA589629|C80501|Taut	solute carrier family 6 (neurotransmitter transporter, taurine), member 6	protein-coding
common_peak2-30106-24-12-1.09277018462662-1.73042999925837	chr6	135292614	135293218	+	0	NA	Intergenic	B3|SINE|B2	-20033	NM_010128	13730	Mm.182785	NM_010128	ENSMUSG00000030208	Emp1	I-8-09|TMP	epithelial membrane protein 1	protein-coding
common_peak2-19839-24-44--0.698643193561958-1.07959258339368	chr1	90998196	90999410	+	0	NA	intron (NM_133816, intron 1 of 5)	RLTRETN_Mm|LTR|ERVK	31766	NM_133816	98402	Mm.170983	NM_133816		Sh3bp4	AI594717|AW227605|BOG25	SH3-domain binding protein 4	protein-coding
unique_peak2-37645-6-8--0.60452689106201-1.03789460276074	chr5	89370593	89371072	+	0	NA	intron (NM_001197147, intron 2 of 25)	intron (NM_001197147, intron 2 of 25)	54547	NM_018760	54403	Mm.41044	NM_018760	ENSMUSG00000060961	Slc4a4	AI835705|NBC|NBC1	solute carrier family 4 (anion exchanger), member 4	protein-coding
unique_peak1-1344-13-1-2.77847203063777-3.64038867156802	chr12	16839742	16840220	+	0	NA	Intergenic	B2_Mm2|SINE|B2	22210	NM_033270	50496	Mm.23296	NM_033270	ENSMUSG00000057469	E2f6	AI462434|E2F6b|EMA	E2F transcription factor 6	protein-coding
unique_peak2-33431-4-12--1.72390023199434-1.85743853830261	chr11	60728410	60728832	+	0	NA	Intergenic	Intergenic	-1327	NM_025294	24083	Mm.22780	NM_025294	ENSMUSG00000018931	Natd1	AI256713|F3-2|Gm16515|Gtlf3b	N-acetyltransferase domain containing 1	protein-coding
common_peak2-28822-96-149--0.0627674761405519-0.31955881660111	chr5	65762913	65764779	+	0	NA	intron (NM_031180, intron 2 of 4)	B3A|SINE|B2	18824	NM_011292	20005	Mm.300271	NM_011292	ENSMUSG00000047215	Rpl9	-	ribosomal protein L9	protein-coding
common_peak2-31831-11-12--0.191746133889479-0.310474156842889	chr9	44552375	44552887	+	0	NA	intron (NM_145985, intron 9 of 9)	intron (NM_145985, intron 9 of 9)	-9350	NM_153537	102693	Mm.28639	NM_153537	ENSMUSG00000048537	Phldb1	AU041016|D330037A14Rik|Ll5a	pleckstrin homology-like domain, family B, member 1	protein-coding
unique_peak2-32783-6-6--0.241956811677302-0.947717972411649	chr1	179574149	179574563	+	0	NA	Intergenic	Intergenic	-1282	NR_037994	75589	Mm.86666	NR_037994		2310043L19Rik	-	RIKEN cDNA 2310043L19 gene	ncRNA
common_peak2-30017-13-10-0.319040412000471-0.446472590016315	chr6	125099408	125099875	+	0	NA	exon (NM_001039669, exon 2 of 10)	exon (NM_001039669, exon 2 of 10)	4372	NM_001039669	320678	Mm.129415	NM_178787	ENSMUSG00000038271	Iffo1	4733401N06Rik|A930037G23Rik|HOM-TES-103|Iffo	intermediate filament family orphan 1	protein-coding
common_peak2-19940-7-5-0.214128329577033-1.01466476204226	chr1	128400908	128401319	+	0	NA	intron (NM_001081756, intron 3 of 16)	intron (NM_001081756, intron 3 of 16)	-11609	NM_172484	210356	Mm.377234	NM_172484	ENSMUSG00000049690	Nckap5	8430408F21|D130011D22Rik|E030049G20Rik|Erih1|Erih2|Gm1548|Nap5	NCK-associated protein 5	protein-coding
common_peak2-26083-57-95--0.318929460642227-0.710824722492017	chr2	147012426	147014428	+	0	NA	intron (NR_108091, intron 1 of 2)	intron (NR_108091, intron 1 of 2)	267	NR_108091	78068	Mm.261511	NR_108091	ENSMUSG00000053545	6430503K07Rik	-	RIKEN cDNA 6430503K07 gene	ncRNA
unique_peak2-34741-7-13--1.00826409175941-0.697979855752659	chr15	51877528	51877978	+	0	NA	TTS (NM_175503)	TTS (NM_175503)	6100	NM_175503	239435	Mm.24204	NM_175503	ENSMUSG00000068522	Aard	A5D3|AV328152	alanine and arginine rich domain containing protein	protein-coding
common_peak2-30265-13-13--0.0288828914198356-0.309074325783021	chr7	16047131	16047534	+	0	NA	Intergenic	L1Md_A|LINE|L1	73132	NM_145708	246792	Mm.26391	NM_145708	ENSMUSG00000074369	Obox2	-	oocyte specific homeobox 2	protein-coding
common_peak2-21569-21-31--0.430510734733764-0.49501414494053	chr11	97449355	97450069	+	0	NA	Intergenic	Lx9|LINE|L1	-10113	NR_045496	69729	Mm.233452	NR_045496	ENSMUSG00000085860	2410003L11Rik	-	RIKEN cDNA 2410003L11 gene	ncRNA
common_peak1-11188-19-16-0.315224485411347-0.448200956659575	chr15	76973815	76974497	+	0	NA	intron (NM_001110827, intron 2 of 13)	intron (NM_001110827, intron 2 of 13)	10086	NM_001110830	93686	Mm.202774	NM_053104	ENSMUSG00000033565	Rbfox2	Fbm2|Fxh|Hrnbp2|Rbm9	RNA binding protein, fox-1 homolog (C. elegans) 2	protein-coding
unique_peak1-2640-9-3-1.18961340640422-1.57096726280955	chr16	45039038	45039497	+	0	NA	Intergenic	MIR|SINE|MIR	-54899	NM_026439	67896	Mm.181074	NM_026439	ENSMUSG00000022665	Ccdc80	2610001E17Rik|DRO1|Ssg1|Urb	coiled-coil domain containing 80	protein-coding
common_peak1-15764-10-8-0.186490343566457-1.078512453669	chr4	151861045	151861525	+	0	NA	intron (NM_153424, intron 2 of 29)	intron (NM_153424, intron 2 of 29)	9034	NM_153424	260305	Mm.302496	NM_153424	ENSMUSG00000039577	Nphp4	4930564O18Rik|nmf192	nephronophthisis 4 (juvenile) homolog (human)	protein-coding
unique_peak1-3949-15-8-0.842239749113344-0.891319708951327	chr2	29712974	29713723	+	0	NA	Intergenic	Intergenic	-11666	NM_207298	99151	Mm.296336	NM_207298	ENSMUSG00000039787	Cercam	2600006K01Rik|AL024097|Ceecam1	cerebral endothelial cell adhesion molecule	protein-coding
common_peak1-7839-28-29-0.146068524212944-0.357106932979091	chr1	130735012	130736090	+	0	NA	Intergenic	B4A|SINE|B4	-246675	NM_009911	12767	Mm.1401	NM_009911	ENSMUSG00000045382	Cxcr4	CD184|Cmkar4|LESTR|PB-CKR|PBSF/SDF-1|Sdf1r|b2b220Clo	chemokine (C-X-C motif) receptor 4	protein-coding
common_peak1-12150-9-34--1.93966961054075-3.66464198368355	chr17	28232821	28233345	+	0	NA	Intergenic	polypurine|Low_complexity|Low_complexity	-15499	NM_001085555	21463	Mm.29758	NM_013687	ENSMUSG00000062859	Tcp11	D17Ken1|Tcp-11	t-complex protein 11	protein-coding
common_peak1-11902-12-14--0.25811461052088-0.309074325783021	chr17	22314592	22315256	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-11980	NM_177596	210853	Mm.441622	NM_177596	ENSMUSG00000063383	Zfp947	6720451E15|EG210853|Gm4769	zinc finger protein 947	protein-coding
unique_peak1-5832-8-2-1.42025991722641-1.65811743852845	chr6	72374487	72375061	+	0	NA	intron (NM_019802, intron 6 of 14)	B2_Mm2|SINE|B2	10472	NM_019802	56316	Mm.19937	NM_019802	ENSMUSG00000053460	Ggcx	-	gamma-glutamyl carboxylase	protein-coding
unique_peak2-32884-3-7--1.41398308995928-1.23214870625617	chr10	12788935	12789344	+	0	NA	Intergenic	Lx4B|LINE|L1	-21455	NM_009538	22634	Mm.287857	NM_009538	ENSMUSG00000019817	Plagl1	Lot1|Zac1	pleiomorphic adenoma gene-like 1	protein-coding
common_peak2-30623-16-21--0.341167976369236-0.392630012299441	chr7	92637061	92637843	+	0	NA	Intergenic	ETnERV2-int|LTR|ERVK	-73266	NM_001105182	330581	Mm.469909	NM_001105182	ENSMUSG00000091006	Vmn2r69	-	vomeronasal 2, receptor 69	protein-coding
common_peak1-13881-38-41-0.17913523651977-0.420706537898431	chr2	73891901	73892853	+	0	NA	Intergenic	Intergenic	-143026	NM_175015	228033	Mm.2966	NM_175015	ENSMUSG00000018770	Atp5g3	6030447M23	ATP synthase, H+ transporting, mitochondrial F0 complex, subunit C3 (subunit 9)	protein-coding
unique_peak1-6529-9-4-0.867685311516858-1.36011389749466	chr7	122563258	122563779	+	0	NA	Intergenic	Intergenic	381605	NM_001277328	20679	Mm.323365	NM_011445	ENSMUSG00000051910	Sox6	AI987981|SOX-LZ	SRY (sex determining region Y)-box 6	protein-coding
common_peak1-15420-11-14--0.398197011356905-0.379391706698377	chr4	88802598	88803186	+	0	NA	intron (NM_024433, intron 4 of 7)	L1MA9|LINE|L1	19618	NM_024433	66902	Mm.28500	NM_024433	ENSMUSG00000062937	Mtap	1300019I21Rik|MSAP	methylthioadenosine phosphorylase	protein-coding
common_peak2-23566-7-7--0.200909169701811-0.97990265578305	chr15	79377670	79378063	+	0	NA	promoter-TSS (NM_199079)	promoter-TSS (NM_199079)	-695	NM_199080	67040	Mm.29644	NM_152806	ENSMUSG00000055065	Ddx17	2610007K22Rik|A430025E01Rik|AI047725|C80929|Gm926|p72	DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	protein-coding
common_peak2-26351-35-53--0.323517243700964-0.527635886371667	chr2	37422191	37423107	+	0	NA	TTS (NM_146121)	TTS (NM_146121)	50503	NM_177383	338346	Mm.445325	NM_177383		Gpr21	C230004C13Rik	G protein-coupled receptor 21	protein-coding
common_peak1-10477-23-25-0.0213277863679888-0.30528805757448	chr13	113603026	113603950	+	0	NA	intron (NM_008903, intron 1 of 5)	intron (NM_008903, intron 1 of 5)	12503	NM_008247	19012	Mm.317186	NM_008247	ENSMUSG00000021759	Ppap2a	Hic53|Hpic53|LPP-1|LPP1|PAP-2a|PAP2-alpha|PAP2a|mPAP	phosphatidic acid phosphatase type 2A	protein-coding
unique_peak1-4669-11-4-1.18676548936425-1.68134727924692	chr3	93506971	93507657	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-27109	NM_148949	207213	Mm.425165	NM_148949	ENSMUSG00000094084	Tdpoz1	2cpoz56|Mapp2|Spopl1	TD and POZ domain containing 1	protein-coding
unique_peak1-2244-15-4-1.69023665566829-1.97518968347063	chr15	76783039	76783930	+	0	NA	Intergenic	Intergenic	4510	NM_054099	117171	Mm.322968	NM_054099		1110038F14Rik	-	RIKEN cDNA 1110038F14 gene	protein-coding
common_peak1-15565-11-9-0.186765489364251-0.344532117358383	chr4	126110310	126110805	+	0	NA	Intergenic	Intergenic	-3771	NM_153402	214150	Mm.440915	NM_153402		Ago3	AW048688|C130014L07Rik|Eif2c3	argonaute RISC catalytic subunit 3	protein-coding
common_peak2-21349-23-33--0.365695336741259-0.481798116163913	chr11	77763092	77764208	+	0	NA	intron (NM_001291225, intron 1 of 15)	intron (NM_001291225, intron 1 of 15)	19309	NM_021286	20370	Mm.229330	NM_021286	ENSMUSG00000000632	Sez6	BSRP-C|D11Bhm177e|sez-6	seizure related gene 6	protein-coding
unique_peak1-5479-10-1-2.35641534500877-2.57096726280955	chr5	130063800	130064247	+	0	NA	intron (NM_172276, intron 14 of 17)	intron (NM_172276, intron 14 of 17)	-26066	NM_011846	23948	Mm.42047	NM_011846	ENSMUSG00000029436	Mmp17	MT4-MMP|MT4MMP|MTMMP4	matrix metallopeptidase 17	protein-coding
common_peak2-30047-14-17--0.270708841084668-0.328191099940267	chr6	127358730	127359353	+	0	NA	Intergenic	Intergenic	-44700	NM_181402	101187	Mm.110818	NM_181402	ENSMUSG00000037997	Parp11	5330431N24Rik|AI851877|ARTD11|HIN1L	poly (ADP-ribose) polymerase family, member 11	protein-coding
common_peak1-10511-36-28-0.621340091040183-1.16863888781394	chr14	7807839	7809056	+	0	NA	Intergenic	RLTR45-int|LTR|ERVK	51516	NM_001164727	100038847	Mm.443041	NM_001164727	ENSMUSG00000093985	Gm10406	ENSMUSG00000072735	predicted gene 10406	protein-coding
common_peak2-25714-50-65--0.00345380287950103-0.302687624289356	chr19	21653058	21654107	+	0	NA	Intergenic	RMER1A|Other|Other	73699	NM_025423	66206	Mm.272430	NM_025423	ENSMUSG00000035171	1110059E24Rik	-	RIKEN cDNA 1110059E24 gene	protein-coding
common_peak2-26667-17-39--1.10363175668232-1.82978420966174	chr2	122028655	122029545	+	0	NA	intron (NM_028914, intron 6 of 6)	intron (NM_028914, intron 6 of 6)	17092	NM_028914	74401	Mm.374834	NM_028914	ENSMUSG00000027229	4933406J08Rik	-	RIKEN cDNA 4933406J08 gene	protein-coding
common_peak2-19815-15-15-0.0121647505556561-0.30803596071496	chr1	88463725	88464320	+	0	NA	intron (NM_008801, intron 1 of 4)	intron (NM_008801, intron 1 of 4)	15054	NM_008801	18582	Mm.12925	NM_008801	ENSMUSG00000026239	Pde6d	AI841218|PrBP/delta	phosphodiesterase 6D, cGMP-specific, rod, delta	protein-coding
common_peak2-24889-3-6--1.22133801201688-1.08602067057793	chr17	84026427	84026737	+	0	NA	intron (NM_153512, intron 1 of 1)	intron (NM_153512, intron 1 of 1)	4653	NM_153512	225030	Mm.223506	NM_153512	ENSMUSG00000045053	Kcng3	KV6.3|Kv10.1a|Kv10.1b	potassium voltage-gated channel, subfamily G, member 3	protein-coding
unique_peak1-7306-6-0-2.5653981103803-2.10720996964787	chr9	117021419	117021901	+	0	NA	intron (NM_001172122, intron 1 of 13)	intron (NM_001172122, intron 1 of 13)	139941	NM_001172123	207181	Mm.326411	NM_178660	ENSMUSG00000039607	Rbms3	6720477E09Rik|8430436O14Rik	RNA binding motif, single stranded interacting protein	protein-coding
common_peak1-13666-19-18-0.154759813218101-0.351190433797598	chr2	27514921	27515725	+	0	NA	Intergenic	Intergenic	-17398	NM_011305	20181	Mm.24624	NM_011305	ENSMUSG00000015846	Rxra	9530071D11Rik|Nr2b1|RXRalpha1	retinoid X receptor alpha	protein-coding
common_peak2-19532-17-7-1.21829633820504-1.55050753388977	chr1	75546300	75546785	+	0	NA	intron (NM_009208, intron 6 of 22)	intron (NM_009208, intron 6 of 22)	3701	NM_009208	20536	Mm.5053	NM_009208		Slc4a3	A930038D23Rik|Ae3	solute carrier family 4 (anion exchanger), member 3	protein-coding
common_peak2-31802-10-11--0.228547155712387-0.31137425193576	chr9	36767306	36767629	+	0	NA	intron (NM_148950, intron 3 of 11)	intron (NM_148950, intron 3 of 11)	116223	NM_183171	235180	Mm.5264	NM_183171	ENSMUSG00000032118	Fez1	UNC-76|UNC76	fasciculation and elongation protein zeta 1 (zygin I)	protein-coding
common_peak1-18463-14-25--0.801223557783447-0.84969927174089	chr8	84237290	84237882	+	0	NA	intron (NM_001297596, intron 2 of 24)	Lx9|LINE|L1	371125	NM_001297593	234515	Mm.324468	NM_001024617	ENSMUSG00000037940	Inpp4b	E130107I17Rik	inositol polyphosphate-4-phosphatase, type II	protein-coding
unique_peak2-35969-9-10--0.269818212233077-1.05503135781948	chr19	18766657	18766989	+	0	NA	intron (NM_026120, intron 5 of 7)	intron (NM_026120, intron 5 of 7)	-20903	NM_177640	225995	Mm.28101	NM_177640	ENSMUSG00000047044	D030056L22Rik	-	RIKEN cDNA D030056L22 gene	protein-coding
unique_peak1-3918-45-10-2.40092640670757-8.43928726344098	chr2	25110339	25112143	+	0	NA	promoter-TSS (NM_001252542)	promoter-TSS (NM_001252542)	282	NM_177344	227615	Mm.213925	NM_177344	ENSMUSG00000078201	Tmem203	C730025P13Rik|Hbebp1	transmembrane protein 203	protein-coding
common_peak1-16876-19-22--0.120874629395327-0.306080386793804	chr6	67036628	67037549	+	0	NA	Intergenic	B3|SINE|B2	-49687	NM_007836	13197	Mm.72235	NM_007836	ENSMUSG00000036390	Gadd45a	AA545191|Ddit1|GADD45	growth arrest and DNA-damage-inducible 45 alpha	protein-coding
unique_peak2-37393-1-5--2.2120195109379-1.32905871926422	chr4	141273556	141273967	+	0	NA	intron (NM_001017966, intron 1 of 9)	MTEa|LTR|MaLR	5573	NM_001017966	68817	Mm.393721	NM_001017966		Ddi2	1110056G13Rik|1700027M01Rik|9130022E05Rik|AI604911|AU040698	DNA-damage inducible protein 2	protein-coding
common_peak1-7819-23-8-1.55184250306677-2.47979361197949	chr1	125686148	125687260	+	0	NA	intron (NM_199021, intron 3 of 25)	GA-rich|Low_complexity|Low_complexity	255432	NM_199021	269109	Mm.483255	NM_199021	ENSMUSG00000036815	Dpp10	6430601K09Rik|DPP X|Dprp3	dipeptidylpeptidase 10	protein-coding
common_peak2-28104-10-7-0.356415345008769-1.12966497611638	chr4	88934091	88934512	+	0	NA	intron (NM_009877, intron 1 of 2)	intron (NM_009877, intron 1 of 2)	-6205	NM_001040654	12578	Mm.4733	NM_009877	ENSMUSG00000044303	Cdkn2a	ARF-INK4a|Arf|INK4a-ARF|Ink4a/Arf|MTS1|Pctr1|p16|p16(INK4a)|p16INK4a|p19<ARF>|p19ARF	cyclin-dependent kinase inhibitor 2A	protein-coding
common_peak2-31032-22-23-0.0623216043662485-0.319130838712456	chr8	13594634	13595578	+	0	NA	intron (NM_009025, intron 7 of 23)	intron (NM_009025, intron 7 of 23)	-32645	NM_001080781	66501	Mm.46136	NM_025601	ENSMUSG00000031452	1700029H14Rik	-	RIKEN cDNA 1700029H14 gene	protein-coding
common_peak2-28491-11-18--0.739233929191972-0.671582559449692	chr4	155847397	155848087	+	0	NA	Intergenic	Intergenic	-238776	NM_198305	231003	Mm.423038	NM_198305	ENSMUSG00000078484	Klhl17	AL022703|BC058738	kelch-like 17	protein-coding
common_peak1-13738-22-17-0.477359103645092-0.633951497070961	chr2	32452058	32452844	+	0	NA	intron (NM_011373, intron 4 of 4)	intron (NM_011373, intron 4 of 4)	-2778	NM_001025311	50935	Mm.88831	NM_016973	ENSMUSG00000026811	St6galnac6	ST6GalNAcVI|Siat7f	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6	protein-coding
unique_peak1-1717-9-8-0.0196884049619079-1.03275496310833	chr13	95414372	95414924	+	0	NA	Intergenic	Intergenic	-144250	NM_009321	21371	Mm.379025	NM_009321	ENSMUSG00000042043	Tbca	Tbca13	tubulin cofactor A	protein-coding
common_peak2-29889-96-78-0.862270466178225-4.62690657659952	chr6	113037777	113039601	+	0	NA	intron (NM_028385, intron 1 of 21)	L1Md_F2|LINE|L1	11056	NM_028385	72895	Mm.367159	NM_028385	ENSMUSG00000034269	Setd5	2900045N06Rik|C330007C20|C85544|mKIAA1757	SET domain containing 5	protein-coding
common_peak1-10535-14-15--0.100783839642355-0.301029995663982	chr14	14633490	14634146	+	0	NA	Intergenic	Intergenic	130428	NM_177624	218739	Mm.39919	NM_177624	ENSMUSG00000044772	Sntn	A430083B19Rik	sentan, cilia apical structure protein	protein-coding
unique_peak1-3518-8-1-2.00522241794757-2.05605744720049	chr19	17251395	17251860	+	0	NA	intron (NM_181348, intron 10 of 19)	intron (NM_181348, intron 10 of 19)	162368	NM_001136484	14537	Mm.244825	NM_010265	ENSMUSG00000038843	Gcnt1	5630400D21Rik|B130048E03|C2 GlcNAcT|C2GNT|IGnT	glucosaminyl (N-acetyl) transferase 1, core 2	protein-coding
common_peak1-11411-54-128--0.83814149379352-3.75184585364249	chr15	99029447	99031169	+	0	NA	intron (NM_139140, intron 9 of 12)	intron (NM_139140, intron 9 of 12)	-25099	NM_010601	16512	Mm.374793	NM_010601	ENSMUSG00000037579	Kcnh3	AU019351|C030044P22Rik|Elk2|Kv12.2|Melk2	potassium voltage-gated channel, subfamily H (eag-related), member 3	protein-coding
unique_peak2-33947-3-7--1.41398308995928-1.23214870625617	chr12	76317934	76318356	+	0	NA	Intergenic	Intergenic	-39826	NM_172805	238271	Mm.44465	NM_172805	ENSMUSG00000034402	Kcnh5	Eag2	potassium voltage-gated channel, subfamily H (eag-related), member 5	protein-coding
common_peak2-20536-14-27--0.908138761699959-1.05601013496724	chr10	66354236	66355022	+	0	NA	Intergenic	Intergenic	-113194	NR_110511	102634101	Mm.445258	NR_110511		LOC102634101	-	uncharacterized LOC102634101	ncRNA
unique_peak2-38566-6-19--1.75652998450706-1.84350559086818	chr7	65693252	65694024	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-219934	NM_009728	11982	Mm.135129	NM_009728	ENSMUSG00000025324	Atp10a	Atp10c|pfatp	ATPase, class V, type 10A	protein-coding
unique_peak2-35629-9-12--0.510826311736872-0.394412252720706	chr17	87472961	87473642	+	0	NA	Intergenic	Intergenic	-33718	NM_019654	56468	Mm.126885	NM_019654	ENSMUSG00000037104	Socs5	1810018L08Rik|Cish5|mKIAA0671	suppressor of cytokine signaling 5	protein-coding
unique_peak1-4022-61-6-3.57539440769174-17.5493781878771	chr2	40555706	40557431	+	0	NA	intron (NM_053011, intron 75 of 90)	intron (NM_053011, intron 75 of 90)	-1474710	NM_024209	67857	Mm.389242	NM_024209		Ppp6c	2310003C10Rik	protein phosphatase 6, catalytic subunit	protein-coding
unique_peak2-37849-3-5--0.998945590680433-0.96108193396963	chr5	135712765	135713039	+	0	NA	intron (NM_011714, intron 14 of 18)	intron (NM_011714, intron 14 of 18)	14015	NM_010246	14371	Mm.6256	NM_010246	ENSMUSG00000049551	Fzd9	mfz9	frizzled homolog 9 (Drosophila)	protein-coding
common_peak2-23188-24-35--0.376715098674596-0.470271536760928	chr15	77151765	77153595	+	0	NA	Intergenic	Intergenic	-15197	NM_053104	93686	Mm.202774	NM_053104	ENSMUSG00000033565	Rbfox2	Fbm2|Fxh|Hrnbp2|Rbm9	RNA binding protein, fox-1 homolog (C. elegans) 2	protein-coding
unique_peak1-6767-7-3-0.799090830298189-1.23214870625617	chr8	61235927	61236454	+	0	NA	intron (NM_175032, intron 1 of 11)	URR1B|DNA|MER1_type	-56597	NM_001177534	100271928	Mm.484123	NM_001177534		Gm15881	OTTMUSG00000027193	predicted gene 15881	protein-coding
common_peak2-28199-8-11--0.579740082773585-1.14218153353838	chr4	116767428	116768143	+	0	NA	Intergenic	Intergenic	-1176	NM_008958	19207	Mm.287037	NM_008958	ENSMUSG00000028681	Ptch2	ptc2	patched homolog 2	protein-coding
unique_peak2-33753-4-8--1.19338551529556-1.21878474469819	chr11	117308089	117308481	+	0	NA	Intergenic	B1_Mur2|SINE|Alu	114658	NM_001113488	53860	Mm.38450	NM_017380	ENSMUSG00000059248	Sept9	MSF1|Msf|PNUTL4|Sint1	septin 9	protein-coding
common_peak2-30546-26-25-0.22745937401737-0.399869693390336	chr7	73541339	73542000	+	0	NA	intron (NM_053080, intron 12 of 12)	intron (NM_053080, intron 12 of 12)	-8442	NM_146191	233328	Mm.33284	NM_146191	ENSMUSG00000015133	Lrrk1	AW319595|C230002E15Rik|D130026O16Rik|mKIAA1790	leucine-rich repeat kinase 1	protein-coding
unique_peak1-7118-14-3-1.89921616035764-2.80787975886178	chr9	46018106	46018724	+	0	NA	intron (NM_027498, intron 19 of 24)	intron (NM_027498, intron 19 of 24)	-18298	NM_009692	11806	Mm.26743	NM_009692	ENSMUSG00000032083	Apoa1	Alp-1|Apoa-1|Brp-14|Ltw-1|Lvtw-1|Sep-1|Sep-2|Sep2|apo-AI|apoA-I	apolipoprotein A-I	protein-coding
common_peak1-9972-62-104--0.303494058864038-0.716494160201252	chr12	116279989	116282054	+	0	NA	Intergenic	RLTR9A|LTR|ERVK	-529116	NR_106063	102465664		NR_106063	miRBase:MI0022945	Mir7094-2	mmu-mir-7094-2	microRNA mir-7094-2	ncRNA
unique_peak1-2240-13-2-2.19350952991661-3.03832868024006	chr15	76615987	76616596	+	0	NA	intron (NM_198420, intron 1 of 10)	intron (NM_198420, intron 1 of 10)	32309	NM_001168288	223666	Mm.322931	NM_198420	ENSMUSG00000033697	Arhgap39	9530053N22|AI843066|D15Wsu169e|Kiaa1688|Porf-2	Rho GTPase activating protein 39	protein-coding
unique_peak1-4060-13-2-2.19350952991661-3.03832868024006	chr2	60883824	60884541	+	0	NA	Intergenic	MIRb|SINE|MIR	-70974	NR_045335	100038493	Mm.388076	NR_045335	ENSMUSG00000075325	Gm13582	ENSMUSG00000075325|OTTMUSG00000012844	predicted gene 13582	ncRNA
unique_peak2-39994-4-10--1.48289213249054-1.5150158574804	chrX	162828709	162829268	+	0	NA	exon (NM_177429, exon 23 of 23)	exon (NM_177429, exon 23 of 23)	9798	NR_106129	102465771		NR_106129		Mir7669	mmu-mir-7669	microRNA mir-7669	ncRNA
unique_peak1-1637-8-1-2.00522241794757-2.05605744720049	chr13	49548989	49549470	+	0	NA	intron (NR_075085, intron 12 of 13)	Lx9|LINE|L1	32246	NM_001276399	75678	Mm.390586	NM_199056	ENSMUSG00000021385	Ippk	1810043M15Rik|InsP6	inositol 1,3,4,5,6-pentakisphosphate 2-kinase	protein-coding
unique_peak1-5662-24-1-3.79320990276772-7.14178280843185	chr6	30463319	30464570	+	0	NA	intron (NM_029373, intron 1 of 2)	intron (NM_029373, intron 1 of 2)	1658	NM_029373	75647	Mm.46117	NM_027073	ENSMUSG00000029784	Ssmem1	1700016K02Rik|1700025E21Rik	serine-rich single-pass membrane protein 1	protein-coding
unique_peak2-36390-7-15--1.20090916970181-0.947446088118041	chr2	120567536	120568236	+	0	NA	intron (NM_001024856, intron 15 of 15)	intron (NM_001024856, intron 15 of 15)	-10633	NM_026891	68968	Mm.2289	NM_026891	ENSMUSG00000027284	Cdan1	1500015A01Rik|AI448026|AW492297|CDA-I|CDA1|CDAI	congenital dyserythropoietic anemia, type I (human)	protein-coding
unique_peak1-1322-11-6-0.701338662194009-1.32595962126035	chr12	8069466	8070104	+	0	NA	Intergenic	Intergenic	85302	NM_009693	238055	Mm.221239	NM_009693	ENSMUSG00000020609	Apob	AI315052|Apo B-100|apob-100|apob-48	apolipoprotein B	protein-coding
common_peak2-29556-77-167--0.607790843222763-2.86628881278571	chr6	42348977	42350814	+	0	NA	promoter-TSS (NM_001001452)	promoter-TSS (NM_001001452)	-342	NM_001001452	387514	Mm.377921	NM_001001452	ENSMUSG00000046652	Tas2r143	Gm1404|Tas2r43|mt2r36	taste receptor, type 2, member 143	protein-coding
common_peak1-11487-19-23--0.18227517405947-0.320777457303847	chr15	102279037	102279898	+	0	NA	intron (NM_144547, intron 6 of 10)	intron (NM_144547, intron 6 of 10)	3669	NM_144547	110542	Mm.60331	NM_144547	ENSMUSG00000023047	Amhr2	Misiir|Misrii|Mrii	anti-Mullerian hormone type 2 receptor	protein-coding
common_peak2-24547-10-7-0.356415345008769-1.12966497611638	chr17	27915157	27915643	+	0	NA	intron (NM_001033279, intron 3 of 4)	RSINE1|SINE|B4	42087	NM_001033279	224647	Mm.196577	NM_001033279	ENSMUSG00000056692	D17Wsu92e	AU020189|C030010A15|C80239	DNA segment, Chr 17, Wayne State University 92, expressed	protein-coding
common_peak1-12431-34-19-1.0601404321139-2.23152841032562	chr17	78387690	78388980	+	0	NA	Intergenic	Intergenic	-211253	NM_015800	50766	Mm.311912	NM_015800	ENSMUSG00000024074	Crim1	AU015004	cysteine rich transmembrane BMP regulator 1 (chordin like)	protein-coding
common_peak2-26599-33-37-0.0834100490819436-0.326417267106726	chr2	112379090	112379903	+	0	NA	intron (NM_028844, intron 2 of 5)	intron (NM_028844, intron 2 of 5)	-20343	NM_001165935	74268	Mm.315125	NM_028844		Aven	1700013A01Rik|1700056A21Rik|mAven-L|mAven-S	apoptosis, caspase activation inhibitor	protein-coding
common_peak2-32099-29-38--0.173112138247138-0.327809114039775	chr9	99436232	99437285	+	0	NA	intron (NM_028768, intron 3 of 21)	intron (NM_028768, intron 3 of 21)	32560	NM_001166138	74125	Mm.234823	NM_028768	ENSMUSG00000032468	Armc8	1200015K23Rik|Gid5|HSPC056	armadillo repeat containing 8	protein-coding
unique_peak2-37754-11-19--0.813234510635749-0.769930178837768	chr5	113138175	113139209	+	0	NA	intron (NM_028901, intron 42 of 43)	intron (NM_028901, intron 42 of 43)	-83620	NR_040675	67360	Mm.59218	NR_040675	ENSMUSG00000098230	1700095B10Rik	-	RIKEN cDNA 1700095B10 gene	ncRNA
common_peak2-20549-10-5-0.771452844287613-1.33892459842472	chr10	68446417	68446732	+	0	NA	Intergenic	Intergenic	-224726	NM_001252636	69288	Mm.26659	NM_001081347	ENSMUSG00000019944	Rhobtb1	1700008H16Rik|3110048G13Rik|AI173445|AI573858|AV350930	Rho-related BTB domain containing 1	protein-coding
common_peak2-24204-18-36--0.896534214400599-1.30767018140165	chr16	64873326	64874389	+	0	NA	Intergenic	Intergenic	21946	NM_178647	106143	Mm.10160	NM_178647	ENSMUSG00000054604	Cggbp1	AA960172|AL023996|AW045841	CGG triplet repeat binding protein 1	protein-coding
common_peak1-8686-10-10--0.103016273628528-0.301029995663987	chr11	40402535	40403080	+	0	NA	Intergenic	MLT1G|LTR|MaLR	103377	NM_134017	108645	Mm.293771	NM_134017	ENSMUSG00000042032	Mat2b	1110064C04Rik|2410018D16Rik|AI182287|AU022853|MAT-II|MATIIbeta|TGR	methionine adenosyltransferase II, beta	protein-coding
common_peak1-14323-8-14--0.901668177660948-0.660903317613906	chr2	163579439	163579938	+	0	NA	Intergenic	Intergenic	-3713	NM_001272052	11486	Mm.388	NM_007398	ENSMUSG00000017697	Ada	-	adenosine deaminase	protein-coding
unique_peak2-33299-4-5--0.608423014574403-0.909929411522249	chr11	3408746	3409169	+	0	NA	Intergenic	Intergenic	-4133	NM_172439	170835	Mm.24313	NM_172439	ENSMUSG00000034570	Inpp5j	Pib5pa|Pipp	inositol polyphosphate 5-phosphatase J	protein-coding
common_peak1-9812-76-70-0.612197266358599-2.16105775064169	chr12	69537584	69539428	+	0	NA	Intergenic	L1Md_T|LINE|L1	721667	NM_009093	20090	Mm.379006	NM_009093	ENSMUSG00000034892	Rps29	-	ribosomal protein S29	protein-coding
common_peak1-17008-12-6-0.841421063030034-1.58711810488664	chr6	89462147	89462766	+	0	NA	intron (NM_025351, intron 4 of 7)	intron (NM_025351, intron 4 of 7)	83190	NM_025351	66098	Mm.20313	NM_025351	ENSMUSG00000030086	Chchd6	0710001P09Rik|1700021B03Rik	coiled-coil-helix-coiled-coil-helix domain containing 6	protein-coding
unique_peak2-35500-4-6--0.830815435910851-0.989110657569874	chr17	46628379	46628706	+	0	NA	Intergenic	Intergenic	-3918	NM_001162864	106763	Mm.297613	NM_175351	ENSMUSG00000015599	Ttbk1	AU017937|AW048023|C330008L01Rik	tau tubulin kinase 1	protein-coding
unique_peak1-345-15-0-4.01216475055566-5.11750992628768	chr1	135232305	135232975	+	0	NA	Intergenic	RMER16-int|LTR|ERVK	8851	NM_178260	280287	Mm.458301	NM_178260	ENSMUSG00000091251	Kiss1	metastatin	KiSS-1 metastasis-suppressor	protein-coding
common_peak2-27506-14-9-0.577288065470282-0.630231561310125	chr3	95177271	95177810	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-16416	NM_001163642	84505	Mm.490259	NM_018877	ENSMUSG00000015697	Setdb1	AU022152|ESET|KMT1E|mKIAA0067	SET domain, bifurcated 1	protein-coding
unique_peak2-36024-6-5--0.0195643903408542-0.947717972411649	chr19	42125853	42126270	+	0	NA	promoter-TSS (NM_025752)	promoter-TSS (NM_025752)	-657	NM_025752	66765	Mm.440412	NM_025752	ENSMUSG00000090369	4933411K16Rik	-	RIKEN cDNA 4933411K16 gene	protein-coding
common_peak2-29234-8-4-0.683294323060208-1.21878474469819	chr5	138754624	138754873	+	0	NA	Intergenic	RLTR13D1|LTR|ERVK	33011	NM_016964	50878	Mm.285609	NM_016964	ENSMUSG00000036928	Stag3	SA-2	stromal antigen 3	protein-coding
unique_peak2-38149-3-5--0.998945590680433-0.96108193396963	chr6	86076542	86076910	+	0	NA	Intergenic	L1M5|LINE|L1	48684	NM_001271859	11519	Mm.104155	NM_013458		Add2	2900072M03Rik|add97	adducin 2 (beta)	protein-coding
common_peak2-20481-12-19--0.673152109799724-0.546772548767014	chr10	45577753	45578589	+	0	NA	Intergenic	RMER1C|Other|Other	50661	NR_040624	320363	Mm.123343	NR_040624		D030045P18Rik	-	RIKEN cDNA D030045P18 gene	ncRNA
common_peak2-29249-19-18-0.154759813218101-0.351190433797598	chr5	139796515	139797127	+	0	NA	intron (NM_172723, intron 1 of 10)	intron (NM_172723, intron 1 of 10)	4597	NM_172723	231821	Mm.297819	NM_172723	ENSMUSG00000056413	Adap1	4930431P11Rik|Centa1|GC1L|p42IP4	ArfGAP with dual PH domains 1	protein-coding
common_peak2-25894-35-42-0.00510550376040619-0.30358472802154	chr19	45074377	45075380	+	0	NA	intron (NM_011976, intron 14 of 14)	B3|SINE|B2	6054	NM_053164	94067	Mm.44174	NM_053164	ENSMUSG00000025208	Mrpl43	4930442D21Rik|bMRP36a	mitochondrial ribosomal protein L43	protein-coding
unique_peak1-4835-12-9-0.326847890200276-0.459837087125828	chr3	148926086	148926700	+	0	NA	Intergenic	Intergenic	-11308	NR_040591	381482	Mm.393866	NR_040591		Gm1653	-	predicted gene 1653	ncRNA
unique_peak1-43-10-2-1.77145284428761-2.09384600808989	chr1	21009002	21009541	+	0	NA	intron (NM_177409, intron 2 of 10)	L1Md_F2|LINE|L1	60035	NM_177409	170829	Mm.185680	NM_177409		Tram2	C330003D03Rik	translocating chain-associating membrane protein 2	protein-coding
common_peak2-20783-69-79-0.27321435237137-0.701478133004951	chr10	120474030	120476234	+	0	NA	intron (NM_011915, intron 2 of 9)	intron (NM_011915, intron 2 of 9)	4072	NM_011915	24117	Mm.32831	NM_011915	ENSMUSG00000020218	Wif1	AW107799|WIF-1	Wnt inhibitory factor 1	protein-coding
common_peak2-23440-12-8-0.478850983645327-0.562038191119709	chr15	62391845	62392185	+	0	NA	Intergenic	Intergenic	-341009	NR_003523	67552	Mm.484027	NM_026230		H2afy3	4933432H23Rik	H2A histone family, member Y3	pseudo
common_peak1-18518-48-51-0.270487433093723-0.575830045570382	chr8	90907343	90908544	+	0	NA	Intergenic	Intergenic	-21853	NM_012047	26992	Mm.5400	NM_012047		Brd7	BP75|CELTIX1|Ptpn13ip	bromodomain containing 7	protein-coding
unique_peak1-6429-8-3-1.00522241794757-1.39487600375387	chr7	97356251	97356714	+	0	NA	3' UTR (NM_001252521, exon 20 of 20)	3' UTR (NM_001252521, exon 20 of 20)	57460	NM_029256	75338	Mm.487222	NM_029256	ENSMUSG00000030617	Ccdc83	4930549K11Rik|4930554C01Rik|4932423M01Rik	coiled-coil domain containing 83	protein-coding
unique_peak2-33462-5-9--1.02630843089322-1.21398586181642	chr11	68214887	68215435	+	0	NA	Intergenic	Intergenic	-14833	NM_008744	18208	Mm.39095	NM_008744	ENSMUSG00000020902	Ntn1	AI561871|BC019633|Netrin-1	netrin 1	protein-coding
unique_peak2-32956-3-5--0.998945590680433-0.96108193396963	chr10	42275975	42276333	+	0	NA	Intergenic	Intergenic	27240	NM_152229	21907	Mm.287100	NM_152229	ENSMUSG00000019803	Nr2e1	Mtl1|Mtll|TLL|Tlx|XTLL|fierce|frc|tailless	nuclear receptor subfamily 2, group E, member 1	protein-coding
common_peak1-10035-30-33-0.082212568241534-0.329362479200675	chr13	14063700	14064782	+	0	NA	intron (NM_178640, intron 3 of 11)	PB1D9|SINE|Alu	17300	NM_178640	97884	Mm.21686	NM_178640	ENSMUSG00000039242	B3galnt2	A930105D20Rik|C80633|D230016N13Rik	UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	protein-coding
common_peak2-21267-30-12-1.46923569135078-3.02795537370072	chr11	69695445	69696075	+	0	NA	promoter-TSS (NR_105889)	promoter-TSS (NR_105889)	-164	NR_105889	102466208		NR_105889		Mir6924	mmu-mir-6924	microRNA mir-6924	ncRNA
common_peak2-26592-31-36-0.0157853051841732-0.304004708442489	chr2	109917664	109918449	+	0	NA	Intergenic	Intergenic	-27420	NR_040508	75517	Mm.363927	NR_040508	ENSMUSG00000086186	Ccdc34os	1700024P03Rik	coiled-coil domain containing 34, opposite strand	ncRNA
common_peak2-28180-26-44--0.563954004171213-0.879657821688435	chr4	109676051	109677230	+	0	NA	Intergenic	Intergenic	26010	NM_172296	242620	Mm.32825	NM_172296	ENSMUSG00000047143	Dmrta2	Dmrt5	doublesex and mab-3 related transcription factor like family A2	protein-coding
common_peak1-15448-12-13--0.158578936969966-0.301029995663979	chr4	97752144	97752777	+	0	NA	intron (NM_010905, intron 10 of 10)	intron (NM_010905, intron 10 of 10)	297496	NM_053157	94043	Mm.331719	NM_053157	ENSMUSG00000028563	Tm2d1	2310026L18Rik|AA990549|Bbp	TM2 domain containing 1	protein-coding
common_peak1-18548-69-82-0.220103015911808-0.574300793406264	chr8	95806283	95808104	+	0	NA	Intergenic	Intergenic	-3558	NM_144930	234564	Mm.29110	NM_144930	ENSMUSG00000031725	Ces1f	AU018778|CesML1|TGH-2	carboxylesterase 1F	protein-coding
common_peak1-9839-31-39--0.0966894240742393-0.312460117298692	chr12	76765217	76766242	+	0	NA	intron (NM_028203, intron 1 of 1)	intron (NM_028203, intron 1 of 1)	4795	NM_028203	72338	Mm.341719	NM_028203	ENSMUSG00000045690	Wdr89	2600001A11Rik	WD repeat domain 89	protein-coding
common_peak1-11083-28-59--0.853931475787056-1.91853818381596	chr15	59373804	59374685	+	0	NA	intron (NM_026746, intron 4 of 6)	intron (NM_026746, intron 4 of 6)	-105965	NM_144549	211770	Mm.40298	NM_144549	ENSMUSG00000032501	Trib1	A530090O15Rik|TRB-1|Trb1	tribbles homolog 1 (Drosophila)	protein-coding
unique_peak2-36345-4-7--1.02346051385325-1.09384600808989	chr2	92460031	92460410	+	0	NA	Intergenic	MTD|LTR|MaLR	20356	NM_023850	76969	Mm.38021	NM_023850	ENSMUSG00000027221	Chst1	2610008E20Rik|AW125896|C6ST|GST-1|Gst1|KSGAL6ST	carbohydrate (keratan sulfate Gal-6) sulfotransferase 1	protein-coding
unique_peak1-2156-10-2-1.77145284428761-2.09384600808989	chr15	59411008	59411677	+	0	NA	intron (NM_026746, intron 4 of 6)	intron (NM_026746, intron 4 of 6)	-68867	NM_144549	211770	Mm.40298	NM_144549	ENSMUSG00000032501	Trib1	A530090O15Rik|TRB-1|Trb1	tribbles homolog 1 (Drosophila)	protein-coding
common_peak1-9063-31-32-0.18084455145467-0.379775532323848	chr11	69059510	69060698	+	0	NA	Intergenic	Intergenic	-9580	NM_008192	14919	Mm.291816	NM_008192	ENSMUSG00000020890	Gucy2e	GC-E|GC1|ROS-GC1	guanylate cyclase 2e	protein-coding
common_peak2-30589-12-14--0.25811461052088-0.309074325783021	chr7	80802621	80803336	+	0	NA	Intergenic	Intergenic	28471	NR_033604	244061	Mm.484605	NR_033604		Gm4971	EG244061	Smad nuclear interacting protein 1 pseudogene	pseudo
common_peak2-25152-27-22-0.467983994838223-0.705485015404196	chr18	46863504	46864194	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	24147	NM_033037	12583	Mm.241056	NM_033037	ENSMUSG00000033022	Cdo1	1300002L19Rik|Cdo|D18Ucla3	cysteine dioxygenase 1, cytosolic	protein-coding
common_peak2-24530-11-19--0.813234510635749-0.769930178837768	chr17	27028035	27028665	+	0	NA	Intergenic	Intergenic	-25686	NM_053173	16580	Mm.491138	NM_016761	ENSMUSG00000024301	Kifc5b	Hset|KNSL2|Kifc5a	kinesin family member C5B	protein-coding
common_peak1-8934-35-40-0.0738182538444203-0.324581211600972	chr11	52448138	52449412	+	0	NA	Intergenic	Intergenic	-129433	NM_177059	320027	Mm.44518	NM_177059		Fstl4	B230374F23Rik|SPIG1|mKIAA1061	follistatin-like 4	protein-coding
common_peak2-29003-10-6-0.549060422951165-1.21398586181642	chr5	109558757	109559084	+	0	NA	Intergenic	RLTR17|LTR|ERVK	-32037	NM_001104623	627569	Mm.469884	NM_001104623	ENSMUSG00000090688	Vmn2r12	EG627569|Gm6769	vomeronasal 2, receptor 12	protein-coding
unique_peak2-34771-4-12--1.72390023199434-1.85743853830261	chr15	59448344	59448923	+	0	NA	Intergenic	Lx5|LINE|L1	-31576	NM_144549	211770	Mm.40298	NM_144549	ENSMUSG00000032501	Trib1	A530090O15Rik|TRB-1|Trb1	tribbles homolog 1 (Drosophila)	protein-coding
common_peak2-24345-52-44-0.616406893936024-1.5120604183303	chr17	5769883	5771081	+	0	NA	Intergenic	Intergenic	-28175	NR_045081	78512	Mm.23696	NR_045079	ENSMUSG00000096965	3300005D01Rik	-	RIKEN cDNA 3300005D01 gene	ncRNA
common_peak1-16519-18-15-0.312919151228352-0.456667090758524	chr5	140648486	140649116	+	0	NA	intron (NM_010752, intron 11 of 17)	intron (NM_010752, intron 11 of 17)	148705	NM_010752	17120	Mm.27250	NM_010752	ENSMUSG00000029554	Mad1l1	AI173502|AW550425|Mad1	MAD1 mitotic arrest deficient 1-like 1	protein-coding
common_peak1-9900-27-46--0.563042900782402-0.849650211186454	chr12	86241198	86242599	+	0	NA	Intergenic	MIRb|SINE|MIR	-24453	NM_013589	16997	Mm.3900	NM_013589	ENSMUSG00000002020	Ltbp2	AW208642	latent transforming growth factor beta binding protein 2	protein-coding
unique_peak1-5543-10-1-2.35641534500877-2.57096726280955	chr5	142416325	142416859	+	0	NA	intron (NM_177879, intron 7 of 44)	intron (NM_177879, intron 7 of 44)	-460859	NM_199068	17425	Mm.24214	NM_010812	ENSMUSG00000056493	Foxk1	A630048H08Rik|AI463295|ENSMUSG00000075577|Gm10868|Mnf	forkhead box K1	protein-coding
common_peak2-22915-18-10-0.853487532591054-1.03889213727317	chr14	41017050	41017517	+	0	NA	Intergenic	L1Md_F2|LINE|L1	548332	NR_045936	73591	Mm.65499	NR_045936		1700109I08Rik	-	RIKEN cDNA 1700109I08 gene	ncRNA
common_peak1-8738-26-20-0.535581669379702-0.738267116931592	chr11	3894649	3895739	+	0	NA	intron (NM_001177691, intron 1 of 2)	B2_Mm2|SINE|B2	5258	NM_001177691	53897	Mm.103414	NM_016922	ENSMUSG00000049721	Gal3st1	Cst|Gcst	galactose-3-O-sulfotransferase 1	protein-coding
common_peak2-31917-9-7-0.18961340640422-1.05908390183068	chr9	61361093	61361658	+	0	NA	Intergenic	L1M3|LINE|L1	141202	NM_001083927	21887	Mm.24255	NM_009389	ENSMUSG00000032280	Tle3	2610103N05Rik|ESG|Grg3a|Grg3b|mKIAA1547	transducin-like enhancer of split 3, homolog of Drosophila E(spl)	protein-coding
unique_peak1-4151-933-714-1.64780814091279-180.228022068943	chr2	98662118	98663100	+	0	NA	Intergenic	Intergenic	1354795	NM_178725	241568	Mm.241682	NM_178725	ENSMUSG00000050587	Lrrc4c	6430556C10Rik|NGL-1	leucine rich repeat containing 4C	protein-coding
common_peak2-20017-20-17-0.318149783148881-0.440610794044987	chr1	135687605	135688327	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-37642	NM_213616	381290	Mm.188617	NM_213616	ENSMUSG00000026463	Atp2b4	Pmca4	ATPase, Ca++ transporting, plasma membrane 4	protein-coding
common_peak1-15432-21-9-1.24756117037887-1.83731222263754	chr4	89050769	89051748	+	0	NA	Intergenic	PB1D10|SINE|Alu	-94317	NM_007670	12579	Mm.423094	NM_007670	ENSMUSG00000073802	Cdkn2b	AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b	cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)	protein-coding
common_peak2-30384-5-5--0.289342836727009-0.909929411522249	chr7	29511601	29512036	+	0	NA	intron (NM_015796, intron 2 of 6)	LTR41|LTR|ERVL	10009	NM_015796	50760	Mm.358659	NM_015796	ENSMUSG00000030598	Fbxo17	Fbg4|Fbx17|Fbxo26	F-box protein 17	protein-coding
unique_peak1-6516-10-5-0.771452844287613-1.33892459842472	chr7	118252246	118252919	+	0	NA	Intergenic	RLTR31A_Mm|LTR|ERVK	13607	NR_015573	75479	Mm.381620	NR_015573		1700012D14Rik	-	RIKEN cDNA 1700012D14 gene	ncRNA
unique_peak1-4445-8-0-3.00522241794757-2.70926996097583	chr2	170453769	170454339	+	0	NA	Intergenic	Intergenic	-26537	NR_027825	67637	Mm.158163	NM_026287	ENSMUSG00000043583	4930470P17Rik	-	RIKEN cDNA 4930470P17 gene	ncRNA
common_peak1-15380-19-12-0.702247608520594-0.840839978588874	chr4	62501835	62502935	+	0	NA	Intergenic	(TAAA)n|Simple_repeat|Simple_repeat	-124223	NM_028326	72701	Mm.26479	NM_028326	ENSMUSG00000028358	Zfp618	2810031P15Rik|2810040O04Rik|AI415580|AI505139|D430033D05Rik|Nedd10|Znf618|bM257P7.1	zinc finger protein 618	protein-coding
unique_peak1-500-12-1-2.64877598508764-3.36932189928148	chr1	180301856	180302426	+	0	NA	Intergenic	B3|SINE|B2	-33871	NM_026626	68226	Mm.252132	NM_026626	ENSMUSG00000026495	Efcab2	1700073K01Rik|D830011E08Rik	EF-hand calcium binding domain 2	protein-coding
unique_peak1-4123-10-0-3.35641534500877-3.31132995230379	chr2	88212805	88213346	+	0	NA	Intergenic	Lx4A|LINE|L1	-18331	NM_001011868	258203	Mm.376126	NM_001011868	ENSMUSG00000056995	Olfr1178	MOR225-6P	olfactory receptor 1178	protein-coding
common_peak1-19222-24-44--0.698643193561958-1.07959258339368	chr9	106821843	106822696	+	0	NA	intron (NM_153413, intron 40 of 52)	L1Md_T|LINE|L1	-28000	NM_029103	74840	Mm.29778	NM_029103	ENSMUSG00000032575	Manf	3230402M22Rik|AA407711|AA408789|AA673178|Armet|D17914|D18Mgi17	mesencephalic astrocyte-derived neurotrophic factor	protein-coding
common_peak2-29648-20-14-0.581184188982674-0.690311289528838	chr6	67102499	67103406	+	0	NA	Intergenic	Intergenic	-114021	NM_001113564	66870	Mm.240490	NM_025814	ENSMUSG00000036371	Serbp1	1200009K13Rik|9330147J08Rik|AL022786|Pairbp1	serpine1 mRNA binding protein 1	protein-coding
common_peak2-28978-12-6-0.841421063030034-1.58711810488664	chr5	104860233	104860505	+	0	NA	Intergenic	B1_Mm|SINE|Alu	-3761	NM_001204202	20750	Mm.288474	NM_009263	ENSMUSG00000029304	Spp1	2AR|Apl-1|BNSP|BSPI|Bsp|ETA-1|Eta|OP|Opn|Opnl|Ric|Spp-1	secreted phosphoprotein 1	protein-coding
common_peak2-24854-16-10-0.658832023630764-0.699649909729472	chr17	78216480	78217126	+	0	NA	Intergenic	Intergenic	-382785	NM_015800	50766	Mm.311912	NM_015800	ENSMUSG00000024074	Crim1	AU015004	cysteine rich transmembrane BMP regulator 1 (chordin like)	protein-coding
common_peak1-11773-26-46--0.626689759519175-1.0379745517287	chr16	44745720	44746721	+	0	NA	exon (NM_025332, exon 1 of 6)	exon (NM_025332, exon 1 of 6)	256	NM_001159329	66067	Mm.34520	NM_025332		Gtpbp8	0610037H22Rik	GTP-binding protein 8 (putative)	protein-coding
unique_peak2-37456-0-23--5.42509343119537-5.72042031892562	chr5	25231346	25232140	+	0	NA	Intergenic	Intergenic	-20128	NM_020570	57434	Mm.143767	NM_020570	ENSMUSG00000028933	Xrcc2	4921524O04Rik|8030409M04Rik|RAD51|RecA	X-ray repair complementing defective repair in Chinese hamster cells 2	protein-coding
common_peak2-31974-15-17--0.157760250886656-0.307611222530528	chr9	67633843	67634588	+	0	NA	Intergenic	Intergenic	26971	NM_001081314	75697	Mm.105353	NM_001081314	ENSMUSG00000091956	C2cd4b	3300001A09Rik|Fam148b	C2 calcium-dependent domain containing 4B	protein-coding
common_peak1-9343-16-5-1.53330114154691-1.80287260729378	chr11	96076273	96077001	+	0	NA	Intergenic	Intergenic	11869	NR_108029	432593	Mm.342467	NR_108029		Gm11538	OTTMUSG00000001983	predicted gene 11538	ncRNA
common_peak1-8397-19-33--0.684775514588653-0.884951936461256	chr10	67537146	67538063	+	0	NA	Intergenic	Intergenic	95258	NM_001081346	170799	Mm.209844	NM_133244	ENSMUSG00000037846	Rtkn2	B130039D23Rik|Mbf|Plekhk1	rhotekin 2	protein-coding
unique_peak1-1711-10-2-1.77145284428761-2.09384600808989	chr13	93448362	93449035	+	0	NA	intron (NM_172588, intron 2 of 11)	intron (NM_172588, intron 2 of 11)	67605	NM_172588	218442	Mm.297970	NM_172588	ENSMUSG00000021703	Serinc5	A130038L21Rik|AIGP3|C86123|TPO1	serine incorporator 5	protein-coding
common_peak2-25355-17-10-0.75886471956774-0.917676348953458	chr18	80468833	80469201	+	0	NA	intron (NM_001164420, intron 3 of 4)	intron (NM_001164420, intron 3 of 4)	15972	NM_001164423	66943	Mm.29247	NM_025861	ENSMUSG00000034006	Pqlc1	2310009N05Rik|4933425L21Rik|5730564E11Rik|C78974	PQ loop repeat containing 1	protein-coding
unique_peak1-5455-7-5-0.214128329577033-1.01466476204226	chr5	121593062	121593441	+	0	NA	intron (NM_011202, intron 12 of 15)	intron (NM_011202, intron 12 of 15)	48155	NM_001109992	19247	Mm.8681	NM_011202	ENSMUSG00000043733	Ptpn11	2700084A17Rik|AW536184|PTP1D|PTP2C|SAP-2|SH-PTP2|SH-PTP3|SHP-2|Shp2|Syp	protein tyrosine phosphatase, non-receptor type 11	protein-coding
common_peak2-28804-10-11--0.228547155712387-0.31137425193576	chr5	64810203	64810650	+	0	NA	Intergenic	ORR1A2-int|LTR|MaLR	48755	NR_040681	69999	Mm.261413	NR_040681		1700027F09Rik	-	RIKEN cDNA 1700027F09 gene	ncRNA
common_peak1-17108-14-9-0.577288065470282-0.630231561310125	chr6	113668407	113669125	+	0	NA	intron (NM_001286406, intron 1 of 2)	intron (NM_001286406, intron 1 of 2)	682	NM_001286405	58991	Mm.379095	NM_021488	ENSMUSG00000064177	Ghrl	2210006E23Rik|Ghr|MTLRP|MTLRPAP|m46	ghrelin	protein-coding
unique_peak1-6412-24-1-3.79320990276772-7.14178280843185	chr7	83755794	83756433	+	0	NA	intron (NM_001199224, intron 18 of 22)	RMER1A|Other|Other	381340	NM_001199224	244071	Mm.322829	NM_172902	ENSMUSG00000025754	Agbl1	Ccp4|D430020F16|EG244071|Nna1-l1	ATP/GTP binding protein-like 1	protein-coding
common_peak2-22241-11-5-0.923731083530457-1.477227296591	chr13	37715832	37716258	+	0	NA	Intergenic	GA-rich|Low_complexity|Low_complexity	-201862	NM_026830	68750	Mm.491109	NM_026830	ENSMUSG00000039087	Rreb1	1110037N09Rik|AA414966|B930013M22Rik	ras responsive element binding protein 1	protein-coding
unique_peak1-3476-20-0-4.48807478459119-NA	chr19	10266719	10267675	+	0	NA	intron (NM_146094, intron 6 of 11)	intron (NM_146094, intron 6 of 11)	1332	NR_105959	102465600		NR_105959		Mir6993	mmu-mir-6993	microRNA mir-6993	ncRNA
common_peak1-18908-9-18--1.05831410703937-0.965105923112245	chr9	41474977	41475361	+	0	NA	Intergenic	Intergenic	85160	NR_029822	387236		NR_029822	miRBase:MI0000725	Mir125b-1	Mirn125b|Mirn125b-1	microRNA 125b-1	ncRNA
common_peak1-13708-125-113-0.79093536489481-5.30591423033384	chr2	30706823	30709717	+	0	NA	intron (NM_009116, intron 1 of 3)	intron (NM_009116, intron 1 of 3)	7383	NM_009116	20204	Mm.1802	NM_009116	ENSMUSG00000039476	Prrx2	Prx2|S8	paired related homeobox 2	protein-coding
unique_peak2-34629-11-24--1.13516260552311-1.3750876294627	chr14	78536281	78536927	+	0	NA	Intergenic	RMER16-int|LTR|ERVK	-47790	NM_177629	219170	Mm.320428	NM_177629	ENSMUSG00000045655	Fam216b	9330158N17|AU021034	family with sequence similarity 216, member B	protein-coding
common_peak1-13532-22-18-0.399356591643819-0.549581527953406	chr2	158121474	158122578	+	0	NA	Intergenic	Intergenic	-10203	NM_008489	16803	Mm.218846	NM_008489	ENSMUSG00000016024	Lbp	Bpifd2|Ly88	lipopolysaccharide binding protein	protein-coding
unique_peak2-39050-1-5--2.2120195109379-1.32905871926422	chr8	70569940	70570374	+	0	NA	Intergenic	Intergenic	-71684	NM_177698	234353	Mm.32525	NM_027626	ENSMUSG00000030465	Psd3	4931420C21Rik|AI661273|BC003498|D430018P08|EFA6D	pleckstrin and Sec7 domain containing 3	protein-coding
unique_peak2-33124-3-4--0.73591118484664-0.864171920961574	chr10	81465589	81465963	+	0	NA	Intergenic	Intergenic	-45096	NM_001024626	408062	Mm.391409	NM_001024626		Zfp873	-	zinc finger protein 873	protein-coding
common_peak1-18478-15-43--1.44726686808164-3.08659436536937	chr8	84799612	84800394	+	0	NA	Intergenic	Lx9|LINE|L1	126482	NM_001254747	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak1-12601-13-13--0.0288828914198356-0.309074325783021	chr18	25244502	25245216	+	0	NA	intron (NM_001289654, intron 15 of 24)	intron (NM_001289654, intron 15 of 24)	79607	NM_001142697	66648	Mm.263189	NM_001004361	ENSMUSG00000024269	Tpgs2	5730437P09Rik|5730494M16Rik|AI666318|Pgs2	tubulin polyglutamylase complex subunit 2	protein-coding
unique_peak1-5930-9-1-2.18961340640422-2.31132995230379	chr6	89452284	89452791	+	0	NA	intron (NM_025351, intron 4 of 7)	MT2A|LTR|ERVL	93109	NM_025351	66098	Mm.20313	NM_025351	ENSMUSG00000030086	Chchd6	0710001P09Rik|1700021B03Rik	coiled-coil-helix-coiled-coil-helix domain containing 6	protein-coding
unique_peak1-7236-17-4-1.89636824331768-2.60953805094651	chr9	75934225	75934906	+	0	NA	intron (NM_173731, intron 7 of 8)	intron (NM_173731, intron 7 of 8)	71781	NM_173731	208982	Mm.82306	NM_173731	ENSMUSG00000007908	Hmgcll1	BC037381	3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1	protein-coding
common_peak2-31109-12-14--0.25811461052088-0.309074325783021	chr8	32286167	32286899	+	0	NA	Intergenic	MYSERV16_I-int|LTR|ERVK	-7337	NM_026453	67920	Mm.289818	NM_026453	ENSMUSG00000031578	Mak16	2600016B03Rik|AI314911|Rbm13	MAK16 homolog (S. cerevisiae)	protein-coding
common_peak2-32397-25-24-0.217993715570381-0.403610417161433	chrX	139997805	139998489	+	0	NA	intron (NM_008778, intron 1 of 14)	intron (NM_008778, intron 1 of 14)	340	NM_008778	18481	Mm.40035	NM_008778	ENSMUSG00000031284	Pak3	PAK-3|Pak65alpha|Pak65beta|Stk4	p21 protein (Cdc42/Rac)-activated kinase 3	protein-coding
unique_peak2-36224-7-7--0.200909169701811-0.97990265578305	chr2	35589179	35589753	+	0	NA	Intergenic	Intergenic	37214	NM_001290639	69601	Mm.29629	NM_001001602	ENSMUSG00000026883	Dab2ip	2310011D08Rik|AI480459|Aip1|mKIAA1743	disabled 2 interacting protein	protein-coding
unique_peak1-1054-11-4-1.18676548936425-1.68134727924692	chr11	79452443	79452954	+	0	NA	intron (NM_175543, intron 3 of 14)	ID_B1|SINE|B4	-16033	NR_003283	790912	Mm.447313	NR_003283	ENSMUSG00000087434	Rab11fip4os1	Gm11202|OTTMUSG00000000185	RAB11 family interacting protein 4 (class II), opposite strand 1	ncRNA
common_peak1-8511-19-48--1.21202251745352-2.65769701904854	chr10	82860124	82860961	+	0	NA	Intergenic	Intergenic	37576	NM_026579	28109	Mm.196210	NM_026579	ENSMUSG00000020255	D10Wsu102e	AI747614|C430041I18Rik	DNA segment, Chr 10, Wayne State University 102, expressed	protein-coding
common_peak2-22080-20-33--0.599388056659146-0.781990829058356	chr12	77238149	77239520	+	0	NA	intron (NR_104386, intron 5 of 7)	intron (NR_104386, intron 5 of 7)	39412	NM_010157	13983	Mm.2561	NM_010157	ENSMUSG00000021055	Esr2	ER[b]|ERbeta|Estrb	estrogen receptor 2 (beta)	protein-coding
unique_peak1-5245-8-2-1.42025991722641-1.65811743852845	chr5	51799346	51799856	+	0	NA	Intergenic	Intergenic	145559	NR_027710	19017	Mm.259072	NM_008904	ENSMUSG00000029167	Ppargc1a	A830037N07Rik|ENSMUSG00000079510|Gm11133|PGC-1|PGC-1v|Pgc-1alpha|Pgc1|Pgco1|Ppargc1	peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	protein-coding
unique_peak1-977-18-6-1.50556422917075-2.02801025126771	chr11	63745473	63746345	+	0	NA	Intergenic	Intergenic	-10123	NM_018805	54710	Mm.274426	NM_018805	ENSMUSG00000070407	Hs3st3b1	3-OST-3B|3OST3B1|3Ost3b|AU041882|AW536289|Hs3st3b|m3-OST-3B	heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1	protein-coding
unique_peak2-34247-9-40--2.16793859821386-4.9024740998743	chr13	58534305	58536013	+	0	NA	Intergenic	MERVL-int|LTR|ERVL	-30455	NM_001301341	15387	Mm.142872	NM_025279	ENSMUSG00000021546	Hnrnpk	Hnrpk|KBBP|NOVA	heterogeneous nuclear ribonucleoprotein K	protein-coding
common_peak1-13961-10-8-0.186490343566457-1.078512453669	chr2	92047558	92048087	+	0	NA	intron (NM_001109691, intron 2 of 18)	intron (NM_001109691, intron 2 of 18)	-13897	NM_001109690	192285	Mm.330408	NM_138755	ENSMUSG00000058318	Phf21a	80kDa|Bhc|Bhc80|D030065N23Rik|PFTF1	PHD finger protein 21A	protein-coding
unique_peak1-6682-7-2-1.21412832957703-1.45399745587252	chr8	25908798	25909319	+	0	NA	intron (NM_001272057, intron 12 of 18)	L1Md_F2|LINE|L1	25783	NM_001272058	11499	Mm.143889	NM_007401	ENSMUSG00000031554	Adam5	tMDC II|tMDCII	a disintegrin and metallopeptidase domain 5	protein-coding
common_peak2-25627-33-24-0.687481372750804-1.17890083738705	chr19	9073920	9074746	+	0	NA	intron (NR_104460, intron 2 of 6)	intron (NR_104460, intron 2 of 6)	10559	NM_001286518	66395	Mm.203866	NM_009643	ENSMUSG00000069833	Ahnak	DY6	AHNAK nucleoprotein (desmoyokin)	protein-coding
common_peak2-20488-38-48--0.0432571848166781-0.301029995664001	chr10	56228449	56229561	+	0	NA	Intergenic	(TTA)n|Simple_repeat|Simple_repeat	131899	NM_010288	14609	Mm.378921	NM_010288	ENSMUSG00000050953	Gja1	AU042049|AW546267|Cnx43|Cx43|Cx43alpha1|Gja-1|Npm1|connexin43	gap junction protein, alpha 1	protein-coding
common_peak1-14852-10-14--0.550475250599749-0.446472590016315	chr3	94987761	94988258	+	0	NA	3' UTR (NM_029885, exon 10 of 10)	3' UTR (NM_029885, exon 10 of 10)	19748	NM_011351	20360	Mm.23662	NM_011351	ENSMUSG00000038777	Sema6c	Semay|mKIAA1869	sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6C	protein-coding
common_peak2-22119-47-46-0.38025257308891-0.759155512401768	chr12	83987523	83988717	+	0	NA	intron (NM_001282061, intron 2 of 16)	intron (NM_001282061, intron 2 of 16)	52022	NR_046045	74283	Mm.398247	NR_046045		1700085C21Rik	-	RIKEN cDNA 1700085C21 gene	ncRNA
common_peak1-9370-17-9-0.896368243317676-1.09394599973099	chr11	97807385	97808146	+	0	NA	intron (NM_028199, intron 7 of 13)	(CAA)n|Simple_repeat|Simple_repeat	39995	NM_028199	72324	Mm.39617	NM_028199	ENSMUSG00000017417	Plxdc1	2410003I07Rik|AI848450|Tem7	plexin domain containing 1	protein-coding
unique_peak2-39255-3-6--1.22133801201688-1.08602067057793	chr8	117447865	117448202	+	0	NA	intron (NM_019573, intron 8 of 8)	Lx8|LINE|L1	484481	NM_019573	80707	Mm.440420	NM_019573	ENSMUSG00000004637	Wwox	5330426P09Rik|9030416C10Rik|WOX1	WW domain-containing oxidoreductase	protein-coding
unique_peak2-34924-15-45--1.51139720550136-3.4192226378953	chr15	85653365	85654865	+	0	NA	Intergenic	Intergenic	-1952	NM_011105	18766	Mm.89965	NM_011105	ENSMUSG00000052496	Pkdrej	-	polycystic kidney disease (polycystin) and REJ (sperm receptor for egg jelly homolog, sea urchin)	protein-coding
common_peak2-29449-58-84--0.113441001247205-0.334340012190691	chr6	18847965	18849271	+	0	NA	Intergenic	Intergenic	32300	NM_001167757	75196	Mm.67665	NM_029202	ENSMUSG00000029517	Ankrd7	4930532L20Rik|AV278427	ankyrin repeat domain 7	protein-coding
common_peak1-13118-57-51-0.565593321937837-1.4558581450023	chr19	8941864	8943065	+	0	NA	Intergenic	Intergenic	-3585	NM_146093	225896	Mm.27839	NM_146093	ENSMUSG00000071655	Ubxn1	2B28|4930455J02Rik|D19Ertd721e|T25529	UBX domain protein 1	protein-coding
common_peak2-21650-30-37--0.0782521039517121-0.304004708442489	chr11	102295534	102296870	+	0	NA	intron (NM_008175, intron 8 of 12)	intron (NM_008175, intron 8 of 12)	4566	NM_008175	14824	Mm.1568	NM_008175	ENSMUSG00000034708	Grn	Pgrn|epithelin	granulin	protein-coding
unique_peak1-2169-10-4-1.03448725012141-1.5150158574804	chr15	61453669	61454226	+	0	NA	Intergenic	Intergenic	152059	NR_040350	432956	Mm.404918	NR_040350		D030024E09Rik	-	RIKEN cDNA D030024E09 gene	ncRNA
common_peak1-14350-7-9--0.522837264589173-1.05908390183068	chr2	165600932	165601428	+	0	NA	Intergenic	(TA)n|Simple_repeat|Simple_repeat	82493	NM_001252585	228880	Mm.227598	NM_027230	ENSMUSG00000039671	Zmynd8	1110013E22Rik|2010005I16Rik|3632413B07Rik|AI316811|AL024039|Prkcbp1|RACK7	zinc finger, MYND-type containing 8	protein-coding
common_peak2-23950-18-14-0.406028555619833-0.532159081577619	chr16	14316843	14317393	+	0	NA	intron (NM_025345, intron 1 of 4)	intron (NM_025345, intron 1 of 4)	307	NM_025345	66086	Mm.42072	NM_025345	ENSMUSG00000022677	Fopnl	0610037P05Rik	Fgfr1op N-terminal like	protein-coding
unique_peak2-39637-3-8--1.58390809140159-1.39487600375387	chr9	103061922	103062358	+	0	NA	intron (NM_173781, intron 2 of 7)	intron (NM_173781, intron 2 of 7)	42255	NM_009275	20818	Mm.273053	NM_009275	ENSMUSG00000032553	Srprb	AA409543	signal recognition particle receptor, B subunit	protein-coding
common_peak2-31120-16-11-0.533301141546906-0.58239619684445	chr8	33902270	33902756	+	0	NA	Intergenic	Intergenic	157985	NM_001177589	100042715	Mm.291093	NM_001177589		Gm3985	-	predicted gene 3985	protein-coding
common_peak2-20136-13-17--0.391452970804544-0.364171515310935	chr1	166130019	166130802	+	0	NA	intron (NM_007976, intron 15 of 24)	intron (NM_007976, intron 15 of 24)	-48062	NR_037987	100503816	Mm.398579	NR_037987	ENSMUSG00000086593	Gm16548	-	predicted gene 16548	ncRNA
common_peak2-20583-22-28--0.210696890040167-0.337923771396236	chr10	77621919	77622943	+	0	NA	Intergenic	Intergenic	10082	NM_138601	28295	Mm.268691	NM_138601	ENSMUSG00000053329	D10Jhu81e	C21orf33|ES1	DNA segment, Chr 10, Johns Hopkins University 81 expressed	protein-coding
common_peak2-27257-14-9-0.577288065470282-0.630231561310125	chr3	55113982	55114541	+	0	NA	intron (NM_001111053, intron 3 of 6)	intron (NM_001111053, intron 3 of 6)	67813	NM_001195538	13175	Mm.393242	NM_019978	ENSMUSG00000027797	Dclk1	1700113D08Rik|2810480F11Rik|AI836758|Click-I|Cpg16|Dcamkl1|Dcl|Dclk|mKIAA0369	doublecortin-like kinase 1	protein-coding
common_peak2-22071-14-21--0.560215458279653-0.519193887192484	chr12	75827209	75827904	+	0	NA	Intergenic	(TA)n|Simple_repeat|Simple_repeat	429095	NM_198866	386753	Mm.341686	NM_198866	ENSMUSG00000029878	Dbpht2	Spot2	DNA binding protein with his-thr domain	protein-coding
common_peak1-16101-25-9-1.53992181045774-2.70611768348013	chr5	64867211	64868304	+	0	NA	promoter-TSS (NR_045413)	promoter-TSS (NR_045413)	-490	NR_045411	77382	Mm.366742	NR_045411		C030018K13Rik	-	RIKEN cDNA C030018K13 gene	ncRNA
common_peak2-22953-8-13--0.802132504110034-0.562038191119711	chr14	51063386	51063775	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-9149	NM_146667	258661	Mm.377624	NM_146667	ENSMUSG00000095917	Olfr740	MOR106-4	olfactory receptor 740	protein-coding
common_peak2-26179-39-47-0.0307987461979975-0.310078451983505	chr2	23571443	23572246	+	0	NA	Intergenic	Lx8|LINE|L1	-144220	NM_001165997	76857	Mm.276415	NM_029773	ENSMUSG00000026771	Spopl	4921517N04Rik|AU014935|BB233739|E430033K04Rik	speckle-type POZ protein-like	protein-coding
common_peak1-7656-12-8-0.478850983645327-0.562038191119709	chr1	74300022	74300554	+	0	NA	intron (NM_029711, intron 4 of 9)	intron (NM_029711, intron 4 of 9)	17164	NM_029711	76709	Mm.337038	NM_029711	ENSMUSG00000006304	Arpc2	2210023N03Rik|34kDa|p34-Arc	actin related protein 2/3 complex, subunit 2	protein-coding
common_peak1-18313-20-21-0.0286431659538957-0.306080386793804	chr8	47675204	47675986	+	0	NA	exon (NM_001001184, exon 9 of 15)	exon (NM_001001184, exon 9 of 15)	26959	NM_001001184	408022	Mm.217385	NM_001001184	ENSMUSG00000038225	Primpol	BC065112|Ccdc111	primase and polymerase (DNA-directed)	protein-coding
common_peak2-29392-11-6-0.701338662194009-1.32595962126035	chr6	72056784	72057251	+	0	NA	intron (NM_011375, intron 1 of 6)	intron (NM_011375, intron 1 of 6)	9415	NM_011375	20454	Mm.38248	NM_011375	ENSMUSG00000056091	St3gal5	3S-T|Siat9|[a]2	ST3 beta-galactoside alpha-2,3-sialyltransferase 5	protein-coding
common_peak1-11064-34-30-0.427872216614391-0.737357778720995	chr15	57761249	57762885	+	0	NA	intron (NM_001081396, intron 4 of 20)	intron (NM_001081396, intron 4 of 20)	18313	NM_001167679	210544	Mm.390835	NM_199300	ENSMUSG00000022364	Tbc1d31	4B3|D330013L20Rik|Gm85|Wdr67	TBC1 domain family, member 31	protein-coding
common_peak2-25179-27-37--0.256381562548349-0.379775532323854	chr18	56572473	56573753	+	0	NA	Intergenic	Intergenic	-18673	NM_026240	107022	Mm.24356	NM_026240	ENSMUSG00000001700	Gramd3	9030613F08Rik|9130427A09Rik|AW061306|NS3TP2	GRAM domain containing 3	protein-coding
unique_peak2-38133-14-28--0.958764834769927-1.16796998271031	chr6	83830997	83831805	+	0	NA	Intergenic	BGLII_B|LTR|ERVK	-32946	NM_001166371	18139	Mm.132392	NM_008717	ENSMUSG00000030016	Zfml	AI323587|Np220|Znf638|mNP220	zinc finger, matrin-like	protein-coding
common_peak1-19118-18-15-0.312919151228352-0.456667090758524	chr9	75775157	75775837	+	0	NA	Intergenic	Intergenic	-87287	NM_173731	208982	Mm.82306	NM_173731	ENSMUSG00000007908	Hmgcll1	BC037381	3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1	protein-coding
common_peak2-24333-7-9--0.522837264589173-1.05908390183068	chr17	3418515	3418997	+	0	NA	intron (NM_001122998, intron 3 of 26)	L1MA9|LINE|L1	21549	NM_011878	24001	Mm.137134	NM_011878	ENSMUSG00000023800	Tiam2	3000002F19Rik|STEF|mKIAA2016	T cell lymphoma invasion and metastasis 2	protein-coding
common_peak1-9457-38-29-0.664562063690012-1.32967515660734	chr11	103362683	103363967	+	0	NA	Intergenic	Intergenic	-89347	NM_183034	353047	Mm.383308	NM_183034	ENSMUSG00000034247	Plekhm1	AP162|B2|BC038943|D330036J23Rik	pleckstrin homology domain containing, family M (with RUN domain) member 1	protein-coding
unique_peak1-7255-29-6-2.30493515855751-5.23041074693956	chr9	85768841	85769851	+	0	NA	Intergenic	Lx5|LINE|L1	32887	NM_001164792	21983	Mm.20864	NM_011627	ENSMUSG00000035274	Tpbg	5T4|AW495680|WAIF1	trophoblast glycoprotein	protein-coding
unique_peak2-37027-2-14--2.82434485187184-3.03832868024006	chr3	126923504	126924160	+	0	NA	Intergenic	Intergenic	59609	NR_105029	100862268	Mm.444603	NR_105029	ENSMUSG00000097456	LOC100862268	-	uncharacterized LOC100862268	ncRNA
unique_peak1-5820-7-3-0.799090830298189-1.23214870625617	chr6	71980730	71981178	+	0	NA	intron (NR_046180, intron 1 of 2)	L1Md_A|LINE|L1	11568	NR_046180	330350	Mm.246787	NR_046180		9130221F21Rik	9130221F21	RIKEN cDNA 9130221F21 gene	ncRNA
common_peak2-23278-13-20--0.613845392140992-0.532159081577619	chr15	27596999	27597670	+	0	NA	intron (NM_001242423, intron 1 of 7)	L1MA5A|LINE|L1	13963	NM_001242424	223433	Mm.266485	NM_198301	ENSMUSG00000056069	Fam105a	9830126M18	family with sequence similarity 105, member A	protein-coding
common_peak1-19203-14-9-0.577288065470282-0.630231561310125	chr9	102777533	102778346	+	0	NA	intron (NM_001284258, intron 4 of 13)	intron (NM_001284258, intron 4 of 13)	40689	NM_001042607	20187	Mm.335391	NM_013649	ENSMUSG00000032547	Ryk	AW536699|ERK-3|Vik	receptor-like tyrosine kinase	protein-coding
common_peak2-31042-9-9--0.132314688483142-1.03275496310833	chr8	14759547	14760238	+	0	NA	intron (NM_172910, intron 7 of 15)	L1M3d|LINE|L1	-128644	NM_012000	26889	Mm.254027	NM_012000	ENSMUSG00000026317	Cln8	mnd	ceroid-lipofuscinosis, neuronal 8	protein-coding
common_peak2-23092-6-4-0.24347001549294-0.989110657569874	chr14	76522090	76522442	+	0	NA	intron (NM_013745, intron 5 of 9)	intron (NM_013745, intron 5 of 9)	11568	NM_013745	27275	Mm.21138	NM_013745	ENSMUSG00000022009	Nufip1	Nufip	nuclear fragile X mental retardation protein interacting protein 1	protein-coding
common_peak2-26657-7-6--0.00826409175941478-0.97990265578305	chr2	121092935	121093312	+	0	NA	intron (NM_001290830, intron 4 of 26)	B3|SINE|B2	4020	NM_001290830	27223	Mm.215389	NM_013735	ENSMUSG00000043909	Trp53bp1	53BP1|Tp53bp1|m53BP1|p53BP1	transformation related protein 53 binding protein 1	protein-coding
unique_peak1-3326-11-3-1.50869358425161-1.95434855131066	chr18	82911917	82912562	+	0	NA	Intergenic	Intergenic	16192	NR_045389	76961	Mm.396392	NR_045389		2210420H20Rik	-	RIKEN cDNA 2210420H20 gene	ncRNA
common_peak2-27463-14-19--0.422711934529718-0.403453972741636	chr3	90594930	90595685	+	0	NA	Intergenic	L1_Mm|LINE|L1	64479	NM_207263	384997	Mm.316644	NM_207263	ENSMUSG00000042250	Pglyrp4	Gm1478|Gm413	peptidoglycan recognition protein 4	protein-coding
unique_peak2-39195-9-9--0.132314688483142-1.03275496310833	chr8	104385057	104385536	+	0	NA	Intergenic	Intergenic	923715	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
unique_peak1-6922-15-4-1.69023665566829-1.97518968347063	chr8	106584754	106585573	+	0	NA	Intergenic	MTD|LTR|MaLR	-40362	NM_009868	12562	Mm.21767	NM_009868	ENSMUSG00000031871	Cdh5	7B4|AA408225|Cd144|VE-Cad|VECD|VEcad|Vec	cadherin 5	protein-coding
common_peak1-9307-8-5-0.420259917226415-1.10484139239135	chr11	94158263	94158781	+	0	NA	intron (NM_026313, intron 7 of 10)	ID4|SINE|ID	24703	NM_026313	67684	Mm.30927	NM_026313	ENSMUSG00000020863	Luc7l3	3300001P08Rik|Luc7a	LUC7-like 3 (S. cerevisiae)	protein-coding
common_peak1-10400-11-12--0.191746133889479-0.310474156842889	chr13	97241259	97241824	+	0	NA	promoter-TSS (NM_001042714)	promoter-TSS (NM_001042714)	-426	NM_001042714	271144	Mm.470057	NM_001042714	ENSMUSG00000047117	Ankdd1b	9330128J19Rik	ankyrin repeat and death domain containing 1B	protein-coding
common_peak1-10668-8-12--0.695217300193522-0.475924844171029	chr14	51984654	51985146	+	0	NA	Intergenic	Intergenic	-19736	NR_045736	75377	Mm.402100	NR_045736		4930597G03Rik	-	RIKEN cDNA 4930597G03 gene	ncRNA
unique_peak1-1902-11-1-2.50869358425161-2.83420869758413	chr14	67663876	67664491	+	0	NA	intron (NM_001205188, intron 2 of 9)	L1MC3|LINE|L1	27125	NM_028032	71978	Mm.273997	NM_028032	ENSMUSG00000022052	Ppp2r2a	2410004D02Rik|mKIAA1541	protein phosphatase 2, regulatory subunit B, alpha	protein-coding
unique_peak2-32596-6-7--0.434601889619698-0.97990265578305	chr1	90923861	90924292	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	11388	NR_040471	73475	Mm.491040	NR_040471		1700067G17Rik	-	RIKEN cDNA 1700067G17 gene	ncRNA
common_peak2-30666-14-28--0.958764834769927-1.16796998271031	chr7	101896712	101897418	+	0	NA	Intergenic	Intergenic	-1462082	NM_011858	23966	Mm.254610	NM_011858	ENSMUSG00000048078	Tenm4	Doc4|ELM2|Odz4|R75022|Ten-m4|l(7)-3Rn|l7Rn3|mKIAA1302	teneurin transmembrane protein 4	protein-coding
common_peak1-9657-25-16-0.774387064094767-1.1282783422172	chr12	112999930	113000915	+	0	NA	intron (NM_001025360, intron 1 of 15)	intron (NM_001025360, intron 1 of 15)	3343	NM_001025361	16593	Mm.278357	NM_008450	ENSMUSG00000021288	Klc1	AI874768|Kns2	kinesin light chain 1	protein-coding
common_peak1-10655-24-11-1.20824740204656-1.9654245668484	chr14	47567615	47568491	+	0	NA	intron (NM_028966, intron 2 of 11)	MIR|SINE|MIR	-52962	NM_001163433	74480	Mm.214454	NM_028966	ENSMUSG00000021838	Samd4	1700024G08Rik|1700111L17Rik|4933436G17Rik|Samd4a|Smaug|Smaug1	sterile alpha motif domain containing 4	protein-coding
common_peak1-18401-20-8-1.31814978314888-1.77631109801764	chr8	71881778	71882622	+	0	NA	Intergenic	L1Md_F|LINE|L1	37243	NR_038044	378466	Mm.37846	NM_194351		Gm10033	9330175B10Rik|ENSMUSG00000057924|ENSMUSG00000071083|Gm10311	predicted gene 10033	ncRNA
common_peak2-30109-17-12-0.517856620063946-0.647240723060192	chr6	135321536	135322143	+	0	NA	intron (NM_001288627, intron 1 of 4)	intron (NM_001288627, intron 1 of 4)	4328	NM_001288627	13730	Mm.182785	NM_010128	ENSMUSG00000030208	Emp1	I-8-09|TMP	epithelial membrane protein 1	protein-coding
common_peak1-8991-25-64--1.16051790768335-3.23296565093675	chr11	59662357	59663370	+	0	NA	intron (NM_134029, intron 1 of 4)	intron (NM_134029, intron 1 of 4)	1288	NM_134029	103850	Mm.41761	NM_134029	ENSMUSG00000032615	Nt5m	2010013E09Rik|AI846937|dNT-2	5',3'-nucleotidase, mitochondrial	protein-coding
common_peak1-9460-20-23--0.0968877161299631-0.305855887145851	chr11	103386766	103387763	+	0	NA	Intergenic	RLTR15|LTR|ERVK	88789	NM_001033434	380730	Mm.380214	NM_001033434	ENSMUSG00000034239	Gm884	LRRC37	predicted gene 884	protein-coding
unique_peak1-2354-20-6-1.68071986253359-2.41165147706372	chr15	85935647	85936447	+	0	NA	intron (NM_172611, intron 3 of 18)	intron (NM_172611, intron 3 of 18)	46890	NM_001205353	223752	Mm.24442	NM_172611	ENSMUSG00000035900	Gramd4	9930016O13	GRAM domain containing 4	protein-coding
common_peak2-21797-8-8--0.164702583494742-1.00793137938329	chr11	118348276	118348802	+	0	NA	exon (NM_172573, exon 14 of 14)	exon (NM_172573, exon 14 of 14)	10265	NM_172573	217364	Mm.473963	NM_172573	ENSMUSG00000033857	Engase	C130099A03|D230014K01Rik	endo-beta-N-acetylglucosaminidase	protein-coding
unique_peak1-288-9-7-0.18961340640422-1.05908390183068	chr1	119492335	119493038	+	0	NA	Intergenic	(TATATG)n|Simple_repeat|Simple_repeat	715023	NM_011650	22099	Mm.426637	NM_011650	ENSMUSG00000026374	Tsn	2610034C24Rik|AU040286|C3PO|TB-RBP	translin	protein-coding
common_peak2-21024-6-7--0.434601889619698-0.97990265578305	chr11	31808016	31808392	+	0	NA	intron (NM_001290678, intron 2 of 7)	intron (NM_001290678, intron 2 of 7)	37264	NM_026252	67579	Mm.339792	NM_026252	ENSMUSG00000020300	Cpeb4	Cpe-bp4|Cpeb-4|mCPEB-4	cytoplasmic polyadenylation element binding protein 4	protein-coding
common_peak1-10200-46-44-0.406142846919127-0.83767504605574	chr13	46668888	46670364	+	0	NA	intron (NM_026056, intron 4 of 12)	intron (NM_026056, intron 4 of 12)	72354	NM_026056	67252	Mm.44529	NM_026056	ENSMUSG00000021373	Cap2	2810452G09Rik|AV045235	CAP, adenylate cyclase-associated protein, 2 (yeast)	protein-coding
common_peak1-9404-10-13--0.450939577048835-0.386243247519795	chr11	100737440	100737955	+	0	NA	intron (NM_011488, intron 10 of 19)	intron (NM_011488, intron 10 of 19)	15899	NM_001164062	20850	Mm.277403	NM_011488	ENSMUSG00000004043	Stat5a	AA959963|STAT5	signal transducer and activator of transcription 5A	protein-coding
unique_peak2-32737-8-15--0.994777582052429-0.771068449301683	chr1	164457479	164458170	+	0	NA	Intergenic	L1M2|LINE|L1	20652	NM_144877	71449	Mm.270569	NM_144877		Mettl13	5630401D24Rik	methyltransferase like 13	protein-coding
unique_peak2-36688-2-65--4.96184837562177-16.5644560973089	chr3	34652518	34654396	+	0	NA	Intergenic	Intergenic	-17540	NR_110488	102638436	Mm.261793	NR_110488		Peril	-	Peril transcript	ncRNA
unique_peak2-32879-19-32--0.641706792696767-0.800403172662453	chr10	9674630	9676119	+	0	NA	Intergenic	Intergenic	-54536	NM_001081344	78808	Mm.331751	NM_030191	ENSMUSG00000019790	Stxbp5	0710001E20Rik|4930565N16Rik|AW742610|LGL3|mKIAA1006	syntaxin binding protein 5 (tomosyn)	protein-coding
unique_peak2-33489-1-15--3.62705701021674-3.91338994363176	chr11	70646539	70647009	+	0	NA	Intergenic	ORR1C1|LTR|MaLR	-11489	NM_001291143	54189	Mm.7087	NM_019400	ENSMUSG00000020817	Rabep1	Rab5ep|rabaptin-5|rabaptin-5alpha	rabaptin, RAB GTPase binding effector protein 1	protein-coding
common_peak1-11936-28-18-0.805031606377877-1.27334590136207	chr17	88440711	88441587	+	0	NA	intron (NM_001081034, intron 1 of 22)	B1F|SINE|Alu	23476	NM_001081034	225055	Mm.386857	NM_001081034	ENSMUSG00000005371	Fbxo11	C80048|Jf	F-box protein 11	protein-coding
unique_peak2-39761-6-17--1.60452689106201-1.49151883326343	chrX	141475541	141476304	+	0	NA	intron (NM_001033795, intron 2 of 6)	L1_Mus3|LINE|L1	307515	NM_178358	237091	Mm.135547	NM_178358	ENSMUSG00000041700	Lhfpl1	Lhfp	lipoma HMGIC fusion partner-like 1	protein-coding
common_peak2-26554-20-19-0.16614668970383-0.348739088570342	chr2	94437539	94438185	+	0	NA	Intergenic	Lx3A|LINE|L1	-159558	NM_007466	11800	Mm.181824	NM_007466	ENSMUSG00000027193	Api5	AAC-11|AI196452	apoptosis inhibitor 5	protein-coding
unique_peak2-34317-9-12--0.510826311736872-0.394412252720706	chr13	95640747	95641445	+	0	NA	Intergenic	Intergenic	-4486	NM_011021	18420	Mm.42051	NM_011021		Otp	-	orthopedia homolog (Drosophila)	protein-coding
unique_peak1-4728-19-2-2.81772482594053-4.27364484827118	chr3	106789627	106790538	+	0	NA	Intergenic	Intergenic	-48998	NM_008418	16491	Mm.30640	NM_008418	ENSMUSG00000047959	Kcna3	Kca1-3|Kv1.3|Mk-3	potassium voltage-gated channel, shaker-related subfamily, member 3	protein-coding
common_peak1-13952-31-16-1.13777582956278-2.15838218998676	chr2	91194359	91195391	+	0	NA	intron (NM_175123, intron 3 of 8)	B4A|SINE|B4	89603	NM_023854	77038	Mm.43636	NM_023854	ENSMUSG00000027255	Arfgap2	2310032E02Rik|Zfp289	ADP-ribosylation factor GTPase activating protein 2	protein-coding
common_peak2-31996-6-18--1.68252940306328-1.66449268468235	chr9	70835127	70835758	+	0	NA	Intergenic	Intergenic	-52827	NM_008280	15450	Mm.390187	NM_008280	ENSMUSG00000032207	Lipc	AI256194|HL|Hpl	lipase, hepatic	protein-coding
common_peak1-8905-9-18--1.05831410703937-0.965105923112245	chr11	50275211	50275727	+	0	NA	Intergenic	MLT1D|LTR|MaLR	-30856	NM_172557	216724	Mm.390400	NM_172557	ENSMUSG00000020375	Rufy1	3000002E04Rik|Rabip4|ZFYVE12	RUN and FYVE domain containing 1	protein-coding
common_peak2-22669-13-10-0.319040412000471-0.446472590016315	chr13	96963174	96963779	+	0	NA	Intergenic	ORR1C1|LTR|MaLR	-60944	NM_029210	75209	Mm.40436	NM_029210	ENSMUSG00000051111	Sv2c	4930527L09Rik|AI841971	synaptic vesicle glycoprotein 2c	protein-coding
unique_peak1-5232-9-3-1.18961340640422-1.57096726280955	chr5	42155159	42155541	+	0	NA	5' UTR (NM_007524, exon 1 of 2)	5' UTR (NM_007524, exon 1 of 2)	109	NM_007524	12020	Mm.2530	NM_007524	ENSMUSG00000049691	Nkx3-2	Bapx1|NKX3.2|Nkx-3.2	NK3 homeobox 2	protein-coding
common_peak2-32068-32-51--0.421347698921432-0.649502410911277	chr9	92457319	92458316	+	0	NA	intron (NM_001142916, intron 1 of 19)	intron (NM_001142916, intron 1 of 19)	-20110	NR_029474	78575	Mm.407669	NR_029474		B430319G15Rik	D530025C14Rik	RIKEN cDNA B430319G15 gene	ncRNA
common_peak2-25410-26-25-0.22745937401737-0.399869693390336	chr19	42090471	42091269	+	0	NA	intron (NM_145500, intron 1 of 2)	intron (NM_145500, intron 1 of 2)	-19658	NM_020033	56642	Mm.143737	NM_020033	ENSMUSG00000025172	Ankrd2	Arpp|mArpp	ankyrin repeat domain 2 (stretch responsive muscle)	protein-coding
unique_peak1-7329-8-5-0.420259917226415-1.10484139239135	chr9	122309348	122309773	+	0	NA	Intergenic	Intergenic	-1641	NR_045967	654800	Mm.393956	NR_045967		A730085K08Rik	-	RIKEN cDNA A730085K08 gene	ncRNA
common_peak1-11367-9-7-0.18961340640422-1.05908390183068	chr15	94543171	94543638	+	0	NA	intron (NM_178789, intron 2 of 7)	B3A|SINE|B2	83788	NM_178789	320709	Mm.74873	NM_178789	ENSMUSG00000063296	Tmem117	B930062P21Rik	transmembrane protein 117	protein-coding
common_peak1-12034-77-113--0.0483634346087438-0.309794050023144	chr17	17624418	17625918	+	0	NA	Intergenic	Intergenic	85518	NM_025681	66643	Mm.268018	NM_025681	ENSMUSG00000047786	Lix1	5730466L18Rik	limb expression 1 homolog (chicken)	protein-coding
common_peak2-29797-9-11--0.395349094316936-0.344532117358383	chr6	90995738	90996193	+	0	NA	intron (NM_018815, intron 20 of 39)	intron (NM_018815, intron 20 of 39)	70855	NM_018815	54563	Mm.28162	NM_018815	ENSMUSG00000030091	Nup210	9830001L10|AI836801|Pom210|gp190|gp210	nucleoporin 210	protein-coding
common_peak2-20599-10-14--0.550475250599749-0.446472590016315	chr10	79853026	79853606	+	0	NA	Intergenic	Intergenic	-2920	NM_198615	237400	Mm.268389	NM_198615	ENSMUSG00000048696	Mex3d	BC059858|Rkhd1	mex3 homolog D (C. elegans)	protein-coding
common_peak2-26356-15-16--0.075298090694683-0.301029995663976	chr2	37702652	37703318	+	0	NA	intron (NM_146122, intron 18 of 21)	intron (NM_146122, intron 18 of 21)	71216	NM_001163566	241324	Mm.392369	NM_001163566	ENSMUSG00000035403	Crb2	5930402A21|BC043114	crumbs homolog 2 (Drosophila)	protein-coding
common_peak2-28579-8-10--0.454209200689727-1.078512453669	chr5	12220414	12220896	+	0	NA	Intergenic	RMER17C|LTR|ERVK	-162511	NM_028882	108151	Mm.89313	NM_028882	ENSMUSG00000040254	Sema3d	4631426B19Rik	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D	protein-coding
common_peak2-21004-17-24--0.425559851569687-0.427564438475253	chr11	23894477	23895341	+	0	NA	Intergenic	MIR|SINE|MIR	-83147	NM_016707	14025	Mm.53687	NM_016707	ENSMUSG00000000861	Bcl11a	2810047E18Rik|BCL-11A|Ctip1|D930021L15Rik|Evi9|Evi9a|Evi9b|Evi9c|mKIAA1809	B cell CLL/lymphoma 11A (zinc finger protein)	protein-coding
common_peak1-9789-27-19-0.669617856007873-1.02859851787301	chr12	59095467	59096062	+	0	NA	Intergenic	Intergenic	-217027	NM_009216	20605	Mm.278336	NM_009216		Sstr1	SRIF-2|SS-1-R|SS1-R|SS1R|Smstr-1|Smstr1|sst1	somatostatin receptor 1	protein-coding
common_peak2-28559-10-19--0.965512749878593-0.917676348953458	chr5	5360329	5360848	+	0	NA	intron (NM_011074, intron 2 of 14)	intron (NM_011074, intron 2 of 14)	19663	NM_011074	18647	Mm.389061	NM_011074	ENSMUSG00000028926	Cdk14	Pftk1|mKIAA0834	cyclin-dependent kinase 14	protein-coding
unique_peak2-39579-11-19--0.813234510635749-0.769930178837768	chr9	75558828	75559689	+	0	NA	Intergenic	MMERVK10C-int|LTR|ERVK	-27395	NM_009130	20255	Mm.2386	NM_009130	ENSMUSG00000032181	Scg3	1B1075|AI385542|Chgd|SgIII	secretogranin III	protein-coding
unique_peak2-37704-3-7--1.41398308995928-1.23214870625617	chr5	103436059	103436419	+	0	NA	intron (NM_001081567, intron 4 of 13)	L1_Mus1|LINE|L1	204114	NM_001081567	26414	Mm.39253	NM_009158	ENSMUSG00000046709	Mapk10	C230008H04Rik|JNK3|JNK3B1|JNK3B2|SAPK(beta)|Serk2|p493F12|p54bSAPK	mitogen-activated protein kinase 10	protein-coding
common_peak2-24608-13-38--1.50693018822448-2.79998507211557	chr17	33628964	33629513	+	0	NA	Intergenic	B4|SINE|B4	-31903	NR_037707	224697	Mm.29304	NM_172619	ENSMUSG00000024299	Adamts10	9430006O18|AW045948|Adam-ts10|Adamts-10|Znmp	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 10	protein-coding
common_peak2-28785-16-16-0.0308008010177225-0.307611222530525	chr5	63827530	63828147	+	0	NA	Intergenic	ORR1C1|LTR|MaLR	-212504	NM_177006	319807	Mm.319487	NM_028470	ENSMUSG00000090061	Nwd2	3110047P20Rik|B830017A01Rik|Hn1-ps2|mKIAA1239	NACHT and WD repeat domain containing 2	protein-coding
common_peak1-13810-41-91--0.822413251208353-2.64020658833855	chr2	50295969	50296946	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	144127	NR_040362	100502624	Mm.382825	NR_040361		Gm13483	OTTMUSG00000012382	predicted gene 13483	ncRNA
common_peak1-14718-25-21-0.402418286707809-0.580176690544129	chr3	79559130	79560478	+	0	NA	Intergenic	MTEa-int|LTR|MaLR	-18088	NM_212452	381489	Mm.331086	NM_212452		Rxfp1	Gm1018|Lgr7	relaxin/insulin-like family peptide receptor 1	protein-coding
common_peak1-15462-10-8-0.186490343566457-1.078512453669	chr4	103113835	103114323	+	0	NA	intron (NR_040673, intron 3 of 3)	intron (NR_040673, intron 3 of 3)	58974	NR_040673	622167	Mm.244115	NR_040673	ENSMUSG00000086136	Gm12718	OTTMUSG00000008109	predicted gene 12718	ncRNA
common_peak2-20831-18-28--0.54506184389922-0.591915184368642	chr10	128821737	128822525	+	0	NA	Intergenic	Intergenic	-2560	NM_146729	258724	Mm.377657	NM_146729	ENSMUSG00000094347	Olfr784	MOR110-3	olfactory receptor 784	protein-coding
common_peak2-30897-39-30-0.661564936532279-1.30310500416066	chr7	142434368	142435402	+	0	NA	Intergenic	Intergenic	-25417	NM_001163611	100043254	Mm.192092	NM_001163611	ENSMUSG00000073804	Nps	ENSMUSG00000073804	neuropeptide S	protein-coding
common_peak2-32313-25-35--0.308075096097206-0.423354874519378	chrX	57053089	57053886	+	0	NA	Intergenic	Intergenic	-199154	NM_007979	14071	Mm.391283	NM_007979	ENSMUSG00000031138	F9	AW111646|Cf-9|Cf9	coagulation factor IX	protein-coding
unique_peak1-1477-14-4-1.57728806547028-2.4322161449009	chr12	112578821	112579398	+	0	NA	intron (NM_183016, intron 3 of 36)	MTD|LTR|MaLR	36820	NM_183016	217866	Mm.27397	NM_183016	ENSMUSG00000021279	Cdc42bpb	MRCKb	CDC42 binding protein kinase beta	protein-coding
unique_peak1-7197-7-0-2.79909083029819-2.40823996531185	chr9	64175495	64175724	+	0	NA	intron (NM_001001295, intron 4 of 16)	MIR|SINE|MIR	12655	NM_172519	213550	Mm.268341	NM_172519	ENSMUSG00000032396	Dis3l	AV340375	DIS3 mitotic control homolog (S. cerevisiae)-like	protein-coding
unique_peak2-37781-1-5--2.2120195109379-1.32905871926422	chr5	117409988	117410290	+	0	NA	Intergenic	LTR16A|LTR|ERVL	155863	NM_001122666	71954	Mm.34456	NM_178622	ENSMUSG00000066900	Suds3	2400003N08Rik|2410008L21Rik|AU067672|mSds3	suppressor of defective silencing 3 homolog (S. cerevisiae)	protein-coding
common_peak1-12660-14-15--0.100783839642355-0.301029995663982	chr18	36408765	36409339	+	0	NA	Intergenic	B1F1|SINE|Alu	-31764	NM_008989	19290	Mm.231802	NM_008989		Pura	CAGER-1|Pur-alpha|ssCRE-BP	purine rich element binding protein A	protein-coding
common_peak2-27290-63-125--0.538967332429327-1.78811316335958	chr3	58576399	58577425	+	0	NA	intron (NR_045167, intron 7 of 7)	intron (NR_045167, intron 7 of 7)	80401	NR_045167	71301	Mm.254475	NR_045167	ENSMUSG00000097725	4930593A02Rik	4933440I01Rik	RIKEN cDNA 4930593A02 gene	ncRNA
common_peak1-13343-78-70-0.657073974655852-2.42477793328327	chr19	44247195	44249832	+	0	NA	intron (NM_181422, intron 2 of 14)	intron (NM_181422, intron 2 of 14)	18419	NM_181422	329064	Mm.308481	NM_181422	ENSMUSG00000037578	Pkd2l1	B830002B15|BC046386|PCL|PKD2L|Pkdl|TRPP3	polycystic kidney disease 2-like 1	protein-coding
common_peak1-16261-122-179-0.0897992606323132-0.399966376301412	chr5	106695447	106697166	+	0	NA	Intergenic	Intergenic	190879	NM_001005477	104382	Mm.271593	NM_001005477	ENSMUSG00000034384	Barhl2	E130309B19Rik|MBH1	BarH-like 2 (Drosophila)	protein-coding
common_peak2-28249-43-68--0.325961271254466-0.599944741495252	chr4	124850025	124851446	+	0	NA	Intergenic	Intergenic	-45610	NM_153159	230738	Mm.402	NM_153159	ENSMUSG00000042677	Zc3h12a	BC036563|MCPIP|Mcpip1	zinc finger CCCH type containing 12A	protein-coding
common_peak1-13751-36-55--0.328033835889849-0.518540604135986	chr2	32966352	32967679	+	0	NA	Intergenic	Intergenic	-24291	NM_178888	99326	Mm.41290	NM_178888	ENSMUSG00000038860	Garnl3	AW120551	GTPase activating RANGAP domain-like 3	protein-coding
common_peak1-17461-10-10--0.103016273628528-0.301029995663987	chr7	19308110	19308678	+	0	NA	exon (NM_001004152, exon 3 of 5)	exon (NM_001004152, exon 3 of 5)	4955	NM_001004152	243862	Mm.389833	NM_001004152	ENSMUSG00000044903	Psg22	AA408604|cea9	pregnancy-specific glycoprotein 22	protein-coding
common_peak2-28996-40-50--0.013449659220397-0.303180003474857	chr5	108131688	108132702	+	0	NA	intron (NR_045871, intron 1 of 2)	intron (NR_045871, intron 1 of 2)	304	NR_045871	654809	Mm.399159	NR_045871		4930428O21Rik	-	RIKEN cDNA 4930428O21 gene	ncRNA
unique_peak1-5783-11-5-0.923731083530457-1.477227296591	chr6	54364828	54365401	+	0	NA	intron (NR_033635, intron 1 of 13)	intron (NR_033635, intron 1 of 13)	15101	NR_033635	100042056	Mm.448157	NM_198118	ENSMUSG00000073067	9130019P16Rik	6430501H15Rik|OTTMUSG00000023151	RIKEN cDNA 9130019P16 gene	ncRNA
common_peak2-25180-29-52--0.615630373948088-1.02702006187975	chr18	56706936	56708425	+	0	NA	intron (NM_138600, intron 6 of 17)	(GAAA)n|Simple_repeat|Simple_repeat	9887	NR_106160	102465790		NR_106160	miRBase:MI0025040	Mir1258	mmu-mir-1258	microRNA mir-1258	ncRNA
unique_peak1-5155-14-3-1.89921616035764-2.80787975886178	chr5	24047492	24048141	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-1550	NM_080444	117590	Mm.207071	NM_080444	ENSMUSG00000038204	Asb10	Asb-10|BB137407	ankyrin repeat and SOCS box-containing 10	protein-coding
common_peak2-32186-17-10-0.75886471956774-0.917676348953458	chr9	116232149	116232804	+	0	NA	Intergenic	Intergenic	-147995	NM_009371	21813	Mm.172346	NM_009371	ENSMUSG00000032440	Tgfbr2	1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII	transforming growth factor, beta receptor II	protein-coding
unique_peak2-34107-6-12--1.13504160776079-1.45089835786865	chr13	16760893	16761594	+	0	NA	Intergenic	Intergenic	654935	NM_008380	16323	Mm.8042	NM_008380	ENSMUSG00000041324	Inhba	-	inhibin beta-A	protein-coding
common_peak1-16937-48-39-0.648999056347452-1.53884632328361	chr6	83165302	83166434	+	0	NA	Intergenic	Intergenic	-21501	NM_001166067	232156	Mm.333189	NM_001166067	ENSMUSG00000068323	Slc4a5	C330006M16|C330016K18Rik	solute carrier family 4, sodium bicarbonate cotransporter, member 5	protein-coding
common_peak2-21817-19-14-0.495796731053168-0.607095980551316	chr11	119267958	119268449	+	0	NA	Intergenic	Intergenic	16417	NR_035453	100316690		NR_035453	miRBase:MI0009921	Mir1932	mmu-mir-1932	microRNA 1932	ncRNA
unique_peak2-34373-7-13--1.00826409175941-0.697979855752659	chr13	112800860	112801476	+	0	NA	Intergenic	Intergenic	-201977	NM_011945	26401	Mm.15918	NM_011945	ENSMUSG00000021754	Map3k1	MAPKKK1|MEKK1|Mekk	mitogen-activated protein kinase kinase kinase 1	protein-coding
common_peak2-21207-19-35--0.767237674780626-1.06916698217164	chr11	61578700	61579770	+	0	NA	Intergenic	Intergenic	-3645	NM_001164243	212627	Mm.27703	NM_144806	ENSMUSG00000020528	Prpsap2	A230054F23Rik	phosphoribosyl pyrophosphate synthetase-associated protein 2	protein-coding
common_peak2-30920-4-6--0.830815435910851-0.989110657569874	chr7	144775084	144775447	+	0	NA	Intergenic	Intergenic	145908	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
unique_peak2-35093-6-6--0.241956811677302-0.947717972411649	chr16	20371840	20372273	+	0	NA	intron (NM_013790, intron 17 of 29)	intron (NM_013790, intron 17 of 29)	-46579	NM_183158	224044	Mm.276400	NM_183158	ENSMUSG00000022818	Cyp2ab1	EG224044|F730023N20	cytochrome P450, family 2, subfamily ab, polypeptide 1	protein-coding
common_peak1-14216-44-21-1.36246121593124-4.04946261034137	chr2	151530677	151532443	+	0	NA	intron (NM_001160363, intron 1 of 1)	intron (NM_001160363, intron 1 of 1)	3816	NM_001160363	108832	Mm.103494	NM_001160363	ENSMUSG00000044364	Tmem74b	5430405G05Rik	transmembrane protein 74B	protein-coding
unique_peak1-306-11-3-1.50869358425161-1.95434855131066	chr1	127796690	127797256	+	0	NA	intron (NM_145100, intron 2 of 2)	L1MB7|LINE|L1	11818	NM_145100	72585	Mm.490405	NM_145100		Lypd1	2700050C12Rik|AI853408|C530008O16Rik|Lynx2|Lypdc1	Ly6/Plaur domain containing 1	protein-coding
unique_peak2-36146-1-6--2.43441193227435-1.56314192529759	chr2	19879306	19879702	+	0	NA	Intergenic	L1Md_T|LINE|L1	299815	NM_027715	71198	Mm.83981	NM_027715	ENSMUSG00000043415	Otud1	4933428L19Rik	OTU domain containing 1	protein-coding
unique_peak2-38262-3-6--1.22133801201688-1.08602067057793	chr6	125417773	125418053	+	0	NA	intron (NM_007657, intron 2 of 7)	intron (NM_007657, intron 2 of 7)	26860	NM_007657	12527	Mm.210676	NM_007657	ENSMUSG00000030342	Cd9	Tspan29	CD9 antigen	protein-coding
common_peak2-21607-12-24--0.995080204687086-1.0220094258199	chr11	99580548	99581090	+	0	NA	Intergenic	Intergenic	53408	NM_001126322	100040276	Mm.475095	NM_001126322	ENSMUSG00000078668	Gm11595	OTTMUSG00000002543	predicted gene 11595	protein-coding
unique_peak1-2552-9-0-3.18961340640422-3.01029995663981	chr16	23980790	23981397	+	0	NA	intron (NM_009744, intron 1 of 9)	intron (NM_009744, intron 1 of 9)	7605	NM_009744	12053	Mm.347398	NM_009744	ENSMUSG00000022508	Bcl6	Bcl5	B cell leukemia/lymphoma 6	protein-coding
unique_peak1-454-11-2-1.92373108353046-2.32232533660526	chr1	168383873	168384399	+	0	NA	Intergenic	L1Md_F2|LINE|L1	43583	NM_001164306	226601	Mm.475593	NM_001164306	ENSMUSG00000086056	Gm4846	EG226601|Fmo13	predicted gene 4846	protein-coding
unique_peak2-38776-5-25--2.40482005414695-3.46164246247458	chr7	127708211	127708861	+	0	NA	Intergenic	B1F1|SINE|Alu	-32603	NR_024324	78552	Mm.289190	NR_024324		E130201H02Rik	-	Y box protein 1 pseudogene	pseudo
unique_peak1-3317-7-1-1.79909083029819-1.80617997398389	chr18	80654946	80655359	+	0	NA	intron (NM_026295, intron 4 of 12)	intron (NM_026295, intron 4 of 12)	11254	NM_026295	67655	Mm.312893	NM_026295	ENSMUSG00000033323	Ctdp1	4930563P03Rik|AW553592	CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1	protein-coding
common_peak2-23970-25-38--0.423552313517143-0.564346534703877	chr16	17233563	17234284	+	0	NA	intron (NM_178922, intron 1 of 2)	CpG	243	NM_178922	58180	Mm.261602	NM_178922	ENSMUSG00000050240	Hic2	AA409108|HRG22|mKIAA1020	hypermethylated in cancer 2	protein-coding
common_peak1-19490-70-63-0.619966916375398-1.96650328987728	chrX	152232715	152234007	+	0	NA	Intergenic	Intergenic	-175491	NM_001093750	211612	Mm.218811	NM_001093750		Ptchd1	9630036J22Rik|AI848149|Gm387	patched domain containing 1	protein-coding
common_peak2-26872-109-144-0.206250591872267-0.670727203178111	chr2	156179314	156180304	+	0	NA	intron (NM_027585, intron 9 of 12)	intron (NM_027585, intron 9 of 12)	38906	NR_024329	347740	Mm.324242	NR_024329		2900097C17Rik	1810005K14Rik|4930563C06Rik	RIKEN cDNA 2900097C17 gene	ncRNA
common_peak2-30490-27-44--0.500307145434439-0.714193724415661	chr7	58657836	58658729	+	0	NA	Intergenic	Intergenic	-108117	NR_073508	233246	Mm.254431	NM_177694	ENSMUSG00000055489	Ano5	9330162L24|Gdd1|Tmem16e	anoctamin 5	protein-coding
common_peak2-23513-4-5--0.608423014574403-0.909929411522249	chr15	76657096	76657505	+	0	NA	Intergenic	Intergenic	-8700	NM_198420	223666	Mm.322931	NM_198420	ENSMUSG00000033697	Arhgap39	9530053N22|AI843066|D15Wsu169e|Kiaa1688|Porf-2	Rho GTPase activating protein 39	protein-coding
common_peak2-26803-10-9-0.0344872501214071-1.05503135781948	chr2	150136265	150136738	+	0	NA	TTS (NM_027017)	TTS (NM_027017)	52000	NM_027017	69277	Mm.272470	NM_027017	ENSMUSG00000063364	3300002I08Rik	2900016H11Rik	RIKEN cDNA 3300002I08 gene	protein-coding
common_peak2-20420-7-6--0.00826409175941478-0.97990265578305	chr10	26014072	26014573	+	0	NA	intron (NM_172787, intron 17 of 21)	L1Md_F3|LINE|L1	64809	NM_001115154	268288	Mm.213322	NM_001013766	ENSMUSG00000051354	Samd3	Gm623	sterile alpha motif domain containing 3	protein-coding
common_peak1-16664-15-20--0.380152672223105-0.397739447719386	chr6	135364498	135365222	+	0	NA	Intergenic	Intergenic	47349	NM_001288627	13730	Mm.182785	NM_010128	ENSMUSG00000030208	Emp1	I-8-09|TMP	epithelial membrane protein 1	protein-coding
common_peak2-23485-9-8-0.0196884049619079-1.03275496310833	chr15	74994946	74995411	+	0	NA	Intergenic	L1_Mm|LINE|L1	-52799	NM_001099217	100041546	Mm.482110	NM_001099217	ENSMUSG00000022584	Ly6c2	Ly-6C.2|Ly-6C2	lymphocyte antigen 6 complex, locus C2	protein-coding
unique_peak2-35523-7-8--0.370834171144123-1.00793137938329	chr17	50682509	50683031	+	0	NA	intron (NM_013880, intron 1 of 5)	MLT1G|LTR|MaLR	33898	NM_013880	224860	Mm.217362	NM_013880	ENSMUSG00000038910	Plcl2	PLC-L2|PRIP-2|Plce2|mKIAA1092	phospholipase C-like 2	protein-coding
common_peak1-13068-16-6-1.31090872021046-1.49151883326344	chr19	6276003	6276629	+	0	NA	promoter-TSS (NM_010119)	promoter-TSS (NM_010119)	-580	NM_010119	13660	Mm.30169	NM_010119	ENSMUSG00000024772	Ehd1	AA409636|Past1|RME-1	EH-domain containing 1	protein-coding
common_peak2-30198-12-8-0.478850983645327-0.562038191119709	chr7	49332138	49332701	+	0	NA	Intergenic	L1Md_F3|LINE|L1	-18068	NM_001105056	628444	Mm.469901	NM_001105056	ENSMUSG00000092032	Vmn2r59	EG628444	vomeronasal 2, receptor 59	protein-coding
unique_peak2-36281-6-9--0.75652998450706-1.11707584880836	chr2	68860888	68861352	+	0	NA	intron (NM_172856, intron 4 of 9)	intron (NM_172856, intron 4 of 9)	-112737	NM_181547	329416	Mm.90047	NM_181547	ENSMUSG00000034738	Nostrin	Daip2|mDaIP2	nitric oxide synthase trafficker	protein-coding
common_peak1-11284-26-51--0.77254062598263-1.49688973786043	chr15	83156812	83157850	+	0	NA	intron (NM_025445, intron 7 of 15)	ID4|SINE|ID	23346	NM_025445	66251	Mm.258910	NM_025445	ENSMUSG00000054277	Arfgap3	0610009H19Rik|1810004P07Rik|1810035F16Rik|9130416J18Rik|Arfgap1	ADP-ribosylation factor GTPase activating protein 3	protein-coding
common_peak2-21510-19-20-0.0103699038829257-0.306326795069978	chr11	94161023	94162090	+	0	NA	intron (NM_026313, intron 5 of 10)	L1ME1|LINE|L1	21669	NM_026313	67684	Mm.30927	NM_026313	ENSMUSG00000020863	Luc7l3	3300001P08Rik|Luc7a	LUC7-like 3 (S. cerevisiae)	protein-coding
common_peak2-29978-16-10-0.658832023630764-0.699649909729472	chr6	120192058	120192533	+	0	NA	intron (NM_198884, intron 1 of 19)	B3|SINE|B2	52282	NM_198884	330406	Mm.321840	NM_198884	ENSMUSG00000041372	B4galnt3	AB114826|B4GalNAcT3|C330047A21	beta-1,4-N-acetyl-galactosaminyl transferase 3	protein-coding
unique_peak2-36748-5-6--0.511735258063458-0.947717972411649	chr3	59296910	59297271	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-148912	NM_001162884	242050	Mm.228086	NM_001162884	ENSMUSG00000036334	Igsf10	6530405F15Rik|9030224D03|AA409708|AA536958|AI414626|Adlican2|CMF608	immunoglobulin superfamily, member 10	protein-coding
unique_peak1-6233-11-7-0.508693584251613-1.21681515183528	chr7	12922105	12922713	+	0	NA	Intergenic	L1Md_T|LINE|L1	-14932	NM_134209	171243	Mm.377199	NM_134209	ENSMUSG00000066804	Vmn1r83	V1rg8	vomeronasal 1 receptor 83	protein-coding
unique_peak2-35479-3-6--1.22133801201688-1.08602067057793	chr17	44737587	44738006	+	0	NA	intron (NR_073425, intron 5 of 5)	intron (NR_073425, intron 5 of 5)	135329	NR_073425	12393	Mm.391013	NM_009820	ENSMUSG00000039153	Runx2	AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a	runt related transcription factor 2	protein-coding
common_peak1-9791-7-6--0.00826409175941478-0.97990265578305	chr12	59206341	59206856	+	0	NA	Intergenic	Lx3_Mus|LINE|L1	-106193	NM_009216	20605	Mm.278336	NM_009216		Sstr1	SRIF-2|SS-1-R|SS1-R|SS1R|Smstr-1|Smstr1|sst1	somatostatin receptor 1	protein-coding
common_peak2-30635-26-33--0.159563749091877-0.332062764479297	chr7	98116346	98117507	+	0	NA	Intergenic	RSINE1|SINE|B4	-122370	NM_011807	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
common_peak2-22141-9-15--0.81038659359578-0.630231561310125	chr12	85973219	85973802	+	0	NA	Intergenic	Intergenic	-8459	NM_001168589	432677	Mm.311913	NM_001033776	ENSMUSG00000071235	Vrtn	7420416P09Rik	vertebrae development associated	protein-coding
common_peak1-10328-35-27-0.6240153364049-1.10223211335955	chr13	73802494	73803970	+	0	NA	intron (NM_001168646, intron 10 of 11)	intron (NM_001168646, intron 10 of 11)	12239	NM_001168646	22598	Mm.30370	NM_011730	ENSMUSG00000021612	Slc6a18	B0AT3|D630001K16Rik|Xt2|Xtrp2	solute carrier family 6 (neurotransmitter transporter), member 18	protein-coding
unique_peak1-531-8-0-3.00522241794757-2.70926996097583	chr1	185312023	185312511	+	0	NA	Intergenic	Intergenic	427348	NM_016928	53791	Mm.116894	NM_016928	ENSMUSG00000079164	Tlr5	-	toll-like receptor 5	protein-coding
unique_peak2-38896-6-9--0.75652998450706-1.11707584880836	chr8	10966002	10966375	+	0	NA	Intergenic	GA-rich|Low_complexity|Low_complexity	-37731	NR_030715	665306	Mm.358758	NR_030715	ENSMUSG00000038917	3930402G23Rik	-	RIKEN cDNA 3930402G23 gene	ncRNA
unique_peak2-37626-3-6--1.22133801201688-1.08602067057793	chr5	66475610	66475897	+	0	NA	intron (NM_178446, intron 2 of 6)	intron (NM_178446, intron 2 of 6)	13665	NM_139065	245945	Mm.36863	NM_139065	ENSMUSG00000070780	Rbm47	9530077J19Rik	RNA binding motif protein 47	protein-coding
common_peak1-17294-17-11-0.633333837483882-0.769930178837768	chr6	136828378	136828970	+	0	NA	Intergenic	Intergenic	-4348	NM_008597	17313	Mm.243085	NM_008597	ENSMUSG00000030218	Mgp	Mglap	matrix Gla protein	protein-coding
unique_peak2-36465-4-8--1.19338551529556-1.21878474469819	chr2	143904816	143905247	+	0	NA	Intergenic	Intergenic	46193	NM_207275	403171	Mm.389362	NM_207275	ENSMUSG00000037307	Banf2	4930517K23Rik|Baf-L|Baf-like|Gm115	barrier to autointegration factor 2	protein-coding
unique_peak2-32625-5-8--0.874305337448166-1.10484139239135	chr1	120121157	120121697	+	0	NA	Intergenic	L1_Mus1|LINE|L1	86282	NM_011650	22099	Mm.426637	NM_011650	ENSMUSG00000026374	Tsn	2610034C24Rik|AU040286|C3PO|TB-RBP	translin	protein-coding
unique_peak1-305-15-9-0.690236655668294-0.732381977911291	chr1	127755791	127756541	+	0	NA	intron (NM_027677, intron 1 of 1)	intron (NM_027677, intron 1 of 1)	52625	NM_145100	72585	Mm.490405	NM_145100		Lypd1	2700050C12Rik|AI853408|C530008O16Rik|Lynx2|Lypdc1	Ly6/Plaur domain containing 1	protein-coding
common_peak1-12912-11-8-0.338768582809301-1.14218153353838	chr18	84857786	84858302	+	0	NA	Intergenic	Intergenic	-2950	NM_023149	66054	Mm.29646	NM_023149	ENSMUSG00000024644	Cndp2	0610010E05Rik|C76600|Cn2|Dip-2|Pep-1|Pep1	CNDP dipeptidase 2 (metallopeptidase M20 family)	protein-coding
common_peak1-18061-74-86-0.272943081129879-0.712129232458725	chr8	4324177	4325950	+	0	NA	promoter-TSS (NM_010485)	promoter-TSS (NM_010485)	37	NM_010485	15568	Mm.119162	NM_010485	ENSMUSG00000040028	Elavl1	2410055N02Rik|HUR|Hua|W91709	ELAV (embryonic lethal, abnormal vision)-like 1 (Hu antigen R)	protein-coding
common_peak1-12341-11-16--0.578769256998726-0.503257505534083	chr17	55958901	55959463	+	0	NA	intron (NM_139138, intron 14 of 16)	Lx6|LINE|L1	59036	NM_144546	104349	Mm.460659	NM_144546		Zfp119a	AL024077|Mzf13|Zfp119	zinc finger protein 119a	protein-coding
common_peak1-11531-10-10--0.103016273628528-0.301029995663987	chr16	4419852	4420409	+	0	NA	5' UTR (NM_009624, exon 1 of 11)	5' UTR (NM_009624, exon 1 of 11)	368	NM_001291910	11515	Mm.439750	NM_009624	ENSMUSG00000005580	Adcy9	ACtp10|AW125421|D16Wsu65e|mKIAA0520	adenylate cyclase 9	protein-coding
common_peak2-28580-10-8-0.186490343566457-1.078512453669	chr5	12383476	12383943	+	0	NA	intron (NM_028882, intron 1 of 17)	intron (NM_028882, intron 1 of 17)	543	NM_028882	108151	Mm.89313	NM_028882	ENSMUSG00000040254	Sema3d	4631426B19Rik	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D	protein-coding
common_peak2-27967-30-24-0.525819219717149-0.825714541185123	chr4	41314236	41315404	+	0	NA	intron (NM_001290454, intron 2 of 5)	intron (NM_001290454, intron 2 of 5)	18791	NM_023305	67123	Mm.289795	NM_023305	ENSMUSG00000028437	Ubap1	2700092A01Rik|NAG20|UBAP-1|Ubap	ubiquitin-associated protein 1	protein-coding
common_peak2-28119-21-13-0.762134343208631-1.0220094258199	chr4	89123863	89124488	+	0	NA	Intergenic	Lx9|LINE|L1	-167234	NM_007670	12579	Mm.423094	NM_007670	ENSMUSG00000073802	Cdkn2b	AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b	cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)	protein-coding
unique_peak1-4698-11-7-0.508693584251613-1.21681515183528	chr3	98375413	98375926	+	0	NA	Intergenic	ETnERV2-int|LTR|ERVK	-7708	NM_008294	15495	Mm.14309	NM_008294	ENSMUSG00000095143	Hsd3b4	-	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 4	protein-coding
common_peak2-25165-17-15-0.218296338205038-0.403453972741633	chr18	53250135	53250861	+	0	NA	Intergenic	Intergenic	-85521	NM_026386	67804	Mm.252171	NM_026386	ENSMUSG00000034484	Snx2	0610030A03Rik	sorting nexin 2	protein-coding
common_peak2-30334-11-16--0.578769256998726-0.503257505534083	chr7	25267601	25267997	+	0	NA	intron (NM_153112, intron 1 of 8)	intron (NM_153112, intron 1 of 8)	757	NM_153112	260299	Mm.178322	NM_153112	ENSMUSG00000054793	Cadm4	Igdf4c|Igsf4c|Tsll2	cell adhesion molecule 4	protein-coding
common_peak2-30462-33-48--0.28337228158968-0.459173512026158	chr7	45717590	45718825	+	0	NA	Intergenic	Intergenic	801697	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak2-20500-24-59--1.1136806928408-2.7531582050792	chr10	59220897	59222012	+	0	NA	intron (NM_001291443, intron 6 of 12)	intron (NM_001291443, intron 6 of 12)	56143	NM_001291443	216001	Mm.27199	NM_144822	ENSMUSG00000020111	Micu1	C730016L05Rik|Calc|Cbara1	mitochondrial calcium uptake 1	protein-coding
unique_peak1-6600-26-1-3.92789909215846-7.71438499397482	chr7	145205871	145206893	+	0	NA	Intergenic	Intergenic	383031	NM_183289	70571	Mm.334297	NM_183289	ENSMUSG00000091002	Tcerg1l	5730476P14Rik	transcription elongation regulator 1-like	protein-coding
common_peak1-18169-40-58--0.223667366610743-0.398713855155094	chr8	13695507	13696898	+	0	NA	Intergenic	Intergenic	-9687	NM_001101519	403185	Mm.252143	NM_001101519	ENSMUSG00000090336	4932443I19Rik	A230061C02Rik|Gm1106	RIKEN cDNA 4932443I19 gene	protein-coding
unique_peak1-3889-9-1-2.18961340640422-2.31132995230379	chr2	18031508	18032000	+	0	NA	intron (NR_045538, intron 5 of 22)	intron (NR_045538, intron 5 of 22)	45542	NM_001252561	17354	Mm.209175	NM_010804	ENSMUSG00000026743	Mllt10	Af10|B130021D15Rik|D630001B22Rik|mKIAA4140	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	protein-coding
unique_peak1-4114-8-6-0.197867495889966-1.03789460276074	chr2	83743944	83744472	+	0	NA	Intergenic	Intergenic	37175	NM_027964	71861	Mm.116957	NM_027964	ENSMUSG00000034552	Zswim2	1700025P14Rik|4933437F18Rik|MEX	zinc finger SWIM-type containing 2	protein-coding
unique_peak1-3327-16-7-1.11826364226806-1.23399803405144	chr18	83816854	83817579	+	0	NA	Intergenic	Intergenic	-321940	NR_045361	70960	Mm.410834	NR_045361		4921531P14Rik	1700108N05Rik	RIKEN cDNA 4921531P14 gene	ncRNA
common_peak1-15911-17-14-0.311405742596519-0.466170754204149	chr5	23418099	23419108	+	0	NA	Intergenic	MTE-int|LTR|MaLR	60552	NR_028536	100217436		NR_028536		Snord93	Gm22397|MBII-336	small nucleolar RNA, C/D box 93	snoRNA
common_peak1-8256-8-12--0.695217300193522-0.475924844171029	chr10	20091624	20092154	+	0	NA	Intergenic	Intergenic	24264	NM_027930	71804	Mm.262151	NM_027930	ENSMUSG00000019992	Mtfr2	2610016C23Rik|4933412C16Rik|Dufd1|Fam54a	mitochondrial fission regulator 2	protein-coding
common_peak1-17853-16-16-0.0308008010177225-0.307611222530525	chr7	112534916	112535706	+	0	NA	intron (NM_001242363, intron 7 of 12)	MLT1D|LTR|MaLR	11699	NM_001195727	100503879	Mm.380109	NM_001195727	ENSMUSG00000078611	Gm5901	EG545989	predicted gene 5901	protein-coding
common_peak2-31054-9-8-0.0196884049619079-1.03275496310833	chr8	18951837	18952224	+	0	NA	Intergenic	Intergenic	-1055	NM_001113350	319581	Mm.111354	NM_176951	ENSMUSG00000039814	Xkr5	5430438H03Rik|XRG5	X Kell blood group precursor-related family, member 5	protein-coding
common_peak2-31116-12-5-1.06381348436648-1.78669045979184	chr8	33662553	33662951	+	0	NA	Intergenic	Intergenic	397746	NM_001177589	100042715	Mm.291093	NM_001177589		Gm3985	-	predicted gene 3985	protein-coding
common_peak1-13858-57-106--0.475433946322218-1.30317733785067	chr2	65237803	65239529	+	0	NA	Intergenic	RMER1A|Other|Other	-36209	NR_105755	102466151		NR_105755	miRBase:MI0021865	Mir6337	mmu-mir-6337	microRNA mir-6337	ncRNA
unique_peak1-7185-9-2-1.60465090568306-1.87199725847353	chr9	62857036	62857594	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-28629	NM_019663	56469	Mm.431253	NM_019663	ENSMUSG00000032405	Pias1	2900068C24Rik|Ddxbp1|GBP	protein inhibitor of activated STAT 1	protein-coding
common_peak1-12294-13-12-0.0780323124966764-0.334470287753051	chr17	46160971	46161600	+	0	NA	intron (NM_001287058, intron 4 of 5)	intron (NM_001287058, intron 4 of 5)	827	NM_001110267	22339	Mm.282184	NM_009505	ENSMUSG00000023951	Vegfa	Vegf|Vpf	vascular endothelial growth factor A	protein-coding
common_peak2-31268-64-95--0.119516099012553-0.359187433159323	chr8	71381426	71382904	+	0	NA	Intergenic	Intergenic	-22289	NM_008509	16956	Mm.1514	NM_008509	ENSMUSG00000015568	Lpl	-	lipoprotein lipase	protein-coding
common_peak2-28450-10-13--0.450939577048835-0.386243247519795	chr4	150707351	150708060	+	0	NA	intron (NM_001081557, intron 5 of 23)	intron (NM_001081557, intron 5 of 23)	-275643	NM_009498	22319	Mm.273930	NM_009498	ENSMUSG00000028955	Vamp3	D130027G05Rik|VAMP-3|ceb	vesicle-associated membrane protein 3	protein-coding
common_peak2-20244-16-9-0.796335547380699-0.844317084070804	chr1	183368917	183369411	+	0	NA	intron (NM_028408, intron 3 of 5)	(T)n|Simple_repeat|Simple_repeat	72418	NM_207280	403180	Mm.220754	NM_207280	ENSMUSG00000050625	Ccdc121	6530421E24Rik|Gm755	coiled-coil domain containing 121	protein-coding
common_peak1-16663-26-14-1.02100849654994-1.59386218057211	chr6	135167505	135168440	+	0	NA	intron (NM_028982, intron 4 of 12)	ID_B1|SINE|B4	19967	NM_028982	74525	Mm.34182	NM_028982	ENSMUSG00000030207	8430419L09Rik	Kiaa1467|mKIAA1467	RIKEN cDNA 8430419L09 gene	protein-coding
common_peak2-26295-23-21-0.262335885871783-0.416752705545949	chr2	31974472	31975015	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	23572	NM_145521	227721	Mm.257236	NM_145521	ENSMUSG00000051373	Ppapdc3	D830019K17Rik|NET39	phosphatidic acid phosphatase type 2 domain containing 3	protein-coding
common_peak2-27525-32-38--0.00631019964258872-0.303850168981672	chr3	95701063	95702392	+	0	NA	TTS (NM_011797)	TTS (NM_011797)	3883	NM_146134	226548	Mm.306954	NM_146104	ENSMUSG00000015750	Aph1a	6530402N02Rik|APH-1a	anterior pharynx defective 1a homolog (C. elegans)	protein-coding
common_peak1-9639-48-61-0.0167308408479396-0.308035049112922	chr12	54738270	54739362	+	0	NA	intron (NM_013780, intron 3 of 11)	intron (NM_013780, intron 3 of 11)	389152	NM_013780	27386	Mm.247044	NM_013780	ENSMUSG00000021010	Npas3	4930423H22Rik|bHLHe12	neuronal PAS domain protein 3	protein-coding
common_peak1-19045-13-29--1.12841856497075-1.46151065785802	chr9	65541645	65542169	+	0	NA	3' UTR (NM_172536, exon 10 of 10)	3' UTR (NM_172536, exon 10 of 10)	17552	NM_001301307	18247	Mm.116749	NM_010952	ENSMUSG00000040652	Oaz2	AZ-2|AZ2|Oaz2-ps|Sez15	ornithine decarboxylase antizyme 2	protein-coding
unique_peak1-6238-8-4-0.683294323060208-1.21878474469819	chr7	16403310	16403891	+	0	NA	Intergenic	IAPEY3-int|LTR|ERVK	21428	NM_145710	252830	Mm.25863	NM_145710	ENSMUSG00000041583	Obox6	D17Ertd599e	oocyte specific homeobox 6	protein-coding
common_peak2-25884-56-56-0.402705811274502-0.901543963465162	chr19	44283509	44285184	+	0	NA	intron (NM_024450, intron 1 of 5)	B1_Mur1|SINE|Alu	6568	NM_024450	30049	Mm.480594	NM_024450	ENSMUSG00000025202	Scd3	4930513N16Rik	stearoyl-coenzyme A desaturase 3	protein-coding
unique_peak2-38964-3-7--1.41398308995928-1.23214870625617	chr8	33899595	33899946	+	0	NA	Intergenic	MTD-int|LTR|MaLR	160728	NM_001177589	100042715	Mm.291093	NM_001177589		Gm3985	-	predicted gene 3985	protein-coding
unique_peak1-3337-11-1-2.50869358425161-2.83420869758413	chr18	88903817	88904358	+	0	NA	Intergenic	B2_Mm2|SINE|B2	159512	NM_018821	54607	Mm.91920	NM_018821	ENSMUSG00000056153	Socs6	1500012M23Rik|5830401B18Rik|AI447482|Cis4|Cish4|HSPC060|SOCS-4|SOCS-6|SSI4|STAI4|STATI4|Socs4	suppressor of cytokine signaling 6	protein-coding
common_peak1-18343-36-43-0.0198894675304571-0.310901174692144	chr8	68061762	68063010	+	0	NA	Intergenic	(TC)n|Simple_repeat|Simple_repeat	-79553	NM_001293784	72925	Mm.380457	NM_175188	ENSMUSG00000036469	March1	2900024D24Rik|BB085186	membrane-associated ring finger (C3HC4) 1	protein-coding
unique_peak2-36986-6-8--0.60452689106201-1.03789460276074	chr3	117862380	117862868	+	0	NA	Intergenic	Intergenic	-274151	NR_029551	387155		NR_029551		Mir137	Mirn137|mmu-mir-137	microRNA 137	ncRNA
common_peak2-28401-14-17--0.270708841084668-0.328191099940267	chr4	140648325	140649069	+	0	NA	intron (NM_177867, intron 4 of 14)	B1_Mus2|SINE|Alu	4437	NM_177867	329972	Mm.247201	NM_177867	ENSMUSG00000045004	Spata21	4933414G08	spermatogenesis associated 21	protein-coding
common_peak1-9931-50-46-0.486351464801315-1.0807309740853	chr12	104751055	104752428	+	0	NA	Intergenic	L2b|LINE|L2	-19034	NM_028980	74521	Mm.248619	NM_028980	ENSMUSG00000021209	Ppp4r4	8430415E04Rik|mKIAA1622	protein phosphatase 4, regulatory subunit 4	protein-coding
unique_peak1-1590-8-3-1.00522241794757-1.39487600375387	chr13	34204993	34205450	+	0	NA	promoter-TSS (NR_046184)	promoter-TSS (NR_046184)	-80	NR_046184	432745	Mm.159104	NR_046184		4930447K03Rik	-	RIKEN cDNA 4930447K03 gene	ncRNA
common_peak1-12413-8-10--0.454209200689727-1.078512453669	chr17	74293851	74294410	+	0	NA	intron (NM_011723, intron 1 of 35)	intron (NM_011723, intron 1 of 35)	5406	NM_011723	22436	Mm.11223	NM_011723	ENSMUSG00000024066	Xdh	XO|Xor|Xox-1|Xox1	xanthine dehydrogenase	protein-coding
unique_peak2-33332-5-12--1.40482005414695-1.62698961692433	chr11	20117009	20117769	+	0	NA	intron (NM_008996, intron 2 of 5)	intron (NM_008996, intron 2 of 5)	15784	NM_008996	19324	Mm.271944	NM_008996	ENSMUSG00000020149	Rab1	Gtbp|Rab-1|Rab1A|Ypt1|mKIAA3012	RAB1, member RAS oncogene family	protein-coding
common_peak2-29235-14-20--0.493101262421116-0.456667090758524	chr5	138994788	138995663	+	0	NA	Intergenic	Intergenic	10697	NM_029693	76658	Mm.73235	NM_029693	ENSMUSG00000029526	1700123K08Rik	-	RIKEN cDNA 1700123K08 gene	protein-coding
unique_peak1-365-21-3-2.56948926526624-4.33845181153635	chr1	141454796	141455597	+	0	NA	intron (NM_015780, intron 1 of 5)	B2_Mm2|SINE|B2	1603	NM_015780	50702	Mm.220362	NM_015780	ENSMUSG00000057037	Cfhr1	AI194696|CFHRB|Cfhl1	complement factor H-related 1	protein-coding
common_peak1-8277-9-8-0.0196884049619079-1.03275496310833	chr10	25927526	25928040	+	0	NA	Intergenic	RodERV21-int|LTR|ERV1	-21730	NM_001013766	268288	Mm.213322	NM_001013766	ENSMUSG00000051354	Samd3	Gm623	sterile alpha motif domain containing 3	protein-coding
common_peak1-17619-21-12-0.869049547125143-1.18646456559501	chr7	45560006	45560666	+	0	NA	Intergenic	Intergenic	959568	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak2-28413-21-26--0.185398236897233-0.318406410381916	chr4	141444514	141445167	+	0	NA	Intergenic	CT-rich|Low_complexity|Low_complexity	-14005	NM_025994	27984	Mm.395598	NM_025994	ENSMUSG00000040659	Efhd2	2600015J22Rik|AA408606|D4Wsu27e	EF hand domain containing 2	protein-coding
unique_peak2-39939-10-11--0.228547155712387-0.31137425193576	chrX	126749658	126750100	+	0	NA	intron (NM_172493, intron 23 of 26)	intron (NM_172493, intron 23 of 26)	465601	NM_172493	54004	Mm.10763	NM_017398	ENSMUSG00000034480	Diap2	Dia3|Diaph2|Drf2|E430022I22Rik	diaphanous homolog 2 (Drosophila)	protein-coding
unique_peak2-34613-0-6--3.64748585253182-1.56314192529759	chr14	75045816	75046168	+	0	NA	intron (NM_172812, intron 2 of 2)	B3|SINE|B2	5345	NM_172812	15558	Mm.214351	NM_172812	ENSMUSG00000034997	Htr2a	E030013E04|Htr-2|Htr2	5-hydroxytryptamine (serotonin) receptor 2A	protein-coding
unique_peak2-34235-3-13--2.22133801201688-2.36932189928148	chr13	52659665	52660202	+	0	NA	Intergenic	Intergenic	8661	NR_046069	100040572	Mm.278873	NR_046069		Gm2848	-	predicted gene 2848	ncRNA
common_peak1-11355-18-13-0.505564229170747-0.625923329873571	chr15	89180935	89181699	+	0	NA	TTS (NM_178919)	TTS (NM_178919)	4773	NM_178919	105847	Mm.34511	NM_178919	ENSMUSG00000022614	Lmf2	AI451006|Tmem112b|Tmem153	lipase maturation factor 2	protein-coding
common_peak2-31365-10-6-0.549060422951165-1.21398586181642	chr8	84969850	84970328	+	0	NA	Intergenic	L1_Rod|LINE|L1	-43604	NM_008357	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
unique_peak1-6722-25-7-1.86184990534511-3.43644803111449	chr8	41114421	41115377	+	0	NA	Intergenic	MTE-int|LTR|MaLR	257408	NM_030610	80857	Mm.425526	NM_030610	ENSMUSG00000031603	Fgf20	-	fibroblast growth factor 20	protein-coding
unique_peak2-37017-4-12--1.72390023199434-1.85743853830261	chr3	123385996	123386546	+	0	NA	intron (NR_121616, intron 1 of 13)	intron (NR_121616, intron 1 of 13)	7499	NR_121616	83398	Mm.443908	NM_031186	ENSMUSG00000027977	Ndst3	4921531K01Rik|4930511P15Rik|N-HSST 3|NDST-3	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3	protein-coding
common_peak1-15800-13-6-0.971117108580164-1.01572999746118	chr5	51511293	51511972	+	0	NA	Intergenic	Intergenic	433528	NR_027710	19017	Mm.259072	NM_008904	ENSMUSG00000029167	Ppargc1a	A830037N07Rik|ENSMUSG00000079510|Gm11133|PGC-1|PGC-1v|Pgc-1alpha|Pgc1|Pgco1|Ppargc1	peroxisome proliferative activated receptor, gamma, coactivator 1 alpha	protein-coding
unique_peak1-4778-8-2-1.42025991722641-1.65811743852845	chr3	126919350	126919901	+	0	NA	Intergenic	Intergenic	55402	NR_105029	100862268	Mm.444603	NR_105029	ENSMUSG00000097456	LOC100862268	-	uncharacterized LOC100862268	ncRNA
common_peak2-28940-9-11--0.395349094316936-0.344532117358383	chr5	98942315	98942760	+	0	NA	intron (NM_001024614, intron 3 of 5)	Lx5|LINE|L1	-37854	NR_030484	735265		NR_030484		Mir703	Mirn703|mmu-mir-703	microRNA 703	ncRNA
unique_peak1-3330-11-1-2.50869358425161-2.83420869758413	chr18	84803995	84804728	+	0	NA	intron (NM_177450, intron 4 of 11)	RMER5|LTR|ERV1	15126	NM_177450	338403	Mm.23278	NM_177450	ENSMUSG00000056162	Cndp1	AI746433|Cn1	carnosine dipeptidase 1 (metallopeptidase M20 family)	protein-coding
common_peak1-18218-18-24--0.330937038546373-0.380101753845076	chr8	25099180	25099970	+	0	NA	intron (NM_177086, intron 5 of 6)	(GAAA)n|Simple_repeat|Simple_repeat	319442	NM_177086	320158	Mm.121274	NM_177086	ENSMUSG00000037492	Zmat4	9630048M01Rik	zinc finger, matrin type 4	protein-coding
common_peak2-19957-10-10--0.103016273628528-0.301029995663987	chr1	132298586	132298999	+	0	NA	intron (NM_007827, intron 9 of 9)	L1Md_F3|LINE|L1	20784	NM_007827	13137	Mm.436759	NM_007827	ENSMUSG00000026401	Daf2	AI323748|Cd55b|Daf|Daf-TM|TM-DAF	decay accelerating factor 2	protein-coding
unique_peak1-1127-9-3-1.18961340640422-1.57096726280955	chr11	95086774	95087282	+	0	NA	Intergenic	Intergenic	-35815	NM_053093	93670	Mm.40085	NM_053093	ENSMUSG00000020872	Tac4	AW489379|PPT-C	tachykinin 4	protein-coding
common_peak1-14148-16-14-0.211373046659543-0.364171515310935	chr2	132099283	132100131	+	0	NA	intron (NM_138651, intron 1 of 12)	B2_Mm2|SINE|B2	10823	NM_138651	110911	Mm.284503	NM_138651	ENSMUSG00000058793	Cds2	5730450N06Rik|5730460C18Rik|AI854580|D2Wsu127e	CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2	protein-coding
common_peak2-24299-11-19--0.813234510635749-0.769930178837768	chr17	25919010	25919728	+	0	NA	TTS (NM_001271434)	TTS (NM_001271434)	1616	NR_105932	102466776		NR_105932		Mir6966	mmu-mir-6966	microRNA mir-6966	ncRNA
common_peak2-21500-14-39--1.42271193452972-2.70027529094734	chr11	89186970	89187791	+	0	NA	Intergenic	Intergenic	-23507	NM_008711	18121	Mm.135266	NM_008711	ENSMUSG00000048616	Nog	-	noggin	protein-coding
common_peak2-25087-43-47-0.197600684802547-0.437419278836636	chr18	36348274	36349549	+	0	NA	intron (NM_001167891, intron 1 of 9)	intron (NM_001167891, intron 1 of 9)	7903	NM_001167891	100042150	Mm.380390	NM_001167891	ENSMUSG00000060275	Nrg2	Don1|NTAK	neuregulin 2	protein-coding
unique_peak1-3397-9-2-1.60465090568306-1.87199725847353	chr19	4436280	4436795	+	0	NA	intron (NM_007485, intron 1 of 4)	intron (NM_007485, intron 1 of 4)	-2786	NR_045990	319314	Mm.393810	NR_045989	ENSMUSG00000087132	A930001C03Rik	-	RIKEN cDNA A930001C03 gene	ncRNA
common_peak1-12057-44-57--0.0360881605590366-0.301029995664025	chr17	23546334	23547634	+	0	NA	Intergenic	Lx3_Mus|LINE|L1	25214	NM_001104580	619697	Mm.469848	NM_001104580	ENSMUSG00000090966	Vmn2r116	EG619697|V2Rp5	vomeronasal 2, receptor 116	protein-coding
common_peak1-16763-23-11-1.13680500378792-1.66030262873422	chr6	34797261	34798151	+	0	NA	intron (NM_178630, intron 18 of 18)	B1_Mus2|SINE|Alu	-15440	NM_197986	68487	Mm.248440	NM_197986	ENSMUSG00000057137	Tmem140	1110007F12Rik	transmembrane protein 140	protein-coding
common_peak1-12383-23-39--0.600160590378282-0.869438253311888	chr17	66448524	66449557	+	0	NA	intron (NM_028388, intron 1 of 7)	intron (NM_028388, intron 1 of 7)	1859	NM_001278415	72900	Mm.2206	NM_028388	ENSMUSG00000024099	Ndufv2	2900010C23Rik	NADH dehydrogenase (ubiquinone) flavoprotein 2	protein-coding
common_peak1-15073-13-19--0.543456064249594-0.466170754204149	chr3	126827279	126827961	+	0	NA	Intergenic	Intergenic	-36603	NR_105030	100862268	Mm.444603	NR_105029	ENSMUSG00000097456	LOC100862268	-	uncharacterized LOC100862268	ncRNA
unique_peak2-36835-4-7--1.02346051385325-1.09384600808989	chr3	88622665	88622984	+	0	NA	intron (NR_028359, intron 13 of 17)	B1_Mus2|SINE|Alu	13585	NR_015498	319830	Mm.400394	NR_015498		1500004A13Rik	5430404N14Rik|BB132176	RIKEN cDNA 1500004A13 gene	ncRNA
unique_peak2-34363-9-6-0.382258484346616-1.11707584880836	chr13	106946630	106947065	+	0	NA	Intergenic	Lx3C|LINE|L1	713074	NM_008308	15550	Mm.4716	NM_008308	ENSMUSG00000021721	Htr1a	Gpcr18	5-hydroxytryptamine (serotonin) receptor 1A	protein-coding
common_peak2-29619-42-46-0.187740476189546-0.440152849854807	chr6	54201972	54203523	+	0	NA	intron (NM_001163640, intron 6 of 12)	intron (NM_001163640, intron 6 of 12)	-20069	NM_023543	69993	Mm.321147	NM_023543	ENSMUSG00000004633	Chn2	1700026N20Rik|4930557O16Rik|ARHGAP3|Bch	chimerin 2	protein-coding
unique_peak1-5296-6-2-0.980435609659146-1.26211192963361	chr5	73189847	73190363	+	0	NA	intron (NM_013689, intron 3 of 17)	intron (NM_013689, intron 3 of 17)	-46089	NM_001122754	22165	Mm.3264	NM_013698	ENSMUSG00000054892	Txk	A130089B16Rik|Btkl|PTK-RL-18|PTK4|Rlk	TXK tyrosine kinase	protein-coding
common_peak1-15438-14-15--0.100783839642355-0.301029995663982	chr4	89359758	89360414	+	0	NA	3' UTR (NM_175647, exon 2 of 2)	3' UTR (NM_175647, exon 2 of 2)	5197	NM_175647	242523	Mm.130167	NM_175647	ENSMUSG00000043753	Dmrta1	Dmrt4	doublesex and mab-3 related transcription factor like family A1	protein-coding
common_peak1-14695-8-14--0.901668177660948-0.660903317613906	chr3	67582716	67583237	+	0	NA	Intergenic	Intergenic	-113166	NM_001113419	100505386	Mm.331064	NM_001113419		Gm21949	Iqcj-schip1|Schip-1-iqcj	predicted gene, 21949	protein-coding
unique_peak1-688-6-1-1.5653981103803-1.56314192529759	chr10	78215899	78216285	+	0	NA	promoter-TSS (NM_027630)	promoter-TSS (NM_027630)	-280	NM_027630	70976	Mm.188505	NM_027630	ENSMUSG00000078442	Ccdc105	4931413A09Rik	coiled-coil domain containing 105	protein-coding
unique_peak1-3008-9-1-2.18961340640422-2.31132995230379	chr17	84161082	84161526	+	0	NA	intron (NM_054082, intron 6 of 16)	B2_Mm1t|SINE|B2	55801	NM_001171052	116871	Mm.277668	NM_054082	ENSMUSG00000055817	Mta3	1110002J22Rik|mKIAA1266	metastasis associated 3	protein-coding
unique_peak2-38983-3-7--1.41398308995928-1.23214870625617	chr8	40963668	40964088	+	0	NA	Intergenic	MLT1B|LTR|MaLR	-235846	NM_001113326	20288	Mm.239291	NM_031195	ENSMUSG00000025044	Msr1	MRS-A|MSR|MSR-A|SR-AI|SR-AII|Scara1|Scvr	macrophage scavenger receptor 1	protein-coding
common_peak1-8886-20-30--0.466121525795682-0.569352520859861	chr11	48816858	48817703	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-11524	NM_001145164	100039796	Mm.482363	NM_001145164	ENSMUSG00000078921	Tgtp2	OTTMUSG00000005537	T cell specific GTPase 2	protein-coding
unique_peak1-1621-9-1-2.18961340640422-2.31132995230379	chr13	42310369	42310974	+	0	NA	Intergenic	B3A|SINE|B2	-85968	NM_010104	13614	Mm.14543	NM_010104	ENSMUSG00000021367	Edn1	ET-1|preproET	endothelin 1	protein-coding
unique_peak2-32644-3-11--1.99894559068043-1.95434855131066	chr1	131527816	131528335	+	0	NA	intron (NM_172485, intron 5 of 27)	MTD|LTR|MaLR	358194	NM_172485	210417	Mm.380518	NM_172485	ENSMUSG00000042581	Thsd7b	1700074E13Rik|B930082A18|D130067I03Rik	thrombospondin, type I, domain containing 7B	protein-coding
unique_peak1-2390-7-5-0.214128329577033-1.01466476204226	chr15	97559505	97560032	+	0	NA	intron (NM_001168693, intron 1 of 9)	intron (NM_001168693, intron 1 of 9)	2068	NM_001168693	19011	Mm.1001	NM_008902	ENSMUSG00000022468	Endou	Pp11r|Tcl-30	endonuclease, polyU-specific	protein-coding
unique_peak1-2213-12-2-2.06381348436648-2.79529063155376	chr15	73156877	73157520	+	0	NA	intron (NM_007982, intron 4 of 31)	intron (NM_007982, intron 4 of 31)	96423	NM_007982	14083	Mm.254494	NM_007982	ENSMUSG00000022607	Ptk2	FAK|FRNK|Fadk|mKIAA4203|p125FAK	PTK2 protein tyrosine kinase 2	protein-coding
common_peak2-21889-15-34--1.11711826638931-1.74023246399357	chr12	3235315	3236137	+	0	NA	promoter-TSS (NR_015551)	promoter-TSS (NR_015551)	-65	NR_015551	74173	Mm.309774	NM_028796	ENSMUSG00000079179	Rab10os	1700012B15Rik|1810036A22Rik	RAB10, member RAS oncogene family, opposite strand	ncRNA
common_peak2-27130-18-35--0.857005850213961-1.20071330053878	chr3	20057140	20058403	+	0	NA	Intergenic	RSINE1|SINE|B4	-2756	NM_013755	27357	Mm.6375	NM_013755	ENSMUSG00000019528	Gyg	AU017667|Gyg1	glycogenin	protein-coding
unique_peak2-39964-4-7--1.02346051385325-1.09384600808989	chrX	142468214	142468651	+	0	NA	Intergenic	Lx6|LINE|L1	-546250	NM_153319	27494	Mm.100068	NM_153319	ENSMUSG00000041688	Amot	CAG-2|D0Kist1|Sii6	angiomotin	protein-coding
common_peak1-19229-9-7-0.18961340640422-1.05908390183068	chr9	108136930	108137487	+	0	NA	intron (NM_001276485, intron 1 of 2)	intron (NM_001276485, intron 1 of 2)	28938	NM_010017	13138	Mm.7524	NM_010017		Dag1	D9Wsu13e|DG|Dp427|Dp71	dystroglycan 1	protein-coding
unique_peak1-3999-8-1-2.00522241794757-2.05605744720049	chr2	35445818	35446307	+	0	NA	intron (NM_001290637, intron 1 of 16)	intron (NM_001290637, intron 1 of 16)	7702	NM_001290637	69601	Mm.29629	NM_001001602	ENSMUSG00000026883	Dab2ip	2310011D08Rik|AI480459|Aip1|mKIAA1743	disabled 2 interacting protein	protein-coding
unique_peak2-40010-5-10--1.16381195464315-1.33892459842472	chrY	43921378	43921890	+	0	NA	Intergenic	Intergenic	41534376	NM_001270512	100041505	Mm.491824	NM_001270512		Gm3376	Rbmy1b	predicted gene 3376	protein-coding
common_peak2-31272-12-18--0.599151528355947-0.476916024233333	chr8	71610933	71611591	+	0	NA	intron (NM_153054, intron 1 of 16)	B2_Mm2|SINE|B2	-1373	NM_007509	11966	Mm.249096	NM_007509	ENSMUSG00000006273	Atp6v1b2	AI194269|AI790362|Atp6b2|HO57|R74844	ATPase, H+ transporting, lysosomal V1 subunit B2	protein-coding
common_peak1-14200-12-8-0.478850983645327-0.562038191119709	chr2	148184135	148184861	+	0	NA	Intergenic	Intergenic	-36615	NM_009219	20608	Mm.35324	NM_009219	ENSMUSG00000037014	Sstr4	Smstr4|sst4	somatostatin receptor 4	protein-coding
common_peak1-11627-21-23--0.0154732354549205-0.305650498375555	chr16	20516817	20517706	+	0	NA	5' UTR (NM_007889, exon 1 of 15)	5' UTR (NM_007889, exon 1 of 15)	124	NM_007889	13544	Mm.247259	NM_007889	ENSMUSG00000003233	Dvl3	-	dishevelled 3, dsh homolog (Drosophila)	protein-coding
unique_peak2-38231-7-7--0.200909169701811-0.97990265578305	chr6	116264121	116264625	+	0	NA	exon (NM_001290339, exon 4 of 7)	exon (NM_001290339, exon 4 of 7)	-23768	NM_027920	71779	Mm.27064	NM_027920	ENSMUSG00000025702	March8	1300017E09Rik|Mir	membrane-associated ring finger (C3HC4) 8	protein-coding
unique_peak1-3630-16-9-0.796335547380699-0.844317084070804	chr19	37520855	37521674	+	0	NA	Intergenic	Intergenic	11933	NM_008245	15242	Mm.33896	NM_008245		Hhex	Hex|Hex1|Hhex-rs2|Prh|Prhx	hematopoietically expressed homeobox	protein-coding
common_peak1-18083-15-19--0.309763344331706-0.356936432242222	chr8	78741387	78742153	+	0	NA	Intergenic	L2a|LINE|L2	682302	NR_028579	100039211	Mm.367571	NR_028579	ENSMUSG00000074235	Gm10649	ENSMUSG00000074235	predicted gene 10649	ncRNA
common_peak1-17156-41-41-0.3088312820699-0.584217371416963	chr6	118478725	118480033	+	0	NA	intron (NM_001081112, intron 20 of 33)	intron (NM_001081112, intron 20 of 33)	32895	NM_001081112	232339	Mm.276116	NM_001081112	ENSMUSG00000007827	Ankrd26	5730521P14Rik|BC008111|mKIAA1074	ankyrin repeat domain 26	protein-coding
common_peak2-20709-16-23--0.466698858453094-0.497202060940027	chr10	94047715	94048617	+	0	NA	TTS (NR_106070)	TTS (NR_106070)	778	NR_106070	102466817		NR_106070	miRBase:MI0023706	Mir7211	mmu-mir-7211	microRNA mir-7211	ncRNA
unique_peak1-2093-11-1-2.50869358425161-2.83420869758413	chr15	36961219	36961662	+	0	NA	Intergenic	Intergenic	-24283	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
unique_peak1-5798-6-0-2.5653981103803-2.10720996964787	chr6	62459496	62459891	+	0	NA	Intergenic	L2a|LINE|L2	-747158	NM_008167	14804	Mm.439651	NM_008167		Grid2	B230104L07Rik|GluD2|GluRdelta2|Lc|Lc<J>|MMS10-AC|Ms10ac|cpr|ho|nmf408|tpr	glutamate receptor, ionotropic, delta 2	protein-coding
common_peak2-29513-23-4-2.39983940962172-4.21583923654667	chr6	34709530	34709950	+	0	NA	intron (NM_145575, intron 6 of 11)	intron (NM_145575, intron 6 of 11)	-20692	NM_001289657	76223	Mm.150047	NM_178630	ENSMUSG00000038836	Agbl3	2900053G10Rik|4930431N21Rik|6530406M24Rik|CCP3	ATP/GTP binding protein-like 3	protein-coding
common_peak2-23890-32-49--0.364764170555064-0.548322060310103	chr16	97762559	97764190	+	0	NA	intron (NR_003508, intron 2 of 13)	L1MEc|LINE|L1	5684	NM_013606	17858	Mm.14157	NM_013606	ENSMUSG00000023341	Mx2	AI528743|Mx-2	MX dynamin-like GTPase 2	protein-coding
unique_peak2-34221-4-5--0.608423014574403-0.909929411522249	chr13	49341055	49341414	+	0	NA	intron (NM_028340, intron 1 of 4)	MIRc|SINE|MIR	2298	NM_025491	66329	Mm.34308	NM_025491	ENSMUSG00000021384	Susd3	1700017I11Rik|2810440J20Rik	sushi domain containing 3	protein-coding
unique_peak2-37478-4-12--1.72390023199434-1.85743853830261	chr5	3596225	3596811	+	0	NA	promoter-TSS (NM_172991)	promoter-TSS (NM_172991)	29	NM_172991	269623	Mm.38014	NM_172991	ENSMUSG00000040302	Rbm48	AW548102|C030048B08Rik	RNA binding motif protein 48	protein-coding
unique_peak1-4350-7-0-2.79909083029819-2.40823996531185	chr2	155283784	155284265	+	0	NA	Intergenic	Intergenic	-17505	NM_019825	56406	Mm.27592	NM_019825	ENSMUSG00000038369	Ncoa6	AIB3|ASC-2|ASC2|NRC|Ncoa7|PRIP|RAP250|mKIAA0181	nuclear receptor coactivator 6	protein-coding
common_peak2-20493-24-77--1.49219231609453-5.46451385390177	chr10	57531694	57532794	+	0	NA	TTS (NM_020561)	TTS (NM_020561)	17894	NM_020561	57319	Mm.2379	NM_020561	ENSMUSG00000019872	Smpdl3a	0610010C24Rik|AI529588|ASM3A|ASML3|ASML3A	sphingomyelin phosphodiesterase, acid-like 3A	protein-coding
common_peak2-20873-81-108-0.103865278231639-0.379223861894718	chr11	101645730	101646494	+	0	NA	intron (NM_008815, intron 1 of 12)	CpG-2642	512	NM_008815	18612	Mm.5025	NM_008815	ENSMUSG00000017724	Etv4	AW414408|Pea-3|Pea3	ets variant 4	protein-coding
unique_peak2-32893-3-6--1.22133801201688-1.08602067057793	chr10	16544950	16545360	+	0	NA	Intergenic	L1Md_T|LINE|L1	270433	NR_038020	100504235	Mm.84044	NR_038020		Gm20125	-	predicted gene, 20125	ncRNA
common_peak1-18952-15-9-0.690236655668294-0.732381977911291	chr9	50752077	50752712	+	0	NA	intron (NM_178710, intron 3 of 15)	RMER1B|Other|Other	64784	NM_178710	235344	Mm.104932	NM_178710	ENSMUSG00000037112	Sik2	G630080D20Rik|Snf1lk2	salt inducible kinase 2	protein-coding
unique_peak2-35316-15-20--0.380152672223105-0.397739447719386	chr17	14989676	14990725	+	0	NA	intron (NM_175173, intron 23 of 24)	intron (NM_175173, intron 23 of 24)	89929	NM_175173	71682	Mm.122698	NM_175173	ENSMUSG00000046991	Wdr27	0610012K18Rik	WD repeat domain 27	protein-coding
common_peak2-21742-51-73--0.134529540026377-0.356884963416664	chr11	115603349	115604653	+	0	NA	Intergenic	Intergenic	-22746	NM_028014	71947	Mm.23168	NM_028014	ENSMUSG00000020747	2310067B10Rik	Kiaa0195|mKIAA0195	RIKEN cDNA 2310067B10 gene	protein-coding
common_peak2-27635-42-124--1.2234549567949-6.44316080342698	chr3	106721308	106722871	+	0	NA	Intergenic	L1VL2|LINE|L1	-96614	NM_146489	258482	Mm.377527	NM_146489	ENSMUSG00000043529	Olfr266	MOR122-2	olfactory receptor 266	protein-coding
unique_peak1-4651-10-9-0.0344872501214071-1.05503135781948	chr3	89196173	89196766	+	0	NA	intron (NR_040403, intron 1 of 1)	CpG	656	NM_009565	22724	Mm.262184	NM_009565	ENSMUSG00000028042	Zbtb7b	Thpok|Zfp67|c-Krox	zinc finger and BTB domain containing 7B	protein-coding
common_peak1-7572-60-49-0.710435671845807-2.12576351360237	chr1	45794629	45795954	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-57055	NM_028599	73674	Mm.270376	NM_028599	ENSMUSG00000025995	Wdr75	1300003A18Rik|2410118I19Rik|C77608	WD repeat domain 75	protein-coding
common_peak2-28394-31-35-0.0553136693708112-0.313095283157747	chr4	139597630	139599142	+	0	NA	intron (NM_198610, intron 4 of 9)	(CA)n|Simple_repeat|Simple_repeat	-74445	NM_173427	242721	Mm.60400	NM_173427	ENSMUSG00000078234	Klhdc7a	B230308G19Rik	kelch domain containing 7A	protein-coding
common_peak2-31684-55-75--0.0433076422908831-0.302487370638123	chr8	127063831	127065348	+	0	NA	intron (NM_029746, intron 9 of 17)	MIRc|SINE|MIR	19922	NM_029746	76332	Mm.240108	NM_029746	ENSMUSG00000031979	Cog2	1190002B08Rik|2700012E02Rik|C86089|Ldlc	component of oligomeric golgi complex 2	protein-coding
common_peak2-22461-21-31--0.430510734733764-0.49501414494053	chr13	45001271	45002187	+	0	NA	exon (NM_001205044, exon 9 of 19)	exon (NM_001205044, exon 9 of 19)	95736	NM_025772	94245	Mm.352311	NM_025772	ENSMUSG00000057531	Dtnbp1	5430437B18Rik|AW048963|Bloc1s8|dysbindin|sdy	dystrobrevin binding protein 1	protein-coding
common_peak1-9898-10-27--1.45093957704883-2.06249767704514	chr12	86079025	86079596	+	0	NA	Intergenic	L1Md_A|LINE|L1	34752	NM_023409	67963	Mm.282556	NM_023409	ENSMUSG00000021242	Npc2	2700012J19Rik|AA408070|AU045843|HE1	Niemann-Pick type C2	protein-coding
unique_peak1-3300-13-6-0.971117108580164-1.01572999746118	chr18	76030608	76031256	+	0	NA	intron (NM_145356, intron 1 of 4)	MTEb|LTR|MaLR	51100	NM_145356	207259	Mm.159332	NM_145356	ENSMUSG00000044646	Zbtb7c	B230208J24Rik|Kr-pok|Zbtb36	zinc finger and BTB domain containing 7C	protein-coding
unique_peak1-6953-7-4-0.477162735410827-1.09384600808989	chr8	111708734	111709246	+	0	NA	Intergenic	Intergenic	155818	NR_002928	384864	Mm.390083	NR_002928		Gm1943	-	WD repeat domain 70 pseudogene	pseudo
common_peak2-22185-20-39--0.83385331029617-1.34355844763204	chr12	105684551	105685869	+	0	NA	Intergenic	Intergenic	26236	NM_010351	14836	Mm.129	NM_010351	ENSMUSG00000021095	Gsc	-	goosecoid homeobox	protein-coding
unique_peak1-3378-7-1-1.79909083029819-1.80617997398389	chr19	3743891	3744419	+	0	NA	Intergenic	L1M4c|LINE|L1	-23266	NM_001167889	225888	Mm.278578	NM_144871	ENSMUSG00000045098	Suv420h1	AA117471|C630029K18Rik|KMT5B|Suv4-20h1	suppressor of variegation 4-20 homolog 1 (Drosophila)	protein-coding
unique_peak2-35476-3-7--1.41398308995928-1.23214870625617	chr17	44501917	44502332	+	0	NA	Intergenic	Intergenic	176603	NM_172621	224796	Mm.37666	NM_172621	ENSMUSG00000023959	Clic5	5730531E12Rik|B330005L24|Gm322|jbg	chloride intracellular channel 5	protein-coding
unique_peak1-5560-13-7-0.778472030637769-0.817533494790411	chr5	146703990	146704562	+	0	NA	Intergenic	L1Md_A|LINE|L1	-12846	NM_007818	13112	Mm.332844	NM_007818	ENSMUSG00000056035	Cyp3a11	AI256190|Cyp3a|IIIAm1|Pcn	cytochrome P450, family 3, subfamily a, polypeptide 11	protein-coding
unique_peak1-6001-10-4-1.03448725012141-1.5150158574804	chr6	100800324	100800833	+	0	NA	intron (NM_182939, intron 2 of 8)	URR1B|DNA|MER1_type	16946	NM_182939	232314	Mm.27223	NM_182939	ENSMUSG00000052144	Ppp4r2	BE691708|C230060M08Rik	protein phosphatase 4, regulatory subunit 2	protein-coding
unique_peak2-36510-3-4--0.73591118484664-0.864171920961574	chr2	157430749	157431149	+	0	NA	Intergenic	Intergenic	-38852	NM_016916	53619	Mm.480461	NM_016916	ENSMUSG00000067787	Blcap	AI462828|Bc10	bladder cancer associated protein homolog (human)	protein-coding
unique_peak1-3532-7-2-1.21412832957703-1.45399745587252	chr19	21087296	21087706	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-58809	NM_028953	13409	Mm.219585	NM_028953	ENSMUSG00000024749	Tmc1	4933416G09Rik|Beethoven|Bth|CWEA1|dn	transmembrane channel-like gene family 1	protein-coding
common_peak2-24241-55-67-0.117157029902363-0.376523540924376	chr16	90821364	90822664	+	0	NA	Intergenic	L1MB3|LINE|L1	-9090	NM_027627	70967	Mm.253077	NM_027627		Eva1c	1700092M14Rik|4931408A02Rik|Fam176c	eva-1 homolog C (C. elegans)	protein-coding
unique_peak2-38381-7-12--0.901348887842903-1.31827279259406	chr7	16364303	16364890	+	0	NA	Intergenic	L1Md_F2|LINE|L1	28877	NM_145709	252829	Mm.222738	NM_145709		Obox5	C87544	oocyte specific homeobox 5	protein-coding
common_peak2-31585-6-7--0.434601889619698-0.97990265578305	chr8	120493465	120493749	+	0	NA	Intergenic	(TCTA)n|Simple_repeat|Simple_repeat	-167778	NM_026758	68533	Mm.181836	NM_026758	ENSMUSG00000031843	Mphosph6	1110001M01Rik|AA536809|C86426	M phase phosphoprotein 6	protein-coding
common_peak2-25814-16-16-0.0308008010177225-0.307611222530525	chr19	38032374	38032908	+	0	NA	intron (NM_001099634, intron 20 of 52)	B3|SINE|B2	85426	NM_001099634	226101	Mm.34674	NM_177035	ENSMUSG00000048612	Myof	2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3	myoferlin	protein-coding
common_peak2-29019-38-46-0.0168638076208927-0.31027100108714	chr5	112324711	112325976	+	0	NA	Intergenic	Intergenic	-134595	NR_045833	269683	Mm.136946	NM_207252	ENSMUSG00000085271	E130006D01Rik	Gm16018|Gm681|OTTMUSG00000029083	RIKEN cDNA E130006D01 gene	ncRNA
common_peak1-8565-77-102-0.0980260523727789-0.366599446653044	chr10	95323133	95324606	+	0	NA	Intergenic	Intergenic	-79428	NM_001001932	216238	Mm.210035	NM_001001932	ENSMUSG00000036499	Eea1	A430109M19Rik|B230358H09Rik|ZFYVE2	early endosome antigen 1	protein-coding
unique_peak1-389-8-4-0.683294323060208-1.21878474469819	chr1	153168687	153169190	+	0	NA	Intergenic	Intergenic	-22690	NM_001039512	117198	Mm.33764	NM_028582	ENSMUSG00000023150	Ivns1abp	1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850	influenza virus NS1A binding protein	protein-coding
common_peak2-31261-12-9-0.326847890200276-0.459837087125828	chr8	70880038	70880573	+	0	NA	TTS (NM_001252623)	TTS (NM_001252623)	-12053	NR_038189	73609	Mm.443247	NR_038181	ENSMUSG00000085197	1700125H03Rik	4930510D22Rik	RIKEN cDNA 1700125H03 gene	ncRNA
unique_peak2-34225-0-7--3.84013093047421-1.80617997398389	chr13	49644788	49645108	+	0	NA	intron (NM_001172481, intron 1 of 7)	intron (NM_001172481, intron 1 of 7)	5136	NM_025711	66695	Mm.383216	NM_025711	ENSMUSG00000021388	Aspn	4631401G09Rik|AA986886|Plap1|Slrr1c	asporin	protein-coding
common_peak2-31517-29-8-1.9423650791728-4.27327766748815	chr8	108764215	108764791	+	0	NA	intron (NM_145404, intron 8 of 17)	MTC|LTR|MaLR	29549	NM_145404	214572	Mm.251804	NM_145404		Prmt7	4933402B05Rik|BC006705	protein arginine N-methyltransferase 7	protein-coding
common_peak2-22693-12-9-0.326847890200276-0.459837087125828	chr13	98693102	98693728	+	0	NA	intron (NM_012026, intron 35 of 35)	intron (NM_012026, intron 35 of 35)	282705	NM_012026	110596	Mm.252718	NM_012026	ENSMUSG00000021662	Arhgef28	9230110L08Rik|AI323540|D13Bwg1089e|RIP2|Rgnef|RhoGEF|Rhoip2|p190RhoGEF	Rho guanine nucleotide exchange factor (GEF) 28	protein-coding
common_peak2-26341-35-30-0.477173948075629-0.806432121853427	chr2	35461833	35462708	+	0	NA	intron (NM_001290637, intron 1 of 16)	intron (NM_001290637, intron 1 of 16)	-15231	NM_001290641	69601	Mm.29629	NM_001001602	ENSMUSG00000026883	Dab2ip	2310011D08Rik|AI480459|Aip1|mKIAA1743	disabled 2 interacting protein	protein-coding
common_peak1-7471-38-37-0.323525145854945-0.611014125894502	chr1	166378784	166380203	+	0	NA	intron (NM_009721, intron 2 of 5)	intron (NM_009721, intron 2 of 5)	8993	NM_009721	11931	Mm.4550	NM_009721	ENSMUSG00000026576	Atp1b1	Atp4b|Atpb|Atpb-1|NKbeta1	ATPase, Na+/K+ transporting, beta 1 polypeptide	protein-coding
common_peak2-22334-11-8-0.338768582809301-1.14218153353838	chr13	23562809	23563303	+	0	NA	Intergenic	Intergenic	-5286	NM_013483	12231	Mm.1420	NM_013483	ENSMUSG00000000706	Btn1a1	Btn	butyrophilin, subfamily 1, member A1	protein-coding
unique_peak1-1484-11-4-1.18676548936425-1.68134727924692	chr12	117572849	117573374	+	0	NA	intron (NM_028731, intron 7 of 21)	intron (NM_028731, intron 7 of 21)	53416	NM_028731	52635	Mm.273755	NM_028731	ENSMUSG00000021171	Esyt2	2410017M09Rik|4921504I16Rik|CHR2SYT|D12Ertd551e|Fam62b	extended synaptotagmin-like protein 2	protein-coding
common_peak2-31347-13-23--0.806490470083387-0.781208772652439	chr8	84237309	84237853	+	0	NA	intron (NM_001297596, intron 2 of 24)	Lx9|LINE|L1	371120	NM_001297593	234515	Mm.324468	NM_001024617	ENSMUSG00000037940	Inpp4b	E130107I17Rik	inositol polyphosphate-4-phosphatase, type II	protein-coding
common_peak1-7586-38-25-0.871012941157439-1.90173050117047	chr1	54601549	54603319	+	0	NA	intron (NM_001163314, intron 3 of 26)	intron (NM_001163314, intron 3 of 26)	12094	NM_001163314	241062	Mm.103539	NM_175508	ENSMUSG00000073678	Pgap1	5033403E17Rik|9030223K07Rik|A530084K22|D230012E17Rik|oto	post-GPI attachment to proteins 1	protein-coding
common_peak2-31923-17-14-0.311405742596519-0.466170754204149	chr9	62811406	62812080	+	0	NA	intron (NM_019663, intron 1 of 13)	intron (NM_019663, intron 1 of 13)	16943	NM_019663	56469	Mm.431253	NM_019663	ENSMUSG00000032405	Pias1	2900068C24Rik|Ddxbp1|GBP	protein inhibitor of activated STAT 1	protein-coding
common_peak2-22147-18-36--0.896534214400599-1.30767018140165	chr12	86241882	86242532	+	0	NA	Intergenic	B3|SINE|B2	-24762	NM_013589	16997	Mm.3900	NM_013589	ENSMUSG00000002020	Ltbp2	AW208642	latent transforming growth factor beta binding protein 2	protein-coding
common_peak2-22574-36-47--0.105641414553402-0.310471923828336	chr13	65112083	65113539	+	0	NA	Intergenic	Intergenic	-21555	NM_001083890	238683	Mm.295543	NM_001083890	ENSMUSG00000074849	Spata31d1c	4932441B19Rik|Fam75d1c	spermatogenesis associated 31 subfamily D, member 1C	protein-coding
unique_peak1-5271-10-0-3.35641534500877-3.31132995230379	chr5	64739567	64740029	+	0	NA	intron (NM_019636, intron 19 of 19)	intron (NM_019636, intron 19 of 19)	118202	NM_001289514	57915	Mm.286353	NM_019636	ENSMUSG00000029174	Tbc1d1	1110062G02Rik|AI385682|AW555803|Tbc1|mKIAA1108	TBC1 domain family, member 1	protein-coding
common_peak1-16229-18-21--0.146512467408946-0.306326795069975	chr5	100621947	100622821	+	0	NA	Intergenic	L1MC5|LINE|L1	-17327	NR_040679	69571	Mm.396412	NR_040679		2310034O05Rik	-	RIKEN cDNA 2310034O05 gene	ncRNA
common_peak1-13939-31-33-0.137775829562784-0.350690697593776	chr2	90744479	90745413	+	0	NA	promoter-TSS (NM_025991)	promoter-TSS (NM_025991)	3	NM_025991	67136	Mm.330394	NM_025991	ENSMUSG00000005505	Kbtbd4	2510026C23Rik	kelch repeat and BTB (POZ) domain containing 4	protein-coding
unique_peak1-4210-10-6-0.549060422951165-1.21398586181642	chr2	119203477	119203993	+	0	NA	intron (NM_026574, intron 34 of 35)	(CAAAA)n|Simple_repeat|Simple_repeat	26757	NM_026929	69065	Mm.35083	NM_026929	ENSMUSG00000027313	Chac1	1810008K03Rik	ChaC, cation transport regulator 1	protein-coding
common_peak2-29896-12-8-0.478850983645327-0.562038191119709	chr6	113438905	113439451	+	0	NA	intron (NM_133930, intron 4 of 9)	intron (NM_133930, intron 4 of 9)	5615	NM_133930	171508	Mm.41593	NM_133930	ENSMUSG00000030284	Creld1	AI843811	cysteine-rich with EGF-like domains 1	protein-coding
unique_peak2-32458-1-6--2.43441193227435-1.56314192529759	chr1	13257914	13258303	+	0	NA	intron (NM_001077695, intron 2 of 21)	intron (NM_001077695, intron 2 of 21)	106056	NM_001077695	17978	Mm.2537	NM_008678	ENSMUSG00000005886	Ncoa2	9530095N19|D1Ertd433e|GRIP-1|Grip1|KAT13C|SRC-2|TIF-2|TIF2|bHLHe75	nuclear receptor coactivator 2	protein-coding
unique_peak1-779-464-167-2.51670507754497-134.449026933572	chr11	3139695	3147124	+	0	NA	intron (NM_001166547, intron 18 of 18)	intron (NM_001166547, intron 18 of 18)	22980	NM_007879	13494	Mm.3250	NM_007879	ENSMUSG00000020457	Drg1	AA408859|AI132520|Nedd3	developmentally regulated GTP binding protein 1	protein-coding
unique_peak2-37382-4-11--1.6084230145744-1.68134727924692	chr4	139186768	139187339	+	0	NA	intron (NM_175438, intron 1 of 14)	URR1B|DNA|MER1_type	8244	NM_175438	212647	Mm.273571	NM_175438	ENSMUSG00000028737	Aldh4a1	A930035F14Rik|Ahd-1|Ahd1|Aldh4|Aldh5a1|E330022C09|P5cd|P5cdh|P5cdhl|P5cdhs|Ssdh1	aldehyde dehydrogenase 4 family, member A1	protein-coding
common_peak1-17773-48-75--0.277000362208771-0.527904843875901	chr7	92874062	92875345	+	0	NA	Intergenic	RMER15-int|LTR|ERVL	28788	NM_001105185	244114	Mm.469907	NM_001105185	ENSMUSG00000051877	Vmn2r72	EG244114|Vmn2r72-ps	vomeronasal 2, receptor 72	protein-coding
common_peak2-19740-48-73--0.238526214394136-0.460841271984764	chr1	74303375	74304773	+	0	NA	intron (NM_029711, intron 6 of 9)	intron (NM_029711, intron 6 of 9)	20950	NM_029711	76709	Mm.337038	NM_029711	ENSMUSG00000006304	Arpc2	2210023N03Rik|34kDa|p34-Arc	actin related protein 2/3 complex, subunit 2	protein-coding
common_peak1-16441-11-10-0.0492619656143161-0.31137425193576	chr5	134957302	134957948	+	0	NA	Intergenic	B4A|SINE|B4	-25039	NM_001081464	57080	Mm.332735	NM_020331	ENSMUSG00000023079	Gtf2ird1	1700012P16Rik|BEN|Cream1|ESTM9|GTF3|Gtf2il|MusTRD1|Tg(Alb1-Myc)166.8Sst|WBSCR11|X83320	general transcription factor II I repeat domain-containing 1	protein-coding
unique_peak1-4818-11-2-1.92373108353046-2.32232533660526	chr3	144642948	144643415	+	0	NA	Intergenic	RMER12|LTR|ERVK	-5172	NM_207208	99663	Mm.442050	NM_207208	ENSMUSG00000068547	Clca6	9130020L07Rik|AI504701|Clca4	chloride channel calcium activated 6	protein-coding
unique_peak1-6448-7-0-2.79909083029819-2.40823996531185	chr7	99305130	99305526	+	0	NA	intron (NM_001243046, intron 4 of 14)	intron (NM_001243046, intron 4 of 14)	-78152	NM_001243047	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
common_peak1-16740-29-22-0.588728124558098-0.950553505527076	chr6	31205536	31206705	+	0	NA	intron (NR_040257, intron 2 of 7)	intron (NR_040257, intron 2 of 7)	35769	NR_040261	73652	Mm.441297	NR_040257	ENSMUSG00000087380	2210408F21Rik	-	RIKEN cDNA 2210408F21 gene	ncRNA
common_peak2-24201-54-75--0.0748417518138513-0.314325647716191	chr16	64770138	64771617	+	0	NA	promoter-TSS (NM_026273)	promoter-TSS (NM_026273)	-112	NM_026273	67609	Mm.212157	NM_026273	ENSMUSG00000059920	4930453N24Rik	AI649104	RIKEN cDNA 4930453N24 gene	protein-coding
common_peak2-30158-19-12-0.702247608520594-0.840839978588874	chr6	146927890	146928462	+	0	NA	intron (NM_001170433, intron 4 of 27)	intron (NM_001170433, intron 4 of 27)	-25233	NM_028509	73344	Mm.391543	NM_028509	ENSMUSG00000040163	1700034J05Rik	-	RIKEN cDNA 1700034J05 gene	protein-coding
common_peak2-20337-10-13--0.450939577048835-0.386243247519795	chr10	4611718	4612347	+	0	NA	Intergenic	Intergenic	70956	NM_025995	67141	Mm.197520	NM_025995	ENSMUSG00000019773	Fbxo5	2510044I10Rik|C85305|Emi1|Fbxo31	F-box protein 5	protein-coding
common_peak1-12609-20-34--0.641208232353773-0.863762398024911	chr18	25754061	25754575	+	0	NA	intron (NM_001146294, intron 2 of 12)	intron (NM_001146294, intron 2 of 12)	158166	NM_133195	108013	Mm.266435	NM_133195	ENSMUSG00000024268	Celf4	A230070D14Rik|BRUNOL-4|Brul4|Brunol4|C130060B05Rik	CUGBP, Elav-like family member 4	protein-coding
unique_peak1-3221-7-4-0.477162735410827-1.09384600808989	chr18	60632011	60632525	+	0	NA	Intergenic	MTB|LTR|MaLR	29369	NM_134133	106878	Mm.273197	NM_134133	ENSMUSG00000038059	Smim3	2010002N04Rik|AI195350|AW561905|Nid67|cI-41	small integral membrane protein 3	protein-coding
common_peak2-28271-41-64--0.321219108179794-0.571074946341596	chr4	128727049	128728448	+	0	NA	Intergenic	Intergenic	-7767	NM_029219	75234	Mm.259672	NM_029219	ENSMUSG00000028793	Rnf19b	4930534K13Rik|4930555L03Rik|Ibrdc3	ring finger protein 19B	protein-coding
unique_peak1-5228-7-0-2.79909083029819-2.40823996531185	chr5	39693932	39694454	+	0	NA	Intergenic	MLT1A0|LTR|MaLR	300620	NR_045416	75095	Mm.332354	NR_045416		4930513D17Rik	-	RIKEN cDNA 4930513D17 gene	ncRNA
common_peak2-30775-14-11-0.314253659636488-0.435191258261915	chr7	126376920	126377429	+	0	NA	Intergenic	B1_Mur2|SINE|Alu	-49286	NM_001024138	209776	Mm.300632	NM_001024138	ENSMUSG00000066197	Gpr139	GPRg1|Gm495|PGR3	G protein-coupled receptor 139	protein-coding
common_peak2-27121-6-7--0.434601889619698-0.97990265578305	chr3	18624028	18624518	+	0	NA	Intergenic	Intergenic	-243796	NR_040544	73959	Mm.60616	NR_040544		4930433B08Rik	-	RIKEN cDNA 4930433B08 gene	ncRNA
unique_peak1-2725-10-2-1.77145284428761-2.09384600808989	chr16	93607830	93608381	+	0	NA	promoter-TSS (NM_007620)	promoter-TSS (NM_007620)	23	NM_007620	12408	Mm.26940	NM_007620	ENSMUSG00000051483	Cbr1	AW261796|CR|Cbr	carbonyl reductase 1	protein-coding
common_peak2-20769-19-21--0.0567442919756109-0.301029995663971	chr10	116994776	116995758	+	0	NA	Intergenic	Intergenic	-71289	NM_027468	70574	Mm.339332	NM_027468	ENSMUSG00000020183	Cpm	1110060I01Rik|5730456K23Rik|AA589379|E030045M14Rik	carboxypeptidase M	protein-coding
unique_peak2-33302-5-8--0.874305337448166-1.10484139239135	chr11	4096802	4097332	+	0	NA	intron (NM_134023, intron 1 of 8)	L2c|LINE|L2	10231	NM_134023	103724	Mm.28140	NM_134023	ENSMUSG00000034412	Tbc1d10a	AI447804|EPI64|Tbc1d10|mFLJ00288	TBC1 domain family, member 10a	protein-coding
common_peak1-16078-29-47--0.472672420106045-0.683734619884041	chr5	53998390	53999504	+	0	NA	intron (NM_001277116, intron 3 of 12)	intron (NM_001277116, intron 3 of 12)	17222	NM_001080927	19664	Mm.209292	NM_009035	ENSMUSG00000039191	Rbpj	AI843960|CBF1|Igkjrb|Igkrsbp|RBP-J|RBP-J kappa|RBPjk|Rbpsuh	recombination signal binding protein for immunoglobulin kappa J region	protein-coding
common_peak1-8038-16-12-0.417823924126969-0.489164546851866	chr1	171258787	171259506	+	0	NA	Intergenic	B4|SINE|B4	202449	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
common_peak1-17820-16-16-0.0308008010177225-0.307611222530525	chr7	102686708	102687496	+	0	NA	Intergenic	Intergenic	-672045	NM_011858	23966	Mm.254610	NM_011858	ENSMUSG00000048078	Tenm4	Doc4|ELM2|Odz4|R75022|Ten-m4|l(7)-3Rn|l7Rn3|mKIAA1302	teneurin transmembrane protein 4	protein-coding
unique_peak1-353-21-4-2.24756117037887-3.74275476306371	chr1	136227685	136228516	+	0	NA	intron (NM_001144855, intron 1 of 28)	intron (NM_001144855, intron 1 of 28)	1405	NM_001144855	68507	Mm.295105	NM_001144855	ENSMUSG00000026458	Ppfia4	1110008G13Rik|AI448359|AI852265|C81506	protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4	protein-coding
common_peak2-31706-12-11-0.0638134843664826-0.337263207250336	chr9	73039682	73040270	+	0	NA	Intergenic	Intergenic	78700	NM_198609	225215	Mm.379366	NM_198609	ENSMUSG00000032215	Rsl24d1	2410159K22Rik	ribosomal L24 domain containing 1	protein-coding
unique_peak1-1476-9-1-2.18961340640422-2.31132995230379	chr12	112578227	112578668	+	0	NA	intron (NM_183016, intron 3 of 36)	intron (NM_183016, intron 3 of 36)	37482	NM_183016	217866	Mm.27397	NM_183016	ENSMUSG00000021279	Cdc42bpb	MRCKb	CDC42 binding protein kinase beta	protein-coding
common_peak2-31107-28-26-0.298071617657994-0.481798116163919	chr8	31167998	31169135	+	0	NA	Intergenic	Intergenic	-510301	NR_045856	71314	Mm.158666	NR_045856	ENSMUSG00000097044	4933433F19Rik	-	RIKEN cDNA 4933433F19 gene	ncRNA
unique_peak1-7416-8-3-1.00522241794757-1.39487600375387	chrX	139871066	139871431	+	0	NA	Intergenic	MTEa|LTR|MaLR	-42443	NM_001114385	83453	Mm.157697	NM_031258	ENSMUSG00000031283	Chrdl1	CHL|CHL1|Nrln1|VOPT	chordin-like 1	protein-coding
common_peak2-23103-19-9-1.08075923177432-1.37307999835977	chr14	78330373	78330914	+	0	NA	intron (NM_178825, intron 3 of 6)	intron (NM_178825, intron 3 of 6)	26597	NM_029495	108670	Mm.68134	NM_029495	ENSMUSG00000022014	Epsti1	2310046K10Rik|5033415K03Rik|BRESI1	epithelial stromal interaction 1 (breast)	protein-coding
common_peak1-16133-7-5-0.214128329577033-1.01466476204226	chr5	72636680	72637093	+	0	NA	intron (NR_003966, intron 5 of 22)	intron (NR_003966, intron 5 of 22)	42304	NM_153389	231287	Mm.32775	NM_153389	ENSMUSG00000046808	Atp10d	9830145H18Rik|ATPVD|D5Buc24e	ATPase, class V, type 10D	protein-coding
common_peak1-15966-33-27-0.523982640467925-0.852249209606516	chr5	31526279	31527590	+	0	NA	intron (NR_105788, intron 5 of 7)	ID_B1|SINE|B4	-4016	NM_008014	14208	Mm.14501	NM_008014	ENSMUSG00000029147	Ppm1g	AI385652|Fin13	protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform	protein-coding
unique_peak1-3733-7-1-1.79909083029819-1.80617997398389	chr19	46871621	46872057	+	0	NA	intron (NM_001102471, intron 1 of 6)	intron (NM_001102471, intron 1 of 6)	35740	NM_001102471	94219	Mm.306903	NM_033569	ENSMUSG00000064105	Cnnm2	AU015877|AW048635|Acdp2|Clp2	cyclin M2	protein-coding
unique_peak1-3339-9-5-0.604650905683064-1.21398586181642	chr18	88924392	88924922	+	0	NA	Intergenic	RLTR17|LTR|ERVK	138942	NM_018821	54607	Mm.91920	NM_018821	ENSMUSG00000056153	Socs6	1500012M23Rik|5830401B18Rik|AI447482|Cis4|Cish4|HSPC060|SOCS-4|SOCS-6|SSI4|STAI4|STATI4|Socs4	suppressor of cytokine signaling 6	protein-coding
common_peak1-17240-46-97--0.716713900866407-2.2124271335037	chr6	128361929	128363231	+	0	NA	intron (NM_133927, intron 9 of 11)	B3|SINE|B2	12348	NM_133927	101142	Mm.31345	NM_133927	ENSMUSG00000001518	Itfg2	2700050P07Rik|AI646725	integrin alpha FG-GAP repeat containing 2	protein-coding
common_peak2-21180-7-6--0.00826409175941478-0.97990265578305	chr11	59964847	59965283	+	0	NA	intron (NM_009021, intron 2 of 5)	B2_Mm1t|SINE|B2	11481	NM_001037764	19377	Mm.296366	NM_009021	ENSMUSG00000062115	Rai1	Gt1	retinoic acid induced 1	protein-coding
unique_peak2-36372-3-7--1.41398308995928-1.23214870625617	chr2	115608618	115609073	+	0	NA	Intergenic	Intergenic	144384	NR_035476	100316703		NR_035476		Mir1951	mmu-mir-1951	microRNA 1951	ncRNA
common_peak1-15138-50-116--0.829424403104452-3.32252308931086	chr3	144204061	144206213	+	0	NA	intron (NM_011828, intron 1 of 6)	intron (NM_011828, intron 1 of 6)	28043	NM_011828	23908	Mm.12863	NM_011828	ENSMUSG00000040151	Hs2st1	AW214369|Hs2st|mKIAA0448	heparan sulfate 2-O-sulfotransferase 1	protein-coding
unique_peak2-34266-1-6--2.43441193227435-1.56314192529759	chr13	66007592	66007831	+	0	NA	Intergenic	MMSAT4|Satellite|Satellite	-206678	NM_001177832	628709	Mm.390595	NM_001177832	ENSMUSG00000095909	Gm10324	ENSMUSG00000071302	predicted gene 10324	protein-coding
common_peak2-27239-34-54--0.399291186523394-0.62760443475974	chr3	52088415	52089664	+	0	NA	intron (NM_019739, intron 1 of 2)	intron (NM_019739, intron 1 of 2)	16780	NM_019739	56458	Mm.29891	NM_019739	ENSMUSG00000044167	Foxo1	AI876417|Afxh|FKHR|Fkhr1|Foxo1a	forkhead box O1	protein-coding
common_peak2-27808-12-7-0.648775985087639-0.697979855752659	chr3	144506909	144507355	+	0	NA	intron (NM_139148, intron 5 of 13)	intron (NM_139148, intron 5 of 13)	5134	NM_139148	229927	Mm.290600	NM_139148	ENSMUSG00000037033	Clca4	-	chloride channel calcium activated 4	protein-coding
unique_peak2-33530-7-20--1.59322659248057-1.71830443967823	chr11	76846101	76847005	+	0	NA	TTS (NM_010484)	TTS (NM_010484)	34454	NM_010484	15567	Mm.300318	NM_010484	ENSMUSG00000020838	Slc6a4	5-HTT|AI323329|Htt|Sert	solute carrier family 6 (neurotransmitter transporter, serotonin), member 4	protein-coding
common_peak2-31579-18-32--0.731474968130102-0.907815120698057	chr8	119910755	119911638	+	0	NA	intron (NM_001163262, intron 3 of 20)	intron (NM_001163262, intron 3 of 20)	38126	NM_028941	74440	Mm.233181	NM_028941	ENSMUSG00000034390	Cmip	4933407C03Rik|5830471E12Rik|AI314065|AI464126	c-Maf inducing protein	protein-coding
unique_peak2-35423-2-7--1.91745425626332-1.45399745587252	chr17	34603209	34603692	+	0	NA	Intergenic	Intergenic	9432	NM_030746	632126	Mm.484958	NM_030746	ENSMUSG00000058435	Btnl4	Btn3a3|EG632126|NG11	butyrophilin-like 4	protein-coding
unique_peak1-7015-10-0-3.35641534500877-3.31132995230379	chr8	124273628	124274141	+	0	NA	intron (NM_020605, intron 1 of 4)	intron (NM_020605, intron 1 of 4)	19425	NM_020605	57340	Mm.306870	NM_020605	ENSMUSG00000025318	Jph3	JP-3|Jp3	junctophilin 3	protein-coding
common_peak1-15011-77-112--0.0356523828591904-0.304942611491146	chr3	113629529	113631199	+	0	NA	Intergenic	L1Md_T|LINE|L1	-103094	NM_007729	12814	Mm.209715	NM_007729	ENSMUSG00000027966	Col11a1	C530001D20Rik|cho	collagen, type XI, alpha 1	protein-coding
common_peak1-7514-40-16-1.57151284150076-4.47502662768491	chr1	20862805	20864082	+	0	NA	Intergenic	Intergenic	17111	NR_040492	77741	Mm.159984	NR_040492	ENSMUSG00000097934	6720483E21Rik	-	RIKEN cDNA 6720483E21 gene	ncRNA
common_peak1-18230-31-36-0.0157853051841732-0.304004708442489	chr8	26158020	26159308	+	0	NA	intron (NM_031257, intron 10 of 11)	Charlie1a|DNA|MER1_type	-9230	NM_001081187	330723	Mm.334452	NM_001081187		Htra4	B430206E18Rik	HtrA serine peptidase 4	protein-coding
unique_peak2-34174-5-6--0.511735258063458-0.947717972411649	chr13	33078451	33078834	+	0	NA	Intergenic	MYSERV6-int|LTR|ERVK	-17768	NM_009256	20723	Mm.272569	NM_009256	ENSMUSG00000045827	Serpinb9	BB283241|CAP-3|CAP3|PI-9|PI9|Spi6|ovalbumin	serine (or cysteine) peptidase inhibitor, clade B, member 9	protein-coding
unique_peak1-6237-9-1-2.18961340640422-2.31132995230379	chr7	16175314	16175925	+	0	NA	Intergenic	Intergenic	43013	NM_027802	71468	Mm.415195	NM_027802	ENSMUSG00000054310	Obox1	7420700M11Rik|AU015708|AU024152	oocyte specific homeobox 1	protein-coding
common_peak2-24340-59-128--0.685863254550676-2.72817049580026	chr17	4907766	4908951	+	0	NA	Intergenic	CpG	-86716	NM_001085355	239985	Mm.133401	NM_001085355	ENSMUSG00000069729	Arid1b	8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235	AT rich interactive domain 1B (SWI-like)	protein-coding
common_peak1-9487-19-30--0.551508983725189-0.647723624534446	chr11	107011912	107012885	+	0	NA	Intergenic	B1_Mur4|SINE|Alu	-19162	NM_176850	207165	Mm.343986	NM_176850	ENSMUSG00000040481	Bptf	9430093H17Rik|Falz	bromodomain PHD finger transcription factor	protein-coding
common_peak1-18684-25-36--0.347603460283844-0.465043498729215	chr8	120101111	120102186	+	0	NA	intron (NM_172285, intron 9 of 32)	intron (NM_172285, intron 9 of 32)	79457	NM_172285	234779	Mm.192699	NM_172285	ENSMUSG00000034330	Plcg2	PLCgamma2|Plcg-2	phospholipase C, gamma 2	protein-coding
common_peak1-13027-22-12-0.946844386946312-1.31435121412491	chr19	5456292	5457304	+	0	NA	TTS (NM_010235)	TTS (NM_010235)	765	NM_198616	240514	Mm.329657	NM_198616		Ccdc85b	AI842788|BB115872	coiled-coil domain containing 85B	protein-coding
unique_peak1-7331-11-5-0.923731083530457-1.477227296591	chr9	123288212	123288902	+	0	NA	intron (NM_153168, intron 3 of 20)	B3|SINE|B2	12499	NM_153168	102436	Mm.276076	NM_153168	ENSMUSG00000035202	Lars2	AI035546|Kiaa0028|LEURS	leucyl-tRNA synthetase, mitochondrial	protein-coding
unique_peak2-33507-6-6--0.241956811677302-0.947717972411649	chr11	73322327	73322702	+	0	NA	Intergenic	RLTR17|LTR|ERVK	8185	NM_146443	258435	Mm.377500	NM_146443	ENSMUSG00000095312	Olfr382	MOR135-14	olfactory receptor 382	protein-coding
common_peak2-26939-12-13--0.158578936969966-0.301029995663979	chr2	164442482	164443195	+	0	NA	exon (NM_001012725, exon 3 of 4)	exon (NM_001012725, exon 3 of 4)	3638	NM_001012725	433502	Mm.376157	NM_001012725	ENSMUSG00000070531	Wfdc6b	WAP6b|Wfdc6	WAP four-disulfide core domain 6B	protein-coding
common_peak1-9377-24-27--0.0141450192898871-0.304978344874324	chr11	98399855	98400686	+	0	NA	intron (NM_011771, intron 1 of 7)	B3A|SINE|B2	7075	NM_011771	22780	Mm.133367	NM_011771	ENSMUSG00000018168	Ikzf3	5830411O07Rik|Aiolos|Zfpn1a3|Znfn1a3	IKAROS family zinc finger 3	protein-coding
common_peak2-27997-28-36--0.156494245807488-0.329362479200675	chr4	45342001	45342969	+	0	NA	Intergenic	Intergenic	-9010	NM_025513	66362	Mm.275788	NM_025513	ENSMUSG00000028322	Exosc3	2310005D06Rik|AI593501|Rrp40	exosome component 3	protein-coding
common_peak1-16637-121-117-0.684722732516157-4.10668739834845	chr6	50380322	50384048	+	0	NA	intron (NM_001163645, intron 1 of 21)	intron (NM_001163645, intron 1 of 21)	23984	NM_001163645	71720	Mm.44153	NM_027881	ENSMUSG00000029822	Osbpl3	1200014M06Rik|6720421I08Rik|A530055M08|ORP3|OSBP3	oxysterol binding protein-like 3	protein-coding
common_peak2-26298-10-12--0.344024373132323-0.340565874754526	chr2	32167639	32168082	+	0	NA	exon (NM_010065, exon 20 of 21)	exon (NM_010065, exon 20 of 21)	-6120	NR_029811	387239		NR_029811	miRBase:MI0000714	Mir199b	Mirn199b	microRNA 199b	ncRNA
unique_peak2-39784-3-8--1.58390809140159-1.39487600375387	chrX	10716884	10717278	+	0	NA	Intergenic	LTR16A|LTR|ERVL	-159302	NM_001111037	100042922	Mm.374311	NM_001111037	ENSMUSG00000095208	Gm14483	OTTMUSG00000016789	predicted gene 14483	protein-coding
unique_peak1-55-13-3-1.77847203063777-2.58603100924543	chr1	31156258	31156777	+	0	NA	Intergenic	Intergenic	-76763	NM_153601	266744	Mm.389093	NM_153601	ENSMUSG00000050217	Lgsn	Gluld1|Lgs|lengsin	lengsin, lens protein with glutamine synthetase domain	protein-coding
unique_peak1-2272-7-1-1.79909083029819-1.80617997398389	chr15	78387975	78388368	+	0	NA	Intergenic	Intergenic	-13396	NM_009218	20607	Mm.211411	NM_009218	ENSMUSG00000044933	Sstr3	Smstr-3|Smstr3|sst3	somatostatin receptor 3	protein-coding
common_peak2-20633-17-40--1.13925566641305-1.9602491241746	chr10	80622695	80623452	+	0	NA	intron (NM_021501, intron 2 of 10)	intron (NM_021501, intron 2 of 10)	7392	NM_021501	59004	Mm.34428	NM_021501		Pias4	PIASY|Pias-gamma|Piasg	protein inhibitor of activated STAT 4	protein-coding
common_peak2-24275-10-6-0.549060422951165-1.21398586181642	chr16	95779296	95779622	+	0	NA	Intergenic	MTC|LTR|MaLR	-27487	NM_133659	13876	Mm.164531	NM_133659	ENSMUSG00000040732	Erg	D030036I24Rik	avian erythroblastosis virus E-26 (v-ets) oncogene related	protein-coding
unique_peak2-32475-5-8--0.874305337448166-1.10484139239135	chr1	34007439	34007989	+	0	NA	intron (NM_001276764, intron 2 of 102)	L1Md_A|LINE|L1	42644	NM_001276764	13518	Mm.336625	NM_010081	ENSMUSG00000026131	Dst	2310001O04Rik|A830042E19Rik|AW554249|BP230|BPAG1-n|Bpag|Bpag1|Macf2|ah|athetoid|dt|mKIAA0728|nmf203|nmf339	dystonin	protein-coding
common_peak2-27625-7-12--0.901348887842903-1.31827279259406	chr3	105059380	105059953	+	0	NA	Intergenic	Intergenic	189904	NM_029228	75269	Mm.307994	NM_029228	ENSMUSG00000051788	4930564D02Rik	-	RIKEN cDNA 4930564D02 gene	protein-coding
common_peak1-16029-57-38-0.98063082121668-3.23079036607637	chr5	36178225	36180272	+	0	NA	intron (NM_001177700, intron 9 of 16)	intron (NM_001177700, intron 9 of 16)	-56720	NM_027373	70292	Mm.125167	NM_027373	ENSMUSG00000029094	Afap1	2600003E23Rik|9630044L16Rik|AI848729|Afap|mKIAA3018	actin filament associated protein 1	protein-coding
common_peak2-26227-33-33-0.24387472127519-0.447010559430123	chr2	27505354	27506508	+	0	NA	Intergenic	Intergenic	-26790	NM_011305	20181	Mm.24624	NM_011305	ENSMUSG00000015846	Rxra	9530071D11Rik|Nr2b1|RXRalpha1	retinoid X receptor alpha	protein-coding
unique_peak2-39427-2-7--1.91745425626332-1.45399745587252	chr9	43232203	43232545	+	0	NA	Intergenic	Intergenic	113528	NM_023655	72169	Mm.273277	NM_023655	ENSMUSG00000032013	Trim29	1110047J21Rik|2810431N19Rik|4732461M22Rik|AI119726	tripartite motif-containing 29	protein-coding
common_peak1-13573-28-42--0.373305634880635-0.53611512876719	chr2	11602290	11603486	+	0	NA	intron (NM_008367, intron 4 of 7)	MTC|LTR|MaLR	-24032	NM_001271498	16169	Mm.200196	NM_008358	ENSMUSG00000023206	Il15ra	AA690181|IL-15RA	interleukin 15 receptor, alpha chain	protein-coding
common_peak1-17905-97-61-1.22980476110541-7.9600419661266	chr7	123096734	123098876	+	0	NA	intron (NM_001025559, intron 1 of 15)	intron (NM_001025559, intron 1 of 15)	40795	NM_011445	20679	Mm.323365	NM_011445	ENSMUSG00000051910	Sox6	AI987981|SOX-LZ	SRY (sex determining region Y)-box 6	protein-coding
common_peak2-22747-47-26-1.17995392260308-3.44689162350861	chr13	111807901	111809018	+	0	NA	Intergenic	Intergenic	211180	NR_045908	73129	Mm.417826	NR_045908		3110015C05Rik	-	RIKEN cDNA 3110015C05 gene	ncRNA
common_peak2-21685-102-105-0.543168022276356-2.32622738674981	chr11	104441386	104443166	+	0	NA	intron (NM_010858, intron 4 of 8)	MamRep488|DNA|hAT	-27038	NM_016780	16416	Mm.87150	NM_016780	ENSMUSG00000020689	Itgb3	CD61|GP3A|INGRB3	integrin beta 3	protein-coding
common_peak1-19435-8-18--1.24270509549601-1.15812782348128	chrX	94151988	94152547	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-115668	NM_001033361	245526	Mm.336164	NM_001033361	ENSMUSG00000031212	Pgr15l	-	G protein-coupled receptor 15-like	protein-coding
common_peak2-30391-14-8-0.729291158915332-0.771068449301682	chr7	30625559	30626175	+	0	NA	Intergenic	B2_Mm2|SINE|B2	12800	NM_173738	233057	Mm.296864	NM_173738	ENSMUSG00000050855	Zfp940	-	zinc finger protein 940	protein-coding
unique_peak2-33924-1-4--1.94898510510411-1.10720996964787	chr12	69548101	69548527	+	0	NA	Intergenic	L1Md_F|LINE|L1	711859	NM_009093	20090	Mm.379006	NM_009093	ENSMUSG00000034892	Rps29	-	ribosomal protein S29	protein-coding
common_peak2-29098-18-11-0.727956650507195-0.876666802405043	chr5	122511338	122511905	+	0	NA	Intergenic	(TATATG)n|Simple_repeat|Simple_repeat	-13787	NM_007804	13048	Mm.156172	NM_007804	ENSMUSG00000042589	Cux2	1700051K22Rik|Cutl2|Cux-2|ENSMUSG00000072641	cut-like homeobox 2	protein-coding
unique_peak1-4149-12-5-1.06381348436648-1.78669045979184	chr2	94449955	94450510	+	0	NA	Intergenic	Lx3A|LINE|L1	-171928	NM_007466	11800	Mm.181824	NM_007466	ENSMUSG00000027193	Api5	AAC-11|AI196452	apoptosis inhibitor 5	protein-coding
common_peak2-24734-6-23--2.01956439034085-2.6100056615562	chr17	47629143	47629796	+	0	NA	intron (NM_022015, intron 7 of 8)	intron (NM_022015, intron 7 of 8)	9767	NM_022015	63856	Mm.275901	NM_022015	ENSMUSG00000023980	Taf8	AW260255|Tbn	TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factorq	protein-coding
common_peak2-29380-22-24-0.00342791531268016-0.305461879681376	chr6	29211664	29212701	+	0	NA	Intergenic	Intergenic	-10306	NM_001190461	69573	Mm.45161	NM_023516	ENSMUSG00000043421	Hilpda	2310016C08Rik|AW049004|Hig2	hypoxia inducible lipid droplet associated	protein-coding
common_peak1-15152-24-62--1.1840700207322-3.16061338235695	chr3	145924221	145925240	+	0	NA	intron (NM_022983, intron 2 of 2)	intron (NM_022983, intron 2 of 2)	40805	NM_022983	65086	Mm.155520	NM_022983	ENSMUSG00000036832	Lpar3	Edg7|lpA3	lysophosphatidic acid receptor 3	protein-coding
common_peak2-28306-13-12-0.0780323124966764-0.334470287753051	chr4	132946091	132946562	+	0	NA	intron (NM_016981, intron 1 of 11)	intron (NM_016981, intron 1 of 11)	20635	NR_039582	100628620		NR_039582	miRBase:MI0018031	Mir5122	mmu-mir-5122|mu-mir-5122	microRNA 5122	ncRNA
unique_peak2-35585-3-6--1.22133801201688-1.08602067057793	chr17	73970268	73970564	+	0	NA	intron (NM_027864, intron 1 of 14)	L2a|LINE|L2	89375	NM_027864	71685	Mm.271953	NM_027864	ENSMUSG00000024064	Galnt14	0610033M06Rik	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 14	protein-coding
unique_peak1-1986-16-3-2.11826364226806-2.65002542325363	chr15	64224985	64225714	+	0	NA	Intergenic	ID4_|SINE|ID	-10868	NM_010026	13196	Mm.277236	NM_010026	ENSMUSG00000022377	Asap1	AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19	ArfGAP with SH3 domain, ankyrin repeat and PH domain1	protein-coding
common_peak2-20877-38-48--0.0432571848166781-0.301029995664001	chr11	109362729	109363612	+	0	NA	intron (NM_028710, intron 4 of 13)	RSINE1|SINE|B4	-28260	NM_001029842	104681	Mm.265874	NM_134038	ENSMUSG00000041920	Slc16a6	AW743111|ESTM12|MCT 6|MCT 7|MCT6	solute carrier family 16 (monocarboxylic acid transporters), member 6	protein-coding
common_peak1-13848-49-31-1.00628382302518-2.84286792513288	chr2	60901505	60902988	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-89038	NR_045335	100038493	Mm.388076	NR_045335	ENSMUSG00000075325	Gm13582	ENSMUSG00000075325|OTTMUSG00000012844	predicted gene 13582	ncRNA
unique_peak1-2763-17-5-1.63333383748388-2.19184853030482	chr17	5800992	5801667	+	0	NA	non-coding (NR_045081, exon 2 of 3)	non-coding (NR_045081, exon 2 of 3)	1839	NR_045080	78512	Mm.23696	NR_045079	ENSMUSG00000096965	3300005D01Rik	-	RIKEN cDNA 3300005D01 gene	ncRNA
unique_peak1-552-17-7-1.21829633820504-1.55050753388977	chr1	193408562	193409256	+	0	NA	intron (NM_178632, intron 3 of 19)	intron (NM_178632, intron 3 of 19)	9296	NM_178632	77065	Mm.338175	NM_178632	ENSMUSG00000037461	Ints7	5930412E23Rik	integrator complex subunit 7	protein-coding
common_peak1-13632-10-8-0.186490343566457-1.078512453669	chr2	25365052	25365601	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-8087	NM_001271777	69379	Mm.24596	NM_027062	ENSMUSG00000015083	C8g	-	complement component 8, gamma polypeptide	protein-coding
common_peak1-12006-32-71--0.890832982222652-2.35199658438495	chr17	13760338	13761563	+	0	NA	Intergenic	Intergenic	-13990	NR_045437	72578	Mm.46549	NR_045436	ENSMUSG00000038347	2700054A10Rik	-	RIKEN cDNA 2700054A10 gene	ncRNA
unique_peak1-2104-10-4-1.03448725012141-1.5150158574804	chr15	39556947	39557459	+	0	NA	Intergenic	PB1|SINE|Alu	-20273	NM_001289506	75766	Mm.159563	NM_029422	ENSMUSG00000022303	Dcstamp	4833414I07Rik|DC-STAMP|FIND|Tm7sf4|mDC-STAMP	dentrocyte expressed seven transmembrane protein	protein-coding
unique_peak2-35096-8-6-0.197867495889966-1.03789460276074	chr16	20610451	20610906	+	0	NA	promoter-TSS (NM_025462)	promoter-TSS (NM_025462)	144	NM_145939	208624	Mm.24950	NM_145939	ENSMUSG00000033809	Alg3	D16Ertd36e	asparagine-linked glycosylation 3 (alpha-1,3-mannosyltransferase)	protein-coding
unique_peak1-674-12-6-0.841421063030034-1.58711810488664	chr10	67784871	67785550	+	0	NA	Intergenic	(TCTA)n|Simple_repeat|Simple_repeat	-1320	NR_045357	75148	Mm.23505	NR_045357		4930545H06Rik	-	RIKEN cDNA 4930545H06 gene	ncRNA
common_peak1-17943-19-27--0.404667595395917-0.464317215211849	chr7	127471327	127472133	+	0	NA	promoter-TSS (NM_177213)	promoter-TSS (NM_177213)	-468	NM_177213	320631	Mm.78330	NM_177213	ENSMUSG00000054746	Abca15	4930500I12Rik	ATP-binding cassette, sub-family A (ABC1), member 15	protein-coding
unique_peak1-106-8-1-2.00522241794757-2.05605744720049	chr1	54712523	54712962	+	0	NA	intron (NM_001081433, intron 23 of 27)	intron (NM_001081433, intron 23 of 27)	-98214	NM_001163314	241062	Mm.103539	NM_175508	ENSMUSG00000073678	Pgap1	5033403E17Rik|9030223K07Rik|A530084K22|D230012E17Rik|oto	post-GPI attachment to proteins 1	protein-coding
common_peak2-31227-6-12--1.13504160776079-1.45089835786865	chr8	69901848	69902396	+	0	NA	Intergenic	Lx7|LINE|L1	-112535	NM_008673	17960	Mm.14125	NM_008673	ENSMUSG00000025588	Nat1	Nat-1	N-acetyl transferase 1	protein-coding
common_peak2-31205-5-7--0.704380336005853-1.01466476204226	chr8	61488515	61488840	+	0	NA	Intergenic	L1Md_F2|LINE|L1	98125	NM_173411	234290	Mm.39244	NM_173411	ENSMUSG00000049946	BC030500	-	cDNA sequence BC030500	protein-coding
common_peak2-32335-5-7--0.704380336005853-1.01466476204226	chrX	74270949	74271247	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	-422835	NM_001201395	74987	Mm.107996	NM_001201395	ENSMUSG00000079525	4930468A15Rik	-	RIKEN cDNA 4930468A15 gene	protein-coding
common_peak2-28647-21-12-0.869049547125143-1.18646456559501	chr5	30618439	30618921	+	0	NA	intron (NM_001033460, intron 1 of 16)	intron (NM_001033460, intron 1 of 16)	10766	NM_001033460	381738	Mm.389604	NM_001033460	ENSMUSG00000073102	Drc1	Ccdc164|Gm1060|b2b1654Clo	dynein regulatory complex subunit 1	protein-coding
unique_peak2-33642-8-23--1.57974008277359-1.94520747672513	chr11	98782765	98783449	+	0	NA	3' UTR (NM_011799, exon 12 of 12)	3' UTR (NM_011799, exon 12 of 12)	13642	NM_011799	23834	Mm.20912	NM_011799	ENSMUSG00000017499	Cdc6	CDC18L	cell division cycle 6	protein-coding
unique_peak1-186-8-1-2.00522241794757-2.05605744720049	chr1	75337333	75337813	+	0	NA	Intergenic	PB1D10|SINE|Alu	-19294	NM_010043	13346	Mm.6712	NM_010043		Des	-	desmin	protein-coding
unique_peak2-34129-7-34--2.33019218664678-4.50509115191453	chr13	22035054	22035557	+	0	NA	Intergenic	RMER4A|LTR|ERVK	-1658	NM_183014	193452	Mm.187446	NM_183014	ENSMUSG00000006720	Zfp184	4930500C15Rik	zinc finger protein 184 (Kruppel-like)	protein-coding
common_peak1-13306-47-51-0.234401706625456-0.495169887621104	chr19	41454399	41456168	+	0	NA	intron (NM_031376, intron 1 of 16)	L1MC4|LINE|L1	4277	NM_031376	83490	Mm.222266	NM_031376	ENSMUSG00000025017	Pik3ap1	1810044J04Rik|BCAP	phosphoinositide-3-kinase adaptor protein 1	protein-coding
common_peak1-10607-9-11--0.395349094316936-0.344532117358383	chr14	31964705	31965149	+	0	NA	intron (NM_138672, intron 27 of 68)	intron (NM_138672, intron 27 of 68)	16888	NM_027289	70021	Mm.261681	NM_027289	ENSMUSG00000071547	Nt5dc2	2510015F01Rik	5'-nucleotidase domain containing 2	protein-coding
common_peak2-23760-16-20--0.274053780510699-0.353907621462756	chr15	98048562	98049220	+	0	NA	intron (NM_001011780, intron 1 of 2)	(CAA)n|Simple_repeat|Simple_repeat	2596	NM_001011780	634104	Mm.259785	NM_001011780	ENSMUSG00000090129	Olfr287	MOR286-1	olfactory receptor 287	protein-coding
common_peak1-17353-53-48-0.52626316830072-1.27243322704912	chr7	16923892	16924862	+	0	NA	intron (NM_001285891, intron 6 of 9)	intron (NM_001285891, intron 6 of 9)	29445	NM_133234	170770	Mm.7660	NM_133234	ENSMUSG00000002083	Bbc3	PUMA|PUMA/JFY1	BCL2 binding component 3	protein-coding
common_peak1-15212-18-11-0.727956650507195-0.876666802405043	chr4	125124238	125125198	+	0	NA	Intergenic	Intergenic	-43357	NM_001081097	14807	Mm.40896	NM_001081097	ENSMUSG00000001985	Grik3	9630027E11|GluK3|GluR7-3|Glur-7|Glur7	glutamate receptor, ionotropic, kainate 3	protein-coding
common_peak1-16619-23-36--0.48768586111987-0.652802052802678	chr6	38534684	38535553	+	0	NA	exon (NM_138680, exon 3 of 10)	exon (NM_138680, exon 3 of 10)	33674	NM_001170848	192196	Mm.276133	NM_138680	ENSMUSG00000029823	Luc7l2	4930471C18Rik|AA522013|AU015269|CGI59|Cgi74	LUC7-like 2 (S. cerevisiae)	protein-coding
common_peak2-20049-24-13-0.985854980710112-1.52081014994907	chr1	149862446	149863269	+	0	NA	Intergenic	Lx3C|LINE|L1	1518040	NM_001145807	215378	Mm.441817	NM_153539	ENSMUSG00000035131	Brinp3	B830045N13Rik|Fam5c	bone morphogenetic protein/retinoic acid inducible neural specific 3	protein-coding
unique_peak2-36542-7-8--0.370834171144123-1.00793137938329	chr2	165387928	165388305	+	0	NA	Intergenic	Intergenic	-32412	NM_001271963	14049	Mm.282719	NM_010165	ENSMUSG00000017897	Eya2	Eab1	eyes absent 2 homolog (Drosophila)	protein-coding
unique_peak2-39431-4-11--1.6084230145744-1.68134727924692	chr9	44478932	44479610	+	0	NA	Intergenic	Intergenic	-2045	NM_001277851	58866	Mm.45380	NM_021481	ENSMUSG00000032098	Treh	2210412M19Rik	trehalase (brush-border membrane glycoprotein)	protein-coding
unique_peak1-2630-8-0-3.00522241794757-2.70926996097583	chr16	42807325	42807811	+	0	NA	intron (NR_040522, intron 1 of 1)	ORR1A3-int|LTR|MaLR	68132	NR_040521	75722	Mm.243747	NR_040521	ENSMUSG00000075070	4932412D23Rik	ENSMUSG00000075070|Gm10809	RIKEN cDNA 4932412D23 gene	ncRNA
common_peak2-27688-45-81--0.497193979273212-1.13125231345915	chr3	121426427	121428075	+	0	NA	intron (NM_010171, intron 1 of 5)	intron (NM_010171, intron 1 of 5)	796	NM_010171	14066	Mm.273188	NM_010171	ENSMUSG00000028128	F3	AA409063|CD142|Cf-3|Cf3|TF	coagulation factor III	protein-coding
unique_peak1-4444-11-2-1.92373108353046-2.32232533660526	chr2	170446132	170446715	+	0	NA	Intergenic	Intergenic	-18906	NR_027825	67637	Mm.158163	NM_026287	ENSMUSG00000043583	4930470P17Rik	-	RIKEN cDNA 4930470P17 gene	ncRNA
common_peak1-19210-26-20-0.535581669379702-0.738267116931592	chr9	105395295	105396225	+	0	NA	intron (NM_001253831, intron 1 of 26)	intron (NM_001253831, intron 1 of 26)	1703	NM_175025	235574	Mm.326247	NM_175025	ENSMUSG00000032570	Atp2c1	1700121J11Rik|ATP2C1A|AW061228|BCPM|D930003G21Rik|HHD|SPCA|pmr1	ATPase, Ca++-sequestering	protein-coding
common_peak2-30727-16-19--0.203664452619301-0.325169893479371	chr7	114275422	114276097	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-2763	NM_146780	258776	Mm.223207	NM_146780	ENSMUSG00000060503	Olfr715	MOR260-1	olfactory receptor 715	protein-coding
common_peak2-31273-7-8--0.370834171144123-1.00793137938329	chr8	71668508	71668777	+	0	NA	Intergenic	Intergenic	-3790	NM_199364	211134	Mm.479807	NM_199364	ENSMUSG00000036306	Lzts1	F37|FEZ1	leucine zipper, putative tumor suppressor 1	protein-coding
common_peak1-11990-8-4-0.683294323060208-1.21878474469819	chr17	12317891	12318397	+	0	NA	intron (NM_026644, intron 1 of 8)	intron (NM_026644, intron 1 of 8)	5994	NM_026644	68262	Mm.258300	NM_026644	ENSMUSG00000023827	Agpat4	1500003P24Rik	1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)	protein-coding
common_peak1-18453-19-17-0.232762325219374-0.392630012299441	chr8	83740827	83741916	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-125090	NM_001024617	234515	Mm.324468	NM_001024617	ENSMUSG00000037940	Inpp4b	E130107I17Rik	inositol polyphosphate-4-phosphatase, type II	protein-coding
common_peak1-7868-20-7-1.48807478459119-2.07034318903805	chr1	133240635	133241524	+	0	NA	exon (NM_001081011, exon 10 of 23)	exon (NM_001081011, exon 10 of 23)	-64939	NM_019777	56489	Mm.386783	NM_019777	ENSMUSG00000042349	Ikbke	AW558201|IKK-i|IKKepsilon|Ikki	inhibitor of kappaB kinase epsilon	protein-coding
common_peak2-31664-33-64--0.691030250502926-1.51460024573214	chr8	126664936	126666520	+	0	NA	Intergenic	Intergenic	-89566	NM_139272	108148	Mm.33808	NM_139272	ENSMUSG00000089704	Galnt2	AI480629	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2	protein-coding
common_peak2-25708-15-6-1.20480982849805-1.32521814697968	chr19	21052255	21052674	+	0	NA	Intergenic	Intergenic	-23772	NM_028953	13409	Mm.219585	NM_028953	ENSMUSG00000024749	Tmc1	4933416G09Rik|Beethoven|Bth|CWEA1|dn	transmembrane channel-like gene family 1	protein-coding
common_peak2-31046-9-10--0.269818212233077-1.05503135781948	chr8	14964964	14965552	+	0	NA	intron (NM_172751, intron 18 of 28)	intron (NM_172751, intron 18 of 28)	-45767	NM_029116	74901	Mm.46675	NM_029116	ENSMUSG00000055675	Kbtbd11	2900016B01Rik|4930465M17Rik|mKIAA0711	kelch repeat and BTB (POZ) domain containing 11	protein-coding
common_peak1-15743-17-18--0.0296311752385474-0.306899554715732	chr4	149099127	149099823	+	0	NA	3' UTR (NM_001284273, exon 6 of 6)	3' UTR (NM_001284273, exon 6 of 6)	12404	NM_001284273	230917	Mm.266704	NM_177672	ENSMUSG00000044700	Tmem201	AV028368|D4Ertd429e|Net5|Samp1	transmembrane protein 201	protein-coding
unique_peak1-4089-10-4-1.03448725012141-1.5150158574804	chr2	71723515	71724026	+	0	NA	intron (NM_172665, intron 5 of 10)	intron (NM_172665, intron 5 of 10)	12489	NM_172665	228026	Mm.34411	NM_172665	ENSMUSG00000006494	Pdk1	B830012B01|D530020C15Rik	pyruvate dehydrogenase kinase, isoenzyme 1	protein-coding
unique_peak2-39361-9-14--0.717277189204299-0.53895475198017	chr9	8104695	8105316	+	0	NA	intron (NM_001045524, intron 4 of 10)	intron (NM_001045524, intron 4 of 10)	29289	NM_001045524	234915	Mm.101341	NM_001045524	ENSMUSG00000040729	AK129341	Kiaa1377|mKIAA1377	cDNA sequence AK129341	protein-coding
common_peak2-21486-22-20-0.254966682308644-0.421916810733237	chr11	88555761	88556675	+	0	NA	intron (NM_001201341, intron 5 of 7)	intron (NM_001201341, intron 5 of 7)	23325	NM_054043	76626	Mm.400451	NM_054043	ENSMUSG00000069769	Msi2	1700105C15Rik|AI451722|AI563628|AW489193|Msi2h	musashi RNA-binding protein 2	protein-coding
common_peak2-29002-36-32-0.434926966809301-0.779916249636873	chr5	108694225	108695147	+	0	NA	Intergenic	Lx7|LINE|L1	-3230	NM_026106	13486	Mm.303534	NM_026106	ENSMUSG00000029265	Dr1	1700121L09Rik|Dr1l|NC2|NC2beta	down-regulator of transcription 1	protein-coding
unique_peak2-33885-2-6--1.72480917832092-1.26211192963361	chr12	35534270	35534669	+	0	NA	intron (NM_001271386, intron 2 of 27)	intron (NM_001271386, intron 2 of 27)	67298	NM_001271386	79221	Mm.310551	NM_024124	ENSMUSG00000004698	Hdac9	AV022454|D030072B18Rik|HD7B|HD9|HDRP|Hdac7b|Mitr|mKIAA0744	histone deacetylase 9	protein-coding
common_peak1-14971-40-42-0.232710928049-0.490454554604827	chr3	105958340	105959642	+	0	NA	intron (NM_009892, intron 5 of 10)	intron (NM_009892, intron 5 of 10)	11491	NM_009892	12655	Mm.387173	NM_009892	ENSMUSG00000040809	Chil3	AI505981|Chi3l3|ECF-L|Ym1	chitinase-like 3	protein-coding
unique_peak1-873-23-4-2.39983940962172-4.21583923654667	chr11	30290792	30291754	+	0	NA	Intergenic	B4|SINE|B4	80556	NM_001100394	75087	Mm.159422	NM_001100394	ENSMUSG00000040919	4930505A04Rik	-	RIKEN cDNA 4930505A04 gene	protein-coding
unique_peak2-37575-5-7--0.704380336005853-1.01466476204226	chr5	36094007	36094431	+	0	NA	Intergenic	URR1B|DNA|MER1_type	-6310	NM_001177699	231148	Mm.254446	NM_177678	ENSMUSG00000029095	Ablim2	AI606905|C230091L11	actin-binding LIM protein 2	protein-coding
unique_peak1-2283-8-1-2.00522241794757-2.05605744720049	chr15	79400934	79401444	+	0	NA	intron (NR_103477, intron 7 of 8)	B4A|SINE|B4	-24018	NM_199080	67040	Mm.29644	NM_152806	ENSMUSG00000055065	Ddx17	2610007K22Rik|A430025E01Rik|AI047725|C80929|Gm926|p72	DEAD (Asp-Glu-Ala-Asp) box polypeptide 17	protein-coding
common_peak2-29589-10-11--0.228547155712387-0.31137425193576	chr6	50384394	50384990	+	0	NA	intron (NM_001163645, intron 1 of 21)	intron (NM_001163645, intron 1 of 21)	21477	NM_001163645	71720	Mm.44153	NM_027881	ENSMUSG00000029822	Osbpl3	1200014M06Rik|6720421I08Rik|A530055M08|ORP3|OSBP3	oxysterol binding protein-like 3	protein-coding
common_peak2-31866-25-42--0.564414849356992-0.820829064533854	chr9	53383859	53384818	+	0	NA	TTS (NM_001081152)	TTS (NM_001081152)	34117	NM_144784	110446	Mm.293233	NM_144784	ENSMUSG00000032047	Acat1	6330585C21Rik|Acat	acetyl-Coenzyme A acetyltransferase 1	protein-coding
common_peak2-22299-85-135--0.132059593125688-0.40250768253397	chr13	17803206	17805992	+	0	NA	Intergenic	ID_B1|SINE|B4	17352	NM_025479	66308	Mm.291109	NM_025479	ENSMUSG00000012429	Mplkip	2810021B07Rik|C330007M08Rik|Ttdn1	M-phase specific PLK1 intereacting protein	protein-coding
common_peak2-32309-26-90--1.57989554804023-7.11834344075587	chrX	51017682	51019288	+	0	NA	non-coding (NR_110489, exon 3 of 7)	non-coding (NR_110489, exon 3 of 7)	1270	NR_110489	331578	Mm.483375	NR_110489		AW822252	C230063B02	expressed sequence AW822252	ncRNA
common_peak2-30974-18-15-0.312919151228352-0.456667090758524	chr8	3392806	3393531	+	0	NA	intron (NM_133962, intron 1 of 19)	intron (NM_133962, intron 1 of 19)	160	NM_133962	102098	Mm.170461	NM_133962	ENSMUSG00000004568	Arhgef18	AI467246|D030053O22Rik	rho/rac guanine nucleotide exchange factor (GEF) 18	protein-coding
unique_peak2-35081-2-5--1.50241675698448-1.08602067057793	chr16	16911811	16912062	+	0	NA	intron (NM_176833, intron 3 of 7)	intron (NM_176833, intron 3 of 7)	15374	NM_176833	68606	Mm.230296	NM_176833	ENSMUSG00000026181	Ppm1f	1110021B16Rik|4933427B07Rik|CaMKPase|Popx2|mKIAA0015	protein phosphatase 1F (PP2C domain containing)	protein-coding
common_peak1-15379-25-21-0.402418286707809-0.580176690544129	chr4	62407821	62408771	+	0	NA	Intergenic	ORR1A2-int|LTR|MaLR	127590	NM_134257	50780	Mm.286753	NM_019492	ENSMUSG00000059810	Rgs3	4930506N09Rik|C2PA-RGS3|C2pa|PDZ-RGS3|RGS3S	regulator of G-protein signaling 3	protein-coding
unique_peak1-320-9-1-2.18961340640422-2.31132995230379	chr1	131945830	131946317	+	0	NA	intron (NM_172485, intron 15 of 27)	L1MEf|LINE|L1	373503	NM_007827	13137	Mm.436759	NM_007827	ENSMUSG00000026401	Daf2	AI323748|Cd55b|Daf|Daf-TM|TM-DAF	decay accelerating factor 2	protein-coding
unique_peak1-1173-18-9-0.990991056340989-1.23014042908325	chr11	100147831	100148656	+	0	NA	Intergenic	Intergenic	-17058	NM_212483	68239	Mm.158190	NM_212483	ENSMUSG00000053654	Krt42	2410039E07Rik|K17n|Ka22|ecat6	keratin 42	protein-coding
common_peak2-19739-16-15-0.118263642268062-0.328191099940264	chr1	74299356	74300299	+	0	NA	intron (NM_029711, intron 4 of 9)	intron (NM_029711, intron 4 of 9)	16703	NM_029711	76709	Mm.337038	NM_029711	ENSMUSG00000006304	Arpc2	2210023N03Rik|34kDa|p34-Arc	actin related protein 2/3 complex, subunit 2	protein-coding
common_peak2-22991-133-163-0.374005580065224-1.74911372281667	chr14	57745119	57746856	+	0	NA	intron (NM_001010937, intron 2 of 2)	ID_B1|SINE|B4	6461	NM_001271663	14623	Mm.25652	NM_008128	ENSMUSG00000040055	Gjb6	AA958971|Cx30|D14Bwg0506e	gap junction protein, beta 6	protein-coding
unique_peak2-35807-2-14--2.82434485187184-3.03832868024006	chr18	61550510	61551265	+	0	NA	intron (NM_133249, intron 1 of 11)	intron (NM_133249, intron 1 of 11)	9198	NM_133249	170826	Mm.415302	NM_133249	ENSMUSG00000033871	Ppargc1b	4631412G21Rik|Perc	peroxisome proliferative activated receptor, gamma, coactivator 1 beta	protein-coding
common_peak1-7810-10-17--0.813509656433543-0.699649909729472	chr1	120120293	120120823	+	0	NA	Intergenic	L1_Mus1|LINE|L1	87151	NM_011650	22099	Mm.426637	NM_011650	ENSMUSG00000026374	Tsn	2610034C24Rik|AU040286|C3PO|TB-RBP	translin	protein-coding
unique_peak2-34287-7-18--1.4488366831454-1.38887104242188	chr13	73763780	73764682	+	0	NA	promoter-TSS (NM_009354)	promoter-TSS (NM_009354)	-218	NM_009354	21752	Mm.10109	NM_009354	ENSMUSG00000021611	Tert	EST2|TCS1|TP2|TR|TRT	telomerase reverse transcriptase	protein-coding
common_peak2-32376-42-70--0.407417791637498-0.75058632931876	chrX	105928641	105929440	+	0	NA	Intergenic	B1_Mur3|SINE|Alu	100654	NM_001081477	382236	Mm.100112	NM_001081477	ENSMUSG00000063663	Brwd3	Brodl|D030064D06Rik|Gm596	bromodomain and WD repeat domain containing 3	protein-coding
common_peak2-21976-24-13-0.985854980710112-1.52081014994907	chr12	49394699	49395407	+	0	NA	Intergenic	Lx6|LINE|L1	-1088817	NM_001160112	15228	Mm.4704	NM_008241	ENSMUSG00000020950	Foxg1	2900064B05Rik|BF-1|Bf1|Hfh9|Hfhbf1	forkhead box G1	protein-coding
unique_peak1-3324-7-1-1.79909083029819-1.80617997398389	chr18	82764880	82765384	+	0	NA	3' UTR (NM_177832, exon 30 of 30)	3' UTR (NM_177832, exon 30 of 30)	41232	NM_001025254	17196	Mm.252063	NM_010777	ENSMUSG00000041607	Mbp	C76307|Hmbpr|R75289|golli-mbp|mld|shi	myelin basic protein	protein-coding
common_peak2-24212-14-6-1.09186123830004-1.16633110333236	chr16	77499961	77500282	+	0	NA	intron (NR_015543, intron 3 of 4)	intron (NR_015543, intron 3 of 4)	-99060	NR_029535	387229		NR_029535	miRBase:MI0000146	Mir99a	Mirn99a|mmu-mir-99a	microRNA 99a	ncRNA
common_peak2-29846-9-12--0.510826311736872-0.394412252720706	chr6	97278360	97278875	+	0	NA	intron (NM_145148, intron 9 of 23)	intron (NM_145148, intron 9 of 23)	-75843	NM_001081157	320502	Mm.68163	NM_001081157	ENSMUSG00000044086	Lmod3	5430424A14Rik	leiomodin 3 (fetal)	protein-coding
common_peak1-9955-17-22--0.305265617851975-0.348739088570342	chr12	111712623	111713188	+	0	NA	intron (NM_001135001, intron 3 of 13)	intron (NM_001135001, intron 3 of 13)	-11044	NM_001081457	26931	Mm.240396	NM_012023	ENSMUSG00000017843	Ppp2r5c	2610043M05Rik|2700063L20Rik|AI060890|AW545884|C85228|D12Bwg0916e|mKIAA0044	protein phosphatase 2, regulatory subunit B', gamma	protein-coding
unique_peak1-3428-10-5-0.771452844287613-1.33892459842472	chr19	6448119	6448644	+	0	NA	intron (NM_001205234, intron 4 of 22)	C-rich|Low_complexity|Low_complexity	29643	NM_001205234	18190	Mm.329616	NM_020253	ENSMUSG00000033768	Nrxn2	6430591O13Rik|mKIAA0921	neurexin II	protein-coding
unique_peak1-1909-15-3-2.01216475055566-3.03427613622886	chr14	69740765	69741420	+	0	NA	Intergenic	Intergenic	-48767	NM_010920	18092	Mm.390691	NM_010920	ENSMUSG00000044186	Nkx2-6	AV044928|Nkx-2.6|Nkx2.6|Tix|tinman	NK2 homeobox 6	protein-coding
unique_peak2-38770-11-14--0.398197011356905-0.379391706698377	chr7	127013818	127014614	+	0	NA	intron (NM_001163703, intron 1 of 2)	intron (NM_001163703, intron 1 of 2)	24756	NM_173408	233805	Mm.31539	NM_173408	ENSMUSG00000048787	Dcun1d3	1700020A13Rik|BC030335	DCN1, defective in cullin neddylation 1, domain containing 3 (S. cerevisiae)	protein-coding
common_peak1-11802-20-14-0.581184188982674-0.690311289528838	chr16	57420925	57421786	+	0	NA	intron (NM_001040397, intron 1 of 4)	intron (NM_001040397, intron 1 of 4)	67965	NM_001040397	78749	Mm.328360	NM_001040397	ENSMUSG00000043336	Filip1l	4631422O05Rik|Doc1	filamin A interacting protein 1-like	protein-coding
common_peak1-11937-112-82-1.05821086897336-7.51064461606705	chr17	3081192	3082739	+	0	NA	intron (NR_003519, intron 1 of 7)	intron (NR_003519, intron 1 of 7)	2218	NR_003519	328734	Mm.335641	NR_003519		Pisd-ps2	D030013I16Rik	phosphatidylserine decarboxylase, pseudogene 2	pseudo
unique_peak2-36513-3-5--0.998945590680433-0.96108193396963	chr2	158029131	158029535	+	0	NA	intron (NM_001131021, intron 10 of 15)	B1_Mus2|SINE|Alu	11589	NR_036606	73399	Mm.416861	NR_036606	ENSMUSG00000078957	1700060C20Rik	-	RIKEN cDNA 1700060C20 gene	ncRNA
common_peak2-30745-12-22--0.874785970969374-0.809260849721102	chr7	118740227	118741061	+	0	NA	intron (NM_173739, intron 3 of 10)	intron (NM_173739, intron 3 of 10)	182847	NM_173739	233733	Mm.323322	NM_173739	ENSMUSG00000038296	Galnt18	2900011G21Rik|BC024988|Galntl4	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 18	protein-coding
common_peak2-31629-16-33--0.969199198982277-1.43262124146305	chr8	123341074	123342184	+	0	NA	Intergenic	Intergenic	81353	NM_008320	15900	Mm.334861	NM_008320	ENSMUSG00000041515	Irf8	AI893568|ICSBP|IRF-8|Icsbp1|Myls	interferon regulatory factor 8	protein-coding
common_peak2-19639-12-7-0.648775985087639-0.697979855752659	chr1	40278793	40279228	+	0	NA	Intergenic	Intergenic	-2915	NM_008362	16177	Mm.896	NM_008362	ENSMUSG00000026072	Il1r1	CD121a|CD121b|IL-iR|Il1r-1	interleukin 1 receptor, type I	protein-coding
unique_peak1-4622-8-2-1.42025991722641-1.65811743852845	chr3	75930488	75931056	+	0	NA	intron (NM_001253719, intron 1 of 15)	L1Md_T|LINE|L1	51267	NM_001253719	213262	Mm.379337	NM_178673	ENSMUSG00000034098	Fstl5	9130207J01Rik	follistatin-like 5	protein-coding
common_peak1-15054-26-16-0.840436250908123-1.24110690293937	chr3	122887604	122888747	+	0	NA	intron (NM_080451, intron 1 of 4)	RCHARR1|DNA|MER1_type	50892	NM_080451	118449	Mm.34359	NM_080451	ENSMUSG00000050315	Synpo2	1110069I04Rik|2310068J10Rik|9530006G20Rik|AI848603|Myo	synaptopodin 2	protein-coding
common_peak1-8992-8-10--0.454209200689727-1.078512453669	chr11	59663615	59664131	+	0	NA	intron (NM_134029, intron 1 of 4)	intron (NM_134029, intron 1 of 4)	2298	NM_134029	103850	Mm.41761	NM_134029	ENSMUSG00000032615	Nt5m	2010013E09Rik|AI846937|dNT-2	5',3'-nucleotidase, mitochondrial	protein-coding
common_peak2-22043-43-66--0.283526004934069-0.518477330661964	chr12	69372081	69373485	+	0	NA	Intergenic	Lx5|LINE|L1	-602525	NR_033146	100316870	Mm.379794	NR_033146		Gm17821	-	DDB1 and CUL4 associated factor 5 pseudogene	pseudo
unique_peak1-1547-11-7-0.508693584251613-1.21681515183528	chr13	23430567	23431015	+	0	NA	Intergenic	L1MB1|LINE|L1	30286	NM_001286156	218100	Mm.286454	NM_172586	ENSMUSG00000046351	Zfp322a	Znf322|Znf322a	zinc finger protein 322A	protein-coding
common_peak1-9434-12-13--0.158578936969966-0.301029995663979	chr11	102155817	102156448	+	0	NA	intron (NM_001098837, intron 2 of 12)	intron (NM_001098837, intron 2 of 12)	1811	NM_001098836	217218	Mm.390381	NM_001098836	ENSMUSG00000059995	Atxn7l3	E030022H21Rik	ataxin 7-like 3	protein-coding
common_peak2-27574-31-70--0.924508448691559-2.54750191086934	chr3	98381791	98383223	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-14546	NM_008294	15495	Mm.14309	NM_008294	ENSMUSG00000095143	Hsd3b4	-	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 4	protein-coding
common_peak1-8911-19-15-0.402687326661686-0.519193887192487	chr11	50827258	50828063	+	0	NA	Intergenic	Intergenic	7184	NM_146909	18351	Mm.246541	NM_146909	ENSMUSG00000060918	Olfr51	ID7|MOR129-3	olfactory receptor 51	protein-coding
unique_peak2-38137-7-7--0.200909169701811-0.97990265578305	chr6	84317650	84318090	+	0	NA	Intergenic	B4A|SINE|B4	55962	NR_046063	100038556	Mm.387783	NR_046063		Gm10445	ENSMUSG00000072956	predicted gene 10445	ncRNA
common_peak2-27857-77-87-0.3250949609187-0.885462932858989	chr3	152568131	152570050	+	0	NA	intron (NM_012028, intron 2 of 4)	intron (NM_012028, intron 2 of 4)	76081	NM_012028	26938	Mm.40915	NM_012028		St6galnac5	AI851940|Siat7e	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	protein-coding
common_peak2-30424-11-17--0.661231417190699-0.58239619684445	chr7	42692351	42693138	+	0	NA	Intergenic	Intergenic	-3379532	NM_001013810	434171	Mm.60990	NM_001013810	ENSMUSG00000060565	Gm5591	EG434171	predicted gene 5591	protein-coding
common_peak2-31087-13-25--0.921967687503323-0.983972868822056	chr8	25101828	25102628	+	0	NA	intron (NM_177086, intron 5 of 6)	intron (NM_177086, intron 5 of 6)	322095	NM_177086	320158	Mm.121274	NM_177086	ENSMUSG00000037492	Zmat4	9630048M01Rik	zinc finger, matrin type 4	protein-coding
common_peak2-25905-19-38--0.882714892200562-1.37991291380345	chr19	46003345	46004348	+	0	NA	intron (NM_198296, intron 19 of 25)	intron (NM_198296, intron 19 of 25)	69132	NM_198296	71617	Mm.210949	NM_198296	ENSMUSG00000039901	9130011E15Rik	AI431055|AW050122	RIKEN cDNA 9130011E15 gene	protein-coding
unique_peak2-35725-2-6--1.72480917832092-1.26211192963361	chr18	35045012	35045294	+	0	NA	Intergenic	Intergenic	24292	NM_007913	13653	Mm.181959	NM_007913		Egr1	A530045N19Rik|ETR103|Egr-1|Krox-1|Krox-24|Krox24|NGF1-A|NGFI-A|NGFIA|TIS8|Zenk|Zfp-6|Zif268|egr	early growth response 1	protein-coding
common_peak2-31564-8-7-0.00522241794757061-1.00793137938329	chr8	117280733	117281134	+	0	NA	intron (NM_019573, intron 8 of 8)	intron (NM_019573, intron 8 of 8)	317381	NM_019573	80707	Mm.440420	NM_019573	ENSMUSG00000004637	Wwox	5330426P09Rik|9030416C10Rik|WOX1	WW domain-containing oxidoreductase	protein-coding
common_peak2-26775-49-59-0.0993932274166651-0.345177777143024	chr2	144164843	144166271	+	0	NA	Intergenic	Intergenic	-7741	NM_026924	107586	Mm.252750	NM_026924	ENSMUSG00000037279	Ovol2	1700108N11Rik|1810007D21Rik|M-OVO|M-OVO-A|M-OVO-B|MOVO|Ovo2|Zfp339|movo2	ovo-like 2 (Drosophila)	protein-coding
common_peak2-23900-16-15-0.118263642268062-0.328191099940264	chr16	4472902	4473628	+	0	NA	Intergenic	Intergenic	49788	NM_175347	106393	Mm.35811	NM_175347	ENSMUSG00000022519	Srl	9830004M20Rik|AW108387|sar	sarcalumenin	protein-coding
common_peak1-10359-22-32--0.397110014271049-0.488172498216822	chr13	90088886	90089832	+	0	NA	intron (NM_028012, intron 6 of 7)	intron (NM_028012, intron 6 of 7)	139854	NM_028012	108138	Mm.37531	NM_028012	ENSMUSG00000021615	Xrcc4	2310057B22Rik|AW413319|AW545101	X-ray repair complementing defective repair in Chinese hamster cells 4	protein-coding
common_peak2-24467-15-6-1.20480982849805-1.32521814697968	chr17	24209030	24209441	+	0	NA	intron (NM_027008, intron 1 of 5)	intron (NM_027008, intron 1 of 5)	1217	NM_027008	69259	Mm.28171	NM_027008	ENSMUSG00000016946	Kctd5	2610030N08Rik|mKIAA0176	potassium channel tetramerisation domain containing 5	protein-coding
common_peak2-26702-56-42-0.809331070737145-2.34985861513818	chr2	127587110	127587735	+	0	NA	intron (NM_001291012, intron 11 of 19)	intron (NM_001291012, intron 11 of 19)	27205	NM_016902	53885	Mm.210766	NM_016902	ENSMUSG00000027378	Nphp1	-	nephronophthisis 1 (juvenile) homolog (human)	protein-coding
common_peak1-9437-29-36--0.0971632850138393-0.304088508634286	chr11	102295698	102296872	+	0	NA	intron (NM_008175, intron 8 of 12)	intron (NM_008175, intron 8 of 12)	4649	NM_008175	14824	Mm.1568	NM_008175	ENSMUSG00000034708	Grn	Pgrn|epithelin	granulin	protein-coding
common_peak2-29664-18-20--0.0793982715504091-0.301029995663976	chr6	71990210	71991131	+	0	NA	intron (NR_046180, intron 1 of 2)	intron (NR_046180, intron 1 of 2)	1852	NR_046180	330350	Mm.246787	NR_046180		9130221F21Rik	9130221F21	RIKEN cDNA 9130221F21 gene	ncRNA
unique_peak1-1570-9-1-2.18961340640422-2.31132995230379	chr13	31310229	31310739	+	0	NA	intron (NR_045957, intron 2 of 2)	intron (NR_045957, intron 2 of 2)	22471	NR_045957	73924	Mm.417825	NR_045957	ENSMUSG00000087460	4930401O12Rik	-	RIKEN cDNA 4930401O12 gene	ncRNA
common_peak2-22449-18-15-0.312919151228352-0.456667090758524	chr13	41662427	41663176	+	0	NA	Intergenic	B1F|SINE|Alu	-38784	NM_001163572	621976	Mm.259830	NM_001163572	ENSMUSG00000087370	Tmem170b	EG621976	transmembrane protein 170B	protein-coding
common_peak2-29166-24-19-0.471281807880354-0.677583764578261	chr5	131814596	131815287	+	0	NA	Intergenic	RSINE1|SINE|B4	-31549	NM_145218	212996	Mm.299204	NM_145218		Wbscr17	AA388321|E330012B09Rik	Williams-Beuren syndrome chromosome region 17 homolog (human)	protein-coding
common_peak2-20682-10-8-0.186490343566457-1.078512453669	chr10	88503457	88504042	+	0	NA	intron (NM_001277188, intron 8 of 27)	intron (NM_001277188, intron 8 of 27)	155012	NM_145423	216225	Mm.77381	NM_145423	ENSMUSG00000020062	Slc5a8	Ait|SMCT	solute carrier family 5 (iodide transporter), member 8	protein-coding
unique_peak1-4639-19-6-1.59533240460408-2.21753093801298	chr3	87761561	87762402	+	0	NA	Intergenic	Intergenic	9366	NM_007759	12904	Mm.4757	NM_007759	ENSMUSG00000004885	Crabp2	AI893628|Crabp-2|CrabpII	cellular retinoic acid binding protein II	protein-coding
common_peak1-9026-39-40-0.25820924230107-0.498996592876743	chr11	61761489	61762294	+	0	NA	Intergenic	Intergenic	-8374	NM_001281818	432572	Mm.458025	NM_001029936	ENSMUSG00000042331	Specc1	2810012G08Rik|B230396K10Rik|Cytsb	sperm antigen with calponin homology and coiled-coil domains 1	protein-coding
common_peak2-29030-15-17--0.157760250886656-0.307611222530528	chr5	113992805	113993768	+	0	NA	intron (NM_177292, intron 1 of 8)	intron (NM_177292, intron 1 of 8)	73819	NM_177292	320916	Mm.102783	NM_177292	ENSMUSG00000063430	Wscd2	4933413A10Rik|C530024P05Rik|Gm450	WSC domain containing 2	protein-coding
common_peak1-8352-23-75--1.5261600089345-5.68750260729795	chr10	57531800	57532713	+	0	NA	TTS (NM_020561)	TTS (NM_020561)	17906	NM_020561	57319	Mm.2379	NM_020561	ENSMUSG00000019872	Smpdl3a	0610010C24Rik|AI529588|ASM3A|ASML3|ASML3A	sphingomyelin phosphodiesterase, acid-like 3A	protein-coding
common_peak2-26003-22-13-0.8399291830298-1.1381569562463	chr19	55700271	55701069	+	0	NA	3' UTR (NM_001293685, exon 9 of 9)	3' UTR (NM_001293685, exon 9 of 9)	76024	NR_045318	77594	Mm.329924	NR_045318	ENSMUSG00000097632	4930552P12Rik	-	RIKEN cDNA 4930552P12 gene	ncRNA
unique_peak2-37286-3-4--0.73591118484664-0.864171920961574	chr4	118179745	118180109	+	0	NA	Intergenic	ORR1A1|LTR|MaLR	-17473	NM_011587	21846	Mm.4345	NM_011587	ENSMUSG00000033191	Tie1	D430008P04Rik|TIE|tie-1	tyrosine kinase with immunoglobulin-like and EGF-like domains 1	protein-coding
common_peak1-15023-29-29-0.205399485006592-0.423354874519384	chr3	117073959	117075373	+	0	NA	Intergenic	Intergenic	-10872	NM_177664	229791	Mm.140138	NM_177664	ENSMUSG00000044667	Lppr4	A330086D10|D3Bwg0562e|PRG-1|mKIAA0455	lipid phosphate phosphatase-related protein type 4	protein-coding
common_peak2-21453-51-24-1.43106763582785-4.89407448190067	chr11	86859274	86860369	+	0	NA	intron (NM_025638, intron 4 of 9)	intron (NM_025638, intron 4 of 9)	27818	NM_025638	66569	Mm.281887	NM_025638	ENSMUSG00000061666	Gdpd1	2610020H15Rik	glycerophosphodiester phosphodiesterase domain containing 1	protein-coding
unique_peak1-6268-7-4-0.477162735410827-1.09384600808989	chr7	24953837	24954132	+	0	NA	Intergenic	L1Md_Gf|LINE|L1	-6080	NM_001029933	232966	Mm.435485	NM_001029933		Zfp114	Gm1957|Zfp110	zinc finger protein 114	protein-coding
common_peak1-18325-33-109--1.45002215099913-7.51163328481481	chr8	57511677	57512679	+	0	NA	Intergenic	Intergenic	873583	NM_175939	244486	Mm.67684	NM_175939	ENSMUSG00000046258	Adam29	-	a disintegrin and metallopeptidase domain 29	protein-coding
common_peak2-27503-11-23--1.07626891646954-1.24082643394777	chr3	95054476	95055259	+	0	NA	intron (NM_134253, intron 1 of 9)	intron (NM_134253, intron 1 of 9)	248	NM_001168356	171388	Mm.331209	NM_134253	ENSMUSG00000028115	Bnipl	1700128A13Rik|BNIP-S|BNIPL1|BNIPL2|PP73|PP753	BCL2/adenovirus E1B 19kD interacting protein like	protein-coding
common_peak2-27818-6-11--1.01956439034085-1.32595962126035	chr3	145614342	145614736	+	0	NA	Intergenic	ORR1E|LTR|MaLR	13543	NM_025555	66421	Mm.25137	NM_025555		2410004B18Rik	4930572C24Rik	RIKEN cDNA 2410004B18 gene	protein-coding
unique_peak1-5080-11-3-1.50869358425161-1.95434855131066	chr4	141874209	141874792	+	0	NA	Intergenic	Intergenic	-79184	NM_001109685	71529	Mm.255986	NM_144531	ENSMUSG00000040606	Kazn	2310007B04Rik|9030409G11Rik|AI256607|AI666764|AW061099|Kaz|Kazrin	kazrin, periplakin interacting protein	protein-coding
common_peak2-26289-12-14--0.25811461052088-0.309074325783021	chr2	31152298	31152881	+	0	NA	Intergenic	B4A|SINE|B4	51146	NM_019681	14299	Mm.249318	NM_019681	ENSMUSG00000062661	Ncs1	9430075O15Rik|A730032G13Rik|AI836659|Freq|Mfreq|NCS-1	neuronal calcium sensor 1	protein-coding
common_peak1-17632-46-43-0.438564324611504-0.913104017362127	chr7	47041486	47043460	+	0	NA	Intergenic	Intergenic	269337	NM_001004139	70227	Mm.333800	NM_001004139	ENSMUSG00000068959	Zfp619	3000002G13Rik	zinc finger protein 619	protein-coding
common_peak1-15000-19-18-0.154759813218101-0.351190433797598	chr3	108571680	108572467	+	0	NA	intron (NM_177859, intron 6 of 11)	ID4|SINE|ID	29497	NM_177859	329738	Mm.72322	NM_177859	ENSMUSG00000049565	Aknad1	4921525H12Rik	AKNA domain containing 1	protein-coding
common_peak1-10532-43-31-0.782563185523703-1.77490324686543	chr14	14120077	14121297	+	0	NA	intron (NM_028052, intron 2 of 5)	L1ME4a|LINE|L1	3393	NM_028052	72003	Mm.317515	NM_028052	ENSMUSG00000056296	Synpr	1500003F20Rik|SPO	synaptoporin	protein-coding
common_peak1-17697-32-26-0.524204517056192-0.869438253311882	chr7	73541058	73542074	+	0	NA	intron (NM_053080, intron 12 of 12)	intron (NM_053080, intron 12 of 12)	-8339	NM_146191	233328	Mm.33284	NM_146191	ENSMUSG00000015133	Lrrk1	AW319595|C230002E15Rik|D130026O16Rik|mKIAA1790	leucine-rich repeat kinase 1	protein-coding
unique_peak1-1939-7-1-1.79909083029819-1.80617997398389	chr14	78538795	78539233	+	0	NA	Intergenic	RMER16-int|LTR|ERVK	-50200	NM_177629	219170	Mm.320428	NM_177629	ENSMUSG00000045655	Fam216b	9330158N17|AU021034	family with sequence similarity 216, member B	protein-coding
unique_peak1-7195-16-3-2.11826364226806-2.65002542325363	chr9	64084479	64085124	+	0	NA	TTS (NM_033607)	TTS (NM_033607)	1793	NM_033607	93841	Mm.390180	NM_033607	ENSMUSG00000035337	Uchl4	-	ubiquitin carboxyl-terminal esterase L4	protein-coding
common_peak2-28176-46-50-0.225570601277306-0.498709391116689	chr4	109475650	109476890	+	0	NA	intron (NM_007983, intron 8 of 18)	MTD|LTR|MaLR	127038	NM_007983	14084	Mm.318259	NM_007983	ENSMUSG00000010517	Faf1	AA408698|Dffrx|Fam	Fas-associated factor 1	protein-coding
unique_peak1-5143-8-1-2.00522241794757-2.05605744720049	chr5	13988517	13989027	+	0	NA	Intergenic	Intergenic	-36504	NM_011348	20349	Mm.134093	NM_011348	ENSMUSG00000063531	Sema3e	6430702L12|AA408817|Semah|mKIAA0331	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E	protein-coding
common_peak2-26411-12-14--0.25811461052088-0.309074325783021	chr2	59628058	59628692	+	0	NA	intron (NM_001290659, intron 7 of 25)	intron (NM_001290659, intron 7 of 25)	92288	NM_001159636	72137	Mm.288734	NM_028118	ENSMUSG00000026988	Wdsub1	1700048E19Rik|2610014F08Rik	WD repeat, SAM and U-box domain containing 1	protein-coding
common_peak1-12692-82-93-0.338674292628097-0.99518918075986	chr18	39490878	39492372	+	0	NA	intron (NM_175164, intron 20 of 22)	intron (NM_175164, intron 20 of 22)	155274	NM_008173	14815	Mm.129481	NM_008173	ENSMUSG00000024431	Nr3c1	GR|Grl-1|Grl1	nuclear receptor subfamily 3, group C, member 1	protein-coding
common_peak2-24156-36-61--0.474875224219121-0.827470873527606	chr16	42875749	42876664	+	0	NA	promoter-TSS (NR_040522)	promoter-TSS (NR_040522)	-331	NR_040522	75722	Mm.243747	NR_040521	ENSMUSG00000075070	4932412D23Rik	ENSMUSG00000075070|Gm10809	RIKEN cDNA 4932412D23 gene	ncRNA
common_peak2-30743-12-24--0.995080204687086-1.0220094258199	chr7	118532914	118533624	+	0	NA	Intergenic	Lx4A|LINE|L1	-267080	NR_015573	75479	Mm.381620	NR_015573		1700012D14Rik	-	RIKEN cDNA 1700012D14 gene	ncRNA
common_peak2-21205-25-34--0.26743311159986-0.387290225425543	chr11	61266714	61267942	+	0	NA	exon (NM_001291024, exon 1 of 14)	exon (NM_001291024, exon 1 of 14)	166	NM_009548	22671	Mm.89201	NM_009548	ENSMUSG00000010086	Rnf112	ZNF179|Zfp179|bfp	ring finger protein 112	protein-coding
unique_peak2-36649-3-6--1.22133801201688-1.08602067057793	chr3	10368201	10368577	+	0	NA	intron (NM_025519, intron 1 of 4)	intron (NM_025519, intron 1 of 4)	1416	NM_025519	66371	Mm.366147	NM_025519	ENSMUSG00000027536	Chmp4c	2010012P02Rik|2210015K02Rik|2310010I16Rik|Shax3|Snf7-3	charged multivesicular body protein 4C	protein-coding
unique_peak1-5157-12-4-1.32684789020028-2.04196296489515	chr5	24752294	24752946	+	0	NA	intron (NM_144908, intron 1 of 11)	intron (NM_144908, intron 1 of 11)	23909	NM_144908	231050	Mm.246718	NM_144908	ENSMUSG00000038072	Galnt11	A430075I06Rik|AI648252|E430002F06Rik	UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11	protein-coding
common_peak1-17751-69-106--0.146324539142414-0.387703360961311	chr7	83883459	83885517	+	0	NA	intron (NM_001199224, intron 20 of 22)	L1Md_F2|LINE|L1	509715	NM_001199224	244071	Mm.322829	NM_172902	ENSMUSG00000025754	Agbl1	Ccp4|D430020F16|EG244071|Nna1-l1	ATP/GTP binding protein-like 1	protein-coding
common_peak1-14305-41-54--0.0802110086759997-0.30922471743021	chr2	160730958	160732131	+	0	NA	TTS (NM_001291145)	TTS (NM_001291145)	6531	NM_001291145	280635	Mm.330747	NM_182840	ENSMUSG00000050700	Emilin3	1110013O17Rik|EMILIN-3|EMILIN-5|EMILIN-T|Emilin5	elastin microfibril interfacer 3	protein-coding
unique_peak2-33691-6-12--1.13504160776079-1.45089835786865	chr11	105126423	105127090	+	0	NA	intron (NM_001294329, intron 14 of 19)	intron (NM_001294329, intron 14 of 19)	-27204	NM_008626	17534	Mm.235616	NM_008626	ENSMUSG00000020695	Mrc2	Endo180|mKIAA0709|uPARAP	mannose receptor, C type 2	protein-coding
common_peak1-17074-60-22-1.83072990556352-8.30271713119819	chr6	108531234	108533532	+	0	NA	intron (NR_104577, intron 4 of 6)	MTD|LTR|MaLR	40778	NR_040757	75394	Mm.395061	NR_040757	ENSMUSG00000087341	0610040F04Rik	-	RIKEN cDNA 0610040F04 gene	ncRNA
common_peak1-19457-5-19--2.02630843089322-2.19184853030482	chrX	103749737	103750001	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-28656	NM_001033541	331493	Mm.249319	NM_001033541	ENSMUSG00000073010	Gm5127	B130007I08|EG331493	predicted gene 5127	protein-coding
unique_peak2-35197-1-22--4.15061896627376-5.43827864561946	chr16	62846304	62847074	+	0	NA	5' UTR (NM_026577, exon 1 of 10)	5' UTR (NM_026577, exon 1 of 10)	177	NM_026577	68146	Mm.96833	NM_026577	ENSMUSG00000022911	Arl13b	A530097K21Rik|A930014M17Rik|Arl2l1|C530009C10Rik|hnn	ADP-ribosylation factor-like 13B	protein-coding
common_peak1-15135-28-27-0.245604197763859-0.431536360747188	chr3	142764950	142766130	+	0	NA	Intergenic	Intergenic	-140479	NR_040551	320072	Mm.136397	NR_040551		A830019L24Rik	-	RIKEN cDNA A830019L24 gene	ncRNA
unique_peak2-33401-10-18--0.891512168434816-0.804350088532826	chr11	53769589	53770391	+	0	NA	intron (NM_019723, intron 5 of 9)	intron (NM_019723, intron 5 of 9)	23539	NM_019723	56517	Mm.154284	NM_019723	ENSMUSG00000063652	Slc22a21	Octn3|Slc22a9	solute carrier family 22 (organic cation transporter), member 21	protein-coding
common_peak1-12679-34-29-0.475177931392747-0.820829064533854	chr18	38080921	38081975	+	0	NA	intron (NM_007858, intron 1 of 26)	intron (NM_007858, intron 1 of 26)	13617	NM_007858	13367	Mm.195916	NM_007858	ENSMUSG00000024456	Diap1	D18Wsu154e|Dia1|Diaph1|Drf1|mKIAA4062|p140mDia	diaphanous homolog 1 (Drosophila)	protein-coding
common_peak1-17984-9-9--0.132314688483142-1.03275496310833	chr7	135605049	135605526	+	0	NA	promoter-TSS (NM_009383)	promoter-TSS (NM_009383)	-260	NM_009383	21843	Mm.242072	NM_009383	ENSMUSG00000030846	Tial1	5330433G13Rik|AL033329|TIAR|mTIAR	Tia1 cytotoxic granule-associated RNA binding protein-like 1	protein-coding
common_peak1-19348-20-28--0.369906210536379-0.457753417732779	chrX	8145047	8145943	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-20114	NM_001205108	668976	Mm.227643	NM_001205108	ENSMUSG00000079702	Ssxb6	-	synovial sarcoma, X member B, breakpoint 6	protein-coding
common_peak2-30168-104-78-1.00096445303505-6.30807502007455	chr6	148944475	148945958	+	0	NA	intron (NM_177192, intron 20 of 20)	intron (NM_177192, intron 20 of 20)	-50262	NM_019643	56306	Mm.18637	NM_019643	ENSMUSG00000039985	Fam60a	Ppcs1|Pptcs1|Tera	family with sequence similarity 60, member A	protein-coding
common_peak1-8043-12-16--0.4386868561627-0.368541233333383	chr1	171345651	171346406	+	0	NA	Intergenic	Intergenic	115567	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
common_peak2-20410-23-37--0.526160008934505-0.720235944639228	chr10	25271987	25273106	+	0	NA	Intergenic	Intergenic	-16468	NM_001195596	100504474	Mm.46323	NM_001195596	ENSMUSG00000096546	Smlr1	2010003K15Rik	small leucine-rich protein 1	protein-coding
common_peak2-26502-45-29-0.953467429736353-2.44083020633064	chr2	84743100	84743877	+	0	NA	Intergenic	RLTR6-int|LTR|ERV1	-16639	NM_199223	269295	Mm.86447	NM_199223	ENSMUSG00000050896	Rtn4rl2	Ngr2|Ngrh1|Ngrl3	reticulon 4 receptor-like 2	protein-coding
unique_peak2-34069-2-6--1.72480917832092-1.26211192963361	chr13	113622720	113623172	+	0	NA	intron (NM_008903, intron 1 of 5)	intron (NM_008903, intron 1 of 5)	31961	NM_008247	19012	Mm.317186	NM_008247	ENSMUSG00000021759	Ppap2a	Hic53|Hpic53|LPP-1|LPP1|PAP-2a|PAP2-alpha|PAP2a|mPAP	phosphatidic acid phosphatase type 2A	protein-coding
common_peak1-7769-20-40--0.869477220026891-1.45230360914611	chr1	92933668	92934650	+	0	NA	intron (NM_001111312, intron 1 of 12)	intron (NM_001111312, intron 1 of 12)	-15862	NM_001111311	16978	Mm.45039	NM_008515	ENSMUSG00000026305	Lrrfip1	AU024550|Fliiap1	leucine rich repeat (in FLII) interacting protein 1	protein-coding
unique_peak1-1390-10-2-1.77145284428761-2.09384600808989	chr12	59013351	59013861	+	0	NA	Intergenic	L1Md_A|LINE|L1	-299185	NM_009216	20605	Mm.278336	NM_009216		Sstr1	SRIF-2|SS-1-R|SS1-R|SS1R|Smstr-1|Smstr1|sst1	somatostatin receptor 1	protein-coding
common_peak1-7464-14-16--0.188246680892695-0.308035960714963	chr1	141066223	141067051	+	0	NA	exon (NM_181347, exon 21 of 21)	exon (NM_181347, exon 21 of 21)	192403	NR_108103	78229	Mm.437838	NR_108103		4930596I21Rik	-	RIKEN cDNA 4930596I21 gene	ncRNA
common_peak1-16865-9-8-0.0196884049619079-1.03275496310833	chr6	56923455	56923999	+	0	NA	Intergenic	Intergenic	-11609	NM_134174	171192	Mm.377172	NM_134174	ENSMUSG00000090346	Vmn1r5	V1rc19	vomeronasal 1 receptor 5	protein-coding
common_peak2-22162-18-13-0.505564229170747-0.625923329873571	chr12	87443171	87444016	+	0	NA	intron (NM_029601, intron 2 of 7)	intron (NM_029601, intron 2 of 7)	20082	NM_001199843	76411	Mm.292345	NM_029601	ENSMUSG00000007867	Ift43	1700019E19Rik|R75064	intraflagellar transport 43	protein-coding
common_peak2-31976-3-5--0.998945590680433-0.96108193396963	chr9	69441854	69442206	+	0	NA	Intergenic	L1Md_F2|LINE|L1	137279	NR_037296	100526560		NR_037296	miRBase:MI0014106	Mir3109	mmu-mir-3109	microRNA 3109	ncRNA
common_peak2-20548-4-5--0.608423014574403-0.909929411522249	chr10	68280037	68280342	+	0	NA	Intergenic	Intergenic	93695	NM_177794	327766	Mm.2479	NM_177794	ENSMUSG00000060044	Tmem26	3230401A06|AI195372	transmembrane protein 26	protein-coding
common_peak2-28500-20-32--0.55631933476726-0.705485015404196	chr5	144965309	144966111	+	0	NA	intron (NM_027410, intron 14 of 24)	intron (NM_027410, intron 14 of 24)	14555	NM_010800	17341	Mm.386767	NM_010800	ENSMUSG00000052271	Bhlha15	1810009C13Rik|Bhlhb8|MIST-1|Mist1	basic helix-loop-helix family, member a15	protein-coding
common_peak1-10703-30-16-1.08221256824153-2.01522565129858	chr14	57760050	57761436	+	0	NA	Intergenic	Intergenic	-8295	NM_001010937	14623	Mm.25652	NM_008128	ENSMUSG00000040055	Gjb6	AA958971|Cx30|D14Bwg0506e	gap junction protein, beta 6	protein-coding
unique_peak1-6576-7-7--0.200909169701811-0.97990265578305	chr7	140221100	140221566	+	0	NA	intron (NM_009980, intron 2 of 10)	intron (NM_009980, intron 2 of 10)	-14403	NM_001170744	13017	Mm.246240	NM_009980	ENSMUSG00000030970	Ctbp2	AA407280|D7Ertd45e|Gtrgeo6|Ribeye	C-terminal binding protein 2	protein-coding
common_peak1-8174-32-62--0.698187904280257-1.44840522860438	chr10	123075709	123076674	+	0	NA	intron (NR_045514, intron 2 of 5)	intron (NR_045514, intron 2 of 5)	375059	NM_001252387	268354	Mm.51939	NM_182807	ENSMUSG00000044071	Fam19a2	6330575M02|FAM19A2 TAFA-2|TAFA2|Tafa-2	family with sequence similarity 19, member A2	protein-coding
common_peak2-30296-12-13--0.158578936969966-0.301029995663979	chr7	19309839	19310395	+	0	NA	intron (NM_001004152, intron 4 of 4)	intron (NM_001004152, intron 4 of 4)	6678	NM_001004152	243862	Mm.389833	NM_001004152	ENSMUSG00000044903	Psg22	AA408604|cea9	pregnancy-specific glycoprotein 22	protein-coding
common_peak2-22390-8-5-0.420259917226415-1.10484139239135	chr13	32904539	32904907	+	0	NA	intron (NM_030215, intron 3 of 6)	intron (NM_030215, intron 3 of 6)	10824	NM_030215	78903	Mm.286680	NM_030215	ENSMUSG00000021400	Wrnip1	4833444L21Rik|WHIP|Wrnip	Werner helicase interacting protein 1	protein-coding
unique_peak1-1047-17-8-1.04837133676273-1.30305656033811	chr11	78550350	78551404	+	0	NA	Intergenic	Intergenic	14354	NM_197989	69109	Mm.341420	NM_197989	ENSMUSG00000049489	Fam58b	1810009O10Rik|Fam58a	family with sequence similarity 58, member B	protein-coding
unique_peak2-36660-5-8--0.874305337448166-1.10484139239135	chr3	21962264	21962631	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-13127	NM_030732	81004	Mm.202966	NM_030732	ENSMUSG00000027630	Tbl1xr1	8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1	transducin (beta)-like 1X-linked receptor 1	protein-coding
common_peak1-8930-35-32-0.386976139104051-0.652627812244279	chr11	52333022	52334076	+	0	NA	Intergenic	MLT1L|LTR|MaLR	123619	NM_153117	213673	Mm.291979	NM_153117	ENSMUSG00000036275	9530068E07Rik	C85061|Kct2	RIKEN cDNA 9530068E07 gene	protein-coding
common_peak2-27493-48-118--0.923890612073129-3.9881686372206	chr3	94837352	94838460	+	0	NA	exon (NM_001282017, exon 7 of 10)	exon (NM_001282017, exon 7 of 10)	8630	NM_001282017	19185	Mm.2261	NM_008951	ENSMUSG00000005625	Psmd4	Af1|Mcb1|angiocidin	proteasome (prosome, macropain) 26S subunit, non-ATPase, 4	protein-coding
unique_peak2-38972-10-21--1.10301627362853-1.16735254179725	chr8	35433861	35434669	+	0	NA	Intergenic	Intergenic	-204499	NR_105820	102465211		NR_105820	miRBase:MI0021930	Mir6395	mmu-mir-6395	microRNA mir-6395	ncRNA
common_peak1-12201-45-28-1.0023770302173-2.62199132005206	chr17	33092067	33093761	+	0	NA	intron (NR_033585, intron 2 of 2)	intron (NR_033585, intron 2 of 2)	-8608	NM_130882	170716	Mm.254838	NM_130882	ENSMUSG00000024055	Cyp4f13	0610030I10Rik|Cypf13	cytochrome P450, family 4, subfamily f, polypeptide 13	protein-coding
common_peak1-12633-9-14--0.717277189204299-0.53895475198017	chr18	34651016	34651525	+	0	NA	intron (NM_146084, intron 6 of 20)	B3|SINE|B2	15207	NM_146084	225358	Mm.226899	NM_146084	ENSMUSG00000036501	Fam13b	2610024E20Rik|AW060714|AW546153	family with sequence similarity 13, member B	protein-coding
common_peak1-18003-10-29--1.55047525059975-2.39922209159552	chr7	140036176	140036677	+	0	NA	intron (NM_028095, intron 3 of 5)	B3|SINE|B2	7904	NM_028095	72096	Mm.28631	NM_028095	ENSMUSG00000030960	Mettl10	2010208K18Rik	methyltransferase like 10	protein-coding
common_peak2-31805-30-20-0.777357986713112-1.30767018140166	chr9	37232259	37233505	+	0	NA	exon (NM_001164767, exon 8 of 28)	exon (NM_001164767, exon 8 of 28)	7878	NM_001164767	19649	Mm.212826	NM_011248	ENSMUSG00000032128	Robo3	Rbig1|Rig-1|Rig1|Robo3a|Robo3b	roundabout homolog 3 (Drosophila)	protein-coding
unique_peak1-4115-25-0-4.86184990534511-NA	chr2	84051955	84052669	+	0	NA	Intergenic	L1_Mm|LINE|L1	213111	NM_018782	54598	Mm.75467	NM_018782	ENSMUSG00000059588	Calcrl	AV071593|CRLR	calcitonin receptor-like	protein-coding
unique_peak2-36104-3-15--2.41398308995928-2.80787975886178	chr2	13270736	13271478	+	0	NA	intron (NM_001081084, intron 38 of 66)	RLTR11B|LTR|ERVK	-78065	NM_009105	20163	Mm.905	NM_009105	ENSMUSG00000026727	Rsu1	RsuI|rsp-1	Ras suppressor protein 1	protein-coding
common_peak1-17107-19-16-0.315224485411347-0.448200956659575	chr6	113656030	113656971	+	0	NA	promoter-TSS (NR_106009)	promoter-TSS (NR_106009)	-702	NR_106009	102465631		NR_106009		Mir7042	mmu-mir-7042	microRNA mir-7042	ncRNA
common_peak2-23334-25-41--0.530467517433655-0.749946955723563	chr15	38298849	38300205	+	0	NA	Intergenic	MLT1B|LTR|MaLR	-69061	NM_001289471	21847	Mm.4292	NM_013692	ENSMUSG00000037465	Klf10	AI115143|EGR[a]|Egral|Gdnfif|TIEG-1|Tieg|Tieg1|mGIF	Kruppel-like factor 10	protein-coding
unique_peak2-38308-1-5--2.2120195109379-1.32905871926422	chr6	140152609	140153030	+	0	NA	Intergenic	Intergenic	162773	NM_007605	12344	Mm.12817	NM_007605	ENSMUSG00000041791	Capza3	510-4|Cappa3|Gsg3|Tex8|repro32	capping protein (actin filament) muscle Z-line, alpha 3	protein-coding
common_peak2-25239-23-27--0.0855874175485232-0.30512735654709	chr18	64488321	64489308	+	0	NA	Intergenic	Intergenic	-11204	NM_194268	225631	Mm.234723	NM_194268	ENSMUSG00000045991	Onecut2	C730009D12|OC-2|Oc2	one cut domain, family member 2	protein-coding
common_peak2-29884-21-14-0.662598669657717-0.879255460030357	chr6	112948901	112949472	+	0	NA	Intergenic	Intergenic	-47135	NM_008188	14911	Mm.781	NM_008188	ENSMUSG00000030264	Thumpd3	AW556087|Gt(ROSA)26asSor|Gtrosa26as	THUMP domain containing 3	protein-coding
common_peak2-30264-21-15-0.569489265266236-0.756118839439552	chr7	16046451	16047109	+	0	NA	Intergenic	L1Md_A|LINE|L1	72580	NM_145708	246792	Mm.26391	NM_145708	ENSMUSG00000074369	Obox2	-	oocyte specific homeobox 2	protein-coding
common_peak2-20043-10-5-0.771452844287613-1.33892459842472	chr1	141463974	141464221	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	-7298	NM_015780	50702	Mm.220362	NM_015780	ENSMUSG00000057037	Cfhr1	AI194696|CFHRB|Cfhl1	complement factor H-related 1	protein-coding
common_peak2-20355-9-6-0.382258484346616-1.11707584880836	chr10	9602781	9603128	+	0	NA	intron (NM_001081344, intron 2 of 25)	intron (NM_001081344, intron 2 of 25)	17884	NM_001081344	78808	Mm.331751	NM_030191	ENSMUSG00000019790	Stxbp5	0710001E20Rik|4930565N16Rik|AW742610|LGL3|mKIAA1006	syntaxin binding protein 5 (tomosyn)	protein-coding
common_peak1-8080-27-26-0.236658448731768-0.436052471002789	chr1	179047516	179048860	+	0	NA	intron (NM_011785, intron 2 of 12)	intron (NM_011785, intron 2 of 12)	130710	NM_011785	23797	Mm.235194	NM_011785	ENSMUSG00000019699	Akt3	AI851531|D930002M15Rik|Nmf350	thymoma viral proto-oncogene 3	protein-coding
common_peak2-21946-15-29--0.894725845052863-1.1282783422172	chr12	31350766	31351606	+	0	NA	Intergenic	L1_Mus4|LINE|L1	81878	NM_172049	211986	Mm.34035	NM_172049	ENSMUSG00000043061	Tmem18	BC024093	transmembrane protein 18	protein-coding
common_peak2-28534-44-56--0.0109971795962061-0.30295167774669	chr5	138116230	138117545	+	0	NA	intron (NM_145566, intron 1 of 4)	B4|SINE|B4	8958	NM_178162	231801	Mm.260869	NM_145566	ENSMUSG00000029722	Agfg2	A630095P14Rik|Hrbl|RABR	ArfGAP with FG repeats 2	protein-coding
unique_peak2-34353-5-24--2.34823652578058-3.24127775360835	chr13	100744205	100744650	+	0	NA	intron (NM_030026, intron 7 of 16)	intron (NM_030026, intron 7 of 16)	41167	NM_030026	78038	Mm.137327	NM_030026	ENSMUSG00000021646	Mccc2	4930552N12Rik|MCCB	methylcrotonoyl-Coenzyme A carboxylase 2 (beta)	protein-coding
common_peak1-10147-19-27--0.404667595395917-0.464317215211849	chr13	34875305	34876183	+	0	NA	Intergenic	Intergenic	44233	NM_138746	108161	Mm.41991	NM_138746	ENSMUSG00000038246	Fam50b	D0H6S2654E|X5L|XAP-5-like	family with sequence similarity 50, member B	protein-coding
unique_peak1-7244-7-5-0.214128329577033-1.01466476204226	chr9	77911842	77912356	+	0	NA	intron (NM_008103, intron 5 of 5)	intron (NM_008103, intron 5 of 5)	12334	NM_008103	14531	Mm.1400	NM_008103	ENSMUSG00000023333	Gcm1	GCMa|Gcm-rs2|Gcm1-rs1|glide	glial cells missing homolog 1 (Drosophila)	protein-coding
unique_peak1-1807-12-4-1.32684789020028-2.04196296489515	chr14	25523644	25524191	+	0	NA	Intergenic	Intergenic	214014	NM_011297	20088	Mm.16775	NM_011297	ENSMUSG00000025290	Rps24	-	ribosomal protein S24	protein-coding
common_peak2-21658-28-31-0.0529591198214625-0.314603908022751	chr11	102644045	102644853	+	0	NA	Intergenic	Intergenic	21696	NM_001110778	11488	Mm.89854	NM_009613	ENSMUSG00000020926	Adam11	AW060611|Mdc	a disintegrin and metallopeptidase domain 11	protein-coding
common_peak1-16317-26-30--0.0262972182284127-0.301029995663988	chr5	115272033	115273089	+	0	NA	exon (NM_181075, exon 2 of 2)	exon (NM_181075, exon 2 of 2)	916	NM_181075	330173	Mm.482205	NM_181075	ENSMUSG00000092486	2610524H06Rik	-	RIKEN cDNA 2610524H06 gene	protein-coding
unique_peak1-5001-11-5-0.923731083530457-1.477227296591	chr4	119098450	119099009	+	0	NA	intron (NM_001014900, intron 1 of 7)	MER58B|DNA|MER1_type	3440	NM_001014900	332934	Mm.388911	NM_001014900	ENSMUSG00000070806	Zmynd12	AI414736	zinc finger, MYND domain containing 12	protein-coding
common_peak1-11921-22-15-0.647284105087405-0.849699271740893	chr17	46202710	46203681	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-33869	NM_001287057	22339	Mm.282184	NM_009505	ENSMUSG00000023951	Vegfa	Vegf|Vpf	vascular endothelial growth factor A	protein-coding
common_peak1-10675-24-14-0.886319307159198-1.33403699391683	chr14	52244364	52245340	+	0	NA	intron (NM_001013816, intron 1 of 4)	L1Md_F2|LINE|L1	72387	NM_001013816	434459	Mm.359230	NM_001013816	ENSMUSG00000079244	Gm5622	EG434459	predicted gene 5622	protein-coding
common_peak2-26516-25-32--0.182544214013348-0.333081040816759	chr2	90847039	90847927	+	0	NA	intron (NM_017368, intron 9 of 14)	B2_Mm1a|SINE|B2	-28301	NM_009023	19400	Mm.1272	NM_009023	ENSMUSG00000002104	Rapsn	43kDa|Nraps|Raps|rapsyn	receptor-associated protein of the synapse	protein-coding
common_peak1-10270-74-85-0.289621822276509-0.759030078841272	chr13	56134584	56136194	+	0	NA	Intergenic	Intergenic	101522	NM_012015	26914	Mm.283802	NM_012015	ENSMUSG00000015937	H2afy	H2AF12M|mH2a1|macroH2A1	H2A histone family, member Y	protein-coding
common_peak1-18062-57-95--0.318929460642227-0.710824722492017	chr8	11009024	11010184	+	0	NA	intron (NR_046017, intron 1 of 4)	CpG-13834	-1174	NM_001081212	384783	Mm.407207	NM_001081212	ENSMUSG00000038894	Irs2	Irs-2	insulin receptor substrate 2	protein-coding
common_peak1-16925-25-9-1.53992181045774-2.70611768348013	chr6	82871462	82872474	+	0	NA	intron (NM_011350, intron 5 of 13)	intron (NM_011350, intron 5 of 13)	17776	NM_011350	20355	Mm.270543	NM_011350	ENSMUSG00000000627	Sema4f	-	sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	protein-coding
unique_peak2-35933-5-8--0.874305337448166-1.10484139239135	chr19	7499187	7499610	+	0	NA	TTS (NM_001271487)	TTS (NM_001271487)	2335	NR_105957	102466781		NR_105957		Mir6991	mmu-mir-6991	microRNA mir-6991	ncRNA
common_peak2-22047-18-15-0.312919151228352-0.456667090758524	chr12	69474658	69475455	+	0	NA	Intergenic	L1M2|LINE|L1	-704798	NR_033146	100316870	Mm.379794	NR_033146		Gm17821	-	DDB1 and CUL4 associated factor 5 pseudogene	pseudo
common_peak2-25382-7-7--0.200909169701811-0.97990265578305	chr18	84857811	84858117	+	0	NA	Intergenic	Intergenic	-2870	NM_023149	66054	Mm.29646	NM_023149	ENSMUSG00000024644	Cndp2	0610010E05Rik|C76600|Cn2|Dip-2|Pep-1|Pep1	CNDP dipeptidase 2 (metallopeptidase M20 family)	protein-coding
unique_peak1-5805-8-0-3.00522241794757-2.70926996097583	chr6	67077280	67077799	+	0	NA	Intergenic	Intergenic	-90138	NM_007836	13197	Mm.72235	NM_007836	ENSMUSG00000036390	Gadd45a	AA545191|Ddit1|GADD45	growth arrest and DNA-damage-inducible 45 alpha	protein-coding
unique_peak2-39109-4-6--0.830815435910851-0.989110657569874	chr8	79596793	79597160	+	0	NA	intron (NM_001083906, intron 2 of 8)	L1_Mus3|LINE|L1	170569	NM_001083906	110784	Mm.324393	NM_001083906	ENSMUSG00000031618	Nr3c2	MR|Mlr	nuclear receptor subfamily 3, group C, member 2	protein-coding
common_peak1-13251-22-7-1.6472841050874-2.63337704757512	chr19	32223790	32224711	+	0	NA	intron (NM_144792, intron 6 of 9)	intron (NM_144792, intron 6 of 9)	-46620	NM_018830	54447	Mm.491229	NM_018830	ENSMUSG00000024887	Asah2	AI585898	N-acylsphingosine amidohydrolase 2	protein-coding
common_peak2-30748-17-26--0.53659116395843-0.538442145997695	chr7	119720139	119720934	+	0	NA	intron (NM_020606, intron 10 of 12)	intron (NM_020606, intron 10 of 12)	-102298	NM_001166584	21676	Mm.24685	NM_009346	ENSMUSG00000055320	Tead1	2610024B07Rik|B230114H05Rik|Gtrgeo5|TEAD-1|TEF-1|Tcf13|mTEF-1	TEA domain family member 1	protein-coding
common_peak2-21312-25-75--1.38607760809848-4.87581895109211	chr11	74830922	74832205	+	0	NA	intron (NM_001002764, intron 10 of 18)	intron (NM_001002764, intron 10 of 18)	47930	NR_030454	735274		NR_030454		Mir684-1	Mirn684-1	microRNA 684-1	ncRNA
common_peak1-8023-7-10--0.660340788339108-1.12966497611638	chr1	169699376	169699850	+	0	NA	intron (NM_033652, intron 2 of 7)	intron (NM_033652, intron 2 of 7)	79924	NM_033652	110648	Mm.330081	NM_033652	ENSMUSG00000026686	Lmx1a	Lmx1.1|dr|dreher|sst	LIM homeobox transcription factor 1 alpha	protein-coding
common_peak2-30806-17-14-0.311405742596519-0.466170754204149	chr7	127588734	127589213	+	0	NA	intron (NM_001278944, intron 8 of 29)	L1Md_F2|LINE|L1	23758	NM_001278944	233810		NM_001278943	ENSMUSG00000051900	Abca16	AY243472	ATP-binding cassette, sub-family A (ABC1), member 16	protein-coding
unique_peak1-3101-8-0-3.00522241794757-2.70926996097583	chr18	25700933	25701417	+	0	NA	intron (NM_001146294, intron 2 of 12)	intron (NM_001146294, intron 2 of 12)	211309	NM_133195	108013	Mm.266435	NM_133195	ENSMUSG00000024268	Celf4	A230070D14Rik|BRUNOL-4|Brul4|Brunol4|C130060B05Rik	CUGBP, Elav-like family member 4	protein-coding
unique_peak2-36240-4-7--1.02346051385325-1.09384600808989	chr2	38950618	38950974	+	0	NA	intron (NM_178778, intron 13 of 17)	intron (NM_178778, intron 13 of 17)	-29735	NM_029793	76899	Mm.131098	NM_029793	ENSMUSG00000026754	Golga1	0710001G09Rik|2210418B03Rik|AW107649|Golgi97|golgin-97	golgi autoantigen, golgin subfamily a, 1	protein-coding
unique_peak2-34893-3-5--0.998945590680433-0.96108193396963	chr15	81185716	81186035	+	0	NA	intron (NM_011399, intron 1 of 8)	intron (NM_011399, intron 1 of 8)	5320	NM_011399	20524	Mm.222536	NM_011399	ENSMUSG00000022404	Slc25a17	34kDa|47kDa|PMP34|Pmp47	solute carrier family 25 (mitochondrial carrier, peroxisomal membrane protein), member 17	protein-coding
unique_peak1-6089-8-4-0.683294323060208-1.21878474469819	chr6	124769194	124769692	+	0	NA	exon (NM_013700, exon 14 of 20)	exon (NM_013700, exon 14 of 20)	-5129	NM_009415	21991	Mm.4222	NM_009415	ENSMUSG00000023456	Tpi1	AI255506|Tpi|Tpi-1	triosephosphate isomerase 1	protein-coding
unique_peak1-6321-13-7-0.778472030637769-0.817533494790411	chr7	45605545	45606278	+	0	NA	Intergenic	Intergenic	913993	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak2-26461-10-5-0.771452844287613-1.33892459842472	chr2	75643467	75643811	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-26595	NM_172666	228061	Mm.31227	NM_172666	ENSMUSG00000042410	Agps	5832437L22|9930035G10Rik|AW123847|Adaps|Adas|Adhaps|Adps|Aldhpsy|bs2	alkylglycerone phosphate synthase	protein-coding
unique_peak1-1429-14-5-1.31425365963649-1.4372489031793	chr12	85454708	85455303	+	0	NA	promoter-TSS (NM_028821)	promoter-TSS (NM_028821)	-273	NM_028821	105000	Mm.101525	NM_028821	ENSMUSG00000042523	Dnal1	1700010H15Rik|AW121714|Dnalc1|E330027P08Rik	dynein, axonemal, light chain 1	protein-coding
unique_peak1-812-9-3-1.18961340640422-1.57096726280955	chr11	4262701	4263212	+	0	NA	intron (NM_029458, intron 10 of 10)	Lx8|LINE|L1	78129	NM_029458	75828	Mm.159592	NM_029458	ENSMUSG00000020419	Hormad2	4930529M09Rik	HORMA domain containing 2	protein-coding
unique_peak1-2500-11-5-0.923731083530457-1.477227296591	chr16	13189301	13189870	+	0	NA	Intergenic	Intergenic	-66989	NM_001122667	239719	Mm.270643	NM_153588	ENSMUSG00000009569	Mkl2	ENSMUSG00000075401|Gt4-1|MRTF-B|Mrtfb|mKIAA1243	MKL/myocardin-like 2	protein-coding
common_peak1-19117-14-10-0.439784541720347-0.519648556297791	chr9	75774173	75774754	+	0	NA	Intergenic	Intergenic	-88321	NM_173731	208982	Mm.82306	NM_173731	ENSMUSG00000007908	Hmgcll1	BC037381	3-hydroxymethyl-3-methylglutaryl-Coenzyme A lyase-like 1	protein-coding
unique_peak1-2881-8-3-1.00522241794757-1.39487600375387	chr17	36861071	36861541	+	0	NA	Intergenic	Intergenic	-48549	NM_177637	224761	Mm.246584	NM_177637	ENSMUSG00000037246	H2-M10.5	6.9H	histocompatibility 2, M region locus 10.5	protein-coding
common_peak1-18193-15-7-1.01216475055566-1.08658567012551	chr8	20966813	20967432	+	0	NA	Intergenic	Intergenic	-946730	NR_028428	381598	Mm.359054	NM_001024708	ENSMUSG00000071793	2610005L07Rik	2810038F24Rik|6720476A01Rik	cadherin 11 pseudogene	pseudo
unique_peak2-36122-6-7--0.434601889619698-0.97990265578305	chr2	5286912	5287353	+	0	NA	intron (NM_001290374, intron 2 of 9)	intron (NM_001290374, intron 2 of 9)	228310	NM_028804	74186	Mm.274715	NM_028804	ENSMUSG00000026676	Ccdc3	2310045O21Rik	coiled-coil domain containing 3	protein-coding
common_peak1-10446-122-127-0.581652356961988-3.1972791897212	chr13	104816389	104818540	+	0	NA	intron (NM_029447, intron 12 of 12)	intron (NM_029447, intron 12 of 12)	82230	NM_029447	75805	Mm.127692	NM_029447	ENSMUSG00000021710	Nln	4930472G13Rik|C79345	neurolysin (metallopeptidase M3 family)	protein-coding
unique_peak1-758-9-3-1.18961340640422-1.57096726280955	chr10	120421156	120421725	+	0	NA	Intergenic	Intergenic	-5054	NM_001081193	380664	Mm.339371	NM_001081193	ENSMUSG00000048661	Lemd3	AI316861|Man1	LEM domain containing 3	protein-coding
unique_peak2-39136-2-12--2.61789397440441-2.55640854263862	chr8	84965276	84965928	+	0	NA	Intergenic	L1ME2|LINE|L1	-39117	NM_008357	16168	Mm.4392	NM_008357		Il15	AI503618|IL-15	interleukin 15	protein-coding
common_peak2-26325-38-80--0.768397343586094-2.0567716791101	chr2	33886778	33888032	+	0	NA	Intergenic	Intergenic	-143939	NM_175184	72543	Mm.254914	NM_175184	ENSMUSG00000038740	Mvb12b	2610200O14Rik|2610528K11Rik|AI414895|Fam125b	multivesicular body subunit 12B	protein-coding
common_peak2-20265-50-67--0.0465225247713867-0.302662697069732	chr1	189726923	189728294	+	0	NA	intron (NM_001243792, intron 2 of 7)	intron (NM_001243792, intron 2 of 7)	-94098	NM_011935	26381	Mm.89989	NM_011935	ENSMUSG00000026610	Esrrg	ERR3|Errg|NR3B3|mKIAA0832	estrogen-related receptor gamma	protein-coding
common_peak2-31869-7-6--0.00826409175941478-0.97990265578305	chr9	54641544	54641942	+	0	NA	Intergenic	Lx5|LINE|L1	29188	NM_013496	12903	Mm.34797	NM_013496	ENSMUSG00000032291	Crabp1	AI326249|CRABP-I|Crabp-1|CrabpI|Rbp-5	cellular retinoic acid binding protein I	protein-coding
unique_peak2-32868-10-18--0.891512168434816-0.804350088532826	chr10	5823326	5823946	+	0	NA	intron (NM_001195672, intron 5 of 10)	intron (NM_001195672, intron 5 of 10)	13033	NM_001195672	100504234	Mm.291807	NM_001195672	ENSMUSG00000019767	Ccdc170	Gm221	coiled-coil domain containing 170	protein-coding
unique_peak1-2652-7-0-2.79909083029819-2.40823996531185	chr16	49840742	49841218	+	0	NA	Intergenic	Lx8|LINE|L1	-14787	NM_010581	16423	Mm.31752	NM_010581	ENSMUSG00000055447	Cd47	9130415E20Rik|AA407862|AI848868|AW108519|B430305P08Rik|IAP|Itgp	CD47 antigen (Rh-related antigen, integrin-associated signal transducer)	protein-coding
common_peak2-20146-16-26--0.636623859895407-0.713114929964887	chr1	167386666	167387460	+	0	NA	intron (NM_028759, intron 1 of 18)	B4A|SINE|B4	3531	NM_028759	74106	Mm.227605	NM_028759	ENSMUSG00000026571	Dcaf6	1200006M05Rik|Iqwd1|PC326	DDB1 and CUL4 associated factor 6	protein-coding
common_peak1-12010-76-169--0.64744655027442-3.13525688026429	chr17	14977852	14979716	+	0	NA	intron (NM_175173, intron 23 of 24)	intron (NM_175173, intron 23 of 24)	101345	NM_175173	71682	Mm.122698	NM_175173	ENSMUSG00000046991	Wdr27	0610012K18Rik	WD repeat domain 27	protein-coding
unique_peak2-34654-7-8--0.370834171144123-1.00793137938329	chr14	120287720	120288155	+	0	NA	Intergenic	Intergenic	139488	NR_045621	75432	Mm.443277	NR_045621		1700006F04Rik	-	RIKEN cDNA 1700006F04 gene	ncRNA
common_peak1-10166-9-26--1.56527409575925-2.17218792383888	chr13	38037234	38037852	+	0	NA	intron (NM_001177869, intron 10 of 11)	intron (NM_001177869, intron 10 of 11)	48516	NM_025965	107513	Mm.426670	NM_025965	ENSMUSG00000021427	Ssr1	2510001K09Rik|6330400D04|AI159733|AI452176|SSR|TRAPA	signal sequence receptor, alpha	protein-coding
common_peak2-20275-19-15-0.402687326661686-0.519193887192487	chr1	191075164	191075708	+	0	NA	intron (NM_001281847, intron 5 of 6)	intron (NM_001281847, intron 5 of 6)	91796	NM_001159850	16526	Mm.33304	NM_010607	ENSMUSG00000037624	Kcnk2	A430027H14Rik|AI848635|TREK-1	potassium channel, subfamily K, member 2	protein-coding
common_peak1-8982-12-13--0.158578936969966-0.301029995663979	chr11	59191228	59191747	+	0	NA	Intergenic	Intergenic	-2332	NM_001045521	216797	Mm.339586	NM_001045521	ENSMUSG00000049291	Prss38	Gm249|Mpn2	protease, serine 38	protein-coding
unique_peak1-5226-8-2-1.42025991722641-1.65811743852845	chr5	38551836	38552326	+	0	NA	Intergenic	Intergenic	-1375	NM_010942	18196	Mm.7414	NM_010942	ENSMUSG00000029126	Nsg1	Neep21|m234|p21	neuron specific gene family member 1	protein-coding
unique_peak1-182-10-3-1.35641534500877-1.75805390616669	chr1	74748672	74749146	+	0	NA	Intergenic	Intergenic	-11239	NM_024264	104086	Mm.85083	NM_024264	ENSMUSG00000026170	Cyp27a1	1300013A03Rik|Cyp27	cytochrome P450, family 27, subfamily a, polypeptide 1	protein-coding
unique_peak1-4019-14-4-1.57728806547028-2.4322161449009	chr2	38546633	38547210	+	0	NA	Intergenic	Intergenic	23141	NM_139051	26423	Mm.31387	NM_139051	ENSMUSG00000026751	Nr5a1	Ad4BP|ELP|ELP-3|Ftz-F1|Ftzf1|SF-1|SF1	nuclear receptor subfamily 5, group A, member 1	protein-coding
common_peak2-25917-12-12--0.0516637330534535-0.309718203022949	chr19	46357080	46357596	+	0	NA	intron (NM_178930, intron 33 of 39)	intron (NM_178930, intron 33 of 39)	-21889	NM_001177369	18034	Mm.102365	NM_019408	ENSMUSG00000025225	Nfkb2	NF-kappaB2|lyt|p49|p49/p100|p50B|p52	nuclear factor of kappa light polypeptide gene enhancer in B cells 2, p49/p100	protein-coding
common_peak1-11407-45-79--0.461570069542491-1.00278553979691	chr15	98830533	98832268	+	0	NA	Intergenic	B3|SINE|B2	15004	NR_045991	75951	Mm.441657	NR_045991	ENSMUSG00000097587	4930578M01Rik	3010001K12Rik	RIKEN cDNA 4930578M01 gene	ncRNA
common_peak2-30445-16-17--0.0516613591742505-0.301029995663984	chr7	45123822	45124408	+	0	NA	Intergenic	Intergenic	1395789	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
unique_peak2-33152-7-7--0.200909169701811-0.97990265578305	chr10	86784211	86784634	+	0	NA	Intergenic	L1_Mus2|LINE|L1	171983	NM_008553	17172	Mm.136217	NM_008553	ENSMUSG00000020052	Ascl1	AI225900|ASH1|Mash1|bHLHa46	achaete-scute complex homolog 1 (Drosophila)	protein-coding
common_peak2-21778-16-18--0.129663871175524-0.307235046933848	chr11	117255852	117256797	+	0	NA	Intergenic	Intergenic	62697	NM_001113488	53860	Mm.38450	NM_017380	ENSMUSG00000059248	Sept9	MSF1|Msf|PNUTL4|Sint1	septin 9	protein-coding
common_peak1-16685-76-94-0.192088777532334-0.541929932969571	chr6	11925410	11926878	+	0	NA	intron (NM_001168382, intron 7 of 17)	L1_Mus1|LINE|L1	50263	NM_001168382	75725	Mm.212411	NM_029404	ENSMUSG00000029629	Phf14	1110001C23Rik|4932409F11Rik|5730446A07Rik|AA623952|AV297001|mKIAA0783	PHD finger protein 14	protein-coding
common_peak2-31057-338-510-0.358747493593555-4.23011320199384	chr8	20121689	20124432	+	0	NA	Intergenic	Intergenic	-102668	NR_028428	381598	Mm.359054	NM_001024708	ENSMUSG00000071793	2610005L07Rik	2810038F24Rik|6720476A01Rik	cadherin 11 pseudogene	pseudo
common_peak2-32388-17-31--0.781703661794962-0.932560489028298	chrX	129749554	129750626	+	0	NA	Intergenic	Intergenic	473442	NM_001105245	279653	Mm.39738	NM_001105245	ENSMUSG00000051323	Pcdh19	B530002L05Rik|Gm717|mKIAA1313	protocadherin 19	protein-coding
common_peak1-12346-25-25-0.161410187204014-0.36542888694933	chr17	56183038	56183841	+	0	NA	intron (NM_013733, intron 1 of 13)	intron (NM_013733, intron 1 of 13)	3600	NM_013733	27221	Mm.391010	NM_013733	ENSMUSG00000002835	Chaf1a	AL023013|AL024058|CAF-1|Cac1p	chromatin assembly factor 1, subunit A (p150)	protein-coding
unique_peak1-6924-16-5-1.53330114154691-1.80287260729378	chr8	106613379	106614164	+	0	NA	Intergenic	B4A|SINE|B4	-11754	NM_009868	12562	Mm.21767	NM_009868	ENSMUSG00000031871	Cdh5	7B4|AA408225|Cd144|VE-Cad|VECD|VEcad|Vec	cadherin 5	protein-coding
unique_peak1-163-41-12-2.00070898670757-6.15378020477106	chr1	74008063	74009828	+	0	NA	intron (NM_001289895, intron 18 of 32)	intron (NM_001289895, intron 18 of 32)	-97905	NR_045311	109198	Mm.359721	NR_045311		6030407O03Rik	-	RIKEN cDNA 6030407O03 gene	ncRNA
common_peak2-29196-23-25-0.0213277863679888-0.30528805757448	chr5	136052833	136053705	+	0	NA	Intergenic	B1F1|SINE|Alu	-4356	NM_019577	56221	Mm.31505	NM_019577	ENSMUSG00000004814	Ccl24	CKb-6|MPIF-2|Scya24	chemokine (C-C motif) ligand 24	protein-coding
common_peak1-13566-10-10--0.103016273628528-0.301029995663987	chr2	6379257	6379898	+	0	NA	Intergenic	Intergenic	105795	NM_181399	98910	Mm.40673	NM_181399	ENSMUSG00000039046	Usp6nl	AI316785|RNTRE|TRE2NL|mKIAA0019	USP6 N-terminal like	protein-coding
common_peak1-8235-22-21-0.187852486450107-0.376654945067947	chr10	13552899	13553817	+	0	NA	intron (NM_025446, intron 1 of 5)	intron (NM_025446, intron 1 of 5)	35278	NM_025446	66253	Mm.45755	NM_025446	ENSMUSG00000019806	Aig1	1500031O19Rik|AV064870|AW413422|CGI-103	androgen-induced 1	protein-coding
common_peak1-11624-23-9-1.39983940962172-2.17218792383888	chr16	20370459	20371446	+	0	NA	intron (NM_013790, intron 17 of 29)	intron (NM_013790, intron 17 of 29)	-45475	NM_183158	224044	Mm.276400	NM_183158	ENSMUSG00000022818	Cyp2ab1	EG224044|F730023N20	cytochrome P450, family 2, subfamily ab, polypeptide 1	protein-coding
common_peak1-11628-12-13--0.158578936969966-0.301029995663979	chr16	20535506	20536047	+	0	NA	intron (NM_009679, intron 1 of 10)	CpG	199	NM_009679	11773	Mm.18946	NM_009679	ENSMUSG00000022841	Ap2m1	-	adaptor-related protein complex 2, mu 1 subunit	protein-coding
unique_peak1-86-15-3-2.01216475055566-3.03427613622886	chr1	43412827	43413758	+	0	NA	Intergenic	MER2|DNA|MER2_type	-89304	NM_010879	17974	Mm.389903	NM_010879	ENSMUSG00000066877	Nck2	4833426I10Rik|Grb4|NCKbeta|Nck-2	non-catalytic region of tyrosine kinase adaptor protein 2	protein-coding
common_peak2-20833-17-11-0.633333837483882-0.769930178837768	chr11	70647266	70647881	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	-10690	NM_001291143	54189	Mm.7087	NM_019400	ENSMUSG00000020817	Rabep1	Rab5ep|rabaptin-5|rabaptin-5alpha	rabaptin, RAB GTPase binding effector protein 1	protein-coding
common_peak1-12447-50-100--0.617271166272842-1.82396640699898	chr17	80727281	80728701	+	0	NA	intron (NM_001145452, intron 1 of 17)	PB1D10|SINE|Alu	21244	NM_001145452	381112	Mm.360004	NM_001145452	ENSMUSG00000054901	Arhgef33	Gm941	Rho guanine nucleotide exchange factor (GEF) 33	protein-coding
common_peak1-9486-23-22-0.198205548452068-0.373496418836697	chr11	106998728	106999738	+	0	NA	Intergenic	Intergenic	-5997	NM_176850	207165	Mm.343986	NM_176850	ENSMUSG00000040481	Bptf	9430093H17Rik|Falz	bromodomain PHD finger transcription factor	protein-coding
common_peak2-26378-21-14-0.662598669657717-0.879255460030357	chr2	45116687	45117427	+	0	NA	Intergenic	Intergenic	-148258	NM_015753	24136	Mm.440702	NM_015753	ENSMUSG00000026872	Zeb2	9130203F04Rik|D130016B08Rik|SIP1|Zfhx1b|Zfx1b|Zfxh1b	zinc finger E-box binding homeobox 2	protein-coding
common_peak2-26964-13-27--1.02888289141984-1.21173582416604	chr2	165992701	165993309	+	0	NA	Intergenic	Intergenic	-11822	NM_028072	72043	Mm.1011	NM_028072	ENSMUSG00000006800	Sulf2	2010004N24Rik|AU020235|MSulf-2|mKIAA1247	sulfatase 2	protein-coding
common_peak2-23523-19-11-0.81772482594053-0.991115276827166	chr15	77273523	77274045	+	0	NA	intron (NM_001024848, intron 1 of 4)	RLTR19-int|LTR|ERVK	4106	NM_001024848	278679	Mm.440965	NM_001024848	ENSMUSG00000068252	Apol7b	-	apolipoprotein L 7b	protein-coding
common_peak2-21043-10-7-0.356415345008769-1.12966497611638	chr11	35972917	35973241	+	0	NA	intron (NM_001290702, intron 8 of 27)	L1MC4a|LINE|L1	-179488	NM_170779	211652	Mm.31267	NM_170779		Wwc1	AA408228|AU017197|BC037006|Kibra|mKIAA0869	WW, C2 and coiled-coil domain containing 1	protein-coding
common_peak1-16737-33-13-1.52398264046792-3.43266191012053	chr6	31098119	31099811	+	0	NA	intron (NR_110471, intron 2 of 3)	intron (NR_110471, intron 2 of 3)	69509	NR_110470	232685	Mm.443019	NM_144555		Lincpint	MNCb-1768|Pint|linc-Pint	long intergenic non-protein coding RNA, Trp53 induced transcript	ncRNA
unique_peak1-4368-9-3-1.18961340640422-1.57096726280955	chr2	157070586	157071186	+	0	NA	intron (NM_001039557, intron 8 of 24)	intron (NM_001039557, intron 8 of 24)	-33948	NM_019642	20014	Mm.22130	NM_019642	ENSMUSG00000027642	Rpn2	1300012C06Rik|AV261018|Rpn-2	ribophorin II	protein-coding
common_peak2-29085-11-21--0.950738034385684-0.991115276827166	chr5	121397805	121398619	+	0	NA	intron (NM_011286, intron 16 of 21)	intron (NM_011286, intron 16 of 21)	33385	NM_133893	100535	Mm.247620	NM_133893	ENSMUSG00000032623	Oas1d	AA536864|C85127|oasl8	2'-5' oligoadenylate synthetase 1D	protein-coding
unique_peak2-33791-7-8--0.370834171144123-1.00793137938329	chr11	120086345	120086790	+	0	NA	Intergenic	Intergenic	-7694	NM_198423	268515	Mm.309498	NM_198423	ENSMUSG00000039741	Bahcc1	B930044J06|BC060615	BAH domain and coiled-coil containing 1	protein-coding
common_peak1-15494-17-31--0.781703661794962-0.932560489028298	chr4	109666709	109667485	+	0	NA	Intergenic	Lx7|LINE|L1	16467	NM_172296	242620	Mm.32825	NM_172296	ENSMUSG00000047143	Dmrta2	Dmrt5	doublesex and mab-3 related transcription factor like family A2	protein-coding
common_peak1-11726-27-37--0.256381562548349-0.379775532323854	chr16	32913697	32914719	+	0	NA	promoter-TSS (NM_001081255)	promoter-TSS (NM_001081255)	22	NM_001081255	70144	Mm.491178	NM_001081255	ENSMUSG00000022801	Lrch3	2210409B11Rik|AW215594|Gm1742	leucine-rich repeats and calponin homology (CH) domain containing 3	protein-coding
common_peak1-13041-66-56-0.6855936502611-2.22174510361786	chr19	5740741	5743420	+	0	NA	5' UTR (NM_008520, exon 2 of 28)	5' UTR (NM_008520, exon 2 of 28)	1176	NM_008520	16998	Mm.182396	NM_008520	ENSMUSG00000024940	Ltbp3	Ltbp2|mFLJ00070	latent transforming growth factor beta binding protein 3	protein-coding
common_peak2-27957-16-11-0.533301141546906-0.58239619684445	chr4	40269421	40269920	+	0	NA	Intergenic	Intergenic	9405	NR_040663	75819	Mm.399244	NR_040663	ENSMUSG00000087137	4930509K18Rik	-	RIKEN cDNA 4930509K18 gene	ncRNA
unique_peak1-6616-14-1-2.89921616035764-3.91338994363176	chr8	4391656	4392298	+	0	NA	Intergenic	Intergenic	42389	NM_009138	20300	Mm.7275	NM_009138	ENSMUSG00000023235	Ccl25	A130072A22Rik|AI852536|CKb15|Scya25|TECK	chemokine (C-C motif) ligand 25	protein-coding
unique_peak1-6957-6-3-0.565398110380302-1.08602067057793	chr8	111853827	111854311	+	0	NA	Intergenic	Intergenic	10739	NR_002928	384864	Mm.390083	NR_002928		Gm1943	-	WD repeat domain 70 pseudogene	pseudo
unique_peak2-37707-5-18--1.95230784944944-1.99473478107052	chr5	103760364	103760997	+	0	NA	Intergenic	Intergenic	-32632	NR_040699	74624	Mm.389662	NR_040699		4930429D17Rik	-	RIKEN cDNA 4930429D17 gene	ncRNA
common_peak2-23772-12-15--0.351224014912361-0.332077462497413	chr15	98692477	98693228	+	0	NA	exon (NM_001033276, exon 12 of 55)	exon (NM_001033276, exon 12 of 55)	8784	NM_001033276	381022	Mm.264889	NM_001033276	ENSMUSG00000048154	Kmt2d	ALR|BC032281|BC058659|C430014K11Rik|KMT2B|Mll2|Mll4	lysine (K)-specific methyltransferase 2D	protein-coding
common_peak2-31720-7-9--0.522837264589173-1.05908390183068	chr9	4376589	4377028	+	0	NA	Intergenic	Intergenic	-6729	NM_145609	78100	Mm.206549	NM_145609	ENSMUSG00000041124	Msantd4	8430410K20Rik|Mysantd4	Myb/SANT-like DNA-binding domain containing 4 with coiled-coils	protein-coding
common_peak1-15311-9-12--0.510826311736872-0.394412252720706	chr4	44981255	44981775	+	0	NA	Intergenic	Intergenic	-12768	NM_080289	76238	Mm.196574	NM_080289	ENSMUSG00000035637	Grhpr	1110059D05Rik|6430629L09Rik	glyoxylate reductase/hydroxypyruvate reductase	protein-coding
unique_peak2-35790-4-10--1.48289213249054-1.5150158574804	chr18	56506734	56507170	+	0	NA	Intergenic	ORR1A3-int|LTR|MaLR	-84834	NM_026240	107022	Mm.24356	NM_026240	ENSMUSG00000001700	Gramd3	9030613F08Rik|9130427A09Rik|AW061306|NS3TP2	GRAM domain containing 3	protein-coding
unique_peak2-33922-2-11--2.50241675698448-2.32232533660526	chr12	69536838	69537372	+	0	NA	Intergenic	L1Md_T|LINE|L1	723068	NM_009093	20090	Mm.379006	NM_009093	ENSMUSG00000034892	Rps29	-	ribosomal protein S29	protein-coding
common_peak1-10103-23-6-1.91441258245148-3.22740510021752	chr13	28607436	28608295	+	0	NA	intron (NR_045053, intron 7 of 8)	intron (NR_045053, intron 7 of 8)	194877	NR_105787	102466635		NR_105787	miRBase:MI0021897	Mir6368	mmu-mir-6368	microRNA mir-6368	ncRNA
unique_peak1-4866-11-5-0.923731083530457-1.477227296591	chr4	9675589	9676113	+	0	NA	Intergenic	Intergenic	-21881	NR_030693	320152	Mm.159946	NR_030693		4930412C18Rik	5730591J02Rik	RIKEN cDNA 4930412C18 gene	ncRNA
unique_peak1-2241-25-3-2.86184990534511-5.6100962539031	chr15	76616610	76617741	+	0	NA	intron (NM_198420, intron 1 of 10)	B1_Mur2|SINE|Alu	31425	NM_001168288	223666	Mm.322931	NM_198420	ENSMUSG00000033697	Arhgap39	9530053N22|AI843066|D15Wsu169e|Kiaa1688|Porf-2	Rho GTPase activating protein 39	protein-coding
common_peak2-29863-21-25--0.130950452874856-0.305461879681376	chr6	106768749	106770048	+	0	NA	Intergenic	MamRep4096|DNA|hAT?	-19317	NM_175357	58799	Mm.290085	NM_021449		Crbn	2610203G15Rik|2900045O07Rik|AF229032|AW108261|piL	cereblon	protein-coding
common_peak1-14766-24-14-0.886319307159198-1.33403699391683	chr3	88488546	88489552	+	0	NA	promoter-TSS (NM_028814)	promoter-TSS (NM_028814)	-667	NM_028814	74200	Mm.251800	NM_028814	ENSMUSG00000028060	2810403A07Rik	A430106P18Rik|AI256352|AI451678|Blom7|Kiaa0907	RIKEN cDNA 2810403A07 gene	protein-coding
unique_peak1-6998-13-5-1.19350952991661-1.95509489018123	chr8	122460706	122461185	+	0	NA	intron (NM_009462, intron 3 of 13)	ORR1A4|LTR|MaLR	26193	NM_009462	22224	Mm.256910	NM_009462	ENSMUSG00000031826	Usp10	2610014N07Rik|UBPO|Uchrp|mKIAA0190	ubiquitin specific peptidase 10	protein-coding
common_peak2-21498-5-6--0.511735258063458-0.947717972411649	chr11	89023290	89023570	+	0	NA	Intergenic	Intergenic	88275	NM_001033266	217071	Mm.342127	NM_001033266	ENSMUSG00000072553	Gm525	-	predicted gene 525	protein-coding
unique_peak2-38631-2-78--5.22123500444042-20.3216696906124	chr7	81213283	81214443	+	0	NA	Intergenic	Intergenic	-55295	NM_009181	20450	Mm.4954	NM_009181	ENSMUSG00000025789	St8sia2	AI323367|ST8SiaII|STX|Siat8b	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2	protein-coding
common_peak2-26033-17-15-0.218296338205038-0.403453972741633	chr19	61140480	61141314	+	0	NA	intron (NM_018869, intron 4 of 15)	intron (NM_018869, intron 4 of 15)	111315	NM_001177513	633057	Mm.426097	NM_001177513	ENSMUSG00000094649	Gm7102	EG633057	predicted gene 7102	protein-coding
unique_peak2-35719-2-6--1.72480917832092-1.26211192963361	chr18	34005966	34006280	+	0	NA	intron (NM_013512, intron 13 of 23)	intron (NM_013512, intron 13 of 23)	51577	NR_038151	69749	Mm.248787	NR_038151	ENSMUSG00000087590	2410004N09Rik	-	RIKEN cDNA 2410004N09 gene	ncRNA
common_peak2-30176-13-12-0.0780323124966764-0.334470287753051	chr7	81788892	81789399	+	0	NA	Intergenic	Intergenic	-89479	NM_001038643	108116	Mm.425467	NM_023908	ENSMUSG00000025790	Slco3a1	5830414C08Rik|Anr1|MJAM|OATP-D|R75096|Slc21a11	solute carrier organic anion transporter family, member 3a1	protein-coding
common_peak1-9876-17-35--0.951628663237274-1.34608670144205	chr12	84193068	84193967	+	0	NA	intron (NM_001282061, intron 13 of 16)	intron (NM_001282061, intron 13 of 16)	-153375	NR_046045	74283	Mm.398247	NR_046045		1700085C21Rik	-	RIKEN cDNA 1700085C21 gene	ncRNA
unique_peak2-35649-1-8--2.79698201165906-2.05605744720049	chr18	61259581	61260031	+	0	NA	Intergenic	Intergenic	-5420	NM_001037859	12978	Mm.22574	NM_007779	ENSMUSG00000024621	Csf1r	AI323359|CD115|CSF-1R|Csfmr|Fim-2|Fms|M-CSF-R|M-CSFR	colony stimulating factor 1 receptor	protein-coding
common_peak1-12146-10-4-1.03448725012141-1.5150158574804	chr17	27914925	27915414	+	0	NA	intron (NM_001033279, intron 3 of 4)	intron (NM_001033279, intron 3 of 4)	42318	NM_001033279	224647	Mm.196577	NM_001033279	ENSMUSG00000056692	D17Wsu92e	AU020189|C030010A15|C80239	DNA segment, Chr 17, Wayne State University 92, expressed	protein-coding
unique_peak1-6908-25-11-1.27688740462395-2.12469164491494	chr8	105340015	105341265	+	0	NA	Intergenic	Intergenic	-31629	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
unique_peak1-6188-9-3-1.18961340640422-1.57096726280955	chr6	146978751	146979278	+	0	NA	3' UTR (NM_026221, exon 27 of 27)	3' UTR (NM_026221, exon 27 of 27)	-2045	NM_025620	66532	Mm.45888	NM_025620	ENSMUSG00000040121	Rep15	2210417D09Rik	RAB15 effector protein	protein-coding
unique_peak1-359-14-3-1.89921616035764-2.80787975886178	chr1	138346734	138347571	+	0	NA	Intergenic	Intergenic	-17273	NM_001287179	381293	Mm.458468	NM_001081258	ENSMUSG00000041498	Kif14	D1Ertd367e|E130203M01	kinesin family member 14	protein-coding
common_peak2-30996-25-26-0.106962403181638-0.336580821310522	chr8	8392630	8393557	+	0	NA	Intergenic	ORR1C1|LTR|MaLR	267680	NM_010111	13642	Mm.209813	NM_010111	ENSMUSG00000001300	Efnb2	ELF-2|Epl5|Eplg5|Htk-L|LERK-5|Lerk5|NLERK-1	ephrin B2	protein-coding
common_peak2-31035-9-7-0.18961340640422-1.05908390183068	chr8	13652023	13652495	+	0	NA	intron (NM_009025, intron 1 of 23)	intron (NM_009025, intron 1 of 23)	25328	NM_009025	19414	Mm.18517	NM_009025	ENSMUSG00000031453	Rasa3	AI326412|C86362|E130011G04|GAPIII|scat	RAS p21 protein activator 3	protein-coding
common_peak2-23510-6-9--0.75652998450706-1.11707584880836	chr15	76576365	76576666	+	0	NA	intron (NM_198420, intron 3 of 10)	intron (NM_198420, intron 3 of 10)	-22240	NM_176828	223665	Mm.291713	NM_145472	ENSMUSG00000079002	C030006K11Rik	1110033I13Rik	RIKEN cDNA C030006K11 gene	protein-coding
common_peak1-12769-50-43-0.581508697841655-1.3628545831955	chr18	60890717	60892449	+	0	NA	Intergenic	L2a|LINE|L2	-18540	NM_008306	15531	Mm.181862	NM_008306	ENSMUSG00000054008	Ndst1	1200015G06Rik|Hsst|NDST-1|b2b2230Clo	N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1	protein-coding
unique_peak2-38836-9-14--0.717277189204299-0.53895475198017	chr7	141838281	141839206	+	0	NA	Intergenic	Intergenic	-23627	NM_001033420	330662	Mm.436572	NM_001033420	ENSMUSG00000058325	Dock1	9130006G06Rik|AI854900|D630004B07Rik	dedicator of cytokinesis 1	protein-coding
common_peak1-9202-28-12-1.35251940168037-2.51395164919446	chr11	80765790	80766992	+	0	NA	intron (NM_001034013, intron 2 of 9)	MLT1D|LTR|MaLR	94500	NM_029367	75622	Mm.26988	NM_029367	ENSMUSG00000053184	Spaca3	1700025M08Rik|ALLP17|Lyc3|SLLP1|mSLLP1	sperm acrosome associated 3	protein-coding
unique_peak1-2102-8-4-0.683294323060208-1.21878474469819	chr15	38710646	38711127	+	0	NA	Intergenic	Intergenic	-54569	NM_080640	118452	Mm.233837	NM_080640		Baalc	2810457D07Rik	brain and acute leukemia, cytoplasmic	protein-coding
common_peak2-27831-30-57--0.688305585635699-1.33966217785262	chr3	146520857	146521836	+	0	NA	intron (NM_027594, intron 1 of 20)	intron (NM_027594, intron 1 of 20)	6015	NM_027594	70892	Mm.187793	NM_027594	ENSMUSG00000036745	Ttll7	1110049N09Rik|4921517B04Rik|C630030B20|Ttll7s	tubulin tyrosine ligase-like family, member 7	protein-coding
unique_peak2-38400-7-9--0.522837264589173-1.05908390183068	chr7	19671835	19672285	+	0	NA	promoter-TSS (NR_037282)	promoter-TSS (NR_037282)	-117	NR_037282	100526504		NR_037282		Mir3100	mmu-mir-3100	microRNA 3100	ncRNA
common_peak1-8681-21-16-0.482026424015896-0.650819692678078	chr11	9010506	9011570	+	0	NA	Intergenic	Intergenic	-6973	NM_001159401	22271	Mm.4610	NM_009477	ENSMUSG00000020407	Upp1	AI325217|UPase|UdRPase|Up|Upp	uridine phosphorylase 1	protein-coding
common_peak2-21856-18-14-0.406028555619833-0.532159081577619	chr11	121721014	121721631	+	0	NA	Intergenic	MurSatRep1|Unknown|Unknown	29790	NM_029049	74675	Mm.61213	NM_029049	ENSMUSG00000039198	Ptchd3	4930451E13Rik|4933440L20Rik|RNDEu-3	patched domain containing 3	protein-coding
common_peak1-7780-42-49-0.0984731380924595-0.353756356258769	chr1	93753776	93755506	+	0	NA	Intergenic	Intergenic	56587	NM_007855	13345	Mm.9474	NM_007855	ENSMUSG00000007805	Twist2	Dermo1|bHLHa39	twist basic helix-loop-helix transcription factor 2	protein-coding
common_peak2-21356-18-29--0.593971444380167-0.662033714151235	chr11	78037786	78038463	+	0	NA	exon (NM_009297, exon 18 of 37)	exon (NM_009297, exon 18 of 37)	21081	NM_009297	20926	Mm.20755	NM_009297	ENSMUSG00000002052	Supt6	5131400N11Rik|AI132449|SPT6|Supt6h|mKIAA0162	suppressor of Ty 6	protein-coding
unique_peak2-35133-5-8--0.874305337448166-1.10484139239135	chr16	30512068	30512485	+	0	NA	3' UTR (NM_172614, exon 10 of 10)	3' UTR (NM_172614, exon 10 of 10)	38388	NM_172614	224090	Mm.241459	NM_172614		Tmem44	1700007N03Rik|9330161C17Rik|B230220N21	transmembrane protein 44	protein-coding
unique_peak2-39805-4-9--1.34538860874061-1.36011389749466	chrX	20950038	20950550	+	0	NA	Intergenic	MTE2a|LTR|MaLR	12303	NR_045668	331392	Mm.23126	NM_198633	ENSMUSG00000051537	Gm5124	EG331392	nucleolar and coiled-body phosphoprotein 1 pseudogene	pseudo
unique_peak2-34327-2-7--1.91745425626332-1.45399745587252	chr13	97503564	97504148	+	0	NA	Intergenic	Lx2B|LINE|L1	-62965	NM_008255	15357	Mm.316652	NM_008255	ENSMUSG00000021670	Hmgcr	HMG-CoAR|Red	3-hydroxy-3-methylglutaryl-Coenzyme A reductase	protein-coding
common_peak1-10380-37-49--0.117863118288906-0.321605260051241	chr13	94358290	94359730	+	0	NA	Intergenic	B1_Mur4|SINE|Alu	48703	NM_016668	12116	Mm.329582	NM_016668	ENSMUSG00000074768	Bhmt	-	betaine-homocysteine methyltransferase	protein-coding
common_peak2-25304-17-11-0.633333837483882-0.769930178837768	chr18	73835487	73835999	+	0	NA	intron (NM_008540, intron 2 of 11)	MER21B|LTR|ERV1	27652	NM_008540	17128	Mm.100399	NM_008540	ENSMUSG00000024515	Smad4	AW743858|D18Wsu70e|DPC4|Madh4	SMAD family member 4	protein-coding
unique_peak1-4965-6-2-0.980435609659146-1.26211192963361	chr4	105245198	105245710	+	0	NA	Intergenic	L1Md_F2|LINE|L1	415502	NM_080555	67916	Mm.348326	NM_080555	ENSMUSG00000028517	Ppap2b	1110003O22Rik|2610002D05Rik|AV025606|D4Bwg0538e|D4Bwg1535e|Lpp3|Ppab2b	phosphatidic acid phosphatase type 2B	protein-coding
common_peak2-20740-79-161--0.511014835708004-2.05390709342221	chr10	108161126	108163557	+	0	NA	intron (NM_009306, intron 3 of 10)	intron (NM_009306, intron 3 of 10)	-25125	NM_203660	368203	Mm.452758	NM_203660		Gm5136	C6.1AL|EG368203	predicted gene 5136	protein-coding
common_peak2-25442-15-17--0.157760250886656-0.307611222530528	chr19	4064225	4064909	+	0	NA	Intergenic	MMVL30-int|LTR|ERV1	-5273	NM_144869	225884	Mm.440201	NM_144869	ENSMUSG00000058216	BC021614	-	cDNA sequence BC021614	protein-coding
common_peak1-14847-38-21-1.11202104066123-2.65769701904854	chr3	94820869	94821872	+	0	NA	Intergenic	Intergenic	-2210	NM_030074	78266	Mm.389478	NM_030074	ENSMUSG00000019338	Zfp687	4931408L03Rik|Znf687|mKIAA1441	zinc finger protein 687	protein-coding
unique_peak1-4317-6-0-2.5653981103803-2.10720996964787	chr2	150784674	150785125	+	0	NA	intron (NM_207204, intron 11 of 23)	intron (NM_207204, intron 11 of 23)	49569	NM_001163476	69270	Mm.271603	NM_027014	ENSMUSG00000027454	Gins1	2810418N01Rik|Gins4|PSF1|mKIAA0186	GINS complex subunit 1 (Psf1 homolog)	protein-coding
common_peak2-29994-15-16--0.075298090694683-0.301029995663976	chr6	122874316	122875104	+	0	NA	intron (NM_199311, intron 1 of 5)	intron (NM_199311, intron 1 of 5)	2844	NM_199311	269799	Mm.297275	NM_199311	ENSMUSG00000049037	Clec4a1	BC049354|Dcir4	C-type lectin domain family 4, member a1	protein-coding
common_peak2-24668-118-253--0.464892003649591-2.67672143598605	chr17	36270678	36272101	+	0	NA	Intergenic	RMER21A|LTR|ERV1	-5019	NM_001177467	630294	Mm.484916	NM_001177467	ENSMUSG00000092243	Gm7030	EG630294|H2-t9	predicted gene 7030	protein-coding
common_peak2-30475-10-7-0.356415345008769-1.12966497611638	chr7	49317331	49317787	+	0	NA	Intergenic	Intergenic	-3208	NM_001105056	628444	Mm.469901	NM_001105056	ENSMUSG00000092032	Vmn2r59	EG628444	vomeronasal 2, receptor 59	protein-coding
unique_peak1-1209-7-2-1.21412832957703-1.45399745587252	chr11	106195147	106195650	+	0	NA	intron (NM_133199, intron 13 of 23)	intron (NM_133199, intron 13 of 23)	15306	NM_133199	110880	Mm.432528	NM_133199	ENSMUSG00000001027	Scn4a	Nav1.4|SkM1|mH2	sodium channel, voltage-gated, type IV, alpha	protein-coding
common_peak2-21165-14-21--0.560215458279653-0.519193887192484	chr11	58954662	58955723	+	0	NA	Intergenic	Intergenic	-5315	NM_199152	380698	Mm.339542	NM_199152	ENSMUSG00000061462	Obscn	BC046431|Gm878|OTTMUSG00000005786|UNC89	obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF	protein-coding
unique_peak2-34162-2-6--1.72480917832092-1.26211192963361	chr13	30309217	30309528	+	0	NA	intron (NM_153546, intron 4 of 12)	intron (NM_153546, intron 4 of 12)	81013	NM_153546	218121	Mm.89682	NM_153546	ENSMUSG00000038732	Mboat1	9130215M02Rik|BC023845|LPEAT1|Moact1|Oact1	membrane bound O-acyltransferase domain containing 1	protein-coding
common_peak1-8866-62-85--0.0155132959000133-0.301029995663939	chr11	35769056	35770428	+	0	NA	intron (NM_170779, intron 1 of 22)	intron (NM_170779, intron 1 of 22)	23849	NM_170779	211652	Mm.31267	NM_170779		Wwc1	AA408228|AU017197|BC037006|Kibra|mKIAA0869	WW, C2 and coiled-coil domain containing 1	protein-coding
common_peak2-23447-12-9-0.326847890200276-0.459837087125828	chr15	64222400	64222994	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-8216	NM_010026	13196	Mm.277236	NM_010026	ENSMUSG00000022377	Asap1	AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19	ArfGAP with SH3 domain, ankyrin repeat and PH domain1	protein-coding
common_peak1-18240-28-27-0.245604197763859-0.431536360747188	chr8	31168103	31169205	+	0	NA	Intergenic	Intergenic	-510213	NR_045856	71314	Mm.158666	NR_045856	ENSMUSG00000097044	4933433F19Rik	-	RIKEN cDNA 4933433F19 gene	ncRNA
common_peak2-24322-44-43-0.362461215931238-0.728039925316326	chr17	70745662	70747085	+	0	NA	Intergenic	Intergenic	-27759	NM_177639	224997	Mm.311840	NM_027712	ENSMUSG00000003279	Dlgap1	4933422O14Rik|9630002F18|AI845682|AI848168|BB075781|D17Bwg0511e|GKAP/SAPAP|GKPA/SAPAP|Gkap|Sapap1|mKIAA4162	discs, large (Drosophila) homolog-associated protein 1	protein-coding
common_peak2-21907-39-49--0.0280949428555708-0.301029995663988	chr12	8810854	8811876	+	0	NA	Intergenic	B1_Mur4|SINE|Alu	33163	NM_011519	20969	Mm.2580	NM_011519	ENSMUSG00000020592	Sdc1	AA408134|AA409076|CD138|Sstn|Synd|Synd1|syn-1	syndecan 1	protein-coding
common_peak1-14631-54-69-0.0438027446847675-0.314891503798722	chr3	55111847	55113101	+	0	NA	intron (NM_001111053, intron 3 of 6)	intron (NM_001111053, intron 3 of 6)	66026	NM_001195538	13175	Mm.393242	NM_019978	ENSMUSG00000027797	Dclk1	1700113D08Rik|2810480F11Rik|AI836758|Click-I|Cpg16|Dcamkl1|Dcl|Dclk|mKIAA0369	doublecortin-like kinase 1	protein-coding
unique_peak1-32-13-8-0.608547029195456-0.660903317613904	chr1	13268296	13268996	+	0	NA	intron (NM_001077695, intron 2 of 21)	intron (NM_001077695, intron 2 of 21)	95518	NM_001077695	17978	Mm.2537	NM_008678	ENSMUSG00000005886	Ncoa2	9530095N19|D1Ertd433e|GRIP-1|Grip1|KAT13C|SRC-2|TIF-2|TIF2|bHLHe75	nuclear receptor coactivator 2	protein-coding
unique_peak2-33660-1-6--2.43441193227435-1.56314192529759	chr11	100165330	100165671	+	0	NA	Intergenic	MTB_Mm|LTR|MaLR	-15810	NM_011508	20918	Mm.13886	NM_011508	ENSMUSG00000035530	Eif1	Sui1-rs1	eukaryotic translation initiation factor 1	protein-coding
common_peak2-29946-14-5-1.31425365963649-1.4372489031793	chr6	116643793	116644226	+	0	NA	3' UTR (NM_178768, exon 5 of 5)	3' UTR (NM_178768, exon 5 of 5)	-20155	NM_178045	213391	Mm.257931	NM_178045	ENSMUSG00000042129	Rassf4	3830411C14Rik|AD037|AI586137	Ras association (RalGDS/AF-6) domain family member 4	protein-coding
unique_peak1-277-10-1-2.35641534500877-2.57096726280955	chr1	100180046	100180358	+	0	NA	Intergenic	L1Md_A|LINE|L1	-137499	NM_001164233	70866	Mm.389164	NM_027584	ENSMUSG00000026336	Slco6d1	4921511I05Rik	solute carrier organic anion transporter family, member 6d1	protein-coding
common_peak1-19371-10-14--0.550475250599749-0.446472590016315	chrX	20662850	20663336	+	0	NA	intron (NM_183185, intron 2 of 4)	intron (NM_183185, intron 2 of 4)	3262	NM_183185	245368	Mm.220470	NM_183185	ENSMUSG00000031079	Zfp300	D930016N04Rik	zinc finger protein 300	protein-coding
common_peak1-17257-14-10-0.439784541720347-0.519648556297791	chr6	134262739	134263333	+	0	NA	Intergenic	Intergenic	-83311	NM_025778	66813	Mm.474472	NM_025778	ENSMUSG00000030200	Bcl2l14	4930452K23Rik|4933405K19Rik|9030625M01Rik|AI429211|Bclg	BCL2-like 14 (apoptosis facilitator)	protein-coding
unique_peak1-5086-9-2-1.60465090568306-1.87199725847353	chr4	144974241	144974809	+	0	NA	Intergenic	Intergenic	-69475	NM_009401	21941	Mm.12810	NM_009401	ENSMUSG00000028602	Tnfrsf8	Cd30|D1S166E|Ki|Ki-1	tumor necrosis factor receptor superfamily, member 8	protein-coding
unique_peak1-5667-13-2-2.19350952991661-3.03832868024006	chr6	31077717	31078276	+	0	NA	intron (NR_110471, intron 3 of 3)	intron (NR_110471, intron 3 of 3)	-64903	NR_029532	387223		NR_029532	miRBase:MI0000143	Mir29b-1	Mirn29b|Mirn29b-1	microRNA 29b-1	ncRNA
common_peak2-25299-47-57-0.0768604296389759-0.330479330879733	chr18	70643865	70645095	+	0	NA	intron (NM_001289649, intron 6 of 8)	U6|snRNA|snRNA	12160	NM_001289650	170461	Mm.83623	NM_029019	ENSMUSG00000079608	Stard6	1700011K09Rik|4833424I06Rik|4933429L05Rik|AI644424	StAR-related lipid transfer (START) domain containing 6	protein-coding
unique_peak2-33722-6-5--0.0195643903408542-0.947717972411649	chr11	113778213	113778604	+	0	NA	intron (NM_172800, intron 2 of 44)	IAPEz-int|LTR|ERVK	148857	NM_172800	237979	Mm.130504	NM_172800	ENSMUSG00000041592	Sdk2	4632412F08Rik|5330435L01Rik|Sdk-2|mKIAA1514	sidekick homolog 2 (chicken)	protein-coding
unique_peak2-37803-6-30--2.38879820000657-4.0937649558367	chr5	123344154	123345247	+	0	NA	intron (NM_001003953, intron 12 of 22)	MIR|SINE|MIR	5659	NM_013910	30841	Mm.86406	NM_013910	ENSMUSG00000029475	Kdm2b	Cxxc2|E430001G17|Fbl10|Fbxl10|Jhdm1b|PCCX2|mKIAA3014	lysine (K)-specific demethylase 2B	protein-coding
unique_peak1-346-10-6-0.549060422951165-1.21398586181642	chr1	135347469	135347974	+	0	NA	Intergenic	Intergenic	-26932	NM_011439	20668	Mm.8575	NM_011439	ENSMUSG00000070643	Sox13	AA407916|AW259412|AW540933|Sox-13	SRY (sex determining region Y)-box 13	protein-coding
unique_peak1-5385-8-4-0.683294323060208-1.21878474469819	chr5	100603294	100603745	+	0	NA	Intergenic	Intergenic	-14692	NM_182841	231503	Mm.99790	NM_182841	ENSMUSG00000050640	Tmem150c	-	transmembrane protein 150C	protein-coding
common_peak2-30985-12-14--0.25811461052088-0.309074325783021	chr8	3499880	3500568	+	0	NA	promoter-TSS (NM_053177)	promoter-TSS (NM_053177)	-295	NM_053177	94178	Mm.8356	NM_053177	ENSMUSG00000004567	Mcoln1	2210015I05Rik|TRPML1|mucolipidin	mucolipin 1	protein-coding
common_peak1-13442-94-115-0.271608572721744-0.834109514939331	chr19	55742208	55744909	+	0	NA	intron (NR_045318, intron 2 of 3)	intron (NR_045318, intron 2 of 3)	33136	NR_045318	77594	Mm.329924	NR_045318	ENSMUSG00000097632	4930552P12Rik	-	RIKEN cDNA 4930552P12 gene	ncRNA
unique_peak1-4021-9-4-0.867685311516858-1.36011389749466	chr2	38961779	38962272	+	0	NA	intron (NM_178778, intron 9 of 17)	intron (NM_178778, intron 9 of 17)	-40964	NM_029793	76899	Mm.131098	NM_029793	ENSMUSG00000026754	Golga1	0710001G09Rik|2210418B03Rik|AW107649|Golgi97|golgin-97	golgi autoantigen, golgin subfamily a, 1	protein-coding
unique_peak1-4781-9-4-0.867685311516858-1.36011389749466	chr3	129314128	129314680	+	0	NA	intron (NM_130450, intron 3 of 4)	intron (NM_130450, intron 3 of 4)	79100	NM_130450	170439	Mm.314113	NM_130450	ENSMUSG00000041220	Elovl6	C77826|FAE|LCE	ELOVL family member 6, elongation of long chain fatty acids (yeast)	protein-coding
common_peak2-28847-10-14--0.550475250599749-0.446472590016315	chr5	72649167	72649666	+	0	NA	intron (NR_003966, intron 10 of 22)	L2c|LINE|L2	54834	NM_153389	231287	Mm.32775	NM_153389	ENSMUSG00000046808	Atp10d	9830145H18Rik|ATPVD|D5Buc24e	ATPase, class V, type 10D	protein-coding
unique_peak2-37899-5-6--0.511735258063458-0.947717972411649	chr5	142426167	142426577	+	0	NA	intron (NM_177879, intron 8 of 44)	intron (NM_177879, intron 8 of 44)	-451079	NM_199068	17425	Mm.24214	NM_010812	ENSMUSG00000056493	Foxk1	A630048H08Rik|AI463295|ENSMUSG00000075577|Gm10868|Mnf	forkhead box K1	protein-coding
unique_peak2-34971-8-10--0.454209200689727-1.078512453669	chr15	98180733	98181431	+	0	NA	Intergenic	Intergenic	-9712	NM_146281	258278	Mm.377409	NM_146281	ENSMUSG00000051793	Olfr284	MOR160-4	olfactory receptor 284	protein-coding
common_peak2-32168-22-17-0.477359103645092-0.633951497070961	chr9	110683050	110683862	+	0	NA	Intergenic	Intergenic	-17233	NM_153099	235628	Mm.292285	NM_153099	ENSMUSG00000044664	Prss42	Tessp2	protease, serine 42	protein-coding
unique_peak1-3646-29-10-1.65285846197781-3.49519823291232	chr19	38591503	38592569	+	0	NA	Intergenic	Intergenic	-6651	NM_019588	74055	Mm.34031	NM_019588	ENSMUSG00000024998	Plce1	4933403A21Rik|PLCepsilon|Plce|mKIAA1516	phospholipase C, epsilon 1	protein-coding
unique_peak2-38335-1-5--2.2120195109379-1.32905871926422	chr7	16285593	16285961	+	0	NA	Intergenic	MuRRS4-int|LTR|ERV1	-49942	NM_145709	252829	Mm.222738	NM_145709		Obox5	C87544	oocyte specific homeobox 5	protein-coding
unique_peak1-3385-10-3-1.35641534500877-1.75805390616669	chr19	3925745	3926212	+	0	NA	intron (NM_026316, intron 1 of 9)	B4A|SINE|B4	3738	NM_026316	67689	Mm.109341	NM_026316	ENSMUSG00000024885	Aldh3b1	1700001N19Rik|ALDH4|ALDH7	aldehyde dehydrogenase 3 family, member B1	protein-coding
unique_peak1-4246-13-4-1.45654393575041-2.23384849113406	chr2	127143141	127143778	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-18436	NM_010090	13537	Mm.4729	NM_010090	ENSMUSG00000027368	Dusp2	PAC1	dual specificity phosphatase 2	protein-coding
unique_peak2-33181-7-20--1.59322659248057-1.71830443967823	chr10	95940595	95941361	+	0	NA	Intergenic	MLT1F1|LTR|MaLR	-138657	NM_007569	12226	Mm.23811	NM_007569	ENSMUSG00000036478	Btg1	AI426953|AW546738	B cell translocation gene 1, anti-proliferative	protein-coding
common_peak1-10773-17-13-0.410941416147434-0.546772548767014	chr14	73234237	73235010	+	0	NA	Intergenic	Intergenic	-124813	NM_207636	319448	Mm.205421	NM_207636	ENSMUSG00000033487	Fndc3a	1700094E19Rik|D14Ertd453e|F730017H24Rik|Fndc3|sys	fibronectin type III domain containing 3A	protein-coding
common_peak2-30622-19-18-0.154759813218101-0.351190433797598	chr7	92560866	92561584	+	0	NA	intron (NM_001105182, intron 1 of 5)	intron (NM_001105182, intron 1 of 5)	2961	NM_001105182	330581	Mm.469909	NM_001105182	ENSMUSG00000091006	Vmn2r69	-	vomeronasal 2, receptor 69	protein-coding
unique_peak2-38079-2-8--2.08737925770563-1.65811743852845	chr6	50685542	50685960	+	0	NA	Intergenic	Intergenic	-40363	NR_045984	319981	Mm.131454	NR_045984		C530044C16Rik	-	RIKEN cDNA C530044C16 gene	ncRNA
common_peak2-21548-11-8-0.338768582809301-1.14218153353838	chr11	96017790	96018238	+	0	NA	exon (NM_172799, exon 13 of 15)	exon (NM_172799, exon 13 of 15)	22914	NM_172799	237930	Mm.249912	NM_172799	ENSMUSG00000038756	Ttll6	4932418K24Rik|D11Moh43e|D11Moh44e|t8130b59	tubulin tyrosine ligase-like family, member 6	protein-coding
common_peak2-22883-17-17-0.0483713367627256-0.325169893479371	chr14	31435352	31436106	+	0	NA	intron (NM_011103, intron 1 of 17)	intron (NM_011103, intron 1 of 17)	3665	NM_011103	18753	Mm.2314	NM_011103	ENSMUSG00000021948	Prkcd	AI385711|D14Ertd420e|PKC[d]|PKCdelta|Pkcd	protein kinase C, delta	protein-coding
unique_peak1-4864-14-5-1.31425365963649-1.4372489031793	chr4	5793571	5794382	+	0	NA	Intergenic	L1Md_F2|LINE|L1	222650	NM_173426	242297	Mm.331470	NM_173426	ENSMUSG00000049119	Fam110b	1700012H17Rik|5031405P22|AW049855	family with sequence similarity 110, member B	protein-coding
common_peak2-21926-13-8-0.608547029195456-0.660903317613904	chr12	17739377	17739785	+	0	NA	intron (NM_016677, intron 1 of 3)	intron (NM_016677, intron 1 of 3)	41961	NM_016677	53602	Mm.313619	NM_016677	ENSMUSG00000071379	Hpcal1	NVP-3|Nvp3|VILIP3|Vnsl3|Vsnl3	hippocalcin-like 1	protein-coding
common_peak1-12605-10-8-0.186490343566457-1.078512453669	chr18	25644394	25645043	+	0	NA	intron (NM_001146294, intron 12 of 12)	intron (NM_001146294, intron 12 of 12)	267766	NM_133195	108013	Mm.266435	NM_133195	ENSMUSG00000024268	Celf4	A230070D14Rik|BRUNOL-4|Brul4|Brunol4|C130060B05Rik	CUGBP, Elav-like family member 4	protein-coding
unique_peak1-6440-13-2-2.19350952991661-3.03832868024006	chr7	98902748	98903491	+	0	NA	intron (NM_011807, intron 3 of 22)	intron (NM_011807, intron 3 of 22)	-307785	NM_001243046	23859	Mm.147213	NM_011807		Dlg2	A330103J02Rik|B230218P12Rik|B330007M19Rik|Dlgh2|Gm1197|PSD93	discs, large homolog 2 (Drosophila)	protein-coding
common_peak2-23847-13-6-0.971117108580164-1.01572999746118	chr15	102026246	102026588	+	0	NA	Intergenic	Intergenic	-6943	NM_144942	246277	Mm.296382	NM_144942	ENSMUSG00000023044	Csad	Csd	cysteine sulfinic acid decarboxylase	protein-coding
unique_peak1-6598-7-4-0.477162735410827-1.09384600808989	chr7	145114449	145114851	+	0	NA	Intergenic	Intergenic	474763	NM_183289	70571	Mm.334297	NM_183289	ENSMUSG00000091002	Tcerg1l	5730476P14Rik	transcription elongation regulator 1-like	protein-coding
common_peak1-10983-26-12-1.22745937401737-2.03163221100073	chr15	34220883	34222202	+	0	NA	Intergenic	RMER17C|LTR|ERVK	-14894	NM_016762	17181	Mm.396856	NM_016762	ENSMUSG00000022324	Matn2	Crtm2|matrilin-2	matrilin 2	protein-coding
unique_peak2-33345-2-7--1.91745425626332-1.45399745587252	chr11	23729682	23730002	+	0	NA	Intergenic	L1_Mus3|LINE|L1	-58872	NM_009044	19696	Mm.4869	NM_009044	ENSMUSG00000020275	Rel	c-Rel	reticuloendotheliosis oncogene	protein-coding
unique_peak1-2548-9-0-3.18961340640422-3.01029995663981	chr16	23464182	23464602	+	0	NA	intron (NM_008555, intron 11 of 15)	intron (NM_008555, intron 11 of 15)	35186	NM_001004151	239766	Mm.208751	NM_001004151	ENSMUSG00000033383	Rtp1	Gm1766|Gm604	receptor transporter protein 1	protein-coding
common_peak1-18920-20-8-1.31814978314888-1.77631109801764	chr9	44407614	44408369	+	0	NA	Intergenic	Intergenic	-4984	NM_001110826	13209	Mm.267061	NM_007841	ENSMUSG00000032097	Ddx6	1110001P04Rik|E230023J21Rik|HLR2|mRCK/P54|p54|rck	DEAD (Asp-Glu-Ala-Asp) box polypeptide 6	protein-coding
common_peak1-14195-55-21-1.7451882525154-7.10488953080622	chr2	148029549	148031509	+	0	NA	Intergenic	Intergenic	-157824	NM_010446	15376	Mm.938	NM_010446	ENSMUSG00000037025	Foxa2	HNF3-beta|HNF3beta|Hnf-3b|Hnf3b|Tcf-3b|Tcf3b	forkhead box A2	protein-coding
unique_peak2-35955-1-5--2.2120195109379-1.32905871926422	chr19	11970596	11970961	+	0	NA	exon (NM_146410, exon 1 of 1)	exon (NM_146410, exon 1 of 1)	265	NM_146410	258405	Mm.358933	NM_146410	ENSMUSG00000060878	Olfr1420	MOR266-4	olfactory receptor 1420	protein-coding
common_peak2-30780-9-8-0.0196884049619079-1.03275496310833	chr7	126624762	126625357	+	0	NA	Intergenic	Intergenic	-2283	NM_001278605	22242	Mm.10826	NM_009470	ENSMUSG00000030963	Umod	THP|Urehd1|urehr4	uromodulin	protein-coding
unique_peak2-35817-5-5--0.289342836727009-0.909929411522249	chr18	64076521	64076897	+	0	NA	intron (NM_001014981, intron 22 of 27)	L1Md_T|LINE|L1	208360	NM_001014981	104082	Mm.30850	NM_001014981	ENSMUSG00000040560	Wdr7	AI462727|TRAG|mKIAA0541	WD repeat domain 7	protein-coding
unique_peak1-1785-14-4-1.57728806547028-2.4322161449009	chr14	8326774	8327425	+	0	NA	Intergenic	Intergenic	73981	NM_001270842	100041874	Mm.350858	NM_001270842	ENSMUSG00000079364	Gm3558	ENSMUSG00000079364	predicted gene 3558	protein-coding
common_peak1-13414-22-17-0.477359103645092-0.633951497070961	chr19	53311394	53312347	+	0	NA	intron (NM_001164101, intron 10 of 13)	intron (NM_001164101, intron 10 of 13)	17825	NR_036590	69319	Mm.57452	NR_036590		1700001K23Rik	-	RIKEN cDNA 1700001K23 gene	ncRNA
common_peak2-26248-5-19--2.02630843089322-2.19184853030482	chr2	29827392	29828063	+	0	NA	intron (NM_001177668, intron 1 of 55)	intron (NM_001177668, intron 1 of 55)	6647	NM_001076554	20740	Mm.204969	NM_001076554	ENSMUSG00000057738	Sptan1	2610027H02Rik|Spna-2|Spna2	spectrin alpha, non-erythrocytic 1	protein-coding
common_peak2-28064-40-23-1.07401318202994-2.65992162410571	chr4	62965213	62966095	+	0	NA	intron (NM_025685, intron 34 of 60)	(ATGGTG)n|Simple_repeat|Simple_repeat	-39946	NM_008768	18405	Mm.4777	NM_008768	ENSMUSG00000039196	Orm1	Agp-1|Agp-2|Orm-1	orosomucoid 1	protein-coding
common_peak1-14319-9-26--1.56527409575925-2.17218792383888	chr2	163553044	163553531	+	0	NA	3' UTR (NM_007398, exon 11 of 12)	3' UTR (NM_007398, exon 11 of 12)	22688	NM_007398	11486	Mm.388	NM_007398	ENSMUSG00000017697	Ada	-	adenosine deaminase	protein-coding
common_peak1-14981-19-61--1.55150898372519-4.72447886971477	chr3	107631001	107631998	+	0	NA	Intergenic	Intergenic	-48649	NM_133867	99662	Mm.108491	NM_133867	ENSMUSG00000040600	Eps8l3	AI504489|Eps8r3	EPS8-like 3	protein-coding
common_peak2-28107-13-8-0.608547029195456-0.660903317613904	chr4	88948003	88948440	+	0	NA	Intergenic	Lx7|LINE|L1	-7698	NM_009877	12578	Mm.4733	NM_009877	ENSMUSG00000044303	Cdkn2a	ARF-INK4a|Arf|INK4a-ARF|Ink4a/Arf|MTS1|Pctr1|p16|p16(INK4a)|p16INK4a|p19<ARF>|p19ARF	cyclin-dependent kinase inhibitor 2A	protein-coding
unique_peak2-36382-7-7--0.200909169701811-0.97990265578305	chr2	119552742	119553218	+	0	NA	intron (NM_030112, intron 11 of 17)	intron (NM_030112, intron 11 of 17)	-15093	NM_146125	228550	Mm.65337	NM_146125	ENSMUSG00000027296	Itpka	-	inositol 1,4,5-trisphosphate 3-kinase A	protein-coding
common_peak1-9316-17-12-0.517856620063946-0.647240723060192	chr11	94370272	94370927	+	0	NA	exon (NM_170671, exon 10 of 19)	exon (NM_170671, exon 10 of 19)	-9311	NM_027984	71889	Mm.248620	NM_027984	ENSMUSG00000010080	Epn3	2310022G12Rik	epsin 3	protein-coding
common_peak2-28889-35-16-1.34390741721217-3.08659436536937	chr5	88720961	88721645	+	0	NA	Intergenic	ETnERV2-int|LTR|ERVK	23359	NM_001110779	665615	Mm.366701	NM_001110779	ENSMUSG00000090302	Gm7714	EG665615	predicted gene 7714	protein-coding
unique_peak2-38519-4-7--1.02346051385325-1.09384600808989	chr7	45556954	45557444	+	0	NA	Intergenic	Intergenic	962705	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak1-10779-22-11-1.06232160436625-1.51503956548638	chr14	73401547	73402480	+	0	NA	Intergenic	L1MC1|LINE|L1	-23397	NR_027860	668489	Mm.158324	NR_027860		Gm9199	EG668489	glycine cleavage system protein H (aminomethyl carrier) pseudogene	pseudo
unique_peak2-39800-5-9--1.02630843089322-1.21398586181642	chrX	20616958	20617481	+	0	NA	intron (NM_001013387, intron 2 of 4)	Lx5|LINE|L1	21945	NM_001013387	319535	Mm.170163	NM_001013387		Zfp182	6330583I20Rik|Znf182	zinc finger protein 182	protein-coding
common_peak2-24434-7-11--0.785871670422967-1.21681515183528	chr17	21476331	21476859	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	25614	NM_134200	171234	Mm.405416	NM_134200	ENSMUSG00000058030	Vmn1r237	V1rf3|Vfrf3	vomeronasal 1 receptor 237	protein-coding
common_peak2-27030-22-34--0.481998911857562-0.600314449189972	chr2	174472297	174472970	+	0	NA	exon (NM_001099328, exon 1 of 5)	exon (NM_001099328, exon 1 of 5)	3598	NM_001099328	100043757	Mm.48711	NM_001099328	ENSMUSG00000050600	Zfp831	ENSMUSG00000050600|OTTMUSG00000017459	zinc finger protein 831	protein-coding
unique_peak1-5210-8-0-3.00522241794757-2.70926996097583	chr5	36062766	36063280	+	0	NA	intron (NM_194344, intron 3 of 17)	intron (NM_194344, intron 3 of 17)	8902	NM_194344	231147	Mm.290429	NM_194344	ENSMUSG00000036553	Sh3tc1	4631428G15|BC024909	SH3 domain and tetratricopeptide repeats 1	protein-coding
common_peak2-21025-27-34--0.137737066049731-0.314192449397093	chr11	31869939	31870802	+	0	NA	intron (NM_026262, intron 1 of 4)	intron (NM_026262, intron 1 of 4)	4737	NM_026262	67592	Mm.78654	NM_026262	ENSMUSG00000020299	4930524B15Rik	-	RIKEN cDNA 4930524B15 gene	protein-coding
common_peak2-31216-9-13--0.617741515653384-0.459837087125828	chr8	68734793	68735355	+	0	NA	intron (NM_001293784, intron 4 of 8)	Lx|LINE|L1	-175126	NM_001166375	72925	Mm.380457	NM_175188	ENSMUSG00000036469	March1	2900024D24Rik|BB085186	membrane-associated ring finger (C3HC4) 1	protein-coding
common_peak2-21121-4-4--0.345388608740609-0.864171920961574	chr11	53567411	53567743	+	0	NA	Intergenic	URR1A|DNA|MER1_type	9579	NR_106131	102465772		NR_106131	miRBase:MI0025011	Mir7671	mmu-mir-7671	microRNA mir-7671	ncRNA
unique_peak1-4579-22-13-0.8399291830298-1.1381569562463	chr3	57340961	57341789	+	0	NA	intron (NM_133784, intron 2 of 6)	B3A|SINE|B2	38423	NM_133784	97064	Mm.405029	NM_133784	ENSMUSG00000027803	Wwtr1	2310058J06Rik|2610021I22Rik|C78399|Taz	WW domain containing transcription regulator 1	protein-coding
common_peak1-7728-29-21-0.652858461977813-1.06916698217164	chr1	88463680	88465002	+	0	NA	intron (NM_008801, intron 1 of 4)	intron (NM_008801, intron 1 of 4)	14735	NM_008801	18582	Mm.12925	NM_008801	ENSMUSG00000026239	Pde6d	AI841218|PrBP/delta	phosphodiesterase 6D, cGMP-specific, rod, delta	protein-coding
common_peak2-25722-19-37--0.845240186781899-1.27201509741564	chr19	23273184	23273996	+	0	NA	Intergenic	Intergenic	49669	NR_035423	100316672		NR_035423		Mir1192	Mirn1192|mmu-mir-1192	microRNA 1192	ncRNA
common_peak1-13764-21-25--0.130950452874856-0.305461879681376	chr2	34957823	34958643	+	0	NA	Intergenic	Intergenic	-2028	NM_001243103	98870	Mm.415380	NM_178885	ENSMUSG00000035875	AI182371	AI046667	expressed sequence AI182371	protein-coding
common_peak1-16488-8-10--0.454209200689727-1.078512453669	chr5	138186658	138187119	+	0	NA	promoter-TSS (NM_023910)	promoter-TSS (NM_023910)	-309	NM_029805	78829	Mm.286399	NM_023910	ENSMUSG00000029723	Tsc22d4	0610009M14Rik|1700023B23Rik|AI415410|Thg-1pit|Tilz2	TSC22 domain family, member 4	protein-coding
common_peak2-21564-13-8-0.608547029195456-0.660903317613904	chr11	97322010	97322510	+	0	NA	intron (NM_021493, intron 6 of 18)	intron (NM_021493, intron 6 of 18)	10786	NM_021493	58996	Mm.394118	NM_021493	ENSMUSG00000049807	Arhgap23	A330041B18Rik	Rho GTPase activating protein 23	protein-coding
common_peak2-25444-20-25--0.212364933549899-0.342639663781856	chr19	4096809	4097341	+	0	NA	promoter-TSS (NM_026373)	promoter-TSS (NM_026373)	-276	NM_026373	52004	Mm.29609	NM_026373	ENSMUSG00000024856	Cdk2ap2	5830466O21Rik|D19Ertd144e|Doc-1r	CDK2-associated protein 2	protein-coding
common_peak2-19863-17-26--0.53659116395843-0.538442145997695	chr1	92473272	92473829	+	0	NA	Intergenic	Intergenic	-26450	NM_133805	108679	Mm.119177	NM_133805	ENSMUSG00000034432	Cops8	9430009J09Rik|AA408242|Csn8|Sgn8	COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana)	protein-coding
unique_peak2-32569-7-12--0.901348887842903-1.31827279259406	chr1	85810115	85810684	+	0	NA	Intergenic	Intergenic	-543258	NM_001037909	620078	Mm.386456	NM_175219	ENSMUSG00000052477	C130026I21Rik	4930565N07Rik|OTTMUSG00000029174	RIKEN cDNA C130026I21 gene	protein-coding
common_peak2-21768-15-24--0.631691439219068-0.650819692678081	chr11	116580740	116581549	+	0	NA	Intergenic	Intergenic	-25170	NM_009180	20446	Mm.3947	NM_009180		St6galnac2	II|ST6GalNAc|Siat7|Siat7b	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2	protein-coding
common_peak2-22719-29-19-0.790361985727748-1.34608670144205	chr13	104023575	104024343	+	0	NA	intron (NM_175171, intron 1 of 28)	Charlie1a|DNA|MER1_type	100613	NM_175171	328329	Mm.202606	NM_175171	ENSMUSG00000034751	Mast4	4930420O11Rik|AI642422|mKIAA0303	microtubule associated serine/threonine kinase family member 4	protein-coding
common_peak2-23138-101-172--0.180613990900305-0.542368051514677	chr14	103098499	103100246	+	0	NA	Intergenic	Intergenic	282477	NR_039592	100628599		NR_039592	miRBase:MI0018042	Mir5130	mmu-mir-5130|mu-mir-5130	microRNA 5130	ncRNA
common_peak2-28553-5-8--0.874305337448166-1.10484139239135	chr5	4222607	4223066	+	0	NA	Intergenic	Intergenic	30469	NM_001042670	208595	Mm.129815	NM_001042670	ENSMUSG00000053178	Mterf1b	ENSMUSG00000053178|Gm9897	mitochondrial transcription termination factor 1b	protein-coding
common_peak2-31853-25-34--0.26743311159986-0.387290225425543	chr9	48410599	48411261	+	0	NA	intron (NM_010924, intron 2 of 2)	L1M2|LINE|L1	2252	NM_010924	18113	Mm.8362	NM_010924	ENSMUSG00000032271	Nnmt	-	nicotinamide N-methyltransferase	protein-coding
unique_peak1-1733-8-1-2.00522241794757-2.05605744720049	chr13	100533877	100534368	+	0	NA	Intergenic	Intergenic	136516	NM_013732	27220	Mm.75498	NM_013732	ENSMUSG00000021647	Cartpt	Cart	CART prepropeptide	protein-coding
unique_peak1-4532-13-4-1.45654393575041-2.23384849113406	chr3	33621578	33621986	+	0	NA	Intergenic	Lx7|LINE|L1	-77323	NM_027619	67120	Mm.275710	NM_025978	ENSMUSG00000027677	Ttc14	2700016E08Rik|4930434D01Rik|4931403I22Rik|4933402I15Rik|AI662468|AU014779|AW561908|cI-44|mKIAA1980	tetratricopeptide repeat domain 14	protein-coding
common_peak1-15790-13-18--0.469455482805817-0.409888142029227	chr4	155624672	155625271	+	0	NA	Intergenic	Intergenic	-16005	NM_198305	231003	Mm.423038	NM_198305	ENSMUSG00000078484	Klhl17	AL022703|BC058738	kelch-like 17	protein-coding
common_peak2-22361-6-6--0.241956811677302-0.947717972411649	chr13	28417748	28418157	+	0	NA	Intergenic	Lx6|LINE|L1	183599	NM_023746	28078	Mm.155058	NM_023746	ENSMUSG00000017064	Prl5a1	1600013P04Rik|D13Wsu14e|PLP-L|Prlpl	prolactin family 5, subfamily a, member 1	protein-coding
unique_peak2-34163-5-5--0.289342836727009-0.909929411522249	chr13	30365463	30365789	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-62599	NM_177322	11607	Mm.35062	NM_177322	ENSMUSG00000049115	Agtr1a	1810074K20Rik|AG2S|AI551199|AT1|AT1a|AT2R1|AT2R1A|Agtr-1a|Agtr1|Angtr-1a	angiotensin II receptor, type 1a	protein-coding
unique_peak1-218-17-3-2.21829633820504-3.11807310444576	chr1	88279212	88280022	+	0	NA	Intergenic	MTEb|LTR|MaLR	5099	NM_010341	14767	Mm.389159	NM_010341	ENSMUSG00000026237	Nmur1	FM-3|Gpr66|NMU-R1|NMU1R|NmU-R	neuromedin U receptor 1	protein-coding
common_peak1-10386-20-30--0.466121525795682-0.569352520859861	chr13	95374752	95375540	+	0	NA	Intergenic	Intergenic	-183752	NM_009321	21371	Mm.379025	NM_009321	ENSMUSG00000042043	Tbca	Tbca13	tubulin cofactor A	protein-coding
common_peak1-11762-51-49-0.431067635827849-0.910002444715788	chr16	38549628	38550780	+	0	NA	exon (NM_172380, exon 1 of 11)	exon (NM_172380, exon 1 of 11)	134	NM_172380	224143	Mm.284366	NM_172380	ENSMUSG00000034064	Poglut1	9630046K23Rik|Clp46|Ktelc1|Rumi	protein O-glucosyltransferase 1	protein-coding
common_peak1-10016-8-14--0.901668177660948-0.660903317613906	chr13	6606521	6607041	+	0	NA	intron (NM_001291071, intron 8 of 21)	intron (NM_001291071, intron 8 of 21)	41236	NM_019703	56421	Mm.273874	NM_019703	ENSMUSG00000021196	Pfkp	1200015H23Rik|9330125N24Rik|ATP-PFK|PFK-C|PFK-P	phosphofructokinase, platelet	protein-coding
common_peak1-7545-7-6--0.00826409175941478-0.97990265578305	chr1	36546759	36547211	+	0	NA	intron (NM_033570, intron 1 of 6)	intron (NM_033570, intron 1 of 6)	18543	NM_033570	94220	Mm.422638	NM_033570	ENSMUSG00000037408	Cnnm4	5430430O18Rik|Acdp4	cyclin M4	protein-coding
common_peak2-24276-21-13-0.762134343208631-1.0220094258199	chr16	95815032	95815705	+	0	NA	Intergenic	Intergenic	-63396	NM_133659	13876	Mm.164531	NM_133659	ENSMUSG00000040732	Erg	D030036I24Rik	avian erythroblastosis virus E-26 (v-ets) oncogene related	protein-coding
unique_peak1-1509-9-0-3.18961340640422-3.01029995663981	chr13	4206531	4207050	+	0	NA	Intergenic	B4|SINE|B4	16357	NM_013778	27384	Mm.27447	NM_013778	ENSMUSG00000021213	Akr1c13	mKIAA4014	aldo-keto reductase family 1, member C13	protein-coding
unique_peak2-36898-5-9--1.02630843089322-1.21398586181642	chr3	96226889	96227320	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-8348	NR_001579	21748		NR_001579	ENSMUSG00000064796	Terc	mTER|mTR	telomerase RNA component	ncRNA
unique_peak1-4265-8-0-3.00522241794757-2.70926996097583	chr2	131746023	131746414	+	0	NA	intron (NM_001278256, intron 3 of 3)	MT2_Mm|LTR|ERVL	10554	NM_001278256	19122	Mm.648	NM_011170	ENSMUSG00000079037	Prnp	AA960666|AI325101|CD230|PrP|PrP<C>|PrPC|PrPSc|Prn-i|Prn-p|Sinc|prP27-30|prP33-35C	prion protein	protein-coding
common_peak2-30488-13-33--1.30899081061257-2.01759298435799	chr7	56050161	56050980	+	0	NA	intron (NM_028031, intron 1 of 16)	MLT1E1A|LTR|MaLR	6197	NM_028031	243983	Mm.279116	NM_028031	ENSMUSG00000030471	Zdhhc13	2410004E01Rik|C530010M18|HIP3RP|Hip14l|kojak|skc4	zinc finger, DHHC domain containing 13	protein-coding
unique_peak2-34314-3-5--0.998945590680433-0.96108193396963	chr13	95038603	95039033	+	0	NA	intron (NM_029153, intron 1 of 8)	L1MB7|LINE|L1	16418	NM_029153	107767	Mm.201455	NM_029153	ENSMUSG00000021687	Scamp1	4930505M11Rik|AI415563|AW122395	secretory carrier membrane protein 1	protein-coding
common_peak2-20248-7-11--0.785871670422967-1.21681515183528	chr1	184139880	184140284	+	0	NA	Intergenic	Intergenic	-51853	NM_001166728	625823	Mm.479992	NM_001166728		Vmn1r1	EG625823|Gm6628	vomeronasal 1 receptor 1	protein-coding
common_peak2-26944-11-9-0.186765489364251-0.344532117358383	chr2	164522138	164522670	+	0	NA	Intergenic	Intergenic	-1597	NM_030058	78239	Mm.160060	NM_030058	ENSMUSG00000017310	Spint4	9230105I15Rik	serine protease inhibitor, Kunitz type 4	protein-coding
unique_peak2-34943-1-6--2.43441193227435-1.56314192529759	chr15	89164681	89164993	+	0	NA	promoter-TSS (NM_019977)	promoter-TSS (NM_019977)	-67	NM_019977	56727	Mm.158200	NM_019977	ENSMUSG00000022613	Miox	0610009I10Rik|AI314022|Aldrl6|C85427|RSOR	myo-inositol oxygenase	protein-coding
common_peak1-8288-17-14-0.311405742596519-0.466170754204149	chr10	30600459	30601148	+	0	NA	Intergenic	L1Md_F|LINE|L1	-38214	NM_013904	15214	Mm.103573	NM_013904	ENSMUSG00000019789	Hey2	CHF1|Herp1|Hrt2|bHLHb32|hesr2	hairy/enhancer-of-split related with YRPW motif 2	protein-coding
unique_peak1-825-9-0-3.18961340640422-3.01029995663981	chr11	7804031	7804517	+	0	NA	Intergenic	Intergenic	-690348	NM_008343	16009	Mm.29254	NM_008343	ENSMUSG00000020427	Igfbp3	AI649005|IGFBP-3|IGgfbp3	insulin-like growth factor binding protein 3	protein-coding
unique_peak2-39661-2-5--1.50241675698448-1.08602067057793	chr9	107337833	107338225	+	0	NA	intron (NM_001174048, intron 2 of 37)	intron (NM_001174048, intron 2 of 37)	35818	NM_020263	56808	Mm.273084	NM_020263	ENSMUSG00000010066	Cacna2d2	Cacna2d|a2d2|du|mKIAA0558|td|torpid	calcium channel, voltage-dependent, alpha 2/delta subunit 2	protein-coding
unique_peak1-5342-11-1-2.50869358425161-2.83420869758413	chr5	91203746	91204307	+	0	NA	Intergenic	Intergenic	2565	NM_019932	56744	Mm.332490	NM_019932	ENSMUSG00000029373	Pf4	Cxcl4|Scyb4	platelet factor 4	protein-coding
common_peak1-9576-7-11--0.785871670422967-1.21681515183528	chr11	118355491	118355945	+	0	NA	intron (NM_001285438, intron 12 of 13)	intron (NM_001285438, intron 12 of 13)	17444	NM_172573	217364	Mm.473963	NM_172573	ENSMUSG00000033857	Engase	C130099A03|D230014K01Rik	endo-beta-N-acetylglucosaminidase	protein-coding
common_peak1-16391-48-43-0.511495532597517-1.12538602347823	chr5	124046374	124047876	+	0	NA	intron (NM_019765, intron 18 of 23)	intron (NM_019765, intron 18 of 23)	-24101	NM_029929	77573	Mm.41372	NM_029929	ENSMUSG00000029434	Vps33a	3830421M04Rik|AI503300|AW048546|AW554476|bf	vacuolar protein sorting 33A (yeast)	protein-coding
common_peak2-20948-13-5-1.19350952991661-1.95509489018123	chr11	12411476	12411837	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-46693	NM_001282993	12808	Mm.22847	NM_172496	ENSMUSG00000020173	Cobl	-	cordon-bleu WH2 repeat	protein-coding
unique_peak1-4573-13-3-1.77847203063777-2.58603100924543	chr3	55692784	55693341	+	0	NA	intron (NM_030595, intron 35 of 57)	intron (NM_030595, intron 35 of 57)	42035	NR_033592	71182	Mm.195603	NR_033592		4933417G07Rik	-	SEC13 homolog pseudogene	pseudo
common_peak1-13770-13-12-0.0780323124966764-0.334470287753051	chr2	35590220	35590890	+	0	NA	Intergenic	Intergenic	38303	NM_001290639	69601	Mm.29629	NM_001001602	ENSMUSG00000026883	Dab2ip	2310011D08Rik|AI480459|Aip1|mKIAA1743	disabled 2 interacting protein	protein-coding
unique_peak1-2693-9-0-3.18961340640422-3.01029995663981	chr16	78015122	78015586	+	0	NA	Intergenic	Intergenic	240345	NR_045698	100503619	Mm.387531	NR_045698		E330011O21Rik	-	RIKEN cDNA E330011O21 gene	ncRNA
common_peak2-31422-8-13--0.802132504110034-0.562038191119711	chr8	94679197	94679564	+	0	NA	Intergenic	Intergenic	200639	NR_110452	71296	Mm.86664	NR_033641	ENSMUSG00000031736	Crnde	4933436C20Rik	colorectal neoplasia differentially expressed (non-protein coding)	ncRNA
unique_peak2-39242-1-9--2.94898510510411-2.31132995230379	chr8	112005384	112005929	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-12271	NM_019938	56523	Mm.42166	NM_019938	ENSMUSG00000031727	Pmfbp1	1700016D22Rik|F77|Stap	polyamine modulated factor 1 binding protein 1	protein-coding
common_peak1-15962-14-27--0.908138761699959-1.05601013496724	chr5	31201670	31202393	+	0	NA	intron (NM_001048192, intron 12 of 16)	ID_B1|SINE|B4	8130	NM_001134692	67695	Mm.21450	NM_024460	ENSMUSG00000038803	Ost4	2310016E02Rik	oligosaccharyltransferase 4 homolog (S. cerevisiae)	protein-coding
common_peak1-14342-71-85-0.218179424017873-0.565418124657885	chr2	164745543	164746539	+	0	NA	Intergenic	Intergenic	-8791	NM_199027	329559	Mm.330776	NM_199027	ENSMUSG00000039834	Zfp335	1810045J01Rik|NIF-1|Nif1|Znf335	zinc finger protein 335	protein-coding
common_peak2-27689-1-6--2.43441193227435-1.56314192529759	chr3	121428194	121428513	+	0	NA	intron (NM_010171, intron 2 of 5)	ID_B1|SINE|B4	1898	NM_010171	14066	Mm.273188	NM_010171	ENSMUSG00000028128	F3	AA409063|CD142|Cf-3|Cf3|TF	coagulation factor III	protein-coding
unique_peak1-5404-21-4-2.24756117037887-3.74275476306371	chr5	105587047	105587930	+	0	NA	Intergenic	Intergenic	-18883	NM_001256005	17472	Mm.440525	NM_008620	ENSMUSG00000079363	Gbp4	AW228052|Mag-2|Mpa-2|Mpa2|mKIAA4245	guanylate binding protein 4	protein-coding
common_peak2-29302-10-9-0.0344872501214071-1.05503135781948	chr5	145115983	145116379	+	0	NA	intron (NM_025833, intron 1 of 13)	intron (NM_025833, intron 1 of 13)	-2611	NR_102374	100579137		NR_102372		Dmr	-	Dmrt1 related	ncRNA
common_peak1-13576-33-34-0.202054545580562-0.406785247261493	chr2	13371149	13372379	+	0	NA	intron (NM_001081084, intron 17 of 66)	intron (NM_001081084, intron 17 of 66)	41739	NM_001081084	65969	Mm.313915	NM_001081084	ENSMUSG00000026726	Cubn	AA408369|AL022750|D2Wsu88e	cubilin (intrinsic factor-cobalamin receptor)	protein-coding
common_peak1-11611-10-14--0.550475250599749-0.446472590016315	chr16	18065777	18066256	+	0	NA	promoter-TSS (NM_001289814)	promoter-TSS (NM_001289814)	-480	NR_110380	13353	Mm.27155	NM_010047	ENSMUSG00000003531	Dgcr6	-	DiGeorge syndrome critical region gene 6	protein-coding
unique_peak2-39602-3-11--1.99894559068043-1.95434855131066	chr9	78113350	78113898	+	0	NA	intron (NM_001243092, intron 4 of 6)	intron (NM_001243092, intron 4 of 6)	8688	NM_001243092	100042295	Mm.197422	NM_001243092		Gm3776	-	predicted gene 3776	protein-coding
unique_peak2-35648-7-22--1.72447112575882-2.07034318903805	chr18	56737714	56738315	+	0	NA	intron (NM_019996, intron 2 of 4)	B3|SINE|B2	-5421	NM_001127338	110695	Mm.30250	NM_138600		Aldh7a1	Atq1|D18Wsu181e	aldehyde dehydrogenase family 7, member A1	protein-coding
common_peak2-25015-24-27--0.0141450192898871-0.304978344874324	chr18	21001095	21001756	+	0	NA	intron (NM_177038, intron 18 of 28)	B2_Mm2|SINE|B2	53154	NM_177038	75964	Mm.273769	NM_029491	ENSMUSG00000033382	Trappc8	5033403J15Rik|AI845423|D030074E01Rik|Trs85|mKIAA1012	trafficking protein particle complex 8	protein-coding
common_peak1-16426-27-7-1.99154595089524-4.07016573886257	chr5	131812677	131813762	+	0	NA	Intergenic	MER5A|DNA|MER1_type	-29827	NM_145218	212996	Mm.299204	NM_145218		Wbscr17	AA388321|E330012B09Rik	Williams-Beuren syndrome chromosome region 17 homolog (human)	protein-coding
unique_peak2-39968-4-11--1.6084230145744-1.68134727924692	chrX	144102327	144102888	+	0	NA	Intergenic	Lx6|LINE|L1	-113983	NM_001081173	210297	Mm.30506	NM_001081173	ENSMUSG00000031290	Lrch2	AI316885|mKIAA1495	leucine-rich repeats and calponin homology (CH) domain containing 2	protein-coding
unique_peak2-35299-2-7--1.91745425626332-1.45399745587252	chr17	12293883	12294326	+	0	NA	Intergenic	Intergenic	-18046	NM_026644	68262	Mm.258300	NM_026644	ENSMUSG00000023827	Agpat4	1500003P24Rik	1-acylglycerol-3-phosphate O-acyltransferase 4 (lysophosphatidic acid acyltransferase, delta)	protein-coding
unique_peak1-2683-8-4-0.683294323060208-1.21878474469819	chr16	64883819	64884213	+	0	NA	Intergenic	Intergenic	32105	NM_178647	106143	Mm.10160	NM_178647	ENSMUSG00000054604	Cggbp1	AA960172|AL023996|AW045841	CGG triplet repeat binding protein 1	protein-coding
unique_peak2-35498-8-16--1.08224042330277-0.891319708951328	chr17	46327645	46328223	+	0	NA	intron (NM_030715, intron 4 of 10)	AT_rich|Low_complexity|Low_complexity	11640	NM_030715	80905	Mm.311585	NM_030715	ENSMUSG00000023953	Polh	RAD30A|XPV	polymerase (DNA directed), eta (RAD 30 related)	protein-coding
unique_peak2-33990-13-22--0.745089925419244-0.690311289528838	chr12	86831791	86832719	+	0	NA	Intergenic	Intergenic	17404	NM_010234	14281	Mm.246513	NM_010234	ENSMUSG00000021250	Fos	D12Rfj1|c-fos|cFos	FBJ osteosarcoma oncogene	protein-coding
unique_peak2-38653-1-5--2.2120195109379-1.32905871926422	chr7	95690249	95690508	+	0	NA	Intergenic	Intergenic	111595	NM_028238	72433	Mm.276669	NM_028238	ENSMUSG00000030559	Rab38	2310011F14Rik|AU043391|cht	RAB38, member RAS oncogene family	protein-coding
unique_peak1-613-14-6-1.09186123830004-1.16633110333236	chr10	22311802	22312458	+	0	NA	Intergenic	Intergenic	-52687	NM_178934	353169	Mm.473705	NM_178934	ENSMUSG00000037490	Slc2a12	GLUT-12|Glut12	solute carrier family 2 (facilitated glucose transporter), member 12	protein-coding
unique_peak2-36380-4-7--1.02346051385325-1.09384600808989	chr2	119262645	119263011	+	0	NA	intron (NM_026574, intron 14 of 35)	URR1A|DNA|MER1_type	40537	NM_026574	68142	Mm.330496	NM_026574	ENSMUSG00000034154	Ino80	2310079N15Rik|4632409L19Rik|Inoc1	INO80 homolog (S. cerevisiae)	protein-coding
common_peak1-14353-152-137-0.855092533911675-7.571214723743	chr2	165883689	165887278	+	0	NA	intron (NM_008679, intron 16 of 22)	intron (NM_008679, intron 16 of 22)	67346	NM_008679	17979	Mm.469663	NM_008679	ENSMUSG00000027678	Ncoa3	2010305B15Rik|AW321064|Actr|Aib1|KAT13B|Rac3|Src3|Tram-1|Tram1|bHLHe42|p/Cip|pCip	nuclear receptor coactivator 3	protein-coding
unique_peak2-36321-1-6--2.43441193227435-1.56314192529759	chr2	83728601	83729017	+	0	NA	Intergenic	L1Md_A|LINE|L1	52574	NM_027964	71861	Mm.116957	NM_027964	ENSMUSG00000034552	Zswim2	1700025P14Rik|4933437F18Rik|MEX	zinc finger SWIM-type containing 2	protein-coding
unique_peak1-7328-9-2-1.60465090568306-1.87199725847353	chr9	122178517	122179072	+	0	NA	intron (NM_001271873, intron 4 of 12)	intron (NM_001271873, intron 4 of 12)	4352	NR_106185	102465896		NR_106185		Mir8106	mmu-mir-8106	microRNA mir-8106	ncRNA
common_peak1-15696-51-46-0.520334973924935-1.1534274303752	chr4	139535441	139536915	+	0	NA	Intergenic	Intergenic	-12237	NM_173427	242721	Mm.60400	NM_173427	ENSMUSG00000078234	Klhdc7a	B230308G19Rik	kelch domain containing 7A	protein-coding
common_peak1-18876-7-10--0.660340788339108-1.12966497611638	chr9	24502586	24503047	+	0	NA	Intergenic	RLTR13D5|LTR|ERVK	-2079	NM_001166207	320752	Mm.46158	NM_001166207	ENSMUSG00000085576	Dpy19l2	4932443J21Rik|Gm18376	dpy-19-like 2 (C. elegans)	protein-coding
common_peak2-26255-7-9--0.522837264589173-1.05908390183068	chr2	30205416	30205819	+	0	NA	intron (NM_001289709, intron 5 of 11)	intron (NM_001289709, intron 5 of 11)	9219	NM_139302	227700	Mm.33343	NM_139302	ENSMUSG00000026860	Sh3glb2	SPAS-1	SH3-domain GRB2-like endophilin B2	protein-coding
common_peak1-9783-131-131-0.660845740376141-4.22151025516614	chr12	57537850	57540437	+	0	NA	Intergenic	Intergenic	91264	NR_045082	104798	Mm.310950	NR_045082		E030019B13Rik	AI413669	RIKEN cDNA E030019B13 gene	ncRNA
common_peak2-23365-24-41--0.599107520011044-0.83607543869935	chr15	52712194	52712907	+	0	NA	Intergenic	L1Md_A|LINE|L1	168550	NM_027212	69790	Mm.195562	NM_027212	ENSMUSG00000038622	Med30	1810038N03Rik|2510044J04Rik|TRAP25|Thrap6	mediator complex subunit 30	protein-coding
common_peak2-25730-37-56--0.306896942678923-0.514261803374139	chr19	24166419	24167700	+	0	NA	Intergenic	MT2B|LTR|ERVL	-61550	NM_001114174	381217	Mm.426078	NM_001114174	ENSMUSG00000071604	Fam189a2	AI414343|AI666772|Gm967	family with sequence similarity 189, member A2	protein-coding
unique_peak2-34398-0-6--3.64748585253182-1.56314192529759	chr14	3991362	3991643	+	0	NA	Intergenic	Intergenic	70878	NR_033388	100040852	Mm.483675	NR_033388		Gm3002	ENSMUSG00000079399	alpha-takusan pseudogene	pseudo
unique_peak1-1124-13-1-2.77847203063777-3.64038867156802	chr11	94988545	94989187	+	0	NA	Intergenic	(TTTA)n|Simple_repeat|Simple_repeat	7435	NM_010055	13393	Mm.5194	NM_010055	ENSMUSG00000001510	Dlx3	AV237891|Dlx-3	distal-less homeobox 3	protein-coding
common_peak1-16190-15-13-0.204809828498052-0.368541233333383	chr5	92283341	92283987	+	0	NA	Intergenic	B4|SINE|B4	-87338	NR_045383	73452	Mm.396233	NR_045383		1700063O14Rik	-	RIKEN cDNA 1700063O14 gene	ncRNA
common_peak1-13386-13-10-0.319040412000471-0.446472590016315	chr19	46761637	46762291	+	0	NA	Intergenic	MTE2b|LTR|MaLR	-2432	NM_025563	66439	Mm.87163	NM_025563	ENSMUSG00000062376	2010012O05Rik	4930569L17Rik|AI413851|AI467257	RIKEN cDNA 2010012O05 gene	protein-coding
common_peak1-18743-29-52--0.615630373948088-1.02702006187975	chr8	124862631	124863549	+	0	NA	Intergenic	Intergenic	21556	NM_133202	170732	Mm.154808	NM_133202	ENSMUSG00000039079	Trhr2	TRH-R2	thyrotropin releasing hormone receptor 2	protein-coding
unique_peak2-37203-0-8--4.01005593191652-2.05605744720049	chr4	63031463	63031835	+	0	NA	exon (NM_001045514, exon 21 of 22)	exon (NM_001045514, exon 21 of 22)	8166	NM_011016	18406	Mm.14173	NM_011016	ENSMUSG00000061540	Orm2	Agp1|Orm-2	orosomucoid 2	protein-coding
unique_peak2-34147-4-13--1.83081543591085-2.04196296489515	chr13	23761958	23762343	+	0	NA	Intergenic	MT2A|LTR|ERVL	13678	NM_178189	319164	Mm.261973	NM_178189	ENSMUSG00000069270	Hist1h2ac	-	histone cluster 1, H2ac	protein-coding
common_peak2-27789-14-8-0.729291158915332-0.771068449301682	chr3	138053945	138054447	+	0	NA	Intergenic	L1_Mus1|LINE|L1	17111	NR_033581	639769	Mm.484043	NR_033581	ENSMUSG00000090306	Adh6-ps1	1300002P07Rik|Adh5ps|Gm7277	alcohol dehydrogenase 6 (class V), pseudogene 1	pseudo
common_peak1-13395-46-43-0.438564324611504-0.913104017362127	chr19	47089785	47090791	+	0	NA	promoter-TSS (NM_001164363)	promoter-TSS (NM_001164363)	-609	NM_001164363	76952	Mm.40965	NM_029810	ENSMUSG00000025041	Nt5c2	2010002I23Rik|CnII|ENSMUSG00000025039|Gm9751|Gmp|Nt5b|Pnt5|cN-II	5'-nucleotidase, cytosolic II	protein-coding
unique_peak1-4621-9-0-3.18961340640422-3.01029995663981	chr3	69887516	69888083	+	0	NA	Intergenic	Intergenic	76264	NM_001018031	229389	Mm.331071	NM_001018031	ENSMUSG00000027788	Otol1	Gm414	otolin 1 homolog (zebrafish)	protein-coding
common_peak1-18587-10-9-0.0344872501214071-1.05503135781948	chr8	106308050	106308674	+	0	NA	Intergenic	Intergenic	180663	NR_045730	71058	Mm.67707	NR_045730		4933400L20Rik	-	RIKEN cDNA 4933400L20 gene	ncRNA
common_peak2-25277-19-28--0.455293668465885-0.518921928796332	chr18	68300377	68300904	+	0	NA	intron (NM_172631, intron 3 of 5)	intron (NM_172631, intron 3 of 5)	119987	NR_106078	102465702		NR_106078	miRBase:MI0023714	Mir7219	mmu-mir-7219	microRNA mir-7219	ncRNA
common_peak2-31158-40-92--0.880183128356933-2.88982511489534	chr8	44934462	44935897	+	0	NA	Intergenic	Intergenic	-150334	NM_001079931	384814	Mm.491652	NM_001079931		Gm5347	EG384814	predicted gene 5347	protein-coding
common_peak2-28142-30-40--0.187876595126211-0.346766333527252	chr4	98923378	98924312	+	0	NA	intron (NM_175029, intron 10 of 10)	intron (NM_175029, intron 10 of 10)	63007	NM_001145967	242557	Mm.241663	NM_175029	ENSMUSG00000028550	Atg4c	Apg4-C|Apg4c|Atg4cl|Autl1	autophagy related 4C, cysteine peptidase	protein-coding
common_peak1-14504-7-12--0.901348887842903-1.31827279259406	chr3	19162571	19163015	+	0	NA	intron (NM_001122759, intron 1 of 12)	intron (NM_001122759, intron 1 of 12)	2215	NM_008802	18583	Mm.355614	NM_008802	ENSMUSG00000069094	Pde7a	AU015378|AW047537	phosphodiesterase 7A	protein-coding
unique_peak2-38352-9-15--0.81038659359578-0.630231561310125	chr7	3290573	3291516	+	0	NA	intron (NM_001093765, intron 1 of 2)	intron (NM_001093765, intron 1 of 2)	487	NM_001093765	50918	Mm.29874	NM_016969	ENSMUSG00000068566	Myadm	D7Wsu62e	myeloid-associated differentiation marker	protein-coding
common_peak2-30022-75-62-0.761787068243368-2.93459514437512	chr6	125313040	125314688	+	0	NA	intron (NM_198604, intron 15 of 16)	intron (NM_198604, intron 15 of 16)	14123	NM_011609	21937	Mm.1258	NM_011609	ENSMUSG00000030341	Tnfrsf1a	CD120a|FPF|TNF-R|TNF-R-I|TNF-R1|TNF-R55|TNF-alphaR1|TNFAR|TNFR60|TNFRI|TNFRp55|TNFalpha-R1|Tnfr-2|Tnfr1|p55|p55-R	tumor necrosis factor receptor superfamily, member 1a	protein-coding
common_peak2-30663-7-11--0.785871670422967-1.21681515183528	chr7	101361596	101362032	+	0	NA	Intergenic	RMER19B|LTR|ERVK	1133425	NM_021427	58238	Mm.113787	NM_021427		Fam181b	A830059I20Rik|AB041569	family with sequence similarity 181, member B	protein-coding
unique_peak2-34526-9-22--1.33394854965279-1.52222891542741	chr14	54431678	54432898	+	0	NA	Intergenic	ORR1D-int|LTR|MaLR	146673	NM_001205242	100568452	Mm.213248	NM_001205242		A430107P09Rik	Va10	RIKEN cDNA A430107P09 gene	protein-coding
unique_peak2-38431-6-7--0.434601889619698-0.97990265578305	chr7	25718625	25718995	+	0	NA	Intergenic	Intergenic	29445	NM_001130152	16801	Mm.3181	NM_008488	ENSMUSG00000040940	Arhgef1	Lbcl2|Lsc	Rho guanine nucleotide exchange factor (GEF) 1	protein-coding
unique_peak2-36776-3-11--1.99894559068043-1.95434855131066	chr3	69253514	69254029	+	0	NA	intron (NM_178726, intron 1 of 3)	intron (NM_178726, intron 1 of 3)	132931	NM_178726	242083	Mm.40577	NM_178726		Ppm1l	3222401G13|5930404J21Rik|AI481720|AW045850|PP2C|PP2Cepsilon|Pp2ce|Ppp2ce|mKIAA4175	protein phosphatase 1 (formerly 2C)-like	protein-coding
unique_peak2-36443-7-8--0.370834171144123-1.00793137938329	chr2	133498900	133499316	+	0	NA	Intergenic	Intergenic	121213	NM_007553	12156	Mm.103205	NM_007553	ENSMUSG00000027358	Bmp2	AI467020|Bmp2a	bone morphogenetic protein 2	protein-coding
common_peak1-10550-20-36--0.721378581037757-1.04213512323541	chr14	20082742	20083621	+	0	NA	Intergenic	L1M4c|LINE|L1	338628	NM_001024706	432825	Mm.327147	NM_001024706	ENSMUSG00000095024	Gm5458	EG432825	predicted gene 5458	protein-coding
common_peak2-22206-61-106--0.358717656651806-0.910321572693006	chr12	111538104	111538870	+	0	NA	Intergenic	MTE2b|LTR|MaLR	21047	NM_172119	107585	Mm.154427	NM_172119	ENSMUSG00000075707	Dio3	-	deiodinase, iodothyronine type III	protein-coding
common_peak2-28623-22-39--0.674643989799958-0.97145127402441	chr5	25497962	25498778	+	0	NA	Intergenic	Intergenic	232526	NM_001004365	242894	Mm.150319	NM_001004365	ENSMUSG00000056367	Actr3b	9630005C02|ARP11|AW047569|Arp3b|Arp3beta	ARP3 actin-related protein 3B	protein-coding
common_peak1-15052-30-83--1.22264201328689-4.44388276880306	chr3	122618870	122620002	+	0	NA	intron (NR_046036, intron 3 of 5)	ID_B1|SINE|B4	7598	NR_046036	74057	Mm.159123	NR_046036		4933405D12Rik	-	RIKEN cDNA 4933405D12 gene	ncRNA
unique_peak2-38051-8-18--1.24270509549601-1.15812782348128	chr6	42265016	42265676	+	0	NA	TTS (NM_001286584)	TTS (NM_001286584)	9293	NM_001286584	76156	Mm.234314	NM_029528	ENSMUSG00000029861	Fam131b	6330503C03Rik|6530406I18Rik|AV277466	family with sequence similarity 131, member B	protein-coding
common_peak2-23901-7-8--0.370834171144123-1.00793137938329	chr16	4602779	4603200	+	0	NA	intron (NM_031184, intron 1 of 6)	ID_B1|SINE|B4	8276	NM_031184	83396	Mm.134072	NM_031184	ENSMUSG00000014303	Glis2	Gli5|Klf16|Nkl	GLIS family zinc finger 2	protein-coding
common_peak1-17481-101-166--0.129690055737632-0.416102246974924	chr7	24458642	24460518	+	0	NA	Intergenic	L1Md_F2|LINE|L1	16245	NM_030735	81010	Mm.379267	NM_030735	ENSMUSG00000035523	Vmn1r172	V1rd9|V3R9	vomeronasal 1 receptor 172	protein-coding
unique_peak1-1622-11-7-0.508693584251613-1.21681515183528	chr13	42351949	42352496	+	0	NA	Intergenic	Intergenic	-44417	NM_010104	13614	Mm.14543	NM_010104	ENSMUSG00000021367	Edn1	ET-1|preproET	endothelin 1	protein-coding
common_peak2-22117-3-12--2.11442280810037-2.15846853396659	chr12	83687817	83688218	+	0	NA	Intergenic	Intergenic	-30008	NM_015812	50779	Mm.153013	NM_015812	ENSMUSG00000021219	Rgs6	-	regulator of G-protein signaling 6	protein-coding
common_peak1-15350-41-21-1.24171708621136-3.2524299487632	chr4	55650961	55652321	+	0	NA	Intergenic	Intergenic	-106294	NM_010637	16600	Mm.4325	NM_010637	ENSMUSG00000003032	Klf4	EZF|Gklf|Zie	Kruppel-like factor 4 (gut)	protein-coding
common_peak1-8131-12-11-0.0638134843664826-0.337263207250336	chr1	189726983	189727455	+	0	NA	intron (NM_001243792, intron 2 of 7)	Lx8|LINE|L1	-94487	NM_011935	26381	Mm.89989	NM_011935	ENSMUSG00000026610	Esrrg	ERR3|Errg|NR3B3|mKIAA0832	estrogen-related receptor gamma	protein-coding
common_peak2-30043-19-23--0.18227517405947-0.320777457303847	chr6	126848613	126849197	+	0	NA	intron (NM_207210, intron 4 of 14)	intron (NM_207210, intron 4 of 14)	22952	NM_207210	101320	Mm.44896	NM_207210	ENSMUSG00000030345	Dyrk4	AW049118|Dyrk4a|Dyrk4b	dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 4	protein-coding
common_peak2-26206-23-37--0.526160008934505-0.720235944639228	chr2	26122257	26123200	+	0	NA	Intergenic	Intergenic	27349	NM_177841	329366	Mm.77712	NM_177841	ENSMUSG00000048038	4932418E24Rik	-	RIKEN cDNA 4932418E24 gene	protein-coding
unique_peak1-3538-8-1-2.00522241794757-2.05605744720049	chr19	21654392	21654911	+	0	NA	Intergenic	RMER1A|Other|Other	72630	NM_025423	66206	Mm.272430	NM_025423	ENSMUSG00000035171	1110059E24Rik	-	RIKEN cDNA 1110059E24 gene	protein-coding
common_peak1-11035-51-21-1.61549220696528-5.79081143524713	chr15	41692991	41694303	+	0	NA	Intergenic	L1M5|LINE|L1	7619	NM_175456	223513	Mm.148913	NM_175456	ENSMUSG00000042895	Abra	C130068O12Rik|STARS	actin-binding Rho activating protein	protein-coding
common_peak2-28311-50-68--0.0675841402992168-0.307512243540658	chr4	133129305	133131468	+	0	NA	promoter-TSS (NM_172876)	promoter-TSS (NM_172876)	-274	NM_172876	242691	Mm.40110	NM_172876	ENSMUSG00000028850	Gpatch3	D930035B09Rik|Gpatc3	G patch domain containing 3	protein-coding
unique_peak2-32726-7-7--0.200909169701811-0.97990265578305	chr1	162076454	162076837	+	0	NA	intron (NM_177839, intron 2 of 21)	intron (NM_177839, intron 2 of 21)	7061	NM_177839	329278	Mm.90140	NM_177839	ENSMUSG00000026725	Tnn	Tnw|tenascin-W	tenascin N	protein-coding
common_peak2-30717-7-10--0.660340788339108-1.12966497611638	chr7	113419749	113420032	+	0	NA	Intergenic	L1VL4|LINE|L1	48152	NR_030720	668128	Mm.484022	NR_030720		Gm8989	EG668128|Gm21911	very large inducible GTPase 1 pseudogene	pseudo
common_peak2-27947-11-11--0.0762689164695427-0.301029995663976	chr4	32656454	32657033	+	0	NA	intron (NR_026843, intron 1 of 4)	intron (NR_026843, intron 1 of 4)	1894	NR_026843	414068	Mm.389550	NR_026843	ENSMUSG00000086150	Bach2os	-	BTB and CNC homology 2, opposite strand	ncRNA
unique_peak2-36659-5-5--0.289342836727009-0.909929411522249	chr3	21938478	21938879	+	0	NA	Intergenic	RLTR17|LTR|ERVK	-36896	NM_030732	81004	Mm.202966	NM_030732	ENSMUSG00000027630	Tbl1xr1	8030499H02Rik|A630076E03Rik|AW539987|C21|C230089I12Rik|DC42|Ira1|TBLR1	transducin (beta)-like 1X-linked receptor 1	protein-coding
unique_peak1-1267-21-2-2.98452676454508-5.06563262809273	chr11	117314672	117315715	+	0	NA	Intergenic	Intergenic	121566	NM_001113488	53860	Mm.38450	NM_017380	ENSMUSG00000059248	Sept9	MSF1|Msf|PNUTL4|Sint1	septin 9	protein-coding
unique_peak1-1618-10-0-3.35641534500877-3.31132995230379	chr13	41659843	41660476	+	0	NA	Intergenic	Intergenic	-41426	NM_001163572	621976	Mm.259830	NM_001163572	ENSMUSG00000087370	Tmem170b	EG621976	transmembrane protein 170B	protein-coding
unique_peak2-39481-3-6--1.22133801201688-1.08602067057793	chr9	57938552	57938929	+	0	NA	intron (NM_001166282, intron 4 of 19)	intron (NM_001166282, intron 4 of 19)	11292	NM_029212	382077	Mm.335193	NM_029212	ENSMUSG00000037716	Ccdc33	4930535E21Rik|Gm1117|Tzip1	coiled-coil domain containing 33	protein-coding
unique_peak1-2469-17-1-3.21829633820504-4.59734841376773	chr16	52329836	52330565	+	0	NA	intron (NM_009655, intron 1 of 15)	Lx6|LINE|L1	122910	NM_009655	11658	Mm.288282	NM_009655	ENSMUSG00000022636	Alcam	AI853494|BEN|CD166|DM-GRASP|MuSC|SC1	activated leukocyte cell adhesion molecule	protein-coding
unique_peak2-37802-2-8--2.08737925770563-1.65811743852845	chr5	123227591	123228104	+	0	NA	intron (NM_001199676, intron 1 of 16)	MIRb|SINE|MIR	1572	NM_001199676	207565	Mm.289237	NM_145358	ENSMUSG00000029471	Camkk2	6330570N16Rik|AW061083|mKIAA0787	calcium/calmodulin-dependent protein kinase kinase 2, beta	protein-coding
unique_peak2-39540-2-5--1.50241675698448-1.08602067057793	chr9	67026289	67026630	+	0	NA	Intergenic	Intergenic	45091	NR_045748	100502636	Mm.412607	NR_045748		Gm19299	-	predicted gene, 19299	ncRNA
common_peak1-12375-56-61-0.281399515052368-0.614532557650135	chr17	65736623	65738561	+	0	NA	intron (NM_001289485, intron 13 of 15)	intron (NM_001289485, intron 13 of 15)	152530	NM_001008973	381107	Mm.141275	NM_001008973	ENSMUSG00000045036	Tmem232	E130009J12Rik|Gm940|Tes13-L|Tes13-S	transmembrane protein 232	protein-coding
common_peak1-16273-9-8-0.0196884049619079-1.03275496310833	chr5	108433958	108434499	+	0	NA	Intergenic	Intergenic	-18132	NM_026062	67266	Mm.277897	NM_026062	ENSMUSG00000029270	Fam69a	2900024C23Rik|AI315274	family with sequence similarity 69, member A	protein-coding
common_peak1-11406-33-35-0.161412561083217-0.373466121463208	chr15	98691537	98692984	+	0	NA	exon (NM_001033276, exon 12 of 55)	exon (NM_001033276, exon 12 of 55)	9376	NM_001033276	381022	Mm.264889	NM_001033276	ENSMUSG00000048154	Kmt2d	ALR|BC032281|BC058659|C430014K11Rik|KMT2B|Mll2|Mll4	lysine (K)-specific methyltransferase 2D	protein-coding
common_peak1-9667-14-21--0.560215458279653-0.519193887192484	chr12	3806962	3807543	+	0	NA	promoter-TSS (NM_001271753)	promoter-TSS (NM_001271753)	92	NM_001271753	13435	Mm.5001	NM_007872	ENSMUSG00000020661	Dnmt3a	MmuIIIA	DNA methyltransferase 3A	protein-coding
unique_peak2-32551-9-8-0.0196884049619079-1.03275496310833	chr1	72583553	72584148	+	0	NA	promoter-TSS (NM_001045533)	promoter-TSS (NM_001045533)	-712	NM_001045533	381270	Mm.337023	NM_001045533	ENSMUSG00000039372	March4	BC056494|mKIAA1399	membrane-associated ring finger (C3HC4) 4	protein-coding
unique_peak2-38881-8-14--0.901668177660948-0.660903317613906	chr8	3408028	3408744	+	0	NA	intron (NM_133962, intron 1 of 19)	intron (NM_133962, intron 1 of 19)	15378	NM_133962	102098	Mm.170461	NM_133962	ENSMUSG00000004568	Arhgef18	AI467246|D030053O22Rik	rho/rac guanine nucleotide exchange factor (GEF) 18	protein-coding
common_peak1-10462-25-22-0.338287949288093-0.51032171069054	chr13	109685372	109686394	+	0	NA	intron (NM_011056, intron 2 of 16)	intron (NM_011056, intron 2 of 16)	241512	NM_011056	238871	Mm.434429	NM_011056		Pde4d	9630011N22Rik|Dpde3	phosphodiesterase 4D, cAMP specific	protein-coding
unique_peak1-998-9-2-1.60465090568306-1.87199725847353	chr11	70588153	70588713	+	0	NA	Intergenic	Intergenic	10484	NM_177565	193043	Mm.40966	NM_177565	ENSMUSG00000043602	Zfp3	AI854635|B230309J24|Fnp-1|Zfp-3	zinc finger protein 3	protein-coding
common_peak2-30903-20-33--0.599388056659146-0.781990829058356	chr7	142532889	142534026	+	0	NA	Intergenic	Intergenic	-68593	NM_183193	270004	Mm.132547	NM_183193	ENSMUSG00000048377	Foxi2	B130055A05Rik	forkhead box I2	protein-coding
common_peak1-14174-15-25--0.688274967585436-0.73354163167379	chr2	143062816	143063563	+	0	NA	Intergenic	RLTR23|LTR|ERV1	158961	NM_020595	57329	Mm.157751	NM_020595	ENSMUSG00000027416	Otor	CDRAP|Fdp|MIA|MIAL	otoraplin	protein-coding
common_peak1-9087-16-30--0.835932668118813-1.0921097739129	chr11	69846600	69847338	+	0	NA	intron (NM_001109752, intron 8 of 19)	B1F1|SINE|Alu	14862	NM_007864	13385	Mm.27256	NM_007864	ENSMUSG00000020886	Dlg4	Dlgh4|PSD-95|PSD95|SAP90|SAP90A	discs, large homolog 4 (Drosophila)	protein-coding
common_peak1-11362-13-32--1.26592208872068-1.87214134458702	chr15	89765270	89765716	+	0	NA	Intergenic	Intergenic	-93202	NM_018803	54526	Mm.261601	NM_018803	ENSMUSG00000063260	Syt10	-	synaptotagmin X	protein-coding
common_peak2-24947-15-14-0.105274154947137-0.330004445983672	chr18	38338547	38339154	+	0	NA	Intergenic	Intergenic	30566	NM_029357	75599	Mm.36560	NM_029357	ENSMUSG00000051375	Pcdh1	2010005A06Rik|AI585920	protocadherin 1	protein-coding
unique_peak1-499-11-0-3.50869358425161-3.61235994796777	chr1	180288732	180289286	+	0	NA	Intergenic	Intergenic	-21094	NM_016805	51810	Mm.86589	NM_016805	ENSMUSG00000039630	Hnrnpu	AA408410|AI256620|AL024194|AL024437|AW557595|C86794|Hnrpu|SAFA|Sp120|hnRNP U	heterogeneous nuclear ribonucleoprotein U	protein-coding
unique_peak2-38422-1-4--1.94898510510411-1.10720996964787	chr7	25280833	25281182	+	0	NA	intron (NM_153112, intron 1 of 8)	AT_rich|Low_complexity|Low_complexity	-11099	NM_001290461	232969	Mm.181332	NM_146183	ENSMUSG00000064264	Zfp428	2410005H09Rik|AV271806|AW047854|Znf428	zinc finger protein 428	protein-coding
common_peak1-11946-76-131--0.282449733495172-0.739558950667029	chr17	4907035	4909190	+	0	NA	Intergenic	CpG	-86962	NM_001085355	239985	Mm.133401	NM_001085355	ENSMUSG00000069729	Arid1b	8030481M12|9330189K18Rik|AI836955|Ardi1b|B230217J03Rik|mKIAA1235	AT rich interactive domain 1B (SWI-like)	protein-coding
common_peak1-17151-39-42-0.189496492217056-0.418071017975767	chr6	117916626	117917888	+	0	NA	Intergenic	B1F1|SINE|Alu	-29904	NM_001173372	108017	Mm.250392	NM_033648		Fxyd4	0610008I02Rik|AI267073|Chif	FXYD domain-containing ion transport regulator 4	protein-coding
common_peak1-11420-12-12--0.0516637330534535-0.309718203022949	chr15	99505655	99506267	+	0	NA	intron (NM_009597, intron 3 of 11)	RSINE1|SINE|B4	4812	NM_009597	11419	Mm.440107	NM_009597	ENSMUSG00000023017	Asic1	AI843610|ASIC|ASIC1a|Accn2|B530003N02Rik|BNaC2	acid-sensing (proton-gated) ion channel 1	protein-coding
common_peak2-29188-12-16--0.4386868561627-0.368541233333383	chr5	135651088	135651692	+	0	NA	intron (NM_009745, intron 2 of 5)	MTD|LTR|MaLR	7148	NM_009745	12054	Mm.405834	NM_009745	ENSMUSG00000029681	Bcl7b	-	B cell CLL/lymphoma 7B	protein-coding
common_peak1-12992-21-27--0.237865656791368-0.339372226903478	chr19	4231651	4232524	+	0	NA	5' UTR (NM_027196, exon 1 of 4)	5' UTR (NM_027196, exon 1 of 4)	188	NM_027196	69745	Mm.32518	NM_027196	ENSMUSG00000024854	Pold4	2410012M21Rik|AI463381|AW060307|Polds|p12	polymerase (DNA-directed), delta 4	protein-coding
unique_peak1-1929-10-4-1.03448725012141-1.5150158574804	chr14	76665352	76666037	+	0	NA	Intergenic	Intergenic	-149934	NM_207652	21807	Mm.153272	NM_009366	ENSMUSG00000022010	Tsc22d1	AA589566|AW105905|Egr5|TSC-22|Tgfb1i4|Tsc|Tsc22	TSC22 domain family, member 1	protein-coding
unique_peak1-4530-9-3-1.18961340640422-1.57096726280955	chr3	31075004	31075497	+	0	NA	Intergenic	MTA_Mm|LTR|MaLR	26408	NM_008770	18417	Mm.4425	NM_008770	ENSMUSG00000037625	Cldn11	Claudin-11|Claudin11|Osp|Otm	claudin 11	protein-coding
common_peak2-19678-36-21-1.01988946753046-2.24027827302618	chr1	58029783	58030805	+	0	NA	Intergenic	Intergenic	-3366	NM_001159865	51960	Mm.339711	NM_030211	ENSMUSG00000054770	Kctd18	4932411A20Rik|6530404F10Rik	potassium channel tetramerisation domain containing 18	protein-coding
common_peak1-12127-14-10-0.439784541720347-0.519648556297791	chr17	26953216	26953812	+	0	NA	Intergenic	Intergenic	24996	NM_008700	18091	Mm.41974	NM_008700	ENSMUSG00000015579	Nkx2-5	Csx|Nkx-2.5|Nkx2.5|tinman	NK2 homeobox 5	protein-coding
common_peak1-13762-77-75-0.536599066112412-1.74759956072526	chr2	34825370	34827148	+	0	NA	Intergenic	Intergenic	-8967	NM_009421	22029	Mm.239514	NM_009421	ENSMUSG00000026875	Traf1	4732496E14Rik	TNF receptor-associated factor 1	protein-coding
common_peak2-26323-42-38-0.456927109004935-0.908349182838243	chr2	33430618	33431635	+	0	NA	intron (NM_010725, intron 2 of 7)	intron (NM_010725, intron 2 of 7)	64905	NM_010725	16917	Mm.39825	NM_010725	ENSMUSG00000038765	Lmx1b	LMX1.1|LMX1.2	LIM homeobox transcription factor 1 beta	protein-coding
common_peak1-10509-15-14-0.105274154947137-0.330004445983672	chr14	105922549	105923295	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	24917	NR_045921	74864	Mm.159344	NR_045921	ENSMUSG00000022116	4930449E01Rik	-	RIKEN cDNA 4930449E01 gene	ncRNA
common_peak2-30255-26-34--0.201383924786504-0.35535220421655	chr7	12834617	12835607	+	0	NA	Intergenic	Intergenic	10916	NM_134210	171244	Mm.377200	NM_134210	ENSMUSG00000094078	Vmn1r81	V1rg9	vomeronasal 1 receptor 81	protein-coding
common_peak2-31817-8-8--0.164702583494742-1.00793137938329	chr9	41476075	41476569	+	0	NA	Intergenic	MTB|LTR|MaLR	86313	NR_029822	387236		NR_029822	miRBase:MI0000725	Mir125b-1	Mirn125b|Mirn125b-1	microRNA 125b-1	ncRNA
unique_peak1-562-14-2-2.31425365963649-3.28500101358144	chr1	194659053	194659813	+	0	NA	Intergenic	Intergenic	-8466	NR_040468	73455	Mm.414869	NR_040468		1700065J18Rik	-	RIKEN cDNA 1700065J18 gene	ncRNA
common_peak2-23851-37-44-0.034139975156144-0.310681778627721	chr15	102045583	102046757	+	0	NA	TTS (NM_013566)	TTS (NM_013566)	11168	NM_001289695	68744	Mm.352945	NM_153194	ENSMUSG00000046897	Zfp740	1110034O07Rik|AW548228|Znf740	zinc finger protein 740	protein-coding
unique_peak2-36343-5-14--1.61127093161437-1.95509489018123	chr2	92433586	92434000	+	0	NA	promoter-TSS (NR_106081)	promoter-TSS (NR_106081)	-966	NR_106081	102465704		NR_106081	miRBase:MI0023717	Mir7222	mmu-mir-7222	microRNA mir-7222	ncRNA
common_peak1-17472-30-63--0.830324590508127-1.92045994443868	chr7	19920581	19921339	+	0	NA	Intergenic	ORR1D1|LTR|MaLR	-9460	NM_001127324	13870	Mm.280913	NM_007948	ENSMUSG00000003549	Ercc1	Ercc-1	excision repair cross-complementing rodent repair deficiency, complementation group 1	protein-coding
common_peak2-24445-28-53--0.701928382342006-1.32032392063167	chr17	22225049	22225751	+	0	NA	Intergenic	L1_Mur3|LINE|L1	77544	NM_177596	210853	Mm.441622	NM_177596	ENSMUSG00000063383	Zfp947	6720451E15|EG210853|Gm4769	zinc finger protein 947	protein-coding
unique_peak2-37236-8-13--0.802132504110034-0.562038191119711	chr4	89445296	89445897	+	0	NA	Intergenic	Intergenic	90707	NM_175647	242523	Mm.130167	NM_175647	ENSMUSG00000043753	Dmrta1	Dmrt4	doublesex and mab-3 related transcription factor like family A1	protein-coding
common_peak1-15594-74-87-0.25645495834131-0.668004632230112	chr4	129819057	129821190	+	0	NA	Intergenic	Intergenic	-3717	NM_198959	230777	Mm.246595	NM_198959	ENSMUSG00000028778	Hcrtr1	Ox1r	hypocretin (orexin) receptor 1	protein-coding
common_peak2-27459-6-5--0.0195643903408542-0.947717972411649	chr3	90541730	90542076	+	0	NA	intron (NM_001165968, intron 6 of 7)	intron (NM_001165968, intron 6 of 7)	11075	NM_207263	384997	Mm.316644	NM_207263	ENSMUSG00000042250	Pglyrp4	Gm1478|Gm413	peptidoglycan recognition protein 4	protein-coding
unique_peak2-37636-1-6--2.43441193227435-1.56314192529759	chr5	73509328	73509733	+	0	NA	intron (NM_028194, intron 13 of 62)	intron (NM_028194, intron 13 of 62)	111387	NM_173403	231290	Mm.491387	NM_173403		Slc10a4	E130304D01	solute carrier family 10 (sodium/bile acid cotransporter family), member 4	protein-coding
common_peak1-18134-40-52--0.0689447718121006-0.303138254425616	chr8	10662901	10664567	+	0	NA	Intergenic	Intergenic	218720	NR_040705	320014	Mm.403203	NR_040705		B930025P03Rik	-	RIKEN cDNA B930025P03 gene	ncRNA
common_peak2-29801-23-13-0.914412582451476-1.26025077975594	chr6	91016259	91016773	+	0	NA	intron (NM_018815, intron 13 of 39)	PB1D9|SINE|Alu	50304	NM_018815	54563	Mm.28162	NM_018815	ENSMUSG00000030091	Nup210	9830001L10|AI836801|Pom210|gp190|gp210	nucleoporin 210	protein-coding
unique_peak2-36464-6-21--1.894033508257-2.21753093801298	chr2	143089447	143090121	+	0	NA	Intergenic	Intergenic	185556	NM_020595	57329	Mm.157751	NM_020595	ENSMUSG00000027416	Otor	CDRAP|Fdp|MIA|MIAL	otoraplin	protein-coding
unique_peak2-37002-3-6--1.22133801201688-1.08602067057793	chr3	121720440	121720788	+	0	NA	Intergenic	Intergenic	-26764	NM_007378	11304	Mm.3918	NM_007378	ENSMUSG00000028125	Abca4	AW050280|Abc10|Abcr|D430003I15Rik|RmP	ATP-binding cassette, sub-family A (ABC1), member 4	protein-coding
unique_peak2-34321-8-19--1.31670567693979-1.30305656033811	chr13	95891422	95892176	+	0	NA	intron (NM_172263, intron 2 of 19)	intron (NM_172263, intron 2 of 19)	101206	NM_001170669	218461	Mm.100167	NM_172263	ENSMUSG00000021684	Pde8b	B230331L10Rik|C030047E14Rik	phosphodiesterase 8B	protein-coding
unique_peak1-5367-9-3-1.18961340640422-1.57096726280955	chr5	93299214	93299776	+	0	NA	intron (NM_001077595, intron 1 of 9)	intron (NM_001077595, intron 1 of 9)	-27524	NM_001077596	27428	Mm.46014	NM_015756	ENSMUSG00000029381	Shroom3	AL022960|D5Ertd287e|Shrm|Shrm3	shroom family member 3	protein-coding
unique_peak1-1602-8-1-2.00522241794757-2.05605744720049	chr13	37364624	37365144	+	0	NA	Intergenic	Intergenic	-72330	NM_010745	17084	Mm.2639	NM_010745	ENSMUSG00000021423	Ly86	MD-1|MD1	lymphocyte antigen 86	protein-coding
unique_peak1-6601-8-2-1.42025991722641-1.65811743852845	chr8	33652248	33652768	+	0	NA	Intergenic	Intergenic	390141	NR_046039	666589	Mm.367675	NR_046039		Gm8179	EG666589	predicted gene 8179	ncRNA
unique_peak2-39527-2-8--2.08737925770563-1.65811743852845	chr9	65676625	65676945	+	0	NA	TTS (NM_001170907)	TTS (NM_001170907)	-1414	NM_172536	214812	Mm.139231	NM_172536	ENSMUSG00000040524	Zfp609	9830165N24|BC016271|Znf609|mKIAA0295	zinc finger protein 609	protein-coding
unique_peak2-33271-6-19--1.75652998450706-1.84350559086818	chr10	128743650	128744428	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-14642	NM_146284	258281	Mm.377412	NM_146284	ENSMUSG00000049573	Olfr780	MOR114-12	olfactory receptor 780	protein-coding
common_peak1-8413-9-14--0.717277189204299-0.53895475198017	chr10	71347897	71348459	+	0	NA	Intergenic	RMER20B|LTR|ERVK	95260	NR_003644	108950	Mm.212793	NM_175390	ENSMUSG00000043859	1700049L16Rik	-	hematological and neurological expressed 1-like pseudogene	pseudo
common_peak2-20532-62-94--0.159104149528863-0.39933359820233	chr10	63022764	63023893	+	0	NA	intron (NM_001164376, intron 3 of 17)	L1Md_F3|LINE|L1	103069	NM_001164376	216033	Mm.444692	NM_177612	ENSMUSG00000060843	Ctnna3	4930429L08Rik|4933408A16|Catna3|Vr22	catenin (cadherin associated protein), alpha 3	protein-coding
unique_peak1-4595-9-2-1.60465090568306-1.87199725847353	chr3	60307509	60308065	+	0	NA	intron (NM_001253709, intron 1 of 8)	intron (NM_001253709, intron 1 of 8)	2613	NM_001253708	56758	Mm.255723	NM_020007	ENSMUSG00000027763	Mbnl1	Mbnl|mKIAA0428	muscleblind-like 1 (Drosophila)	protein-coding
unique_peak1-5092-10-3-1.35641534500877-1.75805390616669	chr4	149172485	149173005	+	0	NA	Intergenic	Intergenic	-24369	NM_027460	70556	Mm.41877	NM_027460	ENSMUSG00000028982	Slc25a33	5730438N18Rik|Pnc1	solute carrier family 25, member 33	protein-coding
common_peak1-18625-33-19-1.00940946763817-1.9602491241746	chr8	109749679	109750952	+	0	NA	Intergenic	Intergenic	-67055	NM_018823	54446	Mm.390057	NM_018823	ENSMUSG00000003847	Nfat5	AI225870|B130038B15Rik|CAG-8|CAG80|NFATL1|OREBP|TonEBP|mKIAA0827|nfatz	nuclear factor of activated T cells 5	protein-coding
unique_peak1-2963-15-6-1.20480982849805-1.32521814697968	chr17	71485681	71486499	+	0	NA	Intergenic	RMER15|LTR|ERVL	-47228	NM_022882	64898	Mm.227924	NM_022882	ENSMUSG00000024052	Lpin2	2610511G02Rik|AI481352|AW742896	lipin 2	protein-coding
unique_peak2-39749-13-16--0.30899081061257-0.330004445983672	chrUn_GL456367	10576	11283	+	0	NA	NA	NA	NA	NA								
common_peak1-14584-8-7-0.00522241794757061-1.00793137938329	chr3	41195560	41195995	+	0	NA	Intergenic	L1MA7|LINE|L1	101344	NR_040385	78706	Mm.366094	NR_040385		C430002E04Rik	-	RIKEN cDNA C430002E04 gene	ncRNA
common_peak1-8239-12-12--0.0516637330534535-0.309718203022949	chr10	14085879	14086548	+	0	NA	Intergenic	MTE-int|LTR|MaLR	178629	NM_001002268	215798	Mm.440142	NM_001002268	ENSMUSG00000039116	Gpr126	1190004A11Rik|AI449247|AW045736|DREG|Gm222	G protein-coupled receptor 126	protein-coding
common_peak2-25680-45-65--0.184036094013582-0.387582563723712	chr19	11912298	11913168	+	0	NA	Intergenic	Intergenic	-9219	NM_146936	258938	Mm.451671	NM_146936	ENSMUSG00000048292	Olfr1417	MOR266-2	olfactory receptor 1417	protein-coding
common_peak2-22365-31-17-1.05531366937081-1.94848218498813	chr13	28757818	28758593	+	0	NA	intron (NR_045053, intron 5 of 8)	intron (NR_045053, intron 5 of 8)	44537	NR_105787	102466635		NR_105787	miRBase:MI0021897	Mir6368	mmu-mir-6368	microRNA mir-6368	ncRNA
common_peak1-11256-148-108-1.14906980286519-11.7307971153158	chr15	80168492	80172415	+	0	NA	intron (NM_001044308, intron 5 of 36)	CT-rich|Low_complexity|Low_complexity	52785	NM_001044308	239556	Mm.291058	NM_001044308	ENSMUSG00000022416	Cacna1i	Ca(V)3.3	calcium channel, voltage-dependent, alpha 1I subunit	protein-coding
common_peak1-17747-10-11--0.228547155712387-0.31137425193576	chr7	81788982	81789384	+	0	NA	Intergenic	Intergenic	-89517	NM_001038643	108116	Mm.425467	NM_023908	ENSMUSG00000025790	Slco3a1	5830414C08Rik|Anr1|MJAM|OATP-D|R75096|Slc21a11	solute carrier organic anion transporter family, member 3a1	protein-coding
common_peak2-26921-13-11-0.193509529916613-0.379391706698377	chr2	163494364	163494969	+	0	NA	intron (NM_001039390, intron 2 of 4)	L1_Mus2|LINE|L1	10472	NM_001164053	18769	Mm.10091	NM_011106	ENSMUSG00000035268	Pkig	PKIgamma	protein kinase inhibitor, gamma	protein-coding
common_peak2-31498-10-19--0.965512749878593-0.917676348953458	chr8	107031303	107031934	+	0	NA	intron (NM_180958, intron 3 of 19)	MER63D|DNA|AcHobo	2169	NM_180958	320022	Mm.249775	NM_180958	ENSMUSG00000052616	Ccdc79	4930532D21Rik|BB085179|Terb1	coiled-coil domain containing 79	protein-coding
common_peak1-12277-45-71--0.30956697609744-0.585993193419137	chr17	44499610	44500554	+	0	NA	Intergenic	Intergenic	174561	NM_172621	224796	Mm.37666	NM_172621	ENSMUSG00000023959	Clic5	5730531E12Rik|B330005L24|Gm322|jbg	chloride intracellular channel 5	protein-coding
unique_peak1-6454-7-0-2.79909083029819-2.40823996531185	chr7	100502511	100502982	+	0	NA	Intergenic	IAPEY3-int|LTR|ERVK	274357	NM_021427	58238	Mm.113787	NM_021427		Fam181b	A830059I20Rik|AB041569	family with sequence similarity 181, member B	protein-coding
unique_peak2-38980-1-10--3.08648862885404-2.57096726280955	chr8	40647790	40648259	+	0	NA	Intergenic	L1_Mus3|LINE|L1	80008	NM_031195	20288	Mm.239291	NM_031195	ENSMUSG00000025044	Msr1	MRS-A|MSR|MSR-A|SR-AI|SR-AII|Scara1|Scvr	macrophage scavenger receptor 1	protein-coding
common_peak2-28066-24-49--0.850646287007008-1.56058662248874	chr4	63544709	63545565	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-22819	NM_009403	21949	Mm.4664	NM_009403		Tnfsf8	CD153|CD30LG|Cd30l	tumor necrosis factor (ligand) superfamily, member 8	protein-coding
common_peak1-9086-41-52--0.0267717497145386-0.301029995663982	chr11	69765582	69766539	+	0	NA	Intergenic	B3A|SINE|B2	-4368	NM_009204	20528	Mm.10661	NM_009204	ENSMUSG00000018566	Slc2a4	Glut-4|Glut4	solute carrier family 2 (facilitated glucose transporter), member 4	protein-coding
unique_peak1-1949-8-3-1.00522241794757-1.39487600375387	chr14	99099325	99099768	+	0	NA	Intergenic	MIRb|SINE|MIR	345809	NM_175245	76789	Mm.38912	NM_175245	ENSMUSG00000033186	Mzt1	2410129H14Rik|AI120158|Mozart1	mitotic spindle organizing protein 1	protein-coding
unique_peak1-5896-15-5-1.4272022498345-1.61682445937017	chr6	87238102	87238629	+	0	NA	intron (NM_054041, intron 4 of 17)	intron (NM_054041, intron 4 of 17)	47404	NM_054041	69538	Mm.232525	NM_054041	ENSMUSG00000033420	Antxr1	2310008J16Rik|2810405N18Rik|Antrx1|Tem8	anthrax toxin receptor 1	protein-coding
unique_peak1-2032-8-2-1.42025991722641-1.65811743852845	chr15	22714470	22714893	+	0	NA	Intergenic	Intergenic	-69942	NM_001165971	545091	Mm.475598	NM_001165971		Gm5803	EG545091	predicted gene 5803	protein-coding
common_peak2-28484-64-62-0.488166478208687-1.2846003850156	chr4	155601046	155601991	+	0	NA	intron (NM_001008233, intron 2 of 15)	intron (NM_001008233, intron 2 of 15)	1133	NM_001008233	231002	Mm.423124	NM_001008233	ENSMUSG00000078485	Plekhn1	BC025458	pleckstrin homology domain containing, family N member 1	protein-coding
common_peak2-23126-13-15--0.221527969362231-0.308519316180257	chr14	99548038	99548653	+	0	NA	intron (NM_029320, intron 9 of 17)	intron (NM_029320, intron 9 of 17)	-49356	NM_028315	72662	Mm.163339	NM_028315	ENSMUSG00000033166	Dis3	2810028N01Rik	DIS3 mitotic control homolog (S. cerevisiae)	protein-coding
common_peak2-32172-18-30--0.641277159158523-0.738267116931589	chr9	111117958	111118865	+	0	NA	intron (NM_027742, intron 9 of 13)	intron (NM_027742, intron 9 of 13)	55701	NM_026810	17350	Mm.486383	NM_026810	ENSMUSG00000032498	Mlh1	1110035C23Rik|AI317206|AI325952|AI561766	mutL homolog 1 (E. coli)	protein-coding
common_peak2-28985-7-7--0.200909169701811-0.97990265578305	chr5	105797811	105798181	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-22505	NM_001039647	634650	Mm.458435	NM_001039647	ENSMUSG00000092021	Gbp11	EG634650|Gm7141	guanylate binding protein 11	protein-coding
common_peak2-27429-8-12--0.695217300193522-0.475924844171029	chr3	89392050	89392536	+	0	NA	intron (NM_080466, intron 2 of 7)	intron (NM_080466, intron 2 of 7)	68207	NM_080466	140493	Mm.120250	NM_080466		Kcnn3	KCa2.3|SK3|SKCA3	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	protein-coding
common_peak1-13019-36-15-1.47932108616775-3.70968671820992	chr19	5272410	5273553	+	0	NA	TTS (NM_030109)	TTS (NM_030109)	138	NM_153129	107975	Mm.234923	NM_153129	ENSMUSG00000024855	Pacs1	AI325977	phosphofurin acidic cluster sorting protein 1	protein-coding
common_peak1-10674-44-52-0.0939723800053365-0.350851889851556	chr14	52196726	52197913	+	0	NA	intron (NM_001013816, intron 1 of 4)	Lx5|LINE|L1	24854	NM_001013816	434459	Mm.359230	NM_001013816	ENSMUSG00000079244	Gm5622	EG434459	predicted gene 5622	protein-coding
unique_peak2-39900-1-6--2.43441193227435-1.56314192529759	chrX	94121374	94121798	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-146349	NM_001033361	245526	Mm.336164	NM_001033361	ENSMUSG00000031212	Pgr15l	-	G protein-coupled receptor 15-like	protein-coding
unique_peak2-38148-1-6--2.43441193227435-1.56314192529759	chr6	86065285	86065668	+	0	NA	intron (NM_013458, intron 15 of 15)	MLT2B2|LTR|ERVL	37434	NM_001271859	11519	Mm.104155	NM_013458		Add2	2900072M03Rik|add97	adducin 2 (beta)	protein-coding
unique_peak2-33862-1-23--4.2120195109379-5.72042031892562	chr12	20920379	20921280	+	0	NA	Intergenic	RMER17D|LTR|ERVK	-99189	NR_015521	69513	Mm.273972	NR_015521		1700030C10Rik	-	RIKEN cDNA 1700030C10 gene	ncRNA
common_peak1-13484-14-9-0.577288065470282-0.630231561310125	chr2	25575397	25576080	+	0	NA	Intergenic	RLTR6-int|LTR|ERV1	13339	NM_023326	107771	Mm.330057	NM_023326	ENSMUSG00000049086	Bmyc	2900002K07Rik|AW060705|Mycb	brain expressed myelocytomatosis oncogene	protein-coding
unique_peak1-904-21-14-0.662598669657717-0.879255460030357	chr11	40407248	40408355	+	0	NA	Intergenic	Intergenic	98383	NM_134017	108645	Mm.293771	NM_134017	ENSMUSG00000042032	Mat2b	1110064C04Rik|2410018D16Rik|AI182287|AU022853|MAT-II|MATIIbeta|TGR	methionine adenosyltransferase II, beta	protein-coding
unique_peak1-398-14-3-1.89921616035764-2.80787975886178	chr1	154157089	154157564	+	0	NA	Intergenic	Intergenic	76486	NM_025677	66637	Mm.379120	NM_025677	ENSMUSG00000014980	Tsen15	5730449L18Rik|AL023077|Sen15	tRNA splicing endonuclease 15 homolog (S. cerevisiae)	protein-coding
unique_peak2-32862-10-44--2.13543775132091-5.31930449647091	chr10	111164818	111165556	+	0	NA	Intergenic	B1F|SINE|Alu	-133858	NR_045344	71321	Mm.410785	NR_045344	ENSMUSG00000097082	4933440J02Rik	-	RIKEN cDNA 4933440J02 gene	ncRNA
common_peak1-13206-17-37--1.02963117523855-1.57996244908225	chr19	23273262	23273894	+	0	NA	Intergenic	Intergenic	49657	NR_035423	100316672		NR_035423		Mir1192	Mirn1192|mmu-mir-1192	microRNA 1192	ncRNA
common_peak2-25710-26-29-0.0210084965499435-0.304710633611964	chr19	21104833	21105547	+	0	NA	Intergenic	Intergenic	-76498	NM_028953	13409	Mm.219585	NM_028953	ENSMUSG00000024749	Tmc1	4933416G09Rik|Beethoven|Bth|CWEA1|dn	transmembrane channel-like gene family 1	protein-coding
common_peak2-24759-14-31--1.10078383964236-1.53513093355237	chr17	56074526	56075131	+	0	NA	Intergenic	L1MB7|LINE|L1	9854	NM_146249	240120	Mm.441018	NM_146249		Zfp119b	-	zinc finger protein 119b	protein-coding
common_peak2-29179-12-15--0.351224014912361-0.332077462497413	chr5	134957591	134958372	+	0	NA	Intergenic	L1MB8|LINE|L1	-25395	NM_001081464	57080	Mm.332735	NM_020331	ENSMUSG00000023079	Gtf2ird1	1700012P16Rik|BEN|Cream1|ESTM9|GTF3|Gtf2il|MusTRD1|Tg(Alb1-Myc)166.8Sst|WBSCR11|X83320	general transcription factor II I repeat domain-containing 1	protein-coding
common_peak1-12818-16-14-0.211373046659543-0.364171515310935	chr18	67932833	67933618	+	0	NA	Intergenic	B3|SINE|B2	-1305	NM_028112	72124	Mm.307315	NM_028112	ENSMUSG00000079614	Seh1l	2610007A16Rik|AW540070|SEC13L|SEH1A|SEH1B|Seh1	SEH1-like (S. cerevisiae	protein-coding
common_peak2-19997-48-32-0.926533031876361-2.5383910031143	chr1	134098199	134099387	+	0	NA	intron (NM_001033250, intron 1 of 3)	intron (NM_001033250, intron 1 of 3)	4128	NR_029777	723818		NR_029777	miRBase:MI0000646	Mir135b	Mirn135b	microRNA 135b	ncRNA
common_peak2-32232-18-31--0.687080848771648-0.820293215674341	chr9	123366714	123367493	+	0	NA	intron (NM_153168, intron 19 of 20)	intron (NM_153168, intron 19 of 20)	-20716	NM_013860	29806	Mm.10987	NM_013860	ENSMUSG00000025239	Limd1	AW822033|D9Ertd192e	LIM domains containing 1	protein-coding
common_peak1-16981-54-49-0.52922957185501-1.25617732716373	chr6	87041985	87043558	+	0	NA	TTS (NM_013528)	TTS (NM_013528)	-11969	NM_001167938	52372	Mm.282851	NM_001167937		D6Ertd527e	AU043841	DNA segment, Chr 6, ERATO Doi 527, expressed	protein-coding
common_peak2-21678-11-19--0.813234510635749-0.769930178837768	chr11	103412114	103412700	+	0	NA	intron (NM_001033434, intron 7 of 13)	Lx5|LINE|L1	63646	NM_001033434	380730	Mm.380214	NM_001033434	ENSMUSG00000034239	Gm884	LRRC37	predicted gene 884	protein-coding
common_peak2-32419-8-16--1.08224042330277-0.891319708951328	chrX	162901585	162902140	+	0	NA	intron (NM_019773, intron 1 of 2)	intron (NM_019773, intron 1 of 2)	15937	NM_019773	56382	Mm.25306	NM_019773	ENSMUSG00000079316	Rab9	2410064E05Rik|AI195561|Rab9a|Sid6061p	RAB9, member RAS oncogene family	protein-coding
common_peak1-19419-11-44--1.98315951207806-4.90496913713224	chrX	74254705	74255386	+	0	NA	Intergenic	Intergenic	-406782	NM_001201395	74987	Mm.107996	NM_001201395	ENSMUSG00000079525	4930468A15Rik	-	RIKEN cDNA 4930468A15 gene	protein-coding
common_peak2-29337-48-65--0.0734669681236388-0.3078161230877	chr5	148398876	148400108	+	0	NA	intron (NM_010228, intron 20 of 29)	B4A|SINE|B4	138072	NM_010228	14254	Mm.389712	NM_010228	ENSMUSG00000029648	Flt1	AI323757|Flt-1|VEGFR-1|VEGFR1|sFlt1	FMS-like tyrosine kinase 1	protein-coding
common_peak1-11249-22-9-1.32535601020004-2.00244947055753	chr15	80082386	80083315	+	0	NA	3' UTR (NM_178719, exon 6 of 6)	3' UTR (NM_178719, exon 6 of 6)	-2764	NM_001287180	11911	Mm.641	NM_009716	ENSMUSG00000042406	Atf4	Atf-4|C/ATF|CREB2|TAXREB67	activating transcription factor 4	protein-coding
common_peak1-11640-28-51--0.647480598319629-1.1451285992054	chr16	22009509	22010420	+	0	NA	intron (NR_027488, intron 1 of 16)	CpG	407	NR_027488	75826	Mm.297431	NM_029457	ENSMUSG00000022855	Senp2	2310007L05Rik|4930538C18Rik|AI646780|AW554757|Smt3ip2|SuPr-1|mKIAA1331	SUMO/sentrin specific peptidase 2	protein-coding
common_peak2-22583-7-11--0.785871670422967-1.21681515183528	chr13	67637438	67637772	+	0	NA	Intergenic	RLTR16|LTR|ERVK	-10438	NM_133228	170763	Mm.491205	NM_133228	ENSMUSG00000097333	Zfp87	2210039O17Rik|4631412O18Rik|KRAB4|Mzf22|Zfp72	zinc finger protein 87	protein-coding
unique_peak1-553-9-1-2.18961340640422-2.31132995230379	chr1	193512345	193512847	+	0	NA	Intergenic	Intergenic	-29307	NM_172266	226856	Mm.277958	NM_172266	ENSMUSG00000026623	Lpgat1	AI649174|AW112037|BC013667	lysophosphatidylglycerol acyltransferase 1	protein-coding
common_peak1-15755-25-10-1.40241828670781-2.39922209159552	chr4	150544075	150544988	+	0	NA	intron (NM_001081557, intron 6 of 23)	intron (NM_001081557, intron 6 of 23)	-112469	NM_009498	22319	Mm.273930	NM_009498	ENSMUSG00000028955	Vamp3	D130027G05Rik|VAMP-3|ceb	vesicle-associated membrane protein 3	protein-coding
unique_peak2-38614-4-6--0.830815435910851-0.989110657569874	chr7	80198209	80198563	+	0	NA	Intergenic	L1Md_T|LINE|L1	48568	NR_046024	625243	Mm.261798	NR_046024		Gm6567	-	predicted gene 6567	ncRNA
unique_peak2-34714-4-7--1.02346051385325-1.09384600808989	chr15	34539856	34540236	+	0	NA	intron (NM_145469, intron 4 of 10)	(TTC)n|Simple_repeat|Simple_repeat	-64782	NR_045883	71637	Mm.410827	NR_045883		4930413F20Rik	-	RIKEN cDNA 4930413F20 gene	ncRNA
common_peak2-22960-43-53-0.0276756833602345-0.309072945808617	chr14	52196623	52197762	+	0	NA	intron (NM_001013816, intron 1 of 4)	Lx5|LINE|L1	24727	NM_001013816	434459	Mm.359230	NM_001013816	ENSMUSG00000079244	Gm5622	EG434459	predicted gene 5622	protein-coding
common_peak2-23635-8-6-0.197867495889966-1.03789460276074	chr15	83447250	83447663	+	0	NA	intron (NM_022723, intron 14 of 21)	intron (NM_022723, intron 14 of 21)	-21869	NM_183017	223723	Mm.46778	NM_183017	ENSMUSG00000016757	Ttll12	BC055368|D430005B17	tubulin tyrosine ligase-like family, member 12	protein-coding
common_peak2-21493-22-15-0.647284105087405-0.849699271740893	chr11	88615173	88615898	+	0	NA	Intergenic	Intergenic	35578	NR_038058	193280	Mm.396842	NR_038058		C030037D09Rik	9330160M04	RIKEN cDNA C030037D09 gene	ncRNA
common_peak2-20453-15-13-0.204809828498052-0.368541233333383	chr10	40882646	40883397	+	0	NA	Intergenic	ORR1D2|LTR|MaLR	-91631	NM_199058	140741	Mm.290693	NM_199058	ENSMUSG00000046922	Gpr6	AI852874|Gm233	G protein-coupled receptor 6	protein-coding
common_peak2-25276-22-40--0.710267899530679-1.05951140195658	chr18	68299290	68300320	+	0	NA	intron (NM_172631, intron 3 of 5)	intron (NM_172631, intron 3 of 5)	120822	NR_106078	102465702		NR_106078	miRBase:MI0023714	Mir7219	mmu-mir-7219	microRNA mir-7219	ncRNA
common_peak2-30209-15-34--1.11711826638931-1.74023246399357	chr7	110018216	110019320	+	0	NA	Intergenic	L1Md_A|LINE|L1	-6868	NM_147091	259095	Mm.377838	NM_147091	ENSMUSG00000073965	Olfr568	MOR14-11|MOR14-3	olfactory receptor 568	protein-coding
unique_peak2-33973-1-5--2.2120195109379-1.32905871926422	chr12	84217594	84218010	+	0	NA	intron (NM_001282061, intron 15 of 16)	Tigger5|DNA|MER2_type	-177660	NR_046045	74283	Mm.398247	NR_046045		1700085C21Rik	-	RIKEN cDNA 1700085C21 gene	ncRNA
unique_peak1-2389-8-0-3.00522241794757-2.70926996097583	chr15	97529031	97529557	+	0	NA	intron (NM_028003, intron 4 of 16)	intron (NM_028003, intron 4 of 16)	6959	NM_028003	71919	Mm.12255	NM_028003	ENSMUSG00000022466	Rpap3	2310042P20Rik|D15Ertd682e	RNA polymerase II associated protein 3	protein-coding
common_peak2-27814-6-8--0.60452689106201-1.03789460276074	chr3	144993527	144993955	+	0	NA	intron (NM_027770, intron 7 of 59)	intron (NM_027770, intron 7 of 59)	38305	NM_027770	71355	Mm.235570	NM_027770	ENSMUSG00000028197	Col24a1	5430404K19Rik	collagen, type XXIV, alpha 1	protein-coding
unique_peak2-32540-12-19--0.673152109799724-0.546772548767014	chr1	69686965	69687864	+	0	NA	intron (NM_011770, intron 3 of 7)	intron (NM_011770, intron 3 of 7)	45120	NM_011770	22779	Mm.106343	NM_011770	ENSMUSG00000025997	Ikzf2	A730095J18Rik|Helios|Zfpn1a2|Znfn1a2	IKAROS family zinc finger 2	protein-coding
common_peak2-29594-67-50-0.8719861408115-3.15268045042641	chr6	50565837	50567450	+	0	NA	Intergenic	L1_Mus2|LINE|L1	-20054	NM_027564	70821	Mm.157323	NM_027564	ENSMUSG00000029828	4921507P07Rik	TISP74	RIKEN cDNA 4921507P07 gene	protein-coding
unique_peak1-7347-11-4-1.18676548936425-1.68134727924692	chrX	9861043	9861729	+	0	NA	intron (NM_008769, intron 4 of 9)	intron (NM_008769, intron 4 of 9)	31901	NM_008769	18416	Mm.2611	NM_008769	ENSMUSG00000031173	Otc	AI265390|Sf|spf	ornithine transcarbamylase	protein-coding
unique_peak1-2505-24-8-1.6232849013254-2.85636458546265	chr16	13610859	13611748	+	0	NA	intron (NM_028761, intron 18 of 23)	intron (NM_028761, intron 18 of 23)	56960	NM_028761	74108	Mm.182350	NM_028761	ENSMUSG00000022685	Parn	1200003I18Rik|DAN	poly(A)-specific ribonuclease (deadenylation nuclease)	protein-coding
common_peak2-31624-57-68-0.15750858330076-0.422410945175116	chr8	123102394	123103293	+	0	NA	3' UTR (NM_001145897, exon 16 of 16)	3' UTR (NM_001145897, exon 16 of 16)	10132	NM_178856	272551	Mm.275910	NM_178856		Gins2	2210013I18Rik|4833427B12Rik|AI323585|Pfs2	GINS complex subunit 2 (Psf2 homolog)	protein-coding
unique_peak1-946-14-7-0.899216160357645-0.947446088118041	chr11	57090619	57091388	+	0	NA	intron (NM_008165, intron 11 of 15)	intron (NM_008165, intron 11 of 15)	241143	NM_001168667	67726	Mm.25632	NM_026342	ENSMUSG00000020523	Fam114a2	1810073G14Rik|9030624B09Rik	family with sequence similarity 114, member A2	protein-coding
common_peak2-20616-17-20--0.174021084573723-0.306598483909156	chr10	80115687	80116371	+	0	NA	intron (NM_145361, intron 1 of 8)	intron (NM_145361, intron 1 of 8)	3787	NM_145361	208198	Mm.60720	NM_145361	ENSMUSG00000003344	Btbd2	2610037C03Rik|4930512K17Rik	BTB (POZ) domain containing 2	protein-coding
common_peak2-28731-12-10-0.189344366450341-0.386243247519795	chr5	36183546	36184127	+	0	NA	intron (NM_001177697, intron 11 of 18)	intron (NM_001177697, intron 11 of 18)	-52132	NM_027373	70292	Mm.125167	NM_027373	ENSMUSG00000029094	Afap1	2600003E23Rik|9630044L16Rik|AI848729|Afap|mKIAA3018	actin filament associated protein 1	protein-coding
common_peak1-9658-53-32-1.09657889305748-3.58902746971263	chr12	113097927	113099628	+	0	NA	intron (NM_011625, intron 3 of 16)	intron (NM_011625, intron 3 of 16)	46396	NM_026752	68520	Mm.390497	NM_026752	ENSMUSG00000021286	Zfyve21	1110013H04Rik|AW558780|C85416	zinc finger, FYVE domain containing 21	protein-coding
common_peak2-23896-32-29-0.372201423611141-0.621525249893804	chr16	4077430	4078377	+	0	NA	promoter-TSS (NM_026508)	promoter-TSS (NM_026508)	-93	NM_026508	68015	Mm.123366	NM_026508	ENSMUSG00000005981	Trap1	2410002K23Rik|HSP75	TNF receptor-associated protein 1	protein-coding
common_peak2-26638-199-286-0.267524736864429-1.50070485177344	chr2	119476656	119478882	+	0	NA	Intergenic	B1_Mur4|SINE|Alu	10765	NM_027175	69702	Mm.5390	NM_027175	ENSMUSG00000027305	Ndufaf1	2410001M24Rik|CGI-65|CIA30	NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 1	protein-coding
unique_peak1-1957-13-6-0.971117108580164-1.01572999746118	chr14	101852579	101853275	+	0	NA	intron (NM_001081278, intron 15 of 18)	intron (NM_001081278, intron 15 of 18)	155481	NM_001081278	210789	Mm.320639	NM_173380	ENSMUSG00000033083	Tbc1d4	5930406J04Rik|A930035N22|AV295684|As160	TBC1 domain family, member 4	protein-coding
unique_peak1-1996-10-5-0.771452844287613-1.33892459842472	chr15	81100424	81100938	+	0	NA	Intergenic	L1M4|LINE|L1	-18389	NR_077230	78102	Mm.296832	NR_077229		8430426J06Rik	-	RIKEN cDNA 8430426J06 gene	ncRNA
common_peak2-25438-22-11-1.06232160436625-1.51503956548638	chr19	3986549	3987054	+	0	NA	5' UTR (NM_027857, exon 1 of 6)	5' UTR (NM_027857, exon 1 of 6)	140	NM_027857	71670	Mm.29735	NM_027857	ENSMUSG00000024866	Acy3	0610006H10Rik|AA3|AAIII|AW107362|Acy-3|HCBP1	aspartoacylase (aminoacylase) 3	protein-coding
common_peak1-12981-17-21--0.24113528043226-0.322753776620787	chr19	4125900	4126560	+	0	NA	promoter-TSS (NM_016666)	promoter-TSS (NM_016666)	270	NM_025889	66990	Mm.276255	NM_025889		Tmem134	2410001H17Rik|AI463452	transmembrane protein 134	protein-coding
common_peak2-19780-9-14--0.717277189204299-0.53895475198017	chr1	82832233	82832747	+	0	NA	Intergenic	Intergenic	-3568	NM_010472	15463	Mm.392569	NM_010472	ENSMUSG00000026159	Agfg1	AU045498|C130049H11Rik|C85612|D730048C23Rik|Hrb|RAB|Rip	ArfGAP with FG repeats 1	protein-coding
common_peak1-13148-35-21-0.971938639825207-1.97718016252453	chr19	10278466	10279636	+	0	NA	promoter-TSS (NM_001271615)	promoter-TSS (NM_001271615)	359	NM_026919	69038	Mm.375100	NM_026919	ENSMUSG00000036372	Tmem258	1810006K21Rik	transmembrane protein 258	protein-coding
common_peak2-30804-59-81--0.0321880037455058-0.302378744963234	chr7	127478102	127479787	+	0	NA	intron (NM_177213, intron 4 of 30)	B3A|SINE|B2	6746	NM_177213	320631	Mm.78330	NM_177213	ENSMUSG00000054746	Abca15	4930500I12Rik	ATP-binding cassette, sub-family A (ABC1), member 15	protein-coding
common_peak2-29290-21-36--0.639964100362715-0.825714541185117	chr5	144100352	144101106	+	0	NA	Intergenic	PB1D10|SINE|Alu	9742	NR_027874	67672	Mm.30983	NR_027874	ENSMUSG00000089889	0610040B10Rik	-	RIKEN cDNA 0610040B10 gene	ncRNA
common_peak1-14662-46-75--0.349931570194784-0.663690440871714	chr3	58524735	58525871	+	0	NA	intron (NR_045167, intron 2 of 7)	intron (NR_045167, intron 2 of 7)	28792	NR_045167	71301	Mm.254475	NR_045167	ENSMUSG00000097725	4930593A02Rik	4933440I01Rik	RIKEN cDNA 4930593A02 gene	ncRNA
unique_peak1-5012-12-5-1.06381348436648-1.78669045979184	chr4	124741618	124742200	+	0	NA	intron (NM_175223, intron 2 of 5)	intron (NM_175223, intron 2 of 5)	992	NM_175223	75563	Mm.50304	NM_175223	ENSMUSG00000042707	Dnali1	1700023A09Rik|AW049135	dynein, axonemal, light intermediate polypeptide 1	protein-coding
unique_peak2-37881-4-6--0.830815435910851-0.989110657569874	chr5	139344609	139345092	+	0	NA	Intergenic	Intergenic	48816	NM_001195128	384244	Mm.485002	NM_001195128	ENSMUSG00000094504	Gm5294	EG384244	predicted gene 5294	protein-coding
common_peak2-27101-5-6--0.511735258063458-0.947717972411649	chr3	5214996	5215455	+	0	NA	intron (NR_045905, intron 1 of 2)	AT_rich|Low_complexity|Low_complexity	-3329	NM_030708	80892	Mm.41522	NM_030708	ENSMUSG00000025255	Zfhx4	A930021B15|C130041O22Rik|Zfh-4|Zfh4	zinc finger homeodomain 4	protein-coding
common_peak1-12812-25-36--0.347603460283844-0.465043498729215	chr18	67369683	67370578	+	0	NA	intron (NM_010307, intron 5 of 11)	intron (NM_010307, intron 5 of 11)	5117	NM_024190	67064	Mm.73777	NM_024190		Chmp1b	2810405I11Rik|Chmp1b1	charged multivesicular body protein 1B	protein-coding
unique_peak1-6169-8-3-1.00522241794757-1.39487600375387	chr6	145336076	145336603	+	0	NA	non-coding (NR_003625, exon 1 of 1)	non-coding (NR_003625, exon 1 of 1)	194	NR_003625	381827	Mm.179075	NM_001001987		1700073E17Rik	-	ribosomal protein L7 pseudogene	pseudo
unique_peak2-36758-10-19--0.965512749878593-0.917676348953458	chr3	63295287	63296158	+	0	NA	Intergenic	Lx3B|LINE|L1	195705	NM_001289463	17380	Mm.296022	NM_008604	ENSMUSG00000027820	Mme	6030454K05Rik|C85356|CALLA|CD10|NEP|SFE	membrane metallo endopeptidase	protein-coding
unique_peak1-5333-9-1-2.18961340640422-2.31132995230379	chr5	89278632	89279112	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-37413	NM_001197147	54403	Mm.41044	NM_018760	ENSMUSG00000060961	Slc4a4	AI835705|NBC|NBC1	solute carrier family 4 (anion exchanger), member 4	protein-coding
common_peak1-17491-10-20--1.03590207776999-1.03889213727317	chr7	25077314	25077913	+	0	NA	intron (NM_009561, intron 6 of 6)	intron (NM_009561, intron 6 of 6)	6955	NM_009561	22719	Mm.12832	NM_009561	ENSMUSG00000050605	Zfp61	-	zinc finger protein 61	protein-coding
unique_peak1-2877-13-3-1.77847203063777-2.58603100924543	chr17	36252766	36253295	+	0	NA	non-coding (NR_046286, exon 10 of 10)	non-coding (NR_046286, exon 10 of 10)	-4409	NM_001271005	667803	Mm.477808	NM_001271005		C920025E04Rik	-	RIKEN cDNA C920025E04 gene	protein-coding
unique_peak1-417-10-0-3.35641534500877-3.31132995230379	chr1	160259319	160259846	+	0	NA	intron (NM_207583, intron 1 of 7)	intron (NM_207583, intron 1 of 7)	26809	NM_207583	240843	Mm.329579	NM_207583	ENSMUSG00000004031	Brinp2	6430517E21Rik|BB361039|Fam5b|mKIAA1747	bone morphogenic protein/retinoic acid inducible neural-specific 2	protein-coding
unique_peak1-6384-9-2-1.60465090568306-1.87199725847353	chr7	73595708	73596142	+	0	NA	Intergenic	Intergenic	-23562	NM_053080	56847	Mm.140988	NM_053080	ENSMUSG00000015134	Aldh1a3	ALDH6|RALDH3|V1	aldehyde dehydrogenase family 1, subfamily A3	protein-coding
common_peak2-22813-22-11-1.06232160436625-1.51503956548638	chr14	16244170	16244727	+	0	NA	intron (NM_146052, intron 1 of 1)	intron (NM_146052, intron 1 of 1)	27053	NM_146052	218763	Mm.138039	NM_146052	ENSMUSG00000045201	Lrrc3b	BC019794|LRP15	leucine rich repeat containing 3B	protein-coding
unique_peak2-39228-5-8--0.874305337448166-1.10484139239135	chr8	111059381	111059932	+	0	NA	Intergenic	Intergenic	48921	NR_077224	109215	Mm.65282	NR_077224		3010033K07Rik	-	RIKEN cDNA 3010033K07 gene	ncRNA
unique_peak1-1278-10-0-3.35641534500877-3.31132995230379	chr11	118323944	118324499	+	0	NA	Intergenic	LTR16B|LTR|ERVL	-7912	NR_045902	100126224	Mm.441989	NR_045902	ENSMUSG00000086514	Gm11747	OTTMUSG00000003972	predicted gene 11747	ncRNA
common_peak2-28294-43-54-0.0012034719990428-0.303022200133692	chr4	132211109	132212159	+	0	NA	intron (NM_210071, intron 1 of 16)	intron (NM_210071, intron 1 of 16)	16673	NM_010166	14050	Mm.227733	NM_010166	ENSMUSG00000028886	Eya3	AI844637	eyes absent 3 homolog (Drosophila)	protein-coding
common_peak1-10376-24-22-0.269647946710704-0.457753417732779	chr13	93771928	93772704	+	0	NA	Intergenic	Intergenic	-70943	NR_036451	100502942	Mm.441946	NM_177623		Gm4814	C920025J10|EG218444	predicted gene 4814	ncRNA
common_peak2-26779-60-57-0.496310866492959-1.28274482643493	chr2	144368238	144369743	+	0	NA	3' UTR (NM_015754, exon 5 of 5)	3' UTR (NM_015754, exon 5 of 5)	7605	NM_015754	26450	Mm.440564	NM_015754	ENSMUSG00000027428	Rbbp9	Bog	retinoblastoma binding protein 9	protein-coding
common_peak2-29467-28-22-0.529397163764449-0.781990829058356	chr6	29852795	29853658	+	0	NA	exon (NM_001171001, exon 13 of 17)	exon (NM_001171001, exon 13 of 17)	-13787	NM_001037740	320609	Mm.56097	NM_177204	ENSMUSG00000039629	Strip2	D330017J20Rik|Fam40b	striatin interacting protein 2	protein-coding
common_peak1-14962-12-22--0.874785970969374-0.809260849721102	chr3	105052421	105052969	+	0	NA	Intergenic	L1Md_F2|LINE|L1	182933	NM_029228	75269	Mm.307994	NM_029228	ENSMUSG00000051788	4930564D02Rik	-	RIKEN cDNA 4930564D02 gene	protein-coding
common_peak1-13382-25-17-0.691924903902794-0.98872314135509	chr19	46506478	46507734	+	0	NA	intron (NM_001025391, intron 3 of 11)	intron (NM_001025391, intron 3 of 11)	35720	NM_015752	24069	Mm.41210	NM_015752	ENSMUSG00000025231	Sufu	Su(fu)	suppressor of fused homolog (Drosophila)	protein-coding
common_peak1-8386-23-56--1.11112250965566-2.74059030423418	chr10	62650546	62651705	+	0	NA	intron (NM_182992, intron 2 of 19)	intron (NM_182992, intron 2 of 19)	15575	NM_182992	68802	Mm.259767	NM_182992	ENSMUSG00000020067	Mypn	1110056A04Rik|9830112J03|AI853556|mKIAA4170	myopalladin	protein-coding
common_peak2-22302-9-9--0.132314688483142-1.03275496310833	chr13	18717227	18717588	+	0	NA	Intergenic	Intergenic	-91754	NM_172120	218035	Mm.27389	NM_172120	ENSMUSG00000041236	Vps41	AI317346|Vam2|mVam2	vacuolar protein sorting 41 (yeast)	protein-coding
common_peak1-16761-47-98--0.694515195313062-2.18793189280648	chr6	34780140	34781237	+	0	NA	intron (NM_178630, intron 14 of 18)	Lx4B|LINE|L1	-32458	NM_197986	68487	Mm.248440	NM_197986	ENSMUSG00000057137	Tmem140	1110007F12Rik	transmembrane protein 140	protein-coding
unique_peak2-36107-2-17--3.08737925770563-3.78760380288747	chr2	116063787	116064309	+	0	NA	Intergenic	RMER19C|LTR|ERVK	-162216	NR_033447	69974	Mm.440293	NR_033447		2810405F15Rik	-	RIKEN cDNA 2810405F15 gene	ncRNA
unique_peak1-4650-9-1-2.18961340640422-2.31132995230379	chr3	89136238	89136758	+	0	NA	TTS (NM_007910)	TTS (NM_007910)	5452	NM_007910	13639	Mm.16332	NM_007910	ENSMUSG00000028040	Efna4	EFL-4|Epl4|LERK-4	ephrin A4	protein-coding
unique_peak1-1452-9-0-3.18961340640422-3.01029995663981	chr12	104011265	104011784	+	0	NA	intron (NM_025666, intron 10 of 10)	intron (NM_025666, intron 10 of 10)	15339	NM_025666	66622	Mm.34261	NM_025666	ENSMUSG00000041712	Ubr7	5730410I19Rik|AA589405|AW557761	ubiquitin protein ligase E3 component n-recognin 7 (putative)	protein-coding
common_peak2-27830-7-7--0.200909169701811-0.97990265578305	chr3	146500973	146501396	+	0	NA	Intergenic	MTC|LTR|MaLR	-14147	NM_027594	70892	Mm.187793	NM_027594	ENSMUSG00000036745	Ttll7	1110049N09Rik|4921517B04Rik|C630030B20|Ttll7s	tubulin tyrosine ligase-like family, member 7	protein-coding
common_peak2-32252-65-95--0.0927965612440289-0.330377790922753	chrX	7713801	7714830	+	0	NA	Intergenic	Intergenic	-4331	NM_026137	73447	Mm.284162	NM_026137	ENSMUSG00000031166	Wdr13	1700060B08Rik|5730411P10Rik|DXHXS7467e|W51679|mMg21	WD repeat domain 13	protein-coding
unique_peak2-35691-1-6--2.43441193227435-1.56314192529759	chr18	24050980	24051412	+	0	NA	3' UTR (NM_001162942, exon 8 of 8)	3' UTR (NM_001162942, exon 8 of 8)	-61993	NM_027007	69256	Mm.218343	NM_027007	ENSMUSG00000024276	Zfp397	2810411K16Rik|6720480F11Rik|AI461664	zinc finger protein 397	protein-coding
unique_peak2-33330-4-15--2.02346051385325-2.4322161449009	chr11	19920159	19920796	+	0	NA	intron (NM_033523, intron 5 of 5)	ID_B1|SINE|B4	92477	NM_146243	66713	Mm.259045	NM_146243	ENSMUSG00000020152	Actr2	4921510D23Rik|AA409782|Arp2|D6Ertd746e	ARP2 actin-related protein 2	protein-coding
common_peak1-12482-18-36--0.896534214400599-1.30767018140165	chr17	84956578	84957485	+	0	NA	intron (NM_177606, intron 4 of 29)	intron (NM_177606, intron 4 of 29)	45796	NM_177606	213556	Mm.215159	NM_177606	ENSMUSG00000040852	Plekhh2	AI256725|E030001K05|mKIAA2028	pleckstrin homology domain containing, family H (with MyTH4 domain) member 2	protein-coding
unique_peak1-5973-9-1-2.18961340640422-2.31132995230379	chr6	94755905	94756374	+	0	NA	Intergenic	Intergenic	-106000	NM_008377	16206	Mm.245210	NM_008377	ENSMUSG00000030029	Lrig1	D6Bwg0781e|Img|LIG-1	leucine-rich repeats and immunoglobulin-like domains 1	protein-coding
common_peak2-21107-16-5-1.53330114154691-1.80287260729378	chr11	52098052	52098399	+	0	NA	Intergenic	Intergenic	-2473	NM_009331	21414	Mm.31630	NM_009331	ENSMUSG00000000782	Tcf7	AI465550|TCF-1|Tcf1	transcription factor 7, T cell specific	protein-coding
common_peak1-10611-14-15--0.100783839642355-0.301029995663982	chr14	32165254	32165982	+	0	NA	exon (NM_009796, exon 7 of 21)	exon (NM_009796, exon 7 of 21)	15708	NM_009796	12339	Mm.201535	NM_009796	ENSMUSG00000021893	Capn7	AU022319|PalBH	calpain 7	protein-coding
common_peak2-21868-39-71--0.554163754523159-1.18183063007831	chr12	55230035	55230934	+	0	NA	Intergenic	B1_Mur1|SINE|Alu	74377	NM_028133	112407	Mm.133037	NM_028133	ENSMUSG00000035105	Egln3	2610021G09Rik|AI505553|AI648162|Hif-p4h-3|Phd3|SM-20	egl-9 family hypoxia-inducible factor 3	protein-coding
common_peak1-19017-12-12--0.0516637330534535-0.309718203022949	chr9	62980166	62980841	+	0	NA	Intergenic	MIRc|SINE|MIR	14284	NM_172446	207667	Mm.36349	NM_172446	ENSMUSG00000022245	Skor1	AV273001|C230094B15Rik|Corl1|Lbxcor1	SKI family transcriptional corepressor 1	protein-coding
common_peak2-31097-29-35--0.0576349208272013-0.301029995663967	chr8	26158028	26159199	+	0	NA	intron (NM_031257, intron 10 of 11)	Charlie1a|DNA|MER1_type	-9179	NM_001081187	330723	Mm.334452	NM_001081187		Htra4	B430206E18Rik	HtrA serine peptidase 4	protein-coding
unique_peak1-6676-13-3-1.77847203063777-2.58603100924543	chr8	23169650	23170357	+	0	NA	intron (NM_007511, intron 1 of 20)	intron (NM_007511, intron 1 of 20)	543	NM_007511	11979	Mm.87854	NM_007511	ENSMUSG00000006567	Atp7b	Atp7a|WND|tx	ATPase, Cu++ transporting, beta polypeptide	protein-coding
common_peak1-13400-183-137-1.17798140908164-15.5118419724814	chr19	47507364	47511028	+	0	NA	intron (NM_001164717, intron 1 of 13)	intron (NM_001164717, intron 1 of 13)	29705	NM_001164717	14218	Mm.127560	NM_008018	ENSMUSG00000053617	Sh3pxd2a	2310014D11Rik|AA589508|AI256723|AI413738|C230050L11|EG329070|Fish|Gm5098|Sh3md1|TSK5|Tks5	SH3 and PX domains 2A	protein-coding
unique_peak2-34908-3-10--1.87341470859657-1.75805390616669	chr15	83166468	83167029	+	0	NA	intron (NM_025445, intron 3 of 15)	intron (NM_025445, intron 3 of 15)	13929	NM_025445	66251	Mm.258910	NM_025445	ENSMUSG00000054277	Arfgap3	0610009H19Rik|1810004P07Rik|1810035F16Rik|9130416J18Rik|Arfgap1	ADP-ribosylation factor GTPase activating protein 3	protein-coding
common_peak2-19752-8-6-0.197867495889966-1.03789460276074	chr1	75248534	75248861	+	0	NA	intron (NM_008985, intron 18 of 22)	intron (NM_008985, intron 18 of 22)	12086	NM_008985	19275	Mm.2902	NM_008985	ENSMUSG00000026204	Ptprn	IA-2|mIA-A|mKIAA4064	protein tyrosine phosphatase, receptor type, N	protein-coding
unique_peak2-35697-9-11--0.395349094316936-0.344532117358383	chr18	24722290	24722979	+	0	NA	Intergenic	ORR1B1|LTR|MaLR	-33929	NM_144861	225283	Mm.28427	NM_144861	ENSMUSG00000040446	Rprd1a	C77387|mKIAA4077	regulation of nuclear pre-mRNA domain containing 1A	protein-coding
common_peak2-27593-16-10-0.658832023630764-0.699649909729472	chr3	102723595	102724154	+	0	NA	intron (NM_011516, intron 12 of 32)	MTD|LTR|MaLR	16149	NM_011516	20957	Mm.243849	NM_011516	ENSMUSG00000027855	Sycp1	SCP1	synaptonemal complex protein 1	protein-coding
unique_peak2-39719-4-7--1.02346051385325-1.09384600808989	chr9	120741812	120742208	+	0	NA	Intergenic	Intergenic	82358	NR_040742	76402	Mm.436588	NR_040742		1700020M21Rik	-	RIKEN cDNA 1700020M21 gene	ncRNA
common_peak1-9257-79-42-1.40257041247452-7.7978952250187	chr11	86858618	86861062	+	0	NA	intron (NM_025638, intron 4 of 9)	L1MD2|LINE|L1	27799	NM_025638	66569	Mm.281887	NM_025638	ENSMUSG00000061666	Gdpd1	2610020H15Rik	glycerophosphodiester phosphodiesterase domain containing 1	protein-coding
common_peak1-8359-17-19--0.103631756682325-0.301029995663974	chr10	59425192	59426195	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-11175	NM_029083	74747	Mm.21697	NM_029083	ENSMUSG00000020108	Ddit4	5830413E08Rik|AA415483|REDD1|Rtp801|dig2	DNA-damage-inducible transcript 4	protein-coding
unique_peak2-33975-2-5--1.50241675698448-1.08602067057793	chr12	84233535	84233986	+	0	NA	intron (NM_001282061, intron 15 of 16)	B4A|SINE|B4	-193618	NR_046045	74283	Mm.398247	NR_046045		1700085C21Rik	-	RIKEN cDNA 1700085C21 gene	ncRNA
common_peak2-25906-41-41-0.3088312820699-0.584217371416963	chr19	46044513	46045790	+	0	NA	intron (NM_198296, intron 5 of 25)	intron (NM_198296, intron 5 of 25)	27827	NM_198296	71617	Mm.210949	NM_198296	ENSMUSG00000039901	9130011E15Rik	AI431055|AW050122	RIKEN cDNA 9130011E15 gene	protein-coding
unique_peak1-502-8-2-1.42025991722641-1.65811743852845	chr1	180410643	180411179	+	0	NA	intron (NM_026626, intron 6 of 6)	intron (NM_026626, intron 6 of 6)	-48345	NM_001161665	269152	Mm.129727	NM_177724	ENSMUSG00000026494	Kif26b	4832420M10|BC056349|D230039L06Rik	kinesin family member 26B	protein-coding
unique_peak2-33940-0-4--3.16205902536157-1.10720996964787	chr12	74228242	74228609	+	0	NA	intron (NM_008612, intron 1 of 7)	intron (NM_008612, intron 1 of 7)	3721	NM_008612	17420	Mm.246750	NM_008612	ENSMUSG00000021103	Mnat1	E130115E11Rik|MAT1|P36	menage a trois 1	protein-coding
unique_peak1-71-8-0-3.00522241794757-2.70926996097583	chr1	36461378	36461849	+	0	NA	exon (NM_001277076, exon 24 of 53)	exon (NM_001277076, exon 24 of 53)	32477	NM_001277076	100534273	Mm.389112	NM_001277076		Fer1l5	4930533C12Rik	fer-1-like 5 (C. elegans)	protein-coding
common_peak1-15846-8-16--1.08224042330277-0.891319708951328	chr5	3300712	3301223	+	0	NA	Intergenic	Intergenic	-43345	NM_009873	12571	Mm.31672	NM_009873	ENSMUSG00000040274	Cdk6	5830411I20|AI504062|Crk2	cyclin-dependent kinase 6	protein-coding
common_peak1-11084-20-22--0.03548717146582-0.301029995663994	chr15	59386556	59387517	+	0	NA	intron (NM_026746, intron 4 of 6)	RCHARR1|DNA|MER1_type	-93173	NM_144549	211770	Mm.40298	NM_144549	ENSMUSG00000032501	Trib1	A530090O15Rik|TRB-1|Trb1	tribbles homolog 1 (Drosophila)	protein-coding
unique_peak1-2318-8-1-2.00522241794757-2.05605744720049	chr15	82247041	82247555	+	0	NA	Intergenic	Intergenic	-9674	NM_010005	13101	Mm.174372	NM_010005	ENSMUSG00000094806	Cyp2d10	AI303445|Cyp2d|P450-2D	cytochrome P450, family 2, subfamily d, polypeptide 10	protein-coding
common_peak2-25914-10-13--0.450939577048835-0.386243247519795	chr19	46348973	46349372	+	0	NA	intron (NM_178930, intron 29 of 39)	RLTR25B|LTR|ERVK	-30055	NM_001177369	18034	Mm.102365	NM_019408	ENSMUSG00000025225	Nfkb2	NF-kappaB2|lyt|p49|p49/p100|p50B|p52	nuclear factor of kappa light polypeptide gene enhancer in B cells 2, p49/p100	protein-coding
common_peak1-12689-32-39--0.0428360756677026-0.301029995663967	chr18	39388395	39390093	+	0	NA	intron (NM_175164, intron 13 of 22)	intron (NM_175164, intron 13 of 22)	236445	NM_175164	71302	Mm.329396	NM_175164	ENSMUSG00000036452	Arhgap26	1810044B20Rik|2610010G17Rik|4933432P15Rik|AI853435|mKIAA0621	Rho GTPase activating protein 26	protein-coding
common_peak1-10822-18-15-0.312919151228352-0.456667090758524	chr14	101639785	101640751	+	0	NA	Intergenic	LTRIS2|LTR|ERV1	-40982	NM_029680	76627	Mm.31415	NM_029680	ENSMUSG00000042888	Prr30	1700110M21Rik	proline rich 30	protein-coding
common_peak1-12042-9-11--0.395349094316936-0.344532117358383	chr17	21475056	21475553	+	0	NA	Intergenic	L1Md_F3|LINE|L1	24323	NM_134200	171234	Mm.405416	NM_134200	ENSMUSG00000058030	Vmn1r237	V1rf3|Vfrf3	vomeronasal 1 receptor 237	protein-coding
common_peak1-15459-33-49--0.312518627249196-0.498996592876743	chr4	101264299	101265404	+	0	NA	intron (NM_001164583, intron 1 of 18)	RLTR17|LTR|ERVK	41652	NM_001164583	72685	Mm.76494	NM_198412	ENSMUSG00000028528	Dnajc6	2810027M23Rik|mKIAA0473	DnaJ (Hsp40) homolog, subfamily C, member 6	protein-coding
common_peak1-16686-33-42--0.0949271921765691-0.311623594475992	chr6	13069619	13070708	+	0	NA	Intergenic	L1MC2|LINE|L1	50404	NM_027992	71900	Mm.27742	NM_027992	ENSMUSG00000029571	Tmem106b	2310036D22Rik|5830455K21Rik|6430519M21Rik|AI428776|AI661344	transmembrane protein 106B	protein-coding
common_peak1-10102-10-6-0.549060422951165-1.21398586181642	chr13	28417916	28418506	+	0	NA	Intergenic	Lx6|LINE|L1	183858	NM_023746	28078	Mm.155058	NM_023746	ENSMUSG00000017064	Prl5a1	1600013P04Rik|D13Wsu14e|PLP-L|Prlpl	prolactin family 5, subfamily a, member 1	protein-coding
unique_peak1-535-10-3-1.35641534500877-1.75805390616669	chr1	187135122	187135620	+	0	NA	intron (NM_198653, intron 12 of 22)	intron (NM_198653, intron 12 of 22)	-1827	NR_029580	387189		NR_029580	miRBase:MI0000236	Mir194-1	Mirn194|Mirn194-1|miR-194	microRNA 194-1	ncRNA
unique_peak2-37929-1-4--1.94898510510411-1.10720996964787	chr5	146683390	146683714	+	0	NA	intron (NM_007818, intron 4 of 12)	RLTR20C|LTR|ERVK	7878	NM_007818	13112	Mm.332844	NM_007818	ENSMUSG00000056035	Cyp3a11	AI256190|Cyp3a|IIIAm1|Pcn	cytochrome P450, family 3, subfamily a, polypeptide 11	protein-coding
unique_peak2-34100-8-13--0.802132504110034-0.562038191119711	chr13	13954697	13955294	+	0	NA	Intergenic	RMER17B|LTR|ERVK	78189	NM_010317	14706	Mm.215394	NM_010317	ENSMUSG00000021303	Gng4	-	guanine nucleotide binding protein (G protein), gamma 4	protein-coding
common_peak2-20234-44-62--0.155387088931382-0.346662596190348	chr1	181623026	181624041	+	0	NA	Intergenic	MT2_Mm|LTR|ERVL	25171	NM_178653	109232	Mm.136458	NM_178653	ENSMUSG00000038936	Sccpdh	AW214504|C330023F11Rik	saccharopine dehydrogenase (putative)	protein-coding
common_peak1-15650-16-10-0.658832023630764-0.699649909729472	chr4	135521242	135522025	+	0	NA	intron (NM_178389, intron 2 of 9)	B2_Mm1t|SINE|B2	553	NM_178389	74246	Mm.247946	NM_178389	ENSMUSG00000028671	Gale	2310002A12Rik|AI323962	galactose-4-epimerase, UDP	protein-coding
common_peak1-12899-148-209-0.203008609975997-0.825830017633898	chr18	82691345	82693576	+	0	NA	intron (NM_001025245, intron 3 of 3)	intron (NM_001025245, intron 3 of 3)	-31395	NM_001025256	17196	Mm.252063	NM_010777	ENSMUSG00000041607	Mbp	C76307|Hmbpr|R75289|golli-mbp|mld|shi	myelin basic protein	protein-coding
common_peak2-31186-186-299-0.0859912272551622-0.42810057588443	chr8	47989370	47992105	+	0	NA	Intergenic	Intergenic	-81542	NM_177304	320981	Mm.211429	NM_177304	ENSMUSG00000038173	Enpp6	4833421B01Rik|B830047L21Rik|D8Ertd514e|E-NPP 6|Npp6	ectonucleotide pyrophosphatase/phosphodiesterase 6	protein-coding
unique_peak2-35185-10-20--1.03590207776999-1.03889213727317	chr16	55504907	55505859	+	0	NA	Intergenic	Intergenic	-222033	NM_178720	239852	Mm.245045	NM_178720	ENSMUSG00000064310	Zpld1	9430016A21Rik	zona pellucida like domain containing 1	protein-coding
unique_peak1-6177-9-3-1.18961340640422-1.57096726280955	chr6	145793493	145794020	+	0	NA	Intergenic	Intergenic	20184	NM_001271768	79362	Mm.154529	NM_024469	ENSMUSG00000030256	Bhlhe41	6430520M22Rik|Bhlhb2l|Bhlhb3|DEC2|Sharp1	basic helix-loop-helix family, member e41	protein-coding
common_peak1-8103-21-42--0.856775489435862-1.3806499615138	chr1	181841790	181842513	+	0	NA	Intergenic	Intergenic	-49069	NM_001033285	226751	Mm.259655	NM_001033285	ENSMUSG00000026490	Cdc42bpa	A930014J19Rik|DMPK-like	CDC42 binding protein kinase alpha	protein-coding
common_peak1-15543-21-53--1.18539823689723-2.7322447134298	chr4	120148381	120149312	+	0	NA	intron (NM_013883, intron 7 of 16)	intron (NM_013883, intron 7 of 16)	-55990	NM_177570	194219	Mm.29788	NM_177570	ENSMUSG00000047518	Slfnl1	4933406A14Rik	schlafen like 1	protein-coding
unique_peak2-39178-5-6--0.511735258063458-0.947717972411649	chr8	95012187	95012623	+	0	NA	Intergenic	Intergenic	130710	NM_018826	54352	Mm.101153	NM_018826	ENSMUSG00000031737	Irx5	-	Iroquois related homeobox 5 (Drosophila)	protein-coding
common_peak1-13467-75-87-0.279635373105988-0.749552738149672	chr19	61199039	61200413	+	0	NA	Intergenic	MTB|LTR|MaLR	52486	NM_001177513	633057	Mm.426097	NM_001177513	ENSMUSG00000094649	Gm7102	EG633057	predicted gene 7102	protein-coding
unique_peak1-5819-9-5-0.604650905683064-1.21398586181642	chr6	71823505	71823964	+	0	NA	intron (NM_001253686, intron 13 of 13)	B1_Mur4|SINE|Alu	35022	NM_027275	69956	Mm.30256	NM_027275	ENSMUSG00000063884	Ptcd3	2610034F17Rik|2810422B04Rik|AA589622|AU045708|MRP-S39	pentatricopeptide repeat domain 3	protein-coding
unique_peak2-38287-3-6--1.22133801201688-1.08602067057793	chr6	134817398	134817772	+	0	NA	Intergenic	B3A|SINE|B2	20218	NR_074084	14760	Mm.4787	NM_008157	ENSMUSG00000032641	Gpr19	-	G protein-coupled receptor 19	protein-coding
common_peak2-20157-12-10-0.189344366450341-0.386243247519795	chr1	169969304	169969843	+	0	NA	Intergenic	B1_Mur3|SINE|Alu	349884	NM_033652	110648	Mm.330081	NM_033652	ENSMUSG00000026686	Lmx1a	Lmx1.1|dr|dreher|sst	LIM homeobox transcription factor 1 alpha	protein-coding
common_peak2-26382-111-190--0.15973503662558-0.518277600514519	chr2	49451034	49452358	+	0	NA	Intergenic	Lx5|LINE|L1	-23138	NM_008449	16574	Mm.256342	NM_008449	ENSMUSG00000026764	Kif5c	KINN|Khc|NKHC|NKHC2	kinesin family member 5C	protein-coding
common_peak2-27117-25-52--0.866070549218093-1.7388889233551	chr3	14610852	14611404	+	0	NA	intron (NM_001099674, intron 1 of 3)	CpG	128	NM_001099674	69126	Mm.389020	NM_001099674	ENSMUSG00000078784	1810022K09Rik	AI746582|AL023036	RIKEN cDNA 1810022K09 gene	protein-coding
unique_peak1-5570-12-0-3.64877598508764-4.21441993929574	chr5	148359975	148360516	+	0	NA	TTS (NM_028291)	TTS (NM_028291)	118089	NM_028291	72587	Mm.320469	NM_028291	ENSMUSG00000029647	Pan3	2700050F09Rik|A430027N15Rik|AU014670	PAN3 polyA specific ribonuclease subunit homolog (S. cerevisiae)	protein-coding
common_peak1-19384-16-13-0.310908720210457-0.417187467413082	chrX	38589457	38590317	+	0	NA	Intergenic	L1Md_T|LINE|L1	-164591	NM_016886	53623	Mm.327681	NM_016886	ENSMUSG00000001986	Gria3	2900064I19Rik|GluA3|GluR-C|GluR-K3|Glur-3|Glur3|Gluralpha3	glutamate receptor, ionotropic, AMPA3 (alpha 3)	protein-coding
common_peak2-26509-26-21-0.468467473521165-0.647723624534446	chr2	90500334	90501122	+	0	NA	Intergenic	B4A|SINE|B4	-16644	NM_021512	59015	Mm.24532	NM_021512	ENSMUSG00000051329	Nup160	160kDa|2810011M03Rik|AA414952|AU020188|Gtl-13|Gtl1-13|Gtl13|mKIAA0197	nucleoporin 160	protein-coding
common_peak2-21995-24-37--0.454717610675869-0.572500200098104	chr12	54795124	54796068	+	0	NA	intron (NM_013780, intron 4 of 11)	intron (NM_013780, intron 4 of 11)	445932	NM_013780	27386	Mm.247044	NM_013780	ENSMUSG00000021010	Npas3	4930423H22Rik|bHLHe12	neuronal PAS domain protein 3	protein-coding
common_peak2-31048-11-8-0.338768582809301-1.14218153353838	chr8	15027724	15028256	+	0	NA	exon (NM_029116, exon 2 of 2)	exon (NM_029116, exon 2 of 2)	16965	NM_029116	74901	Mm.46675	NM_029116	ENSMUSG00000055675	Kbtbd11	2900016B01Rik|4930465M17Rik|mKIAA0711	kelch repeat and BTB (POZ) domain containing 11	protein-coding
common_peak2-31811-29-33-0.0248272393647717-0.313805205020552	chr9	40781767	40782942	+	0	NA	intron (NM_019465, intron 9 of 9)	MTEa|LTR|MaLR	-10159	NM_001081121	70989	Mm.335087	NM_001081121	ENSMUSG00000032023	4931429I11Rik	BB239335|jhy	RIKEN cDNA 4931429I11 gene	protein-coding
unique_peak1-4730-8-3-1.00522241794757-1.39487600375387	chr3	106832448	106832970	+	0	NA	Intergenic	Intergenic	-6371	NM_008418	16491	Mm.30640	NM_008418	ENSMUSG00000047959	Kcna3	Kca1-3|Kv1.3|Mk-3	potassium voltage-gated channel, shaker-related subfamily, member 3	protein-coding
unique_peak1-7392-14-0-3.89921616035764-4.8164799306237	chrX	103481675	103482400	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-23128	NR_105803	102465963		NR_105803	miRBase:MI0021913	Mir6382	mmu-mir-6382	microRNA mir-6382	ncRNA
unique_peak1-3398-6-0-2.5653981103803-2.10720996964787	chr19	4470305	4470650	+	0	NA	intron (NM_134164, intron 1 of 7)	MTC|LTR|MaLR	6666	NM_134164	171180	Mm.262270	NM_134164	ENSMUSG00000049303	Syt12	-	synaptotagmin XII	protein-coding
common_peak1-11508-8-7-0.00522241794757061-1.00793137938329	chr16	15253060	15253540	+	0	NA	Intergenic	Intergenic	341311	NM_001159351	70620	Mm.235407	NM_023585		Ube2v2	1110021H13Rik|4632410D19Rik|5730524P06Rik|6820402M05|AI848315|C81524|MMS2	ubiquitin-conjugating enzyme E2 variant 2	protein-coding
unique_peak1-7294-13-0-3.77847203063777-4.51544993495972	chr9	108336567	108337024	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-2018	NM_001004192	434439	Mm.78372	NM_001004192	ENSMUSG00000050641	BC048562	-	cDNA sequence BC048562	protein-coding
common_peak1-17452-28-14-1.14606852421294-2.01759298435799	chr7	19011875	19012707	+	0	NA	intron (NM_054063, intron 3 of 4)	intron (NM_054063, intron 3 of 4)	5113	NM_054063	114871	Mm.362025	NM_054063	ENSMUSG00000030373	Psg28	cea16	pregnancy-specific glycoprotein 28	protein-coding
unique_peak2-39455-6-13--1.2419568116773-1.58711810488664	chr9	50856945	50857394	+	0	NA	Intergenic	L1_Mus2|LINE|L1	28030	NM_001033534	244864	Mm.335152	NM_001033534	ENSMUSG00000060594	Layn	E030012M19Rik|Gm511	layilin	protein-coding
unique_peak1-2644-8-2-1.42025991722641-1.65811743852845	chr16	45847401	45847924	+	0	NA	Intergenic	L2a|LINE|L2	-3171	NM_001252442	208177	Mm.211477	NM_153412	ENSMUSG00000033149	Phldb2	AV253284|C820004H04Rik|LL5b|LL5beta	pleckstrin homology-like domain, family B, member 2	protein-coding
common_peak1-16762-8-11--0.579740082773585-1.14218153353838	chr6	34796671	34797088	+	0	NA	exon (NM_001289656, exon 19 of 20)	exon (NM_001289656, exon 19 of 20)	-16267	NM_197986	68487	Mm.248440	NM_197986	ENSMUSG00000057137	Tmem140	1110007F12Rik	transmembrane protein 140	protein-coding
common_peak1-19234-21-36--0.639964100362715-0.825714541185117	chr9	108306247	108307002	+	0	NA	3' UTR (NM_001135198, exon 7 of 7)	3' UTR (NM_001135198, exon 7 of 7)	11459	NM_053216	112418	Mm.78287	NM_053216	ENSMUSG00000032611	1700102P08Rik	AI593206	RIKEN cDNA 1700102P08 gene	protein-coding
common_peak1-8076-99-140-0.0798063908838573-0.361901174294291	chr1	178336552	178338795	+	0	NA	Intergenic	MER97c|DNA|MER1_type?	-132230	NM_176916	319455	Mm.338001	NM_176916	ENSMUSG00000055214	Pld5	B230365F16Rik	phospholipase D family, member 5	protein-coding
common_peak1-9284-10-9-0.0344872501214071-1.05503135781948	chr11	88204683	88205197	+	0	NA	intron (NM_054043, intron 9 of 13)	intron (NM_054043, intron 9 of 13)	38665	NR_039545	100628571		NR_039545	miRBase:MI0016973	Mir378b	mmu-mir-378b	microRNA 378b	ncRNA
common_peak2-20008-24-12-1.09277018462662-1.73042999925837	chr1	135021315	135021941	+	0	NA	Intergenic	MLT1C|LTR|MaLR	-6115	NM_133819	108954	Mm.293628	NM_133819	ENSMUSG00000046062	Ppp1r15b	1810033K10Rik|AI606441|C530022L24Rik|CReP	protein phosphatase 1, regulatory (inhibitor) subunit 15b	protein-coding
common_peak1-14446-17-12-0.517856620063946-0.647240723060192	chr2	181693234	181694073	+	0	NA	Intergenic	Intergenic	-32278	NM_001205282	672125	Mm.489571	NM_001205282	ENSMUSG00000053277	Gm14496	OTTMUSG00000016837	predicted gene 14496	protein-coding
common_peak1-12480-8-28--1.85275857718-2.85636458546265	chr17	84511966	84512459	+	0	NA	Intergenic	Intergenic	34212	NR_045458	74473	Mm.399575	NR_045458		4933433H22Rik	-	RIKEN cDNA 4933433H22 gene	ncRNA
common_peak2-30360-54-65-0.12869164227128-0.378729626038611	chr7	28338164	28339395	+	0	NA	promoter-TSS (NM_011116)	promoter-TSS (NM_011116)	470	NM_175107	66367	Mm.29831	NM_175107	ENSMUSG00000049643	2310022A10Rik	-	RIKEN cDNA 2310022A10 gene	protein-coding
unique_peak2-33892-4-9--1.34538860874061-1.36011389749466	chr12	40888196	40888781	+	0	NA	Intergenic	B1_Mur3|SINE|Alu	-27673	NM_001146196	20259	Mm.2416	NM_009132	ENSMUSG00000002565	Scin	AW545522|adseverin	scinderin	protein-coding
common_peak1-13635-11-16--0.578769256998726-0.503257505534083	chr2	25533565	25534276	+	0	NA	intron (NM_177840, intron 2 of 6)	intron (NM_177840, intron 2 of 6)	1614	NM_001276448	620709	Mm.99499	NM_177840	ENSMUSG00000045684	Lcn6	9230101D24Rik	lipocalin 6	protein-coding
common_peak2-24700-9-11--0.395349094316936-0.344532117358383	chr17	45573833	45574357	+	0	NA	Intergenic	MERVL_2A-int|LTR|ERVL	-3439	NM_152810	71702	Mm.28270	NM_152810	ENSMUSG00000023932	Cdc5l	1200002I02Rik|AA408004|PCDC5RP	cell division cycle 5-like (S. pombe)	protein-coding
common_peak1-15333-13-18--0.469455482805817-0.409888142029227	chr4	46650030	46650797	+	0	NA	intron (NM_198664, intron 3 of 12)	intron (NM_198664, intron 3 of 12)	12658	NM_198664	381605	Mm.331595	NM_198664	ENSMUSG00000039813	Tbc1d2	A630005A06Rik|BC022630|Gm1037|PARIS-1|PARIS1	TBC1 domain family, member 2	protein-coding
unique_peak1-3356-28-4-2.7310310249341-5.93487602603461	chr19	37814087	37815050	+	0	NA	Intergenic	Intergenic	42270	NM_007811	13082	Mm.42230	NM_007811	ENSMUSG00000024987	Cyp26a1	Cyp26|P450RA|P450RAI|RAH	cytochrome P450, family 26, subfamily a, polypeptide 1	protein-coding
unique_peak2-36979-5-9--1.02630843089322-1.21398586181642	chr3	116835671	116836054	+	0	NA	Intergenic	(TCCC)n|Simple_repeat|Simple_repeat	-55179	NR_038029	433646	Mm.158997	NR_038029	ENSMUSG00000028009	1700061I17Rik	-	RIKEN cDNA 1700061I17 gene	ncRNA
unique_peak2-36170-3-13--2.22133801201688-2.36932189928148	chr2	28935128	28935547	+	0	NA	intron (NM_009442, intron 8 of 11)	RMER6C|LTR|ERVK	19554	NM_009442	22130	Mm.252195	NM_009442	ENSMUSG00000026803	Ttf1	AV245725|TTF-1|TTF-I	transcription termination factor, RNA polymerase I	protein-coding
unique_peak2-34951-0-17--5.01005593191652-4.46429741251234	chr15	90678951	90679737	+	0	NA	Intergenic	Intergenic	49563	NR_033583	20738	Mm.431547	NR_033583		Spn-ps	Cd43-ps	sialophorin, pseudogene	pseudo
unique_peak2-35541-8-18--1.24270509549601-1.15812782348128	chr17	56820047	56820680	+	0	NA	intron (NR_045519, intron 1 of 16)	intron (NR_045519, intron 1 of 16)	7715	NM_027933	71810	Mm.29608	NM_027933	ENSMUSG00000002372	Ranbp3	2610024N24Rik|AA408221	RAN binding protein 3	protein-coding
common_peak1-12831-27-13-1.18419102883763-2.09887956687855	chr18	69922845	69924040	+	0	NA	Intergenic	MLT1B|LTR|MaLR	-161771	NM_201362	381175	Mm.266831	NM_201362	ENSMUSG00000038903	Ccdc68	BC046343	coiled-coil domain containing 68	protein-coding
unique_peak1-363-15-3-2.01216475055566-3.03427613622886	chr1	141441293	141442170	+	0	NA	Intergenic	L1Md_A|LINE|L1	15068	NM_015780	50702	Mm.220362	NM_015780	ENSMUSG00000057037	Cfhr1	AI194696|CFHRB|Cfhl1	complement factor H-related 1	protein-coding
unique_peak1-1450-6-1-1.5653981103803-1.56314192529759	chr12	102704437	102704920	+	0	NA	intron (NM_173023, intron 7 of 26)	L1_Mm|LINE|L1	61795	NM_173023	271036	Mm.84218	NM_173023	ENSMUSG00000047014	Catsperb	4931410B03|4932415G16Rik	catsper channel auxiliary subunit beta	protein-coding
common_peak1-9817-21-7-1.56948926526624-2.44150343356329	chr12	70553889	70554891	+	0	NA	Intergenic	Intergenic	22147	NR_038060	76062	Mm.380755	NR_038060		5830428M24Rik	100040862|Gm3007	RIKEN cDNA 5830428M24 gene	ncRNA
common_peak2-29983-8-7-0.00522241794757061-1.00793137938329	chr6	120927069	120927443	+	0	NA	intron (NM_001270475, intron 20 of 31)	intron (NM_001270475, intron 20 of 31)	-60418	NM_007544	12122	Mm.235081	NM_007544	ENSMUSG00000004446	Bid	2700049M22Rik|AI875481|AU022477	BH3 interacting domain death agonist	protein-coding
common_peak1-17259-8-6-0.197867495889966-1.03789460276074	chr6	134641055	134641405	+	0	NA	intron (NM_026371, intron 3 of 3)	RLTR10-int|LTR|ERVK	50272	NM_026371	67774	Mm.41892	NM_026371	ENSMUSG00000042992	Loh12cr1	5830457J20Rik|AW124643	loss of heterozygosity, 12, chromosomal region 1 homolog (human)	protein-coding
common_peak1-12272-11-7-0.508693584251613-1.21681515183528	chr17	43138519	43139031	+	0	NA	Intergenic	Intergenic	-14729	NM_178589	94185	Mm.200792	NM_178589	ENSMUSG00000023915	Tnfrsf21	AA959878|DR6|R74815|TR7	tumor necrosis factor receptor superfamily, member 21	protein-coding
unique_peak2-37806-5-6--0.511735258063458-0.947717972411649	chr5	123661686	123661959	+	0	NA	Intergenic	MERVL-int|LTR|ERVL	-16377	NM_026000	67151	Mm.278997	NM_026000	ENSMUSG00000029440	Psmd9	1500011J20Rik|2610202L11Rik|Bridge-1|P27	proteasome (prosome, macropain) 26S subunit, non-ATPase, 9	protein-coding
common_peak2-29977-30-21-0.710243790854576-1.16836819221353	chr6	120159017	120159633	+	0	NA	exon (NM_198884, exon 16 of 20)	exon (NM_198884, exon 16 of 20)	85252	NM_198884	330406	Mm.321840	NM_198884	ENSMUSG00000041372	B4galnt3	AB114826|B4GalNAcT3|C330047A21	beta-1,4-N-acetyl-galactosaminyl transferase 3	protein-coding
common_peak2-23317-88-77-0.730010190308284-3.1824201732827	chr15	36842505	36844327	+	0	NA	Intergenic	Intergenic	93741	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
common_peak1-8407-45-52-0.132437570781673-0.372131646957063	chr10	69871824	69873273	+	0	NA	Intergenic	Intergenic	-30868	NM_001143777	71721	Mm.477813	NM_024244	ENSMUSG00000043259	Fam13c	1200015N20Rik|C030038O19Rik|mKIAA1796	family with sequence similarity 13, member C	protein-coding
common_peak1-7558-84-117-0.0522910095271838-0.323745799370708	chr1	39900056	39901794	+	0	NA	non-coding (NR_040465, exon 4 of 5)	non-coding (NR_040465, exon 4 of 5)	3250	NR_040465	73426	Mm.396239	NR_040465		1700066B17Rik	-	RIKEN cDNA 1700066B17 gene	ncRNA
common_peak2-26440-69-86-0.152198951410004-0.444694812276494	chr2	69722189	69723772	+	0	NA	intron (NM_029280, intron 1 of 6)	intron (NM_029280, intron 1 of 6)	692	NM_029280	75422	Mm.10508	NM_029280	ENSMUSG00000051730	Mettl5	2810410A08Rik	methyltransferase like 5	protein-coding
common_peak2-32346-44-49-0.178036644793811-0.432262512709542	chrX	77794986	77795940	+	0	NA	Intergenic	RodERV21-int|LTR|ERV1	-520520	NM_138751	192216	Mm.490421	NM_138751	ENSMUSG00000025666	Tmem47	3010015F07Rik|AI115536|BCMP1|Tm4sf10	transmembrane protein 47	protein-coding
common_peak1-7827-19-11-0.81772482594053-0.991115276827166	chr1	127239390	127240355	+	0	NA	Intergenic	MER5A1|DNA|MER1_type	92432	NM_023735	74117	Mm.183102	NM_023735	ENSMUSG00000026341	Actr3	1200003A09Rik|Arp3	ARP3 actin-related protein 3	protein-coding
common_peak1-15623-47-33-0.847378583516209-2.13991130133362	chr4	133574206	133575520	+	0	NA	promoter-TSS (NM_145833)	promoter-TSS (NM_145833)	-132	NM_145833	83557	Mm.302567	NM_145833	ENSMUSG00000050966	Lin28a	AL024421|ENSMUSG00000070700|Gm10299|Lin-28|Lin28|Tex17|lin-28A	lin-28 homolog A (C. elegans)	protein-coding
common_peak1-15671-9-8-0.0196884049619079-1.03275496310833	chr4	137048269	137048729	+	0	NA	intron (NM_008305, intron 1 of 96)	intron (NM_008305, intron 1 of 96)	23781	NM_008305	15530	Mm.273662	NM_008305	ENSMUSG00000028763	Hspg2	AI852380|Pcn|Plc|per	perlecan (heparan sulfate proteoglycan 2)	protein-coding
unique_peak2-39013-2-4--1.23938235115068-0.931118710592187	chr8	56061930	56062326	+	0	NA	intron (NM_001253756, intron 1 of 5)	intron (NM_001253756, intron 1 of 5)	22047	NM_001253756	234267	Mm.241700	NM_153581	ENSMUSG00000031517	Gpm6a	Gpm6|M6A	glycoprotein m6a	protein-coding
unique_peak2-33277-13-16--0.30899081061257-0.330004445983672	chr11	94371605	94372434	+	0	NA	intron (NM_170671, intron 7 of 18)	intron (NM_170671, intron 7 of 18)	-10731	NM_027984	71889	Mm.248620	NM_027984	ENSMUSG00000010080	Epn3	2310022G12Rik	epsin 3	protein-coding
common_peak2-20012-27-25-0.291106232754144-0.488172498216822	chr1	135313015	135313845	+	0	NA	intron (NM_011439, intron 1 of 13)	intron (NM_011439, intron 1 of 13)	7359	NM_011439	20668	Mm.8575	NM_011439	ENSMUSG00000070643	Sox13	AA407916|AW259412|AW540933|Sox-13	SRY (sex determining region Y)-box 13	protein-coding
unique_peak2-33561-7-12--0.901348887842903-1.31827279259406	chr11	83891673	83892109	+	0	NA	TTS (NM_172562)	TTS (NM_172562)	-10032	NM_019819	56405	Mm.240885	NM_019819	ENSMUSG00000018648	Dusp14	1110014C10Rik|2310042C07Rik|D11Ertd395e|MKP-L|Mkp6	dual specificity phosphatase 14	protein-coding
common_peak1-17567-10-4-1.03448725012141-1.5150158574804	chr7	34969098	34969555	+	0	NA	TTS (NM_026549)	TTS (NM_026549)	12340	NM_026549	68079	Mm.38173	NM_026549	ENSMUSG00000002635	Pdcd2l	6030457N17Rik	programmed cell death 2-like	protein-coding
common_peak2-26588-46-24-1.25413975347408-3.76223442633752	chr2	109406660	109407324	+	0	NA	Intergenic	Intergenic	-107865	NM_007540	12064	Mm.1442	NM_007540	ENSMUSG00000048482	Bdnf	-	brain derived neurotrophic factor	protein-coding
common_peak1-11497-90-79-0.732376931054789-3.32099502010001	chr15	102671401	102673878	+	0	NA	Intergenic	MTD|LTR|MaLR	-78923	NM_010464	15422	Mm.207062	NM_010464	ENSMUSG00000001655	Hoxc13	-	homeobox C13	protein-coding
unique_peak1-419-10-0-3.35641534500877-3.31132995230379	chr1	160548046	160548738	+	0	NA	intron (NM_001205204, intron 16 of 22)	intron (NM_001205204, intron 16 of 22)	112636	NR_030441	735253		NR_030441		Mir488	Mirn488|mmu-mir-488	microRNA 488	ncRNA
common_peak1-11144-25-17-0.691924903902794-0.98872314135509	chr15	73430645	73431673	+	0	NA	intron (NM_001033219, intron 2 of 7)	intron (NM_001033219, intron 2 of 7)	-4203	NM_001168255	106068	Mm.212813	NM_001033219	ENSMUSG00000079020	Slc45a4	9330175B01Rik|AW552276	solute carrier family 45, member 4	protein-coding
common_peak1-17670-8-6-0.197867495889966-1.03789460276074	chr7	65471360	65471878	+	0	NA	Intergenic	Intergenic	-441953	NM_009728	11982	Mm.135129	NM_009728	ENSMUSG00000025324	Atp10a	Atp10c|pfatp	ATPase, class V, type 10A	protein-coding
common_peak2-20285-111-149-0.188875100914288-0.629724416255218	chr1	191717310	191719227	+	0	NA	intron (NM_026796, intron 5 of 11)	intron (NM_026796, intron 5 of 11)	27899	NM_026796	226830	Mm.156895	NM_026796	ENSMUSG00000026603	Smyd2	1110020E07Rik|4930402C15|KMT3C|Zmynd14	SET and MYND domain containing 2	protein-coding
common_peak1-10151-7-15--1.20090916970181-0.947446088118041	chr13	35991160	35991554	+	0	NA	intron (NM_145938, intron 5 of 7)	intron (NM_145938, intron 5 of 7)	6859	NM_145938	208366	Mm.35545	NM_145938		Rpp40	D8Bwg1265e|Rnasep1	ribonuclease P 40 subunit	protein-coding
common_peak2-27894-23-36--0.48768586111987-0.652802052802678	chr4	141278206	141279336	+	0	NA	intron (NM_001017966, intron 1 of 9)	CpG	563	NM_001017966	68817	Mm.393721	NM_001017966		Ddi2	1110056G13Rik|1700027M01Rik|9130022E05Rik|AI604911|AU040698	DNA-damage inducible protein 2	protein-coding
common_peak2-31284-39-40-0.25820924230107-0.498996592876743	chr8	72219495	72220533	+	0	NA	Intergenic	L1Md_F2|LINE|L1	20371	NM_181274	66869	Mm.334581	NM_181274		Zfp869	1200003I07Rik	zinc finger protein 869	protein-coding
common_peak1-16423-20-18-0.240147271147608-0.388034239052786	chr5	130028945	130029822	+	0	NA	intron (NM_172276, intron 7 of 17)	RSINE1|SINE|B4	22277	NM_172276	231769	Mm.288714	NM_172276	ENSMUSG00000029439	Sfswap	1190005N23Rik|6330437E22Rik|AI197402|AW212079|SWAP|Sfrs8|Srsf8	splicing factor, suppressor of white-apricot homolog (Drosophila)	protein-coding
common_peak1-10644-21-50--1.10293607670526-2.32767243258582	chr14	46882990	46883619	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-115895	NR_037981	100041724	Mm.383311	NM_001099324	ENSMUSG00000079261	Gm15217	OTTMUSG00000019524	predicted gene 15217	ncRNA
common_peak1-10044-40-82--0.716063748595826-1.88456604681059	chr13	17694967	17696119	+	0	NA	intron (NM_138654, intron 6 of 13)	RMER19A|LTR|ERVK	91056	NM_138654	192136	Mm.364180	NM_138654		Sugct	5033411D12Rik|D17907	succinyl-CoA glutarate-CoA transferase	protein-coding
common_peak2-28551-45-88--0.615375405621526-1.64919119394264	chr5	4103970	4105572	+	0	NA	promoter-TSS (NM_020010)	promoter-TSS (NM_020010)	-74	NM_020010	13121	Mm.140158	NM_020010	ENSMUSG00000001467	Cyp51	AI426508|CYPLI|Cyp51a1|Ldm|P450-14DM|P450LI	cytochrome P450, family 51	protein-coding
unique_peak1-3941-13-9-0.456543935750406-0.53895475198017	chr2	29100648	29101234	+	0	NA	non-coding (NR_029460, exon 2 of 2)	non-coding (NR_029460, exon 2 of 2)	2619	NM_133501	171171	Mm.442448	NM_133500	ENSMUSG00000035513	Ntng2	2610016D08Rik|Lmnt2	netrin G2	protein-coding
common_peak2-30736-49-29-1.09939322741667-3.23296565093675	chr7	118115283	118116277	+	0	NA	intron (NM_194464, intron 1 of 20)	B4|SINE|B4	10195	NM_194464	17540	Mm.250023	NM_010826	ENSMUSG00000005611	Mrvi1	BB115629|Irag|Ris1	MRV integration site 1	protein-coding
common_peak2-31572-18-17-0.142994149786039-0.353907621462753	chr8	119422041	119422896	+	0	NA	intron (NM_026844, intron 2 of 3)	IAPEz-int|LTR|ERVK	22868	NM_026844	66531	Mm.4011	NM_026844	ENSMUSG00000014633	Cmc2	1110046L09Rik|2310061C15Rik|DC13	COX assembly mitochondrial protein 2	protein-coding
common_peak2-23402-29-26-0.357402578451643-0.590428395010953	chr15	59197302	59198582	+	0	NA	intron (NM_153548, intron 5 of 28)	intron (NM_153548, intron 5 of 28)	7765	NM_153548	223593	Mm.218665	NM_153548	ENSMUSG00000022350	E430025E21Rik	AL022848|C76463|Kiaa0196|mKIAA0196|strumpellin	RIKEN cDNA E430025E21 gene	protein-coding
unique_peak1-5229-9-1-2.18961340640422-2.31132995230379	chr5	39733397	39733917	+	0	NA	Intergenic	Intergenic	261156	NR_045416	75095	Mm.332354	NR_045416		4930513D17Rik	-	RIKEN cDNA 4930513D17 gene	ncRNA
unique_peak2-38375-7-5-0.214128329577033-1.01466476204226	chr7	13010204	13010555	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	-2539	NM_001033820	619331	Mm.361832	NM_001033820	ENSMUSG00000034071	Zfp551	9630004E07Rik|Znf551	zinc fingr protein 551	protein-coding
common_peak1-8447-16-14-0.211373046659543-0.364171515310935	chr10	79684088	79684810	+	0	NA	Intergenic	ID_B1|SINE|B4	-4894	NM_023431	68114	Mm.273418	NM_023431	ENSMUSG00000020156	Mum1	2610019J09|9430059D04Rik|UBE-1C2	melanoma associated antigen (mutated) 1	protein-coding
common_peak2-20933-23-7-1.72176750450908-2.82905316394614	chr11	8468304	8468782	+	0	NA	intron (NM_001083587, intron 4 of 30)	Lx8|LINE|L1	95995	NM_001083587	319939	Mm.337820	NM_001083587	ENSMUSG00000020422	Tns3	BC023928|F830010I22Rik|TEM6|Tens1	tensin 3	protein-coding
unique_peak1-4069-32-15-1.27909201921966-2.70027529094734	chr2	65190361	65191848	+	0	NA	intron (NM_177074, intron 6 of 11)	intron (NM_177074, intron 6 of 11)	10979	NM_177074	320106	Mm.227703	NM_177074	ENSMUSG00000061171	Slc38a11	9330158F14Rik	solute carrier family 38, member 11	protein-coding
unique_peak2-35702-7-20--1.59322659248057-1.71830443967823	chr18	30267070	30267677	+	0	NA	Intergenic	MIRb|SINE|MIR	-165177	NM_181414	225326	Mm.194127	NM_181414	ENSMUSG00000033628	Pik3c3	5330434F23Rik|Vps34	phosphoinositide-3-kinase, class 3	protein-coding
unique_peak2-34005-9-12--0.510826311736872-0.394412252720706	chr12	100200193	100200757	+	0	NA	intron (NM_198311, intron 9 of 14)	intron (NM_198311, intron 9 of 14)	41653	NM_198311	76260	Mm.282660	NM_029553	ENSMUSG00000021013	Ttc8	0610012F22Rik|AV001447|BBS8	tetratricopeptide repeat domain 8	protein-coding
unique_peak2-36891-6-13--1.2419568116773-1.58711810488664	chr3	95732792	95733413	+	0	NA	promoter-TSS (NM_023210)	promoter-TSS (NM_023210)	-78	NM_001253758	66471	Mm.218657	NM_023210	ENSMUSG00000015749	Anp32e	2810018A15Rik|AI047746|AI326868|CPD1|LANP-L|LANPL|mLANP-L	acidic (leucine-rich) nuclear phosphoprotein 32 family, member E	protein-coding
common_peak1-9391-182-186-0.730074075943787-7.10452901901764	chr11	99229677	99231348	+	0	NA	intron (NM_027574, intron 5 of 7)	intron (NM_027574, intron 5 of 7)	5705	NM_027574	70843	Mm.180256	NM_027574	ENSMUSG00000055937	Krt28	4733401L19Rik|Krt25d	keratin 28	protein-coding
common_peak2-30683-25-27-0.0544949832875021-0.316543811862083	chr7	109518425	109519134	+	0	NA	intron (NM_009287, intron 2 of 11)	intron (NM_009287, intron 2 of 11)	-71430	NM_009103	20133	Mm.197486	NM_009103	ENSMUSG00000030978	Rrm1	RnrM1	ribonucleotide reductase M1	protein-coding
common_peak2-26733-8-11--0.579740082773585-1.14218153353838	chr2	131902311	131902968	+	0	NA	intron (NM_018824, intron 7 of 15)	intron (NM_018824, intron 7 of 15)	-46915	NM_175445	215653	Mm.204737	NM_175445	ENSMUSG00000027339	Rassf2	3830431H01Rik|9030412M04Rik|AI852669|AW495050	Ras association (RalGDS/AF-6) domain family member 2	protein-coding
unique_peak2-35113-7-7--0.200909169701811-0.97990265578305	chr16	24491285	24491898	+	0	NA	intron (NM_001145952, intron 2 of 11)	intron (NM_001145952, intron 2 of 11)	-37809	NR_038091	624582	Mm.439775	NR_038091		A730098P11Rik	-	mortality factor 4 like 1 pseudogene	pseudo
common_peak2-21499-17-24--0.425559851569687-0.427564438475253	chr11	89023605	89024308	+	0	NA	Intergenic	Intergenic	88801	NM_001033266	217071	Mm.342127	NM_001033266	ENSMUSG00000072553	Gm525	-	predicted gene 525	protein-coding
common_peak2-25685-15-11-0.4272022498345-0.503257505534083	chr19	12011520	12012063	+	0	NA	exon (NM_172635, exon 15 of 19)	exon (NM_172635, exon 15 of 19)	13573	NR_105960	102465601		NR_105960		Mir6994	mmu-mir-6994	microRNA mir-6994	ncRNA
unique_peak2-39745-8-9--0.316705676939792-1.03275496310833	chrUn_GL456367	23	513	+	0	NA	NA	NA	NA	NA								
common_peak1-12575-28-20-0.660641697042702-1.00055860626307	chr18	11910006	11911010	+	0	NA	Intergenic	MMERVK10C-int|LTR|ERVK	-87275	NM_022021	63955	Mm.40717	NM_022021	ENSMUSG00000040957	Cables1	Cables|ik3-1	CDK5 and Abl enzyme substrate 1	protein-coding
unique_peak2-34350-7-6--0.00826409175941478-0.97990265578305	chr13	100516904	100517371	+	0	NA	Intergenic	RMER1B|Other|Other	153501	NM_013732	27220	Mm.75498	NM_013732	ENSMUSG00000021647	Cartpt	Cart	CART prepropeptide	protein-coding
unique_peak1-2168-11-0-3.50869358425161-3.61235994796777	chr15	61448193	61448868	+	0	NA	Intergenic	Tigger5|DNA|MER2_type	157476	NR_040350	432956	Mm.404918	NR_040350		D030024E09Rik	-	RIKEN cDNA D030024E09 gene	ncRNA
unique_peak2-34275-2-5--1.50241675698448-1.08602067057793	chr13	67609400	67609738	+	0	NA	Intergenic	MTD|LTR|MaLR	-8111	NM_001007575	238693	Mm.478914	NM_001007575	ENSMUSG00000071291	Zfp58	A530094I17Rik|Mfg-1|Mfg1|Rslcan5|Zfp817	zinc finger protein 58	protein-coding
common_peak1-8838-18-13-0.505564229170747-0.625923329873571	chr11	28906411	28907381	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-123855	NM_027869	71701	Mm.211131	NM_027869	ENSMUSG00000020464	Pnpt1	1200003F12Rik|Old35|PNPase|Pnptl1	polyribonucleotide nucleotidyltransferase 1	protein-coding
common_peak2-21459-13-8-0.608547029195456-0.660903317613904	chr11	87026851	87027221	+	0	NA	intron (NM_197987, intron 22 of 23)	intron (NM_197987, intron 22 of 23)	86459	NM_197987	68729	Mm.17436	NM_197987	ENSMUSG00000018548	Trim37	1110032A10Rik|2810004E07Rik|AI848587|AU043018|MUL|TEF3|mKIAA0898	tripartite motif-containing 37	protein-coding
unique_peak2-36712-4-4--0.345388608740609-0.864171920961574	chr3	51739519	51739936	+	0	NA	intron (NM_001004176, intron 1 of 4)	B4|SINE|B4	169201	NM_001004176	433586	Mm.234972	NM_001004176	ENSMUSG00000061143	Maml3	AV234550|BC049812|Mam-2|mKIAA1816	mastermind like 3 (Drosophila)	protein-coding
common_peak2-25642-41-45-0.177586748791647-0.410818340144418	chr19	9954154	9955466	+	0	NA	intron (NM_016692, intron 10 of 17)	intron (NM_016692, intron 10 of 17)	19213	NM_016692	16319	Mm.29755	NM_016692	ENSMUSG00000024660	Incenp	2700067E22Rik|AU019509|C130081E20|C77457	inner centromere protein	protein-coding
common_peak2-32169-74-114--0.129603473965767-0.381367350791263	chr9	110684171	110686947	+	0	NA	Intergenic	B3A|SINE|B2	-15130	NM_153099	235628	Mm.292285	NM_153099	ENSMUSG00000044664	Prss42	Tessp2	protease, serine 42	protein-coding
common_peak2-29070-8-11--0.579740082773585-1.14218153353838	chr5	117388618	117389075	+	0	NA	Intergenic	L1MA4|LINE|L1	177156	NM_001122666	71954	Mm.34456	NM_178622	ENSMUSG00000066900	Suds3	2400003N08Rik|2410008L21Rik|AU067672|mSds3	suppressor of defective silencing 3 homolog (S. cerevisiae)	protein-coding
common_peak2-29124-45-42-0.434093270642774-0.859323385424281	chr5	124046644	124047892	+	0	NA	intron (NM_019765, intron 18 of 23)	intron (NM_019765, intron 18 of 23)	-24244	NM_029929	77573	Mm.41372	NM_029929	ENSMUSG00000029434	Vps33a	3830421M04Rik|AI503300|AW048546|AW554476|bf	vacuolar protein sorting 33A (yeast)	protein-coding
unique_peak2-37742-0-4--3.16205902536157-1.10720996964787	chr5	110286379	110286809	+	0	NA	Intergenic	Kanga2_a|DNA|Tc2	-23433	NR_027964	667213	Mm.454429	NR_027964		Gm10416	EG667213|ENSMUSG00000072761	zinc finger protein pseudogene	pseudo
common_peak2-22921-12-12--0.0516637330534535-0.309718203022949	chr14	46276736	46277425	+	0	NA	TTS (NR_039593)	TTS (NR_039593)	648	NR_039593	100628600		NR_039593		Mir5131	mmu-mir-5131|mu-mir-5131	microRNA 5131	ncRNA
unique_peak1-6795-10-4-1.03448725012141-1.5150158574804	chr8	69939734	69940252	+	0	NA	Intergenic	Intergenic	-74664	NM_008673	17960	Mm.14125	NM_008673	ENSMUSG00000025588	Nat1	Nat-1	N-acetyl transferase 1	protein-coding
common_peak1-8797-30-44--0.322177686837802-0.475038482441584	chr11	19924198	19925156	+	0	NA	Intergenic	Intergenic	88277	NM_146243	66713	Mm.259045	NM_146243	ENSMUSG00000020152	Actr2	4921510D23Rik|AA409782|Arp2|D6Ertd746e	ARP2 actin-related protein 2	protein-coding
common_peak2-22870-15-11-0.4272022498345-0.503257505534083	chr14	30548577	30549059	+	0	NA	Intergenic	RMER1C|Other|Other	-13768	NM_009785	12294	Mm.386754	NM_009785	ENSMUSG00000021991	Cacna2d3	Cacnad3	calcium channel, voltage-dependent, alpha2/delta subunit 3	protein-coding
unique_peak2-38589-5-8--0.874305337448166-1.10484139239135	chr7	70365651	70366035	+	0	NA	Intergenic	Intergenic	-8431	NM_007390	11441	Mm.113464	NM_007390	ENSMUSG00000030525	Chrna7	Acra7|alpha7	cholinergic receptor, nicotinic, alpha polypeptide 7	protein-coding
unique_peak1-7024-8-0-3.00522241794757-2.70926996097583	chr8	126610407	126610906	+	0	NA	Intergenic	RMER13A|LTR|ERVK	63283	NM_001029876	382038	Mm.334891	NM_001029876	ENSMUSG00000031976	Urb2	C77575|mKIAA0133	URB2 ribosome biogenesis 2 homolog (S. cerevisiae)	protein-coding
unique_peak1-939-18-7-1.31291915122835-1.71830443967823	chr11	54068130	54069102	+	0	NA	Intergenic	Intergenic	-5215	NM_009969	12981	Mm.4922	NM_009969		Csf2	Csfgm|GMCSF|Gm-CSf|MGI-IGM	colony stimulating factor 2 (granulocyte-macrophage)	protein-coding
unique_peak1-2678-20-0-4.48807478459119-NA	chr16	58543112	58543977	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-20119	NM_018784	54613	Mm.212742	NM_018784	ENSMUSG00000022747	St3gal6	1700023B24Rik|AI930218|AW552396|Siat10|St3galVI	ST3 beta-galactoside alpha-2,3-sialyltransferase 6	protein-coding
common_peak2-28536-86-89-0.483782697702678-1.69060945777504	chr5	146832473	146833768	+	0	NA	Intergenic	Intergenic	-11926	NR_030782	56388	Mm.301900	NM_019792	ENSMUSG00000029630	Cyp3a25	AI327008	cytochrome P450, family 3, subfamily a, polypeptide 25	protein-coding
common_peak1-18586-10-22--1.16714661104824-1.30248952876293	chr8	106210998	106211510	+	0	NA	Intergenic	Intergenic	83555	NR_045730	71058	Mm.67707	NR_045730		4933400L20Rik	-	RIKEN cDNA 4933400L20 gene	ncRNA
unique_peak1-6606-10-1-2.35641534500877-2.57096726280955	chr8	90881529	90882067	+	0	NA	intron (NM_012047, intron 3 of 16)	intron (NM_012047, intron 3 of 16)	4292	NM_012047	26992	Mm.5400	NM_012047		Brd7	BP75|CELTIX1|Ptpn13ip	bromodomain containing 7	protein-coding
common_peak1-17534-14-9-0.577288065470282-0.630231561310125	chr7	28865166	28865876	+	0	NA	intron (NM_001122603, intron 3 of 19)	L1Md_F2|LINE|L1	9266	NM_001122603	215384	Mm.292276	NM_175444	ENSMUSG00000047730	Fcgbp	A430096B05Rik	Fc fragment of IgG binding protein	protein-coding
unique_peak2-34300-19-41--0.989630096117074-1.72734829286054	chr13	77134786	77135866	+	0	NA	intron (NM_030174, intron 17 of 20)	RLTR6-int|LTR|ERV1	139403	NM_134071	105377	Mm.209730	NM_134071	ENSMUSG00000021597	Ankrd32	2700017A04Rik|AW545819|Brctd1|Brctx|C730024G01Rik	ankyrin repeat domain 32	protein-coding
unique_peak2-39978-7-24--1.84476535947653-2.44150343356329	chrX	152768448	152769820	+	0	NA	Intergenic	Intergenic	-204892	NR_033598	74941	Mm.484588	NR_033598		4930503H13Rik	-	gem (nuclear organelle) associated protein 8 pseudogene	pseudo
common_peak1-10392-10-7-0.356415345008769-1.12966497611638	chr13	96680429	96681037	+	0	NA	Intergenic	Intergenic	-18856	NM_027711	544963	Mm.38878	NM_027711	ENSMUSG00000021676	Iqgap2	4933417J23Rik|A630053O10|AI788777	IQ motif containing GTPase activating protein 2	protein-coding
unique_peak1-6740-16-3-2.11826364226806-2.65002542325363	chr8	46640951	46641653	+	0	NA	intron (NM_172752, intron 1 of 22)	intron (NM_172752, intron 1 of 22)	48160	NM_001205219	234214	Mm.211096	NM_172752	ENSMUSG00000031626	Sorbs2	2010203O03Rik|9430041O17Rik|A530071H08|Argbp2|mKIAA0777	sorbin and SH3 domain containing 2	protein-coding
common_peak1-13873-36-72--0.710503472712263-1.66629652699066	chr2	71625701	71627285	+	0	NA	intron (NM_001277970, intron 1 of 24)	intron (NM_001277970, intron 1 of 24)	1497	NM_001277970	16403	Mm.225096	NM_008397		Itga6	5033401O05Rik|AI115430|Cd49f|VLA-6	integrin alpha 6	protein-coding
common_peak1-7812-10-7-0.356415345008769-1.12966497611638	chr1	121327935	121328427	+	0	NA	Intergenic	Intergenic	-9356	NM_008381	16324	Mm.3092	NM_008381	ENSMUSG00000037035	Inhbb	-	inhibin beta-B	protein-coding
common_peak1-9302-8-14--0.901668177660948-0.660903317613906	chr11	93955405	93955902	+	0	NA	intron (NM_001025430, intron 15 of 25)	B1_Mur4|SINE|Alu	50134	NM_001025429	70834	Mm.260737	NM_027569	ENSMUSG00000020859	Spag9	3110018C07Rik|4733401I23Rik|4831406C20Rik|AW552012|JLP|JSAP2|JSAP2a|Jip4|Mapk8ip4|syd1	sperm associated antigen 9	protein-coding
common_peak2-30628-22-30--0.30691220529947-0.399869693390336	chr7	96951457	96952104	+	0	NA	intron (NM_181407, intron 5 of 13)	MIR|SINE|MIR	100359	NM_001162979	70884	Mm.252823	NM_001162979	ENSMUSG00000039391	Ccdc81	4921513D09Rik	coiled-coil domain containing 81	protein-coding
common_peak2-27315-27-39--0.330382143992127-0.451135909022758	chr3	65528487	65529592	+	0	NA	intron (NM_001166659, intron 3 of 12)	intron (NM_001166659, intron 3 of 12)	58889	NM_001166659	624866	Mm.296317	NM_001037923	ENSMUSG00000074579	Lekr1	EG546798|EG624866|Gm6534	leucine, glutamate and lysine rich 1	protein-coding
common_peak1-11111-8-10--0.454209200689727-1.078512453669	chr15	62120719	62121243	+	0	NA	Intergenic	Intergenic	-69975	NR_003523	67552	Mm.484027	NM_026230		H2afy3	4933432H23Rik	H2A histone family, member Y3	pseudo
common_peak2-20492-20-22--0.03548717146582-0.301029995663994	chr10	57486438	57487177	+	0	NA	Intergenic	L1Md_T|LINE|L1	-17922	NM_021272	12140	Mm.3644	NM_021272	ENSMUSG00000019874	Fabp7	B-FABP|BFABP|Blbp|MRG	fatty acid binding protein 7, brain	protein-coding
common_peak2-22594-40-28-0.800994687623526-1.77636329975051	chr13	72639235	72640463	+	0	NA	Intergenic	Intergenic	126163	NR_030701	328287	Mm.235072	NR_030701		Gm20554	D430050G20	predicted gene, 20554	ncRNA
unique_peak2-37409-0-5--3.42509343119537-1.32905871926422	chr4	145640729	145640967	+	0	NA	Intergenic	B4A|SINE|B4	-10318	NR_045468	67524	Mm.444300	NR_045468	ENSMUSG00000086046	1700095A21Rik	-	RIKEN cDNA 1700095A21 gene	ncRNA
common_peak2-21674-11-6-0.701338662194009-1.32595962126035	chr11	103381217	103381631	+	0	NA	Intergenic	B3|SINE|B2	94629	NM_001033434	380730	Mm.380214	NM_001033434	ENSMUSG00000034239	Gm884	LRRC37	predicted gene 884	protein-coding
common_peak1-16170-9-17--0.980311595038092-0.844317084070804	chr5	88886866	88887392	+	0	NA	intron (NM_009664, intron 2 of 10)	intron (NM_009664, intron 2 of 10)	2093	NM_009664	11698	Mm.8437	NM_009664	ENSMUSG00000029288	Ambn	-	ameloblastin	protein-coding
unique_peak2-34274-10-14--0.550475250599749-0.446472590016315	chr13	67525590	67526110	+	0	NA	Intergenic	RMER5|LTR|ERV1	-3496	NM_177811	328274	Mm.222470	NM_177811	ENSMUSG00000055560	Zfp459	9930025G17Rik|Rslcan-14	zinc finger protein 459	protein-coding
common_peak1-19053-33-67--0.75612527872481-1.79658675346641	chr9	66591816	66593155	+	0	NA	intron (NM_178396, intron 2 of 10)	intron (NM_178396, intron 2 of 10)	30992	NM_178396	76459	Mm.277921	NM_178396	ENSMUSG00000032373	Car12	2310047E01Rik|AI314958|Ca12	carbonic anyhydrase 12	protein-coding
common_peak2-25403-150-172-0.505960855432365-3.16081161677287	chr19	12794757	12797003	+	0	NA	Intergenic	Lx3_Mus|LINE|L1	25600	NM_029550	64697	Mm.218561	NM_029550	ENSMUSG00000024694	Keg1	0610008P16Rik|AI316519|GS4059	kidney expressed gene 1	protein-coding
common_peak1-8584-13-15--0.221527969362231-0.308519316180257	chr10	99243935	99244608	+	0	NA	Intergenic	Intergenic	-21979	NM_027945	71832	Mm.483162	NM_027945	ENSMUSG00000046934	Csl	1700007H16Rik	citrate synthase like	protein-coding
common_peak1-18707-18-21--0.146512467408946-0.306326795069975	chr8	122475181	122476198	+	0	NA	intron (NM_009462, intron 9 of 13)	RSINE1|SINE|B4	-40681	NM_030209	78892	Mm.264680	NM_030209	ENSMUSG00000031825	Crispld2	1810049K24Rik|Lcrisp2|Lgl1|coffeecrisp	cysteine-rich secretory protein LCCL domain containing 2	protein-coding
common_peak1-10864-20-13-0.680719862533589-0.809260849721102	chr15	89128437	89129313	+	0	NA	intron (NM_001170561, intron 28 of 40)	intron (NM_001170561, intron 28 of 40)	7288	NR_105924	102465981		NR_105924		Mir6959	mmu-mir-6959	microRNA mir-6959	ncRNA
common_peak2-28046-71-47-1.05948167799882-4.54539047326609	chr4	57956470	57957502	+	0	NA	intron (NM_011660, intron 4 of 4)	intron (NM_011660, intron 4 of 4)	12297	NM_011660	22166	Mm.260618	NM_011660	ENSMUSG00000028367	Txn1	ADF|AW550880|Trx1|Txn	thioredoxin 1	protein-coding
common_peak2-25958-29-30-0.158093770228236-0.384630725886669	chr19	47869667	47870350	+	0	NA	intron (NM_027559, intron 11 of 37)	intron (NM_027559, intron 11 of 37)	41843	NM_027559	100048534	Mm.29457	NM_027559	ENSMUSG00000044948	Cfap43	4632415N18Rik|4930428C11Rik|4930463G05Rik|AI429486|D19Ertd652e|Wdr96	cilia and flagella associated protein 43	protein-coding
common_peak2-20832-39-44-0.123908150589479-0.359431063687663	chr11	59505633	59506929	+	0	NA	intron (NM_012027, intron 1 of 23)	Lx9|LINE|L1	30284	NM_012027	26936	Mm.2402	NM_012027	ENSMUSG00000005417	Mprip	9530046C02|AA536749|AI647711|C76423|RIP3|Rhoip3|mKIAA0864|p116Rip	myosin phosphatase Rho interacting protein	protein-coding
common_peak2-28904-7-12--0.901348887842903-1.31827279259406	chr5	91661893	91662444	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	49934	NR_040428	100503265	Mm.125059	NR_040428		Gm19619	-	predicted gene, 19619	ncRNA
common_peak2-26704-12-5-1.06381348436648-1.78669045979184	chr2	128240478	128240835	+	0	NA	intron (NR_028591, intron 1 of 1)	intron (NR_028591, intron 1 of 1)	14431	NR_028591	100043424	Mm.297222	NR_028589		Gm14005	OTTMUSG00000015351	predicted gene 14005	ncRNA
common_peak2-21214-43-80--0.557286817360922-1.31216754501451	chr11	61854181	61855703	+	0	NA	intron (NM_001281818, intron 2 of 14)	L1Md_A|LINE|L1	-35584	NM_001029936	432572	Mm.458025	NM_001029936	ENSMUSG00000042331	Specc1	2810012G08Rik|B230396K10Rik|Cytsb	sperm antigen with calponin homology and coiled-coil domains 1	protein-coding
unique_peak2-34464-6-8--0.60452689106201-1.03789460276074	chr14	31386234	31386766	+	0	NA	intron (NM_009388, intron 13 of 13)	intron (NM_009388, intron 13 of 13)	1165	NR_037237	100526475		NR_037237		Mir3076	mmu-mir-3076	microRNA 3076	ncRNA
common_peak1-12192-110-197--0.227358859700965-0.766630787871648	chr17	32283650	32285212	+	0	NA	intron (NM_008716, intron 17 of 32)	intron (NM_008716, intron 17 of 32)	19366	NM_008716	18131	Mm.439741	NM_008716	ENSMUSG00000038146	Notch3	AW229011|N3|hpbk	notch 3	protein-coding
common_peak2-29800-12-8-0.478850983645327-0.562038191119709	chr6	91015444	91016009	+	0	NA	intron (NM_018815, intron 13 of 39)	intron (NM_018815, intron 13 of 39)	51094	NM_018815	54563	Mm.28162	NM_018815	ENSMUSG00000030091	Nup210	9830001L10|AI836801|Pom210|gp190|gp210	nucleoporin 210	protein-coding
unique_peak1-4052-25-5-2.27688740462395-4.37015862955249	chr2	60288889	60289922	+	0	NA	intron (NM_008867, intron 14 of 29)	intron (NM_008867, intron 14 of 29)	39823	NR_046065	100039176	Mm.261790	NR_046065	ENSMUSG00000087283	Gm13580	OTTMUSG00000012842	predicted gene 13580	ncRNA
common_peak1-18563-59-100--0.332847481879217-0.784577255940941	chr8	105170404	105171897	+	0	NA	intron (NM_009866, intron 11 of 12)	intron (NM_009866, intron 11 of 12)	137861	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
common_peak1-14230-28-10-1.59352750118417-3.11713623526325	chr2	152757797	152759127	+	0	NA	exon (NM_010226, exon 1 of 1)	exon (NM_010226, exon 1 of 1)	482	NM_010226	14239	Mm.205798	NM_010226	ENSMUSG00000074676	Foxs1	FREAC10|Fkh3|Fkhl18	forkhead box S1	protein-coding
unique_peak1-955-13-4-1.45654393575041-2.23384849113406	chr11	59810944	59811488	+	0	NA	intron (NM_001290012, intron 2 of 6)	intron (NM_001290012, intron 2 of 6)	-32772	NM_009026	19416	Mm.3903	NM_009026	ENSMUSG00000049892	Rasd1	Dexras1	RAS, dexamethasone-induced 1	protein-coding
unique_peak2-37075-4-5--0.608423014574403-0.909929411522249	chr3	148916029	148916412	+	0	NA	Intergenic	Intergenic	-21481	NR_040591	381482	Mm.393866	NR_040591		Gm1653	-	predicted gene 1653	ncRNA
unique_peak1-5307-19-9-1.08075923177432-1.37307999835977	chr5	75825584	75826551	+	0	NA	Intergenic	ORR1E|LTR|MaLR	-144945	NM_001122733	16590	Mm.247073	NM_021099	ENSMUSG00000005672	Kit	Bs|CD117|Fdc|Gsfsco1|Gsfsco5|Gsfsow3|SCO1|SCO5|SOW3|Ssm|Tr-kit|W|c-KIT	kit oncogene	protein-coding
common_peak2-26290-16-19--0.203664452619301-0.325169893479371	chr2	31245829	31246496	+	0	NA	Intergenic	(TGGA)n|Simple_repeat|Simple_repeat	-79628	NM_007494	11898	Mm.3217	NM_007494	ENSMUSG00000076441	Ass1	AA408052|ASS|Ass-1|fold	argininosuccinate synthetase 1	protein-coding
common_peak2-20050-20-21-0.0286431659538957-0.306080386793804	chr1	150098053	150099152	+	0	NA	Intergenic	L1_Mus3|LINE|L1	1709812	NM_008869	18783	Mm.4186	NM_008869	ENSMUSG00000056220	Pla2g4a	Pla2g4|cPLA2|cPLA2alpha	phospholipase A2, group IVA (cytosolic, calcium-dependent)	protein-coding
unique_peak2-35434-6-9--0.75652998450706-1.11707584880836	chr17	34940718	34941308	+	0	NA	exon (NM_009995, exon 2 of 10)	exon (NM_009995, exon 2 of 10)	358	NM_009995	13079	Mm.440407	NM_009995	ENSMUSG00000024365	Cyp21a1	21-OH|21OH|21OHA|21OHB|CYP21OH-A|Cyp21|Cyp21-ps1|Cyp21B|Cyp21a2-ps|Cyp21a2ps|Oh21-1|Oh21-2	cytochrome P450, family 21, subfamily a, polypeptide 1	protein-coding
common_peak1-14616-29-38--0.173112138247138-0.327809114039775	chr3	52197957	52199261	+	0	NA	Intergenic	Intergenic	126350	NM_019739	56458	Mm.29891	NM_019739	ENSMUSG00000044167	Foxo1	AI876417|Afxh|FKHR|Fkhr1|Foxo1a	forkhead box O1	protein-coding
unique_peak2-35261-7-20--1.59322659248057-1.71830443967823	chr17	44105128	44105822	+	0	NA	intron (NM_001286654, intron 2 of 4)	intron (NM_001286654, intron 2 of 4)	15335	NM_030598	53901	Mm.251242	NM_030598	ENSMUSG00000039601	Rcan2	Csp2|Dscr1l1|MCIP2|ZAKI-4	regulator of calcineurin 2	protein-coding
unique_peak1-70-7-6--0.00826409175941478-0.97990265578305	chr1	36326490	36327018	+	0	NA	intron (NM_153408, intron 1 of 3)	intron (NM_153408, intron 1 of 3)	3516	NM_153408	214854	Mm.389110	NM_153408	ENSMUSG00000047180	Neurl3	2010300P06Rik|Lincr	neuralized homolog 3 homolog (Drosophila)	protein-coding
unique_peak2-35950-8-6-0.197867495889966-1.03789460276074	chr19	10555233	10555709	+	0	NA	intron (NM_133689, intron 4 of 13)	intron (NM_133689, intron 4 of 13)	1916	NM_133689	67752	Mm.25939	NM_133689	ENSMUSG00000035179	Ppp1r32	4930579J09Rik|AU015816|IIIG9|IIIG9L|IIIG9S	protein phosphatase 1, regulatory subunit 32	protein-coding
common_peak2-26535-11-7-0.508693584251613-1.21681515183528	chr2	92047547	92047952	+	0	NA	intron (NM_001109691, intron 2 of 18)	intron (NM_001109691, intron 2 of 18)	-13970	NM_001109690	192285	Mm.330408	NM_138755	ENSMUSG00000058318	Phf21a	80kDa|Bhc|Bhc80|D030065N23Rik|PFTF1	PHD finger protein 21A	protein-coding
unique_peak2-32746-4-5--0.608423014574403-0.909929411522249	chr1	167283753	167284189	+	0	NA	intron (NM_028759, intron 11 of 18)	B3|SINE|B2	58074	NM_001081126	240888	Mm.329929	NM_001081126		Gpr161	Gm208|Gm208Gpr|vl	G protein-coupled receptor 161	protein-coding
common_peak2-31565-29-28-0.254309085487539-0.470271536760928	chr8	117801174	117802058	+	0	NA	intron (NM_019573, intron 8 of 8)	intron (NM_019573, intron 8 of 8)	429178	NM_001025577	17132	Mm.275549	NM_001025577		Maf	2810401A20Rik|A230108G15Rik|AW047063|c-maf	avian musculoaponeurotic fibrosarcoma (v-maf) AS42 oncogene homolog	protein-coding
unique_peak1-128-15-6-1.20480982849805-1.32521814697968	chr1	64600763	64601437	+	0	NA	intron (NM_133828, intron 2 of 7)	Lx8|LINE|L1	21722	NM_001037726	12912	Mm.422634	NM_009952	ENSMUSG00000025958	Creb1	2310001E10Rik|3526402H21Rik|AV083133|Creb|Creb-1	cAMP responsive element binding protein 1	protein-coding
common_peak2-30346-6-8--0.60452689106201-1.03789460276074	chr7	27195428	27195858	+	0	NA	Intergenic	ETnERV-int|LTR|ERVK	-16381	NM_001042612	330490	Mm.212174	NM_194062	ENSMUSG00000040614	Nlrp9c	AA636537|BB062542|Nalp-zeta|Nalp9c	NLR family, pyrin domain containing 9C	protein-coding
unique_peak1-5861-8-3-1.00522241794757-1.39487600375387	chr6	84293839	84294394	+	0	NA	Intergenic	Intergenic	79716	NR_046063	100038556	Mm.387783	NR_046063		Gm10445	ENSMUSG00000072956	predicted gene 10445	ncRNA
common_peak2-24545-7-8--0.370834171144123-1.00793137938329	chr17	27840001	27840458	+	0	NA	intron (NM_001286743, intron 3 of 9)	ID_B1|SINE|B4	18045	NM_178365	23969	Mm.4926	NM_011861	ENSMUSG00000040276	Pacsin1	A830061D09Rik|H74|mKIAA1379|syndapin	protein kinase C and casein kinase substrate in neurons 1	protein-coding
common_peak1-9126-13-16--0.30899081061257-0.330004445983672	chr11	75402976	75403548	+	0	NA	intron (NM_008850, intron 1 of 10)	intron (NM_008850, intron 1 of 10)	1652	NM_008850	18738	Mm.3128	NM_008850	ENSMUSG00000017781	Pitpna	Pitpn|vb|vibrator	phosphatidylinositol transfer protein, alpha	protein-coding
common_peak1-7446-40-54--0.122384030773562-0.319645149473555	chr1	64798296	64799894	+	0	NA	Intergenic	Intergenic	-14771	NM_022721	14367	Mm.150813	NM_022721	ENSMUSG00000045005	Fzd5	5330434N09Rik|AI427138|Fz-5|Fz5|mFz5	frizzled homolog 5 (Drosophila)	protein-coding
common_peak1-16121-66-50-0.846058322454346-3.03932481014731	chr5	66165165	66167965	+	0	NA	intron (NM_001024917, intron 2 of 19)	intron (NM_001024917, intron 2 of 19)	11805	NM_001024917	333789	Mm.332398	NM_001024917	ENSMUSG00000037795	N4bp2	B3bp|E430014I16|Gm1791|Gm868	NEDD4 binding protein 2	protein-coding
common_peak1-17990-12-10-0.189344366450341-0.386243247519795	chr7	139212700	139213268	+	0	NA	Intergenic	MLT1K|LTR|MaLR	54841	NM_173410	233919	Mm.208740	NM_173410		Gpr26	9630036A11Rik|A730021D22	G protein-coupled receptor 26	protein-coding
common_peak1-14117-25-14-0.954959309736587-1.46151065785802	chr2	128470057	128471205	+	0	NA	intron (NM_008569, intron 27 of 47)	MTEa|LTR|MaLR	42500	NM_008569	17222	Mm.277408	NM_008569	ENSMUSG00000014355	Anapc1	2610021O03Rik|AI047775|AI853536|AW547281|Apc1|Mcpr|tsg24	anaphase promoting complex subunit 1	protein-coding
unique_peak2-36313-4-11--1.6084230145744-1.68134727924692	chr2	77268012	77268467	+	0	NA	intron (NM_178723, intron 6 of 9)	Lx7|LINE|L1	-32462	NR_040368	100503106	Mm.443215	NR_040368	ENSMUSG00000085845	Gm13944	OTTMUSG00000015155	predicted gene 13944	ncRNA
unique_peak1-240-8-0-3.00522241794757-2.70926996097583	chr1	90601859	90602437	+	0	NA	Intergenic	Intergenic	-3382	NM_177305	320982	Mm.27968	NM_177305	ENSMUSG00000049866	Arl4c	A630084M22Rik|Arl7|LAK	ADP-ribosylation factor-like 4C	protein-coding
common_peak2-23723-62-81-0.0531994541840008-0.321961876121209	chr15	93397706	93399015	+	0	NA	intron (NM_001033217, intron 1 of 7)	intron (NM_001033217, intron 1 of 7)	27962	NM_001033217	106042	Mm.150314	NM_001033217	ENSMUSG00000036158	Prickle1	1110058P22Rik|AW215793|Prickle|b2b019Clo|mpk1	prickle homolog 1 (Drosophila)	protein-coding
unique_peak2-35957-8-9--0.316705676939792-1.03275496310833	chr19	15984584	15984967	+	0	NA	intron (NM_001205339, intron 6 of 8)	intron (NM_001205339, intron 6 of 8)	14337	NM_001205339	107272	Mm.289936	NM_177420	ENSMUSG00000024640	Psat1	D8Ertd814e|EPIP|PSA|Psat	phosphoserine aminotransferase 1	protein-coding
unique_peak1-1363-9-3-1.18961340640422-1.57096726280955	chr12	31075214	31075773	+	0	NA	Intergenic	L1M5|LINE|L1	-17253	NM_172951	268534	Mm.279765	NM_172951	ENSMUSG00000020672	Sntg2	2210008K22Rik|9530013L23|BB121248	syntrophin, gamma 2	protein-coding
common_peak1-7950-20-24--0.155781405183531-0.319918318021793	chr1	153185664	153186453	+	0	NA	Intergenic	Intergenic	-5570	NM_001039512	117198	Mm.33764	NM_028582	ENSMUSG00000023150	Ivns1abp	1190004M08Rik|1700126I16Rik|AA960440|HSPC068|ND1|NS-1|NS1-BP|Nd1-L|Nd1-S|mKIAA0850	influenza virus NS1A binding protein	protein-coding
common_peak1-10130-22-15-0.647284105087405-0.849699271740893	chr13	32938939	32940052	+	0	NA	intron (NM_025429, intron 3 of 6)	intron (NM_025429, intron 3 of 6)	3559	NM_025429	66222	Mm.20144	NM_025429	ENSMUSG00000044734	Serpinb1a	1190005M04Rik|AI325983|EI|EIA|ELANH2|LEI|M/NEI|MNEI|PI2	serine (or cysteine) peptidase inhibitor, clade B, member 1a	protein-coding
common_peak2-21176-141-168-0.432161400350681-2.28271909814618	chr11	59809270	59810526	+	0	NA	intron (NM_001290012, intron 2 of 6)	intron (NM_001290012, intron 2 of 6)	-31454	NM_009026	19416	Mm.3903	NM_009026	ENSMUSG00000049892	Rasd1	Dexras1	RAS, dexamethasone-induced 1	protein-coding
unique_peak2-38106-6-15--1.4346018896197-1.16633110333236	chr6	71831339	71831807	+	0	NA	exon (NM_027275, exon 23 of 24)	exon (NM_027275, exon 23 of 24)	27183	NM_027275	69956	Mm.30256	NM_027275	ENSMUSG00000063884	Ptcd3	2610034F17Rik|2810422B04Rik|AA589622|AU045708|MRP-S39	pentatricopeptide repeat domain 3	protein-coding
unique_peak2-34007-4-7--1.02346051385325-1.09384600808989	chr12	101979807	101980263	+	0	NA	Intergenic	Intergenic	-16797	NM_153587	73086	Mm.220417	NM_153587	ENSMUSG00000021180	Rps6ka5	3110005L17Rik|6330404E13Rik|AI854034|MSK1|MSPK1|RLPK	ribosomal protein S6 kinase, polypeptide 5	protein-coding
common_peak2-23040-11-11--0.0762689164695427-0.301029995663976	chr14	69267057	69267766	+	0	NA	intron (NR_102399, intron 2 of 21)	intron (NR_102399, intron 2 of 21)	6488	NM_010082	13522	Mm.117450	NM_010082	ENSMUSG00000014725	Adam28	C130072N01Rik|D430033C21Rik|Dtgn1|MDC-L|MDC-Lm|MDC-Ls|MDCL|TECADAM|eMDCII	a disintegrin and metallopeptidase domain 28	protein-coding
common_peak2-29226-30-34-0.0403923925469067-0.31344009820369	chr5	138155090	138155903	+	0	NA	Intergenic	PB1D10|SINE|Alu	25730	NM_175521	243300	Mm.74750	NM_175521	ENSMUSG00000045348	Nyap1	6430598A04Rik	neuronal tyrosine-phosphorylated phosphoinositide 3-kinase adaptor 1	protein-coding
common_peak2-21530-12-9-0.326847890200276-0.459837087125828	chr11	95105089	95105525	+	0	NA	Intergenic	Intergenic	-17536	NM_053093	93670	Mm.40085	NM_053093	ENSMUSG00000020872	Tac4	AW489379|PPT-C	tachykinin 4	protein-coding
unique_peak2-39562-6-9--0.75652998450706-1.11707584880836	chr9	70847405	70847852	+	0	NA	Intergenic	Intergenic	-65013	NM_008280	15450	Mm.390187	NM_008280	ENSMUSG00000032207	Lipc	AI256194|HL|Hpl	lipase, hepatic	protein-coding
unique_peak1-6161-26-10-1.46846747352116-2.57346781069461	chr6	140465799	140466734	+	0	NA	intron (NM_144920, intron 3 of 30)	intron (NM_144920, intron 3 of 30)	93646	NM_144920	109135	Mm.247670	NM_144920	ENSMUSG00000030231	Plekha5	2810431N21Rik|AI428202|AK129423|AMH-Cre|Ayu21-9|Gt(pU21)9Imeg|Pepp2|Tg(AMH-cre)1Flor	pleckstrin homology domain containing, family A member 5	protein-coding
unique_peak2-37977-5-7--0.704380336005853-1.01466476204226	chr6	3288408	3288921	+	0	NA	Intergenic	IAPEY3-int|LTR|ERVK	50145	NR_036696	667335	Mm.380219	NR_036696		Gm8579	EG667335	spermatogenesis associated glutamate (E)-rich protein 4a pseudogene	pseudo
common_peak1-9655-28-28-0.194978124693891-0.390124689062469	chr12	102743297	102744548	+	0	NA	intron (NM_173023, intron 10 of 26)	L1Md_F2|LINE|L1	101039	NM_173023	271036	Mm.84218	NM_173023	ENSMUSG00000047014	Catsperb	4931410B03|4932415G16Rik	catsper channel auxiliary subunit beta	protein-coding
common_peak1-10464-20-20-0.0957573618124323-0.321718508207528	chr13	109902646	109903390	+	0	NA	intron (NM_011056, intron 3 of 16)	intron (NM_011056, intron 3 of 16)	-211920	NR_030644	100124489		NR_030644		Mir582	Mirn582|mmu-mir-582	microRNA 582	ncRNA
common_peak1-8963-8-11--0.579740082773585-1.14218153353838	chr11	57674241	57674721	+	0	NA	Intergenic	Intergenic	-28832	NM_008213	15110	Mm.4746	NM_008213	ENSMUSG00000037335	Hand1	Ehand1|Hxt|Th1|Thing1|bHLHa27|eHAND	heart and neural crest derivatives expressed transcript 1	protein-coding
common_peak2-28379-8-18--1.24270509549601-1.15812782348128	chr4	138434677	138435230	+	0	NA	intron (NM_012044, intron 1 of 4)	intron (NM_012044, intron 1 of 4)	1096	NM_012044	26970	Mm.296007	NM_012044	ENSMUSG00000028751	Pla2g2e	-	phospholipase A2, group IIE	protein-coding
common_peak2-29391-10-11--0.228547155712387-0.31137425193576	chr6	71270332	71270835	+	0	NA	Intergenic	(TAAA)n|Simple_repeat|Simple_repeat	-2223	NM_009858	12526	Mm.333148	NM_009858	ENSMUSG00000053044	Cd8b1	Cd8b|Ly-3|Ly-C|Lyt-3	CD8 antigen, beta chain 1	protein-coding
unique_peak1-6661-9-3-1.18961340640422-1.57096726280955	chr8	15004880	15005395	+	0	NA	Intergenic	Intergenic	-5888	NM_029116	74901	Mm.46675	NM_029116	ENSMUSG00000055675	Kbtbd11	2900016B01Rik|4930465M17Rik|mKIAA0711	kelch repeat and BTB (POZ) domain containing 11	protein-coding
common_peak2-30955-14-17--0.270708841084668-0.328191099940267	chr8	78741436	78741991	+	0	NA	Intergenic	Intergenic	682359	NR_028579	100039211	Mm.367571	NR_028579	ENSMUSG00000074235	Gm10649	ENSMUSG00000074235	predicted gene 10649	ncRNA
unique_peak1-2128-9-2-1.60465090568306-1.87199725847353	chr15	53389286	53389726	+	0	NA	intron (NM_177225, intron 4 of 4)	intron (NM_177225, intron 4 of 4)	-211768	NM_010162	14042	Mm.309395	NM_010162		Ext1	AA409028	exostoses (multiple) 1	protein-coding
unique_peak2-34205-10-8-0.186490343566457-1.078512453669	chr13	41359128	41359703	+	0	NA	intron (NM_001135577, intron 1 of 1)	intron (NM_001135577, intron 1 of 1)	14202	NM_001135577	108934	Mm.38578	NM_001135577	ENSMUSG00000091264	Smim13	2900036K02Rik	small integral membrane protein 13	protein-coding
unique_peak1-3161-14-0-3.89921616035764-4.8164799306237	chr18	38170553	38171113	+	0	NA	Intergenic	Intergenic	-12210	NM_001205336	106952	Mm.247642	NM_139206	ENSMUSG00000024451	Arap3	Centd3|Drag1|E030006K04Rik|cnt-d3	ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3	protein-coding
common_peak2-30167-41-28-0.843167709721088-1.8888294360187	chr6	148895495	148896526	+	0	NA	Intergenic	Intergenic	-1056	NM_019643	56306	Mm.18637	NM_019643	ENSMUSG00000039985	Fam60a	Ppcs1|Pptcs1|Tera	family with sequence similarity 60, member A	protein-coding
common_peak1-11442-69-64-0.572774634230278-1.78026981523164	chr15	100599007	100600414	+	0	NA	intron (NM_021530, intron 1 of 24)	intron (NM_021530, intron 1 of 24)	7532	NM_021530	59033	Mm.209856	NM_021530	ENSMUSG00000023032	Slc4a8	AW493845|C230026C11|NDCBE|kNBC-3	solute carrier family 4 (anion exchanger), member 8	protein-coding
common_peak2-31519-56-76--0.0311907152556579-0.302468067374185	chr8	109564796	109565905	+	0	NA	intron (NM_126165, intron 6 of 10)	PB1D10|SINE|Alu	7164	NM_026513	68023	Mm.482335	NM_026513	ENSMUSG00000078931	Pdf	2610019N19Rik	peptide deformylase (mitochondrial)	protein-coding
common_peak2-30240-20-15-0.488074784591193-0.590343908676236	chr7	4812831	4813723	+	0	NA	intron (NM_026158, intron 1 of 5)	(GAA)n|Simple_repeat|Simple_repeat	4504	NM_026158	67441	Mm.41385	NM_026158	ENSMUSG00000052605	Isoc2b	0610042E07Rik|AI553388|Isoc2	isochorismatase domain containing 2b	protein-coding
common_peak1-19368-58-85--0.130314819811601-0.348707102394169	chrX	18162532	18164172	+	0	NA	Intergenic	L1Md_T|LINE|L1	-124952	NM_175228	75905	Mm.159617	NM_175228	ENSMUSG00000037358	4930578C19Rik	-	RIKEN cDNA 4930578C19 gene	protein-coding
common_peak2-28495-24-20-0.400892479988956-0.591915184368645	chr4	156093600	156094543	+	0	NA	Intergenic	Intergenic	-485105	NM_198305	231003	Mm.423038	NM_198305	ENSMUSG00000078484	Klhl17	AL022703|BC058738	kelch-like 17	protein-coding
common_peak1-12393-87-95-0.410674605060013-1.36535318635962	chr17	70747386	70749498	+	0	NA	Intergenic	L1MA6|LINE|L1	-25690	NM_177639	224997	Mm.311840	NM_027712	ENSMUSG00000003279	Dlgap1	4933422O14Rik|9630002F18|AI845682|AI848168|BB075781|D17Bwg0511e|GKAP/SAPAP|GKPA/SAPAP|Gkap|Sapap1|mKIAA4162	discs, large (Drosophila) homolog-associated protein 1	protein-coding
common_peak2-25820-18-18-0.0649916377847664-0.323898164595606	chr19	38084160	38084852	+	0	NA	intron (NM_001099634, intron 3 of 52)	(CATA)n|Simple_repeat|Simple_repeat	33561	NM_001099634	226101	Mm.34674	NM_177035	ENSMUSG00000048612	Myof	2310004N10Rik|2310051D19Rik|E030042N20Rik|Fer1l3	myoferlin	protein-coding
common_peak1-13207-76-87-0.302512767225984-0.838382413282768	chr19	23686816	23688251	+	0	NA	intron (NM_026188, intron 2 of 5)	intron (NM_026188, intron 2 of 5)	39769	NM_026188	67483	Mm.443287	NM_026188	ENSMUSG00000033053	1700028P14Rik	AV209940	RIKEN cDNA 1700028P14 gene	protein-coding
common_peak2-23778-17-23--0.366666162516118-0.383878263347744	chr15	99074145	99074933	+	0	NA	intron (NM_016766, intron 11 of 14)	intron (NM_016766, intron 11 of 14)	-7680	NR_045627	73600	Mm.475134	NR_045627		1700120C14Rik	-	RIKEN cDNA 1700120C14 gene	ncRNA
common_peak2-29103-15-11-0.4272022498345-0.503257505534083	chr5	122698746	122699178	+	0	NA	non-coding (NR_104441, exon 8 of 13)	non-coding (NR_104441, exon 8 of 13)	15507	NR_104441	654470	Mm.28804	NM_001039153	ENSMUSG00000038593	Tctn1	G730031O11Rik|Tect1	tectonic family member 1	protein-coding
common_peak2-29394-1-6--2.43441193227435-1.56314192529759	chr6	83165062	83165452	+	0	NA	Intergenic	Intergenic	-22112	NM_001166067	232156	Mm.333189	NM_001166067	ENSMUSG00000068323	Slc4a5	C330006M16|C330016K18Rik	solute carrier family 4, sodium bicarbonate cotransporter, member 5	protein-coding
common_peak1-13509-34-25-0.681628808860174-1.24799833770813	chr2	92749566	92750830	+	0	NA	Intergenic	Intergenic	-5060	NM_030725	80976	Mm.33490	NM_030725	ENSMUSG00000027220	Syt13	5730409J20Rik|AI549909|mKIAA1427	synaptotagmin XIII	protein-coding
unique_peak1-5329-7-0-2.79909083029819-2.40823996531185	chr5	81362991	81363432	+	0	NA	Intergenic	Lx2A1|LINE|L1	-87407	NM_198702	319387	Mm.273631	NM_198702	ENSMUSG00000037605	Lphn3	5430402I23Rik|CIRL-3|D130075K09Rik|Gm1379|LEC3|mKIAA0768	latrophilin 3	protein-coding
common_peak2-31426-21-18-0.32156175182265-0.48779450977742	chr8	94706906	94707611	+	0	NA	Intergenic	RSINE1|SINE|B4	172761	NR_110452	71296	Mm.86664	NR_033641	ENSMUSG00000031736	Crnde	4933436C20Rik	colorectal neoplasia differentially expressed (non-protein coding)	ncRNA
common_peak1-7548-70-57-0.761985921247827-2.68428829838238	chr1	36938596	36940319	+	0	NA	intron (NM_018872, intron 2 of 40)	L1ME1|LINE|L1	56915	NM_018872	56030	Mm.186943	NM_018872	ENSMUSG00000026116	Tmem131	2610524E03Rik|CC28|D1Bwg0491e|Neg|RW1|YR-23|mKIAA0257	transmembrane protein 131	protein-coding
common_peak1-17691-73-84-0.28300407028752-0.720952936333916	chr7	68020956	68023394	+	0	NA	Intergenic	(CAAAA)n|Simple_repeat|Simple_repeat	-737070	NM_001082962	20646	Mm.274995	NM_013670	ENSMUSG00000000948	Snrpn	2410045I01Rik|HCERN3|Peg4|Pwcr1|SMN	small nuclear ribonucleoprotein N	protein-coding
common_peak1-15952-20-28--0.369906210536379-0.457753417732779	chr5	30278749	30279514	+	0	NA	intron (NR_105781, intron 2 of 2)	intron (NR_105781, intron 2 of 2)	-60570	NM_031168	16193	Mm.1019	NM_031168	ENSMUSG00000025746	Il6	Il-6	interleukin 6	protein-coding
unique_peak1-3047-11-4-1.18676548936425-1.68134727924692	chr18	5522652	5523267	+	0	NA	intron (NR_033552, intron 5 of 6)	intron (NR_033552, intron 5 of 6)	-68899	NM_011546	21417	Mm.3929	NM_011546	ENSMUSG00000024238	Zeb1	3110032K11Rik|AREB6|BZP|MEB1|Nil2|TCF-8|Tcf18|Tcf8|Tw|ZEB|Zfhep|Zfhx1a|Zfx1a|Zfx1ha|[delta]EF1	zinc finger E-box binding homeobox 1	protein-coding
unique_peak2-34537-4-6--0.830815435910851-0.989110657569874	chr14	55745753	55746167	+	0	NA	Intergenic	Intergenic	-10188	NM_177049	319984	Mm.19047	NM_177049	ENSMUSG00000022208	Jph4	9330157P13Rik|JP-4|JPHL1	junctophilin 4	protein-coding
unique_peak2-33173-1-6--2.43441193227435-1.56314192529759	chr10	95414523	95414887	+	0	NA	intron (NM_001001932, intron 1 of 28)	RLTR15|LTR|ERVK	11408	NM_001001932	216238	Mm.210035	NM_001001932	ENSMUSG00000036499	Eea1	A430109M19Rik|B230358H09Rik|ZFYVE2	early endosome antigen 1	protein-coding
common_peak1-12930-627-670-1.04476214248997-55.3378053835111	chr19	5842104	5850542	+	0	NA	promoter-TSS (NR_003513)	promoter-TSS (NR_003513)	-845	NR_003513	66961	Mm.281895	NR_003513		Neat1	2310043N10Rik|VINC	nuclear paraspeckle assembly transcript 1 (non-protein coding)	ncRNA
common_peak2-28991-39-35-0.445836245476841-0.810079075897168	chr5	107900370	107901380	+	0	NA	intron (NM_001255991, intron 5 of 8)	intron (NM_001255991, intron 5 of 8)	-25889	NM_001007574	231570	Mm.261891	NM_001007574	ENSMUSG00000044060	A830010M20Rik	AI849226|Kiaa1107|mKIAA1107	RIKEN cDNA A830010M20 gene	protein-coding
unique_peak1-2562-16-3-2.11826364226806-2.65002542325363	chr16	24933398	24934056	+	0	NA	intron (NM_001145954, intron 5 of 7)	intron (NM_001145954, intron 5 of 7)	-125998	NR_040374	319487	Mm.137341	NR_040374	ENSMUSG00000096960	A230028O05Rik	-	RIKEN cDNA A230028O05 gene	ncRNA
unique_peak1-3111-14-4-1.57728806547028-2.4322161449009	chr18	32145439	32146256	+	0	NA	intron (NM_032394, intron 20 of 46)	intron (NM_032394, intron 20 of 46)	-36557	NM_001025381	574402	Mm.391108	NM_001025381	ENSMUSG00000052229	Gpr17	AI853548	G protein-coupled receptor 17	protein-coding
unique_peak1-1971-11-0-3.50869358425161-3.61235994796777	chr14	119098987	119099459	+	0	NA	intron (NM_001163676, intron 1 of 29)	intron (NM_001163676, intron 1 of 29)	6218	NM_001163676	239273	Mm.40537	NM_001033336	ENSMUSG00000032849	Abcc4	D630049P08Rik|MOATB|MRP4	ATP-binding cassette, sub-family C (CFTR/MRP), member 4	protein-coding
common_peak2-20923-20-26--0.266812717572275-0.373496418836697	chr11	6291571	6292440	+	0	NA	Intergenic	Intergenic	-3123	NM_001005867	52915	Mm.1144	NM_028601	ENSMUSG00000041164	Zmiz2	Zimp7	zinc finger, MIZ-type containing 2	protein-coding
common_peak2-30715-10-21--1.10301627362853-1.16735254179725	chr7	113368719	113369485	+	0	NA	Intergenic	Lx3A|LINE|L1	-10248	NM_029000	74558	Mm.458429	NM_029000	ENSMUSG00000045868	Gvin1	9130002C22Rik|9830104F22Rik|Iigs1|VLIG|VLIG-1	GTPase, very large interferon inducible 1	protein-coding
unique_peak2-33177-8-7-0.00522241794757061-1.00793137938329	chr10	95564356	95564816	+	0	NA	Intergenic	Intergenic	-124255	NR_110448	74881	Mm.410819	NR_110448		4930459C07Rik	-	RIKEN cDNA 4930459C07 gene	ncRNA
unique_peak2-36567-5-8--0.874305337448166-1.10484139239135	chr2	170146454	170146992	+	0	NA	Intergenic	HAL1|LINE|L1	-35138	NR_040610	73303	Mm.443297	NR_040610	ENSMUSG00000086999	Bcas1os2	1700040N02Rik	breast carcinoma amplified sequence 1, opposite strand 2	ncRNA
unique_peak1-6477-7-0-2.79909083029819-2.40823996531185	chr7	111071954	111072345	+	0	NA	intron (NM_146959, intron 4 of 4)	L1Md_T|LINE|L1	8573	NM_001271020	258961	Mm.438897	NM_146959	ENSMUSG00000042219	Olfr631	MOR3-1	olfactory receptor 631	protein-coding
common_peak2-25441-44-19-1.49996473968117-4.61866184422219	chr19	4045346	4046196	+	0	NA	Intergenic	PB1D10|SINE|Alu	-3550	NM_181796	14869	Mm.441542	NM_181796	ENSMUSG00000038155	Gstp2	GSTpiA|Gst-3|Gst3	glutathione S-transferase, pi 2	protein-coding
common_peak1-9973-27-32--0.0528481684632176-0.301029995663997	chr12	117843496	117844297	+	0	NA	intron (NM_011215, intron 2 of 22)	HAL1-2a_MD|LINE|L1	119703	NM_011215	19276	Mm.206054	NM_011215	ENSMUSG00000056553	Ptprn2	4930425H11Rik|IA2beta|PTP-NP|Phol|mKIAA0387|phogrin	protein tyrosine phosphatase, receptor type, N polypeptide 2	protein-coding
common_peak2-30206-15-19--0.309763344331706-0.356936432242222	chr7	75415482	75416173	+	0	NA	intron (NR_040340, intron 2 of 3)	intron (NR_040340, intron 2 of 3)	-2898	NM_001013811	434197	Mm.216193	NM_001013811		Fam169b	EG434197	family with sequence similarity 169, member B	protein-coding
common_peak1-16941-33-25-0.630897844384437-1.05951140195658	chr6	83506221	83507654	+	0	NA	intron (NM_024239, intron 6 of 9)	intron (NM_024239, intron 6 of 9)	-11096	NR_078345	100861870	Mm.461230	NR_078345		Gm21284	-	predicted gene, 21284	ncRNA
unique_peak1-315-30-8-1.99975040804956-4.4860419630448	chr1	131377866	131379018	+	0	NA	intron (NM_172485, intron 2 of 27)	intron (NM_172485, intron 2 of 27)	208561	NM_172485	210417	Mm.380518	NM_172485	ENSMUSG00000042581	Thsd7b	1700074E13Rik|B930082A18|D130067I03Rik	thrombospondin, type I, domain containing 7B	protein-coding
common_peak2-24717-10-10--0.103016273628528-0.301029995663987	chr17	46704539	46705060	+	0	NA	intron (NM_175168, intron 18 of 19)	intron (NM_175168, intron 18 of 19)	-11688	NM_020493	20807	Mm.45044	NM_020493	ENSMUSG00000015605	Srf	AW049942|AW240594	serum response factor	protein-coding
common_peak1-17047-48-42-0.544662396532717-1.219227950326	chr6	95717992	95719093	+	0	NA	Intergenic	MTC|LTR|MaLR	-49702	NM_011507	20917	Mm.371585	NM_011507	ENSMUSG00000061838	Suclg2	AF171077|AW556404|D6Wsu120e|SCS-betaG	succinate-Coenzyme A ligase, GDP-forming, beta subunit	protein-coding
common_peak1-19396-11-19--0.813234510635749-0.769930178837768	chrX	52912190	52912828	+	0	NA	Intergenic	RLTR13A3|LTR|ERVK	107736	NM_001220497	100039055	Mm.380174	NM_001220497		Gm16404	EG625711	predicted gene 16404	protein-coding
common_peak1-19444-9-14--0.717277189204299-0.53895475198017	chrX	97431392	97431850	+	0	NA	intron (NM_001177943, intron 1 of 8)	Lx7|LINE|L1	-144815	NR_030525	751534		NR_030525		Mir676	Mirn676|mmu-mir-676	microRNA 676	ncRNA
unique_peak1-381-9-6-0.382258484346616-1.11707584880836	chr1	152610087	152610594	+	0	NA	intron (NM_001024720, intron 15 of 106)	MTEa|LTR|MaLR	230225	NM_001024720	545370	Mm.379425	NM_001024720	ENSMUSG00000066842	Hmcn1	EG545370|Gm201	hemicentin 1	protein-coding
unique_peak1-6551-7-4-0.477162735410827-1.09384600808989	chr7	128744888	128745409	+	0	NA	Intergenic	B4|SINE|B4	-11798	NR_102286	75793	Mm.23397	NR_102286		4933432K03Rik	1700001C18Rik|4930433G11Rik|AI428127	RIKEN cDNA 4933432K03 gene	ncRNA
common_peak2-27657-8-11--0.579740082773585-1.14218153353838	chr3	108444160	108444668	+	0	NA	intron (NM_181400, intron 13 of 14)	RSINE1|SINE|B4	-12417	NM_145543	229725	Mm.214545	NM_145543	ENSMUSG00000027884	Clcc1	Mclc	chloride channel CLIC-like 1	protein-coding
common_peak2-21608-9-12--0.510826311736872-0.394412252720706	chr11	100013973	100014570	+	0	NA	Intergenic	Intergenic	-7038	NM_008471	16669	Mm.439699	NM_008471	ENSMUSG00000020911	Krt19	AI663979|EndoC|K19|Krt-1.19|Krt1-19	keratin 19	protein-coding
common_peak1-14143-10-11--0.228547155712387-0.31137425193576	chr2	131902556	131903075	+	0	NA	intron (NM_018824, intron 7 of 15)	intron (NM_018824, intron 7 of 15)	-47091	NM_175445	215653	Mm.204737	NM_175445	ENSMUSG00000027339	Rassf2	3830431H01Rik|9030412M04Rik|AI852669|AW495050	Ras association (RalGDS/AF-6) domain family member 2	protein-coding
common_peak2-19823-11-10-0.0492619656143161-0.31137425193576	chr1	89090229	89090767	+	0	NA	intron (NM_021600, intron 6 of 11)	B4A|SINE|B4	3326	NM_021600	11447	Mm.2811	NM_021600	ENSMUSG00000026251	Chrnd	Achr-4|Acrd|L10076	cholinergic receptor, nicotinic, delta polypeptide	protein-coding
unique_peak2-39687-10-18--0.891512168434816-0.804350088532826	chr9	109095177	109095907	+	0	NA	intron (NM_177598, intron 3 of 9)	intron (NM_177598, intron 3 of 9)	2947	NM_177598	211305	Mm.225242	NM_177598	ENSMUSG00000049314	Fbxw13	E330017E16	F-box and WD-40 domain protein 13	protein-coding
unique_peak2-39156-3-7--1.41398308995928-1.23214870625617	chr8	91133373	91133672	+	0	NA	Intergenic	MIR|SINE|MIR	26505	NM_027840	71607	Mm.270607	NM_027840	ENSMUSG00000031662	Snx20	9130017C17Rik	sorting nexin 20	protein-coding
unique_peak2-38954-6-17--1.60452689106201-1.49151883326343	chr8	31187476	31187946	+	0	NA	Intergenic	Intergenic	-491156	NR_045856	71314	Mm.158666	NR_045856	ENSMUSG00000097044	4933433F19Rik	-	RIKEN cDNA 4933433F19 gene	ncRNA
common_peak1-12396-21-6-1.76213434320863-2.81226952737395	chr17	70846084	70847033	+	0	NA	intron (NM_027712, intron 1 of 9)	intron (NM_027712, intron 1 of 9)	-24892	NM_001128180	224997	Mm.311840	NM_027712	ENSMUSG00000003279	Dlgap1	4933422O14Rik|9630002F18|AI845682|AI848168|BB075781|D17Bwg0511e|GKAP/SAPAP|GKPA/SAPAP|Gkap|Sapap1|mKIAA4162	discs, large (Drosophila) homolog-associated protein 1	protein-coding
common_peak1-12264-9-7-0.18961340640422-1.05908390183068	chr17	40877322	40877809	+	0	NA	Intergenic	Intergenic	13496	NM_001038500	619517	Mm.391018	NM_001038500	ENSMUSG00000073396	Esp1	EG619517|Gm6084	exocrine gland secreted peptide 1	protein-coding
unique_peak1-4908-13-7-0.778472030637769-0.817533494790411	chr4	46489532	46490250	+	0	NA	Intergenic	Intergenic	-12310	NM_053179	94181	Mm.249349	NM_053179	ENSMUSG00000028334	Nans	4632418E04Rik|BB056474|Sas	N-acetylneuraminic acid synthase (sialic acid synthase)	protein-coding
unique_peak1-6654-7-1-1.79909083029819-1.80617997398389	chr8	14815480	14815952	+	0	NA	intron (NM_172910, intron 9 of 15)	intron (NM_172910, intron 9 of 15)	-72820	NM_012000	26889	Mm.254027	NM_012000	ENSMUSG00000026317	Cln8	mnd	ceroid-lipofuscinosis, neuronal 8	protein-coding
unique_peak1-5791-12-2-2.06381348436648-2.79529063155376	chr6	58846715	58847513	+	0	NA	intron (NM_028705, intron 22 of 24)	intron (NM_028705, intron 22 of 24)	10006	NM_021432	58243	Mm.389747	NM_021432	ENSMUSG00000055430	Nap1l5	1110020M21Rik	nucleosome assembly protein 1-like 5	protein-coding
common_peak1-18598-49-46-0.451694971347546-0.943512743618327	chr8	106640155	106642309	+	0	NA	intron (NM_009868, intron 2 of 11)	Lx6|LINE|L1	15707	NM_009868	12562	Mm.21767	NM_009868	ENSMUSG00000031871	Cdh5	7B4|AA408225|Cd144|VE-Cad|VECD|VEcad|Vec	cadherin 5	protein-coding
common_peak1-9554-29-30-0.158093770228236-0.384630725886669	chr11	117205327	117206358	+	0	NA	intron (NM_001113488, intron 1 of 9)	intron (NM_001113488, intron 1 of 9)	12215	NM_001113488	53860	Mm.38450	NM_017380	ENSMUSG00000059248	Sept9	MSF1|Msf|PNUTL4|Sint1	septin 9	protein-coding
common_peak1-8114-79-142--0.331036169601769-0.9673757205616	chr1	184032817	184034430	+	0	NA	Intergenic	Intergenic	-21245	NM_012058	27058	Mm.303071	NM_012058	ENSMUSG00000026511	Srp9	9kDa	signal recognition particle 9	protein-coding
common_peak2-21947-15-12-0.311725032414564-0.425539671739611	chr12	31499202	31499770	+	0	NA	Intergenic	Intergenic	-69703	NM_001159743	100294583	Mm.399726	NM_001159743	ENSMUSG00000054204	Fam150b	6230419C23Rik	family with sequence similarity 150, member B	protein-coding
unique_peak1-5979-11-5-0.923731083530457-1.477227296591	chr6	97353933	97354459	+	0	NA	intron (NM_145148, intron 5 of 23)	intron (NM_145148, intron 5 of 23)	-151422	NM_001081157	320502	Mm.68163	NM_001081157	ENSMUSG00000044086	Lmod3	5430424A14Rik	leiomodin 3 (fetal)	protein-coding
unique_peak1-7057-11-1-2.50869358425161-2.83420869758413	chr9	3334622	3335214	+	0	NA	promoter-TSS (NM_026303)	promoter-TSS (NM_026303)	-313	NM_026303	67667	Mm.116968	NM_026303	ENSMUSG00000025899	Alkbh8	4930562C03Rik|8030431D03Rik|9430088N01Rik|Abh8	alkB, alkylation repair homolog 8 (E. coli)	protein-coding
unique_peak1-2889-9-3-1.18961340640422-1.57096726280955	chr17	43157832	43158304	+	0	NA	intron (NM_178589, intron 1 of 5)	intron (NM_178589, intron 1 of 5)	4564	NM_178589	94185	Mm.200792	NM_178589	ENSMUSG00000023915	Tnfrsf21	AA959878|DR6|R74815|TR7	tumor necrosis factor receptor superfamily, member 21	protein-coding
common_peak1-9159-27-38--0.293856267967013-0.412842868820461	chr11	77783606	77784703	+	0	NA	intron (NM_001291225, intron 5 of 15)	intron (NM_001291225, intron 5 of 15)	-12164	NM_174852	268448	Mm.274329	NM_174852	ENSMUSG00000037791	Phf12	2410142K10Rik|F630045O13|PF1|mKIAA1523	PHD finger protein 12	protein-coding
common_peak2-25661-24-20-0.400892479988956-0.591915184368645	chr19	10304309	10305210	+	0	NA	intron (NM_001033481, intron 1 of 25)	MIRb|SINE|MIR	10479	NM_001033481	225908	Mm.329716	NM_001033481	ENSMUSG00000036098	Myrf	6030439E18|Gm1804|Gm98|Mrf	myelin regulatory factor	protein-coding
common_peak2-26567-11-8-0.338768582809301-1.14218153353838	chr2	103286587	103287042	+	0	NA	intron (NM_010125, intron 4 of 6)	ID_B1|SINE|B4	22589	NM_010125	13711	Mm.20888	NM_010125	ENSMUSG00000027186	Elf5	ESE-2|ESE-5|ESE-5.	E74-like factor 5	protein-coding
unique_peak1-5039-10-2-1.77145284428761-2.09384600808989	chr4	133116691	133117208	+	0	NA	Intergenic	Intergenic	7644	NM_011850	23957	Mm.346759	NM_011850	ENSMUSG00000037583	Nr0b2	SHP|SHP-1|Shp1	nuclear receptor subfamily 0, group B, member 2	protein-coding
common_peak2-24515-18-19--0.00900894365901106-0.306598483909153	chr17	26604762	26605835	+	0	NA	Intergenic	Intergenic	40119	NM_013642	19252	Mm.239041	NM_013642	ENSMUSG00000024190	Dusp1	3CH134|MKP1|Ptpn16|U19515|erp|mkp-1	dual specificity phosphatase 1	protein-coding
common_peak2-19556-26-62--1.04938083134145-2.76923187144076	chr1	5082844	5083743	+	0	NA	intron (NM_133826, intron 3 of 13)	B1_Mur2|SINE|Alu	10039	NM_133826	108664	Mm.27082	NM_133826	ENSMUSG00000033793	Atp6v1h	0710001F19Rik|AU022349|CGI-11|SFD|SFDalpha|SFDbeta|VMA13	ATPase, H+ transporting, lysosomal V1 subunit H	protein-coding
common_peak2-29686-16-17--0.0516613591742505-0.301029995663984	chr6	72620040	72620807	+	0	NA	intron (NM_009332, intron 3 of 11)	intron (NM_009332, intron 3 of 11)	40598	NR_040421	100038714	Mm.321330	NR_040421		Gm15401	ENSMUSG00000072999|OTTMUSG00000021199	predicted gene 15401	ncRNA
common_peak1-8211-128-212--0.0697036181477628-0.34341627397537	chr10	7680400	7682174	+	0	NA	Intergenic	Intergenic	-5366	NM_138667	68652	Mm.193041	NM_138667	ENSMUSG00000015755	Tab2	1110030N06Rik|A530078N03Rik|Map3k7ip2|mKIAA0733	TGF-beta activated kinase 1/MAP3K7 binding protein 2	protein-coding
common_peak2-20732-19-17-0.232762325219374-0.392630012299441	chr10	99241394	99242136	+	0	NA	Intergenic	Intergenic	-19473	NM_027945	71832	Mm.483162	NM_027945	ENSMUSG00000046934	Csl	1700007H16Rik	citrate synthase like	protein-coding
unique_peak1-212-8-0-3.00522241794757-2.70926996097583	chr1	87412445	87413052	+	0	NA	Intergenic	L1Md_T|LINE|L1	82637	NM_030194	109032	Mm.335802	NM_030194	ENSMUSG00000070034	Sp110	5031415C07Rik|52kDa|5830484A20Rik|ENSMUSG00000075603|Ifi75|Ipr1	Sp110 nuclear body protein	protein-coding
common_peak2-23743-5-7--0.704380336005853-1.01466476204226	chr15	97773302	97773661	+	0	NA	Intergenic	Intergenic	-21179	NM_201359	380967	Mm.196630	NM_201359	ENSMUSG00000052369	Tmem106c	AI046681|BC046621|D15Ertd405e	transmembrane protein 106C	protein-coding
unique_peak2-39606-1-5--2.2120195109379-1.32905871926422	chr9	81677501	81677754	+	0	NA	Intergenic	Lx5|LINE|L1	-79724	NM_175213	75033	Mm.335329	NM_175213	ENSMUSG00000043289	Mei4	4930486G11Rik	meiosis-specific, MEI4 homolog (S. cerevisiae)	protein-coding
common_peak1-11394-16-20--0.274053780510699-0.353907621462756	chr15	98048583	98049295	+	0	NA	intron (NM_001011780, intron 1 of 2)	intron (NM_001011780, intron 1 of 2)	2548	NM_001011780	634104	Mm.259785	NM_001011780	ENSMUSG00000090129	Olfr287	MOR286-1	olfactory receptor 287	protein-coding
common_peak1-18738-11-9-0.186765489364251-0.344532117358383	chr8	123983105	123983603	+	0	NA	Intergenic	Intergenic	82500	NM_029597	76405	Mm.165697	NM_029597	ENSMUSG00000031809	1700018B08Rik	1700084O22Rik	RIKEN cDNA 1700018B08 gene	protein-coding
common_peak2-26614-89-119-0.128076159217484-0.426154880266178	chr2	117120339	117122063	+	0	NA	intron (NM_011246, intron 6 of 16)	intron (NM_011246, intron 6 of 16)	45726	NM_026620	68215	Mm.219389	NM_026620	ENSMUSG00000027349	Fam98b	2610510H03Rik	family with sequence similarity 98, member B	protein-coding
unique_peak2-32972-8-20--1.38709500483119-1.45476480588849	chr10	53629401	53630067	+	0	NA	intron (NM_008548, intron 11 of 12)	L1MA9|LINE|L1	-159019	NM_001081428	75906	Mm.436785	NM_001081428	ENSMUSG00000019856	Fam184a	3110012E06Rik|4930438C08Rik|4930589M24Rik	family with sequence similarity 184, member A	protein-coding
common_peak1-18802-35-27-0.6240153364049-1.10223211335955	chr9	67484417	67485871	+	0	NA	Intergenic	Intergenic	-77634	NM_001081242	70549	Mm.33645	NM_027458	ENSMUSG00000052698	Tln2	5730421P04Rik|AI507121|AI787438|AL118320|mKIAA0320	talin 2	protein-coding
common_peak1-8943-25-21-0.402418286707809-0.580176690544129	chr11	53858755	53859530	+	0	NA	Intergenic	Intergenic	-17550	NM_019687	30805	Mm.274590	NM_019687	ENSMUSG00000020334	Slc22a4	Octn1	solute carrier family 22 (organic cation transporter), member 4	protein-coding
common_peak2-28549-18-30--0.641277159158523-0.738267116931589	chr5	3893262	3894189	+	0	NA	intron (NM_172135, intron 1 of 1)	CpG	208	NM_001013023	545725	Mm.99593	NM_172135	ENSMUSG00000040429	Mterf1a	4931431L11Rik|9230106K09Rik|Mterf|Mterf1	mitochondrial transcription termination factor 1a	protein-coding
unique_peak1-592-8-2-1.42025991722641-1.65811743852845	chr10	16546015	16546495	+	0	NA	Intergenic	L1Md_T|LINE|L1	269333	NR_038020	100504235	Mm.84044	NR_038020		Gm20125	-	predicted gene, 20125	ncRNA
unique_peak1-4718-9-1-2.18961340640422-2.31132995230379	chr3	104184601	104185093	+	0	NA	Intergenic	Intergenic	130932	NM_001025067	269473	Mm.34855	NM_001025067	ENSMUSG00000032913	Lrig2	4632419I10Rik|BB096938	leucine-rich repeats and immunoglobulin-like domains 2	protein-coding
common_peak2-23728-23-52--1.00615295005412-2.21947156384788	chr15	95790094	95791553	+	0	NA	intron (NM_001253813, intron 17 of 20)	intron (NM_001253813, intron 17 of 20)	119160	NR_003627	402773	Mm.210567	NM_001033483		D030018L15Rik	-	nuclear receptor coactivator 2 pseudogene	pseudo
common_peak2-24146-95-163--0.20963665959407-0.615252092647737	chr16	37867655	37869364	+	0	NA	promoter-TSS (NM_177093)	promoter-TSS (NM_177093)	23	NM_177093	320184	Mm.390882	NM_177093	ENSMUSG00000034158	Lrrc58	1810012N18Rik|C330018J07Rik	leucine rich repeat containing 58	protein-coding
common_peak1-7966-11-23--1.07626891646954-1.24082643394777	chr1	156473869	156474347	+	0	NA	intron (NM_009782, intron 6 of 46)	L2a|LINE|L2	98942	NM_009782	12290	Mm.267517	NM_009782	ENSMUSG00000004110	Cacna1e	A430040I15|BII|Cach6|Cacnl1a6|Cav2.3|Cchra1|alpha1E	calcium channel, voltage-dependent, R type, alpha 1E subunit	protein-coding
common_peak1-17995-12-10-0.189344366450341-0.386243247519795	chr7	139281546	139282020	+	0	NA	intron (NM_018867, intron 4 of 13)	intron (NM_018867, intron 4 of 13)	64641	NM_018867	55987	Mm.471654	NM_018867	ENSMUSG00000030862	Cpxm2	4632435C11Rik|CPX-2|Cpx2	carboxypeptidase X 2 (M14 family)	protein-coding
common_peak1-19034-87-122-0.0531226004419292-0.332302200896337	chr9	64339995	64341776	+	0	NA	intron (NM_172522, intron 1 of 22)	ID_B1|SINE|B4	107452	NM_001134399	214058	Mm.127721	NM_172522	ENSMUSG00000036466	Megf11	2410080H04Rik|D130061K05	multiple EGF-like-domains 11	protein-coding
common_peak2-31470-43-24-1.13870699574898-3.01487716443559	chr8	105990571	105991855	+	0	NA	Intergenic	Intergenic	-119779	NR_036588	69794	Mm.396139	NR_036588		1600027J07Rik	-	RIKEN cDNA 1600027J07 gene	ncRNA
common_peak1-19042-12-8-0.478850983645327-0.562038191119709	chr9	65215313	65215815	+	0	NA	intron (NM_001111145, intron 1 of 6)	intron (NM_001111145, intron 1 of 6)	6697	NM_001111145	208080	Mm.291862	NM_001111145	ENSMUSG00000086228	Ubap1l	Gm514	ubiquitin-associated protein 1-like	protein-coding
common_peak1-10601-9-9--0.132314688483142-1.03275496310833	chr14	31660266	31660863	+	0	NA	intron (NM_028839, intron 1 of 7)	B3A|SINE|B2	21784	NM_028839	69179	Mm.143025	NM_028839	ENSMUSG00000006526	Tmem110	1810038N08Rik|2310014H19Rik|AW554125	transmembrane protein 110	protein-coding
unique_peak2-39012-5-18--1.95230784944944-1.99473478107052	chr8	54529350	54530100	+	0	NA	Intergenic	Intergenic	-67331	NM_001205054	11593	Mm.334535	NM_001005847	ENSMUSG00000031521	Aga	AW060726	aspartylglucosaminidase	protein-coding
common_peak2-26333-73-69-0.563111989480255-1.77011778727375	chr2	34825597	34826794	+	0	NA	Intergenic	Intergenic	-8903	NM_009421	22029	Mm.239514	NM_009421	ENSMUSG00000026875	Traf1	4732496E14Rik	TNF receptor-associated factor 1	protein-coding
common_peak1-9930-16-16-0.0308008010177225-0.307611222530525	chr12	103425112	103425943	+	0	NA	intron (NM_172152, intron 2 of 16)	intron (NM_172152, intron 2 of 16)	57898	NM_172152	238384	Mm.312448	NM_172152	ENSMUSG00000041771	Slc24a4	A930002M03Rik|AW492432|NCKX4	solute carrier family 24 (sodium/potassium/calcium exchanger), member 4	protein-coding
common_peak2-20088-52-74--0.120558700230181-0.339000539072378	chr1	156035423	156036784	+	0	NA	Intergenic	Intergenic	-12214	NM_001204908	100503355	Mm.484410	NM_001204908	ENSMUSG00000066797	Zfp648	ENSMUSG00000066797|Gm10178|Gm203	zinc finger protein 648	protein-coding
common_peak1-8439-12-14--0.25811461052088-0.309074325783021	chr10	78425111	78425555	+	0	NA	promoter-TSS (NM_147042)	promoter-TSS (NM_147042)	-721	NM_147042	259044	Mm.223425	NM_147042	ENSMUSG00000042774	Olfr1353	MOR139-2	olfactory receptor 1353	protein-coding
common_peak2-27711-11-7-0.508693584251613-1.21681515183528	chr3	122364893	122365329	+	0	NA	Intergenic	Intergenic	-42479	NM_153118	214459	Mm.209491	NM_153118	ENSMUSG00000039735	Fnbp1l	2610318I01Rik|AW548221|TOCA1|toca-1	formin binding protein 1-like	protein-coding
common_peak2-27960-28-20-0.660641697042702-1.00055860626307	chr4	40722343	40723205	+	0	NA	Intergenic	Intergenic	-17856	NM_021535	74255	Mm.289929	NM_021535		Smu1	2600001O03Rik|2610203K23Rik|AB044414|AI845086|AW556129|Bwd	smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)	protein-coding
common_peak2-29474-18-12-0.612479433087259-0.739965416525508	chr6	30400890	30401656	+	0	NA	3' UTR (NM_029742, exon 10 of 10)	3' UTR (NM_029742, exon 10 of 10)	49364	NM_029742	76788	Mm.277308	NM_029742	ENSMUSG00000029775	Klhdc10	2410127E18Rik|AI593221|mKIAA0265	kelch domain containing 10	protein-coding
unique_peak2-36092-1-9--2.94898510510411-2.31132995230379	chr19	57238444	57238889	+	0	NA	intron (NM_001290813, intron 2 of 20)	GA-rich|Low_complexity|Low_complexity	33455	NM_001103177	226251	Mm.217161	NM_178688	ENSMUSG00000025085	Ablim1	2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059	actin-binding LIM protein 1	protein-coding
common_peak2-23914-8-8--0.164702583494742-1.00793137938329	chr16	5233606	5234005	+	0	NA	promoter-TSS (NM_145362)	promoter-TSS (NM_145362)	91	NM_145362	208211	Mm.34581	NM_145362	ENSMUSG00000039427	Alg1	HMAT1|HMT1	asparagine-linked glycosylation 1 (beta-1,4-mannosyltransferase)	protein-coding
unique_peak2-37452-3-7--1.41398308995928-1.23214870625617	chr5	3538937	3539347	+	0	NA	Intergenic	Intergenic	-4691	NM_001042501	68152	Mm.240265	NM_026583		Fam133b	2900022K02Rik|5830415L20Rik	family with sequence similarity 133, member B	protein-coding
common_peak2-29344-18-13-0.505564229170747-0.625923329873571	chr5	149006882	149007455	+	0	NA	intron (NM_029920, intron 4 of 14)	intron (NM_029920, intron 4 of 14)	204312	NM_007513	11987	Mm.275489	NM_007513	ENSMUSG00000041313	Slc7a1	4831426K01Rik|AI447493|Atrc-1|Atrc1|Cat1|Rec-1|Rev-1|mCAT-1	solute carrier family 7 (cationic amino acid transporter, y+ system), member 1	protein-coding
unique_peak1-7239-10-3-1.35641534500877-1.75805390616669	chr9	76000756	76001256	+	0	NA	Intergenic	Intergenic	60458	NM_205844	404194	Mm.213862	NM_205844	ENSMUSG00000059383	Gfral	AY457637|Gral	GDNF family receptor alpha like	protein-coding
unique_peak2-35429-3-7--1.41398308995928-1.23214870625617	chr17	34849687	34850140	+	0	NA	exon (NM_031176, exon 18 of 33)	exon (NM_031176, exon 18 of 33)	30929	NM_009780	12268	Mm.477109	NM_009780	ENSMUSG00000073418	C4b	C4|Ss	complement component 4B (Chido blood group)	protein-coding
unique_peak1-328-11-2-1.92373108353046-2.32232533660526	chr1	133189984	133190525	+	0	NA	intron (NM_001081011, intron 21 of 22)	intron (NM_001081011, intron 21 of 22)	-14114	NM_019777	56489	Mm.386783	NM_019777	ENSMUSG00000042349	Ikbke	AW558201|IKK-i|IKKepsilon|Ikki	inhibitor of kappaB kinase epsilon	protein-coding
common_peak1-8985-17-27--0.589058583852566-0.604689589251113	chr11	59600291	59600992	+	0	NA	promoter-TSS (NR_110894)	promoter-TSS (NR_110894)	83	NR_110894	194908	Mm.344651	NM_183139		Pld6	4933433K01Rik|Gm10|Zuc|mZuc|mitoPLD	phospholipase D family, member 6	protein-coding
unique_peak1-7240-9-2-1.60465090568306-1.87199725847353	chr9	76008463	76008950	+	0	NA	Intergenic	Lx3C|LINE|L1	52758	NM_205844	404194	Mm.213862	NM_205844	ENSMUSG00000059383	Gfral	AY457637|Gral	GDNF family receptor alpha like	protein-coding
common_peak1-7866-9-8-0.0196884049619079-1.03275496310833	chr1	133221932	133222454	+	0	NA	intron (NM_001081011, intron 13 of 22)	intron (NM_001081011, intron 13 of 22)	-46053	NM_019777	56489	Mm.386783	NM_019777	ENSMUSG00000042349	Ikbke	AW558201|IKK-i|IKKepsilon|Ikki	inhibitor of kappaB kinase epsilon	protein-coding
common_peak1-10944-30-20-0.777357986713112-1.30767018140166	chr15	25395221	25396674	+	0	NA	Intergenic	Lx6|LINE|L1	52000	NR_027376	432939	Mm.146555	NM_001013791		Gm5468	100040583|EG432939	predicted gene 5468	ncRNA
unique_peak2-34753-8-10--0.454209200689727-1.078512453669	chr15	55006140	55006668	+	0	NA	intron (NM_145470, intron 3 of 8)	intron (NM_145470, intron 3 of 8)	41413	NM_001037937	97998	Mm.295397	NM_145470	ENSMUSG00000022419	Deptor	Depdc6	DEP domain containing MTOR-interacting protein	protein-coding
common_peak1-16775-52-109--0.673099723258961-2.26968434926812	chr6	37870599	37871825	+	0	NA	intron (NM_145076, intron 5 of 18)	L1MC|LINE|L1	20725	NM_001272076	21848	Mm.41063	NM_145076		Trim24	A130082H20Rik|AI447469|D430004I05Rik|TIF1|TIF1-alpha|TIF1alpha|Tif1a	tripartite motif-containing 24	protein-coding
common_peak2-27561-27-41--0.400771471883525-0.542588322087496	chr3	97226993	97228522	+	0	NA	Intergenic	MTEa|LTR|MaLR	-12655	NM_146275	258272	Mm.377406	NM_146275	ENSMUSG00000051392	Olfr1402	MOR217-1	olfactory receptor 1402	protein-coding
unique_peak2-38906-6-7--0.434601889619698-0.97990265578305	chr8	13615180	13615589	+	0	NA	intron (NM_009025, intron 2 of 23)	intron (NM_009025, intron 2 of 23)	-52923	NM_001080781	66501	Mm.46136	NM_025601	ENSMUSG00000031452	1700029H14Rik	-	RIKEN cDNA 1700029H14 gene	protein-coding
unique_peak1-5779-7-0-2.79909083029819-2.40823996531185	chr6	54282464	54282904	+	0	NA	intron (NR_033635, intron 3 of 13)	intron (NR_033635, intron 3 of 13)	5678	NM_030024	78004	Mm.41984	NM_030024	ENSMUSG00000045725	Prr15	E130201N16Rik|G90	proline rich 15	protein-coding
common_peak2-26151-6-5--0.0195643903408542-0.947717972411649	chr2	14744241	14744635	+	0	NA	intron (NM_023116, intron 2 of 13)	MER58B|DNA|MER1_type	-1281	NM_001252533	12296	Mm.313930	NM_023116	ENSMUSG00000057914	Cacnb2	AW060387|CAB2|Cavbeta2|Cchb2	calcium channel, voltage-dependent, beta 2 subunit	protein-coding
common_peak2-29260-38-84--0.837938276839171-2.46026992736357	chr5	140610718	140612397	+	0	NA	intron (NM_010752, intron 12 of 17)	intron (NM_010752, intron 12 of 17)	185949	NM_010752	17120	Mm.27250	NM_010752	ENSMUSG00000029554	Mad1l1	AI173502|AW550425|Mad1	MAD1 mitotic arrest deficient 1-like 1	protein-coding
unique_peak2-35192-7-8--0.370834171144123-1.00793137938329	chr16	57672131	57672600	+	0	NA	intron (NM_007739, intron 2 of 3)	intron (NM_007739, intron 2 of 3)	-65385	NM_025599	66497	Mm.425976	NM_025599		Cmss1	1110001A06Rik|2610528E23Rik|4930572F24Rik|AV099812|AV122629	cms small ribosomal subunit 1	protein-coding
unique_peak1-4213-20-9-1.16614668970383-1.52222891542741	chr2	119501018	119502030	+	0	NA	intron (NM_030112, intron 1 of 17)	intron (NM_030112, intron 1 of 17)	720	NM_030112	76246	Mm.33437	NM_030112	ENSMUSG00000027304	Rtf1	2900005O08Rik|6530416A09Rik|AI853581|AU043144|AW553985|Gtl7|cbp82	Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	protein-coding
unique_peak2-32923-6-9--0.75652998450706-1.11707584880836	chr10	24870010	24870504	+	0	NA	Intergenic	Intergenic	148712	NM_018747	432442	Mm.485937	NM_018747	ENSMUSG00000039166	Akap7	6430401D08|AI662165|AKAP15|Akap18|BB170514	A kinase (PRKA) anchor protein 7	protein-coding
common_peak1-12686-25-17-0.691924903902794-0.98872314135509	chr18	38865717	38866748	+	0	NA	Intergenic	B2_Mm1a|SINE|B2	-105310	NM_011898	24066	Mm.42038	NM_011898	ENSMUSG00000024427	Spry4	A030006O18Rik|sprouty4	sprouty homolog 4 (Drosophila)	protein-coding
common_peak1-12307-12-7-0.648775985087639-0.697979855752659	chr17	46875228	46875875	+	0	NA	intron (NM_028065, intron 3 of 5)	B1_Mur1|SINE|Alu	-9437	NM_010321	14711	Mm.29395	NM_010321	ENSMUSG00000002769	Gnmt	-	glycine N-methyltransferase	protein-coding
common_peak1-17974-13-14--0.12841856497075-0.301029995663977	chr7	133088417	133089251	+	0	NA	intron (NM_001101488, intron 3 of 6)	L1MB8|LINE|L1	137091	NM_001101488	269994	Mm.39599	NM_001101488	ENSMUSG00000046182	Gsg1l	AI852434|C230098I05Rik|G630023A01Rik|Gm637|g1l	GSG1-like	protein-coding
common_peak1-15578-15-10-0.552733131918359-0.604422558181019	chr4	127334775	127335555	+	0	NA	Intergenic	Intergenic	-299757	NM_010291	14622	Mm.26859	NM_010291	ENSMUSG00000042357	Gjb5	Cnx31.1|Cx31.1|Gjb-5	gap junction protein, beta 5	protein-coding
unique_peak2-33679-3-5--0.998945590680433-0.96108193396963	chr11	102424561	102424982	+	0	NA	Intergenic	RLTR15|LTR|ERVK	-7299	NM_001159492	237943	Mm.260282	NM_001159492	ENSMUSG00000034621	Gpatch8	5430405G24Rik|AU018890|ENSMUSG00000075516|Fbm1|Gpatc8|mKIAA0553	G patch domain containing 8	protein-coding
common_peak2-23488-13-11-0.193509529916613-0.379391706698377	chr15	75850891	75851509	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-6434	NM_134087	105732	Mm.267178	NM_134087	ENSMUSG00000046761	Fam83h	AA409316	family with sequence similarity 83, member H	protein-coding
unique_peak1-4473-12-1-2.64877598508764-3.36932189928148	chr2	181100366	181101081	+	0	NA	promoter-TSS (NR_028585)	promoter-TSS (NR_028585)	595	NM_001048148	229007	Mm.87720	NM_144894	ENSMUSG00000027582	Zgpat	1500006I01Rik|BC021513	zinc finger, CCCH-type with G patch domain	protein-coding
common_peak1-17686-11-8-0.338768582809301-1.14218153353838	chr7	67222520	67223111	+	0	NA	intron (NM_001082961, intron 1 of 10)	intron (NM_001082961, intron 1 of 10)	19679	NM_001082961	20646	Mm.274995	NM_013670	ENSMUSG00000000948	Snrpn	2410045I01Rik|HCERN3|Peg4|Pwcr1|SMN	small nuclear ribonucleoprotein N	protein-coding
unique_peak1-1216-12-1-2.64877598508764-3.36932189928148	chr11	106782503	106783000	+	0	NA	promoter-TSS (NM_025481)	promoter-TSS (NM_025481)	-722	NM_025481	66313	Mm.340955	NM_025481	ENSMUSG00000018363	Smurf2	2810411E22Rik|AI558114|AI649275	SMAD specific E3 ubiquitin protein ligase 2	protein-coding
unique_peak2-39268-2-5--1.50241675698448-1.08602067057793	chr8	120365609	120366042	+	0	NA	Intergenic	Intergenic	-39996	NM_026758	68533	Mm.181836	NM_026758	ENSMUSG00000031843	Mphosph6	1110001M01Rik|AA536809|C86426	M phase phosphoprotein 6	protein-coding
unique_peak2-34681-6-18--1.68252940306328-1.66449268468235	chr15	10981377	10982042	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-12836	NM_175501	239337	Mm.482727	NM_175501	ENSMUSG00000047497	Adamts12	ADAMTS-12|AI605170	a disintegrin-like and metallopeptidase (reprolysin type) with thrombospondin type 1 motif, 12	protein-coding
unique_peak2-39726-0-8--4.01005593191652-2.05605744720049	chr9	121656182	121656601	+	0	NA	intron (NM_010918, intron 12 of 16)	B4|SINE|B4	12670	NR_033503	320301	Mm.373883	NR_033503		E530011L22Rik	-	RIKEN cDNA E530011L22 gene	ncRNA
unique_peak2-34283-6-9--0.75652998450706-1.11707584880836	chr13	73328063	73328475	+	0	NA	Intergenic	Intergenic	-69676	NM_018885	50916	Mm.103784	NM_018885	ENSMUSG00000021604	Irx4	-	Iroquois related homeobox 4 (Drosophila)	protein-coding
common_peak1-10087-29-52--0.615630373948088-1.02702006187975	chr13	23745696	23746719	+	0	NA	Intergenic	Intergenic	29621	NM_178189	319164	Mm.261973	NM_178189	ENSMUSG00000069270	Hist1h2ac	-	histone cluster 1, H2ac	protein-coding
common_peak1-17264-33-21-0.871905943888232-1.60774463804084	chr6	134825411	134826789	+	0	NA	intron (NM_001167699, intron 1 of 1)	RSINE1|SINE|B4	11703	NR_074084	14760	Mm.4787	NM_008157	ENSMUSG00000032641	Gpr19	-	G protein-coupled receptor 19	protein-coding
common_peak2-21258-9-8-0.0196884049619079-1.03275496310833	chr11	69415726	69416202	+	0	NA	exon (NM_013415, exon 5 of 7)	exon (NM_013415, exon 5 of 7)	3498	NM_013415	11932	Mm.235204	NM_013415	ENSMUSG00000041329	Atp1b2	Amog|Atpb-2	ATPase, Na+/K+ transporting, beta 2 polypeptide	protein-coding
common_peak1-16522-20-32--0.55631933476726-0.705485015404196	chr5	140791129	140791910	+	0	NA	intron (NM_010752, intron 1 of 17)	B1_Mur4|SINE|Alu	5987	NM_010752	17120	Mm.27250	NM_010752	ENSMUSG00000029554	Mad1l1	AI173502|AW550425|Mad1	MAD1 mitotic arrest deficient 1-like 1	protein-coding
common_peak2-27784-18-22--0.210642804828661-0.321718508207525	chr3	135521935	135522994	+	0	NA	intron (NM_001135149, intron 6 of 8)	intron (NM_001135149, intron 6 of 8)	-19231	NR_040540	71038	Mm.410798	NR_040540		4933401H06Rik	-	RIKEN cDNA 4933401H06 gene	ncRNA
common_peak1-15071-18-10-0.853487532591054-1.03889213727317	chr3	126609429	126610358	+	0	NA	Intergenic	L1Md_A|LINE|L1	36411	NM_001034168	109676	Mm.220242	NM_178655	ENSMUSG00000032826	Ank2	AI835472|AW491075|Ank-2	ankyrin 2, brain	protein-coding
unique_peak1-1515-8-4-0.683294323060208-1.21878474469819	chr13	5857834	5858343	+	0	NA	promoter-TSS (NR_045891)	promoter-TSS (NR_045891)	-750	NR_045891	71867	Mm.179181	NR_045891		1700016G22Rik	-	RIKEN cDNA 1700016G22 gene	ncRNA
unique_peak1-5107-17-6-1.41094141614743-1.84350559086818	chr4	153974345	153975057	+	0	NA	intron (NM_027504, intron 1 of 16)	intron (NM_027504, intron 1 of 16)	35775	NR_045643	320939	Mm.436738	NR_045643		5930403L14Rik	-	RIKEN cDNA 5930403L14 gene	ncRNA
common_peak2-23413-86-147--0.233817571596597-0.6521530625992	chr15	59647151	59650128	+	0	NA	Intergenic	B4A|SINE|B4	-22125	NR_045076	100503021	Mm.402924	NR_045076		Gm19510	-	predicted gene, 19510	ncRNA
unique_peak1-5453-13-4-1.45654393575041-2.23384849113406	chr5	121454780	121455383	+	0	NA	intron (NM_011286, intron 2 of 21)	intron (NM_011286, intron 2 of 21)	4446	NM_011286	19894	Mm.181166	NM_011286	ENSMUSG00000029608	Rph3a	2900002P20Rik|AU022689|AW108370	rabphilin 3A	protein-coding
common_peak1-12819-17-18--0.0296311752385474-0.306899554715732	chr18	67933785	67934537	+	0	NA	promoter-TSS (NM_028112)	promoter-TSS (NM_028112)	-369	NM_028112	72124	Mm.307315	NM_028112	ENSMUSG00000079614	Seh1l	2610007A16Rik|AW540070|SEC13L|SEH1A|SEH1B|Seh1	SEH1-like (S. cerevisiae	protein-coding
unique_peak2-36842-11-21--0.950738034385684-0.991115276827166	chr3	89090202	89090751	+	0	NA	Intergenic	Intergenic	-5603	NM_001162425	13636	Mm.15675	NM_010107	ENSMUSG00000027954	Efna1	AI325262|B61|Efl1|Epl1|Eplg1|Lerk1	ephrin A1	protein-coding
unique_peak1-6150-20-4-2.16614668970383-3.28004177908661	chr6	135333839	135334748	+	0	NA	Intergenic	B4A|SINE|B4	16782	NM_001288627	13730	Mm.182785	NM_010128	ENSMUSG00000030208	Emp1	I-8-09|TMP	epithelial membrane protein 1	protein-coding
common_peak2-20972-10-24--1.28744084476596-1.59083646988122	chr11	20543274	20543929	+	0	NA	intron (NM_001038625, intron 1 of 1)	(TTTTG)n|Simple_repeat|Simple_repeat	11621	NM_001038625	58172	Mm.339676	NM_021372	ENSMUSG00000049800	Sertad2	AB041541|AU021878|Kiaa0127|SEI-2|Sei2|TRIP-Br2|mKIAA0127	SERTA domain containing 2	protein-coding
common_peak2-24117-35-45--0.092191697594509-0.310901174692144	chr16	33251158	33252240	+	0	NA	intron (NM_080557, intron 1 of 13)	CpG	157	NM_080557	69150	Mm.28196	NM_080557	ENSMUSG00000022808	Snx4	1810036H14Rik|AI037066	sorting nexin 4	protein-coding
unique_peak2-35380-2-8--2.08737925770563-1.65811743852845	chr17	29155839	29156261	+	0	NA	Intergenic	Intergenic	-11168	NM_134115	106504	Mm.439986	NM_134115	ENSMUSG00000024006	Stk38	5830476G13Rik|9530097A09Rik|AA617404|Ndr1	serine/threonine kinase 38	protein-coding
unique_peak1-6989-18-9-0.990991056340989-1.23014042908325	chr8	120497934	120499086	+	0	NA	Intergenic	MLT1H|LTR|MaLR	-172681	NM_026758	68533	Mm.181836	NM_026758	ENSMUSG00000031843	Mphosph6	1110001M01Rik|AA536809|C86426	M phase phosphoprotein 6	protein-coding
common_peak2-22290-72-61-0.714387502485443-2.56467722642014	chr13	14038915	14039993	+	0	NA	Intergenic	L1_Mm|LINE|L1	-7487	NM_178640	97884	Mm.21686	NM_178640	ENSMUSG00000039242	B3galnt2	A930105D20Rik|C80633|D230016N13Rik	UDP-GalNAc:betaGlcNAc beta 1,3-galactosaminyltransferase, polypeptide 2	protein-coding
common_peak1-9074-8-7-0.00522241794757061-1.00793137938329	chr11	69415782	69416295	+	0	NA	intron (NM_013415, intron 4 of 6)	intron (NM_013415, intron 4 of 6)	3424	NM_013415	11932	Mm.235204	NM_013415	ENSMUSG00000041329	Atp1b2	Amog|Atpb-2	ATPase, Na+/K+ transporting, beta 2 polypeptide	protein-coding
unique_peak1-7199-11-5-0.923731083530457-1.477227296591	chr9	66181218	66181720	+	0	NA	Intergenic	Intergenic	-16788	NM_145617	235439	Mm.244179	NM_145617	ENSMUSG00000038664	Herc1	2810449H11Rik|B230218H07|D130015N03Rik|tbl	hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 1	protein-coding
unique_peak2-37097-0-5--3.42509343119537-1.32905871926422	chr3	154473183	154473616	+	0	NA	intron (NM_177066, intron 23 of 24)	intron (NM_177066, intron 23 of 24)	99302	NM_175176	209601	Mm.331454	NM_175176	ENSMUSG00000042943	Erich3	1700013E18Rik|4922501L14Rik|5031409G23Rik|AI596448|Gm133	glutamate rich 3	protein-coding
common_peak1-9303-15-14-0.105274154947137-0.330004445983672	chr11	93967683	93968362	+	0	NA	exon (NM_001025429, exon 22 of 27)	exon (NM_001025429, exon 22 of 27)	62503	NM_001025429	70834	Mm.260737	NM_027569	ENSMUSG00000020859	Spag9	3110018C07Rik|4733401I23Rik|4831406C20Rik|AW552012|JLP|JSAP2|JSAP2a|Jip4|Mapk8ip4|syd1	sperm associated antigen 9	protein-coding
unique_peak1-4623-9-4-0.867685311516858-1.36011389749466	chr3	75942101	75942563	+	0	NA	intron (NM_001253719, intron 1 of 15)	Lx8|LINE|L1	62827	NM_001253719	213262	Mm.379337	NM_178673	ENSMUSG00000034098	Fstl5	9130207J01Rik	follistatin-like 5	protein-coding
unique_peak2-39717-0-5--3.42509343119537-1.32905871926422	chr9	119432913	119433155	+	0	NA	intron (NM_001253860, intron 13 of 26)	intron (NM_001253860, intron 13 of 26)	38762	NM_001253860	20271	Mm.103584	NM_021544	ENSMUSG00000032511	Scn5a	Nav1.5|Nav1.5c|SkM1|SkM2|mH1	sodium channel, voltage-gated, type V, alpha	protein-coding
unique_peak2-33814-2-6--1.72480917832092-1.26211192963361	chr12	112721548	112721938	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	2291	NM_001033248	212539	Mm.81916	NM_001033248	ENSMUSG00000010529	Gm266	-	predicted gene 266	protein-coding
unique_peak2-33539-2-6--1.72480917832092-1.26211192963361	chr11	78160144	78160502	+	0	NA	intron (NM_011676, intron 1 of 4)	intron (NM_011676, intron 1 of 4)	3299	NM_011676	22248	Mm.284811	NM_011676	ENSMUSG00000002058	Unc119	D11Bhm52|HRG4|MRG4|Rg4|Rtg4|Unc119h	unc-119 homolog (C. elegans)	protein-coding
common_peak1-19319-28-18-0.805031606377877-1.27334590136207	chr9	123215213	123216480	+	0	NA	Intergenic	Intergenic	-45939	NM_001002267	72309	Mm.8569	NM_001002267	ENSMUSG00000054871	Tmem158	2310037P21Rik|Ris1	transmembrane protein 158	protein-coding
common_peak1-16232-17-34--0.910986678739929-1.23560027455358	chr5	100820392	100820995	+	0	NA	intron (NM_026969, intron 11 of 27)	intron (NM_026969, intron 11 of 27)	24560	NM_026969	69162	Mm.18634	NM_026969	ENSMUSG00000035325	Sec31a	1810024J13Rik|ABP125|ABP130|AU042160|HSPC275|Sec31l1	Sec31 homolog A (S. cerevisiae)	protein-coding
common_peak1-13320-45-40-0.502806020726788-1.02303743263849	chr19	42612286	42613450	+	0	NA	intron (NM_177464, intron 1 of 6)	intron (NM_177464, intron 1 of 6)	19573	NM_177464	52013	Mm.254169	NM_177464	ENSMUSG00000025184	R3hcc1l	1700036B12Rik|AI450607|C10orf28|D19Ertd386e|GIDRP86|Gidrp88	R3H domain and coiled-coil containing 1 like	protein-coding
common_peak1-14171-24-42--0.633054851934381-0.913161965438649	chr2	140763001	140763924	+	0	NA	intron (NM_001013802, intron 4 of 18)	MIRc|SINE|MIR	-266250	NM_178382	71436	Mm.426781	NM_178382	ENSMUSG00000051379	Flrt3	5530600M07Rik|C430047I10Rik|mKIAA1469	fibronectin leucine rich transmembrane protein 3	protein-coding
unique_peak2-37759-3-6--1.22133801201688-1.08602067057793	chr5	114377507	114377825	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-18951	NM_011779	23790	Mm.260158	NM_011779	ENSMUSG00000004530	Coro1c	AL022675|AW455561|AW548837	coronin, actin binding protein 1C	protein-coding
common_peak2-30845-31-37--0.0226888426304619-0.301029995663945	chr7	133636954	133637616	+	0	NA	exon (NM_183020, exon 19 of 23)	exon (NM_183020, exon 19 of 23)	6416	NM_001163713	233870	Mm.197829	NM_172745	ENSMUSG00000073838	Tufm	2300002G02Rik|C76308|C76389|EF-TuMT|EFTU	Tu translation elongation factor, mitochondrial	protein-coding
common_peak1-15711-20-14-0.581184188982674-0.690311289528838	chr4	141139013	141139969	+	0	NA	intron (NM_133754, intron 6 of 8)	ID_B1|SINE|B4	16348	NM_001163256	74202	Mm.490327	NM_133754	ENSMUSG00000006219	Fblim1	2410043F08Rik|Cal|Fblp1|Gt10|migfilin|migfilin(s)	filamin binding LIM protein 1	protein-coding
unique_peak1-3740-14-5-1.31425365963649-1.4372489031793	chr19	47302377	47303134	+	0	NA	promoter-TSS (NM_001163480)	promoter-TSS (NM_001163480)	-578	NM_001163480	18011	Mm.313651	NM_021360	ENSMUSG00000006435	Neurl1a	2410129E16Rik|AI450910|AI481072|Neu1|Neur1|Neurl|Neurl1|Nlz|Rnf67	neuralized homolog 1A (Drosophila)	protein-coding
common_peak2-29921-12-10-0.189344366450341-0.386243247519795	chr6	115499389	115499920	+	0	NA	intron (NM_199033, intron 2 of 11)	(CA)n|Simple_repeat|Simple_repeat	4932	NM_199033	381802	Mm.291208	NM_199033	ENSMUSG00000042389	Tsen2	AU067695	tRNA splicing endonuclease 2 homolog (S. cerevisiae)	protein-coding
unique_peak1-1577-24-8-1.6232849013254-2.85636458546265	chr13	31577185	31578012	+	0	NA	Intergenic	L2a|LINE|L2	-72441	NM_008239	15220	Mm.44235	NM_008239	ENSMUSG00000038415	Foxq1	HFH-1|Hfh1|Hfh1l|sa	forkhead box Q1	protein-coding
unique_peak1-5061-7-1-1.79909083029819-1.80617997398389	chr4	137286272	137286621	+	0	NA	TTS (NM_001256218)	TTS (NM_001256218)	35944	NM_001287172	11647	Mm.288186	NM_007431	ENSMUSG00000028766	Alpl	APTNAP|Akp-2|Akp2|TNAP|TNSALP	alkaline phosphatase, liver/bone/kidney	protein-coding
common_peak1-11677-53-87--0.318458606221369-0.653467308648399	chr16	27388402	27389737	+	0	NA	promoter-TSS (NM_001025615)	promoter-TSS (NM_001025615)	27	NM_001289436	67501	Mm.258985	NM_026202	ENSMUSG00000038127	Ccdc50	C3orf6	coiled-coil domain containing 50	protein-coding
common_peak2-26477-11-6-0.701338662194009-1.32595962126035	chr2	78412705	78413040	+	0	NA	Intergenic	RMER15|LTR|ERVL	-296332	NM_009454	22193	Mm.1485	NM_009454		Ube2e3	Ubce4|ubcM2	ubiquitin-conjugating enzyme E2E 3	protein-coding
common_peak2-23350-47-48-0.320131580651339-0.638510577194945	chr15	41446936	41447983	+	0	NA	intron (NM_001130166, intron 2 of 16)	intron (NM_001130166, intron 2 of 16)	-23920	NR_106195	102465902		NR_106195		Mir8115	mmu-mir-8115	microRNA mir-8115	ncRNA
common_peak1-15321-16-9-0.796335547380699-0.844317084070804	chr4	45966489	45967299	+	0	NA	Intergenic	MLT1A0|LTR|MaLR	-11313	NM_001290475	100121	Mm.275413	NM_146142	ENSMUSG00000035517	Tdrd7	5730495N10Rik|AI447470|PCTAIRE2BP	tudor domain containing 7	protein-coding
common_peak1-16799-15-10-0.552733131918359-0.604422558181019	chr6	43525402	43526207	+	0	NA	intron (NM_013861, intron 3 of 8)	intron (NM_013861, intron 3 of 8)	90370	NM_013861	29807	Mm.320979	NM_013861	ENSMUSG00000029735	Tpk1	-	thiamine pyrophosphokinase	protein-coding
common_peak2-22536-17-14-0.311405742596519-0.466170754204149	chr13	55727056	55727844	+	0	NA	intron (NM_007596, intron 2 of 3)	B3|SINE|B2	3084	NM_007596	12328	Mm.2313	NM_007596	ENSMUSG00000021501	Caml	AI385748|Camlg	calcium modulating ligand	protein-coding
unique_peak1-1258-7-7--0.200909169701811-0.97990265578305	chr11	116533075	116533537	+	0	NA	promoter-TSS (NR_028569)	promoter-TSS (NR_028569)	332	NR_027820	66293	Mm.432051	NM_025472	ENSMUSG00000020812	1810032O08Rik	-	RIKEN cDNA 1810032O08 gene	ncRNA
unique_peak1-5412-14-2-2.31425365963649-3.28500101358144	chr5	108079478	108080087	+	0	NA	intron (NM_144911, intron 11 of 12)	intron (NM_144911, intron 11 of 12)	-16913	NR_046195	78443	Mm.490703	NR_046195	ENSMUSG00000085900	A930041C12Rik	-	RIKEN cDNA A930041C12 gene	ncRNA
common_peak2-20990-10-15--0.643584654991231-0.519648556297791	chr11	22843812	22844520	+	0	NA	intron (NM_144514, intron 2 of 2)	intron (NM_144514, intron 2 of 2)	-27839	NM_011663	22183	Mm.29542	NM_011663	ENSMUSG00000044068	Zrsr1	D11Ncvs75|Irlgs2|SP2|U2af1-rs1|U2afbp-rs	zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1	protein-coding
unique_peak2-38421-5-6--0.511735258063458-0.947717972411649	chr7	25250297	25250701	+	0	NA	intron (NM_011113, intron 2 of 6)	B3A|SINE|B2	2980	NM_011113	18793	Mm.1359	NM_011113	ENSMUSG00000046223	Plaur	Cd87|u-PAR|uPAR	plasminogen activator, urokinase receptor	protein-coding
common_peak1-9771-19-6-1.59533240460408-2.21753093801298	chr12	55473171	55473860	+	0	NA	Intergenic	Intergenic	18790	NR_033689	665239	Mm.26856	NR_033689		Gm7550	EG665239|Gm666	predicted gene 7550	ncRNA
common_peak2-20462-67-72-0.354586923902978-0.882982443493697	chr10	43478228	43480515	+	0	NA	intron (NR_040581, intron 1 of 3)	Arthur1A|DNA|Tip100	13407	NR_040581	69443	Mm.484042	NR_040581		1700027J07Rik	-	RIKEN cDNA 1700027J07 gene	ncRNA
unique_peak1-3006-9-5-0.604650905683064-1.21398586181642	chr17	84117635	84118209	+	0	NA	intron (NM_001171053, intron 3 of 13)	B3|SINE|B2	12419	NM_001171052	116871	Mm.277668	NM_054082	ENSMUSG00000055817	Mta3	1110002J22Rik|mKIAA1266	metastasis associated 3	protein-coding
unique_peak2-39309-3-6--1.22133801201688-1.08602067057793	chr8	124330388	124330709	+	0	NA	intron (NM_145605, intron 5 of 11)	intron (NM_145605, intron 5 of 11)	22921	NM_145605	234825	Mm.209329	NM_145605	ENSMUSG00000040263	Klhdc4	AA408426|AV352552|BC012312|G430025P05Rik	kelch domain containing 4	protein-coding
common_peak2-31136-28-37--0.194968393622123-0.350690697593776	chr8	34952364	34953861	+	0	NA	intron (NM_001042674, intron 4 of 7)	intron (NM_001042674, intron 4 of 7)	87223	NM_019733	19663	Mm.323997	NM_019733	ENSMUSG00000031586	Rbpms	2010300K22Rik|2700019M19Rik|AU017537|RBP-MS|hermes	RNA binding protein gene with multiple splicing	protein-coding
unique_peak2-36810-4-10--1.48289213249054-1.5150158574804	chr3	84479365	84479923	+	0	NA	intron (NM_177260, intron 1 of 6)	intron (NM_177260, intron 1 of 6)	9530	NM_177260	320782	Mm.107370	NM_177260	ENSMUSG00000056498	Tmem154	9930117H01Rik	transmembrane protein 154	protein-coding
common_peak2-30259-13-12-0.0780323124966764-0.334470287753051	chr7	13024211	13024842	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-16686	NM_001033820	619331	Mm.361832	NM_001033820	ENSMUSG00000034071	Zfp551	9630004E07Rik|Znf551	zinc fingr protein 551	protein-coding
common_peak1-9995-29-31-0.112290080615111-0.353704024845522	chr13	65240667	65241978	+	0	NA	Intergenic	Intergenic	-12212	NM_146819	258816	Mm.377705	NM_146819	ENSMUSG00000049806	Olfr466	MOR209-1	olfactory receptor 466	protein-coding
common_peak1-17000-10-11--0.228547155712387-0.31137425193576	chr6	88963745	88964279	+	0	NA	Intergenic	Intergenic	-82097	NM_175017	232217	Mm.281744	NM_175017	ENSMUSG00000055403	4933427D06Rik	-	RIKEN cDNA 4933427D06 gene	protein-coding
common_peak1-9914-11-8-0.338768582809301-1.14218153353838	chr12	88360435	88361065	+	0	NA	Intergenic	L1MCa|LINE|L1	-6764	NM_172583	217733	Mm.110032	NM_172583	ENSMUSG00000034145	Tmem63c	4932420N09|9330187M14Rik	transmembrane protein 63c	protein-coding
common_peak2-23166-26-37--0.320028421285123-0.460129356264038	chr14	122107074	122107885	+	0	NA	intron (NM_134074, intron 1 of 52)	intron (NM_134074, intron 1 of 52)	-9840	NM_001081039	105445	Mm.441054	NM_134074	ENSMUSG00000025558	Dock9	AA959601|AW538057|B230309H04Rik|D14Wsu89e|Zizimin1|mKIAA1058	dedicator of cytokinesis 9	protein-coding
common_peak2-28802-12-7-0.648775985087639-0.697979855752659	chr5	64808043	64808431	+	0	NA	Intergenic	ORR1A2-int|LTR|MaLR	50944	NR_040681	69999	Mm.261413	NR_040681		1700027F09Rik	-	RIKEN cDNA 1700027F09 gene	ncRNA
unique_peak1-6888-17-1-3.21829633820504-4.59734841376773	chr8	94340931	94341564	+	0	NA	Intergenic	Intergenic	-15694	NM_008393	16373	Mm.238044	NM_008393	ENSMUSG00000031734	Irx3	AI894186	Iroquois related homeobox 3	protein-coding
common_peak1-12677-46-18-1.65006842980522-5.48197076247517	chr18	37883543	37884594	+	0	NA	intron (NM_033576, intron 1 of 3)	intron (NM_033576, intron 1 of 3)	-1292	NM_033591	93716	Mm.247203	NM_033591	ENSMUSG00000023036	Pcdhga8	mKIAA4054	protocadherin gamma subfamily A, 8	protein-coding
common_peak2-20293-5-6--0.511735258063458-0.947717972411649	chr1	193397096	193397503	+	0	NA	intron (NM_029766, intron 1 of 14)	Charlie2b|DNA|MER1_type	2114	NM_029766	76843	Mm.189102	NM_029766	ENSMUSG00000037474	Dtl	2810047L02Rik|5730564G15Rik|Ramp	denticleless homolog (Drosophila)	protein-coding
common_peak2-31192-11-24--1.13516260552311-1.3750876294627	chr8	57488014	57488687	+	0	NA	Intergenic	Intergenic	897411	NM_175939	244486	Mm.67684	NM_175939	ENSMUSG00000046258	Adam29	-	a disintegrin and metallopeptidase domain 29	protein-coding
unique_peak1-1189-12-5-1.06381348436648-1.78669045979184	chr11	101604440	101605103	+	0	NA	intron (NM_144831, intron 10 of 22)	intron (NM_144831, intron 10 of 22)	10501	NM_144831	217207	Mm.28186	NM_144831	ENSMUSG00000034931	Dhx8	Ddx8|mDEAH6|mKIAA4096	DEAH (Asp-Glu-Ala-His) box polypeptide 8	protein-coding
unique_peak1-6199-14-2-2.31425365963649-3.28500101358144	chr6	149093291	149093941	+	0	NA	intron (NM_001252096, intron 2 of 3)	MTD|LTR|MaLR	3581	NM_177101	320204	Mm.274099	NM_177101	ENSMUSG00000039958	Mettl20	4833442J19Rik|AI256744	methyltransferase like 20	protein-coding
common_peak1-15495-26-45--0.595662863898551-0.956885677565398	chr4	109676033	109677260	+	0	NA	Intergenic	Intergenic	26016	NM_172296	242620	Mm.32825	NM_172296	ENSMUSG00000047143	Dmrta2	Dmrt5	doublesex and mab-3 related transcription factor like family A2	protein-coding
common_peak1-11600-12-15--0.351224014912361-0.332077462497413	chr16	17619205	17619741	+	0	NA	promoter-TSS (NM_029945)	promoter-TSS (NM_029945)	26	NM_001164609	77626	Mm.34659	NM_029945	ENSMUSG00000005899	Smpd4	4122402O22Rik|mKIAA1418	sphingomyelin phosphodiesterase 4	protein-coding
unique_peak1-4635-10-5-0.771452844287613-1.33892459842472	chr3	87144733	87145279	+	0	NA	Intergenic	Lx8|LINE|L1	-16797	NM_009690	11801	Mm.6676	NM_009690	ENSMUSG00000015854	Cd5l	1/6|AAC-11|AI047839|Api6|CT2|Pdp|Sp-alpha	CD5 antigen-like	protein-coding
common_peak2-24718-11-7-0.508693584251613-1.21681515183528	chr17	46772862	46773294	+	0	NA	intron (NM_029091, intron 9 of 15)	intron (NM_029091, intron 9 of 15)	-6625	NM_175168	71461	Mm.181833	NM_175168	ENSMUSG00000023972	Ptk7	8430404F20Rik|chz|mPTK7/CCK4	PTK7 protein tyrosine kinase 7	protein-coding
unique_peak1-1768-10-1-2.35641534500877-2.57096726280955	chr13	112070298	112070849	+	0	NA	Intergenic	Intergenic	25352	NM_175497	238880	Mm.107293	NM_175497	ENSMUSG00000055194	Actbl2	4732495G21Rik	actin, beta-like 2	protein-coding
unique_peak2-33206-4-8--1.19338551529556-1.21878474469819	chr10	111972767	111973140	+	0	NA	Intergenic	B4A|SINE|B4	-191029	NR_040579	69355	Mm.84337	NR_040579		1700010J16Rik	-	RIKEN cDNA 1700010J16 gene	ncRNA
unique_peak1-3909-18-4-1.99099105634099-2.82951996911245	chr2	24336327	24337190	+	0	NA	Intergenic	Intergenic	-5639	NM_011040	18510	Mm.2533	NM_011040	ENSMUSG00000026976	Pax8	Pax-8	paired box 8	protein-coding
common_peak2-24981-18-38--0.972483067633897-1.53432270224293	chr18	9212013	9213143	+	0	NA	promoter-TSS (NM_008058)	promoter-TSS (NM_008058)	-276	NM_008058	14370	Mm.184289	NM_008058	ENSMUSG00000036904	Fzd8	Fz8	frizzled homolog 8 (Drosophila)	protein-coding
common_peak2-29224-19-18-0.154759813218101-0.351190433797598	chr5	137785787	137786673	+	0	NA	Intergenic	Intergenic	-5107	NM_001159571	13846	Mm.34533	NM_010144	ENSMUSG00000029710	Ephb4	AI042935|Htk|MDK2|Myk1|Tyro11	Eph receptor B4	protein-coding
unique_peak1-3986-10-5-0.771452844287613-1.33892459842472	chr2	34608866	34609352	+	0	NA	intron (NM_025709, intron 2 of 26)	intron (NM_025709, intron 2 of 26)	1643	NM_025709	66691	Mm.156452	NM_025709	ENSMUSG00000026867	Gapvd1	2010005B09Rik|4432404J10Rik|AW108497|Gapex-5|RAP6|RME-6|mKIAA1521	GTPase activating protein and VPS9 domains 1	protein-coding
common_peak1-18649-12-8-0.478850983645327-0.562038191119709	chr8	111716856	111717409	+	0	NA	Intergenic	Intergenic	147676	NR_002928	384864	Mm.390083	NR_002928		Gm1943	-	WD repeat domain 70 pseudogene	pseudo
common_peak2-31531-98-70-1.05202157392587-6.3652878185968	chr8	110846149	110847604	+	0	NA	Intergenic	L1Md_F2|LINE|L1	261701	NR_077224	109215	Mm.65282	NR_077224		3010033K07Rik	-	RIKEN cDNA 3010033K07 gene	ncRNA
common_peak2-20240-19-14-0.495796731053168-0.607095980551316	chr1	182409077	182409621	+	0	NA	intron (NM_001081227, intron 1 of 3)	intron (NM_001081227, intron 1 of 3)	4286	NM_001081227	381310	Mm.44791	NM_001081227	ENSMUSG00000053963	6330403A02Rik	ENSMUSG00000056615|Gm10001|R75555	RIKEN cDNA 6330403A02 gene	protein-coding
common_peak1-12703-35-20-1.03905283568374-2.16720861012098	chr18	44824374	44825638	+	0	NA	intron (NR_026853, intron 1 of 4)	MTD|LTR|MaLR	-3086	NM_001085374	328949	Mm.312511	NM_001033406	ENSMUSG00000071856	Mcc	D18Ertd451e|E330037C19	mutated in colorectal cancers	protein-coding
common_peak2-32181-22-27--0.160070816970199-0.317737750275047	chr9	114401084	114401671	+	0	NA	exon (NM_009916, exon 2 of 2)	exon (NM_009916, exon 2 of 2)	4285	NM_009916	12773	Mm.1337	NM_009916	ENSMUSG00000047898	Ccr4	C-C CKR-4|CHEMR1|Cmkbr4|LESTR|Sdf1r	chemokine (C-C motif) receptor 4	protein-coding
common_peak2-26975-8-9--0.316705676939792-1.03275496310833	chr2	167413289	167413679	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	44021	NM_023230	66589	Mm.278783	NM_023230	ENSMUSG00000078923	Ube2v1	0610011J09Rik|AI256840|CROC-1|CROC1|D7Bwg1382e|UEV-1	ubiquitin-conjugating enzyme E2 variant 1	protein-coding
common_peak2-19558-33-38-0.0459353436632801-0.312166972154323	chr1	7088152	7089623	+	0	NA	intron (NM_183028, intron 1 of 5)	MT2B|LTR|ERVL	9886	NM_183028	319263	Mm.21539	NM_183028	ENSMUSG00000051285	Pcmtd1	8430411F12Rik|A030012M09Rik	protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1	protein-coding
common_peak1-11892-51-86--0.368019670246155-0.814709005062661	chr16	97961624	97963041	+	0	NA	Intergenic	Intergenic	23030	NM_023663	72388	Mm.35290	NM_023663	ENSMUSG00000005251	Ripk4	2310069J12Rik|AI552420|ANKK2|Ankrd3|DIk|PKK|RIP4	receptor-interacting serine-threonine kinase 4	protein-coding
common_peak2-30401-7-22--1.72447112575882-2.07034318903805	chr7	34966908	34967696	+	0	NA	Intergenic	B4A|SINE|B4	-13754	NM_016682	50995	Mm.27560	NM_016682	ENSMUSG00000052997	Uba2	AA986091|Arx|Sae2|UBA1|Ubl1a2|Uble1b	ubiquitin-like modifier activating enzyme 2	protein-coding
unique_peak1-3795-11-12--0.191746133889479-0.310474156842889	chr19	57273484	57274145	+	0	NA	intron (NM_001290813, intron 1 of 20)	intron (NM_001290813, intron 1 of 20)	-1693	NM_001290816	226251	Mm.217161	NM_178688	ENSMUSG00000025085	Ablim1	2210411C18Rik|2610209L21Rik|4833406P10Rik|9330196J19Rik|AV079770|AW060987|AW215784|Limab1|mKIAA0059	actin-binding LIM protein 1	protein-coding
common_peak1-14248-42-64--0.280038485161271-0.485273987300002	chr2	154656929	154658057	+	0	NA	intron (NM_023130, intron 2 of 8)	intron (NM_023130, intron 2 of 8)	40647	NM_001139511	19383	Mm.221440	NM_023130	ENSMUSG00000027593	Raly	AI663842|Merc	hnRNP-associated with lethal yellow	protein-coding
common_peak2-19950-33-40--0.026214442092555-0.301029995663988	chr1	131910279	131911187	+	0	NA	intron (NM_172485, intron 15 of 27)	Lx5|LINE|L1	408843	NM_007827	13137	Mm.436759	NM_007827	ENSMUSG00000026401	Daf2	AI323748|Cd55b|Daf|Daf-TM|TM-DAF	decay accelerating factor 2	protein-coding
common_peak2-20993-40-52--0.0689447718121006-0.303138254425616	chr11	22990343	22991091	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	77330	NM_028672	73873	Mm.252406	NM_028672	ENSMUSG00000049811	Fam161a	4930430E16Rik	family with sequence similarity 161, member A	protein-coding
common_peak2-27671-9-9--0.132314688483142-1.03275496310833	chr3	113243888	113244485	+	0	NA	Intergenic	Intergenic	33494	NM_007446	11722	Mm.439727	NM_007446	ENSMUSG00000074264	Amy1	Amy-1|Amy1a|C030014B17Rik	amylase 1, salivary	protein-coding
common_peak2-31730-54-69-0.0438027446847675-0.314891503798722	chr9	13748431	13749951	+	0	NA	Intergenic	RLTR14|LTR|ERV1	117020	NM_176836	72826	Mm.246174	NM_176836	ENSMUSG00000037808	Fam76b	2810485I05Rik|C78303	family with sequence similarity 76, member B	protein-coding
common_peak2-27653-31-49--0.418617518961601-0.665814527695537	chr3	108145411	108146360	+	0	NA	intron (NM_019972, intron 11 of 19)	L1MA9|LINE|L1	-21944	NM_026831	68753	Mm.75201	NM_026831	ENSMUSG00000068745	Mybphl	1110037P11Rik	myosin binding protein H-like	protein-coding
common_peak1-15217-16-22--0.405298313788951-0.440610794044987	chr4	135675807	135676533	+	0	NA	Intergenic	Intergenic	-23567	NM_008321	15903	Mm.110	NM_008321		Id3	Hlh462|Idb3|bHLHb25	inhibitor of DNA binding 3	protein-coding
common_peak1-13233-33-24-0.687481372750804-1.17890083738705	chr19	28989484	28991008	+	0	NA	Intergenic	Intergenic	-48164	NM_028922	74411	Mm.441887	NM_028922	ENSMUSG00000040105	Ppapdc2	4932443D16Rik	phosphatidic acid phosphatase type 2 domain containing 2	protein-coding
common_peak1-16010-25-20-0.469532482566345-0.662033714151238	chr5	34573744	34574512	+	0	NA	intron (NM_001015039, intron 6 of 12)	intron (NM_001015039, intron 6 of 12)	-43769	NM_010753	17122	Mm.259260	NM_010753	ENSMUSG00000037235	Mxd4	2810410A03Rik|Mad4|bHLHc12	Max dimerization protein 4	protein-coding
common_peak1-10033-8-17--1.16470258349474-1.02063122982878	chr13	13538734	13539243	+	0	NA	intron (NM_010917, intron 1 of 19)	RLTR28|LTR|ERVL	9119	NM_010917	18073	Mm.4691	NM_010917	ENSMUSG00000005397	Nid1	A630025O17|Nid|entactin|entactin-1|nidogen-1	nidogen 1	protein-coding
common_peak1-8095-22-12-0.946844386946312-1.31435121412491	chr1	180980773	180981884	+	0	NA	intron (NM_027188, intron 8 of 11)	intron (NM_027188, intron 8 of 11)	466806	NM_027188	69726	Mm.222338	NM_027188		Smyd3	2410008A19Rik|Zmynd1	SET and MYND domain containing 3	protein-coding
common_peak2-22566-16-11-0.533301141546906-0.58239619684445	chr13	63563638	63564273	+	0	NA	Intergenic	Intergenic	-30902	NM_001282942	14088	Mm.126106	NM_007985	ENSMUSG00000021461	Fancc	Facc	Fanconi anemia, complementation group C	protein-coding
common_peak2-24134-27-18-0.743618437451651-1.1637339601586	chr16	35870952	35871622	+	0	NA	exon (NM_001039530, exon 1 of 17)	exon (NM_001039530, exon 1 of 17)	181	NM_001039530	547253	Mm.244406	NM_001039530	ENSMUSG00000034422	Parp14	1600029O10Rik|ARTD8|BC021340|CoaSt6|mKIAA1268	poly (ADP-ribose) polymerase family, member 14	protein-coding
common_peak1-10677-9-11--0.395349094316936-0.344532117358383	chr14	54184665	54185190	+	0	NA	Intergenic	MMERGLN-int|LTR|ERV1	-100688	NM_001205242	100568452	Mm.213248	NM_001205242		A430107P09Rik	Va10	RIKEN cDNA A430107P09 gene	protein-coding
unique_peak2-34544-10-9-0.0344872501214071-1.05503135781948	chr14	57338675	57339084	+	0	NA	Intergenic	Intergenic	-19042	NR_046210	100503823	Mm.474486	NR_046209		Gm16973	-	predicted gene, 16973	ncRNA
common_peak2-19767-70-112--0.200212046039789-0.503851147901832	chr1	80339507	80341424	+	0	NA	Intergenic	Intergenic	-3460	NM_016716	26554	Mm.12665	NM_016716	ENSMUSG00000004364	Cul3	AI467304|AW146203|mKIAA0617	cullin 3	protein-coding
common_peak2-30290-6-8--0.60452689106201-1.03789460276074	chr7	19226965	19227446	+	0	NA	Intergenic	Intergenic	14869	NM_027403	72242	Mm.326858	NM_027403	ENSMUSG00000070796	Psg21	1600019C01Rik|1600025N01Rik|1600026N13Rik|cea8	pregnancy-specific glycoprotein 21	protein-coding
unique_peak1-4594-7-4-0.477162735410827-1.09384600808989	chr3	60240271	60240774	+	0	NA	Intergenic	L1Md_A|LINE|L1	-36230	NM_001253713	56758	Mm.255723	NM_020007	ENSMUSG00000027763	Mbnl1	Mbnl|mKIAA0428	muscleblind-like 1 (Drosophila)	protein-coding
common_peak1-12580-21-24--0.0743669245084888-0.301029995663979	chr18	12941114	12942004	+	0	NA	intron (NM_001252490, intron 4 of 13)	intron (NM_001252490, intron 4 of 13)	36857	NR_045524	64291	Mm.259470	NM_020573	ENSMUSG00000044252	Osbpl1a	G430090F17Rik|Gm753|ORP-1|Osbpl1b	oxysterol binding protein-like 1A	protein-coding
common_peak1-13357-21-14-0.662598669657717-0.879255460030357	chr19	45079659	45080588	+	0	NA	promoter-TSS (NM_153796)	promoter-TSS (NM_153796)	809	NM_053164	94067	Mm.44174	NM_053164	ENSMUSG00000025208	Mrpl43	4930442D21Rik|bMRP36a	mitochondrial ribosomal protein L43	protein-coding
unique_peak2-37404-7-15--1.20090916970181-0.947446088118041	chr4	141722714	141723484	+	0	NA	intron (NM_001109685, intron 2 of 7)	intron (NM_001109685, intron 2 of 7)	43024	NM_144531	71529	Mm.255986	NM_144531	ENSMUSG00000040606	Kazn	2310007B04Rik|9030409G11Rik|AI256607|AI666764|AW061099|Kaz|Kazrin	kazrin, periplakin interacting protein	protein-coding
common_peak2-30949-24-15-0.793209902767717-1.16796998271032	chr8	39009910	39010635	+	0	NA	intron (NM_145841, intron 2 of 7)	(CAAAA)n|Simple_repeat|Simple_repeat	304984	NR_029884	723860		NR_029884		Mir383	Mirn383|mmu-mir-383	microRNA 383	ncRNA
unique_peak2-36732-6-13--1.2419568116773-1.58711810488664	chr3	57276632	57277197	+	0	NA	intron (NM_133784, intron 4 of 6)	intron (NM_133784, intron 4 of 6)	47582	NM_145539	229302	Mm.26618	NM_145539	ENSMUSG00000027801	Tm4sf4	Iltmp	transmembrane 4 superfamily member 4	protein-coding
unique_peak1-1241-10-3-1.35641534500877-1.75805390616669	chr11	113785539	113786084	+	0	NA	intron (NM_172800, intron 2 of 44)	Cheshire|DNA|MER1_type	141454	NM_172800	237979	Mm.130504	NM_172800	ENSMUSG00000041592	Sdk2	4632412F08Rik|5330435L01Rik|Sdk-2|mKIAA1514	sidekick homolog 2 (chicken)	protein-coding
common_peak1-18052-45-55-0.053003103287268-0.318326940901209	chr7	144964017	144965618	+	0	NA	Intergenic	Intergenic	335460	NR_033611	620016	Mm.388932	NR_033611	ENSMUSG00000049494	Gm12669	OTTMUSG00000007920	glutaredoxin 3 pseudogene	pseudo
common_peak2-21340-14-42--1.52704859434445-3.19271205772593	chr11	76497420	76498415	+	0	NA	intron (NM_177709, intron 1 of 2)	intron (NM_177709, intron 1 of 2)	4542	NM_177709	237858	Mm.127006	NM_177709	ENSMUSG00000046275	Tusc5	C130069F04Rik|DSPB1|Lost1	tumor suppressor candidate 5	protein-coding
common_peak1-16555-21-27--0.237865656791368-0.339372226903478	chr5	145114252	145115109	+	0	NA	intron (NM_025833, intron 1 of 13)	intron (NM_025833, intron 1 of 13)	-4112	NR_102374	100579137		NR_102372		Dmr	-	Dmrt1 related	ncRNA
unique_peak2-33362-12-11-0.0638134843664826-0.337263207250336	chr11	32346212	32346945	+	0	NA	Intergenic	ID_B1|SINE|B4	-8794	NM_173784	327900	Mm.260956	NM_173784		Ubtd2	4930571L24|9630054F20Rik|AI645720	ubiquitin domain containing 2	protein-coding
common_peak1-8185-21-19-0.247561170378873-0.427564438475253	chr10	80150042	80151008	+	0	NA	intron (NM_172457, intron 3 of 3)	B2_Mm2|SINE|B2	14040	NM_172457	208228	Mm.49309	NM_172457	ENSMUSG00000003348	Mob3a	5330417K06Rik|A630029F06|AV218468|Mobkl2a	MOB kinase activator 3A	protein-coding
common_peak2-32087-13-25--0.921967687503323-0.983972868822056	chr9	96781454	96782259	+	0	NA	intron (NM_001289645, intron 1 of 6)	intron (NM_001289645, intron 1 of 6)	8037	NM_001289646	235534	Mm.233031	NM_153420	ENSMUSG00000043587	Pxylp1	9430094M07Rik|Acpl2|BB177120|C130099A20Rik	2-phosphoxylose phosphatase 1	protein-coding
common_peak1-8975-36-27-0.671966164110151-1.28863469260242	chr11	58329570	58331205	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-14331	NM_001011861	100502887	Mm.378539	NM_001011861	ENSMUSG00000058807	Olfr331	MOR275-4	olfactory receptor 331	protein-coding
unique_peak1-354-8-1-2.00522241794757-2.05605744720049	chr1	136231648	136232083	+	0	NA	Intergenic	Intergenic	-2360	NM_001144855	68507	Mm.295105	NM_001144855	ENSMUSG00000026458	Ppfia4	1110008G13Rik|AI448359|AI852265|C81506	protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4	protein-coding
common_peak1-12142-58-30-1.34175362450362-5.25998910104472	chr17	27799099	27800994	+	0	NA	intron (NM_001286744, intron 1 of 9)	(TG)n|Simple_repeat|Simple_repeat	7510	NM_001286743	23969	Mm.4926	NM_011861	ENSMUSG00000040276	Pacsin1	A830061D09Rik|H74|mKIAA1379|syndapin	protein kinase C and casein kinase substrate in neurons 1	protein-coding
unique_peak1-5031-10-5-0.771452844287613-1.33892459842472	chr4	132387817	132388409	+	0	NA	intron (NM_001290725, intron 4 of 6)	intron (NM_001290725, intron 4 of 6)	10971	NM_001290725	100336	Mm.105230	NM_146154	ENSMUSG00000028882	Ppp1r8	6330548N22Rik|AU044684|NIPP1	protein phosphatase 1, regulatory (inhibitor) subunit 8	protein-coding
common_peak2-23232-9-15--0.81038659359578-0.630231561310125	chr15	7878739	7879288	+	0	NA	intron (NM_001081402, intron 10 of 17)	L1Md_T|LINE|L1	113463	NM_001301357	14573	Mm.4679	NM_010275	ENSMUSG00000022144	Gdnf	AI385739	glial cell line derived neurotrophic factor	protein-coding
common_peak1-18295-11-8-0.338768582809301-1.14218153353838	chr8	45581067	45581601	+	0	NA	Intergenic	MIRc|SINE|MIR	-454228	NM_001081286	14107	Mm.27365	NM_001081286	ENSMUSG00000070047	Fat1	2310038E12Rik|AU023433|Fath|mFat1	FAT tumor suppressor homolog 1 (Drosophila)	protein-coding
common_peak1-12928-38-56--0.261437354866211-0.434791164020309	chr19	5488532	5489912	+	0	NA	promoter-TSS (NM_027877)	promoter-TSS (NM_027877)	-886	NM_027877	71711	Mm.27697	NM_027877	ENSMUSG00000024906	Mus81	1200008A18Rik|AI182501|AW045863	MUS81 endonuclease homolog (yeast)	protein-coding
unique_peak1-5822-24-5-2.20824740204656-4.1393347358673	chr6	72188680	72189684	+	0	NA	Intergenic	Intergenic	-3611	NM_153778	71093	Mm.87449	NM_153778	ENSMUSG00000037621	Atoh8	4933425C05Rik|Hath6|Math6|bHLHa21|okadin	atonal homolog 8 (Drosophila)	protein-coding
common_peak2-19734-41-27-0.893793782791056-2.04885494247584	chr1	74081406	74082773	+	0	NA	intron (NM_001289895, intron 3 of 32)	intron (NM_001289895, intron 3 of 32)	88932	NM_027884	21961	Mm.309975	NM_027884	ENSMUSG00000055322	Tns1	1110018I21Rik|1200014E20Rik|AI648117|E030018G17Rik|E030037J05Rik|Tns	tensin 1	protein-coding
common_peak2-30693-58-91--0.227612021166516-0.485119537398548	chr7	110613478	110615375	+	0	NA	Intergenic	(GGGGA)n|Simple_repeat|Simple_repeat	-4129	NM_146756	258751	Mm.377673	NM_146756	ENSMUSG00000073948	Olfr608	MOR26-3	olfactory receptor 608	protein-coding
unique_peak2-38465-11-24--1.13516260552311-1.3750876294627	chr7	28930813	28931776	+	0	NA	intron (NM_001164655, intron 7 of 19)	MLT1B|LTR|MaLR	16809	NM_001164655	319482	Mm.483194	NM_176924	ENSMUSG00000078776	9530053A07Rik	FCGBP	RIKEN cDNA 9530053A07 gene	protein-coding
unique_peak2-35050-4-12--1.72390023199434-1.85743853830261	chr16	8636914	8637538	+	0	NA	promoter-TSS (NM_016881)	promoter-TSS (NM_016881)	568	NM_025708	66690	Mm.10068	NM_025708	ENSMUSG00000043140	Tmem186	2810440M13Rik|4432406C05Rik|AI648175|AW210586	transmembrane protein 186	protein-coding
unique_peak1-7426-8-0-3.00522241794757-2.70926996097583	chrX	163723599	163724095	+	0	NA	Intergenic	Intergenic	-22127	NM_133212	170744	Mm.196676	NM_133212	ENSMUSG00000040522	Tlr8	-	toll-like receptor 8	protein-coding
unique_peak1-2317-22-1-3.6472841050874-6.28700305248716	chr15	82165943	82167024	+	0	NA	intron (NM_008669, intron 4 of 9)	intron (NM_008669, intron 4 of 9)	2773	NM_008669	17939	Mm.20325	NM_008669	ENSMUSG00000022453	Naga	-	N-acetyl galactosaminidase, alpha	protein-coding
unique_peak1-5551-34-10-1.92263690836397-4.89888609789328	chr5	144313957	144315473	+	0	NA	intron (NM_026050, intron 2 of 2)	L1_Mus1|LINE|L1	5141	NM_026050	67238	Mm.383219	NM_026050	ENSMUSG00000048910	Fam220a	1500026F15Rik|2810453I06Rik|AW047776|Acpin1|Sipar	family with sequence similarity 220, member A	protein-coding
unique_peak2-38246-1-5--2.2120195109379-1.32905871926422	chr6	124476133	124476551	+	0	NA	Intergenic	ID_B1|SINE|B4	13703	NM_023143	50909	Mm.333375	NM_023143	ENSMUSG00000055172	C1ra	AI132558|C1r|mC1rA	complement component 1, r subcomponent A	protein-coding
common_peak2-22067-13-7-0.778472030637769-0.817533494790411	chr12	73779539	73779949	+	0	NA	Intergenic	(TCTCCC)n|Simple_repeat|Simple_repeat	-13929	NM_025522	66375	Mm.289653	NM_025522	ENSMUSG00000021094	Dhrs7	2310016E22Rik|5730564L20Rik|AW061210|Retdsr4|Retsdr4	dehydrogenase/reductase (SDR family) member 7	protein-coding
common_peak2-29361-9-10--0.269818212233077-1.05503135781948	chr5	151142649	151143047	+	0	NA	intron (NM_172887, intron 3 of 60)	intron (NM_172887, intron 3 of 60)	80343	NM_172887	320365	Mm.216590	NM_172887	ENSMUSG00000056602	Fry	13CDNA73|9330186A19Rik|AF346502|AI462658|C87180|D930046M03|cg003|mKIAA4143	furry homolog (Drosophila)	protein-coding
unique_peak1-2010-8-2-1.42025991722641-1.65811743852845	chr15	5523588	5524015	+	0	NA	intron (NR_045274, intron 2 of 4)	intron (NR_045274, intron 2 of 4)	77483	NR_045274	71432	Mm.291087	NR_045274		5430437J10Rik	-	RIKEN cDNA 5430437J10 gene	ncRNA
unique_peak2-36941-6-16--1.52206473087004-1.32521814697968	chr3	104299194	104299883	+	0	NA	intron (NM_001025067, intron 2 of 17)	intron (NM_001025067, intron 2 of 17)	16241	NM_001025067	269473	Mm.34855	NM_001025067	ENSMUSG00000032913	Lrig2	4632419I10Rik|BB096938	leucine-rich repeats and immunoglobulin-like domains 2	protein-coding
unique_peak2-38405-8-12--0.695217300193522-0.475924844171029	chr7	19841261	19841846	+	0	NA	TTS (NM_009499)	TTS (NM_009499)	15650	NM_001282021	22323	Mm.9684	NM_009499	ENSMUSG00000030403	Vasp	-	vasodilator-stimulated phosphoprotein	protein-coding
common_peak1-17683-12-14--0.25811461052088-0.309074325783021	chr7	66581246	66581757	+	0	NA	Intergenic	L1MC|LINE|L1	-1982	NR_015479	330544	Mm.9002	NR_015479		C230091D08Rik	-	RIKEN cDNA C230091D08 gene	ncRNA
common_peak1-15145-15-13-0.204809828498052-0.368541233333383	chr3	145101976	145102798	+	0	NA	intron (NM_027770, intron 28 of 59)	intron (NM_027770, intron 28 of 59)	-136785	NM_001081094	229937	Mm.24586	NM_001081094	ENSMUSG00000074182	Znhit6	2410019A14Rik	zinc finger, HIT type 6	protein-coding
unique_peak2-32555-8-15--0.994777582052429-0.771068449301683	chr1	74506191	74506857	+	0	NA	exon (NM_176972, exon 18 of 26)	exon (NM_176972, exon 18 of 26)	-46110	NM_021383	58184	Mm.291708	NM_021383	ENSMUSG00000026174	Rqcd1	2610007F23Rik|AI593551|Fl10	rcd1 (required for cell differentiation) homolog 1 (S. pombe)	protein-coding
common_peak2-24168-25-30--0.0923464050417691-0.304710633611958	chr16	45742505	45743175	+	0	NA	intron (NM_172511, intron 1 of 4)	CpG	228	NM_001272070	213012	Mm.247453	NM_172511	ENSMUSG00000033157	Abhd10	-	abhydrolase domain containing 10	protein-coding
unique_peak2-34172-2-6--1.72480917832092-1.26211192963361	chr13	32956234	32956656	+	0	NA	Intergenic	Intergenic	-13391	NM_025429	66222	Mm.20144	NM_025429	ENSMUSG00000044734	Serpinb1a	1190005M04Rik|AI325983|EI|EIA|ELANH2|LEI|M/NEI|MNEI|PI2	serine (or cysteine) peptidase inhibitor, clade B, member 1a	protein-coding
common_peak1-19126-66-76-0.25169712373094-0.632423066399087	chr9	78175312	78177346	+	0	NA	exon (NM_205822, exon 2 of 3)	exon (NM_205822, exon 2 of 3)	492	NM_205822	382088	Mm.360477	NM_205822	ENSMUSG00000038750	Omt2b	AU018149|C86230|Mosg|OM2b	oocyte maturation, beta	protein-coding
common_peak1-17865-16-31--0.881736357731938-1.20073456579999	chr7	113513736	113514329	+	0	NA	Intergenic	RLTR6-int|LTR|ERV1	-45990	NR_030720	668128	Mm.484022	NR_030720		Gm8989	EG668128|Gm21911	very large inducible GTPase 1 pseudogene	pseudo
common_peak2-26375-29-29-0.205399485006592-0.423354874519384	chr2	44927184	44927908	+	0	NA	intron (NM_001289521, intron 1 of 8)	intron (NM_001289521, intron 1 of 8)	38251	NM_001289521	24136	Mm.440702	NM_015753	ENSMUSG00000026872	Zeb2	9130203F04Rik|D130016B08Rik|SIP1|Zfhx1b|Zfx1b|Zfxh1b	zinc finger E-box binding homeobox 2	protein-coding
common_peak2-22303-11-26--1.24619391791185-1.66030262873422	chr13	19395262	19395793	+	0	NA	Intergenic	Intergenic	92094	NM_024270	76205	Mm.41940	NM_024270	ENSMUSG00000003062	Stard3nl	0610035N01Rik|6530409L22Rik|AW124774|MENTHO	STARD3 N-terminal like	protein-coding
unique_peak1-5880-9-0-3.18961340640422-3.01029995663981	chr6	86515665	86516168	+	0	NA	Intergenic	Intergenic	38521	NR_037961	72012	Mm.349174	NR_037960	ENSMUSG00000097048	1600020E01Rik	-	RIKEN cDNA 1600020E01 gene	ncRNA
common_peak1-8900-12-11-0.0638134843664826-0.337263207250336	chr11	49846011	49846563	+	0	NA	intron (NM_001290750, intron 1 of 7)	intron (NM_001290750, intron 1 of 7)	7454	NM_001290750	59044	Mm.359004	NM_021540	ENSMUSG00000020376	Rnf130	G1RZFP|G1rp|GOLIATH|GP	ring finger protein 130	protein-coding
common_peak2-20746-21-42--0.856775489435862-1.3806499615138	chr10	111515595	111517274	+	0	NA	TTS (NM_027018)	TTS (NM_027018)	-3976	NM_026223	67537	Mm.292351	NM_026223	ENSMUSG00000020214	Glipr1l2	4921508O11Rik	GLI pathogenesis-related 1 like 2	protein-coding
unique_peak2-37777-6-6--0.241956811677302-0.947717972411649	chr5	117119466	117119865	+	0	NA	Intergenic	Intergenic	-77839	NM_026886	68955	Mm.146779	NM_026886	ENSMUSG00000063919	Srrm4	1500001A10Rik|B230202K19Rik|bv|mKIAA1853|nSR100	serine/arginine repetitive matrix 4	protein-coding
common_peak2-20156-21-38--0.715912953596013-0.993451450456403	chr1	169733271	169734542	+	0	NA	intron (NM_033652, intron 3 of 7)	intron (NM_033652, intron 3 of 7)	114217	NM_033652	110648	Mm.330081	NM_033652	ENSMUSG00000026686	Lmx1a	Lmx1.1|dr|dreher|sst	LIM homeobox transcription factor 1 alpha	protein-coding
common_peak2-22934-40-57--0.199005312376474-0.373449689110125	chr14	47298014	47299182	+	0	NA	Intergenic	Intergenic	-41500	NR_046460	74458	Mm.390708	NR_046460		4933425B07Rik	-	RIKEN cDNA 4933425B07 gene	ncRNA
unique_peak1-45-11-3-1.50869358425161-1.95434855131066	chr1	21037432	21038045	+	0	NA	intron (NM_177409, intron 1 of 10)	intron (NM_177409, intron 1 of 10)	31568	NM_177409	170829	Mm.185680	NM_177409		Tram2	C330003D03Rik	translocating chain-associating membrane protein 2	protein-coding
common_peak2-19630-31-26-0.470351168649655-0.720235944639222	chr1	38986922	38987570	+	0	NA	Intergenic	Intergenic	-8748	NM_001011684	433292	Mm.333709	NM_001011684	ENSMUSG00000067604	Nms	AB164466	neuromedin S	protein-coding
common_peak1-11317-37-16-1.43853023023548-3.58938495778628	chr15	85347432	85348928	+	0	NA	Intergenic	BLACKJACK|DNA|AcHobo	-14523	NM_001256072	328577	Mm.212960	NM_001256072	ENSMUSG00000096607	7530416G11Rik	-	RIKEN cDNA 7530416G11 gene	protein-coding
common_peak1-7524-73-96-0.0924821642380937-0.354509443695952	chr1	30872852	30874257	+	0	NA	intron (NM_001081080, intron 7 of 14)	intron (NM_001081080, intron 7 of 14)	46547	NM_001081080	213109	Mm.194486	NM_025871	ENSMUSG00000048874	Phf3	2310061N19Rik|mKIAA0244	PHD finger protein 3	protein-coding
common_peak2-22535-109-136-0.288127598926675-0.990944465647887	chr13	55714305	55715468	+	0	NA	Intergenic	Intergenic	-9480	NM_007596	12328	Mm.2313	NM_007596	ENSMUSG00000021501	Caml	AI385748|Camlg	calcium modulating ligand	protein-coding
unique_peak1-4764-9-5-0.604650905683064-1.21398586181642	chr3	122247755	122248293	+	0	NA	intron (NM_001114665, intron 14 of 15)	intron (NM_001114665, intron 14 of 15)	-3425	NR_106117	102465764		NR_106117		Mir7657	mmu-mir-7657	microRNA mir-7657	ncRNA
common_peak2-20705-11-9-0.186765489364251-0.344532117358383	chr10	93588947	93589585	+	0	NA	intron (NM_053072, intron 13 of 20)	ORR1B2|LTR|MaLR	-21410	NM_011629	22025	Mm.107483	NM_011629	ENSMUSG00000005897	Nr2c1	4831444H07Rik|80.3|Eenr|TR2|Tr2-11	nuclear receptor subfamily 2, group C, member 1	protein-coding
common_peak1-10528-84-97-0.320224214773817-0.922095462234909	chr14	12283824	12285194	+	0	NA	Intergenic	RLTR26|LTR|ERVK	-101558	NM_008981	19270	Mm.431266	NM_008981	ENSMUSG00000021745	Ptprg	5430405N12Rik|AW046354|AW549872|RPTPgamma	protein tyrosine phosphatase, receptor type, G	protein-coding
unique_peak1-3055-32-2-3.6941295184985-9.17270135773948	chr18	7692829	7693731	+	0	NA	Intergenic	CpG	-66419	NM_001161620	75739	Mm.133293	NM_001081287	ENSMUSG00000057440	Mpp7	1110068J02Rik|2810038M04Rik|5430426E14Rik|AI415104|Gm955	membrane protein, palmitoylated 7 (MAGUK p55 subfamily member 7)	protein-coding
common_peak1-10753-24-22-0.269647946710704-0.457753417732779	chr14	69816099	69816772	+	0	NA	Intergenic	Intergenic	7686	NM_010921	18095	Mm.3520	NM_010921	ENSMUSG00000022061	Nkx3-1	Bax|NKX3.1|NKX3A|Nkx-3.1|bagpipe	NK-3 transcription factor, locus 1 (Drosophila)	protein-coding
common_peak2-25166-27-55--0.815808971162368-1.63721186903097	chr18	53416891	53418318	+	0	NA	intron (NM_029394, intron 1 of 6)	intron (NM_029394, intron 1 of 6)	12288	NM_029394	69226	Mm.32414	NM_029394	ENSMUSG00000024535	Snx24	2810011K15Rik|5730433I16Rik|AI451341	sorting nexing 24	protein-coding
common_peak2-21035-8-9--0.316705676939792-1.03275496310833	chr11	33660564	33660993	+	0	NA	intron (NM_001190885, intron 1 of 8)	intron (NM_001190885, intron 1 of 8)	82807	NM_027398	70357	Mm.252514	NM_027398	ENSMUSG00000053519	Kcnip1	KCHIP1|Kchip1.2	Kv channel-interacting protein 1	protein-coding
unique_peak1-1667-13-6-0.971117108580164-1.01572999746118	chr13	67080821	67081366	+	0	NA	intron (NM_008959, intron 9 of 12)	intron (NM_008959, intron 9 of 12)	-47085	NM_025547	66410	Mm.347939	NM_025547	ENSMUSG00000021519	Mterf3	2410017I18Rik|Mterfd1	mitochondrial transcription termination factor 3	protein-coding
common_peak1-17756-12-18--0.599151528355947-0.476916024233333	chr7	88277859	88278418	+	0	NA	intron (NM_001004184, intron 8 of 17)	intron (NM_001004184, intron 8 of 17)	18453	NM_001004184	434203	Mm.389909	NM_001004184	ENSMUSG00000025726	Slc28a1	Cnt1	solute carrier family 28 (sodium-coupled nucleoside transporter), member 1	protein-coding
common_peak1-7830-45-75--0.387569488098713-0.774169551378916	chr1	127773887	127775182	+	0	NA	intron (NM_145100, intron 2 of 2)	Lx9|LINE|L1	34257	NM_145100	72585	Mm.490405	NM_145100		Lypd1	2700050C12Rik|AI853408|C530008O16Rik|Lynx2|Lypdc1	Ly6/Plaur domain containing 1	protein-coding
common_peak2-23111-13-23--0.806490470083387-0.781208772652439	chr14	79451803	79452680	+	0	NA	intron (NM_027906, intron 21 of 44)	intron (NM_027906, intron 21 of 44)	194933	NM_001033215	105590	Mm.486536	NM_001033215	ENSMUSG00000071262	Zfp957	AU017455	zinc finger protein 957	protein-coding
common_peak2-28301-14-18--0.348711353085941-0.360333814299795	chr4	132535588	132536189	+	0	NA	intron (NM_010208, intron 1 of 12)	B3|SINE|B2	5878	NM_010208	14191	Mm.271665	NM_010208	ENSMUSG00000028874	Fgr	-	Gardner-Rasheed feline sarcoma viral (Fgr) oncogene homolog	protein-coding
unique_peak1-3243-22-2-3.06232160436625-5.33257845442771	chr18	64335412	64336500	+	0	NA	intron (NR_045366, intron 2 of 5)	intron (NR_045366, intron 2 of 5)	-78057	NM_009182	20451	Mm.252110	NM_009182	ENSMUSG00000056812	St8sia3	AI847333|ST8SiaIII|Siat8c	ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3	protein-coding
unique_peak2-33624-9-18--1.05831410703937-0.965105923112245	chr11	97188267	97188929	+	0	NA	intron (NM_025927, intron 6 of 7)	RLTR40|LTR|ERVK	11568	NM_025927	67036	Mm.5381	NM_025927	ENSMUSG00000018882	Mrpl45	2600005P05Rik|AU043542|R75241	mitochondrial ribosomal protein L45	protein-coding
unique_peak1-6347-16-3-2.11826364226806-2.65002542325363	chr7	58800272	58801037	+	0	NA	intron (NM_001271879, intron 5 of 20)	B4|SINE|B4	34255	NM_001271879	233246	Mm.254431	NM_177694	ENSMUSG00000055489	Ano5	9330162L24|Gdd1|Tmem16e	anoctamin 5	protein-coding
common_peak2-32384-9-6-0.382258484346616-1.11707584880836	chrX	126688759	126688984	+	0	NA	intron (NM_172493, intron 22 of 26)	L1VL4|LINE|L1	404593	NM_172493	54004	Mm.10763	NM_017398	ENSMUSG00000034480	Diap2	Dia3|Diaph2|Drf2|E430022I22Rik	diaphanous homolog 2 (Drosophila)	protein-coding
common_peak1-14960-25-42--0.564414849356992-0.820829064533854	chr3	104817323	104818298	+	0	NA	intron (NM_001163332, intron 3 of 5)	RSINE1|SINE|B4	38061	NM_001163333	80281	Mm.200327	NM_030249	ENSMUSG00000062127	Cttnbp2nl	AA552995|AA589392|AU018624|BC003236|mKIAA1433	CTTNBP2 N-terminal like	protein-coding
common_peak1-18063-31-16-1.13777582956278-2.15838218998676	chr8	46005161	46006501	+	0	NA	Intergenic	Intergenic	-29731	NM_001081286	14107	Mm.27365	NM_001081286	ENSMUSG00000070047	Fat1	2310038E12Rik|AU023433|Fath|mFat1	FAT tumor suppressor homolog 1 (Drosophila)	protein-coding
unique_peak1-4637-25-8-1.69192490390279-3.04993787975775	chr3	87511929	87513148	+	0	NA	intron (NM_001003912, intron 13 of 39)	Lx|LINE|L1	40007	NM_028971	74485	Mm.474494	NM_028971	ENSMUSG00000023084	Lrrc71	4933430H15Rik	leucine rich repeat containing 71	protein-coding
unique_peak1-4684-9-4-0.867685311516858-1.36011389749466	chr3	95689593	95690121	+	0	NA	intron (NM_153513, intron 4 of 4)	intron (NM_153513, intron 4 of 4)	-3706	NM_001033302	229599	Mm.331218	NM_001033302	ENSMUSG00000038550	Ciart	Chrono|Gm129	circadian associated repressor of transcription	protein-coding
common_peak1-7876-11-11--0.0762689164695427-0.301029995663976	chr1	134070502	134071018	+	0	NA	Intergenic	Intergenic	-17253	NM_001033250	213409	Mm.426321	NM_001033250	ENSMUSG00000079330	Lemd1	4930540I23Rik|6430514M23Rik|AI428128|LEMP-1	LEM domain containing 1	protein-coding
common_peak1-18224-42-40-0.3847773232491-0.755494033265326	chr8	25719824	25720878	+	0	NA	intron (NM_010084, intron 19 of 19)	intron (NM_010084, intron 19 of 19)	-12927	NM_008324	15930	Mm.392	NM_008324	ENSMUSG00000031551	Ido1	Ido|Indo	indoleamine 2,3-dioxygenase 1	protein-coding
common_peak2-31737-16-43--1.34116797636924-2.83052996583712	chr9	14783929	14785231	+	0	NA	Intergenic	RodERV21-int|LTR|ERV1	65342	NM_019482	55991	Mm.142253	NM_019482		Panx1	AI847747	pannexin 1	protein-coding
unique_peak1-1888-9-4-0.867685311516858-1.36011389749466	chr14	64118027	64118482	+	0	NA	intron (NM_021480, intron 2 of 8)	intron (NM_021480, intron 2 of 8)	9675	NM_021480	58865	Mm.354229	NM_021480	ENSMUSG00000021953	Tdh	-	L-threonine dehydrogenase	protein-coding
common_peak2-21385-45-60--0.070379312218015-0.308391271559909	chr11	79703762	79704665	+	0	NA	Intergenic	RMER10A|LTR|ERVL	71676	NM_144826	216987	Mm.274961	NM_144826	ENSMUSG00000035575	Utp6	4732497O03Rik|HCA66	UTP6, small subunit (SSU) processome component, homolog (yeast)	protein-coding
unique_peak1-3015-11-2-1.92373108353046-2.32232533660526	chr17	86768812	86769354	+	0	NA	intron (NM_011104, intron 2 of 14)	Lx8|LINE|L1	-82565	NR_045435	72104	Mm.443401	NR_045435		2010106C02Rik	-	RIKEN cDNA 2010106C02 gene	ncRNA
common_peak2-22311-27-36--0.217907414733714-0.352152970649951	chr13	21402135	21402952	+	0	NA	Intergenic	L1Md_T|LINE|L1	-1529	NM_145451	75512	Mm.46195	NM_145451	ENSMUSG00000004341	Gpx6	1700020G18Rik|Ry2d1|olfactory	glutathione peroxidase 6	protein-coding
common_peak2-22691-12-5-1.06381348436648-1.78669045979184	chr13	98545806	98546165	+	0	NA	Intergenic	Intergenic	216030	NR_046157	328314	Mm.138047	NR_046157		Gm5086	B230311A21|EG328314	predicted gene 5086	ncRNA
common_peak2-23637-28-38--0.232443099040786-0.377553616161376	chr15	83472909	83474174	+	0	NA	intron (NM_001271473, intron 4 of 19)	intron (NM_001271473, intron 4 of 19)	-47954	NM_183017	223723	Mm.46778	NM_183017	ENSMUSG00000016757	Ttll12	BC055368|D430005B17	tubulin tyrosine ligase-like family, member 12	protein-coding
unique_peak2-35100-1-9--2.94898510510411-2.31132995230379	chr16	20803808	20804312	+	0	NA	Intergenic	Intergenic	-69476	NM_009379	21832	Mm.3943	NM_009379	ENSMUSG00000022847	Thpo	Mgdf|Ml|Mpllg|Tpo	thrombopoietin	protein-coding
common_peak1-14603-15-10-0.552733131918359-0.604422558181019	chr3	51661298	51661978	+	0	NA	intron (NM_001004176, intron 1 of 4)	intron (NM_001004176, intron 1 of 4)	196523	NM_174995	211666	Mm.24679	NM_174995	ENSMUSG00000074604	Mgst2	GST2|MGST-II	microsomal glutathione S-transferase 2	protein-coding
unique_peak1-741-9-1-2.18961340640422-2.31132995230379	chr10	111365526	111366053	+	0	NA	Intergenic	Intergenic	-43962	NM_178610	52705	Mm.34606	NM_178610	ENSMUSG00000063334	Krr1	2610511F02Rik|AI255219|AI428520|D10Ertd773e|Hrb2	KRR1, small subunit (SSU) processome component, homolog (yeast)	protein-coding
common_peak2-22474-32-14-1.37220142361114-2.96631085054195	chr13	48552322	48552969	+	0	NA	Intergenic	Intergenic	56134	NM_001164575	67911	Mm.251375	NM_026450	ENSMUSG00000050954	Zfp169	1700025J14Rik|4930429A13Rik|BE688704	zinc finger protein 169	protein-coding
unique_peak2-36488-7-11--0.785871670422967-1.21681515183528	chr2	153014780	153015377	+	0	NA	intron (NM_133847, intron 6 of 17)	MIRc|SINE|MIR	28041	NM_133847	99237	Mm.330674	NM_133847	ENSMUSG00000068040	Tm9sf4	AA986553|AU045326|B930079E06|mKIAA0255	transmembrane 9 superfamily protein member 4	protein-coding
unique_peak2-34228-7-6--0.00826409175941478-0.97990265578305	chr13	51648507	51648884	+	0	NA	intron (NM_009167, intron 1 of 11)	B4A|SINE|B4	13758	NM_009167	20418	Mm.131870	NM_009167	ENSMUSG00000021448	Shc3	N-Shc|Rai|ShcC	src homology 2 domain-containing transforming protein C3	protein-coding
common_peak1-18831-17-18--0.0296311752385474-0.306899554715732	chr9	13826328	13827140	+	0	NA	Intergenic	ID_B1|SINE|B4	194563	NM_176836	72826	Mm.246174	NM_176836	ENSMUSG00000037808	Fam76b	2810485I05Rik|C78303	family with sequence similarity 76, member B	protein-coding
common_peak1-9520-14-21--0.560215458279653-0.519193887192484	chr11	115612308	115613069	+	0	NA	Intergenic	B3|SINE|B2	-14059	NM_028014	71947	Mm.23168	NM_028014	ENSMUSG00000020747	2310067B10Rik	Kiaa0195|mKIAA0195	RIKEN cDNA 2310067B10 gene	protein-coding
common_peak1-16644-17-6-1.41094141614743-1.84350559086818	chr6	86605073	86605909	+	0	NA	intron (NM_010751, intron 3 of 5)	(TCTA)n|Simple_repeat|Simple_repeat	13662	NM_010751	17119	Mm.279580	NM_010751	ENSMUSG00000001156	Mxd1	AW122478|Mad|Mad1	MAX dimerization protein 1	protein-coding
unique_peak2-35172-4-7--1.02346051385325-1.09384600808989	chr16	38246310	38246793	+	0	NA	TTS (NM_019827)	TTS (NM_019827)	48359	NM_010936	18171	Mm.8509	NM_010936	ENSMUSG00000022809	Nr1i2	PXR|PXR.1|PXR.2|PXR1|SXR|mPXR	nuclear receptor subfamily 1, group I, member 2	protein-coding
unique_peak2-32725-6-12--1.13504160776079-1.45089835786865	chr1	162041005	162041630	+	0	NA	intron (NM_177839, intron 14 of 21)	intron (NM_177839, intron 14 of 21)	-33201	NR_038031	75255	Mm.414845	NR_038030	ENSMUSG00000026729	4930562F07Rik	-	RIKEN cDNA 4930562F07 gene	ncRNA
common_peak1-8039-14-4-1.57728806547028-2.4322161449009	chr1	171269785	171270439	+	0	NA	Intergenic	L1Md_T|LINE|L1	191483	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
common_peak2-27123-9-12--0.510826311736872-0.394412252720706	chr3	19162726	19163236	+	0	NA	intron (NM_001122759, intron 1 of 12)	intron (NM_001122759, intron 1 of 12)	2027	NM_008802	18583	Mm.355614	NM_008802	ENSMUSG00000069094	Pde7a	AU015378|AW047537	phosphodiesterase 7A	protein-coding
common_peak1-11020-22-25--0.0531556130536872-0.301029995663976	chr15	38457387	38458373	+	0	NA	Intergenic	ORR1D2-int|LTR|MaLR	-8859	NM_018745	54375	Mm.250214	NM_018745	ENSMUSG00000037458	Azin1	1700085L02Rik|AI414949|Oazi|Oazin	antizyme inhibitor 1	protein-coding
unique_peak1-3866-9-1-2.18961340640422-2.31132995230379	chr2	9956504	9957022	+	0	NA	intron (NM_027748, intron 2 of 6)	intron (NM_027748, intron 2 of 6)	13473	NM_027748	209361	Mm.86343	NM_027748	ENSMUSG00000025782	Taf3	140kDa|4933439M23Rik|AW539625|TAF140|TAFII-140|TAFII140|mTAFII140	TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated factor	protein-coding
common_peak1-17864-18-29--0.593971444380167-0.662033714151235	chr7	113512661	113513636	+	0	NA	Intergenic	RLTR6-int|LTR|ERV1	-45106	NR_030720	668128	Mm.484022	NR_030720		Gm8989	EG668128|Gm21911	very large inducible GTPase 1 pseudogene	pseudo
common_peak2-25248-3-14--2.3208736855678-2.58603100924543	chr18	65053467	65054128	+	0	NA	intron (NM_001114386, intron 1 of 30)	intron (NM_001114386, intron 1 of 30)	6387	NM_001114386	83814	Mm.98668	NM_031881	ENSMUSG00000024589	Nedd4l	1300012C07Rik|Nedd4-2|Nedd4b	neural precursor cell expressed, developmentally down-regulated gene 4-like	protein-coding
common_peak2-23505-18-23--0.272043349492805-0.34651636097721	chr15	76351172	76351889	+	0	NA	intron (NM_130893, intron 1 of 1)	intron (NM_130893, intron 1 of 1)	1029	NM_130893	170729	Mm.218747	NM_130893	ENSMUSG00000048385	Scrt1	-	scratch homolog 1, zinc finger protein (Drosophila)	protein-coding
unique_peak1-6975-10-0-3.35641534500877-3.31132995230379	chr8	119548571	119549057	+	0	NA	intron (NM_029686, intron 30 of 42)	intron (NM_029686, intron 30 of 42)	-31465	NM_026572	68133	Mm.258462	NM_026572	ENSMUSG00000034424	Gcsh	1100001L02Rik|5730591C18Rik	glycine cleavage system protein H (aminomethyl carrier)	protein-coding
common_peak2-23559-11-9-0.186765489364251-0.344532117358383	chr15	79325661	79326105	+	0	NA	intron (NM_008427, intron 1 of 1)	intron (NM_008427, intron 1 of 1)	9788	NM_008427	16520	Mm.140760	NM_008427	ENSMUSG00000044216	Kcnj4	IRK3|Kcnf2|MB-IRK3	potassium inwardly-rectifying channel, subfamily J, member 4	protein-coding
common_peak1-16227-19-13-0.595332404604082-0.713635438203849	chr5	100518238	100519045	+	0	NA	intron (NM_182841, intron 5 of 7)	intron (NM_182841, intron 5 of 7)	11660	NR_045993	76003	Mm.447060	NR_045993	ENSMUSG00000086259	Tmem150cos	5830403M04Rik	transmembrane protein 150C, opposite strand	ncRNA
unique_peak1-7097-8-1-2.00522241794757-2.05605744720049	chr9	41478634	41479160	+	0	NA	Intergenic	MTD|LTR|MaLR	88888	NR_029822	387236		NR_029822	miRBase:MI0000725	Mir125b-1	Mirn125b|Mirn125b-1	microRNA 125b-1	ncRNA
common_peak2-31919-24-27--0.0141450192898871-0.304978344874324	chr9	61372425	61373355	+	0	NA	Intergenic	RSINE1|SINE|B4	152717	NM_001083927	21887	Mm.24255	NM_009389	ENSMUSG00000032280	Tle3	2610103N05Rik|ESG|Grg3a|Grg3b|mKIAA1547	transducin-like enhancer of split 3, homolog of Drosophila E(spl)	protein-coding
common_peak2-31333-23-52--1.00615295005412-2.21947156384788	chr8	83608131	83608806	+	0	NA	Intergenic	Intergenic	-69663	NM_027554	74841	Mm.246018	NM_027554	ENSMUSG00000038250	Usp38	4631402N15Rik|4833420O05Rik|AA536967|AU044701|AW544820|mKIAA1891	ubiquitin specific peptidase 38	protein-coding
unique_peak2-37869-5-8--0.874305337448166-1.10484139239135	chr5	137671694	137672158	+	0	NA	Intergenic	Intergenic	-57556	NM_009599	11423	Mm.255464	NM_009599	ENSMUSG00000023328	Ache	-	acetylcholinesterase	protein-coding
common_peak1-19349-10-6-0.549060422951165-1.21398586181642	chrX	8192351	8192858	+	0	NA	Intergenic	Intergenic	-26232	NM_198898	278174	Mm.379565	NM_198898	ENSMUSG00000079701	Ssxb3	-	synovial sarcoma, X member B, breakpoint 3	protein-coding
unique_peak2-32483-11-10-0.0492619656143161-0.31137425193576	chr1	36474801	36475393	+	0	NA	intron (NM_001277076, intron 45 of 52)	intron (NM_001277076, intron 45 of 52)	26987	NM_001013374	214895	Mm.287854	NM_001013374	ENSMUSG00000001143	Lman2l	A630028F14Rik|VIP36-like|VIPL	lectin, mannose-binding 2-like	protein-coding
unique_peak2-36142-4-11--1.6084230145744-1.68134727924692	chr2	18050332	18050886	+	0	NA	intron (NR_045538, intron 8 of 22)	intron (NR_045538, intron 8 of 22)	64397	NM_001252561	17354	Mm.209175	NM_010804	ENSMUSG00000026743	Mllt10	Af10|B130021D15Rik|D630001B22Rik|mKIAA4140	myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10	protein-coding
unique_peak2-34067-5-10--1.16381195464315-1.33892459842472	chr13	104037984	104038527	+	0	NA	intron (NM_175171, intron 1 of 28)	intron (NM_175171, intron 1 of 28)	86317	NM_175171	328329	Mm.202606	NM_175171	ENSMUSG00000034751	Mast4	4930420O11Rik|AI642422|mKIAA0303	microtubule associated serine/threonine kinase family member 4	protein-coding
unique_peak1-7245-10-1-2.35641534500877-2.57096726280955	chr9	78177853	78178274	+	0	NA	TTS (NM_205822)	TTS (NM_205822)	2226	NM_205822	382088	Mm.360477	NM_205822	ENSMUSG00000038750	Omt2b	AU018149|C86230|Mosg|OM2b	oocyte maturation, beta	protein-coding
unique_peak1-5213-11-5-0.923731083530457-1.477227296591	chr5	36080939	36081430	+	0	NA	Intergenic	MTD|LTR|MaLR	-9259	NM_194344	231147	Mm.290429	NM_194344	ENSMUSG00000036553	Sh3tc1	4631428G15|BC024909	SH3 domain and tetratricopeptide repeats 1	protein-coding
common_peak2-22973-31-35-0.0553136693708112-0.313095283157747	chr14	54686214	54687282	+	0	NA	Intergenic	Intergenic	186856	NM_001113358	13135	Mm.319038	NM_010015	ENSMUSG00000022174	Dad1	AI323713	defender against cell death 1	protein-coding
common_peak1-11816-7-16--1.28837201095215-1.08658567012551	chr16	65565409	65565913	+	0	NA	Intergenic	Intergenic	-2719	NM_026879	68942	Mm.432944	NM_026879	ENSMUSG00000004843	Chmp2b	1190006E07Rik	charged multivesicular body protein 2B	protein-coding
common_peak2-22656-12-17--0.521149016354673-0.417187467413082	chr13	95037631	95038383	+	0	NA	intron (NM_029153, intron 1 of 8)	intron (NM_029153, intron 1 of 8)	17229	NM_029153	107767	Mm.201455	NM_029153	ENSMUSG00000021687	Scamp1	4930505M11Rik|AI415563|AW122395	secretory carrier membrane protein 1	protein-coding
common_peak1-19422-10-16--0.73104749624157-0.604422558181019	chrX	74392568	74393182	+	0	NA	Intergenic	B3|SINE|B2	-363691	NM_020601	21372	Mm.258476	NM_020601	ENSMUSG00000025246	Tbl1x	5330429M20|Tbl1	transducin (beta)-like 1 X-linked	protein-coding
unique_peak2-33054-1-8--2.79698201165906-2.05605744720049	chr10	76203731	76204067	+	0	NA	Intergenic	L1_Mur3|LINE|L1	-15110	NM_009933	12833	Mm.2509	NM_009933	ENSMUSG00000001119	Col6a1	AI747156|Col6a-1	collagen, type VI, alpha 1	protein-coding
common_peak2-24591-9-8-0.0196884049619079-1.03275496310833	chr17	31920539	31921009	+	0	NA	Intergenic	ORR1A2|LTR|MaLR	71963	NM_010831	17691	Mm.290941	NM_010831	ENSMUSG00000024042	Sik1	Msk|Sik|Snf1lk	salt inducible kinase 1	protein-coding
unique_peak1-2680-12-4-1.32684789020028-2.04196296489515	chr16	58555333	58555911	+	0	NA	Intergenic	Intergenic	-32197	NM_018784	54613	Mm.212742	NM_018784	ENSMUSG00000022747	St3gal6	1700023B24Rik|AI930218|AW552396|Siat10|St3galVI	ST3 beta-galactoside alpha-2,3-sialyltransferase 6	protein-coding
common_peak2-22768-3-7--1.41398308995928-1.23214870625617	chr14	76414774	76415086	+	0	NA	Intergenic	Intergenic	-4258	NM_026816	68705	Mm.20415	NM_026816	ENSMUSG00000067995	Gtf2f2	1110031C13Rik|AI326315	general transcription factor IIF, polypeptide 2	protein-coding
common_peak1-13361-14-13-0.0918612383000403-0.332077462497413	chr19	45748983	45749636	+	0	NA	Intergenic	Intergenic	-14626	NM_013907	30838	Mm.254739	NM_013907	ENSMUSG00000040913	Fbxw4	Dac|Fbw4|SHFM3|SHSF3|dactylin|dactylyn	F-box and WD-40 domain protein 4	protein-coding
unique_peak1-850-9-0-3.18961340640422-3.01029995663981	chr11	19850438	19851080	+	0	NA	intron (NM_033523, intron 1 of 5)	intron (NM_033523, intron 1 of 5)	26314	NM_033523	114716	Mm.266627	NM_033523	ENSMUSG00000045671	Spred2	C79158	sprouty-related, EVH1 domain containing 2	protein-coding
common_peak2-23553-74-154--0.56023782829563-2.32622738674983	chr15	79107474	79109893	+	0	NA	intron (NM_177580, intron 4 of 13)	L1MC4|LINE|L1	7256	NM_177580	207495	Mm.309647	NM_177580	ENSMUSG00000018126	Baiap2l2	BC048937	BAI1-associated protein 2-like 2	protein-coding
unique_peak2-39204-7-12--0.901348887842903-1.31827279259406	chr8	105826516	105827196	+	0	NA	Intergenic	L1ME2|LINE|L1	44578	NR_036588	69794	Mm.396139	NR_036588		1600027J07Rik	-	RIKEN cDNA 1600027J07 gene	ncRNA
unique_peak2-38054-6-5--0.0195643903408542-0.947717972411649	chr6	43292420	43292796	+	0	NA	Intergenic	Intergenic	-33055	NM_130869	18291	Mm.17715	NM_130869	ENSMUSG00000029736	Nobox	OG2|Og2x	NOBOX oogenesis homeobox	protein-coding
common_peak1-10297-11-10-0.0492619656143161-0.31137425193576	chr13	63563907	63564437	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-31119	NM_001282942	14088	Mm.126106	NM_007985	ENSMUSG00000021461	Fancc	Facc	Fanconi anemia, complementation group C	protein-coding
common_peak2-25203-12-11-0.0638134843664826-0.337263207250336	chr18	60638162	60638766	+	0	NA	intron (NM_134133, intron 1 of 1)	intron (NM_134133, intron 1 of 1)	23173	NM_134133	106878	Mm.273197	NM_134133	ENSMUSG00000038059	Smim3	2010002N04Rik|AI195350|AW561905|Nid67|cI-41	small integral membrane protein 3	protein-coding
common_peak2-28501-84-181--0.572860581309671-2.81172363929362	chr5	3340560	3343490	+	0	NA	Intergenic	CpG	-2287	NM_009873	12571	Mm.31672	NM_009873	ENSMUSG00000040274	Cdk6	5830411I20|AI504062|Crk2	cyclin-dependent kinase 6	protein-coding
unique_peak1-4940-7-4-0.477162735410827-1.09384600808989	chr4	83417008	83417517	+	0	NA	intron (NM_001081012, intron 23 of 25)	L1M4c|LINE|L1	245813	NM_001081012	320226	Mm.180032	NM_029117	ENSMUSG00000052407	Ccdc171	4930418J05Rik|4930473A06Rik|A330015D16Rik	coiled-coil domain containing 171	protein-coding
common_peak1-11323-28-27-0.245604197763859-0.431536360747188	chr15	85634458	85635406	+	0	NA	3' UTR (NM_001113418, exon 8 of 8)	3' UTR (NM_001113418, exon 8 of 8)	7195	NM_001164626	72355	Mm.33706	NM_197998	ENSMUSG00000064284	Cdpf1	2210021J22Rik	cysteine rich, DPF motif domain containing 1	protein-coding
unique_peak2-35378-0-6--3.64748585253182-1.56314192529759	chr17	29093616	29094032	+	0	NA	intron (NM_025888, intron 1 of 7)	B3A|SINE|B2	3663	NM_025888	66989	Mm.435	NM_025888	ENSMUSG00000005936	Kctd20	2410004N11Rik|AI451943|AW541186|D17Ertd562e	potassium channel tetramerisation domain containing 20	protein-coding
unique_peak2-33320-5-5--0.289342836727009-0.909929411522249	chr11	9117473	9117850	+	0	NA	intron (NM_178259, intron 2 of 61)	intron (NM_178259, intron 2 of 61)	25716	NM_178259	268379	Mm.39270	NM_178259	ENSMUSG00000004668	Abca13	9830132L24|A930002G16Rik|AI956815	ATP-binding cassette, sub-family A (ABC1), member 13	protein-coding
common_peak2-24023-14-6-1.09186123830004-1.16633110333236	chr16	22440480	22440902	+	0	NA	Intergenic	Intergenic	-1048	NM_023794	104156	Mm.155708	NM_023794	ENSMUSG00000013089	Etv5	1110005E01Rik|8430401F14Rik|ERM	ets variant 5	protein-coding
common_peak2-26237-12-6-0.841421063030034-1.58711810488664	chr2	28582878	28583314	+	0	NA	intron (NM_001033874, intron 5 of 12)	intron (NM_001033874, intron 5 of 12)	-5702	NR_037271	100526498		NR_037271		Mir3088	mmu-mir-3088	microRNA 3088	ncRNA
common_peak2-26463-63-130--0.595110410466861-2.16358758732552	chr2	75702950	75705011	+	0	NA	intron (NM_172666, intron 8 of 19)	intron (NM_172666, intron 8 of 19)	33746	NM_172666	228061	Mm.31227	NM_172666	ENSMUSG00000042410	Agps	5832437L22|9930035G10Rik|AW123847|Adaps|Adas|Adhaps|Adps|Aldhpsy|bs2	alkylglycerone phosphate synthase	protein-coding
common_peak2-32058-9-13--0.617741515653384-0.459837087125828	chr9	86721230	86721929	+	0	NA	intron (NM_001277982, intron 7 of 29)	intron (NM_001277982, intron 7 of 29)	53653	NM_001277982	20616	Mm.281651	NM_013669	ENSMUSG00000033419	Snap91	91kDa|AP180|F1-20|mKIAA0656	synaptosomal-associated protein 91	protein-coding
unique_peak1-3563-33-11-1.74637506180437-4.10519998339124	chr19	27134905	27136078	+	0	NA	Intergenic	(GGA)n|Simple_repeat|Simple_repeat	-156019	NM_013703	22359	Mm.4141	NM_013703	ENSMUSG00000024924	Vldlr	AA408956|AI451093|AW047288	very low density lipoprotein receptor	protein-coding
unique_peak1-6531-15-4-1.69023665566829-1.97518968347063	chr7	123107816	123108586	+	0	NA	intron (NM_001025559, intron 1 of 15)	intron (NM_001025559, intron 1 of 15)	30399	NM_011445	20679	Mm.323365	NM_011445	ENSMUSG00000051910	Sox6	AI987981|SOX-LZ	SRY (sex determining region Y)-box 6	protein-coding
unique_peak1-5334-8-1-2.00522241794757-2.05605744720049	chr5	89279294	89279827	+	0	NA	Intergenic	L1_Mus1|LINE|L1	-36725	NM_001197147	54403	Mm.41044	NM_018760	ENSMUSG00000060961	Slc4a4	AI835705|NBC|NBC1	solute carrier family 4 (anion exchanger), member 4	protein-coding
unique_peak2-38730-8-8--0.164702583494742-1.00793137938329	chr7	112289327	112289786	+	0	NA	Intergenic	Intergenic	3267	NM_147045	259047	Mm.223428	NM_147045	ENSMUSG00000044120	Olfr683	MOR40-1	olfactory receptor 683	protein-coding
common_peak2-26986-42-51-0.0418896097260921-0.319645149473567	chr2	167931513	167933014	+	0	NA	Intergenic	Intergenic	25759	NM_021409	58220	Mm.292834	NM_021409	ENSMUSG00000044641	Pard6b	AV025615|Par6b	par-6 family cell polarity regulator beta	protein-coding
common_peak2-30563-16-12-0.417823924126969-0.489164546851866	chr7	79300248	79301003	+	0	NA	intron (NM_001024703, intron 17 of 22)	intron (NM_001024703, intron 17 of 22)	150856	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding
common_peak2-27209-15-26--0.742722751607812-0.823046386575433	chr3	41194227	41195260	+	0	NA	Intergenic	Intergenic	102378	NR_040385	78706	Mm.366094	NR_040385		C430002E04Rik	-	RIKEN cDNA C430002E04 gene	ncRNA
common_peak2-26696-26-16-0.840436250908123-1.24110690293937	chr2	126948541	126949183	+	0	NA	intron (NM_144818, intron 7 of 17)	intron (NM_144818, intron 7 of 17)	10828	NM_144818	215387	Mm.29786	NM_144818	ENSMUSG00000034906	Ncaph	A730011O11Rik|Brrn1|HCAP-H|mKIAA0074	non-SMC condensin I complex, subunit H	protein-coding
common_peak1-15541-9-14--0.717277189204299-0.53895475198017	chr4	119293976	119294504	+	0	NA	exon (NM_172699, exon 10 of 13)	exon (NM_172699, exon 10 of 13)	-16097	NM_008190	14915	Mm.2614	NM_008190	ENSMUSG00000023247	Guca2a	Guca2	guanylate cyclase activator 2a (guanylin)	protein-coding
common_peak2-23411-13-7-0.778472030637769-0.817533494790411	chr15	59538680	59539113	+	0	NA	Intergenic	Intergenic	58687	NM_144549	211770	Mm.40298	NM_144549	ENSMUSG00000032501	Trib1	A530090O15Rik|TRB-1|Trb1	tribbles homolog 1 (Drosophila)	protein-coding
common_peak1-9280-49-88--0.469449607941214-1.12735745316731	chr11	88067796	88069199	+	0	NA	Intergenic	B3A|SINE|B2	-39048	NM_028859	74297	Mm.207320	NM_028859	ENSMUSG00000034031	1700106J16Rik	Ccdc182	RIKEN cDNA 1700106J16 gene	protein-coding
unique_peak1-5712-7-2-1.21412832957703-1.45399745587252	chr6	38874127	38874556	+	0	NA	intron (NM_011539, intron 1 of 12)	intron (NM_011539, intron 1 of 12)	5356	NM_011539	21391	Mm.4054	NM_011539	ENSMUSG00000029925	Tbxas1	CYP5|CYP5A1|THAS|TS|TXAS|TXS	thromboxane A synthase 1, platelet	protein-coding
unique_peak1-3846-8-2-1.42025991722641-1.65811743852845	chr2	5032823	5033337	+	0	NA	Intergenic	RMER1C|Other|Other	-25742	NM_028804	74186	Mm.274715	NM_028804	ENSMUSG00000026676	Ccdc3	2310045O21Rik	coiled-coil domain containing 3	protein-coding
common_peak2-21590-9-8-0.0196884049619079-1.03275496310833	chr11	98457816	98458270	+	0	NA	Intergenic	AT_rich|Low_complexity|Low_complexity	-1562	NM_001195544	192852	Mm.342821	NM_001195544		Gm12	-	predicted gene 12	protein-coding
common_peak2-25959-5-4--0.0263084308932156-0.909929411522249	chr19	47901873	47902243	+	0	NA	intron (NM_027559, intron 3 of 37)	intron (NM_027559, intron 3 of 37)	9793	NM_027559	100048534	Mm.29457	NM_027559	ENSMUSG00000044948	Cfap43	4632415N18Rik|4930428C11Rik|4930463G05Rik|AI429486|D19Ertd652e|Wdr96	cilia and flagella associated protein 43	protein-coding
unique_peak2-38460-4-7--1.02346051385325-1.09384600808989	chr7	28801022	28801446	+	0	NA	Intergenic	Intergenic	-2100	NM_001254951	100043772	Mm.129275	NM_001100456		Zfp850	C130069I09Rik|Gm4636	zinc finger protein 850	protein-coding
unique_peak1-1321-10-5-0.771452844287613-1.33892459842472	chr12	8060441	8060922	+	0	NA	Intergenic	Intergenic	76198	NM_009693	238055	Mm.221239	NM_009693	ENSMUSG00000020609	Apob	AI315052|Apo B-100|apob-100|apob-48	apolipoprotein B	protein-coding
unique_peak1-6299-11-1-2.50869358425161-2.83420869758413	chr7	30484811	30485210	+	0	NA	intron (NM_029714, intron 26 of 28)	intron (NM_029714, intron 26 of 28)	27024	NM_029714	76718	Mm.69030	NM_029714	ENSMUSG00000049123	Catsperg2	1700067C01Rik|CATSPERG	catsper channel auxiliary subunit gamma 2	protein-coding
common_peak2-22103-17-19--0.103631756682325-0.301029995663974	chr12	80270334	80271183	+	0	NA	intron (NM_016800, intron 1 of 5)	intron (NM_016800, intron 1 of 5)	2687	NM_016800	53612	Mm.265929	NM_016800	ENSMUSG00000021124	Vti1b	AU015348|GES30|MVti1b|SNARE|Vti1-rp1	vesicle transport through interaction with t-SNAREs 1B	protein-coding
common_peak2-26508-13-7-0.778472030637769-0.817533494790411	chr2	90489812	90490205	+	0	NA	Intergenic	Intergenic	-27364	NM_021512	59015	Mm.24532	NM_021512	ENSMUSG00000051329	Nup160	160kDa|2810011M03Rik|AA414952|AU020188|Gtl-13|Gtl1-13|Gtl13|mKIAA0197	nucleoporin 160	protein-coding
common_peak1-18675-12-27--1.15857893696997-1.38791538138627	chr8	119419191	119419871	+	0	NA	intron (NM_026844, intron 2 of 3)	intron (NM_026844, intron 2 of 3)	25805	NM_026844	66531	Mm.4011	NM_026844	ENSMUSG00000014633	Cmc2	1110046L09Rik|2310061C15Rik|DC13	COX assembly mitochondrial protein 2	protein-coding
unique_peak2-36560-7-12--0.901348887842903-1.31827279259406	chr2	168517533	168518086	+	0	NA	intron (NM_001289446, intron 4 of 27)	intron (NM_001289446, intron 4 of 27)	42030	NM_001289445	11981	Mm.330819	NM_015731	ENSMUSG00000027546	Atp9a	IIa	ATPase, class II, type 9A	protein-coding
common_peak1-10204-18-19--0.00900894365901106-0.306598483909153	chr13	47170735	47171619	+	0	NA	intron (NM_172262, intron 16 of 20)	intron (NM_172262, intron 16 of 20)	30412	NM_025900	110052	Mm.131150	NM_025900	ENSMUSG00000021377	Dek	1810019E15Rik|D13H6S231E	DEK oncogene (DNA binding)	protein-coding
common_peak1-16400-12-14--0.25811461052088-0.309074325783021	chr5	124530822	124531576	+	0	NA	intron (NM_019875, intron 5 of 11)	intron (NM_019875, intron 5 of 11)	14608	NM_019875	56325	Mm.254839	NM_019875	ENSMUSG00000029408	Abcb9	TAPL|mKIAA1520	ATP-binding cassette, sub-family B (MDR/TAP), member 9	protein-coding
unique_peak1-3956-9-8-0.0196884049619079-1.03275496310833	chr2	30618681	30619127	+	0	NA	Intergenic	MTEb|LTR|MaLR	38353	NM_198000	73598	Mm.34166	NM_198000	ENSMUSG00000044320	1700001O22Rik	1700113K14Rik|4930549G18Rik	RIKEN cDNA 1700001O22 gene	protein-coding
common_peak2-30182-53-73--0.0684803532130216-0.307062057408912	chr7	4914702	4915782	+	0	NA	intron (NM_001146329, intron 1 of 3)	intron (NM_001146329, intron 1 of 3)	708	NM_001146329	381836	Mm.297829	NM_001146329	ENSMUSG00000030433	Sbk2	Gm1079|Sgk069	SH3-binding domain kinase family, member 2	protein-coding
common_peak2-32102-11-14--0.398197011356905-0.379391706698377	chr9	99575754	99576321	+	0	NA	Intergenic	Intergenic	34445	NM_019815	56492	Mm.386784	NM_019815		Cldn18	-	claudin 18	protein-coding
common_peak2-29848-24-19-0.471281807880354-0.677583764578261	chr6	97349377	97350326	+	0	NA	intron (NM_145148, intron 5 of 23)	intron (NM_145148, intron 5 of 23)	-147077	NM_001081157	320502	Mm.68163	NM_001081157	ENSMUSG00000044086	Lmod3	5430424A14Rik	leiomodin 3 (fetal)	protein-coding
common_peak2-22009-29-44--0.379563015714564-0.524158758825513	chr12	56520837	56521832	+	0	NA	Intergenic	Intergenic	21522	NM_011968	26443	Mm.30210	NM_011968	ENSMUSG00000021024	Psma6	IOTA	proteasome (prosome, macropain) subunit, alpha type 6	protein-coding
common_peak2-26786-11-15--0.491306415748387-0.435191258261915	chr2	146855911	146856474	+	0	NA	intron (NM_011917, intron 13 of 29)	intron (NM_011917, intron 13 of 29)	17396	NM_011917	24128	Mm.3065	NM_011917	ENSMUSG00000027433	Xrn2	-	5'-3' exoribonuclease 2	protein-coding
common_peak2-30848-30-46--0.384913442185765-0.566504029620424	chr7	133793869	133795351	+	0	NA	intron (NM_029339, intron 1 of 9)	intron (NM_029339, intron 1 of 9)	1787	NM_029339	75565	Mm.45686	NM_029339	ENSMUSG00000030714	Ccdc101	1700023O11Rik|9530025I05Rik	coiled-coil domain containing 101	protein-coding
common_peak2-31271-12-16--0.4386868561627-0.368541233333383	chr8	71592117	71592865	+	0	NA	intron (NM_153054, intron 5 of 16)	MTD|LTR|MaLR	-20144	NM_007509	11966	Mm.249096	NM_007509	ENSMUSG00000006273	Atp6v1b2	AI194269|AI790362|Atp6b2|HO57|R74844	ATPase, H+ transporting, lysosomal V1 subunit B2	protein-coding
common_peak1-15698-9-9--0.132314688483142-1.03275496310833	chr4	139575375	139575848	+	0	NA	Intergenic	MERVL_2A-int|LTR|ERVL	-51670	NM_173427	242721	Mm.60400	NM_173427	ENSMUSG00000078234	Klhdc7a	B230308G19Rik	kelch domain containing 7A	protein-coding
common_peak2-22828-21-23--0.0154732354549205-0.305650498375555	chr14	20348132	20348881	+	0	NA	Intergenic	Intergenic	73303	NM_001024706	432825	Mm.327147	NM_001024706	ENSMUSG00000095024	Gm5458	EG432825	predicted gene 5458	protein-coding
common_peak1-16521-9-10--0.269818212233077-1.05503135781948	chr5	140705048	140705469	+	0	NA	intron (NM_010752, intron 10 of 17)	intron (NM_010752, intron 10 of 17)	92248	NM_010752	17120	Mm.27250	NM_010752	ENSMUSG00000029554	Mad1l1	AI173502|AW550425|Mad1	MAD1 mitotic arrest deficient 1-like 1	protein-coding
common_peak1-7970-16-9-0.796335547380699-0.844317084070804	chr1	156619954	156620806	+	0	NA	Intergenic	Lx8|LINE|L1	-47330	NM_009782	12290	Mm.267517	NM_009782	ENSMUSG00000004110	Cacna1e	A430040I15|BII|Cach6|Cacnl1a6|Cav2.3|Cchra1|alpha1E	calcium channel, voltage-dependent, R type, alpha 1E subunit	protein-coding
unique_peak1-4267-8-4-0.683294323060208-1.21878474469819	chr2	131761928	131762455	+	0	NA	exon (NM_001278256, exon 4 of 4)	exon (NM_001278256, exon 4 of 4)	-14406	NM_001278257	26434	Mm.180750	NM_023043	ENSMUSG00000027338	Prnd	AI450264|Dpl|PrPLP|doppel	prion protein dublet	protein-coding
common_peak2-23617-44-61--0.13230347581834-0.330479330879757	chr15	82046597	82047960	+	0	NA	Intergenic	Intergenic	-4033	NM_001207021	435145	Mm.41289	NM_001207021	ENSMUSG00000096883	AI848285	Orf26	expressed sequence AI848285	protein-coding
unique_peak1-2015-9-3-1.18961340640422-1.57096726280955	chr15	8866915	8867384	+	0	NA	Intergenic	Intergenic	-50800	NM_198024	223332	Mm.321371	NM_198024		Ranbp3l	C130037N17Rik	RAN binding protein 3-like	protein-coding
common_peak1-18867-42-67--0.345133513383155-0.604904474110885	chr9	21722483	21724088	+	0	NA	promoter-TSS (NM_031874)	promoter-TSS (NM_031874)	-720	NM_031874	19340	Mm.260157	NM_031874	ENSMUSG00000019066	Rab3d	C130057E11Rik	RAB3D, member RAS oncogene family	protein-coding
unique_peak2-32733-9-18--1.05831410703937-0.965105923112245	chr1	163311806	163312756	+	0	NA	Intergenic	Lx6|LINE|L1	-13288	NM_009452	22164	Mm.4994	NM_009452	ENSMUSG00000026700	Tnfsf4	Ath-1|Ath1|CD134L|OX-40L|Ox40l|TXGP1|Txgp1l|gp34	tumor necrosis factor (ligand) superfamily, member 4	protein-coding
unique_peak2-32915-3-6--1.22133801201688-1.08602067057793	chr10	24027830	24028310	+	0	NA	Intergenic	L1_Mur2|LINE|L1	84747	NM_021509	59012	Mm.285934	NM_021509	ENSMUSG00000020000	Moxd1	3230402N08Rik|MNCb-5203	monooxygenase, DBH-like 1	protein-coding
common_peak1-13062-23-21-0.262335885871783-0.416752705545949	chr19	6135238	6136581	+	0	NA	intron (NM_019722, intron 4 of 4)	intron (NM_019722, intron 4 of 4)	5228	NM_019722	56327	Mm.21071	NM_019722		Arl2	2610009M23Rik|AI115441|AW553335	ADP-ribosylation factor-like 2	protein-coding
unique_peak1-6260-18-6-1.50556422917075-2.02801025126771	chr7	19928032	19928975	+	0	NA	Intergenic	B3|SINE|B2	-1917	NM_001127324	13870	Mm.280913	NM_007948	ENSMUSG00000003549	Ercc1	Ercc-1	excision repair cross-complementing rodent repair deficiency, complementation group 1	protein-coding
unique_peak1-2892-8-1-2.00522241794757-2.05605744720049	chr17	44474743	44475274	+	0	NA	Intergenic	Intergenic	149487	NM_172621	224796	Mm.37666	NM_172621	ENSMUSG00000023959	Clic5	5730531E12Rik|B330005L24|Gm322|jbg	chloride intracellular channel 5	protein-coding
unique_peak2-34696-11-34--1.62058943269335-2.97841939682983	chr15	25842755	25843840	+	0	NA	intron (NM_001034851, intron 3 of 8)	MTA_Mm|LTR|MaLR	-20010	NM_001277318	66270	Mm.25311	NM_025459	ENSMUSG00000022270	Fam134b	1810015C04Rik|AU015349	family with sequence similarity 134, member B	protein-coding
common_peak1-7990-9-7-0.18961340640422-1.05908390183068	chr1	162039081	162039693	+	0	NA	intron (NM_177839, intron 15 of 21)	GA-rich|Low_complexity|Low_complexity	-31271	NR_038031	75255	Mm.414845	NR_038030	ENSMUSG00000026729	4930562F07Rik	-	RIKEN cDNA 4930562F07 gene	ncRNA
common_peak1-11796-10-30--1.59778096537811-2.57346781069461	chr16	55973999	55974582	+	0	NA	non-coding (NR_027965, exon 1 of 1)	non-coding (NR_027965, exon 1 of 1)	373	NM_173026	271377	Mm.282814	NM_173026	ENSMUSG00000022601	Zbtb11	9230110G02Rik|ZNF-U69274	zinc finger and BTB domain containing 11	protein-coding
common_peak1-8850-55-46-0.650031019475064-1.73288746707145	chr11	31137517	31139089	+	0	NA	Intergenic	Intergenic	131758	NM_011491	20856	Mm.32506	NM_011491		Stc2	AW125853|Stc2l|mustc2	stanniocalcin 2	protein-coding
unique_peak1-4176-17-5-1.63333383748388-2.19184853030482	chr2	113477181	113477977	+	0	NA	intron (NM_001285459, intron 13 of 16)	intron (NM_001285459, intron 13 of 16)	-47668	NM_001287818	14260	Mm.4938	NM_010230	ENSMUSG00000044042	Fmn1	Fmn|ld	formin 1	protein-coding
unique_peak2-38782-3-7--1.41398308995928-1.23214870625617	chr7	127935630	127936111	+	0	NA	intron (NM_177697, intron 23 of 33)	intron (NM_177697, intron 23 of 33)	-50475	NM_007908	13631	Mm.25997	NM_007908	ENSMUSG00000035064	Eef2k	C86191|eEF-2K	eukaryotic elongation factor-2 kinase	protein-coding
unique_peak2-36333-4-7--1.02346051385325-1.09384600808989	chr2	90839669	90839995	+	0	NA	intron (NM_017368, intron 3 of 14)	intron (NM_017368, intron 3 of 14)	-35952	NM_009023	19400	Mm.1272	NM_009023	ENSMUSG00000002104	Rapsn	43kDa|Nraps|Raps|rapsyn	receptor-associated protein of the synapse	protein-coding
unique_peak2-34540-11-15--0.491306415748387-0.435191258261915	chr14	56057900	56058551	+	0	NA	Intergenic	Intergenic	-39370	NM_001037938	28200	Mm.27427	NM_030686	ENSMUSG00000022210	Dhrs4	AI043103|AI790593|CR|D14Ucla2|NDRD|PHCR|PSCD|RRD|mouNRDR	dehydrogenase/reductase (SDR family) member 4	protein-coding
unique_peak1-5544-9-1-2.18961340640422-2.31132995230379	chr5	142424862	142425447	+	0	NA	intron (NM_177879, intron 8 of 44)	ID_B1|SINE|B4	-452297	NM_199068	17425	Mm.24214	NM_010812	ENSMUSG00000056493	Foxk1	A630048H08Rik|AI463295|ENSMUSG00000075577|Gm10868|Mnf	forkhead box K1	protein-coding
common_peak2-31476-19-32--0.641706792696767-0.800403172662453	chr8	106138285	106139232	+	0	NA	intron (NR_045730, intron 1 of 4)	intron (NR_045730, intron 1 of 4)	11059	NR_045730	71058	Mm.67707	NR_045730		4933400L20Rik	-	RIKEN cDNA 4933400L20 gene	ncRNA
common_peak2-26716-111-102-0.73119326422695-4.12936856657829	chr2	130178203	130179617	+	0	NA	intron (NM_001110513, intron 6 of 16)	intron (NM_001110513, intron 6 of 16)	44455	NM_019696	56264	Mm.112701	NM_019696	ENSMUSG00000027408	Cpxm1	AA986902|Cpx-1|Cpx1|Cpxm	carboxypeptidase X 1 (M14 family)	protein-coding
unique_peak1-1580-14-7-0.899216160357645-0.947446088118041	chr13	32611366	32611997	+	0	NA	Intergenic	Intergenic	-181268	NM_146041	218138	Mm.247143	NM_146041	ENSMUSG00000038372	Gmds	BC031788|C87208	GDP-mannose 4, 6-dehydratase	protein-coding
common_peak2-23234-51-68--0.0336006311755961-0.302638508455059	chr15	8108460	8109986	+	0	NA	3' UTR (NM_133227, exon 35 of 35)	3' UTR (NM_133227, exon 35 of 35)	-9883	NM_001162906	73692	Mm.164436	NM_001162906	ENSMUSG00000039801	2410089E03Rik	4732468D17Rik|b2b012Clo	RIKEN cDNA 2410089E03 gene	protein-coding
common_peak2-23444-37-34-0.396710054540852-0.69337412621609	chr15	64059978	64060853	+	0	NA	intron (NM_001276467, intron 3 of 29)	intron (NM_001276467, intron 3 of 29)	83820	NM_001276462	13196	Mm.277236	NM_010026	ENSMUSG00000022377	Asap1	AV239055|DEF-1|Ddef1|PAP|mKIAA1249|s19	ArfGAP with SH3 domain, ankyrin repeat and PH domain1	protein-coding
common_peak1-16430-27-32--0.0528481684632176-0.301029995663997	chr5	134313648	134314775	+	0	NA	Intergenic	Intergenic	-261407	NM_030719	80909	Mm.45218	NM_030719		Gatsl2	7530428J21Rik|AW742413|Gats|Gatsl1	GATS protein-like 2	protein-coding
common_peak2-23734-92-133-0.0262628932449926-0.308295295599209	chr15	96698825	96700807	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-169687	NM_175121	67760	Mm.46754	NM_175121	ENSMUSG00000022462	Slc38a2	5033402L14Rik|AI316867|ATA2|SAT2|mKIAA1382	solute carrier family 38, member 2	protein-coding
common_peak2-31260-44-56--0.0109971795962061-0.30295167774669	chr8	70872919	70874130	+	0	NA	Intergenic	Intergenic	-18834	NR_038189	73609	Mm.443247	NR_038181	ENSMUSG00000085197	1700125H03Rik	4930510D22Rik	RIKEN cDNA 1700125H03 gene	ncRNA
unique_peak1-2050-17-3-2.21829633820504-3.11807310444576	chr15	27433457	27434141	+	0	NA	intron (NM_020332, intron 1 of 11)	intron (NM_020332, intron 1 of 11)	37367	NM_020332	11732	Mm.265264	NM_020332	ENSMUSG00000022265	Ank	Ankh|D15Ertd221e|ank|mKIAA1581	progressive ankylosis	protein-coding
common_peak1-11060-25-13-1.0544949832875-1.65862513589797	chr15	55693758	55694858	+	0	NA	intron (NM_016667, intron 1 of 6)	MTEb|LTR|MaLR	44196	NM_016667	20649	Mm.309425	NM_016667	ENSMUSG00000060429	Sntb1	-	syntrophin, basic 1	protein-coding
unique_peak1-2529-9-2-1.60465090568306-1.87199725847353	chr16	20939337	20939966	+	0	NA	Intergenic	Intergenic	-205067	NM_009379	21832	Mm.3943	NM_009379	ENSMUSG00000022847	Thpo	Mgdf|Ml|Mpllg|Tpo	thrombopoietin	protein-coding
common_peak1-16118-26-21-0.468467473521165-0.647723624534446	chr5	66089497	66090524	+	0	NA	promoter-TSS (NM_001081321)	promoter-TSS (NM_001081321)	-915	NM_001081321	71521	Mm.278974	NM_027818	ENSMUSG00000029202	Pds5a	9030416H16Rik|E230024D05Rik|mKIAA0648	PDS5, regulator of cohesion maintenance, homolog A (S. cerevisiae)	protein-coding
common_peak1-7833-12-10-0.189344366450341-0.386243247519795	chr1	128103418	128104076	+	0	NA	intron (NM_172484, intron 5 of 14)	B4A|SINE|B4	285757	NM_172484	210356	Mm.377234	NM_172484	ENSMUSG00000049690	Nckap5	8430408F21|D130011D22Rik|E030049G20Rik|Erih1|Erih2|Gm1548|Nap5	NCK-associated protein 5	protein-coding
unique_peak1-3899-9-4-0.867685311516858-1.36011389749466	chr2	20935701	20936214	+	0	NA	Intergenic	Intergenic	45456	NR_033225	433408	Mm.386941	NR_033225		Gm13375	OTTMUSG00000011664	predicted gene 13375	ncRNA
common_peak2-25427-9-5-0.604650905683064-1.21398586181642	chr19	3642619	3642953	+	0	NA	intron (NM_008513, intron 5 of 22)	intron (NM_008513, intron 5 of 22)	43778	NM_008513	16973	Mm.274581	NM_008513	ENSMUSG00000024913	Lrp5	BMND1|HBM|LR3|LRP7|OPPG|mKIAA4142	low density lipoprotein receptor-related protein 5	protein-coding
common_peak1-18005-59-97--0.28934584324263-0.656128265330081	chr7	140855666	140857796	+	0	NA	intron (NM_178115, intron 22 of 24)	intron (NM_178115, intron 22 of 24)	15013	NM_152944	214766	Mm.222952	NM_152944	ENSMUSG00000030981	Mmp21	b2b873Clo	matrix metallopeptidase 21	protein-coding
common_peak2-25146-15-8-0.842239749113344-0.891319708951327	chr18	46311473	46312022	+	0	NA	Intergenic	Intergenic	46725	NM_001170855	28105	Mm.277382	NM_178872	ENSMUSG00000033949	Trim36	D18Wsu100e|haprin	tripartite motif-containing 36	protein-coding
unique_peak2-32821-4-8--1.19338551529556-1.21878474469819	chr1	186581265	186581705	+	0	NA	Intergenic	Intergenic	-25113	NM_008250	15284	Mm.1347	NM_008250	ENSMUSG00000039377	Hlx	Hlx1	H2.0-like homeobox	protein-coding
unique_peak2-35307-3-6--1.22133801201688-1.08602067057793	chr17	13656851	13657241	+	0	NA	Intergenic	Intergenic	-57276	NR_030763	272667	Mm.444718	NR_030763	ENSMUSG00000079711	Smok4a	4930513D10Rik|Smok2c	sperm motility kinase 4A	pseudo
unique_peak1-1766-8-1-2.00522241794757-2.05605744720049	chr13	111877125	111877608	+	0	NA	Intergenic	Intergenic	142273	NR_045908	73129	Mm.417826	NR_045908		3110015C05Rik	-	RIKEN cDNA 3110015C05 gene	ncRNA
common_peak2-26019-44-37-0.57396532112495-1.23216191351736	chr19	58104109	58105255	+	0	NA	intron (NM_181415, intron 27 of 28)	intron (NM_181415, intron 27 of 28)	-20975	NR_049196	100885835		NR_049196		Mir5623	mmu-mir-5623	microRNA mir-5623	ncRNA
common_peak1-14129-26-34--0.201383924786504-0.35535220421655	chr2	130664117	130664883	+	0	NA	intron (NM_029432, intron 1 of 36)	intron (NM_029432, intron 1 of 36)	1346	NM_029432	228602	Mm.271990	NM_029432	ENSMUSG00000027309	4930402H24Rik	2810487F15Rik|AI413763|C78926	RIKEN cDNA 4930402H24 gene	protein-coding
common_peak2-20090-64-67-0.377983560458264-0.920753037356072	chr1	156558485	156559630	+	0	NA	intron (NM_009782, intron 1 of 46)	intron (NM_009782, intron 1 of 46)	13993	NM_009782	12290	Mm.267517	NM_009782	ENSMUSG00000004110	Cacna1e	A430040I15|BII|Cach6|Cacnl1a6|Cav2.3|Cchra1|alpha1E	calcium channel, voltage-dependent, R type, alpha 1E subunit	protein-coding
common_peak2-21040-11-7-0.508693584251613-1.21681515183528	chr11	35951201	35951609	+	0	NA	intron (NM_011856, intron 12 of 28)	intron (NM_011856, intron 12 of 28)	-157814	NM_170779	211652	Mm.31267	NM_170779		Wwc1	AA408228|AU017197|BC037006|Kibra|mKIAA0869	WW, C2 and coiled-coil domain containing 1	protein-coding
common_peak1-16023-10-13--0.450939577048835-0.386243247519795	chr5	35893506	35894090	+	0	NA	Intergenic	MTC-int|LTR|MaLR	23921	NM_030208	78890	Mm.98522	NM_030208		Trmt44	2310079F23Rik|Mettl19	tRNA methyltransferase 44	protein-coding
unique_peak2-38170-4-6--0.830815435910851-0.989110657569874	chr6	89364707	89365106	+	0	NA	intron (NM_001167736, intron 5 of 6)	MTEa|LTR|MaLR	-52299	NM_008881	18844	Mm.3789	NM_008881	ENSMUSG00000030084	Plxna1	2600013D04Rik|NOV|PlexA1|Plxn1|mKIAA4053	plexin A1	protein-coding
common_peak2-31871-5-8--0.874305337448166-1.10484139239135	chr9	54643598	54644042	+	0	NA	Intergenic	Intergenic	31265	NM_013496	12903	Mm.34797	NM_013496	ENSMUSG00000032291	Crabp1	AI326249|CRABP-I|Crabp-1|CrabpI|Rbp-5	cellular retinoic acid binding protein I	protein-coding
common_peak1-14242-34-34-0.2527855100563-0.484230028934922	chr2	154372315	154373455	+	0	NA	exon (NM_021546, exon 7 of 13)	exon (NM_021546, exon 7 of 13)	-1755	NM_029305	75480	Mm.440434	NM_029305	ENSMUSG00000038523	1700003F12Rik	-	RIKEN cDNA 1700003F12 gene	protein-coding
common_peak2-27570-9-8-0.0196884049619079-1.03275496310833	chr3	98267017	98267527	+	0	NA	Intergenic	ETnERV2-int|LTR|ERVK	47123	NM_001111336	15495	Mm.14309	NM_008294	ENSMUSG00000095143	Hsd3b4	-	hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 4	protein-coding
common_peak2-27597-7-8--0.370834171144123-1.00793137938329	chr3	102757215	102757561	+	0	NA	intron (NM_201622, intron 3 of 10)	intron (NM_201622, intron 3 of 10)	10668	NM_201622	381463	Mm.331269	NM_198658	ENSMUSG00000048938	Nr1h5	Fxrb	nuclear receptor subfamily 1, group H, member 5	protein-coding
common_peak1-8549-7-5-0.214128329577033-1.01466476204226	chr10	93341592	93342081	+	0	NA	intron (NM_019648, intron 5 of 11)	intron (NM_019648, intron 5 of 11)	12111	NM_019648	56307	Mm.289329	NM_019648	ENSMUSG00000036112	Metap2	4930584B20Rik|A930035J23Rik|AI047573|AL024412|AU014659|Amp2|Mnpep|p67|p67eIF2	methionine aminopeptidase 2	protein-coding
common_peak1-7515-7-10--0.660340788339108-1.12966497611638	chr1	21079420	21079870	+	0	NA	Intergenic	Intergenic	-10339	NM_177409	170829	Mm.185680	NM_177409		Tram2	C330003D03Rik	translocating chain-associating membrane protein 2	protein-coding
unique_peak1-7318-8-2-1.42025991722641-1.65811743852845	chr9	120757524	120758175	+	0	NA	Intergenic	RSINE1|SINE|B4	66519	NR_040742	76402	Mm.436588	NR_040742		1700020M21Rik	-	RIKEN cDNA 1700020M21 gene	ncRNA
common_peak2-21481-14-10-0.439784541720347-0.519648556297791	chr11	88180936	88181446	+	0	NA	intron (NM_054043, intron 10 of 13)	intron (NM_054043, intron 10 of 13)	14916	NR_039545	100628571		NR_039545	miRBase:MI0016973	Mir378b	mmu-mir-378b	microRNA 378b	ncRNA
unique_peak1-1308-12-1-2.64877598508764-3.36932189928148	chr11	120500188	120500815	+	0	NA	intron (NM_144795, intron 7 of 7)	intron (NM_144795, intron 7 of 7)	4483	NM_144795	209027	Mm.127731	NM_144795	ENSMUSG00000025140	Pycr1	-	pyrroline-5-carboxylate reductase 1	protein-coding
common_peak1-16546-25-22-0.338287949288093-0.51032171069054	chr5	144014137	144015194	+	0	NA	3' UTR (NM_017467, exon 7 of 7)	3' UTR (NM_017467, exon 7 of 7)	17036	NM_017467	54201	Mm.6666	NM_017467	ENSMUSG00000046658	Zfp316	Emzf1|Mzf3|Znf316	zinc finger protein 316	protein-coding
common_peak2-23348-126-169-0.228269263814123-0.832686413397024	chr15	40654087	40656619	+	0	NA	intron (NM_011766, intron 3 of 7)	intron (NM_011766, intron 3 of 7)	168765	NM_011766	22762	Mm.39496	NM_011766	ENSMUSG00000022306	Zfpm2	B330005D23Rik|FOG-2|FOG2	zinc finger protein, multitype 2	protein-coding
common_peak1-15773-11-22--1.0148683718054-1.11267835143409	chr4	153957180	153957711	+	0	NA	intron (NM_027504, intron 1 of 16)	intron (NM_027504, intron 1 of 16)	53031	NR_045643	320939	Mm.436738	NR_045643		5930403L14Rik	-	RIKEN cDNA 5930403L14 gene	ncRNA
common_peak1-7775-74-113--0.117003437186134-0.364793960577973	chr1	93477813	93479862	+	0	NA	Intergenic	Intergenic	41180	NM_023046	65247	Mm.234152	NM_023046	ENSMUSG00000026311	Asb1	1700029O08Rik|1700054C17Rik|AI426616|AI851378|mKIAA1146	ankyrin repeat and SOCS box-containing 1	protein-coding
unique_peak2-36850-4-6--0.830815435910851-0.989110657569874	chr3	89304730	89305153	+	0	NA	Intergenic	RMER13A|LTR|ERVK	-19145	NM_080466	140493	Mm.120250	NM_080466		Kcnn3	KCa2.3|SK3|SKCA3	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	protein-coding
unique_peak1-1542-12-7-0.648775985087639-0.697979855752659	chr13	20432887	20433475	+	0	NA	intron (NM_080288, intron 13 of 21)	L1M2|LINE|L1	-131678	NM_198093	140580	Mm.342392	NM_080288	ENSMUSG00000041112	Elmo1	6330578D22Rik|C230095H21Rik|CED-12	engulfment and cell motility 1	protein-coding
common_peak1-12011-92-220--0.695550475688667-4.64579049293273	chr17	14992175	14993679	+	0	NA	intron (NM_175173, intron 23 of 24)	Lx7|LINE|L1	87202	NM_175173	71682	Mm.122698	NM_175173	ENSMUSG00000046991	Wdr27	0610012K18Rik	WD repeat domain 27	protein-coding
unique_peak1-2263-10-4-1.03448725012141-1.5150158574804	chr15	77912632	77913107	+	0	NA	intron (NM_007583, intron 1 of 3)	intron (NM_007583, intron 1 of 3)	36841	NM_007583	12300	Mm.277338	NM_007583		Cacng2	AW060990|B230105C07Rik|B930041E13Rik|stargazer|stargazin|stg|wag|waggler	calcium channel, voltage-dependent, gamma subunit 2	protein-coding
unique_peak1-6843-8-1-2.00522241794757-2.05605744720049	chr8	84033896	84034472	+	0	NA	intron (NM_001297596, intron 2 of 24)	B4|SINE|B4	167723	NM_001297593	234515	Mm.324468	NM_001024617	ENSMUSG00000037940	Inpp4b	E130107I17Rik	inositol polyphosphate-4-phosphatase, type II	protein-coding
unique_peak2-34520-4-8--1.19338551529556-1.21878474469819	chr14	54097670	54098024	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-187768	NM_001205242	100568452	Mm.213248	NM_001205242		A430107P09Rik	Va10	RIKEN cDNA A430107P09 gene	protein-coding
common_peak1-10711-13-12-0.0780323124966764-0.334470287753051	chr14	60378379	60379066	+	0	NA	intron (NM_015803, intron 32 of 35)	intron (NM_015803, intron 32 of 35)	134604	NM_145463	219134	Mm.275409	NM_145463	ENSMUSG00000044461	Shisa2	9430059P22Rik|MAd2|Tmem46|mShisa|shisa	shisa homolog 2 (Xenopus laevis)	protein-coding
unique_peak1-2610-6-1-1.5653981103803-1.56314192529759	chr16	33786921	33787397	+	0	NA	Intergenic	Intergenic	-6964	NM_010739	17063	Mm.3177	NM_010739	ENSMUSG00000022824	Muc13	114/A10|14/A10|AI159736|Lrrp|Ly64|NJ-1	mucin 13, epithelial transmembrane	protein-coding
unique_peak1-7260-9-1-2.18961340640422-2.31132995230379	chr9	89869790	89870245	+	0	NA	intron (NM_011245, intron 9 of 26)	intron (NM_011245, intron 9 of 26)	65404	NM_001039655	19417	Mm.44561	NM_011245	ENSMUSG00000032356	Rasgrf1	AI844718|CDC25|CDC25Mm|Gnrp|Grf1|Grfbeta|P190-A|Ras-GRF1|p190|p190RhoGEF	RAS protein-specific guanine nucleotide-releasing factor 1	protein-coding
unique_peak1-3791-19-7-1.40268732666169-1.89173646618542	chr19	56588366	56589202	+	0	NA	Intergenic	Intergenic	33928	NM_018831	55947	Mm.2805	NM_018831	ENSMUSG00000025077	Dclre1a	2810043H12Rik|AU022226|Pso2|Smn1a|Snm1|mKIAA0086	DNA cross-link repair 1A, PSO2 homolog (S. cerevisiae)	protein-coding
common_peak1-19084-8-16--1.08224042330277-0.891319708951328	chr9	70835352	70835920	+	0	NA	Intergenic	Intergenic	-53021	NM_008280	15450	Mm.390187	NM_008280	ENSMUSG00000032207	Lipc	AI256194|HL|Hpl	lipase, hepatic	protein-coding
unique_peak2-32883-6-10--0.894033508256995-1.21398586181642	chr10	12788238	12788548	+	0	NA	Intergenic	Intergenic	-22201	NM_009538	22634	Mm.287857	NM_009538	ENSMUSG00000019817	Plagl1	Lot1|Zac1	pleiomorphic adenoma gene-like 1	protein-coding
unique_peak2-34668-6-11--1.01956439034085-1.32595962126035	chr15	4025912	4026583	+	0	NA	intron (NM_024188, intron 7 of 16)	ORR1B1|LTR|MaLR	-48841	NR_028266	414066	Mm.394461	NR_028266		BC037032	-	cDNA Sequence BC037032	ncRNA
common_peak2-26836-18-46--1.24166970044929-2.58657013435545	chr2	152830708	152831701	+	0	NA	intron (NM_001083618, intron 14 of 14)	B1F|SINE|Alu	9915	NM_178939	68559	Mm.12746	NM_178939	ENSMUSG00000027472	Pdrg1	1110004D19Rik|AU020945|AV006589|Pdrg	p53 and DNA damage regulated 1	protein-coding
common_peak2-29642-55-61-0.250423560765827-0.573287859224671	chr6	65778555	65779739	+	0	NA	intron (NM_027547, intron 2 of 14)	intron (NM_027547, intron 2 of 14)	50191	NM_027547	70779	Mm.263355	NM_027547	ENSMUSG00000029913	Prdm5	4432417F03Rik|6530401I24Rik|AI197291|E130112L17Rik|PFM2	PR domain containing 5	protein-coding
unique_peak1-3628-8-2-1.42025991722641-1.65811743852845	chr19	37100667	37101175	+	0	NA	intron (NM_001290827, intron 10 of 10)	intron (NM_001290827, intron 10 of 10)	100352	NM_001080706	107182	Mm.295062	NM_001080706	ENSMUSG00000040565	Btaf1	AI414500|AI447930|E430027O22Rik|TAF170	BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, (Mot1 homolog, S. cerevisiae)	protein-coding
unique_peak1-6729-9-4-0.867685311516858-1.36011389749466	chr8	44882890	44883268	+	0	NA	Intergenic	L1Md_T|LINE|L1	-98234	NM_001079931	384814	Mm.491652	NM_001079931		Gm5347	EG384814	predicted gene 5347	protein-coding
common_peak1-11959-15-25--0.688274967585436-0.73354163167379	chr17	6270344	6271054	+	0	NA	intron (NM_001033178, intron 1 of 16)	CpG	229	NM_001033178	77106	Mm.381893	NM_001033178	ENSMUSG00000038141	Tmem181a	5930418K15Rik|C76977|Gpr178|Tmem181|mKIAA1423	transmembrane protein 181A	protein-coding
unique_peak1-4343-7-4-0.477162735410827-1.09384600808989	chr2	153826154	153826617	+	0	NA	TTS (NM_001080811)	TTS (NM_001080811)	-7627	NM_008953	19194	Mm.29197	NM_008953	ENSMUSG00000042459	Bpifa2	Bpifa2e|Psp	BPI fold containing family A, member 2	protein-coding
common_peak1-15573-20-27--0.319280137466411-0.412012472183092	chr4	126753262	126753878	+	0	NA	Intergenic	Intergenic	-1057	NM_001285885	100177	Mm.276096	NM_177462	ENSMUSG00000042408	Zmym6	9330177P20Rik|AI593204|AI661340|D4Wsu24e|Zfp258	zinc finger, MYM-type 6	protein-coding
unique_peak1-5036-10-1-2.35641534500877-2.57096726280955	chr4	133085098	133085687	+	0	NA	intron (NM_133707, intron 2 of 3)	intron (NM_133707, intron 2 of 3)	10514	NM_133707	69073	Mm.299081	NM_133707	ENSMUSG00000037600	Kdf1	1810019J16Rik	keratinocyte differentiation factor 1	protein-coding
common_peak2-22500-26-20-0.535581669379702-0.738267116931592	chr13	51945753	51946798	+	0	NA	Intergenic	B4|SINE|B4	4231	NM_011817	23882	Mm.281298	NM_011817	ENSMUSG00000021453	Gadd45g	AI327420|C86281|CR6|DDIT2|OIG37	growth arrest and DNA-damage-inducible 45 gamma	protein-coding
common_peak2-24125-11-6-0.701338662194009-1.32595962126035	chr16	33873513	33873948	+	0	NA	intron (NM_010580, intron 3 of 14)	intron (NM_010580, intron 3 of 14)	43979	NM_001145884	16419	Mm.6424	NM_010580	ENSMUSG00000022817	Itgb5	AA475909|AI874634|ESTM23|[b]-5|[b]5|[b]5A|[b]5B|beta-5|beta5	integrin beta 5	protein-coding
common_peak2-23222-17-10-0.75886471956774-0.917676348953458	chr15	5108064	5108661	+	0	NA	intron (NM_001013367, intron 1 of 8)	B1_Mur1|SINE|Alu	14501	NM_001013367	105787	Mm.207004	NM_001013367	ENSMUSG00000050697	Prkaa1	AI194361|AI450832|AL024255|AMPKalpha1|C130083N04Rik	protein kinase, AMP-activated, alpha 1 catalytic subunit	protein-coding
unique_peak1-1787-10-3-1.35641534500877-1.75805390616669	chr14	16955061	16955705	+	0	NA	Intergenic	L1VL4|LINE|L1	-126445	NM_021504	59007	Mm.258381	NM_021504	ENSMUSG00000021785	Ngly1	1110002C09Rik|PNGase|Png1	N-glycanase 1	protein-coding
common_peak2-32192-4-8--1.19338551529556-1.21878474469819	chr9	118994836	118995275	+	0	NA	intron (NR_121571, intron 1 of 14)	intron (NR_121571, intron 1 of 14)	2324	NM_001293648	18799	Mm.23963	NM_019676	ENSMUSG00000010660	Plcd1	AW212592|C79986	phospholipase C, delta 1	protein-coding
common_peak2-32132-23-21-0.262335885871783-0.416752705545949	chr9	106353271	106354453	+	0	NA	exon (NM_029631, exon 3 of 4)	exon (NM_029631, exon 3 of 4)	-2307	NM_021567	59092	Mm.286394	NM_021567	ENSMUSG00000023495	Pcbp4	1200003L19Rik|AlphaCP-4	poly(rC) binding protein 4	protein-coding
common_peak1-12658-13-7-0.778472030637769-0.817533494790411	chr18	36399396	36400116	+	0	NA	Intergenic	MERVL_2A-int|LTR|ERVL	-41060	NM_008989	19290	Mm.231802	NM_008989		Pura	CAGER-1|Pur-alpha|ssCRE-BP	purine rich element binding protein A	protein-coding
unique_peak1-2926-10-8-0.186490343566457-1.078512453669	chr17	50623715	50624300	+	0	NA	Intergenic	Intergenic	-24865	NM_013880	224860	Mm.217362	NM_013880	ENSMUSG00000038910	Plcl2	PLC-L2|PRIP-2|Plce2|mKIAA1092	phospholipase C-like 2	protein-coding
unique_peak2-38530-2-11--2.50241675698448-2.32232533660526	chr7	45800147	45800610	+	0	NA	Intergenic	Intergenic	719526	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak1-12420-24-62--1.1840700207322-3.16061338235695	chr17	74528204	74529381	+	0	NA	Intergenic	Intergenic	-131536	NM_053188	94224	Mm.38933	NM_053188	ENSMUSG00000038541	Srd5a2	5ART2|S5AR 2	steroid 5 alpha-reductase 2	protein-coding
common_peak1-10167-7-14--1.10779976531033-0.817533494790411	chr13	38204820	38205262	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-38122	NM_023842	109620	Mm.355327	NM_023842	ENSMUSG00000054889	Dsp	2300002E22Rik|5730453H04Rik|AA407887|AA407888|AW109828|DP	desmoplakin	protein-coding
unique_peak1-2118-12-5-1.06381348436648-1.78669045979184	chr15	41727105	41727788	+	0	NA	Intergenic	MERVL-int|LTR|ERVL	-26180	NM_175456	223513	Mm.148913	NM_175456	ENSMUSG00000042895	Abra	C130068O12Rik|STARS	actin-binding Rho activating protein	protein-coding
common_peak2-29767-10-8-0.186490343566457-1.078512453669	chr6	87335396	87335818	+	0	NA	intron (NM_026860, intron 3 of 5)	intron (NM_026860, intron 3 of 5)	3322	NM_026860	68888	Mm.46387	NM_026860	ENSMUSG00000030048	Gkn3	1190003M12Rik	gastrokine 3	protein-coding
unique_peak2-36158-5-10--1.16381195464315-1.33892459842472	chr2	26021304	26021967	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-25609	NM_001256521	109299	Mm.389259	NM_001256521		C330006A16Rik	AI551216	RIKEN cDNA C330006A16 gene	protein-coding
unique_peak1-1005-13-3-1.77847203063777-2.58603100924543	chr11	72582000	72582563	+	0	NA	3' UTR (NM_009671, exon 25 of 25)	3' UTR (NM_009671, exon 25 of 25)	27060	NM_001024926	192986	Mm.194755	NM_001024926	ENSMUSG00000057778	Cyb5d2	9330151E16Rik|Gm2	cytochrome b5 domain containing 2	protein-coding
common_peak1-17176-14-6-1.09186123830004-1.16633110333236	chr6	121183410	121184027	+	0	NA	Intergenic	L1M2|LINE|L1	-12206	NM_011909	24110	Mm.326911	NM_011909	ENSMUSG00000030107	Usp18	1110058H21Rik|AW047653|UBP43|Ubp15	ubiquitin specific peptidase 18	protein-coding
common_peak2-23909-107-158-0.04116397738904-0.325308732029547	chr16	4878642	4881478	+	0	NA	promoter-TSS (NM_145359)	promoter-TSS (NM_145359)	-209	NM_145359	207740	Mm.268895	NM_145359		Ubald1	1500031H01Rik|BC013706|Fam100a	UBA-like domain containing 1	protein-coding
unique_peak1-2731-7-0-2.79909083029819-2.40823996531185	chr16	95848096	95848576	+	0	NA	Intergenic	Intergenic	-75678	NM_011809	23872	Mm.290207	NM_011809	ENSMUSG00000022895	Ets2	AU022856|Ets-2	E26 avian leukemia oncogene 2, 3' domain	protein-coding
unique_peak2-36270-3-10--1.87341470859657-1.75805390616669	chr2	60369904	60370371	+	0	NA	intron (NM_008867, intron 2 of 29)	intron (NM_008867, intron 2 of 29)	21228	NM_008867	18779	Mm.5092	NM_008867	ENSMUSG00000054580	Pla2r1	Pla2-r|Pla2g1br|Pla2r	phospholipase A2 receptor 1	protein-coding
common_peak1-14507-17-11-0.633333837483882-0.769930178837768	chr3	19429141	19429828	+	0	NA	intron (NM_025489, intron 1 of 4)	intron (NM_025489, intron 1 of 4)	-1763	NM_001163537	66326	Mm.45615	NM_025489	ENSMUSG00000027606	Dnajc5b	1700008A05Rik	DnaJ (Hsp40) homolog, subfamily C, member 5 beta	protein-coding
common_peak1-13252-62-42-0.984486704099987-3.52584576600981	chr19	32303570	32305289	+	0	NA	intron (NM_144792, intron 4 of 9)	intron (NM_144792, intron 4 of 9)	-18926	NM_001168526	208449	Mm.329810	NM_144792	ENSMUSG00000040451	Sgms1	9530058O11Rik|AI841905|C80702|Mob|Sms1|Sor1|Tmem23	sphingomyelin synthase 1	protein-coding
common_peak2-28782-29-47--0.472672420106045-0.683734619884041	chr5	53998436	53999678	+	0	NA	intron (NM_001277116, intron 3 of 12)	intron (NM_001277116, intron 3 of 12)	17332	NM_001080927	19664	Mm.209292	NM_009035	ENSMUSG00000039191	Rbpj	AI843960|CBF1|Igkjrb|Igkrsbp|RBP-J|RBP-J kappa|RBPjk|Rbpsuh	recombination signal binding protein for immunoglobulin kappa J region	protein-coding
unique_peak1-4525-8-2-1.42025991722641-1.65811743852845	chr3	30260628	30261054	+	0	NA	intron (NM_021442, intron 1 of 2)	intron (NM_021442, intron 1 of 2)	147568	NM_021442	14013	Mm.56965	NM_007963	ENSMUSG00000027684	Mecom	D630039M04Rik|Evi-1|Evi1|Jbo|Mds|Mds1|Mds1-Evi1|Prdm3|Znfpr1b1	MDS1 and EVI1 complex locus	protein-coding
unique_peak2-33799-7-12--0.901348887842903-1.31827279259406	chr11	120506424	120507041	+	0	NA	TTS (NM_001204820)	TTS (NM_001204820)	-1748	NM_144795	209027	Mm.127731	NM_144795	ENSMUSG00000025140	Pycr1	-	pyrroline-5-carboxylate reductase 1	protein-coding
common_peak2-27754-13-7-0.778472030637769-0.817533494790411	chr3	127837665	127838019	+	0	NA	intron (NR_045704, intron 3 of 5)	intron (NR_045704, intron 3 of 5)	96681	NR_045704	402774	Mm.209170	NR_045704		D030025E07Rik	-	RIKEN cDNA D030025E07 gene	ncRNA
common_peak1-18226-15-28--0.845816244571916-1.02077663956385	chr8	25976227	25976829	+	0	NA	intron (NM_153397, intron 17 of 21)	intron (NM_153397, intron 17 of 21)	-41687	NM_001272059	11499	Mm.143889	NM_007401	ENSMUSG00000031554	Adam5	tMDC II|tMDCII	a disintegrin and metallopeptidase domain 5	protein-coding
common_peak1-15747-34-45--0.141493429055747-0.323497957212832	chr4	149425975	149426854	+	0	NA	Intergenic	B1_Mur4|SINE|Alu	-16149	NR_029751	723848		NR_029751	miRBase:MI0000584	Mir34a	Mirn34a|mmu-mir-34a	microRNA 34a	ncRNA
common_peak2-30602-13-14--0.12841856497075-0.301029995663977	chr7	82867356	82868231	+	0	NA	intron (NM_029332, intron 19 of 36)	intron (NM_029332, intron 19 of 36)	-125431	NM_001122780	207952	Mm.206223	NM_029652	ENSMUSG00000055652	Klhl25	2810402K13Rik|BC027373|Enc-1	kelch-like 25	protein-coding
common_peak1-9893-56-62-0.258315901939326-0.569301204470908	chr12	85598566	85600215	+	0	NA	Intergenic	Intergenic	-26856	NM_029880	77219	Mm.246127	NM_029880	ENSMUSG00000072946	Ptgr2	1810016I24Rik|9130222H03Rik|9630002F03Rik|AI838763|B830026H24Rik|PGR-2|PRG-2|Zadh1	prostaglandin reductase 2	protein-coding
unique_peak1-2709-9-1-2.18961340640422-2.31132995230379	chr16	91826298	91826850	+	0	NA	intron (NM_001110275, intron 14 of 28)	intron (NM_001110275, intron 14 of 28)	96958	NM_010587	16443	Mm.40546	NM_010587	ENSMUSG00000022957	Itsn1	AA517634|AA545208|AI316805|AI839402|AI848451|Ehsh1|Ese1|Itsn|Sh3p17	intersectin 1 (SH3 domain protein 1A)	protein-coding
common_peak2-22577-43-77--0.502839033338546-1.10096426460187	chr13	66932551	66933593	+	0	NA	Intergenic	Intergenic	73214	NM_026219	67530	Mm.379136	NM_026219	ENSMUSG00000021520	Uqcrb	2210415M14Rik|QP-C|QPC|UQBC|UQBP|UQPC	ubiquinol-cytochrome c reductase binding protein	protein-coding
common_peak1-10767-34-40-0.0245165223831822-0.311623594475992	chr14	70577076	70578527	+	0	NA	promoter-TSS (NM_145978)	promoter-TSS (NM_145978)	-322	NM_145978	213019	Mm.283968	NM_145978	ENSMUSG00000022090	Pdlim2	4732462F18Rik|Slim	PDZ and LIM domain 2	protein-coding
common_peak2-32187-20-30--0.466121525795682-0.569352520859861	chr9	116313370	116314542	+	0	NA	Intergenic	Intergenic	-229475	NM_009371	21813	Mm.172346	NM_009371	ENSMUSG00000032440	Tgfbr2	1110020H15Rik|AU042018|DNIIR|RIIDN|TBR-II|TbetaR-II|TbetaRII	transforming growth factor, beta receptor II	protein-coding
unique_peak1-7068-13-7-0.778472030637769-0.817533494790411	chr9	14274766	14275591	+	0	NA	intron (NM_173433, intron 1 of 1)	L1_Mus2|LINE|L1	29748	NM_173433	244694	Mm.240457	NM_173433	ENSMUSG00000053914	Kdm4d	4932416A15|Jmjd2d	lysine (K)-specific demethylase 4D	protein-coding
common_peak1-9411-15-9-0.690236655668294-0.732381977911291	chr11	101003421	101004084	+	0	NA	Intergenic	B3|SINE|B2	-13446	NM_134028	103768	Mm.142348	NM_134028	ENSMUSG00000045007	Tubg2	AI504772|Tubgl	tubulin, gamma 2	protein-coding
common_peak1-16515-18-25--0.38752056691274-0.421916810733234	chr5	140515182	140515901	+	0	NA	intron (NM_010752, intron 17 of 17)	intron (NM_010752, intron 17 of 17)	131644	NM_175522	243312	Mm.237102	NM_175522	ENSMUSG00000048988	Elfn1	A930017N06Rik|AI197272|Ppp1r28	leucine rich repeat and fibronectin type III, extracellular 1	protein-coding
unique_peak1-2767-12-1-2.64877598508764-3.36932189928148	chr17	6005660	6006247	+	0	NA	intron (NM_001113352, intron 7 of 25)	intron (NM_001113352, intron 7 of 25)	-1627	NM_001290698	20975	Mm.236068	NM_011523	ENSMUSG00000023805	Synj2	AI481647|SJ2|mKIAA0348	synaptojanin 2	protein-coding
unique_peak2-36154-4-6--0.830815435910851-0.989110657569874	chr2	25287399	25287824	+	0	NA	intron (NM_007379, intron 2 of 47)	intron (NM_007379, intron 2 of 47)	3417	NM_007379	11305	Mm.2210	NM_007379	ENSMUSG00000026944	Abca2	AI413825|Abc2|D2H0S1474E|mKIAA1062	ATP-binding cassette, sub-family A (ABC1), member 2	protein-coding
common_peak2-22488-9-6-0.382258484346616-1.11707584880836	chr13	49581153	49581413	+	0	NA	intron (NM_025495, intron 5 of 7)	(GAAA)n|Simple_repeat|Simple_repeat	-18896	NM_001012324	407800	Mm.386931	NM_001012324	ENSMUSG00000043631	Ecm2	9030618O22Rik|BC065151|tenonectin	extracellular matrix protein 2, female organ and adipocyte specific	protein-coding
common_peak2-22333-19-31--0.597312673338314-0.721233599456203	chr13	23561588	23562571	+	0	NA	Intergenic	Intergenic	-4309	NM_013483	12231	Mm.1420	NM_013483	ENSMUSG00000000706	Btn1a1	Btn	butyrophilin, subfamily 1, member A1	protein-coding
unique_peak2-38334-2-6--1.72480917832092-1.26211192963361	chr7	125566611	125567037	+	0	NA	intron (NM_138649, intron 5 of 7)	Lx9|LINE|L1	20242	NM_138649	110058	Mm.156558	NM_138649	ENSMUSG00000058420	Syt17	Bk	synaptotagmin XVII	protein-coding
common_peak2-23727-11-8-0.338768582809301-1.14218153353838	chr15	94900167	94900588	+	0	NA	intron (NM_178789, intron 6 of 7)	intron (NM_178789, intron 6 of 7)	79372	NR_015482	100043315	Mm.159041	NR_015482		LOC100043315	-	uncharacterized LOC100043315	ncRNA
common_peak2-28517-58-61-0.341753624503622-0.804964541269708	chr5	90930933	90932108	+	0	NA	intron (NM_007423, intron 8 of 14)	intron (NM_007423, intron 8 of 14)	11780	NM_007423	11576	Mm.358570	NM_007423	ENSMUSG00000054932	Afp	-	alpha fetoprotein	protein-coding
unique_peak2-34965-0-7--3.84013093047421-1.80617997398389	chr15	97137915	97138325	+	0	NA	intron (NM_172293, intron 3 of 5)	CT-rich|Low_complexity|Low_complexity	-60402	NM_001164602	105827	Mm.24005	NM_178114	ENSMUSG00000048218	Amigo2	AI415330|AMIGO-2|AW208913|Ali1	adhesion molecule with Ig like domain 2	protein-coding
common_peak2-24806-69-128--0.416084808164522-1.2314467837561	chr17	69382808	69384385	+	0	NA	Intergenic	B4|SINE|B4	-122554	NM_013813	13823	Mm.131135	NM_013813	ENSMUSG00000024044	Epb4.1l3	4.1B|DAL1P|Dal1|Epb41l3|NBL3	erythrocyte protein band 4.1-like 3	protein-coding
common_peak1-11789-21-26--0.185398236897233-0.318406410381916	chr16	50431456	50432353	+	0	NA	intron (NM_027444, intron 1 of 16)	CpG	598	NM_027444	70508	Mm.28940	NM_027444	ENSMUSG00000022641	Bbx	5530401J07Rik|5730403O13Rik	bobby sox homolog (Drosophila)	protein-coding
common_peak1-16713-25-30--0.0923464050417691-0.304710633611958	chr6	29272019	29273143	+	0	NA	intron (NM_207258, intron 2 of 6)	intron (NM_207258, intron 2 of 6)	3441	NM_001289664	330277	Mm.87624	NM_207258	ENSMUSG00000039742	Fam71f1	GARI-L1|Gm764|NYD-SP18	family with sequence similarity 71, member F1	protein-coding
common_peak2-24433-8-10--0.454209200689727-1.078512453669	chr17	21474962	21475368	+	0	NA	Intergenic	L1Md_F3|LINE|L1	24184	NM_134200	171234	Mm.405416	NM_134200	ENSMUSG00000058030	Vmn1r237	V1rf3|Vfrf3	vomeronasal 1 receptor 237	protein-coding
unique_peak1-3204-6-1-1.5653981103803-1.56314192529759	chr18	56036159	56036534	+	0	NA	Intergenic	Intergenic	-555440	NM_026240	107022	Mm.24356	NM_026240	ENSMUSG00000001700	Gramd3	9030613F08Rik|9130427A09Rik|AW061306|NS3TP2	GRAM domain containing 3	protein-coding
unique_peak2-36070-4-8--1.19338551529556-1.21878474469819	chr19	53571222	53571697	+	0	NA	Intergenic	PB1D7|SINE|Alu	-32173	NR_028427	381232	Mm.248624	NR_028427	ENSMUSG00000097636	5830416P10Rik	4833407H14Rik|5430437C04Rik|ENSMUSG00000074788|Gm10758	RIKEN cDNA 5830416P10 gene	ncRNA
common_peak1-14435-44-51-0.121453116427443-0.373449689110125	chr2	181187056	181188464	+	0	NA	intron (NM_028125, intron 1 of 2)	RMER6A|LTR|ERVK	6371	NM_028125	72147	Mm.486504	NM_027656	ENSMUSG00000027583	Zbtb46	2610019F01Rik|4933406L05Rik|BZEL|Btbd4	zinc finger and BTB domain containing 46	protein-coding
common_peak2-21915-13-8-0.608547029195456-0.660903317613904	chr12	13269185	13269664	+	0	NA	Intergenic	Lx4A|LINE|L1	-6509	NM_027706	71169	Mm.177520	NM_027706	ENSMUSG00000020576	Nbas	4933425L03Rik|Nag	neuroblastoma amplified sequence	protein-coding
unique_peak1-3442-50-14-2.13404972087043-8.27192293468565	chr19	7301061	7302946	+	0	NA	3' UTR (NM_027643, exon 8 of 8)	3' UTR (NM_027643, exon 8 of 8)	-9897	NM_007750	12868	Mm.14022	NM_007750	ENSMUSG00000035885	Cox8a	COX8L	cytochrome c oxidase subunit VIIIa	protein-coding
unique_peak2-34273-4-12--1.72390023199434-1.85743853830261	chr13	67451147	67451650	+	0	NA	intron (NM_001038651, intron 1 of 3)	L1_Rod|LINE|L1	10110	NM_001038651	629016	Mm.440800	NM_001038651	ENSMUSG00000098905	Zfp953	E130120F12Rik	zinc finger protein 953	protein-coding
unique_peak1-5825-27-7-1.99154595089524-4.07016573886257	chr6	72237389	72238808	+	0	NA	Intergenic	Charlie13a|DNA|Charlie	-16506	NM_001282071	20388	Mm.46033	NM_147779	ENSMUSG00000056370	Sftpb	AI562151|SF-B|SP-B|Sftp-3|Sftp3	surfactant associated protein B	protein-coding
common_peak2-21811-12-25--1.05166373305345-1.1381569562463	chr11	119040544	119041002	+	0	NA	intron (NM_172443, intron 3 of 11)	intron (NM_172443, intron 3 of 11)	-25322	NR_105899	102465563		NR_105899		Mir6934	mmu-mir-6934	microRNA mir-6934	ncRNA
common_peak2-26600-43-58--0.100079863838139-0.318326940901209	chr2	112454418	112455788	+	0	NA	intron (NM_001165935, intron 1 of 4)	intron (NM_001165935, intron 1 of 4)	55264	NM_001165935	74268	Mm.315125	NM_028844		Aven	1700013A01Rik|1700056A21Rik|mAven-L|mAven-S	apoptosis, caspase activation inhibitor	protein-coding
common_peak2-22029-21-30--0.384707045120639-0.446094173747089	chr12	65036252	65036799	+	0	NA	Intergenic	Intergenic	539360	NM_001163271	623046	Mm.189552	NM_001163271	ENSMUSG00000043060	Fscb	EG623046	fibrous sheath CABYR binding protein	protein-coding
common_peak2-27856-16-7-1.11826364226806-1.23399803405144	chr3	152554982	152555379	+	0	NA	intron (NM_012028, intron 2 of 4)	B4A|SINE|B4	89991	NM_012028	26938	Mm.40915	NM_012028		St6galnac5	AI851940|Siat7e	ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	protein-coding
common_peak1-18576-18-12-0.612479433087259-0.739965416525508	chr8	105880668	105881600	+	0	NA	Intergenic	MLT1A0|LTR|MaLR	-9700	NR_036588	69794	Mm.396139	NR_036588		1600027J07Rik	-	RIKEN cDNA 1600027J07 gene	ncRNA
common_peak1-13943-32-38--0.00631019964258872-0.303850168981672	chr2	90904153	90905233	+	0	NA	intron (NM_001290765, intron 6 of 9)	intron (NM_001290765, intron 6 of 9)	5779	NM_026721	68427	Mm.192375	NM_026721	ENSMUSG00000002105	Slc39a13	1100001L14Rik|AA387663|ZIP-13|ZIP13	solute carrier family 39 (metal ion transporter), member 13	protein-coding
unique_peak1-4860-23-10-1.26233588587178-1.90052685918624	chr4	135298173	135299082	+	0	NA	intron (NM_178257, intron 4 of 6)	L1MEb|LINE|L1	14553	NM_178257	230828	Mm.261647	NM_178257		Il22ra1	9130219A07Rik|ENSMUSG00000073746|IL-22R|Il22r	interleukin 22 receptor, alpha 1	protein-coding
common_peak1-9780-25-19-0.539921810457743-0.756750750680359	chr12	56779911	56780754	+	0	NA	intron (NM_001286263, intron 33 of 41)	B1_Mur3|SINE|Alu	80428	NM_020287	56856	Mm.114886	NM_020287	ENSMUSG00000045440	Insm2	Mlt1	insulinoma-associated 2	protein-coding
unique_peak2-32716-3-8--1.58390809140159-1.39487600375387	chr1	156420692	156421135	+	0	NA	intron (NM_009782, intron 6 of 46)	intron (NM_009782, intron 6 of 46)	152137	NM_009782	12290	Mm.267517	NM_009782	ENSMUSG00000004110	Cacna1e	A430040I15|BII|Cach6|Cacnl1a6|Cav2.3|Cchra1|alpha1E	calcium channel, voltage-dependent, R type, alpha 1E subunit	protein-coding
unique_peak2-35384-6-8--0.60452689106201-1.03789460276074	chr17	29457781	29458244	+	0	NA	intron (NM_023734, intron 1 of 6)	intron (NM_023734, intron 1 of 6)	2185	NM_023734	74116	Mm.30950	NM_023734	ENSMUSG00000024011	Pi16	1200009H11Rik|Cripi|PI-16	peptidase inhibitor 16	protein-coding
unique_peak2-38204-12-13--0.158578936969966-0.301029995663979	chr6	113002674	113003584	+	0	NA	intron (NM_008188, intron 3 of 9)	intron (NM_008188, intron 3 of 9)	6808	NM_008188	14911	Mm.781	NM_008188	ENSMUSG00000030264	Thumpd3	AW556087|Gt(ROSA)26asSor|Gtrosa26as	THUMP domain containing 3	protein-coding
common_peak1-17504-69-73-0.385689081629782-1.03923963685319	chr7	25753615	25755164	+	0	NA	TTS (NM_010261)	TTS (NM_010261)	705	NR_106013	102465633		NR_106013		Mir7046	mmu-mir-7046	microRNA mir-7046	ncRNA
common_peak1-9533-53-86--0.301970483432799-0.612703452660502	chr11	116030008	116031473	+	0	NA	Intergenic	Intergenic	-1248	NM_172571	217335	Mm.35241	NM_172571	ENSMUSG00000020776	Fbf1	1110033G01Rik|5930413D20|mKIAA1863	Fas (TNFRSF6) binding factor 1	protein-coding
common_peak1-15368-13-20--0.613845392140992-0.532159081577619	chr4	59238723	59239386	+	0	NA	Intergenic	URR1B|DNA|MER1_type	-33869	NR_105031	101055769	Mm.421401	NR_105031		LOC101055769	-	uncharacterized LOC101055769	ncRNA
common_peak1-8022-14-13-0.0918612383000403-0.332077462497413	chr1	168709354	168710075	+	0	NA	Intergenic	Intergenic	-97738	NM_172844	240894	Mm.246610	NM_172844	ENSMUSG00000026560	Fmo9	4831428F09Rik	flavin containing monooxygenase 9	protein-coding
common_peak2-25824-11-10-0.0492619656143161-0.31137425193576	chr19	38594060	38594523	+	0	NA	Intergenic	Intergenic	-4396	NM_019588	74055	Mm.34031	NM_019588	ENSMUSG00000024998	Plce1	4933403A21Rik|PLCepsilon|Plce|mKIAA1516	phospholipase C, epsilon 1	protein-coding
unique_peak2-39104-3-6--1.22133801201688-1.08602067057793	chr8	79162589	79162921	+	0	NA	Intergenic	L1_Mus3|LINE|L1	261317	NR_028579	100039211	Mm.367571	NR_028579	ENSMUSG00000074235	Gm10649	ENSMUSG00000074235	predicted gene 10649	ncRNA
unique_peak1-4937-10-1-2.35641534500877-2.57096726280955	chr4	64306580	64307109	+	0	NA	Intergenic	Intergenic	-478364	NM_021362	18491	Mm.317854	NM_021362	ENSMUSG00000028370	Pappa	8430414N03Rik|IGFBP-4ase|PAG1|PAPP-A	pregnancy-associated plasma protein A	protein-coding
common_peak2-19947-23-12-1.02132778636799-1.44787515926925	chr1	131278895	131279754	+	0	NA	intron (NM_172485, intron 1 of 27)	intron (NM_172485, intron 1 of 27)	109443	NM_172485	210417	Mm.380518	NM_172485	ENSMUSG00000042581	Thsd7b	1700074E13Rik|B930082A18|D130067I03Rik	thrombospondin, type I, domain containing 7B	protein-coding
common_peak2-25381-8-6-0.197867495889966-1.03789460276074	chr18	84849253	84849659	+	0	NA	intron (NM_023149, intron 3 of 11)	Lx6|LINE|L1	1995	NM_001289531	66054	Mm.29646	NM_023149	ENSMUSG00000024644	Cndp2	0610010E05Rik|C76600|Cn2|Dip-2|Pep-1|Pep1	CNDP dipeptidase 2 (metallopeptidase M20 family)	protein-coding
unique_peak1-762-8-2-1.42025991722641-1.65811743852845	chr10	121438880	121439423	+	0	NA	intron (NM_001242411, intron 1 of 21)	L1MB7|LINE|L1	45220	NM_001242411	117600	Mm.288698	NM_001081037	ENSMUSG00000020121	Srgap1	4930572H05Rik|Arhgap13	SLIT-ROBO Rho GTPase activating protein 1	protein-coding
common_peak2-32135-18-37--0.935008362215234-1.41893667893732	chr9	106684879	106685969	+	0	NA	intron (NM_030730, intron 1 of 21)	intron (NM_030730, intron 1 of 21)	6120	NM_030730	81000	Mm.246689	NM_030730	ENSMUSG00000040661	Rad54l2	Arip4|D130058C05|G630026H09Rik|Srisnf2l	RAD54 like 2 (S. cerevisiae)	protein-coding
common_peak2-25498-10-13--0.450939577048835-0.386243247519795	chr19	5424297	5424863	+	0	NA	promoter-TSS (NM_001256515)	promoter-TSS (NM_001256515)	399	NM_024176	66556	Mm.275446	NM_024176	ENSMUSG00000024914	Drap1	2310074H19Rik|NC2-alpha	Dr1 associated protein 1 (negative cofactor 2 alpha)	protein-coding
common_peak1-18338-22-53--1.10760339707606-2.53311195323981	chr8	64849554	64850454	+	0	NA	Intergenic	Intergenic	-248014	NM_011922	26359	Mm.42179	NM_011922	ENSMUSG00000031635	Anxa10	-	annexin A10	protein-coding
common_peak1-8335-25-33--0.225612935905233-0.357106932979091	chr10	44078171	44079206	+	0	NA	promoter-TSS (NR_035450)	promoter-TSS (NR_035450)	-794	NR_035450	100316688		NR_035450		Mir1929	mmu-mir-1929	microRNA 1929	ncRNA
common_peak1-14081-8-10--0.454209200689727-1.078512453669	chr2	121473616	121474107	+	0	NA	intron (NM_172673, intron 1 of 14)	intron (NM_172673, intron 1 of 14)	141402	NM_001290986	241627	Mm.293284	NM_030234	ENSMUSG00000027242	Wdr76	5830411K18Rik|6030457D09|AA517836	WD repeat domain 76	protein-coding
unique_peak2-36853-4-10--1.48289213249054-1.5150158574804	chr3	89359752	89360294	+	0	NA	intron (NM_080466, intron 1 of 7)	intron (NM_080466, intron 1 of 7)	35937	NM_080466	140493	Mm.120250	NM_080466		Kcnn3	KCa2.3|SK3|SKCA3	potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3	protein-coding
unique_peak2-32918-2-6--1.72480917832092-1.26211192963361	chr10	24589745	24590088	+	0	NA	exon (NM_027347, exon 1 of 29)	exon (NM_027347, exon 1 of 29)	124	NM_027347	70208	Mm.28020	NM_027347	ENSMUSG00000019984	Med23	130kDa|3000002A17Rik|Crsp3|ESTM7|Sur2|X83317|mKIAA1216	mediator complex subunit 23	protein-coding
common_peak2-30846-53-71--0.0289519890263836-0.301029995663963	chr7	133708680	133709569	+	0	NA	intron (NM_146200, intron 2 of 20)	intron (NM_146200, intron 2 of 20)	756	NM_146200	56347	Mm.22776	NM_146200	ENSMUSG00000030738	Eif3c	110kDa|3230401O13Rik|Eif3s8|NIPIL(A3)|NipilA3|Xs|Xsl	eukaryotic translation initiation factor 3, subunit C	protein-coding
common_peak1-11154-13-9-0.456543935750406-0.53895475198017	chr15	74995164	74995782	+	0	NA	Intergenic	L1_Mm|LINE|L1	-53094	NM_001099217	100041546	Mm.482110	NM_001099217	ENSMUSG00000022584	Ly6c2	Ly-6C.2|Ly-6C2	lymphocyte antigen 6 complex, locus C2	protein-coding
common_peak1-8822-16-10-0.658832023630764-0.699649909729472	chr11	22857913	22858863	+	0	NA	intron (NM_144514, intron 1 of 2)	intron (NM_144514, intron 1 of 2)	-13617	NM_011663	22183	Mm.29542	NM_011663	ENSMUSG00000044068	Zrsr1	D11Ncvs75|Irlgs2|SP2|U2af1-rs1|U2afbp-rs	zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1	protein-coding
common_peak1-13205-123-130-0.562400248469356-2.98650032057278	chr19	23140111	23142813	+	0	NA	Intergenic	Intergenic	-74254	NM_010638	16601	Mm.291595	NM_010638	ENSMUSG00000033863	Klf9	2310051E17Rik|AA589643|BTEB-1|Bteb1|ENSMUSG00000055440|Gm9971	Kruppel-like factor 9	protein-coding
common_peak1-12836-12-27--1.15857893696997-1.38791538138627	chr18	70471565	70472202	+	0	NA	Intergenic	L1Md_T|LINE|L1	-67645	NM_029346	75577	Mm.58214	NM_029346	ENSMUSG00000024512	Dynap	2310002L13Rik	dynactin associated protein	protein-coding
common_peak2-23645-27-59--0.915344644713283-2.06706089299028	chr15	84231624	84233448	+	0	NA	intron (NM_001163145, intron 4 of 4)	intron (NM_001163145, intron 4 of 4)	44991	NM_001163145	72301	Mm.275387	NM_001163145	ENSMUSG00000062760	1810041L15Rik	Kiaa1644	RIKEN cDNA 1810041L15 gene	protein-coding
common_peak2-30224-10-8-0.186490343566457-1.078512453669	chr7	3275581	3276003	+	0	NA	Intergenic	B1_Mus1|SINE|Alu	-13247	NM_001093764	50918	Mm.29874	NM_016969	ENSMUSG00000068566	Myadm	D7Wsu62e	myeloid-associated differentiation marker	protein-coding
common_peak2-27726-9-7-0.18961340640422-1.05908390183068	chr3	123204864	123205350	+	0	NA	intron (NM_008939, intron 9 of 10)	B2_Mm2|SINE|B2	5877	NR_028573	100306957	Mm.260791	NR_028573	ENSMUSG00000092730	Snora24	ACA24	small nucleolar RNA, H/ACA box 24	snoRNA
common_peak2-29279-34-46--0.172520324676372-0.340524918943711	chr5	142959204	142961372	+	0	NA	TTS (NM_001289588)	TTS (NM_001289588)	20403	NM_172725	231855	Mm.78250	NM_172725	ENSMUSG00000039623	Ap5z1	C330006K01Rik	adaptor-related protein complex 5, zeta 1 subunit	protein-coding
unique_peak2-32946-3-10--1.87341470859657-1.75805390616669	chr10	40511570	40512015	+	0	NA	intron (NM_177793, intron 4 of 4)	intron (NM_177793, intron 4 of 4)	91157	NM_027879	71713	Mm.46063	NM_027879	ENSMUSG00000038446	Cdc40	1200003H23Rik|EHB3|PRP17	cell division cycle 40	protein-coding
common_peak2-19687-23-28--0.136213490618491-0.317118655902079	chr1	58713071	58714284	+	0	NA	Intergenic	Intergenic	4192	NR_045007	100504501	Mm.440933	NR_045007		Gm20257	-	caspase 8 pseudogene	pseudo
common_peak1-11110-57-51-0.565593321937837-1.4558581450023	chr15	62118657	62120537	+	0	NA	Intergenic	Intergenic	-68591	NR_003523	67552	Mm.484027	NM_026230		H2afy3	4933432H23Rik	H2A histone family, member Y3	pseudo
unique_peak1-4531-11-0-3.50869358425161-3.61235994796777	chr3	32433698	32434207	+	0	NA	intron (NM_024200, intron 3 of 17)	B1_Mur2|SINE|Alu	5548	NM_024200	67414	Mm.290414	NM_024200	ENSMUSG00000027668	Mfn1	2310002F04Rik|6330416C07Rik|D3Ertd265e|HR2|mKIAA4032	mitofusin 1	protein-coding
unique_peak2-36251-7-6--0.00826409175941478-0.97990265578305	chr2	50877208	50877583	+	0	NA	Intergenic	Intergenic	112191	NR_033595	227885	Mm.301654	NR_033595	ENSMUSG00000083270	Gm13498	OTTMUSG00000012426	heat shock protein 90 alpha (cytosolic), class B member 1 pseudogene	pseudo
common_peak1-13155-128-87-1.20557438344078-10.6641800217233	chr19	10561647	10563726	+	0	NA	Intergenic	Intergenic	-5299	NM_133689	67752	Mm.25939	NM_133689	ENSMUSG00000035179	Ppp1r32	4930579J09Rik|AU015816|IIIG9|IIIG9L|IIIG9S	protein phosphatase 1, regulatory subunit 32	protein-coding
unique_peak1-5116-9-5-0.604650905683064-1.21398586181642	chr5	5439487	5440012	+	0	NA	intron (NM_001200025, intron 6 of 6)	Lx2|LINE|L1	39394	NM_001200025	381716	Mm.276086	NM_001200025	ENSMUSG00000079666	1700015F17Rik	Gm1686	RIKEN cDNA 1700015F17 gene	protein-coding
common_peak2-30553-8-11--0.579740082773585-1.14218153353838	chr7	75416244	75416621	+	0	NA	intron (NR_040340, intron 2 of 3)	(TA)n|Simple_repeat|Simple_repeat	-2293	NM_001013811	434197	Mm.216193	NM_001013811		Fam169b	EG434197	family with sequence similarity 169, member B	protein-coding
common_peak1-14382-125-184-0.0924439185432391-0.397368598818444	chr2	168206074	168207706	+	0	NA	Intergenic	MTD|LTR|MaLR	-112059	NM_001081134	241794	Mm.425102	NM_001081134	ENSMUSG00000074575	Kcng1	AW536275|OTTMUSG00000016048	potassium voltage-gated channel, subfamily G, member 1	protein-coding
unique_peak1-6326-10-7-0.356415345008769-1.12966497611638	chr7	45922550	45923087	+	0	NA	Intergenic	Intergenic	597086	NR_073038	100861861	Mm.60620	NR_073038	ENSMUSG00000094233	Gm21276	-	predicted gene, 21276	pseudo
common_peak1-16838-19-16-0.315224485411347-0.448200956659575	chr6	51523637	51524428	+	0	NA	intron (NM_028035, intron 2 of 6)	B1F1|SINE|Alu	29510	NM_001127348	71982	Mm.294166	NM_028035	ENSMUSG00000038301	Snx10	2410004M09Rik	sorting nexin 10	protein-coding
unique_peak2-37617-9-8-0.0196884049619079-1.03275496310833	chr5	64862100	64862498	+	0	NA	Intergenic	MIR|SINE|MIR	-3118	NR_040681	69999	Mm.261413	NR_040681		1700027F09Rik	-	RIKEN cDNA 1700027F09 gene	ncRNA
common_peak1-13999-43-42-0.356298430821605-0.680499470139652	chr2	104705714	104706809	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-16254	NM_178695	228413	Mm.259609	NM_178695	ENSMUSG00000027171	Prrg4	9930111I18Rik|TMG4	proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	protein-coding
common_peak1-8786-39-34-0.486478229974187-0.89292906939411	chr11	12409161	12410647	+	0	NA	Intergenic	IAPEz-int|LTR|ERVK	-44941	NM_001282993	12808	Mm.22847	NM_172496	ENSMUSG00000020173	Cobl	-	cordon-bleu WH2 repeat	protein-coding
common_peak2-30186-34-36-0.172615161372316-0.401350871931209	chr7	19561579	19562572	+	0	NA	Intergenic	Intergenic	-10798	NM_194064	378430	Mm.277153	NM_194064	ENSMUSG00000051965	Nanos2	nos2	nanos homolog 2 (Drosophila)	protein-coding
common_peak1-13821-8-19--1.31670567693979-1.30305656033811	chr2	57115223	57115746	+	0	NA	intron (NM_010274, intron 1 of 16)	intron (NM_010274, intron 1 of 16)	24691	NM_010274	14571	Mm.3711	NM_010274	ENSMUSG00000026827	Gpd2	AA408484|AI448216|AU021455|AW494132|GPDH|Gdm1|Gpd-m|Gpdh-m|TISP38	glycerol phosphate dehydrogenase 2, mitochondrial	protein-coding
common_peak2-26574-15-7-1.01216475055566-1.08658567012551	chr2	104688766	104689219	+	0	NA	intron (NM_178695, intron 2 of 5)	intron (NM_178695, intron 2 of 5)	1015	NM_178695	228413	Mm.259609	NM_178695	ENSMUSG00000027171	Prrg4	9930111I18Rik|TMG4	proline rich Gla (G-carboxyglutamic acid) 4 (transmembrane)	protein-coding
common_peak2-22410-13-23--0.806490470083387-0.781208772652439	chr13	34709113	34709829	+	0	NA	Intergenic	L1Md_T|LINE|L1	35079	NM_025831	66895	Mm.28943	NM_025831	ENSMUSG00000021411	Pxdc1	1300014I06Rik	PX domain containing 1	protein-coding
unique_peak1-3429-16-2-2.53330114154691-3.78760380288747	chr19	6480778	6481532	+	0	NA	exon (NM_020253, exon 10 of 23)	exon (NM_020253, exon 10 of 23)	61915	NM_009203	20521	Mm.391146	NM_009203	ENSMUSG00000061742	Slc22a12	AI987855|OAT4L|Rst|Slc22al2|URAT1	solute carrier family 22 (organic anion/cation transporter), member 12	protein-coding
common_peak2-22874-6-8--0.60452689106201-1.03789460276074	chr14	30951285	30951805	+	0	NA	intron (NM_001083616, intron 9 of 46)	intron (NM_001083616, intron 9 of 46)	115726	NM_175343	218865	Mm.259916	NM_172264	ENSMUSG00000015970	Chdh	AU041472|D630034H06Rik	choline dehydrogenase	protein-coding
unique_peak2-34322-6-7--0.434601889619698-0.97990265578305	chr13	96470065	96470462	+	0	NA	intron (NM_010170, intron 1 of 1)	(CATATA)n|Simple_repeat|Simple_repeat	3388	NM_010170	14064	Mm.440952	NM_010170	ENSMUSG00000021675	F2rl2	F730031A08|PAR3	coagulation factor II (thrombin) receptor-like 2	protein-coding
unique_peak2-39623-1-20--4.0193744329955-4.8766546284749	chr9	95640147	95640752	+	0	NA	intron (NM_011643, intron 2 of 12)	intron (NM_011643, intron 2 of 12)	10328	NM_011643	22063	Mm.149633	NM_011643	ENSMUSG00000032839	Trpc1	Mtrp1|Trp1|Trrp1	transient receptor potential cation channel, subfamily C, member 1	protein-coding
common_peak2-26338-7-7--0.200909169701811-0.97990265578305	chr2	35199904	35200267	+	0	NA	Intergenic	Intergenic	-7556	NM_013515	13830	Mm.295284	NM_013515	ENSMUSG00000026880	Stom	Epb7.2	stomatin	protein-coding
unique_peak2-35841-4-8--1.19338551529556-1.21878474469819	chr18	70244092	70244582	+	0	NA	intron (NM_001082553, intron 2 of 6)	intron (NM_001082553, intron 2 of 6)	-31314	NM_030554	80718	Mm.246753	NM_030554	ENSMUSG00000024511	Rab27b	2310021G14Rik|B130064M09Rik	RAB27B, member RAS oncogene family	protein-coding
common_peak1-17879-11-25--1.19174613388948-1.51503956548638	chr7	116444815	116445382	+	0	NA	intron (NM_054103, intron 13 of 13)	intron (NM_054103, intron 13 of 13)	-131276	NM_057173	109594	Mm.360145	NM_057173	ENSMUSG00000036111	Lmo1	Rbtn-1|Rbtn1|Ttg1	LIM domain only 1	protein-coding
unique_peak2-38154-4-9--1.34538860874061-1.36011389749466	chr6	86585610	86586044	+	0	NA	Intergenic	Lx5|LINE|L1	7659	NM_026414	67855	Mm.183043	NM_026414	ENSMUSG00000033508	Asprv1	2300003P22Rik|AA986851|SASP|SASPase|Taps	aspartic peptidase, retroviral-like 1	protein-coding
common_peak2-24678-7-22--1.72447112575882-2.07034318903805	chr17	40934773	40935556	+	0	NA	Intergenic	L1Md_T|LINE|L1	-4069	NM_009420	22024	Mm.1296	NM_009420	ENSMUSG00000023930	Crisp2	CRISP-2|GAPDL5|Tpx-1|Tpx1	cysteine-rich secretory protein 2	protein-coding
unique_peak2-39298-4-13--1.83081543591085-2.04196296489515	chr8	123345378	123345986	+	0	NA	Intergenic	Intergenic	85406	NM_008320	15900	Mm.334861	NM_008320	ENSMUSG00000041515	Irf8	AI893568|ICSBP|IRF-8|Icsbp1|Myls	interferon regulatory factor 8	protein-coding
common_peak2-25570-10-10--0.103016273628528-0.301029995663987	chr19	6950493	6950992	+	0	NA	Intergenic	B1F1|SINE|Alu	-18041	NM_001081291	78317	Mm.329596	NM_198008	ENSMUSG00000047810	Ccdc88b	2610041P08Rik|Ccdc88	coiled-coil domain containing 88B	protein-coding
common_peak1-11914-14-21--0.560215458279653-0.519193887192484	chr17	33718193	33718808	+	0	NA	intron (NM_053214, intron 8 of 27)	B1_Mus2|SINE|Alu	25848	NM_053214	17916	Mm.42019	NM_053214	ENSMUSG00000024300	Myo1f	C330006B10Rik	myosin IF	protein-coding
common_peak1-10489-22-28--0.210696890040167-0.337923771396236	chr13	119661794	119662424	+	0	NA	Intergenic	MT2B|LTR|ERVL	158603	NM_008002	14165	Mm.317323	NM_008002	ENSMUSG00000021732	Fgf10	AEY17|BB213776|Fgf-10|Gsfaey17	fibroblast growth factor 10	protein-coding
common_peak2-19679-9-6-0.382258484346616-1.11707584880836	chr1	58391906	58392312	+	0	NA	intron (NM_001008419, intron 23 of 35)	B4A|SINE|B4	56939	NM_001008419	213043	Mm.414292	NM_001008419	ENSMUSG00000079554	Aox2	Aoh3|Aox3l1	aldehyde oxidase 2	protein-coding
unique_peak2-35683-7-11--0.785871670422967-1.21681515183528	chr18	16806725	16807386	+	0	NA	exon (NM_007664, exon 4 of 16)	exon (NM_007664, exon 4 of 16)	160503	NM_007664	12558	Mm.257437	NM_007664	ENSMUSG00000024304	Cdh2	CDHN|N-cadherin|Ncad	cadherin 2	protein-coding
unique_peak1-7193-11-3-1.50869358425161-1.95434855131066	chr9	63888678	63889248	+	0	NA	intron (NR_040726, intron 1 of 2)	intron (NR_040726, intron 1 of 2)	309	NR_040726	73397	Mm.48745	NR_040726	ENSMUSG00000093616	1700055C04Rik	-	RIKEN cDNA 1700055C04 gene	ncRNA
common_peak1-13211-23-19-0.399839409621718-0.538442145997695	chr19	24055040	24055760	+	0	NA	intron (NM_001114174, intron 6 of 10)	intron (NM_001114174, intron 6 of 10)	50109	NM_001114174	381217	Mm.426078	NM_001114174	ENSMUSG00000071604	Fam189a2	AI414343|AI666772|Gm967	family with sequence similarity 189, member A2	protein-coding
common_peak1-17143-19-13-0.595332404604082-0.713635438203849	chr6	116635865	116636598	+	0	NA	Intergenic	MERVL-int|LTR|ERVL	-12377	NM_178045	213391	Mm.257931	NM_178045	ENSMUSG00000042129	Rassf4	3830411C14Rik|AD037|AI586137	Ras association (RalGDS/AF-6) domain family member 4	protein-coding
common_peak2-31835-18-19--0.00900894365901106-0.306598483909153	chr9	44920214	44921019	+	0	NA	intron (NR_033547, intron 1 of 2)	intron (NR_033547, intron 1 of 2)	-5343	NM_001014761	72821	Mm.229373	NM_001014761	ENSMUSG00000070304	Scn2b	2810451E09Rik|AI840361|Gm183	sodium channel, voltage-gated, type II, beta	protein-coding
common_peak1-17284-34-44--0.109784569328409-0.311130777923626	chr6	135322273	135323748	+	0	NA	intron (NM_001288627, intron 1 of 4)	intron (NM_001288627, intron 1 of 4)	5499	NM_001288627	13730	Mm.182785	NM_010128	ENSMUSG00000030208	Emp1	I-8-09|TMP	epithelial membrane protein 1	protein-coding
unique_peak2-32812-4-7--1.02346051385325-1.09384600808989	chr1	184141075	184141465	+	0	NA	Intergenic	MurERV4-int|LTR|ERVK	-53041	NM_001166728	625823	Mm.479992	NM_001166728		Vmn1r1	EG625823|Gm6628	vomeronasal 1 receptor 1	protein-coding
unique_peak1-6913-9-0-3.18961340640422-3.01029995663981	chr8	105963895	105964387	+	0	NA	Intergenic	Intergenic	-92707	NR_036588	69794	Mm.396139	NR_036588		1600027J07Rik	-	RIKEN cDNA 1600027J07 gene	ncRNA
common_peak1-15040-22-18-0.399356591643819-0.549581527953406	chr3	121818865	121820009	+	0	NA	intron (NM_007378, intron 16 of 49)	intron (NM_007378, intron 16 of 49)	72059	NM_007378	11304	Mm.3918	NM_007378	ENSMUSG00000028125	Abca4	AW050280|Abc10|Abcr|D430003I15Rik|RmP	ATP-binding cassette, sub-family A (ABC1), member 4	protein-coding
common_peak1-9325-51-36-0.865470459973623-2.35878721299899	chr11	95087518	95089379	+	0	NA	Intergenic	(TG)n|Simple_repeat|Simple_repeat	-34395	NM_053093	93670	Mm.40085	NM_053093	ENSMUSG00000020872	Tac4	AW489379|PPT-C	tachykinin 4	protein-coding
unique_peak1-253-7-1-1.79909083029819-1.80617997398389	chr1	91624121	91624615	+	0	NA	intron (NM_001037136, intron 10 of 16)	RLTR21|LTR|ERVK	-43901	NR_015540	74403	Mm.444291	NR_015540		4933400F21Rik	1700091C04Rik|4930565K10Rik	RIKEN cDNA 4933400F21 gene	ncRNA
common_peak2-28024-16-10-0.658832023630764-0.699649909729472	chr4	49632014	49632729	+	0	NA	Intergenic	RLTR19-int|LTR|ERVK	-12561	NM_001163263	109331	Mm.24765	NM_182999	ENSMUSG00000028309	Rnf20	4833430L21Rik|AW540162|C79397|mKIAA4116	ring finger protein 20	protein-coding
common_peak2-28735-14-20--0.493101262421116-0.456667090758524	chr5	36582063	36582638	+	0	NA	intron (NM_030889, intron 1 of 26)	L1Md_T|LINE|L1	35680	NM_175249	76943	Mm.44242	NM_175249	ENSMUSG00000043430	Psapl1	2310020A21Rik	prosaposin-like 1	protein-coding
common_peak1-12746-21-10-1.11005764662894-1.59083646988122	chr18	57685049	57685938	+	0	NA	intron (NR_015541, intron 1 of 1)	intron (NR_015541, intron 1 of 1)	7913	NR_015541	74916	Mm.444721	NR_015541	ENSMUSG00000085800	1700066O22Rik	4930500F21Rik|4930515O13Rik|4930542C11Rik	RIKEN cDNA 1700066O22 gene	ncRNA
common_peak2-32407-40-83--0.733341740027663-1.97656708196217	chrX	151520026	151521473	+	0	NA	Intergenic	L1Md_T|LINE|L1	3584	NM_020015	17137	Mm.377096	NM_020015	ENSMUSG00000096644	Magea1	Mage-a1	melanoma antigen, family A, 1	protein-coding
common_peak1-19227-13-12-0.0780323124966764-0.334470287753051	chr9	107627074	107627764	+	0	NA	Intergenic	Intergenic	-14613	NM_011349	20350	Mm.12903	NM_011349	ENSMUSG00000034684	Sema3f	Sema4|Semak	sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F	protein-coding
unique_peak1-2723-10-1-2.35641534500877-2.57096726280955	chr16	92626458	92627044	+	0	NA	intron (NM_001111022, intron 5 of 6)	intron (NM_001111022, intron 5 of 6)	70823	NM_001111023	12394	Mm.4081	NM_009821	ENSMUSG00000022952	Runx1	AML1|CBF-alpha-2|Cbfa2|Pebp2a2|Pebpa2b	runt related transcription factor 1	protein-coding
unique_peak1-6202-9-8-0.0196884049619079-1.03275496310833	chr6	149260408	149260965	+	0	NA	intron (NM_026054, intron 2 of 4)	intron (NM_026054, intron 2 of 4)	2750	NM_001289662	67246	Mm.333515	NM_026054	ENSMUSG00000032712	2810474O19Rik	6720435I21Rik|AA536804|AU020969|GET|Kiaa1551	RIKEN cDNA 2810474O19 gene	protein-coding
common_peak1-8034-16-12-0.417823924126969-0.489164546851866	chr1	171183457	171184274	+	0	NA	Intergenic	MTD|LTR|MaLR	277730	NM_023284	66977	Mm.151315	NM_023284	ENSMUSG00000026683	Nuf2	2410003C07Rik|AU044112|C85691|Cdca1|NUF2R	NUF2, NDC80 kinetochore complex component, homolog (S. cerevisiae)	protein-coding
common_peak2-27202-24-57--1.06477109235986-2.49326259230166	chr3	38484045	38485049	+	0	NA	Intergenic	Intergenic	-100809	NM_001167883	99696	Mm.290937	NM_001033198	ENSMUSG00000044864	Ankrd50	AI662170|E430012K20Rik|mKIAA1223|mKIAA3019	ankyrin repeat domain 50	protein-coding
unique_peak2-37467-2-6--1.72480917832092-1.26211192963361	chr5	140705763	140706238	+	0	NA	intron (NM_010752, intron 10 of 17)	intron (NM_010752, intron 10 of 17)	91506	NM_010752	17120	Mm.27250	NM_010752	ENSMUSG00000029554	Mad1l1	AI173502|AW550425|Mad1	MAD1 mitotic arrest deficient 1-like 1	protein-coding
common_peak2-19757-9-12--0.510826311736872-0.394412252720706	chr1	77462400	77463089	+	0	NA	intron (NM_007936, intron 3 of 17)	intron (NM_007936, intron 3 of 17)	30599	NR_105770	102465180		NR_105770		Mir6352	mmu-mir-6352	microRNA mir-6352	ncRNA
unique_peak1-3961-8-4-0.683294323060208-1.21878474469819	chr2	30897326	30897830	+	0	NA	intron (NM_001038700, intron 9 of 14)	intron (NM_001038700, intron 9 of 14)	54442	NM_001177650	14269	Mm.52297	NM_019406	ENSMUSG00000075415	Fnbp1	1110057E06Rik|2210010H06Rik|FBP1|Fbp17	formin binding protein 1	protein-coding
unique_peak1-1023-23-6-1.91441258245148-3.22740510021752	chr11	75254179	75255078	+	0	NA	3' UTR (NM_138950, exon 10 of 10)	3' UTR (NM_138950, exon 10 of 10)	-1625	NM_008878	18816	Mm.279733	NM_008878	ENSMUSG00000038224	Serpinf2	AI747498|Pli|Serpimf2	serine (or cysteine) peptidase inhibitor, clade F, member 2	protein-coding
unique_peak1-1780-7-1-1.79909083029819-1.80617997398389	chr14	7827412	7827799	+	0	NA	Intergenic	MTC|LTR|MaLR	32358	NM_001164727	100038847	Mm.443041	NM_001164727	ENSMUSG00000093985	Gm10406	ENSMUSG00000072735	predicted gene 10406	protein-coding
unique_peak2-37458-1-17--3.79698201165906-4.46429741251234	chr5	73367464	73368185	+	0	NA	3' UTR (NM_001113423, exon 8 of 8)	3' UTR (NM_001113423, exon 8 of 8)	-30319	NM_173403	231290	Mm.491387	NM_173403		Slc10a4	E130304D01	solute carrier family 10 (sodium/bile acid cotransporter family), member 4	protein-coding
common_peak1-17388-47-40-0.577289420148464-1.25612039445446	chr7	139247227	139248662	+	0	NA	intron (NM_018867, intron 10 of 13)	RSINE1|SINE|B4	89801	NM_173410	233919	Mm.208740	NM_173410		Gpr26	9630036A11Rik|A730021D22	G protein-coupled receptor 26	protein-coding
common_peak2-27930-15-17--0.157760250886656-0.307611222530528	chr4	16013832	16014589	+	0	NA	Intergenic	(TCCCC)n|Simple_repeat|Simple_repeat	-73186	NM_145950	209212	Mm.46455	NM_145950	ENSMUSG00000041153	Osgin2	BC010311|C230027H09Rik	oxidative stress induced growth inhibitor family member 2	protein-coding
unique_peak2-39838-1-6--2.43441193227435-1.56314192529759	chrX	52898518	52898997	+	0	NA	Intergenic	MMERVK10C-int|LTR|ERVK	93984	NM_001220497	100039055	Mm.380174	NM_001220497		Gm16404	EG625711	predicted gene 16404	protein-coding
unique_peak1-6610-24-8-1.6232849013254-2.85636458546265	chr8	106609556	106610839	+	0	NA	Intergenic	ORR1A2|LTR|MaLR	-15328	NM_009868	12562	Mm.21767	NM_009868	ENSMUSG00000031871	Cdh5	7B4|AA408225|Cd144|VE-Cad|VECD|VEcad|Vec	cadherin 5	protein-coding
common_peak2-31488-38-31-0.57145265929853-1.10165134406427	chr8	106611686	106613037	+	0	NA	Intergenic	RLTR13D1|LTR|ERVK	-13164	NM_009868	12562	Mm.21767	NM_009868	ENSMUSG00000031871	Cdh5	7B4|AA408225|Cd144|VE-Cad|VECD|VEcad|Vec	cadherin 5	protein-coding
unique_peak1-6563-12-1-2.64877598508764-3.36932189928148	chr7	132309178	132309643	+	0	NA	Intergenic	Intergenic	183890	NR_045804	71208	Mm.159465	NM_172408		4933440M02Rik	-	RIKEN cDNA 4933440M02 gene	ncRNA
unique_peak2-36418-2-6--1.72480917832092-1.26211192963361	chr2	128126743	128127136	+	0	NA	intron (NR_028589, intron 2 of 2)	intron (NR_028589, intron 2 of 2)	128148	NR_028591	100043424	Mm.297222	NR_028589		Gm14005	OTTMUSG00000015351	predicted gene 14005	ncRNA
common_peak2-32354-22-48--0.967425739027804-1.90173050117047	chrX	94234238	94234973	+	0	NA	Intergenic	L1Md_F3|LINE|L1	-33330	NM_001033361	245526	Mm.336164	NM_001033361	ENSMUSG00000031212	Pgr15l	-	G protein-coupled receptor 15-like	protein-coding
common_peak1-18514-46-62--0.0792839802511152-0.30814989626076	chr8	88696866	88697933	+	0	NA	Intergenic	Intergenic	332498	NM_199446	102093	Mm.237296	NM_199446	ENSMUSG00000036879	Phkb	AI463271	phosphorylase kinase beta	protein-coding
common_peak2-31045-22-38--0.638118113774844-0.887741995158868	chr8	14911049	14912258	+	0	NA	promoter-TSS (NM_001037736)	promoter-TSS (NM_001037736)	-10	NM_172751	234094	Mm.240298	NM_172751	ENSMUSG00000071176	Arhgef10	6430549H08Rik|mKIAA0294	Rho guanine nucleotide exchange factor (GEF) 10	protein-coding
common_peak1-10193-19-22--0.120874629395327-0.306080386793804	chr13	44730711	44731421	+	0	NA	Intergenic	Intergenic	-95077	NM_021878	16468	Mm.25059	NM_021878	ENSMUSG00000038518	Jarid2	Jmj|jumonji	jumonji, AT rich interactive domain 2	protein-coding
common_peak1-9442-11-31--1.49130641574839-2.45535166244229	chr11	102604371	102604942	+	0	NA	Intergenic	Intergenic	-18097	NM_009613	11488	Mm.89854	NM_009613	ENSMUSG00000020926	Adam11	AW060611|Mdc	a disintegrin and metallopeptidase domain 11	protein-coding
unique_peak1-2620-8-3-1.00522241794757-1.39487600375387	chr16	37882552	37883090	+	0	NA	3' UTR (NM_177093, exon 4 of 4)	3' UTR (NM_177093, exon 4 of 4)	14335	NM_177093	320184	Mm.390882	NM_177093	ENSMUSG00000034158	Lrrc58	1810012N18Rik|C330018J07Rik	leucine rich repeat containing 58	protein-coding
common_peak1-10665-38-53--0.183434842864938-0.354801288549198	chr14	50869812	50871386	+	0	NA	Intergenic	L1Md_A|LINE|L1	-12041	NM_146363	258360	Mm.377457	NM_146363	ENSMUSG00000048080	Olfr731	MOR246-5	olfactory receptor 731	protein-coding
unique_peak1-709-10-5-0.771452844287613-1.33892459842472	chr10	86100017	86100556	+	0	NA	Intergenic	Intergenic	-47986	NR_015572	66263	Mm.392261	NR_015572		1810014B01Rik	-	RIKEN cDNA 1810014B01 gene	pseudo
common_peak2-31987-6-10--0.894033508256995-1.21398586181642	chr9	70231365	70231789	+	0	NA	intron (NM_181072, intron 25 of 27)	intron (NM_181072, intron 25 of 27)	21983	NR_049200	100885839		NR_049200	miRBase:MI0019195	Mir5626	mmu-mir-5626	microRNA mir-5626	ncRNA
common_peak1-7788-33-18-1.08341004908194-2.15925086250253	chr1	98079247	98080325	+	0	NA	Intergenic	L1_Rod|LINE|L1	-161451	NR_040467	73454	Mm.396229	NR_040467		1700063A18Rik	-	RIKEN cDNA 1700063A18 gene	ncRNA
unique_peak1-3964-7-1-1.79909083029819-1.80617997398389	chr2	30919175	30919689	+	0	NA	intron (NM_001038700, intron 6 of 14)	intron (NM_001038700, intron 6 of 14)	32588	NM_001177650	14269	Mm.52297	NM_019406	ENSMUSG00000075415	Fnbp1	1110057E06Rik|2210010H06Rik|FBP1|Fbp17	formin binding protein 1	protein-coding
unique_peak1-5585-14-7-0.899216160357645-0.947446088118041	chr5	151053459	151053999	+	0	NA	Intergenic	Intergenic	-8776	NM_172887	320365	Mm.216590	NM_172887	ENSMUSG00000056602	Fry	13CDNA73|9330186A19Rik|AF346502|AI462658|C87180|D930046M03|cg003|mKIAA4143	furry homolog (Drosophila)	protein-coding
common_peak2-30560-2-8--2.08737925770563-1.65811743852845	chr7	78973497	78973887	+	0	NA	Intergenic	(CAAAA)n|Simple_repeat|Simple_repeat	477789	NM_001024703	244049	Mm.217412	NM_001024703	ENSMUSG00000032776	Mctp2	Gm489	multiple C2 domains, transmembrane 2	protein-coding
common_peak2-29388-75-128--0.272160263679969-0.709071670086102	chr6	47593990	47596008	+	0	NA	Intergenic	Intergenic	10094	NR_002841	19799		NR_002841		Rn4.5s	-	4.5S RNA	rRNA
unique_peak1-2352-12-7-0.648775985087639-0.697979855752659	chr15	85858707	85859434	+	0	NA	intron (NM_009886, intron 1 of 34)	intron (NM_009886, intron 1 of 34)	5137	NM_009886	12614	Mm.22680	NM_009886	ENSMUSG00000016028	Celsr1	Crsh|Scy|crash	cadherin, EGF LAG seven-pass G-type receptor 1 (flamingo homolog, Drosophila)	protein-coding
common_peak2-22151-14-20--0.493101262421116-0.456667090758524	chr12	86826135	86826788	+	0	NA	Intergenic	ID_B1|SINE|B4	11610	NM_010234	14281	Mm.246513	NM_010234	ENSMUSG00000021250	Fos	D12Rfj1|c-fos|cFos	FBJ osteosarcoma oncogene	protein-coding
unique_peak1-6027-16-8-0.948338640825749-1.02063122982878	chr6	113437807	113438626	+	0	NA	intron (NM_133930, intron 3 of 9)	intron (NM_133930, intron 3 of 9)	4653	NM_133930	171508	Mm.41593	NM_133930	ENSMUSG00000030284	Creld1	AI843811	cysteine-rich with EGF-like domains 1	protein-coding
common_peak1-15516-58-66-0.229860744432725-0.554459000578111	chr4	117124724	117127094	+	0	NA	intron (NM_025739, intron 2 of 14)	B1_Mur3|SINE|Alu	43611	NM_025739	66743	Mm.318331	NM_025739	ENSMUSG00000028677	Rnf220	4732477A13|4931406I20Rik|5730503K05Rik|AV302541	ring finger protein 220	protein-coding
unique_peak1-5945-16-2-2.53330114154691-3.78760380288747	chr6	91000619	91001390	+	0	NA	intron (NM_018815, intron 20 of 39)	L1M4|LINE|L1	65816	NM_018815	54563	Mm.28162	NM_018815	ENSMUSG00000030091	Nup210	9830001L10|AI836801|Pom210|gp190|gp210	nucleoporin 210	protein-coding
common_peak2-26066-12-15--0.351224014912361-0.332077462497413	chr2	68861839	68862460	+	0	NA	intron (NM_172856, intron 4 of 9)	L1MC2|LINE|L1	-111708	NM_181547	329416	Mm.90047	NM_181547	ENSMUSG00000034738	Nostrin	Daip2|mDaIP2	nitric oxide synthase trafficker	protein-coding
common_peak2-28111-19-17-0.232762325219374-0.392630012299441	chr4	89040230	89041035	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-83691	NM_007670	12579	Mm.423094	NM_007670	ENSMUSG00000073802	Cdkn2b	AV083695|INK4b|MTS2|p15|p15(INK4b)|p15INK4b	cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)	protein-coding
common_peak2-22235-18-22--0.210642804828661-0.321718508207525	chr13	23445161	23445983	+	0	NA	3' UTR (NM_001111107, exon 5 of 5)	3' UTR (NM_001111107, exon 5 of 5)	15505	NM_001286156	218100	Mm.286454	NM_172586	ENSMUSG00000046351	Zfp322a	Znf322|Znf322a	zinc finger protein 322A	protein-coding
common_peak1-13616-41-48-0.0864388607334519-0.335782825099843	chr2	23571117	23572384	+	0	NA	Intergenic	Intergenic	-144126	NM_001165997	76857	Mm.276415	NM_029773	ENSMUSG00000026771	Spopl	4921517N04Rik|AU014935|BB233739|E430033K04Rik	speckle-type POZ protein-like	protein-coding
unique_peak1-6893-9-9--0.132314688483142-1.03275496310833	chr8	94788326	94788957	+	0	NA	Intergenic	(TTTTG)n|Simple_repeat|Simple_repeat	91378	NR_110452	71296	Mm.86664	NR_033641	ENSMUSG00000031736	Crnde	4933436C20Rik	colorectal neoplasia differentially expressed (non-protein coding)	ncRNA
common_peak2-24923-25-59--1.04504069026341-2.56700509083571	chr17	87281897	87283085	+	0	NA	Intergenic	Intergenic	-34197	NM_001277980	78469	Mm.67234	NM_030104	ENSMUSG00000037689	Tmem247	1700090G07Rik	transmembrane protein 247	protein-coding
common_peak1-19451-14-33--1.18824668089269-1.80321929531239	chrX	103164953	103165590	+	0	NA	3' UTR (NM_025952, exon 11 of 11)	3' UTR (NM_025952, exon 11 of 11)	-40560	NM_009530	22589	Mm.10141	NM_009530	ENSMUSG00000031229	Atrx	4833408C14Rik|AI447451|ATR2|DXHXS6677E|HP1-BP38|Hp1bp2|Hp1bp38|MRXS3|RAD54L|Rad54|XH2|Xnp|ZNF-HX	alpha thalassemia/mental retardation syndrome X-linked homolog (human)	protein-coding
unique_peak1-6034-8-1-2.00522241794757-2.05605744720049	chr6	114404641	114405156	+	0	NA	intron (NM_001252643, intron 2 of 2)	intron (NM_001252643, intron 2 of 2)	51238	NM_001252643	15465	Mm.333327	NM_008285	ENSMUSG00000053004	Hrh1	Bphs|H1R|HH1R|Hir	histamine receptor H1	protein-coding
common_peak2-27252-10-36--1.85303802062018-3.68843956647705	chr3	54692748	54693430	+	0	NA	Intergenic	Intergenic	26720	NM_177854	329641	Mm.51187	NM_177854	ENSMUSG00000056306	Sertm1	6030405A18Rik	serine rich and transmembrane domain containing 1	protein-coding
common_peak2-19633-70-60-0.689229578812512-2.30518001265737	chr1	39367319	39368557	+	0	NA	intron (NM_008719, intron 5 of 20)	intron (NM_008719, intron 5 of 20)	-56758	NM_053257	114641	Mm.379302	NM_053257	ENSMUSG00000073702	Rpl31	-	ribosomal protein L31	protein-coding
common_peak1-11247-28-20-0.660641697042702-1.00055860626307	chr15	80024500	80025777	+	0	NA	intron (NM_010795, intron 1 of 1)	intron (NM_010795, intron 1 of 1)	20987	NM_010795	17309	Mm.299693	NM_010795	ENSMUSG00000042428	Mgat3	1110038J12Rik|AI848272|GnT-III	mannoside acetylglucosaminyltransferase 3	protein-coding
common_peak1-10099-23-17-0.551842503066768-0.713114929964887	chr13	24937179	24937935	+	0	NA	intron (NM_001081051, intron 1 of 20)	intron (NM_001081051, intron 1 of 20)	557	NM_001081051	210108	Mm.261514	NM_001081051	ENSMUSG00000006711	D130043K22Rik	4930451E12Rik|Kiaa0319	RIKEN cDNA D130043K22 gene	protein-coding
unique_peak1-1746-8-5-0.420259917226415-1.10484139239135	chr13	104094984	104095485	+	0	NA	intron (NM_175171, intron 1 of 28)	MIRb|SINE|MIR	29338	NM_175171	328329	Mm.202606	NM_175171	ENSMUSG00000034751	Mast4	4930420O11Rik|AI642422|mKIAA0303	microtubule associated serine/threonine kinase family member 4	protein-coding
common_peak1-12936-55-33-1.11715702990236-3.80128259545511	chr19	9058773	9061520	+	0	NA	Intergenic	Intergenic	-3628	NR_104460	66395	Mm.203866	NM_009643	ENSMUSG00000069833	Ahnak	DY6	AHNAK nucleoprotein (desmoyokin)	protein-coding
unique_peak2-36950-6-5--0.0195643903408542-0.947717972411649	chr3	107939711	107940222	+	0	NA	intron (NM_010306, intron 1 of 8)	B1_Mur2|SINE|Alu	9104	NM_010306	14679	Mm.271703	NM_010306	ENSMUSG00000000001	Gnai3	AI158965|AW537698|Galphai3|Gnai-3	guanine nucleotide binding protein (G protein), alpha inhibiting 3	protein-coding
common_peak2-24816-8-7-0.00522241794757061-1.00793137938329	chr17	70845984	70846376	+	0	NA	intron (NM_027712, intron 1 of 9)	Lx9|LINE|L1	-25270	NM_001128180	224997	Mm.311840	NM_027712	ENSMUSG00000003279	Dlgap1	4933422O14Rik|9630002F18|AI845682|AI848168|BB075781|D17Bwg0511e|GKAP/SAPAP|GKPA/SAPAP|Gkap|Sapap1|mKIAA4162	discs, large (Drosophila) homolog-associated protein 1	protein-coding
unique_peak1-3686-14-8-0.729291158915332-0.771068449301682	chr19	42694065	42694691	+	0	NA	Intergenic	Intergenic	-7082	NM_053083	67573	Mm.178767	NM_053083	ENSMUSG00000025185	Loxl4	4833426I20Rik|Loxc	lysyl oxidase-like 4	protein-coding
common_peak2-19966-61-88--0.0929841012170574-0.33278119357548	chr1	133130354	133132174	+	0	NA	intron (NM_018750, intron 1 of 5)	intron (NM_018750, intron 1 of 5)	10491	NM_018750	54354	Mm.248291	NM_018750	ENSMUSG00000026430	Rassf5	1300019G20Rik|AU042887|Maxp1|Nore1|Nore1A|Nore1B|Rapl	Ras association (RalGDS/AF-6) domain family member 5	protein-coding
unique_peak2-33190-4-6--0.830815435910851-0.989110657569874	chr10	99244814	99245176	+	0	NA	Intergenic	Intergenic	-22703	NM_027945	71832	Mm.483162	NM_027945	ENSMUSG00000046934	Csl	1700007H16Rik	citrate synthase like	protein-coding
unique_peak1-1275-9-1-2.18961340640422-2.31132995230379	chr11	117936092	117936694	+	0	NA	intron (NM_001167746, intron 44 of 80)	intron (NM_001167746, intron 44 of 80)	54140	NM_001167746	69926	Mm.473893	NM_001167746	ENSMUSG00000033987	Dnah17	2810003K23Rik|Dnahc17|Dnahcl1|Gm1178|mKIAA3028	dynein, axonemal, heavy chain 17	protein-coding
common_peak2-30973-19-15-0.402687326661686-0.519193887192487	chr8	3278944	3279559	+	0	NA	5' UTR (NM_010568, exon 1 of 21)	5' UTR (NM_010568, exon 1 of 21)	366	NM_010568	16337	Mm.268003	NM_010568	ENSMUSG00000005534	Insr	4932439J01Rik|CD220|D630014A15Rik|IR|IR-A|IR-B	insulin receptor	protein-coding
common_peak1-12469-10-23--1.22854715571239-1.44380006500971	chr17	84106701	84107224	+	0	NA	intron (NM_001171053, intron 1 of 13)	B1_Mur4|SINE|Alu	1459	NM_001171052	116871	Mm.277668	NM_054082	ENSMUSG00000055817	Mta3	1110002J22Rik|mKIAA1266	metastasis associated 3	protein-coding
common_peak2-21935-16-12-0.417823924126969-0.489164546851866	chr12	25182577	25183207	+	0	NA	promoter-TSS (NM_020614)	promoter-TSS (NM_020614)	-554	NM_020614	21340	Mm.39082	NM_020614	ENSMUSG00000059669	Taf1b	4930408G01Rik|A230108M10Rik|TAFI68|Tafi86	TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B	protein-coding
common_peak2-30550-42-31-0.742329327867184-1.66944648069025	chr7	73607299	73608636	+	0	NA	Intergenic	Lx8|LINE|L1	-35604	NM_053080	56847	Mm.140988	NM_053080	ENSMUSG00000015134	Aldh1a3	ALDH6|RALDH3|V1	aldehyde dehydrogenase family 1, subfamily A3	protein-coding
common_peak2-22167-9-7-0.18961340640422-1.05908390183068	chr12	91667985	91668432	+	0	NA	Intergenic	L1Md_F2|LINE|L1	308670	NM_010050	13371	Mm.21389	NM_010050	ENSMUSG00000007682	Dio2	5DII|AI324267|DIOII	deiodinase, iodothyronine, type II	protein-coding
common_peak2-25128-25-26-0.106962403181638-0.336580821310522	chr18	39397361	39398323	+	0	NA	intron (NM_175164, intron 14 of 22)	L1ME1|LINE|L1	245043	NM_175164	71302	Mm.329396	NM_175164	ENSMUSG00000036452	Arhgap26	1810044B20Rik|2610010G17Rik|4933432P15Rik|AI853435|mKIAA0621	Rho GTPase activating protein 26	protein-coding
common_peak2-30302-13-11-0.193509529916613-0.379391706698377	chr7	19665599	19666263	+	0	NA	exon (NM_010058, exon 3 of 5)	exon (NM_010058, exon 3 of 5)	-3267	NM_032418	13400	Mm.6529	NM_032418	ENSMUSG00000030409	Dmpk	DM|DMK|Dm15|MDPK|MT-PK	dystrophia myotonica-protein kinase	protein-coding
common_peak1-17378-42-60--0.188408009695703-0.369634502458893	chr7	118242559	118243676	+	0	NA	Intergenic	Intergenic	-16573	NM_013507	13690	Mm.185453	NM_013507	ENSMUSG00000005610	Eif4g2	AA589388|DAP-5|E130105L11Rik|Nat1|Natm1|p97	eukaryotic translation initiation factor 4, gamma 2	protein-coding
unique_peak2-34585-7-16--1.28837201095215-1.08658567012551	chr14	69487451	69488346	+	0	NA	Intergenic	L1_Mus2|LINE|L1	-159448	NM_009285	20855	Mm.20911	NM_009285	ENSMUSG00000014813	Stc1	Stc	stanniocalcin 1	protein-coding
common_peak1-19330-8-14--0.901668177660948-0.660903317613906	chrX	70385294	70385747	+	0	NA	intron (NM_001025383, intron 3 of 3).2	intron (NM_001025383, intron 3 of 3).2	3243	NM_001025383	574404	Mm.481740	NM_001025383	ENSMUSG00000067771	Gm14685	-	predicted gene 14685	protein-coding
common_peak2-28063-8-9--0.316705676939792-1.03275496310833	chr4	62501969	62502458	+	0	NA	Intergenic	B3A|SINE|B2	-124395	NM_028326	72701	Mm.26479	NM_028326	ENSMUSG00000028358	Zfp618	2810031P15Rik|2810040O04Rik|AI415580|AI505139|D430033D05Rik|Nedd10|Znf618|bM257P7.1	zinc finger protein 618	protein-coding
unique_peak2-36949-5-7--0.704380336005853-1.01466476204226	chr3	107740419	107740851	+	0	NA	Intergenic	Intergenic	-5972	NM_026672	68312	Mm.458189	NM_026672	ENSMUSG00000004035	Gstm7	0610005A07Rik|AI894236|Cd203c	glutathione S-transferase, mu 7	protein-coding
common_peak2-32382-29-39--0.209638014272252-0.348003640999435	chrX	112311194	112311980	+	0	NA	Intergenic	L1_Mus3|LINE|L1	290396	NM_001081661	75097	Mm.50414	NM_001081661	ENSMUSG00000047079	Ube2dnl2	4930524E20Rik	ubiquitin-conjugating enzyme E2D N-terminal like 2	protein-coding
common_peak1-18781-9-3-1.18961340640422-1.57096726280955	chr8	128271865	128272537	+	0	NA	TTS (NM_025636)	TTS (NM_025636)	14098	NM_025636	66566	Mm.25296	NM_025636	ENSMUSG00000031851	Ntpcr	2310079N02Rik|AI449709	nucleoside-triphosphatase, cancer-related	protein-coding
common_peak1-11532-9-8-0.0196884049619079-1.03275496310833	chr16	4602771	4603294	+	0	NA	intron (NM_031184, intron 1 of 6)	ID_B1|SINE|B4	8319	NM_031184	83396	Mm.134072	NM_031184	ENSMUSG00000014303	Glis2	Gli5|Klf16|Nkl	GLIS family zinc finger 2	protein-coding
unique_peak1-2547-9-4-0.867685311516858-1.36011389749466	chr16	23463457	23464135	+	0	NA	intron (NM_008555, intron 11 of 15)	intron (NM_008555, intron 11 of 15)	34590	NM_001004151	239766	Mm.208751	NM_001004151	ENSMUSG00000033383	Rtp1	Gm1766|Gm604	receptor transporter protein 1	protein-coding
unique_peak1-405-10-0-3.35641534500877-3.31132995230379	chr1	156366229	156366451	+	0	NA	intron (NM_009782, intron 7 of 46)	intron (NM_009782, intron 7 of 46)	206710	NM_009782	12290	Mm.267517	NM_009782	ENSMUSG00000004110	Cacna1e	A430040I15|BII|Cach6|Cacnl1a6|Cav2.3|Cchra1|alpha1E	calcium channel, voltage-dependent, R type, alpha 1E subunit	protein-coding
unique_peak2-35680-12-28--1.20920501003993-1.52081014994907	chr18	14783197	14784055	+	0	NA	TTS (NM_009280)	TTS (NM_009280)	57797	NM_001161369	268996	Mm.31761	NM_009280	ENSMUSG00000037013	Ss18	D130059H17|Ssxt|Syt	synovial sarcoma translocation, Chromosome 18	protein-coding
common_peak1-13276-38-43-0.112021040661233-0.360715883817177	chr19	37434260	37435694	+	0	NA	Intergenic	Intergenic	-15916	NM_010615	16551	Mm.42203	NM_010615	ENSMUSG00000012443	Kif11	Eg5|Kif8|Kifl1|Knsl1	kinesin family member 11	protein-coding
common_peak1-9754-50-61-0.0867440060920774-0.34378656500321	chr12	52604308	52605215	+	0	NA	Intergenic	Intergenic	-89567	NM_007728	12810	Mm.21325	NM_007728	ENSMUSG00000020953	Coch	AW122937|Coch-5B2|D12H14S564E	coagulation factor C homolog (Limulus polyphemus)	protein-coding
unique_peak2-35456-8-6-0.197867495889966-1.03789460276074	chr17	35994706	35994996	+	0	NA	3' UTR (NM_001010833, exon 16 of 16)	3' UTR (NM_001010833, exon 16 of 16)	-3412	NM_134122	106582	Mm.390992	NM_134122	ENSMUSG00000059791	Nrm	2610307M02Rik|AI429796	nurim (nuclear envelope membrane protein)	protein-coding
common_peak1-15106-77-132--0.270755855945192-0.735924665659996	chr3	133542974	133545408	+	0	NA	Intergenic	Intergenic	-336837	NM_001040400	214133	Mm.347816	NM_145989	ENSMUSG00000040943	Tet2	Ayu17-449|E130014J05Rik|mKIAA1546	tet methylcytosine dioxygenase 2	protein-coding
common_peak1-13746-14-16--0.188246680892695-0.308035960714963	chr2	32756921	32757666	+	0	NA	intron (NM_146119, intron 1 of 13)	intron (NM_146119, intron 1 of 13)	25639	NM_146119	227737	Mm.301646	NM_146119	ENSMUSG00000026796	Fam129b	9130404D14Rik	family with sequence similarity 129, member B	protein-coding
common_peak1-17407-31-23-0.640276170091967-1.01695873136768	chr7	4792663	4793576	+	0	NA	intron (NM_001290291, intron 1 of 4)	URR1B|DNA|MER1_type	3179	NM_001290291	232813	Mm.44666	NM_172737	ENSMUSG00000053550	Shisa7	-	shisa homolog 7 (Xenopus laevis)	protein-coding
common_peak1-14085-27-48--0.623163893219973-1.00060938969219	chr2	122117728	122118711	+	0	NA	intron (NM_177610, intron 12 of 31)	intron (NM_177610, intron 12 of 31)	5682	NM_177610	214593	Mm.358846	NM_177610	ENSMUSG00000068452	Duox2	A430065P05Rik|LNOX2|NOXEF2|P138-TOX|THOX2	dual oxidase 2	protein-coding
unique_peak1-513-9-4-0.867685311516858-1.36011389749466	chr1	183441632	183442356	+	0	NA	promoter-TSS (NM_207280)	promoter-TSS (NM_207280)	-412	NM_207280	403180	Mm.220754	NM_207280	ENSMUSG00000050625	Ccdc121	6530421E24Rik|Gm755	coiled-coil domain containing 121	protein-coding
common_peak2-26641-23-29--0.185123091099438-0.336580821310529	chr2	119551588	119552555	+	0	NA	intron (NM_030112, intron 9 of 17)	intron (NM_030112, intron 9 of 17)	-16002	NM_146125	228550	Mm.65337	NM_146125	ENSMUSG00000027296	Itpka	-	inositol 1,4,5-trisphosphate 3-kinase A	protein-coding
unique_peak1-5377-21-4-2.24756117037887-3.74275476306371	chr5	99339280	99340412	+	0	NA	Intergenic	L1Md_T|LINE|L1	56388	NM_173404	110075	Mm.209571	NM_173404	ENSMUSG00000029335	Bmp3	9130206H07|9530029I04Rik	bone morphogenetic protein 3	protein-coding
unique_peak1-815-9-1-2.18961340640422-2.31132995230379	chr11	4317359	4317756	+	0	NA	intron (NM_029458, intron 7 of 10)	B1_Mus2|SINE|Alu	23528	NM_029458	75828	Mm.159592	NM_029458	ENSMUSG00000020419	Hormad2	4930529M09Rik	HORMA domain containing 2	protein-coding
unique_peak2-34709-4-8--1.19338551529556-1.21878474469819	chr15	32290824	32291218	+	0	NA	intron (NM_009154, intron 2 of 22)	RLTR18|LTR|ERVK	116453	NM_009154	20356	Mm.260374	NM_009154	ENSMUSG00000022231	Sema5a	5930434A13|9130201M22Rik|AI464145|Semaf|semF	sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A	protein-coding
common_peak1-8799-12-10-0.189344366450341-0.386243247519795	chr11	20249508	20250084	+	0	NA	Intergenic	RLTR15|LTR|ERVK	-17080	NM_018861	55963	Mm.6379	NM_018861	ENSMUSG00000020142	Slc1a4	ASCT-1|ASCT1|AW045657|SATT	solute carrier family 1 (glutamate/neutral amino acid transporter), member 4	protein-coding
common_peak2-25643-15-10-0.552733131918359-0.604422558181019	chr19	9955606	9956139	+	0	NA	intron (NM_016692, intron 10 of 17)	intron (NM_016692, intron 10 of 17)	18151	NM_016692	16319	Mm.29755	NM_016692	ENSMUSG00000024660	Incenp	2700067E22Rik|AU019509|C130081E20|C77457	inner centromere protein	protein-coding
common_peak1-9356-26-22-0.404337136101449-0.569352520859861	chr11	97415417	97416390	+	0	NA	intron (NM_018873, intron 1 of 19)	Lx5|LINE|L1	20537	NM_018873	56013	Mm.342665	NM_018873	ENSMUSG00000038453	Srcin1	P140|SNIP|mKIAA1684|p140Cap	SRC kinase signaling inhibitor 1	protein-coding
unique_peak1-5795-15-0-4.01216475055566-5.11750992628768	chr6	60828579	60829351	+	0	NA	Intergenic	L1Md_F2|LINE|L1	-49116	NM_009221	20617	Mm.17484	NM_009221	ENSMUSG00000025889	Snca	NACP|alphaSYN	synuclein, alpha	protein-coding
common_peak2-22130-17-14-0.311405742596519-0.466170754204149	chr12	85110681	85111350	+	0	NA	intron (NM_130887, intron 2 of 26)	intron (NM_130887, intron 2 of 26)	6431	NM_130887	170721	Mm.133443	NM_130887	ENSMUSG00000021223	Papln	E030033C16Rik	papilin, proteoglycan-like sulfated glycoprotein	protein-coding
unique_peak2-38249-3-5--0.998945590680433-0.96108193396963	chr6	124795950	124796295	+	0	NA	intron (NM_013534, intron 9 of 14)	intron (NM_013534, intron 9 of 14)	-5829	NM_013530	14695	Mm.68889	NM_013530	ENSMUSG00000023439	Gnb3	Gnb-3	guanine nucleotide binding protein (G protein), beta 3	protein-coding
common_peak1-14999-27-32--0.0528481684632176-0.301029995663997	chr3	108562039	108562679	+	0	NA	intron (NM_177859, intron 5 of 11)	intron (NM_177859, intron 5 of 11)	19783	NM_177859	329738	Mm.72322	NM_177859	ENSMUSG00000049565	Aknad1	4921525H12Rik	AKNA domain containing 1	protein-coding
unique_peak1-6505-9-5-0.604650905683064-1.21398586181642	chr7	116198547	116198951	+	0	NA	intron (NM_001038624, intron 3 of 5)	B4|SINE|B4	28089	NM_001038624	320360	Mm.71007	NM_178780	ENSMUSG00000048330	Ric3	E130307J04Rik	resistance to inhibitors of cholinesterase 3 homolog (C. elegans)	protein-coding
unique_peak1-4239-25-7-1.86184990534511-3.43644803111449	chr2	125791135	125792423	+	0	NA	intron (NM_001291002, intron 8 of 9)	intron (NM_001291002, intron 8 of 9)	-68615	NM_008008	14178	Mm.330557	NM_008008	ENSMUSG00000027208	Fgf7	Kgf	fibroblast growth factor 7	protein-coding
unique_peak2-39277-1-6--2.43441193227435-1.56314192529759	chr8	121893505	121893895	+	0	NA	Intergenic	Intergenic	-25092	NM_019966	56690	Mm.423037	NM_019966	ENSMUSG00000074064	Mlycd	AI324784|Mcd	malonyl-CoA decarboxylase	protein-coding
common_peak1-13922-22-18-0.399356591643819-0.549581527953406	chr2	84635803	84636724	+	0	NA	Intergenic	Intergenic	-2722	NM_019949	56791	Mm.38261	NM_019949	ENSMUSG00000027078	Ube2l6	2810489I21Rik|RIG-B|UBCH8|Ubce8|Ubcm8	ubiquitin-conjugating enzyme E2L 6	protein-coding
unique_peak2-34663-8-23--1.57974008277359-1.94520747672513	chr15	86015510	86016696	+	0	NA	5' UTR (NM_145475, exon 1 of 13)	5' UTR (NM_145475, exon 1 of 13)	468	NM_145475	223753	Mm.222685	NM_145475	ENSMUSG00000035891	Cerk	AI848610|D330016D08Rik|mKIAA1646	ceramide kinase	protein-coding
common_peak1-11261-12-6-0.841421063030034-1.58711810488664	chr15	80263707	80264294	+	0	NA	Intergenic	Intergenic	126900	NM_001163189	383075	Mm.297626	NM_001163189	ENSMUSG00000050439	Enthd1	Gm1242|Gm86	ENTH domain containing 1	protein-coding
unique_peak1-7186-8-1-2.00522241794757-2.05605744720049	chr9	63032067	63032588	+	0	NA	intron (NM_011840, intron 21 of 21)	intron (NM_011840, intron 21 of 21)	-35559	NM_001163758	207667	Mm.36349	NM_172446	ENSMUSG00000022245	Skor1	AV273001|C230094B15Rik|Corl1|Lbxcor1	SKI family transcriptional corepressor 1	protein-coding
unique_peak1-2660-16-5-1.53330114154691-1.80287260729378	chr16	52438978	52439680	+	0	NA	intron (NM_009655, intron 1 of 15)	intron (NM_009655, intron 1 of 15)	13781	NM_009655	11658	Mm.288282	NM_009655	ENSMUSG00000022636	Alcam	AI853494|BEN|CD166|DM-GRASP|MuSC|SC1	activated leukocyte cell adhesion molecule	protein-coding
unique_peak1-6902-10-3-1.35641534500877-1.75805390616669	chr8	104387341	104387870	+	0	NA	Intergenic	Intergenic	921406	NM_009866	12552	Mm.1571	NM_009866	ENSMUSG00000031673	Cdh11	Cad11	cadherin 11	protein-coding
unique_peak1-1176-23-3-2.72176750450908-4.84202874224997	chr11	100157517	100158552	+	0	NA	Intergenic	Intergenic	-23276	NM_011508	20918	Mm.13886	NM_011508	ENSMUSG00000035530	Eif1	Sui1-rs1	eukaryotic translation initiation factor 1	protein-coding
common_peak2-22596-28-42--0.373305634880635-0.53611512876719	chr13	73603540	73604809	+	0	NA	promoter-TSS (NM_145376)	promoter-TSS (NM_145376)	-657	NM_145376	210992	Mm.284649	NM_145376	ENSMUSG00000021608	Lpcat1	2900035H07Rik|Aytl2|BB137372|BC005662|C87117|LPCAT|rd11	lysophosphatidylcholine acyltransferase 1	protein-coding
common_peak1-10259-16-48--1.49644620184715-3.645822589496	chr13	55445342	55446037	+	0	NA	3' UTR (NM_025828, exon 8 of 8)	3' UTR (NM_025828, exon 8 of 8)	-14598	NM_016662	17121	Mm.20350	NM_016662	ENSMUSG00000021485	Mxd3	4631412E13Rik|Mad3|bHLHc13	Max dimerization protein 3	protein-coding
common_peak2-21527-9-13--0.617741515653384-0.459837087125828	chr11	95086007	95086608	+	0	NA	Intergenic	Intergenic	-36536	NM_053093	93670	Mm.40085	NM_053093	ENSMUSG00000020872	Tac4	AW489379|PPT-C	tachykinin 4	protein-coding
common_peak2-29710-27-45--0.532016005161777-0.779916249636879	chr6	83325934	83326776	+	0	NA	intron (NM_183138, intron 6 of 10)	RSINE1|SINE|B4	24741	NR_105793	102465194		NR_105793		Mir6374	mmu-mir-6374	microRNA mir-6374	ncRNA
unique_peak2-38167-7-17--1.37083417114412-1.23399803405144	chr6	88939155	88939841	+	0	NA	Intergenic	B2_Mm1t|SINE|B2	87253	NM_011906	24100	Mm.284480	NM_011906	ENSMUSG00000002871	Tpra1	40kDa|Gpr175|Tpra40	transmembrane protein, adipocyte asscociated 1	protein-coding
unique_peak1-747-11-2-1.92373108353046-2.32232533660526	chr10	111714582	111715103	+	0	NA	intron (NM_001025581, intron 2 of 4)	intron (NM_001025581, intron 2 of 4)	6663	NM_001025581	268345	Mm.336242	NM_001025581	ENSMUSG00000035681	Kcnc2	AW047325|B230117I07|KShIIIA|Kv3.2	potassium voltage gated channel, Shaw-related subfamily, member 2	protein-coding
unique_peak1-4520-15-9-0.690236655668294-0.732381977911291	chr3	29903311	29904040	+	0	NA	intron (NM_007963, intron 2 of 14)	intron (NM_007963, intron 2 of 14)	8451	NM_007963	14013	Mm.56965	NM_007963	ENSMUSG00000027684	Mecom	D630039M04Rik|Evi-1|Evi1|Jbo|Mds|Mds1|Mds1-Evi1|Prdm3|Znfpr1b1	MDS1 and EVI1 complex locus	protein-coding
common_peak1-10451-32-55--0.528262902837944-0.895298945923416	chr13	107890484	107891499	+	0	NA	Intergenic	Intergenic	78341	NR_015471	100040322	Mm.133867	NR_015471		3830408C21Rik	-	RIKEN cDNA 3830408C21 gene	ncRNA
common_peak2-32289-7-11--0.785871670422967-1.21681515183528	chrX	23693543	23694085	+	0	NA	Intergenic	RodERV21-int|LTR|ERV1	223925	NM_001034864	236749	Mm.296422	NM_001034864	ENSMUSG00000068113	Gm4907	EG236749	predicted gene 4907	protein-coding
unique_peak1-6373-18-2-2.7279566505072-4.01305082679061	chr7	70331401	70332355	+	0	NA	intron (NM_007390, intron 2 of 9)	intron (NM_007390, intron 2 of 9)	25534	NM_007390	11441	Mm.113464	NM_007390	ENSMUSG00000030525	Chrna7	Acra7|alpha7	cholinergic receptor, nicotinic, alpha polypeptide 7	protein-coding
common_peak2-22068-19-19-0.0807592317743238-0.322753776620787	chr12	75596449	75596953	+	0	NA	Intergenic	Intergenic	198240	NM_198866	386753	Mm.341686	NM_198866	ENSMUSG00000029878	Dbpht2	Spot2	DNA binding protein with his-thr domain	protein-coding
unique_peak1-6885-11-0-3.50869358425161-3.61235994796777	chr8	93038545	93039061	+	0	NA	Intergenic	Intergenic	-166652	NM_172913	244579	Mm.302755	NM_172913	ENSMUSG00000043668	Tox3	500-9|BC052044|C230068E13|CAGF9|Tnrc9	TOX high mobility group box family member 3	protein-coding
common_peak2-23667-48-61-0.0167308408479396-0.308035049112922	chr15	85645054	85646733	+	0	NA	exon (NM_011105, exon 1 of 1)	exon (NM_011105, exon 1 of 1)	-3766	NM_197998	72355	Mm.33706	NM_197998	ENSMUSG00000064284	Cdpf1	2210021J22Rik	cysteine rich, DPF motif domain containing 1	protein-coding
common_peak2-24692-10-7-0.356415345008769-1.12966497611638	chr17	44710780	44711215	+	0	NA	intron (NR_073425, intron 5 of 5)	intron (NR_073425, intron 5 of 5)	162128	NR_073425	12393	Mm.391013	NM_009820	ENSMUSG00000039153	Runx2	AML3|Cbf|Cbfa-1|Cbfa1|LS3|Osf2|PEBP2aA|Pebp2a1|Pebpa2a	runt related transcription factor 2	protein-coding
common_peak2-27589-26-45--0.595662863898551-0.956885677565398	chr3	101923809	101924755	+	0	NA	intron (NM_009814, intron 5 of 10)	intron (NM_009814, intron 5 of 10)	33904	NM_009814	12373	Mm.15343	NM_009814	ENSMUSG00000027861	Casq2	AA033488|AW146219|ESTM52|cCSQ	calsequestrin 2	protein-coding
unique_peak1-1086-8-4-0.683294323060208-1.21878474469819	chr11	87639094	87639590	+	0	NA	5' UTR (NM_080420, exon 1 of 13)	5' UTR (NM_080420, exon 1 of 13)	274	NM_080420	76113	Mm.41236	NM_080420	ENSMUSG00000009356	Lpo	5830499B15Rik	lactoperoxidase	protein-coding
common_peak1-14736-88-107-0.260524907007064-0.747013112338864	chr3	86141435	86142816	+	0	NA	intron (NM_030695, intron 22 of 56)	intron (NM_030695, intron 22 of 56)	113513	NM_001077687	80877	Mm.439825	NM_030695	ENSMUSG00000028080	Lrba	C80285|D3Ertd775e|Lab300|Lba	LPS-responsive beige-like anchor	protein-coding
common_peak1-19056-13-10-0.319040412000471-0.446472590016315	chr9	66988435	66989114	+	0	NA	intron (NR_045748, intron 1 of 2)	intron (NR_045748, intron 1 of 2)	7406	NR_045748	100502636	Mm.412607	NR_045748		Gm19299	-	predicted gene, 19299	ncRNA
common_peak1-10443-10-10--0.103016273628528-0.301029995663987	chr13	104036750	104037232	+	0	NA	intron (NM_175171, intron 1 of 28)	intron (NM_175171, intron 1 of 28)	87581	NM_175171	328329	Mm.202606	NM_175171	ENSMUSG00000034751	Mast4	4930420O11Rik|AI642422|mKIAA0303	microtubule associated serine/threonine kinase family member 4	protein-coding
unique_peak2-36069-11-30--1.44550272613526-2.2880788707084	chr19	53450619	53451539	+	0	NA	TTS (NM_001008542)	TTS (NM_001008542)	13984	NM_172429	76479	Mm.313687	NM_172429	ENSMUSG00000025024	Smndc1	2410004J23Rik|4933440I19Rik	survival motor neuron domain containing 1	protein-coding
common_peak1-17328-45-47-0.275395524623716-0.551726087667598	chr6	146642284	146643683	+	0	NA	Intergenic	IAPLTR2_Mm|LTR|ERVK	-30469	NM_172734	232533	Mm.322121	NM_172734	ENSMUSG00000001630	Stk38l	4930473A22Rik|B230328I19|Ndr2|Ndr54	serine/threonine kinase 38 like	protein-coding
common_peak1-17374-26-26-0.173011589994994-0.363124929330838	chr7	75415113	75416269	+	0	NA	intron (NR_040340, intron 2 of 3)	intron (NR_040340, intron 2 of 3)	-3034	NM_001013811	434197	Mm.216193	NM_001013811		Fam169b	EG434197	family with sequence similarity 169, member B	protein-coding
unique_peak2-37301-6-13--1.2419568116773-1.58711810488664	chr4	121016623	121017288	+	0	NA	Intergenic	Intergenic	-19433	NM_001033791	545677	Mm.372731	NM_001033791	ENSMUSG00000073764	Gm12888	OTTMUSG00000008911	predicted gene 12888	protein-coding
unique_peak2-35519-2-15--2.91745425626332-3.28500101358144	chr17	50378699	50379420	+	0	NA	Intergenic	RMER21B|LTR|ERV1	-49237	NM_181397	76438	Mm.41854	NM_181397		Rftn1	2310015N21Rik|AI853526	raftlin lipid raft linker 1	protein-coding
common_peak2-24778-21-39--0.752438829621127-1.08405458203116	chr17	57030824	57031554	+	0	NA	TTS (NM_022328)	TTS (NM_022328)	16133	NM_030141	78625	Mm.160106	NM_030141	ENSMUSG00000024209	1700061G19Rik	1700026H02|AI507598	RIKEN cDNA 1700061G19 gene	protein-coding
common_peak2-26812-8-10--0.454209200689727-1.078512453669	chr2	151038048	151038467	+	0	NA	Intergenic	Intergenic	-89518	NR_040747	74660	Mm.170672	NR_040747	ENSMUSG00000087609	4930442J19Rik	1700029E19Rik|Gm14152|OTTMUSG00000015807	RIKEN cDNA 4930442J19 gene	ncRNA
common_peak1-16140-20-39--0.83385331029617-1.34355844763204	chr5	73292479	73293399	+	0	NA	Intergenic	HAL1-3A_ME|LINE|L1	-12662	NM_001113423	75991	Mm.121285	NM_153567	ENSMUSG00000036087	Slain2	5033405K12Rik|8030444K12Rik|AI596370	SLAIN motif family, member 2	protein-coding
common_peak2-32103-43-55--0.024791736533901-0.301029995663988	chr9	99629183	99630588	+	0	NA	Intergenic	B2_Mm2|SINE|B2	-12199	NM_001194921	56492	Mm.386784	NM_019815		Cldn18	-	claudin 18	protein-coding
unique_peak2-32878-4-8--1.19338551529556-1.21878474469819	chr10	9637360	9637920	+	0	NA	Intergenic	RLTR10E|LTR|ERVK	-16802	NM_001081344	78808	Mm.331751	NM_030191	ENSMUSG00000019790	Stxbp5	0710001E20Rik|4930565N16Rik|AW742610|LGL3|mKIAA1006	syntaxin binding protein 5 (tomosyn)	protein-coding
common_peak1-18632-7-3-0.799090830298189-1.23214870625617	chr8	110847599	110848121	+	0	NA	Intergenic	Intergenic	260717	NR_077224	109215	Mm.65282	NR_077224		3010033K07Rik	-	RIKEN cDNA 3010033K07 gene	ncRNA
unique_peak2-39011-2-5--1.50241675698448-1.08602067057793	chr8	47936139	47936554	+	0	NA	Intergenic	Intergenic	111247	NM_008391	16363	Mm.1149	NM_008391	ENSMUSG00000031627	Irf2	9830146E22Rik|AI646973|Irf-2	interferon regulatory factor 2	protein-coding
common_peak2-30414-6-6--0.241956811677302-0.947717972411649	chr7	38230714	38231091	+	0	NA	Intergenic	Intergenic	323869	NM_172385	243937	Mm.322505	NM_172385	ENSMUSG00000043456	Zfp536	9630010P11Rik|Znf536|mKIAA0390	zinc finger protein 536	protein-coding
unique_peak2-34018-5-4--0.0263084308932156-0.909929411522249	chr12	105009732	105010075	+	0	NA	intron (NM_009246, intron 1 of 4)	intron (NM_009246, intron 1 of 4)	1940	NM_009246	20703	Mm.439695	NM_009246	ENSMUSG00000071177	Serpina1d	AI118301|Dom4|PI4|Spi1-4	serine (or cysteine) peptidase inhibitor, clade A, member 1D	protein-coding
common_peak2-30149-14-8-0.729291158915332-0.771068449301682	chr6	145905807	145906415	+	0	NA	intron (NM_010656, intron 2 of 2)	intron (NM_010656, intron 2 of 2)	23444	NM_010656	16651	Mm.49689	NM_010656	ENSMUSG00000030255	Sspn	Krag	sarcospan	protein-coding
common_peak2-21798-7-12--0.901348887842903-1.31827279259406	chr11	118355467	118355941	+	0	NA	intron (NM_001285438, intron 12 of 13)	intron (NM_001285438, intron 12 of 13)	17430	NM_172573	217364	Mm.473963	NM_172573	ENSMUSG00000033857	Engase	C130099A03|D230014K01Rik	endo-beta-N-acetylglucosaminidase	protein-coding
unique_peak1-1347-10-2-1.77145284428761-2.09384600808989	chr12	17176151	17176632	+	0	NA	Intergenic	Intergenic	7303	NM_201531	382571	Mm.40173	NM_201531	ENSMUSG00000051726	Kcnf1	Gm1182|Kv5.1	potassium voltage-gated channel, subfamily F, member 1	protein-coding
unique_peak2-39940-14-14--0.00767443525087419-0.308519316180257	chrX	126753612	126754226	+	0	NA	intron (NM_172493, intron 23 of 26)	intron (NM_172493, intron 23 of 26)	469641	NM_172493	54004	Mm.10763	NM_017398	ENSMUSG00000034480	Diap2	Dia3|Diaph2|Drf2|E430022I22Rik	diaphanous homolog 2 (Drosophila)	protein-coding
unique_peak2-36182-3-6--1.22133801201688-1.08602067057793	chr2	30177967	30178446	+	0	NA	exon (NM_198304, exon 19 of 44)	exon (NM_198304, exon 19 of 44)	36253	NM_198304	227699	Mm.330119	NM_198304	ENSMUSG00000052533	Nup188	BC025526|U89435|mKIAA0169	nucleoporin 188	protein-coding
unique_peak1-4492-8-2-1.42025991722641-1.65811743852845	chr3	131776387	131776842	+	0	NA	intron (NM_020265, intron 1 of 3)	Lx3C|LINE|L1	28358	NM_020265	56811	Mm.103593	NM_020265	ENSMUSG00000028031	Dkk2	-	dickkopf homolog 2 (Xenopus laevis)	protein-coding
unique_peak2-37650-7-12--0.901348887842903-1.31827279259406	chr5	91075106	91075602	+	0	NA	Intergenic	(GA)n|Simple_repeat|Simple_repeat	-5841	NM_028478	73246	Mm.30172	NM_028478	ENSMUSG00000029370	Rassf6	1600016B17Rik	Ras association (RalGDS/AF-6) domain family member 6	protein-coding
unique_peak1-2367-26-6-2.12054417010086-4.0937649558367	chr15	88858079	88859040	+	0	NA	intron (NM_031260, intron 22 of 26)	intron (NM_031260, intron 22 of 26)	-31597	NM_001002005	406218	Mm.483059	NM_001002005	ENSMUSG00000058441	Panx2	-	pannexin 2	protein-coding
unique_peak2-39428-7-7--0.200909169701811-0.97990265578305	chr9	44326663	44327111	+	0	NA	intron (NM_007551, intron 1 of 1)	PB1|SINE|Alu	7617	NM_007551	12145	Mm.6246	NM_007551	ENSMUSG00000047880	Cxcr5	Blr1|CXC-R5|CXCR-5|Gpcr6|MDR15	chemokine (C-X-C motif) receptor 5	protein-coding
common_peak2-31133-153-182-0.459318467836705-2.76343439563493	chr8	34804512	34807290	+	0	NA	intron (NM_010344, intron 12 of 12)	B3A|SINE|B2	-36485	NM_001167921	68153	Mm.286104	NM_026584	ENSMUSG00000031585	Gtf2e2	34kDa|AI462509|C330006J08Rik	general transcription factor II E, polypeptide 2 (beta subunit)	protein-coding
common_peak1-13428-23-3-2.72176750450908-4.84202874224997	chr19	54947712	54948684	+	0	NA	Intergenic	Intergenic	225739	NM_008149	14732	Mm.210196	NM_008149	ENSMUSG00000024978	Gpam	GPAT|GPAT1	glycerol-3-phosphate acyltransferase, mitochondrial	protein-coding
common_peak2-31189-11-10-0.0492619656143161-0.31137425193576	chr8	54610739	54611272	+	0	NA	Intergenic	Intergenic	13949	NM_001005847	11593	Mm.334535	NM_001005847	ENSMUSG00000031521	Aga	AW060726	aspartylglucosaminidase	protein-coding
common_peak1-14954-12-23--0.936186515633517-0.912223620338476	chr3	104359528	104360143	+	0	NA	Intergenic	Intergenic	-44056	NM_001025067	269473	Mm.34855	NM_001025067	ENSMUSG00000032913	Lrig2	4632419I10Rik|BB096938	leucine-rich repeats and immunoglobulin-like domains 2	protein-coding
common_peak2-26519-29-64--0.910077732413344-2.17301518846909	chr2	90940179	90941335	+	0	NA	intron (NM_011355, intron 2 of 4)	intron (NM_011355, intron 2 of 4)	3803	NM_011355	20375	Mm.1302	NM_011355		Spi1	Dis-1|Dis1|PU.1|Sfpi-1|Sfpi1|Spi-1|Tcfpu1|Tfpu.1	spleen focus forming virus (SFFV) proviral integration oncogene	protein-coding
unique_peak1-6936-11-2-1.92373108353046-2.32232533660526	chr8	108715818	108716532	+	0	NA	intron (NM_178798, intron 3 of 9)	T-rich|Low_complexity|Low_complexity	18658	NM_001007567	66432	Mm.269029	NM_001007567	ENSMUSG00000033106	Slc7a6os	2010007L18Rik|2400002F02Rik	solute carrier family 7, member 6 opposite strand	protein-coding
unique_peak2-33186-7-16--1.28837201095215-1.08658567012551	chr10	96690424	96691006	+	0	NA	Intergenic	Intergenic	192313	NR_045358	75301	Mm.108650	NR_045358		4930556N09Rik	-	RIKEN cDNA 4930556N09 gene	ncRNA
common_peak2-22170-41-60--0.229588632714226-0.425219862997755	chr12	98736869	98737989	+	0	NA	Intergenic	L1_Mus1|LINE|L1	760118	NM_008079	14420	Mm.5120	NM_008079	ENSMUSG00000021003	Galc	2310068B06Rik|A930008M05Rik|AW212969|AW413532|Gacy|twi|twitcher	galactosylceramidase	protein-coding
common_peak1-14447-17-27--0.589058583852566-0.604689589251113	chr2	181837404	181838347	+	0	NA	Intergenic	Intergenic	111944	NM_001205282	672125	Mm.489571	NM_001205282	ENSMUSG00000053277	Gm14496	OTTMUSG00000016837	predicted gene 14496	protein-coding
unique_peak1-1333-8-1-2.00522241794757-2.05605744720049	chr12	8783728	8784251	+	0	NA	intron (NM_011519, intron 1 of 4)	intron (NM_011519, intron 1 of 4)	5787	NM_011519	20969	Mm.2580	NM_011519	ENSMUSG00000020592	Sdc1	AA408134|AA409076|CD138|Sstn|Synd|Synd1|syn-1	syndecan 1	protein-coding
common_peak2-30891-24-26-0.0383224006042484-0.317118655902073	chr7	141901825	141902447	+	0	NA	intron (NM_001033420, intron 1 of 51)	intron (NM_001033420, intron 1 of 51)	39766	NM_001033420	330662	Mm.436572	NM_001033420	ENSMUSG00000058325	Dock1	9130006G06Rik|AI854900|D630004B07Rik	dedicator of cytokinesis 1	protein-coding
common_peak2-32338-28-44--0.438893976508212-0.643431604871956	chrX	74424078	74425301	+	0	NA	Intergenic	L1Md_A|LINE|L1	-331877	NM_020601	21372	Mm.258476	NM_020601	ENSMUSG00000025246	Tbl1x	5330429M20|Tbl1	transducin (beta)-like 1 X-linked	protein-coding
common_peak1-7453-29-12-1.41185036247402-2.85339697372352	chr1	75545965	75546878	+	0	NA	intron (NM_009208, intron 6 of 22)	intron (NM_009208, intron 6 of 22)	3580	NM_009208	20536	Mm.5053	NM_009208		Slc4a3	A930038D23Rik|Ae3	solute carrier family 4 (anion exchanger), member 3	protein-coding
common_peak2-29715-20-44--1.00377831173848-1.92432670720421	chr6	83571816	83573202	+	0	NA	Intergenic	Lx6|LINE|L1	33601	NM_016751	51811	Mm.3115	NM_016751	ENSMUSG00000014542	Clec4f	Clecsf13|D18063|KUCR_MOUSE|Kclr	C-type lectin domain family 4, member f	protein-coding
common_peak1-15043-20-13-0.680719862533589-0.809260849721102	chr3	122199434	122200072	+	0	NA	intron (NM_013867, intron 3 of 11)	L2b|LINE|L2	44846	NR_106117	102465764		NR_106117		Mir7657	mmu-mir-7657	microRNA mir-7657	ncRNA
unique_peak1-5871-11-4-1.18676548936425-1.68134727924692	chr6	86051769	86052327	+	0	NA	intron (NM_013458, intron 9 of 15)	intron (NM_013458, intron 9 of 15)	24006	NM_001271859	11519	Mm.104155	NM_013458		Add2	2900072M03Rik|add97	adducin 2 (beta)	protein-coding
common_peak1-10490-57-87--0.193398578558369-0.433519020835319	chr13	119790237	119791537	+	0	NA	Intergenic	L1Md_F2|LINE|L1	287381	NM_008002	14165	Mm.317323	NM_008002	ENSMUSG00000021732	Fgf10	AEY17|BB213776|Fgf-10|Gsfaey17	fibroblast growth factor 10	protein-coding
unique_peak2-36895-7-17--1.37083417114412-1.23399803405144	chr3	95871080	95871757	+	0	NA	Intergenic	B1_Mur3|SINE|Alu	-9040	NM_013841	22365	Mm.263185	NM_013841	ENSMUSG00000015747	Vps45	AI462172|AW554165|mVps45	vacuolar protein sorting 45 (yeast)	protein-coding
unique_peak1-2090-11-3-1.50869358425161-1.95434855131066	chr15	36945016	36945623	+	0	NA	Intergenic	Intergenic	-8162	NM_026521	68036	Mm.371631	NM_026521	ENSMUSG00000062397	Zfp706	3110006P09Rik|AA793007|AW536850|C77232|Znf706	zinc finger protein 706	protein-coding
common_peak1-9479-35-32-0.386976139104051-0.652627812244279	chr11	106500862	106501720	+	0	NA	Intergenic	B1_Mus2|SINE|Alu	-27047	NM_198292	21763	Mm.102407	NM_198292	ENSMUSG00000040548	Tex2	4930568E07Rik|AI553404|Def-5|Taz4	testis expressed gene 2	protein-coding
common_peak2-22269-11-15--0.491306415748387-0.435191258261915	chr13	6193235	6193802	+	0	NA	Intergenic	(CA)n|Simple_repeat|Simple_repeat	332783	NM_011803	23849	Mm.275036	NM_011803	ENSMUSG00000000078	Klf6	AI448727|BCD1|C86813|CPBP|Copeb|FM2|FM6|Ierepo1|Ierepo3|R75280|Zf9	Kruppel-like factor 6	protein-coding
common_peak2-31777-11-21--0.950738034385684-0.991115276827166	chr9	22467671	22468488	+	0	NA	intron (NM_181316, intron 16 of 21)	intron (NM_181316, intron 16 of 21)	187920	NM_178415	319845	Mm.176725	NM_178415	ENSMUSG00000035919	Bbs9	E130103I17Rik	Bardet-Biedl syndrome 9 (human)	protein-coding
unique_peak2-33964-7-14--1.10779976531033-0.817533494790411	chr12	80435002	80435637	+	0	NA	intron (NM_009014, intron 7 of 10)	RMER19B|LTR|ERVK	36981	NM_001252562	19363	Mm.341756	NM_009014	ENSMUSG00000059060	Rad51b	AI553500|R51H2|Rad51l1|mREC2	RAD51 homolog B	protein-coding
unique_peak1-141-9-5-0.604650905683064-1.21398586181642	chr1	71004793	71005328	+	0	NA	Intergenic	Intergenic	144486	NM_007525	12021	Mm.10764	NM_007525	ENSMUSG00000026196	Bard1	ENSMUSG00000060893|ENSMUSG00000073653	BRCA1 associated RING domain 1	protein-coding
common_peak2-22113-33-33-0.24387472127519-0.447010559430123	chr12	82085292	82086199	+	0	NA	Intergenic	Intergenic	-16679	NM_001177561	20493	Mm.486361	NM_011387	ENSMUSG00000021135	Slc10a1	Ntcp	solute carrier family 10 (sodium/bile acid cotransporter family), member 1	protein-coding
common_peak2-24688-8-19--1.31670567693979-1.30305656033811	chr17	44491068	44491874	+	0	NA	Intergenic	Intergenic	165950	NM_172621	224796	Mm.37666	NM_172621	ENSMUSG00000023959	Clic5	5730531E12Rik|B330005L24|Gm322|jbg	chloride intracellular channel 5	protein-coding
unique_peak1-490-15-4-1.69023665566829-1.97518968347063	chr1	179198200	179198920	+	0	NA	Intergenic	Intergenic	-19662	NM_011785	23797	Mm.235194	NM_011785	ENSMUSG00000019699	Akt3	AI851531|D930002M15Rik|Nmf350	thymoma viral proto-oncogene 3	protein-coding
common_peak1-17424-31-32-0.18084455145467-0.379775532323848	chr7	12920921	12922016	+	0	NA	Intergenic	Intergenic	-13991	NM_134209	171243	Mm.377199	NM_134209	ENSMUSG00000066804	Vmn1r83	V1rg8	vomeronasal 1 receptor 83	protein-coding
unique_peak1-6845-7-6--0.00826409175941478-0.97990265578305	chr8	84241108	84241636	+	0	NA	intron (NM_001024617, intron 3 of 24)	intron (NM_001024617, intron 3 of 24)	374911	NM_001297593	234515	Mm.324468	NM_001024617	ENSMUSG00000037940	Inpp4b	E130107I17Rik	inositol polyphosphate-4-phosphatase, type II	protein-coding
common_peak2-27419-65-81-0.134613934859043-0.403936755856314	chr3	88685195	88686539	+	0	NA	intron (NM_001242372, intron 15 of 32)	intron (NM_001242372, intron 15 of 32)	32005	NM_144898	229524	Mm.440405	NM_144898	ENSMUSG00000068922	Msto1	BC008103|mst	misato homolog 1 (Drosophila)	protein-coding
unique_peak2-33683-5-8--0.874305337448166-1.10484139239135	chr11	103028493	103028826	+	0	NA	Intergenic	B3|SINE|B2	-3793	NM_001077698	57778	Mm.138913	NM_019679	ENSMUSG00000055805	Fmnl1	8030453N10Rik|AI553564|Fmnl|Fnrl|Frls	formin-like 1	protein-coding
common_peak1-15205-8-5-0.420259917226415-1.10484139239135	chr4	35225217	35225653	+	0	NA	Intergenic	L1_Mm|LINE|L1	-52306	NM_001081343	73205	Mm.331544	NM_001081343	ENSMUSG00000028300	3110043O21Rik	AI840585	RIKEN cDNA 3110043O21 gene	protein-coding
unique_peak2-32997-3-15--2.41398308995928-2.80787975886178	chr10	60876702	60877261	+	0	NA	Intergenic	Intergenic	-3739	NM_013611	18119	Mm.57195	NM_013611	ENSMUSG00000037171	Nodal	Tg.413d	nodal	protein-coding
common_peak2-23377-11-5-0.923731083530457-1.477227296591	chr15	55693641	55694088	+	0	NA	intron (NM_016667, intron 1 of 6)	L1MCa|LINE|L1	44640	NM_016667	20649	Mm.309425	NM_016667	ENSMUSG00000060429	Sntb1	-	syntrophin, basic 1	protein-coding
common_peak2-24124-19-28--0.455293668465885-0.518921928796332	chr16	33829410	33830585	+	0	NA	5' UTR (NM_001145884, exon 1 of 15)	5' UTR (NM_001145884, exon 1 of 15)	246	NM_001145884	16419	Mm.6424	NM_010580	ENSMUSG00000022817	Itgb5	AA475909|AI874634|ESTM23|[b]-5|[b]5|[b]5A|[b]5B|beta-5|beta5	integrin beta 5	protein-coding
unique_peak2-38467-1-8--2.79698201165906-2.05605744720049	chr7	29169037	29169394	+	0	NA	Intergenic	Intergenic	-4968	NM_011756	22695	Mm.389856	NM_011756	ENSMUSG00000044786	Zfp36	Gos24|Nup475|TIS11D|TISII|Tis11|Ttp|Zfp-36	zinc finger protein 36	protein-coding
common_peak2-23251-42-96--0.857583514319944-2.88914188914785	chr15	12205032	12205903	+	0	NA	Intergenic	Intergenic	-45784	NM_025673	66629	Mm.157655	NM_025673	ENSMUSG00000022200	Golph3	4733401N08Rik|5730410D03Rik|AW413496	golgi phosphoprotein 3	protein-coding
unique_peak2-38897-6-9--0.75652998450706-1.11707584880836	chr8	11324521	11324913	+	0	NA	intron (NM_009932, intron 3 of 47)	intron (NM_009932, intron 3 of 47)	11888	NM_009932	12827	Mm.181021	NM_009932	ENSMUSG00000031503	Col4a2	Col4a-2	collagen, type IV, alpha 2	protein-coding
unique_peak1-4470-8-1-2.00522241794757-2.05605744720049	chr2	180727719	180728253	+	0	NA	intron (NM_028518, intron 4 of 35)	intron (NM_028518, intron 4 of 35)	6746	NM_028518	73368	Mm.345095	NM_028518	ENSMUSG00000016356	Col20a1	1700051I12Rik	collagen, type XX, alpha 1	protein-coding